cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/vtkbj2yp7p
title: MS/MS data

description: This data is for the manuscript "Investigating the differential structural organization and gene expression regulatory networks of lamin A Ig fold domain mutants of muscular dystrophy." by Subarna Dutta1,2 ,Vikas Kumar 3 ,Arnab Barua4, Madavan Vasudevan2 .1 Department of Biochemistry,University of Calcutta , 35, Ballygunge circular road , Kolkata- 700019.West Bengal. India
2 Theomics International Private Limited.28, Income Tax Layout, Sadananda Nagar, NGEF Layout, Bengaluru – 560038.India
 3 UMass Chan Medical School.Mass Spectrometry Facility.222 Maple Avenue Shrewsbury, Massachusetts 01545
4 Tata Institute of Fundamental Research, Hyderabad - 500046, India 


Correspondence:

suborna.dutta@gmail.com, madavan@theomics.com
DOI: 10.3535/46p-k0j-3e4
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dk6-jq9-0n3
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/25q-wk4-yc2
title: †Phymatopleuridae Batten, 1956

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kq3-6fh-v5n
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27902439.v1
title: bicycle

description: Data for Bicycle Cycling Behavior and Attentiveness on University Campuses
DOI: 10.3535/1sy-a6v-9pf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nqw-hbc-tt4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16798174.v1
title: Monitoring protein conformational changes using fluorescent nanoantennas

description: Fluorescent nanoantennas generated a transient fluorescence "spike" during the hydrolysis of a substrate by calf intestinal alkaline phosphatase (AP). With AP, these fluorescent nanoantennas were used to characterize:1) the hydrolysis of 15 substrates2) the hydrolysis of one substrate in the presence of six effectors<br>The substrates were <i>p­</i>-nitrophenylphosphate (pNPP), 4-methylumbelliferylphosphate (4MUP), pyrophosphate (PPi), β-glycerophosphate (BGP), phosphoenolpyruvate (PEP), L-phosphoserine (PSer), pyridoxal 5'-phosphate (PLP), D-glucose-6-phosphate (G6P), D-fructose-6-phosphate (F6P), adenosine 5'-monophosphate (AMP), adenosine 5'-diphosphate (ADP), adenosine 5'-triphosphate (ATP), guanosine 5'-triphosphate (GTP), phosphocreatine (PCr), and amifostine.<br>The effectors were the competitive inhibitors phosphate, molybdate, tungstate, arsenate, and vanadate, as well as magnesium ion. These were used with the substrate amifostine.<br>The 12-nucleotide nanoantenna used here has biotin at 5′ and fluorescein (FAM) at 3′. The excitation (λ<sub>ex</sub>) and emission (λ<sub>em</sub>) wavelengths were 498 nm and 520 nm, respectively. Conditions were [nanoantenna] = 150 nM, [streptavidin] = 50 nM, [biotinylated AP] = 20 nM, [substrate] = 300 μM, and as applicable, [inhibitor] = 30 μM or [Mg<sup>2+</sup>] = 5 mM. The buffer was 100 mM Tris, 10 mM NaCl, pH = 8.0, and temperature = 37 °C. All measurements were recorded in triplicate.<br>See associated paper for details about the procedure and reagents.
DOI: 10.3535/sdx-zrb-wtj
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12525242.v1
title: kraken2_human_and_phiX_db

description: kraken2_human_and_phiX_db<br>created on 19-June, as detailed here: https://hackmd.io/@cov-irt/kraken2-read-filtering
DOI: 10.6084/m9.figshare.c.3903661_d9.v1
title: Additional file 5: Table S3. of Chromatin states responsible for the regulation of differentially expressed genes under 60Co~Îł ray radiation in rice

description: Summary of GO terms corresponding to up- and down-regulated genes. (XLS 326 kb)
DOI: 10.17632/6ngrrxcsv8
title: SATIN - Sains dan Teknologi Informasi

description: SATIN - Sains dan Teknologi Informasi adalah Jurnal Lembaga Penelitian dan Pengabdian kepada Masyarakat (LPPM) STMIK-AMIK Riau.
DOI: 10.3535/90n-fcg-dr7
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wjz-jhk-1zr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f5v-emh-4vn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n7l-e7n-y4f
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19518976.v1
title: QuasiFlow: Supplementary File 1 (.tar.gz)

