cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3856143
title: Tetrapods: 2,560 baits targeting 2,386 conserved loci (Tetrapods-UCE-2.5Kv1.fasta.zip)

description: A target enrichment probe set designed from 2,386 UCE loci identified among Tetrapods. This is a ZIP archive of a FASTA file that is ready for submission of the probe set for synthesis.
DOI: 10.7910/dvn/v1rjpf/8gb2ef
title: mea20150830_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3856143.v1
title: Tetrapods: 2,560 baits targeting 2,386 conserved loci (Tetrapods-UCE-2.5Kv1.fasta.zip)

description: A target enrichment probe set designed from 2,386 UCE loci identified among Tetrapods. This is a ZIP archive of a FASTA file that is ready for submission of the probe set for synthesis.
DOI: 10.7910/dvn/v1rjpf/0uyefm
title: mea20160509_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3856098
title: Task vs. Rest: Brain network matrices from task coactivation and resting-state correlations

description: This dataset includes a coactivation matrix of 140 regions of interest calculated from Neurosynth database and a correlation matrix of resting-state functional connectivity. For more information, please navigate to our paper:<br>Di X, Gohel S, Kim EH and Biswal BB (2013) Task vs. rest—different network configurations between the coactivation and the resting-state brain networks. Front. Hum. Neurosci. 7:493. doi: 10.3389/fnhum.2013.00493
DOI: 10.7910/dvn/v1rjpf/x3bom1
title: mea20160409_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3856098.v2
title: Task vs. Rest: Brain network matrices from task coactivation and resting-state correlations

description: This dataset includes a coactivation matrix of 140 regions of interest calculated from Neurosynth database and a correlation matrix of resting-state functional connectivity. For more information, please navigate to our paper:<br>Di X, Gohel S, Kim EH and Biswal BB (2013) Task vs. rest—different network configurations between the coactivation and the resting-state brain networks. Front. Hum. Neurosci. 7:493. doi: 10.3389/fnhum.2013.00493
DOI: 10.6084/m9.figshare.3856074
title: A Platform of Police Reports - ICWI 2016

description: Software and data of the article published at ICWI'2016 titled<br>"A Platform to Enrich, Expand and Publish Linked Data of Police Reports".<br>
DOI: 10.6084/m9.figshare.3856098.v1
title: New draft item

description: This dataset includes a coactivation matrix of 140 regions of interest calculated from Neurosynth database and a correlation matrix of resting-state functional connectivity. For more information, please navigate to our paper:<br>Di X, Gohel S, Kim EH and Biswal BB (2013) Task vs. rest—different network configurations between the coactivation and the resting-state brain networks. Front. Hum. Neurosci. 7:493. doi: 10.3389/fnhum.2013.00493
DOI: 10.7910/dvn/v1rjpf/vbwyum
title: mea20151025_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3853491
title: The influence of food abundance, food dispersion and habitat structure on territory selection and size of an Afrotropical terrestrial insectivore

description: Most tropical insectivorous birds, unlike their temperate counterparts, hold and defend a feeding and breeding territory year-around. However, our understanding of ecological factors influencing territory selection and size in tropical insectivores is limited. Here we examine three prominent hypotheses relating food abundance, food dispersion (spatial arrangement of food items), and habitat structure to territoriality in the Usambara Thrush <i>Turdus roehli</i>. We first compared leaf-litter macro-invertebrate abundance and dispersion, and habitat structure between territories and random sites. We then examined the relation between these same ecological factors and territory size. Invertebrate abundance and dispersion were sparsely and evenly distributed across our study system and did not vary between territories and random sites. In contrast, habitat structure did vary between territories and random sites indicating the Usambara Thrush selects territories with open understorey and closed overstorey habitat. Invertebrate abundance and dispersion within territories of the Usambara Thrush were not associated with habitat structure. We believe the most likely explanation for the Usambara Thrush’s preference for open understorey and closed overstorey habitat relates to foraging behavior. Using information-theoretic model selection we found that invertebrate abundance was the highest-ranked predictor of territory size and was inversely related, consistent with food value theory of territoriality.
DOI: 10.7910/dvn/v1rjpf/cluntb
title: mea20150201_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3853491.v2
title: The influence of food abundance, food dispersion and habitat structure on territory selection and size of an Afrotropical terrestrial insectivore

