cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/34w3cxwd9v.1
title: Discovery of Protein-Protein Interaction Inhibitors by Integrating Protein Engineering and Chemical Screening Platforms
DOI: 10.17632/hwf6mwdccj.1
title: Supplementary Appendix - Antecedent Immunosuppressive Therapy for Immune-Mediated Inflammatory Diseases in the Setting of a COVID-19 Outbreak

description: Supplemental figures and tables
DOI: 10.17632/js6yf9x2xs.2
title: El Cruz Azul y su afición

description: Cruz Azul is a Mexican soccer team based in Mexico City. It is one of the "big four": the most popular teams in Mexico. The objective of the study was to find out why respondents are fans of this particular team, and if fandom translates into attendance at the stadium. 1331 responses. According to numerous studies, sports fandom start arises from the need for distraction, evasion, and entertainment. Being a fan of a particular team is part of the human need to belong to a social group or community. According to Sarsted (2014), satisfaction of the sports fan is based on the characteristics of the team, the stadium and its peripheral services (food, beverages, parking, sound, etc.), the relationship established between the club and fans, through social media or promotions, and the characteristics of the club (its prestige, tradition, its farm system, etc.). Apparently, for Cruz Azul fans, going to the stadium meets the need for distraction and for feeling part of a community, but the tradition and history of the club are a more important part of that affiliation. For them, the current team and its performance are less important. On the other hand, the lowest score was obtained by the item The Azteca Stadium is ideal to watch the games. As the stadium and its peripheral services are an important component of fan satisfaction, this should raise a red flag for club administrators. In Spanish.
DOI: 10.17632/3vf7m4gtzb.2
title: Data for: 3659611

description: This dataset includes every reference to the 1787 United States Constitutional Convention in Supreme Court opinions through the 2019 term. Other variables such as citing justice, case name, year, and portion of the opinion quoting the Convention are included among many other variables.
DOI: 10.17632/sxpfkty7dw.1
title: Raw data related to DTX2-mediated ubiquitination of ADP-ribosylated substrates

description: Crosstalk between ubiquitination and ADP-ribosylation regulates spatio-temporal recruitment of key players during DNA damage repair (DDR). The Deltex family of ubiquitin ligases (DTX1–4 and DTX3L), are characterized by a RING domain followed by a C-terminal domain (DTC) of unknown function; four Deltex proteins have other domains or partner proteins for binding poly-ADP-ribose (PAR), suggesting a role for these proteins in mediating crosstalk between ubiquitination and ADP-ribosylation. Here, we use two label-free mass spectrometry techniques to identify substrates of human DTX2 and uncover a new ADP-ribose-binding domain that facilitates PAR-dependent ubiquitination.
DOI: 10.17632/87pvmycwfm.1
title: Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer

description: Matrix proteins are encoded by many enveloped viruses, including influenza viruses, herpes viruses and coronaviruses. Underneath the viral envelope of influenza virus, matrix protein 1 (M1) forms an oligomeric layer critical for particle stability and pH-dependent RNA genome release. However, high-resolution structures of full-length monomeric M1 and the matrix layer have not been available, impeding antiviral targeting and understanding of the pH-dependent transitions involved in cell entry. Here, purification and extensive mutagenesis revealed protein-protein interfaces required for the formation of multilayered helical M1 oligomers similar to those observed in virions exposed to the low pH of cell entry. However, single-layered helical oligomers with biochemical and ultrastructural similarity to those found in infectious virions before cell entry were observed upon mutation of a single amino acid. The highly ordered structure of the single-layered oligomers and their likeness to the matrix layer of intact virions prompted structural analysis by cryo-electron microscopy. The resulting 3.4 Å-resolution structure revealed the molecular details of M1 folding and its organization within the single-shelled matrix. The solution of the full-length M1 structure, the identification of critical assembly interfaces, and the development of M1 assembly assays with purified proteins are crucial advances for antiviral targeting of influenza viruses.
DOI: 10.17632/86th3xjggt.1
title: Reports of mislabelling in hakes detected from DNA
DOI: 10.17632/7rv77w2yj3.1
title: Metaphyton community and biochemical analysis of neurotoxic cyanobacterial mats in Lady Bird Lake, Austin, Texas (August 5, 2019)

