cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.35cbtk
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudostaurosira subsalina, Rhopalodia musculus, Discostella woltereckii, Adlafia minuscula, Achnanthes thienemannii, Nitzschia forfica, Aulacoseira ambigua, Brachysira neoexilis, Fragilaria lanceolata, Achnanthidium latecephalum, Denticula elegans)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "Issue" : [
 "is one of (Recorded date invalid, Recorded date mismatch, Recorded date unlikely, Modified date invalid)"
 ]
 }
 },
 "Geometry MULTIPOLYGON (((27.1586 -33.5889, 28.2048 -32.9007, 28.5753 -32.6569, 29.4902 -31.7517, 29.7284 -31.5933, 29.7284 -28.9003, 29.7284 -24.1503, 25.0903 -24.1503, 24.9784 -24.369, 24.9333 -24.4571, 23.8962 -24.2467, 22.8065 -24.295, 22.3719 -24.7207, 22.2323 -25.547, 22.0387 -25.7188, 21.7833 -25.7784, 21.5388 -25.7113, 21.3553 -25.5415, 20.7576 -24.3688, 20.5896 -24.1503, 20.529 -24.0715, 20.509 -24.0455, 20.2284 -23.6805, 20.0952 -23.5072, 19.9968 -23.017, 19.7843 -22.5405, 19.1988 -21.8785, 18.5972 -21.5447, 17.8859 -21.3993, 17.1626 -21.4805, 16.5332 -21.7596, 16.1257 -22.0882, 15.8234 -22.4662, 15.606 -22.8993, 15.4784 -23.4046, 15.4933 -24.0715, 15.4945 -24.1257, 15.5034 -24.1503, 16.0509 -25.6631, 15.6372 -28.0032, 16.2782 -28.5786, 16.4358 -28.7202, 16.5654 -28.9003, 16.726 -29.1235, 17.1957 -30.3752, 17.6655 -31.1743, 18.1322 -31.7679, 18.2495 -32.2638, 18.2339 -32.5266, 18.1411 -32.657, 18.1007 -32.7021, 18.0224 -32.6366, 17.8923 -32.6419, 17.754 -32.8255, 17.7723 -32.9007, 17.8156 -33.0786, 18.0371 -33.4611, 18.1771 -33.6503, 18.2971 -33.8124, 18.2181 -34.0492, 18.3197 -34.3408, 18.4452 -34.429, 18.5435 -34.4213, 18.5872 -34.3667, 18.5363 -34.167, 18.7345 -34.1508, 18.7216 -34.3637, 18.7808 -34.4521, 19.0289 -34.4206, 19.0831 -34.4835, 19.2655 -34.5017, 19.2032 -34.6157, 19.2394 -34.6926, 19.375 -34.6963, 19.6091 -34.8524, 19.8251 -34.8396, 19.9798 -34.9064, 20.1081 -34.8731, 20.1517 -34.7847, 20.2284 -34.7667, 20.2855 -34.7533, 20.509 -34.5676, 20.524 -34.555, 20.8859 -34.5419, 20.9606 -34.4398, 21.2995 -34.5131, 21.5296 -34.4338, 21.8696 -34.4439, 22.0323 -34.2835, 22.221 -34.2428, 22.2566 -34.1304, 22.5993 -34.0741, 22.9652 -34.1674, 23.4069 -34.1858, 23.4955 -34.0792, 23.6056 -34.0563, 24.8471 -34.2877, 24.9447 -34.2397, 24.9784 -34.1564, 24.9784 -33.6503, 26.9976 -33.6503, 27.1586 -33.5889)))"
 ]
}

 The dataset includes 51 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011013-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nfn372
title: Occurrence Download

description: A dataset containing 570361 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is South Australian Museum Adelaide provider for OZCAM"
 ]
}

 The dataset includes 570361 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011008-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nre72e
title: Occurrence Download

description: A dataset containing 20222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Loxodonta africana"
 ]
}

 The dataset includes 20222 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011015-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jkcgcx
title: Occurrence Download

description: A dataset containing 2251 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cyanolyca nanus"
 ]
}

 The dataset includes 2251 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011016-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.advt2k
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Barkeria chinensis"
 ]
}

 The dataset includes 32 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011017-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hup39q
title: Occurrence Download

description: A dataset containing 1286 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "GadmGid is ESP.12_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Corylus avellana"
 ]
}

 The dataset includes 1286 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011018-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.468twh
title: Occurrence Download

description: A dataset containing 309 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Romerolagus diazi"
 ]
}

