cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22776017.v1
title: flow cytometry_diapause maintenance data.xlsx

description: These are the data of cell proportions at different cell cycle phase during diapause stage of European corn borer. <br>
DOI: 10.7264/jkfy-2s09
title: Climate Change Maps in the Conservative Media 2012-2020 & Content Analysis
DOI: 10.25824/redu/kdncfj
title: Replication data for: estimating pasture aboveground biomass under an integrated crop-livestock system based on spectral and texture measures derived from UAV images

description: This dataset contains data used to generate results presented in the paper “Estimating aboveground pasture biomass under an integrated crop-livestock system based on spectral and texture measures derived from UAV images (DOI/10.1016/j.compag.2022.107122)”. The research estimated pasture biomass through UAV remote sensing using a multispectral sensor (Micasense Rededge). The study area is in the northwest region of São Paulo State, Brazil. There are 3 UAV orthomosaics from July, August, and November 2019. During the experiment, we collected 181 biomass samples of 1.0 square meter measured by the dry weight in grams (g). The sampled areas had boundaries designed in the orthomosaics (regions of interest). The data files available contain a) dry-weighted pasture biomass (CSV file), b) sampled area boundaries (3 shapefiles), and c) 3 UAV multispectral orthomosaics.
DOI: 10.5066/p9pjsc9s
title: Multi-omics responses in tree swallow (Tachycineta bicolor) nestlings from the Maumee Area of Concern, Maumee River, Ohio

description: Data used in the Maumee River omics publication, Multi-omics responses in tree swallow (Tachycineta bicolor) nestlings from the Maumee Area of Concern, Maumee River, Ohio. Tseng et al. 2023 Sci. Total Environ. 856:159130
DOI: 10.34740/kaggle/dsv/5636103
title: Balochi Language to English Translation Dataset
DOI: 10.6073/pasta/5f2e3306f4b981e9557c527ac55e4d94
title: SBC LTER: Reef: Long-term experiment: Kelp removal: Detritus biomass

description: These data describe the abundance of macroalgal detritus (grams wet mass m-2) within permanent plots of a long-term experiment designed to examine trajectories of change in the structure and productivity of kelp forest communities in response to changes in the frequency and severity of disturbance to giant kelp. Detritus is collected in six permanent 1 m2 quadrats positioned uniformly along 40 m transects in each sampling plot. Sample collections are brought back to the laboratory, identified to species and weighed wet. The kelp disturbance experiment was initiated in 2008 at five reef sites along the mainland coast of the Santa Barbara Channel and included an annual kelp removal treatment designed to simulate increases in the frequency and severity of winter wave disturbance and a continual kelp removal treatment that allowed the effects of giant kelp on the community to be evaluated. Macroalgal detritus is not collected in plots of the continual kelp removal treatment.
DOI: 10.25824/redu/v2xbuo
title: Data on Densitometric parameters.tab
DOI: 10.25824/redu/izdadg
title: Data on Morphometric parameters.tab
DOI: 10.25824/redu/ijqspb
title: Nuclear phenotypes of tenocytes obtained from primary cultures of rat tendon explants

description: The dataset identifies the nuclear phenotypes of tenocytes obtained from primary cultures of rat tendon explants, looking for changes in the global chromatin supraorganization associated to experimental procedures and the cell migration phenomenon. Rat calcaneal tendons isolated from male Wistar rats, and cultivated on different surfaces were used to obtain primary cultures. Cells that migrated from the tendon explant and adhered to the culture surface were employed for establishing the primary culture. In the third culture passage, an aliquot at a concentration of 2.5.10³ cells.mL-¹ was removed and cultivated in 24-well culture plates for 72 h. Thereon, the tenocytes were fixed in an ethanol-acetic acid mixture (3:1, v/v), subjected to the Feulgen reaction and image analysis for characterization of their nuclear phenotypes. These phenotypes were evaluated using parameters obtained in an Olympus microscope model BX51 (Olympus America Center). Images were captured and analyzed using Image-Pro Plus v.6.3 software for Windows™, Media Cybernetics, Inc. (Silver Spring, MD, USA). The software allowed us obtaining nuclear area values, gray averages converted into absorbances (OD), Feret ratio, integrated optical density (IOD) which corresponds to Feulgen-DNA values in arbitrary units, margination, which corresponds to the relative distribution of the IOD in the object, with a value of 0.33 indicating a homogeneous object, and fractal dimension, which informs on the contour of the nucleus.
DOI: 10.6073/pasta/c3e2b351a86a43182ab7d26593c88a92
title: SBC LTER: Reef: Long-term experiment: Kelp removal: Urchin size frequency distribution

