cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17192305
title: Metadata for Integrative RNA-Seq and Co-expression Analyses Uncover Confident sRNA Networks in Staphylococcus aureus Strains of the Brazilian ST239 and USA Lineages

description: Supplementary Tables S1–S5. Categorization of sRNA genomic localization across strains. Each table presents the classification of sRNAs according to their genomic annotation (antisense, intragenic, intergenic, 5′ UTR, and 3′ UTR). One table is provided per strain, except for USA500, whose annotation was propagated from USA300, according to the original study (Tomlinson, Malof and Shaw, 2021).

Supplementary Tables S6–S11. Differential gene expression (DEG) between biofilm and planktonic conditions. Tables list log2 fold changes (log2FC) for each strain, with positive values indicating higher expression in biofilm relative to planktonic growth.

Supplementary Table S12. Cross-lineage module assignment of genes from co-expression analysis. For each row, the table lists the locus IDs for Bmb9393 (ST239), N315 (USA100), MRSA252 (USA200), LAC (USA300/USA500), and MW2 (USA400); the final column reports the WGCNA module (color name) assigned to that locus. Entries include both CDSs and sRNAs; blank cells indicate that no ortholog was identified in the corresponding strain.

Supplementary Table S13. Hub genes identified within co-expression modules. For each strain, hub genes are listed along with their unique IDs, module membership, correlations of modules with biofilm/planktonic states, and, when available, gene product, protein ID, GO ID, and associated GO terms.

Supplementary Table S14. Gene Ontology (GO) enrichment of co-expression modules. GO terms associated with individual modules, highlighting biological functions enriched among the genes within each module.

Supplementary Table S15. High-confidence mRNA–sRNA interaction pairs. List of candidate regulatory pairs retained after all filtering steps (see Methods). Because of these filters—including cross-tool thresholds, WGCNA co-assignment, and cross-strain expression-consistency—not all antisense (cis) sRNA–CDS pairs were retained; antisense pairs that failed any criterion were excluded and therefore do not appear here.
DOI: 10.15468/dl.4u8xmj
title: Occurrence Download

description: A dataset containing 1184 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Monitoreo de la Fauna Silvestre con Capacitación y Certificación de Monitores Comunitarios en las Microrregiones Prioritarias para la Conectividad y Conservación de la Biodiversidad Agua Blanca, Cañón del Usumacinta, Sierra de Tabasco, *"
 ]
}

 The dataset includes 1184 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012991-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h4qca7
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia hispanica",
 "Country is Ecuador",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012988-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.afbdxj
title: Occurrence Download

description: A dataset containing 1967 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fototrampeo de sistemas cársticos en el municipio de El Peñón, Santander - Proyecto Colombia BIO"
 ]
}

 The dataset includes 1967 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012990-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2aj4sp
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia hispanica",
 "Country is Italy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 35 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012989-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7qp97w
title: Occurrence Download

description: A dataset containing 648 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia hispanica",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 648 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012987-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30203417
title: Effect of forward masking on auditory brainstem response in individuals with tinnitus

description: To examine the impact of forward masking (FM), both on-frequency and off-frequency, on low (0.5 kHz), mid (1 & 2 kHz), and high-frequency (4 kHz) probe stimuli in Auditory brainstem response (ABR) test for individuals with tinnitus. The experimental design followed a standard group comparison research, where ABR was acquired across three experimental conditions: unmasked, off-frequency FM, and on-frequency FM. Thirty participants with tinnitus and 30 without tinnitus were recruited. The between-group comparison showed that the tinnitus group exhibited a longer wave V peak absolute latency and smaller response amplitude than controls for unmasked conditions. However, when the masker was introduced in both FM conditions, the tinnitus group tended to have an unidentifiable wave V peak response, which was significant at higher masker intensities. The altered ABR in the tinnitus group under FM conditions could suggest altered neural synchrony and reduce nerve fiber firing at the subcor tical level in individuals with tinnitus.
DOI: 10.6084/m9.figshare.30203417.v1
title: Effect of forward masking on auditory brainstem response in individuals with tinnitus

