cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/jjdnpr356p
title: Cooking and Food Provisioning Action Scale (CAFPAS) - Revalidation and Empirical Application in the Czech Republic

description: The file includes primary data collected through a quantitative survey conducted in the Czech Republic between January and April 2021. Data in the survey were collected by a professional research agency, using the IBM Data Collection system. Data were gathered with a combination of several techniques that ensured the representativeness of the sample across different population groups.  For details see the original paper associated with the data file.

The available file includes original dataset in the SPSS Statistics Data File Format Family (.sav). The SPSS Statistics File Format is a proprietary binary format, developed and maintained as the native format for the SPSS statistical software application. 

The Cooking and Food Provisioning Action Scale allows researchers to examine people´s attitudes and skills associated with cooking and food preparation. The key feature of this scale – which also sets it apart from other food and cooking measuring instruments and tools – is its emphasis on food agency . The Cook and Food Provisioning Action Scale contains 28 questions classified into three groups (Self-efficacy, Attitude and Structure). For details on the CAFPAS see: Lahne, J., Wolfson, J. A., & Trubek, A. (2017). Development of the Cooking and Food Provisioning Action Scale (CAFPAS): A new measurement tool for individual cooking practice. Food Quality and Preference, 62, 96-105.
DOI: 10.25442/hku.24954680.v2
title: Greenspace data cube for 2022_Part1

description: Greenspace data cube for 2022
DOI: 10.6084/m9.figshare.17711141.v2
title: Excel Data-ICBT for PMS

description: We provide data generated in a randomized controlled trial carried out at residence halls of the Tabriz University of Medical Sciences. The study was conducted to investigate the effect of Internet-based cognitive-behavioral therapy (ICBT) on symptom severity and quality of life of Iranian female university students suffering from premenstrual syndrome (PMS). Moreover, the PMS-related disability and attitude toward menstruation were investigated. Internet-based cognitive-behavioral therapy with 92 female university students was included.
DOI: 10.6084/m9.figshare.17711348.v1
title: Dataset

description: Prepared datasets that support the findings of the study "Increased alcohol-specific mortality in Germany during COVID-19: state-level trends from 2010 to 2020".<br>
DOI: 10.6084/m9.figshare.26583526.v2
title: ML Based WAF-mitmproxy: csv and log files

description: Developing a machine learning based web application firewall using mitmproxy tool for real-time intrusion detection and prevention of vulnerabilities in web applications.
DOI: 10.6084/m9.figshare.22701186.v1
title: New material of <i>Miotragocerus</i> (Bovidae, Artiodactyla) from northern China and its systematic implications

description: Late Miocene tragoportacins are widespread in Eurasia and Africa and are important members of the <i>Hipparion</i> fauna. The phylogenetic relationships within the tragoportacins are debatable due to the large number of species, fragmentary materials, and large intraspecific variations. The Chinese tragoportacins are rare and poorly studied in previous work. Recently, a dozen well-preserved skulls were excavated from northern China, providing important information for the classification and phylogenetic analysis of the Chinese tragoportacins. In this study, we assign the new material from Linxia Basin and Fugu County to <i>Miotragocerus gregarius</i>, providing detailed descriptions of both males and females. We discuss sexual dimorphism and compare the horn core, dentition and cranium characters in <i>Miotragocerus</i>, <i>Tragoportax</i> and related species. We also perform cladistic analyses, including Eurasian and African tragoportacins, <i>Tetracerus</i> and <i>Eotragus</i>. The phylogenetic analysis indicates that the two Chinese late Miocene tragoportacins belong to <i>Miotragocerus</i> and <i>Tragoportax</i>, which immigrated from the west to China in different periods.
DOI: 10.6084/m9.figshare.25351267.v1
title: Puzzle-Pieces-Picker Dataset

description: <pre>Puzzle-Pieces-Picker Dataset<br></pre>
DOI: 10.6084/m9.figshare.16573115.v2
title: Plastid phylogenomic insights into relationships of all flowering plant families

