cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh080525.07fu
title: SH080525.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25318/2410005701-eng
title: Leading indicator, International visitors entering or returning to Canada by land, by vehicle type, vehicle licence plate and traveller type

description: The table is part of Frontier Counts. The data comes from the Integrated Primary Inspection Line (IPIL), from the Canada Border Services Agency (CBSA). Keywords include: arrival, automobile, car, entry, excursionist, motorcycle, overnight, port of entry, same-day, tourism, tourist, travel and visit.
DOI: 10.25318/2410005701-fra
title: Indicateur avancé, Visiteurs internationaux entrant ou revenant au Canada par voie terrestre, selon le type de véhicule, la plaque d’immatriculation du véhicule et le type de voyageur

description: Le tableau fait partie du Dénombrement à la frontière. Les données proviennent de la Ligne d'inspection primaire intégrée (LIPI) de l'Agence des services frontaliers du Canada (ASFC). Les mots-clés incluent : arrivée, automobile, entrée, excursionniste, même jour, moto, nuitée, point d'entrée, tourisme, touriste, visite, voiture et voyage.
DOI: 10.6084/m9.figshare.19719202
title: Hot topics in ecology

description: See README in .xlsx file.
DOI: 10.5281/zenodo.6522743
title: ISWC2022_jopt_experiments

description: ISWC2022_sage_jopt_experiments
DOI: 10.5281/zenodo.6522742
title: ISWC2022_jopt_experiments

description: ISWC2022_sage_jopt_experiments
DOI: 10.25318/2410005801-eng
title: Leading indicator, Vehicles entering Canada by land, by vehicle type and licence plate

description: The table is part of Frontier Counts. The data comes from the Integrated Primary Inspection Line (IPIL), from the Canada Border Services Agency (CBSA). Keywords include: arrival, automobile, car, entry, international, motorcycle, port of entry, tourism, travel, traveller, visit and visitor.
DOI: 10.5281/zenodo.6522672
title: Encuesta de Salud y Alimentación de Adultos Mayores de la Ciudad de México 2021 (ENSAAM)

description: Amid the COVID-19 pandemic, the ENSAAM survey provides information about older adults residing in Mexico City. It pursues three aims: 1) to estimate the first-dose vaccination rates among older adults in Mexico City; 2) to analyze the psychosocial effects of the COVID-19 pandemic; and 3) to examine the subjective intrinsic capacity of older adults and relevant covariates. The survey covers the following domains: covid-19 topics, vaccination, socioeconomic status, labor, income, mental health, intrinsic capacity, social programs, food insecurity and water insecurity. Between April 22 and May 20, 2021 --when the first dose of the covid-19 vaccination campaign for older adults ended in Mexico City-- we conducted a probabilistic telephone cross-sectional survey representative of older adults (60+) residing in Mexico City who did not report having memory problems and who were able to respond the questions by themselves. Sampling weights are available. Respondents are from every municipality in Mexico City, with a sample size of 502; 56.8% are females and 44.7% are 70 years of age or older. It offers information to understand the social and health consequences of the pandemic and the lockdown measures among the elderly. This is the first dataset of the project.
description: Funding by the"Dirección de Investigación de la Universidad Iberoamericana" (DINV) in its 13th Call for Basic Science Research Projects.
DOI: 10.5281/zenodo.6522671
title: Encuesta de Salud y Alimentación de Adultos Mayores de la Ciudad de México 2021 (ENSAAM)

description: Amid the COVID-19 pandemic, the ENSAAM survey provides information about older adults residing in Mexico City. It pursues three aims: 1) to estimate the first-dose vaccination rates among older adults in Mexico City; 2) to analyze the psychosocial effects of the COVID-19 pandemic; and 3) to examine the subjective intrinsic capacity of older adults and relevant covariates. The survey covers the following domains: covid-19 topics, vaccination, socioeconomic status, labor, income, mental health, intrinsic capacity, social programs, food insecurity and water insecurity. Between April 22 and May 20, 2021 --when the first dose of the covid-19 vaccination campaign for older adults ended in Mexico City-- we conducted a probabilistic telephone cross-sectional survey representative of older adults (60+) residing in Mexico City who did not report having memory problems and who were able to respond the questions by themselves. Sampling weights are available. Respondents are from every municipality in Mexico City, with a sample size of 502; 56.8% are females and 44.7% are 70 years of age or older. It offers information to understand the social and health consequences of the pandemic and the lockdown measures among the elderly. This is the first dataset of the project.
description: Funding by the"Dirección de Investigación de la Universidad Iberoamericana" (DINV) in its 13th Call for Basic Science Research Projects.
DOI: 10.6084/m9.figshare.16441608
title: CLM output for "A Comparison of Land Surface Phenology in the Northern Hemisphere Derived from Satellite Remote Sensing and the Community Land Model"

