cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5gb3f
title: MassIVE MSV000085666 - Mono- and biallelic protein truncating variants in alpha-actinin 2 cause contractile dysfunction and cardiomyopathy in humans
title: Cardiomyopathy is a common cause of sudden cardiac death in children and adolescents, and a disease that often requires heart transplantation. Alpha-actinin 2 is a critical cytoskeletal protein that anchors actin filaments within the cardiac sarcomere. Mutations in ACTN2 have been associated with cardiac abnormalities, including arrhythmias, hypertrophic, and dilated cardiomyopathies. However, the pathogenic mechanisms linking ACTN2 mutations to cardiac dysfunction remain poorly understood. Here, we characterize a patient homozygous for a stop-gain mutation (p.Q860X) in ACTN2 and a family heterozygous for a large exon 8-10 deletion and a small insertion. Patient-specific hiPSC-CMs from both families were hypertrophic, displayed sarcomeric structural disarray and had impaired contractility compared to control hiPSC-CMs. In explanted cardiac tissue of the patient with the homozygous stop-gain mutation, we observed mild hypertrophy and interstitial fibrosis. There was no evidence of variation in ACTN2 protein expression. The family heterozygous for the large exon 8-10 indel expressed the truncated protein in hiPSC-CMs, with subsequent incorporation into cardiac sarcomeres, leading to severe structural abnormalities observed through electron microscopy. In the homozygous patient, we used co-immunoprecipitation for ACTN2, followed by mass-spectrometry to investigate if lack of a C-terminal interacting protein may explain the pathogenic phenotype. We found an intricate ACTN2 interactome with many membrane-associated proteins and identified a missing protein-protein interaction with ACTN1 and GJA1 in the patient with the truncated ACTN2 variant. The association with ACTN1 and GJA1 was verified using colocalization and lack of interaction in patient hiPSC-CMs was further demonstrated with co-immunoprecipitation followed by Western blot for ACTN1. In summary, we provide evidence that structural protein variation in ACTN2 is associated with contractile dysfunction and lead to cardiac abnormalities through distinct mechanisms within cardiac sarcomeres and loss of critical protein-protein interactions. Moreover, our successful modeling of ACTN2 genetic disease using hiPSC-CMs presents an opportunity to identify more targeted therapies. This could have great implications for young patients with early-onset cardiac disease.
DOI: 10.25345/c5m16q
title: MassIVE MSV000085665 - Glial secretome analysis of a mouse model of Rett syndrome
title: Secretome collection Mecp2 KO and WT Ultrafiltration TCEP reduction /MMTS alkylation/ Trypsin digestion 4 plex-iTRAQ labeling OFFgeel fractionation C18 zip-tip nanoLC-C18 connected to a MALDI plate spotter 4800 MALDI-TOF/TOF analysis (MS and MS/MS) Paragon search engine R package Isobar(TM) statistical software
DOI: 10.25345/c5qt8b
title: MassIVE MSV000085664 - Quantitative proteomic analysis of the tizoxanide effect in vero cells
title: Proteomic analysis of vero cells in the presence and absence of tizoxanide
DOI: 10.25345/c5vj15
title: MassIVE MSV000085663 - proteomicHDLDKD.MassIVE.quant/
title: Diabetes mellitus kidney disease (DKD) is associated with lipid derangements worsening kidney function and enhancing cardiovascular (CVD) risk. We analyzed HDL composition, proteome, chemical modification and functionality in non-dialytic DKD subjects categorized according to glomerular filtration rate (GFR) and urinary albumin excretion rate (AER).
