cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25810/3hvn-ef66.50
title: Danish Newspaper Coverage of Climate Change or Global Warming, 2004-2024 - November 2024

description: The Media and Climate Change Observatory Data monitors 126 sources (across newspapers, radio and TV) in 58 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.15468/dl.f3dm6g
title: Occurrence Download

description: A dataset containing 9484 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-115.30795 35.01855,-144.74118 31.51997,-164.00596 25.25311,-166.79123 17.36151,-167.02334 2.97095,-167.02334 -15.1333,-163.54175 -26.50648,-141.95591 -29.75596,-86.71473 -26.50648,-62.57573 -32.07702,-48.91084 -16.30306,-45.86411 -33.70176,-16.85088 -34.39808,3.85098 -25.92549,15.6299 -26.56565,17.34075 -38.83396,33.43425 -34.8106,34.19452 -25.9895,56.72666 -35.55861,79.93724 -35.0944,132.67755 -29.98254,159.76826 -28.90964,151.72153 -14.96194,173.70799 -14.43698,162.1027 -6.08117,142.60581 2.97095,124.03734 19.45047,110.10544 17.24851,90.61411 20.8431,75.81383 17.22507,63.45773 28.7347,43.62682 -5.57405,-11.51245 29.89523,-79.48851 31.44101,-91.93775 31.42487,-104.91167 31.77084,-115.30795 35.01855))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Oreochromis mossambicus (Peters, 1852)"
 ]
}

 The dataset includes 9484 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037907-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.8685
title: Data supporting NSPN publication "Characterising the latent structure and organisation of self-reported thoughts, feelings and behaviours in adolescents and young adults"

description: There are two data files supporting this publication. The first is the main file, which included all raw data used to create the bifactor structure reported in the paper. We have also included the saved factors scores as well as the latent profile subgroup classification. All variables used in the discriminant validity are included. Additionally there are sum scores relating to the individual measurements used in the factor analysis for both the entire cohort analysed in the main paper as well as 29 additional participants who were excluded due to missing data problems. The second data file contains both individuals included in NSPN as well as those who were considered “non-responders”. This includes basic demographic information which was used to compare responders with non-responders in the resulting paper.
DOI: 10.17863/cam.22990
title: Research data supporting: "Elucidation of the nature of the glass transition"

description: All presented data were generated based on trajectories of ab initio molecular dynamic (MD) simulations using VASP code. Twelve molecules were simulated within NPT ensemble. sorbitol.png contains schematic representation of sorbitol molecule with atom numbers used in data arrays indexing schemes. For each temperature (80, 40, 200, 260, 320 and 380 K) there are four files: T_POSCAR is VASP style POSCAR file, containing lattice vectors, atoms positions and velocities at the end of MD run. T_desc.npz is a python dictionary containing arrays of structural MD data that can be accessed wit appropriate keys: ‘doc’: O-C pair distance, ‘doh’: O-H pair distance, ‘vcoh’: C-O-H triplet bend, ‘da’: H-O-C-C quartet dihedral stretch, ‘dh_o’: H--O distance for hydrogen bonds, ‘do_o’: O—O distance for hydrogen bonds, ‘voh_o’: O-H—O triplet bend, ‘sd’: binary data for each hydrogen bond with True value for intra-molecular bonds and False otherwise, ‘hmap’: matrix containing molecule and atom number for each hydrogen bond at each time_step. Each matrix contains data indexed according to the [time_step, molecule, atom] scheme. T_rear_ccoh is a python array with dihedral rearrangement data for each hydroxyl group hydrogen atom, indexed according to the [time_step, molecule*6 + atom] scheme. T_rear_h is a python array with spatial rearrangement data for each hydrogen atom, indexed according to the [time_step, molecule*14 + atom] scheme.
DOI: 10.17863/cam.15742
title: Data supporting: Formation of long-lived color centers for broadband visible light emission in low-dimensional layered perovskites

description: Data files supporting figures in publication and SI
DOI: 10.17863/cam.81324
title: Data supporting "Morphometric similarity deviations in stimulant use disorder point towards abnormal brain ageing"

