cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.11583/dtu.14501601.v1
title: Quality controlled precipitation data from a disdrometer installed at on the top of the Risø met mast, Denmark

description: This dataset consists of 1-minute and 20-seconds precipitation measurements observed with a OTT Parsivel2 installed on the top of the tall meteorological mast at DTU Risø campus. The period includes more than 2 years of measurements.
DOI: 10.11583/dtu.14501610
title: Quality controlled precipitation data from a disdrometer installed next to the Risø V52 met mast, Denmark

description: This dataset consists of 20-second precipitation measurements observed with a OTT Parsivel2 installed next to the V52 meteorological mast at DTU Risø campus. The period includes around 8 months of measurements.
DOI: 10.11583/dtu.14501610.v1
title: Quality controlled precipitation data from a disdrometer installed next to the Risø V52 met mast, Denmark

description: This dataset consists of 20-second precipitation measurements observed with a OTT Parsivel2 installed next to the V52 meteorological mast at DTU Risø campus. The period includes around 8 months of measurements.
DOI: 10.5281/zenodo.3949800
title: Investigation of Type I Interferon Responses in ANCA-Associated Vasculitis

description: Type I interferon (IFN) dysregulation is a major contributory factor in the development of several autoimmune diseases, termed type I interferonopathies, and is thought to be the pathogenic link with chronic inflammation in these conditions. Anti-neutrophil cytoplasmic antibody (ANCA)-Associated Vasculitis (AAV) is an autoimmune disease characterised by necrotising inflammation of small blood vessels. The underlying biology of AAV is not well understood, however several studies have noted abnormalities in type I IFN responses. We hypothesised that type I IFN responses are systemically dysregulated in AAV, consistent with features of a type I interferonopathy. To investigate this, we measured the expression of seven interferon regulated genes (IRGs) (<em>ISG15, SIGLEC1, STAT1, RSAD2, IFI27, IFI44L </em>and<em> </em><em>IFIT1</em>) in peripheral blood samples, as well as three type I IFN regulated proteins (CXCL10, MCP-1 and CCL19) in serum samples from AAV patients, healthy controls and disease controls. We found no difference in type I IFN regulated gene or protein expression between AAV patients and healthy controls. Furthermore, IRG and IFN regulated protein expression did not correlate with clinical measurements of disease activity in AAV patients. Thus, we conclude that systemic type I IFN responses are not key drivers of AAV pathogenesis and AAV should not be considered a type I interferonopathy.
description: This work was funded through the Meath Foundation Ireland and the Irish Research Council Government of Ireland Postgraduate Scholarship Programme.
DOI: 10.5281/zenodo.3949799
title: Investigation of Type I Interferon Responses in ANCA-Associated Vasculitis

description: Type I interferon (IFN) dysregulation is a major contributory factor in the development of several autoimmune diseases, termed type I interferonopathies, and is thought to be the pathogenic link with chronic inflammation in these conditions. Anti-neutrophil cytoplasmic antibody (ANCA)-Associated Vasculitis (AAV) is an autoimmune disease characterised by necrotising inflammation of small blood vessels. The underlying biology of AAV is not well understood, however several studies have noted abnormalities in type I IFN responses. We hypothesised that type I IFN responses are systemically dysregulated in AAV, consistent with features of a type I interferonopathy. To investigate this, we measured the expression of seven interferon regulated genes (IRGs) (<em>ISG15, SIGLEC1, STAT1, RSAD2, IFI27, IFI44L </em>and<em> </em><em>IFIT1</em>) in peripheral blood samples, as well as three type I IFN regulated proteins (CXCL10, MCP-1 and CCL19) in serum samples from AAV patients, healthy controls and disease controls. We found no difference in type I IFN regulated gene or protein expression between AAV patients and healthy controls. Furthermore, IRG and IFN regulated protein expression did not correlate with clinical measurements of disease activity in AAV patients. Thus, we conclude that systemic type I IFN responses are not key drivers of AAV pathogenesis and AAV should not be considered a type I interferonopathy.
description: This work was funded through the Meath Foundation Ireland and the Irish Research Council Government of Ireland Postgraduate Scholarship Programme.
DOI: 10.6084/m9.figshare.14511834
title: General Synergic and Distributed Planning Models of Natural Gas and Electricity Systems and Integrated Energy Systems

