cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25550/3-jve6
title: Shh

description: **Abstract:** The mechanisms of morphogenesis are not well understood, yet shaping structures during development is essential for establishing correct organismal form and function. Here, Hu et al. (2015) examine mechanisms that help to shape the developing face during the crucial period of facial primordia fusion. This period of development is a time when the faces of amniote embryos exhibit the greatest degree of similarity, and it probably results from the necessity for fusion to occur to establish the primary palate. Their results show that hierarchical induction mechanisms, consisting of iterative signaling by Sonic hedgehog (SHH) followed by Bone morphogenetic proteins (BMPs), regulate a dynamic expression pattern of Shh in the ectoderm covering the frontonasal (FNP) and maxillary (MxP) processes. Furthermore, this Shh expression domain contributes to the morphogenetic processes that drive the directional growth of the globular process of the FNP toward the lateral nasal process and MxP, in part by regulating cell proliferation in the facial mesenchyme. The nature of the induction mechanism that we discovered suggests that the process of fusion of the facial primordia is intrinsically buffered against producing maladaptive morphologies, such as clefts of the primary palate, because there appears to be little opportunity for variation to occur during expansion of the Shh expression domain in the ectoderm of the facial primordia. Ultimately, these results might explain why this period of development constitutes a phylotypic stage of facial development among amniotes.
DOI: 10.25550/3-jvem
title: Fgf

description: **Abstract:** Robustness to perturbation is a fundamental feature of complex organisms. Mutations are the raw material for evolution, yet robustness to their effects is required for species survival. The mechanisms that produce robustness are poorly understood. Nonlinearities are a ubiquitous feature of development that may link variation in development to phenotypic robustness. Here, Green et al. (2017) manipulate the gene dosage of a signaling molecule, Fgf8, a critical regulator of vertebrate development. They demonstrate that variation in Fgf8 expression has a nonlinear relationship to phenotypic variation, predicting levels of robustness among genotypes. Differences in robustness are not due to gene expression variance or dysregulation, but emerge from the nonlinearity of the genotype–phenotype curve. In this instance, embedded features of development explain robustness differences. How such features vary in natural populations and relate to genetic variation are key questions for unraveling the origin and evolvability of this feature of organismal development.
DOI: 10.6084/m9.figshare.16610713
title: Boundary Optimisation Data

description: The reference and test sets required to build GP potentials of the CO<sub>2</sub>-CO<sub>2</sub>, CO<sub>2</sub>-Ne, CO-Ne, HF-Ne and HF-Na<sup>+</sup> interactions via sequential design. The final value in each row is the energy in Hartrees, while all preceding values are inverse interatomic distances between atoms on different molecules in Å<sup>-1</sup>. The ordering of the distances for each data set is as follows:<br>CO<sub>2</sub>-CO<sub>2</sub> - r<sub>oo</sub>, r<sub>oc</sub>, r<sub>oo</sub>, r<sub>oc</sub>, r<sub>cc</sub>, r<sub>oc</sub>, r<sub>oo</sub>, r<sub>oc</sub>, r<sub>oo</sub> CO<sub>2</sub>-Ne - r<sub>CNe</sub>, r<sub>ONe</sub>, r<sub>ONe</sub>CO-Ne - r<sub>CNe</sub>, r<sub>ONe</sub>HF-Ne - r<sub>HNe</sub>, r<sub>FNe</sub><br>HF-Na<sup>+</sup> - r<sub>HNa</sub>, r<sub>FNa</sub>.<br>All of these data sets follow a Latin hypercube design and were built using the methodology outlined in J. Chem. Phys. <b>147</b>, 161706 (2017) (found at https://aip.scitation.org/doi/full/10.1063/1.4986489).<br><br>
DOI: 10.6084/m9.figshare.16610713.v1
title: Boundary Optimisation Data

