cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.kpr59k
title: Occurrence Download

description: A dataset containing 822 species occurrences available in GBIF matching the query:
{
 "Locality" : [
 "is RICAURTE; PAC. SIDE"
 ]
}

 The dataset includes 822 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081321-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jc9cv9
title: Occurrence Download

description: A dataset containing 131 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "TaxonKey is Acer miaotaiense P.C.Tsoong",
 "TaxonKey is Saussurea laniceps Hand.-Mazz.",
 "TaxonKey is Pterospermum menglunense H.H.Hsue",
 "TaxonKey is Lagerstroemia villosa Wall. ex Kurz",
 "TaxonKey is Osmanthus venosus Pamp.",
 "TaxonKey is Osmanthus pubipedicellatus L.C.Chia ex H.T.Chang",
 "TaxonKey is Meconopsis torquata Prain"
 ]
 }
 ]
}

 The dataset includes 131 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014700-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kxab2r
title: Occurrence Download

description: A dataset containing 3150 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Triturus pygmaeus (Wolterstorff, 1905)"
 ]
}

 The dataset includes 3150 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058143-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hgusjr
title: Occurrence Download

description: A dataset containing 43328 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Unknown evidence",
 "BasisOfRecord is Specimen"
 ]
 },
 "TaxonKey is Pinus nigra J.F.Arnold"
 ]
}

 The dataset includes 43328 records from 352 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008643-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dy6b5g
title: Occurrence Download

description: A dataset containing 566 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Pistacia vera L."
 ]
}

 The dataset includes 566 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066981-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rrc2fv
title: Occurrence Download

description: A dataset containing 4463 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Otaria flavescens (Shaw, 1800)"
 ]
}

 The dataset includes 4463 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009876-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ytqksc
title: Occurrence Download

description: A dataset containing 2269 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anodorhynchus hyacinthinus (Latham, 1790)"
 ]
}

 The dataset includes 2269 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008643-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6a2qsq
title: Occurrence Download

description: A dataset containing 28852 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Parthenium hysterophorus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 28852 records from 262 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028818-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8kaa7x
title: Occurrence Download

description: A dataset containing 2308 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Moths observed during the \"Objective 1000\" inventory project at the Botanical Garden Jean Massart (Auderghem, Brussels Capital Region)"
 ]
}

 The dataset includes 2308 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028821-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.swnp4f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Yuhina nigrimenta",
 "Country is one of (Brunei Darussalam, Indonesia, Philippines, Timor-Leste, Singapore)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028822-250920141307145/datasets/export for details.
DOI: 10.17026/ar/r8m31r
title: Proefsleuvenonderzoek Venlo Industrieterrein Trade Port Noord Proefsleuvenonderzoek aan de Industrieterrein Trade Port Noord te Venlo in de gemeente Venlo

description: &lt;p&gt;Uit de resultaten blijkt dat de sloop van de voormalige bebouwing in 1986 en egalisaties veel verstoring hebben veroorzaakt. Het aangetroffen plaggendek is in het westelijke deel van het onderzoeksgebied geheel verstoord. Ondanks dat zijn er in het plangebied, naast 20e eeuws gebruik, intacte 18e eeuwse resten van het achtererf van de Nieuwe Berkt aangetroffen. Het betreft twee waterputten, enkele kuilen, een greppel en mogelijk een potstal.&lt;/p&gt;
DOI: 10.15468/dl.kbwen6
title: Occurrence Download

description: A dataset containing 275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyclosorus parasiticus",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 275 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028823-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6z3cmx
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Galium sylvaticum",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028825-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21954/ou.rd.30218023
title: Video from the project: 'Creating Stages with Young People and Publics in Response to the Refugee Crisis in Europe. Mobilizing Affects and Politics through Creative Methods'.

