cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3529277.v1
title: Data Paper. Data Paper

description: File List Fertsyntraitsall_Jan27_2008.txt Description This synthetic data set contains plant species relative abundance measures from 35 nitrogen (N) fertilization experiments conducted at 10 sites across North America. The data set encompasses the fertilization responses of 575 taxa from 1159 experimental plots. The methodology varied among experiments, in particular with regard to the type and amount of N added, plot size, species composition measure (biomass harvest, pin count, or percent cover), additional experimental manipulations, and experimental duration. At each site, each species has been classified according to a number of easily identified categorical functional traits, including life history, life form, the number of cotyledons, height relative to the canopy, potential for clonal growth, and nativity to the United States. Additional data are available for many sites, indicated by references to publications and web sites. Analyses of these data have shown that N enrichment significantly alters community composition in ways that are predictable on the basis of plant functional traits as well as environmental context. This data set could be used to answer a variety of questions about how plant community composition and structure respond to environmental changes. <i>Key words</i>: <i>database; fertilization; functional trait; nitrogen; plant community; synthesis</i>.
DOI: 10.6084/m9.figshare.3529274
title: Appendix A. Geometric rendition of model colonies.

description: Geometric rendition of model colonies.
DOI: 10.6084/m9.figshare.3529271
title: Appendix B. Summary table of parameters and equations together with best-fit parameter estimates for light and photosynthesis models.

description: Summary table of parameters and equations together with best-fit parameter estimates for light and photosynthesis models.
DOI: 10.6084/m9.figshare.3529274.v1
title: Appendix A. Geometric rendition of model colonies.

description: Geometric rendition of model colonies.
DOI: 10.6084/m9.figshare.3529271.v1
title: Appendix B. Summary table of parameters and equations together with best-fit parameter estimates for light and photosynthesis models.

description: Summary table of parameters and equations together with best-fit parameter estimates for light and photosynthesis models.
DOI: 10.6084/m9.figshare.3529268
title: Appendix C. Three-dimensional geometric model of light interception by foliose corals.

description: Three-dimensional geometric model of light interception by foliose corals.
DOI: 10.6084/m9.figshare.3529268.v1
title: Appendix C. Three-dimensional geometric model of light interception by foliose corals.

description: Three-dimensional geometric model of light interception by foliose corals.
DOI: 10.6084/m9.figshare.3529262
title: Appendix A. Model derivation, statistical methods, and additional results.

description: Model derivation, statistical methods, and additional results.
DOI: 10.6084/m9.figshare.3529262.v1
title: Appendix A. Model derivation, statistical methods, and additional results.

description: Model derivation, statistical methods, and additional results.
DOI: 10.6084/m9.figshare.3529259
title: Supplement 1. Matlab and C code for fitting linear and Lotka-Volterra models to transition probability data.

description: File List linearmodels.zip LVmodels.zip Description linearmodels.zip is a zip archive of Matlab code for fitting continuous-time linear Markov models to data on transition probabilities. See README.txt in the zip archive for full details. LVmodels.zip is a zip archive of C code for fitting Lotka-Volterra models to data on transition probabilities. See README.txt in the zip archive for full details.
DOI: 10.6084/m9.figshare.3529259.v1
title: Supplement 1. Matlab and C code for fitting linear and Lotka-Volterra models to transition probability data.

description: File List linearmodels.zip LVmodels.zip Description linearmodels.zip is a zip archive of Matlab code for fitting continuous-time linear Markov models to data on transition probabilities. See README.txt in the zip archive for full details. LVmodels.zip is a zip archive of C code for fitting Lotka-Volterra models to data on transition probabilities. See README.txt in the zip archive for full details.
DOI: 10.6084/m9.figshare.3529256
title: Appendix A. Derivation of the Fokker-Planck equation for space-use.

description: Derivation of the Fokker-Planck equation for space-use.
DOI: 10.6084/m9.figshare.3529253
title: Appendix A. Reversed treelines on Cerro la Jara, a small volcanic dome in the Valle Grande.

description: Reversed treelines on Cerro la Jara, a small volcanic dome in the Valle Grande.
DOI: 10.6084/m9.figshare.3529253.v1
title: Appendix A. Reversed treelines on Cerro la Jara, a small volcanic dome in the Valle Grande.

description: Reversed treelines on Cerro la Jara, a small volcanic dome in the Valle Grande.
DOI: 10.6084/m9.figshare.3529250
title: Appendix B. Table characterizing each experimental site location, including the site type, year planted, soil texture, nutrient concentrations, and moisture, thermal conditions, and standing herbaceous biomass.

