cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17104253
title: cigCK (Extended dataset)

description: This dataset is a supplementary part of the cigCK dataset, created by the Computational Interpretation Group (CIG) for the deep-learning-based simultaneous channel and karst interpretation in 3D seismic images.The main contributors are Jiarun Yang, Guangyu Wang, and Xinming Wu.

Due to the 50 GB file size limitation of Zenodo, the cigCK dataset has been divided into two separate records. This record provides the additional portion of the dataset, which follows the same data format and content structure as the first part. Together, the two records form the complete cigCK dataset.

Content description:





The dataset contains additional synthetic 3D seismic volumes and their corresponding labeled volumes, each with dimensions of 500×500×250.




In the label volumes, areas representing karsts are assigned a value of 1, channels are denoted with a value of 2, and all other regions are marked as 0.




This supplementary dataset should be used in combination with the first part of the cigCK dataset to obtain the complete set of 200 pairs of seismic and label volumes.



For more details of the dataset construction, please refer to the paper submitted to the IEEE RGSL

Yang, J., X. Wu* and G. Wang, 2025, Deep learning for simultaneous karst and channel detectionIEEE GRSL, accepted.
DOI: 10.17044/scilifelab.30084382
title: Supplementary Table 10: Ancestral sequence reconstruction for the HAO phylogeny corresponding to the study "Origin and evolution of key enzymes in the anammox pathway revisited".

description: Output table of the ancestral sequence reconstruction for the hydroxylamine oxidoreductase (HAO) phylogeny. This analysis was computed using IQ-Tree v2.2.0 and HAO alignment and phylogenetic tree as input.The table contains the following columns:- Node: Node name in the phylogenetic tree.- Site: Position number of the predicted sequence at the specific Node.- State: Most likely state (amino acid) assigned by the test. Uncertain states are represented by "-".- p_X: Posterior probability for state X (empirical Bayesian method) estimated by the test. There is one column per amino acid.<br>
DOI: 10.17044/scilifelab.30084382.v1
title: Supplementary Table 10: Ancestral sequence reconstruction for the HAO phylogeny corresponding to the study "Origin and evolution of key enzymes in the anammox pathway revisited".

description: Output table of the ancestral sequence reconstruction for the hydroxylamine oxidoreductase (HAO) phylogeny. This analysis was computed using IQ-Tree v2.2.0 and HAO alignment and phylogenetic tree as input.The table contains the following columns:- Node: Node name in the phylogenetic tree.- Site: Position number of the predicted sequence at the specific Node.- State: Most likely state (amino acid) assigned by the test. Uncertain states are represented by "-".- p_X: Posterior probability for state X (empirical Bayesian method) estimated by the test. There is one column per amino acid.<br>
DOI: 10.15468/dl.hgaany
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cryptocoryne crispatula",
 "Country is Austria",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006754-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uj9wkh
title: Occurrence Download

description: A dataset containing 1570 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pyrrhobryum mnioides"
 ]
}

 The dataset includes 1570 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006753-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60873/fk2/rxfedu
title: Niterói - Passageiros mensais por linha [Abril 2025]

description: Estimativa do número total de passageiros transportados por linha de ônibus no transporte público de Niterói no mês de abril de 2025. Ver Metodologia para mais detalhes sobre a estimação do número de passageiros transportados.
DOI: 10.15468/dl.u597dj
title: Occurrence Download

description: A dataset containing 406659 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Living Specimen, Specimen, Fossil, Material citation, Material sample, Machine Observation)"
 ]
 }
 },
 "TaxonKey is Lolium perenne",
 "Year is greater than or equal to 1981",
 "Year is less than or equal to 2010"
 ]
}

 The dataset includes 406659 records from 756 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006687-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e4fn7j
title: Occurrence Download

description: A dataset containing 59951 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-72.46012 -23.4275,-72.77676 -28.51912,-71.45612 -29.57387,-74.72981 -37.34996,-73.25494 -41.05963,-73.26351 -44.48137,-74.73795 -48.27993,-75.35031 -53.4243,-71.73624 -56.13485,-67.01332 -57.32585,-64.85001 -55.02733,-65.202 -49.84342,-61.76631 -44.81778,-62.65786 -38.95901,-66.00805 -36.83042,-65.0477 -33.16593,-65.27383 -29.26323,-64.30676 -22.5438,-65.37387 -21.49337,-68.77527 -24.2445,-69.50891 -22.14363,-72.46012 -23.4275))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phrygilus gayi",
 "Year 1970-2025"
 ]
}

