cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20020650.v1
title: Surface Modification of Aluminized Cu-10Fe Alloy by High Current Pulsed Electron Beam

description: A Cu-10Fe alloy with magnetron sputtered Al films was irradiated by high current pulsed electron beam (HCPEB) with various pulse numbers, next changes of its microstructure and corrosion property were investigated. Compared with the initial sample, microhardness and corrosion resistance of the aluminized Cu-10Fe alloys after the HCPEB treatment are remarkably improved with increasing pulse numbers. This improvement could be attributed to formation of Al2Cu intermetallic compounds, occurrence of liquid phase separation and grain refinement in the surface layer of the Cu-10Fe alloy during the process of rapid remelting and solidification induced by the HCPEB treatment.
DOI: 10.6084/m9.figshare.12680451
title: Additional file 13 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 13. The transcription factors (TFs) in primary stems (PS) vs transitional stems (TS).
DOI: 10.6084/m9.figshare.12680460.v1
title: Additional file 16 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 16. Shared genes in differentially expressed genes (DEGs) and differentially 5-methylcytosine methylated genes (DMGs) in transitional stems (TS) vs secondary stems (SS).
DOI: 10.6084/m9.figshare.12680466.v1
title: Additional file 1 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 1. Summary of the methylation ratio in different sequence contexts (CG, CHG, and CHH) in developmental stems of Populus trichocarpa.
DOI: 10.6084/m9.figshare.7961783.v1
title: Additional file 1 of GNE: a deep learning framework for gene network inference by aggregating biological information

description: Table S1. Includes yeast gene pairs predicted by GNE with probabilities of 0.5 or higher. (XLSX 109 kb)
DOI: 10.6084/m9.figshare.12680401
title: Additional file 1 of Correlation between percutaneous transthoracic needle biopsy and recurrence in stage I lung cancer: a systematic review and meta-analysis

description: Additional file 1.
DOI: 10.6084/m9.figshare.12680454
title: Additional file 14 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 14. The transcription factors (TFs) in transitional stems (TS) vs secondary stems (SS).
DOI: 10.6084/m9.figshare.12680454.v1
title: Additional file 14 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 14. The transcription factors (TFs) in transitional stems (TS) vs secondary stems (SS).
DOI: 10.6084/m9.figshare.12680457.v1
title: Additional file 15 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 15. Shared genes in differentially expressed genes (DEGs) and differentially 5-methylcytosine methylated genes (DMGs) in primary stems (PS) vs transitional stems (TS).
DOI: 10.6084/m9.figshare.13204651.v1
title: Additional file 1 of Identification of cancer stem cell-related biomarkers in intestinal-type and diffuse-type gastric cancer by stemness index and weighted correlation network analysis

description: Additional file 1: Table S1. The DEGs between the IGC and normal tissues. Table S2. The DEGs between the DGC and normal tissues.
DOI: 10.6084/m9.figshare.13729105
title: Selection and validation of suitable reference genes in adipose tissue of Jianzhou Da'er Goat (<i>Capra hircus</i>)

description: Reverse transcription quantitative real-time PCR (RT-qPCR) is a common and high-efficiency technique for detecting the mRNA levels of genes where suitable reference genes were introduced to normalize the data of RT-qPCR. However, little is known about the suitable reference genes in the adipose tissue of Jianzhou da’er goat. Here, six housekeeping genes, including the ACTB, <i>ALAS1</i>, <i>EIF3K</i>, <i>HSP90</i>, <i>RPLP0</i>, and UXT, were selected as candidate reference genes, while the FASN, <i>HSL</i>, <i>LPL</i>, and <i>PID1</i> were used as the target genes for the validation of the suitability of identified reference genes. After detecting the expression levels of selected genes, the geNorm, NormFinder, and RefFinder softwares were applied to analyze the obtained data of candidate reference genes. The suitability analysis showed that the HSP90 was the most stable candidate reference gene, followed by the ALAS1 and RPLP0 gene. The validation experiment not only verified that the HSP90 was more stable than ACTB as the reference gene, but also confirmed that the HSP90 alone and a combination of HSP90, <i>ALAS1</i>, and RPLP0 could play the same roles in the normalization of target genes. Therefore, we strongly suggested that the HSP90 alone and the combination of three genes (HSP90, <i>ALAS1</i>, and RPLP0) could be used as the suitable reference for normalizing gene expression data in adipose tissue of Jianzhou da’er goat.
DOI: 10.6084/m9.figshare.12680416
title: Additional file 3 of Carbon migration and metagenomic characteristics during anaerobic digestion of rice straw

