cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25721/dpjk-4879
title: "L'autre jour je m'en allais de Paris à Carpente", chanson à ritournelle
DOI: 10.6084/m9.figshare.16989739
title: Trees

description: The dataset contains phylogenetic trees. For Methods refer to the corresponding section of the original publication.
DOI: 10.6084/m9.figshare.16989739.v1
title: Trees

description: The dataset contains phylogenetic trees. For Methods refer to the corresponding section of the original publication.
DOI: 10.25721/b83z-ty43
title: "L'autre jour je m'en allais de Paris à Carpente", chanson à ritournelle
DOI: 10.25721/7mpp-pw58
title: Comptine
DOI: 10.25721/hkj7-nv24
title: Comptine
DOI: 10.17034/1a714f3d-cc11-4ba9-bcf8-cc31a182ac29
title: Studies of antiviral photocatalytic activity

description: Brief report on EPSRC funded research on antiviral photocatalytic activity of films
DOI: 10.34840/c970-9p38
title: Serum inflammatory cytokines as disease biomarkers in the DE50-MD dog model of Duchenne muscular dystrophy 
title: Underlying and Extended data

description: Underlying and Extended data
DOI: 10.6084/m9.figshare.17012657
title: Supplementary Material for: Does Whole-Body Vibration Training Have a Concurrent Effect on Bone and Muscle Health? A Systematic Review and Meta-Analysis

description: <b><i>Background:</i></b> Aging results in musculoskeletal disorders, which are a leading cause of disability worldwide. While conventional nonpharmacological treatments have included interventions such as resistance exercise, there are subgroups of people who may be at risk of exercise-related injuries, for example, falls. Whole-body vibration (WBV) is an intervention that helps improve musculoskeletal function and is viable for those with limited mobility. <b><i>Objectives:</i></b> Whether WBV has a dual effect on bone and muscle conditions remains unknown. We aim to assess the evidence of the effects of WBV on bone and muscle parameters concurrently in older people. <b><i>Methods:</i></b> Under Preferred Reporting Items for Systematic Review and Meta-Analysis guidelines, a systematic literature search was performed in MEDLINE, EMBASE, EMCARE, and the Cochrane Central Registry of Controlled Trials. The main outcomes were changes in bone and muscle parameters. <b><i>Results:</i></b> Our meta-analysis showed that WBV does not have significant synergistic effects on measured bone (bone mineral density [BMD] in the hip and lumbar spine) and muscle (lean muscle mass and sit-to-stand time) outcomes, compared to controls (i.e., no WBV included). <b><i>Conclusion:</i></b> While there were no significant results, the included studies are limited by small sample size and variable intervention protocols and follow-up periods. Further trials should endeavor to measure both bone and muscle outcomes concurrently with a longer follow-up time. Osteoporosis status in participants must also be considered as it is not yet possible to exclude that WBV may have a significant effect on BMD in people with known osteoporosis. WBV does not appear to simultaneously influence bone and muscle health in older people, and future research is required to establish a regimen that may lead to measurable clinical efficacy.
DOI: 10.5281/zenodo.5701600
title: Wikidata Dump sdffsddf

description: RDF dump of wikidata produced with wdumps. sdff<br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.5281/zenodo.5701599
title: Wikidata Dump sdffsddf

description: RDF dump of wikidata produced with wdumps. sdff<br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.6084/m9.figshare.17012675
title: Supplementary Material for: Profiling and Bioinformatics Analysis Revealing Differential Circular RNA Expression about Storage Lesion Regulatory in Stored Red Blood Cells

