cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/obzzn2
title: Données du Groupe d'étude des Cétacés de Méditerranée - Données d'observations de cétacés par le Groupe d'étude des Cétacés de Méditerranée (GECEM) de 2009 à 2012

description: Données d'observations de cétacés récoltées par le Groupe d'étude des Cétacés de Méditerranée (GECEM) de 2009 à 2012.

Ces données sous soumises à un processus de validation. 



Ce jeu a contribué à l'atlas des Mammifères marins publié en 2016.
DOI: 10.15468/j4e2cj
title: Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Grive draine 2004 - 2008 Coordonnées GPS Lambert 93

description: Aire de reproduction de l'espèce Grive draine fondée sur la présence de mâles chanteurs au printemps (avril – juin), à partir de points d’écoutes répartis le long d’itinéraires échantillons. Environ 5 000 points ont été visités chaque année entre 2004 et 2008
DOI: 10.15468/dl.jqnrdd
title: Occurrence Download

description: A dataset containing 2350 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.8188 25.19913, -110.6688 25.19913, -110.6688 25.34913, -110.8188 25.34913, -110.8188 25.19913))"
 ]
}

 The dataset includes 2350 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043760-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h78ete
title: Occurrence Download

description: A dataset containing 950134 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Benin",
 "Year 2000-2025"
 ]
}

 The dataset includes 950134 records from 335 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043738-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/izrly0
title: CardObs : Observations naturalistes issues de l'outil CardObs-Données naturalistes de Pierre FRAPA

description: Les données issues de l'outil de gestion CardObs et de son application mobile Carnat (hors programme relavant d'un cadre d'acquisition spécifique) regroupent les observations de naturalistes expérimentés. Ces observations concernent la faune, la flore et la fonge tant continentales que marines. L’emprise géographique des saisies couvre la France métropolitaine et l’Outre-mer. Les données peuvent être opportunistes aussi bien que protocolées en fonction des utilisateurs, et peuvent disposer de champs complémentaires propres à chaque jeu de données. L'outil CardObs a été mis en place en 2007 par le Service du Patrimoine Naturel du MNHN. Il est actuellement géré par PatriNat (OFB, MNHN, CNRS, IRD).
DOI: 10.15468/u2lywa
title: Données Odonates 2015 de l'Association naturaliste d'étude et de protection des écosystèmes CAUDALIS

description: Données Odonates 2015 de l'Association naturaliste d'étude et de protection des écosystèmes CAUDALIS
DOI: 10.15468/dl.97nbrf
title: Occurrence Download

description: A dataset containing 3418 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sardinella albella"
 ]
}

 The dataset includes 3418 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043761-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjmgrz
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.6688 25.19913, -110.5188 25.19913, -110.5188 25.34913, -110.6688 25.34913, -110.6688 25.19913))"
 ]
}

 The dataset includes 78 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043762-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/qvaq0d
title: Bilans des saisons de capture de l'Association Départementale des Piégeurs Agréés de Gironde - Saison 2013/2014 de piégeage en Gironde

description: Le jeu de données contient les données de la saison de piégeage 2013/2014 effectuée sur le département de la Gironde. Le nombre de captures par espèce est restitué par commune et par piégeur pour la saison.
DOI: 10.15468/sushad
title: Données d'oiseaux

description: L'expertise "oiseaux" GPSO s’intéresse aux oiseaux présents sur la zone d'étude et à leurs habitats : sites de reproduction (mares, étangs…), d’hivernage et à leurs axes de migration…

