cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.d9zrsn
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Material sample, Specimen, Occurrence evidence)",
 "Geometry POLYGON((77.78616 37.06475,75.21304 37.81383,72.21961 37.52877,71.35612 35.32354,73.15139 34.29079,74.1152 33.20319,75.49208 31.69277,77.18565 30.32191,77.89779 30.284,80.51769 28.35562,83.64101 27.06572,85.95637 26.52277,88.60239 26.20064,90.50008 26.3995,92.5654 26.89176,94.35534 27.74806,95.73222 27.68712,97.435 27.724,97.1373 30.55035,93.33106 30.46034,84.85424 30.1009,80.16766 32.41952,79.45321 36.15674,77.78616 37.06475))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Nanorana liebigii (Günther, 1860)",
 "Year 2001-2022"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0255343-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ht8t93
title: Occurrence Download

description: A dataset containing 18271 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oenothera parviflora L."
 ]
}

 The dataset includes 18271 records from 311 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041794-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kkxtgs
title: Occurrence Download

description: A dataset containing 552 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Seseli gummiferum Pall. ex Sm.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 552 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081526-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.syebwz
title: Occurrence Download

description: A dataset containing 246 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Seseli pallasii Besser",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 246 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081513-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7y65jq
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Seseli leucospermum Waldst. & Kit.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 22 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081524-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkrtbe
title: Occurrence Download

description: A dataset containing 42369 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psittacula eupatria (Linnaeus, 1766)"
 ]
}

 The dataset includes 42369 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0143058-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cy48h7
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Seseli gracile Waldst. & Kit.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 18 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081529-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qfxbcb
title: Occurrence Download

description: A dataset containing 293 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sceloporus palaciosi Lara-Gongora, 1983"
 ]
}

 The dataset includes 293 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081528-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ypdqhd
title: Occurrence Download

description: A dataset containing 1436 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dryopteris mindshelkensis Pavlov",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1436 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081565-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d925dc
title: Occurrence Download

description: A dataset containing 1214 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dysphania multifida (L.) Mosyakin & Clemants",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1214 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081584-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vwpfc9
title: Occurrence Download

description: A dataset containing 2097 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Seseli longifolium L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2097 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081520-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3dgz0x
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drosophila serrata Malloch, 1927"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045382-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ytmf2e
title: Occurrence Download

description: A dataset containing 320 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 14.8430590430143",
 "DecimalLongitude is less than 14.8461185961987",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 320 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017471-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnt8jc
title: Occurrence Download

description: A dataset containing 231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Seseli dichotomum Pall.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 231 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081532-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q4cc7c
title: Occurrence Download

description: A dataset containing 179940 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euodice malabarica (Linnaeus, 1758)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 179940 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002932-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.735hw4
title: Occurrence Download

description: A dataset containing 9749 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sequoiadendron giganteum (Lindl.) J.T.Buchholz",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9749 records from 200 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081570-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2fgwje
title: Occurrence Download

description: A dataset containing 53263 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dryopteris expansa (C.Presl) Fraser-Jenk. & Jermy",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 53263 records from 452 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081538-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eyh23d
title: Occurrence Download

description: A dataset containing 921 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Tapirus bairdii (Gill, 1865)"
 ]
}

 The dataset includes 921 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095691-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvv3hm
title: Occurrence Download

description: A dataset containing 858 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Serapias bergonii E.G.Camus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 858 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081568-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.82f4n3
title: Occurrence Download

description: A dataset containing 5797 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sesamoides purpurascens (L.) G.López",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5797 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081545-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wqg8qk
title: Occurrence Download

description: A dataset containing 11589 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna obtusifolia (L.) H.S.Irwin & Barneby",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11589 records from 405 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081575-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14497780
title: Table 9: NVivo Code Book

description: Table 9: NVivo Code Book lists the identified codes and a short description. Codes were developed as categories, sub-categories, and, in some instances, sub-subcategories.
DOI: 10.5281/zenodo.14497781
title: Table 9: NVivo Code Book

description: Table 9: NVivo Code Book lists the identified codes and a short description. Codes were developed as categories, sub-categories, and, in some instances, sub-subcategories.
DOI: 10.5284/1124640
title: Images from Descriptive Building Recording Work at The Bolt, Salcombe, Devon, October 2023

description: This collection comprises images from Descriptive Building Recording work (Level 2) at The Bolt, Salcombe, Devon. The work was undertaken by AC Archaeology Ltd in October 2023.
DOI: 10.5281/zenodo.14194953
title: Genome, repeat, and functional annotation associated with the naked mole-rat genome assembly, mHetGlaV3 (GCA_964261345.1)

description: The naked mole-rat (NMR; Heterocephalus glaber) is a eusocial subterranean rodent with a highly unusual set of physiological traits, such as extreme longevity, that has attracted great interest amongst the scientific community. However, the genetic basis of most of these traits has not been elucidated. To facilitate our understanding of the molecular mechanisms underlying NMR physiology and behaviour, we generated a long-read chromosomal-level genome assembly of the NMR. This genome, mHetGlaV2, was subsequently annotated and incorporated into a “91 eutherian mammals” multiple whole genome alignment in Ensembl. 

