cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57837/cnr-imaa/ares/actris-earlinet/2024/aky/lidar_ratio_355
title: ACTRIS-EARLINET 2024 lidar ratio profiles at 355nm over AKY Antikythera - Greece

description: ACTRIS-EARLINET 2024 lidar ratio profiles at 355nm over AKY Antikythera - Greece.
This dataset collects all the lidar ratio profiles at 355nm collected in 2024 at the aerosol remote sensing AKY station (Antikythera - Greece). This dataset is incremental: data collected in 2024 are added as soon as a new observation is collected in 2024 and added to the ACTRIS/EARLINET database.
DOI: 10.57837/cnr-imaa/ares/actris-earlinet/2024/aky/lidar_ratio_532
title: ACTRIS-EARLINET 2024 lidar ratio profiles at 532nm over AKY Antikythera - Greece

description: ACTRIS-EARLINET 2024 lidar ratio profiles at 532nm over AKY Antikythera - Greece.
This dataset collects all the lidar ratio profiles at 532nm collected in 2024 at the aerosol remote sensing AKY station (Antikythera - Greece). This dataset is incremental: data collected in 2024 are added as soon as a new observation is collected in 2024 and added to the ACTRIS/EARLINET database.
DOI: 10.17632/tbynrzn5sd.1
title: RNA-seq on C2C12 myoblasts treated with 1 uM of 20-hydroxyecdysone for 24 hours. Part 2. 20E-treated samples.

description: This dataset is a part 2 of a project on RNA-seq data of C2C12 myoblasts treated with 1 uM of 20-hydroxyecdysone (ecdysterone) for 24 hours.
This dataset contains only 20E-treated samples (7-12CIN)
Device - NextSeq2000 Illumina
Reads - 51 cycles
Kit - TruSeq Stranded mRNA Illumina
Indexes - IDT for Illumina TruSeq RNA UD Indexes

For RNA-seq analysis, C2C12 myoblasts were treated with 1 μM of 20E for 24 hours. The control cells were treated with DMSO. Six biological replicates for each sample were used. Total RNA was extracted using the MagNA Pure Compact RNA Isolation Kit (Roche, Switzerland) on a MagNA Pure Compact instrument (Roche). RNA concentration was measured using a Qubit 4 fluorometer (Thermo Fisher Scientific, USA); RNA quality was assessed using an Agilent 2100 Bioanalyzer (Agilent Technologies, USA). The RNA integrity number (RIN) of the isolated RNA was ≥ 9.5.
cDNA libraries were prepared from 1 μg of total RNA using the TruSeq Stranded mRNA Library Prep Kit (Illumina, USA) according to the manufacturer's instructions. Libraries were sequenced on an Illumina NextSeq 2000 System in single-read mode (51 bp). A minimum of 20 million reads were generated for each sample.

Sample information:

7CIN - 20E-treated (1 uM, 24h), replicate 1;
8CIN - 20E-treated (1 uM, 24h), replicate 2;
9CIN - 20E-treated (1 uM, 24h), replicate 3;
10CIN - 20E-treated (1 uM, 24h), replicate 4;
11CIN - 20E-treated (1 uM, 24h), replicate 5;
12CIN - 20E-treated (1 uM, 24h), replicate 6.
DOI: 10.17632/ypym6smhn2.3
title: Data of Chinese designer- entrepreneur’s digital storytelling and audiences’ engagement

description: These Data have been collected from Jicheng fashion designer entrepreneur’s (FDE’s) Weibo where she posted (e.g. text, photo) and interacted with her audiences. The author initially identified which item of cultural content is embedded in her each post with ten categories and have added up them at the same time, and next in importance measured statistically her audiences’ engagement activity to each post corresponds, finally calculated the percent to six cultural items and the average to three engagement activity items.
DOI: 10.17632/kw8nxnvnyg.1
title: LINF_220007000

description: Nucleolar protein 168 | NOP168; Leishmania infantum (strain JPCM5)
DOI: 10.17632/tvt7mg5bf3.1
title: Touchmap

description: Code and derived data for generating figures for Touchmap publication
DOI: 10.17632/j4zhwgg4fk.1
title: Sleep quality assessment in Fitness Functional Athletes: A Cross-sectional Study

