cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12638474.v1
title: Sierra Nevada (USA) Snow Water Equivalent (SWE) Volume Time Series - Southern Sierra Nevada

description: This data set contains 1 April snow water equivalent (SWE) volumes for the southern region of Sierra Nevada, USA. The SWE volumes are derived by merging information from snow courses and a snow reanalysis. The data set file contains two columns: Year (column 1) and SWE in km<sup>3</sup> (column 2).<br>For more information about the domain, methods, and time series, refer to Huning and AghaKouchak (2020a).<br><br><b>Reference</b>Huning, L.S., and AghaKouchak, A. (2020a), Approaching 80 years of snow water equivalent information by merging different data streams, <i>Scientific Data</i>, 7, 333, https://doi.org/10.1038/s41597-020-00649-1.<br><b>As a condition of using data from this collection, you must cite this data collection and the corresponding publication: </b>1) Huning, L.S., and AghaKouchak, A. (2020b), Sierra Nevada (USA) snow water equivalent (SWE) volume time series, <i>figshare</i>, Collection, https://doi.org/10.6084/m9.figshare.c.5055518.<br>2) Huning, L.S., and AghaKouchak, A. (2020a), Approaching 80 years of snow water equivalent information by merging different data streams, <i>Scientific Data</i>, 7, 333, https://doi.org/10.1038/s41597-020-00649-1.
DOI: 10.6084/m9.figshare.27930849.v1
title: Data from: Artificial light at night (ALAN) negatively affects the nest site occupancy but does not influence breeding success in two sympatric owl species

description: Light pollution affects negatively a broad range of animal species, with severe implications for conservation policy development and strategic planning globally. Birds are one of the most widely used ecological indicator groups in monitoring environmental changes. However, most studies examining the effects of light pollution are focused on diurnal bird species. It would therefore be necessary to study in more detail these effects on species with at least crepuscular or nocturnal animals, since they may be more vulnerable. We investigated the effects of illumination on presence of breeding of the barn owl (Tyto alba) and tawny owl (Strix aluco) in illuminated vs. unilluminated towers and the reproductive output in nest boxes in church towers by comparing the numbers of eggs and chicks fledged. We found the breeding presence was reduced in illuminated towers in both species but no difference in reproduction parameters for either of the species. Our results underscores that light pollution has a negative consequence on the reproduction of barn owls and tawny owls due to reducing breeding site suitability. This raises the threat that artificial light at night may hinder the conservation of such nocturnal bird species whose reproduction may be increasingly connected to human settlements in the future.
DOI: 10.1594/pangaea.121300
title: Total carbon dioxide and alkalinity at station TT008_6-CTD64
DOI: 10.1594/pangaea.121303
title: Total carbon dioxide and alkalinity at station TT008_7-CTD67
DOI: 10.17632/gnrpbkhsj3
title: Refractive index of 4 glycols versus wavelength and temperature

description: The dataset consists of tables of refractive index values versus wavelength and temperature n(lambda, T) for 4 hygroscopic organic liquids. Each table corresponds to one liquid: (i) HEG – hexaethylene glycol, 96% abcr GmbH lot 1508060; (ii) PEG – pentaethylene glycol, 98.0%, Alfa Aesar lot 10207595 and pentaethylene glycol, 97.0%, abcr GmbH lot 1509179 (no differences in measurements were found) ; (iii) TPG – tripropylene glycol, ≥99%, Alfa Aesar lot H25W018; (iv) DPG – dipropylene glycol, mixture of isomers, 99%, Alfa Aesar lot 10201331. The measurements cover the range from 390 to 1070 nm in wavelength and from 1 to 45ºC in temperature. Each data point corresponds to a mean value of several measurements. Outlier measurement series were discarded. The accuracy of the refractive index measurement is estimated to be ±0.0003, while the accuracy of the wavelength measurement is ~1%, and the accuracy of the temperature measurement is ±0.5 K. The measurements were performed with a modified Abbe refractometer. The calibration was performed with water at each temperature from 5 to 45ºC and with ethylene glycol at 1ºC. The details of experimental setup and procedures can be found in [Jakubczyk et al., Chromatic dispersion and thermal coefficients of hygroscopic liquids: 5 glycols and glycerol, Scientific Data, (2023) 10:894, DOI: 10.1038/s41597-023-02819-3]. The SketchUp file (.skp, 2017 format) contains the corresponding 3D model, while the .mp4 file contains a walk-around video of the setup, generated from the model.
DOI: 10.6084/m9.figshare.3515336.v1
title: Appendix A. Functional characterization of fishes.

