cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.10302830
title: MOESM3 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 3: Table S3. Overview of the number of raw reads per library and the final number of reads after trimming, cleaning and contamination checks.
DOI: 10.6084/m9.figshare.10302833
title: MOESM4 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 4: Table S4. Trinotate annotation report.
DOI: 10.6084/m9.figshare.10302830.v1
title: MOESM3 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 3: Table S3. Overview of the number of raw reads per library and the final number of reads after trimming, cleaning and contamination checks.
DOI: 10.6084/m9.figshare.10302821
title: MOESM5 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 5: Figure S5. SDS-PAGE analysis of over-expression and purification of RepR(6His) and RepR’(6His) (rtf with Figure S5 in jpg format).
DOI: 10.6084/m9.figshare.10302824
title: MOESM2 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 2: Table S2. Overview feeding assay statistics.
DOI: 10.6084/m9.figshare.10302833.v1
title: MOESM4 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 4: Table S4. Trinotate annotation report.
DOI: 10.6084/m9.figshare.10302815
title: MOESM1 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 1: Table S1. Overview of the results of the feeding assays.
DOI: 10.6084/m9.figshare.10302821.v1
title: MOESM5 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 5: Figure S5. SDS-PAGE analysis of over-expression and purification of RepR(6His) and RepR’(6His) (rtf with Figure S5 in jpg format).
DOI: 10.6084/m9.figshare.10302824.v1
title: MOESM2 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 2: Table S2. Overview feeding assay statistics.
DOI: 10.6084/m9.figshare.10302815.v1
title: MOESM1 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 1: Table S1. Overview of the results of the feeding assays.
DOI: 10.6084/m9.figshare.10302809
title: MOESM4 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 4: Table S3. Oligonucleotides used in this study (rtf).
DOI: 10.6084/m9.figshare.10302803
title: MOESM3 of Analysis of official deceased organ donation data casts doubt on the credibility of Chinaâ€™s organ transplant reform

description: Additional file 3. Provincial Red Cross data.
DOI: 10.6084/m9.figshare.10302803.v1
title: MOESM3 of Analysis of official deceased organ donation data casts doubt on the credibility of Chinaâ€™s organ transplant reform

description: Additional file 3. Provincial Red Cross data.
DOI: 10.6084/m9.figshare.10302791
title: MOESM10 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 10: Table S10. CPM, TMM cross-sample normalised and filtered count matrix only including DE genes.
DOI: 10.6084/m9.figshare.10302809.v1
title: MOESM4 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 4: Table S3. Oligonucleotides used in this study (rtf).
DOI: 10.6084/m9.figshare.10302794
title: MOESM2 of Analysis of official deceased organ donation data casts doubt on the credibility of Chinaâ€™s organ transplant reform

description: Additional file 2. Central Red Cross data.
DOI: 10.6084/m9.figshare.10302797
title: MOESM3 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 3: Table S2. Bacterial strains, plasmids and genetic cassettes used in this study (rtf).
DOI: 10.6084/m9.figshare.10302788
title: MOESM2 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 2: Table S1. Determination of pRK-1 plasmid copy number (PCN) in E. coli DH5α strain. Plasmid copy number was defined for three independent clones (1–3). For each of DNA isolate three QPCR reactions were performer (the table contains average values). Figure S2. Raw data from construction of standard curves and QPCR of total DNA preparates from E. coli DH5α clones harboring pRK-1. DNA isolated using QIAamp DNA Mini Kit (Qiagen). Figure S3. Raw data from construction of standard curves and QPCR of total DNA preparates from E. coli DH5α clones harboring pRK-1. DNA isolated by thermal lysis. Cells were suspended in water, boiled and centrifuged (supernatant used as a template). Figure S4. Raw data from construction of standard curves and QPCR of total DNA preparates from E. coli DH5α clones harboring pRK-1. Washed cells added directly to the PCR reaction.
DOI: 10.6084/m9.figshare.10302791.v1
title: MOESM10 of An influential meal: host plant dependent transcriptional variation in the beet armyworm, Spodoptera exigua (Lepidoptera: Noctuidae)

description: Additional file 10: Table S10. CPM, TMM cross-sample normalised and filtered count matrix only including DE genes.
DOI: 10.6084/m9.figshare.10302794.v1
title: MOESM2 of Analysis of official deceased organ donation data casts doubt on the credibility of Chinaâ€™s organ transplant reform

