cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/nfvpcd9wpf
title: Trends in U.S. self-reported health and self-care behaviors during the COVID-19 pandemic

description: These data files and analytic scripts will allow you to reproduce the analyses conducted for the following publication:

Hooper, M, Reinhart, M, Walsh, C, Griffith, K. (under review). "Trends in U.S. self-reported health and self-care behaviors during the COVID-19 pandemic." Manuscript submitted to PLOS ONE.
DOI: 10.17632/j6t2ttfjws
title: Pursuing social class and death anxiety

description: Previous research has illustrated many factors that probably drive people to pursue higher social class. In this research, we argued that death anxiety motivated people to pursue higher social class. Two studies provided supportive evidence. Study 1 A total of 1847 adults who had work experiences participated in the present study via Sojump (www.wjx.cn). The survey was administered online. All participants need to sign a consent form before formal survey. During formal survey, participants first reported some demographic information, including gender, age, hukou (rural vs. urban residents), education, and household income. Then, subjective socioeconomic status (SES) was measured with the MacArthur scale (Adler, Epel, Castellazzo, & Ickovics, 2000), in which participants were asked to assess their current SES on a 10-rung ladder with greater number representing a higher SES. To measure individuals’ indirect death-related experience, we asked participants indicate the extent to which they agree on the statement: “I have bereavement experience in the last five years” . Thereafter, participants were asked to choose three out of seven factors that are deemed to be important in considering a job. These seven factors include two social-class relevant ones (income and status) and five social class irrelevant ones (professional counterparts, personal development, job welfare, settling down and working condition). If participants considered other factors beyond these options, they were required to choose “other” and wrote it down. Then participants needed to rank the three chosen factors in terms of their importance. Study 2 A total of 135 adults were used in the study. All participants completed this online experiment during one week. They were asked to sign the informed consent at first, and then reported some demographic information, including gender, age, household income, education level, and current occupation. Next, participants were randomly assigned into death anxiety condition or control condition following a typical protocol of mortality salient manipulation (Burke et al., 2010, Rosenblatt, et al., 1989). Subsequently, participants were introduced into another alleged unrelated study about conception cognitive survey. They were presented two questions about the meaning of top social class: 1) how much household income a top social class family should reach (unit: ten-thousand yuan), and 2) what level of education should a top social-class person reach. In addition, three items were used to measure individual’s motivation on pursuing high social class (adapted from Belmi & Pfeffer, 2016). All items were assessed on a 7-point scale from 1 (strongly disagree) to 7 (strongly agree). Wei Cai, weicaicc@gmail.com
DOI: 10.17632/kzw8f8232p
title: Data for: Lithium recovery : Shale gas produced water, including organic compounds through solvent extraction

description: The extraction of ions during solvent extraction.
DOI: 10.17632/54d84d88p8
title: NEUTRON: Neural Particle Swarm Optimization for Material-Aware Inverse Design of Structural Color

description: This is the dataset accompanying the paper NEUTRON: Neural Particle Swarm Optimization for Material-Aware Inverse Design of Structural Color.
DOI: 10.17632/tfjcr2vfg9
title: Patent Data Set - LATAM

description: Data used to calculate the QILAP was extracted from the Derwent Innovation database of 106,592 granted patents belongs to the period 1900-2017 from Latin-American inventors in the offices of Argentina, Bolivia, Brazil, Chile, Colombia, Costa Rica, Cuba, Dominican Republic, Ecuador, Guatemala, Guayana, Mexico, Nicaragua, Panama, Peru, Uruguay and Venezuela.
DOI: 10.6084/m9.figshare.5734638.v1
title: Sensory evaluation and antioxidant capacity as quality parameters in the development of a banana, strawberry and juçara smoothie

description: Abstract In the present study a banana, strawberry and juçara smoothie was developed using an experimental mixture design. The juçara proportion was kept constant while the banana:strawberry ratio varied and the main responses were the sensory acceptability and the antioxidant capacity. From five formulations, only the one with the highest percentage of strawberry was rejected, most likely due to its lower sugar content and higher acidity. In general, panelists chose the sweeter formulations, which were those with a higher percentage of banana. Relating to the consistency, the best formulation was the one containing the same proportion of strawberry and banana pulp, which provided a better flow to the product. Additionally, this sample showed intermediate values of phenolic compounds and antioxidant capacity, as well as desirable physicochemical characteristics. In spite of being possible to obtain four formulations with good sensory acceptance, the one with equal amounts of banana and strawberry pulp is highlighted due to its antioxidant capacity and sensory characteristics, statistically corroborated by the desirability function.
DOI: 10.17632/rwhp4fcwzg
title: Apoyo social percibido por mujeres gestantes de Santa Marta, Colombia

