cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14006142
title: Equation of State, Structure, and Transport Properties of Iron Hydride Melts at Planetary Interior Conditions dataset

description: Datasets from https://doi.org/10.1029/2024JE008525

"Equation of State, Structure, and Transport Properties of Iron Hydride Melts at Planetary Interior Conditions"

Emma R. Stoutenburg1, Razvan Caracas2, Natalia V. Solomatova3, and Andrew J. Campbell1

1Department of the Geophysical Sciences, University of Chicago, Chicago, IL, USA, 2 Université Paris Cité, Institut de Physique du Globe de Paris, CNRS, 1 rue Jussieu, Paris, France, 3CNRS, Ecole Normale Supérieure de Lyon, Laboratoire de Géologie de Lyon LGLTPE UMR5276, Centre Blaise Pascal, Lyon, France

--- 

Please make sure you download data from the 30 October, 2024 version.  

--- 

ds01.xlsx

Contains pressure, density, volume, and temperature of the main dataset discussed in the paper (10 and 100 GPa). Also included are the diffusivities of iron and hydrogen in units of m2/s, viscosity in units of Pa⋅s, average Fe-Fe and Fe-H coordination numbers and bond lengths, as well as the molecular hydrogen abundance and the average number of Fe in H1, H2, and H3 clusters. Nominal pressures, Pnom are provided as these data were generalized within the text; their actual pressure, Pavg, are provided as well. (v1 vs v2: viscosity columns ([visc_Pas, visc_std] were updated, as a typo was discovered in the calculation of viscosity and it was a factor of 1/3 too small; May 2024: added molecular hydrogen data; October 2024, viscosity updated to include a neglected factor of 1/2).

ds02.xlsx

Contains all the data used in fitting the equation of state (v1-2 vs May 2024: P<10 GPa added to equation of state fit). The first sheet includes the molar volume, temperature, pressure (P), the magnetism corrected pressure (P_magcor115), and the residuals from the equation of state fits (both Birch Murnaghan and Vinet). The second sheet includes the comparison of spin polarized and non-spin polarized pressure in the iron hydrides at ~1 GPa. The third sheet includes the comparison of spin polarized and non-spin polarized pressure in pure iron. 

FeH-EOS_XfromrhoPT.py

added in Oct 2024 update, a simple python function that estimates the hydrogen content of an Fe-H melt with a given density, pressure, and temperature
DOI: 10.6073/pasta/c785236df1efdb62ad46664329184eba
title: Survey of dissolved inorganic carbon (DIC) and dissolved oxygen (DO) along the Duplin River in 2014

description: A transect measure of inorganic carbon and oxygen level at 12 equidistant stations along the Duplin Rvier were conducted at sunrise, sunset and next sunrise for each season in 2014 in order to estimate the air-water exchange, longitudinal mixing and metabolism of the Duplin River ecosystem.
DOI: 10.6073/pasta/170c6db512991d4c8152cd81877d4b62
title: Archaeological shovel test data for Little Sapelo Island, Mary Hammock, Patterson Island, and Pumpkin Hammock; Spring 2007, Summer 2007 and 2008

description: The purpose of this study was to determine the human occupational history of Little Sapelo Island, Mary Hammock, Patterson Island, and Pumpkin Hammock in McIntosh County, GA. During the Spring of 2007 and Summers of 2007 and 2008, a systematic archaeological shovel test survey was performed at a closely-spaced interval of 20 meters. The shovel test grid was laid out using a Trimble GPS, in accordance with the Universal Trans Mercator coordinate system Zone 17, and the North American Datum of 1927 (with a typical accuracy between 1 and 6 m). Teams of two people would go to these locations, dig holes (typically 50 cm in diameter and 1 m deep), and put the soil through wire hardware cloth with a mesh size of 0.6 cm (i.e., 0.25 inch). All cultural material (except shell) were collected and put in labeled plastic bags. Only some shell samples were kept for future analysis. Ceramics were classified to determine surface treatment/ decoration, temper, and rim form, with the ultimate goal of determining their period of use. All of the data related to these shovel tests were entered into a spreadsheet, and that spreadsheet was turned into an ArcGIS point shapefile for analysis. These data are available for professional archaeologists only. Please contact the investigator by E-mail if you would like a copy of these data.
DOI: 10.6073/pasta/20fa453aa3ea20ec706f4c16ba0af1cc
title: Chemical speciation of copper in a salt marsh estuary near Sapelo Island, Georgia

