cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/4k2gr4wk7s
title: Data for: Cervical Cancer-Derived Exosomes Induce Neurite Outgrowth

description: These are the raw data of the PC12 assay. PC12 cells were stimulated with exosomes purified from various different cervical cancer cell lines. PC12 cells were stained with an anti-beta3-tubulin antibody and neurite outgrowth quantified. The positive control was PC12 cells treated with recombinant NGF (nerve growth factor) and negative control was untreated PC12 cells.
DOI: 10.3535/bk0-d3x-r3k
title: Tollichthys polaris Bystrow, 1957

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wzr-bq8-fgl
title: Tropinema haermae (Mark, 1953)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/ffb43ctvs3
title: Feeding the world beyond 2050: Leveraging Africa’s pig sector for sustainable food security

description: The pig sector in Africa, particularly its indigenous breeds, represents a crucial yet underutilized resource for food security and poverty alleviation among rural households. This study reviews the current status of Africa's pig sector, highlighting its contribution to rural livelihoods and food security through a comprehensive analysis of production systems and socio-economic impacts. Our study demonstrates that Africa’s pig sector, despite their current limitations, holds significant potential for enhancing food security across Africa. Through detailed analysis of regional production and consumption patterns, we show how this sector provides sustainable protein sources while requiring minimal input, making them particularly valuable for resource-limited households. This supplementary material presents consumption pattern of animal proteins globally.
DOI: 10.3535/t7a-sp0-8ys
title: Holonema J.E. Areschoug, 1855

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wyd-f4n-pcd
title: Holonema J.E. Areschoug, 1855

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/9dt8y58sb4
title: Data for: Cenozoic multi-phase deformation in the Qilian Shan and out-of-sequence development of the northern Tibetan Plateau

description: Compilation of Cenozoic tectonic events age datasets recorded in Qilian Shan.
DOI: 10.3535/5yq-e0v-exs
title: Holonema J.E. Areschoug, 1855

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w4q-f58-8kj
title: Holonema J.E. Areschoug, 1855

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28079897.v1
title: 索夫普

description: 实验比较揭示了整合核苷酸和深度编码特征的积极影响。此外，将底层模型的结果与集成学习框架集成有助于提高预测性能。结果表明，SORFPP 是鉴定 SEP 活性的可靠方法。
DOI: 10.6084/m9.figshare.5630071.v1
title: Vascular and tissue changes of magnetic susceptibility in the mouse brain after transient cerebral ischemia

description: This is reconstructed magnitude, phase images and quantitative susceptibility maps of mice brains from gradient recalled echo data collected at different time points after middle cerebral artery occlusion and reperfusion. The methods and results are described in our publication in Translational Stroke Research 2017. Data are in NIfTI format.
DOI: 10.3535/7da-991-t8p
title: Holonema J.E. Areschoug, 1855

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zyp-811-jfd
title: Luetkeichthys borealis Bystrow, 1957

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/05l-xll-wbd
title: Luetkeichthys borealis Bystrow, 1957

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/g4q-2vt-1cf
title: Holonema J.E. Areschoug, 1855

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d2p-3dp-yfh
title: Coccosteomorph

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zbc-h67-k6s
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2f5-ja6-0jp
title: Plantae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zmc-t7b-tjf
title: Plantae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/dzc4n7xfdr
title: MatEx_shortfiber_composites_review

description: Data the mechanical properties and microstructural features of short fiber-reinforced 3D-printed composites. The data is collected from published research articles.
DOI: 10.3535/m2v-nbf-mtm
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nc8-0ye-zrs
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z2p-d6v-f6j
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8sw-a9k-egm
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t1d-qav-vl0
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11359667.v1
title: 5-axis degree-of-freedom small animal imaging stage

description: This is a SolidWorks file for a 5-axis degree-of-freedom rotation/translation stage for small animal ophthalmic imaging. All custom and commercially available parts are included in the SolidWorks file.
DOI: 10.3535/mwj-yk8-cqx
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v5s-je4-fy9
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8lj-sw7-3qc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mhe-4gy-49h
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5n7-t15-fch
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26771416.v1
title: Religiosity and Meaning in Life among individuals recovering from alcoholism

