cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28212617.v1
title: Figure 7 <b>New-to-nature glycolate reduction in PLP-aux strain</b>

description: Figure 7 <b>New-to-nature glycolate reduction in PLP-aux strain</b>
DOI: 10.15468/dl.wxcprb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Platytroctes Günther, 1878",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((44.9648 1.2321,45.9851 1.8496,44.9648 1.8496,44.9648 1.2321))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013041-250525065834625/datasets/export for details.
DOI: 10.17632/3vcstwdbrn
title: Fukushima and Pollock, Supplementary Data 

description: Supplementary Data for Fukushima and Pollock (2020, Nature Communications 11:4459)
https://www.nature.com/articles/s41467-020-18090-8
DOI: 10.17632/frp34bs8w9
title: Annual 30m Resolution Forest Cover Change Data: A Comprehensive Dataset for Vavuniya District, Sri Lanka

description: This dataset can be used to assess changes over a long period at the district level, and to identify and monitor deforestation and forest degradation. This information is essential for implementing forest management planning, forest restoration activities, land use planning, biodiversity conservation, and climate change mitigation initiatives. The dataset was generated using Landsat 5 TM and Landsat 8 OLI satellite imagery. It is a valuable resource for future research, providing a foundation for significant advancements in this district.
DOI: 10.17632/rtfmf8649f
title: Gene Expression Profile of Selected Fasciola hepatica Gene Families Implicated in Triclabendazole Resistance

description: Fasciolosis is caused by liver flukes: F. hepatica, and a sister species – F. gigantica. A growing 
concern with controlling the disease is resistance to triclabendazole (TCBZ), the only drug 
shown to kill both adult and immature liver flukes. Currently, F. hepatica mechanism of 
resistance to TCBZ is not clearly understood and there is no effective commercially available 
vaccine. Previous work proposed three mechanisms associated with TCBZ mode of action 
and resistance: tubulin binding activity, drug uptake mechanisms, and drug metabolism 
mechanism. Exploring evolutionary forces acting on F. hepatica genes associated with TCBZ 
mode of action and resistance could explain how the parasite develops resistance to the 
drug, enable identification of potential drug targets, and facilitate development of new 
drugs.

The expression profile of the genes associated with TCBZ mode of action was assessed 
across F. hepatica life stages. Findings indicate that tubulin gene expression was elevated in 
metacercariae and newly excysted juveniles (NEJs), with a peak expression pattern noticed 
in NEJs 1 hour post excystment, with levels reducing in flukes 21 days post excystment. 
Similarly, in genes associated with TCBZ uptake, expression was predominantly raised in 
metacercariae and NEJs, while gene expression gradually reduced towards fluke maturity. 

The effect of TCBZ on F. hepatica was investigated in experimentally infected sheep. 
Parasite response to the drug in TCBZ resistant and susceptible F. hepatica isolates was 
compared in sheep infected and treated with the drug. TCBZ treatment induced gene 
expression patterns were noticed in 72% (90 out 125 genes, P &lt; 0.05) of all the genes
assessed (excluding unexpressed genes and constitutively expressed genes). Findings in this 
study indicate TCBZ administration affects multiple mechanisms in the parasite. Therefore, 
this confirms that all the three proposed TCBZ mode of action and resistance mechanisms in 
F. hepatica could be implicated in drug TCBZ resistance.
DOI: 10.6084/m9.figshare.16722955.v1
title: Prisma Checklist

description: Systematic Literature Review PRISMA Checklist and Flow Diagram
DOI: 10.6084/m9.figshare.27316320.v1
title: Distribution Data of Wildlife Survey Sites on the Qinghai Tibet Plateau (2023)