description: Compressed zip file containing the following HTML reports• <i>1-mut_rec.html</i>: QuasiFlow report for mut_rec synthetic reads.• <i>2-MUT_REC.html</i>: QuasiFlow report for MUT_REC synthetic reads.• <i>3-Comparative_Report_SyntheticReads.html</i>: QuasiComparer comparative report for all synthetic reads• <i>4-Control_TYLCV.html</i>: QuasiComparer comparative report for the control of TYCLV-Mld replicated in vitro.• <i>5-Tomato_TYLCV-invected.html</i>: QuasiFlow report for TYCLV samples from tomato-infected cells.• <i>6-Comparative_Report_Mitochondria.html:</i> QuasiComparer comparative report for mtDNAs.
DOI: 10.6084/m9.figshare.3166798.v2
title: PLOS One Data - Accompanies "The Broad Reach of Online Extremism: Understanding the ISIS Supporting Community on Twitter"

description: This Dataset accompanies:<br>Benigni, Matthew, Joseph, Kenneth, and Carley, Kathleen. n.d. “Online Threat-Group-Supporting Community Detection: Uncovering the ISIS Supporting Community on Twitter.” Under Review Plos One.<br>and can be analyzed using R source code provided at: https://github.com/mbenigni/OSNThreatGroups<br>The following files are contained in this dataset:<br>Files:deIdentified_attributes.csv - contains node attribute information for users associated with the 2 hop snowball sample described in the aformantioned work. The file contains the following fields: anonID,followingCount,followerCount,tweetCount,lastTweet,creation_date,lang,suspended,official. AnonID refers to a unique identifier assigned to each user and corresponds to nodes in the provided edge lists. The suspended field refers to accounts that were suspended by Twitter between NOV14 and MAR15. Some of these suspended accounts were used as positive case labels. A full explanation is provided in the article. The official field refers to a list of human verified media, government, and celebrity accounts used to train the 'official classifier' in our presented work. All other fields correspond to fields provided by the Twitter API.<br>deIdentified_friend_edges.csv - a directed network edge list of the following or friend ties associated with all nodes listed in deIdentified_attributes.csv.<br>deIdentified_mention_edges.csv - a directed network edge list of the mention ties associated with all nodes listed in deIdentified_attributes.csv. Additionally epoch time for each edge is provided in the 'date' field.<br>deIdentified_user_ht_edges.csv - a bipartite network edge list of the user to hash tag ties associated with all nodes listed in deIdentified_attributes.csv. Additionally epoch time for each edge is provided in the 'date' field.<br><br><br>
DOI: 10.3535/3ga-cfj-l4t
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rdv-48g-4hc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16822054.v1
title: Raw data for: "Identifying optimal cycles in quantum thermal machines with reinforcement-learning"

description: Raw data used to produce figures and results presented in the paper "Identifying optimal cycles in quantum thermal machines with reinforcement-learning" by P. A. Erdman and F. Noé.
DOI: 10.3535/8m4-x7b-hlr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fk0-7fy-vrk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/42b-w7s-p0d
title: †Oepikina Salmon, 1942

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l6k-zkj-qec
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22492246.v1
title: data from xiao et al. submitted to GBC

description: Paper data from Xiao et al. submitted to Global Biogeochemical Cycles.
DOI: 10.3535/bl0-hmk-3wj
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vnq-57y-qjc
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26351959.v1
title: Intron Gff annotations

description: Gff annotations representing Intron CM matches, predicted gene (exon/intron) structures and exact intron borders observed in split-mapped reads. Generated using "find_introns.py" and "confirm_introns.py" from the associated GitHub repository.
DOI: 10.6084/m9.figshare.5099317.v1
title: Comparing a lemma list with a frequency wordlist from a reference corpus

