cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.8pk0p2nqw
title: Effects of temperature and wildflowers on survival and macronutrient stores of the alfalfa leafcutting bee under extended cold storage

description: Megachile rotundata (F.) is an important pollinator of alfalfa in the
 United States. Enhancing landscapes with wildflowers is a primary strategy
 for conserving pollinators and may improve sustainability of M. rotundata.
 Changing cold storage temperatures from a traditionally static thermal
 regime (STR) to a fluctuating thermal regime (FTR) improves overwintering
 success and extends M. rotundata’s shelf life and pollination window.
 Whether floral resources enhance overwintering survival and/or interact
 with thermal regime are unknown. With these data sets we tested the
 combined effects of enhancing alfalfa fields with wildflowers and thermal
 regime on survival and macronutrient stores under extended cold storage
 (i.e., beyond one season). Megachile rotundata adults were released in
 alfalfa plots with and without wildflower strips summer 2017. Completed
 nests were harvested in September 2017 and stored in STR. After a year,
 cells were randomly assigned to remain in STR for 6 months or in FTR for a
 year of extended cold storage; emergence rates were observed monthly.
 Macronutrient levels (i.e., sugars, glycogen, trehalose and total lipids)
 of newly emerged females were assessed. 
description: For methods see: Park et al. 2022. Effects of Temperature and
 Wildflower Strips on Survival and Macronutrient Stores of the Alfalfa
 Leafcutting Bee (Hymenoptera: Megachilidae) Under Extended Cold Storage.
 Environmental Entomology
DOI: 10.5061/dryad.gf1vhhmsp
title: Tropical tree species differ in damage and mortality from lightning

description: Lightning is an important agent of mortality for large tropical trees with
 implications for tree demography and forest carbon budgets. We evaluated
 interspecific differences in susceptibility to lightning damage using a
 unique dataset of systematically located lightning strikes on Barro
 Colorado Island, Panama. We measured differences in mortality among trees
 damaged by lightning and related those to damage frequency and tree
 functional traits. Eighteen of 30 focal species had lightning mortality
 rates that deviated from null expectations. Several species showed little
 damage and 3 species had no mortality from lightning, whereas palms were
 especially likely to die from strikes. Species that were most likely to be
 struck also showed the highest survival. Interspecific differences in tree
 tolerance to lightning suggest that lightning-caused mortality shapes
 compositional dynamics over time and space. Shifts in lightning frequency
 due to climatic change are likely to alter species composition and carbon
 cycling in tropical forests.
DOI: 10.5281/zenodo.18401124
title: Dataset for: Integrating a mobile fitness application into college physical education (PONE-D-25-66825)

description: This repository contains the de-identified underlying data for the manuscript “Integrating a mobile fitness application into college physical education: A quasi-experimental study among Chinese university students” (PLOS ONE; manuscript ID: PONE-D-25-66825). The study evaluated an app-supported extracurricular training model (Campus Sports World) compared with conventional college PE instruction using a quasi-experimental design with two intact classes.

The deposit includes two datasets and an accompanying codebook:





S1_Data_English.csv: Physical fitness test data collected at pre-test and post-test, including recorded performance and standardized test scores for endurance (800/1000 m), standing long jump, sit-and-reach, and 50 m sprint, as well as group assignment (Treatment vs. Control).




S2_Data_English.csv: Post-intervention exercise motivation questionnaire data collected in the Treatment group. Item responses are provided in their original Likert text categories and in numeric form (1–5) for analysis.




S1_S2_Codebook_English.xlsx: Variable definitions, units, coding rules, and notes to support replication of analyses reported in the manuscript.



All files are provided in English to facilitate reuse and verification. The datasets have been anonymized and contain no direct personal identifiers.
DOI: 10.5281/zenodo.18401125
title: Dataset for: Integrating a mobile fitness application into college physical education (PONE-D-25-66825)

description: This repository contains the de-identified underlying data for the manuscript “Integrating a mobile fitness application into college physical education: A quasi-experimental study among Chinese university students” (PLOS ONE; manuscript ID: PONE-D-25-66825). The study evaluated an app-supported extracurricular training model (Campus Sports World) compared with conventional college PE instruction using a quasi-experimental design with two intact classes.

The deposit includes two datasets and an accompanying codebook:





S1_Data_English.csv: Physical fitness test data collected at pre-test and post-test, including recorded performance and standardized test scores for endurance (800/1000 m), standing long jump, sit-and-reach, and 50 m sprint, as well as group assignment (Treatment vs. Control).




S2_Data_English.csv: Post-intervention exercise motivation questionnaire data collected in the Treatment group. Item responses are provided in their original Likert text categories and in numeric form (1–5) for analysis.




