cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23719/1529959
title: Dose Response, Dosimetric, and Metabolic Evaluations of Replacement PFAS Perfluoro-(2,5,8-trimethyl-3,6,9-trioxadodecanoic) Acid (HFPO-TeA)

description: The supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/toxics11120951/s1. Text S1: Chemicals; Text S2: Thyroid Hormone Chemicals and Analysis; Text S3: In Vivo Statistics; Text S4: Plasma Dosimetry Chemicals, Materials, and Analysis; Text S5: Normalization of Dosimetry Data Calculations; Text S6: Liver Dosimetry Chemicals, Materials, and Analysis; Text S7: Liver-to-Plasma Partitioning Calculations; Text S8: Non-Targeted Analysis Method and Data Processing; Text S9: Hepatocyte Metabolic Stability Assay Materials, Chemicals, and Calculations; Text S10: Plasma Protein Binding Materials, Chemicals, Assay Design, and Calculations; Text S11: In Vitro–In Vivo Extrapolation (IVIVE) Calculations. Table S1: Data processing parameters used with Sciex OS 3.0; Table S2: Data processing parameters used with Sciex MarkerView 1.3.1; Table S3: Chemical identification, vendor, purity, and experiment usage for all analytes and internal standards; Table S4: Mobile phase gradient for targeted analysis of thyroid hormones in plasma on a Sciex 6500+ QTRAP. Both mobile phases contained 0.1% formic acid as an additive; Table S5: Various instrument conditions for plasma thyroid hormone quantitation on a Sciex 6500+ QTRAP; Table S6: Monitored transitions for analysis of thyroid hormones and 13C-labeled internal standards on a Sciex 6500+ QTRAP. All ions were acquired in positive ion mode; Table S7: Mobile phase gradient for targeted analysis of HFPO-TeA on a Sciex X500R QTOF/MS. Both mobile phases contained ammonium formate (4 mM) as an additive; Table S8: Various instrument conditions for sample analysis on a Sciex X500R QTOF/MS; Table S9: Monitored transitions for analysis of HFPO-TeA using PFHxDA as an internal standard on a Sciex X500R QTOF/MS. The ion of m/z 350.97 is the in-source fragment formed from the HFPO-TeA molecular ion of m/z 660.97. All ions were acquired in negative ion mode; Table S10: Mobile phase gradient for non-targeted analysis on a Sciex X500R QTOF/MS. Ammonium formate (4 mM) was present in both mobile phases as an additive; Table S11: Mobile phase gradient for targeted analysis of HFPO-TeA on a Waters Xevo-TQS. Both mobile phases contained the additive ammonium acetate (2.5 mM); Table S12: Various instrument conditions for hepatocyte clearance and protein plasma binding assays on a Waters Xevo-TQS; Table S13: Monitored transitions for analysis of the in vitro analytes using a Waters Xevo-TQS; Table S14: Individual body weights, absolute liver weights, and relative liver weights for all rats after 5 days of exposure; Table S15: Individual concentrations for plasma T3, rT3, and T4 in all rats after 5 days of exposure to HFPO-TeA. N/A = Calculation not completed due the majority of samples being below the LOQ; Table S16: Individual HFPO-TeA plasma and plasma extract concentrations for all rats after 2 h of exposure...
DOI: 10.23719/1530058
title: Towards a framework for invasive aquatic plant survey design in Great Lakes coastal areas

description: Supplementary files for "Tucker AJ, Annis G, Elgin E, Chadderton WL, Hoffman J. Towards a framework for invasive aquatic plant survey design in Great Lakes coastal areas. Manag Biol Invasion. 2022 Feb 4;13(1):45-67. doi: 10.3391/mbi.2022.13.1.03. PMID: 35664708; PMCID: PMC9157784."
DOI: 10.23719/1530476
title: Quantitative Fecal Source Characterization of Urban Municipal Storm Sewer System Outfall ‘Wet’ and ‘Dry’ Weather Discharges

description: Data for Figures 2-5
DOI: 10.23719/1518689
title: Secondary screening method for sodium-iodide symporter inhibition utilizing FRTL-5 cells data set

description: Data pertaining to a NIS-expressing cell line, FRTL-5 and it's screening capabilities for confirming inhibitors of NIS-mediated iodide uptake
DOI: 10.23719/1518745
title: Data for Tables and Figures - Marine Fisheries

