cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25071203
title: Maskrey et al. 2024 (data and code)

description: Data associated with the paper "Differential metabolic responses in bold and shy sea anemones during a simulated heatwave"
DOI: 10.6084/m9.figshare.25071203.v1
title: Maskrey et al. 2024 (data and code)

description: Data associated with the paper "Differential metabolic responses in bold and shy sea anemones during a simulated heatwave"
DOI: 10.5281/zenodo.10554642
title: Myocardial extracellular volume assessment at CT in hospitalized COVID-19 patients with regards to pulmonary embolism

description: Monti CB, Zanardo M, Capra D, Folco G, Silletta F, Secchi F, Sardanelli F. Myocardial extracellular volume assessment at CT in hospitalized COVID-19 patients with regards to pulmonary embolism. Eur J Radiol. 2023 Jun;163:110809. doi: 10.1016/j.ejrad.2023.110809. Epub 2023 Apr 7. PMID: 37062205; PMCID: PMC10079318.

Abstract



Purpose: To evaluate myocardial status through the assessment of extracellular volume (ECV) calculated at computed tomography (CT) in patients hospitalized for novel coronavirus disease (COVID-19), with regards to the presence of pulmonary embolism (PE) as a risk factor for cardiac dysfunction.

Method: Hospitalized patients with COVID-19 who underwent contrast-enhanced CT at our institution were retrospectively included in this study and grouped with regards to the presence of PE. Unenhanced and portal venous phase scans were used to calculate ECV by placing regions of interest in the myocardial septum and left ventricular blood pool. ECV values were compared between patients with and without PE, and correlations between ECV values and clinical or technical variables were subsequently appraised.

Results: Ninety-four patients were included, 63/94 of whom males (67%), with a median age of 70 (IQR 56-76 years); 28/94 (30%) patients presented with PE. Patients with PE had a higher myocardial ECV than those without (33.5%, IQR 29.4-37.5% versus 29.8%, IQR 25.1-34.0%; p = 0.010). There were no correlations between ECV and patients' age (p = 0.870) or sex (p = 0.122), unenhanced scan voltage (p = 0.822), portal phase scan voltage (p = 0.631), overall radiation dose (p = 0.569), portal phase scan timing (p = 0.460), and contrast agent dose (p = 0.563).

Conclusions: CT-derived ECV could help identify COVID-19 patients at higher risk of cardiac dysfunction, especially when related to PE, to potentially plan a dedicated, patient-tailored clinical approach.
DOI: 10.5281/zenodo.10554643
title: Myocardial extracellular volume assessment at CT in hospitalized COVID-19 patients with regards to pulmonary embolism

description: Monti CB, Zanardo M, Capra D, Folco G, Silletta F, Secchi F, Sardanelli F. Myocardial extracellular volume assessment at CT in hospitalized COVID-19 patients with regards to pulmonary embolism. Eur J Radiol. 2023 Jun;163:110809. doi: 10.1016/j.ejrad.2023.110809. Epub 2023 Apr 7. PMID: 37062205; PMCID: PMC10079318.

Abstract



Purpose: To evaluate myocardial status through the assessment of extracellular volume (ECV) calculated at computed tomography (CT) in patients hospitalized for novel coronavirus disease (COVID-19), with regards to the presence of pulmonary embolism (PE) as a risk factor for cardiac dysfunction.

Method: Hospitalized patients with COVID-19 who underwent contrast-enhanced CT at our institution were retrospectively included in this study and grouped with regards to the presence of PE. Unenhanced and portal venous phase scans were used to calculate ECV by placing regions of interest in the myocardial septum and left ventricular blood pool. ECV values were compared between patients with and without PE, and correlations between ECV values and clinical or technical variables were subsequently appraised.

Results: Ninety-four patients were included, 63/94 of whom males (67%), with a median age of 70 (IQR 56-76 years); 28/94 (30%) patients presented with PE. Patients with PE had a higher myocardial ECV than those without (33.5%, IQR 29.4-37.5% versus 29.8%, IQR 25.1-34.0%; p = 0.010). There were no correlations between ECV and patients' age (p = 0.870) or sex (p = 0.122), unenhanced scan voltage (p = 0.822), portal phase scan voltage (p = 0.631), overall radiation dose (p = 0.569), portal phase scan timing (p = 0.460), and contrast agent dose (p = 0.563).