description: <b>Background:</b> Flowering plants (angiosperms) are dominant components of the global terrestrial ecosystems, but phylogenetic relationships at the familial level and above remain only partially resolved, greatly impeding our understanding of their evolution and early diversification. The plastome, typically mapped as a ring-shaped genome, has been the most important molecular data source for plant phylogenetic reconstruction for decades. <b>Results:</b> Here we assembled by far the largest plastid dataset of angiosperms, composed of 80 genes from 4,792 plastomes of 4,660 species in 2,024 genera representing all currently recognized families. Our phylogenetic tree (PPA II) is essentially congruent with those of previous plastid phylogenomic analyses but generally provides greater clade support. In the PPA II tree, 75% of nodes at or above the ordinal level and 78% at or above the familial level were resolved with high bootstrap support (BP ≥ 90). We obtained strong support for many interordinal and interfamilial relationships that were poorly resolved previously within the core eudicots, such as Dilleniales, Saxifragales, and Vitales being resolved as successive sisters to the remaining rosids, and Santalales, Berberidopsidales, and Caryophyllales as successive sisters to the asterids. However, the placement of magnoliids, although resolved as sister to all other Mesangiospermae, is not well supported and disagrees with topologies inferred from nuclear data. Relationships among the five major clades of Mesangiospermae remain intractable despite increased sampling, probably due to an ancient radiation. <b>Conclusions:</b> We provide the most comprehensive dataset of plastome to date and robust phylogenetic relationships, which will serve as a firm basis for future evolutionary studies of flowering plants.
DOI: 10.6084/m9.figshare.4749727.v2
title: BAU Workshop Materials and Interaction Cards v1

description: A set of 'Customer Interaction Cards' and an accompanying set of workshop materials. These can be used to explore and design potential futures for Business as Unusual, and map novel customer journeys through these new models.
DOI: 10.17632/7fsmmsh5gh
title: Data set of Spatial distribution of stiffness between and within muscles in paretic and healthy individuals during prone and standing positions

description: Data presented the inter- and intramuscular variability of plantar flexors stiffness during prone and standing positions at different muscle lengths in healthy and paretic individuals. Shear wave elastography (SWE) measurements were carried out on two groups: control group and stroke survivor group. Shear Modulus (μ, kPa) within three plantar flexors (the gastrocnemius medialis [GM], gastrocnemius lateralis [GL], and soleus [SOL]) was obtained during two conditions: prone and standing position, at different angles of dorsiflexion (0◦, 10◦, and 20◦). Measurements were also performed in different proximo-distal regions of each muscle.
DOI: 10.17632/dd95bhn7mh
title: A long-term database of the Integrated Drought Index for Brazil from 2003 to 2023

description: The Integrated Drought Index (IDI) was developed at the National Center for Monitoring and Early Warning of Natural Disasters (Cemaden, www.cemaden.gov.br), in Brazil, to support the monitoring of agricultural drought. The index is a combination of three components: the 3-month Standardized Precipitation Index (SPI3), the Root Zone Soil Moisture (RZSM), and the Vegetation Health Index (VHI). The SPI3 is calculated from a long-term dataset of precipitation records in Brazil with a spatial resolution of 10 km (https://ftp.cptec.inpe.br/modelos/tempo/MERGE/). The RZSM is obtained from NASA's Gravity Recovery and Climate Experiment (GRACE; 2002-2017) and GRACE Follow On (GRACE-FO; 2018-present) satellites (https://nasagrace.unl.edu). The product is released weekly since 2003 with a spatial resolution of 25 km. The VHI is obtained from NOAA's polar-orbiting satellites, available weekly with a spatial resolution of approximately 4 km (https://www.star.nesdis.noaa.gov/smcd/emb/vci/VH/vh_ftp.php).
The IDI is used in Cemaden's continuous monitoring activities of drought over Brazil, including monthly meetings with stakeholders, preparing of reports on drought conditions, and updates of an online platform (https://mapasecas.cemaden.gov.br). A previous version of IDI without RZSM was already used in reports of droughts over Brazil, such as in Cunha et al. (2019, https://doi.org/10.3390/atmos10110642). The current version of IDI is routinely assessed against reports of yield losses and other drought indicators. A publication is currently being prepared to assess its spatial and temporal accuracy when compared with other indices. Preliminary results indicate good agreement with the Standardized Precipitation Evapotranspiration Index (SPEI).
This dataset contains a netCDF file (IDI3.nc) with the index in the variable IIS3. The variable has values ranging from 1 to 6, corresponding to the following drought classes: Exceptional, Extreme, Severe, Moderate, Weak, and Normal conditions.
DOI: 10.17632/g8n8w8snmj
title: Data for: Country-specific dietary shifts to mitigate climate and water crises

