cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/zfbbvcg4ps.4
title: Data for: Development and validation of novel scoring system for the prediction of disease recurrence following resection of colorectal liver metastasis

description: this is consisted of raw data of modeling set of coloreatal cancer liver metastasis patients.
DOI: 10.17632/zv99rs9d7k.1
title: Data for: Highly porous Co3O4 and Ni-deposited Co3O4 nanoflowers as bifunctional catalysts for oxygen reduction and evolution reactions

description: excel file of data
DOI: 10.5061/dryad.113j3h7/1
title: Stickleback genomes and annotations

description: The content of this archive is described in the README file
DOI: 10.5061/dryad.22mv245/1
title: De Petrillo & Rosati Study 1 (Fruit Preference)

description: Trial data from Study 1 (fruit preference validation). Key for variable codes included as a separate tab in the file.
DOI: 10.5061/dryad.2j87692/1
title: Goerres2019AcousticExperiment1PartA
DOI: 10.5061/dryad.2j87692/2
title: Goerres2019AcousticExperiment1PartB
DOI: 10.5061/dryad.2j87692/3
title: Goerres2019AcousticExperiment2PartA
DOI: 10.5061/dryad.4b526hv/1
title: Data
DOI: 10.5061/dryad.63cj030/2
title: Allometric Models to Estimate Leaf Area for Tropical African Broadleaved Forests

description: Destructive dataset for 61 trees on leaf area in broadleaved tropical forest.
DOI: 10.5061/dryad.7g7ff0s/2
title: PSITTACIDAE

description: PSITTACIDAE VIDEO EXAMPLES
DOI: 10.5061/dryad.7g7ff0s/3
title: PASSERINE_1_MPEG

description: Passerine video examples
DOI: 10.5061/dryad.7g7ff0s/4
title: PASSERINE_2_MPEG

description: Passerine video examples (continued)
DOI: 10.5061/dryad.7g7ff0s/5
title: OTHER_1_MPEG

description: Video examples from other avian orders
DOI: 10.5061/dryad.7g7ff0s/6
title: OTHER_2_MPEG

description: Video examples from other avian orders (continued)
DOI: 10.5061/dryad.814vb1b/1
title: Shutt_Phillimore_ProcB_Data

description: Containing blue tit phenology data from a Scottish transect, along with measures of putative predictors of phenology (temperature, tree phenology, invertebrate abundance and latitude).
DOI: 10.5061/dryad.85b47d1/1
title: Data used to perform path analysis

description: Presence/absence data of the studied species in different fallow fields, associated to the variables collected in the field and obtained from digital maps. All variables are standardized.
DOI: 10.5061/dryad.9r106tn/10
title: C. femoratus Alignment ant.1087

description: Alignment of nuclear marker "ant.1087", Camponotus femoratus
DOI: 10.5061/dryad.9r106tn/11
title: C. femoratus Alignment ant.1401

description: Alignment of nuclear marker "ant.1401", Camponotus femoratus
DOI: 10.5061/dryad.9r106tn/12
title: Chemical data from Hartke, Sprenger et al. 2019

description: This file includes compositional data for cuticular hydrocarbon profiles of Crematogaster levior and Camponotus femoratus, as well as for polar secondary metabolites of Cr. levior.
DOI: 10.5061/dryad.9r106tn/13
title: Definitions of Morphologial Traits

description: This file contains explanations how morphological measurements of Crematogaster levior and Camponotus femoratus were executed.
DOI: 10.5061/dryad.9r106tn/14
title: Crematogaster morphometry measurements

description: This file contains morphometric measurements for specimen of the two cryptic Crematogaster levior species. The abbrevations can be found in the 'Definitions of Morphological Traits' file.
DOI: 10.5061/dryad.9r106tn/15
title: Camponotus morphometry measurements

description: This file contains morphometric measurements for specimen of the two cryptic Camponotus femoratus species. The abbrevations can be found in the 'Definitions of Morphological Traits' file.
DOI: 10.5061/dryad.9r106tn/16
title: Crematogaster morphometry R script

description: This file contains a R script for the multivariate ratio analysis we conducted for Crematogaster levior.
DOI: 10.5061/dryad.9r106tn/8
title: C. femoratus Alignment ant.1