description: <b><i>Introduction:</i></b> Circular RNA (circRNA) plays an important role in regulating metabolism of red blood cells (RBCs) and their storage lesions, but the study of how circRNA expression changes in stored RBCs has rarely been conducted. <b><i>Methods:</i></b> The expression change of circRNA was systemically evaluated via high-throughput sequencing on healthy RBCs on day 0, 20, and 40. And then we confirmed the reliability of the high-throughput sequencing analysis by RT-qPCR characterization on selected circRNAs. A higher parental gene enrichment was used to explore circRNA function in pathways. In addition, we deciphered a dysregulated circRNA-related ceRNAs network, and identified three circRNA-miRNA-mRNA regulatory axes related to storage lesion. <b><i>Results:</i></b> We identified 2,586 known and 6,216 putative novel circRNAs, more than 100 circRNAs expression levels were shifted, and the number of downregulated circRNAs was greater with longer storage time. Furthermore, a higher parental gene enrichment related to circRNA was found in pathways, including cAMP signaling pathway, ubiquitin-mediated proteolysis, apoptosis, adhesion, MAPK signaling pathway, cystine methionine metabolism, RNA degradation, RNA transport, TGF-β, and actin regulatory pathway. hsa_circ_0007127-miR-513a-5p-SMAD4, hsa_circ_0000033-miR-19a-3p-VAMP3, and hsa_circ_0005546-miR-4720-CCND3 regulatory axes related to storage lesion was found. <b><i>Conclusions:</i></b> Through investigation in circRNAs profile and circRNA-miRNA-mRNA interactions, this study provides insights on stored RBC circRNA expression changes, which closely relate to the storage lesion of RBCs and their physiological functions.
DOI: 10.6084/m9.figshare.14766102.v22
title: antspyt1w helper data

description: downloadable cloud data for testing and processing
DOI: 10.5281/zenodo.5359158
title: Correlated-k table for H2O+N2 atmospheres

description: Correlated-k table for H<sub>2</sub>O+N<sub>2</sub> atmospheres. According to the MT_CKD formalism, the water vapor absorption lines are truncated at 25cm<sup>-1</sup> and the plinth is removed. Absorption lines take into account all mutual interactions between water and nitrogen, including foreign broadening. We used water lines from the HITRAN database. Temperature grid (Kelvin): [50, 110, 170, 230, 290, 350, 410, 470, 530, 590, 650, 710, 5000] Pressure grid (Pascal): [10<sup>-1</sup>, 1, 10, 10<sup>2</sup>, 10<sup>3</sup>, 10<sup>4</sup>, 10<sup>5</sup>, 10<sup>6</sup>, 10<sup>7</sup>] Water mass mixing ratio grid: [10<sup>-6</sup>, 10<sup>-5</sup>, 10<sup>-4</sup>, 10<sup>-3</sup>, 10<sup>-2</sup>, 10<sup>-1</sup>, 1] Spectral range (cm<sup>-1</sup>): [0.1, 30000] Spectral resolution R=300
DOI: 10.5281/zenodo.5359157
title: Correlated-k table for H2O+N2 atmospheres

description: Correlated-k table for H<sub>2</sub>O+N<sub>2</sub> atmospheres. According to the MT_CKD formalism, the water vapor absorption lines are truncated at 25cm<sup>-1</sup> and the plinth is removed. Absorption lines take into account all mutual interactions between water and nitrogen, including foreign broadening. We used water lines from the HITRAN database. Temperature grid (Kelvin): [50, 110, 170, 230, 290, 350, 410, 470, 530, 590, 650, 710, 5000] Pressure grid (Pascal): [10<sup>-1</sup>, 1, 10, 10<sup>2</sup>, 10<sup>3</sup>, 10<sup>4</sup>, 10<sup>5</sup>, 10<sup>6</sup>, 10<sup>7</sup>] Water mass mixing ratio grid: [10<sup>-6</sup>, 10<sup>-5</sup>, 10<sup>-4</sup>, 10<sup>-3</sup>, 10<sup>-2</sup>, 10<sup>-1</sup>, 1] Spectral range (cm<sup>-1</sup>): [0.1, 30000] Spectral resolution R=300
DOI: 10.6084/m9.figshare.17012756
title: Supplementary Material for: Secular Trends in the Incidence, Prevalence, and Medications for Epilepsy from 2007 to 2015 in Taiwan: A Nationwide Population-Based Study

