cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13144/lil-0265
title: Correspondances Adresses - IRIS - 1999

description: La table Iris - Adresses permet la correspondance entre l’adresse et la localisation géographique à l’IRIS-2000®, et couvre 1081 communes.Toutes les voies ou portions de voies entourant un IRIS-2000®, ou contenues dans cet IRIS-2000®, sont décrites, avec un index de parité donnant la situation de la voie par rapport à l’IRIS-2000®, et les numéros des adresses de début et de fin des tronçons considérés.
DOI: 10.13144/lil-0267
title: Correspondances Adresses - Zonages urbains - 2003

description: Les correspondances Adresses - Zonages urbains est un produit de géolocalisation permettant d'effectuer la correspondance entre une adresse et un zonage urbain infracommunal îlot, iris, fraction cantonale de la commune, zone urbaine sensible et zone franche urbaine dans la géographie de 2003. Le fichier liste l'ensemble des façades de 1 226 communes. Une façade est un côté de voie situé entre deux carrefours. Elle est définie par sa voie, sa parité et éventuellement ses numéros de début et de fin.
DOI: 10.15468/dl.j5z2y3
title: Occurrence Download

description: A dataset containing 4247 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Hygrocybe psittacina (Schaeff.) P.Kumm."
 ]
}

 The dataset includes 4247 records from 145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000365-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.42574j
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pugionium dolabratum Maxim."
 ]
}

 The dataset includes 95 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024536-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13786929
title: Sample dataset PythoStitcher [final]

description: This dataset contains four example cases related to the histopathology tissue stitching algorithm PythoStitcher. The dataset is structured as follows:- prostate_4.zip contains four tissue fragments from a prostatectomy specimen from the Radboudumc (Nijmegen, the Netherlands)- prostate_2.zip contains two tissue fragments from a prostatectomy specimen from the Radboudumc (Nijmegen, the Netherlands)- pancreas.zip contains two tissue fragments from a pancreas resection from the Radboudumc (Nijmegen, the Netherlands)- artificial.zip contains four "artificial" tissue fragments which were obtained by digitally shredding a whole-mount from a prostatectomy specimen from the Radboudumc (Nijmegen, the Netherlands)

Each example case contains the following data:\ raw_images (directory with the full resolution digitized slides)\ raw_masks (directory with the tissuemasks generated using the algorithm from Bándi et al) force_config.txt (optional file in pancreas.zip to guide the stitching process for this case)

For instructions on how to apply PythoStitcher to these sample cases, please refer to the PythoStitcher Github repository. If you have any questions about PythoStitcher or require any help setting up PythoStitcher, please contact us at daan.schouten@radboudumc.nl

NOTE: this is the final release of this dataset associated with the official PythoStitcher publication.
DOI: 10.5281/zenodo.7002504
title: Sample dataset PythoStitcher [final]

description: This dataset contains four example cases related to the histopathology tissue stitching algorithm PythoStitcher. The dataset is structured as follows:- prostate_4.zip contains four tissue fragments from a prostatectomy specimen from the Radboudumc (Nijmegen, the Netherlands)- prostate_2.zip contains two tissue fragments from a prostatectomy specimen from the Radboudumc (Nijmegen, the Netherlands)- pancreas.zip contains two tissue fragments from a pancreas resection from the Radboudumc (Nijmegen, the Netherlands)- artificial.zip contains four "artificial" tissue fragments which were obtained by digitally shredding a whole-mount from a prostatectomy specimen from the Radboudumc (Nijmegen, the Netherlands)

Each example case contains the following data:\ raw_images (directory with the full resolution digitized slides)\ raw_masks (directory with the tissuemasks generated using the algorithm from Bándi et al) force_config.txt (optional file in pancreas.zip to guide the stitching process for this case)

For instructions on how to apply PythoStitcher to these sample cases, please refer to the PythoStitcher Github repository. If you have any questions about PythoStitcher or require any help setting up PythoStitcher, please contact us at daan.schouten@radboudumc.nl

NOTE: this is the final release of this dataset associated with the official PythoStitcher publication.
DOI: 10.15151/esrf-es-1920726635
title: Joint-Structural Biology Group (JSBG) BAG proposal for ID29 beamline

description: The aim of the JSBG BAG proposal for ID29 beamline is to develop new methods for time-resolved serial crystallography experiments at 4th generation source and to study time dependent structural conformation of biological macromolecules that are studies at the ESRF-EMBL-GR Joint Structural Biology Group. Method developments include the study of radiation damage at high flux densities and with partially polychromatic beam (1% and 0.3%), the implementation and development of various sample delivery methods - mixing in capillary, microfluidics, tape-drive and fixed targets. This further includes development of GPU-based indexing algorithm, data reduction software, and develop new data collection strategies for pump-probe SSX experiments integrating nanosecond laser. Biological systems include the study of photoactivatable proteins, enzymatic systems through mixing experiments and multi-temperature jump experiments to study protein dynamics.
DOI: 10.15468/dl.zzzbmv
title: Occurrence Download

description: A dataset containing 660 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "TaxonKey is Derallus Sharp, 1882"
 ]
}

