cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14879523.v2
title: Nyström-based spectral clustering using airborne LiDAR point cloud data for individual tree segmentation

description: The spectral clustering method has notable advantages in segmentation. But the high computational complexity and time consuming limit its application in large-scale and dense airborne Light Detection and Ranging (LiDAR) point cloud data. We proposed the Nyström-based spectral clustering (NSC) algorithm to decrease the computational burden. This novel NSC method showed accurate and rapid in individual tree segmentation using point cloud data. The K-nearest neighbour-based sampling (KNNS) was proposed for the Nyström approximation of voxels to improve the efficiency. The NSC algorithm showed good performance for 32 plots in China and Europe. The overall matching rate and extraction rate of proposed algorithm reached 69% and 103%. For all trees located by Global Navigation Satellite System (GNSS) calibrated tape-measures, the tree height regression of the matching results showed an value of 0.88 and a relative root mean square error (RMSE) of 5.97%. For all trees located by GNSS calibrated total-station measures, the values were 0.89 and 4.49%. The method also showed good performance in a benchmark dataset with an improvement of 7% for the average matching rate. The results demonstrate that the proposed NSC algorithm provides an accurate individual tree segmentation and parameter estimation using airborne LiDAR point cloud data.
DOI: 10.25403/upresearchdata.25204613.v1
title: Participant's perception of Ford Resource's contribution to mitigate poverty

description: The study aimed to explore how the Ford Resource and Engagement Centre (FREC) programme assists in mitigating poverty from the perspective of its participants. The research used a qualitative approach, including explorative and descriptive methods, and an instrumental case study design. Purposive sampling was used to select ten participants from the FREC programme. All the participants run small bussinesses around Mamelodi and Nellmapius area. Data was collected through one-on-one semi-structured interviews and analysed through thematic analysis according to Braun & Clarke (2022). Six themes were identified and furthur broken into sub-themes The findings of the research indicate that the FREC programme plays a significant role in mitigating poverty, and this is outlined with support of the participant's quotations and literature. The study further outlines recommendations for future studies.
DOI: 10.6084/m9.figshare.7015475.v1
title: MOESM10 of The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm

description: Additional file 10. RPKM values for RNA-seq in BmE cells after treated with 20E or DMSO.
DOI: 10.6084/m9.figshare.12258161
title: Additional file 7 of The neovaginal microbiome of transgender women post-gender reassignment surgery

description: Additional file 7: Supplemental Table 1. Percent coverage and mean normalized bacterial spectral counts of KEGG ko level functions from neovaginal and cis vaginal compartments. Supplemental Table 2. Proteins differentially abundant between neovaginas and cis vaginas. Supplemental Table 3. Enriched host pathways positively associated with the neovaginal compartment compared to the cis vaginal compartment. Supplemental Table 4. Enriched host pathways negatively associated with the neovaginal compartment compared to the cis vaginal compartment. Supplemental Table 5. Human protein correlates of bacterial diversity as measured by Shannon's H index. Supplemental Table 6. Enriched host pathways positively associated with bacterial diversity as measured by Shannon's H index. Supplemental Table 7. Enriched host pathways negatively associated with bacterial diversity as measured by Shannon's H index. Supplemental Table 8. Immune cell protein set signatures that overlap with signatures enriched in the neovagina. Supplemental Table 9. Taxa included in the curated database and each taxa's protein detection from initial TREMBL bacteria database search.
DOI: 10.6084/m9.figshare.12258170.v1
title: Climate-adaptive Design of Historic Villages and Dwellings in a Typhoon-prone Region in Southernmost Mainland China

description: This paper explores the adaptive design of historic villages and dwellings in response to the typhoon climate of the Leizhou Peninsula. A field investigation involving 917 historic villages was conducted. The physical features of the villages were superimposed with the visualized spatial trajectories of the cyclones. Case studies were also adopted to reveal their windproofing mechanisms. The results show that villages are safeguarded through systematic approaches. First, planting windbreaks with appropriate densities and locations was a first line of defence. Second, dwellings were arranged to form a dense-alley pattern, through which the windward faces were reduced and rapid drainage was achieved. Third, the courtyard layout, strengthened exterior walls, and a set of roof protection technologies were applied to increase the stability and integrity of the building. Traditional wisdom was identified in that villages and dwellings were built with the philosophy of reducing the possibility of a disaster in an ordinary windstorm situation through appropriate rather than excessive windproof construction to achieve a balance between survival and development under resource constraints. This knowledge complements the traditional technologies of wind protection developed in other regions of the world and has modern significance for building climate-adaptive and environmentally friendly settlements and buildings.
DOI: 10.6084/m9.figshare.7015484.v1
title: MOESM1 of The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm

description: Additional file 1. ChIP-seq enriched peaks of H3K4me3, H3K4me1, and H3K27ac after 20E treatment.
DOI: 10.6084/m9.figshare.12782661.v1
title: Additional file 2 of ALKBH5 suppresses malignancy of hepatocellular carcinoma via m6A-guided epigenetic inhibition of LYPD1

description: Additional file 2 : Table S2. Target sequences of siRNAs and shRNAs utilized in this work.
DOI: 10.6084/m9.figshare.7015475
title: MOESM10 of The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm

description: Additional file 10. RPKM values for RNA-seq in BmE cells after treated with 20E or DMSO.
DOI: 10.6084/m9.figshare.25212734
title: Supporting Information and data for Curzi et al., 2024 - Tectonics - Tectonic evolution of the Eastern Southern Alps (Italy): a reappraisal from new structural data and geochronological constraints

description: This material includes the description of the investigation methods and the U-Pb data.
DOI: 10.6084/m9.figshare.25212734.v1
title: Supporting Information and data for Curzi et al., 2024 - Tectonics - Tectonic evolution of the Eastern Southern Alps (Italy): a reappraisal from new structural data and geochronological constraints

description: This material includes the description of the investigation methods and the U-Pb data.
DOI: 10.25919/qpxa-hs19
title: Parkes observations for project P630 semester 2008OCTS_11

description: We propose to carry out the most ambitious and comprehensive all-sky survey for pulsars and transient sources to date. Using the 20cm multibeam and a new digital filterbank array this survey will create a petabyte digital record of the sky that can be data mined in the future and used to search for relativistic binary and millisecond pulsars, RRATs, and extragalactic radio bursts. The survey should discover 100s of new millisecond and normal pulsars and help define the lower limit to pulsar periods, test theories of relativistic gravity, find transients and provide pulsars for gravitational wave detection.
DOI: 10.6084/m9.figshare.12782661
title: Additional file 2 of ALKBH5 suppresses malignancy of hepatocellular carcinoma via m6A-guided epigenetic inhibition of LYPD1

description: Additional file 2 : Table S2. Target sequences of siRNAs and shRNAs utilized in this work.
DOI: 10.6084/m9.figshare.12782664.v1
title: Additional file 3 of ALKBH5 suppresses malignancy of hepatocellular carcinoma via m6A-guided epigenetic inhibition of LYPD1

description: Additional file 3 : Table S3. Sequences of primers utilized in this study.
DOI: 10.6084/m9.figshare.12782667.v1
title: Additional file 4 of ALKBH5 suppresses malignancy of hepatocellular carcinoma via m6A-guided epigenetic inhibition of LYPD1

description: Additional file 4 : Table S4. Antibodies utilized in this work.
DOI: 10.6084/m9.figshare.12782664
title: Additional file 3 of ALKBH5 suppresses malignancy of hepatocellular carcinoma via m6A-guided epigenetic inhibition of LYPD1

description: Additional file 3 : Table S3. Sequences of primers utilized in this study.
DOI: 10.6084/m9.figshare.12782667
title: Additional file 4 of ALKBH5 suppresses malignancy of hepatocellular carcinoma via m6A-guided epigenetic inhibition of LYPD1

description: Additional file 4 : Table S4. Antibodies utilized in this work.
DOI: 10.6084/m9.figshare.7015484
title: MOESM1 of The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm

description: Additional file 1. ChIP-seq enriched peaks of H3K4me3, H3K4me1, and H3K27ac after 20E treatment.
DOI: 10.6084/m9.figshare.7015577.v1
title: MOESM6 of The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm

description: Additional file 6. The primers and histone modification status of 58 candidate enhancer elements were listed. The results of luciferase assays of candidate enhancers were also listed in the last few columns.
DOI: 10.6084/m9.figshare.12782690
title: Additional file 10 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 10: Data S7. Gene Ontology annotation and enrichment analysis of genes clustered in each module.
DOI: 10.6084/m9.figshare.12782690.v1
title: Additional file 10 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 10: Data S7. Gene Ontology annotation and enrichment analysis of genes clustered in each module.
DOI: 10.6084/m9.figshare.12782699.v1
title: Additional file 13 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 13: Data S8. Summary of Populus TALE transcription factors.
DOI: 10.6084/m9.figshare.12782717
title: Additional file 4 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 4: Data S2. Summary of differential expressed genes between two neighbouring growth stages for Neva and I-214.
DOI: 10.6084/m9.figshare.12782705
title: Additional file 15 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 15: Data S9. Primers used in this study for qPCR identification, gene cloning, and CRISPR vector construction.
DOI: 10.6084/m9.figshare.12782729
title: Additional file 8 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 8: Data S5. Gene Ontology annotation and enrichment analysis of differential expressed genes between Neva and I-214 at different growth stages.
DOI: 10.6084/m9.figshare.12782711
title: Additional file 2 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 2: Data S1. Expressed genes identified in all growth stages of Neva and I-214.
DOI: 10.6084/m9.figshare.12782726.v1
title: Additional file 7 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 7: Data S4. Summary of differential expressed genes between Neva and I-214 at different growth stages.
DOI: 10.6084/m9.figshare.7015589.v1
title: MOESM7 of The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm

description: Additional file 7. ChIP-seq enriched peaks of EcR after 20E treatment.
DOI: 10.6084/m9.figshare.12782732
title: Additional file 9 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 9: Data S6. Summary of differentially expressed transcription factors at different growth stages.
DOI: 10.6084/m9.figshare.12782699
title: Additional file 13 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 13: Data S8. Summary of Populus TALE transcription factors.
DOI: 10.6084/m9.figshare.12782705.v1
title: Additional file 15 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 15: Data S9. Primers used in this study for qPCR identification, gene cloning, and CRISPR vector construction.
DOI: 10.6084/m9.figshare.7015538
title: MOESM4 of The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm

description: Additional file 4. Putative DREs (enhancers) and promoters were defined through modification-based prediction.
DOI: 10.6084/m9.figshare.7015538.v1
title: MOESM4 of The genome-wide transcriptional regulatory landscape of ecdysone in the silkworm

description: Additional file 4. Putative DREs (enhancers) and promoters were defined through modification-based prediction.
DOI: 10.6084/m9.figshare.12782711.v1
title: Additional file 2 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 2: Data S1. Expressed genes identified in all growth stages of Neva and I-214.
DOI: 10.6084/m9.figshare.12782717.v1
title: Additional file 4 of Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates

description: Additional file 4: Data S2. Summary of differential expressed genes between two neighbouring growth stages for Neva and I-214.
DOI: 10.6084/m9.figshare.14355769
title: Additional file 8 of Loss of splicing factor IK impairs normal skeletal muscle development

description: Additional file 8: Table S2. The raw data of myod1 and pax7a in RNA-seq.
DOI: 10.6084/m9.figshare.14355544.v1
title: Additional file 13 of Comprehensive analysis of immune-related prognostic genes in the tumour microenvironment of hepatocellular carcinoma

description: Additional file 13: Supplementary Tables S11. ESTIMATE results for the TCGA-HCC dataset.
DOI: 10.6084/m9.figshare.14355535
title: Additional file 10 of Comprehensive analysis of immune-related prognostic genes in the tumour microenvironment of hepatocellular carcinoma

description: Additional file 10: Supplementary Tables S8. Enrichment results for the 144 immune-related hub genes.
DOI: 10.6084/m9.figshare.14355541
title: Additional file 12 of Comprehensive analysis of immune-related prognostic genes in the tumour microenvironment of hepatocellular carcinoma

description: Additional file 12: Supplementary Tables S10. Results of the multivariate Cox regression analysis.
DOI: 10.6084/m9.figshare.14355544
title: Additional file 13 of Comprehensive analysis of immune-related prognostic genes in the tumour microenvironment of hepatocellular carcinoma

description: Additional file 13: Supplementary Tables S11. ESTIMATE results for the TCGA-HCC dataset.
DOI: 10.6084/m9.figshare.14355538
title: Additional file 11 of Comprehensive analysis of immune-related prognostic genes in the tumour microenvironment of hepatocellular carcinoma

