cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7910/dvn/rcasjz
title: Replication Data for: Fungal endophyte association with Brachiaria grasses and its influence on plant water status, total non-structural carbohydrates and biomass production under drought stress

description: The purpose of the data was to gain an understanding of the effect of fungal endophyte on responses of selected Brachiaria cultivars under well-watered and drought conditions. The study was to answer the question as to whether symbiotic association of Brachiaria grasses with fungal endophyte (Acremonium implicatum synonym Sarocladium implicatum) improves plant growth and tolerance to drought stress. This was approached by measuring:
• Plant water status, determining as leaf relative water contents (RWC)
• Leaf dry matter contents (DMC) 
• Total non-structural carbohydrate (NSC) contents
• Biomass
The subject areas of the study involved plant-microbe interactions, plant physiology/biochemistry and plant ecology
description: Funded by the Swedish International Development Cooperation Agency (Sida) through Biosciences eastern and central Africa-International Livestock Research Institute, BecA-ILRI (Nairobi, Kenya)
DOI: 10.7910/dvn/rim1yj
title: Modes of Large-Scale Brain Network Organization during Threat Processing and Posttraumatic Stress Disorder Symptom Reduction during TF-CBT among Adolescent Girls

description: This file includes the network organization, treatment outcome, and covariate data, as well as the matlab code, that produced the results in the PLOS one article.
DOI: 10.7910/dvn/rsgv4q
title: Replication data for: Price Points and Price Rigidity

description: Volume 93, Issue 4
DOI: 10.7910/dvn/vjkd8h
title: Replication Data for: Determinants of top personal income tax rates in 19 OECD countries, 1981–2018

description: This article aims to map the political economy of top personal income tax rate setting. A much-discussed driving factor of top rate setting is the corporate tax rate: governments may prefer to limit the differential between both rates in order to prevent tax-friendly saving of labour incomes inside corporations. Recent studies have highlighted several other driving factors, including budgetary pressure, partisan politics and societal fairness norms. I compare these and other potential determinants in the long run (1981–2018) by studying tax reforms of 226 cabinets in 19 advanced OECD countries using regression models. I find little evidence for the effects of economic, political and institutional factors; instead, the main determinant of the top rate is the corporate tax rate. As corporate tax rates are still declining under competitive pressure, the recently set minimum rate of 15% will not stop tax competition from constraining progressive income taxation.
DOI: 10.7910/dvn/xcnljz
title: Up/Down Impurity Density Asymmetries in C-Mod Plasmas

description: Brightness profiles of x-ray emission from H-like Ar17+ exhibit a distinct up/down asymmetry under certain operating conditions in C-Mod plasmas, indicating that impurity densities are not constant on flux surfaces with r/a between ~0.8 and ~0.95. In L- and I-mode plasmas, there is an x-ray brightness excess, up to a factor of 8, on the side opposite to the ion BxgradB drift direction. This effect is not observed in H-mode plasmas, presumably due to edge impurity transport being dominated by a strong inward pinch, which is absent in L- and I-mode. The magnitude of the asymmetry in L- and I-mode decreases with increasing plasma current, similar to the observed decrease in radial impurity diffusivity. In I-mode, where the codependence between electron density and temperature can be broken with ICRF heating power, the asymmetry magnitude is found to decrease with increasing density and with increasing edge temperature at fixed density. These measurements exhibit some qualitative features of neo-classical expectations but the observed asymmetry magnitude is much larger than predicted and some scalings with plasma parameters are not seen. The up/down asymmetry appears to be largest when the cross field impurity diffusivity is the highest.
description: PSFC REPORT PSFC/JA-18-48<br><br>US DoE Contract No. De-FC02-99ER54512
DOI: 10.15468/dl.rx45v9
title: Occurrence Download

description: A dataset containing 115763 records in GBIF matching the query:
SELECT
 '544' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= 56.135291543055025
 AND decimalLatitude &lt;= 61.2993700571118
 AND decimalLongitude &gt;= 14.391020376704889
 AND decimalLongitude &lt;= 23.73127302141519
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 115763 records were derived from 339 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004968-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31176290
title: Additional file 1 of Integrin activation by two independently regulated calcium-mediated pathways is required for neutrophil recruitment

