cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8960903
title: Sfps sequences and primers from Interspecies comparison of sea star adhesive proteins.

description: Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called ‘footprints’. In the common sea star species <i>Asterias rubens</i>, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In <i>A. rubens</i>, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species.This article is part of the theme issue ‘Transdisciplinary approaches to the study of adhesion and adhesives in biological systems’.
DOI: 10.6084/m9.figshare.8960909
title: Sfp1 sequences from Interspecies comparison of sea star adhesive proteins.

description: Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called ‘footprints’. In the common sea star species <i>Asterias rubens</i>, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In <i>A. rubens</i>, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species.This article is part of the theme issue ‘Transdisciplinary approaches to the study of adhesion and adhesives in biological systems’.
DOI: 10.6084/m9.figshare.8960903.v2
title: Sfps sequences and primers from Interspecies comparison of sea star adhesive proteins.

description: Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called ‘footprints’. In the common sea star species <i>Asterias rubens</i>, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In <i>A. rubens</i>, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species.This article is part of the theme issue ‘Transdisciplinary approaches to the study of adhesion and adhesives in biological systems’.
DOI: 10.6084/m9.figshare.8960909.v2
title: Sfp1 sequences from Interspecies comparison of sea star adhesive proteins.

description: Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called ‘footprints’. In the common sea star species <i>Asterias rubens</i>, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In <i>A. rubens</i>, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species.This article is part of the theme issue ‘Transdisciplinary approaches to the study of adhesion and adhesives in biological systems’.
DOI: 10.6084/m9.figshare.8960903.v1
title: Sfps sequences and primers from Interspecies comparison of sea star adhesive proteins

description: Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called ‘footprints’. In the common sea star species <i>Asterias rubens</i>, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In <i>A. rubens</i>, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species.This article is part of the theme issue ‘Transdisciplinary approaches to the study of adhesion and adhesives in biological systems’.
DOI: 10.6084/m9.figshare.8960909.v1
title: Sfp1 sequences from Interspecies comparison of sea star adhesive proteins

description: Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called ‘footprints’. In the common sea star species <i>Asterias rubens</i>, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In <i>A. rubens</i>, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species.This article is part of the theme issue ‘Transdisciplinary approaches to the study of adhesion and adhesives in biological systems’.
DOI: 10.6084/m9.figshare.8960906
title: Staining results from Interspecies comparison of sea star adhesive proteins.

description: Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called ‘footprints’. In the common sea star species <i>Asterias rubens</i>, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In <i>A. rubens</i>, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species.This article is part of the theme issue ‘Transdisciplinary approaches to the study of adhesion and adhesives in biological systems’.
DOI: 10.6084/m9.figshare.8960906.v2
title: Staining results from Interspecies comparison of sea star adhesive proteins.

description: Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called ‘footprints’. In the common sea star species <i>Asterias rubens</i>, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In <i>A. rubens</i>, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species.This article is part of the theme issue ‘Transdisciplinary approaches to the study of adhesion and adhesives in biological systems’.
DOI: 10.6084/m9.figshare.8960906.v1
title: Staining results from Interspecies comparison of sea star adhesive proteins

description: Sea stars use adhesive secretions to attach their numerous tube feet strongly and temporarily to diverse surfaces. After detachment of the tube feet, the adhesive material stays bound to the substrate as so-called ‘footprints’. In the common sea star species <i>Asterias rubens</i>, the adhesive material has been studied extensively and the first sea star footprint protein (Sfp1) has been characterized. We identified Sfp1-like sequences in 17 additional sea star species, representing different taxa and tube foot morphologies, and analysed the evolutionary conservation of this protein. In <i>A. rubens</i>, we confirmed the expression of 34 footprint proteins in the tube foot adhesive epidermis, with 22 being exclusively expressed in secretory cells of the adhesive epidermis and 12 showing an additional expression in the stem epidermis. The sequences were used for BLAST searches in seven asteroid transcriptomes providing a first insight in the conservation of footprint proteins among sea stars. Our results highlighted a high conservation of the large proteins making up the structural core of the footprints, whereas smaller, potential surface-binding proteins might be more variable among sea star species.This article is part of the theme issue ‘Transdisciplinary approaches to the study of adhesion and adhesives in biological systems’.
DOI: 10.6084/m9.figshare.8964476
title: Data from Experimentally flight-impaired females show higher levels of extra-pair paternity in the pied flycatcher <i>Ficedula hypoleuca</i>.

