cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4382330
title: East Asian calendar conversion database

description: SQL dump (MySQL 5.x) from a database for converting East Asian (here: Chinese, Japanese, Korean) calendars. The data is also available for download at http://authority.dila.edu.tw/docs/open_content/download.php, where separate datasets for Chinese, Korean, and Japanese calendars are available. An interface for querying the data is here: http://authority.dila.edu.tw/time/. Using the Julian Day as common standard it allows mapping of East Asian calendar dates to the Julian, proleptic Gregorian, and Gregorian calendar. It is the currently largest and most detailed open access dataset for this purpose. The database was compiled between 2008 and 2011 at the Dharma Drum Institute of Liberal Arts, Jinshan, Taiwan. The data for the Japanese calendar is based on material provided by Takashi Suga. A publication describing the dataset is Marcus BINGENHEIMER, Jen-Jou HUNG, Simon WILES, Boyong ZHANG. “Modeling East Asian Calendars in an Open Source Authority Database.”<em> International Journal of Humanities and Arts Computing</em> Vol. 10-2, pp. 127-144. DOI: 10.3366/ijhac.2016.0164.
description: {"references": ["Marcus BINGENHEIMER, Jen-Jou HUNG, Simon WILES, Boyong ZHANG. \"Modeling East Asian Calendars in an Open Source Authority Database.\"\u00a0International Journal of Humanities and Arts Computing\u00a0Vol. 10-2, pp. 127-144. DOI: 10.3366/ijhac.2016.0164."]}
DOI: 10.15468/q4amjz
title: Miltochrista jarawa (Lepidoptera, Erebidae, Arctiinae, Lithosiini), a new species from the Andaman Islands, India

description: This dataset contains the digitized treatments in Plazi based on the original journal article Singh, Navneet, Volynkin, Anton V., Kirti, Jagbir Singh, Datta, Harvinder Singh (2020): Miltochrista jarawa (Lepidoptera, Erebidae, Arctiinae, Lithosiini), a new species from the Andaman Islands, India. Zootaxa 4895 (3): 445-450, DOI: https://doi.org/10.11646/zootaxa.4895.3.10
DOI: 10.5281/zenodo.3696806
title: The Complex Geometry and Dynamical Role of Stellar Wind Bubbles in Turbulent Molecular Clouds

description: Research Data Management Package for paper in Monthly Notices of the Royal Astronomical Society with same title and author list
DOI: 10.5281/zenodo.3696805
title: The Complex Geometry and Dynamical Role of Stellar Wind Bubbles in Turbulent Molecular Clouds

description: Research Data Management Package for paper in Monthly Notices of the Royal Astronomical Society with same title and author list
DOI: 10.15468/k24xhn
title: An Illustrated Key of Pyrgomorphidae (Orthoptera: Caelifera) of the Indian Subcontinent Region

description: This dataset contains the digitized treatments in Plazi based on the original journal article Zahid, Sundus, Mariño-Pérez, Ricardo, Amehmood, Sardar Azhar, Muhammad, Kushi, Song, Hojun (2020): An Illustrated Key of Pyrgomorphidae (Orthoptera: Caelifera) of the Indian Subcontinent Region. Zootaxa 4895 (3): 381-397, DOI: https://doi.org/10.11646/zootaxa.4895.3.4
DOI: 10.6084/m9.figshare.13469529
title: Abstract and Survey With Results.docx

description: A survey was conducted to determine medical librarians' knowledge of the types of clinical trials and their comfort levels in locating clinical trials for systematic reviews. The article was published in the April 2021 issue of the Journal of the Medical Library Association. The abstract, survey, and compiled results are available in this document.
DOI: 10.5286/isis.e.rb1910332-3
title: Gathering Gemology and Glassmaking

