cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/2p2mxx7fzk
title: Sustainable Urban Transport Based on Laplacian Energy of T-Spherical Fuzzy Graph

description: A decision matrix containing the values used in study on decision support in selecting a reliable strategy for sustainable urban transport based on Laplacian energy of T-Spherical Fuzzy Graphs
DOI: 10.17632/2twtspv9wv
title: Costa et al. Use of a food neophobia test to characterize personality traits of dairy calves. Data sets and SAS code

description: This repository contains the full data for all tests, PCA results and SAS code for analysis.
DOI: 10.17632/w25zm9cn6x
title: Make war not love: the neural substrate underlying a state-dependent switch in female social behavior. Liu et al.

description: Act-seq (10x) data in female ventral VMH, from Liu et al.
DOI: 10.3535/npm-8r1-by4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pns-bj6-5v3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24570934.v1
title: T and B cell reference results .xlsx

description: <b>lymphocyte </b><b>phenotypic characteristic</b><b> </b><b>throughout the lifespan from infancy to elderly in Chinese populations</b>
DOI: 10.3535/4b7-9an-j9e
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2cz-pan-jv4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ehj-eyv-rhb
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/knk-fpd-gxf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26736175.v2
title: vaccination hesitancy dataset.xlsx

description: Survey-based data on "Determinants of COVID-19 vaccine hesitancy in university students and support staff in Pakistan: a machine learning and statistical analysis"
DOI: 10.3535/lzc-be8-2kr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wdc-31t-e53
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yhe-aq7-4xq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2n1-7hd-swp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6kd-lye-klk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j3z-rmc-r65
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28157558.v1
title: Supplemental Tables for "Hypoxia-inducible factor 1alpha is required to establish the larval glycolytic program in <i>Drosophila melanogaster</i>"

description: <b>Objectives:</b> The rapid growth that occurs during <i>Drosophila</i> larval development requires a dramatic rewiring of central carbon metabolism to support biosynthesis. Larvae achieve this metabolic state, in part, by coordinately up-regulating the expression of genes involved in carbohydrate metabolism. The resulting metabolic program exhibits hallmark characteristics of aerobic glycolysis and establishes a physiological state that supports growth. To date, the only factor known to activate the larval glycolytic program is the <i>Drosophila</i><i> </i>Estrogen-Related Receptor (dERR). However, dERR is dynamically regulated during the onset of this metabolic switch, indicating that other factors must be involved. Here we examine the possibility the <i>Drosophila</i><i> </i>ortholog of Hypoxia inducible factor 1a (Hif1α) is also required to activate the larval glycolytic program.<b>Methods:</b><b> </b>CRISPR/Cas9 was used to generate new loss-of-function alleles in the <i>Drosophila</i><i> </i>gene <i>similar</i><i> </i>(<i>sima</i>), which encodes the sole fly ortholog of Hif1a. The resulting mutant strains were analyzed using a combination of metabolomics and RNAseq for defects in carbohydrate metabolism.<b>Results:</b> Our studies reveal that <i>sima</i><i> </i>mutants fail to activate aerobic glycolysis and die during larval development with metabolic phenotypes that mimic those displayed by <i>dERR</i><i> </i>mutants. Moreover, we demonstrate that dERR and Sima/Hif1α protein accumulation is mutually dependent, as loss of either transcription factor results in decreased abundance the other protein.<b>Conclusions:</b><b> </b>These findings demonstrate that Sima/HIF1a is required during embryogenesis to coordinately up-regulate carbohydrate metabolism in preparation for larval growth. Notably, our study also reveals that the Sima-dependent gene expression profile shares considerable overlap with that observed in <i>dERR</i><i> </i>mutant, suggesting that Sima/HIF1a and dERR cooperatively regulate embryonic and larval glycolytic gene expression.
DOI: 10.3535/5n3-gf2-asw
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/53n-fg9-xnr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8yr-ky5-jqh
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16649530.v2
title: Network: lter, Domain: arctic

description: MacroSheds timeseries data, shapefiles, and metadata for domain: arctic, within network: lter
DOI: 10.17632/5jt3m3twsh
title: Fluorescent reporters image data: Self-demixing of mRNA copies buffers mRNA:mRNA and mRNA:regulator stoichiometries

