cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7910/dvn/hofpzj
title: Temporal and spatial topography of cell proliferation in cancer

description: The collection comprises preservation-quality files of Minerva output files without needing download terabyte scale images. To view data in a browser follow this link: &lt;a&gt;https://www.cycif.org/data/gaglia-PCQ-2020/osd-0813&lt;/a&gt;.

This dataset uses the Minerva Suite, a series of software tools developed by the Laboratory of Systems Pharmacology to visualize multiplexed tissue image data in a web browser. Researchers or pathologists can annotate and describe images for users and users can use zooming and panning features to explore the full resolution images without needing to download multi-GB/TB image files. These annotated and unannotated images are created by uploading quality controlled ome.tiffs and segmentation masks, along with channel metadata and text descriptions, into the Minerva Author tool. These input files produce .json files, an .html file, and hundreds of .jpg pyramid files that make the images browsable online.

This dataset displays multiplexed images generated using tissue-based cyclic immunofluorescence (t-CyCIF) with a 20X/0.75NA objective. This story contextualizes new metrics of Multivariate Proliferation Index (MPI) and cell cycle coherence in an untreated human HER2 positive primary breast cancer resection. In this story, we established lineage markers (CD45, Vimentin, e-Cadherin and aSMA) to distinguish epithelial cells from immune and stromal cells. Then we use proliferation and cell cycle arrest markers to define a Multivariate Proliferation Index, or MPI. Finally we focus on the proliferative population (MPI+1) and extract cell cycle protein dynamics from tissue images.
description: Minerva Browser, v3.2.6
DOI: 10.7910/dvn/hpcmhd
title: Townsend Thai Project Household Annual Resurvey, 2006 [limited version]

description: (*NOTE: This is a limited version that includes only the four provinces: Chacheongsao, Buriram, Lopburi, and Srisakate. )
&lt;br/&gt; &lt;br/&gt; The project is carried out in Thailand under the direction of Khun Sombat Sakuntasathhien and dedicated staff. The project is administered in the United States at the National Opinion Research Center and the University of Chicago. Survey design and research collaborators include Anna Paulson of Northwestern University, Tae Joeng Lee of Yonse University, and Michael Binford of the University of Florida. Robert M. Townsend is overall project director and principal investigator. &lt;br
/&gt; &lt;br/&gt; The initial purpose of the NICHD-NSF funded project was to evaluate the role of informal institutions such as the family and local networks in helping to support the welfare and well-being of individuals in semi-urban and rural areas of Thailand. Risk, and the potentially adverse and direct consequences of household- and firm-specific shocks is a key part of project. The mediating role of the family and social and economic networks in the mobilization of savings and allocation of cred
it was also deemed essential. These networks are not viewed in isolation but rather are part of the larger village, regional, and national level financial system. Thus the project includes an evaluation of village-level financial institutions, such as Production Credit Groups and rice banks, and national-level financial institutions such as commercial banks and the government agricultural bank, the Bank for Agriculture and Agricultural Cooperatives (BAAC).
&lt;br/&gt; &lt;br/&gt; Indeed, the project has both micro and macro aspects. It seeks to evaluate informal and formal financial institutions and markets and to construct and evaluate macro models of growth, fluctuations, and crisis. The macro models are based on the measured micro- underpinnings. &lt;br/&gt; &lt;br/&gt; Household Resampling. Every effort is made to resurvey previously interviewed households. In l998 we successfully reinterviewed 95.32% of the l997 target, previously- surveyed population. In l999 w
e resurveyd 97% of the l997 target. Most of the attrition is to due to the household having moved out of the village, though a handful have refused to be interviewed, and a third cause is death of the head. If in any year we are short of the target 15 households per village, we include random replacements, for the purpose of constructing village average variables, for example.
&lt;br/&gt;
description: Subject: STANDARD DEPOSIT TERMS 1.0 Type: DATAPASS:TERMS:STANDARD:1.0 Notes: This study was deposited under the of the Data-PASS standard deposit terms. A copy of the usage agreement is included in the file section of this study.; Subject: STANDARD DEPOSIT TERMS 1.0 Type: DATAPASS:TERMS:STANDARD:1.0 Notes: This study was deposited under the of the Data-PASS standard deposit terms. A copy of the usage agreement is included in the file section of this study.;
DOI: 10.15468/dl.bm8ph6
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Jamesbrittenia foliolosa",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 92 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019386-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/huqdfi
title: A REBCO Persistent-Current Switch, Immersed in Solid Nitrogen, Operating at Temperatures near 10 K

