cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18694720
title: Data and R code for: Human disturbance and sex-biased management drive low-light activity in fallow deer

description: This repository contains all data and R scripts supporting the manuscript:

de Lange, A., Geelen, L.H.W.T., & Kissling, W.D. (2026). Human disturbance and sex-biased management drive low-light activity in fallow deer. European Journal of Wildlife Research.

The repository provides full reproducibility of analyses examining seasonal and sex-specific diel activity patterns of European fallow deer (Dama dama) in the Amsterdamse Waterleidingduinen (the Netherlands).

Contents include:





Raw camera-trap observation exports and associated metadata for three focal sampling periods (rut, post-rut, and birthing).




Processed and cleaned fallow deer detection datasets, including sequencing procedures and sensitivity analyses assessing the effect of time-to-independence filtering.




R scripts for data extraction, cleaning, diel niche modelling (selection framework), kernel density estimation, and temporal overlap analysis.




Derived analytical outputs, including Diel.Niche triplots, posterior probability tables, overlap estimates, and kernel density visualisations used in the manuscript.



The repository is organised into three main directories:





1_Raw_Data – Original camera-trap export (CSV) and API extraction code (Rmd) from the UvA sensor portal.




2_Processed_Data – Cleaned datasets, processing scripts, and sensitivity analyses.




3_Derived_Data – Final outputs, figures, and summary tables reported in the manuscript.



Together, these materials allow complete reproducibility of the study, from raw camera-trap records to final figures and statistical results.
DOI: 10.5281/zenodo.18695108
title: Linked collectors and determiners for: University of Louisiana at Monroe Herbarium, R. Dale Thomas Collection.

description: Natural history specimen data linked to collectors and determiners held within, "University of Louisiana at Monroe Herbarium, R. Dale Thomas Collection". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/bb0366a9-2a7e-44f8-9c9a-e49c23dae2f8 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/bb0366a9-2a7e-44f8-9c9a-e49c23dae2f8. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.18695109
title: Linked collectors and determiners for: Combining target enrichment and Sanger sequencing data to clarify the systematics of the diverse Neotropical butterfly subtribe Euptychiina (Nymphalidae, Satyrinae).

description: Natural history specimen data linked to collectors and determiners held within, "Combining target enrichment and Sanger sequencing data to clarify the systematics of the diverse Neotropical butterfly subtribe Euptychiina (Nymphalidae, Satyrinae)". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/bfb878f3-8a74-46d3-a104-36485c32aaba using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/bfb878f3-8a74-46d3-a104-36485c32aaba. Formatted as a Frictionless Data package.
DOI: 10.25549/rbm-c58-21669
title: Nude man throwing a disk, ascending a step, walking

description: Nude man throwing a disk. This is plate 519 captioned "A: Throwing a disk. B: Ascending a step. C: walking" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.5281/zenodo.10510241
title: Linked collectors and determiners for: Combining target enrichment and Sanger sequencing data to clarify the systematics of the diverse Neotropical butterfly subtribe Euptychiina (Nymphalidae, Satyrinae).

description: Natural history specimen data linked to collectors and determiners held within, "Combining target enrichment and Sanger sequencing data to clarify the systematics of the diverse Neotropical butterfly subtribe Euptychiina (Nymphalidae, Satyrinae)". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/bfb878f3-8a74-46d3-a104-36485c32aaba using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/bfb878f3-8a74-46d3-a104-36485c32aaba. Formatted as a Frictionless Data package.
DOI: 10.15468/dl.8z98nn
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.29_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhodiola sacra"
 ]
}

 The dataset includes 82 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029111-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/rbm-c58-21677
title: Nude men wrestling, sparring without gloves

description: Nude men wrestling. This is plate 520 captioned "A-C: Wrestling. D: Sparring without gloves" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.15468/dl.453st7
title: Occurrence Download

description: A dataset containing 1 records in GBIF matching the query:
SELECT
 classificationdetails['d7dddbf4-2cf0-4f39-9b2a-bb099caae36c']
FROM
 occurrence
WHERE
 occurrence.gbifid = '1320285454'