description: Table characterizing each experimental site location, including the site type, year planted, soil texture, nutrient concentrations, and moisture, thermal conditions, and standing herbaceous biomass.
DOI: 10.6084/m9.figshare.3529250.v1
title: Appendix B. Table characterizing each experimental site location, including the site type, year planted, soil texture, nutrient concentrations, and moisture, thermal conditions, and standing herbaceous biomass.

description: Table characterizing each experimental site location, including the site type, year planted, soil texture, nutrient concentrations, and moisture, thermal conditions, and standing herbaceous biomass.
DOI: 10.6084/m9.figshare.3529247
title: Appendix C. Experimental site layout and a matrix of treatment combinations.

description: Experimental site layout and a matrix of treatment combinations.
DOI: 10.6084/m9.figshare.3529247.v1
title: Appendix C. Experimental site layout and a matrix of treatment combinations.

description: Experimental site layout and a matrix of treatment combinations.
DOI: 10.6084/m9.figshare.3529244
title: Appendix D. Typical seedling height and needle growth for two-year old seedlings at a cold site (LSAM2, mean summer minimum temperature -0.67°C) and a warm site (LSAF, mean summer minimum temperature 2.14°C).

description: Typical seedling height and needle growth for two-year old seedlings at a cold site (LSAM2, mean summer minimum temperature -0.67°C) and a warm site (LSAF, mean summer minimum temperature 2.14°C).
DOI: 10.6084/m9.figshare.3529244.v1
title: Appendix D. Typical seedling height and needle growth for two-year old seedlings at a cold site (LSAM2, mean summer minimum temperature -0.67°C) and a warm site (LSAF, mean summer minimum temperature 2.14°C).

description: Typical seedling height and needle growth for two-year old seedlings at a cold site (LSAM2, mean summer minimum temperature -0.67°C) and a warm site (LSAF, mean summer minimum temperature 2.14°C).
DOI: 10.6084/m9.figshare.3529241
title: Appendix A. The drainage size, hydrologic characteristics, vegetation structure, and soil respiration for 15 sites distributed across the Sycamore Creek catchment.

description: The drainage size, hydrologic characteristics, vegetation structure, and soil respiration for 15 sites distributed across the Sycamore Creek catchment.
DOI: 10.6084/m9.figshare.3529241.v1
title: Appendix A. The drainage size, hydrologic characteristics, vegetation structure, and soil respiration for 15 sites distributed across the Sycamore Creek catchment.

description: The drainage size, hydrologic characteristics, vegetation structure, and soil respiration for 15 sites distributed across the Sycamore Creek catchment.
DOI: 10.6084/m9.figshare.3529238
title: Appendix B. Monthly soil moisture data for sites 1–4.

description: Monthly soil moisture data for sites 1–4.
DOI: 10.6084/m9.figshare.3529238.v1
title: Appendix B. Monthly soil moisture data for sites 1–4.

description: Monthly soil moisture data for sites 1–4.
DOI: 10.6084/m9.figshare.3529235
title: Appendix C. The results from multiple regression analyses between surface soil moisture and climatic variables.

description: The results from multiple regression analyses between surface soil moisture and climatic variables.
DOI: 10.6084/m9.figshare.3529235.v1
title: Appendix C. The results from multiple regression analyses between surface soil moisture and climatic variables.

description: The results from multiple regression analyses between surface soil moisture and climatic variables.
DOI: 10.6084/m9.figshare.3529232
title: Appendix D. Monthly soil respiration data for sites 1–4.

description: Monthly soil respiration data for sites 1–4.
DOI: 10.6084/m9.figshare.3529232.v1
title: Appendix D. Monthly soil respiration data for sites 1–4.

description: Monthly soil respiration data for sites 1–4.
DOI: 10.6084/m9.figshare.3529229
title: Appendix A. Literature review for Littorina littorea, L. saxatilis, and L. obtusata, documenting sample sizes and trematode species richness by site.

description: Literature review for Littorina littorea, L. saxatilis, and L. obtusata, documenting sample sizes and trematode species richness by site.
DOI: 10.5281/zenodo.4014348
title: Data for "Applying Heat and Humidity using Stove Boiled Water for Decontamination of N95 Respirators in Low Resource Settings"

description: Raw Data
DOI: 10.6084/m9.figshare.3529229.v1
title: Appendix A. Literature review for Littorina littorea, L. saxatilis, and L. obtusata, documenting sample sizes and trematode species richness by site.