description: We present design and test results for a thermally-activated persistent-current switch (PCS) applied to a double pancake (DP) coil (151 mm ID, 172 mm OD), wound, using the no-insulation (NI) technique, from a 120-m long, 76-µm thick, 6-mm wide REBCO tape. For the experiments reported in this paper, the NI DP assembly was immersed in a volume of solid nitrogen (SN2), cooled to a base temperature of 10 K by conduction to a two-stage cryocooler, and energized at up to 630 A. The DP assembly operated in quasi-persistent mode, with the conductor tails soldered together to form a close-out joint with resistance below 6 nΩ. The measurements confirm PCS activation at heating powers below our 1-W design target, and a field decay time constant in excess of 900 h (i.e 0.1%/h field decay rate), limited by the finite resistance of the close-out joint.
description: PSFC REPORT PSFC/JA-17-58<br><br>This work was supported by the National Institute of Biomedical Imaging and Bioengineering of the National Institutes of Health under Grant 5R21EB018924-02.
DOI: 10.7910/dvn/hxgswj
title: Townsend Thai Project Institutional Annual Resurvey, 1998

description: The project is carried out in Thailand under the direction of Khun Sombat Sakuntasathhien and dedicated staff. The project is administered in the United States at the National Opinion Research Center and the University of Chicago. Survey design and research collaborators include Anna Paulson of Northwestern University, Tae Joeng Lee of Yonse University, and Michael Binford of the University of Florida. Robert M. Townsend is overall project director and principal investigator.
&lt;br /&gt;&lt;br /&gt; The initial purpose of the NICHD-NSF funded project was to evaluate the role of informal institutions such as the family and local networks in helping to support the welfare and well-being of individuals in semi-urban and rural areas of Thailand. Risk, and the potentially adverse and direct consequences of household- and firm-specific shocks is a key part of project. The mediating role of the family and social and economic networks in the mobilization of savings and allocation of c
redit was also deemed essential. These networks are not viewed in isolation but rather are part of the larger village, regional, and national level financial system. Thus the project includes an evaluation of village-level financial institutions, such as Production Credit Groups and rice banks, and national-level financial institutions such as commercial banks and the government agricultural bank, the Bank for Agriculture and Agricultural Cooperatives (BAAC).
&lt;br /&gt;&lt;br /&gt; Indeed, the project has both micro and macro aspects. It seeks to evaluate informal and formal financial institutions and markets and to construct and evaluate macro models of growth, fluctuations, and crisis. The macro models are based on the measured micro- underpinnings.&lt;br /&gt;&lt;br /&gt; 161 institutions were surveyed in the initial l997 cross-section survey. In the annual resurveys we checked to see if an institution was pre-existing, but new institutions were added as well. Some i
nstitutions had failed. For example in l998, 45 institutions were sampled in total.
DOI: 10.7910/dvn/hxqwnj
title: Historical building footprint area (BUFA) - gridded surfaces for the conterminous U.S. from 1900 to 2010

description: These files are part of the dataset "Historical building footprint areas (BUFA) - gridded surfaces for the conterminous U.S. from 1900 to 2010", contained in the dataverse “HISDAC-US: Historical Settlement Data Compilation for the United States” (https://dataverse.harvard.edu/dataverse/hisdacus). Each GeoTIFF file contains a geospatial raster layer with pixel values representing the total building footprint area (i.e., the built-up surface in m²) within each 250 m x 250 m grid cell, at 10 years temporal resolution. The .readme file provides additional information on the underlying methodology. Data sources: Microsoft USBuildingFootprints v2019 + Zillow Transaction and Assessment Dataset (ZTRAX, Zillow Inc., v2017).
description: Feature Manipulation Engine, v2020
description: Python, 3.8
description: Historical settlement compilation for the U.S: (HISDAC-US)
DOI: 10.7910/dvn/iebjec
title: Townsend Thai Project Key Informant Annual Resurvey, 2014 (Rural)

description: The project is carried out in Thailand under the direction of Khun Sombat Sakuntasathhien and dedicated staff. The project is administered in the United States at the National Opinion Research Center and the University of Chicago. Survey design and research collaborators include Anna Paulson of Northwestern University, Tae Joeng Lee of Yonse University, and Michael Binford of the University of Florida. Robert M. Townsend is overall project director and principal investigator.
&lt;br /&gt;&lt;br /&gt; The initial purpose of the NICHD-NSF funded project was to evaluate the role of informal institutions such as the family and local networks in helping to support the welfare and well-being of individuals in semi-urban and rural areas of Thailand. Risk, and the potentially adverse and direct consequences of household- and firm-specific shocks is a key part of project. The mediating role of the family and social and economic networks in the mobilization of savings and allocation of c
redit was also deemed essential. These networks are not viewed in isolation but rather are part of the larger village, regional, and national level financial system. Thus the project includes an evaluation of village-level financial institutions, such as Production Credit Groups and rice banks, and national-level financial institutions such as commercial banks and the government agricultural bank, the Bank for Agriculture and Agricultural Cooperatives (BAAC).
&lt;br /&gt;&lt;br /&gt; Indeed, the project has both micro and macro aspects. It seeks to evaluate informal and formal financial institutions and markets and to construct and evaluate macro models of growth, fluctuations, and crisis. The macro models are based on the measured micro- underpinnings.&lt;br /&gt;&lt;br /&gt; For this part of the study, the headman from each village was interviewed.
DOI: 10.7910/dvn/ifmne5
title: Townsend Thai Project Household Annual Resurvey, 2009 (Rural)

