cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.1256893
title: Assembly, Annotation, And Read Counts For A Simulated Upwelling Experiment

description: Data sets for:

<strong>Lampe RH</strong>, Cohen NR, Ellis KA, Bruland KW, Maldonado MT, Peterson TD, Till CP, Brzezinski MA, Bargu S, Thamatrakoln K, Kuzminov FI, Twining BS, and Marchetti A. (2018) Divergent gene expression among phytoplankton taxa in response to upwelling. <em>Environmental Microbiology</em> 20, 3069-3082.

File descriptions:


	contigs.fa - final assembly
	counts_KO.tab - Raw counts for each contig with taxonomic annotation and KEGG Ortholog (KO) annotation.
	counts_MO.tab - Raw counts for each contig with taxonomic annotation and KEGG Modules (MO) annotation.
	counts_kegghit.tab - Raw counts for each contig with taxonomic annotation and a KEGG gene.


Counts column names correspond to the following treatments:

<pre>------------------------
Treatment  | Sample IDs
------------------------
T0         | Q45
T72-C      | Q46
T72-Fe     | Q50
T72-DFB    | Q53
T120-C     | Q55, Q56, Q57
T120-Fe    | Q58, Q59, Q60
T120-DFB   | Q61, Q62, Q63
T120-FeDFB | Q64, Q65, Q66
</pre>

All counts files are tab delimited.
DOI: 10.5281/zenodo.1256894
title: Assembly, Annotation, And Read Counts For A Simulated Upwelling Experiment

description: Data sets for:

<strong>Lampe RH</strong>, Cohen NR, Ellis KA, Bruland KW, Maldonado MT, Peterson TD, Till CP, Brzezinski MA, Bargu S, Thamatrakoln K, Kuzminov FI, Twining BS, and Marchetti A. (2018) Divergent gene expression among phytoplankton taxa in response to upwelling. <em>Environmental Microbiology</em> 20, 3069-3082.

File descriptions:


	contigs.fa - final assembly
	counts_KO.tab - Raw counts for each contig with taxonomic annotation and KEGG Ortholog (KO) annotation.
	counts_MO.tab - Raw counts for each contig with taxonomic annotation and KEGG Modules (MO) annotation.
	counts_kegghit.tab - Raw counts for each contig with taxonomic annotation and a KEGG gene.


Counts column names correspond to the following treatments:

<pre>------------------------
Treatment  | Sample IDs
------------------------
T0         | Q45
T72-C      | Q46
T72-Fe     | Q50
T72-DFB    | Q53
T120-C     | Q55, Q56, Q57
T120-Fe    | Q58, Q59, Q60
T120-DFB   | Q61, Q62, Q63
T120-FeDFB | Q64, Q65, Q66
</pre>

All counts files are tab delimited.
DOI: 10.5281/zenodo.1258222
title: Nsd3-Short Promotes Migration Of A549 Lung Cancer Cells

description: <strong>SGC Open Notebook Project to Characterize the HMTase NSD3</strong>

<strong>Exp025 Objective:</strong> In a previous experiment (exp024), we observed an increase in E-cadherin expression in response to knockdown of the short isoform of NSD3. To determine if this change is functionally relevant, we performed wound healing assays to measure any corresponding alteration in the migratory potential of A549 lung epithelial cancer cells.
description: Funding Acknowledgment: The SGC is a registered charity (number 1097737) that receives funds from AbbVie, Bayer Pharma AG, Boehringer Ingelheim, Canada Foundation for Innovation, Eshelman Institute for Innovation, Genome Canada through Ontario Genomics Institute [OGI-055], Innovative Medicines Initiative (EU/EFPIA) [ULTRA-DD grant no. 115766], Janssen, Merck KGaA, Darmstadt, Germany, MSD, Novartis Pharma AG, Ontario Ministry of Research, Innovation and Science (MRIS), Pfizer, São Paulo Research Foundation-FAPESP, Takeda, and Wellcome.
DOI: 10.5281/zenodo.1258223
title: Nsd3-Short Promotes Migration Of A549 Lung Cancer Cells

description: <strong>SGC Open Notebook Project to Characterize the HMTase NSD3</strong>

