cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3334/cdiac/otg.ndp077
title: Partial pressure (or fugacity) of carbon dioxide, dissolved inorganic carbon, temperature, salinity and other variables collected from discrete sample and profile observations using CTD, bottle and other instruments from the KNORR in the South Pacific Ocean and Tasman Sea from 1992-05-02 to 1992-07-30 (NCEI Accession 0115018)

description: This dataset includes chemical, discrete sample, physical and profile data collected from KNORR in the South Pacific Ocean and Tasman Sea from 1992-05-02 to 1992-07-30 and retrieved during cruise 316N138_3, 4 and 5. These data include CHLOROFLUOROCARBON-11 (CFC-11), CHLOROFLUOROCARBON-12 (CFC-12), DELTA CARBON-13, DELTA CARBON-14, DELTA HELIUM-3, DISSOLVED INORGANIC CARBON, DISSOLVED OXYGEN, HELIUM, HYDROSTATIC PRESSURE, NEON, NITRATE, NITRITE, PHOSPHATE, Partial pressure (or fugacity) of carbon dioxide, Potential temperature (theta), SALINITY, SILICATE, Tritium (Hydrogen isotope) and WATER TEMPERATURE. The instruments used to collect these data include CTD and bottle. These data were collected by Kenneth M. Johnson of Brookhaven National Laboratory (BNL) and Douglas W. R. Wallace of Dalhousie University; Institute of Oceanography as part of the WOCE_P06 dataset.

The World Ocean Circulation Experiment (WOCE) was a major component of the World Climate Research Program with the overall goal of better understanding the ocean's role in climate and climatic changes resulting from both natural and anthropogenic causes. The CO2 survey took advantage of the sampling opportunities provided by the WOCE Hydrographic Program (WHP) cruises during this period between 1990 and 1998. The final collection covers approximately 23,000 stations from 94 WOCE cruises.
DOI: 10.3334/cdiac/otg.09ar19980228
title: Dissolved inorganic carbon (DIC), total alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations during the R/V Aurora Australis cruise AA9706, WOCE_SR03_1998 (EXPOCODE 09AR19980228) in the Southern Ocean from 1998-02-28 to 1998-04-01 (NCEI Accession 0115154)

description: This dataset includes discrete profile measurements of dissolved inorganic carbon (DIC), total alkalinity, temperature, salinity, dissolved oxygen, nutrients and delta C13 obtained during the R/V Aurora Australis cruise AA9706, WOCE_SR03_1998 (EXPOCODE 09AR19980228) in the Southern Ocean from 1998-02-28 to 1998-04-01. These data were collected by Bronte Tilbrook of Commonwealth Scientific and Industrial Research Organization (CSIRO), Benjamin McNeil of UNSW, Climate Change Research Centre (CCRC), and Mark Rosenberg of University of Tasmania (UTAS) as part of the WOCE_SR03_1998 dataset. The World Ocean Circulation Experiment (WOCE) was a major component of the World Climate Research Program with the overall goal of better understanding the ocean's role in climate and climatic changes resulting from both natural and anthropogenic causes. The CO2 survey took advantage of the sampling opportunities provided by the WOCE Hydrographic Program (WHP) cruises during this period between 1990 and 1998. The final collection covers approximately 23,000 stations from 94 WOCE cruises.
DOI: 10.7910/dvn/jgdbtb
title: SMP: Raw Data

description: SMP raw data
DOI: 10.3334/cdiac/otg.vos_atlantic_companion_line_2006_2007
title: Partial pressure (or fugacity) of carbon dioxide, salinity and other variables collected from underway - surface observations using Barometric pressure sensor, Carbon dioxide (CO2) gas analyzer and other instruments from the Atlantic Companion in the Inner Sea - West Coast Scotland, Irish Sea and St. George's Channel and North Atlantic Ocean from 2006-06-11 to 2007-11-05 (NCEI Accession 0115226)

