cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14544050
title: MPI-driven reduced-Mediterranean RegCM5-BATS CP paleoclimate simulations

description: This dataset comprises five convection-permitting (CP) 10-year experiments, including paleoclimate simulations, conducted using the Regional Climate Model, RegCM5. The model is configured with the BATS land surface scheme and driven by CMIP6 MPI-ESM1-2-LR model data. The five experiments are: historical (1995-2004); Pre-Industrial (1850-1859); Year 1000 (1000-1009); Mid-Holocene (1241-1250*); Last Glacial Maximum (2090-2099*). [*Note: years marked with * do not correspond to the actual year.]

The dataset includes the namelists for the intermediate 0.44° extra-European and 0.11° EURO-CORDEX simulations, as well as the high-resolution 0.03° CP simulation over a reduced Mediterranean domain. The provided NetCDF files contain the fixed orography variable and daily outputs of precipitation, near-surface air temperature, and surface wind speed for all five simulations.

This dataset is evaluated in the upcoming study “Evaluation of Convection-Permitting Paleoclimate Simulations with Climate-Driven Land-Use Mapping for the Central Mediterranean,” which is currently in preparation.

The corresponding evaluation simulation can be accessed at: https://doi.org/10.5281/zenodo.14537964.

This dataset is part of the Marie Skłodowska-Curie Actions Postdoctoral Fellowship project PALEOSIM: https://www.um.edu.mt/projects/paleosim/ ; https://doi.org/10.3030/101062427.

Funded by the European Union. Views and opinions expressed are however those of the authors only and do not necessarily reflect those of the European Union or Marie Skłodowska-Curie Actions. Neither the European Union nor the granting authority can be held responsible for them.
DOI: 10.5281/zenodo.11309489
title: Coordinated function of paired NLRs confers Yr84 mediated stripe rust resistance in wheat
DOI: 10.5281/zenodo.15065937
title: Data for: Biochar with immobilized bacteria increased phthalate biodegradation in the soil and lowered their bioavailability to lettuce

description: MRM data for six priority PAEs in the soil and lettuce samples under biochar-amended soil using immobilized bacteria.
DOI: 10.5281/zenodo.11235373
title: Data from: mPRIME Study - Interaction of Insulin Resistance with Cognition, Lifestyle, and Mental Health

description: The presented datasets were collected within the mPRIME study, a prospective, observational study of the H2020 project Prevention and Remediation of Insulin Multimorbidity in Europe (PRIME) (grant No. 847879). The study investigates the interaction of insulin resistance with cognition, lifestyle, and mental health by combining traditional methods with ambulatory assessment and sensor-based data collection. Recruitment took place between March 2021 and March 2023 at the University Hospital Frankfurt, Germany.

The eligibility criteria for the study were as follows: Age above 18 years, no intake of antidiabetic medication, insulin or glucocorticoids, no existing type 1 diabetes mellitus or gestational diabetes, no diagnoses of bipolar I disorder, schizophrenia, organically caused mental disorders and substance dependence, no severe neurological disorders, no current pregnancy or breastfeeding, no non-correctable visual impairments, no participation in medication-related studies within the last 6 months, no use of weight-reducing medications or a diet within the last 3 months, sufficient proficiency in German to complete questionnaires and neuropsychological tests.

All participants in the mPRIME study provided written informed consent. The study protocol and procedures were approved by the local ethics committee.

Study Design

Individuals completed a baseline assessment and a one-week ambulatory assessment. The baseline assessment included: socio-demographic information, blood samples, anthropometric measures, neuropsychological tests, and several questionnaires. In addition, individuals were introduced to smartphone-based ecological momentary assessment (EMA), food protocols, and the use of sensors (continuous glucose monitor, accelerometer). Food protocols and EMA were conducted on three consecutive days, including two weekdays and one weekend day (Thursday to Saturday or Sunday to Tuesday). Several times a day, individuals were prompted via their smartphone to complete a working memory task and answer questions about stress, affect, and food intake. The continuous glucose monitor and accelerometer were worn continuously for 1 week.

 
description: Abbott Diabetes Care (Alameda, United States of America) donated devices for the mPRIME study. The funding sources have had no involvement in the study design, data collection, interpretation of the findings, or writing of this manuscript
DOI: 10.5281/zenodo.11400616
title: Original data of 《Coral hosts actively accumulate inorganic carbon for zooxanthellae to maintain symbiotic relationships》
DOI: 10.5281/zenodo.10951555
title: Basic Needs and Student Success Survey (Pilot 2)

description: Food insecurity among college students is a serious problem that can impact student performance in the classroom and ultimately effect student success. The Center for Healthy Communities (CHC) developed the Basic Needs Student Success Survey (BNS3) and administered it to undergraduate students participating in the Educational Opportunity Program (EOP) at three California State Universities between November 2020 and March 2021. 

