cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/kftt-sk12
title: Modeling and Characterization of Deep-Etched Multilayer Resonators Under Partial Coherent Excitation Using Multimode Optical Fibers

description: Recently, there has been a resurgence of interest in multimode optical fibers illuminated by a white light source. Largely, in the anticipation of many integrated applications in the biomedical domain and spectral sensing benefiting from the broad spectral range and high numerical aperture. Along these lines, the output light from these fibers can be captured by the physics of partially coherent sources. Yet, the sheer complexity arising from the interplay between partial coherence and microstructure transfer function has posed fundamental challenges in deciphering their response. In this work, we present a numerical model and experimental characterization for the performance of multilayer optical resonators, fabricated by high aspect ratio etching of silicon, under partial coherent optical source excitation. The model studies the effects of optical fiber numerical aperture, Bragg mirror order, cavity length, and surface roughness of the microstructures on the output of the resonator. The results show that the response under standard multimode fiber (partial coherent source) has lower insertion loss, more asymmetry versus wavelength, and larger full width at half maximum (FWHM) than the standard single mode fiber (full coherent source). A MEMS chip is fabricated using 125 µm deep etching of silicon for Bragg mirrors with 2.25, 3, and 3.25 µm silicon layer width and a different number of layers. The structures are characterized using a multimode fiber of 62.5 µm core diameter illuminated by an infrared white light source. The theoretical results have been compared with the experimental results and a good agreement has been obtained.
DOI: 10.6084/m9.figshare.21780349
title: IPM code from Mechanistic models to meet the challenge of climate change in plant–pathogen systems

description: Code to produce results from Box 1
DOI: 10.6084/m9.figshare.21780349.v1
title: IPM code from Mechanistic models to meet the challenge of climate change in plant–pathogen systems

description: Code to produce results from Box 1
DOI: 10.6084/m9.figshare.21780077
title: Young Hoon Soong & Eun Sung Chung Monthly potential evapotranspiration dataset based on CMIP6 GCM (MPI-ESM1-2-HR-Future period)

description: Regridding Global CMIP6 GCMs datasets(0.5 degree) case of MPI-ESM1-2-HR <br> Composition of datasets: Average temperature, Maximum temperature, Minimum temperature, Windspeed, Relative humidity, Solar radiation <br> SSP scenarios: SSP1-2.6; SSP2-4.5; SSP3-7.0; SSP5-8.5
DOI: 10.6084/m9.figshare.21780077.v3
title: Young Hoon Soong & Eun Sung Chung Monthly potential evapotranspiration dataset based on CMIP6 GCM (MPI-ESM1-2-HR-Future period)

description: Regridding Global CMIP6 GCMs datasets(0.5 degree) case of MPI-ESM1-2-HR <br> Composition of datasets: Average temperature, Maximum temperature, Minimum temperature, Windspeed, Relative humidity, Solar radiation <br> SSP scenarios: SSP1-2.6; SSP2-4.5; SSP3-7.0; SSP5-8.5
DOI: 10.6084/m9.figshare.21780077.v2
title: Young Hoon Soong & Eun Sung Chung Monthly potential evapotranspiration dataset based on CMIP6 GCM (MPI-ESM1-2-HR-Future period)

description: Regridding Global CMIP6 GCMs datasets(0.5 degree) case of MPI-ESM1-2-HR <br> Composition of datasets: Average temperature, Maximum temperature, Minimum temperature, Windspeed, Relative humidity, Solar radiation <br> SSP scenarios: SSP1-2.6; SSP2-4.5; SSP3-7.0; SSP5-8.5
DOI: 10.6084/m9.figshare.21517659.v1
title: UBE2J1 inhibits colorectal cancer progression by promoting ubiquitination and degradation of RPS3

description: Our study revealed a novel role of UBE2J1 mediated RPS3 poly-ubiquitination and degradation in disrupting the NF-κB signaling pathway, which may serve as a novel and promising biomarker and therapeutic target for CRC.
DOI: 10.6084/m9.figshare.21517659
title: UBE2J1 inhibits colorectal cancer progression by promoting ubiquitination and degradation of RPS3

