cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/gmwz4sy8md
title: Transcripts for HCV knowledge paper

description: This data is a set of semi-structured interviews at SEP to evaluate the HCK knowledge of current young people who inject drugs in suburban NJ.
DOI: 10.17632/rs6mwk8sp2
title: Dataset - Preference-based automatic shading control in a shared space: The case of Venetian Blinds

description: The following data set contains two main folders:
- VenetianBlindsDecentralizedControl: This folder contains the annual simulations of 64 shading positions in which the slat angles are controlled in a decentralized mechanism. Please refer to the paper for more information. 
- RepresentativeResults: This folder contains the control performance for selected weeks of four months for both cut-off and the proposed control scenarios.
DOI: 10.17632/ftjzdhxd97
title: LDHU3_01.0930

description: Mitochondrial processome subunit 5 | MPSS5; Leishmania donovani
DOI: 10.17632/r74htgzh2s
title: Posttranslational regulation of the exon skipping machinery controls aberrant splicing in leukemia

description: The unprocessed ("raw") and/or processed data deposited here correspond to the Cancer Discovery paper with the same title (see PMID: 32444465. DOI: 10.1158/2159-8290.CD-19-1436). For the code used in data analysis please see github: https://github.com/NtziachristosLab/SRSF6_T-ALL_CD All the sequencing data are deposited in Gene Expression Omnibus (GEO, GSE139622). All proteomics data are deposited in MassIVE (MSV000084383). For details on methods and how to reproduce the studies please see the methods section on the corresponding manuscript (PMID: 32444465. DOI: 10.1158/2159-8290.CD-19-1436) and/or contact the authors directly. Corresponding author: Panos Ntziachristos, pntziachr@gmail.com. Here we present an alternative mechanism for splicing regulation in T-cell acute lymphoblastic leukemia (T-ALL) that involves posttranslational stabilization of the splicing machinery via deubiquitination. We demonstrate there are extensive exon skipping changes in disease, affecting proteasomal subunits, cell-cycle regulators, and the RNA machinery. We present that the serine/arginine-rich splicing factors (SRSF), controlling exon skipping, are critical for leukemia cell survival. The ubiquitin-specific peptidase 7 (USP7) regulates SRSF6 protein levels via active deubiquitination, and USP7 inhibition alters the exon skipping pattern and blocks T-ALL growth. The splicing inhibitor H3B-8800 affects splicing of proteasomal transcripts and proteasome activity and acts synergistically with proteasome inhibitors in inhibiting T-ALL growth. Our study provides the proof-of-principle for regulation of splicing factors via deubiquitination and suggests new therapeutic modalities in T-ALL. SIGNIFICANCE: Our study provides a new proof-of-principle for posttranslational regulation of splicing factors independently of mutations in aggressive T-cell leukemia. It further suggests a new drug combination of splicing and proteasomal inhibitors, a concept that might apply to other diseases with or without mutations affecting the splicing machinery.
DOI: 10.17632/6trc3pxsnj
title: LINF_200013600

description: ATP-dependent DEAD/H RNA helicase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/jy6gxf7r5z
title: PCNA and cell cycle - single-cell features

description: Data in the paper "Cellular state landscape and herpes simplex virus type 1 infection progression are connected" by Pietilä et al., 2023:
- Single-cell nuclear mean intensity of PCNA and cellular mean and sum intensities of ICP4 and ICP27 in HeLa, A549 and BJ cells as well as cell size and cell-cycle classification
- A549_PCNA_ICP27.csv (Supplementary Figure 4a, 4d, 5b, and 5d)
- A549_PCNA_ICP4.csv (Supplementary Figure 5b,d)
- BJ_PCNA_ICP27.csv (Supplementary Figure 4a,e)
- HeLa_secondReplicate_PCNA_ICP27.csv (Supplementary Figure 4a, 4c, 5a, and 5c)
- HeLa_secondReplicate_PCNA_ICP4.csv (Supplementary Figure 5a,c)

