cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/pdh9422c2g
title: Up-regulation of lncRNA SNHG11 is related to malignant transformation of human bronchial epithelial cells induced by beryllium sulfate

description: Figure 1. BeSO4 impaired cell viability of 16HBE cells after 48 hr exposure. The data are expressed as the mean ± standard deviation, n=3. *p < 0.05, compared with the control group.

Figure 2. Morphological and proliferation vitality changes of 16HBE cells induced by long-term low-dose BeSO4 exposure. (A) Low-dose exposure to BeSO4 resulted in morphological changes of 16HBE cells. (B) Low-dose exposure to BeSO4 led to the loss of contact inhibition of 16HBE cells. (C-H) Low-dose exposure to BeSO4 enhanced cell proliferation ability and shortened doubling time of 16HBE cells. The data are expressed as the mean ± standard deviation, n=3. *p < 0.05, compared with the passage 0, #p < 0.05, compared with the control of corresponding passage.

Figure 3. Low-dose exposure to BeSO4 resulted in colony formation of 16HBE cells in soft agar. (A) The absence of cell colony in soft agar in the control group, a few colonies at the 25th passage, and an increase in the number of colonies at the 35th and 45th passage after BeSO4 exposure. (B) The colony formation efficiency (‰) was increased after BeSO4 exposure for 25 passages. The data are expressed as the mean ± standard deviation, n=3. *p < 0.05, compared with the passage 0, #p < 0.05, compared with the control of corresponding passage.

Figure 4. Dynamic changes of MMP9, MMP2, PCNA, cyclin D1, and p53 in 16HBE cells exposed to BeSO4 at different passages. (A) The expression levels of MMP9, MMP2, PCNA, cyclin D1, and p53 proteins were determined by western blot in 16HBE cells with or without BeSO4 exposure. (B-F) The proteins densitometric analysis. The data are expressed as the mean ± standard deviation, n=3. *p < 0.05, compared with the passage 0, #p < 0.05, compared with the control of corresponding passage.

Figure 5. The expression of lncRNAs at different passages of malignant transformation of 16HBE cells induced by BeSO4. The data are expressed as the mean ± standard deviation, n=3. *p < 0.05, compared with the passage 0, #p < 0.05, compared with the control of corresponding passage.

Figure 6. Changes of proliferation, invasion, and migration abilities of 16HBE and T-16HBE cells with or without SNHG11 interference. (A) The expression level of SNHG11 was detected by qRT-PCR after siRNA transfection. (B) The cell proliferation was detected by CCK-8 after SNHG11 knockdown. (C-D) Relative protein levels of MMP9, MMP2, PCNA, cyclin D1, and p53 in 16HBE and T-16HBE cells with or without SNHG11 siRNA transfection. (E-G) The cell invasion and migration abilities were detected by transwell assay after SNHG11 knockdown. The data are expressed as the mean ± standard deviation, n=3. *p < 0.05, compared with the control group, #p < 0.05, compared with the si-NC group.
DOI: 10.17632/yzftwdnbrm
title: Dataset: Aakash Exploration Services Limited (AAKASH.NS) Stock Performance

description: This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
DOI: 10.17632/3wrsz3jg7g
title: DataDM_RS_Purwodadi

description: Data set Pasien RS Purwodadi
DOI: 10.17632/4dzpspydn6
title: LINF_320038800

description: ribosomal protein L3; Leishmania infantum
DOI: 10.17632/5ffym975td
title: LINF_360081100

description: T-complex protein 1 - theta subunit | TCP1θ
Leishmania infantum (strain JPCM5)
DOI: 10.17632/89p883nxrg
title: Supplemental chart for calf diarrhea trials

description: This is part of the data about LGG alleviating calf diarrhea and improving calf health, which provides new ideas for the prevention and treatment of calf diarrhea, and also serves as a support for the publication of the article
DOI: 10.17632/8bjbtwc2fp
title: Gahlot et al. Mol Cell 2024_Part 4: Figure 6, Suppl Fig 1 and 9A

