cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7501343
title: Clinical performance indicators for monitoring the management of cutaneous melanoma: a population-based perspective

description: The prognosis of cutaneous malignant melanoma (CMM) is based on disease progression. The highly heterogeneous clinical-pathological characteristics of CMM necessitate standardized diagnostic and therapeutic interventions tailored to cancer's stage. This study utilizes clinical performance indicators to assess the quality of CMM care in Veneto (Northeast Italy). This population-based study focuses on all incidences of CMMs registered by the Veneto Cancer Registry in 2015 (1279 patients) and 2017 (1368 patients). An interdisciplinary panel of experts formulated a set of quality-monitoring indicators for diagnostic, therapeutic, and end-of-life clinical interventions for CMM. The quality of clinical care for patients was assessed by comparing the reference thresholds established by experts to the actual values obtained in clinical practice. The prevalence of stage I-CMM decreased significantly from 2015 to 2017 (from 71.8 to 62.4%; P &lt; 0.001), and almost all the pathology reports mentioned the number of nodes dissected during a lymphadenectomy. More than 90% of advanced CMMs were promptly tested for molecular BRAF status, but the proportion of patients given targeted therapies fell short of the desired threshold (61.1%). The proportion of stage I-IIA CMM patients who inappropriately underwent computerized tomography/MRI/PET dropped from 17.4 to 3.3% ( P &lt; 0.001). Less than 2% of patients received medical or surgical anticancer therapies in the month preceding their death. In the investigated regional context, CMM care exhibited both strengths and weaknesses. The evaluated clinical indicators shed essential insight on the clinical procedures requiring corrective action. It is crucial to monitor clinical care indicators to improve care for cancer patients and promote the sustainability of the healthcare system.
DOI: 10.5281/zenodo.7501342
title: Clinical performance indicators for monitoring the management of cutaneous melanoma: a population-based perspective

description: The prognosis of cutaneous malignant melanoma (CMM) is based on disease progression. The highly heterogeneous clinical-pathological characteristics of CMM necessitate standardized diagnostic and therapeutic interventions tailored to cancer's stage. This study utilizes clinical performance indicators to assess the quality of CMM care in Veneto (Northeast Italy). This population-based study focuses on all incidences of CMMs registered by the Veneto Cancer Registry in 2015 (1279 patients) and 2017 (1368 patients). An interdisciplinary panel of experts formulated a set of quality-monitoring indicators for diagnostic, therapeutic, and end-of-life clinical interventions for CMM. The quality of clinical care for patients was assessed by comparing the reference thresholds established by experts to the actual values obtained in clinical practice. The prevalence of stage I-CMM decreased significantly from 2015 to 2017 (from 71.8 to 62.4%; P &lt; 0.001), and almost all the pathology reports mentioned the number of nodes dissected during a lymphadenectomy. More than 90% of advanced CMMs were promptly tested for molecular BRAF status, but the proportion of patients given targeted therapies fell short of the desired threshold (61.1%). The proportion of stage I-IIA CMM patients who inappropriately underwent computerized tomography/MRI/PET dropped from 17.4 to 3.3% ( P &lt; 0.001). Less than 2% of patients received medical or surgical anticancer therapies in the month preceding their death. In the investigated regional context, CMM care exhibited both strengths and weaknesses. The evaluated clinical indicators shed essential insight on the clinical procedures requiring corrective action. It is crucial to monitor clinical care indicators to improve care for cancer patients and promote the sustainability of the healthcare system.
DOI: 10.5281/zenodo.7488296
title: Health professionals KAP on rabies

description: Data set for online access to health professionals KAP study on rabies exposure assessment and vaccine adminstration.
DOI: 10.5287/bodleian:dpxmpjy88
title: Raw data for Figures for The impact of COVID-19 public health restrictions on particulate matter pollution measured by a validated low-cost sensor network in Oxford, UK
DOI: 10.5287/bodleian:go5ema1go
title: Calculations of inlet:outlet pollutant ratios for internal combustion engines
DOI: 10.3886/e138181v1-131582
title: Data and Code for: "Hungry for Success? SNAP Timing, High-Stakes Exam Performance, and College Attendance"

