cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.s75p458
title: Data from: Seeing-good-gene-based mate choice: from genes to behavioural preferences

description: 1. Although vertebrates have been reported to gain higher reproductive
 outputs by choosing mates, few studies have been conducted on threatened
 species. However, species recovery should benefit if natural mate choice
 could improve reproductive output (i.e., pair performance related to
 offspring number, such as increased clutch size, numbers of fertilized egg
 and fledglings). We assessed the evidence for major histocompatibility
 complex (MHC)-based mate preference in the endangered crested ibis
 (Nipponia nippon), and quantified the impacts of such choice on
 reproductive output. 2. We tested the hypothesis that crested ibis
 advertise “good genes” through external traits, by testing whether nuptial
 plumage characteristics and body morphology mediate mate choice for
 underlying genetic MHC variation. 3. We found differences between males
 and females in preferred MHC genotypes, external traits used in mate
 choice, and contributions to reproductive outputs. Females preferred
 MHC-heterozygous males, which had darker [i.e., lower total reflectance
 and ultraviolet (UV) reflectance] nuptial plumage. Males preferred females
 lacking the DABd allele at the MHC classⅡDAB locus, which had higher
 average body mass. DABd-free females yielded heavier eggs and more
 fledglings, while MHC-heterozygous males contributed to more fertilized
 eggs and fledglings. Fledging rate was highest when both parents had the
 preferred MHC genotypes (i.e., MHC-heterozygous father and DABd-free
 mother). Comparisons showed that free-mating wild and seminatural pairs
 yielded more fertilized eggs and more fledglings, with a higher fledging
 rate, than captive pairs matched artificially based on pedigree. 4.
 Conservation programs seldom apply modern research results to population
 management, which could hinder recovery of threatened species. Our results
 show that mate choice can play an important role in improving reproductive
 output, with an example in which an endangered bird selects mates using UV
 visual capability. Despite the undoubted importance of pedigree-based
 matching of mates in conservation programs, we show that free-mating can
 be a better alternative strategy.
description: data
DOI: 10.5061/dryad.9rq4743
title: Data from: To burn or not to burn: comparing re-introducing fire with cutting an encroaching conifer for conservation of an imperiled shrub-steppe

description: Woody vegetation has increased on rangelands worldwide for the past
 100-200 years, often because of reduced fire frequency. However, there is
 a general aversion to re-introducing fire and therefore, fire-surrogates
 are often used in its place to reverse woody plant encroachment.
 Determining the conservation effectiveness of re-introducing fire compared
 to fire-surrogates over different time scales is needed to improve
 conservation efforts. We evaluated the conservation effectiveness of
 re-introducing fire with a fire-surrogate (cutting) applied over the last
 ~30 years to control juniper (Juniperus occidentalis Hook.) encroachment
 on 77 sagebrush-steppe sites. Critical to conservation of this imperiled
 ecosystem is to limit juniper, not encourage exotic annual grasses, and
 promote sagebrush dominance of the overstory. Re-introducing fire was more
 effective than cutting at reducing juniper abundance and extending the
 period of time that juniper was not dominating the plant community.
 Sagebrush was reduced more with burning than cutting. Sagebrush, however,
 was predicted to be a substantial component of the overstory longer in
 burned than cut areas because of more effective juniper control. Variation
 in exotic annual grass cover was explained by environmental variables and
 perennial grass abundance, but not treatment, with annual grasses being
 problematic on hotter and drier sites with less perennial grass. This
 suggests that ecological memory varies along an environmental gradient.
 Re-introducing fire was more effective than cutting at conserving
 sagebrush-steppe encroached by juniper over extended time-frames; however,
 cutting was more effective for short-term conservation. This suggests fire
 and fire-surrogates both have critical roles in conservation of imperiled
 ecosystems.
description: juniper treatment
 dataSite and vegetation
 characteristics in areas cut or burned to control western
 juniperupload master
 consolidated_master.xlsx
DOI: 10.5061/dryad.360v97q
title: Data from: A mother’s legacy: the strength of maternal effects in animal populations