description: Supplementary Material 1: Supplemental Fig. 1 Expression of Ca2+ isoforms in neutrophils. Determination of Ca2+ isoforms via immunoblotting from control and (A-B) STIM1-KO = STIM1LysM-Cre+, (C-D) ORAI1-KO =ORAI1LysM-Cre+, (E-G) STIM1/2-KO = STIM1/2LysM-Cre+, (H-J) STIM1/ORAI1-KO = STIM1/ORAI1LysM-Cre+, (K-L) STIM2-KO = STIM2LysM-Cre+ and (M-N) ORAI2-KO = ORAI2LysM-Cre+ neutrophils. Lysates were immunoblotted with (A, E, H) anti-STIM1, (C, H) anti-ORAI1, (E, K) anti-STIM2, (M) anti-ORAI2 and (A, C, E, H, K, M) anti-GAPDH, n=3, experimental repeat. Representative Western blot images are cropped. Data are mean ± SEM. *p&lt;0.05, **p&lt;0.01, ****p&lt;0.0001 by one-way ANOVA. Supplemental Fig. 2. Calcium is required CXCL-1-induced CD11a activation. (A, B, C, F, G, H) Binding of fluorescently coupled β2-integrin ligands in unstimulated or CXCL-1 stimulated neutrophils. ICAM-1 binding to control neutrophils in presence of IgG or blocking anti-CD11a or anti-CD11b antibodies was assessed by flow cytometry, n=3, experimental repeat. In (B, C) control and Rap1a-KO = Rap1a-/- neutrophils binding of fluorescently coupled β2-integrin ligands (B) ICAM-1 and (C) fibrinogen was assessed by flow cytometry, n=3-4, experimental repeat. Intracellular calcium levels were analyzed in Fluo-4 labeled control neutrophils, incubated with either DMSO, (D) BAPTA or (E) thapsigargin before and after CXCL-1 stimulation. Binding of fluorescent coupled β2-integrin ligands (F, G) ICAM-1 and (H, I) fibrinogen to control neutrophils, incubated with either DMSO (control), (F, H) BAPTA or (G, I) thapsigargin was assessed by flow cytometry, n=3-5, experimental repeat. Data are mean ± SEM. *p&lt;0.05, **p&lt;0.01,***p&lt;0.001, ****p&lt;0.0001, ns=non significant by one-way ANOVA. Supplemental Fig. 3. Neutrophil recruitment depends on STIM1 and ORAI1. Control and (A, G, H) STIM1-KO = STIM1LysM-Cre+, (B, I, J) ORAI1-KO = ORAI1LysM-Cre+, (C, K, L) STIM1/2-KO = STIM1/2LysM-Cre+, (D, M, N) STIM1/ORAI1-KO = STIM1/ORAI1LysM-Cre+, (E, O, P) STIM2-KO = STIM2LysM-Cre+, (F, Q, R) ORAI2-KO = ORAI2LysM-Cre+ and (S, T, U) control LysMCre+ and ORAI1-KO = ORAI1LysM-Cre+ mice were injected intrascrotally with TNF-𝛼 (2h) and analyzed for leukocyte recruitment. Representative postcapillary cremaster muscle venules were analyzed for (A-F + S) neutrophil rolling velocity and (G, I, K, M, O, Q, T) the number of adherent neutrophils. (H, J, L, N, P, R, U) Leukocyte transmigration was visualized using reflected light oblique transillumination microscopy (RLOT) and examined for the number of emigrated cells, n=3, number of mice. (V) In control, LysMcre+ and ORAI1-KO = ORAI1LysMcre+ neutrophils, either unstimulated or stimulated with CXCL-1, binding of fluorescently coupled β2-integrin ligand ICAM-1 was assessed by flow cytometry, n=3, experimental repeat. Data are mean ± SEM. *p&lt;0.05, **p&lt;0.01, ***p&lt;0.0001, ns=non significant by one-way ANOVA.
DOI: 10.6084/m9.figshare.31176290.v1
title: Additional file 1 of Integrin activation by two independently regulated calcium-mediated pathways is required for neutrophil recruitment

