cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5853054
title: Binocular Unmasking data

description: This file contains the minimal dataset for the manuscript titled "The Unmasking Effect of Different Binocular Disparity in Letter Recognition under Increasing-information induced Background".<br>The design of the experiment is fully explained in the manuscript.
DOI: 10.6084/m9.figshare.5853054.v1
title: Binocular Unmasking data.xlsx

description: This file contains the minimal dataset for the manuscript titled "The Unmasking Effect of Different Binocular Disparity in Letter Recognition under Increasing-information induced Background".<br>The design of the experiment is fully explained in the manuscript.
DOI: 10.6084/m9.figshare.5852967
title: Dataset - Patient-tailored triage decisions by anaesthesiologist-staffed pre-hospital critical care teams - A retrospective descriptive study.xls

description: Data extracted from the pre-hospital critical care services database of the Central Denmark Region during 2013-2014. All data are anonymous and without personal identifiers. Describing pre-hospital critical care team (PHCCT) patient contacts in absolute numbers, including number of patients seen by each specific PHCCT, pre-hospital tentative diagnosis and destination hospital.<br>
DOI: 10.6084/m9.figshare.5852961
title: Data and code from Local extinctions of insular avifauna on the most remote inhabited island in the world

description: R script for Bayesian extinction date estimation following Solow & Beet 2014, and accompanying data files for Tristan Albatross, Tristan Finch, and Tristan Moorhen.
DOI: 10.6084/m9.figshare.5852967.v1
title: Dataset - Patient-tailored triage decisions by anaesthesiologist-staffed pre-hospital critical care teams - A retrospective descriptive study.xls

description: Data extracted from the pre-hospital critical care services database of the Central Denmark Region during 2013-2014. All data are anonymous and without personal identifiers. Describing pre-hospital critical care team (PHCCT) patient contacts in absolute numbers, including number of patients seen by each specific PHCCT, pre-hospital tentative diagnosis and destination hospital.<br>
DOI: 10.6084/m9.figshare.12497399
title: Supplementary to scientific article "The serotonin reuptake transporter is reduced in the epithelium of active Crohn’s disease and ulcerative colitis"

description: Supplementary to scientific article "The serotonin reuptake transporter is reduced in the epithelium of active Crohn’s disease and ulcerative colitis"
DOI: 10.6084/m9.figshare.12497399.v2
title: Supplementary to scientific article "The serotonin reuptake transporter is reduced in the epithelium of active Crohn’s disease and ulcerative colitis"

description: Supplementary to scientific article "The serotonin reuptake transporter is reduced in the epithelium of active Crohn’s disease and ulcerative colitis"
DOI: 10.6084/m9.figshare.12497399.v1
title: Supplementary to scientific article "The serotonin reuptake transporter is reduced in the epithelium of active Crohn’s disease and ulcerative colitis"

description: Supplementary to scientific article "The serotonin reuptake transporter is reduced in the epithelium of active Crohn’s disease and ulcerative colitis" submitted to American Journal of Physiology - Gastrointestinal and Liver Physiology the 17th of june 2020. S1-S5 are patient characteristics. S6 is raw data from gene expression microarray, RT-qPCR, IHC and RNA-Seq. S7 is the protocol from the colonoid experiment.
DOI: 10.6084/m9.figshare.5852925.v1
title: High School Journalists Write about Nutrition and Physical Activity

