cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/8x3y5swppw.5
title: Driver-ASE testing dataset

description: (1) This 'Database.zip' is required by Driver-ASE, which is a software to search for potential driver mutations located in different regulatory regions by associating mutations with gene-level ASE. Due to the large size of the impute2 and shapeit reference datasets, we make it freely available at the following shared link via https://mega.nz:
https://mega.nz/file/p1R0iZjB#SBHjUncZf4qomuBkfw2r8GnquDK1wgE0DAw20IEsRcc
Alternatively, we uploaded a partial data of 'Database.zip' here, which doesn't have impute2 and shapeit reference datasets and is named as ''PartialDatabase4DriverASE.tar.gz'. Users can download the original impute2 and shapeit datasets from the following links and put them into the uncompressed directory of 'Database' for running our package Driver-ASE. 
#Download 1000 Genome Project reference haplotype files;
#https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3.html
wget https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3.tgz
wget https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3_chrX.tgz

#Download shapeit2 phased 1000 Genome Project reference files;
#https://mathgen.stats.ox.ac.uk/impute/data_download_1000G_phase1_integrated_SHAPEIT2_16-06-14.html
wget https://mathgen.stats.ox.ac.uk/impute/ALL.integrated_phase1_S#HAPEIT_16-06-14.nomono.tgz

(2) The 'Pipeline2MapMuts2DiffRegulatoryRegions.zip' contains perl scripts for mapping mutations to different regulatory regions and prepare mutation annotation data for associating mutations with gene-level ASE, which is detailed in the github of Driver-ASE (https://github.com/MichealRollins-Green/Driver-ASE). Note: please run the shell script 'Run_Pipeline.sh' under the directory contain it in Linux system! The final results would be in the directory 'final_outputdir'.
DOI: 10.17632/8x3y5swppw.1
title: Driver-ASE testing dataset

description: (1) This 'Database.zip' is required by Driver-ASE, which is a software to search for potential driver mutations located in different regulatory regions by associating mutations with gene-level ASE. Due to the large size of the 'Database.zip' (&gt;26GB), it is freely available at the following shared link via https://mega.nz: (2) The 'Pipeline2MapMuts2DiffRegulatoryRegions.zip' contains perl scripts for mapping mutations to different regulatory regions and prepare mutation annotation data for associating mutations with gene-level ASE, which is detailed in the github of Driver-ASE (https://github.com/MichealRollins-Green/Driver-ASE).
DOI: 10.17632/8x3y5swppw.2
title: Driver-ASE testing dataset

description: (1) This 'Database.zip' is required by Driver-ASE, which is a software to search for potential driver mutations located in different regulatory regions by associating mutations with gene-level ASE. Due to the large size of the 'Database.zip' (&gt;26GB), it is freely available at the following shared link via https://mega.nz: https://mega.nz/file/p1R0iZjB#SBHjUncZf4qomuBkfw2r8GnquDK1wgE0DAw20IEsRcc (2) The 'Pipeline2MapMuts2DiffRegulatoryRegions.zip' contains perl scripts for mapping mutations to different regulatory regions and prepare mutation annotation data for associating mutations with gene-level ASE, which is detailed in the github of Driver-ASE (https://github.com/MichealRollins-Green/Driver-ASE).
DOI: 10.17632/8x3y5swppw.3
title: Driver-ASE testing dataset

description: (1) This 'Database.zip' is required by Driver-ASE, which is a software to search for potential driver mutations located in different regulatory regions by associating mutations with gene-level ASE. Due to the large size of the 'Database.zip' (&gt;26GB), it is freely available at the following shared link via https://mega.nz: https://mega.nz/file/p1R0iZjB#SBHjUncZf4qomuBkfw2r8GnquDK1wgE0DAw20IEsRcc (2) The 'Pipeline2MapMuts2DiffRegulatoryRegions.zip' contains perl scripts for mapping mutations to different regulatory regions and prepare mutation annotation data for associating mutations with gene-level ASE, which is detailed in the github of Driver-ASE (https://github.com/MichealRollins-Green/Driver-ASE). Note: please run the shell script 'Run_Pipeline.sh' under the directory contain it in Linux system! The final results would be in the directory 'final_results'.
DOI: 10.17632/8x3y5swppw.4
title: Driver-ASE testing dataset

