cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.kd51c5b88
title: Considering inner and outer bark as distinctive tissues helps to disentangle the effects of bark traits on decomposition

description: Revealing the ecological consequences of bark multifunctionality and its
 underlying traits has become a relatively new but essential focus in plant
 ecology. Although the enormous differences between the most crucial bark
 layers, i.e., inner and outer bark, in structure and functions have been
 widely recognized, the overall bark has been regarded as a homogenous
 tissue in most bark-related studies. This has led to poor knowledge on the
 functional independence, specialized contributions and possible linkages
 of inner and outer bark traits across tree species when further evaluating
 the crucial ecosystem functions that bark provides, especially in driving
 variation in bark decomposition. To fill this research gap, we used a
 “common garden experiment” on deadwood of six gymnosperms in a temperate
 forest in the Netherlands over four years of decomposition. We evaluated
 the differences and associations between inner and outer bark in initial
 functional traits, decomposition rates and afterlife effects of traits in
 driving in-situ bark decomposition across tree species at the earlier
 decomposition stage. We report four main findings: 1) inner and outer bark
 traits varied significantly and were not coordinated across tree species;
 2) correspondingly, the decomposition of inner and outer bark were
 asynchronous and not coordinated across species and inner bark generally
 decomposed faster than outer bark; 3) the strong predictive traits driving
 bark decomposability were bark layer-specific, with several inner bark
 traits controlling inner bark decomposition rates but outer bark
 decomposability being poorly predicted by outer bark traits; 4) besides
 being controlled by inner bark traits, inner bark decomposition was also
 indirectly regulated by several functional traits and the
 structure-related trait spectrum of outer bark. Synthesis. This is the
 first study that has linked functional traits, decomposability and
 afterlife effects of inner and outer bark within the bark quantitatively.
 We highlight the significance of separating functional traits and
 ecological consequences of inner and outer bark in research in bark
 ecology and deadwood dynamics, rather than erroneously considering bark as
 a homogeneous tissue. Such research will help to better evaluate the
 function-oriented contribution of bark to the turnover of forest carbon
 and biogeochemical cycles from local to global scale.
DOI: 10.5285/e8cff3f4-60e5-46cf-a4d0-0f7ecf222ae4
title: Functional traits of savanna trees, shrubs, grasses and herbaceous species in Cerrado, Brazil, 2021

description: This data comprises key hydraulic and photosynthetic traits, nutrient concentration and plant structure for savanna species (trees, shrubs, grasses and herbaceous) of the Cerrado, collected in the Chapada dos Veadeiros National Park (PNCV; 14°05' S, 47°40' W), located in the central plateau region of Brazil in 2021. These data were collected throughout May-September 2021 on 19 woody species across 11 botanical families, and for 20 monocot species across 6 botanical families, including grasses, herbs and Velloziaceae.  32 plant functional traits were measured on the 19 woody species, and 17 plant functional traits were measured on the 20 monocot species. Trait collections followed standardised published methodologies. The aim of this data was to assess the functional trait space occupied by Cerrado species and whether they differed according to vegetation type, and whether certain species or plants from certain environments were more or less resistant to drought stress. 
This research was supported by Natural Environment Research Council (Grant: NE/S000011/1).
description: To measure photosynthetic trait values and leaf water potential values on woody species, 1-2m length branches were extracted from the top of each tree crown and leaves from these branches were measured in-situ in the field.  For monocots, photosynthetic traits were measured directly on the plant in-situ, and for leaf water potential, 2-3 leaves were extracted and measured in-situ. For all other traits, either leaves (monocots) or branches (woody species) were extracted from the plant. Immediately after sampling material, it was sealed in moist bags and transported to Alto Paraíso de Goiás (10-30 minutes' drive), where all other functional traits were measured. The traits measured included structural, hydraulic, and nutritional characteristics of leaves and wood. A complete list of the traits measured, along with the procedures used for these measurements, is provided in the supporting information. All data were entered into an Excel spreadsheet and saved as a .csv file.
DOI: 10.22008/promice/data/ice_discharge/d/v02/6sjxle
title: GIS.nc