description: Includes input and output associated with the study model, a codebook with file and variable descriptions, and methodological comparisons with other studies. The model estimates the annual per capita and whole country greenhouse gas (GHG) and blue and green water footprints for nine diets and baseline consumption patterns specific to 140 countries. Input includes data on consumption patterns, international trade, scaling parameters for each item in each modeled diet, GHG and water footprints of individual food items, product and value fractions for processed items, item production by country, nutrient composition, and serving sizes. Additional details are provided in the codebook. Output includes the nutrient composition of each diet, and GHG and water footprints of whole diets presented at varying levels of granularity: (1) by country and diet, (2) by country, diet, and item group, and (3) by country, diet, item, and country of origin. Also provided are per-serving, per-kilocalorie, per-gram of protein, and per-kilogram footprints of common food groups. Additional details are provided in the codebook. "study_comparison" provides information on the methods and scope of the current study and of 99 prior studies on the GHG and/or water footprints of diets.
DOI: 10.6084/m9.figshare.19322963.v1
title: VCF files

description: Combined gVCF and SNP-Eff annotated VCF files of probiotic yeasts.
DOI: 10.6084/m9.figshare.19500128.v2
title: patches and local annotations, slide 093, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.28217315.v1
title: 3D photonic integration for ultra-low energy, high bandwidth inter-chip data links

description: Experimental data for all figures in the main manuscript of "3D photonic integration for ultra-low energy, high bandwidth inter-chip data links"
DOI: 10.6084/m9.figshare.3555393.v1
title: Appendix A. Proof that the C statistic of a d-sep test is a maximum likelihood estimate.

description: Proof that the C statistic of a d-sep test is a maximum likelihood estimate.
DOI: 10.6084/m9.figshare.7466642.v1
title: Science Podcast Database from Science podcasts: analysis of global production and output from 2004 to 2018

description: Excel spreadsheet containing all information used in this study of science podcasts.
DOI: 10.17632/hwrdzw26vk
title: Covid-19 and vaccine news dataset

description: This dataset contains the latest world news related to Covid-19 and Covid vaccine with the news article's available metadata.
DOI: 10.17632/j8xbwb93x9
title: BRAQUE: Bayesian Reduction for Amplified Quantization in UMAP Embedding. Supplementary data.

description: We propose a Bayesian Reduction for Amplified Quantization in Umap Embedding (BRAQUE) as an integrative novel approach, from data preprocessing to phenotype classification. BRAQUE starts with an innovative preprocessing, named Lognormal Shrinkage, able to enhance input fragmentation by fitting a lognormal mixture model and shrinking each component towards its median, in order to help further clustering step in finding more separated and clear clusters. The BRAQUE’s pipeline consist of a dimensionality reduction step performed using UMAP, and a clustering performed using HDBSCAN on UMAP embedding. These SUPPLEMENTAL DATA contain the csv image data files for seven lymphoid tissues, the antibody list and an MTA agreement letter for the CyBorgh software.
DOI: 10.17632/vmyn94prrr
title: Temporal spillover of private energy retrofitting: Distribution of home energy retrofits and implications for its subsidy policies

description: Dataset and analysis for the above-mentioned article, titled "Temporal spillover of private energy retrofitting: Distribution of home energy retrofits and implications for its subsidy policies".
DOI: 10.6084/m9.figshare.3550773.v1
title: Appendix D. Sampled points and manual classifications.

