cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/n5r6lk
title: Bacterial community profiles in a bioreduced uranium contaminated site after reoxidation

description: A site contaminated with uranium was bioreduced through multiple injections of ethanol to immobilize the uranium in situ. Then it was allowed to reoxidize via the invasion of low-pH , high-nitrate groundwater back into the reduced zone for about 4 years. To examine the biogeochemical response, high-throughput sequencing were applied to characterize bacterial population shifts.
DOI: 10.15468/dl.uqhmnt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ptilostemon afer",
 "Country is Estonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008310-250920141307145/datasets/export for details.
DOI: 10.15468/dv6kq6
title: SOLA sampling point Raw sequence reads

description: Raw environmental eukaryotic samples from the SOLA (Service d'Observation Laboratoire Arago) sampling point, in the North Western Mediterranean sea. These samples are part of a time series, from 2015 to 2017.
DOI: 10.48320/786de7e3-cdc3-46c4-9408-a78054159075
title: Court Accessibility in Georgia, 2020
DOI: 10.15468/xwp5sj
title: Deep sequencing of a DMSP-degrading gene (dmdA) in a coastal bacterioplankton community

description: Ten primer pairs targeting environmental clades of the dimethylsulfoniopropionate (DMSP) demethylase protein, DmdA, were designed using an iterative bioinformatic approach that took advantage of &gt;1700 dmdA sequences captured in marine metagenomic datasets. Using the bioinformatically-optimized primer pairs, dmdA genes were amplified from free-living coastal bacterioplankton samples and sequenced using 454 technology. An average of 6,400 amplicons per primer pair represented almost 800 clusters of environmental dmdA sequences, with clusters defined conservatively at &gt;90% nucleotide sequence identity (~95% protein identity). Systematic comparisons of primer performance showed that degenerate and inosine-based primers did not perform better than specific primer sets in retrieving dmdA diversity, and sometimes captured a lower diversity of sequences from the same DNA sample. The specific primer sets were used to compare dmdA diversity in free-living versus particle-associated bacteria in southeastern U.S. coastal waters. Hundreds of different dmdA clusters were found in both size fractions, with Roseobacter-like and SAR11-like sequences dominating both. The free-living fraction had a higher diversity of dmdA clusters overall, though clusters retrieved by a given primer set were largely shared (52-88%) across the two size fractions, and most sequences were affiliated with these shared clusters (~90%). Despite evidence from 16S rRNA-based taxonomic surveys that free-living bacterioplankton are a considerably less diverse subset of particle-associated bacteria at this site, this seems not to be the case for a widespread bacterial gene mediating sulfur transformations.
DOI: 10.5281/zenodo.17182965
title: Court Accessibility in Georgia, 2020

description: Within the project "Facilitating Implementation of Reforms in the Judiciary", implemented by Human Rights Education and Monitoring Center (EMC) in cooperation with the Institute for Development of Freedom of Information (IDFI) and Caucasus Research Resource Centers (CRRC), CRRC-Georgia conducted a survey that discusses issues related to different aspects of access to courts and attitudes of the population of Georgia.

Population: Adults (18 years old and over), excluding the populations living in territories affected by military conflict (South Ossetia and Abkhazia).

Sample Size: 2290 respondents.

Fieldwork Dates: February 19, 2020 to March 8, 2020.

Sample Design: Multi-stage cluster sampling with preliminary stratification.

Survey mode: Computer-assisted personal interview (CAPI).

Interview languages : Georgian

Results are weighted.

An executive summary of the survey results can be found in the documentation files
 
For further information about the project, please see: https://crrc.ge/en/project/facilitating-implementation-of-reforms-in-the-judiciary-fair/
description: Published on Discuss Data, https://discuss-data.net/dataset/786de7e3-cdc3-46c4-9408-a78054159075/
description: Method(s) of data collection: Face-To-Face Survey
DOI: 10.5281/zenodo.17182966
title: Court Accessibility in Georgia, 2020

description: Within the project "Facilitating Implementation of Reforms in the Judiciary", implemented by Human Rights Education and Monitoring Center (EMC) in cooperation with the Institute for Development of Freedom of Information (IDFI) and Caucasus Research Resource Centers (CRRC), CRRC-Georgia conducted a survey that discusses issues related to different aspects of access to courts and attitudes of the population of Georgia.

Population: Adults (18 years old and over), excluding the populations living in territories affected by military conflict (South Ossetia and Abkhazia).

Sample Size: 2290 respondents.

Fieldwork Dates: February 19, 2020 to March 8, 2020.

