cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/vjp-mhd-y0l
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ebe-3w7-9bp
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w7m-8f2-wjn
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wvh-f42-fbl
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ytx-6p9-akp
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/872-ybb-g59
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/csv-gz6-la9
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l1v-ejp-xtj
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5nj-bqs-95v
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/86s-c51-y9g
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bsm-dal-pkd
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fxp-ah9-hll
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1qw-ek9-k2k
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/93q-cep-12e
title: Neoaulocystis Zhuravleva, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25505/fiz.icsd.cc2g383z
title: CSD 2267250: Experimental Crystal Structure Determination

description: Related Article: Jiayao Zhang, Saurav Bhattacharya, Talha Nisar, Veit Wagner, Ulrich Kortz|2023|Inorg.Chem.|62|19603|doi:10.1021/acs.inorgchem.3c02967
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/kwj-dmh-wba
title: †Leptestiidae Öpik, 1933

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nvj-6na-jxw
title: †Leangella Öpik, 1933

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25505/fiz.icsd.cc2g381x
title: CSD 2267248: Experimental Crystal Structure Determination

description: Related Article: Jiayao Zhang, Saurav Bhattacharya, Talha Nisar, Veit Wagner, Ulrich Kortz|2023|Inorg.Chem.|62|19603|doi:10.1021/acs.inorgchem.3c02967
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2g382y
title: CSD 2267249: Experimental Crystal Structure Determination

description: Related Article: Jiayao Zhang, Saurav Bhattacharya, Talha Nisar, Veit Wagner, Ulrich Kortz|2023|Inorg.Chem.|62|19603|doi:10.1021/acs.inorgchem.3c02967
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/f7a-fr7-vs3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/g9j-2x4-8js
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25505/fiz.icsd.cc2g380w
title: CSD 2267247: Experimental Crystal Structure Determination

description: Related Article: Jiayao Zhang, Saurav Bhattacharya, Talha Nisar, Veit Wagner, Ulrich Kortz|2023|Inorg.Chem.|62|19603|doi:10.1021/acs.inorgchem.3c02967
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/1yj-n86-p6z
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fj0-6jm-9db
title: Mastopora C.E.I. von Eichwald, 1840

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kaq-5x2-nlx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v72-m3v-ew9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vf4-2wy-p5p
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/56l-4s1-mvp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rrv-yb3-5as
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/97h-9zw-sry
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ctd-cna-88p
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4bl-l4x-cz6
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gfd-c34-1xj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dmn-e1y-jv4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pvr-9gh-eq5
title: †Hirnantia Lamont, 1935

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/evp-82g-3z2
title: †Dalmanella Hall & Clarke, 1892

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sap-jsz-byc
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25505/fiz.icsd.cc2h47lh
title: CSD 2297986: Experimental Crystal Structure Determination

description: Related Article: Kurt Mereiter, Franz Walter, Hans-Peter Bojar|2023|Min.Petrol.|117|761|doi:10.1007/s00710-023-00837-y
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/lk2-j4l-ftr
title: †Dalmanella Hall & Clarke, 1892

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/te6-9k0-sfz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pmk-mgj-m6y
title: †Cliftonia Foerste, 1909

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d42-tlz-m53
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x6y-kr2-4c3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/70d-at0-ypr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fb5-1we-a8x
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8rs-vev-b7t
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cd7-sc7-pnm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25505/fiz.icsd.cc2h4sfw
title: CSD 2298508: Experimental Crystal Structure Determination

description: Related Article: Sweta Yadav, Gopabandhu Panigrahi, Manish K. Niranjan, Jai Prakash|2024|J.Solid State Chem.|331|124535|doi:10.1016/j.jssc.2023.124535
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2h4zf2
title: CSD 2298694: Experimental Crystal Structure Determination

description: Related Article: Sweta Yadav, Gopabandhu Panigrahi, Manish K. Niranjan, Jai Prakash|2024|J.Solid State Chem.|331|124535|doi:10.1016/j.jssc.2023.124535
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/qx8-d28-8zb
title: †Cliftonia Foerste, 1909

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sg3-7fq-tc0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4py-mrp-3rw
title: †Cliftonia Foerste, 1909