Cells were infected with HSV-1, and after fixation markers were detected by immunofluorescence imaging. Cells from HSV-1-infected wells were classified into uninfected and infected cells (indicated by “classification_infection”) as described in the paper. Single-cell features are provided as normalised background-subtracted mean or sum intensity values for the nucleus or cell. Data cleanup, background subtraction and normalisation of the intensity values were applied as described in the paper. Experimental conditions are in triplicate (indicated by “well_name”).
DOI: 10.17632/n48kv8ssy9
title: EO and O ceramides, TEWL in atopic dermatitis stratum corneum

description: The quantitative amounts of all bound O ceramides and EO ceramides in stratum corneum samples from healthy volunteers and atopic dermatitis patient. Data are quantified by LC/MS and corrected for the SQ-value (amount on tapes used to acquire the sample). The amount for each ceramide is given per volunteer. Ceramides are indicated per subclass and chain length, unsaturation is indicated by (:1).
DOI: 10.17632/dmzhyn59ny
title: Data for: Surface morphology evolution of a polycrystalline diamond by inductively coupled plasma reactive ion etching (ICP-RIE)

description: XRD spectra of the original and O2 plasma etched PCD2. After etching at RFP of 100W, I&lt;111&gt;/&lt;110&gt;, which is the peak intensity ratio of the &lt;111&gt; and &lt;110&gt; orientation, decreases from 0.904 to 0.332. This demonstrates that the &lt;111&gt; crystal orientation of etched PCD exhibits weaker intensity and becomes less dominant in XRD diffraction content after etching. This was due to preferential etching /oxidation of the &lt;111&gt; orientation compared with other crystal orientations, which agrees with existing literature. However, after subsequent etching at RFP of 400W, I&lt;111&gt;/&lt;110&gt; decreases slightly from 0.332 to 0.235. This minor change occurred owing to the dominant role of ion-bombardment enhanced etching when the RFP was as high as 400W, which surpassed the reactive selective etching on crystal orientations.
DOI: 10.17632/dn4pywsrz2
title: Data for: Simulated green turtle grazing affects benthic infauna abundance and community composition but not diversity in a Thalassia testudinum seagrass meadow

description: This data set contains raw abundance data for individual benthic infaunal groups from all sampling time points and both experimental (clipped) and reference (unclipped) treatments. Accompanying explanatory information and variable units are also included. Please contact the corresponding author of the associated manuscript with any questions.
DOI: 10.17632/dh2pdkby89
title: Rines et al Animal Behaviour A22-00399 raw data

description: Data from two experiments, one in which we assessed the effects of accessory gland proteins and mating, with or without the consumption of the spermatophylax, on sexual receptivity and post-copulatory behavior of female crickets, and another in which we quantified the effects of accessory gland protein injection and spermatophylax consumption on female oviposition behavior. The data for the two experiments are in two Excel files, and a key to the variable names are contained in the readme files.
DOI: 10.17632/4pv52f45cy
title: Mechanosensitive turnover of phosphoribosyl pyrophosphate synthetases regulates nucleotide metabolism

description: MS data
DOI: 10.17632/nr9sx8by4f
title: Di- and tri-methylation of histone H3K36 play distinct roles in different DNA double-strand break repair pathways

description: 16 excel file including original image data and digital data in each figure.
DOI: 10.17632/yy4h8c5yjt
title: LINF_070015300

description: mucolipin-like | lmmlA; Leishmania infantum
DOI: 10.17632/3vdwrct5r3
title: Analyzing the Indian Tobacco Sector: Pre-Pandemic and Immediate After-Pandemic Perspectives.

description: India ranks second in the world for tobacco consumption. During 2019-2020, cigarette consumption increased, and the illegal cigarette trade surged during the pandemic. The tobacco industry has significantly contributed to India's economy, and during the lockdown, the price of ten cigarettes soared to 300 INR and beyond.Since 1975, it has been a legal requirement to display a statutory warning that smoking is injurious to health. The government introduced new regulations mandating that tobacco products display written messages and pictographic representations indicating that smoking or consuming tobacco causes cancer. Despite these warnings, the tobacco industry thrives in India, where the tobacco leaf is referred to as the "golden leaf." Smoking is harmful to health, causes cancer, and weakens the immune system, making individuals more susceptible to pandemic and other infections. Despite these risks, tobacco has not been banned.The tobacco business has been booming for years. The pandemic-induced price hikes have led to a surge in smuggling, with tax-evaded cigarettes now comprising as much as one-fourth of India's cigarette industry. The possibility of a new COVID-19 strain causing another lockdown raises concerns about future smuggling activities. Based on current smuggling data, it is evident that opportunistic businesses are likely preparing inventories for any potential upcoming lockdown.
DOI: 10.17632/zsxjwdvh95
title: burn fat

