cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2pcbn2
title: CCDC 2483554: Experimental Crystal Structure Determination

description: Related Article: Ze Li, Jianhui Wang|2026|Eur.J.Org.Chem.|29|e202500920|doi:10.1002/ejoc.202500920
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5061/dryad.51sm0
title: Data from: A comparison of individual-based genetic distance metrics for landscape genetics

description: A major aim of landscape genetics is to understand how landscapes resist
 gene flow and thereby influence population genetic structure. An empirical
 understanding of this process provides a wealth of information that can be
 used to guide conservation and management of species in fragmented
 landscapes, and also to predict how landscape change may affect population
 viability. Statistical approaches to infer the true model among competing
 alternatives are based on the strength of the relationship between
 pairwise genetic distances and landscape distances among sampled
 individuals in a population. A variety of methods have been devised to
 quantify individual genetic distances, but no study has yet compared their
 relative performance when used for model selection in landscape genetics.
 In this study, we used population genetic simulations to assess the
 accuracy of 16 individual-based genetic distance metrics under varying
 sample sizes and degree of population genetic structure. We found most
 metrics performed well when sample size and genetic structure was high.
 However, it was much more challenging to infer the true model when sample
 size and genetic structure was low. Under these conditions, we found
 genetic distance metrics based on principal components analysis were the
 most accurate (though several other metrics performed similarly), but only
 when they were derived from multiple principal component axes (the optimal
 number varied depending on the degree of population genetic structure).
 Our results provide guidance for which genetic distance metrics maximize
 model selection accuracy and thereby better inform conservation and
 management decisions based upon landscape genetic analysis.
description: Data from: A comparison
 of individual-based genetic distance metrics for landscape
 geneticsFiles include CDPOP
 inputs and outputs, R code for evaluating genetic distance metrics using
 CDPOP simulations, pairwise genetic and landscape distance matrices for
 all individuals in each simulation scenario, and resistance surfaces used
 to control mating and dispersal probabilities in the
 simulations.Shirk_et_al_MER_2017.zip
DOI: 10.5517/ccdc.csd.cc2pd037
title: CCDC 2484188: Experimental Crystal Structure Determination

description: Related Article: Tanawat Phumjan, Kasam Poonswat, Chatphorn Theppitak, Paratchata Batsomboon, Somsak Ruchirawat, Poonsakdi Ploypradith|2026|Chem.Asian J.|21|e70489|doi:10.1002/asia.70489
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pd6jv
title: CCDC 2484387: Experimental Crystal Structure Determination

description: Related Article: Tanawat Phumjan, Kasam Poonswat, Chatphorn Theppitak, Paratchata Batsomboon, Somsak Ruchirawat, Poonsakdi Ploypradith|2026|Chem.Asian J.|21|e70489|doi:10.1002/asia.70489
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pd6lx
title: CCDC 2484389: Experimental Crystal Structure Determination

description: Related Article: Tanawat Phumjan, Kasam Poonswat, Chatphorn Theppitak, Paratchata Batsomboon, Somsak Ruchirawat, Poonsakdi Ploypradith|2026|Chem.Asian J.|21|e70489|doi:10.1002/asia.70489
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pd6nz
title: CCDC 2484391: Experimental Crystal Structure Determination

description: Related Article: Tanawat Phumjan, Kasam Poonswat, Chatphorn Theppitak, Paratchata Batsomboon, Somsak Ruchirawat, Poonsakdi Ploypradith|2026|Chem.Asian J.|21|e70489|doi:10.1002/asia.70489
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pd6q1
title: CCDC 2484393: Experimental Crystal Structure Determination

description: Related Article: Tanawat Phumjan, Kasam Poonswat, Chatphorn Theppitak, Paratchata Batsomboon, Somsak Ruchirawat, Poonsakdi Ploypradith|2026|Chem.Asian J.|21|e70489|doi:10.1002/asia.70489
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pn94t
title: CCDC 2492156: Experimental Crystal Structure Determination

description: Related Article: R. Rajkumar, S. Suresh, Ramki Chakaravarthy, D. Pradhabhan, P. Selvaraj, P. Kavitha|2026|J.Mol.Struct.|1358||doi:10.1016/j.molstruc.2026.145356
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ppj75
title: CCDC 2493337: Experimental Crystal Structure Determination

description: Related Article: Yun-hou Huang, Yuan Liu, Yue Huang, Wei-ying Meng, Hong-zu Wei, Chang-chun Wen, Li-min Liu, Yan-cheng Liu|2026|J.Inorg.Biochem.|277||doi:10.1016/j.jinorgbio.2026.113228
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5061/dryad.m7fk370
title: Data from: Exogenous α-synuclein hinders synaptic communication in cultured cortical primary rat neurons