Ce jeu restitue les données de présence collectées précisément géo-référencées (points) durant la phase d'étude. Quelques données bibliographiques complémentaires ont été associées à ce jeu de données.
La majorité des observations concerne les années 2010 et 2011.
DOI: 10.15468/dl.we95eg
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (function (name, pos = -1, envir = as.environment(pos), all.names = FALSE, pattern, sorted = TRUE) \n{\n if (!missing(name)) {\n pos &lt;- tryCatch(name, error = function(e) e)\n if (inherits(pos, \"error\")) {\n name &lt;- substitute(name)\n if (!is.character(name)) \n name &lt;- deparse(name)\n warning(gettextf(\"%s converted to character string\", sQuote(name)), domain = NA)\n pos &lt;- name\n }\n }\n all.names &lt;- .Internal(ls(envir, all.names, sorted))\n if (!missing(pattern)) {\n if ((ll &lt;- length(grep(\"[\", pattern, fixed = TRUE))) && ll != length(grep(\"]\", pattern, fixed = TRUE))) {\n if (pattern == \"[\") {\n pattern &lt;- \"\\\\[\"\n warning(\"replaced regular expression pattern '[' by '\\\\\\\\['\")\n }\n else if (length(grep(\"[^\\\\\\\\]\\\\[&lt;-\", pattern))) {\n pattern &lt;- sub(\"\\\\[&lt;-\", \"\\\\\\\\\\\\[&lt;-\", pattern)\n warning(\"replaced '[&lt;-' by '\\\\\\\\[&lt;-' in regular expression pattern\")\n }\n }\n grep(pattern, all.names, value = TRUE)\n }\n else all.names\n}, Brontispa longissima, Bursaphelenchus xylophilus, Callosobruchus maculatus)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043763-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17645054
title: PCA-MR: A powerful and pleiotropy-resistant framework for causal gene inference with correlated instruments
DOI: 10.15468/meh5st
title: Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Alouette des champs 2004 - 2008 Coordonnées GPS Lambert 93

description: Aire de reproduction de l'espèce Alouette des champs fondée sur la présence de mâles chanteurs au printemps (avril – juin), à partir de points d’écoutes répartis le long d’itinéraires échantillons. Environ 5 000 points ont été visités chaque année entre 2004 et 2008
DOI: 10.15468/dl.kzptd5
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.5188 25.19913, -110.3688 25.19913, -110.3688 25.34913, -110.5188 25.34913, -110.5188 25.19913))"
 ]
}

 The dataset includes 21 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043765-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3dkey3
title: Occurrence Download

description: A dataset containing 49521 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prunus virginiana",
 "HasCoordinate is true"
 ]
}

 The dataset includes 49521 records from 403 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043764-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17644067
title: Simulation input files for "TMEM63 proteins act as mechanically activated cholesterol modulated lipid scramblases contributing to membrane mechano-resilience"

description: This repository contains input files used for running the coarse-grained molecualr dynamics (CGMD) and all-atom molecualr dynamics (AAMD) simulations described in the paper "TMEM63 proteins act as mechanically activated cholesterol modulated lipid scramblases contributing to membrane mechano-resilience" by Yiechang Lin et al.The data is stored in seperate zip files describing the protein structures, CGMD inputs and AAMD inputs.Deatls of the methods are contained in the manuscript
DOI: 10.5281/zenodo.17644066
title: Simulation input files for "TMEM63 proteins act as mechanically activated cholesterol modulated lipid scramblases contributing to membrane mechano-resilience"

description: This repository contains input files used for running the coarse-grained molecualr dynamics (CGMD) and all-atom molecualr dynamics (AAMD) simulations described in the paper "TMEM63 proteins act as mechanically activated cholesterol modulated lipid scramblases contributing to membrane mechano-resilience" by Yiechang Lin et al.The data is stored in seperate zip files describing the protein structures, CGMD inputs and AAMD inputs.Deatls of the methods are contained in the manuscript
DOI: 10.15468/f2nlrv
title: Réseau Loup - Lynx ONCFS - Lynx 2000 présence Occasionnelle Mailles 10km Réseau Loup-Lynx ONCFS