description: Our study revealed a novel role of UBE2J1 mediated RPS3 poly-ubiquitination and degradation in disrupting the NF-κB signaling pathway, which may serve as a novel and promising biomarker and therapeutic target for CRC.
DOI: 10.6084/m9.figshare.21780362
title: Supplementary Table

description: List of studies and supplementary tables of a meta-analysis study investigating the relationships between dietary levels of rumen-protected lysine and lysine + methionine with milk production, plasma amino acids profile, and nitrogen metabolism of lactating dairy cows
DOI: 10.6084/m9.figshare.21780362.v1
title: Supplementary Table

description: List of studies and supplementary tables of a meta-analysis study investigating the relationships between dietary levels of rumen-protected lysine and lysine + methionine with milk production, plasma amino acids profile, and nitrogen metabolism of lactating dairy cows
DOI: 10.6084/m9.figshare.21779501
title: Dataset for Auditory Interaction Between Runners: Does Footstep Sound Affect Step Frequency of Neighboring Runners?

description: This is the dataset for runners' step frequency (SF), heart rate (HR) and rating of perceived exertion (RPE) collected in laboratory, which was used in the study on Furukawa et al. (2023) 'Auditory Interaction Between Runners: Does Footstep Sound Affect Step Frequency of Neighboring Runners?'. <br> <br> <br> Abstract This study aimed to investigate the effect of footsteps of a neighboring runner (NR) on the main runner's SF, HR, and RPE. The participants were male long-distance runners belonging to a university track and field team. Two experiments were conducted in which the main runner (participant) and NR (examiner) ran with the same running speed on two adjacent treadmills separated by a thin wall. The participants were instructed that the experimental purpose was to investigate the HR when running with others and running alone. In Experiment 1, NR performed three trials of changing the footstep tempo in 5 bpm (beat per minute) faster (+5bpmFS), 5 bpm slower (-5bpmFS), or no footsteps (NF) conditions. The results showed that the footstep condition affected the variability of the SF but not the mean SF. Next, Experiment 2 was conducted by increasing the footstep tempo condition. NR performed seven trials of changing the footstep tempo by ±3 bpm, ±5 bpm, ±10 bpm, or no footstep. The results showed that the footstep condition affected the mean SF and the SF decreased at -10bpmFS compared to NF. There were no differences in the HR and RPE between conditions. These results indicated that the footsteps of NR could influence the SF, although it was unclear whether footsteps were involved in the synchronization between runners. Overall, our findings emphasize the environmental factors that influence running behavior, including the NR's footsteps. <br> <br> <br> For more details on how to view the data sets <br> SF, HR, and RPE data are in .xlsx format. Experiment 1 or Experiment 2 is indicated in the file name. p1-p16 represent participant number. <br> The name of each sheet is the name of the condition. <br> Also, the running speed data is in .docx format. <br> In Experiment 2, the all data of participant p12 (equal to #18 in running speed data) was excluded from the analysis of this study because he had a within-participant standard deviation of SF greater than 3 SDs from the mean across participants. <br> <br>
DOI: 10.6084/m9.figshare.21780431
title: test_run from Shear dilation of subglacial till results in time-dependent sliding laws

description: Example run of numerical scheme
DOI: 10.6084/m9.figshare.21780431.v1
title: test_run from Shear dilation of subglacial till results in time-dependent sliding laws

description: Example run of numerical scheme
DOI: 10.6084/m9.figshare.21780434
title: phi_evolve from Shear dilation of subglacial till results in time-dependent sliding laws

description: Numerical scheme
DOI: 10.6084/m9.figshare.21780434.v1
title: phi_evolve from Shear dilation of subglacial till results in time-dependent sliding laws

description: Numerical scheme
DOI: 10.6084/m9.figshare.21780437
title: unpackI from Shear dilation of subglacial till results in time-dependent sliding laws

description: Plotting script
DOI: 10.6084/m9.figshare.21780437.v1
title: unpackI from Shear dilation of subglacial till results in time-dependent sliding laws

description: Plotting script
DOI: 10.34740/kaggle/dsv/4772569
title: AutoXGB
DOI: 10.6084/m9.figshare.21780449.v1
title: Metagenomic analysis reveals the correlation of colonic microbiota composition with immune response in weaned piglets fed with Garlic essential oil

