cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7841432.v1
title: Dataset for: Prioritized Concordance Index for Hierarchical Survival Outcomes

description: We propose an extension of Harrell's concordance (C) index to evaluate the prognostic utility of biomarkers for diseases with multiple measurable outcomes that can be prioritized. Our prioritized concordance index measures the probability that, given a random subject pair, the subject with the worst disease status as of a time $\tau$ has the higher predicted risk. Our prioritized concordance index uses the same approach as the win-ratio, by basing generalized pairwise comparisons on the most severe or clinically important comparable outcome. We use an inverse probability weighting technique to correct for study-specific censoring. Asymptotic properties are derived using U-statistic properties. We apply the prioritized concordance index to two types of disease processes with a rare primary outcome and a more common secondary outcome. Our simulation studies show that when a predictor is predictive of both outcomes, the new concordance index can gain efficiency and power in identifying true prognostic variables compared to using the primary outcome alone. Using the prioritized concordance index, we examine whether novel clinical measures can be useful in predicting risk of type II diabetes in patients with impaired glucose resistance whose disease status can also regress to normal glucose resistance. We also examine the discrimination ability of four published risk models among ever-smokers at risk of lung-cancer incidence and subsequent death.
DOI: 10.17632/sw65dntxgk
title: Health Coaching and Glycemic Control

description: This dataset represents research data that assessed the effect of adding health coaching on glycemic control in patients with type 2 diabetes. A randomised controlled study conducted in one of the hospitals in Indonesia. The intervention was adding health coaching to standard diabetes care and compared with standard care only. Outcome (HbA1c) was measured at baseline and 12 weeks. 134 patients participated divided into two groups, 66 were allocated to the intervention group and 68 to the standard care group as controls. 124 outcomes were measured at the end of the study.
DOI: 10.6084/m9.figshare.12533096.v1
title: Table S1Transcriptome-wide expression profiling of Sporothrix schenckii yeast and mycelial forms

description: Oligonucleotide primers used for RT-qPCR analysis and list of new genes, overlapping sense-antisense regions and cis-SAS gene pairs
DOI: 10.6084/m9.figshare.20670018.v1
title: Meshes of pores

description: stl files of cubic meshes of pores identified from FIB-SEM tomography scans
DOI: 10.6084/m9.figshare.22494541.v1
title: Zebrafish reconstructed trees

description: Object containing all single-cell lineage trees built for this dataset provided by Hu, Lelek, Spanjaard et al. (Nature Genetics 2022). <br> Please cite the original publication: https://www.nature.com/articles/s41588-022-01129-5
DOI: 10.6084/m9.figshare.25595997.v2
title: Data for heating performance of a vapor compression heat pump cascaded with a thermoelectric heat pump

description: It provides the measurement data of heating performance of a vapor compression heat pump cascaded with a thermoelectric heat pump
DOI: 10.6084/m9.figshare.28120064.v2
title: Simulation results and validation data of storm surge and wave during Super Typhoon Hato

description: Simulation results and validation data of storm surge and wave during Super Typhoon Hato
DOI: 10.6084/m9.figshare.28930403.v1
title: <b>Silent Selectors: Hand-Mediated Phenotypic Selection for Floral Display Traits in Greenhouse Tomato (</b><b><i>Solanum lycopersicum</i></b><b>)</b>

description: Background Understanding how different pollinator species shape phenotypic selection on floral traits is critical for predicting the evolutionary trajectory of the mating system of flowering plants in changing pollination environments. This study examines the differential effects of buzz pollination by bumblebees (Bombus terrestris) and hand pollination on directional and nonlinear phenotypic selection for two floral display traits—flower size and flower number—through female reproductive success in greenhouse tomatoes (Solanum lycopersicum). Results The results indicate that hand pollination drives directional phenotypic selection for increased flower number (β = 0.16 ± 0.04, P &lt; 0.001) and disruptive phenotypic selection for flower size (γ = 0.06 ± 0.03, P = 0.025), whereas bumblebee pollination enhances fruit yield without exerting significant phenotypic selection on the two floral display traits. Conclusions This study demonstrated that hand and bumblebee pollination exert fundamentally different selective pressures on floral traits, suggesting that relying on natural pollinators may maintain floral trait diversity while still optimizing yield. These findings have important implications for conservation, evolutionary biology, and agricultural practices.
DOI: 10.6084/m9.figshare.6858209.v1
title: Tonic immobility evaluation in meat quail via survival analysis