description: Most tropical insectivorous birds, unlike their temperate counterparts, hold and defend a feeding and breeding territory year-around. However, our understanding of ecological factors influencing territory selection and size in tropical insectivores is limited. Here we examine three prominent hypotheses relating food abundance, food dispersion (spatial arrangement of food items), and habitat structure to territoriality in the Usambara Thrush <i>Turdus roehli</i>. We first compared leaf-litter macro-invertebrate abundance and dispersion, and habitat structure between territories and random sites. We then examined the relation between these same ecological factors and territory size. Invertebrate abundance and dispersion were sparsely and evenly distributed across our study system and did not vary between territories and random sites. In contrast, habitat structure did vary between territories and random sites indicating the Usambara Thrush selects territories with open understorey and closed overstorey habitat. Invertebrate abundance and dispersion within territories of the Usambara Thrush were not associated with habitat structure. We believe the most likely explanation for the Usambara Thrush’s preference for open understorey and closed overstorey habitat relates to foraging behavior. Using information-theoretic model selection we found that invertebrate abundance was the highest-ranked predictor of territory size and was inversely related, consistent with food value theory of territoriality.
DOI: 10.7910/dvn/v1rjpf/ft9zzh
title: mea20150419_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3852138
title: Gospel of Luke: Characters ordered by social network community

description: The characters in the Gospel of Luke, listed in order of social network community. Communities were determined using the modularity score algorithm in Gephi 0.8.2 [1], passed the following parameters:<br>Randomize: OnUse edge weights: OnResolution: 0.5<br>[1] Bastian M., S. Heymann, M. Jacomy. 2009. "Gephi: An Open Source Software for Exploring and Manipulating Networks." International AAAI Conference on Weblogs and Social Media. https://gephi.org
DOI: 10.7910/dvn/v1rjpf/p7p1g3
title: mea20161124_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3852138.v2
title: Gospel of Luke: Characters ordered by social network community

description: The characters in the Gospel of Luke, listed in order of social network community. Communities were determined using the modularity score algorithm in Gephi 0.8.2 [1], passed the following parameters:<br>Randomize: OnUse edge weights: OnResolution: 0.5<br>[1] Bastian M., S. Heymann, M. Jacomy. 2009. "Gephi: An Open Source Software for Exploring and Manipulating Networks." International AAAI Conference on Weblogs and Social Media. https://gephi.org
DOI: 10.7910/dvn/v1rjpf/iwfukp
title: mea20161220_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3852138.v1
title: Gospel of Luke: Characters ordered by social network community

description: The characters in the Gospel of Luke, listed in order of social network community. Communities were determined using the modularity score algorithm in Gephi 0.8.2 [1], passed the following parameters:<br>Randomize: OnUse edge weights: OnResolution: 0.5<br>[1] Bastian M., S. Heymann, M. Jacomy. 2009. "Gephi: An Open Source Software for Exploring and Manipulating Networks." International AAAI Conference on Weblogs and Social Media.
DOI: 10.7910/dvn/v1rjpf/lixtqb
title: mea20160102_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3856074.v3
title: A Platform of Police Reports - ICWI 2016

description: Software and data of the article published at ICWI'2016 titled<br>"A Platform to Enrich, Expand and Publish Linked Data of Police Reports".<br>
DOI: 10.7910/dvn/v1rjpf/y5t1z3
title: mea20160513_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3856074.v4
title: A Platform of Police Reports - ICWI 2016

description: Software and data of the article published at ICWI'2016 titled<br>"A Platform to Enrich, Expand and Publish Linked Data of Police Reports".<br>
DOI: 10.7910/dvn/v1rjpf/letafv
title: mea20150725_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/68bmxr
title: mea20161129_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/vquij2
title: mea20160824_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/lqabst
title: mea20160212_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/kfhhot
title: mea20160118_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/hra4rk
title: mea20160720_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851802
title: Two missense mutations in <i>SALL4</i> in a patient with microphthalmia, coloboma, and optic nerve hypoplasia

