cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25505/fiz.icsd.cc22zfs9
title: CSD 1935881: Experimental Crystal Structure Determination

description: Related Article: Yangwu Guo, Fei Liang, Zhuang Li, Wenhao Xing, Zheshuai Lin, Jiyong Yao, Yicheng Wu|2019|Cryst.Growth Des.|19|5494|doi:10.1021/acs.cgd.9b01074
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc24fqt4
title: CSD 1979406: Experimental Crystal Structure Determination

description: Related Article: Srinivasa Rao Amanchi, Samar K. Das|2018|Frontiers in Chemistry|6|469|doi:10.3389/fchem.2018.00469
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24g3c3
title: CSD 1979764: Experimental Crystal Structure Determination

description: Related Article: Peng Du, Yuting Zhang, Xuerui Wang, Stefano Canossa, Zhou Hong, Gwilherm Nénert, Wanqin Jin, Xuehong Gu|2022|Nat.Commun.|13|1427|doi:10.1038/s41467-022-29126-6
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24g3d4
title: CSD 1979765: Experimental Crystal Structure Determination

description: Related Article: Peng Du, Yuting Zhang, Xuerui Wang, Stefano Canossa, Zhou Hong, Gwilherm Nénert, Wanqin Jin, Xuehong Gu|2022|Nat.Commun.|13|1427|doi:10.1038/s41467-022-29126-6
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24g3f5
title: CSD 1979766: Experimental Crystal Structure Determination

description: Related Article: Peng Du, Yuting Zhang, Xuerui Wang, Stefano Canossa, Zhou Hong, Gwilherm Nénert, Wanqin Jin, Xuehong Gu|2022|Nat.Commun.|13|1427|doi:10.1038/s41467-022-29126-6
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.gsramy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Breviceps bagginsi Minter, 2003",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.4784 -23.4046,15.4933 -24.0715,20.509 -24.0715,20.509 -24.0455,20.0952 -23.5072,19.9968 -23.017,19.7843 -22.5405,19.1988 -21.8785,18.5972 -21.5447,17.8859 -21.3993,17.1626 -21.4805,16.5332 -21.7596,16.1257 -22.0882,15.8234 -22.4662,15.606 -22.8993,15.4784 -23.4046))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031462-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15626756
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250609t Initial

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250609t Initial. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.15626757
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250609t Initial

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250609t Initial. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.15468/dl.nunvzq
title: Occurrence Download

description: A dataset containing 8527 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Global Register of Introduced and Invasive Species - United States (Contiguous) (ver.2.0, 2022)"
 ]
}

 The dataset includes 8527 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031463-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8d8chh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Breviceps bagginsi Minter, 2003",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -28.5786,20.509 -28.5786,20.509 -32.9007,25.5395 -32.9007,25.5395 -28.5786))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031464-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15626551
title: B2P 2024 Exometabolite incubation amplicon sequences

description: 16s rRNA amplicon sequence files generated from the C-CoMP B2P BIOS Research Week 2024 exometabolite incubation experiment conducted at the Bermuda Institute of Ocean Sciences in March 2024. Sequence data files were generated from both natural, unamended seawater microbial communities (Bulk1_..., Bulk2_..., Bulk3_...) and experimental end-member communities, including: triplicate biotic (unamended) community DNA collected after 56 hours of incubation (B1_..., B2_..., B3_...), triplicate DNA samples from microbial communities amended with Micromonas commoda-derived metabolite mix after 56 hours (Mic1_..., Mic2_..., Mic3_...), and triplicate DNA samples from microbial communities amended with Prochlorococcus marinus-derived metabolite mix after 56 hours (Pro1_..., Pro2_..., Pro3_...). An average of 1800 mL of seawater was filtered to obtain DNA in the unamended seawater microbial communities, while an average of 800 mL seawater was filtered to obtain the end-member community DNA samples. The Dyhrman Lab extracted DNA, and library prep and sequencing were performed at Argonne National Laboratory on an Illumina MiSeq platform in May 2024. Code for bioinformatics analysis is stored at https://github.com/C-CoMP-STC/B2P23-BIOS-Week.
DOI: 10.5281/zenodo.15626552
title: B2P 2024 Exometabolite incubation amplicon sequences

description: 16s rRNA amplicon sequence files generated from the C-CoMP B2P BIOS Research Week 2024 exometabolite incubation experiment conducted at the Bermuda Institute of Ocean Sciences in March 2024. Sequence data files were generated from both natural, unamended seawater microbial communities (Bulk1_..., Bulk2_..., Bulk3_...) and experimental end-member communities, including: triplicate biotic (unamended) community DNA collected after 56 hours of incubation (B1_..., B2_..., B3_...), triplicate DNA samples from microbial communities amended with Micromonas commoda-derived metabolite mix after 56 hours (Mic1_..., Mic2_..., Mic3_...), and triplicate DNA samples from microbial communities amended with Prochlorococcus marinus-derived metabolite mix after 56 hours (Pro1_..., Pro2_..., Pro3_...). An average of 1800 mL of seawater was filtered to obtain DNA in the unamended seawater microbial communities, while an average of 800 mL seawater was filtered to obtain the end-member community DNA samples. The Dyhrman Lab extracted DNA, and library prep and sequencing were performed at Argonne National Laboratory on an Illumina MiSeq platform in May 2024. Code for bioinformatics analysis is stored at https://github.com/C-CoMP-STC/B2P23-BIOS-Week.
DOI: 10.5281/zenodo.10081766
title: Digital Government Performance Thailand

