cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25664883.v1
title: Supplementary Material for: Two Cases of Increased Gastrointestinal Polyps in Familial Adenomatous Polyposis Following Antiacid Agent Intake

description: Introduction: Familial adenomatous polyposis (FAP), a hereditary disorder of the gastrointestinal tract, is an autosomal dominant inherited condition caused by germline mutations in the adenomatous polyposis coli (APC) gene. It is characterized by the development of hundreds to thousands of colorectal adenomatous polyps, which, if left untreated, can eventually develop into colorectal carcinomas. Representative extracolonic tumors in FAP include multiple duodenal adenomas and desmoid tumors. Moreover, multiple fundic gland polyps are frequently identified in the stomachs of patients with FAP.
Case Presentation: Herein, we report the two cases. A 52-year-old woman who underwent total colectomy for FAP and pancreatoduodenectomy was initiated on esomeprazole for the treatment of anastomotic erosion. Esophagogastroduodenoscopy performed 42 months later showed an increased number and size of gastric fundic gland polyps, which subsequently decreased after replacing esomeprazole with ranitidine. Similarly, a 39-year-old woman with FAP was initiated on vonoprazan for the treatment of reflux symptoms. Esophagogastroduodenoscopy and colonoscopy performed 14 months later indicated an increase in the number of gastric fundic gland polyps and colorectal polyps, which subsequently decreased after vonoprazan discontinuation. In these two cases, the increase and decrease in the number and size of fundic gland polyps and colon adenoma were associated with serum gastrin levels.
Conclusion: Gastric fundic gland polyps and colon polyps may rapidly increase in number and size due to increased gastrin levels induced by proton pump inhibitor/potassium-competitive acid blocker use. Hence, these drugs should be prescribed with caution.
DOI: 10.6084/m9.figshare.27138726.v1
title: Native woody species depend on the soil microbiome to establish on burned soils, while non-native do not

description: To assess the restoration of plant-microbiome interactions in ecosystems impacted by fire, we executed a series of controlled greenhouse experiments that emulated the conditions of wildfire on soils extracted from the Maulino Coastal Forest in central Chile—recognized as a significant biodiversity hotspot. The study focused on six plant species, including three native species: Aristotelia chilensis, Nothofagus glauca, and Nothofagus alessandrii, as well as three non-native species: Eucalyptus globulus, Pinus radiata, and Genista monspessulana. These plants were cultivated in three different soil conditions: unburned soil, burned soil, and burned soil that had been re-inoculated with the native microbiome. Throughout a 90-day period, we meticulously recorded the growth metrics, such as plant height and photosynthesis rates, and assessed the two-year survival probabilities of the planted species to determine the long-term effects of soil conditions on plant survival and health. Further extending the study over 360 days, we measured the concentrations of key soil nutrients—nitrogen (N), phosphorus (P), and potassium (K)—along with the activities of critical microbial enzymes, including dehydrogenase, β-glucosidase, and urease. These metrics provided comprehensive insights into the biochemical and microbial dynamics of soil health and plant-microbiome interactions post-wildfire, contributing valuable information to restoration ecology practices in fire-disturbed landscapes.
DOI: 10.6084/m9.figshare.7734767.v8
title: A multimodal dataset of human gait at different walking speeds established on injury-free adult participants

description: Human motion capture is used in various fields to analyse, understand and reproduce the diversity of movements that are required during daily-life activities. The proposed dataset of human gait has been established on 50 adults injury-free for lower and upper extremities in the most recent six months, with no lower and upper extremity surgery in the last two years. Participants were asked to walk on a straight level walkway at 5 speeds during one unique session: 0–0.4 m.s-1, 0.4–0.8 m.s-1, 0.8–1.2 m.s-1, self-selected spontaneous and fast speeds. Three dimensional trajectories of 52 reflective markers spread over the whole body, 3D ground reaction forces and moment, and electromyographic signals were simultaneously recorded. For each participants, a minimum of 3 trials per condition have been made available in the dataset for a total of 1.145 trials. This dataset could lead to increase the sample size of similar datasets, analyse the effect of walking speed on gait, or conduce unusual analysis of gait thanks to the full body markerset used. <br>
DOI: 10.17632/52xftj3j8t
title: Data for: Quantifying Ca exchange in gypsum using a 45Ca tracer: Implications for interpreting Ca isotopic effects in experimental and natural systems