description: For the first time in the history of Austin, Texas, a toxin-producing cyanobacterial bloom was documented on August 3, 2019 after several dog deaths were reported to City staff. These data represent the first samples taken on August 5, 2019. Individual cells/filaments of microalgae were isolated for genetic and biochemical characterization. Genetic identification was performed using 16S rRNA PCR barcoding and Sanger sequencing. Toxins were detected using LCMS. The following dataset contains the raw and processed data for the DNA sequencing and biochemical evaluations.
DOI: 10.17632/ypdtngcbsf.1
title: AKD in cirrhosis

description: Outpatients with cirrhosis and renal impairment
DOI: 10.17632/yjydjzww2j.2
title: Pineapple classification images and measured properties

description: Pineapple classification images and measured properties
DOI: 10.17632/bx72nv8fhn.1
title: HT-RUS of SB-CoNi-10+

description: Raw and groomed (room temp and high temp) RUS peaks data for the SB-CoNi-10+ specimen. Groomed data are supplied as a summary Excel file and raw RUS peaks data are supplied as .txt files with the following column header definitions: FQ = Average measured frequency recorded from the two transducers, units of kHz. AMPL = Sum measured amplitude recorded from the two transducers, arbitrary units, (% transducer 1, % transducer 2) D2 = Calculated 2nd derivative of amplitude as a function of frequency for the selected peak, arbitrary units, used for peak picking ZW = Calculated zero crossing width for the selected peak, arbitrary units, used for peak picking All frequencies listed in the groomed summary file have units of kHz, all dimensions have units of mm, mass has units of grams. See different tabs for the 5 RT spectra (averaged together), and the individual HT spectra for each temperature.
DOI: 10.17632/bx72nv8fhn.2
title: HT-RUS of SB-CoNi-10+

description: Raw and groomed (room temp and high temp) RUS peaks data for the SB-CoNi-10+ specimen. Groomed data are supplied as a summary Excel file and raw RUS peaks data are supplied as .txt files with the following column header definitions: FQ = Average measured frequency recorded from the two transducers, units of kHz. AMPL = Sum measured amplitude recorded from the two transducers, arbitrary units, (% transducer 1, % transducer 2) D2 = Calculated 2nd derivative of amplitude as a function of frequency for the selected peak, arbitrary units, used for peak picking ZW = Calculated zero crossing width for the selected peak, arbitrary units, used for peak picking All frequencies listed in the groomed summary file have units of kHz, all dimensions have units of mm, mass has units of grams. See different tabs for the 5 RT spectra (averaged together), and the individual HT spectra for each temperature.
DOI: 10.17632/bx72nv8fhn.3
title: HT-RUS of SB-CoNi-10+

description: Raw and groomed (room temp and high temp) RUS peaks data for the SB-CoNi-10+ specimen. Groomed data are supplied as a summary Excel file and raw RUS peaks data are supplied as .txt files with the following column header definitions: FQ = Average measured frequency recorded from the two transducers, units of kHz. AMPL = Sum measured amplitude recorded from the two transducers, arbitrary units, (% transducer 1, % transducer 2) D2 = Calculated 2nd derivative of amplitude as a function of frequency for the selected peak, arbitrary units, used for peak picking ZW = Calculated zero crossing width for the selected peak, arbitrary units, used for peak picking All frequencies listed in the groomed summary file have units of kHz, all dimensions have units of mm, mass has units of grams. See different tabs for the 5 RT spectra (averaged together), and the individual HT spectra for each temperature.
DOI: 10.17632/djxyt6bd6d.1
title: The impact of hybrid contact lenses on keratoconus progression after accelerated transepithelial crosslinking

description: SPSS Data
DOI: 10.17632/626g89jpg9.1
title: Crustal deformation in the northeastern Tibetan Plateau: the roles of northward indentation of the Qaidam basin and southward underthrusting of the North China Craton

description: Chuang Sun*, Zhigang Li, Wenjun Zheng, Dong Jia, Shuang Yang *Corresponding author: Chuang Sun (sunchuang@mail.sysu.edu.cn and sunny_like@163.com) All the presented kinematical data were measured from modelled thrust wedges in our sandbox experiments which illustrating how brittle upper crust response differently to distinct boundary conditions, like that of indentation or underthrusting of certain plate/block mantle lithosphere in the northern Tibetan Plateau. This supporting information includes the supplementary 5 tables. Table S1. The measured elevations of each structures in Exp.030 and Exp.031 and their uplift rates. Table S2. The measured elevations of each structures in Exp.026 and their uplift rates. Table S3. The measured elevations of each structures in Exp.020 and Exp.022 and their uplift rates. Table S4. Dynamic surface slope angles measured from all the five experiments. Table S5. Dynamic width of the growing thrust wedges measured from all the five experiments.
DOI: 10.17632/c5ptknsjvm.1
title: Nature Connectedness, Emotion Regulation, and Stress

