cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3734164_d1
title: Additional file 1: Table S1. of Picky eaters are rare: DNA-based blood meal analysis of Culicoides (Diptera: Ceratopogonidae) species from the United States

description: Summary of data for blood-engorged Culicoides species collected in North America. Provided are the collection locality information (State, county, latitude and longitude), year collected (year), Culicoides species, sample size at each locality (n), and identification of host using DNA-based blood meal analysis (Host ID). The host species are: black-tailed deer (Odocoileus hemionus); black-tailed jackrabbit (Lepus californicus); cattle (Bos taurus); domestic dog (Canis familiaris); domestic goat (Capra hircus); domestic sheep (Ovis aries); donkey (Equus asinus); horse (Equus. caballus); swine (Sus scofa); white-tailed deer (O. virginianus); emu (Dromaius novaehollandiae); house finch (Haemorhous mexicanus). We also included the cluster in the neighbor-joining tree that contained haplotypes from individuals at each location. If we could not obtain genetic information from individuals at that location this was also included. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.c.3734164_d1.v1
title: Additional file 1: Table S1. of Picky eaters are rare: DNA-based blood meal analysis of Culicoides (Diptera: Ceratopogonidae) species from the United States

description: Summary of data for blood-engorged Culicoides species collected in North America. Provided are the collection locality information (State, county, latitude and longitude), year collected (year), Culicoides species, sample size at each locality (n), and identification of host using DNA-based blood meal analysis (Host ID). The host species are: black-tailed deer (Odocoileus hemionus); black-tailed jackrabbit (Lepus californicus); cattle (Bos taurus); domestic dog (Canis familiaris); domestic goat (Capra hircus); domestic sheep (Ovis aries); donkey (Equus asinus); horse (Equus. caballus); swine (Sus scofa); white-tailed deer (O. virginianus); emu (Dromaius novaehollandiae); house finch (Haemorhous mexicanus). We also included the cluster in the neighbor-joining tree that contained haplotypes from individuals at each location. If we could not obtain genetic information from individuals at that location this was also included. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.c.3734155_d3.v1
title: Additional file 3: of Discrimination of three genetically close Aspergillus species by using high resolution melting analysis applied to indoor air as case study

description: Spike test results (XLSX 12Â kb)
DOI: 10.15468/dl.sv2wk6
title: Occurrence Download

description: A dataset containing 568 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nuphar ×spenneriana Gaudin"
 ]
}

 The dataset includes 568 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038867-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3734158_d2.v1
title: MOESM2 of 
                     Pichia pastoris versus Saccharomyces cerevisiae: a case study on the recombinant production of human granulocyte-macrophage colony-stimulating factor

description: Additional file 2. Results of bioactivity analysis of purified hGM-CSF derived from P. pastoris X33::hgmcsf and S. cerevisiae BY4742/pYES2-hgmcsf.
DOI: 10.6084/m9.figshare.c.3734155_d3
title: Additional file 3: of Discrimination of three genetically close Aspergillus species by using high resolution melting analysis applied to indoor air as case study

description: Spike test results (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3734155_d4.v1
title: Additional file 4: of Discrimination of three genetically close Aspergillus species by using high resolution melting analysis applied to indoor air as case study

description: Alignment of the 9 Versicolores species and the Aversi_ITS primers (XLSX 3495Â kb)
DOI: 10.6084/m9.figshare.c.3734158_d2
title: MOESM2 of 
                     Pichia pastoris versus Saccharomyces cerevisiae: a case study on the recombinant production of human granulocyte-macrophage colony-stimulating factor

description: Additional file 2. Results of bioactivity analysis of purified hGM-CSF derived from P. pastoris X33::hgmcsf and S. cerevisiae BY4742/pYES2-hgmcsf.
DOI: 10.5522/04/27316854
title: Makris et al. - scRNAseq data - Podoplanin deletion in lymph node fibroblastic stroma

