cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3819259_d7
title: Additional file 7: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: Individuals C3′H sequences. (FAS 189 kb)
DOI: 10.6084/m9.figshare.c.3819286_d2
title: Additional file 11: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: RIF scores according to RIF1 or RIF2 for transcription factors and miRNAs. Only molecules with RIF z-scores  1.40 are described. (XLS 52 kb)
DOI: 10.6084/m9.figshare.c.3819259_d8
title: Additional file 8: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: Individuals HQT sequences. (FAS 162 kb)
DOI: 10.6084/m9.figshare.c.3819286_d3.v1
title: Additional file 12: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: Factor scores of multiple factor analysis for the observations on the axis 1 and 2 in the validation set at T0. (XLS 124 kb)
DOI: 10.6084/m9.figshare.c.3819286_d3
title: Additional file 12: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: Factor scores of multiple factor analysis for the observations on the axis 1 and 2 in the validation set at T0. (XLS 124 kb)
DOI: 10.6084/m9.figshare.c.3819286_d4.v1
title: Additional file 13: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: Factor scores of multiple factor analysis for the observations on the axis 1 and 2 in the validation set at T1. (XLS 316 kb)
DOI: 10.15468/dl.2epx4q
title: Occurrence Download

description: A dataset containing 281930 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Freshwater fish of the Netherlands, 1800-2019"
 ]
}

 The dataset includes 281930 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039239-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3819286_d5.v1
title: Additional file 14: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: Expressed miRNAs. (XLSX 159 kb)
DOI: 10.6084/m9.figshare.c.3819286_d4
title: Additional file 13: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: Factor scores of multiple factor analysis for the observations on the axis 1 and 2 in the validation set at T1. (XLS 316 kb)
DOI: 10.15468/dl.g7z3av
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((74.57210 -32.94113,244.42790 -32.94113,244.42790 34.94113,74.57210 34.94113,74.57210 -32.94113))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Brontispa longissima (Gestro, 1885)"
 ]
}

 The dataset includes 33 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039246-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b5c8u6
title: Occurrence Download

description: A dataset containing 261823 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zea mays L."
 ]
}

 The dataset includes 261823 records from 917 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039241-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3819217_d15.v1
title: Additional file 5: Table S1. of Increasing quality, throughput and speed of sample preparation for strand-specific messenger RNA sequencing

description: Alignment-based metrics for reverse transcriptase comparisons. Table S2. Alignment-based metrics for the size selection experiment. Table S3. Alignment-based metrics for the comparison of library construction kits. Table S4. Alignment-based metrics for the intermediate ssRNA-seq pipeline. The protocol evaluated includes all changes (1st strand cDNA synthesis, optimal bead purifications, new library construction chemistry with modified ligation condition, bead-based size selection, and UNG treatment) with the exception of the mRNA isolation improvements. Table S5. Alignment-based metrics for the final ssRNA-seq pipeline using UHR. Table S6. Alignment-based metrics for the final ssRNA-seq pipeline using tumor samples. (XLS 62Â kb)
DOI: 10.15468/dl.66vdxa
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Senegal",
 "InstitutionCode is au",
 "TaxonKey is Blumea virens Wall. ex DC."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039247-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qz98nm
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cataetyx alleni (Byrne, 1906)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039248-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3820357_d2
title: Additional file 2: Table S4. of An efficient system for homology-dependent targeted gene integration in medaka (Oryzias latipes)

description: Oligonucleotide sequences used in this study. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3820360_d2
title: Additional file 2: Figure S1. of Security controls in an integrated Biobank to protect privacy in data sharing: rationale and study design

description: Logical configuration of the networks that form an infrastructure of the TMM biobank. Configuration of the TMM network is specified. (ZIP 53Â kb)
DOI: 10.6084/m9.figshare.c.3820342_d2
title: Additional file 2: of Molecular dating of phylogenetic divergence between Urochloa species based on complete chloroplast genomes

description: XML input file used for analysis in BEAST. (TXT 3981 kb)
DOI: 10.6084/m9.figshare.c.3820357_d5.v1
title: Additional file 5: Table S2. of An efficient system for homology-dependent targeted gene integration in medaka (Oryzias latipes)

description: The numbers of potential off-target sequences in reference genomes of teleost fish species. Numbers of genomic sites with up to 3Â bp mismatches in the total 21Â bp sequences are shown. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3820357_d5
title: Additional file 5: Table S2. of An efficient system for homology-dependent targeted gene integration in medaka (Oryzias latipes)

description: The numbers of potential off-target sequences in reference genomes of teleost fish species. Numbers of genomic sites with up to 3Â bp mismatches in the total 21Â bp sequences are shown. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3820357_d6.v1
title: Additional file 6: Table S3. of An efficient system for homology-dependent targeted gene integration in medaka (Oryzias latipes)

description: Potential off-target sites of 7 candidates of bait sequence that selected in the first screening and previously reported bait sequences. Potential off-target sites are defined as genomic sequence harboring up to 2Â bp mismatches in the total 18Â bp sequences and a NGG PAM. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3820357_d6
title: Additional file 6: Table S3. of An efficient system for homology-dependent targeted gene integration in medaka (Oryzias latipes)

description: Potential off-target sites of 7 candidates of bait sequence that selected in the first screening and previously reported bait sequences. Potential off-target sites are defined as genomic sequence harboring up to 2Â bp mismatches in the total 18Â bp sequences and a NGG PAM. (XLSX 11 kb)
DOI: 10.15468/dl.w2dq7d
title: Occurrence Download

description: A dataset containing 97624 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crocodylus porosus Schneider, 1801"
 ]
}