description: Alignment of nuclear marker "ant.1", Camponotus femoratus
DOI: 10.5061/dryad.9r106tn/9
title: C. femoratus Alignment ant.389

description: Alignment of nuclear marker "ant.389", Camponotus femoratus
DOI: 10.5061/dryad.9tv0342/1
title: Measures of display form and copulation success for male S. crassipes

description: This data file includes 11 measures of the courtship displays of male Schizocosa crassipes wolf spiders collected from 7 populations in the southeastern US in 2016 and 2017. There are 4 morphological measures: "MaleMassGrams" is the male's mass in grams; "CephWidthMean" is the males cephalothorax width in mm; "TuftArea" is the size of the male's tibial brush in mm^2; and "MeanTibDark.DivBy.WtStd" is the gray value of the male's tibia divided by the gray value of a white standard. There are 7 behavioral measurements: "LogLatencyToSignalSec" and "LogLatencyToBounceSec" are the log-transformed latencies (in seconds) to the male's first courtship signal and first "body bounce", respectively; "BouncesPerMin" is the number of body bounces per minute of observation; "LogMeanBounceIntervalSec" is the log-transformed mean interval (in seconds) between consecutive body bounces; "LogWaveBoutNum" is the log-transformed number of bouts of sustained leg-waving behavior; "TotalWaveDurSec" is the total duration (in seconds) of the male's leg-waving, and "LogMeanWaveDurSec" is the log-transformed mean duration (in seconds) of individual leg-waving bouts.The file also includes the outcome of the laboratory mating trial ["Copulation", 0 (no) or 1 (yes)] in which each male's courtship behavior was assayed. Each row corresponds to a mating trial. The collection year, collection site, and maturation date/age for both the male and female in each trial is included.
DOI: 10.5061/dryad.b74v55s/1
title: chemistry & microclimate

description: this excel file contain data related to the analysis of chemistry and microclimate
DOI: 10.5061/dryad.b74v55s/2
title: Pieris

description: this excel file contain data related to the developmental analysis of Pieris brassicae
DOI: 10.5061/dryad.b74v55s/3
title: Plutella

description: this excel file contain data related to the developmental analysis of Plutella xylostella
DOI: 10.5061/dryad.bg1kq06/1
title: Sequences analysed in the publication

description: Scaffolds obtained from Illumina pair-end reads and used as a query for the taxonomic assignment in the subject study.
DOI: 10.5061/dryad.j6h2852/1
title: King and Howeth Oikos 2019 Treatment Assignments

description: Dispersal and exotic Daphnia lumholtzi propagule pressure treatment assignments for each of the 48 mesocosms in the experiment. In the Dryad raw data files associated with this publication, these treatment combinations are conserved by mesocosm number.
DOI: 10.5061/dryad.j6h2852/2
title: King and Howeth Oikos 2019 Zooplankton Densities

description: Zooplankton species density (number per liter) by mesocosm and sample date.
DOI: 10.5061/dryad.j6h2852/3
title: King and Howeth Oikos 2019 Native Zooplankton Biomass

description: Native zooplankton biomass (µg per liter) by mesocosm and sample date.
DOI: 10.5061/dryad.j6h2852/4
title: King and Howeth Oikos 2019 Daphnia lumholtzi Biomass

description: Exotic Daphnia lumholtzi biomass (µg per liter) by mesocosm and sample date.
DOI: 10.5061/dryad.j6h2852/5
title: King and Howeth Oikos 2019 In Vivo Fluorescence

description: Total and edible (&lt;35µm) in vivo fluorescence by mesocosm and sample date.
DOI: 10.5061/dryad.j6h2852/6
title: King and Howeth Oikos 2019 Dissolved Oxygen

description: Dissolved oxygen (mg per L) concentrations in the morning (AM) and evening (PM) by mesocosm and sample date.
DOI: 10.5061/dryad.k82d3t3/1
title: Rcode

description: R code for analyses of bird and sedge data
DOI: 10.5061/dryad.k82d3t3/2
title: Sedge_data

description: Data on the cover of sedges (see redme.txt file for details)
DOI: 10.5061/dryad.k82d3t3/3
title: Bird_data

