cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2dmrph
title: CCDC 2223527: Experimental Crystal Structure Determination

description: Related Article: Wenlei Tang, Zhen-Wu Shao, Li Xiong, Zhiyuan Zhang, Kaiyuan Tan, Xuan Feng, Wenjing Wu, Chong Liu|2023|CrystEngComm|25|1462|doi:10.1039/D3CE00022B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13135/ela-348
title: Statue base for Ariobarzanes II of Cappadocia, restorer of the Odeion of Pericles
DOI: 10.6084/m9.figshare.22227547
title: A new hybrid credit scoring ensemble model with feature enhancement and soft voting weight optimization

description: The raw data are divided into five parts: the Australian credit dataset (Australian.csv), the German credit dataset (German.csv), the Polish credit dataset (Polish.csv), the Taiwan credit dataset (Taiwan.csv), and the Creator credit dataset (Creator.csv).
DOI: 10.13135/ela-392
title: Statue base for Sextus Pompeius, grandfather of Pompey
DOI: 10.5281/zenodo.7692989
title: Welfare regulations, 1711-1929, Jewish community Amsterdam

description: Welfare regulations, 1711-1929, Jewish community Amsterdam. Title, link and year. Sorted by date, with links to the original documents via libraries and archives. This is being used as part of a research project.
DOI: 10.5281/zenodo.7692988
title: Welfare regulations, 1711-1929, Jewish community Amsterdam

description: Welfare regulations, 1711-1929, Jewish community Amsterdam. Title, link and year. Sorted by date, with links to the original documents via libraries and archives. This is being used as part of a research project.
DOI: 10.5066/p9olw5fj
title: Data from an investigation of snake fungal disease at Palmetto Island State Park, Vermilion Parish, Louisiana from 2015-2019

description: This dataset contains the results from 80 visual encounter surveys at two wetlands in Palmetto Island State Park, Vermillion Parish, Louisiana from August 2015 to April 2019. These surveys mainly targeted snakes but small turtles and anoles were also opportunistically captured. Captured animals were swabbed to determine the prevalence of Ophidiomyces ophiodiicola, the causative agent of Snake Fungal Disease. Physical measurements were taken on all captured individuals. This dataset also includes environmental data such as temperature, water level, and humidity at the study site.
DOI: 10.13135/ela-393
title: Statue base for Cn. Pompeius Strabo, father of Pompey
DOI: 10.13135/ela-395
title: Statue base for Sulla
DOI: 10.13135/ela-396
title: Statue base for the brother of Lucullus
DOI: 10.5281/zenodo.7705477
title: IODP Expedition 385 Core drilling summary

description: Report includes detailed drilling data for each core: pump(s) used, mud pumped, strokes, shear pins/pressure, bit size/rotation, weight on bit, top drive torque, rate of penetration, core jams, winch and wirelines, core catcher/shoe and barrel, and whether core orientation, drillover, formation temperature, tracers, liners were used.
DOI: 10.5281/zenodo.7705476
title: IODP Expedition 385 Core drilling summary

description: Report includes detailed drilling data for each core: pump(s) used, mud pumped, strokes, shear pins/pressure, bit size/rotation, weight on bit, top drive torque, rate of penetration, core jams, winch and wirelines, core catcher/shoe and barrel, and whether core orientation, drillover, formation temperature, tracers, liners were used.
DOI: 10.5281/zenodo.6461729
title: Accuracy of COVID-19 relevant knowledge among youth: Number of information sources matters

description: Dataset for manuscript: <strong>Accuracy of COVID-19 relevant knowledge among youth: Number of information sources matters </strong>
description: Funding: This study was supported by the 2020 National Science Foundation grant, RAPID DRL2028026: Using Popular Media to Educate Youth About the Biology of Viruses and the Current COVID-19 Pandemic (JD, JM, LVW, PWH) (nsf.gov). Parts of this publication were also supported by the National Institute of General Medical Sciences at the National Institutes of Health under award R25GM129836 (JM, PWH) (nihsepa.org). Any opinions, findings, or conclusions expressed in this material are those of the authors and do not necessarily reflect the views of the National Science Foundation or the National Institutes of Health. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
DOI: 10.5281/zenodo.6461728
title: Accuracy of COVID-19 relevant knowledge among youth: Number of information sources matters