description: burn fat for healthy life
DOI: 10.17632/rm997fkws8
title: A Comparative Investigation of Similarities and Differences in the Aesthetic Theories of Stieglitz, Weston, Adams, and White

description: My Master's Thesis comparing the Aesthetic Theories of the four great photographers, Alfred Stieglitz, Edward Weston, Ansel Adams, and Minor White. My thesis describes the theories of these photographers and points out similarities and differences in their theories. Most published works on these photographers, especially those on Minor White, show their work and biographical information. I wanted to present their aesthetic theories--particularly those pertaining to the making and understanding of their photographs.
DOI: 10.17632/zm93wy6r2r
title: Expression data biopsies and cells

description: Thirty-two healthy volunteers (15 men and 17 women) with a median age of 25, range (18 – 44), BMI 24.5 (18.3 – 18.8), waist/hip ratio 0.8 (0.4 – 1.2) and total body fat percentage 28.6 (8.3 -50.1 ) were included in the study. Two individuals were excluded following baseline examinations due to coagulation factors outside the normal range, and in three participants no biopsy could be obtained, due to insufficient fat in the region, evaluated by ultrasound. Two participants had two biopsies obtained on separate days, to be used for both tissue mRNA analyses and cell cultures. Thus, 58 biopsies were obtained from 27 subjects all together. 38 biopsies were snap-frozen in liquid nitrogen to be used for mRNA analyses, whereas 10 were utilized for pre-adipocyte isolation. In the uploaded data set, all subjects are anonymized. BAT refers to Brown Adipose Tissue and WAT refers to White adipose Tissue. Data are raw CT values. For the cell dataset, control and norepinephrine stimulated cells are specified.
DOI: 10.17632/h44hg6czzg
title: MC-TESTER: a universal tool for comparisons of Monte Carlo predictions for particle decays in high energy physics

description: Abstract Theoretical predictions in high energy physics are routinely provided in the form of Monte Carlo generators. Comparisons of predictions from different programs and/or different initialization set-ups are often necessary. MC-TESTER can be used for such tests of decays of intermediate states (particles or resonances) in a semi-automated way. Our test consists of two steps. Different Monte Carlo programs are run; events with decays of a chosen particle are searched, decay trees are analyzed and ... Title of program: MC-TESTER version 1.1 Catalogue Id: ADSM_v1_0 Nature of problem The decays of individual particles are well defined modules of a typical Monte Carlo program chain in high energy physics. A fast semi-automatic way of comparing results from different programs is often desirable, for the development of new programs, to check correctness of the installations or for discussion of uncertainties. Versions of this program held in the CPC repository in Mendeley Data ADSM_v1_0; MC-TESTER version 1.1; 10.1016/S0010-4655(03)00466-1 ADSM_v2_0; MC-TESTER, version 1.23 and version 1.24.4; 10.1016/j.cpc.2010.11.023 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/55bkfhg892
title: Preliminary analysis of COVID-19 academic information patterns: A call for open science in the times of closed borders

description: Accompanying data used in the article "Preliminary analysis of COVID-19 academic information patterns: A call for open science in the times of closed borders" by Homolak J, Kodvanj I, Virag D. For more information and final output, see full article and code comments. Link to the preprint: https://www.preprints.org/manuscript/202003.0443/v2 Link to GitHub Data and Code repository: https://github.com/davorvr/covid-academic-pattern-analysis-v2
DOI: 10.17632/xb8mkbxjyk
title: Data from: Learning performance is associated with social preferences in a group-living fish