Sample Design: Multi-stage cluster sampling with preliminary stratification.

Survey mode: Computer-assisted personal interview (CAPI).

Interview languages : Georgian

Results are weighted.

An executive summary of the survey results can be found in the documentation files
 
For further information about the project, please see: https://crrc.ge/en/project/facilitating-implementation-of-reforms-in-the-judiciary-fair/
description: Published on Discuss Data, https://discuss-data.net/dataset/786de7e3-cdc3-46c4-9408-a78054159075/
description: Method(s) of data collection: Face-To-Face Survey
DOI: 10.5281/zenodo.15040067
title: Towards a taxonomy of Business Models for Data Intermediaries

description: Background: Data-driven business models (DDBMs) highlight the increasing importance of data as a key resource, raising concerns about power imbalances and data ethics. The EU’s Data Governance Act introduces data intermediaries to foster trust and promote fair data ecosystems.

Aim: This study explores the business models of data intermediaries, which remain largely unexamined despite their role in facilitating access, exchange, and control of personal data.

Method: Using Nickerson’s taxonomy methodology and the Al-Debei business model ontological structure, a comprehensive taxonomy of data intermediary business models is developed. Hierarchical clustering is then applied to identify distinct archetypes.

Results: A taxonomy of business models for data intermediaries is developed. Eight types of data intermediary business models emerge, including interorganizational data-sharing platforms, data subject control providers, and software providers.

Conclusion: This study provides a structured understanding of data intermediary business models, contributing to literature on data intermediaries and DDBMs.

Dataset: This dataset contains:



A summary of the 107 cases analyzed in this research, and how the researchers mapped the dimensions and characteristics from the taxonomy onto these cases.

Definitions of the dimensions and characteristics in the taxonomy.

A cross-table analysis showing how frequently the dimensions and characteristics appear in the eight identified archetypes.
DOI: 10.5281/zenodo.17182867
title: Towards a taxonomy of Business Models for Data Intermediaries

description: Background: Data-driven business models (DDBMs) highlight the increasing importance of data as a key resource, raising concerns about power imbalances and data ethics. The EU’s Data Governance Act introduces data intermediaries to foster trust and promote fair data ecosystems.

Aim: This study explores the business models of data intermediaries, which remain largely unexamined despite their role in facilitating access, exchange, and control of personal data.

Method: Using Nickerson’s taxonomy methodology and the Al-Debei business model ontological structure, a comprehensive taxonomy of data intermediary business models is developed. Hierarchical clustering is then applied to identify distinct archetypes.

Results: A taxonomy of business models for data intermediaries is developed. Eight types of data intermediary business models emerge, including interorganizational data-sharing platforms, data subject control providers, and software providers.

Conclusion: This study provides a structured understanding of data intermediary business models, contributing to literature on data intermediaries and DDBMs.

Dataset: This dataset contains:



A summary of the 107 cases analyzed in this research, and how the researchers mapped the dimensions and characteristics from the taxonomy onto these cases.

Definitions of the dimensions and characteristics in the taxonomy.

A cross-table analysis showing how frequently the dimensions and characteristics appear in the eight identified archetypes.
DOI: 10.15468/dl.tsv2yc
title: Occurrence Download

description: A dataset containing 1463 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Flemingia macrophylla",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1463 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008308-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/tsay6d
title: Shape Recognition & Confidence Levels.xlsx

description: :unav
DOI: 10.57745/gdqwsf
title: Exploration Strategies employed by Participants.xlsx

description: :unav
DOI: 10.57745/0ovkcu
title: Example of a participant's drawing of the perceived shape.pdf

description: :unav
DOI: 10.57745/f34tyr
title: EMG Activity.xlsx

description: :unav
DOI: 10.57745/oggrmp
title: Exploration strategies influence visual-auditory sensory substitution in a passive guidance setup

description: This dataset contains perceptual performance and exploration strategy data from a study investigating the influence of passive guidance strategies on shape perception using a sensory substitution device (SSD). The dataset includes: Perceptual Performance Data – Shape recognition rates and confidence levels of participants across four training sessions. Each participant’s performance is recorded per session, providing insight into perceptual improvements over time. Example Participant Drawings – A detailed example of one participant’s shape recognition performance across the four sessions, illustrating how perceptual accuracy was quantified through drawings. Exploration Strategies in Session 4 – Data on the strategies applied by each participant during the eight trials of the final session, where they explored shapes actively after passive training. Electromyography (EMG) Data – Muscle activity recordings (flexor and extensor carpi radialis) during passive guidance and active exploration conditions, highlighting differences in muscle engagement between guided and self-directed movements.
DOI: 10.15468/dl.dyrqsh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ptilostemon afer",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008309-250920141307145/datasets/export for details.
DOI: 10.15468/iwqpif
title: atmospheric depositon effect on bacterial diversity