description: Data on bird counts in each study plot
DOI: 10.5061/dryad.k82d3t3/4
title: Sedge_dyfunction_params

description: Parameter values of fitted density-yield models for sedges
DOI: 10.5061/dryad.k82d3t3/5
title: Bird_dyfunction_params

description: Parameter estimates for bird density-yield functions
DOI: 10.5061/dryad.k82d3t3/6
title: 2014_regional_production

description: 2014 regional food production data
DOI: 10.5061/dryad.sk7fj41/1
title: widow web competition

description: Widow web competition data collected in the lab and created using R. Each row is an observation of a widow contest. Columns signify the id of web owner (focalID) and intruder (contest_ID). Behavioral data from web-building assays for both focal and intruder are included (e.g., total gumfooted lines, attack score) as well as other individual attributes: contest_black refers to whether the intruder was a black widow, 1 or brown widow, 0) , mass, logical expression if mated or not. In addition, observations scored from videos are recorded: number of bodyshakes and abdomen pulses ('abdomenpulse', 'bs.binom', 'contest_bs.binom', 'contest_abdomenpulse') produced, whether contact was made, a fight occurred, and outcome of contest (1 = focal defended web, 2 = usurped, 0 = tie). Weight difference is the difference in mass between focal and intruder.
DOI: 10.17632/75fpyzpx9v.1
title: Data for: Temperature-Related Heart Rate in Water and Air and a Comparison to Other Temperature-Related Measures of Performance in the fiddler crab Uca pugilator

description: Study of effect of temperature on heart rate of fiddler crab Leptuca pugilator on heart rate in air and water.
DOI: 10.17632/bb8px5bpj8.1
title: Data for: Forage nutritive value and fiber digestibility of Kernza intermediate wheatgrass in monoculture and in mixture with red clover
DOI: 10.17632/ktvspnhf47.1
title: Data for: A far-red Aza-crown Ether Fluorescent Probe for Selective G-quadruplex DNA Targeting

description: supporting information
DOI: 10.17632/nvpy7fmmb5.1
title: Data for: Long-term, high-intensity shading enhances triterpene production of loquat leaf through increasing foliar mineral nutrients

description: Loquat (Eriobotrya japonica Lindl.) leaves are often used as herbal or folk medicines and applied into modern pharmacology. In this study, the effect of three shading levels (control/non-shading, monolayer netting, bilayer netting) and the duration (0-88 days) on leaf gas exchange, leaf mineral nutrients, ursolic acid (UA) and oleanolic acid (OA) accumulation of loquat trees, Xinbai1, were assessed. The results indicated that UA and OA production improvement can be up to 17.20% and 9.35% respectively during bilayer netting treatments compared with control trees. Besides, a series of mixed-effect linear models with treatments and its duration as random effects revealed that leaf transpiration within crown, Ca, P and K concentrations represented the most parsimonious combination for both UA and OA, consistent with the patterns in random forest regressions. Therefore, it emphasized that shading would be the potential cultural practices for high production of UA and OA through increasing foliar mineral nutrients.
DOI: 10.17632/s4zcng7xdn.1
title: Data for: Experimental Results on a Hydrostatic Bearing Lubricated with a Magnetorheological Fluid

description: All the matlab and comsol files needed to reproduce the work presented in this paper.
DOI: 10.17632/tm2w9wf2zr.1
title: Data for: Numerical simulation of entropy generation due to natural convection heat transfer using a Kernel Derivative-Free (KDF) incompressible smoothed particle hydrodynamics (ISPH) model

description: This file contains 18 animations related to the current work as a supplementary material
DOI: 10.17632/y3dx59pfpb.1
title: Data for: Potential field continuation in spatial domain: A new kernel function and its numerical scheme

description: (1) conti2d-win10.zip includes manual, source code and pre-compiled executable file with and without GUI for Win10 system. (2) conti2d-master.zip includes manual, source code for Linux and Mac OS. (3) Tutorial_conti2d.mp4 is a video tutorial for executable program of conti2d with GUI.
DOI: 10.5061/dryad.1j43g7r/1
title: eledata_supplementary_materials

