cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/xsdn-cx54
title: Hängstli pollen dataset

description: Raw data for the Hängstli pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.qp6zs3
title: Occurrence Download

description: A dataset containing 3019 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Prunus salicina Lindl.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3019 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021900-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/vz9y-tm47
title: Hearthstone Lake ostracode surface sample dataset

description: Raw data for the Hearthstone Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.d8pskx
title: Occurrence Download

description: A dataset containing 1263 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (March, April, May, June, July, August, September, October, November, December)",
 "OccurrenceStatus is Present",
 "TaxonKey is Aythya nyroca (Güldenstädt, 1770)",
 "Year 2010-2010"
 ]
}

 The dataset includes 1263 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021901-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/22zy-z411
title: Railway testate amoebae surface sample dataset

description: Raw data for the Railway testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.27211806
title: Supplementary Video for "Gummatous mitral valve endocarditis from tertiary syphilis"

description: Transthoracic echocardiogram demonstrating endocarditis from syphilis
DOI: 10.6084/m9.figshare.27211806.v1
title: Supplementary Video for "Gummatous mitral valve endocarditis from tertiary syphilis"

description: Transthoracic echocardiogram demonstrating endocarditis from syphilis
DOI: 10.6073/pasta/09629bdc2f60622fd526a3435989c71d
title: Arthropod species composition in the black sand extended growing season experiment, 2021.

description: Understanding overall arthropod diversity in alpine systems will help us determine how diverse our biota is and what functional ecological roles these animals can provide to ecosystem maintenance and stability. And ultimately, how these services are altered with climate change. Arthropod diversity and functional roles will be altered with climate change, and understanding these interactions will teach us how to protect alpine systems and make predictions for the impacts to other ecosystems. Understanding impacts on pollinators will help us predict the quality of pollinator services at lower elevations, which species need support/protection, and any policies and food management strategies that need to be implemented to adapt to changes in food production.
DOI: 10.15468/dl.9hybx7
title: Occurrence Download

description: A dataset containing 191328 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 {
 "or" : [
 "Geometry POLYGON((97.19379 46.97111,96.7189 46.35634,96.27639 45.81738,96.76207 45.56859,97.0211 45.41727,97.20459 45.01432,98.02485 44.56239,98.98543 44.11466,100.4209 44.19984,101.38147 44.28489,102.44998 44.80028,104.2632 45.68935,103.76672 46.28925,103.45372 46.49025,102.83852 46.51997,102.53632 46.21462,102.05064 46.0201,101.66209 45.99761,100.50724 46.73492,99.69777 47.17692,98.83433 47.08881,98.33785 46.89003,97.89534 46.96374,97.19379 46.97111))",
 "Geometry POLYGON((66.99254 44.71117,67.44426 43.56034,67.87339 42.16985,66.36013 41.53054,64.8017 40.42221,65.23083 39.81772,65.84065 39.435,65.52445 38.57501,65.36635 37.79388,65.81807 37.63308,66.81185 37.86524,67.39908 39.17285,68.14442 39.59182,72.79712 40.47377,73.02298 40.97018,72.27765 41.34429,70.60629 41.05539,69.72544 40.62822,69.74802 41.27643,69.47699 41.6994,70.08681 42.33702,69.86095 43.13329,69.45441 43.78904,68.27994 44.38926,66.99254 44.71117))",
 "Geometry POLYGON((97.90045 32.60982,97.66399 32.03893,97.96801 31.43564,98.37336 30.20279,99.06583 28.06383,99.48807 27.16591,99.85964 26.62365,101.09258 26.8951,100.95747 27.30106,101.44727 27.78028,101.5486 28.2574,101.86951 28.51001,102.08907 28.79162,101.8864 29.161,101.7175 30.05672,101.49793 30.43607,101.37971 31.06022,100.48456 31.82392,99.03205 32.49593,97.90045 32.60982))",
 "Geometry POLYGON((87.34811 50.67795,86.91474 50.52985,87.26477 50.22157,86.8814 49.59901,85.64796 49.67457,85.04791 49.53415,84.33118 49.23032,86.38136 49.05586,88.01483 48.37401,90.21502 47.27737,92.18186 46.35345,93.58199 45.90294,93.48198 46.19215,93.29863 46.28438,92.54856 46.78887,92.04852 47.10748,90.98176 48.06305,91.04843 48.56189,90.99843 48.84789,89.94833 48.85886,89.79832 49.21943,89.56497 49.76079,88.4482 49.96494,87.34811 50.67795))",
 "Geometry POLYGON((77.84428 31.4779,78.17193 31.06264,78.71426 30.40224,79.83282 29.97253,80.90618 29.50162,81.97954 28.76143,83.32406 28.25508,83.87769 28.5433,84.21665 29.28505,84.03587 29.87461,83.50484 30.07036,83.39185 29.77659,82.95121 30.02146,82.80433 30.29499,82.72524 30.56777,82.30719 30.82037,81.45981 31.10135,80.51073 31.62232,79.66334 32.41742,79.31309 32.51275,78.54479 31.92968,77.84428 31.4779))"
 ]
 },
 "Month is one of (April, May, June, July, August)",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 {
 "or" : [
 "Year 1981-1999",
 "Year 2016-2025"
 ]
 }
 ]
}