description: Cartographie de synthèse de la présence détectée du lynx en France métropolitaine par un réseau de correspondants départementaux multipartenaire, formé et piloté par l'ONCFS sur le plan scientifique et technique et géré administrativement au niveau local par les DDT. Ce jeu de donnée ventile la présence de l'espèce en maille européenne 10 km (LAEA) de présence dite occasionnelle vs régulière de l'espèce, sur la base de la récurrence spatiale et la quantité d'indices ou constats d'attaques validés au cours de l'a dernière biennale chevauchante (ex: données recueillies entre le 01/04/2012 et le 31/03/2015 pour l'exercice 2015). Les cartographies correspondant aux mailles européennes peuvent être trouvées sur le site de l'ONCFS http://www.oncfs.gouv.fr/Cartographie-ru4/Le-portail-cartographique-de-donnees-ar291
DOI: 10.6084/m9.figshare.30652478
title: <b>C</b><b>ommunity connectivity</b><b> and</b><b> potential</b><b> function</b><b>s</b><b> of</b><b> </b><b>viru</b><b>s</b><b>es</b><b> </b><b>along the particle size spectrum</b><b> </b><b>in</b><b> the twilight zone</b>

description: Viruses are the most abundant biological entities that play essential roles in the biogeochemical cycling in ocean. However, their composition, function and connectivity associated with sinking particles in the twilight zone remain poorly understood. We recovered a total of 5,016 viral OTUs from multiple particle sizes at different depths across three regions, which exhibited high novelty and diversity. Surface small particles harboured more lytic viruses, while deeper large particles hosted more temperate viruses and unclassified taxa. Over 1,000 vOTUs were linked to prokaryotic hosts, mainly Proteobacteria. Metabolic annotation identified 178 auxiliary metabolic genes (AMGs)and 12 carbohydrate-active enzymes families, primarily in temperate Caudoviricetes, providingfunctional complementation in virus-host interactions. Extensive co-occurrence of vOTUs across water layers was revealed, with surface-originated viruses being transported via particles to the twilight zone and beyond. These findings provide new insights into the roles of viruses in carbon cycling and vertical connectivity in the ocean.
DOI: 10.6084/m9.figshare.30652478.v1
title: <b>C</b><b>ommunity connectivity</b><b> and</b><b> potential</b><b> function</b><b>s</b><b> of</b><b> </b><b>viru</b><b>s</b><b>es</b><b> </b><b>along the particle size spectrum</b><b> </b><b>in</b><b> the twilight zone</b>

description: Viruses are the most abundant biological entities that play essential roles in the biogeochemical cycling in ocean. However, their composition, function and connectivity associated with sinking particles in the twilight zone remain poorly understood. We recovered a total of 5,016 viral OTUs from multiple particle sizes at different depths across three regions, which exhibited high novelty and diversity. Surface small particles harboured more lytic viruses, while deeper large particles hosted more temperate viruses and unclassified taxa. Over 1,000 vOTUs were linked to prokaryotic hosts, mainly Proteobacteria. Metabolic annotation identified 178 auxiliary metabolic genes (AMGs)and 12 carbohydrate-active enzymes families, primarily in temperate Caudoviricetes, providingfunctional complementation in virus-host interactions. Extensive co-occurrence of vOTUs across water layers was revealed, with surface-originated viruses being transported via particles to the twilight zone and beyond. These findings provide new insights into the roles of viruses in carbon cycling and vertical connectivity in the ocean.
DOI: 10.15468/dei2ml
title: Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Geai des chênes 2006 - 2010 Coordonnées GPS Lambert 93

description: Aire de reproduction de l'espèce Geai des chênes fondée sur la présence de mâles chanteurs au printemps (avril – juin), à partir de points d’écoutes répartis le long d’itinéraires échantillons. Environ 5 000 points ont été visités chaque année entre 2006 et 2010
DOI: 10.15468/dl.4rvq27
title: Occurrence Download

description: A dataset containing 15583 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Squamata, Testudines, Crocodylia)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 "Year is greater than or equal to 1970",
 "CoordinateUncertaintyInMeters is less than 3000"
 ]
}

