cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0207940.10fu
title: SH0207940.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0207941.10fu
title: SH0207941.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0207942.10fu
title: SH0207942.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0207943.10fu
title: SH0207943.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0207944.10fu
title: SH0207944.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.14895876
title: Quality assessment and standards of rejuvenative  Drug Boerhavia    diffusa Linn. (Punarnava) root: An approach to evaluation

description: The herbal medicine has ancient medicinal use in different societies. Boerhavia diffusa Linn. (Nyctaginaceae), is a plant of Rasayana category as per Ayurvedic claims due to its ethno- pharmacological, chemical and therapeutic values. It is commonly known as 'Punarnava' in the Indian system of medicine, is a perennial creeping herb found throughout the waste land of India. It is reported to possess antiaging, disease prevention and life strengthening activities which hold enormous influence in disease burden and affordability/ availability of healthcare in the world. It used in Ayurveda for the treatment of diabetes, digestive system, alleviates fluid retention and very useful in managing heart diseases, anemia, hernia, respiratory distress, liver problems, managing lipids and cholesterol in healthy limits. The present study provides a detailed account on the quality assessment and standards of Boerhavia diffusa Linn. Root. The pharmacognostic evaluation including taxonomy, morphology, microscopic characters, fluorescence analysis, physico-chemical parameter, phytochemical studies, TLC and HPTLC analysis. The information generated by this particular study provides relevant pharmacognostical data needed for proper identification and authentication of Boerhavia diffusa Linn. Root.
DOI: 10.5281/zenodo.14895877
title: Quality assessment and standards of rejuvenative  Drug Boerhavia    diffusa Linn. (Punarnava) root: An approach to evaluation

description: The herbal medicine has ancient medicinal use in different societies. Boerhavia diffusa Linn. (Nyctaginaceae), is a plant of Rasayana category as per Ayurvedic claims due to its ethno- pharmacological, chemical and therapeutic values. It is commonly known as 'Punarnava' in the Indian system of medicine, is a perennial creeping herb found throughout the waste land of India. It is reported to possess antiaging, disease prevention and life strengthening activities which hold enormous influence in disease burden and affordability/ availability of healthcare in the world. It used in Ayurveda for the treatment of diabetes, digestive system, alleviates fluid retention and very useful in managing heart diseases, anemia, hernia, respiratory distress, liver problems, managing lipids and cholesterol in healthy limits. The present study provides a detailed account on the quality assessment and standards of Boerhavia diffusa Linn. Root. The pharmacognostic evaluation including taxonomy, morphology, microscopic characters, fluorescence analysis, physico-chemical parameter, phytochemical studies, TLC and HPTLC analysis. The information generated by this particular study provides relevant pharmacognostical data needed for proper identification and authentication of Boerhavia diffusa Linn. Root.
DOI: 10.5281/zenodo.14344829
title: Datasets used in the application analysis of EpitopeGen

description: cell barcode information was added to the COVID-19 dataset annotation file: obs_annotated_covid19_su_ens_th0.5.csv
DOI: 10.5281/zenodo.14344830
title: Datasets used in the application analysis of EpiGen
DOI: 10.5281/zenodo.14624873
title: Datasets used in the application analysis of EpiGen

description: The COVID-19 database was updated. 

The annotated files for COVID-19 and tumor analyses were updated.
DOI: 10.5281/zenodo.14861398
title: Datasets used in the application analysis of EpiGen

description: The cell ids were added to obs_annotated_cancer_wu_ens_th0.5.csv
DOI: 10.5281/zenodo.14861864
title: Datasets used in the application analysis of EpitopeGen

description: Add sample_tcrs.csv for running tutorial.
DOI: 10.5281/zenodo.14896012
title: Datasets used in the application analysis of EpitopeGen