description: A comparison between a lemma list derived from a Spanish as a Foreign Languaje textbook and a wordlist. The textbook is called 'Dicho y hecho' (Gonzalez C. et al. (2014) <i>Dicho y hecho (tomos 5 y 6). Español como lengua extranjera. </i>Centro de Enseñanza para Extranjeros-Universidad Nacional Autónoma de México. México.) and the wordlist was created from the 'Corpus del español' (Davies, M. (2002-) Corpus del Español: 100 million words, 1200s-1900s. Available online at http://www.corpusdelespanol.org.)
DOI: 10.3535/sg0-zrn-l6n
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jkg-e4f-mn4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vf7-epx-atx
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.4762483.v1
title: AFM rr

description: rr noise
DOI: 10.3535/b6w-22t-zer
title: †Temnodiscus Koken, 1896

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s6z-vy7-dcm
title: Chloanthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21571701.v1
title: Supplementary Material for: The Immunomodulatory Potential Role of Mesenchymal Stem Cells in Diseases of the Central Nervous System

description: Introduction: Several studies indicate the role of mesenchymal stem cells (MSCs) as an important tool in regenerative medicine associated with injuries that affect the central nervous system (CNS). The MSCs have the capacity to differentiate into cells of the embryonal tissue, such as the mesoderm. So, these cells can be found in a variety of tissues. Also, the MSCs can release immunomodulatory and neurotrophic factors performance as inflammation mediators operating in injured tissue the regeneration. Furthermore, they can differentiate into neural, like cells in vitro. Thereby, because of the high immunomodulatory role of MSCs, this review sought to describe the main immunomodulatory mechanisms performed by MSCs in CNS recovery after tissue injury or neurodegenerative diseases. Methods: PubMed and ScienceDirect were searched between January 2011 to March 2021 and 43 articles met the criteria of the review. Results: This systematic review indicate that MSCs were used in vivo experimental Multiple Sclerosis (MS), Parkinson's disease (PA), Alzheimer's disease (AD), Amyotrophic Lateral Sclerosis (ALS), Ischemic Stroke (IS) and Traumatic Brain Injury (TBI). The treatment MSCs were usually from human origin, derived from bone marrow and administered intravenously. Discussion/Conclusion: It was shown that MSCs, independent from origin or administration pathway, can reduce inflammation and help in the recovery and preservation of injured neural tissue. Thus, the use of MSCs represents a potential therapeutic option in the treatment of neurological disorders mediated by inflammatory processes.
DOI: 10.3535/2gw-es1-92e
title: Quartz

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gat-z1y-zbj
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28395545.v1
title: Reservoir-assisted quantum battery charging at finite temperatures

description: This is a dataset for "Reservoir-assisted quantum battery charging at finite temperatures "
DOI: 10.6084/m9.figshare.c.3691690_d8.v1
title: Additional file 1: of Screening and evaluating of long noncoding RNAs in the puberty of goats

description: The production of reads from the Illumina HiSeq 4000 platform. (XLSX 9Â kb)
DOI: 10.3535/hrh-8t8-2x8
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ry7-b1k-nfc
title: Agate

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16867249.v3
title: Ties that bind data

description: In this folder there is the data to replicate the paper "The ties that bind and transform: knowledge remittances, relatedness, and the direction of technical change". In the folder there is a .dta file that contains the data in Stata format, and an .xls file that provides a description of the variables.
DOI: 10.6084/m9.figshare.21555927.v2
title: <strong>Moderated Mediation Research Data</strong> - Inhibition on irrelevant negative information alleviates the mediating role of psychological distress in the association between trait rumination and symptoms of depression and anxiety

description: This data contains research data that were analyzed and reported in the main paper.
DOI: 10.3535/5k9-5nw-hqq
title: †Trilobita

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xm7-qp4-xdd
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/vf6jmvz83b
title: Pre-trained Flair and BERT weights (Spanish biomedical literature, SciELO) and corpus

description: This zipped folder includes pre-trained weights of BERT and Flair models. Both models were trained from scratch on Spanish biomedical literature texts obtained from SciELO website. The corpus on which the models were trained is also included. It consists of over 86B tokens. More details on the corpus and training process could be found in our paper "Testing Contextualized Word Embeddings to Improve NER in Spanish Clinical Case Narratives", doi: 10.21203/rs.2.22697/v2
DOI: 10.3535/b4v-6vh-1at
title: Agate

