cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17863/cam.95037
title: Research data supporting Giesche et al., 2019 “Indian winter and summer monsoon strength over the 4.2 ka BP event in foraminifer isotope records from the Indus River delta in the Arabian Sea”

description: The oxygen and carbon isotope record of the planktonic foraminifera in marine core 63KA in the northeast Arabian Sea provides evidence for an abrupt decrease in rainfall and reduction in Indus River discharge at 4.2 ka. We measure the oxygen and carbon isotope profiles of two thermocline-dwelling foraminifer species at decadal resolution over the interval from 5.4 to 3.0 ka. By selecting both thermocline-dwelling (Neogloboquadrina dutertrei) and shallow-dwelling (Globigerinoides sacculifer) species, we provide enhanced detail of the climatic changes that occurred over this crucial time interval. We also replicate a larger size fraction of G. ruber than measured previously by Staubwasser et al., 2003 (https://doi.org/10.1029/2002GL016822). $$ \ $$ The .xlsx file contains two sheets relating to measurements made from the 63KA marine core. $$ \ $$ The first sheet features oxygen stable isotope data from G. ruber 400-500um, G. sacculifer 315-400um, and N. dutertrei 315-400um. It also includes G. ruber 315-400um (Staubwasser et al., 2003). An age model was generated using radiocarbon dates from Staubwasser et al., 2003, and the BACON Bayesian age modelling software (Blaauw and Christen, 2011, https://doi.org/10.1214/11-BA618). $$ \ $$ The second sheet features carbon stable isotope data for the same species and size ranges of foraminifera as listed for the oxygen data on the first sheet. $$ \ $$ The data is additionally available at http://eprints.esc.cam.ac.uk/4371/.
DOI: 10.6084/m9.figshare.c.3627779_d4.v1
title: Additional file 1: of Bacterial small RNAs in the Genus Rickettsia

description: List of predicted sRNAs via rickettsial species. (XLSX 595 kb)
DOI: 10.6084/m9.figshare.c.3627803_d1.v1
title: MOESM2 of PCSK5 mutation in a patient with the VACTERL association

description: Additional file 2: Table S2. Summary of the mutations identified in the subjects and database.
DOI: 10.6084/m9.figshare.c.3627779_d5.v1
title: Additional file 2: of Bacterial small RNAs in the Genus Rickettsia

description: List of target genes predicted to interact with R. prowazekii strain Brienl sRNAs. (XLSX 86 kb)
DOI: 10.6084/m9.figshare.c.3627770_d12.v1
title: Additional file 9: Table S8. of Genome-wide transcription start site profiling in biofilm-grown Burkholderia cenocepacia J2315

description: Amino acid sequences associated with orphan TSS or internal antisense TSS and with homologues in the non-redundant protein sequence database. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3627827_d6.v1
title: MOESM11 of Maintenance-energy requirements and robustness of Saccharomyces cerevisiae at aerobic near-zero specific growth rates

description: Additional file 11. See Additional file 8 caption.
DOI: 10.6084/m9.figshare.c.3627827_d7.v1
title: MOESM9 of Maintenance-energy requirements and robustness of Saccharomyces cerevisiae at aerobic near-zero specific growth rates

description: Additional file 9. See Additional file 8 caption.
DOI: 10.6084/m9.figshare.c.3627827_d8.v1
title: MOESM14 of Maintenance-energy requirements and robustness of Saccharomyces cerevisiae at aerobic near-zero specific growth rates

description: Additional file 14. List of gene-groups described in literature that were mined for enrichment among differentially expressed genes identified in clusters 1 and 2 in Fig.Â 6.
DOI: 10.6084/m9.figshare.c.3627827_d9.v1
title: MOESM12 of Maintenance-energy requirements and robustness of Saccharomyces cerevisiae at aerobic near-zero specific growth rates

description: Additional file 12. See Additional file 8 caption.
DOI: 10.17863/cam.43445
title: Data supporting "Fine structure and spin dynamics of linearly polarized indirect excitons in two-dimensional CdSe/CdTe colloidal heterostructures"

description: Raw data underlying all figures of the manuscript are in origin worksheet files. Data consists of magneto-optical measurements on colloidal nanoplatelets. Figure 1 is a cartoon and hence not data. Figure 2 is magneto-PL measurements and spectra. Figure 3 is DLP (linear polarisation) measurements. Figure 4 is time resolved PL at high magnetic fields. Figures 5 and 6 are spin beating and time resolved PL data.
DOI: 10.6084/m9.figshare.c.3627827_d10.v1
title: MOESM3 of Maintenance-energy requirements and robustness of Saccharomyces cerevisiae at aerobic near-zero specific growth rates

