cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48324/dandi.000129/0.241017.1444
title: MC_RTT: macaque motor cortex spiking activity during self-paced reaching

description: This dataset contains sorted unit spiking times and behavioral data from a macaque performing a self-paced reaching task. In the experimental task, the subject reached between targets randomly selected from an 8x8 grid without gaps or pre-movement delay intervals. Neural activity was recorded from an electrode array implanted in the primary motor cortex. Finger position, cursor position, and target position were also recorded during the experiment. Provided as part of the Neural Latents Benchmark: https://neurallatents.github.io.
DOI: 10.48324/dandi.000130/0.220113.0407
title: DMFC_RSG: macaque dorsomedial frontal cortex spiking activity during time interval reproduction task

description: This dataset contains sorted unit spiking times from a macaque performing a time-interval reproduction task. In the experimental task, the monkey was presented with two stimuli separated by a specific interval of time. The monkey then attempted to time their response such that the interval between the second stimulus and their response matched the interval separating the two stimuli. Neural activity was recorded from neural probes implanted in the dorsomedial frontal cortex. Provided as part of the Neural Latents Benchmark: https://neurallatents.github.io.
DOI: 10.48324/dandi.000138/0.220113.0407
title: MC_Maze_Large: macaque primary motor and dorsal premotor cortex spiking activity during delayed reaching

description: This dataset contains sorted unit spiking times and behavioral data from a macaque performing a delayed reaching task. The experimental task was a center-out reaching task with obstructing barriers forming a maze, resulting in a variety of straight and curved reaches. Neural activity was recorded from electrode arrays implanted in the motor cortex (M1) and dorsal premotor cortex (PMd). Cursor position, hand position, and eye position were also recorded during the experiment, and hand velocity was calculated offline from hand position. The provided data has been limited to 500 train trials and 100 test trials. Provided as part of the Neural Latents Benchmark: https://neurallatents.github.io.
DOI: 10.48324/dandi.000139/0.220113.0408
title: MC_Maze_Medium: macaque primary motor and dorsal premotor cortex spiking activity during delayed reaching

description: This dataset contains sorted unit spiking times and behavioral data from a macaque performing a delayed reaching task. The experimental task was a center-out reaching task with obstructing barriers forming a maze, resulting in a variety of straight and curved reaches. Neural activity was recorded from electrode arrays implanted in the motor cortex (M1) and dorsal premotor cortex (PMd). Cursor position, hand position, and eye position were also recorded during the experiment, and hand velocity was calculated offline from hand position. The provided data has been limited to 250 train trials and 100 test trials. Provided as part of the Neural Latents Benchmark: https://neurallatents.github.io.
DOI: 10.48324/dandi.000140/0.220113.0408
title: MC_Maze_Small: macaque primary motor and dorsal premotor cortex spiking activity during delayed reaching

description: This dataset contains sorted unit spiking times and behavioral data from a macaque performing a delayed reaching task. The experimental task was a center-out reaching task with obstructing barriers forming a maze, resulting in a variety of straight and curved reaches. Neural activity was recorded from electrode arrays implanted in the motor cortex (M1) and dorsal premotor cortex (PMd). Cursor position, hand position, and eye position were also recorded during the experiment, and hand velocity was calculated offline from hand position. The provided data has been limited to 100 train trials and 100 test trials. Provided as part of the Neural Latents Benchmark: https://neurallatents.github.io.
DOI: 10.48436/5042s-tkt46
title: Numerical data for "Origin of the anomalous Hall effect in Cr-doped RuO2"

description: This dataset contains the numerical data accompanying the "Origin of the anomalous Hall effect in Cr-doped RuO2" paper.Computations were performed using VASP 6.3.0, and the postprocessing necessary to obtain the band structures was done using the vaspkit package.The Data directory contains the necessary input files to reproduce the computations and the output files produced by the computations.The Plots directory contains the data and gnuplot scripts used to plot figures presented in the paper:



Fig. 1: energies and weighted average of local magnetic moments of various magnetic phases of Cr-doped RuO2 in the VCA approximation

Fig. 2: the absolute value of total magnetic moment with corresponding energy and local magnetic moment for a set of supercells of RuO2 with 20% Cr doping