description: Additional file 2. Central Red Cross data.
DOI: 10.6084/m9.figshare.10302782
title: MOESM1 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 1: Figure S1. Mutational analysis of the pIGRK REP module. Contains a detailed description of mutational analysis performed, the results obtained and a schematic representation of the constructed plasmids. (rtf with Figure S1 in jpg format).
DOI: 10.6084/m9.figshare.10302788.v1
title: MOESM2 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 2: Table S1. Determination of pRK-1 plasmid copy number (PCN) in E. coli DH5α strain. Plasmid copy number was defined for three independent clones (1–3). For each of DNA isolate three QPCR reactions were performer (the table contains average values). Figure S2. Raw data from construction of standard curves and QPCR of total DNA preparates from E. coli DH5α clones harboring pRK-1. DNA isolated using QIAamp DNA Mini Kit (Qiagen). Figure S3. Raw data from construction of standard curves and QPCR of total DNA preparates from E. coli DH5α clones harboring pRK-1. DNA isolated by thermal lysis. Cells were suspended in water, boiled and centrifuged (supernatant used as a template). Figure S4. Raw data from construction of standard curves and QPCR of total DNA preparates from E. coli DH5α clones harboring pRK-1. Washed cells added directly to the PCR reaction.
DOI: 10.6084/m9.figshare.10302797.v1
title: MOESM3 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 3: Table S2. Bacterial strains, plasmids and genetic cassettes used in this study (rtf).
DOI: 10.6084/m9.figshare.10302770
title: MOESM1 of Age group differences in association between IADL decline and depressive symptoms in community-dwelling elderly

description: Additional file 1: Table S1. Adjusted Odds Ratios (95%CI) of Depressive symptoms for each baseline characteristic stratified by age groups (70s and 80s) and depressive status.
DOI: 10.6084/m9.figshare.10302782.v1
title: MOESM1 of Molecular dissection of the replication system of plasmid pIGRK encoding two in-frame Rep proteins with antagonistic functions

description: Additional file 1: Figure S1. Mutational analysis of the pIGRK REP module. Contains a detailed description of mutational analysis performed, the results obtained and a schematic representation of the constructed plasmids. (rtf with Figure S1 in jpg format).
DOI: 10.6084/m9.figshare.10302770.v1
title: MOESM1 of Age group differences in association between IADL decline and depressive symptoms in community-dwelling elderly

description: Additional file 1: Table S1. Adjusted Odds Ratios (95%CI) of Depressive symptoms for each baseline characteristic stratified by age groups (70s and 80s) and depressive status.
DOI: 10.6084/m9.figshare.10302728
title: MOESM6 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 6: Table S6. List of nearest genes to differential ATAC-seq peaks at each stage of differentiation.
DOI: 10.6084/m9.figshare.10302734
title: MOESM7 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 7: Table S7. Motifs enriched in nearest differential peaks associated with E2F target genes.
DOI: 10.6084/m9.figshare.10302728.v1
title: MOESM6 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 6: Table S6. List of nearest genes to differential ATAC-seq peaks at each stage of differentiation.
DOI: 10.6084/m9.figshare.10302734.v1
title: MOESM7 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 7: Table S7. Motifs enriched in nearest differential peaks associated with E2F target genes.
DOI: 10.6084/m9.figshare.10302716
title: MOESM5 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 5: Table S5. Motifs identified at differential ATAC-seq peaks during differentiation.
DOI: 10.6084/m9.figshare.10302716.v1
title: MOESM5 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 5: Table S5. Motifs identified at differential ATAC-seq peaks during differentiation.
DOI: 10.6084/m9.figshare.10302707
title: MOESM4 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 4: Table S4. Summary of ATAC-seq data.
DOI: 10.6084/m9.figshare.10302698
title: MOESM3 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 3: Table S3. 36 genes differentially expressed at every stage of HD astrocyte differentiation.
DOI: 10.6084/m9.figshare.10302707.v1
title: MOESM4 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 4: Table S4. Summary of ATAC-seq data.
DOI: 10.6084/m9.figshare.10302689
title: MOESM2 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 2: Table S2. Differentially expressed genes across HD astrocyte differentiations.
DOI: 10.6084/m9.figshare.10302698.v1
title: MOESM3 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 3: Table S3. 36 genes differentially expressed at every stage of HD astrocyte differentiation.
DOI: 10.6084/m9.figshare.10302689.v1
title: MOESM2 of Chromatin accessibility and transcription dynamics during in vitro astrocyte differentiation of Huntingtonâ€™s Disease Monkey pluripotent stem cells

description: Additional file 2: Table S2. Differentially expressed genes across HD astrocyte differentiations.
DOI: 10.6084/m9.figshare.10302602
title: Supplemental_Cfixation_POC_data

description: C14 incorporation and POC measurements used in Figure S1.
DOI: 10.6084/m9.figshare.10302494
title: NB_historic_temp_database

description: Temperature data used for Figure S5. Can also be downloaded from https://web.uri.edu/gso/research/plankton/data/<br><br>
DOI: 10.6084/m9.figshare.10302494.v1
title: NB_historic_temp_database