DOI: 10.25345/c56t8p
title: MassIVE MSV000085668 - Supplementary information PNAS MS# 2020-05506
title: Quality control mechanisms targeting translationally stalled and C-terminally extended poly(GR) associated with ALS/FTD
DOI: 10.25345/c5bj2w
title: MassIVE MSV000085667 - GNPS Okinawan Marine Nudibranch Phyllidiella pustulosa
title: GNPS Phyllidiella pustulosa from Okinawan Nudibranch
DOI: 10.25345/c5db46
title: MassIVE Reanalysis RMSV000000331.1 - CoronaMassKB Hackathon: MassIVE/CCMS Maestro reanalysis of MSV000085507 / PXD019221 Proteomic and Metabolomic Characterization of COVID-19 Patient Sera
title: CoronaMassKB Hackathon: Early-access community reanalysis of mass spectrometry data. MassIVE/CCMS Maestro reanalysis of MSV000085507 / PXD019221 Proteomic and Metabolomic Characterization of COVID-19 Patient Sera
DOI: 10.25345/c5j45r
title: MassIVE MSV000085676 - ApoA-I and A-II Proteoforms and Cardiometabolism
title: Characterization and quantification of ApoA-I and ApoA-II proteoforms in 150 individuals from CARDIA cohort
DOI: 10.25345/c5nt8q
title: MassIVE MSV000085672 - Quantitative Proteomic Analysis of Mouse Fetal and Adult Hematopoietic Progenitor Cells
title: Quantitative proteomic analysis of mouse fetal and adult hematopoietic progenitor cells using TMT6plex and an SPS-MS3 method.
DOI: 10.25345/c5sn06
title: MassIVE MSV000085670 - Fructooligosaccharides are differentially distributed in root tissues of asparagus
title: proteome profiling of inner, middle and outer tissues of asparagus storage roots
DOI: 10.25345/c5xb23
title: MassIVE MSV000085669 - Siderophore Standard Mixture with mixed metal additions (Cu,Zn,Fe,Ni,Co,Mn)
title: A mixture of metals (Zn, Fe, Cu, Co, Zn, Ni, Mn) were infused into a siderophore standard mixture.
DOI: 10.25345/c51453
title: MassIVE MSV000085689 - Chlorella sp FC2 IITG nitrogen-limitation
title: The objective of this work is to define the metabolomic analysis of the microalgae due to nitrogen-limitation. We used unbiased metabolomics analysis of the FC2 from three nitrogen-limitation timepoints (40h, 88h, and 120h), representative of different nitrogen-limitation severity (mild, moderate, and severe), based on the varied neutral lipid accumulation.
DOI: 10.25345/c54t82
title: MassIVE MSV000085688 - GNPS LC-MS/MS analysis of mixtures of authentic standrds of Sulfametoxazol and Acetyl-Sulfametoxazol
title: GNPS LC-MS/MS analysis of mixtures of Sulfametoxazol and Acetyl-Sulfametoxazol for tool evaluation
DOI: 10.25345/c58m9m
title: MassIVE Reanalysis RMSV000000331.2 - CoronaMassKB Hackathon: MassIVE/CCMS MSStats on MS-GF+ reanalysis of MSV000085507 / PXD019221 Proteomic and Metabolomic Characterization of COVID-19 Patient Sera
title: CoronaMassKB Hackathon: Early-access community reanalysis of mass spectrometry data. MassIVE/CCMS MSStats on MS-GF+ reanalysis of MSV000085507 / PXD019221 Proteomic and Metabolomic Characterization of COVID-19 Patient Sera
DOI: 10.25345/c5wf2t
title: MassIVE MSV000085690 - Artemisia herba-alba Algeria Antico
title: Evaluation of anticorrosion properties of extracts of Artemisia herba-alba, Algeria
DOI: 10.25345/c56n0x
title: MassIVE MSV000085697 - Proof of Honey Adulteration by the Detection of Foreign Amylases and Quality Assessment of Honey
title: Two datasets from the nanoLC-MS/MS analysis are included. The first dataset was 38 honey samples that were analyzed in a single series in one replicate (this dataset is denoted 38; raw data are denoted 351-*). The second dataset was 7 honeys that were all prepared and analyzed in 3 replicates (this dataset is denoted 7x3; raw data are denoted 417-*). All the honeys in our dataset are denoted as we originally denoted them after addition to our collection. The honey samples include authentic honeys from verified sources and honeys from markets in Czechia or foreign countries, some of which were declared as single-origin honeys. Compressed (zipped) combined_txt folders of database searches in MaxQuant are included. In addition, used databases (*.fasta) are provided.
DOI: 10.25345/c57m99
title: MassIVE MSV000085695 - GNPS_2020-07-06_GUYANE_Venin_Polybia_occidentalis
title: Venom extract of the hymenoptera Polybia occidentalis from French Guiana
DOI: 10.25345/c5bf2v
title: MassIVE MSV000085696 - Bacillus cereus grown in different conditions representing different parts of its lifecycle
title: We grew B. cereus in triplicate in four media corresponding to four environments in which the bacteria can live in: a soil extract, a zucchini puree, a defined medium rich in amino acid and low in carbohydrates (modified AOAC medium M334), and a rich laboratory medium (LB).
