cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/7g7pc633dj
title: Data for: Influence of cryosphere outflow and land cover on stream water quality in Central Asia's glacierized catchments

description: Stream water pH, temperature, electrical conductivity, and nitrate and phosphate concentrations are provided for four catchments (485 – 13 500 km2), all with glaciers and major urban areas in Central Asia. The catchments are: Kaskelen (Kazakhstan), Ala-Archa (Kyrgyzstan), Chirchik (Uzbekistan) and the Kofarnihon (Tajikistan). Measurements were made in stream water, groundwater, reservoir and lake samples over a 22-month period at fortnightly intervals from 35 sites. The water samples were collected at fixed locations along the main channel from 10 – 20 km downstream of the periglacial headwaters to the lowlands, from large tributaries, and from three deep wells, two wells that were artesian, and from three further springs. Sample collection started between April and July 2019 and ended between October 2020 and January 2021 dependent on the country.
In addition, data are provided for cryosphere samples. Snow and glacial melt water samples were collected during the summers of 2019, 2020 and 2021 at the Tuyuksu (KZ) glacier, in 2019 and 2020 at the Golubin (KG) glacier, and at the Barkrak and Tekesh glaciers (UZ) in 2020. The snow samples were collected from snow pits using plastic scoops, placed in plastic bags, melted at room temperature, and filtered and stored as the other water samples. The snow pit sampling was most extensive in KZ where, in 2019, samples were collected from 6 cm layers from the top to the bottom of the snow pit. In 2020, the snow pit was divided into three equal vertical layers of the overall depth of 162 cm and one sample was taken from each layer. In Kyrgyzstan, the cryosphere samples (snow, glacial ice and glacial melt) were collected in 2019 and 2020. In Uzbekistan, 13 samples were collected from the Tekesh and Barkrak glaciers in June and July 2020. In Kazakhstan, at least three water samples were collected in immediate proximity of the Tuyuksu glacier terminus. Water samples were also collected from the outflow of Gorodetskiy and Morennyi rock glaciers and the meltwater from the permafrost active layer in the Ulken and Kishi Almaty headwaters. In total, cryosphere samples were taken at 39 unique locations, and the pH, EC and water temperature were measured in situ except were samples required melting, and NO3--N and PO43--P was measured on return to the laboratory. Not all analytes could be measured in every sample. 
The sampling and analysis methods are described in the publication ‘Influence of cryosphere outflow and land cover on stream water quality in Central Asia's glacierized catchments‘. The R-scripts used to plot the data and run an ANOVA analysis are included.
DOI: 10.6084/m9.figshare.21548007.v1
title: Supplemental data_Excel from Metal-binding proteins and cross-linking in the defensive glue of the slug <i>Arion subfuscus</i>

description: This file contains the original data associated with figures 3 and 4, as well as MS/MS protein identification data.
DOI: 10.6084/m9.figshare.25466308.v1
title: 2024, UVA EV Workshop, EV Flow Cytometry

description: This workshop’s protocols were developed based on the published protocols in: Cook S, Tang VA, Lannigan J, Jones JC, Welsh JA. <b><i>Quantitative flow cytometry enables end-to-end optimization of cross-platform extracellular vesicle studies.</i></b> Cell Rep Methods. 2023 Dec 18;3(12):100664. doi: 10.1016/j.crmeth.2023.100664.
DOI: 10.6084/m9.figshare.7325774.v1
title: PEG_single_chain

description: Molecular Dynamics trajectory of a polyethylenglycol (PEG) chain in TIP3P water. The Amber program and the General Amber Force Field were used. The simulation was performed in the NPT ensemble at 298.15 K. The total simulation time is 10 ns, with a timestep of 2 fs. The trajectory is saved at 200 ps intervals for a total of 50 frames.
DOI: 10.15468/dl.5386j3
title: Occurrence Download

description: A dataset containing 4984 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hymenachne amplexicaulis (Rudge) Nees)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4984 records from 233 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013169-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/fc7xvdymgr
title: The 1D 1H NMR spectra of e-liquids

description: NMR analysis of 25 e-liquid samples from Malaysia. A Folder which contains all data associated with each experiment was generated. The User can open, for each experiment, the Free Induction Decay (fid) or the processed raw spectra (1r).

