cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.1ck400f/1
title: Exemplars of unique bowhead whales songs recorded in Fram Strait 2010-11, 2012-13, 2013-14

description: Bowhead whales produce multiple unique songs annually. This dataset provides exemplars of each of 184 unique songs recorded over three winters in Fram Strait. In 2010-2011, 38 songs were identified; in 2012-13, 69 songs were identified and in 2013-14, 76 songs were identified. The zip file contains one exemplar of each song type as an mp3 file. The dates and times these were recorded is in the README.txt file
DOI: 10.5061/dryad.31tc3s8/1
title: Data files
DOI: 10.5061/dryad.504t7/1
title: Materials

description: This zipped archive contains a guide to running the experiment described in this manuscript and all of the digital materials to do so. This includes imitation.py which is a python script to conduct the imitation experiments. This script will prompt the user for some input including whether it should run in singing or whistling mode, and MBEA.py which runs a digital implementation of the montreal battery for evaluating amusia. Two subfolders contain all of the auditory stimuli required by both experiments and these folders should be kept in the same directory as the experiment script. Imitation stimuli are labelled according to a western chromatic scale
DOI: 10.5061/dryad.504t7/2
title: data_archive1

description: This archive contains raw and processed data for every participant. The archive contains a folder for every participant, which in turn contains subfolders with raw recordings for sung imitations. whistled imitations, and perceptual test scores. Recordings are labeled by the stimulus being imitated and saved along with pitch measurements extracted using praat. Praat utility scripts are also provided to semi-automate pitch measurements. xaa is part 1 of 4 data files that can be recombined in Unix with the following command: cat x* &gt; data.zip. In Windows, the data files can be recombined using the following command from a command prompt: copy /b xaa+xab+xac+xad data.zip.
DOI: 10.5061/dryad.504t7/3
title: data_archive2

description: This archive contains raw and processed data for every participant. The archive contains a folder for every participant, which in turn contains subfolders with raw recordings for sung imitations. whistled imitations, and perceptual test scores. Recordings are labeled by the stimulus being imitated and saved along with pitch measurements extracted using praat. Praat utility scripts are also provided to semi-automate pitch measurements. xab is part 2 of 4 data files that can be recombined in Unix with the following command: cat x* &gt; data.zip. In Windows, the data files can be recombined using the following command from a command prompt: copy /b xaa+xab+xac+xad data.zip.
DOI: 10.5061/dryad.504t7/4
title: data_archive3

description: This archive contains raw and processed data for every participant. The archive contains a folder for every participant, which in turn contains subfolders with raw recordings for sung imitations. whistled imitations, and perceptual test scores. Recordings are labelled by the stimulus being imitated and saved along with pitch measurements extracted using praat. Praat utility scripts are also provided to semi-automate pitch measurements. xac is part 3 of 4 data files that can be recombined in Unix with the following command: cat x* &gt; data.zip. In Windows, the data files can be recombined using the following command from a command prompt: copy /b xaa+xab+xac+xad data.zip.
DOI: 10.5061/dryad.504t7/5
title: data_archive4

description: This archive contains raw and processed data for every participant. The archive contains a folder for every participant, which in turn contains subfolders with raw recordings for sung imitations. whistled imitations, and perceptual test scores. Recordings are labeled by the stimulus being imitated and saved along with pitch measurements extracted using praat. Praat utility scripts are also provided to semi-automate pitch measurements. xad is part 4 of 4 data files that can be recombined in Unix with the following command: cat x* &gt; data.zip. In Windows, the data files can be recombined using the following command from a command prompt: copy /b xaa+xab+xac+xad data.zip.
DOI: 10.5061/dryad.7c93n5s/1
title: Read me (data file explanations)
DOI: 10.5061/dryad.7c93n5s/2
title: Epidemic 1 data

description: This data file contains Epidemic 1 information from the serologic study in Hong Kong.
DOI: 10.5061/dryad.7c93n5s/3
title: Epidemic 2 data