description: (1) This 'Database.zip' is required by Driver-ASE, which is a software to search for potential driver mutations located in different regulatory regions by associating mutations with gene-level ASE. Due to the large size of the 'Database.zip' (&gt;26GB), it is freely available at the following shared link via https://mega.nz: https://mega.nz/file/p1R0iZjB#SBHjUncZf4qomuBkfw2r8GnquDK1wgE0DAw20IEsRcc (2) The 'Pipeline2MapMuts2DiffRegulatoryRegions.zip' contains perl scripts for mapping mutations to different regulatory regions and prepare mutation annotation data for associating mutations with gene-level ASE, which is detailed in the github of Driver-ASE (https://github.com/MichealRollins-Green/Driver-ASE). Note: please run the shell script 'Run_Pipeline.sh' under the directory contain it in Linux system! The final results would be in the directory 'final_outputdir'.
DOI: 10.17632/8x3y5swppw.6
title: Driver-ASE testing dataset

description: (1) This 'Database.zip' is required by Driver-ASE, which is a software to search for potential driver mutations located in different regulatory regions by associating mutations with gene-level ASE. Due to the large size of the impute2 and shapeit reference datasets, we make it freely available at the following shared link via https://mega.nz:
https://mega.nz/file/p1R0iZjB#SBHjUncZf4qomuBkfw2r8GnquDK1wgE0DAw20IEsRcc
Alternatively, we uploaded a partial data of 'Database.zip' here, which doesn't have impute2 and shapeit reference datasets and is named as ''PartialDatabase4DriverASE.tar.gz'. Users can download the original impute2 and shapeit datasets from the following links and put them into the uncompressed directory of 'Database' for running our package Driver-ASE. 
#Download 1000 Genome Project reference haplotype files;
#https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3.html
wget https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3.tgz
wget https://mathgen.stats.ox.ac.uk/impute/1000GP_Phase3_chrX.tgz

#Download shapeit2 phased 1000 Genome Project reference files;
#https://mathgen.stats.ox.ac.uk/impute/data_download_1000G_phase1_integrated_SHAPEIT2_16-06-14.html
wget https://mathgen.stats.ox.ac.uk/impute/ALL.integrated_phase1_S#HAPEIT_16-06-14.nomono.tgz

(2) The 'Pipeline2MapMuts2DiffRegulatoryRegions.zip' contains perl scripts for mapping mutations to different regulatory regions and prepare mutation annotation data for associating mutations with gene-level ASE, which is detailed in the github of Driver-ASE (https://github.com/MichealRollins-Green/Driver-ASE). Note: please run the shell script 'Run_Pipeline.sh' under the directory contain it in Linux system! The final results would be in the directory 'final_outputdir'.
DOI: 10.17632/wr4gcnnftn.1
title: Stevens-Johnson Syndrome Supplementary Tables and Figures

description: Supplementary Tables (I-X) and Figures (1-3) for article titled "Epidemiology of Stevens-Johnson syndrome and toxic epidermal necrolysis in the United States and factors predictive of outcome."
DOI: 10.6084/m9.figshare.23807070
title: data

description: 温度分布在深层地质处置库（DGR）的安全性能评估和热尺寸设计中起着至关重要的作用，用于处理高放废物。本研究建立了单容器二维轴对称传热模型。利用变量分离、脉冲定理和傅里叶变换等方法，推导了DGR中温度分布的解析解。通过与现有的半解析热源和线热源解决方案进行比较，验证了该模型的有效性。最后，利用所提出的分析解对原位测试结果进行预测。所提出的解析解能够准确、快速地获得DGR的温度分布，用于实际应用。
DOI: 10.6084/m9.figshare.23807070.v1
title: data

