cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0201704.10fu
title: SH0201704.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0201705.10fu
title: SH0201705.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0201706.10fu
title: SH0201706.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0201707.10fu
title: SH0201707.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0201708.10fu
title: SH0201708.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0201709.10fu
title: SH0201709.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0201710.10fu
title: SH0201710.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0201711.10fu
title: SH0201711.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0201712.10fu
title: SH0201712.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0201713.10fu
title: SH0201713.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.28777787
title: MGX_processed_with_MTX_steps_annots

description: MGX samples were run like MTX samples, e.g. decontamination with STAR, subject to computational rRNA filtering, de-duplication before kraken2 classification: https://github.com/Chiamh/meta-omics-nf/tree/mainThe purpose of doing this is to show that our findings are not dependent on differences in computational processing of MGX vs MTX reads.
DOI: 10.15468/dl.5tfr5e
title: Occurrence Download

description: A dataset containing 42597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cacyreus marshalli Butler, 1897"
 ]
}

 The dataset includes 42597 records from 646 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005116-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/wdxn7n
title: New species and new records of Belostoma Latreille, 1807 (Insecta: Hemiptera: Belostomatidae) from northeastern Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Stefanello, Fabiano, Azevêdo, Carlos Augusto Silva De (2024): New species and new records of Belostoma Latreille, 1807 (Insecta: Hemiptera: Belostomatidae) from northeastern Brazil. Zootaxa 5497 (4): 591-600, DOI: 10.11646/zootaxa.5497.4.8, URL: http://dx.doi.org/10.11646/zootaxa.5497.4.8AbstractBelostoma zecai Stefanello sp. nov. (Insecta: Hemiptera: Belostomatidae) is described and illustrated based on specimens from the Nascentes do Rio Parnaíba National Park, a protected area in the state of Maranhão, northeastern Brazil. This new species is assigned to the Belostoma fittkaui species group and compared with its congeners. The other four species of the genus, B. amazonum Estévez & Polhemus, 2001, B. foveolatum (Mayr, 1864), B. horvathi Montandon, 1903, and B. ribeiroi De Carlo, 1933, are also recorded from the region. Our findings increase the number of species of Belostoma recorded from Maranhão from 13 to 18, and from northeastern Brazil from 18 to 20.
DOI: 10.15468/qazysx
title: Five new species in the genus Staurosirella (Bacillariophyta) from European freshwater habitats

description: This dataset contains the digitized treatments in Plazi based on the original journal article Van de Vijver, Bart, Peeters, Valérie, Hansen, Iris, Ballings, Petra, de Haan, Myriam (2024): Five new species in the genus Staurosirella (Bacillariophyta) from European freshwater habitats. PhytoKeys 242: 139-160, DOI: 10.3897/phytokeys.242.122458AbstractSeveral populations belonging to the genus Staurosirella have been observed in European rivers that were previously identified as Staurosirella pinnata. In light of the recent taxonomic revisions of the genus Staurosirella, the morphology of the unknown Staurosirella populations has been critically investigated using light and scanning electron microscopy. Following the comparison with previously described Staurosirella species, five taxa could not be identified using the currently available literature on the genus. These five taxa are described as new based on differences in valve outline; shape, size and structure of the apical pore fields; structure of the striae; and the presence, position and structure of the marginal spines. Two new species were described using historic collection material: Staurosirella binodiformis sp. nov. and Svanheurckiana sp. nov. Two new species were observed in samples from rivers in Flanders: S. marginostriata sp. nov. and S. stoksiana sp. nov. whereas a fifth species was observed in rivers from Iceland: S. jonssoniana sp. nov. All new species are compared with similar Staurosirella species worldwide. Notes are added on their ecological preferences derived from both physicochemical data and the associated diatom flora.
DOI: 10.15468/zuschd
title: Abrolophus from Australasia, and the mysterious Mypongia (Trombidiformes: Parasitengona: Erythraeidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Seeman, Owen D., Beard, Jennifer J., Fan, Qing-Hai, Otto, Jürgen C. (2024): Abrolophus from Australasia, and the mysterious Mypongia (Trombidiformes: Parasitengona: Erythraeidae). Zootaxa 5519 (2): 151-189, DOI: 10.11646/zootaxa.5519.2.1, URL: http://dx.doi.org/10.11646/zootaxa.5519.2.1AbstractAn undetermined species of Abrolophus Berlese was intercepted in quarantine by Australian biosecurity on kiwifruit imported from New Zealand. Here, we show that these are the Australian species Abrolophus ripicola (Womersley, 1934), a species known from the post-larval stages only. We present evidence that the larva of A. ripicola is probably the taxon Mypongia brevipes Southcott, 1961, which belongs to a monotypic genus with unique morphology that is placed in a different subfamily to Abrolophus. The larval and post-larval stages we examined share a similar morphology, most notably a reduction of the prodorsal shield and much reduced leg setation. Three M. brevipes larvae were intercepted on kiwifruit imported from New Zealand, and with an additional larval specimen from South Australia, these four specimens represent the first collections of this taxon since its description. Further circumstantial evidence supporting the conspecificity of the two taxa includes a female specimen of A. ripicola collected from Myponga, the type locality of M. brevipes, and larval stages of an undescribed Mypongia collected together with the post-larval stages of an undescribed Abrolophus, from the same locality in South Africa. Keys are provided for the post-larval stages of Abrolophus species in Australia (6 spp.), Papua New Guinea (Abrolophus novaeguinensis (Gunther, 1941 )) and New Zealand (Abrolophus zelandicus Luxton, 1989).
DOI: 10.15468/dznzz2
title: Four new tube-nosed bat species of the genus Murina (Chiroptera, Vespertilionidae) from Xizang Autonomous Region, China, based on morphological and molecular data