description: Functional characterization of fishes.
DOI: 10.6084/m9.figshare.5297251.v1
title: Gwas imputated data

description: Gwas imputated dataset for growth traits in <i>Salmo salar.</i>
DOI: 10.1594/pangaea.121242
title: Total carbon dioxide and alkalinity at station TT008_4-CTD3
DOI: 10.1594/pangaea.121304
title: Total carbon dioxide and alkalinity at station TT008_8-CTD68
DOI: 10.17632/7xp5zd7vgy
title: Physiological efficiency during the vegetative stage of tomato crops developed from magnetically treated seeds

description: This study aimed to identify whether the positive effects found in the germination time of the magnetically treated tomato seeds are conserved until the vegetative stage, and how the value of morphological parameters change. Plant height, stem diameter, and leaf number were directly and independently correlated with time, whereas chlorophyll content and leaf area were time-dependent. 225 experimental units (one tomato plant) were divided into three experimental groups of 75 plants each. It has data for tree treatments: (T1) Santa clara cultivar plants generated from magnetically treated seeds; T2 (control 1) Santa Clara plants generated from seeds without magnetic treatment, and T3, a high cost seed cultivar (Roble hybrid) as secondary control.
DOI: 10.17632/xcksdf9g9y
title: Evaluaciones externas en América Latina procesos logísticos. El caso de México

description: Documentos en el que además de un panorama general sobre el contexto internacional determinante de decisiones en materia evaluativa, hay una contextualización general de cada país objeto de estudio. En este último generalidades necesarias sobre el sistema evaluativo, con un panorama sobre los ciclos educativos y con detalles sobre aquellos en los cuales se efectúa la evaluación externa. Igualmente, se presentan las características de éstas evaluaciones ofreciendo información detallada acerca de cómo se diseñan, planifican y aplican, ofreciendo mayores detalles en aquello que ocurre con los resultados: divulgación y uso.
DOI: 10.1594/pangaea.121243
title: Total carbon dioxide and alkalinity at station TT008_4-CTD4A
DOI: 10.1594/pangaea.121247
title: Total carbon dioxide and alkalinity at station TT008_5-CTD14
DOI: 10.17632/2c97jkvx9c
title: UFMylation maintains YAP stability to promote vascular endothelial cell senescence

description: Endothelial cell senescence is an accomplice for vascular aging, which leads to cardiovascular diseases (CVD). Evidences showed that Hippo- Yes-associated protein (YAP) signaling pathway plays an essential role in aging-associated CVD. However, the exact role of YAP protein in endothelial cell senescence remains not fully clear. Here, we reported that YAP was elevated in senescent human umbilical vein endothelial cells (HUVECs) and inhibition of YAP by either specific siRNAs or inhibitor Verteporfin could attenuate HUVECs senescence. In contrast, overexpression of YAP induces cell senescence. Besides, we found that UFMylation activity and YAP were both elevated in senescent cells. Mechanistically, we found that UFMylation, a newly identified ubiquitin-like modification with essential biological functions, maintains the stability of YAP and further found that YAP is a substrate for UFMylation. Importantly, we found that compound 8.5, an inhibitor of E1 of UFMylation, can attenuate cell senescence with reduced YAP protein and alleviate vascular aging and improve cardiac function in aged mice. Therefore, compound 8.5 may be a potential small molecule for delaying vascular aging. Together, our finding provides molecular mechanism by which UFMylation maintains YAP stability and exerts an important role in promoting cell senescence, and identified that a previously unrecognized UFMylation is a potential therapeutic target for anti-aging.
DOI: 10.17632/fxvt332g54
title: Data for: Efficacy of individualized homeopathic treatment of insomnia: Double-blind, randomized, placebo-controlled clinical trial