description: Literature review for Littorina littorea, L. saxatilis, and L. obtusata, documenting sample sizes and trematode species richness by site.
DOI: 10.5281/zenodo.4014347
title: Data for "Applying Heat and Humidity using Stove Boiled Water for Decontamination of N95 Respirators in Low Resource Settings"

description: Raw Data
DOI: 10.6084/m9.figshare.3529226
title: Appendix B. Field collection sites in North America and Europe for Littorina littorea, L. saxatilis, and L. obtusata, documenting sample sizes and trematode species richness by site.

description: Field collection sites in North America and Europe for Littorina littorea, L. saxatilis, and L. obtusata, documenting sample sizes and trematode species richness by site.
DOI: 10.6084/m9.figshare.3529223
title: Appendix C. Trematode taxonomy operational procedures for Table 1 prevalence data.

description: Trematode taxonomy operational procedures for Table 1 prevalence data.
DOI: 10.6084/m9.figshare.3529223.v1
title: Appendix C. Trematode taxonomy operational procedures for Table 1 prevalence data.

description: Trematode taxonomy operational procedures for Table 1 prevalence data.
DOI: 10.6084/m9.figshare.3529220
title: Appendix A. HPLC chromatographs from Alliaria petiolata leaves and roots.

description: HPLC chromatographs from Alliaria petiolata leaves and roots.
DOI: 10.6084/m9.figshare.3529220.v1
title: Appendix A. HPLC chromatographs from Alliaria petiolata leaves and roots.

description: HPLC chromatographs from Alliaria petiolata leaves and roots.
DOI: 10.6084/m9.figshare.3529217
title: Appendix B. Representative HPLC chromatographs of fractionated garlic mustard extracts.

description: Representative HPLC chromatographs of fractionated garlic mustard extracts.
DOI: 10.6084/m9.figshare.3529217.v1
title: Appendix B. Representative HPLC chromatographs of fractionated garlic mustard extracts.

description: Representative HPLC chromatographs of fractionated garlic mustard extracts.
DOI: 10.6084/m9.figshare.3529214
title: Appendix C. Effect of root exudate fractions from Alliaria petiolata on the viability of AM fungi in soils from six sites in Europe and six sites in North America.

description: Effect of root exudate fractions from Alliaria petiolata on the viability of AM fungi in soils from six sites in Europe and six sites in North America.
DOI: 10.6084/m9.figshare.3529211
title: Appendix A. Identity of host plant and fungal species pairings and effect sizes [ln(R)] for seedling biomass, shoot height, and shoot:root ratio for each study used in meta-analysis and full literature citations.

description: Identity of host plant and fungal species pairings and effect sizes [ln(R)] for seedling biomass, shoot height, and shoot:root ratio for each study used in meta-analysis and full literature citations.
DOI: 10.6084/m9.figshare.3529208
title: Appendix B. Identity of host plant and fungal species pairings with associated effect sizes [ln(R)] for seedling biomass and full literature citations.

description: Identity of host plant and fungal species pairings with associated effect sizes [ln(R)] for seedling biomass and full literature citations.
DOI: 10.6084/m9.figshare.3529205
title: Appendix A. Estimates of selection differentials for Lotus tolerance, resistance, and competitive ability in each environment.

description: Estimates of selection differentials for Lotus tolerance, resistance, and competitive ability in each environment.
DOI: 10.6084/m9.figshare.3529205.v1
title: Appendix A. Estimates of selection differentials for Lotus tolerance, resistance, and competitive ability in each environment.

description: Estimates of selection differentials for Lotus tolerance, resistance, and competitive ability in each environment.
DOI: 10.6084/m9.figshare.3529202
title: Appendix A. Summary of measurements taken from the mesocosms in the field experiment for each treatment, summary tables for the repeated-measures analysis of variance (RM-ANOVA) for each response variable in the field experiment, and summary tables for the two-way analysis of variance (ANOVA) for cumulative bacterial productivity (BP) and cumulative bacterial respiration (BR) in the field experiment.

description: Summary of measurements taken from the mesocosms in the field experiment for each treatment, summary tables for the repeated-measures analysis of variance (RM-ANOVA) for each response variable in the field experiment, and summary tables for the two-way analysis of variance (ANOVA) for cumulative bacterial productivity (BP) and cumulative bacterial respiration (BR) in the field experiment.
DOI: 10.6084/m9.figshare.3529202.v1
title: Appendix A. Summary of measurements taken from the mesocosms in the field experiment for each treatment, summary tables for the repeated-measures analysis of variance (RM-ANOVA) for each response variable in the field experiment, and summary tables for the two-way analysis of variance (ANOVA) for cumulative bacterial productivity (BP) and cumulative bacterial respiration (BR) in the field experiment.