 The dataset includes 191328 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021855-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/npe9-gn49
title: Greffelkampsche Broek pollen dataset

description: Raw data for the Greffelkampsche Broek pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/jd0z-ry25
title: Red River water chemistry dataset

description: Raw data for the Red River water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/qw19-mk37
title: LDDsite3120 ostracode surface sample dataset

description: Raw data for the LDDsite3120 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.28959509
title: <b>Tree diversity alters CUE thermal response</b>

description: In the context of global warming, understanding microbial responses to temperature changes is crucial for predicting soil carbon dynamics, but whether soil microbial carbon use efficiency (CUE) are adaptive to warming remains unclear. Here, we assayed thermal responses of microbial respiration, growth rates and CUE using soils across a natural plant species diversity gradient in a subtropical mature forest, southwest China. We found that higher tree species diversity strengthened both thermal compensation adaptation of microbial respiration and growth, and the thermal enhancement adaptation of microbial CUE. These adaptations were mainly attributed to reduced temperature responsiveness of bacterial K:r ratio, and amplified temperature responsiveness of enzymatic activity, and intensified competitive interactions within fungal taxa. Our findings suggest that restoring and conserving plant species diversity can enhance soil’s capacity to mitigate climate change, not only by reducing respiratory losses but also via increasing soil organic carbon stability.
DOI: 10.21233/56n9-1e43
title: ALBI18 pollen surface sample dataset

description: Raw data for the ALBI18 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.pkyha8
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Patanga succincta (Johannson, 1763)",
 "Country is Japan"
 ]
}

 The dataset includes 142 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021902-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/ahqv-k716
title: Rawcourt Lake ostracode surface sample dataset

description: Raw data for the Rawcourt Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/b1zh-p349
title: Campbell Lake water chemistry dataset

description: Raw data for the Campbell Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.hbfgw7
title: Occurrence Download

description: A dataset containing 1395 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aralia elata (Miq.) Seem.",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2010",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1395 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021903-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15125086
title: Datasets for machine learning model for efficient non-thermal tuning of the charge density wave in monolayer NbSe2

description: 1H_NbSe2_frames_tot_ML_all.xyz :    structures used for training of ML models

xdos_0.01_fermi_tot_all.npy :    energy grid used for training of KRR model

ldos_0.01_fermi_tot_all.npy :    constructed eDOS used for training of KRR model

1H_NbSe2_model_6_run-123.model :    MACE model without SWA

1H_NbSe2_model_6_run-123_swa.model :    MACE model with SWA

86_fermi.json :    KRR model, "ML used" model from the main paper

86_fermi-krr-weights.npy :    weights of the KRR model


 



c2db-12553.json :    unit cell of a structure used for the phonon calculations; downloaded from: https://next-gen.materialsproject.org/


 



conda_environment.yml :    Conda environment used 

to install librascal version we have used, one should download it from this link: https://github.com/cbenmahm/librascal/tree/finite_T_calc , after that one should replace asemd.py file with the asemd.py file given here; example of a path where asemd.py file is located in the conda environment: anaconda3/envs/rascal_calc/lib/python3.9/site-packages/rascal/models


 



1H_NbSe2_SSCHA.py :    Python script used for SSCHA calculations without electronic temperature

