cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7439168
title: Chalgrove Lake (Buffalo Creek Watershed) Date from 2022-05-20 to 2022-06-28

description: General Metadata for Chalgrove Lake YSI Data Files Specific metadata for each deployment can be found as text files with the file format of: <pre><code>BC_chalgrove_lake_YYYY-MM-DD_YYYY-MM-DD_metadata.txt</code></pre> Where YYYY-MM-DD_YYYY-MM-DD is the date range of the deployment. File Created 2019-04-12 by KF File Modified 2019-10-31 by KF - added the descriptions of the total algae variables 2022-05-04 by KF - updated to match LEO standards and current deployment specs 2022-05-23 by KF - updated to include Total Algae Sensor information Description These data are from a YSI EXO2 multiparameter sonde deployed at approximatly 0.7 m in Chalgrove Lake (37.242983 N, -78.464116 W) in approximately 4 m of water. Sonde Specifics The specific sensors and SNs deployed are on the metadata specific to each deployment but generally the sonde has: Temperature Conductivity pH ODO Turbidity Total Algae Measurement Parameters, units, and Variable Names date.time = the combined date and time of the measurement (YYYY-MM-DD HH:MM:SS) date = the sampling date reported by the YSI (M/D/YYYY) time = the sampling time reported by the YSI (HH:MM:SS) frac_sec = the sampling fractions of a second reported by the YSI site_name = the site name on the YSI deployment (left blank) Cond = the conductivity (uS/cm) Chl_RFU = the raw fluorescence of the chlorophyll sensor (RFU) nLF_Cond = the nLF conductivity (uS/cm) DO_perc = the percent oxygen saturation DO_percL = the percent local oxygen saturation DO_mgL = the dissolved oxygen concentration (mg/L) SAL = the salinity (psu) SPC = the specific conductivity (uS/cm) TAL_PC_RFU = the raw fluorescence of the phycocyanin (blue green algae) sensor (RFU) TDS = the total dissolved solids (mg/L) Turbidity = the turbidity of the water (FNU) TSS = the total suspended solids pH = the pH pH_mV = the millivolts of the pH sensor Temp = the temperature (dC) Batt_V = the battery voltage Cable_V = the cable power
DOI: 10.5281/zenodo.7439167
title: Chalgrove Lake (Buffalo Creek Watershed) Date from 2022-05-20 to 2022-06-28

description: General Metadata for Chalgrove Lake YSI Data Files Specific metadata for each deployment can be found as text files with the file format of: <pre><code>BC_chalgrove_lake_YYYY-MM-DD_YYYY-MM-DD_metadata.txt</code></pre> Where YYYY-MM-DD_YYYY-MM-DD is the date range of the deployment. File Created 2019-04-12 by KF File Modified 2019-10-31 by KF - added the descriptions of the total algae variables 2022-05-04 by KF - updated to match LEO standards and current deployment specs 2022-05-23 by KF - updated to include Total Algae Sensor information Description These data are from a YSI EXO2 multiparameter sonde deployed at approximatly 0.7 m in Chalgrove Lake (37.242983 N, -78.464116 W) in approximately 4 m of water. Sonde Specifics The specific sensors and SNs deployed are on the metadata specific to each deployment but generally the sonde has: Temperature Conductivity pH ODO Turbidity Total Algae Measurement Parameters, units, and Variable Names date.time = the combined date and time of the measurement (YYYY-MM-DD HH:MM:SS) date = the sampling date reported by the YSI (M/D/YYYY) time = the sampling time reported by the YSI (HH:MM:SS) frac_sec = the sampling fractions of a second reported by the YSI site_name = the site name on the YSI deployment (left blank) Cond = the conductivity (uS/cm) Chl_RFU = the raw fluorescence of the chlorophyll sensor (RFU) nLF_Cond = the nLF conductivity (uS/cm) DO_perc = the percent oxygen saturation DO_percL = the percent local oxygen saturation DO_mgL = the dissolved oxygen concentration (mg/L) SAL = the salinity (psu) SPC = the specific conductivity (uS/cm) TAL_PC_RFU = the raw fluorescence of the phycocyanin (blue green algae) sensor (RFU) TDS = the total dissolved solids (mg/L) Turbidity = the turbidity of the water (FNU) TSS = the total suspended solids pH = the pH pH_mV = the millivolts of the pH sensor Temp = the temperature (dC) Batt_V = the battery voltage Cable_V = the cable power
DOI: 10.6084/m9.figshare.3761562.v2425
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5281/zenodo.7431677
title: Data of Survey on National Contributions to EOSC 2021