 The dataset includes 660 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024537-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17882/100246
title: Zoobenthos of the Chaun Bay 2020

description: The dataset represents data primary processing of zoobenthos samples taken in the Chaun Bay of the East Siberian Sea in October 2020 during an expedition onboard R/V "Akademik Oparin"
DOI: 10.15468/dl.6ncjbj
title: Occurrence Download

description: A dataset containing 1008255 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Plantae",
 "Year 1979-2018"
 ]
}

 The dataset includes 1008255 records from 564 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024530-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17882/100278
title: Chaun Bay Zooplankton

description: Zooplankton was collected at 34 stations in the Chaun Bay, an enclosed bay of the East Siberian Sea (Arctic Ocean), during the 60th cruise of the RV "Akademik Oparin". Sampling was conducted between 9 and 21 October 2020 by Daria A. Yurikova, Glafira Kolbasova, and Vitaly L. Syomin (IORAS). Up to two depth layers were sampled vertically at each station using a Juday net with a mesh size of 180 microns and a mouth opening of 0.1 square meters. One layer was sampled from the bottom to the picnocline, and the second layer was sampled from the picnocline to the surface. If there was strong wind or drift of the vessel, the angle of the wire inclination was taken into consideration. The zooplankton samples were preserved in 4% formalin buffered with borax. The samples were then processed at the Shirshov Institute of Oceanology of the Russian Academy of Sciences (IORAS), by Dr. Ksenia Kosobokova. All zooplankton organisms in a sample were sorted into main taxonomic groups, and for copepods, further to species and stages. Numerous small zooplankton organisms less than 1 mm in size were counted from a sample taken using a stempel pipette, while all larger organisms, especially those that are rare, were counted from the entire sample. The length of copepod prosome was measured from the tip of the cephalosome to the distal end of the last thoracic segment.
DOI: 10.17882/93570
title: The COASTlOOC dataset

description: Coastal Surveillance Through Observation of Ocean Color (COASTlOOC) oceanographic expeditions were conducted in 1997 and 1998 to examine the relationship between the optical properties of seawater and related biological and chemical properties across the coastal-to-open ocean gradient in various European seas. A total of 379 stations were visited along the coasts of the Gulf of Lion in the Mediterranean Sea (n = 61), Adriatic Sea (n = 39), Baltic Sea (n = 57), North Sea (n = 99), English Channel (n = 85) and Atlantic Ocean (n = 38). Particular emphasis was dedicated to the collection of a comprehensive set of apparent (AOPs) and inherent (IOPs) optical properties to support the development of ocean color remote sensing algorithms. The data were collected in situ using traditional ship-based sampling, but also from a helicopter, which is a very efficient means for that type of coastal sampling. The dataset collected during the COASTlOOC campaigns is unique in that it is fully consistent in terms of operators, protocols, and instrumentation. This rich and historical dataset is still today frequently requested and used by other researchers. Therefore, we present the result of an effort to compile and standardize a dataset which will facilitate its use in future development and evaluation of new bio-optical models adapted for optically-complex waters.
DOI: 10.17882/100583
title: Bivalve multi-decadal (1981-2021) records of carbon and nitrogen elemental and isotopic ratios (δ13C, δ15N and C:N) of 33 coastal sites of France

description: Bivalves carbon and nitrogen elemental and isotopic ratios (δ13C, δ15N, C and N%, C:N) times series (1981-2021) from 33 sites in France. Bivalve species are the Pacific oyster Crassostrea gigas, and the mussels Mytilus edulis and Mytilus galloprovincialis. This extensive dataset offers a comprehensive view spanning multiple decades and ecosystems, allowing to track how coastal ecosystems and marine species record changing climate, physical-chemical environments and organic matter cycles. This dataset may also be used to study bivalve physiology. Additionally, these data are crucial for establishing isotope baselines for studying food webs. Ultimately, this data set provide valuable information for more effective ecosystem conservation and management strategies in our rapidly changing world.
DOI: 10.5281/zenodo.13820006
title: trioceros_harennae_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.13820007
title: trioceros_harennae_decontaminated_FSCR.fasta.gz
DOI: 10.15468/dl.agmay6
title: Occurrence Download

description: A dataset containing 226 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Chile",
 "TaxonKey is Bombus dahlbomii Guérin-Méneville, 1835",
 "Year 2005-2021"
 ]
}

