cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11634885.v1
title: MOESM13 of Co-expression network analysis predicts a key role of microRNAs in the adaptation of the porcine skeletal muscle to nutrient supply

description: Additional file 13: Table S13. Gene co-expression modules significantly associated with meat quality and fatty acids composition traits according to the WGCNA algorithm (AL-T0/AL-T1 contrast).
DOI: 10.6084/m9.figshare.11634876
title: MOESM12 of Co-expression network analysis predicts a key role of microRNAs in the adaptation of the porcine skeletal muscle to nutrient supply

description: Additional file 12: Table S12. Regulatory Impact Factor scores (RIF1 and RIF2) for miRNAs classified by the PCIT algorithm as meaningful regulators in the AL-T0/AL-T1 and AL-T0/AL-T2 contrasts.
DOI: 10.6084/m9.figshare.11634876.v1
title: MOESM12 of Co-expression network analysis predicts a key role of microRNAs in the adaptation of the porcine skeletal muscle to nutrient supply

description: Additional file 12: Table S12. Regulatory Impact Factor scores (RIF1 and RIF2) for miRNAs classified by the PCIT algorithm as meaningful regulators in the AL-T0/AL-T1 and AL-T0/AL-T2 contrasts.
DOI: 10.6084/m9.figshare.11634867
title: MOESM11 of Co-expression network analysis predicts a key role of microRNAs in the adaptation of the porcine skeletal muscle to nutrient supply

description: Additional file 11: Table S11. miRNAs predicted to bind the 3′-UTR of the porcine PDK4 gene.
DOI: 10.6084/m9.figshare.11634870
title: MOESM2 of Comparative transcriptomics reveals candidate carotenoid color genes in an East African cichlid fish

description: Additional file 2: Table S1. Differentially expressed genes identified in the RNA-Seq experiment.
DOI: 10.6084/m9.figshare.11634867.v1
title: MOESM11 of Co-expression network analysis predicts a key role of microRNAs in the adaptation of the porcine skeletal muscle to nutrient supply

description: Additional file 11: Table S11. miRNAs predicted to bind the 3′-UTR of the porcine PDK4 gene.
DOI: 10.6084/m9.figshare.11634870.v1
title: MOESM2 of Comparative transcriptomics reveals candidate carotenoid color genes in an East African cichlid fish

description: Additional file 2: Table S1. Differentially expressed genes identified in the RNA-Seq experiment.
DOI: 10.6084/m9.figshare.11634858
title: MOESM10 of Co-expression network analysis predicts a key role of microRNAs in the adaptation of the porcine skeletal muscle to nutrient supply

description: Additional file 10: Table S10. Identification of conserved mRNA targets for selected highly expressed and differentially expressed miRNAs based on the TargetScan Context++ score.
DOI: 10.6084/m9.figshare.11634858.v1
title: MOESM10 of Co-expression network analysis predicts a key role of microRNAs in the adaptation of the porcine skeletal muscle to nutrient supply

description: Additional file 10: Table S10. Identification of conserved mRNA targets for selected highly expressed and differentially expressed miRNAs based on the TargetScan Context++ score.
DOI: 10.6084/m9.figshare.11634750
title: Lysimachia christinae Hance-Supplementary material.rar

description: Supplementary data on <b><i>Lysimachia christinae </i>Hance<i> </i></b> are in this database
DOI: 10.6084/m9.figshare.11634735
title: Extent, distribution and origin of non-native forest tree species in Europe

