cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19513693.v1
title: WLTOG: An optimization approach for wild large-range target omnidirectional geolocation based on monocular PTZ camera

description: As an omnidirectional monocular camera, the pan-tilt-zoom (PTZ) camera has been widely employed in urban governance, forest fire protection, traffic supervision due to its omnidirectional coverage and inexpensive cost. Traditional monocular camera geolocation research focuses on small-range geolocation with a central projection camera under ideal conditions, making it difficult to meet the requirements of omnidirectional coverage and large-range geolocation for PTZ cameras. In view of this, this paper proposed a wild large-range target omnidirectional geolocation (WLTOG) algorithm. Firstly, the WLTOG algorithm transforms the target in a single image to the camera's visual center, obtaining the camera posture value. Then, it fits the nonlinear mapping relationship between multiple pairs of PTZ camera postures and the geospatial coordinates by using high-dimensional overdetermined equation, and finally realizes the bidirectional calculation between pixel coordinates and geospatial coordinates. The experimental PTZ camera is mounted on a communication tower in wild hilly environment. This method can be used to construct an omnidirectional geolocation relationship that meets the requirements of omnidirectional geolocation within 945m based on unknown accurate internal and external orientation elements, and low requirements for wild hardware installation. The WLTOG algorithm is conducive to the geometric measurement of a single image, GIS-augmented video surveillance, and 3D object recognition.
DOI: 10.15468/dl.9uxu8u
title: Occurrence Download

description: A dataset containing 1006 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Panorpa germanica Linnaeus, 1758"
 ]
}

 The dataset includes 1006 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009488-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21942/uva.16834114.v2
title: Ahead brain 122017 - 3D reconstructions

description: A multimodal 3D reconstruction of the whole human brain at a 200 micrometer scale created by fusing ultra-high field MRI and light microscopy.<br>This repository includes the microscopy stains and MRI contrasts co-registered to the 200 um blockface image.<br><br><br>
DOI: 10.6084/m9.figshare.19499153.v1
title: patches and local annotations, slide 077, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.21521007.v1
title: Supplemental File 12- Plasmid Sequences

description: Plasmids used in this study and described in the manuscript
DOI: 10.6084/m9.figshare.7718072.v1
title: Supplementary Material for: Associations of High Intensities on Magnetization-Prepared Rapid Acquisition with Gradient Echo with Aortic Complicated Lesions in Ischemic Stroke Patients

description: <b><i>Background:</i></b> Aortic complicated lesions (ACLs) are key parameters for evaluating aortic embolic sources in embolic stroke, and are usually diagnosed using transesophageal echocardiography (TEE). However, alternative methods for diagnosing ACLs have not been well established. We investigated associations between high-intensity areas on T1-weighted imaging (T1WI) with magnetization-prepared rapid acquisition with gradient echo (MPRAGE) and ACLs on TEE among ischemic stroke patients. <b><i>Methods:</i></b> Participants comprised 135 patients (mean age, 71 years; 35 women) with ischemic stroke or transient ischemic attack who underwent TEE for evaluation of embolic sources and plaque imaging using MPRAGE for evaluation of aortic or carotid plaques. Aortic plaque with signal intensity ≥200% of sternocleidomastoid intensity on MPRAGE was categorized as “high intensity”. ACLs on TEE were defined by focal increases in intima-media thickness (IMT) ≥4.0 mm or the presence of ulcerated or mobile plaques. <b><i>Results:</i></b> Fifty-six patients (42%) showed high-intensity areas on MPRAGE at the aortic arch. Aortic maximum IMT was significantly higher in patients with high intensities than in those without (<i>p</i> &lt; 0.001). Incidences of ACLs (66 vs. 20%, <i>p</i> &lt; 0.001) or ulcerated or mobile plaques (30 vs. 6%, <i>p</i> &lt; 0.001) were significantly higher in patients with high intensities than in patients without. Multivariable logistic regression analysis showed that high intensities on MPRAGE were independently associated with the presence of ACLs (OR 5.72; 95% CI 2.38–13.70) and ulcerated or mobile plaques (OR 4.18; 95% CI 1.29–13.50). <b><i>Conclusions:</i></b> High intensities on T1WI with MPRAGE in the aortic arch were significantly associated with the presence of ACLs. An evaluation of the aortic arch using MPRAGE may be useful for predicting ACLs.
DOI: 10.6084/m9.figshare.25309219.v1
title: Behavioral and neural correlates of social hierarchy formation in a sex-changing fish