Conclusions: CT-derived ECV could help identify COVID-19 patients at higher risk of cardiac dysfunction, especially when related to PE, to potentially plan a dedicated, patient-tailored clinical approach.
DOI: 10.5281/zenodo.10570780
title: YUTO MMS Dataset, Sequence D, Images, Part1
DOI: 10.5281/zenodo.10570781
title: YUTO MMS Dataset, Sequence D, Images, Part1
DOI: 10.5281/zenodo.10554625
title: The predictive role of right ventricular late gadolinium enhancement in patients with tetralogy of Fallot undergoing pulmonary valve replacement

description: Monti CB, Zanardo M, Capra D, Lastella G, Guarnieri G, Giambersio E, Pasqualin G, Sardanelli F, Secchi F. The predictive role of right ventricular late gadolinium enhancement in patients with tetralogy of Fallot undergoing pulmonary valve replacement. Eur Radiol Exp. 2023 Feb 24;7(1):9. doi: 10.1186/s41747-023-00322-3. PMID: 36826698; PMCID: PMC9958209. 

Abstract



Background: Our purpose was to evaluate the correlations between right ventricular (RV) late gadolinium enhancement (LGE) at cardiac magnetic resonance (CMR) in patients with tetralogy of Fallot (ToF) scheduled for pulmonary valve replacement (PVR) and post-PVR functional data.

Methods: We retrospectively reviewed ToF patients scheduled for PVR who underwent two CMR examinations at our institution, one before the procedure (CMR-0), including contrast-enhanced sequences, and one after the procedure (CMR-1). Functional left and RV data were obtained by segmenting short-axis stacks on both CMR examinations, and normalised variations were calculated by dividing differences between CMR-1 and CMR-0 by the intercurring time interval, whereas the RV scar burden was assessed on CMR-0 LGE sequences both semiquantitatively and quantitatively. Data were reported as median and interquartile range, differences were appraised with the Mann-Whitney U test, while correlations were assessed with Spearman's ρ.

Results: Fifteen patients with a median age of 25 years (16-29), including 9 (60%) males, with a median time interval between CMR-0 and CMR-1 of 17 months (12-23), were retrospectively reviewed. The semiquantitative LGE score at CMR-0 was 7 (6-9), and LGE volume was 4.49 mL (3.70-5.78), covering 5.63% (4.92-7.00) of the RV. RV LGE score showed a moderate positive correlation with the normalised variation of RV stroke volume (ρ = 0.662, p = 0.007) and a borderline moderate positive correlation with the normalised variation of RV end-diastolic indexed volume (ρ = 0.513, p = 0.050).

Conclusions: The assessment of RV LGE before PVR may provide insights on post-PVR functional data, potentially facilitating a patient-tailored treatment pathway.
DOI: 10.5281/zenodo.10554626
title: The predictive role of right ventricular late gadolinium enhancement in patients with tetralogy of Fallot undergoing pulmonary valve replacement

description: Monti CB, Zanardo M, Capra D, Lastella G, Guarnieri G, Giambersio E, Pasqualin G, Sardanelli F, Secchi F. The predictive role of right ventricular late gadolinium enhancement in patients with tetralogy of Fallot undergoing pulmonary valve replacement. Eur Radiol Exp. 2023 Feb 24;7(1):9. doi: 10.1186/s41747-023-00322-3. PMID: 36826698; PMCID: PMC9958209. 

Abstract



Background: Our purpose was to evaluate the correlations between right ventricular (RV) late gadolinium enhancement (LGE) at cardiac magnetic resonance (CMR) in patients with tetralogy of Fallot (ToF) scheduled for pulmonary valve replacement (PVR) and post-PVR functional data.

Methods: We retrospectively reviewed ToF patients scheduled for PVR who underwent two CMR examinations at our institution, one before the procedure (CMR-0), including contrast-enhanced sequences, and one after the procedure (CMR-1). Functional left and RV data were obtained by segmenting short-axis stacks on both CMR examinations, and normalised variations were calculated by dividing differences between CMR-1 and CMR-0 by the intercurring time interval, whereas the RV scar burden was assessed on CMR-0 LGE sequences both semiquantitatively and quantitatively. Data were reported as median and interquartile range, differences were appraised with the Mann-Whitney U test, while correlations were assessed with Spearman's ρ.

Results: Fifteen patients with a median age of 25 years (16-29), including 9 (60%) males, with a median time interval between CMR-0 and CMR-1 of 17 months (12-23), were retrospectively reviewed. The semiquantitative LGE score at CMR-0 was 7 (6-9), and LGE volume was 4.49 mL (3.70-5.78), covering 5.63% (4.92-7.00) of the RV. RV LGE score showed a moderate positive correlation with the normalised variation of RV stroke volume (ρ = 0.662, p = 0.007) and a borderline moderate positive correlation with the normalised variation of RV end-diastolic indexed volume (ρ = 0.513, p = 0.050).

