cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29042009.v1
title: VisualSystemLesions.png

description: <b>Visual System Lesions: An Illustrated Overview</b>This illustration maps the anatomy of the afferent visual pathway and the types of visual field defects that can arise from lesions at various points along this route—from the retina to the occipital cortex. Because visual information travels across the entire axial length of the brain, both ophthalmic and neurological conditions can significantly affect visual function. Understanding these anatomical landmarks helps clinicians and researchers localize lesions and better interpret visual disturbances.<b>Understanding the Visual Pathway</b><br>The visual pathway begins at the retina and follows a three-neuron relay system to the occipital cortex. Light signals are first processed by bipolar cells (first-order neurons), which then synapse with retinal ganglion cells (second-order neurons). These ganglion cell axons form the optic nerves, which meet at the optic chiasm. Here, nasal retinal fibers (representing the temporal visual fields) cross to the opposite side, while temporal retinal fibers (nasal visual fields) stay on the same side. These fibers continue as the optic tracts and synapse at the lateral geniculate body of the thalamus. From there, third-order neurons project to the visual cortex via two main pathways: Baum’s loop (superior optic radiations) and Meyer’s loop (inferior optic radiations).<b>Dividing the Pathway for Diagnostic Clarity</b><br>To simplify diagnosis and understanding, the visual pathway can be divided into three major regions:<b>Optic Nerve</b>: Lesions here often lead to vision dimming or color desaturation and are usually unilateral. A relative afferent pupillary defect (RAPD) is a hallmark sign. Causes include optic neuritis, ischemia, trauma, or infiltrative conditions.<b>Optic Chiasm</b>: Lesions at the chiasm commonly cause bitemporal hemianopia due to disruption of decussating nasal fibers. Pituitary tumors are a frequent cause, but inflammation or infiltration may also be responsible.<b>Retrochiasmal Pathway</b>: Lesions posterior to the chiasm, including those affecting the optic tract, radiations, or occipital cortex, often result in homonymous visual field loss. The location of the lesion determines the symmetry and completeness of the visual defect.<b>Clinical Relevance</b><br>Accurately localizing visual pathway lesions is essential in clinical practice, guiding diagnostic imaging and treatment. This illustration offers a visual summary of how different lesion sites correlate with specific patterns of visual field loss, aiding in both teaching and clinical reference.
DOI: 10.6084/m9.figshare.c.3665833_d6.v1
title: Additional file 3: of Genome-wide association analysis of seedling traits in diverse Sorghum germplasm under thermal stress

description: Validation of SNPs in nine sorghum lines to determine the haplotypes for cold tolerance. (XLSX 10Â kb)
DOI: 10.15468/dl.ya582g
title: Occurrence Download

description: A dataset containing 150 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Plantago rhodosperma Decne.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 150 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013207-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/43vrcwvdf8
title: U-HEAT (Urban Heat Experiment Around Lubbock, Texas) Datasets

description: These are HOBO data collected within a 2-year long NOAA-funded project. Urban Heat Experiment Around Lubbock, Texas (U-HEAT): The U_HEAT testbed includes 23 sites in Lubbock. The file headers should provided all the information. The site locations are given in the data folder as well. 

Please go through the site map, site locations and other meta data files before you use these data for research. 

U-HEAT Testbed features

Low-cost, low maintenance, easily accessible, remote data collection (Bluetooth)
2 m above ground level; Grassy surface and robust mounting
Community involvement allowing uninterrupted measurements for more than 2 years period
Data sets: 1 minute temporal resolution for stationary sites which makes 22 days continuous data collection.
DOI: 10.17632/f3zx6b9vwp
title: Pasuquin Carbonate Boulders

description: This dataset contains the location, morphometry measurements, minimum flow velocity, and minimum wave height of the carbonate boulders in Barangay Davila and Dilavo, in Pasuquin Municipality, Ilocos Norte Province, Philippines. One of the objectives of the research is to characterize the extreme wave event (EWE) (tsunami or storm surge) that deposited the boulders by measuring the boulder morphometry, spatial distribution, and employing hydrodynamic modeling (Nandasena et al., 2022; Pignatelli et al., 2009; Shah-hosseini et al., 2011). The hydrodynamic model calculates the minimum flow velocity (MFV) and minimum wave height (MWH) of the extreme wave event that could initiate boulder movement.

