cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.getv79
title: Occurrence Download

description: A dataset containing 3050 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cervus nippon Temminck, 1838",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 3050 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023745-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tbhtef
title: Occurrence Download

description: A dataset containing 1486 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tlalocohyla picta (Günther, 1901)"
 ]
}

 The dataset includes 1486 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023747-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8szee
title: Occurrence Download

description: A dataset containing 8158 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-91.87107 57.35879,-96.99599 53.80436,-95.37759 48.86754,-89.17375 47.79162,-83.6892 46.13506,-82.16071 43.97594,-83.06118 41.90256,-81.42585 41.84721,-77.56053 43.64836,-73.92199 45.00743,-80.54939 54.02587,-81.23974 57.59192,-91.87107 57.35879))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cicindela Linnaeus, 1758"
 ]
}

 The dataset includes 8158 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023746-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9kazhz
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Manis pentadactyla Linnaeus, 1758",
 "Year 1901-2024"
 ]
}

 The dataset includes 76 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023748-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9pujr
title: Occurrence Download

description: A dataset containing 269 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lycodonus flagellicauda (Jensen, 1902)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 269 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023750-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.agapfk
title: Occurrence Download

description: A dataset containing 55032 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 55032 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023738-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24765105.v1
title: Sdh1 43-96 DMS pilot

description: WT-normalized log2-Effect Scores for pilot DMS analysis of yeast Sdh1 variants.
DOI: 10.6084/m9.figshare.24765240.v1
title: HAP1 SDHA<sup>KO </sup>variant functional data

description: Functional data for SDHA variants in SDHA-knockout cell line
DOI: 10.15468/dl.4zzzff
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sebastes mentella Travin, 1951",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 451 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023751-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2z4k6r
title: Occurrence Download

description: A dataset containing 1787 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amblyraja hyperborea (Collett, 1879)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1787 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023752-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4s6gn5
title: Occurrence Download

description: A dataset containing 291 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salvia greatae Brandegee"
 ]
}

 The dataset includes 291 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023753-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5x05xq9q
title: MassIVE MSV000096609 - GNPS - NASTE DOM and coral tissue nutrient dosing experiment
title: Dissolved organic matter and coral tissue metabolites from a three, three week nutrient dosing experiment using an inorganic nutrient mixture, bird guano, or effluent. DOM and tissue metabolites were from either Porites or Montipora coral treatments. The first three weeks just dosed the corals with nutrients, the following increased temperatures to simulate future warming conditions, and the last three were a recovery period. Untargeted LC-MS/MS acquisition was performed on a Vanquish Flex UHPLC system coupled to an Orbitrap Exploris 240 (Thermo Fisher Scientific, Bremen, Germany). Chromatographic separation was performed on a Kinetex 1.7 um 100 A pore size C18 reversed phase UHPLC column 150 x 2.1 mm (Phenomenex, Torrance, CA).
DOI: 10.15468/dl.ajdgkx
title: Occurrence Download

description: A dataset containing 410 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-69.79474 19.33124,-69.7773 19.29886,-69.78602 19.2727,-69.78104 19.25028,-69.80097 19.19797,-69.83335 19.19548,-69.84083 19.17306,-69.81965 19.15189,-69.75115 19.14691,-69.72873 19.09335,-69.13462 19.14442,-69.15081 19.36985,-69.79474 19.33124))",
 "TaxonKey is Liliopsida"
 ]
}

 The dataset includes 410 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023754-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vwhvrg
title: Occurrence Download

description: A dataset containing 1639 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bathyraja spinicauda (Jensen, 1914)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1639 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023755-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14291857
title: Tracing Vulnerabilities in Maven: A Study of CVE Life Cycles and Dependency Networks Study Results
DOI: 10.5281/zenodo.14291858
title: Tracing Vulnerabilities in Maven: A Study of CVE Life Cycles and Dependency Networks Study Results
DOI: 10.5281/zenodo.6975541
title: Crystal structure prediction of host-guest supramolecular systems based on β-cyclodextrin dimers and trimers with luminescent probes

description: Here are the necessary files for theGromacs molecular dynamics of the  systems from the article"Crystal structure prediction of host-guest supramolecularsystems based on β-cyclodextrin dimers and trimers with luminescent probes".The structure files of the four main systemsN2@CD2[A], PH-TBB2@CD2[A], PH-TBB2@CD3[B] and PH-TBB2@CD3[C]are contained in the tar.gz archivesN2-CD2-A, PH-TBB2-CD2-A, PH-TBB2-CD3-B and PH-TBB2-CD3-C respectively.The content of the archive reflects the MD workflow performed:start.gro - the initial structure obtained by replacing the CD content with the luminescent probe;em.gro - the structure after energy minimization;nvt.gro - the structure after NVT step;npt.gro - the structure after NPT step;topol.top - the system topology file.The included topology ofnaphthalene, phenanthrene, tert-butylbenzene and β-cyclodextrinare in the filesnaft.itp, pantr.itp, tbb.itp, cd-charmm.itp.Their position restraints are inposre-naft.itp, posre-pantr.itp, posre-tbb.itp, posre-cd.itp.Run parameters for EM, NVT and NPT steps are in the files em.mdp, nvt.mdp, npt.mdp.CHARRMM-36 force field is in charmm36.ff.tar.gz.

