cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48597/5v3u-9mz2
title: Measurement of Inorganics in air and particle phase at Zürich-Kaserne

description: Measurement of Inorganics in air and particle phase at Zürich-Kaserne
DOI: 10.48597/5yyu-jh8f
title: Measurement of Chromium at Mahón

description: Measurement of Chromium at Mahón
DOI: 10.48597/7emc-6qbc
title: Measurement of Chromium at Els Torms

description: Measurement of Chromium at Els Torms
DOI: 10.48597/7w3y-svrm
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/9dbs-n844
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/9sky-fhzp
title: Measurement of Ammonia at Campisabalos

description: Measurement of Ammonia at Campisabalos
DOI: 10.48597/a7yd-vmbn
title: Measurement of Inorganics in air and particle phase at Magadino-Cadenazzo

description: Measurement of Inorganics in air and particle phase at Magadino-Cadenazzo
DOI: 10.48597/arsm-u3e7
title: Measurement of Chromium at Víznar

description: Measurement of Chromium at Víznar
DOI: 10.48597/bsgr-vfdk
title: Measurement of Particle_number_size_distribution at Schauinsland

description: Measurement of Particle_number_size_distribution at Schauinsland
DOI: 10.48597/bvk2-sfkx
title: Measurement of Zinc at Els Torms

description: Measurement of Zinc at Els Torms
DOI: 10.48597/c358-hadr
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/dn8y-ayv5
title: Measurement of Ammonia at San Pablo de los Montes

description: Measurement of Ammonia at San Pablo de los Montes
DOI: 10.48597/dr98-srfm
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.48597/e75n-3xyh
title: Measurement of Chromium at Campisabalos

description: Measurement of Chromium at Campisabalos
DOI: 10.48597/egpc-47kg
title: Measurement of Zinc at Niembro

description: Measurement of Zinc at Niembro
DOI: 10.48597/f9kx-ksqu
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/fgxw-7gvp
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.15468/c2m9zk
title: Meroplankton in Isfjorden 2016 to 2017

description: ## Methods

### Study area
This dataset is the result of a sampling program in Isfjorden on the west coast of Spitsbergen, Svalbard.


### Time coverage 
The sampling was conducted in 2016 and 2017, with one sampling per season; summer and autumn in 2016 and winter and spring in 2017.


### Sampling

50 sea water samples were collected at two stations named "n1" and "s2".

On each sampling date three sampling protocols were used: 
- a fine net deployed horizontally by a diver (100 µm mesh)
- a specialized water pump (hoover/vacuum, 100 µm) deployed at a certain depth
- vertical plankton net tows (WP2-net, 65 µm).

Both the diver's net and vacuum pump sampled from 6 and 12 meters depth at each station, while the WP2-net sampled from 50 to 0 meters and from 12 to 0 meters depth. For station "s2", the sampling at 6 meters with a diver's net and vacuum pump was carried out in the autumn of 2017 and not together with the other sampling that occurred in the autumn of 2016.

## Taxonomy

The dataset was analysed using image analysis software (Ecotaxa) with subsequent expert validation.


## Data

## 
This dataset is built using a [fully automated processing pipeline](https://github.com/akvaplan-niva/gbif-no-darwin-core/blob/main/bin/ecotaxa-pipeline),
 using the
[ecotaxa-occurrences](https://github.com/akvaplan-niva/ecotaxa-darwin-core#ecotaxa-occurrences)

## Processing

https://doi.org/10.5281/zenodo.4700253

This dataset contains two Darwin Core distributions
- dwc-ndjson: Newline separated JSON (NDJSON)
- dwc-a: Darwin Core archive (TSV/XML)


command line tool.

Input data: [EcoTaxa raw data for project 818](https://ecotaxa.obs-vlfr.fr/prj/818), published at https://doi.org/10.5281/zenodo.4692116.



@todo GBIF

[Meroplankton in Isfjorden 2016 to 2017 – Darwin Core](https://doi.org/10.5281/zenodo.4700253) (v1.5.0-pre) is published by [Akvaplan-niva](https://akvaplan.niva.no) under a [Creative Commons Attribution 4.0 International License](https://creativecommons.org/licenses/by/4.0/).