description: Raw data for the manuscript "Lysosomal damage sensing and lysophagy initiation by SPG20-ITCH" by Gahlot et al.
Original microscopy imaging files, uncropped western blots, uncropped Coomassie gels and automated image analysis pipelines used for the quantification of microscopy data.
The set is split into 8 parts because of data size (max upload per set is 10 GB).
Part 1: Figures 1A-G and S2C
Part 2: Figure 1F-G
Part 3: Figures 2-5 and S8A-B
Part 4: Figures 6, S1 and S9A
Part 5: Figure S2
Part 6: Figure S2D-E (n2)
Part 7: Figures S3-S7
Part 8: Figures S8-S10
DOIs for other parts:
Part 1: DOI: 10.17632/6kfbpr73w6.1
Part 2: DOI: 10.17632/3fjzxbr679.1
Part 3: DOI: 10.17632/988rrt5dk8.1
Part 5: DOI: 10.17632/pvz62pdt4n.1
Part 6: DOI: 10.17632/gdhpxjpsp5.1
Part 7: DOI: 10.17632/k5grf4464j.1
Part 8: DOI: 10.17632/mhzfnvnfws.1
DOI: 10.17632/c232vytrjx
title: POLICIES FOR CARBON-ZERO TARGETS: EXAMINING THE SPILLOVER EFFECTS OF RENEWABLE ENERGY AND PATENT APPLICATIONS ON ENVIRONMENTAL QUALITY IN EUROPE

description: the data and code was use for the study POLICIES FOR CARBON-ZERO TARGETS: EXAMINING THE SPILLOVER EFFECTS OF RENEWABLE ENERGY AND PATENT APPLICATIONS ON ENVIRONMENTAL QUALITY IN EUROPE
DOI: 10.17632/cc68gs65j6
title: PKM2 peptide mapping

description: Mapping of 15KPF-modified peptides by LC/MS/MS technology.
DOI: 10.17632/m8bmcp4krs
title: Data for: A mantle source of water in the Late Neoproterozoic appinitic Greendale Complex, Nova Scotia: An O and H isotopic study on amphiboles provides evidence of asthenospheric upwelling

description: Isotope, trace element geochemistry and calulated fractionation data
DOI: 10.17632/mzkk6m9cwp
title: Bacteriophage anti-defense genes that neutralize TIR and STING immune responses

description: Data for Ho et al., 2023
DOI: 10.17632/rgrp7hjx6v
title: Data for: Catalytic wet peroxide oxidation of natural organic matter to enhance the treatment of surface waters at urban and rural drinking water plants

description: The efficiency of the CWPO process driven by an Al/Fe-PILC clay catalyst was evaluated in the removal of dissolved natural organic matter from different real water supplies: either raw or partially-treated water at several stages of drinking water urban plants (three points at three different UPs), or drinking water rural plants (five RPs) were processed at natural and varied conditions of pH, temperature, and environmental pressure. The optimal conditions of the CWPO reaction were refined taking into account the presence of well-known scavenging, inorganic anions in real surface water supplies. Besides, the catalyst preparation from technical-grade reagents was assessed. The catalytic results are analyzed in terms of DOC and total nitrogen mineralization, color removal (456 nm), the evolution of SUVA254, and efficiency of H2O2 consumption, but also taking into account the influence of the physicochemical properties displayed by the input natural water samples (pH, temperature, apparent color, UV254 absorbance, turbidity, alkalinity, and contents of main inorganic anions) on the catalytic performance using statistical tools. This dataset displays all the raw and treated data regarding the catalytic wet peroxide oxidation of dissolved Natural Organic Matter (NOM) in all, a synthetic surrogate of NOM, and several real surface water samples collected at urban and rural drinking water treatment plants (DWTPs). The catalytic reactions were performed in the presence of Al/Fe-PILC clay catalysts. The data here shown consists of: 
1. Physicochemical properties of the Al/Fe-PILC clay catalysts used. 
2. Identification of the real surface water samples studied.
3. Average standard deviations for all catalytic responses as a function of the type of water and DWTP, as the quality control of the catalytic data. 
4. Characteristics of the statistical optimization of the CWPO degradation of NOM and the experimental data obtained (Factors, levels, covariates). 
5. Multiple regression analysis measuring the correlation of the physicochemical properties of the input real water samples over every catalytic response. 
6. Final average DOC values for the effluents of every stage of treatment at DWTPs and the CWPO treatment. 
7. Current stages of treatment at the urban conventional DWTPs. 
8. Composition of the synthetic surrogate of dissolved NOM employed for the statistical optimization of the CWPO catalytic degradation. 
9. Estimated response surface plots for every catalytic response and Desirability-based multiresponse surface which allowed establishing the optimal reaction conditions. 
10. Measured color removal in urban and rural plants through CWPO treatment. 
11. Measured consumption of hydrogen peroxide at urban and rural plants through CWPO treatment. 
12. Measured nitrogen removal through CWPO treatment. 
13. pHpzc of the Al/Fe-PILC clay catalyst.
DOI: 10.17632/t7s5jxm8r6
title: Table2

