cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/v5rdmj2jb3.1
title: Raw Data

description: we report on that astragaloside IV attenuates hypoxia-induced cardiac hypertrophy via calpain-1-mediated mTOR activation. This is significant because our findings could be applied in the clinic for that astragaloside IV is effective against hypoxia-induced cardiac hypertrophy, apoptosis and autophagy, it is likely to be of great interest to the clinicians. Astragaloside IV (AsIV), one of the main active ingredients of Astragalus membranaceus, has been reported to have cardioprotective effects. However, the effect and mechanism of AsIV on hypoxia-induced myocardial hypertrophy are unclear. The aim of this study was to evaluate the effect of AsIV on hypoxia-induced cardiac injury by focusing on calpain-1 (CAPN1)-mediated mTOR activation. Hypoxia-induced cardiac hypertrophy was carried out in CAPN1 knockout and wild-type C57BL/6 mice in vivo and in H9C2 cells in vitro. The effects of AsIV, CAPN1 inhibition and 3-MA on hypertrophy, apoptosis, autophagy, [Ca2+]i, and the expression levels of CAPN1 and mTOR were assayed in cardiac tissue and H9C2 cells. The results showed that AsIV, as well as CAPN1 knockout, attenuated cardiac hypertrophy, apoptosis, and autophagy induced by hypoxia in mice, effects that were confirmed at the H9C2 cell level. In addition, AsIV treatment, CAPN1 inhibition and 3-MA increased p-mTOR expression and decreased [Ca2+]i, accompanied by decreased CAPN1 expression. Furthermore, H9C2 cells overexpressing CAPN1 with lentivirus infection aggravated hypoxia-induced myocardial hypertrophy, apoptosis, and p-mTOR inhibition. Notably, the effects of CAPN1 overexpression on cardiac injury and p-mTOR inhibition were reversed by AsIV treatment. In summary, our data indicated that AsIV could ameliorate hypoxia-induced cardiac hypertrophy by inhibiting apoptosis and autophagy via CAPN1-mediated mTOR activation.
DOI: 10.17632/v5rdmj2jb3.2
title: Raw Data

description: we report on that astragaloside IV attenuates hypoxia-induced cardiac hypertrophy via calpain-1-mediated mTOR activation. This is significant because our findings could be applied in the clinic for that astragaloside IV is effective against hypoxia-induced cardiac hypertrophy, apoptosis and autophagy, it is likely to be of great interest to the clinicians. Astragaloside IV (AsIV), one of the main active ingredients of Astragalus membranaceus, has been reported to have cardioprotective effects. However, the effect and mechanism of AsIV on hypoxia-induced myocardial hypertrophy are unclear. The aim of this study was to evaluate the effect of AsIV on hypoxia-induced cardiac injury by focusing on calpain-1 (CAPN1)-mediated mTOR activation. Hypoxia-induced cardiac hypertrophy was carried out in CAPN1 knockout and wild-type C57BL/6 mice in vivo and in H9C2 cells in vitro. The effects of AsIV, CAPN1 inhibition and 3-MA on hypertrophy, apoptosis, autophagy, [Ca2+]i, and the expression levels of CAPN1 and mTOR were assayed in cardiac tissue and H9C2 cells. The results showed that AsIV, as well as CAPN1 knockout, attenuated cardiac hypertrophy, apoptosis, and autophagy induced by hypoxia in mice, effects that were confirmed at the H9C2 cell level. In addition, AsIV treatment, CAPN1 inhibition and 3-MA increased p-mTOR expression and decreased [Ca2+]i, accompanied by decreased CAPN1 expression. Furthermore, H9C2 cells overexpressing CAPN1 with lentivirus infection aggravated hypoxia-induced myocardial hypertrophy, apoptosis, and p-mTOR inhibition. Notably, the effects of CAPN1 overexpression on cardiac injury and p-mTOR inhibition were reversed by AsIV treatment. In summary, our data indicated that AsIV could ameliorate hypoxia-induced cardiac hypertrophy by inhibiting apoptosis and autophagy via CAPN1-mediated mTOR activation.
DOI: 10.17632/3wzygvbhv4.1
title: Sample photos and description of rocks and sediments from petit-spots in the northwestern Pacific

