cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23668/psycharchives.3076
title: Dispositional mindfulness and executive functioning [Dataset]
title: Executive functioning is related to disposicional mindfulness in the general population

description: Previous research shows that dispositional mindfulness is related to cognitive aspects. The relationship between executive functions and dispositional mindfulness is poorly studied. The aim of this work is to characterize the executive functioning associated with dispositional mindfulness. Dispositional mindfulness was evaluated in 90 undergraduates through the Mindful Attention Awareness Scale. In addition, inhibition (Stroop task), cognitive flexibility (rule shift cards), processing speed (digit symbol substitution test), planning (zoo map test) and abstract reasoning (similarities test) were used to evaluate executive function. A multiple hierarchical regression analysis was carried out to predict dispositional mindfulness based on performance in the executive function tests and the individual’s age and sex. Age and sex accounted for 0.7% of dispositional mindfulness. Inhibition and cognitive flexibility accounted for 10.8% and 6%, respectively, of dispositional mindfulness, while processing speed and abstract reasoning explained 3.5% and 0.8%, respectively. Lastly, planning accounted for 0% of dispositional mindfulness. Individual differences in self-reported dispositional mindfulness may be caused by differences in executive performance. The good management of cognitive flexibility, the ability to inhibit and the ability to process stimuli more quickly play a crucial role in attending to current experience.
description: Dataset for: Molina-Rodríguez, S., Ros-León, A. & Pellicer-Porcar, O. Characterizing the executive functioning associated with dispositional mindfulness. Curr Psychol (2021). https://doi.org/10.1007/s12144-021-01782-9
DOI: 10.6084/m9.figshare.c.3603494_d3.v1
title: Additional file 3: Table S3. of High prevalence of multidrug resistant Enterobacteriaceae isolated from outpatient urine samples but not the hospital environment in Bo, Sierra Leone

description: Sensitivity testing results of non-Enterobacteriaceae environmental isolates. Results of sensitivity testing of environmental isolates other than Enterobacteriaceae using disk diffusion method. (XLSX 62 kb)
DOI: 10.6084/m9.figshare.c.3603509_d1.v1
title: MOESM2 of Liver cirrhosis mortality, alcohol consumption and tobacco consumption over a 62Â year period in a high alcohol consumption country: a trend analysis

description: Additional file 2. Data file 2 (substance use disorder treatments).
DOI: 10.6084/m9.figshare.c.3603515_d1.v1
title: Additional file 1: of The epigenetic signature of subcutaneous fat cells is linked to altered expression of genes implicated in lipid metabolism in obese women

description: Additional tables with data on DMS and differentially expressed genes between obese cases versus never-obese controls Table S1. Differentially methylated DNA sites linked to genes between obese and never-obese women. Table S2. Differentially expressed genes between obese and never-obese women. Table S3. Differentially DNA methylated sites accompanied by differential expression. Table S4. Differentially expressed genes with DMS in Adipogenesis, Insulin Signaling, and Fatty Acid Biosynthesis pathways. Table S5. Differentially expressed genes with DMS in candidate genes for BMI according to GWAS. Table S6. Differentially expressed genes with DMS in candidate genes for fat distribution according to GWAS. Table S7. DMS in WAT in relation to obesity. Table S8. DMS in WAT in relation to weight loss (Benton MC et al., Genome Biology 2015). Table S9. DMS in WAT in relation to BMI (Rönn T et al., Human Molecular Genetics 2015). Table S10. DMS in WAT in relation to T2D (Nilsson E et al., Diabetes 2014). (XLSX 5076 kb)
DOI: 10.6084/m9.figshare.c.3603509_d2.v1
title: MOESM1 of Liver cirrhosis mortality, alcohol consumption and tobacco consumption over a 62Â year period in a high alcohol consumption country: a trend analysis

description: Additional file 1. Data file 1 (alcohol liters, cigarette equivalents, liver cirrhosis death cases).
DOI: 10.6084/m9.figshare.c.3603509_d3.v1
title: MOESM3 of Liver cirrhosis mortality, alcohol consumption and tobacco consumption over a 62Â year period in a high alcohol consumption country: a trend analysis

description: Additional file 3. Data file 3 (hospital treatment cases).
DOI: 10.6084/m9.figshare.c.3603527_d1.v1
title: Additional file 1: of Do schistosome vaccine trials in mice have an intrinsic flaw that generates spurious protection data?