 The dataset includes 309 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011019-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cscff7
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Bletia concolor"
 ]
}

 The dataset includes 24 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011020-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.238grn
title: Occurrence Download

description: A dataset containing 1887109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Africa, Asia, Europe)",
 "TaxonKey is Ciconia ciconia"
 ]
}

 The dataset includes 1887109 records from 1951 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010995-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kugmdj
title: Occurrence Download

description: A dataset containing 11552149 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is China"
 ]
}

 The dataset includes 11552149 records from 4976 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006981-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7f6dgd
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cobitis taurica)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049506-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/6075
title: PMIndia-SpeechDataset-2004-2024
DOI: 10.15468/dl.knuxxf
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Onobrychis viciifolia",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 50 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049508-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zfen8u
title: Occurrence Download

description: A dataset containing 1412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Onobrychis viciifolia",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1412 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049510-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kfzwfa
title: Occurrence Download

description: A dataset containing 572 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Onobrychis viciifolia",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 572 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049507-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29648846
title: Supplementary Material for: Identification and Validation of Aging-related Genes in the Comorbidity of Coronary Heart Disease and Colorectal Cancer

description: Introduction: 
Coronary heart disease (CHD) and colorectal cancer (CRC) are common comorbidities among the elderly population. However, there is a lack of clinical prediction tools that utilize aging-related genes to forecast the onset and outcomes of these conditions in elderly patients.
Methods: 
Gene expression data related to CHD and CRC were examined using The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) of the National Center for Biotechnology Information (NCBI). The differentially expressed genes (DEGs) associated with aging, CHD, and CRC were identified. Predictive models for CHD diagnosis and prognostic risk prediction for CRC were constructed using the LASSO, Random Forest, and SVM-RFE techniques. Nomogram models have been developed to assess the prognosis of patients with CRC. Drug repositioning was performed to evaluate the shared predictive genes for diagnosing CHD and predicting CRC outcomes.
Results:
MYL9 and ULBP2 were identified as DEGs associated with aging, CHD, and CRC. Predictive models for CHD diagnosis and CRC risk prediction have been constructed. We developed a nomogram model to assess CRC prognosis and to identify MYL9 and ULBP2 as predictive genes. We assessed the potential of MYL9 and ULBP2 as therapeutic targets in elderly patients with CHD and CRC using a drug repositioning analysis. 
Conclusion: 
We identified MYL9 and ULBP2 as aging-related markers for the diagnosis of CHD and the prognosis of CRC. In addition, we developed clinical tool models to facilitate the diagnosis of CHD and predict the prognosis of CRC, specifically in the elderly population.
DOI: 10.6084/m9.figshare.29648846.v1
title: Supplementary Material for: Identification and Validation of Aging-related Genes in the Comorbidity of Coronary Heart Disease and Colorectal Cancer

description: Introduction: 
Coronary heart disease (CHD) and colorectal cancer (CRC) are common comorbidities among the elderly population. However, there is a lack of clinical prediction tools that utilize aging-related genes to forecast the onset and outcomes of these conditions in elderly patients.
Methods: 
Gene expression data related to CHD and CRC were examined using The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) of the National Center for Biotechnology Information (NCBI). The differentially expressed genes (DEGs) associated with aging, CHD, and CRC were identified. Predictive models for CHD diagnosis and prognostic risk prediction for CRC were constructed using the LASSO, Random Forest, and SVM-RFE techniques. Nomogram models have been developed to assess the prognosis of patients with CRC. Drug repositioning was performed to evaluate the shared predictive genes for diagnosing CHD and predicting CRC outcomes.
Results:
MYL9 and ULBP2 were identified as DEGs associated with aging, CHD, and CRC. Predictive models for CHD diagnosis and CRC risk prediction have been constructed. We developed a nomogram model to assess CRC prognosis and to identify MYL9 and ULBP2 as predictive genes. We assessed the potential of MYL9 and ULBP2 as therapeutic targets in elderly patients with CHD and CRC using a drug repositioning analysis. 
Conclusion: 
We identified MYL9 and ULBP2 as aging-related markers for the diagnosis of CHD and the prognosis of CRC. In addition, we developed clinical tool models to facilitate the diagnosis of CHD and predict the prognosis of CRC, specifically in the elderly population.
DOI: 10.6084/m9.figshare.29648849
title: Supplementary Material for: Systematic Review and Meta-Analysis of the Diagnostic Accuracy of the World Health Organization International System for Reporting Pancreatic Cytopathology

