cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25921/cb7k-yz22
title: NOAA/WDS Paleoclimatology - Wilson - Old Glory - PCEN - ITRDB CANA229

description: Tree ring data from the International Tree Ring Data Bank and World Data Center for Paleoclimatology archives.  Most data sets include raw treering measurements (most are annual ring width, with some collections of earlywood or latewood width or wood density), plus chronologies (standardized growth indices for a site compiled from multiple treering samples). Reconstructions of climate variables are included with some of these data sets.  Each data type is stored in a separate data file; the data type is coded into the file name. For details please see: http://www.ncdc.noaa.gov/paleo/treeinfo.htmll
description: NOAA Template Raw Measurements file added 2019-01-27. NOAA Template Raw Measurements file added 2019-02-04.
DOI: 10.5517/cc60bj1
title: CCDC 179072: Experimental Crystal Structure Determination

description: Related Article: H.Kondo, K.Matsubara, H.Nagashima|2002|J.Am.Chem.Soc.|124|534|doi:10.1021/ja016899h
description: Related Article: T.Hayashida, H.Kondo, J.Terasawa, K.Kirchner, Y.Sunada, H.Nagashima|2007|J.Organomet.Chem.|692|382|doi:10.1016/j.jorganchem.2006.08.069
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc60bk2
title: CCDC 179073: Experimental Crystal Structure Determination

description: Related Article: H.Kondo, K.Matsubara, H.Nagashima|2002|J.Am.Chem.Soc.|124|534|doi:10.1021/ja016899h
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.17315563
title: Filtered Carlson et al. 2025 OPS dataset for EBOV 28hpi Huh7 cells

description: Primary genomewide screen data of Huh7 cells infected with EBOV and fixed 28 hours post infection (hpi) from Carlson et al. 2025 paper (https://doi-org.ezproxy.bu.edu/10.1038/s41564-025-02034-3), filtered to contain only relevant columns for downstream analysis (gene_symbol, VP35_median_cell, FISH_median_cell, JUN_median_nuclear).  Only gene knockouts which were analyzed in the secondary screen are included (n=113).  Nontargeting control gene_symbol values were altered from original dataset (which contained sgRNA data) to just be identified as "nontargeting".  Column time_hpi was added to reflect the 28 hpi time point.
DOI: 10.5281/zenodo.17315564
title: Filtered Carlson et al. 2025 OPS dataset for EBOV 28hpi Huh7 cells

description: Primary genomewide screen data of Huh7 cells infected with EBOV and fixed 28 hours post infection (hpi) from Carlson et al. 2025 paper (https://doi-org.ezproxy.bu.edu/10.1038/s41564-025-02034-3), filtered to contain only relevant columns for downstream analysis (gene_symbol, VP35_median_cell, FISH_median_cell, JUN_median_nuclear).  Only gene knockouts which were analyzed in the secondary screen are included (n=113).  Nontargeting control gene_symbol values were altered from original dataset (which contained sgRNA data) to just be identified as "nontargeting".  Column time_hpi was added to reflect the 28 hpi time point.
DOI: 10.5517/cc60bn5
title: CCDC 179076: Experimental Crystal Structure Determination

description: Related Article: I.Katsuki, Y.Motoda, Y.Sunatsuki, N.Matsumoto, T.Nakashima, M.Kojima|2002|J.Am.Chem.Soc.|124|629|doi:10.1021/ja0123960
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc60bp6
title: CCDC 179077: Experimental Crystal Structure Determination

description: Related Article: I.Katsuki, Y.Motoda, Y.Sunatsuki, N.Matsumoto, T.Nakashima, M.Kojima|2002|J.Am.Chem.Soc.|124|629|doi:10.1021/ja0123960
description: Related Article: H.Nakamura, Y.Sunatsuki, M.Kojima, N.Matsumoto|2007|Inorg.Chem.|46|8170|doi:10.1021/ic070286+
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25921/c9va-8k88
title: NOAA/WDS Paleoclimatology - Graybill - Noon Creek - PIPO - ITRDB AZ528

description: Tree ring data from the International Tree Ring Data Bank and World Data Center for Paleoclimatology archives.  Most data sets include raw treering measurements (most are annual ring width, with some collections of earlywood or latewood width or wood density), plus chronologies (standardized growth indices for a site compiled from multiple treering samples). Reconstructions of climate variables are included with some of these data sets.  Each data type is stored in a separate data file; the data type is coded into the file name. For details please see: http://www.ncdc.noaa.gov/paleo/treeinfo.htmll
description: NOAA Template Chronology file added 2018-12-20. NOAA Template Raw Measurements file added 2019-02-08.
DOI: 10.5517/cc60bq7
title: CCDC 179078: Experimental Crystal Structure Determination

description: Related Article: I.Katsuki, Y.Motoda, Y.Sunatsuki, N.Matsumoto, T.Nakashima, M.Kojima|2002|J.Am.Chem.Soc.|124|629|doi:10.1021/ja0123960
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25921/cm4h-hy12
title: NOAA/WDS Paleoclimatology - Esper - Kyrgyzstan Low Gra - JUSP - ITRDB KYRG004

