cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6046309
title: Avizo reconstruction of Bone-cracking Borophagus coprolite lacm:vp:158713

description: Borophagine canids have long been hypothesized to be North American ecological ‘avatars’ of living hyenas in Africa and Asia, but direct fossil evidence of hyena-like bone consumption is hitherto unknown. We report rare coprolites (fossilized feces) of Borophagus parvus from the late Miocene of California and, for the first time, describe unambiguous evidence that these predatory canids ingested large amounts of bone. Surface morphology, micro-CT analyses, and contextual information reveal (1) droppings in concentrations signifying scent-marking behavior, similar to latrines used by living social carnivorans; (2) routine consumption of skeletons; (3) undissolved bones inside coprolites indicating gastrointestinal similarity to modern striped and brown hyenas; (4) B. parvus body weight of ~24 kg, reaching sizes of obligatory large-prey hunters; and (5) prey size ranging ~35–100 kg. This combination of traits suggests that bone-crushing Borophagus potentially hunted in collaborative social groups and occupied a niche no longer present in North American ecosystems.
description: {"references": ["Wang et al. eLife 2018;7:e34773", "https://doi.org/10.7554/eLife.34773"]}
DOI: 10.5281/zenodo.6046308
title: Avizo reconstruction of Bone-cracking Borophagus coprolite lacm:vp:158713

description: Borophagine canids have long been hypothesized to be North American ecological ‘avatars’ of living hyenas in Africa and Asia, but direct fossil evidence of hyena-like bone consumption is hitherto unknown. We report rare coprolites (fossilized feces) of Borophagus parvus from the late Miocene of California and, for the first time, describe unambiguous evidence that these predatory canids ingested large amounts of bone. Surface morphology, micro-CT analyses, and contextual information reveal (1) droppings in concentrations signifying scent-marking behavior, similar to latrines used by living social carnivorans; (2) routine consumption of skeletons; (3) undissolved bones inside coprolites indicating gastrointestinal similarity to modern striped and brown hyenas; (4) B. parvus body weight of ~24 kg, reaching sizes of obligatory large-prey hunters; and (5) prey size ranging ~35–100 kg. This combination of traits suggests that bone-crushing Borophagus potentially hunted in collaborative social groups and occupied a niche no longer present in North American ecosystems.
description: {"references": ["Wang et al. eLife 2018;7:e34773", "https://doi.org/10.7554/eLife.34773"]}
DOI: 10.17632/wyzc35srpp.1
title: LINF_220020400

description: FK506-binding protein 1 | FKBPL1
Leishmania infantum (strain JPCM5)
DOI: 10.17632/xt8vk4n3mv.1
title: Dataset for Human Gait Analysis

description: Dataset Description:
Type: Video
Organization: each folder carries video of the same person named with similar 2 initial characters
Variations:
1. Gender: 14 male and 12 Female
2. Age (youths): between 20 and 25 (80%) 
3. Outfit: Conventional wears (western). Hijabs (full, half), kaftans (short and long)
3. load: bags (based of volunteers choice) varying holding style.
DOI: 10.17632/zryzyhsgv5.1
title: Body Ownership Illusion Questionnaire data

description: This raw data includes score of each question in five-point Likert scale and demographic information of the participants(updated the data included in experiment 2). The data was used in the study which tried to investigate the persistence of skin-based reference frame during the multisensory integration process in body ownership illusion. Synchronous visuotactile stimulation with spatial incongruence between vision and touch was provided in virtual reality to induce body ownership of the virtual hand. The intensity of body ownership illusion was measured to quantify the tolerance for spatial incongruence. The results showed anisotropic pattern in spatial incongruence tolerance which was interpreted to reflect the persistence of skin-based reference frame during visuotactile integration.
DOI: 10.17632/srt28t8r5m.1
title: Essential oils from Limnocitrus littoralis species in Southcentral coast of Vietnam