description: Morphometric similarity. Information about variables _______ Sex 1: male; Sex 2: female.______ Group 1: healthy controls (Cambridge sample) or CAM_HC; Group 2: stimulant dependent individuals or SID; Group 4: healthy controls (Rockland sample) or HC.
DOI: 10.17863/cam.111155
title: References to article "Progress of emerging non-volatile memory technologies in industry"

description: This dataset contains webpage access snapshots, application notes, and datasheets, which serve as references to the named article. Each entry is named beginning with the reference number with which it appears in the published article. The snapshots are html documents, which can be opened with any typical web browser, and the other documents are in pdf format. The various files contain information about the state of the art of various emerging non-volatile memory technologies in industry, i.e. which kind of products and performance are available from important technology companies such as TSMC, Intel, Samsung, and so on. In contrast to typical academic review papers, the associated article focusses on corporate efforts on these technologies, to provide a perspective of existing commercially available technologies as opposed to academic research advances.
DOI: 10.17863/cam.72839
title: Data for "Efficient Bayesian inference of fully stochastic epidemiological models with applications to COVID-19"

description: python notebooks and data accompanying "Efficient Bayesian inference of fully stochastic epidemiological models with applications to COVID-19", generated using the pyRoss package. See the README file for a full description of the dataset.
DOI: 10.17863/cam.43231
title: Research data supporting "Deep learning as optimal control problems"

description: We consider recent work of Haber and Ruthotto 2017 and Chang et al. 2018, where deep learning neural networks have been interpreted as discretisations of an optimal control problem subject to an ordinary differential equation constraint. We review the first order conditions for optimality, and the conditions ensuring optimality after discretization. This leads to a class of algorithms for solving the discrete optimal control problem which guarantee that the corresponding discrete necessary conditions for optimality are fulfilled. We discuss two different deep learning algorithms and make a preliminary analysis of the ability of the algorithms to generalise. We provide data and associate code for some of the examples reported in the paper.
DOI: 10.17863/cam.72550
title: Research data supporting "Universal Digital Twin – integration of national-scale climate data and energy systems"

description: TBoxes for OntoGasGrid and OntoClimateObservations. Please see README file for details
DOI: 10.25810/fx6e-r462.68
title: European Newspaper Coverage of Climate Change or Global Warming, 2004-2024 - November 2024

description: The Media and Climate Change Observatory Data monitors 126 sources (across newspapers, radio and TV) in 58 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.17863/cam.106485
title: Research data supporting: "Human placental cells are resistant to SARS-CoV-2 infection and replication"

description: Aim: Quantify the permissiveness of placental cells to SARS-CoV-2 infection and ability to support viral release Data Collection: For tissue processing, decidua was removed and the tissue was washed in PBS for 10min. Villi were scraped and digested in 0.2% Trypsin/0.02% EDTA at 37°C for 7/15min. The digest was filtered through a gauze and quenched with FBS. Undigested material was further digested with 1mg/ml Collagenase V supplemented with 10mg/ml DNase for 30/40min at 37°C. After filtering and washing, layer the cell suspension on to a Pancoll gradient ad centrifuge without break for 20min at 3000rpm. For more details and gating strategies, refer to Appios et al., 2021 (Bio Protoc) and Thomas et al., 2021 (JEM. For tissue sections, slides were fixed and permeabilised in ice-cold acetone (5min), washed in PBS, blocked in 2% serum (20min), incubated overnight at 4°C with primary antibodies - ACE2 (rabbit, ab15348), cytokeratin 7 (mouse, M7018). Slides were washed twice in PBS, and incubated with secondary/conjugated antibodies (anti-rabbit AF488, (A-11008), anti-mouse AF555 (A-31570) and CD31-AF700 (303133)) for 1hr in the dark. Slides were washed twice before staining with DAPI (D9542) and mounted ready for imaging. For in vitro assays, cells were infected with BetaCoV (B.1.1.7) strain at MOI 1 for 1hr. Inoculum was removed and cells washed with PBS before replacing with media containing 2% serum. Cells were fixed at 24h in 4% PFA. Cells were permeabilised (0.1% saponin, 10min), and blocked (1% BSA and 0.01% saponin, 20min) before incubating with the primary antibody SARS-CoV-2 spike protein (mouse, GTX632604) for 1hr. After 3 washes (5min each) in blocking solution, cells were incubated with the secondary antibody, anti-mouse AF488 (A-32766) for 45min in the dark. After washing 3 times, nuclei were stained with Hoechst 33342 (62249) for 5min, washed with PBS and maintained in PBS ready for imaging. Data generation: Human primary Hofbauer cells were sorted and data recorded on the BD FACS Aria III using the BD FACSDiva™ software. Tissue sections and cells from infection assays were imaged using the Zeiss LSM780 AxioObserver. Brightness and contrast of images were adjusted using the Brightness/Contrast tool in the FiJi (Just ImageJ) software.
DOI: 10.17863/cam.88680
title: Data supporting "Efficient Vertical Charge Transport in Polycrystalline Halide Perovskites Revealed by Four-Dimensional Tracking of Charge Carriers"