description: Introduction
The World Health Organization (WHO), in collaboration with the International Academy of Cytology and the International Agency for Research on Cancer, has introduced a standardized reporting system for pancreatic cytopathology. This system refines diagnostic categories, integrates malignancy risk estimates, and aligns with the WHO Classification of Tumours. It builds on the Papanicolaou Society of Cytopathology framework, improving risk stratification through categories such as pancreatic neoplasm-low risk/grade (PaN-Low) and pancreatic neoplasm-high risk/grade (PaN-High). This study evaluates the diagnostic accuracy of fine-needle aspiration biopsy (FNAB) for pancreatic lesions using the WHO system.
Methods
A systematic literature search was performed in the PubMed and EMBASE databases, using predefined keywords- “pancreas”, “FNAB”, and “diagnostic accuracy”. Meta-analysis was conducted to determine sensitivity and specificity at different diagnostic thresholds: “PaN-High considered positive,” “Suspicious for Malignancy considered positive,” and “Malignant considered positive,” excluding inadequate samples from each study. To assess diagnostic accuracy, summary receiver operating characteristic curves were generated, and the diagnostic odds ratio (DOR) was pooled.
Results
Five studies met the inclusion criteria. The risk of malignancy ranged from 3% (Negative) to 99% (Malignant). Sensitivity and specificity varied across cut-offs: Malignant (83%, 100%), Suspicious and above (92%, 98%), and PaN-High and above (93%, 96%). DOR values confirmed high diagnostic accuracy.
Conclusion
The system effectively stratifies lesions based on malignant potential, with the “Suspicious” and “Malignant” categories demonstrating high predictive value. Expanding the diagnostic threshold to include “PaN-High” further improves sensitivity without significantly compromising specificity, making it a valuable classification for clinical practice.
DOI: 10.6084/m9.figshare.29648849.v1
title: Supplementary Material for: Systematic Review and Meta-Analysis of the Diagnostic Accuracy of the World Health Organization International System for Reporting Pancreatic Cytopathology

description: Introduction
The World Health Organization (WHO), in collaboration with the International Academy of Cytology and the International Agency for Research on Cancer, has introduced a standardized reporting system for pancreatic cytopathology. This system refines diagnostic categories, integrates malignancy risk estimates, and aligns with the WHO Classification of Tumours. It builds on the Papanicolaou Society of Cytopathology framework, improving risk stratification through categories such as pancreatic neoplasm-low risk/grade (PaN-Low) and pancreatic neoplasm-high risk/grade (PaN-High). This study evaluates the diagnostic accuracy of fine-needle aspiration biopsy (FNAB) for pancreatic lesions using the WHO system.
Methods
A systematic literature search was performed in the PubMed and EMBASE databases, using predefined keywords- “pancreas”, “FNAB”, and “diagnostic accuracy”. Meta-analysis was conducted to determine sensitivity and specificity at different diagnostic thresholds: “PaN-High considered positive,” “Suspicious for Malignancy considered positive,” and “Malignant considered positive,” excluding inadequate samples from each study. To assess diagnostic accuracy, summary receiver operating characteristic curves were generated, and the diagnostic odds ratio (DOR) was pooled.
Results
Five studies met the inclusion criteria. The risk of malignancy ranged from 3% (Negative) to 99% (Malignant). Sensitivity and specificity varied across cut-offs: Malignant (83%, 100%), Suspicious and above (92%, 98%), and PaN-High and above (93%, 96%). DOR values confirmed high diagnostic accuracy.
Conclusion
The system effectively stratifies lesions based on malignant potential, with the “Suspicious” and “Malignant” categories demonstrating high predictive value. Expanding the diagnostic threshold to include “PaN-High” further improves sensitivity without significantly compromising specificity, making it a valuable classification for clinical practice.
DOI: 10.6084/m9.figshare.29648852
title: Supplementary Material for: Delayed Extrusion of Hydroxyapatite Cement Orbital Floor Implant: A Rare Case Report of Augmentation Failure