description: Volatile essential oils of seeds, peels, and leaves were obtained from Limnocitrus littoralis (Miq.) Swingle growing wildly in three provinces belonging to the southcentral coast of Vietnam by hydrodistillation method with 2000 mL Clevenger apparatus. Organoleptic properties, specific gravity, refractive index, and optical rotation were analyzed according to international standards ISO (International Organization for Standardization) or AFNOR (French Association of Normalization) standard, at 25 oC. The chemical compositions of essential oils were analysed by GC and GC/MS methods. Essential oil constituents were identified by comparing their mass spectra with those of standard compounds registered in the NIST 2014 and NIST 2020 libraries. Moreover, the identification was also confirmed by collating the observed LRI (linear retention indices) of each constituent with those reported in the compilation of retention indices published by Adams. The observed LRI was calculated by using the equation propounded by van den Dool and Kratz to the homologous series of C9-C20 n-alkanes (Sigma-Aldrich). The relative percentage of each constituent in the oil was determined by peak area normalization
DOI: 10.17632/bpm5bcjzbk.2
title: Data for: The psychological burden of routine prenatal ultrasound on women's state anxiety across the three trimesters of pregnancy

description: All data used for the study titled "The psychological burden of routine prenatal ultrasound on women's state anxiety across the three trimesters of pregnancy" are reported in an excel file.
DOI: 10.5281/zenodo.6045694
title: Summary Statistics from "Genetically regulated gene expression and proteins revealed discordant effects" (LWAS of biomarker)

description: Summary statistics of 92 blood protein levels. The corresponding publication is currently under revision. The zipped txt file is tab-delimited and contains the following columns: protein: protein name abbreviation cytoband: genomic region gene: gene name abbreviation setting: either "combined" (adj. for sex & age) or sex-stratified ("males", "females"; adj. for age) variant_id_hg19: SNP ID according to hg19 variant_id_hg38: SNP ID according to hg19 chr: chromosome pos_hg19: base position according to hg19 pos_hg38: base position according to hg19 effect_allele: also known as counted allele in additive model other_allele: not-counted allele eaf: effect allele frequency maf: minor allele frequency info: imputation info score n_samples: number of samples beta: effect estimate se: standard error zscore: Z-statistic pvalue: p-value FDR: FDR by gene and setting BBFDR: hierarchical FDR by setting hierFDR: TRUE if SNP is significant after hierarchical FDR
DOI: 10.5281/zenodo.6045693
title: Summary Statistics from "Genetically regulated gene expression and proteins revealed discordant effects" (LWAS of biomarker)

description: Summary statistics of 92 blood protein levels. The corresponding publication is currently under revision. The zipped txt file is tab-delimited and contains the following columns: protein: protein name abbreviation cytoband: genomic region gene: gene name abbreviation setting: either "combined" (adj. for sex & age) or sex-stratified ("males", "females"; adj. for age) variant_id_hg19: SNP ID according to hg19 variant_id_hg38: SNP ID according to hg19 chr: chromosome pos_hg19: base position according to hg19 pos_hg38: base position according to hg19 effect_allele: also known as counted allele in additive model other_allele: not-counted allele eaf: effect allele frequency maf: minor allele frequency info: imputation info score n_samples: number of samples beta: effect estimate se: standard error zscore: Z-statistic pvalue: p-value FDR: FDR by gene and setting BBFDR: hierarchical FDR by setting hierFDR: TRUE if SNP is significant after hierarchical FDR
DOI: 10.17632/2p9m5jzpzj.2
title: Optogenetic actuator/biosensor circuits for large-scale interrogation of MAPK signaling dynamics

description: Experimental data and R/Python scripts required to reproduce the figures from the accompanying publication: Dessauges et al. "Optogenetic actuator/biosensor circuits for large-scale interrogation of MAPK signaling dynamics".
DOI: 10.17632/sv4swfxdyj.1
title: Tracer test dataset conducted on Dinaric karst island aquifer

description: Tracer test was conducted by injecting Na-fluoresceine into a borehole located approximately in the center of the island Vis in the Adriatic Sea (Croatia). Only 0.4 kg of dye was used as the borehole is located at the “Korita” pumping site which is the only source of fresh water on the island. Dye was recovered only at nearby boreholes, although coastal springs were monitored for two months. The dataset includes recovered dye concentrations from two boreholes with a depth of approximately 150 meters. Their coordinates and map with all sampling locations are also provided. The purpose of the tracer test was for delineating the catchment of the “Korita” pumping site and determining the maximum apparent speed of the dye, as is required by Croatian legislation. Island Vis is composed mainly of karstified carbonate rocks and belongs to the Dinaric karst region, locus typicus for karst landforms. The provided information can be used for determining the hydraulic properties of its aquifer and for research of karst in general.
DOI: 10.17632/v7shygwnv2.1
title: LINF_220019700

description: farnesyl pyrophosphate synthase | FPPS
Leishmania infantum (strain JPCM5)
DOI: 10.17632/pfbdxsfvgt.2
title: Open-source syringe extrusion head for shear-thinning materials 3D printing

description: This dataset is linked to the Rapid Prototyping Journal article (https://doi.org/10.1108/RPJ-09-2021-0245). 