description: Autologous and allogeneic epithelial cells-based drugs
DOI: 10.17632/3k3dhvsbgn
title: Demonstration of MSCG-Net's edge deployment.

description: None
DOI: 10.17632/3nd8h6krjg
title: LINF_140017400

description: Kinesin K39; Leishmania infantum (strain JPCM5)
DOI: 10.17632/4k3ygzrrmz
title: LDHU3_14.1610

description: Bifunctional NAD(P)H-hydrate repair enzyme; Leishmania donovani (HU3 strain)
DOI: 10.17632/5n8v8fsncr
title: Cultivation and cryopreservation of Cryptosporidium

description: Data of the study 'Cultivation of host-adapted Cryptosporidium parvum and Cryptosporidium hominis
using enteroids for cryopreservation of isolates and transcriptomic studies of infection'
DOI: 10.17632/6dj3c6dw92
title: Organic grave good-related soil microorganisms: read-out of soil biological memory for archaeological research

description: Nucleotide sequences of biotechnologically significant bacterial strains isolated from ancient graves
DOI: 10.17632/6gjfzhnnkg
title: Fullfillment

description: This is the dataset that was prepared for the study of integration of mathematical models with the study of human behaviour. This serves as a powerful tool in deciphering complex systems and unraveling patterns that might otherwise remain obscured. These models offer structured frameworks, facilitate predictive analysis, and encourage interdisciplinary collaboration. However, their effectiveness is enhanced when coupled with qualitative insights and an appreciation of the inherent complexity of human behaviour. Therefore, while mathematical models provide invaluable insights, they are most potent when complemented by a nuanced understanding of the multifaceted nature of human actions and interactions.
DOI: 10.17632/6jkp5f5r54
title: Pearl River estuary carbonate parameters

description: This data is about carbonate parameters along the Pearl River estuary from April 2015 to January 2016.
DOI: 10.17632/6m53y8w6jn
title: LINF_060011000

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/b64ggb36ht
title: Normative Documents Interactive Question Answering Dataset (NDIQAD)

description: This dataset consists of questions and answers based on selected normative documents. It includes 12 normative documents from different universities and banks, e.g. Study Rules of Mendel University in Brno, MIT Term Regulations and Examination Policies or Terms and Conditions for Personal Line of Credit (PLOC) of HSBC bank. These documents are manually annotated with 1767 questions by 15 annotators. The average document length is 14 pages. The dataset has 12.8 questions per page, 1.1 questions per paragraph, 33% coverage of paragraphs on average.

Questions are formed as one sentence. Answers are exact pieces of document texts. The searched area of one question is always one whole document. Each question-answer pair is also accompanied with a path leading over headings of the document from the document's root to the section containing the answer. This structural information enables testing of interactive question answering when the QA system is asking supplementary questions to limit the number of answers by disambiguating the document section. 

The dataset contains the original documents in PDF together with questions and answers in CSV files. The CSV files use semicolon [;] as the separator, and optionally double quotes ["] to escape strings. The double quote is doubled when used inside a text [""]. Each row has four attributes, see an example of a dataset item below.