description: Summary of measurements taken from the mesocosms in the field experiment for each treatment, summary tables for the repeated-measures analysis of variance (RM-ANOVA) for each response variable in the field experiment, and summary tables for the two-way analysis of variance (ANOVA) for cumulative bacterial productivity (BP) and cumulative bacterial respiration (BR) in the field experiment.
DOI: 10.6084/m9.figshare.3529199
title: Appendix B. Derivation of the bacterial growth efficiency (BGE) function and parameters.

description: Derivation of the bacterial growth efficiency (BGE) function and parameters.
DOI: 10.6084/m9.figshare.3529199.v1
title: Appendix B. Derivation of the bacterial growth efficiency (BGE) function and parameters.

description: Derivation of the bacterial growth efficiency (BGE) function and parameters.
DOI: 10.6084/m9.figshare.3529196
title: Appendix C. Detailed figures for single parameter sensitivity analysis.

description: Detailed figures for single parameter sensitivity analysis.
DOI: 10.6084/m9.figshare.3529196.v1
title: Appendix C. Detailed figures for single parameter sensitivity analysis.

description: Detailed figures for single parameter sensitivity analysis.
DOI: 10.6084/m9.figshare.3529193
title: Appendix D. Effects of initial conditions.

description: Effects of initial conditions.
DOI: 10.6084/m9.figshare.3529193.v1
title: Appendix D. Effects of initial conditions.

description: Effects of initial conditions.
DOI: 10.6084/m9.figshare.3529190
title: Appendix E. Output from PROC MIXED for the factorial manipulations of six parameters plus initial bacterial carbon concentrations.

description: Output from PROC MIXED for the factorial manipulations of six parameters plus initial bacterial carbon concentrations.
DOI: 10.6084/m9.figshare.3529190.v1
title: Appendix E. Output from PROC MIXED for the factorial manipulations of six parameters plus initial bacterial carbon concentrations.

description: Output from PROC MIXED for the factorial manipulations of six parameters plus initial bacterial carbon concentrations.
DOI: 10.6084/m9.figshare.3529187
title: Appendix F. Labile carbon concentrations are the key to understanding the effects of variable BGE on pulse/press differences.

description: Labile carbon concentrations are the key to understanding the effects of variable BGE on pulse/press differences.
DOI: 10.6084/m9.figshare.3529187.v1
title: Appendix F. Labile carbon concentrations are the key to understanding the effects of variable BGE on pulse/press differences.

description: Labile carbon concentrations are the key to understanding the effects of variable BGE on pulse/press differences.
DOI: 10.6084/m9.figshare.3529184
title: Appendix G. The effect of simulation duration on cumulative BP and BPPu:Pr ratios for nominal parameter values.

description: The effect of simulation duration on cumulative BP and BPPu:Pr ratios for nominal parameter values.
DOI: 10.6084/m9.figshare.3529184.v1
title: Appendix G. The effect of simulation duration on cumulative BP and BPPu:Pr ratios for nominal parameter values.

description: The effect of simulation duration on cumulative BP and BPPu:Pr ratios for nominal parameter values.
DOI: 10.6084/m9.figshare.3529181
title: Appendix A. Supplemental methods.

description: Supplemental methods.
DOI: 10.6084/m9.figshare.3529181.v1
title: Appendix A. Supplemental methods.

description: Supplemental methods.
DOI: 10.6084/m9.figshare.3529178
title: Appendix A. A table showing the general characteristics of the surveyed sites.

description: A table showing the general characteristics of the surveyed sites.
DOI: 10.6084/m9.figshare.3529175
title: Appendix B. A table providing correlations of NMDS axes with vegetation variables.

description: A table providing correlations of NMDS axes with vegetation variables.
DOI: 10.6084/m9.figshare.3529172
title: Appendix C. A table showing loadings of the PCA axes performed with climatic variables.

description: A table showing loadings of the PCA axes performed with climatic variables.
DOI: 10.6084/m9.figshare.3529172.v1
title: Appendix C. A table showing loadings of the PCA axes performed with climatic variables.