 The dataset includes 97624 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039244-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3820396_d5
title: Additional file 5: of Identification and characterization of a FOXA2-regulated transcriptional enhancer at a type 2 diabetes intronic locus that controls GCKR expression in liver cells

description: Raw sequencing data from HepG2, second read. (ZIP 470 kb)
DOI: 10.6084/m9.figshare.c.3820417_d1.v1
title: Additional file 1: of Understanding the impact of supervision on reducing medication risks: an interview study in long-term elderly care

description: Indicator medication safety incidents year 2007_2008_2009. This file contains self-reported indicators from all care facilities over the years 2007-2009. The indicator represents the percentage of patients that encountered a medication incident during the month prior to the measurement of the indicator. (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.c.3820417_d1
title: Additional file 1: of Understanding the impact of supervision on reducing medication risks: an interview study in long-term elderly care

description: Indicator medication safety incidents year 2007_2008_2009. This file contains self-reported indicators from all care facilities over the years 2007-2009. The indicator represents the percentage of patients that encountered a medication incident during the month prior to the measurement of the indicator. (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.c.3820417_d2
title: Additional file 2: of Understanding the impact of supervision on reducing medication risks: an interview study in long-term elderly care

description: Indicator medication safety incidents year 2010_2011_2012. This file contains self-reported indicators from all care facilities over the years 2010-2012. The indicator represents the percentage of patients that encountered a medication incident during the month prior to the measurement of the indicator. (XLSX 36Â kb)
DOI: 10.6084/m9.figshare.c.3820417_d2.v1
title: Additional file 2: of Understanding the impact of supervision on reducing medication risks: an interview study in long-term elderly care

description: Indicator medication safety incidents year 2010_2011_2012. This file contains self-reported indicators from all care facilities over the years 2010-2012. The indicator represents the percentage of patients that encountered a medication incident during the month prior to the measurement of the indicator. (XLSX 36Â kb)
DOI: 10.6084/m9.figshare.c.3820420_d2.v1
title: Additional file 2: Table S1. of Intravenous neutralization of vascular endothelial growth factor reduces vascular function/permeability of the ovary and prevents development of OHSS-like symptoms in rhesus monkeys

description: Follicular Fluid/Aspiration Analyses of Control COS and COSÂ +Â Avastin Pre-hCG Stimulations. Excel Spreadsheet. (XLSX 11 kb)
DOI: 10.15468/dl.wzkgxe
title: Occurrence Download

description: A dataset containing 233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cataetyx rubrirostris Gilbert, 1890",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 233 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039249-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3820498_d2
title: MOESM2 of Metabolic labeling in middle-down proteomics allows for investigation of the dynamics of the histone code

description: Additional file 2: Table S1. Bottom-up MS quantification of epithelial cells grown in light and heavy KR medium and mixed 1:1. Relative abundance of bottom-up-sized histone peptides labeled with light and heavy KR. The first columns display the relative abundance of the same peptide in unlabeled (light) versus heavy KR-labeled form. The columns H/L ratio represents the ratio of the peptides between heavy and light. On the top right, average of H/L ratios across all detected peptides and respective standard deviation. On the bottom right, correlation analysis and significance estimated using the t test.
DOI: 10.6084/m9.figshare.c.3820498_d4.v1
title: MOESM4 of Metabolic labeling in middle-down proteomics allows for investigation of the dynamics of the histone code

description: Additional file 4: Table S3. Relative abundance of combinatorial PTMs in the EMT experiment including heavy methylation labeling. Labeling is illustrated in Fig.Â 2b; briefly, epithelial cells were plated into heavy methionine media during mesenchymal transition. Biological replicates were performed for the not confluent experiment. On the right, deconvoluted abundance of single histone marks. On the further right, alignment with results obtained from the bottom-up analysis on the same samples. Confluent experiment results are listed in the second sheet.
DOI: 10.5517/ccdc.csd.cc2d8hkr
title: CCDC 2212704: Experimental Crystal Structure Determination

description: Related Article: Shengxian Cheng, Jing Ouyang, Muqing Li, Yingxue Diao, Jiachen Yao, Fengxing Li, Yat-For Lee, Herman Ho-Yung SUNG, Ian Williams, Zhengtao Xu, Yangjian Quan|2023|Angew.Chem.,Int.Ed.|62|e202300993|doi:10.1002/anie.202300993
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3820498_d3.v1
title: MOESM3 of Metabolic labeling in middle-down proteomics allows for investigation of the dynamics of the histone code