description: The dataset provides the data used in each of the figures and tables in the final published manuscript specifically Figures 2-9 and Tables 10 and 11.
DOI: 10.23719/1518894
title: Figure 1: Association between cytokines assessed in EBC and the clinical outcomes of CPIS and CXRAY using a generalized estimating equations model

description: Association between cytokines assessed in EBC and the clinical outcomes of CPIS and CXRAY using a generalized estimating equations model. CPIS = clinical pulmonary infection score; CXRAY = chest radiograph score.
DOI: 10.23719/1518919
title: A Spatio-Temporal Modeling Approach to Forecasting High-Risk Freshwater Cyanobacterial Harmful Algal Blooms in Florida

description: Data support the publication "Spatio-Temporal Modeling For Forecasting High-Risk Freshwater Cyanobacterial Harmful Algal Blooms in Florida"
DOI: 10.23719/1519063
title: EMAP-Western Pilot Study Fish Sampling Effort

description: Fish count data collected from 300-channel width reaches of Western USA rivers as part of the EMAP-Western Pilot Study.
DOI: 10.23719/1519112
title: annual average model predicted concentrations without and with DMS chemistry

description: COMBINE_CONC_A0_2016_without_DMS_AVG.tar – annual average model predicted concentrations without DMS chemistry

COMBINE_CONC_A_2016_annual_AVG.tar – annual average model predicted concentrations with DMS chemistry

GRIDCRO2D.108NHEMI2.44L.20060101.tar - file containing latitude and longitude of model grid-cell

Model: The Community Multiscale Air Quality (CMAQv53) was used. It is available at https://www.epa.gov/cmaq
DOI: 10.23719/1519201
title: Dataset to support LEAF screening and scenario assessment for manuscripts to be published in the Hazardous Waste Materials Journal

description: The equations for the manuscripts are provided showing how LEAF data can be used in conducting either a screening or scenario assessment to calculate source terms to predict leaching of inorganic s
DOI: 10.23719/1520047
title: Placenta ScienceHub Data (version 1)

description: Data relative to the paper entitled " Ozone-induced fetal growth restriction in rats is associated with sexually dimorphic placental and fetal metabolic adaptation."
DOI: 10.23719/1520079
title: Data for figures in journal article entitled: Cookstove emissions and performance evaluation using a new ISO protocol and comparison of results with previous test protocols

description: This file includes data for figures in the journal article entitled: Cookstove emissions and performance evaluation using a new ISO protocol and comparison of results with previous test protocols.  A description of variables and acronyms is included.
DOI: 10.23719/1520143
title: SWAT_Results_For_GRIP

description: model output from SWAT model without calibration and with calibration Gauge station 04159492, 02GG006, and 04213000
DOI: 10.23719/1520732
title: Theoretical Equilibrium Lead Solubility Revisited: Open Source Code and Practical Relationships (Figure Data)

description: The dataset includes the data used to create the figures in the manuscript.
DOI: 10.23719/1520756
title: MagnusonMatthew_A-0zpn_dataset_20210203.xlsx

description: Data corresponding to graphs in the conference proceedings.
DOI: 10.23719/1520770
title: ConleyJustin_A-b5mz_Dataset_20201021

description: This dataset is limited to the human counting values of multinucleated germ cells in treatment-blinded images of rat fetal testes conducted by EPA researcher Justin Conley for comparison by collaborators at Brown University to germ cell counts made using an automated method created by the collaborators.
DOI: 10.23719/1520879
title: Simulations of Dispersion through an Irregular Urban Building Array

description: The data files consist of tracer concentrations and velocity measurements gathered from EPA's Meteorological Wind Tunnel Laboratory.
DOI: 10.23719/1520953
title: National Water Withdrawal Totals By Industry 2015

description: This dataset contains 2015 national level water withdrawal by North American Industry Classification System (NAICS) 2012 6-digit codes. This dataset was created in FLOWSA, a publicly available python package that generates standardized environmental flows by industry.
DOI: 10.23719/1521111
title: Meta-Analysis and modeling of vegetated filter removal of sediment using global dataset

description: Data on vegetated filter strips, sediment loading into and out of riparian corridors/buffers (VFS), removal efficiency of sediment, meta-analysis of removal efficiencies, dimensional analysis of predictor variables, and regression modeling of VFS removal efficiencies.
DOI: 10.23719/1521124
title: San_Juan_PR_mangrove_cores_2016_AR_DBD_CN_isotopes

