cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.uraqsg
title: Occurrence Download

description: A dataset containing 129975 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micropterus salmoides (Lacepède, 1802)"
 ]
}

 The dataset includes 129975 records from 206 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107589-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v96ah9
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudoblothrus oromii Mahnert, 1990"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057033-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lfxywo
title: Occurrence Download

description: A dataset containing 24760 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "InstitutionCode is nhmuk",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 24760 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016353-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mbr55n
title: Occurrence Download

description: A dataset containing 3472 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 {
 "or" : [
 "TaxonKey is Sticherus bifidus (Willd.) Ching",
 "TaxonKey is Gleichenia bifida (Willd.) Spreng.",
 "TaxonKey is Mertensia bifida Willd.",
 "TaxonKey is Mertensia decurrens Raddi",
 "TaxonKey is Mertensia pubescens Humb. & Bonpl. ex Willd.",
 "TaxonKey is Mertensia trifurcans Fée",
 "TaxonKey is Sticherus decurrens (Raddi) J.Gonzales"
 ]
 }
 ]
}

 The dataset includes 3472 records from 160 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0255439-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2x8629
title: Occurrence Download

description: A dataset containing 184 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diplazium drepanolobium A.R.Sm."
 ]
}

 The dataset includes 184 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057035-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vobvh3
title: Occurrence Download

description: A dataset containing 168821 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Myiopsitta monachus (Boddaert, 1783)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 168821 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016362-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ddqvzx
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "Country is Mexico",
 "TaxonKey is Agave multifilifera Gentry"
 ]
}

 The dataset includes 49 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0122673-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9evh8m
title: Occurrence Download

description: A dataset containing 24120 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pterois volitans (Linnaeus, 1758)"
 ]
}

 The dataset includes 24120 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016361-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzkhsx
title: Occurrence Download

description: A dataset listing the 86415 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 86415 records were derived from 1864 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107584-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/9gwbtp
title: A new and the second fossil species of the genus Ephedrus Haliday, 1833 (Hymenoptera: Braconidae: Aphidiinae) from Baltic amber

description: This dataset contains the digitized treatments in Plazi based on the original journal article Davidian, Elena M., Manukyan, Andranik R., Belokobylskij, Sergey A. (2023): A new and the second fossil species of the genus Ephedrus Haliday, 1833 (Hymenoptera: Braconidae: Aphidiinae) from Baltic amber. Zootaxa 5297 (4): 587-593, DOI: 10.11646/zootaxa.5297.4.8, URL: http://dx.doi.org/10.11646/zootaxa.5297.4.8AbstractA new species of aphid parasitoid, Ephedrus carsteni Davidian, sp. nov. (Braconidae: Aphidiinae), is described and illustrated from Late Eocene Baltic amber. This new species was compared with the fossil Ephedrus mirabilis Timon-David, 1944 (Oligocene imprint from Bassin de Marseille), E. primordialis Brues, 1933 (Eocene Baltic amber) and E. rasnitsyni Davidian & Kaliuzhna, 2021 (Eocene Sakhalinian amber), as well as with the extant E. validus (Haliday, 1833) and E. carinatus Tomanović, 2020.
DOI: 10.15468/crudj3
title: Proposal of a new family for Hirodai ohtsukai gen. n. et sp. n. (Crustacea: Copepoda) infesting Uranoscopus guttatus Cuvier, 1829 (Perciformes: Uranoscopidae) from the south-west coast of India