Fig. 3: magnetic moment distribution for the two lowest-energy structures

Fig. 4: effective Curie-Weiss moments from Ref. [14] compared to a Cr-only model and anomalous Hall conductivity measured in Ref. [14] and its derivative with respect to the magnetic moment

Fig. 5: band-structure plots for the lowest-energy structure among the set of studied supercells


To produce the figure one simply runs plot.sh script in the respective directory: the script will use gnuplot and pdflatex to produce the plots.The data necessary to produce plots can be collected using the get.sh or get_data.sh scripts.In the case of VASP computations, the total energy is reported in the OUTCAR file at the line containing the free  energy   TOTEN  =  token, the local magnetization in the block after the magnetization token, and the total magnetic moment in the OSZICAR file at the line containing the mag=token. The input parameters are specified in the INCAR file and the k-grid mesh in KPOINTS file. The pseudopotentials should be obtained from the VASP distribution and saved as a single file, named POTCAR.

The following POTCARs were used for VASP calculations:md5sum                            name and locationb5c924befef4a180481bb6f65e4e516d  potpaw_LDA.54/Ru_pv/POTCAR6bfe8c9fc881319367b05c52d7f764ba  potpaw_LDA.54/Cr_pv/POTCARdd29215744b63de40827d7952527f753  potpaw_LDA.54/POTCAR

Licenses

The data is licensed under CC-BY, the code (scripts) are licensed under MIT.
DOI: 10.5067/aura/omi/data3006
title: OMI/Aura Surface Reflectance Climatology Level 3 Global 0.5deg Lat/Lon Grid
DOI: 10.5281/zenodo.10907551
title: catalogs

description: Catalogs of events from shear granular materials. Format :

frame number ; barycenter coordinate x ; barycenter coordinate x ; area of the event ; ln(correlation)

file catalog_0.25ums.txt frame rate 5fps, compression velocity: 0.25 microns/s

file catalog_2ums.txt frame rate 40fps, compression velocity: 2 microns/s
DOI: 10.5281/zenodo.12735420
title: Dataset for "Quantifying the Role of Electron Plateau Distribution on the Chorus Gap Formation Using One-dimension PIC Simulations" [Dataset]

description: Dataset for figures in the paper
DOI: 10.5281/zenodo.12798598
title: Data for "DanceQ: High-performance library for number conserving bases" [arXiv:2407.14591]

description: Data set and python code to create all figures of the publication

DanceQ: High-performance library for number conserving basesRobin Schäfer, David J. Luitz

arXiv:2407.14591

https://arxiv.org/abs/2407.14591
DOI: 10.5281/zenodo.13177444
title: waveform data of the Empirical Green's Functions (EGFs)  and earthquakes for the manuscript "Unraveling the Mantle Dynamics in Central Asia with Full Waveform Inversion Tomography"

description: The dataset uploaded contains the original ASDF files and the SAC files (with '_sac') converted from ASDF

For the ASDF files:

The ASDF data file could be read through python module pyasdf and obspy after decompressing. 

The earthquake information could be accessed by the following command

import pyasdf

ds=pyasdf.ASDFDataSet(ASDFfile, mode='r')

event=ds.events[0].preferred_origin()

print(event)

the waveforms coul dbe accessed through

stream=ds.waveforms[net.station].raw_recording
DOI: 10.5281/zenodo.13741368
title: Turbulence and winds based on Doppler lidar collected at Xiaomai Island, Qingdao, Shandong, China, from October 2021 to April 2023.

description: This dataset presents gust and turbulence parameters collected with Doppler lidar. The data were collected from October 2021 to April 2023 at Xiaomai Island, Qingdao, Shandong, China. The parameters include 10-minute average wind speed, peak gust, gust factor, gust amplitude, turbulence intensity, turbulent kinetic energy, friction velocity, drag coefficient, roughness length and energy flux.
DOI: 10.5281/zenodo.14610830
title: Data for "Constraining the Acetone Photolysis Quantum Yield"

description: Contained are the data used in the analyses and figures for "Constraining the Acetone Photolysis Quantum Yield: Current Insighs and Atmospheric Chemistry Implications" by Link, et al. (2025).
DOI: 10.5281/zenodo.14703647
title: Ozone and other key fields (2018-2024) over the northeastern and mid-Atlantic US modeled by WRF-Chem, relevant to the TOAR-II activity

description: This dataset includes input and output from a coupled regional modeling system (NASA-Unified Weather Research and Forecasting model with online Chemistry, WRF-Chem) over the northeastern and mid-Atlantic US during May-June-July (MJJ) of 2018, 2019, 2020, 2022, 2023, and 2024. 

