cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.p3squu
title: Occurrence Download

description: A dataset containing 1867 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Herpsilochmus sellowi B.M.Whitney & Pacheco, 2000"
 ]
}

 The dataset includes 1867 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010777-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.etvwwk
title: Occurrence Download

description: A dataset containing 728 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ambystoma mexicanum (Shaw & Nodder, 1798)"
 ]
}

 The dataset includes 728 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0201291-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3x6r4
title: Occurrence Download

description: A dataset containing 1075 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Conopophaga cearae Cory, 1916"
 ]
}

 The dataset includes 1075 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010783-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w9w7dx
title: Occurrence Download

description: A dataset containing 239 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gomphrena graminea Moq."
 ]
}

 The dataset includes 239 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032285-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vcuyba
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Hemitragus jemlahicus (C.H.Smith, 1826)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0156897-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mpzjaf
title: Occurrence Download

description: A dataset containing 3625 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "GadmGid is one of (GBR.1_1, GBR.3_1, GBR.4_1)",
 "TaxonKey is Bryoria fuscescens (Gyeln.) Brodo & D.Hawksw."
 ]
}

 The dataset includes 3625 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015026-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.234tpp
title: Occurrence Download

description: A dataset containing 22706 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-119.0918 33.57801,-124.18945 31.80289,-112.06055 22.26876,-123.66211 15.11455,-116.63086 7.1881,-104.67773 17.30869,-97.11914 14.43468,-94.48242 14.60485,-92.37305 12.89749,-88.68164 16.13026,-85.86914 19.80805,-85.69336 22.59373,-91.49414 22.106,-95.00977 19.97335,-95.36133 26.11599,-99.4043 30.14513,-105.38086 32.39852,-113.99414 33.57801,-119.0918 33.57801))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Orobanchaceae"
 ]
}

 The dataset includes 22706 records from 172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103703-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.upsztu
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynocephalus vlangalii var. pylzowi Bedriaga, 1909"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051144-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8vnhk6
title: Occurrence Download

description: A dataset containing 32416 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-119.0918 33.57801,-124.18945 31.80289,-112.06055 22.26876,-123.66211 15.11455,-116.63086 7.1881,-104.67773 17.30869,-97.11914 14.43468,-94.48242 14.60485,-92.37305 12.89749,-88.68164 16.13026,-85.86914 19.80805,-85.69336 22.59373,-91.49414 22.106,-95.00977 19.97335,-95.36133 26.11599,-99.4043 30.14513,-105.38086 32.39852,-113.99414 33.57801,-119.0918 33.57801))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cucurbitaceae"
 ]
}

 The dataset includes 32416 records from 206 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103714-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mazpwn
title: Occurrence Download

description: A dataset containing 1640 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lindsaea ensifolia Sw.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 1640 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051145-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vp9ncz
title: Occurrence Download

description: A dataset containing 3365 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "IsInCluster is false",
 "OccurrenceStatus is Present",
 {
 "or" : [
 "PublishingOrg is c3ad790a-d426-4ac1-8e32-da61f81f0117",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d"
 ]
 },
 "TaxonKey is Microstegium vimineum (Trin.) A.Camus",
 "Year 2006-2021"
 ]
}

 The dataset includes 3365 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222644-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.afp7q3
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Argyreia breviscapa (Kerr) Ooststr."
 ]
}

 The dataset includes 49 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015033-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ovo5c
title: Occurrence Download

description: A dataset containing 1617 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus montezumae Lamb."
 ]
}

 The dataset includes 1617 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051140-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rsxteg
title: Occurrence Download

description: A dataset containing 60991 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhizophoraceae"
 ]
}

 The dataset includes 60991 records from 503 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112695-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8h8wkd
title: Occurrence Download

description: A dataset containing 40258 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "CoordinateUncertaintyInMeters 0.0-99.0",
 "TaxonKey is Quercus petraea (Matt.) Liebl.",
 "Year 1980-2024"
 ]
}