Document:  Study Rules of Mendel University in Brno
Path: Study Rules / 2 Study in Bachelor’s and Master’s Degree Programs / 2.11 Study
interruption
Question: How can I interrupt my study?
Answer: Student’s study may be interrupted at the student’s request or ex officio.

You can find all questions twice in the dataset. The first version is the original question as written by the annotator. The second version marked "optimized" contains questions where the first person ("I", "me", "my") has been replaced by the actor of the document (a student or a client). This replacement is done automatically and can improve QA performance.

This dataset is unique mainly due to the type of the documents. Our focus is on normative documents with strict consistent formatting, numbered headings and paragraphs, low use of pronouns, etc. We do not focus on national laws as the majority of other research in this field, rather we focus on documents used to support internal processes in large organisations. We found that current QA methods do not perform well on this kind of documents. Hence, we have introduced this dataset to address the issues and we have also presented a new approach to QA on normative documents, see https://www.sciencedirect.com/science/article/pii/S0957417421016158?dgcid=coauthor
DOI: 10.17632/jjh9c9nvz2
title: MicroSwimmer_DesignFile

description: Design file(CAD,STL) of micro Swimmer robotics
DOI: 10.17632/pxtjgshzzc
title: Mathematica Code and Data to replicate  "More birds than stones --  A framework for second-best energy and climate policy adjustments" 

description: *******************************
* Model documentation
* 
* "More birds than stones - A framework for second-best energy and climate policy adjustments"
*
* Carolyn Fischer, Michael Huebler &  Oliver Schenker
*
* September 2021
*******************************

This file documents the model used to run the numerical simulations in this paper. The model and its calibration is described in Section 5 of the paper

The model has been programmed in Mathematica. In order to execute the model a running Mathematica environment is necessary.


****************************
FHS_base-first-best.nb

This is the base file that always needs to run first. It calibrates the model and computes the relevant benchmarks -- the no-policy and the first-best policy case.
****************************

The subsequent files are then 2nd-best simulations under incomplete policies.
We recommend to clear memory after each simulation of incomplete policies and start with the base file again. 

****************************
FHS_2ndb_no_ee.nb

* No Energy Efficiency Subsidies
Generates table 3 in the paper and the respective part in table 6 on missing energy efficiency subsidies. It generates also the respective part in table A.4 in the appendix.

****************************
FHS_2ndb_no_rnd.nb

* No R&D Subsidies
Generates Table 4 in the paper and the respective part in Table 6. It generates also the respective part in table A.4 in the appendix.


****************************
FHS_2ndb_no_lbd.nb

* No Output Subsidies for Renewables
Generates Table 5 in the paper and the respective part in Table 6. It generates also the respective part in table A.4 in the appendix.

******************
DOI: 10.17632/rcjmffr557
title: LINF_300006100

description: hypothetical protein - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/tgpr43mz3x
title: LINF_260011600

description: protein disulfide isomerase | PDI40
Leishmania infantum (strain JPCM5)
DOI: 10.17632/xtsnhzr7ng
title: Data for: Groundwater Recharge Response To Reduced Irrigation Pumping

description: Georeferenced geophysical data layers for 3 field sites are stored in SI1-SI3 (geotiffs). Table SI4.xlsx contains chloride mass bass results for 9 soil cores. Additional information about the study are provided in the main paper.
DOI: 10.17632/233mjz3kd3
title: Supplementary figures and equations for "Radiometric approaches with carbon-14-labeled molecules for determining herbicide fate in plant systems"

description: In this dataset we present the correct version of the supplementary information of the published article 
"Munhoz-Garcia, G. V., Takeshita, V., de Werk Pinácio, C., Cardoso, B. C., Dalla Vecchia, B., Nalin, D., ... & Tornisielo, V. L. (2024). Radiometric approaches with carbon-14-labeled molecules for determining herbicide fate in plant systems. Ecotoxicology and Environmental Safety, 284, 117003." https://doi.org/10.1016/j.ecoenv.2024.117003

It is occurring because the Editorial office was not available to publish a new version of this material.
DOI: 10.17632/32y536msxd
title: LDHU3_15.0720

