cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/a20191b9e28c0edd1190831af92d6e48
title: Interagency Ecological Program: Over four decades of juvenile fish monitoring data from the San Francisco Estuary, collected by the Delta Juvenile Fish Monitoring Program, 1976-2023

description: The United States Fish and Wildlife Service Delta Juvenile Fish Monitoring Program (DJFMP) has monitored juvenile Chinook Salmon Oncorhynchus tshawytscha and other fish species within the San Francisco Estuary (Estuary) since 1976 using a combination of surface trawls and beach seines. Since 2000, three trawl sites and 58 beach seine sites have been sampled weekly or biweekly within the Estuary and lower Sacramento and San Joaquin Rivers. As part of the Interagency Ecological Program (IEP) that manages the Estuary, the DJFMP has tracked the relative abundance and distribution of naturally and hatchery produced juvenile Chinook Salmon of all races as they outmigrate through the Sacramento-San Joaquin Delta for over four decades. The data that DJFMP collected has been used not only to help inform the management of Chinook Salmon, but also to monitor the status of native species of interest such as the previously listed Sacramento Splittail Pogonichthys macrolepidotus and invasive species such as Mississippi Silverside Menidia audens and Largemouth Bass Micropterus salmoides. DATA CORRECTION/UPDATE: Previous data versions 244.6, 244.7, and 244.8 contained an error and resulted in duplicated records of hatchery Chinook Salmon in the datasets. These datasets were removed from the data repository and the error was corrected in version 244.9 and after. DNA Data: Full more details of the DNA methods and results for juvenile Chinook salmon included in this dataset, please check out Blankenship, S.M., J. Israel, E. Buttermore, and K. Reece. 2021. Knights Landing, California Department of Fish and Wildlife, Genetic Determination of Population of Origin 2017 through 2019 ver 1. Environmental Data Initiative. https://doi.org/10.6073/pasta/85fbc988c0b1362e84c318e69c7a939e. For more information on the Delta Juvenile Fish Monitoring Program: https://www.fws.gov/project/delta-juvenile-fish-monitoring-program
DOI: 10.6084/m9.figshare.23654083
title: Identification of a cancer-associated fibroblast signature for predicting prognosis and immunotherapeutic responses in bladder urothelial carcinoma

description: Cancer-associated fibroblasts (CAFs) are the most important cellular components in bladder urothelial carcinoma (BLCA) and are involved in the development and immunosuppression of BLCA. Therefore, we aimed to construct a CAF-associated signature for predicting the prognosis and immunotherapy response in patients with BLCA. CAF infiltration and stromal score were quantified using two algorithms. Weighted gene co-expression network analysis (WGCNA) was performed to identify the CAF-associated modules and hub genes. Univariate Cox and Least Absolute Shrinkage and Selection Operator regression analyses were used for constructing CAF signatures and calculating CAF scores. The ability of the CAF signature to predict prognosis and response to immunotherapy was validated using the data from three cohorts. WGCNA identified two CAF-associated modules and constructed a CAF signature containing 27 genes. In all three cohorts, patients with high CAF scores had markedly worse prognoses than those with low CAF scores, and CAF scores were independent risk factors. In addition, patients with high CAF scores did not respond to immunotherapy, whereas those with lower CAF scores responded to immunotherapy. CAF signature can be used to predict prognosis and immunotherapy response to guide individualized treatment planning in patients with BLCA.
DOI: 10.6084/m9.figshare.23654083.v1
title: Identification of a cancer-associated fibroblast signature for predicting prognosis and immunotherapeutic responses in bladder urothelial carcinoma