description: Additional file 11: Supplementary Tables S9. Results of the univariate Cox regression analysis.
DOI: 10.6084/m9.figshare.14355550
title: Additional file 15 of Comprehensive analysis of immune-related prognostic genes in the tumour microenvironment of hepatocellular carcinoma

description: Additional file 15: Supplementary Tables S13. Biomarkers in the TCGA-HCC dataset.
DOI: 10.6084/m9.figshare.14355559.v1
title: Additional file 18 of Comprehensive analysis of immune-related prognostic genes in the tumour microenvironment of hepatocellular carcinoma

description: Additional file 18: Supplementary Tables S16. TIDE results for GSE14520.
DOI: 10.6084/m9.figshare.14355451.v1
title: Additional file 1 of A novel tp53-associated nomogram to predict the overall survival in patients with pancreatic cancer

description: Additional file 1.
DOI: 10.25384/sage.6820517.v1
title: Supplementary_Material - Hematological Parameters Outperform Plasma Markers in Predicting Long-Term Mortality After Coronary Angiography

description: Supplementary_Material for Hematological Parameters Outperform Plasma Markers in Predicting Long-Term Mortality After Coronary Angiography by Crystel M. Gijsberts, Hester M. den Ruijter, Dominique P. V. de Kleijn, Albert Huisman, Maarten ten Berg, Mark de Groot, Richard H. A. van Wijk, Folkert W. Asselbergs, Michiel Voskuil, Gerard Pasterkamp, Wouter W. van Solinge, and Imo E. Hoefer in Angiology
DOI: 10.25384/sage.6801674
title: ANALYSIS_DO_FILES_050618 – Supplemental material for Ethnic political exclusion and terrorism: Analyzing the local conditions for violence

description: Supplemental material, ANALYSIS_DO_FILES_050618 for Ethnic political exclusion and terrorism: Analyzing the local conditions for violence by Holley E Hansen, Stephen C Nemeth and Jacob A Mauslein in Conflict Management and Peace Science
DOI: 10.25384/sage.6820517
title: Supplementary_Material - Hematological Parameters Outperform Plasma Markers in Predicting Long-Term Mortality After Coronary Angiography

description: Supplementary_Material for Hematological Parameters Outperform Plasma Markers in Predicting Long-Term Mortality After Coronary Angiography by Crystel M. Gijsberts, Hester M. den Ruijter, Dominique P. V. de Kleijn, Albert Huisman, Maarten ten Berg, Mark de Groot, Richard H. A. van Wijk, Folkert W. Asselbergs, Michiel Voskuil, Gerard Pasterkamp, Wouter W. van Solinge, and Imo E. Hoefer in Angiology
DOI: 10.25384/sage.6820550.v1
title: Supplemental Material, DS1_VET_10.1177_0300985818758467 - Proliferative Lesions of the Endometrium of 50 Four-Toed Hedgehogs (<i>Atelerix albiventris</i>)

description: Supplemental Material, DS1_VET_10.1177_0300985818758467 for Proliferative Lesions of the Endometrium of 50 Four-Toed Hedgehogs (<i>Atelerix albiventris</i>) by James K. Chambers, Takanori Shiga, Haruka Takimoto, Atsushi Dohata, Yasutsugu Miwa, Hiroyuki Nakayama, and Kazuyuki Uchida in Veterinary Pathology
DOI: 10.25384/sage.6825959
title: DittoSupplemental_figure_1_copy – Supplemental material for At Least Bias Is Bipartisan: A Meta-Analytic Comparison of Partisan Bias in Liberals and Conservatives

description: Supplemental material, DittoSupplemental_figure_1_copy for At Least Bias Is Bipartisan: A Meta-Analytic Comparison of Partisan Bias in Liberals and Conservatives by Peter H. Ditto, Brittany S. Liu, Cory J. Clark, Sean P. Wojcik, Eric E. Chen, Rebecca H. Grady, Jared B. Celniker, and Joanne F. Zinger in Perspectives on Psychological Science
DOI: 10.25384/sage.6820757
title: CongandAge_Norris_et_al.2015 – Supplemental material for The measurement of approximate number system acuity across the lifespan is compromised by congruency effects

