cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23714007
title: 20220225_orer_scb488

description: OreR embryos stained for scb mRNA
DOI: 10.6084/m9.figshare.23714007.v1
title: 20220225_orer_scb488

description: OreR embryos stained for scb mRNA
DOI: 10.6084/m9.figshare.23709741
title: Analysis Data.xlsx

description: Efficient body movement is required in our daily lives, as it facilitates responding to the external environment and producing movements in various directions and distances. While numerous studies have reported on goal-directed movements in the frontal direction during gait initiation, there is limited research on the efficient movement of the lower limbs in multiple directions and distances. Therefore, we aimed to examine changes in the kinematics of lower-limb reaching movements to determine skilled motor ability in terms of direction and distance. Sixteen adults (10 male participants) were requested to reach targets projected on the floor in seven directions and at three distances for a total of 21 points. The reaching time slowed down for the contralateral side (right foot to left-sided target) and was caused by a slower start of the toe movement. To identify the cause of this delay, we analyzed the onset of movement at each joint and found that movement to the contralateral side starts from the hip, followed by the knee, and subsequently the toe. The time-to-peak velocity was also calculated, and the motion required to reach the target in the shortest time varied depending on direction and distance. These results suggested that movement kinematics vary with direction and distance, resulting in a slower reaching time on the contralateral side. The results of our study hold promise for potential applications in sports and rehabilitation.
DOI: 10.6073/pasta/938aa501253ef963162233dfb1b1928c
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 8 meteorological station: 5-minute summary wind and air temperature data: 2013 - ongoing

description: This data package contains 5-minute air temperature and wind summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-8 met station. Average air temperature, wind speed, and wind direction are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. This is a subset of baseline weather data collected at the 15 Jornada Basin LTER CSIS study blocks, New Mexico. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.6073/pasta/1fe6faa8c3cb16af0587eca306a66fa8
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 8 meteorological station: 1-hour summary data: 2017 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-8 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.5281/zenodo.8166287
title: PNAS_data

description: These two publicly shared data are used for article publishing on PNAS.
DOI: 10.5281/zenodo.8166286
title: PNAS_data

description: These two publicly shared data are used for article publishing on PNAS.
DOI: 10.6084/m9.figshare.23714004
title: Autophagy promotes jasmonate-mediated defense against nematodes.xlsx

description: Autophagy, as an intracellular degradation system, plays a critical role in plant immunity. However, the involvement of autophagy in the plant immune system and its function in plant nematode resistance are largely unknown. Here, we show that root-knot nematode (RKN; <em>Meloidogyne incognita</em>) infection induced autophagy in tomato (<em>Solanum lycopersicum</em>) and different <em>atg </em>mutants exhibited high sensitivity to RKNs. The jasmonate (JA) signaling negative regulators jasmonate-associated MYC2-like 1 (JAM1), JAM2 and JAM3 interacted with ATG8s via an ATG8-interacting motif (AIM), and JAM1 was degraded by autophagy during RKN infection. JAM1 impaired the formation of a transcriptional activation complex between ethylene response factor 1 (ERF1) and mediator 25 (MED25), and interfered with transcriptional regulation of JA mediated defense-related genes by ERF1. Furthermore, ERF1 acted in positive and regulated autophagy activity via transcriptionally activating <em>ATG</em> expression in response to RKN infection. Therefore, autophagy promotes JA mediated defense against RKNs via forming a positive feedback circuit in the degradation of JAMs and transcriptional activation by ERF1.
DOI: 10.6084/m9.figshare.23714004.v1
title: Autophagy promotes jasmonate-mediated defense against nematodes.xlsx