description: Greenland discharge, coverage, and error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/8g4h2t
title: GIS_err.csv

description: Greenland error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/kffsrx
title: region_coverage.csv

description: Regional coverage. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/stfojl
title: region_err.csv

description: Regional error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/y5leao
title: region_D.csv

description: Regional discharge. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/smk98u
title: region.nc

description: Regional discharge, coverage, and error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/ecwnlb
title: sector_D.csv

description: Sector discharge. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/q3cot3
title: sector_coverage.csv

description: Sector coverage. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/33ixeb
title: sector_err.csv

description: Sector error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/alowua
title: sector.nc

description: Sector discharge, coverage, and error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/mdzcix
title: gate_coverage.csv

description: Gate coverage. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/8f2uaw
title: gate_D.csv

description: Gate discharge. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/rk4zjo
title: gate_err.csv

description: Gate errors. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/htqeb8
title: gate.nc

description: Gate discharge, coverage, error, and metadata. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/lxaelo
title: GIS_D.csv

description: Greenland discharge. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/njxmxl
title: GIS_coverage.csv

description: Greenland coverage. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/57ltpg
title: GIS_err.csv

description: Greenland error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/cjwban
title: GIS.nc

description: Greenland discharge, coverage, and error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/eodkes
title: region_coverage.csv

description: Regional coverage. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/iusx2v
title: region_D.csv

description: Regional discharge. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/uatr4g
title: region_err.csv

description: Regional error. Git hash: 9f49d54
DOI: 10.5061/dryad.34tmpg4nr
title: Cognitive experience alters cortical involvement in goal-directed navigation

description: Neural activity in the mammalian cortex has been studied extensively
 during decision tasks, and recent work aims to identify under what
 conditions cortex is actually necessary for these tasks. We studied
 whether cognitive experience, beyond sensory or motor learning, affects
 cortical involvement in goal-directed navigation. To this aim, we first
 trained different cohorts of mice on either a simple goal-directed
 navigation task (“simple task”), or one of two complex tasks involving
 delay periods (“delay task”) or rule reversals (“switching task”) in
 virtual reality. After task learning, we optogenetically inhibited various
 cortical areas on a subset of trials while mice performed a given task to
 assess the necessity of each area for task performance. We found overall
 minor cortical necessity for the simple task, but large necessity of
 cortical association areas (specifically of posterior parietal cortex and
 retrosplenial cortex) for each complex task. We then permanently
 transitioned mice with complex task experience to the simple task, again
 inhibiting cortical areas on a subset of trials. Crucially, we found that
 these mice heavily relied on cortical association areas for simple task
 performance, unlike mice without prior complex task experience. Therefore,
 past experience is a key factor in determining whether cortical areas have
 a causal role in goal-directed navigation. In this dataset, we include
 both behavioral data for the initial task training period, as well as
 behavioral data for all subsequent optogenetic inhibition experiments.
 Details about the data structure are available in the accompanying
 Readme.txt files.
description: Transgenic mice expressing Channelrhodopsin in GABAergic cortical
 interneurons were trained in a goal-directed virtual visual navigation
 task (simple task, delay task, or switching task), and optogenetic
 inhibition was performed on a subset of behavioral trials, with each trial
 containing one of the following inhibition targets: posterior parietal
 cortex, retrosplenial cortex, somatosensory cortex, anterior cingulate
 cortex / secondary motor cortex, or a control spot. Virtual reality
 environments were operated and behavioral data were acquired in ViRMEn
 (Virtual Reality Mouse Engine, Aronov and Tank, 2014). Photoinhibition was
 controlled and inhibition parameters were saved by a separate computer
 using MATLAB.
description: MATLAB
DOI: 10.22008/promice/data/ice_discharge/d/v02/wihdym
title: region.nc

