cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16892719.v1
title: March 2021 Covid-19 + Vaccines Twitter Streaming Dataset

description: The file contains Tweet IDs* for COVID-19 related tweets collected in <b>March, 2021</b> from <b>Twitter's COVID-19 Streaming Endpoint </b>via a custom script developed by the <b>Social Media Lab (https://socialmedialab.ca/)</b>.<br>Visit <b>our interactive dashboard at https://stream.covid19misinfo.org</b>/ for a preview and some general stats about this COVID-19 Twitter streaming dataset.<br>For more info about <b>Twitter's COVID-19 Streaming Endpoint</b>, visit <b>https://developer.twitter.com/en/docs/labs/covid19-stream/overview</b><br><b>Note</b>: In accordance with Twitter API Terms, the dataset only includes Tweet IDs (as opposed to the actual tweets and associated metadata). To recollect tweets contained in this dataset, you can use programs such as Hydrator (https://github.com/DocNow/hydrator/) or the Python library Twarc (https://github.com/DocNow/twarc/).
DOI: 10.6084/m9.figshare.25598436.v1
title: Agricultural Technology and Practices (ATP).csv

description: Technology Access to Agricultural Technology Practices (ATP): In this study, access to agricultural technology, input and practices considered the basic dimension for attaining household resilience to food insecurity. For this end, this data type includes the directly observable data collected from respondent households.
DOI: 10.6084/m9.figshare.963169.v1
title: Rapid and selective determination of osmium(IV) by UV-visible spectrophotometry using <i>o</i>-methylphenyl thiourea as a chromogenic chelating ligand: sequential separation of osmium(IV), rhodium(III) and platinum(IV)

description: The objective of this research work was to develop a simple, highly sensitive and precise method for spectrophotometric determination of osmium(IV). <i>O</i>-Methylphenyl thiourea (OMPT) coordinates with osmium(IV) as a 1:1 (osmium(IV)–OMPT) complex in hydrochloric acid media (0.8 mol l<sup>−1</sup>). The novelty of the investigated method is instant complex formation at room temperature with no need of heating or standing. The complex is stable for more than 8 days. The method is applicable over a wide linearity range (up to 110 µg ml<sup>−1</sup>). A low reagent concentration is required (2 ml, 0.009 mol l<sup>−1</sup> in ethanol). The complex exhibits maximum absorption in the range of wavelength 510–522 nm and 514 nm was selected for further study. The molar absorptivity was 1.864 × 10<sup>3</sup> l mol<sup>−1</sup> cm<sup>−1</sup>, Sandell’s sensitivity was 0.102 µg of osmium(IV) cm<sup>−2</sup>. Proposed method was successfully applied for separation and determination of osmium(IV) from binary and ternary synthetic mixtures containing associated metal ions. A scheme for mutual separation of osmium(IV), rhodium(III) and platinum(IV) is developed.
DOI: 10.6084/m9.figshare.23264861.v1
title: <strong>Metabolome of Freezing Tolerance in Apple</strong>

description: We selected annual branches treated at -10 ℃, -15 ℃, -20 ℃, -25 ℃ and -30 ℃ for 'Guoguang' metabolome determination and annual branches treated at -10 ℃, -15 ℃ and -20 ℃ for 'Fushi' metabolome determination. Other low temperature treatment conditions were the same as above. Six biological replicates were performed for each sample.
DOI: 10.17632/79h4z5yzs2
title: Data for: A Greedy Region Growing Algorithm for Adaptive Triangulation of Geometry Images

description: This data is provided to the reviewers to assist the review process. Oriiginal irregular meshes of all models mentioned in the manuscript as well as their geometry images (output of OpenGI library) and triangulations with the algorithms compared (including two variants of the proposed greedy region growing algorithm based on cost functions C_1 and C_2) are presented. The author does not claim any rights on the publicly available original mesh data.
DOI: 10.17632/jkwx6889wb
title: Data for: Enhancing the Permeability of a Carbonate Rock Core by Dissolution/Precipitation Treatment with Organophosphorus Additives Evaluated by SEM/EDS and ICP-OES

description: ICP-OES and SEM-EDS analysis results of the rock core.
DOI: 10.6084/m9.figshare.25149599.v1
title: Replication code for The Status Foundations of Conspiracy Beliefs

