cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34808/8g12-6758
title: Burkitt lymphoma, NOS - Male, 47 - Tissue image [6200730021571241]

description: This is the histopathological image of CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 47Clinical description: Tumor of sacral area.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: MATURE B-CELL LYMPHOMASDiagnosis: Burkitt lymphoma, NOSResult of the histopathological examination: Burkitt lymphoma: CD20+, CD10+, bcl6 >30%+, cmyc+, MUM1 focally weak +, bcl2-, Tdt-, Cyclin D1-, Ki-67 100% ( MYC rearrangement, no BCL2 and BCL6 rearrangement).Sample:Material: FFPECollecting method: Surgical biopsyTopography: CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUESOrgan: CONNECTIVE, SUBCUTANEOUS AND OTHER SOFT TISSUESTissue: Connective, subcutaneous and other soft tissues of sacrococcygeal regionType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/qg1h-tq18
title: Basal cell carcinoma, NOS - Female, 75 - Tissue image [6200730021566761]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 75Clinical description: Ulcerated lesion of skin of auricle with dimensions 1 x 0,9 x 0,1 cm.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: BASAL CELL NEOPLASMSDiagnosis: Basal cell carcinoma, NOSResult of the histopathological examination: Basal cell carcinoma of skin.Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: Auricle, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/4gnp-s630
title: Basal cell carcinoma, nodular - Female, 81 - Tissue image [6200730021563651]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 81Clinical description: Ulcerated lesion of skin of eyelid.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: BASAL CELL NEOPLASMSDiagnosis: Basal cell carcinoma, nodularResult of the histopathological examination: Basal cell carcinoma of skin (nodular type).Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: EyelidType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/q3w9-j642
title: Lichen sclerosus et atrophicus - Female, 66 - Tissue image [6200730021564581]

description: This is the histopathological image of VULVA tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 66Clinical description: Lesion of skin of vulva.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XII - Diseases of the skin and subcutaneous tissueDiagnosis: Lichen sclerosus et atrophicusResult of the histopathological examination: Lichen sclerosus et atrophicus.Sample:Material: FFPECollecting method: Surgical biopsyTopography: FEMALE GENITAL ORGANSOrgan: VULVATissue: Skin of vulvaType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/n01d-9897
title: Dermatofibroma, NOS - Male, 28 - Tissue image [6200730021579931]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 28Clinical description: Grey lesion of skin of thigh with dimensions 1,2 x 0,9 x 0,1 cm.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: FIBROMATOUS NEOPLASMSDiagnosis: Dermatofibroma, NOSResult of the histopathological examination: Dermatofibroma.Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: Skin of thighType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.26183/k97b-q415
title: The ATIS Planes dataset: Investigation of event-based surfaces for high-speed detection, unsupervised feature extraction, and object recognition
DOI: 10.15151/esrf-es-771452450
title: Macromolecular Crystallography in Bordeaux/Lyon/Toulouse IECB IBGC CBMN / IBCP-MMSB ICBMS / IPBS

description: The different research teams who are part of this BAG are located in Bordeaux, Lyon and Toulouse. They are mainly working on worldwide health concerns or biotechnological relevant projects. In more details, infectiology, molecular assemblies, biosynthetic pathways or glycobiology are their main research axises. Important results have been obtained so far regarding the development of new therapeutic strategies against several infectious diseases or regarding plastic bioremediation. In order to go further into details of all these studies, access to ESRF facilities is a requirement.
DOI: 10.15151/esrf-es-861350801
title: Powder diffraction on old inhouse samples

description: Microbeam XRD on old inhouse samples, previously measured during batteries and fuel cell experiments. Samples sealed inside quartz capillaries, to be measured ex situ.
DOI: 10.15151/esrf-es-806719093
title: Unexpected behavior of ethylene adsorption in metal-organic framework CPO-54

description: Open metal sites are strong adsorption sites in metal-organic frameworks. Sorption experiments show that the enthalpy of adsorption of ethylene on the materials investigated herein does not follow the trend observed typically for other adsorptives with similar strength of interaction. The experiment’s aim is to investigate the structural response of the MOFs upon exposure to ethylene and compare it to other relevant adsorptives.
DOI: 10.15151/esrf-es-861519569
title: Understanding Structure Sensitivity on the Ni-Ga System for CO2 Hydrogenation to Methanol: An Operando Difference PDF Study

description: The goal of this study is to identify structural descriptors for the catalytic performance of very small (1-2 nm) silica supported, Ni-Ga nanoparticles for the CO2 hydrogenation to CH3OH. Supported nanoparticles of small size (up to a few nanometers in diameter) feature different surface sites than their larger counterparts, leading to a distinct catalytic behaviour of such materials. To probe the structure of the NixGay/SiO2 catalysts under reaction conditions and elucidate the origin of their favourable catalytic properties, we will use operando X-ray total scattering. The identification of structural similarities and differences with materials of larger particle size, will be key to advance our understanding of Ni-Ga based alloys and intermetallics for CO2 hydrogenation to methanol.
DOI: 10.15151/esrf-es-806720178
title: Time-resolved XAFS/XRD study of low-temperature WGS catalysts : effect of cesium substitution on the structure, stability and performance.