description: The project is carried out in Thailand under the direction of Khun Sombat Sakuntasathhien and dedicated staff. The project is administered in the United States at the National Opinion Research Center and the University of Chicago. Survey design and research collaborators include Anna Paulson of Northwestern University, Tae Joeng Lee of Yonse University, and Michael Binford of the University of Florida. Robert M. Townsend is overall project director and principal investigator.
&lt;br/&gt; &lt;br/&gt; The initial purpose of the NICHD-NSF funded project was to evaluate the role of informal institutions such as the family and local networks in helping to support the welfare and well-being of individuals in semi-urban and rural areas of Thailand. Risk, and the potentially adverse and direct consequences of household- and firm-specific shocks is a key part of project. The mediating role of the family and social and economic networks in the mobilization of savings and allocation of cre
dit was also deemed essential. These networks are not viewed in isolation but rather are part of the larger village, regional, and national level financial system. Thus the project includes an evaluation of village-level financial institutions, such as Production Credit Groups and rice banks, and national-level financial institutions such as commercial banks and the government agricultural bank, the Bank for Agriculture and Agricultural Cooperatives (BAAC).
&lt;br/&gt; &lt;br/&gt; Indeed, the project has both micro and macro aspects. It seeks to evaluate informal and formal financial institutions and markets and to construct and evaluate macro models of growth, fluctuations, and crisis. The macro models are based on the measured micro- underpinnings. &lt;br/&gt; &lt;br/&gt; Household Resampling. Every effort is made to resurvey previously interviewed households. In l998 we successfully reinterviewed 95.32% of the l997 target, previously- surveyed population. In l999 we re
surveyd 97% of the l997 target. Most of the attrition is to due to the household having moved out of the village, though a handful have refused to be interviewed, and a third cause is death of the head. If in any year we are short of the target 15 households per village, we include random replacements, for the purpose of constructing village average variables, for example.
&lt;br/&gt; More details about the Townsend Thai Project are available at http://cier.uchicago.edu/
DOI: 10.7910/dvn/ihgspw
title: Townsend Thai Project Household Annual Resurvey, 2016 (Rural)

description: The project is carried out in Thailand under the direction of Khun Sombat Sakuntasathhien and dedicated staff. The project is administered in the United States at the National Opinion Research Center and the University of Chicago. Survey design and research collaborators include Anna Paulson of Northwestern University, Tae Joeng Lee of Yonse University, and Michael Binford of the University of Florida. Robert M. Townsend is overall project director and principal investigator.
&lt;br/&gt; &lt;br/&gt; The initial purpose of the NICHD-NSF funded project was to evaluate the role of informal institutions such as the family and local networks in helping to support the welfare and well-being of individuals in semi-urban and rural areas of Thailand. Risk, and the potentially adverse and direct consequences of household- and firm-specific shocks is a key part of project. The mediating role of the family and social and economic networks in the mobilization of savings and allocation of cre
dit was also deemed essential. These networks are not viewed in isolation but rather are part of the larger village, regional, and national level financial system. Thus the project includes an evaluation of village-level financial institutions, such as Production Credit Groups and rice banks, and national-level financial institutions such as commercial banks and the government agricultural bank, the Bank for Agriculture and Agricultural Cooperatives (BAAC).
&lt;br/&gt; &lt;br/&gt; Indeed, the project has both micro and macro aspects. It seeks to evaluate informal and formal financial institutions and markets and to construct and evaluate macro models of growth, fluctuations, and crisis. The macro models are based on the measured micro- underpinnings. &lt;br/&gt; &lt;br/&gt; Household Resampling. Every effort is made to resurvey previously interviewed households. In l998 we successfully reinterviewed 95.32% of the l997 target, previously- surveyed population. In l999 we re
surveyd 97% of the l997 target. Most of the attrition is to due to the household having moved out of the village, though a handful have refused to be interviewed, and a third cause is death of the head. If in any year we are short of the target 15 households per village, we include random replacements, for the purpose of constructing village average variables, for example.
&lt;br/&gt; More details about the Townsend Thai Project are available at http://cier.uchicago.edu/
DOI: 10.7910/dvn/ije2pc
title: Bachpan Study of Maternal Depression and Child Development: Data from the First Three Years
title: {Note: If you download our data and plan to use this for a publication or abstract, please contact us so we can keep a record of specific use cases}

description: The Bachpan (meaning “childhood” in Urdu) project is a pregnancy cohort with an embedded cluster-randomized control trial of a maternal depression intervention, the Thinking Healthy Program- Peer Delivered Plus (THPP+). This project takes place in rural Pakistan and includes extensive longitudinal measures of maternal health, child health, and family environment characteristics (e.g., socioeconomic status, interpersonal violence, parenting).

