cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12027780
title: Fire cues and germination of invasive and native grasses in the Cerrado

description: ABSTRACT Fire-related cues may enhance seed recruitment in flammable ecosystems and differences in fire-germination responses of invasive vs. native species can drive the invasion process. We evaluated the effects of heat shock and smoke water solution treatment on seed germination of invasive (Melinis minutiflora, Urochloa decumbens, U. brizantha) and native grasses (Axonopus pressus, Aristida setifolia, Gymnopogon foliosus) of the Cerrado. The effect of fire temperature was tested by exposing seeds to heat shock treatments of 60, 100, and 200 °C for one minute, comparing them to untreated seeds. The effect of smoke was tested by soaking seeds for 24-h in an aqueous smoke comparing them to seeds soaked in distilled water. Differences among treatments were evaluated by ANOVA and randomization tests. None of the tested species had germination stimulated by the temperature or smoke. Both species of Urochloa experienced decreased viability with increasing temperature, while seeds of native species and M. minutiflora tolerated heat shock up to 200 °C. The invasive grasses usually germinated faster than the native grasses. Germination time is therefore a crucial trait driving the invasion process, irrespective of fire-related cues. Other seed traits (e.g. dormancy) and higher resprouting capacity may help invasive species to persist in frequently burned savannas.
DOI: 10.6084/m9.figshare.12027783.v1
title: Local effect of simvastatin combined with different osteoconductive biomaterials and collagen sponge on new bone formation in critical defects in rat calvaria

description: Abstract Purpose To evaluate the local effect of simvastatin (SVT) combined with deproteinized bovine bone (DBB) with hydroxyapatite/β-tricalcium phosphate biphasic ceramics (HA/TCP) and with collagen sponge (CS) on bone repair in critical size defects (CSDs) in rat calvaria. Methods Forty-two 5-mm diameter CSDs were made bilaterally in the calvaria of 18 rats. The animals were allocated according to the type of biomaterial and associations used to fill the CSD. After 8 weeks, the animals were euthanized, and their calvaria were evaluated for repaired tissue composition using histologic and histometric analyses. Results In the histometric analysis, the use of SVT showed to increase bone formation in the CSDs when combined with all the bone substitutes tested in this study (p&lt;0.05). Greater bone formation was observed in the groups with SVT compared to the groups without SVT. Conclusions The use of SVT without the need for a vehicle and combined with a commercially available biomaterial may be a cheaper way to potentiate the formation of bone tissue without the need to produce new biomaterials. Therefore, SVT combined with DBB induced significantly greater new bone formation than did the other treatments.
DOI: 10.6084/m9.figshare.12027771
title: Bringing to light the molecular evolution of GUX genes in plants

description: Abstract Hemicellulose and cellulose are essential polysaccharides for plant development and major components of cell wall. They are also an important energy source for the production of ethanol from plant biomass, but their conversion to fermentable sugars is hindered by the complex structure of cell walls. The glucuronic acid substitution of xylan (GUX) enzymes attach glucuronic acid to xylan, a major component of hemicellulose, decreasing the efficiency of enzymes used for ethanol production. Since loss-of-function gux mutants of Arabidopsis thaliana enhance enzyme accessibility and cell wall digestion without adverse phenotypes, GUX genes are potential targets for genetically improving energy crops. However, comprehensive identification of GUX in important species and their evolutionary history are largely lacking. Here, we identified putative GUX proteins using hidden Markov model searches with the GT8 domain and a GUX-specific motif, and inferred the phylogenetic relationship of 18 species with Maximum likelihood and Bayesian approaches. Each species presented a variable number of GUX, and their evolution can be explained by a mixture of divergent, concerted and birth-and-death evolutionary models. This is the first broad insight into the evolution of GUX gene family in plants and will potentially guide genetic and functional studies in species used for biofuel production.
DOI: 10.6084/m9.figshare.12027774
title: Chemometric Optimization of the Methodology for Determination of Molybdenum in Soils and Plants by Square Wave Adsorptive Stripping Voltammetry