description: Spreadsheet calculations documenting the predicted migration profile of schistosomula when the probablility of getting stuck in the lungs on each circuit of the vascular system is modified. a Cercarial challenge, maturation in the naive mouse = 32 %. b Intravenous injection of day 7 schistosomula to the pulmonary vasculature, maturation = 50 %. c Cercarial challenge of an antigen-vaccinated mouse, 40 % protection. d Ditto, 70 % protection. (XLSX 31.2Â kb)
DOI: 10.23668/psycharchives.3078
title: Dataset: Automatic Covert Attentional Capture in Multiple Object Tracking

description: Multiple Object Tracking (MOT) is assumed to be handled by bottom-up (e.g. Pylyshsyn & Storm, 1988) or top-down processes of selection (e.g. Yantis, 1992) or both (e.g. Oksama & Hyönä, 2008) – depending on the model assumed. The Attentional Capture (AC) paradigm (e.g. Yantis & Jonides, 1984) is regularly employed to demonstrate influences of bottom-up and/or top-down attentional control. It has up to now not been used to assess influences of irrelevant stimuli in MOT. We investigated whether AC does occur in MOT: Are irrelevant stimuli processed at all in dynamic attentional tasks? We found that sudden onset singletons were effective in lowering probe detection thus demonstrating AC. Tracking performance as dependent measure was not affected. The AC effect persisted in conditions of higher tracking load (experiment 2) and was dramatically increased in lower presentation frequency (experiment 3). We discuss that a stable representation of the tracking array in visual working memory allows managing strong disruptions of attention during tracking.
DOI: 10.6084/m9.figshare.c.3603536_d8.v1
title: Additional file 8: Table S8. of Efficient generation of patient-matched malignant and normal primary cell cultures from clear cell renal cell carcinoma patients: clinically relevant models for research and personalized medicine

description: Differentially expressed genes between matched tumor tissue and VHLmut cultures. (XLSX 1.05 mb)
DOI: 10.6084/m9.figshare.c.3603536_d10.v1
title: Additional file 2: Table S2. of Efficient generation of patient-matched malignant and normal primary cell cultures from clear cell renal cell carcinoma patients: clinically relevant models for research and personalized medicine

description: Primers for VHL sequencing. (XLS 35 kb)
DOI: 10.6084/m9.figshare.c.3603536_d9.v1
title: Additional file 7: Table S7. of Efficient generation of patient-matched malignant and normal primary cell cultures from clear cell renal cell carcinoma patients: clinically relevant models for research and personalized medicine

description: Genes associated with the VHLmut networks shown in Fig. 6. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3603614_d4.v1
title: Additional file 3: of Uncovering obsessive-compulsive disorder risk genes in a pediatric cohort by high-resolution analysis of copy number variation

description: Table S2 (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3603641_d1.v1
title: Additional file 1: of Technical efficiency of womenâ  s health prevention programs in Bucaramanga, Colombia: a four-stage analysis

description: Input and output variables for DEA analysis in three womenÂ´s health programs. (XLS 47 kb)
DOI: 10.6084/m9.figshare.c.3603674_d1.v1
title: Additional file 1: Table S1. of Diversity of susceptible hosts in canine distemper virus infection: a systematic review and data synthesis

description: Full database of CDV infection in non-dog hosts. (XLSX 31Â kb)
DOI: 10.6084/m9.figshare.c.3603698_d3.v1
title: Additional file 2 of Estimating transmission probability in schools for the 2009 H1N1 influenza pandemic in Italy

description: Files of data on school A. Each row corresponds to a student for which we received the filled questionnaire. In the column ‘classe’ there is the name of the class (the 1st digit is the grade); in ’nstud’ the number of students in that class; in ‘infected’ whether that student showed ILI symptoms (1) or not (0); in ‘home’ the number of household members infected before that student (−1 if infected =0); ’day’ and ’month’ the date of ILI occurrence (−1 if infected =0). (TXT 4 kb)
DOI: 10.6084/m9.figshare.c.3603713_d1.v1
title: Additional file 5 of Common disease signatures from gene expression analysis in Huntingtonâ  s disease human blood and brain

description: Gene identifiers of blood modules associated with HD. In this file we include the gene identifiers that constitute each module in blood that is associated with HD. (XLS 84 kb)
DOI: 10.6084/m9.figshare.c.3603779_d1.v1
title: MOESM2 of Characterization of asteroid analogues by means of emission and reflectance spectroscopy in the 1- to 100-µm spectral range

description: Additional file 2. XRF pattern for terrestrial enstatite (Norway) described in this study.
DOI: 10.6084/m9.figshare.c.3603782_d1.v1
title: Additional file 5: Table S2. of Emergence and evolution of yeast prion and prion-like proteins

description: Gene Ontology process category enrichments. (TXT 1 kb)
DOI: 10.6084/m9.figshare.c.3603788_d2.v1
title: Additional file 1: Table S1. of Development of foraging skills in two orangutan populations: needing to learn or needing to grow?

