cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.35078/c32scp/rhearp
title: Separata dos Cadernos - da Reforma e de Narrativas.pdf

description: A separata apresenta uma seleção de imagens e histórias breves compiladas nos ebooks multimídia “Cadernos da Reforma: Memórias da Saúde Mental brasileira” e “Cadernos de Narrativas: Tecendo a liberdade a céu aberto”. Ambos são produtos de encontros e entrevistas com pessoas diretamente envolvidas na Reforma Psiquiátrica brasileira e que por meio de testemunhos nos ajudam a entender as concepções, ideias e processos de transformação do cuidado em Saúde Mental.

Com "Cadernos da Reforma" inaugura-se a apresentação do fundo documental “sujeitos históricos” com os formuladores/idealizadores e representantes de movimentos sociais da Reforma. Para a separata, antecipamos um extrato da entrevista com Alfredo Schechtman, realizada em 13 de julho de 2017. 

Em "Cadernos de Narrativas" apresentamos três usuários, como cantantes da própria existência fora dos hospitais psiquiátricos e autores da própria vida. Assim, reflete-se sobre os sentidos de liberdade e autonomia com os usuários de Saúde Mental de três municípios do sudeste brasileiro – Paracambi (RJ), Barbacena (MG) e Juiz de Fora (MG) – que, a partir dos anos 2000, passaram por intervenções do Ministério da Saúde para o fechamento dos leitos psiquiátricos e consolidação da rede substitutiva de cuidado.


Créditos Separata Cadernos da Reforma e Cadernos de Narrativas

Realização 
Núcleo de Saúde Mental, Álcool e outras Drogas da Fiocruz Brasília e TV Pinel

Editoras
Fernanda Severo e Bárbara Anaissi

Curadoria e colaboração editorial
Ana Szapiro, André Guerrero, June Correa Borges Scafuto, João Aranha, Vera Lúcia Carrilho Roçado, Yuri Prado

Textos
Fernanda Severo e Bárbara Anaissi 

Projeto gráfico e diagramação
Substância 4 | Marcia Albuquerque

Capa e colagens
Maurício Planel

Fotos
Capa © Radilson Carlos Gomes e Marcelo Valle; folha de rosto ©Radilson Carlos Gomes; p.2 ©Nathalia Gameiro; p.7 ©João Aranha; p.8 (Still) ©Yuri Prado; p.12 ©Vera Roçado; p. 16 ©Radilson Carlos Gomes
DOI: 10.35078/c32scp/nd6gqh
title: Websérie- Retratos da Reforma Psiquiátrica Brasileira – Episódio 3.mp4

description: A websérie Retratos da Reforma Psiquiátrica Brasileira é a primeira peça da Instalação Multimídia Morar em Liberdade, 2020-21 e parte da nossa resistência pelo direito à cidade e à comunicação. | Direção e roteiro: Fernanda Severo, João Aranha e Vera Roçado | Direção de fotografia: João Aranha | Produção: Vera Roçado, João Aranha, Fernanda Severo e Radilson Carlos Gomes | Captação de imagem e som direto, edição e finalização: João Aranha | Trilha Sonora: Cláudio Camillo | Música abertura: Bensound - Once Again | Fotografia: Radilson Carlos Gomes, Marcelo Valle e Vera Roçado | Entrevistadora: Vera Roçado | Entrevistados: Adelino Rodrigues, Nilta Chaves e Rosaline Oliveira | Poema: Sangue Coagulado no Chão - Altair Pinheiro | Agradecimentos: Secretarias Municipais de Saúde de Barbacena/MG, Uusários e trabalhadores da Rede de Atenção Psicossocial de Barbacena/MG | Agradecimento especial: Adelino Rodrigues, Nilta Chaves, Rosalina Oliveira e Ana Amstalden | Coordenação do Núcleo de Saúde Mental, Álcool e Outras Drogas da Fiocruz Brasília - NUSMAD: André Vinicius Pires Guerrero | Coordenação de Pesquisa história e Comunicação Pública: Fernanda Severo
DOI: 10.35078/c32scp/8ijcsa
title: Websérie- Retratos da Reforma Psiquiátrica Brasileira – Episódio 2.mp4