description: The Qinghai Tibet Plateau is a key habitat for wildlife, and in order to effectively protect the biodiversity of this ecologically fragile area, it is particularly important to conduct comprehensive research on the distribution of wildlife in the Qinghai Tibet Plateau region. This dataset contains the occurrence locations of wild animals recorded during a field survey conducted in the Qinghai Tibet Plateau region in 2023. During the survey period, we drove along a predetermined road route at a speed of approximately 20 kilometers per hour and recorded all groups of ungulates observed on both sides of the sample line. We focused on recording the spatial distribution of five important ungulates, including the Tibetan wild donkey (<i>Equus kiang</i>), Tibetan antelope (<i>Pantholops Hodgsonii</i>), Tibetan gazelle (<i>Procapra picicaudata</i>), and wild yak (<i>Bos mutus</i>), forming a wild animal point distribution dataset. This dataset provides the latitude and longitude coordinates of the occurrence points and the number of occurrences, providing important data support for ecological research and wildlife conservation work in the Qinghai Tibet Plateau ecosystem.
DOI: 10.6084/m9.figshare.7889753.v1
title: gVCF_HG01305

description: 1000 Genomes gVCF mapped to hs37d5 for HG01305. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.15468/dl.23eswh
title: Occurrence Download

description: A dataset containing 139 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Parthenium integrifolium L.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 139 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013040-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/6bcpkytp52
title: Economic freedom, inclusive growth, and financial development: A heterogeneous panel analysis of less financially developed countries

description: PANEL DATA OF 72 LESS FINANCIALLY DEVELOPED COUNTRIES
DOI: 10.17632/hy3pthv26k
title: Database for qualitative analysis. Complement of the review: Mapping Current Research on Hydrogen Supply Chain Design for International Trade

description: This dataset contains a database of papers selected for qualitative literature analysis. This database complements a systematic review that lays the groundwork for developing a framework to design a hydrogen supply chain for exportation. The review thoroughly evaluates existing studies on the components of a global hydrogen supply chain network design and identifies key factors for creating an export-oriented hydrogen supply chain network.
DOI: 10.6084/m9.figshare.12162390.v1
title: GTT-1-protein-003.dcd

description: Trajectories dataTrajectories of WW domain
DOI: 10.17632/gpvjxsdzjr
title: Dataset of perspectives of the world economy’s development after the COVID-19 crisis

description: The article reflects the possibilities of a dataset of the prospects for the development of the world economy after the COVID-19 crisis. The dataset has combined statistics on digital competitiveness, sustainable development and COVID-19 incidence for 63 countries of the world, including both developed and developing countries. The data are combined in a common table in an editable format and prepared for calculations with any level of automation. Thanks to this, the dataset is a convenient digital database for conducting a cross-country overview of trends and prospects for the development of the world economy in and after the COVID-19 crisis from the standpoint of sustainability (and stability) and accelerated digital growth. Basic statistics systematized and aggregated in a dataset can be used for various scientific research The growth obtained and presented in the dataset for all 63 countries of the sample is especially useful for scientific research on the 2020 crisis.Dataset overcomes the lack of data on the impact of the pandemic and the COVID-19 crisis on economic systems, filling this gap with accurate quantitative data on large a sample of developed and developing countries. The practical significance and usefulness of the dataset also lies in the fact that it assesses the lost profit (lost opportunities in 2020) due to the COVID-19 crisis, increasing digital competitiveness and sustainable development in 2020 across the entire sample of 63 countries of the world. Loss of profits reflects the difference between simple gains in 2020 over 2019 (due to a variety of factors) and crisis-influenced gains (due to the COVID-19 pandemic). This provided data on how the global economy might have developed in 2020 had it not been for the crisis, which could be useful for scientific research. The dataset contains a forecast for the development of the world economy after the COVID-19 crisis for 2021 according to the scenario of overcoming the viral threat (reducing the incidence to 5%) and according to the scenario of reducing the viral threat and the formation of the normal incidence (increasing the incidence up to 100%). This forecast is useful for scientific research requiring analytical support and predictive data. The advantage of the forecast is the alternativeness of the considered scenarios, which makes it possible to use the forecast in a wide range of scientific research. Even if a forecast is not required for a number of studies, it can be used as a case study of using a dataset.
DOI: 10.17632/w82ygwjy9c
title: Mobile phone data-extracted daily activities of rural residents in Chengdu, China