description: The method is based on the adsorptive accumulation of complex molybdenum(VI) with 8-hydroxyquinoline, using voltammetric square wave cathodic stripping voltammetry. The composition and concentration of the supporting electrolyte, frequency (Hz), amplitude (mV) and deposition time (s), were optimized by factorial design in relation to current reduction of molybdenum(VI). The optimum methodology provided the following values for the process variables: scan increase (0.5 mV), pulse amplitude (127 mV), frequency (96 Hz), adsorption time (80 s) and drop size (0.60 mm2), the concentration of KNO3 (2.0 mol L-1), acetate buffer (0.5 mol L-1) and 8-hydroxyquinoline (0.01 mol L-1). The results obtained after optimization showed a linear response in the range from 1.0 to 6.0 mg L-1 and limits of detection and quantification, respectively equal to 0.02 and 0.08 mg L-1. The molybdenum contained in the samples were determined using the optimized methodology, with values consistent with the values determined by atomic emission spectrometry with inductively coupled plasma (ICP-AES).
DOI: 10.6084/m9.figshare.12027780.v1
title: Fire cues and germination of invasive and native grasses in the Cerrado

description: ABSTRACT Fire-related cues may enhance seed recruitment in flammable ecosystems and differences in fire-germination responses of invasive vs. native species can drive the invasion process. We evaluated the effects of heat shock and smoke water solution treatment on seed germination of invasive (Melinis minutiflora, Urochloa decumbens, U. brizantha) and native grasses (Axonopus pressus, Aristida setifolia, Gymnopogon foliosus) of the Cerrado. The effect of fire temperature was tested by exposing seeds to heat shock treatments of 60, 100, and 200 °C for one minute, comparing them to untreated seeds. The effect of smoke was tested by soaking seeds for 24-h in an aqueous smoke comparing them to seeds soaked in distilled water. Differences among treatments were evaluated by ANOVA and randomization tests. None of the tested species had germination stimulated by the temperature or smoke. Both species of Urochloa experienced decreased viability with increasing temperature, while seeds of native species and M. minutiflora tolerated heat shock up to 200 °C. The invasive grasses usually germinated faster than the native grasses. Germination time is therefore a crucial trait driving the invasion process, irrespective of fire-related cues. Other seed traits (e.g. dormancy) and higher resprouting capacity may help invasive species to persist in frequently burned savannas.
DOI: 10.6084/m9.figshare.12027768
title: Palynotaxonomy of Brazilian species of Passifloraceae sensu stricto

description: ABSTRACT This study aims to expand knowledge of the pollen morphology of Passifloraceae and contribute to the taxonomic delimitation of the group by morphologically characterizing pollen grains of species that occur in the Brazilian state of Bahia. Thirty-six species occur in the state, one of the genus Mitostemma (M. glaziovii) and 35 of the genus Passiflora. Pollen samples were acetolysed, measured, and described using light and scanning electron microscopy. The results group the studied species into four pollen types based mainly on aperture type and number, opercular variation, and the presence/absence of ornamentation elements inside the lumina of the reticulum: Pollen type I - species belonging to the subgenera Astrophea and Deidamioides; pollen type II - subgenus Decaloba; pollen type III - subgenus Passiflora; and pollen type IV - M. glaziovii, with pollen characteristics that separate it from the other species analyzed. The results reinforce the recognition of three subgenera of Passiflora. Morphopalynologically the species have very similar pollen types except for those of the subgenus Deidamioides, which are quite diverse and thus included in another pollen type. The results reveal the importance of pollen grains for the taxonomic study of Passifloraceae.
DOI: 10.6084/m9.figshare.12027771.v1
title: Bringing to light the molecular evolution of GUX genes in plants

