cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/r2bj3nm82f
title: Microarray data for identification of a circulating carbohydrate antigen as highly specific and sensitive target for schistosomiasis serology

description: This dataset consist the raw data, extracted results, and processed data which led to identification of circulating anoidic antigen (CAA) as a highly specific and sensitive target for future development of a schistosomiasis antibody-detection tool.

Please, use the "read-me" file to navigate the contents. The "SLIDES" folder contain raw data in the form of microarray scan images organised per array print and the extracted result files. The "Microarray data included in paper" contains all processed microarray data used in the Kildemoes et al. "Identification of a circulating carbohydrate antigen as highly specific and sensitive target for schistosomiasis serology" preprint version found on doi.org/10.1101/2023.03.07.23286891 (link can be found on bottom of page).
DOI: 10.6084/m9.figshare.3555567.v1
title: Appendix A. Detailed description of the experimental procedure and methods for analyzing the phase lags.

description: Detailed description of the experimental procedure and methods for analyzing the phase lags.
DOI: 10.6084/m9.figshare.7949465.v1
title: gVCF_NA20885

description: 1000 Genomes gVCF mapped to hs37d5 for NA20885. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/pt3kzzw8b9
title: Supplementary Table I

description: Characteristics of all dermatology applicants (2017-2022) within STAR database.
DOI: 10.17632/syn7hgkjck
title: SURVEY ON PERCEIVED SAFETY AND EFFICACY, KNOWLEDGE AND COMPLEXITY OF INFORMATION REGARDING HERBAL CURES/DRUGS TO CONTROL OR CURE COVID-19

description: The data evaluated the level of knowledge of effects, knowledge of safe use and information complexity that influence Consumers' perceived safety and efficacy toward natural health products used to control or cure Covid-19 viruses in Malaysia.
DOI: 10.6084/m9.figshare.14701479.v1
title: Original data

description: Data for Weather Observations Website (https://wow.knmi.nl/) for the weatherstation AMSIJ, Den Ilp, Amstelveen & Osdorp. And the data for Schiphol from the KNMI (https://www.knmi.nl/nederland-nu/klimatologie/daggegevens).
DOI: 10.6084/m9.figshare.19310711.v2
title: RawData

description: Raw images and microscope metadata from MERFISH mouse liver and kidney data.
DOI: 10.6084/m9.figshare.19666074.v1
title: Data and animations for manuscript by Wolf et al. (2022) published in JGR Solid Earth, entitled:"Evolution of rift architecture and fault linkage during continental rifting: Investigating the effects of tectonics and surface processes using lithosphere-scale 3D coupled numerical models"

description: These animations provide the data for the analyses and figures of the main manuscript. Data is available for the five main models (Model M1 - M5) and the seven supplementary models (Models SM1 - SM7). In each animation the evolution of the model output over the model duration (i.e., 25 Myr) is displayed. In the four panels of each animation, we show: strain rate on top of hillshade (top, left panel) FastScape topography and sediment thickness (top, right panel) Accumulated plastic strain (Bottom, left panel) Material colors from thermo-mechanical model (Bottom, right panel) We refer to Table 3 of the main manuscript for model parameters. The original model output is available upon request.
DOI: 10.6084/m9.figshare.2008995.v1
title: PowerPoint Presentation and Excel Graphs Used in Twinery

description: Final PowerPoint presentation and excel graphs used in Twinery model
DOI: 10.6084/m9.figshare.20964304.v1
title: Supplementary Material for: A Pilot Study Examining the Effects of Ischemic Conditioning on Walking Capacity and Lower Extremity Muscle Performance in Patients with Claudication

description: <b><i>Introduction:</i></b> This study investigated whether a novel therapy called ischemic conditioning (IC) improves walking capacity and lower extremity muscle performance in patients with peripheral vascular disease who experience intermittent claudication. <b><i>Methods:</i></b> Forty-three patients with claudication were enrolled and received either IC or IC Sham for 2 weeks in this randomized, controlled, double-blinded, prospective study. IC sessions involved five cycles of alternating 5-min inflations of a blood pressure cuff to 225 mm Hg (25 mm Hg for IC Sham) and 5-min deflations, around the thigh of the affected lower extremity. <b><i>Results:</i></b> There was no difference in the change in claudication onset time (Δ = 114 ± 212 s IC vs. 104 ± 173 s IC Sham; <i>p</i> = 0.67) or peak walking time (Δ = 42 ± 139 s IC vs. 12 ± 148 s IC Sham; <i>p</i> = 0.35) between the IC and IC Sham groups. At the level of the knee, participants in the IC group performed more work (Δ = 3,029 ± 4,999 J IC vs. 345 ± 2,863 J IC Sham; <i>p</i> = 0.03) and displayed a greater time to muscle fatigue (Δ = 147 ± 221 s IC vs. −27 ± 236 s IC Sham; <i>p</i> = 0.01). <b><i>Discussion/Conclusion:</i></b> In patients with claudication, IC improved total work performed and time to fatigue at the knee but did not change walking parameters.
DOI: 10.6084/m9.figshare.3250534.v2
title: The number of UNESCO World Heritage sites by country and national statistics

