cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24917625
title: Supplementary Material for: Association of higher n-3 polyunsaturated fatty acid consumption and aerobic exercise with lower neutrophil-to-lymphocyte ratio: Implications of anti-atherosclerotic effect of fish consumption

description: Introduction: N-3 polyunsaturated fatty acids (n-3 PUFAs), abundant in oily fish, exert anti-inflammatory cardiovascular protective effects. We aimed to investigate the association between fish-derived n-3 PUFAs, lifestyle habits, and neutrophil-to-lymphocyte ratio (NLR), which is an atherosclerotic cardiovascular disease (ASCVD) marker.
Methods: This cross-sectional study included 6,950 participants with no history of ASCVD, who underwent annual health check-ups (average age, 46.3 ± 13.0 years; male: female ratio, 58.8%) between April 2019 and March 2020 at the Health Planning Center, Nihon University Hospital. We calculated n-3 PUFA consumption using a questionnaire and the Japan National Health and Nutrition Survey. 
Results: The average fish consumption frequency and fish-derived n-3 PUFA consumption were 2.20 ± 1.28 days/week and 5.20 ± 3.11 g/week, respectively. A higher fish-derived n-3 PUFA consumption was associated with a lower NLR. Multiple-stepwise regression analysis revealed that higher fish-derived n-3 PUFA consumption and more aerobic exercise habits were significant independent determinants of lower NLR. Furthermore, higher fish-derived n-3 PUFA consumption was associated with habitual aerobic exercise habits. 
Conclusion: Thus, higher fish-derived n-3 PUFA consumption and more aerobic exercise habits may be synergistically associated with lower NLR. This association may explain the preventive effects of fish consumption on the ASCVD risk.
DOI: 10.17026/dans-xst-ughm
title: Taste, Fat and Texture Database - taste values Dutch Foods

description: A database was compiled with the most frequently consumed foods in the Netherlands and their taste intensity relative to other available foods
DOI: 10.17632/kk7c4f6473.2
title: Concentrations of anthropogenic carbon dioxide in the Prydz Bay in 2015

description: This is a dataset of concentrations of dissolved inorganic carbon (DIC), total alkalinity (TA), calculated anthropogenic CO2 based on TroCA method, calculated pH, and associated variables in the Prydz Bay, Antarctic during the Chinese Antarctic Research Expedition in 2015.
DOI: 10.18739/a2fb4wn6b
title: Radium, water isotopes, and salinity on the East Siberian Sea slope - NABOS 2018

description: Radium isotopes (radium-228 and radium-226), water isotopes (oxygen-18 and deuterium), and salinity were measured on the slope of the East Siberian Sea in coordination with the 2018 Nansen and Amundsen Basins Observational System (NABOS) expedition. Radium is continuously produced at ocean boundaries and is soluble in seawater, thus it serves as an analogue for similarly sourced sediment-derived materials. Because the Eastern Arctic shelves are the origin of the Transpolar Drift, monitoring the radium levels in this region improves our understanding of potential climate-driven changes on the transport of shelf-derived materials offshore.
DOI: 10.25430/researchdata.cab.unipd.it.00000893
title: Seismic cycle in bituminous dolostones (Monte Camicia Thrust, Central Apennines, Italy)

description: Seismic ruptures often propagate along fault zones cutting km-thick sequences of carbonates (e.g., Wenchuan Mw 7.8, 2008, China; L’Aquila Mw 6.1, 2009, Italy). As a consequence, fault rock assemblages may record the seismic cycle under a wide range of loading conditions, temperatures (up to 1250°C during co-seismic slip), and fluid-rock interactions. The Monte Camicia Thrust in the Italian Central Apennines is exhumed from ∼3 km depth. The footwall rocks are made of bituminous dolostones cut by a network of faults accommodating up to several meters of displacement. Fault slip zones are mm– to cm–thick and bounded by ultra-polished (“mirror-like”) surfaces independently of their displacement. Deformation in the studied slip zones is accommodated by cataclasis and pressure solution in carbonates, and viscous flow in the foliated bitumen. Some of the faults with displacements &gt; 0.10 m have multiple slip zones, separated by “mirror-like” surfaces, and include clasts of foliated bitumen and fragments of older slip zones sealed by calcite precipitation. We conclude that (1) slip zones record post- to inter-seismic (foliated bitumen) and co-seismic (fragments of bitumen) deformation in a fluid-rich environment (calcite precipitation) and (2) mirror-like surfaces formed during all stages of the seismic cycle.
DOI: 10.48670/moi-00184
title: Global Ocean Wind L4 Near real Time 6 hourly Observations