description: Atmospheric inputs from mineral and anthropogenic sources are nowadays increasing globally due to desertification in one hand and industrialization on the other. In this context, it is important to understand how atmospheric particles can favor the growth of certain bacterioplankton groups of the ocean over others, as these changes will affect the ratio between primary and heterotrophic production, and consequently the concentration of atmospheric carbon that can be fixed (or released) in the surface layer of the ocean. As aerosol composition varies seasonally and locally, we evaluated the effect of both types of atmospheric particles on different locations of the northwestern Mediterranean and at different times of the year.
DOI: 10.15468/dl.f4ek2f
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ptilostemon afer",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 53 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008311-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/o39yg1
title: Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions

description: This study investigates this smallest plankton fraction (cells ≤ 3µm) in both prokaryotic and eukaryotic perspective considering changes of the community in the photic zone from coastal to open sea during mixed winter conditions. Using high-throughput sequencing of 16S and 18S rRNA genes along with flow-cytometry counts of bacteria, cyanobacteria and photosynthetic picoeukaryotes (PPEs) we described picoplanktonic community in the oligotrophic ecosystem. With pigment and lipid analyses of picoplankton community, we characterized PPEs and detected specific events in microbial loop. Prokaryotic community was dominated by Alphaproteobacteria, mainly SAR11 clade (44.91%), followed by Gammaproteobacteria (Oceanospirillales and Pseudomonadales, 14.96%), Bacteroidetes, mainly Flavobacteriales (13%), Cyanobacteria (Prochlorococcus and Synechococcus, 9.52%), Marinimicrobia, SAR406 clade (7.97%), Deltaproteobacteria (3.83%), Actinobacteria (2.24%) and Chloroflexi (1.90%). Picoeukaryotes, although the drivers of photosynthetic activity in oligotrophic systems, in this study were dominated by heterotrophic counterparts: Syndiniales, parasitic dinoflagellates (79.67%), other Dinophyta (8.7%) and on two depths Collodaria, family Sphaerozoidae (22.1%) and Polycistinea, Spumellarida (5.0%), while total photoautotrophic fraction of picoeukaryotes were represented with Mamiellophyceae, Stramenopiles, photoautotrophic Cryptophyta and some Haptophyta, together not exceeding 5% of total sequences. Heterotrophic bacteria and cyanobacteria, separated into populations of Prochlorococcus and Synechococcus, had abundances up to 7×105; 2.3×104 and 2.5×104 cells mL-1, respectively. Photoautotrophic picoeukaryotes were most abundant at P600-25m with 3×103 cells mL-1. According to pigment composition, the most prevalent phototrophs in picoplankton were Cyanobacteria and green algae.
DOI: 10.15468/yckoem
title: Characteristics of SOB community in Sediments from the East China Sea by high-throughput sequencing

description: The diversity and composition of SOB in sediments from the East China Sea was investigated based on the high-throughput sequencing analyses of the soxB gene
DOI: 10.15468/zu4hl7
title: sediment metagenome Raw sequence reads

description: This study demonstrated that Dehalococcoides could be employed as a promising biomarker to test the present of organohalides in wastestreams or other environmental samples.
DOI: 10.5281/zenodo.17116145
title: Supplementary Materials for "Automation of Scientific Publication Management in the JINR Digital Repository": Comparative Analysis and System Architecture Diagrams

description: This dataset contains the supplementary materials for the manuscript "Automation of Scientific Publication Management in the JINR Digital Repository": 

Table 1: Comparative Analysis of Functional Capabilities of Open-Source Scientific Publication Management Systems

Fig. 1. General Architecture of the Modular System for Automated Management of Scientific Publications

Fig. 2. Complex of Collection and Systematization of Scientific PublicationsFigure 3: Publication Import Workflow

Fig. 3. Publication Import Workflow

Fig. 4. Find Author Workflow

Fig. 5. JINR ECO System Sync Workflow

Fig. 6. Bulk Publication Collection Migration

Fig. 7. User Account Management

Fig. 8. Schema of Reactive Interaction Between Visualization Components
DOI: 10.5281/zenodo.17116144
title: Supplementary Materials for "Automation of Scientific Publication Management in the JINR Digital Repository": Comparative Analysis and System Architecture Diagrams

description: This dataset contains the supplementary materials for the manuscript "Automation of Scientific Publication Management in the JINR Digital Repository": 

