cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48804/eqtwce
title: Histological analysis of extraocular muscles

description: Cross-sections of human extra-ocular muscle tissue immunohistochemically stained to visualize T-lymphocytes (CD3 and CD8), B-lymphocytes (CD20 and CD138), macrophages (CD68) and lymphatic vessels (D2-40 Podoplanin). All staining have been performed using images which have been acquired with Nanozoomer-SQ (Hamamatsu) slide scanner. Images can be visualized with NDP.view2 software, which can be downloaded for free.
description: NDP.view2 software
DOI: 10.48804/b1562d
title: The impact of negative and positive affect on craving, non-heavy alcohol use, and binge drinking in patients with alcohol use disorder and controls: An experience sampling method study.

description: Dataset used for the publication 'The impact of negative and positive affect on craving, non-heavy alcohol use, and binge drinking in patients with alcohol use disorder and controls: An experience sampling method study.' This includes the preprocessed ESM data and script in R used to analyse the ESM data (primary hypotheses, exploratory analyses, plots) as well as the script in R to determine the random effects structures od the mixed-models used in the analyses. You can ask to access the data to check the analyses that were performed in the paper. If you want to perform secondary analyses on the data, then you should first ask permission of the authors, to ensure that there is no conflict.
DOI: 10.48804/x7pjrd
title: Orofacial quantitative sensory testing benchmark values

description: Quantitative sensory testing (QST) is a valuable tool in the assessment of orofacial somatosensory dysfunction. Normal values have already been recorded for some parts of the face and mouth, but not for the complete innervation area of the trigeminal nerve. The aim of this pilot study is to inform a large-scale clinical trial generating a database on orofacial quantitative sensory testing benchmark values and to evaluate differences across anatomic subsets within this area.

In ten healthy volunteers, a standardized QST battery was applied to 24 regions (14 extraoral and 10 intraoral) innervated by the trigeminal nerve. Descriptive statistics were applied to compare different regions.
DOI: 10.48804/a3v0z4
title: Replication Data for: Robust Design Optimization of Expensive Stochastic Simulators Under Lack-of-Knowledge

description: This dataset contains the numerical model of a crashbox (LS-DYNA key file). The dataset includes a python script that can be used to manipulate the parameters t1, t2, and tsw as described in the paper. In addition, a python script is included to model spatial uncertainty of adjacent components as was proposed in an earlier publication. A read me file in included that contains an example and more details. Solving the numerical model requires an active LS-DYNA license.
DOI: 10.48804/amsyvo
title: Replication Data for: Current insights into the metabolome during hypothermic kidney perfusion – a scoping review

description: This dataset is the data extraction table of a scoping review performed to assess metabolome changes during hypthermic kidney perfusion. The final search was carried out on February 2nd, 2023.
DOI: 10.48804/gwmgeb
title: Le Corbusier Media Mentions 1921-1965

description: This data set contains a selection of significant media mentions and features from across historic newspapers in Germany, France, Belgium, the US, Australia, Austria and Switzerland, of the French-Swiss Modernist architect Le Corbusier from 1921-1965. It was compiled as part of a project (The Rise of the Technocelebrity: The Politics Of Social Expertise In The Public Careers Of Le Corbusier And Walter Gropius) in order to explore the relation of experts and celebrity in the 20th century through the cases of two exemplary architects, Le Corbusier and Walter Gropius. It provides information on the title, the nature of the article, the publication date, location and links to digitized copies of the articles from their original location in media repositories.
DOI: 10.48804/qt0k2j
title: Online supplement to "Regional beat-to-beat variability of repolarization increases during ischemia and predicts imminent arrhythmias in a pig model of myocardial infarction"

description: Online supplement to "Regional beat-to-beat variability of repolarization increases during ischemia and predicts imminent arrhythmias in a pig model of myocardial infarction" submitted to American Journal of Physiology-Heart and Circulatory Physiology.

