cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2cmf5m
title: CCDC 2193410: Experimental Crystal Structure Determination

description: Related Article: Paz Yepes, Ángel L. Suárez-Sobrino, Miguel A. Rodríguez, Alfredo Ballesteros|2023|Org.Lett.|25|1020|doi:10.1021/acs.orglett.3c00221
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d4j14
title: CCDC 2208875: Experimental Crystal Structure Determination

description: Related Article: Maxime Michelas, Yasmine K. Redjel, Jean-Claude Daran, Meriem Benslimane, Rinaldo Poli, Christophe Fliedel|2023|Inorg.Chim.Acta|549|121408|doi:10.1016/j.ica.2023.121408
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d4j25
title: CCDC 2208876: Experimental Crystal Structure Determination

description: Related Article: Maxime Michelas, Yasmine K. Redjel, Jean-Claude Daran, Meriem Benslimane, Rinaldo Poli, Christophe Fliedel|2023|Inorg.Chim.Acta|549|121408|doi:10.1016/j.ica.2023.121408
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d4j36
title: CCDC 2208877: Experimental Crystal Structure Determination

description: Related Article: Maxime Michelas, Yasmine K. Redjel, Jean-Claude Daran, Meriem Benslimane, Rinaldo Poli, Christophe Fliedel|2023|Inorg.Chim.Acta|549|121408|doi:10.1016/j.ica.2023.121408
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25405/data.ncl.21896652
title: Maillard reaction - Fluorescence results

description: The Maillard reaction can be monitored by measuring the amount of reactive primary amines. The amount of reactive free amino groups in heat-treated chitosan was measured using genipin crosslinking and fluorescence. A UV-VIS spectrophotometer (BMG LABTECH, FLUOstar Omega Microplate Reader) was used to measure the fluorescence intensity (FI) of samples using 550 nm and 650 nm for the excitation and emission wavelengths, respectively, over 24 hours.
DOI: 10.25405/data.ncl.21896652.v1
title: Maillard reaction - Fluorescence results

description: The Maillard reaction can be monitored by measuring the amount of reactive primary amines. The amount of reactive free amino groups in heat-treated chitosan was measured using genipin crosslinking and fluorescence. A UV-VIS spectrophotometer (BMG LABTECH, FLUOstar Omega Microplate Reader) was used to measure the fluorescence intensity (FI) of samples using 550 nm and 650 nm for the excitation and emission wavelengths, respectively, over 24 hours.
DOI: 10.25405/data.ncl.21896646
title: Maillard reaction - OD at 420 nm

description: The browning intensity caused by pigment formation in the final stage of the Maillard reaction was measured spectrophotometrically at 420 nm.
DOI: 10.25405/data.ncl.21896634
title: Lysozyme degradation results

description: The lysozyme degradation of chitosan-genipin hydrogel disks was investigated gravimetrically in lysozyme/PBS solution containing 2 mg/ml lysozyme.
DOI: 10.25405/data.ncl.21896628
title: FTIR results

description: An Agilent Technologies Cary 630 FTIR spectrometer equipped with diamond attenuated total reflection (ATR) was used to obtain FTIR spectra for samples between 4000-650 cm-1 in transmittance mode. 32 background scans were taken before 64 sample scans.
DOI: 10.25405/data.ncl.21889068
title: DSC results

description: DSC was performed using a DSC Q20 (TA instrument) equipped with Universal Analysis 2000 software. Approximately 5 mg of chitosan powder was weighed and sealed in aluminium pans using a Tzero Sample Press Kit. An empty pan was used as reference. The samples were subjected to two heating/cooling cycles and a final heat ramp. In the first cycle for chitosan powder and hydrogels, the samples were heated from -50°C to 200°C and cooled to -50°C. In the second cycle, the samples were heated from -50°C to 500°C and immediately cooled down to -50°C. The final cycle consisted of a single heat ramp from -50°C to 500°C. All temperature ramps had a heating/cooling rate of 10°C/min under constant purging of dry nitrogen at 50 ml/min.
DOI: 10.25405/data.ncl.22093193
title: moDC co-culture with NaOH chitosan-genipin hydrogels

