cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/ppdscsr7j5
title: Instances for the Two-Dimensional guillotine Bounded-Sized Cutting Stock Problem (2D-BSCSP)

description: Full description of instances for the Two-Dimensional guillotine Bounded-Sized Cutting Stock Problem (2D-BSCSP). 

The 2D-BSCSP is a new variant of the 2D-CSP in which stocks of flexible (bounded) sizes are available, as described in the research article titled "A large neighborhood search matheuristic for the two-dimensional guillotine bounded-sized cutting stock problem" (Hadj Salem and Robbes, 2025).
The 2D-BSCSP was formulated as item-based, strip-based, and pattern-based models and solved using a LNS matheuristic.

Two classes of instances were considered: “Small” and “Large”.
- The “Small” class comprises a total of 320 instances, which are divided into two subsets: “Variable-sized plates” and “Bounded-sized plates”.
- The “Large” class comprises only 160 “Bounded-sized plates” instances.

The format of an instance can be defined as follows: PS-%H-%W-N-D-V, where:
- PS : is the “plate shape” H^(ub) × W^(ub), i.e., R means “Rectangular” (500 × 1000);
- %H : is the % of H^(lb) relative to H^(ub) ; 
- %W : is the % of W^(lb) relative to W^(ub) ;
- N : is the number of item types I;
- D : is the total item types' demand, sum ( i∈I) d_i;
- V : is the “version” (seed).

The different characteristics of these instances are detailed in the file “instances_characteristics.csv”.
DOI: 10.17632/ppdscsr7j5.3
title: Instances for the Two-Dimensional guillotine Bounded-Sized Cutting Stock Problem (2D-BSCSP)

description: Full description of instances for the Two-Dimensional guillotine Bounded-Sized Cutting Stock Problem (2D-BSCSP). 

The 2D-BSCSP is a new variant of the 2D-CSP in which stocks of flexible (bounded) sizes are available, as described in the research article titled "A large neighborhood search matheuristic for the two-dimensional guillotine bounded-sized cutting stock problem" (Hadj Salem and Robbes, 2025).
The 2D-BSCSP was formulated as item-based, strip-based, and pattern-based models and solved using a LNS matheuristic.

Two classes of instances were considered: “Small” and “Large”.
- The “Small” class comprises a total of 320 instances, which are divided into two subsets: “Variable-sized plates” and “Bounded-sized plates”.
- The “Large” class comprises only 160 “Bounded-sized plates” instances.

The format of an instance can be defined as follows: PS-%H-%W-N-D-V, where:
- PS : is the “plate shape” H^(ub) × W^(ub), i.e., R means “Rectangular” (500 × 1000);
- %H : is the % of H^(lb) relative to H^(ub) ; 
- %W : is the % of W^(lb) relative to W^(ub) ;
- N : is the number of item types I;
- D : is the total item types' demand, sum ( i∈I) d_i;
- V : is the “version” (seed).

The different characteristics of these instances are detailed in the file “instances_characteristics.csv”.
DOI: 10.17632/r9c5ns4jft.3
title: Lipid-induced granule assembled by DDX49 in hepatocytes restrains liver fibrosis

description: Original raw data for“Lipid-induced granule assembled by DDX49 in hepatocytes restrains liver fibrosis”
DOI: 10.15468/dl.zc7jsg
title: Occurrence Download

description: A dataset containing 1288 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombina variegata variegata"
 ]
}