description: A websérie Retratos da Reforma Psiquiátrica Brasileira é a primeira peça da Instalação Multimídia Morar em Liberdade, 2020-21 e parte da nossa resistência pelo direito à cidade e à comunicação. | Direção e roteiro: Fernanda Severo, João Aranha e Vera Roçado | Direção de fotografia: João Aranha | Produção: Vera Roçado, João Aranha, Fernanda Severo e Oliesia Esteve | Captação de imagem e som direto, edição e finalização: João Aranha | Trilha Sonora: Cláudio Camillo | Música abertura: Bensound - Once Again | Poema: Caos Humano - Altair Pinheiro | Fotografia: Radilson Carlos Gomes e Vera Roçado | Entrevistadora: Vera Roçado | Entrevistados: Zélia Calazans, Maria de Nazaré, Andreia Cerqueira e Oscar Paixão | Agradecimentos: Secretarias Municipais de Saúde de Paracambi/RJ, Uusários e trabalhadores da Rede de Atenção Psicossocial de Paracambi/RJ e Oliesia Esteves | Agradecimento especial: Zélia Calazans, Maria de Nazaré, Andreia Cerqueira e Oscar Paixão | Coordenação do Núcleo de Saúde Mental, Álcool e Outras Drogas da Fiocruz Brasília - NUSMAD: André Vinicius Pires Guerrero | Coordenação de Pesquisa história e Comunicação Pública: Fernanda Severo
DOI: 10.6084/m9.figshare.14037302
title: Additional file 3 of Genetic diversity analysis of brown marmorated stink bug, Halyomorpha halys based on mitochondrial COI and COII haplotypes

description: Additional file 3. FST values of all the BMSB populations.
DOI: 10.6084/m9.figshare.14037299
title: Additional file 2 of Genetic diversity analysis of brown marmorated stink bug, Halyomorpha halys based on mitochondrial COI and COII haplotypes

description: Additional file 2. Haplotype information of the BMSB populations.
DOI: 10.6084/m9.figshare.14037299.v1
title: Additional file 2 of Genetic diversity analysis of brown marmorated stink bug, Halyomorpha halys based on mitochondrial COI and COII haplotypes

description: Additional file 2. Haplotype information of the BMSB populations.
DOI: 10.6084/m9.figshare.14037302.v1
title: Additional file 3 of Genetic diversity analysis of brown marmorated stink bug, Halyomorpha halys based on mitochondrial COI and COII haplotypes

description: Additional file 3. FST values of all the BMSB populations.
DOI: 10.6084/m9.figshare.7057010
title: MOESM12 of Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times

description: Additional file 12: Table S6. Addition statistics for the metagenome assemblies and bins.
DOI: 10.11583/dtu.23659524.v1
title: <strong>RumexLeaves: Dataset introduced by Paper "Fine-grained Leaf Analysis for Efficient Weeding Robots"</strong>

description: RumexLeaves is a image dataset with fine-grained annotation of Rumex obtusifolius weeds. For each indivudal leaf, we provide a pixel-level segmentation mask as well as a keypoint-guided polyline along stem and major vein of the leaf. The dataset includes 809 images with 7747 annotations, while it is differntiated between two types of datapoints: (1) iNaturalist datapoints have been downloaded from the plant publisher iNaturalist and (2) RoboRumex that have been collected with a Husky Robot platform. The following table gives an overview of the dataset.
<br>
|                | Total | iNaturalist | RoboRumex |<br>
|----------------|-------|-------------|-----------|<br>
| # Images         | 809     | 690           | 119         |<br>
| # Leaves w stem  | 3460     | 3250           | 210         |<br>
| # Leaves wo stem | 4287     | 3916           | 371         |<br>
<br>
DOI: 10.6084/m9.figshare.7194293.v1
title: MOESM10 of New insights into long noncoding RNAs and pseudogenes in prognosis of renal cell carcinoma

