cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24849690
title: HyperDC Figure 5: Viscoelasticity of HL60 cells with Latrunculin B and Nocodazole treatment

description: This dataset contains the raw measurement data for the measurements on HL60 cells with Latrunculin B and Nocodazole treatment in Reichel et al. "High-throughput viscoelastic characterization of cells in hyperbolic microchannels" (Fig. 5E-G), https://www.biorxiv.org/content/10.1101/2023.12.10.571005
DOI: 10.6084/m9.figshare.24849690.v3
title: HyperDC Figure 5: Viscoelasticity of HL60 cells with Latrunculin B and Nocodazole treatment

description: This dataset contains the raw measurement data for the measurements on HL60 cells with Latrunculin B and Nocodazole treatment in Reichel et al. "High-throughput viscoelastic characterization of cells in hyperbolic microchannels" (Fig. 5E-G), https://www.biorxiv.org/content/10.1101/2023.12.10.571005
DOI: 10.6084/m9.figshare.24849690.v2
title: HyperDC Figure 5: Viscoelasticity of HL60 cells with Latrunculin B and Nocodazole treatment

description: This dataset contains the raw measurement data for the measurements on HL60 cells with Latrunculin B and Nocodazole treatment in Reichel et al. "High-throughput viscoelastic characterization of cells in hyperbolic microchannels" (Fig. 5E-G), https://www.biorxiv.org/content/10.1101/2023.12.10.571005
DOI: 10.6073/pasta/8b6eab31da8a45e6bc82f02d899f63ff
title: Adirondack Public Good Events Database: Natural Resource, Environmental, Economic and Recreation Policy and Common Pool Resources for a Social-Ecological System in Adirondack Park, New York, USA, 1760-2020.

description: I assembled this dataset from various published sources to evaluate how the social-ecological system (SES) in Adirondack Park, New York changed through time and the interplay of public goods (Common Pool Resources, CPRs), public land rules and private land rights, and related concepts over 260 years (1760-2020). The database was the basis for a doctoral dissertation titled "Blue Lining: Assessing the Resilience of Adirondack Park, New York Using Polycentricity and Panarchy Frameworks." The goal of the dissertation was to assess patterns and changes in institutional rules, actors and arrangements before and after establishment of the public Adirondack Forest Preserve in 1885 and Adirondack Park in 1892 as those actors and rules were modified and as both internal and external events influenced the SES as it moved through different phases of the adaptive cycle through space and time (see panarchy). Using the database, I identified which organizations and events contributed to natural resource and CPR policy. The dissertation can be downloaded here: https://experts.esf.edu/esploro/outputs/99917370604826.
DOI: 10.18112/openneuro.ds004873.v1.0.4
title: Two distinct modes of hemodynamic responses in the human brain
DOI: 10.26275/73j6-8nej
title: Michigan High Res EEG - UMHS 0022

description: Scalp and stereotactic EEG for UMHS0022. Class I outcome
DOI: 10.6084/m9.figshare.22639981
title: Visual guidance fine-tunes probing movements of an insect appendage

description: The RawData contains an "info" file with information on the folder content, as well as the variables within the data structures.The AUGEN file contains the microscope images of the eyes of all hawkmoths that participated in the eye painting experiment.
DOI: 10.5281/zenodo.10402599
title: Raw Data_Bioenergetics of human spermatozoa in patients with testicular germ cell tumour
DOI: 10.5281/zenodo.10402600
title: Raw Data_Bioenergetics of human spermatozoa in patients with testicular germ cell tumour
DOI: 10.6084/m9.figshare.24851529
title: <b>Micro Rain Radar and Radiometric Measurements to Unravel Contrasting Features of Rain Microstructure below and above the Boundary Layer</b>

description: · Mean drop diameter and parameters of the gamma model show opposite variation with rain rates below and above the boundary layer.· Enhanced drop breakup due to instabilities and wind shear above the boundary layer during intense convection causes such anomalies.· It is critical that radar quantitative precipitation estimation algorithm accounts for the type of rain namely Convective and Stratiform.
DOI: 10.26275/s3jn-eo59
title: Michigan High Res EEG - UMHS 0023

description: Scalp, intracranial grid, and standard depth EEG for UMHS0023. Neuropace placed.
DOI: 10.6084/m9.figshare.23941322
title: The British Ixworth: individual growth and egg production of a purebred dual-purpose chicken