description: The aim of this investigation is to determine the effect of addition of Cs ions in Cu/ZnO/Al2O3 catalysts widely used for low-temperature water-gas shift (LT-WGS) reaction. In particular, we aim to determine the conditions that lead to particle sintering during the initial activation procedure, specifically in presence of H2/H2O at various partial pressures, and how Cs concentration affect the stability and sintering properties of the catalyst. In order to do this, we require combined XRD/XAS/PDF methods as it provides direct information the long range order present in the catalyst and at the same time observing both copper and Zinc K-edge through X-ray absorption spectroscopy to determine the short range and electronic structures of this system, under in situ operando conditions.
DOI: 10.15151/esrf-es-807925515
title: In Situ observation of SnO2 nanoparticle formation in the gas phase

description: We propose an in situ experiment combining small and wide angle X-ray scattering (SAXS & WAXS) to probe the formation process of SnO2 nanoparticles (NPs) by chemical vapor synthesis (CVS) in the gas phase. Utilizing the high-brilliance of ESRF’s ID02 beamline, the formation process within highly diluted aerosols of NPs will be accessible from the first steps of nucleation and growth via agglomeration to the fully developed NP. This experiment on the model system SnO2-NP will widen our understanding of gas-phase based NP formation processes on the nanoscale in general and will find applications on other technological relevant nanoparticle systems.
DOI: 10.15151/esrf-es-804824725
title: Understanding the role of microstructural repeatability in the functional fatigue behavior of shape memory alloys

description: Martensitic phase transformation (MPT), a diffusionless solid-to-solid phase transformation, is the enabling mechanism behind the novel behaviors of shape memory alloys (SMAs). However, functional fatigue—changes to the material during cyclic loading that diminish its exploitative properties—continues to be a major technological barrier. Functional fatigue is caused by dislocations that generate as a result of the MPT. Here, we plan to test a new hypothesis on the role of "microstructural repeatability" of the MPT. We propose a multiscale, multimodal experiment during stress-induced MPT cycling using novel lightweight Mg-Sc SMAs as a model material. The initial microstructure will be measured using DCT. The increase in dislocation density will be characterized in individual grains using XRTT, and these functional fatigue related quantities will be correlated with microstructural repeatability using 3DXRD.
DOI: 10.15151/esrf-es-806719966
title: Evolution of the shark skeleton

description: Comparative jawed-vertebrate hard-tissue microstructural dataset.
DOI: 10.15151/esrf-es-804825143
title: Fast scanning SAXS on hydrated biological cells

description: During the last decade, the use of hard X-ray scanning SAXS as a cell imaging method has been pushed to yield structural information at sub-micrometer scales. As biological cells are weak scatterers, the best resolution is typically achieved for freeze-dried samples, while measurements on hydrated cells remain more difficult. The challenges associated to hydrated cells include not only reduced resolution and contrast, but also increased radiation damage and the need for more complex sample environments. In the proposed experiment, we suggest to examine hydrated cells in a dedicated sample chamber at the nanobranch of ID13, in order to collect data on local structural information in a highly spatially resolved manner.
DOI: 10.15151/esrf-es-804828516
title: Electronic structure and local moments in single-crystaline MnFe(P,Si) probed by linear dichroic XES and HERFD-XAS

description: MnFe(P,Si) is one of the rare examples presenting an isostructural first-order ferromagnetic magnetic transition (FOMT) at ambient conditions. Since the discovery of their giant magnetocaloric effect, this system attracts a continuing attention, both for its potential applications and for the scientific interest to unravel the underlying physical mechanism of the FOMT. Emission spectroscopy at Fe and Mn Kβ edges, which can provide information on the local magnetic moments irrespectively of the magnetic order, is uniquely suited to address these questions. Therefore, we intend to measure the temperature dependence of Fe and Mn Kβ XES spectra across the FOMT. In addition, to clarify the change in the electronic structure we will exploit the improved resolution offered by high energy resolution fluorescence detected in XAS, as well as the directionality of XES linear dichroism to pinpoint the change in the electronic density across the FOMT to specific orbitals.
DOI: 10.15151/esrf-es-744175308
title: Release of metals and dissolution of mineral fibres in THP1 macrophagic cell-line systems exposed to chrysotile asbestos

