cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17863/cam.14526
title: Data for Table 4.31. Complete profile.

description: Data for Table 4.31. Complete profile. Data as published.
DOI: 10.17863/cam.14542
title: Thwing resistance raster south of the pond in Chapel Field.

description: Thwing pottery primary data table. Most tables in the text can be derived from these data. See notes for further information.
DOI: 10.17863/cam.14541
title: Thwing pottery primary data table

description: Thwing pottery dating table 3. Illus. 4.24, based on decades of date ranges, are based on these data.
DOI: 10.17863/cam.14543
title: Thwing, East Yorkshire, Geophysical Survey Report, 2004 – 2006

description: List of samian sherds found during excavation
DOI: 10.17863/cam.14540
title: Thwing pottery dating table 3

description: Thwing pottery dating table 2. Illus. 4.21, based on decades of date ranges, are based on these data.
DOI: 10.17863/cam.14547
title: Data for graph Illus. 4.26. Date distribution of Phase 3b pottery with a restricted date range of less than 200 years shown by rim equivalents.

description: Data for graph Illus. 4.26. Date distribution of Phase 3b pottery with a restricted date range of less than 200 years shown by rim equivalents.
DOI: 10.17863/cam.14548
title: Data for graph Illus. 4.27.Date distribution of Phase 3d pottery with a restricted date range of less than 200 years shown by rim equivalents.

description: Data for graph Illus. 4.27.Date distribution of Phase 3d pottery with a restricted date range of less than 200 years shown by rim equivalents.
DOI: 10.17863/cam.14539
title: Data for graph Illus. 4.21 Date distribution of entire assemblage shown by percentage of rim equivalents.

description: Data for graph Illus. 4.21 Date distribution of entire assemblage shown by percentage of rim equivalents. Spreadsheet also provides the same by minimum number of vessels.
DOI: 10.17863/cam.14549
title: Data for: Deposition of iron nails recovered during excavation, by Phase and Distributions of different nail types (those nails with coordinates recorded with total station).

description: Iron nails identifications, contextual information, and findspots, where recorded.
DOI: 10.17863/cam.14508
title: Data for graph Illus. 4.31. Pottery deposition patterns in different context types (for comparison with Hayton/Shiptonthorpe) by Phase, shown by relative frequencies of sherds.

description: Data for graph Illus. 4.31. Pottery deposition patterns in different context types (for comparison with Hayton/Shiptonthorpe) by Phase, shown by relative frequencies of sherds. Context types used are those in common with Hayton and Shiptonthorpe publications.
DOI: 10.17863/cam.14603
title: Data for Table 6.26. Iron oxide concretions, [59] &lt;2&gt;: normalised average SEM-EDS data from the bulk analysis of two concretions thought to be iron oxides.

description: Data for Table 6.26. Iron oxide concretions, [59] &lt;2&gt;: normalised average SEM-EDS data from the bulk analysis of two concretions thought to be iron oxides.
DOI: 10.17863/cam.14604
title: Data for Table 6.29. Iron oxide scale, [59] &lt;2&gt;: normalised average SEM-EDS data from the bulk analysis of three areas across the scale fragment.

description: Data for Table 6.29. Iron oxide scale, [59] &lt;2&gt;: normalised average SEM-EDS data from the bulk analysis of three areas across the scale fragment.
DOI: 10.17863/cam.14602
title: Data for Table 6.25. Vitrified lump 3, [276] &lt;72&gt;: normalised average SEM-EDS data from the bulk analysis of the glassy matrix from two different areas across the sample.

description: Data for Table 6.25. Vitrified lump 3, [276] &lt;72&gt;: normalised average SEM-EDS data from the bulk analysis of the glassy matrix from two different areas across the sample.
DOI: 10.17863/cam.14606
title: Data for: Box plots of diversity scores for building interior and exterior.

