cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.sebek9
title: Occurrence Download

description: A dataset containing 2419 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vicia melanops Sm."
 ]
}

 The dataset includes 2419 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030417-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dt77sp
title: Occurrence Download

description: A dataset listing the 52437 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Oceania",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset's 52437 records were derived from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045587-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y8h3v5
title: Occurrence Download

description: A dataset containing 567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Canada",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-123.1844 49.68272,-123.06691 49.68198,-123.06691 49.77979,-123.1828 49.77978,-123.1844 49.68272))",
 "HasGeospatialIssue is false",
 "MediaType is Image",
 "Month is one of (April, May, June, July, August, March)",
 "TaxonKey is Plantae",
 "Year 2022-2022"
 ]
}

 The dataset includes 567 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026082-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.827k84
title: Occurrence Download

description: A dataset containing 3362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Nyctiprogne leucopyga",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 3362 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077878-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z92ac7
title: Occurrence Download

description: A dataset containing 1539 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Eurycea lucifuga Rafinesque, 1822",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1539 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045591-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.75r63k
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-76.52042 0.281,-76.43903 0.72867,-76.23554 1.05425,-76.3948 1.73639,-76.49576 2.10362,-76.57749 2.7302,-76.48782 3.16806,-76.523 3.52024,-76.35954 4.36476,-76.25584 5.65061,-76.07055 6.32229,-75.8891 6.90396,-75.6269 7.69705,-75.89642 7.9608,-76.05987 8.39669,-76.11436 8.39669,-76.11436 8.39669,-76.1416 8.61463,-76.22333 8.7236,-76.26691 8.75404,-76.3323 8.80533,-76.3621 8.85483,-76.52196 8.89372,-76.72391 8.94954,-77.09018 8.86815,-77.58547 8.69636,-77.45646 8.0542,-77.94483 6.95537,-77.74134 5.85654,-77.6455 3.84405,-79.17414 1.45845,-77.90413 0.72867,-76.52042 0.281))",
 "TaxonKey is Cavanillesia platanifolia (Humb. & Bonpl.) Kunth"
 ]
}

 The dataset includes 28 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026064-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r3atmc
title: Occurrence Download

description: A dataset containing 96784 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Ocyceros birostris",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 96784 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077928-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hqhf9t
title: Occurrence Download

description: A dataset containing 2115 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Inventaire des coléoptères saproxyliques de France métropolitaine - Données de la collection de Hubert Piguet - Famille des Elateridae"
 ]
}

 The dataset includes 2115 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032545-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2b5y9
title: Occurrence Download

description: A dataset containing 66964 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "MediaType is Image",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is one of (Coriandrum sativum L., Mentha L., Lactuca sativa L., Fragaria L., Cucurbita pepo L., Solanum lycopersicum L., Anethum graveolens L., Origanum vulgare L., Ocimum basilicum L., Capsicum annuum L.)"
 ]
}

 The dataset includes 66964 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026099-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69gtwg
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllolobium flavovirens (K.T.Fu) M.L.Zhang & Podlech"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077920-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m83x8q
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-5.69734 36.90030,-5.09799 36.90030,-5.09799 37.16372,-5.69734 37.16372,-5.69734 36.90030))",
 "HasCoordinate is true",
 "TaxonKey is Phillyrea latifolia L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 44 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077203-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4bxm8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Oriolus consanguineus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090932-230530130749713/datasets/export for details.
DOI: 10.15468/dl.pprn8a
title: Occurrence Download

description: A dataset containing 60653 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is UK Roadkill Records"
 ]
}

 The dataset includes 60653 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026065-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cmrdeb
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is CardObs : Observations naturalistes issues de l'outil CardObs-Données naturalistes de REYJOL Yorick"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032566-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.enqjva
title: Occurrence Download

description: A dataset containing 173351 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "GadmGid is one of (COL)",
 "TaxonKey is one of (Reptilia)"
 ]
 }
 ]
}

 The dataset includes 173351 records from 400 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026091-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xkq8ek
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Ochthoeca thoracica",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 20 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077923-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.42z8t5
title: Occurrence Download

description: A dataset containing 190 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Denmark",
 "TaxonKey is Nyctereutes procyonoides (Gray, 1834)"
 ]
}

 The dataset includes 190 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053787-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.va2bj6
title: Occurrence Download

description: A dataset containing 30628 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Mammalia)",
 "StateProvince ~santander"
 ]
 }
 ]
}

 The dataset includes 30628 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026101-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8nahtz
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Shoshonea pulvinata Evert & Constance"
 ]
}

 The dataset includes 124 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127415-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjwfqm
title: Occurrence Download

description: A dataset listing the 175453 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset's 175453 records were derived from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045569-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gms5k
title: Occurrence Download

description: A dataset containing 1331 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-76.52042 0.281,-76.43903 0.72867,-76.23554 1.05425,-76.3948 1.73639,-76.49576 2.10362,-76.57749 2.7302,-76.48782 3.16806,-76.523 3.52024,-76.35954 4.36476,-76.25584 5.65061,-76.07055 6.32229,-75.8891 6.90396,-75.6269 7.69705,-75.89642 7.9608,-76.05987 8.39669,-76.11436 8.39669,-76.11436 8.39669,-76.1416 8.61463,-76.22333 8.7236,-76.26691 8.75404,-76.3323 8.80533,-76.3621 8.85483,-76.52196 8.89372,-76.72391 8.94954,-77.09018 8.86815,-77.58547 8.69636,-77.45646 8.0542,-77.94483 6.95537,-77.74134 5.85654,-77.6455 3.84405,-79.17414 1.45845,-77.90413 0.72867,-76.52042 0.281))",
 "TaxonKey is Socratea exorrhiza (Mart.) H.Wendl."
 ]
}