Abstract
Background 
Ventricular arrhythmia (VT/VF) can complicate acute myocardial ischemia (AMI). Regional instability of repolarization during AMI contributes to the substrate for VT/VF. Beat-to-beat variability of repolarization (BVR), a measure of repolarization lability increases during AMI. We hypothesized that its surge precedes VT/VF. We studied the spatial and temporal changes in BVR in relation to VT/VF during AMI.
Methods
In 24 pigs BVR was quantified on 12-lead electrocardiogram (ECG) recorded at a sampling rate of 1kHz. AMI was induced in 16 pigs by percutaneous coronary artery occlusion (MI), while 8 underwent sham-operation (Sham). Changes in BVR were assessed at 5-minutes after occlusion, 5- and 1-minute pre-VF in animals that developed VF and matched time points in pigs without VF. Serum troponin and ST deviation were measured. After 1-month, magnetic resonance imaging and VT induction by programmed electrical stimulation were performed.
Results
During AMI, BVR increased significantly in inferior-lateral leads correlating with ST-deviation and troponin increase. BVR was maximal 1-minute pre-VF (3.78±1.36 vs 5-minutes pre-VF: 1.67±1.56, P &lt; 0.0001). After 1-month, BVR was higher in MI than sham and correlated with the infarct size (1.43±0.50, vs 0.57±0.30, P = 0.009). VT was inducible in all MI animals and the ease-of-induction correlated with BVR. 
Conclusion
BVR increased during AMI and temporal BVR changes predicted imminent VT/VF supporting a possible role in monitoring and early-warning systems. BVR correlated to arrhythmia vulnerability suggesting utility in risk stratification post-AMI. 

This supplement contains additional analysis and figures not included in the original publication.
DOI: 10.48804/hcssje
title: Replication Data for: Neutrophil Peptidylarginine Deiminase 4 is Essential for Detrimental Age-related Cardiac Remodeling & Dysfunction in Mice

description: This is the full data set for the manuscript titled "Neutrophil Peptidylarginine Deiminase 4 is Essential for Detrimental Age-related Cardiac Remodeling & Dysfunction in Mice," with each tab containing the per-mouse or per-replicate data of each figure panel in this manuscript. Outliers are indicated in blue font with an asterisk and have been excluded from statistical analysis. Outliers were identified using the ROUT method in GraphPad Prism version 9.0. This data includes quantitative measurements of blood cells, heart function and structure data by echocardiography, and cytokine and NET-related measurements made in plasma prepared from whole blood in mice.
DOI: 10.48804/9wskbk
title: Replication Data for: Multimodal stance-taking – A systematic literature review

description: Dataset containing video-excerpts for qualitative analysis and gaze behavior measures for quantitative analysis, as well as R script to reproduce the results and figures for the paper "Multimodal stance-taking – A systematic literature review".
DOI: 10.48804/ipoil9
title: X-ray scattering replication data for: Radiolytic degradation of cellulosic materials in nuclear waste: effect of oxygen and absorbed dose

description: This dataset contains wide-angle X-ray scattering data for cellulose tissues exposed to varying levels of gamma radiation under different atmospheres. The data was used to assess the effect of gamma irradiation on the crystal structure of cellulosic materials under different atmospheric conditions (air or argon). The calculated crystallinity results are also included.
description: SPEC (Certified scientific software), 6.08.04
description: XSACT (Xenocs), 2.6
description: TOPAS-academic, 6
DOI: 10.48804/jd7ufx
title: Network representations of the relationships between propositions in Proclus' Elementatio Theologiae (ET) according to Dodds', Trouillard's, and Onnasch-Schomakers' editions.

description: This dataset contains representations of the relations of logical dependency of propositions in Proclus' Elementatio Theologiae (ET), based on the annotations of Dodds', Trouillard's, and Onnasch-Schoemaker's editions of the text.

Proclus. 1963. The Elements of Theology. A Revised Text with Translation, Introduction, and Commentary by E. R. Dodds. 2nd ed., Oxford: Clarendon Press. (1st ed. 1933)

Proclus. 1965. Éléments de Théologie. Traduction, introduction et notes par J. Trouillard, Paris: Aubier. 

Proclus. 2015. Theologische Grundlegung. Übersetzung und Kommentar von E.-O. Onnasch und B. Schomakers, Hambourg: Meiner.
DOI: 10.48804/obldwe
title: Person-specific and Pooled Prediction Models for Binge eating, Alcohol Use and Binge Drinking in Bulimia Nervosa and Alcohol Use Disorder: An Experience Sampling Method Study.

description: Dataset and scripts used for the manuscript called 'Person-specific and Pooled Prediction Models for Binge eating, Alcohol Use and Binge Drinking in Bulimia Nervosa and Alcohol Use Disorder: An Experience Sampling Method Study.' 

