cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5217205
title: Seismic Signature of the crust from thermodynamic modeling

description: Dataset contains:<br>1) chemical compositions (wt.%) of the crust proposed in the Italian province.<br>2) seismic properties predicted from thermodynamic modeling, using the composition above.<br>3) seismic properties predicted from thermodynamic modeling, along three thermal gradients (10, 30 and 40 K/km) for for a hypothetical crust with composition from <i>Rudnick and Gao</i> [2003]<br>4) predicted dispersion curves and RFs for a hypothetical crust with composition from <i>Rudnick and Gao</i> [2003]
DOI: 10.6084/m9.figshare.5217196
title: Supplementary Material for: Free Fatty Acid Is Associated with Thrombogenicity in Cardioembolic Stroke

description: <i>Background:</i> Recently, the role of free fatty acids (FFAs) in thromboembolism has re-emerged in the context of cardioembolic stroke. Therefore, we attempted to determine the role of FFAs in embolic risk in various potential sources of cardioembolism (PSCE). We hypothesized that if elevated FFA levels in stroke patients are associated with thrombogenesis, then patients with a well-known high risk of embolic sources would have high FFA levels. <i>Methods:</i> Data collected from 2 hospital-based stroke registries were analyzed to investigate the association between FFA and PSCE. <i>Results:</i> A total of 2,770 acute stroke patients, including 539 with cardioembolic stroke, were selected for analysis. FFA was an independent predictor for cardioembolism (OR 2.755, 95% CI 2.221-3.417, <i>p</i> &lt; 0.001). Among the PSCE, FFA levels were significantly associated with high risk of atrial fibrillation (AF), valvular heart disease, congestive heart failure with low ejection fraction, left atrial thrombus, left ventricular thrombus, left atrial smoke, and ventricular wall motion abnormality. FFA levels increased with the number of PSCE per patient without interaction with the presence of AF. <i>Conclusions:</i> Among acute stroke patients, FFA levels increased in groups with higher risk of cardioembolic stroke irrespective of the presence of AF. These results suggest that enhanced thrombogenicity could be the main mechanism to explain the elevated FFA levels in patients with cardioembolic stroke.
DOI: 10.6084/m9.figshare.5217205.v1
title: Seismic Signature of the crust from thermodynamic modeling

description: Dataset contains:<br>1) chemical compositions (wt.%) of the crust proposed in the Italian province.<br>2) seismic properties predicted from thermodynamic modeling, using the composition above.<br>3) seismic properties predicted from thermodynamic modeling, along three thermal gradients (10, 30 and 40 K/km) for for a hypothetical crust with composition from <i>Rudnick and Gao</i> [2003]<br>4) predicted dispersion curves and RFs for a hypothetical crust with composition from <i>Rudnick and Gao</i> [2003]
DOI: 10.6084/m9.figshare.5217202.v2
title: Moderate anemia at diagnosis is an independent prognostic marker of the EUTOS, Sokal, and Hasford scores for survival and treatment response in chronic-phase, chronic myeloid leukemia patients with frontline imatinib

description: <b>Objectives:</b> This study aimed to examine the prognostic value of anemia for the diagnosis of chronic myeloid leukemia in the chronic phase (CML-CP) receiving imatinib. <b>Methods:</b> One hundred and fifty-four CML-CP patients were enrolled. The influences of moderate anemia with hemoglobin (Hb) <b>Results:</b> Moderate anemia was identified in 44 (28.6%) patients. These patients had more aggressive baseline features and higher risks, as assessed by scoring systems, and less favorable treatment responses vs those without anemia, including 3M-EMR (50.0% vs 69.1%), a complete cytogenetic response at 6 months (20.5% vs 50.9%), and a major molecular response at 12 months (22.5% vs 45.2%), with a median follow-up of 54.0 months. Furthermore, an Hb of 10 g/dl better distinguished DMR, EFS, PFS, and OS than the EUTOS, Sokal, and Hasford scores, and better predicted the responses and survivals in combination with 3M-EMR than 3M-EMR alone. <b>Conclusions:</b> This finding highlights the significance of anemia in CML-CP, and suggests that patients with anemia at diagnosis should be carefully monitored and might benefit from more potent TKIs if not achieving 3M-EMR.
DOI: 10.6084/m9.figshare.5217202.v1
title: Moderate anemia at diagnosis is an independent prognostic marker of the EUTOS, Sokal and Hasford scores for survival and treatment response in chronic-phase, chronic myeloid leukemia patients with frontline imatinib

