cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/dkc-9g1-mla
title: Galemys Kaup, 1829

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.16905496
title: AI, Mental Health, and Criminal Justice Reform
title: AI, Mental Health, and Criminal Justice Reform: Visionary Proposals for Public Safety
title: Democratic Sentencing and the Open Brain: Innovative Approaches to Crime and Society

description: This portfolio presents two original visionary proposals developed independently by Mariarosaria Ottaiano (Naples, Italy; London, UK).



The Open Brain – a framework for ethically redirecting AI-driven eye-tracking and behavioural analytics from commercial exploitation toward public health and safety. The concept explores how everyday digital devices could act as “open brains,” enabling early detection of mental health vulnerabilities, radicalisation risks, and criminal tendencies while safeguarding human rights.

Democratic Sentencing for Organized Crime – a novel legal model reframing organized crime as both a psychological pathology and a societal danger. The proposal envisions sentencing determined transparently by the population within strict legal frameworks, reducing corruption, weakening mafia power, and restoring justice as a shared social responsibility.


Both papers bridge AI, psychology, law, and human rights, combining feasible near-term research opportunities with long-term visionary thinking. This work is intended to inspire academic debate, public policy innovation, and interdisciplinary research.
DOI: 10.3535/62l-m8y-m1w
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/aw4-9pl-jnk
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4t5-dsv-4ld
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tlx-9f0-wc1
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5pv-5v3-755
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pxv-tjg-vpt
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d8a-yvn-8rf
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wen-14t-e1k
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8rz-pnv-42n
title: †Belemnitida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d9g-sbt-f4n
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/er7-0ay-j1w
title: †Protetragonites quadrisulcatus (d'Orbigny, 1841)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d27-mb4-lax
title: Duvalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lhe-2cp-v66
title: †Orbiculoidea d'Orbigny, 1847

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xzg-avd-wg5
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zx5-tak-gcr
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cwe-tdx-31k
title: Talpa Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p1n-tj2-3g2
title: Pycnodonte Fischer von Waldheim, 1835

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l3l-gff-mmt
title: Haploceras

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jp1-d1n-mjy
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x0l-s8g-qm6
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7k8-sr8-mqq
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wrp-0je-wb5
title: Helix Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gvw-309-2f6
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t69-n0t-r84
title: Galemys Kaup, 1829

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5ms-hst-4wl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/04w-mqq-fz3
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bn7-5xt-2br
title: †Trilobita

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/04b-r9w-l7y
title: †Protetragonites quadrisulcatus (d'Orbigny, 1841)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gdf-6hv-pe2
title: Duvalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jkd-m75-des
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/947-szc-kza
title: Chordata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8ng-6dj-mqy
title: Salenia Gray, 1835

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ebt-yqz-t29
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8ym-a23-sma
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nqg-6nw-cmp
title: Hibolithes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.14288/1.0416298
title: Has the time come? Public confidence, trust, and expectations for the oversight of invertebrates used in scientific research

description: In this study our aim was to undertake the first study to describe differences in confidence, trust, and expectations for the oversight of scientists using animals in research. Participants were presented with one of four treatments using a 2 by 2 design; terrestrial (T; mice and grasshoppers) vs aquatic (A; zebrafish and sea stars) and vertebrates (V; mice and zebrafish) vs invertebrate (I; grasshoppers and sea stars). A representative sample of census matched Canadian participants (n=959), on a 7-point scale, stated their confidence in oversight, trust in scientists and expectation of oversight for invertebrates. Participants’ open-ended text reasoning for confidence and expectations of oversight were subjected to thematic analysis. Confidence in oversight was highest for TV (mean±SE; 4.5±0.08) and AV (4.4±0.08), less for TI (3.8±0.10), and least for AI (3.5±0.08), indicating the absence of oversight decreased public confidence. Four themes emerged to explain participant confidence, centered on: 1) animals, 2) participant, 3) oversight system, and 4) science. Trust in scientists was similar for TV (4.3±0.07) and AV (4.2±0.07), but higher for TV compared to TI (4.1±0.07) and TV and AV compared to AI (4.0±0.06); absence of oversight decreased public trust in scientists. Participants believed invertebrates should receive some level of oversight but at two thirds of that currently afforded to vertebrates. Four primary themes emerged to explain participant expectation: 1) value of life, 2) animal experience, 3) participant centered, and 4) oversight system centered. We conclude that a gap exists between current and public expectations for the oversight of invertebrates which may threaten the social licence to conduct scientific research on these animals.
DOI: 10.14288/1.0406601
title: The differential roles of chronic and transient loneliness in daily prosocial behaviour