description: Replication code for The Status Foundations of Conspiracy Beliefs - Socius
DOI: 10.6084/m9.figshare.25365982.v1
title: WeiboText2021

description: This is a text data downloaded from Sina Weibo related to flood disasters.
DOI: 10.17632/3bmmnfb4bp
title: KITTI-SEMSEG-UNIZG

description: This is a semantic segmentation dataset collected at University of Zagreb, Faculty of Electrical Engineering and Computing. A more complete dataset description is available at http://www.zemris.fer.hr/~ssegvic/multiclod/kitti_semseg_unizg.shtml This dataset contains groundtruth semantic segmentations for 445 hand-picked images from the KITTI dataset. We start from 146 images annotated by German Ros from UAB Barcelona, improve their annotation accuracy and contribute another 299 images. The annotations feature high quality pixel-level polygonal approximations into 11 semantic classes: building, vegetation, sky, road, fence, pole, sidewalk, sign, car, pedestrian, bicyclist. Dataset was designed by Ivan Krešo and Siniša Šegvić. Images were selected by Ivan Krešo. Annotation was performed by Ivan Borko, Matija Folnović, Petra Marče, Nikola Munđer and Dino Pačandi. The annotation tool was designed by Ivan Fabijanić.
DOI: 10.17632/54yx9m6gv8
title: Natural colonization as a means to upscale restoration of subarctic woodlands in Iceland

description: Data on birch colonization was collected from 10 different areas dominated by mountain birch across Iceland. In each area, four 100 m long and 2 m wide belt transects, were laid out at least 100 m apart perpendicular to the woodland edge into the adjacent open landscape. Along each transect, all birch seedlings with mature leaves were registered and their size measured as the length of the longest shoot from the stem base at the soil surface. The birch seedlings were divided into three size classes: I: &lt;2 cm, II: 2- 20 cm and III: &gt;20 cm, thus including both seedlings and older saplings. All catkin-bearing trees within 5 meters of the transects were also registered.

The microsite occupied by each seedling in size class I was recorded using 15 different types. The microsite cover along the transects was measured using the point-intercept method (Floyd & Anderson 1987), in 50 x 50 cm quadrats at 10 m intervals along the transects. We recorded microsites at 25 regularly spaced points within the quadrats. To account for rare microsite types, which were not recorded by the 25 points, all additional microsite types present within each quadrat were recorded.

Seedling densities were related to local climate data and ecological variables, including: annual precipitation, mean wind speed and dominant wind direction from September–December (the main period for birch seed dispersal), mean growing season (May – August) temperature, elevation, soil type, dominant height of the woodland canopy and total woodland area, and presence of domestic sheep.
DOI: 10.21233/v0y6-8c07
title: Kanazawa ostracode surface sample dataset

description: Raw data for the Kanazawa ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.8324537.v1
title: Children in Nature: lived experiences, knowledge and belonging

description: Abstract: This study is about the lived experiences of children in nature and the repercussions in their biopsychosocial development. From a Spinozean perspective, it is understood that everything is constructed from nature, whereby humans are beings of nature and, simultaneously, of culture. The study demonstrates their biophilic condition and discusses the drawings and speech of children from Tupinambá de Olivença and Mura ethnicities and of non-indigenous children from New York, with the aim of our approximating to their ecological knowledge and their feelings in relation to the natural universe of which they are part. This approach is reflected upon within indigenous and urban school education, considering elements of K-12 education guidelines and studies on human rights and the environment.
DOI: 10.6084/m9.figshare.22299679.v2
title: The Database of Predictive Targets of miRNA let-7b.zip

description: We filtered let-7b binding sites in the 3'UTRs of transcripts encoding proteins involved in fibrogenesis in Mø using online RNA databases. Briefly, we intersected the top 100 most reliable target genes from the miRNA target prediction websites (TargetScan, miRDB and miRBase) and then selected the genes most likely to be associated with fibrosis in macrophages for verification.
DOI: 10.17632/5ydbc82mjr
title: Materials GAN

description: GAN to 'reconstruct' sthocastic heterogeneous materials
DOI: 10.17632/wy2h7dbgzd
title: Validating the optimal classification approach using of ICD-10 codes to identify dermatology patients with acne

