cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.mm5ng8
title: Occurrence Download

description: A dataset containing 2543 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is New Zealand",
 "OccurrenceStatus is Present",
 "TaxonKey is Rattus rattus (Linnaeus, 1758)"
 ]
}

 The dataset includes 2543 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018701-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27499950.v1
title: Experimental designs and reference genomes for: <b>Genome-Centric Meta-RNA-Seq Analysis of Polyethylene and Polystyrene Fed </b><b><i>Galleria mellonella</i></b>

description: Using two FASTA files as reference genomes, we conducted separate meta-RNA-Seq quantifications. One utilized GM03PP as the reference genome, with a corresponding experimental design, and the other employed I. sakaiensis as the reference with its respective experimental design. The source BioProjects for the input FASTQ files were PRJNA759905, PRJNA699031, and PRJNA687344 which were obtained through NCBI.
DOI: 10.15468/dl.h8cv5n
title: Occurrence Download

description: A dataset containing 1015713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((74.05586 40.42088,73.37089 39.34119,73.89332 38.33115,74.43993 38.26975,74.70221 37.66291,74.3165 37.16406,74.77935 36.77836,75.22676 36.73722,76.34268 35.54653,77.62438 35.23935,78.38704 33.83054,78.91667 32.80307,77.63497 32.6124,78.44001 31.89211,78.74719 31.08708,81.43993 29.76821,81.70225 30.21513,82.22689 29.91394,85.67593 27.74736,87.90593 27.51794,89.12909 26.65722,90.09554 27.68896,92.79896 27.57142,94.28781 28.69459,95.77665 28.66847,96.22069 28.133,97.60045 27.95712,97.85249 28.0667,98.23603 27.35441,98.49904 26.71882,98.35658 26.05036,98.12645 25.79832,97.97303 25.57915,98.52095 25.21753,99.20037 25.42574,99.71541 26.1709,101.06329 26.08324,102.37829 26.6969,103.80288 27.32153,104.77818 28.65845,104.93159 30.54329,108.81132 39.46236,93.37481 43.77172,75.23309 41.5027,74.05586 40.42088))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 1015713 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018696-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8d6sz8
title: Occurrence Download

description: A dataset containing 434 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "TaxonKey is Callinectes sapidus Rathbun, 1896"
 ]
}

 The dataset includes 434 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018702-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69cdv4
title: Occurrence Download

description: A dataset containing 1496 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Archidendron clypearia (Jack) I.C.Nielsen"
 ]
}

 The dataset includes 1496 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018703-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14010495
title: Effects of alternate wetting and drying irrigation on methane and nitrous oxide emissions from rice fields
DOI: 10.5281/zenodo.14010496
title: Effects of alternate wetting and drying irrigation on methane and nitrous oxide emissions from rice fields
DOI: 10.15468/dl.4bs9y2
title: Occurrence Download

description: A dataset containing 39261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is United States of America",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 39261 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018704-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7hfvgs
title: Occurrence Download

description: A dataset containing 1754 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Bolivia (Plurinational State of), Ecuador, Nicaragua, Brazil, Costa Rica, Mexico, Panama, Colombia, Cuba, Jamaica)",
 "OccurrenceStatus is Present",
 "TaxonKey is Ananthacorus angustifolius (Sw.) Underw. & Maxon"
 ]
}

 The dataset includes 1754 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018705-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mrvef3
title: Occurrence Download

description: A dataset containing 6162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Madagascar",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (DD, NE)",
 "OccurrenceStatus is Present",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 6162 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018706-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e210102
title: Supplementary data for: Nonconvexities, Retirement, and the Elasticity of Labor Supply

description: We consider two life cycle models of labor supply that use nonconvexities to generate retirement. In each case we derive a link between hours worked prior to retirement, the intertemporal elasticity of substitution for labor (IES), and the size of the nonconvexities. This link is robust to allowing for credit constraints and human capital accumulation by younger workers and suggests values for the IES that are .75 or higher.
DOI: 10.3886/e210102v1-157963
title: Supplementary data for: Nonconvexities, Retirement, and the Elasticity of Labor Supply

description: We consider two life cycle models of labor supply that use nonconvexities to generate retirement. In each case we derive a link between hours worked prior to retirement, the intertemporal elasticity of substitution for labor (IES), and the size of the nonconvexities. This link is robust to allowing for credit constraints and human capital accumulation by younger workers and suggests values for the IES that are .75 or higher.
DOI: 10.15468/dl.46sem6
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((9.26035 45.92023,9.49790 45.92023,9.49790 46.01524,9.26035 46.01524,9.26035 45.92023))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Primula glaucescens Moretti"
 ]
}