description: Regional discharge, coverage, and error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/kzyjzt
title: sector_D.csv

description: Sector discharge. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/wcwba4
title: sector_coverage.csv

description: Sector coverage. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/oxxwtv
title: sector_err.csv

description: Sector error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/yvc039
title: sector.nc

description: Sector discharge, coverage, and error. Git hash: 9f49d54
DOI: 10.7291/d1zx0m
title: Frankenia salina and Jaumea carnosa performance in a restored salt marsh

description: The Stress Gradient Hypothesis (SGH) predicts facilitation will become
 more important than competition where abiotic stress is high, and the
 framework successfully predicts positive interactions between species in
 many systems. Fewer studies have focused on intraspecific facilitation,
 and to our knowledge none examine intraspecific interactions in Pacific
 Coast salt marshes of North America. We used two species that tend to
 occur in large, monospecific patches to test for intraspecific
 facilitation in a restored California marsh, where tides and evaporation
 during summer create moisture and salinity gradients across elevation. We
 tested performance of Frankenia salina or Jaumea carnosa in restoration
 plots using two treatments: clustered plantings to promote facilitation,
 and widely spaced plantings to limit interaction between individuals. We
 characterized the soil water potential gradient and measured plant
 survival, cover, physiology, and susceptibility to herbivory across
 elevation and planting treatments. Soil water potential declined sharply
 with elevation, suggesting plant stress should be higher upslope. However,
 tissue water potential was unaffected by elevation, and survival was high
 – suggesting growing conditions remained benign. A seawater addition
 treatment did not alter the response of plants or plant interactions to
 the abiotic gradient. At nineteen months, intraspecific competition
 prevailed across the entire elevation gradient for both species, with less
 transplant cover in clustered plantings. However, clustered Frankenia
 fared better during a transient period of heavy rabbit herbivory. Aside
 from this temporary benefit, clustering did not reduce stress and strongly
 suppressed growth – suggesting that restoration designs for the high marsh
 should minimize competition.
description: See Methods and Supporting Information S2 for details on data
 collection methods; and Supporting Information S3 for details on
 statistical analyses. The attached archive includes a
 read-me file that details the content of each .csv in the data
 set.
description: The files in the attached archive are either .rtf or .csv.
DOI: 10.22008/promice/data/ice_discharge/d/v02/ib8h1g
title: gate_coverage.csv

description: Gate coverage. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/l7q2ro
title: gate_err.csv

description: Gate errors. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/m8zeas
title: gate_D.csv

description: Gate discharge. Git hash: 9f49d54
DOI: 10.5061/dryad.2547d7wt0
title: Shifts in dominance and complementarity between sessile oak and beech along ecological gradients