Specifically:

1) "ModelGrid.nc" includes model grid definition, grouped grid-dominant land use/cover type and irrigation fraction information 

2) "ozone_YYYY_MM.nc" files include hourly surface ozone concentrations

3) "NO2_YYYY_MM.nc" files include daily daytime-average and 19UTC surface nitrogen dioxide concentrations

4) "flux_allyears.nc" includes cumulative stomatal ozone uptake and mean total Nr deposition for all years' MJJ

All data are stored in NetCDF files. This dataset has been used in an article "Reactive nitrogen in and around the northeastern and Mid-Atlantic US: sources, sinks, and connections with ozone" in "Atmospheric Chemistry and Physics" by Huang et al. (2025), and "The Expanding Satellite Observing System Assists with Assessing the Role of Agricultural Land as Receptors and Sources of Air Pollution", presented at the 2024 American Geophysical Union Annual Meeting in Washington, DC, USA.
DOI: 10.5281/zenodo.14769761
title: MC_Cycle: macaque motor cortex spiking activity during cycling

description: This dataset contains sorted spike times from neural recordings (two 96-electrode Utah arrays) in motor cortex (M1 and PMd) while a monkey performed a cycling task to navigate a virtual environment. On each trial, the monkey grasped a hand-pedal and moved it cyclically forward or backward to navigate the virtual environment. The color of the virtual landscape cued the monkey as to whether forward or backward cycling would advance their location in the virtual environment. Cycling distance was cued by a virtual target that appeared a fixed distance away in the virtual environment. The number of complete cycles of pedaling required to reach the target was either 1, 2, 4, or 7 cycles. Between the two cycling directions and four cycling distances, there were a total of 8 conditions. The behavioral data for this dataset includes: pedal phase, angular velocity of the pedal, x- and y- pedal position, x- and y- pedal velocity, and 7 intramuscular EMG recordings. More information on the task can be found in Schroeder et al. 2022.

This dataset has been released as a supplement to Perkins et al. 2025. Contact the authors if guidance on the dataset is needed.
DOI: 10.5281/zenodo.14769889
title: MC_PacMan: macaque motor cortex spiking activity during isometric force production

description: This dataset contains sorted spike times from neural recordings (128 electrodes recorded simultaneously from a passive pre-production version of the Neuropixels 1.0-NHP probe) in motor cortex while a monkey generated forward isometric force against an immovable handle. The monkey was presented with a PacMan icon on a screen. PacMan’s vertical position corresponded to the force applied to the handle. A path of scrolling dots moved horizontally across the screen and the monkey was rewarded when PacMan intercepted the dots. The pattern of scrolling dots was used to cue various dynamic force profiles. The task contained eight conditions that all spanned approximately the same range of forces: four ramping force profiles (fast and slow, ascending and descending), three sinusoidal force profiles (0.25 Hz, 1 Hz, 3 Hz), and a chirp profile in which the frequency steadily increased throughout the trial from 0-3 Hz. More information on the task can be found in Marshall et al. 2022.

This dataset has been released as a supplement to Perkins et al. 2025. Contact the authors if guidance on the dataset is needed.
DOI: 10.5281/zenodo.2620547
title: DustCOMM_v1 Input Dataset

description: This repository contains the input data for  Dust Constraints from joint Observational-Modelling-experiMental analysis – DustCOMM Version 1.

