cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/wpacards-m79227
title: WPA household census for 11421 CALIFORNIA, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/wcpziz
title: cases_by_report.tab
DOI: 10.25549/wpacards-m79228
title: WPA household census for 11427 CALIFORNIA, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79229
title: WPA household census for 3321 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/rxaokp
title: high_reported_cases_plot.png
DOI: 10.25549/wpacards-m79230
title: WPA household census for 3317 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79231
title: WPA household census for 3311 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/g8nc4j
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79232
title: WPA household census for 3311 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/rju4lv
title: latest_date.rds
DOI: 10.25549/wpacards-m79233
title: WPA household census for 3311 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79234
title: WPA household census for 3309 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/ep2n9z
title: reported_cases.tab
DOI: 10.25549/wpacards-m79235
title: WPA household census for 3307 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/mvmehe
title: summary_data.tab
DOI: 10.25549/wpacards-m79236
title: WPA household census for 3307 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/59krna
title: summary_table.tab
DOI: 10.25549/wpacards-m79237
title: WPA household census for 3305 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/okaoak
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79238
title: WPA household census for 3303 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79239
title: WPA household census for 11430 LONG BEACH B, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/wslniq
title: growth_rate.tab
DOI: 10.25549/wpacards-m79240
title: WPA household census for 11420 LONG BEACH B, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/saa8lq
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79241
title: WPA household census for 11416 LONG BEACH B, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79242
title: WPA household census for 3318 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/4y8eeg
title: latest_date.rds
DOI: 10.25549/wpacards-m79243
title: WPA household census for 3506 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79244
title: WPA household census for 3510 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/sri5uq
title: reported_cases.tab
DOI: 10.25549/wpacards-m79245
title: WPA household census for 3516 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/bkdxum
title: summary_data.tab
DOI: 10.25549/wpacards-m79246
title: WPA household census for 3520 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/mxvqwh
title: summary_table.tab
DOI: 10.25549/wpacards-m79247
title: WPA household census for 3526 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79248
title: WPA household census for 3530 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/pkxk2h
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79249
title: WPA household census for 3536 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79250
title: WPA household census for 3540 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79251
title: WPA household census for 3544 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/cjoywy
title: growth_rate.tab
DOI: 10.25549/wpacards-m79252
title: WPA household census for 3550 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/rw53qa
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79253
title: WPA household census for 11451 COPELAND, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79254
title: WPA household census for 11455 COPELAND, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/jvwbre
title: latest_date.rds
DOI: 10.25549/wpacards-m79255
title: WPA household census for 11459 COPELAND, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/6jt0ql
title: reported_cases.tab
DOI: 10.25549/wpacards-m79256
title: WPA household census for 11461 COPELAND, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79257
title: WPA household census for 11463 COPELAND, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/wbwd1w
title: summary_data.tab
DOI: 10.7910/dvn/ttlqrn/zjmjzj
title: summary_table.tab
DOI: 10.25549/wpacards-m79258
title: WPA household census for 11469 COPELAND, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79259
title: WPA household census for 11479 COPELAND, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79260
title: WPA household census for 3363 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/ivwnio
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79261
title: WPA household census for 3355 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79262
title: WPA household census for 3353 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79263
title: WPA household census for 3351 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/wg8hf7
title: growth_rate.tab
DOI: 10.25549/wpacards-m79264
title: WPA household census for 3353 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/bn84yp
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79265
title: WPA household census for 3353 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79266
title: WPA household census for 3353 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/pworee
title: latest_date.rds
DOI: 10.25549/wpacards-m79267
title: WPA household census for 3345 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/oeguxk
title: reported_cases.tab
DOI: 10.25549/wpacards-m79268
title: WPA household census for 3339 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/jxfrnp
title: summary_data.tab
DOI: 10.25549/wpacards-m79269
title: WPA household census for 3327 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/iulzsr
title: summary_table.tab
DOI: 10.1285/i9788883051753
title: La comunicazione: media, processi produttivi e narrazioni. Atti del Workshop 2020

description: Il volume, composto da 10 saggi che costituiscono solo una parte dei contributi discussi nel Workshop "La comunicazione: media, processi produttivi e narrazioni" del Dottorato in Human and Social Sciences dell'Università del Salento (Lecce, 15-16 ottobre 2020), attesta la vivacità delle riflessioni sul tema presenti nelle discipline storiche, geografiche, giuridiche, sociologiche, pedagogiche e psicologiche e tramite l'open access consente di rendere disponibili tali prodotti della ricerca alla comunità globale, scientifica e non, per divulgare le prospettive di sviluppo delle proposte di cui il Dottorato si è fatto incubatore.
