cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20043124
title: The Catalogue of Vascular Plants of the Southern Cone and the Flora of Argentina: their contribution to the World Flora

description: Abstract The checklist of the vascular plants of the Southern Cone presents updated information of 19,787 taxa and 44,943 synonyms, distributed in 2,679 genera and 318 families. This checklist was prepared, and its permanently updated, using the database "Documenta Florae Australis", with the contribution of numerous researchers and institutions, and constitutes the bases for the Flora of Argentina, currently under preparation. Here we evaluate the current knowledge of vascular plants in the Southern Cone and provide a summary of the ongoing Flora of Argentina, and the significance of these projects for the World Flora on line and to the botanical studies in the region.
DOI: 10.6084/m9.figshare.20043126
title: Flora of Bolivia - where do we stand?

description: Abstract The botanical exploration of Bolivia during the last two centuries did not leave a botanical legacy in the country. Only towards the end of the 20th century Bolivia saw the start of the biology careers at its universities and the development of its own herbaria. Nowadays there are important herbaria in La Paz, Santa Cruz, Cochabamba and Sucre with collections ranging between 40,000 and 350,000 specimens. In 2014 a catalogue of the vascular flora of Bolivia was published under the auspices of the Missouri Botanical Garden, recording 15,345 species, of which 12,165 are native and 2,343 are endemic, while 694 are cultivated, 267 adventitious and 221 are naturalized. Endemic species of vascular plants add up to 2,343 species. The 286 families listed follow the APG III classification system. There are about 150 botanists in Bolivia interested in studying the country's rich flora. During a workshop organized in 2013 to promote a Flora of Bolivia, the participants established jointly a preliminary format for the taxonomic treatments. The Flora of Bolivia is planned to be an electronic, open access publication with international participation. The World Flora represents a challenge that must be tackled by circumscribing, verifying and recording all species known within our territory, and it is expected that it will have positive repercussions from and towards the ongoing Flora of Bolivia, in a similar way as the long running series of the Flora Neotropica has provided a wider picture that can be adapted and modified to fit our particular country.
DOI: 10.6084/m9.figshare.20043126.v1
title: Flora of Bolivia - where do we stand?

description: Abstract The botanical exploration of Bolivia during the last two centuries did not leave a botanical legacy in the country. Only towards the end of the 20th century Bolivia saw the start of the biology careers at its universities and the development of its own herbaria. Nowadays there are important herbaria in La Paz, Santa Cruz, Cochabamba and Sucre with collections ranging between 40,000 and 350,000 specimens. In 2014 a catalogue of the vascular flora of Bolivia was published under the auspices of the Missouri Botanical Garden, recording 15,345 species, of which 12,165 are native and 2,343 are endemic, while 694 are cultivated, 267 adventitious and 221 are naturalized. Endemic species of vascular plants add up to 2,343 species. The 286 families listed follow the APG III classification system. There are about 150 botanists in Bolivia interested in studying the country's rich flora. During a workshop organized in 2013 to promote a Flora of Bolivia, the participants established jointly a preliminary format for the taxonomic treatments. The Flora of Bolivia is planned to be an electronic, open access publication with international participation. The World Flora represents a challenge that must be tackled by circumscribing, verifying and recording all species known within our territory, and it is expected that it will have positive repercussions from and towards the ongoing Flora of Bolivia, in a similar way as the long running series of the Flora Neotropica has provided a wider picture that can be adapted and modified to fit our particular country.
DOI: 10.6084/m9.figshare.20043127.v1
title: Diversity of Brazilian Fungi

description: Abstract Knowledge about the Brazilian fungal diversity was, until 2010, recorded in few taxonomy and ecology publications, as well as in a handful of species lists. With the publication of the Catálogo de Plantas e Fungos do Brasil and the continued availability of an online list, it has been possible to aggregate this dispersed knowledge. The version presented here adds 2,111 species names to the 3,608 listed in 2010. A total of 5,719 species of fungi distributed in 1,246 genera, 102 orders and 13 phyla represents a considerable increase over the last five years, when only 924 genera and 78 orders were registered. Basidiomycota (2,741 species in 22 orders) and Ascomycota (1,881 species in 41 orders) predominate over other groups. The Atlantic Rainforest has the largest number of records, with 3,017 species, followed by Amazon Rainforest (1,050), Caatinga (999), Cerrado (638) and Pampa and Pantanal with 84 and 35 species, respectively. The Northeast region has the greatest richness (2,617 species), followed by Southeast (2,252), South (1,995), North (1,301) and Central-West (488 species). Regarding the States of the Federation, São Paulo with 1,846 species, Pernambuco with 1,611 and Rio Grande do Sul with 1,377 species are the most diverse.
DOI: 10.6084/m9.figshare.20043127
title: Diversity of Brazilian Fungi