description: This is the data set from the EOSC Steering Board pilot survey on National Contributions to EOSC 2021 The annual survey on National Contributions to EOSC monitors policies, practices, and impacts related to EOSC and Open Science at national and institutional levels in Europe The pilot survey for 2021 was published and the data was collected and is now available in the online dashboard of the EOSC Observatory: [https://eoscobservatory.eosc-portal.eu] This data set has removed confidential information on financial estimations in questions 4-14 and also descriptions of use cases in question 19 which will be presented in an EOSC Catalogue of Best Practices
DOI: 10.5281/zenodo.7439177
title: Chalgrove Lake (Buffalo Creek Watershed) Data from 2022-06-28 to 2022-08-05

description: General Metadata for Chalgrove Lake YSI Data Files Specific metadata for each deployment can be found as text files with the file format of: <pre><code>BC_chalgrove_lake_YYYY-MM-DD_YYYY-MM-DD_metadata.txt</code></pre> Where YYYY-MM-DD_YYYY-MM-DD is the date range of the deployment. File Created 2019-04-12 by KF File Modified 2019-10-31 by KF - added the descriptions of the total algae variables 2022-05-04 by KF - updated to match LEO standards and current deployment specs 2022-05-23 by KF - updated to include Total Algae Sensor information Description These data are from a YSI EXO2 multiparameter sonde deployed at approximatly 0.7 m in Chalgrove Lake (37.242983 N, -78.464116 W) in approximately 4 m of water. Sonde Specifics The specific sensors and SNs deployed are on the metadata specific to each deployment but generally the sonde has: Temperature Conductivity pH ODO Turbidity Total Algae Measurement Parameters, units, and Variable Names date.time = the combined date and time of the measurement (YYYY-MM-DD HH:MM:SS) date = the sampling date reported by the YSI (M/D/YYYY) time = the sampling time reported by the YSI (HH:MM:SS) frac_sec = the sampling fractions of a second reported by the YSI site_name = the site name on the YSI deployment (left blank) Cond = the conductivity (uS/cm) Chl_RFU = the raw fluorescence of the chlorophyll sensor (RFU) nLF_Cond = the nLF conductivity (uS/cm) DO_perc = the percent oxygen saturation DO_percL = the percent local oxygen saturation DO_mgL = the dissolved oxygen concentration (mg/L) SAL = the salinity (psu) SPC = the specific conductivity (uS/cm) TAL_PC_RFU = the raw fluorescence of the phycocyanin (blue green algae) sensor (RFU) TDS = the total dissolved solids (mg/L) Turbidity = the turbidity of the water (FNU) TSS = the total suspended solids pH = the pH pH_mV = the millivolts of the pH sensor Temp = the temperature (dC) Batt_V = the battery voltage Cable_V = the cable power
DOI: 10.5281/zenodo.7439176
title: Chalgrove Lake (Buffalo Creek Watershed) Data from 2022-06-28 to 2022-08-05