description: Many animals live in groups yet grouping tendencies and preferences for groups of different sizes vary considerably between individuals. This variation reflects, at least in part, differences in how individuals evaluate and perceive their physical surroundings and their social environment. While such differences are likely related to individual variation in cognition, there have been few studies that have directly investigated how cognitive abilities are linked to individual grouping decisions. Therefore, in this study we assessed whether performance on a foraging-based reversal learning task is related to grouping preferences (a group of three fish versus a single fish) in a group-living cichlid fish, Neolamprologus pulcher. While most fish preferred to associate with the group over a single fish, individuals that completed the learning task the quickest were the least interested in the group under elevated predation risk. In addition, fish that quickly completed the reversal learning task also adjusted their grouping preferences the most when predation risk increased suggesting that the observed relationship between learning performance and grouping decisions may be linked to individual differences in behavioural flexibility. Overall, our results offer valuable insight into the potential factors that underlie interindividual variation in grouping decisions.
DOI: 10.17632/g5zy8fdwkk
title: Data for: Prediction of apparent permeability of porous media based on a modified lattice Boltzmann method
DOI: 10.17632/8sm35p2zch
title: Data for: Impact of noble-gas filler atoms on the lattice thermal conductivity of CoSb3 skutterudites - first-principles modelling

description: This repository provides additional data to accompany the paper:

"Impact of noble-gas filler atoms on the lattice thermal conductivity of CoSb3 skutterudites: first-principles modelling"

J. Tang and J. M. Skelton
Journal of Physics: Condensed Matter 33, 164002 (2021), DOI: 10.1088/1361-648X/abd8b8

This article examines the structural dynamics and thermal transport of pristine CoSb3 and a series of noble gas-filled XCo8Sb24 models (X = He, Ne, Ar, Kr, Xe). This repository makes available a full set of data from these calculations, including:

* Optimised structures;
* Harmonic lattice-dynamics calculations;
* Thermal conductivity calculations performed within the single-mode relaxation-time approximation; and
* Additional data from analyses including unfolded band structures and an exploration of the effects of mass and force constants on the structural dynamics and transport.

The repository also contains sample input files for the Vienna Ab initio Simulation Package (VASP) code.

For details of how this data was generated, users are referred to the published article and supporting information. Brief details of file formats and links to further documentation are given in the included README file.
DOI: 10.17632/sr2nt99xmw
title: Human dimensions and ecological success of CAMPFIRE in Zimbabwe.

description: Conserving natural resources outside protected areas has its own challenges. Participation and acceptance play an important role in CBNRM. The following hypotheses were tested (a) attitudes and perceptions of the respondents’ towards wildlife vary with selected socio-economic variables, b) satisfaction derived from CAMPFIRE benefits has an influence on attitudes and perceptions of respondents’ and (c) respondents’ attitudes and perceptions vary with distance to the Park boundary. The study employed a questionnaire and participatory research tools such as Key Informant Interviews, one-to-one informal discussions and participant observation. The main findings showed that depending on respondents’ background and distance from the park boundary, they faced different wildlife-related problems and had different views about CAMPFIRE’s success. Accountability and monitoring would be a crucial prerequisite for ecological success.
DOI: 10.17632/46z6k8kr4v
title: Spatial Covid-19 assessment in Mashhad city

description: Spatial Covid-19 assessment in Mashhad city
DOI: 10.17632/vdhdnbdt8w
title: Engineering geological data

description: 1-Field and thin section photos
2-Draw of geological cross section map
3-Logging chart
DOI: 10.17632/xdjfrscp8w
title: Trial 1

description: This is a trial run
DOI: 10.17632/9ptrdcvvzz
title: System development and environmental performance analysis of textile envelope integrated flexible photovoltaic using life cycle assessment approach

description: The textile envelope integrated flexible photovoltaic (TE-FPV) system is an emerging technology to promote building sustainability due to its lightweight structure, textile recovery easily, and renewable energy production. We develop six TE-FPV prototypes to determine its advantages of environmental performance. Especially, the systems with the solar cells directly printed on the textile are designed to show the promising sustainability prospect. A cradle-to-cradle life cycle assessment is conducted, and the results are compared to traditional building integrated photovoltaic (BIPV) technologies. The life cycle inventories of some textiles and solar cells are the first time to be developed. Based on the inventories, life cycle impact assessment is implemented to figure out various environmental impact categories. Furthermore, uncertainty analyses and sensitivity analyses are performed to unmask the effects of parameters on the fluctuation of environmental indicators. The results present that most of TE-FPV systems perform more sustainable and more recyclable over the traditional BIPV systems. The organic solar cell is unfavorable for the TE-FPV systems due to its low power conversion efficiency and short lifespan. ETFE envelope integrated perovskite solar cell systems show vast prospective potential in environmental performances. This work contributes significantly required environmental quantifications to promote the advancement of TE-FPV systems.
DOI: 10.17632/g9h29v6cdc
title: Parasitic resistances estimation method (MATLAB codes and SCAPS files)