description: This dataset contains the digitized treatments in Plazi based on the original journal article Aneesh, Panakkool Thamban, Helna, Ameri Kottarathil, Kumar, Appukuttannair Biju, Venmathi Maran, Balu Alagar (2023): Proposal of a new family for Hirodai ohtsukai gen. n. et sp. n. (Crustacea: Copepoda) infesting Uranoscopus guttatus Cuvier, 1829 (Perciformes: Uranoscopidae) from the south-west coast of India. Journal of Natural History 57 (33 - 36): 1495-1515, DOI: 10.1080/00222933.2023.2259556, URL: http://dx.doi.org/10.1080/00222933.2023.2259556
DOI: 10.15468/97ubzd
title: Descriptions of two new species of American Cerambycidae, and redescription of Leptostylus subfurcatus (Cerambycidae, Coleoptera)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Heffern, Daniel, Santos-Silva, Antonio (2023): Descriptions of two new species of American Cerambycidae, and redescription of Leptostylus subfurcatus (Cerambycidae, Coleoptera). Zootaxa 5343 (4): 338-352, DOI: 10.11646/zootaxa.5343.4.2, URL: http://dx.doi.org/10.11646/zootaxa.5343.4.2AbstractTwo new species are described: Aneflus (Aneflus) monzoni sp. nov. (Cerambycinae, Elaphidiini), from Guatemala; and Aegomorphus personatus sp. nov. (Lamiinae,Acanthoderini), from Mexico. Leptostylus subfurcatus Bates, 1880 is redescribed based on a female from Panama, and a variation of the outer apex of the metafemora is reported for the first time.
DOI: 10.15468/dl.uer36v
title: Occurrence Download

description: A dataset listing the 19 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhinolophus ferrumequinum (Schreber, 1774)"
 ]
}

 The dataset's 19 records were derived from 1619 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016993-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mfh9ju
title: Occurrence Download

description: A dataset containing 1797 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Utricularia resupinata B.D.Greene ex Hitchc."
 ]
}

 The dataset includes 1797 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027309-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eq8hvn
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oplophoridae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027311-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wuntfq
title: Occurrence Download

description: A dataset containing 1611 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-144.00262 4.61522,-51.99738 4.61522,-51.99738 41.38478,-144.00262 41.38478,-144.00262 4.61522))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phrynosoma orbiculare (Linnaeus, 1758)"
 ]
}

 The dataset includes 1611 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027313-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3nkbcf
title: Occurrence Download

description: A dataset containing 562 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Utricularia striata Leconte ex Torr."
 ]
}

 The dataset includes 562 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027315-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cnebha
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Luidiidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 64 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027316-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9266fb
title: Occurrence Download

description: A dataset containing 348 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glossostigma cleistanthum W.R.Barker"
 ]
}

 The dataset includes 348 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027319-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6cf9d5
title: Occurrence Download

description: A dataset containing 688 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asteriidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 688 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027320-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mxr5z9
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-160.54128 15.20101,-61.45872 15.20101,-61.45872 54.79899,-160.54128 54.79899,-160.54128 15.20101))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Phrynosoma platyrhinos Girard, 1852"
 ]
}

 The dataset includes 12 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027322-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uvb27x
title: Occurrence Download

description: A dataset containing 1001 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glossostigma diandrum (L.) Kuntze"
 ]
}

 The dataset includes 1001 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027321-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3q6sfg
title: Occurrence Download

description: A dataset containing 8401970 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-115.50969 34.40818,-109.36996 34.40818,-109.36996 38.17234,-115.50969 38.17234,-115.50969 34.40818))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 8401970 records from 753 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027262-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pv43wn
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mimulus dentilobus B.L.Rob. & Fernald"
 ]
}

 The dataset includes 101 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027324-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y52ctn
title: Occurrence Download

description: A dataset containing 402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Enoploteuthidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 402 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027325-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10867209
title: Blood memory CD8 T cell phenotypes in lung cancer patients predict immune checkpoint treatment responses

description: Rscript for figure generation and data analysis:

GenerateFigures.R

 

Seurat objects containing processed data after quality control:

NCCS_For_Zenodo.RDS - NCCS discovery cohort.

Pavia_For_Zenodo.RDS - Pavia validation cohort.

 

RDS files containing DEGs or differentially abundant surface markers:

TestResults2Groups.rds - Cell type specific LTR vs Non Responder DEG 

TestResults2GroupsADT.rds - Cell type specific LTR vs Non Responder differential surface markers

TestResults2GroupsLungOnly.rds - Cell type specific LTR vs Non Responder DEG on lung samples only

TestResults2GroupsLungOnlyADT.rds - Cell type specific LTR vs Non Responder differential surface markers on lung samples only

TestResults3Groups.rds - Cell type specific LTR vs R vs Non Responder differential DEG

TestResults3GroupsGeneralADT.rds - Across cell type LTR vs R vs Non Responder differential surface markers