description: ABSTRACT Tonic immobility (TI) is a way to measure fear, as characterized by the reduced capacity to respond to external stimuli. The time spent in TI indicates the level of fear. Since TI is measured as the time until event occurrence, survival analysis stands out as a suitable statistical method to treat these data. We aimed to investigate the influence of possible factors (lines, sex and age) on fear behavior in meat quail (Coturnix coturnix) measured through TI by using survival analysis (non parametric Kaplan-Meyer method via logrank test). The dataset was composed by TI information provided by 50 animals from each line (UFV1 and UFV2) in each age (14 and 28 days of age), totalizing 200 records. Despite the slight difference between the two evaluated ages, there was no significance for this factor between each studied line, UFV1 (P= 0.1493) and UFV2 (P= 0.2583). The logrank test indicated significant difference (P= 0.0407) between levels of line/sex groups at 14 days of age. We noted that males from UFV2 line presented higher fear behavior in relation to males from UFV1 line. No significant differences were observed for this factor when considering 28 days of age.
DOI: 10.4121/18589535.v1
title: BWM solver, BWM results and model of the operational cost price of hydrogen

description: The dataset includes the best-worst method (BWM) solver results found during expert interviews. In addition, the BWM results file includes the calculations to derive the average weights for the relevant factors and categories for the study as well as the relevance and technology scores for the competing hydrogen production technologies. The dataset also includes the model of the operational cost price of hydrogen as described in the research study.
DOI: 10.6084/m9.figshare.21428109.v1
title: Supplementary Material for: Body Composition Assessment by Dual-Energy X-Ray Absorptiometry: A Useful Tool for the Diagnosis of Lipedema

description: <b><i>Introduction:</i></b> Lipedema is a poorly known condition. Diagnosis is based almost exclusively on clinical criteria, which may be subjective and not always reliable. This study aimed to investigate regional body composition (BC) by dual-energy X-ray absorptiometry (DXA) in patients with lipedema and healthy controls and to determine cut-off values of fat mass (FM) indices to provide an additional tool for the diagnosis and staging of this condition. <b><i>Methods:</i></b> This study is a single-center case-control study performed at Lausanne University Hospital, Switzerland. Women with clinically diagnosed lipedema underwent regional BC assessment by DXA. The control group without clinical lipedema was matched for age and body mass index (BMI) at a ratio of 1:2 and underwent similar examination. Regional FM (legs, arms, legs and arms, trunk, android and gynoid FM) was measured in (kg) and divided by FM index (FMI) (kg/m<sup>2</sup>) and total FM (kg). The trunk/legs and android/gynoid ratios were calculated. For all indices of FM distribution showing a significant difference between cases and controls, we defined the receiver operating characteristic (ROC) curves, calculating the area under the curve (AUC), sensitivity, specificity, and Youden’s index. Types and stages of lipedema were compared in terms of FM indices. Correlation analyses between all FM distribution indices and lipedema stages were performed. <b><i>Results:</i></b> We included 222 women (74 with lipedema and 148 controls). Overall, the mean age was 41 years (standard deviation [SD] 11), and mean BMI was 30.9 kg/m<sup>2</sup> (SD 7.6). A statistically significant difference was observed for all DXA-derived indices of FM distribution between groups, except for arm FM indices. The ROC curve analysis of leg FM/total FM, as a potential indicator of lipedema, resulted in an AUC of 0.90 (95% confidence interval 0.86–0.94). According to Youden’s index, optimal cut-off value identifying lipedema was 0.384. Sensitivity and specificity were 0.95 and 0.73, respectively. We found no significant differences between lipedema types and stages in terms of FM indices, nor significant correlations between the latter and lipedema stages. <b><i>Discussion/Conclusion:</i></b> BC assessment by DXA, and particularly calculation of the leg FM/total FM index, is a simple tool that may help clinicians rule out lipedema in doubtful cases.
DOI: 10.6084/m9.figshare.21932034.v1
title: Supplemental Data 3. 406 PR-encoding amino acid sequences of 68 RCA genomes and 338 references for constructing the PR phylogenetic tree.

