cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12601051
title: Effect of vaccination on the use of antimicrobial agents: a systematic literature review

description: Antimicrobial resistance is a growing global health threat. To preserve the effectiveness of antimicrobials, it is important to reduce demand for antimicrobials. The objective of the study was to screen the existing peer-reviewed literature to identify articles that addressed the potential impact of influenza or <i>Pneumococcus</i> vaccination on antibiotic usage. <b>Data sources:</b> PubMed, Embase <b>Study eligibility criteria:</b> Clinical studies where antimicrobial prescribing was assessed in both vaccinated and unvaccinated populations. <b>Participants and interventions:</b> All patient populations were included (infants, children, adults and elderly), where the effects of the intervention (vaccination) was assessed We identified unique 3638 publications, of which 26 were judged to be of sufficiently high quality to allow the calculation of the potential impact of vaccination. Of these studies 23/26 found a significant reduction in antibiotic use by at least one of the parameters assessed. Different measures used to define anti-microbial use, studies typically focus on specific risk groups and most studies are from high-income countries. <b>Conclusions and implications of key findings:</b> Despite the limitations of the review, the evidence indicates that improved coverage with existing vaccines may significantly reduce antimicrobial demand. This suggests it may be a valuable tool for antimicrobial stewardship.Key messagesWhile vaccines against a number of pathogens have been studied for their ability to reduce antimicrobial use, currently only vaccination against influenza or pneumococcus has generated sufficient data for analysisVaccination against either influenza or pneumococcus significantly reduced overall antimicrobial prescribing rates, both in vaccinated individuals and at a population levelMaintaining and expanding vaccination coverage thus appears to be a key tool for antimicrobial stewardship While vaccines against a number of pathogens have been studied for their ability to reduce antimicrobial use, currently only vaccination against influenza or pneumococcus has generated sufficient data for analysis Vaccination against either influenza or pneumococcus significantly reduced overall antimicrobial prescribing rates, both in vaccinated individuals and at a population level Maintaining and expanding vaccination coverage thus appears to be a key tool for antimicrobial stewardship
DOI: 10.6084/m9.figshare.12601051.v1
title: Effect of vaccination on the use of antimicrobial agents: a systematic literature review

description: Antimicrobial resistance is a growing global health threat. To preserve the effectiveness of antimicrobials, it is important to reduce demand for antimicrobials. The objective of the study was to screen the existing peer-reviewed literature to identify articles that addressed the potential impact of influenza or <i>Pneumococcus</i> vaccination on antibiotic usage. <b>Data sources:</b> PubMed, Embase <b>Study eligibility criteria:</b> Clinical studies where antimicrobial prescribing was assessed in both vaccinated and unvaccinated populations. <b>Participants and interventions:</b> All patient populations were included (infants, children, adults and elderly), where the effects of the intervention (vaccination) was assessed We identified unique 3638 publications, of which 26 were judged to be of sufficiently high quality to allow the calculation of the potential impact of vaccination. Of these studies 23/26 found a significant reduction in antibiotic use by at least one of the parameters assessed. Different measures used to define anti-microbial use, studies typically focus on specific risk groups and most studies are from high-income countries. <b>Conclusions and implications of key findings:</b> Despite the limitations of the review, the evidence indicates that improved coverage with existing vaccines may significantly reduce antimicrobial demand. This suggests it may be a valuable tool for antimicrobial stewardship.Key messagesWhile vaccines against a number of pathogens have been studied for their ability to reduce antimicrobial use, currently only vaccination against influenza or pneumococcus has generated sufficient data for analysisVaccination against either influenza or pneumococcus significantly reduced overall antimicrobial prescribing rates, both in vaccinated individuals and at a population levelMaintaining and expanding vaccination coverage thus appears to be a key tool for antimicrobial stewardship While vaccines against a number of pathogens have been studied for their ability to reduce antimicrobial use, currently only vaccination against influenza or pneumococcus has generated sufficient data for analysis Vaccination against either influenza or pneumococcus significantly reduced overall antimicrobial prescribing rates, both in vaccinated individuals and at a population level Maintaining and expanding vaccination coverage thus appears to be a key tool for antimicrobial stewardship
DOI: 10.5281/zenodo.4740849
title: Code and Data Set for PeerJ manuscript, "3D Point Cloud lossy compression using Quadric Surfaces"(57825)

