cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.fsw8bx
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis rodolfovasquezii L.Valenz. & Villalba"
 ]
}

 The dataset includes 67 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019062-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25838197
title: Leao et al., 2024 - Supplementary Data

description: Supplementary information of paper <b>"Asgard archaea defense systems and their roles in the origin of eukaryotic immunity"</b> by Pedro Leão, Mary E. Little, Kathryn E. Appler, Daphne Sahaya, Emily Aguilar-Pine, Kathryn Currie, Ilya J. Finkelstein, Valerie De Anda and Brett J. BakerSupplementary Data 1 - DefenseFinder output, and descriptive statistics of each dataset analyzed in Leão et al., 2024Supplementary Data 2 - Information regarding the asVip expression experiment presented in Leão et al., 2024Supplementary Data 3 - General information and alignments of the protein structures used in Leão et al., 2024Supplementary Data 4 - Mapping files of the phylogenetic trees presented in Leão et al., 2024Supplementary Data 5 - Sequence and structural alignments used to generate the data presented in Leão et al., 2024Supplementary Information - Phylogenetic analyses of Argonaute, NLR and Mokosh defence systems proteins across the tree of lifeAlignments - Alignments used to generate the phylogenetic trees presented in this manuscriptPublication license for figure 4 in this manuscript.
DOI: 10.6084/m9.figshare.25838197.v2
title: Leao et al., 2024 - Supplementary Data

description: Supplementary information of paper <b>"Asgard archaea defense systems and their roles in the origin of eukaryotic immunity"</b> by Pedro Leão, Mary E. Little, Kathryn E. Appler, Daphne Sahaya, Emily Aguilar-Pine, Kathryn Currie, Ilya J. Finkelstein, Valerie De Anda and Brett J. BakerSupplementary Data 1 - DefenseFinder output, and descriptive statistics of each dataset analyzed in Leão et al., 2024Supplementary Data 2 - Information regarding the asVip expression experiment presented in Leão et al., 2024Supplementary Data 3 - General information and alignments of the protein structures used in Leão et al., 2024Supplementary Data 4 - Mapping files of the phylogenetic trees presented in Leão et al., 2024Supplementary Data 5 - Sequence and structural alignments used to generate the data presented in Leão et al., 2024Supplementary Information - Phylogenetic analyses of Argonaute, NLR and Mokosh defence systems proteins across the tree of lifeAlignments - Alignments used to generate the phylogenetic trees presented in this manuscriptPublication license for figure 4 in this manuscript.
DOI: 10.5281/zenodo.12675849
title: Replication Package for: "Agricultural Technological Change, Female Earnings, and Fertility: Evidence from Brazil"

description: Moorthy, Vivek 2024. "Agricultural Technological Change, Female Earnings, and Fertility: Evidence from Brazil." The Economic Journal.
DOI: 10.5281/zenodo.12675850
title: Replication Package for: "Agricultural Technological Change, Female Earnings, and Fertility: Evidence from Brazil"

description: Moorthy, Vivek 2024. "Agricultural Technological Change, Female Earnings, and Fertility: Evidence from Brazil." The Economic Journal.
DOI: 10.5281/zenodo.12703879
title: Continuous phylogeography analysis of Rift Valley fever virus (RVFV) in Africa and the Arabian Peninsula

description: Spatiotemporal-explicit Bayesian phylogenetic trees and MCMC log files for Rift Valley fever virus large, medium and non-structural genetic sequences generated by BEAST v1.10



Log files (logs.zip)

Tree files (trees.zip)
DOI: 10.5281/zenodo.12703880
title: Continuous phylogeography analysis of Rift Valley fever virus (RVFV) in Africa and the Arabian Peninsula

description: Spatiotemporal-explicit Bayesian phylogenetic trees and MCMC log files for Rift Valley fever virus large, medium and non-structural genetic sequences generated by BEAST v1.10



Log files (logs.zip)

Tree files (trees.zip)
DOI: 10.15468/dl.h6ncsn
title: Occurrence Download

description: A dataset containing 3513 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crotonogyne Müll.Arg."
 ]
}

 The dataset includes 3513 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019063-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8pwew
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material sample)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis serrata Pilg."
 ]
}

 The dataset includes 30 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019064-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14469/hpc/11417
title: Primary crystal structure data for Compound 42. Bis(ethanol) bis((4-(ethoxycarbonyl)-1-phenyl-1H-pyrazol-5-yl)oxy)manganese (42)
DOI: 10.5281/zenodo.12704411
title: Data and code used for 'Thigh-Worn Accelerometry: A Comparative Study of Two No-Code Classification Methods for Identifying Physical Activity Types'

description: This repository contains all data necessary to reproduce the results for the manuscript titled 'Thigh-Worn Accelerometry: A Comparative Study of Two No-Code Classification Methods for Identifying Physical Activity Types'.