S1_S2_Codebook_English.xlsx: Variable definitions, units, coding rules, and notes to support replication of analyses reported in the manuscript.



All files are provided in English to facilitate reuse and verification. The datasets have been anonymized and contain no direct personal identifiers.
DOI: 10.5517/ccdc.csd.cc2qt06s
title: CCDC 2526475: Experimental Crystal Structure Determination

description: Related Article: Wu Lingli|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5061/dryad.fn2z34txn
title: Developmental changes in ciliary composition during gametogenesis in Chlamydomonas

description: Chlamydomonas reinhardtii transitions from mitotically dividing vegetative
 cells to sexually competent gametes of two distinct mating types following
 nutrient deprivation. Gametes of opposite mating type interact via their
 cilia, initiating an intraciliary signaling cascade and ultimately fuse
 forming diploid zygotes. The process of gametogenesis is genetically
 encoded and a previous study revealed numerous significant changes in mRNA
 abundance during this life cycle transition. Here we describe a proteomic
 analysis of cilia derived from vegetative and gametic cells of both mating
 types in an effort to assess the global changes that occur within the
 organelle during this process. We identify numerous membrane and/or
 matrix-associated proteins in gametic cilia that were not detected in
 cilia from vegetative cells. This includes the pro-protein from which the
 GATI-amide gametic chemotactic modulator derives, as well as receptors, a
 dynamin-related protein, ammonium transporters, two proteins potentially
 involved in the intraciliary signaling cascade-driven increase in cAMP,
 and multiple proteins with a variety of interaction domains. These changes
 in ciliary composition likely directly affect the functional properties of
 this organelle as the cell transitions between life cycle stages.
description: This is a Scaffold file and can be read using the free Scaffold
 viewer software (https://www.proteomesoftware.com/).
DOI: 10.5281/zenodo.18034694
title: Aegina site specific data

description: Site specific data for the pilot site of Aegina produced by the Laboratory of Photogrammetry of NTUA (depths, raster files, DEM, orthoimage, scanned maps).
DOI: 10.5281/zenodo.18034695
title: Aegina site specific data

description: Site specific data for the pilot site of Aegina produced by the Laboratory of Photogrammetry of NTUA (depths, raster files, DEM, orthoimage, scanned maps).
DOI: 10.15468/dl.v7rjk3
title: Occurrence Download

description: A dataset containing 2737 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eutypa lata"
 ]
}

 The dataset includes 2737 records from 154 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003172-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.fqz612jvs
title: Shield wall: Kelps are the last stand against corals in tropicalised reefs

description: Communities inhabiting biogeographic transition zones are shifting in
 composition as a result of progressive warming and heatwaves. In the
 marine environment, corals are expanding onto higher latitude reefs
 historically dominated by temperate kelp forests, initiating a shift
 towards warm-affinity coral dominated states. Although these coral
 expansions are a global phenomenon, the mechanisms that are underpinning
 the expansion process remain poorly understood, which limits the
 projections of the rate and extent of ecosystem reconfiguration. Here, we
 investigated the interaction between the kelp Ecklonia radiata and the
 high latitude scleractinian coral Plesiastrea versipora in several of
 Western Australia’s temperate reefs, where coral colony abundance has
 increased by 50% in recent years. Combining field surveys with field and
 laboratory experiments, we test the importance of physical (abrasion and
 light reduction) and chemical (allelopathic effects) effects of kelp
 canopies on coral tissue cover, photosynthetic parameters, and
 calcification rates. In the field, kelp cover had a negative effect on
 coral density that was overwhelming in comparison to other dominant
 macroalgal taxa. Abrasion by kelp whiplash was the predominant mechanism
 by which kelp exerted a negative effect on P. versipora fitness, scraping
 up to 80% of live coenosarc from experimental colonies. In contrast,
 canopies had no effects on P. versipora photochemical efficiency and
 laboratory incubations showed that there were no allelochemical effects
 from kelp on P. versipora. We conclude that E. radiata inhibits P.
 versipora establishment and development through abrasion, and the survey
 data confirmed that recent climate-driven kelp loss released corals from
 this effect, facilitating their expansion on high-latitude reefs in
 Western Australia. This shows how competitive interactions actively shield
 against species expansion in biogeographic transition zones and suggests a
 continued decline of kelp canopies will increase the permeability of
 temperate reefs to warm affinity species such as scleractinian corals.
DOI: 10.5061/dryad.rjdfn2zdq
title: Data from: Climatic stress decreases tick survival but increases rate of host-seeking behavior