DOI: 10.25345/c5cf3j
title: MassIVE MSV000085694 - Exploring the Sexual Dimorphism of Crustacean Neuropeptide Expression using Callinectus sapidus as a Model Organism
title: The impact of numerous diseases has been linked to differences in sex between organisms, including various neurological diseases. As neuropeptides are known to be key players in the nervous system, studying the variation of neuropeptidomic profiles between males and females in a crustacean model organism is of interest. By using high-resolution mass spectrometry with two complementary ionization sources in conjunction with quantitative chemical labeling, differences were observed in 5 key neural tissues and hemolymph.
DOI: 10.25345/c5h45f
title: MassIVE MSV000085693 - Metabolic detection of malignant brain gliomas through lipidomic analysis
title: Lipidomic analysis of malignant brain gliomas to search for biomarkers.
DOI: 10.25345/c5mx72
title: MassIVE MSV000085692 - Artemisia herba-albal anticorrosion mode -
title: Anticorrosion properties of extracts of Artemisia herba-alba from Algeria - Mode -
DOI: 10.25345/c5rm9z
title: MassIVE MSV000085691 - Artemisi herba-alba (Algeria) Anticorrosion properties
title: Evaluation of extracts of Artemisia herba-alba from Algeria for their anticorrosion properties
DOI: 10.25345/c52h8b
title: MassIVE MSV000085627 - Drosophila indirect flight muscle
title: LC-MS/MS analysis of peptide digests of myofibrils from wild type and Dmlc2(Delta 2-46; S66A, S67A) mutant Drosophila flies. Myofibrils and thick filament samples were solubilized in 150 ul 0.1% RapiGest SF Surfactant (Waters Corporation; 50 C, 1 hour). Proteins were reduced by addition of 0.75 ul of 1M dithiothreitol and heating (100 C, 10 min). Cysteines were alkylated by addition of 22.5 ul of 100 mM iodoacetamide in 50 mM ammonium bicarbonate and incubation in the dark (22C, 30 min). Proteins were digested to peptides by addition of 25 ul of 50 mM ammonium bicarbonate containing 5 ug of trypsin (Promega) and incubating (37 C, 18 hours). The samples were dried down in speed vacuum device. Trypsin was deactivated and RapiGest was cleaved by addition of 100 ul of 7% formic acid in 50 mM ammonium bicarbonate and heating (37 C, 1 hour). The resultant peptides were dried down. RapiGest was cleaved again by addition of 100 ul of 0.1% trifluoroacetic acid and heating (37 C, 1 hour). The resultant peptides were dried down and reconstituted a final time in 60 ul of 0.1% trifluoroacetic acid. The samples were centrifuged at 18,800 RCF for 5 minutes (Thermo, Sorvall Legend Micro 21R) to pellet the surfactant. The top 57 ul of solution was transferred into a mass spectrometry (MS) analysis vial. A 20 ul aliquot of each sample was injected onto an Acquity UPLC HSS T3 column (100 A, 1.8 um, 1 x 150 mm) (Waters Corporation) attached to a UltiMate 3000 ultra-high pressure liquid chromatography (UHPLC) system (Dionex). The peptides were separated and the UHPLC effluent was directly infused into a Q Exactive Hybrid Quadrupole-Orbitrap mass spectrometer (MS) through an electrospray ionization source (Thermo Fisher Scientific). Data were collected in data-dependent MS/MS mode with the top five most abundant ions being selected for fragmentation.