description: A set of more than 1000 specimens of glass gems enriches the collection of the National Archaeological Museum of Aquileia (Italy), in many different colours and transparencies. Glass classification generally follows elemental composition as for major (silica), minor (soda, ashes or potash) and trace components (B, F, Ti, Fe, but also Sb and Sn elements). Therefore, deriving the composition could return useful criteria for dating, provenance, manufacturing and trading issues. In agreement with the Museum, 40 significant glass gems were selected by colours, style, and gemmological criteria. Aim of the study will be the determination of different colouring and opacifying agents as well as the glassy or crystalline phases. In details, we want to disclose in a non-destructive way: (i) elemental composition (by NRCA), and (ii) phase composition (by ToF-ND) of the opacifying agents.
DOI: 10.5286/isis.e.rb1910332-4
title: Gathering Gemology and Glassmaking

description: A set of more than 1000 specimens of glass gems enriches the collection of the National Archaeological Museum of Aquileia (Italy), in many different colours and transparencies. Glass classification generally follows elemental composition as for major (silica), minor (soda, ashes or potash) and trace components (B, F, Ti, Fe, but also Sb and Sn elements). Therefore, deriving the composition could return useful criteria for dating, provenance, manufacturing and trading issues. In agreement with the Museum, 40 significant glass gems were selected by colours, style, and gemmological criteria. Aim of the study will be the determination of different colouring and opacifying agents as well as the glassy or crystalline phases. In details, we want to disclose in a non-destructive way: (i) elemental composition (by NRCA), and (ii) phase composition (by ToF-ND) of the opacifying agents.
DOI: 10.5281/zenodo.4382763
title: Slab transport of fluids to deep focus earthquake depths - thermal modeling constraints and evidence from diamonds

description: This data set contains earthquake data and thermal models of subduction zones used in Shirey, S. B., Wagner, L. S., Walter, M. J., Pearson, D. G., & van Keken, P. E., "Slab transport of fluids to deep focus earthquake depths - thermal modeling constraints and evidence from diamonds", submitted to AGU Advances. There are four zip files:<br> 1) Events.zip contains the earthquake location data;<br> 2) PTeq.zip contains the estimated pressure and temperature in the EQ locations as projected onto slab top and Moho<br> 3) ThermalModels_vtu.zip contains the temperature on the full computational grid<br> 4) ThermalModels.zip contains the temperature along the slab top and Moho for each subduction zone<br> <br> See the README files for information on the data formats.
DOI: 10.5281/zenodo.4382801
title: Dataset for "Topography-based statistical modelling reveals high spatial variability and seasonal emission patches in forest floor methane flux"

description: This dataset provides measured and upscaled forest floor methane (CH4) fluxes and soil moisture. This dataset is related to the following manuscript: Vainio et al., Topography-based statistical modelling reveals high spatial variability and seasonal emission patches in forest floor methane flux, Biogeosciences, in review. (The discussion preprint is available at https://doi.org/10.5194/bg-2020-263.)
DOI: 10.25345/c51r4x
title: MassIVE MSV000086624 - Identification of co-purified proteins with dirigent protein in Forsythia x intermedia
title: De novo bottom-up and top-down proteomics analysis of the purified soluble fraction of Forsythia x intermedia stem tissue. The protein extraction and purification protocol is described in DOI:10.1126/science.275.5298.362. De novo sequenced peptides by PEAKSPTM were combined with transcriptomics data to assemble a FASTA file for target proteins. Peptide-based datasets were processed with Byonic. Intact protein-based datasets were processed with TopPIC.
DOI: 10.5281/zenodo.4382960
title: Cosmogenic Ages from Alluvial Fans offset by Central Walker Lane Faults

