cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.pv332/1
title: Georeferenced locality database

description: This file contains accurate point locality data for the taxa used in the study. Collection records with locality descriptions were obtained from various herbaria in South Africa (BOL, NBG, PRE) or from individual authors (e.g. G Galley).
DOI: 10.5061/dryad.rs610/1
title: Growth in seawater

description: Rate of increase of salt-selected lines, the ancestors, wild-type, and marine strain when grown in seawater. Data associated with Figure 2.
DOI: 10.5061/dryad.rs610/2
title: Ancestor to evolved comparison

description: Rate of increase of ancestors and salt-selected lines in a range of different salt concentrations. Data associated with Figure 3.
DOI: 10.5061/dryad.st6h9/14
title: T53A Y83A and deltaC in WT

description: Zipped folder contains Multichannel TIFFs. Explanation of files included as .txt file in Zipped Folder
DOI: 10.5061/dryad.st6h9/15
title: Traces for mEJC Quantification

description: Zipped folder contains .ABF Files. Explanation of files included as .txt file in Zipped Folder
DOI: 10.5061/dryad.st6h9/16
title: Traces for EJC Quantification

description: Zipped folder contains .ABF Files. Explanation of files included as .txt file in Zipped Folder
DOI: 10.5061/dryad.st6h9/17
title: Traces for Facilitation Index Quantification

description: Zipped folder contains .ABF Files. Explanation of files included as .txt file in Zipped Folder
DOI: 10.5061/dryad.tq6q5/1
title: Phytoplankton species biovolumes and nutrient concentrations

description: Raw data originated from a laboratory microcosm experiment using phytoplankton. Biovolumes from each species and the total biovolume per sample are being provided. Further information include the nutrient concentrations measured. Dispersal rates and disturbance levels (pulses) are also provided. Units are provided in parenthesis.
DOI: 10.5061/dryad.v51t0/1
title: Predicted Energy Intake Rate (PEIR)

description: Prey burying depth per month and year, energy and density per m2, the predicted a (exp.a; area of discovery) and predicted handling time (Th) and the intake rate (PEIR).
DOI: 10.5061/dryad.v51t0/2
title: Mean bill length of bar-tailed godwits (Limosa lapponica)

description: Mean bill length of bar-tailed godwits (Limosa lapponica) captured and/or resighted in the Dutch Wadden Sea and the Wash (UK).
DOI: 10.5061/dryad.082v2/1
title: Engesser et al. Dryad

description: Files include data and values used to generate figures
DOI: 10.5061/dryad.1j3t3/10
title: Inferior colliculus data file 1 (file 1 out of 5)

description: These Matlab MAT files (5 in total) contain multiunit activity electrophysiological data recorded from the mouse inferior colliculus. The data were collected using silicon electrode arrays (with recording sites arranged in 8 shanks with 8 sites per shank) from a sample of 5 animals. There is one file for each animal and the name of each file represents the date the experiment was performed. Each file contains the “data” structured array whose size depends on the number of electrode penetrations performed in each experiment (at least five per animal). For further information contact Dr. Jose A. Garcia Lazaro (jose.garcia-lazaro@ucl.ac.uk).
DOI: 10.5061/dryad.1j3t3/11
title: Inferior colliculus data file 2 (file 2 out of 5)
DOI: 10.5061/dryad.1j3t3/12
title: Inferior colliculus data file 3 (file 3 out of 5)
DOI: 10.5061/dryad.1j3t3/13
title: Inferior colliculus data file 4 (file 4 out of 5)
DOI: 10.5061/dryad.1j3t3/14
title: Inferior colliculus data file 5 (5 out of 5)
DOI: 10.5061/dryad.1j3t3/16
title: Cochlear nucleus data file 8 (file 8 out of 8)
DOI: 10.5061/dryad.2s361/1
title: Data - Remold etal Seasonal Diffs in Household PUG and PFG Distributions

description: Raw data describing sampled sites and strains recovered
DOI: 10.5061/dryad.2s361/2
title: Genbank Accession Nos - Remold etal Seasonal Diffs in Household PUG and PFG Distributions