DOI: 10.25345/c52x73
title: MassIVE MSV000085698 - Multi-omic comparison of Alzheimers variants in human ESC-derived microglia reveals convergence at APOE
title: Variations in many genes linked to sporadic Alzheimers disease (AD), show abundant expression in microglia, however, relationships between these genes remain largely elusive. Here, we establish isogenic human ES-derived microglia-like cell lines (hMGLs) harboring AD variants in CD33, INPP5D, SORL1 and TREM2 loci, and curate a comprehensive atlas comprising ATACseq, ChIPseq, RNAseq and proteomics datasets. AD-like expression signatures are observed in AD mutant SORL1 and TREM2 hMGLs, while integrative multi-omic analysis of combined epigenetic and expression datasets indicates upregulation of APOE as a convergent pathogenic node. We also observe cross-regulatory relationships between SORL1 and TREM2, where SORL1R744X hMGLs induce TREM2 expression to enhance APOE expression. AD-associated SORL1 and TREM2 mutations also impaired hMGL A-beta uptake in an APOE-dependent manner in vitro, and attenuated A-beta uptake/clearance in mouse AD brain xenotransplants. Utilizing this modeling and analysis platform for human microglia, we provide new insight into epistatic interactions in AD genes and demonstrate convergence of microglial AD genes at the APOE locus
DOI: 10.25345/c56715
title: MassIVE MSV000085626 - The OGT TPR Interactome defined by BioID
title: BioID performed in HeLa cells for the TPR domain of The O-GlcNAc Transferase and eGFP (negative control). Used to determine TPR interactors and the TPR interactome in HeLa cells. Three biological replicates were performed, with each replicate having an experimental (TPR-BirA*) and negative (eGFP-BirA*) condition, and each condition was split into four fractions during in-gel digest for mass spectrometry.
DOI: 10.25345/c5b14g
title: MassIVE MSV000085625 - Yersiniabactin_mixed_metal_infusion
title: A mixture of metals (Fe, Cu, Co, Zn, Ni) was added to commercial yersiniabactin at 3 pH values (pH 2, 6,8)
DOI: 10.25345/c5fq49
title: MassIVE MSV000085624 - GNPS-All HE extracts of CV. 20.06.19
title: Detection of novel compounds between different varieties of CV
DOI: 10.25345/c5pr09
title: MassIVE MSV000085701 - BRG1 loss predisposes lung cancers to replicative stress and ATR dependency
title: Gupta M, Concepcion CP, Fahey CG, Keshishian H, Bhutkar A, Brainson CF, Sanchez-Rivera FJ, Pessina P, Kim JY, Simoneau A, Paschini M, Beytagh MC, Stanclift C, Schenone M, Mani DR, Li C, Oh A, Li F, Hu H, Karatza A, Bronson RT, Shaw AT, Hata AN, Wong K, Zou L, Carr SA, Jacks T, Kim CF. Cancer Res 2020. Inactivation of SMARCA4/BRG1, the core ATPase subunit of mammalian SWI/SNF complexes, occurs at very high frequencies in non-small cell lung cancers. There are no targeted therapies for this subset of lung cancers, nor is it known how mutations in BRG1 contribute to lung cancer progression. Using a combination of gain- and loss-of-function approaches, we demonstrate that deletion of BRG1 in lung cancer leads to activation of replication stress responses. Single-molecule assessment of replication fork dynamics in BRG1-deficient cells revealed increased origin firing, mediated through pre-licensing protein CDC6. Quantitative mass spectrometry and co-immunoprecipitation assays showed that BRG1-containing SWI/SNF complexes interact with RPA complexes. Lastly, we show that BRG1-deficient lung cancers are sensitive to the pharmacological inhibition of ATR. These findings provide novel mechanistic insight into BRG1-mutant lung cancers and suggest that their ATR dependency can be leveraged therapeutically, and potentially expanded to BRG1- mutant cancers in other tissues.
DOI: 10.25345/c5tf1t
title: MassIVE MSV000085700 - PPM1D truncating mutations enhance formation of Diffuse Midline Gliomas through effects on cell cycle and DNA repair pathways
title: Khadka P, Reitman ZJ, Lu S, Buchan G, Gionet G, Dubois F, Carvalho DM, Greenwald N, Zack T, Shapira O, Pelton K, Hartley R, Bear H, Georgis Y, Jarmale S, Schoolcraft K, Miller PG, Condurat AL, Gonzalez E, Qian K, Guerra-Garcia ME, Sinai CE, Becker S, Schneider R, Vogelzang J, Melanson R, Keshishian H, Goodale A, Abid T, Perskey N, Piccioni F, Root D, Chowdhury D, Carr SA, Ebert BL, Fuller C, Kieran MW, Jones C, Ligon KL, Beroukhim R, Phoenix TN, and Bandopadhayay P. 2020. Truncating mutations in exon 6 of the protein phosphatase PPM1D (WIP1) have previously been reported in H3K27M-mutant Diffuse Midline Gliomas (DMG) as well as other cancers such as endometrial cancer and leukemia. However, their role in de novo gliomagenesis in the context of histone mutations has not been explored. Here, we find that truncating mutations in PPM1D are clonal driver events in 8% of primary DMGs. We show that PPM1D mutation potentiates DMG oncogenesis in vivo and that PPM1D activity is required for tumor maintenance, thereby presenting a potential therapeutic opportunity. Using comprehensive phosphoproteomic and functional genomics assays, we find that the oncogenic effects of PPM1D truncation are primarily mediated by disruption of cell cycle, DNA damage repair, and p53 pathways, and that these also present potential therapeutic opportunities. These findings nominate PPM1D mutations as a targetable driver of pediatric gliomas.