Table 1: Comparative Analysis of Functional Capabilities of Open-Source Scientific Publication Management Systems

Fig. 1. General Architecture of the Modular System for Automated Management of Scientific Publications

Fig. 2. Complex of Collection and Systematization of Scientific PublicationsFigure 3: Publication Import Workflow

Fig. 3. Publication Import Workflow

Fig. 4. Find Author Workflow

Fig. 5. JINR ECO System Sync Workflow

Fig. 6. Bulk Publication Collection Migration

Fig. 7. User Account Management

Fig. 8. Schema of Reactive Interaction Between Visualization Components
DOI: 10.15468/nrgwjt
title: Microbial diversity of Oslo Fjord Pockmark sediments

description: The non-active pockmarks of the Oslo Fjord are excellent seabed features for studying the effects of geology on the microbial diversity. Geological features such as pockmarks effect the waterflow over the seabed. Here we studied the microbial communities from pockmarks sediments to understand how the diversity is affected by these structures.
DOI: 10.15468/dl.ykvec4
title: Occurrence Download

description: A dataset containing 483292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Geometry POLYGON((5.32321 32.03916,9.25474 32.03916,9.25474 89.08481,5.32321 89.08481,5.32321 32.03916))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vanessa atalanta"
 ]
}

 The dataset includes 483292 records from 679 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008259-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a6a8vu
title: Occurrence Download

description: A dataset containing 156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Netherlands",
 "DatasetKey is Observation.org, Nature data from around the World",
 "License is CC-BY-NC 4.0",
 "TaxonKey is Sphaerocarpos michelii"
 ]
}

 The dataset includes 156 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008313-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/4fgmz7
title: Diversity of archaeal amoA gene

description: Diversity of Archaeal amoA genes in sea water samples from Ardley cove, Fildes Peninsula, Antarctica
DOI: 10.15468/dl.hqtdf8
title: Occurrence Download

description: A dataset containing 24950 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maclura pomifera",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 24950 records from 254 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008314-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/ilai6f
title: Foraminifera Metagenome

description: Spatial patchiness is a natural feature that strongly influences the level of species richness we perceive in surface sediments sampled in the deep-sea. Recent environmental DNA (eDNA) surveys of benthic micro- and meiofauna confirmed this exceptional richness. However, it is unknown to which extent the results of these studies, based usually on few grams of sediment, are affected by spatial patchiness of deep-sea benthos. Here, we analyse the eDNA diversity of Foraminifera in 42 deep-sea sediment samples collected across different scales in the Southern Ocean.
DOI: 10.15468/6heyxn
title: Microbes (16S and 18S rRNA genes) from benthic Antarctic sediments

description: amplicon sequencing dataset (Illumina MiSeq) of microbial communities (16S and 18S rRNA genes) in 24 samples from benthic Antarctic sediments
DOI: 10.15468/ng8neb
title: Marine bacterial, archaeal and eukaryotic microbial communities on the continental shelf of the western Antarctic Peninsula

description: Amplicon sequencing dataset (454 pyrosequencing) of microbial Bacteria (16S ssu rRNA), Archaea (16S ssu rRNA) and Eukaryotes (18S ssu rRNA) in seawater on the continental shelf of the Antarctic Peninsula.
DOI: 10.15468/qczrid
title: marine metagenome Raw sequence reads

description: Raw bacterial 16S rRNA sequences from 3 North Atlantic water masses, amended and unamended with high molecular weight organic matter (cruise EN584).
DOI: 10.15468/axonsk
title: VIP_data_topsoil_jointsampling_microbiolgroups_2008_Heiko_Nacke

description: Original data comes from a project which takes or took place as part of the DFG priority program "Exploratories for large-scale and long-term functional biodiversity research". The data is stored together with descriptive metadata, in combination called a dataset, in the project repository (https://www.bexis.uni-jena.de). Species information was extracted from that original dataset. The second paragraph is part of the metadata of the original dataset.
In this data file 16S rRNA gene based analysis of forest and grassland soil procaryotic community composition and diversity "Schwaebische Alb" is stored. The data is intended to be used for synthesis of data associated with the joint soil sampling campaign 2008.
DOI: 10.15468/k07xmg
title: Prospecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia

description: Puna wetlands and salars are unique extreme environments since they are located in high altitude saline deserts, largely influenced by volcanic activity. UV radiation, arsenic content, high salinity, and low dissolved oxygen content, together with extreme daily temperature fluctuations and oligotrophic conditions comprise an environment that recreates the early Earth and even extraterrestrial conditions.