description: Additional file 10: Table S9. Â Expressions of LncRNAs and pseudogenes with intact clinical data.
DOI: 10.6084/m9.figshare.14526557
title: Additional file 1 of Blocking the interaction between interleukin-17A and endoplasmic reticulum stress in macrophage attenuates retinal neovascularization in oxygen-induced retinopathy

description: Additional file 1. mRNA expression, endothelial proliferation and tube formation and ERG in different groups, as well as the proposed pathway scheme.
DOI: 10.6084/m9.figshare.14526557.v1
title: Additional file 1 of Blocking the interaction between interleukin-17A and endoplasmic reticulum stress in macrophage attenuates retinal neovascularization in oxygen-induced retinopathy

description: Additional file 1. mRNA expression, endothelial proliferation and tube formation and ERG in different groups, as well as the proposed pathway scheme.
DOI: 10.6084/m9.figshare.7194374.v1
title: MOESM2 of New insights into long noncoding RNAs and pseudogenes in prognosis of renal cell carcinoma

description: Additional file 2: Table S1. Â All approved LncRNAs from HGNC.
DOI: 10.6084/m9.figshare.7194428
title: MOESM6 of New insights into long noncoding RNAs and pseudogenes in prognosis of renal cell carcinoma

description: Additional file 6: Table S5. Â Expression alterations of LncRNAs in all cases with mRNA data.
DOI: 10.6084/m9.figshare.14526563.v1
title: Additional file 1 of Not BCL2 mutation but dominant mutation conversation contributed to acquired venetoclax resistance in acute myeloid leukemia

description: Additional file 1: Table S1. Differences in the mutational landscape between patients with VEN-I and VEN-R AML.
DOI: 10.6084/m9.figshare.7186790
title: Effect of Temperature on Devulcanization of Waste Sidewall Rubber by Supercritical Ethanol

description: The influence of temperature on devulcanization of waste sidewall rubber via supercritical ethanol was investigated. The effect of parameters on devulcanizing process was analyzed by a full factorial experimental design. The devulcanized products at different temperatures were characterized by gel permeation chromatography (GPC), differential scanning calorimetry (DSC), thermogravimetry and derivative thermogravimetry (TG-DTG) and Fourier transform infrared (FTIR) spectrophotometry. In addition, the kinetics analysis for the devulcanizing process via supercritical ethanol was established. It was found that the reaction temperature was the only significant parameter. When the temperature rose above 240 ºC, the reaction rate increased dramatically. A special phenomenon was observed that the devulcanizing reaction rate of natural rubber (NR) was faster than that of butadiene rubber (BR) in supercritical ethanol. Moreover, when the reaction temperature reached 270 ºC, the use of the devulcanizing reagent did not significantly affect the sol fraction. The analysis of experimental results indicated that supercritical ethanol beyond the critical temperature could strongly promote the devulcanizing reaction, maintaining polymer structure of products as the most intact state.
DOI: 10.6084/m9.figshare.11388741
title: <i>Magnaporthiopsis cynodontis</i>, a novel turfgrass pathogen with widespread distribution in the United States

description: The genus <i>Magnaporthiopsis</i> of Magnaporthaceae (Magnaporthales, Sordariomycetes, Ascomycota) contains species that are predominantly necrotrophic pathogens, often producing simple hyphopodia and dark, ectotrophic runner hyphae on plant roots and stems during colonization. Fungal isolates from turfgrass roots with dark and ectotrophic runner hyphae were examined and identified based on morphological, biological, and phylogenetic analyses. Maximum likelihood and Bayesian methods were implemented to obtain phylogenetic trees for partial sequences of the 18S nuc rDNA, ITS1-5.8S-ITS2 nuc rDNA internal transcribed spacer, and 28S nuc rDNA regions, and of the minichromosome maintenance complex 7 (<i>MCM7</i>), largest subunit of RNA polymerase II (<i>RPB1</i>), and translation elongation factor 1-alpha (<i>TEF1</i>) genes. Our isolates consistently formed a distinct and highly supported clade within <i>Magnaporthiopsis</i>. These findings were reinforced by common and distinctive biological and morphological characters. Additionally, we conducted pathogenicity evaluations and demonstrated the ability of this fungus to colonize roots of ultradwarf bermudagrass, one of its native hosts, via ectotrophic, dark runner hyphae, causing disease symptoms including root discoloration and reduced root and shoot mass. Altogether, our discoveries enabled recognition and description of a new species, <i>Magnaporthiopsis cynodontis</i>, which has widespread distribution in the United States.
DOI: 10.6084/m9.figshare.11388741.v1
title: <i>Magnaporthiopsis cynodontis</i>, a novel turfgrass pathogen with widespread distribution in the United States