description: Genbank Accession Numbers associated with each Pseudomonas strain (SRP)
DOI: 10.5061/dryad.473b6/3
title: Gonzalez et al 2 reviewsupplementary materialsJOH-2014-154review2
DOI: 10.5061/dryad.47v40/2
title: tree_nex

description: These are trees generated from different data sets.Names were refered as corresponding data sets
DOI: 10.5061/dryad.47v40/6
title: data_nex_new

description: These data sets were generated from genomic and transcriptomic data of jawed vertebrate. The compressed file contains data sets generated by different filtering approach,including data filtered by data completeness,alignment quality, gene informative, evolutionary rate,resolution of gene and specific data sets designed for neoaves,eutheria,teleostei questions.
DOI: 10.5061/dryad.47v40/7
title: python_scripts

description: Custom python_scripts used in the analysis, including mutual best hit analysis, pairwise_p_distance calculator, gene_average_bootstrap_value calculator, parse_gene_tree_topology. All scripts call module of Biopython. Please install Biopython before use.
DOI: 10.5061/dryad.547rp/1
title: veysey powell and babbitt_data_buffers and amphibians

description: See ReadMe for explanation of variable names.
DOI: 10.5061/dryad.67225/1
title: HNHR_monthly_weather

description: Monthly rainfall and temperature data for Hastings Reservation (the study site), 1939 - 2013.
DOI: 10.5061/dryad.67225/2
title: Hastings_mean_acorn_crop

description: Mean acorn crop data for Hastings Reservation (the study site), between 1980 and 2012. Data are the mean number of acorns counted per 30-s sample across all oak trees sampled (N = 250). Data are both the raw number of acorns counted and the mean log-transformed (ln[x+1]) number of acorns counted. Acorns are counted in the fall of year x, and thus correspond to the acorn woodpecker breeding season of year x+1.
DOI: 10.5061/dryad.67225/3
title: AcornWoodpeckerReproData

description: Raw data for acorn woodpecker group composition and reproductive success (total number of young fledged in the spring breeding season), 1972 - 2013, by territory (group).
DOI: 10.5061/dryad.6hq65/1
title: Raw data

description: Page 1 contains the raw estimates of viral genomes concentrations from the qPCR, the computed malthusian parameters and relative fitness, means, variances, SEM and t-tests for differences with wildtype genome (00000).  Page 2 contains the analyses of global epistasis. Page 3 the analyses of the type of global epistasis. Page 4 the analyses of local epistasis. Page 5 the analysis of the type of local epistasis.
DOI: 10.5061/dryad.74b7h.2
title: Data from: Phylogeography and support vector machine classification of colour variation in panther chameleons
DOI: 10.5061/dryad.8nc27/1
title: Alignment of Cardioglossa 16S sequences

description: Multiple alignment of mitochondrial DNA 16S sequences used for pairwise divergence calculations.
DOI: 10.5061/dryad.90kj2/1
title: Raw Data Schlichting et al
DOI: 10.5061/dryad.9nj6s/1
title: Long-tailed tit feeding rates

description: Observations of provisioning rates (visits/hour) with focal and social partner identities and time-varying covariates.
DOI: 10.5061/dryad.c418b/2
title: Bioclim data of NEC

description: 19 bioclimatic variables of northeast China (NEC) with a resolution of 10'
DOI: 10.5061/dryad.c418b/3
title: Bioclim data of the QTP