description: To investigate the genetic etiology of anophthalmia and microphthalmia, we used exome sequencing in a Caucasian female with unilateral microphthalmia and coloboma, bilateral optic nerve hypoplasia, ventricular and atrial septal defects, and growth delays. We found two sequence variants in <i>SALL4</i> - c.[575C&gt;A], predicting p.(Ala192Glu), that was paternally inherited, and c.[2053G&gt;C], predicting p.(Asp685His), that was maternally inherited. Haploinsufficiency for <i>SALL4</i> due to nonsense or frameshift mutations has been associated with acro-renal ocular syndrome that is characterized by eye defects including Duane anomaly and coloboma, in addition to radial ray malformations and renal abnormalities. Our report is the first description of structural eye defects associated with two missense variants in <i>SALL4</i> inherited in trans; the absence of reported findings in both parents suggests that both sequence variants are hypomorphic mutations and that both are needed for the ocular phenotype. <i>SALL4</i> is expressed in the developing lens and regulates <i>BMP4</i>, leading us to speculate that altered <i>BMP4</i> expression was responsible for the eye defects, but we could not demonstrate altered <i>BMP4</i> expression <i>in vitro</i> after using small interfering RNAs (siRNAs) to reduce <i>SALL4</i> expression. We conclude that <i>SALL4</i> hypomorphic variants may influence eye development.
DOI: 10.6084/m9.figshare.3851802.v1
title: Two missense mutations in <i>SALL4</i> in a patient with microphthalmia, coloboma, and optic nerve hypoplasia

description: To investigate the genetic etiology of anophthalmia and microphthalmia, we used exome sequencing in a Caucasian female with unilateral microphthalmia and coloboma, bilateral optic nerve hypoplasia, ventricular and atrial septal defects, and growth delays. We found two sequence variants in <i>SALL4</i> - c.[575C&gt;A], predicting p.(Ala192Glu), that was paternally inherited, and c.[2053G&gt;C], predicting p.(Asp685His), that was maternally inherited. Haploinsufficiency for <i>SALL4</i> due to nonsense or frameshift mutations has been associated with acro-renal ocular syndrome that is characterized by eye defects including Duane anomaly and coloboma, in addition to radial ray malformations and renal abnormalities. Our report is the first description of structural eye defects associated with two missense variants in <i>SALL4</i> inherited in trans; the absence of reported findings in both parents suggests that both sequence variants are hypomorphic mutations and that both are needed for the ocular phenotype. <i>SALL4</i> is expressed in the developing lens and regulates <i>BMP4</i>, leading us to speculate that altered <i>BMP4</i> expression was responsible for the eye defects, but we could not demonstrate altered <i>BMP4</i> expression <i>in vitro</i> after using small interfering RNAs (siRNAs) to reduce <i>SALL4</i> expression. We conclude that <i>SALL4</i> hypomorphic variants may influence eye development.
DOI: 10.7910/dvn/v1rjpf/7ph92x
title: mea20160126_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/agcrgz
title: mea20160214_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851784
title: Accounting Network

description: Datasets for "The Accounting Network: how financial institutions react to systemic crisis"<br>
DOI: 10.7910/dvn/v1rjpf/aqxon9
title: mea20150713_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/cls62y
title: mea20161128_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851721
title: Computational meshes of left atrial anatomy to predict fibrillation recurrence after ablation

description: Collection of the anatomy of 144 subjects selected for radio-frequency ablation to terminate atrial fibrillation, together with their clinical follow-up data about recurrence after the procedure.<br>Each anatomy is described by their 3D shape and by morphological indexes.<br>For further details, please go to this publication: "Novel computational analysis of left atrial anatomy improves prediction of atrial fibrillation recurrence after ablation" Front. Physiol. doi: 10.3389/fphys.2017.00068<br>And do not hesitate to contact us if you need any help!
DOI: 10.7910/dvn/v1rjpf/qxqtnl
title: mea20151031_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/42ey1l
title: mea20160604_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851721.v1
title: Computational meshes of left atrial anatomy to predict fibrillation recurrence after ablation

description: Collection of the anatomy of 144 subjects selected for radio-frequency ablation to terminate atrial fibrillation, together with their clinical follow-up data about recurrence after the procedure.<br>Each anatomy is described by their 3D shape and by morphological indexes.<br><br>
DOI: 10.7910/dvn/v1rjpf/7mlpoy
title: mea20160205_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851721.v2
title: Computational meshes of left atrial anatomy to predict fibrillation recurrence after ablation

