cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.p2v3c/2
title: Tiller_phenotypes

description: Tiller hydroponic assay measurements
DOI: 10.5061/dryad.p2v3c/3
title: Seedling_phenotypes

description: seedling hydroponic assay data
DOI: 10.5061/dryad.p2v3c/4
title: Snp_flanks

description: flanking sequences of snps genotyped using MassArray platform
DOI: 10.5061/dryad.p2v3c/5
title: Polyploid-0.3.2_Public

description: R scripts used for clustering and genotype calling of MassArray data.
DOI: 10.5061/dryad.7k22p/4
title: male_female_comp
DOI: 10.5061/dryad.7k22p/5
title: Stan
DOI: 10.5061/dryad.g7b40/1
title: Does Hugging Provide Stress-Buffering Social Support_replication data set
DOI: 10.5061/dryad.g7b40/2
title: Does Hugging Provide Stress-Buffering Social Support_replication syntax

description: The replication data set is provided as an annotated SPSS data file (.SAV), and contains all variables necessary to conduct the analyses reported on in the associated publication.  Data are represented by 57 variables, which are described in detail in the code book that appears in the attached README.pdf document.  The code book provides a descriptive label for each variable, as well as value labels for categorical and dichotomous variables (when necessary).  Missing data are represented by empty cells.The data set includes both input variables and variables that were created from the input dats.  The latter are indicated with an asterisk (*).  Information on the algorithms used for creating computed variables is provided in the associated manuscript.Included alongside the data set is an SPSS syntax file (.sps) that includes code for all analyses reported in the manuscript’s results section.
DOI: 10.5061/dryad.m010p/1
title: paleoTS files - zip archive

description: This zip archive holds 771 plain text files in paleoTS format.  Each stores the raw data for a trait time-series, with columns for trait sample sizes, trait means, trait variances, and sample ages.
DOI: 10.5061/dryad.m010p/2
title: paleoTS data - RData format

description: Same data as 'paleoTS files.zip', but all combined into a single file readable by R. Double-clinking this file will open R and make available in the R Workspace an object called 'tsList' which is a list of the 771 time-series (paleoTS) objects.
DOI: 10.5061/dryad.m010p/3
title: paleoTS summary - XLSX format

description: Excel spreadsheet with auxiliary data for these files, including the number of samples, environmental context, and taxonomic group of the fossils.  Includes also reference information for the published papers from which these data were drawn.
DOI: 10.5061/dryad.m010p/4
title: paleoTS summary - CSV format

description: Same as paleoTS 'summary.xlsx' but in Comma-separated-value format.
DOI: 10.5061/dryad.s926r/1
title: Suplementary file for: Possible influence of B chromosomes on genes included in immune response and parasite burden in Apodemus flavicollis

description: Host-related (sex, age, body condition index, presence of Bs in genotype, expression of other genes) and parasite-related (number of adult parasites of each identified species, egg count of each parasite genus, total number of nematode individuals) variables used in analysis.
DOI: 10.5061/dryad.j7049/1
title: Alligator_Capture_Isotope_Data

description: Capture information, biological data, and isotopic data from individual Alligator mississippiensis captured during this study.
DOI: 10.5061/dryad.j7049/2
title: Alligator_GPS_Capure_Location_Data

description: Latitude and Longitude of capture locations for A. mississippiensis
DOI: 10.5061/dryad.j7049/3
title: Alligator_Stomach_Content_Data

description: A. mississippiensis stomach content data.
DOI: 10.5061/dryad.j7049/4
title: Alligator_Survey_Data

description: Nightlight count survey data
DOI: 10.5061/dryad.j7049/5
title: Prey_Habitat_Isotope_Collection_Site_Data

description: Latitude and longitude of collecting sites for stable isotope samples of primary producers and prey species.
DOI: 10.5061/dryad.j7049/6
title: Prey_Isotope_Data

description: Stable isotope values determined for prey species.
DOI: 10.5061/dryad.j7049/7
title: Primary_Producer_Isotope_Data

description: Stable isotope values determined for primary producer species.
DOI: 10.5061/dryad.j7049/8
title: Salinity_Data

description: Water salinity during time of this study.
DOI: 10.5061/dryad.m010p/5
title: paleoTS references