description: Additional file 3: Table S2. Quantification of middle-down-sized polypeptides during EMT. Labeling is illustrated in Additional file: Fig. S1a; briefly, epithelial cells were plated into heavy KR media during mesenchymal transition. Unlabeled and heavy KR-labeled histone tails are defined as old and new, respectively. Two biological replicates were performed for each experiment. On the right, correlation analysis and significance estimated using the t test.
DOI: 10.5517/ccdc.csd.cc2fddmw
title: CCDC 2246248: Experimental Crystal Structure Determination

description: Related Article: Yu-Cheng Tang, Zhi-Shuo Wang, Heng Yi, Mu-Yang Zhou, Dong-Dong Zhou, Jie-Peng Zhang, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303374|doi:10.1002/anie.202303374
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fddnx
title: CCDC 2246249: Experimental Crystal Structure Determination

description: Related Article: Yu-Cheng Tang, Zhi-Shuo Wang, Heng Yi, Mu-Yang Zhou, Dong-Dong Zhou, Jie-Peng Zhang, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303374|doi:10.1002/anie.202303374
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d83rk
title: CCDC 2212338: Experimental Crystal Structure Determination

description: Related Article: Wen-Bin Li, Ying Wu, Xiao-Feng Zhong, Xiong-Hai Chen, Gang Liang, Jia-Wen Ye, Zong-Wen Mo, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303500|doi:10.1002/anie.202303500
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fddpy
title: CCDC 2246250: Experimental Crystal Structure Determination

description: Related Article: Yu-Cheng Tang, Zhi-Shuo Wang, Heng Yi, Mu-Yang Zhou, Dong-Dong Zhou, Jie-Peng Zhang, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303374|doi:10.1002/anie.202303374
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3820498_d4
title: MOESM4 of Metabolic labeling in middle-down proteomics allows for investigation of the dynamics of the histone code

description: Additional file 4: Table S3. Relative abundance of combinatorial PTMs in the EMT experiment including heavy methylation labeling. Labeling is illustrated in Fig.Â 2b; briefly, epithelial cells were plated into heavy methionine media during mesenchymal transition. Biological replicates were performed for the not confluent experiment. On the right, deconvoluted abundance of single histone marks. On the further right, alignment with results obtained from the bottom-up analysis on the same samples. Confluent experiment results are listed in the second sheet.
DOI: 10.5517/ccdc.csd.cc2d83zs
title: CCDC 2212345: Experimental Crystal Structure Determination

description: Related Article: Wen-Bin Li, Ying Wu, Xiao-Feng Zhong, Xiong-Hai Chen, Gang Liang, Jia-Wen Ye, Zong-Wen Mo, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303500|doi:10.1002/anie.202303500
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3820498_d3
title: MOESM3 of Metabolic labeling in middle-down proteomics allows for investigation of the dynamics of the histone code

description: Additional file 3: Table S2. Quantification of middle-down-sized polypeptides during EMT. Labeling is illustrated in Additional file: Fig. S1a; briefly, epithelial cells were plated into heavy KR media during mesenchymal transition. Unlabeled and heavy KR-labeled histone tails are defined as old and new, respectively. Two biological replicates were performed for each experiment. On the right, correlation analysis and significance estimated using the t test.
DOI: 10.5517/ccdc.csd.cc2d840v
title: CCDC 2212346: Experimental Crystal Structure Determination

description: Related Article: Wen-Bin Li, Ying Wu, Xiao-Feng Zhong, Xiong-Hai Chen, Gang Liang, Jia-Wen Ye, Zong-Wen Mo, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303500|doi:10.1002/anie.202303500
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d841w
title: CCDC 2212347: Experimental Crystal Structure Determination

description: Related Article: Wen-Bin Li, Ying Wu, Xiao-Feng Zhong, Xiong-Hai Chen, Gang Liang, Jia-Wen Ye, Zong-Wen Mo, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303500|doi:10.1002/anie.202303500
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d842x
title: CCDC 2212348: Experimental Crystal Structure Determination

description: Related Article: Wen-Bin Li, Ying Wu, Xiao-Feng Zhong, Xiong-Hai Chen, Gang Liang, Jia-Wen Ye, Zong-Wen Mo, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303500|doi:10.1002/anie.202303500
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d844z
title: CCDC 2212350: Experimental Crystal Structure Determination

description: Related Article: Wen-Bin Li, Ying Wu, Xiao-Feng Zhong, Xiong-Hai Chen, Gang Liang, Jia-Wen Ye, Zong-Wen Mo, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303500|doi:10.1002/anie.202303500
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d8450
title: CCDC 2212351: Experimental Crystal Structure Determination

description: Related Article: Wen-Bin Li, Ying Wu, Xiao-Feng Zhong, Xiong-Hai Chen, Gang Liang, Jia-Wen Ye, Zong-Wen Mo, Xiao-Ming Chen|2023|Angew.Chem.,Int.Ed.|62|e202303500|doi:10.1002/anie.202303500
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.