description: We present an analysis of 28 juniper tree-ring sites sampled over the last decades by several research teams in the Tien Shan and Karakorum mountains of western central Asia. Ring-width chronologies were developed on a site-by-site basis, using a detrending technique designed to retain low-frequency climate variations. Site chronologies were grouped according to their distance from the upper timberline in the Tien Shan (~3,400 m a.s.l.) and Karakorum (~4,000 m), and low- and high-elevation composite chronologies combining data from both mountain systems developed. Comparison of these elevational subsets revealed significant coherence (r = 0.72) over the 1438–1995 common period, which is inconsistent with the concept of differing environmental signals captured in tree-ring data along elevational gradients. It is hypothesized that the uniform growth behavior in central Asian juniper trees has been forced by solar radiation variations controlled via cloud cover changes, but verification of this assumption requires further fieldwork. The high-elevation composite chronology was further compared with existing temperature reconstructions from the Karakorum and Tien Shan, and long-term trend differences discussed. We concluded that the extent of warmth during medieval times cannot be precisely estimated based on ring-width data currently available.
description: Purpose of Collection: 
# Dendroclimatology
# 
# Cores and cross-sections are stored at: 
# WSL
#  NOAA Template Raw Measurements file added 2019-04-08.
DOI: 10.5517/cc60br8
title: CCDC 179079: Experimental Crystal Structure Determination

description: Related Article: I.Katsuki, Y.Motoda, Y.Sunatsuki, N.Matsumoto, T.Nakashima, M.Kojima|2002|J.Am.Chem.Soc.|124|629|doi:10.1021/ja0123960
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc60bs9
title: CCDC 179080: Experimental Crystal Structure Determination

description: Related Article: I.Katsuki, Y.Motoda, Y.Sunatsuki, N.Matsumoto, T.Nakashima, M.Kojima|2002|J.Am.Chem.Soc.|124|629|doi:10.1021/ja0123960
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25921/cesb-4169
title: NOAA/WDS Paleoclimatology - Belukha Glacier, Siberian Altai 750 Year Major Ions Data

description: Emissions from forests represent an important source of gaseous precursors of aerosols that can significantly alter the regional radiation balance. Long-term records of biogenic emissions are available for Northern America and the Amazon Basin, whereas the historical development of emissions from Siberian forests, comprising about 20% of the world’s forested area, is unknown so far. Here we investigate ice core ammonium and formate records for the last 750 years, representing biogenic emissions from boreal Siberian forests in the pre-industrial era. Biogenic emissions were found to be closely related to changes in temperature following variations in solar activity. In addition, anthropogenic emissions have caused a strong increase of the ammonium concentrations and a drop of the formate concentrations in the last 60 years.
description: 10-year averages of the major ion concentrations from the 2001 Belukha 
ice core, Siberian Altai. Dating uncertainties are <3 years (AD 1815-2000), 
<5 years (AD 1400-1815), and <10 years (AD 1250-1400).

Belukha ice core, Siberian Altai: 
49°48'26"N, 86°34'43"E, elevation 4062 m a.s.l., 139 m long
DOI: 10.5517/cc60btb
title: CCDC 179081: Experimental Crystal Structure Determination

description: Related Article: I.Katsuki, Y.Motoda, Y.Sunatsuki, N.Matsumoto, T.Nakashima, M.Kojima|2002|J.Am.Chem.Soc.|124|629|doi:10.1021/ja0123960
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc60bvc
title: CCDC 179082: Experimental Crystal Structure Determination

description: Related Article: I.Katsuki, Y.Motoda, Y.Sunatsuki, N.Matsumoto, T.Nakashima, M.Kojima|2002|J.Am.Chem.Soc.|124|629|doi:10.1021/ja0123960
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.64xhnc
title: Occurrence Download

description: A dataset containing 307425197 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Country is United States of America",
 "Year 2009-2019"
 ]
}

 The dataset includes 307425197 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006190-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eiguwm
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006848-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ad4xk
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Isabelia virginalis Barb.Rodr."
 ]
}

 The dataset includes 119 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009504-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ugoffm
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001641-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9cbeo
title: Occurrence Download

description: A dataset containing 2594 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Thamnophis marcianus (Baird & Girard, 1853)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2594 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006085-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g3p3hf
title: Occurrence Download

description: A dataset containing 236 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Photinia ×fraseri Dress",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 236 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019561-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/2499
title: GenAI-Bench
DOI: 10.48597/gc2q-73yp
title: Measurement of VOC (volatile organic compounds) at Zürich-Kaserne

description: Measurement of VOC (volatile organic compounds) at Zürich-Kaserne
DOI: 10.15468/dl.h27dyw
title: Occurrence Download

description: A dataset containing 1695851164 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1695851164 records from 24447 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022004-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjr4ws
title: Occurrence Download

description: A dataset containing 3319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spicara maena (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Material sample)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 3319 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004861-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/39e4f52039e5c498f7390259a4aa714e
title: Above and below ground phenology for the Niwot Ridge sensor node array, 2021 - 2022.

