cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive112673.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive112673.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0104355.10fu
title: SH0104355.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive112674.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0104356.10fu
title: SH0104356.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive112674.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive112675.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0104357.10fu
title: SH0104357.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0104358.10fu
title: SH0104358.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive112675.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0104359.10fu
title: SH0104359.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive112676.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive112676.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0104360.10fu
title: SH0104360.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive112677.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive112677.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive112678.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive112678.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.15127676
title: IODP Expedition 395C Natural gamma radiation

description: Natural gamma radiation (NGR) data in the ~0.1 to 3.0 MeV range were measured using eight custom-designed sodium iodide (thallium) [NaI(Tl)] detectors arranged along the core measurement axis at 20 cm intervals. The NGR system uses layers of passive shielding (lead) and active shielding (plastic scintillators and coincidence electronics) to reduce the cosmic-ray signal for low-count analysis of sediment core sections and to obtain the maximum signal-to-noise ratio. Data are reported on a total counts per second basis and the raw spectral files are available as compressed files for later analysis.
DOI: 10.5281/zenodo.15127677
title: IODP Expedition 395C Natural gamma radiation

description: Natural gamma radiation (NGR) data in the ~0.1 to 3.0 MeV range were measured using eight custom-designed sodium iodide (thallium) [NaI(Tl)] detectors arranged along the core measurement axis at 20 cm intervals. The NGR system uses layers of passive shielding (lead) and active shielding (plastic scintillators and coincidence electronics) to reduce the cosmic-ray signal for low-count analysis of sediment core sections and to obtain the maximum signal-to-noise ratio. Data are reported on a total counts per second basis and the raw spectral files are available as compressed files for later analysis.
DOI: 10.5281/zenodo.15132416
title: Data of Structural Analysis of the Oxyluciferin Emitting Species in Aqueous and Luciferase Media
DOI: 10.5281/zenodo.15132417
title: Data of Structural Analysis of the Oxyluciferin Emitting Species in Aqueous and Luciferase Media
DOI: 10.5281/zenodo.15127678
title: IODP Expedition 395C Core orientation

description: Core orientation data were measured downhole during advanced piston corer (APC) coring, either by Minex FlexIT or Icefield MI-5 core orientation tool. These tools measure magnetic strength and orientation, 3-axis accelerometer data, and tool temperature data.
DOI: 10.5281/zenodo.15127679
title: IODP Expedition 395C Core orientation

description: Core orientation data were measured downhole during advanced piston corer (APC) coring, either by Minex FlexIT or Icefield MI-5 core orientation tool. These tools measure magnetic strength and orientation, 3-axis accelerometer data, and tool temperature data.
DOI: 10.5281/zenodo.15127680
title: IODP Expedition 395C Piece log

description: Dataset includes length data for every whole-round piece: bin length, whole-round piece length (measured by curation staff), and both the archive- and working-half piece lengths (optionally measured by scientists).
DOI: 10.5281/zenodo.15127681
title: IODP Expedition 395C Piece log

description: Dataset includes length data for every whole-round piece: bin length, whole-round piece length (measured by curation staff), and both the archive- and working-half piece lengths (optionally measured by scientists).
DOI: 10.5281/zenodo.15127682
title: IODP Expedition 395C Laser height profile (section half)

description: Height profile data were measured on the Section Half Multisensor Logger (SHMSL) by a rangefinding laser and recorded in uncorrected height units in millimeters in CSV files.
DOI: 10.5281/zenodo.15127683
title: IODP Expedition 395C Laser height profile (section half)

description: Height profile data were measured on the Section Half Multisensor Logger (SHMSL) by a rangefinding laser and recorded in uncorrected height units in millimeters in CSV files.
DOI: 10.5281/zenodo.15127685
title: IODP Expedition 395C P-wave velocity caliper (section)

description: P-wave velocity data were measured on undisturbed section halves (JRSO-defined x-axis) and/or discrete cube and cylinder samples (x, y, or z-axis) using pairs of piezoelectric transducers mounted on a caliper system. Report includes P-wave velocity in x, y, and/or z-direction, caliper separation, traveltime between transucers, and first arrival picks.
DOI: 10.5281/zenodo.15127686
title: IODP Expedition 395C P-wave velocity caliper (section)

description: P-wave velocity data were measured on undisturbed section halves (JRSO-defined x-axis) and/or discrete cube and cylinder samples (x, y, or z-axis) using pairs of piezoelectric transducers mounted on a caliper system. Report includes P-wave velocity in x, y, and/or z-direction, caliper separation, traveltime between transucers, and first arrival picks.
DOI: 10.5281/zenodo.15132455
title: Twitter dataset during COVID-19 pandemic