description: Many content analyses ofmass media and health messages havebeen conducted, but little is knownregarding the perceptions of high schoolstudents about health-related topics.The authors conducted a content analysisof 218 newspapers collected from25 Arizona high schools published duringthe 2003-2004 academic year.Two independent evaluators read eachentire newspaper, identified qualifyingarticles (n = 95), and categorized contentby the 2005 Dietary Guidelines forAmericans. Evaluators sorted each article’scontent into one or more groupsreflecting the MyPyramid food categoriesand tracked article themes relatedto harms or benefits of lifestyle choices.Articles were also scored regardinginformation accuracy. Categorizing bythe 2005 Dietary Guidelines, the mostfrequently mentioned article topicswere “carbohydrates” or “reduced sugars”in foods (55%), “weight management”(53%), and “physical activity”(45%). In all, 15% of articles includedsome incorrect information in their text.These data show that healthy eating andactive lifestyles are important concernsfor high school journalism students.Journalism and dietetics professionalsshould volunteer with high school journalismclasses to encourage these interestsand to promote greater coverage of nutrition and health issues as well asmore accurate reporting.
DOI: 10.6084/m9.figshare.5852895
title: MOESM5 of Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii

description: Additional file 5. R/qtl phenotype input file. File containing the NIRS phenotypes for the mapping population.
DOI: 10.6084/m9.figshare.5852895.v1
title: MOESM5 of Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii

description: Additional file 5. R/qtl phenotype input file. File containing the NIRS phenotypes for the mapping population.
DOI: 10.6084/m9.figshare.5852889
title: MOESM4 of Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii

description: Additional file 4. R/qtl genotype input file. File containing the P. hallii genetic linkage map and genotypes for the mapping population.
DOI: 10.6084/m9.figshare.5852889.v1
title: MOESM4 of Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii

description: Additional file 4. R/qtl genotype input file. File containing the P. hallii genetic linkage map and genotypes for the mapping population.
DOI: 10.6084/m9.figshare.5852853
title: Chr6_AsiIS_90404906.pdf

description: DNA sequences from which data was extracted to obtain Figure 5E and Supplementary Table 3.
DOI: 10.6084/m9.figshare.5852853.v1
title: Chr6_AsiIS_90404906.pdf

description: DNA sequences from which data was extracted to obtain Figure 5E and Supplementary Table 3.
DOI: 10.6084/m9.figshare.5852844
title: Phylogenetic relationships of the family Tarumaniidae (Characiformes) based on nuclear and mitochondrial data

description: Appendix 1. List of characiform species included in this study
DOI: 10.6084/m9.figshare.5852844.v1
title: Phylogenetic relationships of the family Tarumaniidae (Characiformes) based on nuclear and mitochondrial data

description: Appendix 1. List of characiform species included in this study
DOI: 10.6084/m9.figshare.5852577
title: HAL Workshop 2 Day 2

description: Audio From:Understanding Distributed Agency Between Listening Algorithms and HumansMay 31-June 1 2017. Sonic Arts Research Centre, Queen’s University Belfast<em>What can improvisation and computer music performance practices teach us about human-machine agency?</em><em>How might this inform or challenge our understanding of how we can actively listen together with machines?</em>
DOI: 10.6084/m9.figshare.5852577.v1
title: HAL Workshop 2 Day 2

description: Audio From:Understanding Distributed Agency Between Listening Algorithms and HumansMay 31-June 1 2017. Sonic Arts Research Centre, Queen’s University Belfast<em>What can improvisation and computer music performance practices teach us about human-machine agency?</em><em>How might this inform or challenge our understanding of how we can actively listen together with machines?</em>
DOI: 10.6084/m9.figshare.5852511
title: Depressiveness and neuroticism in Bartonella seropositive and seronegative subjects – preregistered case-controls study (data)

