cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.60712/si-id44254.1
title: StrainInfo SI-ID 44254.1

description: StrainInfo dataset 44254 about a strain of Streptomyces malaysiensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id44255.1
title: StrainInfo SI-ID 44255.1

description: StrainInfo dataset 44255 about a strain of Gordonia polyisoprenivorans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id44256.1
title: StrainInfo SI-ID 44256.1

description: StrainInfo dataset 44256 about a strain of Desulfotignum balticum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id44307.1
title: StrainInfo SI-ID 44307.1

description: StrainInfo dataset 44307 about a strain of Methanosarcina mazei. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.t3h8b4
title: Occurrence Download

description: A dataset containing 277870 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "OccurrenceStatus is Present",
 "TaxonKey is Turdus merula Linnaeus, 1758"
 ]
}

 The dataset includes 277870 records from 728 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0288512-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id44308.1
title: StrainInfo SI-ID 44308.1

description: StrainInfo dataset 44308 about a strain of Microlunatus lacustris. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id44309.1
title: StrainInfo SI-ID 44309.1

description: StrainInfo dataset 44309 about a strain of Clostridium acidisoli. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id44310.1
title: StrainInfo SI-ID 44310.1

description: StrainInfo dataset 44310 about a strain of Subtercola boreus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id44195.1
title: StrainInfo SI-ID 44195.1

description: StrainInfo dataset 44195 about a strain of Aeropyrum pernix. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id44196.1
title: StrainInfo SI-ID 44196.1

description: StrainInfo dataset 44196 about a strain of Thiocapsa litoralis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id44197.1
title: StrainInfo SI-ID 44197.1

description: StrainInfo dataset 44197 about a strain of Mycobacterium avium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.qewmns
title: Occurrence Download

description: A dataset containing 1896768084 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 1896768084 records from 38428 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013933-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr15925
title: Filamin A Ig-like domains 18-19
DOI: 10.13018/bmr15926
title: N-terminal domain of the Bacillus subtilis helicase-loading protein DnaI
DOI: 10.13018/bmr15927
title: 1H, 13C, 15N NMR resonance assignments of the actinoporin Sticholysin I
DOI: 10.13018/bmr15928
title: Human ARNT C-Terminal PAS Domain, 3 Residue IB slip
DOI: 10.13018/bmr15930
title: Sequence-specific 1H, 15N, and 13C resonance assignments and relaxation parameters for the whole region 4 of Escherichia coli RNA polymerase sigma70 subunit in 10% TFE
DOI: 10.13018/bmr15931
title: Deletions in a surface loop divert the folding of a protein domain into a metastable dimeric form
DOI: 10.13018/bmr15932
title: Solution Structure of the Catalytic Domain of Procaspase-8
DOI: 10.13018/bmr15933
title: NOGO66 in DPC.
DOI: 10.13018/bmr15934
title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for M-crystallin (calcium bound form) in presence of 6 M Gdn-Hcl
DOI: 10.15468/dl.9pj8fk
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.29_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lonchura punctulata"
 ]
}