description: cell barcode information was added to the COVID-19 dataset annotation file: obs_annotated_covid19_su_ens_th0.5.csv
DOI: 10.17172/nomad/2025.02.19-5
title: NOMAD dataset: My_first_dataset
DOI: 10.48514/a6dv-b172
title: FARM Data El Reno 2013 Tornado
DOI: 10.5281/zenodo.14894606
title: Major and trace element compositions of volcanic rocks from the Deloro Assemblage of the Abitibi Greenstone Belt

description: This dataset is the basis of an investigation of the geochemistry and petrogenesis of the Deloro volcanic assemblage of the Abitibi Greenstone Belt, Superior Province, Canada. The dataset was drawn from a geochemical database of nearly 12000 samples of ultramafic to felsic volcanic rocks from the Abitibi Greenstone Belt. This database includes major and trace element analyses from the "Système d'informations géominières" (SIGÉOM) database of the Ministère des Ressources naturelles et des Forêts (Québec), reports of the Geological Survey of Canada and the Ontario Geological Survey, scientific publications, academic theses, and unpublished data. While much of the database was compiled previously (Vite-Sánchez et al., 2024), we have updated it with more recently released data (2021-2023 data from SIGÉOM and 2012-2022 data from the Ontario Geological Survey). 

The Deloro samples were isolated in ArcGIS based on a preliminary version of the Abitibi assemblage map of Jørgensen and Gibson (2024a). The final Deloro dataset presented here includes only mafic to felsic samples. Samples identified as komatiites and komatiitic basalts on the Jensen (1976) ternary diagram or with anomalous geochemical signatures such as very high Fe-Ti on the Jensen (1976) ternary diagram, extremely low Zr/Hf and Nb/Ta ratios, extreme mobilisation of LREE and major element contents indicating very intense alteration were excluded from the dataset. Thus, a total of 2419 samples comprise the “Deloro dataset”.

The data were curated so that all samples contain major element data and trace element data for Ce, Eu, Gd, La, Lu, Nb, Nd, Sm, Th, Y, Yb and Zr, but there are also data for other trace elements (e.g., other LILE, REE and HFSE data a present for most samples, while transition metals and PGE are more variably represented). Sample locations are available for all except three samples. Locations are given as both Northing-Easting and Longitude-Latitude with UTM grid listed. All samples contain a classification based on a Th/Yb versus Yb/Ti plot described in an associated manuscript. In some case the lithological classification was provided by the source of the data, and these terms are listed.

References:

Jensen, L.S., 1976. New cation plot for classifying subalkalic volcanic rocks. Ont Div Mines Misc Pap(66).

Jørgensen, T.R.C., Gibson, H.D., 2024a. Assemblage compilation of the Abitibi subprovince, Superior Province, Canada. Metal Earth Project, Mineral Exploration Research Centre.

Vite-Sánchez, O., Ross, P.-S., Mercier-Langevin, P., 2024. Mafic to intermediate volcanic rocks of the Blake River Group, Abitibi greenstone belt, Canada: Geochemistry, petrogenesis and relation with VMS deposits. Precambrian Research 404, 107331.
DOI: 10.5281/zenodo.14894607
title: Major and trace element compositions of volcanic rocks from the Deloro Assemblage of the Abitibi Greenstone Belt

description: This dataset is the basis of an investigation of the geochemistry and petrogenesis of the Deloro volcanic assemblage of the Abitibi Greenstone Belt, Superior Province, Canada. The dataset was drawn from a geochemical database of nearly 12000 samples of ultramafic to felsic volcanic rocks from the Abitibi Greenstone Belt. This database includes major and trace element analyses from the "Système d'informations géominières" (SIGÉOM) database of the Ministère des Ressources naturelles et des Forêts (Québec), reports of the Geological Survey of Canada and the Ontario Geological Survey, scientific publications, academic theses, and unpublished data. While much of the database was compiled previously (Vite-Sánchez et al., 2024), we have updated it with more recently released data (2021-2023 data from SIGÉOM and 2012-2022 data from the Ontario Geological Survey). 