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029090-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/rbm-c58-21758
title: Nude man jumping, handspring, somersault, springing over a man's back

description: Nude man jumping. This is plate 522 captioned "A: Jumping. B: Handspring. C, D: Somersault. E: Springing over a man's back" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.25549/rbm-c58-21759
title: Nude man jumping, handspring, somersault, springing over a man's back

description: Nude man jumping. This is plate 522 captioned "A: Jumping. B: Handspring. C, D: Somersault. E: Springing over a man's back" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.5281/zenodo.18695110
title: Linked collectors and determiners for: Coleção Científica de Mastozoologia da UFPR.

description: Natural history specimen data linked to collectors and determiners held within, "Coleção Científica de Mastozoologia da UFPR". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/c367f3bb-7db1-4cbb-962a-a13615c9b624 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/c367f3bb-7db1-4cbb-962a-a13615c9b624. Formatted as a Frictionless Data package.
DOI: 10.25549/rbm-c58-21766
title: Nude man jumping, handspring, somersault, springing over a man's back

description: Nude man jumping. This is plate 522 captioned "A: Jumping. B: Handspring. C, D: Somersault. E: Springing over a man's back" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.5281/zenodo.10510243
title: Linked collectors and determiners for: Coleção Científica de Mastozoologia da UFPR.

description: Natural history specimen data linked to collectors and determiners held within, "Coleção Científica de Mastozoologia da UFPR". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/c367f3bb-7db1-4cbb-962a-a13615c9b624 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/c367f3bb-7db1-4cbb-962a-a13615c9b624. Formatted as a Frictionless Data package.
DOI: 10.25549/rbm-c58-21768
title: Nude man jumping, handspring, somersault, springing over a man's back

description: Nude man jumping. This is plate 522 captioned "A: Jumping. B: Handspring. C, D: Somersault. E: Springing over a man's back" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.5281/zenodo.18694888
title: RodríguezAetal.2009Plant&Soil322_database

description: Database of the research study "Rodríguez A, et al. (2009). Spatial variability of soil properties under Pinus canariensis canopy in two contrasting soil textures. Plant & Soil 322(1-2):139-150"
DOI: 10.5281/zenodo.18694889
title: RodríguezAetal.2009Plant&Soil322_database

description: Database of the research study "Rodríguez A, et al. (2009). Spatial variability of soil properties under Pinus canariensis canopy in two contrasting soil textures. Plant & Soil 322(1-2):139-150"
DOI: 10.5281/zenodo.18695111
title: Linked collectors and determiners for: University of Wisconsin - Eau Claire Herbarium.

description: Natural history specimen data linked to collectors and determiners held within, "University of Wisconsin - Eau Claire Herbarium". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/c924811b-a307-420b-974e-a5f2f24a8b99 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/c924811b-a307-420b-974e-a5f2f24a8b99. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510245
title: Linked collectors and determiners for: University of Wisconsin - Eau Claire Herbarium.

description: Natural history specimen data linked to collectors and determiners held within, "University of Wisconsin - Eau Claire Herbarium". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/c924811b-a307-420b-974e-a5f2f24a8b99 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/c924811b-a307-420b-974e-a5f2f24a8b99. Formatted as a Frictionless Data package.
DOI: 10.25549/rbm-c58-21775
title: Nude man jumping, handspring, somersault, springing over a man's back

description: Nude man jumping. This is plate 522 captioned "A: Jumping. B: Handspring. C, D: Somersault. E: Springing over a man's back" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.25549/rbm-c58-21228
title: Nude man shoeing a horse

description: Nude man shoeing a horse. This is plate 509, captioned "Shoeing a horse" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.6084/m9.figshare.29874260
title: Data: Reduced seed dispersal potential in dandelions isolated within urban historical sites