description: This is the code used in the said article
DOI: 10.5281/zenodo.4740848
title: Code and Data Set for PeerJ manuscript, "3D Point Cloud lossy compression using Quadric Surfaces"(57825)

description: This is the code used in the said article
DOI: 10.5281/zenodo.4740788
title: Simulation of a Lo/Ld phase coexistence in a DPPC/DOPC/Cholesterol mixture with additional POPC

description: to be added.
DOI: 10.5281/zenodo.4740787
title: Simulation of a Lo/Ld phase coexistence in a DPPC/DOPC/Cholesterol mixture with additional POPC

description: to be added.
DOI: 10.5281/zenodo.4740734
title: Heterochromatin Extension: A Possible Cytogenetic Fate of Primary Amenorrhea along with Normal Karyotype

description: Cessation of menses or complete absence of menses in females of age 14 is termed as primary amenorrhea (PA), a common consequence of utero-vaginal malfunction. Females develop phenotypic expressions as short stature, undeveloped breast or shield chest, poor tanner stage, hirsutism, an increase in carrying angle etc. These are the common features of Turner’s syndrome also where karyotyping is essential for PA females. This study reveals the consequence against Turner’s Syndrome in case of PA. There is a heterochromatin extension as a type of polymorphism in ch-9 and ch-16. 178 primary amenorrhoeic females were studied. A total of 10.11% primary amenorrhoeic females were found with heterochromatin extension (46, XX, 9qh<sup>+</sup> : 8 and 46, XX, 16qh<sup>+</sup> : 10). As there is a similarity in phenotype for Turner’s syndrome karyotype and normal karyotype with heterochromatin extension, hormonal estimation was done to find whether hormones change the phenotypes or not. Gonadotropins work on the development of ovaries that is not important for the normal growth of body or regulate BMI. In case of Turner, serum concentration of Follicle Stimulating Hormone and Luteinizing Hormone increase than the normal individual. Further study may reveal the association of heterochromatin extension along with ovarian development.
DOI: 10.5281/zenodo.4740733
title: Heterochromatin Extension: A Possible Cytogenetic Fate of Primary Amenorrhea along with Normal Karyotype

description: Cessation of menses or complete absence of menses in females of age 14 is termed as primary amenorrhea (PA), a common consequence of utero-vaginal malfunction. Females develop phenotypic expressions as short stature, undeveloped breast or shield chest, poor tanner stage, hirsutism, an increase in carrying angle etc. These are the common features of Turner’s syndrome also where karyotyping is essential for PA females. This study reveals the consequence against Turner’s Syndrome in case of PA. There is a heterochromatin extension as a type of polymorphism in ch-9 and ch-16. 178 primary amenorrhoeic females were studied. A total of 10.11% primary amenorrhoeic females were found with heterochromatin extension (46, XX, 9qh<sup>+</sup> : 8 and 46, XX, 16qh<sup>+</sup> : 10). As there is a similarity in phenotype for Turner’s syndrome karyotype and normal karyotype with heterochromatin extension, hormonal estimation was done to find whether hormones change the phenotypes or not. Gonadotropins work on the development of ovaries that is not important for the normal growth of body or regulate BMI. In case of Turner, serum concentration of Follicle Stimulating Hormone and Luteinizing Hormone increase than the normal individual. Further study may reveal the association of heterochromatin extension along with ovarian development.
DOI: 10.15468/bercp6
title: New genus and new species of the subfamilyMetrodorinae from China (Orthoptera Tetrigidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lu, Xiang-Yi, Deng, Wei-An (2021): New genus and new species of the subfamilyMetrodorinae from China (Orthoptera Tetrigidae). Zootaxa 4964 (2): 345-362, DOI: https://doi.org/10.11646/zootaxa.4964.2.6
DOI: 10.5281/zenodo.4741001
title: DATASET - MLPA FOLLOWED BY TARGET-NGS TO DETECT MUTATIONS IN THE DYSTROPHIN GENE OF PERUVIAN PATIENTS SUSPECTED OF DMD/DMB