<strong>Exp025 Objective:</strong> In a previous experiment (exp024), we observed an increase in E-cadherin expression in response to knockdown of the short isoform of NSD3. To determine if this change is functionally relevant, we performed wound healing assays to measure any corresponding alteration in the migratory potential of A549 lung epithelial cancer cells.
description: Funding Acknowledgment: The SGC is a registered charity (number 1097737) that receives funds from AbbVie, Bayer Pharma AG, Boehringer Ingelheim, Canada Foundation for Innovation, Eshelman Institute for Innovation, Genome Canada through Ontario Genomics Institute [OGI-055], Innovative Medicines Initiative (EU/EFPIA) [ULTRA-DD grant no. 115766], Janssen, Merck KGaA, Darmstadt, Germany, MSD, Novartis Pharma AG, Ontario Ministry of Research, Innovation and Science (MRIS), Pfizer, São Paulo Research Foundation-FAPESP, Takeda, and Wellcome.
DOI: 10.15151/esrf-es-102440920
title: Macromolecular crystallography at the Philipps University Marburg (MarBAG)
DOI: 10.5281/zenodo.753555
title: Hrit Seviri Data 12:30 Utc, January 28, 2017

description: HRIT Meteosat-10 SEVIRI data received at SMHI 12:30 UTC, January 28, 2017. Full disk.

Copyright EUMETSAT
description: Data is copyright EUMETSAT
DOI: 10.5517/ccdc.csd.cc1pf1bh
title: CCDC 1561666: Experimental Crystal Structure Determination

description: Related Article: Shanshan Mao, Xintong Han, Chuang Li, Yuling Xu, Kesheng Shen, Xinkui Shi, Huilu Wu|2018|Spectrochim.Acta,Part A|203|408|doi:10.1016/j.saa.2018.06.003
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pf1cj
title: CCDC 1561667: Experimental Crystal Structure Determination

description: Related Article: Shanshan Mao, Xintong Han, Chuang Li, Yuling Xu, Kesheng Shen, Xinkui Shi, Huilu Wu|2018|Spectrochim.Acta,Part A|203|408|doi:10.1016/j.saa.2018.06.003
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1q8wd8
title: CCDC 1587460: Experimental Crystal Structure Determination

description: Related Article: Pinki Yadav, Kashmiri Lal, Lokesh Kumar, Ashwani Kumar, Anil Kumar, Avijit K. Paul, Rajnish Kumar|2018|Eur.J.Med.Chem.|155|263|doi:10.1016/j.ejmech.2018.05.055
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z2wwt
title: CCDC 1820037: Experimental Crystal Structure Determination

description: Related Article: Jiangkun Dai, Wenjia Dan, Yunyun Zhang, Mengfan He, Junru Wang|2018|Bioorg.Med.Chem.Lett.|28|3123|doi:10.1016/j.bmcl.2018.06.001
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z4wrr
title: CCDC 1821955: Experimental Crystal Structure Determination

description: Related Article: Ivana Šagud, Valentina Milašinović, Krešimir Molčanov, Željko Marinić, Irena Škorić|2018|J.Mol.Struct.|1171|117|doi:10.1016/j.molstruc.2018.06.005
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z9lhc
title: CCDC 1826473: Experimental Crystal Structure Determination

description: Related Article: Wu Xiao-Hui, Ren Ning, Zhang Jian-Jun|2018|J.Chem.Thermodynamics|132|476|doi:10.1016/j.jct.2018.05.020
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z9phg
title: CCDC 1826566: Experimental Crystal Structure Determination

description: Related Article: Guillermo Ahumada, Mauricio Fuentealba, Thierry Roisnel, Samia Kahlal, David Carrillo, Ricardo Cordova, Jean-Yves Saillard, Jean-René Hamon, Carolina Manzur|2018|Polyhedron|151|279|doi:10.1016/j.poly.2018.05.048
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1plhyq
title: CCDC 1566924: Experimental Crystal Structure Determination

