cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qut7t8
title: Occurrence Download

description: A dataset containing 50823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhododendron ponticum"
 ]
}

 The dataset includes 50823 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038653-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17627408
title: Supplementary Files
DOI: 10.5281/zenodo.17627407
title: Supplementary Files
DOI: 10.6092/unibo/amsacta/8517
title: Micro-CT Image Dataset of Environmentally-Friendly Materials Collected in the MICROENFRIM Project

description: This dataset contains the data produced within the project “Connecting Micromechanics and Microstructure of Environmentally-Friendly Insulation Materials” (MICROENFRIM), carried out at the DMEX laboratory of the Université de Pau et des Pays de l’Adour (UPPA). The research investigates the microstructure and mechanical response of environmentally friendly insulation materials based on cementitious matrices and bio-derived or recycled aggregates. The dataset comprises micro-CT scans of multiple specimens acquired in both unloaded conditions and during in-situ mechanical loading, as well as after specific aging protocols and across different material formulations. Both high- and low-resolution tomographic images are provided to enable detailed analyses of internal structure and damage phenomena in sustainable building materials.
DOI: 10.15468/dl.7su94z
title: Occurrence Download

description: A dataset containing 39966 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lindera benzoin"
 ]
}

 The dataset includes 39966 records from 273 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038697-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17628580
title: Diverifikasi produk olahan di pesisir muara gembong kabupaten bekasi

description: Diverifikasi produk olahan perikanan di pesisir muara gembong kabupaten bekasi
DOI: 10.5281/zenodo.17628581
title: Diverifikasi produk olahan di pesisir muara gembong kabupaten bekasi

description: Diverifikasi produk olahan perikanan di pesisir muara gembong kabupaten bekasi
DOI: 10.15468/dl.5wynht
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Catalogue of Life"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038699-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zfxxy8
title: Occurrence Download

description: A dataset containing 157 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is Thymus villosus lusitanicus"
 ]
}

 The dataset includes 157 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038700-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8vwzue
title: Occurrence Download

description: A dataset containing 392 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Taxus wallichiana mairei"
 ]
}

 The dataset includes 392 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038701-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wjmyfu
title: Occurrence Download

description: A dataset containing 93 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, , , , , , , , , , Phoebe macrophylla, , , , , , Phoebe macrophylla, , , , Phoebe macrophylla, , Persea macrophylla, , , , , , , , , , , , Machilus macrophylla, Phoebe rigida)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 93 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038702-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17628642
title: Experimental evidence linking honeybee stressor responses to climate-smart agricultural (CSA) practices and sustainability outcomes
DOI: 10.5281/zenodo.17628643
title: Experimental evidence linking honeybee stressor responses to climate-smart agricultural (CSA) practices and sustainability outcomes
DOI: 10.57755/qs7x-5g79
title: AT4 respiratory activity of food waste compost: raw OxiTop® data for 154 samples across temperature, aeration, and organic matter content variants

