cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4121/4464ab86-9214-49b3-a808-10ca655385a6.v2
title: Data underlying the publication: MOSAIC: a highly efficient, one-step recombineering approach to plasmid editing and diversification

description: Data underlying the pre-print: Van den Brink, M., Althuis, T.Y., Danelon, C. and Claassens, N.J. (2024) MOSAIC: a highly efficient, one-step recombineering approach to plasmid editing and diversification. bioRxiv, 10.1101/2024.03.22.586135.<br>This dataset contains data collected during experiments as part of Marijn van den Brink's and Timotheus Althuis' PhD projects. The raw data consists of Nanopore sequencing data. Nanopore sequencing was performed by Plasmidsaurus (Oregon, US). The FASTQ files were then mapped to reference sequences, resulting in .bam/.bai files. These were further analyzed using an in-house developed R script. All data processing and analysis steps are described in detail in the methods section of the publication.<br>The data is grouped in folders based on the figures in the publication. The folder name specifies the figure number and contains a short description of the data. Each folder contains raw data (FASTQ) and processed data. The processed data consists of (i) the mapped reads (file format: .bam and .bai), (ii) the analysis results of the mapped reads (file format: .csv and .xlsx), (iii) the graphs plotting the results (file format: .pzfx), and (iv) the R scripts used to produce the results incl. the required .xlsx files.<br>To analyze your own data using our R script, go to "General Nanopore data analysis scripts &gt; MOSAIC-library-analysis-script.R". This R script contains information on how to adapt the script to your own data.
DOI: 10.4121/4464ab86-9214-49b3-a808-10ca655385a6.v3
title: Data underlying the publication: MOSAIC: a highly efficient, one-step recombineering approach to plasmid editing and diversification

description: Data underlying the pre-print: Van den Brink, M., Althuis, T.Y., Danelon, C. and Claassens, N.J. (2024) MOSAIC: a highly efficient, one-step recombineering approach to plasmid editing and diversification. bioRxiv, 10.1101/2024.03.22.586135.<br>This dataset contains data collected during experiments as part of Marijn van den Brink's and Timotheus Althuis' PhD projects. The raw data consists of Nanopore sequencing data. Nanopore sequencing was performed by Plasmidsaurus (Oregon, US). The FASTQ files were then mapped to reference sequences, resulting in .bam/.bai files. These were further analyzed using an in-house developed R script. All data processing and analysis steps are described in detail in the methods section of the publication.<br>The data is grouped in folders based on the figures in the publication. The folder name specifies the figure number and contains a short description of the data. Each folder contains raw data (FASTQ) and processed data. The processed data consists of (i) the mapped reads (file format: .bam and .bai), (ii) the analysis results of the mapped reads (file format: .csv and .xlsx), (iii) the graphs plotting the results (file format: .pzfx), and (iv) the R scripts used to produce the results incl. the required .xlsx or .csv files.<br>To analyze your own data using our R script, go to "General Nanopore data analysis scripts &gt; MOSAIC-library-analysis-script.R". This R script contains information on how to adapt the script to your own data.
DOI: 10.4121/4464ab86-9214-49b3-a808-10ca655385a6.v4
title: Data underlying the publication: MOSAIC: a highly efficient, one-step recombineering approach to plasmid editing and diversification

description: Data underlying the pre-print: Van den Brink, M., Althuis, T.Y., Danelon, C. and Claassens, N.J. (2024) MOSAIC: a highly efficient, one-step recombineering approach to plasmid editing and diversification. bioRxiv, 10.1101/2024.03.22.586135.<br>This dataset contains data collected during experiments as part of Marijn van den Brink's and Timotheus Althuis' PhD projects. The raw data consists of Nanopore sequencing data. Nanopore sequencing was performed by Plasmidsaurus (Oregon, US). The FASTQ files were then mapped to reference sequences, resulting in .bam/.bai files. These were further analyzed using an in-house developed R script. All data processing and analysis steps are described in detail in the methods section of the publication.<br>The data is grouped in folders based on the figures in the publication. The folder name specifies the figure number and contains a short description of the data. Each folder contains raw data (FASTQ) and processed data. The processed data consists of (i) the mapped reads (file format: .bam and .bai), (ii) the analysis results of the mapped reads (file format: .csv and .xlsx), (iii) the graphs plotting the results (file format: .pzfx), and (iv) the R scripts used to produce the results incl. the required .xlsx or .csv files.<br>To analyze your own data using our R script, go to "General Nanopore data analysis scripts &gt; MOSAIC-library-analysis-script.R". This R script contains information on how to adapt the script to your own data.
DOI: 10.14278/rodare.3553
title: Data publication for "Feasibility of Na-Zn batteries for grid-scale energy storage: insights from in situ studies"

description: This dataset contains unprocessed results from the X-ray radiography imaging of high temperature molten salt Na-Zn battery.

