cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5771709.v1
title: MOESM5 of Global sequence diversity of the lactate dehydrogenase gene in Plasmodium falciparum

description: Additional file 5. Sequence alignment of Plasmodium falciparum LDH epitopes in immunodiagnostic assays and LDH sequences of human Plasmodium species. Only LDH sequences that were different from LDH epitopes were shown. Letters in grey indicate polymorphic amino acid residues. Dot (.) indicates an amino acid residue identical to that of LDH epitopes.
DOI: 10.6084/m9.figshare.5771679
title: MOESM3 of Global sequence diversity of the lactate dehydrogenase gene in Plasmodium falciparum

description: Additional file 3. Nucleotide sequence IDs of the ldh gene of the malaria parasites of humans and non-human primates.
DOI: 10.6084/m9.figshare.5771679.v1
title: MOESM3 of Global sequence diversity of the lactate dehydrogenase gene in Plasmodium falciparum

description: Additional file 3. Nucleotide sequence IDs of the ldh gene of the malaria parasites of humans and non-human primates.
DOI: 10.6084/m9.figshare.5771664
title: MOESM3 of Insights into metabolic osmoadaptation of the ectoines-producer bacterium Chromohalobacter salexigens through a high-quality genome scale metabolic model

description: Additional file 3: Table S7. Essential genes at low and high salinity and their associated COGs.
DOI: 10.6084/m9.figshare.5771664.v1
title: MOESM3 of Insights into metabolic osmoadaptation of the ectoines-producer bacterium Chromohalobacter salexigens through a high-quality genome scale metabolic model

description: Additional file 3: Table S7. Essential genes at low and high salinity and their associated COGs.
DOI: 10.6084/m9.figshare.5771661
title: MOESM2 of Global sequence diversity of the lactate dehydrogenase gene in Plasmodium falciparum

description: Additional file 2. Nucleotide sequence IDs of the ldh gene of Plasmodium falciparum from different geographical locations.
DOI: 10.6084/m9.figshare.5771661.v1
title: MOESM2 of Global sequence diversity of the lactate dehydrogenase gene in Plasmodium falciparum

description: Additional file 2. Nucleotide sequence IDs of the ldh gene of Plasmodium falciparum from different geographical locations.
DOI: 10.6084/m9.figshare.5771652
title: Additional file 1: Table S1. of Ecological distribution and population dynamics of Rift Valley fever virus mosquito vectors (Diptera, Culicidae) in Senegal

description: Dates of collections, names of sampling sites, geographical coordinates, abundance of mosquito species collected/date, and environmental variables for mosquito collections at the three sampling sites in Senegal. (XLSX 38Â kb)
DOI: 10.6084/m9.figshare.5771652.v1
title: Additional file 1: Table S1. of Ecological distribution and population dynamics of Rift Valley fever virus mosquito vectors (Diptera, Culicidae) in Senegal

description: Dates of collections, names of sampling sites, geographical coordinates, abundance of mosquito species collected/date, and environmental variables for mosquito collections at the three sampling sites in Senegal. (XLSX 38Â kb)
DOI: 10.6084/m9.figshare.5771649
title: MOESM3 of A new image-based tool for the high throughput phenotyping of pollen viability: evaluation of inter- and intra-cultivar diversity in grapevine

description: Additional file 3. Pollen images.
DOI: 10.6084/m9.figshare.5771649.v1
title: MOESM3 of A new image-based tool for the high throughput phenotyping of pollen viability: evaluation of inter- and intra-cultivar diversity in grapevine

description: Additional file 3. Pollen images.
DOI: 10.6084/m9.figshare.5771640
title: MOESM2 of Insights into metabolic osmoadaptation of the ectoines-producer bacterium Chromohalobacter salexigens through a high-quality genome scale metabolic model

description: Additional file 2. Genome-scale metabolic reconstruction of C. salexigens. Details of iPF764 containing all genes associated-reactions and metabolites.
DOI: 10.6084/m9.figshare.5771637
title: MOESM1 of Global sequence diversity of the lactate dehydrogenase gene in Plasmodium falciparum

