cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.amnj6p
title: Occurrence Download

description: A dataset containing 156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Compilación de fonoteca de referencia de murciélagos insectívoros de México: Fase I",
 "TaxonKey is Tadarida brasiliensis (I.Geoffroy, 1824)"
 ]
}

 The dataset includes 156 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032375-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.erf9pt
title: Occurrence Download

description: A dataset containing 645 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pagrus major (Temminck & Schlegel, 1843)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 645 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032374-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3597857_d6
title: Additional file 3: Table S2. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

description: RAD SNPs differentiating males and females of the A. burtoni lab strain with corresponding BLAST results on the O. niloticus and A. burtoni genome. SNPs in bold show inheritance of alleles from father to sons only, supporting an XX-XY system. (XLS 56Â kb)
DOI: 10.6084/m9.figshare.c.3597857_d7
title: Additional file 4: Table S3. of Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni

description: RAD loci differentiating males and females of the A. burtoni Chipwa wild-caught fish with corresponding BLAST results on the O. niloticus genome. SNPs in bold show inheritance of alleles from father to sons only, supporting an XX-XY system. (XLS 807Â kb)
DOI: 10.6084/m9.figshare.c.3597884_d1
title: Additional file 9: of Initiator tRNA genes template the 3â ˛ CCA end at high frequencies in bacteria

description: Perl script to generate full data browser and iTol input. (TXT 18 kb)
DOI: 10.6084/m9.figshare.c.3597884_d2
title: Additional file 6: of Initiator tRNA genes template the 3â ˛ CCA end at high frequencies in bacteria

description: Installation code-base for the TFAM program. (ZIP 819 kb)
DOI: 10.6084/m9.figshare.c.3597890_d1
title: Additional file 1: Table S1. of The Eurasian invasion: phylogenomic data reveal multiple Southeast Asian origins for Indian Dragon Lizards

description: List of all the species and their associated localities used in this study. (XLSX 56Â kb)
DOI: 10.6084/m9.figshare.c.3597884_d3
title: Additional file 4: of Initiator tRNA genes template the 3â ˛ CCA end at high frequencies in bacteria

description: Prokaryotic genome size data from NCBI, downloaded on October 26, 2015. (TXT 10 MB)
DOI: 10.6084/m9.figshare.c.3597890_d3
title: Additional file 3: Table S3. of The Eurasian invasion: phylogenomic data reveal multiple Southeast Asian origins for Indian Dragon Lizards

description: Per locus metrics for the UCE sequence capture data. (XLSX 289Â kb)
DOI: 10.6084/m9.figshare.c.3597884_d4
title: Additional file 10: of Initiator tRNA genes template the 3â ˛ CCA end at high frequencies in bacteria

description: Color definitions for clades to generate Fig.Â 1. (TXT 625 bytes)
DOI: 10.6084/m9.figshare.c.3597884_d11
title: Additional file 14: of Initiator tRNA genes template the 3â ˛ CCA end at high frequencies in bacteria

description: List of FAST commands to reproduce frequency data shown in TablesÂ 1, 2, 3 and 4. (TXT 4 kb)
DOI: 10.6084/m9.figshare.c.3597884_d12
title: Additional file 5: of Initiator tRNA genes template the 3â ˛ CCA end at high frequencies in bacteria

description: NCBI taxonomy data required by compute_heatmap.pl (GZ 14 MB)
DOI: 10.6084/m9.figshare.c.3597956_d1
title: Additional file 2: of Effects of nutrition education on recurrent coronary events after percutaneous coronary intervention: A randomized clinical trial

description: Food intake dataset. Initial and final food intakes with the absolute and adjusted values of nutrients – carbohydrate (hc), protein (prot), fat, saturated fat (ags), fiber, sodium (na) and potassium (k). (XLSX 53 kb)
DOI: 10.15468/dl.p25w8r
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthopagrus taiwanensis Iwatsuki & Carpenter, 2006",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032376-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3597884_d13
title: Additional file 1: of Initiator tRNA genes template the 3â ˛ CCA end at high frequencies in bacteria

description: Reannotated tRNAdb-CE v.8 data in FastA format including TFAM scores and CCA reannotations. (TXT 43 MB)
DOI: 10.6084/m9.figshare.c.3597956_d2
title: Additional file 1: of Effects of nutrition education on recurrent coronary events after percutaneous coronary intervention: A randomized clinical trial

description: Raw database. All variables of baseline characteristics of participants and outcome measures. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.c.3597884_d14
title: Additional file 11: of Initiator tRNA genes template the 3â ˛ CCA end at high frequencies in bacteria