description: This data file contains Epidemic 2 information from the serologic study in Hong Kong.
DOI: 10.5061/dryad.7c93n5s/4
title: Epidemic 3 data

description: This data file contains Epidemic 3 information from the serologic study in Hong Kong.
DOI: 10.5061/dryad.7c93n5s/5
title: Epidemic 4 data

description: This data file contains Epidemic 4 information from the serologic study in Hong Kong.
DOI: 10.5061/dryad.7c93n5s/6
title: Influenza proxy data

description: The influenza proxy used in the analysis.
DOI: 10.5061/dryad.821c3j3/6
title: Appendix S6
DOI: 10.5061/dryad.83nj1/13
title: Weekly Zika cases

description: Weekly Zika cases at municipality, department and national levels (in .csv format).
DOI: 10.5061/dryad.83nj1/14
title: Weekly covariates aggregated at municipality level

description: Time series of weekly covariates aggregated at municipality level. This .zip file contains eight tables (in .csv format) of time series for aegypti population, maximum temperature, mean temperature, minimum temperature, NDVI MODIS Aqua, NDIV MODIS Terra, precipitation and relative humidity.
DOI: 10.5061/dryad.83nj1/15
title: Weekly covariates aggregated at department level

description: Time series of weekly covariates aggregated at department level. This .zip file contains eight tables (in .csv format) of time series for aegypti population, maximum temperature, mean temperature, minimum temperature, NDVI MODIS Aqua, NDIV MODIS Terra, precipitation and relative humidity.
DOI: 10.5061/dryad.83nj1/16
title: Weekly covariates aggregated at national level

description: Time series of weekly covariates aggregated at national level. This .zip file contains eight tables (in .csv format) of time series for aegypti population, maximum temperature, mean temperature, minimum temperature, NDVI MODIS Aqua, NDIV MODIS Terra, precipitation and relative humidity.
DOI: 10.5061/dryad.83nj1/17
title: Weekly weighted covariates aggregated at municipality level

description: Time series of weekly covariates, weighted by population, aggregated at municipality level. This .zip file contains eight tables (in .csv format) of time series for aegypti population, maximum temperature, mean temperature, minimum temperature, NDVI MODIS Aqua, NDIV MODIS Terra, precipitation and relative humidity.
DOI: 10.5061/dryad.83nj1/18
title: Weekly weighted covariates aggregated at department level

description: Time series of weekly covariates, weighted by population, aggregated at department level. This .zip file contains eight tables (in .csv format) of time series for aegypti population, maximum temperature, mean temperature, minimum temperature, NDVI MODIS Aqua, NDIV MODIS Terra, precipitation and relative humidity.
DOI: 10.5061/dryad.83nj1/19
title: Weekly weighted covariates aggregated at national level

description: Time series of weekly covariates, weighted by population, aggregated at national level. This .zip file contains eight tables (in .csv format) of time series for aegypti population, maximum temperature, mean temperature, minimum temperature, NDVI MODIS Aqua, NDIV MODIS Terra, precipitation and relative humidity.
DOI: 10.5061/dryad.83nj1/20
title: Fixed time covariates aggregated at all levels

description: Fixed time covariates aggregated at municipality, department and national levels (in .csv format). This .zip file contains three tables (in .csv format), one for each level, with data on population, births, urban population, mean gross cell product and mean travel time.
DOI: 10.5061/dryad.886pr72/1
title: Circum-Arctic mean annual ground temperature rasters

description: These data represent the mean annual ground temperature (MAGT, in °C) forecasts over northern hemisphere land areas (&gt;30°N) presented in the manuscript by Aalto et al., (2018) "Statistical forecasting of current and future circum-Arctic ground temperatures and active layer thickness" published in Geophysical Research Letters. The data has been produced for several time periods and representative concentration pathways (RCP), and they represent the ensemble median of four statistical modelling techniques:
MAGT_Baseline.tif # Forecasted MAGT 2000-2014
MAGT_2050RCP26.tif # 2041-2060 RCP 2.6
MAGT_2050RCP45.tif # 2041-2060 RCP 4.5
MAGT_2050RCP85.tif # 2041-2060 RCP 8.5
MAGT_2070RCP26.tif # 2061-2080 RCP 2.6
MAGT_2070RCP45.tif # 2061-2080 RCP 4.5
MAGT_2070RCP85.tif # 2061-2080 RCP 8.5

