cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/2bad7bf2a2c8643b38f1ce8f310032a0
title: Supplemental data Effects of imidacloprid exposure on honey bee colony growth and activity

description: To better understand how exposure to a low (5 ppb) concentration of imidacloprid affects honey bee colonies we conducted five field experiments involving a total of 54 bee colonies. In each experiment, bee colonies in one treatment group were fed sugar syrup adulterated with 5ppb imidacloprid over six weeks, and colonies in the other group were fed unadulturated sugar syrup over the same time period. Treatments were intended to simulate nectar collection by the colonies. No commercial agriculture existed within 10 km of the sites. We collected data from hive assessments, including adult bee mass and mass of food resources, and the total surface area of capped brood; and we collected data from sensors, including continuous hive weight, internal temperature and, for two years of the study, internal CO2 concentration. We measured Varroa mite fall before and after treatment each year of the study, and for 3 years of the study we measured the dry weight of newly-emerged adult bees.
DOI: 10.6084/m9.figshare.15161274.v1
title: Notebooks and code

description: Jupyter notebooks and code used to analyze data and to generate figures.
DOI: 10.6084/m9.figshare.15152388
title: Phylogenetic tree of metagenomic assembled genomes (MAGs)

description: The tree was generated using the Genome Taxonomy Database Toolkit (GTDB-Tk).
DOI: 10.6084/m9.figshare.15152388.v3
title: Phylogenetic tree of metagenomic assembled genomes (MAGs)

description: The tree was generated using the Genome Taxonomy Database Toolkit (GTDB-Tk).
DOI: 10.5281/zenodo.5425535
title: Use of synthetic aperture radar data for the determination of vegetation indices

description: Database for the article "Use of synthetic aperture radar data for the determination of vegetation indices"
DOI: 10.5281/zenodo.5425534
title: Use of synthetic aperture radar data for the determination of vegetation indices

description: Database for the article "Use of synthetic aperture radar data for the determination of vegetation indices"
DOI: 10.25919/9vq3-0r59
title: Parkes observations for project P1068 semester 2021APRS_19

description: In the fast-moving world of Fast Radio Bursts (FRBs), the critical question of what fraction of FRBs emit repeat bursts remains unanswered. Of order 20 repeating FRBs are now known, and their spectro-temporal properties hint at differences with apparently non-repeating bursts - the poor statistics preclude a definitive diagnosis. FRB 180301 is a promising source for further study for multiple reasons: it is an active repeater similar to the FRB 121102 and the most active FRB source visible to Parkes, and it shows diverse polarization properties across the repeat bursts. We have detected multiple repeat bursts from this source in our campaign last semester. The signal-to-noise ratio (S/N) of these detections are not sufficiently significant to measure their spectro-polarimetric properties. We request Parkes observations with the UWL receiver to continue the monitoring of this FRB source in order to characterize the broadband emission properties. Some of the key goals for these future observations are: to constrain the repetition rate, identify any variation of pulse characteristics over time, measure the polarimetric properties and provide insight into the emission mechanisms. The diverse polarization angle swings in the FAST detections and significant circular polarization in the original Parkes detection indicate the progenitor is embedded in an extreme magneto-ionic environment with complex field structure that has not been seen before. Understanding these diverse polarization properties from this source could be the key to distinguish repeater sources from the apparent non-repeaters ones.
DOI: 10.6084/m9.figshare.16569399
title: Doctoral Exam Survey Results

description: These are aggregate survey results from a survey distributed in September 2020.
DOI: 10.25810/d8wn-hn36
title: Data for "Disturbance and valley confinement: controls on floodplain LW and organic matter jam deposition in the Colorado Front Range, USA"

description: Organic matter dynamics (entrainment, transport, deposition) can influence ecogeomorphic complexity in rivers. However, the depositional controls on downed, large wood (LW) and coarse particulate organic matter (CPOM) on floodplains have rarely been assessed. We investigate the influence of different disturbance histories, as well as geomorphology and forest stand density, on the deposition of LW and CPOM accumulations, or jams, between two adjacent drainages (West Creek, North Fork Big Thompson) in the Colorado Front Range. Both basins recently experienced an extreme flood, but West Creek experienced a larger flood peak as well as a recent upstream fire. We also analyse jam fabric (LW piece orientation) between floodplain and in-channel jam types. We measured LW and CPOM jams on the North Fork to compute jam frequencies (jams ha-1) and loads (m3 ha-1), and we compare these data to a previously published dataset from West Creek. Average LW jam frequencies (70.4 jams ha-1) and loads (678.6 m3 ha-1) on West Creek were significantly higher than on the North Fork (frequency: 14.8 jams ha-1; load: 94.3 m3 ha-1). Average CPOM jam frequencies (West Creek: 19.0 jams ha-1; North Fork: 15.1 jams ha-1) and loads (West Creek: 10.70 m3 ha-1; North Fork: 9.98 m3 ha-1) were not significantly different between basins. A larger flood peak, likely enhanced by a recent upstream fire and a more confined valley bottom, resulted in greater deposition of LW jams on West Creek compared to the North Fork. Confinement played an additional role in controlling jam deposition, where a wider valley bottom resulted in reduced jam frequencies and loads. Floodplain jam types oriented parallel to the stream were significantly than other jam types. This work will inform river restoration efforts in semi-arid regions and provide concrete examples of how LW deposits on floodplains for numerical models that incorporate LW. 