 
description: Semiisotropic pressure barostat parameters of PH-TBB2@CD3[B] crystal are in its own archive.
DOI: 10.5281/zenodo.6975542
title: Crystal structure prediction of host-guest supramolecular systems based on β-cyclodextrin dimers and trimers with luminescent probes

description: Here are the necessary files for theGromacs molecular dynamics of the  systems from the article"Crystal structure prediction of host-guest supramolecularsystems based on β-cyclodextrin dimers and trimers with luminescent probes".The structure files of the four main systemsN2@CD2[A], PH-TBB2@CD2[A], PH-TBB2@CD3[B] and PH-TBB2@CD3[C]are contained in the tar.gz archivesN2-CD2-A, PH-TBB2-CD2-A, PH-TBB2-CD3-B and PH-TBB2-CD3-C respectively.The content of the archive reflects the MD workflow performed:start.gro - the initial structure obtained by replacing the CD content with the luminescent probe;em.gro - the structure after energy minimization;nvt.gro - the structure after NVT step;npt.gro - the structure after NPT step;topol.top - the system topology file.The included topology ofnaphthalene, phenanthrene, tert-butylbenzene and β-cyclodextrinare in the filesnaft.itp, pantr.itp, tbb.itp, cd-charmm.itp.Their position restraints are inposre-naft.itp, posre-pantr.itp, posre-tbb.itp, posre-cd.itp.Run parameters for EM, NVT and NPT steps are in the files em.mdp, nvt.mdp, npt.mdp.CHARRMM-36 force field is in charmm36.ff.tar.gz.

 
description: Semiisotropic pressure barostat parameters of PH-TBB2@CD3[B] crystal are in its own archive.
DOI: 10.15468/dl.h2tzgs
title: Occurrence Download

description: A dataset containing 4985 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-125.81014 27.93741,-68.08812 27.93741,-68.08812 48.36185,-125.81014 48.36185,-125.81014 27.93741))",
 "TaxonKey is Bromus tectorum"
 ]
}

 The dataset includes 4985 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001579-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/gbh29pspxn
title: Dataset on Coastal Scenery Assessment using the Coastal Scenic Evaluation System in Tasikmalaya and Garut, Indonesia

description: This dataset presents the application of the Coastal Scenic Evaluation System (CSES) at seven beaches along the coasts of Tasikmalaya and Garut, Indonesia, which directly face the Indian Ocean. The system was developed to reduce subjectivity in coastal landscape classification and has been widely used in many countries, although its application in Indonesia remains limited. The dataset includes ratings of 18 physical parameters and 8 human parameters obtained through field observations and processed with CSES V1-2018, a generic open-source MATLAB® code. The outputs provided are text files, rating tables, bar charts, weighted average graphs, membership degree curves, and D-index classifications for each surveyed beach. This dataset is useful as a baseline for coastal condition evaluation, supporting conservation area management, beach tourism development, and comparative analysis with other coastal landscapes worldwide.
DOI: 10.17632/gbh29pspxn.1
title: Dataset on Coastal Scenery Assessment using the Coastal Scenic Evaluation System in Tasikmalaya and Garut, Indonesia

description: This dataset presents the application of the Coastal Scenic Evaluation System (CSES) at seven beaches along the coasts of Tasikmalaya and Garut, Indonesia, which directly face the Indian Ocean. The system was developed to reduce subjectivity in coastal landscape classification and has been widely used in many countries, although its application in Indonesia remains limited. The dataset includes ratings of 18 physical parameters and 8 human parameters obtained through field observations and processed with CSES V1-2018, a generic open-source MATLAB® code. The outputs provided are text files, rating tables, bar charts, weighted average graphs, membership degree curves, and D-index classifications for each surveyed beach. This dataset is useful as a baseline for coastal condition evaluation, supporting conservation area management, beach tourism development, and comparative analysis with other coastal landscapes worldwide.
DOI: 10.13145/bacdive19615.20230509.8.1
title: Myxococcus fulvus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive19615.20251217.10
title: Myxococcus fulvus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0087101.10fu
title: SH0087101.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive19616.20230509.8.1
title: Myxococcus fulvus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive19616.20251217.10
title: Myxococcus fulvus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0087102.10fu
title: SH0087102.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive19617.20230509.8.1
title: Myxococcus fulvus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0087103.10fu
title: SH0087103.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive19617.20251217.10
title: Myxococcus fulvus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive19618.20230509.8.1
title: Corallococcus coralloides

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0087104.10fu
title: SH0087104.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive19618.20251217.10
title: Corallococcus coralloides

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0087105.10fu
title: SH0087105.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive19619.20230509.8.1
title: Polyangium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive19619.20251217.10
title: Polyangium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0087106.10fu
title: SH0087106.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive19620.20230509.8.1
title: Myxococcus fulvus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive19620.20251217.10
title: Myxococcus fulvus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0087107.10fu
title: SH0087107.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.