description: <b>Abstract</b>Historical sites preserved within cities often serve as refuges for local biodiversity. However, these sites are surrounded by buildings and roads, creating sharp contrasts in habitat suitability between them and the surrounding urban matrix. Under such conditions, reduced dispersal potential may be favoured if remaining within the site enhances fitness. We tested this hypothesis in the self-incompatible dandelion, <i>Taraxacum platycarpum</i> (Asteraceae). We compared the morphological traits affecting seed-dispersal potential between populations inhabiting historical sites (castles and shrines) in a major metropolitan area and those inhabiting open sites in rural areas. Pappus volume, which is positively associated with dispersal potential, was significantly smaller in historical-site than in open-site populations. In contrast, achene volume, which is less directly related to dispersal potential, did not differ between site types. Moreover, populations in historical sites tended to exhibit a lower genetic diversity than those in open sites did. These results suggest that seed dispersal traits in dandelions have diminished in urban historical sites, potentially leading to reduced genetic diversity as an evolutionary consequence. Together, our findings illustrate how extreme habitat isolation within cities can shape dispersal evolution and emphasise the importance of incorporating evolutionary processes into the conservation of plant populations in these environments.<b>Note</b><b>place</b>: NC: Nagoya Castle, AS: Atsuta Shrine, OK: Okazaki, TY: Toyoake<b>Vp</b>: Volume of pappus (mm<sup>2</sup>)<b>Va</b>: Volume of achene (mm<sup>2</sup>)<b>sec</b>: Time of diaspore to contact ground (s)<b>Vtin</b>: inverse of terminal velocity
DOI: 10.6084/m9.figshare.29874260.v1
title: Data: Reduced seed dispersal potential in dandelions isolated within urban historical sites

description: <b>Abstract</b>Historical sites preserved within cities often serve as refuges for local biodiversity. However, these sites are surrounded by buildings and roads, creating sharp contrasts in habitat suitability between them and the surrounding urban matrix. Under such conditions, reduced dispersal potential may be favoured if remaining within the site enhances fitness. We tested this hypothesis in the self-incompatible dandelion, <i>Taraxacum platycarpum</i> (Asteraceae). We compared the morphological traits affecting seed-dispersal potential between populations inhabiting historical sites (castles and shrines) in a major metropolitan area and those inhabiting open sites in rural areas. Pappus volume, which is positively associated with dispersal potential, was significantly smaller in historical-site than in open-site populations. In contrast, achene volume, which is less directly related to dispersal potential, did not differ between site types. Moreover, populations in historical sites tended to exhibit a lower genetic diversity than those in open sites did. These results suggest that seed dispersal traits in dandelions have diminished in urban historical sites, potentially leading to reduced genetic diversity as an evolutionary consequence. Together, our findings illustrate how extreme habitat isolation within cities can shape dispersal evolution and emphasise the importance of incorporating evolutionary processes into the conservation of plant populations in these environments.<b>Note</b><b>place</b>: NC: Nagoya Castle, AS: Atsuta Shrine, OK: Okazaki, TY: Toyoake<b>Vp</b>: Volume of pappus (mm<sup>2</sup>)<b>Va</b>: Volume of achene (mm<sup>2</sup>)<b>sec</b>: Time of diaspore to contact ground (s)<b>Vtin</b>: inverse of terminal velocity
DOI: 10.25549/rbm-c58-21246
title: Nude man shoeing a horse

description: Nude man shoeing a horse. This is plate 509, captioned "Shoeing a horse" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.5281/zenodo.18695112
title: Linked collectors and determiners for: Review of Grotiusomyia Girault (Chalcidoidea: Eulophidae), an exclusively New World genus, including 17 new species.

description: Natural history specimen data linked to collectors and determiners held within, "Review of Grotiusomyia Girault (Chalcidoidea: Eulophidae), an exclusively New World genus, including 17 new species". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/cabaaf5e-455a-4c57-84ca-aed0c83106ec using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/cabaaf5e-455a-4c57-84ca-aed0c83106ec. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10597601
title: Linked collectors and determiners for: Review of Grotiusomyia Girault (Chalcidoidea: Eulophidae), an exclusively New World genus, including 17 new species.

