cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.n8b2bg
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Samolus valerandi L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -28.5786,20.509 -28.5786,20.509 -32.9007,25.5395 -32.9007,25.5395 -28.5786))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047658-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15668927
title: 521_corsican_interior_robinson_crusoe.docx
DOI: 10.5281/zenodo.15668928
title: 521_corsican_interior_robinson_crusoe.docx
DOI: 10.15468/dl.et2dqc
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is La tortuga verde en las islas Canarias / Green turtles in the Canary Islands (aggregated per 1-degree cell)"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047659-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wczjh2
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Samolus valerandi L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.7576 -24.3688,20.529 -24.0715,20.509 -24.0715,20.509 -28.5786,25.5395 -28.5786,25.5395 -24.0715,25.1306 -24.0715,24.9333 -24.4571,23.8962 -24.2467,22.8065 -24.295,22.3719 -24.7207,22.2323 -25.547,22.0387 -25.7188,21.7833 -25.7784,21.5388 -25.7113,21.3553 -25.5415,20.7576 -24.3688))"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047660-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wvdb8c
title: Occurrence Download

description: A dataset containing 510 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Meconopsis horridula Hook.fil. & Thomson"
 ]
}

 The dataset includes 510 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047661-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15668943
title: 521_crimean_tatar_interior_robinson_crusoe.docx
DOI: 10.5281/zenodo.15668944
title: 521_crimean_tatar_interior_robinson_crusoe.docx
DOI: 10.15468/dl.m3ga7r
title: Occurrence Download

description: A dataset containing 2298 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thunnus maccoyii (Castelnau, 1872)"
 ]
}

 The dataset includes 2298 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047662-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bpctud
title: Occurrence Download

description: A dataset containing 4322 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xylocarpus J.Koenig"
 ]
}

 The dataset includes 4322 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005376-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rafycm
title: Occurrence Download

description: A dataset containing 33967 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Caragana Lam.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 33967 records from 405 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005377-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bm43j9
title: Occurrence Download

description: A dataset containing 689 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pavonia paludicola Nicolson ex Fryxell"
 ]
}

 The dataset includes 689 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005380-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13762080
title: Research Compendium for: "Quina technology from Southwest China indicates diverse late-Pleistocene human dynamics in East Asia"

description: ✉ Correspondence: Hao Li lihao@itpcas.ac.cn

✉ Correspondence: Peiyuan Xiao xiaopeiyuan@itpcas.ac.cn

✉ Correspondence: Bo Li bli@uow.edu.au

✉ Correspondence: Davide Delpiano dlpdvd@unife.it




Online access:

Zenodo DOI: https://doi.org/10.5281/zenodo.13762081

The files at the URL above will generate the results as found in the publication. The files hosted at https://github.com/PeiyuanXiao/Lithic-data-Longtan-site are the development versions and may have changed since the paper was published.

Maintainer of this repository:

Peiyuan Xiao xiaopeiyuan@itpcas.ac.cn

Ben Marwick bmarwick@uw.edu


Abstract:

The Late Pleistocene of Eurasia is key for understanding interactions between early modern humans and different types of archaic human groups. During this period, lithic technology shows more diversity and complexity, likely indicating flexible adaptative strategies. However, cultural variability as expressed by technological types remains vague in large parts of eastern Eurasia, like in China. Here we report a complete Quina technological system identified from the study of the Longtan site in Southwest China. This site has been securely dated to ca. 60–50 thousand years ago (ka), with compelling evidence of core exploitation, production of large and thick flakes, shaping and maintenance of scrapers exhibiting the whole Quina concept, typical of contemporary European Middle Paleolithic technologies developed by Neanderthal groups adapted to climatic oscillations during Marine Isotope Stage (MIS) 4 and early MIS 3. The finding of a Quina lithic assemblage in China not only demonstrates the existence of a Middle Paleolithic technology in the region, but also shows large-scale analogies with Neanderthal behaviors in western Europe. Longtan substantially extends the geographic distribution of this technical behavior in East Asia. Although its origin remains unclear, implications for Pleistocene hominin dispersal and adaptation to diverse ecological settings are considered. The Longtan lithic evidence also provides perspectives for understanding the cultural evolutionary situation before the large-scale arrivals of early modern humans in East Asia predating ~45 ka.