description: Temperature data used for Figure S5. Can also be downloaded from https://web.uri.edu/gso/research/plankton/data/<br><br>
DOI: 10.6084/m9.figshare.10302560
title: invivo_growth_data

description: Raw fluorescence data used to generate growth rates and thermal performance curves in this study.
DOI: 10.6084/m9.figshare.10302425
title: Genomes from polar regions

description: 214 genome bins from seawater metagenomes of polar regions
DOI: 10.6084/m9.figshare.10302602.v1
title: Supplemental_Cfixation_POC_data

description: C14 incorporation and POC measurements used in Figure S1.
DOI: 10.6084/m9.figshare.10302560.v1
title: invivo_growth_data

description: Raw fluorescence data used to generate growth rates and thermal performance curves in this study.
DOI: 10.6084/m9.figshare.10302425.v1
title: Genomes from polar regions

description: 214 genome bins from seawater metagenomes of polar regions
DOI: 10.6084/m9.figshare.10302227
title: autoantibody discovery

description: Source data for the figures of the article
DOI: 10.6084/m9.figshare.10302212
title: RAW DATA.xlsx

description: This is a raw dataset for the paper entitled "Carbogen gas-challenge BOLD fMRI in assessment of liver hypoxia after portal microcapsules implantation", which was accepted by PLOS ONE. The dataset contains the raw data of the deltaR2* value in the four treatments (PV1, PV2, PV3 and Sham) at different timepoint (DAY1, DAY2, DAY3 and DAY7). <br>
DOI: 10.26180/5dcccac222d76
title: Fuzzy Clustering of Interval Time Series

description: Simulation Data setsSet 1 : cSet 2: dSet 3: gSet 4 : i
DOI: 10.6084/m9.figshare.10302053
title: Original Site Frequency Spectrum (SFS) files for demographic analyses

description: The site frequency spectrum before correction for categories at low minor allele frequencies.<br>Adelie = Adelie penguin, <i>Pygoscelis adeliae</i>Eastern_rockhopper = eastern rockhopper penguin, <i>Eudyptes filholi</i>Fiordland_crested - Fiordland crested penguin, <i>Eudyptes pachyrhynchus</i>Chinstrap = Chinstrap penguin, <i>Pygoscelis antarctica</i>Emperor = Emperor penguin, <i>Aptenodytes forsteri</i>Gentoo = Gentoo penguin, <i>Pygoscelis papua</i>King = King penguin, <i>Aptenodytes patagonicus</i>Northern_rockhopper = Northern rockhopper penguin, <i>Eudyptes moseleyi</i>Macaroni_royal = Macaroni penguin and Royal penguin, <i>Eudyptes chrysolophus chrysolophus</i> and <i>Eudyptes chrysolophus schlegeli</i>Western_rockhopper = Western rockhopper penguin, <i>Eudyptes chrysocome</i>
DOI: 10.6084/m9.figshare.10301984
title: Central Asian Orogenic Belt Granitoids Geochemistry Dataset

description: The dataset includes Table S1 to S7 of the granitoids from the Central Asian Orogenic Belt.
DOI: 10.6084/m9.figshare.10301822
title: Patch and landscape scale movements of Cactus bugs

description: immigration rates for cactus bugs across landscapes with values for estimated connectivity
DOI: 10.6084/m9.figshare.10301852
title: landscape movements of cactus bugs

description: movements of cactus bugs across replicate landscapes and connectivity values for each landscape
DOI: 10.6084/m9.figshare.10301933
title: Sex ratio&reproduction data of Red devil cichlid (A. labiatus) of Lake Sentani, Indonesia_2019.xlsx

description: It has been hypothesized that the <i>Amphilophus labiatus</i> has impacted native fish populations, so research was undertaken to describe the sex ratio and reproductive potential of <i>A. labiatus</i> in Lake Sentani through the determination of gonad maturation stages, gonadosomatic index and fecundity. The research was conducted in Lake Sentani between June and August 2019. Fish were collected using a floating gill nets at each location. Sex identification, gonads type, gonad weight and fish fecundity were observed in laboratory. Of the total 542 of <i>A. labiatus </i>collected during the survey, 345 individuals were observed for sex ratio and reproduction. The overall male : female ratio skewed toward male, 3.28 : 1. Generally, males were found in gonad maturation stage I, while females were commonly found in gonad maturation stages III and IV at all locations during the study period. The highest male GSI mean was in Yakonde (0.240.21) and for female was in Ayapo (1.111.01). The fish fecundity was 191 – 2.720 eggs. The fish has spread to most parts of the lake and can potentially spawn at any location,thus providing an explanation for the observation that the <i>A. labiatus</i> population has been sharply increasing in last 10 years in Lake Sentani.
DOI: 10.6084/m9.figshare.10301933.v1
title: Sex ratio&reproduction data of Red devil cichlid (A. labiatus) of Lake Sentani, Indonesia_2019.xlsx