description: The data comprise the data points behind the graphs in each of the figures in the associated manuscript. These include: Fig 1 - PL spectra, absorption spectra, time-dependent PL ratio; Fig 2 - transient PL, transient PL ratio, fitted variance; Fig 3 - transient PL ratio and variance, charge collection efficiency; Fig 4 - radial diffusion data, J-V curves, EQE data; Fig 5 - transient PL and variance data
DOI: 10.17863/cam.83342
title: Research data supporting “Recommendations to enhance breeding bird diversity in managed plantation forests determined using LiDAR”

description: This dataset contains habitat and bird diversity data collected in Thetford Forest. The data were derived from Breeding Bird Surveys, LiDAR structural information and management databases. Further details of the method and statistics are available in Tew et al “Recommendations to enhance breeding bird diversity in managed plantation forests determined using LiDAR” (Ecological Applications). Each row contains data for a management/age class group. Columns ‘Management type’, ‘Age class’ and ‘(Log) total area’ were derived from forest management databases. Columns ‘Horizontal heterogeneity, ‘Gap fraction’, ‘Top canopy height’, ‘Vertical heterogeneity’, ‘Shrub density’ and ‘Canopy density’ were derived from high-resolution remote sensing LiDAR data. ‘Horizontal heterogeneity’, ‘Gap fraction’ and ‘Top canopy height’ are summarised at four different resolutions: 0.5 m, 2 m, 5 m, 10 m. Bird diversity data were derived from bird surveys.
DOI: 10.17863/cam.10980
title: Research data supporting the publication: 'Structural effects in UO$_2$ thin films irradiated with fission-energy Xe ions'

description: Project: PhD work by A.J. Popel: ‘The effect of radiation damage by fission fragments on the structural stability and dissolution of the UO2 fuel matrix’. The Excel file ‘XRD_UO2_films_LSAT’ with raw XRD data supporting Figure 10 and XRD results in the publication: A.J. Popel, V.A. Lebedev, P.G. Martin, A.A. Shiryaev, G.I. Lampronti, R. Springell, S.N. Kalmykov, T.B. Scott, I. Monnet, C. Grygiel, I. Farnan, Structural effects in UO2 thin films irradiated with fission-energy Xe ions, J. Nucl. Mater. 482 (2016) 210-217, https://doi.org/10.1016/j.jnucmat.2016.10.024. The XRD analysis was performed to assess crystallographic structure of the as-produced and irradiated thin films of UO2 on LSAT substrates. The data were generated in June-July 2014 at the Department of Earth Sciences, University of Cambridge, Cambridge, UK. A D8 Bruker diffractometer equipped with a primary Ge monochromator for Cu Ka1 and a Sol-X solid state detector operating in standard Bragg-Brentano geometry was used for the analysis. The samples were spun during signal collection and a zero-background sample holder was used in all cases. The data can be accessed through the University of Cambridge Data Repository.
DOI: 10.17863/cam.100157
title: Research Data Supporting "The Effect of Heat Treatment Temperature on the Mechanical Properties of TIMETAL 575"