description: These data describe the size frequency distribution of red (Mesocentrotus franciscanus) and purple (Strongylocentrotus purpuratus) sea urchins within permanent plots of a long-term experiment designed to examine trajectories of change in the structure and productivity of kelp forest communities in response to changes in the frequency and severity of disturbance to giant kelp. The diameter of the test (shell without spines) is recorded to the nearest 0.5 cm for 50 red and 50 purple sea urchins located within a 40 m x 2 m area of each plot. When combined with size-mass relationships established in the laboratory these data are used to provide a non-destructive, in situ estimate of the dry mass per unit area of bottom for each species. The kelp disturbance experiment was initiated in 2008 at five reef sites along the mainland coast of the Santa Barbara Channel and included an annual kelp removal treatment designed to simulate increases in the frequency and severity of winter wave disturbance and a continual kelp removal treatment that allowed the effects of giant kelp on the community to be evaluated. Size frequency data of red and purple sea urchins are not collected in the continual kelp removal plots.
DOI: 10.6073/pasta/3f1e74328e916c9612ef899e4affa77b
title: Wildlands of New England GIS Data 1900-2022

description: Wildlands in New England is the first U.S. study to map and characterize within one region all conserved lands that, by design, allow natural processes to unfold with no active management or intervention. These “forever wild lands” include federal Wilderness areas along with diverse public and private natural areas and reserves. Knowing the precise locations of Wildlands, their characteristics, and their protection status is important as both a baseline for advancing conservation initiatives and an urgent call to action for supporting nature and society. Wildlands play a unique role in the integrated approach to conservation and land planning advanced by the Wildlands, Woodlands, Farmlands & Communities (WWF&C) initiative, which calls for: at least 70 percent of the region to be protected forest; Wildlands to occupy at least 10 percent of the land; and all existing farmland to be permanently conserved. This research was conducted by WWF&C partners Harvard Forest (Harvard University), Highstead Foundation, and Northeast Wilderness Trust, in collaboration with over one hundred conservation organizations and municipal, state, and federal agencies. This dataset contains the Geographical Information System (GIS) polygon layer of Wildlands created by this project and used in all analyses for the 2023 report. Another GIS layer will be updated as new Wildlands are brought to our attention or created and will be available at https://wildlandsandwoodlands.org/ for researchers.
DOI: 10.34740/kaggle/ds/3240285
title: Vietnamese Job Posting - Vietnamese Version
DOI: 10.6073/pasta/83bdc7ed178a0ee3b5ef9c4c1dd8d614
title: SBC LTER: Reef: Long-term experiment: Kelp removal: Cover of sessile organisms, Uniform Point Contact

description: These data describe the percent cover of sessile invertebrates and understory macroalgae within permanent plots of a long-term experiment designed to examine trajectories of change in the structure and productivity of kelp forest communities in response to changes in the frequency and severity of disturbance to giant kelp. Percent cover is determined using a uniform point contact method that consists of noting the identity and relative vertical position of all organisms under 80 uniformly placed points located within a 1 m wide band centered on permanent 40 m transects in each sampling plot. Each species may only be recorded once per point. Using this method, the percent cover of all species combined may exceed 100%, however, the maximum percent cover possible for any single species cannot exceed 100%. The kelp disturbance experiment was initiated in 2008 at five reef sites along the mainland coast of the Santa Barbara Channel and included an annual kelp removal treatment designed to simulate increases in the frequency and severity of winter wave disturbance and a continual kelp removal treatment that allowed the effects of giant kelp on the community to be evaluated.
DOI: 10.6073/pasta/4ef503ba04292c3c1b2334642f785fec
title: SBC LTER: Reef: Long-term experiment: Kelp removal: Abundance and size of Giant Kelp

description: These data describe the abundance and size of giant kelp (Macrocystis pyrifera) within permanent plots of a long-term experiment designed to examine trajectories of change in the structure and productivity of kelp forest communities in response to changes in the frequency and severity of disturbance to giant kelp. The number of giant kelp &gt; 1 m tall are recorded within four contiguous 20 m x 1m permanent plots located within a 40 m x 2 m area. The number of fronds &gt; 1 m tall are counted for each individual and used as an estimate of its size. The kelp disturbance experiment was initiated in 2008 at five reef sites along the mainland coast of the Santa Barbara Channel and included an annual kelp removal treatment designed to simulate increases in the frequency and severity of winter wave disturbance and a continual kelp removal treatment that allowed the effects of giant kelp on the community to be evaluated.
DOI: 10.6084/m9.figshare.22782572
title: Kilifi County post-training course surveys Migori County post-training course surveys