description: Autophagy, as an intracellular degradation system, plays a critical role in plant immunity. However, the involvement of autophagy in the plant immune system and its function in plant nematode resistance are largely unknown. Here, we show that root-knot nematode (RKN; <em>Meloidogyne incognita</em>) infection induced autophagy in tomato (<em>Solanum lycopersicum</em>) and different <em>atg </em>mutants exhibited high sensitivity to RKNs. The jasmonate (JA) signaling negative regulators jasmonate-associated MYC2-like 1 (JAM1), JAM2 and JAM3 interacted with ATG8s via an ATG8-interacting motif (AIM), and JAM1 was degraded by autophagy during RKN infection. JAM1 impaired the formation of a transcriptional activation complex between ethylene response factor 1 (ERF1) and mediator 25 (MED25), and interfered with transcriptional regulation of JA mediated defense-related genes by ERF1. Furthermore, ERF1 acted in positive and regulated autophagy activity via transcriptionally activating <em>ATG</em> expression in response to RKN infection. Therefore, autophagy promotes JA mediated defense against RKNs via forming a positive feedback circuit in the degradation of JAMs and transcriptional activation by ERF1.
DOI: 10.5281/zenodo.8166308
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by G Dallas Hanna, http://www.wikidata.org/entity/Q3093467. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3093467
DOI: 10.5281/zenodo.8166307
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by G Dallas Hanna, http://www.wikidata.org/entity/Q3093467. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3093467
DOI: 10.6084/m9.figshare.23714037
title: Inter-genomic syntenic blocks

description: Inter-genomic syntenic blocks
DOI: 10.6073/pasta/e6c6ad8289d5da3019c6a8b5d3a9a42d
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 8 meteorological station: Daily average soil volumetric water content data: 2013 - ongoing

description: Daily Average of 30-minute Soil Volumetric Water Content data at 10 cm at CSIS Block-8. Collection of soil water content data at Jornada LTER Cross-scale Interactions Study (CSIS) blocks, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Soil volumetric water content is measured every 30 minutes at 10 cm depth at 3 locations at each of the 4 plots per block and averaged for the daily value. The locations in each plot are under bare soil, under perennial grass, and under shrub. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are recorded at an automated meteorological station installed at Jornada LTER CSIS Block-8 site. This is an ONGOING dataset.
DOI: 10.3886/e183306v2-140317
title: Career Plans and Experiences of June 1961, College Graduates: Stata Data

description: These files are designed to increase the accessibility of the "Career Plans and Experiences of June 1961, College Graduates" data. The raw data can be downloaded from ICPSR dataset 7344. These files provide dictionary files and STATA.do files to turn the original ASCII files into .dta files that can be analyzed using Stata. Included in this folder are the original ASCII files, the dictionary files, the Stata .do files to apply these labels, and the resulting Stata .dta files.<br>For further details on these data and an illustration of their application, see: Goldin, (2021). "Career and Family: Women's Century-Long Journey Towards Equity", Princeton University Press.<br>
DOI: 10.6073/pasta/bf8b5899b2e6bace4ceefa48fd3c970b
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 8 meteorological station: Daily summary data: 2013 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-8 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.5281/zenodo.8166324
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Isabelle Caroline Darrow Stewart, http://www.wikidata.org/entity/Q106821058. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q106821058
DOI: 10.5281/zenodo.8166323
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Isabelle Caroline Darrow Stewart, http://www.wikidata.org/entity/Q106821058. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q106821058
DOI: 10.6084/m9.figshare.23714080
title: Additional file 1 of RFID trial: localization of non-palpable breast lesions using radiofrequency identification tags or wire

description: Additional file 1.
DOI: 10.6084/m9.figshare.23714080.v1
title: Additional file 1 of RFID trial: localization of non-palpable breast lesions using radiofrequency identification tags or wire

description: Additional file 1.
DOI: 10.6084/m9.figshare.23714122
title: Additional file 3 of Prognostic factors for persistent symptoms in adults with mild traumatic brain injury: an overview of systematic reviews

description: Additional file 3.
DOI: 10.6084/m9.figshare.23714122.v1
title: Additional file 3 of Prognostic factors for persistent symptoms in adults with mild traumatic brain injury: an overview of systematic reviews

