cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3633101_d7.v1
title: MOESM8 of What are the effects of agricultural management on soil organic carbon in boreo-temperate systems?

description: Additional file 8. Articles Excluded at Full Text.
DOI: 10.6084/m9.figshare.c.3633122_d1.v1
title: Additional file 1: of Developing expressed sequence tag libraries and the discovery of simple sequence repeat markers for two species of raspberry (Rubus L.)

description: NCBI accession, locus name, and details of SSR, primer design and DNA sequence for red raspberry (R. idaeus). Highlight indicates those loci tested in R. idaeus and R. occidentalis genotypes with results shown in manuscript TableÂ 1. (XLSX 48 kb)
DOI: 10.6084/m9.figshare.c.3633101_d8.v1
title: MOESM9 of What are the effects of agricultural management on soil organic carbon in boreo-temperate systems?

description: Additional file 9. Long-Term Experimental (LTE) Sites Database.
DOI: 10.6084/m9.figshare.c.3633122_d2.v1
title: Additional file 2: of Developing expressed sequence tag libraries and the discovery of simple sequence repeat markers for two species of raspberry (Rubus L.)

description: NCBI accession, locus name, and details of SSR, primer design and DNA sequence for black raspberry (R. occidentalis). Highlight indicates those loci tested in R. idaeus and R. occidentalis genotypes with results shown in manuscript TableÂ 1. (XLSX 93 kb)
DOI: 10.17863/cam.13916
title: Additive manufacturing UK patent and publication data 2006-2015

description: The dataset is part of the project Bit by Bit: Capturing the value from the digital fabrication revolution, studying the emergence and adoption of 3D printing, funded by the Research Council UK (Grant No: RG70073, NMZM//209)
DOI: 10.17863/cam.101790
title: Research data supporting 'Imaging Light-Induced Migration of Dislocations in Halide Perovskites with 3D Nanoscale Strain Mapping'

description: Research data supporting "Imaging Light-Induced Migration of Dislocations in Halide Perovskites with 3D Nanoscale Strain Mapping". The .zip file contains all the data required to reproduce the main text and supporting figures. For more details see the read_me files located in the main folder and also subfolders. The primary data types are raw diffraction data (intensity counts per pixel) from Bragg coherent diffraction imaging scans performed at the I13-1 beamline of the Diamond Light Source Synchrotron in Didcot, UK. These data are in stacked .tif file format and are all organised according to the figure in which they are used. These tif stacks can then be reconstructed into real space objects ("reconstructions") using the MatLab code provided in the "reconstruction code" folder with instructions on how to use the code are contained in this folder's "read_me.txt" file. Data characterising the dislocations found in this work are generated though analysis of the dislocation-containing reconstructions according to the method outlined in the manuscript. This analysis was performed using Paraview software. The other data contained in this file are from photoluminescence microscopy measurements performed in Stranks group labs in Cambridge. Detailed equipment specifications and measurement methods are given in the linked manuscript. Hyperspectral mapping data is in .h5 format which can be opened using python and we recommend using the HyperSpy package linked in the relevant "read_me.txt" files. Time-resolved photoluminescence data are provided in .csv format for ease of plotting.
DOI: 10.17863/cam.100229
title: New Grange Broom Bedfordshire - excavations 2007-2012: Cambridge Archaeological Unit Digital Archive

description: The Cambridge Archaeological Unit (CAU) conducted a trial trench evaluation over the entire proposed quarry area in 2003, following geophysics and a transcription of aerial photographs. This revealed an early bronze Age ring ditch, large area of Middle Iron Age settlement and field systems, three Roman-era settlements and Anglo-Saxon activity. The areas containing the Roman and Anglo-Saxon activity were excluded from the extraction area, and the archaeological investigations focused on prehistoric archaeology. Excavation was undertaken in 2007, 2011 and 2012. They uncovered a substantial Middle Iron Age settlement, with several phases of enclosures apparent along with many hundreds of pits – including several hundred grain storage pits. The settlement is one of the largest of its kind, and was occupied for around 200 years from c.400 BC to c.200 BC.
DOI: 10.17863/cam.52195
title: Research data supporting "Structural controls on the hydrology of crevasses on the Greenland ice sheet"