description: 1. Killing male one-day-old chicks, especially from layer lines, is banned in some European countries. Therefore, dual-purpose chickens, where each sex is used for meat and egg production, respectively, offer an alternative production solution. This study evaluated the British purebred breed Ixworth as a dual-purpose chicken for meat and egg production. 2. Ixworth chicks (<i>n</i> = 167) were hatched and reared mixed-sex in a floor housing system, with two groups receiving a commercial pullet diet (treatment 1) and two groups receiving a diet composed for males of layer lines (treatment 2). Individual chick performance data were recorded. Males were slaughtered at 12 weeks of age, and their growth rate and carcase variables were analysed. All hens were continuously reared on the pullet diet and kept in a free-range system from 20 weeks old for one laying period (52 weeks). In addition, group-based feed consumption and mortality were recorded. 3. Cockerels in treatment 1 and 2 showed significantly different [T(88) = −2.846, <i>P</i> = 0.003] growth rates (25.3 <i>vs</i>. 27.4 g/day) and average final weights (2166 g <i>vs</i>. 2344 g). The hens in treatment 1 (<i>n</i> = 41) laid an average of 193 eggs per hen housed (mean egg weight: 56.9 g), whereas those in treatment 2 (<i>n</i> = 35) laid 195 eggs per hen housed (mean egg weight: 56.5 g). Nest acceptance was &gt;97.5% and feed consumption was up to 140 g/bird/day. 4. The results showed that the Ixworth may be a suitable breed for dual-purpose use and could be improved through selective breeding, offering potential for preservation of this local breed as well as general biodiversity in poultry farming.
DOI: 10.6084/m9.figshare.23941322.v2
title: The British Ixworth: individual growth and egg production of a purebred dual-purpose chicken

description: 1. Killing male one-day-old chicks, especially from layer lines, is banned in some European countries. Therefore, dual-purpose chickens, where each sex is used for meat and egg production, respectively, offer an alternative production solution. This study evaluated the British purebred breed Ixworth as a dual-purpose chicken for meat and egg production. 2. Ixworth chicks (<i>n</i> = 167) were hatched and reared mixed-sex in a floor housing system, with two groups receiving a commercial pullet diet (treatment 1) and two groups receiving a diet composed for males of layer lines (treatment 2). Individual chick performance data were recorded. Males were slaughtered at 12 weeks of age, and their growth rate and carcase variables were analysed. All hens were continuously reared on the pullet diet and kept in a free-range system from 20 weeks old for one laying period (52 weeks). In addition, group-based feed consumption and mortality were recorded. 3. Cockerels in treatment 1 and 2 showed significantly different [T(88) = −2.846, <i>P</i> = 0.003] growth rates (25.3 <i>vs</i>. 27.4 g/day) and average final weights (2166 g <i>vs</i>. 2344 g). The hens in treatment 1 (<i>n</i> = 41) laid an average of 193 eggs per hen housed (mean egg weight: 56.9 g), whereas those in treatment 2 (<i>n</i> = 35) laid 195 eggs per hen housed (mean egg weight: 56.5 g). Nest acceptance was &gt;97.5% and feed consumption was up to 140 g/bird/day. 4. The results showed that the Ixworth may be a suitable breed for dual-purpose use and could be improved through selective breeding, offering potential for preservation of this local breed as well as general biodiversity in poultry farming.
DOI: 10.6084/m9.figshare.24182400
title: Identification and functional analysis of <i>circRIPK2</i> in lipopolysaccharide induced chicken macrophages

description: 1. It was hypothesised that a circular <i>RIPK2</i> (<i>circRIPK2</i>) highly expressed in chicken macrophages plays an important role during bacterial infection. 2. After PCR amplification, Sanger sequencing and RNase R exonuclease treatment of chicken macrophages, it was found that <i>circRIPK2</i> was a stable circular RNA, which was formed by reverse splicing of exons 4 to 9 of the <i>RIPK2</i>. 3. The <i>circRIPK2</i> can promote the lipopolysaccharide (LPS) induced cellular injury by reducing cell viability and increasing the expression of pro-inflammatory cytokines and apoptosis genes. 4. Six miRNAs were identified as interacting with <i>circRIPK2</i>, potentially targeting 1,817 genes, which were significantly enriched in the Wnt signalling pathway, adherens junction and NOD-like receptor signalling pathway. 5. This study provides better understanding of the function of <i>circRIPK2</i>, which may prove a potential biomarker and indicate potential targets for the treatment of bacterial infection.
DOI: 10.6084/m9.figshare.24182400.v2
title: Identification and functional analysis of <i>circRIPK2</i> in lipopolysaccharide induced chicken macrophages