The boulder morphometry includes the boulder axes (long, intermediate, and short), mass, volume, density, and shape. The spatial distribution partly includes the boulder orientation and distance from shore. The data required by the hydrodynamic model are: the boulder axes measurements, boulder volume, seawater volume, gravitational acceleration, coefficient of virtual lift (Nandasena et al., 2022), coefficient of virtual drag (Imamura et al., 2008), coefficient of friction (Nandasena et al., 2011), coefficient of virtual volume, and slope of platform. Boulder axes, boulder volume, and platform slope were measured in the field. The coefficient of virtual volume was calculated using the boulder measurements. The other coefficients were determined from literature.

The MFV has two scenarios based on the boulder pre-transport setting: the subaerial/submerged scenario (SS) and the joint-bounded scenario (JBS). The SS has three transport mechanisms: sliding, rolling, lifting. The transport mechanism of JBS is lifting only. The MFVs were also calculated using a range of values for the coefficient of lift to demonstrate how the wave type (e.g. supercritical, subcritical, critical) of the EWE may have affected the boulder deposition.

The MWH has two scenarios based on the wave type parameter (δ): δ = 4 (Pignatelli et al., 2009) and δ = 1 (Shah-hosseini et al., 2011). Similar to the MFVs, the MWHs were also calculated using a range of values for the coefficient of lift to demonstrate how the wave type (e.g. supercritical, subcritical, critical) of the EWE may have affected the boulder deposition.

The findings show that: 1) Increasing the coefficient of lift results in a lower MFV and MWH. 2) Sliding and rolling have similar MFVs in Pasuquin, indicating that the primary transport mechanism of the boulders are rolling or lifting. 3) The measurements in Pasuquin are comparable to the global occurrences of boulders.
DOI: 10.6084/m9.figshare.19222509.v1
title: Functional traits and abundances of mangrove fish communities at Caribbean and Pacific coast of Panama

description: The data set is asscociated to Stuthmann et al. - The functional ecology of mangrove fishes across the Isthmus of Panama - in Diversity and Distributions<br>
DOI: 10.6084/m9.figshare.22774721.v1
title: The CCD and LTO emissions of each route and airline from the international routes in Africa in 2021

description: The CCD and LTO emissions of each route and airline from the international routes in Africa in 2021
DOI: 10.6084/m9.figshare.5120971.v1
title: Supplementary Material for: Novel Method to Process Cystic Fibrosis Sputum for Determination of Oxidative State

description: <i>Background:</i> Induced sputum is the most commonly used method to analyze airway inflammation in cystic fibrosis (CF) patients ex vivo. Due to the complex matrix of the sample material, precise and reliable analysis of sputum constituents depends critically on preanalytical issues. <i>Objectives:</i> Here we compared the commonly used method for sputum processing by dithiothreitol (DTT) with a novel mechanical method in regard to basal cellular parameters, neutrophil markers and glutathione (GSH) levels. <i>Methods:</i> Sputum samples from CF patients were processed in parallel with or without the use of DTT. The key improvement of the mechanical method was the processing in many very small aliquots. Cellular and humoral markers were assessed and compared according to Bland-Altman. <i>Results:</i> Total cell count, cell viability, differential cell count, neutrophil elastase levels and flow cytometrically analyzed neutrophil markers (CD63, CD11b, DHR) did not differ between the two methods. Intracellular and extracellular GSH levels were significantly higher in DTT-treated samples (p = 0.002). <i>Conclusion:</i> The mechanical sputum-processing method presented had a similar yield of cells and fluids as the conventional DTT method and the advantage of omitting the introduction of reducing agents. This method allows a more reliable analysis of redox-dependent airway inflammation in sputum cells and fluid from CF patients than methods utilizing DTT.
DOI: 10.6084/m9.figshare.7205903.v1
title: DeceiverAndReceiverDataSet