description: <p>This dataset contains raw data in CSV format obtained during the measurement of AT4 respiratory activity of composts produced from food waste, determined using the OxiTop® Control system (Weilheim, Germany). The measurement data were extracted from the memory of the controller, which is part of the OxiTop® measurement system. The dataset includes data for compost samples after 7 days of composting conducted at the laboratory scale at temperatures of 45, 60, and 70°C. Within each temperature variant, aeration conditions were differentiated by supplying oxygen to the composting bioreactors at a flow rate of 10 dm³ O₂/min for 0, 0.5, 1, or 1.5 minutes. Additionally, within these temperature and aeration variants, different levels of organic matter content were considered, expressed as the volumetric ratio of food waste to mineral gravelite: 0:1, 1:0, 1:1, and 1:2, respectively. The dataset comprises raw data for 154 compost samples.</p>
description: <p>A model food waste (FW) mixture (potatoes, rice, pasta, onions, apples, bananas, tomatoes, lettuce, bread, cheese, and ham) was composted. To adjust the organic matter content (OMC) within the bioreactors, the FW was mixed with a mineral bulking material, gravelite (G), at volumetric ratios of 1:0, 1:1, and 1:2 (FW:G). These mixtures corresponded to dry organic matter content values of approximately 95%, 40%, and 20%, respectively. In addition, a control variant containing gravelite only (ratio 0:1, representing 0% OMC) was also included in the study. </p><p>The composting experiment was carried out following the methodology described elsewhere (dataset doi: 10.57755/s1b5-cm63).</p><p>The respiratory activity was measured with the OxiTop Control system (Weilheim, Germany), following the methodology described by Binner et al. (doi: 10.1016/j.wasman.2012.05.024).</p><p>The total mass of compost material placed in each OxiTop® vessel ranged from 20 to 60 g, with an optimal target of 50–55 g whenever possible.</p>
DOI: 10.17026/ar/aocmej
title: Archeologisch bureauonderzoek Dijkverbetering Cuijk-Ravenstein, gemeenten Land van Cuijk, Maashorst en Oss
title: SWAR 2733

description: In opdracht van Waterschap Aa en Maas heeft Sweco Nederland B.V. een archeologisch bureauonderzoek uitgevoerd naar het dijktracé Cuijk - Ravenstein, gemeenten Land van Cuijk, Maashorst en Oss. De aanleiding voor dit onderzoek is de geplande dijkverbetering langs het tracé, waar verschillende grondroerende werkzaamheden mee gemoeid zijn.

De aardwetenschappelijke situatie in het plangebied is zeer divers. Het plangebied ligt in een gebied waar rivierterrassen aanwezig zijn in de ondergrond. Deze afzettingen kunnen plaatselijk relatief ondiep verwacht worden vanaf de Haven van Cuijk tot Overlangel. Door de verschuiving van de terrassenkruising begonnen de rivieren in dit gebied te accumuleren vanaf circa 3300 voor Chr. Vanaf deze periode komen er gestapelde stroomgordels voor. Binnen het plangebied betreffen dat de stroomgordels Haren (verland tijdens de Midden-Bronstijd circa 1.260 v. Chr. met als hoogste voorkomen van het beddingzand op +4,7 tot 4,1 m NAP), Huisseling-Demen (vanaf de Bronstijd en IJzertijd tot Romeinse tijd, met als hoogste voorkomen van het beddingzand op +6,1 tot +5,1 m NAP) en mogelijk een oudere stroomgordel met code 731 die nog niet goed te reconstrueren is, maar uit 4150-3690 voor Chr. (Midden-Neolithicum) dateert en in de ondergrond aanwezig is ten zuiden van Neerloon. Verder vormen zich meerdere fasen van oeverwallen langs de Maas, en zijn er afzettingen van de zijtak de Graafsche Raam en afzettingen van de Beerse Maas. Door deze lokale verschillen kunnen relatief oude afzettingen ondiep voorkomen, plaatselijk kunnen deze afzettingen zijn opgeruimd door latere rivieractiviteit en/of zijn afgedekt door dikke pakketten stroomgordelafzettingen, overstromingsmateriaal en uiterwaardenpakketten. Daarnaast zijn er rivierduinen mogelijk aanwezig in de ondergrond. Deze zijn ontstaan tijdens koude en droge perioden aan het einde van de laatste IJstijd. Na de bedijking in het gebied vanaf de Late Middeleeuwen heeft er nog sedimentatie plaatsgevonden van de Maas in de buitendijkse gebieden en tot circa 1942 van de Beerse Maas in de nu binnendijkse gebieden. Hierdoor kunnen oudere afzettingen zijn bedekt met uiterwaardenafzettingen of een overstromingsdek. Na het afsnijden van de Maas rond 1937 is het gebied rondom de Keent verder van de rivier af en Neerloon dichterbij de Maas komen te liggen.
DOI: 10.17026/ar/yxegjo
title: Archeologisch onderzoek Dijktracé Salmsteke - Schoonhoven, gemeente Lopik en Krimpenerwaard
title: Inventariserend onderzoek: verkennende boringen SWAR 2731