The purpose of this second cross-sectional pilot study was to revise the BNS3 tool and validate student perception of the following:



The impact of receiving CalFresh assistance.

The impact of utilization of the campus food pantry on their health, nutrition, cooking confidence, time management and academic performance.


This entry contains 



The anonymized and cleaned data set

A codebook (data dictionary)

The survey tool as a Qualtrics export to Word file
DOI: 10.15468/dl.2hgvm5
title: Occurrence Download

description: A dataset containing 1850590 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Country is France",
 "HasCoordinate is true",
 "Year is greater than or equal to 2024"
 ]
}

 The dataset includes 1850590 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006998-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2zyac4
title: Occurrence Download

description: A dataset containing 9863 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Castor fiber",
 "Country is Germany",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year 2019-2024"
 ]
}

 The dataset includes 9863 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006928-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.96ndsh
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Calotriton arnoldi)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 115 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006929-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7et5wk
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Brazil, Australia)",
 "OccurrenceStatus is Present",
 "TaxonKey is Cadophora luteo-olivacea"
 ]
}

 The dataset includes 22 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006931-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17864/1947.001487
title: ReMINDS-SPaRAS: customisable environmental sensor, code and results

description: This dataset documents the proposal and evaluation of SPaRAS: a Smart Packaging and Returns Assessment device developed throughout the course of James Gerrans's PhD as a technological solution to enable medicine reuse. This forms the supplementary information for a paper.

This dataset and work carried out during James Gerrans's PhD, including associated publications, is part of the ReMINDS project (http://www.reading.ac.uk/ReMINDS). ReMINDS is an innovative multidisciplinary research project at the University of Reading creating the science and technology behind medication reuse and environmental stewardship in pharmaceutical and clinical settings.

Included in this dataset is embedded software for STMicroelectronics STM32L4P5 CPU, developed from STMicroelectronics example code, to control the NFC and peripherals forming SPaRAS: the ReMINDS Customisable Environmental Sensor. This software is built on STM32CubeIDE 1.14.1. 

Also included is a program, developed in Eclipse IDE for C and C++ Developers - 2025-06 that processes information extracted from the device.

This dataset also contains the results from analysing this system in regards to: functionality, battery lifespan, memory consumption and efficiency of data extraction. Data from each stage of processing the results of these tests have been documented within this dataset. This includes: 

- Environmental data extracted from the board during an extended functionality test
- Current readings from the board used to determine the battery usage and lifespan of the SPaRAS
- Time measurements when extracting small amounts of data from the board which are extrapolated to approximate the time needed when reading all data from the device.

In each relevant file, captions have been added for clarity to explain the process used when analysing data.

Also included in this dataset is an Excel workbook containing the final results used to generate all figures and tables submitted within the associated publication.
DOI: 10.15468/dl.cfgrc2
title: Occurrence Download

description: A dataset containing 439 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Observation",
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Gentianella campestris",
 "Year 1970-2000"
 ]
}

 The dataset includes 439 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006933-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ej27aa
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-52.71735 -24.32869,-52.70899 -24.35734,-52.68147 -24.35107,-52.65199 -24.3457,-52.62545 -24.3363,-52.6112 -24.3354,-52.59597 -24.32734,-52.57386 -24.31257,-52.55076 -24.3054,-52.52324 -24.29824,-52.50309 -24.29824,-52.48983 -24.29107,-52.48835 -24.27942,-52.48393 -24.25971,-52.50075 -24.23219,-52.49763 -24.21832,-52.49139 -24.19911,-52.49958 -24.19555,-52.51518 -24.22614,-52.52883 -24.2233,-52.53624 -24.24179,-52.53312 -24.25637,-52.52883 -24.26206,-52.55028 -24.26419,-52.56716 -24.27064,-52.5773 -24.26993,-52.59407 -24.27882,-52.60806 -24.29133,-52.62756 -24.29979,-52.64118 -24.30656,-52.65325 -24.30966,-52.68111 -24.31643,-52.71735 -24.32869))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 51 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006932-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.452wvx
title: Occurrence Download

description: A dataset containing 2353 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Fusarium proliferatum",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2026"
 ]
}

