cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18085936
title: TABLE 1 in A new Leccinum species from the Altai Mountains

description: TABLE 1. The Leccinum sequences we used for the alignments with their corresponding GenBank access numbers and reference.
SpeciesGenBank accession numbersReferencesITS28SEF-1αRPB2Leccinum albumMZ392872MW413907MW439267MW439259Meng et al. 2021Leccinum aurantiacumAF454569MK601759MK721113MK766318den Bakker et al. 2004; Kuo & Ortiz-Santana 2020Leccinum duriusculumMZ485402MZ675541MZ707785MZ707779Meng et al. 2021Leccinum holopusAF454564MK601763MW439266MW439258den Bakker et al. 2004; Kuo & Ortiz-Santana 2020; Meng et al. 2021Leccinum melaneumKX610697MZ675542MZ707786MZ707780Kalucka et al. 2016 / Meng et al 2021Leccinum monticolaAY538839MK601767KF112249MK766325den Bakker et al. 2004; Wu et al. 2014; Kuo & Ortiz-Santana 2020Leccinum new sp.ON524838ON514264OR758905OR758904in this studyLeccinum parascabrumMZ392875MW413912MW439272MW439264Meng et al. 2021Leccinum piceinumAF454578---Den Bakker et al. 2004Leccinum pseudoborneenseMZ412902---Meng et al. 2021Leccinum scabrumKC552012KT990587MZ707787KT990423Orihara et al. 2016; Wu et al. 2016; Meng et al 2021Leccinum schistophilumMH752446MZ675544MZ707788KT824022Raspé et al., 2016; Wu et al. 2016; Meng et al. 2021Leccinum snelliiKM248968MK601773MK721127MK766331Berube et al. (GenBank); Kuo & Ortiz-Santana 2020Leccinum subradicatumMT934814---Orihara et al. 2016Leccinum talamancaeAY544779MK601776MK721131MK766335den Bakker et al. 2004; Kuo & Ortiz-Santana 2020Leccinum variicolorMH220332AF139706KF112251MG212636Kudzma et al. (GenBank); Binder & Besl 2000; Wu et al. 2014; Vadthanarat et al., 2018Leccinum violaceotinctumMN250203MK601780MK721134MK766337Kuo & Ortiz-Santana 2020Leccinum versipelleAF454574MZ675545MT874823MZ707782den Bakker et al. 2004; Orihara et al. 2016; Meng et al. 2021
......continued on the next page
description: Published as part of Vlasenko, Vyacheslav A., 2023, A new Leccinum species from the Altai Mountains, pp. 193 in Phytotaxa 625 (2) on page 193, DOI: 10.11646/phytotaxa.625.2.5, http://zenodo.org/record/10150942
DOI: 10.5281/zenodo.18085937
title: TABLE 1 in A new Leccinum species from the Altai Mountains