description: The data were used in the study investigated the mediator role of cognitive emotion regulation strategies in the relationship between nature connectedness and stress.
DOI: 10.17632/4zvs6jwgdt.4
title: Partial melting of the lower oceanic crust: implications for tracing the slab component in the source of mid-ocean ridge basalts

description: 1. Six figures supplementary to this study; 2. Major and trace element composition data (14 tables) for this study; 3. ICP-SF-MS data quality file
DOI: 10.17632/6stgw8zyhy.1
title: A split-window method to retrieving sea surface temperature from landsat 8 thermal infrared remote sensing data in offshore waters

description: Supplementary data contains Landsat8 original data, NCEP atmospheric profile data, emissivity data, Landsat8 SST inversion results, and AVHRR SST data.
DOI: 10.17632/vmxkxmsbfh.2
title: Friction Properties of Hornblende at Hydrothermal Conditions

description: Friction Properties of Hornblende at Hydrothermal Conditions
DOI: 10.5281/zenodo.3701539
title: Data from: A comprehensive and cost-effective approach for investigating passive dispersal in minute invertebrates – a case study of the phytophagous wheat curl mite

description: <strong>Filename: </strong>1_wind_vector_tunnels.xlsx Variables: 1. variant - experimental approach: W- wind tunnel; V - vector tunnel <br> 2. rep_id - repetition number<br> 3. pop - population size on the source patch<br> 4. n_disp - number of individuals that left the source patch<br> 5. n_col - population size on the target patch after several generations <strong>Filename: </strong>2_departure_tunnel.xlsx Variables: 1. variant - host plant species: B - smooth brome (<em>Bromopsis inermis</em>); W - wheat (<em>Triticum aestivum</em>)<br> 2. rep_id - - repetition number<br> 3. n_beg - number of individuals at the beginning of the experimental session<br> 4. n_end - number of individuals at the end of the experimental session<br> 5. n_blown - number of individuals blown away
description: The study was funded by the National Science Centre (NSC) grant no. 2016/21/B/NZ8/00786, and supported by NSC PhD scholarship no. 2018/28/T/NZ8/00060 awarded to Agnieszka Majer and NSC PhD scholarship no. 2019/32/T/NZ8/00151 awarded to Alicja Laska. AL is a scholarship holder from the Adam Mickiewicz University Foundation awarded in 2019/2020
DOI: 10.17632/vhxdgjfjnk.3
title: Dataset of Tweets and News Media on COVID-19 in Portuguese

description: Collection of 3,925,366 tweets and 18,413 online news around the online discussion about COVID-19 in Brazil. The data from Twitter were collected through Twitterscraper Python library and we considered a set of keywords in Portuguese regarding to COVID-19. In order to facilitate the identification of tweets that have hashtags, media and retweets for researchers or data enthusiasts, we created three specific datasets for each of these categories. The news on COVID-19 was collected from the UOL portal, the most popular Brazilian website. All the data were gathered from January to May, 2020. These dataset can attract the attention from communities such as data science, social science, natural language processing, tourism, infodemiology, and public health.
DOI: 10.17632/nswtwm7j8k.1
title: Data set on attitude, religious perspective, and practice among Indonesian residents towards COVID-19

description: This is the survey evaluating attitude, religious perspective, and practice among Indonesian residents toward COVID-19. The data were collected via an online questionnaire, including demographic information (7 items), attitude and practice (5 items), and religious perspective and practice (5 items), from July 11 – 18, 2020, collecting a total of 1,345 respondents.
DOI: 10.17632/2sv3287gk3.3
title: cfDNA supplementary table 4~11

description: supplementary table 4~11 of "Genome-scale profiling of circulating cell-free DNA signatures for early detection of hepatocellular carcinoma in cirrhotic patients"
DOI: 10.17632/63t5c7xb4c.1
title: SARS-CoV-2 GISAID isolates (2020-06-17) genotyping VCF