description: Here are a series of cosmogenic 10Be and 36Cl ages and metadata for samples related to a faulting study southeast of Reno, NV, USA. Both 10Be and 36Cl concentrations were measured at the PRIME lab at Purdue. All 10Be samples were processed in the Geochronology Laboratories at the University of Cincinnati. The 36Cl samples were processed and analyzed at the PRIME lab. Boulder sampling focused on the largest boulders (~50–150-cm-diameter) from alluvial fan surfaces. Approximately 500 g samples were taken from the upper 2–5 cm of each of these boulders. 10Be concentrations and laboratory data are listed in these tables. The 10Be boulder exposure ages were calculated using the Cosmic Ray Exposure Program (CREp). The calculator requires input describing the geographic coordinates and elevation of the samples, local shielding of the sample, density of the sample, and estimation of the boulder erosion rates resulting from processes such as boulder grussification and spalling. The age estimates are also dependent on the assumption of particular scaling models designed to estimate the long-term production rate of cosmogenic 10Be. The 10Be ages use a production rate of 4.05 ± 0.30 at/g SiO2/yr determined at Twin Lakes, which is located at a higher elevation than the fan surfaces here, but is within 100 km of all study sites, the ERA40 atmosphere model, the Lifton-VDM2016 geomagnetic database, and the LSD scaling scheme.The 36Cl boulder ages are calculated using the CRONUS calculator for 36Cl.
DOI: 10.5281/zenodo.4382959
title: Cosmogenic Ages from Alluvial Fans offset by Central Walker Lane Faults

description: Here are a series of cosmogenic 10Be and 36Cl ages and metadata for samples related to a faulting study southeast of Reno, NV, USA. Both 10Be and 36Cl concentrations were measured at the PRIME lab at Purdue. All 10Be samples were processed in the Geochronology Laboratories at the University of Cincinnati. The 36Cl samples were processed and analyzed at the PRIME lab. Boulder sampling focused on the largest boulders (~50–150-cm-diameter) from alluvial fan surfaces. Approximately 500 g samples were taken from the upper 2–5 cm of each of these boulders. 10Be concentrations and laboratory data are listed in these tables. The 10Be boulder exposure ages were calculated using the Cosmic Ray Exposure Program (CREp). The calculator requires input describing the geographic coordinates and elevation of the samples, local shielding of the sample, density of the sample, and estimation of the boulder erosion rates resulting from processes such as boulder grussification and spalling. The age estimates are also dependent on the assumption of particular scaling models designed to estimate the long-term production rate of cosmogenic 10Be. The 10Be ages use a production rate of 4.05 ± 0.30 at/g SiO2/yr determined at Twin Lakes, which is located at a higher elevation than the fan surfaces here, but is within 100 km of all study sites, the ERA40 atmosphere model, the Lifton-VDM2016 geomagnetic database, and the LSD scaling scheme.The 36Cl boulder ages are calculated using the CRONUS calculator for 36Cl.
DOI: 10.25387/g3.13238942
title: Supplemental Material for Lebo et al., 2020

description: Table S1 is a complete list of all Drosophila genes identified on Flybase (Thurmond et al. 2019) with the GO terms relating to kinase activity.<br>Table S2 is a complete listing of kinase gene fly lines, their genotypes, and phenotypes used in the study "An RNAi screen of the kinome in epithelial follicle cells of the <i>Drosophila melanogaster</i> ovary reveals genes required for proper germline death and clearance.". <br><br><br>
DOI: 10.25387/g3.13238942.v1
title: Supplemental Material for Lebo et al., 2020

description: Table S1 is a complete list of all Drosophila genes identified on Flybase (Thurmond et al. 2019) with the GO terms relating to kinase activity.<br>Table S2 is a complete listing of kinase gene fly lines, their genotypes, and phenotypes used in the study "An RNAi screen of the kinome in epithelial follicle cells of the <i>Drosophila melanogaster</i> ovary reveals genes required for proper germline death and clearance.". <br><br><br>
DOI: 10.6084/m9.figshare.13472316
title: Dagenais_Aegerter.zip

