cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5k649t8q
title: MassIVE Reanalysis RMSV000000354.4899 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ATXN7L3 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.6233253
title: Dataset for the "Widespread Aseismic Slip Along the Makran Megathrust Triggered by the 2013 Mw 7.7 Balochistan Earthquake" paper

description: This dataset is used for the Widespread Aseismic Slip Along the Makran Megathrust Triggered by the 2013 Mw 7.7 Balochistan Earthquake paper. Containing the ascending and descending InSAR results processing by MintPy, and the processed observation and input files for BEAT.
DOI: 10.5281/zenodo.6233252
title: Dataset for the "Widespread Aseismic Slip Along the Makran Megathrust Triggered by the 2013 Mw 7.7 Balochistan Earthquake" paper

description: This dataset is used for the Widespread Aseismic Slip Along the Makran Megathrust Triggered by the 2013 Mw 7.7 Balochistan Earthquake paper. Containing the ascending and descending InSAR results processing by MintPy, and the processed observation and input files for BEAT.
DOI: 10.25345/c5ff3m140
title: MassIVE Reanalysis RMSV000000354.4900 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CCDC151 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c59p2w70v
title: MassIVE Reanalysis RMSV000000354.4894 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, IDI1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.6084/m9.figshare.19220496
title: Supplementary Material for: Definition and Diagnostic Criteria for Sarcopenic Obesity: ESPEN and EASO Consensus Statement

description: <b><i>Introduction:</i></b> Loss of skeletal muscle mass and function (sarcopenia) is common in individuals with obesity due to metabolic changes associated with a sedentary lifestyle, adipose tissue derangements, comorbidities (acute and chronic diseases) and during the ageing process. Co-existence of excess adiposity and low muscle mass/function is referred to as sarcopenic obesity (SO), a condition increasingly recognized for its clinical and functional features that negatively influence important patient-centred outcomes. Effective prevention and treatment strategies for SO are urgently needed, but efforts are hampered by the lack of a universally established SO definition and diagnostic criteria. Resulting inconsistencies in the literature also negatively affect the ability to define prevalence as well as clinical relevance of SO for negative health outcomes. <b><i>Aims and Methods:</i></b> The European Society for Clinical Nutrition and Metabolism (ESPEN) and the European Association for the Study of Obesity (EASO) launched an initiative to reach expert consensus on a definition and diagnostic criteria for SO. The jointly appointed international expert panel proposes that SO is defined as the co-existence of excess adiposity and low muscle mass/function. The diagnosis of SO should be considered in at-risk individuals who screen positive for a co-occurring elevated body mass index or waist circumference, and markers of low skeletal muscle mass and function (risk factors, clinical symptoms, or validated questionnaires). Diagnostic procedures should initially include assessment of skeletal muscle function, followed by assessment of body composition where presence of excess adiposity and low skeletal muscle mass or related body compartments confirm the diagnosis of SO. Individuals with SO should be further stratified into stage I in the absence of clinical complications or stage II if cases are associated with complications linked to altered body composition or skeletal muscle dysfunction. <b><i>Conclusions:</i></b> ESPEN and EASO, as well as the expert international panel, advocate that the proposed SO definition and diagnostic criteria be implemented into routine clinical practice. The panel also encourages prospective studies in addition to secondary analysis of existing data sets, to study the predictive value, treatment efficacy and clinical impact of this SO definition.
DOI: 10.48370/ofd/xdvn1d/3ftwkd
title: Opiętek zielony (Agrilus viridis).JPG

description: :unav
DOI: 10.48370/ofd/xdvn1d
title: Opiętek zielony (Agrilus viridis (Linnaeus, 1758)), C-333