We identified intra-chromosomal misassemblies within mHetGlaV2. We fixed these misassemblies by comparing syntenic blocks between this assembly and the Canadian Porcupine (EreDor) genome assembly (https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_028451465.1/) and a FISH-Karyotype of the naked mole-rat completed by Romanenko et al., 2023 (PMID: 380307020) to address any misassemblies and place centromeres. Chromosome numbering was identified from a composite karyogram of karyotypes from over 350 cells. This scaffold-corrected assembly is labelled mHetGlaV3 (https://www.ebi.ac.uk/ena/browser/view/GCA_964261345.1).

This repository stores the repeat, genome, and epigenome annotations for HetGlaV3.

mHetGlaV3.primary.gtf.gz. Gene structures and gene symbols are transferred from ENSEMBL annotations of mHetGlaV2 using liftOff with default parameters. Additional gene symbols were identified using TOGA and manual curation.

mHetGlaV3.primary.gtf.gz. Simple repetitive regions and transposable elements were annotated using EarlGrey (https://github.com/TobyBaril/EarlGrey) using "Rodentia" annotations for RepeatMasker.

mHetGlaV3.primary.genesymbol_table.txt.txt.gz. A tab-delimited file where rows are gene IDs and columns are gene symbols generated with each method. "Consensus" shows the best matching gene symbol for each gene ID.

mHetGlaV3.primary_annotated_blacklist.bed.gz. Provides an assembly "blacklist" for mHetGlaV3. This blacklist is a bed file annotating assembly breakpoints between HetGlaV2 and HetGlaV3. This blacklist contains additional columns (e.g., closest gene, overlapping TE etc.) and should therefore be filtered to the first column before being incorporated into traditional genomic pipelines.

mHetGlaV3.primary_hypothalamus_ABC_enhancer.bedpe.gz. Activity-By-Contact enhancers (https://github.com/broadinstitute/ABC-Enhancer-Gene-Prediction) generated in the female subordinate naked mole-rat hypothalamus using Hi-C-seq, ChIP-seq of H3K27Ac data, ATAC-seq, and RNA-seq information.

mHetGlaV3.primary_hypothalamus_chromHMM.bed.gz. Chromatin states (using Chromhmm) annotating the female subordinate naked mole-rat hypothalamus using H3K4me3 (promoter), H4K4me2 (promoter-enhancer), H3K27Ac (active enhancer), H3K36me3 (elongated), H3K27me3 (polycomb repressed), H3K9me3 (heterochromatin), and CTCF (whole brain) ChIP-seq data, as well as ATAC-seq and RNA-seq data.
DOI: 10.17605/osf.io/9e5jp
title: Risk factors for myocardial ischemia and early mortality in infants with Pulmonary Atresia with Intact Ventricular Septum: a scoping review

description: Infant mortality for Pulmonary Atresia with Intact Ventricular Septum (PAIVS) remains high (up to 20-30%), often in relation to development of myocardial ischemia in the presence of a diminutive right ventricle (RV) and single ventricle physiology. Although coronary artery anatomy is recognized as a major predictor of poor outcomes, its predictive value varies widely among studies and does not comprehensively determine mortality risk. 

This scoping review aims to characterize the breadth and strength of association between anatomical and pathophysiological risk factors and myocardial ischemia, use of mechanical circulatory support, and early mortality in infants with Pulmonary Atresia with Intact Ventricular Septum (PAIVS).
DOI: 10.5281/zenodo.14497789
title: Table 10: How Text Segments (codes) Were Mapped

description: Table 10: How Text Segments (codes) Were Mapped illustrates a sample of participant quotes and how each was mapped to various logics.
DOI: 10.5281/zenodo.14497790
title: Table 10: How Text Segments (codes) Were Mapped