description: IDs of tweets collected from Twitter for the analysis published in Cekini, Kamer, et al. "Social Isolation, Digital Connection: COVID-19’s Impact on Twitter Ego Networks." International Conference on Discovery Science. Cham: Springer Nature Switzerland, 2024.The dataset spans across 7 years, form 2016-03-01 to 2022-03-01
DOI: 10.5281/zenodo.15132456
title: Twitter dataset during COVID-19 pandemic

description: IDs of tweets collected from Twitter for the analysis published in Cekini, Kamer, et al. "Social Isolation, Digital Connection: COVID-19’s Impact on Twitter Ego Networks." International Conference on Discovery Science. Cham: Springer Nature Switzerland, 2024.The dataset spans across 7 years, form 2016-03-01 to 2022-03-01
DOI: 10.5281/zenodo.15127687
title: IODP Expedition 395C P-wave velocity logger (whole round)

description: P-wave velocity data were measured on whole-round sections on the Whole-Round Multisensor Logger (WRMSL) using pairs of piezoelectric transducers mounted on a caliper system. Measurements may be affected by degassing of pore fluid and microfracturing during core recovery. Report includes P-wave velocity in x-y plane and distance and traveltime between transducers.
DOI: 10.5281/zenodo.15127688
title: IODP Expedition 395C P-wave velocity logger (whole round)

description: P-wave velocity data were measured on whole-round sections on the Whole-Round Multisensor Logger (WRMSL) using pairs of piezoelectric transducers mounted on a caliper system. Measurements may be affected by degassing of pore fluid and microfracturing during core recovery. Report includes P-wave velocity in x-y plane and distance and traveltime between transducers.
DOI: 10.5281/zenodo.15127691
title: IODP Expedition 395C Portable X-ray fluorescence (p-XRF)

description: Energy-Dispersive X-Ray Fluorescence (ED-XRF) is a rapid, non-destructive technique for determining qualitative and quantitative changes in chemical composition. Aboard the JOIDES Resolution, pXRF is used for measuring points on section halves, rock pieces, and sometimes powders. Spots are typically irradiated at multiple conditions to excite and measure a wide range of elements. The peak intensity changes (we do not provide concentrations) are then used to help recognize and define major chemo-stratigraphic units without the need for destructive sampling.
DOI: 10.5281/zenodo.15127692
title: IODP Expedition 395C Portable X-ray fluorescence (p-XRF)

description: Energy-Dispersive X-Ray Fluorescence (ED-XRF) is a rapid, non-destructive technique for determining qualitative and quantitative changes in chemical composition. Aboard the JOIDES Resolution, pXRF is used for measuring points on section halves, rock pieces, and sometimes powders. Spots are typically irradiated at multiple conditions to excite and measure a wide range of elements. The peak intensity changes (we do not provide concentrations) are then used to help recognize and define major chemo-stratigraphic units without the need for destructive sampling.
DOI: 10.5281/zenodo.15127693
title: IODP Expedition 395C RGB channels (calculated from core photos)

description: Red, green, and blue pixel data were extracted from Section Half Imaging Logger (SHIL) linescan images, typically binned at 0.5 cm resolution using the central 2 cm of the image.
DOI: 10.5281/zenodo.15127694
title: IODP Expedition 395C RGB channels (calculated from core photos)

description: Red, green, and blue pixel data were extracted from Section Half Imaging Logger (SHIL) linescan images, typically binned at 0.5 cm resolution using the central 2 cm of the image.
DOI: 10.5281/zenodo.15127697
title: IODP Expedition 395C Salinity

description: Salinity was measured on interstitial water (IW) samples using an optical refractometer.
DOI: 10.5281/zenodo.15127698
title: IODP Expedition 395C Salinity

description: Salinity was measured on interstitial water (IW) samples using an optical refractometer.
DOI: 10.5281/zenodo.15127695
title: IODP Expedition 395C Color reflectance

description: Color reflectance data were measured on section halves using an integration sphere and a UV-VIS spectrophotometer mounted on the Section Half Multisensor Logger (SHMSL). Spectral counts are recorded in the range of 380 to 700 nm, covering the visible spectrum, and binned in ~2 nm bins. Spectral data are reduced from spectra and recorded in tristimulus XYZ values, CieLAB L*a*b* values, and other units.
DOI: 10.5281/zenodo.15127696
title: IODP Expedition 395C Color reflectance

description: Color reflectance data were measured on section halves using an integration sphere and a UV-VIS spectrophotometer mounted on the Section Half Multisensor Logger (SHMSL). Spectral counts are recorded in the range of 380 to 700 nm, covering the visible spectrum, and binned in ~2 nm bins. Spectral data are reduced from spectra and recorded in tristimulus XYZ values, CieLAB L*a*b* values, and other units.
DOI: 10.5281/zenodo.15127705
title: IODP Expedition 395C Spectrophotometry

