cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24487051.v1
title: Supplementary Material for: A Case of Dellen Formation Following 27-Gauge Vitrectomy with Rapid Improvement by Scleral and Conjunctival Sutures

description: Dellen is a corneal disease characterized by shallow, saucer-like excavations at the corneal margin. Herein, we presented a case of dellen formation that developed following a 27-gauge pars plana vitrectomy (PPV) and was rapidly resolved using scleral and conjunctival sutures. A 73-year-old woman underwent a 27-gauge PPV for the epiretinal membrane of the right eye. Intraoperatively, owing to coexisting diabetic retinopathy, the peripheral vitreous was shaved, and retinal photocoagulation was performed on the peripheral retina. The intraocular pressure (IOP) was 15 mmHg on one day after the PPV and on postoperative day 4; however, on day 14, the IOP decreased to 10 mmHg, and conjunctival bleb formation was observed. By day 18, the bleb height remained unchanged, and dellen formation was noted at the corneal periphery. Because of marked corneal thinning, conjunctival and scleral sutures were placed 20 days following the PPV. Intraoperative findings revealed leakage from the scleral wound at the trocar puncture site. The IOP increased to 20 mmHg at 19 h following the suture resulting in the disappearance of the bleb and dellen. Since then, the bleb or dellen did not recur. In conclusion, we encountered a case of late-onset scleral wound cleavage 2 weeks following microincision vitreous surgery, resulting in bleb and dellen formation, which was immediately managed by the scleral and conjunctiva suturing.
DOI: 10.6084/m9.figshare.13525568.v2
title: BEdeep: an in silico tool for prediction of base editor efficiencies at on- and off-target loci

description: The outcomes dataset of gRNAs for ABE and CBE in HEK293T or HeLa cells.
DOI: 10.6084/m9.figshare.25756938.v2
title: Dataset of "Genomic signature of completely cleistogamous lineages in the non-photosynthetic orchid Gastrodia"

description: Dataset of "Genomic signature of completely cleistogamous lineages in the non-photosynthetic orchid Gastrodia"
DOI: 10.6084/m9.figshare.26198351.v1
title: Supplementary Material for: Renal impairment of proximal tubular injury caused by red yeast rice supplement: Report of two cases

description: Introduction: Drug-induced tubulointerstitial injury is a common cause of renal impairment. Since the mechanisms of drug-induced tubular injury are diverse, various treatment approaches are needed according to the pathogenesis. Renal biopsy is indispensable to determine not only the pathological diagnosis, but also the underlying mechanism and guide appropriate treatment. Most recently, one of the red yeast supplements has been widely highlighted as a novel cause of tubular damage, mainly in Japan and Asia. However, neither detailed pathological findings nor the mechanism of renal impairment has been sufficiently reported.
Case presentation: Two cases of renal impairment after taking red yeast supplement internally are presented. Both cases showed renal dysfunction with low uric acid, potassium, and phosphorus levels, characteristic features of Fanconi syndrome. The renal biopsy findings of both cases showed severe injury to the proximal tubules with mild inflammatory cell infiltration. The proximal tubules exhibited diffuse loss of the brush border, flattening, and tubular lumen dilation. Immunofluorescence showed no deposition of immunoglobulin and complement in the glomeruli and tubules. Electron microscopic findings indicated proximal tubular damage without crystal deposition. Moreover, immunohistochemistry using the proximal tubular marker CD10 and a marker for distal tubules including the loop of Henle, E-cadherin, collectively demonstrated that the focus of renal injury in both cases was mainly the proximal tubules.
Conclusions: The red yeast rice supplement itself, its metabolized product, or other unknown contaminant components might directly induce proximal tubulopathy rather than an allergic reaction-related tubulointerstitial nephritis.
DOI: 10.6084/m9.figshare.28788605.v1
title: AUS_Data_Repos.xlsx

