cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17106462
title: CLAMPD-1905-Dataset

description: CLAMPD-1905 is the first comprehensive cross-language dataset for malicious package detection research, offering unified feature representations and full reproducibility across PyPI and npm ecosystems. This dataset enables standardized benchmarking of malware detection tools across diverse software supply chain ecosystems.

Built on curated packages from MalwareBench, CLAMPD-1905 includes 23,764 balanced software packages (11,882 benign and 11,882 malicious) from PyPI and npm, each represented as a 1905-dimensional multimodal feature vector. These vectors combine static metadata (9 features), dependency graph embeddings (128 dimensions), and API behavioral features (1768 dimensions) extracted from over one million source files.

This unified representation eliminates ecosystem-specific preprocessing requirements, facilitates reproducible experiments, and supports research on cross-ecosystem supply chain security threats.

Key Features:





Cross-Ecosystem Coverage: Unified feature space spanning PyPI and npm




Multimodal Feature Integration: Metadata, HAN dependency graph embeddings, and BERT API usage features




Perfect Class Balance: 23,764 packages (11,882 benign, 11,882 malicious)




Advanced Feature Engineering: Pre-computed 1905-dimensional feature vectors for direct model training




Research Ready: Standardized format for ML model evaluation and reproducibility




Comprehensive Representation: Captures structural, semantic, and behavioral characteristics
DOI: 10.15468/dl.rc5aq8
title: Occurrence Download

description: A dataset containing 4832 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Argentina, Falkland Islands (Malvinas))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Allenrolfea, Argemone, Argythamnia, Atamisquea, Atamisquea, Cereus, Chloris, Cyclospermum, Cyclospermum, Gallardoa, Grahamia, Grahamia, Oreobolus, Verbesina, Empetrum, Hippuris)"
 ]
}

 The dataset includes 4832 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056355-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ufuksr
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvinia natans",
 "Country is Indonesia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056351-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/dans-zar-hsky
title: DOMT: Plangebied Meesterstraat, gemeente Doetinchem; archeologisch vooronderzoek: een bureau- en inventariserend veldonderzoek (karterend booronderzoek) Plangebied Meesterstraat, gemeente Doetinchem; archeologisch vooronderzoek: een bureau- en inventariserend veldonderzoek (karterend booronderzoek)

description: &lt;p&gt;&lt;p&gt;In opdracht van Tara Bouw heeft RAAP Archeologisch Adviesbureau in oktober 2014 een bureau- en inventariserend veldonderzoek uitgevoerd in verband met de geplande bouw van een verzorgingscentrum aan de Meesterstraat te Doetinchem. Dit onderzoek diende te worden uitgevoerd omdat realisatie van de plannen zou kunnen leiden tot aantasting of vernietiging van mogelijk aanwezige archeologische resten. Doel van het bureauonderzoek was het verwerven van informatie over bekende en verwachte archeologische waarden teneinde een gespecificeerde verwachting op te stellen. Doel van het veldonderzoek was het toetsen van die gespecificeerde archeologische verwachting en, indien mogelijk, een eerste indruk geven van de aard, omvang, datering, kwaliteit (gaafheid en conservering) en diepteligging van eventueel aangetroffen archeologische resten.&lt;br&gt;&lt;p&gt;Op basis van het bureauonderzoek kan aan het plangebied een hoge archeologische verwachting voor alle perioden tot de Nieuwe tijd worden toegekend. Het gaat hierbij deels om resten van jagers/verzamelaars uit het Paleo- tot en met Neolithicum, boerenerven uit de periode Bronstijd tot en met de Middeleeuwen, houtskoolmeilers uit de Middeleeuwen en (ontginnings)greppels uit de Late Middeleeuwen en Nieuwe tijd.&lt;br&gt;&lt;p&gt;Tijdens het veldonderzoek zijn vier boringen geplaatst. Het verwachte rivierduin met plaggendek is daadwerkelijk aangetroffen. Alhoewel de top van de archeologische laag grotendeels verstoord is, is wel een vindplaats aangetroffen. Deze wordt gedateerd in de Late Middeleeuwen. Op basis hiervan wordt geadviseerd om vervolgonderzoek uit te voeren in de vorm van een proefsleuvenonderzoek.&lt;br&gt;Een archeologisch proefsleuvenonderzoek (IVO-P) behoort conform de KNA versie 3.3 plaats te vinden op basis van een Programma van Eisen (PvE). Dit PvE dient voor aanvang van het onderzoek te worden opgesteld door een senior-archeoloog en te worden goedgekeurd door het bevoegd gezag.&lt;/p&gt;
DOI: 10.6084/m9.figshare.30113239
title: BPP_input_results.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files and result files from the BPP analysis.
DOI: 10.6084/m9.figshare.30113245.v1
title: PartitionFinder2_input_results.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files, configuration files and results of the PartitionFinder2 analyses.
DOI: 10.6084/m9.figshare.30113281
title: Strict_clock_rates_input_results_FigS1A.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains input files and results from the strict clock analysis associated with Figure S1A.
DOI: 10.6084/m9.figshare.30113281.v1
title: Strict_clock_rates_input_results_FigS1A.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains input files and results from the strict clock analysis associated with Figure S1A.
DOI: 10.6084/m9.figshare.30113239.v1
title: BPP_input_results.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files and result files from the BPP analysis.
DOI: 10.6084/m9.figshare.30113245
title: PartitionFinder2_input_results.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files, configuration files and results of the PartitionFinder2 analyses.
DOI: 10.6084/m9.figshare.30113248
title: RAxML-ng_input_results.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files and results from the RAxML-ng analysis.
DOI: 10.6084/m9.figshare.30113260
title: Relaxed_clock_rates_input_results_FigS1B.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files and results from the relaxed clock analysis associated with Figure S1B.
DOI: 10.6084/m9.figshare.30113260.v1
title: Relaxed_clock_rates_input_results_FigS1B.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files and results from the relaxed clock analysis associated with Figure S1B.
DOI: 10.6084/m9.figshare.30113269
title: BioGeoBEARS_input_results.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files, R script and results of the BioGeoBEARS analysis.
DOI: 10.6084/m9.figshare.30113269.v1
title: BioGeoBEARS_input_results.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files, R script and results of the BioGeoBEARS analysis.
DOI: 10.17026/dans-zar-txrm
title: A-15.0182: Goes, Kleine Kade 29 en 31 Goes, Kleine Kade 29 en 31

