cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7110425.v1
title: Diel patterns of microphytobenthic primary production in intertidal sediments: the role of photoperiod on the vertical migration circadian rhythm

description: Diel primary production patterns of intertidal microphytobenthos (MPB) have been attributed to short-term physiological changes in the photosynthetic apparatus or to diel changes in the photoautrophic biomass in the sediment photic layer due to vertical migration. Diel changes in primary production and vertical migration are entrained by external factors like photoperiod and tides. However, the role of photoperiod and tides has not been experimentally separated to date. Here, we performed laboratory experiments with sediment cores kept in immersion, in the absence of tides, with photoperiod or under continuous light. Measurements of net production, made with O<sub>2</sub> microsensors, and of spectral reflectance at the sediment surface showed that, in intertidal sediments, the photoperiod signal can control diel patterns of net primary production and sediment oxygen availability through the vertical migration of the MPB photoautotrophic biomass. This vertical migration is controlled by an endogenous circadian rhythm exclusively entrained by photoperiod in the absence of tides, which in turn determines the diel oscillation in primary production. Fourier spectral analysis of temporal<sub> </sub>patterns confirmed that the photosynthetic circadian rhythm was mainly characterized by light/dark migratory cycles without any relevant contribution of the subjective <i>in situ </i>tidal period.
DOI: 10.6084/m9.figshare.20088356.v1
title: vContact2 files

description: Input and output files of vContact2 analyses for genome comparison and taxonomic studies.
DOI: 10.6084/m9.figshare.28942565.v1
title: miRNA sequencing.xlsx

description: miRNA 和 mRNA 测序的来源数据。
DOI: 10.6084/m9.figshare.21780128.v3
title: Original data and analysis code

description: Original data
DOI: 10.6084/m9.figshare.29008301.v1
title: 第四组（新）

description: data
DOI: 10.6084/m9.figshare.5125906.v1
title: Supplementary Material for: Spektrum der störungsspezifischen verhaltenstherapeutischen Behandlungsansätze bei depressiven Störungen

description: In der Diskussion um eine moderne Psychotherapie wird zunehmend eine „störungsspezifische Psychotherapie“ gefordert. Diesbezüglich gilt für die Verhaltenstherapie, dass es nicht nur für jede der vielen psychischen Störungen eigene Erklärungsmodelle und Interventionsmöglichkeiten gibt, sondern dass es auch für jede einzelne Störung gleich mehrere Alternativen gibt. Eine störungsspezifische Psychotherapie bedeutet nicht, dass sich aus der Diagnose alleine schon eine störungsspezifische Psychotherapie ableiten ließe, sondern es bedarf in jedem Einzelfall eines patientenspezifischen Störungsmodells und patientenspezifischer Interventionen. Heuristisch leitend müssen dabei die im Rahmen der Verhaltenstherapie über die Jahrzehnte entwickelten evidenzbasierten Störungskonzepte sein. Am Beispiel der depressiven Störung wird eine Übersicht über wichtige unterschiedliche Störungskonzepte und die daraus abgeleiteten Behandlungsmethoden gegeben, d.h. Reinforcer-Modelle, Coping-Modelle, kognitive Modelle, Emotionsmodelle und integrative verhaltenstherapeutische Modelle. Es wird dargestellt, wie diese Theorie- und Behandlungskonzepte auf den einzelnen Fall mittels Verhaltensanalyse zu übertragen sind.
DOI: 10.6084/m9.figshare.c.3836878_d2.v1
title: Additional file 2 of Ontological interpretation of biomedical database content

description: IND representation example. (OWL 37.3 kb)
DOI: 10.17632/jv9rftdmst
title: RPA Survey data from Carnation Creek - Carina Helm MSc Research.