description: <pre>Monthly government transfer programs create cycles of consumption that track the timing of benefit receipt. If these cycles correspond to critical moments of student learning and achievement, the timing of transfers may have important long-run implications for low-income students. In this paper, we exploit state-level variation in the staggered timing of nutritional assistance benefit issuance to analyze effects on academic achievement. Using individual-level data from a large national college admissions exam, we find that taking this high-stakes exam in the last two weeks of the SNAP benefit cycle reduces test scores and lowers the probability of attending a 4-year college.</pre>
DOI: 10.57745/cidlko
title: mock_DADA2.zip

description: ASV table counts yielded by the dada2_ITS_mock_benchmark.sh script
DOI: 10.57745/azwkas
title: curated_idtaxa_03022022.tax

description: Curated taxanomy database for nematodes (obtained from https://www.nemabiome.ca/its2-database.html and described in Workentine et al. 2020).
DOI: 10.57745/ifyy92
title: Cya_Str_cox1_BOLD_GB_mito.fasta

description: COI database extraced from BOLD, GENBANK and mitogenome sequences
DOI: 10.57745/vmbg00
title: scripts_for_sub.zip

description: Compressed directory with all scripts used for analysing the data.
DOI: 10.57745/4wz4zu
title: curated_nemaca_ITS2_Strongylidae.fasta

description: Curated ITS-2 sequence database for nematodes (obtained from https://www.nemabiome.ca/its2-database.html and described in Workentine et al. 2020).
DOI: 10.57745/d0h8ds
title: barcode.ipynb

description: python script to compute similarity across sequences and output a COI consensus sequence
DOI: 10.57745/gj7uhs
title: NMB_COMP_rev081122_git.R

description: R script used for data analysis and paper preparation
DOI: 10.57745/gm2p5h
title: multiplot.R

description: :unav
DOI: 10.57745/rsay05
title: life_stage.zip

description: Contains two folders corresponding to the data processing of amplicon sequencing data applied to different life-stages and processed with the best set of parameters.
DOI: 10.5281/zenodo.7501711
title: PERTEMUAN 2_05 JANUARY 2023_Perngertian dan Dasar Hukum Pph_PERPAJAKAN_UNIVERSITAS WIJAYA PUTRA PRIGEN JAM 18.00-21.30

description: <strong>Capaian Pembelajaran Mata Kuliah (CPMK)</strong> <strong>Setelah</strong><strong> </strong><strong>megikuti</strong><strong> </strong><strong>perkuliahan</strong><strong> </strong><strong>ini</strong><strong> </strong><strong>mahasiswa</strong><strong> </strong><strong>Mampu</strong><strong> </strong><strong>menjelaskan</strong><strong> </strong><strong>pengertian</strong><strong> </strong><strong>dan</strong><strong> </strong><strong>dasar</strong><strong> </strong><strong>hukum</strong><strong> </strong><strong>PPh</strong> <strong>Indikator</strong><strong> </strong><strong>Pembelajaran</strong> Gambaran Umum tentang Pajak Penghasilan (PPh) 1.Pengertian dan Dasar Hukum; 2.Garis Besar Penghitungan PPh. 3.Subjek PPh 1) Subjek dan bukan subjek PPh; 2) Mulai dan berakhirnya kewajiban pajak subjektif.
description: PERTEMUAN 2_05 JANUARY 2023_Perngertian dan Dasar Hukum Pph_PERPAJAKAN_UNIVERSITAS WIJAYA PUTRA PRIGEN JAM 18.00-21.30
DOI: 10.5281/zenodo.7501710
title: PERTEMUAN 2_05 JANUARY 2023_Perngertian dan Dasar Hukum Pph_PERPAJAKAN_UNIVERSITAS WIJAYA PUTRA PRIGEN JAM 18.00-21.30