1H_NbSe2_laser.py :    Python script used for SSCHA calculations with a finite electronic temperature
DOI: 10.5281/zenodo.15125087
title: Datasets for machine learning model for efficient non-thermal tuning of the charge density wave in monolayer NbSe2

description: 1H_NbSe2_frames_tot_ML_all.xyz :    structures used for training of ML models

xdos_0.01_fermi_tot_all.npy :    energy grid used for training of KRR model

ldos_0.01_fermi_tot_all.npy :    constructed eDOS used for training of KRR model

1H_NbSe2_model_6_run-123.model :    MACE model without SWA

1H_NbSe2_model_6_run-123_swa.model :    MACE model with SWA

86_fermi.json :    KRR model, "ML used" model from the main paper

86_fermi-krr-weights.npy :    weights of the KRR model


 



c2db-12553.json :    unit cell of a structure used for the phonon calculations; downloaded from: https://next-gen.materialsproject.org/


 



conda_environment.yml :    Conda environment used 

to install librascal version we have used, one should download it from this link: https://github.com/cbenmahm/librascal/tree/finite_T_calc , after that one should replace asemd.py file with the asemd.py file given here; example of a path where asemd.py file is located in the conda environment: anaconda3/envs/rascal_calc/lib/python3.9/site-packages/rascal/models


 



1H_NbSe2_SSCHA.py :    Python script used for SSCHA calculations without electronic temperature

1H_NbSe2_laser.py :    Python script used for SSCHA calculations with a finite electronic temperature
DOI: 10.21233/28eg-xa69
title: Lost Chicken Site insect dataset

description: Raw data for the Lost Chicken Site insect dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.rcan6c
title: Occurrence Download

description: A dataset containing 112485 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Mimosa L."
 ]
}

 The dataset includes 112485 records from 337 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021891-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/75w-f1l-a17
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8gz-5wr-the
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ggg-e5a-h3w
title: †Spiriferina d'Orbigny, 1847

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n08-le0-s7j
title: †Productus Sowerby, 1814

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/le9-33g-w32
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qkn-3fp-z7j
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w4b-74f-z2k
title: Anthozoa

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x49-6k5-xtv
title: †Asaphus expansus (Wahlenberg, 1821)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1yt-rb4-0rh
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dth-py9-wp6
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0jh-nbv-2zm
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1h8-zpf-6p6
title: Spondyliosoma

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/amx-jed-pky
title: Gonionotites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rya-9g2-jts
title: †Favorites Tschigova, 1977

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1v0-1ym-a89
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ht1-gcc-2yt
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.15755830
title: Lake Nakuru Core Age Model

description: Files and R Code for age model of Lake Nakuru Core from Robakiewicz et al. (2025)
DOI: 10.3535/v9y-rfh-8nj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.15755829
title: Lake Nakuru Core Age Model

description: Files and R Code for age model of Lake Nakuru Core from Robakiewicz et al. (2025)
DOI: 10.3535/81p-dt8-wnn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/acv-jrz-5wn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/08x-yly-wgy
title: †Spirifer Sowerby, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yn0-et3-0q3
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mk9-crq-q2s
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8xr-6v1-kbl
title: †Productus Sowerby, 1814

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dzw-36w-a1h
title: †Axophyllia d'Orbigny, 1849

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.cr4vyx
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tradescantia zebrina",
 "Country is Dominican Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 33 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022883-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/rmy-le3-h00
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y5v-w52-t0k
title: †Beisselina boryana (von Hagenow, 1851)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jbn-2m4-a5s
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n8l-cdl-3rq
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5hj-rnl-l44
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ge1-te6-9ec
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8q5-fsh-vqf
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/aal-avn-gj8
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y26-3zd-bq4
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.9dytcj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tradescantia zebrina",
 "Country is Micronesia (Federated States of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022884-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/2vc-6y0-tfc
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h09-sby-0fz
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0tt-waf-p48
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/feq-2bs-xel
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.qn6sbq
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_2_GID","value":"USA.4.4_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 245 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007298-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.udj3gv
title: Occurrence Download

description: A dataset containing 2739 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "StateProvince is one of (Maine, Connecticut, Vermont, Massachusetts, New Hampshire)",
 "TaxonKey is Ailanthus altissima",
 "Year 2015-2026"
 ]
}

 The dataset includes 2739 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007299-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.