description: Objectives: We aimed to examine the prognostic value of anemia for the diagnosis of chronic myeloid leukemia in the chronic phase (CML-CP) receiving imatinib. Methods: One hundred fifty-four CML-CP patients were enrolled. The influences of moderate anemia with hemoglobin (Hb) &lt; 10 g/dl, four scoring systems and the early molecular response at three months (BCR-ABL ≤ 10%; 3M-EMR) on the achievement of a deep molecular response (DMR, MR4.5), progression-free survival (PFS), event-free survival (EFS) and overall survival (OS) were compared. Results: Moderate anemia was identified in 44 (28.6%) patients. These patients had more aggressive baseline features and higher risks, as assessed by scoring systems, and less favorable treatment responses vs. those without anemia, including 3M-EMR (50.0% vs. 69.1%), a complete cytogenetic response at six months (20.5% vs. 50.9%), and a major molecular response at 12 months (22.5% vs. 45.2%) with a median follow-up of 54.0 months. Furthermore, an Hb of 10 g/dl better distinguished DMR, EFS, PFS and OS than the EUTOS, Sokal and Hasford scores and better predicted the responses and survivals in combination with 3M-EMR than 3M-EMR alone. Conclusions: This finding highlights the significance of anemia in CML-CP and suggests that patients with anemia at diagnosis should be carefully monitored and might benefit from more potent TKIs if not achieving 3M-EMR.
DOI: 10.6084/m9.figshare.5216545
title: Supplementary Material for: Second- to Third-Trimester Longitudinal Growth Assessment for the Prediction of Largeness for Gestational Age and Macrosomia in an Unselected Population

description: <b><i>Background:</i></b> Prenatal detection of excessive growth remains inaccurate. Most strategies rely on a single cross-sectional evaluation of fetal size during the third trimester. <b><i>Objectives:</i></b> To compare second- to third-trimester longitudinal growth assessment with cross-sectional evaluation at the third trimester in the prediction of largeness for gestational age (LGA) and macrosomia. <b><i>Methods:</i></b> A cohort of 2,696 unselected singleton pregnancies scanned at 21 ± 2 and 32 ± 2 weeks was created. Abdominal circumference (AC) measurements were transformed to <i>z</i> values according to the INTERGROWTH-21st standards. Longitudinal growth assessment was performed by calculation of <i>z</i> velocity and conditional growth. Both methods were compared to cross-sectional assessment at 32 ± 2 weeks. Predictive performance for LGA and macrosomia was determined by receiver operating characteristic curve analysis. <b><i>Result:</i></b> A total of 188 (7%) newborns qualified for LGA and 182 (6.8%) for macrosomia. The areas under the curve (AUCs) for 32-week AC <i>z</i> score, AC <i>z</i> velocity, and conditional AC were 0.78, 0.61, and 0.55, respectively, for the prediction of LGA, and 0.75, 0.61, and 0.55, respectively, for the prediction of macrosomia. Both AUCs of AC <i>z</i> velocity and conditional AC were significantly lower (<i>p</i> &lt; 0.001) than the AUC of cross-sectional AC <i>z</i> scores. <b><i>Conclusions:</i></b> In the general population, second- to third-trimester longitudinal assessment of fetal growth is inferior to third-trimester cross-sectional evaluation of size in the prediction of LGA and macrosomia.
DOI: 10.6084/m9.figshare.5216452
title: Supplemetary Data.docx

description: <b>Figure S1: NK cell killing effect against Huh-7 target cells at different effector to target (E: T) ratios</b>The effect of different effector to target ratios on NK cell killing ability against its target Huh-7 cells was performed as shown in the supplementary figure. Where the ratio of E: T, 1:1 ratio showed 10% cytolytic effect, 5:1 and 2:1 showed 20% while 10:1 showed ~ 30% effect.
DOI: 10.6084/m9.figshare.5216452.v1
title: Supplemetary Data.docx

description: <b>Figure S1: NK cell killing effect against Huh-7 target cells at different effector to target (E: T) ratios</b>The effect of different effector to target ratios on NK cell killing ability against its target Huh-7 cells was performed as shown in the supplementary figure. Where the ratio of E: T, 1:1 ratio showed 10% cytolytic effect, 5:1 and 2:1 showed 20% while 10:1 showed ~ 30% effect.
DOI: 10.6084/m9.figshare.5216377
title: Dataset B

description: UEFA Championship ranking-based clustering output
DOI: 10.6084/m9.figshare.5216380
title: Isotopic fingerprints of the Lake Żabińskie (NE Poland) hydrological system on contemporary carbonates precipitated in the lake