description: Although mothers influence the traits of their offspring in many ways
 beyond the transmission of genes, it remains unclear how important such
 “maternal effects” are to phenotypic differences among individuals.
 Synthesizing estimates derived from detailed pedigrees, we evaluated the
 amount of phenotypic variation determined by maternal effects in animal
 populations. Maternal effects account for half as much phenotypic
 variation within populations as do additive genetic effects. Maternal
 effects most greatly affect morphology and phenology but, surprisingly,
 are not stronger in species with prolonged maternal care than in species
 without. While maternal effects influence juvenile traits more than adult
 traits on average, they do not decline across ontogeny for behavior or
 physiology, and they do not weaken across the life cycle in species
 without maternal care. These findings underscore maternal effects as an
 important source of phenotypic variation and emphasize their potential to
 affect many ecological and evolutionary processes.
description: m2.main.csvEstimates of m2 and h2 used in the analyses described in the main textm2.form.csvEstimates of m2 and h2 used in the formal meta-analyses described in the Supporting Informationm2.all.est.csvEstimates of m2 including cases where the study reported finding that maternal effects were non-significant. Analyses reported in Supporting Information.m2.sex.csvSubset of the larger dataset, here including just those estimates of m2 and h2 for traits measured in males and females. This subset of the data is included with code (“example code for offspring sex analyses.txt”) demonstrating how each kind of analysis was conducted.example code for offspring sex analysesAnnotated R code with examples of each kind of analysis. Uses differences between males and females.
DOI: 10.5061/dryad.5b2m501
title: Data from: Chromosome-level reference genome of X12, a highly virulent race of the soybean cyst nematode Heterodera glycines

description: Soybean cyst nematode (SCN, Heterodera glycines) is a major pest of
 soybean that is spreading across major soybean production regions
 worldwide. Increased SCN virulence has recently been observed in both the
 United States and China. However, no study has reported a genome assembly
 for H. glycines at the chromosome scale. Herein, the first
 chromosome-level reference genome of X12, an unusual SCN race with high
 infection ability, is presented. Using whole-genome shotgun (WGS)
 sequencing, PacBio sequencing, Illumina paired-end sequencing, 10X
 Genomics linked reads and high-throughput chromatin conformation capture
 (Hi-C) genome scaffolding techniques, a 141.01-Mb assembled genome was
 obtained with scaffold and contig N50 sizes of 16.27 Mb and 330.54 kb,
 respectively. The assembly showed high integrity and quality, with over
 90% of Illumina reads mapped to the genome. The assembly quality was
 evaluated using Core Eukaryotic Genes Mapping Approach (CEGMA) and
 Benchmarking Universal Single-Copy Orthologs (BUSCO). A total of 11,882
 genes were predicted using De novo, Homolog and RNAseq data generated from
 eggs, second-stage juveniles (J2), third-stage juveniles (J3) and
 fourth-stage juveniles (J4) of X12, and 79.0% of homologous sequences were
 annotated in the genome. These high-quality X12 genome data will provide
 valuable resources for research in a broad range of areas, including
 fundamental nematode biology, SCN-plant interactions and coevolution, and
 also contribute to the development of technology for overall SCN
 management.
description: SCN_genome.fa.tar.gzThe genome file of Heterodera glycines.repeat_annotation.gff.tar.gzThe repeats annotation file of Heterodera glycines.ncRNA.gff3.tar.gzThe ncRNA annotation file of Heterodera glycines.pasa2.longest.filter.gff3.tar.gzthe gff3 file of Heterodera glycines.pasa2.longest.filter.cds.tar.gzThe CDS sequence file of Heterodera glycines.pasa2.longest.filter.pep.tar.gzThe protein sequence file of Heterodera glycines.
DOI: 10.57745/j6tmxx
title: Data of exposure experiment in Vietnam--1. C, N, 13C-Chao's SBB paper.tab

description: Données sur le distribution du carbone organique des turricules dans des pools POM et MAOM
DOI: 10.57745/jqbvgv
title: Data for paper Song et al. (2024), SBB

description: il s'agit des données concernent le vieillissement des turricules d'un vers de terre tropical pendant 400 jours sur le terrain dans le Dong Cao watershed au Vietnam
DOI: 10.15468/dl.ncksnc
title: Occurrence Download

description: A dataset containing 40387368 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Branta canadensis moffitti, Branta hutchinsii, Branta hutchinsii minima, Branta leucopsis, Branta sandvicensis, Bucephala albeola, Bucephala islandica, Cairina moschata, Callonetta leucophrys, Cereopsis novaehollandiae, Chenonetta jubata, Chloephaga melanoptera, Chloephaga poliocephala, Chloephaga rubidiceps, Coscoroba coscoroba, Cyanochen cyanoptera, Cygnus atratus, Cygnus buccinator, Cygnus columbianus, Cygnus cygnus, Cygnus melancoryphus, Cygnus olor, Dendrocygna arborea, Dendrocygna arcuata, Dendrocygna autumnalis, Dendrocygna bicolor, Dendrocygna eytoni, Dendrocygna viduata, Heteronetta atricapilla, Lophodytes cucullatus, Lophonetta specularioides, Malacorhynchus membranaceus, Mareca americana, Mareca falcata, Mareca penelope, Mareca sibilatrix, Marmaronetta angustirostris, Melanitta perspicillata, Mergus merganser)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 40387368 records from 3316 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001615-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57ty7q
title: Occurrence Download

description: A dataset containing 36448 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Streptomyces Waksman & Henrici, 1943"
 ]
}

