cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.n7f3bw
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stachytarpheta jamaicensis",
 "Country is Dominica",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041841-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9e3qmk
title: Occurrence Download

description: A dataset containing 162037 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calamagrostis canescens"
 ]
}

 The dataset includes 162037 records from 463 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041768-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28642406.v14
title: Matbench Discovery - Model Predictions for Geometry Optimization

description: This dataset contains model predictions from various models evaluated on the
 Matbench Discovery benchmark for the geometry optimization task.

 Task description: Relaxing atomic positions to minimize the energy

 For more information about the benchmark and models, visit:
 https://github.com/janosh/matbench-discovery.
DOI: 10.18150/ybmw3v
title: Merging TWS time series estimated from GRACE-FO data

description: The files contain metadata for the article: Lenczuk, A., Klos, A., & Bogusz, J. (2023). Merging the gravity fields of the GRACE Follow-On Science Data System project using different weighting approaches. Advances in Geodesy and Geoinformation, 72(2), e42. DOI: 10.24425/agg.2023.144594.We have included values of linear trend and annual amplitude of TWS estimated for original Gravity Recovery and Climate Experiment Follow-On (GRACE-FO) and weighted GRACE-FO provided in form of spherical harmonic coefficients. We have also included time series of weighted TWS for three different weighting approaches estimated for Amazon, Murray-Durling, Loire and Zambezi river basins.This is the result of the National Science Center (NCN) project, Poland, grant number UMO-2021/41/N/ ST10/01472.W plikach znajdują się metadane do artykułu: Lenczuk, A., Klos, A., & Bogusz, J. (2023). Merging the gravity fields of the GRACE Follow-On Science Data System project using different weighting approaches. Advances in Geodesy and Geoinformation, 72(2), e42. DOI: 10.24425/agg.2023.144594.W plikach uwzględniliśmy wartości trendu liniowego i amplitudy oscylacji rocznej dla zmian TWS oszacowanych dla oryginalnych danych GRACE-FO (ang. Gravity Recovery and Climate Experiment Follow-On) oraz wagowanego GRACE-FO udostępnianych w postaci współczynników harmonik sferycznych. Uwzględniliśmy również szeregi czasowe wagowanego TWS dla trzech różnych metod wyznaczania wag oszacowanych dla dorzeczy rzek Amazonki, Murray-Durling, Loary i Zambezi. Dane są wynikiem realizacji projektu Narodowego Centrum Nauki (NCN), grant nr UMO-2021/41/N/ ST10/01472.
DOI: 10.34740/kaggle/dsv/12992775
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.17071355
title: RareFold

description: All compressions are made with zstd here. You can get it here (and it's amazing - thank me later): https://github.com/facebook/zstd

 

params20000.npy - parameters for RareFold single-chain protein structure prediction

finetuned_params25000.npy - parameters for RareFold peptide binder design

1ssc.tar.zst - design results for PDB ID 1ssc

val.tar.zst - validation results

test.tar.zst - RareFold test set predictions (The same data AF3 is/can be evaluated on)

af3.tar.zst - AF3 predictions

native_valid_structures.tar.zst - native validation structures from the PDB

train_meta_20.csv - meta for train/val/test splits and 20% sequence identity cluster annotations

aa_count_per_chain.csv - Number of AAs of each type per chain id

aa_hist.csv - total occurrence of AA types in the dataset

immunogenicity_analysis.xlsx - results from the immunogenicity analysis of the peptide binders compared to the wild-type binder
DOI: 10.5281/zenodo.15077189
title: 3D models of deformed cave passages in Mescla Cave in the Maritimes Alps

description: We provide two 3D models of deformation mapped in the Mescla Cave in the Maritimes Alps (SE France).(1) The scan was produced as a 3D textured point cloud using an iPhone 13Pro LiDAR scanner. The scan shows a cave passage offset (23 cm)(2) The structure-from-motion textured model shows a cave wall with offset veins. The model was constructed using the standard approach using Agisoft Meatashape Professional (V 2.0.4).

The presented materials serve as supplementary documentation for the study of the Maritimes Alps  neotectonics, described in the manuscript: "Unexpected latest Pleistocene W-E compression in the Maritimes Alps (SE France): Insights from passage offset in Mescla Cave."
DOI: 10.5281/zenodo.15165582
title: 3D models of deformed cave passages in Mescla Cave in the Maritimes Alps

description: We provide two 3D models of deformation mapped in the Mescla Cave in the Maritimes Alps (SE France).(1) The scan was produced as a 3D textured point cloud using an iPhone 13Pro LiDAR scanner. The scan shows a cave passage offset (23 cm)(2) The structure-from-motion textured model shows a cave wall with offset veins. The model was constructed using the standard approach using Agisoft Meatashape Professional (V 2.0.4).