description: Data describing associations among non-musth male elephants observed in male-only groups (bull groups, or lone bulls). Elephants were assumed to be associating under the Gambit of the Group assumption, where each elephant observed in a group was assumed to be associating with each other elephant in the group. Column headers are: ID, Group_Type ("LB" = Lone Bull, "B" = "Bull group"), Datetime, sampperiod (sampling period/SP of observation), age (mean estimated age over the sampling period), and group (a numeric value indicating which group each individual was observed in).
DOI: 10.5061/dryad.1v31m0c/1
title: Behavioral response of great tits to conspecific mobbing calls

description: Data have been obtained during field work in southwest Germany outside the breeding season of great tits.
DOI: 10.5061/dryad.2j87692/4
title: Goerres2019AcousticExperiment2PartB
DOI: 10.5061/dryad.3q4g02f/1
title: BEHECO-2018-0640

description: This spreadsheet provides data for the effects of increasing levels of handicapping on parental care in the burying beetle Nicrophorus vespilloides. Each line represents a brood used in the experiment. Missing data are recorded as NA.
DOI: 10.5061/dryad.4fn50k3/1
title: Earthworm_community_dataset_JohnstonGEB

description: Earthworm community dataset, including measures of total earthworm community abundance and species richness with environmental variables across the different studies, climates and ecosystem types.
DOI: 10.5061/dryad.4fn50k3/2
title: Earthworm_data_sources

description: Article information for the studies compiled in the earthworm community dataset.
DOI: 10.5061/dryad.50q9k64/1
title: Kyogoku,Kataoka,Kondoh.2019.Evol.Ecol

description: Hand pollination experiment in the green house to observe the time from pollination to inflorescence closure, field hand pollination experiment to observe inflorescence closure induced by pollination, and the proportion of filled seeds in the field.
DOI: 10.5061/dryad.6r99k25/1
title: litter accumulation drives community changes in fenced grasslands
DOI: 10.5061/dryad.77vr729/1
title: Isotope Data

description: Isotope data for hair and food samples used in analyses.
DOI: 10.5061/dryad.84gr477/1
title: Stubbington_et_al._invertebrate_community_raw_data

description: The file includes taxon-by-sample matrices for aquatic invertebrate communities sampled from the benthic (B) and hyporheic (H) zones of each of five study rivers. The % flow intermittence (FI) is also provided.
DOI: 10.5061/dryad.9r106tn/17
title: Camponotus morphometry R script

description: This file contains a R script for the multivariate ratio analysis we conducted for Camponotus femoratus.
DOI: 10.5061/dryad.9r106tn/18
title: Morphometrics functions

description: This file contains R functions needed to conduct the multivariate ratio analyses.
DOI: 10.5061/dryad.9sj4hm8/1
title: Supplementary Figures

description: Supplementary Figures S1-S4
DOI: 10.5061/dryad.9sj4hm8/2
title: Supplementary Table S1

description: Supplementary Table S1: Location and collection information for samples included in this study
DOI: 10.5061/dryad.9sj4hm8/3
title: Supplementary Table S2

description: Supplementary Table S2: Capture efficiency and heterozygosity metrics for all loci in our novel murine rodent bait design across 35 samples
DOI: 10.5061/dryad.9sj4hm8/4
title: Supplementary Table S3

description: Supplementary Table S3: Summary of raw data and outcomes of bioinformatic processing for each sample
DOI: 10.5061/dryad.9sj4hm8/5
title: RodentV1_exoncap_target_sequences

description: Rodent v1 exon capture target sequences used for the probe design described in Roycroft et al.
DOI: 10.5061/dryad.9sj4hm8/6
title: 1245 gene alignments

description: .fasta alignments for 1245 genes
DOI: 10.5061/dryad.9sj4hm8/7
title: 1245 IQtree 100 standard bs

description: 1245 gene trees generated in IQtree with 100 standard bootstraps
DOI: 10.5061/dryad.ct8r61v/1
title: Polyandry and fecundity data

description: Data on: 1) female mating behaviour, remating, and fecundity in response to male heat-exposure; 2) male survival of heat-exposure; 3) fertility and mating capacity of heat-exposed males
DOI: 10.5061/dryad.d6q7jq2/1
title: dataset_High_pCO2_promotes_coral_reef_primary_production
DOI: 10.5061/dryad.fv3t300/1
title: Maternal and offspring lifespans

