cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.yntmhy
title: Occurrence Download

description: A dataset containing 338 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leucojum vernum",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 338 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042915-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/16hv-7zs1-ed0b
title: Sonic Anemometer at ABLE Beaumont Site Data. Version 1.0

description: This dataset contains ASCII output files of data collected by a sonic anemometer located at Beaumont, KS on the 10-m tower there as part of the ABLE instrumentation. For more information please see the readme file. The data files are contained in a single ZIP file.
DOI: 10.15468/dl.e54665
title: Occurrence Download

description: A dataset containing 372 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2016",
 "Geometry POLYGON ((-3.566106 48.80584, -3.563334 48.80861, -3.565278 48.81166, -3.57084 48.81277, -3.575556 48.81249, -3.579714 48.80972, -3.582783 48.80722, -3.582216 48.80389, -3.576663 48.80389, -3.566106 48.80584))"
 ]
}

 The dataset includes 372 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042918-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17256491
title: Master Thesis: Climate Sensitivity as a Determinant of Climate Tipping Risk - Data

description: This dataset contains all data used and generated during the master’s thesis "Climate Sensitivity as a Determinant of Climate Tipping Risk". It includes input data and proceeded results. Related Code is found in the subsequent GitHub repository.

 

Contents:



Temperature: Temperature Data Output from FaIR. Number order is the order of scenarios, where T_0 is for the lowest carbon concentration scenario and T_6 for the highest

tcrecs.txt: In FaIR generated TCR-ECS pair ensemble

ecs_timeseries: contains rearranged temperature data to be used as a more efficient input into PyCascades. One file per ECS

pycas_output.npy: collected PyCascades Output

risks_data.npy: results tabel with tipping risks for each scenario, ECS, in total and for each element.Structure: [ECS, Scenario, Risk: at least 1 tipped, Risk: at least 2 tipped, Risk: at least 3 tipped, Risk: all 4 tipped, AMOC Risk, WAIS Risk, AMAZ Risk]
DOI: 10.26023/q5y1-p7dm-pj0e
title: Sonic Anemometer - U.S. Army Acoustic. Version 1.0

description: This dataset contains files of data collected by a sonic anemometer for the CASES-99 field study. For more information please see the readme file.
DOI: 10.6084/m9.figshare.30271999
title: Class Practice 1, 2 & Cookies Data

description: Class Practice 1, 2 & Cookies Data
DOI: 10.6084/m9.figshare.30271999.v1
title: Class Practice 1, 2 & Cookies Data

description: Class Practice 1, 2 & Cookies Data
DOI: 10.34740/kaggle/dsv/13249546
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.9y6pkd
title: Occurrence Download

description: A dataset containing 118334 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((7.41293 49.34776,8.59879 43.65562,14.76528 44.60431,19.39015 39.18886,26.11004 40.37473,31.9603 46.89698,29.11423 50.09881,22.35481 51.44279,13.02601 51.67996,7.41293 49.34776))",
 "OccurrenceStatus is Present",
 "TaxonKey is Emberiza schoeniclus"
 ]
}

 The dataset includes 118334 records from 127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042887-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29950253
title: Impact of aging in bacterial endophthalmitis

description: Endophthalmitis is a serious complication of cataract surgery, for the aging population, and is associated with irreversible vision loss and its effect in endophthalmitis has not been fully elucidated. This study aimed to understand the pathobiology of bacterial endophthalmitis in association with age in a murine model as well as in patients with bacterial-endophthalmitis. Bacterial endophthalmitis was induced in aged and young (18–24 months and 6–8 weeks old) C57BL/6 mice, by intravitreal injection of <i>Pseudomonas aeruginosa</i>, followed by assessment of disease progression and enucleation at 24 h post-infection. Eyes were subjected to histopathological analysis along with assessment of inflammatory mediator levels by qPCR. Additionally, these cytokines were further validated in 10 patients with bacterial endophthalmitis, by MILLIPLEX assay, and correlated with their age. Both young and old mice were equally susceptible to <i>P. aeruginosa</i> infection, older mice exhibited higher clinical scores along with increased bacterial burden and inflammation, indicating enhanced disease severity. These findings were confirmed in human vitreous. Immune exacerbation was seen in older mice possibly due to inflammaging, during infection. Identification of pathways underlying altered innate immunity in aging eyes could provide new understandings into the pathology of bacterial endophthalmitis in older patients.
DOI: 10.6084/m9.figshare.29950253.v2
title: Impact of aging in bacterial endophthalmitis