DOI: 10.25345/c5xq51
title: MassIVE MSV000085628 - Kawashima_Phosphorylation_PHLPP1_2020_TripleTOF6600
title: This dataset consists of 20 raw MS files and associated peak lists and result files, acquired on AB SCIEX 6600 TripleTOF mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by Cassandra Wong. Affinity purifications, mass spectrometry acquisition and analysis were also performed by Cassandra Wong under the supervision Anne-Claude Gingras. The files are associated with a manuscript submitted for publication by Agnieszka T. Kawashima et al. The main goal of this paper was to identify cell cycle dependent regulation of PHLPP1 and its interaction with mitotic proteins. Alexandra Newton is the corresponding author of the manuscript (anewton@health.ucsd.edu); Anne-Claude Gingras should be contacted for questions on this dataset (gingras@lunenfeld.ca).
DOI: 10.25345/c5z744
title: MassIVE MSV000085699 - A case study of caffeine alkaline hydrolysis to camellimidazoles
title: Camellimidazoles were recently reported as new natural substances in Keemun black tea. Although a biosynthetic route to these intriguing imidazole dimers was proposed from caffeine by the authors in this seminal report, we envisioned that a artefactual scenario, consisting of alkaline hydrolysis of caffeine and spontaneous cascade reactions with a methylene donor such as formaldehyde or methylene chloride, could also have led to their formation. To capture the diversity of molecules obtained in these conditions (i. e. alkaline treatment of caffeine/formaldehyde), an in silico MetWork-based pipeline was implemented, highlighting the sought-after camellimidazoles B and C. A wealth of further compounds were also tagged, notably comprising the herein newly described and unnatural camellimidazoles D, E and F that were subsequently confirmed as anticipated in silico upon extensive spectroscopic analyses. Likewise, camellimidazoles B and C could also be obtained using methylene chloride as an alternative methylene donor which may also have occurred in the initial phytochemical pipeline that implied this solvent. 3B: Raw files used to generate Fig. 3B. S6 : Raw files used to generate Fig. S6.
DOI: 10.25345/c51h7n
title: MassIVE Reanalysis RMSV000000309.4 - Testing reanalysis DOI request [1]
title: This is a test reanalysis. It is only being submitted as a test of the reanalysis attachment workflow functionality.
DOI: 10.25345/c5599k
title: MassIVE Reanalysis RMSV000000236.1 - Test Reanalysis Attachment - MS-GF+
title: This is a test of the reanalysis attachment workflow. These are some more words to satisfy the arbitrary minimum description length requirement.
DOI: 10.25345/c59145
title: MassIVE MSV000079535 - VM transition - partial dataset submission regression test - 02/26/16 [5]
title: This is a test dataset. It has no scientific value. It is merely being submitted to test the basic functionality of the dataset submission workflow.
DOI: 10.25345/c5dt5d
title: MassIVE Reanalysis RMSV000000235.1 - Test Reanalysis Attachment
title: This is a test of the reanalysis attachment workflow. These are some more words to satisfy the arbitrary minimum description length requirement.
DOI: 10.25345/c5jh8p
title: MassIVE Reanalysis RMSV000000235.1 - Test Reanalysis Attachment
title: This is a test of the reanalysis attachment workflow. These are some more words to satisfy the arbitrary minimum description length requirement.
DOI: 10.25345/c5p71h
title: MassIVE MSV000079762 - Testing dataset submission from task import [1]
title: This is a test to verify that dataset submissions can work when the source files for the dataset all originate from imported ProteoSAFe analysis tasks run separately.