 The dataset includes 39 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003100-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr15935
title: Pfu RPP29d17-RPP21V14 complex
DOI: 10.13018/bmr15936
title: Sequence-specific 1H, 15N, resonance assignments of nine 1H-{15N} HSQC spectras for the whole region 4 of Escherichia coli RNA polymerase sigma70 subunit recorded at TFE concentrations increasing in the range of 0-30%
DOI: 10.13018/bmr15937
title: Solution structure of the equine infectious anemia virus p9 gag protein
DOI: 10.13018/bmr15938
title: p190-A RhoGAP FF1 domain
DOI: 10.13018/bmr15939
title: Solution Structure of FOXO3a Forkhead domain
DOI: 10.13018/bmr15940
title: Association of subunit d (Vma6p) and E (Vma4p) with G (Vma10p) and the NMR solution structure of subunit G (G1-59) of the Saccharomyces cerevisiae V1VO ATPase
DOI: 10.13018/bmr15941
title: Solution structure of a zinc-binding methionine sulfoxide reductase
DOI: 10.13018/bmr15942
title: 1H, 13C and 15N assignments for rrm2 domain of PABP1
DOI: 10.13018/bmr15943
title: Solution NMR Structure of protein of unknown function yegP from E. coli. Ontario Center for Structural Proteomics target EC0640_1_123 Northeast Structural Genomics Consortium Target ET102.
DOI: 10.13018/bmr15944
title: Structural Basis for the Regulation of p53 Function by p300
DOI: 10.13018/bmr15945
title: MDM2 N-terminal domain
DOI: 10.13018/bmr15946
title: Solution structure of a paralog-specific Mena binder by NMR
DOI: 10.13018/bmr15948
title: 1H, 13C, and 15N Chemical Shift Assignments for the RING finger of the E3 ubiquitin ligase Arkadia (RNF111)
DOI: 10.15468/dl.ysww7y
title: Occurrence Download

description: A dataset containing 2168418 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arenaria interpres"
 ]
}

 The dataset includes 2168418 records from 938 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003044-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr15949
title: 1H, 15N, 13C Resonance Assignments of the Reduced and Active Form of Human Protein Tyrosine Phosphatase, PRL-1
DOI: 10.13018/bmr15950
title: solution structure of E.Coli SlyD
DOI: 10.13018/bmr15951
title: HCV p7 tm2
DOI: 10.13018/bmr15952
title: S100A13-C2A
DOI: 10.13018/bmr15953
title: H55K mutant of LC8 at pH 6.7 from Drosophila Melanogaster
DOI: 10.13018/bmr15954
title: human eIF5A
DOI: 10.13018/bmr15955
title: Green Proteorhodopsin
DOI: 10.13018/bmr15956
title: NMR structure analysis of a BMP receptor
DOI: 10.13018/bmr15957
title: Solution structure of the HIV-1 p6 C-terminal domain
DOI: 10.13018/bmr15958
title: NMR Structure of Shq1p N-terminal domain
DOI: 10.13018/bmr15959
title: Backbone 1H and 15N Chemical Shift Assignments for the Phosphotyrosine Binding Domain of Insulin Receptor Substrate 1 in the Apo and Phosphopeptide Bound Forms
DOI: 10.13018/bmr15960
title: Solution structure of human acidic fibroblast growth factor in complex with anti-angiogenic drug inositol hexaphosphate (IP6)
DOI: 10.13018/bmr15961
title: Backbone and Side chain 1H, 13C, and 15N Chemical Shift Assignments for Microneme protein 2 Associated protein
DOI: 10.13018/bmr15962
title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for the heme bound form of Truncated HasAp.
DOI: 10.13018/bmr15963
title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for the heme bound form of Full-Length HasAp.
DOI: 10.13018/bmr15964
title: Solution structure of Oxidised ERp18
DOI: 10.13018/bmr15965
title: Structural Transitions of the N Terminus of a Short Non-Muscle Tropomyosin upon Binding to the C Terminus in Solution
DOI: 10.5281/zenodo.18782700
title: TuberIndex: An open-access dataset of French-language literature on true truffles (Tuberaceae) and their ecology

description: TuberIndex is the first open-access dataset compiling literature on true truffles (Tuberaceae) and their ecology.Version 1.0 compiles five centuries of French-language literature on Tuberaceae, documenting the rich diversity of truffle–plant and truffle–fungi interactions reported in technical reports, academic works, and popular writings.

The dataset indexes 493 documents and reports 3,508 records of ecological interactions involving 26 truffle taxa, 418 plant taxa, and 53 fungal taxa. Each interaction is compiled with various metadata, including information on the effect of the interaction on the truffle and the role of the interactor.

It is organized into three main CSV files (bibliographic data, interaction data, and taxonomy reference), complemented by a BibTeX export and a raw archive to ensure transparency and reproducibility.

