cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/jzm774yf2w.1
title: Non-targeted high-resolution mass spectrometry  study for evaluation of milk freshness-Supplementary Material

description: Supplementary material to the article "Non-targeted high-resolution mass spectrometry  study for evaluation of milk freshness-Supplementary Material"

Abstract:
Milk freshness is an important parameter for both consumers’ health and quality of milk-based products. 
Up to now there have been neither analytical methods nor specific parameters to uniquely define milk freshness from a complete and univocal chemical perspective. In this study, 8 molecules were selected and identified as responsible for milk aging, using a liquid chromatography–high-resolution mass spectrometry approach followed by chemometric data elaboration. 
For model setup and marker selection, 30 high-quality pasteurized fresh milk samples were collected directly from the production site and analyzed immediately and after storage at 2 to 8°C for 7 d.  The markers were then validated by challenging the model with a set of 10 milk samples, not previously analyzed. Our results demonstrated that the markers identified within this study can be successfully used for the correct classification of non-fresh milk samples, complementing and successfully enhancing parallel evaluations obtainable through sensory measures.

Description of Supplementary Material:
 
SECTION 1 – MULTIVARIATE DATA ELABORATION
The final PCA (negative mode) and the OPLS-DA (negative mode) scores plot of the results obtained are presented in figures S1-S2.
The variance of the x and y variables explained by the model (R^2 X (cum) and R^2 Y (cum)), and the cumulative predicted variation in the Y matrix (Q^2 (cum)) are reported below each figure.

Figure S1. ESI - PCA scores plot of milk samples. Blue dots: Fresh Samples; green dots: “7 days” samples
Figure S2. ESI - OPLS‐DA scores plot of the fresh samples against the “7 day” samples

SECTION 2 – COMPOUNDS IDENTIFICATION
Figure S3. Trends of the identified molecules through all the time points: Mean area values (+/- Standard Error) of the target compounds through the time points. Time points: blue bar, “t zero”; yellow bar, “1 day”; orange bar, “2 days”; green bar, “3 days”; violet bar, “4 days”; red bar, “7 days”

SECTION 3 – SENSORIAL EVALUATIONS
Table S1: List of the tasted sample
Table S2: Resume of the panelist’s evaluations
DOI: 10.17632/zt52h4j3tn.1
title: LINF_170010400

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/fxfvtgsn66.2
title: NUMBER OF STAGES AND THERMAL PRETREATMENT EFFECTS ON BIOGAS PRODUCTION FROM LIGNOCELLULOSIC MATERIALS

description: Data of the biogas production and methane content
DOI: 10.17632/ccdx7ccf4g.1
title: LINF_280034800

description: Activated protein kinase c receptor (LACK) | RACK1
Leishmania infantum (strain JPCM5)
DOI: 10.17632/93msfbhkbh.1
title: LINF_280034700

description: Activated protein kinase c receptor (LACK) | RACK1 | GBLP
Leishmania infantum (strain JPCM5)
DOI: 10.17632/r58pyjyvbx.1
title: Integrando Google Colab e Yahoo Finance (compactação e download de cotações em formato CSV) published at the "Open Code Community"

description: Material published at "https://opencodecom.net/post/2021-07-22-como-baixar-e-zipar-csv-utilizando-python/"
DOI: 10.15468/y2g5ns
title: The red-listed species Thamnurgus rossicus in East Europe is a synonym of the rare Central European species, T. petzi (Curculionidae: Scolytinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Jordal, Bjarte H., Gebhardt, Heiko, Mandelshtam, Michail Y. (2013): The red-listed species Thamnurgus rossicus in East Europe is a synonym of the rare Central European species, T. petzi (Curculionidae: Scolytinae). Zootaxa 3750 (1): 83-88, DOI: http://dx.doi.org/10.11646/zootaxa.3750.1.6
DOI: 10.17632/wpgpcfxxbs.1
title: Introdução ao dplyr published at the "Open Code Community"

description: Material published at "https://opencodecom.net/post/2021-07-26-introducao-ao-dplyr/"
DOI: 10.17632/svc3t8v3hs.1
title: Replication code and data for “Financial education affects financial knowledge and downstream behaviors” (by Tim Kaiser, Annamaria Lusardi, Lukas Menkhoff and Carly Urban) 