 The dataset includes 226 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064483-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.o8hbw0
title: Occurrence Download

description: A dataset containing 2098 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Melinis repens (Willd.) Zizka"
 ]
}

 The dataset includes 2098 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005795-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9w53bx
title: Occurrence Download

description: A dataset containing 8159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Eriocnemis vestita (R.Lesson, 1839)",
 "Year 2000-2021"
 ]
}

 The dataset includes 8159 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073212-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.chewwf
title: Occurrence Download

description: A dataset containing 453 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((23.9315 11.32967,60.79685 11.32967,60.79685 37.14592,23.9315 37.14592,23.9315 11.32967))",
 "HasGeospatialIssue is false",
 "TaxonKey is Caracal Gray, 1843",
 "Year 1950-2023"
 ]
}

 The dataset includes 453 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005195-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9aygna
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aspidoscelis maslini (Fritts, 1969)"
 ]
}

 The dataset includes 43 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005796-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hxx8y8
title: Occurrence Download

description: A dataset containing 35202 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-79.42336 -1.39077,-78.37174 -1.39077,-78.37174 -0.93581,-79.42336 -0.93581,-79.42336 -1.39077))"
 ]
}

 The dataset includes 35202 records from 229 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027233-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvd7gz
title: Occurrence Download

description: A dataset containing 1753 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus rattus (Linnaeus, 1758)",
 "HasCoordinate is True",
 "Country is United States of America",
 "Year is greater than or equal to 1960",
 "Year is less than or equal to 2020",
 "Month is greater than or equal to January",
 "Month is less than or equal to December",
 "HasGeospatialIssue is False",
 "DecimalLatitude is greater than or equal to 24.5",
 "DecimalLatitude is less than or equal to 49.5",
 "DecimalLongitude is greater than or equal to -125.0",
 "DecimalLongitude is less than or equal to -66.5"
 ]
}

 The dataset includes 1753 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117198-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9q8kpl
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lindernia brevidens Skan",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005796-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kcycxa
title: Occurrence Download

description: A dataset containing 4672 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Galeus melastomus Rafinesque, 1810"
 ]
}

 The dataset includes 4672 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012476-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pwzex3
title: Occurrence Download

description: A dataset listing the 15 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Wallis and Futuna",
 "Geometry POLYGON((-176.20641 -13.18909,-176.19148 -13.19767,-176.18847 -13.1914,-176.19963 -13.18548,-176.20641 -13.18909))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves"
 ]
}

 The dataset's 15 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070033-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4y96u7
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cota oretana (Carretero) Oberpr. & Greuter"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0148689-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.plzvcw
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aplochiton taeniatus Jenyns, 1842"
 ]
}

 The dataset includes 89 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005796-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vnphjg
title: Occurrence Download

description: A dataset containing 723811 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Megachilidae"
 ]
}

 The dataset includes 723811 records from 623 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113700-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ytb8ym
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sarcoglottis heringeri Pabst"
 ]
}

 The dataset includes 20 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197407-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oar2hb
title: Occurrence Download

description: A dataset containing 232368 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lythrum salicaria L."
 ]
}

 The dataset includes 232368 records from 576 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005796-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xaxplx
title: Occurrence Download

description: A dataset containing 34746518 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-10.67 71.05,-10.67 34.5,31.55 34.5,31.55 71.05,-10.67 71.05))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "Year 2011-2015"
 ]
}

 The dataset includes 34746518 records from 255 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014695-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vr9zce
title: Occurrence Download

description: A dataset containing 40149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Country derived from coordinates"
 ]
 },
 "TaxonKey is Clausiliidae"
 ]
}

 The dataset includes 40149 records from 288 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0286457-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e5bkam
title: Occurrence Download

description: A dataset containing 2282367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "IucnRedListCategory is one of (EN, CR, VU)"
 ]
}

 The dataset includes 2282367 records from 665 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045063-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.erx44z
title: Occurrence Download

description: A dataset containing 45524 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2010-2021"
 ]
}

 The dataset includes 45524 records from 149 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0318337-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tqenu6
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Onitis aygulus Latreille, 1804",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014696-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x8uhza
title: Occurrence Download

description: A dataset containing 639 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thelypteris patens (Sw.) Small",
 "HasCoordinate is true"
 ]
}

 The dataset includes 639 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045080-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cdtb6a
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hymenaea travassosii Kuhlm. ex Paes"
 ]
}

 The dataset includes 16 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0165334-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.