description: The dataset, R code and study materials were used for all analyses reported in: Lee, Y., Lay, J. C., Pauly, T., Graf, P., & Hoppmann, C. A. (2022). The differential roles of chronic and transient loneliness in daily prosocial behaviour. 1. Instruction (.txt format): "README.txt" 2. Data file (.csv format): "HARP_Loneliness+Prosocial+Behaviour_data.csv" 3. R syntax (.Rmd format): "HARP_Loneliness+Prosocial_Behaviour.Rmd" 4. Study materials (.pdf format): "HARP_Loneliness+Prosocial_Behaviour_studymaterials.pdf"
DOI: 10.14288/1.0412752
title: Interviews with 16 Attending Veterinarians at Canadian universities regarding institutional transparency

description: The objective of our study was to describe perceptions of transparency among Attending Veterinarians at different universities across Canada. Semi-structured, open-ended interviews were used to describe perceptions and experiences of 16 Attending Veterinarians relating to animal research transparency
DOI: 10.14288/1.0406687
title: Data from: Genotyping-in-Thousands by sequencing of archival fish scales reveals maintenance of genetic variation following a severe demographic contraction in kokanee salmon

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Historical DNA analysis of archival samples has added new dimensions to population genetic studies, enabling spatiotemporal approaches for reconstructing population histories and informing conservation management. Here we tested the efficacy of Genotyping-in-Thousands by sequencing (GT-seq) for collecting targeted single nucleotide polymorphism (SNP) genotypic data from archival scale samples, and demonstrate its application to a study of kokanee salmon (&lt;i&gt;Oncorhynchus nerka&lt;/i&gt;) in Kluane National Park and Reserve (KNPR; Yukon, Canada) that underwent a severe 12-year population decline followed by a rapid rebound. We genotyped archival scales sampled pre-crash and contemporary fin clips collected post-crash, revealing high coverage (&gt;90% average genotyping across all individuals) and low genotyping error (&lt;0.01% within-libraries, 0.60% among-libraries) despite the relatively poor quality of recovered DNA. We observed slight decreases in expected heterozygosity, allelic diversity, and effective population size post-crash, but none were significant, suggesting genetic diversity was retained despite the severe demographic contraction. Genotypic data also revealed the genetic distinctiveness of a now extirpated population just outside of KNPR, revealing biodiversity loss at the northern edge of the species distribution. More broadly, we demonstrate GT-seq as a valuable tool for genome-wide data collection from archival samples to address basic questions in ecology and evolution, and inform applied research in wildlife conservation and fisheries management.&lt;/p&gt;
DOI: 10.14288/1.0406479
title: Data to accompany 'New evidence suggests no sex bias in herbivory or plant defence'

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p style="text-align:start;text-indent:0px;margin-bottom:11px;"&gt;&lt;span&gt;&lt;span style="font-style:normal;"&gt;&lt;span&gt;&lt;span style="font-weight:normal;"&gt;&lt;span style="letter-spacing:normal;"&gt;&lt;span&gt;&lt;span&gt;&lt;span style="white-space:normal;"&gt;&lt;span&gt;&lt;span&gt;&lt;span&gt;Dioecious plants can exhibit sexual dimorphism across a suite of plant traits, including susceptibility to herbivory and secondary chemistry. One hypothesis is that, due to greater costs of reproduction in females, males should grow faster and invest less in defense, resulting in male-biased herbivory. Indeed, a series of papers and a prominent meta-analysis have established male-biased herbivory as a robust result. However, more recent reviews have raised questions about how general the pattern is, citing the low breadth of taxon sampling. The literature on this topic has not been formally quantified by meta-analysis in over 15 years. Here we report the results of a meta-analysis of studies that measured sex bias in either herbivory and/or secondary defense in 71 dioecious plant species. We added 58 observations of herbivory and 41 of secondary chemistry to the original. We control for non-independence of effects from the same study and taxonomic group to address critiques of earlier studies. For secondary chemistry, we found no support for any consistent difference between male and female plants. For herbivory, results are directionally similar to earlier reports, although not statistically significant once we accounted for taxonomic group and study. We also found that the magnitude and direction of the effect of plant sex on herbivory declines, with earlier studies reporting a stronger male-bias. We discuss our results in light of the ‘decline effect’ and consider whether the datasets exhibit signs of evidence of the type(s) of biases that can result in declining effect sizes over time.&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/p&gt;
DOI: 10.14288/1.0406689
title: Replication Data for: Higher Doses Improve Walking Recovery During Stroke Inpatient Rehabilitation