description: In opdracht van het Hoogheemraadschap De Stichtse Rijnlanden heeft Sweco Nederland B.V. een archeologisch inventariserend veldonderzoek (verkennende fase) uitgevoerd naar het dijktracé van Salmsteke tot Schoonhoven, gemeente Lopik en Schoonhoven. De aanleiding voor dit onderzoek is het plan om de Lekdijk langs de Lek bij Salmsteke - Schoonhoven te versterken en het gebied her in te richten. In het kader van de m.e.r. voor het project Sterke Lekdijk is reeds een bureauonderzoek uitgevoerd voor het tracé Salmsteke – Schoonhoven.
DOI: 10.15468/dd.p2zgaq
title: Dataset generated from Esri tool

description: Derived dataset generated by Esri geoprocessing tool using GBIF API
DOI: 10.15468/dl.nej2cr
title: Occurrence Download

description: A dataset containing 675984 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tetrastes bonasia, Tetrao urogallus, Caprimulgus europaeus, Columba oenas, Grus grus, Scolopax rusticola, Tringa ochropus, Ciconia nigra, Ardea cinerea, Pernis apivorus, Circaetus gallicus, Clanga pomarina, Hieraaetus pennatus, Aquila heliaca, Accipiter nisus, Accipiter gentilis, Milvus milvus, Milvus migrans, Haliaeetus albicilla, Buteo buteo, Aegolius funereus, Glaucidium passerinum, Strix aluco, Strix uralensis, Jynx torquilla, Picoides tridactylus, Dendrocoptes medius, Dryobates minor, Dendrocopos leucotos, Dryocopus martius, Picus canus, Oriolus oriolus, Garrulus glandarius, Nucifraga caryocatactes, Corvus frugilegus, Periparus ater, Lophophanes cristatus, Poecile palustris, Poecile montanus, Aegithalos caudatus, Phylloscopus sibillatrix, Phylloscopus bonelli, Phylloscopus trochilus, Phylloscopus collybita, Hippolais polyglotta, Hippolais icterina, Locustella fluviatilis, Sylvia borin, Regulus ignicapilla, Regulus regulus, Troglodytes troglodytes, Sitta europaea, Certhia familiaris, Certhia brachydactyla, Turdus philomelos, Turdus viscivorus, Turdus iliacus, Turdus pilaris, Turdus torquatus, Erithacus rubecula, Luscinia luscinia, Ficedula parva, Ficedula hypoleuca, Ficedula albicollis, Prunella modularis, Anthus trivialis, Coccothraustes coccothraustes, Pyrrhula pyrrhula, Loxia curvirostra, Carduelis citrinella, Spinus spinus, Phylloscopus humei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Austria)"
 ]
}

 The dataset includes 675984 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038679-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28366172
title: The effects of <i>Xanthium</i> species

description: Invasive plants introduced outside their native ranges by human activities are posing significant threats to biodiversity and ecosystem functions. Nevertheless, plants invasion driven changes in ‘biodiversity–ecosystem function’ are scantily described in relation to multifunctionality. Climate factor are often considered to influence plant invasions consequences. However, there exists paucity of empirical evidences on how invasive plants and their interactions with climatic variables like temperature affect multifunctionality. In this study, we designed a field experiment assessing the effects of invasive <i>Xanthium</i> on multifunctionality across temperature gradients in northwest China. Further, similar warming effects were assessed on congener indigenous species for comparison.
DOI: 10.6084/m9.figshare.28366172.v1
title: The effects of <i>Xanthium</i> species