TuberIndex aims to support scientific research by providing a comprehensive resource on truffle–plant and truffle–fungi interactions, while also enhancing knowledge transfer to practitioners in truffle cultivation.

The dataset is released under a CC BY 4.0 licence to ensure open reusability for research, education, and practice.
DOI: 10.13018/bmr15966
title: Solution NMR structure of integral membrane protein DsbB
DOI: 10.13018/bmr15967
title: Structural characterization of IscU and its interaction with HscB
DOI: 10.13018/bmr15968
title: Backbone chemical shift assignments for the UBA domain of Swa2p
DOI: 10.15468/dl.uazzxy
title: Occurrence Download

description: A dataset containing 2902 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "TaxonKey is Sarcoptiformes"
 ]
}

 The dataset includes 2902 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003099-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr15969
title: Heteronuclear NMR assignments for the dimeric human hepatitis B virus core protein under capsid dissociating conditions
DOI: 10.13018/bmr15970
title: SOLUTION STRUCTURE OF THE LSM DOMAIN OF DROSOPHILA MELANOGASTER TRAL (TRAILER HITCH)
DOI: 10.13018/bmr15971
title: SOLUTION STRUCTURE OF THE LSM DOMAIN OF DROSOPHILA MELANOGASTER TRAL (TRAILER HITCH)
DOI: 10.15468/dl.puuwuu
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Luciobarbus albanicus)",
 "Geometry POLYGON((19.0 42.0, 19.0 34.5, 29.7 34.5, 29.7 42.0, 19.0 42.0))"
 ]
}

 The dataset includes 197 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003101-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr15972
title: 1H, 13C and 15N resonance assignments of the PDZ of MAST205 in complex with the C-terminal tail from the rabies virus glycoprotein
DOI: 10.13018/bmr15973
title: HGF-binding peptide-10
DOI: 10.13018/bmr15974
title: Chemical shifts of the b-b'-x region of human protein disulfide isomerase
DOI: 10.13018/bmr15975
title: Sequence-specific 1H, 15N, and 13C resonance assignments and relaxation parameters for the whole region 4 of Escherichia coli RNA polymerase sigma70 subunit in 30% TFE
DOI: 10.13018/bmr15977
title: Backbone and side chain 1H, 13C and 15N chemical shifts for the C-terminal domain of CdnL from Myxococcus xanthus
DOI: 10.13018/bmr15978
title: Lipopolysaccharide Bound Structures of the Active Fragments of Fowlicidin-1, a Cathelicidin Family of Antimicrobial and Antiendotoxic Peptide from Chicken, Determined by Transferred Nuclear Overhauser Effect Spectroscopy
DOI: 10.13018/bmr15979
title: Lipopolysaccharide Bound Structures of the Active Fragments of Fowlicidin-1, a Cathelicidin Family of Antimicrobial and Antiendotoxic Peptide from Chicken, Determined by Transferred Nuclear Overhauser Effect Spectroscopy
DOI: 10.6084/m9.figshare.31389149
title: Analyses of receptor binding specificity of highly pathogenic avian influenza A (H5N1) viruses isolated from felines in South Korea, 2023

description: Influenza viruses infect host cells by binding to specific sialic acid receptors present on the surface of target cells, and this receptor binding exhibits specificity depending on cell type and host species. Avian influenza A (H5N1) viruses typically bind preferentially to α2,3-linked sialic acid receptors, although some strains have been reported to acquire binding affinity for the human-type α2,6-linked sialic acid receptors, highlighting the need for ongoing receptor binding analyses of highly pathogenic avian influenza (HPAI) viruses. Notably, in July 2023, two distinct cases of fatal cluster infections in felines caused by HPAI H5N1 viruses were reported for the first time in South Korea (Gwanak and Yongsan). Characterization of the isolated strains revealed high pathogenicity and efficient contact transmission in mammals. In this study, we investigated the receptor binding specificity of the H5N1 viruses associated with these feline outbreaks to assess their potential threat to human health. Our findings demonstrated that both felines-derived and avian-derived H5N1 isolates retained strong binding affinity to avian-type α2,3-linked sialic acid receptors, while showing no detectable binding to human-type α2,6-linked sialic acid receptors. These results provide experimental evidence that the feline H5N1 isolates retain avian-type receptor specificity, indicating a low potential for efficient human-to-human transmission.
DOI: 10.13018/bmr15980
title: Lipopolysaccharide Bound Structures of the Active Fragments of Fowlicidin-1, a Cathelicidin Family of Antimicrobial and Antiendotoxic Peptide from Chicken, Determined by Transferred Nuclear Overhauser Effect Spectroscopy
DOI: 10.6084/m9.figshare.31389149.v2
title: Analyses of receptor binding specificity of highly pathogenic avian influenza A (H5N1) viruses isolated from felines in South Korea, 2023

