cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4047074
title: Clouds and Radiation in a mock-Walker Circulation model output

description: Data used in the creation of figures for Silvers and Robinson, Clouds and Radiation in a mock-Walker Circulation. 2020, JAMES. These experiments are described in detail in the paper. They use the AM4.0 physics package on a doubly periodic domain with a warm patch of SST that is fixed in time at the center of the domain. Grid-Spacings of 1km, 2km, 25km, and 100km are explored on different domain sizes. The data set focuses on analysis of the atmospheric circulation and cloud response to this SST warm region. For questions please contact Levi Silvers at levi.silvers@stonybrook.edu, thomas.robinson@noaa.gov Directory contents are described below: #=========================================================================================<br> # data for the P100, P100L, P25, P25L, E25 experiments are in the following directories <br> #=========================================================================================<br> # P100<br> c8x40L33_am4p0_100km_wlkr_ent0p9<br> c8x40L33_am4p0_100km_wlkr_ent0p9_lwoff<br> # P100L<br> c8x160L33_am4p0_100km_wlkr_ent0p9<br> c8x160L33_am4p0_100km_wlkr_ent0p9_lwoff<br> # P25<br> c8x160L33_am4p0_25km_wlkr_ent0p9<br> c8x160L33_am4p0_25km_wlkr_ent0p9_lwoff<br> # P25L<br> c8x640L33_am4p0_25km_wlkr_ent0p9<br> c8x640L33_am4p0_25km_wlkr_ent0p9_lwoff<br> # E25<br> c8x160L33_am4p0_25km_wlkr_ent0p9_noconv<br> c8x160L33_am4p0_25km_wlkr_ent0p9_noconv_lwoff # within the directories for each of these experiments: P100, P100L, P25, P25L, E25<br> # there are two files: 1979th1983_daily.nc and 1980th1983.atmos_month_tmn.nc # within each of these files are the following variables: <br> 1979th1983_daily.nc<br> 'prec_conv'<br> 'prec_ls'<br> 'precip' 1980th1983.atmos_month_tmn.nc<br> 'ps'<br> 'temp'<br> 'ucomp'<br> 'w'<br> 'sphum'<br> 'cld_amt'<br> 'z_full'<br> 'precip'<br> 'prec_conv'<br> 'prec_ls'<br> 'rh'<br> 'tot_liq_amt'<br> 'tot_ice_amt'<br> 'tdt_lw'<br> 'evap'<br> 'shflx' <br> #=========================================================================================<br> # data for the E1 and E2 experiments are in the following directories <br> #=========================================================================================<br> # E1 <br> c10x4000L33_am4p0_1km_wlkr_4K<br> c10x4000L33_am4p0_1km_wlkr_4K_lwoff<br> # E2 <br> c50x2000L33_am4p0_2km_wlkr_4K<br> c50x2000L33_am4p0_2km_wlkr_4K_lwoff # within each of these directories are two files: 1979_6mn.atmos_month.nc and 1979.6mn.atmos_daily_selvars.nc<br> # these files contain the following variables: # 1979_6mn.atmos_month.nc<br> tdt_lw<br> t_surf<br> evap<br> shflx<br> tot_ice_amt<br> tot_liq_amt<br> rh<br> precip<br> z_full<br> cld_amt<br> sphum<br> ucomp<br> temp <br> w<br> ps<br> shflx # 1979.6mn.atmos_daily_selvars.nc<br> t_surf<br> ps<br> precip Acknowledgment: Aparna Radhakrishnan supported the provision of this Zenodo DOI. <br>
DOI: 10.5281/zenodo.4047032
title: Clouds and Radiation in a mock-Walker Circulation model output