description: This dataset contains stress estimations and crevasse and water surface maps across the Store Glacier region of West Greenland from satellite and UAV data. Methods are outlined in the associated paper, and detailed information on the interpretation and use of the data is provided in the README.txt file.
DOI: 10.6084/m9.figshare.c.3633242_d1.v1
title: Additional file 1: of Is adjunctive naturopathy associated with improved glycaemic control and a reduction in need for medications among type 2 Diabetes patients? A prospective cohort study from India

description: Codebook. (TXT 8 kb)
DOI: 10.6084/m9.figshare.c.3633254_d1.v1
title: Additional file 1: of Inferring synthetic lethal interactions from mutual exclusivity of genetic events in cancer

description: â  Inferring synthetic lethal interactions from mutual exclusivity of genetic events in cancerâ   Additional results on predicted synthetic lethal genes. (XLSX 963 kb)
DOI: 10.6084/m9.figshare.c.3633242_d2.v1
title: Additional file 2: of Is adjunctive naturopathy associated with improved glycaemic control and a reduction in need for medications among type 2 Diabetes patients? A prospective cohort study from India

description: Dataset. (XLS 57 kb)
DOI: 10.6084/m9.figshare.c.3633260_d1.v1
title: Additional file 1: of gtrellis: an R/Bioconductor package for making genome-level Trellis graphics

description: Visualization of multiple transcripts for TP53, TP63 and TP73. (ZIP 79 kb)
DOI: 10.17863/cam.89677
title: Analytical information for UPBEAT sample preparation

description: Supporting information about laboratory analysis for UPBEAT cohort. This is associated with the publication "Towards precision medicine in gestational diabetes: pathophysiology and glycemic patterns in pregnant women with obesity" in the Journal of Clinical Endocrinology and Metabolism
DOI: 10.6084/m9.figshare.c.3633326_d1.v1
title: Additional file 1: of Study of arsenic accumulation in rice and evaluation of protective effects of Chorchorus olitorius leaves against arsenic contaminated rice induced toxicities in Wistar albino rats

description: Supplementary data for arsenic accumulation and haemato biochemical parameter analysis in rat model. (XLSX 60Â kb)
DOI: 10.6084/m9.figshare.c.3633353_d2.v1
title: Additional file 3: of Systematic identification and analysis of frequent gene fusion events in metabolic pathways

description: Is a zip archive containing a tab-delimited table of all 3.8 million predicted fusions. (TXT 494892 kb)
DOI: 10.6084/m9.figshare.c.3633401_d1.v1
title: Additional file 3: Table S3. of Tsetse fly tolerance to T. brucei infection: transcriptome analysis of trypanosome-associated changes in the tsetse fly salivary gland

description: List of differentially expressed transcripts between SG + MG+ vs SG-MG-. (XLS 2344 kb)
DOI: 10.15468/dl.4ukreq
title: Occurrence Download

description: A dataset containing 25695 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Myiopsitta monachus (Boddaert, 1783)"
 ]
}

 The dataset includes 25695 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037886-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3633401_d4.v1
title: Additional file 11: Table S6. of Tsetse fly tolerance to T. brucei infection: transcriptome analysis of trypanosome-associated changes in the tsetse fly salivary gland

description: List of transcripts that showed increased expression in SG-MG+ due to the presence of the parasite in the midgut. (XLS 306Â kb)
DOI: 10.17863/cam.34455
title: Research data supporting "Finite electric displacement simulations of polar ionic solid-electrolyte interfaces: Application to NaCl(111)/aqueous NaCl solution"

description: GROMACS files and CP2K files, both input and output, required to reproduce the figures of the publication to which these data belong. That is to say classical and ab initio MD trajectories of a polar NaCl (111) slab in contact with NaCl(aq) electrolyte under a plethora of applied field. See readme.txt for detailed breakdown. GROMACS files were run on a local machine, CP2K was run on Archer with 384 cores and/or Beskow with 256 cores, again all such .pbs input files are provided.
DOI: 10.17863/cam.56726
title: Global VAR (GVAR) Database, 1979Q2-2019Q4

