cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12361493.v1
title: Impact of COVID 19 on Doctoral and Early Career Researchers

description: SMaRteN, in partnership with Vitae, conducated research into the impact of COVID-19 on the working lives of doctoral researchers and research staff.<br><br>SMaRteN www.smarten.org.uk The UK Research and Innovation (UKRI) funded Student Mental Health Research Network (SMaRteN) is working to support and encourage better research into student mental health. SMaRteN is based at Institute of Psychiatry, Psychology and Neurosciences at King’s College London. <br>Vitae is a non-profit programme supporting the professional and career development of researchers. www.vitae.ac.uk @vitae_news <br><br>Covid-19 and the associated lock down has caused substantive disruption to the study and work of doctoral students and researchers in universities. The response to the pandemic has varied across universities and research funders.<br><br>SMaRteN and Vitae aim to develop a national picture for how doctoral researchers and research staff have been affected by the pandemic.<br><br>​The survey includes questions relating to the impact of COVID-19 on research work, mental wellbeing, social connection. We further address the impact of COVID-19 on changes to employment outside of academia, living arrangements and caring arrangements and the consequent effect of these changes on research work. The survey considers the support provided by supervisors / line managers and by universities. <br><br>Data available here as either an SPSS or Excel download:SPSS file contains labels Excel file contains labels and brief notes about coding<br>Recoding data for CV19 impact - SPSS Syntax file describes steps taken to code data <br>CV19_impact_on_researchers - word document, export from Qualtrics of the survey. <br>Please note, data has been removed from this data set to ensure participant anonymity.<br>For further information, please contact Dr Nicola Byrom - nicola.byrom@kcl.ac.uk<br>
DOI: 10.6084/m9.figshare.24925233.v2
title: <b>Genome assembly of the rare and endangered Grantham's camellia</b>, <b>Camellia granthamiana</b>

description: The Grantham’s camellia (Camellia granthamiana Sealy) is a rare and endangered tea species that is endemic to southern China, and was first discovered in Hong Kong in 1955. Despite its high conservation value, genomic resources of C. granthamiana remain limited. Here, we present a chromosome-scale draft genome of the tetraploid C. granthamiana (2n = 4x = 60) using a combination of PacBio long read sequencing and Omni-C data. The assembled genome size is ~2.4 Gb with most sequences anchored to 15 pseudochromosomes that resemble a monoploid genome. The genome is of high contiguity, with a scaffold N50 of 139.7 Mb, and high completeness with a 97.8% BUSCO score. Gene model prediction resulted in a total 68,032 protein-coding genes with a BUSCO score of 90.9%. 1.65 Gb of repeat content was annotated, which accounts for 68.48% of the genome. The Grantham’s camellia genome assembly provides a valuable resource for future investigations on its biology, ecology, phylogenomic relationships with other Camellia species, as well as set up a foundation for further conservation measures.<br>BioProject PRJNA973839 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA973839<br>Assembly GCA_036172215 https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_036172215.1
DOI: 10.6084/m9.figshare.25335958.v1
title: Recovery of 679 metagenome-assembled genomes from different soil depths along a precipitation gradient

description: Soil contains a diverse community of organisms; these can include archaea, fungi, viruses, and bacteria. <i>In situ</i> identification of soil microorganisms is a challenge. The use of  genome-centric metagenomics enables the assembly and identification of microbial populations, allowing the categorization and exploration of potential functions living in the complex soil environment. However, the heterogeneity of the soil inhibiting microbes can lead to the discovery of microbial populations a tremendous challenge, with their functions left unknown, and difficult to culture in lab settings. In this study, using genome assembling strategies from both field core samples and enriched monolith samples, we assembled 679  highly completed  metagenome assembled genomes (MAGs). The ability to identify these MAGs from samples across a precipitation gradient in Kansas State provided insights into the impact of climate change on soil microbial populations. Metabolite modeling of the MAGs revealed that more than 80% of the microbial populations possessed carbohydrate active enzymes, capable of breaking down chitin and starch.<br>
DOI: 10.6084/m9.figshare.28845671.v4
title: Data for " Green Production of Ammonia Gas and Fertilizers via Upcycling of Soiled Diapers by <i>Zophobas morio</i>"