description: We present sample photos of rock and sediment samples from petit-spots and their description. The samples were collected using deep-submergence vehicle (DSV) Shinkai 6500 and its mother ship, research vessel (RV) Yokosuka during YK20-14S and YK21-07S cruises. The rock samples are basalt and peperite, a reaction product between magma and wet sediment. They at times include mantle xenoliths. The cruises were designed to elucidate modification process of the surface condition and deep lithospheric mantle of the old Pacific plate just before its subduction beneath the Japan arc.
DOI: 10.17632/3wzygvbhv4.2
title: Sample photos and description of rocks and sediments from petit-spots in the northwestern Pacific

description: We present sample photos of rock and sediment samples from petit-spots and their description. The samples were collected using deep-submergence vehicle (DSV) Shinkai 6500 and its mother ship, research vessel (RV) Yokosuka during YK20-14S and YK21-07S cruises. The rock samples are basalt and peperite, a reaction product between magma and wet sediment. They at times include mantle xenoliths. The cruises were designed to elucidate modification process of the surface condition and deep lithospheric mantle of the old Pacific plate just before its subduction beneath the Japan arc.
DOI: 10.17632/3wzygvbhv4.3
title: Sample photos and description of rocks and sediments from petit-spots in the northwestern Pacific

description: We present sample photos of rock and sediment samples from petit-spots and their description. The samples were collected using deep-submergence vehicle (DSV) Shinkai 6500 and its mother ship, research vessel (RV) Yokosuka during YK20-14S and YK21-07S cruises. The rock samples are basalt and peperite, a reaction product between magma and wet sediment. They at times include mantle xenoliths. The cruises were designed to elucidate modification process of the surface condition and deep lithospheric mantle of the old Pacific plate just before its subduction beneath the Japan arc.
DOI: 10.17632/rnczk4dc49.1
title: Overview of the Problems and Solutions Presented in the Virtual Math Competition 2021

description: The Virtual Math Competition also well-know as "Competencia Virtual de Matemáticas (CVM)" is an academic event in Honduras that aims to reward the existing mathematical talent in the country as a way to motivate them to continue in the process of academic training. In this database are presented all the exams that the students answered during the development of "CVM - 2021" as well as the versions of the exams in Spanish, English, Miskito, Tol Jicaque, Ch'orti' and Taushiro.
DOI: 10.17632/ktkfhbvhkf.1
title: The practical utility of psychometric scales 

description: This study focuses on the evaluation of the internalization of different scares and how best to predict the impact of a scare on the well being of the patient.
This study was done in collaboration between the researchers from the University of Medicine and Pharmacy from Oradea and from the University of Medicine and Pharmacy "Victor Babes" Timisoara.
DOI: 10.17632/ntgv68vd7k.1
title: Central American and Caribbean Chemistry Olympiad 2021

description: This dataset contains the exams that were applied in the Central American and Caribbean Chemistry Olympiad 2021 held in the city of San Jose, Costa Rica, with the participation of four Central American countries (Honduras, Guatemala, El Salvador and Costa Rica). These exams can be used as research instruments in studies related to chemistry education. In addition, students' answers are not reported because most of the countries involved consider these data to be sensitive.
DOI: 10.17632/wwxdg9x8z6.1
title: Vulvar Leukemia Cutis: A case report and review of the literature

description: SUPPLEMENTAL FIGURE LEGEND
Supplemental Figure 1: Several months prior to her presentation for the vulvar lesion, the patient presented with an intensely pruritic, oval plaque with central ulceration and surrounding induration. It was initially suspected to be a bullous allergic contact dermatitis or arthropod reaction given the epidermal necrosis and superficial and deep T-cell infiltrate with eosinophils noted on histology.
DOI: 10.17632/684596y5sp.1
title: Supplementary Table 1A and 1B

description: Suplementary Table 1A. Laboratory methods and devices of thyroid function tests (TSH (thyroid-stimulating hormone), free thyroxine (FT4), free triiodothyronine (FT3)], thyroid autoantibodies (anti-thyroglobulin (Anti-Tg) and anti-thyroid peroxidase (Anti-TPO)] and Anti TSH antibody

