cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13743679
title: Evaluating Human Health Risks with Microbial Source Tracking and Quantitative Microbial Risk Assessment in Little Bay, Texas

description: These results are the median human health risks associated with a range of recreational activities (i.e., swimming, kayaking, fishing, boating, jet skiing) in Little Bay, Texas. The health risks were estimated based on a quantiative microbial risk assessment (QMRA) that was performed using enterococci concentrations as well as host-associated molecular marker (i.e., human, canine, gull) concentrations measured previously in Little Bay. These human health risks represent the probability of a gastrointestinal illness for recreators.
DOI: 10.6084/m9.figshare.27011326
title: CPI Hired Guns Scores Lithuania 2001, 2003, 2017 and 2021 and Ireland 2015 and 2023

description: These are the CPI scores for the lobbying regulation legislation in place in Lithuania and Ireland. Each of the Acts passed in Lithuaniaand Ireland, regulating lobbying, original and amended, are examined and scored here against the CPI's Hired Guns Index.
DOI: 10.15468/dl.ras5t8
title: Occurrence Download

description: A dataset containing 6355 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fungi and Lichens, Outer Hebrides"
 ]
}

 The dataset includes 6355 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014023-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aydq3u
title: Occurrence Download

description: A dataset containing 2260211 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Material sample, Specimen, Living Specimen, Human Observation, Occurrence evidence)",
 "Geometry POLYGON((-4.35551 55.37795,-1.76368 55.38358,-1.82186 56.66835,-4.35551 56.64955,-4.35551 55.37795))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 2260211 records from 172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013984-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26018434
title: ACE2 and CD47 Interactions to Regulate Fetal Growth

description: Placental insufficiency is associated with abnormal maternal and fetal outcomes. We previously demonstrated that angiotensin converting enzyme 2 (ACE2) knockout (KO) mice develop placental hypoxia at day 14 of gestation (GD14) as measured by photoacoustic imaging and higher expression of hypoxia markers (PMID: 28842425). Cell surface glycoprotein CD47 is induced by hypoxia and can disrupt inflammatory and nitric oxide pathways. Our data demonstrate that placental hypoxia is associated with upregulation of CD47, increase in superoxide production, and dysregulation of nitric oxide and IL-6-associated pathways. Our data also show that p62 protein levels increase in total placental homogenates of ACE2 KO mice. Accumulation of p62 indicates the potential inhibition of autophagy. Since CD47 can inhibit autophagy in renal and cancer cells, it is possible that increased CD47 downregulates the initiation of autophagy in the placenta of FGR mice. These studies established a novel mechanism leading to the development of fetal growth restriction which is dependent on ACE2 and CD47/TSP-1 interactions in the placenta.
DOI: 10.6084/m9.figshare.26018434.v1
title: ACE2 and CD47 Interactions to Regulate Fetal Growth

description: Placental insufficiency is associated with abnormal maternal and fetal outcomes. We previously demonstrated that angiotensin converting enzyme 2 (ACE2) knockout (KO) mice develop placental hypoxia at day 14 of gestation (GD14) as measured by photoacoustic imaging and higher expression of hypoxia markers (PMID: 28842425). Cell surface glycoprotein CD47 is induced by hypoxia and can disrupt inflammatory and nitric oxide pathways. Our data demonstrate that placental hypoxia is associated with upregulation of CD47, increase in superoxide production, and dysregulation of nitric oxide and IL-6-associated pathways. Our data also show that p62 protein levels increase in total placental homogenates of ACE2 KO mice. Accumulation of p62 indicates the potential inhibition of autophagy. Since CD47 can inhibit autophagy in renal and cancer cells, it is possible that increased CD47 downregulates the initiation of autophagy in the placenta of FGR mice. These studies established a novel mechanism leading to the development of fetal growth restriction which is dependent on ACE2 and CD47/TSP-1 interactions in the placenta.
DOI: 10.6084/m9.figshare.26018434.v2
title: ACE2 and CD47 Interactions to Regulate Fetal Growth

