cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.6z8c3x
title: Occurrence Download

description: A dataset containing 14804133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Cardinalis cardinalis",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 14804133 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064620-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z54tnr
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tisbe clodiensis Battaglia & Fava, 1968"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0133731-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-45984
title: Redemption tidings, vol. 16, nos. 1-26, 1 Jan. - 13 Dec. 1940

description: [description english/roman)] Issued fortnightly (every two weeks). "A full gospel magazine for all believers" -- subtitle. Includes Tidings from our missionaries in each issue (1 Jan. - 13 Dec. 1940).
DOI: 10.15468/dl.zyy97g
title: Occurrence Download

description: A dataset containing 493132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apis mellifera Linnaeus, 1758",
 "Year 1960-2022"
 ]
}

 The dataset includes 493132 records from 831 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254360-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15454/n4owhf
title: Datasets Sensory detection by the vomeronasal organ modulates experience-dependent social behaviors in female mice

description: Datasets of the publication "Sensory detection by the vomeronasal organ modulates experience-dependent social behaviors in female mice" generated for figures 1-4 and table 1.
DOI: 10.15454/qqdalg
title: Article Data - Assessment of Grenache Maturity Evolution in a Mediterranean context over the last half century

description: Article Data : Assessment of grenache maturity evolution in a Mediterranean context over the last half-century
DOI: 10.15454/qwrjhl
title: Iron supplementation in organic pig farming

description: This file contains information about the pliglets that were used for the measures (farm number, piglet ID, sex, mother ID, liveweight at sampling, date of birth, date of weaning, date of sampling,littersize of the litter it belongs to, parity of the mother and the results of measures in blood, serum of plasma
DOI: 10.15454/stoj93
title: Widespread latitudinal asymmetry in marginal population performance

description: Raw data for the paper "Widespread latitudinal asymmetry in marginal population performance"
DOI: 10.15454/rmzx3m
title: Data described in the paper titled 'Effect of moderate forced physical activity on behaviour, lameness and osteochondrosis in growing pigs from two divergent lines selected for feed efficiency'

description: This data set contained the dat used for statistical analyses described in the paper and row data for figures 1 to 4.
DOI: 10.15454/rpucxs
title: RPG complété 2018 département 89

description: RPG complété 2018. Complète le RPG campagne 2018 pour le département 89. (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2020.
DOI: 10.15454/uq4mob
title: Experimental data associated with itineraries to produce composites from vineshoot fibers and PHBV.

description: This dataset contains data about several itineraries to produce composites from vineshoot fibers and PHBV.
DOI: 10.15454/v91ss2
title: O2 and CO2 permeability of self-assembled stratified polyethylene-organoclay films for food packaging applications - O2 and CO2 permeability values of hybrid multilayer-coated PE films

description: value unavailable
DOI: 10.15454/qum1lq
title: Histology of L4 aphid head-stylets

description: Aphids were fixed overnight in 4% paraformaldehyde (PFA)-PBS solution at 4°C. After fixation, the samples were washed 3 times for 10 min each in phosphate buffered saline (PBS). The aphids were then transferred into aqueous 35% H2O2 for one week until the cuticle turned light-yellow. After washing again 3 times for 10 min each in PBS, the samples were incubated in graded ethanol solutions (50%, 70%, 90%, 95% and 100%; 10 min each). The samples were finally transferred to methyl salicylate (M6752, Sigma-Aldrich) for clearing. .tif stacks are opened with any bitmap image processing software (ImageJ). .ims file is open data file format (Bitplane Inc), and may be treated with Imaris (5.x File Format) or converted with ImarisFileConverter. Both accessible at biplane.com or https://imaris.oxinst.com/packages.
DOI: 10.15454/rwhief
title: Omnicrobe

description: The Omnicrobe database gathers comprehensive information on habitats, phenotypes and usages of microorganisms as automatically extracted from text sources (PubMed, GenBank, DSMZ, CIRM-BIA, CIRM-CFBP, CIRM-Levures). The search offers you access to the information and their sources.
DOI: 10.15454/nwqdes
title: Water temperature on the Varenne river (Seine-Maritime county - France)

