cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4047221
title: SensiLab/Andy-Lomas-Generative-Art-Dataset: Initial release

description: This is the initial release of the Andy Lomas Generative Art dataset. It contains a collection of 1,774 images of 3D generative art forms created by computational artist Andy Lomas. This dataset includes images, their generative parameters, artist-defined aesthetic rankings and categorisations of each visual form.
DOI: 10.18112/openneuro.ds003165.v1.0.0
title: Tasting Pictures: Viewing Images of Foods Evokes Taste-Quality-Specific Activity in Gustatory Insular Cortex
DOI: 10.17608/k6.auckland.12886745.v1
title: Chromatin interactions identify spatial regulatory loci that modulate genes with pleiotropic effects on type 1 and type 2 diabetes

description: All datasets and supplementary information for this article.
DOI: 10.17632/wkcr4wb4c4.2
title: Data for: From subduction initiation to arc–polarity reversal: Evidence from the petrology, geochemistry and geochronology of Neoarchean ophiolitic mélange in the Zunhua Structural Belt, North China Craton

description: Table 1. LA–ICP–MS U–Pb data for biotite–plagioclase–quartz gneiss, metadiabase and mafic dike in the Zunhua structural belt of the Eastern Hebei Complex, North China Craton. Table 2. Geochemical composition of the ultramafic–mafic rocks in the Zunhua structural belt of the Eastern Hebei Complex, North China Craton. Table 3. Sm–Nd composition of the pyroxenite in the Zunhua structural belt of the Eastern Hebei Complex, North China Craton. Table 4. Metamorphic P–T conditions during late Neoarchean in the Eastern Hebei Province, North China Craton. Supplementary Table 1. Mineral composition of olivine, chromite, orthopyroxene in the ultramafic rocks from the Zunhua structural belt of the Eastern Hebei Complex, North China Craton.
DOI: 10.6084/m9.figshare.12994241.v1
title: MetS Human Circulating EV miRNAs and mRNAs

description: EVs were collected from plasma of patients with MetS or age-matched Lean controls (n=4 each). RNA-sequencing was performed to identify dysregulated miRNAs and mRNAs.
DOI: 10.5517/ccdc.csd.cc25qwsl
title: CCDC 2018000: Experimental Crystal Structure Determination

description: Related Article: R. Anil Kumar, K.M. Mahadevan, H.S. Bhojyanaik, M.V. Deepa Urs, N.K. Lokanath, S. Naveen|2018|J.Applic.Chem.|7|353|
DOI: 10.5517/ccdc.csd.cc25qx2x
title: CCDC 2018009: Experimental Crystal Structure Determination

description: Related Article: T.P. Jyothi, M.K. Shivanand, S.B. Benaka Prasad, M.K. Ravindra, K. M. Mahadevan, N.K. Lokanath, S. Naveen|2018|J.Applic.Chem.|7|382|
DOI: 10.5517/ccdc.csd.cc24pwj8
title: CCDC 1987240: Experimental Crystal Structure Determination

description: Related Article: Diana Ainembabazi, Kai Wang, Matthew Finn, James Ridenour, Adelina Voutchkova-Kostal|2020|Green Chemistry|22|6093|doi:10.1039/D0GC01958E
DOI: 10.5517/ccdc.csd.cc25s0hh
title: CCDC 2019076: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc25s0jj
title: CCDC 2019077: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc25s0kk
title: CCDC 2019078: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc25s0ll
title: CCDC 2019079: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc25s0mm
title: CCDC 2019080: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc25s0nn
title: CCDC 2019081: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc25s0pp
title: CCDC 2019082: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc25s0qq
title: CCDC 2019083: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc25s0rr
title: CCDC 2019084: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc25s0ss
title: CCDC 2019085: Experimental Crystal Structure Determination

