cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11869548.v1
title: WN18

description: This WORDNET TENSOR DATA consists of a collection of triplets (synset, relation_type, triplet) extracted from WordNet 3.0 (http://wordnet.princeton.edu). This data set can be seen as a 3-mode tensor depicting ternary relationships between synsets.<br><br>The definitions file (wordnet-mlj12-definitions.txt) contains one synset per line with the following format: synset_id (a 8-digit unique identifier) intelligible name (word+POS_tag+sense_index), definition. The previous 3 pieces of information are separated by a tab ('\t').<br>All wordnet-mlj12-*.txt files contain one triplet per line, with 2 synset_ids and relation type identifier in a tab separated format. The first element is the synset_id of the left hand side of the relation triple, the third one is the synset_id of the right hand side and the second element is the name of the type of relations between them.<br>There are 40,943 synsets and 18 relation types among them. The training set contains 141,442 triplets, the validation set 5,000 and the test set 5,000.<br>All triplets are unique and we made sure that all synsets appearing in the validation or test sets were occurring in the training set.<br>
DOI: 10.6084/m9.figshare.12783467.v2
title: base datos agronómicos Mayo 2018.xlsx

description: Dataset of morphoagronomic data colected during three seasons in several regions of Colombia.
DOI: 10.6084/m9.figshare.17134517.v1
title: Vocabulario de la Guerra de las Galaxias

description: Aquí se presentan varias de las palabras reales y ficticias del vocabulario utilizado en la saga intergaláctica de George Lucas a lo largo de sus más de 40 años de historia y que han influido a varias generaciones desde entonces hasta el dia de hoy.
DOI: 10.6084/m9.figshare.22647661.v2
title: Serum PFAS in Municipal Firefighters

description: This dataset contains demographic information, fireground exposure variables, and PFAS measurements for 151 firefighters, including 99 incumbents and 52 recruits. To protect privacy, female recruits (N = 3) were excluded from the dataset. Follow-up data collection was conducted exclusively for recruit firefighters. The fireground exposure variables in this dataset include six variables: total number of fire runs, total duration (hours) of fire runs, days since most recent fire, number of structural fire runs, duration (hours) of structural fire runs, and days since most recent structural fire. The dataset also includes nine PFAS measurements, including PFHxS, n-PFOS, Sm-PFOS, n-PFOA, Sb-PFOA, PFNA, PFDA, PFUnDA, and MeFOSAA, measured in nanograms per milliliter (ng/mL). The limit of detection for all PFAS in this study was 0.1 ng/mL. <br> <br>
DOI: 10.6084/m9.figshare.19499648.v1
title: patches and local annotations, slide 021, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.26264234.v1
title: plantrecruitment_dataset.xlsx

description: This dataset contains woody plant recruitment information for a one-decade restored Andean forest in Medellin, Colombia, along with environmental variables of the permanent plots where the recruitment study took place.
DOI: 10.6084/m9.figshare.5519920.v2
title: Anodal and cathodal transcranial direct current stimulation can decrease force output of knee extensors during an intermittent MVC fatiguing task in young healthy male participants

description: Effect of tDCS on maximal intensity knee extension fatiguing task.
DOI: 10.17632/k7ds5nx3dw
title: Generation Z's Perceptions and Attitudes towards Tourism and Hospitality a Career Option – A Preliminary Investigation of Residents of Jharkhand

description: The purpose of this study is to examine the attitudes and perceptions of Generation Z of Jharkhand, India towards careers in the tourism industry. The study is exploratory and based on a quantitative approach. A total of 196 respondents have been selected by random sampling from all the districts of Bihar and Jharkhand for this study. Areas that students have concerns over include respondent's relationship with their managers, promotion opportunities, career paths, and the pay and conditions offered within the industry. The study also focuses about the awareness of Gen Z about the Indian Tourism Development Programs, Jharkhand Tourism and the various regulations implemented in tourism sector. The data was collected by with the help of Google forms. The analysis has been done using Statistical Package for the Social Sciences (SPSS) software. The research shows that the Gen Z is good tourists but they have their doubts on taking up career in tourism sector. Though, they are inclined in doing so if this sector is more digital savvy, have good career development opportunities and if the tourism sector in Jharkhand is improved.
DOI: 10.6084/m9.figshare.24565657.v1
title: Supplementary Material for: COVID-19 in patients with active - higher inflammatory activity predicts poor outcome.