description: To examine the impact of forward masking (FM), both on-frequency and off-frequency, on low (0.5 kHz), mid (1 & 2 kHz), and high-frequency (4 kHz) probe stimuli in Auditory brainstem response (ABR) test for individuals with tinnitus. The experimental design followed a standard group comparison research, where ABR was acquired across three experimental conditions: unmasked, off-frequency FM, and on-frequency FM. Thirty participants with tinnitus and 30 without tinnitus were recruited. The between-group comparison showed that the tinnitus group exhibited a longer wave V peak absolute latency and smaller response amplitude than controls for unmasked conditions. However, when the masker was introduced in both FM conditions, the tinnitus group tended to have an unidentifiable wave V peak response, which was significant at higher masker intensities. The altered ABR in the tinnitus group under FM conditions could suggest altered neural synchrony and reduce nerve fiber firing at the subcor tical level in individuals with tinnitus.
DOI: 10.15468/dl.9hzvaa
title: Occurrence Download

description: A dataset containing 4528 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Acacia farnesiana"
 ]
}

 The dataset includes 4528 records from 292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012992-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mur8ps
title: Occurrence Download

description: A dataset containing 2110 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The results of bird censuses in the zonal landscapes of southern Ukraine in the winter of 2001"
 ]
}

 The dataset includes 2110 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012993-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z7q8nk
title: Occurrence Download

description: A dataset containing 2042 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is University of Minnesota Insect Collection",
 "TaxonKey is Bombus impatiens"
 ]
}

 The dataset includes 2042 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012994-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2g9rwh
title: Occurrence Download

description: A dataset containing 775 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia hispanica",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 775 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012995-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6t258p
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia hispanica",
 "Country is Seychelles",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012996-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z4vu8z
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia hispanica",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 227 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012997-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eser32
title: Occurrence Download

description: A dataset containing 1311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Castilla elastica",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1311 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012999-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.guhsjb
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia nemorosa",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 85 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013004-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zemhka
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Congo, Democratic Republic of the",
 "DatasetKey is one of (Rapid Assessment Program (RAP) Biodiversity Survey Database, Meise Botanic Garden Herbarium (BR), Biodiversity assessment in the Yangambi Biosphere Reserve, African Plants - a photo guide, iNaturalist Research-grade Observations)",
 "License is one of (Pending, Incompatible, CC0 1.0, CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Myrianthus arboreus",
 "Year 2000-2025"
 ]
}

 The dataset includes 25 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013001-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.36700.24969
title: Geologia do Ceará - Suíte Messejana
DOI: 10.15468/dl.dshmyb
title: Occurrence Download

description: A dataset containing 413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia nemorosa",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 413 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013002-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p9rmzd
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia nemorosa",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013003-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vz78jn
title: Occurrence Download

description: A dataset containing 13489 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Casuarina cunninghamiana",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 13489 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013005-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25824/redu/2thgdr
title: LIDS cat parasites

description: A dataset containing 1050 images of fields from microscope slides of fecal exams, containing eggs from 3 species of cat parasites, being: 1 - Ancylostoma spp. 2 - Cystoisospora spp. 3 - Platynosomum spp.
DOI: 10.5066/p9hxm2tw
title: Endophytic fungi and bacteria found in leaves of Phragmites australis from the east coast of North America

description: The data records DNA barcode sequences and species level identifications of fungi and bacteria that were isolated from Phragmites australis leaves collected in along the east coast of North America. These samples were collected in 2015 from populations of native and non-native Phragmites by collaborators at Louisiana State University from plants that were visibly diseased and visibly healthy. Sites were chosen to represent a latitudinal gradient, so paired samples were collected from populations of each lineage in the same latitudinal vicinity from Maine on the north end to Florida in the south and over to Louisiana in the Gulf of Mexico. The purpose of these collections was to determine the fungal endophytes associated with native and non-native lineages of Phragmites and determine whether each lineage was impacted by a similar or different assemblage of foliar fungi. Following field collections, leaves were surface sterilized and fungal cultures were propagated on growth medium from leaf punches. DNA was extracted from fungal isolates, PCR amplified and sequenced using Sanger sequencing. Sequences were used to identify taxa based on the UNITE database. All sequences were deposited into GenBank (NCBI) under accession numbers MT000583–MY000643
DOI: 10.15468/dl.7vrp9p
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Triatoma neotomae"
 ]
}

