cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7710776.v1
title: Using climate change models to assess the probability of weather extremes events: a local scale study based on the generalized extreme value distribution

description: ABSTRACT Regional climate models (e.g. Eta) nested to global climate models (e.g. HadGEM2-ES and MIROC5) have been used to assess potential impacts of climate change at regional scales. This study used the generalized extreme value distribution (GEV) to evaluate the ability of two nested models (Eta-HadGEM2-ES and Eta-MIROC5) to assess the probability of daily extremes of air temperature and precipitation in the location of Campinas, state of São Paulo, Brazil. Within a control run (1961-2005), correction factors based on the GEV parameters have been proposed to approach the distributions generated from the models to those built from the weather station of Campinas. Both models were also used to estimate the probability of daily extremes of air temperature (maximum and minimum) and precipitation for the 2041-2070 period. Two concentration paths of greenhouse gases (RCP 4.5 and 8.5) have been considered. Although both models project changes to warmer conditions, the responses of Eta-Hadgem2-ES to both RCPs are significantly larger than that of Eta-Miroc5. While Eta-Hadgem2-ES suggests the location of Campinas will be free from agronomic frost events, Eta-Miroc5 indicates that air temperature values equal to or lower than 5 and 2 °C are expected to present a cumulative probabilityof ~0.20 and ~0.05, respectively (RCP 8.5). Moreover, while the Eta-Miroc5 projected a reduction in the extreme-precipitation amounts, the Eta-Hadgem2-ES projected implausible large daily precipitation amounts. The Eta-Miroc5 performed better than the Eta-Hadgem2-ES for assessing the probability of air temperature and precipitation in Campinas. This latter statement holds particularly true for daily-extreme precipitation data.
DOI: 10.6084/m9.figshare.7710767.v1
title: Estimates of genetic parameters between and within black oat populations

description: ABSTRACT The aims of this study were to characterize black oat populations by estimating between- and within-populations variance components and genetic parameters, as well as to distinguish the populations using multivariable statistics. The experiment was carried out in randomized blocks design with three repetitions, with 14 black oat populations collected in several municipalities of Rio Grande do Sul state. Agronomic important traits were assessed at physiological maturation stage. Variance components and genetic parameters were estimated considering within-block information. In addition, Mahalanobis distance, relative contribution of traits, and canonical variables were used to distinguish the populations. Selection based on panicle length, number of grains per panicle, panicle weight and panicle grain weight may result in higher selection gains. Panicle grain weight presents a greater contribution to genetic divergence between studied populations. The formation of distinct groups indicated the presence of genetic variability among black oat populations in the northwestern of the Rio Grande do Sul state. Directed crosses between individual plants of populations from (i) Alto Alegre and Salvador das Missões, Chapada, or Santa Rosa or (ii) between plants of populations from Salvador das Missões and Campos Borges or Santa Rosa can generate segregating populations with great genetic variability. The predominance of between-phenotypic variance and a within-genetic variance indicate prospects for success in selection gain and possible selection of a new cultivar with fewer efforts compared to a cross-based method. This is supported by the high values of within-population heritability.
DOI: 10.7284/114578
title: Water Temperature data collected during research cruise AT26-06 using a Sea-Bird SBE-48 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7710755
title: New rhizobia strains isolated from the Amazon region fix atmospheric nitrogen in symbiosis with cowpea and increase its yield

description: ABSTRACT Studies in the Amazon indicate a wide diversity of rhizobia with the ability for biological nitrogen fixation (BNF), which could expand the number of strains approved for cowpea. Thus, the aim of this field study was to evaluate the agronomic performance in cowpea of the several strains isolated from the soils of the Brazilian states Acre and Rondônia, and to compare them withstrains approved by the Ministry of Agriculture (MAPA) and withnon-inoculated controls (without and with mineral nitrogen fertilizer). The inoculants performed well. Though less effective than the other strains, the UFLA 03-36 strain also was prominent with respect to grain yield. Because of the positive response of the UFLA 03-129 strain, which led to yield increases greater than the obtained from the control without inoculation plus mineral-N, it can be recommended as an inoculum for cowpea. Further investigations should be carried out to obtain MAPA’s approval for their use. Other experiments involving this strain and several cultivars are being carried out on other types of soil and environmental conditions of the state of Minas Gerais.
DOI: 10.6084/m9.figshare.7710749
title: Effectiveness of the monitoring program for ensuring the quality of water treated for dialysis in the state of São Paulo