Files : 
- 1H_NMR_DMSO directory : data collection for the 27 samples analyzed in DMSO-d6 solvent. 
- 1H_NMR_MeOD directory : data collection for the 27 samples analyzed in MeOD solvent. 
- NMR_sample List.xlsx : List of samples and associated experiment numbers by analyzed solvents
DOI: 10.6084/m9.figshare.27201732.v2
title: Raw data of 1. Microscope, 2. Picture visual and 4. cellSens measurements for "Rapid detection and quantification of Nile Red-stained microplastic particles in sediment samples".

description: Raw image data for 1. Microscope, 2. Picture visual and 4. cellSens measurements, and results of cellSens for "Rapid detection and quantification of Nile Red-stained microplastic particles in sediment samples".
DOI: 10.17632/9h34wzkhds
title: Compilation of Malay criminological terms from online news

description: List of words was gathered through the process of word searching related to each crime category. From the seven categories of crime, a total of 724 crime terminologies were collected. Following the conversion of words into Malay, a total of 521 crime words were left,..the dataset pre-processing was applied to the original dataset. By applying an unsupervised method of filtering using StringToWordVector in WEKA, each word in the text was converted into its attribute. This led to an increase in the total number of attributes. The applied stop words then filtered the attributes by matching the same words to the existing attributes. This pre-processing phase helped obtain attributes in the training and test datasets. A list of 500 most relevant attributes in the content of the output was finalized.
DOI: 10.17632/r8x8sf42jy
title: Fry Tracking and Temp Behavior

description: Fry Tracking and Behavior Analysis. 
The segmentation dataset comprised both side-view and top-view images of 20 fry, captured simultaneously by two cameras over 25 and 52 minutes respectively, ensuring comprehensive visual information for model training. To validate real-time tracking accuracy, we developed a separate dataset featuring varying fry densities (20, 30, 40, 50, and 60 fry) in complex scenarios including crossing paths and occlusions.
Our experiment was structured into three 8-hour phases: cooling from 28°C to 20°C, maintaining a constant 20°C, and reheating from 20°C to 28°C. Temperature changes were implemented gradually, altering by 1°C every ten minutes, using a water circulation system with cooling and heating elements to ensure indirect and stable temperature control.
DOI: 10.6084/m9.figshare.19248266.v2
title: Dataset: Functional thresholds alter the relationship of plant resistance and recovery to drought

description: Data and Code from<br> "Ingrisch J, Umlauf N, Bahn M, Functional thresholds alter the relationship of plant resistance and recovery to drought" <br> <br> Data and Code are organised as an R-Project. Code is supplied as .r and .rmd files. In case of .rmd (r-markdown) script output is also supplied as .html.<br> <br> ./Data/Treatment_Info.txt: treatment information to each mesocosm (plot), Plant (Dac = Dactylis, Pla = Plantago), Rep (running number) and Water = target water content (in % of field capacity).<br> ./Data/01_compiled/: contains raw data used for analysis<br> ./Data/02_pro/: contains output from threshold regression analysis used for subsequent analysis<br> ./Data/03_output/: contains model output used in the manuscript<br> <br> ./Figs/ contains figures produced in analysis and used in manuscript<br> <br> ./R-Scripts/<br> /01_ThresholdRegression_ModelCalculation.r: calculates threshold regression models for drought and recovery data and multiple paramters, stores output<br> /02_ThresholdIdentification.rmd: uses model output from 01..., selects best models and creates figure<br> /03_GAMs.r: calculates response surface for productivity measures and bivariate response scheme.<br> 03_LWC-Responses.rmd: produces figure showing response in relation to relative leaf water deficit measured at peak drought.<br> 03_Microclimate.r: creates figure of microclimatic conditions during experiment.<br> <br>
DOI: 10.6084/m9.figshare.22631287.v3
title: a comprehensive database of exosome molecular biomarkers and disease-gene associations