 The dataset includes 15583 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043766-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/6klyyk
title: Données d'observation flore du réseau des CBN issues du système d'information de la FCBN

description: Dès la création de leur Fédération (FCBN - www.fcbn.fr) en 1999, les onze Conservatoires botaniques nationaux (CBN) ont exprimé la volonté collective de constituer un système d’information national pour mettre en commun leurs données, et celles de leurs partenaires, sur la flore, la fonge et les végétations-habitats. C’est réellement en 2010 avec le lancement de l’établissement du Format Standard de Données sur la flore (FSD Flore), conçu comme le « format commun de données de la Fédération des CBN », que la démarche a été initiée. Il s’en est suivi de nombreux échanges ayant permis de finaliser le format, de le tester sur les premiers jeux de données, d’établir une charte d’adhésion au projet et d’élaborer le cadrage final de l’exercice d’agrégation des données. Le projet s’est concrétisé au premier trimestre 2013 à travers la mise au format des données détenues par les CBN et leur intégration dans le Système d’Information de la FCBN (SI-FCBN). A l’horizon de l’année 2014, il résulte, de ce projet structurant, que la FCBN dispose d’un système d’information d’envergure nationale et fort de plus de 20 millions de données d��observation sur la flore de France. Le projet a ainsi permis de capitaliser la majeure partie des connaissances sur la distribution de la flore à l’échelle du territoire métropolitain et de La Réunion. Ce produit est le fruit d’un travail de longue haleine mené par les CBN et leurs partenaires, pour certains depuis plus de vingt ans. Il repose en grande partie sur des inventaires réalisés sur le terrain, mais aussi sur des dépouillements puis saisies de la bibliographie et de données d’herbiers. Il met également en jeu toute la richesse du travail poussé d’expertise scientifique et technique mené en continu par le réseau des CBN et qui est axé d’une part sur la validation taxonomique des données, et d’autre part sur leur gestion et administration au sein de bases de données régionales.

Ce jeux contient les données pour les taxons ayant subit des modifications du référentiel Taxref entre la V5 et la V8.
DOI: 10.15468/dl.89ge2y
title: Occurrence Download

description: A dataset containing 51425 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Potentilla norvegica",
 "HasCoordinate is true"
 ]
}

 The dataset includes 51425 records from 465 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043728-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pr9tpb
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.3688 25.19913, -110.2188 25.19913, -110.2188 25.34913, -110.3688 25.34913, -110.3688 25.19913))"
 ]
}

 The dataset includes 101 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043767-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/otdmhh
title: ONCFS Réseau Ours brun - Ours 2007 présence Occasionnelle Mailles 10km LAEA Réseau Ours brun ONCFS

description: Le réseau Ours Brun constitue un outil de suivi scientifique à grande échelle de la population d’ours pyrénéenne. Le Réseau Ours Brun constitue un réseau d’observateurs multi-partenaires susceptibles de recueillir des indices de présence de l’espèce sur l’ensemble de l’aire de répartition qui couvre plusieurs milliers de kilomètres carrés.
DOI: 10.15468/dl.xd7v2z
title: Occurrence Download

description: A dataset containing 5936 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sardinella gibbosa"
 ]
}

 The dataset includes 5936 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043769-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/cytx0s
title: Enquête sur l'écureuil roux, Sciurus vulgaris (2005-2011)-Enquête nationale participative sur l'écureuil roux

description: Cette enquête a débuté en mars 2012 par l'appel à observations public lancé par le MNHN sur son site dédié aux écureuils. L'enquête est toujours en cours et totalisait 4222 observations de particuliers au 1er avril 2014.
DOI: 10.6084/m9.figshare.30652522
title: Prevalence of Vision Impairment in South-East Asia and Oceania in 2020 Magnitude and Temporal Trends