description: These data provide single cell transcriptomic sequences for fibroblastic stromal cells (CD45-CD31-) and immune cells (CD45+CD31+) isolated from murine skin-draining lymph nodes. We have compared Wild type C57BL/6J mice with a genetically modified <i>Pdgfra</i><sup>mGFP-CreERT2 </sup>x <i>Pdpn</i><sup>flox/flox</sup> to induce deletion of the gene encoding Podoplanin conditionally from fibroblasts.These data support the publication - https://doi.org/10.1101/2022.12.01.518753<br><b>Files included:</b>Raw data h5 files, 10X Genomics transcriptional sequencing<br>Control_CD45-CD31-,PDPNdel_CD45-CD31-,Control_CD45+CD31+PDPNdel_CD45+CD31+
DOI: 10.5522/04/27316854.v1
title: Makris et al. - scRNAseq data - Podoplanin deletion in lymph node fibroblastic stroma

description: These data provide single cell transcriptomic sequences for fibroblastic stromal cells (CD45-CD31-) and immune cells (CD45+CD31+) isolated from murine skin-draining lymph nodes. We have compared Wild type C57BL/6J mice with a genetically modified <i>Pdgfra</i><sup>mGFP-CreERT2 </sup>x <i>Pdpn</i><sup>flox/flox</sup> to induce deletion of the gene encoding Podoplanin conditionally from fibroblasts.These data support the publication - https://doi.org/10.1101/2022.12.01.518753<br><b>Files included:</b>Raw data h5 files, 10X Genomics transcriptional sequencing<br>Control_CD45-CD31-,PDPNdel_CD45-CD31-,Control_CD45+CD31+PDPNdel_CD45+CD31+
DOI: 10.6084/m9.figshare.c.3734155_d4
title: Additional file 4: of Discrimination of three genetically close Aspergillus species by using high resolution melting analysis applied to indoor air as case study

description: Alignment of the 9 Versicolores species and the Aversi_ITS primers (XLSX 3495Â kb)
DOI: 10.6084/m9.figshare.c.3734155_d5.v1
title: Additional file 5: of Discrimination of three genetically close Aspergillus species by using high resolution melting analysis applied to indoor air as case study

description: Melting temperature obtained for the species from the Versicolores group (XLSX 11Â kb)
DOI: 10.15468/dl.tg4avx
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argyropelecus lychnus Garman, 1899",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 49 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038868-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3735442_d4.v1
title: Additional file 4: Table S3. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Analysis of G test. G test of independence (P, FDR_P and Bonferroni_P) across Polyrhachis samples to determine whether OTU presence/absence is associated with different host categories. (XLSX 18Â kb)
DOI: 10.57754/fdat.gh6de-akg83
title: Gedichtkorpus Dickinson IV

description: The poem "My life has stood a loaded gun" by Emily Dickinson serves as the corpus for an analysis of the difficulties of ambiguity that are assumed to be built in on purpose in this poem and of the linguistic analysis to determine plausible interpretations of the poem.
description: Research carried out in work package A02 of the SFB 833.
DOI: 10.6084/m9.figshare.c.3735442_d4
title: Additional file 4: Table S3. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Analysis of G test. G test of independence (P, FDR_P and Bonferroni_P) across Polyrhachis samples to determine whether OTU presence/absence is associated with different host categories. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3735457_d2.v1
title: Additional file 11: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: TSS genes Myotubes (Day 3) Myoblasts. (XLSX 83 kb)
DOI: 10.6084/m9.figshare.c.3735451_d3.v1
title: Additional file 3: of Consolidating emerging evidence surrounding HIVST and HIVSS: a rapid systematic mapping protocol

description: Data extraction template. Template to be used to extract data and upload to map. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3735457_d2
title: Additional file 11: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: TSS genes Myotubes (Day 3) Myoblasts. (XLSX 83 kb)
DOI: 10.6084/m9.figshare.c.3735457_d3.v1
title: Additional file 12: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: Gene ontology lists for genes by feature enrichment. (XLSX 59 kb)
DOI: 10.6084/m9.figshare.c.3735451_d3
title: Additional file 3: of Consolidating emerging evidence surrounding HIVST and HIVSS: a rapid systematic mapping protocol