description: EU Copernicus Marine Service Global Ocean Wind L4 Near real Time 6 hourly Observations Product
DOI: 10.5066/p9vkkk7c
title: Photogrammetrically Controlled, Equirectangular Galileo Image Mosaics of Europa

description: The Solid State Imager (SSI) on NASA's Galileo spacecraft acquired more than 500 images of Jupiter's moon, Europa, providing the only moderate- to high-resolution images of the moon's surface. Images were acquired as observation sequences during each orbit that targeted the moon. Each of these observation sequences consists of between 1 and 19 images acquired close in time, that typically overlap, have consistent illumination and similar pixel scale. The observations vary from relatively low-resolution hemispherical imaging, to high-resolution targeted images that cover a small portion of the surface. Here we provide average mosaics of each of the individual observation sequences acquired by the Galileo spacecraft. These observation mosaics were constructed from a set of 481 Galileo images that were photogrammetrically controlled globally (along with 221 Voyager 1 and 2 images) to improve their relative locations on Europa's surface. The 92 observation mosaics provide users with nearly the entire Galileo Europa imaging dataset at its native resolution and with improved relative image locations.
DOI: 10.5281/zenodo.10004429
title: data collection for [FLAT_]UNAGI with splitting procedure

description: Edit in newest version, 15 Oct 2023:

(important) there is a bug NEMO GEOMETRIC code (advection of parameterised eddy energy; see ldfeke.F90), fixed in the present version
processed data for UNAGI using GEOMETRIC updated
FLAT_UNAGI data not updated, as the presence of advection seems to make very little difference in the sample calculations (likely because that model is uniform in the zonal direction, unlike in UNAGI where a ridge is present)
ver. 2 contains a streamlined version of the data; see ver. 1 for samples of other data not included in the article itself (e.g. FLAT_UNAGI)
=================
Data for "Energetic scale-awareness in an eddy energy constrained mesoscale eddy parameterization". Contains

NEMO modification files for "splitting" procedure algorithm
input and config files for the idealised configuration ("UNAGI" and "FLAT_UNAGI")
sample data to reproduce plots in the paper
some supplementary data from "UNAGI" and "FLAT_UNAGI"
Files collected in different zip files to avoid the need to download the whole pack in one go (e.g. if only the "splitting" algorithm source files are desired). See readme for data/folder structure.
description: Financial support from HK RGC General Research Fund 16304021 as well as the Center for Ocean Research in Hong Kong and Macau.
DOI: 10.5281/zenodo.10074311
title: Low-Velocity Structure of Subducted Oceanic Crust in the Upper Mantle: Insights from High Pressure and Temperature Elasticity Measurements of Aragonite

description: Low-Velocity Structure of Subducted Oceanic Crust in the Upper Mantle: Insights from High Pressure and Temperature Elasticity Measurements of Aragonite.
DOI: 10.5281/zenodo.10245985
title: Net Methane Production Predicted by Patch Characteristics in a Freshwater Wetland

description: Dataset supporting submitted research paper. "flux_patchdataarchive.csv" includes all plot-level data and is organized with sample locations and time in rows and data collected as headers in columns. "microbialall.csv" includes only microbial taxonomic data collected from soils in each treatment. Other files include time series data from water level and temperature sensors deployed at each treatment (n=5). Refer to 'metadata.csv' for units and descriptions of data in each file. Data collected 2021-2022. Approved by all authors.
DOI: 10.5281/zenodo.6378204
title: The LOTUS Initiative for Open Natural Products Research: frozen dataset union wikidata (with metadata)