description: Related Article: Chao Bai, Jun-Lin Zhang, Huai-Ming Hu, Fei Wang, Bo-Zhou Wang, Lei Yan, Shi He, Xiaofang Wang|2020|J.Solid State Chem.|292|121691|doi:10.1016/j.jssc.2020.121691
DOI: 10.5517/ccdc.csd.cc22ft6k
title: CCDC 1919898: Experimental Crystal Structure Determination

description: Related Article: Jiayue Tian, Luyao Liu, Kang Zhou, Zixiao Hong, Qihui Chen, Feilong Jiang, Daqiang Yuan, Qingfu Sun, Maochun Hong|2020|Chemical Science|11|9818|doi:10.1039/D0SC01176B
DOI: 10.5517/ccdc.csd.cc22ft7l
title: CCDC 1919899: Experimental Crystal Structure Determination

description: Related Article: Jiayue Tian, Luyao Liu, Kang Zhou, Zixiao Hong, Qihui Chen, Feilong Jiang, Daqiang Yuan, Qingfu Sun, Maochun Hong|2020|Chemical Science|11|9818|doi:10.1039/D0SC01176B
DOI: 10.5517/ccdc.csd.cc22ftbp
title: CCDC 1919902: Experimental Crystal Structure Determination

description: Related Article: Jiayue Tian, Luyao Liu, Kang Zhou, Zixiao Hong, Qihui Chen, Feilong Jiang, Daqiang Yuan, Qingfu Sun, Maochun Hong|2020|Chemical Science|11|9818|doi:10.1039/D0SC01176B
DOI: 10.5517/ccdc.csd.cc22ft9n
title: CCDC 1919901: Experimental Crystal Structure Determination

description: Related Article: Jiayue Tian, Luyao Liu, Kang Zhou, Zixiao Hong, Qihui Chen, Feilong Jiang, Daqiang Yuan, Qingfu Sun, Maochun Hong|2020|Chemical Science|11|9818|doi:10.1039/D0SC01176B
DOI: 10.5517/ccdc.csd.cc22ftcq
title: CCDC 1919903: Experimental Crystal Structure Determination

description: Related Article: Jiayue Tian, Luyao Liu, Kang Zhou, Zixiao Hong, Qihui Chen, Feilong Jiang, Daqiang Yuan, Qingfu Sun, Maochun Hong|2020|Chemical Science|11|9818|doi:10.1039/D0SC01176B
DOI: 10.5517/ccdc.csd.cc22ftgt
title: CCDC 1919906: Experimental Crystal Structure Determination

description: Related Article: Jiayue Tian, Luyao Liu, Kang Zhou, Zixiao Hong, Qihui Chen, Feilong Jiang, Daqiang Yuan, Qingfu Sun, Maochun Hong|2020|Chemical Science|11|9818|doi:10.1039/D0SC01176B
DOI: 10.5517/ccdc.csd.cc25vsg9
title: CCDC 2021741: Experimental Crystal Structure Determination

description: Related Article: Na Wang, Yimin Jia, Hongmei Qin, Zhong-xing Jiang, Zhigang Yang|2020|Org.Lett.|22|7378|doi:10.1021/acs.orglett.0c02747
DOI: 10.5517/ccdc.csd.cc25vxsr
title: CCDC 2021875: Experimental Crystal Structure Determination

description: Related Article: Jing Zhang, Shuaiwei Qi, Chenyang Zhang, Zengming Fan, Qinwen Ding, Shizhong Mao, Zeyuan Dong|2020|Org.Lett.|22|7305|doi:10.1021/acs.orglett.0c02644
DOI: 10.5517/ccdc.csd.cc25wg5q
title: CCDC 2022383: Experimental Crystal Structure Determination

description: Related Article: Ibtissam Rayni, Youness El Bakri, Amal Haoudi, mYoussef Kandri Rodi, El Mokhtar Essassi, Joel T. Mague|2017|Journal Marocain de Chimie Heterocyclique|16|207|
DOI: 10.5517/ccdc.csd.cc25xs0x
title: CCDC 2023649: Experimental Crystal Structure Determination