description: This dataset includes chemical, meteorological, physical and underway - surface data collected from Atlantic Companion in the Inner Sea - West Coast Scotland, Irish Sea and St. George's Channel and North Atlantic Ocean from 2006-06-11 to 2007-11-05 and retrieved during cruise 77CN20060611. These data include BAROMETRIC PRESSURE, CARBON DIOXIDE - AIR, Partial pressure (or fugacity) of carbon dioxide, SALINITY and SEA SURFACE TEMPERATURE. The instruments used to collect these data include Barometric pressure sensor, Carbon dioxide (CO2) gas analyzer, Shower head chamber equilibrator for autonomous carbon dioxide (CO2) measurement and thermosalinographs. These data were collected by Douglas W. R. Wallace of Dalhousie University; Institute of Oceanography and Arne Körtzinger and Tobias Steinhoff of GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany as part of the VOS_Atlantic_Companion_Line_2006_2007 dataset.
DOI: 10.48420/30687251
title: Spreadsheet index of named bookbinders in the Sotheby's auction catalogues for the sales of the Major John Roland Abbey collection, sold between 1965 and 1989

description: The spreadsheet was compiled from the 11 auction catalogues of the Major John Roland Abbey collection, which was sold at Sotheby’s in 11 portions, comprising over 3000 lots, between June 1965 and June 1989. This is believed to be the first attempt to produce an index of all eleven volumes, though several of the individual catalogues contain printed indices of their specific contents. All named binders and workshops have been included. In addition, the index contains the names of selected owners associated with the extant bindings, such as Jean Grolier, Jacques Auguste de Thou, and Thomas Wotton, as well as monarchs and popes by or for whom bindings were commissioned. However, no attempt has been made to create a unified index of all owners, due to the huge effort required. Information on binders has been supplemented by reference to Charles Ramsden’s three works: <i>French Bookbinders, 1789–1848</i> (1950); <i>Bookbinders of the United Kingdom (outside London), 1780–1840</i> (1954); and <i>London Bookbinders, 1780–1840</i> (1956). The author would be grateful for information on any errors or omissions.
DOI: 10.48420/30687251.v1
title: Spreadsheet index of named bookbinders in the Sotheby's auction catalogues for the sales of the Major John Roland Abbey collection, sold between 1965 and 1989

description: The spreadsheet was compiled from the 11 auction catalogues of the Major John Roland Abbey collection, which was sold at Sotheby’s in 11 portions, comprising over 3000 lots, between June 1965 and June 1989. This is believed to be the first attempt to produce an index of all eleven volumes, though several of the individual catalogues contain printed indices of their specific contents. All named binders and workshops have been included. In addition, the index contains the names of selected owners associated with the extant bindings, such as Jean Grolier, Jacques Auguste de Thou, and Thomas Wotton, as well as monarchs and popes by or for whom bindings were commissioned. However, no attempt has been made to create a unified index of all owners, due to the huge effort required. Information on binders has been supplemented by reference to Charles Ramsden’s three works: <i>French Bookbinders, 1789–1848</i> (1950); <i>Bookbinders of the United Kingdom (outside London), 1780–1840</i> (1954); and <i>London Bookbinders, 1780–1840</i> (1956). The author would be grateful for information on any errors or omissions.
DOI: 10.15468/dl.xj2xwc
title: Occurrence Download

description: A dataset containing 3012466 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Year is 1984"
 ]
}

 The dataset includes 3012466 records from 597 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007554-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.852vvn
title: Occurrence Download

description: A dataset listing the 406 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is The Atlas of Wintering Birds in Italy - AIRONE project (2010-2025)"
 ]
}

 The dataset's 406 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007575-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r853z2
title: Occurrence Download

description: A dataset containing 405 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((94.96626 5.92499,94.29736 4.90197,95.6745 3.80026,97.62217 2.12802,99.23538 -0.40985,102.08803 -4.61996,104.27178 -6.80371,105.8063 -6.23318,107.20312 -2.65262,105.23577 -0.7443,103.99635 0.49512,102.36346 1.28206,100.2584 3.13136,97.18935 5.96433,94.96626 5.92499))",
 "TaxonKey is Canarium"
 ]
}