description: Supplemental Table 1
DOI: 10.6084/m9.figshare.19276493.v1
title: Supplementary Material for: Pretreatment Positron Emission Tomography with 18F-Fluorodeoxyglucose May Be a Useful New Predictor of early Progressive Disease Following Atezolizumab plus Bevacizumab in Patients with Unresectable Hepatocellular Carcinoma

description: Medicine
DOI: 10.6084/m9.figshare.3840657.v2
title: Multiple Testing in Regression Models With Applications to Fault Diagnosis in the Big Data Era

description: Motivated by applications to root-cause identification of faults in multistage manufacturing processes that involve a large number of tools or equipment at each stage, we consider multiple testing in regression models whose outputs represent the quality characteristics of a multistage manufacturing process. Because of the large number of input variables that correspond to the tools or equipments used, this falls in the framework of regression modeling in the modern era of big data. On the other hand, with quick fault detection and diagnosis followed by tool rectification, sparsity can be assumed in the regression model. We introduce a new approach to address the multiple testing problem and demonstrate its advantages over existing methods. We also illustrate its performance in an application to semiconductor wafer fabrication that motivated this development. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.4434992
title: Biogeography and ecology of the genus <i>Turbinicarpus</i> (Cactaceae): environmental controls of taxa richness and morphology

description: The biogeography and the ecology of the genus <i>Turbinicarpus</i> are scarcely known and the taxonomic segregation of the genus <i>Rapicactus</i> from <i>Turbinicarpus</i> has been debated. The present study aims to (i) evaluate the distribution of all taxa of <i>Turbinicarpus</i> in the full distributional range of the genus (NE Mexico); (ii) investigate the potential ecological divergence between <i>Rapicactus</i> and <i>Turbinicarpus</i>; and (iii) analyse the influence of environmental variables on plant morphology. The distribution pattern of all taxa belonging to the genus <i>Turbinicarpus</i> s.l. (<i>Turbinicarpus</i> + <i>Rapicactus</i>) was mapped using information from 12 herbaria, as well as unpublished databases. The study area was divided into cells of 25 km × 25 km. The relationships between taxa richness, sampling effort and environmental variables were tested by using grid data, via spatially explicit models. The elevational distribution of populations and the effects of climate, latitude and elevation on the mean steam diameter of the populations were separately investigated for <i>Turbinicarpus</i> and <i>Rapicactus</i>. <i>Turbinicarpus</i> s.l. taxa richness is highest within 100°W and 101°W longitude, about 2500 km north of the equator, with maximum diversity in areas with a mean annual temperature of 17–19 °C and a mean annual rainfall of 550–650 mm. A significant relationship was observed between taxa richness and sampling effort, and between taxa richness and longitude, mean annual rainfall and calcium-rich substrate. <i>Rapicactus</i> taxa were found to grow at higher elevations compared with <i>Turbinicarpus</i>. Body size of the plants showed a negative relationship with latitude and elevation in <i>Turbinicarpus</i>, and a positive one with latitude in <i>Rapicactus</i>. The results showed that the genus <i>Turbinicarpus</i> s.l. presents diversity hotspots in the floristic regions of Chihuahuan Desert and Sierra Madre Oriental. The responses of <i>Rapicactus</i> and <i>Turbinicarpus</i> to latitudinal and elevational gradients were different, supporting the segregation of <i>Rapicactus</i> from <i>Turbinicarpus</i>.
DOI: 10.17632/mg73b2wkr2
title: Supplementary data for the Ph.D. thesis "Experimental study of the origin of mass-independent isotopic fractionations in cosmochemistry" for the Hiroshima glasses (chapter V)

description: These different files are the supplementary data not added to Chapter V of the Ph.D. thesis "Experimental study of the origin of mass-independent isotopic fractionations in cosmochemistry" and of the article: "Condensation of the fallout glasses in the Hiroshima nuclear fireball resulting in oxygen Mass-independent Fractionation". The supplementary data (S7) are backscattered electron and optical images of the Hiroshima glasses. The two table files present the chemical, triple oxygen and silicon isotope compositions for Hiroshima glasses. The chemical data file (ST1) shows the chemical composition of 94 Hiroshima glasses. This data was obtained by analyses with a Zeiss-EVO Scanning Electron Microscope (IPGP-Paris), a CAMECA SX-100 electron microprobe (Camparis-Paris), and a JXA-8530F field emission electron microprobe (Natural History Museum of Vienna). The oxygen and silicon triple isotope composition data (ST2) presents the result of analyses realized with the CAMECA IMS 1270 E7 ion microprobe (CNRS-CRPG, Nancy) on 20 Hiroshima glasses.
DOI: 10.5522/04/28507097.v1
title: NHS dose response relationship