description: Fluorescent reporters raw microscopy data related to Cardona et al., Self-demixing of mRNA copies buffers mRNA:mRNA and mRNA:regulator stoichiometries. This dataset includes fluorescent reporters: - GFP:CAR-1 - SPN-4:GFP Reference Cardona et al., Self-demixing of mRNA copies buffers mRNA:mRNA and mRNA:regulator stoichiometries, Cell (2023), https://doi.org/10.1016/j.cell.2023.08.018
DOI: 10.17632/h9sdh98tg5
title: Perception of medical students regarding teaching in an integrated system

description: A self-constructed online questionnaire was distributed amongst medical students from a single institute as a pilot study. Different questions were asked to assess their perception regarding integrated medical education. It was analyzed through SPSS 16
DOI: 10.3535/9a5-4pg-bxa
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qyr-4st-y0d
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.3r5qhk
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 "TaxonKey is Fusarium torreyae T.Aoki, J.A.Sm., L.L.Mount, Geiser & O'Donnell"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009616-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/r7c7pmjynp
title: publication

description: Publication
DOI: 10.3535/510-dv8-2n5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pav-nd6-y6q
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/tz22j9vtnz
title: A PVA/ g-C3N4 nano antibacterial paper for antibacterial preservation of fresh pork

description: This is the data related to the preparation of pva/g-c3n4 nano antibacterial paper and its application in fresh pork preservation.In this study, we initially transformed the lamellar porous bulk g-C3N4 into g-C3N4 nanosheets (CNNs) using the thermal oxidation stripping method. This process aimed to increase reactive sites and facilitate the rapid transfer of photogenerated electrons, thereby augmenting its photocatalytic antibacterial activity. Subsequently, we fabricated PVA/CNNs nano antibacterial paper via a coating method that involved the utilization of the biodegradable material polyvinyl alcohol (PVA). We assessed the antibacterial properties of the PVA/CNNs nano antibacterial paper against Escherichia coli and Staphylococcus aureus. Furthermore, we conducted a preliminary evaluation of the application of g-C3N4 in antibacterial preservation of fresh pork through preservation experiments. This evaluation serves as a reference for the potential utilization of g-C3N4 in the realm of antibacterial food preservation.The inclusion of 0.7 wt% g-C3N4 in PVA/ g-C3N4 nano antibacterial paper exhibited remarkable antibacterial effects (99.6% against Escherichia coli and 99.7% against Staphylococcus aureus), concurrently improving the paper's physical properties. Employing this functional antibacterial paper for fresh pork preservation effectively retards the growth of total bacterial count, pH value, TVB-N value, and water loss rate. It also aids in sustaining the hardness and color of fresh meat, consequently extending its shelf life.
DOI: 10.3535/68c-8gp-t6j
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8mg-zx3-ggw
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5104411.v1
title: Supplementary Material for: ICAM-3 Activation Modulates Cell-Cell Contacts of Human Bone Marrow Endothelial Cells

description: The Ig-like cell adhesion molecule ICAM-3 is mainly expressed on human leukocytes and is involved in cell-cell interactions. Its expression on endothelium is observed during disorders such as Crohn’s disease and in solid tumors. We found low but detectable expression of ICAM-3 on VE-cadherin-expressing cells from primary human bone marrow aspirates, i.e. endothelial cells, and on primary human endothelial cells from cord blood. Also, immortalized human umbilical cord endothelial cells and human bone marrow endothelial cells showed ICAM-3 expression. However, its function on human endothelium is not known. Surprisingly, activation of endothelial ICAM-3 by crosslinking with specific antibodies resulted in a drop in the electrical resistance of bone marrow endothelial monolayers. In line with this, immunocytochemical analysis showed a loss of endothelial cell-cell contacts after ICAM-3 crosslinking in HBMEC. Detailed biochemical analysis showed an association of moesin and in a later stage ezrin with ICAM-3 upon crosslinking in HBMEC. Moreover, ICAM-3 crosslinking induced the production of reactive oxygen species (ROS), which are known to be involved in the control of endothelial cell-cell contacts. In conclusion, we showed that ICAM-3 is expressed on human bone marrow endothelial cells and controls endothelial integrity via ROS-dependent signaling.
DOI: 10.17632/8d4yz5fyhy
title: Data for paper - TrackUSF, a novel tool for automated ultrasonic vocalization analysis, reveals modified calls in a rat model of autism