description: &lt;p&gt;In opdracht van Architecten Alliantie BV Goes heeft onderzoeksbureau BAAC een Opgraving, variant Archeologische Begeleiding uitgevoerd in het plangebied De Kleine Kade 29 – 31, gelegen in de historische stadskern van Goes. De aanleiding voor het onderzoek is de voorgenomen aanbouw (locatie 1) en aanleg van een zwembad (locatie 2) in het plangebied met een hoge archeologische verwachting.&lt;br&gt;De begeleide werkzaamheden omvatten: • het uitgraven van de uitbouw en funderingssleuven (locatie 1); • het voorgraven voor en slaan van damwanden voor de aanleg van het zwembad (locatie 2); • het uitgraven van het zwembad (locatie 2); • graafwerkzaamheden voor de aanleg van leidingen in de tuin (locatie 2).&lt;br&gt;Ter locatie van de aanbouw (locatie 1) achter het pand aan de Kleine Kade zijn enkele muurresten aangetroffen die verband houden met een oude (uit)bouwfase.&lt;br&gt;Op de tweede locatie, waar een zwembad is gerealiseerd, is een laag aangetroffen met veel vondsten (aardewerk, glas, metaal, leer) uit de laat 15e, 16e en begin 17e eeuw. In deze laag zijn ook enkele aangepunte houten palen gevonden. Uit deze palen is geen specifieke constructie te herleiden. Tussen de vondstlaag en het maaiveld zijn tevens ophogingslagen aangetroffen. Hierin zijn slechts twee andere sporen aangetroffen: een waterput en een poer.&lt;br&gt;De archeologische resultaten van de kleinschalige opgravingsputten zijn door de slechte zichtbaarheid moeilijk in ruimtelijke context te plaatsen. De vele vondsten, de historische locatie en de sporen tonen echter aan dat archeologie uit de 15e, 16e en 17e eeuw sterk is vertegenwoordigd. Het niet onderzochte deel van het plangebied en de omringende percelen kunnen de hoge archeologische verwachting behouden. De oude Spuidijk biedt een gebied met een hoge archeologische potentie. Bij toekomstige bodemingrepen zullen de gestelde onderzoeksvragen in combinatie met huidig en voorgaande onderzoeken beter beantwoord kunnen worden.&lt;/p&gt;
DOI: 10.6084/m9.figshare.30113248.v1
title: RAxML-ng_input_results.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files and results from the RAxML-ng analysis.
DOI: 10.6084/m9.figshare.30113275.v1
title: MrBayes_input_result.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files and results for the Bayesian Inference analysis with MrBayes.
DOI: 10.6084/m9.figshare.30113278
title: Strict_clock_rates_root_Fig2.zip

description: This dataset was assembled to investigate the evolutionary history of <i>Hipparchia</i> butterflies in the Canary Islands, an archipelago known for its high levels of endemism and complex colonization dynamics. <i>Hipparchia</i> species occur on five of the seven main islands, yet their origin, taxonomic boundaries, and diversification patterns have remained unresolved. To address these questions, we compiled molecular and geographic data representing all insular taxa along with their closest mainland relatives. The dataset includes newly generated sequences for three genetic markers (COIb, GAPDH, and wingless), as well as COIa sequences retrieved from public databases. All sequences used to build the input datasets for the analyses are available in GenBank. In addition to the sequence alignments, this data package includes the input files and corresponding results from the phylogenetic, dating, species delimitation, and biogeographic analyses described in the associated manuscript.This particular .zip file contains the input files and results from the strict clock analysis associated with Figure 2.