description: The files contain raw data and analysis process and results, The results were expressed as means ± standard error of the means (SEM). Differences between means were considered <em>P </em>&lt; 0.10 as a significant trend, <em>P </em>&lt; 0.05 as significant difference, and <em>P</em> &lt; 0.01 as highly significant.
DOI: 10.6084/m9.figshare.21780449
title: Metagenomic analysis reveals the correlation of colonic microbiota composition with immune response in weaned piglets fed with Garlic essential oil

description: The files contain raw data and analysis process and results, The results were expressed as means ± standard error of the means (SEM). Differences between means were considered <em>P </em>&lt; 0.10 as a significant trend, <em>P </em>&lt; 0.05 as significant difference, and <em>P</em> &lt; 0.01 as highly significant.
DOI: 10.6084/m9.figshare.20502567.v3
title: Socio-cognitive determinants affecting insulin adherence/non-adherence in late adolescents and young adults with type 1 diabetes: a systematic review

description: This extended data for the systematic review entitled “ Socio-cognitive determinants affecting insulin adherence/non-adherence in late adolescents and young adults with type 1 diabetes: a systematic review” contains the following dataset: Appendix 1: PubMed search strategy. Appendix 2: The National Heart, Lung, and Blood Institute (NHLBI) quality assessment tool for observational cohort and cross-sectional studies. Appendix 3: Data extraction form adapted from the Cochrane Collaboration.
DOI: 10.34740/kaggle/ds/2759900
title: Serie A Team Statistics 1994-2021
DOI: 10.5519/qd.lfvzb41a
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5404829 records)
DOI: 10.17632/m4sgc32fpv.1
title: Data from: Automated acoustic monitoring captures timing and intensity of bird migration

description: Published in Journal of Applied Ecology.

Abstract
1: Monitoring small, mobile organisms is crucial for science and conservation, but is technically challenging. Migratory birds are prime examples, often undertaking nocturnal movements of thousands of kilometres over inaccessible and inhospitable geography. Acoustic technology could facilitate widespread monitoring of nocturnal bird migration with minimal human effort. Acoustics complements existing monitoring methods by providing information about individual behaviour and species identities, something generally not possible with tools such as radar. However, the need for expert humans to review audio and identify vocalizations are challenges to application and development of acoustic technologies.
2: Here, we describe an automated acoustic monitoring pipeline that combines acoustic sensors with machine listening software (BirdVoxDetect). We monitor four months of autumn migration in the northeastern United States with five acoustic sensors, extracting nightly estimates of nocturnal calling activity of 14 migratory species with distinctive flight calls. We examine the ability of acoustics to inform two important facets of bird migration: (1) the quantity of migrating birds aloft and (2) the migration timing of individual species. We validate these data with contemporaneous observations from Doppler radars and a large community of citizen scientists, from which we derive independent measures of migration passage and timing.
3: Together, acoustic and weather data produced accurate estimates of the number of actively migrating birds detected with radar. A model combining acoustic data, weather, and seasonal timing explained 75% of variation in radar-derived migration intensity. This model outperformed models that lacked acoustic data. Including acoustics in the model decreased prediction error by 33%. A model with only acoustic information outperformed a model comprising weather and date (57% vs. 48% variation explained, respectively).
4: Acoustics also successfully measured migration phenology: species-specific timing estimated by acoustic sensors explained 71% of variation in timing derived from citizen science observations.
5: Synthesis and applications. Our results demonstrate that cost-effective acoustic sensors can monitor bird migration at species resolution at the landscape scale and should be an integral part of management toolkits. Acoustic monitoring presents distinct advantages over radar and human observation, especially in inaccessible and inhospitable locations, and requires significantly less expense. Managers should consider using acoustic tools for monitoring avian movements and identifying and understanding dangerous situations for birds. These recommendations apply to a variety of conservation and policy applications, including mitigating the impacts of light pollution, siting energy infrastructure (e.g. wind turbines), and reducing collisions with structures and aircraft.
DOI: 10.15128/r2m326m176m
title: Laser spectroscopy of hot atomic vapours: from ’scope to theoretical fit [dataset]