description: Amyloid aggregates of the protein α-synuclein (αS) called Lewy Bodies (LB)
 and Lewy Neurites (LN) are the pathological hallmark of Parkinson's
 disease (PD) and other synucleinopathies. We have previously shown that
 high extracellular αS concentrations can be toxic to cells and that
 neurons take up αS. Here we aimed to get more insight into the toxicity
 mechanism associated with high extracellular αS concentrations (50-100
 μM). High extracellular αS concentrations resulted in a reduction of the
 firing rate of the neuronal network by disrupting synaptic transmission,
 while the neuronal ability to fire action potentials was still intact.
 Furthermore, many cells developed αS deposits larger than 500 nm within
 five days, but otherwise appeared healthy. Synaptic dysfunction clearly
 occurred before the establishment of large intracellular deposits and
 neuronal death, suggesting that an excessive extracellular αS
 concentration caused synaptic failure and which later possibly contributed
 to neuronal death.
description: experiments
 overviewOverview of experiments
 used for figures 3,4,5exp2015-10-15confocal images used for counting inclusion bodiesexp2013-05-06exp2013-05-29exp2013-07-25See experiments overview for detailsexp2013-12-12See experiments overview for detailsexp2014-05-28See experiements overview for detailsexp2014-05-28bSee experiements overview for detailsexp2014-07-07exp2014-07-30exp2014-08-04See experiements overview for detailsexp2015-08-31 BSA TrisSee experiements overview for detailsexp2015-11-16aSee experiements overview for detailsexp2015-11-16bSee experiments overview for detailsexp2016-01-11aSee experiments overview for detailsexp2016-01-11bSee experiments overview for detailsexp2016-01-18aexp2016-01-18bSee experiments overview for detailsexp2016-01-27See experiments overview for detailsexp2016-03-14 BSA Tris aSee experiments overview for detailsexp2016-05-26 BSA TrisSee experiments overview for detailsexp2016-06-27 BSA TrisSee experiments overview for detailsexp2016-03-14 BSA Tris bSee experiments overview for detailsexp2016-03-14 BSA Tris cSee experiments overview for detailsReadXDatMatlab script to read the data. the Script will produce a timestamp (Ts) per fired action potential, a waveshape (Us; 96 data points), and a electrode number from which the event is recorded.
DOI: 10.5061/dryad.77k3k6n
title: Data from: Discovery of a multi-species shark aggregation and parturition area in the Ba Estuary, Fiji Islands

description: Population declines in shark species have been reported on local and
 global scales, with overfishing, habitat destruction and climate change
 posing severe threats. The lack of species-specific baseline data on
 ecology and distribution of many sharks, however, makes conservation
 measures challenging. Here we present a fisheries-independent shark survey
 from the Fiji Islands, where scientific knowledge on locally occurring
 elasmobranchs is largely still lacking despite the location’s role as a
 shark hotspot in the Pacific. Juvenile shark abundance in the fishing
 grounds of the Ba Estuary (north-western Viti Levu) was assessed with a
 gillnet- and longline-based survey from December 2015 to April 2016. A
 total of 103 juvenile sharks identified as blacktip Carcharhinus limbatus
 (n = 57), scalloped hammerhead Sphyrna lewini (n = 35), and great
 hammerhead Sphyrna mokarran (n = 11) sharks were captured, tagged, and
 released. The condition of umbilical scars (68 % open or semi-healed),
 mean sizes of individuals (± SD) (C. limbatus: 66.5 ± 3.8 cm, S. lewini:
 51.8 ± 4.8 cm, S. mokarran 77.4 ± 2.8 cm), and the presence of these
 species over recent years (based on fishermen interviews), suggest that
 the Ba Estuary area is a critical habitat for multiple species that are
 classified as “Near Threatened” or “Endangered”. Specifically, the area
 likely acts as a parturition ground over the studied period, and
 potentially as a subsequent nursery area. We identified subareas of high
 abundance and found that temperature, salinity and depth acted as
 small-scale environmental drivers of shark abundance. The data suggests a
 tendency for species-specific spatial use, both horizontally (i.e. between
 sampling areas) and vertically (i.e. across the water column). These
 results enhance the understanding of shark ecology in Fiji and provide a
 scientific basis for the implementation of local conservation strategies
 that contribute to the protection of these threatened species.
description: Full data for Vierus et
 al. 2018The archive consists of
 a readme.txt and two Excel tables, one of which contains all variables
 associated with gear deployments in the fishery-independent survey (e.g.,
 environmental parameters, captures) and the other one contains all
 variables related to individual sharks that were caught in the survey
 (e.g., total length, sex).Vierus et al. 2018 -
 data.zip
DOI: 10.5061/dryad.nj811
title: Data from: Context-dependent expression of the foraging gene in field colonies of ants: the interacting roles of age, environment and task