description: This record contains figures and tables related to the manuscript: "MLPA FOLLOWED BY TARGET-NGS TO DETECT MUTATIONS IN THE DYSTROPHIN GENE OF PERUVIAN PATIENTS SUSPECTED OF DMD/DMB". Abstract<br> Background: We report the molecular analysis of the DMD gene in a group of Peruvian patients with Duchenne/Becker dystrophinopathy. This is the first study to thoroughly characterize mutations in this population.<br> Methods: We used the combination of multiplex ligation-dependent probe amplification (MLPA) and sequencing analysis of the DMD gene. We recruited Peruvian patients in a two-year period from reference national hospitals. We performed DNA tests in 152 patients, checking first exon deletion/duplication by MLPA, and subsequently, if negative, samples were sequenced to detect point mutations.<br> Results: The average of age for diagnosis was 9.8 years, suggesting a delay for timely diagnosis and care. We found causal DMD mutations in 125 patients: 72 (57.6%) exon deletions/duplications (41.6% deletions, 16.0% duplications) and 53 (42.4%) point mutations (27.2% nonsense, 9.6% small indels, and 5.6% splice site). <br> Conclusion: Due to our genetic background, we expected a higher number of novel and recurrent causal mutations in our sample. Results showed 16% of novel mutations, similar to other well studied populations.
DOI: 10.5281/zenodo.4741000
title: DATASET - MLPA FOLLOWED BY TARGET-NGS TO DETECT MUTATIONS IN THE DYSTROPHIN GENE OF PERUVIAN PATIENTS SUSPECTED OF DMD/DMB

description: This record contains figures and tables related to the manuscript: "MLPA FOLLOWED BY TARGET-NGS TO DETECT MUTATIONS IN THE DYSTROPHIN GENE OF PERUVIAN PATIENTS SUSPECTED OF DMD/DMB". Abstract<br> Background: We report the molecular analysis of the DMD gene in a group of Peruvian patients with Duchenne/Becker dystrophinopathy. This is the first study to thoroughly characterize mutations in this population.<br> Methods: We used the combination of multiplex ligation-dependent probe amplification (MLPA) and sequencing analysis of the DMD gene. We recruited Peruvian patients in a two-year period from reference national hospitals. We performed DNA tests in 152 patients, checking first exon deletion/duplication by MLPA, and subsequently, if negative, samples were sequenced to detect point mutations.<br> Results: The average of age for diagnosis was 9.8 years, suggesting a delay for timely diagnosis and care. We found causal DMD mutations in 125 patients: 72 (57.6%) exon deletions/duplications (41.6% deletions, 16.0% duplications) and 53 (42.4%) point mutations (27.2% nonsense, 9.6% small indels, and 5.6% splice site). <br> Conclusion: Due to our genetic background, we expected a higher number of novel and recurrent causal mutations in our sample. Results showed 16% of novel mutations, similar to other well studied populations.
DOI: 10.15468/88svmt
title: First study of the Polycladida (Rhabditophora, Platyhelminthes) from the Pacific Coast of Costa Rica

description: This dataset contains the digitized treatments in Plazi based on the original journal article Soutullo, Patricia, Cuadrado, Daniel, Noreña, Carolina (2021): First study of the Polycladida (Rhabditophora, Platyhelminthes) from the Pacific Coast of Costa Rica. Zootaxa 4964 (2): 363-381, DOI: https://doi.org/10.11646/zootaxa.4964.2.7
DOI: 10.6084/m9.figshare.14550924.v1
title: Fig. S1.pdf Ratner_endo_revision

description: Figure S1: Heatmap of duodenal microbiota profiles in wt and ko NTSR1 mice undergoing sham or VSG surgeries. 11 ASV presented significantly different relative abundances between groups (adjusted p&lt;0.05, Wald test). The color scale indicates taxa relative abundance.<br>
DOI: 10.6084/m9.figshare.14550924
title: Fig. S1.pdf Ratner_endo_revision