description: En este repositorio se encuentra la base de datos utilizada para la elaboración del artículo titulado "Apoyo social percibido por mujeres gestantes de Santa Marta, Colombia: un análisis comparativo", publicado por la Revista Cuidarte. El archivo contiene dos hojas en Microsoft Excel, la primera con los datos numéricos obtenidos de los instrumentos de evaluación, y la segunda con las descripciones y codificaciones establecidas por los investigadores para realizar el análisis estadístico reportado en el manuscrito. Toda la información se recolectó con previo consentimiento informado. Además, la participación mantuvo de forma anónima para preservar la identidad y privacidad de las mujeres gestantes.
DOI: 10.6084/m9.figshare.1406932.v1
title: Aerobic growth of Bacillus subtilis NRS-762 in LB Lennox (unbuffered) medium at 25 deg C

description: This is a dataset containing the time course evolution of optical density (at 600 nm) and pH variation that describes aerobic growth of <em>Bacillus subtilis</em> NRS-762 (ATCC 8473) in LB Lennox (unbuffered) medium at 25 oC (room temperature) on a non-temperature controlled orbital shaker. The shaking speed was 250 rpm, and the culture format was 250 mL glass shake-flasks containing 100 mL medium. Optical density was measured using a Shimadzu Biospec Mini UV-Visible Spectrophotometer, and pH of culture broth monitored via a Mettler Toledo AE-100 pH meter outfitted with an Orion pH electrode. While <em>B. subtilis</em> NRS-762 exhibited good growth till 22.5 hours post-inoculation, drastic decline in optical density occurred after attainment of maximal optical density. Significantly, cellular debris was also absent in the shake-flasks after autoclave decontamination at 121 oC for 20 minutes. Flies were also observed on and around the cotton plug of the shake-flasks after evolution of a pungent odour during stationary phase. The aforementioned observations suggested possible interkingdom signaling between<em> B. subtilis</em> and flies via a volatile compound secreted by the bacterium. Coincidence of flies attraction with stationary phase further point to possible long-range dispersal function of volatile compound-mediated interkingdom signaling upon nutritional stress. A coherent conceptual model has been put forward in describing the observations, and is available at <em>PeerJ Preprints</em>, “Possible odour-mediated attraction of flies to <em>Bacillus subtilis</em> NRS-762 stationary phase culture.” (https://peerj.com/preprints/541v2/) Release of the original dataset would hopefully help interested researchers determine the extent of reproducibility, and also serve as reference data for comparing the growth performance of the bacterium with other microbes under similar conditions.
DOI: 10.17632/5n2s4fkhz6
title: Uncovering Test Pilots' Risk Framework

description: Survey and interview data collected from experimental flight test crews in late 2022. Data reports the risk management framework used by experimental flight test crews in undertaking uniquely hazardous activities that include the consequence of death - precluding any ability to learn in subsequent iterations of the activity. Data was used to investigate the risk management framework adopted by the flight test crews to risk manage their work, with the objective of generalising this knowledge for application beyond the flight test profession.
DOI: 10.6084/m9.figshare.27791184.v3
title: Dataset for figures of Photoinduced hidden monoclinic metallic phase of VO<sub>2</sub>.

description: This is a dataset for publications of "Photoinduced Hidden Monoclinic Metallic Phase of VO₂" at Nature Communications.
DOI: 10.17632/6k4tnnt4rz
title: ANN for Heat pump

description: Results of fitting regression and ANN models to manufacturer's and measured data
DOI: 10.17632/ywczyh59wk
title: Data for: Paleoecology of Aphelops and Teleoceras (Rhinocerotidae) through an Interval of Changing Climate and Vegetation in the Neogene of the Great Plains, North America

description: "Data_faunal_list" includes occurrence data for fossil mammals from the Barstovian, Clarendonian, and Hemphillian North American Land Mammal Ages. Data originally downloaded from the MioMap database. Only fossil localities that produced at least one species of ungulate are included here. "Data_isotopes" includes the stable carbon and oxygen isotope values from the tooth enamel of Hemphillian-aged rhinoceroses from the Great Plains.
DOI: 10.17632/zmy38p927p
title: Enhanced Mercury Deposition in Arctic Alaskan Lake Sediments Coincides with Early Holocene Hydroclimate Shift