description: Cancer-associated fibroblasts (CAFs) are the most important cellular components in bladder urothelial carcinoma (BLCA) and are involved in the development and immunosuppression of BLCA. Therefore, we aimed to construct a CAF-associated signature for predicting the prognosis and immunotherapy response in patients with BLCA. CAF infiltration and stromal score were quantified using two algorithms. Weighted gene co-expression network analysis (WGCNA) was performed to identify the CAF-associated modules and hub genes. Univariate Cox and Least Absolute Shrinkage and Selection Operator regression analyses were used for constructing CAF signatures and calculating CAF scores. The ability of the CAF signature to predict prognosis and response to immunotherapy was validated using the data from three cohorts. WGCNA identified two CAF-associated modules and constructed a CAF signature containing 27 genes. In all three cohorts, patients with high CAF scores had markedly worse prognoses than those with low CAF scores, and CAF scores were independent risk factors. In addition, patients with high CAF scores did not respond to immunotherapy, whereas those with lower CAF scores responded to immunotherapy. CAF signature can be used to predict prognosis and immunotherapy response to guide individualized treatment planning in patients with BLCA.
DOI: 10.15468/dl.djbxtw
title: Occurrence Download

description: A dataset containing 625 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 {
 "or" : [
 "InstitutionKey is not null",
 "CollectionKey is not null"
 ]
 },
 "BasisOfRecord is one of (Specimen, Fossil, Material sample, Living Specimen, Material citation)"
 ]
 },
 {
 "and" : [
 "GadmGid is one of (VNM.26_1, VNM.26.4_1, VNM.57.6.6_1)",
 "TaxonKey is one of (Polypodiopsida)",
 "InstitutionKey is one of (1be3aa67-8f90-4309-92f4-bd55426a8c09, 6039165f-1334-4ac6-a955-5542100c0e50, 0237598a-853a-492c-af74-a723fe251799, ac8eb8fc-0703-4408-8388-686764b75877, be5b9c72-e499-42b8-a5dc-c27505cf232e, df27e63f-82b2-464e-9286-a96163c961c9, 0e919a55-08d3-4bd2-aec1-200858fafd92, 44e7a331-0270-4c39-ad64-91c0d8416480, ab83e5ab-f4f7-4c9b-a1d5-eb779dfb9377, dd650e9f-2fb6-41c9-9dba-100c23a1393a)"
 ]
 }
 ]
}

 The dataset includes 625 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021284-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.7251023
title: Additional file 1: of Adult height and risk of 50 diseases: a combined epidemiological and genetic analysis

description: Table S1. Case definition and data coverage. Table S6. Pathways identified by height-associated variants. (XLSX 45Â kb)
DOI: 10.6084/m9.figshare.7251023.v1
title: Additional file 1: of Adult height and risk of 50 diseases: a combined epidemiological and genetic analysis

description: Table S1. Case definition and data coverage. Table S6. Pathways identified by height-associated variants. (XLSX 45Â kb)
DOI: 10.7284/130461
title: Anemometer data collected during research cruise SKQ201812T using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7251017
title: Additional file 3: of Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes

description: EBRs detected and genome position in relation to the chicken genome. Data is listed in supplementary tables as follows: Table S7. Ostrich genome; Table S8. Budgerigar genome; Table S9. Saker falcon genome. (ZIP 61 kb)
DOI: 10.7284/130462
title: Anemometer data collected during research cruise SKQ201812T using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Processed data created by vessel technician during a Field_expedition
DOI: 10.6084/m9.figshare.7251014
title: Additional file 1: of Clinical and economical impacts of guideline implementation by the pharmaceutical care unit for high cost medications in a referral teaching hospital

description: Indication checklists for albumin, IVIG, and iv pantoprazole. (ZIP 65 kb)
DOI: 10.6084/m9.figshare.7251017.v1
title: Additional file 3: of Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes

description: EBRs detected and genome position in relation to the chicken genome. Data is listed in supplementary tables as follows: Table S7. Ostrich genome; Table S8. Budgerigar genome; Table S9. Saker falcon genome. (ZIP 61 kb)
DOI: 10.7284/130446
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise SKQ201812T using a Sea-Bird SBE-911+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7251014.v1
title: Additional file 1: of Clinical and economical impacts of guideline implementation by the pharmaceutical care unit for high cost medications in a referral teaching hospital

