cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3958324
title: ds-uct-007: Asphalt Concrete: X-Ray micro-CT of an asphalt concrete sample.

description: <strong>Summary</strong>:<br> .X-Ray micro-computed tomography (micro-CT) of an asphalt concrete sample, including both raw projection data and the final reconstructions, for one single resolution (voxel size of 7 μm).<br> .The 3D image was generated with an X-Ray micro-CT Scanner version Xradia Versa 510 from Zeiss performed by A Pereira at the UFF micro-CT Facility.<br> .Image data segmented with four different segmentation techniques: DL (Deep Learning), ML (Machine Learning), TH (Thresholding) and WS (Watershed).<br> .For use of these data, please remember to cite the DOI of the Zenodo repository and relevant papers.<br> <strong>Details</strong>:<br> .Tomo - Voxel size: 7 μm; Sample-source: 31 mm; Sample-detector: 274.25 mm; Optical magnification: 0.4X; Filter: LE#6; Beam energy: 100 kV; Power: 9 W; Exposure time: 4.0 sec; Projections: 1600. <strong>Contents</strong>:<br> ._info_ds-uct-007.txt<br> .ds-uct-007_asphalt_concrete_07um_16bits.zip<br> .ds-uct-007_asphalt_concrete_07um_1600p.txrm<br> .ds-uct-007_asphalt_concrete_07um_1600p_Drift.txrm<br> .ds-uct-007_asphalt_concrete_07um_1600p_recon.txm<br> .ds-uct-007_asphalt_concrete_07um_DL.zip<br> .ds-uct-007_asphalt_concrete_07um_ML.zip<br> .ds-uct-007_asphalt_concrete_07um_TH32.zip<br> .ds-uct-007_asphalt_concrete_07um_WS.zip
DOI: 10.25430/researchdata.cab.unipd.it.00000362
title: X-ray_images_plastic_shrinkage

description: Time-laps images of plastic shrinkage in alkali-activated calcined clays
DOI: 10.5517/ccdc.csd.cc254fd5
title: CCDC 2000256: Experimental Crystal Structure Determination

description: Related Article: Adharsh Raghavan, Fang Yuan, Tong Ren|2020|Inorg.Chem.|59|8663|doi:10.1021/acs.inorgchem.0c01755
DOI: 10.5517/ccdc.csd.cc254ff6
title: CCDC 2000257: Experimental Crystal Structure Determination

description: Related Article: Adharsh Raghavan, Fang Yuan, Tong Ren|2020|Inorg.Chem.|59|8663|doi:10.1021/acs.inorgchem.0c01755
DOI: 10.5517/ccdc.csd.cc256xcp
title: CCDC 2002642: Experimental Crystal Structure Determination

description: Related Article: Niels V. Heise, Michael Kahnt, Christoph Wagner, Ahmed Al-Harrasi, René Csuk|2020|J.Mol.Struct.|1220|128718|doi:10.1016/j.molstruc.2020.128718
DOI: 10.5517/ccdc.csd.cc1zlq2c
title: CCDC 1835233: Experimental Crystal Structure Determination

description: Related Article: Alicia Dominguez-Martin, Simona Galli, José A. Dobado, Noelia Santamaría-Díaz, Antonio Pérez-Romero, Miguel A. Galindo|2020|Inorg.Chem.|59|9325|doi:10.1021/acs.inorgchem.0c01210
DOI: 10.5517/ccdc.csd.cc1zlq1b
title: CCDC 1835232: Experimental Crystal Structure Determination

description: Related Article: Alicia Dominguez-Martin, Simona Galli, José A. Dobado, Noelia Santamaría-Díaz, Antonio Pérez-Romero, Miguel A. Galindo|2020|Inorg.Chem.|59|9325|doi:10.1021/acs.inorgchem.0c01210
DOI: 10.5517/ccdc.csd.cc1zlq4f
title: CCDC 1835235: Experimental Crystal Structure Determination

description: Related Article: Alicia Dominguez-Martin, Simona Galli, José A. Dobado, Noelia Santamaría-Díaz, Antonio Pérez-Romero, Miguel A. Galindo|2020|Inorg.Chem.|59|9325|doi:10.1021/acs.inorgchem.0c01210
DOI: 10.5517/ccdc.csd.cc25mfdn
title: CCDC 2014671: Experimental Crystal Structure Determination

