cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.71m33/4
title: Opah COI nexus file

description: Nexus file containing cytochrome c oxidase sequence data for all samples
DOI: 10.5061/dryad.71m33/5
title: Opah cytb nexus

description: Nexus file containing cytochrome b sequence data
DOI: 10.5061/dryad.71m33/6
title: Opah rag1 nexus

description: Nexus file containing RAG1 sequence data
DOI: 10.5061/dryad.71m33/7
title: Sample information

description: Excel file containing sampling locality, specimen identification number, COI haplotype #, COI lineage identifier, and GenBank accession #'s for all samples used in this study.
DOI: 10.5061/dryad.75nv22qj/12
title: turtles-mrbayes-thin-1000-output.tar.bz2

description: MRBAYES output following 5,000,000 iterations (thin=1000) after inputting turtles-mrbayes-concatenated-nexus-file.nex.bz2. We generated this output from the "thin-100" data set (turtles-mrbayes-thin-100-output.tar.bz2) by keeping every 1000th record.
DOI: 10.5061/dryad.82201/4
title: ExpressionCCA1

description: qPCR results for gene PaCCA1
DOI: 10.5061/dryad.92568/1
title: Main table - NAS database

description: List of all new active substances approved in Canada from January 1, 1995 to March 31, 2013.
DOI: 10.5061/dryad.92568/2
title: NAS - PMPRB & Prescrire ratings

description: Therapeutic rating of new active substances approved in Canada from January 1, 1995
DOI: 10.5061/dryad.9r2h3/3
title: Keller_etal_MolEcol_2012_DIYABC

description: Reference table for DIYABC demographic modeling.
DOI: 10.5061/dryad.c3b75/2
title: Tait and Havenhand E. coli data

description: E. coli data.txt: This data records the number of Balanus improvisus cyprids exploring biofilms of E. coli expressing recombinant AHL synthases after 2 days incubation. For each AHL synthase gene, this is compared to a background control (E. coli carrying the same plasmid without the AHL synthase insertion). Data is the percent number of cyprids actively exploring (crawling) on the biofilms. This data was recorded by Karen Tait, Plymouth Marine Laboratory (ktait@pml.ac.uk) at the Department of Biological and Environmental Sciences, Tjarno, Sweden in June 2009. Column headings: Vessel number (numbered 1 – 21); no biofilm (vessel contained no biofilm); E. coli pGEM (control biofilm); E. coli pGEM  sulI (produces the AHLs C4-HSL, HC6-HSL, C8-HSL and OC10-HSL); E. coli pT3T7 (control biofilm); E. coli pT3T7 luxI (produces the AHL OC6-HSL); E. coli pUCP18 (control biofilm); E. coli pUCP18 rhlI (produces the AHL C4-HSL); E. coli pET3a (control biofilm); E. coli pET3a vanI (produces the AHL OC10-HSL).
DOI: 10.5061/dryad.cj27s/2
title: Medina&Francis_BiolLett_data
DOI: 10.5061/dryad.cq737/1
title: Configs

description: Configuration files needed to repeat Avida runs.
DOI: 10.5061/dryad.dd65d/3
title: Mouse activity data WT_1197
DOI: 10.5061/dryad.dd65d/4
title: Mouse activity data WT_1196
DOI: 10.5061/dryad.dd65d/6
title: Mouse activity data WT_1194
DOI: 10.5061/dryad.fg679/1
title: Main table - NAS database

description: Database listing all new active substances approved by Health Canada from January 1, 1995 to March 31, 2013 along with dates and nature of serious safety warnings (dates in bold)
DOI: 10.5061/dryad.g4n13/12
title: Site04-03
DOI: 10.5061/dryad.g4n13/13
title: Site05-01
DOI: 10.5061/dryad.g4n13/14
title: Site05-02
DOI: 10.5061/dryad.g4n13/17
title: Site06-02
DOI: 10.5061/dryad.g4n13/18
title: Site06-03
DOI: 10.5061/dryad.g4n13/20
title: Site07-02
DOI: 10.5061/dryad.gd856/6
title: surveyanalysis

description: Data on leaf damage and insect diversity at the three location over two years.
DOI: 10.5061/dryad.h27b3/2
title: MICROSATS_HAPLOTYPES_Taduncus

description: Genetic (microsatellite and mtDNA haplotype) data from bottlenose dolphin skin samples collected using a remote biopsy system in Moreton Bay, QLD, Australia between 2008-2010.
DOI: 10.5061/dryad.kr154/2
title: Figure 1
DOI: 10.5061/dryad.kr154/3
title: Figure 2
DOI: 10.5061/dryad.mc034/1
title: BENTHOS 2003-2005

description: Benthic cover data for the study sites between 2003-2005
DOI: 10.5061/dryad.mc034/2
title: BENTHOS 2006-2008

description: Benthic cover data for the study sites between 2006-2008
DOI: 10.5061/dryad.ms700/1
title: Reproductive parameters for short- and long term effects of litter size manipulation in the common vole

description: "Short term data"-sheet includes data collected during litter size manipulation. "Long term data" -sheet includes data collected from subsequent reproductive event without manipulation. RMR is resting metabolic rate of the mother measured at day 15-17 of lactation. "Mass_change_ " indicates body mass change of the mother during given period. Days in variable names indicate days after birth. "Mass_change_weaning_pairing%" indicates body mass change of the mother, in percentage, from the weaning of previous litter until the beginning of the next pairing. Data was collected in the laboratory using wild-derived F2 generation (parents) common voles.
DOI: 10.5061/dryad.nr210/1
title: Triturus and Calotriton landmark coordinates

description: Three-dimensional (3D) models of Triturus skulls were obtained from 177 specimens (121 cleared and stained skeletons from the Institute of Biological Research “Siniša Stanković“, Belgrade and 56 alcohol preserved at the Naturalis Biodiversity Center, Leiden). Specimens vaucher numbers are presented in the file. The specimens were scanned with a Skyscan 1172 100 kV computed microtomograph (micro CT-scanner; Skyscan, Aartselaar, Belgium) under settings that were optimized for the material (aluminium ﬁlter Al 0.5 mm, 74 kV, 0.8 rotation step, 515 ms exposure time, four frame averaging). The 3D surface models of newt skulls were produced using SkyScan CT Analyser® 1.10 software, under a marching cube algorithm and a resolution of 26.1 µm.  Forty-eight landmarks were defined. A key to the landmarks, brief anatomical descriptions are presented in the file. The landmark coordinates were recorded from the surface models with the software Landmark IDAV 3.0. at http://graphics.idav.ucdavis.edu/research/EvoMorph). Dataset consisting of  raw landmark coordinates is presented.
DOI: 10.5061/dryad.nr210/2
title: Landmarks numbers and positioning

description: 48 landmarks (22 bilaterally symmetric and four medial landmarks) and wireframe on the dorsal and lateral side of a Triturus skull.
DOI: 10.5061/dryad.nr210/3
title: Lateral dorsal and ventral skull of specimen 2C30

description: The image of the skull is derived from a CT scan with a spatial resolution of 26.1 µm. a) lateral, b) dorsal and d) ventral side of Triturus macedonicus (number 2C30) is presented
DOI: 10.5061/dryad.nr210/4
title: video presentation of Triturus and Calotriton skulls

description: Video representation of Calotriton asper  (ZMA.RenA.44640), Triturus carnifex (IBISS.5c35), Triturus cristatus (IBISS.20052), Triturus dobrogicus (IBISS.14C10), Triturus ivanbureschi (IBISS.22444), Triturus karelinii (IBISS 22242), Triturus macedonicus (IBISS.15c30), Triturus marmoratus (ZMA.RenA.7614_165) and Triturus pygmaeus (IBISS.22576) skulls. MP4 files  for each species separately are zipped together.
DOI: 10.5061/dryad.pd658/1
title: Figure2A

description: Confocal image stack
DOI: 10.5061/dryad.pd658/2
title: Figure2B

description: Confocal image stack
DOI: 10.5061/dryad.pd658/3
title: Figure2C

description: Confocal image stack
DOI: 10.5061/dryad.pd658/4
title: Figure2D

description: Confocal image stack
DOI: 10.5061/dryad.pd658/5
title: Figure2E

description: Confocal image stack
DOI: 10.5061/dryad.pd658/7
title: Figure5A

description: Confocal image stack
DOI: 10.5061/dryad.pd658/8
title: Figure5B

description: Confocal image stack
DOI: 10.5061/dryad.pg4k8/1
title: All raw data.

description: Raw data from the factorial manipulations of above- and below-ground herbivory by the red milkweed beetle on root and shoot chemistry, beetle performance, insect abundances in the field, leaf damage in the field, and fruit production.
DOI: 10.5061/dryad.q2h0c/1
title: Secher et al

description: Information about U6 complete and partial sequences
DOI: 10.5061/dryad.qf2vm/3
title: MD LD genotypes

description: Mule deer microsatellite data for estimating linkage disequlibrium
DOI: 10.5061/dryad.qf2vm/4
title: MD case control genotypes

description: mule deer microsatellite data from CWD case-controls
DOI: 10.5061/dryad.s0p50/10
title: D. pseudoobscura at 6 temperatures

description: D. pseudoobscura embryonic development at 6 different temperatures (17.5˚C, 20˚C, 22.5˚C, 25˚C, 27.5˚C, and 30˚C). Every second of video is 15 minutes of development.
DOI: 10.5061/dryad.s0p50/6
title: 11 species at 27.5C

description: Seven species (D. ananassae, D. erecta, D. melanogaster, D. mojavensis, D. sechellia, D. simulans, D. virilis, D. willistoni, and D. yakuba) developing at 27.5˚C. Every second of video is 15 minutes of development.
DOI: 10.5061/dryad.s0p50/7
title: D. ananassae at 7 temperatures

description: D. ananassae development at 7 different temperatures (17.5˚C, 20˚C, 22.5˚C, 25˚C, 27.5˚C, 30˚C, and 32.5˚C). Scaling is 15 minutes of development per second of video.
DOI: 10.5061/dryad.s0p50/8
title: D. mojavensis at 6 temperatures

description: D. mojavensis embryonic development at 6 different temperatures (17.5˚C, 20˚C, 22.5˚C, 25˚C, 27.5˚C, and 30˚C). Every second of video is 15 minutes of development.
DOI: 10.5061/dryad.s0p50/9
title: D. virilis at 6 temperatures

description: D. virilis development at 6 different temperatures (17.5˚C, 20˚C, 22.5˚C, 25˚C, 27.5˚C, and 30˚C). Scaling is 15 minutes of development per second of video.
DOI: 10.5061/dryad.s449d/3
title: Maxillaria figure8 matrix

description: Matrix of combined molecular data (nrITS, matK, atpB-rbcL, rpoC1) for 84 taxa, presented in figure 8.
DOI: 10.7267/n92z13fv
title: Transcriptome assembly and analyses of gene expression in diploid wheat Triticum monococcum

description: Background: Triticum monococcum (2n) is a close ancestor of T. urartu, the A-genome progenitor of cultivated hexaploid wheat, and is therefore a useful model for the study of components regulating photomorphogenesis in diploid wheat. In order to develop genetic and genomic resources for such a study, we constructed genome-wide transcriptomes of two Triticum monococcum subspecies, the wild winter wheat T. monococcum ssp. aegilopoides (accession G3116) and the domesticated spring wheat T. monococcum ssp. monococcum (accession DV92) by generating de novo assemblies of RNA-Seq data derived from both etiolated and green seedlings. Principal Findings: The de novo transcriptome assemblies of DV92 and G3116 represent 120,911 and 117,969 transcripts, respectively. We successfully mapped ~90% of these transcripts from each accession to barley and ~95% of the transcripts to T. urartu genomes. However, only ~77% transcripts mapped to the annotated barley genes and ~85% transcripts mapped to the annotated T. urartu genes. Differential gene expression analyses revealed 22% more light up-regulated and 35% more light down-regulated transcripts in the G3116 transcriptome compared to DV92. The DV92 and G3116 mRNA sequence reads aligned against the reference barley genome led to the identification of ~500,000 single nucleotide polymorphism (SNP) and ~22,000 simple sequence repeat (SSR) sites. Conclusions: De novo transcriptome assemblies of two accessions of the diploid wheat T. monococcum provide new empirical transcriptome references for improving Triticeae genome annotations, and insights into transcriptional programming during photomorphogenesis. The SNP and SSR sites identified in our analysis provide additional resources for the development of molecular markers. For more details on the Triticum monococcum transcriptome project data, visit: http://jaiswallab.cgrb.oregonstate.edu/genomics/wheat
DOI: 10.5061/dryad.101n0/1
title: Parasite frequency, microfauna frequency and weather data for both study phases

description: This is an Excel spreadsheet with three worksheets.  The first worksheet contains data associated with samples collected as part of field experiments conducted in the USA.  It also contains a column of keys and notes necessary to interpret the data in the first two worksheets. The second worksheet contains data associated with samples collected during the patch surveys conducted in the UK. The third worksheet contains data about the weather during both phases of the study, and lists which samples were collected on which dates.
DOI: 10.5061/dryad.1qp42/11
title: Control MNase-seq data aligned to Haloferax genome (BAI file)
DOI: 10.5061/dryad.1qp42/9
title: Control MNase-seq data aligned to Haloferax genome (BAM file PART1)

description: naked DNA control (MNase-seq)
DOI: 10.5061/dryad.23g44/10
title: DP21

description: alignment
DOI: 10.5061/dryad.2br48/1
title: RF1 subfamily alignment (mtRF1a, mtRF1 and pRF1)

description: Fasta multiple sequence alignment of Release Factor 1 proteins. Sequences were retrieved from GenBank nr database using PSI-BLAST. The alignment was obtained with ClustalW (v2.0.10), and 60% of the gaps was removed with BMGE (v1.0). The alignment was visually inspected and manually adjusted to accuratly align all functionally characterized domains and sequence motifs. Fasta multiple sequence alignment of Release Factor 2 proteins. Sequences were retrieved from GenBank nr database using PSI-BLAST. The alignment was obtained with ClustalW (v2.0.10), and 60% of the gaps was removed with BMGE (v1.0). The alignment was visually inspected and manually adjusted to accuratly align all functionally characterized domains and sequence motifs. Each sequence header contains the species name, the identity of each protein and, for bacterial species, the bacterial group they belong to. The numbers present in the header are not meaningful.
DOI: 10.5061/dryad.2cs4g/1
title: HapMap.hmc.txt.tar

description: HapMap hmc files generated by UNEAK (Universal Network Enabled Analysis Kit) filter with default settings.
DOI: 10.5061/dryad.2cs4g/2
title: HapMap.hmp.txt.tar

description: HapMap hmp file generated by UNEAK (Universal Network Enabled Analysis Kit) filter with default settings
DOI: 10.5061/dryad.2d218/1
title: Reproductive traits of Lobelia inflata

description: This dataset includes measurements of seven reproductive characteristics for 1,509 Lobelia inflata (Campanulaceae) individuals. Plants were grown in the lab or at a field site, but were originally sourced from a population in the Petawawa Research Forest (Ontario, Canada).
DOI: 10.5061/dryad.2gj3n/1
title: SUPPLEMENTARY Figure 1-7

description: Phylogenetic analysis
DOI: 10.5061/dryad.2p75f/1
title: simulation source files

description: Complete C++ sources for the simulation program described in the article.
DOI: 10.5061/dryad.351h3/1
title: Hemoglobin gene expression, SNP genotype, and protein components in European whitefish
DOI: 10.5061/dryad.351h3/2
title: Red blood cell morphology in European whitefish
DOI: 10.5061/dryad.42ph0/2
title: Hopkins-SupplementaryTable1

description: See Hopkins_tables-description.pdf for explanation of table
DOI: 10.5061/dryad.42ph0/3
title: Hopkins-SupplementaryTable2

description: See Hopkins_tables-description.pdf for explanation of table
DOI: 10.5061/dryad.43h8c/14
title: chr14
DOI: 10.5061/dryad.43h8c/15
title: chr15
DOI: 10.5061/dryad.43h8c/16
title: chr16
DOI: 10.5061/dryad.43h8c/17
title: chr17
DOI: 10.5061/dryad.43h8c/18
title: chr18
DOI: 10.5061/dryad.43h8c/19
title: chr19
DOI: 10.5061/dryad.4541m/1
title: Dryad_Fig4

description: Contains results of leaf-to-canopy scaling as shown in Fig 4 and Table 4.Leaf-level respiration measurements were made in the laboratory at different temperatures and this was used to calculate Q10 and R25 values for each leaf. These data were used along with species specific information on leaf area index and relative abundance, long-term temperature data, and information on the relationship between respiration and irradiance to model stand level annual respiration fluxes, using R for data analysis.
DOI: 10.5061/dryad.4541m/2
title: Dryad_FigS1

description: Contains leaf level temperature response curves of respiration, measured in the laboratory using an infra-red gas analyzer connected to a Walz temperature-controlled cuvette. For each species data are shown for one leaf. These data correspond to figure S1.
DOI: 10.5061/dryad.50tp1/1
title: P. excavatum Pair-wise Rousset's distance between individual parasites
DOI: 10.5061/dryad.50tp1/2
title: P. fluviatilis_Pair-wise Rousset's distance between individual parasites
DOI: 10.5061/dryad.57vq0/1
title: Mitogenomegenealignments
DOI: 10.5061/dryad.5d6p6/2
title: Btub Salgado

description: B-tubulin gene sequence alignment
DOI: 10.5061/dryad.5d6p6/3
title: EF Salgado

description: translation elongation factor 1α gene sequence alignment
DOI: 10.5061/dryad.5d6p6/4
title: ITS Salgado

description: Complete internal transcribed spacers 1 and 2 (ITS, including 5.8S of the nuclear ribosomal DNA) sequence alignment
DOI: 10.5061/dryad.5d6p6/6
title: RPB1 Salgado

description: RNA polymerase II subunit 1 gene sequence alignment
DOI: 10.5061/dryad.5ds40/1
title: Analysis (Mathematica file)

description: Mathematica 8.0 (Wolfram Research,  Inc. 2010) package detailing the recursion equations, analyses, and simulations conducted.
DOI: 10.5061/dryad.5ds40/2
title: Analysis (PDF)

description: PDF of a Mathematica 8.0 (Wolfram Research,  Inc. 2010) package detailing the recursion equations, analyses, and simulations conducted.
DOI: 10.5061/dryad.7dm1p/1
title: Hatchard et al. 2014 BMJ Open 003757 Dataset final

description: Excel spreadsheet of evidence data - coded for relevance, publication status, independence and declaration of conflict of interest.
DOI: 10.5061/dryad.7dm1p/2
title: Hatchard et al. 2014 BMJ Open 003757 n=37 SR

description: Systematic review data coded for subject matter, publication status and independence n=37
DOI: 10.5061/dryad.7dm1p/3
title: Hatchard et al. 2014 BMJ Open 003757 n=77 coded

description: Tobacco company evidence coded for subject matter, publication status and independence n=77
DOI: 10.5061/dryad.7dm1p/4
title: Hatchard et al. 2014 BMJ Open 003757 n=77 coi

description: Tobacco company evidence coded for conflict of interest declared n=77.
DOI: 10.5061/dryad.7dm1p/5
title: Hatchard et al. 2014 BMJ Open 003757 n=143

description: All tobacco company research evidence cited in submissions n=143
DOI: 10.5061/dryad.84m54/2
title: Volumetric data from a micro-CT scan of Eunice sp., iodine-stained
DOI: 10.5061/dryad.84r5q/2
title: Galdieria_in_Richmond_Mine_FISH

description: Micrographs of two G. sulphuraria cells detected using Cya1208 rRNA probe in an A-drift biofilm from the Richmond Mine
DOI: 10.5061/dryad.8j013/1
title: Wood Fall Data and Species List
DOI: 10.5061/dryad.8j013/2
title: R Script for Wood Fall Analyses
DOI: 10.5061/dryad.9tb07/2
title: Video of networks from each treatment evolving across generations

description: Illustration of the change across evolutionary time for both the PA and P&CC treatments.
DOI: 10.5061/dryad.dc4gs/1
title: Plant cover and abundance data

description: Excel file including: treatment descriptions, plant cover values, and plant abundance data.
DOI: 10.5061/dryad.dd65d/7
title: Mouse activity data WT_1065
DOI: 10.5061/dryad.dd65d/8
title: Mouse activity data WT_1064
DOI: 10.5061/dryad.dn45c/1
title: Reference_sequences

description: Reference DNA sequences for each taxon in the artificial DNA blend used to test the five metabarcoding markers. Sequences were downloaded from GenBank or generated by Sanger or high-throughput sequencing.
DOI: 10.5061/dryad.dn45c/2
title: Enviro metabarcodes for insects PGM data

description: Ion Torrent PGM sequencing reads (FASTQ format) separated by barcode according to marker and PCR protocol (pub - published protocol, 45 - standardised protocol).
DOI: 10.5061/dryad.f81sf/3
title: Sequence_Alignment_ND4
DOI: 10.5061/dryad.fg679/2
title: Therapeutic rating scores

description: Database contains the therapeutic rating scores for new active substances from the Patented Medicine Prices Review Board and from Prescrire International.
DOI: 10.5061/dryad.g4n13/28
title: Site10-01
DOI: 10.5061/dryad.gr6b8/1
title: Dryad_readme

description: Information about the Dryad accession.
DOI: 10.5061/dryad.gr6b8/2
title: Dryad_alignment

description: Alignment of the sequence data (a part of the homeodomain transcription factor 2, HD2)
DOI: 10.5061/dryad.gr6b8/3
title: Dryad_information

description: Information about the analysed isolates of Serpula lacrymans.
DOI: 10.5061/dryad.h3s0r/1
title: Estimated correlations between parameters and variables
DOI: 10.5061/dryad.h3s0r/2
title: The elementary effects (mean and sdev) of each parameter on each variable
DOI: 10.5061/dryad.h3s0r/3
title: The elementary effects (mean and sdev) of each parameter on each variable (RData)
DOI: 10.5061/dryad.h3s0r/4
title: Estimated correlations between elementary effects and parameters (t = 1 minute)
DOI: 10.5061/dryad.j2r64/2
title: Appendix-1_MorphoCharacterDescriptions

description: Appendix 1. Morphological character descriptions.
DOI: 10.5061/dryad.j2r64/8
title: Supplementary Figure 1. Morphological versus molecular branch lengths

description: Figure showing the molecules-only and morphology-only trees, as well as the correlation between morphological and molecular branch lengths.
DOI: 10.5061/dryad.j3r20/4
title: Simulations
DOI: 10.5061/dryad.jm8vp/1
title: STable 1

description: Basic model - variation in female discrimination rate
DOI: 10.5061/dryad.pd658/10
title: Figure6B

description: Confocal image section
DOI: 10.5061/dryad.pd658/11
title: Figure6C

description: Confocal image section
DOI: 10.5061/dryad.pd658/12
title: Figure8A

description: Confocal image stack
DOI: 10.5061/dryad.pd658/13
title: Figure8B

description: Confocal image stack
DOI: 10.5061/dryad.pd658/9
title: Figure6A

description: Confocal image projection
DOI: 10.5061/dryad.qp0s0/1
title: Heibl&Renner_Oxalis_data
DOI: 10.5061/dryad.qp0s0/2
title: Oxalis_Table_S1_Dryad_update

description: Contains GenBank accession numbers
DOI: 10.5061/dryad.r3g90/1
title: Adams_Supplemental_Data_1

description: Character and taxon sampling for phylogenetic analysis of Wannchampsus kirpachi
DOI: 10.5061/dryad.r6624/1
title: direct_immune_parameters_four_month_offspring

description: Measurements of direct immune parameter analyses in four month old offspring.
DOI: 10.5061/dryad.s5k0t/1
title: Supplementary data for evolution of scrotum paper

description: SI: Table 1. Body temperature and body mass data coded as testicond, inguinal, or scrotal, and cursorial or non-cursorial. S2: Data selection criteria.S3: Table 2 Statistics of analysis of covariance (ANCOVA) testing for the difference in body temperature as a function of testis location [testicond (n = 11), inguinal (n = 21), and scrotal (n = 51)]. S4: Table 3 Statistics of analysis of covariance (ANCOVA) testing for the difference in body temperature as a function of testis location (testicond, n = 11, and non-testicond, n = 72 mammal families). S5: Table 4 Statistics of phylogenetically independent analyses of covariance (ANCOVA) testing for the difference in body temperature between cursorial and non-cursorial mammal families. S6: Table 5 Statistics of phylogenetically independent analyses of covariance (ANCOVA) testing for the difference in body temperature between cursorial and non-cursorial scrotal mammal families.
DOI: 10.5061/dryad.sd080/1
title: birds-contigs-assembled-from-uce-loci.fasta.gz

description: UCE contigs assembled from raw reads collected using target enrichment.
DOI: 10.5061/dryad.sd080/2
title: birds-lastz-matches-of-probes-to-contigs.lastz.tar.gz

description: LASTZ matches of probes to species-specific contigs in contigs-assembled-from-uce-loci.fasta.gz
DOI: 10.5061/dryad.sd080/3
title: birds-matches-of-probes-to-contigs.sqlite.gz

description: SQLITE database of LASTZ matches between assembled contigs in birds-contigs-assembled-from-uce-loci.fasta.gz and the UCE probes. This database is used to construct data sets containing loci that are shared across taxa and prep data for alignment.  These data are derived from birds-lastz-matches-of-probes-to-contigs.lastz.tar.gz.