description: The reference and test sets required to build GP potentials of the CO<sub>2</sub>-CO<sub>2</sub>, CO<sub>2</sub>-Ne, CO-Ne, HF-Ne and HF-Na<sup>+</sup> interactions via sequential design. The final value in each row is the energy in Hartrees, while all preceding values are inverse interatomic distances between atoms on different molecules in Å<sup>-1</sup>. The ordering of the distances for each data set is as follows:<br>CO<sub>2</sub>-CO<sub>2</sub> - r<sub>oo</sub>, r<sub>oc</sub>, r<sub>oo</sub>, r<sub>oc</sub>, r<sub>cc</sub>, r<sub>oc</sub>, r<sub>oo</sub>, r<sub>oc</sub>, r<sub>oo</sub> CO<sub>2</sub>-Ne - r<sub>CNe</sub>, r<sub>ONe</sub>, r<sub>ONe</sub>CO-Ne - r<sub>CNe</sub>, r<sub>ONe</sub>HF-Ne - r<sub>HNe</sub>, r<sub>FNe</sub><br>HF-Na<sup>+</sup> - r<sub>HNa</sub>, r<sub>FNa</sub>.<br>All of these data sets follow a Latin hypercube design and were built using the methodology outlined in J. Chem. Phys. <b>147</b>, 161706 (2017) (found at https://aip.scitation.org/doi/full/10.1063/1.4986489).<br><br>
DOI: 10.5281/zenodo.5519370
title: epiGBS2: Improvements and evaluation of highly multiplexed, epiGBS-based reduced representation bisulfite sequencing

description: We present epiGBS2, a laboratory protocol based on epiGBS (Gurp et al., 2016) with a revised and user-friendly bioinformatics pipeline for a wide range of species with or without reference genome. Performance of several critical steps in epiGBS2 was evaluated against baseline data sets from <em>Arabidopsis thaliana</em> and Great tit (<em>Parus major</em>), which confirmed overall good performance of epiGBS2. We provide here the raw bisulfite sequencing data of the epiGBS2 run for <em>Arabidopsis thaliana.</em> A detailed description of the laboratory protocol and an extensive manual of the bioinformatics pipeline are publicly accessible on github (https://github.com/nioo-knaw/epiGBS2) and zenodo (https://doi.org/10.5281/zenodo.4764652).
DOI: 10.5519/qd.hmrsvklo
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (120 records)
DOI: 10.34740/kaggle/dsv/2645581
title: Dutch News Articles
DOI: 10.5281/zenodo.5526292
title: dictionaria/daakaka: Daakaka Dictionary

description: von Prince, Kilu. 2017. Daakaka dictionary. Dictionaria 1. 1-2167 (Available online at https://dictionaria.clld.org/contributions/daakaka)
DOI: 10.5281/zenodo.3067380
title: dictionaria/daakaka: Daakaka Dictionary

description: von Prince, Kilu. 2017. Daakaka dictionary. Dictionaria 1. 1-2167 (Available online at https://dictionaria.clld.org/contributions/daakaka)
DOI: 10.5281/zenodo.5526289
title: Spine-project/spine-cs-a1:

description: Irish dispatch study with power flows
DOI: 10.5281/zenodo.5526288
title: Spine-project/spine-cs-a1:

description: Irish dispatch study with power flows
DOI: 10.6084/m9.figshare.16660762
title: ICP raw data.zip

description: ABCD
DOI: 10.6084/m9.figshare.16660762.v5
title: ICP raw data.zip

description: ABCD
DOI: 10.6084/m9.figshare.16660762.v4
title: ICP raw data.zip

description: ABCD
DOI: 10.5281/zenodo.5526291
title: Spine-project/spine-cs-c3:

description: Integrated energy system planning with high operational detail
DOI: 10.25646/9088
title: Tagesdaten-CSV aus dem DIVI-Intensivregister

description: Die Tagesdaten-CSV entspricht einem Auszug der Daten des DIVI-Intensivregisters. Die Datei enthält eine Aggregation der aktuellsten Meldungen pro Landkreis. Es werden die aktuell gemeldeten Anzahlen der COVID-19 Intensivfälle sowie die gemeldeten intensivmedizinischen Behandlungskapazitäten angezeigt. Die Tagesdaten-CSV liefert dabei ausschließlich einen Blick auf die Daten gemäß dem Stand des betrachteten Tages. Die Daten sind im situationsbedingten Kontext aufbereitet, damit sind verschiedene Tagesdaten-CSVs u.U. nicht direkt miteinander vergleichbar. Die aktuellsten Meldungen werden im gewählten Betrachtungszeitfenster über alle Meldebereiche und Standorte aufsummiert. Weitere Informationen sind zu finden unter https://www.intensivregister.de/#/faq
DOI: 10.5281/zenodo.3340717
title: dictionaria/guarayu: Guarayu. A revised dictionary by Alfred Hoeller

