cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14447121
title: Stomach contents of Speleomantes hybrids

description: The dataset collects ecological and morphological information on <i>Speleomantes </i>(<i>Hydromantes</i>) hybrids from their natural range, and from caves where they were introduced. The dataset contains information on: snout-vent length, total length, weight and stomach contents of each captured salamander. Salamanders' identity was coded to identify recapture individuals; individuals recognition was performed observing their dorsal pattern.<br>The dataset includes: ID (the salamander’s database code), Site (“Cave"), Latitude and longitude (low resolution coordinates of the site), Population (the population code), Region and Province (the relevant information for each site), Month and Year (the period in which the salamander was captured), Season (Winter, Spring, Summer, Autumn), Species (the species to which the individual belongs), Tag (the unique code identifying each individual), Sex (male (M), female (F), juvenile (J)), Eggs (indicates whether eggs where visible from the salamander’s belly (yes/no)), SVL (estimated snout-vent length (mm)), TL (estimated total length (mm)),Weight (indicates the salamander’s weight (g)), Condition (indicates if stomach was empty (1) or not (0)), Not_identifiable (Indicates whether stomach contents were identifiable (0) or not (1) at the order level), Prey typology (for each prey typology the total number of recognized items is reported). NA means not available information.<br>
DOI: 10.6084/m9.figshare.14447121.v1
title: Stomach contents of Speleomantes hybrids

description: The dataset collects ecological and morphological information on <i>Speleomantes </i>(<i>Hydromantes</i>) hybrids from their natural range, and from caves where they were introduced. The dataset contains information on: snout-vent length, total length, weight and stomach contents of each captured salamander. Salamanders' identity was coded to identify recapture individuals; individuals recognition was performed observing their dorsal pattern.<br>The dataset includes: ID (the salamander’s database code), Site (“Cave"), Latitude and longitude (low resolution coordinates of the site), Population (the population code), Region and Province (the relevant information for each site), Month and Year (the period in which the salamander was captured), Season (Winter, Spring, Summer, Autumn), Species (the species to which the individual belongs), Tag (the unique code identifying each individual), Sex (male (M), female (F), juvenile (J)), Eggs (indicates whether eggs where visible from the salamander’s belly (yes/no)), SVL (estimated snout-vent length (mm)), TL (estimated total length (mm)),Weight (indicates the salamander’s weight (g)), Condition (indicates if stomach was empty (1) or not (0)), Not_identifiable (Indicates whether stomach contents were identifiable (0) or not (1) at the order level), Prey typology (for each prey typology the total number of recognized items is reported). NA means not available information.<br>
DOI: 10.25345/c5hk01
title: MassIVE MSV000088041 - DOM-Interlab-LCMS-2021 - lab33
title: Interlab study of marine dissolved organic matter and algal extracts 2021.lab.33
DOI: 10.6084/m9.figshare.16553685
title: AR049-MicroCAT-CTD

description: This dataset provides 12 months worth of MicroCAT-CTD data received at ADEON's 7 bottom-lander collection sites. A readme file is included. Recording dates span November 2019 through November 2020<br>See https://adeon.unh.edu/ for more details.
DOI: 10.6084/m9.figshare.16553685.v1
title: AR049-MicroCAT-CTD

description: This dataset provides 12 months worth of MicroCAT-CTD data received at ADEON's 7 bottom-lander collection sites. A readme file is included. Recording dates span November 2019 through November 2020<br>See https://adeon.unh.edu/ for more details.
DOI: 10.25387/g3.15130656
title: Supplemental Material for Tromp, et al., 2021

description: Supplemental material S04 and S07 for manuscript G3-2021-402770.Annotated neurexin sequences (snapgene file extension) as well as sequencing data and alignment analysis.
DOI: 10.5281/zenodo.5221007
title: single-component vs multi-component treatment of dyslexia

description: Raw data with pre-intervention and post-intervention reading and reading-related scores of two groups of children, treated with single-component (VHSS or AVG) versus multi-component treatment (VHSS + AVG).. All variables starting with "a" refer to pre-test, all scores starting with "b" refer to post-test, all variables starting with "d" are difference-scores (post-test minus pre-test)
DOI: 10.5281/zenodo.5221006
title: single-component vs multi-component treatment of dyslexia

description: Raw data with pre-intervention and post-intervention reading and reading-related scores of two groups of children, treated with single-component (VHSS or AVG) versus multi-component treatment (VHSS + AVG).. All variables starting with "a" refer to pre-test, all scores starting with "b" refer to post-test, all variables starting with "d" are difference-scores (post-test minus pre-test)
DOI: 10.6084/m9.figshare.6505847
title: Daughters of the budding yeast from old mothers have shorter replicative lifespans but not total lifespans. Are DNA damage and rDNA instability the factors that determine longevity?