DOI: 10.25549/wpacards-m79270
title: WPA household census for 3323 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79271
title: WPA household census for 3323 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/uhvy1d
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79272
title: WPA household census for 3323 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/aovzzd
title: high_infections_plot.png
DOI: 10.25549/wpacards-m79273
title: WPA household census for 3323 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79274
title: WPA household census for 3323 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79275
title: WPA household census for 3321 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/y9zfrr
title: high_reported_cases_plot.png
DOI: 10.7910/dvn/ttlqrn/ogqqqb
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79276
title: WPA household census for 3319 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79277
title: WPA household census for 3315 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/n4yyp5
title: latest_date.rds
DOI: 10.25549/wpacards-m79300
title: WPA household census for 3600 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79301
title: WPA household census for 3606 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79302
title: WPA household census for 3616 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/ralrv9
title: reported_cases.tab
DOI: 10.25549/wpacards-m79303
title: WPA household census for 3622 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/puqr58
title: summary_data.tab
DOI: 10.25549/wpacards-m79304
title: WPA household census for 3630 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79305
title: WPA household census for 3640 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/5zp3rw
title: summary_table.tab
DOI: 10.25549/wpacards-m79306
title: WPA household census for 3652 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/4exdjp
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79307
title: WPA household census for 3656 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/6ctjzd
title: growth_rate.tab
DOI: 10.25549/wpacards-m79308
title: WPA household census for 3662 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79309
title: WPA household census for 3673 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/xrvgio
title: high_reported_cases_plot.png
DOI: 10.25549/wpacards-m79310
title: WPA household census for 3667 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/ilmnww
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79311
title: WPA household census for 3657 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79312
title: WPA household census for 3651 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/jwwnka
title: latest_date.rds
DOI: 10.25549/wpacards-m79313
title: WPA household census for 3643 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/u75gf6
title: reported_cases.tab
DOI: 10.25549/wpacards-m79314
title: WPA household census for 3637 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79315
title: WPA household census for 3633 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79316
title: WPA household census for 3627 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/o3x1qv
title: summary_data.tab
DOI: 10.25549/wpacards-m79317
title: WPA household census for 3623 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/ry89lm
title: summary_table.tab
DOI: 10.25549/wpacards-m79318
title: WPA household census for 3617 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79319
title: WPA household census for 3613 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/0h9del
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79320
title: WPA household census for 3607 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79321
title: WPA household census for 3603 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/dxnyiu
title: high_infections_plot.png
DOI: 10.25549/wpacards-m79322
title: WPA household census for 11438 BIRCH ST, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/cqo2lg
title: high_reported_cases_plot.png
DOI: 10.25549/wpacards-m79323
title: WPA household census for 11434 BIRCH ST, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79324
title: WPA household census for 11434 BIRCH ST, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/iyb5gp
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79325
title: WPA household census for 11430 BIRCH ST, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/3tedzr
title: latest_date.rds
DOI: 10.25549/wpacards-m79326
title: WPA household census for 11430 BIRCH ST, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/dtxz8j
title: reported_cases.tab
DOI: 10.25549/wpacards-m79327
title: WPA household census for 3716 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/9rzplm
title: summary_data.tab
DOI: 10.25549/wpacards-m79328
title: WPA household census for 3716 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79329
title: WPA household census for 3726 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79330
title: WPA household census for 3732 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/yoebcw
title: summary_table.tab
DOI: 10.25549/wpacards-m79331
title: WPA household census for 3744 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/h07tu1
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79332
title: WPA household census for 3750 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79333
title: WPA household census for 3723 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/0jbcaw
title: growth_rate.tab
DOI: 10.25549/wpacards-m79334
title: WPA household census for 3721 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/mhtcnf
title: high_reported_cases_plot.png
DOI: 10.25549/wpacards-m79335
title: WPA household census for 3717 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79336
title: WPA household census for 3713 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/meaupp
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79337
title: WPA household census for 3707 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79338
title: WPA household census for 3703 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/ztmisb
title: latest_date.rds
DOI: 10.25549/wpacards-m79339
title: WPA household census for 3697 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/juwnre
title: reported_cases.tab
DOI: 10.1285/i9788883051753p1
title: Frontespizio e pagine iniziali
DOI: 10.25549/wpacards-m79340
title: WPA household census for 3687 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/r5yj4x
title: summary_data.tab
