cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11341865.v1
title: 48hrs and 72hrs dose-percent response data.xlsx

description: <i>Bemisia tabaci</i> populations were collected from greenhouses located in Aydıncık, Kazanlı, Kocahasanlı, Silifke and Sipahili districts in southern Turkey (Mersin province). Three neonicotinoid insecticides—acetamiprid 207g/kg (Mospilan™, Sumi Agro Turkey, Istanbul, Turkey), imidacloprid 350 g L<sup>-1</sup> (Confidor™, Bayer Crop Sciences, Leverkusen, Germany), and thiamethoxam 240 g L<sup>-1</sup> (Actara™, Syngenta, Izmir, Turkey)—and three non-neonicotinoid insecticides—spinetoram 120 g L<sup>-1</sup> (Radiant™, Dow AgroSciences, Istanbul, Turkey), spinosad 480 g L<sup>-1</sup> (Laser™, Dow AgroSciences, Istanbul, Turkey), and sulfoxaflor 50% W/W (Transform™, Dow AgroSciences, Istanbul, Turkey)—were used in the bioassays. Serial dilutions were prepared for each insecticide using distilled water to determine population specific concentrations. A 0.1 g L<sup>-1</sup> Triton X-100 was included in the insecticide concentrations. A total of five to seven concentrations that caused nearly 10% to 95% mortality were determined (IRAC, https:// irac-online.org).The method described by the Insecticide Resistance Action Committee (IRAC) was used to determine the resistance status of whitefly populations (IRAC, https:// irac-online.org). Bean leaf-discs (3cm in diameter) that were cut using a cork-borer from insecticide-free bean plants were immersed in different concentrations of insecticides for 10 sec. The leaf-discs were allowed to dry for 30 min on paper tissues and then were placed (with their abaxial surface up) on thin sterile agar layers (10 g/L) in 6mm Petri dishes. Fifteen <i>B. tabaci</i> adult individuals were transferred to each leaf-disc using a mouth aspirator and confined using a close-fitting ventilated lid. The lids were previously covered with mesh suitable for keeping whiteflies. Subsequently, the test units were transferred to a controlled condition (Nüve® Incubator, 25±2ᵒC, 70±5%RH, and 16L:8D). Test units, which were treated with only distilled water mixed with 0.1 g L-1 Triton X-100, were used as control. Mortality assays for control were conducted independently for each insecticide. Each concentration was replicated 10 times (150 adults for each concentration). Mortality was evaluated after 72 hrs following pesticide treatments using a binocular microscope. Whitefly individuals that were unable to flip themselves up or fly for a prolonged period of time were considered dead (Caballero, Cyman & Schuster, 2013).
DOI: 10.6084/m9.figshare.11341868.v1
title: Integrating the Physical and Genetic Map of Bread Wheat Facilitates the Detection of Chromosomal Rearrangements

description: High-density genetic map including FISH markers<br>
DOI: 10.6084/m9.figshare.11341868.v2
title: Integrating the Physical and Genetic Map of Bread Wheat Facilitates the Detection of Chromosomal Rearrangements

description: High-density genetic map including FISH markers<br>
DOI: 10.6084/m9.figshare.11341889.v1
title: dataset.Hermes.et.al.xlsx

description: HITChip data from Individual and cohort-specific gut microbiota patterns associated with tissue-specific insulin sensitivity in overweight and obese males. See README for details<br>
DOI: 10.6084/m9.figshare.11341889.v3
title: Data file

description: HITChip data from Individual and cohort-specific gut microbiota patterns associated with tissue-specific insulin sensitivity in overweight and obese males. See README for details<br>
DOI: 10.6084/m9.figshare.11341865.v2
title: 48hrs and 72hrs dose-percent response data.xlsx