description: This data set includes the Leaf Area Index (LAI) and net primary production (NPP) outputs from two data atmosphere forced CLM-only simulations. The manuscript titled "A Comparison of Land Surface Phenology in the Northern Hemisphere Derived from Satellite Remote Sensing and the Community Land Model" has been accepted by the Journal of Hydrometeorology for publication (doi: 10.1175/JHM-D-21-0169.1).
DOI: 10.34740/kaggle/dsv/3583094
title: Football Premier League - Players Stats Dataset
DOI: 10.25318/2410005801-fra
title: Indicateur avancé, Véhicules entrant au Canada par voie terrestre, selon le type de véhicule et la plaque d’immatriculation

description: Le tableau fait partie du Dénombrement à la frontière. Les données proviennent de la Ligne d'inspection primaire intégrée (LIPI) de l'Agence des services frontaliers du Canada (ASFC). Les mots-clés incluent : arrivée, automobile, entrée, international, moto, point d'entrée, tourisme, visite, visiteur, voiture, voyage et voyageur.
DOI: 10.5281/zenodo.6522747
title: Modified version of the Physionet database "MIT Normal Sinus Rhythm" as Machine Learning dataset

description: ECGs from the MIT-NSR database, modifications: scaled to a range -1 to 1 (non-linear) heart beats annotation as time series with value 1.0 at the point of the annotated beat and 0.0 else provided as csv with columns "beat", "channel 1", "channel 2", "time in sec"
DOI: 10.6084/m9.figshare.3761562.v2209
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.19719250
title: All_MarathonsData.RData.zip

description: Marathon results from California International, Chicago,Grandma's, Honolulu, Houston, Los Angeles, Marine Corps, NYC, Philadelphia, Twin Cities from 2000-2019
DOI: 10.6084/m9.figshare.19719250.v1
title: All_MarathonsData.RData.zip

description: Marathon results from California International, Chicago,Grandma's, Honolulu, Houston, Los Angeles, Marine Corps, NYC, Philadelphia, Twin Cities from 2000-2019
DOI: 10.23641/asha.19686510
title: Validating moment analysis in disharmony patients (Jhingree et al., 2022)

description: <strong>Purpose: </strong>This study examined the relationship between judged speech sound distortions and spectral moment metrics in speakers with Class III malocclusion. <strong>Method: </strong>A quantitative online survey was distributed to 30 speech specialists (clinicians and/or students) and 100 lay listeners to judge the clarity of the sounds /s/, /ʃ/, /t/, and /k/ using a visual analog scale (VAS) from recordings of 11 Class III (underbite) dentofacial disharmony (DFD) patients and eight Class I controls. Patients and controls were grouped according to high, moderate, and low /s/−/ʃ/ first spectral moment differences. A linear mixed model was used to analyze the data. <strong>Results: </strong>VAS scale ratings increased as a function of decreasing spectral contrast for both groups of listeners. VAS ratings of speech specialists were more homogenous than lay listeners, and speech specialists rated distortions as less severe than lay listeners. <strong>Conclusions: </strong>Recordings of Class III DFD patients with low /s/−/ʃ/ first spectral moment differences were scored by listeners as having increased VAS scale ratings, indicative of more significant perceived speech-sound distortions. Spectral moment analysis appears to be a promising approach for characterizing speech of DFD patients and other craniofacial disorders. <br> <strong>Supplemental Material S1. </strong>Visual analog scale for recording scales. (A) Question and scale for a /s/ word. (B) Question and scale for a /ʃ/ word. <br> <strong>Supplemental Material S2. </strong>Word list for speech evaluations. <br> <strong>Supplemental Material S3.</strong> Class III DFD patient and recording demographics for /t/ and /k/. <br> <strong>Supplemental Material S4. </strong>Correlation between mean word sounds between lay people and speech professionals. <br> <strong>Supplemental Material S5. </strong>Correlation between log10 mean word sounds between lay people and speech professionals. <br> Jhingree, S., Xie, Y., Bocklage, C., Giduz, B., Moss, K., Zajac, D., & Jacox, L. A. (2022). Validating spectral moment analysis as a quantitative measure of speech distortions in speakers with Class III malocclusions. <em>Perspectives of the ASHA Special Interest Groups</em>. Advance online publication. https://doi.org/10.1044/2022_PERSP-21-00315
DOI: 10.5517/ccdc.csd.cc29zfmc
title: CCDC 2144413: Experimental Crystal Structure Determination