Coordinate reference system = WGS84 (epsg:4326), spatial resolution = 30 arc seconds
Contact: juha.aalto@helsinki.fi
DOI: 10.5061/dryad.886pr72/2
title: Circum-Arctic active layer thickness rasters

description: "Circum-Arctic active layer thickness rasters"
These data represent the active layer thickness (ALT, in cm) forecasts over northern hemisphere land areas (&gt;30°N) presented in the manuscript by Aalto et al., (2018) "Statistical forecasting of current and future circum-Arctic ground temperatures and active layer thickness" published in Geophysical Research Letters. The data has been produced for several time periods and representative concentration pathways (RCP), and they represent the ensemble median of four statistical modelling techniques:
ALT_Baseline.tif # Forecasted ALT 2000-2014
ALT_2050RCP26.tif # 2041-2060 RCP 2.6
ALT_2050RCP45.tif # 2041-2060 RCP 4.5
ALT_2050RCP85.tif # 2041-2060 RCP 8.5
ALT_2070RCP26.tif # 2061-2080 RCP 2.6
ALT_2070RCP45.tif # 2061-2080 RCP 4.5
ALT_2070RCP85.tif # 2061-2080 RCP 8.5

Coordinate reference system = WGS84 (epsg:4326), spatial resolution = 30 arc seconds
Contact: juha.aalto@helsinki.fi
DOI: 10.5061/dryad.b3cf6/1
title: COSMO-RS Data

description: All COSMO-RS data from COSMOtherm and COSMOconf is included in the COSMO-RS zip file.
DOI: 10.5061/dryad.b3cf6/2
title: membrane extraction and partition coefficients

description: All data for membrane extraction, mass transfer and partition coefficents are included.
DOI: 10.5061/dryad.m35n6/1
title: Effect of heavy metal contamination on bacterial community structure in paddy fields of South Korea

description: Soils were collected along the vicinity of a copper and gold smelter in Janghang town located in Seocheon County in South Chungcheong Province,South Korea. Soil samples were collected at a depth of 0-30 cm from paddy soils located at three different locations and were named based on their distances from the refinery center. Site 1 was located 260 m from the smelter and contained significantly high levels of arsenic. Site 2 was located 240 m from the smelter and had been designated as part of an initial phytoremediation project.Site 3 consisted of rice paddy soil located 3500 m from the smelter and represented an area of low contamination. Soil sampling was done from three randomly selected areas within each site. Each area represented a replicate sample of a single site, and consisted of top and subsoils from three adjacent spots which were approximately 1 m away from each other.The three subsamples were mixed together to make it one composite sample for each site.Thus S1-1,S1-2 and S1-3 are replicate samples from Site 1,S2-1,S2-2 and S2-3 are replicate samples from Site 2 and S3-1,S3-2 and S3-3 are replicate samples from Site 3.
DOI: 10.5061/dryad.m99v4.1
title: Data from: Next generation lineage discovery: a case study of tuberous Claytonia L.
DOI: 10.5061/dryad.m99v4.1/1.1
title: Data from: Next Generation Lineage Discovery: a Case Study of Tuberous Claytonia L.

description: Compressed zip file including Data, Scripts, Figures, Tables, and Supplemental Appendices
DOI: 10.5061/dryad.m99v4.2/1.2
title: Data from: Next Generation Lineage Discovery: a Case Study of Tuberous Claytonia L.