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mp4-563-zfb
title: Agate

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28557611.v1
title: NHANES 2007-2008 至 2015-2016 匿名数据集

description: This dataset includes participants from five consecutive survey cycles (NHANES 2007 - 2008 to 2015 - 2016). A total of 20,804 eligible subjects were included in the analysis. It encompasses age, gender, serum uric acid levels, education level, physical activity level, smoking status, drinking status, income, creatinine, race/ethnicity, body mass index, and albumin/creatinine ratio. The main purpose of this dataset is to investigate the gender - specific associations between serum uric acid levels and depression among US adults.
DOI: 10.6084/m9.figshare.5598037.v1
title: bigdata-province-granada

description: bigdata-province-granada in json from 2010 in "Palacio de Congresos"
DOI: 10.17632/7tn5r2rhk8
title: Supplementary Figure 2 AGEP Patient Case 7

description: Supplementary Figure 2 of AGEP Patient Case 7 with clinical and histopathologic images
DOI: 10.3535/4y4-0fn-n1z
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dxb-6md-rz9
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j7y-4p7-qyk
title: †Chaetetes Fischer, 1830

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mk0-ep8-e44
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/97c-k7p-jq6
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a76-d99-wgj
title: †Orthoceras Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8jw-6np-l9l
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9eq-t9l-b6f
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25378/janelia.5527447.v1
title: MouseLight Neuron AA0182

description: A vast neural tracing effort by a team of Janelia scientists has upped the number of fully-traced neurons in the mouse brain by a factor of 10. Researchers can now download and browse the data in three dimensions. <br>Inside the mouse brain, individual neurons zigzag across hemispheres, embroider branching patterns and, researchers have now discovered, can even spool out spindly fibers up to 45 centimeters long.<br>Scientists can see and explore these wandering neural traces in 3-D in the most detailed map of mouse brain wiring yet created. The map reconstructs the shape and position of more than 300 of the 70 million neurons in the mouse brain. Previous efforts to trace the path of individual neurons had topped out in the dozens. <br>The selectively-labeled neurons were mapped in an iterative process with two-photon microscopy. The brain is sliced in 200-micron sections and a few dozen neurons are labeled at a time and imaged. Each brain imaged yields about 50 terabytes of data, each containing mapped neurons which can be browsed via the NeuronBrowser application. Researchers interested in the complete raw data set should contact Janelia to discuss obtaining it via hardware transfer.
DOI: 10.3535/48z-ee0-j3v
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ftc-e7j-xr3
title: Marcasite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12827381.v1
title: Boundary file for online simulation

description: This file is input as boundary info in a simulation of the north Gulf of Mexico.
DOI: 10.3535/ft2-gn4-ksx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lj0-nj1-lft
title: Malachite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16734958.v1
title: Al2O3_e90-e135.7z

description: Abundance and distribution of oxide abundances and Mg# values generated from KAGUYA multiband imager (MI) spectra<br>
DOI: 10.6084/m9.figshare.c.3843514_d2.v1
title: Additional file 2: Table S2. of Genome-wide microRNA expression profiling in placentae from frozen-thawed blastocyst transfer

description: List of TaqMan probe ID numbers. (XLS 29Â kb)
DOI: 10.3535/dnj-ddl-ng0
title: †Holopea J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fgx-0xs-61d
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23498491.v1
title: Master data for the control group and the test group.xlsx

description: This dataset includes three files: Master data for the control group and the test group Results table Sample size calculation <br> <br> <br>
DOI: 10.3535/4rh-a49-nav
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p8f-t0f-lwv
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14634591.v1
title: AQI and PM2.5,SO2,NO2 air pollutants.xls

description: 2016-2019 Chian Beijing-tianjin-Heibei area average AQI and concentrations of air pollutants.
DOI: 10.3535/ad0-ltm-vd5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kqe-ttv-mmz
title: †Asaphus (Neoasaphus) cornutus (Pander, 1830)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c1b-fbn-24f
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ng3-9d1-xcw
title: †Asaphus (Neoasaphus) platyurus (Angelin, 1854)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e7e-4ld-0la
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1sy-tkb-m2m
title: †Orthoceras Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3zb-t2j-a15
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bf6-ppf-brb
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.