description: Overview of the data used for the different analyses. Study site, focal individual, sex and date of birth of the focal individual, mother of the focal individual, as well as the years in which the different types of data (diet data, feeding rates, ramble ratios and laser measurements) were taken. Table S2. GLMM with absolute feeding rate of the adult females as dependent variable. To see if the if there is a difference between feeding rates obtained by video coding as opposed to direct observation this was included as as a binary variable (“Video”). Shown are effects, estimates, standard errors and p-values as well as number of levels for the categorical variables. The number in parentheses represents the total number of individual feeding rates included in the analyses: Only rates of fruits on which we had data from the same individual obtained via video coding as well as via direct observation were included. Table S3. GLMM with feeding rate in percentage of the mothers feeding rates as a dependent variable. To see if the presence absence of a simultaneous feeding rate taken on the mother has an effect it was included as a binary variable (“Simultaneous mother sample”). Effects, estimates, standard errors and p-values as well as number of number of levels for the categorical variables and AIC values of the models. The number in parentheses represents the total number of individual - age - species combinations.  Table S4. GLMM with feeding rate of the Tuanan immatures in percentage of the mothers feeding rates as a dependent variable without (a) and with fruit toughness and size included as a fixed effect (b). Effects, estimates, standard errors and p-values as well as number of levels for the categorical variables and AIC values of the model. (ZIP 23 kb)
DOI: 10.6084/m9.figshare.c.3603815_d3.v1
title: Additional file 2: Table S2. of CAZyChip: dynamic assessment of exploration of glycoside hydrolases in microbial ecosystems

description: Summary of probes sequences on the CAZyChip, BC_scores and the accession number of associated gene. (XLSX 8992 kb)
DOI: 10.6084/m9.figshare.c.3603815_d4.v1
title: Additional file 1: Table S1. of CAZyChip: dynamic assessment of exploration of glycoside hydrolases in microbial ecosystems

description: Primers sequences used for real-time qPCR quantification. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3603836_d1.v1
title: Additional file 6: Table S6. of Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum

description: Confirmation of RT-PCR amplicons by sequencing and BLASTn against respective sRNA sequences (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3603839_d1.v1
title: Additional file 1: of HybriFree: a robust and rapid method for the development of monoclonal antibodies from different host species

description: Sequences of the primers used in VH and VL cDNA amplification for scFv-Fc construction. This file contains primer sequences used in the study for amplification of chicken, mouse or rabbit VH and VL domain cDNAs. Additional 5â   nucleotides forming the overlapping region with the vector for CPEC cloning or the coding sequence of the flexible linker between the VH and VL domains are indicated. In addition, proportion of each primer in the cocktail is indicated. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3603815_d5.v1
title: Additional file 3: Table S3. of CAZyChip: dynamic assessment of exploration of glycoside hydrolases in microbial ecosystems

description: Nucleic sequences of fosmids from metagenomic study. (XLSX 57 kb)
DOI: 10.6084/m9.figshare.c.3603860_d1.v1
title: Additional file 1: of Factors associated with self-reported health: implications for screening level community-based health and environmental studies

description: Table S1. Sociodemographic Domain; Table S2. Health Care Domain; Table S3. Health Status Domain; Table S4. Lifestyle Domain; Table S5. Clinical Indicators; Table S6. Environmental Scores/Chemicals). This file details all associations between the domain factors and poorer SRH for both binary (poor/fair versus good/very good/excellent) and ordinal 5-point scoring of SRH (1 = poor, 2 = fair, 3 = good, 4 = very good, and 5 = excellent). (XLSX 45 kb)
DOI: 10.6084/m9.figshare.c.3603836_d4.v1
title: Additional file 5: Table S5. of Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum

description: Conservation analysis in Soft Rot Enterobacteriaceae (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.c.3603836_d5.v1
title: Additional file 1: Table S1. of Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum

description: Complete list of RNA-seq detected sRNAs (XLSX 19Â kb)
DOI: 10.6084/m9.figshare.c.3603836_d7.v1
title: Additional file 3: Table S3. of Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum

description: List of in silico predicted sRNAs using RITs from WebGester DB. S2A: Forward strand predictions. S2B: Complementary strand predictions (XLSX 30Â kb)
DOI: 10.6084/m9.figshare.c.3603881_d5.v1
title: Additional file 7: of Genome-wide mapping of Hif-1Îą binding sites in zebrafish

description: Wild-type ChIP sequencing peaks filtered for presence of a HRE. Filtering performed using MACS. (BED 2 kb)
DOI: 10.6084/m9.figshare.c.3603890_d4.v1
title: Additional file 4: of Insights into the innate immunome of actiniarians using a comparative genomic approach

description: PAML results using the Yang and Nielsen [33] method. PAML results for complete sequences only of TLR, MyD88, NF-ÎşB, TMD-containing NLRs, Novel Gene 1, Novel Gene 2 and Novel Gene 3. (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.c.3603881_d6.v1
title: Additional file 4: of Genome-wide mapping of Hif-1Îą binding sites in zebrafish

description: Unfiltered ChIP sequencing peaks for vhl mutants. (BED 116 kb)
DOI: 10.6084/m9.figshare.c.3603896_d4.v1
title: Additional file 3: of Bridging the gap between pragmatic intervention design and theory: using behavioural science tools to modify an existing quality improvement programme to implement â  Sepsis Sixâ

description: Interview data TDF coding and thematic analysis. (XLSX 98Â kb)
DOI: 10.6084/m9.figshare.c.3603899_d3.v1
title: Additional file 1: of Somatic drivers of B-ALL in a model of ETV6-RUNX1; Pax5
                +/â  
               leukemia

description: List of targeted exome baits. The file contains a list of genes that were captured as part of the targeted exome sequencing performed as part of this study. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.c.3603881_d7.v1
title: Additional file 10: of Genome-wide mapping of Hif-1Îą binding sites in zebrafish

description: Comparison of zebrafish and Human data on HIF target genes. Sheet 1: collated list of HIF targets based on [65] with fish orthologues and peak positions. A similar analysis of a random sample of genes is also given, Sheet 2: Analysis of a experimentally verified peaks in well-known targets. Sheet 3: Analysis of overlap of top ChIP-seq peaks from [34], Sheet 4: Genes from SchĂśdel with peaks close to TSS, stating overlap with zebrafish orthologues with peaks close to TSS. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.c.3603881_d8.v1
title: Additional file 5: of Genome-wide mapping of Hif-1Îą binding sites in zebrafish

description: vhl ChIP sequencing peaks filtered for presence of a HRE. Filtering performed using MACS. (BED 70 kb)
DOI: 10.6084/m9.figshare.c.3603926_d1.v1
title: Additional file 1: of Topology based identification and comprehensive classification of four-transmembrane helix containing proteins (4TMs) in the human genome

description: Contains the UniProt identifications, gene symbols, and Ensembl protein identifications for the classification of the 494 valid 4TM dataset. Also included within the table is the following information: signal peptides, topology, Pfam domains, functional classifications, review status, CCDS identifier, and gene-disease associations. (XLSX 176 kb)
DOI: 10.6084/m9.figshare.c.3603881_d9.v1
title: Additional file 1: of Genome-wide mapping of Hif-1Îą binding sites in zebrafish

description: Gene Expression Changes in vhl mutant zebrafish. The list of fully-annotated genes which were differentially regulated with a fold change â Ľ 2 in vhl mutants versus wild-type at 4dpf. Contains; Probe ID, Fold Change, Log Fold Change, Unigene Description, Unigene ID and Gene Symbol. (XLSX 65 kb)
DOI: 10.6084/m9.figshare.c.3603947_d6.v1
title: MOESM5 of Enhancing antibody folding and secretion by tailoring the Saccharomyces cerevisiae endoplasmic reticulum

description: Additional file 5. Result from the frequency analysis showing the strains in the 95th and 5th percentile of individual measurements of specific product yield in each temperature and strain background. To determine which strains were enriched among the highest and lowest values of specific product yield, we conducted a frequency analysis for each strain background, separately for each temperature. Frequency represents the absolute count of measurements from the strain inside the percentile and the relative frequency is the frequency normalized to the total count of measurements in the percentile. P values were calculated with Wilcoxon signed rank test using the respective background strain measurements in the same temperature as the reference.
DOI: 10.6084/m9.figshare.c.3603881_d15.v1
title: Additional file 6: of Genome-wide mapping of Hif-1Îą binding sites in zebrafish

description: Unfiltered ChIP sequencing peaks for wild-type. (BED 56 kb)
DOI: 10.6084/m9.figshare.c.3603962_d2.v1
title: Additional file 2: Text S1. of Identification of prohormones and pituitary neuropeptides in the African cichlid, Astatotilapia burtoni