description: ABSTRACT Introduction: Chronic kidney failure is a disease that affects the functions of the kidneys and can cause irreversible kidney failure over time. Among the main factors that cause this disease are hypertension and diabetes mellitus. The number of patients presenting this clinical condition has been increasing in Brazil, leading to an increase in renal replacement therapy, such as hemodialysis. Material and methods: In the state of São Paulo, a joint action between the Adolfo Lutz Institute, the Sanitary Surveillance Center, and the Sanitary Surveillance Groups have promoted the State Program for the Monitoring of Water Treated for Dialysis since 2007 to evaluate the chemical and microbiological quality of the water used in dialysis in compliance with the current legislation. Objective: This study aimed to evaluate the monitoring program developed between 2010 and 2016 as a tool for corrective action when unsatisfactory results are observed. Results: The level of satisfactory results during the period varied from 85.8 to 98.0%, indicating an increase in the adequacy of the dialysis services in producing water with adequate quality for patient health. Conclusion: The design adopted in the state monitoring program is highly effective based on new collections after the joint actions of the Sanitary Surveillance System and the State Dialysis Services.
DOI: 10.6084/m9.figshare.7710752
title: Use of a species-rich and highly eutrophic tropical estuary in the South Atlantic by Pleuronectiformes (Teleostei: Acanthopterygii)

description: Abstract: A total of 1,471 specimens of 16 species of flatfishes (Pleuronectiformes) were caught during 48 sampling campaigns between July 2005 and June 2007 at ten stations in Guanabara Bay, Rio de Janeiro, Brazil. Paralichthyidae was the dominant family, with Etropus crossotus as the dominant species. The outer stations, especially those on the western side of the lower estuary, were distinguished as a result of their higher abundance of flatfishes and number of species. The spatial distribution of E. crossotus and its population structure indicate that this species is an estuarine resident despite the apparent reduction in its area of occupation within the estuarine complex. Among the other species, nine were classified as marine stragglers (Achirus declivis, Bothus ocellatus, Cyclopsetta chittendeni, Etropus longimanus, Paralichthys orbignyanus, P. patagonicus, Syacium micrurum, Symphurus diomedeanus and Trinectes paulistanus) and three as estuarine opportunists (Bothus robinsi, Citharichthys macrops and Syacium papillosum); another three could not be classified due to the small number of captures or lack of previous data (S. tessellatus, A. lineatus and C. spilopterus).
DOI: 10.6084/m9.figshare.7710755.v1
title: New rhizobia strains isolated from the Amazon region fix atmospheric nitrogen in symbiosis with cowpea and increase its yield

description: ABSTRACT Studies in the Amazon indicate a wide diversity of rhizobia with the ability for biological nitrogen fixation (BNF), which could expand the number of strains approved for cowpea. Thus, the aim of this field study was to evaluate the agronomic performance in cowpea of the several strains isolated from the soils of the Brazilian states Acre and Rondônia, and to compare them withstrains approved by the Ministry of Agriculture (MAPA) and withnon-inoculated controls (without and with mineral nitrogen fertilizer). The inoculants performed well. Though less effective than the other strains, the UFLA 03-36 strain also was prominent with respect to grain yield. Because of the positive response of the UFLA 03-129 strain, which led to yield increases greater than the obtained from the control without inoculation plus mineral-N, it can be recommended as an inoculum for cowpea. Further investigations should be carried out to obtain MAPA’s approval for their use. Other experiments involving this strain and several cultivars are being carried out on other types of soil and environmental conditions of the state of Minas Gerais.
DOI: 10.7284/114524
title: TSG (Thermosalinograph) data collected during research cruise AT26-06 using a Sea-Bird SBE-45 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7710743
title: Plasticity in the timing of activity in the Red-rumped Agouti, Dasyprocta leporina (Mammalia: Rodentia), in the Atlantic Forest of southeastern Brazil

