cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pt88vw
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Buxus sempervirens L.",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186778-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83k3r7
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepanthes johnsonii Ames"
 ]
}

 The dataset includes 20 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006751-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjm97u
title: Occurrence Download

description: A dataset containing 180567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2022-11-14",
 "EventDate is less than or equal to 2022-12-14",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 180567 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0206130-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.crc3ax
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Geometry POLYGON((-8.42971 39.3219,27.42971 39.3219,27.42971 53.6781,-8.42971 53.6781,-8.42971 39.3219))",
 "Geometry POLYGON((8.94115 38.12141,11.73539 38.12141,11.73539 46.77612,8.94115 46.77612,8.94115 38.12141))",
 "Geometry POLYGON((5.00729 34.89042,14.67071 34.89042,14.67071 49.75606,5.00729 49.75606,5.00729 34.89042))"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Anthidium lituratum (Panzer, 1801)"
 ]
}

 The dataset includes 20 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0275224-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ddvkk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Antiaris toxicaria (Pers.) Lesch.",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0206176-220831081235567/datasets/export for details.
DOI: 10.15468/dl.uzjgh4
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhamnus yoshinoi Makino",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 36 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0206184-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3943t2
title: Occurrence Download

description: A dataset containing 84730 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is India Biodiversity Portal publication grade dataset"
 ]
}

 The dataset includes 84730 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0275274-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.savnyt
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Felicia petiolata (Harv.) N.E.Br."
 ]
}

 The dataset includes 69 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0209618-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.77ur4z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Peperomia metallica L.Linden & Rodigas",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0206144-220831081235567/datasets/export for details.
DOI: 10.15468/dl.dykfnt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zehneria indica (Lour.) Keraudren",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202065-220831081235567/datasets/export for details.
DOI: 10.15468/dl.qc8ehz
title: Occurrence Download

description: A dataset containing 159645 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cervus Linnaeus, 1758"
 ]
}

 The dataset includes 159645 records from 606 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186779-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pscpky
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mabuya nigropunctata Spix, 1825",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 216 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003826-150831095807960/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xaw5xt
title: Occurrence Download

description: A dataset containing 242 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Biodiversidad íctica de Providencia durante la Expedición Seaflower 2019 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 242 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041159-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.21ktyh
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aeonium percarneum (R.P.Murray) Pit. & Proust"
 ]
}

 The dataset includes 124 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003826-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w646mb
title: Occurrence Download

description: A dataset containing 14552 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Psilotaceae"
 ]
}

 The dataset includes 14552 records from 403 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048017-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rw53pc
title: Occurrence Download

description: A dataset containing 193285 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Perca fluviatilis sp. gracilis Pokrovsky, 1951"
 ]
}

 The dataset includes 193285 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003826-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pq66x5
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Draba exunguiculata (O.E.Schulz) C.L.Hitchc.)"
 ]
}

 The dataset includes 105 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009417-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qfxbmc
title: Occurrence Download

description: A dataset containing 202 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heuchera grossulariifolia Rydb."
 ]
}

 The dataset includes 202 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003826-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xwge5h
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "PublishingOrg is one of (c8d737e0-2ff8-42e8-b8fc-6b805d26fc5f, ada19a05-4216-44c7-aa4f-6e7177bcb0ac)",
 "TaxonKey is Rosalia alpina (Linnaeus, 1758)",
 "Year 2013-2023"
 ]
}

 The dataset includes 50 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033318-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sefalu
title: Occurrence Download

description: A dataset containing 14781 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ailanthus altissima (Mill.) Swingle"
 ]
}

 The dataset includes 14781 records from 259 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003826-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cw54br
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Impatiens scabrida DC."
 ]
}

 The dataset includes 149 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033336-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wxmgib
title: Occurrence Download

description: A dataset containing 188 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Frauenholz (Holzmaden)"
 ]
}

 The dataset includes 188 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003826-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zubtk8
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Mamíferos colectados en la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO"
 ]
}

 The dataset includes 133 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041158-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.flbxin
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habenaria brittonae Ames"
 ]
}