description: The attached file includes the final results of the analysis done by TrackUSF software for all datasets included in the paper:
TrackUSF, a novel tool for automated ultrasonic vocalization analysis, reveals modified calls in a rat model of autism 
By - Shai Netser, Guy Nahardiya, Gili Weiss-Dicker, Roei Dadush, Yizhaq Goussha, Shanah John, Mor Taub, Yuval Werber, Nir Sapir, Yossi Yovel, Hala Harony-Nicolas, Joseph Buxbaum, Lior Cohen, Koby Crammer and Shlomo Wagner.
DOI: 10.3535/by5-1cw-rwa
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m2j-b6y-rt0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/h3r8ygnjfd
title: The invasive seaweed Asparagopsis taxiformis erodes the habitat structure and biodiversity of native algal forests in the Mediterranean Sea - data and scripts

description: This repository contains files to reproduce the analyses carried out in the paper "The invasive seaweed Asparagopsis taxiformis erodes the habitat structure and biodiversity of native algal forests in the Mediterranean Sea."
DOI: 10.17632/s8cgvhj9wz
title: Datasets for validity of a vertical drain system as a lumped model

description: The dual-porosity medium includes the natural/irregular and the artificial/regular (figure 1), and latter is applied more and more in our engineering practice, e.g. a vertical drain system. Figure 2 shows that the structure of the drain system and their terminology. Based on heat-conduction theory, the lumped model was applied to a derivation process in order to acquire a quasi-thermodynamics solution involving some parameters such as Biot number (BiV) and Fourier number (FoV). The universality of the solution make it also applicable to the dual-porosity medium problem. An analogy graph to the vertical drain system was shown in Figure 3. In order to further analysis, the deconstruction of the vertical drain system is performed to divide the system into both parts of an external convective environment (drain wells) and an internal conductive medium (soil matrix) as shown in figure 4. The effective permeability coefficient keff(s), relevant to the drainage behavior of external expel facility, was derived and analyzed based on the graph of deconstruction (figure 5a). Comparing it with the equivalent permeability coefficient keq, which is represented the hydraulic conductive behavior of internal soil matrix, was performed. The convergent relationship between both of permeability coefficients was evaluated through the ratio of keff(s) and keq. A further analysis was carried out to the equivalent permeability keq under consideration of the effects of curvature and divergence, respectively, as shown in figure 6. Figure 7 shows the variation of BiV number with drain spacing ratio n-value to indicate the validity of a vertical drain system as a lumped model. All of above data were calculated through software of Matlab R2015a before they were made the series of graphs. A series of discussion was performed to demonstrate graphically the dissipation process of excess pore pressure of a drain well solved by analytical solution (figure 8) and a comparison between analytical solution and numerical was given in figure 9. Finally, a numerical simulation (figures 10 and 11) by use of FLAC3D5.0 software was carried out for visualizing the process of excess pore pressure dissipation better. The raw data for all above figures produced by aid of calculation software are listed in the dataset specified in the next section of this article. For convenient indexing, they are named in the form of ×××.data_for_fig.number with the ＊.csv file type.
DOI: 10.3535/d3k-sef-fwm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v45-1er-qkc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3751553_d41.v1
title: Additional file 47: of The protein subunit of telomerase displays patterns of dynamic evolution and conservation across different metazoan taxa

description: Multiple sequence alignment of the N-terminal linker region in piroplasmids. (FASTA 455 bytes)
DOI: 10.17632/zvcfj89tdc
title: Closepet titanite

description: Data set for a submitted to Lithos paper: High-temperature fluids in granites during the Neoarchaean-Palaeoproterozoic transition: insight from Closepet titanite chemistry and U-Pb dating (Dharwar craton, India)
Authors: Ewa Słaby, Robert Anczkiewicz, Katarzyna Gros, Klaus Simon, Gabriela A. Kozub-Budzyń, Łukasz Birski, Hervé Martin, Mudlappa Jayananda, Jean-François Moyen, Milena Matyszczak, Marta Koziarska, Ewa Deput
DOI: 10.3535/139-8t2-sy6
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3bf-m0d-qyh
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8vk-5kn-2cq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m7a-xxd-306
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12885617.v1
title: Orthogroups list