description: Dataset with the number of UNESCO World Heritage sites across countries and nation variables: GDP, population and area.
DOI: 10.6084/m9.figshare.4758646.v1
title: OnlineAppendix_Vizentin-Bugoni et al 2017

description: Metadata extracted from 206 studies published on pollination networks in tropical and non-tropical regions. Details on Vizentin-Bugoni J, Maruyama PK, Silveira CS, Ollerton J, Rech AR & Sazima, M (2017). Plant-pollinator interactions in the tropics: a review. In. Dáttilo W & Rico-Gray V. Ecological Networks in the Tropics. Springer.
DOI: 10.6084/m9.figshare.5220586.v1
title: Paracetamol versus ibuprofen for the treatment of patent ductus arteriosus in preterm neonates: a meta-analysis of randomized controlled trials

description: <b>Background:</b> Paracetamol has been suggested as an effective treatment for patent ductus arteriosus (PDA). However, the comparative efficacy and safety between paracetamol and ibuprofen were not determined. <b>Methods:</b> A meta-analysis of randomized controlled trials (RCTs) was performed. Relevant studies were identified via database searching. A fixed or random effect model was applied depending on the extent of heterogeneity. <b>Results:</b> Five RCTs with 677 neonates were included. The efficacies for the primary (risk ratio [RR]: 1.03, <i>p</i> = .56) and overall PDA closure were comparable between the two medications (RR: 1.02, <i>p</i> = .62). Neonates of the two groups were comparable for the incidence of PDA complications, including necrotizing enterocolitis (RR: 0.86, <i>p</i> = .70), intraventricular hemorrhage (RR: 0.84, <i>p</i> = .55), bronchopulmonary dysplasia (RR: 0.69, <i>p</i> = .16), and retinopathy of prematurity (RR: 0.58, <i>p</i> = .15), and the risks of sepsis (RR = 0.88, <i>p</i> = .48) and death (RR: 1.45, <i>p</i> = .45) within hospitalization. However, treatment with paracetamol was associated with a trend of reduced risk of renal failure (RR: 0.20, <i>p</i> = .07), and a significantly reduced risk of gastrointestinal bleeding (RR: 0.28, <i>p</i> = .009). <b>Conclusions:</b> Paracetamol may confer comparable treatment efficacy for the closure of PDA as ibuprofen, although paracetamol is associated with lower risk of adverse events.
DOI: 10.17632/3vzkhnwh38
title: Dataset_The effect of specific locomotor experiences on infants avoidance behaviour on real and water cliffs (2020)

description: The present study examined crawling and walking infants’ avoidance and exploratory behaviour on the Real Cliff / Water Cliff (RC/WC) apparatus. The RC/WC apparatus consists of a 200 x 120 x 75cm platform with a real cliff at one end and a water cliff at the opposite end. Climbing equipment was used to ensure infant’s safety. The main aim of this study was to investigate the impact of specific locomotor experiences on infants’ avoidance of falling on the real and the water cliffs and to compare infants’ avoidance and exploratory behaviours on the real and the water cliffs. Infants were tested once on the real cliff and once on the water cliff, with trial order counterbalanced. The experimenter placed the infants close to the opposite edge of the platform. After the trial was initiated, the experimenter would only interfere with the infants’ movements if they did not move from the starting position during the first minute, in which case the experimenter would place them near the platform edge. The trials ended: (a) after 180s, if the infant had moved from the starting position but had not reached the platform edge; (b) 150s after the infant reached the platform edge; (c) when the infant fell off or descended from the platform edge; (d) when the infant started showing signs of distress or fussiness. If the infant showed signs of distress or fussiness during the first 60s of the trial and was not able to be calmed down, the test was ended and the infant was excluded from subsequent analyses. If the infant showed signs of distress or fussiness after 60s of reaching the edge, the test was ended, and the infant was coded as an avoider. Infants were free to move around and explore the platform while their mothers were calling them. Infants were code for: Avoidance behaviour: Infants who fell from the platform were coded as “fell”. Infants who stayed on the platform until the end of the trial were coded as “avoided” and infants who adapted their behaviour by turning around, laying their bellies on the platform and safely descending feet first, were coded “descended”; Approaching time: starting from the moment the infants were placed in the starting position and ending when they reached the edge of the cliff; Latency time: from the moment the infant reached the platform edge until the end of the trial; Tactile exploration time: accumulated duration of periods in which infants’ hands or feet went below the line of the platform, touching the water or reaching down towards the floor, until the moment they touched any other surface (apparatus or own body); Posture of exploration: accumulated duration of periods in which infants assumed a sitting, lying prone, crawling, squatting or upright posture; Pre-Fall posture: posture adopted at the moment the infants fell or locomoted over the platform edge; Retreat behaviour: if after getting to the platform edge infants moved away from it at least once.
DOI: 10.6084/m9.figshare.24494752.v1
title: Elisa TNF-alpha,MDA,SOD and GPx