Suplementary Table 1B. Laboratory methods and devices of C-reactive protein (CRP), Erythrocyte sedimentation rate (ESR) and white blood cell (WBC) count.
DOI: 10.17632/8rggrmjgpv.1
title: Supplementary Table 2

description: Suplementary Table 2. Comparison of pre-COVID-19 classical SAT and COVID-19 period classical SAT in terms of hypothyroidism and recurrence
DOI: 10.17632/fyybnjkw7v.2
title: Synthetic (DeepFake) Knee Osteoarthritis X-ray Images from Generative Adversarial Neural Networks

description: This dataset contains three archives of images; The archive named '320K DeepFake KOA Images' contains 320,000 DeepFake (synthetic) x-ray images generated with the method described in the reference article. The remaining archives, 'KNN Model Validation' and 'Survey Items' include the images used to perform the corresponding tasks in the reference article.
DOI: 10.17632/fyybnjkw7v.3
title: Synthetic (DeepFake) Knee Osteoarthritis X-ray Images from Generative Adversarial Neural Networks

description: This dataset contains three archives of images; The archive named '320K DeepFake KOA Images' contains 320,000 DeepFake (synthetic) x-ray images generated with the method described in the reference article. The remaining archives, 'KNN Model Validation' and 'Survey Items' include the images used to perform the corresponding tasks in the reference article.
DOI: 10.17632/646k8yzwj9.1
title: species_habitat_models_4_urban_devs

description: Hello, 

Here are the data & code to reproduce outputs reported in Cooper et al., 2022: Using species-habitat models to predict bird counts from urban development plans.
The uploaded data includes GIS maps of each development for each scenario & code to reproduce the predictions figures & tables reported in the paper. 
The models are based upon Plummer et al., 2020. For data relating to the models, please see https://doi.org/10.1111/1365-2664.13703.
The code & shapefiles to convert developments into model metrics are substantial in size and require licensed Land Cover Map 2007 & OS MasterMap 2010. 
Please contact joe.cooper@bto.org if this is required. 

scen is a folder seperating all 6 scenario dataset (baseline & 5 manipulations). 
Scenario_List.xlsx contains the manipulations applied to the baseline to produce the scenarios. 

Each folder contains:

a zip folder containing the shapefile of all developments
devdets.Rdata which gives the raw metrics for the developments  
urbandf.Rdata which gives the normalised metrics for the development relative to the wider dataset used in Plummer et al 2020

Models.Rdata = The models used in Plummer et al., 2020
Plummer2020_JApplEcol_data.RData = The dataframe of covariates used in Plummer et al., 2020 to produce those models
predictions_code.Rdata = script to assess urbandf in a loop to produce the outputs, figures & tables reported. 
20_rebuild_new_developments.R = The code used to turn shapefiles of a development merged with LCM & OSMM into the input metrics for the model
DOI: 10.17632/d4hf2hjjxr.1
title: Comparison of the effects of Therapeutic Exercise with either an Educational Booklet or Vitamin-D3 Supplement in the Management of Chronic Low Back Pain: Study Protocol for an Assessor Blinded Multicenter Randomized Clinical Trial 

description: the dataset contains the extended data for the protocol titled "Comparison of the effects of Therapeutic Exercise with either an Educational Booklet or Vitamin-D3 Supplement in the Management of Chronic Low Back Pain: Study Protocol for an Assessor Blinded Multicenter Randomized Clinical Trial"
DOI: 10.6084/m9.figshare.19448219.v3
title: The China Plant Trait Database Version 2.0