 The dataset includes 405 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007584-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fx4xnr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Winteria telescopa Brauer, 1901",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((8.9648 19.8496,-0.0352 19.8496,-0.0352 10.8496,8.9648 10.8496,8.9648 19.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009926-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15555540
title: SolBench dataset
DOI: 10.5281/zenodo.15555541
title: SolBench dataset
DOI: 10.5281/zenodo.14841435
title: Data for: Searching for Low-Mass Exoplanets Amid Stellar Variability with a Fixed Effects Linear Model of Line-by-Line Shape Changes

description: The following repository contains the data used for the manuscript: "Searching for Low-Mass Exoplanets Amid Stellar Variability with a Fixed Effects Linear Model of Line-by-Line Shape Changes". Within line_property_files.zip there is file "line_property_files_README.md" that contains a description of each column of completeLines.csv.

The important columns of this csv are

date: time of observation

line_order: unique identifier of a line, a combination of that line's central wavelength and order ID

rv_template_0.5: the RV measure for a given line on a given day

fit_gauss_a,fit_gauss_b,fit_gauss_depth,fit_gauss_sigmasq,proj_hg_coeff_0,proj_hg_coeff_2,proj_hg_coeff_3,proj_hg_coeff_4,proj_hg_coeff_5,proj_hg_coeff_6,proj_hg_coeff_7,proj_hg_coeff_8,proj_hg_coeff_9,proj_hg_coeff_10: the shape-change covariates that we use to control for stellar activity

Below is a description of each of the data files

completeLines.csv: this csv file contains the time series of every line's shape measurements and RVs, it is used throughout the analysis.

line_property_files.zip: this directory contains .h5 files that contain all line-shape information and contaminated RVs for each line used in our analysis. The script clean_data.Rmd uses these as input and combines them all into a single csv file called completeLines.csv.

project_template_deriv_onto_gh.h5: this contains the projection vector described in the paper to produce the orthogonal HG coefficients. The script clean_data.Rmd uses this as input and combines them all into a single csv file called completeLines.csv.

models.zip: this directory contains the results from each model that was fit for our paper.
DOI: 10.5281/zenodo.14841436
title: Data for: Searching for Low-Mass Exoplanets Amid Stellar Variability with a Fixed Effects Linear Model of Line-by-Line Shape Changes

description: The following repository contains the data used for the manuscript: "Searching for Low-Mass Exoplanets Amid Stellar Variability with a Fixed Effects Linear Model of Line-by-Line Shape Changes". Within line_property_files.zip there is file "line_property_files_README.md" that contains a description of each column of completeLines.csv.

The important columns of this csv are

date: time of observation

line_order: unique identifier of a line, a combination of that line's central wavelength and order ID

rv_template_0.5: the RV measure for a given line on a given day

fit_gauss_a,fit_gauss_b,fit_gauss_depth,fit_gauss_sigmasq,proj_hg_coeff_0,proj_hg_coeff_2,proj_hg_coeff_3,proj_hg_coeff_4,proj_hg_coeff_5,proj_hg_coeff_6,proj_hg_coeff_7,proj_hg_coeff_8,proj_hg_coeff_9,proj_hg_coeff_10: the shape-change covariates that we use to control for stellar activity

Below is a description of each of the data files

completeLines.csv: this csv file contains the time series of every line's shape measurements and RVs, it is used throughout the analysis.

line_property_files.zip: this directory contains .h5 files that contain all line-shape information and contaminated RVs for each line used in our analysis. The script clean_data.Rmd uses these as input and combines them all into a single csv file called completeLines.csv.

project_template_deriv_onto_gh.h5: this contains the projection vector described in the paper to produce the orthogonal HG coefficients. The script clean_data.Rmd uses this as input and combines them all into a single csv file called completeLines.csv.