description: <strong>Capaian Pembelajaran Mata Kuliah (CPMK)</strong> <strong>Setelah</strong><strong> </strong><strong>megikuti</strong><strong> </strong><strong>perkuliahan</strong><strong> </strong><strong>ini</strong><strong> </strong><strong>mahasiswa</strong><strong> </strong><strong>Mampu</strong><strong> </strong><strong>menjelaskan</strong><strong> </strong><strong>pengertian</strong><strong> </strong><strong>dan</strong><strong> </strong><strong>dasar</strong><strong> </strong><strong>hukum</strong><strong> </strong><strong>PPh</strong> <strong>Indikator</strong><strong> </strong><strong>Pembelajaran</strong> Gambaran Umum tentang Pajak Penghasilan (PPh) 1.Pengertian dan Dasar Hukum; 2.Garis Besar Penghitungan PPh. 3.Subjek PPh 1) Subjek dan bukan subjek PPh; 2) Mulai dan berakhirnya kewajiban pajak subjektif.
description: PERTEMUAN 2_05 JANUARY 2023_Perngertian dan Dasar Hukum Pph_PERPAJAKAN_UNIVERSITAS WIJAYA PUTRA PRIGEN JAM 18.00-21.30
DOI: 10.5281/zenodo.7501696
title: Dataset related to article "Intrahepatic CD69 + Vδ1 T cells re-circulate in the blood of patients with metastatic colorectal cancer and limit tumor progression"

description: This record contains raw data related to article “Intrahepatic CD69 + Vδ1 T cells re-circulate in the blood of patients with metastatic colorectal cancer and limit tumor progression" Abstract <strong>Background: </strong> More than 50% of all patients with colorectal cancer (CRC) develop liver metastases (CLM), a clinical condition characterized by poor prognosis and lack of reliable prognostic markers. Vδ1 cells are a subset of tissue-resident gamma delta (γδ) T lymphocytes endowed with a broad array of antitumor functions and showing a natural high tropism for the liver. However, little is known about their impact in the clinical outcomes of CLM. <strong>Methods: </strong> We isolated human γδ T cells from peripheral blood (PB) and peritumoral (PT) tissue of 93 patients undergone surgical procedures to remove CLM. The phenotype of freshly purified γδ T cells was assessed by multiparametric flow cytometry, the transcriptional profiles by single cell RNA-sequencing, the functional annotations by Gene Ontology enrichment analyses and the clonotype by γδ T cell receptor (TCR)-sequencing. <strong>Results: </strong> The microenvironment of CLM is characterized by a heterogeneous immune infiltrate comprising different subsets of γδ tumor-infiltrating lymphocytes (TILs) able to egress the liver and re-circulate in PB. Vδ1 T cells represent the largest population of γδ TILs within the PT compartment of CLM that is greatly enriched in Vδ1 T effector (T<sub>EF</sub>) cells expressing constitutive high levels of CD69. These Vδ1 CD69<sup>+</sup> TILs express a distinct phenotype and transcriptional signature, show high antitumor potential and correlate with better patient clinical outcomes in terms of lower numbers of liver metastatic lesions and longer overall survival (OS). Moreover, intrahepatic CD69<sup>+</sup> Vδ1 TILs can egress CLM tissue to re-circulate in PB, where they retain a phenotype, transcriptional signature and TCR clonal repertoires resembling their liver origin. Importantly, even the increased frequencies of the CD69<sup>+</sup> terminally differentiated (T<sub>EMRA</sub>) Vδ1 cells in PB of patients with CLM significantly correlate with longer OS. The positive prognostic score of high frequencies of CD69<sup>+</sup> T<sub>EMRA</sub> Vδ1 cells in PB is independent from the neoadjuvant chemotherapy and immunotherapy regimens administered to patients with CLM prior surgery. <strong>Conclusions: </strong> The enrichment of tissue-resident CD69<sup>+</sup> Vδ1 T<sub>EMRA</sub> cells re-circulating at high frequencies in PB of patients with CLM limits tumor progression and represents a new important clinical tool to either predict the natural history of CLM or develop alternative therapeutic protocols of cellular therapies.
DOI: 10.5281/zenodo.7501695
title: Dataset related to article "Intrahepatic CD69 + Vδ1 T cells re-circulate in the blood of patients with metastatic colorectal cancer and limit tumor progression"