description: ￼Task allocation among social insect workers is an ideal framework for
 studying the molecular mechanisms underlying behavioural plasticity
 because workers of similar genotype adopt different behavioural
 phenotypes. Elegant laboratory studies have pioneered this effort, but
 field studies involving the genetic regulation of task allocation are
 rare. Here, we investigate the expression of the foraging gene in
 harvester ant workers from five age- and task-related groups in a natural
 population, and we experimentally test how exposure to light affects
 foraging expression in brood workers and foragers. Results from our field
 study show that the regulation of the foraging gene in harvester ants
 occurs at two time scales: levels of foraging mRNA are associated with
 ontogenetic changes over weeks in worker age, location and task, and there
 are significant daily oscillations in foraging expression in foragers. The
 temporal dissection of foraging expression reveals that gene expression
 changes in foragers occur across a scale of hours and the level of
 expression is predicted by activity rhythms: foragers have high levels of
 foraging mRNA during daylight hours when they are most active outside the
 nests. In the experimental study, we find complex interactions in foraging
 expression between task behaviour and light exposure. Oscillations occur
 in foragers following experimental exposure to 13 L : 11 D (LD)
 conditions, but not in brood workers under similar conditions. No
 significant differences were seen in foraging expression over time in
 either task in 24 h dark (DD) conditions. Interestingly, the expression of
 foraging in both undisturbed field and experimentally treated foragers is
 also significantly correlated with the expression of the circadian clock
 gene, cycle. Our results provide evidence that the regulation of this gene
 is context-dependent and associated with both ontogenetic and daily
 behavioural plasticity in field colonies of harvester ants. Our results
 underscore the importance of assaying temporal patterns in behavioural
 gene expression and suggest that gene regulation is an integral mechanism
 associated with behavioural plasticity in harvester ants.
description: RSPB20160841_Dryad
 DataGene expression values
 for field study and light experiments. Each separate study/analysis is
 presented on new worksheet with appropriate labels. If one has questions
 on data or methods used in this study, please do not hesitate to contact
 me at kingram@colgate.edu.
DOI: 10.5061/dryad.9nm58
title: Data from: Genetic structure and diversity of the endangered fir tree of Lebanon (Abies cilicica Carr.): implications for conservation

description: The threatened conifer Abies cilicica currently persists in Lebanon in
 geographically isolated forest patches. The impact of demographic and
 evolutionary processes on population genetic diversity and structure were
 assessed using 10 nuclear microsatellite loci. All remnant 15 local
 populations revealed a low genetic variation but a high recent effective
 population size. FST-based measures of population genetic differentiation
 revealed a low spatial genetic structure, but Bayesian analysis of
 population structure identified a significant Northeast-Southwest
 population structure. Populations showed significant but weak
 isolation-by-distance, indicating non-equilibrium conditions between
 dispersal and genetic drift. Bayesian assignment tests detected an
 asymmetric Northeast-Southwest migration involving some long-distance
 dispersal events. We suggest that the persistence and Northeast-Southwest
 geographic structure of Abies cilicica in Lebanon is the result of at
 least two demographic processes during its recent evolutionary history:
 (1) recent migration to currently marginal populations and (2) local
 persistence through altitudinal shifts along a mountainous topography.
 These results might help us better understand the mechanisms involved in
 the species response to expected climate change.
description: Genotype dataset for 10
 microsatellite markers for 5 Abies speciesThis dataset describes
 the genotypes detected for 10 nuclear microsatellite markers in 5 Abies
 species in the Mediterranean basin. Species and populations codes are
 those of the corresponding article.database.xlsx
DOI: 10.5061/dryad.mf0ns
title: Data from: A novel integrative method for measuring body condition in ecological studies based on physiological dysregulation

