cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/4dn4svm3jb.1
title: Supplementary Dataset on the Docking of Phytoconstituents of Matcha Green Tea on SARS-CoV-2

description: Supplementary Dataset on the Docking of Phytoconstituents of Matcha Green Tea on SARS-CoV-2
DOI: 10.17632/h6gtvt32hd.1
title: Data for: Multi-stage Holocene evolution of the River Murray Estuary, South Australia

description: This dataset contains core logs, magnetic susceptibility, and scanning-XRF data (1 mm resolution; 24 elements) for 9 sediment cores sampled from Lake Albert, South Australia (-35.6, 139.3); one of the two 'Lower Lakes' that constitute the River Murray Estuary. Age-depth modelling results (BACON), laser diffraction grain-size data (1 cm resolution; Malvern Mastersizer 2000), and loss-on-ignition data (2 cm resolution) for one of the sediment cores are also included. This dataset accompanies the paper 'Multi-stage Holocene evolution of the River Murray Estuary, South Australia'.
DOI: 10.18462/iir.iccc.2020.292229
title: Less than 150 GWP options to replace R-452A for transport refrigeration.
DOI: 10.18462/iir.iccc.2020.292123
title: Validated numerical model of heat transfer in the forced air freezing of bulk packed whole chickens.
DOI: 10.17632/44p9ck395x.2
title: Supplementary information for "Plasma Proteomics identify Biomarkers and Pathogenesis of COVID-19"

description: Provided here are the supplementary information for the below manuscript published in Immunity entitled as "Plasma Proteomics identify Biomarkers and Pathogenesis of COVID-19".
DOI: 10.18462/iir.iccc.2020.314814
title: Refrigeration and sustainability in the seafood cold chain.
DOI: 10.6084/m9.figshare.13073045.v1
title: R0183_20170817a_videos

description: Rat 0183, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.34857/0095189
title: Plantwise Household Survey Data

description: Survey data collected in Malawi and Rwanda in 2017 for the Plantwise programme. Data collected includes: \r\n\r\n* Demographic information about farming households, including ages and education levels of household members\r\n* Reliance on farming activities for household income\r\n* Information on tomato growing practices\r\n* Information sources utilised by farmers\r\n* Information on the 2015 tomato cropping season \r\n* Reasons for failure of crops\r\n* Household assets \r\n\r\n\r\nCode books are also provided to aid in analysis\r\n\r\nThe following papers were produced using this data and are available for download below:\r\n\r\n* Bett et al., 2018: Impact of plant clinics on disease and pest management, tomato productivity and profitability in Malawi\r\n* Silvestri et al., 2019: Analysing the potential of plant clinics to boost crop protection in Rwanda through adoption of IPM: the case of maize and maize stem borers\r\n
DOI: 10.6084/m9.figshare.13073144
title: Redescobrindo a floresta decídua no Espírito Santo: o caso de São João de Petrópolis, Santa Teresa –– Rediscovering the deciduous forest in Espírito Santo: the case of São João de Petrópolis, Santa Teresa –– Material Suplementar / Supplementary Material

description: Precipitações mensais e anuais (mm) na série histórica 1977-2017 da estação meteorológica do Instituto Federal do Espírito Santo campus Santa Teresa, localizada em São João de Petrópolis, região central do Espírito Santo. Monthly and annual rainfall (mm) in the time-series 1977-2017 of the weather station of Instituto Federal do Espírito Santo campus Santa Teresa, located in São João de Petrópolis, central Espírito Santo.
DOI: 10.6084/m9.figshare.13073045
title: R0183_20170817a_videos

description: Rat 0183, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13073144.v1
title: Redescobrindo a floresta decídua no Espírito Santo: o caso de São João de Petrópolis, Santa Teresa –– Rediscovering the deciduous forest in Espírito Santo: the case of São João de Petrópolis, Santa Teresa –– Material Suplementar / Supplementary Material

description: Precipitações mensais e anuais (mm) na série histórica 1977-2017 da estação meteorológica do Instituto Federal do Espírito Santo campus Santa Teresa, localizada em São João de Petrópolis, região central do Espírito Santo. Monthly and annual rainfall (mm) in the time-series 1977-2017 of the weather station of Instituto Federal do Espírito Santo campus Santa Teresa, located in São João de Petrópolis, central Espírito Santo.
DOI: 10.25386/genetics.13072355
title: Supplemental Material for Gómez-Saldivar et al., 2020