description: Raw and Interpolated data and references to additional data sources
This dataset is supplement to https://doi.org/10.1016/j.scitotenv.2025.178440
DOI: 10.6084/m9.figshare.11317895.v1
title: Population Grid for China SSP2RCP4.5

description: Population Grid for China under SSP2RCP4.5 from 2010 to 2100
DOI: 10.17632/8z9jjcwmk8
title: Whole genome sequence of Paenibacillus elgii YSY-1.2, a promising chitinase-producing, plant-growth-promoting, and biocontrol agent

description: The work represents the raw reads of the whole genome sequence of Paenibacillus elgii YSY-1.2, a promising chitinase-producing, plant-growth-promoting, and biocontrol agent.
DOI: 10.17632/mg73d32md4
title: P bodies in HeLa, A549 and BJ cells – single-cell feature values

description: Data in the paper "Cellular state landscape and herpes simplex virus type 1 infection progression are connected" by Pietilä et al., 2023:
- Single-cell DDX6 mean intensity, processing body (PB) count and PB sum and mean area in HeLa and A549 cells
- A549_pBodies_two_replicates.csv (Figure 7g and Supplementary 14c)
- HeLa_pBodies_second_replicate.csv (Supplementary Figure 14a,b)

Cells were infected with HSV-1, and after fixation markers were detected by immunofluorescence imaging. P bodies were segmented, counted, and their mean area per cell was quantified. Cells were classified into uninfected and infected cells as described in the paper. Data cleanup and normalisation were applied as described in the paper. HeLa data are from one experiment. A549 data are from two independent experiments. Experimental conditions are in duplicate or triplicate (indicated by “well_name”).
DOI: 10.17632/sd4ryht7sm
title: Canal_Structures

description: The dataset “Canal_Structures.xlsx” provides detailed structural and operational characteristics of canal segments within an irrigation network. It is designed for researchers, engineers, and policymakers involved in water resource management, irrigation planning, and hydrodynamic modelling.


Key Features

 1. Dataset Scope:
 • Includes data on canal lengths, cross-sectional dimensions, irrigation areas, and operational details for each canal segment.
 • Covers primary and secondary canals, along with associated turnouts and off-take regulators.
 2. Variables Included:
 • Structural Information:
 • Canal ID, Length (km), Bed Width (m), Top Width (m), Bed Level (mPWD), and Side Slope.
 • Irrigation Details:
 • Command Area (ha), Irrigable Area (ha), and Number of Turnouts.
 • Operational Features:
 • Offtake regulator dimensions, chainage (km), invert levels, and design discharge (m³/s).
 • Water Levels:
 • Full Supply Level (mPWD), Crest Level (mPWD), and Crest Width (m).
 3. Geographical Context:
 • Data pertains to canal networks typically used for irrigation and flood control systems.



This dataset is valuable for:
 • Irrigation Network Analysis:
 • Evaluation of canal capacities and structural efficiency.
 • Water Resource Management:
 • Optimization of water delivery and irrigation coverage.
 • Hydrodynamic Modeling:
 • Integration into simulation models for predicting water flow and sediment transport.
 • Engineering Design:
 • Assessment of existing canal structures for maintenance and upgrading.
DOI: 10.6084/m9.figshare.28828349.v1
title: SRR3414629.bigWig

description: mapping
DOI: 10.6084/m9.figshare.11929983.v1
title: Pupillary Light Reflex in Ethambutol-induced Optic Neuropathy

description: Pupillary Light Reflex in Ethambutol-induced Optic Neuropathy
DOI: 10.17632/fywzyvgnkb
title: Deep scRNA sequencing reveals a broadly applicable Regeneration Classifier and implicates antioxidant response in corticospinal axon regeneration by Kim et al.2023 Samples