 The dataset includes 40258 records from 158 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015070-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.759p5a
title: Occurrence Download

description: A dataset containing 6898 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tetraclita squamosa (Bruguière, 1789))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6898 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043610-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.teen3p
title: Occurrence Download

description: A dataset containing 6549 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Linum trigynum L.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 6549 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051147-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u5ab8f
title: Occurrence Download

description: A dataset containing 506 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Buxus sinica",
 "Year 1981-2022"
 ]
}

 The dataset includes 506 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003156-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7bg8v
title: Occurrence Download

description: A dataset containing 9830 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Camelus dromedarius"
 ]
}

 The dataset includes 9830 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003157-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16932079
title: Video recordings of two Cionas in the behavioral arena

description: /Volumes/Summary results/Rodolfo/Summary videos for analysis_ciona/additional_5-6
DOI: 10.5281/zenodo.16932080
title: Video recordings of two Cionas in the behavioral arena

description: /Volumes/Summary results/Rodolfo/Summary videos for analysis_ciona/additional_5-6
DOI: 10.5281/zenodo.17429141
title: GeneFlow Demo Dataset

description: This dataset contains GeneFlow processed version of three 10X Xenium samples that are publicly available on https://www.10xgenomics.com/datasets.



Human Skin Preview Data (Xenium Human Skin Gene Expression Panel), In Situ Gene Expression dataset analyzed using Xenium Onboard Analysis 1.6.0, 10x Genomics, (2023-09-19).

Human Skin Preview Data (Xenium Human Skin Gene Expression Panel with Custom Add-On), In Situ Gene Expression dataset analyzed using Xenium Onboard Analysis 1.7.0, 10x Genomics, (2023-12-08).

Preview Data: FFPE Human Skin Primary Dermal Melanoma with 5K Human Pan Tissue and Pathways Panel, In Situ Gene Expression dataset analyzed using Xenium Onboard Analysis 3.0.0, 10x Genomics, (2024-08-01).
DOI: 10.5281/zenodo.17429142
title: GeneFlow Demo Dataset

description: This dataset contains GeneFlow processed version of three 10X Xenium samples that are publicly available on https://www.10xgenomics.com/datasets.



Human Skin Preview Data (Xenium Human Skin Gene Expression Panel), In Situ Gene Expression dataset analyzed using Xenium Onboard Analysis 1.6.0, 10x Genomics, (2023-09-19).

Human Skin Preview Data (Xenium Human Skin Gene Expression Panel with Custom Add-On), In Situ Gene Expression dataset analyzed using Xenium Onboard Analysis 1.7.0, 10x Genomics, (2023-12-08).

Preview Data: FFPE Human Skin Primary Dermal Melanoma with 5K Human Pan Tissue and Pathways Panel, In Situ Gene Expression dataset analyzed using Xenium Onboard Analysis 3.0.0, 10x Genomics, (2024-08-01).
DOI: 10.15468/dl.cpr5tw
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Paulownia fortunei",
 "Year 1981-2022"
 ]
}

 The dataset includes 197 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003160-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16932208
title: Video recordings of two Cionas 2

description: /Volumes/Summary results/Rodolfo/Summary videos for analysis_ciona/additional_5-6
DOI: 10.5281/zenodo.16932209
title: Video recordings of two Cionas 2

description: /Volumes/Summary results/Rodolfo/Summary videos for analysis_ciona/additional_5-6
DOI: 10.5281/zenodo.16932284
title: Videor recordings of Ciona and Copepod 2
DOI: 10.5281/zenodo.16932285
title: Videor recordings of Ciona and Copepod 2
DOI: 10.15472/9yzeev
title: Insectos asociados al cultivo de aguacate Hass en Antioquia - Manejo integrado de plagas en aguacate

description: En este recurso se presentan 17 registros de especímenes de insectos observados en los municipios de La Ceja, Peñol y  Rionegro correspondientes al departamento de Antioquia entre febrero y marzo del 2016 y abril y mayo del 2017. Los especímenes se encuentran agrupados en el orden Coleoptera, familia Scarabaeidae.
DOI: 10.5281/zenodo.16932325
title: Video recordings of Ciona and Copepod