description: Supplemental Figures and Tables
DOI: 10.25386/genetics.13072355.v1
title: Supplemental Material for Gómez-Saldivar et al., 2020

description: Supplemental Figures and Tables
DOI: 10.18462/iir.iccc.2020.309542
title: Enhancement of performance of a refrigerated locker by the addition of phase change material.
DOI: 10.25934/00004170.1
title: IPD datapackage for study 'Duloxetine 20/30 mg vs. Placebo in Major Depression' and research request: 'Tolerability of duloxetine in the elderly and in adults: a systematic review and individual patient data meta-analysis of randomized controlled trials versus placebo.'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5281/zenodo.4075336
title: On The Relation of Test Smells to Software Code Quality. Appendix.

description: Dataset of "On The Relation of Test Smells to Software Code Quality" This is the replication package of the paper "On The Relation of Test Smells to Software Code Quality", accepted at the 34th IEEE International Conference on Software Maintenance and Evolution (ICSME 18).
DOI: 10.5281/zenodo.4075335
title: On The Relation of Test Smells to Software Code Quality. Appendix.

description: Dataset of "On The Relation of Test Smells to Software Code Quality" This is the replication package of the paper "On The Relation of Test Smells to Software Code Quality", accepted at the 34th IEEE International Conference on Software Maintenance and Evolution (ICSME 18).
DOI: 10.25934/00004171.1
title: IPD datapackage for study 'A Double-Blind, Placebo- and Clomipramine-Controlled Study of Duloxetine in Patients with Major Depression' and research request: 'Tolerability of duloxetine in the elderly and in adults: a systematic review and individual patient data meta-analysis of randomized controlled trials versus placebo.'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5281/zenodo.4073519
title: Simulated pollen microscope slides for segmentation/bounding box regression and classification

description: <strong>Pollen dataset</strong> Sebastian Seurig, Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden<br> (https://orcid.org/0000-0001-6511-0102)<br> Peter Steinbach, Helmholtz AI, Artificial Intelligence Cooperation Unit, Helmholtz-Zentrum Dresden-Rossendorf<br> (https://orcid.org/0000-0002-4974-230X)<br> Nico Scherf, Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden and Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig<br> (https://orcid.org/0000-0003-4003-9121)<br> Ingo Röder, Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden This artificial dataset was created for testing machine learning models on segmentation or bounding box regression and classification tasks.<br> It contains 80.000 (1280x1280 RGB) images of airborne pollen of different sizes within their natural range: 2x10.000 images each Chenopodium bonus-henricus and Corylus colurna making up the medium-sized pollen 10.000 images Urtica dioica making up the smaller pollen 10.000 images Secale cereale making up the larger pollen 4x10.000 images each containing artifacts such as dust or bursted pollen and a mix of pollen in the following ratios:<br> - 'equal_split' 25% each class<br> - 'smaller_pollen_split' 70% Urtica dioica, *<br> - 'middle_pollen_split' 40% Corylus colurna, 10% Chenopodium bonus-henricus, *<br> - 'bigger_pollen_split' 70% Secale cereale, *<br> - * the rest of the pollen split equally between the remaining classes<br> Labels consist of : monochrome masks of each pollen slide (ignoring artifacts) for segmentation x and y-coordinates of the bounding boxes containing all pixels of each of the pollen for regression class names for each labeled pollen. For further questions and suggestions, please do not hesitate to contact the authors. Extensive code and configuration settings for the generator used can be found at https://github.com/seurig/slide-generator.<br> All raw images used to generate this dataset were taken from https://pollen.tstebler.ch/.
DOI: 10.5281/zenodo.4073518
title: Simulated pollen microscope slides for segmentation/bounding box regression and classification

