cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26678501.v1
title: Additional file 1 of DNA hypomethylation promotes the expression of CASPASE-4 which exacerbates inflammation and amyloid-β deposition in Alzheimer’s disease

description: Additional file 1: Supplementary Figure 1. Microglial cells express high levels of Casp4 within mouse brains. A) UMAP visualization of brain cell meta-clusters identified in single-nucleus RNA-sequencing analysis of female mouse brain tissues (GSE207848). UMAP plots showing high RNA expression levels of Casp4 (B) and Cx3cr1 (C) within microglial cells from mouse brain tissues. Supplementary Figure 2. Fibrillar Aβ(1-42) does not prime the inflammasome response or promote cell death. A) IL-1β release from resting macrophages treated for 3 hours with 10µM fibrillar-Aβ (fAβ) or not treated (NT) with and without conjugation to cytosolic delivery reagent Profect or with LPS control followed by 30-minute activation with 5mM ATP (N=4 or N=3 for LPS only). Statistical analysis completed by mixed effects analysis with Tukey’s multiple comparisons test. B) Cell death measured by % LDH release (relative to high control) from LPS-primed mouse macrophages treated for 3 hours with 10µM fibrillar-Aβ with and without Profect, Statistical analysis completed by 2way ANOVA Tukey’s multiple comparisons test (N=5). Supplementary Figure 3. The NLRP3 inflammasome promotes IL-1β release in response to Profect-conjugated-Fibrillar Aβ(1-42). A) IL-1β release from LPS-primed macrophages from wild-type (WT) and nlrp3-/- mice treated for 3 hours with 10µM fibrillar-Aβ or not treated (NT) with and without conjugation to Profect (N=3). B) Representative immunoblots for NLRP3, CASP11, ASC, Pro-IL1β and loading control GAPDH from macrophages lysates treated with Profect-conjugated fibrillar-Aβ (fAβ) or Profect alone (NT) as in Figure 6A (N=2). Statistical analysis completed by 2way ANOVA Tukey’s multiple comparisons test. For simplicity, graph does not display p-values for all comparisons. *P ≤ 0.05, **P ≤ 0.01. Supplementary Figure 4. Expression of inflammasome components in the hippocampus of 5xFAD and 5xFAD/Casp4-/- mice. Immunoblots for CASP1, cleaved CASP1, ASC, Pro-IL1β and GAPDH loading control in hippocampal lysate from 7-month-old littermate Casp4-/- and 5xFAD/Casp4-/- mice and corresponding densitometry above background graphs (N=4). Statistical analysis completed by student’s t-test. Supplementary Figure 5. Full immunoblot staining for figures as indicated. Exposure times may vary from figure to best represent full antibody staining.
DOI: 10.6084/m9.figshare.26678504
title: Additional file 2 of DNA hypomethylation promotes the expression of CASPASE-4 which exacerbates inflammation and amyloid-β deposition in Alzheimer’s disease

description: Additional file 2: Supplementary Table 1. Overlap of gene lists with FDR&lt;0.05 when comparing male vs. female mice in a single group. Supplementary Table 2. The patient demographic and clinical characteristics of the human samples used in the study. Samples used for methylation analysis are marked in the DMR column. Y: years, BA: Brodmann’s area, h: hours, M: male, F: female, W: White, H: Hispanic, AA: African American, CASP4 DMR: CASP4 differentially methylated region.
DOI: 10.6084/m9.figshare.26678504.v1
title: Additional file 2 of DNA hypomethylation promotes the expression of CASPASE-4 which exacerbates inflammation and amyloid-β deposition in Alzheimer’s disease

description: Additional file 2: Supplementary Table 1. Overlap of gene lists with FDR&lt;0.05 when comparing male vs. female mice in a single group. Supplementary Table 2. The patient demographic and clinical characteristics of the human samples used in the study. Samples used for methylation analysis are marked in the DMR column. Y: years, BA: Brodmann’s area, h: hours, M: male, F: female, W: White, H: Hispanic, AA: African American, CASP4 DMR: CASP4 differentially methylated region.
DOI: 10.6084/m9.figshare.26678507
title: Additional file 3 of DNA hypomethylation promotes the expression of CASPASE-4 which exacerbates inflammation and amyloid-β deposition in Alzheimer’s disease

description: Additional file 3: Supplementary Data 1. Filtered DMR list from RRBS. Supplementary Data 2. RNA sequencing, AD/Casp4 KO vs WT.
DOI: 10.15468/dl.n1istk
title: Occurrence Download

