cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3741095_d1.v1
title: Additional file 1: Figure S1. of The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion

description: Kernels harvested 3 DAP were assessed for growth on various concentrations of sucrose, glucose and fructose during long term culture (15 d). After sterilization, kernels were plated on MS agar and incubated in the dark at 24 °C. medium contained either only MS salts, or MS salts supplemented with 100, 200 or 300 mM sucrose, glucose or fructose as a carbon source. Individual kernels were weighed at day zero of culture and at day 15. (XLSX 225 kb)
DOI: 10.6084/m9.figshare.c.3741095_d1
title: Additional file 1: Figure S1. of The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion

description: Kernels harvested 3 DAP were assessed for growth on various concentrations of sucrose, glucose and fructose during long term culture (15 d). After sterilization, kernels were plated on MS agar and incubated in the dark at 24 °C. medium contained either only MS salts, or MS salts supplemented with 100, 200 or 300 mM sucrose, glucose or fructose as a carbon source. Individual kernels were weighed at day zero of culture and at day 15. (XLSX 225 kb)
DOI: 10.6084/m9.figshare.c.3741047_d10.v1
title: Additional file 9: Table S8. of Characterization of genome-wide segmental duplications reveals a common genomic feature of association with immunity among domestic animals

description: Fifty-nine human homologous genes detected in SD regions among five domestic species. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3741095_d2.v1
title: Additional file 2: Table S1. of The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion

description: Kernels harvested 3 DAP were assessed for the effect of long term (9 d) sucrose starvation on kernel growth (g−1 fw). After sterilization, B73 kernels were plated on MS agar and incubated in the dark at 24 °C. Control kernels on continuous sucrose are indicated by SUC (150 mM), and sucrose starved kernels are indicated by NS (no sucrose). Individual kernels from three seperate ears were weighed each day and returned to the medium. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3741059_d11.v1
title: Additional file 1: of sRNAs as possible regulators of retrotransposon activity in Cryptococcus gattii VGII

description: Retrotransposon sequence list from all 17 C. gattii strains. The retrotransposon list contains detailed descriptions of molecular type, C. gattii strain, NCBI reference for supercontig, sequence coordinates, LTR retrotransposon family and domains; as well as, the annotation of orthologous sequences in WM276 and R265 strains. The synteny analysis columns indicate presence (“YES”) and absence (“NO”) of synteny; and “NA” to not analyzed data. (XLS 118 kb)
DOI: 10.6084/m9.figshare.c.3741047_d10
title: Additional file 9: Table S8. of Characterization of genome-wide segmental duplications reveals a common genomic feature of association with immunity among domestic animals

description: Fifty-nine human homologous genes detected in SD regions among five domestic species. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3741059_d11
title: Additional file 1: of sRNAs as possible regulators of retrotransposon activity in Cryptococcus gattii VGII

description: Retrotransposon sequence list from all 17 C. gattii strains. The retrotransposon list contains detailed descriptions of molecular type, C. gattii strain, NCBI reference for supercontig, sequence coordinates, LTR retrotransposon family and domains; as well as, the annotation of orthologous sequences in WM276 and R265 strains. The synteny analysis columns indicate presence (“YES”) and absence (“NO”) of synteny; and “NA” to not analyzed data. (XLS 118 kb)
DOI: 10.6084/m9.figshare.c.3741095_d2
title: Additional file 2: Table S1. of The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion

description: Kernels harvested 3 DAP were assessed for the effect of long term (9 d) sucrose starvation on kernel growth (g−1 fw). After sterilization, B73 kernels were plated on MS agar and incubated in the dark at 24 °C. Control kernels on continuous sucrose are indicated by SUC (150 mM), and sucrose starved kernels are indicated by NS (no sucrose). Individual kernels from three seperate ears were weighed each day and returned to the medium. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3741101_d1.v1
title: Additional file 1: of Predominance and association risk of Blastocystis hominis subtype I in colorectal cancer: a case control study

description: Raw results data of different patient groups. Description of data: The original numbers and information of different groups of investigated patients along with the raw data of the obtained results. (XLSX 50Â kb)
DOI: 10.6084/m9.figshare.c.3741095_d5
title: Additional file 5: Figure S3. of The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion

description: Effect of sucrose starvation on in vitro cultured kernels (3 DAP). Kernels were excised from field grown maize plants 3 days after pollination. After sterilization, kernels were plated on MS agar and incubated in the dark at 24 °C. Control kernels on continuous sucrose (150 mM) are indicated with closed (black) squares and sucrose starved kernels are indicated by white (open) squares. The shaded area highlights the 48 h period of starvation, and the unshaded area indicates the period on recovery on sucrose. Means are calculated using 4 biological replicates consisting of 3 plants each, and significance as reported by the Student’s T-test is at α = 0.05. (XLSX 85 kb)
DOI: 10.6084/m9.figshare.c.3741113_d3.v1
title: Additional file 3: of Homology to peptide pattern for annotation of carbohydrate-active enzymes and prediction of function

description: Hotpep functional prediction of 8812 experimentally characterized enzymes. This file includes experimental activity data from the CAZy database compared to Hotpep predictions for 8812 carbohydrate-active enzymes. (XLSX 235 kb)
DOI: 10.6084/m9.figshare.c.3741113_d3
title: Additional file 3: of Homology to peptide pattern for annotation of carbohydrate-active enzymes and prediction of function

description: Hotpep functional prediction of 8812 experimentally characterized enzymes. This file includes experimental activity data from the CAZy database compared to Hotpep predictions for 8812 carbohydrate-active enzymes. (XLSX 235 kb)
DOI: 10.6084/m9.figshare.c.3741095_d6.v1
title: Additional file 6: Table S3. of The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion

description: Heat map of correlation coefficients between Tre6P levels and gene expression. Coefficients of correlation were determined for control kernels continuously fed sucrose, and kernels starved for 48Â h using a Pearson comparison test (n-4). Positive correlations are indicated by shades of blue and negative correlations are indicated by shades of red. (XLSX 11 kb)
DOI: 10.15468/dl.3yrgvd
title: Occurrence Download

description: A dataset containing 1159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chelidonichthys lastoviza (Bonnaterre, 1788)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 1159 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038440-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3741113_d4.v1
title: Additional file 4: of Homology to peptide pattern for annotation of carbohydrate-active enzymes and prediction of function

description: Comparison of Hotpep annotation from genomes and from predicted proteins. This file includes the results of Hotpep annotation of carbohydrate-active enzymes in seven fungal genomes and in the predicted proteins from the genomes. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3741095_d6
title: Additional file 6: Table S3. of The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion

description: Heat map of correlation coefficients between Tre6P levels and gene expression. Coefficients of correlation were determined for control kernels continuously fed sucrose, and kernels starved for 48Â h using a Pearson comparison test (n-4). Positive correlations are indicated by shades of blue and negative correlations are indicated by shades of red. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3741113_d4
title: Additional file 4: of Homology to peptide pattern for annotation of carbohydrate-active enzymes and prediction of function

description: Comparison of Hotpep annotation from genomes and from predicted proteins. This file includes the results of Hotpep annotation of carbohydrate-active enzymes in seven fungal genomes and in the predicted proteins from the genomes. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3741095_d7.v1
title: Additional file 7: Figure S4. of The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion

description: Maize kernel culture. Kernels were prepared by hand excision of the center one-third of 3 DAP ears (A), and removal of kernels and a small portion of cob tissue (B), maintaining sufficient cob tissue to permit nutrients to be taken up by the immature kernel. Immature kernels were sterilized and grown in sucrose rich (150 mM Sucrose, 1% MS agar), or sucrose deficient media (1% MS agar) on petri dishes with equal spacing to ensure that there was equal competition for nutrients (C). Embryos were kept at 24 °C in the dark for 48 h, then transferred to plates with sucrose for another 48 h. Replicate samples are removed every 8–12 h, kernels were removed from cob tissue (D & E), weighed, and immediately frozen in liquid N2. (XLSX 310 kb)
DOI: 10.6084/m9.figshare.c.3741131_d2.v1
title: Additional file 2: of MUC1 in lung adenocarcinoma: cross-sectional genetic and serological study

description: The dataset supporting the conclusions of this article is available in this datasheet. (XLS 133Â kb)
DOI: 10.6084/m9.figshare.c.3741128_d3
title: MOESM3 of Differential DNA methylation at conserved non-genic elements and evidence for transgenerational inheritance following developmental exposure to mono(2-ethylhexyl) phthalate and 5-azacytidine in zebrafish