description: Main data file
DOI: 10.6084/m9.figshare.8964476.v2
title: Data from Experimentally flight-impaired females show higher levels of extra-pair paternity in the pied flycatcher <i>Ficedula hypoleuca</i>.

description: Main data file
DOI: 10.6084/m9.figshare.8964476.v1
title: Data from Experimentally flight-impaired females show higher levels of extra-pair paternity in the pied flycatcher <i>Ficedula hypoleuca</i>

description: Main data file
DOI: 10.6084/m9.figshare.9120038
title: The dataset supporting this article from Stable isotopes reveal winter feeding in different habitats in blue, fin and sei whales migrating through the Azores.

description: Table S1. δ15N and δ13C values in the skin and faeces of blue, fin and sei whales sampled in the Azores.
DOI: 10.6084/m9.figshare.9120038.v2
title: The dataset supporting this article from Stable isotopes reveal winter feeding in different habitats in blue, fin and sei whales migrating through the Azores.

description: Table S1. δ15N and δ13C values in the skin and faeces of blue, fin and sei whales sampled in the Azores.
DOI: 10.6084/m9.figshare.9120038.v1
title: The dataset supporting this article from Stable isotopes reveal winter feeding in different habitats in blue, fin and sei whales migrating through the Azores

description: Table S1. δ15N and δ13C values in the skin and faeces of blue, fin and sei whales sampled in the Azores.
DOI: 10.6084/m9.figshare.9205229
title: Dataset from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Fully anonymized dataset used in the study.
DOI: 10.6084/m9.figshare.9205223
title: Fitting script from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Script to fit PSA data in whole dataset.
DOI: 10.6084/m9.figshare.9205229.v2
title: Dataset from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Fully anonymized dataset used in the study.
DOI: 10.6084/m9.figshare.9205223.v2
title: Fitting script from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Script to fit PSA data in whole dataset.
DOI: 10.6084/m9.figshare.9205226
title: PSA function for periodic dose model from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: PSA function for periodic dose model required for the nonlinear least-squares method.
DOI: 10.6084/m9.figshare.9205214
title: Statistical analysis script from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Script for statistical analysis of fitting results.
DOI: 10.6084/m9.figshare.9205229.v1
title: Dataset from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome

description: Fully anonymized dataset used in the study.
DOI: 10.6084/m9.figshare.9205223.v1
title: Fitting script from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome

description: Script to fit PSA data in whole dataset.
DOI: 10.6084/m9.figshare.9205211
title: Fitting script subroutine from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Fitting script for one PSA series.
DOI: 10.6084/m9.figshare.9205208
title: PSA function for single dose model from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: PSA function for single dose model required for the nonlinear least-squares method.
DOI: 10.6084/m9.figshare.9205226.v2
title: PSA function for periodic dose model from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: PSA function for periodic dose model required for the nonlinear least-squares method.
DOI: 10.6084/m9.figshare.9205214.v2
title: Statistical analysis script from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Script for statistical analysis of fitting results.
DOI: 10.6084/m9.figshare.9205217
title: ROC curve script from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Script to build ROC curves.
DOI: 10.6084/m9.figshare.9205226.v1
title: PSA function for periodic dose model from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome

description: PSA function for periodic dose model required for the nonlinear least-squares method.
DOI: 10.6084/m9.figshare.9205211.v2
title: Fitting script subroutine from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Fitting script for one PSA series.
DOI: 10.6084/m9.figshare.9205211.v1
title: Fitting script subroutine from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome

description: Fitting script for one PSA series.
DOI: 10.6084/m9.figshare.9205214.v1
title: Statistical analysis script from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome

description: Script for statistical analysis of fitting results.
DOI: 10.6084/m9.figshare.9205208.v1
title: PSA function for single dose model from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome

description: PSA function for single dose model required for the nonlinear least-squares method.
DOI: 10.6084/m9.figshare.9205217.v2
title: ROC curve script from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome.