description: Phylogenetic tree in New Hampshire format of NCBI taxon IDs from NCBI Taxonomy corresponding to addresses_v4.txt.gz (TXT 8 kb)
DOI: 10.6084/m9.figshare.c.3597959_d2
title: Additional file 2: of Implementing drinking water feed additive strategies in post-weaning piglets, antibiotic reduction and performance impacts: case study

description: Facility Pictures. (ZIP 2811 kb)
DOI: 10.6084/m9.figshare.c.3597989_d2
title: Additional file 5: of Comparative morphological and molecular analysis confirms the presence of the West Nile virus mosquito vector, Culex univittatus, in the Iberian Peninsula

description: Data for the structures of male genitalia results of statistical analyses. (XLSX 252 kb)
DOI: 10.6084/m9.figshare.c.3597995_d8
title: Additional file 7: Table S4. of Integrated analyses of zebrafish miRNA and mRNA expression profiles identify miR-29b and miR-223 as potential regulators of optic nerve regeneration

description: Unfiltered enriched GO terms associated with miR-223 predicted target genes sourced from Targetscan Fish database. Table contains each GO category and p-value. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3598022_d8
title: Additional file 8: Model S8. of Living on the edge: substrate competition explains loss of robustness in mitochondrial fatty-acid oxidation disorders

description: Mouse-liver fatty acid beta-oxidation no competition. (XML 225Â kb)
DOI: 10.6084/m9.figshare.c.3597989_d8
title: Additional file 2: of Comparative morphological and molecular analysis confirms the presence of the West Nile virus mosquito vector, Culex univittatus, in the Iberian Peninsula

description: Samples analysed with respective morphological and molecular data. (XLSX 226 kb)
DOI: 10.6084/m9.figshare.c.3598022_d11
title: Additional file 5: Model S5. of Living on the edge: substrate competition explains loss of robustness in mitochondrial fatty-acid oxidation disorders

description: Mouse-liver fatty acid beta-oxidation competition. (XML 470Â kb)
DOI: 10.6084/m9.figshare.c.3598037_d1
title: Additional file 1: of Assessment of risk factors for cerebral oxygen desaturation during neonatal and infant general anesthesia: an observational, prospective study

description: â  Neonatal cerebral oxygenation changesâ   This file contains data about demographic, clinical characteristics and cerebral oxygenation changes during anesthesia of included patients. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.c.3598040_d1
title: Additional file 1: of Injuries in professional male football players in Kosovo: a descriptive epidemiological study

description: Raw Data. (XLSX 23Â kb)
DOI: 10.15468/dl.dreytn
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chrysophrys major Temminck & Schlegel, 1843",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 30 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032379-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14217712
title: Tabulation and interpolation of NLO neutrino-antineutrino production and scattering rates at MeV temperatures

description: This record contains data used in the paper "Neutrino-antineutrino production, annihilation, and scattering at MeV temperatures and NLO accuracy" 2412.03958. Please consult the main text for details on the tabulated coefficients and their proper implementations.

We provide numerical data and an interpolation routine (c-code) for evaluating double-differential rates, intended to facilitate possible studies of the full kinetic equations for neutrino decoupling in the early universe. These data can also be used to obtain integrated quantities, such as the energy density transfer rates, or neutrino interaction rates (e.g. 2312.07015). The QED corrections to the spectral functions were computed using an adapted version of the public code: https://doi.org/10.5281/zenodo.3478143 .

The archive file contains:



grid_ABCD.dat : recorded coefficients A, B, C, D (on p+,p- grid in units of QED plasma temperature)

interpolation.c : code to interpolate and calculate the (integrated) energy density transfer rates

aux/... : additional files needed for multidimensional integration routine "cubature"
DOI: 10.5281/zenodo.14217713
title: Tabulation and interpolation of NLO neutrino-antineutrino production and scattering rates at MeV temperatures

description: This record contains data used in the paper "Neutrino-antineutrino production, annihilation, and scattering at MeV temperatures and NLO accuracy" 2412.03958. Please consult the main text for details on the tabulated coefficients and their proper implementations.

We provide numerical data and an interpolation routine (c-code) for evaluating double-differential rates, intended to facilitate possible studies of the full kinetic equations for neutrino decoupling in the early universe. These data can also be used to obtain integrated quantities, such as the energy density transfer rates, or neutrino interaction rates (e.g. 2312.07015). The QED corrections to the spectral functions were computed using an adapted version of the public code: https://doi.org/10.5281/zenodo.3478143 .