description: Data table for publication Illus. 6.13. Box plots of diversity scores for building interior and exterior.
DOI: 10.17863/cam.14605
title: Data for: Box plots of diversity scores across all phases.

description: Data table for publication Illus. 6.12. Box plots of diversity scores across all phases.
DOI: 10.17863/cam.14601
title: Data for Table 6.12. Summary of charcoal results.

description: Data for Table 6.12. Summary of charcoal results.
DOI: 10.17863/cam.14607
title: Data for: Charcoal types by Phase

description: Data table for publication Illus. 6.10. Charcoal types by Phase.
DOI: 10.17863/cam.14652
title: Data for Table 6.23. Vitrified lump 1, [177]&lt;51&gt;: normalised average SEM-EDS data from the bulk analysis of the glassy matrix from different areas across the sample.

description: Data for Table 6.23. Vitrified lump 1, [177]&lt;51&gt;: normalised average SEM-EDS data from the bulk analysis of the glassy matrix from different areas across the sample.
DOI: 10.17863/cam.14653
title: Data for Table 6.24. Vitrified lump 2, [194]: normalised average SEM-EDS data from the bulk analysis of the glassy matrix from different areas across the sample.

description: Data for Table 6.24. Vitrified lump 2, [194]: normalised average SEM-EDS data from the bulk analysis of the glassy matrix from different areas across the sample.
DOI: 10.17863/cam.14651
title: Data for Table 6.22. Results from precision and accuracy tests performed on seven reference materials.

description: Data for Table 6.22. Results from precision and accuracy tests performed on seven reference materials.
DOI: 10.17863/cam.14650
title: Data for Table 6.20. Cepea nemoralis (L) quantities and context types.

description: Data for Table 6.20. Cepea nemoralis (L) quantities and context types.
DOI: 10.17863/cam.14645
title: Data for Table 6.17. Shell size (mm), average measurements in each Phase.

description: Data for Table 6.17. Shell size (mm), average measurements in each Phase.
DOI: 10.17863/cam.14612
title: Data for Table 6.13. Abundant or frequent wild plant seeds and their present-day ecology (from the 13 samples with more than 40 macrofossils).

description: Data for Table 6.13. Abundant or frequent wild plant seeds and their present-day ecology (from the 13 samples with more than 40 macrofossils).
DOI: 10.17863/cam.14613
title: Data for: Table 6.18. Shell weight (g) by general context type and Phase.

description: Data for: Table 6.18. Shell weight (g) by general context type and Phase.
DOI: 10.17863/cam.14619
title: Marine and freshwater molluscs data with contextual information

description: Data table of marine shells analysed by Eva Laurie, edited by Lacey Wallace and combined with contextual information
DOI: 10.17863/cam.14614
title: Environmental data appendix 1

description: Environmental data appendix 1
DOI: 10.17863/cam.14617
title: Environmental data appendix 4

description: Environmental data appendix 4
DOI: 10.17863/cam.14615
title: Environmental data appendix 2

description: Environmental data appendix 2
DOI: 10.17863/cam.14616
title: Environmental data appendix 3

description: Environmental data appendix 3
DOI: 10.17863/cam.14611
title: Data for: Table 6.14. Mollusca from bulk samples taken from Oven 3.1

description: Data for: Table 6.14. Mollusca from bulk samples taken from Oven 3.2 as it appears in the publication draft report.
DOI: 10.5519/qd.2j5r3uio
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4231 records)
DOI: 10.6084/m9.figshare.14068106.v1
title: Database of spectrograms of marine mammals