description: Related Article: F. W. Heinemann, C. Schickaneder, R. Alsfasser|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc29zfnd
title: CCDC 2144414: Experimental Crystal Structure Determination

description: Related Article: F. W. Heinemann, C. Schickaneder, R. Alsfasser|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc29zr57
title: CCDC 2144709: Experimental Crystal Structure Determination

description: Related Article: Nural Amin Sk, Nandakumar Katakam, Daniel K. Unruh, Clemens Krempner|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b02hy
title: CCDC 2145029: Experimental Crystal Structure Determination

description: Related Article: Andrei S. Batsanov, Benjamin G. Davis, Alison L. Hall|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b4q9j
title: CCDC 2149487: Experimental Crystal Structure Determination

description: Related Article: Sergely Steephen Bokouende, Cassandra L. Ward, Matthew J. Allen|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b4qhq
title: CCDC 2149493: Experimental Crystal Structure Determination

description: Related Article: Andrei S. Batsanov, Igor F. Perepichka|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b4qjr
title: CCDC 2149494: Experimental Crystal Structure Determination

description: Related Article: Andrei S. Batsanov, Igor F. Perepichka|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b4qks
title: CCDC 2149495: Experimental Crystal Structure Determination

description: Related Article: Andrei S. Batsanov, Igor F. Perepichka|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b4s9l
title: CCDC 2149549: Experimental Crystal Structure Determination

description: Related Article: Emmi Myllykylä, Reijo Sillanpää|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b4sdp
title: CCDC 2149552: Experimental Crystal Structure Determination

description: Related Article: Patrycja Wytrych, Józef Utko, Tadeusz Lis|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b4w1f
title: CCDC 2149634: Experimental Crystal Structure Determination

description: Related Article: Andrei S. Batsanov, Martin R. Brycea|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b4y4l
title: CCDC 2149699: Experimental Crystal Structure Determination

description: Related Article: Hans Gildenast|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2b4yjz
title: CCDC 2149711: Experimental Crystal Structure Determination

description: Related Article: Goutam Kumar Kole, Mukesh  Kumar|2022|CSD Communication|||
DOI: 10.6084/m9.figshare.16992388
title: Sonmez_Extended_Data3

description: Homozygous SNP/indel variants identified between Sonmez and CS
DOI: 10.6084/m9.figshare.16992388.v1
title: Sonmez_Data_file3

description: Homozygous SNP/indel variants identified between Sonmez and CS
DOI: 10.5281/zenodo.6521497
title: Dataset for Cicerale, Blanzieri, Sacco - How does decision-making change during challenging periods?

description: Dataset for experiment 1 (Bataclan terror attacks) and 2 (COVID pandemic - 1st and 2nd wave), results described in Cicerale, Blanzieri, Sacco - How does decision-making change during challenging periods?, submitted to PLOS ONE. Version 2: Added dataset in CSV format, column keys and the original questions in Italian
DOI: 10.5281/zenodo.5791451
title: Dataset for Cicerale, Blanzieri, Sacco - How does decision-making change during challenging periods?