description: 19 bioclimatic variables of the Qinghai-Tibetan Plateau (QTP) with a resolution of 10'
DOI: 10.5061/dryad.fc054/1
title: data for figure 2ab, table 2 and 3
DOI: 10.5061/dryad.fd24j/1
title: Genomes & recombination maps for zebra finch and long-tailed finch
DOI: 10.5061/dryad.gr487/14
title: RANDSTATICPASGEN45_P4
DOI: 10.5061/dryad.gr487/15
title: RANDSTATICPASGEN45_P8
DOI: 10.5061/dryad.gr487/16
title: RANDSTATICPASGEN45_P7
DOI: 10.5061/dryad.gr487/17
title: RANDSTATICPASGEN45_P6
DOI: 10.5061/dryad.gr487/18
title: RANDSTATICPASGEN45_P5
DOI: 10.5061/dryad.gr487/19
title: RANDSTATICPASGEN45_P3
DOI: 10.5061/dryad.gr487/20
title: RANDSTATICPASGEN45_P2
DOI: 10.5061/dryad.gr487/21
title: RANDSTATICPASGEN45_P1
DOI: 10.5061/dryad.gr487/22
title: READ_ME
DOI: 10.5061/dryad.jh2fp/10
title: Mantel test

description: Distance data used in mantel tests
DOI: 10.5061/dryad.jh2fp/11
title: Raw genomic data (Allie's Valley)

description: Raw genomic RadSeq data from individuals in the Allie's Valley population. This zip archive contains 8 gzip compressed fastq files.
DOI: 10.5061/dryad.jh2fp/12
title: Raw genomic data (Anchorage)

description: Raw genomic RadSeq data from individuals in the Anchorage population. This zip archive contains 6 gzip compressed fastq files.
DOI: 10.5061/dryad.jh2fp/13
title: Raw genomic data (Crescent Creek)

description: Raw genomic RadSeq data from individuals in the Crescent Creek population. This zip archive contains 7 gzip compressed fastq files.
DOI: 10.5061/dryad.jh2fp/14
title: Raw genomic data (Denali Hwy)

description: Raw genomic RadSeq data from individuals in the Denali Highway population. This zip archive contains 6 gzip compressed fastq files.
DOI: 10.5061/dryad.jh2fp/15
title: Raw genomic data (Eagle Summit)

description: Raw genomic RadSeq data from individuals in the Eagle Summit population. This zip archive contains 6 gzip compressed fastq files.
DOI: 10.5061/dryad.jh2fp/8
title: Climate data used in ENM (0 kya)

description: Trimmed climate data (current climates) used to generate niche models in Maxent.
DOI: 10.5061/dryad.jh2fp/9
title: Climate data used in ENM (21 kya)

description: Trimmed climate data from the Last Glacial Maximum (21 kya) used to generate niche models in Maxent.
DOI: 10.5061/dryad.m90r2/1
title: Community composition_with PCAs

description: Family and genus level presence and abundance data for the spider inquiline communities that occur in A. studiosus webs
DOI: 10.5061/dryad.mb1t9/1
title: Morphometric data of trilobite Duodingia duodingensis

description: This dataset belongs to the paper intitled 'Early postembryonic to mature ontogeny of the cheiruroideid trilobite Duodingia duodingensis from the lower Cambrian (Series 2) of southern China'. It has been included in the desciptions of ontogeny of the trilobite Duodingia duodingensis. Bivariate scatter diagrams of cranidia in Figure 6 is also based on those morphometric data.
DOI: 10.5061/dryad.p14jc/1
title: DATASET_Patricelli_Barbero et al

description: Raw data of bioassays, chemical analyses, gene expression and other experiments described in the ms: "Plant defenses against ants provide a pathway to social parasitism in butterflies"
DOI: 10.5061/dryad.pm162/1
title: D. serrata mating trial CHC data

description: This file contains the gas chromatography data for the epicuticular hydrocarbons (i.e. CHCs) of Drosophila subquinaria ‘mixed stock’ males that were used in binomial choice mating trials with females from each of eight geographic populations. Each row is the data for one male. The columns indicate the day of the mating trial (Day), the replicate vial number (Vial), whether the male was chosen (i.e. mated) or not by the female during the trial (Chosen) and denoted as 1 vs. 0 respectively, the population of the female used in the trial (Pop), and whether this population is sympatric or allopatric to Drosophila recens (Type), with inland allopatric and coastal allopatric regions further denoted. Line denotes the isofemale line from which the female derived. See Table 1 of the paper for a description of the population abbreviations. GC data has had outliers removed but is untransformed and therefore represents the raw, integrated values. Peaks are numbered as described in Curtis et al. 2013. Epicuticular compounds of Drosophila subquinaria and D. recens: Identification, quantification, and their role in female mate choice. Journal of Chemical Ecology: 39: 579–590.
DOI: 10.5061/dryad.q3d2m/1
title: GeneMapper data of 560 individuals of Saxifraga granulata collected along two rivers in Belgium