description: This repository contains the data used for analysis in the manuscript "Rapid and objective characterization of channel morphology in a small, forested stream" submitted to Earth Surface Dynamics by Helm et al., (2020). It contains the raw spatial data used to conduct the analysis (raster files of bed elevation, grain size and bathymetry) as well as extracted channel variables for the PCA, and the results of a clustering analysis on channel form. A sample of a dense point cloud generated from the RPA data is also included.
DOI: 10.17632/mzzptc85hh
title: Data for: Metabolomic data of phenolic compounds from Acer negundo extracts

description: Phytochemical and metabolomic data were obtained for the most important phenolic compounds in ethanolic extracts from the endangered Acer negundo tree in Morelia, Michoacan. Samples of leaves and stems were subjected to ethanolic extraction with electric rotavapor. We developed a metabolomic analysis that encompassed the correlation between the leaf and stem extracts through principal component analysis. The data were obtained with an infinity Agilent ultrahigh resolution liquid chromatograph coupled to a Agilent triple quadrupole mass spectrometer. The protocol used was a dynamic MRM (Multiple Reaction Monitoring). Clustering result shown as heatmap (distance measure using euclidean, and clustering algorithm using ward.D).
DOI: 10.6084/m9.figshare.12547391.v1
title: Sensitive fluorescence detection of SARS-CoV-2 RNA in clinical samples via one-pot isothermal ligation and transcription

description: Figures associated with "Sensitive fluorescence detection of SARS-CoV-2 RNA in clinical samples via one-pot isothermal ligation and transcription"
DOI: 10.6084/m9.figshare.21688259.v1
title: Reactiontime_dataset_for_share

description: This is the dataset in the excel format of a cross-sectional study that included 64 graduate students who used a smartphone from the University of Phayao. They were randomly selected from strata based on city, age, and gender. Adolescents aged 18 to 22 were eligible for this study if they could converse adequately and had used smartphones for social media every day for at least a year before participation
DOI: 10.6084/m9.figshare.26207534.v1
title: Detailed description of the methodology

description: Detailed description of the methodology
DOI: 10.6084/m9.figshare.26311759.v1
title: Wilson et al Supplemental Table 1

description: Supplemental Table 1 for "Elongation factor 1A1 inhibition elicits changes in lipid droplet size, the bulk transcriptome, and cell type-associated gene expression in MASLD mouse liver"
DOI: 10.6084/m9.figshare.28882958.v2
title: Ahmet Survey Results-2.xlsx

description: This is the data set for my PhD degree.
DOI: 10.6084/m9.figshare.3565020.v1
title: Appendix E. Results of the encounters between neighboring corals at the Protected S. Crest, 1963–1989.

description: Results of the encounters between neighboring corals at the Protected S. Crest, 1963–1989.
DOI: 10.6084/m9.figshare.5882635.v1
title: Code from: The interplay between movement, morphology and dispersal in Tetrahymena ciliates

description: This fileset contains R scripts to reproduce the analyses and figures from the manuscript.
DOI: 10.6084/m9.figshare.25111706.v1
title: Supplementary Material for: An International Survey of Practices in the Investigation and Endoscopic Treatment of Peripheral Pulmonary Lesions amongst Interventional Bronchoscopists

description: Introduction: The investigation of peripheral pulmonary lesions (PPL) can be challenging. Several bronchoscopic modalities have been developed to reach and biopsy PPL but the level of adoption of these techniques by interventional pulmonologists (IP) is unknown. This international survey was conducted to describe current practices in PPL investigation among IP. 
Methods: This survey was sent to all members of the WABIP, CTS-PA, AABIP and the GETIF. The survey was composed of 48 questions and three clinical cases to establish a portrait of modalities used to investigate and treat PPL by IP around the world.
Results: Three hundred and twelve IP responded to the survey. Most of them practice in Europe (n = 122), North America (n = 97) and Asia (n=49). Half of responders perform more than 100 endoscopic procedures for PPL annually. General anesthesia and conscious sedation are used in similar proportions (53% and 47% respectively). Rapid On site Examination (ROSE) is used when sampling PPL by 42%. Radial EBUS (69%), fluoroscopy (55%) and electromagnetic navigation (27%) are the most widely used techniques. Most IP combine techniques (89%). Robotic bronchoscopy (15%) and cone beam CT (8%) are almost exclusively used in the United States of America where, respectively, 60% and 37% of respondents reported using these modalities. Ten percent of IP currently had access to endoscopic treatment modalities for PPL. However, half of the remaining IP plan to acquire an endoscopic treatment modality in the next 2 years.
Conclusion: Available techniques and practices worldwide vary significantly regarding PPL investigation and treatment.
DOI: 10.6084/m9.figshare.3395338.v1
title: Schwacha - Dermal gd T-cell cytokines and FACs.xlsx

