cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7869709
title: Multisource product distribution dataset

description: This dataset is generated for testing and comparing algorithms used for product distribution from production centers to demand centers with a possibility of non-connectivity constraints. These datasets are put together for this purpose. In the datasets x refers to the production centers and X for the demand centers.
DOI: 10.5281/zenodo.7869710
title: Multisource product distribution dataset

description: This dataset is generated for testing and comparing algorithms used for product distribution from production centers to demand centers with a possibility of non-connectivity constraints. These datasets are put together for this purpose. In the datasets x refers to the production centers and X for the demand centers.
DOI: 10.6084/m9.figshare.13120806
title: Additional file 1 of Hypoxia-autophagy axis induces VEGFA by peritoneal mesothelial cells to promote gastric cancer peritoneal metastasis through an integrin α5-fibronectin pathway

description: Additional file 1.
DOI: 10.6084/m9.figshare.23606761.v1
title: Additional file 9 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S2. The identified proteins by mass spectrometry
DOI: 10.6084/m9.figshare.23606752.v1
title: Additional file 6 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S1. The loading efficiency of DHA on ZIF NPs
DOI: 10.6084/m9.figshare.23606752
title: Additional file 6 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S1. The loading efficiency of DHA on ZIF NPs
DOI: 10.6084/m9.figshare.23606764.v1
title: Additional file 10 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S3. The differentially expressed proteins in ZIF-DHA-treated A2780 cells
DOI: 10.6084/m9.figshare.23606759.v1
title: Additional file 7 of Discovery of extracellular vesicle-delivered miR-185-5p in the plasma of patients as an indicator for advanced adenoma and colorectal cancer

description: Additional file 7. Table S1. The clinical and pathologic characteristics of the patients.
DOI: 10.6084/m9.figshare.23606759
title: Additional file 7 of Discovery of extracellular vesicle-delivered miR-185-5p in the plasma of patients as an indicator for advanced adenoma and colorectal cancer

description: Additional file 7. Table S1. The clinical and pathologic characteristics of the patients.
DOI: 10.6084/m9.figshare.23606761
title: Additional file 9 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S2. The identified proteins by mass spectrometry
DOI: 10.6084/m9.figshare.23606767
title: Additional file 11 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S4. The differentially expressed proteins in ZIF-DHA-treated SKOV3 cells
DOI: 10.6084/m9.figshare.23606767.v1
title: Additional file 11 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S4. The differentially expressed proteins in ZIF-DHA-treated SKOV3 cells
DOI: 10.6084/m9.figshare.23606762.v1
title: Additional file 8 of Discovery of extracellular vesicle-delivered miR-185-5p in the plasma of patients as an indicator for advanced adenoma and colorectal cancer

description: Additional file 8. Table S2. 10 candidate miRNAs that were upregulated or downregulated in both AA vs. HD and CRC vs. AA groups.
DOI: 10.6084/m9.figshare.13120918.v1
title: Additional file 5 of Methylome and transcriptome profiles in three yak tissues revealed that DNA methylation and the transcription factor ZGPAT co-regulate milk production

description: Additional file 5 Supplymentary Table 5. WGCNA analysis of age-related genes.
DOI: 10.6084/m9.figshare.13120921.v1
title: Additional file 6 of Methylome and transcriptome profiles in three yak tissues revealed that DNA methylation and the transcription factor ZGPAT co-regulate milk production

description: Additional file 6 Supplymentary Table 6. WGCNA analysis of tissue-related genes.
DOI: 10.6084/m9.figshare.12072312
title: Additional file 3 of The landscape of alternative splicing in HIV-1 infected CD4 T-cells

description: Additional file 3: Table S2. List of AS genes in the enriched canonical pathways.
DOI: 10.6084/m9.figshare.12072330.v1
title: Additional file 2 of Pseudogene-gene functional networks are prognostic of patient survival in breast cancer

description: Additional file 2. This file contains the p-values for univariate cox proportional hazard models on each of the genes from our model in the Swedish cohort. The test was performed on multiple subsets of patients including age and breast cancer subtype using median expression as the cutoff.
DOI: 10.6084/m9.figshare.23606764
title: Additional file 10 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S3. The differentially expressed proteins in ZIF-DHA-treated A2780 cells
DOI: 10.6084/m9.figshare.23606770
title: Additional file 12 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S5. The co-differentially expressed proteins in ZIF-DHA-treated cells
DOI: 10.6084/m9.figshare.23606770.v1
title: Additional file 12 of Metal-organic framework-encapsulated dihydroartemisinin nanoparticles induces apoptotic cell death in ovarian cancer by blocking ROMO1-mediated ROS production

description: Table S5. The co-differentially expressed proteins in ZIF-DHA-treated cells
DOI: 10.6084/m9.figshare.12072366
title: Additional file 1 of A pan-cancer study of class-3 semaphorins as therapeutic targets in cancer

description: Additional file 1: This is an MS Excel file containing the compiled TCGA data used for this study.
DOI: 10.6084/m9.figshare.12072375.v1
title: Additional file 2 of A pan-cancer study of class-3 semaphorins as therapeutic targets in cancer

description: Additional file 2: This is an MS Excel file containing the SEMA3 gene expression and drug sensitivity score derived from NCI60 cell line study.
DOI: 10.6084/m9.figshare.23606762
title: Additional file 8 of Discovery of extracellular vesicle-delivered miR-185-5p in the plasma of patients as an indicator for advanced adenoma and colorectal cancer