description: Dataset on the study on religiosity and meaning in life among individuals recovering from alcohol use disorder in Kerala, India.
DOI: 10.17632/rs6ysvgw8h
title: Insights into the evolution and hypoglycemic metabolite biosynthesis of autotetraploid Cyclocarya paliurus by combining genomic, transcriptomic and metabolomic analyses

description: C. paliurus is an endangered medicinal plant of the genus Cyclocarya within the family Juglandaceae, and its leaves have been widely used for the development of healthy tea and medicine with a variety of pharmacologically bioactive components. This is the first report of an ~634.90-Mb chromosome-level haploid genome assembly of heterozygous autotetraploid C. paliurus (2n=4x=64 chromosomes) with 46,292 protein-coding genes; 95.78% (contigs) of the assembled genome was successfully anchored to 16 chromosomes. The estimated results for contig N50 (34.21 Mb), BUSCO (91.0%) and EST (95.52%) showed a high continuity and integrity of the assembled haploid genome. The phylogenetic tree showed that C. paliurus had a close relationship to J. sigillata, J. regia and C. illinoinensis and phylogenetically diverged from the common ancestor (Juglandales) approximately 24 million years ago (Mya). Comparative genome analysis indicated that only one recent WGD event in C. paliurus was distinct from the juglandoid WGD event and occurred from 3.22-4.86 Mya. Whole transcriptome analysis showed that most differentially expressed (DE)-RNAs were significantly enriched in plant hormone signal transduction and plant-pathogen interactions. A total of 626 differentially accumulated metabolites (DAMs) and 6,138 DE-mRNAs were identified and were mainly involved in steroid, flavonoid and polysaccharide biosynthesis in C. paliurus leaves. Metabolomics and transcriptomics data showed that most of the genes related to hypoglycemic metabolite biosynthesis in the 10M-YL and 10M-ML groups were significantly higher than those in the 10M-OL group, including CpHMGS, CpMVK, CpMVD, CpCMK, CpDXS, CpC4Hs, CpCHIs, CpF3Hs, CpF3’5’H, CpDFRs, CpANS, CpFK, CpmanA, CpmanB, CpRHM, and CpUXE, suggesting a strong correlation between the DAMs and DEGs in hypoglycemic metabolite biosynthesis. These findings can help improve the understanding of the molecular mechanism of hypoglycemic metabolites in leaves with different maturities in C. paliurus and provide a theoretical basis and technical support for the development and utilization of C. paliurus.
DOI: 10.3535/4a0-wwn-b4a
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/enf-4ct-ltq
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/5kkykdbs39
title: Supporting information- Integration of urban ecosystem-based adaptation in Nepal: A policy landscape analysis

description: Ecosystem-based adaptation (EbA) is an ecologically sensitive, cost-effective, and locally adaptive climate adaptation strategy to strengthen the climate resilience of vulnerable communities. While many studies on EbA have been conducted in rural and mountainous regions or within the natural sciences realm, there is a lack of comprehensive research that assesses how urban EbA measures have been incorporated into existing policies and plans in Global South, including in Nepal. Ecosystem-based adaptation is in the early stages of its establishment as a fundamental component to address climate adaptation and sustainable development in urban environments. Accordingly, effective integration strategies, challenges, potential focal areas, and entry points have yet to be extensively studied. To address the literature gap, this paper analyses the types of EbA interventions and the extent of urban EbA integration within Nepal’s climate, urban, and sectoral policies and plans. Direct content analysis and a qualitative scoring system were used to evaluate the plan components and assess the level of EbA integration. The findings indicate that the policies and plans recognise the importance of conserving, enhancing, and managing ecosystems for climate change adaptation, and EbA measures are mainly included in action-oriented sections. However, the results also reveal inadequate EbA integration, particularly in the information base, vision and objectives, and implementation aspects. The implementation component notably lacks comprehensive provisions for budget allocation, responsible authorities, definite timelines, and clear roadmaps. The breakdown of EbA integration in the policies and plans suggests that climate and urban plans substantially integrate urban EbA measures, but discrepancies exist with climate and urban policies and sectoral policies and plans. These findings collectively emphasise a pressing need to enhance the recognition and integration of urban EbA measures within policy frameworks with a view towards strengthening climate resilience and mitigating climate-related hazards in urban environments.
DOI: 10.3535/5fr-0re-6a2
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w3j-rky-nfk
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2ej-2pc-ccn
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/68f-dsx-q4c
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/3nnsyxdsvd
title: Media and Cell Line Dictionaries