 The dataset includes 59951 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006669-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83wrbw
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Diplomystes camposensis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006757-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10781509
title: cigCK: A data of 3D synthetic seismic volumes with labeled channels and karsts for deep-learning-based simultaneous channel and karst interpretation

description: cigCK is a dataset created by the Computational Interpretation Group (CIG) for the deep-learning-based simultaneous channel and karst interpretation in 3D seismic images. Jiarun Yang, Guangyu Wang, and Xinming Wu are the main contributors to the dataset.

This dataset contains 200 pairs of synthetic 3D seismic images and the corresponding label images with the ground truth of channels and karsts simulated in the seismic images. More detail of building this dataset is discussed in the paper submitted to the journal of JGR Solid Earth:

Yang, J., X. Wu* and G. Wang, 2025, Deep learning for simultaneous karst and channel detectionIEEE GRSL, accepted.

Below are some brief descriptions of the dataset:





The "gx" data is split into multiple parts due to file size limitations. Specifically, it contains gx.zip.001 – gx.zip.011. Please note that the file gx.zip.010 is hosted separately at the following Zenodo record: https://zenodo.org/records/17104253. All parts need to be downloaded and concatenated to reconstruct the full gx dataset, which includes 200 3D seismic volumes, each with dimensions of 500×500×250.




The "lx.zip" file contains 200 corresponding label volumes, also with dimensions of 500×500×250. In a label image, areas representing karsts are assigned a value of 1, channels are denoted with a 2, and all other regions are marked as 0, which is why the compressed label images in lx.zip are much smaller than the seismic images compressed in gx.
DOI: 10.5281/zenodo.12806267
title: cigCK: A data of 3D synthetic seismic volumes with labeled channels and karsts for deep-learning-based simultaneous channel and karst interpretation

description: cigCK is a dataset created by the Computational Interpretation Group (CIG) for the deep-learning-based simultaneous channel and karst interpretation in 3D seismic images. Jiarun Yang, Guangyu Wang, and Xinming Wu are the main contributors to the dataset.

This dataset contains 200 pairs of synthetic 3D seismic images and the corresponding label images with the ground truth of channels and karsts simulated in the seismic images. More detail of building this dataset is discussed in the paper submitted to the journal of JGR Solid Earth:

Yang, J., X. Wu* and G. Wang, 2025, Deep learning for simultaneous karst and channel detectionIEEE GRSL, accepted.

Below are some brief descriptions of the dataset:





The "gx" data is split into multiple parts due to file size limitations. Specifically, it contains gx.zip.001 – gx.zip.011. Please note that the file gx.zip.010 is hosted separately at the following Zenodo record: https://zenodo.org/records/17104253. All parts need to be downloaded and concatenated to reconstruct the full gx dataset, which includes 200 3D seismic volumes, each with dimensions of 500×500×250.




The "lx.zip" file contains 200 corresponding label volumes, also with dimensions of 500×500×250. In a label image, areas representing karsts are assigned a value of 1, channels are denoted with a 2, and all other regions are marked as 0, which is why the compressed label images in lx.zip are much smaller than the seismic images compressed in gx.
DOI: 10.15468/dl.rfr7f6
title: Occurrence Download