description: Invasive plants introduced outside their native ranges by human activities are posing significant threats to biodiversity and ecosystem functions. Nevertheless, plants invasion driven changes in ‘biodiversity–ecosystem function’ are scantily described in relation to multifunctionality. Climate factor are often considered to influence plant invasions consequences. However, there exists paucity of empirical evidences on how invasive plants and their interactions with climatic variables like temperature affect multifunctionality. In this study, we designed a field experiment assessing the effects of invasive <i>Xanthium</i> on multifunctionality across temperature gradients in northwest China. Further, similar warming effects were assessed on congener indigenous species for comparison.
DOI: 10.6084/m9.figshare.28366172.v2
title: The effects of <i>Xanthium</i> species

description: Invasive plants introduced outside their native ranges by human activities are posing significant threats to biodiversity and ecosystem functions. Nevertheless, plants invasion driven changes in ‘biodiversity–ecosystem function’ are scantily described in relation to multifunctionality. Climate factor are often considered to influence plant invasions consequences. However, there exists paucity of empirical evidences on how invasive plants and their interactions with climatic variables like temperature affect multifunctionality. In this study, we designed a field experiment assessing the effects of invasive <i>Xanthium</i> on multifunctionality across temperature gradients in northwest China. Further, similar warming effects were assessed on congener indigenous species for comparison.
DOI: 10.3929/ethz-b-000717695
title: Dataset for "Sorting and Surging: 3D LiDAR and Pulse-Doppler Radar Analysis of a Natural Debris Flow"

description: Data and measurements for the 30 June 2022 debris flow at Illgraben (Switzerland), recorded at three monitoring stations (Gazoduc, CD27, CD29). For details, refer to the README.txt file.
DOI: 10.3929/ethz-c-000786925
title: Raw Data for "Sorting and Surging: 3D LiDAR and Pulse-Doppler Radar Analysis of a Natural Debris Flow"

description: LiDAR point clouds (.ply format, compressed) of the 30 June 2022 debris flow at Illgraben (Switzerland), recorded at three monitoring stations (Gazoduc, CD27, CD29). For details, refer to the readme.txt, (processed) data repository and original publication.
DOI: 10.15468/dl.tyfr7p
title: Occurrence Download

description: A dataset containing 7816585 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((86.14212 29.90794,86.1024 22.82581,93.10944 19.80084,100.00258 30.1622,86.14212 29.90794))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 7816585 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038662-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23708/ppppdl
title: OMERE Observatory - A long-term dataset on hydrology and suspended sediments in the Kamech catchment (1994-2023).

description: This dataset contains Rainfall, Evaporation, Discharge and Suspendend Sediment Concentration data over the period 1994-2023 from Kamech catchment, OMERE Observatory (Molenat et al., 2018, https://dx.doi.org/10.2136/vzj2018.04.0086). The OMERE long-term observation strategy intends to support integrative multidisciplinary research for elucidating the conditions that improve soil and water management and delivery of ecosystem services in a Mediterranean rainfed cultivated context. This dataset relates directly to the following OMERE scientific sub-objectives: (i) to better understand water flows, erosion, and their natural and anthropogenic factors in the short and long term; (ii) to analyze the cumulative effects of agriculture and land management on mass flows at different scales, from the plot to the watershed or landscape. Please refer to Hamdi et al. (submitted) when using the data: Hamdi et al (2025). A long-term dataset on hydrology and suspended sediments in the Kamech catchment from the OMERE Observatory. Submitted to Earth Surface Science Data
DOI: 10.34740/kaggle/dsv/13763553
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.chxscg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, , Phoebe nicobarica, , )",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038703-251025141854904/datasets/export for details.
DOI: 10.5281/zenodo.17607455
title: Wildlife
DOI: 10.5281/zenodo.17607456
title: Wildlife
DOI: 10.15468/dl.4wqvxu
title: Occurrence Download

description: A dataset containing 439 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Taxus wallichiana mairei"
 ]
}

 The dataset includes 439 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038704-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17453316
title: Bakta annotations for 1 991 NORM hybrid assemblies

description: Contains bakta annotations for 1 991 Escherichia coli hybrid assemblies used in a study into co-evolution between colibactin production and resistance.

