cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.831352
title: Effects of CO2 enrichment on photosynthesis, growth, and nitrogen metabolism of the seagrass Zostera noltii

description: Seagrass ecosystems are expected to benefit from the global increase in CO2 in the ocean because the photosynthetic rate of these plants may be Ci-limited at the current CO2 level. As well, it is expected that lower external pH will facilitate the nitrate uptake of seagrasses if nitrate is cotransported with H+ across the membrane as in terrestrial plants. Here, we investigate the effects of CO2 enrichment on both carbon and nitrogen metabolism of the seagrass Zostera noltii in a mesocosm experiment where plants were exposed for 5 months to two experimental CO2 concentrations (360 and 700 ppm). Both the maximum photosynthetic rate (Pm) and photosynthetic efficiency (a) were higher (1.3- and 4.1-fold, respectively) in plants exposed to CO2-enriched conditions. On the other hand, no significant effects of CO2 enrichment on leaf growth rates were observed, probably due to nitrogen limitation as revealed by the low nitrogen content of leaves. The leaf ammonium uptake rate and glutamine synthetase activity were not significantly affected by increased CO2 concentrations. On the other hand, the leaf nitrate uptake rate of plants exposed to CO2-enriched conditions was fourfold lower than the uptake of plants exposed to current CO2 level, suggesting that in the seagrass Z. noltii nitrate is not cotransported with H+ as in terrestrial plants. In contrast, the activity of nitrate reductase was threefold higher in plant leaves grown at high-CO2 concentrations. Our results suggest that the global effects of CO2 on seagrass production may be spatially heterogeneous and depend on the specific nitrogen availability of each system. Under a CO2 increase scenario, the natural levels of nutrients will probably become limiting for Z. noltii. This potential limitation becomes more relevant because the expected positive effect of CO2 increase on nitrate uptake rate was not confirmed.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-03-31.
description: Supplement to: Alexandre, Ana; Silva, João; Buapet, Pimchanok; Björk, Mats; Santos, Rui (2012): Effects of CO2 enrichment on photosynthesis, growth, and nitrogen metabolism of the seagrass Zostera noltii. Ecology and Evolution, 2(10), 2625-2635
DOI: 10.1594/pangaea.908180
title: Seawater carbonate chemistry and growth of four North Atlantic bivalves

description: To understand how Ulva species might respond to salinity stress during future ocean acidification we cultured a green tide alga Ulva linza at various salinities (control salinity, 30 PSU; medium salinity, 20 PSU; low salinity, 10 PSU) and CO2 concentrations (400 and 1000 ppmv) for over 30 days. The results showed that, under the low salinity conditions, the thalli could not complete its whole life cycle. The specific growth rate (SGR) of juvenile thalli decreased significantly with reduced salinity but increased with a rise in CO2. Compared to the control, medium salinity also decreased the SGR of adult thalli at low CO2 but did not affect it at high CO2. Similar patterns were also found in relative electron transport rate (rETR), non-photochemical quenching, saturating irradiance, and Chl b content. Although medium salinity reduced net photosynthetic rate and maximum rETR at each CO2 level, these negative effects were significantly alleviated at high CO2 levels. In addition, nitrate reductase activity was reduced by medium salinity but enhanced by high CO2. These findings indicate that future ocean acidification would enhance U. linza's tolerance to low salinity stress and may thus facilitate the occurrence of green tides dominated by U. linza.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-10-24.
description: Supplement to: Gao, Guang; Qu, Liming; Burgess, J Grant; Li, Xinshu; Xu, Juntian (2019): Future CO2-induced ocean acidification enhances resilience of a green tide alga to low-salinity stress. ICES Journal of Marine Science
DOI: 10.1594/pangaea.842713
title: Effects of ocean acidification on the calcification of otoliths of larval Atlantic cod Gadus morhua

