cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/dzghd277fj
title: DOE analysis for modifying formulation.

description: Addition of TiO2-NPs to the polymer matrix will improve the mechanical properties of bio-polymer without having negative effect on bio-degradability. Also, a composition of CMC and TiO2-NPs in starch base polymer will result to good quality product. for this purpose, design of experiments (DOE) technique is suitable method.
DOI: 10.17632/x8684dv4yj
title: PBK induces pulmonary fibrosis via activating p53/ACVR1C/Smad-mediated epithelial-mesenchymal transition

description: This included full length uncropped original western blots used in the manuscript "PBK induces pulmonary fibrosis via activating p53/ACVR1C/Smad-mediated epithelial-mesenchymal transition".
DOI: 10.17632/2mpx85xt6g
title: Synergetic laser-electronic sensor array dataset

description: This dataset contains experimental data from a photonic-collaborative sensor array. The array is composed of three distinct types of sensors, including one laser sensor and two metal oxide semiconductor (MOX) sensors. The laser sensor (model: YZ-MF-100L), manufactured by Yizhuo (China), is primarily used for detecting methane (CH₄) gas, with a concentration range of 0%-100% LEL (Lower Explosion Limit). The two MOX sensors, GM-602 and GM-702, are both produced by Winsen (China). The GM-602 sensor is designed for detecting multiple gases, including hydrogen sulfide (H₂S), ammonia (NH₃), methane (CH₄), and ethanol (C₂H₅OH), with a concentration range of 0-50ppm. The GM-702 sensor is specifically used for detecting carbon monoxide (CO), methane (CH₄), and hydrogen (H₂), with a concentration range of 0-5000ppm. The sensor array is configured to monitor and analyze the concentration variations of specific gases, providing accurate environmental monitoring data.
DOI: 10.6084/m9.figshare.25927135.v1
title: H19_Wh

description: Energy related data for House 19
DOI: 10.6084/m9.figshare.8206559.v1
title: pen

description: It is the very tip of a ballpoint pen.
DOI: 10.17632/8nhw2x82yz
title: Design and Development of iChip: A Novel Isolation Chip by STIKES ISFI Banjarmasin

description: Design of devices for isolation chip (iChip). A. iChip device and B. iChip detail size
DOI: 10.17632/bss3nybt75
title: Understanding Organizational Structure in SAP ABAP HCM

description: The organizational structure in SAP plays a crucial role in managing business processes efficiently. In SAP HCM (Human Capital Management), this structure defines hierarchies, organizational units, and relationships between employees. This article explores how to read and interpret the organizational structure using ABAP.
DOI: 10.17632/8dfh3fbmkd
title: Gearshift Controller Optimization  for Electric Vehicles with Reinforcement Learning

description: This article proposes an optimization method for electric vehicle dual-clutch transmission gearshift controllers. A feedforward-feedback control model is established, and the feedback controller is an RBFNN controller optimized by the PILCO algorithm. The control effect of the proposed method is compared with the PID feedback controller. Applying the learned controller to various slope and load circumstances demonstrates its optimization effectiveness with good robustness. The PILCO algorithm requires only a few experiments for optimization, making it a useful tool for engineers and technicians to increase the effectiveness of their Research and Development for various gearshift controllers.
DOI: 10.17632/ffkvft27ds
title: Distinct immunological signatures discriminate severe COVID-19 from non-SARS-CoV-2-driven critical pneumonia

description: Stefanie Kreutmair, Susanne Unger, Nicolás Gonzalo Núñez, Florian Ingelfinger, Chiara Alberti, Donatella De Feo, Sinduya Krishnarajah, Manuel Kauffmann, Ekaterina Friebel, Sepideh Babaei, Benjamin Gaborit, Mirjam Lutz, Nicole Puertas Jurado, Nisar P. Malek, Siri Goepel, Peter Rosenberger, Helene A. Häberle, Ikram Ayoub, Sally Al-Hajj, Jakob Nilsson, Manfred Classen, Roland Liblau, Guillaume Martin-Blondel, Michael Bitzer, Antoine Roquilly, Burkhard Becher* Correspondence to: becher@immunology.uzh.ch
DOI: 10.17632/nbb8p6xcyc
title: LINF_140018100

description: Small GTPase-like protein | Flp3; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.11347751.v3
title: Platanus orientalis chorology

description: Distribution map of Oriental plane (<i>Platanus orientalis</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn"). <br>Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com). <br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007 <br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.6084/m9.figshare.21077002.v1
title: Honeysuckle Dataset.xlsx

description: Contains bird point count data from three natural areas in Defiance County, OH. Additionally contains data on arthropods collected from shrubs randomly sampled within the point count radius.
DOI: 10.17632/wyknzwphzt
title: How Effective are Ionization-State Based QSPKR Models at Predicting Pharmacokinetic Parameters in Humans?