description: The concentrations of dissolved copper (Cud), copper-binding ligands, thiourea-type thiols and humic substances (HSCu) were measured in estuarine waters adjacent to Sapelo Island, Georgia, USA, on a monthly basis from April to December 2014. Here we present the seasonal cycle of copper speciation within the estuary and compare it to the development of an annually occurring bloom of ammonia oxidising archaea (AOA) Thaumarchaeota, which require copper for many enzymes. Two types of complexing ligands (L1 and L2) were found to dominate with mean complex stabilities (log K'CuL) of 14.5 and 12.8. Strong complexation resulted in lowering of the free cupric ion (Cu2+) concentration to femtomolar (fM) levels throughout the study and to sub-fM levels during the summer months. A Thaumarchaeota bloom during this period suggests that this organism manages to grow at very low Cu2+ concentrations. Correlation of the concentration of the L1 ligand class with a thiourea-type thiol and the L2 ligand class with HSCu provide convincing evidence for the identity of the ligands. Due to the stronger complex stability, 82 - 99 % of the copper was bound to L1. Thiourea-type thiols form strong Cu(I) species, suggesting that ~90% copper is present as Cu(I) in this region, upsetting the paradigm of its predominance as Cu(II). In view of the very low concentration of free copper (pCu &gt;15 at the onset and during the bloom) and a reputedly high requirement for copper, it is likely that the Thaumarchaeota are able to access the thiol-bound copper directly.
DOI: 10.6073/pasta/d4e6577aa7dfcc6f2f36781f162a4124
title: Archaeological shovel test data for Little Sapelo Island, Mary Hammock, Patterson Island, and Pumpkin Hammock; Spring 2007, Summer 2007 and 2008
DOI: 10.6073/pasta/d1022e89711fa90c1af75b27fe7a088f
title: Fall 2000 fungal monitoring -- marshgrass ergosterol content and ascospore release rates at 10 GCE sampling sites

description: Leaves of dominant marsh plants were collected from permanent plots in 10 GCE LTER sampling sites in order to assess the relative biomass and activity of fungal decomposers. The quantity of ergosterol, a specific fungal cell-membrane component, and the rate of ascomycete spore expulsion were measured in pooled lots of leaves from the dominant marsh vegetation at each site. Samples were collected from both creek bank and mid-marsh habitats. The dry weight and organic content of the plant material was also measured. This study is part of the GCE microbial decomposer monitoring program, and will be repeated annually to assess long-term patterns of fungal activity in relation to various environmental factors.
DOI: 10.6073/pasta/748e9b9de9efe1fb18929bfd6ed2d834
title: Fall 2001 fungal monitoring -- marshgrass ergosterol content and ascospore release rates at 10 GCE sampling sites

description: Leaves of dominant marsh plants were collected from permanent plots in 10 GCE LTER sampling sites in order to assess the relative biomass and activity of fungal decomposers. The quantity of ergosterol, a specific fungal cell-membrane component, and the rate of ascomycete spore expulsion were measured in pooled lots of leaves from the dominant marsh vegetation at each site. Samples were collected from both creek bank and mid-marsh habitats. The dry weight and organic content of the plant material was also measured. This study is part of the GCE microbial decomposer monitoring program, and will be repeated annually to assess long-term patterns of fungal activity in relation to various environmental factors.
DOI: 10.15468/dl.syw2vt
title: Occurrence Download

description: A dataset containing 3718 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hoplias malabaricus (Bloch, 1794)"
 ]
}

 The dataset includes 3718 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012352-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9tf8yz
title: Occurrence Download

description: A dataset containing 342 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.3.8_1",
 "Month is one of (January, February, March, April, May, October, November, December)",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Amsinckia Lehm.",
 "Year 1997-2024"
 ]
}