description: This dataset contains the characteristics of rural residents' daily activities in Chengdu, China, extracted from the mobile phone locations produced by China Unicom between April 12 and 18, 2017. The characteristics of daily activities are evaluated by grids of 1000m*1000m. The whole city is divided into 14,856 grids. The characteristics include the number of distinct destination grids visited by the residents of a grid (diversity), the average number of activities/movements conducted by the residents of a grid (number), and the standard distances of work and nonwork activities conducted by the residents of a grid. For privacy, the information of grids where less than ten residents are identified is omitted. We also include the centroid coordinates, distance to the Chengdu city, average slope, and proportion of urban workers of each grid.
DOI: 10.6084/m9.figshare.23701863.v1
title: <b>Towards Health Equity and Transformative Action on tribal health (THETA) project dataset</b>

description: Under the Towards Health Equity and Transformative Action on Tribal Health (THETA) study, data were collected from 5 sites which includes two sites in Karnataka (BR Hills and MM Hills), one site in Madhya Pradesh (Kanha Tiger Reserve), one site in Kerala (Wayanad Tiger Reserve), and one site in Arunachal Pradesh (Pakke Tiger Reserve).THETA study protocol is published in Wellcome Open ResearchIndividual identifiers, such as name, address, and phone number, were removed from the dataset in compliance with the ethics committee.
DOI: 10.6084/m9.figshare.28052783.v2
title: Raw and Supplementary Data

description: The SARS-CoV-2 induced disease; COVID-19 remains a worldwide public health concern for its high rate of transmission even in vaccinated and previously infected people. In the endemic state, it continues to cause significant pathology. To elucidate the viral mutational changes and screening the emergence of new variants of concern, we conducted this study in Bangladesh. The viral RNA genomes extracted from randomly collected 25 samples from a time period of March 2021 to February 2022 were sequenced using Illumina COVID Seq protocol and genomic data processing and evaluation was performed in DRAGEN COVID Lineage software. In this study, the percentage of Delta, Omicron and Mauritius variants identified were 88%, 8%, and 4%, respectively. All of the 25 samples had 23403A&gt;G (D614G, S gene), 3037 C&gt;T (nsp3) and 14408 C&gt;T (nsp12) mutations, where 23403 A&gt;G was responsible for increased transmission. Omicron had the highest number of unique mutations in spike protein (i.e., substitutions, deletions and insertions) which may explain its more transmissibility and immune evading ability than Delta. A total of 779 mutations were identified where 691 substitution, 85 deletion and 3 insertion mutations were observed. To sum up, our study will enrich the genomic database of SARS-CoV-2, aiding treatment strategy along with understanding the virus’s preferences in both mutation type and site for predicting newly emerged virus’s survival strategy and thus for being prepared to counteract them.
DOI: 10.6084/m9.figshare.28180610.v1
title: Data from: Short-Term Inhibition and Long-Term Enhancement of IrreversibleTrace Metal Binding to Goethite in Multi-Metal Systems

description: These files include the data used in all figures from the following paper: Short-Term Inhibition and Long-Term Enhancement of Irreversible Trace Metal Binding to Goethite in Multi-Metal SystemsBelow is a brief description of each of the figures and associated data.Fig 1. Ni adsorption isotherms to goethite in the presence and absence of Zn and CdFig 2. % of Ni, Zn, and Cd exchanged as a function of time in isotope exchange experiments conducted after 2 days, 30 days, and 60 days aging.Fig. 3. This shows the % of Ni, Cd, and Zn in single metal and mixed metal systems that is non-exchangeable, both in units of % non-exchangeable and in micromoles of metal per gram of goethite.Fig. 4. Particle size distributions of Ni-Zn and Ni-Cd systems after aging.Fig 5. Ni and Zn XANES fits for Ni-Cd and Ni-Zn systems after 30 and 60 days aging. Linear combination fits were performed between freshly adsorbed and incorporated phases (synthesized as Ni- or Zn-substituted goethite) to determine the proportions of each. Figure S1. Dissolved Metal Concentrations at the Start of Isotope ExchangeFigure S2. Reactor pH with AgingFigure S3. Dissolved Cd and Ni Concentrations during Isotope ExchangeFigure S4. Dissolved Zn and Ni Concentrations during Isotope ExchangeFigure S5. Tracer Mole Fractions in Ni-Zn Isotope Exchange ExperimentsFigure S6. Tracer Mole Fractions in Ni-Cd Isotope Exchange Experiments
DOI: 10.17632/c2wyd8ry6t
title: Data and code for the paper: "Plant-solitary bee networks have stable cores but variable peripheries under differing agricultural management: Bioindicator nodes unveiled"

description: Data and code for the paper "Plant-solitary bee networks have stable cores but variable peripheries under differing agricultural management: Bioindicator nodes unveiled".
DOI: 10.6084/m9.figshare.12003654.v1
title: Data of the apparent respiratory quotient measurements in soil and tree stems, February 2017 to January 2019, Odem forest, Israel.