description: This data set is for the article entitled: Higher Doses Improve Walking Recovery During Stroke Inpatient Rehabilitation.
DOI: 10.14288/1.0406688
title: Replication Data for: Passive, yet not inactive: robotic exoskeleton walking increases cortical activation dependent on task

description: This dataset is for article: Peters S, Lim SB, Louie DR, Yang CL, Eng JJ. Passive, yet not inactive: robotic exoskeleton walking increases cortical activation dependent on task. J Neuroeng Rehabil. 2020 Aug 10;17(1):107. doi: 10.1186/s12984-020-00739-6. PMID: 32778109
DOI: 10.14288/1.0413226
title: Using SAR Imagery to Assess Forest Distribution on a Cloudy Tropical Island

description: Tropical forests experience some of the highest rates of deforestation in the world. Accurate mapping and monitoring of the forest is required to mitigate this deforestation, which is complicated in tropical forests due to the high frequency of cloud cover. Synthetic aperture radar (SAR) imagery can overcome this challenge by seeing through the clouds. However, the historical lack of freely available SAR imagery means its role in characterizing forest cover is less developed than that of optical imagery. This study aimed to compare freely available SAR imagery with freely available optical imagery in order to characterize the forest cover of a particularly cloudy, mountainous tropical forest in the Philippines. SAR imagery was downloaded from Sentinel-1 and ALOS-PALSAR-2 missions while optical imagery from Sentinel-2 was used. Single date images from January 2016 were selected used along with derived forest cover metrics as inputs into a two-class Random Forest classification. The results showed that optical imagery outperforms the SAR models with a 97% overall accuracy compared to 88% for the L-band PALSAR-2 data. The predicted maps created using only SAR inputs are significantly noisier than models that included optical data. SAR maps had high levels of speckling throughout the image which made interpretation difficult at larger spatial scales. The SAR map performed worse in the more mountainous areas. The results demonstrate that SAR cannot directly replace optical for the most mountainous, cloud-prone areas.
DOI: 10.14288/1.0407248
title: Identification of infectious agents in early marine Chinook and Coho salmon associated with cohort survival

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p style="margin-bottom:11px;"&gt;Recent decades have seen an increased appreciation for the role infectious diseases can play in mass mortality events across a diversity of marine taxa. At the same time many Pacific salmon populations have declined in abundance as a result of reduced marine survival. However, few studies have explicitly considered the potential role pathogens could play in these declines. Using a multi-year dataset spanning 59 pathogen taxa in Chinook and Coho salmon sampled along the British Columbia coast, we carried out an exploratory analysis to quantify evidence for associations between pathogen prevalence and cohort survival, and between pathogen load and body condition. While a variety of pathogens had moderate to strong negative correlations with body condition or survival for one host species in one season, we found that &lt;em&gt;Tenacibaculum maritimum&lt;/em&gt; and Piscine orthoreovirus had consistently negative associations with body condition in both host species and seasons, and were negatively associated with survival for Chinook salmon collected in the fall and winter. Our analyses, which offer the most comprehensive examination of associations between pathogen prevalence and Pacific salmon survival to date, suggest that pathogens in Pacific salmon warrant further attention, especially those whose distribution and abundance may be influenced by anthropogenic stressors.&lt;/p&gt;
DOI: 10.14288/1.0412938
title: Nature of War: The Political Ecology of the 2020 Nagorno-Karabakh Conflict

