cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25592/uhhfdm.911
title: GRK-Papyri: A Dataset of Greek Handwriting on Papyri for the Task of Writer Identification

description: Presenting actual research questions from academia through publishing datasets is a practice of great importance in order to generate relevant solutions. Therefore, we propose a dataset of handwriting on papyri for the task of writer identification. This dataset is derived directly from research questions in the field of Papyrology, and the samples are selected by experts from the respective field of research. This dataset consists of 50 handwriting samples in Greek on papyri approximately from the 6th century A.D., which belong to 10 different scribes. It is prepared and made freely available for non-commercial research along with their confirmed groundtruth information related to the task of writer identification. This paper presents not only the details of the dataset but also its relation to research questions and how the results of computational analysis can support scholars from manuscript research. Some preprocessing and experimentation results are provided as well in order to highlight the difficulties posed by the image degradation of this dataset. The research for this dataset was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany´s Excellence Strategy – EXC 2176 ‘Understanding Written Artefacts: Material, Interaction and Transmission in Manuscript Cultures’, project no. 390893796. The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg.
description: {"references": ["H. Mohammed, I. Marthot-Santaniello and V. M\u00e4rgner, \"GRK-Papyri: A Dataset of Greek Handwriting on Papyri for the Task of Writer Identification,\" 2019 International Conference on Document Analysis and Recognition (ICDAR), Sydney, Australia, 2019, pp. 726-731."]}
DOI: 10.17632/4f3mrkcxvb.5
title: Data for: Turbulence Power Spectra in Regions Surrounding Jupiter's South Polar Cyclones from Juno/JIRAM

description: The files SFT_81d7_PSD_ave&STDA, equatorward_PSD.txt and poleward_PSD.txt refer to Figure 2 and 3 respectively of the paper " Turbulence Power Spectra in Regions Surrounding Jupiter's South Polar Cyclones from Juno/JIRAM " submitted to JGR planets. They contain average power spectral densities (PSDs) from JIRAM data acquired at Jupiter's South Pole. The PSDs are computed by means of FFT applied to circular brightness scans extracted from JIRAM images. In the file SFT_81d7_PSD_ave&STDA the wavenumber bin values (column 1), the average PSD (column 2) and the error bars (column 3), related to the equatorward dataset of the Juno’s 4th perijove, are reported. The files equatorward_PSD.txt and poleward_PSD.txt refer to PSDs computed for regions equatorward and poleward the ring of cyclones at Jupiter's South Pole. In both files the first column contains the wavenumber bin values, while in column 2 to column 7 the PSDs from six Juno perijove's passes are reported. The files 170202_150120_b10sq1 and 170202_150120_b10sq2 refer to panel c of Figure 4 and 5 respectively, i.e. the zoomed in areas of the JIRAM JIR_IMG_RDR_2017033T150327 image. These data are in ENVI BSQ format, that is they are stored as a binary stream of bytes. They are accompanied by the ASCII header files 170202_150120_b10sq1.hdr and 170202_150120_b10sq2.hdr.
DOI: 10.17632/5jfsx6j75g.2
title: Trajectory data of molecular dynamics simulation of SARS-CoV-2 Main Protease and inhibitor drug candidates

description: MD simulations were performed using Desmond on supercomputer TSUBAME 3.0. The inhibitor-SARS-CoV-2 Mpro complex models were placed in the orthorhombic box with a buffer distance of 10 Å in order to create a hydration model. TIP3P water model was used for creation of the hydration model. We performed MD simulations under the NPT ensemble for 1 μs on three complex structures using OPLS3e force field.
DOI: 10.17632/79mm425n5v.1
title: Dataset for supporting a modular autoinduction device for control of gene expression in Bacillus subtilis