description: A tab delimited file of the orthogroups that generated by using Orthofinder 2. Analyzed species include the common pheasant ,green anole, chicken, turkey, Japanese quail, Guinea fowl, duck, goose, great tit, zebra finch, flycatcher, budgerigar, emu, human, mouse, and platypus.
DOI: 10.3535/c87-gak-hmw
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/557-jsp-z1c
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vxm-1ng-gcp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12651074.v2
title: Extended Data for A rooted phylogeny resolves early bacterial evolution

description: Extended Data for A rooted phylogeny resolves early bacterial evolution
DOI: 10.17632/84bczykzg2
title: HOMOGENEIZAÇÃO NUMÉRICA PARA A AVALIAÇÃO DA RESISTÊNCIA MECÂNICA DE MATERIAIS POROSOS COM MATRIZ DE VON MISES E POROS ESFEROIDAIS

description: Anais do II Simpósio Gaúcho de Engenharia Aeroespacial e Mecânica, UFSM
Santa Maria, RS, 24 a 26 de outubro de 2023
DOI: 10.25405/data.ncl.28351814.v2
title: Sedimentary Architecture of UK Wandering Gravel-Bed Rivers, River Coquet, Northumberland, UK

description: GPR and topographic survey using (dGPS) were carried out on the River Coquet between May 17 and June 1, 2017. We used a NERC Geophysical Equipment Facility (GEF) Sensor and Software Pulse Ekko Pro GPR with a 1000V transmitter system, and 50, 100 and 200 MHz antennas (Figure 2). A common offset (CO) survey using three different frequencies of antennas (50, 100 and 200MHz) was performed along single line in the first survey grid (Thropton grid) in order to establish depth of penetration and data resolution, to determine which antenna set would be most appropriate to address the scientific goals of the project. Subsequent GPR grids at Hepple and Holystone were conducted at frequencies of 50, 100 MHz and 100 MHz, respectively.
DOI: 10.3535/bvr-gdf-90d
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q76-r1t-474
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13293419.v1
title: Emergency Settlements - Raw Data

description: This document comprises of an Excel spreadsheet with data on five humdred Emergency Settlements (refugee camps, IDP settlements, Community settlements), open and closed, including name location, size (physical and population), demographics, and background.<br>
DOI: 10.6084/m9.figshare.19660686.v1
title: 10x Single-Cell RNAseq Lung (External Test Set)

description: Human lung cells from five cell-types with labels in a SingleCellExperiment object. These data can be used as an external test set to evaluate cell-type annotation classifiers. The cells are taken from the following study: <br> Wang, A., Chiou, J., Poirion, O. B., Buchanan, J., Valdez, M. J., Verheyden, J. M., ... & NHLBI LungMap Consortium. (2020). Single-cell multiomic profiling of human lungs reveals cell-type-specific and age-dynamic control of SARS-CoV2 host genes. <em>Elife</em>, <em>9</em>, e62522.
DOI: 10.6084/m9.figshare.23910117.v1
title: FileS4_surface_mesh_Synchrotron.stl

description: 3D-surface mesh of of vascular network imaged by Synchrotron-based propagation-based imaging (PBI).
DOI: 10.17632/y5hs9c24v3
title: The PRISMA checklist and Evaluation of searched papers of An Assessment of Contemporary Methods and Data-Enabled Approaches for Early Cataract Detection

description: The PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) checklist is a series of standards intended to improve the transparency and completeness of systematic review and meta-analysis reporting. It assists researchers and reviewers in ensuring that crucial information is included in their studies, making it easier to judge the quality and dependability of the research. Adherence to the PRISMA checklist is critical in the context of early cataract detection research to guarantee that the study is well-documented and the results may be appropriately interpreted by other researchers and healthcare practitioners.
DOI: 10.3535/ahq-yt5-rmg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yh4-8zs-37j
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.6974321.v6
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: Youtube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-onlinerepository.xlsx
DOI: 10.17632/pzmfksk3rr
title: Multielement content of premium cocoa beans from Ghana

description: This data consist of multielement content of cocoa beans (mg/kg) from Gambia number 2, Tanoso (Ahafo), Konongo, Tepa, Tafo, Juaso, Mankranso (Ashanti) Nkrankwanta, Nkasapin, Jinijini/Dormaa and Dormaa Ahenkro (Bono) Adwafo, Nkawkaw, Akim Oda, and Akim Achease (Eastern). They were analysed using Niton XL3t GOLD X-ray ﬂuorescence (FP-XRF) spectrometer.
DOI: 10.3535/92c-ac6-9dx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z4v-j3s-y29
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.