description: Concentration of TNF-α, MDA, SOD and GPx in diabetic induced rat with zinc oxide nanoparticle emulsion from <i>Tithonia diversifolia </i>leaf extract
DOI: 10.6084/m9.figshare.29038550.v2
title: Photodissociation Dynamics of XH+ (X = Na, K, Rb, Cs): Rovibrationally Resolved Shape Resonances Driven by Potential Barriers in the Ultraviolet Spectrum

description: The adiabatic PECs of XH+ (X = Na, K, Rb, Cs)The total photodissociation cross sections of NaH+, KH+, RbH+ and CsH+ at thermodynamic temperatures of 0 K, 500 K, 1000 K, 5000 K and 10000 K, respectively.<br>
DOI: 10.15468/dl.gaf6ub
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sagamichthys schnakenbecki (Krefft, 1953)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((-1.9734 4.2478,-0.0352 5.0957,-0.0352 10.8496,-9.0352 10.8496,-9.0352 4.4397,-8.4168 4.1049,-7.389 3.8664,-5.7288 4.5489,-4.0108 4.7359,-1.9734 4.2478))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013218-250525065834625/datasets/export for details.
DOI: 10.17632/cn55pcbsz5
title: Bond TRS Excel Workbook

description: Bond TRS Excel Workbook
DOI: 10.6084/m9.figshare.17162885.v1
title: Additional file 2 of Genome-wide association of single nucleotide polymorphism loci and candidate genes for frogeye leaf spot (Cercospora sojina) resistance in soybean

description: Additional file 2: Table S1. Phenotypic evaluation of 234 soybean accessions
DOI: 10.6084/m9.figshare.27861054.v1
title: '<b>Self-potential signal associated with raining impact on hydrothermal system dynamics; the case study of Formica Leo, Piton de la Fournaise, La Réunion island.</b>

description: The file is the dataset for the manuscript entitled '<b>Self-potential signal associated with raining impact on hydrothermal system dynamics; the case study of Formica Leo, Piton de la Fournaise, La Réunion island.</b>' by Roulleat et al., including Self-potential and raiwater data shown in the manuscript.
DOI: 10.6084/m9.figshare.29155292.v1
title: Distribution de la statistique minimale.pdf

description: Cette feuille contient la démarche pour costruire la densité de la statisqtique d'ordre minimale X(1) dans un échantillon de taille N
DOI: 10.6084/m9.figshare.3543851.v1
title: Appendix E. Linear discriminant analysis of fungi, bacteria, and plants using 13C variations among the three most informative amino acids.

description: Linear discriminant analysis of fungi, bacteria, and plants using 13C variations among the three most informative amino acids.
DOI: 10.6084/m9.figshare.4892099.v2
title: State of Open Data Poster

description: Last year, Figshare released the results of its global survey of 2,000 researchers in a report that assesses the global landscape around open data and sharing practices. The report highlights the extent of awareness around open data, the incentives around its use, and perspectives researchers have about making their own research data open.<br><br><br>This poster will cover some of the highlights of the report including:<br><br><br>For the majority of respondents, open data is already a reality: Approximately three quarters of respondents have made their research data openly available at some point; a similar number are aware of data sets that are open to access, reuse, repurpose and redistribute.Researchers place value on the credit they receive for making data open:Nearly 70% of researchers value a data citation as much as an article citation. A further 10% value a data citation more than an article citation.Awareness of open data transcends age and career progression:Encouragingly, Principal Investigators (PIs) and Professors consistently responded similarly to PhD students and Post-doctoral fellows in their awareness of open data usage.Respondents admit to uncertainty and gaps in their knowledge and are hungry for more information, perhaps one set of critical factors that hold back progression in open data sharing.Researchers are uncertain of how to cite datasetsResearchers who have never made data openly available are considering doing so.Copies of the report will be available at the poster and all underlying data is openly available on figshare.<br>
DOI: 10.17632/42rxm392zb
title: Frontiers-Machine Learning