 The dataset includes 1331 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026129-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dqtwnd
title: Occurrence Download

description: A dataset containing 1839 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Ochetorhynchus ruficaudus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 1839 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077909-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.22ykmm
title: Occurrence Download

description: A dataset containing 1256 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Entomophthora Fresen."
 ]
}

 The dataset includes 1256 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076522-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gn6eac
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllocephalum ritchiei (Hook.fil.) Narayana"
 ]
}

 The dataset includes 17 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077889-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qfye87
title: Occurrence Download

description: A dataset containing 602 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "DatasetKey is one of (EOD – eBird Observation Dataset, Field Museum of Natural History (Zoology) Bird Collection, iNaturalist Research-grade Observations, Xeno-canto - Bird sounds from around the world, Vertebrate Zoology Division - Ornithology, Yale Peabody Museum, Observation.org, Nature data from around the World)",
 "GadmGid is VEN",
 "OccurrenceStatus is Present",
 "TaxonKey is Amazona barbadensis (Gmelin, 1788)"
 ]
}

 The dataset includes 602 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026127-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbkjaz
title: Occurrence Download

description: A dataset listing the 78 species recorded in GBIF matching the query:
{
 "and" : [
 "Year 1900-2020",
 "HasCoordinate is true",
 "TaxonKey is Canis Linnaeus, 1758",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 78 records were derived from 314 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078941-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.92dew3
title: Occurrence Download

description: A dataset containing 250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amphithrax aculeatus (Herbst, 1790)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 250 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096357-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12635263
title: Seq2scFv: a toolkit for the comprehensive analysis of display libraries from long-read sequencing platforms

description: Annotation of full-length scFvs sequenced with PacBio using Seq2scFv (https://github.com/ngs-ai-org/seq2scfv). 

Raw files were obtained from publicly available dataset generated by Nannini and colleagues in "Combining phage display with SMRTbell next-generation sequencing for the rapid discovery of functional scFv fragments." MAbs. Vol. 13. No. 1. Taylor & Francis, 2021.

The results of the annotation are organized in directories. These correspond to the different steps of the tutorial presented in the Seq2scFv repository. 

├── 1.Preprocessed├── 2.Catalogued├── 3.vscan├── 4.scFv_split├── 5.Linkers├── 6.Flags├── 7.Counts└── focus_libs.txt
DOI: 10.5281/zenodo.12635262
title: Seq2scFv: a toolkit for the comprehensive analysis of display libraries from long-read sequencing platforms

description: Annotation of full-length scFvs sequenced with PacBio using Seq2scFv (https://github.com/ngs-ai-org/seq2scfv). 

Raw files were obtained from publicly available dataset generated by Nannini and colleagues in "Combining phage display with SMRTbell next-generation sequencing for the rapid discovery of functional scFv fragments." MAbs. Vol. 13. No. 1. Taylor & Francis, 2021.

The results of the annotation are organized in directories. These correspond to the different steps of the tutorial presented in the Seq2scFv repository. 

├── 1.Preprocessed├── 2.Catalogued├── 3.vscan├── 4.scFv_split├── 5.Linkers├── 6.Flags├── 7.Counts└── focus_libs.txt

This entry also contains the code provided in the GitHub repository.
DOI: 10.5281/zenodo.13747528
title: Seq2scFv: a toolkit for the comprehensive analysis of display libraries from long-read sequencing platforms

description: Annotation of full-length scFvs sequenced with PacBio using Seq2scFv (https://github.com/ngs-ai-org/seq2scfv). 

Raw files were obtained from publicly available dataset generated by Nannini and colleagues in "Combining phage display with SMRTbell next-generation sequencing for the rapid discovery of functional scFv fragments." MAbs. Vol. 13. No. 1. Taylor & Francis, 2021.

The results of the annotation are organized in directories. These correspond to the different steps of the tutorial presented in the Seq2scFv repository. 

├── 1.Preprocessed├── 2.Catalogued├── 3.vscan├── 4.scFv_split├── 5.Linkers├── 6.Flags├── 7.Counts└── focus_libs.txt

This entry also contains the code provided in the GitHub repository.
DOI: 10.15468/dl.3rq9xx
title: Occurrence Download

description: A dataset containing 826476 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "DatasetKey is one of (Victorian Biodiversity Atlas, iNaturalist Research-grade Observations)",
 "GadmGid is AUS.10_1",
 "Geometry POLYGON((144.594 -38.184,145.226 -38.184,145.226 -37.653,144.594 -37.653,144.594 -38.184))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 826476 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011551-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60893/figshare.apl.26828035
title: Supplementary Material

description: Supplementary Material
DOI: 10.60893/figshare.apl.26828035.v1
title: Supplementary Material

description: Supplementary Material
DOI: 10.15468/dl.rqt9jv
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Observations fortuites de mammifères terrestres dans Faune-Réunion - Faune-Réunion - export mammifères terrestres 13/12/2019"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011561-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r87nsj
title: Occurrence Download

description: A dataset containing 139 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hyperoodon planifrons Flower, 1882",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 139 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011563-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60893/figshare.apl.26928016.v1
title: Supplemental 1

description: We moved some parts of the paper into the supplementary document
DOI: 10.60893/figshare.apl.26928016
title: Supplemental 1

description: We moved some parts of the paper into the supplementary document
DOI: 10.60893/figshare.apl.26928022
title: Supporting information

description: some supplementary data ralated the manuscrip
DOI: 10.60893/figshare.apl.26928022.v1
title: Supporting information

description: some supplementary data ralated the manuscrip
DOI: 10.15468/dl.5wva8a
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Indopacetus pacificus (Longman, 1926)",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 72 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011564-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.