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/3784hv5vkv
title: Danish/Norwegian conversational data

description: Appendix for the paper "Language specific constraints on conversation: Evidence from Danish and Norwegian". Coding schemes, scripts and data are provided below.
DOI: 10.17632/797y645yg7
title: Mohs Surgery in Darker Phototypes (Supplemental materials)

description: Supplemental document containing search strategy and detailed rationale for inclusion criteria and research methodology. Complete extracted data and references are also listed here for included studies.
DOI: 10.17632/k9rwwmppv3
title: LDHU3_02.0820

description: DNA-directed RNA polymerase III subunit RPC3; Leishmania donovani (HU3 strain)
DOI: 10.17632/m3t484xjyf
title: LINF_110012000

description: aminopeptidase; Leishmania infantum
DOI: 10.17632/xyvdnnk6dk
title: cdugksFOAM

description: A novel X-space parallel framework is introduced. In contrast to traditional discrete physical/velocity space decomposition parallelization methods, it can decompose each space in a hybrid manner and efficiently parallelize the computation. For better conservation of the macroscopic physical variables, flow properties in each cell are updated by moments of microscopic variable fluxes, which preserves particle multiscale information under sparse velocity space mesh. Several test cases, which include 2D lid-driven cavity flow in the transition flow regime, hypersonic rarefied flow past a 3D sphere, are carried out to verify the accuracy of the conserved discrete unified gas kinetic scheme to simulate the flows in all flow regimes. A large-scale parallel computational test case of 3D sphere with 101,600 physical mesh cells and 62,744 velocity mesh cells is conducted to measure the parallel efficiency of the conserved dugksFoam code. A significant superlinear speedup of 1631.87 has been achieved on 1120 cores.
DOI: 10.17632/297yx2styt
title: Data of Cambrian carbonate concretions to Mendeley

description: This contains the results of a series of organic and inorganic geochemical analyses of the two Cambrian carbonate nodules, such as biomarker content, mineral composition, and trace and rare earth element distribution data.
DOI: 10.17632/3bh7dk6s4v
title: Risk factors for Early Childhood Caries

description: We aimed to perform a systematic review to assess current evidence for the association between various risk factors and Early Childhood Caries (ECC) prevalence or incidence. We included prospective and retrospective cohort and case-control studies. Two reviewers searched PubMed, Embase, IndMed, Cochrane library, EBSCO, LILACS and other sources through July 2016 to identify published and non-published studies without any language restrictions. We assessed risk of bias using the Newcastle-Ottawa Scale for observational studies. The included studies were categorized into lower income, lower middle income, upper middle income and upper income countries according to the World Bank classification. Data was summarized in a meta-analysis using fixed and random-effects inverse-generic meta-analyses. From 3178 screened records, 76 studies (59 cohort and 17 case control) evaluating a total of 3,32,792 individuals were included. Twenty two were of high and 35 of moderate and 22 of low quality. One hundred and twenty one risk factors were found to be significantly related to the prevalence or incidence of ECC. The strongest risk factors found in the high income countries were the presence of dentinal caries (dmft&gt;0) [OR 4.12 (2.18-8.16)], high levels of streptococcus mutans [OR 3.83 (1.81-8.09)], frequent consumption of sweetened foods [OR 3.14 (0.89-11.04)], poor oral hygiene [OR 3.12 (1.77-5.49)] and visible plaque present [OR 3.10 (2.0-4.80)]. In the upper middle income countries presence of enamel defects [OR – 14.62 (6.10-35.03)] and high levels of streptococcus mutans [OR 9.21 (4.97-17.07)] were found significant. Only one study was conducted in the lower middle income category. No studies in the lower income countries evaluated the risk factors of ECC. In conclusion the risk factors found to be significant with ECC were presence of enamel defects, high levels of streptococcus mutans, presence of dentinal caries, frequent consumption of sweetened foods, poor oral hygiene and visible plaque. (registered with PROSPERO [CRD42016027476])
DOI: 10.17632/3dz7ndkbb2
title: marcamljm

description: https://repositorio.udes.edu.co/entities/publication/fd07c357-c5ae-476a-b8f0-4426f507dba7