description: The dataset is collected on the basis of a modified Digital government performance questionnaire prepared by the OECD. The questionnaire anlyses the use of digital tools and the level of digitalisation of the public sector in Thailand.
DOI: 10.5281/zenodo.10081767
title: Digital Government Performance Thailand

description: The dataset is collected on the basis of a modified Digital government performance questionnaire prepared by the OECD. The questionnaire anlyses the use of digital tools and the level of digitalisation of the public sector in Thailand.
DOI: 10.5281/zenodo.15511607
title: Digital Government Performance Thailand

description: The dataset is collected on the basis of a modified Digital government performance questionnaire prepared by the OECD. The questionnaire anlyses the use of digital tools and the level of digitalisation of the public sector in Thailand.
DOI: 10.5281/zenodo.15626758
title: Digital Government Performance Thailand

description: The dataset is collected on the basis of a modified Digital government performance questionnaire prepared by the OECD. The questionnaire anlyses the use of digital tools and the level of digitalisation of the public sector in Thailand.
DOI: 10.15468/dl.z848dv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Breviceps bagginsi Minter, 2003",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.7576 -24.3688,20.529 -24.0715,20.509 -24.0715,20.509 -28.5786,25.5395 -28.5786,25.5395 -24.0715,25.1306 -24.0715,24.9333 -24.4571,23.8962 -24.2467,22.8065 -24.295,22.3719 -24.7207,22.2323 -25.547,22.0387 -25.7188,21.7833 -25.7784,21.5388 -25.7113,21.3553 -25.5415,20.7576 -24.3688))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031465-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.14963080
title: Dataset of 111 metagenome-assembled genomes from cattle manure, soil and manured soil samples

description: Description of the data and file structure

This data consists of fasta sequences and related information of 111 metagenome-assembled genomes from microcosms constructed with fresh manure of dairy cows under antibiotic prophylaxis and pasture soil of two organic farms. The data can also be accessed via NCBI BioProject PRJNA1231077 

Files and variables

File: MAGs_FASTA_files.zip

Description: ZIP-compresed FASTA files of the MAGs

File: MAGs_data.xlsx

Description: Excel file containing MAGs information

Variables





name of MAGs




origin (i.e., manure, soil or manured soil) and experiment (soil S or B)




name of the original sample




assembly type and binning method




MAG filename




taxonomic affiliations predicted using GTDB-Tk, including the best match taxonomy and % ANI to the closest placement if available




quality metrics (completeness, contamination)




detection of 5S, 16S and 23S rRNA genes




tRNA amino acids




coverage


mapping reads % on average and the maximum in one sample



assembly stats (GC content, N50, genome size, scaffold and contig count, N90, L50 and L90)




NCBI information (i.e., SRA and BioSample accessions, coverage)




16S rRNA-based identification and sequence



Access information

Other publicly accessible locations of the data:





NCBI BioProject PRJNA1231077 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1231077)



Data was derived from the following sources:





NCBI BioProject PRJNA743290 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA743290)
DOI: 10.5281/zenodo.14963081
title: Dataset of 111 metagenome-assembled genomes from cattle manure, soil and manured soil samples

description: Dataset of 111 metagenome-assembled genomes from cattle manure, soil and manured soil samples

Dataset DOI: 10.5281/zenodo.14963081

Description of the data and file structure

This data consists of fasta sequences and related information of 111 metagenome-assembled genomes from microcosms constructed with fresh manure of dairy cows under antibiotic prophylaxis and pasture soil of two organic farms. The data can also be accessed via NCBI BioProject PRJNA1231077 

Files and variables

File: MAGs_FASTA_files.zip

Description: ZIP-compresed FASTA files of the MAGs

File: MAGs_data.xlsx

Description: Excel file containing MAGs information

Variables





name of MAGs




name of the sample




NCBI information (i.e., SRA and BioSample accessions, coverage)




binning method




quality metrics (completeness, contamination, GC content, N50, genome size, scaffold and contig count, N90, L50 and L90)




taxonomic affiliations predicted using GTDB, including the best match taxonomy and % ANI to the closest placement if available




mapping reads % on average and the maximum in one sample




16S rRNA-based identification and sequence



Access information

Other publicly accessible locations of the data:





NCBI BioProject PRJNA1231077 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1231077)



Data was derived from the following sources:





NCBI BioProject PRJNA743290 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA743290)
DOI: 10.5281/zenodo.15309541
title: Dataset of 111 metagenome-assembled genomes from cattle manure, soil and manured soil samples

description: Description of the data and file structure

This data consists of fasta sequences and related information of 111 metagenome-assembled genomes from microcosms constructed with fresh manure of dairy cows under antibiotic prophylaxis and pasture soil of two organic farms. The data can also be accessed via NCBI BioProject PRJNA1231077 

Files and variables

File: MAGs_FASTA_files.zip

Description: ZIP-compresed FASTA files of the MAGs

File: MAGs_data.xlsx

Description: Excel file containing MAGs information

Variables





name of MAGs




origin (i.e., manure, soil or manured soil) and experiment (soil S or B)




name of the original sample




assembly type and binning method




MAG filename




taxonomic affiliations predicted using GTDB-Tk, including the best match taxonomy and % ANI to the closest placement if available




quality metrics (completeness, contamination)




detection of 5S, 16S and 23S rRNA genes




tRNA amino acids




coverage


mapping reads % on average and the maximum in one sample



assembly stats (GC content, N50, genome size, scaffold and contig count, N90, L50 and L90)




NCBI information (i.e., SRA and BioSample accessions, coverage)




16S rRNA-based identification and sequence



Access information

Other publicly accessible locations of the data:





NCBI BioProject PRJNA1231077 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1231077)



Data was derived from the following sources:





NCBI BioProject PRJNA743290 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA743290)
DOI: 10.15468/dl.uxzrmj
title: Occurrence Download

description: A dataset containing 83392 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Equus caballus Linnaeus, 1758",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 83392 records from 156 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031460-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fm2bta
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Breviceps bagginsi Minter, 2003",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.529 -24.0715,20.509 -24.0455,20.509 -24.0715,20.529 -24.0715))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031466-250525065834625/datasets/export for details.
DOI: 10.15468/dl.wxvasz
title: Occurrence Download

description: A dataset containing 194 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acropora globiceps (Dana, 1846)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 194 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031467-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.37tnnc
title: Occurrence Download

description: A dataset containing 1148398 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anser caerulescens (Linnaeus, 1758))",
 "HasCoordinate is true",
 "Year is greater than or equal to 1970"
 ]
}

 The dataset includes 1148398 records from 209 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031455-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gh6qq8
title: Occurrence Download

description: A dataset containing 637 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bradypus tridactylus Linnaeus, 1758",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 637 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031468-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tf7h43
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aglaonema nitidum (Jack) Kunth)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1970"
 ]
}

 The dataset includes 83 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031469-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c72fha
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Breviceps bagginsi Minter, 2003",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -23.2724,25.1306 -24.0715,25.5395 -24.0715,25.5395 -23.2724))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031470-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15622507
title: Fault Geometry and Source Mechanics of the Altotiberina Fault System from a High Resolution Machine-Learning Earthquake Catalog

description: This dataset contains the high-resolution earthquake catalog generated for the Altotiberina Fault System (Northern Apennines, Italy). The catalog spans the period from January 2010 to April 2023 and comprises event IDs, locations, origin times, and magnitudes. The magnitudes provided are approximate PGV-based estimates derived using GaMMA (Zhu et al., 2022). These magnitudes are provisional and are subject to future refinement as part of ongoing research.

Detailed methodologies for catalog generation and comprehensive analysis of this dataset can be found in the corresponding peer-reviewed manuscript:

"Fault Geometry and Source Mechanics of the Altotiberina Fault System from a High Resolution Machine-Learning Earthquake Catalog" by Poggiali G., Chiaraluce L., Ross Z. E., Zhu W., and Marone C.

This manuscript has been accepted for publication in the Bulletin of the Seismological Society of America (BSSA).
DOI: 10.5281/zenodo.15622508
title: Fault Geometry and Source Mechanics of the Altotiberina Fault System from a High Resolution Machine-Learning Earthquake Catalog

description: This dataset contains the high-resolution earthquake catalog generated for the Altotiberina Fault System (Northern Apennines, Italy). The catalog spans the period from January 2010 to April 2023 and comprises event IDs, locations, origin times, and magnitudes. The magnitudes provided are approximate PGV-based estimates derived using GaMMA (Zhu et al., 2022). These magnitudes are provisional and are subject to future refinement as part of ongoing research.

Detailed methodologies for catalog generation and comprehensive analysis of this dataset can be found in the corresponding peer-reviewed manuscript:

"Fault Geometry and Source Mechanics of the Altotiberina Fault System from a High Resolution Machine-Learning Earthquake Catalog" by Poggiali G., Chiaraluce L., Ross Z. E., Zhu W., and Marone C.

This manuscript has been accepted for publication in the Bulletin of the Seismological Society of America (BSSA).
DOI: 10.15468/dl.nxg6qz
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Protobryum bryoides (Dicks.) Mitt."
 ]
}

 The dataset includes 36 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100466-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wju6fr
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eriocaulon pykarense Nampy & Manudev"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0201169-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.64nazq
title: Occurrence Download

description: A dataset containing 9264 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Big Island Invasive Species Committee - Pest Reports - 2005-2010"
 ]
}

 The dataset includes 9264 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072130-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.