models.zip: this directory contains the results from each model that was fit for our paper.
DOI: 10.15485/1647040
title: Groundwater table elevation and temperature from 2015 to 2024 at the Lower Montane site in the East River Watershed, Colorado.

description: This groundwater level elevation and temperature data package is aimed at improving the predictive understanding of hydro-biogeochemical processes at the lower montane site in the East River Watershed, Colorado. The dataset is obtained using pressure transducers placed in shallow wells in the floodplain. This dataset contains data from wells with Location ID's ER-DOW (alias DO1West), ER-DOE (alias DO2East), ER-MBA1 (alias M1Bend1), ER-MBA2 (alias M1Bend2), ER-UPW (alias UP1West), ER-UPM (alias UP2), ER-UPE (alias UP3East). Another dataset contains the data from wells with Location ID's ER-CPA1 to ER-CPA6. Each file contains the water level elevation and the water temperature. Water level elevation has been obtained using the barometric pressure from the pressure transducer (Hobos sensor) in the well, barometric pressure from a sensor in air located at the same site (lower montane), depth from top-of-casing (TOC) to sensor measurement point, and TOC elevation. Data have been checked with a few measurements of water table depths. A real-time kinematic (RTK) global positioning system (GPS) has been used to survey the TOC (data in file Well_Location.csv). The water level elevation is given in UTM13N Geoid2012AB. While depth to water level is not present in the data files, it can be easily calculated with the TOC and distance to ground provided in the GPS coordinate file. The dataset quality is discussed in Collection/Analysis section of the methods. Time-series of measurements were initially added to the archive for the period 2015 to 2019, and later updated with time-series until 2024 (end of data collection). The dataset contains 8 *.csv data files, and 3 *.csv metadata files. Feel free to contact the author with any questions or collaboration interests. The publication year was updated from "2020" to "2025" to reflect the revised version of this dataset.
DOI: 10.15468/dl.cvv75n
title: Occurrence Download

description: A dataset containing 12542 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Austria",
 "OccurrenceStatus is Present",
 "TaxonKey is Salamandra salamandra (Linnaeus, 1758)"
 ]
}

 The dataset includes 12542 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016033-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15485/1647041
title: Groundwater table elevation and temperature from 2015 to 2024 across Meander C at the Lower Montane site in the East River Watershed, Colorado.

description: This groundwater level elevation and temperature data package is aimed at improving the predictive understanding of hydro-biogeochemical processes at the lower montane site in the East River Watershed, Colorado. The dataset is obtained using pressure transducers placed in shallow wells in the floodplain. This dataset contains data from wells ER-CPA1 to ER-CPA6. Another dataset contains the data from wells at nearby Locations. Each file contains the water level elevation and the water temperature. Water level elevation has been obtained using the barometric pressure from the pressure transducer (Hobos sensor) in the well, barometric pressure from a sensor in air located at the same site (lower montane), depth from top-of-casing (TOC) to sensor measurement point, and TOC elevation. Data have been checked with a few measurements of water table depths. A real-time kinematic (RTK) global positioning system (GPS) has been used to survey the TOC (data in file Well_Location.csv). The water level elevation is given in UTM13N Geoid2012AB. While depth to water level is not present in the data files, it can be easily calculated with the TOC and distance to ground provided in the GPS coordinate file. The dataset quality is discussed in Collection/Analysis section of the methods. Time-series of measurements were initially added to the archive for the period 2015 to 2019, and later updated with time-series until 2024 (end of data collection). The dataset contains 7 *.csv data files, and 3 *.csv metadata files. Feel free to contact the author with any questions or collaboration interests. The publication year was updated from "2020" to "2025" to reflect the revised version of this dataset.
DOI: 10.15468/252pjn
title: Julus bengeli sp. nov., a new millipede from the Altais, Siberia, Russia, showing strong sexual dimorphism in the gnathochilarium (Diplopoda: Julida: Julidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Nefediev, Pavel S., Nefedieva, Julia S. (2025): Julus bengeli sp. nov., a new millipede from the Altais, Siberia, Russia, showing strong sexual dimorphism in the gnathochilarium (Diplopoda: Julida: Julidae). Zootaxa 5723 (1): 105-116, DOI: 10.11646/zootaxa.5723.1.5, URL: https://doi.org/10.11646/zootaxa.5723.1.5AbstractJulus bengeli sp. nov. is described and illustrated from the Russian Altais, southwestern Siberia, Asian Russia. The new species shows a strong sexual dimorphism in the gnathochilarium in males, viz. a distinct projection located parabasally on the gnathochilarial stipes, apically carrying a circular bundle of 15–17 elongated papillae/trichomes. Julus bengeli sp. nov. seems to be especially close to J. ghilarovi Gulička, 1963, but differs from it by the presence of a conical apical outgrowth of the telopodite 1 of leg pair 1, and a large anterior coxal outgrowths of leg pair 2 thickened in the central part. The distributions of all Julus species of the Russian Altais are mapped, and a key to species of the genus in the study area is given.
DOI: 10.5061/dryad.h21rs23
title: Data from: Comprehensive transcriptome analysis reveals genes potentially involved in isoflavone biosynthesis in Pueraria thomsonii Benth