description: Several recent studies have demonstrated the association of cat-related injuries with major depression and with depressiveness in the general population. It was suggested that cat-scratch disease, the infection with the bacterium <i>Bartonella</i> <i>henselae</i>, can be responsible for the observed association. However, no direct evidence for the role of the <i>Bartonella</i> infection in this association has been published until now. In this preregistered case-controls study performed on 250 healthy subjects tested earlier for the presence of anti-<i>Toxoplasma</i> IgG antibodies, we searched for the positive association between presence of anamnestic anti-<i>Bartonella</i> IgG antibodies and depressiveness measured with Beck II inventory, depression subscale of neuroticism measured with N-70 questionnaire, and self-reported health problems. We found that that <i>Bartonella</i>-seropositivity was positively correlated with Beck depression only in <i>Toxoplasma</i>-seronegative men and negatively correlated with health in <i>Toxoplasma</i>-seronegative women. <i>Bartonella</i> seropositivity expressed protective effects against <i>Toxoplasma</i> seropositivity-associated increased neuroticism in men while <i>Toxoplasma</i>-seropositivity expressed protective effects against <i>Bartonella</i> seropositivity-associated health problems in women. A comparison of the patterns of association of mental and physical health problems with <i>Bartonella</i> seropositivity and with reported cat-related injury suggests that different factor, possibly infection with different pathogen transmitted by cat related-injuries than the <i>Bartonella</i> <i>henselae</i>, is responsible for the observed association of cat related-injuries with depressiveness and major depression. The existence of complex interactions between <i>Bartonella</i> seropositivity, <i>Toxoplasma</i> seropositivity, and sex also suggest that the effect of symbionts on the host’s phenotype must by always studied in the context of other infections, and separately for men and women.
DOI: 10.6084/m9.figshare.5852451
title: Dataset for: Gradient-based optimization with B-splines on sparse grids for solving forward-dynamics simulations of three-dimensional, continuum-mechanical musculoskeletal system models

description: Investigating the interplay between muscular activity and motion is the basis to improve our understanding of healthy or diseased musculoskeletal systems. To be able to analyze the musculoskeletal systems, computational models are employed. Albeit some severe modeling assumptions, almost all existing musculoskeletal system simulations appeal to multi-body simulation frameworks. Although continuum-mechanical musculoskeletal system models can compensate for some of these limitations, they are essentially not considered due to their computational complexity and cost. The proposed framework is the first activation-driven musculoskeletal system model, in which the exerted skeletal muscle forces are computed using three-dimensional, continuum-mechanical skeletal muscle models and in which muscle activations are determined based on a constraint optimization problem. Numerical feasibility is achieved by computing sparse grid surrogates with hierarchical B-splines, and adaptive sparse grid refinement further reduces the computational effort. The choice of B-splines allows the use of all existing gradient-based optimization techniques without further numerical approximation. This paper demonstrates that the resulting surrogates have low relative errors (less than 0.76%) and can be used within forward simulations that are subject to constraint optimization. To demonstrate this, we set up several different test scenarios in which an upper limb model consisting of the elbow joint, the biceps and triceps brachii and an external load is subjected to different optimization criteria. Even though this novel method has only been demonstrated for a two-muscle system, it can easily be extended to musculoskeletal systems with three or more muscles.
DOI: 10.6084/m9.figshare.5852451.v1
title: Dataset for: Gradient-based optimization with B-splines on sparse grids for solving forward-dynamics simulations of three-dimensional, continuum-mechanical musculoskeletal system models