description: Additional file 3.
DOI: 10.6084/m9.figshare.23714166
title: Additional file 3 of Probiotic supplementation during antibiotic treatment is unjustified in maintaining the gut microbiome diversity: a systematic review and meta-analysis

description: Additional file 3: Fig. S1. Additional sensitivity analysis for the baseline values of Shannon diversity index; Fig. S2. Additional sensitivity analysis for the change between the “before-after” values of Shannon diversity index; Fig. S3. Additional sensitivity analysis for the baseline values of Chao1 index; Fig. S4. Additional sensitivity analysis for the change between the “before-after” values of Chao1 index; Fig. S5. Additional sensitivity analysis for the baseline values of Observed OTUs; Fig. S6. Additional sensitivity analysis for the change between the “before-after” values of Observed OTUs; Fig. S7. Risk of bias assessment for the main meta-analysis of Shannon diversity index - Assignment to intervention; Fig. S8. Risk of bias assessment for the main meta-analysis of Shannon diversity index - Adhering to intervention ; Fig. S9. Risk of bias assessment for the meta-analysis of Chao1 index - Assignment to intervention; Fig. S10. Risk of bias assessment for the meta-analysis of Chao1 index - Adhering to interventionFig. S11. Risk of bias assessment for the meta-analysis of Observed OTUs - Assignment to intervention; Fig. S12. Risk of bias assessment for the meta-analysis of Observed OTUs - Adhering to intervention.
DOI: 10.6084/m9.figshare.23714166.v1
title: Additional file 3 of Probiotic supplementation during antibiotic treatment is unjustified in maintaining the gut microbiome diversity: a systematic review and meta-analysis

description: Additional file 3: Fig. S1. Additional sensitivity analysis for the baseline values of Shannon diversity index; Fig. S2. Additional sensitivity analysis for the change between the “before-after” values of Shannon diversity index; Fig. S3. Additional sensitivity analysis for the baseline values of Chao1 index; Fig. S4. Additional sensitivity analysis for the change between the “before-after” values of Chao1 index; Fig. S5. Additional sensitivity analysis for the baseline values of Observed OTUs; Fig. S6. Additional sensitivity analysis for the change between the “before-after” values of Observed OTUs; Fig. S7. Risk of bias assessment for the main meta-analysis of Shannon diversity index - Assignment to intervention; Fig. S8. Risk of bias assessment for the main meta-analysis of Shannon diversity index - Adhering to intervention ; Fig. S9. Risk of bias assessment for the meta-analysis of Chao1 index - Assignment to intervention; Fig. S10. Risk of bias assessment for the meta-analysis of Chao1 index - Adhering to interventionFig. S11. Risk of bias assessment for the meta-analysis of Observed OTUs - Assignment to intervention; Fig. S12. Risk of bias assessment for the meta-analysis of Observed OTUs - Adhering to intervention.
DOI: 10.5281/zenodo.8166330
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Ferdinand Deppe, http://www.wikidata.org/entity/Q66077. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q66077
DOI: 10.5281/zenodo.8166332
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Léon Delvosalle, http://www.wikidata.org/entity/Q3270896. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3270896
DOI: 10.5281/zenodo.8166331
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Léon Delvosalle, http://www.wikidata.org/entity/Q3270896. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3270896
DOI: 10.5281/zenodo.8166336
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Alfred Aloys Dewèvre, http://www.wikidata.org/entity/Q18984207. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q18984207
DOI: 10.6084/m9.figshare.23714191
title: Additional file 5 of Healthcare use attributable to COVID-19: a propensity-matched national electronic health records cohort study of 249,390 people in Wales, UK

description: Additional file 5: Table S4. Underlying plot data for figures 2 – 9. HR – Hazard Ratio, CI – Confidence Interval.
DOI: 10.6084/m9.figshare.23714191.v1
title: Additional file 5 of Healthcare use attributable to COVID-19: a propensity-matched national electronic health records cohort study of 249,390 people in Wales, UK