description: Related Article: Gokay Aydin, Tahir Savran, Şule Baran, Arif Baran|2018|Bioorg.Med.Chem.Lett.|28|2555|doi:10.1016/j.bmcl.2018.05.034
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1plj3x
title: CCDC 1566929: Experimental Crystal Structure Determination

description: Related Article: Gokay Aydin, Tahir Savran, Şule Baran, Arif Baran|2018|Bioorg.Med.Chem.Lett.|28|2555|doi:10.1016/j.bmcl.2018.05.034
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1plj4y
title: CCDC 1566930: Experimental Crystal Structure Determination

description: Related Article: Gokay Aydin, Tahir Savran, Şule Baran, Arif Baran|2018|Bioorg.Med.Chem.Lett.|28|2555|doi:10.1016/j.bmcl.2018.05.034
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zggd9
title: CCDC 1831151: Experimental Crystal Structure Determination

description: Related Article: Meng Li, Ning Gao, Qiu Jin, De-Rui Deng, Bi-Ying Liu, Gong-Ping Tang, Hai-Ying Wei, Yue-Hua Zhang, Zhi-Lei Wu|2018|Polyhedron|151|355|doi:10.1016/j.poly.2018.05.054
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zggfb
title: CCDC 1831152: Experimental Crystal Structure Determination

description: Related Article: Meng Li, Ning Gao, Qiu Jin, De-Rui Deng, Bi-Ying Liu, Gong-Ping Tang, Hai-Ying Wei, Yue-Hua Zhang, Zhi-Lei Wu|2018|Polyhedron|151|355|doi:10.1016/j.poly.2018.05.054
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zq2qh
title: CCDC 1838477: Experimental Crystal Structure Determination

description: Related Article: Haruka Homma, Shinji Harada, Atsushi Nishida|2018|Tetrahedron Lett.|59|2755|doi:10.1016/j.tetlet.2018.06.001
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zq2rj
title: CCDC 1838478: Experimental Crystal Structure Determination

description: Related Article: Haruka Homma, Shinji Harada, Atsushi Nishida|2018|Tetrahedron Lett.|59|2755|doi:10.1016/j.tetlet.2018.06.001
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zq393
title: CCDC 1838495: Experimental Crystal Structure Determination

description: Related Article: Haruka Homma, Shinji Harada, Atsushi Nishida|2018|Tetrahedron Lett.|59|2755|doi:10.1016/j.tetlet.2018.06.001
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zzj5n
title: CCDC 1846582: Experimental Crystal Structure Determination

description: Related Article: Egor V. Verbitskiy, Ekaterina M. Dinastiya, Anna A. Baranova, Konstantin O. Khokhlov, Roman D. Chuvashov, Yuliya A. Yakovleva, Nadezhda I. Makarova, Elena V. Vetrova, Anatoly V. Metelitsa, Pavel A. Slepukhin, Gennady L. Rusinov, Oleg N. Chupakhin, Valery N. Charushin|2018|Dyes Pigm.|159|35|doi:10.1016/j.dyepig.2018.05.075
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15151/esrf-es-54672194
title: Proteins and protein/DNA/RNA complexes involved in biosynthesis, protein folding and
degradation, splicing, cancer, host pathogen interacti
DOI: 10.5517/ccdc.csd.cc1zh36s
title: CCDC 1831765: Experimental Crystal Structure Determination

description: Related Article: Ibaniewkor L. Mawnai, Sanjay Adhikari, Werner Kaminsky, Mohan Rao Kollipara|2018|J.Organomet.Chem.|869|26|doi:10.1016/j.jorganchem.2018.05.023
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zh37t
title: CCDC 1831766: Experimental Crystal Structure Determination

description: Related Article: Ibaniewkor L. Mawnai, Sanjay Adhikari, Werner Kaminsky, Mohan Rao Kollipara|2018|J.Organomet.Chem.|869|26|doi:10.1016/j.jorganchem.2018.05.023
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zh38v
title: CCDC 1831767: Experimental Crystal Structure Determination

description: Related Article: Ibaniewkor L. Mawnai, Sanjay Adhikari, Werner Kaminsky, Mohan Rao Kollipara|2018|J.Organomet.Chem.|869|26|doi:10.1016/j.jorganchem.2018.05.023
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zh39w
title: CCDC 1831768: Experimental Crystal Structure Determination