description: Dataset for manuscript: <strong>Accuracy of COVID-19 relevant knowledge among youth: Number of information sources matters </strong>
description: Funding: This study was supported by the 2020 National Science Foundation grant, RAPID DRL2028026: Using Popular Media to Educate Youth About the Biology of Viruses and the Current COVID-19 Pandemic (JD, JM, LVW, PWH) (nsf.gov). Parts of this publication were also supported by the National Institute of General Medical Sciences at the National Institutes of Health under award R25GM129836 (JM, PWH) (nihsepa.org). Any opinions, findings, or conclusions expressed in this material are those of the authors and do not necessarily reflect the views of the National Science Foundation or the National Institutes of Health. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
DOI: 10.6084/m9.figshare.21648170
title: Table 5.4

description: <strong>Table 5.4: Information about all GE datasets used in Chapter 5.</strong> “Factor1 GE” sheet contains Ensembl ID, gene name and cRPM across different tissues for the 39 genes plotted in Fig. 5.5C. The second sheet includes Ensembl ID, gene name and cRPM across different tissues for the Olfactory-Sperm dataset genes. The last three sheets contain Ensemble ID and gene name for spermatocytes-specific, olfactory-specific and cilia genes respectively. Details on the definition of specific gene sets is available in chapter 5.7.2.
DOI: 10.6084/m9.figshare.21648170.v2
title: Table 5.4

description: <strong>Table 5.4: Information about all GE datasets used in Chapter 5.</strong> “Factor1 GE” sheet contains Ensembl ID, gene name and cRPM across different tissues for the 39 genes plotted in Fig. 5.5C. The second sheet includes Ensembl ID, gene name and cRPM across different tissues for the Olfactory-Sperm dataset genes. The last three sheets contain Ensemble ID and gene name for spermatocytes-specific, olfactory-specific and cilia genes respectively. Details on the definition of specific gene sets is available in chapter 5.7.2.
DOI: 10.6084/m9.figshare.21648170.v1
title: Table 5.4

description: <strong>Table 5.4: Information about all GE datasets used in Chapter 5.</strong> “Factor1 GE” sheet contains Ensembl ID, gene name and cRPM across different tissues for the 39 genes plotted in Fig. 5.5C. The second sheet includes Ensembl ID, gene name and cRPM across different tissues for the Olfactory-Sperm dataset genes. The last three sheets contain Ensemble ID and gene name for spermatocytes-specific, olfactory-specific and cilia genes respectively. Details on the definition of specific gene sets is available in chapter 5.7.2.
DOI: 10.5281/zenodo.7705481
title: IODP Expedition 385 Section summary

description: Report includes data for individual core sections: coring/drilling depths and recovery, database identifiers for the whole section and section halves, and number of samples taken from the section before and after splitting.
DOI: 10.5281/zenodo.7705480
title: IODP Expedition 385 Section summary

description: Report includes data for individual core sections: coring/drilling depths and recovery, database identifiers for the whole section and section halves, and number of samples taken from the section before and after splitting.
DOI: 10.6084/m9.figshare.21667757
title: Table 5.8

description: <strong>Table 5.8: Source data for Rfx1/2/3 KO analysis.</strong> GE datasets for WT and Rfx1/2/3 KO ependymal cells. Each sheet contains Ensembl ID, gene symbol, expression levels (cRPKM) for Olfactory-Sperm dataset, spermatocytes-specific genes, olfactory-specific genes and cilia genes.
DOI: 10.6084/m9.figshare.21667757.v2
title: Table 5.7

description: <strong>Table 5.7: Source data for Rfx1/2/3 KO analysis.</strong> GE datasets for WT and Rfx1/2/3 KO ependymal cells. Each sheet contains Ensembl ID, gene symbol, expression levels (cRPKM) for Olfactory-Sperm dataset, spermatocytes-specific genes, olfactory-specific genes and cilia genes.
DOI: 10.5281/zenodo.7705485
title: IODP Expedition 385 P-wave velocity bayonet (section)