description: Post-training surveys were administered to 158 obstetric staff (nurses, midwives, doctors) working in Migori and Kilifi county hospitals following a comprehensive training course on postpartum hemorrhage (PPH) management and how to use the Ellavi intrauterine balloon tamponade. The training course included a lecture, videos, Ellavi UBT insertion mentor and mentee checklists, pre- and post-test questionnaires, team practice simulations (case scenarios), and job aid posters. We used this training package to implement a training-of-trainers session for 8 national level MOH staff in Nairobi (January, 2021); the 8 national trainer-of-trainers (TOT) then educated 173 providers within the two target counties in March (Migori County) and June (Kilifi County) of 2021 to also become TOTs. Of the 173 trained, 158 completed the survey. <br> The post-training survey was administered at the end of each training session to evaluate appropriateness, acceptability and feasibility of using the Ellavi UBT among obstetric health care workers by surveying comprehension of the usage steps, accuracy of use, perceptions and attitudes towards the device, usability and user confidence, facilitators of use, barriers to use, use-patterns, and insights into training effectiveness.
DOI: 10.6084/m9.figshare.22782572.v1
title: Kilifi County post-training course surveys Migori County post-training course surveys

description: Post-training surveys were administered to 158 obstetric staff (nurses, midwives, doctors) working in Migori and Kilifi county hospitals following a comprehensive training course on postpartum hemorrhage (PPH) management and how to use the Ellavi intrauterine balloon tamponade. The training course included a lecture, videos, Ellavi UBT insertion mentor and mentee checklists, pre- and post-test questionnaires, team practice simulations (case scenarios), and job aid posters. We used this training package to implement a training-of-trainers session for 8 national level MOH staff in Nairobi (January, 2021); the 8 national trainer-of-trainers (TOT) then educated 173 providers within the two target counties in March (Migori County) and June (Kilifi County) of 2021 to also become TOTs. Of the 173 trained, 158 completed the survey. <br> The post-training survey was administered at the end of each training session to evaluate appropriateness, acceptability and feasibility of using the Ellavi UBT among obstetric health care workers by surveying comprehension of the usage steps, accuracy of use, perceptions and attitudes towards the device, usability and user confidence, facilitators of use, barriers to use, use-patterns, and insights into training effectiveness.
DOI: 10.6073/pasta/02f4e99ca9d972cb4b0db05da9354716
title: SBC LTER: Reef: Long-term experiment: Kelp removal: Fish abundance

description: These data describe the abundance and size of reef-associated fish within permanent plots of a long-term experiment designed to examine trajectories of change in the structure and productivity of kelp forest communities in response to changes in the frequency and severity of disturbance to giant kelp. The number, size and species identity of reef fish are recorded within a 2 m wide swath centered along a 40 m long transect extending up to 2 m off the bottom. Fish size is measured as total length estimated to the nearest cm. The kelp disturbance experiment was initiated in 2008 at five reef sites along the mainland coast of the Santa Barbara Channel and included an annual kelp removal treatment designed to simulate increases in the frequency and severity of winter wave disturbance and a continual kelp removal treatment that allowed the effects of giant kelp on the community to be evaluated.
DOI: 10.17909/gg3s-cc68
title: Procyon A Archival Data

description: Archival data used during the development of the SED of Procyon A.
DOI: 10.6073/pasta/325f70421c3f27666a7631ffb5cbcf89
title: SBC LTER: Reef: Long-term experiment: Kelp removal: Invertebrate and algal density

