cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/w75cdpknmc
title: Genomic monitoring of SARS-CoV-2 uncovers an Nsp1 deletion variant that modulates type I interferon response. A study of Lin et al.

description: The SARS-CoV-2 virus, the causative agent of COVID-19, is undergoing constant mutation. Here we utilized an integrative approach combining epidemiology, virus genome sequencing, clinical phenotyping and experimental validation to locate mutations of clinical importance. We identified 35 recurrent variants, some of which are associated with clinical phenotypes related to severity. One variant, containing a deletion in the Nsp1-coding region (Δ500-532) was found in more than 20% of our sequenced samples and associates with higher RT-PCR cycle thresholds and lower serum IFN-β levels of infected patients. Deletion variants in this locus were found in 37 countries worldwide and viruses isolated from clinical samples or engineered by reverse genetics with related deletions in Nsp1 also induce lower IFN-β responses in infected Calu-3 cells. Taken together, our virologic surveillance characterizes recurrent genetic diversity and identified mutations in Nsp1 of biological and clinical importance, which collectively may aid molecular diagnostics and drug design.
DOI: 10.17632/ydk4wvggh3
title: Dermatology Birdwatching List for Learners

description: This document is a supplementary table for the manuscript "Dermatology Elective Curriculum: Introduction to a Dermatology Birdwatching List". It is a compiled list of dermatologic conditions with space for learners to input pertinent notes as the conditions are encountered (virtually or in clinic). This is a learning tool and can be used as a future reference.
DOI: 10.17632/yftvffrkyt
title: A novel mutation in the KITLG gene

description: Familial progressive hyper- and hypopigmentation (FPHH, MIM 145250) is a rare hereditary skin disorder that is predominantly characterized by progressive, diffuse, partly blotchy hyperpigmented lesions intermingled with scattered hypopigmented spots, lentigines and sometimes Cafe-au-lait spots (CALs).Heterozygous mutations of KIT ligand (KITLG, MIM 184745) gene is responsible for FPHH. To date, only eight KITLG mutations were reported to be associated with FPHH and no clear genotype-phenotype correlations had been well established. Here we reported a novel c.104A&gt;T (p.Asn35Ile) mutation of KITLG in a Chinese FPHH family. According to the ACMG guideline 2015, the mutation was initially identified as a ‘Likely Pathogenic’ mutation. As far as we know, only eight different missense KITLG mutations have been reported to cause FPHH. Notably, seven known mutations were clustered in a highly conserved short amino acid sequence VTNNV (amino acids 33-37) . It was known VTNNV domain of KITLG protein (amino acids 33–37), lies within the third b-strand of the protein and is responsible for the binding functions. Both mutations c.104A&gt;T (p.Asn35Ile) and c.101C&gt;T (p.Thr34Ile) found in this study were located located in the VTNNV domain and predicted to be detrimental variations by SIFT and Polyphen-2 tools. Using the Swiss-Model servers, three-dimensional structures of mutant KITLG proteins were found changed as compared with the wild type. Therefore it might change the features of the protein and affect the ligand affinity to its receptor c-Kit, thus may affect migration of melanoblasts, melanosome transfer and melanin synthesis, conferring a phenotype with hyper- and hypopigmentation.
DOI: 10.17632/4dgp9c7bn3
title: Data on the massive necrotic cell death observed in preneoplastic nodules during chemical-induced hepatocarcinogenesis in rats

description: A rat model of chemical-induced hepatocarcinogenesis is a valuable system for clarifying the molecular and cellular mechanisms of cancer initiation. Massive necrotic cell death, a rare phenomenon, was observed in preneoplastic nodules induced in animal livers using the following procedure: Male Sprague-Dawley rats (6 weeks old) were administered a basal diet containing either acetylaminofluorene (AAF; 0.02 % by wt) and N-acetyl-L-cysteine (NAC; 0.25 %) or AAF (0.02 %) and acetylsalicylic acid (ASA, 0.25 %) for 8 or 10 weeks, respectively. The animal livers were fixed with cold acetone, and vibratome-prepared thick sections (25 m in thickness) were immunostained for glutathione S-transferase P-form (GST-P) and stained for -glutamyltranspeptidase (GGT) activity. Photomicrographic images were acquired using a Coolscope digital microscope (Nikon). The collected data set could benefit cancer researchers.
DOI: 10.17632/4my4jt3fx4
title: Survey on the Current Status of Pests on Cotton and Production Practices in South Africa