description: Viability of moDCs cultured without LPS, with 100 ng/ml LPS or with hydrogels made from NaOH-treated chitosan and genipin for 24 hours. <br> Median Fluorescence Intensity of the maturation markers CD83<strong>,</strong> CD86 and PD-L1 of moDCs cultured without LPS, with 100 ng/ml LPS or with hydrogels. <br> TNF-α production of moDCs cultured without LPS, with 100 ng/ml LPS or with hydrogels. <br> N=4. <br>
DOI: 10.25405/data.ncl.22093193.v1
title: moDC co-culture with NaOH chitosan-genipin hydrogels

description: Viability of moDCs cultured without LPS, with 100 ng/ml LPS or with hydrogels made from NaOH-treated chitosan and genipin for 24 hours. <br> Median Fluorescence Intensity of the maturation markers CD83<strong>,</strong> CD86 and PD-L1 of moDCs cultured without LPS, with 100 ng/ml LPS or with hydrogels. <br> TNF-α production of moDCs cultured without LPS, with 100 ng/ml LPS or with hydrogels. <br> N=4. <br>
DOI: 10.25405/data.ncl.22093190
title: TNF-alpha bioassay

description: TNF-α production by PBMCs from 3 donors cultured on films synthesised from 3 batches of each optimal treatment type (180°C for 1.5h or NaOH for 2h) versus native chitosan for 24 hours. Symbols are grouped based on the batch of chitosan films made. PBMCs were cultured alone with or without 100 ng/ml LPS as a positive or negative control, respectively. TNF-α values were analysed for statistical significance using a general linear model separating batch, donor and treatment effects. There were significant differences between treatment groups and multiple comparisons were performed to compare groups using Tukey's correction for multiple pairwise tests. N=9.
DOI: 10.25405/data.ncl.22093190.v1
title: TNF-alpha bioassay

description: TNF-α production by PBMCs from 3 donors cultured on films synthesised from 3 batches of each optimal treatment type (180°C for 1.5h or NaOH for 2h) versus native chitosan for 24 hours. Symbols are grouped based on the batch of chitosan films made. PBMCs were cultured alone with or without 100 ng/ml LPS as a positive or negative control, respectively. TNF-α values were analysed for statistical significance using a general linear model separating batch, donor and treatment effects. There were significant differences between treatment groups and multiple comparisons were performed to compare groups using Tukey's correction for multiple pairwise tests. N=9.
DOI: 10.25405/data.ncl.22093184
title: LAL assay of NaOH- and heat-treated chitosan

description: Endotoxin quantification of chitosan samples treated at 180°C or with NaOH,determined by the LAL assay. N=3.
DOI: 10.25405/data.ncl.22093181
title: CLI-095 experiment

description: TNF-α production of PBMCs cultured on native chitosan films or with 100 ng/ml LPS, with or without the TLR4 small molecule inhibitor, CLI-095, for 18 hours. N=3.
DOI: 10.25405/data.ncl.22093181.v1
title: CLI-095 experiment

description: TNF-α production of PBMCs cultured on native chitosan films or with 100 ng/ml LPS, with or without the TLR4 small molecule inhibitor, CLI-095, for 18 hours. N=3.
DOI: 10.25405/data.ncl.22093154
title: Native chitosan LAL assay

description: Endotoxin quantification of native chitosan powder suspended in endotoxin free water determined by LAL assay. N=3
DOI: 10.25405/data.ncl.22047596
title: WISDM HAR dataset

description: This dataset includes examples of real and generated HAR sensory data.
DOI: 10.25405/data.ncl.22047596.v1
title: WISDM HAR dataset

description: This dataset includes examples of real and generated HAR sensory data.
DOI: 10.6084/m9.figshare.20134481.v9
title: The effect of zooplankton on the distributions of dimethyl sulfide and dimethylsulfoniopropionate in the Bohai and Yellow Seas

description: We aim to study the effect of zooplankton on the distributions of dimethyl sulfide and dimethylsulfoniopropionate in the Bohai and Yellow Seas. Horizontal and vertical distributions of DMSP, DMSP lyase activity, DMS, and the abundances of bacteria, DMSP-consuming bacteria (DCB), DMSO-consuming bacteria and picophytoplankton in the Bohai Sea (BS) and Yellow Sea (YS) were investigated in autumn 2020. Bacterial community composition was conducted in February of 2021.
DOI: 10.5281/zenodo.7662802
title: Sediment exchange between southern Yellow Sea and Yangtze River Estuary in response to storm events