description: Investigating the interplay between muscular activity and motion is the basis to improve our understanding of healthy or diseased musculoskeletal systems. To be able to analyze the musculoskeletal systems, computational models are employed. Albeit some severe modeling assumptions, almost all existing musculoskeletal system simulations appeal to multi-body simulation frameworks. Although continuum-mechanical musculoskeletal system models can compensate for some of these limitations, they are essentially not considered due to their computational complexity and cost. The proposed framework is the first activation-driven musculoskeletal system model, in which the exerted skeletal muscle forces are computed using three-dimensional, continuum-mechanical skeletal muscle models and in which muscle activations are determined based on a constraint optimization problem. Numerical feasibility is achieved by computing sparse grid surrogates with hierarchical B-splines, and adaptive sparse grid refinement further reduces the computational effort. The choice of B-splines allows the use of all existing gradient-based optimization techniques without further numerical approximation. This paper demonstrates that the resulting surrogates have low relative errors (less than 0.76%) and can be used within forward simulations that are subject to constraint optimization. To demonstrate this, we set up several different test scenarios in which an upper limb model consisting of the elbow joint, the biceps and triceps brachii and an external load is subjected to different optimization criteria. Even though this novel method has only been demonstrated for a two-muscle system, it can easily be extended to musculoskeletal systems with three or more muscles.
DOI: 10.6084/m9.figshare.5852436
title: Additional file 9: Table S4. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Community composition, seasonal, and time-decay analyses. (XLSX 35Â kb)
DOI: 10.6084/m9.figshare.5852436.v1
title: Additional file 9: Table S4. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Community composition, seasonal, and time-decay analyses. (XLSX 35Â kb)
DOI: 10.6084/m9.figshare.5852430
title: Additional file 7: Table S3. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Shannon diversity across sites, seasons, and individuals, and diversity comparison between sample groups. Shannon diversity calculated based on â breakawayâ package in R [56]. (XLSX 51Â kb)
DOI: 10.6084/m9.figshare.5852430.v1
title: Additional file 7: Table S3. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Shannon diversity across sites, seasons, and individuals, and diversity comparison between sample groups. Shannon diversity calculated based on â breakawayâ package in R [56]. (XLSX 51Â kb)
DOI: 10.6084/m9.figshare.5852424
title: Additional file 5: Table S2. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Deseq2 and negative binomial mixed model analyses of OTUs showing differential abundance between season pairs. (XLSX 203Â kb)
DOI: 10.6084/m9.figshare.5852424.v1
title: Additional file 5: Table S2. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Deseq2 and negative binomial mixed model analyses of OTUs showing differential abundance between season pairs. (XLSX 203Â kb)
DOI: 10.6084/m9.figshare.5852415
title: Additional file 2: Table S1. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Relative abundance and coefficients of variations of top genera. Top genera with average relative abundance of â Ľ1% across the dataset are represented. For each genus, individual, and skin site, the CV is represented by the standard deviation of the relative abundance of that genus divided by its mean relative abundance over the four seasons. (XLSX 322Â kb)
DOI: 10.6084/m9.figshare.5852415.v1
title: Additional file 2: Table S1. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Relative abundance and coefficients of variations of top genera. Top genera with average relative abundance of â Ľ1% across the dataset are represented. For each genus, individual, and skin site, the CV is represented by the standard deviation of the relative abundance of that genus divided by its mean relative abundance over the four seasons. (XLSX 322Â kb)
DOI: 10.6084/m9.figshare.5852406
title: Additional file 18: Table S7. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Sample metadata. (XLSX 73Â kb)
DOI: 10.6084/m9.figshare.5852406.v1
title: Additional file 18: Table S7. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Sample metadata. (XLSX 73Â kb)
DOI: 10.6084/m9.figshare.5852397
title: Additional file 16: Table S6. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Pairwise weighted UniFrac distances between samples from the same individual, cohabitants, and non-cohabitants. (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.5852397.v1
title: Additional file 16: Table S6. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Pairwise weighted UniFrac distances between samples from the same individual, cohabitants, and non-cohabitants. (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.5852394
title: Additional file 1: of Cilostazol induced migraine does not respond to sumatriptan in a double blind trial

description: Datasheet Cilostazol MO. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.5852394.v1
title: Additional file 1: of Cilostazol induced migraine does not respond to sumatriptan in a double blind trial

description: Datasheet Cilostazol MO. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.5852379
title: Additional file 13: Table S5. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Significant SPIEC-EASI correlations between pairs of OTUs and taxonomic information of hub OTUs. Absolute correlations of â Ľ0.05 are included in the table. (XLSX 232Â kb)
DOI: 10.6084/m9.figshare.5852379.v1
title: Additional file 13: Table S5. of Individual and household attributes influence the dynamics of the personal skin microbiota and its association network

description: Significant SPIEC-EASI correlations between pairs of OTUs and taxonomic information of hub OTUs. Absolute correlations of â Ľ0.05 are included in the table. (XLSX 232Â kb)
DOI: 10.6084/m9.figshare.5852313
title: MOESM4 of A scalable method to quantify the relationship between urban form and socio-economic indexes