description: Hydroxyapatite implants are widely used in orbital reconstruction due to their biocompatibility and capacity for osseointegration. Complications such as implant exposure or extrusion typically occur in the early postoperative period, with late-onset cases being exceedingly rare. This report presents a 78-year-old female who developed hydroxyapatite implant extrusion seven years after orbital volume augmentation for an anophthalmic socket. She presented with lower eyelid retraction, ectropion, redness, and a fistula in the inferior fornix. Surgical management included implant removal, placement of a dermis fat graft from the abdomen to restore orbital volume, and correction of eyelid deformities using a tarsal strip and full-thickness skin graft. Postoperatively, the patient achieved successful resolution of symptoms, restoration of orbital volume, and correction of eyelid position. This case emphasizes the need for long-term surveillance following orbital reconstruction and highlights effective management strategies for rare delayed implant extrusion.
DOI: 10.6084/m9.figshare.29648852.v1
title: Supplementary Material for: Delayed Extrusion of Hydroxyapatite Cement Orbital Floor Implant: A Rare Case Report of Augmentation Failure

description: Hydroxyapatite implants are widely used in orbital reconstruction due to their biocompatibility and capacity for osseointegration. Complications such as implant exposure or extrusion typically occur in the early postoperative period, with late-onset cases being exceedingly rare. This report presents a 78-year-old female who developed hydroxyapatite implant extrusion seven years after orbital volume augmentation for an anophthalmic socket. She presented with lower eyelid retraction, ectropion, redness, and a fistula in the inferior fornix. Surgical management included implant removal, placement of a dermis fat graft from the abdomen to restore orbital volume, and correction of eyelid deformities using a tarsal strip and full-thickness skin graft. Postoperatively, the patient achieved successful resolution of symptoms, restoration of orbital volume, and correction of eyelid position. This case emphasizes the need for long-term surveillance following orbital reconstruction and highlights effective management strategies for rare delayed implant extrusion.
DOI: 10.6084/m9.figshare.29648855
title: Supplementary Material for: Ocular Involvement in Disseminated Tuberculosis: A Case of Neuro-retinitis

description: Abstract
 
Introduction:
Neuro-retinitis is a rare ocular manifestation of disseminated tuberculosis (TB), often presenting with optic disc swelling and a macular star. Early diagnosis is essential to prevent permanent visual impairment, especially in TB-endemic areas where such presentations may be overlooked.
 
Case Presentation:
We report a case of a 38-year-old male who presented with a two-week history of progressive, painless vision loss in the left eye. Fundoscopy revealed optic disc swelling and a macular star, suggestive of neuro-retinitis. Systemic evaluation, including chest imaging and immunologic testing, confirmed disseminated TB. Other potential infectious and autoimmune causes were excluded. The patient was initiated on standard anti-tuberculosis therapy (isoniazid, rifampicin, pyrazinamide, and ethambutol) along with oral corticosteroids. At six-week follow-up, his visual acuity improved, and optic disc swelling had decreased.
 
Conclusion:
Neuro-retinitis may be the initial presenting feature of disseminated TB. Clinicians should consider TB in the differential diagnosis of neuro-retinitis, particularly in high-prevalence settings. Early systemic evaluation and prompt initiation of anti-tuberculosis therapy can lead to favorable visual and systemic outcomes.
DOI: 10.6084/m9.figshare.29648855.v1
title: Supplementary Material for: Ocular Involvement in Disseminated Tuberculosis: A Case of Neuro-retinitis

description: Abstract
 
Introduction:
Neuro-retinitis is a rare ocular manifestation of disseminated tuberculosis (TB), often presenting with optic disc swelling and a macular star. Early diagnosis is essential to prevent permanent visual impairment, especially in TB-endemic areas where such presentations may be overlooked.
 
Case Presentation:
We report a case of a 38-year-old male who presented with a two-week history of progressive, painless vision loss in the left eye. Fundoscopy revealed optic disc swelling and a macular star, suggestive of neuro-retinitis. Systemic evaluation, including chest imaging and immunologic testing, confirmed disseminated TB. Other potential infectious and autoimmune causes were excluded. The patient was initiated on standard anti-tuberculosis therapy (isoniazid, rifampicin, pyrazinamide, and ethambutol) along with oral corticosteroids. At six-week follow-up, his visual acuity improved, and optic disc swelling had decreased.
 
Conclusion:
Neuro-retinitis may be the initial presenting feature of disseminated TB. Clinicians should consider TB in the differential diagnosis of neuro-retinitis, particularly in high-prevalence settings. Early systemic evaluation and prompt initiation of anti-tuberculosis therapy can lead to favorable visual and systemic outcomes.
DOI: 10.15468/dl.7qmxvd
title: Occurrence Download

description: A dataset containing 93067 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Calidris falcinellus)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 93067 records from 198 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049489-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.