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/szm-a5t-qsn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dvy-xas-p4p
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/flf-w3m-dx9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h0e-6pe-pvq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n2n-qn4-m3b
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jc9-n4x-cbg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t2e-75f-xsy
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/en8-4d1-epz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.26165/juelich-data/kzdqyd
title: Seed-to-plant-tracking: automated phenotyping of seeds and corresponding plants of Arabidopsis

description: Raw image data for "Seed-to-plant-tracking: automated phenotyping of seeds and corresponding plants of Arabidopsis " submitted to Frontiers in plant science
DOI: 10.3535/vcn-m42-3y6
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x2y-6px-55k
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f3l-1j0-l8c
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p4t-qys-hqn
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25514878
title: 3OS ChemoGenes Supplementary Data

description: Research article title: Genomic alterations in chemotherapy genes detected in three model Thai adolescent patients with fatal osteosarcoma at Maharaj Nakorn Chiang Mai Hospital, Thailand.ABSTRACT OBJECTIVE: Osteosarcoma is the most common primary bone malignancy among adolescents and young adults, characterized by a high mortality rate, though it remains a relatively rare disease overall. The treatment protocols can be complex and challenging. We conducted a comparative genomic variation study to identify genes involved in the metabolism of chemotherapy drugs that are affected by various genomic alterations. METHODS: This study investigated the germline and tumor genomes of three primary osteosarcoma patients who responded poorly to chemotherapy, later developed lung metastases, and ultimately succumbed to the disease. Whole Genome Sequencing (WGS) data for both the germline and tumor genomes of these patients were analyzed to identify deleterious single nucleotide polymorphisms (SNPs), copy number variations (CNVs), and structural variations (SVs) in genes associated with chemotherapy and cancer. An analysis of protein association networks was performed on the affected genes of each patient to identify both common and unique biological processes associated with osteosarcoma. RESULTS: A few pathogenic mutations were identified exclusively in patients P1 and P3. P1 exhibited a missense mutation in the PIK3CD gene and a mutation in a splice donor site of the TP53 gene. P3 was affected by more deleterious mutations, namely, a stop-gain mutation in the MLH1 gene and a frameshift mutation in the REV3L gene. The tumor genome of patient P1 was extensively affected by copy number variations (CNVs), whereas the tumor genomes of patients P2 and P3 demonstrated fewer regions with CNVs. Structural variations were detected in all three tumor genomes and affected different key genes involved in platinum drug resistance and DNA repair. All identified mutated genes were also correlated with the clinical features of the patients. CONCLUSIONS: The genetic makeup of osteosarcoma is complex and varies from patient to patient, potentially affecting processes related to cell death or resistance to chemotherapy. Our investigations suggest that structural alterations, such as copy number variations (CNVs) and structural variations (SVs), in genes involved in chemotherapy metabolism and DNA repair mechanisms in tumor biopsies, could be useful for clinicians to design chemotherapy regimens suitable for different osteosarcoma (OS) patients.KEYWORDS: Osteosarcoma, Genome, Single Nucleotide Polymorphisms, Copy Number Variations, Structural variations, Chemotherapy<br>
DOI: 10.6084/m9.figshare.25514878.v4
title: 3OS ChemoGenes Supplementary Data