description: Collection of the anatomy of 144 subjects selected for radio-frequency ablation to terminate atrial fibrillation, together with their clinical follow-up data about recurrence after the procedure.<br>Each anatomy is described by their 3D shape and by morphological indexes.<br><br>
DOI: 10.7910/dvn/v1rjpf/tjhjyc
title: mea20150420_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851544
title: Panorama de l'évaluation scientifique et de ses évolutions

description: Résumé de l'interview de David Pontille sur l'évaluation scientifique.<br>Vidéos disponibles ici : <br>Panorama de l'évaluation scientifique et de ses évolutions : du facteur d'impact au h-index S6<br>Panorama de l'évaluation scientifique et de ses évolutions : le développement des altmetrics S6<br>
DOI: 10.6084/m9.figshare.3851721.v3
title: Computational meshes of left atrial anatomy to predict fibrillation recurrence after ablation

description: Collection of the anatomy of 144 subjects selected for radio-frequency ablation to terminate atrial fibrillation, together with their clinical follow-up data about recurrence after the procedure.<br>Each anatomy is described by their 3D shape and by morphological indexes.<br><br>
DOI: 10.7910/dvn/v1rjpf/r8rydk
title: mea20151118_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851544.v2
title: Panorama de l'évaluation scientifique et de ses évolutions

description: Résumé de l'interview de David Pontille sur l'évaluation scientifique.<br>Vidéos disponibles ici : <br>Panorama de l'évaluation scientifique et de ses évolutions : du facteur d'impact au h-index S6<br>Panorama de l'évaluation scientifique et de ses évolutions : le développement des altmetrics S6<br>
DOI: 10.7910/dvn/v1rjpf/ocjju9
title: mea20150415_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851544.v1
title: Panorama de l'évaluation scientifique et de ses évolutions

description: Résumé de l'interview de David Pontille sur l'évaluation scientifique.<br>Vidéos disponibles ici : <br>Panorama de l'évaluation scientifique et de ses évolutions : du facteur d'impact au h-index S6<br>Panorama de l'évaluation scientifique et de ses évolutions : le développement des altmetrics S6<br>
DOI: 10.6084/m9.figshare.3851721.v4
title: Computational meshes of left atrial anatomy to predict fibrillation recurrence after ablation

description: Collection of the anatomy of 144 subjects selected for radio-frequency ablation to terminate atrial fibrillation, together with their clinical follow-up data about recurrence after the procedure.<br>Each anatomy is described by their 3D shape and by morphological indexes.<br><br>
DOI: 10.7910/dvn/v1rjpf/yjgi2w
title: mea20161027_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851721.v5
title: Computational meshes of left atrial anatomy to predict fibrillation recurrence after ablation

description: Collection of the anatomy of 144 subjects selected for radio-frequency ablation to terminate atrial fibrillation, together with their clinical follow-up data about recurrence after the procedure.<br>Each anatomy is described by their 3D shape and by morphological indexes.<br><br>
DOI: 10.7910/dvn/v1rjpf/lsigpe
title: mea20160906_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851481
title: Primary and Supplementary Figures

description: Figures published in the study by Vineis et al, 2016.
DOI: 10.7910/dvn/v1rjpf/ho69fn
title: mea20161117_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851721.v6
title: Computational meshes of left atrial anatomy to predict fibrillation recurrence after ablation

description: Collection of the anatomy of 144 subjects selected for radio-frequency ablation to terminate atrial fibrillation, together with their clinical follow-up data about recurrence after the procedure.<br>Each anatomy is described by their 3D shape and by morphological indexes.<br>For further details, please go to this publication: "Novel computational analysis of left atrial anatomy improves prediction of atrial fibrillation recurrence after ablation" Front. Physiol. doi: 10.3389/fphys.2017.00068<br>And do not hesitate to contact us if you need any help!
DOI: 10.7910/dvn/v1rjpf/ywzckc
title: mea20160223_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851478
title: Supplementary Tables

description: Supplementary Data for the Vineis et al, 2016 study.
DOI: 10.6084/m9.figshare.3851481.v1
title: Primary and Supplementary Figures