description: The management of non-native tree species in European forests has a long history, but the information on the current number and geographic distribution of these species in European forests is incomplete and scattered across various datasets. This study aims to perform an inventory of the most frequent non-native tree species growing in European forests and analyse their current extent, geographic distribution and geographic origin. Our results show that at least 150 non-native tree species are currently growing in European forests and provenance trials. The genera represented by largest number of species are <i>Eucalyptus</i>, <i>Pinus, Acacia</i> and <i>Abies</i>. Species growing at the largest areas are <i>Robinia pseudoacacia</i> (2.44 million ha), <i>Eucalyptus globulus</i> (1.46 million ha), <i>Picea sitchensis</i> (1.16 million ha) and <i>Pseudotsuga menziesii</i> (0.83 million ha). In total, non-native tree species in Europe are found in an area of approximately 8.54 million ha, or 4.0% of the European forest area, and the five most abundant species account for up to 77% of this area. The largest number of these 150 species were introduced from North America (71), followed by Asia (45) and Australia (20). North American species occupy by far the largest area.
DOI: 10.6084/m9.figshare.11634750.v1
title: Lysimachia christinae Hance-Supplementary material.rar

description: Supplementary data on <b><i>Lysimachia christinae </i>Hance<i> </i></b> are in this database
DOI: 10.6084/m9.figshare.11634735.v1
title: Extent, distribution and origin of non-native forest tree species in Europe

description: The management of non-native tree species in European forests has a long history, but the information on the current number and geographic distribution of these species in European forests is incomplete and scattered across various datasets. This study aims to perform an inventory of the most frequent non-native tree species growing in European forests and analyse their current extent, geographic distribution and geographic origin. Our results show that at least 150 non-native tree species are currently growing in European forests and provenance trials. The genera represented by largest number of species are <i>Eucalyptus</i>, <i>Pinus, Acacia</i> and <i>Abies</i>. Species growing at the largest areas are <i>Robinia pseudoacacia</i> (2.44 million ha), <i>Eucalyptus globulus</i> (1.46 million ha), <i>Picea sitchensis</i> (1.16 million ha) and <i>Pseudotsuga menziesii</i> (0.83 million ha). In total, non-native tree species in Europe are found in an area of approximately 8.54 million ha, or 4.0% of the European forest area, and the five most abundant species account for up to 77% of this area. The largest number of these 150 species were introduced from North America (71), followed by Asia (45) and Australia (20). North American species occupy by far the largest area.
DOI: 10.6084/m9.figshare.11634681
title: Supplemental Data set 1.xlsx

description: Sample information
DOI: 10.6084/m9.figshare.11634681.v1
title: Supplemental Data set 1.xlsx

description: Sample information
DOI: 10.6084/m9.figshare.11634663
title: AhpD

description: Supporting information for publication.
DOI: 10.26180/5e212eb30b4f4
title: SEP and hypertension data for J Am Heart Assoc. 2020;9:e014486

description: These data comprise those for an article published in the Journal of the American Medical Association (J Am Heart Assoc. 2020;9:e014486). The data include categories of hypertension, education, income, and risk factors.<br>
DOI: 10.6084/m9.figshare.11634663.v1
title: AhpD

description: Supporting information for publication.
DOI: 10.6084/m9.figshare.11634360
title: China SSP1 Population 2020

description: China SSP1 Population 2020
DOI: 10.6084/m9.figshare.11634360.v1
title: China SSP1 Population 2020

description: China SSP1 Population 2020
DOI: 10.6084/m9.figshare.11634321.v1
title: Supplementary Tables

description: Supplementary Tables for Shaiber et al (2020).
DOI: 10.6084/m9.figshare.11634315
title: EucFACE carbon budget data repository

description: This is the data repository for the EucFACE carbon budget synthesis paper. <br><br>
DOI: 10.6084/m9.figshare.11633508
title: data.xlsx

description: for manuscript "Squeezed and Released Self: Using a Squeeze Machine to Degrade the Peri-Personal Space (PPS) Boundary"
DOI: 10.6084/m9.figshare.11633508.v1
title: data.xlsx

description: for manuscript "Squeezed and Released Self: Using a Squeeze Machine to Degrade the Peri-Personal Space (PPS) Boundary"
DOI: 10.6084/m9.figshare.11633352
title: Crop_Suitability_3Method.zip