description: Dataset for Plos One submission: Dermal γδ T-Cells Can Be Activated by Mitochondrial Damage-Associated Molecular Patterns<br>
DOI: 10.6084/m9.figshare.5756319.v1
title: Supplementary Material for: Associations of Fibroblast Growth Factor 23 with Markers of Inflammation and Leukocyte Transmigration in Chronic Kidney Disease

description: <b><i>Background:</i></b> Patients with chronic kidney disease (CKD) show elevated levels of inflammatory markers and have an increased risk of infections as well as cardiovascular morbidity. Recent studies have implied effects of fibroblast growth factor 23 (FGF23) on inflammation in CKD. We analyzed potential correlations between levels of FGF23 with pro-inflammatory chemokines and markers of leukocyte transmigration in CKD patients. <b><i>Methods:</i></b> One hundred three patients with CKD 2–5ND and 54 healthy controls, had biochemical markers in blood and urine analyzed according to routine protocol. Pro-inflammatory cytokines were analyzed by Milliplex technique and leukocyte CD11b adhesion molecule expression was measured by flow cytometry. FGF23 levels were measured with ELISA technique. Treatment of leukocytes from healthy blood donors with FGF23 was performed in vitro and effects analyzed by flow cytometry. <b><i>Results:</i></b> Tumor necrosis factor-alpha, RANTES and interleukin (IL)-12 levels were significantly higher (<i>p</i> = 0.001, <i>p</i> &lt; 0.001, and <i>p</i> &lt; 0.001) in patients with CKD. Elevated FGF23 levels in the CKD group correlated to glomerular filtration rate, parathyroid hormone, urinary albumin excretion and phosphate as well as to IL-12 and RANTES. CD11b expression on resting granulocytes and monocytes, and on activated monocytes, was associated with FGF23<i>.</i> In vitro treatment of leukocytes with FGF23 reduced CD11b expression in resting as well as in formyl-methyinoyl-leucyl-phenylalanine-stimulated granulocytes (<i>p</i> = 0.03). <b><i>Conclusion:</i></b><i></i> FGF23 levels are associated with various inflammatory markers such as pro-inflammatory cytokines and adhesion molecules on innate immune cells. However, further studies are warranted to define the direct role of FGF23 in modulation of the innate immune system in CKD.
DOI: 10.17632/bdjj248zwn
title: Data for: Escape from the Usual: development and implementation of an ‘escape room’ activity to assess team dynamics

description: This data shows that utilizing strengths within a team improves team dynamics.
DOI: 10.6084/m9.figshare.19224786.v1
title: Simulated Data for Patient Time Series Record Linkage

description: This simulated dataset constitutes two files (after decompression), namely: <b>sim_ergo_1600.<code>csv</code></b> and <b>sim_pat_1600</b><code><b>.csv</b>.</code><code><br></code><code>1. <code><b>ergo.csv</b></code> contains heart rate timeseries data for 1600 patients' ergometric tests. For each patient, 20 different ergometric tests were simulated. Each row in this file constitutes three field values: <code><i>Ergo_ID</i></code>, <i>Heart Rate</i> (BPM), and <code><i>timestamp</i></code>.<br><code><br></code></code><code><code>2. <b>pat.csv</b></code> contains only four sample readings from each of the patient's 20 ergometric tests. Each row contains three values: <i>patient_ID</i>, <i>Heart Rate</i>, and <i>timestamp</i>. <br></code><br>The goal is to link patients (identified by their patient_ID in the <code><b>pat.csv</b></code> file) to their corresponding ergometric tests (identified by their <i>Ergo_ID</i> in the <code><b>ergo.csv</b></code> file). This is done solely on matching the timestamp-value pairs from both files.<br><br>The timeseries record linkage task described above is efficiently accomplished by the proposed <b>tslink2</b> algorithm. <b>tslink2</b> is implemented in <i>C++</i> and is publicly availabe at <i>https://github.com/ahmsoliman/tslink2</i><i><br></i>Data is simulated such that correctly linked/matched identifiers follow the following formula:<i><br></i><i>|</i><i>Ergo_ID - </i><i>patient_ID|</i><i> mod 10<sup>4</sup> == 0</i><br><i><br></i>The above formula is useful in evaluating the linkage algorithm performance.
DOI: 10.17632/n77g32sb42
title: Dataset for hybrid analysis on cloud computing adoption at organizational level 