description: 温度分布在深层地质处置库（DGR）的安全性能评估和热尺寸设计中起着至关重要的作用，用于处理高放废物。本研究建立了单容器二维轴对称传热模型。利用变量分离、脉冲定理和傅里叶变换等方法，推导了DGR中温度分布的解析解。通过与现有的半解析热源和线热源解决方案进行比较，验证了该模型的有效性。最后，利用所提出的分析解对原位测试结果进行预测。所提出的解析解能够准确、快速地获得DGR的温度分布，用于实际应用。
DOI: 10.17632/4wm2fb39kk.1
title: Supplementary

description: Supplementary
DOI: 10.17632/4wm2fb39kk.2
title: Supplementary Table S1

description: Supplementary Table S1
DOI: 10.17632/6v9g8dn4jz.1
title: Workplace incivility, emotional exhaustion and adaptive performance

description: Survey dataset on workplace incivility, emotional exhaustion and adaptive performance among Malaysian frontliners
DOI: 10.17632/3v9nryvch9.1
title: Full and partial sub-pixel mapping of hydrothermally alteration zones associated with porphyry copper deposits 

description: This file include Cu ore indication in region under study
DOI: 10.17632/z3drbsc9ky.1
title: GBS screening on term pregnancies: cultural or PCR

description: Objectives: The aim of this study was to evaluate if screening Group B Streptococcus colonization by intrapartum polymerase chain reaction could improve intrapartum administration of antibiotic prophylaxis, compared with antepartum culture screening and analyze the sensitivity and specificity of polymerase chain reaction test.
Methods: 198 pregnant women with Group B Streptococcus colonization antepartum culture screening were included. When they arrived at hospital for delivery, two rectovaginal swabs were collected: for culture and polymerase chain reaction method.
Results: The rate of Group B Streptococcus colonization antepartum detected by culture was 16.7%; at delivery was 17.2% when detected by culture and 19.7% using polymerase chain reaction method. The rate of inconclusive polymerase chain reaction tests was 0.5%. Considering intrapartum culture screening as gold standard, sensitivity and specificity of polymerase chain reaction test for intrapartum Group B Streptococcus colonization was 97.1% and 95.7%, respectively. The global rate of discordance  between antepartum and intrapartum Group B Streptococcus colonization was 6.6%. The rate of women not treated with intrapartum antibiotic prophylaxis in the setting of positive intrapartum culture was significantly lower using intrapartum polymerase chain reaction test (0.5%) than with antepartum culture method (3.5%, p=0.035).
Conclusion: The use of intrapartum antibiotic prophylaxis can be more efficient when screening Group B Streptococcus colonization intrapartum by polymerase chain reaction test. Polymerase chain reaction method had a good performance in our study, with high sensitivity and specificity.
DOI: 10.17632/2w9bkcc6pz.1
title: Investigating the Role of Metabolic Reprogramming in the Pathogenesis of Diabetic Kidney Disease Using Novel Metabolic Mouse Models

description: Metabolic disorders are involved in the pathogenesis of diabetic kidney disease (DKD), and protein lipoylation may regulate metabolic disorders and energy reprogramming in DKD. To elucidate the role of protein lipoylation in metabolic regulation and understand its underlying mechanism, we used the Ins2Akita, a diabetic mouse model, crossed with lipoic acid synthase transgenic mice to illustrate the role of metabolic regulation at the initiation and early stages of DKD. We found that enhanced protein lipoylation attenuates the early DKD phenotype by analyzing renal albuminuria, glomerular mesangial expansion, and mitochondrial damage in proximal tubular epithelial cells as the LiasH/HIns2Akita/+ mice had markedly milder DKD phenotype than LiasL/LIns2Akita/+ mice via metabolic regulation by protein lipoylation. These data suggest that enhanced protein lipoylation potentially attenuates DKD by regulating metabolism and energy reprogramming. Our study provides insight into a new therapeutic strategy for DKD. 