description: This is the latest version of the Global VAR (GVAR) dataset. The GVAR is a global modelling framework for analyzing the international macroeconomic transmission of shocks, taking into account drivers of economic activity, interlinkages and spillovers between different countries, and the effects of unobserved or observed common factors. This dataset includes quarterly macroeconomic variables for 33 economies (log real GDP, y, the rate of inflation, dp, short-term interest rate, r, long-term interest rate, lr, the log deflated exchange rate, ep, and log real equity prices, eq), as well as quarterly data on commodity prices (oil prices, poil, agricultural raw material, pmat, and metals prices, pmetal), over the 1979Q2 to 2019Q4 period. These 33 countries cover more than 90% of world GDP. $$ \ $$ It would be appreciated if use of the updated dataset could be acknowledged as: “Mohaddes, K. and M. Raissi (2020). Compilation, Revision and Updating of the Global VAR (GVAR) Database, 1979Q2-2019Q4. University of Cambridge: Judge Business School (mimeo)”.
DOI: 10.6084/m9.figshare.c.3633455_d2.v1
title: MOESM6 of Transcriptional program for nitrogen starvation-induced lipid accumulation in Chlamydomonas reinhardtii

description: Additional file 6: Table S5. List of metabolic TAG production related genes varying during N starvation and LAP. At least 30 metabolic genes that have a direct functional role in TAG production are differentially expressed during N starvation. Expression pattern of these metabolic targets in S starvation is much more similar than in P starved cells. N starvation co-regulated module membership and predicted TRs are also shown.
DOI: 10.6084/m9.figshare.c.3633455_d3.v1
title: MOESM2 of Transcriptional program for nitrogen starvation-induced lipid accumulation in Chlamydomonas reinhardtii

description: Additional file 2: Table S2. Transcriptional changes on the cellular hallmarks of N starvation. For each functional hallmark, each differentially regulated transcript is grouped into a distinctive pathway. Phytozome locus name, gene names and description, co-regulated module membership, timestamp and direction of regulation are indicated.
DOI: 10.6084/m9.figshare.c.3633470_d1.v1
title: Additional file 21: Tree S11. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: POY Tree, estimated using parameter scheme 3221 (see Methods section). (TRE 12 kb)
DOI: 10.6084/m9.figshare.c.3633455_d4.v1
title: MOESM1 of Transcriptional program for nitrogen starvation-induced lipid accumulation in Chlamydomonas reinhardtii

description: Additional file 1: Table S1. Comprehensive list of the transcriptional changes. As in Table 1, each transcriptional stage is hierarchically itemized into transcriptional waves, co-regulated modules and finally transcripts. Each wave has a link to a different sheet where each of the transcripts are defined, including their co-regulated module membership. Timestamp of co-regulated module is highlighted with different colors, using the same color map as in Fig. 1c-d.
DOI: 10.6084/m9.figshare.c.3633467_d2.v1
title: Additional file 2 of Geographic variation in the intended choice of adjuvant treatments for women diagnosed with screen-detected breast cancer in Queensland

description: Supplementary Figures. (ZIP 28672 kb)
DOI: 10.6084/m9.figshare.c.3633470_d2.v1
title: Additional file 9: Tree S13. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: Scarabaeinae ML tree of dataset DT3 using at least 5 genes (including 18Â s, 28sd2, 28sd3, CAD, 16Â s, Tp1, COI, CAD). (TREE 5 kb)
DOI: 10.6084/m9.figshare.c.3633455_d5.v1
title: MOESM5 of Transcriptional program for nitrogen starvation-induced lipid accumulation in Chlamydomonas reinhardtii

description: Additional file 5: Table S4. List of predicted genes with ρ &gt; 1. List of transcripts downregulated during N starvation predicted to result in higher TAG to biomass ratio upon gene knockdown. For each gene, we present the computed ρ value, the co-regulated module membership, the time of module downregulation and the predicted TR(s) regulating such module(s).
DOI: 10.6084/m9.figshare.c.3633470_d3.v1
title: Additional file 19: Tree S9. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: POY Tree, estimated using parameter scheme 221 (see Methods section). (TRE 12 kb)
DOI: 10.17863/cam.62269
title: Research data supporting Public attitudes towards screening for kidney cancer: an online survey