description: Additional file 3. Abundance of functions on enzyme level.
DOI: 10.6084/m9.figshare.12680416.v1
title: Additional file 3 of Carbon migration and metagenomic characteristics during anaerobic digestion of rice straw

description: Additional file 3. Abundance of functions on enzyme level.
DOI: 10.6084/m9.figshare.12680457
title: Additional file 15 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 15. Shared genes in differentially expressed genes (DEGs) and differentially 5-methylcytosine methylated genes (DMGs) in primary stems (PS) vs transitional stems (TS).
DOI: 10.6084/m9.figshare.12680410.v1
title: Additional file 2 of Carbon migration and metagenomic characteristics during anaerobic digestion of rice straw

description: Additional file 2. Abundance of functions on KO level.
DOI: 10.6084/m9.figshare.12680460
title: Additional file 16 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 16. Shared genes in differentially expressed genes (DEGs) and differentially 5-methylcytosine methylated genes (DMGs) in transitional stems (TS) vs secondary stems (SS).
DOI: 10.6084/m9.figshare.20020650
title: Surface Modification of Aluminized Cu-10Fe Alloy by High Current Pulsed Electron Beam

description: A Cu-10Fe alloy with magnetron sputtered Al films was irradiated by high current pulsed electron beam (HCPEB) with various pulse numbers, next changes of its microstructure and corrosion property were investigated. Compared with the initial sample, microhardness and corrosion resistance of the aluminized Cu-10Fe alloys after the HCPEB treatment are remarkably improved with increasing pulse numbers. This improvement could be attributed to formation of Al2Cu intermetallic compounds, occurrence of liquid phase separation and grain refinement in the surface layer of the Cu-10Fe alloy during the process of rapid remelting and solidification induced by the HCPEB treatment.
DOI: 10.6084/m9.figshare.21069323
title: Additional file 2 of Label-free quantitative proteomic analysis of ethanamizuril-resistant versus -sensitive strains of Eimeria tenella

description: Additional file 2: Table S6.  Peptides identified by label-free quantitative proteomic analysis of the ethanamizuril sensitive and resistant Eimeria tenella strains.
DOI: 10.6084/m9.figshare.12680478.v1
title: Additional file 5 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 5. Relative proportions of mCs in three sequence contexts (CG, CHG and CHH) in Populus trichocarpa stems.
DOI: 10.6084/m9.figshare.20020638
title: Microwave Absorbing Properties of NiFe2O4 Nanosheets Synthesized Via a Simple Surfactant-Assisted Solution Route

description: NiFe2O4 nanosheets have been synthesized via a simple surfactant-assisted solution route, which are confirmed by X-ray powder diffraction, scanning electron microscopy and transmission electron microscopy. The NiFe2O4 sample exhibits the sheet-like structure, with width varying from 200 to 800 nm and thickness ranging from 20 to 60 nm. The electromagnetic properties of NiFe2O4 nanosheets-paraffin composites have been deeply investigated. The multiple dielectric relaxation loss in NiFe2O4 nanosheets is attributed to the size distribution and morphology of the NiFe2O4 nanosheets. The magnetic loss in the present system is caused mainly by the natural resonance. An absorber with a thickness of 4.3 mm exhibits an optimal reflection loss (RL) value of -47.1 dB at 7.67 GHz. RL values exceeding -20 dB in the 2.68-17.96 GHz range are obtained by choosing an appropriate absorption-layer thickness between 1.9 and 10 mm. Not only the RL peak frequency but also the number of the peaks can be well explained by the quarter-wavelength cancellation model.
DOI: 10.6084/m9.figshare.20020665.v1
title: The Analysis of the Microstructure and Mechanical Properties of Low Carbon Microalloyed Steels after Ultra Fast Cooling