description: <b>18 columns:</b> surface (0 and 2 = left and right sides, 3 and 4 = dorsal and ventral sides, 5 = tip) A_index (longer axis on that specific side) B_index (smaller axis on that specific side) x y z Sa (stress in direction of axis A) Sb (stress in direction of axis B) Sn (normal stress) Smagn (magnitude of the stress) SaABS (Sa, averaged in absolute value) SbABS (Sb, averaged in absolute value) SnABS (Sn, averaged in absolute value) VISCn (contribution of viscous stress to Sn) Pn (contribution of pressure to Sn) U (x-component of velocity) V (y-component of velocity) W (z-component of velocity)
DOI: 10.6084/m9.figshare.13472316.v1
title: Dagenais_Aegerter.zip

description: <b>18 columns:</b> surface (0 and 2 = left and right sides, 3 and 4 = dorsal and ventral sides, 5 = tip) A_index (longer axis on that specific side) B_index (smaller axis on that specific side) x y z Sa (stress in direction of axis A) Sb (stress in direction of axis B) Sn (normal stress) Smagn (magnitude of the stress) SaABS (Sa, averaged in absolute value) SbABS (Sb, averaged in absolute value) SnABS (Sn, averaged in absolute value) VISCn (contribution of viscous stress to Sn) Pn (contribution of pressure to Sn) U (x-component of velocity) V (y-component of velocity) W (z-component of velocity)
DOI: 10.25345/c5wz1m
title: MassIVE MSV000086625 - Sec24 O-GlcNac mapping HCD/ETD Boyce Lab
title: Bottom up proteomic analysis of Sec24 to characterize GlcNac PTMs sites In gel tryptic digestion protoocl followed by LC-MS/MS. Briefly, each sample was subjected to chromatographic separation on a Waters NanoAquity UPLC equipped with a 1.7 um BEH130 C18 75 um I.D. x 250 mm reversed-phase column. The mobile phase consisted of (A) 0.1% formic acid in water and (B) 0.1% formic acid in acetonitrile. Following a 5 uL injection, peptides were trapped for 5 min on a 5 um Symmetry C18 180 um I.D. X 20 mm column at 20 ul/min in 99.9% A. The analytical column was held at 5% B for 5 min then switched in-line and a linear elution gradient of 5% B to 40% B was performed over 60 min at 300 nL/min. The analytical column was connected to a fused silica PicoTip emitter (New Objective, Cambridge, MA) with a 10 um tip orifice and coupled to a Fusion Lumos Orbitrap mass spectrometer through an electrospray interface. The instrument was set to acquire a precursor MS scan from m/z 350-1800 with r = 120,000 at m/z 400 and a target AGC setting of 4e5 ions. In a data-dependent mode of acquisition, MS/MS spectra were acquired at r = 15000 at m/z with a target AGC setting of 5e4 ions. Max fill times were set to 50 ms for full MS scans and 45 ms for MS/MS scans with minimum MS/MS triggering thresholds of 5000 counts. Neutral losses corresponding to loss of GlcNac were further supplemented to EThcD MS/MS scans at r=30,000 with agc target of 3e5 and max IT of 250 ms. For all experiments, a dynamic exclusion of 60 s was employed for previously fragmented precursor ions. Raw LC-MS/MS data files were processed in Mascot distiller (Matrix Science) and then submitted to independent Mascot database searches (Matrix Science) against SwissProt (homo sapien taxonomy) containing both forward and reverse entries of each protein. Search tolerances were 5 ppm for precursor ions and 0.02 Da for product ions using trypsin specificity with up to two missed cleavages. Carbamidomethylation (+57.0214 Da on C) was set as a fixed modification, whereas oxidation (+15.9949 Da on M) and OGlcNacylation (+203 Da on ST) were considered variable modifications. All searched spectra were imported into Scaffold (Proteome Software) and protein confidence thresholds were set using a Bayesian statistical algorithm based on the PeptideProphet and ProteinProphet algorithms which yielded a peptide and protein false discovery rate of 1%.
DOI: 10.6084/m9.figshare.13472259.v1
title: Collective action or individual choice