description: Danielsen, Swintha and Sell, Lena and Terhart, Lena. 2019. Guarayu. A revised dictionary by Alfred Hoeller. Dictionaria 7. 1-3590 (Available online at https://dictionaria.clld.org/contributions/guarayu)
DOI: 10.25345/c59g2w
title: MassIVE MSV000088151 - Supplementary raw metabolomics files for "Ecological stochasticity and phage induction diversify bacterioplankton communities at the microscale"
title: Supplementary raw metabolomics files for "Ecological stochasticity and phage induction diversify bacterioplankton communities at the microscale," Rachel E. Szabo et al.
DOI: 10.5281/zenodo.5526333
title: dictionaria/hdi: Hdi Dictionary

description: Frajzyngier, Zygmunt and Eguchi, Paul and Prafé, Roger and Schwabauer, Megan (with Erin Shay, Henry Tourneux). 2017. Hdi dictionary. Dictionaria 2. 1-1681. DOI: 10.5281/zenodo.3067648 (Available online at https://dictionaria.clld.org/contributions/hdi)
DOI: 10.5281/zenodo.3067648
title: dictionaria/hdi: Hdi Dictionary

description: Frajzyngier, Zygmunt and Eguchi, Paul and Prafé, Roger and Schwabauer, Megan (with Erin Shay, Henry Tourneux). 2017. Hdi dictionary. Dictionaria 2. 1-1681. DOI: 10.5281/zenodo.3067648 (Available online at https://dictionaria.clld.org/contributions/hdi)
DOI: 10.5281/zenodo.5526241
title: Rye microgrid historical weather forecasts and stochastic scenarios

description: This datasets connects historical weather forecasts from the Norwegian Meteorological Institute (met.no) and historical observations from Rye microgrid (https://doi.org/10.5281/zenodo.4448894). Each csv file represents a historical weather forecast for approximately 60 hours ahead. Each csv-file also contains the corresponding observations in the same time interval. Finally, the files also contain load, wind generation and solar PV generation predicitons. The predictions are generated using gradient boosting. The predictions ending with "_ls" are based on least square. The predictions ending with "_quantile_i" represent a quantile prediction. For example, "wind_quantile_2" means that there is a 20% probability the wind will be less than this value. The gradient boosting predictor has been trained to predict the wind power, solar power and load using the explanatory variables below: Solar PV: Cloud area fraction, initial production, clear sky production and forecast look-ahead time Wind power: wind speed, wind direction, wind power converted from wind speed forecast, initial production and forecast look-ahead time Load: hour of day, month of year
DOI: 10.5281/zenodo.5526240
title: Rye microgrid historical weather forecasts and stochastic scenarios

description: This datasets connects historical weather forecasts from the Norwegian Meteorological Institute (met.no) and historical observations from Rye microgrid (https://doi.org/10.5281/zenodo.4448894). Each csv file represents a historical weather forecast for approximately 60 hours ahead. Each csv-file also contains the corresponding observations in the same time interval. Finally, the files also contain load, wind generation and solar PV generation predicitons. The predictions are generated using gradient boosting. The predictions ending with "_ls" are based on least square. The predictions ending with "_quantile_i" represent a quantile prediction. For example, "wind_quantile_2" means that there is a 20% probability the wind will be less than this value. The gradient boosting predictor has been trained to predict the wind power, solar power and load using the explanatory variables below: Solar PV: Cloud area fraction, initial production, clear sky production and forecast look-ahead time Wind power: wind speed, wind direction, wind power converted from wind speed forecast, initial production and forecast look-ahead time Load: hour of day, month of year
DOI: 10.5281/zenodo.5525936
title: The impact of the cross-docked poses on the performance of machine learning classifier for protein-ligand binding pose prediction

description: Datasets, features, and some representative scripts utilized in the paper "The impact of the cross-docked poses on the performance of machine learning classifier for protein-ligand binding pose prediction".
DOI: 10.5281/zenodo.4715731
title: The impact of the cross-docked poses on the performance of machine learning classifier for protein-ligand binding pose prediction