description: <b><i>Background:</i></b> Patients with epilepsy have a higher mortality rate than the general population. Up-to-date estimates of epilepsy incidence, prevalence, and medication use are critical to assist policymaking. <b><i>Methods:</i></b> Using the National Taiwan Insurance Research Database, the standardized incidence and prevalence of epilepsy were estimated in each calendar year from 2007 to 2015. We used the incident cases of epilepsy to analyze the change in prescribing patterns from 2007 to 2015. Joinpoint regression was used to estimate secular trends. <b><i>Results:</i></b> From 2007 to 2015, the age- and sex-standardized incidence decreased from 0.72 (95% confidence interval [CI] 0.70–0.73) to 0.54 (95% CI 0.53–0.55) per 1,000 person-years, giving an annual percentage change (APC) of −2.73 (<i>p</i> &lt; 0.05). Among patients younger than 20 years, the incidence did not change significantly. The age- and sex-standardized prevalence decreased from 6.94 (95% CI 6.90–6.98) to 6.86 (95% CI, 6.82–6.89) per 1,000 people, giving an APC of −0.31 (<i>p</i> &lt; 0.05). However, the prevalence increased in the 35- to 49- and 50- to 64-year age-groups. The most common first-line anticonvulsant was phenytoin in 2007 and valproate in 2015. The use of levetiracetam, clobazam, and valproate increased during the study period, with APCs of 25.48% (95% CI 19.97–31.24), 6.41 (3.09–9.85), and 2.83 (1.51–4.16), respectively. The use of carbamazepine, phenytoin, and topiramate decreased; the APCs were −23.86% (95% CI −25.25 to −22.44), −6.61 (−8.40 to −4.79), and −4.29% (−7.87 to −0.57), respectively. <b><i>Conclusions:</i></b> The overall prevalence and incidence of epilepsy decreased slightly from 2007 to 2015. The prescribed first-line anticonvulsant also changed over time.
DOI: 10.25721/q4yr-7z41
title: Le juif errant
DOI: 10.25721/39e4-cs96
title: Adam et Eve
DOI: 10.5281/zenodo.5702583
title: Data presented in the paper "Impact of Giant Sea Salt Aerosol Particles on Precipitation in Marine Cumuli and Stratocumuli: Lagrangian Cloud Model Simulations"

description: View Readme.
DOI: 10.5281/zenodo.5702582
title: Data presented in the paper "Impact of Giant Sea Salt Aerosol Particles on Precipitation in Marine Cumuli and Stratocumuli: Lagrangian Cloud Model Simulations"

description: View Readme.
DOI: 10.6084/m9.figshare.12961823.v2
title: Figure 2. Thresholds of functional phototoxicity at 1300 nm and 1650 nm excitation in tumors in vivo.

description: Raw image data in ome.tiff format, supporting figure 2 of the manuscript Intravital Deep-Tumor Single-Beam 2-, 3- and 4-Photon Microscopy. Furthermore, the numerical data and analysis parameters supporting the plots in panel 2c and 2d are given in file Fig2c_2d_2020-7-9_PhototoxicityTimeLapses.opju. This file can be opened with OriginPro2020 or with the freely distributed Origin viewer (https://www.originlab.com/viewer/).
DOI: 10.6084/m9.figshare.12961829.v2
title: Figure 3. Tissue penetration and resolution of 2-, 3- and 4-photon microscopy in tumors in vivo.

description: Raw image data in ome.tiff format, supporting figure 3 of the manuscript Intravital Deep-Tumor Single-Beam 2-, 3- and 4-Photon Microscopy. Furthermore, the numerical data and analysis parameters supporting the plots in panels 3c, 3d, 3e and 3g are given in data files Fig3and4andS2_2020-1-4_SNR.opju, Fig3d_2019-04-7_DepthResolution.opju and Fig3e_4bd_S2c_AttenuationlengthAnalysis.opju. These files can be opened with OriginPro2020, or with the freely distributed Origin viewer (https://www.originlab.com/viewer/).
DOI: 10.6084/m9.figshare.12961952.v2
title: Supplementary Figure 1. Microscope setup and excitation parameters.