 The dataset includes 38 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013006-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30203413
title: Supplementary File 1 - Data used in Figures.xlsx

description: Data used in Figures.
DOI: 10.6084/m9.figshare.30203413.v1
title: Supplementary File 1 - Data used in Figures.xlsx

description: Data used in Figures.
DOI: 10.13140/rg.2.2.10171.27683
title: Geologia do Ceará - Formação Abaiara
DOI: 10.15468/dl.ndcfz6
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia nemorosa",
 "Country is Latvia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013011-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.94ym6a
title: Occurrence Download

description: A dataset containing 10152 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Sistematización de las colecciones científicas del Instituto de Historia Natural y Ecología, (IHNE) Chiapas"
 ]
}

 The dataset includes 10152 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013008-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xgjnw6
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia nemorosa",
 "Country is Estonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 30 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013009-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvz5g8
title: Occurrence Download

description: A dataset containing 237 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia nemorosa",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 237 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013010-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bvhdny
title: Occurrence Download

description: A dataset containing 1782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Living Specimen, Specimen, Material sample, Occurrence evidence)",
 "Continent is one of (South America, North America)",
 "Country is one of (Colombia, Brazil, Ecuador, Mexico, Costa Rica, Argentina, Puerto Rico, Panama, Nicaragua, Bolivia (Plurinational State of))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Sechium edule, Sechium edule edule, Sechium edule sylvestre)"
 ]
}

 The dataset includes 1782 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013007-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29822393
title: All data, R code, LPA fit indices, and profiles

description: These files contain measured variables before latent profile analysis, three files containing the code and output for the latent profile analyses (whole sample, females only, and males only), and well as the datasets with profiles form the best fitting, most theoretically useful model.<br>The data was used for repeated latent profile analyses to reveal and compare coping typologies. Analysis was run in the whole sample, then again with just the female participants and a third time with just the male participants. Profiles were tested for significant relationships to stress, psychological symptomatology, stress-related growth, gender, and race/ethnicity. The emergent profiles were compared between the three models. Files include the data that the LPAs were conducted on, R code and output for all 3 LPA, and data files that include profile membership and profile probabilities for the selected models.This data was collected for the Intraethnic and Interethnic Differences in Daily Stress and Coping study (see also Aldridge-Gerry et al., 2011 https://doi.org/10.15288/jsad.2011.72.125).
DOI: 10.6084/m9.figshare.29822393.v3
title: All data, R code, LPA fit indices, and profiles

description: These files contain measured variables before latent profile analysis, three files containing the code and output for the latent profile analyses (whole sample, females only, and males only), and well as the datasets with profiles form the best fitting, most theoretically useful model.<br>The data was used for repeated latent profile analyses to reveal and compare coping typologies. Analysis was run in the whole sample, then again with just the female participants and a third time with just the male participants. Profiles were tested for significant relationships to stress, psychological symptomatology, stress-related growth, gender, and race/ethnicity. The emergent profiles were compared between the three models. Files include the data that the LPAs were conducted on, R code and output for all 3 LPA, and data files that include profile membership and profile probabilities for the selected models.This data was collected for the Intraethnic and Interethnic Differences in Daily Stress and Coping study (see also Aldridge-Gerry et al., 2011 https://doi.org/10.15288/jsad.2011.72.125).
DOI: 10.6084/m9.figshare.29822393.v2
title: All data, R code, LPA fit indices, and profiles

description: These files contain measured variables before latent profile analysis, three files containing the code and output for the latent profile analyses (whole sample, females only, and males only), and well as the datasets with profiles form the best fitting, most theoretically useful model.<br>The data was used for repeated latent profile analyses to reveal and compare coping typologies. Analysis was run in the whole sample, then again with just the female participants and a third time with just the male participants. Profiles were tested for significant relationships to stress, psychological symptomatology, stress-related growth, gender, and race/ethnicity. The emergent profiles were compared between the three models. Files include the data that the LPAs were conducted on, R code and output for all 3 LPA, and data files that include profile membership and profile probabilities for the selected models.This data was collected for the Intraethnic and Interethnic Differences in Daily Stress and Coping study (see also Aldridge-Gerry et al., 2011 https://doi.org/10.15288/jsad.2011.72.125).
DOI: 10.15468/dl.unbxeh
title: Occurrence Download

description: A dataset containing 103096 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Senecio viscosus)"
 ]
}

 The dataset includes 103096 records from 705 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012975-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.