cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27968166.v1
title: The emergence of metabolisms through Earth history and implications for biospheric evolution

description: Associated material for the PTRSB manuscript, entitled 'The emergence of metabolisms through Earth history and implications for biospheric evolution' from Moody et al. 2025.File structure:Dated_Nodes: This includes the merged dating results with the reconciliationsDating_Results: Results from the molecular clock analysesGenes_Taxonomy_Tree: This includes the alignments, concatenation and species tree files, along with ID files.Metabolic_completeness_over_time: This includes the anvio estimations for the internal and external nodes across the species tree, line graphs for each of the metabolic modules over time, and also all the data used to generate them.Timeslice_KEGGs: This includes the different time-slice metabolisms inferred via anvio for figure 1A.Transfers: This includes the information used for the transfer and duplication analyses.<br>
DOI: 10.6084/m9.figshare.28369352
title: High-Resolution Transcriptional Impact of AIRE: Effects of Pathogenic Variants p.Arg257Ter, p.Cys311Tyr, and Polygenic Risk Variant p.Arg471Cys Supplementary File S2

description: RNAseq result tables of differential expression analysis using DESeq2 of transfected HEK293-FT cells with AIRE wt and pathogenic AIRE variants p.R257*,p.C311Y, and p.R471C. AIRE and AIRE Variants contrasted against empty vector transfected cells, and AIRE variants contrasted against AIRE wt.
DOI: 10.15468/dl.fh5tee
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-72.99494 -43.16581,-65.78257 -43.16581,-65.78257 -35.18836,-72.99494 -35.18836,-72.99494 -43.16581))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phasianus colchicus Linnaeus, 1758"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019614-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e5d4kz
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is An annotated type catalogue of the Cerambycidae (Insecta: Coleoptera) in the Zoological Museum Hamburg"
 ]
}

 The dataset includes 43 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019615-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25934/pr00010827
title: Exploring Viral Shedding, Symptom Dynamics, and Antiviral Efficacy in Influenza Transmission

description: Influenza, or the flu, is a common and highly contagious illness that poses significant risks to public health. Every year, millions of people are affected by the flu, leading to severe illness, hospitalizations, and even deaths, particularly among vulnerable groups such as young children, older adults, and those with chronic health conditions. The flu spreads quickly within households and communities, making it a persistent challenge for healthcare systems worldwide.

Antiviral medications, like baloxavir, are treatments designed to reduce the severity and duration of the flu. They work by lowering the amount of virus released by infected individuals (known as viral shedding), which may also decrease the likelihood of spreading the virus to others. However, there is still much to learn about how factors like viral shedding, the timing of symptoms, and the spread of the virus before symptoms appear contribute to flu transmission.

This research aims to address these gaps by analyzing data from CENTERSTONE study. Researchers will examine how factors such as the initial levels of virus in infected individuals, patterns of symptoms, and the timing of transmission events influence the spread of the flu within households. By studying these aspects, the project seeks to better understand household transmission dynamics, the role of antivirals in preventing the flu from spreading, especially the interplay with other factors affecting individual infectiousness. 

The findings from this study could help improve strategies to control flu outbreaks and inform public health policies. Specifically, the research could highlight ways to optimize the use of antiviral treatments to protect individuals, ultimately reducing the overall impact of the flu on communities.
DOI: 10.5281/zenodo.14824929
title: Data for publication 'Exploring Complexity Measures for Analysis of Solar Wind Structures and Streams'

description: The data and scripts used in the analysis for the paper 'Exploring Complexity Measures for Analysis of Solar Wind Structures and Streams'.
DOI: 10.15468/dl.3vbafw
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Peru",
 "TaxonKey is Coffea arabica L."
 ]
}

 The dataset includes 83 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019618-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/nkgq-xn90
title: Stereo mathing real scenes

description:  To evaluate SARNet’s generalization, we captured a real-world stereo dataset in Guangzhou using a binocular camera. The dataset includes diverse urban and natural scenes to assess SARNet’s performance beyond synthetic and benchmark datasets. Fig. 7 illustrates SARNet’s predictions on real-world scenes, KITTI 2012, and KITTI 2015. Experimental results demonstrate that SARNet generates clear and consistent disparity maps across both smooth and complex regions, highlighting its robustness in real-world depth estimation tasks. The dataset is publicly available on IEEE DataPort to support further research in stereo matching and autonomous perception.
DOI: 10.15468/dl.xtux5j
title: Occurrence Download

description: A dataset containing 28955 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Morpho Fabricius, 1807"
 ]
}

 The dataset includes 28955 records from 184 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019616-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h3u4cq
title: Occurrence Download

description: A dataset containing 28955 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Morpho Fabricius, 1807"
 ]
}

 The dataset includes 28955 records from 184 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019617-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5tmkkp
title: Occurrence Download

description: A dataset containing 28955 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Morpho Fabricius, 1807"
 ]
}

 The dataset includes 28955 records from 184 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019622-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9gb5jh
title: Occurrence Download

description: A dataset containing 468760 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carassius auratus (Linnaeus, 1758), Cyprinus carpio Linnaeus, 1758, Sander lucioperca (Linnaeus, 1758))",
 "HasCoordinate is true",
 "DecimalLatitude is less than 60",
 "DecimalLatitude is greater than -56",
 "DecimalLongitude is less than 180",
 "DecimalLongitude is greater than -145"
 ]
}

 The dataset includes 468760 records from 940 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019602-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s61oho
title: Occurrence Download

description: A dataset containing 1574 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is KUBI Invertebrate Zoology Collection"
 ]
}