description: This file contains a row for every birth in the dataset.  For every birth, the mother is noted, the mother's age at that birth, the lifespan of the offspring born and the mother's age at her own death.
DOI: 10.5061/dryad.j2n1vq2/1
title: Barton_Leaf_Development_Defence_Syndrome_Data

description: Log response ratio data for complete meta-analysis.
DOI: 10.5061/dryad.j6h2852/7
title: King and Howeth Oikos 2019 Nutrients

description: Nutrients measured at the end of the experiment by mesocosm. Total nitrogen (TN), total dissolved nitrogen (TDN), total phosphorus (TP), and total dissolved phosphorus (TDP) concentrations reported in mg per L.
DOI: 10.5061/dryad.j6h2852/8
title: King and Howeth Oikos 2019 Temperature

description: Mesocosm water temperature (degrees Celsius) recorded every four hours by each of the two data loggers in the experiment.
DOI: 10.5061/dryad.k3t3432/1
title: Effects of hydroperiod on growth, development, survival, and immune defenses in a temperate amphibian

description: Raw data for the manuscript entitled "Effects of hydroperiod on growth, development, survival, and immune defenses in a temperate amphibian"
DOI: 10.5061/dryad.k82d3t3/7
title: 2050_scenarios

description: 2050 food production scenarios data
DOI: 10.5061/dryad.k82d3t3/8
title: Site_information

description: Information on survey sites
DOI: 10.5061/dryad.ps0qf4r/1
title: Supplementary Material

description: Supplementary Material for Graph Splitting: A Graph-Based Approach for Superfamily-scale Phylogenetic Tree Reconstruction. Figures S1–S19, Table S1, Captions for Movies S1–S2, Text S1, and References
DOI: 10.5061/dryad.ps0qf4r/2
title: Supplementary Movie S1

description: Movie S1. Movie of a 3D structural alignment of a dihydroorotate (DHO) dehydrogenase (red, 4OQV), a dihydropyrimidine (DPY) dehydrogenase (blue, 1GTE), and a glutamate synthase (green, 1EA0).
DOI: 10.5061/dryad.ps0qf4r/3
title: Supplementary Movie S2

description: Movie S2. Movie of a 3D structural alignment of a flavin oxidoreductase (group 1) (yellow, 1VHN), a DHO dehydrogenase (red, 4OQV), and a flavin oxidoreductase (group 2) (black, 1Z41).
DOI: 10.5061/dryad.qk514d2.2
title: Data from: Sexual ornaments but not weapons trade off against testes size in primates
DOI: 10.5061/dryad.qk514d2.2/1.2
title: Primate dataset

description: Data on sexual weapons and ornaments, testes size, mating system and social groups of 103 primate species
DOI: 10.5061/dryad.qk514d2.2/2.2
title: References

description: Reference associated with the primate dataset
DOI: 10.15159/phytop.22
title: Lake Peipsi 1997 (Phytoplankton samples)

description: Methods: Samples were in most cases concentrated by precipitation up to 15 ml. Count was made on striped microscope slides within volume 0,1 ml. Microscopes: MBI-3 (magnification 15x20 and 15x40) and Jenaval (7x40). Macroscopic colonies of Gloeotrichia echinulata were counted visually in 500 ml measuring cylinder.
DOI: 10.15159/phytop.23
title: Lake Peipsi 2013 (Phytoplankton samples)

description: Method: Phytoplankton samples were preserved in Lugol’s (acidified iodine) solution and counted under an inverted microscope (Utermöhl, 1958). 3 ml of preserved sample was settled overnight and counted in random fields or transects. Biovolumes of algal cells, colonies and/or filaments were calculated using assigned geometric shapes dimensions, and converted to biomass assuming the specific density of 1 g cm-3 in accordance with Edler (1979). Approved by CEN on 14 July 2006 “Water quality - Guidance standard on the enumeration of phytoplankton using inverted microscopy (Utermöhl technique)” (CEN 15204, 2006) European Standard EN 15204:2006 Utermöhl, H., 1958. Zur Vervollkommnung der quantitativen Phytoplankton-Methodik. Mitteilungen der Internationale Vereinigung für Theoretische und Angewandte Limnologie 9, 1- 38. Edler, L. (ed.), 1979. Recommendations on methods for marine biological studies in the Baltic Sea. Phytoplankton and chlorophyll. Baltic Marine Biologists WG 9.
DOI: 10.15159/phytop.24
title: Lake Peipsi 2014 (Phytoplankton samples)