description: Datasets, features, and some representative scripts utilized in the paper "The impact of the cross-docked poses on the performance of machine learning classifier for protein-ligand binding pose prediction".
DOI: 10.6084/m9.figshare.16676824.v1
title: test data

description: A dataset with annotation of transcripts
DOI: 10.5281/zenodo.5526353
title: dictionaria/iquito: Iquito dictionary

description: Michael, Lev and Beier, Christine. 2021. Iquito dictionary. Dictionaria 14. 1-4128. (Available online at https://dictionaria.clld.org/contributions/iquito, Accessed on 2021-09-24.)
DOI: 10.5281/zenodo.4676275
title: dictionaria/iquito: Iquito dictionary

description: Michael, Lev and Beier, Christine. 2021. Iquito dictionary. Dictionaria 14. 1-4128. (Available online at https://dictionaria.clld.org/contributions/iquito, Accessed on 2021-09-24.)
DOI: 10.6084/m9.figshare.16676824
title: test data

description: A dataset with annotation of transcripts
DOI: 10.6084/m9.figshare.16676824.v3
title: test data

description: A dataset with annotation of transcripts
DOI: 10.6084/m9.figshare.16676824.v2
title: test data

description: A dataset with annotation of transcripts
DOI: 10.5281/zenodo.5526208
title: dataset related to article "Dynamic expression of NR2F1 and SOX2 in developing and adult human cortex: comparison with cortical malformations"

description: Main data of the human brain material; Table of the cases, Row data of the immunohistochemical quantifications
description: study supported by european commission and Italian Ministry of Health - (ERA-NET) Neuron II (Improv-Vision) RE7-No. 363/2016
DOI: 10.5281/zenodo.5526207
title: dataset related to article "Dynamic expression of NR2F1 and SOX2 in developing and adult human cortex: comparison with cortical malformations"

description: Main data of the human brain material; Table of the cases, Row data of the immunohistochemical quantifications
description: study supported by european commission and Italian Ministry of Health - (ERA-NET) Neuron II (Improv-Vision) RE7-No. 363/2016
DOI: 10.6084/m9.figshare.16660486
title: Indices of the MD17 sub-samples

description: This data collection contains all the indices used to build the training data (for each repeat of the learning curves) selected as random sub-samples of the MD17 datasets. It also includes the equilibrium geometries used to build the RE descriptor of KREG model.
DOI: 10.6084/m9.figshare.16660486.v3
title: Indices of the MD17 sub-samples

description: This data collection contains all the indices used to build the training data (for each repeat of the learning curves) selected as random sub-samples of the MD17 datasets. It also includes the equilibrium geometries used to build the RE descriptor of KREG model.
DOI: 10.6084/m9.figshare.16660486.v2
title: Indices of the MD17 sub-samples

description: This data collection contains the indices used to build the training data from sub-samples of the MD17 datasets. It also includes the equilibrium geometries used to build the RE descriptor of KREG model.
DOI: 10.6084/m9.figshare.16676845
title: trainpol.zip

description: Training-validation dataset as part of article "Effect of the synergetic use of Sentinel-1, Sentinel-2, LiDAR and derived data in Land Cover Classification of a Semiarid Mediterranean Area", subbmited to the journal International Journal of Geographical Information Science
DOI: 10.6084/m9.figshare.16676845.v1
title: trainpol.zip

description: Training-validation dataset as part of article "Effect of the synergetic use of Sentinel-1, Sentinel-2, LiDAR and derived data in Land Cover Classification of a Semiarid Mediterranean Area", subbmited to the journal International Journal of Geographical Information Science
DOI: 10.5517/ccdc.csd.cc1ky7f5
title: CCDC 1458067: Experimental Crystal Structure Determination

description: Related Article: Cui-ling Lan, Zhi-rong Luo, Yuan-cheng Li|2017|Huaxue shijie|58|27|
DOI: 10.5517/ccdc.csd.cc2874rf
title: CCDC 2092244: Experimental Crystal Structure Determination

description: Related Article: Zi Lang Goo, Katsue Minami, Nobuto Yoshinari, Takumi Konno|2021|Chem.Asian J.|16|2641|doi:10.1002/asia.202100706
DOI: 10.5517/ccdc.csd.cc2874sg
title: CCDC 2092245: Experimental Crystal Structure Determination