Conclusions: The assessment of RV LGE before PVR may provide insights on post-PVR functional data, potentially facilitating a patient-tailored treatment pathway.
DOI: 10.5281/zenodo.10571524
title: Data from: "Using DNA metabarcoding to separate natural and human provided food in wild boar diet at the northern distribution range of Europe"

description: Data for

"Using DNA metabarcoding to separate natural and human provided food in wild boar diet at the northern distribution range of Europe"

Accepted for publication in Wildlife Biology
DOI: 10.5281/zenodo.10571525
title: Data from: "Using DNA metabarcoding to separate natural and human provided food in wild boar diet at the northern distribution range of Europe"

description: Data for

"Using DNA metabarcoding to separate natural and human provided food in wild boar diet at the northern distribution range of Europe"

Accepted for publication in Wildlife Biology
DOI: 10.5281/zenodo.10556298
title: Data for project "Cracks in the painting Konstnärsförbundets Styrelse", RAÄ-2021-3125

description: Data from the project "Cracks in the painting Konstnärsförbundets Styrelse" (Diarienummer RAÄ-2021-3125) including files for sample descriptions. Data from the following analytical techniques is included:



Scanning electron microscopy with energy dispersive x-ray spectroscopy (SEM-EDS);

 X-ray fluorescence spectroscopy (XRF);

 X-ray imaging;

Technical photography; 

Microscopy.


Instrument reports including technical specifications of each instrument as well as a sampling protocol can be found under DOI 10.5281/zenodo.10560902. All data was collected as part of the bachelor thesis "Sprickorna i Konstnärsförbundets styrelse" by Helena Berg, Department for Conservation, University of Gothenburg (https://hdl.handle.net/2077/72659).
DOI: 10.5281/zenodo.10556299
title: Data for project "Cracks in the painting Konstnärsförbundets Styrelse", RAÄ-2021-3125

description: Data from the project "Cracks in the painting Konstnärsförbundets Styrelse" (Diarienummer RAÄ-2021-3125) including files for sample descriptions. Data from the following analytical techniques is included:



Scanning electron microscopy with energy dispersive x-ray spectroscopy (SEM-EDS);

 X-ray fluorescence spectroscopy (XRF);

 X-ray imaging;

Technical photography; 

Microscopy.


Instrument reports including technical specifications of each instrument as well as a sampling protocol can be found under DOI 10.5281/zenodo.10560902. All data was collected as part of the bachelor thesis "Sprickorna i Konstnärsförbundets styrelse" by Helena Berg, Department for Conservation, University of Gothenburg (https://hdl.handle.net/2077/72659).
DOI: 10.34740/kaggle/dsv/7485710
title: 2021 World Population (updated daily)
DOI: 10.5281/zenodo.10572074
title: Supplementary Material for "Automated Detection of AI-Obfuscated Plagiarism in Modeling Assignments"

description: This repository contains additional material supporting the paper titled "Automated Detection of AI-Obfuscated Plagiarism in Modeling Assignments", presented at ICSE 2024 (SEET track).

The paper presents a token-based approach for detecting modeling plagiarism. It leverages a novel normalization technique to achieve resilience against common obfuscation attacks.

The approach was also integrated into the software plagiarism detector JPlag, thus providing a widely accessible solution.

Contents Overview:



Source Code: The implementation of our approach (contribution 1) based on the software plagiarism detector JPlag (v4.0.0). Note that JPlag is licensed under the GPL-3.0 license.

ChatGPT Study: An exploration of how ChatGPT can be exploited for cheating in modeling assignments.

Datasets: The three datasets of our evaluation based on EMF modeling assignments.

Raw Results: All raw data of our evaluation results, as used in our plots and tables.

Demo: A packaged JAR of our approach's implementation alongside an instruction on how to use it.
DOI: 10.5281/zenodo.10442139
title: Supplementary Material for "Automated Detection of AI-Obfuscated Plagiarism in Modeling Assignments"

description: This repository contains additional material supporting the paper titled "Automated Detection of AI-Obfuscated Plagiarism in Modeling Assignments", presented at ICSE 2024 (SEET track).

The paper presents a token-based approach for detecting modeling plagiarism. It leverages a novel normalization technique to achieve resilience against common obfuscation attacks.

The approach was also integrated into the software plagiarism detector JPlag, thus providing a widely accessible solution.