description: Master chart of Insomnia RCT of Individualized homeopathy versus Placebo
DOI: 10.17632/n4f79j4hhz
title: Inequality and Optimal Monetary Policy in the Open Economy

description: CODES FOR "INEQUALITY AND OPTIMAL MONETARY POLICY IN THE OPEN ECONOMY" BY SUSHANT ACHARYA AND EDOUARD CHALLE FOR PUBLICATION IN THE JOURNAL OF INTERNATIONAL ECONOMICS
************************************************************************
The codes are written in MATLAB and run in MATLAB 4.2.0.2806996. MATLAB is not freeware and can be obtained from https://www.mathworks.com/products/matlab.html
The code also requires the MATLAB Symbolic Math Toolbox Version 24.2 

Instructions:
1. Run pics_for_paper.m to generate Figures 1,2,3 and 4. 

Other functions called by the above scripts:
a) makesteady.m : this function computes the steady state of the Ramsey plan in the HANK economy.
b) make_steady_RANK.m : this function computes steady states of the Ramsey plan for the RANK benchmark.
c) optdynamics.m : this function computes the optimal dynamics in response to an aggregate shock shock in the HANK economy.
d) opt_dynamics_RANK.m : this function computes the optimal dynamics in response to an aggregate shock shock in the RANK economy.
e) pricestab.m : this function coputes the dyamics in response to shocks in HANK when monetary policy inefficiently implements price stability.
F) colors.m : this function assigns names to returns RGB tuples adapted from % http://en.wikipedia.org/wiki/List_of_colors, and is used in plotting curves in all figures.
DOI: 10.6084/m9.figshare.17371910.v1
title: Supplementary Material for: Crosslinked layered surfaces of heparin and poly(L-lysine) enhance mesenchymal stromal cells behavior in the presence of soluble interferon gamma

description: Human mesenchymal stromal cells (hMSCs) are multipotent cells that have been proposed for the treatment of immune-mediated diseases. Culturing hMSCs on tissue culture plastic reduces their therapeutic potential in part due to the lack of extracellular matrix components. The aim of this study is to evaluate multilayers of heparin and poly(L-lysine) (HEP/PLL) as a bioactive surface for hMSCs stimulated with soluble interferon gamma (IFN‐γ). Multilayers were formed, via layer-by-layer assembly, with HEP as the final layer and supplemented with IFN-γ in the culture medium. Multilayer construction and chemistry were confirmed using Azure A staining, quartz crystal microbalance (QCM), and X-ray photoelectron spectroscopy. hMSCs adhesion, viability, and differentiation, were assessed. Results showed that (HEP/PLL) multilayer coatings were poorly adhesive for hMSCs. However, performing chemical crosslinking using 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide and N-hydroxysuccinimide (EDC/NHS) significantly enhanced hMSCs adhesion and viability. The immunosuppressive properties of hMSCs cultured on crosslinked (HEP/PLL) multilayers were confirmed by measuring the level of indoleamine 2,3-dioxygenase (IDO) secretion. Lastly, hMSCs cultured on crosslinked (HEP/PLL) multilayers in the presence of soluble IFN- γ successfully differentiated towards the osteogenic and adipogenic lineages as confirmed by Alizarin red, and oil-red O staining, as well as alkaline phosphatase activity. This study suggests that crosslinked (HEP/PLL) ﬁlms can modulate hMSCs response to soluble factors, which may improve hMSCs-based therapies aimed at treating several immune diseases.
DOI: 10.1594/pangaea.121246
title: Total carbon dioxide and alkalinity at station TT008_5-CTD13
DOI: 10.1594/pangaea.121251
title: Total carbon dioxide and alkalinity at station TT008_5-CTD18
DOI: 10.6084/m9.figshare.13627421.v1
title: Additional file 4 of Minimal genome-wide human CRISPR-Cas9 library