description: P-wave velocity data were measured on undisturbed section halves using pairs of piezoelectric transducers mounted in bayonets that are inserted into soft sediment along the JRSO-defined y-axis and/or z-axis. Report includes P-wave velocity in y and/or z direction, bayonet separation, traveltime between transducers, and first arrival picks.
DOI: 10.5281/zenodo.7705484
title: IODP Expedition 385 P-wave velocity bayonet (section)

description: P-wave velocity data were measured on undisturbed section halves using pairs of piezoelectric transducers mounted in bayonets that are inserted into soft sediment along the JRSO-defined y-axis and/or z-axis. Report includes P-wave velocity in y and/or z direction, bayonet separation, traveltime between transducers, and first arrival picks.
DOI: 10.6084/m9.figshare.22227592
title: Table 5.7

description: The table includes the TFs whose consensus sequences are enriched in the promoter of mouse SpO genes. For each TF, name, consensus sequence, P-value and log10(P-values) are shown.
DOI: 10.6084/m9.figshare.22227592.v1
title: Table 5.7

description: The table includes the TFs whose consensus sequences are enriched in the promoter of mouse SpO genes. For each TF, name, consensus sequence, P-value and log10(P-values) are shown.
DOI: 10.5281/zenodo.7705491
title: IODP Expedition 385 P-wave velocity caliper (section/discrete)

description: P-wave velocity data were measured on undisturbed section halves (JRSO-defined x-axis) and/or discrete cube and cylinder samples (x, y, or z-axis) using pairs of piezoelectric transducers mounted on a caliper system. Report includes P-wave velocity in x, y, and/or z-direction, caliper separation, traveltime between transucers, and first arrival picks.
DOI: 10.5281/zenodo.7705490
title: IODP Expedition 385 P-wave velocity caliper (section/discrete)

description: P-wave velocity data were measured on undisturbed section halves (JRSO-defined x-axis) and/or discrete cube and cylinder samples (x, y, or z-axis) using pairs of piezoelectric transducers mounted on a caliper system. Report includes P-wave velocity in x, y, and/or z-direction, caliper separation, traveltime between transucers, and first arrival picks.
DOI: 10.6084/m9.figshare.22227601
title: Table 5.9

description: Ensembl ID, gene name and cRPM across different tissues is provided for human and zebrafish SpO gene orthologous and Rfx paralogs.
DOI: 10.6084/m9.figshare.22227601.v1
title: Table 5.9

description: Ensembl ID, gene name and cRPM across different tissues is provided for human and zebrafish SpO gene orthologous and Rfx paralogs.
DOI: 10.5281/zenodo.7705495
title: IODP Expedition 385 P-wave velocity logger (whole round)

description: P-wave velocity data were measured on whole-round sections on the Whole-Round Multisensor Logger (WRMSL) using pairs of piezoelectric transducers mounted on a caliper system. Measurements may be affected by degassing of pore fluid and microfracturing during core recovery. Report includes P-wave velocity in x-y plane and distance and traveltime between transducers.
DOI: 10.5281/zenodo.7705494
title: IODP Expedition 385 P-wave velocity logger (whole round)

description: P-wave velocity data were measured on whole-round sections on the Whole-Round Multisensor Logger (WRMSL) using pairs of piezoelectric transducers mounted on a caliper system. Measurements may be affected by degassing of pore fluid and microfracturing during core recovery. Report includes P-wave velocity in x-y plane and distance and traveltime between transducers.
DOI: 10.6084/m9.figshare.22078487
title: Dataset of Psychosocial well-being needs of alcohol/drug sufferers and therapeutic architectural solutions in rehabilitation centre, Nigeria: a cross-sectional study