description: Supplemental material, CongandAge_Norris_et_al.2015 for The measurement of approximate number system acuity across the lifespan is compromised by congruency effects by Jade Eloise Norris, Sarah Clayton, Camilla Gilmore, Matthew Inglis and Julie Castronovo in Quarterly Journal of Experimental Psychology
DOI: 10.25384/sage.6801788.v1
title: Spreadsheet_1 – Supplemental material for Mid-term outcome after arthroscopic treatment of femoroacetabular impingement: development of a predictive score

description: Supplemental material, Spreadsheet_1 for Mid-term outcome after arthroscopic treatment of femoroacetabular impingement: development of a predictive score by Luca Pierannunzii, Paolo Di Benedetto, Christian Carulli, Gennaro Fiorentino, Daniele Munegato, Manlio Panascì, Domenico Potestio, Filippo Randelli, Federico Della Rocca, Valentina Rosolen, Manuela Giangreco and Nicola Santori in HIP International
DOI: 10.25384/sage.6825959.v1
title: DittoSupplemental_figure_1_copy – Supplemental material for At Least Bias Is Bipartisan: A Meta-Analytic Comparison of Partisan Bias in Liberals and Conservatives

description: Supplemental material, DittoSupplemental_figure_1_copy for At Least Bias Is Bipartisan: A Meta-Analytic Comparison of Partisan Bias in Liberals and Conservatives by Peter H. Ditto, Brittany S. Liu, Cory J. Clark, Sean P. Wojcik, Eric E. Chen, Rebecca H. Grady, Jared B. Celniker, and Joanne F. Zinger in Perspectives on Psychological Science
DOI: 10.25384/sage.6820760
title: CongandAge_Norris_et_al.2015 – Supplemental material for The measurement of approximate number system acuity across the lifespan is compromised by congruency effects

description: Supplemental material, CongandAge_Norris_et_al.2015 for The measurement of approximate number system acuity across the lifespan is compromised by congruency effects by Jade Eloise Norris, Sarah Clayton, Camilla Gilmore, Matthew Inglis and Julie Castronovo in Quarterly Journal of Experimental Psychology
DOI: 10.25384/sage.6801698.v1
title: Bellet_Supplemental_Script_S2 – Supplemental material for Bereavement Outcomes as Causal Systems: A Network Analysis of the Co-Occurrence of Complicated Grief and Posttraumatic Growth

description: Supplemental material, Bellet_Supplemental_Script_S2 for Bereavement Outcomes as Causal Systems: A Network Analysis of the Co-Occurrence of Complicated Grief and Posttraumatic Growth by Benjamin W. Bellet, Payton J. Jones, Robert A. Neimeyer and Richard J. McNally in Clinical Psychological Science
DOI: 10.25384/sage.6833714
title: DS_10.1177_1558944718787892 – Supplemental material for Comparison of the Short-term and Long-term Effects of Surgery and Nonsurgical Intervention in Treating Carpal Tunnel Syndrome: A Systematic Review and Meta-analysis

description: Supplemental material, DS_10.1177_1558944718787892 for Comparison of the Short-term and Long-term Effects of Surgery and Nonsurgical Intervention in Treating Carpal Tunnel Syndrome: A Systematic Review and Meta-analysis by Qiyun Shi, Pavlos Bobos, Emily A. Lalone, Laura Warren and Joy C. MacDermid in HAND
DOI: 10.25384/sage.6820760.v1
title: CongandAge_Norris_et_al.2015 – Supplemental material for The measurement of approximate number system acuity across the lifespan is compromised by congruency effects

description: Supplemental material, CongandAge_Norris_et_al.2015 for The measurement of approximate number system acuity across the lifespan is compromised by congruency effects by Jade Eloise Norris, Sarah Clayton, Camilla Gilmore, Matthew Inglis and Julie Castronovo in Quarterly Journal of Experimental Psychology
DOI: 10.25384/sage.6814901.v1
title: Supplemental Material, 0._Replication - The Determinants of Religious Radicalization: Evidence from Kenya

description: Supplemental Material, 0._Replication for The Determinants of Religious Radicalization: Evidence from Kenya by Anselm Rink, and Kunaal Sharma in Journal of Conflict Resolution