description: Abstract Hemicellulose and cellulose are essential polysaccharides for plant development and major components of cell wall. They are also an important energy source for the production of ethanol from plant biomass, but their conversion to fermentable sugars is hindered by the complex structure of cell walls. The glucuronic acid substitution of xylan (GUX) enzymes attach glucuronic acid to xylan, a major component of hemicellulose, decreasing the efficiency of enzymes used for ethanol production. Since loss-of-function gux mutants of Arabidopsis thaliana enhance enzyme accessibility and cell wall digestion without adverse phenotypes, GUX genes are potential targets for genetically improving energy crops. However, comprehensive identification of GUX in important species and their evolutionary history are largely lacking. Here, we identified putative GUX proteins using hidden Markov model searches with the GT8 domain and a GUX-specific motif, and inferred the phylogenetic relationship of 18 species with Maximum likelihood and Bayesian approaches. Each species presented a variable number of GUX, and their evolution can be explained by a mixture of divergent, concerted and birth-and-death evolutionary models. This is the first broad insight into the evolution of GUX gene family in plants and will potentially guide genetic and functional studies in species used for biofuel production.
DOI: 10.6084/m9.figshare.12027774.v1
title: Chemometric Optimization of the Methodology for Determination of Molybdenum in Soils and Plants by Square Wave Adsorptive Stripping Voltammetry

description: The method is based on the adsorptive accumulation of complex molybdenum(VI) with 8-hydroxyquinoline, using voltammetric square wave cathodic stripping voltammetry. The composition and concentration of the supporting electrolyte, frequency (Hz), amplitude (mV) and deposition time (s), were optimized by factorial design in relation to current reduction of molybdenum(VI). The optimum methodology provided the following values for the process variables: scan increase (0.5 mV), pulse amplitude (127 mV), frequency (96 Hz), adsorption time (80 s) and drop size (0.60 mm2), the concentration of KNO3 (2.0 mol L-1), acetate buffer (0.5 mol L-1) and 8-hydroxyquinoline (0.01 mol L-1). The results obtained after optimization showed a linear response in the range from 1.0 to 6.0 mg L-1 and limits of detection and quantification, respectively equal to 0.02 and 0.08 mg L-1. The molybdenum contained in the samples were determined using the optimized methodology, with values consistent with the values determined by atomic emission spectrometry with inductively coupled plasma (ICP-AES).
DOI: 10.6084/m9.figshare.12027762
title: Does Prior Percutaneous Coronary Intervention Influence the Outcomes of Coronary Artery Bypass Surgery?

description: Abstract Introduction: Percutaneous coronary intervention (PCI) has been increasingly performed to treat coronary artery disease. The performance of multiple PCI has also been increasing. Consequently, the percentage of patients presenting for coronary artery bypass graft (CABG) surgery is reported to vary from 13 to 40%. The influence of previous PCI on CABG outcomes has been studied in single center, regional studies, registries and meta-analyses. Some reports showed a negative effect on mortality and morbidity in early or long-term follow-up, but others did not find this influence. Methods and Results: A cohort of 3007 patients consecutively operated for CABG, 261 of them with previous PCI, were included in this analysis. Comparison of the groups "previous PCI" and "primary CABG" was made in the original cohort and in a propensity score matched cohort of 261 patients. There were some differences in preoperative clinical characteristics in both types of cohort, even in the matched one. Outcomes were compared at 30 days, 1 year and 5 years of follow-up. There were no statistically significant differences in mortality in any period or cohort. There were some differences in other outcomes as readmission and composite events, including cardiovascular death at 1 and 5 years of follow-up. These differences, neverthless, were not confirmed in comparison with the matched cohort. Conclusion: Although there are some limitations in this study, it was not found consistent negative influence of previous PCI on CABG.
DOI: 10.6084/m9.figshare.12027765
title: Insecticidal and Acaricidal Activity of Essential Oils Rich in (E)-Nerolidol from Melaleuca leucadendra Occurring in the State of Pernambuco (Brazil) and Effects on Two Important Agricultural Pests

description: Essential oils from the leaves, stems, flowers and fruits of Melaleuca leucadendra growing in the state of Pernambuco, Brazil, were analyzed using gas chromatography-mass spectrometry (GC-MS). The effects of the oils and their major constituent were evaluated on the agricultural pests Tetranychus urticae and Plutella xylostella in different stages of development. The analysis revealed a M. leucadendra chemotype rich in (E)-nerolidol (81.78 ± 0.90 to 95.78 ± 1.20%). P. xylostella was more susceptible to the oils and major constituent than T. urticae. The fruit oil was 1.5-fold more toxic than the leaf oil to T. urticae eggs. (E)-Nerolidol was 5.5-fold and 4.5-fold more toxic to T. urticae adults than the leaf and fruit oils, respectively. Azamax® used as the positive control was more efficient than the oils and (E)-nerolidol against T. urticae. However, the oils and (E)-nerolidol were more toxic to P. xylostella than Azamax®.
DOI: 10.6084/m9.figshare.12027768.v1
title: Palynotaxonomy of Brazilian species of Passifloraceae sensu stricto