description: Compressed zip file including Data, Scripts, Figures, Tables, and Supplemental Appendices
DOI: 10.5061/dryad.n13h839/1
title: Piculell etal EM colonization data
DOI: 10.5061/dryad.nr1h6t0/1
title: mtr_gs_track

description: Mean migration traffic rate (MTR), ground speed (GS) and track direction (track) per night during the campaign. Data is divided in “low” 200-800m and “high” 800-1400m altitude groups.
DOI: 10.5061/dryad.pr7kk52/1
title: Workpiece details
DOI: 10.5061/dryad.pr7kk52/2
title: Machine Specifications
DOI: 10.5061/dryad.pr7kk52/3
title: Specifications for Surface Roughness Tester
DOI: 10.5061/dryad.pr7kk52/4
title: Taguchi L32 array for cylindrical grinding
DOI: 10.5061/dryad.pr7kk52/5
title: Taguchi L32 Array for surface grinding
DOI: 10.5061/dryad.qr80jq7/1
title: Naraoia_rev
DOI: 10.5061/dryad.qr80jq7/2
title: Mayers et al-Naraoiid
DOI: 10.5061/dryad.qr80jq7/3
title: Mayers et al Appendix_S1_rev

description: Supp. Data Table 1. Collection description, specimen measurements, morphological matrix used for R and phylogeny matrix.
DOI: 10.5061/dryad.qr80jq7/4
title: Mayers et al (Sup Info)-FIN

description: Supp. Information. List of characters used for the phylogenetic analyses.
DOI: 10.17632/k728mzj68y.1
title: Data for: Clinical Equivalence Assessment of T2 Synthesized Pediatric Brain MRI

description: Raw data of the qualitative assessement of pediatric brain MRI
DOI: 10.5061/dryad.05100/1
title: Supplementary Data
DOI: 10.5061/dryad.0vt7nt0/4
title: Representative sequences for 16S OTUs identified in this study.

description: Sequences with names beginning with "denovo" are less than 97% similar to Greengenes representative sequences at this similarity level. All other sequences are those from Greengenes release 13_8.
DOI: 10.5061/dryad.3kh117d/1
title: M. cavernosa genotypes

description: Datasheet containing Montastraea cavernosa multi-locus genotypes for 9 microsatellite loci (developed by Serrano et al. 2014) assessing population structure across shallow and mesophotic coral banks in the northwest Gulf of Mexico. See readme for column descriptions.
DOI: 10.5061/dryad.3kh117d/2
title: Structure input file

description: Multi-locus genotypes for M. cavernosa from the NW GOM, formatted for Structure input.
DOI: 10.5061/dryad.3kh117d/3
title: Structure parameter file

description: Structure run parameters for use with Structure input file.
DOI: 10.5061/dryad.3kh117d/4
title: Structure output results

description: Archive containing output files for Structure runs (contents of the "Results" directory created by Structure), for use with web-based Structure Harvester (http://taylor0.biology.ucla.edu/structureHarvester/).
DOI: 10.5061/dryad.3kh117d/6
title: Migrate-n Symm parameter file

description: Parameter file for Migrate-n model Symm (symmetrical migration across all populations). Designed for use with Migrate-n-mpi on a high-performance computing cluster.
DOI: 10.5061/dryad.4722kf7/1
title: All Siberian jay CSD presences

description: Presence observations of Siberian jay 2000-2013 (downloaded from https://analysisportal and processed according to Appendix S2.) Spatial reference for x and y coordinates: EPSG 3021.
DOI: 10.5061/dryad.4722kf7/2
title: Siberian jay CSD presences of 38 reporters

description: Presence observations of Siberian jay 2000-2013 from 38 reporters that consistently reported Siberian jay and were able to identify the species by sight and sound (downloaded from https://analysisportal and processed according to Appendix S2 & S3.) MatchYr 2000: Observations in years 2000-2002; MatchYr 2005: Observations in years 2003-2007; MatchYr 2010: Observations in years 2008-2013.
Spatial reference for x and y coordinates: EPSG 3021
DOI: 10.5061/dryad.4722kf7/3
title: Inferred Siberian jay absences

description: MatchYear 2000: Observations in years 2000-2002; MatchYear 2005: Observations in years 2003-2007; MatchYear 2010: Observations in years 2008-2013. Spatial reference for x and y coordinates: EPSG 3021.
DOI: 10.5061/dryad.4b60f/2
title: 2017_SPL meter