description: Dataset for experiment 1 (Bataclan terror attacks) and 2 (COVID pandemic - 1st and 2nd wave), results described in Cicerale, Blanzieri, Sacco - How does decision-making change during challenging periods?, submitted to PLOS ONE. Version 2: Added dataset in CSV format, column keys and the original questions in Italian
DOI: 10.6084/m9.figshare.19330541
title: Interpreting the importance of transcript features in protein abundance prediction models

description: Supplementary Tables S1-S8.<br>Protein and mRNA levels correlate only moderately across samples. The availability of proteogenomics data sets with protein and transcript measurements from matching samples is providing new opportunities to assess the degree to which protein levels in a system can be predicted from mRNA information. We analyzed large proteogenomics datasets from the Clinical Proteomic Tumor Analysis Consortium (CPTAC) containing 13 637 proteins with matching transcriptome data from up to 958 tumor or normal adjacent tissue samples each, and trained models to predict protein abundance from the transcriptome of a sample using different algorithms and feature sets.<br>
DOI: 10.6084/m9.figshare.19330541.v3
title: Interpreting the importance of transcript features in protein abundance prediction models

description: Supplementary Tables S1-S8.<br>Protein and mRNA levels correlate only moderately across samples. The availability of proteogenomics data sets with protein and transcript measurements from matching samples is providing new opportunities to assess the degree to which protein levels in a system can be predicted from mRNA information. We analyzed large proteogenomics datasets from the Clinical Proteomic Tumor Analysis Consortium (CPTAC) containing 13 637 proteins with matching transcriptome data from up to 958 tumor or normal adjacent tissue samples each, and trained models to predict protein abundance from the transcriptome of a sample using different algorithms and feature sets.<br>
DOI: 10.25345/c50k26g0w
title: MassIVE MSV000089425 - Proteome Remodeling of the Eye Lens at 50 Years Identified with Data-Independent Acquisition Mass Spectrometry
title: The eye lens is responsible for focusing and transmitting light to the retina. The lens does this in the absence of organelles yet maintains transparency for at least five decades before onset of age-related nuclear cataract (ARNC). It is hypothesized that oxidative stress contributes significantly to ARNC formation. It is additionally hypothesized that transparency is maintained by a microcirculation system (MCS) that delivers antioxidants to the lens nucleus and exports small molecule waste. Commonly used data-dependent acquisition (DDA) proteomics methods are hindered by the dynamic range of protein expression in the lens and provide limited context to age-related changes in the lens. In this study we utilized data-independent acquisition (DIA) mass spectrometry proteomics to analyze the urea insoluble, membrane protein fractions of 16 human lenses subdivided into three spatially distinct lens regions to characterize age-related changes, particularly concerning the lens MCS and oxidative stress response. In this pilot cohort, using the DIA approach, we measured 4,788 distinct protein groups, and 46,681 peptides, more than in any previous human lens DDA approach. Our results reveal age-related changes previously known in lens biology and expand on these findings, taking advantage of the rich dataset afforded by DIA mass spectrometry. Principally, we demonstrate that a significant proteome remodeling event occurs at approximately 50 years of age, resulting in metabolic preference for anaerobic glycolysis established with organelle degradation, decreased abundance of protein networks involved in calcium-dependent cell-cell contacts while retaining networks related to oxidative stress response. Further, we demonstrate the first identification of multiple antioxidant transporter proteins not previously shown in the human lens and describe their spatiotemporal and age-related abundance changes. Finally, we demonstrate that Aquaporin-5, among other proteins, is depleted with age. We suggest that the continued accumulation of each of these age-related outcomes in proteome remodeling contribute to decrease in fiber cell permeability and result in ARNC formation.
DOI: 10.5066/p9z37s8q
title: Models describing the distribution of chickens, ducks, and geese in China

description: This data release provides models detailing previous efforts to understand the distribution of domestic poultry throughout China. These data support a previous USGS publication.
DOI: 10.5517/ccdc.csd.cc29jf2c
title: CCDC 2130942: Experimental Crystal Structure Determination

description: Related Article: Kun Liu, Shuai Li, Liyuan Fu, Yilong Lei, Qing Liao, Hongbing Fu|2022|Nanoscale|14|6305|doi:10.1039/D2NR00757F
DOI: 10.5517/ccdc.csd.cc29jf5g
title: CCDC 2130945: Experimental Crystal Structure Determination

description: Related Article: Kun Liu, Shuai Li, Liyuan Fu, Yilong Lei, Qing Liao, Hongbing Fu|2022|Nanoscale|14|6305|doi:10.1039/D2NR00757F
DOI: 10.5281/zenodo.6517398
title: The PI-CAI Challenge: Public Training and Development Dataset

