cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4405437
title: Galactic maps of H2, reconstructed from the CfA CO survey

description: Maps of galactic H<sub>2</sub>, reconstructed from the CfA CO survey (Dame et al., ApJ 547 (2001) 792) data, downloaded from the SAO Radio Telescope Data Center, using a Bayesian variational inference approach. Here, we provide the mean and standard deviation of the gas density (in cm<sup>-3</sup>) on a three-dimensional 512x512x16 grid, spanning -16 kpc &lt; x &lt; 16 kpc, 16 kpc &lt; y &lt; 16 kpc and -0.5 kpc &lt; z &lt; 0.5 kpc, both for the BEG03 and the SBM15 gas flow models: H2_dens_mean_BEG03.fits H2_dens_stddev_BEG03.fits H2_dens_mean_SBM15.fits H2_dens_stddev_SBM15.fits In addition, we also publish the mean and standard deviation of the mass surface density (in M<sub>sun</sub> pc<sup>-2</sup>) on a two-dimensional 512x512 grid, spanning -16 kpc &lt; x &lt; 16 kpc and 16 kpc &lt; y &lt; 16 kpc, again for both gas flow models: H2_surf_mass_dens_mean_BEG03.fits H2_surf_mass_dens_stddev_BEG03.fits H2_surf_mass_dens_mean_SBM15.fits H2_surf_mass_dens_stddev_SBM15.fits Throughout, we have assumed an CO-to-H<sub>2</sub> conversion factor X<sub>CO</sub>=2 10<sup>20</sup> molecules cm<sup>-2</sup> (K km s<sup>-1</sup>)<sup>-1</sup>. Refer to the FITS headers for more detailed information and see arXiv:2012.15770 for a detailed description of the reconstruction as well as a comparison with earlier studies. When using the deprojected gas maps in your research work, please refer to this Zenodo dataset and the following publication<br> P. Mertsch and A. Vittino, "Bayesian inference of three-dimensional gas maps: I. Galactic CO", arXiv:2012.15770.
DOI: 10.6084/m9.figshare.13513533.v1
title: Dataset of phage genes in Escherichia coli K-12

description: Phages engage in an evolutionary dance with bacteria and archaea, and play a role in regulating their numbers. Given that bacteriophage could enter the lysogeny cycle during unfavourable circumstances, it comes as not a surprise that genome of bacterial species harbour phage genes. Although such genes may not remain intact due to evolutionary pressure on them or the action of transposon, they nevertheless represent a chronicle of the types of phages that have infected a bacterial species. With this perspective in mind, this work sought to categorize the different types of bacteriophages that have infected <i>Escherichia coli</i> K-12, and integrated their genome into the bacterial genome through lysogeny. Profiling the annotated genome of <i>E. coli</i> K-12 revealed the presence of 10 prophages, each with their complement of phage genes. Many of the phages are likely deactivated given the large number of phage genes that have been transposed through the action of insertion element or transposon. Hence, these defective prophages in <i>E. coli</i> K-12 represents a treasure trove of information for understanding the action of transposon on genome maintenance, and their role in guiding the evolution of the bacterial species. Each set of genes belonging to a prophage has been categorized to different bins depending on their function in DNA replication, transcription, and structural function. But, persistently, a large set of genes have to be categorized as miscellaneous, and these predominantly include phage genes whose identities have been swapped with those of structural genes in the host genome. Collectively, this dataset of phage genes in <i>Escherichia coli</i> should serve as a useful starting point for further studies seeking to understand the role of bacteriophages in shaping the evolution of this model organism. <b><i></i></b>
DOI: 10.6084/m9.figshare.13513533
title: Dataset of phage genes in Escherichia coli K-12