description: Integrated energy system coupling with multi-energy devices, energy storage systems, and renewable energy systems has been regarded as one of the most promising solutions for future energy systems. A general synergic planning model considering expansion of electricity system, natural gas system, and interior structure and site selection of integrated energy systems is proposed in this paper. Moreover, the joint planning model is decomposed into three planning sub-problems to represent different ownership of the three agents, and the alternating direction method of multipliers (ADMM) is adopted to solve the tripartite distributed planning problem. Finally, the effectiveness of the planning method is verified on the updated version of IEEE RTS 24-bus electric system, Belgian 20-node natural gas system, and two assumed integrated energy systems.
DOI: 10.15129/62be4b55-1fc4-42a1-84e7-c893a1197449
title: Data for: "Recent Advances in Engineered Microbial Technologies for the Construction Industry"

description: This dataset (in .csv file formats) contain the records retrieved from SCOPUS database and used for conducting the scoping literature review contained in the research output associated with this data. The data used for plotting the figures (Fig. 2) and the full details of the data summarised in Table 1 within the paper are all provided herein. Also, the search-query used in SCOPUS database for retrieving the respective list of publications considered in this review are presented as described in the ReadMe txt file.
DOI: 10.3886/e139266
title: A Remote Instructor Like Me: Student-Teacher Congruence in Online, High School Courses

description: This project documents the data files and programs used to generate the estimates found in AERA-20-0283 A Remote Instructor Like Me: Student-Teacher Congruence in Online, High School Courses.
DOI: 10.3886/e139266v1
title: A Remote Instructor Like Me: Student-Teacher Congruence in Online, High School Courses

description: This project documents the data files and programs used to generate the estimates found in AERA-20-0283 A Remote Instructor Like Me: Student-Teacher Congruence in Online, High School Courses.
DOI: 10.25387/g3.13218716
title: Supplemental Material for Popowski et al., 2020

description: Files include genomic data for both female and male parent, phenotypic data of the genotyped individuals, and the pedigree structure of the family that was genotyped.
DOI: 10.25387/g3.13218716.v2
title: Supplemental Material for Popowski et al., 2020

description: Files include genomic data for both female and male parent, phenotypic data of the genotyped individuals, and the pedigree structure of the family that was genotyped.
DOI: 10.25387/g3.13218716.v1
title: Supplemental Material for Popowski et al., 2020

description: Files include genomic data for both female and male parent, phenotypic data of the genotyped individuals, and the pedigree structure of the family that was genotyped.
DOI: 10.5281/zenodo.4727984
title: Global Map of Reforestation Potential

description: Global Map of Reforestation Potential
DOI: 10.5281/zenodo.4727987
title: Global Map of Reforestation Potential

description: Global Map of Reforestation Potential
DOI: 10.5285/be40716c1036498cb6b16b0ef25c5535
title: ESA Cloud Climate Change Initiative (Cloud_cci): Obs4MIPs format monthly gridded cloud products from ATSR2 and AATSR, version 3

description: This dataset provides a version of the Cloud_cci ATSR2-AATSRv3 monthly gridded dataset in Obs4MIPs format. The Cloud_cci ATSR2-AATSRv3 dataset (covering 1995-2012) was generated within the Cloud_cci project, which was funded by the European Space Agency (ESA) as part of the ESA Climate Change Initiative (CCI) programme (Contract No.: 4000109870/13/I-NB). This dataset is based on measurements taken by the Along-Track Scanning Radiometer (ATSR-2) on-board the European Remote Sensing Satellite -2 (ERS-2), and by the Advanced Along-Track Scanning Radiometer (AATSR) on-board the Environmental Satellite (Envisat). It contains a variety of cloud properties which were derived employing the Community Cloud retrieval for Climate (CC4CL) retrieval framework. This particular Obs4MIPS product has been generated for inclusion in Obs4MIPs (Observations for Model Intercomparisons Project), which is an activity to make observational products more accessible for climate model intercomparisons. Individual files are provided covering seven cloud variables: Cloud area fraction in atmospheric layer (clCCI); Atmospheric cloud ice content (clivi); Cloud area fraction (cltCCI); Liquid water cloud area fraction in atmospheric layer(clwCCI); Liquid water cloud area fraction (clwtCCI); Atmosphere mass content of cloud condensed water (clwvi); Air pressure at cloud top (pctCCI)
DOI: 10.5285/ff5f152a3f194ab1be33543f291e65cd
title: ESA Cloud Climate Change Initiative (Cloud_cci): Obs4MIPs format monthly gridded cloud products from AVHRR (AVHRR-AM), version 3