description: Related Article: Zi Lang Goo, Katsue Minami, Nobuto Yoshinari, Takumi Konno|2021|Chem.Asian J.|16|2641|doi:10.1002/asia.202100706
DOI: 10.5517/ccdc.csd.cc2874th
title: CCDC 2092246: Experimental Crystal Structure Determination

description: Related Article: Zi Lang Goo, Katsue Minami, Nobuto Yoshinari, Takumi Konno|2021|Chem.Asian J.|16|2641|doi:10.1002/asia.202100706
DOI: 10.5281/zenodo.5526447
title: dictionaria/medialengua: Media Lengua dictionary

description: Visser, Eline. 2020. Kalamang dictionary. Dictionaria 13. 1-2737 (Available online at http://dictionaria.clld.org/contributions/kalamang)
DOI: 10.5281/zenodo.4147098
title: dictionaria/medialengua: Media Lengua dictionary

description: Visser, Eline. 2020. Kalamang dictionary. Dictionaria 13. 1-2737 (Available online at http://dictionaria.clld.org/contributions/kalamang)
DOI: 10.5281/zenodo.5526419
title: dictionaria/kalamang: Kalamang dictionary

description: Visser, Eline. 2020. Kalamang dictionary. Dictionaria 13. 1-2737 (Available online at http://dictionaria.clld.org/contributions/kalamang)
DOI: 10.5281/zenodo.4297473
title: dictionaria/kalamang: Kalamang dictionary

description: Visser, Eline. 2020. Kalamang dictionary. Dictionaria 13. 1-2737 (Available online at http://dictionaria.clld.org/contributions/kalamang)
DOI: 10.34740/kaggle/dsv/2645818
title: 2021 World Population (updated daily)
DOI: 10.6084/m9.figshare.16676872
title: Usability, acceptability, and self-reported impact of an innovative hepatitis C risk reduction intervention for men have sex with men

description: To evaluate the acceptability, usability and self-reported impact of an hepatitis C prevention intervention we sent an online questionnaire to users of the intervention. The intervention is the NoMoreC toolbox, a box with products to assist in HCV risk reduction behaviours. The responses to the questionnaire are found in the data set.
DOI: 10.5281/zenodo.3345804
title: dictionaria/nen: Nen Dictionary

description: Evans, Nicholas. 2019. Nen dictionary. Dictionaria 8. 1-5005 (Available online at https://dictionaria.clld.org/contributions/nen)
DOI: 10.5281/zenodo.3066951
title: dictionaria/palula: Palula dictionary

description: Liljegren, Henrik. 2019. Palula dictionary. Dictionaria 3. 1-2700 (Available online at https://dictionaria.clld.org/contributions/palula)
DOI: 10.34740/kaggle/dsv/2645839
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5281/zenodo.5526324
title: Benchmark dataset for preprint: "EDEN: A high-performance, general-purpose, NeuroML-based neural simulator"

description: The benchmark files and scripts to reproduce the figures of the preprint "EDEN: A high-performance, general-purpose, NeuroML-based neural simulator" ( https://arxiv.org/abs/2106.06752 ) The benchmarks require a computer running Linux with Docker installed. Unpack the paper_experiments.zip file and follow the instructions in the README.md file to run the benchmarks and reproduce the figures.
DOI: 10.15468/5fhvbj
title: A New Lionfish of the Genus Dendrochirus (Scorpaenidae: Pteroinae) from the Tuamotu Archipelago, South Pacific Ocean

description: This dataset contains the digitized treatments in Plazi based on the original journal article Matsunuma, Mizuki, Motomura, Hiroyuki (2013): A New Lionfish of the Genus Dendrochirus (Scorpaenidae: Pteroinae) from the Tuamotu Archipelago, South Pacific Ocean. Species Diversity 18 (1): 1-7, DOI: 10.12782/sd.18.1.001, URL: http://dx.doi.org/10.12782/sd.18.1.001
DOI: 10.5281/zenodo.5526498
title: MyLake Application for Lake 227