The dataset was gathered with the use of the experience sampling method and contains data concerning the mood, behavior, and context of patients with bulimia nervosa and/or an alcohol use disorder in daily life.

The scripts construct an elastic net regularised regression model with nested-cross validation on a person-specific and on a pooled level.
DOI: 10.48804/d4dplj
title: Dataset of lead isotope ratios of lead ores.

description: This database was compiled from the literature.
All samples analysed prior to 1980 are excluded, due to poorer precision before that date.
The ores have been placed in groups corresponding to countries or important regions.
In most papers the ratios 208Pb/206Pb, 207Pb/206Pb and 206Pb/204Pb were given. The ratios 208Pb/204Pb and 207Pb/204Pb shown have been calculated from the other values.
All samples which were published with only two isotope ratios are excluded.
DOI: 10.48804/p3wwqr
title: A Survey of Irish Writers in The New Yorker, 1940-1980

description: &lt;p&gt;This dataset provides a survey of Irish writers publishing in &lt;i&gt;The New Yorker&lt;/i&gt; magazine from 1940 to 1980.&lt;/p&gt;

&lt;b&gt;Methodology&lt;/b&gt;
&lt;p&gt;I conduct the survey through archival research and secondary references. The primary sources are &lt;i&gt;The New Yorker&lt;/i&gt;'s digital archive and the &lt;i&gt;New Yorker&lt;/i&gt; Records housed in the New York Public Library.&lt;/p&gt;

&lt;b&gt;Parameters&lt;/b&gt;
&lt;p&gt;The timeframe of the survey concerns &lt;i&gt;The New Yorker&lt;/i&gt;’s international expansion in the middle decades of the twentieth century. It starts from 1940 and ends in 1980, when the magazine industry’s cultural impact was eclipsed by the popularity of TV. &lt;/p&gt;

&lt;p&gt;For the purpose of the project, I focus on "fiction" contributions. Verse and shorter writings (such as column pieces and book reviews) are not included. Therefore, Maeve Brennan's shorter pieces under her alias "the long-winded lady" and Patricia Collinge's shorter contributions are not included in the quantatative survey. &lt;/p&gt;

&lt;p&gt;This survey includes both Irish and Irish-American writers. One key criterium of the selection is the writer’s connection with Ireland and Irish culture. Irish-American writers whose works are more concerned about (Irish-)America rather than Ireland itself are excluded from the survey. Therefore, Elizabeth Cullinan and J.P. Donleavy are included, while John O’Hara and Mary McCarthy are not. &lt;/p&gt;

&lt;b&gt;Notes for Users&lt;/b&gt;
&lt;p&gt;The list is presented in the chronological order of the contributions’ appearance in the magazine. The date format follows the international convention (ISO8601), thus: year/month/day. The date refers to the publication of &lt;i&gt;The New Yorker&lt;/i&gt; issues.&lt;/p&gt;

&lt;p&gt;&lt;i&gt;The New Yorker&lt;/i&gt; is a weekly, and the timeframe of the project spans four decades. This means that there are thousands of back issues under examination. I acknowledge the possibility that there are Irish writers whose contributions in the magazine escaped my attention. If there is any omission, I would appreciate the user’s input to update the survey. &lt;/p&gt;

&lt;p&gt;It is hoped that this survey will help researchers investigate the Irish connections with one of America’s most influential publications. Teachers, students, and the general public may also use this list as a guide to better appreciate these fascinating Irish stories. &lt;/p&gt;
DOI: 10.48804/4x8ipy
title: Replication Data for: 'Challenges in identifying simple pattern-forming mechanisms in the development of settlements using demographic data'

description: Archived version of necessary data and figures for the manuscript, with additional data necessary to recreate certain figures: "Challenges in identifying simple pattern-forming mechanisms in the development of settlements using demographic data".
DOI: 10.48804/were8i
title: Code for: 'Challenges in identifying simple pattern-forming mechanisms in the development of settlements using demographic data'

description: Archived version of codes used in the manuscript: "Challenges in identifying simple pattern-forming mechanisms in the development of settlements using demographic data".
DOI: 10.48804/elwhrs
title: Audio samples: Real-time sound synthesis of pass-by noise: comparison of spherical harmonics and time-varying filters