description: Raw image data in ome.tiff format, supporting supplementary figure 1 of the manuscript Intravital Deep-Tumor Single-Beam 2-, 3- and 4-Photon Microscopy. Furthermore, laser pulse length analysis files generated by the autocorrelator are included, and analysis report files generated by the point spread function analysis program (PSFj, Theer et al. Nature Methods 2014).
DOI: 10.6084/m9.figshare.12961955.v2
title: Supplementary Figure 2. THG and 3PE microscopy of the mouse neocortex, excited with OPA and OPO excitation, ex vivo.

description: Raw image data in ome.tiff format, supporting supplementary figure 2 of the manuscript Intravital Deep-Tumor Single-Beam 2-, 3- and 4-Photon Microscopy. Furthermore, the numerical data and analysis parameters supporting the plots in panels S2b and S2c are given in data files Fig3and4andS2_2020-1-4_SNR.opju and Fig3e_4bd_S2c_AttenuationlengthAnalysis.opju. These files can be opened with OriginPro2020, or with the freely distributed Origin viewer (https://www.originlab.com/viewer/).
DOI: 10.6084/m9.figshare.12961961.v2
title: Supplementary Table 1. Order of the excitation processes (n).

description: Raw image data, supporting supplementary table 1 of the manuscript Intravital Deep-Tumor Single-Beam 2-, 3- and 4-Photon Microscopy. Furthermore, the numerical data and analysis parameters supporting the table are given in data file TableS1_2019-03-12_EmissionVSpowerProteins.opju. This file can be opened with OriginPro2020, or with the freely distributed Origin viewer (https://www.originlab.com/viewer/).
DOI: 10.6084/m9.figshare.12961964
title: Supplementary Figure 6 data supporting manuscript Intravital Deep-Tumor Single-Beam 3-Photon, 4-Photon and Harmonic Microscopy.

description: Raw image data in ome.tiff format, supporting Supplementary Figure 6 of the manuscript Intravital Deep-Tumor Single-Beam 3-Photon, 4-Photon and Harmonic Microscopy.<br>Furthermore, numerical data and analysis parameters supporting the plots in panel 6b are given. The .opju analysis data file can be opened with OriginPro2020, or with the freely distributed Origin viewer (https://www.originlab.com/viewer/).
DOI: 10.6084/m9.figshare.12961964.v3
title: Supplementary Figure 6 data supporting manuscript Intravital Deep-Tumor Single-Beam 3-Photon, 4-Photon and Harmonic Microscopy.

description: Raw image data in ome.tiff format, supporting Supplementary Figure 6 of the manuscript Intravital Deep-Tumor Single-Beam 3-Photon, 4-Photon and Harmonic Microscopy.<br>Furthermore, numerical data and analysis parameters supporting the plots in panel 6b are given. The .opju analysis data file can be opened with OriginPro2020, or with the freely distributed Origin viewer (https://www.originlab.com/viewer/).
DOI: 10.6084/m9.figshare.12961964.v2
title: Supplementary Figure 5. Scanning-induced fluorophore bleaching and stasis of vascular perfusion.

description: Raw image data in ome.tiff format, supporting supplementary figure 5 of the manuscript Intravital Deep-Tumor Single-Beam 2-, 3- and 4-Photon Microscopy. Furthermore, the numerical data and analysis parameters supporting the plot in panel S5a are given in data file FigS5a_2019-11-8_BleachingAnalysis.opju. This file can be opened with OriginPro2020, or with the freely distributed Origin viewer (https://www.originlab.com/viewer/).
DOI: 10.5281/zenodo.5702621
title: SciExpeM - 10.5281/zenodo.5702621

description: A. Marchal, M. Cathonnet, P. Dagaut, M. Reuillon, M. Audinet, G. Belot, J.-F. Béziau. (n.d.). Proceedings of the Joint Meeting of the French and German Sections of the Combustion Institute, Mulhouse, 11–13.
DOI: 10.5281/zenodo.5702620
title: SciExpeM - 10.5281/zenodo.5702621