The data included is high resolution mass spectrometry metabolomics raw data (generated on a Thermo Q Exactive HF-X). A processed peak list is also included along with metabolites that were identified in the samples.
DOI: 10.17632/hcc72wvf8v.1
title: TAK1 is an essential kinase for STING trafficking,Ma et al.

description:  data for MS Proteomics
DOI: 10.17632/d9vpm2g7cj.1
title: ijamscr

description: About the Journal
The journal is devoted to the promotion of Medical and related disciplines like, Dental, Clinical research, Nursing research, Physiotherapy research, Occupational therapy research, Pharmaceutical research, Biopharmaceutics, Pharmacokinetics, Pharmaceutical Medicinal Chemistry, Computational Chemistry & Molecular Drug Design, Pharmacognosy and Phytochemistry, Pharmacology, Pharmacy Practice, Clinical & Hospital Pharmacy, Cell Biology, Genomics and Proteomics, Pharmacogenomics, Bioinformatics including biotechnology, cell and molecular biology, Pharmaceutical biotechnology/microbiology, medical and other life sciences.

ISSN: 2347-6567

International Journal of Allied Medical Sciences and Clinical Research (IJAMSCR)seeks to foster multidisciplinary research and collaboration among Physicians, Nurses, Physiotherapist, scientists, pharmaceutical industries and healthcare sector as well as provide an international forum for the communication and evaluation of data, methods and opinions in medical sciences and related disciplines. The journal publishes research articles, review articles, short communications, case studies and reports. All manuscripts will be subjected to rapid peer review. Those of high quality not previously published and not already under consideration for publication will be published.
DOI: 10.17632/5v8934hwgw.1
title: Supplemental Data for JAAD-D-23-00657R2

description: Supplemental data for JAAD-D-23-00657
Kasperkiewicz et al, Risk of comorbid autoimmune diseases in patients with immunobullous disorders: A global large-scale cohort study, Journal of the American Academy of Dermatology
DOI: 10.17632/bjhzrw7pty.1
title: Li isotope compositions of hydrothermally altered sediments in the Iheya North Knoll of the middle Okinawa Trough

description: We reported the Li isotopic compositions (δ7Li) of background and hydrothermally altered sediments from IODP331 drilling cores in the Iheya North Knoll of the middle Okinawa Trough. The sediments, primarily altered from volcanic clasts, exhibits a pristine δ7Li value (5.2 ± 0.7 ‰) similar to that of MORB (3.7 ± 1 ‰). Intense hydrothermal activity led to the complete conversion of primary feldspars into phyllosilicates, predominantly Mg-chlorite, at site C0013 and in the middle and deep parts of C0014. The altered samples showed a depletion of 7Li (ranging from -10.0 ‰ to 4.2 ‰) compared to background sediment, indicating the preferential incorporation of 6Li during the formation of secondary minerals. Furthermore, hydrothermally impacted drilling sites exhibited increasing trends in δ7Li values with depth, with the deepest samples approaching the pristine δ7Li values. These trends were attributed to the significant thermal gradients present at both sites. Our data underscores the potential of Li isotopes as a novel geothermometer tool, although further calibration work is required.
DOI: 10.17632/dvjvjhbjtf.1
title: Vertical profiles of particle number size distribution and variation characteristics at the Eastern Slope of the Tibetan Plateau