description: The data consists of Varenne river water temperature since 1999 collected for the Environmental Research Observatory (ORE) on Diadromous Fish in Coastal rivers (DiaPFC). ORE DiaPFC is a research infrastructure focused on studying the influence of human-induced and environmental changes (mainly agriculture and climate). The River Varenne is a tributary of the Arques river. It is 39,9 km long and has a mean slope of 0,32%. It drains a basin of 360 km2 and flows north-west from Saint-Martin-Osmonville and ends into the Arques river at Arques-La-Bataille. The mean flow is 3,5 m3/s.
DOI: 10.15454/rkyclf
title: Time evolution of nitrate, nitrite and dissolved organic carbon concentrations of the water collected by EFELE's lysimeters

description: This dataset is related to the time evolution of nitrate, nitrite and dissolved organic carbon concentrations of the water collected by EFELE’s lysimeters during drainage seasons from 2014-2015 to 2017-2018. EFELE is an experimental site of the SOERE PRO network (https://www6.inra.fr/valor-pro). It is used to measure long-term evolutions of agrosystems after repeated applications of organic residues derived from animal wastes that undergo a variety of treatments (e.g. none, composting, anaerobic digestion). Two long-term agronomic experiments have been performed at the EFELE site since 2012: i) PROs, a randomized 4-block trial: 5 OWP treatments are compared to a control treatment with mineral nitrogen (N) fertilization (MIN). The OWP treatments studied are pig slurry (PS), composted pig manure supplemented with mineral N (CPigM+N), cattle manure supplemented with mineral N (CM+N), poultry manure (PoM) and a digestate of pig slurry (PS-DIG), ii) TS/MO, a split-plot trial with 4 treatments: conventional tillage and mineral N fertilization (CT_MIN), conventional tillage and cattle manure application (CT_CM), reduced tillage and mineral N fertilization (RT_MIN) and reduced tillage and cattle manure application (RT_CM). Six plots of the PROs trial (block 1) and 4 plots of the TS/MO trial (block 1) are equipped with fiberglass-wick lysimeters. Two pairs of lysimeters are installed in each plot (depths of 40 and 90 cm, respectively). Data from 4 consecutive drainage seasons from 2014-2015 to 2017-2018 are presented in this dataset
DOI: 10.5281/zenodo.15620889
title: ARTISTIC FUNCTION OF COLOR IN PROSE (ON THE EXAMPLE OF O. HENRY'S STORY "THE GREEN DOOR")
DOI: 10.5281/zenodo.15620890
title: ARTISTIC FUNCTION OF COLOR IN PROSE (ON THE EXAMPLE OF O. HENRY'S STORY "THE GREEN DOOR")
DOI: 10.15454/snn1lb
title: Experimental raw data associated to the publication entitled "Dynamic interspecies interactions and robustness in a four-species model biofilm"

description: Experimental raw data associated to "Baliarda A., Winkler M., Tournier L., Tinsley C. and Aymerich S. Dynamic interspecies interactions and robustness in a four-species model biofilm", to be published in MicrobiologyOpen
DOI: 10.15454/vln8uc
title: Genes differentially expressed across four life stages in M. incognita and GO enrichments

description: Meloidogyne incognita protein-coding genes differentially expressed at four stages during the parasitic life cycle: - eggs - pre-parasitic second stage juvenile (J2) - mix of parasitic second, third and fourth stage juveniles (J3) - adult females The genes show significantly differential expression between the stages according to three methods EBseq + EdgeR + DEseq2. The following thresholds were used to consider differential expression as significant: - Log2 fold change &gt;2 - false discovery rate (fdr) 0.05 The six first files correspond to the six comparisons between the four developmental life stages as follows: eggs--(1)--&gt;J2--(2)--&gt;J3--(3)--&gt;female--(4)--&gt;eggs With the two remaining comparisons being: J2--(5)--&gt;female eggs--(6)--&gt;J3 Each of these files are in tab-separated values format (tsv) and present expression values and statistics of DEseq2, EdgeR and EBseq (from Rsem). A seventh file in XLSX Excel format groups all the above information and adds some statistics on genes known to be specifically expressed in dorsal gland (DG) or subventral gland (SvG) cells. Finally, the last files provide a graphical representation of the genes differentially expressed during the M. incognita developmental life cycle as well the gene ontology (GO) 'Molecular Function' terms overrepresented at the different transitions.
DOI: 10.15454/vp7pri
title: Processing and Grain-Legumes WoS DataSet 1980-2018