description: In this paper, two low carbon microalloyed steels, named as steel A and steel B, were fabricated by ultra fast cooling (UFC). In both steels, the microstructures containing quasi polygonal ferrite (QF), acicular ferrite (AF) and granular bainite (GB) can be obtained by UFC process. The amount of AF in steel B is more than that in steel A. The size and distribution of precipitates (Nb/Ti carbonitrides) in steel B are finer and more dispersed than those of in steel A due to relatively low finish cooling temperature. The mechanical properties of both steels are effectively enhanced by UFC process. UFC process produces low-temperature transformation microstructures containing a significant amount of AF. The mechanical properties of steel B were more satisfactory than those of steel A due to the finer average grain size, the greater amount of the volume fractions and smaller size of secondary phases.
DOI: 10.6084/m9.figshare.21069326.v1
title: Additional file 3 of Label-free quantitative proteomic analysis of ethanamizuril-resistant versus -sensitive strains of Eimeria tenella

description: Additional file 3:  Table S7. Proteins identified by label-free quantitative proteomic analysis of ethanamizuril sensitive and resistant Eimeria tenella strains.
DOI: 10.6084/m9.figshare.14253453
title: Additional file 1 of Women’s cancers in China: a spatio-temporal epidemiology analysis

description: Additional file 1: Table S1. The incidence and mortality of breast, cervical and ovarian cancer in different regions of the world (unit:1/100,000).
DOI: 10.6084/m9.figshare.13729105.v1
title: Selection and validation of suitable reference genes in adipose tissue of Jianzhou Da'er Goat (<i>Capra hircus</i>)

description: Reverse transcription quantitative real-time PCR (RT-qPCR) is a common and high-efficiency technique for detecting the mRNA levels of genes where suitable reference genes were introduced to normalize the data of RT-qPCR. However, little is known about the suitable reference genes in the adipose tissue of Jianzhou da’er goat. Here, six housekeeping genes, including the ACTB, <i>ALAS1</i>, <i>EIF3K</i>, <i>HSP90</i>, <i>RPLP0</i>, and UXT, were selected as candidate reference genes, while the FASN, <i>HSL</i>, <i>LPL</i>, and <i>PID1</i> were used as the target genes for the validation of the suitability of identified reference genes. After detecting the expression levels of selected genes, the geNorm, NormFinder, and RefFinder softwares were applied to analyze the obtained data of candidate reference genes. The suitability analysis showed that the HSP90 was the most stable candidate reference gene, followed by the ALAS1 and RPLP0 gene. The validation experiment not only verified that the HSP90 was more stable than ACTB as the reference gene, but also confirmed that the HSP90 alone and a combination of HSP90, <i>ALAS1</i>, and RPLP0 could play the same roles in the normalization of target genes. Therefore, we strongly suggested that the HSP90 alone and the combination of three genes (HSP90, <i>ALAS1</i>, and RPLP0) could be used as the suitable reference for normalizing gene expression data in adipose tissue of Jianzhou da’er goat.
DOI: 10.6084/m9.figshare.6389306
title: Additional file 1: of Study of spontaneous mutations in the transmission of poplar chloroplast genomes from mother to offspring

description: Table S1. The ratio of split-reads mapped to each cpDNA of six Populus species using Bowtie and BWA. Table S2. The genome size of P. trichocarpa cpDNA was estimated using each of twelve sets of simulated reads (60 bp–10 k, 60 bp–100 k, 60 bp–1 M, 60 bp–10 M, 80 bp–10 k, 80 bp–100 k, 80 bp–1 M, 80 bp–10 M, 100 bp–10 k, 100 bp–100 k, 100 bp–1 M and 100 bp–10 M). Table S3. Basic statistics of 13 assemblies used for further analyses. Table S4. The cpDNA and gDNA ratios of read datasets for the three poplar clones I45, I69 and NL895. Table S5. The positions, reference and alternative base, types (Replace|Insert|Delete) and the genotypes of all 401 variants identified in the three poplar clones. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.14253515.v2
title: Additional file 1 of Research supporting malaria control and elimination in China over four decades: a bibliometric analysis of academic articles published in Chinese from 1980 to 2019

description: Additional file 1: Top 10 articles with high citation frequencies for the four periods.
DOI: 10.6084/m9.figshare.14253518.v1
title: Additional file 2 of Research supporting malaria control and elimination in China over four decades: a bibliometric analysis of academic articles published in chinese from 1980 to 2019