description: TABLE 1. The Leccinum sequences we used for the alignments with their corresponding GenBank access numbers and reference.
SpeciesGenBank accession numbersReferencesITS28SEF-1αRPB2Leccinum albumMZ392872MW413907MW439267MW439259Meng et al. 2021Leccinum aurantiacumAF454569MK601759MK721113MK766318den Bakker et al. 2004; Kuo & Ortiz-Santana 2020Leccinum duriusculumMZ485402MZ675541MZ707785MZ707779Meng et al. 2021Leccinum holopusAF454564MK601763MW439266MW439258den Bakker et al. 2004; Kuo & Ortiz-Santana 2020; Meng et al. 2021Leccinum melaneumKX610697MZ675542MZ707786MZ707780Kalucka et al. 2016 / Meng et al 2021Leccinum monticolaAY538839MK601767KF112249MK766325den Bakker et al. 2004; Wu et al. 2014; Kuo & Ortiz-Santana 2020Leccinum new sp.ON524838ON514264OR758905OR758904in this studyLeccinum parascabrumMZ392875MW413912MW439272MW439264Meng et al. 2021Leccinum piceinumAF454578---Den Bakker et al. 2004Leccinum pseudoborneenseMZ412902---Meng et al. 2021Leccinum scabrumKC552012KT990587MZ707787KT990423Orihara et al. 2016; Wu et al. 2016; Meng et al 2021Leccinum schistophilumMH752446MZ675544MZ707788KT824022Raspé et al., 2016; Wu et al. 2016; Meng et al. 2021Leccinum snelliiKM248968MK601773MK721127MK766331Berube et al. (GenBank); Kuo & Ortiz-Santana 2020Leccinum subradicatumMT934814---Orihara et al. 2016Leccinum talamancaeAY544779MK601776MK721131MK766335den Bakker et al. 2004; Kuo & Ortiz-Santana 2020Leccinum variicolorMH220332AF139706KF112251MG212636Kudzma et al. (GenBank); Binder & Besl 2000; Wu et al. 2014; Vadthanarat et al., 2018Leccinum violaceotinctumMN250203MK601780MK721134MK766337Kuo & Ortiz-Santana 2020Leccinum versipelleAF454574MZ675545MT874823MZ707782den Bakker et al. 2004; Orihara et al. 2016; Meng et al. 2021
......continued on the next page
description: Published as part of Vlasenko, Vyacheslav A., 2023, A new Leccinum species from the Altai Mountains, pp. 193 in Phytotaxa 625 (2) on page 193, DOI: 10.11646/phytotaxa.625.2.5, http://zenodo.org/record/10150942
DOI: 10.15468/dl.ckqjx5
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tylototriton dabienicus"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068482-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/tkfmmx45y2.1
title: Sporoplasm Surface Protein SSP2 hijacks APP to trigger mitochondrial apoptosis in Microsporidian-infected cells

description: Microsporidia are intracellular eukaryotic pathogens that pose a substantial threat to both immunocompetent and immunocompromised hosts. They infect host cells and disrupt their normal function to promote parasite growth. However, the specific proteins that affect the host’s mitochondria are not well understood. In this study, we identified a novel microsporidian sporoplasm surface protein, SSP2, which interacts with the host’s amyloid precursor protein (APP) through the “GXXXG” motif shared by both proteins. This interaction, along with a previously identified protein SSP1, forms a new pathway involving APP and mitochondrial channels. This pathway damages the mitochondria, triggering cell death and helping the parasite release mature spores. Our results show that SSP2 promotes the breakdown of APP, leading to the production of harmful amyloid-β peptides that disrupt mitochondrial function and cause apoptosis. These findings provide new insights into the mechanisms of microsporidian infection and suggest potential therapeutic approaches targeting mitochondrial pathways to treat these infections.
DOI: 10.15468/dl.mp58pv
title: Occurrence Download

description: A dataset containing 8741 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Madagascar",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (061b4f20-f241-11da-a328-b8a03c50a862, 90fd6680-349f-11d8-aa2d-b8a03c50a862, 2cd829bb-b713-433d-99cf-64bef11e5b3e)",
 "TaxonKey is Clusiaceae"
 ]
}

 The dataset includes 8741 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068483-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2gr5m1
title: CCDC 2286393: Experimental Crystal Structure Determination

description: Related Article: Cheng He|2024|CSD Communication|||
description: Related Article: Hechuan Li, Jianhua Yang, Danyang Li, Xuezhao Li, Jianxu Li, Cheng He|2024|Angew.Chem.,Int.Ed.|63|e202409094|doi:10.1002/anie.202409094
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pxm5f
title: CCDC 2500155: Experimental Crystal Structure Determination

description: Related Article: Yusei Hisata, Riku Ikeda, Anil Chauhan, Yoichi Hoshimoto|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c04669
description: Related Article: Yoichi Hoshimoto|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pxm6g
title: CCDC 2500156: Experimental Crystal Structure Determination

description: Related Article: Yusei Hisata, Riku Ikeda, Anil Chauhan, Yoichi Hoshimoto|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c04669
description: Related Article: Yoichi Hoshimoto|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pxm7h
title: CCDC 2500157: Experimental Crystal Structure Determination

description: Related Article: Yusei Hisata, Riku Ikeda, Anil Chauhan, Yoichi Hoshimoto|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c04669
description: Related Article: Yoichi Hoshimoto|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pxm8j
title: CCDC 2500158: Experimental Crystal Structure Determination

description: Related Article: Yusei Hisata, Riku Ikeda, Anil Chauhan, Yoichi Hoshimoto|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c04669
description: Related Article: Yoichi Hoshimoto|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.t292yp
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tylototriton hainanensis"
 ]
}