description: The below-ground growing season often extends beyond the above-ground growing season in tundra ecosystems. However, we do not yet know where and when this occurs and whether these phenological asynchronies are driven by variation in local vegetation communities or by spatial variation in microclimate. We deployed root in-growth cores in 4 locations in Niwot Ridge’s sensor node array as part of a multi-site study of above- and below-ground tundra phenology.
DOI: 10.15468/dl.6rrynf
title: Occurrence Download

description: A dataset containing 1180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nidorella aegyptiaca (L.) J.C.Manning & Goldblatt",
 "Continent is Africa"
 ]
}

 The dataset includes 1180 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004860-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15150785
title: Test Data for "Behavioral Safety Assessment towards Large-scale Deployment of Autonomous Vehicles"
DOI: 10.5281/zenodo.15150786
title: Test Data for "Behavioral Safety Assessment towards Large-scale Deployment of Autonomous Vehicles"
DOI: 10.15468/dl.zzmcfh
title: Occurrence Download

description: A dataset containing 3535 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-145.32906 -47.59611,25.32906 -47.59611,25.32906 20.59611,-145.32906 20.59611,-145.32906 -47.59611))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Didelphis albiventris Lund, 1840"
 ]
}

 The dataset includes 3535 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004862-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2kg6kz
title: Occurrence Download

description: A dataset containing 238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Shortia uniflora (Maxim.) Maxim.",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2010",
 "HasCoordinate is true"
 ]
}

 The dataset includes 238 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006464-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10466852
title: Multitask ISC data & code

description: Note

Here we provide preprocessed data and analysis code used in "Cortical representational geometry of diverse tasks reveals subject-specific and subject-invariant cognitive structures".

fMRI data were normalized into the standard space (MNI152NLin6Asym) and resampled to the surface template (fsaverage5). 

The analysis code requires Python version 3.8.8, Nilearn version 0.8.1, and Scikit-learn version 0.24.1.

If you have any questions, please send an email to nakai.tomoya [at] neuro.mimoza.jp. 

 

Usage

Encoding model training and testing

VertexRidge_SaveWeight_Multi.pyVertexRidge_Prediction_Multi.pyVisualizeRSM_WholeCortex.py

Identification analysis

VertexRidge_SaveWeight_Multi_SplitHalf.pySubIdentify.py

Inter-subject correlation analysis (task-type model)

Vertex_Relation_ISC_RSM.pyVertex_WeightISC_Multi.pyVertex_WeightRSM_Multi.pyRidgelinePlot_RSM-WeightISC_Multi.py

Multidimensional scaling

CalcDissimilarity.pyCalcMDS.rShowMDS.py

Principal component analysis

WeightPCA.pyVisualizeRSM-Network.py

Inter-subject correlation analysis (model-free)

Vertex_ISC_Multi.pyScatterPlot_ISC-WeightISC-RSM.py

Analysis using other latent features

VertexRidge_SaveWeight_Lang.pyVertexRidge_SaveWeight_Visual.pyVertexRidge_Prediction_Lang.pyVertexRidge_Prediction_Visual.pyVertex_WeightISC_Lang.pyVertex_WeightISC_Visual.pyVertex_WeightRSM_Lang.pyVertex_WeightRSM_Visual.pyRidgelinePlot_RSM-WeightISC_Lang.pyRidgelinePlot_RSM-WeightISC_Visual.pyRidgelinePlot_RSM-WeightISC_DiffFeatures.py
DOI: 10.25574/27199
title: Chandra X-ray Observatory ObsId 27199

description: A detailed view of the rare and colossal 800kpc sloshing cold front in the outskirts of Abell 399
DOI: 10.15468/dl.96652s
title: Occurrence Download

description: A dataset containing 400 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Living Specimen)",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Alloteuthis subulata",
 "Year 2000-2010"
 ]
}

 The dataset includes 400 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062005-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5e5b94
title: Occurrence Download

description: A dataset containing 3726 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trichodactylidae"
 ]
}

 The dataset includes 3726 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062004-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8utqt6
title: Occurrence Download

description: A dataset containing 1116 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bromelia balansae Mez"
 ]
}

 The dataset includes 1116 records from 119 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111622-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112028752
title: Cuneiform Tablet 1913.14.1514, Spurlock 1913.14.1514

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1514; CDLI P421366 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/1) Medium Gray (N 5.25/ 22.1% R) ❧ [Physical Object Note:] 7.5 x 4.7 x 2.8 cm (93 g)
DOI: 10.25582/data.2023-06.2820994/2370937
title: Data for EMSL Project 50356 from June 2023
DOI: 10.15468/dl.7adxer
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Forsteronia mollis Rusby"
 ]
}

 The dataset includes 34 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0218791-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.