description: Data used in the creation of figures for Silvers and Robinson, Clouds and Radiation in a mock-Walker Circulation. 2020, JAMES. These experiments are described in detail in the paper. They use the AM4.0 physics package on a doubly periodic domain with a warm patch of SST that is fixed in time at the center of the domain. Grid-Spacings of 1km, 2km, 25km, and 100km are explored on different domain sizes. The data set focuses on analysis of the atmospheric circulation and cloud response to this SST warm region. For questions please contact Levi Silvers at levi.silvers@stonybrook.edu, thomas.robinson@noaa.gov Directory contents are described below: #=========================================================================================<br> # data for the P100, P100L, P25, P25L, E25 experiments are in the following directories <br> #=========================================================================================<br> # P100<br> c8x40L33_am4p0_100km_wlkr_ent0p9<br> c8x40L33_am4p0_100km_wlkr_ent0p9_lwoff<br> # P100L<br> c8x160L33_am4p0_100km_wlkr_ent0p9<br> c8x160L33_am4p0_100km_wlkr_ent0p9_lwoff<br> # P25<br> c8x160L33_am4p0_25km_wlkr_ent0p9<br> c8x160L33_am4p0_25km_wlkr_ent0p9_lwoff<br> # P25L<br> c8x640L33_am4p0_25km_wlkr_ent0p9<br> c8x640L33_am4p0_25km_wlkr_ent0p9_lwoff<br> # E25<br> c8x160L33_am4p0_25km_wlkr_ent0p9_noconv<br> c8x160L33_am4p0_25km_wlkr_ent0p9_noconv_lwoff # within the directories for each of these experiments: P100, P100L, P25, P25L, E25<br> # there are two files: 1979th1983_daily.nc and 1980th1983.atmos_month_tmn.nc # within each of these files are the following variables: <br> 1979th1983_daily.nc<br> 'prec_conv'<br> 'prec_ls'<br> 'precip' 1980th1983.atmos_month_tmn.nc<br> 'ps'<br> 'temp'<br> 'ucomp'<br> 'w'<br> 'sphum'<br> 'cld_amt'<br> 'z_full'<br> 'precip'<br> 'prec_conv'<br> 'prec_ls'<br> 'rh'<br> 'tot_liq_amt'<br> 'tot_ice_amt'<br> 'tdt_lw'<br> 'evap'<br> 'shflx' <br> #=========================================================================================<br> # data for the E1 and E2 experiments are in the following directories <br> #=========================================================================================<br> # E1 <br> c10x4000L33_am4p0_1km_wlkr_4K<br> c10x4000L33_am4p0_1km_wlkr_4K_lwoff<br> # E2 <br> c50x2000L33_am4p0_2km_wlkr_4K<br> c50x2000L33_am4p0_2km_wlkr_4K_lwoff # within each of these directories are two files: 1979_6mn.atmos_month.nc and 1979.6mn.atmos_daily_selvars.nc<br> # these files contain the following variables: # 1979_6mn.atmos_month.nc<br> tdt_lw<br> t_surf<br> evap<br> shflx<br> tot_ice_amt<br> tot_liq_amt<br> rh<br> precip<br> z_full<br> cld_amt<br> sphum<br> ucomp<br> temp <br> w<br> ps<br> shflx # 1979.6mn.atmos_daily_selvars.nc<br> t_surf<br> ps<br> precip Acknowledgment: Aparna Radhakrishnan supported the provision of this Zenodo DOI. <br>
DOI: 10.6073/pasta/31abdec75754159c975b31cd9afeb5bb
title: Streamflow data for Albion camp, 1981 - ongoing.

description: This is a summary of discharges from the Green Lakes Basin (7.1 km2 area) and is based on stage records from the control section in the channel, about 50 m downstream of the culvert under the road at the Albion camp, and consists of daily flow volumes. Initially, instrumentation consisted of a Leupold-Stevens A70 float recorder. The site was initially instrumented with an Omnidata EZ900 data logger system interfaced to a Keller 1 psi pressure transducer on 29 June 1993. In order to establish cross-calibration between the 2 forms of instrumentation, both were planned to be used through 1994. In 2005, a Campbell cr10x data logger was installed; it was replaced by a Campbell cr1000 in 2013.
DOI: 10.6073/pasta/519f15451572fed42f6798f5d267f8af
title: Streamflow data for Saddle stream, 1999 - ongoing.

description: This is a summary of discharges from the stream draining Niwot Ridge Saddle to the south and is based on stage records gauged at a timber weir with a 120 degree V-notch plate, located 30 m upstream of Green Lakes road. It consists of daily flow volumes.
DOI: 10.5281/zenodo.4048377
title: Annual Gas & Electricity demand data for Dublin Emissions Trading System (ETS) industrial buildings as of November 2019

description: AER Reports.zip Pdfs of individual Dublin buildings each containing energy data from http://epa.ie/licensing/ EPA Reports.xlsx Extracted energy data from AER Reports into a single spreadsheet
description: https://github.com/energy-modelling-ireland/energy-data-sources
DOI: 10.5281/zenodo.5211259
title: Transmission spectroscopy lecture data

description: FORS2 transmission spectroscopy data for lectures.
DOI: 10.5281/zenodo.5211258
title: Transmission spectroscopy lecture data