description: Sampled points and manual classifications.
DOI: 10.17632/sjtgzs42rc
title: tweezercalib 2.0: Faster version of MatLab package for precise calibration of optical tweezers

description: Abstract We present a vectorized version of the MatLab (MathWorks Inc.) package tweezercalib for calibration of optical tweezers with precision. The calibration is based on the power spectrum of the Brownian motion of a dielectric bead trapped in the tweezers. Precision is achieved by accounting for a number of factors that affect this power spectrum, as described in vs. 1 of the package [I.M. Tolić-Nørrelykke, K. Berg-Sørensen, H. Flyvbjerg, Matlab program for precision calibration of optical tweezer... Title of program: tweezercalib Catalogue Id: ADTV_v2_0 Nature of problem Calibrate optical tweezers with precision by fitting theory to experimental power spectrum of position of bead doing Brownian motion in incompressible fluid, possibly near microscope cover slip, while trapped in optical tweezers. Thereby determine spring constant of optical trap and conversion factor for arbitrary-units-to-nanometers for detection system. Versions of this program held in the CPC repository in Mendeley Data ADTV_v1_0; tweezercalib; 10.1016/j.cpc.2004.02.012 ADTV_v2_0; tweezercalib; 10.1016/j.cpc.2005.11.007 ADTV_v2_1; tweezercalib; 10.1016/j.cpc.2006.07.009 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.6084/m9.figshare.13515098.v2
title: McMahon AJP Lung 2021 Supplemental Material.pdf

description: Online Supplemental Material containingSupplemental Table S1 and Supplemental Figures S1-S3 for research article: “PAR-2–activated secretion by airway gland serous cells: role for CFTR and inhibition by Pseudomonas aeruginosa” by D. B. McMahon, et. al.<br>
DOI: 10.6084/m9.figshare.6406250.v1
title: Seg_list_of_plasmodium_VSA.csv

description: Table of associations between VSAs derived from orphan_clust.py
DOI: 10.17632/f6sd88t5k7
title: Regulatory arbitrage and loan location decisions by multinational banks

description: This zip file contains Stata do files as well as the necessary data files that reproduce all of the tables and figures in "Regulatory arbitrage and loan location decisions by multinational banks" (Asli Demirgüç-Kunt, Balint Horvath, and Harry Huizinga).
DOI: 10.17632/ny2ymyd3b5
title: Data for: The impact of China’s one belt one road initiative on international trade in the ASEAN region

description: STATA FILES for "The impact of China’s One Belt One Road initiative on international trade in the ASEAN region"
DOI: 10.6084/m9.figshare.12200390.v2
title: Global near-real-time CO2 emission

description: Timely, comprehensive and accurate dataset of CO2 emissions from fossil fuel combustion and cement production are fundamental prerequisites to understanding the global carbon cycle and designing evidenced-based policies for reducing carbon emissions. Here we provided daily CO2 emission data record started from Jan. 1<sup>st</sup> 2019. The dataset uncovered the daily CO2 dynamics through daily, weekly and seasonal variations as well as the change of daily CO2 due to the holiday events and the impact of COVID-19 pandemic.Such near-real-time CO2 dataset would be of great advantage to further monitoring the human activities and to capture the impacts of COVID-19 for long term.<br>
DOI: 10.6084/m9.figshare.26075686.v4
title: CaecilianTraits

description: Functional traits are different among species, which determine the ecological niche a species occupied and the ability of the species to adapt to environment. However, differences in traits also exist at intraspecific level. Such variations shape differences in individual survival capabilities. Investigating the intraspecific differences of functional traits is important for ecology, evolutionary biology and biodiversity conservation. Individual trait-based approaches have been applied in plant ecology. But for animals, most databases only provide data at the species level. In this study, we presented a global database of morphological traits for caecilians (Amphibia, Gymnophiona) at individual-level. Caecilians are a unique group of amphibians characterized by their secretive habits, which also have limited our understanding of this taxon. We compiled the most comprehensive database covering 218 out of 222 known species, with 159 of them have individual-level data. This database will facilitate research in the ecology, evolutionary biology, conservation biology, and taxonomy of caecilians. Furthermore, this dataset can be utilized to test ecological and evolutionary hypotheses at the individual level.
DOI: 10.6084/m9.figshare.29035757.v1
title: Dataset.csv

description: This dataset was collected by the Internet Virtual Consumption Experiment and is used to study the influence of individual consumer preferences and AI information recommendations on the information cocoon and group polarization.
DOI: 10.6084/m9.figshare.5480878.v1
title: Data from Do extra-group fertilizations increase the potential for sexual selection in male mammals?