description: Additional file 1. Nucleotide sequence IDs of the ldh gene of Plasmodium falciparum in Thailand.
DOI: 10.6084/m9.figshare.5771640.v1
title: MOESM2 of Insights into metabolic osmoadaptation of the ectoines-producer bacterium Chromohalobacter salexigens through a high-quality genome scale metabolic model

description: Additional file 2. Genome-scale metabolic reconstruction of C. salexigens. Details of iPF764 containing all genes associated-reactions and metabolites.
DOI: 10.6084/m9.figshare.5771637.v1
title: MOESM1 of Global sequence diversity of the lactate dehydrogenase gene in Plasmodium falciparum

description: Additional file 1. Nucleotide sequence IDs of the ldh gene of Plasmodium falciparum in Thailand.
DOI: 10.6084/m9.figshare.5771631
title: MOESM2 of A new image-based tool for the high throughput phenotyping of pollen viability: evaluation of inter- and intra-cultivar diversity in grapevine

description: Additional file 2. PollenCounter Fiji-compatible macro.
DOI: 10.6084/m9.figshare.5771631.v1
title: MOESM2 of A new image-based tool for the high throughput phenotyping of pollen viability: evaluation of inter- and intra-cultivar diversity in grapevine

description: Additional file 2. PollenCounter Fiji-compatible macro.
DOI: 10.6084/m9.figshare.5771607
title: MOESM1 of A new image-based tool for the high throughput phenotyping of pollen viability: evaluation of inter- and intra-cultivar diversity in grapevine

description: Additional file 1. List of the 120 grapevine accessions selected for this work. Accession code, cultivar name, and season sampled are indicated.
DOI: 10.6084/m9.figshare.5771607.v1
title: MOESM1 of A new image-based tool for the high throughput phenotyping of pollen viability: evaluation of inter- and intra-cultivar diversity in grapevine

description: Additional file 1. List of the 120 grapevine accessions selected for this work. Accession code, cultivar name, and season sampled are indicated.
DOI: 10.6084/m9.figshare.5771511
title: MOESM2 of Hiss and snort call types of wild-living giraffes Giraffa camelopardalis: acoustic structure and context

description: Additional file 2: Table S1. Table with acoustic measurements of giraffe hisses and snorts for describing the acoustic features of these two call types.
DOI: 10.6084/m9.figshare.5771511.v1
title: MOESM2 of Hiss and snort call types of wild-living giraffes Giraffa camelopardalis: acoustic structure and context

description: Additional file 2: Table S1. Table with acoustic measurements of giraffe hisses and snorts for describing the acoustic features of these two call types.
DOI: 10.6084/m9.figshare.5771496
title: Immunocytochemistry of corneal endothelial cells proliferation uncoated, collagen and Matrigel-coated plates

description: Six White New Zealand rabbits 3-month-old were sacrificed under general anesthesia and a lethal intracardiac injection of sodic pentobarbital. A corneoscleral rim excision was made and the conjunctiva was dissected. Lens and aqueous humor were removed and the corneas were obtained. Under sterile conditions, Descemet’s membrane were separated from corneal stroma and rinsed with basal stabilizer medium (SM) containing OptiMEM-I 8% fetal bovine serum (FBS) and 1% antibiotics. Corneal endothelia were peeled off from the Descemet’s membrane and a ~5 mm2 section was cultured in proliferative medium (PM) containing OptiMEM-I 8% FBS, 20 ng/mL of nerve growth factor (NGF), 5 ng/mL of epidermal growth factor (EGF), 200 µg/L of calcium chloride, 20 µg/mL of ascorbic acid, 0.08% chondroitin sulfate, and antibiotics over Matrigel, Collagen I or no coated plate until confluence (~90% of the plate showed adherent cells, ~15 days). The plates were tripzinised and cultured in SM. Morphological changes were photodocumented. RNA was isolated from CEC cultured in PM and SM. Final point RT-PCRs were made to analyze the expression of the specific CECs markers: glypican-4 (GPC4), tight junction protein 1 (TJP1), and CD200; housekeeping gene glyceraldehyde phosphate dehydrogenase (GAPDH) was used. Electrophoresis of PCR products was performed on a 2% agarose gel and the bands were photodocumented. Immunocytochemistry was performed to analyze the presence of GPC4 and Na/K-ATPase in CEC cultured in each condition. Images were obtained with a fluorescence inverted microscope.
DOI: 10.6084/m9.figshare.5771490.v1
title: Vogue-Australia-Index-1952-2011-V20180101.xlsx