description: The Nagorno-Karabakh conflict has had profound consequences for both the political and physical geography of the South Caucasus region. Since the fighting of the 1990s there has been a relative status quo, with a militarised line of contact separating the two sides. This changed on September 27 2020, when intense fighting erupted along the whole of the front, and especially in the south-east. After a month and a half, fighting concluded on 10 November 2020 which saw the implementation of a ceasefire which ceded large portions of the Nagorno-Karabakh (Artsakh) Republic to Azerbaijan. There has yet to be an investigation on the kinds of changes to human and natural systems that the most recent conflict (2020) engendered. In response to this research lacuna, this paper asked whether the effects of the 2020 armed conflict had a significant effect on the region’s agricultural systems. This paper approached the question by examining per-pixel NDVI metrics - derived from Landsat 8 composites from April through June - before and after the conflict. These per-pixel metrics were correlated with conflict data from ACLED. This approach aims to test the hypothesis that areas which witnessed the most intense fighting saw significant drops in NDVI, indicating land fallowness and abandonment. The results from this study indicate that conflict intensity has a significant effect on vegetation health (p-value &lt; 2.2e-16), and supports the hypothesis that conflict leads to a decrease in NDVI, however conflict intensity on its own does not have strong explanatory power for estimating changes in NDVI (R2 0.09667) and future work ought to segment the study area in order to obtain a non-obfuscated regression coefficient (coefficient -0.0057322).
DOI: 10.14288/1.0412177
title: Predicting Forage Availability from Open Source LiDAR Data

description: Livestock forage availability is an important factor when allocating land for grazing animals. Due to the variation in British Columbia’s topography and plant communities, rangeland management faces unique challenges with natural resource operations and rural development. The goal of this study was to create a predictive model of forage availability using light detection and ranging (LiDAR) data from the Open LiDAR Data Portal and biometric ground truthing data from the Vegetation Resource Index. LiDAR point cloud was filtered to &lt; 2m returns to capture understory vegetation prior to modeling. The predicative model created from single linear regression using the lidar metric pzabovezmean produced an insignificant result (R2 0.11, p-value 0.08). Random forest model with the inclusion of topographic variables derived from digital elevation model could not produce a better result than the single linear regression (R2 0.01, p-value 0.76). Possible sources of errors in the model and data acquisition are explored to justify the insignificant results. Recommendations are made for increasing understory point density using alternative LiDAR acquisition methods and employing vertical stratum sampling for understory ground truthing data. Height entropy of returns (Zentropy) metric shows potential in estimation of forage biomass but further research is recommended to validate this hypothesis.
DOI: 10.14288/1.0412731
title: Integrating laboratory experiments and biogeographic modelling approaches to understand sensitivity to ocean warming in rare and common marine annelids

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;&lt;span lang="EN-GB"&gt;Among ectotherms, rare species are expected to have a narrower thermal niche breadth and reduced acclimation capacity and thus be more vulnerable to global warming than their common relatives. To assess these hypotheses, we experimentally quantified the thermal sensitivity of seven common, uncommon, and rare species of temperate marine annelids of the genus &lt;em&gt;Ophryotrocha&lt;/em&gt; to assess those species’ vulnerability to ocean warming. We measured the upper and lower limits of physiological thermal tolerance, survival, and reproductive performance of each species along a temperature gradient (18, 24, and 30 °C). We then combined this information to produce curves of each species’ fundamental thermal niche by including trait plasticity. Each thermal curve was then&lt;/span&gt; &lt;span lang="EN-GB"&gt;expressed as a habitat suitability index (HSI) and projected for the Mediterranean Sea and temperate Atlantic Ocean under a present day (1970-2000), mid- (2050-2059) and late- (2090-2099) 21st Century scenario for two climate change scenarios (RCP2.6 and RCP8.5). Rare and uncommon species showed a reduced upper thermal tolerance compared to common species, and the niche breadth and acclimation capacity were comparable among groups. The simulations predicted an overall increase in the HSI for all species and identified potential hotspots of HSI decline for uncommon and rare species&lt;/span&gt; &lt;span lang="EN-GB"&gt;along the warm boundaries of their potential distribution, though they failed to project the higher sensitivity of these species into a greater vulnerability to ocean warming. In the discussion, we provide elements and caveats on the implications of our results for conservation efforts.&lt;/span&gt;&lt;/p&gt;
DOI: 10.15468/dl.sqpxpq
title: Occurrence Download

description: A dataset containing 4217 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Caracterización florística de las Sabanas del Yarí en el municipio de La Macarena, Meta"
 ]
}

 The dataset includes 4217 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000481-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kp3tv8
title: Occurrence Download

description: A dataset containing 246 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rheum nanum"
 ]
}

 The dataset includes 246 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035963-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.