cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ayh9w8
title: Occurrence Download

description: A dataset containing 256509 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Biodiversity Research and Teaching Collections - TCWC Vertebrates"
 ]
}

 The dataset includes 256509 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0297957-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5s2da
title: Occurrence Download

description: A dataset containing 3777 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "OccurrenceStatus is Present",
 "TaxonKey is Cortaderia selloana (Schult. & Schult.f.) Asch. & Graebn."
 ]
}

 The dataset includes 3777 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003622-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j0jjnk
title: Occurrence Download

description: A dataset containing 9510 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus pinea L.",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-18.34 32.56,-18.34 46.06,9.21 46.06,9.21 32.56,-18.34 32.56))",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Observation"
 ]
 }
 ]
}

 The dataset includes 9510 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014454-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yj2ujj
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Harperocallis longiflora (Rusby) L.M.Campb. & Dorr"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0165171-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hayek8
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hygrophila sandwithii Bremek."
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0165170-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cbpny3
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aethionema capitatum Boiss. & Balansa"
 ]
}

 The dataset includes 64 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014455-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7g39p5
title: Occurrence Download

description: A dataset containing 790 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Tillandsia ionantha Planch."
 ]
}

 The dataset includes 790 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005882-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8k494d
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aeonium rubrolineatum Svent."
 ]
}

 The dataset includes 34 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017143-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.owb7ka
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Passeriformes",
 "Country is Mayotte"
 ]
}

 The dataset includes 29 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014455-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fd5qs7
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aeonium gorgoneum J.A.Schmidt"
 ]
}

 The dataset includes 55 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017132-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tz63x4
title: Occurrence Download

description: A dataset containing 1306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-102 24.8,-68.9 24.8,-68.9 49.7,-102 49.7,-102 24.8))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Crotalus Linnaeus, 1758",
 "Year 1990-2021"
 ]
}

 The dataset includes 1306 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0305698-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.65kem3
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aethionema retsina Phitos & Snogerup"
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014456-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tf5jxa
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geissanthus serrulatus (Willd. ex Roem. & Schult.) Mez"
 ]
}

 The dataset includes 171 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0165172-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hc8zjr
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-18 77.66823, -17.58418 77.66823, -17.58418 77.91304, -18 77.91304, -18 77.66823))"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042432-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybvac5
title: Occurrence Download

description: A dataset containing 392 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gnathostomulida"
 ]
}

 The dataset includes 392 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0313110-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wajf4w
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Sechium mexicanum Lira & M.Née",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 47 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014456-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6tzuab
title: Occurrence Download

description: A dataset listing the 10 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is French Guiana",
 "Geometry POLYGON((-52.51958 4.84122,-52.52121 4.82008,-52.51537 4.81717,-52.50365 4.83025,-52.51042 4.8371,-52.51275 4.84135,-52.51475 4.8371,-52.51958 4.84122))",
 "TaxonKey is Mantodea"
 ]
}

 The dataset's 10 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0165144-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ymjk5
title: Occurrence Download

description: A dataset containing 153189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spergula arvensis L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 153189 records from 925 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044608-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zd4bzx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tragopogon pterodes Pancic",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0141536-240321170329656/datasets/export for details.
DOI: 10.15468/dl.xgqn4p
title: Occurrence Download

description: A dataset containing 211 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chaenostoma uncinatum (Desr.) Kornhall"
 ]
}

 The dataset includes 211 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080711-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2eqvmo
title: Occurrence Download

description: A dataset containing 1358268 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ficedula hypoleuca (Pallas, 1764)"
 ]
}

 The dataset includes 1358268 records from 502 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021379-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4zs9hb
title: Occurrence Download

description: A dataset listing the 3 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Reesa vespulae (Milliron, 1939)"
 ]
}

 The dataset's 3 records were derived from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0175149-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1njzeb
title: Occurrence Download

description: A dataset containing 2860 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Kenya",
 "TaxonKey is Balearica regulorum (E.T.Bennett, 1834)"
 ]
}

 The dataset includes 2860 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021380-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.78kmzj
title: Occurrence Download

description: A dataset containing 1553872 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alopochen aegyptiaca (Linnaeus, 1766)"
 ]
}