 The dataset includes 1288 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012948-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/ry37spbxzw
title: Wind Speed Dataset of Mannjing

description: Wind power sample data of Manjing Wind Farm, Shangyi County, Zhangjiakou City, Hebei Province, China in 2013. The Manjing Wind Farm has 122 wind turbines with a single capacity of 2.5 MW and a total capacity of 305 MW. All data in this article are from the same wind turbine No. 10.
DOI: 10.17632/ry37spbxzw.1
title: Wind Speed Dataset of Mannjing

description: Wind power sample data of Manjing Wind Farm, Shangyi County, Zhangjiakou City, Hebei Province, China in 2013. The Manjing Wind Farm has 122 wind turbines with a single capacity of 2.5 MW and a total capacity of 305 MW. All data in this article are from the same wind turbine No. 10.
DOI: 10.17632/6bvcmggy99
title: C8orf33 dictates DNA double-strand break repair choice by modulating KAT8-mediated H4K16 acetylation

description: Homologous recombination (HR) and non-homologous end joining (NHEJ) are two main repair pathways of DNA double-strand breaks (DSBs). The regulation of repair pathway choice is crucial for maintaining genomic stability and preventing carcinogenesis. Consequently, there is increasing interest in elucidating the molecular mechanisms that govern DSB repair pathway selection. Here, we identify chromosome 8 open reading frame 33 (C8orf33) as a novel regulator of DSB repair choice. We show that C8orf33 is a nuclear protein localized predominantly to the nucleolus and is recruited to DSB sites within both nuclear and nucleolar regions. We demonstrate that C8orf33 promotes the recruitment of 53BP1, thus channeling DSB repair toward NHEJ. Consequently, C8orf33 inhibits DNA end resection and counteracts the recruitment of HR factors, BRCA1 and RAD51, to DSB sites. Mechanistically, chromatin profiling analysis reveals that C8orf33 antagonizes the chromatin association of KAT8 acetyltransferase at DSB sites leading to reduced histone 4 lysine 16 acetylation (H4K16ac) levels. Accordingly, the loss of C8orf33 enhances KAT8 chromatin binding that increases H4K16ac levels. This promotes the recruitment of HR factors while suppressing the accumulation of NHEJ factors at DSB sites, thereby favoring HR over NHEJ. Additionally, we demonstrate that the elevated HR activity in C8orf33-deficient cells causes genomic instability, as evidenced by accelerated loss of ribosomal DNA repeats and increases cell death. Collectively, our findings establish C8orf33 as a critical regulator of DSB repair pathway choice, safeguarding genomic integrity.
DOI: 10.17632/6bvcmggy99.1
title: C8orf33 dictates DNA double-strand break repair choice by modulating KAT8-mediated H4K16 acetylation

description: Homologous recombination (HR) and non-homologous end joining (NHEJ) are two main repair pathways of DNA double-strand breaks (DSBs). The regulation of repair pathway choice is crucial for maintaining genomic stability and preventing carcinogenesis. Consequently, there is increasing interest in elucidating the molecular mechanisms that govern DSB repair pathway selection. Here, we identify chromosome 8 open reading frame 33 (C8orf33) as a novel regulator of DSB repair choice. We show that C8orf33 is a nuclear protein localized predominantly to the nucleolus and is recruited to DSB sites within both nuclear and nucleolar regions. We demonstrate that C8orf33 promotes the recruitment of 53BP1, thus channeling DSB repair toward NHEJ. Consequently, C8orf33 inhibits DNA end resection and counteracts the recruitment of HR factors, BRCA1 and RAD51, to DSB sites. Mechanistically, chromatin profiling analysis reveals that C8orf33 antagonizes the chromatin association of KAT8 acetyltransferase at DSB sites leading to reduced histone 4 lysine 16 acetylation (H4K16ac) levels. Accordingly, the loss of C8orf33 enhances KAT8 chromatin binding that increases H4K16ac levels. This promotes the recruitment of HR factors while suppressing the accumulation of NHEJ factors at DSB sites, thereby favoring HR over NHEJ. Additionally, we demonstrate that the elevated HR activity in C8orf33-deficient cells causes genomic instability, as evidenced by accelerated loss of ribosomal DNA repeats and increases cell death. Collectively, our findings establish C8orf33 as a critical regulator of DSB repair pathway choice, safeguarding genomic integrity.
DOI: 10.17632/646252vs34
title: oropharyngeal swabs 16S rRNA sequencing from PDAC/control
DOI: 10.17632/646252vs34.1
title: oropharyngeal swabs 16S rRNA sequencing from PDAC/control
DOI: 10.17632/6jmbn54j6c
title: Drought asymmetrically amplifies the lagged and cumulative vegetation productivity responses to soil and atmospheric droughts, stronger for vapor pressure deficit