description: Modular and tuneable genetic tools for Metabolic Engineering fuels the development of chassis for the efficient production of biocompounds at industrial scale. We have constructed an autoinduction device for gene expression in Bacillus subtilis based on the LuxR/I quorum sensing system (“A modular autoinduction device for control of gene expression in Bacillus subtilis” [MBE_2019_419R2]). Here, we present raw and processed data regarding to B. subtilis growth measured as OD600, performed in three different scales: microcultivation on 96-well plates (200 µL), test tube (12 mL), and Erlenmeyer flask (50 mL). We also present raw and processed data on gene expression measured as GFP fluorescence (485/535 nm), luminescence and riboflavin production. Measurements were performed on a microplate reader Tecan 200 PRO (iControl software) and on spectrophotometer (Thermo Fisher Scientific GENESYS 10S UV-Vis). Processed data are presented as product/OD600, maximum and minimum promoter activity, fold of induction, and the induction OD600.
DOI: 10.17632/kz29r69y6v.1
title: Data for "Does a home team win lead to more less-educated mothers? Evidence from Korean professional baseball league"

description: Data for "Does a home team win lead to more less-educated mothers? Evidence from Korean professional baseball league"
DOI: 10.17632/x75wr72d75.1
title: Benthic Community Abundance and Biomass Data, Hale 1974, The Role of Benthic Communities in the Nutrient Cycles of an Estuary

description: These benthic community abundance and biomass data were collected in Narragansett Bay, Rhode Island, USA, as part of a Master's thesis ( Hale, Stephen. 1974. The Role of Benthic Communities in the Nutrient Cycles of an Estuary. Graduate School of Oceanography, University of Rhode Island, Narragansett, Rhode Island). Three stations were sampled in November 1973 (5 replicates), March 1974 (3 replicates), and July 1974 (3 replicates). The taxonomy file gives the taxonomy of the species collected.
DOI: 10.5281/zenodo.3760964
title: Computational insights into voltage dependence of polyamine block in a strong inwardly rectifying K+ channel

description: Supplemental Material to the study "<em>Computational insights into voltage dependence of polyamine block in a strong inwardly rectifying K<sup>+</sup> channel</em>", to be published in <em>Frontiers in Pharmacology</em>. The upload contains (1) a representative trajectory (run4), and (2) two frames of the SPM inward-pulling simulations: (1) Free MD run4 with outward driving force, containing the compressed .xtc, the .tpr, and the final step as .gro file (2) steered MD, containing the starting frame (SPM in the central cavity below the Selectivity Filter) and a representative frame of SPM interacting with the CTD-binding site.
description: Grants: Austrian Science Fund: Molecular Drug Targets (W 1232)
DOI: 10.5281/zenodo.3760965
title: Computational insights into voltage dependence of polyamine block in a strong inwardly rectifying K+ channel

description: Supplemental Material to the study "<em>Computational insights into voltage dependence of polyamine block in a strong inwardly rectifying K<sup>+</sup> channel</em>", to be published in <em>Frontiers in Pharmacology</em>. The upload contains (1) a representative trajectory (run4), and (2) two frames of the SPM inward-pulling simulations: (1) Free MD run4 with outward driving force, containing the compressed .xtc, the .tpr, and the final step as .gro file (2) steered MD, containing the starting frame (SPM in the central cavity below the Selectivity Filter) and a representative frame of SPM interacting with the CTD-binding site.
description: Grants: Austrian Science Fund: Molecular Drug Targets (W 1232)
DOI: 10.5519/qd.is2womsy
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.17632/9nck2z26tf.1
title: STING gain-of-function disrupts lymph node organogenesis and innate lymphoid cell differentiation in mice. Bennion et al

description: STING gain-of-function causes autoimmunity and immunodeficiency in mice. Here, we report that STING gain-of-function also prevents development of lymph nodes and Peyer’s patches. Absence of secondary lymphoid organs is associated with diminished numbers of ILCs, including RORT-positive lymphoid tissue inducer (LTi) cells. Whereas wild-type (WT) 47+ progenitors differentiate efficiently into LTi cells, STING gain-of-function progenitors do not. STING gain-of-function impairs differentiation of all types of ILCs, but has the greatest effect on ILC3s. Patients with STING gain-of-function have fewer ILCs, but still have lymph nodes, indicating species-specific effects. In mice, expression of the STING mutant specifically in RORT-positive lineages prevents development of lymph nodes, and reduces numbers of ILC3s including LTi cells. RORT lineage-specific expression of STING gain-of-function also causes lung disease. Since RORT is expressed exclusively in LTi cells during development, our findings suggest that STING gain-of-function prevents lymph node development by reducing LTi cell numbers in mice.
DOI: 10.17632/vvf2krycms.1
title: Skin adhesive as an adjunct in total joint arthroplasty; a retrospective cohort study