description: These files are supplementary data for the submitted manuscript "Co-occurrence of Cell Lines, Basal Media and Supplementation in the Biomedical Research Literature". The file 'cellDictionary.csv' contains a dictionary of the cell lines used to annotate our corpus, with a column for the cell line and their synonyms. This is adapted from Cellosaurus, Version 29. The file 'mediaDictionary.csv' contains a dictionary of curated basal medias and their synonyms.
DOI: 10.3535/90n-w0r-jsl
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9j6-d0g-nx5
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28612352.v1
title: Dataset 2: Primate MD2 cDNA sequences

description: Primate aligned coding sequences for MD2 (myeloid differentiation factor 2 or lymphocyte antigen 96). Sequences were obtained by searching up the protein for each species on Uniprot, and using TBLASTN to find coding DNA sequences. Coding sequences were selected based on the lowest e-value in BLAST, and sequences were aligned with MUSCLE in AliView. Labeling format is location (Africa, Asia, South America, or Madagascar) followed by scientific name of the species.
DOI: 10.17632/vzz2xp4fm8
title: LINF_090010800

description: Phospholipid acyltransferase; Leishmania infantum (strain JPCM5)
DOI: 10.3535/0eq-pe4-59x
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/91r-ye3-b9l
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3719803_d6.v1
title: Additional file 6: of A fast and efficient python library for interfacing with the Biological Magnetic Resonance Data Bank

description: Fragments of failed NMR-STAR 2.1 files for PyStarLib. (TXT 16 kb)
DOI: 10.3535/pak-may-z6g
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wer-1rp-a8c
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28478978.v1
title: NHMP Cleaned Datasets

description: a prepared and cleaned dataset taken from the National Homicide Monitoring Programme for the purpose of use in an assignment for university
DOI: 10.3535/67m-h8x-5tr
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/slh-fcc-kaf
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3564423.v1
title: Appendix A. Local uses of native tree species in the North Negros Natural Park.

description: Local uses of native tree species in the North Negros Natural Park.
DOI: 10.3535/x8b-nbz-a7e
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.647569.v1
title: CIL:34924

description: Localization of cross-linking proteins in fibroblast cytoskeleton. Fluorescence microscopy and corresponding intensity profiles of Xenopus fibroblast lamellipodia double stained with TRITC-phalloidin (red) and α-actinin antibodies (green). The protein/actin ratio at the leading edge of the lamellipodium is low for α-actinin compared with internal actin structures. Immuno-EM of the cell edge (CIL 34927) or interior (CIL 34930) of cytochalsin D-treated Xenopus fibroblasts stained with α-actinin ( primary antibody and 18-nm gold-conjugated secondary antibody) reveals α-actinin at filament crossovers in the cell interior. Image corresponds to Figure 5c and c' from J Cell Biol. 1999 May 31;145(5):1009-26.
DOI: 10.17632/5wrjj97nbz
title: TPMD toolkit: A toolkit for studying rate processes using molecular dynamics trajectories and performing temperature programmed molecular dynamics calculations

description: A set of basic components needed for the analysis of state-to-state transitions in molecular dynamics (MD) trajectories is provided in the form of a toolkit. The toolkit can be used to (a) determine long-lived states of the system, (b) identify mechanism for transition from one state to another by listing atoms that participate in the transition, and (c) calculate kinetic parameters associated with the rate process, e.g., rate constants and Arrhenius parameters. Additionally, the toolkit enables the study of rare kinetic events using the temperature programmed MD (TPMD) method. Results obtained with two prototype systems, namely, Ag trimer diffusion, and Li diffusion in LiFePO_4, are discussed to illustrate the application of the toolkit.
DOI: 10.17632/w4p3h6kvyx
title: Molecular dynamics simulation program of order N for condensed matter I. MDPYRS1: scalar pyramid, short-range interactions