description: Indication checklists for albumin, IVIG, and iv pantoprazole. (ZIP 65 kb)
DOI: 10.7284/130448
title: Flowmeter data collected during research cruise SKQ201812T using a Omega FP-2541 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7251005
title: Additional file 1: of Efficacy of orthodontic mini implants for en masse retraction in the maxilla: a systematic review and meta-analysis

description: Data extraction template. (CSV 2 kb)
DOI: 10.7284/130449
title: Flowmeter data collected during research cruise SKQ201812T using a Krohne Optiflux 5000 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130451
title: Fluorometer data collected during research cruise SKQ201812T using a Turner Cyclops-7 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7250999
title: Additional file 2: of Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes

description: Chromosomal coordinates and orientation of mapped scaffolds and PCFs are listed by chromosome for each species. Data is listed in supplementary tables as follows: Table S4. Ostrich genome; Table S5. Budgerigar genome; Table S6. Saker falcon genome. (ZIP 87 kb)
DOI: 10.6084/m9.figshare.7250999.v1
title: Additional file 2: of Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes

description: Chromosomal coordinates and orientation of mapped scaffolds and PCFs are listed by chromosome for each species. Data is listed in supplementary tables as follows: Table S4. Ostrich genome; Table S5. Budgerigar genome; Table S6. Saker falcon genome. (ZIP 87 kb)
DOI: 10.7284/130452
title: GNSS (Global Navigation Satellite System) data collected during research cruise SKQ201812T using a C&C C-Nav 3050 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7250990
title: Additional file 1: of Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes

description: Intrachromosomal rearrangements: BAC IDs and chromosomal orientation of clones (with start and stop coordinates from the chicken genome). The order of clones from the top to the bottom represents the order in which that appears on the chromosomes of the species of interest. Text in red indicates the p- (short) arm of the chromosome (where it is discernable). Data is listed in supplementary tables as follows: Table S1. Ostrich genome; Table S2. Budgerigar genome; Table S3. Saker falcon genome. (ZIP 58 kb)
DOI: 10.7284/130447
title: Gravimeter data collected during research cruise SKQ201812T using a Bell BGM-3 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7250990.v1
title: Additional file 1: of Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes

description: Intrachromosomal rearrangements: BAC IDs and chromosomal orientation of clones (with start and stop coordinates from the chicken genome). The order of clones from the top to the bottom represents the order in which that appears on the chromosomes of the species of interest. Text in red indicates the p- (short) arm of the chromosome (where it is discernable). Data is listed in supplementary tables as follows: Table S1. Ostrich genome; Table S2. Budgerigar genome; Table S3. Saker falcon genome. (ZIP 58 kb)
DOI: 10.25375/uct.7250984
title: Pulp and Paper Sub-Sector Energy Demand

description: tch_ind_pp is industrial sub-sector demand side data for the pulp and paper industry.
DOI: 10.7284/130453
title: Gyrocompass data collected during research cruise SKQ201812T using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25375/uct.7250984.v1
title: Pulp and Paper Sub-Sector Energy Demand

description: tch_ind_pp is industrial sub-sector demand side data for the pulp and paper industry.
DOI: 10.7284/130454
title: Gyrocompass data collected during research cruise SKQ201812T using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25375/uct.7250975
title: Iron and Steel Sub-Sector Energy Demand

description: tch_ind_is is industrial sub-sector demand side data for the iron and steel industry.
DOI: 10.25375/uct.7250981
title: Non-metallic Minerals Sub-Sector Energy Demand

description: ch_ind_nm is industrial sub-sector demand side data for the non-metallic minerals industry. This includes: * Biomass Bagasse * Biomass Wood * Coking coal * Coal * South Africa gas * Oil (diesel) * Oil (HFO) * Oil (LPG) * Waste * Others: cements, bricks, ceramics, glass, lime, clinker
DOI: 10.25375/uct.7250981.v1
title: Non-metallic Minerals Sub-Sector Energy Demand