description: Additional file 2: Detailed information about the maps of keyword co-occurrence network output by VOSviewer.
DOI: 10.6084/m9.figshare.14253456.v1
title: Additional file 2 of Women’s cancers in China: a spatio-temporal epidemiology analysis

description: Additional file 2: Table S2. The incidence and mortality of breast, cervical and ovarian cancer in each provincial unit from 2010 to 2015 (unit:1/100,000).
DOI: 10.25345/c5qf8jw2s
title: MassIVE MSV000094044 - Evaluation of the carrier proteome limit on a ZenoTOF instrument
title: This analysis sought to evaluate the carrier proteome limits on a SCIEX 7600 ZenoTOF mass spectrometer. A 9 channel TMTPro digest standard previously described in Orsburn, et al., Nature Communcations 2022 was used. . Briefly, a K562 human peptide digest standard (Promega) and E.coli peptide standard (Waters) were resuspended in 100mM TEAB (SimpliFi) and aliquots of 10 micrograms of each were labeled with the TMTPro reagents, 126, 127n, 128n, 129n, 130n, 131n, 132n, 133n and 134 and the reactions quenched with hydroxylamine according to vendor instructions. Labeled peptides were combined to maintain and equal concentration of K562 digest in each lane by combining 2 micrograms of each. E.coli peptides were diluted to 10to5to1 in TEAB and combined with the respective lanes to result in a repeating E.coli concentration of 20% and 10% of the first channel. The combined peptides were diluted to 100ng/uL total concentration and analyzed on a SCIEX 7600 ZenoTOF instrument coupled to a Waters H Class microflow UHPLC. A 60 minute gradient was used at a flow rate of 5 uL/min using a Phenomenex column. A top 10 data dependent method was used for all analysis. The resulting output files were converted to MGF using the ProteoWizard software and the MGF files were processed in Proteome Discoverer 2.4SP1 using a 15ppm MS1 and 0.03 Da MS/MS tolerance window. Static carbamidomethylation of cysteine and TMTPro tags on lysine and peptide N-termini were used as well as dynamic modifications of methionine oxidation to search against a combination of the SwissProt Human and E.coli FASTA. The cRAP database was used for contaminant identification.
DOI: 10.6084/m9.figshare.21069401.v2
title: Additional file 6 of Analysis of complete chloroplast genome sequences and insight into the phylogenetic relationships of Ferula L.

description: Additional file 6: Table S6. Non-synonymous to synonymous nucleotide substitution rates (Ka/Ks) of Ferula species.
DOI: 10.6084/m9.figshare.20020749.v1
title: Co3O4-ZnO P-N Heterostructure Nanomaterials Film and its Enhanced Photoelectric Response to Visible Lights at Near Room Temperature

description: In this paper, Co3O4-ZnO nanomaterials with Co3O4 doping mass fractions of 0%, 2.13%, 4.13%, and 6.13% were prepared by sol-gel method. In order to explain and confirm the influence of the incorporation of Co3O4 on the surface morphology and gas sensitivity of ZnO at a relatively low gas concentration, additional studies such as XRD, XPS, SEM, EDS and UV-vis spectroscopy were performed. And its photoelectric response to 100 ppm acetone at near room temperature and visible light irradiation was studied. Due to the formation of P-N heterojunctions, the Co3O4-ZnO heterostructural nanoparticles has a highe response to low concentrations of acetone gas than undoped ZnO nanoparticles even at operating temperatures as low as 30ºC. The addition of Co3O4 improves the sensitivity and selectivity of ZnO thick films. The sensitivity of the 4.13wt% Co3O4-ZnO sample to 100 ppm acetone at a working temperature of 30ºC was 24.36. The light excitation effect was significantly enhanced. Under visible light irradiation, the sensitivity can reach 37.21. In addition, the Co3O4-ZnO P-N heterojunction model was combined with visible light excitation theory to further explore the mechanism of gas sensing reaction.
DOI: 10.6084/m9.figshare.21069392.v2
title: Additional file 3 of Analysis of complete chloroplast genome sequences and insight into the phylogenetic relationships of Ferula L.