description: The files contain data of gaseous CO2 and O2 measurements of soil pore space air and headspace air of incubations of bulk-soil samples, roots, and tree stem cores. Samples were collected from Odem forest, northern Israel, located 950 m a.s.l, 33o 13’ N, 35o 45’ E. The climate is Mesic Mediterranean with a mean annual precipitation of 950 mm and summer and winter mean temperature of 21.3º C and 7.3ºC, respectively. Samples from two oak species were collected: the dominant evergreen Quercus calliprinos Webb (about 75% of the woody cover area), and the winter-deciduous Quercus boissieri Reut. (15%). Soil samples were collected underneath the trees. The soil was formed on basaltic bedrock and is classified as Eutric Lithosol in the FAO classification system and as Lithic Xerorthent in the USDA classification system. The soil pH is 6.6 and the organic C content is 10.5%. These data include CO2 and O2 concentrations, fluxes, the apparent respiratory quotient (ARQ), soil temperature, gravimetric soil moisture, and Fe2+ concentrations. The data are the results of seasonal measurements of soil gas, bulk soil, tree stem cores, and roots incubations, and additional experiments testing the links between Fe2+ oxidation, temperature, and soil moisture with ARQ.
DOI: 10.6084/m9.figshare.16166931.v1
title: Wind speed

description: Gridded wind speed (at 2 meters) dataset at 0.01° for Perú. Mean value during 1981-2016.
DOI: 10.6084/m9.figshare.18316556.v1
title: Data for-Northwestern Pacific tropical cyclone activity enhanced by increased Asian dust emissions during the Little Ice Age

description: Sand content of core ZM01
DOI: 10.17632/39hr8dx76p
title: Potential Dysgraphia Handwriting Dataset of School-Age Children

description: Dysgraphia is characterized as a learning disability in which a person lacks writing skills that are expected for his or her age and cognitive level. Despite this, phrases such as handwriting difficulties or delayed writing performance in children are used to indicate dysgraphia. It has an effect on both the handwriting product (legibility of the written trace) and the writing process (movement that generates the trace). The dysgraphia dataset is an image-shaped dataset that contains images of children's writings that may be dysgraphia-related. These datasets were gathered through data collection techniques carried out by primary school students and children undertaking interventions at the Malaysian Dyslexia Association (PDM). Two PDM authorities then evaluated the dataset to determine whether the handwriting had potential dysgraphia or low potential dysgraphia. This dataset is used to determine the risk of dysgraphia in children. Machine learning techniques can be used to implement this data. This dataset has two types of dysgraphia levels: potential dysgraphia and low potential dysgraphia. Through the geometric characteristics and features of the writing in the image, this dataset could potentially be utilized to determine the presence of dysgraphia symptoms.
DOI: 10.17632/jr36ntmzsh
title: hg38 and mm10 1kb GC and mappability files

description: hg38 and mm10 GC and mappability files, suitable for use in linCNV and other genomics pipelines. Files *.gc5Base.bin_1000.bed.gz are the average fractional GC content, files *.kmer_50.bin_1000.bed.gz are the average fractional mappability using a kmer size of 50.
$ zcat hg38.gc5Base.bin_1000.bed.gz | head -n4
chr1    10000   11000   200     0.646   .
chr1    11000   12000   200     0.543   .
chr1    12000   13000   200     0.6     .
chr1    13000   14000   200     0.575   .
$ zcat hg38.kmer_50.bin_1000.bed.gz | head -n4
chr1    10000   11000   .       0.155   .
chr1    11000   12000   .       0.105   .
chr1    13000   14000   .       0.056   .
chr1    14000   15000   .       0.05    .
DOI: 10.6084/m9.figshare.14294750.v1
title: ASSESSMENT OF HEART RATE VARIABILITY (HRV) IN SUBJECTS WITH TYPE 2 DIABETES MELLITUS WITH AND WITHOUT DIABETIC FOOT: CORRELATIONS WITH ENDOTHELIAL DYSFUNCTION INDICES AND MARKERS OF ADIPO-INFLAMMATORY DYSFUNCTION

