cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15322097
title: AffRoDB: Curated Mappings of affiliation strings to ROR identifiers

description: AffRoDB is a curated dataset that contains mappings of raw affiliation strings from Crossref to Research Organization Registry (ROR) IDs. Each dataset record has been evaluated by multiple experts who mapped an affiliation string to a ROR ID that represents the respective organization or its parent. Each record includes the DOI of the respective publication, the affiliation string used, the expert judgments, and final IDs that have been assigned to the string based on the expert judgements. The aim of this dataset is to facilitate the evaluation and benchmarking of methodologies for institutional affiliation disambiguation by offering a high-quality, transparently created, and frequently updated ground truth dataset. This version of the dataset is based on the January 2024 release of the ROR database.

Dataset preparation

We randomly selected approximately ~1500 records from Crossref, each with non-empty affiliation lists. Each affiliation string was evaluated by two experts (PhDs or PhD candidates) who were tasked to find any relevant ROR ID and assign a label to the string:





EXACT: If the ROR ID found corresponded precisely to the most specific organization mentioned in the string.




ANCESTOR: If the ROR ID corresponded to a parent organization mentioned in the string.




VAGUE: If no relevant ROR ID was detected or the expert could not confidently assign a corresponding ROR ID.



In cases of disagreement between the two experts, a third expert reviewed the affiliation string and finalized the ROR IDs and their labels.

By removing the affiliations labeled as VAGUE, we produced a dataset of raw affiliation strings along with their corresponding ROR links. A summary of key dataset statistics is provided in the table below.




Raw affiliation strings
1,374


DOIs
1,261


ROR IDs
1,484


Unique ROR IDs
1,048


Exact matches
381


Ancestor matches
1,103




Dataset structure

The dataset is provided in a JSONL format, where each line represents a single JSON object. Each JSON object contains four main fields:





raw_affiliation_string: A string representing the raw affiliation data.




extracted_dois: An array of DOIs (Digital Object Identifiers) from which the affiliation was extracted.




expert_judgements: An array of objects representing evaluations by experts, where each object includes:






expert_id: The ID of the expert, a positive integer.




matches: An object with two fields:






exact: An array of strings denoting exact matches.




ancestor: An array of strings denoting matches to parent organizations.






final_judgement: An object representing the final evaluation that includes:






exact: An array of strings denoting exact matches.




ancestor: An array of strings denoting matches to parent organizations.
DOI: 10.5281/zenodo.15322098
title: AffRoDB: Curated Mappings of affiliation strings to ROR identifiers

description: AffRoDB is a curated dataset that contains mappings of raw affiliation strings from Crossref to Research Organization Registry (ROR) IDs. Each dataset record has been evaluated by multiple experts who mapped an affiliation string to a ROR ID that represents the respective organization or its parent. Each record includes the DOI of the respective publication, the affiliation string used, the expert judgments, and final IDs that have been assigned to the string based on the expert judgements. The aim of this dataset is to facilitate the evaluation and benchmarking of methodologies for institutional affiliation disambiguation by offering a high-quality, transparently created, and frequently updated ground truth dataset. This version of the dataset is based on the January 2024 release of the ROR database.

Dataset preparation

We randomly selected approximately ~1500 records from Crossref, each with non-empty affiliation lists. Each affiliation string was evaluated by two experts (PhDs or PhD candidates) who were tasked to find any relevant ROR ID and assign a label to the string:





EXACT: If the ROR ID found corresponded precisely to the most specific organization mentioned in the string.




ANCESTOR: If the ROR ID corresponded to a parent organization mentioned in the string.




VAGUE: If no relevant ROR ID was detected or the expert could not confidently assign a corresponding ROR ID.



In cases of disagreement between the two experts, a third expert reviewed the affiliation string and finalized the ROR IDs and their labels.

By removing the affiliations labeled as VAGUE, we produced a dataset of raw affiliation strings along with their corresponding ROR links. A summary of key dataset statistics is provided in the table below.




Raw affiliation strings
1,374


DOIs
1,261


ROR IDs
1,484


Unique ROR IDs
1,048


Exact matches
381


Ancestor matches
1,103




Dataset structure

The dataset is provided in a JSONL format, where each line represents a single JSON object. Each JSON object contains four main fields:





raw_affiliation_string: A string representing the raw affiliation data.




extracted_dois: An array of DOIs (Digital Object Identifiers) from which the affiliation was extracted.




expert_judgements: An array of objects representing evaluations by experts, where each object includes:






expert_id: The ID of the expert, a positive integer.




matches: An object with two fields:






exact: An array of strings denoting exact matches.




ancestor: An array of strings denoting matches to parent organizations.






final_judgement: An object representing the final evaluation that includes:






exact: An array of strings denoting exact matches.