description: ABSTRACT This study aims to expand knowledge of the pollen morphology of Passifloraceae and contribute to the taxonomic delimitation of the group by morphologically characterizing pollen grains of species that occur in the Brazilian state of Bahia. Thirty-six species occur in the state, one of the genus Mitostemma (M. glaziovii) and 35 of the genus Passiflora. Pollen samples were acetolysed, measured, and described using light and scanning electron microscopy. The results group the studied species into four pollen types based mainly on aperture type and number, opercular variation, and the presence/absence of ornamentation elements inside the lumina of the reticulum: Pollen type I - species belonging to the subgenera Astrophea and Deidamioides; pollen type II - subgenus Decaloba; pollen type III - subgenus Passiflora; and pollen type IV - M. glaziovii, with pollen characteristics that separate it from the other species analyzed. The results reinforce the recognition of three subgenera of Passiflora. Morphopalynologically the species have very similar pollen types except for those of the subgenus Deidamioides, which are quite diverse and thus included in another pollen type. The results reveal the importance of pollen grains for the taxonomic study of Passifloraceae.
DOI: 10.6084/m9.figshare.12027762.v1
title: Does Prior Percutaneous Coronary Intervention Influence the Outcomes of Coronary Artery Bypass Surgery?

description: Abstract Introduction: Percutaneous coronary intervention (PCI) has been increasingly performed to treat coronary artery disease. The performance of multiple PCI has also been increasing. Consequently, the percentage of patients presenting for coronary artery bypass graft (CABG) surgery is reported to vary from 13 to 40%. The influence of previous PCI on CABG outcomes has been studied in single center, regional studies, registries and meta-analyses. Some reports showed a negative effect on mortality and morbidity in early or long-term follow-up, but others did not find this influence. Methods and Results: A cohort of 3007 patients consecutively operated for CABG, 261 of them with previous PCI, were included in this analysis. Comparison of the groups "previous PCI" and "primary CABG" was made in the original cohort and in a propensity score matched cohort of 261 patients. There were some differences in preoperative clinical characteristics in both types of cohort, even in the matched one. Outcomes were compared at 30 days, 1 year and 5 years of follow-up. There were no statistically significant differences in mortality in any period or cohort. There were some differences in other outcomes as readmission and composite events, including cardiovascular death at 1 and 5 years of follow-up. These differences, neverthless, were not confirmed in comparison with the matched cohort. Conclusion: Although there are some limitations in this study, it was not found consistent negative influence of previous PCI on CABG.
DOI: 10.6084/m9.figshare.12027765.v1
title: Insecticidal and Acaricidal Activity of Essential Oils Rich in (E)-Nerolidol from Melaleuca leucadendra Occurring in the State of Pernambuco (Brazil) and Effects on Two Important Agricultural Pests

description: Essential oils from the leaves, stems, flowers and fruits of Melaleuca leucadendra growing in the state of Pernambuco, Brazil, were analyzed using gas chromatography-mass spectrometry (GC-MS). The effects of the oils and their major constituent were evaluated on the agricultural pests Tetranychus urticae and Plutella xylostella in different stages of development. The analysis revealed a M. leucadendra chemotype rich in (E)-nerolidol (81.78 ± 0.90 to 95.78 ± 1.20%). P. xylostella was more susceptible to the oils and major constituent than T. urticae. The fruit oil was 1.5-fold more toxic than the leaf oil to T. urticae eggs. (E)-Nerolidol was 5.5-fold and 4.5-fold more toxic to T. urticae adults than the leaf and fruit oils, respectively. Azamax® used as the positive control was more efficient than the oils and (E)-nerolidol against T. urticae. However, the oils and (E)-nerolidol were more toxic to P. xylostella than Azamax®.
DOI: 10.6084/m9.figshare.12027750
title: Media preferences, micro-morphometric analysis, and cardinal growth temperature determination for Phytophthora infestans sensu lato isolated from different hosts in Colombia