Contents Overview:



Source Code: The implementation of our approach (contribution 1) based on the software plagiarism detector JPlag (v4.0.0). Note that JPlag is licensed under the GPL-3.0 license.

ChatGPT Study: An exploration of how ChatGPT can be exploited for cheating in modeling assignments.

Datasets: The three datasets of our evaluation based on EMF modeling assignments.

Raw Results: All raw data of our evaluation results, as used in our plots and tables.

Demo: A packaged JAR of our approach's implementation alongside an instruction on how to use it.
DOI: 10.5281/zenodo.10442140
title: Supplementary Material for "Automated Detection of AI-Obfuscated Plagiarism in Modeling Assignments"

description: This repository contains additional material supporting the paper titled "Automated Detection of AI-Obfuscated Plagiarism in Modeling Assignments", presented at ICSE 2024 (SEET track).

The paper presents a token-based approach for detecting modeling plagiarism. It leverages a novel normalization technique to achieve resilience against common obfuscation attacks.

The approach was also integrated into the software plagiarism detector JPlag, thus providing a widely accessible solution.

Contents Overview:



Source Code: The implementation of our approach (contribution 1) based on the software plagiarism detector JPlag (v4.0.0). Note that JPlag is licensed under the GPL-3.0 license.

ChatGPT Study: An exploration of how ChatGPT can be exploited for cheating in modeling assignments.

Datasets: The three datasets of our evaluation based on EMF modeling assignments.

Raw Results: All raw data of our evaluation results, as used in our plots and tables.

Demo: A packaged JAR of our approach's implementation alongside an instruction on how to use it.
DOI: 10.5281/zenodo.10174168
title: Internal tides vertical structure and steric sea surface height signature south of New Caledonia revealed by glider observations

description: Data to reproduce the figures of the preprint Internal tides vertical structure and steric sea surface height signature south of New Caledonia revealed by glider observations, submitted to Ocean Science
DOI: 10.6084/m9.figshare.7262138
title: fastsimcoal2 population models for Pelecanoides garnotii

description: Input files for fastsimcoal2 simulation-based reconstruction of population history in Pelecanoides garnotii<br>
DOI: 10.6084/m9.figshare.7262138.v1
title: fastsimcoal2 population models for Pelecanoides garnotii

description: Input files for fastsimcoal2 simulation-based reconstruction of population history in Pelecanoides garnotii<br>
DOI: 10.34740/kaggle/dsv/7485744
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.18712/nsd-nsd3161-v2
title: Level of Living Survey on Working Conditions 2022

description: Statistics Norway has carried out level of living surveys since 1973, and from 1996 surveys have been carried out annually. The Level of Living Survey on the topic of working conditions had previously been carried out in 1996, 2000, 2003, 2006, 2009, 2013, 2016 and 2019. The Level of Living Survey on Working Conditions aims to map different working environment conditions among employees in Norway. The survey now takes place every 3 years, and covers topics such as attachment to the workplace, physical, chemical and ergonomic working environment, psychosocial working environment, work-related health problems and sickness absence and requirements and opportunities for self-determination at work.

For the Level of Living Survey on Working Conditions 2022, a nationally representative sample of approximately 35 000 people aged 18-66 was drawn. Data was collected using telephone interviews and a self-administered web form in the period August 2022 to April 2023. In Statistics Norway, the Division for income and living conditions statistics has the professional responsibility for the survey, the data collection is carried out by the Division for personal surveys.
DOI: 10.25345/c5k931h7j
title: MassIVE MSV000093928 - Acetamiprid effect on queens and emerging bees
title: We continuously exposed honey bee colonies to sublethal acetamiprid doses (20 ug/L) under isolated conditions. After one month of exposure, the emerging bees and queens were collected and analyzed via high-throughput proteomics. The following treatment groups were established: i) a control without acetamiprid and ii) an acetamiprid-exposed group, in which the sugar solution was supplemented with acetamiprid to a final concentration of 20 ug/L. Six emerging bees were analyzed per colony. Each queen homogenate was processed three times for proteomic analysis. The data were acquired using the Data Independent Acquisition (DIA) method with an MS1 scan covering the range 390-1000 m/z at 120 K resolution (at 200 m/z), and the AGC target was set to 250%. and maximum injection time in Auto mode. DIA windows covered the range 390-1000 m/z in a total of 19 scans with 1 Da overlap and variable window width , Orbitrap resolution set to 30000, AGC target set to 1000% and maximum injection time in auto mode. Fragmentation was performed by HCD with a normalized collision energy of 30.
DOI: 10.23649/jae.2024.41.11.2
title: Сравнительная характеристика исследуемых городов