The data was collected as part of research for the following manuscript:

Guiney, M.R., & Lininger, K.B. (2021). Disturbance and valley confinement:controls on floodplain large wood and organic matter jam deposition in the Colorado Front Range, USA [Manuscript submitted for publication]. Department of Geography, University of Colorado Boulder
DOI: 10.6084/m9.figshare.16569378
title: Antibody Profile Comparison Against MSP1 Antigens of Mul-tiple Plasmodium Species in Human Serum Samples from Two Different Brazilian Populations Using a Multiplex Serological Assay

description: This datasheet refers to the data presented in the publication under the title: Antibody Profile Comparison Against MSP1 Antigens of Multiple <i>Plasmodium</i> Species in Human Serum Samples from Two Different Brazilian Populations Using a Multiplex Serological Assay. <i>Pathogens </i><b>2021.</b><br>
DOI: 10.6084/m9.figshare.16569378.v1
title: Antibody Profile Comparison Against MSP1 Antigens of Mul-tiple Plasmodium Species in Human Serum Samples from Two Different Brazilian Populations Using a Multiplex Serological Assay

description: This datasheet refers to the data presented in the publication under the title: Antibody Profile Comparison Against MSP1 Antigens of Multiple <i>Plasmodium</i> Species in Human Serum Samples from Two Different Brazilian Populations Using a Multiplex Serological Assay. <i>Pathogens </i><b>2021.</b><br>
DOI: 10.6084/m9.figshare.14036648
title: power spectra of BOLD in WM

description: shared data for paper "<b>Power spectra reveal distinct BOLD resting-state time courses in white matter</b>"<br>
DOI: 10.6084/m9.figshare.14036648.v2
title: power spectra of BOLD in WM

description: shared data for paper "<b>Power spectra reveal distinct BOLD resting-state time courses in white matter</b>"<br>
DOI: 10.6084/m9.figshare.14036648.v1
title: power spectra of BOLD in WM

description: shared data for paper "<b>Power spectra reveal distinct BOLD resting-state time courses in white matter</b>"<br>
DOI: 10.5517/ccdc.csd.cc228q25
title: CCDC 1914996: Experimental Crystal Structure Determination

description: Related Article: Jingjing Bi, Qiang Tan, Hao Wu, Qingfeng Liu, Guisheng Zhang|2021|Org.Lett.|23|6357|doi:10.1021/acs.orglett.1c02141
DOI: 10.5517/ccdc.csd.cc228q36
title: CCDC 1914997: Experimental Crystal Structure Determination

description: Related Article: Jingjing Bi, Qiang Tan, Hao Wu, Qingfeng Liu, Guisheng Zhang|2021|Org.Lett.|23|6357|doi:10.1021/acs.orglett.1c02141
DOI: 10.5517/ccdc.csd.cc27839y
title: CCDC 2063369: Experimental Crystal Structure Determination

description: Related Article: Nandagopal Bar, Pranesh Chowdhury, Debiprasad Roy, Sangita Adhikari, Sonjoy Mondal, Gourab Kanti Das, Swapan Kumar Chandra|2021|J.Photochem.Photobiol.A:Chem.|420|113505|doi:10.1016/j.jphotochem.2021.113505
DOI: 10.5517/ccdc.csd.cc27hd8f
title: CCDC 2070374: Experimental Crystal Structure Determination

description: Related Article: Eric Cots, Jeroen Rintjema, Fernando Bravo, Kilian Muñiz|2021|Org.Lett.|23|6429|doi:10.1021/acs.orglett.1c02252
DOI: 10.5517/ccdc.csd.cc27qhj0
title: CCDC 2077202: Experimental Crystal Structure Determination