description: Modeled suitability for 12 commodity crops. Crop suitability determined as the union of three suitability methods: 1) ecocrop; 2) maxent; 3) frequency of extreme temperatures. Suitability modeled for baseline climate (1960-1990) and future climate scenarios (rcp45 and rcp85; 2040-2060 and 2060-2080). Data provided here was used in all analyses appearing in Hannah <i>et al</i>. (2020). The environmental consequences of climate-driven agricultural frontiers. PLOS ONE.
DOI: 10.6084/m9.figshare.11633352.v1
title: Crop_Suitability_3Method.zip

description: Modeled suitability for 12 commodity crops. Crop suitability determined as the union of three suitability methods: 1) ecocrop; 2) maxent; 3) frequency of extreme temperatures. Suitability modeled for baseline climate (1960-1990) and future climate scenarios (rcp45 and rcp85; 2040-2060 and 2060-2080). Data provided here was used in all analyses appearing in Hannah <i>et al</i>. (2020). The environmental consequences of climate-driven agricultural frontiers. PLOS ONE.
DOI: 10.6084/m9.figshare.11632932
title: Data files for Multi-model forecasts of the ongoing Ebola epidemic in the Democratic Republic of Congo, March - October 2019

description: Data files extracted from the 2018-19 Ebola epidemic curves published by the World Health Organization in the situation reports 33-61. The data files include 5 variables; the week of symptom onset, raw incidence, reporting delay adjusted incidence, 95% lower bound of adjusted incidence and the 95% upper bound of adjusted incidence.
DOI: 10.6084/m9.figshare.11632926
title: Data for Paper1

description: This is the Data that was used in the Paper
DOI: 10.6084/m9.figshare.11632899
title: No relationship between the digit ratios (2D:4D) and salivary testosterone change: Study on men under an acute exercise

description: Marta Kowal<sup>1</sup>, Piotr Sorokowski<sup>1*</sup>, Agnieszka Żelaźniewicz<sup>2</sup>, Judyta Nowak<sup>2</sup>, Sylwester Orzechowski<sup>1</sup>, Grzegorz Żurek<sup>3</sup>, Alina Żurek<sup>1</sup>, Anna Juszkiewicz<sup>1</sup>, Lidia Wojtycka<sup>1</sup>, Wiktoria Sieniuć<sup>1</sup>, Małgorzata Poniatowska<sup>1</sup>, Karolina Tarnowska<sup>1</sup>, Kaja Kowalska<sup>1</sup>, Katarzyna Drabik<sup>1</sup>, Patrycja Łukaszek<sup>1</sup>, Krzysztof Krawczyk<sup>4</sup>, Tadeusz Stefaniak<sup>3</sup>, Natalia Danek<sup>3</sup>. <sup>1</sup>Institute of Psychology, University of Wrocław, Wrocław, Poland.<br> <sup>2</sup>Department of Human Biology, University of Wrocław, Wrocław, Poland.<br> <sup>3</sup>Wroclaw Sports University, Wroclaw, Poland.<br> <sup>4</sup>Maria Curie-Skłodowska University, Lublin, Poland.<br><b>*Correspondence: <br> </b>Piotr Sorokowski<br> sorokowskipiotr@yahoo.co.uk<br>
DOI: 10.6084/m9.figshare.11632926.v1
title: Data for Paper1

description: This is the Data that was used in the Paper
DOI: 10.6084/m9.figshare.11632707
title: mu69_fr2kf_lopoly.obj

description: Shape model used for thermal models.<br>
DOI: 10.6084/m9.figshare.11632899.v1
title: No relationship between the digit ratios (2D:4D) and salivary testosterone change: Study on men under an acute exercise