description: Table 10: How Text Segments (codes) Were Mapped illustrates a sample of participant quotes and how each was mapped to various logics.
DOI: 10.25345/c5jd4q19m
title: MassIVE MSV000096666 - Quantifying the ~75-95% of Peptides in DIA-MS Datasets that were not Previously Quantified
title: File for "Quantifying the ~75-95% of Peptides in DIA-MS Datasets that were not Previously Quantified" paper
DOI: 10.5281/zenodo.14497772
title: Spatial and Temporal Distribution of CO2 and Thermal  Comfort Conditions in a Day Care Center

description: Finding the balance between CO2 concentration and thermal comfort is very important during the heating season in a daycare classroom due to the impact it has on children’s health. Air treatment systems together with outdoor hygrothermal conditions are decisive in finding this balance. The objective of this work is to evaluate the impact that three air treatment systems, ventilation, conditioning, and air cleaning, have on thermal comfort and CO2 concentration in the two breathing planes defined by the occupants of a daycare classroom. Eight experimental tests were carried out, using different combinations of air systems. Temperature, relative humidity, and CO2 concentration are measured at eight points in the classroom: four in the children’s breathing plane (0.75 m) and the other four in that of an adult (1.7 m). The results show, on the one hand, that the ventilation or conditioning systems improve the indoor CO2 concentration in the two planes, equalizing it in the two planes and, on the other hand, that the sensation of cold is greater in the children’s breathing plane than in the adult’s breathing plane in all the experimental tests studied
DOI: 10.5281/zenodo.14497773
title: Spatial and Temporal Distribution of CO2 and Thermal  Comfort Conditions in a Day Care Center

description: Finding the balance between CO2 concentration and thermal comfort is very important during the heating season in a daycare classroom due to the impact it has on children’s health. Air treatment systems together with outdoor hygrothermal conditions are decisive in finding this balance. The objective of this work is to evaluate the impact that three air treatment systems, ventilation, conditioning, and air cleaning, have on thermal comfort and CO2 concentration in the two breathing planes defined by the occupants of a daycare classroom. Eight experimental tests were carried out, using different combinations of air systems. Temperature, relative humidity, and CO2 concentration are measured at eight points in the classroom: four in the children’s breathing plane (0.75 m) and the other four in that of an adult (1.7 m). The results show, on the one hand, that the ventilation or conditioning systems improve the indoor CO2 concentration in the two planes, equalizing it in the two planes and, on the other hand, that the sensation of cold is greater in the children’s breathing plane than in the adult’s breathing plane in all the experimental tests studied
DOI: 10.15468/dl.djy7m2
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glossogobius ankaranensis Banister, 1994"
 ]
}

 The dataset includes 17 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035319-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wtfymb
title: Occurrence Download

description: A dataset listing the 90377 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Observation.org, Nature data from around the World"
 ]
}

 The dataset's 90377 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035318-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5284/1124666
title: Images from Historic Building Recording Work along Roadside Wall, Shutta Road, Looe, Cornwall, September 2023

description: This collection comprises images from Historic Building Recording work along the roadside wall at Shutta Road, Looe, Cornwall following repair and rebuilding works. The work was undertaken by Cornwall Archaeological Unit in September 2023.
DOI: 10.6084/m9.figshare.28030421
title: Dataset.dta

description: This cross-sectional study used data from 28,096 non-agricultural workers from the Sixth Ecuadorian Living Conditions Survey (2013/14). Employment profiles were categorized as dependent formal (reference), independent formal, dependent informal, and independent informal. Depressive symptoms were assessed using the Center for Epidemiologic Studies Depression Scale. Adjusted prevalence ratios (PRa) for the association between employment profiles and depressive symptoms were calculated using Poisson regression models with robust variance. All analyses were performed using Stata v.17.
DOI: 10.6084/m9.figshare.28030421.v1
title: Dataset.dta

description: This cross-sectional study used data from 28,096 non-agricultural workers from the Sixth Ecuadorian Living Conditions Survey (2013/14). Employment profiles were categorized as dependent formal (reference), independent formal, dependent informal, and independent informal. Depressive symptoms were assessed using the Center for Epidemiologic Studies Depression Scale. Adjusted prevalence ratios (PRa) for the association between employment profiles and depressive symptoms were calculated using Poisson regression models with robust variance. All analyses were performed using Stata v.17.
DOI: 10.6084/m9.figshare.28030427
title: Metabolite BridgeDb ID Mapping Database (20241215)

description: BridgeDb ID mapping database for metabolites, using HMDB 5.0 (Release of April 2024), ChEBI (Release of December 2024), and Wikidata (15 December 2024) as data sources.