description: Figures published in the study by Vineis et al, 2016.
DOI: 10.6084/m9.figshare.3851466
title: Bird Audio Detection Challenge 2016: public data

description: Data labels for the Bird Audio Challenge 2016. These annotations indicate the presence/absence of bird sounds in various datasets of 10-second audio clips.<br><br>More info:<br>http://machine-listening.eecs.qmul.ac.uk/bird-audio-detection-challenge/<br><br>===============<br><br>REUSE:<br><br>The data is published under a Creative Commons CC-BY licence, and so you may reuse it as long as you attribute the origin. In academic work, please do this via a citation to our paper on the challenge:<br><br>Dan Stowell, Mike Wood, Yannis Stylianou, Hervé Glotin. Bird detection in audio: a survey and a challenge, in <i>Proceedings of MLSP 2016</i>, arXiv:1608.03417 [cs.SD], 2016.<br><br>You may also wish to link directly to this dataset, which you can do via its DOI https://dx.doi.org/10.6084/m9.figshare.3851466<br><br>===============<br><br>How the annotations were collected:<br><br>The label "hasbird" represents whether a sound clip contains any audible bird sound. Note that there may be other sounds such as weather or humans, occasionally loud - the label does not mean that bird sound predominates.<br><br>The labels were double-annotated, by the following procedures:<br><br>* For the ff1010bird data, the presence/absence of birds was first deduced from the tags provided by the original FreeSound recordist (diverse crowdsourced tags such as "birdsong" "dawn-chorus" or "phylloscopus-collybita"), and then double-checked and refined by a manual annotator.<br><br>* For the warblrb10k data, the annotations were crowdsourced via a web service, answering the following question: "Can you hear any birds in this clip?" Annotations were then double-checked by a manual annotator to correct false-positives and -negatives.<br><br><br>To download the corresponding audio data please see http://machine-listening.eecs.qmul.ac.uk/bird-audio-detection-challenge/<br>
DOI: 10.7910/dvn/v1rjpf/9ukwt6
title: mea20150327_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851478.v1
title: Supplementary Tables

description: Supplementary Data for the Vineis et al, 2016 study.
DOI: 10.6084/m9.figshare.3851460
title: Coupling a settlement growth model with an agro-economic land allocation model for securing ecosystem services provision

description: Mountain landscapes are undergoing rapid land-use changes. Settlement expansion, the intensification of agricultural land-use practices, and farmland abandonment result in a decline of natural and semi-natural habitats and the related ecosystem services (ES). In this context, spatial planning has emerged as a key instrument for the management of ES provision. To better understand trade-offs and interactions between settlement growth and ES provision in a spatially explicit manner, we present a new modeling framework coupling an agent-based, agro-economic optimization model and a cellular-automata-based settlement growth model. The framework is applied in an inner alpine valley in the Valais, Switzerland, which experienced rapid settlement growth in recent years. Results demonstrate how the model framework allows support of local planning processes. Particularly cooperation among municipalities and an explicit consideration of ES can inform spatially explicit ES trade-off decisions under increasing demand for land. We conclude that better informed spatial planning processes support ES provision.
DOI: 10.7910/dvn/v1rjpf/gfckm0
title: mea20161114_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3851460.v1
title: Coupling a settlement growth model with an agro-economic land allocation model for securing ecosystem services provision

description: Mountain landscapes are undergoing rapid land-use changes. Settlement expansion, the intensification of agricultural land-use practices, and farmland abandonment result in a decline of natural and semi-natural habitats and the related ecosystem services (ES). In this context, spatial planning has emerged as a key instrument for the management of ES provision. To better understand trade-offs and interactions between settlement growth and ES provision in a spatially explicit manner, we present a new modeling framework coupling an agent-based, agro-economic optimization model and a cellular-automata-based settlement growth model. The framework is applied in an inner alpine valley in the Valais, Switzerland, which experienced rapid settlement growth in recent years. Results demonstrate how the model framework allows support of local planning processes. Particularly cooperation among municipalities and an explicit consideration of ES can inform spatially explicit ES trade-off decisions under increasing demand for land. We conclude that better informed spatial planning processes support ES provision.
DOI: 10.7910/dvn/v1rjpf/3oqkot
title: mea20160519_03.txt.gz

description: :unav