description: These data were obtained by Isabelle Steymans during her Bachellor Thesis at the University of Regensburg, at Björn Brembs' Laboratory, under the supervision of E. Axel Gorostiza
DOI: 10.25387/g3.13191527
title: Supplemental Material for Millington et al., 2020

description: All statistical tests and <i>p </i>values are listed in Supplementary file 1.<br>Raw values for all data collected and displayed in this manuscript are available in Supplementary file 2.
DOI: 10.25387/g3.13191527.v1
title: Supplemental Material for Millington et al., 2020

description: All statistical tests and <i>p </i>values are listed in Supplementary file 1.<br>Raw values for all data collected and displayed in this manuscript are available in Supplementary file 2.
DOI: 10.6080/k0s180qw
title: Simulated extracellular neural recordings, with white noise of physiologically relevant variance, and firing rates in the range of 0-100 Hz, generated using the action potential of a putative pyramidal neuron recorded from the primary motor cortex of an awake behaving rat
title: CRCNS.org sim-2

description: This is a simulated extracellular recording dataset that was generated using a real action potential waveform and analyzed in Okatan (2018a, 2018b). The method for generating these data was first explained and used in Okatan and Kocatürk (2017), where a narrower range of firing rates was considered. This is a resource (simulation), which could help analyze experimental neuroscience data in view of the fact that these data can contribute to the development of improved spike detection algorithms both for basic neuroscience research and for brain-computer interfaces. Okatan, M. and Kocatürk M. "Truncation thresholds: a pair of spike detection thresholds computed using truncated probability distributions", Turk J Elec Eng & Comp Sci., 25:1436-1447, 2017. doi:10.3906/elk-1603-33. Okatan, M. "A comparative study on the estimation of noise standard deviation using DATE and Truncation Thresholds." 2018 26th Signal Processing and Communications Applications Conference (SIU). IEEE, 2018a. Okatan, M. "Comparison of Truncation Thresholds with four different robust scale estimators." 2018 26th Signal Processing and Communications Applications Conference (SIU). IEEE, 2018b.
DOI: 10.5286/isis.e.rb1910332-5
title: Gathering Gemology and Glassmaking

description: A set of more than 1000 specimens of glass gems enriches the collection of the National Archaeological Museum of Aquileia (Italy), in many different colours and transparencies. Glass classification generally follows elemental composition as for major (silica), minor (soda, ashes or potash) and trace components (B, F, Ti, Fe, but also Sb and Sn elements). Therefore, deriving the composition could return useful criteria for dating, provenance, manufacturing and trading issues. In agreement with the Museum, 40 significant glass gems were selected by colours, style, and gemmological criteria. Aim of the study will be the determination of different colouring and opacifying agents as well as the glassy or crystalline phases. In details, we want to disclose in a non-destructive way: (i) elemental composition (by NRCA), and (ii) phase composition (by ToF-ND) of the opacifying agents.
DOI: 10.6084/m9.figshare.10325183
title: Taenzer_2019_GRL

description: Dataframes for Taenzer et al. 2019 GRL submission.Dataframe_01: Methane abundances from culture experiments.Dataframe_02: C isotope valuesSOM: materials and methods explanations and calculations.
DOI: 10.6084/m9.figshare.10325183.v1
title: Taenzer_2019_GRL

description: Dataframes for Taenzer et al. 2019 GRL submission.Dataframe_01: Methane abundances from culture experiments.Dataframe_02: C isotope valuesSOM: materials and methods explanations and calculations.
DOI: 10.5286/isis.e.rb2010546-2
title: Doped YAG nanoparticles: neutron diffraction to explain luminescent properties by the lattice features