description: The Participatory Action Research investigates how young people from refugee backgrounds represent their migration experiences through their artistic projects and the impact on public affects and politics. The artistic collaborators of the project have been interlocutors of my PhD project in Lesvos, which investigated borders, belongings and creative acts of young people (2019-2023). Our collaboration continued as they migrated onwards in other European countries.For this project, we conducted a series of public performances and university lectures in which the artists represented their artistic initiatives and migration experiences. The central location of the fieldwork was Lesvos, where the invited artists performed for an audience comprising people from refugee and local backgrounds. The research investigated the impact of the performance on the audience's affects and politics.The dataset includes a video from the event.
DOI: 10.21954/ou.rd.30218023.v1
title: Video from the project: 'Creating Stages with Young People and Publics in Response to the Refugee Crisis in Europe. Mobilizing Affects and Politics through Creative Methods'.

description: The Participatory Action Research investigates how young people from refugee backgrounds represent their migration experiences through their artistic projects and the impact on public affects and politics. The artistic collaborators of the project have been interlocutors of my PhD project in Lesvos, which investigated borders, belongings and creative acts of young people (2019-2023). Our collaboration continued as they migrated onwards in other European countries.For this project, we conducted a series of public performances and university lectures in which the artists represented their artistic initiatives and migration experiences. The central location of the fieldwork was Lesvos, where the invited artists performed for an audience comprising people from refugee and local backgrounds. The research investigated the impact of the performance on the audience's affects and politics.The dataset includes a video from the event.
DOI: 10.15468/dl.2xcmry
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Galium sylvaticum",
 "Country is Latvia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028826-250920141307145/datasets/export for details.
DOI: 10.15468/dl.6ybwjf
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Galium sylvaticum",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 34 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028827-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ee6cmz
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((173.91127 -39.04636,173.91882 -39.18023,174.2089 -39.13257,174.26605 -39.05306,174.16145 -38.97094,173.91127 -39.04636))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hymenophyllum sanguinolentum",
 "Year 2010-2025"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028828-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28927955
title: Trough levels of dalbavancin during long-term treatment of prosthetic joint infections

description: Dalbavancin is a lipoglycopeptide with an exceptionally long half-life that allows simplified administration, which may be of value in long-term treatment of bone and joint infections, such as prosthetic joint infections (PJIs). The objective was to determine trough (<i>C</i><sub>min</sub>) values of dalbavancin during long-term PJI treatment according to the recommendation of the Swedish National Guidelines for Bone and Joint Infections: a loading dose of 1,500 mg on day 1 and another 1,500 mg on days 8–14, followed by day 28 administration of 1,000 mg every two weeks or 500 mg per week. Twelve patients with PJI treated with at least six doses of dalbavancin were prospectively followed up, serum samples were collected, and renal function was investigated. Dalbavancin concentrations were measured using ultra-high pressure liquid chromatography coupled with unispray tandem mass spectrometry (UHPLC-MS/MS). The median serum concentration (<i>C</i><sub>min</sub>) 14 days after the first 1,500 mg dose was 36.3 mg/L (range: 6.6–62.4 mg/L). The median trough value at the date of the last given dose (1,000 mg) after a total of 6–7 doses was 53.6 mg/L (range: 32.0–97.5 mg/L). Three patients showed a tendency towards successive accumulation of dalbavancin during treatment. None of the patients showed any significant impairment in renal function. Therapeutic drug monitoring during long-term dalbavancin treatment is recommended to avoid the risk of accumulation and unnecessarily high trough levels. In many cases, such monitoring can allow the dosing interval to be extended.
DOI: 10.6084/m9.figshare.28927955.v1
title: Trough levels of dalbavancin during long-term treatment of prosthetic joint infections