description: To determine the prevalence and trends in vision impairment in South-East Asia and Oceania over the past 30 years. We conducted a systematic review of medical literature and employed hierarchical models to estimate the prevalence of vision impairment (VI) in 2020 in South-East Asia and Oceania in those 50 + years of age. We estimated the prevalence (with 95% uncertainty intervals [UIs]) of mild VI (presenting visual acuity between ≥6/18 and &lt;6/12), moderate and severe VI (MSVI) (presenting visual acuity less than 6/18 to 3/60), and blindness (presenting visual acuity less than 3/60 or less than 10° visual field around central fixation); we also estimated the prevalence of vision impairment due to uncorrected presbyopia (presenting near vision less than N6 or N8 at 40 cm where best-corrected distance visual acuity is ≥6/12). The prevalence of blindness in men and women in South-East Asia in 2020 was 3.05% (UI 2.58–3.49%) and 4.18% (UI 3.58–4.82%), respectively, with an age-standardised reduction of 32% for both sexes since 1990. The prevalence of MSVI in men and women in South-East Asia was 14.92% (UI 13.59–16.31%) and 15.77% (UI 14.41–17.19%), respectively, with an age-standardised reduction of 6.4% for men and 5.1% for women since 1990. The prevalence of blindness in men and women in Oceania was 1.74% (UI 1.43–2.04%) and 2.22% (1.84–2.61%), respectively, with an age-standardised reduction of 18% for both sexes. The prevalence of MSVI in men and women in Oceania in 2020 was 16.77% (14.78–18.79%) and 17.78% (15.82–19.92%), respectively, with an age-standardised reduction of 5.4% for men and 7.2% for women since 1990. Although there has been a significant reduction in the prevalence of blindness in both South-East Asia and Oceania since 1990, the rates of mild to moderate visual impairment have only seen modest reductions. Furthermore, the absolute number blind in these regions increased from approximately 4.1 million in 1990 to 6.0 million in 2020.
DOI: 10.6084/m9.figshare.30652522.v1
title: Prevalence of Vision Impairment in South-East Asia and Oceania in 2020 Magnitude and Temporal Trends

description: To determine the prevalence and trends in vision impairment in South-East Asia and Oceania over the past 30 years. We conducted a systematic review of medical literature and employed hierarchical models to estimate the prevalence of vision impairment (VI) in 2020 in South-East Asia and Oceania in those 50 + years of age. We estimated the prevalence (with 95% uncertainty intervals [UIs]) of mild VI (presenting visual acuity between ≥6/18 and &lt;6/12), moderate and severe VI (MSVI) (presenting visual acuity less than 6/18 to 3/60), and blindness (presenting visual acuity less than 3/60 or less than 10° visual field around central fixation); we also estimated the prevalence of vision impairment due to uncorrected presbyopia (presenting near vision less than N6 or N8 at 40 cm where best-corrected distance visual acuity is ≥6/12). The prevalence of blindness in men and women in South-East Asia in 2020 was 3.05% (UI 2.58–3.49%) and 4.18% (UI 3.58–4.82%), respectively, with an age-standardised reduction of 32% for both sexes since 1990. The prevalence of MSVI in men and women in South-East Asia was 14.92% (UI 13.59–16.31%) and 15.77% (UI 14.41–17.19%), respectively, with an age-standardised reduction of 6.4% for men and 5.1% for women since 1990. The prevalence of blindness in men and women in Oceania was 1.74% (UI 1.43–2.04%) and 2.22% (1.84–2.61%), respectively, with an age-standardised reduction of 18% for both sexes. The prevalence of MSVI in men and women in Oceania in 2020 was 16.77% (14.78–18.79%) and 17.78% (15.82–19.92%), respectively, with an age-standardised reduction of 5.4% for men and 7.2% for women since 1990. Although there has been a significant reduction in the prevalence of blindness in both South-East Asia and Oceania since 1990, the rates of mild to moderate visual impairment have only seen modest reductions. Furthermore, the absolute number blind in these regions increased from approximately 4.1 million in 1990 to 6.0 million in 2020.