description: <i>Bemisia tabaci</i> populations were collected from greenhouses located in Aydıncık, Kazanlı, Kocahasanlı, Silifke and Sipahili districts in southern Turkey (Mersin province). Three neonicotinoid insecticides—acetamiprid 207g/kg (Mospilan™, Sumi Agro Turkey, Istanbul, Turkey), imidacloprid 350 g L<sup>-1</sup> (Confidor™, Bayer Crop Sciences, Leverkusen, Germany), and thiamethoxam 240 g L<sup>-1</sup> (Actara™, Syngenta, Izmir, Turkey)—and three non-neonicotinoid insecticides—spinetoram 120 g L<sup>-1</sup> (Radiant™, Dow AgroSciences, Istanbul, Turkey), spinosad 480 g L<sup>-1</sup> (Laser™, Dow AgroSciences, Istanbul, Turkey), and sulfoxaflor 50% W/W (Transform™, Dow AgroSciences, Istanbul, Turkey)—were used in the bioassays. Serial dilutions were prepared for each insecticide using distilled water to determine population specific concentrations. A 0.1 g L<sup>-1</sup> Triton X-100 was included in the insecticide concentrations. A total of five to seven concentrations that caused nearly 10% to 95% mortality were determined (IRAC, https:// irac-online.org).The method described by the Insecticide Resistance Action Committee (IRAC) was used to determine the resistance status of whitefly populations (IRAC, https:// irac-online.org). Bean leaf-discs (3cm in diameter) that were cut using a cork-borer from insecticide-free bean plants were immersed in different concentrations of insecticides for 10 sec. The leaf-discs were allowed to dry for 30 min on paper tissues and then were placed (with their abaxial surface up) on thin sterile agar layers (10 g/L) in 6mm Petri dishes. Fifteen <i>B. tabaci</i> adult individuals were transferred to each leaf-disc using a mouth aspirator and confined using a close-fitting ventilated lid. The lids were previously covered with mesh suitable for keeping whiteflies. Subsequently, the test units were transferred to a controlled condition (Nüve® Incubator, 25±2ᵒC, 70±5%RH, and 16L:8D). Test units, which were treated with only distilled water mixed with 0.1 g L-1 Triton X-100, were used as control. Mortality assays for control were conducted independently for each insecticide. Each concentration was replicated 10 times (150 adults for each concentration). Mortality was evaluated after 72 hrs following pesticide treatments using a binocular microscope. Whitefly individuals that were unable to flip themselves up or fly for a prolonged period of time were considered dead (Caballero, Cyman & Schuster, 2013).
DOI: 10.6084/m9.figshare.11341889.v2
title: Data file

description: HITChip data from Individual and cohort-specific gut microbiota patterns associated with tissue-specific insulin sensitivity in overweight and obese males. See README for details<br>
DOI: 10.6084/m9.figshare.11341844
title: Supplementary Materials(Data of IEEE 33-bus and 123-bus test systems)

description: Bus and branch data for IEEE 33-bus and 123-bus test systems.
DOI: 10.6084/m9.figshare.11341865.v3
title: 48hrs and 72hrs dose-percent response data.xlsx