description: All the data serving the paper "Drought asymmetrically amplifies the lagged and cumulative vegetation productivity responses to soil and atmospheric droughts, stronger for vapor pressure deficit".
DOI: 10.17632/6jmbn54j6c.1
title: Drought asymmetrically amplifies the lagged and cumulative vegetation productivity responses to soil and atmospheric droughts, stronger for vapor pressure deficit

description: All the data serving the paper "Drought asymmetrically amplifies the lagged and cumulative vegetation productivity responses to soil and atmospheric droughts, stronger for vapor pressure deficit".
DOI: 10.17632/8p7k6htgfm
title: single-nucleus RNA-seq and spatial transcriptomics data of human white adipose tissue across five depots

description: This repository contains sequencing data from the publication by Jalkanen and Zhong et al., “Cytoarchitectural Profiling of White Adipose Tissue Depots Links Serum Amyloid A–Expressing Adipocytes to Immune Cell Activation.” It provides transcriptomic resources from five human white adipose tissue depots: subcutaneous, omental, mesenteric, mesocolic, and epiploic.

The repository includes:

1. 10x 3’ single-nucleus RNA-seq data provided by Seurat object.

2. Spatial transcriptomics (Visium) data also provided as Seurat object.

3. Bulk RNA-seq expression matrices from adipose tissue samples under SAA1 and LPS stimulation.
DOI: 10.17632/8p7k6htgfm.1
title: single-nucleus RNA-seq and spatial transcriptomics data of human white adipose tissue across five depots

description: This repository contains sequencing data from the publication by Jalkanen and Zhong et al., “Cytoarchitectural Profiling of White Adipose Tissue Depots Links Serum Amyloid A–Expressing Adipocytes to Immune Cell Activation.” It provides transcriptomic resources from five human white adipose tissue depots: subcutaneous, omental, mesenteric, mesocolic, and epiploic.

The repository includes:

1. 10x 3’ single-nucleus RNA-seq data provided by Seurat object.

2. Spatial transcriptomics (Visium) data also provided as Seurat object.

3. Bulk RNA-seq expression matrices from adipose tissue samples under SAA1 and LPS stimulation.
DOI: 10.17632/6kxnhc2g73
title: Research Data for "Internally consistent P-V-T EOSs among Pt, Au and MgO"

description: This is the supporting material for the article "Internally consistent P-V-T EOSs among Pt, Au and MgO". It includes data set and matlab scripts used for EOSs optimization, the matlab scripts for thermodynamics properties calculation, and python scripts to calculate the pressure from the volume and temperature.
DOI: 10.17632/6kxnhc2g73.2
title: Research Data for "Internally consistent P-V-T EOSs among Pt, Au and MgO"

description: This is the supporting material for the article "Internally consistent P-V-T EOSs among Pt, Au and MgO". It includes data set and matlab scripts used for EOSs optimization, the matlab scripts for thermodynamics properties calculation, and python scripts to calculate the pressure from the volume and temperature.
DOI: 10.17632/xz3tmfj7tz
title: Real-world evaluation of bimekizumab in patients with moderate-to-severe hidradenitis suppurativa: A nationwide retrospective cohort study on behalf of the HS-SIDeMaST task force - Supplementary Materials