description: Related Article: Darya Yu. Leshok, Ruslan F. Mulagaleev, Aleksander K. Starkov, Aleksander N. Matsulev, Sergey D. Kirik|2014|SFU Journal Chem.|7|383|
DOI: 10.6084/m9.figshare.12997013
title: GO pathways

description: This is a list of GO pathways associated with social communication questionnaire scores in a dataset of autism.
DOI: 10.6084/m9.figshare.12997013.v1
title: GO pathways

description: This is a list of GO pathways associated with social communication questionnaire scores in a dataset of autism.
DOI: 10.6084/m9.figshare.12996986
title: Nguyen.xlsx

description: This data is used for a research paper
DOI: 10.6084/m9.figshare.12996986.v1
title: Nguyen.xlsx

description: This data is used for a research paper
DOI: 10.25442/hku.12776147
title: Messy mangroves: Anthropogenic marine debris in mangroves globally, with an investigation on Hong Kong mangrove debris and its effect on the faunal community

description: One file contains data from my macrodebris survey across various mangrove sites across Hong Kong. See my thesis Chapter 3 for more information. The other file contains data used in Chapter 4, to assess change in crab and mollusc community in those areas.
DOI: 10.25442/hku.12776147.v1
title: Messy mangroves: Anthropogenic marine debris in mangroves globally, with an investigation on Hong Kong mangrove debris and its effect on the faunal community

description: One file contains data from my macrodebris survey across various mangrove sites across Hong Kong. See my thesis Chapter 3 for more information. The other file contains data used in Chapter 4, to assess change in crab and mollusc community in those areas.
DOI: 10.21227/ry8k-f078
title: Model 06

description: Model 06.
DOI: 10.25345/c5kv1s
title: MassIVE MSV000086196 - Novel urinary protein biomarkers for urothelial cancer in patients with chronic kidney disease
title: To identify urinary protein markers of urothelial carcinoma (UC), we used the iTRAQ labeling-quantitative proteomics approach and analyzed urine proteomes of UC, chronic kidney disease (CKD), and healthy subjects.
DOI: 10.25345/c5qj42
title: MassIVE MSV000086195 - Skeletal Muscle Proteomics of High Functioning Octogenarians
title: Skeletal muscle mass and function decline more precipitously after the age 75 y. To provide insights into biologically relevant mechanisms for preserving muscle mass and physical function in advanced age, a battery of physical function tests, muscle cross-sectional area by MRI and a vastus lateralis muscle biopsy were performed in 15 octogenarian world class track and field masters athletes (MA) and 14 non-athlete age- and sex-matched controls (NA). Muscle samples were analyzed using liquid-chromatography mass spectrometry to generate proteomics data, by histochemistry to identify respiratory compromised muscle fibers, and by quantitative real-time polymerase chain reaction to estimate mtDNA copy number. Physical function and muscle cross-sectional area were higher in MA than NA. Of nearly 6,000 proteins identified and quantified in muscle biopsy specimens, ~800 were differentially represented in MA versus NA. Most of the differentially represented proteins related to mitochondrial structure and function and were overrepresented in muscle of MA versus controls, including TCA cycle, respiratory electron transport capacity (ETC), cristae formation, sirtuins, and 8 mtDNA-encoded proteins. On the contrary, proteins from the spliceosome complex and nuclear pore were downregulated in MA. Consistent with proteomics, MA had fewer respiratory compromised fibers, higher mtDNA copy number, and an increased protein ratio of the cristae-bound ETC subunits relative to the outer mitochondrial membrane protein voltage dependent anion channel. In conclusion, high physical function in advanced age is associated with preservation of mitochondrial health and function, with underrepresentation of proteins that process pre-RNA and determine splicing variants, and underrepresentation of nuclear pore proteins.
DOI: 10.6084/m9.figshare.12996914
title: R0230_20181020a_videos

description: Rat 0230, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.5517/ccdc.csd.cc25xs1y
title: CCDC 2023650: Experimental Crystal Structure Determination

