cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26362852.v1
title: Transcribed list of Montserrat Government House Visitors 1934-7.xlsx

description: Transcribed list of visitors who signed in to the Government House, Montserrat, between 1933 and 1937. The original document is held in the Montserrat Public Library archives MPL 82-17.
DOI: 10.6084/m9.figshare.20022992.v2
title: RSP_lagoon

description: Monthly Chlorophyll-a data Monthly_averaged outputs from high-resolution simulation of a coastal model
DOI: 10.6084/m9.figshare.157108.v1
title: Slides - Vessel Archives - Existential Risk, Human Survival, and the Future of Life int he Universe - 100YSS 2012

description: Slides for the 100 Year Starship Symposium 2012 presentation: <strong>Vessel Archives - Existential Risk, Human Survival, and the Future of Life int he Universe</strong> <strong><br></strong> (No notes. See alternate for notes.)
DOI: 10.6084/m9.figshare.12179223.v2
title: Ultrastructural morphological features of the hair in a sexual signal: the dark ventral patch of male red deer

description: Chemical signals play a decisive role in communication in many mammal species. In male Iberian red deer, the dark ventral patch has been recently described as a sexual chemical signal involved in intrasexual competition. Morphological specializations of the hairs of this area might contribute to retaining the volatile compounds found here. In this study, we examined the differences in ultrastructure between hairs associated with the dark ventral patch and hairs from the dorsolateral region of the body as a reference. We obtained a gallery of images from a scanning electron microscope to study the possible variation in detail anatomy and the surface and pattern of cuticular scales of hairs of the two body regions examined. In addition, we used a 2D-3D microscope to measure hair diameter (thickness) and the shape and size of the cuticular scales. We found differences in the thickness of the hairs of the dark ventral patch, which were narrower than hairs from the dorsolateral region. We also evidenced a unique cuticular scale pattern of the dark ventral patch hairs, suggesting a possible specialization of the hairs for the retention of compounds associated with this chemical signal. Moreover, some inter-sexual differences in hair morphology also support this idea. This study shows, for the first time, the differentiation of hairs related to the dark ventral patch, which contributes to the understanding of this chemical communication of Iberian red deer.
DOI: 10.6084/m9.figshare.26510896.v1
title: STEM data - "Serotonergic modulation of swallowing in a complete fly vagus nerve connectome"

description: Primary data of Schoofs et al. 2024 “Serotonergic modulation of swallowing in a complete fly vagus nerve connectome”. Information about methodology and data can be obtained from the STAR Methods section.
DOI: 10.6084/m9.figshare.22683508.v1
title: Little_2023_among-sampler var in fuel moisture field measurements

description:  Data supporting the study " Accounting for among-sampler variability improves confidence in fuel moisture content field measurements" submitted to International Journal of Wildland Fire.
File contains:
- csv of fuel moisture measurement data collected during an intensive field campaign
DOI: 10.6084/m9.figshare.27617496.v1
title: Supplementary Table 1-6

description: Supplementary Table 1. The results of the three Mendelian randomization analyses on the influence of cheese intake on 249 metabolic traits before excluding outliers.Supplementary Table 2. The results of the three Mendelian randomization analyses on the influence of cheese intake on 249 metabolic traits after excluding outliers.Supplementary Table 3. The results of the three Mendelian randomization analyses on the influence of cheese intake on essential hypertension before excluding outliers.Supplementary Table 4. The results of the three Mendelian randomization analyses on the influence of cheese intake on essential hypertension after excluding outliers.Supplementary Table 5. The results of the three Mendelian randomization analyses on the influence of 249 metabolic traits on essential hypertension before excluding outliers.Supplementary Table 6. The results of the three Mendelian randomization analyses on the influence of 249 metabolic traits on essential hypertension after excluding outliers.
DOI: 10.6084/m9.figshare.6754880.v1
title: Shaw-et-al-Analysis.zip

description: Zipped archive allowing reproduction of the results in the associated paper, in which we fit different models of microbiome recovery to experimental data from individuals receiving antibiotics. <br>This archive contains all the analysis code (R and Stan); data files of reanalyzed datasets; and an Rmarkdown file (with associated cache) reproducing all main results figures in the paper. <br><br>N.B. The original experimental dataset was made available through Zaura et al. (2015) doi: 10.1128/mBio.01693-15. SRA accession: SRP057504.<br><br>
DOI: 10.6084/m9.figshare.17041586.v1
title: AppendixD_cmcv_difference.csv