description: Data extraction template. Template to be used to extract data and upload to map. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3735442_d5.v1
title: Additional file 5: Table S4. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Alpha diversity estimation. Chao1, PD whole tree, Observed OTUs, Simpson and Shannon observed in Polyrhachis individuals. (XLSX 21Â kb)
DOI: 10.6084/m9.figshare.c.3735457_d3
title: Additional file 12: of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: Gene ontology lists for genes by feature enrichment. (XLSX 59 kb)
DOI: 10.6084/m9.figshare.c.3735442_d5
title: Additional file 5: Table S4. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Alpha diversity estimation. Chao1, PD whole tree, Observed OTUs, Simpson and Shannon observed in Polyrhachis individuals. (XLSX 21Â kb)
DOI: 10.6084/m9.figshare.c.3735457_d4.v1
title: Additional file 13:ďťż of Linkages between changes in the 3D organization of the genome and transcription during myotube differentiation in vitro

description: Feature enrichment for undetected genes. (XLSX 436 kb)
DOI: 10.6084/m9.figshare.c.3737710_d10
title: Additional file 7: Table S3. of Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

description: The percentages of promoter regions overlapping with CpG islands. (XLS 36Â kb)
DOI: 10.6084/m9.figshare.c.3737764_d3
title: Additional file 3: Figure S2. of Sex-specific differences in transcriptome profiles of brain and muscle tissue of the tropical gar

description: Results from differential expression analysis of female and male muscle tissue. A) MA plot for each transcript comparing the log2 fold-change versus the average transcript expression. Each dot represents a transcript and the significantly differentially expressed (FDR
DOI: 10.6084/m9.figshare.c.3737764_d3.v1
title: Additional file 3: Figure S2. of Sex-specific differences in transcriptome profiles of brain and muscle tissue of the tropical gar

description: Results from differential expression analysis of female and male muscle tissue. A) MA plot for each transcript comparing the log2 fold-change versus the average transcript expression. Each dot represents a transcript and the significantly differentially expressed (FDR
DOI: 10.6084/m9.figshare.c.3737710_d12
title: Additional file 9: Table S4. of Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

description: Exclusivity of C-rich and G-rich motifs at the immediately upstream regions of TSS of pancRNA-partnered genes. (XLS 27Â kb)
DOI: 10.6084/m9.figshare.c.3737710_d12.v1
title: Additional file 9: Table S4. of Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

description: Exclusivity of C-rich and G-rich motifs at the immediately upstream regions of TSS of pancRNA-partnered genes. (XLS 27Â kb)
DOI: 10.6084/m9.figshare.c.3737785_d1.v1
title: MOESM1 of Bacterial flora of combat wounds from eastern Ukraine and time-specified changes of bacterial recovery during treatment in Ukrainian military hospital

description: Additional file 1: Table S1. Antibiotic susceptibility profiles of Gram-negative bacteria isolated from wounds.
DOI: 10.6084/m9.figshare.c.3737785_d1
title: MOESM1 of Bacterial flora of combat wounds from eastern Ukraine and time-specified changes of bacterial recovery during treatment in Ukrainian military hospital

description: Additional file 1: Table S1. Antibiotic susceptibility profiles of Gram-negative bacteria isolated from wounds.
DOI: 10.5522/04/28044641
title: X-CT volume of a mineral inclusion within diamond Ju5-119 (4x objective)

description: Micron-scale X-CT of a mineral inclusion within a diamond. Comprised of breyite (CaSiO3) and perovskite (CaTiO3). Measurements were conducted at the I13 beamline of Diamond Light Source. 1800 projections were collected over a 180 degree rotation on a pco.edge 5.5 sCMOS Camera using a 4x objective lens (0.05 second exposures; 0.81 μm voxels).Diamond Ju5-119, from the Juina-5 kimberlite pipe, Brazil.
DOI: 10.5522/04/28044641.v1
title: X-CT volume of a mineral inclusion within diamond Ju5-119 (4x objective)

description: Micron-scale X-CT of a mineral inclusion within a diamond. Comprised of breyite (CaSiO3) and perovskite (CaTiO3). Measurements were conducted at the I13 beamline of Diamond Light Source. 1800 projections were collected over a 180 degree rotation on a pco.edge 5.5 sCMOS Camera using a 4x objective lens (0.05 second exposures; 0.81 μm voxels).Diamond Ju5-119, from the Juina-5 kimberlite pipe, Brazil.
DOI: 10.15468/dl.6fr9yd
title: Occurrence Download