description: Coleoptera collection
DOI: 10.25345/c55x25d7z
title: MassIVE Reanalysis RMSV000000354.4902 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CRNN [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5280506v
title: MassIVE Reanalysis RMSV000000354.4904 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, DDX19B [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.6084/m9.figshare.19220518.v1
title: Additional file 11 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 11: Table S10. Blat results of NHIP in vertebrates.
DOI: 10.6084/m9.figshare.19220515
title: Additional file 10 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 10: Table S9. 22q13.33 comethylated block adjusted for nominal covariates (birth weight, nRBC).
DOI: 10.6084/m9.figshare.19220515.v1
title: Additional file 10 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 10: Table S9. 22q13.33 comethylated block adjusted for nominal covariates (birth weight, nRBC).
DOI: 10.6084/m9.figshare.19220518
title: Additional file 11 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 11: Table S10. Blat results of NHIP in vertebrates.
DOI: 10.6084/m9.figshare.19220521
title: Additional file 12 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 12: Table S11. Plasmid structure for HEK293T cells and NHIP peptide sequence.
DOI: 10.6084/m9.figshare.19220521.v1
title: Additional file 12 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 12: Table S11. Plasmid structure for HEK293T cells and NHIP peptide sequence.
DOI: 10.6084/m9.figshare.19220527.v1
title: Additional file 14 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 14: Table S13. Insertion characteristics in the discovery group and primers.
DOI: 10.6084/m9.figshare.19220524
title: Additional file 13 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 13: Table S12. NHIP peptide blat research results.
DOI: 10.6084/m9.figshare.19220527
title: Additional file 14 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 14: Table S13. Insertion characteristics in the discovery group and primers.
DOI: 10.6084/m9.figshare.19220524.v1
title: Additional file 13 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 13: Table S12. NHIP peptide blat research results.
DOI: 10.6084/m9.figshare.19220530
title: Additional file 15 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 15: Table S14. PRS was tested for association on 22q13.33 comethylated block % methylation or diagnosis.
DOI: 10.6084/m9.figshare.19220530.v1
title: Additional file 15 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 15: Table S14. PRS was tested for association on 22q13.33 comethylated block % methylation or diagnosis.
DOI: 10.6084/m9.figshare.19220533
title: Additional file 16 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 16: Table S15. Subject characteristics of postmortem brain samples.
DOI: 10.6084/m9.figshare.19220533.v1
title: Additional file 16 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 16: Table S15. Subject characteristics of postmortem brain samples.
DOI: 10.6084/m9.figshare.19220536.v1
title: Additional file 17 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 17: Table S16. Differential gene expression associated with NHIP in brain.
DOI: 10.6084/m9.figshare.19220539.v1
title: Additional file 18 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 18: Table S17. Differential gene expression associated with NHIP in brain, after adjustment for covariates.
DOI: 10.6084/m9.figshare.19220542
title: Additional file 19 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 19: Table S18. Gene ontology analysis on differentially expressed genes (FDR corrected p-value
DOI: 10.6084/m9.figshare.19220542.v1
title: Additional file 19 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 19: Table S18. Gene ontology analysis on differentially expressed genes (FDR corrected p-value
DOI: 10.6084/m9.figshare.19220545
title: Additional file 1 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 1: Table S1. Subject characteristics in relation to outcomes at 36 months.
DOI: 10.6084/m9.figshare.19220545.v1
title: Additional file 1 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 1: Table S1. Subject characteristics in relation to outcomes at 36 months.
DOI: 10.6084/m9.figshare.19220536
title: Additional file 17 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 17: Table S16. Differential gene expression associated with NHIP in brain.
DOI: 10.6084/m9.figshare.19220539
title: Additional file 18 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 18: Table S17. Differential gene expression associated with NHIP in brain, after adjustment for covariates.
DOI: 10.6084/m9.figshare.19220548.v1
title: Additional file 20 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 20: Table S19. Genes in common between DGE in brain and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220551
title: Additional file 21 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 21: Table S20. Gene ontology analysis on overlapped genes between DGE in brain and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220548
title: Additional file 20 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 20: Table S19. Genes in common between DGE in brain and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220554
title: Additional file 22 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 22: Table S21. Differential gene expression with overexpressed NHIP in HEK293T cells.
DOI: 10.6084/m9.figshare.19220554.v1
title: Additional file 22 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 22: Table S21. Differential gene expression with overexpressed NHIP in HEK293T cells.
DOI: 10.6084/m9.figshare.19220560
title: Additional file 24 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 24: Table S23. KEGG pathway enrichment of differentially expressed genes (FDR corrected p-value
DOI: 10.6084/m9.figshare.19220560.v1
title: Additional file 24 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 24: Table S23. KEGG pathway enrichment of differentially expressed genes (FDR corrected p-value
DOI: 10.6084/m9.figshare.19220551.v1
title: Additional file 21 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 21: Table S20. Gene ontology analysis on overlapped genes between DGE in brain and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220557
title: Additional file 23 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 23: Table S22. Gene ontology analysis of differentially expressed genes (FDR corrected p-value