TestResults2GroupsGeneralRNA.rds - Across cell type LTR vs Non Responder DEG 

TestResults2GroupsGeneralADT.rds - Across cell type LTR vs Non Responder differential surface markers

TestResults2GroupsLungOnlyGeneralRNA.rds - Across cell type LTR vs Non Responder DEG on lung samples only

TestResults2GroupsLungOnlyGeneralADT.rds - Across cell type LTR vs Non Responder differential surface markers on lung samples only

TestResults3GroupsGeneralRNA.rds - Across cell type LTR vs R vs Non Responder differential DEG

TestResults3GroupsGeneralADT.rds - Across cell type LTR vs R vs Non Responder differential surface markers

 

Logistic regression models trained on the NCCS discovery cohort:

PerCellPredictions <CellType> * - Celltype specific models predicting either LTR, R or control group trained on all NCCS samples

PerCellPredictions_2Groups_LungOnly <CellType> * - Celltype specific models predicting either LTR or NonResponder group, trained on lung samples only.

PerCellPredictions_2Groups_<CellType> * - Celltype specific models predicting either LTR or NonResponder trained on all NCCS samples
DOI: 10.5281/zenodo.14201532
title: The Roles of Shallow Convection and Cloud Radiative Feedback in Convectively-Coupled Kelvin Wave: MPAS-aquaplanet Model configuration

description: We provide the model configuration for the MPAS-A aquaplanet used in our journal article titled “The Roles of Shallow Convection and Cloud Radiative Feedback in Convectively-Coupled Kelvin Waves” by Hsu et al., submitted to the Journal of Climate in 2024.
DOI: 10.5281/zenodo.14201531
title: The Roles of Shallow Convection and Cloud Radiative Feedback in Convectively-Coupled Kelvin Wave: MPAS-aquaplanet Model configuration

description: We provide the model configuration for the MPAS-A aquaplanet used in our journal article titled “The Roles of Shallow Convection and Cloud Radiative Feedback in Convectively-Coupled Kelvin Waves” by Hsu et al., submitted to the Journal of Climate in 2024.
DOI: 10.15468/dl.auv5sg
title: Occurrence Download

description: A dataset containing 2389672391 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Animalia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2389672391 records from 43924 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027165-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eojbce
title: Occurrence Download

description: A dataset containing 19156 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lynx rufus (Schreber, 1777)"
 ]
}

 The dataset includes 19156 records from 145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013025-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2vnx8p
title: Occurrence Download

description: A dataset containing 4572 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Terminalia catappa L."
 ]
}

 The dataset includes 4572 records from 237 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016983-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqesjw
title: Occurrence Download

description: A dataset listing the 2 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heliconia rostrata Ruiz & Pav."
 ]
}

 The dataset's 2 records were derived from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069557-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qb1tsh
title: Occurrence Download

description: A dataset containing 20208 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Euphorbia lathyris L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 20208 records from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013025-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6obzyy
title: Occurrence Download

description: A dataset containing 12951 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2000-2018",
 "TaxonKey is Procyon lotor (Linnaeus, 1758)"
 ]
}

 The dataset includes 12951 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016961-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dyb3ru
title: Occurrence Download

description: A dataset containing 789283 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "PublishingCountry is Singapore"
 ]
}

 The dataset includes 789283 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197685-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ptggkw
title: Occurrence Download

description: A dataset containing 2707377 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Culicidae"
 ]
}

 The dataset includes 2707377 records from 1007 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058928-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8gdjz9
title: Occurrence Download

description: A dataset containing 3772 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leiognathus equulus (Forsskål, 1775)"
 ]
}

 The dataset includes 3772 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052029-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gn7jbm
title: Occurrence Download

description: A dataset containing 856 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidotrigla alata (Houttuyn, 1782)"
 ]
}

 The dataset includes 856 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052033-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s24asx
title: Occurrence Download

description: A dataset containing 17285 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "Country is one of (China, Hong Kong, Macao, Chinese Taipei)",
 "TaxonKey is Xenus cinereus (Güldenstädt, 1775)"
 ]
}

 The dataset includes 17285 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009670-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.