description: This repository contains data and code to replicate the tables and figures of "Financial education affects financial knowledge and downstream behaviors".
DOI: 10.15468/ajkzxr
title: A new species of the genus Thoracochirus Bernhauer (Coleoptera: Staphylinidae: Osoriinae) from Yunnan, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Li, Guo-Feng, Wang, Chun-Mei, Li, Zhong-Wei, Zhou, De-Quan (2013): A new species of the genus Thoracochirus Bernhauer (Coleoptera: Staphylinidae: Osoriinae) from Yunnan, China. Zootaxa 3750 (1): 89-94, DOI: http://dx.doi.org/10.11646/zootaxa.3750.1.7
DOI: 10.17632/brnbxpmw69.1
title: TCDP waveforms

description: Waveforms used for the study "Observation on temporal variations of seismic anisotropy within an active fault-zone revealed from the Taiwan Chelungpu-fault Drilling Project Borehole Seismic Array"

RAW_WAVEFORMS: 794 earthquake waveforms after basic data process (see Lin et al. 2012)
TCDP_eq_list.xlsx: earthquake source information (see also Readme.txt for more information)
DOI: 10.15468/cg4vdx
title: Two new species of the genus Cicadatra Kolenati (Hemiptera: Cicadidae) from Pakistan

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ahmed, Zubair, Akhter, Muhammad Atique (2013): Two new species of the genus Cicadatra Kolenati (Hemiptera: Cicadidae) from Pakistan. Zootaxa 3750 (2): 176-184, DOI: http://dx.doi.org/10.11646/zootaxa.3750.2.5
DOI: 10.17632/mt3yssmkvj.1
title: Kinetic modeling reveals additional regulation at co-transcriptional level by post-transcriptional sRNA regulators, Reyer et al. 

description: All code and data used in the manuscript "Kinetic modeling reveals additional regulation at co-transcriptional level by post-transcriptional sRNA regulators"
DOI: 10.17632/v2trr4dhv8.1
title: LINF_170012300

description: vacuolar-type Ca2+-ATPase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/f5rgcn2fs9.1
title: LINF_170011200

description: Protein kinase (STE family)
Leishmania infantum (strain JPCM5)
DOI: 10.17632/r3z6vp396m.1
title: Chinese medicinal blossom-dataset

description: The blossom images of traditional Chinese medicinal herbs were captured by Google search. The images were divided into twelve categories: (1) Syringa, (2) Bombax malabarica, (3) Michelia alba, (4) Armeniaca mume, (5) Albizia julibrissin, (6) Pinus massoniana, (7) Eriobotrya japonica, (8) Styphnolobium japonicum, (9) Prunus persica, (10) Firmiana simplex, (11) Ficus religiosa and (12) Areca catechu. The number of original images is 1716, and the total number of images acquired after data augmentation was 12538. The dataset provide a collection of blossom images on traditional Chinese herbs help Chinese pharmacist to classify the categories of Chinese herbs. In addition, the dataset can serve as a resource for researchers who use different algorithms of machine learning or deep learning for image segmentation and image classification.
DOI: 10.17632/cdxtkcvc76.1
title: LINF_170010900

description: DnaJ domain-containing protein | JDP10 | J10
Leishmania infantum (strain JPCM5)
DOI: 10.17632/k39gc6f33j.1
title: Prevalence and Risk Factors of Falls in Suez, Egypt

description: Data of 300 older adults (both men and women) recruited from 3 primary healthcare centers, all located in Suez Governorate, Egypt to know prevalence of falls and its common risk factors among this population.
DOI: 10.17632/289m8hcgt2.1
title: Mass Transfer Solver Tool: A software to calculate mass transfer coefficients for Packed-bed Columns 

description: The Mass Transfer Solver Tool is a calculation software for gas-liquid mass transfer coefficients for random and structured packed-bed columns. This software refers to the work of Flagiello et al. (2021) entitled "A tool for mass transfer evaluation in packed-bed columns for chemical engineering students" and published in the scientific journal of Education for Chemical Engineers (https://doi.org/10.1016/j.ece.2021.08.001).