description: Although a lot of effort has been put into the search for factors responsible for aging in yeast mother cells, our knowledge of cellular changes in daughter cells originating from old mothers is still very limited. It has been shown that an old mother is not able to compensate for all negative changes within its cell and therefore transfers them to the bud. In this paper, we show for the first time that daughter cells of an old mother have a reset lifespan expressed in units of time despite drastic reduction of their budding lifespan, which suggests that a single yeast cell has a fixed programmed longevity regardless of the time point at which it was originated. Moreover, in our study we found that longevity parameters are not correlated with the rDNA level, DNA damage, chromosome structure or aging parameters (budding lifespan and total lifespan).
DOI: 10.6084/m9.figshare.6505847.v2
title: Daughters of the budding yeast from old mothers have shorter replicative lifespans but not total lifespans. Are DNA damage and rDNA instability the factors that determine longevity?

description: Although a lot of effort has been put into the search for factors responsible for aging in yeast mother cells, our knowledge of cellular changes in daughter cells originating from old mothers is still very limited. It has been shown that an old mother is not able to compensate for all negative changes within its cell and therefore transfers them to the bud. In this paper, we show for the first time that daughter cells of an old mother have a reset lifespan expressed in units of time despite drastic reduction of their budding lifespan, which suggests that a single yeast cell has a fixed programmed longevity regardless of the time point at which it was originated. Moreover, in our study we found that longevity parameters are not correlated with the rDNA level, DNA damage, chromosome structure or aging parameters (budding lifespan and total lifespan).
DOI: 10.6084/m9.figshare.6505847.v1
title: Daughters of the budding yeast from old mothers have shorter replicative lifespans but not total lifespans. Are DNA damage and rDNA instability the factors that determine longevity?

description: Although a lot of effort has been put into the search for factors responsible for aging in yeast mother cells, our knowledge of cellular changes in daughter cells originating from old mothers is still very limited. It has been shown that an old mother is not able to compensate for all negative changes within its cell and therefore transfers them to the bud. In this paper, we show for the first time that daughter cells of an old mother have a reset lifespan expressed in units of time despite drastic reduction of their budding lifespan, which suggests that a single yeast cell has a fixed programmed longevity regardless of the time point at which it was originated. Moreover, in our study we found that longevity parameters are not correlated with the rDNA level, DNA damage, chromosome structure or aging parameters (budding lifespan and total lifespan).
DOI: 10.6084/m9.figshare.16553751
title: scvi-citeseq.h5ad

description: H5AD file created by following the scvi-tools totalVI tutorial
DOI: 10.5281/zenodo.5348368
title: InSAR Displacements in the Delaware Basin, TX

description: These data are the vertical and east-west horizontal cumulative displacements in the Delaware Basin, between 2015-03-05 through 2020-03-31. They are presented in "Shallow Aseismic Slip in the Delaware Basin Determined by Sentinel-1 InSAR", submitted to <em>JGR: Solid Earth</em> on September 1st, 2021. The format of both files is [longitude, latitude, X, Y, displacement (cm)]. For vertical displacements, negative values indicate subsidence and positive values indicate uplift. For horizontal displacement, negative values indicate westward displacement, and positive values indicate eastward displacement.
description: please contact Karissa Pepin (karissa.pepin@gmail.com) with any questions pertaining to this dataset
DOI: 10.5281/zenodo.5359729
title: Imprint of planet formation in the deep interior of the Sun