 The dataset includes 30 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068484-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30963946
title: Supplementary Material for: Family Integrated Care in Single Family Rooms and Neonatal Outcomes in Preterm Infants: A Multicenter Cohort Study

description: Introduction: We aimed to evaluate the effect of Family Integrated Care (FICare) in single family rooms (SFR) on infant outcomes, compared with standard neonatal care (SNC) in open bay units (OBU).

Methods: A prospective cohort study was conducted in three Dutch level II neonatal units. Preterm infants hospitalized 7 days were included between 2017 and 2020. The intervention site provided FICare in SFR; control sites provided SNC in OBU. Predefined secondary outcomes included length of stay (LOS), breastfeeding, growth, late-onset sepsis, days with tube feeding, respiratory support and intravenous access, discharge with tube feeding, and readmissions. Linear mixed models accounting for multiple births, and exploratory mediation analyses, were used.

Results: A total of 358 infants were included (169 FICare; 189 SNC; median gestational age 33+3 weeks [IQR 30+5-35+0]). FICare was associated with a 9% reduction in LOS (adjusted mean ratio 0.91 ≈ 2 days, 95%-CI 0.84-0.99). Infants in the FICare group were more likely to be discharged with tube feeding (adjusted odds ratio 5.77, 95%-CI 2.25-14.79) and had fewer days with tube feeding in hospital (adjusted mean ratio 0.79, 95%-CI 0.66-0.94) and intravenous access (adjusted incidence rate ratio 0.55, 95%-CI 0.39-0.76), while maintaining similar growth and readmission rates. Days with tube feeding and intravenous access fully mediated the effect on LOS (adjusted total indirect effect 0.91, 95%-CI 0.85-0.97). Other outcomes did not differ.

Conclusions: FICare in SFR was associated with decreased LOS, mediated by acquiring feeding skills. Further research should include robust study designs, including diverse parental populations.

Trial Registration: National Trial Register (identifier: NL6175).
DOI: 10.6084/m9.figshare.30963946.v1
title: Supplementary Material for: Family Integrated Care in Single Family Rooms and Neonatal Outcomes in Preterm Infants: A Multicenter Cohort Study

description: Introduction: We aimed to evaluate the effect of Family Integrated Care (FICare) in single family rooms (SFR) on infant outcomes, compared with standard neonatal care (SNC) in open bay units (OBU).

Methods: A prospective cohort study was conducted in three Dutch level II neonatal units. Preterm infants hospitalized 7 days were included between 2017 and 2020. The intervention site provided FICare in SFR; control sites provided SNC in OBU. Predefined secondary outcomes included length of stay (LOS), breastfeeding, growth, late-onset sepsis, days with tube feeding, respiratory support and intravenous access, discharge with tube feeding, and readmissions. Linear mixed models accounting for multiple births, and exploratory mediation analyses, were used.

Results: A total of 358 infants were included (169 FICare; 189 SNC; median gestational age 33+3 weeks [IQR 30+5-35+0]). FICare was associated with a 9% reduction in LOS (adjusted mean ratio 0.91 ≈ 2 days, 95%-CI 0.84-0.99). Infants in the FICare group were more likely to be discharged with tube feeding (adjusted odds ratio 5.77, 95%-CI 2.25-14.79) and had fewer days with tube feeding in hospital (adjusted mean ratio 0.79, 95%-CI 0.66-0.94) and intravenous access (adjusted incidence rate ratio 0.55, 95%-CI 0.39-0.76), while maintaining similar growth and readmission rates. Days with tube feeding and intravenous access fully mediated the effect on LOS (adjusted total indirect effect 0.91, 95%-CI 0.85-0.97). Other outcomes did not differ.

Conclusions: FICare in SFR was associated with decreased LOS, mediated by acquiring feeding skills. Further research should include robust study designs, including diverse parental populations.