The archive file contains:



grid_ABCD.dat : recorded coefficients A, B, C, D (on p+,p- grid in units of QED plasma temperature)

interpolation.c : code to interpolate and calculate the (integrated) energy density transfer rates

aux/... : additional files needed for multidimensional integration routine "cubature"
DOI: 10.15468/dl.5vbnek
title: Occurrence Download

description: A dataset containing 3626 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eciton hamatum (Fabricius, 1782)"
 ]
}

 The dataset includes 3626 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032378-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598076_d3
title: MOESM13 of Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila 
                     melanogaster

description: Additional file 13: Table S6. piRNAs mapping to TEs within genes (0-3 mismatches) in An. gambiae.
DOI: 10.6084/m9.figshare.c.3598076_d4
title: MOESM3 of Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila 
                     melanogaster

description: Additional file 3: Table S2. The piRNA pool derived from TE sequences in D. melanogaster and An. gambiae.
DOI: 10.6084/m9.figshare.c.3598088_d2
title: Additional file 4: of Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

description: SNPs with Bonferroni corrected p-values higher than 0.05 (−log10(p) ≥ 8.50) for the protein yield. Columns on table: SNP = marker name, CHR, position on bp, alleles, Beta = variation effect, SE = standard error for effect, P = p-value, minuslog10 = (−log10(p)-values), Bonferroni corrected p-value. For the rest of the columns, see explanation from http://www.ensembl.org/common/Help/Glossary?db=core . (XLSX 30 kb)
DOI: 10.6084/m9.figshare.c.3598085_d5
title: MOESM7 of Skeletal light-scattering accelerates bleaching response in reef-building corals

description: Additional file 7: Table S1a. Nucleotide sequencing. Primers [79â  82] and annealing temperatures used for polymerase chain reaction amplification and nucleotide sequencing.
DOI: 10.6084/m9.figshare.c.3598076_d14
title: MOESM15 of Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila 
                     melanogaster

description: Additional file 15: Table S8. GO annotation clusters of genes with high piRNA mapping in An. gambiae.
DOI: 10.6084/m9.figshare.c.3598076_d15
title: MOESM7 of Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila 
                     melanogaster

description: Additional file 9: Table S5. Distribution and composition of top 30 piRNA clusters in the Ae. aegypti genome.
DOI: 10.6084/m9.figshare.c.3598076_d16
title: MOESM14 of Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila 
                     melanogaster

description: Additional file 14: Table S7. TE family distribution of genic TE-mapping piRNAs in An. gambiae.
DOI: 10.6084/m9.figshare.c.3598112_d3
title: Additional file 8: of Distinct polymer physics principles govern chromatin dynamics in mouse and Drosophila topological domains

description: Quantitative 3C dataset for H1 TKO mouse embryonic stem cells. (XLS 86Â kb)
DOI: 10.15468/dl.e9w7yn
title: Occurrence Download

description: A dataset containing 134540 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Manchester Museum, University of Manchester, Botany Collection"
 ]
}

 The dataset includes 134540 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032352-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598076_d17
title: MOESM17 of Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila 
                     melanogaster

description: Additional file 17: Table S10. piRNA mapping to the piRNA pathway genes and â  reproduction and developmentâ   cluster genes in An. gambiae.
DOI: 10.15468/dl.9qutae
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pagrus auratus (Forster, 1801)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032381-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598136_d4
title: Additional file 6: of Untargeted metabolomics unravels functionalities of phosphorylation sites in Saccharomyces cerevisiae

description: Results self-correlation analysis phosphomutants across condition. (XLSX 14Â kb)
DOI: 10.6084/m9.figshare.c.3598151_d1
title: Additional file 4: of GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data

description: Compressed ZIP archive containing a sample Shiny application built on the data demonstrated in the paper. The archive also includes serialised R objects saved to files, such as the ExpressionSet described in the paper. (ZIP 7908Â kb)
DOI: 10.6084/m9.figshare.c.3598136_d5
title: Additional file 10: of Untargeted metabolomics unravels functionalities of phosphorylation sites in Saccharomyces cerevisiae

description: Detailed annotation from untargeted metabolomics. (XLSX 303Â kb)
DOI: 10.6084/m9.figshare.c.3598151_d2
title: Additional file 7: of GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data

description: Scoring table for GO terms produced by GOexpress using the ExpressionSet described in the paper (see Additional file 1). (XLSX 871Â kb)
DOI: 10.6084/m9.figshare.c.3598136_d6
title: Additional file 1: of Untargeted metabolomics unravels functionalities of phosphorylation sites in Saccharomyces cerevisiae

description: Additional information on mutated phosphosites. (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.c.3598151_d4
title: Additional file 8: of GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data