description: This dataset contains the digitized treatments in Plazi based on the original journal article Luo, Tao, Mao, Ming-Le, Lan, Chang-Ting, Zhao, Zi-Fa, Wang, Zhong-Lian, Yu, Jing, Wang, Jia-Jia, Yan, Chen-Rui, Xiao, Ning, Zhou, Jiang (2025): Four new tube-nosed bat species of the genus Murina (Chiroptera, Vespertilionidae) from Xizang Autonomous Region, China, based on morphological and molecular data. Zoosystematics and Evolution 101 (3): 1023-1055, DOI: 10.3897/zse.101.144375AbstractThe genus Murina Gray, 1842, recently had four new species discovered in China over the last four years, suggesting its diversity may have been previously underestimated. Herein, we describe four new species — Murina beibengensis sp. nov., Murina medogensis sp. nov., Murina milinensis sp. nov., and Murina yadongensis sp. nov. — based on morphological and genetic evidence from specimens collected during bat diversity surveys conducted in the Xizang Autonomous Region of China over the past three years. Each of these four new species forms an independent lineage on a phylogenetic tree reconstructed using the mitochondrial COI and Cyt b genes, and each is genetically distinct from its congeners. Morphologically, the new species can be distinguished from the 43 recognized congeners by features including forearm length, hair color, and skull morphology. We elevated M. huttoni rubella from a subspecies of M. huttoni to a species based on morphological and genetic evidence. The new species discussed herein increase the number of species in the genus Murina to four worldwide and from 23 to 28 in China. This study not only enriches our understanding of bat species diversity but also underscores the importance of conducting bat surveys in the specialized highland habitats of the Himalayas.
DOI: 10.5281/zenodo.18057800
title: Dataset for QSAR Modeling of Chalcone Derivatives: Comparison of Multiple Linear Regression (MLR) and Artificial Neural Network (ANN) Models

description: Data penelitian QSAR senyawa Chalcone. Di dalamnya terdapat perhitungan-perhitungan teknis yang memudahkan dalam pencarian parameter statistik yang diperlukan. Pelajari rumus Microsoft Excel yang ada pada data-data tersebut.
DOI: 10.15468/fusw7t
title: Info Flora Schweiz - Cannabaceae