GBIF ID: https://www.gbif.org/dataset/16c02403-3bca-59d2-b057-c0c40958827b
Version: 1.5.0-pre
Built: 2021-04-23T10:20:20.011Z


Akvaplan-niva. (2021). Meroplankton in Isfjorden 2016 to 2017 – raw data from EcoTaxa project 818 [Data set]. Zenodo. http://doi.org/10.5281/zenodo.4692116
DOI: 10.48597/fyry-5rsr
title: Measurement of Chromium at Els Torms

description: Measurement of Chromium at Els Torms
DOI: 10.48597/g3ct-b2m4
title: Measurement of Chromium at Víznar

description: Measurement of Chromium at Víznar
DOI: 10.48597/g449-sw3t
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/gfdz-gxw2
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.48597/ghhb-9mu3
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.48597/ha92-bhmu
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.48597/haee-agyd
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/hypu-3ujc
title: Measurement of Chromium at Mahón

description: Measurement of Chromium at Mahón
DOI: 10.48597/ktf5-asuw
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/m8g8-dkdk
title: Measurement of Ammonia at Niembro

description: Measurement of Ammonia at Niembro
DOI: 10.48597/me7x-jfmz
title: Measurement of Chromium at Campisabalos

description: Measurement of Chromium at Campisabalos
DOI: 10.48597/mf4j-hpsn
title: Measurement of Particle_number_size_distribution at Schauinsland

description: Measurement of Particle_number_size_distribution at Schauinsland
DOI: 10.48597/mugq-ryqq
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.48597/ncjg-t8xr
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/nmqe-gcxj
title: Measurement of Chromium at San Pablo de los Montes

description: Measurement of Chromium at San Pablo de los Montes
DOI: 10.48597/nu74-2c3e
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.48597/pdqu-kmvy
title: Measurement of Zinc at San Pablo de los Montes

description: Measurement of Zinc at San Pablo de los Montes
DOI: 10.48597/pzr5-n2ch
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.48597/qjzs-g424
title: Measurement of Chromium at Niembro

description: Measurement of Chromium at Niembro
DOI: 10.48597/qszp-afmx
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.48597/qudm-x5wa
title: Measurement of Zinc at Víznar

description: Measurement of Zinc at Víznar
DOI: 10.48597/rdtr-kg5q
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/sen9-fz8r
title: Measurement of Chromium at San Pablo de los Montes

description: Measurement of Chromium at San Pablo de los Montes
DOI: 10.48597/szek-zeqh
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/tyqq-b35t
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.48597/v5bp-wc4a
title: Measurement of Particle_number_size_distribution at Trollhaugen

description: Measurement of Particle_number_size_distribution at Trollhaugen
DOI: 10.48597/w35s-ys4j
title: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg

description: Measurement of Aerosol_absorption_coefficient at Cabauw Zijdeweg
DOI: 10.48597/w7k4-52bh
title: Measurement of Ammonia at Víznar

description: Measurement of Ammonia at Víznar
DOI: 10.15468/w273we
title: 2014 Marine Biological Association (MBA) Yealm River non-native species timed search

description: Timed searches undertaken by the Marine Biological Association (MBA) to search for non-native species in the Yealm Estuary. Searches primarily focused on the Pacific Oyster (Magallana gigas), although other non-natives were recorded. Abundance was primarily Present/Not present, but in some cases non-standard units of abundance (eg. Not common) were used.
DOI: 10.15468/uq8a3v
title: Bird skins from Jamaica in the collections of World Museum, National Museums Liverpool

description: Collection data for bird skins from Jamaica in the collections of World Museum, National Museums Liverpool
DOI: 10.6084/m9.figshare.14673984
title: Genome-wide identification evolution and expression of vestigial-like gene family in chicken