description: Supplementary audio samples from the technical paper: Real-time sound synthesis of pass-by noise: comparison of spherical harmonics and time-varying filters.
The audio files are generated using a measured indoor pass-by noise dataset and represent pass-by noise scenarios using the two proposed techniques at different configurations.
DOI: 10.48804/ahti1a
title: Replication Data for: 'SpectrEM: Exploiting Electromagnetic Emanations During Transient Execution'

description: This dataset contains the EM side-channel traces used to produce the results and figures of 'SpectrEM: Exploiting Electromagnetic Emanations During Transient Execution'.
DOI: 10.48804/enbdgy
title: Replication Data for: Epoxide-based TFC membranes with tunable performance in the tight nanofiltration range

description: Here, we share the data and metadata of our publication 'Epoxide-based TFC membranes with tunable performance in the tight nanofiltration range', published in the Journal of Membrane Science. This dataset contains data on the performance and physicochemical properties of these newly developed membranes. Here, we share the raw data on membrane performance (water permeance and NaCl rejection) and the spectroscopic data of the membranes, as a function of the different synthesis parameters used (initiator nature and concentration, and epoxide nature). The spectroscopic data contains infrared and x-ray photoelectron spectroscopy data.
description: CasaXPS, 2.3.25PR1.0
description: ESCApe, 1.4
DOI: 10.48804/afxt1e
title: Replication Data for: "Nanoscale Chemical Patterning of Graphite at Different Length Scales"

description: Current dataset provides access to raw data and metadata related to the recent research on a template-assisted electrochemical nanopatterning of graphite where we use self-assembling molecules as molecular templates for pattern grafting aryl radicals on such surfaces.

Dataset contains scanning tunneling microscopy, atomic force microscopy, and Raman spectroscopic characterization of nanopatterned surfaces prepared by a template-assisted, electrochemical molecular pattern functionalization.

This research lead to a discovery of multilevel surface-patterning by potential control while using one of the molecular templates. A discussion of these results are published elsewhere (Nanoscale, 2023, DOI: 10.1039/D3NR00632H). The data may be used to evaluate and compare pattern-grafted surfaces prepared using similar approaches. The metadata contains methods of analysis that may be useful for researchers working on similar problems.
DOI: 10.48804/yywijz
title: MLR datasets of ancient Egyptian late Middle Kingdom Execration Figurines form the National Museum of Antiquities, Leiden

description: This data has been brought together in the context of the:
“Uniting the Separated: A Multifocal Contextualization of the Saqqara Execration Figurines” project, coordinated by Dennis Braekmans and Daniel Soliman, MCS stimulation grant (National Museum of Antiquities and Leiden University), 2022-2023. 

The .zun interactive images have been created with the Multispectral Microdome, i.e. Portable Light Dome system from the KU Leuven, Belgium; that is research equipment operated by KU Leuven Core Facility VIEW
These recordings can be consulted with the stand alone and browser interfaces published via https://portablelightdome.wordpress.com/software/.

The .tif images have been composed, based on full quality screenshots via the stand alone PLDviewer interface, by using Photoshop (v23). 

Operator for the Multispectral Microdome and composition of tif images: Hendrik Hameeuw (KU Leuven Core Facility VIEW)

The imaged objects are 11 unfired clay figurines originating from Saqqara, inventoried under accession numbers F 1941/8.2 to F 1941/8.12, and kept at the National Museum of Antiquities (Leiden, The Netherlands). They date to the late Middle Kingdom (c. 1850-1700 BC) and were identified as execration figurines.
description: PLDdigitize, 8
DOI: 10.48804/gxjabw
title: Replication Data for: ‘Novel Human/Non-Human Primate Cross-Reactive Anti-Transferrin Receptor Nanobodies for Brain Delivery of Biologics‘