description: An unmanned aerial vehicle (UAV) observation platform was obtained the first vertical of particle number size distribution (PNSD) from July 7 to 16, 2022, locate at the Eastern Slope of the Tibetan Plateau (ESTP), equipped with Portable Optical Particle Spectrometer (POPS) and meteorological sensors.
DOI: 10.17632/xphwz9npr8.1
title: Supplementary materials for "Comparison of treatment response to tetracyclines in patients with first- and second-generation epidermal growth factor receptor tyrosine kinase inhibitor-induced papulopustular eruptions A retrospective study"

description: # Supplementary table 1. Comparison of baseline PPE severity in cases with and without topical combination therapy
# Supplementary table 2. Comparison of treatment responses to minocycline and doxycycline at 4, 8, and 12 weeks of papulopustular eruption in the first-generation EGFR-TKIs group
DOI: 10.17632/xphwz9npr8.2
title: Supplementary materials for "Comparison of treatment response to tetracyclines in patients with first- and second-generation epidermal growth factor receptor tyrosine kinase inhibitor-induced papulopustular eruptions A retrospective study"

description: # Supplementary figure 1. Differences in the temporal tendency to tetracycline treatment response according to EGFR-TKI generation
# Supplementary figure 2. Comparison of treatment response to minocycline and doxycycline at 4, 8, and 12 weeks in patients with PPE
# Supplementary table 1. Comparison of baseline PPE severity in cases with and without topical combination therapy
# Supplementary table 2. Comparison of treatment responses to minocycline and doxycycline at 4, 8, and 12 weeks of papulopustular eruption in the first-generation EGFR-TKIs group
DOI: 10.17632/mg756z68hn.1
title: Food waste of Visiting Friends and Relatives Dataset

description: The research article “Referring the Food Waste by Over-Ordering Behavior in Visiting Friends and Relatives Sector on Behavioral Reasoning Theory in China” explores the food waste reduction from Visiting Friends and Relatives in China. Data were collected by outsourcing the sampling to WJX.cn, an online survey platform, and had 396 effective questionnaires from Mainland China. The survey company conducted a random sampling method following the requests and carried out the random sampling in its huge population database, like Toluna in the USA. The target populations are those who had entertained guests of visiting friends and relatives within 3 years. The questionnaire for survey has been tested for reliability and validity to ensure the appropriate measurements of constructs in the research model. A statistical modeling software of Mplus was applied to structural equation model (SEM) with dataset for confirmative factor analysis (CFA) and hypotheses examination. The outcomes indicated that the dataset fits to be repeatable research for the same or similar subjects.
DOI: 10.17632/m3t8wk8pt5.1
title: Nanoindentation study of calcium-silicate-hydrate gel via molecular dynamics simulations

description: The input script and modeling files of C-S-H for loading tests along x direction.
DOI: 10.17632/8xt33x3z9m.1
title: Original data-QXZKG against ALI

description: Integrated Network Pharmacology and Lipidomics to Reveal the Regulatory Effect of Qingxuan-Zhike Granule on Lipid Metabolism in LPS-Induced Acute Lung Injury (Lipidomics, Network Pharmacology, and Real time quantitive PCR)
DOI: 10.17632/zp58cm5kvx.1
title: Personalized requirement elicitation and evaluation for product service systems: A new hybrid method based on contextual matching

description: This is the supplementary data for our research "Personalized requirement elicitation and evaluation for product service systems: A new hybrid method based on contextual matching".
DOI: 10.17632/8hv44ffd6c.1
title: Supplementary material figures

description: Supplementary materials for Chronic exposure to environmentally relevant concentration of fluoride impairs osteoblast’s collagen synthesis and matrix mineralization: involvement of epigenetic regulation in skeletal fluorosis
DOI: 10.17632/cvd66cs5y2.1
title: B/Ca of synthetic aragonites

description: Supplementary data in support of 'B(OH)4-and CO32- do not compete for incorporation into aragonite under typical coral calcification media conditions', Castillo Alvarez et al., submitted to Geochimica et Cosmochimica Acta July 23
DOI: 10.17632/nnt7kwdr39.1
title: Determining shear wave velocity using artificial neural networks

description: A project to determine shear wave velocity using artificial neural networks. Python was used to build the model and 80 percent of the dataset used to train the data.