description: Endophthalmitis is a serious complication of cataract surgery, for the aging population, and is associated with irreversible vision loss and its effect in endophthalmitis has not been fully elucidated. This study aimed to understand the pathobiology of bacterial endophthalmitis in association with age in a murine model as well as in patients with bacterial-endophthalmitis. Bacterial endophthalmitis was induced in aged and young (18–24 months and 6–8 weeks old) C57BL/6 mice, by intravitreal injection of <i>Pseudomonas aeruginosa</i>, followed by assessment of disease progression and enucleation at 24 h post-infection. Eyes were subjected to histopathological analysis along with assessment of inflammatory mediator levels by qPCR. Additionally, these cytokines were further validated in 10 patients with bacterial endophthalmitis, by MILLIPLEX assay, and correlated with their age. Both young and old mice were equally susceptible to <i>P. aeruginosa</i> infection, older mice exhibited higher clinical scores along with increased bacterial burden and inflammation, indicating enhanced disease severity. These findings were confirmed in human vitreous. Immune exacerbation was seen in older mice possibly due to inflammaging, during infection. Identification of pathways underlying altered innate immunity in aging eyes could provide new understandings into the pathology of bacterial endophthalmitis in older patients.
DOI: 10.6084/m9.figshare.29321641
title: Outcome of amniotic membrane transplantation for corneal diseases in a tertiary referral center

description: To investigate the outcome of amniotic membrane transplantation (AMT) performed in a tertiary referral cornea clinic and to define factors associated with reconstructive success. This retrospective analysis included 157 AMTs performed in 101 eyes of 96 adults. Only the first surgery of each eye (95 eyes of 90 patients) was included for statistical purposes. The primary outcome was post-operative epithelial closure within 8 weeks, and secondary outcomes were disease regression (8 weeks after epithelial closure) and re-AMT. Logistic regression models were used to assess (pre-)surgical variables for primary outcome. Eyes with limbal stem cell deficiency, pterygium or ocular surface neoplasia showed higher odds of epithelial closure within 8 weeks compared to eyes with ulcus (OR = 24.75, 95% CI 2.95–207.35, <i>p</i> = 0.0031). If corneal perforation was the indication for AMT surgery, this was associated with a decreased odds of primary healing compared to wound healing disorder (OR = 0.20, 95% CI 0.069–0.60, <i>p</i> = 0.004). Corneal disease recurrence was rare (two cases of corneal ulceration). AMT success is dependent on the severity of structural damage and related inflammation of the recipient cornea.
DOI: 10.6084/m9.figshare.29321641.v2
title: Outcome of amniotic membrane transplantation for corneal diseases in a tertiary referral center