description: The genus <i>Magnaporthiopsis</i> of Magnaporthaceae (Magnaporthales, Sordariomycetes, Ascomycota) contains species that are predominantly necrotrophic pathogens, often producing simple hyphopodia and dark, ectotrophic runner hyphae on plant roots and stems during colonization. Fungal isolates from turfgrass roots with dark and ectotrophic runner hyphae were examined and identified based on morphological, biological, and phylogenetic analyses. Maximum likelihood and Bayesian methods were implemented to obtain phylogenetic trees for partial sequences of the 18S nuc rDNA, ITS1-5.8S-ITS2 nuc rDNA internal transcribed spacer, and 28S nuc rDNA regions, and of the minichromosome maintenance complex 7 (<i>MCM7</i>), largest subunit of RNA polymerase II (<i>RPB1</i>), and translation elongation factor 1-alpha (<i>TEF1</i>) genes. Our isolates consistently formed a distinct and highly supported clade within <i>Magnaporthiopsis</i>. These findings were reinforced by common and distinctive biological and morphological characters. Additionally, we conducted pathogenicity evaluations and demonstrated the ability of this fungus to colonize roots of ultradwarf bermudagrass, one of its native hosts, via ectotrophic, dark runner hyphae, causing disease symptoms including root discoloration and reduced root and shoot mass. Altogether, our discoveries enabled recognition and description of a new species, <i>Magnaporthiopsis cynodontis</i>, which has widespread distribution in the United States.
DOI: 10.5281/zenodo.10683832
title: Supplementary Files for Earl Grey: a fully automated user-friendly transposable element annotation and analysis pipeline

description: This dataset contains all additional files referenced in Earl Grey: a full automated user-friendly transposable element annotation and analysis pipeline.

 

Additional File 1: Results and discussion for the selection of the default parameters for the BLAST, Extend, Align, Trim (BEAT) process.

Additional File 2: Tar archive containing configuration files and TE families to generate all nine simulated genomes.

Additional File 3: Tar archive containing reference TE coordinates in GFF format and GFF annotation files for each software used to annotate TEs in the simulated genomes.

Additional File 4: Excel file containing all supplementary tables with contents page.

Additional File 5: Distributions of TE consensus lengths generated by each methodology against the real TE consensus sequence lengths. 

Additional File 6: Extended version of figure 5a to illustrate the distribution of consensus lengths for EDTA, which extend beyond the limits set for readability.  

Additional File 7: Tar archive containing TE annotations for D. melanogaster annotated with each software, in GFF format.
DOI: 10.5281/zenodo.10683833
title: Supplementary Files for Earl Grey: a fully automated user-friendly transposable element annotation and analysis pipeline

description: This dataset contains all additional files referenced in Earl Grey: a full automated user-friendly transposable element annotation and analysis pipeline.

 

Additional File 1: Results and discussion for the selection of the default parameters for the BLAST, Extend, Align, Trim (BEAT) process.

Additional File 2: Tar archive containing configuration files and TE families to generate all nine simulated genomes.

Additional File 3: Tar archive containing reference TE coordinates in GFF format and GFF annotation files for each software used to annotate TEs in the simulated genomes.

Additional File 4: Excel file containing all supplementary tables with contents page.

Additional File 5: Distributions of TE consensus lengths generated by each methodology against the real TE consensus sequence lengths. 