description: Code published on GitHub: https://github.com/durham-qlm/scope2elecsus
description: The spectroscopy of hot atomic vapours is a hot topic. Many of the work-horse techniques of contemporary atomic physics were first demonstrated in hot vapours. Alkali-metal atomic vapours are ideal media for quantum-optics experiments as they combine: a large resonant optical depth; long coherence times; and well-understood atom-atom interactions. These features aid with the simplicity of both the experimental set up and the theoretical framework. The topic attracts much attention as these systems are ideal for studying both fundamental physics and has numerous applications, especially in sensing electromagnetic fields and quantum technology. This tutorial reviews the necessary theory to understand the Doppler broadened absorption spectroscopy of alkali-metal atoms, and explains the data taking and processing necessary to compare theory and experiment. The aim is to provide a gentle introduction to novice scientists starting their studies of the spectroscopy of thermal vapours whilst also calling attention to the application of these ideas in the contemporary literature. In addition, the work of expert practitioners in the field is highlighted, explaining the relevance of three extensively-used software packages that complement the presentation herein.
DOI: 10.3886/e140401v1
title: What are the health benefits of a constant water supply? Evidence from London, 1860-1910

description: In this project, we investigated the health benefits of a 25-year improvement in water quality as London transitioned from a system of intermittent water supply (IWS) to a constant water supply (CWS). We assessed the mortality effects of London’s transition from an intermittent to a constant water supply between 1871 and 1910, as the proportion of London households with access to CWS (24 hours a day, 7 days a week) rose from less than 20 to nearly 100 percent. We used waterborne disease mortality data for the Registration County of London corrected for institutional deaths by William Luckin, Graham Mooney and Andrea Tanner as part of their Mortality in the Metropolis, 1860-1920 project. We combined this with data on constant service and population shares for London's eight water companies, census data on district level population and demographics, and Registrar General data on deaths from non-waterborne causes.
description: Persons living in London between 1860 and 1910. Smallest Geographic Unit: Registration district
description: Waterborne disease mortality data was provided by William Luckin, Graham Mooney and Andrea Tanner and collected as part of their Mortality in the Metropolis, 1860-1920 project. July 1999. Funded by The Wellcome Trust. Center for Metropolitan History, https://archives.history.ac.uk/cmh/projects.html#1920.
DOI: 10.5281/zenodo.4540577
title: Data from: Characterization and comparison of the digestive physiology of two scombrids, <i>Katsuwonus pelamis</i> and <i>Sarda sarda</i>, in the Gulf of Cádiz

description: Metadata from the skipjack tuna (<em>Katsuwonus pelamis</em>) gut microbiome profiling by 16S sequencing
DOI: 10.6084/m9.figshare.12424970
title: Metadata record for: Outlining where humans live, the World Settlement Footprint 2015

description: This dataset contains key characteristics about the data described in the Data Descriptor Outlining where humans live, the World Settlement Footprint 2015. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> <br>
DOI: 10.5066/p9o61bcb
title: Dataset: Plant and bee transects in the Northern Great Plains 2015-2018

description: These data were collected to fulfill multiple Inter-agency agreements established by USGS and multiple partners: USDA Farm Service Agency, USDA Natural Resources Conservation Service, and the Honey Bee Health Coalition. In this study USGS scientists conducted floral resource and insect pollinator assessments across multiple land covers in North Dakota, South Dakota, and Minnesota from 2015 to 2018. Sampling was done along 2x20m transects in June through September by a single observer. All transects were located on private or public grasslands such as Conservation Reserve Program (CRP) lands, Environmental Quality Incentives Program (EQIP) lands, managed pasture, haylands, roadside ditches, Waterfowl Production Areas (WPA), National Wildlife Refuges (NWR), and Wildlife Management Areas (WMA). Transect locations were randomly selected in a Geographic Information System and all transects were &amp;amp;amp;amp;amp;amp;amp;gt;10 m from each other. Each 20x2m transect was surveyed during three time periods (08 June-15 July, 16 July- 15 Aug, 16 Aug-15 Sept) by a single observer who quantified floral resources and noted observations of honey bees and wild bees on specific flowers within the transect boundary. Transect boundaries were delineated with a meter tape laid along the center line and metal flags at the four corners. At each transect, observers counted the number of basal stems that supported one or more inflorescences, which served as our index of flower abundance (hereafter referred to as flower abundance). Flowering plants were identified to species in most cases. During flower counts, observers recorded observations of wild bees and honey bees collecting nectar or pollen from specific flowers. Bees flying through the transect, but not landing on a flower, were not recorded. At a subset of transects, starting in 2016, individual native bees were netted while visiting flowers. Captured native bees were euthanized and brought to Northern Prairie Wildlife Research Center for identification.
DOI: 10.5066/p9ouvuui
title: Operational Global Actual Evapotranspiration using the SSEBop model