 

File structure

- analysis

The analysis subfolder contains all R scripts used for the study:

1. Sample size estimation2. Synchronisation of the timestamps3. Processing of the raw data4. Calculating the interrater agreement5. Calculating all performance metrics and producing the plots

In addition, the two subfolders contain the plots and result tables produced when running the scripts.

 

- data

The data folder contains all raw data as well as the processed data. A subfolder for each subject contains the video annotations (.eaf), the raw acceleration data (.csv) and the SENS motion classification data (.csv).

The ActiPASS subfolder contains the raw acceleration files in binary file format as well as the ActiPASS output.

The shiny subfolder contains the R code used for running the shiny app during data collection as well as the logged data and timestamps.

 

- documents

This folder contains any additional documents used in the study.

 

Requirements

The data processing and analysis was performed in R (Version 4.3.2). To run the full analysis in R, the following packages need to be installed:



tidyverse

xml2

lubridate

here

dygraphs

hms

irr

yardstick

cowplot

gt
DOI: 10.5281/zenodo.12704412
title: Data and code used for 'Thigh-Worn Accelerometry: A Comparative Study of Two No-Code Classification Methods for Identifying Physical Activity Types'

description: This repository contains all data necessary to reproduce the results for the manuscript titled 'Thigh-Worn Accelerometry: A Comparative Study of Two No-Code Classification Methods for Identifying Physical Activity Types'.

 

File structure

- analysis

The analysis subfolder contains all R scripts used for the study:

1. Sample size estimation2. Synchronisation of the timestamps3. Processing of the raw data4. Calculating the interrater agreement5. Calculating all performance metrics and producing the plots

In addition, the two subfolders contain the plots and result tables produced when running the scripts.

 

- data

The data folder contains all raw data as well as the processed data. A subfolder for each subject contains the video annotations (.eaf), the raw acceleration data (.csv) and the SENS motion classification data (.csv).

The ActiPASS subfolder contains the raw acceleration files in binary file format as well as the ActiPASS output.

The shiny subfolder contains the R code used for running the shiny app during data collection as well as the logged data and timestamps.

 

- documents

This folder contains any additional documents used in the study.

 

Requirements

The data processing and analysis was performed in R (Version 4.3.2). To run the full analysis in R, the following packages need to be installed:



tidyverse

xml2

lubridate

here

dygraphs

hms

irr

yardstick

cowplot

gt
DOI: 10.15468/dl.uttsad
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis argentea T.Boza & H.R.Quispe"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019065-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tumskh
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material sample)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis canoi W.Mend."
 ]
}

 The dataset includes 94 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019066-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.32mwaa
title: Occurrence Download

description: A dataset containing 439 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus merkusii Jungh. & de Vriese"
 ]
}

 The dataset includes 439 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019067-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8hzsm8
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material sample)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Polylepis loxensis T.Boza, Romol. & M.Kessler, Polylepis canoi W.Mend.)"
 ]
}

 The dataset includes 110 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019068-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5m5yrr
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis humboldtii T.Boza, Romol. & M.Kessler"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019069-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14469/hpc/11419
title: Primary crystal structure data for sample Compound 49. ((4-(Ethoxycarbonyl)-1-(4-methoxybenzyl)-1H-pyrazol-5-yl)oxy)zinc polymer
DOI: 10.5517/ccdc.csd.cc2d6qdr
title: CCDC 2210994: Experimental Crystal Structure Determination

description: Related Article: Thomas Mies, Andrew J. P. White, Henry S. Rzepa, Luciano Barluzzi, Mohit Devgan, Richard A. Layfield, Anthony G. M. Barrett|2023|Inorg.Chem.|62|13253|doi:10.1021/acs.inorgchem.3c01506
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.14469/hpc/11420
title: Primary crystal structure data for Compound 50. Bis(ethanol) bis((4-(ethoxycarbonyl)-1-phenyl-1H-pyrazol-5-yl)oxy)zinc
DOI: 10.14469/hpc/11421
title: Primary crystal structure data for Compound 53. Bis(ethanol) bis((4-(ethoxycarbonyl)-1-(4-methoxybenzyl)-1H-pyrazol-5-yl)oxy)copper
DOI: 10.5517/ccdc.csd.cc2d6qkx
title: CCDC 2210999: Experimental Crystal Structure Determination

description: Related Article: Thomas Mies, Andrew J. P. White, Henry S. Rzepa, Luciano Barluzzi, Mohit Devgan, Richard A. Layfield, Anthony G. M. Barrett|2023|Inorg.Chem.|62|13253|doi:10.1021/acs.inorgchem.3c01506
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.cfkwyv
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis occidentalis T.Boza & M.Kessler"
 ]
}

 The dataset includes 14 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019070-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3t338d
title: Occurrence Download

description: A dataset containing 439 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus merkusii Jungh. & de Vriese"
 ]
}

 The dataset includes 439 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019071-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7285pd
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material sample)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis quadrijuga Bitter"
 ]
}