Abstract
Purpose: This article reports the development of an open-source syringe extrusion head for shear-thinning materials, aiming to adapt open-source 3D printers to be helpful in research lines that use gels, hydrogels, pastes, inks, and bio-inks.
Design/methodology/approach: This hardware was designed to be compatible with a Graber i3-based 3D printer; nevertheless, it can be easily adapted to other open-source 3D printers.
Findings: The extrusion head successfully deposits the material during the 3D printing process. It was validated fabricating geometries that include scaffold structures, which are a possible application of bioprinting for tissue engineering. As reported, the extruded filaments allowed the porous samples' structuration.
Practical implications: This system expands the applications of open-source 3D printers used at the laboratory scale. It enables low-cost access to research areas such as tissue engineering and biofabrication, energy storage devices, and food 3D printing.
Originality: The open-source hardware here reported is of simple fabrication, assembly, and installation. It uses a Cardan coupling and a three guides system to transfer the stepper motor motion. This approach allows continuous movement transfer to the syringe piston, producing an adequate deposition or retraction. Thus, the effect of misalignments is avoided, considering that these latter can cause skipping steps in the motor, directly affecting the deposition.
DOI: 10.17632/yhwnfhrfp9.1
title: In-situ versus ex-situ x-ray diffraction (XRD) study of the early hydration of Portland cements containing calcium carbonate

description: In Gonçalves et al. we compare the phase evolution during the hydration of two commercial Portland cements using x-ray diffraction (XRD). The cementitious pastes were characterized with different hydration ages (from 1 hour to 28 days) and the results of the in-situ technique were compared with the conventional ex-situ method. Complementary standardized thermogravimetry analysis (TGA) was performed, and the results related to the evolution of phases.
DOI: 10.17632/rd9kc7pb83.1
title: Make up products’ trace elements content development of an analytical method and toxic effect in selected cosmetics in the Italian market

description: A new method for the determination of five trace metals (Pb, Co, Cd, Cr and Ni) in make-up products was developed. Pb content was measured by F-AAS, while the quantification of Cd, Co, Cr, and Ni was performed by ICP-MS. 90 cosmetic products were analysed and only Pb and Cd were always lower than metals limits for cosmetic products, proposed by ISS. The metal concentrations found allowed to evaluate the risk levels of exposure to these elements. Except for a few cases, the calculated margin of safety MOS, MOE and LCR values were all below the risk threshold levels. Based on the maximum concentrations of metals determined in cosmetic samples, the SED ranged from 8.00x10-12 to 3.39x10-7 mg/kg/d. The risk was also described from the HI. Except MOE of Cr in eyeshadow, the metals in each cosmetic product show an MOE higher than the threshold limit. The EDI due to exposure to Cr, Pb, Co and Ni for average users in the lipstick products were evaluated. The EDI values were compared to the ADI to calculate the RII (%). For Pb, Co and Ni the RII (%) were 0.01-0.21, 0.00-0.05 and 0.06 %, respectively. Therefore, the metal concentrations in lip cosmetic products do not reveal potential public health concerns.
DOI: 10.17632/f6zszzhhm6.1
title: Green Technology

description: paper about green technology, market orientation and green performance
DOI: 10.17632/h4myhp5hkd.2
title: Preterm newborn adaptive responses to daily nursing, during NICU stay, associate with the neurodevelopment, two years later

description: All data used for the study titled "Preterm newborn adaptive responses to daily nursing, during NICU stay, associate with the neurodevelopment, two years later" are reported in an excel file.
DOI: 10.17632/pw339snbvs.1
title: Survey Data on Farmers Awareness, Perception level towards futures market

