cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0193827.10fu
title: SH0193827.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193828.10fu
title: SH0193828.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193829.10fu
title: SH0193829.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193830.10fu
title: SH0193830.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193831.10fu
title: SH0193831.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193832.10fu
title: SH0193832.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193833.10fu
title: SH0193833.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193834.10fu
title: SH0193834.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193835.10fu
title: SH0193835.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193836.10fu
title: SH0193836.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.24ztnc
title: Occurrence Download

description: A dataset containing 49262 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is SDNHM Birds Collection"
 ]
}

 The dataset includes 49262 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069826-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24143797
title: Additional file 1 of 2-year results of middle-aged patients with two-compartment cartilage lesions in one knee treated with two patient specific metal implants

description: Additional file 1.
DOI: 10.6084/m9.figshare.24143797.v1
title: Additional file 1 of 2-year results of middle-aged patients with two-compartment cartilage lesions in one knee treated with two patient specific metal implants

description: Additional file 1.
DOI: 10.15468/dl.39peh2
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Viet Nam)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron emarginatum Hemsl. & E.H.Wilson"
 ]
}

 The dataset includes 69 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069827-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a9gz8e
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.356646 -33.862689, 147.356646 -33.864935, 147.361138 -33.864935, 147.361138 -33.869427, 147.363384 -33.869427, 147.363384 -33.862689, 147.356646 -33.862689))"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069828-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13235084
title: Intensified, Kilogram-Scaled, and Environment-Friendly: Chemoenzymatic Synthesis of Bio-Based Acylated Hydroxystyrenes

description: Lignin-derived styrene derivatives are versatile building blocks for the manufacture of bio-based polymers. As shown previously, phenol-protected hydroxystyrenes are accessible under industrially-sound conditions (>100 g/L, >95% yield) by subjecting biogenic phenolic acids to enzymatic decarboxylation and base-catalyzed acylation in non-aqueous media (wet cyclopentyl methyl ether, CPME). Herein, we demonstrate the production of 1 kg of 4-acetoxy-3-methoxystyrene in a 10 L reactor and present practical adjustments to the up- and downstream processing that warrant a straightforward process and high isolated yields. Additionally, an environmental assessment is conducted, starting with a thorough E factor analysis to identify the sources that contribute most to the environmental burden (solvent and downstream processing). Also, the total CO2 production of the process is studied, including contributions from energy use and the treatment of generated wastes. The energy impact is evaluated through thermodynamic analysis, and the environmental footprint contributions by wastes – organic and aqueous fractions – are assessed based on CO2 emissions from solvent incineration and wastewater treatment, respectively. Overall, the holistic assessment of the process, its optimization, scale-up, product isolation, and environmental analysis indicate the feasibility of multi-step chemoenzymatic reactions to deliver high volume, low-value chemicals from biorefineries.
DOI: 10.5281/zenodo.13235085
title: Intensified, Kilogram-Scaled, and Environment-Friendly: Chemoenzymatic Synthesis of Bio-Based Acylated Hydroxystyrenes

description: Lignin-derived styrene derivatives are versatile building blocks for the manufacture of bio-based polymers. As shown previously, phenol-protected hydroxystyrenes are accessible under industrially-sound conditions (>100 g/L, >95% yield) by subjecting biogenic phenolic acids to enzymatic decarboxylation and base-catalyzed acylation in non-aqueous media (wet cyclopentyl methyl ether, CPME). Herein, we demonstrate the production of 1 kg of 4-acetoxy-3-methoxystyrene in a 10 L reactor and present practical adjustments to the up- and downstream processing that warrant a straightforward process and high isolated yields. Additionally, an environmental assessment is conducted, starting with a thorough E factor analysis to identify the sources that contribute most to the environmental burden (solvent and downstream processing). Also, the total CO2 production of the process is studied, including contributions from energy use and the treatment of generated wastes. The energy impact is evaluated through thermodynamic analysis, and the environmental footprint contributions by wastes – organic and aqueous fractions – are assessed based on CO2 emissions from solvent incineration and wastewater treatment, respectively. Overall, the holistic assessment of the process, its optimization, scale-up, product isolation, and environmental analysis indicate the feasibility of multi-step chemoenzymatic reactions to deliver high volume, low-value chemicals from biorefineries.
DOI: 10.6084/m9.figshare.26627839
title: Additional file 5 of Genetic assessment of pathogenic germline alterations in lysosomal genes among Asian patients with pancreatic ductal adenocarcinoma

description: Additional file 5: Table S2. List of antibodies and drugs used in the study
DOI: 10.15468/dl.a2ucjb
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron englerianum Koord."
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069830-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.854eb8
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.162888 -33.862689, 148.162888 -33.864935, 148.174117 -33.864935, 148.174117 -33.862689, 148.162888 -33.862689))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069831-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sb7w5c
title: Occurrence Download

description: A dataset containing 12722 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Human Observation, Specimen, Observation, Material sample)",
 "TaxonKey is one of (Pontederia crassipes Mart., Pontederia crassipes Roem. & Schult.)",
 "Year 2015-2024"
 ]
}