description: Additional file 5: Table S4. Underlying plot data for figures 2 – 9. HR – Hazard Ratio, CI – Confidence Interval.
DOI: 10.5281/zenodo.8166335
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Alfred Aloys Dewèvre, http://www.wikidata.org/entity/Q18984207. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q18984207
DOI: 10.5281/zenodo.8166338
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Max Julius Dinklage, http://www.wikidata.org/entity/Q21510433. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q21510433
DOI: 10.5281/zenodo.8166337
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Max Julius Dinklage, http://www.wikidata.org/entity/Q21510433. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q21510433
DOI: 10.7925/drs1.duchas_5070751
title: Aughaconey

description: A collection of folklore and local history stories from Aughaconey (school) (Aghaconny, Co. Cavan), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher S. Mac Síomóin.
description: Local Marriage Customs -- Churning -- Butter-Making - Stories / Reilly, Bernard O' -- Butter-Making - a Story / Galligan, Mollie -- Butter-Making - a Story / Brady, Vincent -- Butter-Making - a Story / Galligan, Anna -- Butter-Making - a Story / Martin, Kathleen -- Butter-Making - a Story / Martin, Kathleen -- Riddles -- Keep the bad dog on your side -- Local Games -- Local Cures -- Weather-Lore -- Local Place Names / Galligan, Mollie -- Our Farm / Reilly, Maggie O -- Our Farm / Reilly, Rose O -- Our Farm / Martin, Kathleen -- Our Farm / Brady, Vincent -- Our Farm / Philips, Kathleen Mc -- Names of Fields on other Farms / Galligan, Andrew -- Our Farm / Heaslip, Thomas -- Our Farm / Lynch, Bernard -- Local Forges -- Severe Weather / Reilly, Maggie O -- Another Storm / Reilly, Susan O -- Another Storm / Galligan, Anna -- Big Wind Storm -- My Home District -- My Home District -- My Home District -- Farm Animals -- Herbs -- Fairy Forts -- Story -- Fairy Forts / Smyth, Peter -- Another Story / Brady, Vincent -- Fairy Forts -- Another Story / Reilly, Susan O -- Local Prayers / Martin, Kathleen / Galligan, Mollie / Brady, Brigid / Reilly, Susan / Lynch, Bernard -- Famine Times / Reilly, Maggie O -- Landlord / Galligan, Mollie -- Making a Doll / Galligan, Mollie -- Making a Daisy Chain / Galligan, Mollie -- Making a Top / Smith, Peter -- Baton / Reilly, Brian O -- Old Crafts / Galligan, Mollie -- Making a Losad / Reilly, Susan -- Making Donkey Mats / Smith, Peter -- Making Creels or Bardogs / Reilly, Brian O -- Thatching / Reilly, Brian O -- Song - Cavan Meeting / Martin, Kathleen -- Pat O'Donnell / Nally, Thomas Mc -- Irish Words Still in Use -- Care of the Feet / Reilly, Maggie O -- Food in the Olden Days / Reilly, Sue O -- Irish Words Still in Use in District -- Bread / Reilly, Sue O -- Old Schools / Galligan, Mollie -- Old Houses / Galligan, Mollie -- Local Fairs / Reilly, Sue -- Old Sayings -- Travelling Tailor / Smith, Peadar -- St Stephen's Day / Galligan, Mollie -- Football Match / Reilly, Sue O -- Another Football Match / Galligan, Molly
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5070780
title: Barconey Robinson

description: A collection of folklore and local history stories from Barconey Robinson (school) (Barconny (Robinson), Co. Cavan), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher M. Mac Eochagáin.
description: Local Ruins / Bray, Bridie -- Bird-Lore / Bray, Bridie -- Hurling and Football / Brady, Jane -- Clothes Made Locally / Brady, Jane -- Landlords / Coyle, Maeve -- Story / Rogers, M. -- Old Graveyards / Rogers, Maggie -- Roads / Brady, Jane -- Leprechaun / Brady, Jane -- Story -- Spraying
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.