description: A dataset containing 250429 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sargocentron praslin, Sargocentron punctatissimum, Sargocentron rubrum, Sargocentron seychellense, Sargocentron spiniferum, Sargocentron tiere, Sargocentron violaceum, Sargocentron xantherythrum, Apogon atricaudus, Apogon aurolineatus, Apogon binotatus, Apogon coccineus, Apogon crassiceps, Apogon doryssa, Apogon dovii, Apogon erythrinus, Apogon imberbis, Apogon lachneri, Apogon maculatus, Apogon phenax, Apogon planifrons, Apogon pseudomaculatus, Apogon quadrisquamatus, Apogon retrosella, Apogon semiornatus, Apogon townsendi, Apogonichthyoides melas, Apogonichthyoides nigripinnis, Apogonichthyoides opercularis, Apogonichthyoides pharaonis, Apogonichthyoides sialis, Apogonichthyoides taeniatus, Apogonichthyoides timorensis, Archamia bleekeri, Astrapogon stellatus, Cheilodipterus artus, Cheilodipterus lachneri, Cheilodipterus parazonatus, Cheilodipterus persicus, Cheilodipterus quinquelineatus, Cheilodipterus zonatus, Fibramia thermalis, Foa brachygramma, Foa, Fowleria flammea, Fowleria variegata, Lepidamia multitaeniata, Nectamia bandanensis, Nectamia fusca, Nectamia luxuria, Nectamia savayensis, Ostorhinchus angustatus, Ostorhinchus apogonoides, Ostorhinchus aureus, Ostorhinchus chrysopomus, Ostorhinchus chrysotaenia, Ostorhinchus compressus, Ostorhinchus cookii, Ostorhinchus cyanosoma, Ostorhinchus dispar, Ostorhinchus doederleini, Ostorhinchus endekataenia, Ostorhinchus fasciatus, Ostorhinchus flavus, Ostorhinchus franssedai, Ostorhinchus hartzfeldii, Ostorhinchus hoevenii, Ostorhinchus holotaenia, Ostorhinchus kiensis, Ostorhinchus luteus, Ostorhinchus maculiferus, Ostorhinchus margaritophorus, Ostorhinchus neotes, Ostorhinchus nigrofasciatus, Ostorhinchus notatus, Ostorhinchus novemfasciatus, Ostorhinchus parvulus, Ostorhinchus properuptus, Ostorhinchus sealei, Ostorhinchus taeniophorus, Paroncheilus affinis, Phaeoptyx pigmentaria, Pristiapogon exostigma, Pristiapogon fraenatus, Pristiapogon kallopterus, Pristiapogon taeniopterus, Pristicon rhodopterus, Pristicon trimaculatus, Pseudamia amblyuroptera, Lutjanus synagris, Quinca mirifica, Rhabdamia gracilis, Siphamia fuscolineata, Sphaeramia nematoptera, Sphaeramia orbicularis, Taeniamia leai, Taeniamia macroptera, Taeniamia pallida, Taeniamia zosterophora, Verulux cypselurus)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 250429 records from 439 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006728-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7faay6
title: Occurrence Download

description: A dataset containing 3363892 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 3363892 records from 3572 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018588-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e2me3a
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potamogeton ×lintonii Fryer"
 ]
}

 The dataset includes 40 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093622-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gr7vrk
title: Occurrence Download

description: A dataset containing 153718 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Euphydryas aurinia (Rottemburg, 1775), Euphydryas cynthia (Denis & Schiffermüller, 1775), Euplexia lucipara (Linnaeus, 1758))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 153718 records from 555 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0357114-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjxf9z
title: Occurrence Download

description: A dataset containing 730325 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantago major L."
 ]
}

 The dataset includes 730325 records from 2379 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0098659-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/rjw7b93n2j.1
title: In-School Leisure Reading Increases Reading Motivation: Results from an Adolescent Quasi-Experimental Study

description: Student-level data from Chile. Pre and post measures for reading motivation, reading amount and reading engagement.
DOI: 10.5281/zenodo.10877237
title: Multi-SpinX: An Advanced Framework for Automated Tracking of Mitotic Spindles in Multicellular Environments

description: Time-lapse movies, and tracking results, used to assess Multi-SpinX have been deposited.
DOI: 10.5281/zenodo.10877238
title: Multi-SpinX: An Advanced Framework for Automated Tracking of Mitotic Spindles in Multicellular Environments

description: Time-lapse movies, and tracking results, used to assess Multi-SpinX have been deposited.
DOI: 10.21227/he66-fa61
title: Multi-perspective Traffic Video Recording