 The dataset includes 23 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018708-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/zydy-1534
title: Data from "Powerful nuclear outflows and circumgalactic medium shocks driven by the most luminous quasar in the Universe."

description: NIRSpec IFU observations of the environment surrounding obscured quasar W2246-0526, targeting rest-frame optical emission lines redshifted into the near-infrared.
DOI: 10.15468/dl.9fjeks
title: Occurrence Download

description: A dataset containing 16944 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is Spain",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 16944 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018707-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13691648
title: Benchmarking Machine Learning Methods for Synthetic Lethality Prediction in Cancer

description: Benchmarking of Machine Learning Methods for Predicting Synthetic Lethality Interactions

Data Preparation and Download Instructions

After downloading data from this project, follow these steps to prepare the training data:

Step 1: Download all the data parts from the [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.13691648.svg)](https://doi.org/10.5281/zenodo.13691648) provided in the repository.

Matters needing attention:



The actual command will depend on how you're downloading files from Google Drive. For the convenience of downloading, the files have been compressed and split.

We have prepared two versions of data, namely the complete version (`data_large.tar.gz`) and the version without PiLSL database (`data_small.tar.gz`).

The decompressed size of the complete version is about 90GB, while the decompressed size of the version without PiLSL database is about 22GB.

(Due to the extremely time-consuming database construction process, it is recommended to download the complete version of the data. However, the data version without PiLSL database can successfully run all 10 models except PiLSL.)


Step 2: Combine the parts into a single archive.

cat data_large.tar.gz.part* > data_large.tar.gz     # Complete version, the size after extracted is about 100GB.
# cat data_small.tar.gz.part* > data_small.tar.gz   # The version without PiLSL database, the size after extracted is about 25GB.

Step 3: Verify the integrity of the downloaded files.

md5sum -c data_large.tar.gz.md5
# md5sum -c data_small.tar.gz.md5 # The version without PiLSL database

 

Step 4: Extract the dataset.

tar -xzvf data_large.tar.gz
# tar -xzvf data_small.tar.gz # The version without PiLSL database
DOI: 10.15468/dl.a8p4p6
title: Occurrence Download

description: A dataset containing 704 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Costa Rica, Ecuador, Bolivia (Plurinational State of), Colombia, Peru, Jamaica, Venezuela (Bolivarian Republic of), Mexico, Panama, Australia)",
 "OccurrenceStatus is Present",
 "TaxonKey is Ascogrammitis anfractuosa (Kunze ex Klotzsch) Sundue"
 ]
}

 The dataset includes 704 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018710-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvwbf9
title: Occurrence Download

description: A dataset containing 1863 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is France",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 1863 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018711-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.begd55
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is Mayotte",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 27 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018714-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dtuphv
title: Occurrence Download

description: A dataset containing 162806 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Namibia",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 162806 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018712-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9785848
title: US Stocks Fundamental Data ( Jan 24 - June 24)
DOI: 10.5281/zenodo.14025191
title: Benchmarking Machine Learning Methods for Synthetic Lethality Prediction in Cancer

description: Benchmarking of Machine Learning Methods for Predicting Synthetic Lethality Interactions

Update Notice

In the latest version of the dataset, a new file named `predicted_by_model.csv` has been added. This file contains a list of top-ranked gene pairs based on model predictions. It may provide valuable insights for identifying novel synthetic lethality interactions.

Data Preparation and Download Instructions

After downloading data from this project, follow these steps to prepare the training data:

Step 1: Download all the data parts from this repository.

Matters needing attention:



The actual command will depend on how you're downloading files from Google Drive. For the convenience of downloading, the files have been compressed and split.