description: Exosomes play a crucial role in intercellular communication and can be used as biomarkers for diagnostic and therapeutic clinical applications. However, systematic studies in cancer-associated exosomal nucleic acids remain a big challenge. Here, we developed ExMdb, a comprehensive database of exosomal nucleic acid biomarkers and disease-gene associations curated from published literature and high-throughput datasets. We performed a comprehensive curation of exosome properties including 4,586 experimentally supported gene-disease associations, 13,768 diagnostic and therapeutic biomarkers, and 312,049 nucleic acid subcellular locations. To characterize expression variation of exosomal molecules and identify causal factors of complex diseases, we have also collected 164 high-throughput datasets, including bulk and single-cell RNA sequencing (scRNA-seq) data. Based on these datasets, we performed various bioinformatics and statistical analyses to support our conclusions and advance our knowledge of exosome biology. Collectively, our dataset will serve as an essential resource for investigating the regulatory mechanisms of complex diseases and improving the development of diagnostic and therapeutic biomarkers.
DOI: 10.6084/m9.figshare.3514364.v1
title: Appendix H. Comparison of linear, quadratic, and piecewise regressions of fecal chlorophyll onto NDVI at the time of fecal collection.

description: Comparison of linear, quadratic, and piecewise regressions of fecal chlorophyll onto NDVI at the time of fecal collection.
DOI: 10.6084/m9.figshare.7898273.v1
title: gVCF_HG03376

description: 1000 Genomes gVCF mapped to hs37d5 for HG03376. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/5dnyrc3pnw
title: Skin, gut, and sand metagenomic data tables on placebo-controlled sandbox biodiversity intervention study

description: The metagenomic data are related to the published research of “A Placebo-controlled double-blinded test of the biodiversity hypothesis of immune-mediated diseases: Environmental microbial diversity elicits changes in cytokines and increase in T regulatory cells in young children” and Data in Brief article "Skin, gut, and sand metagenomic data on placebo-controlled sandbox biodiversity intervention study".
This database contains 16S ribosomal RNA (rRNA) metagenomics of sandbox sand and skin and gut microbiota of children in the intervention and placebo daycares. In intervention daycares, children aged 3–5 years were exposed to playground sand enriched with microbially diverse soil. In placebo daycares, children were exposed to visually similar as in intervention daycares, but microbially poor sand colored with peat. Sand, skin and gut metagenomics were analyzed at baseline and after 14 and 28 days of intervention by high throughput sequencing of bacterial 16S rRNA gene on the Illumina MiSeq platform.
We herein report the richness, diversity, relative abundance (Table 1) and community composition (Table 2) of sand bacteria between enriched intervention and placebo sandbox sand, and bacterial relative abundance shifts on the skin (Table 3) and in the gut between intervention and placebo groups (Table 4 and 5).
DOI: 10.17632/ts2jd8zc9r
title: Premixed Turbulent Combustion of Diesel, GTL, 50% to 50% Blend- Zimont TFC Model

description: These datasets are related to premixed turbulent combustion of diesel, GTL and 50/50 diesel-GTL blend using a cylindrical combustion vessel. Zimont model available in ANSYS Fluent 17.0 was used to conduct the turbulent flame studies on the three fuels at different operating conditions, and to generate the raw data. These data were then extracted from ANSYS Fluent 17.0 and stored in a Microsoft Excel format, and is available on the Mendeley data repository. The Microsoft Excel file contains three sheets; each of them presents the raw data for one of the three fuels. Parameters such as turbulent kinetic energy, turbulent eddy viscosity, turbulent flame speed, Reynolds number and Damkohler number were obtained at the corresponding equivalence ratio and turbulence intensities, and then listed on filtering tables for the ease of accessibility
DOI: 10.17632/xpd3cr89gf
title: LIE, a PC program for Lie analysis of differential equations