description: The study is a case study of four rehabilitation centres in Nigeria’s busiest cities; Lagos, Abuja, Port Harcourt, and Enugu. The authors collected data via survey questionnaires, an in-depth interview guide, an observation guide, and a checklist of TACs in a healthcare facility. The authors interviewed twelve selected sufferers and specialists from the four (4) rehabilitation centres and Three (3) interviewees from each of the rehabilitation facilities (The 12 participants were purposively selected from the four (4) randomly selected rehabilitation facilities in the four busiest cities (Lagos, Abuja, Port-Harcourt and Enugu) across four (south-west, north-central, south-south and south-east) of the six geopolitical zones in Nigeria. The authors selected 3 out of the 12 participants from the four facilities. The three participants comprised: 1. the chief consultant, 2. a specialist nurse and 3. an alcohol drug sufferer (ADS). Therefore, three from ADRS-RC, Lagos, three (3) from NLSHRC, Abuja, three (3) from 180DC, Port Harcourt and three (3) from NPHS, Enugu total of 12 participants). Also, the study used observation guides and checklists to record data on the available TACs in the four facilities that influence the patient's psychosocial well-being. The authors used a semi-structured questionnaire to identify the psychosocial well-being needs (PWNs) of ADSs. The breakdown of the number of questionnaires administered and the responses are in table 1. The authors designed these questionnaires to be completed by the patients (ADSs). Four research assistants undertook the data gathering process for twelve weeks during the morning and evening, during weekends (Fridays to Sundays). Data collection started on July 15 and ended on September 30, 2022.
DOI: 10.5287/ora-ko7q2nq66
title: Monocyte gene expression data

description: Untreated primary monocytes were prepared from 174 healthy individuals of Northern European (British) ancestry recruited via the Oxford biobank. Poly-A RNA was paired-end 100bp sequenced in the Oxford Genome Centre using Illumina Hiseq-4000 machines (median = 47,735,438 reads per sample). Reads were aligned to CRGh38/hg38 using HISAT2 with default parameters. High mapping quality reads were selected based on MAPQ score using bamtools. Duplicate reads were marked and removed using picard (v 1.105). samtools was used to pass through the mapped reads and calculate statistics. Sample contamination and swaps were detected by comparing the imputed SNP-array genotypes with genotypes called from RNA-seq using verifyBamID. Genotyping was performed with Illumina HumanOmniExpress with coverage of 733,202 separate markers. Genotypes were pre-phased with SHAPEIT2, and missing genotypes were imputed with PBWT. Poly-A RNA was paired-end sequenced in the Oxford Genome Centre using Illumina Hiseq-4000 machines. The data consists of gene level count data from mapped transcriptomes prepared with HT-seq.
DOI: 10.6084/m9.figshare.21895206.v1
title: Supplementary Material for: The Dynamic Interplay of Objective and Subjective Balance and Subsequent Task Performance: Implications for Fall Risk in Older Adults

description: Introduction. Falls occur in daily life when an activity results in a loss of balance that is too great to recover from. Our purpose in this study was to examine how fall risk differentiates the dynamic interplay of objective and subjective balance on a given day and subsequent task performance on that day. Methods. For 30 consecutive days, following a baseline fall risk assessment, 41 older adults (56% female, Age M = 75.22, SD = 6.75) self-assessed balance and task performance using a smartphone. The Activity-specific Balance Confidence scale measured subjective balance. Postural sway and chair-stand performance were measured within a smartphone using accelerometry. Data were analyzed using multilevel random coefficient models. Results. Tests of heterogeneity in level one residuals showed day-to-day variability in balance confidence and postural sway to be greater in individuals with higher fall risk at baseline. Baseline fall risk differentiated how the interplay of balance confidence and postural sway on a given day related to chair-stand performance on that day. For those with higher fall risk, on days that balance confidence was higher, greater postural sway was followed by greater chair-stand performance. Discussion / Conclusion. Findings indicate that older adults, especially those with higher fall risk, may be unaware of subtle fluctuations in balance, which could lead to engaging in activities that exceed the capacity to maintain balance at that moment. Fall prevention efforts should address older adults’ understanding of and responses to fluctuations of physical function in daily life.
DOI: 10.5066/p9giysmv
title: Saskatchewan Ministry of Energy and Resources Reservoir Data (1963 - 1998)

description: Saskatchewan Ministry of Energy and Resources Reservoir Data (1963 ? 1998) was obtained from the Saskatchewan Ministry of Energy and Resources in 2000 and was used in a historical and potential reserve growth study completed by Mahendra Verma and Mitchell Henry, U.S. Geological Survey. It is a collection of manually entered historical oil and gas reservoir data from 1963 ? 1983, and digital copies of historical oil and gas reservoir data from the period of 1984 ? 1998. The database was assembled from an Excel spreadsheet initially, then normalized and formatted in Microsoft Access as three separate tables of data (saskatch_reservoir_dissolved, saskatch_reservoir_gas, saskatch_reservoir_oil) ?Historical and Potential Reserve Growth in Oil and Gas Pools in Saskatchewan" Mahendra K. Verma and Mitchell E. (2004) Database Details Historical oil and gas data: 1963-1998 Hard Copy: 1963-1983 (manually entered) Digital data: 1984-1998 (digitally transformed from floppy disk files) Data Format: 1963-1977: American oilfield units 1978-1998: Metric units Retained all data; converted to oilfield units
DOI: 10.5519/qd.tyaqb958
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (821713 records)
DOI: 10.7284/152343
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise LMG1510 using a SeaBird SBE-911+ instrument system onboard the platform RV Laurence M. Gould

