cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5251fj75
title: MassIVE Reanalysis RMSV000000354.221 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, DIABLO [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5xg9f95z
title: MassIVE Reanalysis RMSV000000354.218 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CFH [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5sq8qh1t
title: MassIVE Reanalysis RMSV000000354.217 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, SLAMF8 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5nz80p7f
title: MassIVE Reanalysis RMSV000000354.219 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GPR137B [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5j678w3m
title: MassIVE Reanalysis RMSV000000354.220 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GLRA3 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5df6k298
title: MassIVE Reanalysis RMSV000000354.222 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, LIN7C [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5517/ccdc.csd.cc26x07d
title: CCDC 2052703: Experimental Crystal Structure Determination

description: Related Article: Kai-Yue Song, Zhen-Cong Yang, Pan-Ke Zhou, Lu-Lu Zong, Hao-Hong Li, Rong Jiang, Zhi-Rong Chen|2022|CrystEngComm|24|1237|doi:10.1039/D1CE01585K
DOI: 10.5517/ccdc.csd.cc26x09g
title: CCDC 2052705: Experimental Crystal Structure Determination

description: Related Article: Kai-Yue Song, Zhen-Cong Yang, Pan-Ke Zhou, Lu-Lu Zong, Hao-Hong Li, Rong Jiang, Zhi-Rong Chen|2022|CrystEngComm|24|1237|doi:10.1039/D1CE01585K
DOI: 10.5517/ccdc.csd.cc26x0bh
title: CCDC 2052706: Experimental Crystal Structure Determination

description: Related Article: Kai-Yue Song, Zhen-Cong Yang, Pan-Ke Zhou, Lu-Lu Zong, Hao-Hong Li, Rong Jiang, Zhi-Rong Chen|2022|CrystEngComm|24|1237|doi:10.1039/D1CE01585K
DOI: 10.5517/ccdc.csd.cc290ksp
title: CCDC 2115712: Experimental Crystal Structure Determination

description: Related Article: Nikita R. Romanenko, Alexey V. Kuzmin, Salavat S. Khasanov, Maxim A. Faraonov, Evgeniya I. Yudanova, Yoshiaki Nakano, Akihiro Otsuka, Hideki Yamochi, Hiroshi Kitagawa, Dmitri V. Konarev|2022|Dalton Trans.|51|2226|doi:10.1039/D1DT04061H
DOI: 10.5517/ccdc.csd.cc290ktq
title: CCDC 2115713: Experimental Crystal Structure Determination

description: Related Article: Nikita R. Romanenko, Alexey V. Kuzmin, Salavat S. Khasanov, Maxim A. Faraonov, Evgeniya I. Yudanova, Yoshiaki Nakano, Akihiro Otsuka, Hideki Yamochi, Hiroshi Kitagawa, Dmitri V. Konarev|2022|Dalton Trans.|51|2226|doi:10.1039/D1DT04061H
DOI: 10.5517/ccdc.csd.cc290kvr
title: CCDC 2115714: Experimental Crystal Structure Determination

description: Related Article: Nikita R. Romanenko, Alexey V. Kuzmin, Salavat S. Khasanov, Maxim A. Faraonov, Evgeniya I. Yudanova, Yoshiaki Nakano, Akihiro Otsuka, Hideki Yamochi, Hiroshi Kitagawa, Dmitri V. Konarev|2022|Dalton Trans.|51|2226|doi:10.1039/D1DT04061H
DOI: 10.5517/ccdc.csd.cc290kws
title: CCDC 2115715: Experimental Crystal Structure Determination

description: Related Article: Nikita R. Romanenko, Alexey V. Kuzmin, Salavat S. Khasanov, Maxim A. Faraonov, Evgeniya I. Yudanova, Yoshiaki Nakano, Akihiro Otsuka, Hideki Yamochi, Hiroshi Kitagawa, Dmitri V. Konarev|2022|Dalton Trans.|51|2226|doi:10.1039/D1DT04061H
DOI: 10.5517/ccdc.csd.cc290kxt
title: CCDC 2115716: Experimental Crystal Structure Determination

description: Related Article: Nikita R. Romanenko, Alexey V. Kuzmin, Salavat S. Khasanov, Maxim A. Faraonov, Evgeniya I. Yudanova, Yoshiaki Nakano, Akihiro Otsuka, Hideki Yamochi, Hiroshi Kitagawa, Dmitri V. Konarev|2022|Dalton Trans.|51|2226|doi:10.1039/D1DT04061H
DOI: 10.5517/ccdc.csd.cc290kyv
title: CCDC 2115717: Experimental Crystal Structure Determination