description: Background: Surgical site infection (SSI) after lower limb total joint arthroplasty (TJA) is a complication that is associated with increased morbidity and mortality. A retrospective study was carried out to compare standard wound closure with and without skin adhesive. Method: The wound surveillance data of 408 patients who underwent either a hip or knee arthroplasty between 1st March 2016 and 31st October 2018 inclusive were retrospectively reviewed at our institution, a big tertiary teaching hospital at Salford Royal Hospital (Manchester, United Kingdom). The patients had undergone a primary elective lower limb arthroplasty. These patients were selected from the Sunrise electronic patient records (EPR). Inclusion criteria was more than 18 years of age. Results: 34 patients were diagnosed with a SSI (8.33%). Exact Fisher test showed that there is a statistical difference in the incidence of SSI after lower limb TJA when skin adhesive is used (p= 0.0016). The 2 cohorts of patients (skin adhesive cohort versus non-skin adhesive cohort) were not statistically different (p&gt;0.05) in terms of age, BMI and duration of surgery. Conclusion: The incidence of SSI was found to be very high compared to the incidence reported in the literature. The high statistical significance shows that the use of skin adhesive in wound closure considerably reduces SSI and therefore, its use should be recommended.
DOI: 10.17632/wdzhy6th5r.2
title: Roughness data of internal and external surfaces produced through EBM technique
DOI: 10.5281/zenodo.3761167
title: Electron number density and DM density along random lines of sight from the EAGLE simulation

description: Here we present the electron number density and the dark matter (DM) density along random lines of sight (LOS) extracted from the EAGLE simulation. The data sets contain two types of LOS - with the cross sections \(25\times20\text{ ckpc}^2\) and \(250\times25\text{ ckpc}^2\)(ckpc is comoving kpc). The datasets contain snapshots of the electron number density at \(23\) different redshift points \(z_i\), \(0\le z_i \le 6\) and \(37\) snapshots of the DM density for \(0\le z_i\le125\). At each \(z_i\) there are data for \(100\) random LOS (of each type), having comoving length \(100\text{ cMpc}\) and containing \(5000\) data points each. In addition to the raw data we provide a Wolfram Mathematica notebook <strong>LOS.nb</strong>, that gives examples of usage, namely: Construction the continuous lines of sight for electron number density or DM density; Calculation the resonant conversion probability between dark photon and usual photon along the LOS; Production of the signal in the model where DM decays into dark photons that are later converted into usual photons. The details of extraction procedure and LOS properties, as well as physical result in the example models are discussed in the paper [2003.10465]. Please cite this paper if you use data published here. <em>To get started download all files in one folder and run the Mathematica notebook.</em> Changes in v2: Bug with names of data files was corrected. Minor changes in LOS.nb
description: The work is supported by the National Science Foundation under Grant No. NSF PHY-1748958. AS and JP are supported by the New Frontiers program of the Austrian Academy of Sciences. KB is supported by the European Research Council (ERC) Advanced Grant ``NuBSM'' (694896).
DOI: 10.3886/e115401v1-23865
title: Psychometric study of the Flow State Scale-2

description: The data are refered to the Flow State Scale-2 applied to musicians. This instrument has been used in different languages, mainly in the field of sport. In this research work, the FSS-2 has been translated into Spanish and administered to 486 musicians from different regions of Spain in order to examine the psychometric properties.
description: Response Rates: likert scale from 0 (totally disagree) to 10 (totally agree)
description: Presence of Common Scales: likert scale from 0 (totally disagree) to 10 (totally agree)
description: mail questionnaire; mixed mode; web-based survey;
description: adults musicians. Smallest Geographic Unit: spain
description: 486 participants
DOI: 10.5281/zenodo.3760979
title: PortLib Instances for the Port Scheduling Problem.