description: Additional file 3. Genes with significant growth-rate dependent gene expression in aerobic and anaerobic cultures between specific growth rates of 0.1 h-1 and below 0.001 h-1 (see Fig.Â 6).
DOI: 10.17863/cam.60437
title: Research data supporting "Corrigendum: A new benchmark problem for electromagnetic modelling of superconductors: the high-Tc superconducting dynamo"

description: Research data supporting [Corrigendum: A new benchmark problem for electromagnetic modelling of superconductors: the high-Tc superconducting dynamo]. Corrigendum_MEMEP_Results_25-11-20.xlsx: This Excel file contains all of the raw data used to create Figures 1 and 2 in the Corrigendum. This includes both the new data for the MEMEP method and the original data from Ainslie MD et al 2020 Supercond. Sci. Technol. 33 105009 (see https://doi.org/10.17863/CAM.54005).
DOI: 10.6084/m9.figshare.c.3627827_d12.v1
title: MOESM6 of Maintenance-energy requirements and robustness of Saccharomyces cerevisiae at aerobic near-zero specific growth rates

description: Additional file 6. See Additional file 5 caption.
DOI: 10.17863/cam.101687
title: Research data supporting "An Experimental Investigation into the Dimensional Quality of the Material Extrusion Additive Manufacturing Process" (B.2)

description: Zip folder containing high speed camera frames (.mp4 files) showing deposition of single strands at various printing parameters. Each video was filmed with a Chronos 1.4 high-speed camera from Kron Technologies which was positioned at 30 mm focal distance from the subject. The optical axis was carefully positioned parallel with the printing direction. An aspect ratio of 1280 x 1024, frame rate of 1069 FPS, with an exposure time of 545 μs was used. The videos show displacements between material extrusion additive manufacturing machine's nozzle orifice centre and the deposited strand centre using the ABS material and at different extruder temperatures. The printing parameter combinations used are shown below. a) ABS material, nozzle gap height 0.2 mm, print head velocity 10 mm/s, and extruder temperature 200 deg. b) ABS material, nozzle gap height 0.2 mm, print head velocity 10 mm/s, and extruder temperature 240 deg. c) ABS material, nozzle gap height 0.5 mm, print head velocity 10 mm/s, and extruder temperature 260 deg.
DOI: 10.6084/m9.figshare.c.3627923_d1.v1
title: Additional file 1: of A hierarchical method to automatically encode Chinese diagnoses through semantic similarity estimation

description: Coding performance under all settings. The detailed precision, recall, and F-score of the proposed algorithm under two encoding methods, three semantic similarity measures, and various word similarity thresholds. (XLSX 53 kb)
DOI: 10.17863/cam.8457
title: Research data supporting "Structural insights into the EthR-DNA interaction using native mass spectrometry"

description: Raw data of native mass spectra and ITC.
DOI: 10.6084/m9.figshare.c.3627929_d1.v1
title: Additional file 1: Table S1. of Central obesity associates with renal hyperfiltration in the non-diabetic general population: a cross-sectional study

description: Regression models for the alternative renal hyperfiltration definitions. Table S2. mGFR cut-off points for renal hyperfiltration in male and female subjects from the study cohort with average height, weight and age. Table S3. Odds ratio for RHFheight, with body weight added as an independent variable. Table S4. Multiple linear regression with measured GFR and continuous obesity variables. (XLSX 22Â kb)
DOI: 10.6084/m9.figshare.c.3627926_d3.v1
title: Additional file 1: of The native microbiome of the nematode Caenorhabditis elegans: gateway to a new host-microbiome model