The DustCOMM code is publicly available at http://doi.org/10.5281/zenodo.2620556, while the DustCOMM output dataset is similarly available at http://doi.org/10.5281/zenodo.2620475

Below, we give a brief description of each file:

1.  model_dust_concentration          -- Simulated 3-D dust concentration (ug/m3) from 6 model simulations. This folder contains both annually-averaged and seasonally-averaged model simulations.<br>
2.  model_dust_Vweight                -- 3-D model dust vertical weight used in DustCOME. This is calculated from the modeled dust concentration. This folder contains both annually-averaged and seasonally-averaged model simulations.<br>
3.  DAOD_clim_reanalysis_all.nc       -- Constrained annually-averaged dust aerosol optical depth. See Adebiyi et al. Geoscientific Model Development for details<br>
4.  DAOD_seas_reanalysis_all.nc       -- Constrained seasonally-averaged dust aerosol optical depth. See Adebiyi et al. Geoscientific Model Development for details<br>
5.  DustCOMM_lat.nc                   -- Latitude array used in DustCOMM. Dimension = 96.<br>
6.  DustCOMM_lon.nc                   -- Longitude array used in DustCOMM. Dimension = 144.<br>
7.  DustCOMM_lev.nc                   -- Altitude (hPa) array used in DustCOMM. Dimension = 48.<br>
8.  Globally_averaged_dust_PSD.mat    -- Constrained Globally-averaged dust size distribution from Kok et al, Nature Geoscience, 2017.<br>
9.  Size_resolved_ext_eff.mat         -- Constrained Globally-averaged dust extinction efficiency from Kok et al, Nature Geoscience, 2017.

If you have any question, please email the aadebiyi@ucla.edu.
DOI: 10.5281/zenodo.3475120
title: Benefit-cost analysis of adaptation objectives to coastal flooding at the global scale

description: This dataset presents results of benefit-cost analyses of different adaptation objectives using grey infrastructure to coastal flooding at the global scale. The four adaptation objectives are: (1) ‘Protection constant’, which keeps protection levels in the future the same as current protection levels; (2) ‘Absolute risk constant’, which calculates future protection standards when the absolute value for expected annual damage is kept the same as current; (3) ‘Relative risk constant’, which calculates future protection standards when expected annual damage as a percentage of GDP is kept the same as current; and (4) ‘Optimize’, which calculates future protection standards by maximizing net present value. The results for each adaptation objective include future protection standards, change in risk relative to GDP, benefit-cost ratio and net present value for various RCP-SSP combinations for sub-national regions.
DOI: 10.5281/zenodo.4267810
title: Management and plant physiology data for grassland sites in Germany

description: Management and vegetation data for sites Fendt (DE-Fen), Rottenbuch (DE-RbW) and Graswang (DE-Gwg) in Southern Germany, observed between 2012 and 2017. Weekly resolution vegetation traits are included for 2015. The sites are part of TERENO, a network of observatories in Germany. The time period includes the ScaleX intensive observation campaigns that took place in 2015 and 2016. The data format is NetCDF4. A Jupyter notebook is available (see Related identifiers, GitLab) with technical notes and examples.
DOI: 10.5281/zenodo.4267887
title: Meteorology, environment and surface flux data for grassland sites in Germany

description: Observation and model data for locations Fendt (DE-Fen), Rottenbuch (DE-RbW) and Graswang (DE-Gwg), in conjunction with selected journal publications. These data have primarily been used for investigation of surface carbon fluxes (Net Ecosystem Exchange, Gross Primary Productivity), seasonal climatic trends and land management. The sites are part of TERENO, a network of observatories in Germany. The TERENO Data Portal should provide other and more up-to-date information. The time period includes the ScaleX intensive observation campaigns that took place in 2015 and 2016. The data format is NetCDF4. A Jupyter notebook is available (see Related identifiers, GitLab) with technical notes and examples.
DOI: 10.5281/zenodo.8158727
title: Organic Matter Database (OMD)

description: Agricultural, fisheries, forestry and agro-processing activities produce large quantities of residues, by-products and waste materials every year. However, data on such residues and by-products are not readily available. We present a global organic matter database (OMD) of residues and by-products from agriculture, fisheries, forestry and related industries. The OMD is the first of its kind consolidating quantities of residues and by-products from agriculture, fisheries, forestry and allied industries globally. Residue datasets were estimated from the FAOSTAT and FishStatJ databases using prescribed equations and conversion factors.
description: The various files contain residue estimates by country, crop or animal species and year
DOI: 10.58020/h754-eg50
title: Modification of Diet in Renal Disease

description: The Modification of Diet in Renal Disease (MDRD) study consisted of two randomized clinical trials that investigated whether protein restriction and control of blood pressure had an effect on the progression of chronic kidney disease (CKD). The study tested two hypotheses—that (1) a reduction in dietary protein and phosphorous intake and (2) the maintenance of blood pressure at a level below that usually recommended safely and effectively delays the progression of CKD.
 