description: Supplementary Material 1: Supplemental Fig. 1 Expression of Ca2+ isoforms in neutrophils. Determination of Ca2+ isoforms via immunoblotting from control and (A-B) STIM1-KO = STIM1LysM-Cre+, (C-D) ORAI1-KO =ORAI1LysM-Cre+, (E-G) STIM1/2-KO = STIM1/2LysM-Cre+, (H-J) STIM1/ORAI1-KO = STIM1/ORAI1LysM-Cre+, (K-L) STIM2-KO = STIM2LysM-Cre+ and (M-N) ORAI2-KO = ORAI2LysM-Cre+ neutrophils. Lysates were immunoblotted with (A, E, H) anti-STIM1, (C, H) anti-ORAI1, (E, K) anti-STIM2, (M) anti-ORAI2 and (A, C, E, H, K, M) anti-GAPDH, n=3, experimental repeat. Representative Western blot images are cropped. Data are mean ± SEM. *p&lt;0.05, **p&lt;0.01, ****p&lt;0.0001 by one-way ANOVA. Supplemental Fig. 2. Calcium is required CXCL-1-induced CD11a activation. (A, B, C, F, G, H) Binding of fluorescently coupled β2-integrin ligands in unstimulated or CXCL-1 stimulated neutrophils. ICAM-1 binding to control neutrophils in presence of IgG or blocking anti-CD11a or anti-CD11b antibodies was assessed by flow cytometry, n=3, experimental repeat. In (B, C) control and Rap1a-KO = Rap1a-/- neutrophils binding of fluorescently coupled β2-integrin ligands (B) ICAM-1 and (C) fibrinogen was assessed by flow cytometry, n=3-4, experimental repeat. Intracellular calcium levels were analyzed in Fluo-4 labeled control neutrophils, incubated with either DMSO, (D) BAPTA or (E) thapsigargin before and after CXCL-1 stimulation. Binding of fluorescent coupled β2-integrin ligands (F, G) ICAM-1 and (H, I) fibrinogen to control neutrophils, incubated with either DMSO (control), (F, H) BAPTA or (G, I) thapsigargin was assessed by flow cytometry, n=3-5, experimental repeat. Data are mean ± SEM. *p&lt;0.05, **p&lt;0.01,***p&lt;0.001, ****p&lt;0.0001, ns=non significant by one-way ANOVA. Supplemental Fig. 3. Neutrophil recruitment depends on STIM1 and ORAI1. Control and (A, G, H) STIM1-KO = STIM1LysM-Cre+, (B, I, J) ORAI1-KO = ORAI1LysM-Cre+, (C, K, L) STIM1/2-KO = STIM1/2LysM-Cre+, (D, M, N) STIM1/ORAI1-KO = STIM1/ORAI1LysM-Cre+, (E, O, P) STIM2-KO = STIM2LysM-Cre+, (F, Q, R) ORAI2-KO = ORAI2LysM-Cre+ and (S, T, U) control LysMCre+ and ORAI1-KO = ORAI1LysM-Cre+ mice were injected intrascrotally with TNF-𝛼 (2h) and analyzed for leukocyte recruitment. Representative postcapillary cremaster muscle venules were analyzed for (A-F + S) neutrophil rolling velocity and (G, I, K, M, O, Q, T) the number of adherent neutrophils. (H, J, L, N, P, R, U) Leukocyte transmigration was visualized using reflected light oblique transillumination microscopy (RLOT) and examined for the number of emigrated cells, n=3, number of mice. (V) In control, LysMcre+ and ORAI1-KO = ORAI1LysMcre+ neutrophils, either unstimulated or stimulated with CXCL-1, binding of fluorescently coupled β2-integrin ligand ICAM-1 was assessed by flow cytometry, n=3, experimental repeat. Data are mean ± SEM. *p&lt;0.05, **p&lt;0.01, ***p&lt;0.0001, ns=non significant by one-way ANOVA.
DOI: 10.6084/m9.figshare.31176311
title: Additional file 5 of Mechanistic insights into Rottlerin’s inhibition of MrkH-mediated biofilm and capsule formation in Klebsiella pneumoniae

description: Supplementary Material 5. (Table S5)
DOI: 10.6084/m9.figshare.31176311.v1
title: Additional file 5 of Mechanistic insights into Rottlerin’s inhibition of MrkH-mediated biofilm and capsule formation in Klebsiella pneumoniae

description: Supplementary Material 5. (Table S5)
DOI: 10.15468/dl.jfjgzy
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dicyemennea brevicephaloides",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004977-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g77465
title: Occurrence Download

description: A dataset containing 2118121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "Year 2024-2026"
 ]
}

 The dataset includes 2118121 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004960-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31176377
title: Additional file 1 of Targeting TRIM59 impairs RNA splicing and promotes neuroblastoma differentiation and therapeutic responses

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.31176377.v1
title: Additional file 1 of Targeting TRIM59 impairs RNA splicing and promotes neuroblastoma differentiation and therapeutic responses