ancestor: An array of strings denoting matches to parent organizations.
DOI: 10.15468/dl.22euyd
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ardisia sideromalla K.Schum."
 ]
}

 The dataset includes 12 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012460-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wjpknv
title: Occurrence Download

description: A dataset containing 3462 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "StateProvince is one of (陕西, 甘肃, 宁夏, 青海, 新疆)",
 "TaxonKey is Populus L."
 ]
}

 The dataset includes 3462 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066343-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yw4xsa
title: Occurrence Download

description: A dataset containing 393 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diodora ruppellii (G.B.Sowerby I, 1835)"
 ]
}

 The dataset includes 393 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086257-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nzy6e8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gephyromantis thelenae (Glaw & Vences, 1994))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066349-230224095556074/datasets/export for details.
DOI: 10.15468/dl.ocqm9i
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036256-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fz5cs
title: Occurrence Download

description: A dataset containing 10382 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 11.407180816939",
 "DecimalLongitude is less than 11.4102403701234",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 10382 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012448-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9exvxs
title: Occurrence Download

description: A dataset containing 77353 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Oceanodroma homochroa (Coues, 1864), Phoebastria nigripes (Audubon, 1839))"
 ]
}

 The dataset includes 77353 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086252-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7x5yy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Microkayla melanocheira (De la Riva, Ríos & Aparicio, 2016))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066378-230224095556074/datasets/export for details.
DOI: 10.15468/dl.u42p68
title: Occurrence Download

description: A dataset containing 83151 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Berteroa incana (L.) DC.",
 "HasCoordinate is true",
 "Year is greater than or equal to 1900",
 "BasisOfRecord is one of (Human Observation, Specimen, Unknown evidence)"
 ]
}

 The dataset includes 83151 records from 486 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066372-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ypuysz
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025436-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fz5fxm
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ardisia sibulanensis Elmer"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012451-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qsdve7
title: Occurrence Download

description: A dataset containing 238 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diodora singaporensis (Reeve, 1850)"
 ]
}

 The dataset includes 238 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086262-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xkhnz7
title: Occurrence Download

description: A dataset containing 2164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Country is one of (United States of America, Mexico, Canada)",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Aimophila rufescens (Swainson, 1827)"
 ]
}

 The dataset includes 2164 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066361-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ra4qg8
title: Occurrence Download

description: A dataset containing 1440 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 11.4041212637546",
 "DecimalLongitude is less than 11.407180816939",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1440 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012444-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.smzp76
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diodora variegata (G.B.Sowerby II, 1862)"
 ]
}

 The dataset includes 143 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086268-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v09exy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 0 records from 18734 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000549-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110595414
title: Persepolis Fortification Aramaic Text 307, PFAT 307

description: [Text Description:] Administrative text with seal PFATS 0305. ❧ [Text or Publication Number Note:] PFAT 307, Bowman 307 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0305 on upper edge, reverse, bottom edge, flat edge.
DOI: 10.25549/inscriptifact-ouc110590797
title: Persepolis Fortification Aramaic Text 237, PFAT 237

description: [Text Description:] Administrative text with seal PFATS 0013 ❧ [Text or Publication Number Note:] PFAT 237, Bowman 237 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink and incised inscription. Seal impression PFATS 0013 on obverse, upper edge, reverse, bottom edge, flat edge.
DOI: 10.25549/inscriptifact-ouc1sto1607780
title: InscriptiFact -- an image database of inscriptions and artifacts

description: The InscriptiFact Collection is designed to allow access via the Internet to high-resolution images of ancient inscriptions and artifacts, primarily from the Near Eastern and Mediterranean Worlds. The targeted inscriptions constitute some of the world’s earliest written records, which are mostly housed in a number of international museums and libraries, as well as field projects where inscriptions still remain in situ. Included, for example, are, selected Dead Sea Scrolls; cuneiform tablets from Mesopotamia, Persia, Canaan and Egypt; early Jewish papyri from Egypt; lapidary inscriptions, primarily from Jordan, Lebanon and Cyprus; inscriptions on a variety of hard media (e.g., ostraca, copper, semi-precious stones, jar handles) mostly written in early Canaanite, Phoenician, Hebrew, Aramaic, Ammonite and Edomite; and much more. These ancient texts are foundational documents that serve as a point of reference for Judaism, Christianity, Islam and the cultures out of which they emerged. The name "InscriptiFact" is intended to convey the concept of a scholarly archive based on "facts" about "inscriptions" and "artifacts." West Semitic Research Project (WSRP) under the auspices of the University of Southern California (USC) is broadly acknowledged as a leader in the application of photographic and digital technologies to capture and analyze data of ancient texts. The West Semitic Research image archive now contains approximately 1,500,000 images. Important! Search terms with more than one word or number need to be enclosed in quotation marks.Guide to Searching InscriptiFact
DOI: 10.25549/jrbm-c91-732
title: Kankai ibun, vol. 5, 1807