description: Related Article: Nikita R. Romanenko, Alexey V. Kuzmin, Salavat S. Khasanov, Maxim A. Faraonov, Evgeniya I. Yudanova, Yoshiaki Nakano, Akihiro Otsuka, Hideki Yamochi, Hiroshi Kitagawa, Dmitri V. Konarev|2022|Dalton Trans.|51|2226|doi:10.1039/D1DT04061H
DOI: 10.5517/ccdc.csd.cc29782x
title: CCDC 2122138: Experimental Crystal Structure Determination

description: Related Article: Victoria K. Greenacre, Andrew L. Hector, Ruomeng Huang, William Levason, Vikesh Sethi, Gillian Reid|2022|Dalton Trans.|51|2400|doi:10.1039/D1DT03980F
DOI: 10.5517/ccdc.csd.cc29783y
title: CCDC 2122139: Experimental Crystal Structure Determination

description: Related Article: Victoria K. Greenacre, Andrew L. Hector, Ruomeng Huang, William Levason, Vikesh Sethi, Gillian Reid|2022|Dalton Trans.|51|2400|doi:10.1039/D1DT03980F
DOI: 10.5517/ccdc.csd.cc29784z
title: CCDC 2122140: Experimental Crystal Structure Determination

description: Related Article: Victoria K. Greenacre, Andrew L. Hector, Ruomeng Huang, William Levason, Vikesh Sethi, Gillian Reid|2022|Dalton Trans.|51|2400|doi:10.1039/D1DT03980F
DOI: 10.5517/ccdc.csd.cc297850
title: CCDC 2122141: Experimental Crystal Structure Determination

description: Related Article: Victoria K. Greenacre, Andrew L. Hector, Ruomeng Huang, William Levason, Vikesh Sethi, Gillian Reid|2022|Dalton Trans.|51|2400|doi:10.1039/D1DT03980F
DOI: 10.5517/ccdc.csd.cc297861
title: CCDC 2122142: Experimental Crystal Structure Determination

description: Related Article: Victoria K. Greenacre, Andrew L. Hector, Ruomeng Huang, William Levason, Vikesh Sethi, Gillian Reid|2022|Dalton Trans.|51|2400|doi:10.1039/D1DT03980F
DOI: 10.5517/ccdc.csd.cc297872
title: CCDC 2122143: Experimental Crystal Structure Determination

description: Related Article: Victoria K. Greenacre, Andrew L. Hector, Ruomeng Huang, William Levason, Vikesh Sethi, Gillian Reid|2022|Dalton Trans.|51|2400|doi:10.1039/D1DT03980F
DOI: 10.5517/ccdc.csd.cc297883
title: CCDC 2122144: Experimental Crystal Structure Determination

description: Related Article: Victoria K. Greenacre, Andrew L. Hector, Ruomeng Huang, William Levason, Vikesh Sethi, Gillian Reid|2022|Dalton Trans.|51|2400|doi:10.1039/D1DT03980F
DOI: 10.5517/ccdc.csd.cc29b22t
title: CCDC 2124835: Experimental Crystal Structure Determination

description: Related Article: Jenna K. Buchanan, Tyson N. Dais, Paul G. Plieger|2022|Phys.Chem.Chem.Phys.(PCCP)|24|4407|doi:10.1039/D1CP05514C
DOI: 10.25345/c58p5v854
title: MassIVE Reanalysis RMSV000000354.224 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, VPS4A [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c54x54g2v
title: MassIVE Reanalysis RMSV000000354.223 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, IRAK4 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c51834208
title: MassIVE Reanalysis RMSV000000354.225 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, HAL [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5wh2dd58
title: MassIVE Reanalysis RMSV000000354.229 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, MAP3K14 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5rr1pm14
title: MassIVE Reanalysis RMSV000000354.226 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, DNA2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5n00zs7p
title: MassIVE Reanalysis RMSV000000354.227 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GALNTL5 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5h70803b
title: MassIVE Reanalysis RMSV000000354.228 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, RNF11 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5cf9j591
title: MassIVE Reanalysis RMSV000000354.230 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, PSMC3 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c57p8tc6c
title: MassIVE Reanalysis RMSV000000354.231 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GPBP1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.15151/esrf-es-643215742
title: Danish Biochemistry and Structural Biology BAG