description: This survey collects information on levels of cultural participation and other metrics and instruments that may have a direct or indirect impact on, or may be a desired or unintended consequence of, cultural participation. The survey was designed and conducted in Australia in July 2024 using Qualtrics. Participant management, including recruitment and initial screening, was carried out through Prolific.The survey covers a wide range of topics, including general demographic and economic questions, as well as items on attendance at cultural events or venues (active cultural participation) and on consumption of culture at home or in private spaces (passive cultural participation). This information was asked following the model of the National Arts Participation Survey (Australia). In addition, aspects related to cultural creation and barriers and enablers of cultural participation were also addressed, and questions aimed at eliciting cultural capital were included. Instruments were also included to assess participants' personality, curiosity, values and subjective well-being.The survey consisted of 12 sections and was about 18 minutes in length according to an automatic estimate made by Qualtrics. Responses were received from 584 people, of which 26 were excluded for duplication of information or for failing the attention check questions, resulting in a final sample of 558 participants drawn from the Australian population.
DOI: 10.6084/m9.figshare.25283137.v1
title: Supplementary Material for: Independent Association Between Cognitive Frailty and Cardio-Ankle Vascular Index in Community-Dwelling Older Adults

description: Introduction 
Although arterial stiffness has been suggested to be associated with poor physical function and mild cognitive impairment (MCI), its association with cognitive frailty (CF), a comorbidity of both, is unclear. This study aims to examine the association between CF and arterial stiffness in community-dwelling older adults.

Methods
A cross-sectional analysis of 511 community-dwelling older adults aged 65 years or older (mean age 73.6 ± 6.2 years, 63.6% women), who participated in a community cohort study (Tarumizu Study, 2019), was conducted. Poor physical function was defined as either slowness (walking speed &lt; 1.0 m/sec), or weakness (grip strength &lt; 28 kg for men and &lt; 18 kg for women). MCI was defined by the National Center for Geriatrics and Gerontology Functional Assessment Tool as a decline of at least 1.5 standard deviation from age- and education-adjusted baseline values in any one of the four cognitive domains (memory, attention, executive, and information processing). CF was defined as the combination of poor physical function and MCI. Arterial stiffness was measured using the Cardio-Ankle Vascular Index (CAVI), and the average of the left and right sides (mean CAVI) was used.

Results
Multinomial logistic regression analysis adjusted for covariates was performed with the four groups of robust, poor physical function, MCI, and CF as dependent variables and mean CAVI as an independent variable. Using the robust group as reference, the poor physical function and MCI groups showed no significant relationship with the mean CAVI. The mean CAVI was significantly higher in the CF group (odds ratio 1.62, 95% confidence interval 1.14–2.29).

Conclusion 
A significant association was found between CF and the higher CAVI (progression of arterial stiffness). Careful observation and control of CAVI, which is also an indicator of arterial stiffness, may be a potential target for preventive interventions for CF.
DOI: 10.6084/m9.figshare.19589332.v1
title: Supplementary.zip

description: Supplementaries
DOI: 10.15468/dl.nykts5
title: Occurrence Download

description: A dataset containing 5196 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Campaea margaritaria (Linnaeus, 1761)"
 ]
}

 The dataset includes 5196 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009583-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.13027655.v1
title: Research Data of JGR-A publication of "Asymmetrical Response of the East Asian Summer Monsoon to the Quadrennial Oscillation of Global Sea Surface Temperature Associated with the Tibetan Plateau Thermal Feedback"

description: This dataset is from the research paper entitled "Asymmetrical Response of the East Asian Summer Monsoon to the Quadrennial Oscillation of Global Sea Surface Temperature Associated with the Tibetan Plateau Thermal Feedback ", which published in Journal of Geophysical Research Atmospheres. <br>
DOI: 10.6084/m9.figshare.24749082.v1
title: Script and database

description: In this project, there are two files: 1)Prepare_data Maxent Andraca-Gómez et al., is the script used to perform the suitability analysis of <i>Cactoblastis cactorum,</i> using Maxent in R. The first part of the script is the correlation between the environmental variables and eliminates those that have correlation values greater than 0.8. Subsequently, the files are generated with the points used to create the suitability model in Maxent. Finally, the routine to run the Maxent suitability analysis in R. 2) Database_Arg, has the names and numbers of the collection points, a label for each individual, the coordinates of each individual, and ten nuclear microsatellite loci of the individuals of <i>Cactoblastis cactorum</i> collected in Argentina
DOI: 10.6084/m9.figshare.1570940.v6
title: Psychology data on the effects of study schedules on category-member classification: Dataset