description: General Metadata for Chalgrove Lake YSI Data Files Specific metadata for each deployment can be found as text files with the file format of: <pre><code>BC_chalgrove_lake_YYYY-MM-DD_YYYY-MM-DD_metadata.txt</code></pre> Where YYYY-MM-DD_YYYY-MM-DD is the date range of the deployment. File Created 2019-04-12 by KF File Modified 2019-10-31 by KF - added the descriptions of the total algae variables 2022-05-04 by KF - updated to match LEO standards and current deployment specs 2022-05-23 by KF - updated to include Total Algae Sensor information Description These data are from a YSI EXO2 multiparameter sonde deployed at approximatly 0.7 m in Chalgrove Lake (37.242983 N, -78.464116 W) in approximately 4 m of water. Sonde Specifics The specific sensors and SNs deployed are on the metadata specific to each deployment but generally the sonde has: Temperature Conductivity pH ODO Turbidity Total Algae Measurement Parameters, units, and Variable Names date.time = the combined date and time of the measurement (YYYY-MM-DD HH:MM:SS) date = the sampling date reported by the YSI (M/D/YYYY) time = the sampling time reported by the YSI (HH:MM:SS) frac_sec = the sampling fractions of a second reported by the YSI site_name = the site name on the YSI deployment (left blank) Cond = the conductivity (uS/cm) Chl_RFU = the raw fluorescence of the chlorophyll sensor (RFU) nLF_Cond = the nLF conductivity (uS/cm) DO_perc = the percent oxygen saturation DO_percL = the percent local oxygen saturation DO_mgL = the dissolved oxygen concentration (mg/L) SAL = the salinity (psu) SPC = the specific conductivity (uS/cm) TAL_PC_RFU = the raw fluorescence of the phycocyanin (blue green algae) sensor (RFU) TDS = the total dissolved solids (mg/L) Turbidity = the turbidity of the water (FNU) TSS = the total suspended solids pH = the pH pH_mV = the millivolts of the pH sensor Temp = the temperature (dC) Batt_V = the battery voltage Cable_V = the cable power
DOI: 10.5281/zenodo.7108991
title: Master database for publication "Stakeholder engagement and knowledge co-production for better watershed management with the Freshwater Health Index"

description: The spreadsheet is the master database used for the research with the title of "Stakeholder engagement and knowledge co-production for better watershed management with the Freshwater Health Index" to be published on <em>Current Research in Environmental Sustainability</em> in late 2022. The data include narratives for six principles on stakeholder engagement and knowledge co-production. These principles were derived by combining Talley et al’s five principles for effective stakeholder engagement (Talley et al. 2016) with Norström et al’s four principles for knowledge co-production (Norström et al. 2020). The six principles were aligned with the components of the freshwater health index (FHI) framework. Project leaders from nine FHI case studies completed a text table based on the description of the six principles and their FHI factors. This process generated the present master qualitative database with narrative responses. The socio-ecological context for each case study is provided for contextualization.
DOI: 10.5281/zenodo.7108992
title: Master database for publication "Stakeholder engagement and knowledge co-production for better watershed management with the Freshwater Health Index"

description: The spreadsheet is the master database used for the research with the title of "Stakeholder engagement and knowledge co-production for better watershed management with the Freshwater Health Index" to be published on <em>Current Research in Environmental Sustainability</em> in late 2022. The data include narratives for six principles on stakeholder engagement and knowledge co-production. These principles were derived by combining Talley et al’s five principles for effective stakeholder engagement (Talley et al. 2016) with Norström et al’s four principles for knowledge co-production (Norström et al. 2020). The six principles were aligned with the components of the freshwater health index (FHI) framework. Project leaders from nine FHI case studies completed a text table based on the description of the six principles and their FHI factors. This process generated the present master qualitative database with narrative responses. The socio-ecological context for each case study is provided for contextualization.
DOI: 10.5281/zenodo.7439186
title: Master database for publication "Stakeholder engagement and knowledge co-production for better watershed management with the Freshwater Health Index"