description: These data describe the abundance of common reef associated species of macro invertebrates and macroalgae within permanent plots of a long-term experiment designed to examine trajectories of change in the structure and productivity of kelp forest communities in response to changes in the frequency and severity of disturbance to giant kelp. The number of individuals of approximately 50 taxa were recorded by divers along 40 m transects within each plot. Small species of macroalgae and macinvertebrates were counted within six permanent 1 m2 quadrats positioned uniformly along the 40 m transect, while larger species were counted within four contiguous 20 m2 sub-sections of each 40 m x 2 m transect. Also included at the quadrat scale are estimates of an average size-related measurement of each species, which was developed specifically for each species for the purpose of estimating its biomass. The kelp disturbance experiment was initiated in 2008 at five reef sites along the mainland coast of the Santa Barbara Channel and included an annual kelp removal treatment designed to simulate increases in the frequency and severity of winter wave disturbance and a continual kelp removal treatment that allowed the effects of giant kelp on the community to be evaluated.
DOI: 10.6073/pasta/4e679e3aa64d3649a91aefebeeb8fd24
title: SBC LTER: Reef: Long-term experiment: Kelp removal: Cover of bottom substrate and sand depth

description: These data describe the percent cover of eight bottom substrate types within permanent plots of a long-term experiment designed to examine trajectories of change in the structure and productivity of kelp forest communities in response to changes in the frequency and severity of disturbance to giant kelp. The type of bottom substrate is recorded at 80 uniformly spaced points along permanent 40m x 2m transects. Percent cover of each substrate type on transect is estimated as the proportion of the 80 points contacted by the substrate type x 100. In cases where the substrate type is sand the depth of the sand is measured. The kelp disturbance experiment was initiated in 2008 at five reef sites along the mainland coast of the Santa Barbara Channel and included an annual kelp removal treatment designed to simulate increases in the frequency and severity of winter wave disturbance and a continual kelp removal treatment that allowed the effects of giant kelp on the community to be evaluated. The two tables in this data package include: 1) The percent cover of eight bottom substrate types; and 2) the sand depth of each sampling point (sand depth = 0 if substrate type is not sand)
DOI: 10.5281/zenodo.6794106
title: Antagonism of CGRP Receptor: Central and Peripheral Mechanisms and Mediators in an Animal Model of Chronic Migraine

description: This dataset includes the findings obtained in the study aimed at investigating in more depth the interplay between the neuropeptide CGRP and the inflammatory mediators within the mechanisms of neuronal sensitization in an animal model of chronic migraine, using olcegepant as a pharmacological probe. Male Sprague-Dawley rats were exposed to nitroglycerin (NTG, 10 mg/kg, i.p.) or NTG vehicle and treated with the CGRP receptor antagonist olcegepant (1 or 2 mg/kg, i.p.) or vehicle (1 ml/kg, i.p.) 1h before the orofacial formalin test. Additionally, sets of rats received NTG (5 mg/kg, i.p.) or vehicle (equivalent volume) co-administered with olcegepant (2 mg/kg i.p.) or its vehicle every other day over a 9-day period. Twenty-four hours after the last injection of NTG (or vehicle), a first set of rats underwent the orofacial formalin test. In a second set, we evaluated the gene expression of CGRP and gene and protein expression of pro-inflammatory cytokines in specific areas involved in migraine pain. We also assessed the CGRP and cytokine levels in serum. The in vivo and ex vivo assessments were: 1) Pain-related behavior in the orofacial formalin test: the face rubbing was measured counting the seconds the animal spent grooming the injected area (upper lip, lateral to the nose) with the ipsilateral forepaw or hindpaw 0–6 min (Phase I) or 12–45 min (Phase II) after formalin injection (50 µl, s.c.). The observation time was divided into 15 blocks of 3 min each. 2) mRNA expression levels: CGRP, tumor necrosis factor-alpha (TNF-alpha), interleukin-1beta (IL-1beta), transient receptor potential ankyrin 1 (TRPA1) in cervical spinal cord (CSC), medulla-pons and trigeminal ganglia (TGs). mRNA levels were measured by rt-PCR. The same RNA was used for miRNAs (Mir-34a-5p, Mir-382-5p, Mir-155-5p) extraction in the same areas. All samples were assayed in triplicate and gene expression levels were calculated according to 2−∆∆Ct = 2− (∆Ct gene − ∆Ct housekeeping gene) formula by using Ct (cycle threshold) values. 3) Pro-inflammatory cytokines in medulla-pons, CSC and TGs were evaluated using ELISA procedure. CGRP, TNF-alpha and IL-1beta serum levels were measured using commercial ELISA kits. Results in brief Olcegepant attenuated nitroglycerin-induced trigeminal hyperalgesia in the second phase of the orofacial formalin test. Interestingly, it also reduced gene expression and protein levels of CGRP, pro-inflammatory cytokines, inflammatory-associated miRNAs (miR-155-5p, miR-382-5p and miR-34a-5p) and TRPA1 channels in medulla-pons area, cervical spinal cord and trigeminal ganglia. Similarly, olcegepant reduced the NTG-induced increase of CGRP and inflammatory.
description: Funding: Biomiga
DOI: 10.5281/zenodo.6794105
title: Antagonism of CGRP Receptor: Central and Peripheral Mechanisms and Mediators in an Animal Model of Chronic Migraine