description: The text file corresponds to the search query capturing the main processing research theme on grain-legumes (both soya and pulses, see Species Grain-Legumes WoS dataset) to be applied on the WoS (Web of Knowledge). This search query is restricted to the main types of scientific literature documents, namely the types: article, book, book chapter, and review. This translated into the query DT = ("Article" OR "Book" OR "Book Chapter" OR "Review"); the time range selected is 1980-2018 (PY = "1980-2018"). Processing theme refers to the transformation and main types of food products excluding non-food uses. UT file corresponds to the results of this search query (UT refers to a WoS unique identifier for each record retrieved) after a post-processing step which eliminated the records captured by the Wos KeyWord Plus : ie, the UT file correspond to records containing terms of the search query only in title, abstract, and (regular) keywords. See the related publication for more information.
DOI: 10.15454/ucyslh
title: 5 years study on Collembola communities in various land uses (2009-2013) in Meuse

description: This dataset is composed by an excel files with 4 sheets: (i) 3 "abundance" sheets are data tables that groups the collembolan communities in sampled sites (minimum of 3 replicates by site) divided in function of land use types (grassland, forest, cultivated land) , (ii) "trait" provides information on the functional traits of several collembolan species. These data are largely extracted from the BETSI trait database (https://portail.betsi.cnrs.fr/)
DOI: 10.15454/trfs3h
title: 76 highly validated SNP markers for Juniperus thurifera

description: 76 highly validated SNP markers for Juniperus thurifera developped from ddRAD-Seq data following Garcia et al., 2018, except the SNP detection which was performed using discoSnp++ (http://colibread.inria.fr/software/discosnp/). PCR primer sequences and single base extension primers for MassArray analysis are provided.
DOI: 10.15454/tyqdgp
title: Medicago truncatula SNP temporal data from: "Power and limits of selection genome scans on temporal data from a selfing population"

description: SNP data from a population located in Cape Corsica (42°58.406’ North, 9°22,015’ East, 362 m.a.s.l.), collected in 1987 (64 plants) and 2009 (96 plants).Genotyping was performed using two SNP chips specifically developed for M. truncatula (Loridon et al. 2013 Molecular Ecology Resources). Out of the 1920 SNPs, 137 were located in genes encoding flowering time, 721 in other candidate genes, in particular genes involved in symbiosis and 1062 at random positions of the genome.
DOI: 10.15454/vgvcij
title: Test dataset for assessment FROGS 16S amplicon methodology

description: Grinder (v.0.5.3) (Angly, et al., 2012) was used to simulate the PCR amplification of fulllength (V3V4 and V4) sequences from reference databases. We generated 25 sets of species manually extracted from UTAX (Simulated Data From UTAX = SDFU) and 25 others from SILVA (v123) databank (Quast, et al., 2013) (Simulated Data From SILVA = SDFS) (Figure1 of main text and companion website: tab SDFU/Datasets and SDFS/Datasets). We generated amplicons by (i) filtering out sequences with ambiguous nucleotides, (ii) keeping only bacterial species with non-ambiguous affiliation taxonomy and with pintail&gt;50 for sequences from SILVA (Ashelford, et al., 2005), and (iii) with a match (with 10% of mismatches allowed) for the forward (TACGGRAGGCAGCAG) and reverse (TAGGATTAGATACCCTGGTA) primers in the V3V4 region and for the forward (GTGCCAGCMGCCGCGGTAA) primer in the V4 region,and (iv) maximizing the phylogenetic diversity of the amplicons in the full length 16S phylogenetic tree. This results in 25 increasingly complex nested databases. Grinder requires both error and abundance profiles to generate sequences. We used the following error parameters: the error rate increases linearly from 0.301% to 0.303% per base along the read, 98.6% of errors are SNPs and 1.4% are indels. These parameters were calibrated by mapping reads from a single strain (D'Amore, et al., 2016; Schirmer, et al., 2016; Schirmer, et al., 2015) MiSeq sequencing run to its known sequence to mimic typical MiSeq error profiles and agree with other reported values. We used the default n-mer distribution: 89% of bimeras, 11% trimeras and 0.3% of quadrimera, corresponding to the average values published in Quince et al. 2011 (Quince, et al., 2011). The fraction of chimera increased with the reference database size to reflect increasing sequence similarities: 5% for 20 taxa, 10% for 100 and 200 taxa and 20% for 500 and 1000 taxa. Chimera breakpoints were distributed uniformly along the amplicon. We considered two different abundance profiles: uniform and power law. For a power law abundance profile, parameters were calibrated to set the expected max/min abundance ratio to 100 (20 taxa), 1000 (100 and 200 taxa) or 10000 (500 and 1000 taxa). For each combination of database sizes (20/100/200/500/1000), abundance profiles (uniform, power law), amplicon regions (V3V4/V4), we generated 5 communities with different compositions. We then simulated 10 samples of 100000 reads each from each community. Finally, we used cutadapt (v1.7.1) to trim primers from the generated reads. Trimmed sequences were not preprocessed with quality filters but instead used as such in downstream analyses.
DOI: 10.15454/yzjxet
title: Milling itineraries for a collection of crop byproducts - Itineraries description, product granulometric characterization and associated kinetics