Trial Registration: National Trial Register (identifier: NL6175).
DOI: 10.6084/m9.figshare.30963949
title: Supplementary Material for: Peri-procedural Oral Hydration Patterns and Early Renal Function after Coronary Angiography and Intervention: A Prospective Real-world Cohort Study

description: Introduction: Guidelines recommend oral hydration to prevent contrast-associated acute kidney injury (CA-AKI) after coronary angiography or intervention, but quantitative protocols are lacking, and practice varies. Shorter hospital stays limit opportunities for post-procedure creatinine monitoring, and real-world oral hydration patterns and their early renal effects remain poorly described. This study aimed to characterize peri-procedural weight-adjusted oral hydration (OH) trajectories and to assess whether trajectory membership was associated with a change in serum creatinine within 24 hours.

Methods: This single-center prospective cohort study enrolled 192 inpatients undergoing coronary angiography or intervention between September 2024 and June 2025. We recorded weight-adjusted oral intake in four windows: pre-12 hours, post-0–6 hours, 6–12 hours, and 12–24 hours. We computed partial-overlap dynamic time warping distances and clustered trajectories using partitioning around medoids. Group comparisons used nonparametric tests. The primary outcome was percent change in serum creatinine, and dose-response was assessed with generalized additive models (GAMs) adjusted for baseline creatinine, estimated glomerular filtration rate, comorbidities, procedural indication, contrast volume, and intravenous hydration.

Results: After excluding 18 patients for missing peri-procedural oral intake or post-procedure creatinine, 174 patients were analyzed (mean age 63.3 ± 11.4 years; 71.8% male). Median weight-adjusted cumulative oral intake was 10.9, 18.6, 23.9, and 33.3 mL/kg for the pre-12 h, post-0–6 h, 0–12 h, and 0–24 h windows. Time-series clustering produced two stable groups (Low-OH n = 85, High-OH n = 89; average silhouette = 0.393; bootstrap ARI = 0.845). The largest between-group difference occurred in the 0–6 h window (median 4.12 vs 2.00 mL/kg/h, p &lt; 0.001). No patient met CA-AKI criteria. In adjusted GAMs, the 0–6 h oral-hydration rate was not a significant smooth term (edf = 0.16, p = 0.21), and cluster membership was not associated with creatinine change. However, the High-OH cluster had substantially greater 6-hour urine output and larger positive fluid balance (p &lt; 0.001) while serum potassium was similar between clusters.

Conclusion: Peri-procedural oral hydration was generally ample and formed two reproducible patterns. Concentrating oral intake in the first 6 hours increased early urine output and positive fluid balance but did not show a significant dose-response association with early serum creatinine change. This null result should be interpreted cautiously because the cohort was generally low-risk, follow-up was short, and the study had limited power. Future studies should validate whether early concentrated oral hydration protects renal function using earlier sensitive biomarkers and by targeting high-risk patients.
DOI: 10.6084/m9.figshare.30963949.v1
title: Supplementary Material for: Peri-procedural Oral Hydration Patterns and Early Renal Function after Coronary Angiography and Intervention: A Prospective Real-world Cohort Study

description: Introduction: Guidelines recommend oral hydration to prevent contrast-associated acute kidney injury (CA-AKI) after coronary angiography or intervention, but quantitative protocols are lacking, and practice varies. Shorter hospital stays limit opportunities for post-procedure creatinine monitoring, and real-world oral hydration patterns and their early renal effects remain poorly described. This study aimed to characterize peri-procedural weight-adjusted oral hydration (OH) trajectories and to assess whether trajectory membership was associated with a change in serum creatinine within 24 hours.

Methods: This single-center prospective cohort study enrolled 192 inpatients undergoing coronary angiography or intervention between September 2024 and June 2025. We recorded weight-adjusted oral intake in four windows: pre-12 hours, post-0–6 hours, 6–12 hours, and 12–24 hours. We computed partial-overlap dynamic time warping distances and clustered trajectories using partitioning around medoids. Group comparisons used nonparametric tests. The primary outcome was percent change in serum creatinine, and dose-response was assessed with generalized additive models (GAMs) adjusted for baseline creatinine, estimated glomerular filtration rate, comorbidities, procedural indication, contrast volume, and intravenous hydration.