description: Phages engage in an evolutionary dance with bacteria and archaea, and play a role in regulating their numbers. Given that bacteriophage could enter the lysogeny cycle during unfavourable circumstances, it comes as not a surprise that genome of bacterial species harbour phage genes. Although such genes may not remain intact due to evolutionary pressure on them or the action of transposon, they nevertheless represent a chronicle of the types of phages that have infected a bacterial species. With this perspective in mind, this work sought to categorize the different types of bacteriophages that have infected <i>Escherichia coli</i> K-12, and integrated their genome into the bacterial genome through lysogeny. Profiling the annotated genome of <i>E. coli</i> K-12 revealed the presence of 10 prophages, each with their complement of phage genes. Many of the phages are likely deactivated given the large number of phage genes that have been transposed through the action of insertion element or transposon. Hence, these defective prophages in <i>E. coli</i> K-12 represents a treasure trove of information for understanding the action of transposon on genome maintenance, and their role in guiding the evolution of the bacterial species. Each set of genes belonging to a prophage has been categorized to different bins depending on their function in DNA replication, transcription, and structural function. But, persistently, a large set of genes have to be categorized as miscellaneous, and these predominantly include phage genes whose identities have been swapped with those of structural genes in the host genome. Collectively, this dataset of phage genes in <i>Escherichia coli</i> should serve as a useful starting point for further studies seeking to understand the role of bacteriophages in shaping the evolution of this model organism. <b><i></i></b>
DOI: 10.6084/m9.figshare.13513548.v1
title: A comparative study on dispersed doses during photon and proton radiation therapy in pediatric applications

description: The Monte Carlo method was employed to simulate realistic treatment situations for photon and proton radiation therapy for a set of Oak Ridge National Laboratory (ORNL) pediatric phantoms for 15, 10, 5 and 1-year olds as well as newborns. Complete radiotherapy situations were simulated using the previously developed NRUrad input code for Monte Carlo N-Particle (MCNP) code package. Each pediatric phantom was irradiated at five different positions, namely, the testes, colon, liver, left lung and brain, and the doses in targeted organs (<i>D<sub>t</sub></i>) were determined using the track length estimate of energy. The dispersed photon and proton doses in non-targeted organs (<i>D<sub>d</sub></i>), namely, the skeleton, skin, brain, spine, left and right lungs were computed. The conversion coefficients (<i>F = D<sub>d</sub>/D<sub>t</sub></i>) of the dispersed doses were used to study the dose dispersion in different non-targeted organs for phantoms for 15, 10, 5 and 1-year olds as well as newborns. In general, the <i>F</i> values were larger for younger patients. The <i>F</i> values for non-targeted organs for phantoms for 1-year olds and newborns were significantly larger compared to those for other phantoms. The dispersed doses from proton radiation therapy were also found to be significantly lower than those from conventional photon radiation therapy. For example, the largest <i>F</i> values for the brain were 65.6% and 0.206% of the dose delivered to the left lung (<i>P<sub>4</sub></i>) for newborns during photon and proton radiation therapy, respectively. The present results demonstrated that dispersion of photons and generated electrons significantly affected the absorbed doses in non-targeted organs during pediatric photon therapy, and illustrated that proton therapy could in general bring benefits for treatment of pediatric cancer patients.
DOI: 10.6084/m9.figshare.13513548
title: A comparative study on dispersed doses during photon and proton radiation therapy in pediatric applications

description: The Monte Carlo method was employed to simulate realistic treatment situations for photon and proton radiation therapy for a set of Oak Ridge National Laboratory (ORNL) pediatric phantoms for 15, 10, 5 and 1-year olds as well as newborns. Complete radiotherapy situations were simulated using the previously developed NRUrad input code for Monte Carlo N-Particle (MCNP) code package. Each pediatric phantom was irradiated at five different positions, namely, the testes, colon, liver, left lung and brain, and the doses in targeted organs (<i>D<sub>t</sub></i>) were determined using the track length estimate of energy. The dispersed photon and proton doses in non-targeted organs (<i>D<sub>d</sub></i>), namely, the skeleton, skin, brain, spine, left and right lungs were computed. The conversion coefficients (<i>F = D<sub>d</sub>/D<sub>t</sub></i>) of the dispersed doses were used to study the dose dispersion in different non-targeted organs for phantoms for 15, 10, 5 and 1-year olds as well as newborns. In general, the <i>F</i> values were larger for younger patients. The <i>F</i> values for non-targeted organs for phantoms for 1-year olds and newborns were significantly larger compared to those for other phantoms. The dispersed doses from proton radiation therapy were also found to be significantly lower than those from conventional photon radiation therapy. For example, the largest <i>F</i> values for the brain were 65.6% and 0.206% of the dose delivered to the left lung (<i>P<sub>4</sub></i>) for newborns during photon and proton radiation therapy, respectively. The present results demonstrated that dispersion of photons and generated electrons significantly affected the absorbed doses in non-targeted organs during pediatric photon therapy, and illustrated that proton therapy could in general bring benefits for treatment of pediatric cancer patients.
DOI: 10.6084/m9.figshare.13513548.v2
title: A comparative study on dispersed doses during photon and proton radiation therapy in pediatric applications