description: Placental insufficiency is associated with abnormal maternal and fetal outcomes. We previously demonstrated that angiotensin converting enzyme 2 (ACE2) knockout (KO) mice develop placental hypoxia at day 14 of gestation (GD14) as measured by photoacoustic imaging and higher expression of hypoxia markers (PMID: 28842425). Cell surface glycoprotein CD47 is induced by hypoxia and can disrupt inflammatory and nitric oxide pathways. Our data demonstrate that placental hypoxia is associated with upregulation of CD47, increase in superoxide production, and dysregulation of nitric oxide and IL-6-associated pathways. Our data also show that p62 protein levels increase in total placental homogenates of ACE2 KO mice. Accumulation of p62 indicates the potential inhibition of autophagy. Since CD47 can inhibit autophagy in renal and cancer cells, it is possible that increased CD47 downregulates the initiation of autophagy in the placenta of FGR mice. These studies established a novel mechanism leading to the development of fetal growth restriction which is dependent on ACE2 and CD47/TSP-1 interactions in the placenta.
DOI: 10.6084/m9.figshare.25213451.v1
title: Paleobotanical evidence for Mediterranean climates in the western Canadian paleoarctic during the late middle Eocene

description: The data provided here is for a paleoclimate and paleoenvironmental reconstruction of the Fifteenmile River fossil flora, located in west central Yukon Territory, Canada. The Fifteenmile River flora provides a record of a high latitude late middle Eocene forest ecosystem. Plant macrofossil collections were investigated to assess the paleoclimate of the forest. Provided here are the leaf data used for physiognomic paleoclimate analyses (Leaf Area Analysis, Leaf Margin Analysis, and CLAMP), and the CLAMP regression models used for the study. Additionally, we provide the climate data (means and standard deviations) for the modern plants that were used as nearest living relatives (NLR) for Bioclimatic Analysis of the fossil flora from Fifteenmile River. Furthermore, as the plants and plant data were sourced from the Global Biodiversity Information Facility (GBIF) and are available online (https://www.gbif.org) we provide the doi of each plant record sourced from the GBIF.
DOI: 10.6073/pasta/374ae16e29da50e75432871292675e5f
title: Multiple Element Limitation in Northeast Hardwood Ecosystems (MELNHE): Fresh Litter Chemistry

description: Freshly senesced leaf litter was collected during autumn in New Hampshire at the Bartlett Experimental Forest, Hubbard Brook Experimental Forest, and Jeffers Brook as part of the Multiple Elementation Limitation in Northern Hardwood Ecosystems (MELNHE) study. Leaf litter was collected in October of 2009, 2010, 2014, 2015, 2016, 2021, and 2022 at peak litterfall (i.e., mid-October) during a rain-free period. These leaf-litter samples were analyzed for nutrient concentrations for use in resorption analyses. 
 Besides adding 2021 and 2022 to the previous version of this data package, this version includes updated values for some samples from 2009 and 2010. Some were re-run to check unusual values, and 8 samples from 2010 for which fresh litter was not collected were estimated by analyzing litter samples collected in litter traps in the same plots in that year. These additions and corrections are indicated in the comments section of the data. 
 These leaf litter samples correspond with green foliage samples collected in late July and early August of the same years: the green foliage EDI package can be found at the following citation:
 Zukswert, J.M., S.D. Hong, K.E. Gonzales, C.R. See, and R.D. Yanai. 2024. Multiple Element Limitation in Northeast Hardwood Ecosystems (MELNHE): Foliar Chemistry 2008-2022 in Bartlett, Hubbard Brook, and Jeffers Brook ver 3. Environmental Data Initiative. https://doi.org/10.6073/pasta/cdf7e7456a8fd43a4e773ad286e4a2ff 
 
 These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
DOI: 10.15468/dl.8yd8dg
title: Occurrence Download

description: A dataset containing 240 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dalbergia cochinchinensis Pierre"
 ]
}

 The dataset includes 240 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014026-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/xf61-6461
title: Jordan Compact - Water Infrastructure: Final Data Set (Public)
DOI: 10.3886/3rn5-2r35
title: Jordan Compact - Water Infrastructure: Final Data Set (Public)
DOI: 10.48577/jpl.4c6tuc
title: A Pathway for Improved Cyber Resiliency for JPL’s F’ Open-Source Framework

description: A Pathway for Improved Cyber Resiliency for JPL’s F’ Open-Source Framework
DOI: 10.15468/dl.m8b6yw
title: Occurrence Download

description: A dataset containing 1472 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Cereus jamacaru DC."
 ]
}