description: FORS2 transmission spectroscopy data for lectures.
DOI: 10.6084/m9.figshare.14806683
title: Disentangling the role of sex dimorphism and forest structure as drivers of growth and wood density in expanding Juniperus thurifera L. woodlands

description: Dataset for the manuscript Radial growth and wood density in expanding Juniperus thurifera L. woodlands are better predicted by forest structure variability than sex
DOI: 10.6084/m9.figshare.14806683.v1
title: Disentangling the role of sex dimorphism and forest structure as drivers of growth and wood density in expanding Juniperus thurifera L. woodlands

description: Dataset for the manuscript Radial growth and wood density in expanding Juniperus thurifera L. woodlands are better predicted by forest structure variability than sex
DOI: 10.6084/m9.figshare.11988687.v2
title: Analysis of Interval Censored Competing Risk Data via Nonparametric Multiple Imputation

description: In many clinical studies, the time to event of interest may involve several causes of failure. Furthermore, when the failure times are not completely observed, and instead are only known to lie somewhere between two observation times, interval censored competing risk data occur. For estimating regression coefficient with right censored competing risk data, Fine and Gray introduced the concept of censoring complete data and derived an estimating equation using an inverse probability censoring weight technique to reflect the probability being censored. As an alternative to achieve censoring complete data, Ruan and Gray considered to directly impute a potential censoring time for the subject who experienced the competing event. In this work, we extend Ruan and Gray’s approach to interval censored competing risk data by applying a multiple imputation technique. The suggested method has an advantage to be easily implemented by using several R functions developed for analyzing interval censored failure time data without competing risks. Simulation studies are conducted under diverse schemes to evaluate sizes and powers and to estimate regression coefficients. A dataset from an AIDS cohort study is analyzed as a real data example.
DOI: 10.6084/m9.figshare.12445388
title: Risk-Based Similarity Testing for Potency Assays Using MCMC Simulations

description: In potency assays, the relative potency (RP) is the measure of the biological activity of a test product relative to a reference standard. It is calculated as the horizontal difference between the log(concentration)–response curves of each product. Parallelism (or similarity) between those curves is required for the RP to be meaningful. The literature proposes equivalence tests for similarity, based on the ratio of the curve parameters. Deriving equivalence margins (or a zone of declared similarity) to avoid rejecting good curves (lab risk) or accepting bad curves (consumer risk) often requires historical data. In this article, we propose a three-step derivation of the similarity zone to control for both consumer and lab risk, even when historical data are not available. In addition, we propose a way to test for parallelism that accounts for the correlations among the ratios of curve parameter estimates.
DOI: 10.6084/m9.figshare.12445388.v1
title: Risk-Based Similarity Testing for Potency Assays Using MCMC Simulations

description: In potency assays, the relative potency (RP) is the measure of the biological activity of a test product relative to a reference standard. It is calculated as the horizontal difference between the log(concentration)–response curves of each product. Parallelism (or similarity) between those curves is required for the RP to be meaningful. The literature proposes equivalence tests for similarity, based on the ratio of the curve parameters. Deriving equivalence margins (or a zone of declared similarity) to avoid rejecting good curves (lab risk) or accepting bad curves (consumer risk) often requires historical data. In this article, we propose a three-step derivation of the similarity zone to control for both consumer and lab risk, even when historical data are not available. In addition, we propose a way to test for parallelism that accounts for the correlations among the ratios of curve parameter estimates.
DOI: 10.6084/m9.figshare.11988687.v1
title: Analysis of interval censored competing risk data via nonparametric multiple imputation

description: In many clinical studies, the time to event of interest may involve several causes of failure. Furthermore, when the failure times are not completely observed, and instead are only known to lie somewhere between two observation times, interval censored competing risk data occur. For estimating regression coefficient with right censored competing risk data, Fine and Gray (1999) introduced the concept of censoring complete data and derived an estimating equation using an IPCW (Inverse probability censoring weight) technique to reflect the probability being censored. As an alternative to achieve censoring complete data, Ruan and Gray (2008) considered to directly impute a potential censoring time for the subject who experienced the competing event. In this work, we extend Ruan and Gray’s approach to interval censored competing risk data by applying a multiple imputation technique. The suggested method has an advantage to be easily implemented by using several R functions developed for analyzing interval censored failure time data without competing risks. Simulation studies are conducted under diverse schemes to evaluate sizes and powers and to estimate regression coefficients. A data set from an AIDS cohort study is analyzed as a real data example.
DOI: 10.6084/m9.figshare.11988687
title: Analysis of Interval Censored Competing Risk Data via Nonparametric Multiple Imputation

