DOI: 10.15468/dl.3pfc7j
title: Occurrence Download

description: A dataset containing 5320 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 PRINTF('%04d-%02d', "year", "month") yearmonth,
 GBIF_EEARGCODE(10000, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 1000)) eeacellcode,
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, GBIF_EEARGCODE(10000, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 1000)), PRINTF('%04d-%02d', "year", "month"))) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, GBIF_EEARGCODE(10000, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 1000)), PRINTF('%04d-%02d', "year", "month"))) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, GBIF_EEARGCODE(10000, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 1000)), PRINTF('%04d-%02d', "year", "month"))) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, GBIF_EEARGCODE(10000, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 1000)), PRINTF('%04d-%02d', "year", "month"))) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, GBIF_EEARGCODE(10000, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 1000)), PRINTF('%04d-%02d', "year", "month"))) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, GBIF_EEARGCODE(10000, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 1000)), PRINTF('%04d-%02d', "year", "month"))) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.basisofrecord = 'MACHINE_OBSERVATION'
 AND occurrence.continent = 'EUROPE'
 AND occurrence.countrycode = 'SE'
 AND occurrence.gbifregion = 'EUROPE'
 AND (GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_OUT_OF_RANGE', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_ROUNDED', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'GEODETIC_DATUM_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'GEODETIC_DATUM_ASSUMED_WGS84', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_REPROJECTED', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_REPROJECTION_FAILED', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_REPROJECTION_SUSPICIOUS', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_ACCURACY_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_PRECISION_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_UNCERTAINTY_METERS_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COORDINATE_PRECISION_UNCERTAINTY_MISMATCH', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'FOOTPRINT_SRS_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'FOOTPRINT_WKT_MISMATCH', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'FOOTPRINT_WKT_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COUNTRY_COORDINATE_MISMATCH', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COUNTRY_MISMATCH', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COUNTRY_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COUNTRY_DERIVED_FROM_COORDINATES', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'CONTINENT_COORDINATE_MISMATCH', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'CONTINENT_COUNTRY_MISMATCH', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'CONTINENT_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'CONTINENT_DERIVED_FROM_COUNTRY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'CONTINENT_DERIVED_FROM_COORDINATES', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'PRESUMED_SWAPPED_COORDINATE', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'PRESUMED_NEGATED_LONGITUDE', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'PRESUMED_NEGATED_LATITUDE', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'RECORDED_DATE_MISMATCH', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'RECORDED_DATE_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'RECORDED_DATE_UNLIKELY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_HIGHERRANK', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_AGGREGATE', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_SCIENTIFIC_NAME_ID_IGNORED', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_TAXON_ID_IGNORED', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'SCIENTIFIC_NAME_ID_NOT_FOUND', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_CONCEPT_ID_NOT_FOUND', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_ID_NOT_FOUND', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'SCIENTIFIC_NAME_AND_ID_INCONSISTENT', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_NONE', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_NAME_AND_ID_AMBIGUOUS', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'DEPTH_NOT_METRIC', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'DEPTH_UNLIKELY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'DEPTH_MIN_MAX_SWAPPED', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'DEPTH_NON_NUMERIC', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'ELEVATION_UNLIKELY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'ELEVATION_MIN_MAX_SWAPPED', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'ELEVATION_NOT_METRIC', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'ELEVATION_NON_NUMERIC', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'MODIFIED_DATE_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'MODIFIED_DATE_UNLIKELY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'IDENTIFIED_DATE_UNLIKELY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'IDENTIFIED_DATE_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'BASIS_OF_RECORD_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TYPE_STATUS_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'MULTIMEDIA_DATE_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'MULTIMEDIA_URI_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'REFERENCES_URI_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'INTERPRETATION_ERROR', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'INDIVIDUAL_COUNT_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'INDIVIDUAL_COUNT_CONFLICTS_WITH_OCCURRENCE_STATUS', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'OCCURRENCE_STATUS_UNPARSABLE', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'OCCURRENCE_STATUS_INFERRED_FROM_INDIVIDUAL_COUNT', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'OCCURRENCE_STATUS_INFERRED_FROM_BASIS_OF_RECORD', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'GEOREFERENCED_DATE_UNLIKELY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'GEOREFERENCED_DATE_INVALID', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'AMBIGUOUS_INSTITUTION', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'AMBIGUOUS_COLLECTION', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'INSTITUTION_MATCH_NONE', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COLLECTION_MATCH_NONE', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'INSTITUTION_MATCH_FUZZY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'COLLECTION_MATCH_FUZZY', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'INSTITUTION_COLLECTION_MISMATCH', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'POSSIBLY_ON_LOAN', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'DIFFERENT_OWNER_INSTITUTION', TRUE) OR GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'ZERO_COORDINATE', TRUE))
 AND occurrence.license IN ('CC_BY_NC_4_0', 'CC_BY_4_0', 'CC0_1_0')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL AND occurrence."month" IS NOT NULL AND occurrence.hascoordinate = TRUE)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 PRINTF('%04d-%02d', "year", "month"),
 GBIF_EEARGCODE(10000, decimallatitude, decimallongitude, COALESCE(coordinateuncertaintyinmeters, 1000))

 The dataset's 5320 records were derived from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081649-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.