description: Dataset used for KNN for Frontiers Manuscript to diagnose BRD
DOI: 10.25405/data.ncl.13366574.v1
title: Simultaneous recordings from rhesus macaque V1 and V4 during a selective attention task

description: Simultaneous laminar recordings (16-contact silicon probes) in macaque V1 and V4 during a selective attention task.
DOI: 10.6084/m9.figshare.19441016.v1
title: GIS shape file of annual average water table depth - CONUS

description: GIS shape file of annual average water table depth - CONUS
DOI: 10.6084/m9.figshare.26134030.v1
title: <b>Atom-</b><b>p</b><b>air </b><b>e</b><b>ngineering of </b><b>s</b><b>ingle-</b><b>a</b><b>tom </b><b>n</b><b>anozyme </b><b>for </b><b>b</b><b>oosting </b><b>p</b><b>eroxidase-like </b><b>a</b><b>ctivity</b>

description: The raw data of the Manuscript “Atom-pair engineering of single-atom nanozyme for boosting peroxidase-like activity”.
DOI: 10.6084/m9.figshare.27916974.v1
title: qPCR data.xlsx

description: qPCR data
DOI: 10.6084/m9.figshare.3830295.v1
title: Land uses on Borneo

description: This file contains spatial data of the change in land use configurations on Borneo for 1997-2002, 2003-2008, and 2009-2014. Land use types include: protected areas (strict protected area and watershed protected forest) (PA), logging concessions on natural forest (LOGG), timber plantation concessions (ITP), oil palm concessions (OPP), urban area and infrastructure (INF), and area outside PA and INF and without concessions (OTHER).
DOI: 10.17632/d6p35z4bm2
title: Data and code NTS pathway in Accumulibacter

description: Here we make available all the data, input files, scripts, and functions required to reproduce our analyses regarding the glycolytic pathways available in Candidatus Accumulibacter. Additionally, the same data and files can be freely downloaded at https://github.com/kolavarria/NTS_pathway. Instructions for the creation of a Python environment suitable for reproducing our analyses are included.
DOI: 10.6084/m9.figshare.14502210.v1
title: GLMMs

description: .csv data file and .Rmd R notebook file for analysis of stool SCFA concentrations by generalized linear mixed models.
DOI: 10.6084/m9.figshare.14558709.v1
title: Gene database of Methanosarcina acetivorans C2A

description: Known to produce methane, <i>Methanosarcina acetivorans</i> C2A is an archaea commonly found in deep-sea hydrothermal vents, and trash dumps. Although unicellular, cells of <i>M. acetivorans</i> could form multicellular clumps and exhibit cellular differentiation. This work sought to provide fundamental information about the genetic repertoire of <i>M. acetivorans</i> by parsing its annotated genome sequence downloaded from GenBank. Comprising gene name, gene function, and gene sequence, the resource should be useful for neophytes in the field of archaea microbiology to gain initial understanding of the genetic endowment and metabolic capabilities of this relatively less-studied microorganism.
DOI: 10.6084/m9.figshare.19946063.v1
title: GPS-OBSERVABLES-NAVIGATION-DATA

description: he test consisted of equipping a radio-controlled rover with a low-cost u-blox C102-F9R application board connected to a u-blox multi-band/multi-constellation antenna, model ANN-MB-01. The antenna was attached to the roof of the rover. The data acquisition was conducted in an experimental coffee plantation composed of young coffee trees with a height of about 1.5 m, located at the Federal University of Lavras (UFLA). The rover was guided through the corridors of the coffee plantation, which are approximately 130 m long, collecting and saving, in a personal computer, GPS raw data with interval tracking of 1 second. The GPS data was collected in .ubx format and converted to RINEX.
DOI: 10.6084/m9.figshare.20128256.v1
title: Data.rar

description: Figure data of article
DOI: 10.6084/m9.figshare.24503815.v1
title: FMGC Eukaryotic bins and viral contigs