description: Dataset provides mangrove soil accretion rates, dry bulk density, %carbon, %nitrogen, nitrogen, carbon and sulfur stable isotopes from 5 sites in the San Juan Bay Estuary, Puerto Rico.
DOI: 10.23719/1521133
title: Nitrate response to wetlands in UMRB

description: The dataset includes all the information necessary to re-create Figures 1 through 6 of the manuscript.
DOI: 10.23719/1521261
title: The Dynamicity of Acute Ozone-Induced Systemic Leukocyte Trafficking and Adrenal-Derived Stress Hormones

description: Ozone exposure induces neuroendocrine stress response, which causes lymphopenia. We hypothesized that ozone-induced increases in stress hormones will temporally follow changes in circulating granulocytes, monocytes and lymphocyte subpopulations. The goal of this study was to chronicle the changes in circulating stress hormones, cytokines, and leukocyte trafficking during 4-hour exposure to ozone. Male Wistar Kyoto rats were exposed to air or ozone (0.4 or 0.8 ppm) for 0.5, 1, 2, or 4 hours. After each time point, we assessed, circulating stress hormones and cytokines, lung gene expression, and live and apoptotic granulocytes, monocytes (classical and non-classical), and lymphocytes (B, Th and Tc) in blood, thymus and spleen using flow cytometry.
DOI: 10.23719/1521269
title: publication of RARE project mercury results

description: mercury concentrations determined in fish tissue samples collected from the Penobscot River, Maine
DOI: 10.23719/1521336
title: genomic and endocrine effects of in utero p[hthalates

description: effects of in utero phthalate and other chemical administration on male rat sexual differentiation: Non PPAR mediated AOP
DOI: 10.23719/1521337
title: USEEIOv2.0

description: This dataset provides the waste sector disaggregation data, model component matrices, model result matrices, model price adjustment matrices, and associated metadata for the USEEIOv2.0 model. This model was generated using useeiorv0.4 (https://github.com/USEPA/useeior/tree/v0.4/) by calling the buildModel() function and passing "USEEIOv2.0" as the model. This uses the model configuration file, which can be found @ https://github.com/USEPA/useeior/blob/v0.4/inst/extdata/modelspecs/USEEIOv2.0.yml. The resulting model was exported using the writeModeltoXLSX() function to create this dataset. The waste disaggregation data are required for model building and also embedded in the useeiorv0.4. The generateModelIdentifier() function was used on the same model create the model identifier. The US dollar (USD) year for the model data, where USD is used, is 2012. See any additional notes in Contents on specific components. A complete description can be found in the associated manuscript.
DOI: 10.23719/1522293
title: Estimating PM2.5-related premature mortality and morbidity associated with future wildfire emissions in the western US

description: Wildfire burned area, emissions, concentrations, and health impact modeling datasets
DOI: 10.23719/1522298
title: Analysis of transcriptomic data from duodena of mice exposed to hexavalent chromium in drinking water: Supplemental data supporting a research report. 

description: These secondary data have been produced from the gene expression data generated from duodena of mice exposed to hexavalent chromium in drinking water and deposited in the GEO repository under accession number GSE87259. They include (i) inferred upstream regulators responsible for the observed changes in gene expression, (ii) genes significantly differentially expressed between duodena of exposed and control mice, and (iii) list of CFTR gene variants associated with cancers in COSMIC tumor repository.
DOI: 10.23719/1522582
title: BSEE Linear Boom In Situ Oil Burn Data 

description: The efficiency of simulated at-sea surface oil burns (in situ burns, ISB) was determined while testing varied boom configurations and air-assist nozzles to improve combustion. Tests were conducted in a 14.3 m x 2.4 m x 2.4 m tank under both calm and wave-action conditions. Emissions and residual uncombusted oil were sampled to characterize the effect of variations in boom length/width ratios, injection air, and presence or absence of waves. Tests were done with 30 L of Alaska North Slope oil within an outdoor, above ground, fresh water, 63 m3 tank equipped with wave actuators and baffles. The combustion plume was sampled for emissions using a crane-suspended instrument system. Combustion efficiencies based on unburned carbon in the plume emissions ranged from 85% to 93%. Efficiencies based on oil mass loss ranged from 89% to 99% but were not predicted by changes in boom ratio, air injection, or the presence of waves. A four-fold variation in PM2.5 emission factors was observed from the test conditions and the most effective burns in terms of reduced emissions were those that had high length to width boom ratios resulting in higher flame front surface area exposure to ambient air. The presence of added injection air near the oil/water/flame interface had no statistical effect on the combustion efficiency, suggesting that added oxygen and air-induced turbulence at the oil/flame interface was not limiting the combustion rate. The presence of waves had a limited detrimental effect on combustion emissions, possibly caused by enhancing heat loss from the burning oil to the water below. Post-burn, residual oil samples were collected and analyzed to show that the total petroleum hydrocarbon (TPH) concentration in the residuals decreased as the oil mass loss increased. The amount of oil mass lost was not related to any combustion efficiency parameters or pollutant levels. However, TPH in residues were significantly lower at higher boom ratios in the control and air plus waves tests.
DOI: 10.23719/1522612
title: Greenhouse gas emissions from an arid-zone reservoir and their environmental policy significance: results from existing global models and an exploratory dataset