description: Figure S1: Heatmap of duodenal microbiota profiles in wt and ko NTSR1 mice undergoing sham or VSG surgeries. 11 ASV presented significantly different relative abundances between groups (adjusted p&lt;0.05, Wald test). The color scale indicates taxa relative abundance.<br>
DOI: 10.6084/m9.figshare.14550960
title: Fig. S2.pdf_Ratner_endo_revision

description: Figure S3: Heatmap of fecal microbiota profiles in wt and ko NTSR1 mice undergoing sham or VSG surgeries. 82 ASV presented significantly different relative abundances between groups (adjusted p&lt;0.05, Wald test). The color scale indicates taxa relative abundance.
DOI: 10.6084/m9.figshare.14550960.v1
title: Fig. S2.pdf_Ratner_endo_revision

description: Figure S3: Heatmap of fecal microbiota profiles in wt and ko NTSR1 mice undergoing sham or VSG surgeries. 82 ASV presented significantly different relative abundances between groups (adjusted p&lt;0.05, Wald test). The color scale indicates taxa relative abundance.
DOI: 10.6084/m9.figshare.14550963
title: Fig. S2.pdf_Ratner_endo_revision

description: Figure S2: Heatmap of fecal microbiota profiles in wt and ko NTSR1 mice undergoing sham or VSG surgeries. 82 ASV presented significantly different relative abundances between groups (adjusted p&lt;0.05, Wald test). The color scale indicates taxa relative abundance.
DOI: 10.25345/c5hz4b
title: MassIVE MSV000087376 - WilliamScott_etal_ATRX_BioID_2021
title: This dataset consists of 50 raw MS files and associated peak lists and result files, acquired on a TripleTOF 6600 mass spectrometer operated in Data Dependent Acquisition mode. Samples were generated by William Scott, Erum Dhanji, and Jonathon Asa (some clones also generated by Boris Dyakov). Streptavidin affinity purification, mass spectrometric acquisition, and data analysis was performed by Boris Dyakov. The files are associated with a manuscript submitted for publication by Scott et al. that identifies proteins associated with ATRX using BioID. Eric Campos is the corresponding author of the manuscript (eric.campos@sickkids.ca). Anne-Claude Gingras should be contacted for questions about this dataset (gingras@lunenfeld.ca).
DOI: 10.6084/m9.figshare.14550963.v1
title: Fig. S2.pdf_Ratner_endo_revision

description: Figure S2: Heatmap of fecal microbiota profiles in wt and ko NTSR1 mice undergoing sham or VSG surgeries. 82 ASV presented significantly different relative abundances between groups (adjusted p&lt;0.05, Wald test). The color scale indicates taxa relative abundance.
DOI: 10.3886/e114770v1-85920
title: Replication data for: Why Do Skilled Immigrants Struggle in the Labor Market? A Field Experiment with Thirteen Thousand Resumes

description: Thousands of randomly manipulated resumes were sent in response to online job postings in Toronto to investigate why immigrants, allowed in based on skill, struggle in the labor market. The study finds substantial discrimination across a variety of occupations towards applicants with foreign experience or those with Indian, Pakistani, Chinese, and Greek names compared with English names. Listing language fluency, multinational firm experience, education from highly selective schools, or active extracurricular activities had no diminishing effect. Recruiters justify this behavior based on language skill concerns but fail to fully account for offsetting features when listed. (JEL J15, J24, J61)
DOI: 10.5281/zenodo.4740999
title: Vacinação contra Covid: tabulação de abandono vacinal (Coronavac) e erro vacinal entre doses dos vacinados no 1o mês da campanha (17/1 a 17/2)