description: This zip file contains the data and codebook used for the manuscript:<br>"It’s the deceiver and the receiver: individual differences in phishing susceptibility and false positives with item profiling"
DOI: 10.6084/m9.figshare.12834308.v1
title: Supplementary Material for: Heavy Drinking Habits Are Associated with Worse In-Hospital Outcomes in Patients with Acute Coronary Syndrome: An Insight from the AMIS Plus Registry

description: <b><i>Background:</i></b> The association between alcohol consumption and the occurrence of coronary heart disease is well described in the literature, while data regarding the impact of regular alcohol consumption on in-hospital outcomes in the setting of acute coronary syndrome (ACS) are lacking. We aimed to evaluate the impact of self-reported alcohol consumption on in-hospital outcomes in patients with ACS. <b><i>Methods:</i></b> Data derived from patients enrolled between 2007 and 2019 in the Acute Myocardial Infarction in Switzerland (AMIS) Plus registry were retrospectively analyzed. Patients were stratified based on alcohol drinking pattern. Primary outcome was all-cause in-hospital mortality, while secondary outcomes were set as incidence of major adverse cardiac and cerebrovascular events (MACCEs). Outcome comparisons according to quantity of daily alcohol intake were also performed. <b><i>Results:</i></b> Records concerning alcohol consumption were available in 25,707 patients; 5,298 of them (21%) fulfilled the criteria of regular alcohol consumption. Regular drinkers were predominantly male, younger, smokers, more comorbid and with a worse clinical presentation as compared with abstainers/occasional drinkers. Daily alcohol intake was reported in 4,059 (77%) of these patients (regular drinkers). Among them, 2,640 were light drinkers (≤2 drinks/day) and 1,419 heavy drinkers (&gt;2 drinks/day). In-hospital mortality and MACCEs of heavy drinkers were significantly higher compared with those of light drinkers (5.4 vs. 3.3% and 7.0 vs. 4.4%, both <i>p</i> = 0.001). When tested together with Global Registry of Acute Coronary Events risk score parameters, heavy alcohol consumption was independently associated with in-hospital mortality (<i>p</i> = 0.004). <b><i>Conclusions:</i></b> Our results support that heavy alcohol consumption is an independent predictor of in-hospital mortality in patients presenting with ACS.
DOI: 10.6084/m9.figshare.24316951.v1
title: Wu_S1P

description: Raw data for the manuscript "<b>Gut-Brain Sphingolipid Signaling Mediates Aversive Associative Memory in </b><b><i>C. elegans</i></b>"
DOI: 10.6084/m9.figshare.27300834.v1
title: <b>High-Purity Carbon Monoxide Production via Photothermal Formic Acid Decomposition over Fluorite ZrO</b><sub><strong>2</strong></sub>

description: Obtaining high-purity CO requires energy-intensive purification processes. Here metastable fluorite ZrO2 is prepared that can catalyse thermal and photothermal formic acid dehydration to CO while completely shutting off the impurity-generating dehydrogenation pathway.
DOI: 10.6084/m9.figshare.28502054.v1
title: TSS annotation files

description: TSS annotation files
DOI: 10.6084/m9.figshare.5777646.v1
title: Affordances for Drinking Alcohol: A Non-Participant Observation Study in Licensed Premises

description: This folder contains the research data related to the publication: Hill, Pilling & Foxcroft, Affordances for Drinking Alcohol A Non-Participant Observation Study in Licensed Premises.<br><br>This includes confirmation of ethical approval; observational reports; observational data and the analysis; as well as the visual maps.<br><br>This data and research materials are anonymised, but include in-depth, qualitative and sensitive information, including the identification and illustration of specific properties of alcogenic environments. This is why the data and related materials will not be publicly accessible.<br><br><br>
DOI: 10.17632/sd3rjb2b6z
title: Profile Permohonan dan Agihan Zakat Oktober 2021

description: Profile permohonan zakat sara diri Universiti Teknologi MARA (UiTM) Cawangan Perlis Oktober 2021
DOI: 10.21942/uva.6850451.v1
title: Transitivity prominence in Russian Sign Language based on corpus data