description: Whether tree species benefit from growing in a mixed forest depends on the
 relative importance of positive versus negative interactions, which varies
 according to abiotic conditions. In mixture with sessile oak (Quercus
 petraea (Matt.) Liebl.), European beech (Fagus sylvatica L.) is often
 competitively dominant. Sessile oak, however, is more resistant to water
 deficit stress. Under water-limiting conditions, facilitation or even
 competition exerted by oak may gain in importance. We investigated the
 relative importance of dominance and complementarity in 7 triplets of pure
 and mixed forests in Belgium’s temperate oceanic climate. We analysed ring
 width data of 145 oaks and 138 beech trees along three distinct gradients:
 a spatial (i) and a temporal (ii) water availability gradient and a
 temporal gradient in growing conditions (iii). Gradient (ii) was
 represented by a precipitation variable, obtained by defining a large set
 of candidate climate variables over variable time frames, narrowed down
 using a species and site-specific lasso model. Growing conditions on a
 temporal gradient (iii) were represented by standardized tree growth. Two
 sets of linear mixed-effects models were used. Growth models assess mixing
 effects on ring width along gradients (i) and (ii). Mixing index models
 test for all three gradients how they affect the relative difference in
 average ring width of trees in mixed and pure stands. Beech trees grew
 faster than oak trees, and mixing further increased beech growth while
 decreasing oak growth, except on drier sites where the negative effect on
 oak growth disappeared. Low precipitation years, in contrast, reduced the
 beneficial effect of mixing on beech. In years of low growth, the positive
 mixing effect on beech growth was reinforced, and the negative mixing
 effect on oak growth decreased. Synthesis. Mixing buffered against growth
 limitations in general, though this depends on the nature of the
 limitation and the gradient over which it is measured. On dry sites,
 competitive dominance of beech was replaced by higher complementarity
 between species. During dry years, however, oak did not profit from a
 decreased mixing benefit of beech.
description: This dataset contains tree ring widths from 145 sessile oak trees
 (Quercus petraea (Matt.) Liebl.) and 138 beech trees (Fagus sylvatica L.),
 collected on 7 study sites in Belgium. We  sampled on each site about 10
 dominant trees of each species in a pure, and 10 in a mixed (oak-beech)
 stand. The dataset also contains a selection of site-specific climate
 variables relevant to tree growth.
description: The data files are created using R as comma separated values
 (csv) and can be read by a large range of statistical software, text
 editors, and spreadsheet software.
DOI: 10.22008/promice/data/ice_discharge/d/v02/7d7ult
title: gate.nc

description: Gate discharge, coverage, error, and metadata. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/er1m0q
title: GIS_coverage.csv

description: Greenland coverage. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/dnsrld
title: GIS_err.csv

description: Greenland error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/h3gbmu
title: GIS_D.csv

description: Greenland discharge. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/r7bo6v
title: GIS.nc

description: Greenland discharge, coverage, and error. Git hash: 9f49d54
DOI: 10.5061/dryad.931zcrjns
title: Marine biodiversity patterns in coastal Australian waters revealed by a three-year environmental DNA survey

description: Aim To test the capacity of eDNA to characterise the spatial and seasonal
 patterns found within a range of zooplankton communities, and investigate
 links with concurrent abiotic data collected as part of Australia’s
 Integrated Marine Observing System (IMOS) programme. Location Samples were
 sourced seasonally for three years from nine Pan-Australian marine sites
 (n=90). Methods Here we apply a multi-assay metabarcoding approach to
 environmental DNA extracted from a rare long-term collection of bulk
 plankton samples. Six assays (targeting both the 16SrRNA and COI genes)
 were used to amplify and sequence the zooplankton diversity found within
 each sample. The data generated from each assay was filtered and clustered
 into OTUs prior to analysis. Abiotic IMOS data collected alongside the
 plankton collection enabled us to explore the physical and chemical
 drivers of community composition. Results The eDNA metabarcoding generated
 over 25 million sequences, identified in excess of 500 distinct taxa and
 detected clear spatial differences in marine metazoan communities. We
 found that site and sea surface temperature are the most consistent
 predictors of differences between zooplankton communities. We detected
 endangered and invasive species such as the
 bryozoan Membranipora membranace and the
 mollusc Maoricolpus roseus, and seasonal occurrences of species
 such as humpback whales (Megaptera novaeangliae). We also estimated the
 number of samples required to ensure robust marine eDNA metabarcoding
 biomonitoring programs into the future. Main Conclusion Our results
 demonstrate the ability of eDNA to capture and map zooplankton community
 changes in response to seasonal and spatial stressors and provide vital
 evidence to environmental stakeholders. We confirm that eDNA offers a
 practical opportunity for an ecosystem-wide approach to the long-term
 biomonitoring and understanding marine biomes where a morphological
 approach is not feasible.
description: DNA was extracted from zooplankton samples and sequenced using
 six different barcoding assays. The sequences from each
 assay were sorted into samples, labelled for identification, filtered for
 quality and uploaded as raw fasta files. A sample key for the sample code
 used has also been uploaded along with the abiotic data used in this
 study.
DOI: 10.22008/promice/data/ice_discharge/d/v02/rtqt3x
title: region_D.csv