description: <i>Bemisia tabaci</i> populations were collected from greenhouses located in Aydıncık, Kazanlı, Kocahasanlı, Silifke and Sipahili districts in southern Turkey (Mersin province). Three neonicotinoid insecticides—acetamiprid 207g/kg (Mospilan™, Sumi Agro Turkey, Istanbul, Turkey), imidacloprid 350 g L<sup>-1</sup> (Confidor™, Bayer Crop Sciences, Leverkusen, Germany), and thiamethoxam 240 g L<sup>-1</sup> (Actara™, Syngenta, Izmir, Turkey)—and three non-neonicotinoid insecticides—spinetoram 120 g L<sup>-1</sup> (Radiant™, Dow AgroSciences, Istanbul, Turkey), spinosad 480 g L<sup>-1</sup> (Laser™, Dow AgroSciences, Istanbul, Turkey), and sulfoxaflor 50% W/W (Transform™, Dow AgroSciences, Istanbul, Turkey)—were used in the bioassays. Serial dilutions were prepared for each insecticide using distilled water to determine population specific concentrations. A 0.1 g L<sup>-1</sup> Triton X-100 was included in the insecticide concentrations. A total of five to seven concentrations that caused nearly 10% to 90% mortality were determined (IRAC, https:// irac-online.org).The method described by the Insecticide Resistance Action Committee (IRAC) was used to determine the resistance status of whitefly populations (IRAC, https:// irac-online.org). Bean leaf-discs (3cm in diameter) that were cut using a cork-borer from insecticide-free bean plants were immersed in different concentrations of insecticides for 10 sec. The leaf-discs were allowed to dry for 30 min on paper tissues and then were placed (with their abaxial surface up) on thin sterile agar layers (10 g/L) in 6mm Petri dishes. Fifteen <i>B. tabaci</i> adult individuals were transferred to each leaf-disc using a mouth aspirator and confined using a close-fitting ventilated lid. The lids were previously covered with mesh suitable for keeping whiteflies. Subsequently, the test units were transferred to a controlled condition (Nüve® Incubator, 25±2ᵒC, 70±5%RH, and 16L:8D). Test units, which were treated with only distilled water mixed with 0.1 g L-1 Triton X-100, were used as control. Mortality assays for control were conducted independently for each insecticide. Each concentration was replicated 10 times (150 adults for each concentration). Mortality was evaluated after 72 hrs following pesticide treatments using a binocular microscope. Whitefly individuals that were unable to flip themselves up or fly for a prolonged period of time were considered dead (Caballero, Cyman & Schuster, 2013). This data can be used to generate LC50, LC90, LC25 etc values through probit analysis.
DOI: 10.6084/m9.figshare.11341817
title: Neural correlates of social behavior in mushroom body extrinsic neurons of the honeybee Apis mellifera

description: Honey bee trajectories and neuronal activity of a few single units. Mushroom body output neurons. Bees in social context, hive like environment. Interesting for investigation of social interactions and their neuronal correlates.
DOI: 10.6084/m9.figshare.11341817.v1
title: Neural correlates of social behavior in mushroom body extrinsic neurons of the honeybee Apis mellifera

description: Honey bee trajectories and neuronal activity of a few single units. Mushroom body output neurons. Bees in social context, hive like environment. Interesting for investigation of social interactions and their neuronal correlates.
DOI: 10.6084/m9.figshare.11341778
title: Blood plasma lipidomics peak area data from 67 children with increased risk of type 1 diabetes and variable number of autoantibodies generated by targeted mass spectrometry

description: This dataset consists of a single Excel xlsx file containing peak area data for 128 lipid species detected by mass spectrometry from 67 children with increased risk of type 1 diabetes and different number of autoantibodies. <br>Individuals studied herein are participants in the DiabetesPrediction in Skåne Study, a prospective population-based study, following children from birth with the aim to investigate genetic and environmental factors that may contribute to the development of T1D. All participants were 10-15 years of age at the time of sampling and were healthy (no diabetes) with or without autoantibodies. <br>Lipid extracts were analyzed using an ultra-high-performance liquid chromatography quadrupole time-of-flight mass spectrometer (UHPLC-Q-TOF-MS) operated in the positive ion mode. The column was an Acquity UPLC™ BEH C18 2.1×100 mm with 1.7 µm particles from Waters (Milford, CT, USA).<br>This dataset contains raw peak area data for 128 lipid species across 11 classes. These classes and their abbreviations as used in the dataset are as follows:<br>* cholesteryl ester (CE),* ceramide (Cer),* lysophosphatidylcholine (LPC),* phosphatidylcholine (PC),* alkylphosphatidylcholine (PC(O)),* alkenylphosphatidylcholine (plasmalogen, PC(P)),* phosphatidylethanolamine (PE),* alkylphosphatidylethanolamine (PE(O)),* phosphatidylethanolamine plasmalogen (PE(P)),* phosphatidylinositol (PI),* sphingomyelin (SM),* triacylglycerol (TG),<br>Further analysis and explanation of these data are presented in the accompanying manuscript.
DOI: 10.6084/m9.figshare.11341778.v1
title: Blood plasma lipidomics peak area data from 67 children with increased risk of type 1 diabetes and variable number of autoantibodies generated by targeted mass spectrometry