description: output from the SPL meter trajectory
DOI: 10.5061/dryad.4b60f/3
title: 2017_meta moth paper

description: re-calculated values for A cell spiking
DOI: 10.5061/dryad.4b60f/4
title: SPL meter trajectory

description: code in C to recalculate the SPL meter
DOI: 10.5061/dryad.5tp46/1
title: Electronic Supplementary Material_Sample SageMath Code

description: Sample SageMath code for modelling the unsteady-state physical absorption of a gas into a large volume of liquid using the generalized Danckwerts (GD) age distribution function. This code was used for performing calculations presented in the manuscript entitled “A surface renewal model for unsteady-state mass transfer using the generalized Danckwerts age distribution function” (authors: I. Hovarth and S. G. Chatterjee), which has been submitted to Royal Society Open Science.
DOI: 10.5061/dryad.6430mr0/1
title: Nest-box occupancy data for flying squirrels

description: Data describes occupancy (1=precence, 0=absence) of flying squirrels in nest boxes. BCODE= name of nest box. ID = a unique combination of box name and census year. Ural owl and goshawk columns describe modelled predation risk from these predators at the nest box site, see article for methods. h1...h27 refer to different land use classes and their combinations as in Table 1 of the research article. _200m and _1km means area (square meters) of that habitat within 200 meters and 1km from nest box, respectively. s (for example h17_200ms) refers to standarized amount of that habitat, see methods.
DOI: 10.5061/dryad.6430mr0/2
title: Nest box occupancy data for red squirrels

description: Data describes nest box occupancy of red squirrels. 1= presence, 0=absence. BCODE= name of the box. ID= unique combination of box name and census year. Goshawk and Ural owl columns describe modelled predation risk from these predators at the nest box site, see methods in research article. h1...h27 refer to land use classes as in Table 1 of the article. _300 and _2500 m refer to the area of each land use class within 300 meters and 2.5 kilometers from the nest box in square meters. Ending 's' (h8_300ms) refers to the standardized area. TimePeriod describes the slightly different detection probability before and since 2006.
DOI: 10.5061/dryad.6430mr0/3
title: Spruce cone crop data

description: Data describes estimates of Norway spruce cone crop (unit: cones per tree, calculated from trees in research forests) in three different areas, Ullava, Oravainen and Maalahti, surrounding the red squirrel study area in Kauhava, Finland.
DOI: 10.5061/dryad.6r19m91/1
title: Supplementary Table 1. Detailed auto-antibodies work-up in patients with irMyositis.
DOI: 10.5061/dryad.739h56c/1
title: Data-set Mate-copying of a costly variant

description: The file contains the data of the experiments presented in the paper. We tested wild type and Curly females for their innate preference for wild type and Curly males and then whether females of both phenotypes copy the choice of their conspecifics for a wild type or Curly male.
DOI: 10.5061/dryad.7c93n5s/10
title: Figure 2 scripts

description: R syntax to reproduce Figure 2.
DOI: 10.5061/dryad.7c93n5s/11
title: Figure 3 scripts

description: R syntax to reproduce Figure 3.
DOI: 10.5061/dryad.7c93n5s/12
title: Figure 4 scripts

description: R syntax to reproduce Figure 4.
DOI: 10.5061/dryad.7c93n5s/13
title: Main text result scripts

description: R syntax to reproduce re-infection results (shown in main text).
DOI: 10.5061/dryad.7c93n5s/7
title: Table 1 scripts

description: R syntax to reproduce results in Table 1.
DOI: 10.5061/dryad.7c93n5s/8
title: Table 2 scripts

description: R syntax to reproduce results in Table 2.
DOI: 10.5061/dryad.7c93n5s/9
title: Figure 1 scripts

description: R syntax to reproduce Figure 1.
DOI: 10.5061/dryad.83nj1/21
title: Spatial time series movies ZIKV cases and environmental drivers.