description: This data release contains model inputs used to estimate surface water greenhouse gas fluxes from two large arid reservoirs, Lake Powell and Lake Mead. The release also contains empirical, spatially explicit water quality and greenhouse gas data from a single field survey conducted in Lake Powell in July of 2017. Finally, this release contains surface area estimates of shallow (< 15m) tributary regions of Lake Powell under different water level scenarios.
DOI: 10.23719/1522858
title: A sensitivity analysis of a human exposure model using the Sobol method

description: Data and code associated with "Langstaff, J., Glen, G., Holder, C. et al. A sensitivity analysis of a human exposure model using the Sobol method. Stoch Environ Res Risk Assess 36, 3945–3960 (2022). https://doi.org/10.1007/s00477-022-02238-7"
DOI: 10.23719/1522921
title: Measurements of SARS-CoV-2 and target concentrations in wastewater near Cincinnati, OH, from May to October 2020.

description: This dataset contains the raw droplet counts resulting from of ddPCR or RT-ddPCR of nucleic acid extracts from wastewater. The wastewater was collected from three different sewersheds in Southwest Ohio (Mill Creek WWTP, Taylor Creek WWTP, and a sub-sewershed, Lick Run). ddPCR counts (positive droplets and total droplets) are provided for the following targets: N1 and N2 (SARS-CoV-2 nucleocapsid genes), crAssphage, PMMoV, HF183 (all fecal indicators), and OC43 (an RNA spike-in from a cultured coronavirus). Other metadata (pH, flow, temperature, TSS, CBOD5) are provided where available.
DOI: 10.23719/1522934
title: Combustion of C1 and C2 PFAS: Figures 1 and 2

description: This dataset includes values used to generate Figure 1, 2, and 3 in the manuscript. Figure 1 is a diagram of the incinerator with residence times and associated temperatures. Figure 2 is a temperature versus residence time plot for each of the firing rates. Figure 3 is FTIR data used to generate time series plots of concentrations.
DOI: 10.23719/1523134
title: Dataset and Dictionary for WV Tanks Paper

description: The dataset contains the data found in the figures of the paper "Methane Emissions from Oil and Gas Production Sites and Their Storage Tanks in West Virginia", along with a data dictionary
DOI: 10.23719/1523149
title: Evaluating adaptive stress response gene signatures using transcriptomics- Data for Figures 1-4

description: The construction of SRP consensus signatures sets was completed in three steps. First, we constructed consensus signatures by merging and pruning relevant gene sets from the MSigDB v7.1. Second, we developed an independent gene expression validation set by identifying reference perturbagens from the literature and curating their transcriptomic profiles from publicly available sources. Third, we used gene set enrichment analysis (GSEA) to score matches between signatures and transcriptomic profiles. Lastly, we evaluated the performance of GSEA scores as classifiers of SRP activity within reference perturbagen transcriptomic profiles using ROC AUC analysis.
DOI: 10.23719/1523159
title: Sensitivity of Riparian Buffer Designs to Climate Change

description: In this study, we assessed sensitivity of watershed-specific riparian buffer zone (RBZ) designs to water quality indicator parameters  in the contemporary climate and in future extreme climatic conditions. we summarized the RBZ design strategy and evaluated five water quality indicator (WQI) parameters: Dissolved Oxygen (DO), Total Phosphorous (TP), Total Nitrogen (TN), Sediment (SD), and Biochemical Oxygen Demand (BD) as component of watershed ecosystem services through sensitivity analyses of 135 simulation scenarios. The scenarios included the width variation of six baseline RBZs (Grass, Urban, Two-zone Forest, Three-zone Forest, Wildlife, and Naturalized) in three watersheds within the Albemarle-Pamlico river basin (USA). Analyses revealed optimal RBZ designs.
DOI: 10.23719/1523341
title: Human-health impacts of controlling secondary air pollution precursors

