cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7g6ca9
title: Occurrence Download

description: A dataset containing 345 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Chrysanthemum ×morifolium Ramat.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 345 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017943-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.purj6p
title: Occurrence Download

description: A dataset containing 1626 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "MediaType is Image",
 "TaxonKey is Lepidium didymum L."
 ]
}

 The dataset includes 1626 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0181766-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kbjwch
title: Occurrence Download

description: A dataset containing 1210 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Material sample"
 ]
 },
 "Country is China",
 "TaxonKey is Ulmus L."
 ]
}

 The dataset includes 1210 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075225-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5szcu8
title: Occurrence Download

description: A dataset containing 961 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Achyranthes bidentata Blume",
 "Year 1980-2021"
 ]
}

 The dataset includes 961 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0302198-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hz963z
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Registros de geckos en Colombia asociado al proyecto: The small world of Lepidoblepharis"
 ]
}

 The dataset includes 28 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056608-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v99dbu
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aconitum brachypodum Diels"
 ]
}

 The dataset includes 91 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0181790-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c5a7e6
title: Occurrence Download

description: A dataset containing 571 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Vampyriscus bidens (Dobson, 1878)"
 ]
}

 The dataset includes 571 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075226-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zccr9r
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Andropogon glaucescens Kunth"
 ]
}

 The dataset includes 34 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294002-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwxbu7
title: Occurrence Download

description: A dataset containing 5480795 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Ecuador"
 ]
}

 The dataset includes 5480795 records from 1346 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027231-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7rwnjk
title: Occurrence Download

description: A dataset containing 386 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epictia phenops"
 ]
}

 The dataset includes 386 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012612-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cuffqh
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "OccurrenceStatus is Present",
 "TaxonKey is Pestalotiopsis microspora"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012613-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5683/sp3/7sbhkh
title: Host-microbe Interactions in the Appendix of Children with Inflammatory Bowel Diseases - Supplementary Data

description: This deposit contains all supplementary materials associated with Chapter 2 of the PhD thesis of Nazanin Arjomand Fard, titled ‘Host-microbe Interactions in the Appendix of Children with Inflammatory Bowel Diseases.’ The materials include five datasets derived from whole metagenome sequencing, 16S rRNA gene sequencing, and RNA sequencing analyses; one supplementary table containing clinical and demographic metadata; and one supplementary file summarizing bacterial community composition across anatomical sites. These files provide supporting data underlying the results presented in Chapter 2. A README file is provided to describe the contents and purpose of each file. This study was approved by the University of Alberta Research Ethics Board (PRO00042980).
DOI: 10.15468/dl.ryggnv
title: Occurrence Download

description: A dataset containing 873 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ipomoea tiliacea"
 ]
}

 The dataset includes 873 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012615-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xyctj2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "Geometry POLYGON ((-120.6825 36.58517, -120.6832 36.58587, -120.6833 36.58617, -120.6838 36.58741, -120.6839 36.58825, -120.6851 36.58984, -120.687 36.59012, -120.6879 36.58858, -120.687 36.58758, -120.6879 36.58667, -120.689 36.58526, -120.6862 36.58445, -120.6839 36.58405, -120.6839 36.58436, -120.6838 36.58455, -120.6836 36.5849, -120.6833 36.58507, -120.6825 36.58517))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012616-251120083545085/datasets/export for details.
DOI: 10.15468/dl.k43qf8
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ipomoea trichocarpa"
 ]
}

 The dataset includes 25 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012617-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.98ds93
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epictia resetari"
 ]
}

 The dataset includes 16 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012619-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pfrzd3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "Geometry POLYGON ((-119.6104 35.65551, -119.6105 35.66026, -119.615 35.66034, -119.615 35.65579, -119.6104 35.65551))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012620-251120083545085/datasets/export for details.
DOI: 10.15468/dl.n3xhws
title: Occurrence Download

description: A dataset containing 196758 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to 24.085278",
 "DecimalLatitude is less than or equal to 29.085278",
 "DecimalLongitude is greater than or equal to -110.0",
 "DecimalLongitude is less than or equal to -105.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 196758 records from 301 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012597-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8f8fhd
title: Occurrence Download

description: A dataset containing 196983 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "TaxonKey is Odocoileus virginianus",
 "Year 2017-2025"
 ]
}

 The dataset includes 196983 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012592-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6p26sk
title: Occurrence Download

description: A dataset containing 284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ipomoea tricolor"
 ]
}

 The dataset includes 284 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012621-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.36722.57284
title: К РАНЖИРОВАНИЮ ЗНАЧИМОСТИ ФАКТОРОВ ДЕСТАБИЛИЗАЦИИ В СТРАНАХ АЗИИ И АФРИКИ МЕТОДАМИ МАШИННОГО ОБУЧЕНИЯ. ОНЛАЙН ПРИЛОЖЕНИЯ
DOI: 10.15468/dl.edagpd
title: Occurrence Download

description: A dataset containing 7740 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is MBML-Aves - Coleção de Aves MBML"
 ]
}