description: Abstract LIE is a self-contained PC program for the Lie analysis of ordinary or partial differential equations, either a single equation or a simultaneous set. It generates the Lie determining equations, solves them automatically, splits the solution into Lie vectors and calculates the commutators of the vectors. These steps are deterministic except for solving the Lie equations; this is done by a heuristic procedure. As there must be some cases where a heuristic procedure fails, provision is made for... Title of program: LIE version 4.1 Catalogue Id: ACPB_v1_0 Nature of problem Differential equations are onmipresent in most departments of science. Explicit exact solutions are of great value when they exist and Lie analysis is the only systematic method of finding them. The procedure is well-known [1-5] but involves a large amount of symbolic calculation that is better done by computer. Versions of this program held in the CPC repository in Mendeley Data ACPB_v1_0; LIE version 4.1; 10.1016/0010-4655(93)90007-Y ACPB_v2_0; LIE version 4.5; 10.1016/0010-4655(96)00069-0 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.6084/m9.figshare.13065986.v1
title: Gastric cancer lymph node data set

description: This is a dataset of pathological lymph nodes for gastric cancer. It can be used to test a gastric cancer lymph node metastasis detection model.<br>
DOI: 10.6084/m9.figshare.13218476.v2
title: Ntrk_Inact_Foretinib.log

description: Docking data for NTRK1 (TrkA) wildtype and mutantsType II (inactive conformation of TrkA) docked with foretinib<br>
DOI: 10.6084/m9.figshare.20346852.v1
title: Gait Database

description: Gait recognition is the characterization of unqiue biometric patterns associated with each inidvidual which can be utilized to identify a person without direct contact. A public gain database with relatively large number of subjects can provide a great oppportunity to future studies to build and validate gait authentication models. The goal of this study is to introduce a comprehensive gait database of 93 human subjects who walked between two end points (320 meters) during two different sessions and record their gait data using two smart phones, one was attached to right thigh and another one on left side of waist. This data is collected with intention to be utilized by deep learning-based method which requires enough time points. The meta data including age, gender, smoking, daily exercise time, height, and weight of an individual is recorded. this data set is publicly available. <br> Except 19 subjects who did not attend for second session, every subject is associated with 4 different log files (each session contains two log files). Every file name has one of the following patterns: · sub0-lw-s1.csv: subject number 0, left waist, session 1 · sub0-rp-s1.csv: subject number 0, right thigh, session 1 · sub0-lw-s2.csv: subject number 0, left waist, session 2 · sub0-rp-s2.csv: subject number 0, right thigh, session 2 Every log file contains 58 features that are internally captured and calculated using SensorLog app. Additionally, an Excel file contain the meta data is provided for each subject.
DOI: 10.6084/m9.figshare.23750679.v1
title: Dataset de citações ao repositório Figshare na base Scopus

description: O dataset contém 17.324 registros de documentos científicos (Article, Conference Paper, Data Paper, Review, Book Chapter, Note, Book, Letter, Editorial, Short Survey, Erratum, Retracted), extraídos da base Scopus, com janela temporal entre 2016 a 2023 e que tem em suas referências citação ao repositório Figshare.-----------------The dataset contains 17,324 records of scientific documents (Article, Conference Paper, Data Paper, Review, Book Chapter, Note, Book, Letter, Editorial, Short Survey, Erratum, Retracted) extracted from the Scopus database, covering the period from 2016 to 2023, and referencing the Figshare repository in their citations.-----------------El conjunto de datos contiene 17.324 registros de documentos científicos (Artículo, Ponencia de Conferencia, Data Paper, Revisión, Capítulo de Libro, Nota, Libro, Carta, Editorial, Encuesta Corta, Errata, Retractado), extraídos de la base de datos Scopus, con un período temporal de 2016 a 2023 y que tienen en sus referencias una cita al repositorio Figshare.<br><br>
DOI: 10.6084/m9.figshare.26310718.v1
title: Estimation of effective number of breeders and effective population size in an abundant and heavily exploited marine teleost

description: Caur_6818SNP_732.vcfVCF with 732 snapper samples (401 young of the year, and 331 adult samples) genotyped for 6,818 high-quality SNPs.
DOI: 10.17632/6zg59dvdcd
title: Trends in protected area representation of biodiversity and ecosystem services in five tropical countries