description: Soiled diapers, being the third-largest single consumer item in landfills and whose plastic components are estimated to take hundreds of years to decompose, negatively impact the environment. Here, experiments reveal that <i>Zophobas morio</i> larvae (superworms) can consume, digest, and upcycle soiled diapers into ammonia gas and fertilizers.
DOI: 10.6084/m9.figshare.5378347.v2
title: Heteroassociative storage of hippocampal pattern sequences in the CA3 subregion - raw data and simulation scripts

description: Heteroassociative storage of hippocampal pattern sequences in the CA3 subregion - raw data and simulation scripts
DOI: 10.6084/m9.figshare.7064510.v1
title: ITP of quercetin

description: ITP file from quercetin using SwissParam and charges from gbasis MINI for free energy calculations in water.
DOI: 10.6084/m9.figshare.23147468.v1
title: Questionnaire data from "Comparative study of attitudes and perceptions of university students in Business Administration and Management and in Education towards Artificial Intelligence".

description: Questionnaire data from "Comparative study of attitudes and perceptions of university students in Business Administration and Management and in Education towards Artificial Intelligence".
DOI: 10.6084/m9.figshare.23725428.v1
title: Revenues of the Fortune 500 Companies, 2022.docx

description: Source Compiled by the authors based on Fortune 500, 2022
DOI: 10.6084/m9.figshare.25092791.v1
title: apple leaf scan dataset

description: dataset related to Migicovsky, Z., Li, M., Chitwood, D. H., & Myles, S. (2017). Morphometrics Reveals Complex and Heritable Apple Leaf Shapes. Frontiers in Plant Science, 8, 2185. https://doi.org/10.3389/fpls.2017.02185the original dataset: https://figshare.com/articles/dataset/apple_leaf/5661919the dataset was cropped, black white inverted, and 1/10 resized for educational purpose.the rights belongs to the original dataset authors.cc-by-nc-4.0
DOI: 10.6084/m9.figshare.25658925.v1
title: Data produced in 'Optimize spatiotemporal managementschemes to mitigate impending forest carbon sink attenuation in China'

description: Achieving carbon neutrality in China requires effective forest management to address the impending attenuation of forest biomass carbon sinks (FBCS). However, the national schemes of forest management tailored for space and time are yet to be established. By taking advantage of advances in spatiotemporal investigation of forest biomass, this study derived the optimal stand biomass density and stand age in terms of forest biomass carbon sink (FBCS) across China. Accordingly, we proposed optimal spatiotemporal forest thinning and aging prevention schemes under future climates. These optimal schemes, while corresponding to intensified harvests of plantation forests, could constrain FBCS attenuation from 2003‒2020 to 2040‒2060 in China to less than 10% across different climate change scenarios. Meanwhile, intensified wood harvests will not compromise the national forest biomass carbon stock. This dataset includes the simulated forest biomass carbon sink, forest biomass carbon stock and timber supply in China under different climate change and forest management scenarios.
DOI: 10.6084/m9.figshare.28001450.v9
title: GBM-Reservoir: Dataset and Segmentations

description: In this repository, we present a brain tumor database collection comprising 23,049 samples, with each sample including four different types of MRI brain scans: FLAIR, T1, T1ce, and T2. Additionally, two segmentation masks (ground truth) are provided for each sample. The first mask is the raw output from the registration process, while the second is a post-processed version of the first, designed to simplify interpretation and optimize it for network training. These samples have been acquired via registration process of 438 samples available at the moment of registration from the original dataset provided by the BraTS 2022 Challenge. Registering each pair of existing brain scans results in two additional scans that retain a similar brain shape while featuring varying tumor locations. Consequently, by registering all possible pairs, a dataset originally consisting of n samples can be expanded to n<sup>2</sup> samples. The original dataset was collected from different institutions under standard clinical conditions, but with different equipment and imaging protocols. As a result, the image quality is heterogeneous, reflecting the diversity of clinical practices across institutions. This dataset can be utilized for various tasks, such as developing fully automated segmentation algorithms for new, unseen brain tumor cases, particularly through deep learning-based approaches, since ground truth is provided for each sample.
DOI: 10.17632/68g278cx8t
title: NIRS Transfusion data set

description: Xcel spread sheet
DOI: 10.6084/m9.figshare.21173725.v1
title: Image Casava dataset

description: Image Casava dataset
DOI: 10.6084/m9.figshare.22403122.v2
title: ADESÃO DOS MUNICÍPIOS AO PROGRAMA INFORMATIZA APS DO SISTEMA ÚNICO DE SAÚDE NO BRASIL: UM CAMINHO À EQUIDADE EM SAÚDE DIGITAL? (Tabela 1 e Tabela 2)