Participants included 1,154 mothers recruited during their third trimester of pregnancy. Mothers were screened for depression using the Patient Health Questionnaire-9 (PHQ-9). Those who screened positive for depression (PHQ score 10 or greater) were randomly assigned to receive the THPP+ (n = 283) or enhanced usual care (EUC; n = 287). Additionally, a sample of women who screened negative for depression were recruited (n = 584). Participants were followed from their third trimester of pregnancy through child age 36 months, with assessments at baseline (pregnancy), 3 months, 6 months, 12 months, 24 months, and 36 months postpartum (Turner et al., 2016; Sikander et al., 2019).

Results show variable effects of the THPP+ intervention at 36 months (Maselko, Sikander, et al., 2020; Sevim et al, 2023).  Additionally, observational work with this dataset has shown that there are many social and environmental factors, such as social support and socioeconomic status, that impact maternal and child health. A full list of publications from this study can be found at https://www.bachpanstudy.com/ Overall, findings suggest sustained impacts of the THPP+ intervention and point to the importance of long-term, multifaceted assessments of maternal and child well-being.
DOI: 10.7910/dvn/ijoudg
title: Supporting Data for "DFCP1 is a Regulator of Starvation-driven ATGL-mediated Lipid Droplet Lipolysis"

description: The Data Sets include: (1) Densities and Diameters of Lipid Droplets recorded from unedited and DFCP1 CRISPR/CAS9 KO Hep3B cells treated with small molecule inhibitors for DGAT, ATGL and LAL; (2) Individual Fluorescence Recovery After Photobleaching Traces; (3) Lipidomics of LD from Fed and Starved WT and DFCP1 KO U2OS cells; (4) Lipidomics of LDs used in the Lipidomic Rate Assay.
DOI: 10.7910/dvn/ijuuhj
title: Skin P01
title: Program Project Grant

description: This Program Project Grant aims to (1) map key metabolomic, epigenetic and cell receptor stem cell pathways that drive age-related wound healing dysfunction; (2) identify therapeutically accessible nodes for stem-cell directed multicomponent combinatorial targeting within these pathways; and (3) discover agents that will likely affect the restoration of more robust and regenerative stem cell-driven responses to wound healing and physiologic maintenance and health.
DOI: 10.7910/dvn/innmpe
title: Townsend Thai Project Key Informant Annual Resurvey, 2001

description: The project is carried out in Thailand under the direction of Khun Sombat Sakuntasathhien and dedicated staff. The project is administered in the United States at the National Opinion Research Center and the University of Chicago. Survey design and research collaborators include Anna Paulson of Northwestern University, Tae Joeng Lee of Yonse University, and Michael Binford of the University of Florida. Robert M. Townsend is overall project director and principal investigator.
&lt;br /&gt;&lt;br /&gt; The initial purpose of the NICHD-NSF funded project was to evaluate the role of informal institutions such as the family and local networks in helping to support the welfare and well-being of individuals in semi-urban and rural areas of Thailand. Risk, and the potentially adverse and direct consequences of household- and firm-specific shocks is a key part of project. The mediating role of the family and social and economic networks in the mobilization of savings and allocation of c
redit was also deemed essential. These networks are not viewed in isolation but rather are part of the larger village, regional, and national level financial system. Thus the project includes an evaluation of village-level financial institutions, such as Production Credit Groups and rice banks, and national-level financial institutions such as commercial banks and the government agricultural bank, the Bank for Agriculture and Agricultural Cooperatives (BAAC).
&lt;br /&gt;&lt;br /&gt; Indeed, the project has both micro and macro aspects. It seeks to evaluate informal and formal financial institutions and markets and to construct and evaluate macro models of growth, fluctuations, and crisis. The macro models are based on the measured micro- underpinnings.&lt;br /&gt;&lt;br /&gt; For this part of the study, the headman from each village was interviewed.
DOI: 10.7910/dvn/iuaugj
title: Replication data for: Human presenilin-1 delivered by AAV9 rescues impaired γ-secretase activity, memory deficits, and neurodegeneration in Psen mutant mice

description: This data set contains raw data related to the manuscript entitled “Human Presenilin-1 Delivered by AAV9 Rescues Impaired gamma-Secretase Activity, Memory Deficits, and Neurodegeneration in Psen Mutant Mice”.