description: This data set contains milling itineraries and granulometric properties of the resulting powders obtained from a collection of by-products from crops (flax fibres, hemp core, rice husk, wheat straw) representative of currently used lignocellulosic biomass. The data are gathered in four tables. Table 1 provides a precise description of milling itineraries associated with produced powder samples. Table 2 reports the granulometric characteristics of all produced powder samples. The kinetics of particle size reduction for a subset of produced powder samples are gathered in Table 3. In Table 1, a milling itinerary is described by a set of unit operations and associated with a unique numerical identifier (column Experience number). Each unit operation of a given itinerary is described on a separate line and associated with a unique numerical identifier (columns Experience number + Process step number). Numerical value associated with Process step number column indicates temporal order (e,g step 1 is before step 2). In case of parallel unit operations, a dot is used (e,g step 1.1 is parallel to step 1.2). The following information are reported: date; biomass nature and name (Biomass) ; processing operation type (Treatment); drying mode/moisture content (Treatment); biomass quantity; equipment name and type (Material); rotation speed; vibration frequency; mass of balls; sieving grid size (sieving size); treatment duration; temperature; output solid quantity (Output solid constituent quantity); output solid yield (Output solid constituent quantity), characterized sample product name (Sample Product1). In Table 2, are found the data concerning particles and powders characterization: characterized sample product name (Sample Product); biomass name and nature (Biomass); d50 calculation method; d50 in volume; d50 in number; d10 calculation method; d10 in volume; d10 in number; d90 calculation method; d90 in volume; d90 in number; span; specific surface area calculation method; specific surface area value. Table 3 has the same structure that Table 2 extended by an additional column (Sampling time) indicating the time at which a sample has been extracted during the milling for granulometric characterisation. Table 4 contains the whole set of full particle size distributions of all samples of Table 3. An additional file describres SOP (Standard Operating Procedure) parameter conditions used for granulometric characterization.
DOI: 10.15454/uvxkdj
title: Instructions for the building of the Sanane lepidoptera larvae feeding bioassay device

description: This Dataset contains the blueprints and the instructions to build-up a high-throughput device for Lepidoptera larvae feeding bioassays
DOI: 10.15468/dl.d5y2tn
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Machaerium uribei Rudd"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170720-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tm0md8
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Popelairia conversii (Bourcier & Mulsant, 1846)"
 ]
}

 The dataset includes 35 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005385-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfjws4
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Marila magnifica Linden & Planch."
 ]
}

 The dataset includes 15 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170719-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lz9xbw
title: Occurrence Download

description: A dataset containing 233224 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is MVZ Mammal Collection (Arctos)"
 ]
}

 The dataset includes 233224 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045735-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ez9epo
title: Occurrence Download

description: A dataset containing 3802 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carcharodon carcharias (Linnaeus, 1758)"
 ]
}

 The dataset includes 3802 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005385-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xc7h2n
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alpheus macroskeles Alcock & Anderson, 1899"
 ]
}

 The dataset includes 16 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048684-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xcb589
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Maxillaria leucaimata Barb.Rodr."
 ]
}

 The dataset includes 205 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0170721-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jst96a
title: Occurrence Download

description: A dataset containing 13083961 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cathartes aura (Linnaeus, 1758)"
 ]
}

 The dataset includes 13083961 records from 597 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005832-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djpcvl
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Peru",
 "Country is Chile"
 ]
 },
 "TaxonKey is Cryphiops caementarius (Molina, 1782)"
 ]
}

 The dataset includes 96 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005385-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evcsdi
title: Occurrence Download

description: A dataset containing 115365 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is TTU Mammals Collection"
 ]
}

 The dataset includes 115365 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045740-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7au92t
title: Occurrence Download

description: A dataset containing 6722 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Palicourea tomentosa (Aubl.) Borhidi"
 ]
}

 The dataset includes 6722 records from 208 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005816-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.