description: exchange rate data used in Fig 5. All other raw data are presented in table 1.
DOI: 10.17632/jpjn673n6b
title: Doping feruloylated arabinoxylan covalent hydrogels with cellulose nanocrystals

description: data used for a scientif article
DOI: 10.17632/43t5r8m7cs
title: LINF_180012800

description: Zinc finger C2H2-type containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/74f7gnnt5n
title: SPS_Database and Excel files

description: This is an Access database and some Excel files which are supplemental to a paper. The full scan isotope data, the corresponding MS-MS spectra, and the putative identifications were imported into this Access relational database to facilitate sorting, searching, filtering, and querying the results. One worksheet in each Excel files is annotated with color-coded structures.
DOI: 10.17632/yb7m7v8pmf
title: Supplementary Material to 'Risks associated with subtotal cholecystectomy and the factors influencing them: a systematic review and meta-analysis of 85 studies published between 1985 and 2020'

description: This is the supplementary material for the paper titled “Risks associated with subtotal cholecystectomy and the factors influencing them: a systematic review and meta-analysis of 85 studies published between 1985 and 2020”. This review appraises 17 clinical outcomes among 3,645 patients. It shows that there are significant risks of subtotal cholecystectomy-related perioperative morbidity and postoperative interventions that are not comparable to the risks associated with conventional cholecystectomy. It also shows that patients would benefit most from a reconstituting subtotal cholecystectomy using a laparoscopic approach. This supplementary material provides further methodological and analytical details. It contains the Preferred Reporting Items for Systematic Review and Meta-analyses (PRISMA) checklist of items, risk of bias assessment according to Joanne-Biggs Institute criteria, definitions of key terms used in the review, characteristics of the 85 studies included in the systematic review and meta-analyses, patient demographics, indications for subtotal cholecystectomy, surgical characteristics of the included studies, clinical outcomes of subtotal cholecystectomy, outcomes for pooled subgroup analyses by four clinical and two study factors, outcomes for pooled analysis for the type of completion of subtotal cholecystectomy in prospective studies and the list of 85 references for the included studies.
DOI: 10.6084/m9.figshare.27203055.v1
title: <b>Soil moisture influences nectar robbing and plant fitness in a primrose species</b>

description: 1. Low soil moisture, a prominent indicator of a changing climate, has overarching impacts on plant reproduction both directly and indirectly by affecting the visitation rate of pollinators. However, the role of soil moisture in modifying the behaviors of species interacting with plants is less well explored, as are the mechanisms associated with those changes in behavior. If species behavior changes from mutualistic to antagonistic, low soil moisture has the potential to disrupt mutualisms, with plant fitness consequences.2. We investigated the effects and underlying mechanisms of soil moisture on the intensity of nectar robbing (a common behavioral interaction between plants and pollinators) in natural populations of <i>Primula florindae</i> on the southeast Tibetan Plateau. To understand the relationships between soil moisture and nectar robbing and the mechanisms involved, we explored within-population variation in nectar robbing, floral and nectar traits, and the diversity and evenness of the co-flowering plant community in areas with natural variation in soil moisture. We then used an experimental approach to test how nectar robbing affected male and female components of <i>P. florindae</i> reproduction.3. We found that plants growing in low moisture soil experienced higher nectar robbing. Low soil moisture was associated with reduced flower size, nectar production, and the diversity of nectariferous plants. However, the Partial Least Squares Path Model revealed that only flower size (an estimate of nectar accessibility) had a significant effect on intensity of nectar robbing, with low soil moisture triggering a morphological mismatch between flowers and the primary pollinators bumblebees, prompting them to shift to nectar robbing behaviors. Nectar robbing reduced all components of male and female plant reproduction explored by up to 45%.4. <i>Synthesis</i>: This study provides new insight into how soil moisture influences plant-animal interactions, changing the behavior of floral visitors from mutualism to antagonism, and highlights that future soil water availability caused by global climate change may not only directly affect plants but also indirectly affect plants through changes in species interactions.
DOI: 10.6084/m9.figshare.3362122.v1
title: Muriuki et al 2016- malaria regression model data.xlsx