DOI: 10.6084/m9.figshare.19220557.v1
title: Additional file 23 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 23: Table S22. Gene ontology analysis of differentially expressed genes (FDR corrected p-value
DOI: 10.6084/m9.figshare.19220563.v1
title: Additional file 25 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 25: Table S24. Genes in common between DGE in brain and DGE in cells.
DOI: 10.6084/m9.figshare.19220563
title: Additional file 25 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 25: Table S24. Genes in common between DGE in brain and DGE in cells.
DOI: 10.6084/m9.figshare.19220566
title: Additional file 26 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 26: Table S25. Gene ontology analysis on the overlapped genes between DGE in brain and DGE in cells.
DOI: 10.6084/m9.figshare.19220566.v1
title: Additional file 26 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 26: Table S25. Gene ontology analysis on the overlapped genes between DGE in brain and DGE in cells.
DOI: 10.6084/m9.figshare.19220569
title: Additional file 27 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 27: Table S26. Gene ontology in common between significant gene ontology terms for brain DGE and significant terms for cell DGE.
DOI: 10.6084/m9.figshare.19220569.v1
title: Additional file 27 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 27: Table S26. Gene ontology in common between significant gene ontology terms for brain DGE and significant terms for cell DGE.
DOI: 10.6084/m9.figshare.19220572
title: Additional file 28 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 28: Table S27. Genes in common between DGE in brain and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220572.v1
title: Additional file 28 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 28: Table S27. Genes in common between DGE in brain and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220575
title: Additional file 29 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 29: Table S28. Gene ontology analysis on the overlapped genes between DGE in cells and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220578
title: Additional file 2 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 2: Table S2.. Subject characteristics by subject.
DOI: 10.6084/m9.figshare.19220581
title: Additional file 30 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 30: Table S29. Genes in common among DGE in brain, DGE in cells, and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220575.v1
title: Additional file 29 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 29: Table S28. Gene ontology analysis on the overlapped genes between DGE in cells and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220578.v1
title: Additional file 2 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 2: Table S2.. Subject characteristics by subject.
DOI: 10.6084/m9.figshare.19220581.v1
title: Additional file 30 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 30: Table S29. Genes in common among DGE in brain, DGE in cells, and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220584
title: Additional file 31 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 31: Table S30. Gene ontology analysis on the overlapped genes among DGE in brain, DGE in cells, and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220593
title: Additional file 4 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 4: Table S3. ASD DMRs identified in discovery group with annotations.
DOI: 10.6084/m9.figshare.19220584.v1
title: Additional file 31 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 31: Table S30. Gene ontology analysis on the overlapped genes among DGE in brain, DGE in cells, and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220593.v1
title: Additional file 4 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 4: Table S3. ASD DMRs identified in discovery group with annotations.
DOI: 10.6084/m9.figshare.19220596.v1
title: Additional file 5 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 5: Table S4.. ChromHMM-defined chromatin state enrichment for DMRs.
DOI: 10.6084/m9.figshare.19220596
title: Additional file 5 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 5: Table S4.. ChromHMM-defined chromatin state enrichment for DMRs.
DOI: 10.6084/m9.figshare.19220602
title: Additional file 7 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 7: Table S6. Genes in common between DMRs associated genes and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220599.v1
title: Additional file 6 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 6: Table S5. Transcription factor motif enrichment for DMRs.
DOI: 10.6084/m9.figshare.19220602.v1
title: Additional file 7 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 7: Table S6. Genes in common between DMRs associated genes and SFARI ASD genes.
DOI: 10.6084/m9.figshare.19220605
title: Additional file 8 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 8: Table S7. Gene Ontology terms on ASD DMRs.
DOI: 10.6084/m9.figshare.19220599
title: Additional file 6 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 6: Table S5. Transcription factor motif enrichment for DMRs.
DOI: 10.6084/m9.figshare.19220605.v1
title: Additional file 8 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 8: Table S7. Gene Ontology terms on ASD DMRs.
DOI: 10.6084/m9.figshare.19220608
title: Additional file 9 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 9: Table S8. 22q13.33 comethylated block replicates with independent studies, and sequencing platforms.
DOI: 10.6084/m9.figshare.19220608.v1
title: Additional file 9 of Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

description: Additional file 9: Table S8. 22q13.33 comethylated block replicates with independent studies, and sequencing platforms.
DOI: 10.6084/m9.figshare.19220623
title: Additional file 11 of Whole-genome analyses reveal a novel prophage and cgSNPs-derived sublineages of Brachyspira hyodysenteriae ST196

description: Additional file 11: Alignment scores of B. hyodysenteriae ST196 isolates obtained with Snippy.
DOI: 10.6084/m9.figshare.19220623.v1
title: Additional file 11 of Whole-genome analyses reveal a novel prophage and cgSNPs-derived sublineages of Brachyspira hyodysenteriae ST196

description: Additional file 11: Alignment scores of B. hyodysenteriae ST196 isolates obtained with Snippy.