description: A table showing loadings of the PCA axes performed with climatic variables.
DOI: 10.6084/m9.figshare.3529169
title: Appendix D. Species recorded in each park or reserve surveyed.

description: Species recorded in each park or reserve surveyed.
DOI: 10.6084/m9.figshare.3529166
title: Appendix E. Species richness and turnover rates in each park from one year to the next, as estimated with the software COMDYN.

description: Species richness and turnover rates in each park from one year to the next, as estimated with the software COMDYN.
DOI: 10.6084/m9.figshare.3529163
title: Appendix F. A summary of turnover rates or spatial dissimilarity between parks and/or reserves.

description: A summary of turnover rates or spatial dissimilarity between parks and/or reserves.
DOI: 10.6084/m9.figshare.3529160
title: Supplement 1. Script with R code for statistical analysis.

description: File List ScriptMeynard&Quinn.R -- Annotated R code. Description This file contains code to replicate the statistical analysis performed in the paper, and comments that will help the reader understand the commands. The file can be opened within any text editor and copied into the R command line. It can also be opened from the R script environment. Testing of spatial autocorrelation on raw variables and residuals from regressions are demonstrated. The correlation matrix to perform the structural equation modeling (SEM) analysis is also provided, as well as code for different SEM analysis using this data. Required software: R statistical package, and additional libraries spdep and sem.
DOI: 10.6084/m9.figshare.3529157
title: Appendix A. Phylogenetic trees of woody plants and woody species abundances at Chamela Biological Station, Jalisco, Mexico.

description: Phylogenetic trees of woody plants and woody species abundances at Chamela Biological Station, Jalisco, Mexico.
DOI: 10.6084/m9.figshare.3529157.v1
title: Appendix A. Phylogenetic trees of woody plants and woody species abundances at Chamela Biological Station, Jalisco, Mexico.

description: Phylogenetic trees of woody plants and woody species abundances at Chamela Biological Station, Jalisco, Mexico.
DOI: 10.6084/m9.figshare.3529154
title: Appendix B. Dynamics within congeneric pairs.

description: Dynamics within congeneric pairs.
DOI: 10.6084/m9.figshare.3529151
title: Appendix A. Questionnaire that was e-mailed to 113 experienced field ecologists.

description: Questionnaire that was e-mailed to 113 experienced field ecologists.
DOI: 10.6084/m9.figshare.3529154.v1
title: Appendix B. Dynamics within congeneric pairs.

description: Dynamics within congeneric pairs.
DOI: 10.6084/m9.figshare.3529151.v1
title: Appendix A. Questionnaire that was e-mailed to 113 experienced field ecologists.

description: Questionnaire that was e-mailed to 113 experienced field ecologists.
DOI: 10.6084/m9.figshare.3529148
title: Appendix B. Past conceptual work related to ecological surprises.

description: Past conceptual work related to ecological surprises.
DOI: 10.6084/m9.figshare.3529148.v1
title: Appendix B. Past conceptual work related to ecological surprises.

description: Past conceptual work related to ecological surprises.
DOI: 10.6084/m9.figshare.3529145
title: Appendix A. Methods for the review and meta-analysis of avian functional diversity.

description: Methods for the review and meta-analysis of avian functional diversity.
DOI: 10.6084/m9.figshare.3529142
title: Appendix B. Analyses of cavity-nesting bees, wasps, and their natural enemies.

description: Analyses of cavity-nesting bees, wasps, and their natural enemies.
DOI: 10.6084/m9.figshare.3529142.v1
title: Appendix B. Analyses of cavity-nesting bees, wasps, and their natural enemies.

description: Analyses of cavity-nesting bees, wasps, and their natural enemies.
DOI: 10.6084/m9.figshare.3529139
title: Appendix A. Methodology of flower-visiting insect observations, pollination experiments, and functional group classification.

description: Methodology of flower-visiting insect observations, pollination experiments, and functional group classification.
DOI: 10.6084/m9.figshare.3529139.v1
title: Appendix A. Methodology of flower-visiting insect observations, pollination experiments, and functional group classification.

description: Methodology of flower-visiting insect observations, pollination experiments, and functional group classification.
DOI: 10.6084/m9.figshare.3529136
title: Appendix B. Results of general linear models using Type I sums of squares, testing the effects of functional group richness, species richness, and abundance on the pollination success of Coffea arabica and Coffea canephora.

description: Results of general linear models using Type I sums of squares, testing the effects of functional group richness, species richness, and abundance on the pollination success of Coffea arabica and Coffea canephora.