Keywords:

Middle Paleolithic; fluvial terrace; early MIS 3; Late Pleistocene; hominins





R packages and their versions:

Data processing & analyzing: readxl (>= 1.4.3),tidyverse (>= 2.0.0),forcats (>= 1.0.0),dunn.test (>= 1.3.6), other statistical testing methods use the corresponding functions in the R base package

Plots creating: tidyverse (>= 2.0.0),ggpmisc (>= 0.5.6),ggdist (>= 3.3.2),MetBrewer (>= 0.2.0),ggbeeswarm (>= 0.7.2),cowplot (>= 1.1.3),patchwork (>= 1.2.0),ggtext (>= 0.1.2),scales (>= 1.3.0)
DOI: 10.5281/zenodo.13762081
title: Research Compendium for: "Quina technology from Southwest China indicates diverse late-Pleistocene human dynamics in East Asia"

description: ✉ Correspondence: Hao Li lihao@itpcas.ac.cn

✉ Correspondence: Peiyuan Xiao xiaopeiyuan@itpcas.ac.cn

✉ Correspondence: Bo Li bli@uow.edu.au

✉ Correspondence: Davide Delpiano dlpdvd@unife.it




Online access:

Zenodo DOI: https://doi.org/10.5281/zenodo.13762081

The files at the URL above will generate the results as found in the publication. The files hosted at https://github.com/PeiyuanXiao/Lithic-data-Longtan-site are the development versions and may have changed since the paper was published.

Maintainer of this repository:

Peiyuan Xiao xiaopeiyuan@itpcas.ac.cn

Ben Marwick bmarwick@uw.edu


Abstract:

The Late Pleistocene of Eurasia is key for understanding interactions between early modern humans and different types of archaic human groups. During this period, lithic technology shows more diversity and complexity, likely indicating flexible adaptative strategies. However, cultural variability as expressed by technological types remains vague in large parts of eastern Eurasia, like in China. Here we report a complete Quina technological system identified from the study of the Longtan site in Southwest China. This site has been securely dated to ca. 60–50 thousand years ago (ka), with compelling evidence of core exploitation, production of large and thick flakes, shaping and maintenance of scrapers exhibiting the whole Quina concept, typical of contemporary European Middle Paleolithic technologies developed by Neanderthal groups adapted to climatic oscillations during Marine Isotope Stage (MIS) 4 and early MIS 3. The finding of a Quina lithic assemblage in China not only demonstrates the existence of a Middle Paleolithic technology in the region, but also shows large-scale analogies with Neanderthal behaviors in western Europe. Longtan substantially extends the geographic distribution of this technical behavior in East Asia. Although its origin remains unclear, implications for Pleistocene hominin dispersal and adaptation to diverse ecological settings are considered. The Longtan lithic evidence also provides perspectives for understanding the cultural evolutionary situation before the large-scale arrivals of early modern humans in East Asia predating ~45 ka.

Keywords:

Middle Paleolithic; fluvial terrace; early MIS 3; Late Pleistocene; hominins





R packages and their versions:

Data processing & analyzing: readxl (>= 1.4.3),tidyverse (>= 2.0.0),forcats (>= 1.0.0),dunn.test (>= 1.3.6), other statistical testing methods use the corresponding functions in the R base package

Plots creating: tidyverse (>= 2.0.0),ggpmisc (>= 0.5.6),ggdist (>= 3.3.2),MetBrewer (>= 0.2.0),ggbeeswarm (>= 0.7.2),cowplot (>= 1.1.3),patchwork (>= 1.2.0),ggtext (>= 0.1.2),scales (>= 1.3.0)
DOI: 10.15468/dl.c7cnwz
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Ciconia boyciana Swinhoe, 1873",
 "Year 2024-2025"
 ]
}

 The dataset includes 122 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005381-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w5uvzu
title: Occurrence Download

description: A dataset containing 142317 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Gallinula chloropus (Linnaeus, 1758))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 142317 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005369-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.agwxrt
title: Occurrence Download

description: A dataset containing 27035 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Cisticola aridulus Witherby, 1900)",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 27035 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005383-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e5ftqc
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Ciconia boyciana Swinhoe, 1873",
 "Year 2024-2025"
 ]
}

 The dataset includes 122 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005384-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tbszfu
title: Occurrence Download

description: A dataset containing 2807 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mexico, United States of America, Belize, Honduras, Guatemala, El Salvador, Panama, Nicaragua)",
 "OccurrenceStatus is Present",
 "TaxonKey is Polypodium scouleri Hook. & Grev."
 ]
}

 The dataset includes 2807 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005385-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28244384
title: The phylogenetic trees of 19 HGT-acquired genes（<b>Spodoptera frugiperda</b>）

description: The phylogenetic trees of 19 HGT-acquired genes
DOI: 10.5281/zenodo.14708822
title: Data for Basic Data Processing of the InSight Seismic Data of Mars for Further Seismological Researches"

description: ## Data Processing for InSight SEIS VBB continous data

Step1. Remove tick noise (Compaire et al., 2021)Step2. Detect and remove glitches (Xu et al., 2022)Step3. Cut and align tracesStep4. Remove instrument responseStep5. Rorate from UVW to NEZ