description: 1. The body condition of free-ranging animals affects their response to
 stress, decisions, ability to fulfil vital needs and, ultimately, fitness.
 However, this key attribute in ecology remains difficult to assess, and
 there is a clear need for more integrative measures than the common
 univariate proxies. 2. We propose a systems biology approach that
 positions individuals along a gradient from a ‘normal/optimal’ to
 ‘abnormal/suboptimal’ physiological state based on Mahalanobis distance
 computed from physiological biomarkers. We previously demonstrated the
 validity of this approach for studying ageing in humans; here, we
 illustrate its broad potential for ecological studies. 3. As an example,
 we used biomarker data on shorebirds and found that birds with an abnormal
 condition had a lower maximal thermogenic capacity and higher scores of
 inflammation, with important implications for their ecology and health.
 Moreover, Mahalanobis distance captured a signal of condition not detected
 by the individual biomarkers. 4. Overall, our results on birds and humans
 show that individuals with abnormal physiologies are indeed in worse
 condition. Moreover, our approach appears not to be particularly sensitive
 to which set of biomarkers is used to assess condition. Consequently, it
 could be applied easily to existing ecological data sets. 5. Our approach
 provides a general, powerful way to measure condition that helps resolve
 confusion as to how to deal with complex interactions and interdependence
 among multiple physiological and condition measures. It can be applied
 directly to topics such as the effect of environmental quality on body
 condition, risks of health outcomes, mechanisms of adaptive phenotypic
 plasticity, and mechanisms behind long-term processes such as senescence.
description: Shorebirds physiological
 dataThis datasets contains
 data measured over ~1 on shorebirds (Calidris canutus) caught in the wild
 and kept in captivity. Specifically, the dataset includes 11 physiological
 biomarkers, two mass measurements, one performance measure (maximal
 thermogenic capacity), one health variable (foot inflammation) and
 information about treatment and measurment times for 31 birds. See Milot
 et al (accompagning paper) and references therein (Vézina et al. 2006;
 2011; Buehler et al. 2008) for details about the experimental setup. The
 data is in excel format and ready for input in R. A sheet also describe
 each variable.Milot_et_al2013_MEE_Shorebird_physiological_data.xlsx
DOI: 10.5061/dryad.hs3q65d
title: Data from: Time-dependent decline of body-specific attention to the paretic limb in chronic stroke patients

description: Objective: To examine whether reduced body-specific attention to paretic
 limb is found in chronic stroke patients in the time-dependent manner.
 Methods: Twenty-one patients with chronic hemiparesis (10 left and 11
 right hemiparesis) after subcortical stroke and 18 age-matched healthy
 controls were recruited in this study. Standard neuropsychological
 examinations showed no clear evidence of spatial neglect in all patients.
 In order to quantitatively measure the spatial attention to paretic hand,
 a visual detection task for detecting a target appearing on the surface of
 either a paretic or dummy hand was used. This task can measure the body
 facilitation effect, which makes faster detection of a target on the body
 compared with one far from the body. Results: In stroke patients, there
 was no difference in the reaction time for visual target between on the
 paretic and the dummy hands, while the healthy participants showed faster
 detection for the visual target on the real hand than that on dummy one.
 The Index of the body facilitation effect, subtracting the reaction time
 for the target-on-paretic hand from that for the target-on-dummy one, was
 correlated with the duration since onset and with finger function test on
 the Stroke Impairment Assessment Set. Conclusions: The reduction of the
 body facilitation effect in paretic limb suggests the decline of
 body-specific attention to the paretic one in patients with chronic
 hemiparesis. This decline of the body-specific attention, leading to
 neglect for paretic limb, will be one of the most serious problems for
 rehabilitation based on use-dependent plasticity.
description: Charateristics in
 healthy controls and Reaction time in stroke patients and healthy
 controlsData
 with characteristics in healthy controls and reaction time in stroke
 patients and healthy controls.zip
DOI: 10.5061/dryad.r6b0p
title: Data from: Selective spore germination on shoots of Homalothecium lutescens, a moss with dwarf males

description: Spores from three bryophyte species with dwarf males (Homalothecium
 lutescens, Homalothecium sericeum and Isothecium alopecuroides) were sown
 on shoots of H. lutescens in vitro. After 10 months, presence and
 fertility of dwarf plants were scored. Spores of the more distantly
 related I. alopecuroides were unable to develop into dwarf plants on H.
 lutescens. Spores of both H. lutescens and H. sericeum developed into
 dwarf plants. In fact, dwarf plants of H. sericeum were both more abundant
 and more often fertile than those of H. lutescens. The ability of H.
 sericeum spores to develop into dwarf males on shoots of H. lutescens
 suggests a possible pathway for hybridization between the two species. On
 the other hand, the inability of I. alopecuroides to develop into dwarf
 males on shoots of H. lutescens suggests that regulation of spore
 germination and dwarf male development on host shoots is associated with
 the degree of relatedness between species.
description: Rosengren_Cronberg_Sporegermination