description: ch_ind_nm is industrial sub-sector demand side data for the non-metallic minerals industry. This includes: * Biomass Bagasse * Biomass Wood * Coking coal * Coal * South Africa gas * Oil (diesel) * Oil (HFO) * Oil (LPG) * Waste * Others: cements, bricks, ceramics, glass, lime, clinker
DOI: 10.25375/uct.7250969
title: Industrial Sector Energy Demand

description: TCH_IND is an aggregation of all the other industry sub-sectors, namely (2015 version). MiningIron & SteelChemicalsPrecious & Non-Ferrous MetalsN.M.M. ProductsFood, Beverage, TabaccoPulp & Paper ProductsOther
DOI: 10.25375/uct.7250975.v1
title: Iron and Steel Sub-Sector Energy Demand

description: tch_ind_is is industrial sub-sector demand side data for the iron and steel industry.
DOI: 10.7284/130466
title: INS (Inertial Navigation System) data collected during research cruise SKQ201812T using a Kongsberg Seapath 320+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25375/uct.7250966
title: Transport Sector Energy Demand

description: TCH_TRA is transport sector demand side data from 2015.
DOI: 10.25375/uct.7250969.v1
title: Industrial Sector Energy Demand

description: TCH_IND is an aggregation of all the other industry sub-sectors, namely (2015 version). MiningIron & SteelChemicalsPrecious & Non-Ferrous MetalsN.M.M. ProductsFood, Beverage, TabaccoPulp & Paper ProductsOther
DOI: 10.25375/uct.7250963
title: Residential Sector Energy Demand

description: TCH_RES is the residential sector demand side data from 2015.
DOI: 10.25375/uct.7250966.v1
title: Transport Sector Energy Demand

description: TCH_TRA is transport sector demand side data from 2015.
DOI: 10.7284/130455
title: Meteorological Station data collected during research cruise SKQ201812T using a Vaisala WXT520 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25375/uct.7250960
title: Other Sectors Energy Supply

description: TCH_SUP is an aggregation of other supply side data including the following energy sources: This version is from 2015. refineriesfossil fuels (coal, oil, gas)renewables (biomass, waste, hydro, wind, solar)imported energy
DOI: 10.25375/uct.7250963.v1
title: Residential Sector Energy Demand

description: TCH_RES is the residential sector demand side data from 2015.
DOI: 10.25375/uct.7250957
title: Agriculture Sector Energy Demand

description: TCH_AGR is the agricultural sector demand side data.
DOI: 10.25375/uct.7250957.v1
title: Agriculture Sector Energy Demand

description: TCH_AGR is the agricultural sector demand side data.
DOI: 10.25375/uct.7250960.v1
title: Other Sectors Energy Supply

description: TCH_SUP is an aggregation of other supply side data including the following energy sources: This version is from 2015. refineriesfossil fuels (coal, oil, gas)renewables (biomass, waste, hydro, wind, solar)imported energy
DOI: 10.7284/130456
title: Radiometer data collected during research cruise SKQ201812T using a RMR Co. PRP instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17608/k6.auckland.7250954
title: Chronic high-fat diet exacerbates sexually-dimorphic Pomc tm1/tm1 mouse obesity

description: Supplementary figures for manuscriptSupplementary tables for manuscript
DOI: 10.25375/uct.7250948
title: Demand Projections for Energy Services

description: Demand projections for SATIM.DMD_PRJ contains the useful demand projections for energy services from 2015.
DOI: 10.7284/130457
title: Radiometer data collected during research cruise SKQ201812T using a Biospherical QSR-2150 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17608/k6.auckland.7250954.v1
title: Desacetyl-a-MSH and a-MSH protect female but not male C57BL/6J mice from chronic high-fat diet-induced obesity

