cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17026/dans-zru-cxgg
title: Zandwingebied Ameland west Totaal
title: Archeologisch bureauonderzoek en Inventariserend veldonderzoek

description: &lt;p&gt;In opdracht van- en in samenwerking met Rijkswaterstaat Zee en Delta heeft Periplus Archeomare BV een bureauonderzoek en een inventariserend veldonderzoek opwater fase uitgevoerd voor het potentiële zandwingebied Ameland west Totaal op de Noordzee.&lt;br&gt;Het bureauonderzoek heeft uigewezen dat in het plangebied historische scheeps- en vliegtuigwrakken kunnen voorkomen. De aanwezigheid van in situ prehistorische bewoningresten kan niet worden uitgesloten.&lt;br&gt;In het plangebied zijn op elf locaties side scan sonarcontacten waargenomen die een obstakel kunnen vormen tijdens de zandwinning. Dit geldt in het bijzonder voor de drie contacten weergegeven in onderstaande tabel. Geen van de waargenomen contacten betreft, voor zover aan de sonarbeelden kan worden beoordeeld, behoudenswaardige archeologische resten.&lt;/p&gt;&lt;p&gt;In de plangebieden kunnen wrakresten aan het licht komen die tot op heden volledig zijn afgedekt door sediment, of niet als archeologisch object zijn herkend tijdens het geofysisch onderzoek. Als dergelijke objecten tijdens de zandwinning boven water komen is de uitvoerder conform de Monumentenwet verplicht de vondsten te melden bij de bevoegde overheid. Deze meldingsplicht voor archeologische vondsten dient in het bestek of Plan van Aanpak van het werk te worden opgenomen.&lt;br&gt;De beschibaarheid van geologische gegevens van het gebied (boorgegevens, literatuur) was te beperkt om de verwachting voor prehistorische resten voldoende te kunnen specificeren. Het verdient aanbeveling om de resultaten van onderzoeken die - naar verwachting - voorafgaand de zandwinning zullen worden uitgevoerd (zoals magnetometer, subbottom profiling en/of grondboringen) te gebruiken voor een aanvullende analyse&lt;/p&gt;
DOI: 10.3535/3yw-p2b-26b
title: Delias rothschildi Holland, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ww7-pwc-wc1
title: Aglais io (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6h8-q66-mxs
title: Araschnia levana (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h0g-nl1-1rl
title: Mynes doubledaii Wallace, 1869

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zru-e6qz
title: PAN-00073111 - double symmetric shoe buckle with two oval looped frames: small

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00073111&lt;/p&gt;
description: Modified: 2020-09-01T11:59:33+02:00
DOI: 10.3535/wz1-1hh-lxw
title: Appias paulina (Cramer, [1777] )

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gvr-5z3-yt2
title: Araschnia levana (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ve7-rt3-ds1
title: Araschnia prorsoides (Blanchard, 1871)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zru-etee
title: Nes, Binnendieken, Gemeente Ameland (Fr.)

description: &lt;p&gt;Op 2 juli 2019 is in plangebied Binnendieken te Nes (Ameland) een inventariserend archeologisch onderzoek (verkennende fase) uitgevoerd. De aanleiding voor het onderzoek is de geplande bouw van woningen op het perceel. Volgens de richtlijnen van de FAMKE zijn zes boringen op het 0,25 hectare grote terrein geplaatst, waardoor een gemiddelde boordichtheid van 24 boringen per hectare is gehaald. Het doel van het onderzoek is om vast te stellen wat de kans is op de aanwezigheid van archeologische waarden. Het inventariserend onderzoek bestaat uit een bureauonderzoek en een veldonderzoek, verkennende fase (IVO-O). Bij het bureauonderzoek zijn bronnen geraadpleegd op het gebied van fysische geografie, archeologie en historische geografie. Het plangebied bevindt zich ten westen van de historische kern van het dorp Nes. Er zijn geen vondstmeldingen of meldingen van archeologische terreinen bekend uit het plangebied. Tijdens het veldwerk bleek de bodem redelijk intact te zijn, met uitzondering van boringen 5 en 6 die tot 70 centimeter diepte zijn vermengd. In de bouwvoor zijn archeologische indicatoren gevonden, maar deze dateren alle in de midden tot late nieuwe tijd, mogelijk zelfs uit de twintigste eeuw. Er zijn geen resten van funderingen of cultuurlagen in de boringen waargenomen. Ook zijn er geen vondstconcentraties aangetroffen. De kans is zeer gering dat het hier om een archeologische vindplaats gaat.&lt;/p&gt;&lt;p&gt;Selectie-advies door senior KNA-prospector drs. C. Tulp Op basis van de afwezigheid van oude archeologische indicatoren en de afwezigheid van cultuurlagen of een overstoven oude bouwvoor, achten wij de kans op de aanwezigheid van archeologische waarden in plangebied Binnendieken zeer klein. Wij adviseren geen archeologisch vervolgonderzoek voor dit terrein. Wij wijzen erop dat indien bij de uitvoering van werkzaamheden op het perceel onverhoopt toch archeologische grondsporen worden aangetroffen en/of vondsten worden gedaan, dan dient hiervan direct melding te worden gemaakt conform de Erfgoedwet 2015, artikel 5.10 & 5.11. Wij adviseren dit te doen bij de gemeente Ameland. Wij stellen voor de gedane vondsten te deselecteren. De provincie Fryslân beslist hierover. De provincie heeft laten weten dit advies te volgen.&lt;/p&gt;&lt;p&gt;De gemeente Ameland volgt dit selectie-advies (email d.d. 17 september 2019).&lt;/p&gt;
DOI: 10.3535/dzn-kws-jwk
title: Euploea diocletia Godart, 1819