description: Marta Kowal<sup>1</sup>, Piotr Sorokowski<sup>1*</sup>, Agnieszka Żelaźniewicz<sup>2</sup>, Judyta Nowak<sup>2</sup>, Sylwester Orzechowski<sup>1</sup>, Grzegorz Żurek<sup>3</sup>, Alina Żurek<sup>1</sup>, Anna Juszkiewicz<sup>1</sup>, Lidia Wojtycka<sup>1</sup>, Wiktoria Sieniuć<sup>1</sup>, Małgorzata Poniatowska<sup>1</sup>, Karolina Tarnowska<sup>1</sup>, Kaja Kowalska<sup>1</sup>, Katarzyna Drabik<sup>1</sup>, Patrycja Łukaszek<sup>1</sup>, Krzysztof Krawczyk<sup>4</sup>, Tadeusz Stefaniak<sup>3</sup>, Natalia Danek<sup>3</sup>. <sup>1</sup>Institute of Psychology, University of Wrocław, Wrocław, Poland.<br> <sup>2</sup>Department of Human Biology, University of Wrocław, Wrocław, Poland.<br> <sup>3</sup>Wroclaw Sports University, Wroclaw, Poland.<br> <sup>4</sup>Maria Curie-Skłodowska University, Lublin, Poland.<br><b>*Correspondence: <br> </b>Piotr Sorokowski<br> sorokowskipiotr@yahoo.co.uk<br>
DOI: 10.6084/m9.figshare.11632899.v2
title: No relationship between the digit ratios (2D:4D) and salivary testosterone change: Study on men under an acute exercise

description: Marta Kowal<sup>1</sup>, Piotr Sorokowski<sup>1*</sup>, Agnieszka Żelaźniewicz<sup>2</sup>, Judyta Nowak<sup>2</sup>, Sylwester Orzechowski<sup>1</sup>, Grzegorz Żurek<sup>3</sup>, Alina Żurek<sup>1</sup>, Anna Juszkiewicz<sup>1</sup>, Lidia Wojtycka<sup>1</sup>, Wiktoria Sieniuć<sup>1</sup>, Małgorzata Poniatowska<sup>1</sup>, Karolina Tarnowska<sup>1</sup>, Kaja Kowalska<sup>1</sup>, Katarzyna Drabik<sup>1</sup>, Patrycja Łukaszek<sup>1</sup>, Krzysztof Krawczyk<sup>4</sup>, Tadeusz Stefaniak<sup>3</sup>, Natalia Danek<sup>3</sup>. <sup>1</sup>Institute of Psychology, University of Wrocław, Wrocław, Poland.<br> <sup>2</sup>Department of Human Biology, University of Wrocław, Wrocław, Poland.<br> <sup>3</sup>Wroclaw Sports University, Wroclaw, Poland.<br> <sup>4</sup>Maria Curie-Skłodowska University, Lublin, Poland.<br><b>*Correspondence: <br> </b>Piotr Sorokowski<br> sorokowskipiotr@yahoo.co.uk<br>
DOI: 10.6084/m9.figshare.11632707.v1
title: mu69_fr2kf_lopoly.obj

description: Shape model used for thermal models.<br>
DOI: 10.6084/m9.figshare.11632104
title: Impacts of environmental heterogeneity on natural selection in a wild bird population (Database)

description: All analyses described in the paper "Impacts of environmental heterogeneity on natural selection in a wild bird population" were performed with this database as well as from data sourced from Environment Canada's web site.
DOI: 10.6084/m9.figshare.11632104.v2
title: Impacts of environmental heterogeneity on natural selection in a wild bird population (Database)

description: All analyses described in the paper "Impacts of environmental heterogeneity on natural selection in a wild bird population" were performed with this database as well as from data sourced from Environment Canada's web site.
DOI: 10.6084/m9.figshare.11632074
title: neutrophil.bw

description: 3090 neutrophil for visualization
DOI: 10.6084/m9.figshare.11632104.v1
title: Impacts of environmental heterogeneity on natural selection in a wild bird population (Database)

description: All analyses described in the paper "Impacts of environmental heterogeneity on natural selection in a wild bird population" were performed with this database as well as from data sourced from Environment Canada's web site.
DOI: 10.6084/m9.figshare.11632074.v1
title: neutrophil.bw