description: Additional file 3. A Microsoft Excel spreadsheet that contains all the DMRs and IPA output for MEHP.
DOI: 10.6084/m9.figshare.c.3741131_d2
title: Additional file 2: of MUC1 in lung adenocarcinoma: cross-sectional genetic and serological study

description: The dataset supporting the conclusions of this article is available in this datasheet. (XLS 133Â kb)
DOI: 10.6084/m9.figshare.c.3741128_d4.v1
title: MOESM4 of Differential DNA methylation at conserved non-genic elements and evidence for transgenerational inheritance following developmental exposure to mono(2-ethylhexyl) phthalate and 5-azacytidine in zebrafish

description: Additional file 4. A Microsoft Excel spreadsheet that contains all the DMRs and IPA output for 5AC.
DOI: 10.6084/m9.figshare.c.3741128_d4
title: MOESM4 of Differential DNA methylation at conserved non-genic elements and evidence for transgenerational inheritance following developmental exposure to mono(2-ethylhexyl) phthalate and 5-azacytidine in zebrafish

description: Additional file 4. A Microsoft Excel spreadsheet that contains all the DMRs and IPA output for 5AC.
DOI: 10.6084/m9.figshare.c.3741140_d1.v1
title: Additional file 1: Table S1. of QTL mapping for fruit quality in Citrus using DArTseq markers

description: DArTseq dataset used for BLASTN analysis to compare the integrated linkage map constructed with the Citrus sinensis reference genome. (XLSX 38Â kb)
DOI: 10.6084/m9.figshare.c.3741143_d1.v1
title: MOESM1 of Rationale and design of a multicenter placebo-controlled double-blind randomized trial to evaluate the effect of empagliflozin on endothelial function: the EMBLEM trial

description: Additional file 1. Blood examination.
DOI: 10.6084/m9.figshare.c.3741140_d1
title: Additional file 1: Table S1. of QTL mapping for fruit quality in Citrus using DArTseq markers

description: DArTseq dataset used for BLASTN analysis to compare the integrated linkage map constructed with the Citrus sinensis reference genome. (XLSX 38Â kb)
DOI: 10.6084/m9.figshare.c.3741143_d1
title: MOESM1 of Rationale and design of a multicenter placebo-controlled double-blind randomized trial to evaluate the effect of empagliflozin on endothelial function: the EMBLEM trial

description: Additional file 1. Blood examination.
DOI: 10.15468/dl.528rkt
title: Occurrence Download

description: A dataset containing 3386 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chelidonichthys lucerna (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 3386 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038441-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3741110_d16
title: Additional file 2: Table S1. of Defining the transcriptomic landscape of the developing enteric nervous system and its cellular environment

description: List of differentially expressed genes between the two cell populations of the intestine. The list in the first sheet represents all the genes filtered based on their adjusted p-value (cutoff is 0.01) while the second sheet shows the genes further filtered based on log2foldchange (1.5). Sheets 3 and 4 show the separated gene lists from the second sheet into upregulated genes in the neuronal cells and downregulated genes in the neuronal cell population, respectively. The scatter plot and the heat map in the main paper (Fig.Â 3c and d) were generated using the data provided in this table. (XLSX 3109 kb)
DOI: 10.6084/m9.figshare.c.3741188_d2.v1
title: Additional file 2: of Enrichment of in vivo transcription data from dietary intervention studies with in vitro data provides improved insight into gene regulation mechanisms in the intestinal mucosa

description: Table S2. The expression data, and derived list of DEGs, used for functional analysis of the ZnO, rye and amoxicillin in vivo, and IPEC-J2 in vitro interventions. (XLSX 292Â kb)
DOI: 10.6084/m9.figshare.c.3741188_d2
title: Additional file 2: of Enrichment of in vivo transcription data from dietary intervention studies with in vitro data provides improved insight into gene regulation mechanisms in the intestinal mucosa