description: /Volumes/Summary results/Rodolfo/Summary videos for analysis_ciona/additional_5-6
DOI: 10.5281/zenodo.16932326
title: Video recordings of Ciona and Copepod

description: /Volumes/Summary results/Rodolfo/Summary videos for analysis_ciona/additional_5-6
DOI: 10.5281/zenodo.17457381
title: Appendices

description: Supplementary materials are available upon request through Zenodo’s restricted access system.
DOI: 10.5281/zenodo.17457382
title: Appendices

description: Supplementary materials are available upon request through Zenodo’s restricted access system.
DOI: 10.5281/zenodo.16932509
title: Video recordings of Ciona with copepod solution 1

description: /Volumes/Summary results/Rodolfo/Summary videos for analysis_ciona/additional_5-6
DOI: 10.5281/zenodo.16932510
title: Video recordings of Ciona with copepod solution 1

description: /Volumes/Summary results/Rodolfo/Summary videos for analysis_ciona/additional_5-6
DOI: 10.15468/dl.zwprcx
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation)",
 "Geometry POLYGON((-100.07892 18.2153,-97.81736 18.2153,-97.81736 20.27292,-100.07892 20.27292,-100.07892 18.2153))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Colinus virginianus",
 "Year 1960-2025"
 ]
}

 The dataset includes 99 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003161-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48420/30422452
title: Am I still IL? Evolution of CdS Nanocrystals from Inorganic Ligand Exchange

description: Ligand exchange has become the standard route for modifying the surface chemistry of colloidal nanocrystals (NCs), providing a mechanism to tailor their optoelectronic properties, solubility, and chemical functionalization. This enables NCs to be deployed in myriad applications where the surface-solution interface is key to performance or process compatibility. Ligand-passivated surfaces are generally considered stable and chemically inert, with incoming ligands assumed to fully replace native ones. Here, we demonstrate that inorganic ligand shells on CdS NCs are dynamic, chemically evolving over time, with transformation pathways strongly dependent on ligand identity. This is evaluated for representative oxoanions (o-phosphoric acid), chalcogenides (Na₂Se, Se<sup>2-</sup>), and metal-chalcogenides (thiostannate). Using multinuclear (<sup>1</sup>H, <sup>13</sup>C, <sup>23</sup>Na, <sup>31</sup>P, <sup>113</sup>Cd, <sup>119</sup>Sn) solid-state NMR spectroscopy and electron microscopy, we show that: (i) surface-bound phosphates reorganize over time into cadmium phosphate domains, degrading NC quality; (ii) polyselenide ligands remain chemically stable, but their associated Na<sup>+</sup> counter-ions exhibit dynamics that may suppress charge transport; and (iii) partial oxidation of thiostannate ligands to SnO₂ occurs, along with surface reconstruction, which improves NC passivation. Across all systems studied, residual oleylamine is detected. These findings reveal that inorganic ligand exchange does not necessarily yield chemically uniform or stable surfaces. Instead, each ligand class exhibits distinct behavior, ranging from surface degradation (phosphates), to stable yet dynamic interfaces (selenides), to hydrophilic and partially oxidized surfaces (thiostannates). This challenges the static-surface model and positions multinuclear solid-state NMR spectroscopy as a key tool for designing future functional materials.
DOI: 10.48420/30422452.v1
title: Am I still IL? Evolution of CdS Nanocrystals from Inorganic Ligand Exchange