description: An isotopic monitoring was undertaken in 2012–2014 at Lake Żabińskie (Mazurian Lakeland, NE Poland). The aim was to identify the factors and processes controlling an isotopic composition of the lake water and to explore the mechanism responsible for recording the climatic signal in stable isotope composition of deposited carbonates. δ<sup>18</sup>O and δ<sup>2</sup>H in the precipitation, lake water column, inflows and outflow, δ<sup>18</sup>O and δ<sup>13</sup>C in the carbonate fraction of sediments trapped in the water column were recorded with monthly resolution. A relationship between δ<sup>18</sup>O and δ<sup>2</sup>H in local precipitation was used to estimate the local meteoric water line. The dataset obtained for the water enabled to identify the modification of the water’s isotopic composition due to evaporation, connected with seasonal lake water stratification and mixing patterns. Statistically significant correlation coefficients suggest that the δ<sup>18</sup>O of the carbonate fraction in the sediment traps depends on the δ<sup>18</sup>O of rainfall water and on air temperature. The fractionation coefficient α shows that in summer months the carbonate precipitation process is closest to equilibrium. As expected for an exorheic lake, no significant correlation was observed between δ<sup>18</sup>O and δ<sup>13</sup>C in precipitated carbonate.
DOI: 10.6084/m9.figshare.5216380.v1
title: Isotopic fingerprints of the Lake Żabińskie (NE Poland) hydrological system on contemporary carbonates precipitated in the lake

description: An isotopic monitoring was undertaken in 2012–2014 at Lake Żabińskie (Mazurian Lakeland, NE Poland). The aim was to identify the factors and processes controlling an isotopic composition of the lake water and to explore the mechanism responsible for recording the climatic signal in stable isotope composition of deposited carbonates. δ<sup>18</sup>O and δ<sup>2</sup>H in the precipitation, lake water column, inflows and outflow, δ<sup>18</sup>O and δ<sup>13</sup>C in the carbonate fraction of sediments trapped in the water column were recorded with monthly resolution. A relationship between δ<sup>18</sup>O and δ<sup>2</sup>H in local precipitation was used to estimate the local meteoric water line. The dataset obtained for the water enabled to identify the modification of the water’s isotopic composition due to evaporation, connected with seasonal lake water stratification and mixing patterns. Statistically significant correlation coefficients suggest that the δ<sup>18</sup>O of the carbonate fraction in the sediment traps depends on the δ<sup>18</sup>O of rainfall water and on air temperature. The fractionation coefficient α shows that in summer months the carbonate precipitation process is closest to equilibrium. As expected for an exorheic lake, no significant correlation was observed between δ<sup>18</sup>O and δ<sup>13</sup>C in precipitated carbonate.
DOI: 10.6084/m9.figshare.5216371
title: Dataset C

description: Computer organization and architecture course marks ranking-based cluster
DOI: 10.6084/m9.figshare.5216368
title: Dataset A

description: Java programing ranking-based clustering objects
DOI: 10.6084/m9.figshare.5216377.v2
title: Dataset B

description: UEFA Championship ranking-based clustering output
DOI: 10.6084/m9.figshare.5216377.v1
title: Dataset C

description: UEFA Championship ranking-based clustering output
DOI: 10.6084/m9.figshare.5216356
title: Ecosystem services and biodiversity trends in Mozambique as a consequence of land cover change

description: The incorporation of ecosystem services (ES) information in planning decisions is an important factor in the sustainable use of natural resources. However, studies assessing the levels and changes of these services at national level are rare. In this paper, we estimate past and future changes in multiple ES and biodiversity, as a consequence of land cover change (LCC) in Mozambique. Water yield, water quality, erosion regulation, climate regulation, and biodiversity were modeled using a spatially explicit approach. Changes in ES and biodiversity were mapped at province level between 2005 and 2009. Through the use of a land change model, land cover was projected for 2025, and the resulting impacts on ES and biodiversity were estimated. We found a moderate increase in climate regulating service between 2005 and 2009. However, water quality (nutrient retention) and biodiversity decreased. LCC for 2025 is expected to have a similar impact on these ES. This study contributes with a methodology that can be useful for monitoring ES and assist decision policies affecting ES provision and trade-offs.<b>EDITED BY</b> Patrick O’Farrell <b>EDITED BY</b> Patrick O’Farrell
DOI: 10.6084/m9.figshare.5216371.v2
title: Dataset C

description: Computer organization and architecture course marks ranking-based cluster
DOI: 10.6084/m9.figshare.5216356.v1
title: Ecosystem services and biodiversity trends in Mozambique as a consequence of land cover change