description: Additional file 4: Table S3. Genome-wide minimal human CRISPR-Cas9 library, MinlibCas9.
DOI: 10.6084/m9.figshare.23935023.v2
title: FAWS Map 2020

description: Map of the Forest area Available for Wood Supply (FAWS) of Europe for the year 2020 matching the harmonized FAWS area statistics at the administrative unit. The map pixels with value = 1 represent the areas with forest available for wood supply, in units of ha (1 pixel = 1 ha).The map is available in GeoTIFF format at the spatial resolution of 100 x 100 m in ETRS89 LAEA (EPSG:3035) coordinate reference system for the extent of Europe (FAWS_Map_2020.tif)
DOI: 10.6084/m9.figshare.7886324.v1
title: hCINAP AML survival.xlsx

description: For analyzing the expression level of hCINAP in patients with AML, the recomputed gene expression datasets of TCGA LAML cancer type and GTEx Bone Marrow that were based on the gencode v23 gene model from UCSC Xena (http://xena.ucsc.edu/) were downloaded. The clinical data of TCGA LAML cancer type were downloaded from the GDC Data Portal (https://gdc-portal.nci.nih.gov/). The expression unit was TPM (transcript per million). We compiled the datasets of TCGA LAML cancer and GTEx Bone Marrow tissue for differential expression and survival analyses. The sample set included 243 samples (including survival information of 173 patients and 70 normal samples).
DOI: 10.6084/m9.figshare.9770690.v1
title: Pose and pressure mat data of participants adopting various poses while supine on a robotic bed.

description: Pose and pressure mat data of participants adopting various poses while supine on a robotic bed. The bed had a pressure-sensing mat on which the participants lay. The room was fitted with motion tracking cameras from which ground-truth pose was found.This data is used in several papers including "Estimating 3D Human Pose on a Configurable Bed from a Single Pressure Image." Clever, Henry M., Ariel Kapusta, Daehyung Park, Zackory Erickson, Yash Chitalia, and Charles C. Kemp. arXiv preprint arXiv:1804.07873 (2018).
DOI: 10.1594/pangaea.116154
title: Total carbon dioxide and total alkalinity at station TT049_11-4
DOI: 10.1594/pangaea.120922
title: Partial pressure of CO2 in water, along ship track of cruise TT007
DOI: 10.17632/zsyrpbmx6j
title: Evaluation of Association Between Yearlong Air Pollution and Moderate-Severe Atopic Dermatitis: A United States Cross-Sectional Claims Analysis 

description: Supplemental Material for "Evaluation of Association Between Yearlong Air Pollution and Moderate-Severe Atopic Dermatitis: A United States Cross-Sectional Claims Analysis"
DOI: 10.6084/m9.figshare.11856039.v6
title: Dataset for manuscript: Effects of polyisoprenoids from Avicennia lanata and Avicennia alba leaves on the gene expression of P13K, Akt1, mTOR, P53, and EGFR in human colorectal adenocarcinoma WiDr cells

description: This dataset contains raw material for Figure 2 and Figure 3
DOI: 10.6084/m9.figshare.24547609.v2
title: A single-cell chromatin accessibility dataset of human primed and naïve pluripotent stem cell-derived teratoma