description: Data used for modelling pharmacokinetic endpoints. Supplementary material including molecule names and identifiers and csv files for training and test sets.
DOI: 10.6084/m9.figshare.26771029.v1
title: Supplementary Material for: Prediction of 28-day all-cause mortality in heart failure patients with Clostridioides difficile infection using machine learning models: evidence from the MIMIC-IV database

description: Introduction
Heart Failure (HF) may induce bowel hypoperfusion, leading to hypoxia of the villa of the bowel wall and the occurrence of Clostridioides difficile infection (CDI). However, the risk factors for the development of CDI in HF patients have yet to be fully illustrated, especially because of a lack of evidence from real-world data.
Methods: 
Clinical data and survival situations of HF patients with CDI admitted to ICU were extracted from the Medical Information Mart for Intensive Care (MIMIC)-IV database. For developing a model that can predict 28-day all-cause mortality in HF patients with CDI, the Recursive Feature Elimination with Cross-Validation (RFE-CV) method was used for feature selection. And nine machine learning (ML) algorithms, including logistic regression (LR), decision tree (DT), bayesian, adaptive boosting (AdaBoost), random forest (RF), gradient boosting decision tree (GBDT), XGBoost, light gradient boosting machine (LightGBM), and categorical boosting (CatBoost) were applied for model construction. After training and hyperparameter optimization of the models through grid search 5-fold cross-validation, the performance of models was evaluated by the area under curve (AUC), accuracy, sensitivity, specificity, precision, negative predictive value, and F1 score. Furthermore, the SHapley Additive exPlanations (SHAP) method was used to interpret the optimal model.
Results:
A total of 526 HF patients with CDI were included in the study, of whom 99 cases (18.8%) experienced death within 28 days. 18 of the 57 variables were selected for the model construction algorithm for model construction. Among the ML models considered, the RF model emerged as the optimal model achieving the accuracy, F1-score, and AUC values of 0.821, 0.596, and 0.864 respectively. The net benefit of the model surpassed other models at 16%~22% threshold probabilities based on decision curve analysis. According to the importance of features in the RF model, red blood cell distribution width, blood urea nitrogen, Simplified Acute Physiology Score II, Sequential Organ Failure Assessment, and white blood cell count were highlighted as the five most influential variables.
Conclusions:
We developed ML models to predict 28-day all-cause mortality in HF patients associated with CDI in the ICU, which are more effective than the conventional logistic regression model. The RF model has the best performance among all the ML models employed. It may be useful to help clinicians identify high-risk HF patients with CDI.
DOI: 10.15468/dl.h6rmg2
title: Occurrence Download

description: A dataset containing 225 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Gymnosoma rotundatum (Linnaeus, 1758)"
 ]
}

 The dataset includes 225 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009253-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/475krhdcy3
title: Market Reaction on Earnings Announcement Information Contents: Analysis from Book-to-market

description: The data provide event study market model calculation for 621 firms from a population of 634 firms to assess Indonesia equity market reaction on earnings announcement information content by using book-to-market as the proxy. The data include calculation of CAR, CAAR, Book-to-market value, stock prices, composite index, et cetera.
DOI: 10.17632/nv5dhfj86t
title: Digital rock dataset for use in machine learning research of permeability prediction

description: Digital rock dataset for use in machine learning research of permeability prediction
DOI: 10.6084/m9.figshare.22814327.v1
title: Road salt and mosquito sex ratios

description: Data on road salt and mosquito sex ratios.
DOI: 10.17632/dz6zmjn88k
title: LT-FS-ID: Intrusion detection data WSNs

description: This dataset is consist of five columns. The first four columns represent the input features (i.e., area, sensing range, transmission range, and the number of sensors).  The last column represents the response variable or target variable (i.e., number of barriers). Through this dataset, we can set up a regression model to predict the number of barriers required for fast intrusion detection and prevention in machine learning.
DOI: 10.6084/m9.figshare.14579349.v1
title: Leaf morphological database of Quercus aquifolioides