description: Abstract A program for molecular dynamics simulation in which the cpu time proportionally to the number of particles N is presented. The program enables one to stimulate efficiently very large condensed-matter systems involving short-range interactions (e.g. simple liquids with pairwise-additive forces). The program is optimized for serial computers and it does not involve any neighbour lists, so it requires relatively small computer memory. Title of program: MDPYRS1 Catalogue Id: ABRW_v1_0 Nature of problem Study of the thermodynamic, structural and dynamic properties of liquids or solids. Versions of this program held in the CPC repository in Mendeley Data ABRW_v1_0; MDPYRS1; 10.1016/0010-4655(90)90079-G This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.3535/knd-0kf-rey
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ktr-epe-pg1
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t59-gfx-0y1
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/07n-qtw-fxn
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rd6-ar9-pf2
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9gw-3w1-q4b
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gw0-8rd-lc9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2kw-l7x-vds
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8p0-z4r-g0f
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5061/dryad.cb43g0n
title: Data from: Experimental test of birdcall detection by autonomous recorder units and by human observers using broadcast
DOI: 10.3535/f87-g95-ydn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fvv-zba-2ca
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25826104.v1
title: Numerical case setup parameters in Manuscript #2024WR037852

description: This dataset contains the input paramaters for verification case and investigation cases in Manuscript #2024WR037852. There are two files in this dataset, one is the parameters for the verification case and the other one is for the investigation case.
DOI: 10.17632/7yhhgk6jbg
title: Zn K-edge XAFS Spectra of Clays

description: We provide two Zn K-edge XAFS spectra of kaolinite (KGa-1b; 8 ppm Zn) and montmorillonite (SAz-1; 60 ppm Zn) from the Source Clays Repository. The first column of the data is photon energy (eV) and the second column is fluorescence μ(E).
DOI: 10.17632/grjfkkbbdx
title: RELATIONSHIP BETWEEN INDIAN FOREX RESERVES AND RUSSIA-UKRAINE CRISIS: AN EMPIRICAL STUDY

description: This paper empirically investigates the relationship between the foreign exchange (Forex) reserves of India and the Russia-Ukraine crisis. To pursue this study, we have considered weekly data of Forex reserves of India and have constructed a dummy on the Russia-Ukraine crisis from January 1, 2021, to October 14, 2022, with 92 observations where January 1, 2021, to February 18, 2022, represents the time period before the crisis denoted by ‘0’ and February 25, 2022, to October 14, 2022, is considered as the time period during the crisis denoted by ‘1’. The descriptive statistics indicate the normality of the data. The Phillips-Perron (PP) unit root test further indicates the non existence of unit root within the select variables. Further, the dummy regression model indicates that there persists in a negative relationship between Forex reserves and the Russia-Ukraine crisis. Moreover, there remains a noteworthy short-run and long-run causality between Forex reserves and the Russia-Ukraine crisis. As a result, it is argued that as India is one of Russia’s and Ukraine’s main trading partners, any unrest there will undoubtedly have an influence on bilateral commerce, which will then have an impact on India’s foreign income receipts. This would cause difficulties for India’s
foreign currency (Forex) reserves, as shown in this analysis. In order to lessen the effects of the crisis and put a check on the balance of payments, it is advised that India look for alternative nations trading in comparable goods and services and that sufficient steps be taken to produce those goods and services locally that are imported from Russia and Ukraine.
DOI: 10.17632/xkh45t8dmm
title: NEURON fit results for single-neuron models with distinct axon-myelin circuits

description: Raw data for Figure 1 (single- versus double cable) as well as additional circuit implementations. The numbers reflect optimized solutions for various electrical parameters. The columns "error-soma" and "error-axon" are showing the total mean square error (MSE) for each current injection with respect to the experimentally recorded subthreshold voltage transients. Cells #1 to #6 are each within different worksheets. Row titles are listing the distinct circuit implementations. The hypothesis is that the lowest mean square error solution provides an objective measure to assess which local circuit is present within the internodes.
DOI: 10.3535/27p-dwv-4f2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ats-kkd-esy
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/he0-q4c-jaz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.