description: Scoring table comparing the results of the GSA package to those of GOexpress. A short description of the column headers in the ‘GSA positive results’ worksheet is provided in the ‘legend’ worksheet. (XLSX 78 kb)
DOI: 10.6084/m9.figshare.c.3598157_d1
title: Additional file 2: of Post-traumatic stress disorder associated with life-threatening motor vehicle collisions in the WHO World Mental Health Surveys

description: Study Institutional Review Boards and Consent Features across WMH Survey Initiative. Names of study Institutional Review Boards and features of consent across the WMH Survey Initiative. (XLS 24 kb)
DOI: 10.6084/m9.figshare.c.3598136_d8
title: Additional file 9: of Untargeted metabolomics unravels functionalities of phosphorylation sites in Saccharomyces cerevisiae

description: List of oligonucleotides used in this study. (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.c.3598151_d5
title: Additional file 5: of GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data

description: Scoring table for gene features produced by GOexpress using the ExpressionSet described in the paper (see Additional file 1). (XLSX 622Â kb)
DOI: 10.6084/m9.figshare.c.3598136_d9
title: Additional file 4: of Untargeted metabolomics unravels functionalities of phosphorylation sites in Saccharomyces cerevisiae

description: Results from pathway enrichment analysis. (XLSX 69Â kb)
DOI: 10.6084/m9.figshare.c.3598136_d10
title: Additional file 7: of Untargeted metabolomics unravels functionalities of phosphorylation sites in Saccharomyces cerevisiae

description: Log 2 fold changes from untargeted metabolomics. (XLSX 1220Â kb)
DOI: 10.6084/m9.figshare.c.3598151_d6
title: Additional file 1: of GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data

description: Script used to perform the analysis shown in the paper. The script includes preparation of local gene and GO annotations, the main analysis, the computation of permutation-based P-values, the filtering of GO terms, and the various visualisation functions at both gene and GO levels. (R 4Â kb)
DOI: 10.6084/m9.figshare.c.3598151_d8
title: Additional file 2: of GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data

description: Package source code for GOexpress release 1.2.1. (GZ 2281Â kb)
DOI: 10.6084/m9.figshare.c.3598181_d9
title: Additional file 5 of Discrete distributional differential expression (D3E) - a tool for gene expression analysis of single-cell RNA-seq data

description: Parameters for the Islam et al. data with degradation rates. Parameters for the 2,105 genes that were expressed in both cell types, and where degradation rates were available. (TSV 369 kb)
DOI: 10.15468/dl.52s9tw
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Peperomia bradei Yunck."
 ]
}

 The dataset includes 6 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032383-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ydshk
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Octopus sinensis d'Orbigny, 1834",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032385-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598307_d1
title: Additional file 1: of An optimised method for the proteomic profiling of full thickness human skin

description: Table detailing the proteins identifed in the original method (Fig. 1).Â (XLSX 19Â kb)
DOI: 10.5066/p97w00rm
title: Stable isotope, seep megafauna video analysis, and macrofauna of submarine canyons, deep-sea corals and seep habitats in the western Atlantic from 2018-2019

description: Datasets of the sediment grain size and geochemistry, macrofaunal communities, stable isotope (carbon, nitrogen, sulfur) and seep video analyses associated with deep-sea corals, submarine canyons and seep habitats in the western Atlantic off the U.S. eastern coastline from 2018-2019.
DOI: 10.6084/m9.figshare.c.3598307_d2
title: Additional file 2: of An optimised method for the proteomic profiling of full thickness human skin

description: Table detailing the proteins identified in the final method (Fig. 2).Â (XLSX 120Â kb)
DOI: 10.6084/m9.figshare.c.3598325_d4
title: Additional file 1: of Monoamine oxidase B gene variants associated with attention deficit hyperactivity disorder in the Indo-Caucasoid population from West Bengal

description: Details of the MAOB variants investigated. Description: The table summarizes details of the MAOB variants investigated. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3598358_d1
title: Additional file 3 of De novo transcriptome reconstruction and annotation of the Egyptian rousette bat

description: Sequences used in Additional file 2 . Information on sequences used in Additional file 1 is described. (XLS 25 kb)
DOI: 10.6084/m9.figshare.c.3598325_d5
title: Additional file 6: of Monoamine oxidase B gene variants associated with attention deficit hyperactivity disorder in the Indo-Caucasoid population from West Bengal

description: Pairwise Linkage Disequilibrium pattern of MAOB variants (analyzed using Haploview 4.2). Description: The table summarizes the Dâ   and r 2 values for pairwise LD analysis in ADHD probands and ethnically matched controls. (XLSX 11 kb)