description: Spatial time series movies ZIKV cases and environmental drivers at weekly time step and municipality level (in .MP4 format).  This file includes nine movies: weekly number of cases, cumulative number of cases,  average NDVI (Aqua), average NDVI (Terra), total precipitation, relative humidity, minimum temperature, mean temperature and maximum temperature.
DOI: 10.5061/dryad.br097sc/1
title: Segmentation_and_Eye_data

description: This sheet contains volumetric data for brains, eye measurements, and other species information used in the analyses.
DOI: 10.5061/dryad.br097sc/2
title: Segmentation Stats

description: CSV data file to be used with the R Markdown file included here.
DOI: 10.5061/dryad.br097sc/3
title: Final_Jan5_update

description: Phylogenetic tree to be used with the R Markdown file included here.
DOI: 10.5061/dryad.br097sc/4
title: fish_OPT

description: R Markdown file used to run analyses and provides data visualization.
DOI: 10.5061/dryad.d437289/1
title: data_Dryad_lopezetal
DOI: 10.5061/dryad.f2d0df0/1
title: Clark, RG combined data for Dryad

description: Descriptions have been added within the data file.
DOI: 10.5061/dryad.j8h41/1
title: Manuscript data and calculations
DOI: 10.5061/dryad.nr1h6t0/2
title: height

description: Mean migration traffic rate (MTR) over two different time periods (entire sampling period: 1 sep-31 oct 2015 and period of MR deployment: 5 – 16 oct 2015) divided into 200 m altitude bins.
DOI: 10.5061/dryad.p6261d6/1
title: CRISPRi_survival_screen_alendronate_K562

description: Statistical information of all genes targeted in a CRISPRi mediated survival screen performed in human K562 cells using an osteoporosis drug, alendronate, as the selection agent. experimental procedures and statistical analyses are described in the manuscript.
DOI: 10.5061/dryad.p6261d6/2
title: CRISPRi_survival_screen_zoledronate_K562

description: statistical information of all genes targeted in a CRISPRi mediated survival screen performed in human K562 cells using an osteoporosis drug, zoledronate, as the selection agent. experimental procedures and statistical analyses are described in the manuscript.
DOI: 10.5061/dryad.vp4q518/1
title: Appendix S3: Additional Tables

description: Additional Table S1 to support the paper.
DOI: 10.5061/dryad.vp4q518/2
title: Appendix S1: Additional details of datasets

description: Additional details of the datasets, and how these were processed prior to analysis. Also contains images of the phylogenies used for interest.
DOI: 10.5061/dryad.vp4q518/3
title: Appendix S2: Additional figures

description: Additional figures to support the paper
DOI: 10.17632/djbbrrnwvx.1
title: Data for: Operating the CabECO ® technology in continuous mode for the direct disinfection of highly fecal-polluted water
DOI: 10.5061/dryad.150r1jf/1
title: ECY17-1266_Autumn10x10km_17jan2018

description: Autumnal fruiting fungi data: 10 x 10 km grid resolution of species fruiting days (ordinal day; mean, 2.5 & 97.5 percentiles plus sample sizes) aggregated across 1970-2010. Associated bioclimatic meta-data for each grid are included as well. This dataset comprises fungal taxa fruiting in autumn.
DOI: 10.5061/dryad.150r1jf/2
title: ECY17-1266_Spring10x10km_17jan2018

description: Spring fruiting fungi data: 10 x 10 km grid resolution of species fruiting days (ordinal day; mean, 2.5 & 97.5 percentiles plus sample sizes) aggregated across 1970-2010. Associated bioclimatic meta-data for each grid are included as well. This dataset comprises fungal taxa fruiting in spring.
DOI: 10.5061/dryad.150r1jf/3
title: ECY17-1266_AutumnEcto10x10km_17jan2018

description: Autumnal ectomycorrhizal fruiting fungi data: 10 x 10 km grid resolution of species fruiting days (ordinal day; mean, 2.5 & 97.5 percentiles plus sample sizes) aggregated across 1970-2010. Associated bioclimatic meta-data for each grid are included as well. This dataset comprises ectomycorrhizal fungal taxa fruiting in autumn.