description: A dataset listing the 5 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (EX, EW, CR, EN, VU, NT, LC, DD, NE)",
 "Locality is Mok-dong",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 5 records were derived from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038854-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3tr7kd
title: Occurrence Download

description: A dataset containing 2665 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scutellaria columnae All., Scutellaria altissima A.Ham., 1832)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 2665 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038869-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3737981_d1.v1
title: Additional file 1: of Prediction accuracy of intraocular lens power calculation methods after laser refractive surgery

description: Results of measurements and prediction errors for each case. This file shows all necessary data that was used for calculation in this article. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3737981_d1
title: Additional file 1: of Prediction accuracy of intraocular lens power calculation methods after laser refractive surgery

description: Results of measurements and prediction errors for each case. This file shows all necessary data that was used for calculation in this article. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3737978_d2.v1
title: Additional file 2: Table S1. of A comprehensive hybridization model allows whole HERV transcriptome profiling using high density microarray

description: Chromosome locations of the prototypes used in HERVgDB4 generation. For each of the 70 prototypes associated with 42 HERV families, the family name, the sub-region annotation (full length provirus, int = gag + pol + env, LTRs, U3, R, U5 subdomains, and gag, pol, dUTPase, env genes), chromosome location (chromosome, start, end) and strand are provided. The 42 HERV families split into, 28 class I, 11 class II and 3 class III sub-families. (XLS 76 kb)
DOI: 10.57754/fdat.yce3s-akr92
title: Gedichtkorpus Dickinson III

description: Based on the poems "To pile like thunder", "This was a poet", and "He fumbles at your soul" this corpus of Emily Dickinson poems is the basis for an analysis of the relation of notions of meaning in literary studies to the notion of meaning in formal semantics. Applying the tools from intensional semantics to the problem of finding meanings of fictional texts leads us to observe a new kind of intensional environment.
description: Research carried out in work package A02 of the SFB 833.
DOI: 10.6084/m9.figshare.c.3737978_d2
title: Additional file 2: Table S1. of A comprehensive hybridization model allows whole HERV transcriptome profiling using high density microarray

description: Chromosome locations of the prototypes used in HERVgDB4 generation. For each of the 70 prototypes associated with 42 HERV families, the family name, the sub-region annotation (full length provirus, int = gag + pol + env, LTRs, U3, R, U5 subdomains, and gag, pol, dUTPase, env genes), chromosome location (chromosome, start, end) and strand are provided. The 42 HERV families split into, 28 class I, 11 class II and 3 class III sub-families. (XLS 76 kb)
DOI: 10.6084/m9.figshare.c.3739934_d3.v1
title: MOESM3 of Toxicity of nano- and ionic silver to embryonic stem cells: a comparative toxicogenomic study

description: Additional file 3: Table S1. List of 101 DEGs regulated by AgNPs. Gene expression profiles of AgNP-exposed samples were compared with the controls using one-way analysis of variance (ANOVA) based on the Welch t-test, and DEGs were selected by |FC| ≥ 1.5 and p ≤ 0.05.
DOI: 10.6084/m9.figshare.c.3739943_d1.v1
title: Additional file 1: of Assessments of serum copper and zinc concentration, and the Cu/Zn ratio determination in patients with multidrug resistant pulmonary tuberculosis (MDR-TB) in Côte d’Ivoire

description: Analysis results. Results of copper, zinc and the Zn / Cu ratio of MDR-TB and controls with enrollment centers (ATC), sex, and follow-up stage for TBMR. (XLSX 30 kb)
DOI: 10.6084/m9.figshare.c.3739934_d3
title: MOESM3 of Toxicity of nano- and ionic silver to embryonic stem cells: a comparative toxicogenomic study