description: In the following we present the <em>PortLib</em> instances for the <em>Port Scheduling Problem</em> (PSP), which have been presented in the paper <em>An Adaptive Large Neighbourhood Search Heuristic for Routing and Scheduling Feeder Vessels in Multi-terminal Ports,</em> written by Erik Hellsten, David Sacramento and David Pisinger. The PSP represents a new scheduling problem for feeder vessels in multi-terminal ports, which has been defined in close collaboration with the industry. The proposed problem is a General Shop-like problem, and it accounts for most of the practical restrictions faced by the carriers in scheduling the operations. Given a fleet of feeder vessels, which each of them has a number of operations to perform at different terminals, and each terminal can only serve one vessels at a time, the task is to define an operational schedule, i.e. a starting time for each operation, which satisfies the time window and precedence constraints as well as minimises the departure times of the vessels and packs the schedule as tight as possible. The instances are named <strong>PSP.</strong><strong>n.m.r</strong>, where <strong>n</strong> is the number of container-terminals, <strong>m</strong> is the number of vessels, and <strong>r</strong> is the generic name of the scenario. The instances are randomly generated to be realistic, but in addition we ensured that each instance has a feasible solution as well as strove towards that each constraint should have a significant impact. In general, the instances are made to be slightly harder to solve than the problems faced by industry, in order to properly challenge the developed methods, as well as spurring further development.
DOI: 10.25345/c5gh69
title: MassIVE MSV000085323 - Sargassum from Lombok an Indonesia's ocean
title: Sargassum has been collected from Indonesia's Sea in January 2020
DOI: 10.5281/zenodo.3762572
title: HILOFIT Database

description: HILOFIT Database
DOI: 10.5281/zenodo.3762573
title: HILOFIT Database

description: HILOFIT Database
DOI: 10.7910/dvn/lejuqz/dynzpa
title: Codebook.docx

description: Codebook
DOI: 10.7910/dvn/lejuqz/ink8bl
title: AgreementScoresAll_Apr2020.csv

description: Undirected dyadic data with agreement scores and ideal point distance
DOI: 10.7910/dvn/lejuqz/u4ttv6
title: AgreementScoresAll_Apr2020.Rdata

description: Undirected dyads, agreement scores and ideal point distances
DOI: 10.7910/dvn/lejuqz/wu1mch
title: IdealpointestimatesAll_Apr2020.tab

description: Country-year (session) data with ideal point estimates and credible intervals
DOI: 10.5281/zenodo.3600533
title: The northern terminus of Cascadia subduction - Supporting data

description: This repository contains the seismic tomography data for the nearshore inversion presented in the manuscript "The northern terminus of Cascadia subduction", submitted to the Journal of Geophysical Research: Solid Earth. Vp, Vs and Vp/Vs velocities are in "nvi_final_model_velocities.dat" and earthquake relocations in "nvi_final_model_relocations.dat". MATLAB scripts and data files are provided for plotting horizontal slices through the final model, the checkerboard models and the synthetic recovery test models that are presented in the paper's Supporting Information. These scripts require the MATLAB Mapping Toolbox. For questions and requests, please email the first author at genevieve.savard@ucalgary.ca.
DOI: 10.5281/zenodo.3600534
title: The northern terminus of Cascadia subduction - Supporting data

description: This repository contains the seismic tomography data for the nearshore inversion presented in the manuscript "The northern terminus of Cascadia subduction", submitted to the Journal of Geophysical Research: Solid Earth. Vp, Vs and Vp/Vs velocities are in "nvi_final_model_velocities.dat" and earthquake relocations in "nvi_final_model_relocations.dat". MATLAB scripts and data files are provided for plotting horizontal slices through the final model, the checkerboard models and the synthetic recovery test models that are presented in the paper's Supporting Information. These scripts require the MATLAB Mapping Toolbox. For questions and requests, please email the first author at genevieve.savard@ucalgary.ca.
DOI: 10.5281/zenodo.3762243
title: Mutant phenotypes of candidate genes from Fv'/Fm' and QY max loci identified using GWAS in Arabidopsis HapMap population