description: The growth and development of the aragonitic CaCO3 otoliths of teleost fish could be vulnerable to processes resulting from ocean acidification. The potential effects of an increase in atmospheric CO2 on the calcification of the otoliths were investigated by rearing Atlantic cod Gadus morhua L. larvae in 3 pCO2 concentrations-control (370 µatm), medium (1800 µatm) and high (4200 µatm)-from March to May 2010. Increased otolith growth was observed in 7 to 46 d post hatch (dph) cod larvae at elevated pCO2 concentrations. The sagittae and lapilli were usually largest in the high pCO2 treatment followed by the medium and control treatments. The greatest difference in mean otolith surface area (normalized to fish length) was for sagittae at 11 dph, with medium and high treatments being 46 and 43% larger than the control group, respectively. There was no significant pCO2 effect on the shape of the otoliths nor were there any trends in the fluctuating asymmetry, defined as the difference between the right and left sides, in relation to the increase in otolith growth from elevated pCO2.
description: European Community's Seventh Framework Programme (FP7/ 2007-2013) under the Marie Curie Initial Training Network 'Calcification by Marine Organisms' (CalMarO)RTD project 'European Project on Ocean Acidification' (EPOCA), grant agreement (N211384)'Biological Impacts of Ocean ACIDification' (BIOACID), funded by the German Ministry for Education and Research (BMBF)In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010).
description: Supplement to: Maneja, Rommel H; Frommel, Andrea Y; Geffen, Audrey J; Folkvord, Arild; Piatkowski, Uwe; Chang, M Y; Clemmesen, Catriona (2013): Effects of ocean acidification on the calcification of otoliths of larval Atlantic cod Gadus morhua. Marine Ecology Progress Series, 477, 251-258
DOI: 10.1594/pangaea.901176
title: Seawater carbonate chemistry and settlement of a robust fouling bryozoan, Bugula neritina during acclimation experiment

description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-04-25.
DOI: 10.1594/pangaea.843730
title: Ocean acidification rapidly reduces dinitrogen fixation associated with the hermatypic coral Seriatopora hystrix

description: Since productivity and growth of coral-associated dinoflagellate algae is nitrogen (N)-limited, dinitrogen (N2) fixation by coral-associated microbes is likely crucial for maintaining the coral-dinoflagellate symbiosis. It is thus essential to understand the effects future climate change will have on N2 fixation by the coral holobiont. This laboratory study is the first to investigate short-term effects of ocean acidification on N2 fixation activity associated with the tropical, hermatypic coral Seriatopora hystrix using the acetylene reduction assay in combination with calcification measurements. Findings reveal that simulated ocean acidification ( pCO2 1080 µatm) caused a rapid and significant decrease (53%) in N2 fixation rates associated with S. hystrix compared to the present day scenario ( pCO2 486 µatm). In addition, N2 fixation associated with the coral holobiont showed a positive exponential relationship with its calcification rates. This suggests that even small declines in calcification rates of hermatypic corals under high CO2 conditions may result in decreased N2 fixation activity, since these 2 processes may compete for energy in the coral holobiont. Ultimately, an intensified N limitation in combination with a decline in skeletal growth may trigger a negative feedback loop on coral productivity exacerbating the negative long-term effects of ocean acidification.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
description: Supplement to: Rädecker, Nils; Meyer, Friedrich Wilhelm; Bednarz, Vanessa N; Cardini, Ulisse; Wild, Christian (2014): Ocean acidification rapidly reduces dinitrogen fixation associated with the hermatypic coral Seriatopora hystrix. Marine Ecology Progress Series, 511, 297-302
DOI: 10.1594/pangaea.875791
title: Seawater carbonate chemistry and leaf coloration, photophysiology and photosynthetic pigments of seagrass Zostera noltii