description: These are two data files and one R script used in the analysis of transitivity of verbs in the corpus of Russian Sign Language, reported in the following paper: <br>Kimmelman, V. (2016). Transitivity in RSL: a corpus-based account. In E. Efthimiou, S-E. Fotinea, T. Hanke, J. Hochgesang, J. Kristoffersen, & J. Mesch (Eds.), <i>Proceedings of the 7th Workshop on the representation and processing of Sign Languages: Corpus Mining</i> (pp. 117-120). ELRA.<br><br>Please read the paper for all the details following the link below (the link is to the whole proceedings volume).
DOI: 10.6084/m9.figshare.14374067.v1
title: Data from: The first detection of an earthquake from a balloon using its acoustic signature

description: This page contains data used in the analysis for the paper titled "The first detection of an earthquake from a balloon using its acoustic signature" in Geophysical Research Letters. This paper performs a data and model-based seismo-acoustic analysis to show the detection of Rayleigh waves generated by a magnitude 4.2 earthquake in July 2019 on a balloon platform at an altitude of 4.8 km. <br><br>The dataset provided here contains raw data recorded on five balloon-based barometers. The "Hare" and "Tortoise" CSV files contain time-stamped absolute pressure in bar ("_Baro" suffix) and location data ("_GPS" suffix) for two balloons launched on July 22, 2019 and the "Hare2" and "CrazyCat" CSV files contain the same data for two balloons launched on August 9, 2019. CrazyCat has two files pressure data, one for the lower and one for the upper package, as indicated. Location is provided for only the upper package on CrazyCat. The lower package was vertically 36 meters below. Timestamps are in GPS seconds of the day (i.e. time in seconds UTC since 0000 UTC on the day).<br><br>In addition we provide data generated by two simulation tools used in the work - SPECFEM-2D-DG and RW-Atmos. These data are contained in a netCDF file titled "modelData.nc". Measurement stations and source specifications are described in the attributes.<br>Seismometer data used in this work were downloaded from publicly available data at the Southern California Earthquake Data Center (SCEDC) (doi:10.7909/C3WD3xH1) : https://service.scedc.caltech.edu/<br>
DOI: 10.6084/m9.figshare.19783498.v1
title: A comprehensive genomic and transcriptomic dataset of triple-negative breast cancers

description: Molecular subtyping of triple-negative breast cancer (TNBC) is essential for understanding the mechanisms and discovering actionable targets of this highly heterogeneous type of breast cancer. We previously performed a large single-center and multiomics study consisting of genomics, transcriptomics, and clinical information from 465 patients with primary TNBC. To facilitate reusing this unique dataset, we provided a detailed description of the dataset with special attention to data quality in this study. The multiomics data were generally of high quality, but a few sequencing data had quality issues and should be noted in subsequent data reuse. Furthermore, we reconduct data analyses with updated pipelines and the updated version of the human reference genome from hg19 to hg38. The updated profiles were in good concordance with those previously published in terms of gene quantification, variant calling, and copy number alteration. Additionally, we developed a user-friendly web-based database for convenient access and interactive exploration of the dataset. Our work will facilitate reusing the dataset, maximize the values of data and further accelerate cancer research.
DOI: 10.6084/m9.figshare.22004144.v1
title: Table S1;Table S2;Table S3;FRUITS Model(2)_Glx-Phe from Stable isotope analyses of amino acids reveal the importance of aquatic resources to Mediterranean coastal hunter–gatherers

description: El Collado and Cueva de Nerja Data;Data used for comparison;Parameters used for the FRUITS model;FRUITS Model based on Model 2 (Soncin et al. 2021)
DOI: 10.6084/m9.figshare.28778297.v1
title: Dong et al., Science, 2025

description: T. Dong, Z. Zeng <i>et al.</i>, <i>Code and data for </i>“<i>Record-breaking 2023 Marine Heatwaves</i>” figshare. (2025).
DOI: 10.6084/m9.figshare.6025040.v2
title: Do Developers Update Third-Party Libraries in Mobile Apps? - Appendix