The folders are structured as follows:

- 01 to 03 correspond to radiography results,

- 04 corresponds to comparison of long-term cycling of two different batteries.

01 to 03 has subfolder structure as follows:

- 01 has the raw files in 16bit tiff format,

- 02 has unprocessed png files with fixed contrast and overlay of cycling data for each time step,

- 03 is an mp4 video of png files made with ffmpeg,

- 04 is the recorded cycling data.

The raw data has the Date and time as title.

There is 167 second offset between radiographs and electrochemical data (one has to add the offset time to join both data sets).

Cycling data has been exported as .txt from EC-Lab V11.61 with following variables:

*time/s* *Ewe/V* *I/mA* *(Q-Q0)/mA.h* *cycle number* *mode* *ox/red*

This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 963599.
DOI: 10.14278/rodare.3554
title: Data publication for "Feasibility of Na-Zn batteries for grid-scale energy storage: insights from in situ studies"

description: This dataset contains unprocessed results from the X-ray radiography imaging of high temperature molten salt Na-Zn battery.

The folders are structured as follows:

- 01 to 03 correspond to radiography results,

- 04 corresponds to comparison of long-term cycling of two different batteries.

01 to 03 has subfolder structure as follows:

- 01 has the raw files in 16bit tiff format,

- 02 has unprocessed png files with fixed contrast and overlay of cycling data for each time step,

- 03 is an mp4 video of png files made with ffmpeg,

- 04 is the recorded cycling data.

The raw data has the Date and time as title.

There is 167 second offset between radiographs and electrochemical data (one has to add the offset time to join both data sets).

Cycling data has been exported as .txt from EC-Lab V11.61 with following variables:

*time/s* *Ewe/V* *I/mA* *(Q-Q0)/mA.h* *cycle number* *mode* *ox/red*

This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 963599.
DOI: 10.25403/upresearchdata.28323731
title: Professional noticing of learners' mathematical thinking as a feature of lesson study

description: My research was focused on how mathematics teachers employed professional noticing when they offered lessons within the lesson study context. The researcher looked at how they identify incidents that elicit learners' mathematical thinking and understanding, how they interpret and reason about such incidents, and how they respond to those incidents. The goal was to see if their responses helped learners overcome the mathematical confusions they have in order to learn the mathematical concepts.
DOI: 10.25403/upresearchdata.28323731.v1
title: Professional noticing of learners' mathematical thinking as a feature of lesson study

description: My research was focused on how mathematics teachers employed professional noticing when they offered lessons within the lesson study context. The researcher looked at how they identify incidents that elicit learners' mathematical thinking and understanding, how they interpret and reason about such incidents, and how they respond to those incidents. The goal was to see if their responses helped learners overcome the mathematical confusions they have in order to learn the mathematical concepts.
DOI: 10.15468/dl.rz27rd
title: Occurrence Download

description: A dataset listing the 68 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vigna unguiculata (L.) Walp."
 ]
}

 The dataset's 68 records were derived from 358 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009738-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.svhvkp
title: Occurrence Download

description: A dataset containing 983 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((121.64153 25.05992,121.63931 25.05582,121.64178 25.04897,121.65118 25.04881,121.65356 25.05454,121.65199 25.06171,121.64702 25.06163,121.64153 25.05992))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 983 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009755-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28253936
title: 数据和代码

description: &lt;智能转型如何赋能制造企业的创新质量提升：资源编排视角&gt;数据和代码
DOI: 10.6084/m9.figshare.28253936.v2
title: 数据和代码

description: &lt;智能转型如何赋能制造企业的创新质量提升：资源编排视角&gt;数据和代码
DOI: 10.6084/m9.figshare.28253936.v1
title: 数据和代码

description: &lt;智能转型如何赋能制造企业的创新质量提升：资源编排视角&gt;数据和代码
DOI: 10.15468/dl.6fs2k2
title: Occurrence Download

description: A dataset containing 6841567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Pandion haliaetus (Linnaeus, 1758)"
 ]
}