description: Research article title: Genomic alterations in chemotherapy genes detected in three model Thai adolescent patients with fatal osteosarcoma at Maharaj Nakorn Chiang Mai Hospital, Thailand.ABSTRACT OBJECTIVE: Osteosarcoma is the most common primary bone malignancy among adolescents and young adults, characterized by a high mortality rate, though it remains a relatively rare disease overall. The treatment protocols can be complex and challenging. We conducted a comparative genomic variation study to identify genes involved in the metabolism of chemotherapy drugs that are affected by various genomic alterations. METHODS: This study investigated the germline and tumor genomes of three primary osteosarcoma patients who responded poorly to chemotherapy, later developed lung metastases, and ultimately succumbed to the disease. Whole Genome Sequencing (WGS) data for both the germline and tumor genomes of these patients were analyzed to identify deleterious single nucleotide polymorphisms (SNPs), copy number variations (CNVs), and structural variations (SVs) in genes associated with chemotherapy and cancer. An analysis of protein association networks was performed on the affected genes of each patient to identify both common and unique biological processes associated with osteosarcoma. RESULTS: A few pathogenic mutations were identified exclusively in patients P1 and P3. P1 exhibited a missense mutation in the PIK3CD gene and a mutation in a splice donor site of the TP53 gene. P3 was affected by more deleterious mutations, namely, a stop-gain mutation in the MLH1 gene and a frameshift mutation in the REV3L gene. The tumor genome of patient P1 was extensively affected by copy number variations (CNVs), whereas the tumor genomes of patients P2 and P3 demonstrated fewer regions with CNVs. Structural variations were detected in all three tumor genomes and affected different key genes involved in platinum drug resistance and DNA repair. All identified mutated genes were also correlated with the clinical features of the patients. CONCLUSIONS: The genetic makeup of osteosarcoma is complex and varies from patient to patient, potentially affecting processes related to cell death or resistance to chemotherapy. Our investigations suggest that structural alterations, such as copy number variations (CNVs) and structural variations (SVs), in genes involved in chemotherapy metabolism and DNA repair mechanisms in tumor biopsies, could be useful for clinicians to design chemotherapy regimens suitable for different osteosarcoma (OS) patients.KEYWORDS: Osteosarcoma, Genome, Single Nucleotide Polymorphisms, Copy Number Variations, Structural variations, Chemotherapy<br>
DOI: 10.3535/maj-7w8-gk3
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y8v-5e9-r3j
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25514878.v3
title: 3OS ChemoGenes Supplementary Data

description: Research article title: Genomic alterations in chemotherapy genes detected in three model Thai adolescent patients with fatal osteosarcoma at Maharaj Nakorn Chiang Mai Hospital, Thailand.ABSTRACT OBJECTIVE: Osteosarcoma is the most common primary bone malignancy among adolescents and young adults, characterized by a high mortality rate, though it remains a relatively rare disease overall. The treatment protocols can be complex and challenging. We conducted a comparative genomic variation study to identify genes involved in the metabolism of chemotherapy drugs that are affected by various genomic alterations. METHODS: This study investigated the germline and tumor genomes of three primary osteosarcoma patients who responded poorly to chemotherapy, later developed lung metastases, and ultimately succumbed to the disease. Whole Genome Sequencing (WGS) data for both the germline and tumor genomes of these patients were analyzed to identify deleterious single nucleotide polymorphisms (SNPs), copy number variations (CNVs), and structural variations (SVs) in genes associated with chemotherapy and cancer. An analysis of protein association networks was performed on the affected genes of each patient to identify both common and unique biological processes associated with osteosarcoma. RESULTS: A few pathogenic mutations were identified exclusively in patients P1 and P3. P1 exhibited a missense mutation in the PIK3CD gene and a mutation in a splice donor site of the TP53 gene. P3 was affected by more deleterious mutations, namely, a stop-gain mutation in the MLH1 gene and a frameshift mutation in the REV3L gene. The tumor genome of patient P1 was extensively affected by copy number variations (CNVs), whereas the tumor genomes of patients P2 and P3 demonstrated fewer regions with CNVs. Structural variations were detected in all three tumor genomes and affected different key genes involved in platinum drug resistance and DNA repair. All identified mutated genes were also correlated with the clinical features of the patients. CONCLUSIONS: The genetic makeup of osteosarcoma is complex and varies from patient to patient, potentially affecting processes related to cell death or resistance to chemotherapy. Our investigations suggest that structural alterations, such as copy number variations (CNVs) and structural variations (SVs), in genes involved in chemotherapy metabolism and DNA repair mechanisms in tumor biopsies, could be useful for clinicians to design chemotherapy regimens suitable for different osteosarcoma (OS) patients.KEYWORDS: Osteosarcoma, Genome, Single Nucleotide Polymorphisms, Copy Number Variations, Structural variations, Chemotherapy<br>
DOI: 10.3535/jzp-0zd-ndh
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p0v-7qa-q5c
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/661-zw6-m2q
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v55-3xb-6j4
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/54j-qw5-m4e
title: †Hirnantia Lamont, 1935

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6zf-qs6-2t9
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l67-hyl-qac
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vew-ppq-5qb
title: †Eostropheodonta Bancroft, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.