description: Survey on the Current Status of Pests on Cotton and Production Practices Analysis Data
DOI: 10.17632/6w3n29rv85
title: Pressure Decay Data for Measuring CO2-Water Diffusion Coefficient

description: Carbon dioxide (CO2) storage in deep aquifers is a promising solution to mitigate anthropogenic CO2 emissions. CO2 solubility in brine results in a non-buoyant phase providing an effective trapping mechanism. However, field observations have shown that this diffusion-driven mechanism is a relatively slow process. Accurate determination of CO2 diffusion coefficient is, therefore, essential. The pressure decay method is a widely employed technique for measuring diffusion coefficients of gases in bulk liquids or porous media. It involves introducing a volume of gas on top of the liquid in a closed system and monitoring the pressure decay over time. While the method is generally simple and accurate, artifacts from natural convection can significantly influence the measured diffusion for liquids that exhibit an increase in density due to gas dissolution. This work presents an improved experimental approach for measuring CO2 diffusion coefficients in water in a convection-fee system. Our setup consisted of single open-ended borosilicate capillary tubes filled with water inside a high-pressure vessel filled with CO2 gas. The water-filled capillary tubes were placed with their open ends facing down. This configuration exhibits bottom-top diffusion leading to gravity-stable CO2 diffusion in water free of gravity-induced convection and viscous fingering. The effects of pressure and salinity variations confirm the agreement between our results and values reported in the literature. We also performed experiments and numerical modeling to determine the effective diffusion coefficient of CO2 in a porous medium. The proposed technique can be used to measure the diffusion coefficients for other gas-liquid systems. This data set (data.zip) includes the measured data and the modeling code used in this study, which are: 

1- ExperimentalData.xlsx : measurred pressure decay data to calculate CO2 solubility in water
2- approximateSolution.mlx : analytical solution to fit the experimetnal data using 1 term in the infinite series
3- BaseCase-0M.xlsx : measurred pressure decay data to calculate CO2 solubility in water in porous media, used in approximateSolution.mlx
4- generalSolution.m : analytical solution to fit the experimetnal data using 1, 2 and 20 terms in the infinite series
5- tp_data.mat : time-prssure data set used with generalSolution.m
DOI: 10.17632/8c6gygxngj
title: The negative cross-talk between SAG/RBX2/ROC2 and APC/C E3 ligases in regulation of cell cycle progression and drug resistance

description: These are uncropped western blot figures of this paper published at Cell Reports.
DOI: 10.17632/8xnkpjm4nf
title: Data for Simultaneous production of bio-crude bio-oil via hydrothermal liquefaction and carotenoids

description: The data presented here are related to the research article entitled "Simultaneous production of bio-crude bio-oil via hydrothermal liquefaction and carotenoids via supercritical extraction from Nannochloropsis oceanica and recycling effluent to establish circular processes". This article is submitted in Journal of Cleaner Production. File 1: Data for Figure 1a File 2: Data for Figure 1b File 3: Data for Figure 1 c-g File 4: Data for Figure 4a File 5: Data for Figure 4 b-d
DOI: 10.17632/b23fzm6ccy
title: Table listing all applications of hydrological models in Switzerland

description: Table listing all applications of hydrological models in Switzerland. This Excel document was produced for the paper "Why do we have so many different hydrological models? A review based on the case of Switzerland" submitted to Wires Water.
DOI: 10.17632/b8tw2jg8z7
title: CORDEX Regional Climate Wind Model Data from year 2026 to year 2095

description: A climate projection is the simulated response of the climate system to a scenario of future emission or concentration of greenhouse gases (GHGs) and aerosols, generally derived using climate models. Regional climate projections use Regional Climate Models (RCMs) that dynamically downscale the global projections to provide more regional/local details. This dataset represents a combined CORDEX Regional Climate Wind Model Data from year 2026 to year 2095 as NC file.
DOI: 10.17632/d39m7f64jf
title: Comparative analysis of the first bricks made in the New World (1494-1544)