description: A dataset containing 1554784 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Crataegus laevigata (Poir.) DC., Heracleum mantegazzianum Sommier & Levier, Hieracium amplexicaule L., Hieracium diaphanoides Lindeb., Hieracium glaucinum Jord., Hieracium lachenalii Suter, Hieracium maculatum Schrank, Hieracium murorum L., Hieracium pilosum Schleich. ex Froel., Hieracium prenanthoides L., Hieracium sabaudum L., Hieracium schmidtii Tausch, Hieracium umbellatum L., Hieracium vulgatum Spreng., Oenanthe aquatica (L.) Poir., Oenanthe fistulosa L., Oenanthe fluviatilis (Bab.) Coleman, Oenanthe lachenalii C.C.Gmel., Oenanthe pimpinelloides L., Oenanthe silaifolia M.Bieb., Oenothera biennis L., Oenothera ×cambrica Rostanski, Oenothera ×fallax Renner, Oenothera parviflora L., Oxalis articulata Savigny, Oxalis corniculata L., Oxalis debilis Kunth, Oxalis exilis A.Cunn., Oxalis incarnata L., Oxalis latifolia Kunth, Primula acaulis (L.) L., Primula elatior (L.) L., Primula farinosa L., Ranunculus aconitifolius L., Ranunculus aquatilis L., Ranunculus arvensis L., Ranunculus auricomus L. & W.Koch, Ranunculus circinatus Sibth., Ranunculus fluitans Lam., Ranunculus hederaceus L., Ranunculus lingua L., Ranunculus omiophyllus Ten., Ranunculus ophioglossifolius Vill., Ranunculus paludosus Poir., Ranunculus parviflorus L., Ranunculus peltatus Schrank, Ranunculus penicillatus (Dumort.) Bab., Ranunculus reptans L., Ranunculus sardous Crantz, Ranunculus trichophyllus Chaix, Ranunculus tripartitus DC., Ranunculus auricomus L. & W.Koch)"
 ]
}

 The dataset includes 1554784 records from 1632 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008424-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mtrkm5
title: Occurrence Download

description: A dataset containing 2906892 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-36.69434 -10.48781,-43.02246 -7.36247,-49.1748 -8.32021,-51.45996 -12.98315,-51.37207 -17.30869,-48.20801 -20.22097,-45.04395 -22.59373,-43.72559 -23.16056,-40.20996 -22.43134,-38.97949 -18.7295,-36.69434 -10.48781))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1901-2020"
 ]
}

 The dataset includes 2906892 records from 930 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081922-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3uwswa
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Locality is Arauquita"
 ]
}

 The dataset includes 19 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008516-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d3atvc
title: Occurrence Download

description: A dataset containing 15224 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chelon labrosus (Risso, 1827)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Material sample)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 15224 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008515-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xhr6kh
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elegia acockii (Pillans) Moline & H.P.Linder"
 ]
}

 The dataset includes 66 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033664-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xu4wru
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bulbophyllum fascinator (Rolfe) Rolfe"
 ]
}

 The dataset includes 22 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075421-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tmcp5k
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senegalia pteridifolia (Benth.) Seigler & Ebinger"
 ]
}

 The dataset includes 26 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010131-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.96hs4b
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bulbophyllum fenixii Ames"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075445-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kba6dj
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Cyanoramphus unicolor (Lear, 1831)"
 ]
}

 The dataset includes 142 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033685-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2y99dr
title: Occurrence Download

description: A dataset containing 1519 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Tinamotis pentlandii Vigors, 1837"
 ]
}

 The dataset includes 1519 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053469-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.psny5n
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cananga odorata (Lam.) Hook.f. & Thomson",
 "Country is Indonesia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 58 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010131-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kegt42
title: Occurrence Download

description: A dataset containing 269 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Harrisia pomanensis (F.A.C.Weber ex K.Schum.) Britton & Rose"
 ]
}

 The dataset includes 269 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033669-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mtdmfk
title: Occurrence Download

description: A dataset containing 8697798 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence, Material sample, Material citation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta",
 "Year 2018-2018"
 ]
}

 The dataset includes 8697798 records from 1336 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033676-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mpjznk
title: Occurrence Download

description: A dataset containing 3915 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Thomandersiaceae)"
 ]
}

 The dataset includes 3915 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021263-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5ctvg
title: Occurrence Download

description: A dataset containing 8829 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Alseuosmiaceae)"
 ]
}

 The dataset includes 8829 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021265-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cr2s8f
title: Occurrence Download

description: A dataset containing 4305 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Montiniaceae)"
 ]
}

 The dataset includes 4305 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021264-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5pu57
title: Occurrence Download

description: A dataset containing 18859 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Nepenthaceae)"
 ]
}