description: Cmcv difference values for all 48 scenarios.
DOI: 10.6084/m9.figshare.21981047.v1
title: Supplemental Table S2

description: <strong>Article Title: </strong>A Leaky Human Colon Model Reveals Uncoupled Apical/Basal Cytotoxicity in Early <em>Clostridioides difficile</em> Toxin Exposure <strong>Journal</strong>: AJP-GI <strong>Supplemental Table S2. </strong>Bulk RNAseq data comparing gene expression after 20 hours of <em>C. difficile </em>1X (30 pM) TcdA exposure (group B) versus untreated controls (group A) in healthy human colonic epithelium
DOI: 10.6084/m9.figshare.25129247.v1
title: <b>A Ce-CuZn catalyst with abundant </b><b>Cu/Zn-O</b><sub><strong>V</strong></sub><b>-Ce</b><b> active sites for CO</b><sub><strong>2</strong></sub><b> hydrogenation to methanol</b>

description: CO<sub>2</sub> hydrogenation to chemicals and fuels is a significant approach for achieving carbon neutrality. It is essential to rationally design the chemical structure and catalytic active sites towards the development of efficient catalysts. Here we show a Ce-CuZn catalyst with enriched Cu/Zn-O<sub>V</sub>-Ce active sites fabricated through the atomic-level substitution of Cu and Zn into Ce-MOF precursor. The Ce-CuZn catalyst exhibits a high methanol selectivity of 71.1% and a space-time yield of methanol up to 400.3 g·kg<sub>cat</sub><sup>-1</sup>·h<sup>-1</sup> with excellent stability for 170 h at 260 °C, comparable to that of the state-of-the-art CuZnAl catalysts. Controlled experiments and DFT calculations confirm that the incorporation of Cu and Zn into CeO<sub>2</sub> with abundant oxygen vacancies can facilitate H<sub>2</sub> dissociation energetically and thus improve CO<sub>2</sub> hydrogenation over the Ce-CuZn catalyst via formate intermediates. This work offers an atomic-level design strategy for constructing efficient multi-metal catalysts for methanol synthesis through control of active sites.
DOI: 10.6084/m9.figshare.25684665.v1
title: Additional file 3 - datasets and scripts for performance analysis

description: All calculations and statistical analyses were performed using R (version 4.0.2). The data on ADG, feed intake, and body composition were analysed in R with linear mixed-effect models using the “lmer” function of the lme4 package. The category (IUGR, NORM) and sex (female, castrate) were considered fixed effects, and the litter of origin was considered a random effect. The two-way interaction between the two fixed effects was consistently assessed and removed if not significant. The pig was considered the experimental unit. Analysis of data regarding ADG was conducted individually for the lactation, starter, grower, and finisher periods. Data on feed intake were analysed separately for the grower and finisher periods. Analysis of body composition data was conducted separately at weaning, the beginning of the grower period, and the end of the finisher period.
DOI: 10.6084/m9.figshare.24442375.v2
title: Homestead_440

description: The data includes 15-minute gap-free observations of air temperature at 60 cm, air temperature at 2 m, air temperature at 10 m, soil temperature, relative humidity, precipitation, wind speed, wind direction, solar radiation, and dew point temperature from 2005-2020 at 30 stations across Florida. These stations are a part of the Florida Automated Weather Network (FAWN). <br> The data are provided in station-specific directories that contain files for every year. The metadata file contains descriptions of the stations, sensors, and meteorological variables. Detailed methodology used to generate this gap-free FAWN data is provided in the paper below: Peeling, J., Judge, J., Misra, V., Jayasankar, C. B. & Lusher, R. Gap-free 16-year (2005-2020)<br> sub-diurnal surface meteorological observations across Florida. arXiv e-prints arXiv:2310.16739<br> (2023). 2310.16739
DOI: 10.6084/m9.figshare.22493127.v1
title: Supplemental Table 2 - Survey Responses to demographic and career goals questions from The power of peer networking for improving STEM faculty job applications: a successful pilot programme

description: This table includes the anonymized responses to the demographic and all multiple choice survey questions. These data were used to generate figures 2-5 and 6.
DOI: 10.6084/m9.figshare.22527298.v1
title: Metadata