References:[1]. Compaire, N.; Margerin, L.; Garcia, R.F.; et al. 2021. Autocorrelation of the Ground Vibrations Recorded by the SEIS‐InSight Seismometer on Mars. Journal of Geophysical Research: Planets, 126.[2]. Xu, W., Zhu, Q., & Zhao, L. (2022). GlitchNet: A Glitch Detection and Removal System for SEIS Records Based on Deep Learning. Seismological Research Letters, 93(5), 2804–2817.[3]. Beyreuther, M., Barsch, R., Krischer, L., Megies, T., Behr, Y., & Wassermann, J. (2010). ObsPy: A Python toolbox for seismology. Seismological Research Letters, 81(3), 530-533.

Data Structures:

./RawDownload_LMST/  ./RawDownload_LMST/LMST_0001.mseed  ...  ./RawDownload_LMST/LMST_1440.mseed./Data_Step1_TickRemoval/./Data_Step2_GlitchRemoval/./Data_Step3_CutAlign/./Data_Step4_ResponseRemoval/./Data_Step5_Rotate/./Utilities/  ./Utilities/GlitchNet  ./Utilities/tk_noise  ./Utilities/ELYSE.dataless

#0. We first download waveform data for each sol from 'ws.ipgp.fr' or 'service.iris.edu'.    URL = http://ws.ipgp.fr/fdsnws/dataselect/1/querynet=XB&sta=ELYSE&loc=02&cha=BH?    For data pertaining to each sol (e.g., sol 235), the start time is one hour before the sol (i.e., sol 234, 23:00 LMST), and the end time is one hour after the sol (i.e., sol 236, 01:00 LMST).

#1. Tick noise is an electrical disturbance (cross-talk) from the acquisition of the temperature inside SEIS.    We follow Compaire et al. (2021) to firstly obtain the tick noises on the U, V, W components respectively by stacking continuous records.    Since the pattern and the amplitude of the tick noise remains the same during the entire mission, we remove the stacked tick noise from the marsquake records by subtraction. 

#2. We further detect and remove the glitches using GlitchNet (Xu et al., 2022). 

#3. Due to gaps in the U, V, and W components, we cut and align these traces to ensure that the start and end times are the same across the U, V, and W components for each trace.

#4. We remove the instrument response (with a pre-filtering from 0.01 to 9.0 Hz) to obtain ground velocity records.

#5. We rotate the coordinate system from the original UVW to NEZ (North-East-Z) orientation using ObsPy (Beyreuther et al., 2010).
DOI: 10.5281/zenodo.14708823
title: Data for Basic Data Processing of the InSight Seismic Data of Mars for Further Seismological Researches"

description: ## Data Processing for InSight SEIS VBB continous data

Step1. Remove tick noise (Compaire et al., 2021)Step2. Detect and remove glitches (Xu et al., 2022)Step3. Cut and align tracesStep4. Remove instrument responseStep5. Rorate from UVW to NEZ

References:[1]. Compaire, N.; Margerin, L.; Garcia, R.F.; et al. 2021. Autocorrelation of the Ground Vibrations Recorded by the SEIS‐InSight Seismometer on Mars. Journal of Geophysical Research: Planets, 126.[2]. Xu, W., Zhu, Q., & Zhao, L. (2022). GlitchNet: A Glitch Detection and Removal System for SEIS Records Based on Deep Learning. Seismological Research Letters, 93(5), 2804–2817.[3]. Beyreuther, M., Barsch, R., Krischer, L., Megies, T., Behr, Y., & Wassermann, J. (2010). ObsPy: A Python toolbox for seismology. Seismological Research Letters, 81(3), 530-533.

Data Structures:

./RawDownload_LMST/  ./RawDownload_LMST/LMST_0001.mseed  ...  ./RawDownload_LMST/LMST_1440.mseed./Data_Step1_TickRemoval/./Data_Step2_GlitchRemoval/./Data_Step3_CutAlign/./Data_Step4_ResponseRemoval/./Data_Step5_Rotate/./Utilities/  ./Utilities/GlitchNet  ./Utilities/tk_noise  ./Utilities/ELYSE.dataless

#0. We first download waveform data for each sol from 'ws.ipgp.fr' or 'service.iris.edu'.    URL = http://ws.ipgp.fr/fdsnws/dataselect/1/querynet=XB&sta=ELYSE&loc=02&cha=BH?    For data pertaining to each sol (e.g., sol 235), the start time is one hour before the sol (i.e., sol 234, 23:00 LMST), and the end time is one hour after the sol (i.e., sol 236, 01:00 LMST).