description: 3090 neutrophil for visualization
DOI: 10.6084/m9.figshare.11629377
title: Habitat Suitability Model for Ridgway's Rail

description: Predicted breeding-season occupancy probability for Ridgway's Rail.<br> Analyses described by:<br> Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.6084/m9.figshare.11629314
title: De novo transcriptome_filter-out

description: This folder contains the transcripts obtained after filter out the transcripts from non-plant species(e.g. endophytic fungi). The plant transcripts were characterized using EggNOG, TransDECODER and BLAST-x tools.The "transcriptome_filter out.xlsx" archive contains the 27,429 transcripts used in abundance quantification and differential expression analysis. Within this archive the "Gene annotation" sheet includes the transcripts ID, EggNOG description, taxonomy, best BLAST-x hit, translation characteristics and, in transcripts codifying transcription factors, the gene family to which they belong.The "transcriptome_filter out.fasta" archive includes the nucleotide sequence of 27,429 transcripts mentioned.<br>
DOI: 10.6084/m9.figshare.11629377.v1
title: Habitat Suitability Model for Ridgway's Rail

description: Predicted breeding-season occupancy probability for Ridgway's Rail.<br> Analyses described by:<br> Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.6084/m9.figshare.11629092
title: Meal frequency and BMI

description: Dofile for statistical analysis (using STATA software)
DOI: 10.6084/m9.figshare.11629092.v1
title: Meal frequency and BMI

description: Dofile for statistical analysis (using STATA software)
DOI: 10.6084/m9.figshare.11629011
title: data.tar.gz

description: A collection of several data sets used to illustrate fitting (generalized) linear mixed-effects models. Individual data sets are in Feather format (https://github.com/wesm/feather). They include Dyestuff, Dyestuff2, Penicillin, Pastes, InstEval, sleepstudy, cbpp, Contraception, grouseticks and VerbAgg from the lme4 package for R. The kb07 data is from github.com/dalejbarr/kronmueller-barr-2007 and ml1m is from https://grouplens.org/datasets/movielens/1m/<br>
DOI: 10.6084/m9.figshare.11629011.v1
title: data.tar.gz

description: A collection of several data sets used to illustrate fitting (generalized) linear mixed-effects models. Individual data sets are in Feather format (https://github.com/wesm/feather). They include Dyestuff, Dyestuff2, Penicillin, Pastes, InstEval, sleepstudy, cbpp, Contraception, grouseticks and VerbAgg from the lme4 package for R. The kb07 data is from github.com/dalejbarr/kronmueller-barr-2007 and ml1m is from https://grouplens.org/datasets/movielens/1m/<br>
DOI: 10.6084/m9.figshare.11628603
title: Speed and road grade dynamics of urban trips on electric and conventional bicycles

description: Electric-assist bicycles (e-bikes) allow cyclists to travel at higher speeds and climb hills with less effort. Beyond average speed differences, little is known about the unique travel dynamics of e-bikes. The objective of this study is to examine systematic differences in speed and road grade dynamics between electric and conventional bicycle trips. Data were collected for 1451 utilitarian bicycle trips in Vancouver, Canada (10% on e-bikes). A subset of conventional bicycle trips were matched to the age, gender, purpose, and terrain characteristics of the e-bike sample. Biking schedules were constructed to represent the archetypal speed and grade dynamics of each set of trips. Results show that in addition to higher speeds, e-bike trips have significantly greater speed dynamics, substantially increasing the motive power and energy required for e-bike travel. Speed and grade dynamics are important aspects of microscopic cycling behaviour, with applications including vehicle design, facility design, and health evaluation.
DOI: 10.6084/m9.figshare.11628603.v1
title: Speed and road grade dynamics of urban trips on electric and conventional bicycles