description: In protoplanetary disks, the growth and inward drift of dust lead to the generation of a temporal ``pebble wave'' of increased metallicity. This phase must be followed by a phase in which the exhaustion of the pebbles in the disk and the formation of planets lead to the accretion of metal-poor gas. At the same time, disk winds may lead to the selective removal of hydrogen and helium from the disk. Hence, stars grow by accreting gas that has an evolving composition. In this work, we investigated how the formation of the Solar System may have affected the composition and structure of the Sun, and whether it plays any role in solving the so-called solar-abundance problem, that is, the fact that standard models with up-to-date lower-metallicity abundances reproduce helioseismic constraints significantly more poorly than those with old higher-metallicity abundances. We simulated the evolution of the Sun from the protostellar phase to the present age and attempted to reproduce spectroscopic and helioseismic constraints. We performed chi-squared tests to optimize our input parameters, which we extended by adding secondary parameters. These additional parameters accounted for the variations in the composition of the accreted material and an increase in the opacities. We confirmed that, for realistic models, planet formation occurs when the solar convective zone is still massive; thus, the overall changes due to planet formation are too small to significantly improve the chi-square fits. We found that solar models with up-to-date abundances require an opacity increase of 12% to 18% centered at T = 10^6.4 K to reproduce the available observational constraints. This is slightly higher than, but is qualitatively in good agreement with, recent measurements of higher Fe opacities. These models result in better fits to the observations than those using old abundances; therefore, they are a promising solution to the solar abundance problem. Using these improved models, we found that planet formation processes leave a small imprint in the solar core, whose metallicity is enhanced by up to 5%. This result can be tested by accurately measuring the solar neutrino flux. In the improved models, the protosolar molecular cloud core is characterized by a primordial metallicity in the range Zproto = 0.0127-0.0157 and a helium mass fraction in the range Yproto = 0.268-0.274.
description: Supplemental materials of Kunitomo & Guillot (2021), A&A. The stellar evolution code MESA version 12115 was used.
DOI: 10.5281/zenodo.5242894
title: CEM2D_Dataset

description: Dataset used for the paper 'The Coastline Evolution Model 2D (CEM2D) V1.1'. https://doi.org/10.5194/gmd-14-1-2021
DOI: 10.6084/m9.figshare.16550319.v1
title: ZOO_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550316.v1
title: GERM_2.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550322
title: GERM_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550322.v1
title: GERM_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550325
title: ZOO_4.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550319
title: ZOO_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550316
title: GERM_2.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550331
title: ZOO_3.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550334
title: DEV_4.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550334.v1
title: DEV_4.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550328.v1
title: ZOO_2.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550328
title: ZOO_2.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550337
title: MAT_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550337.v1
title: MAT_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550349
title: ZOO_5.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550340
title: DEV_2.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550346
title: IMM_4.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550346.v1
title: IMM_4.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550343
title: DEV_5.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550340.v1
title: DEV_2.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550343.v1
title: DEV_5.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550358.v1
title: GERM_5.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550358
title: GERM_5.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550364
title: DEV_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550364.v1
title: DEV_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550361.v1
title: IMM_5.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550352
title: IMM_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550355.v1
title: IMM_3.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550352.v1
title: IMM_1.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550355
title: IMM_3.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550370
title: GERM_4.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550361
title: IMM_5.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550370.v1
title: GERM_4.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550367
title: IMM_2.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550367.v1
title: IMM_2.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550373
title: GERM_3.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550373.v1
title: GERM_3.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550376.v1
title: DEV_3.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.6084/m9.figshare.16550376
title: DEV_3.tif

description: SBF-SEM dataset of corresponding chytrid life stage
DOI: 10.25345/c5cv76
title: MassIVE MSV000088042 - MetaCardis_Study_Serum_Metabolomics_GCMS
title: MetaCardis: EU-funded investigation into effects of gut microbiota in cardiometabolic diseases http://www.metacardis.net/
DOI: 10.5281/zenodo.5336200
title: Effect of fluctuating temperatures on development, reproduction and energy of oriental armyworm populations, Mythimna separata

description: The larval period,pupal period, reproductive performances and triglyceride content of <em>M. separata</em> populations treated with different temperature regimens
DOI: 10.21223/yt4uzu
title: Dataset for: Genome wide asociation study (GWAS) to identify favourable alleles for late blight resistance in core collection