description: Related Article: Tao Wang, Zongyuan Tang, Han Luo, Yi Tian, Mingchuan Xu, Qixing Lu, Baosheng Li|2021|Org.Lett.|23|6293|doi:10.1021/acs.orglett.1c02087
DOI: 10.5517/ccdc.csd.cc27qhk1
title: CCDC 2077203: Experimental Crystal Structure Determination

description: Related Article: Tao Wang, Zongyuan Tang, Han Luo, Yi Tian, Mingchuan Xu, Qixing Lu, Baosheng Li|2021|Org.Lett.|23|6293|doi:10.1021/acs.orglett.1c02087
DOI: 10.5281/zenodo.5420588
title: An Assessment of Nonhydrostatic and Hydrostatic Dynamical Cores at Seasonal Time Scales in the Energy Exascale Earth System Model (E3SMv1)

description: This is the companion data for the manuscript of the same title, submitted to Journal of Advances in Modeling Earth Systems on 09/03/2021. <strong>summer: </strong>this folder contains part of the model outputs I ran on NERSC Cori in 2020-2021 corresponding to the summer simulations in the manuscript. <strong>winter: </strong>this folder contains part of the outputs I ran on NERSC Cori in 2020-2021 corresponding to the winter simulations in the manuscript. <strong>ne256: </strong>this folder contains part of the outputs I ran on NERSC Cori in 2021 corresponding to the ne256 simulations in the manuscript. <strong>bubble</strong>: this folder includes the namelists used in the rising bubble experiments. <strong>script: </strong>this folder includes an example of a script to generate the realistic SCREAM simulation Unfortunately, model outputs are too large (~ 30 TB). Therefore, I only provide mean data, used directly to generate figures, in this repository. All model output are archived on tape at NERSC. For more details, refer to the manuscript, or contact me (wrliu@ucdavis.edu).
DOI: 10.5281/zenodo.5135838
title: An Assessment of Nonhydrostatic and Hydrostatic Dynamical Cores at Seasonal Time Scales in the Energy Exascale Earth System Model (E3SMv1)

description: This is the companion data for the manuscript of the same title, submitted to Journal of Advances in Modeling Earth Systems on 09/03/2021. <strong>summer: </strong>this folder contains part of the model outputs I ran on NERSC Cori in 2020-2021 corresponding to the summer simulations in the manuscript. <strong>winter: </strong>this folder contains part of the outputs I ran on NERSC Cori in 2020-2021 corresponding to the winter simulations in the manuscript. <strong>ne256: </strong>this folder contains part of the outputs I ran on NERSC Cori in 2021 corresponding to the ne256 simulations in the manuscript. <strong>bubble</strong>: this folder includes the namelists used in the rising bubble experiments. <strong>script: </strong>this folder includes an example of a script to generate the realistic SCREAM simulation Unfortunately, model outputs are too large (~ 30 TB). Therefore, I only provide mean data, used directly to generate figures, in this repository. All model output are archived on tape at NERSC. For more details, refer to the manuscript, or contact me (wrliu@ucdavis.edu).
DOI: 10.25810/39x0-pt09
title: Data Set for "Impact of Hydrogen Sulfide on Photochemical Haze Formation in Methane/Nitrogen Atmospheres"

description: Data set for the published article "Impact of Hydrogen Sulfide on Photochemical Haze Formation in Methane/Nitrogen Atmospheres" by Nathan W Reed, Eleanor C Browne, and Margaret A Tolbert. Published in ACS Earth and Space Chemistry. Data for aerosol mass spectra, particle mobility diameter, and vacuum aerodynamic diameter discussed and presented in the publication.
DOI: 10.5519/qd.stdsa3mw
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.6084/m9.figshare.16569498.v1
title: Multi-parametric analysis of speech timing in identical twin pairs and cross-pair comparisons