description: Influenza viruses infect host cells by binding to specific sialic acid receptors present on the surface of target cells, and this receptor binding exhibits specificity depending on cell type and host species. Avian influenza A (H5N1) viruses typically bind preferentially to α2,3-linked sialic acid receptors, although some strains have been reported to acquire binding affinity for the human-type α2,6-linked sialic acid receptors, highlighting the need for ongoing receptor binding analyses of highly pathogenic avian influenza (HPAI) viruses. Notably, in July 2023, two distinct cases of fatal cluster infections in felines caused by HPAI H5N1 viruses were reported for the first time in South Korea (Gwanak and Yongsan). Characterization of the isolated strains revealed high pathogenicity and efficient contact transmission in mammals. In this study, we investigated the receptor binding specificity of the H5N1 viruses associated with these feline outbreaks to assess their potential threat to human health. Our findings demonstrated that both felines-derived and avian-derived H5N1 isolates retained strong binding affinity to avian-type α2,3-linked sialic acid receptors, while showing no detectable binding to human-type α2,6-linked sialic acid receptors. These results provide experimental evidence that the feline H5N1 isolates retain avian-type receptor specificity, indicating a low potential for efficient human-to-human transmission.
DOI: 10.6084/m9.figshare.31292445.v1
title: PLIN3-triggered lipophagic flux releases FFAs to facilitate CSFV propagation

description: Viruses hijack host metabolic resources for replication. Previous studies have shown that classical swine fever virus (CSFV) infection induces host lipid metabolic reprogramming.However, research into the exact regulatory mechanisms between CSFV and lipid metabolism remains limited. Lipophagy refers to the degradation of lipid droplet contents to release free fatty acids(FFAs), CSFV induces autophagy to promote its replication, the regulatory mechanism between CSFV and lipophagy is unclear. In this study, we found that lipid droplets(LDs) initially accumulate and then decrease following CSFV infection. Autophagy activity was negatively correlated with lipid drople levels. Subsequent experiments revealed that CSFV induces lipophagy in HSCs (Hepatic stellate cells)and upregulates PLIN3(perilipin 3) expression, a LD-associated protein that facilitates viral replication. Further studies demonstrated that PLIN3 activates the AMPK signaling pathway to promote lipophagy-mediated free fatty acid (FFA) release. This FFA increase could be blocked by autophagy inhibitors. Notably, exogenous FFA addition reversed the shPLIN3-induced impairment of CSFV replication. Overall, this finding provides new insights into the mechanisms of virus-host lipid metabolism interactions.
DOI: 10.6084/m9.figshare.31389149.v1
title: Analyses of receptor binding specificity of highly pathogenic avian influenza a (H5N1) viruses isolated from felines in South Korea, 2023