description: Ticks are vectors of many diseases and are expanding in geographic
 distribution. However, how ticks will fare in their new environments where
 they may experience stressful climatic conditions at the expansion front
 remains unclear. Since there is a trade-off in ticks between behaviors
 that promote longevity and behaviors that promote reproduction, we
 hypothesized that extreme climatic stress reduces the survivorship of
 ticks but increases the frequency of tick host-seeking behavior or
 questing. Here, we used a novel method to simulate climatic stress on
 individual ticks of three species – Amblyomma americanum, Dermacentor
 variabilis, and Ixodes scapularis – to evaluate their survival,
 physiology, and questing behavior. The first experiment involved placing
 144 adult ticks of each species in two temperature ranges (15-25 °C and
 25-35 °C) and three relative humidity treatments (32% RH, 58% RH, and 84%
 RH). We assessed the ticks daily for survivorship and questing, and we
 measured water loss by comparing the mass of each tick when it died to
 when it was fully hydrated. In this first experiment, ticks in warmer and
 less humid conditions generally died faster than in cooler and more humid
 conditions. Ticks of all three species were more likely to quest shortly
 before their death and consistently died after losing approximately 50-56%
 of total body water content, but Ixodes reached that threshold much faster
 than the other two species. The second experiment involved placing 18
 ticks of each species at 35 °C and 32% RH. We assessed the ticks every
 three hours for survivorship, questing, and water loss. Ticks again were
 more likely to quest shortly before their death. With frequent checks, we
 were able to measure the dehydration tolerance more accurately and the
 rate of water loss. Ticks of all three species consistently died after
 losing approximately 51% of total body water content. However, Ixodes lost
 water approximately 5× faster than Amblyomma and 11× faster than
 Dermacentor. These results demonstrate that severe climatic stress tilts
 the trade-off toward higher questing rates, but not higher overall
 questing time because of reduced survival rates. Further investigations of
 ticks’ behavioral and physiological responses to abiotic stress are
 necessary to develop robust models of how climate change will affect the
 transmission of tick-borne diseases.
DOI: 10.5061/dryad.v15dv41zp
title: A spatially resolved timeline of the human maternal-fetal interface

description: Beginning in the first trimester, fetally-derived extravillous
 trophoblasts (EVTs) invade the uterus and remodel its spiral arteries,
 transforming them into large, dilated blood vessels. Several mechanisms
 have been proposed to explain how EVTs coordinate with the maternal
 decidua to promote a tissue microenvironment conducive to spiral artery
 remodeling (SAR). However, it remains a matter of debate which immune and
 stromal cells participate in these interactions and how this evolves with
 respect to gestational age. Here, we used a multiomic approach combining
 the strengths of spatial proteomics and transcriptomics to construct the
 first spatiotemporal atlas of the human maternal-fetal interface in the
 first half of pregnancy. We used multiplexed ion beam imaging by
 time-of-flight (MIBI-TOF) and a 37-plex antibody panel to analyze ~500,000
 cells and 588 arteries within intact decidua from 66 patients between 6-20
 weeks of gestation, integrating this with coregistered transcriptomic
 profiles. Gestational age substantially influenced the frequency of
 maternal immune and stromal cells, with tolerogenic subsets expressing
 CD206, CD163, TIM-3, Galectin-9, and IDO-1 increasingly enriched and
 colocalized at later time points.  In contrast, SAR progression
 preferentially correlated with EVT invasion and was transcriptionally
 defined by 78 gene ontology pathways exhibiting unique monotonic and
 biphasic trends.  Lastly, we developed an integrated model of SAR
 where invasion is accompanied by upregulation of pro-angiogenic,
 immunoregulatory EVT programs that promote interactions with vascular
 endothelium while avoiding activation of maternal immune cells.
DOI: 10.5061/dryad.280gb5ms8
title: Medusapyga LaBonte and Maddison, a new genus of Anillini (Coleoptera: Carabidae: Trechinae) from the Pacific Northwest of the United States

description: A new genus of anilline carabid
 beetle, Medusapyga LaBonte and Maddison, is described
 from the Pacific Northwest. Two new species, herein described, comprise
 this genus. Members of the genus are distinguished from other described
 North American Anillini by: an extensive field of long bifurcate setae on
 each laterotergite IX of females, a distinct ventrobasal spine on the male
 profemur, and two strongly asymmetrically dilated and ventrally setose
 basal protarsomeres in males. Bifurcate setae on the laterotergites have
 not previously been described for any carabid beetle. A more restricted
 field of shorter bifurcate setae is also present in the Californian
 anilline genus Anillaspis Casey, which we infer to be
 the sister of Medusapyga. A molecular phylogenetic analysis based
 upon eight gene fragments (two nuclear ribosomal genes, five fragments of
 nuclear protein-coding genes, and a mitochondrial gene) demonstrates the
 distinctiveness of Medusapyga, and places it in a clade with the
 other genera from the United States. The sister group of Medusapyga +
 Anillaspis is the Californian genus Anillodes Jeannel.
 Medusapyga alsea LaBonte, the type species of the genus, is known
 only from three proximate localities in the Oregon Coast Range southwest
 of Corvallis in western Oregon. Medusapyga
 chehalis LaBonte is known only from four proximate localities in
 the Black Hills southwest of Olympia in southwestern Washington state.
 These are the first species of Anillini described from the Pacific
 Northwest. Details of habitat and natural history are provided.
description: Extracted DNA was subjected to PCR, and the products Sanger
 sequenced. Maximum likelihood analysis was conducted using
 IQ-TREE.
DOI: 10.5061/dryad.b5mkkwhgc
title: A new subgenus of Bembidion Latreille from México and Guatemala, with descriptions of two new species (Coleoptera: Carabidae)