description: Data and results from statistical analysis of the native and experimental microbiome of C. elegans. This document contains a total of 23 tables as sheets of an Excel file, which summarize the material used and the results of the statistical analyses. Table S1-1. List of samples used for analysis of the Caenorhabditis native microbiome. Table S1-2. Summary of sample numbers used for analysis of the Caenorhabditis native microbiome. Table S1-3. Top 100 operational taxonomic units (OTUs) of the native microbiome of Caenorhabditis elegans. Table S1-4. Top 100 OTUs of the native microbiome of Caenorhabditis remanei. Table S1-5. Top 100 OTUs of the native microbiome of Caenorhabditis briggsae. Table S1-6. Statistical comparison of bacterial taxa abundances among sample types for the native Caenorhabditis microbiome. Table S1-7. Statistical evaluation of the factors for the canonical correspondence analysis of the native Caenorhabditis microbiome. Table S1-8. Statistical evaluation of the factors for the multivariate analysis of variance of the native Caenorhabditis microbiome. Table S1-9. List of bacterial and fungal isolates from natural C. elegans samples or corresponding substrates. Table S1-10. Overview of sample sizes for analysis of the experimental microbiome. Table S1-11. Overview of included and excluded samples in the analysis of the experimental microbiome. Table S1-12. Statistical comparison of bacterial taxa abundances among sample types for the experimental C. elegans microbiome. Table S1-13. Statistical evaluation of the factors for the canonical correspondence analysis of the experimental C. elegans microbiome. Table S1-14. Statistical evaluation of the factors for the multivariate analysis of variance of the experimental C. elegans microbiome. Table S1-15. Statistical comparison of bacterial taxa abundances among sample types for the second experiment with the experimental C. elegans microbiome. Table S1-16. Statistical evaluation of the factors for the canonical correspondence analysis of the second experiment with the experimental C. elegans microbiome. Table S1-17. Raw data for the bacterial colonization experiment. Table S1-18. Raw data for the population growth experiment with the experimental microbiome under different conditions. Table S1-19. Statistical analysis of C. elegans population growth on the experimental microbiome under different conditions. Table S1-20. Raw data for the population growth experiment with individual bacterial isolates. Table S1-21. Statistical analysis of C. elegans population growth on individual bacterial isolates. Table S1-22. Raw data for the analysis of bacterial effects on fungal growth. Table S1-23. General linear model analysis of antifungal effects of three Pseudomonas isolates. Table S1-24. Raw data for the bacterial effect on Drechmeria-induced worm killing. Table S1-25. Statistical analysis of an in vivo antifungal effect of Pseudomonas MYb11. (XLSX 116 kb)
DOI: 10.6084/m9.figshare.c.3627914_d6.v1
title: Additional file 1: Table S1. of Loss of maternal ANNEXIN A10 via a 34-kb deleted-type copy number variation is associated with embryonic mortality in Japanese Black cattle

description: Detailed features of deleted-type CNVRs on autosomes in this study. Positions are based on the UMD3.1 assembly of the bovine genome. 1 Multiple: CNVR contained more than one CNV in the same animal. Table S2. CNVR_322 with genome-wide associations with embryonic mortality. Embryonic mortality was defined by cows that received a second round of AI at 18–29 days (D), 30–60 D, 61–90 D, 91–140 D, and 141 D–parturition after the 1st AI. Table S3. Detailed features of CNVR_322 and the surrounding SNPs. Positions are based on the UMD3.1 assembly of the bovine genome. Table S4. Primer information for identification of CNVR_322 breakpoint. Positions are based on the UMD3.1 assembly of the bovine genome. Table S5. Genotype frequencies of CNVR_322 in 6364 cows and 2391 steers. Table S6. P-value of association between CNVR_322 and meat traits in 1156 Japanese Black cattle. 1 YE (%) = 69.419 + 0.13REA + 0.667RT - 0.025CW - 0.896SFT. Table S7. Number of corpora lutea and implantation sites in Anxa10 -/- and Anxa10 +/+ female mice. Table S8. Primers and probes for CNVR_322. Positions are based on the UMD3.1 assembly of the bovine genome. Table S9. Primers and probes for basic transcriptional factor 3. Positions are based on the UMD3.1 assembly of the bovine genome. Table S10. Information for multiplex PCR primers for CNVR_322. Positions are based on the UMD3.1 assembly of the bovine genome. Table S11. Primer and probe for bovine ANXA10 and mouse Anxa10 expression. Table S12. Primer information for exons 1 to 2 and exons 1 to 7 of ANXA10. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.c.3627935_d2.v1
title: Additional file 6: Table S2. of Ancient pathogen-driven adaptation triggers increased susceptibility to non-celiac wheat sensitivity in present-day European populations

description: SNPs showing exceptionally high differentiation at the genomic level. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3627935_d3.v1
title: Additional file 7: Table S3. of Ancient pathogen-driven adaptation triggers increased susceptibility to non-celiac wheat sensitivity in present-day European populations