description: It has been hypothesized that the <i>Amphilophus labiatus</i> has impacted native fish populations, so research was undertaken to describe the sex ratio and reproductive potential of <i>A. labiatus</i> in Lake Sentani through the determination of gonad maturation stages, gonadosomatic index and fecundity. The research was conducted in Lake Sentani between June and August 2019. Fish were collected using a floating gill nets at each location. Sex identification, gonads type, gonad weight and fish fecundity were observed in laboratory. Of the total 542 of <i>A. labiatus </i>collected during the survey, 345 individuals were observed for sex ratio and reproduction. The overall male : female ratio skewed toward male, 3.28 : 1. Generally, males were found in gonad maturation stage I, while females were commonly found in gonad maturation stages III and IV at all locations during the study period. The highest male GSI mean was in Yakonde (0.240.21) and for female was in Ayapo (1.111.01). The fish fecundity was 191 – 2.720 eggs. The fish has spread to most parts of the lake and can potentially spawn at any location,thus providing an explanation for the observation that the <i>A. labiatus</i> population has been sharply increasing in last 10 years in Lake Sentani.
DOI: 10.6084/m9.figshare.10301852.v2
title: movements_landscape_bysurvey_withmetrics 2019_02_28

description: movements of cactus bugs across replicate landscapes and connectivity values for each landscape
DOI: 10.6084/m9.figshare.10301984.v1
title: Central Asian Orogenic Belt Granitoids Geochemistry Dataset

description: The dataset includes Table S1 to S7 of the granitoids from the Central Asian Orogenic Belt.
DOI: 10.6084/m9.figshare.10301852.v1
title: Untitled Item

description: movements of cactus bugs across replicate landscapes and connectivity values for each landscape
DOI: 10.6084/m9.figshare.10301984.v3
title: Central Asian Orogenic Belt Granitoids Geochemistry Dataset

description: The dataset includes Table S1 to S7 of the granitoids from the Central Asian Orogenic Belt.
DOI: 10.6084/m9.figshare.10301984.v2
title: Central Asian Orogenic Belt Granitoids Geochemistry Dataset

description: The dataset includes Table S1 to S7 of the granitoids from the Central Asian Orogenic Belt.
DOI: 10.6084/m9.figshare.10301681
title: R processing and analysis code

description: This script goes along with the work presented in the following paper:<br>Genomic and phenotypic characterization of Burkholderia isolates from the potable water system of the International Space Station<br>Aubrie O’Rourke1¶, Michael D. Lee2,3¶, William C. Nierman1, R. Craig Everroad2, Chris L. Dupont1<br>Author affiliations:1: J. Craig Venter Institute, San Diego, CA USA2: Exobiology Branch, NASA Ames Research Center, Mountain View, CA, USA3: Blue Marble Space Institute of Science, Seattle, WA, USA<br># ¶ These authors contributed equally to this work.
DOI: 10.25377/sussex.10301663
title: Interview with Mandy, 20 - 21, White British, lower middle class, Roman Catholic. Women Risk and AIDS Project, Manchester, 1989. Original version (Ref: MAN99)

description: This interview is part of the Women, Risk and Aids Project (1989-90) archive which was created as part of the Reanimating Data project (2018-20).<br>Interview with Mandy, a university student in Manchester, talking about her sexual relationships and experiences past and present. Mandy went to a 'posh' boarding school in Northern England after her family relationships broke down. This was a sexist boys school that took girls at 6th form.<br>She also talks about her experiences at a 'rough' catholic comprehensive school in Wales, including experiences of Catholic sex education which included anti-abortion and anti-contraception education. Her attempts to challenge this were understood as being disruptive. Mandy has an Irish Catholic family and says that her mum wanted to be 'liberal' about sex but that it didn't come naturally. Mandy struggled to talk to her about sex and later sought her own information about sex and AIDS from friends, books and the Terrance Higgins Trust. Mandy is concerned about her own exposure to HIV as previous partners have slept with lots of 'sleazy' people and been caught up in relationship triangles. Mandy talks about previous relationships as a teenager in Wales and as a young woman in Manchester. This includes one partner that she lived with and with whom she tried to negotiate non-penetrative 'safe sex'. Mandy talks about the challenges of having safe sex within the heterosexual community.
DOI: 10.6084/m9.figshare.10301678
title: Modeling results for growth models - vBGF and Gompertz

description: RDS (R) file with results of mixed-effects growth models for the von Bertalanffy and Gompertz growth functions.