description: Method: Phytoplankton samples were preserved in Lugol’s (acidified iodine) solution and counted under an inverted microscope (Utermöhl, 1958). 3 ml of preserved sample was settled overnight and counted in random fields or transects. Biovolumes of algal cells, colonies and/or filaments were calculated using assigned geometric shapes dimensions, and converted to biomass assuming the specific density of 1 g cm-3 in accordance with Edler (1979). Approved by CEN on 14 July 2006 “Water quality - Guidance standard on the enumeration of phytoplankton using inverted microscopy (Utermöhl technique)” (CEN 15204, 2006) European Standard EN 15204:2006 Utermöhl, H., 1958. Zur Vervollkommnung der quantitativen Phytoplankton-Methodik. Mitteilungen der Internationale Vereinigung für Theoretische und Angewandte Limnologie 9, 1- 38. Edler, L. (ed.), 1979. Recommendations on methods for marine biological studies in the Baltic Sea. Phytoplankton and chlorophyll. Baltic Marine Biologists WG 9.
DOI: 10.17632/4fn9d2rdgb.1
title: Data for: SSChain: A Full Sharding Protocol for Public Blockchain without Data Migration Overhead

description: The result that run under different number of shards.
DOI: 10.17632/589trzw5dr.1
title: Data for: PERCEIVED PHYSICAL EXERTION IS A GOOD INDICATOR OF NEUROMUSCULAR FATIGUE OF THE CORE MUSCLES

description: EMG RMS, EMG median frequency, RPE and angle pelvis values.
DOI: 10.17632/6svb4zn543.1
title: Data for: Is Ammonia Excretion Affected by Gill Ventilation in the Rainbow Trout Oncorhynchus mykiss?

description: Prepared paper for Respiratory Physiology & Neuroscience
DOI: 10.17632/h92jsp3bxc.1
title: Removal of boron and silicon by a modified resin and their competitive adsorption mechanisms
DOI: 10.17632/jh24sx3kxr.1
title: Data and Materials for: Preparedness Increases Confidence in Any Accessible Thoughts Affecting Evaluations Unrelated to the Original Domain of Preparation

description: Data and Materials for Studies 1, 2, & 3
DOI: 10.5061/dryad.3mq4631/1
title: Brook trout clone filtered

description: Clone filtered VCF file of brook trout genotype data. VCF files were generated using stacks 2.46 with minimal filters (STACKS flags = -r 0.3, --min_maf 0.05). Data was generated using the SbfI enzyme, methods outlined in Ali et al. (2016)and prepared in the Genomic Variation Lab at the University of California--Davis and sequenced on Illumina NextSeq 500 (PE 75 bp reads, 96 samples/lane) at the Cornell Institute of Biotechnology.
DOI: 10.5061/dryad.3mq4631/2
title: Brook trout unfiltered

description: Non-clone filtered (unfiltered) VCF file of brook trout genotype data. VCF files were generated using stacks 2.46 with minimal filters (STACKS flags = -r 0.3, --min_maf 0.05). Data was generated using the SbfI enzyme, methods outlined in Ali et al. (2016)and prepared in the Genomic Variation Lab at the University of California--Davis and sequenced on Illumina NextSeq 500 (PE 75 bp reads, 96 samples/lane) at the Cornell Institute of Biotechnology
DOI: 10.5061/dryad.3mq4631/3
title: Cisco clone filtered

description: Clone filtered (filtered) VCF file of cisco genotype data. VCF files were generated using stacks 2.46 with minimal filters (STACKS flags = -r 0.3, --min_maf 0.05). Data generated using the SbfI enzyme, methods outlined in Ali et al. (2016) prepared in the Larson Laboratory at the University of Wisconsin-Stevens Point and sequenced on a HiSeq 4000 (PE 150bp reads, 96 samples/lane) at the Michigan State Genomics Core Facility.