#1. Tick noise is an electrical disturbance (cross-talk) from the acquisition of the temperature inside SEIS.    We follow Compaire et al. (2021) to firstly obtain the tick noises on the U, V, W components respectively by stacking continuous records.    Since the pattern and the amplitude of the tick noise remains the same during the entire mission, we remove the stacked tick noise from the marsquake records by subtraction. 

#2. We further detect and remove the glitches using GlitchNet (Xu et al., 2022). 

#3. Due to gaps in the U, V, and W components, we cut and align these traces to ensure that the start and end times are the same across the U, V, and W components for each trace.

#4. We remove the instrument response (with a pre-filtering from 0.01 to 9.0 Hz) to obtain ground velocity records.

#5. We rotate the coordinate system from the original UVW to NEZ (North-East-Z) orientation using ObsPy (Beyreuther et al., 2010). 

 

Jiaqi LiJLI@pku.edu.cn (lijiaqi315@gmail.com)
DOI: 10.5281/zenodo.14709002
title: Data for Basic Data Processing of the InSight Seismic Data of Mars for Further Seismological Researches"

description: ## Data Processing for InSight SEIS VBB continous data

Step1. Remove tick noise (Compaire et al., 2021)Step2. Detect and remove glitches (Xu et al., 2022)Step3. Cut and align tracesStep4. Remove instrument responseStep5. Rorate from UVW to NEZ

References:[1]. Compaire, N.; Margerin, L.; Garcia, R.F.; et al. 2021. Autocorrelation of the Ground Vibrations Recorded by the SEIS‐InSight Seismometer on Mars. Journal of Geophysical Research: Planets, 126.[2]. Xu, W., Zhu, Q., & Zhao, L. (2022). GlitchNet: A Glitch Detection and Removal System for SEIS Records Based on Deep Learning. Seismological Research Letters, 93(5), 2804–2817.[3]. Beyreuther, M., Barsch, R., Krischer, L., Megies, T., Behr, Y., & Wassermann, J. (2010). ObsPy: A Python toolbox for seismology. Seismological Research Letters, 81(3), 530-533.

Data Structures:

./RawDownload_LMST/  ./RawDownload_LMST/LMST_0001.mseed  ...  ./RawDownload_LMST/LMST_1440.mseed./Data_Step1_TickRemoval/./Data_Step2_GlitchRemoval/./Data_Step3_CutAlign/./Data_Step4_ResponseRemoval/./Data_Step5_Rotate/./Utilities/  ./Utilities/GlitchNet  ./Utilities/tk_noise  ./Utilities/ELYSE.dataless

#0. We first download waveform data for each sol from 'ws.ipgp.fr' or 'service.iris.edu'.    URL = http://ws.ipgp.fr/fdsnws/dataselect/1/querynet=XB&sta=ELYSE&loc=02&cha=BH?    For data pertaining to each sol (e.g., sol 235), the start time is one hour before the sol (i.e., sol 234, 23:00 LMST), and the end time is one hour after the sol (i.e., sol 236, 01:00 LMST).

#1. Tick noise is an electrical disturbance (cross-talk) from the acquisition of the temperature inside SEIS.    We follow Compaire et al. (2021) to firstly obtain the tick noises on the U, V, W components respectively by stacking continuous records.    Since the pattern and the amplitude of the tick noise remains the same during the entire mission, we remove the stacked tick noise from the marsquake records by subtraction. 

#2. We further detect and remove the glitches using GlitchNet (Xu et al., 2022). 

#3. Due to gaps in the U, V, and W components, we cut and align these traces to ensure that the start and end times are the same across the U, V, and W components for each trace.

#4. We remove the instrument response (with a pre-filtering from 0.01 to 9.0 Hz) to obtain ground velocity records.

#5. We rotate the coordinate system from the original UVW to NEZ (North-East-Z) orientation using ObsPy (Beyreuther et al., 2010).
DOI: 10.15468/dl.nypf3k
title: Occurrence Download

description: A dataset containing 966 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Neafrapus boehmi (Schalow, 1882))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 966 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005386-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nysbt4
title: Occurrence Download

description: A dataset containing 447 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Costa Rica, Mexico, Guatemala, Honduras, El Salvador, Belize, United States of America, Panama, Nicaragua)",
 "OccurrenceStatus is Present",
 "TaxonKey is Radiovittaria stipitata (Kunze) E.H.Crane"
 ]
}

 The dataset includes 447 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005387-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.