description: Dataset present on Wikidata used in the frame of the LOTUS Initiative: https://doi.org/10.1101/2021.02.28.433265
DOI: 10.5281/zenodo.7397374
title: Data set for "Accretion cycles, structural evolution, and thrust activity in accretionary wedges with various décollement configurations: Insights from sandbox analog modeling"

description: This data set is associated with the paper, ``Accretion cycles, structural evolution, and thrust activity in accretionary wedges with various décollement configurations: Insights from sandbox analog modeling'' by Atsushi Noda, Fabien Graveleau, Cesar Witt, Frank Chanier, and Bruno Vendeville. It is currently available on doi:PREPRINT and to be submitted to the Journal of Geophysical Research, Solid Earth. When citing this data release, please cite as well the paper. Contact: Atsushi Noda, a.noda@aist.go.jp The provided zip file contains the data below. DIC ---- image: Photo images used for DIC analysis<br> |<br> |-- ROI: Image files of "Region of interest" for DIC analysis<br> |<br> |-- matdata: MATLAB data files produced by Ncorr DIC analysis<br> |<br> |-- plot: Plots produced from the MATLAB data files<br> |<br> |-- movie: Images of plots of DIC analysis<br> |<br> |-- data: Output data generated by python scripts figure ---- Output pdf files produced by python scripts Geometry ---- plot: plots for geometrical parameters<br> |<br> |-- qgis: geometrical data files (shapefile format) RAW ---- image: RAW photo images for all models<br> |<br> |-- movies: Images of photos for all models script ---- ncorr_plot_eng.py: To plot the kinematic parameters from MATLAB data file<br> |<br> |-- ncorr_plot_all.py: To plot summary diagrams for the kinematic parameters<br> |<br> |-- envelope.py: To plot theoretical taper angles<br> |<br> |-- comp_wux.py: To calculate and plot strain ratios<br> |<br> |-- plot_param.py: To plot geometrical parameters<br> |<br> |-- calc_strength.py: To calculate and plot the wedge/detachment strengths <br>
DOI: 10.5281/zenodo.7923587
title: 6th February 2023 Turkish Earthquake 1-30s RINEX database

description: Database used to study the ionospheric response to the 6th of February Turkish earthquake. The database contains both 1s and 30s time resolution RINEX
DOI: 10.5525/gla.researchdata.1538
title: Satellite video remote sensing for estimation of river discharge

description: This repository contains data used to estimate river discharge from a satellite video of the Darling River at Tilpa (Murray-Darling basin, Australia) during a flood event. It includes satellite video footage (acquired 5 February 2022, 23:12 UTC) of the flood, and data and results from HEC-RAS 2D hydraulic model simulations of the flood. Velocities from the satellite video footage were extracted using the PIVLab algorithm, available on the Mathworks File Exchange Service (http://pivlab.blogspot.com/). PIVLab masks and images used in the analysis conducted in the paper are included in this data repository
DOI: 10.6084/m9.figshare.22439086.v1
title: met_obs_data

description: The observation data of meteorology in China from 2016 to 2019
DOI: 10.6084/m9.figshare.24920019
title: Supplementary Material for: Neuronal Hyperactivity in the Hippocampus During the Early Stage of Streptozotocin-induced Type 1 Diabetes in Mice

description: Introduction Cognitive dysfunction due to reduced neuronal transmission in the brain is a major emerging complication in diabetes. However, recent neuroimaging studies have demonstrated non-linear changes including hyperactivity in the hippocampus during the early stage of diabetes. This study aimed to determine the changes in neuronal activity at a single-cell level in hippocampal CA1 pyramidal neurons in the early stage of streptozotocin-induced type 1 diabetes in mice.
Methods Whole-cell patch-clamp recordings from acute brain slices were performed in mice over 4 consecutive weeks following the induction of hyperglycaemia using streptozotocin. In addition, microdialysate was collected from CA1 area while the mice were in an arousal state. The concentrations of glutamate and GABA in the microdialysate was then measured using ultra-performance liquid chromatography with mass spectrometry.
Results CA1 Neurons in streptozotocin-induced diabetic mice exhibited higher membrane potentials (p = 0.0052), higher frequency of action potentials (p = 0.0052), and higher frequency of spontaneous excitatory post-synaptic currents (p = 0.037) compared with controls during the second week after hyperglycaemia was established. No changes in electrophysiological parameters were observed during the first, the third and the fourth week. Moreover, the diabetic mice had higher extracellular glutamate concentration in CA1 area compared with controls (p = 0.021) during the second week after the initiation of diabetes. No change in the extracellular GABA concentration was observed.
Conclusion Our study demonstrated a temporary state of neuronal hyperactivity at the single-cell level in the hippocampal CA1 region during the early stage of diabetes. This neuronal hyperactivity might be related to altered glutamate metabolism and provide clues for future brain-target intervention.
DOI: 10.6084/m9.figshare.24920238
title: Supplementary Material for: Prognostic value of a novel index combining the prognostic nutritional index and D-dimer levels for gastric cancer after gastrectomy