description: Dalbavancin is a lipoglycopeptide with an exceptionally long half-life that allows simplified administration, which may be of value in long-term treatment of bone and joint infections, such as prosthetic joint infections (PJIs). The objective was to determine trough (<i>C</i><sub>min</sub>) values of dalbavancin during long-term PJI treatment according to the recommendation of the Swedish National Guidelines for Bone and Joint Infections: a loading dose of 1,500 mg on day 1 and another 1,500 mg on days 8–14, followed by day 28 administration of 1,000 mg every two weeks or 500 mg per week. Twelve patients with PJI treated with at least six doses of dalbavancin were prospectively followed up, serum samples were collected, and renal function was investigated. Dalbavancin concentrations were measured using ultra-high pressure liquid chromatography coupled with unispray tandem mass spectrometry (UHPLC-MS/MS). The median serum concentration (<i>C</i><sub>min</sub>) 14 days after the first 1,500 mg dose was 36.3 mg/L (range: 6.6–62.4 mg/L). The median trough value at the date of the last given dose (1,000 mg) after a total of 6–7 doses was 53.6 mg/L (range: 32.0–97.5 mg/L). Three patients showed a tendency towards successive accumulation of dalbavancin during treatment. None of the patients showed any significant impairment in renal function. Therapeutic drug monitoring during long-term dalbavancin treatment is recommended to avoid the risk of accumulation and unnecessarily high trough levels. In many cases, such monitoring can allow the dosing interval to be extended.
DOI: 10.6084/m9.figshare.29960099
title: SARS-CoV-2 XFG: a genomic insight into the new recombinant

description: SARS-CoV-2 XFG: a genomic insight into the new recombinant
DOI: 10.6084/m9.figshare.29960099.v1
title: SARS-CoV-2 XFG: a genomic insight into the new recombinant

description: SARS-CoV-2 XFG: a genomic insight into the new recombinant
DOI: 10.6084/m9.figshare.29149619
title: Dynamics of SARS-CoV-2 variants and mutations in Central Sweden between 2023 and 2024 and their potential implications on monoclonal antibodies pemivibart and sipavibart as PrEP in the region

description: Monoclonal antibodies (mAbs) are an important option against SARS-CoV-2, especially as pre-exposure prophylaxis (PrEP) for patients with immune system impairment. PrEP mAbs like sipavibart and pemivibart have been approved for limited use in several countries. Certain SARS-CoV-2 variants carry mutations in the spike (S) protein, conferring resistance to these mAbs. We aimed to examine the relative abundance of different circulating SARS-CoV-2 variants/mutations in central Sweden between 2023 and 2024, and to predict the effectiveness of sipavibart and pemivibart. An amplicon-based Nanopore sequencing method was used for sequencing SARS-CoV-2 samples. Coronapp was used to identify mutations in these sequences. Using the published <i>in vitro</i> resistance data for sipavibart and pemivibart, the effectiveness of these mAbs was inferred. We have observed that the relative abundance of the KP.3.1.1 variant and the Q493E mutation started to increase in the later part of 2024 in the region. Also, since April 2024, the relative abundance of the F456L mutation reached 100% during many weeks until the end of the study period. The KP.3.1.1 variant is significantly resistant to pemivibart. Further, the presence of the F456L mutation in the Omicron subvariants confers high fold resistance towards sipavibart. The use of sipavibart or pemivibart as PrEP for COVID-19 in the region may currently not be effective unless new SARS-CoV-2 variants appear not containing these resistance mutations. Further, new mAbs under development as PrEP for COVID-19 can be effectively used by routinely sequencing SARS-CoV-2 in patients to identify variants and resistance mutations.
DOI: 10.6084/m9.figshare.29149619.v1
title: Dynamics of SARS-CoV-2 variants and mutations in Central Sweden between 2023 and 2024 and their potential implications on monoclonal antibodies pemivibart and sipavibart as PrEP in the region

description: Monoclonal antibodies (mAbs) are an important option against SARS-CoV-2, especially as pre-exposure prophylaxis (PrEP) for patients with immune system impairment. PrEP mAbs like sipavibart and pemivibart have been approved for limited use in several countries. Certain SARS-CoV-2 variants carry mutations in the spike (S) protein, conferring resistance to these mAbs. We aimed to examine the relative abundance of different circulating SARS-CoV-2 variants/mutations in central Sweden between 2023 and 2024, and to predict the effectiveness of sipavibart and pemivibart. An amplicon-based Nanopore sequencing method was used for sequencing SARS-CoV-2 samples. Coronapp was used to identify mutations in these sequences. Using the published <i>in vitro</i> resistance data for sipavibart and pemivibart, the effectiveness of these mAbs was inferred. We have observed that the relative abundance of the KP.3.1.1 variant and the Q493E mutation started to increase in the later part of 2024 in the region. Also, since April 2024, the relative abundance of the F456L mutation reached 100% during many weeks until the end of the study period. The KP.3.1.1 variant is significantly resistant to pemivibart. Further, the presence of the F456L mutation in the Omicron subvariants confers high fold resistance towards sipavibart. The use of sipavibart or pemivibart as PrEP for COVID-19 in the region may currently not be effective unless new SARS-CoV-2 variants appear not containing these resistance mutations. Further, new mAbs under development as PrEP for COVID-19 can be effectively used by routinely sequencing SARS-CoV-2 in patients to identify variants and resistance mutations.
DOI: 10.6084/m9.figshare.24866853
title: Specific gut microbiome signature predicts hepatitis B virus-related hepatocellular carcinoma patients with microvascular invasion