description: <i>Vestigial-like</i> (<i>Vgll</i>) genes are widespread in vertebrates and play an important role in muscle development. In this study, we used bioinformatics methods to systematically identify the chicken <i>VGLL</i> family in the whole genome and investigated its evolutionary history and gene structure features. Tissue expression spectra combined with real-time PCR data were used to analyze the organizational expression pattern of the genes. Based on the maximum likelihood method, a phylogenetic tree of the <i>VGLL</i> family was constructed, and 94 <i>VGLL</i> genes were identified in 24 breeds, among which four <i>VGLL</i> family genes were identified in the chicken genome. Ten motifs were detected in the <i>VGLL</i> genes, and the analysis of introns combined with gene structure revealed that the family was conserved during evolution. Tissue expression analysis suggested that the expression profiles of the <i>VGLL</i> family genes in 16 tissues differed between LU Shi and AA broilers. In addition, a single gene (<i>VGLL2</i>) showed increased expression in chickens at embryonic days 10–16 and was involved in the growth and development of skeletal muscle in chickens in the embryonic stage. In summary, <i>VGLL</i> genes are involved in chicken muscle growth and development, which provides useful information for subsequent functional studies of <i>VGLL</i> genes.
DOI: 10.6084/m9.figshare.14673984.v1
title: Genome-wide identification evolution and expression of vestigial-like gene family in chicken

description: <i>Vestigial-like</i> (<i>Vgll</i>) genes are widespread in vertebrates and play an important role in muscle development. In this study, we used bioinformatics methods to systematically identify the chicken <i>VGLL</i> family in the whole genome and investigated its evolutionary history and gene structure features. Tissue expression spectra combined with real-time PCR data were used to analyze the organizational expression pattern of the genes. Based on the maximum likelihood method, a phylogenetic tree of the <i>VGLL</i> family was constructed, and 94 <i>VGLL</i> genes were identified in 24 breeds, among which four <i>VGLL</i> family genes were identified in the chicken genome. Ten motifs were detected in the <i>VGLL</i> genes, and the analysis of introns combined with gene structure revealed that the family was conserved during evolution. Tissue expression analysis suggested that the expression profiles of the <i>VGLL</i> family genes in 16 tissues differed between LU Shi and AA broilers. In addition, a single gene (<i>VGLL2</i>) showed increased expression in chickens at embryonic days 10–16 and was involved in the growth and development of skeletal muscle in chickens in the embryonic stage. In summary, <i>VGLL</i> genes are involved in chicken muscle growth and development, which provides useful information for subsequent functional studies of <i>VGLL</i> genes.
DOI: 10.6084/m9.figshare.15198253.v1
title: Renal dysfunction is associated with lower odds of home discharge for patients with stroke

description: Studies on the association of estimated glomerular filtration rate (eGFR) levels with hospital discharge disposition after stroke are limited with inconsistent results. This study investigated the odds of home discharge with eGFR levels at admission for patients with stroke using the Taiwan Stroke Registry (TSR) data. From the TSR database, a total of 51,338 stroke patients from 2006 to 2015 were categorized into five groups based on eGFR levels at admission. The proportion of home discharge by the eGFR levels was calculated and logistic regression analysis was used to estimate the related odds ratio (OR) and 95% confidence interval. Near 85% of stroke patients were discharged to home. The proportion of home discharges decreased as the eGFR level declined. Compared to patients with eGFR ≥90 mL/min/1.73 m<sup>2</sup>, the adjusted ORs of home discharge were 0.91, 0.85, 0.63, 0.56 for patients with eGFR 60–89, eGFR 30–59, eGFR 15–29, and eGFR &lt; 15 mL/min/1.73 m<sup>2</sup> or on dialysis, respectively, in a graded relationship. The trends were consistent in the ischemic stroke and hemorrhagic stroke patients. The areas under the receiver operating characteristic curve for all stroke patients, ischemic stroke patients, and hemorrhagic stroke patients were 0.801, 0799, 0.815, respectively. The odds of home discharge for stroke patients decreased with a significant independent graded association with declining eGFR levels. Renal function could predict home discharge after stroke.
DOI: 10.15468/69aknu
title: 2020_nsmk_ypim_biodiversity_sp_390

description: National Science Museum 2020
Spider Resource Collection List
DOI: 10.15468/csfquc
title: Mammal Species of the World

description: The data in this checklist of mammal species of the world are being presented for non-commercial, personal, and collections management use only. Copying or redistributing these data in any manner for personal or corporate gain is not permitted. A list of the authors responsible for various portions of the text can be found here.
DOI: 10.15468/wvwubn
title: Orma Smith Museum of Natural History