description: Abstract Introduction: Active malignancies have been identified as an independent risk-factor for severity and mortality in COVID-19. However, direct comparisons between SARS-CoV-2 infected patients with active (acP) and non-active cancers (n-acP) remain scarce. Patients and Methods: We retrospectively analyzed a cohort of cancer patients with PCR confirmed SARS-CoV-2 infection, enrolled from 03/16/2020 to 07/31/2021. Data on demographics, cancer, and laboratory findings were collected. Descriptive and subsequent regression analysis was performed. Endpoints were “deterioration to severe COVID-19” and “infection-associated mortality”. Results: In total, 987 cancer patients (510 acP vs 477 n-acP) were included in our analysis. The majority was &gt;55 years, more men than women were included. At detection of SARS-CoV-2, 65.5% of patients had mild/moderate symptoms, while deterioration to severe COVID-19 was slightly more common in acP (19% vs 16%; p=0.284). COVID-19-associated mortality was significantly higher in acP (24% vs 17.5%, p&lt;0.001). In terms of laboratory tests, severe cytopenia and elevated levels of inflammatory markers were common findings in acP at baseline, particularly in those, who developed a severe infection or died. Multivariate analysis revealed that ferritin (HR 14.24 [2.1–96], p=0.006) and CRP (HR 2.85 [1.02–8.02], p=0.046) were associated with severity and mortality. In n-acP, association was seen for ferritin only (HR 4.1 [1.51–11.17], p=0.006). Conclusion: Comparing patients with active and non-active cancer, the former showed higher mortality rates. Also, inflammatory markers were significantly increased assuming higher levels of inflammation may play a role in the adverse outcome of COVID-19 in aCP. This study is registered at the German Clinical Trials Register (registry name (DRSK), trial registration ID: S00021145). Date of registration: 08.04.2020.
DOI: 10.17632/89hrg95zhy
title: MicroCT data for Tanaid specimen

description: MicroCT stack of slice images of Tanaid crab that lives in small shell. Data set slice resolution (isotropic voxel size 2.028815 micrometers). MicroCT scanned at Stellenbosch CT facility using Nanotom S system, VGSTUDIO MAX 3.2 used for processing the data (de-noising).
DOI: 10.6084/m9.figshare.3560397.v1
title: Appendix B. Body length differences between treatments (mean and standard error).

description: Body length differences between treatments (mean and standard error).
DOI: 10.6084/m9.figshare.27162108.v1
title: Observations within shelters vs availability for Sonoran Desert Tortoises in 2 Arizona populations

description: At Sugarloaf we monitored female tortoises (range 184–289 mm midline carapace length [CL]) weekly using radio telemetry in 1991–1993 and 1997–2005 as part of a reproductive ecology study (Averill-Murray 2002; Averill-Murray et al. 2018). During the 11 years of radio-tracking, all burrows used by both telemetered and opportunistically encountered tortoises were marked with numbered aluminum tags (n = 522). We use the term “burrow” specifically to refer to a subsurface cavity &gt;1/2 the tortoise’s length either formed by erosion or excavated by a tortoise or another animal (Burge 1978). We categorized burrow types as “rock” (cover provided by rocks or boulders, including large boulder piles in which the tortoise could not be visualized), “soil” (cover provided by soil or vegetation with no substantial rock component), and “packrat” (freestanding white-throated woodrat Neotomoa albigula nest independent of other shelter types; packrat nests inside rock shelters were categorized as “rock”). We did not individually mark “pallets” (shallow, scraped out areas &lt;1/2 tortoise length) or other temporary shelters unmodified by the tortoise (e.g., under trees, shrubs, or rock overhangs).At FMR, as part of a habitat-use study we attached radio transmitters (ATS, AVM, Telonics, or Wildlife Materials) to the anterior carapace of adult tortoises as above (Riedle et al. 2008). During the winter months (November through February) when tortoises were inactive, we located tortoises once a week. During the activity season (March through October) we located tortoises 2–3 times weekly, obtaining both morning and evening locations. From 2000 to 2003, we searched areas in which tortoises might occur within FMR, concentrating on sites suitable for burrow excavation, especially including incised washes with caliche caves and the volcanic hill. We also searched all washes within the study area, whether incised or not, and spent considerable time on the alluvial fans. We marked burrows in which we observed tortoises with individually numbered aluminum tags (n = 124), and we mapped locations of all caliche caves large enough to shelter a tortoise ≥180 mm CL (n = 463). Burrow types included caliche, rock, soil, and packrat.We used permutation-based sign tests with R package <i>phuassess</i> to assess whether the total number of observations by each tortoise within different shelter types differed relative to their availability. We conducted these analyses separately for FMR and Sugarloaf due to the lack of caliche burrows at Sugarloaf.
DOI: 10.6084/m9.figshare.21704222.v1
title: H&E masks