description: Pathogenic mechanisms of absestos-related diseases are still not well understood. In chrysotile, the most commercialized asbestos, Fe and other toxic metals are worth considering in its pathogenicity. Their release is strictly connected to that of Mg when fibres are dissolved in the lung environment. In vitro THP1-cells studies with chrysotile fibres, reporting the contribution of Fe in cells mortality, demonstrated the formation of aggregated structures of both fibrous and non-fibrous species. In these clusters, we identified micrometric iron compounds by Raman spectroscopy as Fe oxides and sulphides. Dissolution products herein needs further investigation, especially in the spatial distribution of elemental Fe and toxic metals. Synchrotron-based X-ray fluorescence mapping and micro-XANES analyses are expected to clarify the metals mobilization mechanism, highlighting both their intracellular spatial distribution and the changes in their valence state.
DOI: 10.15151/esrf-es-804825503
title: Studying Crowding Dynamics in Concentrated Protein Solutions With XPCS

description: Eukaryotic cells provide highly concentrated environments containing a variety of different molecular components with specific functions. Diffusion dynamics of proteins in such crowded environments are crucial for biological processes and are strongly affected by molecular interactions and the microscopic environment. Molecular crowding can dramatically alter molecular motion and thus influence the biological function of proteins. A case in point is the theoretically predicted slowing down of the protein dynamics due to the formation of local transient clusters. Making use of the superior coherence properties of the ESRF-EBS we propose here to study crowding effects in highly concentrated apoferritin solutions with Polyethylene glycol as a crowding agent by XPCS. We will systematically measure the q-dependence and concentration dependence of the diffusion constants and other dynamic parameters to determine the molecular details of the diffusion dynamics in crowded protein solutions.
DOI: 10.15151/esrf-es-804830555
title: Frustration driven hidden electronic orders in Sr2VO3FeAs

description: A promising route to realizing such unconventional electronic states is to combine mutually distinct order parameters in heterostructures. Sr2VO3FeAs is a superlattice of superconducting [SrFeAs]+1 and Mott-insulating [SrVO3]-1 layers, which favors a Q = (pi,0) stripe order and Q = (pi,pi) Néel order, respectively. A nuclear magnetic resonance study discovered a hidden order below TO ~ 155K without any evidence of apparent symmetry breaking. Furthermore, our preliminary resonant inelastic x-ray scattering (RIXS) results revealed an incommensurate magnetic instability well correlated with the ordering temperature from magneto-transport, TN ~ 55K and coexisting with the superconductivity. We conjecture the stripe order gives a way to the formation of incommensurate order and ultimately the hidden order by frustration between V and Fe. We propose to use ultra-high-resolution RIXS at the Fe L3 edge to measure the magnetic excitation spectra that encode dynamic spin-spin correlations.
DOI: 10.15151/esrf-es-822513073
title: Al2TiO5 sudied by in situ Laue microdiffraction (continuation of a32 2 836)

description: Aluminum titanate polycrystalline materials are commonly used at the industrial scale for various applications. The intrinsic properties of b-Al2TiO5 are strongly anisotropic and not easy to determine. Nevertheless, quite recent works, on single crystals or polycrystalline bulk or powdered materials, allow to access more or less to the variation as a function of the temperature of some of these intrinsic properties. During this experiment we expect to get data allowing to understand the role of the microstructure on the actual properties of aluminum titanate dense polycrystals
DOI: 10.5517/ccdc.csd.cc290spt
title: CCDC 2115926: Experimental Crystal Structure Determination

description: Related Article: Cansu Gökçe Topkaya, Tolga Göktürk, Tuncer Hökelek, Esin Sakalli Çetİn, Sultan Kincal, Ramazan Güp|2022|J.Mol.Struct.|1266|133453|doi:10.1016/j.molstruc.2022.133453
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2b9xp8
title: CCDC 2154490: Experimental Crystal Structure Determination

description: Related Article: Yuri G. Kappenberg, Pablo A. Nogara, Felipe S. Stefanello, Luís Henrique Moretto, Patrícia M. Santos, João.B.T. Rocha, Nilo Zanatta, Marcos.A.P. Martins, Helio G. Bonacorso|2022|J.Mol.Struct.|1266|133485|doi:10.1016/j.molstruc.2022.133485
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.6656839
title: Reproduction package for the publication 'Galaxy cluster photons alter the ionisation state of the nearby warm-hot intergalactic medium'