description: The only natural history museum in the region encompassing southwestern Idaho, southeastern Oregon and northern Nevada, the Orma J. Smith Museum of Natural History is the premier resource for environmental and natural history education in the region. The Museum is listed in the "30 Most Amazing Higher Education Natural History Museums" list compiled by Best College Reviews. The Museum’s extensive collections and programs support the education of The College of Idaho students and the general public, as well as numerous research activities.
DOI: 10.15468/5q75cg
title: DMNS Cretaceous Vertebrates of Madagascar

description: The Madagascar Paleontology Project was initiated in 1993 to study the geologic and biogeographic history of Madagascar. Since then, there have been 14 highly successful expeditions to the island, uncovering thousands of Late Cretaceous fossils, most of which are now housed at the Denver Museum of Nature & Science. Our collections include fishes, frogs, turtles, lizards, snakes, crocodiles, birds, mammals, and dinosaurs. Today, researchers continue to study these fossils to describe and better understand the animals that were living in the Late Cretaceous of Madagascar.
DOI: 10.15468/k8z3b8
title: 2021_drib_smpl_in_1200

description: DASARI Research Institute of BioResources 2021
Insects Resource Collection List
DOI: 10.15468/sr19uv
title: Feral Pigs - Sightings and Cull records - 2017-2018

description: The dataset comprises records of wild boar or feral pigs reported by landowners and occupiers in Scotland during 2017-18.
DOI: 10.6084/m9.figshare.13101034.v1
title: Additional file 1 of A miR-182 variant and risk of hepatocellular carcinoma in a southern Chinese population

description: Additional file 1: Table 1S. The associations between miR-182 rs4541843 polymorphism and clinical features of HCC patients. Table 2S. Cox regression analysis of the prognosis of HCC Patients.
DOI: 10.6084/m9.figshare.14674094.v1
title: Interception efficiency of grate inlets for sustainable urban drainage systems design under different road slopes and approaching discharges

description: To quantify the discharge capacity of grate inlets causing urban flooding due to insufficient drainage capacity, 285 experiments for six grate inlets under different approaching discharges, transverse and longitudinal slopes conditions were conducted using 1:1 scale experiment. These experiments indicated: (1) A smaller approaching discharge or a larger transverse slope leads to a higher interception efficiency. The longitudinal slopes weakly influence the interception efficiency of parallel grate inlets. The parallel grate inlet is preferred for its much higher interception efficiency than vertical grate inlet. (2) Six interception efficiency formulas with clear physical meanings using dimensional analysis have been proposed. (3) The average errors of the six current formulas are −1.26%–8.2%. This study can guide the planning and design of urban drainage systems.
DOI: 10.6084/m9.figshare.12577037
title: Additional file 1 of A genome-wide survey of copy number variations reveals an asymmetric evolution of duplicated genes in rice

description: Additional file 1: Table S1. The summary of 93 representative rice accessions for whole genome re-sequencing, de novo assembling and RNA-Seq.
DOI: 10.6084/m9.figshare.12577052
title: Additional file 3 of A genome-wide survey of copy number variations reveals an asymmetric evolution of duplicated genes in rice

description: Additional file 3: Table S2. The copy number matrix of 93 rice accessions.
DOI: 10.6084/m9.figshare.12577052.v1
title: Additional file 3 of A genome-wide survey of copy number variations reveals an asymmetric evolution of duplicated genes in rice

description: Additional file 3: Table S2. The copy number matrix of 93 rice accessions.
DOI: 10.6084/m9.figshare.12577082.v1
title: Additional file 6 of A genome-wide survey of copy number variations reveals an asymmetric evolution of duplicated genes in rice

description: Additional file 6: Table S18. The statistics of correlation analysis. a for each gene, the TPM values were divided into groups by different copy numbers. Difference analysis were performed in R. If there was/were significant difference between at least two groups of TPM values, this gene was defined as Exp_diff gene. Table S19. The changes in the average rate of increase with the copy number gradient of positively correlated genes. Values are means ± s.d.. Table S20. The fate of duplicated genes. a corresponds to the pairs at least one copy pseudogenized. b-d correspond to the pairs at least one copy neo-functionalized, sub-functionalized, and neo-functionalized/sub-functionalized, respectively. e corresponds to the pairs whose copy numbers were in line with the assembly results of 93 rice accessions. Table S21. The number of copy specific reads. Table S22. Primers used in this study.
DOI: 10.6084/m9.figshare.12577109.v1
title: Additional file 11 of Diverse and unique viruses discovered in the surface water of the East China Sea