description: We aimed to assess differences in intestinal microflora between patients with operable hepatitis B virus-related hepatocellular carcinoma (HBV-HCC) with microvascular invasion (MVI) and those without MVI. Additionally, we investigated the potential of the microbiome as a non-invasive biomarker for patients with MVI. We analyzed the preoperative gut microbiomes (GMs) of two groups, the MVI (<i>n</i> = 46) and non-MVI (<i>n</i> = 56) groups, using 16S ribosomal RNA gene sequencing data. At the operational taxonomic unit level, we employed random forest models to predict MVI risk and validated the results in independent validation cohorts [MVI group (<i>n</i> = 17) and non-MVI group (<i>n</i> = 15)]. β diversity analysis, utilizing weighted UniFrac distances, revealed a significant difference between the MVI and non-MVI groups, as indicated by non-metric multidimensional scaling and principal coordinate analysis. We also observed a significant correlation between the characteristic intestinal microbial communities at the genus level and their main functions. Nine optimal microbial markers were identified, with an area under the curve of 79.76% between 46 MVI and 56 non-MVI samples and 79.80% in the independent verification group. This pioneering analysis of the GM in patients with operable HBV-HCC with and without MVI opens new avenues for treating HBV-HCC with MVI. We successfully established a diagnostic model and independently verified microbial markers for patients with MVI. As preoperative targeted biomarkers, GM holds potential as a non-invasive tool for patients with HBV-HCC with MVI.
DOI: 10.6084/m9.figshare.24866853.v1
title: Specific gut microbiome signature predicts hepatitis B virus-related hepatocellular carcinoma patients with microvascular invasion

description: We aimed to assess differences in intestinal microflora between patients with operable hepatitis B virus-related hepatocellular carcinoma (HBV-HCC) with microvascular invasion (MVI) and those without MVI. Additionally, we investigated the potential of the microbiome as a non-invasive biomarker for patients with MVI. We analyzed the preoperative gut microbiomes (GMs) of two groups, the MVI (<i>n</i> = 46) and non-MVI (<i>n</i> = 56) groups, using 16S ribosomal RNA gene sequencing data. At the operational taxonomic unit level, we employed random forest models to predict MVI risk and validated the results in independent validation cohorts [MVI group (<i>n</i> = 17) and non-MVI group (<i>n</i> = 15)]. β diversity analysis, utilizing weighted UniFrac distances, revealed a significant difference between the MVI and non-MVI groups, as indicated by non-metric multidimensional scaling and principal coordinate analysis. We also observed a significant correlation between the characteristic intestinal microbial communities at the genus level and their main functions. Nine optimal microbial markers were identified, with an area under the curve of 79.76% between 46 MVI and 56 non-MVI samples and 79.80% in the independent verification group. This pioneering analysis of the GM in patients with operable HBV-HCC with and without MVI opens new avenues for treating HBV-HCC with MVI. We successfully established a diagnostic model and independently verified microbial markers for patients with MVI. As preoperative targeted biomarkers, GM holds potential as a non-invasive tool for patients with HBV-HCC with MVI.
DOI: 10.15468/dl.953q8v
title: Occurrence Download

description: A dataset containing 4887 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Camphora officinarum"
 ]
}

 The dataset includes 4887 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028830-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5425vz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Yuhina brunneiceps",
 "Country is one of (Brunei Darussalam, Indonesia, Philippines, Timor-Leste, Singapore)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028832-250920141307145/datasets/export for details.