description: Raw GeneMapper data with four extra columns with information about the samples (i.e. Sort, River, Population, Individual). Without the first four columns data can be easily read via the r function read.GeneMapper() from the r-package 'polysat'.
DOI: 10.5061/dryad.rs610/3
title: Effect of acclimation on ancestors

description: Rate of increase of ancestors in a range of salt concentrations after acclimation with or without salt, and when grown in the light or in the dark. Data associated with Figure 4.
DOI: 10.5061/dryad.rs610/4
title: Effect of acclimation on evolved lines

description: Rate of increase of salt-selected lines in a range of salt concentrations after acclimation with or without salt. Data associated with Figure 5.
DOI: 10.5061/dryad.rs610/5
title: Crossing trial

description: Rate of increase of salt-selected parents, ancestral parent, F1, and F2 in a range of different salt concentrations after acclimation with or without salt. Data associated with Figure 6.
DOI: 10.5061/dryad.s270f/1
title: Morphological wing measurements of Drosophila melanogaster

description: Data from selection experiment on allometry. See README file
DOI: 10.5061/dryad.s270f/2
title: Morphological wing measurements of 111 drosophilid species

description: Content of datafile (repeated from README.txt):Species: species identifier hopefully self explanatory, normally [first letter in genus]_[species or subspecies, abbreviated], see table S6 in Bolstad et al. 2015 for the scientific name; ID: individual fly ID in the form of the picture name;Date: the date the image of the fly was taken (day_month_year); Sex: the sex of each fly, where F codes for female and M codes for male; WingSize: the size of each fly's wing in log(mm) (square root of area on the natural logarithmic scale); L2Length: length of vein L2 in log(mm), where log is the natural logarithm
DOI: 10.5061/dryad.s7867/1
title: Data used in Manning et al 2015 J.Appl Ecol

description: This file contains both the model fitting and validation datasets used in the paper 'Simple measures of climate, soil properties and plant traits predict national scale grassland soil carbon stocks' by Manning et al 2015. For details of units etc see the explanation tab. For methods details see the paper itself and the supplementary materials. For enquiries contact Peter Manning. peter.manning@senckenberg.de
DOI: 10.5061/dryad.sd6nj/1
title: CombinedData

description: Collection of mainland species records from the Natural History Museum of Los Angeles County and the Smithsonian, U.S. Natural History Museum.
DOI: 10.5061/dryad.tm361/1
title: Dryad_diani_stats

description: Summarizes data from flight cage experiments for each individual bat (A-L) of the two species (Anoura caudifer or Anoura geoffroyi) for the two background types (Simple vs. Complex) and two scent types (Banana vs. Sulfur).  "Trial1" and "Trial2" columns give the number of visits to the scented flower (out of the twenty total visits recorded; that is, 20 less this number is the number of visits to the unscented flower with the 'training-flower' shape).
DOI: 10.5061/dryad.v23r2/1
title: Amac_ILMO_Dryad

description: Excel spreadsheet with haplotype and genotype scores for 489 field-collected Ambystoma maculatum embryos across one mitochondrial and seven microsatellite loci. Sample ID's, population names, and names of loci are given as column headings.
DOI: 10.5061/dryad.vt46n/1
title: U.S. wild pig species distribution model data

description: This is the final dataset used to derive the wild pig distribution model for the contiguous United States presented in the accompanying publication, along with predictive model output values. Please see the ReadMe file for further details.
DOI: 10.5061/dryad.0506g/1
title: Source code package for simulation software dfuse

description: Contains C source code files: main_dfuse.c, func_dfuse.c, head_dfuse.h, COPYING, Makefile; documentation file: notes.pdf; folder with example input files: inputfiles
DOI: 10.5061/dryad.0506g/2
title: Example commands to run simulations for each Figure in the article