description: Additional file 3: Table S1. List of 101 DEGs regulated by AgNPs. Gene expression profiles of AgNP-exposed samples were compared with the controls using one-way analysis of variance (ANOVA) based on the Welch t-test, and DEGs were selected by |FC| ≥ 1.5 and p ≤ 0.05.
DOI: 10.6084/m9.figshare.c.3739943_d1
title: Additional file 1: of Assessments of serum copper and zinc concentration, and the Cu/Zn ratio determination in patients with multidrug resistant pulmonary tuberculosis (MDR-TB) in Côte d’Ivoire

description: Analysis results. Results of copper, zinc and the Zn / Cu ratio of MDR-TB and controls with enrollment centers (ATC), sex, and follow-up stage for TBMR. (XLSX 30 kb)
DOI: 10.6084/m9.figshare.c.3739934_d4.v1
title: MOESM4 of Toxicity of nano- and ionic silver to embryonic stem cells: a comparative toxicogenomic study

description: Additional file 4: Table S2. List of 400 DEGs regulated by Ag+. Gene expression profiles of Ag+-exposed samples were compared with the controls using one-way analysis of variance (ANOVA) based on the Welch t test, and DEGs were selected by |FC| ≥ 1.5 and p ≤ 0.05.
DOI: 10.5522/04/28044644
title: X-CT volume of a mineral inclusion within diamond Ju5-104 (4x objective)

description: Micron-scale X-CT of a mineral inclusion within a diamond. Comprised of breyite (CaSiO3) and perovskite (CaTiO3). Measurements were conducted at the I13 beamline of Diamond Light Source. 1800 projections were collected over a 180 degree rotation on a pco.edge 5.5 sCMOS Camera using a 4x objective lens (0.05 second exposures; 0.81 μm voxels).Diamond Ju5-104, from the Juina-5 kimberlite pipe, Brazil.
DOI: 10.5522/04/28044644.v1
title: X-CT volume of a mineral inclusion within diamond Ju5-104 (4x objective)

description: Micron-scale X-CT of a mineral inclusion within a diamond. Comprised of breyite (CaSiO3) and perovskite (CaTiO3). Measurements were conducted at the I13 beamline of Diamond Light Source. 1800 projections were collected over a 180 degree rotation on a pco.edge 5.5 sCMOS Camera using a 4x objective lens (0.05 second exposures; 0.81 μm voxels).Diamond Ju5-104, from the Juina-5 kimberlite pipe, Brazil.
DOI: 10.15468/dl.9sejhz
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argyropelecus olfersii (Cuvier, 1829)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 106 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038870-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3741047_d1.v1
title: Additional file 10: Table S9. of Characterization of genome-wide segmental duplications reveals a common genomic feature of association with immunity among domestic animals

description: Analyses of genes detected in SD regions based on OrthoDB. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3741050_d1.v1
title: Additional file 1: of Outcomes of autologous bone marrow mononuclear cells for cerebral palsy: an open label uncontrolled clinical trial

description: Stem cell transplantation for cerebral palsy. This is a dataset file of study on autologous bone marrow mononuclear cells for cerebral palsy. The data includes demographic data, gross motor function of patients with cerebral palsy such as GMFM-88 total score, GMFM-66 percentile, and complication figures. The dataset consists of 40 observations and 44 variables (XLSX 51 kb)
DOI: 10.6084/m9.figshare.c.3741047_d1
title: Additional file 10: Table S9. of Characterization of genome-wide segmental duplications reveals a common genomic feature of association with immunity among domestic animals

description: Analyses of genes detected in SD regions based on OrthoDB. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3741047_d2.v1
title: Additional file 1: Table S1.1-7. of Characterization of genome-wide segmental duplications reveals a common genomic feature of association with immunity among domestic animals

description: SD regions of 7 domestic species detected by WSSD method. (XLSX 772 kb)
DOI: 10.6084/m9.figshare.c.3741050_d1
title: Additional file 1: of Outcomes of autologous bone marrow mononuclear cells for cerebral palsy: an open label uncontrolled clinical trial

description: Stem cell transplantation for cerebral palsy. This is a dataset file of study on autologous bone marrow mononuclear cells for cerebral palsy. The data includes demographic data, gross motor function of patients with cerebral palsy such as GMFM-88 total score, GMFM-66 percentile, and complication figures. The dataset consists of 40 observations and 44 variables (XLSX 51 kb)