description: Abstract Knowledge about the Brazilian fungal diversity was, until 2010, recorded in few taxonomy and ecology publications, as well as in a handful of species lists. With the publication of the Catálogo de Plantas e Fungos do Brasil and the continued availability of an online list, it has been possible to aggregate this dispersed knowledge. The version presented here adds 2,111 species names to the 3,608 listed in 2010. A total of 5,719 species of fungi distributed in 1,246 genera, 102 orders and 13 phyla represents a considerable increase over the last five years, when only 924 genera and 78 orders were registered. Basidiomycota (2,741 species in 22 orders) and Ascomycota (1,881 species in 41 orders) predominate over other groups. The Atlantic Rainforest has the largest number of records, with 3,017 species, followed by Amazon Rainforest (1,050), Caatinga (999), Cerrado (638) and Pampa and Pantanal with 84 and 35 species, respectively. The Northeast region has the greatest richness (2,617 species), followed by Southeast (2,252), South (1,995), North (1,301) and Central-West (488 species). Regarding the States of the Federation, São Paulo with 1,846 species, Pernambuco with 1,611 and Rio Grande do Sul with 1,377 species are the most diverse.
DOI: 10.6084/m9.figshare.20043129
title: Update of the Brazilian floristic list of Algae and Cyanobacteria

description: Abstract An updated synthesis of cyanobacteria and algae information is presented for Brazil aiming to refine the data gathered to date and evaluate the progress of the biodiversity knowledge about these organisms in the country since the publication of the Catálogo de Plantas e Fungos do Brasil. The results of 2015 showed an increase of 1,250 species (35.7%) when compared to 2010, reaching a total of 4,747 species. The most diverse classes in species number were the Bacillariophyceae, Conjugatophyceae, Florideophyceae, Cyanophyceae, Dinophyceae and Euglenophyceae. Bacillariophyceae and Cyanophyceae had the highest increase in species number in the five-year interval. The Southeast and South regions were the most diverse, however, the Northeast, with the states of Piauí and Sergipe, and the Central-west region, with Mato Grosso, Goiás and Distrito Federal, also stood out in the national algal biodiversity scenario. Despite the shortage of taxonomists and limited infrastructure, the results showed a significant improvement in the knowledge regarding the diversity of cyanobacteria and algae in the country during the study period, starting to even out regional geographical differences caused by subsampling.
DOI: 10.6084/m9.figshare.20043129.v1
title: Update of the Brazilian floristic list of Algae and Cyanobacteria

description: Abstract An updated synthesis of cyanobacteria and algae information is presented for Brazil aiming to refine the data gathered to date and evaluate the progress of the biodiversity knowledge about these organisms in the country since the publication of the Catálogo de Plantas e Fungos do Brasil. The results of 2015 showed an increase of 1,250 species (35.7%) when compared to 2010, reaching a total of 4,747 species. The most diverse classes in species number were the Bacillariophyceae, Conjugatophyceae, Florideophyceae, Cyanophyceae, Dinophyceae and Euglenophyceae. Bacillariophyceae and Cyanophyceae had the highest increase in species number in the five-year interval. The Southeast and South regions were the most diverse, however, the Northeast, with the states of Piauí and Sergipe, and the Central-west region, with Mato Grosso, Goiás and Distrito Federal, also stood out in the national algal biodiversity scenario. Despite the shortage of taxonomists and limited infrastructure, the results showed a significant improvement in the knowledge regarding the diversity of cyanobacteria and algae in the country during the study period, starting to even out regional geographical differences caused by subsampling.
DOI: 10.6084/m9.figshare.20043132
title: Diversity of ferns and lycophytes in Brazil