description: Kankai ibun, [1807], volume 5 = Description and travel of circumnavigation of seas, [1807], volume 5 = 環海 異聞 五 文化 4. Volume five of a manuscript by Gentaku Ōtsuki and Kōkyō Shimura who drew from four Japanese fishermen the story of their voyage around the world during repeated interviews. The Kankai Ibun is an account of their journey when they were sent off-course en route to the capital, Edo. The fishermen were rescued by a Russian ship and taken to late 18th / early 19th century Europe and, most especially, Russia.; The cargo ship, Wakamiyamaru, left from the port of Ishimaki in Sendai-han, today’s Miyagi Prefecture, in Japan carrying rice and lumber with 16 crew members for Edo, today’s Tokyo, on November 27th, 1793. Shipwrecked and drifted in the Pacific Ocean for half a year, they finally landed in one of the islands of the Andreanof Islands, a part of the Aleutian Islands on May 10th, 1794. They were transferred to Irkutsk by Russians where they stayed until the spring of 1803. They were then called in by Alexander I of Russia to St. Petersburg where they stayed from April to June in 1803, and from where they started their journey back home. They were included in the Rezanov mission on the first Russian global circumnavigation by a ship Nadezhda. It took them 16 months to reach the port of Nagasaki, Japan in September, 1804 since they left in June, 1803. Of the sixteen, five crewmen got on board. Four returned home in Sendai; one, who had become an interpreter, returned to Russia with Rezanov.
DOI: 10.25549/inscriptifact-ouc110590779
title: Persepolis Fortification Aramaic Text 237, PFAT 237

description: [Text Description:] Administrative text with seal PFATS 0013 ❧ [Text or Publication Number Note:] PFAT 237, Bowman 237 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink and incised inscription. Seal impression PFATS 0013 on obverse, upper edge, reverse, bottom edge, flat edge.
DOI: 10.25549/inscriptifact-ouc110595411
title: Persepolis Fortification Aramaic Text 307, PFAT 307

description: [Text Description:] Administrative text with seal PFATS 0305. ❧ [Text or Publication Number Note:] PFAT 307, Bowman 307 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0305 on upper edge, reverse, bottom edge, flat edge.
DOI: 10.25549/jrbm-c91-731
title: Kankai ibun, vol. 5, 1807

description: Kankai ibun, [1807], volume 5 = Description and travel of circumnavigation of seas, [1807], volume 5 = 環海 異聞 五 文化 4. Volume five of a manuscript by Gentaku Ōtsuki and Kōkyō Shimura who drew from four Japanese fishermen the story of their voyage around the world during repeated interviews. The Kankai Ibun is an account of their journey when they were sent off-course en route to the capital, Edo. The fishermen were rescued by a Russian ship and taken to late 18th / early 19th century Europe and, most especially, Russia.; The cargo ship, Wakamiyamaru, left from the port of Ishimaki in Sendai-han, today’s Miyagi Prefecture, in Japan carrying rice and lumber with 16 crew members for Edo, today’s Tokyo, on November 27th, 1793. Shipwrecked and drifted in the Pacific Ocean for half a year, they finally landed in one of the islands of the Andreanof Islands, a part of the Aleutian Islands on May 10th, 1794. They were transferred to Irkutsk by Russians where they stayed until the spring of 1803. They were then called in by Alexander I of Russia to St. Petersburg where they stayed from April to June in 1803, and from where they started their journey back home. They were included in the Rezanov mission on the first Russian global circumnavigation by a ship Nadezhda. It took them 16 months to reach the port of Nagasaki, Japan in September, 1804 since they left in June, 1803. Of the sixteen, five crewmen got on board. Four returned home in Sendai; one, who had become an interpreter, returned to Russia with Rezanov.
DOI: 10.25549/inscriptifact-ouc110590775
title: Persepolis Fortification Aramaic Text 237, PFAT 237

description: [Text Description:] Administrative text with seal PFATS 0013 ❧ [Text or Publication Number Note:] PFAT 237, Bowman 237 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink and incised inscription. Seal impression PFATS 0013 on obverse, upper edge, reverse, bottom edge, flat edge.
DOI: 10.25549/inscriptifact-ouc110595410
title: Persepolis Fortification Aramaic Text 307, PFAT 307

description: [Text Description:] Administrative text with seal PFATS 0305. ❧ [Text or Publication Number Note:] PFAT 307, Bowman 307 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0305 on upper edge, reverse, bottom edge, flat edge.