 The dataset includes 21 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003826-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4yyzum
title: Occurrence Download

description: A dataset containing 390 species occurrences available in GBIF matching the query:
{
 "CollectionCode" : [
 "is bcb"
 ]
}

 The dataset includes 390 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003826-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pd3rmn
title: Occurrence Download

description: A dataset containing 14110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Diapensiaceae"
 ]
}

 The dataset includes 14110 records from 280 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048018-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vfue2h
title: Occurrence Download

description: A dataset containing 85788 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myosotis sylvatica Ehrh. ex Hoffm.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 85788 records from 658 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040125-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29458916
title: Nucleotide diversity of synonymous and non-synonymous variants in Arabidopsis lyrata Plech population

description: To investigate patterns of nucleotide diversity, we calculated the ratio of nonsynonymous to synonymous diversity ( π<sub>N</sub>/π<sub>S </sub>). First, we analyzed the genetic variation in 17 individuals from the Plech population of Arabidopsis lyrata. I mapped the sequencing reads to the NT1 reference genome from Kolesnikova et al. (2023) using Bowtie2 and performed variant calling using GATK v4.6.1 (McKenna et al, 2010). This dataset serves as the foundation for downstream analyses, such as site frequency spectrum (SFS) estimation and demographic inference. The unfolded SFS was generated using easySFS, the output was directly compatible with demographic inference tools such as dadi. For this analysis, I used the variant calling result containing both variant and non-variant sites to compute nucleotide diversity (π) for all sites using pixy, a tool specifically designed to account for invariant sites in diversity calculations. Next, we annotated all the positions for 0-fold (nonsynonymous) and 4-fold (synonymous) sites using degenotate. Subsequently, I calculated mean  π<sub>N</sub> and mean  π<sub>S</sub>  for each gene, creating a final table of genes with their respective  π<sub>N</sub>  and  π<sub>S</sub>  values. These genes were further categorized into groups based on genetic variance components, such as additive genetic variance and  dominance variance. For each group, I performed 1000 bootstrap resampling iterations, calculating the mean  π<sub>N</sub>/π<sub>S</sub> ratio for each bootstrap. This enabled the generation of box plots visualizing the distribution of bootstrapped  π<sub>N</sub>/π<sub>S</sub>  ratios across groups, providing insights into patterns of selective pressure and molecular evolution.
DOI: 10.6084/m9.figshare.29458916.v1
title: Nucleotide diversity of synonymous and non-synonymous variants in Arabidopsis lyrata Plech population

description: To investigate patterns of nucleotide diversity, we calculated the ratio of nonsynonymous to synonymous diversity ( π<sub>N</sub>/π<sub>S </sub>). First, we analyzed the genetic variation in 17 individuals from the Plech population of Arabidopsis lyrata. I mapped the sequencing reads to the NT1 reference genome from Kolesnikova et al. (2023) using Bowtie2 and performed variant calling using GATK v4.6.1 (McKenna et al, 2010). This dataset serves as the foundation for downstream analyses, such as site frequency spectrum (SFS) estimation and demographic inference. The unfolded SFS was generated using easySFS, the output was directly compatible with demographic inference tools such as dadi. For this analysis, I used the variant calling result containing both variant and non-variant sites to compute nucleotide diversity (π) for all sites using pixy, a tool specifically designed to account for invariant sites in diversity calculations. Next, we annotated all the positions for 0-fold (nonsynonymous) and 4-fold (synonymous) sites using degenotate. Subsequently, I calculated mean  π<sub>N</sub> and mean  π<sub>S</sub>  for each gene, creating a final table of genes with their respective  π<sub>N</sub>  and  π<sub>S</sub>  values. These genes were further categorized into groups based on genetic variance components, such as additive genetic variance and  dominance variance. For each group, I performed 1000 bootstrap resampling iterations, calculating the mean  π<sub>N</sub>/π<sub>S</sub> ratio for each bootstrap. This enabled the generation of box plots visualizing the distribution of bootstrapped  π<sub>N</sub>/π<sub>S</sub>  ratios across groups, providing insights into patterns of selective pressure and molecular evolution.
DOI: 10.15468/dgpw2b
title: Penicillium thailandense (Aspergillaceae, Eurotiales), a new species isolated from soil in northern Thailand