description: To investigate the outcome of amniotic membrane transplantation (AMT) performed in a tertiary referral cornea clinic and to define factors associated with reconstructive success. This retrospective analysis included 157 AMTs performed in 101 eyes of 96 adults. Only the first surgery of each eye (95 eyes of 90 patients) was included for statistical purposes. The primary outcome was post-operative epithelial closure within 8 weeks, and secondary outcomes were disease regression (8 weeks after epithelial closure) and re-AMT. Logistic regression models were used to assess (pre-)surgical variables for primary outcome. Eyes with limbal stem cell deficiency, pterygium or ocular surface neoplasia showed higher odds of epithelial closure within 8 weeks compared to eyes with ulcus (OR = 24.75, 95% CI 2.95–207.35, <i>p</i> = 0.0031). If corneal perforation was the indication for AMT surgery, this was associated with a decreased odds of primary healing compared to wound healing disorder (OR = 0.20, 95% CI 0.069–0.60, <i>p</i> = 0.004). Corneal disease recurrence was rare (two cases of corneal ulceration). AMT success is dependent on the severity of structural damage and related inflammation of the recipient cornea.
DOI: 10.6084/m9.figshare.29321641.v3
title: Outcome of amniotic membrane transplantation for corneal diseases in a tertiary referral center

description: To investigate the outcome of amniotic membrane transplantation (AMT) performed in a tertiary referral cornea clinic and to define factors associated with reconstructive success. This retrospective analysis included 157 AMTs performed in 101 eyes of 96 adults. Only the first surgery of each eye (95 eyes of 90 patients) was included for statistical purposes. The primary outcome was post-operative epithelial closure within 8 weeks, and secondary outcomes were disease regression (8 weeks after epithelial closure) and re-AMT. Logistic regression models were used to assess (pre-)surgical variables for primary outcome. Eyes with limbal stem cell deficiency, pterygium or ocular surface neoplasia showed higher odds of epithelial closure within 8 weeks compared to eyes with ulcus (OR = 24.75, 95% CI 2.95–207.35, <i>p</i> = 0.0031). If corneal perforation was the indication for AMT surgery, this was associated with a decreased odds of primary healing compared to wound healing disorder (OR = 0.20, 95% CI 0.069–0.60, <i>p</i> = 0.004). Corneal disease recurrence was rare (two cases of corneal ulceration). AMT success is dependent on the severity of structural damage and related inflammation of the recipient cornea.
DOI: 10.6084/m9.figshare.29500407
title: Intracameral antibiotics for endophthalmitis prophylaxis in cataract surgery: a meta-analysis

description: Despite numerous studies, there is no consensus on the use of intracameral (IC) antibiotics to prevent postoperative endophthalmitis (POE) after cataract surgery. A systematic search of Ovid MEDLINE, EMBASE, and Cochrane CENTRAL (inception–April 2021; PROSPERO ID: CRD42021248702) identified studies reporting POE risk in eyes treated with or without IC antibiotics. Study quality was assessed using the Cochrane risk-of-bias tool and Newcastle-Ottawa Scale. Meta-analysis was conducted using a random-effects model. Among 23 studies (2 RCTs, 21 observational; 5,442,686 eyes), POE incidence was lower with IC antibiotic use (0.038% vs. 0.096%, RR: 0.15, CI: [0.10, 0.23], ARR: 0.058, p &lt; 0.001). In phacoemulsification cases, POE was 0.043% with IC antibiotics vs. 0.14% without (RR: 0.11, CI: [0.06, 0.20], ARR: 0.097, p &lt; 0.001). POE risk was lower with combined IC and topical antibiotics (0.02% vs. 0.056%, RR: 0.40, p &lt; 0.001). Gram-positive bacteria were more common in POE cases without IC antibiotics; gram-negatives were more frequent with IC use. IC antibiotics reduced POE risk, though evidence quality was low to very low due to potential confounding. More rigorous studies accounting for surgical technique, antiseptic use, and adjunctive antibiotics are needed.
DOI: 10.6084/m9.figshare.29950253.v1
title: Impact of aging on endophthalmitis