DOI: 10.25549/wpacards-m79341
title: WPA household census for 3681 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79342
title: WPA household census for 11438 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/yrajva
title: summary_table.tab
DOI: 10.25549/wpacards-m79395
title: WPA household census for 3706 LUGO AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79396
title: WPA household census for 3730 LUGO AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/a0rg4u
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79397
title: WPA household census for 3736 LUGO AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/xbjsjk
title: high_infections_plot.png
DOI: 10.25549/wpacards-m79398
title: WPA household census for 11503 BULLIS RD, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79399
title: WPA household census for 3737 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/yjq56d
title: high_reported_cases_plot.png
DOI: 10.25549/wpacards-m79400
title: WPA household census for 3713 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/xbcm9k
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79401
title: WPA household census for 3707 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79402
title: WPA household census for 3701 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79403
title: WPA household census for 3685 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/skutam
title: latest_date.rds
DOI: 10.25549/wpacards-m79404
title: WPA household census for 3681 FERNWOOD AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/ctacfj
title: reported_cases.tab
DOI: 10.25549/wpacards-m79405
title: WPA household census for 3891 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79406
title: WPA household census for 3883 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/tr9vdd
title: summary_data.tab
DOI: 10.25549/wpacards-m79407
title: WPA household census for 3877 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79408
title: WPA household census for 3867 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/itg3va
title: summary_table.tab
DOI: 10.1285/i9788883051753p3
title: Indice
DOI: 10.25549/wpacards-m79409
title: WPA household census for 3937 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/1sngdn
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79410
title: WPA household census for 4010 PLATT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79411
title: WPA household census for 4013 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/edffqh
title: growth_rate.tab
DOI: 10.25549/wpacards-m79412
title: WPA household census for 4007 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/qehffk
title: high_reported_cases_plot.png
DOI: 10.25549/wpacards-m79413
title: WPA household census for 3844 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79414
title: WPA household census for 3847 LUGO AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/gq5ybd
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79415
title: WPA household census for 3831 LUGO AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79416
title: WPA household census for 3819 LUGO AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/v8fu4f
title: latest_date.rds
DOI: 10.25549/wpacards-m79417
title: WPA household census for 3813 LUGO AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79418
title: WPA household census for 11470 BULLIS RD, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/dcqqex
title: reported_cases.tab
DOI: 10.25549/wpacards-m79419
title: WPA household census for 11462 BULLIS RD, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/e9conp
title: summary_data.tab
DOI: 10.25549/wpacards-m79420
title: WPA household census for 3866 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.25549/wpacards-m79421
title: WPA household census for 3870 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/flz08u
title: summary_table.tab
DOI: 10.25549/wpacards-m79422
title: WPA household census for 3890 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.5281/zenodo.5994318
title: Signature of long-lived memory CD8+ T cells in acute SARS-CoV-2 infection

description: The datasets uploaded in this Zenodo entry were generated in the single cell RNA sequencing part of the project. For the scRNAseq analysis, cells from ten patients and the same time point were pooled together, generating four individual sample sets in total: (1) patients CoV2_T001- CoV2_T010, acute; (2) patients CoV2_T001- CoV2_T010, six months post-infection; (3) patients CoV2_T011- CoV2_T020, acute; (4) patients CoV2_T011- CoV2_T011-20, six months post-infection. We additionally generated two more sample sets: using 5000 unsorted PBMCs from each patient’s sample: (5) patients CoV2_T001- CoV2_T010, six months post-infection unsorted; (6) patients CoV2_T011- CoV2_T020, six months post-infection unsorted. The cells in these two sample sets were hashed. Finally, using PBMCs from four healthy donors, we generated sample set (7) by sorting and pooling 2000 CD8+ T cells from each healthy donor sample. We are here providing the pre-processed sets for each sample set (1-7), i.e. :<br> - "filtered feature bc matrix" files, as output from the ‘cellranger multi’ pipeline (Cell Ranger version 5.0.0), containing cell-RNA count matrices and cell-ADT matrices. ADTs comprise counts for TotalSeq antibodies and dCODE Dextramers.<br> - "filtered_contig_annotations.csv" files, as output from the ‘cellranger multi’ pipeline (Cell Ranger version 5.0.0), containing High-level annotations of each high-confidence, cellular contig for TCR clonal analysis. This file is not present for sets 5 and 6, because we did not perform TCR profiling for these samples.<br> - "clusters.tsv" files, as output from the souporcell SNP analysis (version 2). To cluster cells based on their patient specific genetic variants, we merged sample sets 1, 2 and 5 (comprising sorted cells from both time points of patients CoV2_T001- CoV2_T010 and unsorted cells of the same patients) and sets 3, 4 and 6 (comprising cells from both time points of patients CoV2_T011- CoV2_T020 and unsorted cells of the same patients). Then, we executed the souporcell pipeline with option <em>k=10 </em>(number of clusters to be determined) for each of the two merged sample sets. Together, these files allow to reproduce the analysis as reported in the paper. Additionally, we provide the Seurat Objects "Integrated.h5seurat" and "Integrated_NA_filtered.h5seurat" which can be used to skip the pre-processing steps of the data analysis. See the code provided on https://github.com/Moors-Code/SARS-CoV-2-Tcell-Boyman-collaboration for details.