description: Same as information in second worksheet of  "paleoTS summary.xlsx", here separated out as CSV format.
DOI: 10.5061/dryad.j7049/10
title: SIAR_posterior_Sub_Adult_Data

description: SIAR posterior distributions for sub-adult alligators.
DOI: 10.5061/dryad.j7049/11
title: SIAR_posterior_Large_Juvenile_data

description: SIAR posterior distributions for large juvenile alligators.
DOI: 10.5061/dryad.j7049/12
title: SIAR_posterior_Small_Juvenile_Data

description: SIAR posterior distributions for small juvenile alligators
DOI: 10.5061/dryad.j7049/13
title: SIAR_Simple_Mean_Source_Data

description: Isotope values determined for SIAR sources calculated using simple mean across all prey species.
DOI: 10.5061/dryad.j7049/14
title: SIAR_Weighted_Source_Mean_Data

description: Isotope values for SIAR sources calculated using a weighted mean by recovered mass of prey.
DOI: 10.5061/dryad.j7049/15
title: Trophic_Enrichment_Factors_TEFs

description: Trophic enrichment factors used in SIAR analyses
DOI: 10.5061/dryad.j7049/9
title: SIAR_Posterior_Adult_Data

description: SIAR posterior distributions for adult alligators.
DOI: 10.5061/dryad.057r9/1
title: raw data for phenotype assays

description: This Excel file contains the raw data for the phenotype assays.
DOI: 10.5061/dryad.2tr22/1
title: SSS model source code: header file
DOI: 10.5061/dryad.2tr22/2
title: SSS model source code: cpp file
DOI: 10.5061/dryad.2tr22/3
title: Mate-choice model source code: header file
DOI: 10.5061/dryad.2tr22/4
title: Mate-choice model source code: cpp file
DOI: 10.5061/dryad.3g1h2/1
title: RF_analysis_Data1
DOI: 10.5061/dryad.567pt/1
title: ToolsK_archive

description: Data collected from children in kindergarten classrooms in schools randomly assigned to implement the Tools of the Mind kindergarten program or to a business as usual control condition
DOI: 10.5061/dryad.6m00v/1
title: data Barrett et al JEcol 2014
DOI: 10.5061/dryad.j6567/1
title: Search strings and scripts for analyzing literature trends

description: Web of Science search strings, MySQL scripts, and other miscellaneous files used to analyze full article records for literature trends on use of genetic markers.
DOI: 10.5061/dryad.06bb5/1
title: Scientific names and numerical id of the plant, aphid and parasitoids species studied

description: Include the scientific name of all the plant, aphid and parasitoids species as well as the id for each species and the site id where the data was collected
DOI: 10.5061/dryad.06bb5/2
title: id for each site and plant, aphid and parasitoid species

description: Include the id for each site and plant, aphid and parasitoid species
DOI: 10.5061/dryad.06bb5/3
title: Total number of tritrophic chains and the species composition of each chain

description: Include total number of tritrophic chains and the species composition of each chain
DOI: 10.5061/dryad.06bb5/4
title: Geographic pairwise Euclidean distance for the 302 sampled sites

description: Include the geographic pairwise Euclidean distance for the 302 sampled sites
DOI: 10.5061/dryad.90005/1
title: Tseng&Flynn_Herpestes_FEMs

description: Individual Finite Element models in the 3 datasets described in Tseng and Flynn. All files are loaded with simulated muscle forces using BoneLoad. All models are in the Strand7 (*.st7) format, version 2.4.6.
DOI: 10.5061/dryad.kk65m/1
title: Rodriguez etal BJLS vervet allometry data

description: Complete data set from which allometry was characterized
DOI: 10.5061/dryad.kk65m/2
title: Rodriguez et al BJLS vervet allometry trait types

description: Allometric slopes and condition dependence values by trait category
DOI: 10.5061/dryad.n9h5p/1
title: Grieshop and Polak 2014 Dryad
DOI: 10.5061/dryad.27c5b/1
title: Experimental design and planted data

description: Sown species in each plot in 2009, and the ID of invaded subplots in 2010. See Fig. S1 for a diagram showing the experimental design.
DOI: 10.5061/dryad.27c5b/2
title: Harvest data for analysis