description: Sediment exchange pattern between Yangtze River Estuary and southern Yellow Sea has been a crucial and controversial scientific question, which limits our understanding on the future prediction of morphological evolution of the radical sand ridges and Jiangsu tidal flats. This study investigates various processes including tides, winds and waves to identify a dominant factor controlling sediment exchange between the southern Yellow Sea and the Yangtze River Estuary under storm conditions using a validated numerical model. Our results show that tide is the dominant force controlling hydrodynamics and sediment transport between the two systems. Tide controlled residual currents and sediment fluxes are towards northwest from the Yangtze River Estuary to the southern Yellow Sea, while wind and wave-induced currents under normal wind condition (Beaufort 3 scale, 3.4m s<sup>-1</sup>) adjust net sediment flux by less than 10% and 40%, respectively. The influences of winds and waves on sediment transport vary with wind directions. South or southeast winds enhance the tide-induced northwestward sediment transport, while north or northeast winds reduce the northwestward sediment transport. Under strong winter storm condition, however, the associated northern winds and waves become more important than tides in sediment transport, leading to southeastern directed residual currents and net sediment fluxes. Sediment transport is more active in nearshore area than offshore areas, with little vertical variations.
DOI: 10.5281/zenodo.7662801
title: Sediment exchange between southern Yellow Sea and Yangtze River Estuary in response to storm events

description: Sediment exchange pattern between Yangtze River Estuary and southern Yellow Sea has been a crucial and controversial scientific question, which limits our understanding on the future prediction of morphological evolution of the radical sand ridges and Jiangsu tidal flats. This study investigates various processes including tides, winds and waves to identify a dominant factor controlling sediment exchange between the southern Yellow Sea and the Yangtze River Estuary under storm conditions using a validated numerical model. Our results show that tide is the dominant force controlling hydrodynamics and sediment transport between the two systems. Tide controlled residual currents and sediment fluxes are towards northwest from the Yangtze River Estuary to the southern Yellow Sea, while wind and wave-induced currents under normal wind condition (Beaufort 3 scale, 3.4m s<sup>-1</sup>) adjust net sediment flux by less than 10% and 40%, respectively. The influences of winds and waves on sediment transport vary with wind directions. South or southeast winds enhance the tide-induced northwestward sediment transport, while north or northeast winds reduce the northwestward sediment transport. Under strong winter storm condition, however, the associated northern winds and waves become more important than tides in sediment transport, leading to southeastern directed residual currents and net sediment fluxes. Sediment transport is more active in nearshore area than offshore areas, with little vertical variations.
DOI: 10.6084/m9.figshare.22144700
title: Dung beetles and pH

description: Data used for the interaction between dung beetle (Onthophagus binodis) and cattle dung pH.
DOI: 10.6084/m9.figshare.19955621
title: Time sorting pitfall trap

description: Data for the TSPT methodology experiment including the diel activity of several introduced dung beetle species from Premer, NSW and Armidale, NSW from 2020-2022.
DOI: 10.34740/kaggle/dsv/5046923
title: OntoUML/UFO Catalog
DOI: 10.6084/m9.figshare.22144694
title: Assembly and annotation files of Protosalanx chinensis genome

description: <strong>Organism name:</strong>Protosalanx chinensis <strong>Submitter:</strong> Freshwater Fisheries Research Center, Chinese Academy of Fishery Sciences <strong>Date:</strong> 2023-02-23 <strong>Assembly level:</strong> Chromosome <strong>Assembly method:</strong> Hifiasm v0.16.1-r375 <strong>Genome coverage:</strong> 62x <strong>Sequencing technology:</strong> PacBio HiFi, DNBSEQ
DOI: 10.6084/m9.figshare.22144841.v1
title: Unbiased per capita GDP and ranking

description: This is the dataset for 2021 world biased/unbiased per capita GDP including ranking. The original data (country, code, population, GDP) was downloaded from the World Bank with date 12/22/2022.
DOI: 10.6084/m9.figshare.22144832.v1
title: Unbiased per capita GNI with ranking and classification

description: This is the dataset for 2021 world biased/unbiased per capita GNI including ranking and classification by the World Bank. The original data (country, code, population, GNI, classification) was downloaded from the World Bank with date 12/22/2022 (notice that some countries have no data at the time of download).
DOI: 10.6084/m9.figshare.21393780
title: Genome assembly and annotation files of Pedicularis kansuensis