description: The assessment of late blight resistance in accessions of the CIP core collection and the European potato collection during two consecutive rainy seasons under field conditions with high endemic disease pressure located in Oxapampa (1810 masl Pasco-Perú) were conducted. Randomized complete block design (RBDC) with three replications of 8 hill plots which were adjusted to a row-column design in the first season and second season using row-column design with three replications of 5 hill plots were established. After 40 days after planting (DAP), the percentage of leaf area affected by late blight infection was recorded by plot throughout the season to subsequently compute the area under the disease progress curve (AUDPC). AUDPC values are used to compute the predicted susceptibility scale value of any candidate genotype within a scale where increasing numbers represent increasing susceptibility.
DOI: 10.6084/m9.figshare.9164315.v2
title: Circadian oscillations persist in low malignancy breast cancer cells

description: Epidemiological studies have shown that humans with altered circadian rhythms have higher cancer incidence, with breast cancer being one of the most cited examples. To uncover how circadian disruptions may be correlated with breast cancer and its development, prior studies have assessed the expression of <i>BMAL1</i> and <i>PER2</i> core clock genes via RT-qPCR and western blot analyses. These and our own low-resolution data show that <i>BMAL1</i> and <i>PER2</i> expression are suppressed and arrhythmic. We hypothesized that oscillations persist in breast cancer cells, but due to limitations of protocols utilized, cannot be observed. This is especially true where dynamic changes may be subtle. In the present work, we generated luciferase reporter cell lines representing high- and low-grade breast cancers to assess circadian rhythms. We tracked signals for <i>BMAL1</i> and <i>PER2</i> to determine whether and to what extent oscillations exist and provide initial correlations of circadian rhythm alterations with breast cancer aggression. In contrast to previous studies, where no oscillations were apparent in any breast cancer cell line, our luminometry data reveal that circadian oscillations of <i>BMAL1</i> and <i>PER2</i> in fact exist in the low-grade, luminal A MCF7 cells but are not present in high-grade, basal MDA-MB-231 cells. To our knowledge, this is the first evidence of core circadian clock oscillations in breast cancer cells. This work also suggests that circadian rhythms are further disrupted in more aggressive/high tumor grades of breast cancer, and that use of real time luminometry to study additional representatives of breast and other cancer subtypes is merited.
DOI: 10.21223/1vgwmo
title: Dataset for: True potato seed from bacterial wilt resistance incorporated into CIP advanced clones

description: True potato seed inventory for 68 new families carrying novel variation of bacteria wilt resistance and heat tolerance combining genes from the cultivated S. tuberosum group phureja and wild S. chacoense and S. raphanifolium species used to develop CIP’s ancient, BW-resistant pre-breeding clones and from S. commersonii–derived pre-breeding clones developed by INIA–Uruguay wild potato genotypes incorporated into CIP breeding pipeline.
DOI: 10.7925/drs1.duchas_5081687
title: Ainmneacha na bPáirceanna

description: Story collected by Joseph Halligan, a student at Belpatrick, Collon school (Belpatrick, Co. Louth) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Bean Uí Dhonnagáin.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_4953149
title: Hurling and Football Matches

description: Story collected by John Walsh, a student at The Rower (B.), Inistioge school (The Rower, Co. Kilkenny) from informant Honor Walsh.
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Risteárd Ó Cuirrín.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_4953150
title: Old Story

description: Story collected by Patrick Galavan, a student at The Rower (B.), Inistioge school (The Rower, Co. Kilkenny) from informant Bridget Doran.
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Risteárd Ó Cuirrín.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5081697
title: Ainmneacha na bPáirceanna

description: Story collected by Michael Quinn, a student at Belpatrick, Collon school (Belpatrick, Co. Louth) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Bean Uí Dhonnagáin.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_4953151
title: Old Story

description: Story collected by John Walsh, a student at The Rower (B.), Inistioge school (The Rower, Co. Kilkenny) from informant Honor Walsh.
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Risteárd Ó Cuirrín.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5081699
title: Ainmneacha na bPáirceanna

description: Story collected by James Smyth, a student at Belpatrick, Collon school (Belpatrick, Co. Louth) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Bean Uí Dhonnagáin.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.