In study 1, 585 patients with glomerular filtration rates (GFR) of 25-55 ml/min/1.73 m<sup>2</sup> of body-surface area were randomly assigned to a usual-protein diet or a low-protein diet (1.3 or 0.58 g of protein per kilogram of body weight per day) and to a usual- or a low-blood-pressure group (mean arterial pressure, 107 or 92 mm Hg). In study 2, 255 patients with GFR of 13 to 24 ml/min/1.73 m<sup>2</sup> were randomly assigned to the low-protein diet (0.58 g per kilogram per day) or a very-low-protein diet (0.28 g per kilogram per day) with a keto acid-amino acid supplement, and a usual- or a low-blood-pressure group (same values as those in study 1). The length of follow-up varied from 18-to-45-months, with monthly evaluations of the patients. The primary outcome was the change in GFR rate over time. The study found that among patients with moderate renal insufficiency, the slower decline in renal function that started four months after the introduction of a low-protein diet suggests a small benefit of this dietary intervention. Among patients with more severe renal insufficiency, a very-low-protein diet, as compared with a low-protein diet, did not significantly slow the progression of renal disease.
DOI: 10.6084/m9.figshare.28128635
title: Supplementary Material for: Peripheral Retinal Ischemia and Secondary Neovascular Glaucoma after Cerclage for Retinal Detachment: A Case Report

description: Introduction: Various surgical techniques, including 360 degree buckling surgery with a retinal cerclage, have been employed to achieve retinal reattachment. Although retinal cerclage is generally effective, long-term complications can arise. Peripheral retinal ischemia and secondary neovascular glaucoma are rare but serious complications that can occur even years after successful retinal reattachment⁴.
Case Presentation: We present the case of a 79-year-old woman who underwent 360 degree buckling surgery with a cerclage for retinal detachment a decade ago, presenting with severe peripheral retinal ischemia and elevated intraocular pressure (IOP). Despite successful retinal reattachment post-cerclage, the patient experienced a late complication with peripheral retinal ischemia and secondary neovascular glaucoma.
Conclusion: Early detection and prompt management of such complications are crucial to prevent irreversible visual impairment.
DOI: 10.6084/m9.figshare.28183757
title: The optical spectrum data with highest SMSR.csv

description: The optical spectrum data with highest SMSR at 700mA.
DOI: 10.6084/m9.figshare.28269395.v2
title: Relationship between purposeful rumination and post-traumatic growth of college students who experienced childhood trauma: a regulated intermediary model

description: The purpose of this study is to explore the relationship between positive coping and post-traumatic growth in trauma experiencers, as well as the mediating role of positive coping and the moderating role of social comprehension support. Methods: In this study, 811 college students aged 18-28 who had traumatic experience were selected through the Traumatic Events Lifelong Experience Questionnaire as the research subjects, and the survey covered many provinces in China, and the purpose rumination scale, post-traumatic growth and positive coping scale and social comprehension rating scale were used for investigation. Results: Correlation analysis showed that purposive rumination, positive coping and post-traumatic growth were significantly correlated. Regression analysis showed that purposive rumination had a significant direct effect on post-traumatic growth (β=0.148, P&lt;0.001) . The results of the mediated moderation model showed that positive coping and social comprehension support played a chain mediating role in the relationship between purposive rumination and post-traumatic growth, and social comprehension support played a moderating role in the relationship between positive coping and post-traumatic growth. Furthermore, the simple slope analysis showed that the predictive effect of purposive rumination on PTG was not significant when the perceived social support was high, and the positive predictive effect of purposive rumination on PTG was significant when the perceived social support was low, indicating that the predictive effect of purposive rumination on PTG gradually increased with the decrease of perceived social support