description: 1. It was hypothesised that a circular <i>RIPK2</i> (<i>circRIPK2</i>) highly expressed in chicken macrophages plays an important role during bacterial infection. 2. After PCR amplification, Sanger sequencing and RNase R exonuclease treatment of chicken macrophages, it was found that <i>circRIPK2</i> was a stable circular RNA, which was formed by reverse splicing of exons 4 to 9 of the <i>RIPK2</i>. 3. The <i>circRIPK2</i> can promote the lipopolysaccharide (LPS) induced cellular injury by reducing cell viability and increasing the expression of pro-inflammatory cytokines and apoptosis genes. 4. Six miRNAs were identified as interacting with <i>circRIPK2</i>, potentially targeting 1,817 genes, which were significantly enriched in the Wnt signalling pathway, adherens junction and NOD-like receptor signalling pathway. 5. This study provides better understanding of the function of <i>circRIPK2</i>, which may prove a potential biomarker and indicate potential targets for the treatment of bacterial infection.
DOI: 10.6084/m9.figshare.24848316
title: <b>Fan_etal_OtterFightData_Appendix</b>

description: These are the supplementary materials for a study of smooth-coated otters' intraspecific agonistic interactions in Singapore's urban matrix.
DOI: 10.6084/m9.figshare.24848316.v2
title: <b>Fan_etal_OtterFightData_Appendix</b>

description: These are the supplementary materials for a study of smooth-coated otters' intraspecific agonistic interactions in Singapore's urban matrix.
DOI: 10.6084/m9.figshare.24848316.v3
title: <b>Fan_etal_OtterFightData_Appendix</b>

description: These are the supplementary materials for a study of smooth-coated otters' intraspecific agonistic interactions in Singapore's urban matrix.
DOI: 10.26275/jkbj-f3bn
title: Michigan High Res EEG - UMHS 0028

description: Scalp, intracranial grid, and standard depth EEG for Michigan Patient 28. Class I outcome
DOI: 10.5281/zenodo.8017891
title: Data files for Sheehan et al. 2023 'City Scale Traffic Monitoring Using WorldView Satellite Imagery and Deep Learning: A Case Study of Barcelona'  DOI: https://doi.org/10.3390/rs15245709

description: Data files for Sheehan et al. (2023) City Scale Traffic Monitoring Using WorldView Satellite Imagery and Deep Learning: A Case Study of Barcelona. Remote Sensing. 15(24) DOI: https://doi.org/10.3390/rs15245709

Description of contents: 

xView-YOLOv3_Model6_Barcelona_weights.pt

This file contains the pre-trained weights for the xView-YOLOv3 model (model code available here: https://github.com/ultralytics/xview-yolov3). These weights were trained on a manually created training data set of vehicles present in WorldView 2/3 imagery covering the city of Barcelona. The weights relate to Model 6 set up: a single vehicle class (parked, static and moving), RGB imagery, Barcelona training data set derived anchor boxes, 1500 x 1500 pixel sized images and to 1000 epochs.
DOI: 10.26275/pmnr-f6br
title: Michigan High Res EEG - UMHS0018

description: Michigan High Res EEG database
description: Scalp and stereotactic EEG for UMHS0018. Class Ib outcome
DOI: 10.5281/zenodo.8017890
title: Data files for Sheehan et al. 2023 'City Scale Traffic Monitoring Using WorldView Satellite Imagery and Deep Learning: A Case Study of Barcelona'  DOI: https://doi.org/10.3390/rs15245709

description: Data files for Sheehan et al. (2023) City Scale Traffic Monitoring Using WorldView Satellite Imagery and Deep Learning: A Case Study of Barcelona. Remote Sensing. 15(24) DOI: https://doi.org/10.3390/rs15245709