description: A new subgenus of Bembidion, Geocosmius subg.
 nov., is described from forests of México and
 Guatemala.  Geocosmius includes Bembidion nahuala Erwin as its type species, as well as B. franiaeErwin, B. elescarabajo sp. nov., and additional forms similar to B. nahuala. In México this subgenus is widespread, ranging from Chiapas and Oaxaca north and west to Jalisco, Querétaro, and Hidalgo; most specimens are from cloud forests between 1700–2700m in elevation.  A molecular phylogenetic analysis based upon eight genes indicates that Geocosmius is the sister group of subgenus Liocosmius, from western North America.  In addition, a new species of subgenus Liocosmius, B. cachagua sp. nov., is described from three localities in California.  Illumina sequencing was used to acquire DNA sequences of six pinned, dried specimens, which ranged in age from 24 to 57 years, allowing the phylogenetic placement of four of the studied species to be determined.
description: For one sample, extracted DNA was subjected to PCR, and the
 products Sanger sequenced.  For most samples, however, DNA was sequenced
 on an Illumina HiSeq (various models), and the resulting paired reads were
 trimmed and assembled using CLC Genomics Workbench.  Target genes were
 then acquired from those assemblies using BLAST. Maximum likelihood
 analysis was conducted using IQ-TREE.
DOI: 10.5061/dryad.x0k6djhnh
title: Utah TIC consent builder user evaluation 1

description: This dataset accompanies the manuscript titled "Consent Builder - An
 Innovative Tool for Creating Research Informed Consent Documents"
 submitted for publication in JAMIA Open July 2022 (Manuscript ID
 JAMIO-2021-0170). The data are a usability study conducted to evaluate a
 software tool for building consent documents for multi-center trials. The
 sample was project managers who had used to tool to design consent forms
 for trials.
description: Data were collected via an online survey in REDCap. The dataset
 incudes SUS scale response rescoring and total calculated SUS score in
 addition to the raw data.
DOI: 10.5061/dryad.0vt4b8h2p
title: Black-tailed Gull GPS foraging trip data and acceleration raw data

description: Areas at which seabirds forage intensively can be discriminated by
 tracking the individuals’ at-sea movements. However, such tracking data
 may not accurately reflect the birds’ exact foraging locations. In
 addition to tracking data, gathering information on the dynamic body
 acceleration of individual birds may refine inferences on their foraging
 activity. Our aim was to classify the foraging behaviors of
 surface-feeding seabirds using data on their body acceleration and use
 this signal to discriminate areas where they forage intensively.
 Accordingly, we recorded the foraging movements and body acceleration data
 from seven and ten black-tailed gulls (Larus crassirostris) in 2017 and
 2018, respectively, using GPS loggers and accelerometers. By referring to
 video footage of flying and foraging individuals, we were able to classify
 flying (flapping flight, gliding, and hovering), foraging (surface
 plunging, hop plunging, and swimming), and maintenance (drifting,
 preening, etc.) behaviors using the speed, body angle, and cycle and
 amplitude of body acceleration of the birds. Foraging areas determined
 from acceleration data corresponded roughly with sections of low speed and
 area-restricted searching (ARS) identified from the GPS tracks. However,
 this study suggests that the occurrence of foraging behaviors may be
 overestimated based on low-speed trip sections, because birds may exhibit
 long periods of reduced movement devoted to maintenance. Opposite, the
 ARS-based approach may underestimate foraging behaviors since birds can
 forage without conducting an ARS. Therefore, our results show that the
 combined use of accelerometers and GPS tracking helps to adequately
 determine the important foraging areas of black-tailed gulls. Our approach
 may contribute to better discriminate ecologically or biologically
 significant areas in marine environments.
description: The dataset was collected using GPS data logger (GipSy5,
 TechnoSmart, Italy) and accelerometer (Axy, TechnoSmart Italy). Only the
 trip period of  GPS data were included.
description: The files need to be opened using R or Igor pro.