description: This dataset represents the <strong>PI-CAI: Public Training and Development Dataset</strong>. It contains 1500 anonymized prostate biparametric MRI scans from 1476 patients, acquired between 2012-2021, at three centers (Radboud University Medical Center, University Medical Center Groningen, Ziekenhuis Groep Twente) based in The Netherlands. The PI-CAI challenge is an all-new grand challenge that aims to validate the diagnostic performance of artificial intelligence and radiologists at clinically significant prostate cancer (csPCa) detection/diagnosis in MRI, with histopathology and follow-up (≥ 3 years) as the reference standard, in a retrospective setting. The study hypothesizes that state-of-the-art AI algorithms, trained using thousands of patient exams, are non-inferior to radiologists reading bpMRI. Key aspects of the PI-CAI study design have been established in conjunction with an international scientific advisory board of 16 experts in prostate AI, radiology and urology —to unify and standardize present-day guidelines, and to ensure meaningful validation of prostate AI towards clinical translation (<strong>Reinke et al., 2021</strong>).
DOI: 10.5281/zenodo.6522811
title: European Aerosol Phenomenology - 8: Harmonised Source Apportionment of Organic Aerosol using 22 Year-long ACSM/AMS Datasets

description: Organic aerosol (OA) is a key component to total submicron particulate matter (PM<sub>1</sub>), and comprehensive knowledge of OA sources across Europe is crucial to mitigate PM<sub>1</sub> levels. Europe has a well-established air quality research infrastructure from which yearlong datasets using 21 aerosol chemical speciation monitors (ACSMs) and 1 aerosol mass spectrometer (AMS) were gathered during 2013-2019. It includes 9 non-urban and 13 urban sites. This study developed a state-of-the-art source apportionment protocol to analyse long-term OA mass spectrum data by applying the most advanced source apportionment strategies (i.e., rolling PMF, ME-2, and bootstrap). This harmonised protocol was followed strictly for all 22 datasets, making the source apportionment results more comparable. In addition, it enables the quantifications of the most common OA components such as hydrocarbon-like OA (HOA), biomass burning OA (BBOA), cooking-like OA (COA), more oxidised-oxygenated OA (MO-OOA), and less oxidised-oxygenated OA (LO-OOA). Other components such as coal combustion OA (CCOA), solid fuel OA (SFOA: mainly mixture of coal and peat combustion), cigarette smoke OA (CSOA), sea salt (mostly inorganic but part of the OA mass spectrum), coffee OA, and ship industry OA could also be separated at a few specific sites. Oxygenated OA (OOA) components make up most of the submicron OA mass (average = 71.1%, range from 43.7 to 100%). Solid fuel combustion-related OA components (i.e., BBOA, CCOA, and SFOA) are still considerable with in total 16.0% yearly contribution to the OA, yet mainly during winter months (21.4%). Overall, this comprehensive protocol works effectively across all sites governed by different sources and generates robust and consistent source apportionment results. Our work presents a comprehensive overview of OA sources in Europe with a unique combination of high time resolution (30-240 minutes) and long-term data coverage (9-36 months), providing essential information to improve/validate air quality, health impact, and climate models.
DOI: 10.5281/zenodo.6519122
title: Data corresponding to "The Impact of Multi-sensor Land Data Assimilation on River Discharge Estimation"

description: This dataset is corresponding to the input and output files that were used in this study: Wu, W.-Y., Z.-L. Yang, L. Zhao, P. Lin (2022), Joint Multi-sensor Data Assimilation for Constraining Water Storages and its Impact on Global Discharge Estimation (<em>in revision, RSE</em>)
description: Please contact the author when using this dataset for publication.
DOI: 10.5281/zenodo.6522329
title: test upload to demonstrate private sharing for peer review

description: disclose data for double-blind review and make it archived open data upon acceptance
DOI: 10.5281/zenodo.6522328
title: test upload to demonstrate private sharing for peer review

description: disclose data for double-blind review and make it archived open data upon acceptance
DOI: 10.5281/zenodo.6519477
title: Optokinetic set-point adaptation functions as an internal dynamic calibration mechanism for oculomotor disequilibrium

description: Raw data for "Optokinetic set-point adaptation functions as an internal dynamic calibration mechanism for oculomotor disequilibrium".