DOI: 10.7910/dvn/ttlqrn/xakoth
title: cases_by_infection.tab
DOI: 10.25549/wpacards-m79423
title: WPA household census for 3890 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.5281/zenodo.5119632
title: Signature of long-lived memory CD8+ T cells in acute SARS-CoV-2 infection

description: The datasets uploaded in this Zenodo entry were generated in the single cell RNA sequencing part of the project. For the scRNAseq analysis, cells from ten patients and the same time point were pooled together, generating four individual sample sets in total: (1) patients CoV2_T001- CoV2_T010, acute; (2) patients CoV2_T001- CoV2_T010, six months post-infection; (3) patients CoV2_T011- CoV2_T020, acute; (4) patients CoV2_T011- CoV2_T011-20, six months post-infection. We additionally generated two more sample sets: using 5000 unsorted PBMCs from each patient’s sample: (5) patients CoV2_T001- CoV2_T010, six months post-infection unsorted; (6) patients CoV2_T011- CoV2_T020, six months post-infection unsorted. The cells in these two sample sets were hashed. Finally, using PBMCs from four healthy donors, we generated sample set (7) by sorting and pooling 2000 CD8+ T cells from each healthy donor sample. We are here providing the pre-processed sets for each sample set (1-7), i.e. :<br> - "filtered feature bc matrix" files, as output from the ‘cellranger multi’ pipeline (Cell Ranger version 5.0.0), containing cell-RNA count matrices and cell-ADT matrices. ADTs comprise counts for TotalSeq antibodies and dCODE Dextramers.<br> - "filtered_contig_annotations.csv" files, as output from the ‘cellranger multi’ pipeline (Cell Ranger version 5.0.0), containing High-level annotations of each high-confidence, cellular contig for TCR clonal analysis. This file is not present for sets 5 and 6, because we did not perform TCR profiling for these samples.<br> - "clusters.tsv" files, as output from the souporcell SNP analysis (version 2). To cluster cells based on their patient specific genetic variants, we merged sample sets 1, 2 and 5 (comprising sorted cells from both time points of patients CoV2_T001- CoV2_T010 and unsorted cells of the same patients) and sets 3, 4 and 6 (comprising cells from both time points of patients CoV2_T011- CoV2_T020 and unsorted cells of the same patients). Then, we executed the souporcell pipeline with option <em>k=10 </em>(number of clusters to be determined) for each of the two merged sample sets. Together, these files allow to reproduce the analysis as reported in the paper. Additionally, we provide the Seurat Objects "Integrated.h5seurat" and "Integrated_NA_filtered.h5seurat" which can be used to skip the pre-processing steps of the data analysis. See the code provided on https://github.com/Moors-Code/SARS-CoV-2-Tcell-Boyman-collaboration for details.
DOI: 10.25549/wpacards-m79424
title: WPA household census for 3900 WALNUT AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/8ior3l
title: high_infections_plot.png
DOI: 10.1285/i9788883051753p4
title: Presentazione
DOI: 10.25549/wpacards-m79425
title: WPA household census for 3907 LUGO AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/f25jyl
title: high_reported_cases_plot.png
DOI: 10.25549/wpacards-m79426
title: WPA household census for 3901 LUGO AVE, Lynwood, Los Angeles County
DOI: 10.7910/dvn/ttlqrn/ckqi4u
title: high_rt_plot.png
DOI: 10.25549/wpacards-m79427
title: WPA household census for 3895 LUGO AVE, Lynwood, Los Angeles County