description: This dataset includes the findings obtained in the study aimed at investigating in more depth the interplay between the neuropeptide CGRP and the inflammatory mediators within the mechanisms of neuronal sensitization in an animal model of chronic migraine, using olcegepant as a pharmacological probe. Male Sprague-Dawley rats were exposed to nitroglycerin (NTG, 10 mg/kg, i.p.) or NTG vehicle and treated with the CGRP receptor antagonist olcegepant (1 or 2 mg/kg, i.p.) or vehicle (1 ml/kg, i.p.) 1h before the orofacial formalin test. Additionally, sets of rats received NTG (5 mg/kg, i.p.) or vehicle (equivalent volume) co-administered with olcegepant (2 mg/kg i.p.) or its vehicle every other day over a 9-day period. Twenty-four hours after the last injection of NTG (or vehicle), a first set of rats underwent the orofacial formalin test. In a second set, we evaluated the gene expression of CGRP and gene and protein expression of pro-inflammatory cytokines in specific areas involved in migraine pain. We also assessed the CGRP and cytokine levels in serum. The in vivo and ex vivo assessments were: 1) Pain-related behavior in the orofacial formalin test: the face rubbing was measured counting the seconds the animal spent grooming the injected area (upper lip, lateral to the nose) with the ipsilateral forepaw or hindpaw 0–6 min (Phase I) or 12–45 min (Phase II) after formalin injection (50 µl, s.c.). The observation time was divided into 15 blocks of 3 min each. 2) mRNA expression levels: CGRP, tumor necrosis factor-alpha (TNF-alpha), interleukin-1beta (IL-1beta), transient receptor potential ankyrin 1 (TRPA1) in cervical spinal cord (CSC), medulla-pons and trigeminal ganglia (TGs). mRNA levels were measured by rt-PCR. The same RNA was used for miRNAs (Mir-34a-5p, Mir-382-5p, Mir-155-5p) extraction in the same areas. All samples were assayed in triplicate and gene expression levels were calculated according to 2−∆∆Ct = 2− (∆Ct gene − ∆Ct housekeeping gene) formula by using Ct (cycle threshold) values. 3) Pro-inflammatory cytokines in medulla-pons, CSC and TGs were evaluated using ELISA procedure. CGRP, TNF-alpha and IL-1beta serum levels were measured using commercial ELISA kits. Results in brief Olcegepant attenuated nitroglycerin-induced trigeminal hyperalgesia in the second phase of the orofacial formalin test. Interestingly, it also reduced gene expression and protein levels of CGRP, pro-inflammatory cytokines, inflammatory-associated miRNAs (miR-155-5p, miR-382-5p and miR-34a-5p) and TRPA1 channels in medulla-pons area, cervical spinal cord and trigeminal ganglia. Similarly, olcegepant reduced the NTG-induced increase of CGRP and inflammatory.
description: Funding: Biomiga
DOI: 10.6084/m9.figshare.22215322
title: Raw_Consolidated_ECA_Complete_2022,csv

description: Data on air quality and meteorological variables provided by the SDA measurements of the Fontibón and Móvil Fontibón air quality stations placed in the same Fontibón County of Bogotá, Colombia
DOI: 10.6084/m9.figshare.22215322.v5
title: Raw_Consolidated_ECA_Complete_2022,csv

description: Data on air quality and meteorological variables provided by the SDA measurements of the Fontibón and Móvil Fontibón air quality stations placed in the same Fontibón County of Bogotá, Colombia
DOI: 10.6084/m9.figshare.22215169
title: Raw_Consolidated_Manual_PM10.csv

description: PM10 air quality data was collected directly in Fontibon County for 27 days using a Tisch ® TE-6070V Hi Vol equipment.
DOI: 10.6084/m9.figshare.22215169.v4
title: Raw_Consolidated_Manual_PM10.csv

description: PM10 air quality data was collected directly in Fontibon County for 27 days using a Tisch ® TE-6070V Hi Vol equipment.