cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10579731
title: Model Generation from Requirements with LLMs: an Exploratory Study - Replication Package

description: This is a replication package for the paper "Model Generation from Requirements with LLMs: an Exploratory Study", by Sallam Abualhaija, Chetan Arora, and Alessio Ferrari.

Abstract: Complementing natural language (NL) requirements with graphical models can improve stakeholders’ communication and provide directions for system design. However, creating models from requirements involves manual effort. The advent of generative large language models (LLMs), ChatGPT being a notable example, offers promising avenues for automated assistance in model generation. This paper investigates the reliability of ChatGPT in generating sequence diagrams from NL requirements. Specifically, we conduct a qualitative study examining the sequence diagrams generated by ChatGPT for 28 requirements documents of various types and from different domains. Our study aims to uncover potential issues that emerge in the models generated by ChatGPT, thereby hindering its applicability in practice. Observations have systematically been captured through evaluation logs, and categorized through thematic analysis. Our results indicate that, although the models generally conform to the standard and exhibit a reasonable level of understandability, their correctness with respect to the specified requirements often presents challenges. This issue is particularly pronounced in the presence of requirements smells, such as ambiguity and inconsistency. The insights derived from this study can influence the practical utilization of LLMs in the RE process, and open the door to novel RE-specific prompting strategies targeting effective model generation.

The replication package consists of the following folders:

logs: includes the evaluation logs produced by each evaluator

original-documents: includes the original requirements documents used for the evaluation

RQ1 - quantitative analysis: includes the analysis made on the scores given to each model and model variant. It includes five files:

- results.csv: numerical results of the evaluation for each criterion- analysis-results.Rmd: R file used to perform the quantitative analysis (requires R Studio to be executed)- analysis-results.html: html file produced by analysis-results.Rmd- cross-check.csv: file with the cross-checking of the two assessors applied to a subset of the models- symmary_results.xlsx: final output of the quantitative results in terms of Wilcoxon signed rank tests

RQ2 - thematic analysis: includes the codebook produced by the thematic analysis of the issues in generating models with ChatGPT
DOI: 10.5281/zenodo.10911092
title: Model Generation from Requirements with LLMs: an Exploratory Study - Replication Package

description: This is a replication package for the paper "Model Generation from Requirements with LLMs: an Exploratory Study", by Sallam Abualhaija, Chetan Arora, and Alessio Ferrari.

Abstract: Complementing natural language (NL) requirements with graphical models can improve stakeholders’ communication and provide directions for system design. However, creating models from requirements involves manual effort. The advent of generative large language models (LLMs), ChatGPT being a notable example, offers promising avenues for automated assistance in model generation. This paper investigates the reliability of ChatGPT in generating sequence diagrams from NL requirements. Specifically, we conduct a qualitative study examining the sequence diagrams generated by ChatGPT for 28 requirements documents of various types and from different domains. Our study aims to uncover potential issues that emerge in the models generated by ChatGPT, thereby hindering its applicability in practice. Observations have systematically been captured through evaluation logs, and categorized through thematic analysis. Our results indicate that, although the models generally conform to the standard and exhibit a reasonable level of understandability, their correctness with respect to the specified requirements often presents challenges. This issue is particularly pronounced in the presence of requirements smells, such as ambiguity and inconsistency. The insights derived from this study can influence the practical utilization of LLMs in the RE process, and open the door to novel RE-specific prompting strategies targeting effective model generation.

The replication package consists of the following folders:

logs: includes the evaluation logs produced by each evaluator

original-documents: includes the original requirements documents used for the evaluation

RQ1 - quantitative analysis: includes the analysis made on the scores given to each model and model variant. It includes five files:

- results.csv: numerical results of the evaluation for each criterion- analysis-results.Rmd: R file used to perform the quantitative analysis (requires R Studio to be executed)- analysis-results.html: html file produced by analysis-results.Rmd- cross-check.csv: file with the cross-checking of the two assessors applied to a subset of the models- symmary_results.xlsx: final output of the quantitative results in terms of Wilcoxon signed rank tests

RQ2 - thematic analysis: includes the codebook produced by the thematic analysis of the issues in generating models with ChatGPT
DOI: 10.5281/zenodo.7839674
title: VIIRS-derived annual mean chlorophyll-a in China large lakes from 2012 to 2021

description: This dataset included annual mean Chl-a in China's large lakes (>50 km2) derived from VIIRS-SNPP imagery from 2012 to 2021. The dataset is stored as the Geo-Tiff data.