DOI: 10.25345/c5t14t
title: MassIVE MSV000085629 - DUSP7 Regulates the Activity of ERK2 to Promote Proper Chromosome Alignment During Cell Division
title: DUSP7 Regulates the Activity of ERK2 to Promote Proper Chromosome Alignment During Cell Division
DOI: 10.25345/c5wt64
title: MassIVE Reanalysis RMSV000000309.5 - Testing reanalysis DOI request [2]
title: This is a test reanalysis. It is only being submitted as a test of the reanalysis attachment workflow functionality.
DOI: 10.25345/c50h7b
title: MassIVE Reanalysis RMSV000000006.2 - MSGF+ 1% FDR - 50 ppm precursor mass tolerance
title: Automated MSGF-PLUS-AMBIGUITY reanalysis of dataset MSV000079593 at 1% FDR with 50 ppm precursor mass tolerance.
DOI: 10.25345/c54b06
title: MassIVE Reanalysis RMSV000000004.9 - MSGF+ 1% FDR - 50 ppm precursor mass tolerance
title: Automated MSGF-PLUS-AMBIGUITY reanalysis of dataset MSV000079852 at 1% FDR with 50 ppm precursor mass tolerance.
DOI: 10.25345/c5813g
title: MassIVE Reanalysis RMSV000000001.1 - MSV000079843 test reanalysis #1
title: MSV000079843 Skyline reanalysis, result set 1 - "reanlz-01-Skyline-15cut-nosingle"
DOI: 10.25345/c5ct6g
title: MassIVE MSV000085631 - Proteome dynamics of PSU-ALWS40NE cells in response to anoxia
title: PI: Experiments and cell line exposures were performed in the laboratory of Prof. Jason Podrabsky at Portland State University (OR). Proteomics contact: Proteomics sample preparation, biological mass spectrometry, and post-acquisition LCMS data analyses were performed in the laboratory of Prof. Dietmar Kueltz laboratory at UC Davis (CA).
DOI: 10.25345/c5gm7q
title: MassIVE Reanalysis RMSV000000009.3 - MSGF+ 1% FDR - 50 ppm precursor mass tolerance
title: Automated MSGF-PLUS-AMBIGUITY reanalysis of dataset MSV000079935 at 1% FDR with 50 ppm precursor mass tolerance.
DOI: 10.25345/c5hh70
title: MassIVE MSV000085630 - Chemical biology approach for the controllability of dynamic protein networks
title: Controllability of protein-protein interaction (PPI) networks is an evolving area of research where unbiased predictions based on computational analyses are being developed to understand disease mechanisms and discover treatments. Herein, we leverage discoveries in the biology of cellular stress linking cellular vulnerability to hyperconnectivity in PPI networks to propose a method for engineering PPI network controllability.
DOI: 10.25345/c5nb0v
title: MassIVE Reanalysis RMSV000000236.2 - Testing reanalysis DOI request [1]
title: This is a test of the reanalysis attachment workflow. These are some more words to satisfy the arbitrary minimum description length requirement.
DOI: 10.25345/c5r13t
title: MassIVE Reanalysis RMSV000000007.5 - MSGF+ 1% FDR - 50 ppm precursor mass tolerance
title: Automated MSGF-PLUS-AMBIGUITY reanalysis of dataset MSV000079526 at 1% FDR with 50 ppm precursor mass tolerance.
DOI: 10.25345/c5s134
title: MassIVE Reanalysis RMSV000000309.6 - Testing reanalysis DOI request [3]
title: This is a test reanalysis. It is only being submitted as a test of the reanalysis attachment workflow functionality.
DOI: 10.25345/c5vt6t
title: MassIVE Reanalysis RMSV000000006.2 - MSGF+ 1% FDR - 50 ppm precursor mass tolerance
title: Automated MSGF-PLUS-AMBIGUITY reanalysis of dataset MSV000079593 at 1% FDR with 50 ppm precursor mass tolerance.
DOI: 10.25345/c53b0w
title: MassIVE Reanalysis RMSV000000014.2 - MSGF+ 1% FDR - 50 ppm precursor mass tolerance
title: Automated MSGF-PLUS-AMBIGUITY reanalysis of dataset MSV000080014 at 1% FDR with 50 ppm precursor mass tolerance.
DOI: 10.25345/c5741f
title: MassIVE Reanalysis RMSV000000011.3 - MSGF+ 1% FDR - 50 ppm precursor mass tolerance
title: Automated MSGF-PLUS-AMBIGUITY reanalysis of dataset MSV000079945 at 1% FDR with 50 ppm precursor mass tolerance.