description: Cross-sectional and descriptive study with a sample composed of elite functional fitness athletes. Sociodemographic and sleep quality information (Pittsburgh Sleep Quality Index – PQSI) was collected in the Transmutation and Accumulation phases. For the analysis of sociodemographic data, practice of sports, consumption of beverages and energy supplements, measures of central tendency and data dispersion were adopted, in absolute frequency. Data normality was assessed using the Shapiro-Wilk test. Data from the evaluation of sleep quality through the PSQI are expressed in absolute values (%), or mean ± standard deviation (SD) or n (%). To compare the categories of the components of the IQSP, Fisher's Exact Test was used. The McNemar Test was used to compare the phases, except for the variables related to sleep quality (waking time, bedtime, daily sleep time, sleep latency and sleep efficiency), which were evaluated using the test from Wilcoxon. Analyzes were performed using SPSS v. 21
DOI: 10.17632/ghb9gd2m28.1
title: Data for "Evidences for cryptic sulfur cycling and implications on the budget of sulfide weathering in the rapidly eroding Eastern Tibetan Plateau"

description: This dataset contains all the data used in the research article 'Sulfide weathering and sulfur cycling in the rapidly eroding Tibetan Plateau.
DOI: 10.17632/sypc6pz96f.1
title: LDHU3_16.0310

description: Protein tyrosine phosphatase PRL-2; Leishmania donovani (HU3 strain)
DOI: 10.17632/rp6md3rwg5.1
title: LINF_230006800

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.14675860
title: CDC Environmental Justice Index Data File Archive

description: All data files required to run the CDC Environmental Justice Index website, as of January 15, 2025. Sourced from https://www.atsdr.cdc.gov/place-health/php/eji/eji-data-download.html
DOI: 10.5281/zenodo.14675861
title: CDC Environmental Justice Index Data File Archive

description: All data files required to run the CDC Environmental Justice Index website, as of January 15, 2025. Sourced from https://www.atsdr.cdc.gov/place-health/php/eji/eji-data-download.html
DOI: 10.17632/h5b3zbtw8v.1
title: Overlapping and touching G banded chromosome dataset

description: The automated Karyotyping  System (AKS)  is a computerized tool in the field of cytogenetics. G banded metaphase images are often the inputs to such systems. These input images usually contain overlapping and touching chromosomes.  The overlapping and touching chromosome segmentation is of great research interest in the area of AKS research and development.  However, the publicly available dataset in this domain is quite less.    This issue is addressed with this contribution. 

 The dataset contains 500 overlapping and touching chromosomes from G-banded metaphase images and the respective mask (label images).   These G-banded metaphase images are prepared from the volunteer blood samples at the Regional Cancer Center, Thiruvananthapuram, Kerala, India, through a series of cytogenetic lab procedures.  This dataset contains overlapping and touching with only two chromosomes and the respective label images. The label images are the target segmentation maps.  The segmentation map provides information about the chromsome1, chromosome2, and the overlapping region between the chromosomes.   This dataset can be utilized to design overlapping and touching chromosome segmentation algorithms.
DOI: 10.17632/h5b3zbtw8v.2
title: Overlapping and touching G banded chromosome dataset

description: The automated Karyotyping System (AKS) is a computerized tool in the field of cytogenetics. G banded metaphase images are often the inputs to such systems. These input images usually contain overlapping and touching chromosomes. The overlapping and touching chromosome segmentation is of great research interest in the area of AKS research and development. However, the publicly available dataset in this domain is quite less. This issue is addressed with this contribution. 

 The dataset contains 500 overlapping and touching chromosomes from G-banded metaphase images and the respective mask (label images). These G-banded metaphase images are prepared from the volunteer blood samples at the Regional Cancer Center, Thiruvananthapuram, Kerala, India, through a series of cytogenetic lab procedures. This dataset contains overlapping and touching with only two chromosomes and the respective label images. The label images are the target segmentation maps. The segmentation map provides information about the chromsome1, chromosome2, and the overlapping region between the chromosomes. This dataset can be utilized to design overlapping and touching chromosome segmentation algorithms. 