description: Teratoma, due to its remarkable ability to differentiate into multiple cell lineages, is a valuable model for studying human embryonic development. The similarity of the gene expression and chromatin accessibility patterns in these cells to those observed in vivo further underscores its potential as a research tool. Notably, teratomas derived from human naïve (pre-implantation epiblast-like) pluripotent stem cells (PSCs) have larger embryonic cell diversity and contain extraembryonic lineages, making them more suitable to study developmental processes. However, the cell type-specific epigenetic profiles of naïve PSC teratomas have not been yet characterized. Using single-cell assay for transposase-accessible chromatin sequencing (scATAC-seq), we analyzed 66,384 cell profiles from five teratomas derived from human naïve PSCs and their post-implantation epiblast-like (primed) counterparts. We observed 17 distinct cell types from both embryonic and extraembryonic lineages, closely resembling the corresponding cell types in human fetal tissues. Additionally, we identified key transcription factors involved in cell fate specification. Our dataset provides a resource for investigating gene regulatory programs in a relevant model of human embryonic development.
DOI: 10.6084/m9.figshare.25901743.v1
title: Audiobook dataset 1

description: The dataset is related to audiobooks discount pricing and consumers' rating.
DOI: 10.6084/m9.figshare.29109653.v1
title: interview Sophie.docx

description: In-depth interview transcription
DOI: 10.1594/pangaea.116207
title: Total carbon dioxide and total alkalinity at station TT049_4-2
DOI: 10.1594/pangaea.120919
title: Partial pressure of CO2 in air, along ship track of cruise TT007
DOI: 10.17632/x4krt22tf4
title: Intergrated Multi-omics Sequencing Reveals Metabolic Reprograms in the Progression of ccRCC

description: 100 samples from treatment-naive ccRCC patients and 50 matched normal adjacent tissues (NATs) were profiled with whole exon sequencing (WES), whole transcriptome sequencing (WTS), data-independent acquisition (DIA)-based proteome and untargeted metabolome technology to identify the general molecular characteristics of the TJ-RCC cohort. Single-nucleic RNA sequencing, single-nucleic multiome, spatial transcriptome and spatial metabolome were performed on part of these 100 tumors to detail the ITH inside ccRCC.
DOI: 10.6084/m9.figshare.24013848.v1
title: Hysteresis loops (Tensile)

description: Hysteresis loops (Tensile)
DOI: 10.6084/m9.figshare.812598.v1
title: Responses to Stimulus 16

description: Matlab data file gathering continuous measures of emotion, subjective and physiological, to repeated listenings of stimulus 16,Invention No. 2 in C minor BWV 773,Glenn Gould,J.S.Bach, in the solo response project.<br>Please refere to Readme.txt for more details, and http://soloresponseproject.com/ for related research.
DOI: 10.1594/pangaea.116155
title: Total carbon dioxide and total alkalinity at station TT049_11-6
DOI: 10.1594/pangaea.116208
title: Total carbon dioxide and total alkalinity at station TT049_4-6
DOI: 10.17632/dbkf9pfvkh
title: Millimeter-Scale Ultrafast Lung Ventilation MRI Using Hyperpolarized Propane Gas

description: This deposited data is the raw MRI scanner imaging data used in a corresponding manuscript. The supplied data is organized by the Figures' names. The data is the raw DICOM data from the MRI scanner.
DOI: 10.6084/m9.figshare.23578086.v1
title: Original_Data_Niggli_etal_mBio

description: This file contains all the raw data used in Niggli et al. (2023) Rapid and strain-specific resistance evolution of Staphylococcus aureus (SA) against inhibitory molecules secreted by Pseudomonas aeruginosa (PA), published in mBio.
DOI: 10.6084/m9.figshare.28525913.v1
title: Macintosh and Vie Scope DATA.xlsx

description: Data derived from a randomized clinical trial with title: The First-Attempt and Overall Rate of Successful Intubation, the Required Time for Intubation and the Glottis Visualization, Using the Vie Scope and the Macintosh Laryngoscope in Patients with Expected Easy Airway: A Randomized Controlled Trial.
DOI: 10.6084/m9.figshare.28557692.v2
title: Rawdata for AI Non-Contact ECG

description: <br>Thank you very much for your interest in our work!This repository contains raw data for AI Radar ECG.Thank you!Wishing you happiness every day.
DOI: 10.6084/m9.figshare.5826153.v1
title: Zhu Agricultural Climate Indices