To generate this dataset, we develop a practical deep neural network (DNN) model .  The DNN model performed satisfactory performance on Chl-a retrievals (MR = 0.86, MAPE = 32%, Bias = 5%) over the three magnitudes (0.1–300 μg L−1) spanning clear/deep to turbid/shallow waters, with significant improvements compared with the existing algorithms and other machine learning approaches. 


The dataset is related to a under-review manuscript and we will release it when the paper is published.
DOI: 10.15468/dl.e2ddsd
title: Occurrence Download

description: A dataset containing 1101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erodium stephanianum Willd.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1101 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090314-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25921/qc84-dy18
title: EK80 Water Column Sonar Data Collected During SME80-201901 Deployment
DOI: 10.15468/dl.wehgej
title: Occurrence Download

description: A dataset containing 293 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron capitatum Maxim."
 ]
}

 The dataset includes 293 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090316-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.82bps4
title: Occurrence Download

description: A dataset containing 394 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Potamogeton distinctus A.Benn.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 394 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090315-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25532863.v2
title: The soil P fractions, PCGs abundances, P cycling process abundance, and soil properties

description: Soil metagenomic data of alpine meadow on the Tibetan Plateau under warming and altered precipitation.The warming-by-precipitation experiment was established in May 2015 at the Alpine Research Station (33°59’N, 102°00’E, ca. 3538 m above sea level) in the eastern Gannan Autonomous Prefecture, Gansu Province, China.A two-factor full factorial interaction manipulation experiment was designed with a randomized block design, including two levels of atmospheric temperature (ambient temperature [T<sup>0</sup>] and warming [T<sup>+</sup>]) and three levels of precipitation (ambient precipitation [nP], 30% precipitation reduction [-P], and 30% precipitation increase [+P]), totally resulting in six treatment combinations. Specifically, six treatments were conducted, including (1) T<sup>0</sup>-P, (2) T<sup>+</sup>-P, (3) T<sup>0</sup>nP, (4) T<sup>+</sup>nP, (5) T<sup>0</sup>+P, and (6) T<sup>+</sup>+P. Each treatment was replicated in four fields (four plots, each 4 m × 4 m). The plots within each block were separated by access paths that were 1.5 m wide, while the distance between adjacent blocks was 5 m.Due to the absence of electricity in the field, the warming treatment was achieved by installing four hexagonal open-top chambers into each plot, which consisted of six transparent polymethyl methacrylate (PMMA) isosceles trapezoidal plates measuring 0.59 m and 0.75 m wide at the top and bottom, respectively, and 0.52 m tall. These devices resulted in an average daily air temperature increase of 1.54 ± 0.07 °C (mean ± standard error) at 15 cm above the ground throughout the growing season (Zhang et al., 2020). The precipitation manipulations in each plot were achieved by deploying rainfall-excluding shelters periodically and individually. Furthermore, distinct precipitation treatments were implemented in each plot throughout the period. Specifically, PMMA shelters were placed 1 m high above the soil to intercept 30% of rainfall for the decreased precipitation (T<sup>0</sup>-P and T<sup>+</sup>-P) treatments. This rainwater was collected and evenly distributed among the nearest increased precipitation (T<sup>0</sup>+P and T<sup>+</sup>+P) plots throughout the growing season.
DOI: 10.15468/dl.tgupzx
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron carneum Hutch."
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090317-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8fa8yn
title: Occurrence Download

description: A dataset containing 1645 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geranium sibiricum L.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1645 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090318-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15129/f63d6f9f-ddcc-4f82-8cb2-302aeaf5bf54
title: Data For: "Coupling Colloidal Quantum Dot Supraparticle Microlasers with Surface Plasmon Resonances via Plasmonic Gold Substrates"

description: This data relates to an article published in the proceedings of the SPIE:

Coupling Colloidal Quantum Dot Supraparticle Microlasers with Surface Plasmon Resonances via Plasmonic Gold Substrates

Data collected was used to produce figures and to describe experimental findings. This has been compiled into a single Excel spreadsheet containing: Absorption data, Laser transfer functions under pulsed excitation, emission under continuous wave excitation, and size distributions.