description: 406 PR-encoding amino acid sequences of 68 RCA genomes and 338 references for constructing the PR phylogenetic tree.
DOI: 10.6084/m9.figshare.22316641.v6
title: scIBD Website Data

description: Data files used in scIBD (www.scibd.cn) is also available here.Gene expression matrixIntegrated gene expression matrix of scIBD (Anndata object in H5AD format) (scIBD.gex_matrix.h5ad and the raw count matrix scIBD.gex_matrix_raw.h5ad.zip, scIBD.gex_matrix_raw.rds)Integrated gene expression matrix of scIBD (Seurat object in RDS format) (scIBD.gex_matrix.rds)Meta data of scIBD (scIBD_sample_meta_data.txt.gz)Differential expressed genesDifferential expressed genes across cell subtypes within each major cluster (scIBD.deg_by_major_cluster.rds)Differential activated regulonsDifferential regulons between healthy and disease in each major cluster (scIBD.diff_regulon_by_major_cluster.rds)
DOI: 10.6084/m9.figshare.26046106.v1
title: Mechanistic dataset

description: This dataset comprises mechanistic information generated from the USPTO-Full dataset. It includes 154,527 training, 19,234 validation, and 19,249 test reactions, with a total of 719,050, 89,081, and 90,024 elementary steps, respectively. The dataset was created using 86 widely-accepted reaction templates and 175 reaction conditions. It aims to facilitate research in reaction prediction and mechanistic studies by providing detailed reaction pathways and transformations for a wide range of chemical reactions.<br><br>
DOI: 10.6084/m9.figshare.26240648.v3
title: <b>GBD2021_CVDs_AYAs</b>

description: This dataset contains metadata associated with 13 cardiovascular diseases, including prevalence, incidence, mortality, and disability-adjusted life years (DALYs) for individuals aged 15-39 years across 204 countries or territories from 1990 to 2021, as well as for 11 specific cardiovascular diseases. Additionally, the dataset provides data on deaths and DALYs attributable to various risk factors.
DOI: 10.6084/m9.figshare.28120850.v3
title: Expressions and Responses Dataset

description: This dataset is created for developing climate risk public opinion and government response indices for China. The dataset contains 222,923 records, including the message themes, message content, response content, province, city, and the type of disaster represented by the messages.
DOI: 10.17632/56xxmr3sfj
title: Data for water quality parameters and its treatment with water hyacinth and vetiver grass

description: Groundwater quality is a major issue of today’s era. Groundwater quality improvement through use of macrophytes can be economical and efficient. Hence, it will be beneficial where there is scarcity of freshwater and lack of adequate provisions for setting up water treatment plant. In this study, the groundwater samples from different depths of handpumps, located at various locations of Gujaini area of Kanpur city were collected and analyzed for different water quality parameters such as pH, total dissolved solids (TDS), alkalinity, hardness and turbidity. TDS and hardness were observed beyond the limits as mentioned in drinking water standards. For the treatment of TDS and hardness, the macrophytes (water hyacinth and vetiver grass) were grown under observation. While observations, the growth parameters of species (water hyacinth and vetiver grass) like number of leaves, plant weight, length of principal root and number of roots with the passage of days were measured. The removal efficiency of water hyacinth and vetiver grass were also computed for different water quality parameters. The study showed that water hyacinth had higher contaminant reduction capability than vetiver grass. The data generated for various water quality parameters and measured values of growth parameters of species can help the researchers, carrying out research at different locations of Kanpur city.
DOI: 10.6084/m9.figshare.114.v1
title: India Africa Asia HGDP HapMap frappe K12

description: These are the results of a structure analysis performed by FRAPPE, with default settings and K=12, on a combined dataset consisting in 3146 autosomal SNPs for 4025 individuals from 167 populations. Each line corresponds to an individual. The first column is the population identifier, the second column is the individual identifier, the last columns are the proportions of the different ancestry classes determined by FRAPP for the individual. The analyzed data consists in genome-wide SNPs that were obtained from 5 different sources, keeping the SNPs common to all 5 sources.
DOI: 10.6084/m9.figshare.21206507.v3
title: DiasMorph: a dataset of morphological traits and images of Central European diaspores