description: Regional discharge. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/ufbjbm
title: region_coverage.csv

description: Regional coverage. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/5wgp6w
title: region.nc

description: Regional discharge, coverage, and error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/s9hhef
title: region_err.csv

description: Regional error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/ok4dme
title: sector_coverage.csv

description: Sector coverage. Git hash: 9f49d54
DOI: 10.5061/dryad.ffbg79cxp
title: Data for: Chronic corticosterone deteriorates latrine and nesting behaviours in mice

description: Self-care behaviours are actions that help maintain good health and
 surroundings. For example, appropriate toileting, sleeping in the bed, and
 bathing and washing are among self-care behaviours in humans. Animals also
 perform similar self-care behaviours such as latrine, nesting, and
 self-grooming. Studies have shown that chronic stress disrupts nesting and
 self-grooming behaviours. However, the effect of chronic stress on latrine
 behaviour, preferential, repeated defecation at specific locations, has
 not yet been clarified. This study aimed to investigate the influence of
 chronic corticosterone administration on latrine and nesting behaviours in
 mice. The variation in defecation location was quantified as the degree of
 the latrine behaviour by using Shannon entropy. The nest quality was
 scored based on shape. The study showed that mice exposed to chronic
 corticosterone had scattered defecation sites and lower nest quality
 compared to the control group. Furthermore, results showed that more
 scattered defecation behaviour was associated with lower nest quality at
 an individual level. Additionally, the deterioration of these self-care
 behaviours was associated with depression-like behaviours such as less
 open field activity and increased immobility time during the tail
 suspension test. These results suggest that chronic corticosterone
 deteriorates self-care behaviours such as latrine and nesting in mice.
 This dataset includes physiological and behavioural data of mice used in
 the present study.
DOI: 10.22008/promice/data/ice_discharge/d/v02/bnri5d
title: sector_err.csv

description: Sector error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/eybz95
title: sector_D.csv

description: Sector discharge. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/dhuxnk
title: sector.nc

description: Sector discharge, coverage, and error. Git hash: 9f49d54
DOI: 10.22008/promice/data/ice_discharge/d/v02/iiyjpd
title: gate_coverage.csv

description: Gate coverage. Git hash: 9af6221
DOI: 10.22008/promice/data/ice_discharge/d/v02/mjgje5
title: gate_D.csv

description: Gate discharge. Git hash: 9af6221
DOI: 10.5061/dryad.q2bvq83nh
title: Quantifying the water contribution of subtropical mode water and related isopycnal/diapycnal water mixing in the western Pacific boundary current area using radiocesium: a significant nutrient contribution from subtropical Pacific gyre to the marginal region

description: This is the dataset for "Quantifying the Water Contribution of
 Subtropical Mode Water and Related Isopycnal/Diapycnal Water Mixing in the
 Western Pacific Boundary Current Area using Radiocesium: A Significant
 Nutrient Contribution from Subtropical Pacific Gyre to the Marginal
 Region".
DOI: 10.22008/promice/data/ice_discharge/d/v02/moqdzp
title: gate_err.csv

description: Gate errors. Git hash: 9af6221
DOI: 10.22008/promice/data/ice_discharge/d/v02/rwfhha
title: gate_meta.csv

description: Gate metadata. Git hash: 9af6221
DOI: 10.22008/promice/data/ice_discharge/d/v02/jwtu8f
title: GIS_coverage.csv

description: Greenland coverage. Git hash: 9af6221
DOI: 10.22008/promice/data/ice_discharge/d/v02/xrqggd
title: gate.nc

description: Gate discharge, coverage, error, and metadata. Git hash: 9af6221
DOI: 10.22008/promice/data/ice_discharge/d/v02/jvix8v
title: GIS_D.csv

description: Greenland discharge. Git hash: 9af6221