description: binary masks depicting blood vessels. 0: background 1: bloodvessel
DOI: 10.6084/m9.figshare.6114659.v2
title: Work intensification and burnout in secondary teachers

description: This data measures the experience of work intensification and burnout in a sample of Australian secondary school teachers.
DOI: 10.6084/m9.figshare.19499480.v1
title: patches and local annotations, slide 015, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.24893697.v1
title: Supplementary Material for: Clinical significance of the preoperative inflammatory burden index in esophageal cancer

description: Introduction: The inflammatory burden index (IBI) serves as a prognostic marker for several cancers. Here, we evaluated the predictive value of preoperative IBI associated with the surgical and oncological outcomes of patients with esophageal cancer (EC).
Methods: The IBI was formulated as C-reaction protein x neutrophil/lymphocyte. We retrospectively analyzed preoperative IBI of 147 EC patients receiving esophagectomy between 2008 and 2018. Cox proportional hazards models and multivariable logistic regression were employed to identify independent risk factors of surgical site infection and prognosis.
Results: Increased preoperative IBI significantly correlated with higher tumor stage. Patients with high IBI experienced shorter overall survival (P = 0.0002) and disease-free survival (P = 0.002) compared with those with low IBI. In the adjusted Cox-proportional hazards regression models, increased IBI served as an independent prognostic factor for overall survival (hazard ratio, 3.56; 95% confidence interval, 1.79–7.34; P = 0.0003) and disease-free survival (hazard ratio, 3.03; 95% confidence interval, 1.60–5.92; P = 0.007). Multivariable analysis identified preoperative high IBI served as an independent risk factor for overall surgical site infection (odds ratio, 2.53; 95% confidence interval, 1.00–6.38; P = 0.049).
Conclusion: Preoperative IBI may serve as a useful predictor of prognosis and surgical site infection of patients with EC after esophagectomy.
DOI: 10.17632/xnwcr9ny4r
title: Shapefile of the Eastern Bandung Basin

description: The dataset for the manuscript.
DOI: 10.6084/m9.figshare.20499915.v1
title: Acrossocheilus fasciatus mRNA and miRNA.zip

description: mRNA and miRNA sequences were obtained by <em>Acrossocheilus fasciatus</em> transcriptome sequencing, and bioinformatic analysis was performed on them.
DOI: 10.6084/m9.figshare.21860205.v1
title: T. jamesii SDM files

description: Files and code used by Gaier et al. for developing SDMs for Telesonix jamesii. Files include occurrence data and raster images. See README.md for metadata.
DOI: 10.6084/m9.figshare.24630810.v2
title: Thermally activated delayed fluorescence emitter characteristic

description: This is a TADF data set containing 250+ samplesIn the future, this data set will continue to be updated. If you would like to use this dataset, please contact me. My email is dungziklei@gmail.com
DOI: 10.17632/rgf4rf7dfm
title: Data for: Suitability assessment of different hemp (Cannabis sativa L.) varieties to the cultivation environment

description: Hcrops_Setup.exe is the installation package of the model Hcrops. Hcrops simulates a hemp crop and has been developed, tested and calibrated using the SEMoLa language and simulation environment (Danuso and Rocca, 2014). It is a dynamic, mechanistic model, with daily time step, considering the hemp phenological development, the soil water balance and the irrigation requirement depending on a water stress factor. Moreover, it calculates the yield reduction due to water stress following the method of evapotranspiration of FAO (Doorembos and Kassam,1979) and the seed oil content (Oil) depending on the average daily maximum temperature of the flowering-maturity period (Atmax). A good relationship has been found in experimental data of this work, so the model implemented the relationship: Oil = 115 - 3.1 · Atmax Soil moisture is calculated as the balance among inputs (rainfall and irrigation) and outputs (actual evapotranspiration Eta and drainage). The soil is considered a single layer with the depth of the roots. Roots increase depth at a rate depending on temperature and till to the flowering stage. Root deepening could be limit also by a physical limit in the soil.
DOI: 10.6084/m9.figshare.3530693.v1
title: Supplement 1. R-language code to compute the coordinates of the Gutianshan plot cells for the various cell sizes used in the paper, plot maps indicating cell positions, compute PCNM eigenfunctions, and plot maps of all PCNM eigenfunctions.