description: Price risk is one of the major source of risk faced by all farmers. This data set captures  the information sources used by the farmers for taking pricing decisions. A survey was carried out with 314 Chillies farmers at Ramanathapuram District of TamilNadu, 383 Turmeric Cultivators in the Erode District of TamilNadu and 221 Cardamom growers in Theni District of TamilNadu. The awareness level and perception towards commodity futures market and farmers preference towards usage of marketing alternatives in selling their produce were recorded in the dataset. The dataset in in MS-Excel format.
DOI: 10.17632/wrhr5862cb.2
title: Data PROM Baseline

description: The data include the first assessment (before the initial treatment) of patient-reported outcomes (PROs) in ambulatory patients who visited the breast cancer center at Charité – Universitätsmedizin Berlin between November 2016 and March 2021. 1727 ambulatory patients with early breast cancer, ductal carcinoma in situ (DCIS), fibroadenoma, and other breast diseases were registered in the digital PRO-system as part of clinical routine. Patients’ sociodemographic data, medical history, clinical variables, and scores of the EORTC QLQ-C30 and EORTC QLQ-BR23 are provided in this dataset.
The assessment was performed electronically on tablet computers in the waiting area of the outpatient clinic. All surveys were provided in German via a web-based PRO-system (Heartbeat Medical). The questionnaires included PROs (EORTC QLQ-C30 and EORTC QLQ-BR23) and anamnesis (medical history and sociodemographic data). The anamnestic dataset, which was obtained via questionnaire, includes a version of the ICHOM breast cancer standard set that has been modified to German standards by the study group. Additional clinical data were documented afterwards in the PRO system by doctoral students or student assistants based on medical files.
The inclusion criteria for this dataset were as follows: 
-	Patients with a diagnosis of breast cancer, DCIS, fibroadenoma, or other breast diseases
-	Age 18 or over
-	German speakers
The exclusion criteria were as follows:
-	Non-eligible diagnosis
-	Diagnosis date after March 31, 2021
-	Missing diagnosis or diagnosis date
-	Diagnosis changed into a non-eligible diagnosis type (e.g., diagnosis date > 7 days after initial survey
-	First survey after treatment initiation
-	Second opinion
Most of the patients did not know their definitive diagnosis before the assessment of PROs and before the start of their initial treatment. If patients were diagnosed with more than one breast disease, they were labeled according to the following algorithm: breast cancer/DCIS>fibroadenoma>other breast diseases. Patients who were not treated at the Charité and only visited the outpatient clinic for a second were excluded.
DOI: 10.17632/k6k9c246nh.1
title: Evaluación masiva y espectacularización mediática del resultado: de cómo mentir con estadísticas y fabricar el fracaso escolar

description: El artículo describe efectos estratégicos que conectan la evaluación masiva con sistemas de información, producción, consumo y gobierno no solo de la educación sino de las poblaciones a las que esta práctica va dirigida. Bosqueja también una mirada crítica sobre las fuerzas que utilizan la evaluación como sofisma publicitario y como instrumento capaz de modular su propia espectacularización mediática, para ello acude a un doble archivo: material de prensa y trabajo investigativo especializado.
DOI: 10.17632/278fy5m2yj.2
title: CITE-seq - MS Twin Study

description: We performed single-cell transcriptome, surface proteome and TCR analyses using 10X Chromium Single Cell Immune Profiling Solution (5’ approach) with feature barcoding. We successfully sequenced 8 selected twin pairs discordant for MS (16 individuals in total) + 2 additional healthy MS Twins. This allowed us to pair the high-throughput CyTOF data from 116 Twin samples with a high-resolution map of highly multiplexed surface protein expression and an unbiased in-depth analysis of the transcriptome (single-cell indexing of transcriptomes and epitopes: CITE-seq).