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qke-sa5-mm1
title: Euphydryas Scudder, 1872

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/607-ab0-06k
title: Delias rothschildi Holland, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pmt-fk5-6bp
title: Danaus (Salatura) genutia (Cramer, 1779)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zru-ewyb
title: Industrielaan, Scherpenzeel

description: &lt;p&gt;Onderzoeksrapport&lt;/p&gt;
description: Date: 2010-06-15 (veldwerk)
DOI: 10.3535/fwm-s02-bqc
title: Charaxes Ochsenheimer, 1816

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ejr-da7-p7r
title: Papilio helenus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hlp-qdd-ra4
title: Mycalesis sudra Felder, 1867

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7lb-nzp-n00
title: Araschnia levana (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tnh-d18-rfn
title: Mycalesis Hübner, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zru-g48c
title: PAN-00124180 - wall fragment (glass vessel)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00124180&lt;/p&gt;
description: Modified: 2023-02-15T13:51:17+01:00
DOI: 10.3535/5cx-fzt-a7a
title: Danaus (Anosia) chrysippus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/284-663-8bd
title: Papilio alexanor Esper, 1800

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z8b-ks6-5tm
title: Danaus (Anosia) chrysippus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17026/dans-zru-g6t7
title: PAN-00077802 - eye brooch

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00077802&lt;/p&gt;
DOI: 10.3535/82y-qdj-alh
title: Delias crithoe (Boisduval, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c8v-82v-dxl
title: Araschnia burejana Bremer, 1861

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gq8-tnf-cq9
title: Prioneris

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.14052291
title: Discrimination Study_ILD_Group_Raw Data
DOI: 10.5281/zenodo.14052290
title: Discrimination Study_ILD_Group_Raw Data

description: The updated version of ILD (Interaural Level Difference) training group experimental data from Binaural-Cue Reweighting Induced by Discrimination Training have been uploaded, accompanied by a README files that describes the data attributes for PreTraining followed by Assessment (Pre/Posttest) and Training.
DOI: 10.5281/zenodo.15184252
title: Discrimination Study_ILD_Group_Raw Data

description: The updated version of ILD (Interaural Level Difference) training group experimental data from Binaural-Cue Reweighting Induced by Discrimination Training have been uploaded, accompanied by a README files that describes the data attributes for PreTraining followed by Assessment (Pre/Posttest) and Training.
DOI: 10.15468/dl.ws9arx
title: Occurrence Download

description: A dataset containing 72350 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((117 38,118 38,118 40,117 40,117 38))"
 ]
}

 The dataset includes 72350 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013487-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6euagh
title: Occurrence Download

description: A dataset containing 9764 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Apalone ferox (Schneider, 1783)"
 ]
}

 The dataset includes 9764 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000541-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4x2dvt
title: Occurrence Download

description: A dataset containing 656 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Specimen)",
 "TaxonKey is Micronycteris microtis Miller, 1898",
 "Year 1970-2025"
 ]
}

 The dataset includes 656 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000540-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5592451
title: Data from: Complex population structure and haplotype patterns in Western Europe honey bee from sequencing a large panel of haploid drones

description: This vcf file contains 7.023.689 SNPs and 870 honey bee samples, as described in the paper "Complex population structure and haplotype patterns in Western Europe honey bee from sequencing a large panel of haploid drones" by Wragg et al., available at https://doi.org/10.1101/2021.09.20.460798 as preprint.