 The dataset includes 1574 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007869-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qeqg1c
title: Occurrence Download

description: A dataset containing 2972 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mammal collection NTNU University Museum"
 ]
}

 The dataset includes 2972 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007581-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x7ccxs
title: Occurrence Download

description: A dataset containing 1965 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tamandua mexicana (Saussure, 1860)"
 ]
}

 The dataset includes 1965 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007079-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ezohoi
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "HasCoordinate is true",
 "TaxonKey is Centrolene buckleyi (Boulenger, 1882)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 114 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007869-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jhhdkn
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fimbristylis thermalis S.Watson",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (United States of America, Canada)"
 ]
}

 The dataset includes 59 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0269794-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1nynfl
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cecropia leucocoma Miq."
 ]
}

 The dataset includes 22 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006582-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e5asib
title: Occurrence Download

description: A dataset containing 184 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Japan",
 "TaxonKey is Eucalyptus L'Hér."
 ]
}

 The dataset includes 184 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007869-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.du6rtd
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "TaxonKey is Bitis gabonica Duméril, Bibron & Duméril, 1854",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 33 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007581-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q6ndrq
title: Occurrence Download

description: A dataset containing 5159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2017-2017"
 ]
}

 The dataset includes 5159 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197065-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15151/esrf-dc-1732137788
title: Human antibody (Fab) and P. aeruginosa T3SS protein PcrV-fragment complex

description: We study the mechanisms of actions of anti-PcrV monoclonal antibodies. X-Ray diffraction data was collected in ID30A-1 from a crystal of a P3D6-Fab:PcrV complex and the corresponding structure was solved at 2.56 Angstrom resolution by molecular replacement.
DOI: 10.15468/dl.2mqzag
title: Occurrence Download

description: A dataset containing 148 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Alouatta seniculus (Linnaeus, 1766)"
 ]
}

 The dataset includes 148 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061193-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nyw2s9
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "PublishingOrg is a344ee9f-f1b7-4761-be2c-58ee6d741395",
 "PublishingOrg is 396d5f30-dea9-11db-8ab4-b8a03c50a862",
 "PublishingOrg is 2cd829bb-b713-433d-99cf-64bef11e5b3e",
 "PublishingOrg is 90fd6680-349f-11d8-aa2d-b8a03c50a862",
 "PublishingOrg is bc092ff0-02e4-11dc-991f-b8a03c50a862",
 "PublishingOrg is 4bc4943a-c94f-4bd4-9aa3-2a9cae94398a",
 "PublishingOrg is 90cc71b0-055b-11d8-b84e-b8a03c50a862",
 "PublishingOrg is ae447c50-b8a8-11d8-92a4-b8a03c50a862",
 "PublishingOrg is a3790e34-ad24-4d74-b7d4-ad77a84c5e61"
 ]
 },
 "TaxonKey is Heterotis rotundifolia (Sm.) Jacq.-Fél."
 ]
}

 The dataset includes 216 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051520-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d0b6tv
title: Occurrence Download

description: A dataset containing 63527 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-100.20081 18.36495,-100.32166 18.13541,-100.32166 17.84283,-100.09094 17.54977,-99.95636 17.45023,-99.55536 17.57072,-99.37958 17.79054,-99.35486 18.04142,-99.44275 18.26065,-99.66248 18.41708,-99.86023 18.54212,-100.20081 18.36495))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 63527 records from 325 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006586-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aevkvh
title: Occurrence Download

description: A dataset containing 3006 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ortalis garrula (Humboldt, 1805), Ortalis garrula (Humboldt, 1805), Ortalis garrula (Humboldt, 1805))",
 "DecimalLatitude is greater than or equal to -14",
 "DecimalLatitude is less than or equal to 13",
 "DecimalLongitude is greater than or equal to -83",
 "DecimalLongitude is less than or equal to -60"
 ]
}

 The dataset includes 3006 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066331-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sh5txy
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllanthus kelleanus Jean F.Brunel"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073769-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5jetf4
title: Occurrence Download

description: A dataset containing 79581 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bromus hordeaceus L.",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1980",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Specimen"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Living Specimen"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Material sample"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Literature Occurrence"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Unknown evidence"
 ]
 }
 }
 ]
}

 The dataset includes 79581 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016586-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1yo1mq
title: Occurrence Download

description: A dataset containing 925 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Colaptes atricollis (Malherbe, 1850)"
 ]
}

 The dataset includes 925 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007582-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e55582
title: Occurrence Download

description: A dataset containing 464 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "OccurrenceStatus is Present",
 "TaxonKey is Buteo ventralis Gould, 1837"
 ]
}

 The dataset includes 464 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063654-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.keqqkf
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Gavialidae"
 ]
}

 The dataset includes 128 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024700-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3tlqnt
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thylamys macrurus (Olfers, 1818)",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007582-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmgx2x
title: Occurrence Download

description: A dataset containing 346965 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is KUBI Herpetology Collection"
 ]
}

 The dataset includes 346965 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007870-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nvnmsu
title: Occurrence Download

description: A dataset containing 277658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Elevation is less than or equal to 500.0m",
 "Geometry POLYGON((-180 59,180 59,180 61,-180 61,-180 59))",
 "HasCoordinate is true",
 "TaxonKey is Fungi",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 277658 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006587-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sdikou
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2013-2018",
 "Geometry POLYGON((-97.96293 32.28841,-96.12887 32.28841,-96.12887 33.02241,-97.96293 33.02241,-97.96293 32.28841))",
 "HasCoordinate is true",
 "TaxonKey is Strophostyles leiosperma (Torr. & A.Gray) Piper",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007582-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.