description: Genome assembly, annotation and CDS files of <em>Pedicularis kansuensis </em>
DOI: 10.6084/m9.figshare.20499747
title: Table S1-S5 (Yaling Tao).xlsx

description: This dataset belongs to the manuscript entitled "<em>Middle-Late Cenozoic stepwise deformation propagation in eastern Tibet</em>" by Tao Yaling
DOI: 10.5517/ccdc.csd.cc2dbz4w
title: CCDC 2215078: Experimental Crystal Structure Determination

description: Related Article: Liankun Ai, Xin Xie, Baolin Li, Ying Wang|2023|Dyes Pigm.|213|111153|doi:10.1016/j.dyepig.2023.111153
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dbz5x
title: CCDC 2215079: Experimental Crystal Structure Determination

description: Related Article: Liankun Ai, Xin Xie, Baolin Li, Ying Wang|2023|Dyes Pigm.|213|111153|doi:10.1016/j.dyepig.2023.111153
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dbz6y
title: CCDC 2215080: Experimental Crystal Structure Determination

description: Related Article: Liankun Ai, Xin Xie, Baolin Li, Ying Wang|2023|Dyes Pigm.|213|111153|doi:10.1016/j.dyepig.2023.111153
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22086326
title: Parliament size and population (2021)

description: Original dataset The original dataset was downloaded from Inter-Parlimentary Union (IPU) on Oct 16 2021. <strong>Source: </strong>https://data.ipu.org/search <strong>Download</strong>: Select query (max 5 fields): Paliament name, Structure of parliament, Population (in thousands), Statutory number of members, Current number of members. Notice that we used the total number for bicameral structure. Pre-processing 1. <strong>Eritrea</strong>: No data. The archive data 150,150 is used. 2. <strong>Haiti:</strong> No data. The archive data 146,149 is used. 3. <strong>Sudan</strong>: No data. The archive data 480,482 is used. <br>
DOI: 10.6084/m9.figshare.22086326.v1
title: Parliament size and population

description: Original dataset The original dataset was downloaded from Inter-Parlimentary Union (IPU) on Oct 16 2021. <strong>Source: </strong>https://data.ipu.org/search <strong>Download</strong>: Select query (max 5 fields): Paliament name, Structure of parliament, Population (in thousands), Statutory number of members, Current number of members. Notice that we used the total number for bicameral structure. Pre-processing 1. <strong>Eritrea</strong>: No data. The archive data 150,150 is used. 2. <strong>Haiti:</strong> No data. The archive data 146,149 is used. 3. <strong>Sudan</strong>: No data. The archive data 480,482 is used. <br>
DOI: 10.6084/m9.figshare.22085060
title: Population and GDP/GNI/CO2 emissions (2019, raw data)

description: Original dataset The original year-2019 dataset was downloaded from the World Bank Databank by the following approach on July 23, 2022. <strong>Database:</strong> "World Development Indicators" <strong>Country:</strong> 266 (all available) <strong>Series:</strong> "CO2 emissions (kt)", "GDP (current US$)", "GNI, Atlas method (current US$)", and "Population, total" <strong>Time:</strong> 1960, 1970, 1980, 1990, 2000, 2010, 2017, 2018, 2019, 2020, 2021 <strong>Layout:</strong> Custom -&gt; Time: Column, Country: Row, Series: Column <strong>Download options:</strong> Excel Preprocessing <br> With libreoffice, remove non-country entries (lines after Zimbabwe), shorten column names for easy processing: Country Name -&gt; Country, Country Code -&gt; Code, "XXXX ... GNI ..." -&gt; GNI_1990, etc (notice '_', not '-', for R), remove unnesssary rows after line Zimbabwe.
DOI: 10.6084/m9.figshare.22085060.v5
title: Population and GDP/GNI/CO2 emissions