Multiple Regression, Keras Deep Learning framework was used to model the network. Sklearn with MLPRegressor was also used to build the model.

In end, the Multiple Linear Regression returned with a coefficient of determinaion of 0.44 and the Keras Deep Learning framework yielded a coefficient of determination of 0.39 along the MLPRegressor model

Note: The data file used to build this project has been uploaded, to try the model, please direct message me, duah229@gmail.com for the password to decrypt the file.
DOI: 10.5281/zenodo.8198494
title: Supporting information from Prospective environmental risk screening of seven advanced materials based on production volumes and aquatic ecotoxicity

description: Supporting information (Opne data) for the publication Prospective environmental risk screening of seven advanced materials based on production volumes and aquatic ecotoxicity
DOI: 10.5281/zenodo.8198493
title: Supporting information from Prospective environmental risk screening of seven advanced materials based on production volumes and aquatic ecotoxicity

description: Supporting information (Opne data) for the publication Prospective environmental risk screening of seven advanced materials based on production volumes and aquatic ecotoxicity
DOI: 10.17632/cngy9wfn7m.1
title: Applications of machine learning on alopecia areata: A systematic review

description: Supplementary material.
DOI: 10.17632/cngy9wfn7m.2
title: Applications of machine learning on alopecia areata: A systematic review

description: Supplementary material.
DOI: 10.17632/7smfyv5y53.1
title: Dataset23_Jupiter_PMachado

description: Dataset related to ESPRESSO/VLT Jupiter atmosphere's dynamics.
DOI: 10.5281/zenodo.8198504
title: Outside the Safe Operating Space of a New Planetary Boundary for Per- and Polyfluoroalkyl Substances (PFAS)

description: Supporting information (Open Data)m for the article Outside the Safe Operating Space of a New Planetary Boundary for Per- and Polyfluoroalkyl Substances (PFAS)
DOI: 10.5281/zenodo.8198503
title: Outside the Safe Operating Space of a New Planetary Boundary for Per- and Polyfluoroalkyl Substances (PFAS)

description: Supporting information (Open Data)m for the article Outside the Safe Operating Space of a New Planetary Boundary for Per- and Polyfluoroalkyl Substances (PFAS)
DOI: 10.17632/7w2v72dcmr.1
title: Sub-daily Discharge, Taivalkoski

description: Hourly discharge data from the Taivalksoki station (2015 to 2017)
DOI: 10.17632/hx7fdmvrd9.1
title: Microtremor Dataset 

description: This data is a collection of microtremor data from the Demak area, Indonesia
DOI: 10.17632/xn3dkjjjkj.1
title: Mendeley Supplemental Data: Perianal and anal skin cancers treated with Mohs micrographic surgery and interdisciplinary care

description: Mendeley Supplemental Data for the article "Perianal and anal skin cancers treated with Mohs micrographic surgery and interdisciplinary care: Local recurrence rates and patient-reported outcomes"
DOI: 10.17632/6wmz85wt5c.1
title: Chinese bioeconomy value added

description: This dataset includes: 
1: The data of input-output tables to measure the Chinese bioeconomy are taken from OECD statistics, which give relations between sectors from 1995 to 2018. 
2: The inflation data are taken from World Bank GDP deflator statistics.
3: The code to measure the bioeconomy value added.
DOI: 10.17632/w4pdfkwcc9.1
title: Dataset for the publication entitled "Comparative analysis for mechanical and thermal characterization of 3D printed polyamide using FFF, CFR, and SLS methods applying industrial and desktop printers"

description: Dataset for the publication entitled "Comparative analysis for mechanical and thermal characterization of 3D printed polyamide using FFF, CFR, and SLS methods applying industrial and desktop printers". Upon citation, please refer to the original article as well.