description: Table S2. The expression data, and derived list of DEGs, used for functional analysis of the ZnO, rye and amoxicillin in vivo, and IPEC-J2 in vitro interventions. (XLSX 292Â kb)
DOI: 10.6084/m9.figshare.c.3741188_d4.v1
title: Additional file 4: of Enrichment of in vivo transcription data from dietary intervention studies with in vitro data provides improved insight into gene regulation mechanisms in the intestinal mucosa

description: Table S4a In vitro and in vivo DEGs associated with PAK-mediated steering of cell adhesion, adherence and tight junction processes. Table S4b Pathway mapping of in vitro and in vivo DEGs associated mediated PAK-mediated steering of cell adhesion/adherence and tight junction processes. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3741188_d3.v1
title: Additional file 3: of Enrichment of in vivo transcription data from dietary intervention studies with in vitro data provides improved insight into gene regulation mechanisms in the intestinal mucosa

description: Table S3. Full names of overlapping DEGs expressed in vivo and in vitro ZnO, rye and amoxicillin interventions. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3741188_d3
title: Additional file 3: of Enrichment of in vivo transcription data from dietary intervention studies with in vitro data provides improved insight into gene regulation mechanisms in the intestinal mucosa

description: Table S3. Full names of overlapping DEGs expressed in vivo and in vitro ZnO, rye and amoxicillin interventions. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3741188_d4
title: Additional file 4: of Enrichment of in vivo transcription data from dietary intervention studies with in vitro data provides improved insight into gene regulation mechanisms in the intestinal mucosa

description: Table S4a In vitro and in vivo DEGs associated with PAK-mediated steering of cell adhesion, adherence and tight junction processes. Table S4b Pathway mapping of in vitro and in vivo DEGs associated mediated PAK-mediated steering of cell adhesion/adherence and tight junction processes. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3741191_d2.v1
title: Additional file 2: of A few of my favorite things: circumscribed interests in autism are not accompanied by increased attentional salience on a personalized selective attention task

description: Raw data from experiment 1.
DOI: 10.6084/m9.figshare.c.3741191_d4.v1
title: Additional file 4: of A few of my favorite things: circumscribed interests in autism are not accompanied by increased attentional salience on a personalized selective attention task

description: Raw data from the PASSION questionnaire.
DOI: 10.6084/m9.figshare.c.3741191_d3
title: Additional file 3: of A few of my favorite things: circumscribed interests in autism are not accompanied by increased attentional salience on a personalized selective attention task

description: Raw data from experiment 2.
DOI: 10.6084/m9.figshare.c.3742262_d2.v1
title: Additional file 2: of Transcriptomic evidence of a para-inflammatory state in the middle aged lumbar spinal cord

description: Up and down modulated genes. Description: all genes significantly up or down modulated in LSC comparing young to middle-aged LSC. (XLSX 445Â kb)
DOI: 10.6084/m9.figshare.c.3742262_d2
title: Additional file 2: of Transcriptomic evidence of a para-inflammatory state in the middle aged lumbar spinal cord

description: Up and down modulated genes. Description: all genes significantly up or down modulated in LSC comparing young to middle-aged LSC. (XLSX 445Â kb)
DOI: 10.6084/m9.figshare.c.3742262_d3.v1
title: Additional file 3: of Transcriptomic evidence of a para-inflammatory state in the middle aged lumbar spinal cord

description: Differentially expressed gene set. Description: all annotated genes included in the differentially expressed gene set that were included in the pathway analysis. (XLSX 38Â kb)
DOI: 10.6084/m9.figshare.c.3742262_d3
title: Additional file 3: of Transcriptomic evidence of a para-inflammatory state in the middle aged lumbar spinal cord

description: Differentially expressed gene set. Description: all annotated genes included in the differentially expressed gene set that were included in the pathway analysis. (XLSX 38Â kb)
DOI: 10.6084/m9.figshare.c.3742286_d1.v1
title: Additional file 1: of goSTAG: gene ontology subtrees to tag and annotate genes within a set

description: GMT file containing the gene symbols from the cancer therapeutics gene expression DEGs. (GMT 114Â kb)
DOI: 10.15468/dl.7q4uks
title: Occurrence Download

description: A dataset containing 926 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chelidonichthys obscurus (Walbaum, 1792)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 926 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038442-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14511333
title: Masyarakat Era Digital dan Pengaruhnya Terhadap Nilai-Nilai Budaya Tradisional