description: 1. Muriuki et al 2016- malaria regression model data: this dataset contains data used to run the multivariable regression model used to write the paper "<b>A comparison of malaria risk, control and management strategies in irrigated and non-irrigated areas in northeastern Kenya"</b>2. Muriuki et al 2016- malaria community practices data: contains data used to describe the community practices in relation to control and management of malaria in the paper "<b>A comparison of malaria risk, control and management strategies in irrigated and non-irrigated areas in northeastern Kenya"</b>
DOI: 10.17632/6zsw3t8tgt
title: Team Status Perceptions Differences and Team Creativity: The Moderating Role of Empathy Expression

description: This data set includes measurement items for team status perception differences, empathy expression, information elaboration, and team creativity, as well as measurement results for 345 members across 76 teams. Team creativity is assessed by leaders, while the other constructs are assessed by the respective members using a 7-point Likert scale, where "1" to "7" represent degrees from "completely disagree" to "completely agree".
DOI: 10.6084/m9.figshare.23007362.v1
title: Fatigue database of complex metallic alloys

description: Metallic glasses and multi-principal element alloys are two representative groups of alloys with high complexity in chemical compositions and atomic-level structures. Their development offers new solutions to tackle engineering problems of materials such as the strength-toughness conflict and deployment in harsh environments and/or for long-term service. The past few decades have witnessed rapid progresses in the research and development of these alloys, with the space of material design much explored and the overall performance significantly elevated. A fatigue database (FatigueData-CMA2022) is compiled from the literature by the end of 2022. Data for both metallic glasses and multi-principal element alloys are included and analyzed for their statistics and patterns. Automatic extraction and manual examination are combined in the workflow to improve the efficiency of processing, the quality of published data, and the reusability. The database contains 272 fatigue datasets of <em>S</em>-<em>N</em> (the stress-life relation), <em>e</em>-<em>N</em> (the strain-life relation), and d<em>a</em>/d<em>N</em>-delta <em>K</em> (the relation between the fatigue crack growth rate and the stress intensity factor range) data, together with the information of materials, processing and testing conditions, and static mechanical properties. The database is designed in a format that can be continuously expanded and updated. Consistent data models are provided to derive fatigue strengths from the <em>S</em>-<em>N</em> data, which allow follow-up data mining and optimization for the composition-processing-microstructure-performance relationships. The database and scripts are released in open repositories.
DOI: 10.6084/m9.figshare.26528119.v1
title: P. keilini transcriptome

description: This dataset contains:21,300 unclustered eukaryotic proteins of <i>P. keilini</i>19,221 transcripts from the 21,300 proteins18,851 clustred proteins out of the 21,300 total proteins,clustered with CD-HIT with identity threshold of 10012,811 proteins (12,712 eggNOG annotated + 99 blastKOALA first-hit annotated)15 key hydrogenosomal proteins identified in P. keiliniProtein involved in <i>P. keilini</i> hydrogenosomal preprotein import system
DOI: 10.6084/m9.figshare.28208684.v1
title: <b>E</b><b>ffect of Particle Size on Stick-Slip </b><b>Dynamics </b><b>of Shear Bands </b><b>Considering Randomness of Initial Particle Positions in Discrete Element Modeling</b>

description: This is the graphical database for the paper 'Effect of Particle Size on Stick-Slip Dynamics of Shear Bands Considering Randomness of Initial Particle Positions in Discrete Element Modeling.' Please ensure to cite this database if you use it in your work.
DOI: 10.6084/m9.figshare.7358213.v1
title: Bathymetry of the Mariana Trench, depths for the 25 cross-profiles

description: Generated from the bathymetric profiles from the vector .shp layer in QGIS 3.0. Each profile has length of 1000 km, the distance between each two is 100 km.
DOI: 10.17632/68b3pfz78j
title: LEAN IMPLEMENTATION AND ORGANIZATIONAL EFFICIENCY: A REVIEW OF LEAN PRACTICES IN HEALTHCARE, BANKING, AND MANUFACTURING SECTORS IN CALIFORNIA, USA