description: Here we present version 2.0 of the China Plant Trait Database, which contains information on morphometric, physical, chemical, photosynthetic and hydraulic traits from 1529 unique species in 140 sites spanning a diversity of vegetation types. Version 2 has five improvements compared to the previous version: (1) new data from a 4-km elevation transect on the edge of Tibetan Plateau, including alpine vegetation types not sampled previously; (2) inclusion of traits related to hydraulic processes, including specific sapwood conductance, the area ratio of sapwood to leaf, wood density and leaf turgor loss point; (3) inclusion of information on soil properties to complement the existing data on climate and vegetation (4) assessments of the reliability of individual trait measurements; and (5) inclusion of standardized checklists and templates for systematical field sampling and measurements. <br>
DOI: 10.5281/zenodo.7262140
title: MicroBooNE BNB Electron Neutrino Overlay Sample (With Wire Info)

description: MicroBooNE samples are provided for collaborative development in two different formats: HDF5, targeting the broadest audience, and artroot, targeting users that are familiar with the software infrastructure of Fermilab neutrino experiments and more in general of HEP experiments. The HDF5 files are stored on Zenodo, together with a list of artroot files accessible with xrootd. This sample includes simulated interactions of neutrinos from the Booster Neutrino Beam (BNB), overlaid on top of cosmic ray data. The sample is restricted to charged-current electron neutrino interactions within the argon active volume of the time projection chamber. The HDF5 files in this sample include the information at the wire waveform level (after deconvolution and finding of regions of interest). As this information significantly increases the file size, this sample contains about 20% of the events of the corresponding sample without wire information. More documentation, including detailed description of content, recipes, and example usage, at https://github.com/uboone/OpenSamples. Suggested text for acknowledgment is the following:<br> <em>We acknowledge the MicroBooNE Collaboration for making publicly available the data sets [data set DOIs] employed in this work. These data sets consist of simulated neutrino interactions from the Booster Neutrino Beamline overlaid on top of cosmic data collected with the MicroBooNE detector [2017 JINST 12 P02017].</em> In addition, we request that software products resulting from the usage of the datasets are also made publicly available.
description: This data set was prepared by the MicroBooNE collaboration using the resources of the Fermi National Accelerator Laboratory (Fermilab), a U.S. Department of Energy, Office of Science, HEP User Facility. Fermilab is managed by Fermi Research Alliance, LLC (FRA), acting under Contract No. DE-AC02-07CH11359. MicroBooNE is supported by the following: the U.S. Department of Energy, Office of Science, Offices of High Energy Physics and Nuclear Physics; the U.S. National Science Foundation; the Swiss National Science Foundation; the Science and Technology Facilities Council (STFC), part of the United Kingdom Research and Innovation; the Royal Society (United Kingdom); and the UK Research and Innovation (UKRI) Future Leaders Fellowship. Additional support for the laser calibration system and cosmic ray tagger was provided by the Albert Einstein Center for Fundamental Physics, Bern, Switzerland. We also acknowledge the contributions of technical and scientific staff to the design, construction, and operation of the MicroBooNE detector as well as the contributions of past collaborators to the development of MicroBooNE analyses, without whom this work would not have been possible. For the purpose of open access, the authors have applied a Creative Commons Attribution (CC BY) public copyright license to this submission.
DOI: 10.5281/zenodo.7262139
title: MicroBooNE BNB Electron Neutrino Overlay Sample (With Wire Info)