description: This dataset contains the digitized treatments in Plazi based on the original journal article Khuna, Surapong, Kumla, Jaturong, Thitla, Tanapol, Hongsanan, Sinang, Lumyong, Saisamorn, Suwannarach, Nakarin (2023): Penicillium thailandense (Aspergillaceae, Eurotiales), a new species isolated from soil in northern Thailand. Phytotaxa 612 (1): 33-45, DOI: 10.11646/phytotaxa.612.1.2, URL: http://dx.doi.org/10.11646/phytotaxa.612.1.2AbstractA new species of soil fungi, described herein as Penicillium thailandense, was isolated from soil samples of deciduous dipterocarp forest in Lamphun Province, Thailand. This species was identified by using combination of morphological characteristics and molecular analyses. Morphologically, P. thailandense is similar to P. sanjayi, but it can be distinguished by having monoverticillate and biverticillate conidiophores, white to dark gray sclerotia, and larger conidia. Multi-gene phylogenetic analyses of a combination of the internal transcribed spacer (ITS) of ribosomal DNA, β -tubulin (BenA), calmodulin (CaM), and RNA polymerase II second largest subunit (rpb2) genes revealed that P. thailandense belongs to the Penicillium section Citrina and is distinct from other known species. This paper provides a description, illustrations, and phylogenetic tree of this novel species.
DOI: 10.15468/bydacg
title: Flavonoids in the flowers of Primula × polyantha Mill. and Primula primulina (Spreng.) H. Hara (Primulaceae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tatsuzawa, Fumi, Mizuno, Takayuki, Kikuchi, Ryo, Kato, Kazuhisa, Ota, Toru, Murai, Yoshinori, Yangzom, Rinchen, Iwashina, Tsukasa (2021): Flavonoids in the flowers of Primula × polyantha Mill. and Primula primulina (Spreng.) H. Hara (Primulaceae). Phytochemistry (112827) 189: 1-13, DOI: 10.1016/j.phytochem.2021.112827, URL: http://dx.doi.org/10.1016/j.phytochem.2021.112827
DOI: 10.15468/r788ej
title: A new species of freshwater crab of the genus Huananpotamon Dai & Ng, 1994 (Decapoda: Brachyura: Potamidae) from northern Jiangxi, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Wang, Ruxiao, Pan, Da, Sun, Hongying (2024): A new species of freshwater crab of the genus Huananpotamon Dai & Ng, 1994 (Decapoda: Brachyura: Potamidae) from northern Jiangxi, China. Zootaxa 5476 (1): 463-473, DOI: 10.11646/zootaxa.5476.1.34, URL: http://dx.doi.org/10.11646/zootaxa.5476.1.34AbstractA morphologically distinct new species of Huananpotamon Dai & Ng, 1994, is described from Yugan County, Shangrao City, Jiangxi Province, China. The new species, H. amicitiae sp. nov., can be differentiated from its closest congeners by structure of the epibranchial tooth, external orbital angle and male first gonopod. A phylogenetic analysis based on mitochondrial 16S rDNA sequences supports the recognition of the new species.
DOI: 10.15468/fwecca
title: Ariosoma tamilicum (Anguilliformes: Congridae): a new eel species from the Indian waters

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kodeeswaran, Paramasivam, Acharya, Smrutirekha, Mohapatra, Anil, Ajith Kumar, T. T. (2025): Ariosoma tamilicum (Anguilliformes: Congridae): a new eel species from the Indian waters. Zootaxa (J. Fish Biol.) 5604 (1): 69-76, DOI: 10.11646/zootaxa.5604.1.7, URL: https://doi.org/10.11646/zootaxa.5604.1.7AbstractThe identity of Ariosoma dolichopterum in Indian waters has revised. Ariosoma dolichopterum from India is an undescribed species and described herein as Ariosoma tamilicum sp. nov. based on morphology and molecular studies. Ariosoma tamilicum is morphologically closely related to Ariosoma emmae from the Taiwan waters but exhibits 13.4% genetic divergence in mitochondrial CO1 gene sequences. The formal description for the new species is provided and discussed.