description: Data associated with the publication. Acquisition parameters are detailed in the paper. The data in the SEM .zip file additionally contains all of the images used for the image analysis in the associated publication. All images have the heat treatment temperature included in the file name. Abstract of associated publication: TIMETAL® 575 is an α + β alloy reported to possess superior dwell fatigue capabilities over the conventionally used Ti–6Al–4V. The increased performance of this alloy has in part been linked to the presence of fine-scale tertiary α precipitates, which are present in the microstructure following suitable post-forging heat treatments. However, there is currently little understanding as to the extent that these precipitates influence the mechanical properties. When this is coupled with limited information regarding the temperatures over which tertiary α is expected to form, and other microstructural changes which may be occurring concurrent to the evolution of tertiary α in the microstructure, an incomplete picture arises to the true nature of tertiary α on mechanical behaviour. Therefore, this study aims to characterise the mechanical properties of TIMETAL® 575 across a number of different heat treatment temperatures to assess the sensitivity of the mechanical properties on the microstructure.
DOI: 10.5281/zenodo.14510139
title: Weakly sporadic F-hollow lattice 3-polytopes

description: A database containing all weakly sporadic F-hollow lattice 3-polytopes.



Data Description
The text files "weakly_sporadic_non_sporadic_lattice_width1_degree_leq_1.txt", "weakly_sporadic_non_sporadic_lattice_width1_degree2.txt" and "weakly_sporadic_non_sporadic_lattice_width2.txt" contain vertex data for the weakly sporadic F-hollow lattice 3-polytopes which are not sporadic, i.e. they have a lattice projection onto a F-hollow polytope of smaller dimension. The data are sorted by the degree of the polytopes and their lattice width. Each line of the file contains the vertices of one polytope.

The text files "sporadic_mu_4_over_3.txt", "sporadic_mu_5_over_4.txt" and "sporadic_mu_7_over_6.txt" contain vertex data for the sporadic F-hollow lattice 3-polytopes, i.e. they have no lattice projection onto a F-hollow polytope of smaller dimension. The data are sorted by the minimal multiplier, which is either 4/3, 5/4 or 7/6. The text files "sporadic_236.txt", "sporadic_244.txt" and "sporadic_333.txt" contain vertex data for the sporadic F-hollow lattice 3-polytopes, which are affine unimodular equivalent to a lattice subpolytope of the simplex with vertices (0,0,0), (i,0,0), (0,j,0), (0,0,k) in the file "spradic_ijk.txt". Note that a sporadic F-hollow lattice 3-polytope can be a subpolytope of more than one of the simplices. Each line of the file contains the vertices of one polytope.



References
The data in "weakly_sporadic_non_sporadic_lattice_width1_degree2.txt" consist of Gorenstein polytopes of index 2 classified in: Victor Batyrev, Dorothee Juny: "Classification of Gorenstein toric del Pezzo varieties in arbitrary dimension.", Mosc. Math. J. 10, No. 2, 285-316 (2010).

The data for the sporadic examples were generated from subpolytopes of maximal hollow lattice 3-polytopes, which were classified in: Gennadiy Averkov, Christian Wagner, Robert Weismantel: "Maximal lattice-free polyhedra: finiteness and an explicit description in dimension three." Math. Oper. Res. 36, No. 4, 721-742 (2011). and: Gennadiy Averkov, Jan Krümpelmann, Stefan Weltge: "Notions of maximality for integral lattice-free polyhedra: the case of dimension three." Math. Oper. Res. 42, No. 4, 1035-1062 (2017).
DOI: 10.5281/zenodo.14510140
title: Weakly sporadic F-hollow lattice 3-polytopes

description: A database containing all weakly sporadic F-hollow lattice 3-polytopes.