Description of contents: 

xView-YOLOv3_Model6_Barcelona_weights.pt

This file contains the pre-trained weights for the xView-YOLOv3 model (model code available here: https://github.com/ultralytics/xview-yolov3). These weights were trained on a manually created training data set of vehicles present in WorldView 2/3 imagery covering the city of Barcelona. The weights relate to Model 6 set up: a single vehicle class (parked, static and moving), RGB imagery, Barcelona training data set derived anchor boxes, 1500 x 1500 pixel sized images and to 1000 epochs.
DOI: 10.6084/m9.figshare.24851748
title: EEG data MiEEG data Mirror Visual Feedback with electrical painful and non-painful stimulationsrror Visual Feedback with electrical painful and non-painful stimulations

description: Experimental procedure:The participants were comfortably seated on a chair with their arms lying symmetrically ahead on a table. Auditory cues of 70 dB, 1000 Hz, and 50 ms of duration (Kida et al., 2006) were used to trigger right index finger movements. All the subjects underwent three different conditions (80 trials each) in randomized order. Each condition lasted approx. 13 min with 10 min breaks between the conditions. The whole session – including EEG net preparation, training, pain threshold measurement, and experiment – lasted approx. 2.5 hours. In the experimental condition (Unilateral with Mirror, or UM+), the mirror was placed on the desk, perpendicularly to the subjects’ midsagittal plane with the reflecting face on the right side (Figure 1). Subjects were instructed to move the right index finger in response to the auditory cue while watching the image of the reflected moving hand in the mirror to give the illusion of the simultaneous left index finger movement. The position of the left hand behind the mirror corresponded to the image of the left hand reflected in the mirror. In the control conditions, the mirror was removed from the experimental setting and the left hand was directly visible to the participants. In one control condition (Unilateral without Mirror, UM-), subjects were asked to perform the same unilateral right index finger movements. In the other control condition (Bilateral without Mirror, BM-), subjects had to perform synchronous movements of both index fingers. The movements consisted of a double extension of the index finger with a slow release toward the bottom (approx. 1 s). All the participants received a brief training to perform the movement correctly and keep the left hand as still as possible during the unilateral conditions. In each condition, an electrical stimulus was delivered on the tip of the left index finger 100 ms after the auditory cue to induce cortical sensory-motor interaction (Figure 2). The interval between the stimuli was fixed at 10 s, a sufficient period to reset the desynchronization of the alpha rhythms (Babiloni et al., 2008). A fixed interval also allowed to produce a sort of predictability of the upcoming auditory and electrical stimuli, optimal to study the anticipatory alpha ERD/ERS responses. However, subjects were not informed of this fixed interval to avoid any counting strategies.<br>EEG data are uploaded in .hdf5 extension (g.recorder amplifier) to be analyzed with EEGLAB toolbox for MATLAB.Raw data coding slightly differs from the one presented in the original manuscript:no-M+P = UM-no-M+P-bil = BM-yes-M+P = UM+
DOI: 10.48756/ined-ie0273b-1424
title: Toi et l'environnement : quelles habitudes ?
title: Enquête des apprentis chercheurs
DOI: 10.13012/b2idb-7239548_v1
title: Data from: Investigating the linear dependence of direct and indirect radiative forcing on emission of carbonaceous aerosols in a global climate model

description: The dataset contains processed model fields used to generate data, figures and tables in the Journal of Geophysical Research article "Investigating the linear dependence of direct and indirect radiative forcing on emission of carbonaceous aerosols in a global climate model." The processed data are monthly averaged cloud properties (CCN, CDNC and LWP) and forcing variables (DRF and IRF) at original CAM5 spatial resolution (1.9° by 2.5°). Raw model output fields from CAM5 simulations are available through NERSC upon request. Please find more detailed information in the ReadMe file.
DOI: 10.5281/zenodo.10392425
title: Data for "An autonomous quantum machine to measure the thermodynamic arrow of time"

description: Numerical simulation data from the article "An autonomous quantum machine to measure the thermodynamic arrow of time"

J. Monsel, C. Elouard, A. Auffèves npj Quantum Inf 4, 59 (2018). https://doi.org/10.1038/s41534-018-0109-8

See the jupyter notebook for the data analysis and figures.

The code to perform the numerical simulations is given in the repository https://gitlab.com/juliette.monsel/jarzynski-equality-in-optomechanical-system.
DOI: 10.5281/zenodo.10392426
title: Data for "An autonomous quantum machine to measure the thermodynamic arrow of time"

description: Numerical simulation data from the article "An autonomous quantum machine to measure the thermodynamic arrow of time"

J. Monsel, C. Elouard, A. Auffèves npj Quantum Inf 4, 59 (2018). https://doi.org/10.1038/s41534-018-0109-8

See the jupyter notebook for the data analysis and figures.