description: Original dataset The original year-2019 dataset was downloaded from the World Bank Databank by the following approach on July 23, 2022. <strong>Database:</strong> "World Development Indicators" <strong>Country:</strong> 266 (all available) <strong>Series:</strong> "CO2 emissions (kt)", "GDP (current US$)", "GNI, Atlas method (current US$)", and "Population, total" <strong>Time:</strong> 1960, 1970, 1980, 1990, 2000, 2010, 2017, 2018, 2019, 2020, 2021 <strong>Layout:</strong> Custom -&gt; Time: Column, Country: Row, Series: Column <strong>Download options:</strong> Excel Preprocessing <br> With libreoffice, remove non-country entries (lines after Zimbabwe), shorten column names for easy processing: Country Name -&gt; Country, Country Code -&gt; Code, "XXXX ... GNI ..." -&gt; GNI_1990, etc (notice '_', not '-', for R), remove unnesssary rows after line Zimbabwe.
DOI: 10.5066/p940j8ey
title: Ecological and Disease Data for Induced Immune Responses and Antibody Levels for Mycoplasma spp. in Captive and Wild Mojave Desert Tortoises (Gopherus agassizii)

description: This product consists of multiple tabular datasets and associated metadata for clinical status, gene transcripts, and lab results related to presence of Mycoplasma spp. in desert reptiles. To better understand immune responses to pathogenic infections, we conducted an experiment to quantify innate and induced immune responses using gene transcript profiles and measured induced antibody levels for Mycoplasma spp. in Mojave Desert tortoises (Gopherus agassizii). Data consists of: Clinical Status Data - Clinical status of presence or absence of nasal discharge, eroded nares, or labored respiration in 15 captive tortoises classified as naive, exposed, or infected. Gene Transcript Data - Gene transcription values for 11 genes of interest for 14 adult captive male tortoises and 13 adult wild tortoises in Clark County, Nevada, USA. Laboratory Data - Disease laboratory results for qPCR and ELISA test for five control, five exposed, and five infected captive adult tortoises and 14 reference wild adult tortoises in Clark County, Nevada, USA. These data support the following publication: Drake, K.K., Aiello, C.M., Bowen, L., Lewison, R.L., Esque, T.C., Nussear, K.E., Waters, S.C., and Hudson, P.J., 2019. Complex immune responses and molecular reactions to pathogens and disease in a desert reptile (Gopherus agassizii). Ecology and Evolution, 9(5), 2516-2534. https://doi.org/10.1002/ece3.4897.
DOI: 10.6084/m9.figshare.21995213.v4
title: Files for Main Figure 5

description: Files for generating main figure 5 1. intergenic_TE_gene_5kb: Correlation results between intergenic TEs and +/- 5kb genes 2. TCGA_COAD_four_endpoint_survival: Survival data in four endpoints for TCGA-COAD patients 3: TCGA_COAD_gene: Gene TPM expression for TCGA-COAD patients 4: trinucleotide_mutational_profile: Summary of mutational profile in trinucleotide context in TCGA-COAD patients 5. Sensing_gene_TE_cor_GSVA_lasTEq: Correlation results between DNA-RNA sensing genes and TE quantified by lasTEq 6. Sensing_gene_TE_cor_GSVA_telescope: Correlation results between DNA-RNA sensing genes and TE quantified by telescope 7. GSVA_TCGA_COAD_sensing_gene: GSVA scores calculated for DNA-RNA sensing genes 8. 3_UTR: locations of 3'UTR of genes 9. 5_UTR: locations of 5'UTR of genes 10: TCGA_COAD_TE_exp_lasTEq: TE TPM expression of full TCGA-COAD cohort using lasTEq
DOI: 10.25442/hku.22086263
title: Supporting data for "Developing Advanced Shape-morphing, Biomolecule-delivering and Cell-laden Tissue Engineering Scaffolds through 3D/4D Printing"

description: This is the research dataset submitted to support the PhD thesis entitled "Developing Advanced Shape-morphing, Biomolecule-delivering and Cell-laden Tissue Engineering Scaffolds through 3D/4D Printing". This research dataset includes a dataset zip file and a Readme file. The dataset zip file contains metadata, and the Readme txt file describes the used methodologies, technologies, and software.
DOI: 10.25442/hku.22086263.v1
title: Supporting data for "Developing Advanced Shape-morphing, Biomolecule-delivering and Cell-laden Tissue Engineering Scaffolds through 3D/4D Printing"

description: This is the research dataset submitted to support the PhD thesis entitled "Developing Advanced Shape-morphing, Biomolecule-delivering and Cell-laden Tissue Engineering Scaffolds through 3D/4D Printing". This research dataset includes a dataset zip file and a Readme file. The dataset zip file contains metadata, and the Readme txt file describes the used methodologies, technologies, and software.