description: The phenotypes of T-DNA insertion lines and background line (Col-0), located in the loci identified using GWAS, corresponding to maximum quantum yield (QY max) and light-adapted quantum yield (Fv'/Fm') under salt stress. The data was collected using high-throughput phenotyping of plants and is part of a manuscript currently in preparation.
DOI: 10.5281/zenodo.3762244
title: Mutant phenotypes of candidate genes from Fv'/Fm' and QY max loci identified using GWAS in Arabidopsis HapMap population

description: The phenotypes of T-DNA insertion lines and background line (Col-0), located in the loci identified using GWAS, corresponding to maximum quantum yield (QY max) and light-adapted quantum yield (Fv'/Fm') under salt stress. The data was collected using high-throughput phenotyping of plants and is part of a manuscript currently in preparation.
DOI: 10.17632/c4gphnbtts.2
title: Data for: Synthesis of earthworm trace metal uptake and bioaccumulation data: role of soil concentration, earthworm ecophysiology, and experimental design

description: Earthworm trace metal concentration, soil concentration, and bioaccumulation factors for 56 studies. Experimental conditions, treatments, and soil data provided as possible.
DOI: 10.17632/hswn9y67rn.1
title: The Importance of Conference Proceedings in Research Evaluation: a Methodology Based on Scimago Journal Rank (SJR)

description: Conferences are an essential tool for scientific communication. In disciplines such as Computer Science, over 50% of original research results are published in conference proceedings. In this dataset, there is is a list of conference proceedings, categorized Q1 - Q4 by analogy with SJR journal quartiles. We have analyzed the role of conference proceedings in various disciplines and propose an alternative approach to research evaluation based on conference proceedings and Scimago Journal Rank (SJR). Comparison of the resulting list in Computer Science with the CORE ranking showed a 62% match, as well as an average rank correlation of the distribution by category.
DOI: 10.5281/zenodo.3762277
title: Organic and Inorganic Nutrients in the North Pacific from the 2016 cruise KOK1606 (Gradients 1)

description: Data on organic and inorganic nutrients in unfiltered seawater that was sampled aboard the Gradients 1 cruise (KOK1606) in April/May 2016 along a transect from Hawaii to 37 degrees north along a longitude of 158 degrees west. Seawater was collected into HDPE or polypropylene bottles and immediately frozen. Silicate, phosphate, nitrate+nitrite and ammonium are determined colormetrically on a SEAL Analytical Autoanalyzer (AA3 with HR detectors), with the exception of nitrate+nitrite that is &lt;0.5umol/L, which is analyzed by chemiluminescence. Total organic carbon is determined by combustion on a Shimadzu TOC-V analyzer.
DOI: 10.5281/zenodo.3762278
title: Organic and Inorganic Nutrients in the North Pacific from the 2016 cruise KOK1606 (Gradients 1)

description: Data on organic and inorganic nutrients in unfiltered seawater that was sampled aboard the Gradients 1 cruise (KOK1606) in April/May 2016 along a transect from Hawaii to 37 degrees north along a longitude of 158 degrees west. Seawater was collected into HDPE or polypropylene bottles and immediately frozen. Silicate, phosphate, nitrate+nitrite and ammonium are determined colormetrically on a SEAL Analytical Autoanalyzer (AA3 with HR detectors), with the exception of nitrate+nitrite that is &lt;0.5umol/L, which is analyzed by chemiluminescence. Total organic carbon is determined by combustion on a Shimadzu TOC-V analyzer.
DOI: 10.15468/q8wdkx
title: Revision of the aperturally dentate Charopidae (Gastropoda: Stylommatophora) of southern Africa - genus Afrodonta s. lat., with description of five new genera, twelve new species and one new subspecies

description: This dataset contains the digitized treatments in Plazi based on the original journal article Herbert, David G. (2020): Revision of the aperturally dentate Charopidae (Gastropoda: Stylommatophora) of southern Africa - genus Afrodonta s. lat., with description of five new genera, twelve new species and one new subspecies. European Journal of Taxonomy 629: 1-55, DOI: https://doi.org/10.5852/ejt.2020.629