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.5066/p94o5xpu
title: Maine StreamStats Foundation Data Layers

description: The U.S. Geological Survey (USGS), in cooperation with Maine Department of Transportation, has compiled a series of GIS datasets to be implemented into the USGS StreamStats application for the State of Maine.These data were compiled from the high-resolution National Hydrography Dataset (NHD) and the Maine Lidar-Derived Watersheds (Sturtevant and Schoen, 2022). By using these datasets users will be able to delineate watersheds with the StreamStats application more accurately than previously possible. The datasets are provided in five separate child items. Reference: Sturtevant, L. P., and Schoen, A. L., 2022, Maine lidar-derived watersheds: U.S. Geological Survey data release, https://doi.org/10.5066/P9FL6ENJ. �
DOI: 10.7284/152344
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise LMG9902 using a SeaBird SBE-911+ instrument system onboard the platform RV Laurence M. Gould

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.5281/zenodo.7014776
title: Mice MR Images (lungs and pulmonary metastases)

description: 55 mice were imaged after injection on a 7T Bruker BioSpec system equipped with a gradient coil of 660 mT/m maximum strength and 110 μs rise time. 27 mice with Crispr/Cas9 il34 KO gene and 28 controls. Animals were imaged every week: from day 6 to day 32 post-implantation for control mice and from day 8 till their condition deteriorated (up to day 141 at most) for il34 mice. Two additional healthy mice were scanned 3 times, two times without repositioning and one time after waking them up in order to evaluate the reproducibility of the lungs’ segmentations. The balanced Steady State Free Precession (bSSFP) sequence was chosen, as it has previously been shown that high tumor contrast can be obtained in the brain and in the liver (https://doi.org/10.1002/jmri.21449 ; https://doi.org/10.1002/jmri.22593 ; https://doi.org/10.1002/jmri.24688). Combined with the Self-Gating (SG) method, it enables to delete echoes affected by motion and consequently obtain abdominal images without motion artifact (https://doi.org/10.1002/jmri.24688). Corresponding masks were manually drawn around the lungs on every slice of 185 3D images; masks were manually drawn around the pulmonary metastases on every slice of 62 3D images containing metastases. Both tasks were performed by two different investigators. Link to the code : https://github.com/cbib/DeepMeta
DOI: 10.5281/zenodo.5806242
title: Mice MR Images (lungs and pulmonary metastases)

description: 55 mice were imaged after injection on a 7T Bruker BioSpec system equipped with a gradient coil of 660 mT/m maximum strength and 110 μs rise time. 27 mice with Crispr/Cas9 il34 KO gene and 28 controls. Animals were imaged every week: from day 6 to day 32 post-implantation for control mice and from day 8 till their condition deteriorated (up to day 141 at most) for il34 mice. Two additional healthy mice were scanned 3 times, two times without repositioning and one time after waking them up in order to evaluate the reproducibility of the lungs’ segmentations. The balanced Steady State Free Precession (bSSFP) sequence was chosen, as it has previously been shown that high tumor contrast can be obtained in the brain and in the liver (https://doi.org/10.1002/jmri.21449 ; https://doi.org/10.1002/jmri.22593 ; https://doi.org/10.1002/jmri.24688). Combined with the Self-Gating (SG) method, it enables to delete echoes affected by motion and consequently obtain abdominal images without motion artifact (https://doi.org/10.1002/jmri.24688). Corresponding masks were manually drawn around the lungs on every slice of 185 3D images; masks were manually drawn around the pulmonary metastases on every slice of 62 3D images containing metastases. Both tasks were performed by two different investigators. Link to the code : https://github.com/cbib/DeepMeta