description: Os dados apresentados são resultados de uma pesquisa que tem por objetivo avaliar a relação entre fatores socioeconômicos, de infraestrutura digital e o contexto de adesão dos municípios brasileiros ao “Programa Informatiza APS” na perspectiva do fortalecimento da equidade em saúde.
DOI: 10.6084/m9.figshare.24624801.v2
title: <b>VENICE </b><b>AND DIAGHILEV'S FATEFUL PERFORMANCE</b>

description: Venicebecame for Diaghilev the space that replaced St. Petersburg. Both Veniceand St. Petersburgwere museum cities. They had a significant number of architectural and sculptural monuments, which gave them solemnity and pomp. It is precisely the contradictory perception of the city that allows us to speak of Venice's boundary. It acts as a dividing line between land and water, city and mirage, life (beauty) and death, objective and subjective, conscious and unconscious. InVenice, Diaghilev established his own spatial laws. He associated with Venetian space existentials of his own existence, including loneliness, fear, death, play, theatricality.
DOI: 10.6084/m9.figshare.27009724.v1
title: Data for Relaxed Sequence Optimization Paper

description: This dataset contains the data for the manuscript 'Scaleable protein design using optimization in a relaxed sequence space'It is included:negative stain TEM micrographspdb files and datafiles for in silico and experimental tested proteinsExemplar notebook with the codebase to design proteinsNotebook to perform the replacement scanThe 76 proteins tested in a HTP fashion are stored under in silico_tested/Binders/X/good<br>
DOI: 10.6084/m9.figshare.28319894.v1
title: dataset

description: 300 Zelensky's Instagram Posts about the Russia-Ukraine War
DOI: 10.6084/m9.figshare.3563439.v1
title: Appendix B. Additional description of the methods used to determine gannet tissue and environmental baseline stable isotope ratios.

description: Additional description of the methods used to determine gannet tissue and environmental baseline stable isotope ratios.
DOI: 10.6084/m9.figshare.11379402.v1
title: Supplementary Material for: Hourly Fluid Balance in Patients Receiving Continuous Renal Replacement Therapy

description: <b><i>Introduction:</i></b> Little is known about early (first 48 h) hourly and cumulative fluid balance (FB) during continuous renal replacement therapy (CRRT). <b><i>Objectives:</i></b> To study the characteristics and outcome associations of early hourly and cumulative FB. <b><i>Methods:</i></b> We studied FB in CRRT patients (2016–2018). <b><i>Results:</i></b> Among 350 patients, mean hourly FB became negative after 20 CRRT hours, but within 6 CRRT hours in patients with baseline fluid overload. A negative early FB was never achieved in patients receiving vasopressor therapy (<i>p</i> &lt; 0.001). Mortality was 31%. The percentage of hourly negative FB was independently associated with decreased ICU mortality. A time-weighted hourly FB between 18.5 and –33 mL/h was also significantly and independently associated with decreased mortality. <b><i>Conclusions:</i></b> In CRRT patients, an early FB conservative approach is possible, modulated by patient characteristics, and associated with a low mortality. Moreover, avoidance of an early positive FB is associated with decreased mortality.
DOI: 10.6084/m9.figshare.27266790.v1
title: Data of "<b>The Automatic </b><b>Packing Box</b><b> Positioning of Production Line in Digital Twin Logistics System Based on YOLOv8</b>"

description: Data of "<b>The Automatic </b><b>Packing Box</b><b> Positioning of Production Line in Digital Twin Logistics System Based on YOLOv8</b>"
DOI: 10.6084/m9.figshare.28600832.v1
title: Supplementary Material for: Jejunal Lipoma-Induced Intussusception Mimicking Crohn's Disease: A Case Report