description: The bicinchoninic acid (BCA) assay is a colorimetric assay that measures protein concentration in a sample based on a chemical reaction that causes a change of colour. Peptide bonds and certain amino acids such as cysteine, tryptophan, and tyrosine enable the reduction of cupric ions (Cu<sup>2+</sup>) to cuprous ions (Cu<sup>+</sup>) in an alkaline medium, also known as the biuret reaction. The resulting cuprous ions then react with the sodium of two bicinchoninic acids to generate a purple colour, the purple complexThe dataset above presents the optical density from the purple complex measured from an increased concentration of nhs n-hydroxysuccinimide, one of the reagents used in conjugating antibodies to polymeric nanoparticles
DOI: 10.6084/m9.figshare.20319198.v1
title: Computational assay to design a multi-epitope-based therapeutic vaccine for latent HIV-1 infection_TableS6.pdf

description: <strong>Table S6: </strong>Predicted non-allergenic, immunogenic CD4+ and CD8+ T-cell epitopes of HIV-1 latency biomarkers CALR, SFRP1, and SUMO1
DOI: 10.6084/m9.figshare.26129038.v1
title: MPOX transcriptome dataset

description: Monkeypox virus transcriptome analysis carried out by long-read sequencing
DOI: 10.6084/m9.figshare.26334871.v1
title: Funcatioal annotation of 8,799 vContigs

description: Funcatioal annotation of 8,799 vContigs
DOI: 10.6084/m9.figshare.7021691.v1
title: Bird level data.csv

description: Raw data at individual bird level for all behavioural, EEG and pathology parameters.
DOI: 10.17632/p39kb4fshj
title: Parallel point defect identification in molecular dynamics simulations without post-processing: A compute and dump style for LAMMPS

description: Two classes for the molecular dynamics program LAMMPS – one compute style and one dump style – are presented that are designed to identify, count, and output point defects in cascade damage and related molecular dynamics simulations. The calculations are done in parallel across multiple MPI processes, and can be done at the same time as the original simulation. This drastically reduces storage requirements by eliminating the need to post-process every atom in the system. Non-cubic lattices, free surfaces, and large voids can be eliminated from the output by suitable choices of the reference lattice. The classes are derived from LAMMPS’s Dump and Compute classes, and pose no additional overhead to LAMMPS if they are not used.
DOI: 10.6084/m9.figshare.19508626.v1
title: Supplementary Material for: Ocular Abnormalities in Patients with Vitiligo: A Systematic Review and Meta-Analysis

description: <b><i>Background:</i></b> Vitiligo is a skin depigmentation disorder that results from the autoimmune destruction of cutaneous melanocytes. Several ocular abnormalities, including uveitis, dry eye, glaucoma, and retinal diseases, have been reported in patients with vitiligo. The aim of our study was to investigate the association of ocular abnormalities with vitiligo. <b><i>Methods:</i></b> This meta-analysis was registered in PROSPERO (CRD42021224167) and adhered to MOOSE checklist and PRISMA guidance for all processes. PubMed, Embase, Web of Science, and Cochrane databases were searched for studies examining the association between ocular abnormalities and vitiligo from inception to December 10, 2020. Studies recruiting patients with Sjogren’s syndrome or Vogt-Koyanagi-Harada syndrome were excluded. The primary outcomes were the Schirmer test, tear film break-up time (TBUT), and ocular surface disease index (OSDI) of vitiligo patients compared to the controls. The risk of bias of the selected studies was assessed using the Newcastle-Ottawa Scale (NOS) of case-control studies. <b><i>Results:</i></b> This meta-analysis of 16 case-control studies showed that patients with vitiligo had significantly lower Schirmer test values (mean difference [MD], −1.65; 95% CI, −2.81 to −0.49), shorter TBUTs (MD, −4.66; 95% CI, −7.05 to −2.26), higher ocular surface disease indices (MD, 18.02; 95% CI, 5.7–30.35), and thinner subfoveal choroidal thicknesses (MD, −53.10; 95% CI, −69.84 to −36.36). No significant differences were found in the prevalence of glaucoma and the level of intraocular pressure. <b><i>Conclusions:</i></b> Our study supports an association between dry eye and thinner subfoveal choroidal thickness in patients with vitiligo. Dermatologists should be aware of these possible comorbidities and refer vitiligo patients with ocular symptoms to ophthalmologists for further management.
DOI: 10.6084/m9.figshare.25301308.v2
title: Raw data of the manuscript "A Comprehensive Infodemiology Analysis on Google Users' Health Interests in Information Disorders"