description: Related Article: K.U. Narvekar, B.R. Srinivasan|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1260|doi:10.1107/S2056989020009287
DOI: 10.5517/ccdc.csd.cc25mffp
title: CCDC 2014672: Experimental Crystal Structure Determination

description: Related Article: K.U. Narvekar, B.R. Srinivasan|2020|Acta Crystallogr.,Sect.E:Cryst.Commun.|76|1260|doi:10.1107/S2056989020009287
DOI: 10.5281/zenodo.3959138
title: Adaptive introgression from maize has facilitated the establishment of teosinte as a noxious weed in Europe

description: This is the total genotyoping matrix we used for the analyses.<br> The first line of the file contains the identifiers of the samples and each subsequent line the genotype at each SNP The first column contains the identifier of the SNPs. Genotype data for the 70 French teosintes was combined with published and available data for the following material: 40 accessions of Spanish teosintes (1), 314 accessions of parviglumis (2, 3), 332 accessions of mexicana (2, 3), 94 maize landraces from Meso- and Central-America (4) and 155 maize inbred lines from North-America and Europe (5) Trtikova M, Lohn A, Binimelis R, Chapela I, Oehen B, Zemp N, Widmer A, Hilbeck A (2017) Teosinte in Europe – searching for the origin of a novel weed. Scientific Reports 7, 1560. DOI: https://doi.org/10.1038/s41598-017-01478-w Aguirre-Liguori JA, Tenaillon MI, Vásquez-Lobo A, Gaut BS, Jaramillo-Correa JP, Montes-Hernandez S, Souza V, Eguiarte LE (2017) Connecting genomic patterns of local adaptation and niche suitability in teosintes. Molecular Ecology 26, 4226-4240. DOI: https://doi.org/10.1111/mec.14203 Pyhäjärvi T, Hufford MB, Mezmouk S, Ross-Ibarra J (2013) Complex patterns of local adaptation in teosinte. Genome Biology and Evolution 5, 1594–1609. DOI: https://doi.org/10.1093/gbe/evt109 Takuno S, Ralph P, Swarts K, Elshire RJ, Glaubitz JC, Buckler ES, Hufford MB, Ross-Ibarra J (2015) Independent molecular basis of convergent highland adaptation in maize. Genetics 200, 1297–1312. DOI: https://doi.org/10.1534/genetics.115.17832 Unterseer S, Pophaly SD, Peis R, Westermeier P, Mayer M, Seidel MA, Haberer G, Mayer KFX, Ordas B, Pausch H, Tellier A, Bauer , Schön CC (2016) A comprehensive study of the genomic differentiation between temperate Dent and Flint maize. Genome Biology 17, 137. DOI: https://doi.org/10.1186/s13059-016-1009-x
DOI: 10.5281/zenodo.3959137
title: Adaptive introgression from maize has facilitated the establishment of teosinte as a noxious weed in Europe

description: This is the total genotyoping matrix we used for the analyses.<br> The first line of the file contains the identifiers of the samples and each subsequent line the genotype at each SNP The first column contains the identifier of the SNPs. Genotype data for the 70 French teosintes was combined with published and available data for the following material: 40 accessions of Spanish teosintes (1), 314 accessions of parviglumis (2, 3), 332 accessions of mexicana (2, 3), 94 maize landraces from Meso- and Central-America (4) and 155 maize inbred lines from North-America and Europe (5) Trtikova M, Lohn A, Binimelis R, Chapela I, Oehen B, Zemp N, Widmer A, Hilbeck A (2017) Teosinte in Europe – searching for the origin of a novel weed. Scientific Reports 7, 1560. DOI: https://doi.org/10.1038/s41598-017-01478-w Aguirre-Liguori JA, Tenaillon MI, Vásquez-Lobo A, Gaut BS, Jaramillo-Correa JP, Montes-Hernandez S, Souza V, Eguiarte LE (2017) Connecting genomic patterns of local adaptation and niche suitability in teosintes. Molecular Ecology 26, 4226-4240. DOI: https://doi.org/10.1111/mec.14203 Pyhäjärvi T, Hufford MB, Mezmouk S, Ross-Ibarra J (2013) Complex patterns of local adaptation in teosinte. Genome Biology and Evolution 5, 1594–1609. DOI: https://doi.org/10.1093/gbe/evt109 Takuno S, Ralph P, Swarts K, Elshire RJ, Glaubitz JC, Buckler ES, Hufford MB, Ross-Ibarra J (2015) Independent molecular basis of convergent highland adaptation in maize. Genetics 200, 1297–1312. DOI: https://doi.org/10.1534/genetics.115.17832 Unterseer S, Pophaly SD, Peis R, Westermeier P, Mayer M, Seidel MA, Haberer G, Mayer KFX, Ordas B, Pausch H, Tellier A, Bauer , Schön CC (2016) A comprehensive study of the genomic differentiation between temperate Dent and Flint maize. Genome Biology 17, 137. DOI: https://doi.org/10.1186/s13059-016-1009-x
DOI: 10.5281/zenodo.3959177
title: European Case Study SDM data