description: Metadata explaining the field codes for the 'data' used to support 'Landscape-scale benefits of protected areas for tropical biodiversity'
DOI: 10.6084/m9.figshare.25867735.v1
title: First in vivo images of the human brain revealed with the Iseult 11.7T MRI scanner

description: The first <i>in vivo</i> human images ever acquired at 11.7T show superb tissue contrast and mind-blowing details at ultra-high resolution not visible with 3T and 7T MRI scanners. The image dataset is available as a collection of nifti files.
DOI: 10.6084/m9.figshare.12722174.v3
title: Phase 3 Clinical Trial Data

description: This is a collection of phase 3 individual patient level data extracted from the Kaplan Meier curves for the primary endpoint(s) of the studies involving cancer treatments. Included along with the time to event data, are study level descriptives and performance measures which compare the reconstructed data points to the source material.
DOI: 10.6084/m9.figshare.5124274.v1
title: Supplementary Material for: Strategies for the Delivery of Multiple Collinear Infusion Clouds in Convection-Enhanced Delivery in the Treatment of Parkinson's Disease

description: <b><i>Background:</i></b> Delivery of multiple collinear payloads utilizing convection-enhanced delivery (CED) has historically been performed by retraction of a needle or catheter from the most distal delivery site. Few studies have addressed end-infusion morphology and associated payload reflux in stacked and collinear infusions, and studies comparing the advancement with the retraction mode are lacking. <b><i>Objective:</i></b> To compare advancement versus retraction mode infusion results. <b><i>Methods:</i></b> Infusion cloud pairs were created with the advancement and retraction technique in agarose gel using both open end-port SmartFlow™ (SF) and valve tip (VT) catheter infusion systems. Backflow, radius of infusion, and morphology were assessed. <b><i>Results:</i></b> Infusions with the SF catheter, in contrast to the VT catheter, exhibited significantly more backflow in retraction mode at the shallow infusion site. Infusion morphology differed with the second infusion after retraction: the infusate at the proximal site first filling the channel left by the retraction and then being convected into gel in a pronouncedly non-spherical shape during the second infusion. <b><i>Conclusions:</i></b> Significant differences in cloud morphology were noted with respect to external catheter geometry with retraction versus penetration between infusions in an agarose gel model of the brain. Further study is warranted to determine optimal protocols for human clinical trials employing CED with multiple collinear payloads.
DOI: 10.6084/m9.figshare.23715714.v1
title: OOD-GrainSet-maize

description: OOD-GrainSet-mazie for ECAI2023 (Identifying the Defective: Detecting Damaged Grains for Cereal Appearance Inspection) including 40K single-kernel images - 33K healthy kernel images - 7K images containing six types of damaged kernels and impurities, each type has 1k
DOI: 10.6084/m9.figshare.28428914.v1
title: Supplementary Material for: Conversion surgery after immune checkpoint inhibitor-based combination therapy for initially unresectable hepatocellular carcinoma: A retrospective cohort study

description: Introduction: Hepatocellular carcinoma (HCC) has a high incidence rate and is often asymptomatic in its early stages. Combination therapies using immune checkpoint inhibitors (ICIs) have demonstrated survival benefits and high objective response rates, offering hope for conversion surgery in patients with initially unresectable HCC. We aimed to investigate the oncological outcomes of conversion surgery compared to those with continuing systemic treatment alone in patients who responded well to ICIs-based therapy, as well as the surgical outcomes associated with conversion surgery.

Methods: We consecutively enrolled patients diagnosed with HCC between January 1, 2019 and February 1, 2024. These patients received treatment with ICIs combined with either anti-VEGF antibodies or tyrosine kinase inhibitors. Tumor response and resectability were assessed every 2 months. Patients who responded positively and met the criteria for conversion surgery were included. 