description: Subjects (<em>N</em> = 100) studied a series of 6 natural exemplars (birds) belonging to 12 different categories (families). Birds were presented either: (1) blocked by category, (2) intermixed, (3) first blocked, then intermixed, or (4) first intermixed, then blocked. Following study, subjects judged the likelihood that they would be able to classify new birds belonging to studied families. Last, subjects were asked to classify 6 new birds belonging to studied families. The data were collected in the laboratory and are stored using Figshare in an Excel file. The data can inform future investigations of the way that individuals learn natural categories.
DOI: 10.6084/m9.figshare.24990969.v1
title: Metadig - Study Habits

description: Dataset and Results (open with Jamovi) about SRSI-SR test for Metadig project<br>This work has been financed by the “<i>Mejora del aprendizaje autorregulado al emplear de estrategias metacognitivas a través de una herramienta digital: análisis y comparativa de resultados”</i> [Improving self-regulated learning by employing metacognitive strategies through a digital tool: analysis and comparison of results] Research Project with reference JT-2022-03 granted in the UNIR Young Talents R&D Projects 2022 of the International University of La Rioja (UNIR).
DOI: 10.6084/m9.figshare.21280596.v1
title: Bike

description: <br> Data Dictionary <br> | Variable Name | Variable Values | | --- | ----------- | | **datetime** | hourly date + timestamp | | **season** | 1 = spring, 2 = summer, 3 = fall, 4 = winter | |**holiday** | whether the day is considered a holiday workingday - whether the day is neither a weekend nor holiday| |**weather** |1: Clear, Few clouds, Partly cloudy, Partly cloudy 2: Mist + Cloudy, Mist + Broken clouds, Mist + Few clouds, Mist 3: Light Snow, Light Rain + Thunderstorm + Scattered clouds, Light Rain + Scattered clouds 4: Heavy Rain + Ice Pallets + Thunderstorm + Mist, Snow + Fog| |**temp** |temperature in Celsius| |**atemp** | "feels like" temperature in Celsius| |**humidity** | relative humidity| |**windspeed**| wind speed| |**casual** | number of non-registered user rentals initiated| |**registered** |number of registered user rentals initiated| |**count** |number of total rentals|
DOI: 10.6084/m9.figshare.28609028.v2
title: DataNano

description: The database contains a description of ferrite nanoparticles: production methods, properties, as well as a link to the article. The data was entered manually and may contain typos, and outliers were not processed.
DOI: 10.6084/m9.figshare.7623077.v1
title: Additional file 2: of Single-cell analysis reveals congruence between kidney organoids and human fetal kidney

description: Organoid cluster markers. Organoid cluster markers and associated GO terms. (XLSX 3062 kb)
DOI: 10.17633/rd.brunel.28513478.v1
title: Langstone and Chichester Harbours Chemical Monitoring Raw Data

description: The file contains raw data and meta-data underlying a study into chemical contamination in Langstone and Chichester Harbours (UK) published in Environment International: 10.1016/j.envint.2025.109417<br>
DOI: 10.6084/m9.figshare.24769668.v2
title: Brain tissue Biogenic Amines 10.9.22.xlsx This work is licensed under CC BY-NC-ND 4.0. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/4.0/

description: GBM metabolomics
DOI: 10.6084/m9.figshare.25304590.v1
title: Supplementary Material for: Migration of a common bile duct stone into the main pancreatic duct due to catheter manipulation during endoscopic retrograde cholangiopancreatography

description: Introduction: We report the first case of a choledocholithiasis migrating into the main pancreatic duct (MPD) due to catheter manipulation during endoscopic retrograde cholangiopancreatography (ERCP).
Case Presentation: A 57-year-old woman complaining of vomiting was diagnosed with acute cholangitis and pancreatitis due to choledocholithiasis. During ERCP, the stone migrated from the papilla into the MPD due to the pushing motion of the catheter. However, the ERCP session was completed after biliary sphincterotomy without intervention in the MPD because the migration was not noticed. The migrated stone became apparent on computed tomography the following day. The second ERCP revealed the stone measuring 5 mm in the MPD. After pancreatic sphincterotomy, a pancreatic stent with was placed, which improved the obstructive pancreatitis.
Conclusion: Endoscopists performing ERCP should be aware of this rare but serious complication.
DOI: 10.6084/m9.figshare.4592170.v1
title: Data Journal Comunicar