description: <b>Leaf </b><b>morphological data</b><b> for all samples in TXT format (before genetic classification)</b>Leaf morphological data for all samples of Quercus aquifolioides across in Southwest China, produced Image J program by in TXT format. (1,435 leaves in total)LEAF_All_1435.txt Leaf morphological data for 1,365 leaves divided by STRUCTURE results, produced Image J program by in TXT format.Leaf morphological data for 1,365 leaves divided by STRUCTURE results of Quercus aquifolioides across in Southwest China, produced Image J program by in TXT format. (as input data of Principal Component Analyses (PCAs), two-block partial least-squares (2B-PLS) analysis, canonical variate analysis (CVA) and discriminant analysis (DA) in Morpho J software)LEAF_cluster_1365.txt<b> </b>Leaf morphological data for a subsample of 290 leaves repeatedly marked, produced by Image J in TXT format.Leaf morphological data for a subsample of 290 leaves repeatedly marked of Quercus aquifolioides across in Soutnwest China, produced by Image J in TXT format. (as input data of Procrustes ANOVA in Morpho J software) LEAF_repeat_290.txt<br>
DOI: 10.6084/m9.figshare.21971270.v2
title: EFFICIENCY LEVEL OF HALAL FOOD AND BEVERAGE COMPANIES AND MARKET VALUE IN SELECTED COUNTRIES

description: This is the raw data which are taken from OSIRIS database, investing.com and companies financial annual review website.
DOI: 10.17632/tyz8zb9shk
title: Database: Integration of the SECI model and ChatGPT in higher education

description: Results obtained in the 4 phases of the SECI process, corresponding to university students. The results are categorical on a Likert scale from 1 to 5. They are in .sav format, which belongs to the IBM SPSS Statistics program.
DOI: 10.17632/3spgyycbbb
title: Data of: Spatial distribution patterns, abundance and reproductive effort of the starfish Echinaster (Othilia) paucispinus along an environmental gradient in a Caribbean mangrove ecosystem. Marine Biodiversity, 49, 325–332

description: Reproducive data about Echinaster (Othilia) paucispinus in La Restinga National Park, Margarita Island, Venezuela.
DOI: 10.17632/9k3xvh9ydt
title: Keeping order in the brain: the supramarginal gyrus and serial order in short-term memory - dataset and materials

description: Dataset and materials for the rTMS study "Keeping order in the brains: the supramarginal gyrus and serial order in short-term memory". In the "Experiment folders" there are the E-Prime script of the tasks and the stimuli used. In the "Database and all anlysis" folder, there is the anonymus excel database of all 4 experiments and the Statistica workbook with all the analyses conducted and reported in the paper.
DOI: 10.17632/mptd3nfybr
title: LIC streamlines of a sweeping jet emitted from the master-slave fluidic oscillator

description: This is a video of the LIC streamlines of a sweeping jet ejected from a master-slave fluidic oscillator which can decouple the oscillation frequency and spreading angle from the inlet flow rate. It shows the motion patterns of the sweeping jet in the near-field, the far-field, and the free shear layer in one cycle measured by two-dimensional TR-PIV. The working condition is Re = 3893, and the flow rate ratio between the master and the slave layer is 1. More detailed technical descriptions of the master-slave fluidic oscillator can be found in the academic paper https://doi.org/10.1016/j.cja.2020.12.013.
DOI: 10.17632/zf2b2ngb34
title: Dataset of the variation, source, and environment impact of chloride across China: Summarized field results based on the aerosol mass spectrometer (AMS)

description: The chemical species mass concentration in NR-PM1 across China and Cl- time series of six tipical observations
DOI: 10.6084/m9.figshare.6179573.v1
title: Three-level performance-based optimization method of steel frames

description: Abstract This paper describes a three-level performance-based optimization model and an estimate method of residual top displacement for steel frames at three earthquake levels. The steel frames are supposed to be elastic at frequent earthquake, inelastic and hardening at occasional and rare earthquakes, respectively. The estimate formula is derived and estimate procedure is given in detail. The estimate method only needs to use (only) one pushover analysis until steel frames yield. The yield point is obtained automatically in the proposed method. The estimate method is able to make optimization process uninterrupted. Optimal design of a 3-story 2-bay steel frame is demonstrated to validate the proposed method.
DOI: 10.17632/7pzyy4g6bx
title: Spatial Localization of Anterior Precuneus for Bodily Self Validated with Brain Stimulation

description: # SELF-project-Neuron: Causal Evidence for the Processing of Bodily Self in the Anterior Precuneus
---
The repository contains the group-based ROI of self-hot electrodes and self-cold electrodes in the posteromedial cortex, and some key customized codes for generating the results of paper.