description: Social hierarchies in sex-changing fish determine which fish will change sex, yet the complexities of hierarchy formation at the neurobehavioral level are still being unraveled. Here, we investigate the formation of social hierarchies within groups of New Zealand spotty wrasse, integrating behavioral observations with neural activation patterns upon social disruption. We find that dominance hierarchies form linearly based on size, with larger fish displaying more dominant behaviors and smaller fish displaying more submissive behaviors. Disruption of the social hierarchy induced rapid behavioral changes, particularly in second-ranked fish, highlighting that second-ranked fish will opportunistically adopt a dominant position. Analysis of neural activation patterns reveals that the social decision-making network is deeply involved in the establishment of dominance, with the fish attaining dominance showing significant differences to all other ranked fish. Overall, this study underscores the complexity of social relationships and their neural underpinnings in the spotty wrasse, providing a foundation for further research into the cellular and molecular mechanisms of socially-controlled sex change, and demonstrates that disruption of the social hierarchy triggers rapid changes in both behavior and the social decision-making regions of the brain.
DOI: 10.6084/m9.figshare.28183385.v1
title: Data etude IRIS

description: This study is a mixed method used to determine patients suffering from cardiovascualr diseases's adherence and persistence in an economic crisis setting
DOI: 10.6084/m9.figshare.28108013.v1
title: Redefining the pathways in the basilar pons. The pontine homunculus; the transverse fibres of the pons

description: Instructions:1) Download FAC, specimen 1 - 4 for the human specimens and FAC Macaca Mulatta / fractional anisotropy maps and run with 3D slicer for neuronavigation in transverse, sagittal, coronal planes.2) Download:program-data package for DSI STUDIO (https://dsi-studio.labsolver.org/download.html) and for 3D slicer (https://download.slicer.org/).Method:Diffusion tractography was performed on human specimen One from Duke University using DSI Studio (http://dsi-studio.labsolver.org/). A high-angular resolution diffusion MR imaging (HARDI) scheme was used, and a total of 120 diffusion sampling directions were acquired. The b-value was 4000 s/mm<sup>2</sup>. The in-plane resolution and the slice thickness were both 0.2 mm. The diffusion tensor was calculated.Download fib file (Reg_S64550_nii4d.nii.gz.src.gz.012fx.dti.fib) and Browse/open it with dsi studio. Double click on fib file to open. Open yellow folder in the Region Window of dsi studio and upload nodif_brain_mask.nii.gz file to render the tracts with an anatomical background GRE.Download and open with yellow folder in Tract list in dsi studio script for the descending and transverse fibres of the pons.trkData created in the Duke Center for In Vivo Microscopy (CIVM). Post-processing, MRI Analysis, tractography and study conducted at UNSW. Dr Christodoulos Skliros.Reference:Principles of organisation within the pathways in the brainstem and thalamus. UNSW 2022.https://doi.org/10.26190/unsworks/24097<br>
DOI: 10.6084/m9.figshare.14039816.v1
title: Tionesta six year biomass change

description: Excel spreadsheet containing plot numbers, and 1987 and 1993 aboveground biomass from the Tionesta forest of northwest Pennsylvania.
DOI: 10.6084/m9.figshare.22310038.v1
title: Supplementary Material for: Degradation of Ubiquitin-Editing Enzyme A20 following Autophagy Activation Promotes RNF168 Nuclear Translocation and NF-κB Activation in Lupus Nephritis