Results: Among 613 patients with initially unresectable HCC, 128 achieved conversion and met the surgical resection criteria during combination therapy. Of these, 54 continued non-surgical comprehensive treatment, 74 underwent conversion surgery, and 57 continued their original treatment post-surgery. The median follow-up time was 24.1 and 42.5 months for the surgery and non-surgery groups, respectively. The median PFS was 29.4 months in the surgery group versus 11.2 months in the non-surgery group (P&lt;0.0001, hazard ratio [HR]=0.39 [0.24–0.63]). The median OS was not reached in the surgery group, compared to 25.4 months in the non-surgery group (P&lt;0.0001, HR=0.26 [0.14–0.46]). Multivariate Cox regression analysis indicated that conversion surgery was independently associated with improved OS and PFS (P&lt;0.001), and continuing the original treatment post-surgery significantly influenced OS and recurrence -free survival.

Conclusion: Conversion surgery after meeting the surgical criteria during immunotherapy provides significant prognostic benefits for patients with initially unresectable HCC, demonstrating high safety and R0 resection rates. For those undergoing conversion surgery, promptly resuming the original treatment after surgery is necessary.
DOI: 10.6084/m9.figshare.25051292.v1
title: bias-corrected irrigated area dataset

description: We produce bias-corrected irrigated area (IA) dataset for the period 2000 to 2019, employing agricultural suitability (AS calculated using precipitation and potential evapotranspiration) information through a linear regression correction method, which ensures continuous spatiotemporal IA information at the county-level.The geodetic datum utilized by this dataset adheres to the EPSG:4326 coordinate reference system, commonly known as WGS-1984.
DOI: 10.6084/m9.figshare.14294051.v1
title: Datasets

description: Community Health Volunteers
DOI: 10.6084/m9.figshare.19733257.v1
title: GSE69405

description: 2 primary lung adenocarcinoma tumors from. patients.
DOI: 10.6084/m9.figshare.27646137.v2
title: Original data for the article 'River-lake ecosystems exhibit a strong seasonal cycle of greenhouse gas emissions'.

description: Original data for the article 'River-lake ecosystems exhibit a strong seasonal cycle of greenhouse gas emissions'.
DOI: 10.6084/m9.figshare.27895236.v1
title: Supplementary files

description: Supplementary tables
DOI: 10.6084/m9.figshare.16742098.v1
title: Site_frame

description: Experimental averages, management, and environmental data for every experiment, across all genotypes, including sites with missing lat/longs:<br>A flat csv including site-averaged phenotypes and unique experiment identifier (BOMDom_Trial_ID) that can used to like these data to imputed environmental data.<br><br>
DOI: 10.6084/m9.figshare.12162975.v2
title: GTT-1-protein-181.dcdWW domain trajectories

description: Trajectories of ww domainTrajectories dataTrajectories of WW domain
DOI: 10.6084/m9.figshare.29040788.v1
title: <b>Fatty acid analysis</b>

description: Collect cultured cells(1*10<sup>7</sup> cells per sample) into centrifuge tubes. After grinding and centrifugation of the cells, the supernatant was taken and vortexed with chloroform, centrifuged, and the lower layer liquid was taken and placed in a sample bottle. It was concentrated and dried, and dissolved in methanol.The cellular metabolites were dissolved in methanol using ultra high performance liquid chromatography ion mobility quadrupole time-of-flight mass spectrometer (Acquity I-class; Waters). Cell samples include PANC-1 and Capan-2 cells upon SCD knockdown or TGM2 knockdown. The experiment was conducted by Instrumental Analysis Center of Shanghai Jiao Tong University. The mobile phase A: Containing 0.1% formic acid water; mobile phase B: Containing 0.1% formic acid acetonitrile (1/1). The gradient was as follows: 95%A and 5%B (initial); 80%A and 20%B (5 min) ; 100%B (18 min); 95%A and 5%B (28 min) with a flow rate of 0.4ml/min in column BEH C18 1.7um，2.1*100mm, column temperature at 45℃. MS conditions were follows: the acquisition mode at MSE; ionization mode at ESI negative, capillary voltage at 2 KV (negative), cone voltage at 40 V, desolvation temperature at 450℃, desolvation gas at 900 L/h, cone gas at 50L/h, source temperature at 115℃, acquisition range at 50 to 1000 m/z, scan rate at 0.2 s, collision energy at 6 eV/20～45 eV; lockmass at 250 pg/μL of leucine enkephalin; flow rate at 10 μL/min; interval at 0.5 s; sample time at 0.5 s; collision energy at 6 eV. Data acquisition and analysis were carried out by Waters UNIFI 1.9.4. A series of FA samples is standard.
DOI: 10.6084/m9.figshare.16607306.v1
title: Turbulence detection experiments