 The dataset includes 82 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019073-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10013835
title: Freshly-developed Low-latitude Postmidnight-to-Dawn F-region Ionospheric Irregularities over China on November 13, 2015

description: The dataset reports the calculated slant Total Electron Content (STEC) from 4 GPS receivers came from the Crustal Movement Observation Network of China on 13 November 2015. The temporal resolution of data is thirty seconds.
DOI: 10.5517/ccdc.csd.cc2d6qly
title: CCDC 2211000: Experimental Crystal Structure Determination

description: Related Article: Thomas Mies, Andrew J. P. White, Henry S. Rzepa, Luciano Barluzzi, Mohit Devgan, Richard A. Layfield, Anthony G. M. Barrett|2023|Inorg.Chem.|62|13253|doi:10.1021/acs.inorgchem.3c01506
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.14469/hpc/11422
title: Primary crystal structure data for Compound 54. Bis((4-(ethoxycarbonyl)-1-phenyl-1H-pyrazol-5-yl)oxy)copper polymer
DOI: 10.15468/dl.kpda7d
title: Occurrence Download

description: A dataset containing 2559 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Solidago elongata Nutt., Solidago elongata var. elongata, Solidago canadensis var. elongata (Nutt.) M.Peck, Solidago elongata var. microcephala Kellogg, Solidago lepida var. elongata (Nutt.) Fernald, Solidago canadensis subsp. elongata (Fernald) D.D.Keck)"
 ]
}

 The dataset includes 2559 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019072-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/62213
title: Chandra X-ray Observatory ObsId 62213
DOI: 10.15468/dl.tyabts
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis simpsoniae T.Boza & M.Kessler"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019075-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b56k92
title: Occurrence Download

description: A dataset containing 314 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material sample)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polylepis reticulata Hieron."
 ]
}

 The dataset includes 314 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019076-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14469/hpc/11423
title: Primary crystal structure data for Compound 55. Bis(ethanol) bis((4-benzoyl-1-(4-methoxybenzyl)-1H-pyrazol-5-yl)oxy)copper
DOI: 10.5517/ccdc.csd.cc2d6qmz
title: CCDC 2211001: Experimental Crystal Structure Determination

description: Related Article: Thomas Mies, Andrew J. P. White, Henry S. Rzepa, Luciano Barluzzi, Mohit Devgan, Richard A. Layfield, Anthony G. M. Barrett|2023|Inorg.Chem.|62|13253|doi:10.1021/acs.inorgchem.3c01506
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5258/soton/d3119
title: Data supporting the publication "Single-cell high precision ablation using nanosecond-pulsed thulium-doped fiber laser"

description: This dataset contains all the raw data for the "Single-cell high precision ablation using nanosecond-pulsed thulium-doped fiber laser" manuscript published in Optical Engineering. 

This dataset contains single cell paper Primary Dataset.xlsx. The dataset shows raw data that was used to create the graphs in the manuscript. 
All that's needed to interpret the data is Microsoft Excel. It can be graphed and compared to the data in the manuscript.
DOI: 10.6084/m9.figshare.26233508
title: Micronutrientsaredriversofabundance,richnessandcompositionofsoilinsectcommunitiesintropicalrainforests

description: Communities of soil insects in tropical rainforests are among the richest and most complex, but the mechanisms structuring them remain mostly unknown. Identifying whether nutrient availability plays a relevant role in the assembly of these communities poses several challenges due to the diverse nutritional requirements of insects. We investigated the importance of nutrient availability in accounting for the abundance, richness and composition of soil-insect communities in two tropical rainforests. We sampled soil insects 72 one square-meter sampling points across three topographic levels at two sites in French Guiana, counted all specimens and characterized each assemblage using DNA metabarcoding. We then determined the importance of nutrient availability by measuring 19 nutrient concentrations and ratios from pools of litter and topsoil.We collected 18,000 specimens from 17 different orders.Despite an extraordinary diversity and spatial heterogeneity, the concentrations of sodium (Na), potassium (K), magnesium (Mg) and calcium (Ca) positively correlated with either the abundance or the richness of the communities. We found similar relationships when analyzing the data separately for Blattodea, Coleoptera, Hymenoptera and Orthoptera, the most abundant insect orders with the most OTUs. These micronutrients were also important predictors of the composition of the assemblages. We did not find effects for nitrogen or phosphorus, and only the concentration of carbon in the litter strongly influenced the compositions of the hymenopteran and orthopteran communities. This lack of effect indicated that the availability of macronutrients was not a relevant driver of the communities in tropical rainforests as it is for plants and microbes, in contrast to micronutrients.Our results demonstrated that the availability of micronutrients played a large role in species selection during the assembly of the soil-insect communities in these tropical rainforests.The high unexplained variance, however, suggests that additional neutral and niche deterministic processes, such as stochastic population drift and biotic interactions, likely play complementary roles in structuring insect communities in the soils of tropical rainforests.