description: Interstitial water constitutents were measured by UV-VIS spectrometry using colorimetric methods (e.g., ammonium, nitrate, nitrite, phosphate, silica, and sulfide) by an Agilent CARY 100 UV-VIS spectrophotometer.
DOI: 10.5281/zenodo.15127706
title: IODP Expedition 395C Spectrophotometry

description: Interstitial water constitutents were measured by UV-VIS spectrometry using colorimetric methods (e.g., ammonium, nitrate, nitrite, phosphate, silica, and sulfide) by an Agilent CARY 100 UV-VIS spectrophotometer.
DOI: 10.5281/zenodo.15127699
title: IODP Expedition 395C Sample report

description: Report includes detailed information about samples taken for testing: location/depth, type/form factor, test, request number, and database identifier.
DOI: 10.5281/zenodo.15127700
title: IODP Expedition 395C Sample report

description: Report includes detailed information about samples taken for testing: location/depth, type/form factor, test, request number, and database identifier.
DOI: 10.5281/zenodo.15127703
title: IODP Expedition 395C Section summary

description: Report includes data for individual core sections: coring/drilling depths and recovery, database identifiers for the whole section and section halves, and number of samples taken from the section before and after splitting.
DOI: 10.5281/zenodo.15127704
title: IODP Expedition 395C Section summary

description: Report includes data for individual core sections: coring/drilling depths and recovery, database identifiers for the whole section and section halves, and number of samples taken from the section before and after splitting.
DOI: 10.5281/zenodo.15127710
title: IODP Expedition 395C Thermal conductivity

description: Thermal conductivity was measured using the heated needle method in either full-space needle configuration (soft/saturated sediments) or half-space needle configuration (harder materials) of a TeKa Berlin TK-04 thermal conductivity meter. Heat is applied to the sample and then thermal equilibrium is sought. The heating and equilibration curve is reduced to derive the thermal conductivity value. Raw data are stored if a user wishes to do off-line or postexpedition reduction.
DOI: 10.5281/zenodo.15127711
title: IODP Expedition 395C Thermal conductivity

description: Thermal conductivity was measured using the heated needle method in either full-space needle configuration (soft/saturated sediments) or half-space needle configuration (harder materials) of a TeKa Berlin TK-04 thermal conductivity meter. Heat is applied to the sample and then thermal equilibrium is sought. The heating and equilibration curve is reduced to derive the thermal conductivity value. Raw data are stored if a user wishes to do off-line or postexpedition reduction.
DOI: 10.5281/zenodo.15127712
title: IODP Expedition 395C Thin section images

description: Hard rock and sediment thin section images were acquired using either the JRSO-developed Petrographic Image Capture and Archival Tool (PICAT) imager or (rarely) an upright microscope and a digital camera. Sample images are acquired in unpolarized, polarized, and/or cross-polarized light. Image files are presented compressed by hole.
DOI: 10.5281/zenodo.15127713
title: IODP Expedition 395C Thin section images

description: Hard rock and sediment thin section images were acquired using either the JRSO-developed Petrographic Image Capture and Archival Tool (PICAT) imager or (rarely) an upright microscope and a digital camera. Sample images are acquired in unpolarized, polarized, and/or cross-polarized light. Image files are presented compressed by hole.
DOI: 10.5281/zenodo.15127707
title: IODP Expedition 395C Magnetic remanence (SRM-longcore)

description: Magnetic remanence was measured on section halves (and rarely on whole-round sections) using a 2G Enterprises 760R cryogenic magnetometer, first as natural remanent magnetization (NRM) and then after demagnetization steps were performed on the samples by alternating field (AF) demagnetizer coils mounted in-line within the instrument.
DOI: 10.5281/zenodo.15127708
title: IODP Expedition 395C Magnetic remanence (SRM-longcore)

description: Magnetic remanence was measured on section halves (and rarely on whole-round sections) using a 2G Enterprises 760R cryogenic magnetometer, first as natural remanent magnetization (NRM) and then after demagnetization steps were performed on the samples by alternating field (AF) demagnetizer coils mounted in-line within the instrument.
DOI: 10.5281/zenodo.15127721
title: IODP Expedition 395C Whole-round core section images

description: Images of the outside of hard rock whole-round sections were acquired using a linescan imager (Section Half Imaging Logger [SHIL]) and a special holder that allows each 90 degree segment of the outer surface to be positioned properly. The images were taken at a resolution of 20 lines/mm (50 micropixels). JRSO staff take these quadrant images and compile them into a side-by-side rollout photograph of the section. Composite images are available as both JPG and TIF image formats. Individual quadrant images are available as JPG images only through this report; contact the IODP-JRSO Data Librarian if quadrant TIF files (~160 MB) are needed.