description: Introduction: The prognostic nutritional index and D-dimer level are two useful measures for gastric cancer prognosis. Since they each comprise different factors, it is possible to employ a more useful combined indicator. This study therefore aimed to establish a prognostic nutritional index-D score—which combines the prognostic nutritional index and D-dimer level—and validate its usefulness as a prognostic marker.
Methods: We collected data from 1,218 patients with gastric cancer who had undergone radical gastrectomy (R0) between January 2004 and December 2015. Patients were divided into three prognostic nutritional index-D score groups based on the following criteria: score 2, low prognostic nutritional index (≤46) and high D-dimer levels (&gt;1.0 µg/ml); score 1, either a low prognostic nutritional index or high D-dimer levels; and score 0, no abnormality. We then defined the PNI-D score as low (score 0 or 1) and high (score 2).
Results: The prognostic nutritional index-D score was significantly associated with overall, recurrence-free, and disease-specific survival (all log-rank P&lt;0.0001). The 5-year overall survival rates of the patients with prognostic nutritional index-D scores of low and high were 88.1% and 64.7%, respectively; their 5-year recurrence-free survival rates were 86.7% and 61.3%, respectively; and their 5-year disease-specific survival rates were 99.3% and 76.5%, respectively. Cox multivariate analysis revealed that a high prognostic nutritional index-D score was an independent, statistically significant prognostic factor for poor overall (P=0.01) survival in the patients with gastric cancer.
Conclusions: The prognostic nutritional index-D is an independent prognostic factor for patients with gastric cancer.
DOI: 10.17189/1519677
title: GO JUP POS GLL TRAJECTORY MOON CENTERED COORDS V1.0
DOI: 10.17864/1947.000461
title: Back trajectories released from ocean catchment boundaries

description: This dataset contains a subset from a dataset of 14-day back trajectories released from points along the ocean drainage basin catchment boundaries used in Craig, P. et al. (2023).

Six-hourly data from the ERA-Interim re-analysis from the European Centre for Medium Range Weather Forecasts (Dee et al., 2011) and the ROTRAJ model code (https://www.met.reading.ac.uk/~swrmethn/ROTRAJ/) were used to generate the back trajectories. Data were released every 12 hours on 17 vertical levels. The full dataset covers the years 2010-14 and contains 20.3 million trajectories per year. 

The dataset defining the ocean catchment boundaries is available from the University of Reading Research Data Archive (https://doi.org/10.17864/1947.195).

The back trajectories can be read using the Python code readtraj_example.py provided here.

Craig, P., Ferreira, D. & Methven, J. (2023). A Lagrangian perspective on the Atlantic and Pacific Precipitation-Evaporation asymmetry. JGR Atmospheres (in press).

Dee, D. et al. (2011). The ERA-Interim Reanalysis: configuration and performance of the data assimilation system. Quarterly Journal of the Royal Meteorological Society, 137, 553-597.
DOI: 10.18739/a2n58cn3b
title: Arctic Radium Isotope Observing Network (ARION) 2021- radium, water isotopes, and salinity along Laptev & East Siberian Sea margins