description: This dataset provides a version of the Cloud_cci AVHRR-AMv3 monthly gridded dataset in Obs4MIPs format. The Cloud_cci AVHRR-AMv3 dataset (covering 1991-2016) was generated within the Cloud_cci project, which was funded by the European Space Agency (ESA) as part of the ESA Climate Change Initiative (CCI) programme (Contract No.: 4000109870/13/I-NB). This dataset is based on intercalibrated measurements from the Advanced Very High Resolution Radiometer (AVHRR) sensors on-board the NOAA prime morning (AM) satellite NOAA-12,-15,-17, and the EUMETSAT Metop-A satellite. It contains a multi-annual, global dataset of cloud and radiation properties which were derived employing the Community Cloud retrieval for Climate (CC4CL) retrieval framework. This particular Obs4MIPS product has been generated for inclusion in Obs4MIPs (Observations for Model Intercomparisons Project), which is an activity to make observational products more accessible for climate model intercomparisons. Individual files are provided covering seven cloud variables: Cloud area fraction in atmospheric layer (clCCI); Atmospheric cloud ice content (clivi); Cloud area fraction (cltCCI); Liquid water cloud area fraction in atmospheric layer(clwCCI); Liquid water cloud area fraction (clwtCCI); Atmosphere mass content of cloud condensed water (clwvi); Air pressure at cloud top (pctCCI)
DOI: 10.5285/919157930d7447caac6d42e84e377289
title: ESA Cloud Climate Change Initiative (Cloud_cci): Obs4MIPs format monthly gridded cloud products from AVHRR (AVHRR-PM), version 3

description: This dataset provides a version of the Cloud_cci AVHRR-PMv3 monthly gridded dataset in Obs4MIPs format. The Cloud_cci AVHRR-PMv3 dataset (covering 1982-2016) was generated within the Cloud_cci project, which was funded by the European Space Agency (ESA) as part of the ESA Climate Change Initiative (CCI) programme (Contract No.: 4000109870/13/I-NB). This dataset is based on intercalibrated measurements from the Advanced Very High Resolution Radiometer (AVHRR) sensors on-board the NOAA prime afternoon (PM) satellite NOAA-7,-9,11,-14,-16,-18,-19 satellites. It contains a multi-annual, global dataset of cloud and radiation properties which were derived employing the Community Cloud retrieval for Climate (CC4CL) retrieval framework. This particular Obs4MIPS product has been generated for inclusion in Obs4MIPs (Observations for Model Intercomparisons Project), which is an activity to make observational products more accessible for climate model intercomparisons. Individual files are provided covering seven cloud variables: Cloud area fraction in atmospheric layer (clCCI); Atmospheric cloud ice content (clivi); Cloud area fraction (cltCCI); Liquid water cloud area fraction in atmospheric layer(clwCCI); Liquid water cloud area fraction (clwtCCI); Atmosphere mass content of cloud condensed water (clwvi); Air pressure at cloud top (pctCCI)
DOI: 10.5281/zenodo.4727988
title: Global Map of Reforestation Potential

description: Global Map of Reforestation Potential
DOI: 10.25345/c57r6j
title: MassIVE MSV000087338 - Proteomic analysis of T-lymphocytes, WT and after TTN gene silencing
title: LTQ folder: It cointains 16 folders (8 CTRL and 8 siRNA TTN; 4 biological replicates x 2 technical replicates per condition) Q EXA folder: It cointains 16 folders (8 CTRL and 8 siRNA TTN; 4 biological replicates x 2 technical replicates per condition) LCQ DECA XP folder: It cointains 2 folders corresponding to the analysis of proteins from pooled raft fractions. About LTQ and LCQ DECA XP, peptide mixtures were first separated by means of ion-exchange chromatography using seven steps of increasing ammonium chloride concentration (0, 50, 100, 150, 200, 300, and 600 mM). Each salt step was directly loaded onto the reversed phase column and separated with an acetonitrile gradient: eluent A, 0.1% formic acid in water; eluent B, 0.1% formic acid in acetonitrile; the gradient profile was 5% B for 3 min followed by 5 to 50% B within 40 min.
DOI: 10.6084/m9.figshare.14511885
title: Datasets supporting Haloi et al. Communications Biology