description: Abstract Timing of activity is a consequence of adaptations to daily and seasonal changes in the environment and examining these patterns is important to better understand the temporal niches of the species. Here we examine temporal activity in the Red-rumped Agouti (Dasyprocta leporina) in two fragments of Atlantic Forest and those factors that influence the circadian rhythm in the study areas. Camera traps were used to gather data in two protected areas (one montane and other coastal) in the state of Espírito Santo, southeastern Brazil. A total of 49 photos were taken in the mountains and 152 in the coastal area. Activity patterns were diurnal and bimodal, and animals were active for 14-15 hours each day. Activity peaked in the morning soon after sunrise and then before and during dusk. Activity patterns were different in the two study areas (W = 6.77, p = 0.034). There was a longer peak in the morning in the coastal area, and a higher peak in the evening in the mountains, where activity starts later and becomes less intense earlier. The difference between activity patterns in the two locations suggests plasticity in agouti behavior. Because the two study areas are at about the same latitude, we suggest that the behavioral plasticity is due to different temperature regimes associated with a local effect of altitude and topography of the terrain on the incidence of solar rays inside the forest. The influence of other factors is also discussed. In addition to a better understanding of the temporal niche of the Red-rumped Agouti, the behavior patterns we describe here can be useful to optimize strategies for D. leporina conservation in southeastern Brazil once the species is more susceptible to poaching at times when animals are most active.
DOI: 10.6084/m9.figshare.7710749.v1
title: Effectiveness of the monitoring program for ensuring the quality of water treated for dialysis in the state of São Paulo

description: ABSTRACT Introduction: Chronic kidney failure is a disease that affects the functions of the kidneys and can cause irreversible kidney failure over time. Among the main factors that cause this disease are hypertension and diabetes mellitus. The number of patients presenting this clinical condition has been increasing in Brazil, leading to an increase in renal replacement therapy, such as hemodialysis. Material and methods: In the state of São Paulo, a joint action between the Adolfo Lutz Institute, the Sanitary Surveillance Center, and the Sanitary Surveillance Groups have promoted the State Program for the Monitoring of Water Treated for Dialysis since 2007 to evaluate the chemical and microbiological quality of the water used in dialysis in compliance with the current legislation. Objective: This study aimed to evaluate the monitoring program developed between 2010 and 2016 as a tool for corrective action when unsatisfactory results are observed. Results: The level of satisfactory results during the period varied from 85.8 to 98.0%, indicating an increase in the adequacy of the dialysis services in producing water with adequate quality for patient health. Conclusion: The design adopted in the state monitoring program is highly effective based on new collections after the joint actions of the Sanitary Surveillance System and the State Dialysis Services.
DOI: 10.6084/m9.figshare.7710752.v1
title: Use of a species-rich and highly eutrophic tropical estuary in the South Atlantic by Pleuronectiformes (Teleostei: Acanthopterygii)

description: Abstract: A total of 1,471 specimens of 16 species of flatfishes (Pleuronectiformes) were caught during 48 sampling campaigns between July 2005 and June 2007 at ten stations in Guanabara Bay, Rio de Janeiro, Brazil. Paralichthyidae was the dominant family, with Etropus crossotus as the dominant species. The outer stations, especially those on the western side of the lower estuary, were distinguished as a result of their higher abundance of flatfishes and number of species. The spatial distribution of E. crossotus and its population structure indicate that this species is an estuarine resident despite the apparent reduction in its area of occupation within the estuarine complex. Among the other species, nine were classified as marine stragglers (Achirus declivis, Bothus ocellatus, Cyclopsetta chittendeni, Etropus longimanus, Paralichthys orbignyanus, P. patagonicus, Syacium micrurum, Symphurus diomedeanus and Trinectes paulistanus) and three as estuarine opportunists (Bothus robinsi, Citharichthys macrops and Syacium papillosum); another three could not be classified due to the small number of captures or lack of previous data (S. tessellatus, A. lineatus and C. spilopterus).
DOI: 10.6084/m9.figshare.7710737
title: Treehopper (Membracidae, Auchenorrhyncha) assemblages in four semi-arid areas of caatinga of Northeast Brazil