description: data for analysis, including native species richness, MPD, NPD, total native biomass, invader density, invader size and biomass for each invaded subplot.
DOI: 10.5061/dryad.27c5b/3
title: Soil enzyme data

description: The activities of eight soil enzymes in the monocultures. One soil sample was collected from each invaded subplot at each of the following two time points respectively: April 2009 (immediately before sowing) and September 2009 (after the first growth season).
DOI: 10.5061/dryad.27c5b/4
title: Soil nutrient data

description: Sixteen metrics of nutrient profile of the soil samples in the monocultures. One soil sample was collected from each invaded subplot at each of the following two time points respectively: April 2009 (immediately before sowing) and September 2009 (after the first growth season).
DOI: 10.5061/dryad.27c5b/5
title: Bayesian_phylogeny

description: Bayesian phylogeny of the 16 resident plant species and the invader (Ambrosia artemisiifolia) used in this study. The tree was constructed based on three DNA regions (rbcL, matK and ITS).
DOI: 10.5061/dryad.7qs06/1
title: Boogert et al. Raw Data

description: This datafile contains three worksheets. The first worksheet displays all the PIT-tag data as automatically recorded by the PIT-tag readers integrated in the bird feeder entrances (or 'antennae'; column E). The second worksheet contains information on the relatedness of birds, their life history traits, sex (1=male, 0=female) and CORT-treatment (1 = fed with CORT, 0 = control, NA=adult). The third worksheet contains info on the leg band numbers worn by the birds (referred to in the first worksheet) and their indices as reported in the second worksheet. Note that ID 100 refers to the experimenter (NJB).
DOI: 10.5061/dryad.p100g/1
title: SL-4 genome sequence

description: Gene locus of SCAP in SL-4 mutant. This sequence is related to Fig.3
DOI: 10.5061/dryad.616gv/1
title: Morphometrical analysis of the AVPV

description: This file contains the results of morphometrical analysis of the AVPV in adult AromKO, αERKO, βERKO, and ARKO mice of both sexes
DOI: 10.5061/dryad.616gv/2
title: Morphometrical analysis of the BNSTp

description: This file contains the results of morphometrical analysis of the BNSTp in adult ARKO mice of both sexes and male ARKO mice treated neonatally with testosterone propionate
DOI: 10.5061/dryad.616gv/3
title: Analysis of gene expression in the AVPV of perinatal mice

description: This file contains the results of gene expression analysis using real-time PCR in the AVPV of perinatal WT and ARKO mice
DOI: 10.5061/dryad.616gv/4
title: Analysis of gene expression in the BNSTp of perinatal mice

description: This file contains the results of gene expression analysis using real-time PCR in the BNSTp of perinatal WT and ARKO mice
DOI: 10.5061/dryad.h4n48/1
title: dryad submission
DOI: 10.5061/dryad.s9v06/1
title: Raw Ion Torrent reads in FASTQ format

description: Raw Ion Torrent reads in FASTQ format
DOI: 10.5061/dryad.s9v06/2
title: Decoding table and an alignment of the MHC class II DAB haplotypes

description: Decoding table and an alignment of the MHC class II DAB haplotypes
DOI: 10.5061/dryad.s9v06/3
title: Input files for MrBayes, BEAST, Newhybrids, and BAPS

description: Input files for MrBayes, BEAST, Newhybrids, and BAPS
DOI: 10.5061/dryad.v2k50/1
title: Plant biomass and bulbil weight measurements

description: Bistorta vivipara biomass data from Experiment 1 and Experiment 2. Dry weight of Bistorta vivipara bulbils collected from 450 m, 700 m, and 900 m elevation (Abisko).
DOI: 10.5061/dryad.83452/1
title: visual parameters during tiger beetle prey pursuit

description: Contains frame-by-frame data of visual parameters experienced by a tiger beetle when chasing a prey dummy. Variables were calculated from coordinates determined in each video frame, and smoothed using a 3-frame moving average. "Open" and "close" columns indicate frames where jaw opening/closing begins, with a lag of 0 to 20 frames before that event.
DOI: 10.5061/dryad.974k0/1
title: Model output by country and indicator

description: This Excel file contains the output of the model for each of the countries by indicator and year.
DOI: 10.5061/dryad.974k0/2
title: Goals_Country_Files