description: Niche drive in California's healthcare, banking, and manufacturing sectors are affected by contingency situations which creates uncertainty on the relevance of lean strategy for organizational survival and development. This study examines the need for value stream mapping, inventory control, and continuous improvement practices as enablers of organizational efficiency in the sectors. The Theory of Constraint (TOC) affirmed the need to effectively manage constraints to improve profits in the sectors. A qualitative research method was adopted to elicit appropriate information on lean implementation. The outcome of the survey revealed that in the healthcare sector, the success of lean implementation is driven by low cost and lead time, identification of non-value-adding activities, restructuring of business processes, automation reordering and data gathering, digital-based inventory, right leadership, training, and supportive coaching. In the banking sector, the success of lean implementation is driven by organizational structure, self-service banking, cloud technology capability, bank-integrated inventory, real-time inventory monitoring, inventory financing, shift in the mindset of the employee, and employee involvement. In the manufacturing sector, the success of implementation is driven by state-of-the-art technology, identification of inefficiencies, lean manufacturing process, work-in-progress, digital technology, employee empowerment, and transparency. The study concluded that collaborative goal attainment for organizational efficiency required effective management of constraints in materials, finance, and capacity. It recommended that organizational leaders in healthcare should prioritize improvement by adopting different methodologies and techniques to enhance competitive performance capacity. The commitment to lean practice in the banking sector should be to streamline work processes and improve the satisfaction of customers. The leaders in manufacturing industry are recommended to commit to maximizing the availability of resources with efficient use of materials at the right time.
DOI: 10.17632/9b7t38tkfx
title: Maternal marital status and the Sex Ratio at Birth in 19th-century Poznań

description: This research was funded by the state budget under the program of the Minister of Education and Science called "Science for Society", No. NdS/529068/2021/2021. 
Paper produced based on the data is now under review.
DOI: 10.4225/49/5a2a11fa43fe3
title: comBat_corrected_Foroutan_et_al_2017

description: Methods used to correct the combined data for batch effects and the original datasets are described in the paper by Foroutan <i>et al.</i> (2017) <i>Molecular Cancer Research.</i><br>PMID: 28119430DOI: 10.1158/1541-7786.MCR-16-0313
DOI: 10.17632/74vbsz24y4
title: EFFECT OF PHYSIOTHERAPY INTERVENTION IN IMPROVING REACTION TIME ON RECREATIONAL BADMINTON PLAYERS

description: Reaction Time (RT) is one of the apropos variable in the areas of instance for sports, academics, and various other tasks in daily living. Reaction time is the interval between the presentation of the stimulus and initiation of the response and it is also considered as a good measure which assess the capacity of cognitive system to process the information. Badminton is categorized as one of the ballistic intermittent sport in which duration of match last up to forty minute to one hour, and a temporal structure is distinguish by a short duration efforts and high intensity. Professional players  shows the accuracy between the badminton practitioners, cognitive decision making tasks and being multitasker at a single time while in the recreational players the average RT is recorded more than the professional players and founded less accuracy of different categories among badminton players, amateur players have low decision making task and have judgement accuracy less than the professional players.
DOI: 10.6084/m9.figshare.22231618.v2
title: kesehatan mental.xlsx

description: <strong>Mental Well-Being and Attendance among Nursing Students</strong>
DOI: 10.6084/m9.figshare.27044530.v1
title: Supplementary Material for: The RNA from Pseudomonas aeruginosa reduces neutrophil responses favoring bacterial survival

description: Introduction: Epithelial and endothelial cells modulate innate immune responses in the lung, including the arrival of neutrophils (PMN), which are crucial cells for the antibacterial host defense. Cells are exposed to prokaryotic RNA (pRNA) during bacterial infections and different pRNA may promote or attenuate the inflammatory response on different immune cells. Pseudomonas aeruginosa (PAE) can cause severe pneumonia and has several immune-evading mechanisms. The aim of this study was to determine the effects of the RNA from PAE (RNAPAE) on lung epithelial, endothelial cells, and PMN, and its impact on bacterial elimination. Methods: Purified total RNAPAE was used as a stimulus on a human lung epithelial cell line (Calu-6), human microvascular endothelial cell line HMEC-1 and isolated healthy human PMN. Activation and cytokine secretion were evaluated. In addition, PMN elimination of live ECO or PAE was determined in the presence of RNAPAE. Results: We found that RNAPAE either induced a pro-inflammatory response on Calu-6 and HMEC-1 or PMN. Pre-stimulation of PMN with RNAPAE diminished activation and chemotaxis induced by live bacteria. Moreover, we found that RNAPAE reduced phagocytosis of live ECO. Finally, we also found that non-degraded fragments of small RNA (&lt;200 bp) were responsible for the PMN microbicidal attenuation during PAE elimination. Conclusion: Our results indicated that short fragments of RNAPAE diminished the immune response of PMN favoring bacterial survival.
DOI: 10.6084/m9.figshare.27617781.v1
title: Xenacoelomorpha phototransduction