 The dataset includes 12722 records from 202 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069829-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24144195.v1
title: Additional file 1 of Lifting of the 1,000 wheat exome project SNPs from Triticum aestivum cv. Chinese Spring assembly RefSeq v1.0 to RefSeq v2.1

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24144195
title: Additional file 1 of Lifting of the 1,000 wheat exome project SNPs from Triticum aestivum cv. Chinese Spring assembly RefSeq v1.0 to RefSeq v2.1

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26628295.v1
title: Additional file 1 of Evaluation of different diagnostic methods for spinal tuberculosis infection

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24143761
title: Additional file 1 of The pear genomics database (PGDB): a comprehensive multi-omics research platform for Pyrus spp.

description: Table S1: Profile of the 8 pear genomes available in the PGDB
DOI: 10.6084/m9.figshare.24143761.v1
title: Additional file 1 of The pear genomics database (PGDB): a comprehensive multi-omics research platform for Pyrus spp.

description: Table S1: Profile of the 8 pear genomes available in the PGDB
DOI: 10.6084/m9.figshare.24143764
title: Additional file 2 of The pear genomics database (PGDB): a comprehensive multi-omics research platform for Pyrus spp.

description: Table S2: Functional annotations of pear genomes, including GO terms, KEGG pathways and InterPro terms
DOI: 10.6084/m9.figshare.24143764.v1
title: Additional file 2 of The pear genomics database (PGDB): a comprehensive multi-omics research platform for Pyrus spp.

description: Table S2: Functional annotations of pear genomes, including GO terms, KEGG pathways and InterPro terms
DOI: 10.6084/m9.figshare.24143773
title: Additional file 3 of The pear genomics database (PGDB): a comprehensive multi-omics research platform for Pyrus spp.

description: Table S3: Transcription factor and regulator gene families in 9 pear genomes
DOI: 10.6084/m9.figshare.24143773.v1
title: Additional file 3 of The pear genomics database (PGDB): a comprehensive multi-omics research platform for Pyrus spp.

description: Table S3: Transcription factor and regulator gene families in 9 pear genomes
DOI: 10.6084/m9.figshare.24151211
title: Additional file 1 of Identification of Candidate Genes that Affect the Contents of 17 Amino Acids in the Rice Grain Using a Genome-Wide Haplotype Association Study

description: Additional file 1: Table S1 The origins and group assignments of the 164 rice accessions used in this study. Table S2 The distribution of the 1,123,603 high-quality SNPs on the 12 rice chromosomes used in the genome-wide haplotype association study. Table S3 The 261 gene-trait associations detected by genome-wide haplotype association study and their key natural variations. Table S4 The genes associated with multipe amino acids detected by genome-wide haplotype association study
DOI: 10.6084/m9.figshare.24151211.v1
title: Additional file 1 of Identification of Candidate Genes that Affect the Contents of 17 Amino Acids in the Rice Grain Using a Genome-Wide Haplotype Association Study

description: Additional file 1: Table S1 The origins and group assignments of the 164 rice accessions used in this study. Table S2 The distribution of the 1,123,603 high-quality SNPs on the 12 rice chromosomes used in the genome-wide haplotype association study. Table S3 The 261 gene-trait associations detected by genome-wide haplotype association study and their key natural variations. Table S4 The genes associated with multipe amino acids detected by genome-wide haplotype association study
DOI: 10.6084/m9.figshare.26627875
title: Additional file 8 of Association between gut microbiota and influenza: a bidirectional two-sample mendelian randomization study

description: Supplementary Material 8
DOI: 10.6084/m9.figshare.24151311
title: Additional file 1 of Identification and verification of plasma protein biomarkers that accurately identify an ectopic pregnancy

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24151311.v1
title: Additional file 1 of Identification and verification of plasma protein biomarkers that accurately identify an ectopic pregnancy

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24151314
title: Additional file 2 of Identification and verification of plasma protein biomarkers that accurately identify an ectopic pregnancy

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.24151314.v1
title: Additional file 2 of Identification and verification of plasma protein biomarkers that accurately identify an ectopic pregnancy

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.24151317
title: Additional file 3 of Identification and verification of plasma protein biomarkers that accurately identify an ectopic pregnancy

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26627842.v1
title: Additional file 6 of Genetic assessment of pathogenic germline alterations in lysosomal genes among Asian patients with pancreatic ductal adenocarcinoma

description: Additional file 6: Table S3. Pathogenic variants identified in the Korean PDAC and normal control.
DOI: 10.6084/m9.figshare.26627863.v1
title: Additional file 4 of Association between gut microbiota and influenza: a bidirectional two-sample mendelian randomization study

description: Supplementary Material 4