description: Baseline data and Impacts of Policy Cards for the for the System Dynamics Model of the European Case Study in Sim4Nexus.
DOI: 10.5281/zenodo.3959176
title: European Case Study SDM data

description: Baseline data and Impacts of Policy Cards for the for the System Dynamics Model of the European Case Study in Sim4Nexus.
DOI: 10.25387/g3.12624767
title: Supplemental material for Rafikova, Hu, and Kubiseski, 2020

description: Supplementary Figures. Figure S1 is Fold Induction of gst-4 mRNA caused by brap-2(ok1492) mutation in wild type, sem-4(n1378) and sem-4(n1971) animals. Figure S1 is ChIP-seq tracks of SEM-4 binding sites to some phase II detoxification genes. Table S1 is list of C. elegans strains used in this study.<br>
DOI: 10.25387/g3.12624767.v1
title: Supplemental material for Rafikova, Hu, and Kubiseski, 2020

description: Supplementary Figures. Figure S1 is Fold Induction of gst-4 mRNA caused by brap-2(ok1492) mutation in wild type, sem-4(n1378) and sem-4(n1971) animals. Figure S1 is ChIP-seq tracks of SEM-4 binding sites to some phase II detoxification genes. Table S1 is list of C. elegans strains used in this study.<br>
DOI: 10.5281/zenodo.3959214
title: The reliability of acceptability judgments across languages. Glossa: a journal of general linguistics, 3(1), 100.

description: Results from The reliability of acceptability judgments across languages. <em>Glossa: a journal of general linguistics, 3</em>(1), 100. DOI: http://doi.org/10.5334/gjgl.528 "Group" is the number of the contrast (referred to in the paper as J4, J5, etc in the paper). In the "member" column, 1 refers to starred and 0 to unstarred.
DOI: 10.5281/zenodo.3959213
title: The reliability of acceptability judgments across languages. Glossa: a journal of general linguistics, 3(1), 100.

description: Results from The reliability of acceptability judgments across languages. <em>Glossa: a journal of general linguistics, 3</em>(1), 100. DOI: http://doi.org/10.5334/gjgl.528 "Group" is the number of the contrast (referred to in the paper as J4, J5, etc in the paper). In the "member" column, 1 refers to starred and 0 to unstarred.
DOI: 10.25934/00000277.1
title: IPD datapackage for study 'A Randomized, Double-Blind Study to Compare the Durability of Glucose Lowering and Preservation of Pancreatic Beta-Cell Function of Rosiglitazone Monotherapy Compared to Metformin or Glyburide/Glibenclamide in Patients With Drug-Naive, Recently Diagnosed Type 2 Diabetes Mellitus' and research request: 'Request 4113 - Updated data package for NCT00279045'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00005962
title: Request 4113 - Updated data package for NCT00279045

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5281/zenodo.3946512
title: Host genotype and stable differences in algal symbiont communities explain patterns of thermal stress response of Montipora capitata following thermal pre-exposure and across multiple bleaching events