description: VCF file containing filtered mutated sites in SARS-CoV-2 genomes obtained from GISAID EpiCoV, separated by individual mutations. The columns correspond to viral genome accession ID, nucleotide position in the genome, mutation ID (left blank in all rows), reference nucleotide, identified mutation, quality, filter, and information columns (all left blank), format (GT in all rows), column corresponding to reference genome (all 0, referring to reference nucleotide column), and columns corresponding to isolate genomes, with each row identifying the nucleotide in the POS column, and whether it is non-mutant (0), or the mutant indicated in the identified mutation column (1). The file is tab delimited, with 22546 rows including the names, and 30690 columns. The file was generated to test the hypothesis whether the five most common mutations in the SARS-CoV-2 genome replication complex proteins, nsps 7, 8, 12, and 14, significantly affect the mutation density of the virus over time and whether these affect the synonymous and nonsynonymous mutation densities differently. We discovered that mutations in nsp14, an exonuclease with error correcting capabilities, are most likely to be correlated with increased mutational load across the genome compared to wildtype SARS-CoV-2. These results were obtained by identifying the frequency of mutations across all isolates in genomic regions of interest, analyzing which of the twenty mutations (five per nsp) have a statistically meaningful relationship with the mutation density in the M and E genes (chosen due to being under little selective pressure), and identifying the synonymous and nonsynonymous genomic SNV density for isolates with any of the statistically meaningful mutations, as well as isolates with none of the identified mutations.
DOI: 10.17632/gwhbbtkpx6.2
title: Characterization of retinal autofluorescent lesions in a mouse model of juvenile neuronal ceroid lipofuscinosis (CLN3 disease)

description: This dataset contains the raw image files for the figures presented in the Data in Brief article "Imaging data on characterization of retinal autofluorescent lesions in a mouse model of juvenile neuronal ceroid lipofuscinosis (CLN3 disease)". Please refer to the article for description (https://doi.org/10.1016/j.dib.2020.106076).
DOI: 10.17632/y8s7xw872z.1
title: Public webinars

description: A place to put the data used in the presentation of different webinars on geology and geostatistics for Universities and Associations.
DOI: 10.5517/ccdc.csd.cc23qtvj
title: CCDC 1958358: Experimental Crystal Structure Determination

description: Related Article: Kyounghoon Lee, Johnathan D. Culpepper, Riffat Parveen, Dale C. Swenson, Bess Vlaisavljevich, Scott R. Daly|2020|Organometallics|39|2526|doi:10.1021/acs.organomet.0c00321
DOI: 10.5517/ccdc.csd.cc23qtwk
title: CCDC 1958359: Experimental Crystal Structure Determination

description: Related Article: Kyounghoon Lee, Johnathan D. Culpepper, Riffat Parveen, Dale C. Swenson, Bess Vlaisavljevich, Scott R. Daly|2020|Organometallics|39|2526|doi:10.1021/acs.organomet.0c00321
DOI: 10.5517/ccdc.csd.cc23qtxl
title: CCDC 1958360: Experimental Crystal Structure Determination

description: Related Article: Kyounghoon Lee, Johnathan D. Culpepper, Riffat Parveen, Dale C. Swenson, Bess Vlaisavljevich, Scott R. Daly|2020|Organometallics|39|2526|doi:10.1021/acs.organomet.0c00321
DOI: 10.5517/ccdc.csd.cc23qtym
title: CCDC 1958361: Experimental Crystal Structure Determination

description: Related Article: Kyounghoon Lee, Johnathan D. Culpepper, Riffat Parveen, Dale C. Swenson, Bess Vlaisavljevich, Scott R. Daly|2020|Organometallics|39|2526|doi:10.1021/acs.organomet.0c00321
DOI: 10.5517/ccdc.csd.cc23qtzn
title: CCDC 1958362: Experimental Crystal Structure Determination

description: Related Article: Kyounghoon Lee, Johnathan D. Culpepper, Riffat Parveen, Dale C. Swenson, Bess Vlaisavljevich, Scott R. Daly|2020|Organometallics|39|2526|doi:10.1021/acs.organomet.0c00321
DOI: 10.17632/pr3879pfsx.1
title: Supplementary Table 1: Mean Change in Actinic Keratosis Counts

description: Mean Change in Actinic Keratosis Counts 101-200 Days and 201-300 Days of Treatment
DOI: 10.17632/78r6yfbmkk.1
title: Survey data on government risk communication and citizen compliance during the COVID-19 pandemic in Vietnam