description: This is a compressed file that contains the Spectrum Goals files for the 23 countries that have been modeled. Each country file is also a compressed file with the extension PJNZ. These files can be opened with the Spectrum program.
DOI: 10.5061/dryad.m484p/1
title: The positive association of serum gamma-glutamyltranspeptidase with atherosclerosis in females, not in males: a population based large scale cross-sectional study

description: Objective: The purpose of this study was to determine the relationship between serum gamma-glutamyltranspeptidase (GGT) and brachial-ankle pulse wave velocity (baPWV) as an indicator for atherosclerosis in Japanese males and females after adjusting fatty liver.
Design: A cross-sectional study.
Setting: A health checkup center in Japan.
Participants: 846 Japanese males and females aged 24-84 years recruited from people who received a medical health checkup program with a standardized questionnaire and an automatic waveform analyzer to measure baPWV. 
Main outcome measures: We measured serum GGT concentrations and baPWV. Fatty liver was diagnosed by a standardized criteria using with abdominal ultrasonography. The postmenopausal state was defined as beginning 1 year after the cessation of menses.
Results: In females, log2 GGT was positively associated with baPWV (β=0.11, 95% confidence interval (CI) 0.02-0.19, p&lt;0.05) independent on age, BMI, systolic blood pressure, fasting plasma glucose, triglycerides, estimated glomerular ratio, fatty liver, menopausal state and parameters of life styles. However, in males, the positive association of log2 GGT with baPWV was not significant (β=-0.04, 95% CI -0.10-0.03, p=0.28) in multivariable linear regression analyses.
Conclusions: The serum GGT level was associated with baPWV independently on co -variate including fatty liver or menopausal state just in females, but not in males. When the elevation of GGT was observed in females at clinical practice, we should check them using with some screening tests for atherosclerosis including baPWV.
DOI: 10.5061/dryad.nh7f4/1
title: PLOSsyph

description: This is an ASCII file that is space delimited that was created in SAS.  It has the variables that were used in the published paper.  The readme.sas file is a .sas file that reads the data.  You will need to change the infile statement to reflect the path to where you put the data.
DOI: 10.5061/dryad.s9v06/4
title: Bioclimatic layers used for species distribution modelling

description: Bioclimatic layers used for species distribution modelling
DOI: 10.5061/dryad.v883p/1
title: Liftover file to convert D. simulans version 2 genome coordinates to D. melanogaster v5 (dm3) coordinates

description: Liftover file for use with UCSC liftOver utility for converting genomic coordinates of the version 2 D. simulans genome (Hu et al 2012) to version 5 (dm3) D. melanogaster genome.
DOI: 10.5061/dryad.v883p/2
title: Anntotated VCF file

description: Annotated VCF file containing allele frequency and read depths of the 14 samples described in Bergland et al. Annotations include p- and q-values from models of seasonality and clinality; genic annotations; average frequencies; and, quality filters. This VCF file only contains SNPs with average minor allele frequency &gt; 0.15.
DOI: 10.5061/dryad.4kh67/1
title: SupplementalDataset1

description: Supplemental Dataset 1: Gene level information for the three tissues including start/stop, chromosome, interpro descriptions, rice and Arabidopsis homologs, selection score from Hufford 2012, depth at segregating sites, binomial and Fisher's exact test p-values, and regulatory category.
DOI: 10.5061/dryad.4kh67/2
title: SupplementalDataset2

description: Supplemental Dataset 2: Gene level counts for the three experimental tissues for each individual maize x teosinte comparison. Data includes depth at segregating sites, number of SNPs, log2 maize:teosinte ratios, binomial test p-values, and amount of sequence obtained.
DOI: 10.5061/dryad.b4mr5/1
title: BarnOwlABC_Antoniazza_2014
DOI: 10.5061/dryad.r0d1q/1
title: Caestuarii_genotypes

description: Microsatellite genotypes for 431 Carcinus aestuarii individuals from 8 population samples.
DOI: 10.5061/dryad.r0d1q/2
title: Lagrangian_simulations_code&settings

description: Compressed archive (.zip) containing the source code and settings used for Lagrangian simulations.
DOI: 10.5061/dryad.vv277/1
title: Full data, blacknose shark