description: Related Article: Darya Yu. Leshok, Ruslan F. Mulagaleev, Aleksander K. Starkov, Aleksander N. Matsulev, Sergey D. Kirik|2014|SFU Journal Chem.|7|383|
DOI: 10.5517/ccdc.csd.cc25zj0q
title: CCDC 2025323: Experimental Crystal Structure Determination

description: Related Article: E.B. Cinar, M.S.H. Faizi, N.K. Yagci, O.E. Dogan, A.S. Aydin, E. Agar, N. Dege, A. Mashrai|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1551|doi:10.1107/S2056989020011652
DOI: 10.5517/ccdc.csd.cc25zknd
title: CCDC 2025374: Experimental Crystal Structure Determination

description: Related Article: H.L. Deubner, M. Koester, C. von Haenisch, F. Kraus|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1587|doi:10.1107/S205698902001169X
DOI: 10.5517/ccdc.csd.cc25zz16
title: CCDC 2025758: Experimental Crystal Structure Determination

description: Related Article: A.P. Novikov, S.N. Ryagin, M.S. Grigoriev, A.V. Safonov, K.E. German|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1557|doi:10.1107/S2056989020011809
DOI: 10.5517/ccdc.csd.cc2600y6
title: CCDC 2025817: Experimental Crystal Structure Determination

description: Related Article: J.S. McCarthy, C.D. McMillen, J.A. Pienkos, P.S. Wagenknecht|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1562|doi:10.1107/S2056989020011834
DOI: 10.5517/ccdc.csd.cc2605yc
title: CCDC 2025972: Experimental Crystal Structure Determination

description: Related Article: A.J. Cigler, J.A. Kaduk|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1566|doi:10.1107/S2056989020011846
DOI: 10.5517/ccdc.csd.cc26011b
title: CCDC 2025820: Experimental Crystal Structure Determination

description: Related Article: C.L. Hall, V. Hamilton, J. Potticary, M.E. Cremeens, N.E. Pridmore, H.A. Sparkes, G.D. D'ambruoso, S.D. Warren, M. Matsumoto, S.R. Hall|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1599|doi:10.1107/S2056989020011858
DOI: 10.5517/ccdc.csd.cc26012c
title: CCDC 2025821: Experimental Crystal Structure Determination

description: Related Article: C.L. Hall, V. Hamilton, J. Potticary, M.E. Cremeens, N.E. Pridmore, H.A. Sparkes, G.D. D'ambruoso, S.D. Warren, M. Matsumoto, S.R. Hall|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1599|doi:10.1107/S2056989020011858
DOI: 10.5517/ccdc.csd.cc2606v9
title: CCDC 2026000: Experimental Crystal Structure Determination

description: Related Article: U.R. Pokharel, A.P. Naquin, C.P. Brochon, F.R. Fronczek|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1582|doi:10.1107/S2056989020011901
DOI: 10.5517/ccdc.csd.cc260p64
title: CCDC 2026445: Experimental Crystal Structure Determination

description: Related Article: S. Kansiz, T. Agar, N. Dege, O.E. Dogan, R. Ahmed, E. Saif|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1595|doi:10.1107/S2056989020011974
DOI: 10.5517/ccdc.csd.cc238rbh
title: CCDC 1944826: Experimental Crystal Structure Determination

description: Related Article: K.M. Rutledge, C. Griesbach, B.Q. Mercado, M.W. Peczuh|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1617|doi:10.1107/S2056989020012037
DOI: 10.5517/ccdc.csd.cc238rcj
title: CCDC 1944827: Experimental Crystal Structure Determination

description: Related Article: K.M. Rutledge, C. Griesbach, B.Q. Mercado, M.W. Peczuh|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1617|doi:10.1107/S2056989020012037
DOI: 10.5517/ccdc.csd.cc238rdk
title: CCDC 1944828: Experimental Crystal Structure Determination

description: Related Article: K.M. Rutledge, C. Griesbach, B.Q. Mercado, M.W. Peczuh|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1617|doi:10.1107/S2056989020012037
DOI: 10.6084/m9.figshare.12997126
title: Additional file 4 of B chromosomes of multiple species have intense evolutionary dynamics and accumulated genes related to important biological processes