description: The data was collected from 467 respondent using an online survey. The survey was conducted from March 31 to April 3, 2020. The dataset includes five major groups of information: (1) socio-economic characteristics of the respondents; (2) the respondents’ self-report on the government risk communications via various information and communication channels; (3) the respondents’ understanding of COVID-19; (4) the respondents’ perception on risks from COVID-19; and (5) the respondents’ compliance with the public health safety measures during the pandemic.
DOI: 10.17632/jw9tpd3ggg.1
title: Sensitivity-Analysis-Data

description: The data used for the journal paper submitted to the Journal of Geophysical Research: Oceans. This data can be used under the GNU license. The data are divided as follows: 1) The hurricane parameters (central pressure (mbar), radius of maximum wind (nm) and hurricane's forward velocity (km/hr)) data, 2) The peak storm surge height in meters (maxele) at the shoreline for the Mont Carlo (MC) and Polynomial Chaos Exapnsion (PCE) data sets, 3) The peak storm surge height in meters (maxele) at the shoreline for MC and PCE data sets, and 4) The maximum current speed in m/sec (maxvel) just before the shoreline for MC and PCE data sets. In order to use this data, please cite the paper
DOI: 10.17632/cfm526zthx.1
title: Capacity-limited resources are used for managing sensory degradation and cognitive demands: Implications for age-related cognitive decline and dementia

description: Older adults with sensory deficits are at higher risk for developing cognitive impairment and dementia. It remains uncertain if the link between sensory and cognitive functioning reflects a common underlying factor or whether sensory deficits directly undermine cognitive processing. This issue was addressed by comparing behavioral and event-related potential responses (ERPs) of 16 older and 16 young adults during a working memory paradigm that parametrically varied visual contrast level (100%, 69%, 22%) and cognitive task load (1-4 face pairs to remember). Participants' ERPs were recorded via 128-electrode EEG. The groups were well-matched on demographic and neuropsychological variables; however, older adults had worse corrected visual acuity and contrast sensitivity. The study’s major finding was an interaction between visual contrast level and task load on performance accuracy (percent of correct responses) and the allocation of resources for decision making/updating (as indexed by the P3b amplitude). The negative impact of degraded visual processing was greater at higher levels of task demand. This result suggests that a shared pool of processing resources is used to mediate cognitive operations and manage the processing of degraded images. The study also demonstrated that older adults reach the limits of their processing capacity at lower levels of task load. The interaction between visual degradation and task demand, accompanied by the age-related reduction in available processing resources highlight the increased vulnerability of older adults. Specifically, an age-associated decline in visual acuity and contrast sensitivity puts older adults at risk for depleting their limited resources in the service of processing degraded visual images. The results of this study underscore the potential importance of optimizing vision in older adults to help mitigate age-associated cognitive decline.
DOI: 10.17632/rhjb4vtf2g.1
title: Data for: Tidying up the cluttered understorey: Foraging strategy mediates bat activity responses to invasive rhododendron

description: Since its introduction in the 1700s, the non-native evergreen shrub Rhododendron ponticum has become ubiquitous across the UK but is currently widely removed due to its negative environmental impacts. By altering habitat structure in woodland understorey, the presence of rhododendron could also influence bat activity. However, any such impacts on bats will likely depend on the morphology, foraging strategy and preferred habitat of each bat species. To investigate the effects of rhododendron invasion on British bat species, we used passive acoustic monitoring to survey bat activity at twelve sites across Richmond Park in London, where rhododendron was either present, absent or had recently been removed. As predicted, our results indicated a significant reduction in the activity of larger, open space foragers (Nyctalus noctula, Eptesicus serotinus and Nyctalus leisleri) in rhododendron-invaded areas. However, when investigating other microhabitat characteristics, we found that the presence of deer had a stronger negative effect on these species than higher densities of woody understory. The activity of closed- and edge-space foraging bat species (e.g. Myotis spp. and Pipistrellus spp.) was not negatively affected by rhododendron and a greater degree of woody understorey had a strong positive effect on the activity of P. pygmaeus. Assessments of commuting/roosting activity also demonstrated more frequent use of sites without rhododendron for N. noctula, E. serotinus, N. leisleri and P. pipistrellus. Article data: This folder contains data files associated with the published article and appendices. Files contain the following data for each of the twelve sites: BatClassify results, BatClassify validation checks, BatClassify validation statistics, Plecotus auritus validation, additional Kaleidoscope Pro results (Nyctalus noctula, Eptesicus serotinus and Nyctalus leisleri) and, where appropriate, dates checked for errors due to battery noise. Compiled validation statistics are also provided in a separate spreadsheet.