description: Vogue Australia was created to celebrate Australian fashion and lifestyle as a branch of one of the most powerful and significant media corporations of the 20th Century. With its near 70-year history in Australia, it has become a priceless source of social and cultural information.<br><br>Holdings and frequency of this publication is problematic and irregular which led to the creation of this data set. Information has been obtained by comparing holdings and physically examining every issue of this publication. <br><br>The excel spreadsheet includes:- Frequency issue/month - Name in sequence (No., Whole No., and Volume) and name differentiation e.g. same last issue of the year called: Christmas in 1962 and December in 1980.<br>- Holding Location: with emphasis on RMIT Design Archives collection. The RMIT Design Archives contains more than 600 non-bound issues of Vogue Australia. State and National Libraries.<br><br>Data owner welcomes and feedback, corrections, or amendments as appropriate on this data, as this is not exhaustive.<br>
DOI: 10.6084/m9.figshare.5771484
title: Contrast microscopy of corneal endothelial cells proliferation uncoated, collagen and Matrigel-coated plates

description: Six White New Zealand rabbits 3-month-old were sacrificed under general anesthesia and a lethal intracardiac injection of sodic pentobarbital. A corneoscleral rim excision was made and the conjunctiva was dissected. Lens and aqueous humor were removed and the corneas were obtained. Under sterile conditions, Descemet’s membrane were separated from corneal stroma and rinsed with basal stabilizer medium (SM) containing OptiMEM-I 8% fetal bovine serum (FBS) and 1% antibiotics. Corneal endothelia were peeled off from the Descemet’s membrane and a ~5 mm2 section was cultured in proliferative medium (PM) containing OptiMEM-I 8% FBS, 20 ng/mL of nerve growth factor (NGF), 5 ng/mL of epidermal growth factor (EGF), 200 µg/L of calcium chloride, 20 µg/mL of ascorbic acid, 0.08% chondroitin sulfate, and antibiotics over Matrigel, Collagen I or no coated plate until confluence (~90% of the plate showed adherent cells, ~15 days). The plates were tripzinised and cultured in SM. Morphological changes were photodocumented. RNA was isolated from CEC cultured in PM and SM. Final point RT-PCRs were made to analyze the expression of the specific CECs markers: glypican-4 (GPC4), tight junction protein 1 (TJP1), and CD200; housekeeping gene glyceraldehyde phosphate dehydrogenase (GAPDH) was used. Electrophoresis of PCR products was performed on a 2% agarose gel and the bands were photodocumented. Immunocytochemistry was performed to analyze the presence of GPC4 and Na/K-ATPase in CEC cultured in each condition. Images were obtained with a fluorescence inverted microscope.
DOI: 10.6084/m9.figshare.5771457
title: IGT

description: Iowa Gambling Task
DOI: 10.6084/m9.figshare.5771436
title: Table 2.docx

description: Pearson correlation between soil C mineralization parameters, C content and C/N of labile fractions and microbial communities (n=12)
DOI: 10.6084/m9.figshare.5771436.v1
title: Table 2.docx

description: Pearson correlation between soil C mineralization parameters, C content and C/N of labile fractions and microbial communities (n=12)
DOI: 10.6084/m9.figshare.5771433
title: Table 1.docx

description: The parameters of curve fittings for all mineralization data using a parallel first-plus-zero-order kinetic model. Values are the means±SD (n=3).
DOI: 10.6084/m9.figshare.5771433.v1
title: Table 1.docx

description: The parameters of curve fittings for all mineralization data using a parallel first-plus-zero-order kinetic model. Values are the means±SD (n=3).
DOI: 10.6084/m9.figshare.5771376
title: L4_CpG_UCSC.bedgraph

description: RRBS datasets ZV9 48hpf embryos and 6dpf brain
DOI: 10.6084/m9.figshare.5771376.v1
title: L4_CpG_UCSC.bedgraph