 The dataset includes 2353 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006934-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ysw4j
title: Occurrence Download

description: A dataset containing 8127 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Digitalis obscura"
 ]
}

 The dataset includes 8127 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006936-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3p4efg
title: Occurrence Download

description: A dataset containing 5202 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mesoplodon bidens"
 ]
}

 The dataset includes 5202 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006937-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18456790
title: WP2.5 Geochemical Batch Experiments Supporting Data Spain & Portugal

description: Measured fluid compositions from geochemical batch experiments for samples from Spain & Portugal, described in PilotSTRATEGY D2.9, "Report of geochemical results for 3 areas".
DOI: 10.5281/zenodo.18456789
title: WP2.5 Geochemical Batch Experiments Supporting Data Spain & Portugal

description: Measured fluid compositions from geochemical batch experiments for samples from Spain & Portugal, described in PilotSTRATEGY D2.9, "Report of geochemical results for 3 areas".
DOI: 10.21954/ou.rd.31230229
title: Supplementary materials for PhD thesis "Past Environmental Change On The Eastern Andean Flank, Ecuador"

description: <i>This dataset comprises the files contained on a CD-ROM which was attached to the thesis when it was submitted in 2015. It was uploaded to ORDO in 2026 for preservation purposes. The thesis can be accessed via ORO:</i> <i>Past Environmental Change On The Eastern Andean Flank, Ecuador</i>Thesis abstractThe eastern Andean flank of Ecuador (EAF) contains some of the world’s most biodiverse ecosystems. Andean montane forests are threatened due to anthropogenic pressures and both current and projected climate change. This thesis examines the palaeoecological history of two stratigraphic sequences (Mera Tigre West [MTW] and Mera Tigre East [MTE]) obtained from the Ecuadorian modern lower montane forest. The sediments preserved were analysed using eight analytical techniques, allowing an insight into the ecosystem’s potential response to projected changes derived from their past responses. Palaeoecological studies on the EAF are rare, and those that do exist are debated relating to: i) the inference of robust ecological data from pollen records in floristically diverse locations, and ii) the past source area of sediments preserved in fluvially exposed sequences, potentially leading to contamination with older material.<br><br>A statistical sub-sampling tool was developed (debate i), capable of producing statistically robust count sizes for each pollen sample; MTW and MTE count sizes ranged from 196-982 showing the diversity within sequences. The depositional environment of MTE was analysed, investigating sediment provenance throughout (debate ii). Results found that large scale volcanic events were critical in the preservation of the sediments, whereas fluvial influence caused a regional sediment source area in the upper stratigraphy, impacting on the palynological interpretation of MTE. Pollen records demonstrated the presence of a diverse vegetation community with no modern analogue at MTE (abundant taxa (&gt;15 %): <i>Hedyosmum, Wettinia, Ilex</i>) and upper montane forest at MTW (<i>Alnus, Hedyosmum, Podocarpus</i>). Fire was not the main driver for the vegetation reassortment at either site (MTW correlation coefficient: -0.37, MTE: 0.16). The two sites have demonstrated the EAF plays host to floristically dynamic ecosystems, susceptible to drivers of change (fire and landscape) and should be considered when predicting the montane forests’ future response to environmental change.
DOI: 10.21954/ou.rd.31230229.v1
title: Supplementary materials for PhD thesis "Past Environmental Change On The Eastern Andean Flank, Ecuador"