description: Abstract This compilation of ferns and lycophytes in Brazil is an update of the one published in 2010 in Catálogo de Plantas e Fungos do Brasil. The methodology consisted in collecting data from regional checklists, taxonomic revisions, and selected databases. Invited specialists improved the list accessing a website housed at the Jardim Botânico do Rio de Janeiro. The results show 1,253 species: 1,111 of ferns and 142 of lycophytes. This number is 6.5% higher than the previous one (1,176 spp.). The percentage of endemic species decreased from 38.2% to 36.7%. We recognized 36 families and 133 genera (vs. 33 families, 121 genera in 2010). The 10 most diverse families are Pteridaceae (196 spp.), Dryopteridaceae (179), Polypodiaceae (164), Hymenophyllaceae (90), Thelypteridaceae (86), Aspleniaceae (78), Lycopodiaceae (64), Selaginellaceae (55), Anemiaceae (51), and Cyatheaceae (45). The three most diverse genera are still Elaphoglossum (87 spp.), Thelypteris (85), and Asplenium (74). The richest phytogeographic domain continues to be in the Atlantic Rainforest with 883 species which also has the largest number of endemic and threatened species, followed by the Amazon Rainforest (503), Cerrado (269), Pantanal (30), Caatinga (26), and Pampa (eight). Minas Gerais remains as the richest state (657 spp. vs. 580 in 2010).
DOI: 10.6084/m9.figshare.20043132.v1
title: Diversity of ferns and lycophytes in Brazil

description: Abstract This compilation of ferns and lycophytes in Brazil is an update of the one published in 2010 in Catálogo de Plantas e Fungos do Brasil. The methodology consisted in collecting data from regional checklists, taxonomic revisions, and selected databases. Invited specialists improved the list accessing a website housed at the Jardim Botânico do Rio de Janeiro. The results show 1,253 species: 1,111 of ferns and 142 of lycophytes. This number is 6.5% higher than the previous one (1,176 spp.). The percentage of endemic species decreased from 38.2% to 36.7%. We recognized 36 families and 133 genera (vs. 33 families, 121 genera in 2010). The 10 most diverse families are Pteridaceae (196 spp.), Dryopteridaceae (179), Polypodiaceae (164), Hymenophyllaceae (90), Thelypteridaceae (86), Aspleniaceae (78), Lycopodiaceae (64), Selaginellaceae (55), Anemiaceae (51), and Cyatheaceae (45). The three most diverse genera are still Elaphoglossum (87 spp.), Thelypteris (85), and Asplenium (74). The richest phytogeographic domain continues to be in the Atlantic Rainforest with 883 species which also has the largest number of endemic and threatened species, followed by the Amazon Rainforest (503), Cerrado (269), Pantanal (30), Caatinga (26), and Pampa (eight). Minas Gerais remains as the richest state (657 spp. vs. 580 in 2010).
DOI: 10.6084/m9.figshare.20043133
title: Bryophytes diversity in Brazil

description: Abstract The bryoflora of Brazil comprises 1,524 species, 117 families, and 413 genera (11 hornworts, 633 liverworts, and 880 mosses). The most diverse families of liverworts are: Lejeuneaceae (285 species), Lepidoziaceae (48), Frullaniaceae (37), Ricciaceae (36), Plagiochilaceae (27), Radulaceae and Metzgeriaceae (26 each), Lophocoleaceae (18), Aneuraceae (15), and Calypogeiaceae (13); while, for the mosses, we have: Sphagnaceae (83 species), Fissidentaceae (65) Pottiaceae (63), Dicranaceae (54), Bryaceae and Sematophyllaceae (53 each), Orthotrichaceae and Pilotrichaceae (51 each), Calymperaceae (48), and Hypnaceae (28). These large groups account for 71% of the Brazilian bryophyte species. Lejeuneaceae and Sphagnaceae are the families with highest number of endemic taxa (54 and 60 species). The Atlantic Rainforest presents the greatest number of species (1,337), followed by the Amazon Rainforest (570) and Cerrado (478). The highest number of endemic species (242) is associated with the Atlantic Rainforest, where the Dense Ombrophilous Forest concentrates 73% of the species with 62% endemism. The Southeastern region is the most diverse in number of species (1,228) and with more endemism (219). Most endangered species are restricted to the Atlantic Rainforest of southeastern Brazil, which is the diversity and endemism centre for mosses and liverworts. The information currently presented by the Brazilian List is close to the real bryophyte diversity found in the country.
DOI: 10.6084/m9.figshare.20043133.v1
title: Bryophytes diversity in Brazil