description: Additional file 3: Table S3. Distribution of repeat sequences in the 14 studied Ferula plastomes.
DOI: 10.6084/m9.figshare.14253515.v1
title: Additional file 1 of Research supporting malaria control and elimination in China over four decades: a bibliometric analysis of academic articles published in chinese from 1980 to 2019

description: Additional file 1: Top 10 articles with high citation frequencies for the four periods.
DOI: 10.6084/m9.figshare.14253518
title: Additional file 2 of Research supporting malaria control and elimination in China over four decades: a bibliometric analysis of academic articles published in Chinese from 1980 to 2019

description: Additional file 2: Detailed information about the maps of keyword co-occurrence network output by VOSviewer.
DOI: 10.6084/m9.figshare.21069395
title: Additional file 4 of Analysis of complete chloroplast genome sequences and insight into the phylogenetic relationships of Ferula L.

description: Additional file 4: Table S4. Distribution of simple sequence repeats (SSRs) in the 14 studied Ferula plastomes.
DOI: 10.6084/m9.figshare.21069398
title: Additional file 5 of Analysis of complete chloroplast genome sequences and insight into the phylogenetic relationships of Ferula L.

description: Additional file 5: Table S5. Nucleotide variability (Pi) of Ferula species.
DOI: 10.6084/m9.figshare.21069402.v1
title: Additional file 1 of Integrative network analysis of circular RNAs reveals regulatory mechanisms for hepatic specification of human iPSC-derived endoderm

description: Additional file 1. Appendix. 1: Changed genes lists of GSE66282 and GSE128060.
DOI: 10.6084/m9.figshare.12156387.v1
title: ESM tables from Cuticular reticulation replicates the pattern of epidermal cells in lowermost Cambrian scalidophoran worms

description: Data of reticulation shape, size of extant and fossil ecdysozoans.
DOI: 10.6084/m9.figshare.6389306.v1
title: Additional file 1: of Study of spontaneous mutations in the transmission of poplar chloroplast genomes from mother to offspring

description: Table S1. The ratio of split-reads mapped to each cpDNA of six Populus species using Bowtie and BWA. Table S2. The genome size of P. trichocarpa cpDNA was estimated using each of twelve sets of simulated reads (60 bp–10 k, 60 bp–100 k, 60 bp–1 M, 60 bp–10 M, 80 bp–10 k, 80 bp–100 k, 80 bp–1 M, 80 bp–10 M, 100 bp–10 k, 100 bp–100 k, 100 bp–1 M and 100 bp–10 M). Table S3. Basic statistics of 13 assemblies used for further analyses. Table S4. The cpDNA and gDNA ratios of read datasets for the three poplar clones I45, I69 and NL895. Table S5. The positions, reference and alternative base, types (Replace|Insert|Delete) and the genotypes of all 401 variants identified in the three poplar clones. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.22638029
title: Additional file 1 of ART outcomes of patients in women with Isolated Hypogonadotropic Hypogonadism: a retrospective study in China

description: Additional file 1: Supplementary Table 1. ROC curves of selected ovarian reservation related markers in COS cycles to predict high and low ovarian response in IHH patients. Supplementary Table 2. Univariate logistic regression analyse of clinical pregnancy in IHH group. Supplementary Table 3. Linear regression model for the usage of Gn in IHH patients who underwent ET.
DOI: 10.6084/m9.figshare.14253638.v1
title: Additional file 1 of A network pharmacology-based investigation on the bioactive ingredients and molecular mechanisms of Gelsemium elegans Benth against colorectal cancer

description: Additional file 1.
DOI: 10.15468/dl.xn2wk9
title: Occurrence Download

description: A dataset containing 383 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Orobanche rigens Loisel."
 ]
}

 The dataset includes 383 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064554-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6f8awm
title: Occurrence Download

description: A dataset containing 261 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ochna pervilleana Baill."
 ]
}

 The dataset includes 261 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064557-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gsssbd
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ophiorrhiza emeiensis (H.S.Lo) Razafim. & Rydin"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064556-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dba4nq
title: Occurrence Download

description: A dataset containing 2316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micrurus tener Baird & Girard, 1853",
 "Geometry POLYGON((-124.756451627043 24.5232175268442, -124.756451627043 49.3844869955705, -66.9490903544593 49.3844869955705, -66.9490903544593 24.5232175268442, -124.756451627043 24.5232175268442))"
 ]
}

 The dataset includes 2316 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064555-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.