Results: After excluding 18 patients for missing peri-procedural oral intake or post-procedure creatinine, 174 patients were analyzed (mean age 63.3 ± 11.4 years; 71.8% male). Median weight-adjusted cumulative oral intake was 10.9, 18.6, 23.9, and 33.3 mL/kg for the pre-12 h, post-0–6 h, 0–12 h, and 0–24 h windows. Time-series clustering produced two stable groups (Low-OH n = 85, High-OH n = 89; average silhouette = 0.393; bootstrap ARI = 0.845). The largest between-group difference occurred in the 0–6 h window (median 4.12 vs 2.00 mL/kg/h, p &lt; 0.001). No patient met CA-AKI criteria. In adjusted GAMs, the 0–6 h oral-hydration rate was not a significant smooth term (edf = 0.16, p = 0.21), and cluster membership was not associated with creatinine change. However, the High-OH cluster had substantially greater 6-hour urine output and larger positive fluid balance (p &lt; 0.001) while serum potassium was similar between clusters.

Conclusion: Peri-procedural oral hydration was generally ample and formed two reproducible patterns. Concentrating oral intake in the first 6 hours increased early urine output and positive fluid balance but did not show a significant dose-response association with early serum creatinine change. This null result should be interpreted cautiously because the cohort was generally low-risk, follow-up was short, and the study had limited power. Future studies should validate whether early concentrated oral hydration protects renal function using earlier sensitive biomarkers and by targeting high-risk patients.
DOI: 10.15468/dl.9j6fed
title: Occurrence Download

description: A dataset containing 137 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tylototriton himalayanus"
 ]
}

 The dataset includes 137 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068486-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/33bnkfwsjd
title: Valorization of Industrial Agro-Waste: A Quantitative Phytochemical and Nutritional Analysis of Tomato and Sweet Corn Residues: A Case Study of Anand City, Gujarat, India

description: The global food processing industry generates billions of tons of organic waste annually. In India, a nation with a burgeoning food processing sector, the disposal of these materials poses significant environmental challenges. However, modern scientific perspectives have shifted from viewing these materials as "waste" to viewing them as "untapped resources”. This study focuses on the industrial residues of tomato (Solanum lycopersicum) and sweet corn (Zea mays var. saccharata), specifically the cobs and husks, sourced from the industrial hub of Anand City, Gujarat, India. The concept of the circular economy is central to this research. By quantifying the bioactive compounds within these residues, we move toward a "zero-waste" manufacturing model where by-products from one industry become the high-value raw materials for another viz. the pharmaceutical and nutraceutical sectors. The samples were sourced from food processing units in Anand, often referred to as the "Milk Capital of India" but also a significant hub for vegetable processing. To ensure the stability of the bioactive compounds, rigorous pre-treatment protocols were followed: Rinsing, Drying, Pulverization, Storage. The accuracy of this dataset is supported by a sophisticated instrumentation suite: Microplate Reader (iMARK, BIORAD), Double-Beam Spectrophotometer (JASCO V-630), Flame Photometer, Gas Chromatography (GC). To ensure the waste materials meet safety and quality benchmarks, the nutritional analysis was performed in strict compliance with the Food Safety and Standards Authority of India (FSSAI) manual. This includes the measurement of: Crude protein and fiber content, Ash content (mineral density), Moisture and lipid profiles. To bridge the gap between raw data and actionable insights, the study employed: Regression Analysis, Correlation Coefficients. The quantification reveals that tomato and corn wastes are not merely fibrous fillers but are dense in both micro- and macronutrients. The high alkaloid and phenolic content suggests these wastes could be processed into standardized extracts for herbal medicines. Flavonoids extracted from corn husks or tomato pomace can be used as natural preservatives or health-boosting additives in the human food chain. The presence of balanced carbohydrates and minerals makes these residues an ideal, cost-effective base for livestock feed, reducing the reliance on primary crops for animal nutrition. This study concludes that industrial food waste from Anand, Gujarat, represents a significant economic opportunity. By integrating these "wastes" back into the industrial cycle, we reduce environmental footprints, lower production costs for pharmaceuticals, and enhance food security through better resource management.