description: The correlation between ubiquitin-editing enzyme A20 and E3 ubiquitin ligase ring finger protein (RNF) 168 has been reported to be critical for repair of DNA damage. This study aimed to evaluate the potential role of this regulatory interaction in the pathogenesis of lupus nephritis (LN). The expression of RNF168 and A20 was measured in the podocytes derived from MRL/lpr murine lupus as well as patients with LN. Cell-based studies using renal podocytes bearing silenced RNF168, over-expressed A20, autophagy-related gene (Atg) 5 (a ubiquitin-like modifier), or silenced Atg5 were used to assess the effect of RNF168, A20, and Atg5 on DNA damage repair and nuclear factor kappa-B (NF-κB) activation in LN. It was found that podocyte autophagy was over-activated in LN and the abnormal podocyte autophagy led to down-regulation of A20, up-regulation of RNF168, and activation of the NF-κB. RNF168 silencing or A20 restoration inhibited activation of NF-κB pathway and promoted repair of DNA damage, where the level of autophagy was not changed. Activated A20 in podocytes weakened the promoting action of cell autophagy on RNF168. The current results suggest that RNF168 dysfunction may be involved in the pathogenesis of LN via down-regulation of A20 expression. Autophagy and RNF168 may be therapeutic targets for the prevention and treatment of LN.
DOI: 10.6084/m9.figshare.27165414.v3
title: Dataset for Healing and frictional behavior of the southern San Andreas fault reveals ability to host shallow slow slip events

description: Matlab data reduction file (Shreedharan), raw data files, and reduced data files for experiments. readme.txt describes input values for reduction file and output columns of .mat files.
DOI: 10.6084/m9.figshare.12563594.v1
title: JVASP-53233 to JVASP-55028

description: JARVIS-DFT
DOI: 10.21954/ou.rd.13560473.v1
title: Data from 'energy behaviour diaries' for 9 heritage building case studies

description: The data set comprises the digitised data from energy behaviour diaries produced by nine heritage building case studies. <br>Each case study has two diaries, a summer version and a winter version. <br>Each diary includes information on heating, lighting and ventilation settings and changes. Residents' activities, locations in their buildings and clothing levels.<br>Participants were also provided with two digital thermometers which record maximum, minimum and current temperatures. One thermometer was placed outside the building, in a sheltered location not in direct sunlight. The other thermometer was placed in participants' main living spaces away from any heat emitters. The thermometers were checked once a day, all three values noted down and then the memory function reset. <br>The data from the diaries has been digitised and included in an excel spreadsheet. Also included are digital copies of the diaries that were presented to participants for their completion. <br>
DOI: 10.6084/m9.figshare.8074964.v1
title: Combined genetic and epigenetic effects on variably methylated regions

description: We first identified candidate VMRs, defined as regions of CpG-sites showing the highest variability across all methylation sites.To examine the factors that best explain the variance in methylation in these functionally relevant sites, we chose the CpG-site with the highest MAD-score as representative of the VMR. These CpGs are named tagCpGs. We next compared the fit of four models for each of the 3,782 tagCpGs: best SNP (G model), best environment (E model), SNP + environment (G+E model) and SNP x environment (GxE model). For each tagCpG, the model with the lowest AIC was chosen as the best model.<br><br>
DOI: 10.6084/m9.figshare.26240648.v2
title: <b>GBD 2021 青少年</b><b>的心血管疾病 </b><b>和年轻人</b>

description: 该数据集包含与 13 种心血管疾病相关的元数据，包括 1990 年至 2021 年期间 204 个国家或地区的 15-39 岁人群的患病率、发病率、死亡和残疾调整生命年 （DALY） 和 11 种特定心血管疾病。此外，该数据集还提供了可归因于各种风险因素的死亡和残疾调整生命年的数据。
DOI: 10.6084/m9.figshare.27159813.v1
title: Supplementary Material for: Toll-like receptor 2 attenuates the formation and progression of Angiotensin II induced abdominal aortic aneurysm in ApoE-/- mice