description: Spectrograms generated by the audio files of the website Watkins Marine Mammals Sound Database. Also, the experimental protocols used in the paper "On the Importance of Passive Acoustic Monitoring Filters".
DOI: 10.5519/qd.qtz3mq0e
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (12328 records)
DOI: 10.25345/c5p526
title: MassIVE MSV000087298 - The acyl-proteome of Syntrophus aciditrophicus reveals metabolic relationship with benzoate degradation
title: Syntrophus aciditrophicus is a model syntrophic bacterium that degrades fatty and aromatic acids into acetate, CO2, formate and H2 that are utilized by methanogens and other hydrogen-consuming microbes. The degradation of benzoate by S. aciditrophicus proceeds by a multi-step pathway that involves many reactive acyl-Coenzyme A species (RACS) as intermediates which can potentially result in acylation of lysine residues in proteins. Herein, we investigate post-translational modifications in the S. aciditrophicus proteome to identify and characterize a variety of acyl-lysine modifications that correspond to RACS present in the benzoate degradation pathway. Modification levels are sufficient to support post-translational modification analyses without antibody enrichment, enabling the study of a range of acylations located, presumably, on the most extensively acylated proteins. Seven types of acyl modifications were identified throughout the proteome, six of which correspond directly to RACS that are intermediates in the benzoate degradation pathway. Benzoate-degrading proteins are heavily represented among acylated proteins. The presence of functional deacylase enzymes in S. aciditrophicus indicates a potential regulatory system/mechanism by which these bacteria modulate acylation. Uniquely, acyl-lysine RACS are highly abundant in these syntrophic bacteria, raising the compelling possibility of enzyme modulation during benzoate degradation in this, and potentially, other syntrophic bacteria. Our results outline candidates to further study the impact of acylations within syntrophic systems.
DOI: 10.6084/m9.figshare.14479734
title: In vivo efficacy of 3D-printed elastin-gelatin-hyaluronic acid scaffolds for regeneration of nasal septal cartilage defects

description: The dataset in a SPSS file and interesting figures of method and materials
DOI: 10.6084/m9.figshare.14479734.v1
title: In vivo efficacy of 3D-printed elastin-gelatin-hyaluronic acid scaffolds for regeneration of nasal septal cartilage defects

description: The dataset in a SPSS file and interesting figures of method and materials
DOI: 10.5281/zenodo.4711247
title: TAMUdust2020 Database

description: This is a flexible user-friendly database for optical properties of dust aerosol and volcanic ash particles. Various ensembles of 20 irregular hexahedral particle models are applied in this database.
description: The instruction and description of the TAMUdust2020 database is available at https://sites.google.com/site/masanorisaitophd/data-and-resources/tamudust2020.
description: {"references": ["Saito, M., P. Yang, J. Ding, and X. Liu, A comprehensive database of the optical properties of irregular aerosol particles for radiative transfer simulations, J. Atmos. Sci., in press, https://doi.org/10.1175/JAS-D-20-0338.1."]}
DOI: 10.5281/zenodo.4711246
title: TAMUdust2020 Database

description: This is a flexible user-friendly database for optical properties of dust aerosol and volcanic ash particles. Various ensembles of 20 irregular hexahedral particle models are applied in this database.
description: The instruction and description of the TAMUdust2020 database is available at https://sites.google.com/site/masanorisaitophd/data-and-resources/tamudust2020.
description: {"references": ["Saito, M., P. Yang, J. Ding, and X. Liu, A comprehensive database of the optical properties of irregular aerosol particles for radiative transfer simulations, J. Atmos. Sci., in press, https://doi.org/10.1175/JAS-D-20-0338.1."]}
DOI: 10.6084/m9.figshare.14479746.v1
title: Antibiotic-resistance Assessment and Genes Prediction

description: A resistance assessment report and bioinformatic analysis of predicted resistance genes of <i>Staph. aureus </i>isolated from 18 Rubing cheese samples collected from local markets in Yunnan province, China between January to July 2019.
DOI: 10.6084/m9.figshare.14479746.v2
title: Antibiotic-resistance Assessment and Genes Prediction

description: A resistance assessment report and bioinformatic analysis of predicted resistance genes of <i>Staph. aureus </i>isolated from 18 Rubing cheese samples collected from local markets in Yunnan province, China between January to July 2019.
DOI: 10.6084/m9.figshare.14479746
title: Antibiotic-resistance Assessment and Genes Prediction