description: Code and data for the application of the MyLake model to Lake 227. Accompanies the paper: Warming combined with experimental eutrophication intensifies lake phytoplankton blooms
DOI: 10.5281/zenodo.5526497
title: MyLake Application for Lake 227

description: Code and data for the application of the MyLake model to Lake 227. Accompanies the paper: Warming combined with experimental eutrophication intensifies lake phytoplankton blooms
DOI: 10.5281/zenodo.5526509
title: dictionaria/sanzhi: Sanzhi Dargwa dictionary

description: Forker, Diana. 2019. Sanzhi Dargwa dictionary. Dictionaria 5. 1-5533. (Available online at https://dictionaria.clld.org/contributions/sanzhi, Accessed on 2021-02-08.)
DOI: 10.5281/zenodo.3257633
title: dictionaria/sanzhi: Sanzhi Dargwa dictionary

description: Forker, Diana. 2019. Sanzhi Dargwa dictionary. Dictionaria 5. 1-5533. (Available online at https://dictionaria.clld.org/contributions/sanzhi, Accessed on 2021-02-08.)
DOI: 10.5281/zenodo.5526518
title: dictionaria/sidaama: Sidaama dictionary

description: Yri, Kjell Magne and Pepper, Steve. 2019. Sidaama dictionary. Dictionaria 6. 1-3578 (Available online at https://dictionaria.clld.org/contributions/sidaama)
DOI: 10.5281/zenodo.3338362
title: dictionaria/sidaama: Sidaama dictionary

description: Yri, Kjell Magne and Pepper, Steve. 2019. Sidaama dictionary. Dictionaria 6. 1-3578 (Available online at https://dictionaria.clld.org/contributions/sidaama)
DOI: 10.5281/zenodo.5526528
title: dictionaria/teop: A multifunctional Teop-English dictionary

description: Mosel, Ulrike. 2019. A multifunctional Teop-English dictionary. Dictionaria 4. 1-6488. (Available online at https://dictionaria.clld.org/contributions/teop, Accessed on 2021-02-08.)
DOI: 10.5281/zenodo.3257579
title: dictionaria/teop: A multifunctional Teop-English dictionary

description: Mosel, Ulrike. 2019. A multifunctional Teop-English dictionary. Dictionaria 4. 1-6488. (Available online at https://dictionaria.clld.org/contributions/teop, Accessed on 2021-02-08.)
DOI: 10.25838/d5p-28
title: Reducing sources of variance in experimental procedures in in vitro research

description: In this project, we statistically evaluated repetitive data of a very basic, in academic and industry lab most widely applied lab procedure, namely quantifying number of viable cells, to appreciate the impact of different parameters and instrumentations that may apply during this procedure as sources of variance. Moreover, by comparing the variations of data acquired under two different procedures featuring improved stringency of protocol adherence, our project attempts to propose guidelines how to reduce variations.
DOI: 10.15468/c6k3zj
title: Validity of Platycephalus grandispinis Cuvier, 1829, with Priority over Platycephalus longispinis Macleay, 1884 (Actinopterygii: Scorpaeniformes: Platycephalidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Imamura, Hisashi (2013): Validity of Platycephalus grandispinis Cuvier, 1829, with Priority over Platycephalus longispinis Macleay, 1884 (Actinopterygii: Scorpaeniformes: Platycephalidae). Species Diversity 18 (2): 183-192, DOI: 10.12782/sd.18.2.183, URL: http://dx.doi.org/10.12782/sd.18.2.183
DOI: 10.6084/m9.figshare.16677091
title: Analysis of open reviews from MDPI journals

description: Journal-level data, code and regression outputs for an analysis of open reviews from Mdpi jouranls.
DOI: 10.5281/zenodo.5526550
title: dictionaria/tseltal: Tseltal-Spanish multidialectal dictionary

description: Polian, Gilles. 2020. Tseltal-Spanish multidialectal dictionary. Dictionaria 10. 1-8109 (Available online at https://dictionaria.clld.org/contributions/tseltal)
DOI: 10.5281/zenodo.3660890
title: dictionaria/tseltal: Tseltal-Spanish multidialectal dictionary

description: Polian, Gilles. 2020. Tseltal-Spanish multidialectal dictionary. Dictionaria 10. 1-8109 (Available online at https://dictionaria.clld.org/contributions/tseltal)