description: The present data derives from a Ph.D. research on the inter-speaker discriminatory potential of speech timing paramaters in comparisons involving genetically-related and non-genetically related speakers.<br><br>In total, a set of 11 temporal speech parameters were analyzed, including macro, micro, and pause-related temporal parameters, as described below:<br><br>Speech rate (SRATE): defined as the number of V-V units in each speech chunk divided by its total duration (V-V units/second), including silent and filled pauses.<br>Articulation rate I (ARTRATE I): defined as the number of V-V units in each speech chunk divided by its total duration (V-V units/second), excluding only silent pauses.<br>Articulation rate II (ARTRATE II): defined as the number of V-V units contained in each speech chunk divided by its total duration (V-V units/second), excluding silent pauses and lengthened vowels.<br>Stress group duration (SGDUR): defined as the interval corresponding to two consecutive salient V-V units (in second), i.e., those units for which a duration increase has been automatically detected. Each stress group ends with a salient V-V unit.<br>V-V units duration (VVDUR I): syllable-sized units defined as all the segments uttered between two consecutive vowel onsets (in millisecond). Both salient and non-salient V-V units are included in this parameter.<br>V-V units duration (VVDUR II): the aforementioned phonetic unit corresponding solely to non-salient V-V units (in millisecond), represented by those units for which a duration increase has not been automatically detected.<br>Vowel duration (VOWEL DUR): defined as the duration of produced oral monophthongs (in millisecond).<br>Silent pauses duration (SILPAUSES): silent pauses (in millisecond) equal or superior to 100 ms, a threshold commonly applied in automatic measurements, as to prevent occlusion phases of plosives from being counted.<br>Filled pauses (FILPAUSES): defined as vowel prolongations equal or superior to 100 ms, perceived as hesitations/filled pauses (in millisecond).<br>All pauses (ALLPAUSES): combination of silent and filled pauses (in millisecond), i.e., lengthened vowels before silent pauses or in hesitations.<br>Inter-silent pauses intervals (IPI): defined as the interval comprising the speech production between two consecutive silent pauses (in second).
DOI: 10.6084/m9.figshare.16569498
title: Multi-parametric analysis of speech timing in identical twin pairs and cross-pair comparisons

description: The present data derives from a Ph.D. research on the inter-speaker discriminatory potential of speech timing paramaters in comparisons involving genetically-related and non-genetically related speakers.<br><br>In total, a set of 11 temporal speech parameters were analyzed, including macro, micro, and pause-related temporal parameters, as described below:<br><br>Speech rate (SRATE): defined as the number of V-V units in each speech chunk divided by its total duration (V-V units/second), including silent and filled pauses.<br>Articulation rate I (ARTRATE I): defined as the number of V-V units in each speech chunk divided by its total duration (V-V units/second), excluding only silent pauses.<br>Articulation rate II (ARTRATE II): defined as the number of V-V units contained in each speech chunk divided by its total duration (V-V units/second), excluding silent pauses and lengthened vowels.<br>Stress group duration (SGDUR): defined as the interval corresponding to two consecutive salient V-V units (in second), i.e., those units for which a duration increase has been automatically detected. Each stress group ends with a salient V-V unit.<br>V-V units duration (VVDUR I): syllable-sized units defined as all the segments uttered between two consecutive vowel onsets (in millisecond). Both salient and non-salient V-V units are included in this parameter.<br>V-V units duration (VVDUR II): the aforementioned phonetic unit corresponding solely to non-salient V-V units (in millisecond), represented by those units for which a duration increase has not been automatically detected.<br>Vowel duration (VOWEL DUR): defined as the duration of produced oral monophthongs (in millisecond).<br>Silent pauses duration (SILPAUSES): silent pauses (in millisecond) equal or superior to 100 ms, a threshold commonly applied in automatic measurements, as to prevent occlusion phases of plosives from being counted.<br>Filled pauses (FILPAUSES): defined as vowel prolongations equal or superior to 100 ms, perceived as hesitations/filled pauses (in millisecond).<br>All pauses (ALLPAUSES): combination of silent and filled pauses (in millisecond), i.e., lengthened vowels before silent pauses or in hesitations.<br>Inter-silent pauses intervals (IPI): defined as the interval comprising the speech production between two consecutive silent pauses (in second).
DOI: 10.6084/m9.figshare.12888542
title: Vowel formant analysis in genetically-related and unrelated speakers in Brazilian Portuguese

description: The present data derives from a Ph.D. research on the inter-speaker discriminatory potential of vowel formant frequencies in comparisons involving genetically-related and non-genetically related speakers.<br>The data comprises of vowel formant values (F1-F4) both in Hertz and Bark (z1-z4).<br>Vowels are classified as front, central, or back; the segments' duration is also included (DUR).
DOI: 10.6084/m9.figshare.12888542.v1
title: Vowel formant analysis in genetically-related and unrelated speakers in Brazilian Portuguese

description: The present data derives from a Ph.D. research on the inter-speaker discriminatory potential of vowel formant frequencies in comparisons involving genetically-related and non-genetically related speakers.<br>The data comprises of vowel formant values (F1-F4) both in Hertz and Bark (z1-z4).<br>Vowels are classified as front, central, or back; the segments' duration is also included (DUR).
DOI: 10.5517/ccdc.csd.cc27x5hv
title: CCDC 2082657: Experimental Crystal Structure Determination