The code to perform the numerical simulations is given in the repository https://gitlab.com/juliette.monsel/jarzynski-equality-in-optomechanical-system.
DOI: 10.5281/zenodo.10401847
title: List of references used in the bibliometric analysis of Chapter 2 - History of Research About the Tropical Brazilian Coral Reef Systems - Book: Brazilian Coral Reefs

description: This list contains 755 references related to coral reefs research. This list was obtained through a search for articles and book chapters in the databases Web of Science and Scopus, using the terms "reef" and "Brazil" in Title, Abstract and Keywords, added to references included from the authors own databases. The search was made in February, 12th 2021.
DOI: 10.5281/zenodo.10401848
title: List of references used in the bibliometric analysis of Chapter 2 - History of Research About the Tropical Brazilian Coral Reef Systems - Book: Brazilian Coral Reefs

description: This list contains 755 references related to coral reefs research. This list was obtained through a search for articles and book chapters in the databases Web of Science and Scopus, using the terms "reef" and "Brazil" in Title, Abstract and Keywords, added to references included from the authors own databases. The search was made in February, 12th 2021.
DOI: 10.5281/zenodo.10307337
title: Benchmark results for JavaSMT code-generator and parser-interpreter for SMT-LIB2

description: The new integration of a code-generator and parser-interpreter for SMT-LIB2 into JavaSMT [1] was benchmark tested with CPAchecker [2], the Benchexec framework [3] using the included run definition 'princess_run.xml' and SV-Benchmarks [4]. The results are available in 'results.2023-11-28_17-09-38.table.csv' and 'results.2023-11-28_17-09-38.table.csv'. The log files for each individual task can be found in results.zip. 

[1] github.com/sosy-lab/java-smt/pull/343

[2] svn.sosy-lab.org/software/cpachecker/branches/javasmt-smtlib2-generator-parser/

[3] github.com/sosy-lab/benchexec/releases/tag/3.20

[4] gitlab.com/sosy-lab/benchmarking/sv-benchmarks, commit 509aa682
DOI: 10.5281/zenodo.10307339
title: Benchmark results for JavaSMT code-generator and parser-interpreter for SMT-LIB2

description: The new integration of a code-generator and parser-interpreter for SMT-LIB2 into JavaSMT [1] was benchmark tested with CPAchecker [2], the Benchexec framework [3] using the included run definition 'princess_run.xml' and SV-Benchmarks [4]. The results are available in 'results.2023-11-28_17-09-38.table.csv' and 'results.2023-11-28_17-09-38.table.csv'. The log files for each individual task can be found in results.zip. 

[1] github.com/sosy-lab/java-smt/pull/343

[2] svn.sosy-lab.org/software/cpachecker/branches/javasmt-smtlib2-generator-parser/

[3] github.com/sosy-lab/benchexec/releases/tag/3.20

[4] gitlab.com/sosy-lab/benchmarking/sv-benchmarks, commit 509aa682
DOI: 10.6084/m9.figshare.24852318
title: Repeatability of Biometric measurements PlosONE PONE-D23-26191

description: This minimal dataset contains data of triple measurement of patient eyes prior to cataract surgery using the IOLMaster 700 optical biometer.
DOI: 10.6084/m9.figshare.24852318.v1
title: Repeatability of Biometric measurements PlosONE PONE-D23-26191

description: This minimal dataset contains data of triple measurement of patient eyes prior to cataract surgery using the IOLMaster 700 optical biometer.
DOI: 10.25505/fiz.icsd.cc23glpw
title: CSD 1950448: Experimental Crystal Structure Determination

description: Related Article: Natalija van Well, Michael Bolte, Claudio Eisele, Lukas Keller, Jürg Schefer, Sander van Smaalen|2020|J.Phys.Chem.Solids|140|109386|doi:10.1016/j.jpcs.2020.109386
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc28h7rs
title: CSD 2100025: Experimental Crystal Structure Determination

description: Related Article: Na Li, Gele Teri, Muge Shele, Sagala, Namila, Menghe Baiyin|2023|J.Cluster Sci.|34|1853|doi:10.1007/s10876-022-02355-x
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc23glnv
title: CSD 1950447: Experimental Crystal Structure Determination

description: Related Article: Natalija van Well, Michael Bolte, Claudio Eisele, Lukas Keller, Jürg Schefer, Sander van Smaalen|2020|J.Phys.Chem.Solids|140|109386|doi:10.1016/j.jpcs.2020.109386
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.