description: Despite substantial progress in understanding the biology of axon regeneration in the CNS, our ability to promote regeneration of the clinically important corticospinal tract (CST) after spinal cord injury remains limited. To understand regenerative heterogeneity, we conducted patch-based single cell RNA sequencing on rare regenerating CST neurons at high depth following PTEN and SOCS3 deletion. Supervised classification with Garnett gave rise to a Regeneration Classifier, which can be broadly applied to predict the regenerative potential of diverse neuronal types across developmental stages or after injury. Network analyses highlighted the importance of antioxidant response and mitochondrial biogenesis. Conditional gene deletion validated a role for NFE2L2 (or NRF2), a master regulator of antioxidant response, in CST regeneration. Our data demonstrate a universal transcriptomic signature underlying the regenerative potential of vastly different neuronal populations, and illustrate that deep sequencing of only hundreds of phenotypically identified neurons has the power to advance regenerative biology.
DOI: 10.17632/n482g7sjgb
title: Data for: A new model of alite hydration during the first day

description: The code can be copied and pasted in matlab [75] or octave [76] and will in return directly plot figure 11 right. The structure is the following: - First the user must write its input parameters. Unless the user need to change the fine details of the code it is the only place that need to be changed to simulate all the plots of the article - The second section deals with the definition of all the variables - The third section deals with the calculation of the volume of CSH - The fourth one calculates the DoH, Heat flow and critical radius from the volume of CSH - Finally, figures are plotted. Comments are already included that help to understand its structure. The associated files are the input PSD and experimental calorimetry curve from Bazzoni herself. They must be saved in the same folder as the code and be named “Bazzoni_PSD.csv” and “Bazzoni_Calo.csv”. If it does not work, try replacing all the commas of these file by semicolon (Windows default software “Notepad” and Mac “TextEdit” can do that automatically).
DOI: 10.17632/t6hzkm6rp7
title: 21 century skills

description: 21 st century skills
MS
DOI: 10.6084/m9.figshare.21112381.v2
title: Data from the manuscript "Breeding phenology of a threatened frog species using eDNA and automatic acoustic monitoring"

description: - "data_acoustic.csv": hourly acoustic data (overall maximum number of calling male chorus frogs and number of calling male chorus frogs recorded by each songmeter A, B and C) - "IPC plate 1.ddpcr" and "IPC plate 2.ddPCR": Internal positive control raw data generated by the QX200 droplet digital PCR reader and associated software (QX Manager 1.2 Standard Edition)."Sample Description 1" column indicates the name used during fieldwork, "Sample Description 2" column indicates the sample name used in the manuscript (i.e. matching with the Figure 1 of the manuscript). - "sample plate 1.ddpcr", "sample plate 2.ddpcr","sample plate 3.ddpcr": raw data of 56 eDNA samples, positive and negative controls generated by the QX200 droplet digital PCR reader and associated software (QX Manager 1.2 Standard Edition). "Sample Description 1" column indicates the name used during fieldwork, "Sample Description 2" column indicates the sample name used in the manuscript (i.e. matching with the Figure 1 of the manuscript). - ".ab1" files are the cytb Sanger sequencing chromatograms and sequences of i) the 2021 water samples for assay validation (Bracken marsh locales 1 to 3; Cecil Graham Park locales 1 and 2, Old Mill Road locales 1 to 3, Round field marsh), ii) one <em>Pseudacris maculata</em> sample used as positive control (macPC), iii) two <em>Pseudacris triseriata </em>individuals (CF14 and CF56), iv) "12R4" is a positive 2022 eDNA sample (12L3 in the manuscript, see Figure 1).
DOI: 10.6084/m9.figshare.6843794.v5
title: On the Use of the Lasso for Instrumental Variables Estimation with Some Invalid Instruments

description: We investigate the behavior of the Lasso for selecting invalid instruments in linear instrumental variables models for estimating causal effects of exposures on outcomes, as proposed recently by Kang et al. Invalid instruments are such that they fail the exclusion restriction and enter the model as explanatory variables. We show that for this setup, the Lasso may not consistently select the invalid instruments if these are relatively strong. We propose a median estimator that is consistent when less than 50% of the instruments are invalid, and its consistency does not depend on the relative strength of the instruments, or their correlation structure. We show that this estimator can be used for adaptive Lasso estimation, with the resulting estimator having oracle properties. The methods are applied to a Mendelian randomization study to estimate the causal effect of body mass index (BMI) on diastolic blood pressure, using data on individuals from the UK Biobank, with 96 single nucleotide polymorphisms as potential instruments for BMI. Supplementary materials for this article are available online.
DOI: 10.17632/dw4rrzhkft
title: Data for: "In-depth characterization of sediment contamination in stormwater infiltration basins"

description: The reported data were acquired as part of a research project investigating the characteristics of sediments accumulated in stormwater infiltration basins. Eighteen study sites were selected to encompass a diversity of urban and peri-urban catchments (residential, industrial, roads, parking lots) and hydraulic designs. In each site, a representative sample was composited from different locations in the sediment layer. Sediment samples were analyzed for:
• pedological parameters,
• major elements, 
• 6 trace metals, 
• 16 polycyclic aromatic hydrocarbons, 
• 7 polychlorinated biphenyls, 
• 12 dioxin-like polychlorinated biphenyls, 
• 17 polychlorinated dibenzodioxins and furans, 
• p-tert-octylphenol and 4-nonylphenol, 
• 25 pesticides.