description: The Monte Carlo method was employed to simulate realistic treatment situations for photon and proton radiation therapy for a set of Oak Ridge National Laboratory (ORNL) pediatric phantoms for 15, 10, 5 and 1-year olds as well as newborns. Complete radiotherapy situations were simulated using the previously developed NRUrad input code for Monte Carlo N-Particle (MCNP) code package. Each pediatric phantom was irradiated at five different positions, namely, the testes, colon, liver, left lung and brain, and the doses in targeted organs (<i>D<sub>t</sub></i>) were determined using the track length estimate of energy. The dispersed photon and proton doses in non-targeted organs (<i>D<sub>d</sub></i>), namely, the skeleton, skin, brain, spine, left and right lungs were computed. The conversion coefficients (<i>F = D<sub>d</sub>/D<sub>t</sub></i>) of the dispersed doses were used to study the dose dispersion in different non-targeted organs for phantoms for 15, 10, 5 and 1-year olds as well as newborns. In general, the <i>F</i> values were larger for younger patients. The <i>F</i> values for non-targeted organs for phantoms for 1-year olds and newborns were significantly larger compared to those for other phantoms. The dispersed doses from proton radiation therapy were also found to be significantly lower than those from conventional photon radiation therapy. For example, the largest <i>F</i> values for the brain were 65.6% and 0.206% of the dose delivered to the left lung (<i>P<sub>4</sub></i>) for newborns during photon and proton radiation therapy, respectively. The present results demonstrated that dispersion of photons and generated electrons significantly affected the absorbed doses in non-targeted organs during pediatric photon therapy, and illustrated that proton therapy could in general bring benefits for treatment of pediatric cancer patients.
DOI: 10.5281/zenodo.4408577
title: Data and code used in "Distinct Lithologies in Jezero Crater, Mars"

description: This repository contains the datasets and code used in the Zastrow and Glotch manuscript entitled "Distinct Lithologies in Jezero Crater, Mars". <strong>Abstract</strong> Jezero crater is the landing site for the Mars 2020 Perseverance rover. The Noachian-aged crater has undergone several periods of fluvial and lacustrine activity and many phyllosilicate- and carbonate-bearing rocks formed as a result. It also contains a large portion of the regional Nili Fossae olivine-carbonate unit. In this work, we performed spectral mixture analysis of visible/near-infrared hyperspectral imagery over Jezero. We modeled carbonate abundances up to ~35% and identified three distinct units containing different carbonate phases. Our work also suggests that the olivine in the regional unit is largely restricted to aeolian deposis overlying the carbonate-bearing rocks. The diversity of carbonate phases in Jezero points to multiple periods of carbonate formation under varying conditions. <strong>Description of Repository Datasets</strong> code_unmixing.zip: This folder contains the necessary files to unmix CRISM data using davinci's sma() function. The model is run by launching davinci and entering <em>source('ssa_unmixing_040ff')</em>. To switch the CRISM image, edit line 10 in s<em>sa_unmixing_040ff</em>. Unmixing code: <em>ssa_unmixing_040ff</em> Davinci functions: <em>unmixing_fxns.dvrc</em> Spectral library: <em>n_k_jezeropaper.hdf</em> data_input.zip: This folder contains ENVI image files that have been DISORT-processed and are ready to be modeled using the unmixing code. Each of the 3 CRISM images has two data files and ENVI headers: 1) the full uncut image cube and 2) the cut image cube. data_models.zip: This folder contains NetCDF files with the output of the unmixing model that have been registered to the HiRISE base image. Files contain the input CRISM measured spectra, output modeled spectra, normalized mineral concentration maps, and RMS error maps. Data were written to file using the xarray Python package and can be read into python using the <em>xarray.open_dataset()</em> function. No Siderite, Added Kaolinite, Full Spectrum These folders contain unregistered (but projected) model output for these three additional models. data_roi.zip: This folder contains the shapefile for the ROI mapping.
DOI: 10.13139/olcf/1674982
title: Molecular simulation data for "Data-guided Multi-Map variables for ensemble refinement of molecular movies"