description: This is the data supporting the analysis published in this article. A data dictionary is also provided with details of the response options, variable names and coding.
DOI: 10.6084/m9.figshare.c.3633470_d4.v1
title: Additional file 10: Tree S1. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: Scarabaeinae ML tree of dataset ALL. (TREE 37 kb)
DOI: 10.17863/cam.15864
title: Research data supporting "Efficient singlet fission and triplet-pair emission in a family of zethrene diradicaloids"

description: Data files underlying figures in paper
DOI: 10.6084/m9.figshare.c.3633470_d10.v1
title: Additional file 8: Tree S12. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: Scarabaeinae ML tree of dataset ALL using at least 4 genes (including 18Â s, 28sd2, 28sd3, CAD, 16Â s, Tp1). (TREE 17 kb)
DOI: 10.6084/m9.figshare.c.3633470_d9.v1
title: Additional file 7: of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: Statistics for MrBayes Runs. (ZIP 395 kb)
DOI: 10.6084/m9.figshare.c.3633476_d7.v1
title: Additional file 5: of Genotypic and phenotypic analyses of a Pseudomonas aeruginosa chronic bronchiectasis isolate reveal differences from cystic fibrosis and laboratory strains

description: (XLSX 63Â kb)
DOI: 10.6084/m9.figshare.c.3633503_d4.v1
title: Additional file 6: of Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

description: Primers used for qRT-PCR in this study.
DOI: 10.6084/m9.figshare.c.3633470_d12.v1
title: Additional file 1: Table S1. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: Accession numbers and vouchers information. (XLSX 64 kb)
DOI: 10.17863/cam.59015
title: Dataset for 'Improved mechanical properties through recycling of Y-Ba-Cu-O bulk superconductors'

description: Raw data that's obtained from experiments as used for preparing figure-6 and figure-14 are provided.
DOI: 10.6084/m9.figshare.c.3633470_d13.v1
title: Additional file 20: Tree S10. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: POY Tree, estimated using parameter scheme 3211 (see Methods section). (TRE 12 kb)
DOI: 10.6084/m9.figshare.c.3633470_d14.v1
title: Additional file 14: Tree S4. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: MrBayes 50% majority consensus tree with support statistics. (TRE 270 kb)
DOI: 10.15468/dl.x8uhpd
title: Occurrence Download

description: A dataset containing 419 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Baccharis elliptica Gardner"
 ]
}

 The dataset includes 419 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037887-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3633470_d15.v1
title: Additional file 13: Table S7. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: Robinson-Fold distance and proportion of shared clades between ML analyses using datasets ALL, G20 and DT3 as well as BI with MrBayes using G20 dataset. (XLS 27 kb)
DOI: 10.15468/dl.fdxdtd
title: Occurrence Download

description: A dataset containing 419 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Baccharis elliptica Gardner"
 ]
}

 The dataset includes 419 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037888-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3633470_d22.v1
title: Additional file 18: Tree S8. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: POY Tree, estimated using parameter scheme 211 (see Methods section). (TRE 12 kb)
DOI: 10.6084/m9.figshare.c.3633470_d23.v1
title: Additional file 23: Table S9. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: The list of Scarabaeinae genera attributed to the tribe Ateuchini and category incertae sedis. (XLS 40 kb)
DOI: 10.6084/m9.figshare.c.3633539_d5.v1
title: Additional file 5: of Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection

description: Non-synonymous SNPs between prototype strain PA14 and strains RP73, RP45 and RP1. (XLS 2195Â kb)
DOI: 10.6084/m9.figshare.c.3633470_d24.v1
title: Additional file 22: Table S8. of Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

description: Bootstrap support in ML and posterior probabilities in BI analyses for the major inferred Scarabaeinae lineages. (XLSX 38 kb)
DOI: 10.6084/m9.figshare.c.3633563_d3.v1
title: Additional file 5: of Coagulative safety of epidural catheters after major upper gastrointestinal surgery: advanced and routine coagulation analysis in 38 patients

description: Raw data with explanation of field codes in first lines. (TXT 18 kb)
DOI: 10.6084/m9.figshare.c.3633572_d1.v1
title: Additional file 1: of Does standing or sitting position of the anesthesiologist in the operating theatre influence sevoflurane exposure during craniotomies?