description: Additional file 8. Table S2. 10 candidate miRNAs that were upregulated or downregulated in both AA vs. HD and CRC vs. AA groups.
DOI: 10.6084/m9.figshare.12072570
title: Additional file 2 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics

description: Additional file 2: Table S1. Sampling locations and metagenomes information.
DOI: 10.6084/m9.figshare.9975425.v2
title: RETRACTED ARTICLE: The circular RNA ZNF292 alleviates OGD-induced injury in H9c2 cells via targeting BNIP3

description: We, the Editors and Publisher of the journal <i>Cell Cycle</i>, have retracted the following article: Qi Ren, Hu Li and Xiaowen Wang. The circular RNA ZNF292 alleviates OGD-induced injury in H9c2 cells via targeting BNIP3. Cell Cycle. 2019;18(23):3365-3377. doi: 10.1080/15384101.2019.1676585 Since publication, the authors have raised significant concerns about the reliability of the data presented in the article. As the Editor and Publisher also have concerns about the integrity of the reported results, all parties have agreed to retract the article to ensure correction of the scholarly record. We have been informed in our decision-making by our policy on publishing ethics and integrity and the COPE guidelines on retractions. The retracted article will remain online to maintain the scholarly record, but it will be digitally watermarked on each page as ‘Retracted’.
DOI: 10.6084/m9.figshare.14691760
title: Additional file 2 of Genome-wide identification of the DUF668 gene family in cotton and expression profiling analysis of GhDUF668 in Gossypium hirsutum under adverse stress

description: Additional file 2: Table S1. Information on the DUF668 gene family in G. barbadense, G. arboreum and G. raimondii.
DOI: 10.6084/m9.figshare.12072567
title: Additional file 5 of A novel protein encoded by circFNDC3B inhibits tumor progression and EMT through regulating Snail in colon cancer

description: Additional file 5. DEGs were screened.
DOI: 10.25345/c53t9dh95
title: MassIVE MSV000094010 - Molecular and Cellular Mechanisms of Teneurin Signaling in Synaptic Partner Matching
title: In the developing brain, axons exhibit remarkable precision in selecting synaptic partners among many non-partner cells. Teneurins are evolutionarily conserved transmembrane proteins that instruct synaptic partner matching via matched expression and homophilic attraction between synaptic partners. Little is known how intracellular signaling pathways execute this and diverse other functions triggered by extracellular interactions of teneurins. Here, we use in situ proximity labeling to identify Ten-ms intracellular interactome in the Drosophila brain. Genetic interaction using quantitative partner matching assays in both olfactory receptor neurons (ORNs) and projection neurons (PNs) suggest a common pathway Ten-m binds to and negatively regulates a RhoGAP, thus activating the Rac1 small GTPases to promote synaptic partner matching. Developmental analyses with single-axon resolution further reveal that ORN axons initially extend exuberant branches along their trajectory, and those that contact partner PN dendrites are selectively stabilized, accompanied by an increase of local F-actin accumulation.
DOI: 10.6084/m9.figshare.12072567.v1
title: Additional file 5 of A novel protein encoded by circFNDC3B inhibits tumor progression and EMT through regulating Snail in colon cancer

description: Additional file 5. DEGs were screened.
DOI: 10.6084/m9.figshare.23606779
title: Additional file 1 of Multiomics data analyses to identify SLC25A17 as a novel biomarker to predict the prognosis and immune microenvironment in head and neck squamous cell carcinoma

description: Additional file 1. The clinicopathlogical characteristics of TCGA-HNSC cohort.
DOI: 10.6084/m9.figshare.12072582
title: Additional file 5 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics

description: Additional file 5: Table S4. Full list of genera and their abundance in the polar seawater.
DOI: 10.6084/m9.figshare.12072585.v1
title: Additional file 6 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics

description: Additional file 6: Table S5. Information of the MAGs extracted from polar seawater metagenomes.
DOI: 10.6084/m9.figshare.12072573
title: Additional file 3 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics

description: Additional file 3: Table S2. Information of the assembled contigs.
DOI: 10.6084/m9.figshare.12072579
title: Additional file 4 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics

description: Additional file 4: Table S3. Full phyla (class for Proteobacteria) list and their abundance in the polar seawater.
DOI: 10.6084/m9.figshare.14167744
title: Additional file 1 of Comparative analysis of drought-responsive and -adaptive genes in Chinese wingnut (Pterocarya stenoptera C. DC)

description: Additional file 1. The supporting data for this manuscript. Table S1. Summary of sequence data from nine samples. Table S2. The GO and KEGG enrichment for up- and down- regulated DEGs at the early stage (3 h) with FC ≥ 2. Table S3. The GO and KEGG enrichment for up- and down- regulated DEGs at the late stage (12 h) with FC ≥ 2. Table S4. The primers of qRT-PCR and gene function for 8 selected genes. (XLS 44 kb)
DOI: 10.15156/bio/sh064737.07fu
title: SH064737.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh064738.07fu
title: SH064738.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh064739.07fu
title: SH064739.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh064740.07fu
title: SH064740.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh064741.07fu
title: SH064741.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh064742.07fu
title: SH064742.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh064743.07fu
title: SH064743.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh064744.07fu
title: SH064744.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh064745.07fu
title: SH064745.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh064746.07fu
title: SH064746.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.