description: Small bowel intussusception is a rare occurrence in adults and typically indicates an underlying gastrointestinal (GI) pathology, which may include solid masses or chronic inflammatory conditions like Crohn's disease. We present a complex case involving a patient with a history of Crohn’s and GI bleeding, who was found to have a bleeding lipoma serving as a lead point for intussusception.
We present a 70-year-old male with a history of Crohn’s and chronic GI bleeding, necessitating blood transfusions and iron infusions. Labs revealed a hemoglobin of 6.8 g/dL, iron 18 µg/dL, ferritin 13 ng/dL. The patient reported dark stools (guaiac positive), abdominal pain, and fatigue, but denied any hematochezia. Initial endoscopic examinations revealed gastritis but were otherwise inconclusive. Capsule endoscopy identified a bleeding site in the proximal jejunum along with ulcerations in the jejunum and ileum, consistent with Crohn's. The patient was started on mesalamine, which effectively controlled his symptoms but did not resolve his anemia. A double-balloon enteroscopy revealed a 5-cm frond-like villous mass in the jejunum, without active inflammation. Subsequent imaging with computed tomography (CT) and magnetic resonance enterography (MRE) confirmed the presence of a jejunal lipoma, which was acting as a lead point for intussusception. The patient underwent a laparoscopic small bowel resection with jejuno-jejunal anastomosis. The surgery was well tolerated, and his hemoglobin levels have remained stable postoperatively.
In adults, approximately 90% of intussusceptions are attributed to a pathological lead point. In Crohn's, inflammatory infiltrates can form granulomas that act as a lead point. Similarly, solid tumors, such as lipomas, can also serve as lead points. In this patient, the lipoma was initially obscured by the Crohn’s diagnosis, complicating the identification of the intussusception source and subsequent treatment. Given the rarity of symptomatic small bowel lipomas, there is no consensus on their management. However, surgical intervention is generally recommended because it is challenging to rule out malignancy, and management guidelines for colonic lipomas are often applied. This case exemplifies the importance of considering multiple underlying pathologies in patients with complex GI symptoms and highlights the need for a thorough diagnostic approach to guide effective treatment.
DOI: 10.23645/epacomptox.6062602.v1
title: Chemistry Dashboard Data: Physprop Analysis Readme

description: PhysProp Anlysis ReadMe file from the CompTox Chemistry Dashboard. The Chemistry Dashboard is part of a suite of dashboards developed by EPA to help evaluate the safety of chemicals. It provides access to a variety of information on over 700,000 chemicals currently in use. Within the Chemistry Dashboard, users can access chemical structures, experimental and predicted physicochemical and toxicity data, and additional links to relevant websites and applications. It maps curated physicochemical property data associated with chemical substances to their corresponding chemical structures. These data are compiled from sources including the EPA�s computational toxicology research databases, and public domain databases such as the National Center for Biotechnology Information�s PubChem database.
DOI: 10.6084/m9.figshare.19375493.v1
title: Updated data extraction sheet COVID vaccine 18.12.2021.xlsx

description: Extracted data from vaccine safety studies
DOI: 10.6084/m9.figshare.28500687.v1
title: The relationship between environmentally induced emotion and memory for a naturalistic virtual experience

description: Emotional stimuli (e.g. words, images) are often remembered better than neutral stimuli. However, little is known about how memory is affected by an environmentally induced emotional state (without any overtly emotional occurrences) – the focus of this study. Participants were randomly assigned to discovery (<i>n </i>= 305) and replication (<i>n </i>= 306) subsamples and viewed a desktop virtual environment before rating their emotions and completing objective (i.e. item, temporal-order, duration) and subjective (e.g. vividness, sensory detail, coherence) memory measures. In both samples, a Partial Least Squares Correlation analysis showed that an emotional state characterised by high negative emotion (i.e. threat, fear, anxiety) and arousal was reliably associated with better memory in both objective (i.e. item) and subjective (i.e. vividness and sensory detail) domains. No reliable associations were observed for any temporal memory measures (objective or subjective). Thus, an environmentally induced state of negative emotion corresponds with enhanced memory for indices of episodic memory pertaining to “what” happened, but not necessarily “when” it happened.
DOI: 10.6084/m9.figshare.5767008.v1
title: http://dblp.l3s.de/dblp.rdf-pageRank.hdt

description: This datasets contains the PageRank scores computed over the RDF graph using PageRankRDF (https://github.com/WDAqua/PageRankRDF) of dblp in HDT format (http://www.rdfhdt.org).<br>
DOI: 10.17632/bbbcpgks8d
title: Internet Usage and Shadow Economy

description: Dataset about Shadow economy and percentage of population using Internet services
DOI: 10.17632/r57xz7mm82
title: Dataset and statistical tools for mathematical modeling of water desorption isotherms and infrared latent-spectral properties of cupuassu pulp