The Deloro samples were isolated in ArcGIS based on a preliminary version of the Abitibi assemblage map of Jørgensen and Gibson (2024a). The final Deloro dataset presented here includes only mafic to felsic samples. Samples identified as komatiites and komatiitic basalts on the Jensen (1976) ternary diagram or with anomalous geochemical signatures such as very high Fe-Ti on the Jensen (1976) ternary diagram, extremely low Zr/Hf and Nb/Ta ratios, extreme mobilisation of LREE and major element contents indicating very intense alteration were excluded from the dataset. Thus, a total of 2419 samples comprise the “Deloro dataset”.

The data were curated so that all samples contain major element data and trace element data for Ce, Eu, Gd, La, Lu, Nb, Nd, Sm, Th, Y, Yb and Zr, but there are also data for other trace elements (e.g., other LILE, REE and HFSE data a present for most samples, while transition metals and PGE are more variably represented). Sample locations are available for all except three samples. Locations are given as both Northing-Easting and Longitude-Latitude with UTM grid listed. All samples contain a classification based on a Th/Yb versus Yb/Ti plot described in an associated manuscript. In some case the lithological classification was provided by the source of the data, and these terms are listed.

References:

Jensen, L.S., 1976. New cation plot for classifying subalkalic volcanic rocks. Ont Div Mines Misc Pap(66).

Jørgensen, T.R.C., Gibson, H.D., 2024a. Assemblage compilation of the Abitibi subprovince, Superior Province, Canada. Metal Earth Project, Mineral Exploration Research Centre.

Vite-Sánchez, O., Ross, P.-S., Mercier-Langevin, P., 2024. Mafic to intermediate volcanic rocks of the Blake River Group, Abitibi greenstone belt, Canada: Geochemistry, petrogenesis and relation with VMS deposits. Precambrian Research 404, 107331.
DOI: 10.48514/86pz-j975
title: FARM Data Lockett 2022 Tornado
DOI: 10.15468/dl.t3ygen
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Coordinate reprojected, Continent derived from coordinates, Country derived from coordinates)",
 "OccurrenceStatus is Present",
 "TaxonKey is Eugenia xalapensis (Kunth) DC."
 ]
}

 The dataset includes 193 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002335-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10631795
title: Source Data and Code - Nonlinear thinking in ecology and evolution: applying the threshold elemental ratio across levels of ecological organization

description: Data and R code have been made available to generate Figures 3-5. Data generated from the literature review can be found in 'Lit_review_DB_Jan_26.xlsx' and code to generate Figure 3 using this data can found in 'control_points_lr_plots.R'.  Written out meta-data and procedure for literature review are found in 'lit_review_metadata_jan_26_2024.docx'. All analyses to recreate Figures 4 & 5 use 'chemostatModel_analyses_figures.R'. For analyses and figures, save files and set working directory in R code to where data files are saved.
DOI: 10.5281/zenodo.10631796
title: Source Data and Code - Nonlinear thinking in ecology and evolution: The case for stoichiometric control points

description: Data and R code have been made available to generate Figures 3-5. Data generated from the literature review can be found in 'Lit_review_DB_Jan_26.xlsx' and code to generate Figure 3 using this data can found in 'control_points_lr_plots.R'.  Written out meta-data and procedure for literature review are found in 'lit_review_metadata_jan_26_2024.docx'. All analyses to recreate Figures 4 & 5 use 'chemostatModel_analyses_figures.R'. For analyses and figures, save files and set working directory in R code to where data files are saved.
DOI: 10.5281/zenodo.12628550
title: Source Data and Code - Nonlinear thinking in ecology and evolution: The case for stoichiometric control points