 The dataset includes 1553872 records from 614 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0141360-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ndp7a
title: Occurrence Download

description: A dataset containing 155 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chlorophytum angulicaule (Baker) Kativu"
 ]
}

 The dataset includes 155 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080697-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t22nzv
title: Occurrence Download

description: A dataset containing 14467 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helianthus annuus L.",
 "Country is one of (United States of America, Canada)",
 "Year is greater than or equal to 1979"
 ]
}

 The dataset includes 14467 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006074-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.72n6zz
title: Occurrence Download

description: A dataset containing 3149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Pteronotus davyi Gray, 1838"
 ]
}

 The dataset includes 3149 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0175173-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qjmvda
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Macromitrium gymnostomum Sull. & Lesq.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 70 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021381-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5sz6mz
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chlorophytum applanatum Nordal & Thulin"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080724-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rv35yn
title: Occurrence Download

description: A dataset containing 2860 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Kenya",
 "TaxonKey is Balearica regulorum (E.T.Bennett, 1834)"
 ]
}

 The dataset includes 2860 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021381-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5evdqm
title: Occurrence Download

description: A dataset containing 4409 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xanthorhoe annotinata (Zetterstedt, 1839)"
 ]
}

 The dataset includes 4409 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0201886-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wbcz9v
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Ailuronyx tachyscopaeus Gerlach & Canning, 1996"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080743-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4c1pin
title: Occurrence Download

description: A dataset containing 645 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Wisteria floribunda (Willd.) DC."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 645 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021382-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d2qnrg
title: Occurrence Download

description: A dataset containing 1564 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex oedipostyla Duval-Jouve"
 ]
}

 The dataset includes 1564 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080750-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dnh3vl
title: Occurrence Download

description: A dataset containing 113088 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is France",
 "Country is Spain"
 ]
 },
 "TaxonKey is Quercus pubescens Willd."
 ]
}

 The dataset includes 113088 records from 226 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013285-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vb4ufv
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Crocodylus rhombifer (Cuvier, 1807)"
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023290-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.duo8xt
title: Occurrence Download

description: A dataset containing 179 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Reconstruction of surface water temperature of sediment core GIK12379-1, Cape Barbas, North-West Africa (Appendix Tab. 4)"
 ]
}

 The dataset includes 179 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005738-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y5m9en
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cousinia sakawensis Boiss. & Hausskn."
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150049-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdnphn
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tillandsia rhodocephala Ehlers & Koide"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197317-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zh7tht
title: Occurrence Download

description: A dataset containing 207 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lagostomus maximus (Desmarest, 1817)"
 ]
}

 The dataset includes 207 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023286-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lmaaek
title: Occurrence Download

description: A dataset containing 594560 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Holcus lanatus L."
 ]
}

 The dataset includes 594560 records from 736 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005738-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rddcns
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cousinia rechingerorum Bornm."
 ]
}

 The dataset includes 9 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150021-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/34td4ds2r9.1
title: Branching topology of the human embryo transcriptome revealed by entropy sort feature weighting

description: This repository stores the data and code used to generate the human pre-implantation embryo results in our publication titled, "Branching topology of the human embryo transcriptome revealed by entropy sort feature weighting". 

The data is subset into two sub folders whose recommended order of usage is as follows:

1. Human_Embryo_Analysis - Contains the code used to generate all early human embryo scRNA-seq results in our publication. Python files with the the suffix, "_Workflow.py" contain the code required to reproduce results and plots.
2. Synthetic_Data - Contains the code used to generate all Dyngen synthetic scRNA-seq dataset results in our publication. Python files with the the suffix, "_Workflow.py" contain the code required to reproduce results and plots.

We would like to highlight that we have provided exact copies of the early human embryo scRNA-seq counts matrices used in the paper to make our work as accessible as possible. However, we recommend that researchers who wish to use the datasets we used in their own work start from the source data (e.g. the Gene Expression Omnibus repositories) to maintain their integrity. Details of each dataset used for this work are provided in the experimental procedures section of our manuscript.
DOI: 10.15468/dl.4a8d4h
title: Occurrence Download

description: A dataset containing 26638009 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "PublishingCountry is Australia"
 ]
}

 The dataset includes 26638009 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023296-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.