description: This paper demonstrates the quality of the clays of the bricks manufactured in the New World and their low porosity through a comparative analysis of the bricks manufactured during the first 50 years of conquest and colonization (1494-1544). Samples of bricks and tiles were taken from the sites of the ruins of La Isabella (1494), Concepcion de la Vega (1502), Fort Santiago in Fortaleza of Santo Domingo (1540), and Royal Shipyards (1544).
X-ray Fluorescence (XRF) indicate the elemental chemical analysis, both qualitative and semi-quantitative, of the elements included between fluorine and uranium. The results of the chemical analysis of the case studies are shown in Table 1. The mayor percentage of oxides of chemical composition of the five simples are the following: SiO2, Al2O3, Fe2O3, MgO and CaO typical in a handmade brick. According to some authors, clays suitable for handmade brick should contain Silicon dioxide or Silica (SiO2) between 50-60%, aluminum oxide or alumina (Al2O3) between 21-28 %, Iron (III) oxide or ferric oxide (Fe2O3) between 3-8%, magnesium oxide (MgO) between 2-5%, calcium oxide or lime (CaO) between 1-10%, and other elements.
With the X-ray Diffraction (XRD) was identify the qualitative identification of the mineralogical composition of a crystalline sample and indicate the characteristic peaks of the quartz, albite, and calcite crystalline phases in different proportions (Table 2). The results are related to their sintering level, presented in Table 1.
Porosity is a parameter that influences other properties. In this analysis is expressed as a percentage. Historic clay brick exhibit high porosity, ranging between 20% and 50%. The samples show range between 30,19 to 42,85%, so all the samples were inside the normal ranges (Table 3).
DOI: 10.17632/fzrbk79x5f
title: Molecular basis for the reversible ADP-ribosylation of guanosine bases

description: Gel images and toxicity assays
DOI: 10.17632/jchnbgc477
title: Supplementary data for "Phylogeny predicts tolerance in aquatic animals for only a minority of chemicals" (Coleman and Edmands)

description: Acute (LC50s) and chronic (NOECs) toxicity data derived from aquatic animal species that were surveyed for phylogenetic signal (Pagel's lambda). Data were sourced from the EPA's ECOTOX knowledgebase in July and September 2022.
DOI: 10.17632/jn3bzk4h8m
title: LDHU3_03.0030

description: D-3-phosphoglycerate dehydrogenase-like protein; Leishmania donovani
DOI: 10.17632/jnj5dvpgnx
title: Curated cauldrons: Preserved proteins from early copper alloy vessels illuminate feasting practices in the Caucasian steppe. Wilkin et al., 2023

description: FASTA file of curated database of Eurasian plant and animal proteins.
DOI: 10.17632/k2ybg653bt
title: Analysis of the elevated temperature deformation mechanisms and grain boundary strengthening of the alumina-forming austenitic stainless steel Fe-20Cr-30Ni-2Nb-5Al

description: Raw and processed data for the creep test and strain rate jump test of AFA steel Fe-20Cr-30Ni-2Nb-5Al. This has fixed several things: -True stress and strain are now used for strain rate tests -Relaxation parameter is calculated -Treatment 800C-B has been removed, as their were errors in the experimental methods.
DOI: 10.17632/kzjvyy7kn2
title: EXPLORING THE THEORETICAL FOUNDATIONS UNDERLYING THE CONCEPT AND NATURE OF DEMOCRACY IN INDIA

description: Abstract One salient characteristic of Indian democracy is its reliance on the collaborative efforts of all states in topics pertaining to finance, legislation, and administration, hence facilitating effective government. The primary objective of Nehru in shaping India's democracy and constructing a socialist pattern of society was to ensure the protection of rights, liberty, and freedom for all citizens, with the aim of achieving the greatest good for the largest number of people. Over time, India's democratic system has exhibited characteristics of authoritarianism, characterised by a concentration of power at the central level and a flawed federal structure. This has resulted in a significant disconnect between the central government and state governments, leading to the infringement of civil and political rights during emergencies and under the pretext of state security. Additionally, the presence of centralised institutions and bureaucratic mechanisms further exacerbates this situation. The emergence of regional elites and their pursuit of political power and dominance throughout the liberal era, along with the progressive integration of these capitalist elites into Indian democracy, resulted in the bourgeois character of Indian democracy. The primary objective of NITI Aayog is to foster the development of robust states that can together contribute to the formation of a strong and unified India. This endeavour seeks to address the tendencies of authoritarianism and elitism prevalent within Indian states, with the ultimate goal of enhancing governance and establishing a genuinely democratic society.
DOI: 10.17632/m2sdrt276d
title: LINF_310016400