description: Masyarakat era digital telah membawa perubahan signifikan dalam berbagai aspek kehidupan, termasuk cara berinteraksi, bekerja, dan berkomunikasi. Pengaruh perkembangan teknologi informasi dan komunikasi, seperti internet dan media sosial, telah mengubah pola pikir dan perilaku masyarakat secara global. Namun, perubahan ini juga menimbulkan tantangan terhadap pelestarian nilai-nilai budaya tradisional yang telah lama menjadi bagian integral dari identitas suatu bangsa. Abstrak ini bertujuan untuk mengkaji pengaruh masyarakat era digital terhadap nilai-nilai budaya tradisional, dengan menyoroti pergeseran nilai, norma, serta cara-cara tradisional yang mulai tergantikan oleh budaya digital. Dalam proses digitalisasi, terdapat kecenderungan masyarakat untuk lebih mengutamakan kemudahan akses informasi dan kecepatan komunikasi, yang kadang-kadang mengesampingkan nilai-nilai budaya lokal seperti gotong royong, etika dalam berinteraksi, dan penghargaan terhadap tradisi. Di sisi lain, era digital juga memberikan peluang bagi pelestarian budaya tradisional melalui media digital, memungkinkan budaya lokal untuk lebih dikenal dan dihargai secara global. Penelitian ini diharapkan dapat memberikan pemahaman tentang dinamika antara modernitas dan tradisi dalam masyarakat yang semakin dipengaruhi oleh teknologi, serta memberikan wawasan tentang bagaimana menjaga keseimbangan antara kemajuan zaman dan pelestarian budaya.
DOI: 10.5281/zenodo.14511334
title: Masyarakat Era Digital dan Pengaruhnya Terhadap Nilai-Nilai Budaya Tradisional

description: Masyarakat era digital telah membawa perubahan signifikan dalam berbagai aspek kehidupan, termasuk cara berinteraksi, bekerja, dan berkomunikasi. Pengaruh perkembangan teknologi informasi dan komunikasi, seperti internet dan media sosial, telah mengubah pola pikir dan perilaku masyarakat secara global. Namun, perubahan ini juga menimbulkan tantangan terhadap pelestarian nilai-nilai budaya tradisional yang telah lama menjadi bagian integral dari identitas suatu bangsa. Abstrak ini bertujuan untuk mengkaji pengaruh masyarakat era digital terhadap nilai-nilai budaya tradisional, dengan menyoroti pergeseran nilai, norma, serta cara-cara tradisional yang mulai tergantikan oleh budaya digital. Dalam proses digitalisasi, terdapat kecenderungan masyarakat untuk lebih mengutamakan kemudahan akses informasi dan kecepatan komunikasi, yang kadang-kadang mengesampingkan nilai-nilai budaya lokal seperti gotong royong, etika dalam berinteraksi, dan penghargaan terhadap tradisi. Di sisi lain, era digital juga memberikan peluang bagi pelestarian budaya tradisional melalui media digital, memungkinkan budaya lokal untuk lebih dikenal dan dihargai secara global. Penelitian ini diharapkan dapat memberikan pemahaman tentang dinamika antara modernitas dan tradisi dalam masyarakat yang semakin dipengaruhi oleh teknologi, serta memberikan wawasan tentang bagaimana menjaga keseimbangan antara kemajuan zaman dan pelestarian budaya.
DOI: 10.6084/m9.figshare.c.3742268_d14
title: Additional file 5: Table S2. of The KrĂźppel-like factor 9 cistrome in mouse hippocampal neurons reveals predominant transcriptional repression via proximal promoter binding

description: Genomic locations of all Klf9 ChSP peaks identified in HT22 [BirA/FLBIO-Klf9] cells based on coordinates of the mouse genome mm10 build. (XLSX 316Â kb)
DOI: 10.6084/m9.figshare.c.3742268_d14.v1
title: Additional file 5: Table S2. of The KrĂźppel-like factor 9 cistrome in mouse hippocampal neurons reveals predominant transcriptional repression via proximal promoter binding

description: Genomic locations of all Klf9 ChSP peaks identified in HT22 [BirA/FLBIO-Klf9] cells based on coordinates of the mouse genome mm10 build. (XLSX 316Â kb)