Further details are provided in the file entitled “Data description”. The results are available in csv files grouped by contaminant type.
Contents in sediments are expressed in grams (g), milligrams (mg), micrograms (ug), or nanograms (ng) per kilogram of dry matter.

The results are presented and discussed in the following research article: D. Tedoldi, J. Couvidat, M. Gautier, Q. Zhan, T. Winiarski, G. Lipeme Kouyi, C. Delolme, & V. Chatain (2023) "In-depth characterization of sediment contamination in stormwater infiltration basins." Blue-Green Systems, https://doi.org/10.2166/bgs.2023.039
DOI: 10.6084/m9.figshare.24541216.v1
title: Supplementary Material for: The Effect of Astragalus on Humoral and Cellular Immune Response: A Systematic Review and Meta-Analysis of Human Studies

description: Objective: Astragalus is used in traditional Chinese medicine for immune system disorders. Its effect on immune system function is evaluated in multiple studies. The objective of this systematic review and meta-analysis was to evaluate the effect of Astragalus on humoral and cellular immune response in human studies. Methods: A comprehensive search of electronic databases was conducted to identify relevant studies published up to April 2023. Studies that assessed the impact of Astragalus on humoral and cellular immune markers were included. The data were extracted, and a random-effects meta-analysis was performed to determine the overall effect size. Subgroup analyses were conducted based on outcome measures. Results: A total of 19 studies,including 1094 human participants, were included in the meta-analysis. The analysis of humoral immune markers revealed a significant reduction in proinflammatory cytokines, including IL-2, IL-4, IL-6, IL-10, TNF-α, and IFN-ɣ, following Astragalus intervention (SMD -2.8765, 95% CI: -3.2385 to -2.5145, p &lt; 0.0001). In the cellular immunity domain, Astragalus was found to significantly increase CD3 levels and the CD4/CD8 ratio (SMD 2.4629, 95% CI: 1.9598; 2.9661). Subgroup analyses based on outcome measures supported these findings. However, substantial heterogeneity was observed among the included studies. Conclusion: This systematic review and meta-analysis provide evidence supporting the immunomodulatory effects of Astragalus on humoral and cellular response. Astragalus demonstrated a significant reduction in proinflammatory cytokines and an enhancement of cellular immune markers, suggesting its potential as a therapeutic agent for immune-related disorders.
DOI: 10.6084/m9.figshare.3556926.v1
title: Appendix A. Supplementary site description data, including climate, soil, and vegetation characteristics.

description: Supplementary site description data, including climate, soil, and vegetation characteristics.
DOI: 10.17632/6p9hxh29xs
title: Density functional theory calculations for oxidation of thiophenols by electrogenerated superoxide in N,N-dimethylformamide

description: DFT data was calculated using the Becke three-parameter Lee–Yang–Parr (B3LYP), Minnesota 06 (M06-2X), and TPSSh functionals implemented in the Gaussian 16 Program package.
DOI: 10.17632/jpw686w9x2
title: Guanylate-Binding Protein 1 acts as a pro-viral factor for the life cycle of Hepatitis C virus

description: data to PPATHOGENS-D-23-01540R1 - [EMID:cb9fa632b60c0abe], doi 10.1371/journal.ppat.1011976
DOI: 10.17632/yzj6prb8x4
title: Happy and Happy for Families dataset for parents and children

description: Dataset of the Happy and Happy for Families project for children and parents. Totals are included for the emotional competences of awareness and regulation for parents, the competences of awareness, regulation, autonomy, social and life and well-being of children, as well as their state anxiety and total parental stress. The results show that children who participated with their families in the intervention with both video games obtained more favorable results than children who participated alone. These results are in line with the hypotheses put forward in the study, showing that the presence and participation of families is a favorable ally for enhancing the effects of the intervention.