description: Endophthalmitis is a serious complication of cataract surgery, for the aging population, and is associated with irreversible vision loss and its effect in endophthalmitis has not been fully elucidated. This study aimed to understand the pathobiology of bacterial endophthalmitis in association with age in a murine model as well as in patients with bacterial-endophthalmitis. Bacterial endophthalmitis was induced in aged and young (18-24 months and 6-8 weeks old) C57BL/6 mice, by intravitreal injection of Pseudomonas aeruginosa, followed by assessment of disease progression and enucleation at 24 h post-infection. Eyes were subjected to histopathological analysis along with assessment of inflammatory mediator levels by qPCR. Additionally, these cytokines were further validated in 10 patients with bacterial endophthalmitis, by MILLIPLEX assay, and correlated with their age. Both young and old mice were equally susceptible to P. aeruginosa infection, older mice exhibited higher clinical scores along with increased bacterial burden and inflammation, indicating enhanced disease severity. These findings were confirmed in human vitreous. Immune exacerbation was seen in older mice possibly due to inflammaging, during infection. Identification of pathways underlying altered innate immunity in aging eyes could provide new understandings into the pathology of bacterial endophthalmitis in older patients.
DOI: 10.6084/m9.figshare.29500407.v1
title: Intracameral antibiotics for endophthalmitis prophylaxis in cataract surgery: a meta-analysis

description: Despite numerous studies, there is no consensus on the use of intracameral (IC) antibiotics to prevent postoperative endophthalmitis (POE) after cataract surgery. A systematic search of Ovid MEDLINE, EMBASE, and Cochrane CENTRAL (inception–April 2021; PROSPERO ID: CRD42021248702) identified studies reporting POE risk in eyes treated with or without IC antibiotics. Study quality was assessed using the Cochrane risk-of-bias tool and Newcastle-Ottawa Scale. Meta-analysis was conducted using a random-effects model. Among 23 studies (2 RCTs, 21 observational; 5,442,686 eyes), POE incidence was lower with IC antibiotic use (0.038% vs. 0.096%, RR: 0.15, CI: [0.10, 0.23], ARR: 0.058, p &lt; 0.001). In phacoemulsification cases, POE was 0.043% with IC antibiotics vs. 0.14% without (RR: 0.11, CI: [0.06, 0.20], ARR: 0.097, p &lt; 0.001). POE risk was lower with combined IC and topical antibiotics (0.02% vs. 0.056%, RR: 0.40, p &lt; 0.001). Gram-positive bacteria were more common in POE cases without IC antibiotics; gram-negatives were more frequent with IC use. IC antibiotics reduced POE risk, though evidence quality was low to very low due to potential confounding. More rigorous studies accounting for surgical technique, antiseptic use, and adjunctive antibiotics are needed.
DOI: 10.15468/dl.f9q3zm
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Narcissus triandrus",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042922-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j3ckad
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Narcissus triandrus",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042920-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/2phm-sj3f-sy10
title: Eddy Correlation Data. Version 1.0

description: This dataset contains NetCDF data collected by two eddy correlation systems, one at 10m height and the other at 3m. This data was collected at a sampling rate of 20Hz. Processed eddy correlation data is also available in a companion dataset(45.601)
DOI: 10.5281/zenodo.17250455
title: Master Thesis: Climate Sensitivity as a Determinant of Climate Tipping Risk - Data

description: This dataset contains all data used and generated during the master’s thesis "Climate Sensitivity as a Determinant of Climate Tipping Risk". It includes input data and proceeded results. Related Code is found in the subsequent GitHub repository.

 

Contents:



Temperature: Temperature Data Output from FaIR. Number order is the order of scenarios, where T_0 is for the lowest carbon concentration scenario and T_6 for the highest

tcrecs.txt: In FaIR generated TCR-ECS pair ensemble

ecs_timeseries: contains rearranged temperature data to be used as a more efficient input into PyCascades. One file per ECS

pycas_output.npy: collected PyCascades Output

risks_data.npy: results tabel with tipping risks for each scenario, ECS, in total and for each element.Structure: [ECS, Scenario, Risk: at least 1 tipped, Risk: at least 2 tipped, Risk: at least 3 tipped, Risk: all 4 tipped, AMOC Risk, WAIS Risk, AMAZ Risk]
DOI: 10.15468/dl.capzz7
title: Occurrence Download