Eight hundred and seventy haploid drone samples from several honey bee subspecies hybrids were sequenced and aligned to the HAv3.1 reference genome. Sequence read alignment and genotyping quality filters were used to obtain a selection of 7.023.689 high-quality SNPs. The file Diversity_Study_629_Samples.txt corresponds to the 629 unique samples that were used for the diversity study described in the paper and can be used to recreate the restricted diversity dataset using bcftools or an equivalent software.


Having sequenced haploid drones, heterozygous SNPs resulting from duplicated regions could be filtered out and the data is phased.
DOI: 10.5281/zenodo.5592452
title: Data from: Complex population structure and haplotype patterns in Western Europe honey bee from sequencing a large panel of haploid drones

description: This vcf file contains 7.023.689 SNPs and 870 honey bee samples, as described in the paper "Complex population structure and haplotype patterns in Western Europe honey bee from sequencing a large panel of haploid drones" by Wragg et al., available at https://doi.org/10.1101/2021.09.20.460798 as preprint.


Eight hundred and seventy haploid drone samples from several honey bee subspecies hybrids were sequenced and aligned to the HAv3.1 reference genome. Sequence read alignment and genotyping quality filters were used to obtain a selection of 7.023.689 high-quality SNPs. The file Diversity_Study_629_Samples.txt corresponds to the 629 unique samples that were used for the diversity study described in the paper and can be used to recreate the restricted diversity dataset using bcftools or an equivalent software.


Having sequenced haploid drones, heterozygous SNPs resulting from duplicated regions could be filtered out and the data is phased.
DOI: 10.15468/dl.rh5v7m
title: Occurrence Download

description: A dataset containing 724 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Specimen)",
 "TaxonKey is Molossops Peters, 1866",
 "Year 1970-2025"
 ]
}

 The dataset includes 724 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000542-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15472/cwrg3e
title: Artrópodos de los Parques Distritales Ecológicos de Montaña

description: En este recurso, El Grupo de Monitoreo de la Biodiversidad de la Secretaría Distrital de Ambiente –SDA, adscrito a la Subdirección de Ecosistemas y Ruralidad, presenta un consolidado de los registros biológicos de artrópodos, producto del monitoreo de biodiversidad realizado a los Parques Distritales Ecológicos de Montaña: Entre Nubes, La Serranía de Zuqué (anteriormente denominado Área de interés Ambiental), Soratama y Mirador de los Nevados (anteriormente denominado Aula Ambiental) para el 2021, 2022 y 2023. En este se incluye información del grupo biológico, registrados en áreas administradas por la SDA ubicadas en los Cerros Orientales y demás ecosistemas de montaña que presenta el Distrito. Dentro de los resultados obtenidos se tiene para el grupo de atropados un registro total de siete clases, 28 órdenes y 150 familia.
DOI: 10.15468/dl.kj8k6p
title: Occurrence Download

description: A dataset listing the 540 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((13.27511 -15.1624,13.05728 -15.65239,13.1904 -16.41999,14.1706 -16.60562,14.90878 -15.90858,14.58205 -15.24414,14.23111 -15.11567,13.27511 -15.1624))",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is LC",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 540 records were derived from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000539-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8773j
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isatis platyloba Link ex Steud."
 ]
}

 The dataset includes 217 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000546-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.89ghyg
title: Occurrence Download

description: A dataset containing 25335 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "OccurrenceStatus is Present",
 "TaxonKey is Acer negundo L."
 ]
}

 The dataset includes 25335 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000547-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ccvqkj
title: Occurrence Download

description: A dataset containing 1947 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Grampus griseus (G.Cuvier, 1812)"
 ]
}

 The dataset includes 1947 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000548-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18742/28165628.v1
title: English rural district house-building 1919-1974 dataset, with rural-urban comparative data 1945-1974