 The dataset includes 6841567 records from 1807 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009741-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/4tnknx
title: A new species of Lobelia (Campanulaceae: Lobelioideae) from the Sierra Madre Oriental, Mexico

description: This dataset contains the digitized treatments in Plazi based on the original journal article Pérez-Pérez, Miguel A., Ayers, Tina J., Amith, Jonathan D. (2022): A new species of Lobelia (Campanulaceae: Lobelioideae) from the Sierra Madre Oriental, Mexico. Phytotaxa 568 (1): 1-7, DOI: 10.11646/phytotaxa.568.1.1, URL: http://dx.doi.org/10.11646/phytotaxa.568.1.1AbstractLobelia alanae sp. nov. from Puebla and Veracruz, Mexico, is described from four known populations in tropical deciduous forests from 153 to 700 m elevation. This new species is compared to the closely related Lobelia porphyrea, a species known only from the type collection in the state of Hidalgo. Lobelia alanae can be separated from L. porphyrea by its height, hypanthium, calyx lobes and fruit. Based on the strongly reticulate-foveolate seed coats, L. alanae is hypothesized to be a new member of section Lobelia, previously comprising 22 species nearly endemic to the eastern U.S.
DOI: 10.15468/zeszps
title: First record of Acanthocystis nichollsi (Centroplasthelida: Panacanthocystida) from freshwater in Japan

description: This dataset contains the digitized treatments in Plazi based on the original journal article Gaponova, Liudmyla, Suzaki, Toshinobu, Ishida, Hideki, Kolosiuk, Andrii (2025): First record of Acanthocystis nichollsi (Centroplasthelida: Panacanthocystida) from freshwater in Japan. Zootaxa 5692 (3): 597-600, DOI: 10.11646/zootaxa.5692.3.12, URL: https://doi.org/10.11646/zootaxa.5692.3.12
DOI: 10.15468/xbu6wm
title: Occurrence of Anthalona neotropica Sousa, Elmoor-Loureiro and Debastiani-Júnior, 2015 (Crustacea: Cladocera: Chydoridae) in Bahia State, Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Jesus, Sheila Bonfim de, Elmoor-Loureiro, Lourdes M. A. (2021): Occurrence of Anthalona neotropica Sousa, Elmoor-Loureiro and Debastiani-Júnior, 2015 (Crustacea: Cladocera: Chydoridae) in Bahia State, Brazil. Nauplius (e 2021010) 29: 1-5, DOI: 10.1590/2358-2936e2021010, URL: http://dx.doi.org/10.1590/2358-2936e2021010ABSTRACTAlthough the cladoceran Anthalona neotropica Sousa, Elmoor-Loureiro and Debastiani-Júnior, 2015 has a wide geographic range in Brazil, until now, it has only been reported in a few localities. The present study reports the occurrence of this species in the estuaries of the Jequitinhonha River and Una River, representing the first records of An. neotropica in Bahia State, Brazil.
DOI: 10.15468/y8ev7k
title: Rohdea medogensis (Asparagaceae), a new species from southeast Tibet, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Feng, Hui Zhe, Ren, Yong Zhu Ci, He, Xuan, Han, Qing Xiang, Lin, Qin Wen (2022): Rohdea medogensis (Asparagaceae), a new species from southeast Tibet, China. Phytotaxa 542 (1): 90-94, DOI: 10.11646/phytotaxa.542.1.8, URL: http://dx.doi.org/10.11646/phytotaxa.542.1.8AbstractRohdea medogensis, a new species from Tibet, China, is described and illustrated. This species is similar to R. verruculosa in sharing characters of the perianth with ringed, fleshy appendage in throat and lobes abaxially with verruculose, but differs mainly by bracts 3 per flower, with several sterile bracts apically; outer bract ca. 4.5 cm long, ca. 3 mm broad; perianth globular; lobes shorter ca. 2.0 mm long, margin lacerated, apical subacut; the top of annular appendage margin lacerated, 2 mm above the top of perianth tube; stigma bend, without lobed; style conspicuous; ovary globose or subglobose, askew; berry and seed ellipsoid, askew.
DOI: 10.15468/tmuhrc
title: First record of Eremias kakari Masroor et al., 2020 (Squamata: Lacertidae) for Afghanistan