description: Related Article: Ibaniewkor L. Mawnai, Sanjay Adhikari, Werner Kaminsky, Mohan Rao Kollipara|2018|J.Organomet.Chem.|869|26|doi:10.1016/j.jorganchem.2018.05.023
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zh3bx
title: CCDC 1831769: Experimental Crystal Structure Determination

description: Related Article: Ibaniewkor L. Mawnai, Sanjay Adhikari, Werner Kaminsky, Mohan Rao Kollipara|2018|J.Organomet.Chem.|869|26|doi:10.1016/j.jorganchem.2018.05.023
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zh3cy
title: CCDC 1831770: Experimental Crystal Structure Determination

description: Related Article: Ibaniewkor L. Mawnai, Sanjay Adhikari, Werner Kaminsky, Mohan Rao Kollipara|2018|J.Organomet.Chem.|869|26|doi:10.1016/j.jorganchem.2018.05.023
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zh3dz
title: CCDC 1831771: Experimental Crystal Structure Determination

description: Related Article: Ibaniewkor L. Mawnai, Sanjay Adhikari, Werner Kaminsky, Mohan Rao Kollipara|2018|J.Organomet.Chem.|869|26|doi:10.1016/j.jorganchem.2018.05.023
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/yrcyf82ncn.1
title: Data for: Using fluorescence microscopy to discern in situ from reworked palynomorphs in dynamic depositional environments – an example from sediments of the late Miocene to early Pleistocene Caspian Sea

description: Data presented in the manuscript: Using fluorescence microscopy to discern in situ from reworked palynomorphs in dynamic depositional environments – an example from sediments of the late Miocene to early Pleistocene Caspian Sea
DOI: 10.5517/ccdc.csd.cc1n8kk1
title: CCDC 1527573: Experimental Crystal Structure Determination

description: Related Article: Henri Brunner, Takashi Tsuno, Takaki Kurosawa, Hikaru Kitamura, Hayato Ike|2018|Organometallics|37|1892|doi:10.1021/acs.organomet.8b00146
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.1261700
title: Iterated Prisoner'S Dilemma Best Response Data For Games Of Length 200

description: Iterated Prisoner's Dilemma Best response data for games of length 200, generated by a genetic algorthm. The opponents listed are the ones found in the Axelrod Pyhton library. This data was generated as part of a final year BSc project which can be found here: https://github.com/GitToby/FinalYearProject/

The report can be found here: https://github.com/GitToby/FinalYearProject/blob/master/LaTeX/tex/main.pdf
DOI: 10.5281/zenodo.1261701
title: Iterated Prisoner'S Dilemma Best Response Data For Games Of Length 200

description: Iterated Prisoner's Dilemma Best response data for games of length 200, generated by a genetic algorthm. The opponents listed are the ones found in the Axelrod Pyhton library. This data was generated as part of a final year BSc project which can be found here: https://github.com/GitToby/FinalYearProject/

The report can be found here: https://github.com/GitToby/FinalYearProject/blob/master/LaTeX/tex/main.pdf
DOI: 10.5517/ccdc.csd.cc1nggdz
title: CCDC 1533241: Experimental Crystal Structure Determination

description: Related Article: Firas F. Awwadi, Manal I. AlWahsh, Louise N. Dawe, Mark M. Turnbull|2018|J.Mol.Struct.|1171|294|doi:10.1016/j.molstruc.2018.05.110
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1nggf0
title: CCDC 1533242: Experimental Crystal Structure Determination

description: Related Article: Firas F. Awwadi, Manal I. AlWahsh, Louise N. Dawe, Mark M. Turnbull|2018|J.Mol.Struct.|1171|294|doi:10.1016/j.molstruc.2018.05.110
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1nggg1
title: CCDC 1533243: Experimental Crystal Structure Determination

description: Related Article: Firas F. Awwadi, Manal I. AlWahsh, Louise N. Dawe, Mark M. Turnbull|2018|J.Mol.Struct.|1171|294|doi:10.1016/j.molstruc.2018.05.110
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.