description: This record contains raw data related to article “Intrahepatic CD69 + Vδ1 T cells re-circulate in the blood of patients with metastatic colorectal cancer and limit tumor progression" Abstract <strong>Background: </strong> More than 50% of all patients with colorectal cancer (CRC) develop liver metastases (CLM), a clinical condition characterized by poor prognosis and lack of reliable prognostic markers. Vδ1 cells are a subset of tissue-resident gamma delta (γδ) T lymphocytes endowed with a broad array of antitumor functions and showing a natural high tropism for the liver. However, little is known about their impact in the clinical outcomes of CLM. <strong>Methods: </strong> We isolated human γδ T cells from peripheral blood (PB) and peritumoral (PT) tissue of 93 patients undergone surgical procedures to remove CLM. The phenotype of freshly purified γδ T cells was assessed by multiparametric flow cytometry, the transcriptional profiles by single cell RNA-sequencing, the functional annotations by Gene Ontology enrichment analyses and the clonotype by γδ T cell receptor (TCR)-sequencing. <strong>Results: </strong> The microenvironment of CLM is characterized by a heterogeneous immune infiltrate comprising different subsets of γδ tumor-infiltrating lymphocytes (TILs) able to egress the liver and re-circulate in PB. Vδ1 T cells represent the largest population of γδ TILs within the PT compartment of CLM that is greatly enriched in Vδ1 T effector (T<sub>EF</sub>) cells expressing constitutive high levels of CD69. These Vδ1 CD69<sup>+</sup> TILs express a distinct phenotype and transcriptional signature, show high antitumor potential and correlate with better patient clinical outcomes in terms of lower numbers of liver metastatic lesions and longer overall survival (OS). Moreover, intrahepatic CD69<sup>+</sup> Vδ1 TILs can egress CLM tissue to re-circulate in PB, where they retain a phenotype, transcriptional signature and TCR clonal repertoires resembling their liver origin. Importantly, even the increased frequencies of the CD69<sup>+</sup> terminally differentiated (T<sub>EMRA</sub>) Vδ1 cells in PB of patients with CLM significantly correlate with longer OS. The positive prognostic score of high frequencies of CD69<sup>+</sup> T<sub>EMRA</sub> Vδ1 cells in PB is independent from the neoadjuvant chemotherapy and immunotherapy regimens administered to patients with CLM prior surgery. <strong>Conclusions: </strong> The enrichment of tissue-resident CD69<sup>+</sup> Vδ1 T<sub>EMRA</sub> cells re-circulating at high frequencies in PB of patients with CLM limits tumor progression and represents a new important clinical tool to either predict the natural history of CLM or develop alternative therapeutic protocols of cellular therapies.
DOI: 10.5281/zenodo.7501723
title: Dataset for publication "Fate of charge order in overdoped La-based cuprates"

description: Dataset providing the sourcedata of the main figures in the publication "Fate of charge order in overdoped La-based cuprates".
DOI: 10.5281/zenodo.7501722
title: Dataset for publication "Fate of charge order in overdoped La-based cuprates"

description: Dataset providing the sourcedata of the main figures in the publication "Fate of charge order in overdoped La-based cuprates".
DOI: 10.5517/ccdc.csd.cc2bp4sz
title: CCDC 2165281: Experimental Crystal Structure Determination

description: Related Article: Tomasz Pawlak, Piotr Paluch, Rafał Dolot, Grzegorz Bujacz, Marek J. Potrzebowski|2022|Solid State Nucl.Magn.Reson.|122|101820|doi:10.1016/j.ssnmr.2022.101820
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bp507
title: CCDC 2165288: Experimental Crystal Structure Determination