description: <i>The detection of eukaryotic genomes involved an initial filtration step using EukRep v0.6.772 to selectively retain bins containing substantial amounts of eukaryotic DNA. Bins with more than 1 Mbp of eukaryotic bases were considered as potential eukaryotic bins. Next, Busco v5.5.0 was used to estimate bin completeness and contamination. We obtained a total of 35 putative eukaryotic bins with very low completeness, ranging from 1% to 50%, suggesting no useful eukaryotic genomes could be identified in our dataset. Notably, only 2 bins reached 50% completeness (50.6% and 54.5%).</i><i>Additionally, VirSorter2 (--min-score 0.7) was used to identify viral contigs. Contigs with VirSorter2 score over 0.7 were considered as viral contigs. As short contigs may only represent fragments of viral genomes, contigs that were longer than 5 kb were kept for further analysis. The kept dataset was dereplicated using CD-HIT (v4.8.1, parameters: -c 0.95 -n 8) using a global identity threshold of 95%. We obtained a total of 21,777 non-redundant viral contigs. The completeness and contamination were estimate with CheckV. In total, 2,417 (9.86%) and 165 (0.76%) viral contigs were considered complete or high-quality (&gt;90% completeness).</i>
DOI: 10.6084/m9.figshare.25295140.v1
title: Supplementary Table S1 from Using ancient sedimentary DNA to forecast ecosystem trajectories under climate change

description: List of lakes where sedaDNA metabarcoding has been analyses for mammals and/or vascular plant. The data is based on Von Eggers et al. 2022 but limited to original metabarcoding studies of lake sediments and updated with relevant papers from the sedaDNA society track list (https://sedadna.github.io/ October 2023) and unpublished study sites from our own research groups.
DOI: 10.17632/jwhgkz4b6d
title: Asian Dust and Sedimentary Dynamics Drive Western Pacific Rare Earth Elements Enrichment

description: Tables S1–S5: major element contents; Sr–Nd–Pb–Hf isotopic compositions; K isotopic compositions; clay mineral compositions; Sr–Nd–Pb–Hf isotopic and trace element compositions of the mixing end-members.
DOI: 10.6084/m9.figshare.12830579.v1
title: Apocynaceae_all_bait_sequences.txt

description: Targeted sequencing probes for solution hybridization to enrich for single copy nuclear genes in Apocynaceae. This file also contains probes for <i>dhs </i>and <i>hss.</i>
DOI: 10.6084/m9.figshare.21215231.v1
title: Interactions between Fermi polarons in monolayer WS2: MDCS Data

description: This is the data underlying the 2D spectra presented in Nature Communications <strong>13</strong>, Article number: 6164 (2022). Each sheet corresponds to the relevant figure, as indicated
DOI: 10.6084/m9.figshare.21700955.v3
title: Leaf age-dependent LAI seasonality product (Lad-LAI) over tropical and subtropical evergreen broadleaved forests

description: This dataset provides 0.25 degree spatial resolution leaf age-dependent LAI seasonality product (Lad-LAI) (2001-2018) over tropical and subtropical evergreen broadleaved forests (TEFs). The mapped extent is longitude (-180, 180) and latitude (-30, 30). (1) Methodology and performance The canopy leaves of TEFs were simplified into three age cohorts, i.e., young, mature and old one, with different photosynthesis capacity (maximum carboxylation rate, V<sub>cmax</sub>) to produce a grid dataset of leaf age-dependent LAI product (referred to as Lad-LAI) over the continental scale from satellite observations of TROPOMI sun-induced chlorophyll fluorescence (SIF) as a proxy of leaf photosynthesis. Validations against in situ measurements of seasonal LAI data, satellite based EVI and in situ measurements of seasonal litterfall data demonstrated the products were in high accuracy. (2) Dataset information The seasonality dataset is provided in geotif (*.tif) format with pixel values of 0-6 for LAI<sub>young</sub>, LAI<sub>mature</sub> and LAI<sub>old</sub>. Data named "LAI_young_025deg_1.tif" means leaf area index of young leaves mapped in January. The timeseries dataset is provided in geotif (*.tif) format with pixel values of 0-6 for LAI<sub>young</sub>, LAI<sub>mature</sub> and LAI<sub>old</sub>. Data named "LAI_young_025deg_200101.tif" means leaf area index of young leaves mapped in January 2001. The quality control (QC) dataset is provided in geotif (*.tif) format with pixel values of 1-4 for LAIs. In the QC system, data quality is divided into four levels: level 1 (QC=1) represents the highest quality; level 2 (QC=2) and level 3 (QC=3) represent good and acceptable quality, respectively; and level 4 (QC=4) warns to be used cautiously. Data named "QC_LAI_025deg_1.tif" means the quality control of leaf area index of young leaves mapped in January. The other two versions datasets are Lad-LAI generated from GOSIF-derived GPP and Lad-LAI generated from FLUXCOM GPP. <br> <br> Any questions about the dataset can be corresponded to Xiuzhi Chen (chenxzh73@mail.sysu.edu.cn).