cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.epam88
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Apteronotus baniwa de Santana & Vari, 2013)"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013593-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pa4zv2
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Taraxacum janchenii Kirschner & Stepánek"
 ]
}

 The dataset includes 15 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006906-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ksqfbj
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oedipina altura Brame, 1968"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0310508-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gmhb7s
title: Occurrence Download

description: A dataset containing 1128 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Moraea fugax (D.Delaroche) Jacq."
 ]
}

 The dataset includes 1128 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032068-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q6kkcw
title: Occurrence Download

description: A dataset containing 290 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchostele cordata (Lindl.) Soto Arenas & Salazar"
 ]
}

 The dataset includes 290 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0314006-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5yt53u
title: Occurrence Download

description: A dataset listing the 92765 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Oceania",
 "Country is Australia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Insecta"
 ]
}

 The dataset's 92765 records were derived from 516 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012158-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d4j46j
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhododendron faucium D.F.Chamb."
 ]
}

 The dataset includes 34 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0365014-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ysbhxe
title: Occurrence Download

description: A dataset containing 860 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Viola pinetorum Greene"
 ]
}

 The dataset includes 860 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032071-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y9r9s3
title: Occurrence Download

description: A dataset containing 107417 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Euphydryas aurinia (Rottemburg, 1775), Euphydryas cynthia (Denis & Schiffermüller, 1775))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 107417 records from 445 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0240583-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qk2z8a
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stevia jujuyensis Cabrera"
 ]
}

 The dataset includes 20 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144107-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.6789707
title: Tonga Eruption Grape Data by AB4EJ

description: What is on these plots: the upper trace is the waterfall showing spectrum 10 Hz wide (“narrow”). The strongest signal has been emphasized in red. The lower trace is relative amplitude (unitless and non-calibrated).



	
2022-01-14 – the day before the explosion, as a baseline. In the upper left, you see the standard deviation of the spectrum data for the day, which I use as a measure of ionospheric activity.
	
2022-01-15 – day of the explosion – according to various papers, a wave came through North America after 1400Z (if I understand correctly). Note the higher standard deviation for the day, which shows a combination of the Tonga pulse plus higher geomagnetic activity that day.
	
2022-01-16 – day after the explosion, things are back to normal; standard deviation back down to around 14.



 


HOW TO REPRODUCE THESE PLOTS:



	
Download the Box data to your local drive; ensure that it has a directory structure as shown in the .emz file (in this example, you have downloaded to the D: drive).



The most critical thing is that the directory structure must be what the program expects; it should already be set up this way in the ch0 folder.


 


Set the variables in the program:


dataDir = "D:\\Tonga_AB4EJ"


metadata_dir = dataDir + '\\ch0\\metadata'


 


The variable dataDir must point at the directory above the one that contains ch0.


The variable metadata_dir must point at the directory that contains the file drf_properties.h5 .


 


Using  the program


Run python program plotspectrum.py. (Note that you must have Digital RF installed. Best way to do this is to work in a virtual environment, then do:  pip install digital_rf )



Program will prompt for a date. To see Jan 14, here enter:  2022-01-14


You should get a plot like shown under point 1, above. Note that the program is quite slow and may take 5 – 10 minutes to read the file & create the plot.


If you get the following error…


ValueError: No channels found: top_level_directory_arg = C:\Users\bengelke\Box\share\Tonga_AB4EJ1. If path is correct, you may need to run recreate_properties_file to re-create missing drf_properties.h5 files.


… it usually means that (a) the directory structure is not exactly correct, and/or (b) there is a typo in one of the directory settings dataDir or metadataDir.
DOI: 10.5281/zenodo.6789708
title: Tonga Eruption Grape Data by AB4EJ

description: What is on these plots: the upper trace is the waterfall showing spectrum 10 Hz wide (“narrow”). The strongest signal has been emphasized in red. The lower trace is relative amplitude (unitless and non-calibrated).



	
2022-01-14 – the day before the explosion, as a baseline. In the upper left, you see the standard deviation of the spectrum data for the day, which I use as a measure of ionospheric activity.
	
2022-01-15 – day of the explosion – according to various papers, a wave came through North America after 1400Z (if I understand correctly). Note the higher standard deviation for the day, which shows a combination of the Tonga pulse plus higher geomagnetic activity that day.
	
2022-01-16 – day after the explosion, things are back to normal; standard deviation back down to around 14.



 


HOW TO REPRODUCE THESE PLOTS:



	
Download the Box data to your local drive; ensure that it has a directory structure as shown in the .emz file (in this example, you have downloaded to the D: drive).



The most critical thing is that the directory structure must be what the program expects; it should already be set up this way in the ch0 folder.


 


Set the variables in the program:


dataDir = "D:\\Tonga_AB4EJ"


metadata_dir = dataDir + '\\ch0\\metadata'


 


The variable dataDir must point at the directory above the one that contains ch0.


The variable metadata_dir must point at the directory that contains the file drf_properties.h5 .


 


Using  the program


Run python program plotspectrum.py. (Note that you must have Digital RF installed. Best way to do this is to work in a virtual environment, then do:  pip install digital_rf )



Program will prompt for a date. To see Jan 14, here enter:  2022-01-14


You should get a plot like shown under point 1, above. Note that the program is quite slow and may take 5 – 10 minutes to read the file & create the plot.


If you get the following error…


ValueError: No channels found: top_level_directory_arg = C:\Users\bengelke\Box\share\Tonga_AB4EJ1. If path is correct, you may need to run recreate_properties_file to re-create missing drf_properties.h5 files.