Files

The archive `bakta-annotations-ecoli.tar` extracts to a folder `bakta-annotations-ecoli` with 1 991 folders each containing the gzipped output files from bakta for each assembly. Extracted size is the same as the upload size.

Accession numbers and other metadata for the assemblies are available in the `NORM-hybrid_metadata.tsv` file. Data related to colibactin production and resistance are available in a separate upload: doi: 10.5281/zenodo.17017465.

Methods

Data were obtained from two studies [1] and [2] and annotated with bakta v1.10.4 (GitHub: oschwengers/bakta, [3]) against full database v5.1 dated 2024-01-19 (doi: 10.5281/zenodo.10522951). Bakta was ran using the following command:```bakta --db $bakta_db --tmp-dir $tmpdir --min-contig-length 200 --prefix $basename --output $outdir --threads $threads $fasta```

Data source

Hybrid assembly files are available from the European Nucleotide Archive under project accessions PRJEB57633 and PRJEB45354. The list of assemblies included in this upload is included in the `NORM-hybrid_metadata.tsv` file.

References

Isolation, sequencing, and assembly are described in the following two studies:

[1] Gladstone et al. "Emergence and dissemination of antimicrobial resistance in Escherichia coli causing bloodstream infections in Norway in 2002–17: a nationwide, longitudinal, microbial population genomic study". The Lancet Microbe (2021). doi: 10.1016/S2666-5247(21)00031-8.

[2] Arredondo-Alonso et al. "Plasmid-driven strategies for clone success in Escherichia coli". Nature Communications (2025). doi: 10.1038/s41467-025-57940-1.

If you use these assemblies, you should also cite the publication describing Bakta:

[3] Schwengers et al. "Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification." Microbial genomics (2021). doi: 10.1099/mgen.0.000685.
DOI: 10.5281/zenodo.17453317
title: Bakta annotations for 1 991 NORM hybrid assemblies

description: Contains bakta annotations for 1 991 Escherichia coli hybrid assemblies used in a study into co-evolution between colibactin production and resistance.

Files

The archive `bakta-annotations-ecoli.tar` extracts to a folder `bakta-annotations-ecoli` with 1 991 folders each containing the gzipped output files from bakta for each assembly. Extracted size is the same as the upload size.

Accession numbers and other metadata for the assemblies are available in the `NORM-hybrid_metadata.tsv` file. Data related to colibactin production and resistance are available in a separate upload: doi: 10.5281/zenodo.17017465.

Methods

Data were obtained from two studies [1] and [2] and annotated with bakta v1.10.4 (GitHub: oschwengers/bakta, [3]) against full database v5.1 dated 2024-01-19 (doi: 10.5281/zenodo.10522951). Bakta was ran using the following command:```bakta --db $bakta_db --tmp-dir $tmpdir --min-contig-length 200 --prefix $basename --output $outdir --threads $threads $fasta```

Data source

Hybrid assembly files are available from the European Nucleotide Archive under project accessions PRJEB57633 and PRJEB45354. The list of assemblies included in this upload is included in the `NORM-hybrid_metadata.tsv` file.

References

Isolation, sequencing, and assembly are described in the following two studies:

[1] Gladstone et al. "Emergence and dissemination of antimicrobial resistance in Escherichia coli causing bloodstream infections in Norway in 2002–17: a nationwide, longitudinal, microbial population genomic study". The Lancet Microbe (2021). doi: 10.1016/S2666-5247(21)00031-8.

[2] Arredondo-Alonso et al. "Plasmid-driven strategies for clone success in Escherichia coli". Nature Communications (2025). doi: 10.1038/s41467-025-57940-1.

If you use these assemblies, you should also cite the publication describing Bakta:

[3] Schwengers et al. "Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification." Microbial genomics (2021). doi: 10.1099/mgen.0.000685.
DOI: 10.15468/dl.nzpz6n
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phytoseiulus macropilis"
 ]
}

 The dataset includes 48 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038705-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.