description: Seagrasses play an essential ecological role within coastal habitats and their worldwide population decline has been linked to different types of anthropogenic forces. We investigated, for the first time, the combined effects of future ocean warming and acidification on fundamental biological processes of Zostera noltii, including shoot density, leaf coloration, photophysiology (electron transport rate, ETR; maximum PSII quantum yield, Fv/Fm) and photosynthetic pigments. Shoot density was severely affected under warming conditions, with a concomitant increase in the frequency of brownish colored leaves (seagrass die-off). Warming was responsible for a significant decrease in ETR and Fv/Fm (particularly under control pH conditions), while promoting the highest ETR variability (among experimental treatments). Warming also elicited a significant increase in pheophytin and carotenoid levels, alongside an increase in carotenoid/chlorophyll ratio and De-Epoxidation State (DES). Acidification significantly affected photosynthetic pigments content (antheraxanthin, beta-carotene, violaxanthin and zeaxanthin), with a significant decrease being recorded under the warming scenario. No significant interaction between ocean acidification and warming was observed. Our findings suggest that future ocean warming will be a foremost determinant stressor influencing Z. noltii survival and physiological performance. Additionally, acidification conditions to occur in the future will be unable to counteract deleterious effects posed by ocean warming.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-05-26.
description: Supplement to: Repolho, Tiago; Duarte, Bernardo; Dionísio, Gisela; Paula, José Ricardo; Lopes, Ana R; Rosa, Inês C; Grilo, Tiago F; Cacador, Isabel; Calado, Ricardo; Rosa, Rui (2017): Seagrass ecophysiological performance under ocean warming and acidification. Scientific Reports, 7, 41443
DOI: 10.1594/pangaea.770096
title: Seawater carbonate chemistry and effective photochemical quantum yield, calcification, photosynthesis and UV inhibition of Emiliania huxleyi (CS-369) during experiments, 2011

description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
DOI: 10.1594/pangaea.835334
title: Ocean acidification affects growth but not nutritional quality of the seaweed Fucus vesiculosus (Phaeophyceae, Fucales)

description: Understanding the ecological implications of global climate change requires investigations of not only the direct effects of environmental change on species performance but also indirect effects that arise from altered species interactions. We performed CO2 perturbation experiments to investigate the effects of ocean acidification on the trophic interaction between the brown seaweed Fucus vesiculosus and the herbivorous isopod Idotea baltica. We predicted faster growth of F. vesiculosus at elevated CO2-concentrations and higher carbon content of the algal tissue. We expected that I. baltica has different consumption rates on algae that have been grown at different CO2 levels and that the isopods remove surplus carbon metabolically by enhanced respiration. Surprisingly, growth of F. vesiculosus as well as the C:N-ratio of the algal tissue were reduced at high CO2-levels. The changes in the elemental composition had no effect on the consumption rates and the respiration of the herbivores. An additional experiment showed that consumption of F. vesiculosus by the isopod Idotea emarginata was independent of ocean acidification and temperature. Our results could not reveal any effects of ocean acidification on the per capita strength of the trophic interaction between F. vesiculosus and its consumers. However, reduced growth of the algae at high CO2-concentrations might reduce the capability of the seaweed to compensate losses due to intense herbivory.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-08-28.
description: Supplement to: Gutow, Lars; Rahman, Mohammed Mofizur; Bartl, Kevin; Saborowski, Reinhard; Bartsch, Inka; Wiencke, Christian (2014): Ocean acidification affects growth but not nutritional quality of the seaweed Fucus vesiculosus (Phaeophyceae, Fucales). Journal of Experimental Marine Biology and Ecology, 453, 84-90
DOI: 10.1594/pangaea.890180
title: Seawater carbonate chemistry and Arctic phytoplankton blooms and dimethyl sulfide concentration

description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-05-23.
DOI: 10.1594/pangaea.846877
title: Decreased light availability can amplify negative impacts of ocean acidification on calcifying coral reef organisms