description: See publication for details
DOI: 10.1594/pangaea.116156
title: Total carbon dioxide and total alkalinity at station TT049_12-2
DOI: 10.1594/pangaea.116157
title: Total carbon dioxide and total alkalinity at station TT049_12-5
DOI: 10.1594/pangaea.116218
title: Total carbon dioxide and total alkalinity at station TT049_9-4
DOI: 10.17632/c5yvn32dzg
title: RoCoLe: A robusta coffee leaf images dataset

description: The dataset contains 1560 robusta coffee leaf images with visible mites and spots (denoting coffee leaf rust presence) for infection cases and images without such structures for healthy cases. In addition, the data set includes annotations regarding state (healthy and unhealthy) and the severity of disease (leaf area with spots).
DOI: 10.6084/m9.figshare.19122452.v1
title: Twisted Rainbow Light and Nature-Inspired Generation of Vector Vortex Beams

description: Raw experimental data for manuscript Twisted Rainbow Light and Nature-Inspired Generation of Vector Vortex Beams.
DOI: 10.1594/pangaea.116099
title: Total carbon dioxide and total alkalinity at station TT043_6-4
DOI: 10.1594/pangaea.116169
title: Total carbon dioxide and total alkalinity at station TT049_17-8
DOI: 10.17632/mvxfdrc83m
title: Data for: DATASETS OF SOCIO- ECONOMIC, DEMOGRAPHIC, ENTREPRENEURSHIP AND FINANCIAL INCLUSION INDICATORS OF SELECTED SITES IN ETHIOPIA: ADDIS ABABA, DIRE DAWA, SHIRKA ZONE.

description: These files contain CSV and DTA format data files for three study sites in Ethiopia. Dis aggregated socio-economic and demographic data at household and individual level included. In addition,questionnaires,enumerators' training manual and code-book(data dictionaries) are enclosed.
DOI: 10.6084/m9.figshare.14847786.v1
title: HydroWASTE version 1.0

description: <br> HydroWASTE is a spatially-explicit global database of 58,502 WWTPs and their characteristics. This database was developed by combining national and regional datasets with auxiliary information to derive or complete missing WWTP characteristics, including the amount of people served. A high-resolution river network with streamflow estimates (HydroATLAS: https://doi.org/10.6084/m9.figshare.9890531) was used to georeference WWTP outfall locations and calculate each plant’s dilution factor (i.e., the ratio of the natural discharge of the receiving waterbody to the WWTP effluent discharge). Version 1.0 of HydroWASTE is fully described in Ehalt Macedo et al. 2022 (see references below). There is 1 zipped data file containing: 1. HydroWASTE_v10.csv - database in csv format 2. README.txt - overview information about the database <br> Reference: Ehalt Macedo, H., Lehner, B., Nicell, J., Grill, G., Li, J., Limtong, A., and Shakya, R.: Distribution and characteristics of wastewater treatment plants within the global river network, Earth Syst. Sci. Data, 14, 559–577, https://doi.org/10.5194/essd-14-559-2022, 2022.
DOI: 10.6084/m9.figshare.25138580.v2
title: TCGA

description: The feature matrix and PSN matrix for TCGA dataset.For paper "DeepMoIC: Multi-Omics Data Integration via Deep Graph Convolutional Networks for Cancer Subtype Classification".
DOI: 10.6084/m9.figshare.7552853.v3
title: multiAtlasTT_data_hcptrained

description: Trained data to be used with the maTT2 tools. Check out the github or the original figshare repository for more information: <br>https://doi.org/10.6084/m9.figshare.5998583<br>While the original data for maTT2 tools was trained with the mindboggle-101 subjects, the data here was trained using the HCP unrelated 100.<br>
DOI: 10.1594/pangaea.116159
title: Total carbon dioxide and total alkalinity at station TT049_13-3
DOI: 10.1594/pangaea.116170
title: Total carbon dioxide and total alkalinity at station TT049_18-2