description: RNA-binding protein | RBP31; Leishmania infantum (strain JPCM5)
DOI: 10.17632/mr46gx4szs
title: Use of maca powder as feed additive in diets of laying quails at different ages: Its effect on performance, eggshell quality, serum, ileum and bone properties

description: The data illustrates the effect of Japanese quails fed different dietary Maca powder levels on the growth indices egg external quality, serum biochemical constituents, hormone concentrations, ileum histomorphology, and bone biomechanical properties of the birds. According to the results obtained, the addition of 1 g/kg maca powder to the diet in quails was effective in improving the eggshell, ileum histomorphology, and bone traits, which worsened with aging, without affecting performance, and the supplementation of 2 g/kg maca powder to the diet was effective in reducing the serum cholesterol concentration.
DOI: 10.17632/nyvpw8g7dz
title: Development of a method for estimating dietary salt intake using the overnight urinary sodium/potassium ratio_20210802

description: There are many patients who need to restrict and assess salt in their diet. However, it is difficult to estimate daily salt intake accurately and easily. Therefore, a method for estimating dietary salt intake using the overnight urinary sodium (Na)/potassium (K) ratio was developed. The study involved 43 healthy adults (13 males, 30 females). From 2018 to 2020, subjects consumed a salt-adjusted diet for 11 to 30 days continuously, and overnight urine was collected daily. Using the previous day’s salt intake as the objective variable, an equation for estimating the salt intake was developed using a general linear model. To verify the accuracy of the estimating equation, the estimated salt intake of the previous day was calculated using our equation and Tanaka’s equation, respectively, and they were compared with the actual salt intake. The results of the analysis showed that Model1 was the optimal model. The Pearson’s product-moment correlation coefficient between the actual and estimated salt intake was r = 0.618 (P &lt; 0.001) and r = 0.573 (P &lt; 0.001) for the Model 1 estimates and Tanaka’s equation estimates, respectively. The percentages of errors within ±30% from the actual salt intake were 64.2% and 58.4% for Model 1 and Tanaka’s equation, respectively. The percentages of errors within ±1.0 g from the actual salt intake were 25.0% and 25.6% for Model 1 and Tanaka’s equation, respectively. The estimating equation developed is simple and may be a useful method for daily monitoring of dietary salt intake.
DOI: 10.17632/p6vnj6ssrf
title: Dataset_5

description: In Dataset_5 are provided the files, scripts and command lines used to construct “Database_E_5106635_sequences.fasta” included in the Data article: Almeida, Daniela; Domínguez-Pérez, Dany; Matos, Ana; Agüero-Chapin, Guillermin; Castaño, Yuselis; Vasconcelos, Vitor; Campos, Alexandre; Antunes, Agostinho. 2020. "Data Employed in the Construction of a Composite Protein Database for Proteogenomic Analyses of Cephalopods Salivary Apparatus" Data 5, no. 4: 110. https://doi.org/10.3390/data5040110.
DOI: 10.17632/r3rnpsgjc5
title: LINF_320015200

description: ubiquitin-conjugating enzyme protein | UBC1 | CDC34
Leishmania infantum (strain JPCM5)
DOI: 10.17632/tgjfsdb4t4
title: Altered serum phospholipids in atopic dermatitis and association with clinical status

description: This dataset is supporting information for the original article entitled "Altered serum phospholipids in atopic dermatitis and association with clinical status." Data are serum lipids concentrations in HC, AD, and Others. Unit of data is nM. 
Abbreviations: AD, atopic dermatitis; Cer, ceramide; HC, healthy controls; LPC, lysophosphatidylcholine; LPE, lysophosphatidylethanolamine; Others, non-AD with atopic comorbidities; PAF, platelet-activating factor; PC, phosphatidylcholine; SM, sphingomyelin; Sph, sphingosine.
DOI: 10.17632/th89xk7wsj
title: Establishing high-resolution (500 μm) chemofacies of depositional environments in an epeiric seaway using μXRF core scanning data.