description: This file includes datasets used in Haloi et al. - Communications Biology. Title of the manuscript "Structural Basis of Complex Formation Between Mitochondrial Anion Channel VDAC1 and Hexokinase-II".<br>Fig2_PanelA_HMMM.psf, Fig2_PanelA_HMMM_frame_0, Fig2_PanelA_HMMM_frame_200ns: Initial and final, membrane-bound configurations of HKII-N in a representative HMMM MD trajectory. These files can be directly open using VMD.<br><br>Fig2_PanelA_full.psf, Fig2_PanelA_full_frame_200ns.pdb: Final, membrane-bound configurations of HKII-N in a representative full-membrane MD trajectory. These files can be directly opened using VMD.<br><br>Fig2_PanelB.xlsx: Insertion depth of H-anchor residue I2 into the membrane, calculated using the HMMM and full-membrane MD simulations. <br>Fig2_PanelC.xlsx: Insertion depth of the H-anchor residues (1-27) into the membrane, calculated using the full-membrane MD simulation.<br>Fig3_PanelA.xlsx: Tilt angle of the H-anchor, calculated using the BD and MD simulation.<br>Fig3_PanelD.xlsx: X-Y coordinates of the center of mass of H-anchor, calculated using the trajectories from all 100 independent BD replicates.<br><br>Fig3_PanelE_HKV1.psf, Fig3_PanelE_HKV1.pdb: Final configuration membrane-embedded HKII/VDAC1 complex (HKV1). These files can be directly opened using VMD.<br><br>Fig4_PanelB_HKV1.xls: Radius profile of the VDAC1 pore in HKV1.<br><br>Fig4_PanelB_VDAC1.xls: Radius profile of the VDAC1 pore in VDAC1 alone.<br><br>Fig4_PanelD.xlsx: The cumulative net number of channel-crossing events by Chloride and Sodium, tracked over the time course of a representative MD simulation for VDAC1 or the HKV1 complex.<br><br>Fig5_Electrophysilogy.xlsx: Values of our electrophysiology data points. <br><br>Fig6_PanelA.xlsx: X-Y coordinates of the center of mass (C.O.M) of H-anchor, calculated using the trajectories from all 100 independent BD replicates of WT- and S215phosphorylated-VDAC1 system.<br><br>Fig6_PanelB.xlsx: Z-coordinate (perpendicular to the membrane normal) values of VDAC1 residues, calculated using the full-membrane VDAC1-alone MD simulation.<br>
DOI: 10.5281/zenodo.4725378
title: Data repository for: Distributed Acoustic Sensing in Volcano-Glacial Environments – Mount Meager, British Columbia

description: Data used in the publication: "Distributed Acoustic Sensing in Volcano-Glacial Environments – Mount Meager, British Columbia" stack*.h5: the created stack catalog.csv: a catalog of all high-frequency events UTC*.h5: preprocessed data containing the high-frequency events. We applied a linear detrend to this data, a taper of 0.01, a bandpass filter with corner frequencies of 5 and 45 Hz, and the data is decimated to a sampling rate of 100 Hz.
description: This data draws upon research supported by the Government of Canada's New Frontiers in Research Fund (NFRF).
DOI: 10.5281/zenodo.4728016
title: HRDIC dataset of strain localization in shot peened Ni superalloy

description: We used high-resolution digital image correlation (HRDIC) to measure strain distribution at each deformation step near the shot peened surface of a Ni superalloy, deformed in tension at 450 C. To make the DIC analysis possible, we first developed a fine, homogeneous distributed gold speckle pattern by remodelling a thin gold layer previously deposited on the polished sample surface. The gold layer was deposited using an Edwards S150B sputter coater for 4 minutes providing a ~40-45 nm thickness gold layer. Then, the sample was placed in the heating plate of the remodelling device for 6 hours at 300 °C. During the remodelling process, water vapour flows onto the surface of the coated material and remodels the gold layer into fine speckles. In order to avoid any possible speckle coarsening during the high temperature tensile testing, the remodelled sample was heated in a furnace at 475 °C for 5 hours and air cooled to stabilise the gold pattern. Due to the required stabilization heat treatment, the average speckle size was 120 nm, which is coarser than in previous studies at room temperature, where no pattern thermal stabilization is needed.<br> We used a FEI Magellan HR 400L FE-SEM with a theoretical resolution of ≤ 0.9 nm at &lt;1kV to take backscattered electron images of the pattern. The images were obtained at a working distance of 3.5 mm, 5 kV and 0.8 nA beam current. Mosaics of 30x15 images were used to cover 950x420 squared microns, an area shown area in Fig. 1). Each image contains 2048 x 1768 pixels and has a horizontal field of view of 43 microns. The images were overlapped by 20% to enable easy stitching prior to the digital image correlation. We obtained 7 mosaics, one before tensile testing and 6 after each deformation step.<br> The mosaics for the un-deformed and deformed state were correlated using LaVision’s digital image correlation (DIC) software (version DaVis 8.3). The correlation was performed using a sub-window size of 1616 pixels and no overlap, which provides a spatial resolution of about 335 nm. This resolution allowed us to handle the large data sets generated when covering such large areas (each mosaic was 45.5k x 20k pixels in size). The correlation produces full-field in-plane displacement maps u(x1, x2, 0) on the plane x1x2 with normal x3. Code for reading and visualizing this data is available here: https://doi.org/10.5281/zenodo.4727939. The shear strain data is also provided as a python dictionary saved as a NumPy array. Visualization previews are given as .png and .gif files.
DOI: 10.5281/zenodo.4728015
title: HRDIC dataset of strain localization in shot peened Ni superalloy