description: The data presented here are in support of the evaluation efforts of the satellite-based actual Evapotranspiration (ETa) using the Operational Simplified Surface Energy Balance (SSEBop) model. The ETa data is currently used by the U.S. Geological Survey Famine Early Warning System Network (FEWS NET) to produce and post multitemporal ETa and ETa anomalies online on a regular basis for drought monitoring and early warning purposes and are freely available for download at https://earlywarning.usgs.gov/fews/.
DOI: 10.5281/zenodo.6609701
title: Digital elevation data of Nakadake first crater, Aso Volcano, Japan, in March and May 2015

description: We here present two digital elevation models (DEMs) for the Nakadake first crater, Aso Volcano, Japan (Kazama et al., 2015). The DEMs were created using the software of Agisoft PhotoScan (version: 1.1.5), and synthesized from photographs taken with DJI Phantom 2 Vision FC200 and PENTAX Optio WG-2. Two zip files (1503.zip and 1505.zip) correspond to the DEMs as of March and May 2015, originating from the photo data taken on March 26-27 and May 8, 2015, respectively. In synthesizing the DEMs, the absolute coordinate of the ground surface was fixed by seven ground control points (GCPs) located around the crater; the GCPs' coordinates had been determined with GNSS surveys in advance. In each zip file (15??.zip), 15??.xyz indicates the raw topographic data, and its each line contains longitude [deg], latitude [deg] and elevation [m]. The DEM resolution is 0.000005 deg (~= 50 cm) for longitude and latitude, and 0.000001 m for elevation. Both 15??.stl and 15??.pdf are the three-dimensional shape of the DEM data, and they can be shown using typical 3D viewers and Adobe Acrobat Reader, respectively. Both 15??.jpg and 15??.kmz are the orthophotographs of the Nakadake crater; in particular, 15??.kmz can be projected to maps using map softwares such as Google Earth Pro. Note that the DEM coordinate may contain random and/or systematic errors greater than the DEM resolution. According to the PhotoScan software, the coordinate errors of the GCPs were estimated to be (longitude, latitude, elevation) = (0.62, 4.01, 6.87) and (4.27, 3.94, 1.78) meters for 1503.xyz and 1505.xyz, respectively. Acknowledgments: Aso Volcano Disaster Prevention Council helped us taking photographs at the Nakadake first crater.
description: {"references": ["Kazama et al. (2015): Estimation of temporal gravity changes associated with variations in the crater bottom topography of Aso Volcano. Programme and abstracts the Volcanological Society of Japan, 2015, 148, doi:10.18940/vsj.2015.0_148"]}
DOI: 10.3886/e123521v1
title: Data and Code for "Stock Market Wealth and the Real Economy: A Local Labor Market Approach"

description: This data archive contains the data and programs necessary to replicate the empirical and numerical analyses in the paper "Stock Market Wealth and the Real Economy: A Local Labor Market Approach."<br><br>The paper provides evidence of the stock market wealth effect on consumption by using a local labor market analysis and regional heterogeneity in stock market wealth. An increase in local stock wealth driven by aggregate stock prices increases local employment and payroll in nontradable industries and in total, while having no effect on employment in tradable industries. In a model with consumption wealth effects and geographic heterogeneity, these responses imply a marginal propensity to consume out of a dollar of stock wealth of 3.2 cents per year. We also use the model to quantify the aggregate effects of a stock market wealth shock when monetary policy is passive. A 20% increase in stock valuations, unless countered by monetary policy, increases the aggregate labor bill by at least 1.7% and aggregate hours by at least 0.7% two years after the shock.