Version 1 of this dataset includes only the. npz file. The dataset is provided as an image dataset along with.h5 file, which are commonly used in machine learning. Version 1 describes the steps for creating image files. The steps for preparing.h5 files are provided here.
DOI: 10.17632/r77bb4kd5y.1
title: Data Iron Isotopes reveal volcanogenic input during Oceanic Anoxic Event 2 (OAE 2 ~94 Ma)

description: Data Fe isotope data during OAE 2 from the Iona-1 core in the western Interior Seaway
DOI: 10.17632/jwhvxfbf36.1
title: LDHU3_18.0610

description: BTB/POZ domain containing protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/hvrffb3hnt.1
title: LDHU3_16.0360

description: Proteasome 26S non-ATPase subunit 9; Leishmania donovani (HU3 strain)
DOI: 10.17632/7wv7p5sk6k.1
title: LDHU3_18.0600

description: Uracil-DNA-glycosylase; Leishmania donovani (HU3 strain)
DOI: 10.17632/9vcnxppn9h.1
title: LINF_360034400

description: dihydrolipoamide acetyltransferase precursor
Leishmania infantum (strain JPCM5)
DOI: 10.17632/cbhchhcc9z.1
title: LINF_350006200

description: Coatomer subunit zeta; Leishmania infantum (strain JPCM5)
DOI: 10.17632/nygr3fpk7f.1
title: LINF_120007800

description: SET18; Leishmania infantum (strain JPCM5)
DOI: 10.17632/ry5372r6pd.1
title: LINF_220019400

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/y7bn3bwzkz.1
title: Social support ,The quality of life and Mental health of donors post-donation

description: The data included scale assessments of post-operative social support, family functioning, and the mental health and quality of life of living liver donors after donation.
DOI: 10.17632/4fd4gt4gnw.1
title: Amelin 2024 GCA Leaching Fractionation figures source files revised v8

description: Figure source files for the manuscript "Fractionation of radiogenic Pb isotopes in meteorites and their components induced by acid leaching" submitted to GCA, revised version v8 of 21 August 2024. The detailed information about individual files in the document included in this set.
DOI: 10.17632/gd69567gh2.1
title: CUSP9v3-U3082-part2

description: Label-free live-cell imaging and endpoint cell viability data obtained from exposing the patient derived glioblastoma cell line U3082 (see related article below), on all combinations of the CUSP9v3 protocol from order 5 to 9. The standard-of-care drug, temozolomide, was used as add-on to all combinations. 

There are 4 .zip files containing all the imaging data, one for each 384-well plate used. Every .zip file contains 5544 grayscale images of size 800x992 pixels and every experimental well consists of a temporal sequence of 18 such images. The experiment was performed in quadruplicate and the associated plate layouts used for acoustic liquid dispension are also included as .xlsx files. The .log file contains the cell viability data for all plates.
DOI: 10.17632/48x9wdtxmw.1
title: An interaction of several volumes with negative buoyancy during their deepening in freshwater environment

description: A database gives photo-recordings of laboratory experiments of deepening of several volumes (2 mL) with negative buoyancy in freshwater environment. The density difference between the fresh water in the hydroflume and the volume with negative buoyancy (with salt and dye) was 10^-4 g/cm^3. To record the process of deepening of individual volumes a Sony-58α digital camera (20 Mp) with a frame rate of 1.78 Hz was used.
The [0_special_devices] folder contains images of a general view of the special input device used in the experiments: (i) three funnels, the centers of which are located at a distance of 5 cm from each other – used in series of weak interactions of small volumes of water with negative buoyancy and during “leapfrog”; (ii) two funnels, the centers of which are located at 1-1.5 cm – were used for the case with active interaction and the wave nature of the interaction; (iii) two funnels, the centers of which are located at a distance of 3 cm from each other – were used for the case of interaction of volumes on the bottom slope.
Folder [1] contains two series of weak interactions between deepening volumes of salt water in freshwater environment.
Folder [2] contains two series of active interactions between deepening volumes of salt water in freshwater environment.
Folder [3] contains one series of experiments in which the wave nature of the interaction of deepening volumes of salt water in freshwater environment was recorded.
Folder [4] contains two series of interaction of volumes on the bottom slope (bottom slope angle is 4 degrees).
Folder [5] contains one series that describes the case of “leapfrog”: the second volume overtakes the first, and then the first overtakes the second.
DOI: 10.17632/ht2pjmh5cd.1
title: age model (v1) of sediment core KEC