description: Predicted A. burtoni prohormone and related sequences in FASTA format. All A. burtoni prohormone and protein convertase sequences and names as predicted by in silico search. (FA 44Â kb)
DOI: 10.6084/m9.figshare.c.3603962_d3.v1
title: Additional file 4: Table S3. of Identification of prohormones and pituitary neuropeptides in the African cichlid, Astatotilapia burtoni

description: A. burtoni pituitary peptides identified from tandem MS. Sequences and protein assignments of pituitary peptides detected by tandem MS. (CSV 87Â kb)
DOI: 10.6084/m9.figshare.c.3603947_d7.v1
title: MOESM7 of Enhancing antibody folding and secretion by tailoring the Saccharomyces cerevisiae endoplasmic reticulum

description: Additional file 7. List of all the plasmids in our overexpression library. Overview of all ER-resident protein expression plasmids used in this study. Original name, promoter, expressed gene and the corresponding auxotrophic marker are mentioned. All plasmids contain the cyc1 terminator.
DOI: 10.6084/m9.figshare.c.3603953_d8.v1
title: Additional file 1: Table S1. of Comparative transcriptome investigation of global gene expression changes caused by miR156 overexpression in Medicago sativa

description: Assembled alfalfa transcriptome. All the de novo assembled alfalfa transcripts that were obtained from Trinity program. (ZIP 51914Â kb)
DOI: 10.6084/m9.figshare.c.3603962_d5.v1
title: Additional file 3: Table S2. of Identification of prohormones and pituitary neuropeptides in the African cichlid, Astatotilapia burtoni

description: Pituitary MALDI-TOF peptides confirmed by tandem MS. Sequences and masses peptides detected by both MALDI-TOF and tandem MS. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3604028_d2.v1
title: Additional file 2: Table S2. of Genome-wide analyses of chitin synthases identify horizontal gene transfers towards bacteria and allow a robust and unifying classification into fungi

description: Correspondence between the published chitin synthase classifications (1992–2016) (first tab) and their references (second tab). (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3603989_d10.v1
title: Additional file 4: of Single-molecule real-time transcript sequencing facilitates common wheat genome annotation and grain transcriptome research

description: List of 290 FLNC reads showing cross-contig mapping. (XLS 40Â kb)
DOI: 10.6084/m9.figshare.c.3603989_d11.v1
title: Additional file 6: of Single-molecule real-time transcript sequencing facilitates common wheat genome annotation and grain transcriptome research

description: List of 3026 newly discovered loci and their annotations. (XLS 266Â kb)
DOI: 10.6084/m9.figshare.c.3604028_d4.v1
title: Additional file 16: File S2. of Genome-wide analyses of chitin synthases identify horizontal gene transfers towards bacteria and allow a robust and unifying classification into fungi

description: ML phylogeny used to place the root in Fig. 4. (TXT 5 kb)
DOI: 10.6084/m9.figshare.c.3604046_d1.v1
title: Additional file 3: Tables S6â  13. of Culture-independent genomic characterisation of Candidatus Chlamydia sanzinia, a novel uncultivated bacterium infecting snakes

description: Plasmid protein homology. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.c.3604028_d15.v1
title: Additional file 13: Table S6. of Genome-wide analyses of chitin synthases identify horizontal gene transfers towards bacteria and allow a robust and unifying classification into fungi

description: Eukaryotic species analyzed in this study. (XLSX 17 kb)
DOI: 10.60656/c3d69cb6bc1f4f6f
title: Custom collection of ice water content data from Bucharest, Chilbolton, Galați, Granada, Hyytiälä, and 10 other sites between 1 and 31 Aug 2023
DOI: 10.6084/m9.figshare.c.3604163_d7.v1
title: Additional file 2: of More comprehensive forensic genetic marker analyses for accurate human remains identification using massively parallel DNA sequencing

description: Ancestry-informative SNP results for 140-year-old skeletal remains from Deadwood, Dakota using the A) Illumina® ForenSeq™ panel and B) HID-Ion AmpliSeq™ Ancestry Panel. Concordant results for the 53 ancestry-informative SNPs that were common between the two assays were used to generate a composite AIMS profile (C). (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3604211_d2.v1
title: Additional file 1: of Health promoting practices and personal lifestyle behaviors of Brazilian health professionals

description: Project GUIA’s physicians and nurses survey and community health workers survey. (ZIP 3240 kb)