description: Abstract The bryoflora of Brazil comprises 1,524 species, 117 families, and 413 genera (11 hornworts, 633 liverworts, and 880 mosses). The most diverse families of liverworts are: Lejeuneaceae (285 species), Lepidoziaceae (48), Frullaniaceae (37), Ricciaceae (36), Plagiochilaceae (27), Radulaceae and Metzgeriaceae (26 each), Lophocoleaceae (18), Aneuraceae (15), and Calypogeiaceae (13); while, for the mosses, we have: Sphagnaceae (83 species), Fissidentaceae (65) Pottiaceae (63), Dicranaceae (54), Bryaceae and Sematophyllaceae (53 each), Orthotrichaceae and Pilotrichaceae (51 each), Calymperaceae (48), and Hypnaceae (28). These large groups account for 71% of the Brazilian bryophyte species. Lejeuneaceae and Sphagnaceae are the families with highest number of endemic taxa (54 and 60 species). The Atlantic Rainforest presents the greatest number of species (1,337), followed by the Amazon Rainforest (570) and Cerrado (478). The highest number of endemic species (242) is associated with the Atlantic Rainforest, where the Dense Ombrophilous Forest concentrates 73% of the species with 62% endemism. The Southeastern region is the most diverse in number of species (1,228) and with more endemism (219). Most endangered species are restricted to the Atlantic Rainforest of southeastern Brazil, which is the diversity and endemism centre for mosses and liverworts. The information currently presented by the Brazilian List is close to the real bryophyte diversity found in the country.
DOI: 10.6084/m9.figshare.20043136
title: Flora of Brazil Online: Can Brazil's botanists achieve their 2020 vision?

description: Abstract This paper seeks to provide an assessment of the prospects of delivering an online Flora of Brazil by 2020. Our approach is to evaluate the nature and extent of documentation of the Brazilian flora over the past 15 years before exploring whether existing botanical documentation and capacity is sufficient to support the production of a complete Flora over a five-year period. We address the following 'headline' questions: Has a high proportion of Brazilian species been described? Are collection densities sufficient to underpin a national Flora? Is there sufficient botanical expertise available to execute such a big project over a five-year period? Are there current taxonomic treatments that support the development of a national Flora? The results obtained show that the proportion of the flora estimated to have been described is high enough to be confident that those preparing Flora treatments will not be overwhelmed by the numbers of species new to science requiring description; the national average of 1.08 specimens per km2 is significant; relevant taxonomic treatments with a variety of different scopes and geographic scales are available; and, finally the botanical expertise available is demonstrated by the results presented in the List of Species of the Flora of Brasil.
DOI: 10.6084/m9.figshare.20043136.v1
title: Flora of Brazil Online: Can Brazil's botanists achieve their 2020 vision?

description: Abstract This paper seeks to provide an assessment of the prospects of delivering an online Flora of Brazil by 2020. Our approach is to evaluate the nature and extent of documentation of the Brazilian flora over the past 15 years before exploring whether existing botanical documentation and capacity is sufficient to support the production of a complete Flora over a five-year period. We address the following 'headline' questions: Has a high proportion of Brazilian species been described? Are collection densities sufficient to underpin a national Flora? Is there sufficient botanical expertise available to execute such a big project over a five-year period? Are there current taxonomic treatments that support the development of a national Flora? The results obtained show that the proportion of the flora estimated to have been described is high enough to be confident that those preparing Flora treatments will not be overwhelmed by the numbers of species new to science requiring description; the national average of 1.08 specimens per km2 is significant; relevant taxonomic treatments with a variety of different scopes and geographic scales are available; and, finally the botanical expertise available is demonstrated by the results presented in the List of Species of the Flora of Brasil.
DOI: 10.6084/m9.figshare.20043139.v1
title: The naturalized flora of Brazil: a step towards identifying future invasive non-native species

