cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/th099008
title: TH099008
title: Thyronectria

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.57745/n6ij1k
title: Script-ESR10-Exp1-growth.Rmd

description: Data analysis (viable growth count + pH)
DOI: 10.15156/bio/th099009
title: TH099009
title: Aegilops

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th099010
title: TH099010
title: Lembotropis

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th099011
title: TH099011
title: Cyanoannulus

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15468/dl.b3g3nb
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is ECU.12_1",
 "TaxonKey is Hordeum vulgare L."
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054155-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/th099012
title: TH099012
title: Roseodiscus

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th099013
title: TH099013
title: Glyptocephalus

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th099014
title: TH099014
title: Pseudoroegneria

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th099015
title: TH099015
title: Downingia

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15156/bio/th099016
title: TH099016
title: Anemonia

description: Here we present the novel 'taxon hypothesis' (TH) concept to accommodate fungal 'species hypothesis' (SH) into existing classification frameworks for taxonomic communication. As supplied with Digital Object Identifiers (DOIs), THs are flexible in time and enable direct cross-communication of higher level taxa along with evolving classification schemes. Every TH includes given number of SHs and consequently fixed number of fungal rDNA ITS sequences. DNA sequences generated by High-throughput or Sanger sequencing studies and identified against UNITE SHs will be automatically assigned to THs as well.
DOI: 10.15468/dl.95g6zh
title: Occurrence Download

description: A dataset containing 41682 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhinolophus ferrumequinum (Schreber, 1774)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 41682 records from 1276 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054152-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.df9yba
title: Occurrence Download

description: A dataset listing the 2698 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-61.39329 15.17554,-61.22225 15.24585,-61.24131 15.54391,-61.28486 15.5979,-61.53165 15.6968,-61.50398 15.66504,-61.51714 15.66504,-61.39329 15.17554))",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 2698 records were derived from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010057-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.thk7mu
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (90fd6680-349f-11d8-aa2d-b8a03c50a862, 87a78f75-b63e-4c3e-9ecf-7557e13f090e, 8e1a97a0-3ca8-11d9-8439-b8a03c50a862, 8d861745-d64d-419e-a9ea-251f56a631a7, ae447c50-b8a8-11d8-92a4-b8a03c50a862, 253fc67c-c7fb-4c85-88f5-43ac6d9dc8a9, fee3882f-5360-4f01-a1ca-767c48fa629c)",
 "TaxonKey is Musa ×paradisiaca L."
 ]
}

 The dataset includes 40 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010071-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qrtp9x
title: Occurrence Download

description: A dataset containing 7951 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Specimen)",
 "Continent is one of (North America, South America)",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Fauna registrada mediante cámaras trampa en el marco del proyecto Expedición del Oso Palmero en el departamento del Casanare, Registros de fauna marino-costera y terrestre encontrados en el golfo de Urabá, Fauna y flora del Distrito Nacional de Manejo Integrado Cinaruco en el año 2021, Observation.org, Nature data from around the World, Monitoreo pasivo de fauna silvestre con cámaras trampa en el Magdalena Medio, Santander y Cesar, Colombia - Proyecto FIBRAS, Monitoreo de seguimiento de fauna pozo Lisama 158, séptimo informe, Vertebrate Zoology Division - Herpetology, Yale Peabody Museum, Monitoreo de seguimiento de fauna pozo Lisama 158, décimo informe, NABU|naturgucker)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Caiman crocodilus (Linnaeus, 1758)",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 7951 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010070-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zxrq2d
title: Occurrence Download

description: A dataset containing 604 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Schefflera actinophylla (Endl.) Harms"
 ]
}

 The dataset includes 604 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010073-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bxrpfd
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Schefflera brassaiella Ridl."
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010074-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10677382
title: Neo-Assyrian Imperial Religion Counts: A Quantitative Approach to the Affiliations of Kings and Queens with Their Gods and Goddesses

description: This repository contains the data used for and generated during our research for the article "Neo-Assyrian Imperial Religion Counts: A Quantitative Approach to the Affiliations of Kings and Queens with Their Gods and Goddesses" by Amy Gansell, Tero Alstola, Heidi Jauhiainen, and Saana Svärd, published in the Journal of Ancient Near Eastern Religions 24 (2024), 236-274, https://doi.org/10.1163/15692124-12341349.