description: Additional file 4: Supplementary Datasets (Excel files may include multiple sheets for respective species). Dataset 1. A complete list of B blocks detected in A. mexicanus, A. correntinus and A. flavolineata. Dataset 2. Genes integrity percentage of the B blocks of A. mexicanus and A. correntinus. Dataset 3. A complete list of B-linked CDS with significant Log base 2 ratio in A. mexicanus, A correntinus and A. flavolineata. Dataset 4. List of B exclusive sequences detected in A. mexicanus, A. correntinus and A. flavolineata. Dataset 5. qPCR GDR ratio experiment CT values of representative B blocks in 0B, 1B and 2B of A. mexicanus. Dataset 6. Methylated B blocks and CpG Islands detected in A. mexicanus. Dataset 7. A complete list of enriched GO terms in all studied species. Dataset 8. Fasta sequences of the B blocks (A. mexicanus). Dataset 9. Fasta sequences of the B blocks (A. correntinus). Dataset 10. Fasta sequences of the B blocks (A. flavolineata). Dataset 11. Fasta sequences of B exclusive sequences (A. mexicanus). Dataset 12. Fasta sequences of B exclusive sequences (A. correntinus). Dataset 13. Fasta sequences of B exclusive sequences (A. flavolineata).
DOI: 10.6084/m9.figshare.12997126.v1
title: Additional file 4 of B chromosomes of multiple species have intense evolutionary dynamics and accumulated genes related to important biological processes

description: Additional file 4: Supplementary Datasets (Excel files may include multiple sheets for respective species). Dataset 1. A complete list of B blocks detected in A. mexicanus, A. correntinus and A. flavolineata. Dataset 2. Genes integrity percentage of the B blocks of A. mexicanus and A. correntinus. Dataset 3. A complete list of B-linked CDS with significant Log base 2 ratio in A. mexicanus, A correntinus and A. flavolineata. Dataset 4. List of B exclusive sequences detected in A. mexicanus, A. correntinus and A. flavolineata. Dataset 5. qPCR GDR ratio experiment CT values of representative B blocks in 0B, 1B and 2B of A. mexicanus. Dataset 6. Methylated B blocks and CpG Islands detected in A. mexicanus. Dataset 7. A complete list of enriched GO terms in all studied species. Dataset 8. Fasta sequences of the B blocks (A. mexicanus). Dataset 9. Fasta sequences of the B blocks (A. correntinus). Dataset 10. Fasta sequences of the B blocks (A. flavolineata). Dataset 11. Fasta sequences of B exclusive sequences (A. mexicanus). Dataset 12. Fasta sequences of B exclusive sequences (A. correntinus). Dataset 13. Fasta sequences of B exclusive sequences (A. flavolineata).
DOI: 10.6084/m9.figshare.12997274.v1
title: Additional file 2 of Phylogenomic analysis of Mycoplasma bovis from Belgian veal, dairy and beef herds

description: Additional file 2. Sequence identification and descriptives of 250 previously published Mycoplasma bovis sequences.
DOI: 10.6084/m9.figshare.12997271.v1
title: Additional file 1 of Phylogenomic analysis of Mycoplasma bovis from Belgian veal, dairy and beef herds

description: Additional file 1. Sequence identification and descriptives of Belgian Mycoplasma bovis isolates.
DOI: 10.6084/m9.figshare.12997274
title: Additional file 2 of Phylogenomic analysis of Mycoplasma bovis from Belgian veal, dairy and beef herds

description: Additional file 2. Sequence identification and descriptives of 250 previously published Mycoplasma bovis sequences.
DOI: 10.6084/m9.figshare.12997271
title: Additional file 1 of Phylogenomic analysis of Mycoplasma bovis from Belgian veal, dairy and beef herds