description: Script to build ROC curves.
DOI: 10.6084/m9.figshare.9205217.v1
title: ROC curve script from Mechanistic modelling of prostate-specific antigen dynamics shows potential for personalized prediction of radiation therapy outcome

description: Script to build ROC curves.
DOI: 10.6084/m9.figshare.9247808
title: Supplementary data 2 from Type X strains of <i>Toxoplasma gondii</i> are virulent for southern sea otters (<i>Enhydra lutris nereis)</i> and present in felids from nearby watersheds.

description: Detailed genotyping results categorized by RFLP and MLST for Toxoplasma gondii isolates obtained from southern sea otter (N=135)
DOI: 10.6084/m9.figshare.9247811
title: Data S1 from Type X strains of <i>Toxoplasma gondii</i> are virulent for southern sea otters (<i>Enhydra lutris nereis)</i> and present in felids from nearby watersheds.

description: Molecular characterization results for assessing genetic diversity of Toxoplasma gondii isolates (N=29)
DOI: 10.6084/m9.figshare.9247808.v2
title: Supplementary data 2 from Type X strains of <i>Toxoplasma gondii</i> are virulent for southern sea otters (<i>Enhydra lutris nereis)</i> and present in felids from nearby watersheds.

description: Detailed genotyping results categorized by RFLP and MLST for Toxoplasma gondii isolates obtained from southern sea otter (N=135)
DOI: 10.6084/m9.figshare.9247808.v1
title: Supplementary data 2 from Type X strains of <i>Toxoplasma gondii</i> are virulent for southern sea otters (<i>Enhydra lutris nereis)</i> and present in felids from nearby watersheds

description: Detailed genotyping results categorized by RFLP and MLST for Toxoplasma gondii isolates obtained from southern sea otter (N=135)
DOI: 10.6084/m9.figshare.9247811.v2
title: Data S1 from Type X strains of <i>Toxoplasma gondii</i> are virulent for southern sea otters (<i>Enhydra lutris nereis)</i> and present in felids from nearby watersheds.

description: Molecular characterization results for assessing genetic diversity of Toxoplasma gondii isolates (N=29)
DOI: 10.6084/m9.figshare.9247811.v1
title: Data S1 from Type X strains of <i>Toxoplasma gondii</i> are virulent for southern sea otters (<i>Enhydra lutris nereis)</i> and present in felids from nearby watersheds

description: Molecular characterization results for assessing genetic diversity of Toxoplasma gondii isolates (N=29)
DOI: 10.6084/m9.figshare.9462353
title: Dataset S5 from Early integration of pastoralism and millet cultivation in Bronze Age Eurasia.

description: δ<sup>13</sup>C<sub>col</sub> and δ<sup>15</sup>N<sub>col</sub> values and radiocarbon dates of humans from the IAMC and wider steppe region
DOI: 10.6084/m9.figshare.9462347
title: Dataset S4 from Early integration of pastoralism and millet cultivation in Bronze Age Eurasia.

description: δ<sup>13</sup>C<sub>col</sub> and δ<sup>15</sup>N<sub>col</sub> values from samples of bone collagen from domesticated and wild herbivores and humans, including modern steppe tortoise
DOI: 10.6084/m9.figshare.9462353.v2
title: Dataset S5 from Early integration of pastoralism and millet cultivation in Bronze Age Eurasia.

description: δ<sup>13</sup>C<sub>col</sub> and δ<sup>15</sup>N<sub>col</sub> values and radiocarbon dates of humans from the IAMC and wider steppe region
DOI: 10.6084/m9.figshare.9462353.v1
title: Dataset S5 from Early integration of pastoralism and millet cultivation in Bronze Age Eurasia

description: δ<sup>13</sup>C<sub>col</sub> and δ<sup>15</sup>N<sub>col</sub> values and radiocarbon dates of humans from the IAMC and wider steppe region
DOI: 10.6084/m9.figshare.9462356
title: Dataset S3 from Early integration of pastoralism and millet cultivation in Bronze Age Eurasia.

description: δ<sup>13</sup>C<sub>apa</sub> and δ<sup>18</sup>O<sub>apa</sub> values and incremental distances of tooth enamel samples from domesticated and wild herbivores
DOI: 10.6084/m9.figshare.9462341
title: Dataset S2 from Early integration of pastoralism and millet cultivation in Bronze Age Eurasia.

description: δ<sup>13</sup>C values of broomcorn millet leaves and reference taxa displayed in Fig. 3, including corrections used to account for Suess effect for modern samples and trophic level enrichment between dietary sources and tissues