description: Data for statistical analyses reported in the paper
DOI: 10.6084/m9.figshare.5774226.v1
title: Crime tweets per city and country

description: Number of crime-related tweets collected at city and country level in 18 countries in Latin America during a period of 70 days. Only the number of tweets is published to keep the contents of the tweets and the users confidential.
DOI: 10.6084/m9.figshare.9613865.v1
title: Supplementary Material for: Electroencephalography in Psychiatric Surgery: Past Use and Future Directions

description: The last two decades have seen a re-emergence of surgery for intractable psychiatric disease, in large part due to increased use of deep brain stimulation. The development of more precise, image-guided, less invasive interventions has improved the safety of these procedures, even though the relative merits of modulation at various targets remain under investigation. With an increase in the number and type of interventions for modulating mood/anxiety circuits, the need for biomarkers to guide surgeries and predict treatment response is as critical as ever. Electroencephalography (EEG) has a long history in clinical neurology, cognitive neuroscience, and functional neurosurgery, but has limited prior usage in psychiatric surgery. MEDLINE, Embase, and Psyc-INFO searches on the use of EEG in guiding psychiatric surgery yielded 611 articles, which were screened for relevance and quality. We synthesized three important themes. First, considerable evidence supports EEG as a biomarker for response to various surgical and non-surgical therapies, but large-scale investigations are lacking. Second, intraoperative EEG is likely more valuable than surface EEG for guiding target selection, but comes at the cost of greater invasiveness. Finally, EEG may be a promising tool for objective functional feedback in developing “closed-loop” psychosurgeries, but more systematic investigations are required.
DOI: 10.17632/d6c2m32fdd
title: Gait analyses

description: Recent studies have revealed that the usage of mobile phones while walking has a negative impact on its quality, directly impacting the length of the step and the angle of the foot. This implies that smartphone users have a weaker cycle of walking compared to those who do not use smartphones, and their speed is relatively low because of the impact of texting while walking. Thus these data analyze the impact of smartphone use on walking quality. The experimental method used was designed under three conditions: walking, reading, and texting while walking, with participants required to walk in a 15 meters corridor with no barriers while using their mobile phone in three phases. The experiment was conducted using PODOSMART technology. The data that used from this technology were the length of the walking cycle, cadence, speed and the symmetry of legs.
DOI: 10.17632/gr5vytfdw7
title: Twitter Urdu Discourse Dataset

description: Text dataset for 2 Million tweets in Urdu with user locations
DOI: 10.17632/hs467zj2cw
title: Human genetic variation reveals FCRL3 is a lymphocyte receptor for Yersinia pestis. Keener et al.

description: These data accompany the manuscript "Human genetic variation reveals FCRL3 is a lymphocyte receptor for Yersinia pestis." Yersinia pestis is the bacterium responsible for plague, one of the deadliest diseases in history. To discover human genetic determinants of Y. pestis infection, we utilized nearly a thousand genetically diverse lymphoblastoid cell lines in a cellular genome-wide association study. A nonsynonymous SNP, rs2282284 (N721S), in Fc receptor like 3 (FCRL3) was associated with bacterial invasion of host cells (p=9x10-8). Overexpressed FCRL3 facilitated attachment and invasion of Y. pestis and colocalized with Y. pestis at attachment sites. These properties were variably conserved across the FCRL family, revealing an Ig-like domain and signaling motifs shared by FCRL3 and FCRL5 to be necessary for attachment and invasion. Direct binding to FCRL5 extracellular domain was confirmed, and B cells (the primary cells that express FCRLs) were preferentially invaded by Y. pestis. Thus, Y. pestis hijacks FCRL proteins, possibly taking advantage of an immune receptor to create a lymphocyte niche during infection. 
Summary statistics for the Hi-HOST GWAS of Y. pestis invasion were previously deposited at the Duke Data Repository (https://doi.org/10.7924/r43n2d008).