description: A resistance assessment report and bioinformatic analysis of predicted resistance genes of <i>Staph. aureus </i>isolated from 18 Rubing cheese samples collected from local markets in Yunnan province, China between January to July 2019.
DOI: 10.6084/m9.figshare.14479746.v4
title: Antibiotic-resistance Assessment and Genes Prediction

description: A resistance assessment report and bioinformatic analysis of predicted resistance genes of <i>Staph. aureus </i>isolated from 18 Rubing cheese samples collected from local markets in Yunnan province, China between January to July 2019.
DOI: 10.6084/m9.figshare.14479746.v3
title: Antibiotic-resistance Assessment and Genes Prediction

description: A resistance assessment report and bioinformatic analysis of predicted resistance genes of <i>Staph. aureus </i>isolated from 18 Rubing cheese samples collected from local markets in Yunnan province, China between January to July 2019.
DOI: 10.34740/kaggle/dsv/1799986
title: Causes of Death in Indonesia
DOI: 10.17632/3rgk37grsg.1
title: Data for: Identifying and modelling fugitive nickel dust emissions from a steelworks site in Sheffield, UK

description: Dataset for paper "Identifying and modelling fugitive nickel dust emissions from a steelworks site in Sheffield, UK"
DOI: 10.17632/3chygmtkmr.1
title: Data for: Physical and chemical aspects of the formation of unconformity-related hydrothermal vein type deposits in a continental basement setting (Schwarzwald, Germany) based on LA-ICP-MS analyses of single fluid inclusions in fluorite

description: Microthermometric, LA-ICP-MS and Raman analysis of selected unconformity related vein type hydrothermal mineral associations in the black forest.
DOI: 10.17632/2mzx2zg6ny.1
title: Data for: Lichen bioindicators of nitrogen and sulfur deposition in dry forests of Utah and New Mexico, USA

description: Co-located lichen and throughfall samples in Utah and New Mexico, USA. Lichen N and S concentrations are in %. Deposition is reported in kg/ha over the time periods from 2014-2018. There are open and throughfall collectors with N and S deposition as well as oxidized and reduced N.
DOI: 10.5281/zenodo.4718048
title: CoVaxxy Tweet IDs data set

description: A collection of Tweet IDs related to Covid-19 Vaccines, gathered from Twitter since Jan 4, 2021. Please see https://arxiv.org/abs/2101.07694 for more information.
DOI: 10.6084/m9.figshare.14479896
title: Classification parameters

description: Parameters
DOI: 10.6084/m9.figshare.14479896.v1
title: Classification parameters

description: Parameters
DOI: 10.6084/m9.figshare.13055615.v3
title: Urbanization and its impact on flood risk: The case of Addis Ababa, Ethiopia

description: Addis Ababa city rainfall raw data (1976-2016) acquired from Ethiopian meteorological agency<br>
DOI: 10.34740/kaggle/dsv/2156086
title: Causes of Death in Indonesia
DOI: 10.34740/kaggle/dsv/2156103
title: Causes of Death in Indonesia
DOI: 10.26036/cnp0001017
title: MiR-124 suppress the invasion and proliferation of breast cancer cells by targeting TFAP4

description: SKBR3 cells which were transfected with miR-124 or miR-NC for 48 hours. We performed RNA-seq to identified the miR-124 induced differential expression genes, and functional enrichment analysis was conducted to explore the target genes and involved pathways in breast cancer.
DOI: 10.6084/m9.figshare.14479920
title: Genome assembly and annotation of Yaluo

description: Genome assemble and annotation of Yaluo
DOI: 10.6084/m9.figshare.14479920.v1
title: Genome assembly and annotation of Yaluo

description: Genome assemble and annotation of Yaluo
DOI: 10.6084/m9.figshare.12922088.v2
title: Additional file 1 of Investigation of bovine abortion and stillbirth/perinatal mortality - similar diagnostic challenges, different approaches