description: Data and R code have been made available to generate Figures 3-5. Data generated from the literature review can be found in 'Lit_review_DB_Jan_26.xlsx' and code to generate Figure 3 using this data can found in 'control_points_lr_plots.R'.  Written out meta-data and procedure for literature review are found in 'lit_review_metadata_jan_26_2024.docx'. All analyses to recreate Figures 4 & 5 use 'chemostatModel_analyses_figures.R'. For analyses and figures, save files and set working directory in R code to where data files are saved.
DOI: 10.5281/zenodo.14896078
title: Source Data and Code - Nonlinear thinking in ecology and evolution: applying the threshold elemental ratio across levels of ecological organization

description: Data and R code have been made available to generate Figures 3-5. Data generated from the literature review can be found in 'Lit_review_DB_Jan_26.xlsx' and code to generate Figure 3 using this data can found in 'control_points_lr_plots.R'.  Written out meta-data and procedure for literature review are found in 'lit_review_metadata_jan_26_2024.docx'. All analyses to recreate Figures 4 & 5 use 'chemostatModel_analyses_figures.R'. For analyses and figures, save files and set working directory in R code to where data files are saved.
DOI: 10.5519/qd.dktv5y4c
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (20 records)
DOI: 10.15468/dl.zzfz3w
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Bryx veleronis Herald, 1940"
 ]
}

 The dataset includes 33 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002337-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t3gtn9
title: Occurrence Download

description: A dataset containing 42162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ligustrum sinense Lour.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 42162 records from 195 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002336-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e220145
title: Sources and uses of data at the Bureau of Consumer Financial Protection

description: The Dodd-Frank Act states that the Bureau "shall seek to implement 
and … enforce Federal consumer financial law consistently for the 
purpose of ensuring that all consumers have access to markets for 
consumer financial products and services and that [those markets] are 
fair, transparent, and competitive." Data informs this work to a great 
extent.To fulfill its statutory functions and obligations, the 
Bureau obtains data to inform its decisions. These activities 
include: Writing rules, supervising companies, and enforcing the law<br>Taking consumer complaints<br>Providing financial education<br>Researching the consumer experience of using financial products<br>Monitoring financial markets for new risks to consumers<br>This
 report describes the Bureau’s data governance program as well as what 
data the Bureau collects, where the data come from, how data are used, 
and how data are reused within the Bureau. On June 27, 2019, the
 Bureau published a supplement that includes information on 
voluntarily-provided consumer data assets and the third-party costs 
associated with the purchase and/or collection of information.<br><br>
DOI: 10.3886/e220145v1
title: Sources and uses of data at the Bureau of Consumer Financial Protection

description: The Dodd-Frank Act states that the Bureau "shall seek to implement 
and … enforce Federal consumer financial law consistently for the 
purpose of ensuring that all consumers have access to markets for 
consumer financial products and services and that [those markets] are 
fair, transparent, and competitive." Data informs this work to a great 
extent.To fulfill its statutory functions and obligations, the 
Bureau obtains data to inform its decisions. These activities 
include: Writing rules, supervising companies, and enforcing the law<br>Taking consumer complaints<br>Providing financial education<br>Researching the consumer experience of using financial products<br>Monitoring financial markets for new risks to consumers<br>This
 report describes the Bureau’s data governance program as well as what 
data the Bureau collects, where the data come from, how data are used, 
and how data are reused within the Bureau. On June 27, 2019, the
 Bureau published a supplement that includes information on 
voluntarily-provided consumer data assets and the third-party costs 
associated with the purchase and/or collection of information.<br><br>
DOI: 10.15468/dl.sxt4ve
title: Occurrence Download

description: A dataset containing 37222571 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Geometry POLYGON((-75 -15, -75 5, -50 5, -50 -15, -75 -15))"
 ]
}

 The dataset includes 37222571 records from 643 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002293-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34683/sr437
title: StoneRounds Case: SR437
title: AR Stargardt Disease

description: StoneRounds Case SR437 was diagnosed with AR Stargardt Disease likely caused by mutations in the gene: ABCA4.