description: GIS data associated with Neugarten RA et al. 2020. Trends in protected area representation of biodiversity and ecosystem services in five tropical countries. Ecosystem Services 42:101078. Includes data from Cambodia, Guyana, Liberia, Madagascar, and Suriname Datasets included: country boundaries, protected areas in 2003 and 2017, biodiversity priority areas, forest cover in 2003 and 2015, forest carbon stocks, non-timber forest products, and freshwater ecosystem services
DOI: 10.6084/m9.figshare.21120982.v1
title: Supplementary Material for "A Biomimetic Fingerprint for Robotic Tactile Sensing"

description: This page contains a dataset, CAD files and demonstration videos. The dataset comprises 156 Kinesthetic explorations of 52 objects performed with the robot hand RH8D. Each exploration comprises background noise and three sensor readings, left, centre and right microphones. Furthermore, the position and current of the motor are saved in an extra data frame. <br> The data set folder structure is as follows: <br> * Data + Object - Background - Kinesthetics ° Rubbing ·Left n.csv ·Center n.csv ·Right n.csv ·rubbing_position_current_n.csv ° Enclosure ·Left n.csv ·Center n.csv ·Right n.csv ·enclosure_position_current_n.csv ° Squeeze ·Left n.csv ·Center n.csv ·Right n.csv ·squeeze_position_current_n.csv - visual ° object_position_n.png <br> <strong>References:</strong> Juiña Quilachamín, O. A., & Navarro-Guerrero, N. (2023). A Biomimetic Fingerprint for Robotic Tactile Sensing. International Symposium on Robotics (ISR Europe), 1–7. <br> <strong>Contact:</strong><br> For information please see the paper. For specific questions regarding the paper please contact Nicolás Navarro-Guerrero.
DOI: 10.15468/dl.dfzxkv
title: Occurrence Download

description: A dataset containing 3369345 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Living Specimen",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3369345 records from 459 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017204-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c36ap9
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.6.4.2_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Coelognathus radiatus (Boie, 1827)"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017211-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qngr7b
title: Occurrence Download

description: A dataset containing 680080 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chloropsis aurifrons (Temminck, 1829), Chloropsis cochinchinensis (Gmelin, 1789), Chloropsis hardwickii Jardine & Selby, 1830, Chloropsis hardwickii Jardine & Selby, 1830, Cinclus cinclus (Linnaeus, 1758), Cinclus pallasii Temminck, 1820, Cisticola exilis (Vigors & Horsfield, 1827), Cisticola juncidis (Rafinesque, 1810), Orthotomus atrogularis Temminck, 1836, Orthotomus sutorius (Pennant, 1769), Prinia atrogularis (Moore, 1854), Prinia crinigera Hodgson, 1836, Prinia flaviventris (Delessert, 1840), Prinia hodgsonii Blyth, 1844, Prinia inornata Sykes, 1832, Prinia rufescens Blyth, 1847, Prinia striata Swinhoe, 1859, Prinia superciliaris (Anderson, 1871), Cissa chinensis (Boddaert, 1783), Cissa hypoleuca Salvadori & Giglioli, 1885)",
 "Geometry POLYGON((73.5208333 16.6625,135.0791667 16.6625,135.0791667 53.5541667,73.5208333 53.5541667,73.5208333 16.6625))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is one of (China, Hong Kong, Macao, Chinese Taipei)"
 ]
}

 The dataset includes 680080 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017196-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15582263
title: VOD_Sentinel-1_ISMN
DOI: 10.5281/zenodo.15582264
title: VOD_Sentinel-1_ISMN
DOI: 10.15468/dl.qqjq9a
title: Occurrence Download

description: A dataset containing 36448 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Streptomyces Waksman & Henrici, 1943"
 ]
}

 The dataset includes 36448 records from 425 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017213-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.grrmj9
title: Occurrence Download

description: A dataset containing 13768782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 13768782 records from 1278 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017210-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aqv3gt
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is South Africa",
 "OccurrenceStatus is Present",
 "TaxonKey is Caprimulgus pectoralis"
 ]
}

 The dataset includes 171 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011865-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.