description: This dataset was produced as part of the NANCY project (https://nancy-project.eu/), with the aim of using it in the fields of communication and computer vision. Within the dataset are contained three different scenarios, each of which has three videos. All three videos were captured by different devices; a vehicle-mounted unit, a roadside unit (RSU), and a drone. These devices were placed at different locations, with different angles and heights but all facing the same area of interest, providing multiple different views of the desired location. The present architecture offers the integration of complementary data, offering a richer and more comprehensive understanding of the observed area. Additionally, the dataset was tailored made for use in semantic communications (SemCom). By using SemCom the above dataset provides a more precise and enriched understanding of the area of interest. This is achieved by transmitting only meaningful and context-aware information rather than raw data, significantly reducing data traffic while at the same time enhancing the quality of insights.The NANCY project has received funding from the Smart Networks and Services Joint Undertaking (SNS JU) under the European Union's Horizon Europe research and innovation programme under Grant Agreement No 101096456.
DOI: 10.17632/v8syy4jw2b.3
title: Data for "Experimental and CFD Study of Air Distribution System and Airflow Rate Impact on Airborne Transmission Across Different Occupancy Patterns"

description: All experimental measurement data are provided in the MS Excel file titled "SupplementaryMaterial.xlsx." The file includes an introduction with a brief explanation of how to use the data, as well as the full measurements, organized for ease of use. The specific spreadsheets titled "Recapitulation" and "Recapitulation - Transient" contain a summary of all measurements. Additionally, the file provides details regarding the sensor locations, selected diffuser velocity measurements and Mesh Independence Study.
A 3D model of the room is provided in a .stp file, which can be loaded by most 3D modeling software, including SpaceClaim, in which the model was created.
DOI: 10.17632/v8syy4jw2b.1
title: Data for "Experimental and CFD Study of Ventilation Type and Airflow Rate Impact on Airborne Transmission Across Different Occupancy Patterns"

description: All experimental measurement data are provided in the MS Excel file titled "SupplementaryMaterial.xlsx." The file includes an introduction with a brief explanation of how to use the data, as well as the full measurements, organized for ease of use. The specific spreadsheets titled "Recapitulation" and "Recapitulation - Transient" contain a summary of all measurements. Additionally, the file provides details regarding the Mesh Independence Study.
DOI: 10.17632/v8syy4jw2b.2
title: Data for "Experimental and CFD Study of Air Distribution System and Airflow Rate Impact on Airborne Transmission Across Different Occupancy Patterns"

description: All experimental measurement data are provided in the MS Excel file titled "SupplementaryMaterial.xlsx." The file includes an introduction with a brief explanation of how to use the data, as well as the full measurements, organized for ease of use. The specific spreadsheets titled "Recapitulation" and "Recapitulation - Transient" contain a summary of all measurements. Additionally, the file provides details regarding the sensor locations, selected diffuser velocity measurements and Mesh Independence Study.
DOI: 10.15468/dl.darsfs
title: Occurrence Download

description: A dataset containing 770 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.33249 -18.00941,-69.67598 -18.00941,-69.67598 -14.60541,-75.33249 -14.60541,-75.33249 -18.00941))",
 "HasGeospatialIssue is false",
 "TaxonKey is Vanellus resplendens (Tschudi, 1843)",
 "Year 2021-2025"
 ]
}

 The dataset includes 770 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004667-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gner5y
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "GadmGid is BRA.20_1",
 "TaxonKey is Blechnaceae"
 ]
}

 The dataset includes 29 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004668-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/ggcmfjns65.1
title: A family of bacterial Josephin-like deubiquitinases with an irreversible cleavage mode. Hermanns et al

description: Raw data of all gels and blots
DOI: 10.15468/dl.zr53c7
title: Occurrence Download

description: A dataset containing 266927 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Festuca ovina L."
 ]
}

 The dataset includes 266927 records from 1114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004584-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/ggcmfjns65.2
title: A family of bacterial Josephin-like deubiquitinases with an irreversible cleavage mode. Hermanns et al

description: Raw data of all gels and blots
DOI: 10.15468/dl.htz59x
title: Occurrence Download

description: A dataset containing 87491 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Tockus leucomelas (M.H.K.Lichtenstein, 1842))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 87491 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004666-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.snpqar
title: Occurrence Download

description: A dataset containing 578 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.53154 -18.44231,-68.96514 -18.44231,-68.96514 -14.59911,-75.53154 -14.59911,-75.53154 -18.44231))",
 "HasGeospatialIssue is false",
 "TaxonKey is Charadrius semipalmatus Bonaparte, 1825",
 "Year 2021-2025"
 ]
}

 The dataset includes 578 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004669-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.