description: Haplogroup frequencies in the NCWS and reference samples. (XLSX 10Â kb)
DOI: 10.7266/0a2bwfdp
title: Water quality data collected from Wolf River and Jourdan River, 2021-02-22 to 2021-12-22
DOI: 10.6084/m9.figshare.c.3627935_d4.v1
title: Additional file 2: Table S1. of Ancient pathogen-driven adaptation triggers increased susceptibility to non-celiac wheat sensitivity in present-day European populations

description: Details of sequence profiles for each NCWS subject. (XLSX 47Â kb)
DOI: 10.17863/cam.30984
title: Dataset for "Photocatalytic N‑Methylation of Amines over Pd/TiO2 for the Functionalization of Heterocycles and Pharmaceutical Intermediates"

description: Transmission electron microscopy images and NMR spcectroscopic data for the publication.
DOI: 10.17863/cam.35725
title: Research data supporting "Establishing, developing, and sustaining a community of Data Champions"

description: This dataset contains two sets of information: 1) The Schools and job roles of the 46 active Data Champions enrolled in the Programme in January 2018. The job category 'data professional' covers those who deal with research data directly in their day-to-day work. 'Other' includes roles such as administrators. 2) Anonymised results from a survey of active Data Champions carried out in September 2018. Data Champions were asked to give information on the activities they had carried out within the scope of the Programme in the previous 12 months.
DOI: 10.17863/cam.26355
title: Raw Data suporting article: Plastic waste as a feedstock for solar-driven H2 generation

description: This is the raw data for the publication "Plastic waste as a feedstock for solar-driven H2 generation." It includes an excel document that details how hydrogen quantities were calculated for all experiments (from gas chromatography measurements), NMR spectra, microscopy images (from transmission electron microscopy and scanning electron microscopy), and Origin files of UV-Vis spectra, mass spectrometry spectra, and additional photocatalytic experiment results.
DOI: 10.6084/m9.figshare.c.3627989_d6.v1
title: Additional file 6: of Prognostic impact of circulating tumor cell apoptosis and clusters in serial blood samples from patients with metastatic breast cancer in a prospective observational cohort

description: Supporting data. (XLS 73 kb)
DOI: 10.6084/m9.figshare.c.3628016_d2.v1
title: Additional file 2 of Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool

description: Cumulative length and number of single molecule maps per BNX file for T. castaneum data generated over time. Detailed metrics for molecule maps per BNX file (cumulative length and number of maps). Columns include cumulative length of molecule maps &gt; 150 kb, number of molecule maps &gt; 150 kb and date that BNX file was generated. (CSV 4.11 kb)
DOI: 10.6084/m9.figshare.c.3628016_d3.v1
title: Additional file 1 of Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool

description: Single molecule map stretch per scan in recent flowcells. Bases per pixel (bpp) is plotted for scans 1..n for each flowcell of mouse lemur molecules (purple). The first scan of each flowcell is indicated with a grey dashed line. The pre-adjusted molecule map stretch was determined by aligning molecule maps to the in silico maps. Data made available by P.A. Larsen, J. Rogers, A.D. Yoder and the Duke Lemur Center. (ZIP 55 kb)
DOI: 10.6084/m9.figshare.c.3628016_d4.v1
title: Additional file 3 of Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool

description: Single molecule map metrics and histograms from T. castaneum DNA. Detailed metrics for molecule maps including map N50, cumulative length and number of maps. Figures show histograms of per molecule map quality metrics including length, molecule map SNR and intensity, label count, label SNR and label intensity. Molecule maps are filter for minimum molecule lengths of 100, 150 or 180 kb. (ZIP 39.8 kb)
DOI: 10.17863/cam.106565
title: Research Data supporting "Resetting the drift of Oxygen Vacancies in Ultra-Thin HZO Ferroelectric Memories by Electrical Pulse Engineering"

description: The dataset contains the original data files in txt files. The data contains files to re-generate figures related to: 1. Electrical methods 2. Impedance methods 3. Optical methods The dataset also contains a readme file to understand the data files and method used to plot the data in publication
DOI: 10.6084/m9.figshare.c.3628025_d2.v1
title: Additional file 4 of Interactive knowledge discovery and data mining on genomic expression data with numeric formal concept analysis