description: This file, age model of sediment core KEC.xlsx, provides the age control points for sediment core KEC (36.13°N, 158.21°E, water depth 3407 m). This age model is generated for core KEC collected onboard of R/V Tan Kah Kee implementing the open research cruise NORC2022-306 supported by NSFC Shiptime Sharing Project (project number: 42149303).
DOI: 10.17632/tr2xz744pv.1
title: The hidden link between dry ankaramitic melts and giant alkalic-type epithermal Au deposits: The Lihir Island example

description: Analytical results
DOI: 10.17632/d4bsz8jzcz
title: LDHU3_10.1600

description: Tumour suppressor - Mitostatin; Leishmania donovani (HU3 strain)
DOI: 10.17632/d4bsz8jzcz.1
title: LDHU3_10.1600

description: Tumour suppressor - Mitostatin; Leishmania donovani (HU3 strain)
DOI: 10.17632/c3trp7jt3n.2
title: Comparison of Yarrowia lipolytica growth and rProt synthesis when cultured in different vessels

description: 1. Introduction
The aim of this experiment was to quantitatively describe the costs of culturing Y. lipolytica strain synthesizing a fluorescent reporter protein (rProt) in different volumes / different vessels.

2. Methodology
The Yarrowia lipolytica strain used in this experiment was JMY2810 (genotype: MATa, ura3::pTEF-RedStar2-LEU2-Zeta-URA3ex-pTEF-empty, leu2-270, xpr2-322; phenotype: ΔAEP, ΔAXP, suc+, ura+, leu+, intracellular RedStarII, Zeta platform). The YPG medium was composed as follows [g L-1]: yeast extract, 10 (BTL, Lodz, Poland); peptone 20 (BTL); glycerol, 35 (POCH). Precultures were developed in standard YPG medium. All the media were autoclaved. Technical parameters of the culturing vessels used and shaking parameters are presented in Table 1 (pdf). 
The main cultures were continued for 48 h and samples were collected at the end of the cultivation time. Precultures were developed for 18h at 28 °C in the 300mL shake flasks. The main cultures were inoculated at 5% (v/v).
Samples were analyzed for growth and fluorescence from the reporter protein (RedStar2) following dilution in 0.75% NaCl (POCH) to match a linear range of the methods. Absorbance was measured at 600 nm in transparent 96-well plates (Costar; Merck). FL was determined under at ex/em 550/595 nm in black opaque plates (Thermo Fisher Scientific). Both measurements were done using a Tecan Spark automatic plate reader (Tecan Group Ltd., Mannedorf, Switzerland). pH level at the end of cultures was determined in the supernatant using indicatory strips (POCh, Poland).
The concentration of the carbon source and the main metabolites was analyzed through HPLC, under the following conditions: Agilent Technologies 1200 series (Agilent Technologies, Santa Clara, USA), equipped with a refractive-index detector (G1362A) and a Rezex ROA-Organic Acid H+ column (Phenomenex, Torrance, USA), and 0.005 N H2SO4 as eluent at a flow rate of 0.6 [mL/min], at 40 °C. The 96-well plate cultures were pooled to obtain sufficient amounts of the supernatant. The analysis was conducted in technical duplicate.
Statistical significance of the difference in a given measure was assessed by analysis of variance (ANOVA) test, with a significance level set at p-value &lt; 0.05 (RStudio and Visual Studio Code, Microsoft), and equality of variances was checked with the Levene test. The homogenous groups were calculated using Tukey HSD post-hoc analysis (RStudio with relevant packages). The results were calculated based on 5 – 48 biological repetitions.

3. Results
The raw results from fluorescence and optical density measurements, as well as the HPLC data, are presented in the Table S1 (xlsx) excel file. 
A graphical presentation of the data processed using statistical analysis is given in the main manuscript as Figures 1 to 4.
DOI: 10.17632/9n9jjkt3ys.1
title: LINF_120010900

description: TFIIIC subunit Tau131; Leishmania infantum (strain JPCM5)
DOI: 10.17632/29n5vmh3z5.1
title: LINF_120009500

description: Bromodomain factor 6 | BDF6; Leishmania infantum (strain JPCM5)
DOI: 10.17632/432j8zbmhz.1
title: LINF_350015700

description: Selenoprotein T; Leishmania infantum (strain JPCM5)
DOI: 10.17632/rx9rv4g8dy.1
title: LINF_350015100

description: Zinc finger protein | ZC3H11; Leishmania infantum (strain JPCM5)
DOI: 10.17632/tj6kfxsnf7.1
title: LINF_120013500

description: surface antigen protein 2; Leishmania infantum (strain JPCM5)
DOI: 10.17632/34hbznt9j9.1
title: LINF_120011300

description: Tetratricopeptide repeat (TPR)-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/23m68927r3.1
title: LINF_350020200