In the article, we study the relationships between Neo-Assyrian deities, kings, and queens. Our text data on kings comes from the Open Richly Annotated Cuneiform Corpus (Oracc). After preprocessing our dataset, we analyzed 575 texts in which at least one king and one deity co-occur within a window of ten words. These texts come from the Oracc projects RINAP, RIAo, RIBo, and SAAo. The connections between queens and deities were collected manually.

The folders in this repository contain the following:

Kings: Files that relate to the textual dataset on kings and deities, including various statistics and the text file from which we extracted the co-occurrences of kings and deities within a window of ten words.

OraccData: Oracc texts and their metadata converted to .tsv files.

Queens: Data used for analyzing the co-occurrences of queens and deities, including some statistics.

Standardization: Lists used for standardizing proper nouns in the textual data.

Tables: Full versions of the tables that are published in a shortened form in the article.

We gratefully acknowledge that our research has been funded by the Academy of Finland (decision numbers 298647, 312051, and 330727). Our research data originates from the Open Richly Annotated Cuneiform Corpus (Oracc). We thank Oracc for their efforts in making linguistically annotated cuneiform texts available online. We are indebted to everyone who has been involved in creating this research data, including the authors of the original publications and the researchers who have made the data Oracc-compatible and enriched it through lemmatizations and by adding other metadata (for a list of projects and their contributors, see the file OraccCredits.txt). In the context of this article and dataset, we want to acknowledge the work of the Munich Open-access Cuneiform Corpus Initiative (PIs Karen Radner and Jamie Novotny) and the Royal Inscriptions of the Neo-Assyrian Period project (PI Grant Frame) in particular. We thank Jamie Novotny for making the royal inscriptions of Sargon II from the RINAP 2 project available to us before their publication. We thank Aleksi Sahala for support with the Pmizer tool and running the first co-occurrence lists, Johannes Bach for helping to develop the rules to replace first person verbs and pronouns, Repekka Uotila for help with preliminary analysis of our data, and Shana Zaia for feedback on earlier drafts of the article.
DOI: 10.5281/zenodo.10677383
title: Neo-Assyrian Imperial Religion Counts: A Quantitative Approach to the Affiliations of Kings and Queens with Their Gods and Goddesses

description: This repository contains the data used for and generated during our research for the article "Neo-Assyrian Imperial Religion Counts: A Quantitative Approach to the Affiliations of Kings and Queens with Their Gods and Goddesses" by Amy Gansell, Tero Alstola, Heidi Jauhiainen, and Saana Svärd, published in the Journal of Ancient Near Eastern Religions 24 (2024), 236-274, https://doi.org/10.1163/15692124-12341349.

In the article, we study the relationships between Neo-Assyrian deities, kings, and queens. Our text data on kings comes from the Open Richly Annotated Cuneiform Corpus (Oracc). After preprocessing our dataset, we analyzed 575 texts in which at least one king and one deity co-occur within a window of ten words. These texts come from the Oracc projects RINAP, RIAo, RIBo, and SAAo. The connections between queens and deities were collected manually.

The folders in this repository contain the following:

Kings: Files that relate to the textual dataset on kings and deities, including various statistics and the text file from which we extracted the co-occurrences of kings and deities within a window of ten words.

OraccData: Oracc texts and their metadata converted to .tsv files.

Queens: Data used for analyzing the co-occurrences of queens and deities, including some statistics.

Standardization: Lists used for standardizing proper nouns in the textual data.

Tables: Full versions of the tables that are published in a shortened form in the article.