description: MicroBooNE samples are provided for collaborative development in two different formats: HDF5, targeting the broadest audience, and artroot, targeting users that are familiar with the software infrastructure of Fermilab neutrino experiments and more in general of HEP experiments. The HDF5 files are stored on Zenodo, together with a list of artroot files accessible with xrootd. This sample includes simulated interactions of neutrinos from the Booster Neutrino Beam (BNB), overlaid on top of cosmic ray data. The sample is restricted to charged-current electron neutrino interactions within the argon active volume of the time projection chamber. The HDF5 files in this sample include the information at the wire waveform level (after deconvolution and finding of regions of interest). As this information significantly increases the file size, this sample contains about 20% of the events of the corresponding sample without wire information. More documentation, including detailed description of content, recipes, and example usage, at https://github.com/uboone/OpenSamples. Suggested text for acknowledgment is the following:<br> <em>We acknowledge the MicroBooNE Collaboration for making publicly available the data sets [data set DOIs] employed in this work. These data sets consist of simulated neutrino interactions from the Booster Neutrino Beamline overlaid on top of cosmic data collected with the MicroBooNE detector [2017 JINST 12 P02017].</em> In addition, we request that software products resulting from the usage of the datasets are also made publicly available.
description: This data set was prepared by the MicroBooNE collaboration using the resources of the Fermi National Accelerator Laboratory (Fermilab), a U.S. Department of Energy, Office of Science, HEP User Facility. Fermilab is managed by Fermi Research Alliance, LLC (FRA), acting under Contract No. DE-AC02-07CH11359. MicroBooNE is supported by the following: the U.S. Department of Energy, Office of Science, Offices of High Energy Physics and Nuclear Physics; the U.S. National Science Foundation; the Swiss National Science Foundation; the Science and Technology Facilities Council (STFC), part of the United Kingdom Research and Innovation; the Royal Society (United Kingdom); and the UK Research and Innovation (UKRI) Future Leaders Fellowship. Additional support for the laser calibration system and cosmic ray tagger was provided by the Albert Einstein Center for Fundamental Physics, Bern, Switzerland. We also acknowledge the contributions of technical and scientific staff to the design, construction, and operation of the MicroBooNE detector as well as the contributions of past collaborators to the development of MicroBooNE analyses, without whom this work would not have been possible. For the purpose of open access, the authors have applied a Creative Commons Attribution (CC BY) public copyright license to this submission.
DOI: 10.5281/zenodo.7262009
title: MicroBooNE BNB Inclusive Overlay Sample (With Wire Info)

description: MicroBooNE samples are provided for collaborative development in two different formats: HDF5, targeting the broadest audience, and artroot, targeting users that are familiar with the software infrastructure of Fermilab neutrino experiments and more in general of HEP experiments. The HDF5 files are stored on Zenodo, together with a list of artroot files accessible with xrootd. This sample includes simulated interactions of neutrinos from the Booster Neutrino Beam (BNB), overlaid on top of cosmic ray data. The sample is inclusive, i.e. it includes all types of neutrinos and interactions, with relative abundance matching our nominal flux and cross section models. Interactions are simulated in in the whole cryostat volume. The HDF5 files in this sample include the information at the wire waveform level (after deconvolution and finding of regions of interest). As this information significantly increases the file size, this sample contains about 17% of the events of the corresponding sample without wire information. More documentation, including detailed description of content, recipes, and example usage, at https://github.com/uboone/OpenSamples. Suggested text for acknowledgment is the following:<br> <em>We acknowledge the MicroBooNE Collaboration for making publicly available the data sets [data set DOIs] employed in this work. These data sets consist of simulated neutrino interactions from the Booster Neutrino Beamline overlaid on top of cosmic data collected with the MicroBooNE detector [2017 JINST 12 P02017].</em> In addition, we request that software products resulting from the usage of the datasets are also made publicly available.
description: This data set was prepared by the MicroBooNE collaboration using the resources of the Fermi National Accelerator Laboratory (Fermilab), a U.S. Department of Energy, Office of Science, HEP User Facility. Fermilab is managed by Fermi Research Alliance, LLC (FRA), acting under Contract No. DE-AC02-07CH11359. MicroBooNE is supported by the following: the U.S. Department of Energy, Office of Science, Offices of High Energy Physics and Nuclear Physics; the U.S. National Science Foundation; the Swiss National Science Foundation; the Science and Technology Facilities Council (STFC), part of the United Kingdom Research and Innovation; the Royal Society (United Kingdom); and the UK Research and Innovation (UKRI) Future Leaders Fellowship. Additional support for the laser calibration system and cosmic ray tagger was provided by the Albert Einstein Center for Fundamental Physics, Bern, Switzerland. We also acknowledge the contributions of technical and scientific staff to the design, construction, and operation of the MicroBooNE detector as well as the contributions of past collaborators to the development of MicroBooNE analyses, without whom this work would not have been possible. For the purpose of open access, the authors have applied a Creative Commons Attribution (CC BY) public copyright license to this submission.