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/chpmt7dfsj.1
title: Beware of hitchhiking ticks? Clarifying the variable roles of bird families in tick movement along migratory routes

description: Ticks are blood-feeding parasites which act as major vectors for various pathogenic microorganisms affecting both animal and human health. Hard ticks are known to “hitchhike” on migratory birds as they transit from breeding to overwintering grounds in spring and autumn, potentially leading to exchange and establishment of non-endemic tick species in novel environments. Even though, there is a lack of understanding of which migratory bird families play a role in movement of specific tick genera and what influence migratory season may have. To fill this knowledge gap, we performed a systematic literature review regarding primary data of ticks moving on migratory birds within the African-Western Palearctic flyways. In total, 34 studies were found which showed 123 bird species from 37 families connected to potential movement of 26 tick species representing six genera (Amblyomma, Dermacentor, Haemaphysalis, Hyalomma, Ixodes, Rhipicephalus). Statistical analysis showed bird families which carried above average number of ticks were only found for interactions with Hyalomma and Ixodes ticks with below average estimates found for all tick genera besides Rhipicephalus. Contrary to expectation, no tick genus, which was found in both migratory seasons, was estimated to have increased numbers in one season or the other. In certain cases, tick genera (e.g., Amblyomma) were only found on birds during spring migration. This pattern could highlight that the assemblage of ticks present on a bird at capture does not represent the ticks present at the point of migratory departure, highlighting an understudied importance of stopover sites to potential tick introduction or turnover. Taken together, the results presented here provide guiding information for further analysis into species specific interactions which will allow for the integration of individual level variation into understanding the risk of tick movement with migratory birds and potential for emergent disease.

Data included here are the studies and the raw collected data in relation to the above mentioned project.
DOI: 10.17632/8589ysv6kn.2
title: Texas Mussel Threat Impact Analysis

description: A data driven approach to Texas freshwater mussel NatureServe conservation rankings. These data provide summary and calculations of the Threat Impact analysis which is comprised of two components, scope and severity. Because population level data largely are non-existent for most mussel species, we attempted to quantify these metrics with life history data as a proxy for evaluating species resiliency to environmental threats.
DOI: 10.17632/dhk3p4y6b9.1
title: Calibration and Verification of EPA-SWMM based IWS model

description: The repository holds the data, code, and EPA-SWMM model inputs linked to the Sarisen et al. (2023) publication. Specifically, it provides:

1.Python scripts for calibration.
2.Data gathered from experiments.
3.Input files for the experimental IWS network.
4.Input file for the real case study.
DOI: 10.17632/27tj2crsw7.1
title: Figures 1-3 for "Elevated levels of the sphingolipid MIPC disrupt the coordination of cell growth with cell wall formation in fission yeast"

description: Main figures 1-3 from "Elevated levels of the sphingolipid MIPC disrupt the coordination of cell growth with cell wall formation in fission yeast." The data from experiments are live-cell imaging, imaging quantification, lipodomics and yeast growth assays.
DOI: 10.17632/rvbgvrccrg.1
title: Vanheukelom2023_XRD-pattern

description: The XRD patterns of the bulk soil samples with added ZnO (10wt%).
DOI: 10.17632/yj9ww9rsw2
title: MLFWATER/fdaml

description: Date and source code for the comparative study of functional data analysis and machine learning models.
DOI: 10.17632/yj9ww9rsw2.1
title: MLFWATER/fdaml

description: Date and source code for the comparative study of functional data analysis and machine learning models.
DOI: 10.17632/j39h4fn78r.1
title: Catechins - UV spectrum

description: This dataset contains Ultraviolet (UV) spectra for catechins extracted from tea leaves, integral to a study titled "Coacervation of Double Emulsions with Anthocyanins Using Plant-Based Proteins." This study delves into the pioneering use of proteins extracted from plants to encapsulate anthocyanins within double emulsion frameworks. Catechins, the primary bioactive compounds in tea, are known for their health-promoting properties, including anti-inflammatory, antioxidant, and potential anti-carcinogenic effects.