description: This dataset consists of a single Excel xlsx file containing peak area data for 128 lipid species detected by mass spectrometry from 67 children with increased risk of type 1 diabetes and different number of autoantibodies. <br>Individuals studied herein are participants in the DiabetesPrediction in Skåne Study, a prospective population-based study, following children from birth with the aim to investigate genetic and environmental factors that may contribute to the development of T1D. All participants were 10-15 years of age at the time of sampling and were healthy (no diabetes) with or without autoantibodies. <br>Lipid extracts were analyzed using an ultra-high-performance liquid chromatography quadrupole time-of-flight mass spectrometer (UHPLC-Q-TOF-MS) operated in the positive ion mode. The column was an Acquity UPLC™ BEH C18 2.1×100 mm with 1.7 µm particles from Waters (Milford, CT, USA).<br>This dataset contains raw peak area data for 128 lipid species across 11 classes. These classes and their abbreviations as used in the dataset are as follows:<br>* cholesteryl ester (CE),* ceramide (Cer),* lysophosphatidylcholine (LPC),* phosphatidylcholine (PC),* alkylphosphatidylcholine (PC(O)),* alkenylphosphatidylcholine (plasmalogen, PC(P)),* phosphatidylethanolamine (PE),* alkylphosphatidylethanolamine (PE(O)),* phosphatidylethanolamine plasmalogen (PE(P)),* phosphatidylinositol (PI),* sphingomyelin (SM),* triacylglycerol (TG),<br>Further analysis and explanation of these data are presented in the accompanying manuscript.
DOI: 10.6084/m9.figshare.11341760
title: Data from 'DISENTANGLING FUNCTIONAL TRAIT VARIATION AND COVARIATION IN EPIPHYTIC LICHENS ALONG A CONTINENT-WIDE LATITUDINAL GRADIENT'

description: There are two spreadsheets: 'Data' and 'Metadata'. 'Data' contains the raw data used in 'Disentangling functional trait variation and covariation in epiphytic lichens along a continent-wide latitudinal gradient'. 'Metadata' includes the description of all the variables and units.
DOI: 10.6084/m9.figshare.11341727
title: Historical Data in Simulation(Data in France)

description: This dataset contains the solar irradiation, wind speed, PV and wind power output data in France during 2013-2016.
DOI: 10.6084/m9.figshare.11341679
title: Metadata record for: A large calibrated database of hand movements and grasps kinematics

description: This dataset contains key characteristics about the data described in the Data Descriptor A large calibrated database of hand movements and grasps kinematics. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br><br><br>Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.6084/m9.figshare.11341703
title: bugula_neritina_masked.fa

description: Masked genome
DOI: 10.6084/m9.figshare.11341703.v1
title: bugula_neritina_masked.fa

description: Masked genome
DOI: 10.6084/m9.figshare.11341661
title: Figure 1B and C

description: The data included here is used to report the finding that loss of SMCHD1 in shTRF2 depleted HeLa cells affects the telomere fusion frequency. The data is part of figure 1B and C of the following manuscript https://www.biorxiv.org/content/10.1101/669119v2<br><br>HeLaS2=EVHeLaSg2_30=SMCHD1 KO1HeLaSg3_35=SMCHD1 KO2<br>
DOI: 10.6084/m9.figshare.11341658
title: Figure 2B

description: The data included here is used to report the finding that loss of SMCHD1 in shTRF2 depleted HeLa cells affects the telomere fusion frequency. The data is part of figure 2B of the following manuscript https://www.biorxiv.org/content/10.1101/669119v2<br><br>HeLaS2=EVHeLaSg2_30=SMCHD1 KO1HeLaSg3_35=SMCHD1 KO2
DOI: 10.6084/m9.figshare.11341661.v1
title: Figure 1B and C