description: Dataset includes CMAQv5.3.1 code used for emission reduction simulations and output from CMAQ for each pollutant at the county level.
DOI: 10.23719/1523343
title: Pesticide Residue Concentration in Honey Bee Hive Matrices

description: Pesticide concentrations determined in honey bee hive matrices from GC/qToF-MS analysis.  Including neonicotinoid concentrations determined by LC-MS/MS as published in Lin et al., 2021.
DOI: 10.23719/1524255
title: Dataset of Sorption and migration of organophosphate flame retardants between sources and settled dust

description: The dataset contains OPFR sorption and migration concentrations on settled dust. It was generated by EPA and published in peer reviewed journal.
DOI: 10.23719/1524264
title: Deep soil nitrogen storage slows nitrate leaching through the vadose zone [dataset]

description: This field study was designed to evaluate how nitrate leaching rates change with depth and how seasonal and annual variation in management (e.g., fertilizer input amount and summer irrigation) impact the transport of water and nutrients through the vadose zone. The field experiment was established in June 2016 with the uniform planting of a sweet corn crop across the whole ~0.8 ha site. In September 2016, monitoring networks were installed in two subfields, North and South, consisting of groundwater wells and vadose zone instrumentation installed near the center of each. Water was sampled every two weeks beginning in October 2016 and analyzed for nitrate. We present three years of nitrate data, modeled water flux, and post-harvest soil nutrient data starting in July 2017 and reported on a “fertilizer year” basis, defined as beginning in the summer, coinciding with the peak of the growing season when crop growth, irrigation rates, and fertilizer application are greatest (July-June; straddles two calendar years).
DOI: 10.23719/1524302
title: Long-term performance of three mesophilic anaerobic digesters to convert animal and agro-industrial wastes into organic fertilizer

description: Anaerobic digestion (AD) is a process used to convert animal and agro-industrial wastes to organic fertilizers. Since digester effluents are used as for cropland applications, we are interested to find out whether the quality of these organic fertilizers are impacted by the AD process. In addition, few studies have investigated the performance of AD in field conditions. In this study, we monitored the performance of three operational AD systems for two years. These three systems have different retention times (9, 12 and 34 days), that is how long the waste materials stay in the digester. We collected influent and effluent samples every two months and analyzed for pH, nutrients and metals. We found that the two shorter retention systems slightly decreased effluent pH while the long retention system significantly increased the effluent pH, i.e., by 1.8 unit. The 34-day retention system also removed more solids and increased ammonium-nitrogen in the effluent. We found no significant changes in the metals that we analyzed. These findings can assist in developing strategies for cleaner production using AD in an environmentally sustainable manner.
DOI: 10.23719/1524312
title: National Water Withdrawal Totals By Industry 2015 v1.1

description: This dataset contains 2015 national-level water withdrawal by North American Industry Classification System (NAICS) 2012 6-digit codes. This dataset was generated with FLOWSAv1.0.0 by calling the getFlowBySector() function and passing "Water_national_2015_m1" as the method name. FLOWSA is a publicly available python package that generates standardized environmental flows by industry (https://github.com/USEPA/flowsa/releases/tag/v1.0.0). The metadata text file included as a supporting document records the FLOWSA tool version and input dataset bibliographic details.
DOI: 10.23719/1524321
title: LPMA Hot Water

description: This dataset contains the molecular occurrence and concentration of Legionella pneumophila, M. avium, M. intracellulare and M. abscessus by structure type.
DOI: 10.23719/1524368
title: Quantification of microplastics in sediments from Narragansett Bay, Rhode Island USA using a novel isolation and extraction method

description: These are the raw data associated with the manuscript, "Quantification of microplastics in sediments from Narragansett Bay, Rhode Island USA using a novel isolation and extraction method" All raw data also appears within supplementary materials of this publication.
DOI: 10.23719/1524402
title: Variability of Microcystin-LR Standards Available from Seven Commercial Vendors

description: Analytical chemistry and toxicological assessment of microcystin-LR toxin standards from seven vendors; a comparison of mass, purity and toxicity based on label mass.
DOI: 10.23719/1524687
title: SciHub_CoV_012422

description: Data describes percent losses of SARS-CoV-2 from wastewater.  Also details recovery of endogenous SARS-CoV-2 from wastewater using two volumetrically different methods.
DOI: 10.23719/1524693
title: Grasslight_Data

description: Grasslight model simulations