… it usually means that (a) the directory structure is not exactly correct, and/or (b) there is a typo in one of the directory settings dataDir or metadataDir.
DOI: 10.15468/dl.vsmys3
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fusarium asiaticum O'Donnell, T.Aoki, Kistler & Geiser"
 ]
}

 The dataset includes 122 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0240592-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wskmj6
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cuscuta globulosa Benth."
 ]
}

 The dataset includes 15 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144085-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.py8ycn
title: Occurrence Download

description: A dataset containing 105289 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Euphydryas aurinia (Rottemburg, 1775))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 105289 records from 442 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0240584-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6abzvz
title: Occurrence Download

description: A dataset containing 2509 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhizopogon roseolus (Corda) Th.Fr."
 ]
}

 The dataset includes 2509 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000533-180925134338326/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7ve34
title: Occurrence Download

description: A dataset listing the 9 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sterculia stipulata Korth."
 ]
}

 The dataset's 9 records were derived from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021594-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xwspva
title: Occurrence Download

description: A dataset containing 1288 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Puma concolor (Linnaeus, 1771)"
 ]
}

 The dataset includes 1288 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014388-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmtg0a
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tanacetum mucronulatum (Hoffmanns. & Link) Heywood"
 ]
}

 The dataset includes 60 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000533-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xtahys
title: Occurrence Download

description: A dataset containing 3051 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agalychnis dacnicolor (Cope, 1864)"
 ]
}

 The dataset includes 3051 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009438-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hkhawa
title: Occurrence Download

description: A dataset containing 56419 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 {
 "or" : [
 "Country is Australia",
 "Country is Papua New Guinea",
 "Country is Indonesia"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Petauridae"
 ]
}

 The dataset includes 56419 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066489-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9xlpxr
title: Occurrence Download

description: A dataset containing 1314 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fauna and flora inventories (terrestrial and limnetic) from the South of Belgium"
 ]
}

 The dataset includes 1314 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021601-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4zldbu
title: Occurrence Download

description: A dataset containing 9089 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Ateles geoffroyi Kuhl, 1820",
 "TaxonKey is Brachyteles hypoxanthus (Kuhl, 1820)",
 "TaxonKey is Brachyteles arachnoides (É.Geoffroy Saint-Hilaire, 1806)",
 "TaxonKey is Ateles fusciceps Gray, 1866",
 "TaxonKey is Ateles marginatus É.Geoffroy Saint-Hilaire, 1809",
 "TaxonKey is Ateles hybridus I.Geoffroy Saint-Hilaire, 1829",
 "TaxonKey is Ateles chamek (Humboldt, 1812)",
 "TaxonKey is Ateles belzebuth É.Geoffroy Saint-Hilaire, 1806",
 "TaxonKey is Ateles paniscus (Linnaeus, 1758)",
 "TaxonKey is Oreonax flavicauda (Humboldt, 1812)",
 "TaxonKey is Lagothrix poeppigii Schinz, 1844",
 "TaxonKey is Lagothrix lugens Elliot, 1907",
 "TaxonKey is Lagothrix cana (É.Geoffroy Saint-Hilaire, 1812)",
 "TaxonKey is Lagothrix lagothricha (Humboldt, 1812)"
 ]
}

 The dataset includes 9089 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006468-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9uvs9g
title: Occurrence Download

description: A dataset containing 89521 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-6.65222 36.78289,-5.82825 35.84453,-4.00452 36.5626,-4.04846 37.83148,-5.57556 37.68382,-6.65222 36.78289))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 89521 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018494-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.heza5x
title: Occurrence Download

description: A dataset containing 1620 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monotes kerstingii Gilg"
 ]
}

 The dataset includes 1620 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021601-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.92v9tk
title: Occurrence Download

description: A dataset containing 4198 species occurrences available in GBIF matching the query:
{
 "and" : [
 "NetworkKey is 3aee7756-565e-4dc5-b22c-f997fbd7105c",
 "RecordedBy ~*humboldt*"
 ]
}

 The dataset includes 4198 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009449-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j3ynn9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Seabirds of the Southern and South Indian Ocean"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066490-210914110416597/datasets/export for details.
DOI: 10.15468/dl.p6474m
title: Occurrence Download

description: A dataset containing 199 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amastridium Cope, 1861"
 ]
}

 The dataset includes 199 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021603-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.he6gkh
title: Occurrence Download

description: A dataset containing 772 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nardostachys jatamansi (D.Don) DC."
 ]
}

 The dataset includes 772 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007921-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nygwmn
title: Occurrence Download

description: A dataset containing 285 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Martes pennanti (Erxleben, 1777)",
 "HasCoordinate is True",
 "Country is United States of America",
 "Year is greater than or equal to 1960",
 "Year is less than or equal to 2020",
 "Month is greater than or equal to January",
 "Month is less than or equal to December",
 "HasGeospatialIssue is False",
 "DecimalLatitude is greater than or equal to 24.5",
 "DecimalLatitude is less than or equal to 49.5",
 "DecimalLongitude is greater than or equal to -125.0",
 "DecimalLongitude is less than or equal to -66.5"
 ]
}

 The dataset includes 285 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0116184-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cga2ka
title: Occurrence Download

description: A dataset containing 5282 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-98.32031 15.51015,-50.03906 34.50052,-57.07031 57.19977,-92.22656 60.81635,-138.63281 54.57206,-124.57031 28.51054,-98.32031 15.51015))",
 "HasCoordinate is true",
 "TaxonKey is Prunus serotina Ehrh.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5282 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008647-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rfyft5
title: Occurrence Download

description: A dataset containing 2014 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-74.55357 6.00437,-74.44851 6.00437,-74.44851 6.12659,-74.55357 6.12659,-74.55357 6.00437))",
 "OccurrenceStatus is Present",
 "TaxonKey is Chordata"
 ]
}

 The dataset includes 2014 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066700-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.