## Description of the data and file structure
- ROIs

The two nifti files are group-based ROIs from the study. With brain stimulation, we found a distinct area in the anterior precuneus that can induce robust subjective changes that are related to self-location displacement (sometimes self-dissociation). These stimulation sites are labelled "hot", while the surrounding posteromedial (PMC, or otherwise addressed as posterior cingulate cortex/precuneus) sites that did not induce such an effect are labelled "cold". The method of extracting the native coordinates of these stimulation sites is presented in the extractSbjNativeCoord.m. By transforming the individual brain to the standardized MNI space, we generated the presented ROIs by summarizing the spatial location of these stimulation sites (using 4mm-radius sphere). The ROIs are plotted in the provided figure ROI_vis.png, where the yellow color indicates hot sites. We hope these ROIs will be helpful for people who are interested in studying self-related processing, PMC heterogeneity and many other. 

- fMRI/FC_results:

HCP100Cohort and StanfordCohort respectively contains the group-level seed-based FC results from human connectom project open-access data (N=100, unrelated healthy young adults) and from our own cohort (N=5) where the hot/cold electrodes were identified individually. The subfolders with a suffix of "selfHot"/"selfCold"/"selfContr" respectively means the FC of the hot sites for the bodily self, the cold sites for it and the contrast between them. Among the nifti files, the xxx_0001.nii and xxx_0002.nii are associated with positive and negative contrasts, i.e. positive and negative connectivities, while the prefix of "beta", "con" and "spmT" indicates the image type (i.e., spmT is t-score images, beta is beta-coefficient images). When the suffix of an image is thr, it is a thresholded image based on the cluster-level significance (i.e. significant clusters), and a "**_bin.nii" is a binary image of the thresholded image (i.e. significant cluster mask). The resulting significance table is presented in the *.csv files. 

- CCEP

The CCEP_result_barplots.Rmd has the code for generating the barplot presented in the Figure 4 of the paper, and the prelim_CCEP_explore5_2.m has the code for generating the brain 3D plots of the figure as well as the inflow/outflow CCEP videos.

## Code/Software
MATLAB >= 2019a
SPM12
DOI: 10.17632/gtthhhp9wz
title: A natural mutation in a starch branching enzyme gene alters starch assembly in Pisum sativum L. (pea) and improves glucose homeostasis in humans
DOI: 10.17632/pdpj6f7wgj
title: Data of "Vanadium isotope fractionation in mantle rocks: constraints from peridotites and pyroxenites"

description: The aim of this study is to constrain V isotope fractionation under different mantle processes such as mantle melting, melt-rock interaction, and metasomatism. We thus collect a series of well-studied mantle rocks from peridotite massifs and xenolith. These data include Supplementary tables which comprise the chemical composition and the detail modeling results.
DOI: 10.6084/m9.figshare.22102289.v1
title: all Cyclic features of neutral closed shell molecules of ChEMBL and ZINC

description: 2 SMILES lists with all the cyclic features as detected by the following program : https://github.com/BenoitDamota/gcf <br> gcf1 includes the 11013 generic cyclic features of the neutral closed shell substances of ChEMBL25 as downloaded in September 2019. After converting the SMILES to a RDKit molecular graph object, the stereochemical information is removed. Then, only non-radical neutral compounds were retained whose SMILES writing does not contain formal charges. <br> The second list gcf2 include the 15431 generic cyclic features from the ZINC20 compounds. ZINC is larger than ChEMBL and is based on commercially available compounds and not restricted to bioactive molecules. It encompass in proportion more inorganic and organometallic compounds than ChEMBL. We have used the already prepared version ZINC20-ML by Artem Cherkasov and Francesco Gentile with all the 1,006,651,037 ZINC20 molecules as of early March 2021. ZINC20-ML is available at https://files.docking.org/zinc20-ML/. Again, this set has been filtered with the same procedure. <br>
DOI: 10.15468/dl.4dwyhg
title: Occurrence Download

description: A dataset containing 22075153 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geometridae"
 ]
}

 The dataset includes 22075153 records from 2932 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009239-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cy8zft
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nepeta kokamirica Regel"
 ]
}

 The dataset includes 21 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046903-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.573aqb
title: Occurrence Download

description: A dataset containing 631 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Columnea minor (Hook.) Hanst."
 ]
}

 The dataset includes 631 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003494-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kfafvx
title: Occurrence Download

description: A dataset containing 96619 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dromaius novaehollandiae (Latham, 1790))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 96619 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294211-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xpz5up
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lappa ×intermedia Simonk., 1878"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004104-230530130749713/datasets/export for details.
DOI: 10.15468/dl.asracp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nepeta komarovii E.A.Busch"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046905-230530130749713/datasets/export for details.
DOI: 10.15468/dl.j68g5w
title: Occurrence Download

description: A dataset containing 1531 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Registro de varamientos de megafauna marina en Ecuador continental"
 ]
}

 The dataset includes 1531 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0282152-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.