description: A. Marchal, M. Cathonnet, P. Dagaut, M. Reuillon, M. Audinet, G. Belot, J.-F. Béziau. (n.d.). Proceedings of the Joint Meeting of the French and German Sections of the Combustion Institute, Mulhouse, 11–13.
DOI: 10.5281/zenodo.5535973
title: Supporting data and code for: A high diversity of mechanisms endows ALS-inhibiting herbicide resistance in the invasive common ragweed (Ambrosia artemisiifolia L.)

description: Release to prime the zenodo repo
DOI: 10.5281/zenodo.5702629
title: SciExpeM - 10.5281/zenodo.5702629

description: A. Marchal, M. Cathonnet, P. Dagaut, M. Reuillon, M. Audinet, G. Belot, J.-F. Béziau. (n.d.). Proceedings of the Joint Meeting of the French and German Sections of the Combustion Institute, Mulhouse, 11–13.
DOI: 10.5281/zenodo.5702628
title: SciExpeM - 10.5281/zenodo.5702629

description: A. Marchal, M. Cathonnet, P. Dagaut, M. Reuillon, M. Audinet, G. Belot, J.-F. Béziau. (n.d.). Proceedings of the Joint Meeting of the French and German Sections of the Combustion Institute, Mulhouse, 11–13.
DOI: 10.5281/zenodo.5702617
title: Engineered nasal cartilage for the repair of osteoarthritic knee cartilage defects

description: Data underlying the figures in the publication “Engineered nasal cartilage for the repair of osteoarthritic knee cartilage defects”, published in <em>Sci. Transl. Med., <strong>2021</strong>, 13, eaaz4499.</em> https://www.science.org/doi/10.1126/scitranslmed.aaz4499 Table of contents: <strong>1. Data_file_S1</strong>: Experimental data for <em>Figures 2, 3, 6, Supplementary Figures S1-5 and Supplementary Tables 3-5</em>. <strong>2. Table S1</strong>: Differentially expressed genes between nasal and articular chondrocytes. Fold change data was calculated with a positive log2 fold change (FC) indicating higher expression in nasal relative to articular chondrocytes. An adjusted (adj) P value &lt; 0.05 was considered statistically significant. <strong>3. Table S2</strong>: Pathway enrichment among differentially expressed genes (DEGs) between nasal and articular chondrocytes. Pathway enrichment was performed using the PANTHER (version 14.1) overrepresentation test based on the DEGs between nasal and articular chondrocytes (table S1). An FDR &lt; 0.05 was considered statistically significant.
DOI: 10.5281/zenodo.5702616
title: Engineered nasal cartilage for the repair of osteoarthritic knee cartilage defects

description: Data underlying the figures in the publication “Engineered nasal cartilage for the repair of osteoarthritic knee cartilage defects”, published in <em>Sci. Transl. Med., <strong>2021</strong>, 13, eaaz4499.</em> https://www.science.org/doi/10.1126/scitranslmed.aaz4499 Table of contents: <strong>1. Data_file_S1</strong>: Experimental data for <em>Figures 2, 3, 6, Supplementary Figures S1-5 and Supplementary Tables 3-5</em>. <strong>2. Table S1</strong>: Differentially expressed genes between nasal and articular chondrocytes. Fold change data was calculated with a positive log2 fold change (FC) indicating higher expression in nasal relative to articular chondrocytes. An adjusted (adj) P value &lt; 0.05 was considered statistically significant. <strong>3. Table S2</strong>: Pathway enrichment among differentially expressed genes (DEGs) between nasal and articular chondrocytes. Pathway enrichment was performed using the PANTHER (version 14.1) overrepresentation test based on the DEGs between nasal and articular chondrocytes (table S1). An FDR &lt; 0.05 was considered statistically significant.
DOI: 10.5281/zenodo.5702648
title: SciExpeM - 10.5281/zenodo.5702648