description: This data contains the observation results of CDWL, LAS, and wind tower in the horizontal experiments in HeFei, results of CDWL and MWR in the vertical experiments in Xilin Gol Prairie.<br><br>The data is used in the paper: "Turbulence Detection in the Atmospheric Boundary Layer using Coherent Doppler Wind Lidar and Microwave Radiometer".
DOI: 10.6084/m9.figshare.14039820
title: Two-Stage Sort Planning for Express Parcel Delivery

description: The design and control of effective sortation systems have become more complex as both the volume of parcels and also the number of time-definite service options offered by parcel carriers have grown. In this paper, we describe approaches for planning two-stage parcel sort operations that explicitly consider time deadlines and sorting capacities. In two-stage sorting, parcels are sorted into groups by a primary sorter and then parcels from these groups are dispatched to secondary stations for final sort. We define a sort planning optimization problem in this setting using mixed-integer programming, where the primary objective is to minimize operational cost subject to machine capacity and parcel deadline constraints. Since a detailed optimization problem for sort planning based on flows in a time-space network is difficult to solve for realistically-sized instances, we develop an alternative formulation that is easier to solve and shares the same feasible region of first-stage sorting decisions with the detailed model; for many practical objective functions, this simpler model can be used to find cost-optimal solutions to the detailed model. We illustrate the proposed modeling approach and its effectiveness using real-world instances obtained from a large parcel express service provider.
DOI: 10.6084/m9.figshare.25970086.v1
title: Print Orientation Optimization Data

description: Datasets for print orientation optimization.
DOI: 10.6084/m9.figshare.816878.v1
title: FITC labeling of bacteria

description: Hey Cindy, Here is the protocol for preparation and imaging of bacteria for fluorescence microscopy (Growth Curve protocol--see Step 9 under Section II). I also attached a protocol for FITC labeling of bacteria, which you will need once you start the phagocytosis assays. I’m not emailing the phagocytosis protocol since we will probably need to develop a personalized protocol for your studies. K
DOI: 10.6084/m9.figshare.24313807.v1
title: Datasets for CO2 DA paper

description: A temporary repository for the HOMO and LUMO energies for the DA reaction of CO2.
DOI: 10.15468/dl.6mbcde
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leptoderma macrops Vaillant, 1886",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((8.2112 -0.773,8.9648 -2.2147,8.9648 1.4824,8.8631 1.3007,8.8278 -0.0747,8.2974 -0.3332,8.2112 -0.773))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013522-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.29043140.v1
title: <b>Code and Data for </b><b><i>"Quantifying Uncertainty in Geospatial Explanations from Explainable AI"</i></b>

description: <b>Code and Data for </b><b><i>"Quantifying Uncertainty in Geospatial Explanations from Explainable AI"</i></b>This repository contains the code and data used in our submitted work <i>“Quantifying Uncertainty in Geospatial Explanations from Explainable AI.”</i>In this study, we propose <b>GeoXCP</b>, a <b>model-agnostic framework</b> for quantifying uncertainty in geospatial explanations derived from explainable AI methods.We validate the effectiveness of GeoXCP through a case study on housing price prediction. The provided files are organized as follows:<br>📁<b> 1-model</b>Contains the core implementation of <b>GeoXCP</b>, including the following modules:GeoConformalGeoConformalizedExplainer<br>📁<b> 2-data_Housing_price</b>Includes the housing price dataset for Seattle:seattle_sample_3k.csv<br>📁<b> 3-codes_Housing_price</b>Contains code used for applying GeoXCP to the housing price prediction task:SeattleHomeSaleUncertaintyGeoX.ipynb: End-to-end implementation for uncertainty quantification using GeoXCP. All results from the main experiment can be reproduced here.seattle_house_price_coverage_bootstrap.ipynb: Demonstrates how GeoXCP achieves reliable coverage through bootstrap-based validation.<br>
DOI: 10.6084/m9.figshare.8321168.v4
title: Supporting information - The impact of political knowledge, cognitive load, decision-making strategies, and gender on correct voting

description: - Dataset from an experimental study on correct voting (includes both the experiment dataset and parties dataset based on which mock parties were formed)- R script used for analysis- Parties statements - details on each mock party- Examples of strategies employed by participants