 The dataset includes 342 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012353-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13768608
title: A longitudinal single-cell atlas of anti-tumour necrosis factor treatment in inflammatory bowel disease

description: A longitudinal single-cell atlas of anti-tumour necrosis factor treatment in inflammatory bowel disease. Datasets including raw annotated anndata file used for downstream analysis, and in time, H&E slides, and any other data will be uploaded here. Please access interactive MDV browser here.
DOI: 10.5281/zenodo.13965420
title: A longitudinal single-cell atlas of anti-tumour necrosis factor treatment in inflammatory bowel disease

description: ****30 Oct: PLEASE DO NOT USE THE COMPARTMENT SPECIFIC OBJECTS CURRENTLY UPLOADED, AS THERE IS A DISCREPANCY IN THE OBS COLUMN - WE WILL BE UPLOADING A COMBINED AND SPLIT OBJECTS TODAY HAVING CORRECTED THIS ERROR****

 

A longitudinal single-cell atlas of anti-tumour necrosis factor treatment in inflammatory bowel disease. Anndata objects for analysis included in data release on 21 October 2024. GEO upload for bam files and CellRanger pipeline output is ongoing, and currently awaiting GEO (ID expected week of 21st October). Other data to be uploaded to Zenodo include H&E slides. Please access interactive MDV browser here.
DOI: 10.15468/dl.b8xa9a
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hyphessobrycon moniliger Moreira, Lima & Costa, 2002"
 ]
}

 The dataset includes 86 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012354-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gwaccs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "ScientificName" : [
 "is one of (Panthera leo, Ursus arctos, Canis lupus)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012355-241024112534372/datasets/export for details.
DOI: 10.5518/805
title: Dataset associated with "Isotropic liquid crystal elastomers as exceptional photoelastic strain sensors"

description: Isotropic elastomeric materials containing liquid crystalline mesogenic unit are shown to have exceptionally large photoelastic constants and compliances that outperform commercially available photoelastic sensor materials. This dataset contains the data from various forms of tensile mechanical testing performed on the new materials developed. In these tests, the strain-induced ordering of the mesogenic units was monitored using birefringence measurements, polarised Raman spectroscopy and the guest-host dye effect.
DOI: 10.15468/dl.4u4e7u
title: Occurrence Download

description: A dataset containing 246 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Geometry POLYGON((-230.02756 -0.02032,-230.62405 -2.06331,-228.0293 -2.4063,-226.62754 -0.4826,-227.98456 0.17354,-230.02756 -0.02032))",
 "Geometry POLYGON((-229.90826 0.08407,-230.69861 -2.19752,-227.2986 -2.48086,-226.22491 -0.07997,-229.90826 0.08407))"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 246 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012356-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4pbzf4
title: Occurrence Download

description: A dataset containing 187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hypostomus cochliodon Kner, 1854"
 ]
}

 The dataset includes 187 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012357-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fey9ze
title: Occurrence Download

description: A dataset containing 330 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hypostomus commersoni Valenciennes, 1836"
 ]
}

 The dataset includes 330 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012358-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xd8qm3
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "DatasetKey is Royal Botanic Gardens, Kew - Herbarium Specimens",
 "Geometry POLYGON((0.93571 52.51492,1.83726 52.51492,1.83726 53.03832,0.93571 53.03832,0.93571 52.51492))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012360-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yxu5hr
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Leporinus macrocephalus Garavello & Britski, 1988"
 ]
}

 The dataset includes 84 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012361-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.293h7s
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Leporinus tigrinus Borodin, 1929"
 ]
}

 The dataset includes 112 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012362-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27336105.v1
title: Guidelines to Assess Hedonic Aspects in Chatbots (GAHAC)

description: Guidelines to Assess Hedonic Aspects in Chatbots (GAHAC)
DOI: 10.15468/dl.8nx8ng
title: Occurrence Download