description: Additional file 1. Peristillbirth questionnaire.
DOI: 10.6084/m9.figshare.12922088.v1
title: Additional file 1 of Investigation of bovine abortion and stillbirth/perinatal mortality - similar diagnostic challenges, different approaches

description: Additional file 1. Peristillbirth questionnaire.
DOI: 10.6084/m9.figshare.12922088
title: Additional file 1 of Investigation of bovine abortion and stillbirth/perinatal mortality - similar diagnostic challenges, different approaches

description: Additional file 1. Peristillbirth questionnaire.
DOI: 10.6084/m9.figshare.12922091
title: Additional file 2 of Investigation of bovine abortion and stillbirth/perinatal mortality - similar diagnostic challenges, different approaches

description: Additional file 2. Abortion questionnaire.
DOI: 10.6084/m9.figshare.12922091.v2
title: Additional file 2 of Investigation of bovine abortion and stillbirth/perinatal mortality - similar diagnostic challenges, different approaches

description: Additional file 2. Abortion questionnaire.
DOI: 10.6084/m9.figshare.14479937.v1
title: Additional file 2 of Assessment of the endocrine disrupting properties of bisphenol AF: a case study applying the European regulatory criteria and guidance

description: Additional file 2. 88 studies.
DOI: 10.6084/m9.figshare.12922091.v1
title: Additional file 2 of Investigation of bovine abortion and stillbirth/perinatal mortality - similar diagnostic challenges, different approaches

description: Additional file 2. Abortion questionnaire.
DOI: 10.6084/m9.figshare.14479940.v1
title: Additional file 3 of Assessment of the endocrine disrupting properties of bisphenol AF: a case study applying the European regulatory criteria and guidance

description: Additional file 3. Lines of Evidence.
DOI: 10.6084/m9.figshare.14479940
title: Additional file 3 of Assessment of the endocrine disrupting properties of bisphenol AF: a case study applying the European regulatory criteria and guidance

description: Additional file 3. Lines of Evidence.
DOI: 10.6084/m9.figshare.14479972
title: Additional file 2 of Comparing malaria early detection methods in a declining transmission setting in northwestern Ethiopia

description: Additional file 2. Variations of event detection algorithms tested. The file contains two tables for Plasmodium falciparum and mixed species of all the different parameter combinations tested. The first sheet is for the random, weekly statistical, and CDC EARS methods, the second sheet for the Farrington algorithms, and the third sheet for a description of the fields.
DOI: 10.6084/m9.figshare.14479972.v1
title: Additional file 2 of Comparing malaria early detection methods in a declining transmission setting in northwestern Ethiopia

description: Additional file 2. Variations of event detection algorithms tested. The file contains two tables for Plasmodium falciparum and mixed species of all the different parameter combinations tested. The first sheet is for the random, weekly statistical, and CDC EARS methods, the second sheet for the Farrington algorithms, and the third sheet for a description of the fields.
DOI: 10.6084/m9.figshare.14480009
title: Additional file 1 of Integrated transcriptome and proteome analysis reveals complex regulatory mechanism of cotton in response to salt stress