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.31176382
title: Supplementary Material for: Education-Adjusted Interpretation of MMSE for Diagnostic Validity of Cognitive Disorders

description: Introduction 
The Mini-Mental State Examination (MMSE) is widely utilized in clinical settings for cognitive screening, yet its diagnostic accuracy is often influenced by demographic factors such as educational attainment. This study investigates the educational gradient in MMSE performance and evaluates whether uniform cutoff scores adequately distinguish cognitively normal (CN), mild cognitive impairment (MCI), and Alzheimer’s disease (AD) patients across different educational strata.
Methods 
A total of 300 older adults (CN = 100; MCI = 100; AD = 100) were retrospectively recruited from the Severance Hospital memory clinic, intentionally balanced to ensure statistical power and avoid class-imbalance bias across diagnostic groups. All participants completed the Korean version of MMSE and the Seoul Neuropsychological Screening Battery-II (SNSB-II) and underwent 3T brain MRI for hippocampal volumetry. Education level was categorized as low (≤6 years), medium (7–12 years), and high (≥13 years). MMSE diagnostic accuracy was evaluated using ROC curve analyses stratified by education. Interaction effects were tested via multiple linear regression, and correlations with hippocampal volume were assessed.
Results 
MMSE scores showed a significant educational gradient, with higher education associated with higher performance (p &lt; 0.001). MMSE scores demonstrated a pronounced educational gradient, with particularly reduced performance in individuals with low educational attainment, suggesting potential overestimation of cognitive impairment when uniform MMSE cutoffs are applied. ROC analyses revealed only moderate diagnostic accuracy of MMSE in the higher education groups (AUC = 0.83 and 0.78). The AUC was 0.73 (95% CI 0.58–0.88) in the low-education group; the AUC was 0.83 (95% CI 0.75–0.91) in the middle-education group; and 0.78 (95% CI 0.70–0.87) in the high-education group, suggesting only moderate diagnostic accuracy of MMSE. Conversely, lower education groups showed underperformance potentially unrelated to pathology. Regression models confirmed that education and diagnosis had additive but non-interacting effects on MMSE scores. MMSE correlated strongly with hippocampal volume (r = 0.739, p &lt; 0.001), validating its general neuroanatomical relevance.
Conclusion
MMSE performance is substantially modulated by education, with uniform cutoffs yielding differential diagnostic validity across educational strata. We suggest education-adjusted interpretation of MMSE and emphasize the need for integrative diagnostic approaches combining cognitive testing with neuroimaging biomarkers.
DOI: 10.6084/m9.figshare.31176382.v1
title: Supplementary Material for: Education-Adjusted Interpretation of MMSE for Diagnostic Validity of Cognitive Disorders

description: Introduction 
The Mini-Mental State Examination (MMSE) is widely utilized in clinical settings for cognitive screening, yet its diagnostic accuracy is often influenced by demographic factors such as educational attainment. This study investigates the educational gradient in MMSE performance and evaluates whether uniform cutoff scores adequately distinguish cognitively normal (CN), mild cognitive impairment (MCI), and Alzheimer’s disease (AD) patients across different educational strata.
Methods 
A total of 300 older adults (CN = 100; MCI = 100; AD = 100) were retrospectively recruited from the Severance Hospital memory clinic, intentionally balanced to ensure statistical power and avoid class-imbalance bias across diagnostic groups. All participants completed the Korean version of MMSE and the Seoul Neuropsychological Screening Battery-II (SNSB-II) and underwent 3T brain MRI for hippocampal volumetry. Education level was categorized as low (≤6 years), medium (7–12 years), and high (≥13 years). MMSE diagnostic accuracy was evaluated using ROC curve analyses stratified by education. Interaction effects were tested via multiple linear regression, and correlations with hippocampal volume were assessed.
Results 
MMSE scores showed a significant educational gradient, with higher education associated with higher performance (p &lt; 0.001). MMSE scores demonstrated a pronounced educational gradient, with particularly reduced performance in individuals with low educational attainment, suggesting potential overestimation of cognitive impairment when uniform MMSE cutoffs are applied. ROC analyses revealed only moderate diagnostic accuracy of MMSE in the higher education groups (AUC = 0.83 and 0.78). The AUC was 0.73 (95% CI 0.58–0.88) in the low-education group; the AUC was 0.83 (95% CI 0.75–0.91) in the middle-education group; and 0.78 (95% CI 0.70–0.87) in the high-education group, suggesting only moderate diagnostic accuracy of MMSE. Conversely, lower education groups showed underperformance potentially unrelated to pathology. Regression models confirmed that education and diagnosis had additive but non-interacting effects on MMSE scores. MMSE correlated strongly with hippocampal volume (r = 0.739, p &lt; 0.001), validating its general neuroanatomical relevance.
Conclusion
MMSE performance is substantially modulated by education, with uniform cutoffs yielding differential diagnostic validity across educational strata. We suggest education-adjusted interpretation of MMSE and emphasize the need for integrative diagnostic approaches combining cognitive testing with neuroimaging biomarkers.
DOI: 10.6084/m9.figshare.31176388
title: Supplementary Material for: Assessment of Cardiovascular Risk Factors and Selected Echocardiographic Parameters in Male Patients with Psoriasis