description: Influenza viruses infect host cells by binding to specific sialic acid receptors present on the surface of target cells, and this receptor binding exhibits specificity depending on cell type and host species. Avian influenza A (H5N1) viruses typically bind preferentially to α2,3-linked sialic acid receptors, although some strains have been reported to acquire binding affinity for the human-type α2,6-linked sialic acid receptors, highlighting the need for ongoing receptor binding analyses of highly pathogenic avian influenza (HPAI) viruses. Notably, in July 2023, two distinct cases of fatal cluster infections in felines caused by HPAI H5N1 viruses were reported for the first time in South Korea (Gwanak and Yongsan). Characterization of the isolated strains revealed high pathogenicity and efficient contact transmission in mammals. In this study, we investigated the receptor binding specificity of the H5N1 viruses associated with these feline outbreaks to assess their potential threat to human health. Our findings demonstrated that both felines-derived and avian-derived H5N1 isolates retained strong binding affinity to avian-type α2,3-linked sialic acid receptors, while showing no detectable binding to human-type α2,6-linked sialic acid receptors. These results provide experimental evidence that the feline H5N1 isolates retain avian-type receptor specificity, indicating a low potential for efficient human-to-human transmission.
DOI: 10.13018/bmr15981
title: Solution NMR Structure of Cgi121 from Methanococcus jannaschii. Northeast Structural Genomics Consortium Target MJ0187
DOI: 10.6084/m9.figshare.31420820
title: Analytical comparison of selected international tools for the risk assessment of upper-limbs biomechanical overload in repetitive tasks

description: This study compared eight upper-extremity risk assessment tools applied to five different manual tasks. The aim is to provide users with insight into how the tools compare and to contribute to the ongoing revision of the ISO 11228-3 Standard. Eight upper limbs risk assessment tools were compared (ACGIH<sup>®</sup> HA, DUET, EAWS4, HARM, OCRA index, OCRA checklist, RSI, and RULA). The predictive or concurrent validity of each tool was described and considered. Tool merits and limitations, such as underestimating high action frequencies, static postures, or upper limb areas to study, were described. The ability of the tools to distinguish risk levels was examined. All tools differentiated the risk level of the five tasks, except HARM and RULA, which showed similar risk levels for all tasks. Suggestions are provided to prospective users for choosing tools appropriate to their application, with an emphasis on predictive validity to ensure more reliable risk assessment results. The objective of this paper is to provide guidance on the selection of the most suitable tools. The authors compared eight tools (ACGIH<sup>®</sup> HA, DUET, EAWS4, HARM, OCRA index, OCRA checklist, RSI, and RULA) by applying them to five representative tasks. A tool with good predictivity is more likely to provide reliable results in terms of risk assessment.
DOI: 10.6084/m9.figshare.31420820.v1
title: Analytical comparison of selected international tools for the risk assessment of upper-limbs biomechanical overload in repetitive tasks

description: This study compared eight upper-extremity risk assessment tools applied to five different manual tasks. The aim is to provide users with insight into how the tools compare and to contribute to the ongoing revision of the ISO 11228-3 Standard. Eight upper limbs risk assessment tools were compared (ACGIH<sup>®</sup> HA, DUET, EAWS4, HARM, OCRA index, OCRA checklist, RSI, and RULA). The predictive or concurrent validity of each tool was described and considered. Tool merits and limitations, such as underestimating high action frequencies, static postures, or upper limb areas to study, were described. The ability of the tools to distinguish risk levels was examined. All tools differentiated the risk level of the five tasks, except HARM and RULA, which showed similar risk levels for all tasks. Suggestions are provided to prospective users for choosing tools appropriate to their application, with an emphasis on predictive validity to ensure more reliable risk assessment results. The objective of this paper is to provide guidance on the selection of the most suitable tools. The authors compared eight tools (ACGIH<sup>®</sup> HA, DUET, EAWS4, HARM, OCRA index, OCRA checklist, RSI, and RULA) by applying them to five representative tasks. A tool with good predictivity is more likely to provide reliable results in terms of risk assessment.
DOI: 10.13018/bmr15983
title: NMR SOLUTION STRUCTURE FOR ShK-192: A POTENT KV1.3-SPECIFIC IMMUNOSUPPRESSIVE POLYPEPTIDE
DOI: 10.13018/bmr15986
title: Chemical Shift Assignments of the Fibronectin 8-9FnI Domain Pair in Complex with a Type-I Collagen Peptide