description: File List CreateAndMap.txt Description This supplement contains R-language code to compute the coordinates of the Gutianshan plot cells for the various cell sizes used in the paper, plot maps indicating cell positions, compute PCNM eigenfunctions, and plot maps of all PCNM eigenfunctions, with instructions interspersed.
DOI: 10.6084/m9.figshare.21770384.v1
title: EUSALP LULC class descriptions

description: EUSALP LULC class descriptions of 65 LULC classes
DOI: 10.6084/m9.figshare.27965037.v2
title: Light competition underpins eutrophication-induced plant diversity loss by modulating the gain and loss of resource-acquisitive species

description: A full-factorial field experiment independently manipulating understory light, nitrogen and phosphorus in a randomized block design on the Tibetan Plateau
DOI: 10.6084/m9.figshare.28387862.v1
title: Bayesian hierarchical model fits for the manuscript "Uncovering temperature sensitivity of West Nile virus transmission: novel computational approaches to mosquito-pathogen trait responses"

description: Bayesian hierarchical model fits for the manuscript "Uncovering temperature sensitivity of West Nile virus transmission: novel computational approaches to mosquito-pathogen trait responses". <br><br>Code and data underlying these model fits are available from: https://github.com/julehe/WNV-temperature<br><br>A preprint version of our study can be found here: https://www.biorxiv.org/content/10.1101/2024.09.16.613097v1
DOI: 10.17632/82n5bjkz2c
title: Datos de la tesis: Modelación de la cinética de degradación de la lisina y formación de compuestos de la reacción de Maillard durante el secado por aspersión de proteínas del lactosuero obtenidas por membranas

description: Contiene los datos experimentales, modelos y códigos en Matlab y Excel necesarios para reproducir los resultados reportados en la tesis "Modelación de la cinética de degradación de la lisina y formación de compuestos de la reacción de Maillard durante el secado por aspersión de proteínas del lactosuero obtenidas por membranas" presentada para optar por el título de Doctor en Ciencias Farmacéuticas y Alimentarias de la Universidad de Antioquia.
DOI: 10.6084/m9.figshare.14988249.v1
title: PRISMA-P Checklist

description: PRISMA-P Checklist Protocol for a systematic review and meta-analysis: to investigate the association of adherence to plant-based diets with cardiovascular disease risk
DOI: 10.6084/m9.figshare.23770230.v1
title: Antibiotics under our feet: investigating antimicrobial resistance (Scotland)

description: The data analysis for this activity of "Antibiotics under our feet" was carried out in collaboration with four Nuffield Research Placement students at the University of St Andrews during the summer of 2023. These students are in the final year of their secondary education in Scotland. They were researching antimicrobial resistance and soil microbes.This dataset consists of a Krona chart visualisation of our bioinformatics results for our first six soil samples sent for DNA sequencing, and a spreadsheet collating and summarising the further information that they found out about unusual phenotypes of pathogens of concern identified in the supplementary material of the Scottish One Health Antimicrobial Use and Antimicrobial Resistance in 2021 Report. The report lists names of micro-organisms, the antimicrobial drug that resistance was identified to and the number of isolates in which this was seen. The students investigated more about the species of microbes, the diseases and conditions they cause, and the methods of actions of the antimicrobials drugs.The Krona chart was used to determine if these species of microbe were present in our soil samples. We are unable to provide any information on the phenotypes of species in our soil samples as the data was acquired through metagenomic sequencing not through the study of any isolates.An interactive human body with information from this dataset was created on the "Antibiotics under our feet" website as part of our public engagement output. Students selected their top 3 microbes of interest. The link to this is included below.
DOI: 10.6084/m9.figshare.19200254.v3
title: Single-cell and spatial transcriptome datasets