description: This dataset contains the digitized treatments in Plazi based on the original journal article Jablonski, Daniel, Masroor, Rafaqat (2021): First record of Eremias kakari Masroor et al., 2020 (Squamata: Lacertidae) for Afghanistan. Bonn zoological Bulletin 70 (1): 63-65, DOI: 10.20363/BZB-2021.70.1.063, URL: http://dx.doi.org/10.20363/bzb-2021.70.1.063Abstract. The presented paper reports on the first record of Eremias kakari Masroor, Khisroon, Khan, Jablonski, 2020 for Afghanistan based on morphological data obtained from one specimen stored for 49 years in the Zoological Research Museum Alexander Koenig, Bonn, Germany. Up to now, the species was known only from the type locality in Pakistani Balochistan.
DOI: 10.15468/4wwenp
title: One more and one less: a new species of large bromelicolous lizard (Gymnophthalmidae: Anadia) from the Andean cloud forests of northwestern Colombia and the phylogenetic status of Anadia antioquensis

description: This dataset contains the digitized treatments in Plazi based on the original journal article Amézquita, Adolfo, Daza, Juan Manuel, Contreras, Leidy Alejandra Barragán, Orejuela, Catalina, Barrientos, Lucas Santiago, Mazariegos, Luis A. (2022): One more and one less: a new species of large bromelicolous lizard (Gymnophthalmidae: Anadia) from the Andean cloud forests of northwestern Colombia and the phylogenetic status of Anadia antioquensis. Zootaxa 5150 (2): 217-238, DOI: 10.11646/zootaxa.5150.2.3AbstractThe genus Anadia (family Gymnophthalmidae) consists of 19 species. It has remained almost taxonomically stable for decades, scarcely observed, in addition to being one of the less sampled gymnophthalmid genera with respect to molecular phylogenies. New Anadia species are discovered at a relatively low pace, and few specimens are found in the field, probably due to the arboreal habits of many low and mid elevation species. We describe here a new species of Anadia from the cloud forests of northwestern Colombia: the new species is easily diagnosed by the combination of shape and imbrication of dorsal scales, very large body size, the largest within its group, and large and non-overlapping number of longitudinal scale rows around midbody. We also tested the phylogenetic position of the recently described and geographically close A. antioquensis. A phylogenetic analysis based on four genomic regions recovered the new species as sister to A. buenaventura, whereas A. antioquensis was reassigned to the genus Riama. The new species is currently known from only three specimens, collected throughout eight years within less than 5 ha of the Mesenia-Paramillo Nature Reserve. Although its apparent rarity may be due to secretive habits, the species is provisionally declared vulnerable, while new information is available. To stimulate further research on this genus, we also compiled and present here the comparable information on the distribution and morphology of Anadia species. Altogether, the results stress the urge for a new review of the genus with the help of molecular data.
DOI: 10.15468/dl.mk44mb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"7019135","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024769-241024112534372/datasets/export for details.
DOI: 10.15468/dl.6av8kr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"7019136","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024770-241024112534372/datasets/export for details.
DOI: 10.15468/dl.svzx6e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"7019137","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024771-241024112534372/datasets/export for details.
DOI: 10.15468/dl.4nwa89
title: Occurrence Download

description: A dataset containing 1806 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Haloragis micrantha (Thunb.) R.Br."
 ]
}

 The dataset includes 1806 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024772-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.npge59
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-90.08869 21.08594,-89.66953 21.15265,-89.35816 21.21775,-89.34154 21.29334,-89.387 21.36823,-89.69659 21.39695,-90.13974 21.23162,-90.08692 21.09769,-90.08869 21.08594))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is one of (28eb1a3f-1c15-4a95-931a-4af90ecb574d, e2e717bf-551a-4917-bdc9-4fa0f342c530, 0c6d40e3-5d96-4a2d-9342-b02833aaa766)",
 "TaxonKey is Phoenicopterus ruber Linnaeus, 1758",
 "Year 2010-2024"
 ]
}

 The dataset's 1 records were derived from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024742-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kt5nyh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"7019140","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024774-241024112534372/datasets/export for details.