description: Related Article: Tomasz Pawlak, Piotr Paluch, Rafał Dolot, Grzegorz Bujacz, Marek J. Potrzebowski|2022|Solid State Nucl.Magn.Reson.|122|101820|doi:10.1016/j.ssnmr.2022.101820
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byg2v
title: CCDC 2173257: Experimental Crystal Structure Determination

description: Related Article: Tomasz Pawlak, Piotr Paluch, Rafał Dolot, Grzegorz Bujacz, Marek J. Potrzebowski|2022|Solid State Nucl.Magn.Reson.|122|101820|doi:10.1016/j.ssnmr.2022.101820
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c0vx5
title: CCDC 2175577: Experimental Crystal Structure Determination

description: Related Article: Jingjie Tan, Chaopeng Hu, Xin Yang, Shaoying Ju, Levy L. Cao, Yile Wu, Liu Leo Liu, Douglas W. Stephan|2022|Chem.Commun.|59|282|doi:10.1039/D2CC06075B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c0wfq
title: CCDC 2175593: Experimental Crystal Structure Determination

description: Related Article: Jingjie Tan, Chaopeng Hu, Xin Yang, Shaoying Ju, Levy L. Cao, Yile Wu, Liu Leo Liu, Douglas W. Stephan|2022|Chem.Commun.|59|282|doi:10.1039/D2CC06075B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c18xm
title: CCDC 2175980: Experimental Crystal Structure Determination

description: Related Article: Ningbo Li|2022|CSD Communication|||
description: Related Article: Ning-Bo Li, Shuo Gu, Chu-Qian Hu, Yu-Xin Wang, Xue Zhou, Jie Qiao, Jun Jiang, Hong-Tao Ji, Wei-Min He|2022|New J.Chem.|47|660|doi:10.1039/D2NJ05304G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c30k2
title: CCDC 2177643: Experimental Crystal Structure Determination

description: Related Article: Jingjie Tan, Chaopeng Hu, Xin Yang, Shaoying Ju, Levy L. Cao, Yile Wu, Liu Leo Liu, Douglas W. Stephan|2022|Chem.Commun.|59|282|doi:10.1039/D2CC06075B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c9x9x
title: CCDC 2184269: Experimental Crystal Structure Determination

description: Related Article: Ming-Yue Wang, Yun-Yue Yuan, Zhen-Qing Qi, Jia-Yi Chen, Zhan-Guo Jiang, Cai-Hong Zhan|2022|Chem.Mater.|34|10501|doi:10.1021/acs.chemmater.2c02560
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2chbw3
title: CCDC 2189495: Experimental Crystal Structure Determination

description: Related Article: Xiao-Kang Huang, Li-Ping Li, Hai-Yun Zhou, Ming-Feng Xiong, Jing-Yan Fan, Bao-Hui Ye|2022|Inorg.Chem.|61|20834|doi:10.1021/acs.inorgchem.2c03161
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2chpg1
title: CCDC 2189823: Experimental Crystal Structure Determination

description: Related Article: Dong-Dong Xu, Wen-Wen Dong, Meng-Ke Li, Hui-Min Han, Jun Zhao, Dong-Sheng Li, Qichun Zhang|2022|Inorg.Chem.|61|21107|doi:10.1021/acs.inorgchem.2c03736
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2chph2
title: CCDC 2189824: Experimental Crystal Structure Determination

description: Related Article: Dong-Dong Xu, Wen-Wen Dong, Meng-Ke Li, Hui-Min Han, Jun Zhao, Dong-Sheng Li, Qichun Zhang|2022|Inorg.Chem.|61|21107|doi:10.1021/acs.inorgchem.2c03736
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ck9mw
title: CCDC 2191378: Experimental Crystal Structure Determination

description: Related Article: Christian. L. Jankovic, F. G. West|2022|Org.Lett.|24|9497|doi:10.1021/acs.orglett.2c03978
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ck9nx
title: CCDC 2191379: Experimental Crystal Structure Determination

description: Related Article: Christian. L. Jankovic, F. G. West|2022|Org.Lett.|24|9497|doi:10.1021/acs.orglett.2c03978
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.