description: <strong>Pollen dataset</strong> Sebastian Seurig, Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden<br> (https://orcid.org/0000-0001-6511-0102)<br> Peter Steinbach, Helmholtz AI, Artificial Intelligence Cooperation Unit, Helmholtz-Zentrum Dresden-Rossendorf<br> (https://orcid.org/0000-0002-4974-230X)<br> Nico Scherf, Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden and Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig<br> (https://orcid.org/0000-0003-4003-9121)<br> Ingo Röder, Institute for Medical Informatics and Biometry, Carl Gustav Carus Faculty of Medicine, TU Dresden This artificial dataset was created for testing machine learning models on segmentation or bounding box regression and classification tasks.<br> It contains 80.000 (1280x1280 RGB) images of airborne pollen of different sizes within their natural range: 2x10.000 images each Chenopodium bonus-henricus and Corylus colurna making up the medium-sized pollen 10.000 images Urtica dioica making up the smaller pollen 10.000 images Secale cereale making up the larger pollen 4x10.000 images each containing artifacts such as dust or bursted pollen and a mix of pollen in the following ratios:<br> - 'equal_split' 25% each class<br> - 'smaller_pollen_split' 70% Urtica dioica, *<br> - 'middle_pollen_split' 40% Corylus colurna, 10% Chenopodium bonus-henricus, *<br> - 'bigger_pollen_split' 70% Secale cereale, *<br> - * the rest of the pollen split equally between the remaining classes<br> Labels consist of : monochrome masks of each pollen slide (ignoring artifacts) for segmentation x and y-coordinates of the bounding boxes containing all pixels of each of the pollen for regression class names for each labeled pollen. For further questions and suggestions, please do not hesitate to contact the authors. Extensive code and configuration settings for the generator used can be found at https://github.com/seurig/slide-generator.<br> All raw images used to generate this dataset were taken from https://pollen.tstebler.ch/.
DOI: 10.5281/zenodo.4075346
title: To Mock or Not to Mock? Appendix

description: Mock Objects For Testing Java Systems<br> This is the replication package of the paper "Mock Objects For Testing Java Systems: Why and How Developers Use Them, and How They Evolve".
DOI: 10.5281/zenodo.4075345
title: To Mock or Not to Mock? Appendix

description: Mock Objects For Testing Java Systems<br> This is the replication package of the paper "Mock Objects For Testing Java Systems: Why and How Developers Use Them, and How They Evolve".
DOI: 10.6084/m9.figshare.13073189
title: Plantas medicinais e ritualísticas dos Kaiowá do Tekoha Taquara como contribuição para a demarcação da terra ancestral, Mato Grosso do Sul, Brasil –– Medicinal and ritualistic plants of the Kaiowá of Tekoha Taquara as a contribution to the demarcation of ancestral land, Mato Grosso do Sul, Brazil –– Material Suplementar / Supplementary Material

description: Lista das espécies vegetais citadas por informantes da Comunidade Kaiowá do <i>Tekoha</i> <i>Taquara</i>, Juti, MS, organizadas por família, espécie, voucher de herbário, nome em Guarani, tradução do nome Guarani para português, nome popular, parte da planta usada, uso relatado, categoria de uso conforme a Classificação Internacional de Doenças (ICD 2016) da Organização Mundial da Saúde, e o bioma em qual a planta foi coletada. List of botanical species cited by informants of the Kaiowá community of <i>Tekoha Taquara, </i>Juti, MS, organized by family, species, herbarium voucher, Guarani name, translation of Guarani name to Portuguese, popular name, part of the plant used, related use, use category given by the International Classification of Diseases (ICD 2016) of the World Health Organization, the biome in which the plant was collected.
DOI: 10.17632/dgyj3wwgd9.4
title: Ultrasonic Data of signals backscattered by mortar using the principal component analysis

description: Investigation of ultrasonic parameters of signals backscattered by mortar using the Principal Component Method
DOI: 10.5281/zenodo.4075318
title: When Testing Meets Code Review: Why and How Developers Review Tests (Appendix)

description: Dataset of "When Testing Meets Code Review: Why and How Developers Review Tests" This appendix material refers to the paper "When Testing Meets Code Review: Why and How Developers Review Tests" published in the Proceedings of the 40th International Conference on Software Engineering (ICSE 2018)
description: Updated version with better documentation.
DOI: 10.5281/zenodo.1172405
title: When Testing Meets Code Review: Why and How Developers Review Tests (Appendix)

description: Dataset of "When Testing Meets Code Review: Why and How Developers Review Tests" This appendix material refers to the paper "When Testing Meets Code Review: Why and How Developers Review Tests" published in the Proceedings of the 40th International Conference on Software Engineering (ICSE 2018)
description: Updated version with better documentation.
DOI: 10.5066/p9tj7s4o
title: Drone- and ground-based measurements of velocity, depth, and discharge collected during 2017-18 at the Arkansas and South Platte Rivers in Colorado and the Salcha and Tanana Rivers in Alaska, USA