description: Natural history specimen data linked to collectors and determiners held within, "Review of Grotiusomyia Girault (Chalcidoidea: Eulophidae), an exclusively New World genus, including 17 new species". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/cabaaf5e-455a-4c57-84ca-aed0c83106ec using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/cabaaf5e-455a-4c57-84ca-aed0c83106ec. Formatted as a Frictionless Data package.
DOI: 10.25549/rbm-c58-16242
title: Man in pelvis cloth performing contortions

description: Man in pelvis cloth performing contortions. This is plate 510, captioned "Contortions on the ground." from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.5281/zenodo.18695113
title: Linked collectors and determiners for: The Australambrysus plax (La Rivers, 1967) species complex (Heteroptera: Naucoridae), with descriptions of three new species.

description: Natural history specimen data linked to collectors and determiners held within, "The Australambrysus plax (La Rivers, 1967) species complex (Heteroptera: Naucoridae), with descriptions of three new species". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/cfbb52ed-2386-48ed-a227-a6da03b83539 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/cfbb52ed-2386-48ed-a227-a6da03b83539. Formatted as a Frictionless Data package.
DOI: 10.25549/rbm-c58-16253
title: Man in pelvis cloth performing contortions

description: Man in pelvis cloth performing contortions. This is plate 510, captioned "Contortions on the ground." from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.5281/zenodo.10510249
title: Linked collectors and determiners for: The Australambrysus plax (La Rivers, 1967) species complex (Heteroptera: Naucoridae), with descriptions of three new species.

description: Natural history specimen data linked to collectors and determiners held within, "The Australambrysus plax (La Rivers, 1967) species complex (Heteroptera: Naucoridae), with descriptions of three new species". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/cfbb52ed-2386-48ed-a227-a6da03b83539 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/cfbb52ed-2386-48ed-a227-a6da03b83539. Formatted as a Frictionless Data package.
DOI: 10.25549/rbm-c58-16257
title: Man in pelvis cloth performing contortions

description: Man in pelvis cloth performing contortions. This is plate 510, captioned "Contortions on the ground." from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.25549/rbm-c58-15445
title: Nude child crawling on stairs

description: Nude child crawling on stairs. This is plate 480, captioned "Child walking and crawling on stairs" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.25549/rbm-c58-15443
title: Nude child crawling on stairs

description: Nude child crawling on stairs. This is plate 480, captioned "Child walking and crawling on stairs" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.25549/rbm-c58-15501
title: Child lifting doll and walking

description: Child lifting doll and walking. This is plate 481, captioned "Child lifting doll, turning and walking off" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.5281/zenodo.10510251
title: Linked collectors and determiners for: USDA United States National Fungus Collections.

description: Natural history specimen data linked to collectors and determiners held within, "USDA United States National Fungus Collections". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/d1a3b128-b406-46bb-a6d1-f3591dcc8a7b using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/d1a3b128-b406-46bb-a6d1-f3591dcc8a7b. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.18695116
title: Linked collectors and determiners for: USDA United States National Fungus Collections.

description: Natural history specimen data linked to collectors and determiners held within, "USDA United States National Fungus Collections". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/d1a3b128-b406-46bb-a6d1-f3591dcc8a7b using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/d1a3b128-b406-46bb-a6d1-f3591dcc8a7b. Formatted as a Frictionless Data package.
DOI: 10.25549/rbm-c58-15496
title: Child lifting doll and walking

description: Child lifting doll and walking. This is plate 481, captioned "Child lifting doll, turning and walking off" from Eadweard Muybridge. Animal locomotion: an electro-photographic investigation of consecutive phases of animal movements. 1872-1885 / published under the auspices of the University of Pennsylvania. Plates. The plates printed by the Photo-Gravure Company. Philadelphia, 1887.
DOI: 10.5281/zenodo.10510253
title: Linked collectors and determiners for: Grand Valley State University.

description: Natural history specimen data linked to collectors and determiners held within, "Grand Valley State University". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/d3f96902-f86e-463d-9e38-1b35aaed5caf using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/d3f96902-f86e-463d-9e38-1b35aaed5caf. Formatted as a Frictionless Data package.