description: RRBS datasets ZV9 48hpf embryos and 6dpf brain
DOI: 10.17608/k6.auckland.5771373
title: Chapter 8: Theorem of Gauss

description: A notebook to illustrate the application of the Theorem of Gauss to gravitational acceleration.<br>
DOI: 10.17608/k6.auckland.5771373.v2
title: Chapter 8: Theorem of Gauss

description: A notebook to illustrate the application of the Theorem of Gauss to gravitational acceleration.<br>
DOI: 10.6084/m9.figshare.5771364
title: Reddit Scholar Posts (Scraped from April - August 2014)

description: One file containing posts to Reddit's r/Scholar forum. These were scraped from April 2014 through August 2014. The following variables are available for each post:<br>*DayOfWeek*Date *Week *Title *User*Description*Link *FirstLinkProvided *FirstLinkProvidedDomain*UserSuppliedISBN*UserSuppliedPMID*UserSuppliedDOI<br><br><br>Preparation: <b>(1) Scraping:</b> Scraping took place via Google Sheets and Google Scripts. Google Sheets code used to scrape Reddit is available here: https://ctrlq.org/code/19600-reddit-scraper-script?_ga=2.69874256.1771062494.1515537454-939238282.1515537453<br><b>(2) Cleaning:</b> After scraping, data was cleaned and enriched in Excel. Extraneous HTML tags were removed and Excel's Text to Columns command was used to separate the posts into more easily analyzable chunks. Excel's IF, SEARCH, and FIND functions were used to extract the FirstLinkProvided, UserSupliedISBN, UserSuppliedPMID, and UserSuppliedDOI information. OpenRefine (http://openrefine.org) was used to turn the FirstLinkProvided values into the FirstLinkProviedDomain values.<br>Caveats: *Some posts requested more than one item. If two or more URLs were supplied in a post, only the first was captured by the URL extraction method used in Excel. *To allow for verification of the scrape's accuracy, a link back to each original post on Reddit is included. (These links also allow for researchers to see the comments on the original post, which may have been made after the scrape took place and are not included in this file.) Links to original posts reveal user information. Because identification of users would be a trivial matter for someone who followed links to the original posts, no attempts were made to anonymize user IDs in this file.
DOI: 10.6084/m9.figshare.5771331
title: ESSTATISTICA_todos.sav

description: SPSS File.
DOI: 10.6084/m9.figshare.5771331.v1
title: ESSTATISTICA_todos.sav

description: SPSS File.
DOI: 10.6084/m9.figshare.5771244
title: Litoral

description: Location vacances sur la Costa Dorada<br>
DOI: 10.6084/m9.figshare.5771244.v1
title: Litoral

description: Location vacances sur la Costa Dorada<br>
DOI: 10.6084/m9.figshare.5771175
title: Local-Likelihood Transformation Kernel Density Estimation for Positive Random Variables

description: The kernel estimator is known not to be adequate for estimating the density of a positive random variable <i>X</i>. The main reason is the well-known boundary bias problems that it suffers from, but also its poor behavior in the long right tail that such a density typically exhibits. A natural approach to this problem is to first estimate the density of the logarithm of <i>X</i>, and obtaining an estimate of the density of <i>X</i> using standard results on functions of random variables (“back-transformation”). Although intuitive, the basic application of this idea usually yields poor results, as was documented earlier in the literature. In this article, the main reason for this underachievement is identified, and an easy fix is suggested. It is demonstrated that combining the transformation with local-likelihood density estimation methods produces very good estimators of R+-supported densities, not only close to the boundary, but also in the right tail. The asymptotic properties of the proposed “local-likelihood transformation kernel density estimators” are derived for a generic transformation, not only for the logarithm, which allows one to consider other transformations as well. One of them, called the “probex” transformation, is given more focus. Finally, the excellent behavior of those estimators in practice is evidenced through a comprehensive simulation study and the analysis of several real datasets. A nice consequence of articulating the method around local-likelihood estimation is that the resulting density estimates are typically smooth and visually pleasant, without oversmoothing important features of the underlying density.
DOI: 10.6084/m9.figshare.5771175.v2
title: Local-Likelihood Transformation Kernel Density Estimation for Positive Random Variables