description: We used high-resolution digital image correlation (HRDIC) to measure strain distribution at each deformation step near the shot peened surface of a Ni superalloy, deformed in tension at 450 C. To make the DIC analysis possible, we first developed a fine, homogeneous distributed gold speckle pattern by remodelling a thin gold layer previously deposited on the polished sample surface. The gold layer was deposited using an Edwards S150B sputter coater for 4 minutes providing a ~40-45 nm thickness gold layer. Then, the sample was placed in the heating plate of the remodelling device for 6 hours at 300 °C. During the remodelling process, water vapour flows onto the surface of the coated material and remodels the gold layer into fine speckles. In order to avoid any possible speckle coarsening during the high temperature tensile testing, the remodelled sample was heated in a furnace at 475 °C for 5 hours and air cooled to stabilise the gold pattern. Due to the required stabilization heat treatment, the average speckle size was 120 nm, which is coarser than in previous studies at room temperature, where no pattern thermal stabilization is needed.<br> We used a FEI Magellan HR 400L FE-SEM with a theoretical resolution of ≤ 0.9 nm at &lt;1kV to take backscattered electron images of the pattern. The images were obtained at a working distance of 3.5 mm, 5 kV and 0.8 nA beam current. Mosaics of 30x15 images were used to cover 950x420 squared microns, an area shown area in Fig. 1). Each image contains 2048 x 1768 pixels and has a horizontal field of view of 43 microns. The images were overlapped by 20% to enable easy stitching prior to the digital image correlation. We obtained 7 mosaics, one before tensile testing and 6 after each deformation step.<br> The mosaics for the un-deformed and deformed state were correlated using LaVision’s digital image correlation (DIC) software (version DaVis 8.3). The correlation was performed using a sub-window size of 1616 pixels and no overlap, which provides a spatial resolution of about 335 nm. This resolution allowed us to handle the large data sets generated when covering such large areas (each mosaic was 45.5k x 20k pixels in size). The correlation produces full-field in-plane displacement maps u(x1, x2, 0) on the plane x1x2 with normal x3. Code for reading and visualizing this data is available here: https://doi.org/10.5281/zenodo.4727939. The shear strain data is also provided as a python dictionary saved as a NumPy array. Visualization previews are given as .png and .gif files.
DOI: 10.6084/m9.figshare.14511987
title: Betway_PlantTraits_2018.xlsx

description: Functional trait data was collected on 15 species at three sites spanning a latitudinal gradient (Utqiagvik, Atqasuk, and Toolik Lake) in northern Alaska. Data was collected on 10 representative individuals for each species at each region.
DOI: 10.5281/zenodo.4727992
title: Molecular characterization of antimicrobial resistance and virulence genes of bacterial pathogens from bovine and caprine mastitis in Northern Lebanon

description: Table S1. Primer sequences used in PCRs
DOI: 10.5281/zenodo.4727991
title: Molecular characterization of antimicrobial resistance and virulence genes of bacterial pathogens from bovine and caprine mastitis in Northern Lebanon

description: Table S1. Primer sequences used in PCRs
DOI: 10.6084/m9.figshare.14511999
title: 2019_Potter_Towersummary.csv

description: Raw data collect from Potter Tower spray toxicity assays on honey bees.
DOI: 10.6084/m9.figshare.14511999.v1
title: 2019_Potter_Towersummary.csv

description: Raw data collect from Potter Tower spray toxicity assays on honey bees.
DOI: 10.7910/dvn/rhfbrr
title: European Alliances Alignments (1528-1648) V1.0

description: The datasets identify a list of key actors in the European sphere from 1528 to 1648 and introduce two ways of tracking diplomatic shifts in this era. The Formal Military Alliances and Political Settlements dataset (FMAPS) lists all formal treaties and agreements reached between major actors in the European sphere that codified a form of alliance among them--and for which a start and end year could be identified. The Alignments During Armed Conflicts dataset (ADACS) lists parties’ alignments during the period’s major armed conflicts. Both datasets were compiled through review of available literature about diplomatic ententes and armed conflicts throughout the period from 1528 to 1648. The ADACS and FMAPS datasets are presented in both a 'raw' format that lists each instance of an alliance or alignment, and a 'dyads' format that lists each instance of an alliance or alignment between two parties for each year during which it was active.
DOI: 10.34740/kaggle/dsv/2174149
title: YouTube Trending Video Dataset (updated daily)