description: The U.S. Geological Survey (USGS) is actively investigating the use of innovative remote-sensing techniques to estimate surface velocity and discharge of rivers in ungaged basins and river reaches that lack the infrastructure to install conventional streamgaging equipment. By coupling discharge algorithms and sensors capable of measuring surface velocity, streamgage networks can be established in regions where data collection was previously impractical or impossible. One of the remote-sensing techniques uses a Doppler (velocity) radar (QCam) mounted and integrated on a small unmanned aircraft system (sUAS or drone). QCam measures the along-track surface velocity by spot dwelling in a river cross section at a vertical where the maximum surface velocity is recorded. To evaluate the extensibility of the method, five science flights were conducted on four rivers of varying size including the Arkansas and South Platte Rivers in Colorado and the Salcha and Tanana Rivers in Alaska. QCam surface velocities and QCam river discharges were compared to conventional streamgaging methods.
DOI: 10.5281/zenodo.4075356
title: Dataset of "Test-Driven Code Review: An Empirical Study"

description: Dataset of "Test-Driven Review: An Empirical Study"<br> This appendix material refers to the paper "Test-Driven Review: An Empirical Study" published in the Proceedings of the 41st International Conference on Software Engineering (ICSE 2019)
description: Better documentation
DOI: 10.5281/zenodo.2553138
title: Dataset of "Test-Driven Code Review: An Empirical Study"

description: Dataset of "Test-Driven Review: An Empirical Study"<br> This appendix material refers to the paper "Test-Driven Review: An Empirical Study" published in the Proceedings of the 41st International Conference on Software Engineering (ICSE 2019)
description: Better documentation
DOI: 10.5066/p9mdew0d
title: Elevation of top of Precambrian rocks from previous USGS studies of the Colorado Plateau

description: For use as part of a regional petroleum assessment, the USGS in the early 1990's developed a dataset reporting elevation on the surface of the Precambrian basement of the central and southern Colorado Plateau and vicinity (Butler, 1991). This dataset was released as paper report that included a table of basement elevations at more than 3,700 control points, including outcrop data of Precambrian rock on the plateau periphery, plus borehole data, seismic data, and depth estimated from a variety of published maps and stratigraphic sections. A contoured map of these data was released as a figure in an interpretive report (Blank and others, 1998). This digital dataset contains spatial datasets corresponding to the elevation of the Precambrian basement tabulated by Butler (1991) and the derived contour map (Blank and others, 1998). Basement elevation at control points is contained within a point feature class within the geodatabase. Points are attributed by type of data, method used to estimate top of Precambrian rocks from the data, and an estimation of the confidence in the reported elevation values. Contoured elevation data are contained in a line feature class within the geodatabase. Both types of data are also saved as individual shapefiles. Nonspatial tables define the data sources, terminology, and methods used.
DOI: 10.25345/c5kj4t
title: MassIVE MSV000086254 - Respiratory vinyl chloride reductive dechlorination to ethene in TceA-expressing Dehalococcoides mccartyi
title: Organohalide-respiring Dehalococcoidia bacteria are one of the few microorganisms capable of transforming chlorinated solvents to benign ethene in anoxic environments. The tceA gene found in these bacteria, coding the trichloroethene-dechlorinating RDase TceA, is frequently detected in contaminated groundwater but not recognized as a biomarker for vinyl chloride detoxification. Here, we demonstrate that the tceA-carrying Dehalococcoides mccartyi (Dhc) strains FL2 and 195 grow with VC as electron acceptor when sufficient vitamin B12 is provided. Global proteomic profiling confirmed the predominant TceA expression in VC-grown Dhc FL2 cells, providing a line of evidence for the implication of TceA in respiratory VC reductive dechlorination.
DOI: 10.5281/zenodo.4075355
title: Short-term exposure to the simple polyphenolic compound gallic acid induces neuronal hyperactivity in zebrafish larvae