description: Abstract Human-mediated species introductions are one of the defining factors of the Anthropocene. Non-native species can form invasive populations that affect biodiversity, ecosystem services, or farming. Here I summarized data on naturalized vascular species from the Brazilian list of seed plants and tested the hypotheses that more populated regions and biomes with less remaining natural vegetation harbor more naturalized species. The Atlantic Forest had the largest number of naturalized species, whereas the Pampa had the highest proportion of naturalized species in relation to the biome's total richness. The number of naturalized species was affected both by human population size and proportion of remaining natural vegetation. Family Poaceae had the highest numbers of naturalized species in all biomes, and, together with Asteraceae and Fabaceae, forms the top three families in number of naturalized species in five of the biomes. There were no records of species naturalized in all six biomes. However, of the 46 species naturalized in five out of six biomes, half were Poaceae. The results indicate that the Brazilian flora is currently composed both by native and naturalized species. Assessments of invasion risks and of impacts by naturalized species could help set management priorities and resource allocation towards control.
DOI: 10.6084/m9.figshare.20043139
title: The naturalized flora of Brazil: a step towards identifying future invasive non-native species

description: Abstract Human-mediated species introductions are one of the defining factors of the Anthropocene. Non-native species can form invasive populations that affect biodiversity, ecosystem services, or farming. Here I summarized data on naturalized vascular species from the Brazilian list of seed plants and tested the hypotheses that more populated regions and biomes with less remaining natural vegetation harbor more naturalized species. The Atlantic Forest had the largest number of naturalized species, whereas the Pampa had the highest proportion of naturalized species in relation to the biome's total richness. The number of naturalized species was affected both by human population size and proportion of remaining natural vegetation. Family Poaceae had the highest numbers of naturalized species in all biomes, and, together with Asteraceae and Fabaceae, forms the top three families in number of naturalized species in five of the biomes. There were no records of species naturalized in all six biomes. However, of the 46 species naturalized in five out of six biomes, half were Poaceae. The results indicate that the Brazilian flora is currently composed both by native and naturalized species. Assessments of invasion risks and of impacts by naturalized species could help set management priorities and resource allocation towards control.
DOI: 10.6084/m9.figshare.20043141.v1
title: Presumed domatia are actually extrafloral nectaries on leaves of Anacardium humile (Anacardiaceae)

description: Presumed domatia are actually extrafloral nectaries on leaves ofAnacardium humile (Anacardiaceae), a species from the Brazilian savannah, is associated with foraging ants, which leads to the description of the structure of its leaves as domatia. However, the ants collect secretions on the leaves, a phenomenon that inspired us to elucidate this structure. To this end, we conducted an analysis of the distribution, micromorphology, anatomy and histochemistry of these supposed domatia. They are located in the axil of thicker leaf veins and are composed of glandular trichomes which exude glucose; they are, therefore, described here as extrafloral nectaries (EFNs). The nectariferous trichomes are located at the same level as the other epidermal cells on young leaves, while in mature leaves they were found in depressions of the leaf blade. The secretory activity of EFNs is limited to juvenile phases, becoming degenerated in mature leaves. Carbohydrates and lipophilic compounds were detected in the produced secretion. It can be concluded that the presence of ants foraging leaves to collect from EFNs indicates a mutualistic interaction, with the plant providing a sugar resource to the ants in return for protection against herbivory since they are present in developing leaves.
DOI: 10.6084/m9.figshare.20043141
title: Presumed domatia are actually extrafloral nectaries on leaves of Anacardium humile (Anacardiaceae)

description: Presumed domatia are actually extrafloral nectaries on leaves ofAnacardium humile (Anacardiaceae), a species from the Brazilian savannah, is associated with foraging ants, which leads to the description of the structure of its leaves as domatia. However, the ants collect secretions on the leaves, a phenomenon that inspired us to elucidate this structure. To this end, we conducted an analysis of the distribution, micromorphology, anatomy and histochemistry of these supposed domatia. They are located in the axil of thicker leaf veins and are composed of glandular trichomes which exude glucose; they are, therefore, described here as extrafloral nectaries (EFNs). The nectariferous trichomes are located at the same level as the other epidermal cells on young leaves, while in mature leaves they were found in depressions of the leaf blade. The secretory activity of EFNs is limited to juvenile phases, becoming degenerated in mature leaves. Carbohydrates and lipophilic compounds were detected in the produced secretion. It can be concluded that the presence of ants foraging leaves to collect from EFNs indicates a mutualistic interaction, with the plant providing a sugar resource to the ants in return for protection against herbivory since they are present in developing leaves.