description: This article includes analytical results an raw data for our research. Using the technology acceptance model (TAM) and dependability theory, this study seeks the predictors of organizational-level adoption of cloud computing (CC) by combining structural equation modeling (SEM) and an artificial neural network (ANN) to analyze data collected by an online survey in South Korea. The dataset consists of two hundred thirty valid responses of managers in various organizations using cloud computing. The dataset has seven variables such as perceived usefulness, perceived ease of use, behavioral intention, availability, reliability, security and maintainability.
DOI: 10.5522/04/12689870.v1
title: MS3972h B Sloane Manuscript XML

description: A digital edition of Sloane MS 3972B of folios listing manuscript material removed from 3972C. This resource has been designed for free consultation in association with the Sloane Consortium of UK national institutions which hold the original manuscript catalogue documents and related collections of Sir Hans Sloane. All content is reproducible as long as the source is indicated by referencing the publication and the name of the institutional owner of the original catalogue manuscript -- in this case The British Library. An article outlining the research considerations and decision making processes guiding the<br>marking up of the Sloane collection catalogues in the framework of the Enlightenment Architectures project can be found at Ortolja-Baird, A., Pickering, V., Nyhan, J., Sloan, K. and Fleming, M., 2019. ‘Digital Humanities in the Memory Institution: The Challenges of Encoding Sir Hans Sloane’s Early Modern Catalogues of His Collections.’ Open Library of Humanities, 5(1), p.44. DOI: http://doi.org/10.16995/olh.409 The raw transcriptions from digital images of the original manuscripts were commissioned by the Enlightenment Architectures project from the AEL Data company. These transcriptions were then fully compared, checked and corrected against the original documents by the research team that is also responsible for the complete TEI markup of the transcriptions<br>
DOI: 10.17632/frz7yh5ctr
title: FLOT chemotherapy treatment affects adipocyte’s lipid metabolism: an in vitro study

description: This data was used to produce the following paper, Guerrier et al., FLOT chemotherapy treatment affects adipocyte’s lipid metabolism: an in vitro study submitted in Adipocyte Journal.
DOI: 10.17632/kjrsb7ztr9
title: Banana Bunch Harvesting Dataset

description: Dataset overview: The automatic harvesting of the banana bunch, which is crucial in the agricultural sector, can be done using the dataset for banana bunch harvesting. This dataset includes images of the banana bunch collected from the four different fields: Ponta do Sol, Santo António, and Câmara de Lobos, Ponta do Sol and Lugar de Baixo by using three different smartphones (Samsung Galaxy A12, Samsung Galaxy Note 9, and OnePlus 9). The dataset includes 2,685 photos of banana bunches in various environmental settings for harvesting. 

Dataset collection process: In Madeira Island, Portugal, a team of harvesting experts has divided these banana bunches into two classes: "Cut (ready to harvest)" and "Not Cut (not ready to harvest)". The field was visited 29 times for the purpose of gathering banana bunches; "Cut" data was gathered in conjunction with a harvesting specialist, and the remaining "Keep" data was gathered by the researcher later that day.

Data usage: The dataset for banana bunches is useful for researchers, scientists, and various agricultural companies when making judgments about harvesting. As far as the research team's knowledge goes, this is the sole dataset that can be used to study the harvesting of banana bunches.
DOI: 10.6084/m9.figshare.28952606.v8
title: Logic innovation NEW

description: Logic innovation
DOI: 10.6084/m9.figshare.16923289.v1
title: Prediction of upcoming speech under fluent and disfluent conditions: eye tracking evidence from immersive virtual reality