The MT Solver Tool is based on the use of the most acknowledged models available in the pertinent literature (Onda et al., 1968; Bravo et al., 1985, 1992; Billet and Schultes, 1993; Brunazzi and Paglianti, 1997; Olujić et al. , 2004; Hanley and Chen, 2012) to calculate the gas-side (ky), liquid-side (kx) and interfacial area (ae) coefficients separately.
The software includes a "Library File" where geometric data and model fitting parameters for 144 different packings in size and materials are available. The spreadsheet file "MT Solver" operating in default mode uses the data of the 144 packings available in the "Library File" to calculate the mass transfer coefficients. Futhermore, the software can also be operated in user-defined mode "User-defined MT Solver" in order to customize and expand its use when the considered packing is not included in the Library File.

The MT Solver Tool was also used in teaching activities in the academic year 2020-2021 for the Unit Operation and Sustainable Process Design courses of the Master's degree in Chemical Engineering, at the University of Naples Federico II.

All the instructions for use are given in the work: A tool for mass transfer evaluation in packed-bed columns for chemical engineering students (https://doi.org/10.1016/j.ece.2021.08.001).

Any system bugs, calculation errors deriving from the model equations or the parameters set in the library can be reported to the email address: domenico.flagiello@unina.it (Dr. Domenico Flagiello).
Suggestions for model equations updates or data and packing parameter values ​​included in the library (or new data packing) are also welcome.
DOI: 10.17632/gp9c7bfzj7.1
title: Ubicación de recursos físicos en las bibliotecas abiertas

description: Los documentos hacen parte de la información que se levantó a medida que se desarrollaba una investigación cuyo alcance estuvo definido en conocer las razones por las que los usuarios de bibliotecas abiertas se les dificulta la ubicación de los recursos bibliográficos en las estanterías. Además, esa información serviría de insumo para el desarrollo de una herramienta tecnológica que se integraría a los catálogos de bibliotecas y aportaría una solución a esta necesidad de ubicación rápida y precisa
DOI: 10.17632/fhnkrf3jdr.1
title: Research figures

description: Research figures of antibiotic susceptibility and PCR
DOI: 10.17632/23zbd3yrmn.1
title: Standard PBMC cryopreservation selectively decreases detection of nine clinically-relevant T-cell markers

description: Biobanking is an operational component of various epidemiological studies and clinical trials. Although peripheral blood is routinely acquired and stored in biobanks, the effects of specimen processing on cell composition and clinically-relevant functional markers of T cells still require a systematic evaluation. Here we assessed 25 relevant T-cell markers in human peripheral blood mononuclear cells (PBMCs) and showed that the detection of nine membrane markers, e.g., PD-1, CTLA4, KLRG1, CD25, CD122, CD127, CCR7 and others reflecting exhaustion, senescence and other functions was reduced among at least one T-cell subset following standard processing, although the frequency of CD4, CD8 and regulatory T cells was unaffected. Nevertheless, a six-month-long cryopreservation did not impair the percentages of cells expressing many other membrane and all the eight tested intracellular lineage or functional T-cell markers. Our findings uncover that several clinically-relevant markers are particularly affected by processing and the interpretation of those results in clinical trials and translational research should be done with caution.
DOI: 10.17632/6vkhwp3t4s.1
title: LINF_170014100

description: protein kinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/5jd9srw5k6.1
title: Experimental dataset for: Experimental Measurements of Airflow Features and Velocity Distribution Exhaled from Sneeze and Speech Using Particle Image Velocimetry

description: *This is the experimental data for : "Measurements of exhaled airflow velocity through human coughs using particle image velocimetry, Build. Environ. (2021) 108293.  https://doi.org/10.1016/j.buildenv.2021.108293."
*The data contains temporal and spatial ensemble-averaged velocity distribution of sneeze airflow shown in Fig.4-Fig.6, and ensemble-averaged distribution of the time-averaged velocity of speech airflow shown in Fig.8-Fig.9 of the paper.
*The female and male data are ensemble-averaged together in different folders.
DOI: 10.5517/ccdc.csd.cc25sy0y
title: CCDC 2019960: Experimental Crystal Structure Determination