description: Raw data of the manuscript "A Comprehensive Infodemiology Analysis on Google Users' Health Interests in Information Disorders"
DOI: 10.6084/m9.figshare.17701103.v1
title: EEG Dataset for RSVP and P300 Speller Brain-Computer Interfaces

description: EEG dataset for subject 02
DOI: 10.17632/wwgw5vsfg3
title: Data set of users’ perceptions about the services provided by a Library

description: The following question is alive: how to evaluate the users’ satisfaction regarding the services provided by a library? Duarte and Costa [1] proposed and applied a framework evaluating the satisfaction of the users of a library, regarding the library services. That proposal was organized into three steps: a systematized literature review that has supported the construction of a questionnaire; a data collection though applying the questionnaire to a sample; and, the analysis of the data collected. The results from the literature review were the input for defining the questionnaire for evaluating the users’ satisfaction. Here we describe ta full dataset containing the perceptions of users about the services provided by a library specialized in the field of nuclear technology, sited in Rio de Janeiro Brazil. The sample was composed of 117 respondents of whom 94 returned forms. This data was also used in Costa and Duarte [2] to support the validation of use of ELECTRE ME as a method to evaluate quality of services in a multicriteria and multiple evaluator environment.
DOI: 10.6084/m9.figshare.17211914.v2
title: Supplementary Material for: The dot-probe attention bias task as a method to assess psychological wellbeing after anesthesia: A study with adult female long-tailed macaques (Macaca fascicularis)

description: Understanding the impact routine research and laboratory procedures have on animals is crucial to improving their wellbeing and to the success and reproducibility of the research they are involved in. Cognitive measures of welfare offer insight into animals’ internal psychological state, but require validation. Attention bias - the tendency to attend to one type of information over another – is a cognitive phenomenon documented in humans and animals that is known to be modulated by affective state (i.e., emotions). Hence, changes in attention bias may offer researchers a deeper perspective of their animals’ psychological wellbeing. The dot-probe task is an established method for quantifying attention bias in humans (by measuring reaction time to a dot-probe replacing pairs of stimuli), but has yet to be validated in animals. We developed a dot-probe task for long-tailed macaques (Macaca fascicularis) to determine if the task can detect changes in attention bias following anesthesia, a context known to modulate attention and trigger physiological arousal in macaques. Our task included the following features: stimulus pairs of threatening and neutral facial expressions of conspecifics and their scrambled counterparts, two stimuli durations (100 and 1000 ms), and counterbalancing of the dot-probe’s position on the touchscreen (left, right) and location relative to the threatening stimulus. We tested eight group-housed adult females on different days relative to being anesthetized (baseline and one-, three-, seven-, and 14-days after). At baseline, monkeys were vigilant to threatening content when stimulus pairs were presented for 100 ms, but not 1000 ms. On the day immediately following anesthesia, we found evidence that attention bias changed to an avoidance of threatening content. Attention bias returned to threat vigilance by the third day post-anesthesia and remained so up to the last day of testing (14 days after anesthesia). We also found that attention bias was independent of the type of stimuli pair (i.e., whole face vs. scrambled counterparts), suggesting that the scrambled stimuli retained aspects of the original stimuli. Nevertheless, whole faces were more salient to the monkeys as responses to these trials were generally slower than to scrambled stimulus pairs. Overall, our study suggests it is feasible to detect changes in attention bias following anesthesia using the dot-probe task in non-human primates. Our results also reveal important aspects of stimulus preparation and experimental design.
DOI: 10.6084/m9.figshare.23910114.v1
title: FileS2_surface_mesh_DVT.stl

description: 3D-surface mesh of peri- and intrapancreatic vascular network imaged by digital volume tomography.
DOI: 10.6084/m9.figshare.24750681.v1
title: Gene annotation of Cochlearia groenlandica haplotig 2

description: Gene annotation file of Cochlearia groenlandica haplotig 2