description: Additional file 1: Figure S1. Description of Xinluzhong 54. a Cultivation area of Xinluzhong 54. b-c Plant phenotype of Xinluzhong 54 under 150 mmol·L− 1 and 250 mmol·L− 1 NaCl treatment, respectively. Figure S2. Identification of differentially expressed genes (DEGs) in response to salt stress. a The number of DEGs on each chromosome. b qRT-PCR validation of transcript levels evaluated by RNA-Seq. Figure S3. Functional enrichment analysis of DEGs. a Expression patterns and enrichment pathways of 1 136 common DEGs. b KEGG analysis of up-regulated DEGs. c KEGG analysis of down-regulated DEGs. Figure S4. Functional enrichment analysis of DEGs. a KEGG analysis of up-regulated DEPs. b KEGG analysis of down-regulated DEPs. Figure S5. Expression patterns of differentially expressed proteins involved in photosynthesis and carbon catabolism. a-c stand for the expression patterns of DEPs involved in photosynthesis, glycolysis/ gluconeogenesis and TCA cycle, respectively. Figure S6. Plant hormone signal pathways analysis. The expression changes of key node genes involved in different hormone signal pathway under salt stress treatment. Figure S7. Transcription factors response to salt stress in cotton. a and b stand for the statistics of up-regulated and down-regulated transcription factors induced by salt stress, respectively. c The expression patterns of different transcription factors under salt stress treatment. Figure S8. Potential protein interaction models through the STRING database. a Predicted CBL-CIPK protein interaction patterns. b Predicted MAPK signal cascade protein interaction patterns. Table S1. Primers used for qRT-PCR. Table S2. Transcriptome data statistics. Table S3. Statistics on the correlation between DEGs and DEPs. Table S4. Information of associated genes.
DOI: 10.6084/m9.figshare.14480009.v1
title: Additional file 1 of Integrated transcriptome and proteome analysis reveals complex regulatory mechanism of cotton in response to salt stress

description: Additional file 1: Figure S1. Description of Xinluzhong 54. a Cultivation area of Xinluzhong 54. b-c Plant phenotype of Xinluzhong 54 under 150 mmol·L− 1 and 250 mmol·L− 1 NaCl treatment, respectively. Figure S2. Identification of differentially expressed genes (DEGs) in response to salt stress. a The number of DEGs on each chromosome. b qRT-PCR validation of transcript levels evaluated by RNA-Seq. Figure S3. Functional enrichment analysis of DEGs. a Expression patterns and enrichment pathways of 1 136 common DEGs. b KEGG analysis of up-regulated DEGs. c KEGG analysis of down-regulated DEGs. Figure S4. Functional enrichment analysis of DEGs. a KEGG analysis of up-regulated DEPs. b KEGG analysis of down-regulated DEPs. Figure S5. Expression patterns of differentially expressed proteins involved in photosynthesis and carbon catabolism. a-c stand for the expression patterns of DEPs involved in photosynthesis, glycolysis/ gluconeogenesis and TCA cycle, respectively. Figure S6. Plant hormone signal pathways analysis. The expression changes of key node genes involved in different hormone signal pathway under salt stress treatment. Figure S7. Transcription factors response to salt stress in cotton. a and b stand for the statistics of up-regulated and down-regulated transcription factors induced by salt stress, respectively. c The expression patterns of different transcription factors under salt stress treatment. Figure S8. Potential protein interaction models through the STRING database. a Predicted CBL-CIPK protein interaction patterns. b Predicted MAPK signal cascade protein interaction patterns. Table S1. Primers used for qRT-PCR. Table S2. Transcriptome data statistics. Table S3. Statistics on the correlation between DEGs and DEPs. Table S4. Information of associated genes.
DOI: 10.6084/m9.figshare.14480020
title: Additional file 1 of Extracting knowledge networks from plant scientific literature: potato tuber flesh color as an exemplary trait

description: Additional file 1 Confusion matrix. A text file (.csv) containing a confusion matrix table displaying the entity detection per article for the full training set of 34 articles.
DOI: 10.6084/m9.figshare.14480020.v1
title: Additional file 1 of Extracting knowledge networks from plant scientific literature: potato tuber flesh color as an exemplary trait

description: Additional file 1 Confusion matrix. A text file (.csv) containing a confusion matrix table displaying the entity detection per article for the full training set of 34 articles.
DOI: 10.6084/m9.figshare.14480029
title: Additional file 4 of Extracting knowledge networks from plant scientific literature: potato tuber flesh color as an exemplary trait

description: Additional file 4 List of training set documents. A text file (.csv) containing the list of 34 articles used in the training set.