description: Annotation of phototransduction-related genes in all genomic data available for Xenacoelomorpha. The following KEGG pathways were searched: "Phototransduction" (map04744), "Phototransduction - fly" (map04745), "Retinol metabolism" (map00830), and "Calcium signaling pathway" (map04020).
DOI: 10.6084/m9.figshare.28444457.v1
title: Canopy nitrogen addition enhances fine root decomposition in a temperate forest: implications for soil carbon sink

description: Fine roots, comprising ~1/3 of terrestrial net primary production, are critical for ecosystem C cycling, yet the influence of atmospheric nitrogen (N) deposition on their decomposition, especially in forests, remains poorly understood. To determine how N deposition via canopy interception affects fine root decomposition, we conducted an eight-year field experiment comparing canopy N addition (CAN) with understory N addition (UAN) at 0, 25, and 50 kg N ha–1 yr–1 in a temperate deciduous forest.<br>
DOI: 10.6084/m9.figshare.5203798.v1
title: Supplementary Material for: Cerebral and Renal Oxygen Saturation Are Not Compromised in the Presence of Retrograde Blood Flow in either the Ascending or Descending Aorta in Term or Near-Term Infants with Left-Sided Obstructive Lesions

description: <b><i>Background:</i></b> In infants with left-sided obstructive lesions (LSOL), the presence of retrograde blood flow in either the ascending or descending aorta may lead to diminished cerebral and renal blood flow, respectively. <b><i>Objectives:</i></b> Our aim was to compare cerebral and renal tissue oxygen saturation (rSO<sub>2</sub>) between infants with LSOL with antegrade and retrograde blood flow in the ascending aorta and with and without diastolic backflow in the descending aorta. <b><i>Methods:</i></b> Based on 2 echocardiograms, the study group was categorized according to the direction of blood flow in the ascending and descending aorta. We measured cerebral and renal rSO<sub>2</sub> using near-infrared spectroscopy and calculated fractional tissue oxygen extraction (FTOE). <b><i>Results:</i></b> Nineteen infants with LSOL, admitted to the NICU between 0 and 28 days after birth, were included. Infants with antegrade blood flow (<i>n </i>= 12) and infants with retrograde blood flow in the ascending aorta (<i>n</i> = 7) had similar cerebral rSO<sub>2</sub> and FTOE during both echocardiograms. Only during the first echocardiogram, infants with retrograde blood flow in the ascending aorta had lower renal FTOE (0.14 vs. 0.32,<i> p</i> = 0.04) and tended to have higher renal rSO<sub>2</sub> (80 vs. 65%,<i> p</i> = 0.09). The presence of diastolic backflow in the descending aorta was not associated with cerebral or renal rSO<sub>2</sub> and FTOE during the first (<i>n</i> = 8) as well as the second echocardiogram (<i>n</i> = 10). <b><i>Conclusions:</i></b> Retrograde blood flow in the ascending aorta was not associated with cerebral oxygenation, while diastolic backflow in the descending aorta was not associated with renal oxygenation in infants with LSOL.
DOI: 10.17632/jvpgmxs3n6
title: Supplemental material for: "A genome-wide association meta-analysis links hidradenitis suppurativa to common and rare sequence variants causing disruption of the Notch and Wnt/β-catenin signaling pathways"

description: Supplemental material for the manuscript "A genome-wide association meta-analysis links hidradenitis suppurativa to common and rare sequence variants causing disruption of the Notch and Wnt/β-catenin signaling pathways"
DOI: 10.17632/tv4r5dp5rc
title: Development of psoriasis during treatment with dupilumab: A systematic review Supplemental Table I

description: Supplemental Table I