description: Journal of Agriculture and Environment, Выпуск 1 (41) 2024
DOI: 10.23649/jae.2024.41.11.4
title: Сводные значения вегетационного индекса NDVI за 2013-2022 годы

description: Journal of Agriculture and Environment, Выпуск 1 (41) 2024
DOI: 10.6084/m9.figshare.25071635.v1
title: nofield_model.nc

description: Base model for the analysis of LaLiga 2022-2023 results.
DOI: 10.6084/m9.figshare.25071635
title: nofield_model.nc

description: Base model for the analysis of LaLiga 2022-2023 results.
DOI: 10.5281/zenodo.7561950
title: Comparing the performance of two camera trap-based methods to survey small mustelids

description: Dataset of weasel detections by the external camera-trap (CT#) and the Mostela box (Mostela#) for both study areas (CL and HRA), used to fit multi-scale occupancy models in JAGS. The dataset also includes relevant covariates, namely: ranking of tree, shrub and herbaceous cover (3- high, 2-medium, 1-low cover); small mammal trapping rate from events detected inside the Mostelas (also in log scale).
DOI: 10.5281/zenodo.7561951
title: Comparing the performance of two camera trap-based methods to survey small mustelids

description: Dataset of weasel detections by the external camera-trap (CT#) and the Mostela box (Mostela#) for both study areas (CL and HRA), used to fit multi-scale occupancy models in JAGS. The dataset also includes relevant covariates, namely: ranking of tree, shrub and herbaceous cover (3- high, 2-medium, 1-low cover); small mammal trapping rate from events detected inside the Mostelas (also in log scale).
DOI: 10.6084/m9.figshare.25071626
title: base_model.nc

description: Base model for the analysis of LaLiga 2022-2023 results.
DOI: 10.6084/m9.figshare.25071626.v1
title: base_model.nc

description: Base model for the analysis of LaLiga 2022-2023 results.
DOI: 10.5281/zenodo.10572148
title: 3D ED/MicroED data of zeolite STW FIB-milled lamellae

description: 3D ED/MicroED data of zeolite STW lamellae FIB-milled to different thicknesses: 100 nm, 130 nm, 210 nm and 350 nm.
DOI: 10.5281/zenodo.10551381
title: Safe Follow-Up after Endovascular Aortic Repair with Unenhanced MRI: The SAFEVAR Study

description: Secchi F, Capra D, Monti CB, Mobini N, Ortiz MDMG, Trimarchi S, Mazzaccaro D, Righini P, Nano G, Sardanelli F. Safe Follow-Up after Endovascular Aortic Repair with Unenhanced MRI: The SAFEVAR Study. Diagnostics (Basel). 2022 Dec 21;13(1):20. doi: 10.3390/diagnostics13010020. PMID: 36611311; PMCID: PMC9818075.

We aimed to investigate whether unenhanced magnetic resonance imaging (MRI) could represent a safe and highly sensitive tool for endoleak screening in patients treated with endovascular aneurysm repair (EVAR) using computed tomography angiography (CTA) as a reference standard. Patients who underwent CTA for EVAR follow-up at our institution were prospectively enrolled. All MRI examinations were performed with a 1.5 T unit. The true-FISP and HASTE sequences of the MRI scans were assessed for the presence of hyperintensity within the aneurysm sac outside the graft, whereas phase-contrast through-plane sequences were used for blood flow quantification. We included 45 patients, 5 (11%) of whom were female. The median age was 73 years (IQR 68−78 years). Among our patients, 19 (42%) were positive for endoleaks at CTA, of whom 13 (68%) had type II endoleaks and 6 (32%) had type I endoleaks. There were no significant differences in age, sex, aneurysm type, prosthesis type, or contrast-to-noise ratio between hyperintensity and thrombus between patients with and without endoleaks (p > 0.300). The combined evaluation of true-FISP and HASTE yielded 100% sensitivity (95% CI: 79−100%) and 19% specificity (95% CI: 7−40%). Patients with a positive CTA had a median thrombus flow of 0.06 L/min (IQR 0.03−0.23 L/min), significantly greater than that of patients with a negative CTA (p = 0.007). Setting a threshold at 0.01 L/min, our MRI protocol yielded 100% sensitivity, 56% specificity, and an AUC of 0.76 (95% CI 0.60−0.91). In conclusion, unenhanced MRI has perfect sensitivity for endoleak detection, although with subpar specificity that could be improved with phase-contrast flow analysis.