description: Zebrafish locomotor test Larval locomotion in zebrafish was investigated at 72 hpf using the automated analyzer DanioVision<sup>TM</sup> Observation Chamber (Noldus Information Technology). Larvae were individually exposed to 50 µg/ml GA dissolved in E3 medium. The activity was measured at three time points: 30, 60, and 180 min. The activity measured in treated and control larvae included: 1) total distance covered by each larva (total distance, in mm), 2) total time larvae spent moving (movement, in seconds), 3) mean velocity of each larva across movement measures (velocity, in mm/sec), 4) total number of rotations completed by each larva during the experiment (one rotation was counted every time larvae turned more than 180° left or right with respect to its own body axis, counted as the frequency of left and right rotations). Cadmium treatment of zebrafish larvae Two batches of wild-type larvae were exposed for 3 h (from 69 to 72 hpf) to 50 and 100 µM CdCl<sub>2</sub>·H<sub>2</sub>O in an E3 medium, respectively. Half of the 50 µM and half of the 100 µM treated larvae underwent the exposition to 50 µg/ml GA. The four obtained subgroups were: <em>i.</em> Cd 50 µM only treated larva; <em>ii.</em> <em>Cd 100</em> µM only treated; <em>iii</em>. Cd 50 µM exposed to GA larvae; and <em>iv</em>. 100 µM exposed to GA larvae. All the groups underwent the behavioral observations reported above. As control groups were used: one group (Control E3) consisting of larvae in E3 medium only, and a second control with larvae exposed to 50 µg/ml GA for 30 minutes only. Larval locomotion was evaluated in a 96-well plate using the automated analyzer DanioVision<sup>TM</sup> Observation Chamber (Noldus Information Technology). Each experiment was performed in triplicate. Neurotransmitter analyses Neur_data report the final concentration expressed as ng of neurotransmitter per larva.
DOI: 10.5281/zenodo.4075354
title: Short-term exposure to the simple polyphenolic compound gallic acid induces neuronal hyperactivity in zebrafish larvae

description: Zebrafish locomotor test Larval locomotion in zebrafish was investigated at 72 hpf using the automated analyzer DanioVision<sup>TM</sup> Observation Chamber (Noldus Information Technology). Larvae were individually exposed to 50 µg/ml GA dissolved in E3 medium. The activity was measured at three time points: 30, 60, and 180 min. The activity measured in treated and control larvae included: 1) total distance covered by each larva (total distance, in mm), 2) total time larvae spent moving (movement, in seconds), 3) mean velocity of each larva across movement measures (velocity, in mm/sec), 4) total number of rotations completed by each larva during the experiment (one rotation was counted every time larvae turned more than 180° left or right with respect to its own body axis, counted as the frequency of left and right rotations). Cadmium treatment of zebrafish larvae Two batches of wild-type larvae were exposed for 3 h (from 69 to 72 hpf) to 50 and 100 µM CdCl<sub>2</sub>·H<sub>2</sub>O in an E3 medium, respectively. Half of the 50 µM and half of the 100 µM treated larvae underwent the exposition to 50 µg/ml GA. The four obtained subgroups were: <em>i.</em> Cd 50 µM only treated larva; <em>ii.</em> <em>Cd 100</em> µM only treated; <em>iii</em>. Cd 50 µM exposed to GA larvae; and <em>iv</em>. 100 µM exposed to GA larvae. All the groups underwent the behavioral observations reported above. As control groups were used: one group (Control E3) consisting of larvae in E3 medium only, and a second control with larvae exposed to 50 µg/ml GA for 30 minutes only. Larval locomotion was evaluated in a 96-well plate using the automated analyzer DanioVision<sup>TM</sup> Observation Chamber (Noldus Information Technology). Each experiment was performed in triplicate. Neurotransmitter analyses Neur_data report the final concentration expressed as ng of neurotransmitter per larva.
DOI: 10.6084/m9.figshare.13073252
title: Compound intersection target

description: 黄芪化合物与CRPC的相交数据
DOI: 10.6084/m9.figshare.13073252.v1
title: Compound intersection target

description: 黄芪化合物与CRPC的相交数据
DOI: 10.6084/m9.figshare.13073237
title: dock fraction

description: 黄芪活性化合物与CRPC分子对接的数据
DOI: 10.6084/m9.figshare.13073156
title: R0183_20170818a_videos

description: Rat 0183, skilled reaching data collected in Leventhal laboratory by Alexandra Bova