description: DiasMorph, a dataset of morphological traits and images of diaspores from 1,437 taxa in 513 genera, and 96 families from Central Europe.
DOI: 10.6084/m9.figshare.24646785.v1
title: Dataset and code related to: "Rapid and portable presumptive LAMP assays for the detection of the invasive corn snake (<i>Pantherophis guttatus</i>)"

description: This record includes data and code relating to the manuscript entitled "Rapid and portable presumptive LAMP assays for the detection of the invasive corn snake (<i>Pantherophis guttatus</i>)" as part of the Data Availability statement. The sheet entitled "Corn_LAMP_MASTER" includes all the data relating to sensitivity, specificity and trace DNA amplification testing and "Thermocycler_MASTER_3" contains the data relating to the three different thermocyclers used. The other three csv files are required to conduct the statistical analysis in R using the provided R file.<br>
DOI: 10.6084/m9.figshare.25547149.v1
title: Sato2024_Fruitfly_collectives_data

description: Behavioral, genomic, and simulation dataset of diverse strains of <i>Drosophila melanogaster</i>.
DOI: 10.6084/m9.figshare.28630454.v2
title: SVHN.zip

description: The SVHN dataset is obtained by collecting door num-bers from Google Street View, and each sample contains aset of “0-9’ Arabic numerals.
DOI: 10.6084/m9.figshare.28934144.v1
title: Prediction uploaded on May 5 regarding the outcome of the Inter/Barcellona on May 6

description: Further details about the study are available at the following links:<br>https://osf.io/pcwah<br>https://osf.io/xsb9t
DOI: 10.6084/m9.figshare.29082725.v1
title: Physiological data C. viridis juveniles

description: This database contains all the physiological data of <i>Centropomus viridis</i> juveniles.
DOI: 10.6084/m9.figshare.6939923.v1
title: Data from: Biological motion as an innate perceptual mechanism driving social affiliation

description: This data set contains the raw data needed to reproduce the figures presented in the paper. Analysis code and a bioRxiv preprint of this work are also available.<br>
DOI: 10.17632/gdzwzgxy4n
title: Replication Package for "The Efficiency of the Japanese Government’s Revenue Projection"

description: This is the data and replication code for "The Efficiency of the Japanese Government’s Revenue Projection" to be published in Economics Letters.

Below is the abstract that summarizes the article.

ABSTRACT
This paper evaluates the efficiency of the Japanese fiscal authority’s revenue projections using real-time data from 1960 to 2022. While their one-year-ahead projections are not efficient, their accuracy can be significantly improved by adjusting the forecasts based on the results.
DOI: 10.6084/m9.figshare.3561294.v1
title: Appendix A. Computation of niche regions.

description: Computation of niche regions.
DOI: 10.17605/osf.io/c4efm
title: Pets, Attachment, and Pandemic Stress: Unpacking the Emotional Lifeline

description: This study investigates the impact of attachment anxiety on stress levels during the COVID-19 pandemic, focusing on the role of pet ownership as a potential moderating factor. Utilizing secondary data from a large-scale survey of 430 participants (both pet owners and non-pet owners), the research explores whether pet ownership can buffer the effects of attachment anxiety on stress. The findings indicate that higher attachment anxiety significantly predicts increased stress levels, but pet ownership does not significantly moderate this relationship. The study shows the need for tailored mental health interventions that consider individual differences in attachment styles, suggesting that while pets offer companionship, additional support mechanisms are necessary for individuals with high attachment anxiety to effectively reduce stress. This open science page provides access to the dataset, survey instruments, and code used for the analysis.
DOI: 10.17632/68p2rr4vkh
title: Data for: PERSIANN-CDR BASED CHARACTERIZATION AND TREND ANALYSIS OF ANNUAL RAINFALL IN RIO DE JANEIRO STATE, BRAZIL

description: Estimated annual rainfall dataset and the statistical tests results.
DOI: 10.17632/b24rwrrr27
title: Data for:"FRESF model: An ArcGIS toolbox for rapid assessment of the supply, demand, and flow of flood regulation ecosystem servicess"