description: A. Marchal, M. Cathonnet, P. Dagaut, M. Reuillon, M. Audinet, G. Belot, J.-F. Béziau. (n.d.). Proceedings of the Joint Meeting of the French and German Sections of the Combustion Institute, Mulhouse, 11–13.
DOI: 10.5281/zenodo.5702647
title: SciExpeM - 10.5281/zenodo.5702648

description: A. Marchal, M. Cathonnet, P. Dagaut, M. Reuillon, M. Audinet, G. Belot, J.-F. Béziau. (n.d.). Proceedings of the Joint Meeting of the French and German Sections of the Combustion Institute, Mulhouse, 11–13.
DOI: 10.5281/zenodo.5702659
title: SciExpeM - 10.5281/zenodo.5702659

description: A. Marchal, M. Cathonnet, P. Dagaut, M. Reuillon, M. Audinet, G. Belot, J.-F. Béziau. (n.d.). Proceedings of the Joint Meeting of the French and German Sections of the Combustion Institute, Mulhouse, 11–13.
DOI: 10.5281/zenodo.5702658
title: SciExpeM - 10.5281/zenodo.5702659

description: A. Marchal, M. Cathonnet, P. Dagaut, M. Reuillon, M. Audinet, G. Belot, J.-F. Béziau. (n.d.). Proceedings of the Joint Meeting of the French and German Sections of the Combustion Institute, Mulhouse, 11–13.
DOI: 10.6084/m9.figshare.13148117.v8
title: Rawdata Baseline/Replication - Impact of Usability Mechanisms

description: Rawdata and R code for usability mechanism - analysis of impact.<br>Baseline.xlsx: raw data of baseline experiment.Replication_1.xlsx: raw data of replication #1 of baseline experimentReplication_2.xlsx: raw data of replication #2 of baseline experiment<br>--subjectsBaseline.xlsx: demographic data for baseline experiment.subjectsReplication_1.xlsx: demographic data for replication #1 of baseline experiment.subjectsReplication_2.xlsx: demographic data for replication #2 of baseline experiment.<br><br>Analysis.R: file containing the R code to analyze experiments (Summary statistics).Meta-analysis.R: file containing the R code to analyze SE family of experiments.
DOI: 10.6084/m9.figshare.13148117.v9
title: Rawdata Baseline/Replication - Impact of Usability Mechanisms

description: Rawdata and R code for usability mechanism <br>Analysis of Impact-------------------------<br>Analysis.R: R code to analyze experiments (Summary statistics).<br>Meta-analysis.R: R code to analyze SE family of experiments.Baseline.xlsx: Raw data of baseline experiment.Replication_1.xlsx: Raw data of replication #1 of baseline experiment.Replication_2.xlsx: Raw data of replication #2 of baseline experiment.<br>Analysis of Moderators------------------------------Moderators.Rhtml: R code to analyze Moderators (gender, age and experiencia de compra). This code genera un html como resultado del análisis.SubjectsBaseline.xlsx: demographic data for baseline experiment.SubjectsReplication1.xlsx: demographic data for replication #1 of baseline experiment.SubjectsReplication2.xlsx: demographic data for replication #2 of baseline experiment.<br>Guidelines--------------GuidelineReplicationPack.pdf: Guideline for conducting replication (including experimental design, user tasks, metrics, questionaires, etc).<br>
DOI: 10.15129/a2c118f2-48a8-40d2-8896-89b9da71a4be
title: Data for: "Low-cost, High-speed Parallel FIR Filters for RFSoC Front-Ends Enabled by CλaSH"

description: This repository contains all of the source files for the parallel filter designs presented in the paper "Low-cost, High-speed Parallel FIR Filters for RFSoC Front-Ends Enabled by CλaSH". This dataset includes the nix environments, hardware descriptions, tests, result-generating scripts, and the raw results themselves. Here we employ Fast FIR Algorithm structures with Multiple Constant Multiplication subfilters (using Hcub) to explore low-cost, high-speed, parallel filter architectures in the context of RFSoC applications.