description: Background: Psoriasis is associated with an increased risk of cardiovascular disease, including myocardial infarction and coronary artery disease.
Material and methods: This single-centre observational study assessed cardiovascular risk factors in 77 adult male patients with psoriasis compared with a control group. All participants underwent echocardiography to evaluate left ventricular diastolic function.
Results: Patients with psoriasis had a higher body mass index (BMI) (p=0.062), elevated C-reactive protein (CRP) levels (p&lt;0.001), and more frequent hypertension (p=0.001). Past and current smoking was significantly more common in the psoriasis group (p&lt;0.05). Echocardiographic parameters were generally higher in psoriasis patients, particularly the left atrial volume index (LAVI) (median 23.72 vs. 19.5 ml/m²; p&lt;0.01) and left ventricular mass index (LVMI) (median 99.84 vs. 93.70 g/m²; p&lt;0.05). Subclinical cardiac damage occurred more frequently in psoriasis patients (OR=3.37, 95% CI: 1.39–9.1), remaining significant after adjustment for hypertension, smoking, and BMI (OR=2.77, 95% CI: 1.07–7.83). Logistic regression indicated that cardiac damage was associated with age, hypertension, and antihypertensive use. Psoriasis independently increased the risk of subclinical cardiac damage after adjustment for age and hypertension.
Conclusions: Patients with psoriasis should be screened early for cardiovascular disease, and preventive strategies introduced to reduce long-term risk.
DOI: 10.6084/m9.figshare.31176388.v1
title: Supplementary Material for: Assessment of Cardiovascular Risk Factors and Selected Echocardiographic Parameters in Male Patients with Psoriasis

description: Background: Psoriasis is associated with an increased risk of cardiovascular disease, including myocardial infarction and coronary artery disease.
Material and methods: This single-centre observational study assessed cardiovascular risk factors in 77 adult male patients with psoriasis compared with a control group. All participants underwent echocardiography to evaluate left ventricular diastolic function.
Results: Patients with psoriasis had a higher body mass index (BMI) (p=0.062), elevated C-reactive protein (CRP) levels (p&lt;0.001), and more frequent hypertension (p=0.001). Past and current smoking was significantly more common in the psoriasis group (p&lt;0.05). Echocardiographic parameters were generally higher in psoriasis patients, particularly the left atrial volume index (LAVI) (median 23.72 vs. 19.5 ml/m²; p&lt;0.01) and left ventricular mass index (LVMI) (median 99.84 vs. 93.70 g/m²; p&lt;0.05). Subclinical cardiac damage occurred more frequently in psoriasis patients (OR=3.37, 95% CI: 1.39–9.1), remaining significant after adjustment for hypertension, smoking, and BMI (OR=2.77, 95% CI: 1.07–7.83). Logistic regression indicated that cardiac damage was associated with age, hypertension, and antihypertensive use. Psoriasis independently increased the risk of subclinical cardiac damage after adjustment for age and hypertension.
Conclusions: Patients with psoriasis should be screened early for cardiovascular disease, and preventive strategies introduced to reduce long-term risk.
DOI: 10.6084/m9.figshare.31176396
title: Additional file 2 of Regulation of chemical emissions from offshore wind farms: comparative analysis and policy recommendations for the North Sea

description: Supplementary material 2
DOI: 10.6084/m9.figshare.31176396.v1
title: Additional file 2 of Regulation of chemical emissions from offshore wind farms: comparative analysis and policy recommendations for the North Sea

description: Supplementary material 2
DOI: 10.6084/m9.figshare.31176408
title: Additional file 2 of Mechanisms of ulnar collateral ligament injury in baseball: criteria and rationale for return to play — a systematic review

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.31176408.v1
title: Additional file 2 of Mechanisms of ulnar collateral ligament injury in baseball: criteria and rationale for return to play — a systematic review

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.31176416
title: Additional file 2 of Convergent DNA methylation abnormalities at enhancers and bivalent promoters in human growth disorders

description: Supplemental Table 1.
DOI: 10.6084/m9.figshare.31176416.v1
title: Additional file 2 of Convergent DNA methylation abnormalities at enhancers and bivalent promoters in human growth disorders

description: Supplemental Table 1.
DOI: 10.6084/m9.figshare.31176419
title: Additional file 3 of Convergent DNA methylation abnormalities at enhancers and bivalent promoters in human growth disorders

description: Supplemental Table 2.
DOI: 10.6084/m9.figshare.31176419.v1
title: Additional file 3 of Convergent DNA methylation abnormalities at enhancers and bivalent promoters in human growth disorders

description: Supplemental Table 2.