description: This dataset contains raw data contributing to the publication ‘Novel Human/Non-Human Primate Cross-Reactive Anti-Transferrin Receptor Nanobodies for Brain Delivery of Biologics‘. This publication is about the discovery of nanobodies (variable domain of camelid heavy chain-only antibodies) binding both human and non-human primate transferrin receptor (TfR) that could serve as moieties to improve brain permeability of therapeutic antibodies. The blood-brain barrier (BBB), while being the gatekeeper of the central nervous system (CNS), is a bottleneck for the treatment of neurological diseases, as most of the biologicals do not reach their brain targets in sufficient quantities. Receptor-mediated transcytosis (RMT) is one physiological mechanism in which nutrients are recognized by specific receptors that are expressed on the surface of the endothelial cells, internalized in intracellular vesicles, and finally released in the brain parenchyma. Targeting such RMT receptors with antibodies or nanobodies is a strategy to increase the brain permeabilities of biologicals. Among these receptors, TfR is one of the most exploited RMT mechanisms for brain drug delivery. Here we report the discovery of two nanobodies that were able to bind human and cynomolgus TfRs, making these nanobodies more clinically relevant. Whereas nanobody BBB00515 bound cynomolgus TfR with 18 times more affinity than it did human TfR, nanobody BBB00533 bound human and cynomolgus TfR with similar affinities. When fused with an anti-beta-site amyloid precursor protein cleaving enzyme (BACE1) antibody (1A11AM), each of the nanobodies was able to increase its brain permeability after peripheral injection. A 40% reduction of brain Aβ1–40 levels could be observed in mice injected with anti-TfR/BACE1 bispecific antibodies when compared to vehicle-injected mice. In summary, we found two nanobodies that could bind both human and cynomolgus TfRs with the potential to be used clinically to increase the brain permeability of therapeutic biologicals.
DOI: 10.48804/robcti
title: Replication data for: “Bioaugmentation of a structural extracellular polymeric substances (EPS) producer to improve activated sludge bioflocculation: lessons learned”

description: Raw data and metadata related to the recent research on the augmentation of a fluorescent protein-producing Azoarcus communis in a lab-scale activated sludge bioreactor. The dataset contains fluorescence microscopy images, growth data, CFU counts of the augmented strain in the bioreactor, antibiotic resistance stability data, flocculation activity data, morphology data, and fluorescence quantification data. Additionally, a short macro for combined phase contrast and fluorescence microscopy image visualization has been included. A discussion of these results has been submitted elsewhere.
DOI: 10.48804/kmgklh
title: Not fleeting but lasting: Limited influence of aging on implicit adaptative motor learning and its short-term retention.

description: Data supporting the publication entitled "Not fleeting but lasting: Limited influence of aging on implicit adaptative motor learning and its short-term retention."

The dataset provides the data of a replication attempt of the following paper: https://pubmed.ncbi.nlm.nih.gov/25274819/

In this study, we measured total adaptation, implicit adaptation and spontaneous recovery of motor memories in a force-field paradigm in a group of 28 young participants and 20 older ones (55-70 years old). We failed to replicate the paper above and found no difference in total adaptation, implicit adaptation, and spontaneous recovery between the two age groups.

Code to analyse this data is available at https://github.com/jjodx/SpontaneousRecovery
DOI: 10.48804/m9fupt
title: Replication Data for: Synergistic survival-related effects of larval exposure to an aquatic pollutant and food stress get stronger during and especially after metamorphosis and shape fitness of terrestrial adults

description: This is the dataset used for the manuscript "Synergistic survival-related effects of larval exposure to an aquatic pollutant and food stress get stronger during and especially after metamorphosis and shape fitness of terrestrial adults". It contains the data from the complex life cycle of the damselfly Lestis viridis, from the aquatic larval to the terrestrial adult stage. Larvae were exposed to low food availability and the pollutant DNP. Life history, behavioral, and physiological variables were measured during both the larval and adult stages to study carry-over effects.
DOI: 10.48804/rfejgk
title: Higher order masked Saber

description: Masked implementations are necessary to prevent side-channel attacks on cryptographic algorithms. In this work, we provide higher-order side-channel attacks secure implementations of a post-quantum lattice-based scheme Saber. This repository contains the higher-order masked implementation of SABER on the ARM Cortex-M4 platform. Please note that these implementations have been published for demonstration and benchmarking purposes and have not gone through any leakage assessment.
DOI: 10.48804/0imqdf
title: MaMIMO-UAV 3D Channel State Information Dataset

description: A base station is placed on the parking lot in front of the ESAT building. It has a 8x8 rectangular patch antenna array pointing towards the sky.
A drone flew several trajectories on the campus of KULeuven, see figure 'measurements_plot.png', while transmitting pilot sequences.
The channel between the drone and a base station is estimated using the pilot sequences.