description: Electric-assist bicycles (e-bikes) allow cyclists to travel at higher speeds and climb hills with less effort. Beyond average speed differences, little is known about the unique travel dynamics of e-bikes. The objective of this study is to examine systematic differences in speed and road grade dynamics between electric and conventional bicycle trips. Data were collected for 1451 utilitarian bicycle trips in Vancouver, Canada (10% on e-bikes). A subset of conventional bicycle trips were matched to the age, gender, purpose, and terrain characteristics of the e-bike sample. Biking schedules were constructed to represent the archetypal speed and grade dynamics of each set of trips. Results show that in addition to higher speeds, e-bike trips have significantly greater speed dynamics, substantially increasing the motive power and energy required for e-bike travel. Speed and grade dynamics are important aspects of microscopic cycling behaviour, with applications including vehicle design, facility design, and health evaluation.
DOI: 10.6084/m9.figshare.11628582
title: automated-sc-RNA-seq-analysis-in-the-cloud

description: Data to use with https://github.com/NCBI-Codeathons/automated-sc-RNA-seq-analysis-in-the-cloud
DOI: 10.6084/m9.figshare.11628459
title: Nonparametric tests of independence based on interpoint distances

description: We present novel tests for the hypothesis of independence when the number of variables is larger than the number of vector observations. We show that two multivariate normal vectors are independent if and only if their interpoint distance are independent. The proposed test statistics exploit different properties of the sample interpoint distances. A simulation study compares the new tests with three existing tests under various scenarios, including monotone and non-monotone dependence structures. Numerical results show that the new methods are effective for independence testing.
DOI: 10.6084/m9.figshare.11628459.v1
title: Nonparametric tests of independence based on interpoint distances

description: We present novel tests for the hypothesis of independence when the number of variables is larger than the number of vector observations. We show that two multivariate normal vectors are independent if and only if their interpoint distance are independent. The proposed test statistics exploit different properties of the sample interpoint distances. A simulation study compares the new tests with three existing tests under various scenarios, including monotone and non-monotone dependence structures. Numerical results show that the new methods are effective for independence testing.
DOI: 10.6084/m9.figshare.11628159
title: init cond p=1e7 w=1e-2

description: init cond p=1e7 w=1e-2
DOI: 10.6084/m9.figshare.11628159.v1
title: init cond p=1e7 w=1e-2

description: init cond p=1e7 w=1e-2
DOI: 10.6084/m9.figshare.11628054
title: Topaz geneva rootstock trial Laboratory data 2015 -18.xls

description: The apple replanting disease (ARD) is a major problem in replanted apple orchards. Depressions in growth and yield are symptomatic and mainly caused by nematodes (<i>Pratylenchus</i>) and soil borne funghi <i>(e.g. Rhizoctonia</i>, <i>Phytophthora</i>, <i>Pythium).</i>For organic growers, besides bio-fumigation the use of tolerant rootstocks has been discussing to be an efficient way to prevent ARD. The purpose of this study was the evaluation of some rootstocks from Geneva in an organically treated replanted apple orchard, compared with the standard M9 and also with the stronger rootstocks M7 and MM111, which have been discussing the last years as alternatives for organic growers for extensive production systems.
DOI: 10.6084/m9.figshare.11628054.v1
title: Topaz geneva rootstock trial Laboratory data 2015 -18.xls

description: The apple replanting disease (ARD) is a major problem in replanted apple orchards. Depressions in growth and yield are symptomatic and mainly caused by nematodes (<i>Pratylenchus</i>) and soil borne funghi <i>(e.g. Rhizoctonia</i>, <i>Phytophthora</i>, <i>Pythium).</i>For organic growers, besides bio-fumigation the use of tolerant rootstocks has been discussing to be an efficient way to prevent ARD. The purpose of this study was the evaluation of some rootstocks from Geneva in an organically treated replanted apple orchard, compared with the standard M9 and also with the stronger rootstocks M7 and MM111, which have been discussing the last years as alternatives for organic growers for extensive production systems.