description: Related Article: Timothy J. Boyle, Michael L. Neville, Jeremiah M. Sears, Roger Cramer|2016|Chem. Sel.|1|473|doi:10.1002/slct.201600138
DOI: 10.17632/fcdvzx548s.1
title: LINF_170013700

description: polo-like protein kinase | PKL
Leishmania infantum (strain JPCM5)
DOI: 10.5517/ccdc.csd.cc25sy1z
title: CCDC 2019961: Experimental Crystal Structure Determination

description: Related Article: Timothy J. Boyle, Michael L. Neville, Jeremiah M. Sears, Roger Cramer|2016|Chem. Sel.|1|473|doi:10.1002/slct.201600138
DOI: 10.17632/mb4c2gdzmd.1
title: LINF_170013800

description: VID27 cytoplasmic protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/45skyv5hzy.1
title: Characterization of oral and cloacal microbial communities of wild and rehabilitated loggerhead sea turtles (Caretta caretta)

description: Dataset related to the publication Filek et al. 2021 "Characterization of oral and cloacal microbial communities of wild and rehabilitated loggerhead sea turtles (Caretta caretta)" 

The data here consist of raw read count with assigned taxonomy and representative sequences (raw_reads_taxonomy_sequences.csv) and extended metadata describing each sample (extended_metadata.csv). qiime2_import.txt describes the pipeline used in QIIME2 to analyze the sequences.
DOI: 10.17632/nswtk2gyxr.1
title: dijitallesirken_tasarruf_edilebilir_mi-YBD

description: Data series of article: 
"DİJİTALLEŞİRKEN TASARRUF EDİLEBİLİR Mİ? ÇALIŞAN SAYISI MI, ÇALIŞANLARIN NİTELİĞİ Mİ?", 
"IS IT POSSIBLE TO MAKE SAVINGS IN DIGITALIZATION PROCESS? QUANTITY OR THE QUALITY OF THE EMPLOYEES?"
The source of the data is the Banking Regulation and Supervision Agency of Turkey(BRSA). In order to answer the research question, the amount of loans and deposits with the number of employees are the variables gathered from the BRSA's data set for the period December 2002 to May 2021 and prepared as econometric time series. Deposits and loans are the sums of the foreign and domestic currency. They are reported in Turkish liras(domestic currency). Domestic bank personnel added to abroad bank personnel to end up with the number of employees.
DOI: 10.17632/vy4cggbtm2.1
title: Cobalt nitrate coordination polymer properties

description: The structure of the complex consists of discrete [Co (L) 6] 2+ cations and NO3- anions. The Co2 + ion has a centrosymmetric octahedron configuration with a coordination site - CoN6. The ligand is coordinated monodentate through the pyridine nitrogen atom (N3) to the Co2 + ion with an average Co – N bond distance of 2.1590Ǻ. Molecules in the coordination polymer are additionally linked by intermolecular hydrogen bonds through the pyrrole nitrogen atom (-N-H) and oxygen of the nitrate group with the formation of a polymer chain of the type: N-H… O. The chains are linked in layers along the (001) plane.
DOI: 10.17632/vd88zjfvbr.2
title: 2021_Aug An Antisense Transcript Transcribed from Irs2 Locus Contributes to the Pathogenesis of Hepatic Steatosis in Insulin Resistance

description: Uncropped images of immunoblot
DOI: 10.5517/ccdc.csd.cc26x4bm
title: CCDC 2052830: Experimental Crystal Structure Determination

description: Related Article: Hai-Lei Cui, Jia-Qin Li|2021|Asian J.Org.Chem|10|2170|doi:10.1002/ajoc.202100372
DOI: 10.15156/bio/sh0907208.09fu
title: SH0907208.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0907209.09fu
title: SH0907209.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0907210.09fu
title: SH0907210.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0907211.09fu
title: SH0907211.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0907212.09fu
title: SH0907212.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0907213.09fu
title: SH0907213.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0907214.09fu
title: SH0907214.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.