 The dataset includes 36448 records from 425 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016057-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dn8nmw
title: Occurrence Download

description: A dataset containing 12564 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Carex lurida"
 ]
}

 The dataset includes 12564 records from 161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049474-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4kx98
title: Occurrence Download

description: A dataset containing 15611 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leptonycteris nivalis, Leptonycteris yerbabuenae, Choeronycteris mexicana, Antrozous pallidus)",
 "Country is one of (Mexico, United States of America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15611 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049478-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/ahfayq
title: Replication Data for: "Pragmatic and Political Determinants of Chinese Assistance"

description: Dataset used in analysis for project titled: Pragmatic and Political Determinants of Chinese Assistance.
DOI: 10.15468/dl.s5p3mv
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is BRA.10.215_2",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 166 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009771-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17630/963932fc-cc3e-4b69-b92d-58108e138657
title: Shedding Light on DNA-Protein Interactions involved in the Nucleotide Excision Repair pathway - Chapter III - SSBs (thesis data)

description: Data which allowed for the creation of the figures of the chapter III of the thesis. 
Abstract: S
Ingle-strand DNA is prone to damage as well as re-complementation. Organisms have evolved ways to protect single-strand DNA and prevent double-strand DNA to reform using proteins which specifically bind to single-strand DNA/RNA sequences. Generally, one ubiquitous protein exists in a given organism, in Humans, this protein is replication protein A or RPA. The minimal single strand DNA binding domain, oligonucleotide/oligosaccharide binding domain or OB domain or OB fold is conserved throughout evolution, human RPA contains 5 OB domains.
In contrast, archaeal SSBs are usually monomeric and contain a single OB fold. The DNA interaction of SSB from Sulfolobus Solfataricus (SsoSSB) has been previously investigated in our group. In this chapter, we will expand our understanding of two archaeal SSBs: the previously mentioned SSoSSB and Sulfolobus acidocaldarius (SacSSB). We carried out a comparative analysis of their binding properties as a function of ionic strength, temperature and pH. The ability of both proteins to interact with ssDNA (or ssRNA) at extreme conditions make them an interesting tool for some biological applications. In an attempt to modulate the DNA-binding properties of SSBs, we have designed and characterized a chimeric SSB that fuses two OB-folds from solfataricus and acidocaldarius. We showed that this chimeric form improves the binding in every condition tested compared to both single OB fold proteins.
Indefinite embargo applied. Embargo reason: permission not provided to allow public access
DOI: 10.5281/zenodo.14836854
title: Source Code and movie files for "Characteristic features of an active polar filament pushing a load"

description: This repository consists of source code and movie files related to the "Characteristic features of an active polar filament pushing a load"
DOI: 10.5281/zenodo.14887033
title: Source Code and movie files for "Characteristic features of an active polar filament pushing a load"

description: This repository consists of source code and movie files related to the "Characteristic features of an active polar filament pushing a load"
DOI: 10.5281/zenodo.14899627
title: Source Code and movie files for "Characteristic features of an active polar filament pushing a load"

description: This repository consists of source code and movie files related to the "Characteristic features of an active polar filament pushing a load"
DOI: 10.5281/zenodo.14899826
title: Source Code and movie files for "Characteristic features of an active polar filament pushing a load"

description: This repository consists of source code and movie files related to the "Characteristic features of an active polar filament pushing a load"
DOI: 10.5281/zenodo.14836853
title: Source Code and movie files for "Characteristic features of an active polar filament pushing a load"

description: This repository consists of source code, data, analysis code and movie files related to the "Characteristic features of an active polar filament pushing a load"
DOI: 10.5281/zenodo.15282161
title: Source Code and movie files for "Characteristic features of an active polar filament pushing a load"

description: This repository consists of source code, data, analysis code and movie files related to the "Characteristic features of an active polar filament pushing a load"
DOI: 10.5517/ccdc.csd.cc2p4zhb
title: CCDC 2477442: Experimental Crystal Structure Determination

description: Related Article: Erich Turgunbajew, Matthias Hämmer, Lkhamsuren Bayarjargal, Florian Pielnhofer, Henning A. Höppe|2025|Chem.-Eur.J.|31|e02439|doi:10.1002/chem.202502439
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13130/rd_unimi/uoloji/pgfngo
title: Giugno_1936_Pagina_042.jpg

description: Bulletin of 1936/06/11
DOI: 10.3535/7n1-4cb-djf
title: Geranium sylvaticum L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/nwn-2sp-a01
title: Alchemilla samuelssonii Rothm. ex S. E. Fröhner