description: A dataset containing 46934163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acacia mearnsii, Acridotheres tristis, Aedes albopictus, Anopheles quadrimaculatus, Anoplolepis gracilipes, Anoplophora glabripennis, Aphanomyces astaci, Ardisia elliptica, Arundo donax, Asterias amurensis, Banana bunchy top virus, Batrachochytrium dendrobatidis, Bemisia tabaci, Boiga irregularis, Capra hircus, Carcinus maenas, Caulerpa taxifolia, Cecropia peltata, Cercopagis pengoi, Cervus elaphus, Chromolaena odorata, Cinara cupressi, Cinchona pubescens, Clarias batrachus, Coptotermes formosanus, Cryphonectria parasitica, Cyprinus carpio, Dreissena polymorpha, Eleutherodactylus coqui, Eriocheir sinensis, Euglandina rosea, Euphorbia esula, Felis catus, Gambusia affinis, Hedychium gardnerianum, Hiptage benghalensis, Imperata cylindrica, Lantana camara, Lates niloticus, Leucaena leucocephala, Ligustrum robustum, Linepithema humile, Lissachatina fulica, Lithobates catesbeianus, Lymantria dispar, Lythrum salicaria, Macaca fascicularis, Melaleuca quinquenervia, Miconia calvescens, Miconia crenata, Micropterus salmoides, Mikania micrantha, Mimosa pigra, Mnemiopsis leidyi, Mus musculus, Mustela erminea, Myocastor coypus, Morella faya, Mytilus galloprovincialis, Oncorhynchus mykiss, Ophiostoma ulmi, Opuntia stricta, Oreochromis mossambicus, Oryctolagus cuniculus, Pheidole megacephala, Phytophthora cinnamomi, Pinus pinaster, Plasmodium relictum, Platydemus manokwari, Pomacea canaliculata, Pontederia crassipes, Potamocorbula amurensis, Prosopis glandulosa, Psidium cattleianum, Pueraria montana lobata, Pycnonotus cafer, Rattus rattus, Reynoutria japonica, Rhinella marina, Rubus ellipticus, Salmo trutta, Salvinia molesta, Schinus terebinthifolia, Sciurus carolinensis, Solenopsis invicta, Spathodea campanulata, Sphagneticola trilobata, Sporobolus anglicus, Sturnus vulgaris, Sus scrofa, Tamarix ramosissima, Trachemys scripta elegans, Trichosurus vulpecula, Trogoderma granarium, Ulex europaeus, Undaria pinnatifida, Herpestes javanicus auropunctatus, Vespula vulgaris, Vulpes vulpes, Wasmannia auropunctata)",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 46934163 records from 13286 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042749-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ihnfyj
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2000-2019",
 "Geometry POLYGON((122.87109 -32.84267,117.94922 -36.31513,119.70703 -46.55886,133.06641 -47.5172,143.61328 -46.31658,143.96484 -38.54817,136.58203 -32.84267,131.66016 -30.44867,128.49609 -31.05293,122.87109 -32.84267))",
 "HasCoordinate is true",
 "TaxonKey is Sphyrna lewini (Griffith & Smith, 1834)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015771-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvxess
title: Occurrence Download

description: A dataset containing 1366 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Batrachuperus tibetanus Schmidt, 1925"
 ]
}

 The dataset includes 1366 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121087-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5aywen
title: Occurrence Download

description: A dataset containing 1672 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Engelhardia roxburghiana Wall."
 ]
}

 The dataset includes 1672 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051997-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.owmvrh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Passiflora truxillensis Planch. & Linden ex Triana & Planch."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015775-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9rb7y8
title: Occurrence Download

description: A dataset containing 3356957 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Malvaceae"
 ]
}

 The dataset includes 3356957 records from 4834 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057657-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.