description: Locations, mtdNA haplotypes and microsatellite genotypes
DOI: 10.5061/dryad.vv277/2
title: mtDNA haplotypes
DOI: 10.5061/dryad.1q0h6/1
title: Frantz_Mathematica_NoteBook
DOI: 10.5061/dryad.1q0h6/2
title: 500b_flt_counts

description: Mutational configurations for 500bp blocks
DOI: 10.5061/dryad.1q0h6/3
title: 1kb_flt_counts

description: Mutational configurations for 1kb blocks
DOI: 10.5061/dryad.66v6q/1
title: Reproductive trait data from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Excel spreadsheet has three tabs: “FemaleReprod,” “SpermTraits,” and “SpermComp Exp.” FemaleReprod contains data on sire, dam and sire x dam mitochondrial haplogroup effects on female fecundity and reproductive success. SpermTraits contains data on male mitochondrial haplogroup effects on sperm number and sperm viability. SpermComp Exp contains paternity data for the A versus B2 haplogroup sperm competition experiment.
DOI: 10.5061/dryad.66v6q/2
title: Whole mitochondrial genome alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial genome (excluding the control region) sequences.
DOI: 10.5061/dryad.cc5kn/1
title: pairwise alignments of mtDNAs of domestic animals
DOI: 10.5061/dryad.vm060/1
title: Morphological data from two medaka populations

description: Raw morphological data from Tanabe and Maegok populations.
DOI: 10.5061/dryad.vm060/2
title: F2_Phenotype_and_Genotype_data

description: Raw morphological data, genetic sex, and CYP1B1 genotypes from F2 individuals.
DOI: 10.5061/dryad.vm060/3
title: Enzyme Activities of CYP1A and CYP1B1 alleles

description: Raw and relative enzyme activities of CYP1A and CYP1B1 alleles
DOI: 10.5061/dryad.66v6q/10
title: Mitochondrial ND2 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial ND2 gene sequences.
DOI: 10.5061/dryad.66v6q/3
title: Mitochondrial ATP6 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial ATP6 gene sequences.
DOI: 10.5061/dryad.66v6q/4
title: Mitochondrial ATP8 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial ATP8 gene sequences.
DOI: 10.5061/dryad.66v6q/5
title: Mitochondrial COX1 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial COX1 gene sequences.
DOI: 10.5061/dryad.66v6q/6
title: Mitochondrial COX2 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial COX2 gene sequences.
DOI: 10.5061/dryad.66v6q/7
title: Mitochondrial COX3 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial COX3 gene sequences.
DOI: 10.5061/dryad.66v6q/8
title: Mitochondrial CYTB gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial CYTB gene sequences.
DOI: 10.5061/dryad.66v6q/9
title: Mitochondrial ND1 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial ND1 gene sequences.
DOI: 10.5061/dryad.66v6q/11
title: Mitochondrial ND3 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial ND3 gene sequences.
DOI: 10.5061/dryad.66v6q/12
title: Mitochondrial ND4 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial ND4 gene sequences.
DOI: 10.5061/dryad.66v6q/13
title: Mitochondrial ND4L gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial ND4L gene sequences.
DOI: 10.5061/dryad.66v6q/14
title: Mitochondrial ND5 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial ND5 gene sequences.
DOI: 10.5061/dryad.66v6q/15
title: Mitochondrial ND6 gene alignment from: Sisters’ curse: sexually antagonistic effects constrain the spread of a mitochondrial haplogroup superior in sperm competition

description: This Nexus file contains a MAFT alignment of 15 Cordylochernes scorpioides mitochondrial ND6 gene sequences.
DOI: 10.5061/dryad.pp67h/1
title: Bain et al data

description: All data from this study, organised into four tabs: ReadMe, Broods, Chicks and Genotypes
DOI: 10.5061/dryad.pp67h/2
title: FinalAnalyses

description: R script containing all code necessary to repeat the analyses reported in the paper.
DOI: 10.5061/dryad.qf1dp/1
title: Brain derived contigs

description: These are the contigs derived from the RNA collected from brain tissue.
DOI: 10.5061/dryad.qf1dp/2
title: Kidney derived contigs

description: Putative transcripts from renal tissue.
DOI: 10.5061/dryad.qf1dp/3
title: Liver derived transcripts

description: Putative transcripts from liver tissue.