description: Single-cell and spatial transcriptome databases as well as the codes for analysing these data are stored. We refer the following papers and repositories: * Stewart et al., Nat. Cancer 1, 2020 * Reyes et al., Nat. Med. 26, 2020 * Moncada et al., Nat. Biotechnol. 38, 2020 * 10x Genomics repository
DOI: 10.6084/m9.figshare.7707185.v2
title: Holec et al. (2019).xls

description: <i>Formica rufa</i> and jewelweed <em>I. parviflora </em>interaction study <em>- </em>ant seed collection activity measurement, jewelweed plant parameters, and soil chemical parameters measurement compared to the surrounding soils
DOI: 10.6084/m9.figshare.7936724.v1
title: Single introductions of soil biota and plants generate long-term legacies in soil and plant community assembly

description: Plant and nematode community composition data from a field experiment. This shows responses of above-belowground community assembly in response to seed addition and/or soil inoculation over 20 years.
DOI: 10.6084/m9.figshare.19297730.v1
title: The push-pull intercrop Desmodium does not repel, but intercepts and kills pest

description: Raw data on volatile emission of greenhouse grown and field grown<i> Desmodium intortum</i> and <i>Zea mays </i>and supplementary information on chemical identification including synthetic standards used.Results of choice bioassays conducted with <i>Spdoptera frugiperda </i>larvae and ovipositing females. Survival data on <i>S. frugiperda </i>larvae feeding on maize or<i> Desmodium intortum.</i>
DOI: 10.6084/m9.figshare.24899943.v2
title: Phishing Email Curated Datasets

description: We have curated 7 repositories.The Ling and Enron datasets possess just two features: ‘Subject’ and ‘Body’. The other datasets consists of six features, namely ‘Sender’, ‘Receiver’, ‘Date’, ‘Subject’, ‘Body’, and ‘Urls’.<br>Please cite this dataset:<br>A. I. Champa, M. F. Rabbi, and M. F. Zibran, “Curated datasets and feature analysis for phishing email detection with machine learning,” in 3rd IEEE International Conference on Computing and Machine Intelligence (ICMI), 2024, pp. 1–7 (to appear).<br>or@inproceedings{champa2024curated,title={Curated Datasets and Feature Analysis for Phishing Email Detection with Machine Learning},author={Champa, Arifa I and Rabbi, Md Fazle and Zibran, Minhaz F},booktitle={3rd IEEE International Conference on Computing and Machine Intelligence (ICMI)},pages = {1--7 (to appear)},year={2024}}
DOI: 10.6084/m9.figshare.25146260
title: Single-cell transcriptomics reveal how root tissues adapt to soil stress

description: Land plants thrive in soils exhibiting vastly different properties and environmental stresses. Root systems can adapt to contrasting soil conditions and stresses, yet how their responses are programmed at the individual cell scale remains unclear. Using single-cell RNA-seq and spatial
transcriptomic approaches, we revealed major expression changes in outer root cell types with growth condition transition from gel to soils. These tissue-specific transcriptional responses are related to nutrient homeostasis, cell wall integrity and defence in response to heterogeneous soil versus homogeneous gel growth conditions. We also demonstrate how the model soil stress termed compaction triggers expression changes in cell wall remodelling and barrier formation in outer and inner root tissues, regulated by abscisic acid released from phloem cells. Our study reveals how root tissues communicate and adapt to contrasting soil conditions at single-cell resolution.
DOI: 10.6084/m9.figshare.25146260.v1
title: Single-cell transcriptomics reveal how root tissues adapt to soil stress

description: Land plants thrive in soils exhibiting vastly different properties and environmental stresses. Root systems can adapt to contrasting soil conditions and stresses, yet how their responses are programmed at the individual cell scale remains unclear. Using single-cell RNA-seq and spatial
transcriptomic approaches, we revealed major expression changes in outer root cell types with growth condition transition from gel to soils. These tissue-specific transcriptional responses are related to nutrient homeostasis, cell wall integrity and defence in response to heterogeneous soil versus homogeneous gel growth conditions. We also demonstrate how the model soil stress termed compaction triggers expression changes in cell wall remodelling and barrier formation in outer and inner root tissues, regulated by abscisic acid released from phloem cells. Our study reveals how root tissues communicate and adapt to contrasting soil conditions at single-cell resolution.