description: Introduction: We demonstrated toll-like receptor (TLR) 4 in the pathogenesis of AngiotensinII (AngII) mediated AAA formation. Here we study TLR2 in the AAA formation. Methods: Male ApoE-/- and ApoE-/-TLR2-/- mice were treated with AngII. Mice were injected with the TLR2 agonist Pam3CSK4. The incidence and severity of AAA were determined. MCP-1, MCP-5, Rantes, CXCL10, CCR5 and CXCR3 were analyzed. M1 and M2 macrophages in aorta were detected by flow cytometry. Results: These studies demonstrated an increase in AAA formation in TLR2-/- mice and a decrease by Pam3CSK4. Pam3CSK4 decreased the ratio of M1/M2, the levels of Rantes, CXCL10, CCR5 and CXCR3. Furthermore, Pam3CSK4 treatment one week following AngII retarded the progression of AAA. Conclusion: These data demonstrated a protective effect of TLR2 signaling on AAA in association with a decrease in the ratio of M1 to M2 macrophages and the expression of chemokines and their receptors. Furthermore, the treatment of Pam3CSK4 after AngII demonstrated a marked retardation of lesion progression. Given the fact that most AAAs patients are detected late in the disease process, these findings suggest that TLR2 stimulation may play a therapeutic role in retarding disease progression.
DOI: 10.6084/m9.figshare.26300464.v1
title: Supporting data: AI Detectors are Poor Western Blot Classifiers: A Study of Accuracy and Predictive Values.

description: This folder gives the supporting data for the manuscript entitled: AI Detectors are Poor Western Blot Classifiers: A Study of Accuracy and Predictive Values. It contains:The entire prompting history used to create images.A spreadsheet (Excel) that summarises all quantitative analyses.A spreadsheet (Excel) that provides details of all sampled articles.Comma-separated values (CSV) files for each specific data set.The R codes used to analyse the data.GraphPad Prism files used to generate the figures.There were no ethical issue related to human or animal research in this project. All analyses were performed on already published historical data or images generated by ChatGPT.
DOI: 10.6084/m9.figshare.7133174.v1
title: ESM 2: Background noise L90 values from Acoustic adaptation to city noise through vocal learning by a songbird

description: For each frequency in the noise spectrogram, we found the SPL exceeded 90% of the time (L90), and this was the background spectrum we used for masking calculations.
DOI: 10.6084/m9.figshare.1588794.v2
title: Vibration Data

description: The data of human vibration collected in the University of Rochester campus.
DOI: 10.6084/m9.figshare.4223799.v1
title: RL1-10.fas

description: Ten samples (RL1 to RL10), encompassing 9.6 years of chronic HCV genotype 4a infection, from a single, treatment-naive patient were subjected to pyrosequencing analysis. <br><br>
DOI: 10.6084/m9.figshare.28701560.v1
title: Data and Code for "Bird and arthropod response to herbicide and grazing: trade-offs and time lags in invasive plant management"

description: Data, code, and results accompanying the following article: Coon, J.J., Maresh Nelson, S.B., Daughtridge, R.C., Debinski, D.M., Schacth, W.H., and Miller, J.R. Grassland bird and arthropod responses to herbicide and grazing: Trade-offs and time lags in invasive plant management.
DOI: 10.6084/m9.figshare.19929146.v1
title: Leaf morphoanatomy of ryegrass in the tree species understory in agroforestry systems

description: ABSTRACT The verification of changes that occur in the plant, due to the acclimatization to the shading, assists in the selection of forage species suitable for use in agroforestry systems. The aim of this study was to evaluate the leaf morphoanatomy of ryegrass (Lolium multiflorum Lam.) in the tree species understory in agroforestry systems. The experiment was conducted in Frederico Westphalen, RS, Brazil, between June and September 2012, in an experimental design of randomized blocks. The annual ryegrass was sown in three environments: full sunlight, understory of angico-vermelho (Parapiptadenia rigida Benth.), and canafístula (Peltophorum dubium Spr. Taubert), with three replications. Forest species were distributed in five lines, separated by 6.0 m. The following variables were evaluated: incident photosynthetically active radiation (RFAi), transmissivity of RFAi, specific leaf area, leaf mesophyll thickness, thickness of outer periclinal wall + cuticle, stomatal size, and stomatal density. The presence of forest species causes changes in the lighting conditions of the production environment of ryegrass and causes adjustments in the leaves of this species, which result in increased specific leaf area, decreased mesophyll and thickness of the outer periclinal wall + cuticle, as well as increased amount and size of the stomata. These adjustments result from the acclimation capacity of ryegrass, which, in low-light conditions, alter their morphology to capture more solar radiation and increase the photosynthetic area.
DOI: 10.6084/m9.figshare.24524317.v1
title: Single-cell tracking data of SOX2-mKate2 and UbC-GFP expression in GBM1 cells in proliferative and quiescent conditions. Data from 3 clonal lines (C7, E4 and F6)