description: One of the most common strategies to develop new software is to take advantage of existing source code, which is available in comprehensive packages called third-party libraries. As for all software systems, even these libraries change to offer new functionalities and fix bugs or security issues. The way the changes are propagated has been studied by researchers, interested in understanding their impact on the non-functional attributes of the systems source code. While the research community mainly focused on the change propagation phenomenon in the context of traditional applications, only little is known regarding the mobile context. In this paper, we aim at bridging this gap by conducting an empirical study on the evolution history of 291 mobile apps, by investigating (i) whether mobile developers actually update third-party libraries, (ii) which are the categories of libraries with respect to the developers' proneness to update their apps, (iii) what are the common patterns followed by developers when updating a software library, and (iv) whether high- and low-rated apps present peculiar update patterns. The results of the study showed that mobile developers rarely update their apps with respect to the used libraries, and when they do, they mainly tend to update the libraries related to the Graphical User Interface, with the aim of keeping the mobile apps updated with the latest design tendencies. In some cases developers ignore updates because of a poor awareness of the benefits, or a too high cost/benefit ratio. Finally, high- and low-rated apps present strong differences.
DOI: 10.17632/ywb5zdjk5x
title: Open-source hybrid 3D-bioprinter for simultaneous printing of thermoplastics and hydrogels

description: 3D-bioprinting is a promising technology applicable in areas such as regenerative medicine or in vitro organ model development. Various 3D-bioprinting technologies and systems have been developed and are partly commercially available. Here, we present the construction and characterization of an open-source low-cost 3D-bioprinter that allows the alternated microextrusion of hydrogel and fused deposition modeling (FDM) of thermoplastic filaments. The presented 3D-bioprinter is based on a conventional Prusa i3 MK3 printer and features two independent printheads: the original FDM-head and a piston-driven microextrusion system for soft materials. Modifications were designed modularly to fit various syringe formats or heating elements to the device. The bioprinter is the first hybrid DIY 3D-bioprinter that allows switching between materials as often as required during a print run to produce complex multi-material constructs with arbitrary patterns in each layer. For validation of the printer, two designs suitable for relevant bioprinting applications were realized. First, a porous plastic construct filled with hydrogel was printed, serving as a mechanically stable bone replacement tissue model. Second, a plastic chamber, which might be used in organ-on-a-chip applications, was printed with an extruded silicone sealing that enables the liquid-tight attachment of glass slides to the top and bottom of the chamber.
DOI: 10.6084/m9.figshare.22759007.v2
title: Sparganium stoloniferum SNP dataset

description: Sparganium stoloniferum SNP dataset
DOI: 10.6084/m9.figshare.26066269.v2
title: Source data for graphs of "The Southern Ocean carbon sink has been overestimated in the past three decades" in Communications Earth & Environment (https://doi.org/10.1038/s43247-024-01566-6).

description: Source data for graphs and charts of "The Southern Ocean carbon sink has been overestimated in the past three decades" in Communications Earth & Environment.
DOI: 10.6084/m9.figshare.29125886.v1
title: Supplementary Material for: Perioperative Management of Atypical Hemolytic Uremic Syndrome in a Patient on Maintenance Eculizumab Therapy: A Case Report and Review of the Literature

description: Introduction: Atypical hemolytic uremic syndrome (aHUS) is a rare, complement-mediated disorder characterized by hemolytic anemia, thrombocytopenia, and acute kidney injury. Eculizumab, a monoclonal antibody that inhibits complement component C5, is a cornerstone therapy for aHUS but increases the risk of infections, particularly from encapsulated organisms. Surgical procedures can also raise infection risks or exacerbate thrombotic microangiopathy (TMA). However, data on the perioperative management of patients with aHUS, particularly those receiving eculizumab, remain limited.
Case Presentation: A 73-year-old male with a history of prostate cancer presented with acute kidney injury, thrombocytopenia, and hemolysis, leading to a diagnosis of atypical hemolytic uremic syndrome (aHUS). He was treated with eculizumab, which improved kidney function and eliminated the need for dialysis. Four months later, he developed abdominal pain and was found to have gallstones. The patient subsequently underwent a laparoscopic cholecystectomy while continuing maintenance eculizumab therapy. The procedure was performed without any complications, and the patient was discharged in stable condition.
Conclusion: This case report details the successful perioperative management of a patient with aHUS on maintenance eculizumab undergoing cholecystectomy, highlighting the importance of careful management, including continued complement inhibition and infection prevention strategies. Our report emphasizes the need for individualized perioperative care to minimize risks in aHUS patients requiring surgery.