description: Additional file 4. This compressed folder contains the tables with metrics of urban form and IMD, for the six cities under study. (zip)
DOI: 10.6084/m9.figshare.5852313.v1
title: MOESM4 of A scalable method to quantify the relationship between urban form and socio-economic indexes

description: Additional file 4. This compressed folder contains the tables with metrics of urban form and IMD, for the six cities under study. (zip)
DOI: 10.6084/m9.figshare.5852301
title: MOESM3 of A set of microsatellite markers to differentiate Plasmodium falciparum progeny of four genetic crosses

description: Additional file 3. â Microsatellite fingerprints of genetic crossesâ includes four worksheets of data from the individual crosses.
DOI: 10.6084/m9.figshare.5852301.v1
title: MOESM3 of A set of microsatellite markers to differentiate Plasmodium falciparum progeny of four genetic crosses

description: Additional file 3. â Microsatellite fingerprints of genetic crossesâ includes four worksheets of data from the individual crosses.
DOI: 10.6084/m9.figshare.5852289
title: Additional file 1: of National Institute for Health Research (NIHR) Health Technology Assessment (HTA) Programme research funding and UK burden of disease

description: 2015 DALYs coded to HRCS and HTA programme spend raw data. (XLSX 101 kb)
DOI: 10.6084/m9.figshare.5852289.v1
title: Additional file 1: of National Institute for Health Research (NIHR) Health Technology Assessment (HTA) Programme research funding and UK burden of disease

description: 2015 DALYs coded to HRCS and HTA programme spend raw data. (XLSX 101 kb)
DOI: 10.6084/m9.figshare.5852283
title: MOESM2 of A set of microsatellite markers to differentiate Plasmodium falciparum progeny of four genetic crosses

description: Additional file 2. â Additional microsatellite markersâ includes parental types from microsatellite markers other than the set of 12 presented in the main text.
DOI: 10.6084/m9.figshare.5852283.v1
title: MOESM2 of A set of microsatellite markers to differentiate Plasmodium falciparum progeny of four genetic crosses

description: Additional file 2. â Additional microsatellite markersâ includes parental types from microsatellite markers other than the set of 12 presented in the main text.
DOI: 10.6084/m9.figshare.5852181
title: Additional file 1: Table S1. of Comparative transcriptomic analysis of resistant and susceptible alfalfa cultivars (Medicago sativa L.) after thrips infestation

description: All differentially expressed genes (DEGs) description between thrip resistant GN-1 and susceptible WL323 alfalfa cultivars. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.5852181.v1
title: Additional file 1: Table S1. of Comparative transcriptomic analysis of resistant and susceptible alfalfa cultivars (Medicago sativa L.) after thrips infestation

description: All differentially expressed genes (DEGs) description between thrip resistant GN-1 and susceptible WL323 alfalfa cultivars. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.5852154
title: Additional file 5: Table S3. of Nc886 is epigenetically repressed in prostate cancer and acts as a tumor suppressor through the inhibition of cell growth

description: Correlation of the expression of PrCa cell-cycle progression gene signature (CCP) and nc886 TSS200 methylation level in TCGA-PRAD tumor samples. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.5852154.v1
title: Additional file 5: Table S3. of Nc886 is epigenetically repressed in prostate cancer and acts as a tumor suppressor through the inhibition of cell growth

description: Correlation of the expression of PrCa cell-cycle progression gene signature (CCP) and nc886 TSS200 methylation level in TCGA-PRAD tumor samples. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.5852151
title: Additional file 2: Table S2. of The genetic structure of the Belgian population

description: Population details of the samples analyzed in the BelPHG-21 study, Belgium 2016. Indication of the number of samples taken from NHIS-2013 participants in each region and province, total number of inhabitants in 2013, number of samples taken per million inhabitants, number of invited participants, and sampling percentages. (XLSX 10Â kb)