description: This dataset contains the digitized treatments in Plazi based on the original url / website Info Flora (2021): Info Flora Schweiz - Cannabaceae., URL: https://www.infoflora.ch/de/flora/cannabaceae.html
DOI: 10.15468/fmf6b9
title: A new group of species of the genus Megalothorax (Collembola, Neelidae) with Gondwanan distribution, and introducing an open interactive identification key of Megalothorax species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Schneider, Clément, Minor, Maria A., D’Haese, Cyrille A. (2023): A new group of species of the genus Megalothorax (Collembola, Neelidae) with Gondwanan distribution, and introducing an open interactive identification key of Megalothorax species. Zootaxa 5228 (2): 101-121, DOI: 10.11646/zootaxa.5228.2.1AbstractMegalothorax Willem, 1900 is a genus of Neelidae (Collembola) with worldwide distribution. Three new species are described here: Megalothorax anterolenis sp. nov. (Patagonia, Chile), Megalothorax tasmanterolenis sp. nov. (Tasmania, Australia) and Megalothorax zealanterolenis sp. nov. (the South Island, New Zealand). New descriptive elements are also provided for Megalothorax rubidus. Two of the new species were sequenced (COI, 16S rDNA, 28S rDNA). Within the genus, the three new species form a new group of species characterised by the absence of secondary granulation dorsally on the head and the thorax, a reduced chaetotaxy of the basomedian field of labium, a bifurcate hair on the maxillary outer lobe and an enlarged S-chaeta (Sa2) on Ant. IV. The molecular based phylogeny further supports the sistership of the two sequenced species. The possible Gondwanan origin of the new group is discussed. Elements of discussion are also provided regarding the possible function of the incomplete coverage of secondary granulation. Finally, an open interactive identification key for the Megalothorax species of the world is introduced.
DOI: 10.15468/6iz4b2
title: Molecular and morphological characterisation of new species in the trapdoor spider genus Aname (Araneae: Mygalomorphae: Nemesiidae) from the Pilbara bioregion of Western Australia

description: This dataset contains the digitized treatments in Plazi based on the original journal article Harvey, Frances S. B., Framenau, Volker W., Wojcieszek, Janine M., Rix, Michael G., Harvey, Mark S. (2012): Molecular and morphological characterisation of new species in the trapdoor spider genus Aname (Araneae: Mygalomorphae: Nemesiidae) from the Pilbara bioregion of Western Australia. Zootaxa 3383: 15-38, URL: http://www.mapress.com/zootaxa/2012/f/zt03383p038.pdfAbstractA study of selected species in the nemesiid spider genus Aname L. Koch 1873 from the Pilbara bioregion of Western Australia was undertaken using molecular and morphological techniques. Bayesian and parsimony analyses of mitochondrial sequence data from the Cytochrome c Oxidase subunit I (COI) gene found evidence for four species, confirming our initial morphological examination of adult male specimens. These four species are here described as A. mellosa n. sp., A. aragog n. sp., A. ellenae n. sp. and A. marae n. sp. Only the female of A. mellosa n. sp. is described.Key words: taxonomy, systematics, barcoding, COI, Anamini, Teylini, Teyl, Pseudoteyl
DOI: 10.15468/53z5xy
title: Multi-local analysis supports the transfer of Omolicna fulva to the genus Agoo and establishment of a new species in the genus from Costa Rica

description: This dataset contains the digitized treatments in Plazi based on the original journal article Barrantes Barrantes, Edwin A., Zumbado Echavarria, Marco A., Bartlett, Charles R., Helmick, Ericka E., Bahder, Brian W. (2025): Multi-local analysis supports the transfer of Omolicna fulva to the genus Agoo and establishment of a new species in the genus from Costa Rica. Zootaxa 5584 (1): 113-125, DOI: 10.11646/zootaxa.5584.1.7, URL: https://doi.org/10.11646/zootaxa.5584.1.7AbstractRecent survey work in Costa Rica has resulted in the discovery of a series of new species of derbid and cixiid planthoppers associated with palms. Here a new species of Agoo was collected by sweeping palms and is described as Agoo keili sp. nov. Sequence data are generated for the new species and Omolicna fulva for the cytochrome c oxidase subunit I (COI) gene, 18S rRNA gene and the D9 to D10 expansion region for the 28S rRNA gene to support the placement of the novel taxon in the genus Agoo. Omolicna fulva is transferred to Agoo, as A. fulvus comb. nov.