description: The data included here is used to report the finding that loss of SMCHD1 in shTRF2 depleted HeLa cells affects the telomere fusion frequency. The data is part of figure 1B and C of the following manuscript https://www.biorxiv.org/content/10.1101/669119v2<br><br>HeLaS2=EVHeLaSg2_30=SMCHD1 KO1HeLaSg3_35=SMCHD1 KO2<br>
DOI: 10.6084/m9.figshare.11341679.v2
title: Metadata record for: A large calibrated database of hand movements and grasps kinematics

description: This dataset contains key characteristics about the data described in the Data Descriptor A large calibrated database of hand movements and grasps kinematics. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br><br><br>Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.6084/m9.figshare.11341652
title: Figure 3_53BP1_IF-FISH

description: The data included here is used to report the finding that loss of SMCHD1 in shTRF2 depleted HeLa cells affects the DNA damage signalling. The data is part of figure 3B of the following manuscript https://www.biorxiv.org/content/10.1101/669119v2<br><br>HeLaS2=EVHeLaSg2_30=SMCHD1 KO1HeLaSg3_35=SMCHD1 KO2
DOI: 10.6084/m9.figshare.11341658.v1
title: Figure 2B

description: The data included here is used to report the finding that loss of SMCHD1 in shTRF2 depleted HeLa cells affects the telomere fusion frequency. The data is part of figure 2B of the following manuscript https://www.biorxiv.org/content/10.1101/669119v2<br><br>HeLaS2=EVHeLaSg2_30=SMCHD1 KO1HeLaSg3_35=SMCHD1 KO2
DOI: 10.6084/m9.figshare.11341679.v1
title: Metadata record for: A large calibrated database of hand movements and grasps kinematics

description: This dataset contains key characteristics about the data described in the Data Descriptor A large calibrated database of hand movements and grasps kinematics. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.11341652.v1
title: Figure 3_53BP1_IF-FISH

description: The data included here is used to report the finding that loss of SMCHD1 in shTRF2 depleted HeLa cells affects the DNA damage signalling. The data is part of figure 3B of the following manuscript https://www.biorxiv.org/content/10.1101/669119v2<br><br>HeLaS2=EVHeLaSg2_30=SMCHD1 KO1HeLaSg3_35=SMCHD1 KO2
DOI: 10.6084/m9.figshare.11341556
title: Design of novel primer sets for easy detection of <i>Ruegeria</i> species from seawater

description: Some coral-associated bacteria show protective roles for corals against pathogens. However, the distribution of coral-protecting bacteria in seawater is not well known. In addition, compared with the methods for investigating coral pathogens, few methods have been developed to detect coral-protecting bacteria. Here we prepared a simple method for detecting <i>Ruegeria</i> spp., some strains of which inhibit growth of the coral pathogen <i>Vibrio coralliilyticus</i>. We successfully obtained two <i>Ruegeria</i>-targeting primer sets through <i>in silico</i> and <i>in vitro</i> screening. The primer sets r38F-r30R and r445F-r446R, in addition to the newly designed universal primer set U357′F-U515′R, were evaluated <i>in vitro</i> using environmental DNA extracted from seawater collected in Osaka. These methods and primers should contribute to revealing the distribution of <i>Ruegeria</i> spp. in marine environments. This study provides an easy way of detecting specific bacteria in seawater or in DNA mixtures.
DOI: 10.6084/m9.figshare.11341556.v1
title: Design of novel primer sets for easy detection of <i>Ruegeria</i> species from seawater