 The dataset includes 1472 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014027-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jdk4ug
title: Occurrence Download

description: A dataset containing 22480 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-106.65791 24.22984,-105.57404 24.22984,-105.57404 25.26595,-106.65791 25.26595,-106.65791 24.22984))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (e2e717bf-551a-4917-bdc9-4fa0f342c530, ff90b050-c256-11db-b71b-b8a03c50a862, 84cee304-27b4-4ad0-9068-16b666e5b1b5, 90fd6680-349f-11d8-aa2d-b8a03c50a862, 7b8aff00-a9f8-11d8-944b-b8a03c50a862, bc092ff0-02e4-11dc-991f-b8a03c50a862, b459e790-0d3c-11d9-8431-b8a03c50a862, 61c539d8-47e0-4b82-875f-b95aad66dcd4, 3c6ad080-bdbe-11da-ac59-b8a03c50a862)"
 ]
}

 The dataset includes 22480 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014028-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7924/r4hm5fv5t
title: Data from: Comprehensive characterization of mitochondrial bioenergetics at different larval stages reveals novel insights about the developmental metabolism of Caenorhabditis elegans

description: Mitochondrial bioenergetic processes are fundamental to development, stress responses, and health. Caenorhabditis elegans is widely used to study developmental biology, mitochondrial disease, and mitochondrial toxicity. Oxidative phosphorylation generally increases during development in many species, and genetic and environmental factors may alter this normal trajectory. Altered mitochondrial function during development can lead to both drastic, short-term responses including arrested development and death, and subtle consequences that may persist throughout life and into subsequent generations. Understanding normal and altered developmental mitochondrial biology in C. elegans is currently constrained by incomplete and conflicting reports on how mitochondrial bioenergetic parameters change during development in this species. We used a Seahorse XFe24 Extracellular Flux (XF) Analyzer to carry out a comprehensive analysis of mitochondrial and non-mitochondrial oxygen consumption rates (OCR) throughout larval development in C. elegans. We optimized and describe conditions for analysis of basal OCR, basal mitochondrial OCR, ATP-linked OCR, spare and maximal respiratory capacity, proton leak, and non-mitochondrial OCR. A key consideration is normalization, and we present and discuss results as normalized per individual worm, protein content, worm volume, mitochondrial DNA (mtDNA) count, nuclear DNA (ncDNA) count, and mtDNA:ncDNA ratio. Which normalization process is best depends on the question being asked, and differences in normalization explain some of the discrepancies in previously reported developmental changes in OCR in C. elegans. Broadly, when normalized to worm number, our results agree with previous reports in showing dramatic increases in OCR throughout development. However, when normalized to total protein, worm volume, or ncDNA or mtDNA count, after a significant 2-3-fold increase from L1 to L2 stages, we found small or no changes in most OCR parameters from the L2 to the L4 stage, other than a marginal increase at L3 in spare and maximal respiratory capacity. Overall, our results indicate an earlier cellular shift to oxidative metabolism than suggested in most previous literature. 

Funding note: This work was funded by the National Institute of Health (R01ES028218, P42ES010356, R01ES034270). Some strains were provided by the Caenorhabditis Genetics Center, which is funded by NIH Office of Research Infrastructure Programs (P40 OD010440). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
DOI: 10.15468/dl.4xcrkp
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla bruceae Rydb."
 ]
}

 The dataset includes 180 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014029-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zmruh9
title: Occurrence Download

description: A dataset containing 12077 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Acer saccharum Marshall"
 ]
 },
 "HasCoordinate is TRUE",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2020",
 "DecimalLatitude is greater than or equal to 22.339412732727578",
 "DecimalLatitude is less than or equal to 56.478020942153016",
 "DecimalLongitude is greater than or equal to -89.38477198181909",
 "DecimalLongitude is less than or equal to -51.77540380141015",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 12077 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014030-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jd6awd
title: Occurrence Download

description: A dataset containing 7477 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myrmecophaga tridactyla Linnaeus, 1758"
 ]
}

 The dataset includes 7477 records from 221 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014032-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9x7dzc
title: Occurrence Download

description: A dataset containing 2360 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tapirus pinchaque (Roulin, 1829)"
 ]
}