description: Supplementary figures for manuscript
DOI: 10.7284/130450
title: Rain Gauge data collected during research cruise SKQ201812T using a RM Young 50202 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25375/uct.7250948.v1
title: Demand Projections for Energy Services

description: Demand projections for SATIM.DMD_PRJ contains the useful demand projections for energy services from 2015.
DOI: 10.25375/uct.7250945
title: Time Slices (Demand Profiles)

description: Hourly demand profiles for all sectors from 2015.
DOI: 10.7284/130459
title: SSV (Sound Speed Velocimeter) data collected during research cruise SKQ201812T using a AML SV Xchange instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25375/uct.7250942
title: Commercial Services Sector Energy Demand

description: TCH_COM is the commercial (services) sector demand side data.From 2014-2015.
DOI: 10.25375/uct.7250945.v1
title: Time Slices (Demand Profiles)

description: Hourly demand profiles for all sectors from 2015.
DOI: 10.17608/k6.auckland.7250954.v2
title: Chronic high-fat diet exacerbates sexually-dimorphic Pomc tm1/tm1 mouse obesity

description: Supplementary figures for manuscript
DOI: 10.25375/uct.7250942.v1
title: Commercial Services Sector Energy Demand

description: TCH_COM is the commercial (services) sector demand side data.From 2014-2015.
DOI: 10.7284/130463
title: Water Temperature data collected during research cruise SKQ201812T using a HEITRONICS CT15.10 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/132158
title: Water Temperature data collected during research cruise SKQ201812T using a Sea-Bird SBE-38 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17608/k6.auckland.7250954.v3
title: Chronic high-fat diet exacerbates sexually-dimorphic Pomc tm1/tm1 mouse obesity

description: Supplementary figures for manuscriptSupplementary tables for manuscript
DOI: 10.17608/k6.auckland.7250954.v5
title: Chronic high-fat diet exacerbates sexually-dimorphic Pomc tm1/tm1 mouse obesity

description: Supplementary figures for manuscriptSupplementary tables for manuscript
DOI: 10.7284/132178
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SKQ201813S using a Hawaii UHDAS instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17608/k6.auckland.7250954.v4
title: Chronic high-fat diet exacerbates sexually-dimorphic Pomc tm1/tm1 mouse obesity

description: Supplementary figures for manuscriptSupplementary tables for manuscript
DOI: 10.7284/132175
title: Anemometer data collected during research cruise SKQ201813S using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7250792
title: NYC Turnstile data

description: Turnstile data collected from NYC’s subway system.
DOI: 10.6084/m9.figshare.7250792.v1
title: NYC Turnstile data

description: Turnstile data collected from NYC’s subway system.
DOI: 10.7284/132176
title: Anemometer data collected during research cruise SKQ201813S using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Processed data created by vessel technician during a Field_expedition
DOI: 10.6084/m9.figshare.7250789
title: NYPD

description: Criminal offenses reported to the New York City Police Department (NYPD).
DOI: 10.6084/m9.figshare.7250789.v1
title: NYPD

description: Criminal offenses reported to the New York City Police Department (NYPD).
DOI: 10.7284/132161
title: Flowmeter data collected during research cruise SKQ201813S using a Omega FP-2541 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/132162
title: Flowmeter data collected during research cruise SKQ201813S using a Krohne Optiflux 5000 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/132164
title: Fluorometer data collected during research cruise SKQ201813S using a Turner Cyclops-7 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/132165
title: GNSS (Global Navigation Satellite System) data collected during research cruise SKQ201813S using a C&C C-Nav 3050 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/132160
title: Gravimeter data collected during research cruise SKQ201813S using a Bell BGM-3 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/132166
title: Gyrocompass data collected during research cruise SKQ201813S using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/132167
title: Gyrocompass data collected during research cruise SKQ201813S using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/132180
title: INS (Inertial Navigation System) data collected during research cruise SKQ201813S using a Kongsberg Seapath 320+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition