cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/fe0-t3d-57a
title: Conus quercinus [Lightfoot], 1786

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zx1-qfh-tln
title: Conus tinianus Hwass, 1792

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1lf-l2y-7xr
title: Colus gracilis (da Costa, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.w6gek2
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Petrosedum rupestre",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 30 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083471-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69gqy4
title: Occurrence Download

description: A dataset containing 284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physalis peruviana",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 284 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083473-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ua79he
title: Occurrence Download

description: A dataset containing 130451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Baeolophus ridgwayi)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 130451 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083442-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ncjk3t
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Russelia equisetiformis",
 "Country is Fiji",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083474-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sw7dq9
title: Occurrence Download

description: A dataset containing 16406 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Danaus plexippus"
 ]
}

 The dataset includes 16406 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011054-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sb2pn9
title: Occurrence Download

description: A dataset containing 2112 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "Country is one of (United States of America, United States Minor Outlying Islands, American Samoa, Micronesia (Federated States of), Guam, Marshall Islands, Northern Mariana Islands, Puerto Rico, Palau, Virgin Islands (U.S.))",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Epioblasma triquetra (Rafinesque, 1820))",
 "OccurrenceStatus is one of (Present)",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Specimen, Living Specimen, Occurrence evidence)"
 ]
 }
 ]
}

 The dataset includes 2112 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012086-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fmj699
title: Occurrence Download

description: A dataset containing 137 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nymphoides grayanum (Griseb.) Kuntze"
 ]
}

 The dataset includes 137 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049279-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rjrbbz
title: Occurrence Download

description: A dataset containing 274447 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((90 50,120 50,120 90,90 90,90 50))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 274447 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144700-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.geqf66
title: Occurrence Download

description: A dataset containing 1470 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (France)",
 "Year is greater than or equal to 1900",
 "TaxonKey is Halyomorpha halys (Stål, 1855)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1470 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002138-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x5kr7j
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Syllis truncata Haswell, 1920",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 41 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077708-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15100486
title: An updated Bioconductor workflow for correlation profiling subcellular proteomics

description: Files for users of the workflow "An updated Bioconductor workflow for correlation profiling subcellular proteomics". Files include the Proteome Discoverer (v3.1) processing and consensus workflows used to process the use case raw MS files. For raw data please refer to PRIDE (dataset identifier PXD055123).

Also provided are the files required for users to run the workflow on the use-case data. This includes the PSM and protein-level output .txt files corresponding the the Proteome Discoverer identification search, the mrk.csv file containing subcellular markers and the bandleres.rda and tagm_mcmc_params.rda files for users to load the bandleres and mcmc_model objects.  

Finally, the Appendix is provided as a pdf file. The Appendix contains information about 1) the identification search of the use-case data with Proteome Discoverer, 2) alternative data import methods, 3) how to adapt the workflow to MaxQuant output data, and 4) an example DIA correlation profiling workflow using data output from DIA-NN. The input files required to run the example DIA workflow are also provided here (diann_report.tsv and 220813_Universal_Protein_Contaminants_HaoGroup_modified.fasta).
DOI: 10.5281/zenodo.15426774
title: An updated Bioconductor workflow for correlation profiling subcellular proteomics

description: Files for users of the workflow "An updated Bioconductor workflow for correlation profiling subcellular proteomics". Files include the Proteome Discoverer (v3.1) processing and consensus workflows used to process the use case raw MS files. For raw data please refer to PRIDE (dataset identifier PXD055123).

Also provided are the files required for users to run the workflow on the use-case data. This includes the PSM and protein-level output .txt files corresponding the the Proteome Discoverer identification search, the mrk.csv file containing subcellular markers and the bandleres.rda and tagm_mcmc_params.rda files for users to load the bandleres and mcmc_model objects.  

Finally, the Appendix is provided as a pdf file. The Appendix contains information about 1) the identification search of the use-case data with Proteome Discoverer, 2) alternative data import methods, 3) how to adapt the workflow to MaxQuant output data, and 4) an example DIA correlation profiling workflow using data output from DIA-NN. The input files required to run the example DIA workflow are also provided here (diann_report.tsv and 220813_Universal_Protein_Contaminants_HaoGroup_modified.fasta).
DOI: 10.5281/zenodo.15537457
title: An updated Bioconductor workflow for correlation profiling subcellular proteomics

description: Files for users of the workflow "An updated Bioconductor workflow for correlation profiling subcellular proteomics". Files include the Proteome Discoverer (v3.1) processing and consensus workflows used to process the use case raw MS files. For raw data please refer to PRIDE (dataset identifier PXD055123).

Also provided are the files required for users to run the workflow on the use-case data. This includes the PSM and protein-level output .txt files corresponding the the Proteome Discoverer identification search, the mrk.csv file containing subcellular markers and the bandleres.rda and tagm_mcmc_params.rda files for users to load the bandleres and mcmc_model objects.  

The Appendix is provided as a pdf file. The Appendix contains information about 1) the identification search of the use-case data with Proteome Discoverer, 2) alternative data import methods, 3) how to adapt the workflow to MaxQuant output data, and 4) an example DIA correlation profiling workflow using data output from DIA-NN. The input files required to run the example DIA workflow are also provided here (diann_report.tsv and 220813_Universal_Protein_Contaminants_HaoGroup_modified.fasta).

Finally, the .Rmd file containing the code used to generate the final F1000 publication is provided, along with a .pdf file of the publication
DOI: 10.6084/m9.figshare.28431764
title: Table 1_RIA-Novosti on Latvia Poland and Serbia_2014-2021.pdf

description: A full list of researched media materials published by RIA Novosti on Latvia, Poland and Serbia, along with their subject matter and description.
DOI: 10.15468/dl.3eytht
title: Occurrence Download

description: A dataset containing 3165 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EWT: Carnivore Conservation Programme Cheetah Tracking Data"
 ]
}

 The dataset includes 3165 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005421-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/brv-a1t-dxg
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h7g-qxk-2xt
title: †Neochonetes Muir-Wood, 1962

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v0d-zvp-g1n
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8gd-l4c-h6y
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n1n-13m-lh2
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e6a-r14-np3
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gn9-g32-6me
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f8s-eyf-jej
title: Arthropoda

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q7l-8nz-q8q
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rxh-m92-srt
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.18712/nsd-nsd3315-v2
title: Graduate survey 2023 - Half a Year After Graduation

description: The Graduate Survey 2023 - Half a Year After Graduation is a survey conducted by  Nordic Institute for Studies in Innovation, Research and Education(NIFU). The study examines the transition from education to employment among individuals who completed a master’s degree in the spring of 2023. Candidate surveys are divided into two categories: six-month surveys and specialized surveys. The six-month surveys are conducted by NIFU every other year, targeting individuals with a master’s degree six months after graduation. These surveys encompass most groups of graduates holding advanced degrees from Norwegian educational institutions.

The surveys provide valuable insights into the labor market situation of recent graduates. Since 2007, the survey has also included questions about candidates' evaluations of their education, their educational institutions, and the extent to which they found their studies relevant to the needs of the labor market. Most of the questions have remained unchanged over time, allowing the six-month surveys to serve as a solid foundation for reliable time series data.
DOI: 10.3535/76n-1wc-zej
title: †Schizophoria King, 1850

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mkd-q16-ghj
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fwy-875-97c
title: Archaeolithothamnion Rothpletz ex Foslie, 1898

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/eh5-b3f-rv0
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ttt-nwp-j4x
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ekd-kjs-wmb
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z15-05n-ks8
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xxm-vlk-g5s
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rt9-w8j-l4w
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pw7-ctd-xty
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wl9-2ry-ywq
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5dr-6lt-ts2
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fvq-j7r-d8v
title: Sorex (Sorex) minutus Linnaeus, 1766

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9bd-vrz-5cf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f4p-23g-310
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bqq-e15-0n3
title: †Sanguinolites McCoy, 1844

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c9p-ten-791
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yrh-dlw-xa7
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/afc-nfh-g3q
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w2f-71a-vlk
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k1f-x1a-dk4
title: †Horridonia Chao, 1927

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lrm-8a9-5ey
title: Duvalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kd4-vyf-c4e
title: †Ellipsocoenia d'Orbigny, 1850

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/20g-3tl-1xp
title: Scutellum

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l65-t63-z2w
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.85p52q
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pistia stratiotes",
 "Country is Myanmar",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022804-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/2vv-kym-ppv
title: Rangifer tarandus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wbw-gg4-ryb
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3ze-pt4-840
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/eha-2w8-2lw
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.21233/bgbz-1978
title: Anacoco Lake ostracode surface sample dataset

description: Raw data for the Anacoco Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.wm6xrb
title: Occurrence Download

description: A dataset containing 165588 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chamaenerion angustifolium subsp. angustifolium",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2010",
 "HasCoordinate is true"
 ]
}

 The dataset includes 165588 records from 720 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020870-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/q0pt-5h76
title: Seonam-dong physical sedimentology dataset

description: Raw data for the Seonam-dong physical sedimentology dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/8ynt-0m57
title: Summit Lake diatom surface sample dataset

description: Raw data for the Summit Lake diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/d40d-6332
title: Winnisquam Lake diatom surface sample dataset

description: Raw data for the Winnisquam Lake diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.rdz86k
title: Occurrence Download

description: A dataset containing 559 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "Country is one of (Russian Federation, Mongolia, Kazakhstan, China)",
 "Geometry POLYGON((72.45408 37.6799,109.10428 37.6799,109.10428 57.21872,72.45408 57.21872,72.45408 37.6799))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Castor Linnaeus, 1758",
 "Year 1980-2025"
 ]
}

 The dataset includes 559 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020878-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/qrzc-jx47
title: Lake Nipigon/Gull Bay water chemistry dataset

description: Raw data for the Lake Nipigon/Gull Bay water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/5khk-ph22
title: Bell Farm [P1354] vertebrate fauna dataset

description: Raw data for the Bell Farm [P1354] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15362040
title: Survey instrument, codebook, and anonymized responses from the Korean medical student mental health study

description: This dataset supports the study “Mental health of medical students who took a leave of absence during the 2024 medical crisis in South Korea” It comprises:

 

1. CRF(Case Report Form)





Anonymized raw survey data (rows = individual participants; columns = variables)


code about variables in columns


        

2. Questionnaire





Part A: PHQ‑9 items




Part B: BEPSI‑K items




Part C: External stressors items