description: Related Article: Yujia Gao, Juan Zhang, Wenyu Shan, Weihong Fei, Jinzhong Yao, Weijun Yao|2021|Org.Lett.|23|6377|doi:10.1021/acs.orglett.1c02197
DOI: 10.5517/ccdc.csd.cc27x5jw
title: CCDC 2082658: Experimental Crystal Structure Determination

description: Related Article: Yujia Gao, Juan Zhang, Wenyu Shan, Weihong Fei, Jinzhong Yao, Weijun Yao|2021|Org.Lett.|23|6377|doi:10.1021/acs.orglett.1c02197
DOI: 10.5517/ccdc.csd.cc24p703
title: CCDC 1986604: Experimental Crystal Structure Determination

description: Related Article: Saikat Gayen, Pameli Ghosh, Hisashi Honda, Debraj Saha, Saptarshi Biswas, Rakesh Debnath, Subratanath Koner|2021|Polyhedron|208|115444|doi:10.1016/j.poly.2021.115444
DOI: 10.5517/ccdc.csd.cc2807q8
title: CCDC 2085609: Experimental Crystal Structure Determination

description: Related Article: Jun-An Xiao, Xiu-Liang Cheng, Hai Peng, Jin-Shao Liang, Xiao-Yan Luo, Wei Su|2021|Chem.Asian J.|16|2435|doi:10.1002/asia.202100591
DOI: 10.5517/ccdc.csd.cc284hkh
title: CCDC 2089696: Experimental Crystal Structure Determination

description: Related Article: Chunyue Shi, Xiaoyan Zhou, Dong Liu, Letong Li, Meiyi Xu, Hiroshi Sakiyama, Mohd Muddassir, Jun Wang|2021|Polyhedron|208|115441|doi:10.1016/j.poly.2021.115441
DOI: 10.5517/ccdc.csd.cc28d7c9
title: CCDC 2097130: Experimental Crystal Structure Determination

description: Related Article: Shengguo Duan, Qiaoyi Xiang, Changchang Deng, Yuchen Jie, Huan Luo, Ze-Feng Xu|2021|Tetrahedron Lett.|80|153329|doi:10.1016/j.tetlet.2021.153329
DOI: 10.5517/ccdc.csd.cc24p714
title: CCDC 1986605: Experimental Crystal Structure Determination

description: Related Article: Saikat Gayen, Pameli Ghosh, Hisashi Honda, Debraj Saha, Saptarshi Biswas, Rakesh Debnath, Subratanath Koner|2021|Polyhedron|208|115444|doi:10.1016/j.poly.2021.115444
DOI: 10.14279/depositonce-12309
title: Response data - Survey on privacy impacts of voice & speech analysis

description: This data shows how 683 participants responded to a survey on their awareness and privacy concerns about the possibilities of modern voice and speech analysis. Details can be found in the corresponding publication: Kröger et al. (2022) "Personal Information Inference from Voice Recordings: User Awareness and Privacy Concerns". In: Proceedings on Privacy Enhancing Technologies (PoPETs).
DOI: 10.5281/zenodo.5428998
title: DrAsync: Identifying and Visualizing Anti-Patterns inAsynchronous JavaScript [Anonymous Experimental Data]

description: ////////////////////////////////////<br> // This directory contains the raw data used to compute aggregate numbers in the paper.<br> There are five files, and 2 subdirectories: (1) apply_run_times: has the raw execution times of various calls to apply throughout vuepress' tests; (2) cpdir_run_times: has the raw execution times of calling cpDir on a large directory as part of the cpDir case study; (3) eleventy_test_executions: contains 50 run times x 2 (before, after refactoring) for eleventy's test suite; (4) promise_resolve_then_case_study: contains execution times for the code fragment from strapi's evaluate function; (5) vuepress_test_executions: contains 50 run times x 2 (before, after refactoring) for vuepress' test suite. For the subdirectories: (1) DynamicAndExecutedAntiPatterns: for each of 20 subject applications x for each of 8 anti-patterns, contains the number<br> of static occurences of anti-patterns which are executed, as well as how often. (2) StaticAntiPatterns: for each of 20 subject applications x for each of 8 anti-patterns, contains the number of static<br> occurrences of the anti-pattern. We further filtered this by discounting anti-patterns appearing<br> in test, generated, build, etc. directories with a separate command. ////////////////////////////////////<br> // CodeQL queries for the anti-patterns are given in supplemental material (available on the submission form). <br> We will make the code for the visualization tool available as part of the artifact submission process if this paper is accepted.