description: Supplementary material
Supplementary Material 1: Statistical methods
Supplementary Material 2 - Table 1: Data stratified according to bimekizumab dose regimen
Supplementary Material 3 - Table 2: Data stratified according to bimekizumab bio-naïve status
Supplementary Material 4 - Figure 1: A 67-year-old woman with long-standing hidradenitis suppurativa, refractory to adalimumab, was switched to bimekizumab. (A) (C) show the baseline clinical presentation prior to bimekizumab initiation, with numerous draining fistulous lesions and severe skin pain. (B) (D) demonstrate the marked clinical improvement achieved after 36 weeks of treatment, characterised by a substantial reduction in purulent discharge and an overall improvement in patient-reported quality of life scores.
DOI: 10.17632/xz3tmfj7tz.3
title: Real-world evaluation of bimekizumab in patients with moderate-to-severe hidradenitis suppurativa: A nationwide retrospective cohort study on behalf of the HS-SIDeMaST task force - Supplementary Materials

description: Supplementary material
Supplementary Material 1: Statistical methods
Supplementary Material 2 - Table 1: Data stratified according to bimekizumab dose regimen
Supplementary Material 3 - Table 2: Data stratified according to bimekizumab bio-naïve status
Supplementary Material 4 - Figure 1: A 67-year-old woman with long-standing hidradenitis suppurativa, refractory to adalimumab, was switched to bimekizumab. (A) (C) show the baseline clinical presentation prior to bimekizumab initiation, with numerous draining fistulous lesions and severe skin pain. (B) (D) demonstrate the marked clinical improvement achieved after 36 weeks of treatment, characterised by a substantial reduction in purulent discharge and an overall improvement in patient-reported quality of life scores.
DOI: 10.17632/zcd62tfs44
title: Raw data on friction of synthetic olivine-antigorite gouge

description: This dataset comprises the raw experimental data supporting the research article "Mature serpentinized faults cannot host depth-dependent slow earthquakes". The data were obtained from a suite of 11 friction experiments conducted on synthetic fault gouges composed of antigorite and olivine mixtures, with compositions ranging from 0 to 100 vol.% antigorite. All experiments were performed under constant hydrothermal conditions: 500 °C, 150 MPa confining pressure, and 100 MPa pore fluid pressure. The data are provided in ASCII/text format and include time, axial displacement, axial load, and so on. These raw data are the foundation for calculating the friction coefficient, identifying slow stick-slip events, and analyzing the frictional stability parameters (e.g., (a-b)) as a function of composition.
DOI: 10.17632/zcd62tfs44.1
title: Raw data on friction of synthetic olivine-antigorite gouge

description: This dataset comprises the raw experimental data supporting the research article "Mature serpentinized faults cannot host depth-dependent slow earthquakes". The data were obtained from a suite of 11 friction experiments conducted on synthetic fault gouges composed of antigorite and olivine mixtures, with compositions ranging from 0 to 100 vol.% antigorite. All experiments were performed under constant hydrothermal conditions: 500 °C, 150 MPa confining pressure, and 100 MPa pore fluid pressure. The data are provided in ASCII/text format and include time, axial displacement, axial load, and so on. These raw data are the foundation for calculating the friction coefficient, identifying slow stick-slip events, and analyzing the frictional stability parameters (e.g., (a-b)) as a function of composition.
DOI: 10.17632/k75jk9gscv
title: Dataset for: Dung fungal spore diversity as palaeoecological indicator of grazing: case study Reiherbachtal (Naturpark Solling-Vogler), Germany

description: This dataset contains the counting data and images of spores for the manuscript: "Dung fungal spore diversity as palaeoecological indicator of grazing: case study Reiherbachtal (Naturpark Solling-Vogler), Germany." by Dippon and Shumilovskikh. The study investigated on dung fungal diversity in different substrates, in order to evaluate the use of dung fungal spores for the reconstruction of grazing.
DOI: 10.17604/p90e-9d98
title: Dataset for the study: Semi-structured interviews focused on the communicative experiences of Black women with postpartum depression 