description: The kernel estimator is known not to be adequate for estimating the density of a positive random variable <i>X</i>. The main reason is the well-known boundary bias problems that it suffers from, but also its poor behavior in the long right tail that such a density typically exhibits. A natural approach to this problem is to first estimate the density of the logarithm of <i>X</i>, and obtaining an estimate of the density of <i>X</i> using standard results on functions of random variables (“back-transformation”). Although intuitive, the basic application of this idea usually yields poor results, as was documented earlier in the literature. In this article, the main reason for this underachievement is identified, and an easy fix is suggested. It is demonstrated that combining the transformation with local-likelihood density estimation methods produces very good estimators of R+-supported densities, not only close to the boundary, but also in the right tail. The asymptotic properties of the proposed “local-likelihood transformation kernel density estimators” are derived for a generic transformation, not only for the logarithm, which allows one to consider other transformations as well. One of them, called the “probex” transformation, is given more focus. Finally, the excellent behavior of those estimators in practice is evidenced through a comprehensive simulation study and the analysis of several real datasets. A nice consequence of articulating the method around local-likelihood estimation is that the resulting density estimates are typically smooth and visually pleasant, without oversmoothing important features of the underlying density.
DOI: 10.6084/m9.figshare.5771175.v1
title: Local-likelihood transformation kernel density estimation for positive random variables

description: The kernel estimator is known not to be adequate for estimating the density of a positive random variable <i>X</i>. The main reason is the well-known boundary bias problems that it suffers from, but also its poor behaviour in the long right tail that such a density typically exhibits. A natural approach to this problem is to first estimate the density of the logarithm of <i>X</i>, and obtaining an estimate of the density of <i>X</i> using standard results on functions of random variables (‘back-transformation’). Although intuitive, the basic application of this idea usually yields poor results, as was documented earlier in the literature. In this paper, the main reason for this underachievement is identified, and an easy fix is suggested. It is demonstrated that combining the transformation with local likelihood density estimation methods produces very good estimators of R+-supported densities, not only close to the boundary, but also in the right tail. The asymptotic properties of the proposed ‘local likelihood transformation kernel density estimators’ are derived for a generic transformation, not only for the logarithm, which allows one to consider other transformations as well. One of them, called the ‘probex’ transformation, is given more focus. Finally, the excellent behaviour of those estimators in practice is evidenced through a comprehensive simulation study and the analysis of several real data sets. A nice consequence of articulating the method around local-likelihood estimation is that the resulting density estimates are typically smooth and visually pleasant, without oversmoothing important features of the underlying density.
DOI: 10.6084/m9.figshare.5770176
title: Questionnaire results on perception of skills in laboratory training at Jordan University School of Medicine, 2015-2016

description: This data set consists of a single result set gathered from a questionnaire distributed to 122 medical students at Jordan University during the academic year 2015-2016.<br>The related cross-sectional study was conducted in the School of Medicine, Jordan University during 2016. Medical students not yet enrolled in skills lab training were recruited to the study. 64 6th-year and 58 4th-year medical students were invited to complete the questionnaire exploring their experiences, including their confidence in performing certain clinical procedures.<br><br>The file is in <b>.xlsx</b> format, accessible via MS excel or open office applications. <br>Coded responses to the following criteria are recorded for each respondent:<br><br>eight statements on respondents' expectations of laboratory training and skills, on the following four-point Likert scale:<br>· Strongly agree · Agree · Disagree · Strongly disagree<br>respondents' confidence in nine clinical skills on the following four-point Likert scale:<br>· Not confident· Somewhat confident· Very confident· Able to do independently<br>scores of ability level in nine clinical skills on the following scale:<br>1 to 10: 1 being least skilled and 10 being most skilled<br>The survey questions were obtained from an anonymous literature review. Identifiers of research participants have been removed to preserve anonymity.<br><b>Background</b>Clinical skills labs in Jordanian medical schools are relatively new. The related study explores medical students' expectations of skills lab training in performing certain clinical procedures including suturing, vascular access, intradermal and intramuscular injection, male and female catheterization, nasogastric tube placement, rectal examination and rectal enema, and endoscopy simulation. Furthermore, it evaluates the need for further utilization of the skills lab.<br><br>