description: In many clinical studies, the time to event of interest may involve several causes of failure. Furthermore, when the failure times are not completely observed, and instead are only known to lie somewhere between two observation times, interval censored competing risk data occur. For estimating regression coefficient with right censored competing risk data, Fine and Gray introduced the concept of censoring complete data and derived an estimating equation using an inverse probability censoring weight technique to reflect the probability being censored. As an alternative to achieve censoring complete data, Ruan and Gray considered to directly impute a potential censoring time for the subject who experienced the competing event. In this work, we extend Ruan and Gray’s approach to interval censored competing risk data by applying a multiple imputation technique. The suggested method has an advantage to be easily implemented by using several R functions developed for analyzing interval censored failure time data without competing risks. Simulation studies are conducted under diverse schemes to evaluate sizes and powers and to estimate regression coefficients. A dataset from an AIDS cohort study is analyzed as a real data example.
DOI: 10.5281/zenodo.5211939
title: Data for the Article: Prediction of tone detection thresholds in interaurally delayed noise based on interaural phase difference fluctuations

description: No description provided.
DOI: 10.17632/j2wpp8mppb.1
title: Research data supporting the research paper 'The Sustainability Liability Revisited: Positive versus Negative Differentiation of Novel Products by Sustainability Attributes'

description: This object contains research data (SPSS data and syntax of analyses) of two studies featured in the research paper: "The Sustainability Liability Revisited: Positive versus Negative Differentiation of Novel Products by Sustainability Attributes" by Sonja Kunz, Arnd Florack, Ines Campuzano and Hans Alves, published in the Journal Appetite.
DOI: 10.17632/wrkbj9txwz.1
title: BOD data

description: BOD attributes data
DOI: 10.17632/d6g8zyj8r5.1
title: Research data for the manuscript "On the combination of capacitive sensing and electrochemical impedance spectroscopy to obtain characteristic properties of a dielectric thin film"

description: ### Supplementary Research Data for the manuscript ### "On the combination of capacitive sensing and electrochemical impedance spectroscopy to obtain characteristic properties of a dielectric thin film" ### by Benedikt Sapotta, Matthias Schwotzer, Christof Wöll and Matthias Franzreb ### Content # 1 Impedance_Raw_Data - calibration data for the IDE geometry, only the frequency range 1-2 MHz was used, as mentioned in the main text - impedance sweeps recorded at the end of linker cycles - impedance sweeps recorded at the end of metal cycles - fit results to the equivalent circuit model - animated bode plot of the growth process # 2 Monte_Carlo_Error_Propagation - script and readily compiled input data for the error propagation in accordance to the data flow chart in Fig S4 the script is based on the python programming language and needs to be saved as a .py file # 3 Micrographs - Micrographs used in the manuscript and supporting information # 4 3D_Print_Files_for_Flow_Cell - .stl files of the individual components. The Pogo-Pins were embedded into the mounting using the same Plasgray polymer resin. - two UNF 1/4" 28G threads were cut into the FlowCell at the designated holes after printing for liquid connection - the individual components were fastend with M3 screws # 5 XRD - XRD data of the uncoated and coated IDE geometry
DOI: 10.17632/796dy6424z.2
title: JIE_DCP_USD

description: This is the replication file for the paper "Dominant-currency pricing and the global output spillovers from US dollar appreciation" by G. Georgiadis and B. Schumann
DOI: 10.17632/c6wxkvy4z3.1
title: QEHeat: An open-source energy flux calculator for the computation of heat-transport coefficients from first principles

description: We give a detailed presentation of the theory and numerical implementation of an expression for the adiabatic energy flux in extended systems, derived from density-functional theory. This expression can be used to estimate the heat conductivity from equilibrium ab initio molecular dynamics, using the Green-Kubo linear response theory of transport coefficients. Our expression is implemented in an open-source component of the Quantum ESPRESSO suite of computer codes for quantum mechanical materials modeling, which is being made publicly available.
DOI: 10.17632/whx8b9mwhb.1
title: Expectations Anchoring and Inflation Persistence