description: Traditional experiments indicate that prediction is important for efficient speech processing. In three virtual reality visual world paradigm experiments, we tested whether such findings hold in naturalistic settings (Experiment 1) and provided novel insights into whether disfluencies in speech (repairs/hesitations) inform one’s predictions in rich environments (Experiments 2–3). Experiment 1 supports that listeners predict upcoming speech in naturalistic environments, with higher proportions of anticipatory target fixations in predictable compared to unpredictable trials. In Experiments 2–3, disfluencies reduced anticipatory fixations towards predicted referents, compared to <i>conjunction</i> (Experiment 2) and <i>fluent</i> (Experiment 3) sentences. Unexpectedly, Experiment 2 provided no evidence that participants made new predictions from a repaired verb. Experiment 3 provided novel findings that fixations towards the speaker increase upon hearing a <i>hesitation</i>, supporting current theories of how hesitations influence sentence processing. Together, these findings unpack listeners’ use of visual (objects/speaker) and auditory (speech/disfluencies) information when predicting upcoming words.
DOI: 10.17632/fm2zyv224s
title: Positive priming effects driven by methanogenesis rather than carbon dioxide production in anoxic sediments of saline lakes

description: CO2 and CH4 production rates and their associlated isotope ratios of C13/C12; The sediment properties of the sampled saline lakes
DOI: 10.17632/wj8j6drf6r
title: Sexual Orientation, Gender Identity and Psychological Gender Profile in Women athletes

description: Two questionnaires were applied to evaluate the intended variables. The first instrument evaluated the sociodemographic profile (age, marital status, sexual orientation - Kinsey scale, modality practiced, training time, hours of training, intensity). The second instrument applied was the Female Inventory of the Self-Concept Gender Schema (IFEGA), used to classify the athletes according to gender typological profile.
DOI: 10.6084/m9.figshare.24602949.v1
title: RG Meta-Analysis of CPSS-5

description: Meta-analysis data for CPSS-5.
DOI: 10.6084/m9.figshare.27060895.v1
title: Dissecting the contribution of common variants to risk of rare neurodevelopmental conditions

description: Supplementary Data 1: Summary statistics from the GWAS of neurodevelopmental conditions comparing cases to controls within the Genomics England (GEL) 100,000 Genomes Project.

Supplementary Data 2: Summary statistics from the GWAS of neurodevelopmental conditions comparing DDD cases to UKHLS controls, excluding the Scottish samples from DDD.

Supplementary Data 3: Summary statistics from the GWAS meta-analysis of neurodevelopmental conditions combining the DDD and GEL GWASs.
DOI: 10.6084/m9.figshare.13190570.v5
title: Mzxml files for the mass spectra in Figure 4

description: N-glycans from the Tregs were permethylated and analysed by MALDI-TOF mass spectrometry. The data were acquired in the form of [M+Na]+ ions. Peaks representing hybrid and complex glycans were annotated according to the molecular weight and N-glycan biosynthetic pathways. <br>Underlying data for the manuscript 'Activation of regulatory T cells triggers specific changes in glycosylation associated with Siglec-1-dependent inflammatory responses'. <br>
DOI: 10.6084/m9.figshare.3526265.v1
title: Appendix C. Behavior of convex hull volume in a null model with respect to species richness and the dimensionality of trait space considered.

description: Behavior of convex hull volume in a null model with respect to species richness and the dimensionality of trait space considered.
DOI: 10.6084/m9.figshare.7707167.v1
title: Fileset of twenty IDF low-income reference dwellings in Fortaleza, Brazil

description: This fileset comprises twenty IDF files of low-income houses in Fortaleza, Brazil. Files can be run using EnergyPlus version 9.0.1 with the weather data from Fortaleza, Brazil.<br><br>
DOI: 10.6084/m9.figshare.21185992.v1
title: Modified test distribution systems

description: Supplementary materials for paper " Optimal Coordinated Operation for a Distribution Network with Virtual Power Plants Considering Load Shaping"
DOI: 10.6084/m9.figshare.28726475.v1
title: Cross-et-al-2025-NG_CodeS1_slabModel.zip

description: Code for producing the slab model presented in Cross et al. (2025, Nature Geoscience)
DOI: 10.15468/dl.zck5z2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia innesi (Fowler, 1934)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((6.1346 -1.4131,6.0095 -1.0885,5.5445 -0.9058,5.2269 -1.0828,5.1089 -1.4368,5.2587 -1.812,5.5948 -1.957,6.0445 -1.7393,6.1346 -1.4131))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013379-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.28120874.v4
title: China's City Level Expressions of Public Views Indices on Climate Risk and Government Responses

description: A dataset on China's climate risk public opinion and government response indices in city Level, 2011-2023 (excluding data from Hong Kong, Macao, and Taiwan).