We gratefully acknowledge that our research has been funded by the Academy of Finland (decision numbers 298647, 312051, and 330727). Our research data originates from the Open Richly Annotated Cuneiform Corpus (Oracc). We thank Oracc for their efforts in making linguistically annotated cuneiform texts available online. We are indebted to everyone who has been involved in creating this research data, including the authors of the original publications and the researchers who have made the data Oracc-compatible and enriched it through lemmatizations and by adding other metadata (for a list of projects and their contributors, see the file OraccCredits.txt). In the context of this article and dataset, we want to acknowledge the work of the Munich Open-access Cuneiform Corpus Initiative (PIs Karen Radner and Jamie Novotny) and the Royal Inscriptions of the Neo-Assyrian Period project (PI Grant Frame) in particular. We thank Jamie Novotny for making the royal inscriptions of Sargon II from the RINAP 2 project available to us before their publication. We thank Aleksi Sahala for support with the Pmizer tool and running the first co-occurrence lists, Johannes Bach for helping to develop the rules to replace first person verbs and pronouns, Repekka Uotila for help with preliminary analysis of our data, and Shana Zaia for feedback on earlier drafts of the article.
DOI: 10.5281/zenodo.14794475
title: Dental student satisfaction in flipped-classroom seminars enhanced by artificial intelligence-generated podcasts: a comparative study

description: This dataset comprises the survey results and AI-generated podcasts used as pre-class resources in flipped-classroom seminars.
DOI: 10.15468/dl.8u9fmp
title: Occurrence Download

description: A dataset containing 11877 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Specimen, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC0 1.0, CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Nepenthes L."
 ]
}

 The dataset includes 11877 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010075-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vwx2se
title: Occurrence Download

description: A dataset containing 649 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Schefflera macrocarpa (Cham. & Schltdl.) Frodin"
 ]
}

 The dataset includes 649 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010076-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2b3xqw
title: Occurrence Download

description: A dataset containing 4459690 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Czechia"
 ]
}

 The dataset includes 4459690 records from 1146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010060-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10731577
title: Supplementary material for the article "The cum-sine Pattern in German Child Language"

description: This data set includes the supplementary material for the article "The cum-sine Pattern in German Child Language: An Argument for Antonym Decomposition". All content is documented in the README.md file.

Abstract: German speaking children between ages 2 and 3 mostly use the preposition ohne ('without') in an adult-like way, to express the absence of something. In this paper we present surprising results from a corpus study suggesting that in this age group, absence can also be expressed using the sequence mit ohne ('with without'). We argue that this pattern becomes much less surprising if we assume that there is a conceptual representation independent of linguistic structure, and that antonymic concepts such as that of absence (which we call sine in this paper) are not represented as primitive concepts at this level – contrary to what might be suspected on the basis of mono-morphemic prepositions such as German ohne ('without'). Instead, we argue that antonymic concepts like that of absence (sine) are composed of at least two units. Children’s non-adult like patterns then result from difficulties in acquiring the morphological realization of this complex concept as the monomorphemic preposition ohne. To our knowledge, our results constitute the first evidence for antonym decomposition in the case of prepositions.
DOI: 10.5281/zenodo.10731578
title: Supplementary material for the article "The cum-sine Pattern in German Child Language"

description: This data set includes the supplementary material for the article "The cum-sine Pattern in German Child Language: An Argument for Antonym Decomposition". All content is documented in the README.md file.

Abstract: German speaking children between ages 2 and 3 mostly use the preposition ohne ('without') in an adult-like way, to express the absence of something. In this paper we present surprising results from a corpus study suggesting that in this age group, absence can also be expressed using the sequence mit ohne ('with without'). We argue that this pattern becomes much less surprising if we assume that there is a conceptual representation independent of linguistic structure, and that antonymic concepts such as that of absence (which we call sine in this paper) are not represented as primitive concepts at this level – contrary to what might be suspected on the basis of mono-morphemic prepositions such as German ohne ('without'). Instead, we argue that antonymic concepts like that of absence (sine) are composed of at least two units. Children’s non-adult like patterns then result from difficulties in acquiring the morphological realization of this complex concept as the monomorphemic preposition ohne. To our knowledge, our results constitute the first evidence for antonym decomposition in the case of prepositions.