description: The following files can be used to reproduce the figures and data from the paper <strong>Galaxy cluster photons alter the ionisation state of the nearby warm-hot intergalactic medium</strong><strong> </strong>by L. Štofanová, A. Simionescu, N. A. Wijers, J. Schaye, and J. Kaastra to be accepted in Monthly Notices of the Royal Astronomical Society (MNRAS).
description: {"references": ["\u0160tofanov\u00e1, L. et al. (2022)", "Stofanova, L. et al. (2022)", "Stofanov\u00e1, L. et al. (2022)"]}
DOI: 10.17632/vbg6ws3src.2
title: Óbitos em municípios brasileiros (1996-2018)

description: Em anexo estão disponíveis dados sobre os óbitos ocorridos no Brasil, separados por municípios e estados, no período de 1996 a 2018. Um caderno Jupyter realiza análise exploratória destes dados: https://github.com/JoaoAlmeida/Analise-de-Obitos-em-Municipios-Brasileiros/blob/main/An%C3%A1lise%20Explorat%C3%B3ria.ipynb

Os dados fornecidos no dataset "municipio.csv" contém registros de óbitos em cidades brasileiras. Os atributos disponíveis são: estado, id_municipio, ano, e quantidade de óbitos. O dataset "municipio_causa.csv" permite identificar a causa básica dos óbitos registrados. Os atributos disponíveis são: estado, id_municipio, causa_basica, ano, numero_obitos.

Os dados destes datasets são provenientes da iniciativa Base de Dados. Esta iniciativa tem como missão organizar e mapear bases de dados brasileiras e internacionais, facilitando o acesso e uso de dados por acadêmicos, jornalistas, desenvolvedores, e sociedade civil. Também é possível encontrar um manual completo com a descrição das tabelas e dicionário de dados das colunas exportadas, caso seja necessário. Mais informações sobre a iniciativa em: https://basedosdados.org/
DOI: 10.17632/ywfgkk5pky.2
title: Instances for “Rapid Influence Maximization on Social Networks: The Positive Influence Dominating Set Problem"

description: We provide the instances used in the paper “Rapid Influence Maximization on Social Networks: The Positive Influence Dominating Set Problem”, by S. Raghavan and Rui Zhang, published in INFORMS Journal on Computing (https://doi.org/10.1287/ijoc.2021.1144). This repository contains the 100 instances used in the paper.

All the instances used in the paper are provided in a compressed archive. The accompanying data is contained in the following file:
• PIDS_Instances.zip

Description: There is one main folder, which contains 100 instances based on 10 real-world graphs.

For graphs Gnutella, Anybeat, Advogato, Escorts, Hamster, Ning, and Delicious, the setting is as follows: For each instance file, there are m + 2 lines. The first m lines provide the edges in the graphs. Nodes are labeled from 0 to n where n is the largest number in the first m lines. The (m + 1)th line contains the weight (b) for each node. The (m + 2)th line contains the threshold value (g) for each node.

For graphs Flixster, Youtube, and Lastfm, the setting is as follows: Each real-world graph “G” is described by the file named “G_Graph.txt” which contains the edges in the graph. Nodes are labeled from 0 to n, where n is the largest number in the file. Each line provides the two end nodes of an edge. The 10 instances associated with each graph “G” are provided in the 10 files named “G_i.txt” for i in {0, 1, · · · , 9}. In each file, there are two lines. The first line contains the weight (b) for each node. The second line contains the threshold value (g) for each node.

The excel file “PIDS_Results.xlsx” reports, for each instance, the upper and lower bounds obtained in the paper.
DOI: 10.17632/wybgt3wj5x.2
title: Instances for “Influence Maximization with Latency Requirements on Social Networks”

description: We provide the instances used in the paper “Influence Maximization with Latency Requirements on Social Networks”, by S. Raghavan and Rui Zhang, published in INFORMS Journal on Computing (https://doi.org/10.1287/ijoc.2021.1095). This repository contains the 100 instances used in the paper.

All the instances used in the paper are provided in a compressed archive. The accompanying data is contained in the following file:
• PIDS-PP_Instances.zip

Description: There is one main folder, which contains 100 instances based on 10 real-world graphs.

Each real world graph “G” is described by the file named “G_Graph.txt” which contains the edges in the graph. Nodes are labeled from 0 to n, where n is the largest number in the file. Each line provides the two end nodes of an edge. The 10 instances associated with each graph “G” are provided in the 10 files named “G_i.txt” for i in {0, 1, · · · , 9}. In each file, there are two lines. The first line contains the threshold (b) for each node. The second line contains the influence factor (f) for each node.

The excel file “PIDS-PP_Results.xlsx” reports, for each instance, the upper and lower bounds obtained in the paper.