description: These files provide the Itrax elemental data that were used in this paper. The values for each element are presented in counts per second (cps) and represent the number of photons with a given energy that were fluoresced from the core and outcrop samples. In all cases, "Depth" is presented in millimetres.
DOI: 10.17632/vwb6wfjzrg
title: Main manuscript

description: Hereby I enclose the data of my research paper.
DOI: 10.17632/x857ftsprr
title: Data for: Using a Multilayer Perceptron in IOL calculation

description: The raw data used in the training of MLP.
DOI: 10.17632/xrbcgz7wng
title: Emotional Maturity of Parents: A Prerequisite for Healthy Relations in Scheduled Tribe Families

description: The data supporting this research study assist in justifying the research question – Could relationships be reinforced in the family with the infusion of emotional maturity among parents? The data revolves around prominent themes such as emotion, emotional regulation, emotional responses, emotional maturity, family, and relationship. The data is gathered both at the primary and secondary levels. Preliminary data was gathered through Focus Group Discussion (FGD) among scheduled tribe parents hailing from the district of Ranchi (Jharkhand), and secondary data were assisted through various journal articles and book chapters. Then, the thematic analysis of the data was done to interpret the research findings. The findings state that parental emotional maturity reinforces healthy relations within the family. It highlights the importance of parental maturity in the daily course of family life. Parental emotional maturity enables emerging adults to build healthy relationships with their parents. The research study also states some recommendations which will assist greatly all parents in strengthening their emotional maturity. These suggestions will also motivate emerging adults to imbibe their personal emotional maturity for the total well-being of relationships in the family.
DOI: 10.17632/zy4z8jmhz2
title: Rarias01_RawData

description: Data used in this study corresponded to daily records of milk production and climate variables obtained from a weather station located at the Austral Agricultural Experimental Station (EEAA). The periods of data analysis were considered from December 1st to March 1st of the seasons 2012-2013, season 2015-2016, and season 2016-2017. Hourly records of ambient temperature (ºC), relative humidity (%), wind speed (m/s), and solar radiation (W/m2) were obtained from the weather station located at the EEAA. The dairy farm has approximately 90 ha with a herd of 180 Holstein Friesian dairy cows. The farm has a bi-seasonal calving season (autumn and spring). Cows calving in autumn had an average yield of 22.0 L/cow/day obtained, this figure increases in the case of spring-calving cows, where an average yield of approximately 26.0 L/cow/day is obtained. The feeding of the animals is mainly based on pastures plus concentrates supplied during the two daily milking’s. In addition, depending on the year, cows are offered grass silage as well as summer turnips in the summertime. The climate of the area is temperate-humid with a Mediterranean influence. The average annual temperature is 12°C. Annual precipitation exceeds 2,200 mm/year, but it has a very uneven temporal distribution. During the summer months, in general, water losses by evapotranspiration exceed contributions by precipitation. 
Cows' individual milk production data, per milking and day, were obtained from the ALPRO software installed in the milking parlor of the EEAA. All the data were entered into an Excel spreadsheet, obtaining the averages of temperature, relative humidity, wind speed, and solar radiation of the daily period between 12:00 PM and 19:00 PM were used.
DOI: 10.17632/2tcgdjn7ct
title: Link Lubinus SPII

description: Link Lubinus SPII
DOI: 10.17632/6kt95w5yjx
title: Data for: Experimental variable effects on laser heating of inclusions during Raman spectroscopic analysis

description: Data for this manuscript.
DOI: 10.17632/bpyg7pj8wk
title: 2020 Annual Report of DataDerm - Mendeley Hyperlink 7

description: 2020 Annual Report of DataDerm - Mendeley Hyperlink 7
DOI: 10.17632/d5ybmbcnm4
title: LINF_210020800

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/f44w568wr2
title: Data for: Guidance of venous stent implantation after CDT in patients with acute left lower extremity DVT based on pressure gradient differences between the iliac vein and inferior vena cava: a single-center retrospective study

description: Data were the raw data of venous pressure, Villalta score and vascular patency measured in this study.