description: Tabulação de dados do Datasus (microdados da Campanha Nacional de Vacinação contra Covid-19) sobre a trajetória vacinal até 8/4/21 dos imunizados contra Covid-19 no primeiro mês da campanha no Brasil (17/1/21 a 17/2/21) mostra que i) 562.431 pessoas que receberam a primeira dose da Coronavac não retornaram para receber a segunda dose do imunizante e que ii) 16.565 pessoas vacinadas no primeiro mês da campanha no Brasil (17/1/21 a 17/2/21) têm registro de primeira dose da vacina da Coronavac e a segunda dose da Oxford/AstraZeneca ou vice-versa. <strong>Total de vacinados (1a dose) entre 17/1 e 17/2:</strong><br> 1.573.072 Oxford/Astrazeneca<br> 3.978.749 Coronavac<br> Total: 5.551.821 <strong>Abandono vacinal (dos vacinados especificamente com Coronavac):</strong><br> 3.416.318 vacinados com Coronavac entre 17/1/21 a 17/2/21 voltaram para 2a dose até 8/4/21. Isso representa um abandono vacinal de 562.431 pessoas (14,13% dos imunizados). A 2a dose teria de ser ministrada até 28 dias após a primeira; em 8/4 já tinham se passado pelo menos 45 dias após o primeiro mês de vacinação no Brasil. <strong>Erro vacinal:</strong><br> Dos 5.551.821 vacinados entre 17/1/21 a 17/2/21 que voltaram para 2a dose até 8/4/21:<br> <br> 1a dose Coronavac -&gt; 1.735 vacinados tomaram a 2a dose de Oxford/Astrazeneca<br> 1a dose Oxford/Astrazeneca -&gt; 14.791 tomaram a 2a dose Coronavac*<br> Total: 16.565 vacinados com erro vacinal *retornaram antes dos 90 dias de intervalo entre doses estipulados para essa vacina, o que também é considerado erro vacinal Os dados deram base a duas reportagens publicadas na Folha de S.Paulo:<br> Mais de 500 mil pessoas que receberam a 1ª dose da vacina contra a Covid no Brasil não tomaram a 2ª (9/4/2021) e Mais de 16 mil pessoas tomaram doses trocadas de vacina contra Covid, mostra registro (22/4/2021)
DOI: 10.5281/zenodo.4740998
title: Vacinação contra Covid: tabulação de abandono vacinal (Coronavac) e erro vacinal entre doses dos vacinados no 1o mês da campanha (17/1 a 17/2)

description: Tabulação de dados do Datasus (microdados da Campanha Nacional de Vacinação contra Covid-19) sobre a trajetória vacinal até 8/4/21 dos imunizados contra Covid-19 no primeiro mês da campanha no Brasil (17/1/21 a 17/2/21) mostra que i) 562.431 pessoas que receberam a primeira dose da Coronavac não retornaram para receber a segunda dose do imunizante e que ii) 16.565 pessoas vacinadas no primeiro mês da campanha no Brasil (17/1/21 a 17/2/21) têm registro de primeira dose da vacina da Coronavac e a segunda dose da Oxford/AstraZeneca ou vice-versa. <strong>Total de vacinados (1a dose) entre 17/1 e 17/2:</strong><br> 1.573.072 Oxford/Astrazeneca<br> 3.978.749 Coronavac<br> Total: 5.551.821 <strong>Abandono vacinal (dos vacinados especificamente com Coronavac):</strong><br> 3.416.318 vacinados com Coronavac entre 17/1/21 a 17/2/21 voltaram para 2a dose até 8/4/21. Isso representa um abandono vacinal de 562.431 pessoas (14,13% dos imunizados). A 2a dose teria de ser ministrada até 28 dias após a primeira; em 8/4 já tinham se passado pelo menos 45 dias após o primeiro mês de vacinação no Brasil. <strong>Erro vacinal:</strong><br> Dos 5.551.821 vacinados entre 17/1/21 a 17/2/21 que voltaram para 2a dose até 8/4/21:<br> <br> 1a dose Coronavac -&gt; 1.735 vacinados tomaram a 2a dose de Oxford/Astrazeneca<br> 1a dose Oxford/Astrazeneca -&gt; 14.791 tomaram a 2a dose Coronavac*<br> Total: 16.565 vacinados com erro vacinal *retornaram antes dos 90 dias de intervalo entre doses estipulados para essa vacina, o que também é considerado erro vacinal Os dados deram base a duas reportagens publicadas na Folha de S.Paulo:<br> Mais de 500 mil pessoas que receberam a 1ª dose da vacina contra a Covid no Brasil não tomaram a 2ª (9/4/2021) e Mais de 16 mil pessoas tomaram doses trocadas de vacina contra Covid, mostra registro (22/4/2021)
DOI: 10.13140/rg.2.2.28504.62720
title: WhatsApp Evolution
DOI: 10.6084/m9.figshare.14462271
title: Metagenomic assemblies