The presented materials serve as supplementary documentation for the study of the Maritimes Alps  neotectonics, described in the manuscript: "Unexpected latest Pleistocene W-E compression in the Maritimes Alps (SE France): Insights from passage offset in Mescla Cave."
DOI: 10.15468/dl.6eqwpz
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stachytarpheta jamaicensis",
 "Country is Dominican Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 87 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041842-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18150/dri55m
title: GPS- and GRACE-derived vertical displacements caused by groundwater mass changes

description: The files contain metadata for the article: Lenczuk, A., Ndehedehe, Ch., Klos, A., & Bogusz, J. (2023). The study of large-scale variability in total water storage within the context of modern satellite gravity missionsStudying spatio-temporal patterns of vertical displacements caused by groundwater mass changes observed with GPS. Remote Sensing of Environment, 292, 113597. DOI: 10.1016/j.rse.2023.113597.We have included values of linear trend and its uncertainty of vertical displacements induced by groundwater masses estimated for Gravity Recovery and Climate Experiment (GRACE) mascon solution and Global Positioning System (GPS) for global gridded data and selected GPS stations. We have also included time series of vertical displacements induced by groundwater masses. Groundwater time series are determined using GRACE-derived, GPS-observed, and WaterGAP Global Hydrological Model (WGHM)-predicted vertical displacements.This is the result of the National Science Center (NCN) project, Poland, grant number UMO-2021/41/N/ ST10/01472.W plikach znajdują się metadane do artykułu: Lenczuk, A., Ndehedehe, Ch., Klos, A., & Bogusz, J. (2023). The study of large-scale variability in total water storage within the context of modern satellite gravity missionsStudying spatio-temporal patterns of vertical displacements caused by groundwater mass changes observed with GPS. Remote Sensing of Environment, 292, 113597. DOI: 10.1016/j.rse.2023.113597.W plikach uwzględniliśmy wartości trendu liniowego i jego niepewność w odniesieniu do przemieszczeń pionowych wywołanych przez masy wód gruntowych, oszacowane dla rozwiązania maskonowego z GRACE (ang. Gravity Recovery and Climate Experiment) oraz GPS (ang. Global Positioning System) dla globalnych danych i wybranych stacji GPS. W plikach uwzględniliśmy również szeregi czasowe przemieszczeń pionowych wywołanych przez masy wód gruntowych. Szeregi czasowe wód gruntowych są określane na podstawie przemieszczeń pionowych uzyskanych z GRACE, GPS oraz globalnego modelu hydrologicznego WGHM (ang. WaterGAP Global Hydrological Model). Dane są wynikiem realizacji projektu Narodowego Centrum Nauki (NCN), grant nr UMO-2021/41/N/ ST10/01472.
DOI: 10.15468/dl.k9xwcv
title: Occurrence Download

description: A dataset containing 48023 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Luzula forsteri"
 ]
}

 The dataset includes 48023 records from 707 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041843-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nkmxjz
title: Occurrence Download

description: A dataset containing 21303 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Momordica charantia L."
 ]
}

 The dataset includes 21303 records from 634 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044588-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbtmis
title: Occurrence Download

description: A dataset containing 13195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 {
 "or" : [
 "TaxonKey is Thorella verticillato-inundata (Thore) Briq.",
 "TaxonKey is Trichomanes speciosum Willd.",
 "TaxonKey is Sanguisorba officinalis L.",
 "TaxonKey is Saxifraga haenseleri Boiss. & Reut.",
 "TaxonKey is Saxifraga rigoi Freyn ex Porta",
 "TaxonKey is Scirpus fluitans L.",
 "TaxonKey is Scrophularia sublyrata Brot.",
 "TaxonKey is Scorzonera reverchoni Debeaux",
 "TaxonKey is Serapias cordigera L.",
 "TaxonKey is Senecio adonidifolius Loisel.",
 "TaxonKey is Sibthorpia europaea L.",
 "TaxonKey is Teline patens (DC.) Talavera & P.E.Gibbs",
 "TaxonKey is Thymus funkii subsp. sabulicola (Coss.) Sánchez-Gómez",
 "TaxonKey is Thymus funkii subsp. burilloi Sánchez-Gómez",
 "TaxonKey is Thymus serpylloides subsp. gadorensis (Pau) Jalas",
 "TaxonKey is Valeriana officinalis L.",
 "TaxonKey is Puccinellia fasciculata subsp. pungens (Pau) W.E.Hughes",
 "TaxonKey is Platanthera algeriensis Batt. & Trab.",
 "TaxonKey is Biarum arundanum Boiss. & Reut.",
 "TaxonKey is Campanula fastigiata Dufour ex Schult.",
 "TaxonKey is Serratula monardii Dufour",
 "TaxonKey is Cressa cretica L.",
 "TaxonKey is Arabis pauciflora (Grimm) Garcke",
 "TaxonKey is Geranium bohemicum L.",
 "TaxonKey is Aeluropus littoralis (Gouan) Parl."
 ]
 }
 ]
}