description: Coral reef organisms are increasingly and simultaneously affected by global and local stressors such as ocean acidification (OA) and reduced light availability. However, knowledge of the interplay between OA and light availability is scarce. We exposed 2 calcifying coral reef species (the scleractinian coral Acropora millepora and the green alga Halimeda opuntia) to combinations of ambient and increased pCO2 (427 and 1073 µatm, respectively), and 2 light intensities (35 and 150 µmol photons/m**2/s) for 16 d. We evaluated the individual and combined effects of these 2 stressors on weight increase, calcification rates, O2 fluxes and chlorophyll a content for the species investigated. Weight increase of A. millepora was significantly reduced by OA (48%) and low light intensity (96%) compared to controls. While OA did not affect coral calcification in the light, it decreased calcification in the dark by 155%, leading to dissolution of the skeleton. H. opuntia weight increase was not affected by OA, but decreased (40%) at low light. OA did not affect algae calcification in the light, but decreased calcification in the dark by 164%, leading to dissolution. Low light significantly reduced gross photosynthesis (56 and 57%), net photosynthesis (62 and 60%) and respiration (43 and 48%) of A. millepora and H. opuntia, respectively. In contrast to A. millepora, H. opuntia significantly increased chlorophyll content by 15% over the course of the experiment. No interactive effects of OA and low light intensity were found on any response variable for either organism. However, A. millepora exhibited additive effects of OA and low light, while H. opuntia was only affected by low light. Thus, this study suggests that negative effects of low light and OA are additive on corals, which may have implications for management of river discharge into coastal coral reefs.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2015-06-01.
description: Supplement to: Vogel, Nikolas; Meyer, Friedrich Wilhelm; Wild, Christian; Uthicke, Sven (2015): Decreased light availability can amplify negative impacts of ocean acidification on calcifying coral reef organisms. Marine Ecology Progress Series, 521, 49-61
DOI: 10.1594/pangaea.920872
title: Seawater carbonate chemistry and net community calcification, production and respiration of coral reef

description: Previous studies have found that calcification in coral reefs is generally stronger during the day, whereas dissolution is prevalent at night. On the basis of these contrasting patterns, the diel variations of net community calcification (NCC) were monitored to examine the relative sensitivity of CaCO3 production (calcification) and dissolution in coral reefs to ocean acidification (OA), using two mesocosms that replicated a typical subtropical coral reef ecosystem in southern Taiwan. The results revealed that the daytime NCC remained unchanged, whereas the nighttime NCC decreased between the control (ambient) and treatment (OA) conditions, suggesting that carbonate dissolution could be more sensitive to OA than coral calcification. The average sensitivity of the integrated daily NCC to changes in the seawater saturation state (Omega a) was estimated to be a reduction of 54% in NCC per unit change in Omega a, which is consistent with the global average. In summary, our results support the prevailing anticipation that OA would lead to a reduction in the overall accretion of coral reef ecosystems. However, increased CaCO3 dissolution rather than decreased coral calcification could be the dominant driving force responsible for this OA-induced reduction in NCC.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-07-07.
DOI: 10.1594/pangaea.860530
title: Temperature dependence of CO2-enhanced primary production in the European Arctic Ocean

description: The Arctic Ocean is warming at two to three times the global rate and is perceived to be a bellwether for ocean acidification. Increased CO2 concentrations are expected to have a fertilization effect on marine autotrophs, and higher temperatures should lead to increased rates of planktonic primary production. Yet, simultaneous assessment of warming and increased CO2 on primary production in the Arctic has not been conducted. Here we test the expectation that CO2-enhanced gross primary production (GPP) may be temperature dependent, using data from several oceanographic cruises and experiments from both spring and summer in the European sector of the Arctic Ocean. Results confirm that CO2 enhances GPP (by a factor of up to ten) over a range of 145-2,099 µatm; however, the greatest effects are observed only at lower temperatures and are constrained by nutrient and light availability to the spring period. The temperature dependence of CO2-enhanced primary production has significant implications for metabolic balance in a warmer, CO2-enriched Arctic Ocean in the future. In particular, it indicates that a twofold increase in primary production during the spring is likely in the Arctic.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-05-16.
description: Supplement to: Holding, Johnna; Duarte, Carlos Manuel; Sanz-Martín, Marina; Mesa, E; Arrieta, J M; Chierici, Melissa; Hendriks, Iris; García-Corral, Lara S; Regaudie-de-Gioux, Aurore; Delgado, A; Reigstad, Marit; Wassmann, P; Agustí, Susana (2015): Temperature dependence of CO2-enhanced primary production in the European Arctic Ocean. Nature Climate Change, 5(12), 1079-1082