description: Values of each measurements. (XLSX 9 kb)
DOI: 10.17863/cam.12450
title: Research data supporting "X-ray diffraction analysis of cubic zincblende III-nitrides"

description: Figure 6: XRD peak width of an optimized zincblende GaN sample displayed in a traditional Williamson-Hall plot with fits for Lorentzian (n = 1) and Gaussian shape peaks (n = 2). Figure 7: Extrapolated peak width β_hkl ×|Q_hkl| in reciprocal space as a function of polar angle Chi and scattering vector magnitude |Q_hkl| estimated from a series of skew-symmetric ω-scans. Figure 8: Decrease of the XRD ω-linewidth (FWHM) of the 002 reflection with increasing film thickness for oriented zincblende GaN grown on 3C-SiC at Cambridge University. Figure 9: An example for a XRD wafer bow analysis of a 4'' 3C-SiC/Si template showing the shift of the maximum of ω-scans at different positions on the wafer.
DOI: 10.6084/m9.figshare.c.3633584_d1.v1
title: Additional file 2: Table S1. of Detection of a novel astrovirus from a black-naped monarch (Hypothymis azurea) in Cambodia

description: List of sequences used for phylogenetic tree. (XLSX 46 kb)
DOI: 10.17863/cam.75449
title: Data in support of "Refinement of the stress-enhanced fear learning model of post-traumatic stress disorder: a behavioural and molecular analysis"

description: These data (.xlsx) comprise behavioural measures of conditioned freezing scores, and quantifications of protein expression as measured using western blotting. The accompanying metadata (.docx) provide information on the presentation of the data and explanation of calculations.
DOI: 10.6084/m9.figshare.c.3633623_d4.v1
title: Additional file 5: of Sea lampreys elicit strong transcriptomic responses in the lake trout liver during parasitism

description: Siscowet DESeq2: DESeq2 analysis of transcripts from parasitized versus nonparasitized siscowet livers. (XLSX 7727 kb)
DOI: 10.6084/m9.figshare.c.3633638_d1.v1
title: Additional file 1: of Volume kinetic evaluation of fluid turnover after oral intake of tap water, lemonade and saline in volunteers

description: Complete laboratory results. (XLS 48 kb)
DOI: 10.6084/m9.figshare.c.3633644_d1.v1
title: Additional file 1: Table S1. of Multiple-locus variable-number tandem repeat analysis potentially reveals the existence of two groups of Anaplasma phagocytophilum circulating in cattle in France with different wild reservoirs

description: Characteristics and qPCR results for the 101 A. phagocytophilum wildlife samples used in this study. (XLSX 17 kb)
DOI: 10.17863/cam.109686
title: Research data supporting "Chemical Softness in Aromatic Adsorption: Benzene, Nitrobenzene and Anisole on Pt{111}"

description: Data relating to calculations of chemical softness for adsorbed molecules (benzene, nitrobenzene, anisole) on the Pt{111} surface. Calculations were performed using the CASTEP and OptaDOS codes and the dataset contains input and output files for these. Also in-house code used in the analysis of the data (cross-correlation of density of states data for differently charges systems, and topological analysis of charge density) is provided. Detailed descriptions are included in multiple separate readme files to be found within the dataset.
DOI: 10.6084/m9.figshare.c.3633623_d5.v1
title: Additional file 4: of Sea lampreys elicit strong transcriptomic responses in the lake trout liver during parasitism

description: Lean edgeR: edgeR analysis of transcripts from parasitized versus nonparasitized lean livers. (XLSX 6360 kb)
DOI: 10.15468/dl.pt6qz3
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Caesalpinia sappan L.",
 "Year 2000-2025"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022810-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.