Sequencing raw data and processed gene expression data have been deposited into the GEO repository under the accession numbers GSE193181.
DOI: 10.25345/c5vg50
title: MassIVE MSV000088822 - Deep single-cell type proteome profiling of mouse brain by nonsurgical AAV-mediated proximity labeling
title: Proteome profiling is a powerful tool in biological and biomedical studies, starting with samples at bulk, single cell, or single cell type levels. Reliable methods for extracting specific cell type proteome are in need, especially for the cells (e.g., neurons) that cannot be readily isolated. Here, we present an innovative proximity labeling (PL) strategy for single cell type proteomics of mouse brain, in which TurboID (an engineered biotin ligase) is used to label almost all proteins in a specific cell type. This strategy bypasses the requirement of cell isolation and includes five major steps: (i) constructing recombinant adeno-associated viruses (AAV) to express TurboID driven by cell type-specific promoters, (ii) delivering the AAV to mouse brains by direct intravenous injection, (iii) enhancing PL labeling by biotin administration, (iv) purifying biotinylated proteins followed by on-bead protein digestion, and (v) quantitative tandem-mass-tag (TMT). We first confirmed that TurboID can label a wide range of cellular proteins in human HEK293 cells and optimized the single cell type proteomics pipeline. To analyze specific brain cell types, we generated recombinant AAVs to express TurboID-mCherry fusion proteins, driven by neuron- or astrocyte-specific promoters, and validated the expected cell expression by co-immunostaining of mCherry and cellular markers. Subsequent biotin purification and TMT analysis identified ~10,000 unique proteins from a few micrograms of protein samples with excellent reproducibility. Comparative and statistical analysis indicated these PL proteomes contain cell type specific cellular pathways. Although proximity labeling was originally developed for studying protein-protein interactions and subcellular proteomes, we extend it to efficiently tag the entire proteomes of specific cell types in the mouse brain using TurboID biotin ligase. This simple, effective in vivo approach should be broadly applicable to single cell type proteomics.
DOI: 10.17632/3s8sr9zth9.2
title: e+shots study

description: E+shots study
DOI: 10.17632/kc9v27z38f.1
title: La aplicación de las pruebas de Estado en la educación superior colombiana: oportunidades y riesgos en tres años recorridos

description: Observar detenidamente cómo surgen los procesos evaluativos, hacerse preguntas acerca de lo que los antecede y precede; interrogarse por las oportunidades y por los riesgos que hay en juego en tan particulares  despliegues,  así  como  cuestionarse  por  las  características  del  proceso  evaluativo,  permite  que  la sociedad o el grupo que es afectado directa o indirectamente por la evaluación, relativice posturas y juicios y valore los aspectos cualitativos en juego para la toma de decisiones
DOI: 10.17632/3zkkxcg545.1
title: Endoscopic ultrasound plus elastrography predicting periarterial divestment technique for pancreatic adenocarcinoma wirh arterial contact

description: This data contains the dataset for the manuscript: The indemnity of the plane III of Inoue evaluated by endoscopic ultrasound and elastography could predict a periarterial divestment technique in borderline resectable (BR) or locally advanced (LA) pancreatic adenocarcinoma. A preliminary report from a European reference centre. There are no reports in the literature regarding the role of EUS-EG in exploring the indemnity of Inoue&#39;s plane III and its correlation with the periarterial divestment technique feasibility. Our pilot study aims to explore the role of EUS-EG in this scenario. This dataset consists of population data, clinical, radiological and pathological characteristics, of 4 eligible patients after inclusion/exclusion criteria. from Hospital Universitari Vall d'hebron. Universitat Autonoma de Barcelona.
DOI: 10.17632/k35hj5zrw2.1
title: Educación y comunicación masiva: los Ecaes según la prensa escrita

description: Los medios de comunicación desempeñan un papel clave en las representaciones que los grupos sociales hacen del mundo. De ello que sea plausible proponer una caracterización del tratamiento dado por algunos diarios y revistas al tema de los Ecaes. Esta caracterización destaca aspectos como la frecuencia con que es referido el tema, las fuentes periodísticas, los géneros utilizados y las formas de designarlo y valorarlo. En su conjunto, estos aspectos –motivo de este trabajo– dan pistas sobre qué tanta visibilidad y
de qué tipo los medios han dado a los Ecaes.
DOI: 10.17632/cvbp364ssn.1
title: Contributing Factors to the Development of Shared Understanding within Football Teams

description: Shared understanding is defined as two or more people thinking similarly in specific situations (Blickensderfer et al. 2010). Various factors have been stated to be crucial to the development of shared understanding within team sports like football, facilitating accurate prediction the actions and enabling an effective team performance. This research considered the perspectives of Scottish youth, amateur and junior male football players to outline contributing factors to the development of shared understanding within football teams. These perspectives were gathered through semi-structured interview approach, transcribed, and then analyzed through thematic analysis (Braun and Clarke 2019). Participants suggested that a combination of experience performing together, social cohesion and effective methods of communication were crucial for developing shared understanding between players which facilitates accurate prediction of actions, leading to a coordinated performance. These findings outline the importance of a combination of contributing factors to the development of shared understanding within football teams.