description: These trajectories, scripts, and analysis performed on Summit underly the work published as "Data-guided Multi-Map variables for ensemble refinement of molecular movies". The trajectories include equilibrium and non-equilibrium sampling of ADK, CODH, and FLPP3, the scripts used to build the systems, and the scripts used to analyze the output. The directory structure is explained further in an internal README file.
DOI: 10.18141/1755151
title: InSAR Monitoring to Evaluate Surface Changes with CO2 Storage in a Depleted Oil Field in Northern Michigan

description: Battelle evaluated the potential use of Interferometric Synthetic Aperture Radar (InSAR) for monitoring the outcome of injected CO2 at the Dover 33 reef near Gaylord, Michigan.
DOI: 10.25919/fvyz-e194
title: Parkes observations for project P1061 semester 2020OCTS_07

description: Fast Radio Bursts (FRBs) have extremely high brightness temperature, owing to their short-duration and prominent flux from the distant universe. The studies on emission mechanism of FRBs have met bottleneck for a long time unless a complete spectrum is measured. We propose to observe a new repeating FRB source, FRB 180301, using the Parkes ultra-wide-bandwidth receiver (UWL). This source was initially found by Parkes multibeam receivers and confirmed repetition by the FAST telescope. The source is still active until Jun 2020 from FAST follow-ups. It’s an ideal opportunity to capture comprehensive spectral information using the Parkes UWL. We demonstrate that the beam coverage is feasible and 30-hr observations are required for at least one detection.
DOI: 10.6084/m9.figshare.13331720
title: Additional file 1 of Treatment strategy for atypical ulnar fracture due to severely suppressed bone turnover caused by long-term bisphosphonate therapy: a case report and literature review

description: Additional file 1. Summary of treatment strategies for atypical ulnar fracture and outcomes in previous reports. This table summarizes the treatment strategies and outcomes of atypical ulnar fracture in 25 cases described in 18 previous reports and the present case.
DOI: 10.6084/m9.figshare.13331720.v1
title: Additional file 1 of Treatment strategy for atypical ulnar fracture due to severely suppressed bone turnover caused by long-term bisphosphonate therapy: a case report and literature review

description: Additional file 1. Summary of treatment strategies for atypical ulnar fracture and outcomes in previous reports. This table summarizes the treatment strategies and outcomes of atypical ulnar fracture in 25 cases described in 18 previous reports and the present case.
DOI: 10.21227/d0ea-0c52
title: Coronavirus (COVID-19) Geo-tagged Tweets Dataset

description: This dataset contains IDs and sentiment scores of the geo-tagged tweets related to the COVID-19 pandemic. The tweets are captured by an on-going project deployed at https://live.rlamsal.com.np. The model monitors the real-time Twitter feed for coronavirus-related tweets using 90+ different keywords and hashtags that are commonly used while referencing the pandemic. Complying with Twitter's content redistribution policy, only the tweet IDs are shared. You can re-construct the dataset by hydrating these IDs. The tweet IDs in this dataset belong to the tweets tweeted providing an exact location.The paper associated with this dataset is available here: Design and analysis of a large-scale COVID-19 tweets dataset-------------------------------------Related datasets: (a) Coronavirus (COVID-19) Tweets Sentiment Trend (Global)(b) Tweets Originating from India During COVID-19 Lockdowns-------------------------------------Below is the quick overview of this dataset.— Dataset name: GeoCOV19Tweets Dataset— Number of tweets : 290,628 tweets— Coverage : Global— Language : English (EN)— Dataset usage terms : By using this dataset, you agree to (i) use the content of this dataset and the data generated from the content of this dataset for non-commercial research only, (ii) remain in compliance with Twitter's Developer Policy and (iii) cite the following paper:Lamsal, R. Design and analysis of a large-scale COVID-19 tweets dataset. Applied Intelligence (2020). https://doi.org/10.1007/s10489-020-02029-z— Primary dataset : Coronavirus (COVID-19) Tweets Dataset (COV19Tweets Dataset)— Dataset updates : Everyday— Active keywords and hashtags: keywords.tsvPlease visit this page (primary dataset) for details regarding the collection date and time (and other notes) of each CSV file present in this dataset.
DOI: 10.6084/m9.figshare.13513620
title: gallstone data

description: Relationship between liver resection for hepatocellular carcinoma and the prevalence of gallstones: A cohort study<b></b>
DOI: 10.5281/zenodo.4408594
title: MoMA Collection - Automatic Monthly Update