description: Single-cell tracking data of SOX2-mKate2 and UbC-GFP expression in GBM1 cells in proliferative and quiescent conditions. Data are from 3 clonal lines (C7, E4 and F6)SOX2-mKate2 and UbC-GFP expression were recorded in the same cell. Data were acquired every 20 minutes.
DOI: 10.6084/m9.figshare.14109719.v1
title: DB_Heart Rate Recovery_INER

description: There are several methods to assess the function of the autonomic nervous system. One method that is easy, low-cost, and acceptable by the scientific community is heart rate recovery (HRR). Different pathological conditions have been related to the development of autonomic dysfunction. The aim of our study was to evaluate the relationship between heart rate recovery (HRR) and HRR-derived parameters and respiratory, biochemical, and hematological condition in controlled patients of the medical service of the National Institute of Respiratory Diseases, Mexico City. All participants were subjected to anthropometric and respiratory evaluations. Fasting blood samples were taken before participants performed a 6-minute walking test (6MWT), and the blood analysis included chemical and hematological tests. After the 6MWT, heart rate (HR) was recorded at rest during the last 5 min. and was used to estimate HRR and relative HRR (rHRR) at the first and second minutes. Data base of nutritional, serum biochemical, blood cells counts, six-minute walking test measurement of controlled patients is present as data base reservoir of a pilot study title "Biochemical and hematological relationship with the evaluation of Autonomic Dysfunction by Heart Rate Recovery"
DOI: 10.6084/m9.figshare.7201232.v2
title: PPTC PDX SNP array files

description: Data deposited here have origins through the National Cancer Institute Pediatric Preclinical Testing Consortion (NCI PPTC) and Alex's Lemonade Stand Foundation. SNP array BAF/LRR text files, GC correction file, Nexus sample upload file, segmentation file.
DOI: 10.6084/m9.figshare.3843459.v1
title: Creating realistic silica nanopores for molecular dynamics simulations

description: We present a detailed approach to create realistic silica pores for computer simulations especially molecular dynamics (MD) simulations. These pores are essential for all different kinds of simulations with liquids in silica confinements. Despite wide use of silica pores in simulations, a detailed documentation how to create these pores for simulations still lacks. This issue is of high significance because with the help of this paper every researcher can build own silica pores with desired geometries and is not stick to already existing pores. We discuss problems that might occur during the whole process and how to solve these problems. So far more than 3 different silica pores have been created with this method and used successfully as confinement material in MD simulations.
DOI: 10.6084/m9.figshare.5709277.v1
title: Additional file 9: DataÂ 6. of Diversification of defensins and NLRs in Arabidopsis species by different evolutionary mechanisms

description: Characteristics of the Arabidopsis transcriptomes compared. (XLSX 54Â kb)
DOI: 10.6084/m9.figshare.1252166.v1
title: 3D Ostrich knee anatomy STL files

description: STL files comprising the 3D anatomy of an ostrich knee
DOI: 10.6084/m9.figshare.27889299.v1
title: Supplementary Data 1.txt

description: STR data from a study titled “Genomic landscape of short tandem repeat in cattle”
DOI: 10.25573/data.14939583.v1
title: PSMC

description: Files generated from PSMC pipeline. PSMC output files and variant calling files generated from bcftools.