Data Description
The text files "weakly_sporadic_non_sporadic_lattice_width1_degree_leq_1.txt", "weakly_sporadic_non_sporadic_lattice_width1_degree2.txt" and "weakly_sporadic_non_sporadic_lattice_width2.txt" contain vertex data for the weakly sporadic F-hollow lattice 3-polytopes which are not sporadic, i.e. they have a lattice projection onto a F-hollow polytope of smaller dimension. The data are sorted by the degree of the polytopes and their lattice width. Each line of the file contains the vertices of one polytope.

The text files "sporadic_mu_4_over_3.txt", "sporadic_mu_5_over_4.txt" and "sporadic_mu_7_over_6.txt" contain vertex data for the sporadic F-hollow lattice 3-polytopes, i.e. they have no lattice projection onto a F-hollow polytope of smaller dimension. The data are sorted by the minimal multiplier, which is either 4/3, 5/4 or 7/6. The text files "sporadic_236.txt", "sporadic_244.txt" and "sporadic_333.txt" contain vertex data for the sporadic F-hollow lattice 3-polytopes, which are affine unimodular equivalent to a lattice subpolytope of the simplex with vertices (0,0,0), (i,0,0), (0,j,0), (0,0,k) in the file "spradic_ijk.txt". Note that a sporadic F-hollow lattice 3-polytope can be a subpolytope of more than one of the simplices. Each line of the file contains the vertices of one polytope.



References
The data in "weakly_sporadic_non_sporadic_lattice_width1_degree2.txt" consist of Gorenstein polytopes of index 2 classified in: Victor Batyrev, Dorothee Juny: "Classification of Gorenstein toric del Pezzo varieties in arbitrary dimension.", Mosc. Math. J. 10, No. 2, 285-316 (2010).

The data for the sporadic examples were generated from subpolytopes of maximal hollow lattice 3-polytopes, which were classified in: Gennadiy Averkov, Christian Wagner, Robert Weismantel: "Maximal lattice-free polyhedra: finiteness and an explicit description in dimension three." Math. Oper. Res. 36, No. 4, 721-742 (2011). and: Gennadiy Averkov, Jan Krümpelmann, Stefan Weltge: "Notions of maximality for integral lattice-free polyhedra: the case of dimension three." Math. Oper. Res. 42, No. 4, 1035-1062 (2017).
DOI: 10.17863/cam.63099
title: Research data supporting "Incorporating a brief intervention for personalised cancer risk assessment to promote behaviour change into primary care: a multi-methods pilot study"

description: This entry relates to data collected as part of a pilot study of incorporating a brief intervention for personalised cancer risk assessment to promote behaviour change into primary care published in the linked paper. Two datasets are available. The first is the pseudo-anonymised quantitative dataset collected from the questionnaires completed by patients before the intervention, immediately after the intervention and three months after the intervention. The data dictionary for this data is attached within this record. The questionnaires are published as supplementary material within the paper and also included here. The second dataset is the pseudo-anonymised transcripts from the qualitative interviews conducted with patients and healthcare professionals as part of the study. The interview schedules are published as supplementary material within the paper and also included here. Consent was given by participants to share anonymised data with other responsible researchers. As consent was not given to share publically it is not possible to add the data to the repository. Instead, the data are stored within the Primary Care Unit and researchers can request access by contacting Dr Juliet Usher-Smith (jau20@medschl.cam.ac.uk) or PCU_DATA@medschl.cam.ac.uk Applicants will be required to complete a Data Access Agreement that will indicate the criteria for data access and conditions for research use and will incorporate privacy and confidentiality standards to ensure data security.
DOI: 10.17863/cam.26330
title: Research data supporting: Viral infection aids in defence against parasitoid attack in Drosophila

description: The data supports the manuscript “Viral infection aids in defence against parasitoid attack in Drosophila". This folder contains the following files: coinfection.csv: this file contains the number of number of flies and parasitoids that emerged from virus-infected and virus-free larvae that had need parasitised; survival.csv: this has the survival of flies after viral infection or mock infection; viral_load.csv: this has the viral load of unparasitised and parasitised flies that were fed DCV; Figure 1.R plots figure 1 using the data above using the software R; and Figure 2.R plots figure 2 using the data above using the software R.