description: Steps to reproduce<br>Selection of articles from Journal Comunicar, from 2011 to 2016 (August)<br>Citation data capture for these articles from Web of Science, Scopus, Mendeley and Google Scholar Citation, during 19 August to 16 September. <br>Altmetrics data for these articles from Altmetric.com, Score, Altmetric Attention Score, Tweets, Facebook Post, Mendeley, Google +, Blogs, news, peer review sites, CiteULike and Wikipedia, during 25 and 26 August.<br>Altmetrics data for these articles from Snowball during 11 September. <br>
DOI: 10.6084/m9.figshare.28692731.v1
title: <i>Litigation Profile: Zacharia Ali — Civil Records & Public Filings (2012–2024)</i>

description: This summary offers a documented overview of civil litigation and corporate entity activity associated with Zacharia Ali between 2012–2024. Based exclusively on public records, the dossier highlights court filings, procedural history, and business registration patterns involving shell structures across multiple jurisdictions. Designed as a resource for legal researchers, journalists, and compliance professionals, this archive contributes to the study of civil fraud, trust-based financial harm, and due diligence documentation. For citation and full reference: DOI 10.5281/zenodo.15105965
DOI: 10.6084/m9.figshare.27290622.v1
title: Supplementary Material for: Osimertinib for uncommon EGFR mutant Non-small cell lung carcinoma- A Case Report

description: Abstract 
Background: Non-small cell lung cancer (NSCLC) accounts for 84% of all lung cancers and continues to remain the leading cause of cancer-related mortality worldwide. The advent of gene targeted therapies has changed the landscape of NSCLC management. Osimertinib is a third-generation tyrosine-kinase inhibitor (TKI) that has activity against Exon 19, Exon 21 (L858R) mutations. It is also active against T790M mutation which is the most common resistant mechanism to earlier generation TKIs. Activity of Osimertinib against rare EGFR mutations is largely unknown. We report the case of a 64-year-old woman with metastatic NSCLC carrying an exceedingly rare deletion-insertion exon-19 EGFR mutation (p.E746_S752delinsV) who demonstrated sustained disease control with Osimertinib, achieving a PFS of 26 months. 
Case: A 64-year-old nonsmoker female presented with back pain for 1 month. MRI spine showed pathological fracture secondary to multiple lytic lesions. She underwent FDG PET/CT that showed large left lower lobe mass, bilateral pulmonary nodules, widespread osteolytic lesions. She underwent iliac lytic lesion biopsy that was consistent with Adenocarcinoma (TTF1 and CK7 positive). Tumor tissue NGS showed EGFR exon 19 mutation (DNA change: c.2237_2255delinsT, Amino acid change: p.E746_S752delinsV [Glu 746_Ser752delinsval]). She was started on Osimertinib and showed clinical response within 2 weeks of starting therapy. She was able to maintain a response for 26 months since starting treatment. 
Conclusion:
In summary, there is limited prospective data to guide therapy in patients with rare EGFR mutations. Prospective studies are required to evaluate the response to EGFR TKIs in patients with rare EGFR mutations in order to ensure patient safety and response to treatment in this patient population.
DOI: 10.6084/m9.figshare.16750384.v1
title: Healing Study Beres et al. - Part 1: Psychological and Immunological Changes after meeting a Chaplain coupled with Biblical Readings among Hospitalized Patients

description: Healing Study Beres et al.: A Clinical Study to evaluate Potential Psychological-, Neurological- and Immunological Effects of a Visit by a Chaplain coupled with Biblical Readings among Hospitalized Patients.<br><br>The authors pre-screened hospitalized participants to find those who were the most in need of an intervention by a chaplain. A passage from the Bible was read to the participants during a meeting with the chaplain at the bedside, or in the chapel of the hospital. No meeting occurred in the randomized control group, which was compiled in a way to get a group of participants with an approximatively similar pattern of diagnoses and treatment days than the intervention groups. <br>The pace of enrollment was deliberately slow in order to assure the authenticity of the visits ("slow science"). <br>Part 1: blood samples were taken 30 minutes prior, and 60 minutes after the meeting to measure White Blood Cell (WBC)-, lymphocyte counts, interferon gamma (IFN-γ)-, immunoglobulin M (IgM)-, immunoglobulin A (IgA)-, immunoglobulin G (IgG)-, and complement C3 levels. Raw psychological parameters were estimated with the usage of "Healing Questionnaires" designed for the Study, "before" and "afer" the visits, containing single-item rating scales in order to record assessements by the patients and the chaplain separately; PSS-14 Scale was also used in the groups at the chapel.<br>Part 2: a subgroup of the visited participants was subjected to functional Magnetic Resonance Imaging (fMRI), where they were played an audiotape of readings of the same passage from the Bible. fMRI raw data and the corresponding co-authors are published in a subsequent dataset corresponding to this study (https://doi.org/10.6084/m9.figshare.16751851).
DOI: 10.6084/m9.figshare.13397987.v2
title: Expression of 97 surface markers and RNA (transcriptome wide) in 13165 cells from a healthy young bone marrow donor