description: This dataset provides information for the analysis of rural housing, rural-urban comparisons in housing and leadership within local government. The material provided covers services and actions associated with the provision and maintenance of housing, such as land-use planning, sewerage and water services, house building finance, dwelling improvement and modernisation, slum clearance, overcrowding, under-occupation, second homes, caravans, homes for employees, civilian accommodation in military huts and camps, labour and materials supply, dwelling costs and cost yardsticks, building consortia, building by direct labour forces, non-traditional building methods, new and expanding towns, prefabricated dwellings, flats and bungalows, temporary dwellings, waiting lists, tenant selection, council regulation of tenants, the regulation of private landlords, and issues of geographical distribution nationally, within regions and within localities. The dataset focuses on 17 rural districts, with seven explored over the time period 1900-1974 (primarily 1919-1974) and a further 10 for 1945-1974, for which period a large body of statistical data are available on many aspects of housing conditions and supply, along with local socioeconomic conditions, for all 1,165 local authorities in England (as existed in 1971, with the data covering 1945-1973). The period focused on is before the huge middle-class inflows into the countryside that have since occurred; where the primary issue in rural housing was poor quality and insufficient supply at acceptable standards. A central resource in the dataset is insight on the provision of social housing, for those unable to afford house purchases. Key insights are embedded on local leadership and central-local government relations. For 13 rural districts, the dataset has substantive information from county record offices on council decisions, decision rationale and indicators of decision outcomes. There are complementary insights from newspaper accounts of council actions, both for these 13 and for a further four rural councils, along with material from Medical Officer of Health reports. The rural districts in the detailed 13 council focus are: Ampthill and Biggleswade (both Bedfordshire), Braughing and Hatfield (Hertfordshire), Elham and West Ashford (Kent), Erpingham, Smallburgh and Walsingham (Norfolk), Richmond and Settle (North Yorkshire) and Dorking & Horley and Godstone (Surrey), with less detailed supplementary information on Sturminster and Wimborne & Cranborne (Dorset) and Droitwich and Evesham (Worcestershire). This material is supplemented with extensive coverage of national government decision-making as revealed in files in The National Archives, alongside coverage of national (and rural) debates on housing, with considerable statistical information accompanying this, from House of Commons Hansard reports.
DOI: 10.5281/zenodo.15073136
title: Multi-sample snATAC-seq/snRNA-seq benchmarking datasets

description: Benchmarking Datasets used in:

Weinand et al., Defining effective strategies to integrate multi-sample single-nucleus ATAC-seq datasets via a multimodal-guided approach, In Prep.

 

Multiome (snATAC-seq + snRNA-seq) Dataset information:






Benchmarking Dataset



Original Study



Source



Cell Phenotype



Cell Count



Sample Count





1



Weinand et al., Nat Commun, 2024



RA & OA inflammatory tissue



Broad cell types



31,547



12





2



Weinand et al., Nat Commun, 2024



RA & OA inflammatory tissue



T cell states



8,069



11





3



Weinand et al., Nat Commun, 2024



RA PBMC



T cell substates



10,669



2 runs of 4 pooled samples each





4



Cheong et al., Cell, 2023



COVID-19 & healthy PBMC



Broad cell types



197,360



30





5



Cheong et al., Cell, 2023



COVID-19 & healthy PBMC



HSPC states



27,979



28





 

Data provided per Dataset:

inputs: All inputs for our command-line tool: https://github.com/immunogenomics/snATAC_benchmark/

outputs: Selected outputs from our tool, namely embeddings, NN metrics, LISI metrics, and UMAP coordinates for all dataset, feature, method, and correction combinations

UMAPs: UMAP plots for use in our website: https://immunogenomics.io/snATAC_benchmark/

 

Note: dataset4 inputs were too big to upload in one zip file, so they were uploaded in four zip files.
DOI: 10.5281/zenodo.15073137
title: Multi-sample snATAC-seq/snRNA-seq benchmarking datasets

description: Benchmarking Datasets used in:

Weinand et al., Defining effective strategies to integrate multi-sample single-nucleus ATAC-seq datasets via a multimodal-guided approach, In Prep.

 

Multiome (snATAC-seq + snRNA-seq) Dataset information:






Benchmarking Dataset



Original Study



Source



Cell Phenotype



Cell Count



Sample Count





1



Weinand et al., Nat Commun, 2024



RA & OA inflammatory tissue



Broad cell types



31,547



12





2



Weinand et al., Nat Commun, 2024



RA & OA inflammatory tissue



T cell states



8,069



11





3



Weinand et al., Nat Commun, 2024



RA PBMC



T cell substates



10,669



2 runs of 4 pooled samples each





4



Cheong et al., Cell, 2023



COVID-19 & healthy PBMC



Broad cell types



197,360



30





5



Cheong et al., Cell, 2023



COVID-19 & healthy PBMC



HSPC states



27,979



28





 

Data provided per Dataset:

inputs: All inputs for our command-line tool: https://github.com/immunogenomics/snATAC_benchmark/

outputs: Selected outputs from our tool, namely embeddings, NN metrics, LISI metrics, and UMAP coordinates for all dataset, feature, method, and correction combinations

UMAPs: UMAP plots for use in our website: https://immunogenomics.io/snATAC_benchmark/

 

Note: dataset4 inputs were too big to upload in one zip file, so they were uploaded in four zip files.
DOI: 10.15468/dl.bhrwgr
title: Occurrence Download

description: A dataset containing 1786 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "TaxonKey is one of (Magnolia Plum. ex L.)"
 ]
}

 The dataset includes 1786 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000549-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.