description: Radium isotopes are continuously produced at ocean boundaries and are soluble in seawater. Radium therefore serves as an analogue for similarly sourced shelf-derived materials, including biologically important elements such as carbon, nutrients, and trace metals. To test the hypothesis that climate change is leading to increased delivery of terrestrially-derived solutes to the Arctic Ocean, radium levels will be measured on bi-annual cruises along the Laptev and East Siberian Sea margins (to capture interannual changes) and on a first-of-its kind in situ radium isotope sampler (to capture seasonal changes). These sampling efforts will be complemented by an international network of collaborators that will contribute data to create an Arctic Radium Isotope Observing Network (ARION) that spans the Arctic Ocean and will serve the greater scientific community. This dataset contains the results of the water column measurements made on the first ARION cruise, which took place in Sept-Oct 2021 along the slopes of the East Siberian and Laptev Seas in collaboration with the Nansen and Amundsen Basin Observational Systems (NABOS) program. Parameters measured include radium-228, radium-226, oxygen-18, deuterium, and salinity.
DOI: 10.5066/p9rqjpt1
title: Geomorphometry for Streams and Floodplains in the Chesapeake and Delaware Watersheds

description: Geomorphometry for Streams and Floodplains in the Chesapeake and Delaware Watersheds was generated as part of the project Quantifying Floodplain Ecological Processes and Ecosystem Services in the Delaware River Watershed funded through the William Penn Foundation's Delaware Watershed Research fund. This dataset contains geomorphometry for streams and floodplains in the Chesapeake and Delaware River watersheds. Geomorphometry is a quantitative representation of landscape surface form (e.g., channel width and depth) obtained from digital elevation models (DEMs). The dataset contains geomorphometry derived from running 3-m DEMs through the Floodplain and Channel Evaluation Tool (FACET) version 0.1.0. FACET generates shapefiles and rasters of the stream network, cross sections, streambank point locations, floodplain extent, height above nearest drainage (HAND), and reach-scale summaries of bank height, channel width, floodplain width, and a suite of other metrics outlined in the data dictionary. These data were generated to aid in modeling the amount of sediment and nutrients trapped on floodplains or eroded from streambanks in the Chesapeake and Delaware River watersheds.
DOI: 10.6069/69e7-6667
title: Training Data of the Waveform Denoiser to separate teleseismic earthquake and noise signals

description: The datasets are hosted on DASway server. They can be downloaded with the two links provided at the bottom of the landing page (Github repository).
DOI: 10.6084/m9.figshare.24134976.v2
title: SWIR supplementary Tables

description: All tables for article: "CO<sub>2</sub>-undersaturated melt inclusions from the South West Indian Ridge record surprisingly uniform redox conditions."
DOI: 10.7924/r4m61gc19
title: Conductivity-Temperature-Depth (CTD) data as part of the OSNAP (Overturning in the Subpolar North Atlantic Program), from 2016 on the R/V Neil Armstrong

description: The Overturning of the Subpolar North Atlantic Program (OSNAP) is an effort to determine the strength of the meridional overturning circulation and associated heat and freshwater fluxes in the subpolar North Atlantic. It is a collaborative program with scientists from the U.S., U.K., Netherlands, Germany, France, Canada, and China. Together, a series of hydrographic surveys and mooring deployments have been completed across the boundaries of the Labrador Sea, Irminger Sea, Iceland Basin, and eastern subpolar North Atlantic. 

This submission contains CTD data from the Labrador Sea and Irminger Seas near southern Greenland from the AR07-02 research cruise in 2016. The primary purpose of this dataset is to aid in the calibration of moored instrumentation in the region associated with the OSNAP program. Each CTD file contains pressure-averaged data for one CTD station following the World Ocean Circulation Experiment (WOCE) format and quality specifications for CTD data. CTD sensors have been scaled with pre-cruise calibrations from their respective manufacturers. All CTD salinity measurements have been post-calibrated using bottle salinity measurements.

Additional information may be obtained by contacting Leah Trafford McRaven at ltrafford@whoi.edu
DOI: 10.5281/zenodo.8217793
title: Data (in spreadsheet format) from numerical studies of Maxwellian flow interaction with oblique collisionless shocks

description: Data generated in the numerical study of how a Maxwellian velocity distribution of ions interacts with an oblique collisionless shock modelled as a planar surface.
description: August 2023: Data update from larger runs and slight revisions to accompanying plotting software.