description: The spreadsheet is the master database used for the research with the title of "Stakeholder engagement and knowledge co-production for better watershed management with the Freshwater Health Index" to be published on <em>Current Research in Environmental Sustainability</em> in late 2022. The data include narratives for six principles on stakeholder engagement and knowledge co-production. These principles were derived by combining Talley et al’s five principles for effective stakeholder engagement (Talley et al. 2016) with Norström et al’s four principles for knowledge co-production (Norström et al. 2020). The six principles were aligned with the components of the freshwater health index (FHI) framework. Project leaders from nine FHI case studies completed a text table based on the description of the six principles and their FHI factors. This process generated the present master qualitative database with narrative responses. The socio-ecological context for each case study is provided for contextualization.
DOI: 10.5281/zenodo.7437797
title: Microscopy data (3/3): interaction of the gene foxd5 with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>foxd5</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at these addresses: https://doi.org/10.5281/zenodo.7437783 https://doi.org/10.5281/zenodo.7437795
DOI: 10.5281/zenodo.7437796
title: Microscopy data (3/3): interaction of the gene foxd5 with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>foxd5</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at these addresses: https://doi.org/10.5281/zenodo.7437783 https://doi.org/10.5281/zenodo.7437795
DOI: 10.5281/zenodo.7437783
title: Microscopy data (1/3): interaction of the gene foxd5 with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>foxd5</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at this address: https://doi.org/10.5281/zenodo.7437795 https://doi.org/10.5281/zenodo.7437797
DOI: 10.5281/zenodo.7437782
title: Microscopy data (1/3): interaction of the gene foxd5 with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>foxd5</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at this address: https://doi.org/10.5281/zenodo.7437795 https://doi.org/10.5281/zenodo.7437797
DOI: 10.5281/zenodo.7437795
title: Microscopy data (2/3): interaction of the gene foxd5 with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>foxd5</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at these addresses: https://doi.org/10.5281/zenodo.7437783 https://doi.org/10.5281/zenodo.7437797
DOI: 10.5281/zenodo.7437794
title: Microscopy data (2/3): interaction of the gene foxd5 with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>foxd5</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at these addresses: https://doi.org/10.5281/zenodo.7437783 https://doi.org/10.5281/zenodo.7437797
DOI: 10.5281/zenodo.7439196
title: Campus Pond (Buffalo Creek Watershed) Data from 2022-06-13 to 2022-07-08

description: General Metadata for Campus Pond Sampling Station Files Specific metadata for each deployment and sensor can be found as text files with the file format of: <pre><code>BC_CampusPond_YYYY-MM-DD_YYYY-MM-DD_metadata.txt</code></pre> Where YYYY-MM-DD_YYYY-MM-DD is the date range of the sampling period. NOTE: The metadata in the above file is collected from the data logger and does not have all of fields present in the final data set, because some were created during data cleaning. Details on how the data were cleaned and variables created can be found at in the cleaning scripts on Gitlab https://gitlab.com/leo147/leo/-/tree/master/lab_notebook/data_processing/cleaning_scripts. File Created 2021-11-10 by KF - copied and modified from HS_wetland_general_metadata.md File Modified Description These data are from the sampling station in Campus Pond on the Longwood University Campus. The sensors are along the S shoreline of the pond (37.296813, -78.397702). All data are CC-BY and should be cited using the DOI available at https://zenodo.org/communities/leo/ Station Specifics The specific sensors at the site are: <pre><code>* Water Temperature (dC) and Dissolved Oxygen (mg/l) are collected with a Onset HOBO U26-001 Dissolved Oxygen Logger * Water Temperature (dC) and Water Pressure (mmHg) are collected with an Onset HOBO U20-001-01 Water Level Logger * Water Temperature (dC) and Conductivity are collected with an Onset HOBO U24-001 Conductivity Logger * Air Temperature (dC) and Barometric Pressure (mmHg) are collected with an Onset HOBO U20-001-01 Water Level Logger mounted in the air next to the wetland.</code></pre> The sensors are sampled every 15 minutes Measurement Parameters, units, and Variable Names <pre><code>* date.time - the date and time that the record was collected, reported in POSIX standard time (YYYY-MM-DD HH:MM:SS) * observation.DO, .CT, .press, or .BP - the incremental number of each observation from the DO, conductivity, water pressure, or barometric pressure sensor. * timestamp.DO, .CT, .press, or .BP - the data and time that the record was collected, as reported by the data logger (MM/DD/YY HH:MM:SS A/PM) from the DO, conductivity, water pressure, or barometric pressure sensor. * DO - the concentration of dissolved oxygen in the water (mg/L) * Temp.DO, .CT - the temperature (dC) from the DO or conductivity. * WaterTemp - the water temperature measured from the pressure transducer in the water (dC). * AirTemp - the air temperature measured from the pressure transducer (BP sensor) in the air (dC). * Pressure.press or .BP - the pressure recorded by the pressure transducer (kPa) on the water pressure or barometric pressure sensor. * Z - the depth of the water (cm). * Low_Range_CT - the conductivity read from 0 - 2500 uS/cm (uS/cm) * Full_Range_CT - the conductivity read from 0 - 15000 uS/cm (mmHg) * press.g.cm2 - the pressure from the water pressure sensor (g/cm^2) * BP.g.cm2 - the barometric pressure from the barometric pressure sensor (g/cm^2)</code></pre>