description: Sample reads were co-assembled based on each sampling location using metaSPAdes v 3.11.1 with the following flags ‘-meta -t 16 --phred-offset 33 -m 500 -k 21,33,55,77,99,119’ and further filtered to a minimum scaffold length of 500 bp. Reads from samples and controls (i.e., extraction blank, filter blank, DI water blank) were mapped to co-assemblies using BWA-MEM. An approach similar to Dai et al.(Dai et al., 2020) was used to remove potential contaminant scaffolds.
DOI: 10.5281/zenodo.4729674
title: Factors contributing to prefixation of biaspectual verbs in Croatian Dataset

description: The dataset was colleted to examine the patterns behind prefixation of biaspectual verbs (BVs) in Croatian. In order to detect factors with a statistically significant impact on prefixation of BVs in Croatian, a random stratified sample of 237 Croatian BVs (37 BVs of Slavic origin and 200 biaspectual borrowings) was compiled. The data regarding the existence of perfective derivatives were extracted from three different corpora of contemporary Croatian and one subcorpus: the Croatian National Corpus (Tadić 1998, 2002), the Croatian Language Repository (Ćavar & Brozović-Rončević 2012; Brozović Rončević et al. 2018), and the Croatian Web Corpus and its subcorpus Forum (Ljubešić & Klubička 2014). For more information and detailed data description, see Kolaković (forthcoming).
description: {"references": ["Tadi\u0107, Marko. (1998). Raspon, opseg i sastav korpusa suvremenoga hrvatskoga jezika. Filologija, 30\u221231, 337\u2212347", "Tadi\u0107, Marko. (2002). Building the Croatian National Corpus. LREC2002 II, 441\u2212446. Paris/Las Palmas: ELRA", "\u0106avar, Damir; Brozovi\u0107-Ron\u010devi\u0107, Dunja. (2012). Riznica: The Croatian Language Corpus. Prace filologiczne 63, 51\u221265", "Brozovi\u0107 Ron\u010devi\u0107, Dunja et al. (2018). Croatian language corpus Riznica 0.1. Slovenian language resource repository CLARIN.SI. http://hdl.handle.net/11356/1180", "Ljube\u0161i\u0107, Nikola; Klubi\u010dka, Filip. (2014). {bs,hr,sr}WaC \u2014 Web corpora of Bosnian, Croatian and Serbian, in Bildhauer, F. and R. Sch\u00e4fer (eds.), Proceedings of the 9th Web as Corpus Workshop (WaC-9). Gothenburg, pp. 29\u221235", "Kolakovi\u0107, Zrinka. (forthcoming). Factors contributing to prefixation of biaspectual verbs in Croatian. Russian Linguistics"]}
DOI: 10.15468/sx8z34
title: New synonyms of Euconnus (Tetramelus) kraussi Reitter, 1880 (Coleoptera Staphylinidae, Scydmaeninae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hlaváč, Peter, Meybohm, Heinrich (2021): New synonyms of Euconnus (Tetramelus) kraussi Reitter, 1880 (Coleoptera Staphylinidae, Scydmaeninae). Zootaxa 4964 (2): 382-384, DOI: https://doi.org/10.11646/zootaxa.4964.2.8
DOI: 10.15468/rzxxgb
title: -- Review- - of- - the- - genus Diplazon- - Nees, -- 1819 -- (Hymenoptera: -- Ichneumonidae Diplazontinae) -- from- - Japan

description: This dataset contains the digitized treatments in Plazi based on the original journal article Morishita, Shunsuke, Watanabe, Kyohei (2021): -- Review- - of- - the- - genus Diplazon- - Nees, -- 1819 -- (Hymenoptera: -- Ichneumonidae Diplazontinae) -- from- - Japan. Zootaxa 4964 (1): 103-122, DOI: https://doi.org/10.11646/zootaxa.4964.1.5