description: Column 1, Figure number; column 2, Figure subpart; column 3, architecture of selection; column 4, example command to run simulation to generate data presented in that Figure
DOI: 10.5061/dryad.0506g/3
title: All input files used for simulations presented in the article

description: Files to specify deme settings: demefile; epistatic selection: epifile; single-locus selection: selfile; environmental settings: envifile
DOI: 10.5061/dryad.0506g/4
title: Scripts to recreate simulation results shown in Figures 2-4 in the article

description: Perl and R scripts to run simulation software and to create Figures with results
DOI: 10.5061/dryad.18n7k/1
title: Multistate CMR input

description: Excel file with multistate capture histories for male and female group of individuals in non-mesic.burnt (B) and mesic/unburnt (B) zones of the Cambarville study site. Columns can be concatenated to create MARK input file. Second worksheet includes dates of trapping sessions and temporal rainfall covriates.
DOI: 10.5061/dryad.18n7k/2
title: Genotypes

description: Multilocus microsatellite genotypes of Trichosurus cunninghami in GenAlEx format. Individuals are grouped by trapping session, such that each individual appears mutliple times in the file. XY (UTM) coordinates are provided after the genotypes, followed by further information on trapping region and year of sampling, to allow for further data sorting.
DOI: 10.5061/dryad.18n7k/3
title: Data for GLMM of new captures

description: Capture records of individuals used for GLMM analysis of spatial and temporal variation in capture patterns and individual characteristics
DOI: 10.5061/dryad.18n7k/4
title: Data for analysis of female reproductive output
DOI: 10.5061/dryad.1th60/1
title: Wood warbler data 2010-2012 daily nest survival rate

description: data per nest per day
DOI: 10.5061/dryad.1th60/2
title: wood warbler data 2010-2012 clutch size
DOI: 10.5061/dryad.1th60/3
title: wood warbler data 2010-2012 fledglings
DOI: 10.5061/dryad.23tp6/1
title: R code for nested, two-way ANOVAs

description: R code for nested, two-way ANOVAs (example for Fig. 1A)
DOI: 10.5061/dryad.28dj1/1
title: Soil and vegetation variables
DOI: 10.5061/dryad.2bm50/1
title: Raw data for Silver ant paper_June 9 2015

description: Raw data used to plot figures in the main text and supplementary section of the paper on Saharan silver ants
DOI: 10.5061/dryad.2pf38/1
title: O-avatar_holotype_I2E_3-0um_PNG
DOI: 10.5061/dryad.3ng5c/1
title: sand flea data

description: Data on sand fleas and substrate
DOI: 10.5061/dryad.3v4hn/1
title: FehraltorfStercorariaFieldSizesAll1993-2009-DRYAD

description: These are the raw (individual) hind tibia lengths for females and males in Fehraltorf, Switzerland, over ca. 20 years.
DOI: 10.5061/dryad.3v4hn/2
title: FehraltorfFieldMeanSizesAppendixTableS1-DRYAD

description: These are the analyzed field size MEANS stemming from Fehraltorf, Switzerland, 1993-2009
DOI: 10.5061/dryad.3v4hn/3
title: FehratorfLabCGMeanSizesAppendixTableS2-DRYAD

description: These are the MEAN laboratory sizes analyzed for the Fehraltorf population between 1993 and 2009. Some of these means were taken from the papers, for others the raw data are available from the author.
DOI: 10.5061/dryad.4647d/1
title: SCevolution2015

description: Includes raw data in .txt files (collected in the lab), R scripts used to create the figures and do statistics, and the figures themselves.
DOI: 10.5061/dryad.47v40/8
title: Supplementary File Archives

description: These are supplementary tables and figures related to the paper.
DOI: 10.5061/dryad.4gg88/1
title: House et al. ConditionData-Survival&Development&MorphologicalData

description: Sheet 1 includes survival (0 = died, 1 = survived), development time and body size. Diet is a number from 1 - 24, Plate number is a number from 1 - 96. The %P and %C is the percentage P and C in that diet. Sheet 2 includes the morphometric data - body size, mean eye area, mandible size & genital size. As before, Diet is a number from 1 - 24, Plate number is a number from 1 - 71. The %P and %C is the percentage P and C in that diet. Please refer to the manuscript for information explaining why some diets aren't represented in the morphological data and the 'plate' effect.
DOI: 10.5061/dryad.4p6v6/1
title: Full_data_set_Bonal_RSOS_2015

description: The Excel file contains 5 data Sheets. 
  