description: Abstract Treehopper assemblages were sampled in four semi-arid areas of caatinga in Northeast Brazil during the rainy seasons of 2016 and 2017, using three different capture methods. The areas are located in two Ecoregions of the Caatinga: “Depressão Sertaneja Setentrional” (Northern Sertaneja Depression) and “Planalto da Borborema” (Borborema Plateau). A total of 2,394 individuals of 43 species were sampled, corresponding to approximately 87% of the mean estimated species richness for all four areas. The species richness varied among the areas from 14 to 21, while the abundance of individuals ranged from 129 to 1860. Eighteen species were shared among areas, of which only Enchenopa eunicea, Sundarion sp. 1, Ceresa vitulus and Erosne parvula occurred in all four due to the general behavior of the first three and the wide distribution of host plant of Erosne parvula - Mimosa tenuiflora. Twenty-five species occurred only in one area, of which 23 were categorized as rare with a maximum of eight individuals sampled, and seven with only one individual collected (singletons). Considering that the Caatinga Domain possesses at least nine Ecoregions with different climates, geomorphology and vegetation, along with marked endemism of plants, it is expected that the species richness of treehoppers will increase substantially on a regional scale.
DOI: 10.6084/m9.figshare.7710743.v1
title: Plasticity in the timing of activity in the Red-rumped Agouti, Dasyprocta leporina (Mammalia: Rodentia), in the Atlantic Forest of southeastern Brazil

description: Abstract Timing of activity is a consequence of adaptations to daily and seasonal changes in the environment and examining these patterns is important to better understand the temporal niches of the species. Here we examine temporal activity in the Red-rumped Agouti (Dasyprocta leporina) in two fragments of Atlantic Forest and those factors that influence the circadian rhythm in the study areas. Camera traps were used to gather data in two protected areas (one montane and other coastal) in the state of Espírito Santo, southeastern Brazil. A total of 49 photos were taken in the mountains and 152 in the coastal area. Activity patterns were diurnal and bimodal, and animals were active for 14-15 hours each day. Activity peaked in the morning soon after sunrise and then before and during dusk. Activity patterns were different in the two study areas (W = 6.77, p = 0.034). There was a longer peak in the morning in the coastal area, and a higher peak in the evening in the mountains, where activity starts later and becomes less intense earlier. The difference between activity patterns in the two locations suggests plasticity in agouti behavior. Because the two study areas are at about the same latitude, we suggest that the behavioral plasticity is due to different temperature regimes associated with a local effect of altitude and topography of the terrain on the incidence of solar rays inside the forest. The influence of other factors is also discussed. In addition to a better understanding of the temporal niche of the Red-rumped Agouti, the behavior patterns we describe here can be useful to optimize strategies for D. leporina conservation in southeastern Brazil once the species is more susceptible to poaching at times when animals are most active.
DOI: 10.7284/112063
title: Multiplexed data collected during research cruise AT26-07 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7710737.v1
title: Treehopper (Membracidae, Auchenorrhyncha) assemblages in four semi-arid areas of caatinga of Northeast Brazil