description: Replication files for "Expectations Anchoring and Inflation Persistence". R. Bems, F. Caselli, F. Grigoli, B. Gruss. JIE 2021
DOI: 10.25345/c5qg17
title: MassIVE MSV000087993 - Rewinding the molecular clock: chimpanzee, human, cow and pig tandem mass spectra for phylogenetic analysis
title: This repository contains the data underlying Figure 1 in our Perspective on the seminal 1960 PNAS paper "A Comparison of Animal Hemoglobins by Tryptic Peptide Pattern Analysis" by Emile Zuckerkandl, Richard T. Jones and Linus Pauling. These data and phylogenetic analysis are also available at https://osf.io/hm8dq/. The orbitrap data were graciously provided with permission from a collaboration with Dr. Michael G. Janech (College of Charleston) as part of the CoMPARe Program (Comparative Mammalian Proteome Aggregator Resource). Specifically, the cow samples were provided by Dr. Paola Boggiatto and Dr. Randy Sacco at the National Animal Disease Center, ARS, USDA, Ames, IA. The chimpanzee samples were provided by the Chattanooga Zoo, while the pig samples were from the Medical University of South Carolina (Charleston, SC). The human data were generated using digestions of NIST SRM 909c Frozen Human Serum. In addition to institutional permits and approval, data collection was performed under NIST ACUC MML-AR20-0001.
DOI: 10.17632/d6nn2xgv6k.1
title: data and code for "Constructing multiple-objective portfolio selection for green innovation and dominating green-innovation indexes"

description: data and code
DOI: 10.17632/9xbjcg6w5s.1
title: AWnet + data

description: This dataset is supplementary data for: Waldron, A., Ulusoy, A. J., Pecci, F., and Stoianov, I. (2021). Principal Component Based Sampling for the Continuous Maintenance of Hydraulic Models, Journal of Water Research (currently under review). The files associated with this dataset are licensed under a Creative Commons Attribution 4.0 International licence. Any use of this dataset must credit the authors by citing the above paper. AWnet is an operational network in Newmarket, UK, operated by Anglian Water in collaboration with the InfraSense Labs at Imperial College London. The data provided is a the product of a long term research partnership between Anglian Water and Infrasense Labs at Imperial College London. We acknowledge the financial support of EPSRC (EP/P004229/1, Dynamically Adaptive and Resilient Water Supply Networks for a Sustainable Future). All data provided is recorded hydraulic data with locations and names anonymised. The authors hope that the publication of this dataset will facilitate the reproducibility of research in hydraulic model calibration and maintenance as well as broader research in the water distribution sector.
DOI: 10.17632/mdgz8kxpdh.1
title: Nutrient Supply to Planetary Biospheres from Anoxic Weathering of Mafic Oceanic Crust

description: Experimental data from the oxygenated and anoxic basalt weathering experiments, including solution chemistry and mineral characterization by X-ray absorption spectroscopy/fluorescence microscopy
DOI: 10.17632/ftkm7775kn.2
title: Barca et al., 2021. Supplemental Tables.

description: Effect of pegbovigrastim on fertility and culling: Randomized controlled trial.
DOI: 10.17632/72sh3pp4m2.1
title: Local IBD Benchmark

description: Simulated local IBD graph files from our paper "Selecting Clustering Algorithms for IBD Mapping".
DOI: 10.17632/6ztp67zs75.1
title: Functional Analysis of problem behavior on Brazil: a systematic review

description: This data refers to research done in Brazil in 2020 about Functional Analysis of Problem Behavior.
DOI: 10.17632/dfx4b9dy2y.1
title: LE&QR

description: The dataset consists of 45144 D1-D2-A models, characterized by the energy gap and the electronic coupling (J) between D1 and D2 and the frequency and Huang-Rhys factor (\Sigma) of the intramolecular vibrational mode serving as a vibronic ratchet. The dataset contains the calculated values of the acceptor yields at 1 ps (A_1ps) for each of these models.
DOI: 10.17632/n5s62h3zzc.1
title: Abid lab research data for article named: Optimization of mito-roGFP protocol to measure mitochondrial oxidative status in human coronary artery endothelial cells

description: This dataset provides useful information for researchers planning to standardize the mito-roGFP protocol in their labs. To better understand this data, we suggest using the notebook notes as a guide to visualize the original .nd2 file and excel graph report. Alternatively, a summary of graph reports for each day and sample is provided as a .pptx file and can be visualized along with the notebook notes for a clear understanding of hydrogen peroxide optimization procedures. This data was obtained from a culture of HCAEC at passage 3. Note: .nd2 files can be visualized with the free version of NIS Elements software.