description: This BAG application gathers most danish esrf users with the area of structural biochemistry (including both crystallography, cryoEM and SAXS). 4 PIs work with carbohydrate active enzymes of all classes, with particular focus on biotechnological applications and gut microbiota. 6 PIs work in the important membrane proteins area, with both receptors and transporters as main focus, almost all potential or current drug targets. Other groups (5 PIs) work on non membrane proteins which are also potential drug targets or anyway systems potentially involved in disease - enzymes, bacterial antibiotic resistance and survival, DNA binding proteins and other r egulators, immune system components. One crystallographic method development project is also included (1 PI), as are two bioSAXS projects (2 PIs) regarding fibrillation and formulation. Some PIs in the BAG work of course in several of these main research areas.
DOI: 10.15151/esrf-es-643607380
title: The Israeli BAG

description: The BAG includes numerous principal investigators which are the majority of structural biologists in Israel. The scientific topics are diverse and so different that depicting them in a short Abstract is extremely difficult. In this context BAG members are studying the parameters that govern protein assemblage, structural impacts of signaling processes in different cascades, Thermodynamics of proteolytic reaction. In addition, we have the ribosome project and the design of unique antibiotics with specific functional interactions from the mycinamycins family and their resistance related mechanism compared with other macrolides and the photosystem and how it converts light into energy. The current events promote several Covid-19 related projects but BAG members are and have been involved and virus infection and inhibitory strategies including Hepatitis C virus, arthropod borne viruses (e.g .dengue, West Nile, Zika, Israel Turkey Meningoencephalitis), chikungunya virus and more.
DOI: 10.15151/esrf-es-649494361
title: Macromolecular Crystallography at South-East Andalusia

description: This BAG is a continuation of our previous proposals bringing together three main crystallography groups, UAL, UGR and CSIC. Thse groups agglutinate the crystallography needs of several other teams established through permanent collaborations. It is a continuation of previous BAGs: Mx1406/Mx1541, Mx1629/Mx1739, Mx1830/Mx1938, Mx2064 and Mx 2281(currently running). Our team and collaborators covers a wide range of biotechnological and biomedical topics including: i) the development of ancestral reconstructed enzymes; ii) deciphering the molecular basis for different human pathologies, such as protein miss-folding or protein signalling in innate immunity and inflammation diseases; iii) the determination of the molecular basis governing different biocatalysts of economic significance; iv) the discovery of novel chemotaxis processes exerted by previously unreported bacterial chemoreceptors and v) expansion of protein crystallization and protein crystal-derived methodologies.
DOI: 10.15151/esrf-es-649170553
title: Effects of high hydrostatic pressure on crystallographic structure of xynalase 11 to characterize the conformations of the thumb-loop involv

description: Xylanases in the GH11 family exhibit a jelly-roll fold with the presence of a thumb-loop positioned above the catalytic cleft. This loop is highly mobile with three predicted distinct conformations that should play a major role in the catalytic activity. However, the detailed molecular mechanisms enabling the motion of this loop are largely unknown. Furthermore, the activity of xylanase from the extremophilic species can be enhanced by 20% under hydrostatic pressure. The dynamics in the catalytic cycle is currently characterized using HP-NMR at ambient and different high pressure. The objective of this project consists at precisely analyze the pressure-induced structural modifications using high pressure crystallography. This will allow to interpret the high pressure NMR data in more detail and to characterize the different conformation of the thumb-loop. The knowledge derived from this project should push forward the development of a more efficient enzyme to degrade the biomass.
DOI: 10.15151/esrf-es-691666322
title: IBS BAG

description: The IBS BAG currently includes 24 IBS teams and 4 external groups from CERMAV and iRTSV/CEA (Grenoble), CEA-Cadarache (St Paul lez Durance) and IRBA (Brétigny-sur-Orge). We study structure-function relationships of proteins emphasizing in human health, biotechnology and methodology. Most of the projects can be grouped in different topics as follows: host-pathogen interaction, immunology, new drug targets, fundamental cellular mechanisms, membrane proteins, intrinsically disordered proteins, biotechnological applications and methodology. Some of these projects use integrative approaches (X-ray crystallography, SAXS, NMR (and cryo-EM), together with other biophysical studies) with the aim to fully understand the complexity of the biological macromolecular systems on study. Some other teams are dedicated to serial crystallography and its developments, for which the new ESRF-EBS might be the perfect tool.
DOI: 10.25345/c5416sz4c
title: MassIVE Reanalysis RMSV000000354.239 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, EDA2R [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.34740/kaggle/dsv/3203298
title: Iris Flower
DOI: 10.25345/c50863501
title: MassIVE Reanalysis RMSV000000354.233 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, PDS5A [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.