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/pzt-4g7-pzb
title: Geranium sylvaticum L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.5517/ccdc.csd.cc2p4xvm
title: CCDC 2477391: Experimental Crystal Structure Determination

description: Related Article: Erich Turgunbajew, Matthias Hämmer, Lkhamsuren Bayarjargal, Florian Pielnhofer, Henning A. Höppe|2025|Chem.-Eur.J.|31|e02439|doi:10.1002/chem.202502439
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2p6qvh
title: CCDC 2479127: Experimental Crystal Structure Determination

description: Related Article: Ersad Hossain, Sayantan Sil, Srikanta Malik, Joydeb Goura, Moumita Chatterjee, Partha Pratim Ray, Mohammad Hedayetullah Mir, Subrata Mukhopadhyay|2025|CrystEngComm|27|7531|doi:10.1039/d5ce00789e
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13130/rd_unimi/uoloji/jxdllj
title: Giugno_1936_Pagina_043.jpg

description: Bulletin of 1936/06/11
DOI: 10.13130/rd_unimi/uoloji/rrjz8v
title: Giugno_1936_Pagina_044.jpg

description: Bulletin of 1936/06/11
DOI: 10.21227/7qrp-as12
title: "A Specification-Aware Optimization Framework for Continuous-Time Linear Equalizers in High-Speed SerDes Systems"

description: "Abstract\u2014This paper presents a designer-driven optimization framework for Continuous-Time Linear Equalizers (CTLEs) used in high-speed SerDes systems. The proposed Python-based model integrates parameter sweeping, transfer function analysis, and curve fitting to align circuit behavior with specification targets. By automating the sizing process while preserving transparency and control, the framework accelerates schematic-level design and supports multi-standard compatibility. Additionally, the model incorporates AI-assisted hierarchical modeling and hybrid optimization strategies, enabling rapid generation of surrogate models and reducing simulation overhead. Simulation results demonstrate strong correlation with HSPICE outcomes, validating the model\u2019s effectiveness for early-stage analog design."
DOI: 10.3535/qh6-m32-bac
title: Carex canescens L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wsq-6kf-z8h
title: Carex holostoma Drejer

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.13130/rd_unimi/uoloji/eb5lvz
title: Giugno_1936_Pagina_045.jpg

description: Bulletin of 1936/06/12
DOI: 10.15468/dl.4xqdz3
title: Occurrence Download

description: A dataset containing 21291 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eichhornia crassipes"
 ]
}

 The dataset includes 21291 records from 651 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009794-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/2ar-h7k-lss
title: Geranium sylvaticum L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/5fv-d4k-c5g
title: Moehringia trinervia (L.) Clairv.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/7y3-lxv-8s8
title: Sedum annuum L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/fre-gpb-rmp
title: Eleocharis mamillata (H.Lindb.) H.Lindb.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.13130/rd_unimi/uoloji/b74cvx
title: Giugno_1936_Pagina_046.jpg

description: Bulletin of 1936/06/12
DOI: 10.3535/gsx-2sm-x7f
title: Carex lapponica O.Lang

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/v36-xw9-6s0
title: Arabis hirsuta (L.) Scop.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wfl-9sc-6s4
title: Eleocharis palustris var. subsp. palustris var. lindbergii

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.13130/rd_unimi/uoloji/a04evg
title: Giugno_1936_Pagina_048.jpg

description: Bulletin of 1936/06/12
DOI: 10.13130/rd_unimi/uoloji/avecks
title: Giugno_1936_Pagina_047.jpg

description: Bulletin of 1936/06/12
DOI: 10.3535/2t8-q84-nlk
title: Juncus alpinoarticulatus subsp. fischerianus (Turcz. ex V. I. Krecz.) Hämet-Ahti

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/3g9-c4f-8gj
title: Alchemilla monticola Opiz

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/y1k-mqd-vnj
title: Equisetum arvense L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.13130/rd_unimi/uoloji/3oenf9
title: Giugno_1936_Pagina_049.jpg

description: Bulletin of 1936/06/13
DOI: 10.3535/a0t-lcs-1mg
title: Silene noctiflora L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/glz-mk0-hql
title: Gymnadenia conopsea var. subsp. conopsea var. conopsea

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.13130/rd_unimi/uoloji/fqvmny
title: Giugno_1936_Pagina_050.jpg

description: Bulletin of 1936/06/13
DOI: 10.3535/3y9-927-dpa
title: Equisetum arvense L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/4w4-fb0-tzn
title: Silene noctiflora L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/rp3-7fd-6zq
title: Puccinellia capillaris (Lilj.) Jansen

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.