description: Abstract During the last years Phytophthora infestans sensu lato (Mont. De Bary) has caused epidemics in Colombia in Andean fruit crops such as Solanum quitoense and Solanum betaceum. Establishment of new or modified experimental procedures to study this pathogen is a mandatory subject for scientists. Twelve isolates of Phytophthora spp. obtained from six different Solanum hosts in Colombia were used to evaluate the effect of five different solid media for growth and ability to produce sporangia and liberate zoospores. Determination of the best media culture and optimal growth temperature were necessary to perform measurements and correlate the provenance of isolates with phenotypic traits. Modifications were made to use ingredients available in local markets on the following media: lime bean agar (LBA), Tree tomato or tree tomato agar (TA), carrot agar (AZ), Rye A modified agar and 32% non-clarified V8 agar. Cardinal temperature determination was performed at 10, 15, 20, and 25 °C. Morphometric traits were measured once the optimal media culture and temperature were defined. Correlation analysis showed that there is a relationship between the host and isolate’s preferences for media culture and optimal growth temperature. In addition, the production of characteristic sporangia, sporangiophore and mycelia was related with the media type used and host from which the isolate was collected. In this work useful information was provided to make studies about the biology and development of isolates gathered from cultivated and wild non-traditional hosts.
DOI: 10.6084/m9.figshare.12027744
title: Environmental factors affect population structure of tree ferns in the Brazilian subtropical Atlantic Forest

description: ABSTRACT Tree ferns are important elements of tropical forests, mainly because they are common and provide microhabitats for epiphytic plants. Due to their ecological importance, the aim of this study was to evaluate population structure, distribution, and influence of environmental variables on tree ferns in the state of Santa Catarina, southern Brazil. All tree ferns with a diameter at breast height ≥ 10 cm on 418 sampling units (SUs) systematically distributed throughout the study area were measured (total sampled area of 153.4 ha). Population structure was evaluated through classical phytosociological parameters and the relationships among dominance and environmental variables were evaluated through multiple linear regression models. Dicksonia sellowiana presented the greatest importance value among all species (IV = 13.19 %), followed by Alsophila setosa (IV = 4.37 %) and Cyathea phalerata (IV = 2.71 %). Altitude and mean rainfall of the driest quarter were significantly related to the dominance of D. sellowiana in most of the SUs. The mean temperature of the driest quarter and aspect were significantly related to the dominance of Cyatheaceae. Our study demonstrates that tree ferns are important elements of forest communities in the state of Santa Catarina.
DOI: 10.6084/m9.figshare.12027750.v1
title: Media preferences, micro-morphometric analysis, and cardinal growth temperature determination for Phytophthora infestans sensu lato isolated from different hosts in Colombia

description: Abstract During the last years Phytophthora infestans sensu lato (Mont. De Bary) has caused epidemics in Colombia in Andean fruit crops such as Solanum quitoense and Solanum betaceum. Establishment of new or modified experimental procedures to study this pathogen is a mandatory subject for scientists. Twelve isolates of Phytophthora spp. obtained from six different Solanum hosts in Colombia were used to evaluate the effect of five different solid media for growth and ability to produce sporangia and liberate zoospores. Determination of the best media culture and optimal growth temperature were necessary to perform measurements and correlate the provenance of isolates with phenotypic traits. Modifications were made to use ingredients available in local markets on the following media: lime bean agar (LBA), Tree tomato or tree tomato agar (TA), carrot agar (AZ), Rye A modified agar and 32% non-clarified V8 agar. Cardinal temperature determination was performed at 10, 15, 20, and 25 °C. Morphometric traits were measured once the optimal media culture and temperature were defined. Correlation analysis showed that there is a relationship between the host and isolate’s preferences for media culture and optimal growth temperature. In addition, the production of characteristic sporangia, sporangiophore and mycelia was related with the media type used and host from which the isolate was collected. In this work useful information was provided to make studies about the biology and development of isolates gathered from cultivated and wild non-traditional hosts.