description: Abstract Treehopper assemblages were sampled in four semi-arid areas of caatinga in Northeast Brazil during the rainy seasons of 2016 and 2017, using three different capture methods. The areas are located in two Ecoregions of the Caatinga: “Depressão Sertaneja Setentrional” (Northern Sertaneja Depression) and “Planalto da Borborema” (Borborema Plateau). A total of 2,394 individuals of 43 species were sampled, corresponding to approximately 87% of the mean estimated species richness for all four areas. The species richness varied among the areas from 14 to 21, while the abundance of individuals ranged from 129 to 1860. Eighteen species were shared among areas, of which only Enchenopa eunicea, Sundarion sp. 1, Ceresa vitulus and Erosne parvula occurred in all four due to the general behavior of the first three and the wide distribution of host plant of Erosne parvula - Mimosa tenuiflora. Twenty-five species occurred only in one area, of which 23 were categorized as rare with a maximum of eight individuals sampled, and seven with only one individual collected (singletons). Considering that the Caatinga Domain possesses at least nine Ecoregions with different climates, geomorphology and vegetation, along with marked endemism of plants, it is expected that the species richness of treehoppers will increase substantially on a regional scale.
DOI: 10.6084/m9.figshare.7710728
title: Antibacterial and anti-biofilm activity of cinnamon essential oil and eugenol

description: ABSTRACT: Biofilms are responsible for most of the interference caused by microorganisms in food processing. The aim of this study was to evaluate the cinnamon (Cinnamomum zeylanicum) essential oil and eugenol sanitizer and anti-biofilm activity against biofilms. Concentrations used of essential oil were 0.0% (control) 0.12%; 0.48%; 0.96% and 1.92%; the amount of eugenol was 0.76%. Concentrations were determined from other published studies. Number of viable cells and quantification the bacterial biomass were determined. Anti-biofilm treatment was effective in preventing the formation of biofilms. The 1.92% concentration was the most satisfactorily with Escherichia coli reduction of 5.91log CFUcm-2 and Staphylococcus aureus reduction of 5.17log CFUcm-2 (P&lt;0.05) biomass of the two bacteria. Sanitizing treatment was not effective in reducing biomass. Seen this, the cinnamon and eugenol essential oil may be promising alternatives for controlling biofilms.
DOI: 10.6084/m9.figshare.7710728.v1
title: Antibacterial and anti-biofilm activity of cinnamon essential oil and eugenol

description: ABSTRACT: Biofilms are responsible for most of the interference caused by microorganisms in food processing. The aim of this study was to evaluate the cinnamon (Cinnamomum zeylanicum) essential oil and eugenol sanitizer and anti-biofilm activity against biofilms. Concentrations used of essential oil were 0.0% (control) 0.12%; 0.48%; 0.96% and 1.92%; the amount of eugenol was 0.76%. Concentrations were determined from other published studies. Number of viable cells and quantification the bacterial biomass were determined. Anti-biofilm treatment was effective in preventing the formation of biofilms. The 1.92% concentration was the most satisfactorily with Escherichia coli reduction of 5.91log CFUcm-2 and Staphylococcus aureus reduction of 5.17log CFUcm-2 (P&lt;0.05) biomass of the two bacteria. Sanitizing treatment was not effective in reducing biomass. Seen this, the cinnamon and eugenol essential oil may be promising alternatives for controlling biofilms.
DOI: 10.7284/112065
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT26-07 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7710716
title: Post-harvest conservation of Passiflora alata fruits under ambient and refrigerated condition

description: Abstract Brazil is the world's largest producer of passion fruit, a perishable fruit with reduced post-harvest shelf life, which limits its commercialization. For sweet passion fruit, Passiflora alata, there is little information about its postharvest conservation and shelf life under different storage conditions. Thus, the objective of the present study was to determine the post-harvest conservation of P. alata fruits packed on styrofoam trays rapped with 10 μm PVC film and HDPE 30 μm thick, coated with 18% carnauba wax and without any packaging; stored under ambient conditions (25 °C and 70% relative humidity) and refrigerated (10 °C and 90% relative humidity) for 14 days. The best results were obtained with P. alata fruits packaged on styrofoam trays rapped with 10 μm PVC flexible film and kept under refrigeration in a cold room at a temperature of 10 °C and relative humidity between 85% and 90% for a period of 10 to 14 days. Fruits of P. alata , for commercialization “in natura”, kept under ambient conditions, should not be packaged and have a shelf life of up to seven days.