description: The aim of this study was to evaluate the degree of alteration of sympathovagal balance, assessed by HRV analysis, in a cohort of patients with diabetes mellitus with diabetic foot and in control subjects without diabetic foot compared with a population of healthy subjects and the possible correlation of HRV parameters with inflammatory markers and endothelial dysfunction indices. <b><i>Methods: </i></b>We enrolled all patients with diabetic ulcerative lesions of the lower limb in the Internal Medicine with Stroke Care ward of P. Giaccone University Hospital of Palermo between September <i>2019 and July 2020.</i><i> 4-hour ECG Holter was performed. </i><i>The following time domain HRV measures were analyzed: average heart rate, square root of the mean of successive differences of NN (RMSSD), standard deviation or square root of the variance (SD), and standard deviation of the means of the NN intervals calculated over </i>a five-minute period (SDANN/5 min). The LF/HF ratio was calculated, reactive hyperemia was evaluated by endo-PAT, and<i> </i>serum levels of vaspine and omentin-1 [Ed1] were assessed by blood sample collection. <b>Results: </b>Patients with diabetic ulcers showed lower mean diastolic blood pressure values ​​than healthy controls, lower MMSE scores corrected for age, lower serum levels of omentin-1, lower RHI values, higher body weight values ​​and comparable body height values, HF% and LF/HF ratio values. We also reported a negative correlation between the RHI value and HRV indices and the expression of increased parasympathetic activity (RMSDD and HF%) in subjects with diabetic foot and a statistically significant positive correlation with the LF/HF ratio and the expression of the sympathovagal balance. <b>Discussion</b><b>:</b> Endothelial dysfunction and reduced sympathetic activity are closely related to the pathogenesis of diabetic ulcers, as endothelial dysfunction and the consequent microangiopathy of the vasa nervorum involve a downregulation of the small autonomic-sympathetic fibers present in the periphery. [Ed1]Please ensure that the intended meaning is maintained with this edit, here and throughout the manuscript.
DOI: 10.6084/m9.figshare.19165460.v1
title: Response of an orb spider to tuning forks

description: Responses and reaction time of the orb spider <i>Metellina segmentata </i>in response to stimulations of a metal wire (to spider) and 256 Hz and 440 Hz tuning forks (to web).
DOI: 10.6084/m9.figshare.28089716.v1
title: SPIRIT checklist

description: Protocol checklist for a randomized control trial that will test and compare the effectiveness, usability, uptake, and acceptability of an educative mobile health application prototype on oral cancer against a web-based educational resource on oral cancer.
DOI: 10.6084/m9.figshare.13140146.v1
title: Data from "Fine-root traits in the global spectrum of plant form and function" (Carmona et al. 2021 Nature)

description: Data includes the average trait values at the species level for six aboveground traits (Above_traits.txt), four fine-root traits (Root_traits.txt), information on woodiness at the species level (woodiness_1218sp.txt), taxonomical information for the species (Above_taxonomy.txt), information about the biomes in which species are present (biomes_1218sp.txt), and information about the average temperature and precipitation in each biome (Climate_biomes.rds).The R material includes ten scripts to replicate the analyses from the manuscript, a script (00_All analyses.R) that can be executed to perform these analyses in the correct order, and a script with auxiliary functions ("Aux_functions.R").
DOI: 10.6084/m9.figshare.16965124.v1
title: (Al,FeOOH)_acousticwavevelocity_dataset.xlsx

description: Acoustic wave velocity dataset of δ-(Al,Fe)OOH single crystals at high pressure conditions<br>
DOI: 10.6084/m9.figshare.20739379.v1
title: GN135_ALL_Variants_noindelsSB_EFFless2.vcf

description: Filtered SNPs for effect on coding change.
DOI: 10.6084/m9.figshare.25126961.v1
title: Involution of Brown Adipose Tissue through a Syntaxin 4 Dependent Pyroptosis Pathway

description: All source data related with the paper