Embargo end date 12/04/24
DOI: 10.15468/dl.y4hhs3
title: Occurrence Download

description: A dataset containing 179 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hemerocallis citrina Baroni",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 179 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090319-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z6k2nm
title: Occurrence Download

description: A dataset containing 34971 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Chenopodium ficifolium Sm.)"
 ]
}

 The dataset includes 34971 records from 306 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090320-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10390254
title: Potential energy surface and rovibrational line lists for thiopropynal

description: Molpro restart files (ASCII) for the XSURF program of the potential energy and dipole moment surfaces of thiopropynal. Rovibrational line list (ASCII) obtained from RVCI calculations. Data refer to the publication Rovibrational calculations without model Hamiltonians: the infrared and microwave spectra of thiopropynal (https://doi.org/10.1002/qua.27378).
DOI: 10.5281/zenodo.10390255
title: Potential energy surface and rovibrational line lists for thiopropynal

description: Molpro restart files (ASCII) for the XSURF program of the potential energy and dipole moment surfaces of thiopropynal. Rovibrational line list (ASCII) obtained from RVCI calculations. Data refer to the publication Rovibrational calculations without model Hamiltonians: the infrared and microwave spectra of thiopropynal (https://doi.org/10.1002/qua.27378).
DOI: 10.15468/dl.cdyrx5
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron carrii Sleumer"
 ]
}

 The dataset includes 18 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090321-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.szk2ag
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelargonium ×hortorum L.H.Bailey",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 19 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090323-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tv2p65
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tulipa gesneriana L.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090324-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4vnfzs
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron carringtoniae F.Muell."
 ]
}

 The dataset includes 22 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090326-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7r3v3h
title: Occurrence Download

description: A dataset containing 1437 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chiasmodon niger Johnson, 1864"
 ]
}

 The dataset includes 1437 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090325-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dww9gz
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tropaeolum majus L.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 90 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090328-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yx7rjv
title: Occurrence Download

description: A dataset containing 1374 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lilium brownii F.E.Br. ex Miellez",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1374 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090327-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m2ja7p
title: Occurrence Download

description: A dataset containing 21233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is BEN",
 "TaxonKey is one of (Adansonia digitata L., Berlinia grandiflora (Vahl) Hutch. & Dalziel, Isoberlinia Craib & Stapf, Diospyros mespiliformis Hochst. ex A.DC., Tamarindus indica L., Syzygium guineense (Willd.) DC., Breonadia salicina (Vahl) Hepper & J.R.I.Wood)"
 ]
}

 The dataset includes 21233 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090329-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.33zr4t
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Herminium edgeworthii (Hook.f. ex Collett) X.H.Jin, Schuit., Raskoti & Lu Q.Huang"
 ]
}

 The dataset includes 112 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090331-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.34n8nb
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron carstensense Wernham"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090332-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtz7dt
title: Occurrence Download

description: A dataset containing 2463 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leptopus chinensis (Bunge) Pojark.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2463 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090333-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zghc6a
title: Occurrence Download

description: A dataset containing 501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Allium senescens L.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 501 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090334-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cnnvhu
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron catacosmum Balf.fil. ex Tagg"
 ]
}

 The dataset includes 46 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090335-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.966812
title: Enzyme activities of multiple populations of the northern shrimp (Pandalus borealis) exposed to global change drivers

description: Northern shrimp Pandalus borealis collected from four distinct geographic origins (i.e. St. Lawrence Estuary (SLE) 48° 35' N, 68° 35' W, May 2018; Eastern Scotian Shelf (ESS), 45° 23' N, 61° 04' W, February 2019; Esquiman Channel (EC), 50° 44' N, 57°29' W, July 2019; and Northeast Newfoundland Coast (NNC), 50° 18' N, 54° 16' W, November 2019) were exposed for 30 days under laboratory conditions to different ocean global change scenarios of temperature (2, 6, and 10 °C) and pH (7.75 and 7.40), in isolation and in combination. The dataset contains the specific activity of energetic metabolism key enzymes measured in female shrimp, expressed as U g⁻¹ prot.
description: This project was further supported by:- Strategic Program for Ecosystem- Based Research and Advice grant (SPERA)- Aquatic Climate Change Adaptation Services Program grant (ACCASP)- MITACS-Ouranos Accelerate grant- Réal-Decoste Ouranos scholarship, Award no. 286109
DOI: 10.15468/dl.msmkjt
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hyptis suaveolens (L.) Poit.",
 "Year 2000-2024"
 ]
}

 The dataset includes 39 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090338-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ny4uw
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aspidistra elatior Blume",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 53 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090340-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.