description: Data and script supporting "Stable symbiont communities and host genotype underpin complex differences in thermal stress response in <em>Montipora capitata</em>". "Data_MASTER.xlsx" contains raw water temperature, PAM fluorometry F<sub>v</sub>/F<sub>M</sub>, and qPCR data, as well as fragment identification information. "data_processing.R" contains the R script used to clean up, analyze, and visualize the data. <strong>Abstract:</strong> As sea surface temperatures increase worldwide due to climate change, coral bleaching events are becoming more frequent and severe, resulting in reef degradation. Leveraging the inherent ability of reef-building corals to acclimatize to thermal stress via pre-exposure to protective temperature treatments may become an important tool in improving the resilience of coral reefs to rapid environmental change. We investigated whether historical bleaching phenotype, coral host genotype, and exposure to protective temperature treatments would affect the response of the Hawaiian coral <em>Montipora capitata</em> to natural thermal stress. Fragments were collected from colonies that demonstrated different bleaching responses during the 2014-2015 event in Kāne‘ohe Bay (O‘ahu, Hawai‘i) and exposed to four different artificial temperature pre-treatments (and a control at ambient temperature). After recovery, fragments experienced a natural thermal stress event either in laboratory conditions or their native reef environment. Response to thermal stress was quantified by measuring changes in the algal symbionts’ photochemical efficiency, community composition, and relative density. Historical bleaching phenotype was reflected in stable differences in symbiont community composition, with historically bleached corals containing only <em>Cladocopium</em> symbionts and historically non-bleached corals having mixed symbiont communities dominated by <em>Durusdinium</em>. Mixed-community corals lost more <em>Cladocopium</em> than <em>Cladocopium</em>-only corals during the natural thermal stress event, and preferentially recovered with <em>Durusdinium</em>. Laboratory pre-treatments exposed corals to more thermal stress than anticipated, causing photochemical damage that varied significantly by genotype. While none of the treatments had a protective effect, temperature variation during treatments had a significant detrimental effect on photochemical efficiency during the thermal stress event. These results show that acclimatization potential is affected by fine-scale differences in temperature regime, host genotype, and relatively stable differences in symbiont community composition that underpin historical bleaching phenotypes in <em>M. capitata</em>.
DOI: 10.5281/zenodo.3946511
title: Host genotype and stable differences in algal symbiont communities explain patterns of thermal stress response of Montipora capitata following thermal pre-exposure and across multiple bleaching events

description: Data and script supporting "Stable symbiont communities and host genotype underpin complex differences in thermal stress response in <em>Montipora capitata</em>". "Data_MASTER.xlsx" contains raw water temperature, PAM fluorometry F<sub>v</sub>/F<sub>M</sub>, and qPCR data, as well as fragment identification information. "data_processing.R" contains the R script used to clean up, analyze, and visualize the data. <strong>Abstract:</strong> As sea surface temperatures increase worldwide due to climate change, coral bleaching events are becoming more frequent and severe, resulting in reef degradation. Leveraging the inherent ability of reef-building corals to acclimatize to thermal stress via pre-exposure to protective temperature treatments may become an important tool in improving the resilience of coral reefs to rapid environmental change. We investigated whether historical bleaching phenotype, coral host genotype, and exposure to protective temperature treatments would affect the response of the Hawaiian coral <em>Montipora capitata</em> to natural thermal stress. Fragments were collected from colonies that demonstrated different bleaching responses during the 2014-2015 event in Kāne‘ohe Bay (O‘ahu, Hawai‘i) and exposed to four different artificial temperature pre-treatments (and a control at ambient temperature). After recovery, fragments experienced a natural thermal stress event either in laboratory conditions or their native reef environment. Response to thermal stress was quantified by measuring changes in the algal symbionts’ photochemical efficiency, community composition, and relative density. Historical bleaching phenotype was reflected in stable differences in symbiont community composition, with historically bleached corals containing only <em>Cladocopium</em> symbionts and historically non-bleached corals having mixed symbiont communities dominated by <em>Durusdinium</em>. Mixed-community corals lost more <em>Cladocopium</em> than <em>Cladocopium</em>-only corals during the natural thermal stress event, and preferentially recovered with <em>Durusdinium</em>. Laboratory pre-treatments exposed corals to more thermal stress than anticipated, causing photochemical damage that varied significantly by genotype. While none of the treatments had a protective effect, temperature variation during treatments had a significant detrimental effect on photochemical efficiency during the thermal stress event. These results show that acclimatization potential is affected by fine-scale differences in temperature regime, host genotype, and relatively stable differences in symbiont community composition that underpin historical bleaching phenotypes in <em>M. capitata</em>.
DOI: 10.5517/ccdc.csd.cc1pbtpj
title: CCDC 1559538: Experimental Crystal Structure Determination

description: Related Article: Ji Fa Zhang|2017|CSD Communication|||
description: Related Article: Shuai Huang, Ji-Fa Zhang, Lin Chen, Feng Gao, Xian-Li Zhou|2020|Phytochemistry|178|112459|doi:10.1016/j.phytochem.2020.112459
DOI: 10.5517/ccdc.csd.cc2426bs
title: CCDC 1968324: Experimental Crystal Structure Determination