description: Pueraria thomsonii Benth is an important medicinal plant. Transcriptome
 sequencing, unigene assembly, the annotation of transcripts and the study
 of gene expression profiles play vital roles in gene function research.
 However, the full-length transcriptome of P. thomsonii remains unknown.
 Here, we obtained 44,339 nonredundant transcripts of P. thomsonii by using
 the PacBio RS II Isoform and Illumina sequencing platforms, of which
 43,195 were annotated genes. Compared with the expression levels in the
 plant roots, those of transcripts with a |fold change| ≥ 4 and FDR
 &lt; 0.01 in the leaves or stems were assigned as differentially
 expressed transcripts (DETs). In total, we found 9,225 DETs, 32 of which
 came from structural genes that were potentially involved in isoflavone
 biosynthesis. The expression profiles of 8 structural genes from the
 RNA-Seq data were validated by qRT-PCR. We identified 437 transcription
 factors (TFs) that were positively or negatively correlated with at least
 1 of the structural genes involved in isoflavone biosynthesis using
 Pearson correlation coefficients (r) (r &gt; 0.8 or r &lt; -0.8).
 We also identified a total of 32 microRNAs (miRNAs), which targeted 805
 transcripts. These miRNAs caused enriched function in ‘ATP binding’,
 ‘defense response’, ‘ADP binding’, and ‘signal transduction’.
 Interestingly, MIR156a potentially promoted isoflavone biosynthesis by
 repressing SBP, and MIR319 promoted isoflavone biosynthesis by repressing
 TCP and HB-HD-ZIP. Finally, we identified 2,690 alternative splicing
 events, including that of the structural genes of trans-cinnamate
 4-monooxygenase and pullulanase, which are potentially involved in the
 biosynthesis of isoflavone and starch, respectively, and of three TFs
 potentially involved in isoflavone biosynthesis. Together, these results
 provide us with comprehensive insight into the gene expression and
 regulation of P. thomsonii.
description: UN AND
 PB
DOI: 10.5281/zenodo.18391494
title: February 8, 2025 (v1) Dataset Open Dataset used for paper "Face-centered cubic carbon as a fourth basic carbon allotrope with properties of intrinsic semiconductors and ultra-wide bandgap" (https://doi.org/10.1038/s43246-024-00547-8)
DOI: 10.5281/zenodo.18391495
title: February 8, 2025 (v1) Dataset Open Dataset used for paper "Face-centered cubic carbon as a fourth basic carbon allotrope with properties of intrinsic semiconductors and ultra-wide bandgap" (https://doi.org/10.1038/s43246-024-00547-8)