description: Some coral-associated bacteria show protective roles for corals against pathogens. However, the distribution of coral-protecting bacteria in seawater is not well known. In addition, compared with the methods for investigating coral pathogens, few methods have been developed to detect coral-protecting bacteria. Here we prepared a simple method for detecting <i>Ruegeria</i> spp., some strains of which inhibit growth of the coral pathogen <i>Vibrio coralliilyticus</i>. We successfully obtained two <i>Ruegeria</i>-targeting primer sets through <i>in silico</i> and <i>in vitro</i> screening. The primer sets r38F-r30R and r445F-r446R, in addition to the newly designed universal primer set U357′F-U515′R, were evaluated <i>in vitro</i> using environmental DNA extracted from seawater collected in Osaka. These methods and primers should contribute to revealing the distribution of <i>Ruegeria</i> spp. in marine environments. This study provides an easy way of detecting specific bacteria in seawater or in DNA mixtures.
DOI: 10.6084/m9.figshare.11341493
title: Maternal care and juvenile feeding in a hyperiid amphipod (<i>Oxycephalus clausi</i> Bovallius, 1887) in association with gelatinous zooplankton

description: The manner of maternal care of the hyperiid amphipod, <i>Oxycephalus clausi</i>, was investigated at Senzaki, Nagato, Yamaguchi Prefecture, Japan. <i>In situ</i> observation underwater over a period of seven years as well as <i>in vitro</i> observation under laboratory conditions were conducted. Most of the amphipods (90.1%) were associated with gelatinous zooplankton. At least 13 species, including cnidarians, ctenophores, and salps hosted <i>O. clausi</i> amphipods. However, females presumably caring for demarsupiated juveniles were found only on the ctenophore <i>Ocyropsis fusca</i>, suggesting that <i>O. clausi</i> is selective in its choice of host species for reproduction. We also confirmed for the first time that <i>O. clausi</i> juveniles consume the surface tissue of the host ctenophore under laboratory conditions, indicating that they most likely prey on host tissue before leaving maternal care and then disperse from the host.
DOI: 10.6084/m9.figshare.11341487
title: Crustal growth of Eastern Dharwar Craton: a Neoarchean collisional orogeny?

description: Supplemental Table 1: Available age data for the magmatic rocks of Dharwar Craton
DOI: 10.6084/m9.figshare.11341493.v1
title: Maternal care and juvenile feeding in a hyperiid amphipod (<i>Oxycephalus clausi</i> Bovallius, 1887) in association with gelatinous zooplankton

description: The manner of maternal care of the hyperiid amphipod, <i>Oxycephalus clausi</i>, was investigated at Senzaki, Nagato, Yamaguchi Prefecture, Japan. <i>In situ</i> observation underwater over a period of seven years as well as <i>in vitro</i> observation under laboratory conditions were conducted. Most of the amphipods (90.1%) were associated with gelatinous zooplankton. At least 13 species, including cnidarians, ctenophores, and salps hosted <i>O. clausi</i> amphipods. However, females presumably caring for demarsupiated juveniles were found only on the ctenophore <i>Ocyropsis fusca</i>, suggesting that <i>O. clausi</i> is selective in its choice of host species for reproduction. We also confirmed for the first time that <i>O. clausi</i> juveniles consume the surface tissue of the host ctenophore under laboratory conditions, indicating that they most likely prey on host tissue before leaving maternal care and then disperse from the host.
DOI: 10.6084/m9.figshare.11341481
title: Crustal growth of Eastern Dharwar Craton: a Neoarchean collisional orogeny?

description: Supplemental Table 2: Geochemical compositions for the granitoids of Eastern Dharwar Craton (hybrid granites)
DOI: 10.6084/m9.figshare.11341484
title: Crustal growth of Eastern Dharwar Craton: a Neoarchean collisional orogeny?

description: Supplemental Table 3: Whole rock Sm–Nd isotopic data for the granitoids of Eastern Dharwar Craton
DOI: 10.6084/m9.figshare.11341481.v1
title: Crustal growth of Eastern Dharwar Craton: a Neoarchean collisional orogeny?

description: Supplemental Table 2: Geochemical compositions for the granitoids of Eastern Dharwar Craton (hybrid granites)
DOI: 10.6084/m9.figshare.11341487.v1
title: Crustal growth of Eastern Dharwar Craton: a Neoarchean collisional orogeny?

description: Supplemental Table 1: Available age data for the magmatic rocks of Dharwar Craton