description: A dataset containing 7541353 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acipenser baerii Brandt, 1869, Acipenser ruthenus Linnaeus, 1758, Acipenser transmontanus Richardson, 1836, Carassius auratus (Linnaeus, 1758), Carassius carassius (Linnaeus, 1758), Coregonus lavaretus (Linnaeus, 1758), Ctenopharyngodon idella (Valenciennes, 1844), Cyprinus carpio Linnaeus, 1758, Esox lucius Linnaeus, 1758, Hypophthalmichthys molitrix (Valenciennes, 1844), Hypophthalmichthys nobilis (Richardson, 1845), Leuciscus idus (Linnaeus, 1758), Leuciscus leuciscus (Linnaeus, 1758), Micropterus salmoides (Lacepède, 1802), Oncorhynchus mykiss (Walbaum, 1792), Oreochromis mossambicus (Peters, 1852), Oreochromis niloticus (Linnaeus, 1758), Perca fluviatilis Linnaeus, 1758, Rutilus rutilus (Linnaeus, 1758), Salmo trutta Linnaeus, 1758, Salvelinus alpinus alpinus, Salvelinus fontinalis (Mitchill, 1814), Sander lucioperca (Linnaeus, 1758), Scardinius erythrophthalmus (Linnaeus, 1758), Silurus glanis Linnaeus, 1758, Thymallus thymallus (Linnaeus, 1758), Tinca tinca (Linnaeus, 1758), Acipenser gueldenstaedtii Brandt & Ratzeburg, 1833, Carassius gibelio (Bloch, 1782), Polyodon spathula (Walbaum, 1792))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7541353 records from 1695 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012343-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15708806
title: Nine annual time series of period indices for England and Wales dataset
DOI: 10.5281/zenodo.15708805
title: Nine annual time series of period indices for England and Wales dataset
DOI: 10.15468/dl.m7rcva
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula recens Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((18.2339 -32.5266,18.1411 -32.657,18.1007 -32.7021,18.0224 -32.6366,17.8923 -32.6419,17.754 -32.8255,17.7723 -32.9007,20.509 -32.9007,20.509 -28.5786,16.2782 -28.5786,16.4358 -28.7202,16.726 -29.1235,17.1957 -30.3752,17.6655 -31.1743,18.1322 -31.7679,18.2495 -32.2638,18.2339 -32.5266))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061194-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v52y9s
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula recens Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.6372 -28.0032,16.2782 -28.5786,20.509 -28.5786,20.509 -24.0715,15.4933 -24.0715,15.4945 -24.1257,16.0509 -25.6631,15.6372 -28.0032))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061195-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29207942
title: Finite-time scaling beyond the Kibble-Zurek prerequisite in Dirac systems

description: This file contains the source data for finite-time scaling in both the honeycomb Hubbard model and the honeycomb t-V model.
DOI: 10.6084/m9.figshare.29207942.v7
title: Finite-time scaling beyond the Kibble-Zurek prerequisite in Dirac systems

description: This file contains the source data for finite-time scaling in both the honeycomb Hubbard model and the honeycomb t-V model.
DOI: 10.6084/m9.figshare.29207942.v6
title: Finite-time scaling beyond the Kibble-Zurek prerequisite in Dirac systems

description: This file contains the source data for finite-time scaling in both the honeycomb Hubbard model and the honeycomb t-V model.
DOI: 10.15468/dl.9nc6y4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula recens Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.4784 -23.4046,15.4933 -24.0715,20.509 -24.0715,20.509 -24.0455,20.0952 -23.5072,19.9968 -23.017,19.7843 -22.5405,19.1988 -21.8785,18.5972 -21.5447,17.8859 -21.3993,17.1626 -21.4805,16.5332 -21.7596,16.1257 -22.0882,15.8234 -22.4662,15.606 -22.8993,15.4784 -23.4046))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061196-250525065834625/datasets/export for details.
DOI: 10.25451/flinders.29312828
title: Training and test sets

description: focus results (1): the dataset used to train and internally validate random forest model shown here- https://github.com/Laura-RC/forest_scripts/blob/main/random_forest_cleanest_version.ipynbnewsetfam: A second dataset unseen by the model for testing purposes
DOI: 10.25451/flinders.29312828.v1
title: Training and test sets

description: focus results (1): the dataset used to train and internally validate random forest model shown here- https://github.com/Laura-RC/forest_scripts/blob/main/random_forest_cleanest_version.ipynbnewsetfam: A second dataset unseen by the model for testing purposes
DOI: 10.25451/flinders.29312828.v2
title: Training and test sets

description: focus results (1): the dataset used to train and internally validate random forest model shown here- https://github.com/Laura-RC/forest_scripts/blob/main/random_forest_cleanest_version.ipynbnewsetfam: A second dataset unseen by the model for testing purposes
DOI: 10.15468/dl.j7zvz5
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula recens Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -28.5786,20.509 -28.5786,20.509 -32.9007,25.5395 -32.9007,25.5395 -28.5786))"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061197-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.