The first one includes the information of the number of males and females collected in those traps in which at least one individual was captured. It also includes the date of the beginning of late summer rain and the total rainfall recorded all over the weevil emergence period for each year. 
The second sheet includes the number of males and females collected along the weevil emergence period pooling together the data of the five study years.
The third shows the mean emergence date of the males and females collected at each trap and the date of the beginning of late summer rainfall each study year.
The fourth and the fifth include the mean elytra length of the females and males collected at each trap along the weevil emergence period pooling together the data of the five study years. The sixth includes the rainfall probability along the weevil emergence period pooling together the date from all the temporal series available at the meteorological station. 

In all cases the sampling unit is the trap. The study period was divided in 12 weeks: Week 1 (August 4th to 10th ) to Week 12 (October 20th to 26th). Sex is coded as 1 males and 2 females. For the dates Julian dates are used, being January 1st the Day 1. Rainfall was recorded in litres/m2.
DOI: 10.5061/dryad.59t58/1
title: Data file Trachops experiment 1 and 2

description: This data file contains the data from experiment 1 (sheets 1, 3, 5) and experiment 2 (sheets 2, 4, 6). Sheets 1 and 2 contain all raw data. Sheets 3 and 4 contain attack angles averaged per individual bat, as a response to the respective treatments. Sheets 5 and 6 contain the mean resultant vector lengths of six approach angles for each individual bat, as a response to the respective treatments.
DOI: 10.5061/dryad.640qp/1
title: Seed set in the studied Trollius europaeus populations

description: Data on the number of produced seeds from Trollius europaeus populations. Number of ovules (column ovules_sum) and developing seeds (column seed_sum) were counted in five carpels per fruit.
DOI: 10.5061/dryad.640qp/2
title: Seed mass and germination in the four Trollius europaeus populations

description: Mass measured on 25 seeds per fruit (column mass; in mg). Germination is measured as the number of germinating seeds form 25 initial ones, after two weeks (column germination). Seeds used for germination tests were the same as for weight measurement. For details on the germination trial please refer to the publication.
DOI: 10.5061/dryad.74b7h.1
title: Data from: Phylogeography and support vector machine classification of colour variation in panther chameleons
DOI: 10.5061/dryad.74b7h.2/1.2
title: Data and code for "Phylogeography and Support Vector Machine Classification of Colour Variation in Panther Chameleons"

description: The image data and program code (written in Python 2.7) for clustering and SVM classification, as well as the input files for the species delimitation analyses.
DOI: 10.5061/dryad.8hr60/1
title: Description of data and code for the plots
DOI: 10.5061/dryad.91j93/1
title: Vicsek Simulation 1

description: Raw data for Vicsek simulation #1. Parameter values are given in manuscript. Columns are time, x position, y position, x velocity, y velocity.
DOI: 10.5061/dryad.91j93/2
title: Vicsek Simulation 2

description: Raw data for Vicsek simulation #2. Parameter values are given in manuscript. Columns are time, x position, y position, x velocity, y velocity.
DOI: 10.5061/dryad.91j93/3
title: Vicsek Simulation 3

description: Raw data for Vicsek simulation #3. Parameter values are given in manuscript. Columns are time, x position, y position, x velocity, y velocity.
DOI: 10.5061/dryad.91j93/4
title: D'Orsogna Simulation

description: Raw data for D'Orsogna simulation. Parameter values are given in manuscript. Columns are time, x position, y position, x velocity, y velocity.