description: This data contains the MATLAB codes for implementing a new method for estimating the values of the parasitic resistances based on experimental data of a planar perovskite solar cell and SCAPS simulation data for validation of it.
DOI: 10.17632/jfx2zw833j
title: dataset1

description: Data set for EPO and employee retention
DOI: 10.17632/9883mb5fdb
title: Crustal and mantle Hg isotopic stratification beneath cratons: Implications for the deep Hg cycle

description: The dataset includes Mercury isotopic and elemental compositions of the deep-seated xenoliths from East China in Table 1.
DOI: 10.17632/srv2mzr3fc
title: Healthcare Professional experiences of making surgical oncology decisions and delivering COVID-19 safe care: a qualitative study

description: This dataset includes the verbatim transcriptions of interviews conducted to explore the experiences of healthcare professionals during COVID-19. it also includes the codebook created by the researches identifying key themes.
DOI: 10.15468/dl.a5aq5w
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-141.22709 60.32117,-128.06066 59.27214,-136.96673 65.43789,-140.7775 65.58775,-141.22709 60.32117))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Aethes smeathmanniana (Fabricius, 1781)"
 ]
}

 The dataset includes 28 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051834-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/p6cvdv425b
title: Online teaching attitude and behavioral intention of college teachers

description: The OTE questionnaire was distributed through an online platform to facilitate responses from college teachers at all times and locations. We leveraged social media to promote the survey and expand the sample size. A total of 1,127 teachers completed the OTE questionnaire, but we excluded those who answered the questionnaire too quickly and those who chose the same option for all items. Ultimately, 1,102 valid data points were collected, resulting in a questionnaire validity rate of 97.8%.
DOI: 10.17632/cghz6t959n
title: Data sets for water parameters, chemical compositions, and isotopic compositions of the study area

description: Data sets for water parameters, chemical compositions, and isotopic compositions of the study area
DOI: 10.17632/3hzk95s37m
title: Data for: Bolometer measurements of the radiated power and estimates of the effective ion charge Z_eff on the Keda Torus eXperiment

description: The dataset is the research data of the article titled 'Bolometer measurements of the radiated power and estimates of the effective ion charge Z_eff on the Keda Torus eXperiment'.
DOI: 10.17632/zvv4fx3z48
title: Data in brief_Encapsulation of α-tocopherol in whey protein isolate/chitosan particles using oil-in-water emulsion with optimal stability and bioaccessibility

description: The file is a Data in Brief used by Xu et al study for developing an oil-in-water (O/W) emulsion using whey protein isolate (WPI)-chitosan (CN) complex to encapsulate α-tocopherol for a stable and good bioaccessible in vitro. The data showed that the emulsion exhibited a monomodal distribution (d = 803.3 ± 6.9 nm) with encapsulation rate of 86.3±2.3%. And they were stable under NaCl (0 -150 mmol/L), sugar (0 - 5 g/100 g), 55°C for 30 min, pH 5-6.5, even storage for 20 d at 4°C and 25°C. Furthermore, the data supported the WPI-CN complex could be used to achieve a controlled and sustainable release of liposoluble bioactive compounds from O/W emulsions during intestinal digestion.
DOI: 10.17632/38s9kz6z95
title: Validating the Challenges of Traditional Paper-Based Tendering in Ghana

description: Data used for conducting the research entitled "Validating the Challenges of Traditional Paper-Based Tendering in Ghana"
DOI: 10.17632/x7jtrd6ndf
title: Study of double-sided silicon pixel ladders with low material budget

description: A double-sided silicon pixel ladder with extremely low material budget has been developed for the vertex detector of the CEPC. To validate the design and evaluate the performance of the double-sided ladder, a beam test was performed at IHEP with 1.3 GeV electrons. Here are the raw data (after decoding) for the double-sided ladder and a 4-layers silicon pixel telescope.
DOI: 10.17632/nh4pxzyzbt
title: Relictic populations of the endangered tree Moringa peregrina (Moringaceae) in Sinai, Egypt suffer from genetic isolation and inbreeding

description: These are supplementary figures, tables, and GenAlex outputs for the assessement of genetic diversity of Moringa peregrina tress in Sinai, Egypt using the SSR markers.