Additional File 6: Extended version of figure 5a to illustrate the distribution of consensus lengths for EDTA, which extend beyond the limits set for readability.  

Additional File 7: Tar archive containing TE annotations for D. melanogaster annotated with each software, in GFF format.
DOI: 10.6084/m9.figshare.19976656.v1
title: Additional file 2 of Establish an allele-specific real-time PCR for Leishmania species identification

description: Additional file 2: Table S2. Leishmania interspecies polymorphism in 21 genes.
DOI: 10.23728/b2share.57315b8581cf45f6a5686b8ec1e0a788
title: Grassland Dynamics - Schrankogel (Austria) - 1994, 2004, 2014

description: species cover according to the GLORIA Field Manual: https://gloria.ac.at/downloads/Manual_5thEd_ENG.pdf (p 38);%;1x1m plots arranged in transects at southern slopes of Mt. Schrankogel: https://nph.onlinelibrary.wiley.com/doi/10.1111/nph.15290;visual estimate

used for the Horizon Europe project "Biodiversity Digital Twin for Advanced Modelling, Simulation and Prediction Capabilities" (https://biodt.eu/).
description: https://doi.org/10.2777/867331
DOI: 10.6084/m9.figshare.7194446.v1
title: MOESM7 of New insights into long noncoding RNAs and pseudogenes in prognosis of renal cell carcinoma

description: Additional file 7: Table S6. Â Alterations ofÂ pseudogenes, including mutation, copy number alteration and expression.
DOI: 10.6084/m9.figshare.20291133.v1
title: Additional file 4 of Light/dark phase influences intra-individual plasticity in maintenance metabolic rate and exploratory behavior independently in the Asiatic toad

description: Additional file 4.
DOI: 10.6084/m9.figshare.19976659
title: Additional file 3 of Establish an allele-specific real-time PCR for Leishmania species identification

description: Additional file 3: Table S3. The sensitivity of allele-specific real-time PCR assay.
DOI: 10.6084/m9.figshare.19976659.v1
title: Additional file 3 of Establish an allele-specific real-time PCR for Leishmania species identification

description: Additional file 3: Table S3. The sensitivity of allele-specific real-time PCR assay.
DOI: 10.6084/m9.figshare.20291141
title: Additional file 1 of LINC00893 inhibits the progression of prostate cancer through miR-3173-5p/SOCS3/JAK2/STAT3 pathway

description: Additional file 1. Western blot grayscale raw data.
DOI: 10.6084/m9.figshare.7186790.v1
title: Effect of Temperature on Devulcanization of Waste Sidewall Rubber by Supercritical Ethanol

description: The influence of temperature on devulcanization of waste sidewall rubber via supercritical ethanol was investigated. The effect of parameters on devulcanizing process was analyzed by a full factorial experimental design. The devulcanized products at different temperatures were characterized by gel permeation chromatography (GPC), differential scanning calorimetry (DSC), thermogravimetry and derivative thermogravimetry (TG-DTG) and Fourier transform infrared (FTIR) spectrophotometry. In addition, the kinetics analysis for the devulcanizing process via supercritical ethanol was established. It was found that the reaction temperature was the only significant parameter. When the temperature rose above 240 ºC, the reaction rate increased dramatically. A special phenomenon was observed that the devulcanizing reaction rate of natural rubber (NR) was faster than that of butadiene rubber (BR) in supercritical ethanol. Moreover, when the reaction temperature reached 270 ºC, the use of the devulcanizing reagent did not significantly affect the sol fraction. The analysis of experimental results indicated that supercritical ethanol beyond the critical temperature could strongly promote the devulcanizing reaction, maintaining polymer structure of products as the most intact state.
DOI: 10.6084/m9.figshare.7186412.v1
title: FABRICATION OF SPINEL COATING ON HP40 ALLOY AND ITS INHIBITION EFFECT ON CATALYTIC COKING DURING THERMAL CRACKING OF LIGHT NAPHTHA