description: The incorporation of ecosystem services (ES) information in planning decisions is an important factor in the sustainable use of natural resources. However, studies assessing the levels and changes of these services at national level are rare. In this paper, we estimate past and future changes in multiple ES and biodiversity, as a consequence of land cover change (LCC) in Mozambique. Water yield, water quality, erosion regulation, climate regulation, and biodiversity were modeled using a spatially explicit approach. Changes in ES and biodiversity were mapped at province level between 2005 and 2009. Through the use of a land change model, land cover was projected for 2025, and the resulting impacts on ES and biodiversity were estimated. We found a moderate increase in climate regulating service between 2005 and 2009. However, water quality (nutrient retention) and biodiversity decreased. LCC for 2025 is expected to have a similar impact on these ES. This study contributes with a methodology that can be useful for monitoring ES and assist decision policies affecting ES provision and trade-offs.<b>EDITED BY</b> Patrick O’Farrell <b>EDITED BY</b> Patrick O’Farrell
DOI: 10.6084/m9.figshare.5216371.v1
title: Dataset B

description: Computer organization and architecture course marks ranking-based cluster
DOI: 10.6084/m9.figshare.5216344
title: A dynamic microbial community with high functional redundancy inhabits the cold, oxic subseafloor aquifer

description: Data pertaining to the manuscript: "A dynamic microbial community with high functional redundancy inhabits the cold, oxic subseafloor aquifer"Includes:Supplemental Data 1-17 - as described in the manuscriptMetagenome-assembled Genomes - MAGS.tar.gzBins not analyzed during study - BINS.tar.gzPRIMARY contigs - NORTH-POND.SECONDARY.CONTIGS.tar.gzSECONDARY contigs - NORTH-POND.PRIMARY.CONTIGS.tar.gzSECONDARY contigs used during binning - NORTH-POND.BINNEDSECONDARY.CONTIGS.tar.gz
DOI: 10.6084/m9.figshare.5216368.v1
title: Dataset A

description: Java programing ranking-based clustering objects
DOI: 10.6084/m9.figshare.5216344.v1
title: A dynamic microbial community with high functional redundancy inhabits the cold, oxic subseafloor aquifer

description: Data pertaining to the manuscript: "A dynamic microbial community with high functional redundancy inhabits the cold, oxic subseafloor aquifer"Includes:Supplemental Data 1-17 - as described in the manuscriptMetagenome-assembled Genomes - MAGS.tar.gzBins not analyzed during study - BINS.tar.gzPRIMARY contigs - NORTH-POND.SECONDARY.CONTIGS.tar.gzSECONDARY contigs - NORTH-POND.PRIMARY.CONTIGS.tar.gzSECONDARY contigs used during binning - NORTH-POND.BINNEDSECONDARY.CONTIGS.tar.gz
DOI: 10.6084/m9.figshare.5216368.v3
title: Dataset A

description: Java programing ranking-based clustering objects
DOI: 10.6084/m9.figshare.5216368.v2
title: Dataset A

description: Java programing ranking-based clustering objects
DOI: 10.6084/m9.figshare.5216143
title: 16S sequences for Urban Phyllosphere Paper

description: These are the 16S sequences associated with the manuscript entitled: "Tree Leaf Bacterial Community Structure and Diversity Differ Along a Gradient of Urban Intensity" submitted to mSystems.
DOI: 10.6084/m9.figshare.5216137
title: Dataset for: Evolution and plasticity: Divergence of song discrimination is faster in birds with innate song than in song learners in Neotropical passerine birds

description: Plasticity is often thought to speed trait evolution and speciation. For example, plasticity in birdsong may partially explain why clades of song learners are more diverse than related clades with innate song. This “song learning” hypothesis predicts that 1) differences in song traits evolve faster in song learners, and 2) behavioral discrimination against allopatric song (a proxy for premating reproductive isolation) evolves faster in song learners. We tested these predictions by analyzing acoustic traits and conducting playback experiments in allopatric Central American sister pairs of song learning oscines (N = 42) and non-learning suboscines (N = 27). We found that non learners evolved mean acoustic differences faster than did leaners, and that the mean evolutionary rate of song discrimination was 4.3 times faster in non-learners than in learners. This unexpected result may be a consequence of significantly greater variability in song traits in song learners (by 54-79%) that requires song-learning oscines to evolve greater absolute differences in song before achieving the same level of behavioral song discrimination as non-learning suboscines. This points to “a downside of learning” for the evolution of species discrimination, and represents an important example of plasticity reducing the rate of evolution and diversification by increasing variability.
DOI: 10.6084/m9.figshare.5216143.v1
title: 16S sequences for Urban Phyllosphere Paper