description: <i>This dataset comprises the files contained on a CD-ROM which was attached to the thesis when it was submitted in 2015. It was uploaded to ORDO in 2026 for preservation purposes. The thesis can be accessed via ORO:</i> <i>Past Environmental Change On The Eastern Andean Flank, Ecuador</i>Thesis abstractThe eastern Andean flank of Ecuador (EAF) contains some of the world’s most biodiverse ecosystems. Andean montane forests are threatened due to anthropogenic pressures and both current and projected climate change. This thesis examines the palaeoecological history of two stratigraphic sequences (Mera Tigre West [MTW] and Mera Tigre East [MTE]) obtained from the Ecuadorian modern lower montane forest. The sediments preserved were analysed using eight analytical techniques, allowing an insight into the ecosystem’s potential response to projected changes derived from their past responses. Palaeoecological studies on the EAF are rare, and those that do exist are debated relating to: i) the inference of robust ecological data from pollen records in floristically diverse locations, and ii) the past source area of sediments preserved in fluvially exposed sequences, potentially leading to contamination with older material.<br><br>A statistical sub-sampling tool was developed (debate i), capable of producing statistically robust count sizes for each pollen sample; MTW and MTE count sizes ranged from 196-982 showing the diversity within sequences. The depositional environment of MTE was analysed, investigating sediment provenance throughout (debate ii). Results found that large scale volcanic events were critical in the preservation of the sediments, whereas fluvial influence caused a regional sediment source area in the upper stratigraphy, impacting on the palynological interpretation of MTE. Pollen records demonstrated the presence of a diverse vegetation community with no modern analogue at MTE (abundant taxa (&gt;15 %): <i>Hedyosmum, Wettinia, Ilex</i>) and upper montane forest at MTW (<i>Alnus, Hedyosmum, Podocarpus</i>). Fire was not the main driver for the vegetation reassortment at either site (MTW correlation coefficient: -0.37, MTE: 0.16). The two sites have demonstrated the EAF plays host to floristically dynamic ecosystems, susceptible to drivers of change (fire and landscape) and should be considered when predicting the montane forests’ future response to environmental change.
DOI: 10.15468/dl.knpgac
title: Occurrence Download

description: A dataset containing 4402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vipera ursinii)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 4402 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006939-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57903/uj/ywlhso
title: DigiFREN - research data

description: The DigiFREN project undertakes a comparative study of the digital aestheticisation of changing sensitive environments in Europe. The historical and ethnographic research conducted within the project aims to elucidate the ways in which digital media and technologies are transforming human-environment relations in their sensory, affective, discursive and practical manifestations and dimensions. Digital aestheticization, as a multifaceted and negotiated process, remains in a dialectical tension between the concrete experience of the environment and surroundings and more universal views and perceptions of them. 
As part of the project, each of the research teams has selected sites that reflect the cultural, social and environmental diversity of Europe. In the case of Poland, the Oder Valley in Lower Silesia; Slovenia, the alpine valleys of Solčavsko and Bohinj; Croatia, the Adriatic coast of Telašćica and Paklenica; Finland, the Finnish peat bogs of Sodankylä and Lieksa; and Norway, the Sørmarka urban forest in Stavanger. We are interested in the similarities and connections, but also in the contrasting processes and phenomena within which digital aesthetics articulate themselves in relation to the specified sites and their surroundings.
DOI: 10.35079/hbm632.znbw.622
title: RNAseq data from the ovary (left) of a 30-year-old white female
DOI: 10.15159/phytop.176
title: Karksi

description: Phytoplankton biomass, diversity and abundance in samples collected from Lake Karksi during the period 1974, 1976 and 1991.
DOI: 10.15468/dl.emr6au
title: Occurrence Download

description: A dataset containing 2563 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Paulownia tomentosa"
 ]
}

 The dataset includes 2563 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006940-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17154083
title: Supplementary data to 'Development and characterization of pNarsenic: a naringenin-inducible biosensor for arsenic in Escherichia coli'

description: This record contains supplementary data supporting the results described in 'Development and characterization of pNarsenic: a naringenin-inducible biosensor for arsenic in Escherichia coli' by Crabbe et al. (2026)



whole-plasmid-sequencing_results.zip contains the results obtained from whole-plasmid sequencing.

0mgL_Nar.zip contains the raw and processed data, metadata, and R scripts for the reporter gene assay supplemented with 0 mg/L naringenin.

3mgL_Nar.zip contains the raw and processed data, metadata, and R scripts for the reporter gene assay supplemented with 3 mg/L naringenin.

6-5mgL_Nar.zip contains the raw and processed data, metadata, and R scripts for the reporter gene assay supplemented with 6.5 mg/L naringenin.

10mgL_Nar.zip contains the raw and processed data, metadata, and R scripts for the reporter gene assay supplemented with 10 mg/L naringenin.

25mgL_Nar.zip contains the raw and processed data, metadata, and R scripts for the reporter gene assay supplemented with 25 mg/L naringenin.

Python_scripts_and_outputs.zip contains the Python script used to fit the data, run simulations, perform symbolic computations, and make plots, as well as several additional results not shown in the publication.