 The dataset includes 18859 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021266-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kxnzxj
title: Occurrence Download

description: A dataset containing 391 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-73.94467 40.74357,-73.94463 40.74256,-73.94523 40.74106,-73.94533 40.74033,-73.94467 40.73883,-73.94511 40.73854,-73.94488 40.73785,-73.9441 40.73751,-73.94279 40.73687,-73.94149 40.73612,-73.94039 40.73509,-73.94005 40.73539,-73.9398 40.73578,-73.94095 40.73676,-73.94131 40.7371,-73.94277 40.73799,-73.94406 40.73893,-73.9444 40.73979,-73.9441 40.74117,-73.94294 40.7435,-73.94316 40.74409,-73.94467 40.74357))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 391 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021268-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e218541
title: 2001 Residential Financial Survey

description: The 2001 Residential Finance Survey (RFS) was sponsored by the Department of Housing and Urban Development (HUD) and conducted by the Census Bureau. The RFS is a follow-on survey to the 2000 decennial census designed to collect, process, and produce information about the financing of all nonfarm, residential properties. Previous RF surveys have been integral parts of the decennial censuses since 1950. Primary users of RFS data in addition to HUD include the Bureau of Economic Analysis, Fannie Mae and Freddie Mac, and the Congress. Data are collected, tabulated, and presented for properties, the standard unit of reference for financial transactions related to housing. In the RFS, a property is defined as all the buildings and land covered by a single first mortgage. The sample for the RFS is stratified by property size, with large properties overrepresented in the sample. Very large properties are selected with certainty to control their effect on the reliability of the estimates. The RFS is the only standardized single source of detailed information on property, mortgage, and financial characteristics for multiunit properties. Both property owners and mortgage lenders are interviewed, resulting in more accurate information on property and mortgage characteristics. As part of the decennial census, the RFS is mandatory. This is important in collecting information from mortgage lenders.
DOI: 10.3886/e218541v1
title: 2001 Residential Financial Survey

description: The 2001 Residential Finance Survey (RFS) was sponsored by the Department of Housing and Urban Development (HUD) and conducted by the Census Bureau. The RFS is a follow-on survey to the 2000 decennial census designed to collect, process, and produce information about the financing of all nonfarm, residential properties. Previous RF surveys have been integral parts of the decennial censuses since 1950. Primary users of RFS data in addition to HUD include the Bureau of Economic Analysis, Fannie Mae and Freddie Mac, and the Congress. Data are collected, tabulated, and presented for properties, the standard unit of reference for financial transactions related to housing. In the RFS, a property is defined as all the buildings and land covered by a single first mortgage. The sample for the RFS is stratified by property size, with large properties overrepresented in the sample. Very large properties are selected with certainty to control their effect on the reliability of the estimates. The RFS is the only standardized single source of detailed information on property, mortgage, and financial characteristics for multiunit properties. Both property owners and mortgage lenders are interviewed, resulting in more accurate information on property and mortgage characteristics. As part of the decennial census, the RFS is mandatory. This is important in collecting information from mortgage lenders.
DOI: 10.15468/dl.s5zfjq
title: Occurrence Download

description: A dataset containing 1082 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Kirkiaceae)"
 ]
}

 The dataset includes 1082 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021270-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rajx8n
title: Occurrence Download

description: A dataset containing 18339 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Opiliaceae)"
 ]
}

 The dataset includes 18339 records from 480 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021271-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.catvmu
title: Occurrence Download

description: A dataset containing 23591 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Rousseaceae)"
 ]
}

 The dataset includes 23591 records from 108 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021272-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ca32mk
title: Occurrence Download

description: A dataset containing 48363956 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "DatasetKey is EOD – eBird Observation Dataset"
 ]
}

 The dataset includes 48363956 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021258-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g335x7
title: Occurrence Download

description: A dataset containing 909 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Rafflesiaceae)"
 ]
}

 The dataset includes 909 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021273-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8m9wm6
title: Occurrence Download

description: A dataset containing 13698 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Cephalotaxaceae)"
 ]
}

 The dataset includes 13698 records from 430 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021275-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xymacb
title: Occurrence Download

description: A dataset containing 69484 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Ruppiaceae)"
 ]
}

 The dataset includes 69484 records from 740 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021274-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ewmw73
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is IDN.32.14_1",
 "IucnRedListCategory is EN",
 "OccurrenceStatus is Present",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015819-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z6yjkk
title: Occurrence Download

description: A dataset containing 63440 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oncaeidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 63440 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015817-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.