description: CSV file of GO terms’ information for gene enrichment from WebGeneKFCA. A sample print-out from WebGeneKFCA with the information about the GO terms and their p-values computed as described in http://www.biomedcentral.com/content/supplementary/10.1186/s12859-016-1234-z-S2.pdfAdditional file 2 for the bicluster with intent MalePS, Parental NoDox, Clone 1 NoDox and Clone 3 NoDox from Fig. 4. It can also be obtained on-line at https://webgenekfca.com/webgenekfca/kfcaresultses/9 . (CSV 24 kb)
DOI: 10.6084/m9.figshare.c.3628016_d5.v1
title: Additional file 4 of Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool

description: Assembly of T. castaneum consensus genome maps with range of parameters. Detailed assembly metrics for assembled consensus genome maps using strict, default and relaxed “-T” parameter, p-value threshold are named Relaxed-T, Default-T and Strict-T respectively. The best “-T” parameter was used for two additional assemblies with either relaxed minimum molecule map length (relaxed-minlen) of 100 kb, rather than the 150 kb default, or a strict minimum molecule map length (strict-minlen) of 180 kb. (CSV 389 kb)
DOI: 10.6084/m9.figshare.c.3628088_d3.v1
title: Additional file 1: of Molecular profile of dissociative drug ketamine in relation to its rapid antidepressant action

description: Results from three-way ANOVA for 52 drug-responsive transcripts (FDR for drug factor  0.5 at least at one time point for any substance) are included. For each transcript a p-value and percent FDR for drug, time and tissue factors and all the interactions are presented. (XLSX 19 kb)
DOI: 10.17863/cam.21082
title: Data supporting NSPN publication "Structural covariance networks are coupled to expression of genes enriched in supragranular layers of the human cortex " Neuroimage

description: Gene expression matrices for the Desikan-Killiany atlas (68 regions) and the high-resolution parcellation that includes 308 regions of 500m2 each.
DOI: 10.6084/m9.figshare.c.3628088_d4.v1
title: Additional file 6: of Molecular profile of dissociative drug ketamine in relation to its rapid antidepressant action

description: The table summarizing results of gene expression profiling of ketamine effects in the mouse striatum using RNA-seq (n = 4). In the first sheet 23 genes regulated by ketamine selected from the microarray profiling are listed with their chromosome location, fold change over control, p-value and FDR. The second sheet presents a list of the 15 selected genes with significant differences in expression between ketamine-treated and saline controls (p
DOI: 10.6084/m9.figshare.c.3628088_d5.v1
title: Additional file 2: of Molecular profile of dissociative drug ketamine in relation to its rapid antidepressant action

description: The lists of transcript IDs and gene names corresponding to Venn diagrams for the hippocampus and striatum are presented in the first and second sheet respectively. Column names indicate which drugs alter the expression of listed transcripts. In case where only one substance name is listed, the altered expression level is drug-specific (at p  0.3 at least at one of the time points in the analyzed tissue). (XLSX 12 kb)
DOI: 10.17863/cam.51209
title: Supporting data for A general criterion for the release of background potential energy through double diffusion

description: This directory contains a set of Matlab/Octave scripts used to run the simulations reported in Middleton and Taylor, 2020 (Journal of Fluid Mechanics). For more information and usage instructions, please refer to the UsersGuide.pdf in the 'docs' folder.
DOI: 10.6084/m9.figshare.c.3628088_d6.v1
title: Additional file 3: of Molecular profile of dissociative drug ketamine in relation to its rapid antidepressant action

description: The results of functional enrichment analysis performed with Enrichr tool for two clusters of genes significantly altered by the selected NMDA antagonists. The table consists of an enriched term, a number of input genes in the pathway (overlap), p-value (pâ
DOI: 10.6084/m9.figshare.c.3628115_d2.v1
title: Additional file 9: of 
                     De novo assembly and characterisation of the field pea transcriptome using RNA-Seq

description: Transcript expression for each tissue. (A) This file details contigs expression for the individual (tissue-specific) libraries after alignment to the Kaspa assembly. (B) This file details contigs expression for the individual (tissue-specific) libraries after alignment to the Parafield assembly. (ZIP 20813Â kb)
DOI: 10.17863/cam.36007
title: Research Data supporting "The role of prediction error and memory destabilization in extinction of cued-fear within the reconsolidation window'"

description: 'Data pooled ifen experiments' represents freezing data for pharmacological manipulation of retrieval extinction. "Data+pooled+Sch+experiments' represents data that is scoring of freezing after cued fear conditioning for retrieval-extinction experiments.