description: Ligand exchange has become the standard route for modifying the surface chemistry of colloidal nanocrystals (NCs), providing a mechanism to tailor their optoelectronic properties, solubility, and chemical functionalization. This enables NCs to be deployed in myriad applications where the surface-solution interface is key to performance or process compatibility. Ligand-passivated surfaces are generally considered stable and chemically inert, with incoming ligands assumed to fully replace native ones. Here, we demonstrate that inorganic ligand shells on CdS NCs are dynamic, chemically evolving over time, with transformation pathways strongly dependent on ligand identity. This is evaluated for representative oxoanions (o-phosphoric acid), chalcogenides (Na₂Se, Se<sup>2-</sup>), and metal-chalcogenides (thiostannate). Using multinuclear (<sup>1</sup>H, <sup>13</sup>C, <sup>23</sup>Na, <sup>31</sup>P, <sup>113</sup>Cd, <sup>119</sup>Sn) solid-state NMR spectroscopy and electron microscopy, we show that: (i) surface-bound phosphates reorganize over time into cadmium phosphate domains, degrading NC quality; (ii) polyselenide ligands remain chemically stable, but their associated Na<sup>+</sup> counter-ions exhibit dynamics that may suppress charge transport; and (iii) partial oxidation of thiostannate ligands to SnO₂ occurs, along with surface reconstruction, which improves NC passivation. Across all systems studied, residual oleylamine is detected. These findings reveal that inorganic ligand exchange does not necessarily yield chemically uniform or stable surfaces. Instead, each ligand class exhibits distinct behavior, ranging from surface degradation (phosphates), to stable yet dynamic interfaces (selenides), to hydrophilic and partially oxidized surfaces (thiostannates). This challenges the static-surface model and positions multinuclear solid-state NMR spectroscopy as a key tool for designing future functional materials.
DOI: 10.5281/zenodo.17458074
title: Supplementary Appendices for Stereological Dynamics of Testicular Development in the Domestic Cat (Felis silvestris catus): Quantitative and Graphical Data

description: These supplementary appendices provide the complete stereological and morphometric data supporting the manuscript “Stereological dynamics of testicular development in the domestic cat (Felis silvestris catus) and association with DHH signaling: volumetric and cellular patterns.”

Appendix A.1 includes graphical representations of age-dependent stereological dynamics of Leydig, Sertoli, and germ cells (Figure A1).

Appendix A.2 provides detailed numerical stereological estimators for all analyzed variables across age groups (Table A1). All data are presented as medians ± interquartile range (IQR) and analyzed using nonparametric tests (Kruskal–Wallis with Dunn’s post hoc). These materials ensure transparency and reproducibility of the stereological and morphometric analyses.
DOI: 10.5281/zenodo.17447718
title: A new four-layer nanocarrier for eliminating acute myeloid leukemia stem cells

description: This conceptual research proposes a novel nanocarrier-based targeted therapy for Acute Myelogenous Leukemia (AML). The designed nanoparticle consists of four main layers: a stealth PEG layer for immune evasion, a ligand layer targeting CD123 markers, a pH-sensitive PLGA layer for controlled release, and a drug-loaded core containing cytarabine. The approach aims to selectively reach leukemic stem cells (LSCs) while minimizing damage to healthy tissues. The proposed system is theoretical due to the unavailability of materials in Iraq but is designed for future experimental validation and collaboration.
DOI: 10.5281/zenodo.17447719
title: A new four-layer nanocarrier for eliminating acute myeloid leukemia stem cells

description: This conceptual research proposes a novel nanocarrier-based targeted therapy for Acute Myelogenous Leukemia (AML). The designed nanoparticle consists of four main layers: a stealth PEG layer for immune evasion, a ligand layer targeting CD123 markers, a pH-sensitive PLGA layer for controlled release, and a drug-loaded core containing cytarabine. The approach aims to selectively reach leukemic stem cells (LSCs) while minimizing damage to healthy tissues. The proposed system is theoretical due to the unavailability of materials in Iraq but is designed for future experimental validation and collaboration.
DOI: 10.15468/dl.mnyxzy
title: Occurrence Download

description: A dataset listing the 3 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen, Occurrence evidence)",
 "Country is South Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dasispermum suffruticosum"
 ]
}

 The dataset's 3 records were derived from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003146-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.