description: Doped YAG is an important material with interesting technological applications in inorganic electroluminescence displays, X-ray scintillators, etc. In order to control the morphology and particle size of products, we modified the preparation methods by adding some additives (polymers, metals and glasses), thus improving the luminescent properties. Particularly, one of the most interesting and puzzling result is that, when dealing with nano-powders with the same particle size, we observed the same emission spectra but values of the quantum efficiency changing about twice. In addition to this, in some samples it was observed a small red shift of the emission band. The goal of this study is to investigate the lattice disorder and strain content of crystalline structure of cerium doped YAG nanoparticles obtained via modified urea glass route by combining Neutron and X-Ray Diffraction.
DOI: 10.5286/isis.e.rb2010546-3
title: Doped YAG nanoparticles: neutron diffraction to explain luminescent properties by the lattice features

description: Doped YAG is an important material with interesting technological applications in inorganic electroluminescence displays, X-ray scintillators, etc. In order to control the morphology and particle size of products, we modified the preparation methods by adding some additives (polymers, metals and glasses), thus improving the luminescent properties. Particularly, one of the most interesting and puzzling result is that, when dealing with nano-powders with the same particle size, we observed the same emission spectra but values of the quantum efficiency changing about twice. In addition to this, in some samples it was observed a small red shift of the emission band. The goal of this study is to investigate the lattice disorder and strain content of crystalline structure of cerium doped YAG nanoparticles obtained via modified urea glass route by combining Neutron and X-Ray Diffraction.
DOI: 10.5281/zenodo.4383118
title: SIR Model Fitting for COVID-19 Dataset

description: SIR Model for COVID-19 Dataset. The dataset is described in "Analytical parameter estimation of the SIR epidemic model. Applications to the COVID-19 pandemic" https://arxiv.org/abs/2010.07000 The primary data source is ECDC.
DOI: 10.5281/zenodo.4383117
title: SIR Model Fitting for COVID-19 Dataset

description: SIR Model for COVID-19 Dataset. The dataset is described in "Analytical parameter estimation of the SIR epidemic model. Applications to the COVID-19 pandemic" https://arxiv.org/abs/2010.07000 The primary data source is ECDC.
DOI: 10.5281/zenodo.4382347
title: Remcom Wireless InSite - Warehouse models and simulation configurations

description: This dataset is provided in scope of the SafeLog project. It comprises warehouse models and simulation configurations for Remcom Wireless InSite suite used in evaluating UWB signal propagation in warehouse environment.
DOI: 10.5281/zenodo.4382346
title: Remcom Wireless InSite - Warehouse models and simulation configurations

description: This dataset is provided in scope of the SafeLog project. It comprises warehouse models and simulation configurations for Remcom Wireless InSite suite used in evaluating UWB signal propagation in warehouse environment.
DOI: 10.6092/unibo/amsacta/6573
title: OLEUM project. Revised method for determination of fatty acid ethyl esters in virgin olive oils. Data from in-house validation

description: This data set contains the underlying data of the scientific publication: Palagano, R.; Valli, E.; Tura, M.; Cevoli, C.; Pérez-Camino, M.C.; Moreda, W.; Bendini, A.; Gallina Toschi, T. Fatty Acid Ethyl Esters in Virgin Olive Oils: In-House Validation of a Revised Method. Foods 2020, 9(7), 924; https://doi.org/10.3390/foods9070924. The content of fatty acid ethyl esters (FAEEs) is one of the quality parameters to define if an olive oil can be classified as extra virgin since these compounds are considered markers for virgin olive oils obtained from poor quality olives, but can be also indirect markers to detect soft deodorization treatment. The official protocol for determination (EU Reg. 61/2011) can be improved in terms of solvents amount and time of analysis. An off-line HPLC-GC-FID method for FAEEs determination was developed, revising both the preparative step and the GC injector required by the official method. After optimization, the method was in-house validated by analyzing several parameters (linearity, LOD, LOQ, robustness, recovery, precision and accuracy). This data set contains the in-house validation results obtained.