 The dataset includes 7740 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012622-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8a4r7q
title: Occurrence Download

description: A dataset containing 505 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ipomoea trifida"
 ]
}

 The dataset includes 505 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012623-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bn38fz
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Exiliboa placata"
 ]
}

 The dataset includes 142 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012624-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ry9hf3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "Geometry POLYGON ((-115.7173 34.20443, -115.7175 34.207, -115.7201 34.20681, -115.7201 34.20434, -115.7173 34.20443))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012625-251120083545085/datasets/export for details.
DOI: 10.15468/dl.pykug6
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Actualización y depuración de la base de datos del Herbario del Instituto de Ecología, AC, Centro Regional del Bajío. Fase 2, Desert Botanical Garden Herbarium, International Barcode of Life project (iBOL), Tropicos MO Specimen Data, Conservación del germoplasma vegetal en las regiones áridas y semiáridas de México, Fase 6, Digitalización de la colección científica del Herbario de Querétaro \"Dr. Jerzy Rzedowski\" QMEX, Base de datos de la distribución de la flora de la Reserva de la Biosfera Tehuacán-Cuicatlán, Agrobiodiversidad de tres regiones de importancia biocultural en el centro-occidente de México, Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (Plantas vasculares))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Isolatocereus dumortieri"
 ]
}

 The dataset includes 58 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012626-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zn7sym
title: Occurrence Download

description: A dataset containing 84179 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phoenicopterus chilensis",
 "Continent is South America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 84179 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012559-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4tmf6u
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Arizona State University Vascular Plant Herbarium, University of South Florida Herbarium (USF), Desert Botanical Garden Herbarium, Florística de las cactáceas de Durango, Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (Plantas vasculares), Computarización de colecciones y adquisición de infraestructura (mobiliario) para el herbario CIIDIR-Durango)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Echinocereus acifer"
 ]
}

 The dataset includes 64 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012627-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bzyx67
title: Occurrence Download

description: A dataset containing 475 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ipomoea triloba"
 ]
}

 The dataset includes 475 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012628-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b5k777
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is ZUEC-API - Coleção de Apicomplexa do Museu de Zoologia da UNICAMP"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012629-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dc7x5n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "Geometry POLYGON ((-115.6622 34.77828, -115.6622 34.78118, -115.6637 34.78241, -115.6684 34.78184, -115.6688 34.77733, -115.6622 34.77828))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012631-251120083545085/datasets/export for details.
DOI: 10.5281/zenodo.17741525
title: Clade Size Distributions Under the Coalescent Diversification Model

description: Characterizing patterns of biological diversity is a central goal of evolutionary biology. This requires understanding expectations for clade size—the relationship between the number of species in a clade and its age. Such expectations are key for identifying diversity outliers (e.g., specious or depauperate clades in macroevolution, or unusually large or small transmission clusters in epidemiology) and for testing alternative hypotheses about diversification. Here, we develop a general method for deriving closed-form expressions for the (joint) distribution of clade sizes under a given diversification model. We apply this approach to the constant- and variable-size coalescent model as well as the Yule model. Our results reveal that while the coalescent and Yule models produce qualitatively similar clade size patterns, they exhibit quantitative differences. Leveraging the flexibility of the coalescent framework, we further examine how transmission cluster size distributions differ between rapidly and slowly growing epidemics, finding—counterintuitively—that slowly growing epidemics are more likely to generate large clusters, a pattern often attributed to increased transmission.  

Here we provide the Supplementary Mathematica file and accompanying PDF for the analysis of clade size.
DOI: 10.5281/zenodo.17741526
title: Clade Size Distributions Under the Coalescent Diversification Model

description: Characterizing patterns of biological diversity is a central goal of evolutionary biology. This requires understanding expectations for clade size—the relationship between the number of species in a clade and its age. Such expectations are key for identifying diversity outliers (e.g., specious or depauperate clades in macroevolution, or unusually large or small transmission clusters in epidemiology) and for testing alternative hypotheses about diversification. Here, we develop a general method for deriving closed-form expressions for the (joint) distribution of clade sizes under a given diversification model. We apply this approach to the constant- and variable-size coalescent model as well as the Yule model. Our results reveal that while the coalescent and Yule models produce qualitatively similar clade size patterns, they exhibit quantitative differences. Leveraging the flexibility of the coalescent framework, we further examine how transmission cluster size distributions differ between rapidly and slowly growing epidemics, finding—counterintuitively—that slowly growing epidemics are more likely to generate large clusters, a pattern often attributed to increased transmission.  

Here we provide the Supplementary Mathematica file and accompanying PDF for the analysis of clade size.
DOI: 10.15468/dl.xaztag
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ipomoea violacea"
 ]
}

 The dataset includes 173 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012630-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ezrqtm
title: Occurrence Download

description: A dataset containing 16016 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-70.49057 -33.30237,-70.09969 -33.30237,-70.09761 -32.86267,-70.49989 -32.86068,-70.49057 -33.30237))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 16016 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012632-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wncjmy
title: Occurrence Download

description: A dataset containing 476 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Amanita basii"
 ]
}

 The dataset includes 476 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012633-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.