We have prepared two versions of data, namely the complete version (`data_large.tar.gz`) and the version without PiLSL database (`data_small.tar.gz`).

The decompressed size of the complete version is about 90GB, while the decompressed size of the version without PiLSL database is about 22GB.

(Due to the extremely time-consuming database construction process, it is recommended to download the complete version of the data. However, the data version without PiLSL database can successfully run all 10 models except PiLSL.)


Step 2: Combine the parts into a single archive.

cat data_large.tar.gz.part* > data_large.tar.gz     # Complete version, the size after extracted is about 100GB.
# cat data_small.tar.gz.part* > data_small.tar.gz   # The version without PiLSL database, the size after extracted is about 25GB.

Step 3: Verify the integrity of the downloaded files.

md5sum -c data_large.tar.gz.md5
# md5sum -c data_small.tar.gz.md5 # The version without PiLSL database

 

Step 4: Extract the dataset.

tar -xzvf data_large.tar.gz
# tar -xzvf data_small.tar.gz # The version without PiLSL database
DOI: 10.5281/zenodo.13691647
title: Benchmarking Machine Learning Methods for Synthetic Lethality Prediction in Cancer

description: Benchmarking of Machine Learning Methods for Predicting Synthetic Lethality Interactions

Update Notice

In the latest version of the dataset, a new file named `predicted_by_model.csv` has been added. This file contains a list of top-ranked gene pairs based on model predictions. It may provide valuable insights for identifying novel synthetic lethality interactions.

Data Preparation and Download Instructions

After downloading data from this project, follow these steps to prepare the training data:

Step 1: Download all the data parts from this repository.

Matters needing attention:



The actual command will depend on how you're downloading files from Google Drive. For the convenience of downloading, the files have been compressed and split.

We have prepared two versions of data, namely the complete version (`data_large.tar.gz`) and the version without PiLSL database (`data_small.tar.gz`).

The decompressed size of the complete version is about 90GB, while the decompressed size of the version without PiLSL database is about 22GB.

(Due to the extremely time-consuming database construction process, it is recommended to download the complete version of the data. However, the data version without PiLSL database can successfully run all 10 models except PiLSL.)


Step 2: Combine the parts into a single archive.

cat data_large.tar.gz.part* > data_large.tar.gz     # Complete version, the size after extracted is about 100GB.
# cat data_small.tar.gz.part* > data_small.tar.gz   # The version without PiLSL database, the size after extracted is about 25GB.

Step 3: Verify the integrity of the downloaded files.

md5sum -c data_large.tar.gz.md5
# md5sum -c data_small.tar.gz.md5 # The version without PiLSL database

 

Step 4: Extract the dataset.

tar -xzvf data_large.tar.gz
# tar -xzvf data_small.tar.gz # The version without PiLSL database
DOI: 10.15468/dl.es25kf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is Guadeloupe",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018717-241024112534372/datasets/export for details.
DOI: 10.15468/dl.7wrehv
title: Occurrence Download

description: A dataset containing 471 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ginkgo biloba L."
 ]
}

 The dataset includes 471 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018718-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nhejte
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is French Guiana",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018719-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5xrd2t
title: Occurrence Download

description: A dataset containing 3403810 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is A global database for the distributions of crop wild relatives"
 ]
}

 The dataset includes 3403810 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018709-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9786027
title: Single vs. Dual Parent Household Outcomes
DOI: 10.15468/dl.a456nj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is Martinique",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018720-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qxg9jz
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is North Macedonia",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 58 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018722-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b4h9ph
title: Occurrence Download

description: A dataset containing 131502 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mid-winter count of water birds and other bird species in Bulgaria"
 ]
}

 The dataset includes 131502 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018713-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m3zq25
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is North Macedonia",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 58 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018723-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ywchnk
title: Occurrence Download

description: A dataset containing 1572 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes albopictus (Skuse, 1894)",
 "Country is Colombia",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 1572 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018725-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ksttqx
title: Occurrence Download

description: A dataset containing 956346 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Watervogels - Wintering waterbirds in Flanders, Belgium"
 ]
}

 The dataset includes 956346 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018716-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.