description: These are the 16S sequences associated with the manuscript entitled: "Tree Leaf Bacterial Community Structure and Diversity Differ Along a Gradient of Urban Intensity" submitted to mSystems.
DOI: 10.6084/m9.figshare.5216137.v1
title: Dataset for: Evolution and plasticity: Divergence of song discrimination is faster in birds with innate song than in song learners in Neotropical passerine birds

description: Plasticity is often thought to speed trait evolution and speciation. For example, plasticity in birdsong may partially explain why clades of song learners are more diverse than related clades with innate song. This “song learning” hypothesis predicts that 1) differences in song traits evolve faster in song learners, and 2) behavioral discrimination against allopatric song (a proxy for premating reproductive isolation) evolves faster in song learners. We tested these predictions by analyzing acoustic traits and conducting playback experiments in allopatric Central American sister pairs of song learning oscines (N = 42) and non-learning suboscines (N = 27). We found that non learners evolved mean acoustic differences faster than did leaners, and that the mean evolutionary rate of song discrimination was 4.3 times faster in non-learners than in learners. This unexpected result may be a consequence of significantly greater variability in song traits in song learners (by 54-79%) that requires song-learning oscines to evolve greater absolute differences in song before achieving the same level of behavioral song discrimination as non-learning suboscines. This points to “a downside of learning” for the evolution of species discrimination, and represents an important example of plasticity reducing the rate of evolution and diversification by increasing variability.
DOI: 10.6084/m9.figshare.5216089
title: Metadata for Urban Paper

description: This is te metadata associated with the manuscript entitled: "Tree Leaf Bacterial Community Structure and Diversity Differ Along a Gradient of Urban Intensity" submitted to mSystems, written by Isabelle Laforest-Lapointe, Christian Messier and Steven W. Kembel. This metadata was acquired and built by myself on the island of Montreal in 2014.
DOI: 10.6084/m9.figshare.5216050
title: Czech bitterling micro satellites

description: a set of microsatellite alleles (12 loci) on Central European populations of Rhodes amarus
DOI: 10.6084/m9.figshare.5216086
title: R Code for Urban Paper

description: This is the R code written by myself for the urban chapter of my Ph.D. submitted to mSystems under the title of: "Tree Leaf Bacterial Community Structure and Diversity Differ Along a Gradient of Urban Intensity".
DOI: 10.6084/m9.figshare.5216050.v1
title: Czech bitterling micro satellites

description: a set of microsatellite alleles (12 loci) on Central European populations of Rhodes amarus
DOI: 10.6084/m9.figshare.5216089.v1
title: Metadata for Urban Paper

description: This is te metadata associated with the manuscript entitled: "Tree Leaf Bacterial Community Structure and Diversity Differ Along a Gradient of Urban Intensity" submitted to mSystems, written by Isabelle Laforest-Lapointe, Christian Messier and Steven W. Kembel. This metadata was acquired and built by myself on the island of Montreal in 2014.
DOI: 10.6084/m9.figshare.5216086.v1
title: R Code for Urban Paper

description: This is the R code written by myself for the urban chapter of my Ph.D. submitted to mSystems under the title of: "Tree Leaf Bacterial Community Structure and Diversity Differ Along a Gradient of Urban Intensity".
DOI: 10.6084/m9.figshare.5215789
title: Data sets for the article with doi: 10.3389/fpls.2017.01296 Establishing the Bases for Introducing the Unexplored Portuguese Common Bean Germplasm into the Breeding World

description: SSR screening of a Portuguese common bean collection and Andean and Mesoamerican race representatives and wild relatives (from CIAT seed bank).<br>Supplementary data of manuscript with doi: 10.3389/fpls.2017.01296<br><br>
DOI: 10.6084/m9.figshare.5213341
title: Methyl Valerate Autoignition Data

description: This folder contains the volume trace information for methyl valerate ignition associated with the work "Experiments and modeling of the autoignition of methyl pentanoate at low to intermediate temperatures and elevated pressures in a rapid compression machine" by Bryan W. Weber, Justin A. Bunnell, Kamal Kumar, and Chih-Jen Sung.<br><b>Structure</b><br>The folders are structured as follows:<br>equivalence ratio/end of compression pressure/*.[csv,yaml,txt]<br>Within each folder, there are three files associated with each individual experiment. These files are:<br>*_volume.csv: The volume trace for an experiment<br>*_pressure.txt: The pressure trace for an experiment*_volume-trace.yaml: The information used to generate the volume trace, in a format suitable for use with UConnRCMPy<br>Each filename is formatted with the compressed temperature (Tc), initial pressure (P0), and initial temperature (T0), so that each experiment can be uniquely identified. In addition, the information about all of the experiments is summarized in the ignition-delays.csv file.