 The dataset includes 13195 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011883-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8m7yra
title: Occurrence Download

description: A dataset containing 514 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Nothoprocta curvirostris P.L.Sclater & Salvin, 1873"
 ]
}

 The dataset includes 514 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000032-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ct2ht3
title: Occurrence Download

description: A dataset containing 320 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "TaxonKey is Coffea L."
 ]
}

 The dataset includes 320 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075593-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ha573h
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habenaria guaraensis J.A.N.Bat. & Bianch."
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163160-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xqjiuc
title: Occurrence Download

description: A dataset containing 115250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erinaceus Linnaeus, 1758",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 115250 records from 211 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011884-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7j855b
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hippeastrum harrisonii (Lindl.) Hook.f."
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163161-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8fhe2p
title: Occurrence Download

description: A dataset containing 447 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Acropora palmata (Lamarck, 1816)"
 ]
}

 The dataset includes 447 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284468-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rmurba
title: Occurrence Download

description: A dataset containing 1591 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Leptodactylus albilabris (Günther, 1859)"
 ]
}

 The dataset includes 1591 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044587-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8nnz2g
title: Occurrence Download

description: A dataset containing 17509 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-129.78516 50.43886,-117.83203 50.43886,-117.83203 57.95373,-129.78516 57.95373,-129.78516 50.43886))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ardea herodias Linnaeus, 1758"
 ]
}

 The dataset includes 17509 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0317172-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.br1ksd
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Laelia anceps Lindl.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 98 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011884-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3x39rz
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Oreolalax omeimontis (Liu & Hu, 1960)"
 ]
}

 The dataset includes 24 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044592-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0rc8uw
title: Occurrence Download

description: A dataset containing 62324 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sciurus carolinensis Gmelin, 1788"
 ]
}

 The dataset includes 62324 records from 147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011885-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qjz3h2
title: Occurrence Download

description: A dataset containing 577 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Opogona sacchari (Bojer, 1856)"
 ]
}

 The dataset includes 577 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284465-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vaegeu
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Basananthe heterophylla Schinz"
 ]
}

 The dataset includes 35 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044599-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bxekm3
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gongora horichiana Fowlie"
 ]
}

 The dataset includes 48 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163162-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.icsovg
title: Occurrence Download

description: A dataset containing 8174193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fungi",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Unknown evidence",
 "BasisOfRecord is Specimen"
 ]
 }
 ]
}

 The dataset includes 8174193 records from 821 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059559-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbwyvq
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Delphinium lipskyi Korsh."
 ]
}

 The dataset includes 10 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0168017-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wwuakr
title: Occurrence Download

description: A dataset containing 9064 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ghana",
 "DatasetKey is Neptune Deep-Sea Microfossil Occurrence Database"
 ]
}

 The dataset includes 9064 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029261-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8zxr08
title: Occurrence Download

description: A dataset containing 402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cystoseira tamariscifolia (Huds.) Papenf.",
 "Geometry POLYGON((-6 49,-6 53,1 53,1 49,-6 49))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 402 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001111-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qms4kw
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aristolochia thwaitesii Hook."
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012707-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.i1tesr
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Ceratozamia latifolia Miq.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 35 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011940-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w4zzpu
title: Occurrence Download

description: A dataset containing 210 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leucippus fallax (Bourcier, 1843)",
 "Country is Colombia"
 ]
}

 The dataset includes 210 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001111-150721130643939/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3y6sgm
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prunus hypotrichodes Cardot"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012714-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qf562
title: Occurrence Download

description: A dataset containing 296 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Platanthera tescamnis Sheviak & W.F.Jenn."
 ]
}

 The dataset includes 296 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0187359-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.