description: River floods are globally the most damaging and costliest natural disasters. The functions of nonstructural flood mitigation measures (e.g., water retention by vegetation and soil) provide critical regulation ecosystem services to human beings. For example, the Sponge Cities are national watershed management projects in China to increase the nonstructural flood regulation services, aiming to enable the urban ecosystem to absorb, infiltrate, and retain storm water to mitigate pluvial flooding. Decision-makers need to acquire critical areas for the supply, demand, and flow of flood regulation ecosystem services, which would affect the delivery of services and the distribution of any benefits among stakeholders. However, relatively few empirical studies present this information. One reason is the lack of appropriate methods and tools for a rapid assessment of flood regulation ecosystem services that do not require substantial resources or rely heavily on hydrological process data. This article presents the Flood Regulation Ecosystem Service Flow (FRESF) model to address this gap. FRESF is an open-access and open-source ArcGIS script toolbox for an integrated evaluation of flood regulation ecosystem services' supply, demand, and flow. Based on a land surface process model and a generic framework quantifying ecosystem services flow, FRESF provides a rapid and serviceable assessment framework for the relevant ecosystem services at a relatively low cost and effort. The validation results suggest that the outputs are moderately consistent with the actual flood conditions, compared with the flood disaster of the Yangtze River in 2020. Its open codes and flexible inputs imply that ecologists, planners, decision-makers, and developers involved in ecosystem services would have the opportunity to test and apply the FRESF model in several contexts and even contribute further improvements.
DOI: 10.17632/spth99fm4c
title: KeyNet: An Open Source Dataset of Key Bittings

description: This repository introduces a dataset of obverse and reverse images of 319 unique Schlage SC1 keys, labeled with each key's bitting code. We make our data accessible in an HDF5 format, through arrays aligned where the Nth index of each array represents the Nth key, with keys sorted ascending by bitting code:
/bittings: Each keys 1-9 bitting code, recorded from shoulder through the tip of the key, uint8 of shape (319, 5).
/obverse: Obverse image of each key, uint8 of shape (319, 512, 512, 3).
/reverse: Reverse image of each key, uint8 of shape (319, 512, 512, 3).

Full dataset details available on GitHub https://github.com/alexxke/keynet
DOI: 10.17632/z7h9m8p43b
title: Mendeley Supplemental Table 1: Representative quotes from categories of dermatology match discussion.

description: A collection of representative quotes from various categories of dermatology match discussions. These categories include research year, letters of recommendation, rotation grades, away rotations, interests and activities, interviews, signals, personal statements, DO match, and medical school. The quotes offer insights and advice from different perspectives on the importance and impact of each category on the dermatology match process.
DOI: 10.6084/m9.figshare.1149979.v3
title: Fact or Fiction - Hunchback hypothesis_JESP Pre_reg

description: In this investigation we test the existence of the 'Hunchback Stereotype' and then test whether it matches reality or not. Hunchback stereotype is the tendency for perceivers to overestimate the emotional expressivity of members of low status groups compared to their higher status counterparts.
DOI: 10.6084/m9.figshare.14068949.v1
title: Metadata record for: A deep database of medical abbreviations and acronyms for natural language processing

description: This dataset contains key characteristics about the data described in the Data Descriptor A deep database of medical abbreviations and acronyms for natural language processing. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br>
DOI: 10.6084/m9.figshare.19236741.v1
title: Cervical cancer (Risk Factors) Data Set

description: Adaptation of http://archive.ics.uci.edu/ml/datasets/Cervical+cancer+(Risk+Factors)<br>Ready for usage with ehrapy
DOI: 10.6084/m9.figshare.28816256.v1
title: Raw Data RKI-2024

description: Dental Science
DOI: 10.17632/r2hhpb6z97
title: Mar3450 raw data

description: The Mar3450 raw data from the welds with 0, 0.5 and 1 mm laser beam offset to Ti plate
DOI: 10.6084/m9.figshare.11722428.v1
title: S16_STMSTS

description: Scanning tunneling microscopy and spectroscopy of Ga-intercalated sample. <br>