description: Additional file 11: Table S7. Global Positioning System (GPS) of the sample sites.
DOI: 10.6084/m9.figshare.12577064
title: Additional file 4 of A genome-wide survey of copy number variations reveals an asymmetric evolution of duplicated genes in rice

description: Additional file 4: Table S3. The tandem duplications identified around GL7 loci and the promotor of IPA1. a equal to Average_depthCNV/Average_depthChr. b the read with a insert size close to the length of the CNV. c the region within 500 bp upstream and downstream of the breakpoint were used to detect the discordant reads. Table S4. The copy number matrix of the 10 CNVs identified by qPCT. Table S5. Genes with high copy number (≥10) in more than 5 accessions. Table S6. The copy number matrices of 10 loci in 15 accessions called by CNVnator, Delly, and CtgRef-CNV. The DUP, DEL, and CN1 loci, were marked as yellow, purple, and green, respectively. Table S7. The weighted accuracies of three softwares based on the qPCT results of 10 loci in 15 accessions. Table S8. The comparisons of CNV results generated by three methods. Table S9. The accuracy of the selected 150 CNVs detected by CtgRef-CNV but not detected by CNVnator. Table S10. The accuracy of the selected 150 CNVs detected by CNVnator but not detected by CtgRef-CNV. Table S11. The comparison of CNVs between Yu et al. and present study. Table S12. The comparison of CNVs between Du et al. and present study. Table S13. The comparison of CNVs between Wang et al. (3 K rice genomes) and present study. Table S14. The comparison of CNVs between Fuentes et al. (3 K rice genomes) and present study.
DOI: 10.15468/2fmw36
title: 2009-present Marine Biological Association (MBA) South Devon and Cornwall Seine Net Fish Survey

description: A site at Mothecombe was surveyed using two different methods. Push netting and seine netting were carried out at Meadowsfoot Beach near Owens Point. The species caught, by both methods, were recorded to species level where possible. Both the frequency (count data) and the lengths of each individual were captured.
DOI: 10.6084/m9.figshare.13101192
title: Additional file 5 of LTBP1 plays a potential bridge between depressive disorder and glioblastoma

description: Additional file 5: Table S4. The overlapped genes of depressive and anxiety disorders.
DOI: 10.48597/y6xb-yur7
title: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg

description: Measurement of Particle_number_size_distribution at Cabauw Zijdeweg
DOI: 10.6084/m9.figshare.13101189
title: Additional file 4 of LTBP1 plays a potential bridge between depressive disorder and glioblastoma

description: Additional file 4: Table S3. Differentially expressed genes between high and low LTBP1 expression group.
DOI: 10.6084/m9.figshare.13101189.v1
title: Additional file 4 of LTBP1 plays a potential bridge between depressive disorder and glioblastoma

description: Additional file 4: Table S3. Differentially expressed genes between high and low LTBP1 expression group.
DOI: 10.48597/2exq-k586
title: Measurement of Total_gaseous_mercury at Schmücke

description: Measurement of Total_gaseous_mercury at Schmücke
DOI: 10.6084/m9.figshare.13101192.v1
title: Additional file 5 of LTBP1 plays a potential bridge between depressive disorder and glioblastoma

description: Additional file 5: Table S4. The overlapped genes of depressive and anxiety disorders.
DOI: 10.48597/2x6k-3pgx
title: Measurement of Pm25_mass at Payerne

description: Measurement of Pm25_mass at Payerne
DOI: 10.48597/395a-j4ak
title: Measurement of Nitrogen_dioxide at Chaumont

description: Measurement of Nitrogen_dioxide at Chaumont
DOI: 10.48597/3mfg-zykw
title: Measurement of Sum_nitric_acid_and_nitrate at Rigi

description: Measurement of Sum_nitric_acid_and_nitrate at Rigi
DOI: 10.48597/3mjj-nnju
title: Measurement of Potassium at Rigi

description: Measurement of Potassium at Rigi