description: Seurat v3 object<b><br></b><b>ASSAYS</b>:AB: Antibody expression dataRNA: mRNA expression dataBOTH: Concatenated mRNA and antbody expression matrices<br><b>DIMENSIONALITY REDUCTION</b>MOFA: Multi-OMICS factor analysis to integrate AB and RNA data. MOFA served as input for clustering and further dimensionality reduction.MOFAUMAP: UMAP performed on MOFA dimensions. Display used in the manuscript.<br>MOFATSNE: UMAP performed on MOFA dimensions.
DOI: 10.6084/m9.figshare.1294744.v1
title: Taxi GPS data for Beijing ring roads

description: This dataset is for paper: Jingyuan Wang, Yu Mao, Jing Li, Zhang Xiong, Wen-Xu Wang. Predictability of road traffic and congestion in urban areas.
DOI: 10.6084/m9.figshare.25895383.v1
title: Supplementary Materials of Questionnaire Drug Infromation Services.docx

description: Files consist of:Questionnaire Translations and AdaptationsValidation Test of QuestionnaireReliability Test of QuestionnaireAdapted and Final Version of Drug Information Service Questionnaire
DOI: 10.6084/m9.figshare.4037550.v3
title: Normal uterine with vessel (Case 2)

description: Uterine body, mold, endometrium,vessel and bladder STL file.Uterine body, endometrium, vessel and bladder vtp file (3D Visualization)
DOI: 10.6084/m9.figshare.14405846.v1
title: Supplementary Material for: Differential DNA Methylation of the <b><i>IMMP2L</i></b> Gene in Families with Maternally Inherited 7q31.1 Microdeletions is Associated with Intellectual Disability and Developmental Delay

description: Most copy number variations (CNVs) in the human genome display incomplete penetrance with unknown underlying mechanisms. One such mechanism may be epigenetic modification, particularly DNA methylation. The <i>IMMP2L</i> gene is located in a critical region for autism susceptibility on chromosome 7q (AUTS1). The level of DNA methylation was assessed by bisulfite sequencing of 87 CpG sites in the <i>IMMP2L</i> gene in 3 families with maternally inherited 7q31.1 microdeletions affecting the <i>IMMP2L</i> gene alone. Bisulfite sequencing revealed comparable levels of DNA methylation in the probands, healthy siblings without microdeletions, and their fathers. In contrast, a reduced DNA methylation index and increased <i>IMMP2L</i> expression were observed in lymphocytes from the healthy mothers compared with the probands. A number of genes were upregulated in the healthy mothers compared to controls and downregulated in probands compared to mothers. These genes were enriched in components of the ribosome and electron transport chain, as well as oxidative phosphorylation and various degenerative conditions. Differential expression in probands and mothers with <i>IMMP2L</i> deletions relative to controls may be due to compensatory processes in healthy mothers with <i>IMMP2L</i> deletions and disturbances of these processes in probands with intellectual disability. The results suggest a possible partial compensation for <i>IMMP2L</i> gene haploinsufficiency in healthy mothers with the 7q31.1 microdeletion by reducing the DNA methylation level. Differential DNA methylation of intragenic CpG sites may affect the phenotypic manifestation of CNVs and explain the incomplete penetrance of chromosomal microdeletions.
DOI: 10.6084/m9.figshare.16913386.v1
title: Supplementary material for Sharma et al. (2021) - Diversity

description: This zipped directory contains two folders ("MatrixA" and "MatrixB"), corresponding to datasets Matrix A and Matrix B, respectively, of ref. [42].<br>Within each directory, a folder exists for each of the artificial topologies created using Matrix A or Matrix B of ref. [42]. Names of folders correspond to topological constraints trialed. Files included in each subfolder are the constraint trees and the submatrices created for every topological constraint.<br>