description: This dataset presents the water desorption isotherms and infrared spectral data of cupuassu pulp. The dataset includes desorption isotherms experimentally determined using the dynamic dewpoint isotherm (DDI) method, covering a water activity range from 0.1 to 1 at a temperature of 25 °C. Attenuated Total Reflectance Fourier Transform Infrared (ATR-FTIR) spectroscopy was used to spectrally characterize the cupuassu pulp samples. Preprocessing techniques, such as baseline correction, Standard Normal Variate (SNV), and Multiplicative Scatter Correction (MSC), were applied to enhance the quality of the spectral data. The dataset also provides MATLAB® R2023a files (The MathWorks Inc., Natick, MA, USA) where different sorption equations have been calibrated with the experimental desorption isotherms using the "Curve Fitting" tool and optimized for Gibbs free energy. Additionally, the dataset includes scripts for preprocessing FTIR spectra and performing Principal Component Analysis (PCA) with scores-loadings analysis, making it a comprehensive aid for researchers and decision-makers in the field. These tools are available for use in the food industry, providing a solid foundation for optimizing drying processes and improving the understanding of water sorption behavior in dehydrated cupuassu pulp. The dataset compiles the experimental desorption isotherms and infrared spectra in Excel sheets, organized according to experimental conditions and replicates.
DOI: 10.17632/v9gwtdkbr2
title: Counterproductive work behavior and Task Performance: Moderating Role of Self-Efficacy

description: This study was conducted to examine the mediating role of workplace envy in the relationship between employees' counterproductive work behavior and task performance in Pakistan's banking sector. Data was acquired from 269 people using web-based survey and questionnaires were measured on a five-point liker scale. For data analysis, SMART PLS was used to check reliability, correlation, and regression. The findings show CPWB has a significant relationship with task performance (β=0.284, p=0.000). Results of this research also confirmed the function of workplace envy in mediating the relationship between CPWB and task performance (β=0.147, p = 0.021). In contrast, self-efficacy was employed as a moderator to reach the desired level of performance (β=0.183, p = 0.000). As a result, companies should employ this crucial psychological skill of self-efficacy to deal with the negative aspects of unproductive work behavior and workplace envy in order to achieve overall organizational success. Discussion of the significance of these findings and recommendations for future research are suggested.
DOI: 10.17632/xgkp4rkyf6
title: Data for:  Causal Inference with Observational Data: A Tutorial on Propensity Score Analysis

description: This page contains the data and R codes used to produce empirical results in the main text and appendices of "Causal Inference with Observational Data: A Tutorial on Propensity Score Analysis."
DOI: 10.6084/m9.figshare.14545998.v2
title: Remote work and chilcare dataset - Controlled.xlsx

description: <i>The balancing act: A qualitative study of remote work and childcare during the COVID-19 lockdown in South Africa<br></i><br>This is the data set, informed consent form and questionnaire for the article entitled: "The balancing act: Remote work and childcare during the COVID-19 lockdown in South Africa". <br>This data should be handled confidentially and is the property of the relevant academic institution
DOI: 10.6084/m9.figshare.23984409.v1
title: Database

description: This database was used to data analysis<br>
DOI: 10.6084/m9.figshare.28686020.v2
title: Do water-energy dynamics drive plant species richness patterns on the high alpine Tibetan plateau?

description: Data for water energy dynamics manuscript
DOI: 10.6084/m9.figshare.28783517.v1
title: Exceptionally low genomic diversity in the underutilised legume Kersting’s groundnut (<i>Macrotyloma geocarpum</i>)

description: Identifying crops with novel and climate resilience traits is imperative to ensure food security. Many of these underutilised crops suffer from a lack of international recognition and without some basic understanding of their genomes and genomic diversity they will remain to be underutilised, or could even become lost, without breeding programmes being able to utilise their diversity. Kersting’s groundnut (<i>Macrotyloma geocarpum</i> (Harms) Maréchal & Baudet) is one such crop, regarded as a useful, drought tolerant and sometimes valuable legume which grows its beans underground akin to peanut. In this work, the genome of Kersting’s groundnut was sequenced and annotated and resequencing of a panel of accessions was carried out. We estimated the genome size to be small (1C = 365.4 MB) and 83.8% (306.4 MB) assembled into 10 pseudochromosomes, the haploid chromosome number. The genome is predicted to contain 33,193 genes, and 50.7% of the genome is composed of repetitive DNA.