description: Abstract A novel two-step process of Cr-Mn pack cementation and thermal oxidation was applied to fabricate a MnCr2O4 spinel coating on HP 40 alloy. The Cr-Mn diffusion layer formed after the Cr-Mn pack cementation process is lacking in Fe and Ni. A dense and uniform coating formed on the alloy following thermal oxidation. The coating is mainly composed of MnCr2O4 spinel phase, while the outer surface of the coating is completely MnCr2O4 spinel. The coating exhibits a favorable thickness of about 7 µm according to SEM and EDS maps of its cross-section. The MnCr2O4 spinel coating significantly affects the coking mechanism and coke property according to coking experiments. Raman spectroscopy shows that the coated sample inhibits catalytic coke formation as more disordered carbon and amorphous carbon layers are present. Moreover, the coating is stable in coking and decoking environments.
DOI: 10.6084/m9.figshare.14975280.v1
title: Collaborative Filtering with Awareness of Social Networks

description: In this paper, we present the NetRec method to leverage the social network data of users in collaborative filtering. We formulate two new network related terms and obtain convex optimization problems that incorporate assumptions regarding users’ social connections and preferences about products. Our theory demonstrates that this procedure leads to a sharper error bound than before, as long as the observed social network is well structured. We point out that the larger the noise magnitude in the observed user preferences, the larger the reduction in the magnitude of the error bound. Moreover, our theory shows that the combination of the network related term and the previously used term of nuclear norm gives estimates better than those achieved by any of them alone. We provide an algorithm to solve the new optimization problem and prove that it is guaranteed to find a global optimum. Both simulations and real data experiments are carried out to validate our theoretical findings. The application of the NetRec method on the Yelp data demonstrate its superiority over a state-of-the-art social recommendation method.
DOI: 10.6084/m9.figshare.19976656
title: Additional file 2 of Establish an allele-specific real-time PCR for Leishmania species identification

description: Additional file 2: Table S2. Leishmania interspecies polymorphism in 21 genes.
DOI: 10.6084/m9.figshare.14526452
title: Additional file 2 of Comprehensive analysis of differentially expressed circRNAs and ceRNA regulatory network in porcine skeletal muscle

description: Additional file 2: Table S2. Pearson correlations between different biological repeats within each LW and MS pigs’ longissimus dorsi muscle.
DOI: 10.6084/m9.figshare.14526452.v1
title: Additional file 2 of Comprehensive analysis of differentially expressed circRNAs and ceRNA regulatory network in porcine skeletal muscle

description: Additional file 2: Table S2. Pearson correlations between different biological repeats within each LW and MS pigs’ longissimus dorsi muscle.
DOI: 10.6084/m9.figshare.23938530
title: Genotype diversity enhances invasion resistance of native plants via soil biotic feedbacks

description: Data and code for "Cai Cheng, Zekang Liu, Qun Zhang, Xing Tian, Ruiting Ju, Bo Li, Mark van Kleunen, Jonathan M. Chase, Jihua Wu. 2024. Genotype diversity enhances invasion resistance of native plants via soil biotic feedbacks. Ecology Letters".
DOI: 10.6084/m9.figshare.6742955.v1
title: Additional file 7: of Transcriptome analysis of alternative splicing in peanut (Arachis hypogaea L.)

description: Table S7. Fatty acid related genes. (XLSX 250 kb)
DOI: 10.6084/m9.figshare.14526516
title: Additional file 1 of Serum proteomic profiling in patients with advanced Schistosoma japonicum-induced hepatic fibrosis

description: Additional file 1: Table S1. Differentially expressed proteins of serum samples between SHF with F2 and healthy controls (sheet 1). Table S2. Differentially expressed proteins of serum samples between SHF with F4 and SHF with F2 (sheet 2). Table S3. KEGG pathway analysis of the differentially expressed proteins of serum samples between SHF with F2 and healthy controls (fold change of ≥  ± 1.5) (sheet 3). Table S4. KEGG pathway analysis of the differentially expressed proteins of serum samples between SHF with F4 and SHF with F2 (fold change of ≥  ± 1.5) (sheet 4).