description: Related Article: Laura A. Essex, Alex McSkimming, Niklas B. Thompson, Margaret L. Kelty, Ethan A. Hill, W. Hill Harman|2020|Organometallics|39|2545|doi:10.1021/acs.organomet.0c00340
DOI: 10.5517/ccdc.csd.cc2426ct
title: CCDC 1968325: Experimental Crystal Structure Determination

description: Related Article: Laura A. Essex, Alex McSkimming, Niklas B. Thompson, Margaret L. Kelty, Ethan A. Hill, W. Hill Harman|2020|Organometallics|39|2545|doi:10.1021/acs.organomet.0c00340
DOI: 10.5517/ccdc.csd.cc2426fw
title: CCDC 1968327: Experimental Crystal Structure Determination

description: Related Article: Laura A. Essex, Alex McSkimming, Niklas B. Thompson, Margaret L. Kelty, Ethan A. Hill, W. Hill Harman|2020|Organometallics|39|2545|doi:10.1021/acs.organomet.0c00340
DOI: 10.5281/zenodo.3959240
title: Dataset for "Information Correspondence between Types of Documentation for APIs"

description: This online appendix contains the coding guide and the data used in the paper <em>Information Correspondence between Types of Documentation for APIs</em> accepted for publication in the <em>Empirical Software Engineering</em> (EMSE) journal. The tutorial data was retrieved in October 2018. It contains the following files: 1. <strong>CodingGuide.pdf</strong>: the coding guide to classify a sentence as <em>API Information</em> or <em>Supporting Text</em>. 2. <strong>annotated_sampled_sentences.csv</strong>: the set of 332 sampled sentences and two columns of corresponding annotations – one by the first author of this work and the second by an external annotator. This data was used to calculate the agreement score reported in the paper. 3. <strong>&lt;language&gt;-&lt;topic&gt;.csv</strong>: the data set of annotated sentences in the tutorial on &lt;topic&gt; in &lt;language&gt;. For example Python-REGEX.csv is the file containing sentences from the Python tutorial on regular expressions. This file contains the preprocessed sentences from the tutorial, their source files, and their annotation of sentence correspondence with reference documentation. For licensing reasons, we are unable to upload the original API reference documentation and tutorials, however these are available on request.
DOI: 10.5281/zenodo.3959239
title: Dataset for "Information Correspondence between Types of Documentation for APIs"

description: This online appendix contains the coding guide and the data used in the paper <em>Information Correspondence between Types of Documentation for APIs</em> accepted for publication in the <em>Empirical Software Engineering</em> (EMSE) journal. The tutorial data was retrieved in October 2018. It contains the following files: 1. <strong>CodingGuide.pdf</strong>: the coding guide to classify a sentence as <em>API Information</em> or <em>Supporting Text</em>. 2. <strong>annotated_sampled_sentences.csv</strong>: the set of 332 sampled sentences and two columns of corresponding annotations – one by the first author of this work and the second by an external annotator. This data was used to calculate the agreement score reported in the paper. 3. <strong>&lt;language&gt;-&lt;topic&gt;.csv</strong>: the data set of annotated sentences in the tutorial on &lt;topic&gt; in &lt;language&gt;. For example Python-REGEX.csv is the file containing sentences from the Python tutorial on regular expressions. This file contains the preprocessed sentences from the tutorial, their source files, and their annotation of sentence correspondence with reference documentation. For licensing reasons, we are unable to upload the original API reference documentation and tutorials, however these are available on request.
DOI: 10.5281/zenodo.3959275
title: Acute kidney mechanical damage

description: Relation between external workload and acute kidney mechanical damage
DOI: 10.5281/zenodo.3959274
title: Acute kidney mechanical damage

description: Relation between external workload and acute kidney mechanical damage
DOI: 10.25387/g3.12605408
title: Supplemental Material for Chung et al., 2020

description: Table S5: Functional term enrichment analyses for each Wolbachia study<br>
DOI: 10.25387/g3.12605408.v1
title: Supplemental Material for Chung et al., 2020

description: Table S5: Functional term enrichment analyses for each Wolbachia study<br>
DOI: 10.25500/edata.bham.00000510
title: Transcriptions and apparatus of Greek manuscripts of 2 Thessalonians