 The dataset includes 2360 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014033-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15139/s3/cxg9fb
title: Data for Worthy et al., Spinal V1 inhibitory interneuron clades differ in birthdate, projections to motoneurons and heterogeneity Elife 2024

description: This ste has two files: 1) Worthy et al 2024 DataSet.xls : this file contains the data corresponding to each of the graphs presented in the paper 2) Analyses v2.xls : this file contains some of the raw data and analyses that resulted in the Dataset included in the figure graphs.
DOI: 10.15139/s3/m8qfp0
title: National Emission Inventory (NEI) 2016 modeling platform version 3

description: The 2016v3 emissions modeling platform was developed by EPA as an update to the 2016v2 platform. It incorporates updates made in response to comments by stakeholders, improved methods, some corrections, and refinements to projection factors due to data that has become available following the release of 2016v2. The 2016v3 platform incorporates emissions based on: MOVES3, the 2017 NEI nonpoint inventory, the 2019 NEI point source inventory, the Western Regional Air Partnership oil and gas inventory, and inventories for Canada and Mexico. The 2016v3 platform supports interstate transport analyses related to the 2015 Ozone NAAQS and other regulatory modeling applications. MCIP files are also available under the subdirectory: MCIP/WRFv3.8_12US1_2016_35aL/ File Location and Download Instructions: Link to NEI 2016v3 Emission Modeling Platform Data Download instructions
DOI: 10.15468/dl.sdjxx2
title: Occurrence Download

description: A dataset containing 1571 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ctenomorpha marginipennis Gray, 1833"
 ]
}

 The dataset includes 1571 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014034-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/a3ac-ny86
title: HST/STIS spectra for the VODKA follow-up objects
DOI: 10.15468/dl.txeutf
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla bruceae Rydb."
 ]
}

 The dataset includes 180 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014035-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hdhxg4
title: Occurrence Download

description: A dataset containing 1115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla breweri S.Watson"
 ]
}

 The dataset includes 1115 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014036-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7cfuuy
title: Occurrence Download

description: A dataset listing the 9 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sciurus carolinensis Gmelin, 1788"
 ]
}

 The dataset's 9 records were derived from 284 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014014-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26780110
title: Optimized phase functions and Zernike coefficients (Fig2).xlsx

description: This dataset includes optimization results for both CCAM and CCBM configurations, i.e., the Zernike coefficients and corresponding composed phase functions.
DOI: 10.6084/m9.figshare.26780140
title: theoretical precision and maximum-likelihood estimation results.xlsx

description: This dataset includes the theoretical precision predicted by the Cramer-Rao lower bound for the conventional 4Pi PSF, the CCAM-configured 4Pi PSF, the CCBM-configured 4Pi PSF and the non-interferometric methods of Tetrapod PSF and Airy-beam PSF. Additionally, a maximum-likelihood estimation result for the CCAM-configured 4Pi PSF and a simulated SMLM reconstruction result are also provided.
DOI: 10.6084/m9.figshare.26780140.v1
title: theoretical precision and maximum-likelihood estimation results.xlsx

description: This dataset includes the theoretical precision predicted by the Cramer-Rao lower bound for the conventional 4Pi PSF, the CCAM-configured 4Pi PSF, the CCBM-configured 4Pi PSF and the non-interferometric methods of Tetrapod PSF and Airy-beam PSF. Additionally, a maximum-likelihood estimation result for the CCAM-configured 4Pi PSF and a simulated SMLM reconstruction result are also provided.
DOI: 10.15468/dl.x6zzud
title: Occurrence Download

description: A dataset containing 32299 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Zornia J.F.Gmel."
 ]
}

 The dataset includes 32299 records from 474 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014037-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vundua
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diplodia tsugae (A.Funk) A.J.L.Phillips & A.Alves",
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada"
 ]
 },
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 }
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103050-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q5dprd
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Amphibia",
 "TaxonKey is Aves",
 "TaxonKey is Insecta",
 "TaxonKey is Reptilia",
 "TaxonKey is Mammalia",
 "TaxonKey is Chilopoda",
 "TaxonKey is Diplopoda",
 "TaxonKey is Arachnida"
 ]
 },
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation"
 ]
 },
 "HasCoordinate is true",
 "DecimalLongitude is greater than or equal to 140.000000",
 "DecimalLongitude is less than 145.000000",
 "DecimalLatitude is greater than or equal to 5.000000",
 "DecimalLatitude is less than 10.000000",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 19 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002704-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-63582
title: Redemption tidings, vol. 43, nos. 1-52, 6 Jan. - 28 Dec. 1967

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle for vol. 43, nos. 1-39 (6 Jan. - 29 Sept. 1967).