description: This dataset contains de-identified transcriptions, the interview guide, and demographic data of participants. Between 13 October 2022 - 10 April 2023, fifteen individual semi-structured interviews were conducted with Black women about their experiences with postpartum depression. The women were residents in Miami-Dade, FL. Each interview is separated with the words "End of Audio_Transcription for Participant #]. The transcriptions include participants providing verbal consent and responses to questions on how they disclosed their postpartum depression diagnosis to their support system, the type of support they received, how they communicated with their support system and how that system communicated with them. Additionally, the women were asked about their perceptions of how culture influenced how their support system communicated with them and how they communicated with their system about their diagnosis. The interview guide for this study is located in the file named Interview Guide_Black_Women_Postpartum Depression. The transcriptions have been de-identified to protect patient identity and the sensitivity of the content. This means that any information regarding the women's names, area of residence, places of hospitalization were omitted from the data. Redacted sections were indicated by the use of the word, "de-identified" and square brackets e.g., [de-identified]. To maintain patient privacy, full access to transcriptions will be limited. Demographic data for the participants are in the file Demographics_DataSet_BlackWomen_Postpartum Depression.csv.
DOI: 10.17632/k75jk9gscv.1
title: Dataset for: Dung fungal spore diversity as palaeoecological indicator of grazing: case study Reiherbachtal (Naturpark Solling-Vogler), Germany

description: This dataset contains the counting data and images of spores for the manuscript: "Dung fungal spore diversity as palaeoecological indicator of grazing: case study Reiherbachtal (Naturpark Solling-Vogler), Germany." by Dippon and Shumilovskikh. The study investigated on dung fungal diversity in different substrates, in order to evaluate the use of dung fungal spores for the reconstruction of grazing.
DOI: 10.17632/b623hs878j
title: Dataset to accompany paper: "Can battery deployment avoid network reinforcement in an unbundled electricity system? A Great Britain case study"

description: This dataset accompanies manuscript entitled "Can battery deployment avoid network reinforcement in an unbundled electricity system? A Great Britain case study". 
The research is in the context of a recognised need for flexible resources on Great Britain (GB)'s electricity system, as greater penetrations of less flexible or inflexible generation are deployed to aid system decarbonisation. The work explores research questions: 
"Will deployment of battery energy storage, engaged in wholesale trading, reduce peak flows across Great Britain’s electrical networks, and thus reduce or defer the need for network reinforcement?
Or, conversely, might deployment of batteries add to maximum network flows and reinforcement needs?"

The data are arranged in folders which follow the structure of the manuscript. All folders and subfolders contain "read_me" text files with more information about data themselves, their sources and their interpretation. All data were sourced from open sources or were created as part of the research. 
Folder 1 has data for auction prices of frequency regulation and response services procured by the Electricity System Operator during 2022, which show a decline in prices in the later part of the year. In these circumstances, alternative activities were becoming more attractive for battery owners. 
Folder 2 contains timeseries data for wholesale trading and Balancing Mechanism activity during 2022 of around 20 commercial batteries active in GB's Balancing Mechanism. These datasets illustrate increasing interest in wholesale trading during the year. 
Folder 3 contains data relating to a battery simulation model created for this research, and its outputs. The model simulates a battery agent, engaged in wholesale trades (i.e. arbitrage), and intent on accruing maximum overall net revenues. It contains the day-ahead spot market price data used in this work (during selected periods during 2022), model outputs for the most lucrative battery simulations, including timeseries of simulated charging and discharging activity. These timeseries are later used together with other data to assess the effect of battery activity on distribution and transmission network congestion. 
Folder 4 has data for the distribution network case study. It contains data relating to the topology and thermal limits of the networks studied, timeseries of demands and distributed wind generator outputs, used to calculate aggregated flows on 33kV networks, and then the effect of simulated battery activity on these flows. 
Folder 5 accompanies the transmission network study. It contains timeseries data of wind generation availability and curtailment, in Scotland, which are viewed together with simulated battery activity to determine batteries' likely effect on transmission congestion. 
Folder 6 contains timeseries of GB system demand, and of embedded solar and wind generation from the ESO, which the manuscript's Discussion section refers to.