description: Temporary Description
DOI: 10.5281/zenodo.4408593
title: MoMA Collection - Automatic Monthly Update

description: Temporary Description
DOI: 10.34740/kaggle/dsv/1801927
title: COVID-19 Indonesia Dataset
DOI: 10.25919/ebas-gs04
title: Visualization of the hydrogen atom wave functions

description: DCM plugin for generating hydrogen atom wave functions and electron probability densities for interactive visualization using a web browser.
DOI: 10.34740/kaggle/dsv/1802025
title: COVID19 cases by Continent
DOI: 10.18419/darus-3982/1
title: Figure3.xlsx

description: :unav
DOI: 10.18419/darus-3982/2
title: Figure4.xlsx

description: :unav
DOI: 10.18419/darus-3982/3
title: Figure2.xlsx

description: :unav
DOI: 10.18419/darus-3982/4
title: Figure1.xlsx

description: :unav
DOI: 10.18419/darus-3982/5
title: SuppFigure3.xlsx

description: :unav
DOI: 10.18419/darus-3982/6
title: SuppFigure10.xlsx

description: :unav
DOI: 10.18419/darus-3982/7
title: SuppFigure7.xlsx

description: :unav
DOI: 10.18419/darus-3982/8
title: SuppFigure6.xlsx

description: :unav
DOI: 10.15468/dl.ncumzw
title: Occurrence Download

description: A dataset containing 178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-152.30896 -34.94113,17.30896 -34.94113,17.30896 32.94113,-152.30896 32.94113,-152.30896 -34.94113))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Adelpha mesentina Cramer, 1779"
 ]
}

 The dataset includes 178 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083662-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3982/9
title: SuppFigure5.xlsx

description: :unav
DOI: 10.18419/darus-3982/10
title: SuppFigure11.xlsx

description: :unav
DOI: 10.15468/dl.4p7aet
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psychotria palawanensis Elmer"
 ]
}

 The dataset includes 16 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083658-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3982/11
title: SuppFigure8.xlsx

description: :unav
DOI: 10.18419/darus-3982/12
title: SuppFigure9.xlsx

description: :unav
DOI: 10.18419/darus-3982/13
title: SuppFigure2.xlsx

description: :unav
DOI: 10.15468/dl.apx3be
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xylophallus xylogenus (Mont.) E.Fisch."
 ]
}

 The dataset includes 20 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083665-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3982/14
title: SuppFigure4.xlsx

description: :unav
DOI: 10.18419/darus-3982/15
title: SuppFigure4Bottomright.tab

description: :unav
DOI: 10.17632/r744kw3sr3.1
title: Data for "Education by the Escola Nacional Florestan Fernandes as Transmodernization from Capitalist Consumerism" published by RAC-Revista de Administração Contemporânea

description: In order to discuss ENFF's educational project, highlighting its transmodernist consumerist educational principles, we surveyed the courses normally offered by the school and which are available on the school's website and other platforms, such as YouTube, for example. The themes of the courses are varied, and the courses always have a wide range of support material, such as videos and texts. However, despite various themes ranging from Ideology and Marx's Method regarding land regularization, environmental destruction, and diversity, the courses have one thing in common: they aim to empower individuals in their social relationships.

The large volume of courses (about 30) and their vast content imposed on us the need to select one to focus on. Therefore, we chose to analyze the content of the course called “Agrarian Question: Cooperation and Agroecology.” Table 1 offers an overview of the topics discussed in each class and the number of transcribed pages of the classes’ lectures that made up our research corpus.

Table 1 - ENFF’s “Agrarian Question: Cooperation and Agroecology” course description
Topics of the Classes - # of transcribed pages
Popular Project for Brazil and Agroecology and Agrarian Reform - 24
Fundamental Laws of Capitalism in Agriculture - 58
Nature of the Development of Capitalism in Agriculture - 102
Popular Agrarian Reform - 47
Agroecology - 18
Agroecology and Internationalism - 27
Organization of Production Chains - 36
Total of Transcribed Pages - 312
DOI: 10.18419/darus-3982/16
title: SuppFigure6Bottomleft.tab

description: :unav
DOI: 10.18419/darus-3982/17
title: Figure4aTopleft.tab

description: :unav
DOI: 10.18419/darus-3982/18
title: Figure4aTopright.tab

description: :unav