description: Additional file 1. Sequence identification and descriptives of Belgian Mycoplasma bovis isolates.
DOI: 10.6084/m9.figshare.12997363
title: Additional file 3 of The scope and extent of literature that maps threats to species: a systematic map protocol

description: Additional file 3. Search testing specifics: Details of every search attempted in the process of search string development in SCOPUS.
DOI: 10.6084/m9.figshare.12997363.v1
title: Additional file 3 of The scope and extent of literature that maps threats to species: a systematic map protocol

description: Additional file 3. Search testing specifics: Details of every search attempted in the process of search string development in SCOPUS.
DOI: 10.6084/m9.figshare.12997366.v1
title: Additional file 4 of The scope and extent of literature that maps threats to species: a systematic map protocol

description: Additional file 4. Data Coding Tool: The spreadsheet used for coding of meta-data, including descriptions of the topography and definitions to be used by reviewers.
DOI: 10.6084/m9.figshare.12997369.v1
title: Additional file 5 of The scope and extent of literature that maps threats to species: a systematic map protocol

description: Additional File 5. completed ROSES Form.
DOI: 10.6084/m9.figshare.12997366
title: Additional file 4 of The scope and extent of literature that maps threats to species: a systematic map protocol

description: Additional file 4. Data Coding Tool: The spreadsheet used for coding of meta-data, including descriptions of the topography and definitions to be used by reviewers.
DOI: 10.6084/m9.figshare.12997369
title: Additional file 5 of The scope and extent of literature that maps threats to species: a systematic map protocol

description: Additional File 5. completed ROSES Form.
DOI: 10.6084/m9.figshare.12997391.v1
title: Additional file 1 of Comparative transcriptome analysis revealed the cooperative regulation of sucrose and IAA on adventitious root formation in lotus (Nelumbo nucifera Gaertn)

description: Additional file 1: Fig. S1. Analysis of sequencing data saturation in CK0, CK1, GL20 and GL60 libraries.a. C0 library. b.CK1 library. c. GL20 library. d. GL60 library. Fig. S2. The correlation of gene expression between samples, especially for three repeated samples in CK0, CK1, GL20 and GL60 libraries respectively. Fig. S3. The patterns of gene expression in CK0, GL20 and GL60 libraries. Genes with similar expression pattern in those stages were classified into one cluster. Fig. S4. Fold change of gene expression in different libraries. Red points represented up-regulated DEGs, blue points represented down-regulated DEGs, and gray points represented non-DEGs. a. Gene expression in CK1/CK0 libraries. b.Gene expression in GL20/CK0 libraries. c. Gene expression in GL60/CK0 libraries. Fig. S5. Fold change of gene expression in different libraries. Red points represented up-regulated miRNAs, blue points represented down-regulated miRNAs, and gray points represented no change of miRNAs. a. miRNAs expression in CK1/CK0 libraries. b.miRNAs expression in GL20/CK0 libraries. c. miRNAs expression in GL60/CK0 libraries. Fig. S6. Identification of IAA and sucrose content during ARs Formation. a. determination of IAA content at 0 d, 2 d, 4 d and 6 d after treatment of 20 g/L and 60 g/L sucrose in the lotus seedlings. b. Identification of sucrose content at 0 d, 2 d, 4 d, 6 d and 8 d after treatment of 10 μmol/L and 150 μmol/L IAA in the lotus seedlings. Table S1. The primers of genes and miRNAs used for expression analysis by qRT-PCR technology. Table S2. The detailed information of tags in every library of gene or miRNA sequenced by RNA-seq technology. Table S3. Differentially expressed genes in CK1/CK0, GL20/CK0 and GL60/CK0 libraries. Table S4. Differentially expressed miRNAs in MCK1/MCK0, ZT20/MCK0, ZT60/MCK0, ZT20/MCK1 and ZT60/MCK1 libraries. Table S5. Association analysis of different expressed genes and miRNAs in MCK1/MCK0, ZT20/MCK0 and ZT60/MCK0 libraries. Table S6. The change of gene expression related with peroxidases in ZT20/ZT60 libraries.