cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/41825ac3c486a2858c51462e968e3a42
title: Soil biota data from the Biotic Effects Experiment (BEE), McMurdo Dry Valleys, Antarctica (1999-2020, ongoing)

description: Increases in soil temperature and moisture may change the bioavailability of essential elements by altering solubility and diffusion rates in soils, or by changing the amounts of organic compounds. Long-term experiments in the Bonney, Hoare and Fryxell basins have been established with 3 treatments: 1) increased moisture, 2) soil warming (ITEX chambers), and 3) soil warming + increased moisture. The identification and abundance of soil biota are reported.
DOI: 10.6073/pasta/4e965fbbea4e6c3cad25fc044ded333d
title: Soil biota data from the Pulse-Press Project (P3), McMurdo Dry Valleys, Antarctica (2010-2020, ongoing)

description: Climate warming in polar regions is associated with thawing of permafrost, resulting in significant changes in soil hydrology, biogeochemical cycling, and in the activity and composition of soil communities. While ongoing, directional climate warming can elicit such responses over decadal time scales, their manifestation typically occurs as discrete thawing pulses. Indeed, in the McMurdo Dry Valleys of Antarctica abrupt changes in community structure and biogeochemical cycling in terrestrial and aquatic ecosystems following a summer warming event (Jan. 2002) exceeded the influences of a decadal cooling trend in both magnitude and rate of response. Thus, we anticipate that climate-mediated permafrost changes and their associated impacts on soil communities and biogeochemical cycles may occur over seasonal time scales. Our objective is to simulate different frequencies of permafrost thawing events in Antarctic permafrost soils. Since the top horizons of most Antarctic soils are dry permafrost (i.e., there is insufficient water content to generate ice-cement), with ice-cement or massive ice typically below 30 cm, permafrost thawing events are likely to result in subsurface movements of water that may manifest as groundwater seeps down gradient.
DOI: 10.5281/zenodo.6369188
title: Molecular data from "Between a rock and a dry place: phylogenomics, biogeography, and systematics of ridge-tailed monitors (Squamata: Varanidae: Varanus acanthurus complex)"

description: <strong>Phylogenetic_dataset.csv</strong>: Unfiltered DArTseq data used in phylogenetic analyses. Readable by 'dartR' (Gruber et al. 2018). <strong>Population_dataset.csv</strong>: Unfiltered DArTseq data used in population-level analyses. Readable by 'dartR' (Gruber et al. 2018). <strong>Reference.csv</strong>: Spreadsheet listing individuals included in molecular analyses. Includes vouchers, species, name of each sample in DArTseq data sets, and GenBank accession numbers (GB) for mitochondrial data. ABTC stands for Australian Biological Tissue Collection; AA and CCM for field numbers of uncatalogued specimens. Other collection acronyms follow Sabaj (2019). We refrain from assigning individuals that were not included in the molecular analyses to any given species.
description: {"references": ["Gruber, B., Unmack, P. J., Berry, O. F., & Georges, A. (2018). dartr: An r package to facilitate analysis of SNP data generated from reduced representation genome sequencing. Mol. Ecol. Resour., 18(3), 691\u2013699.", "Sabaj M. H. (2016). Standard symbolic codes for institutional resource collections in herpetology and ichthyology: an online reference. Version 6.5 (16 August 2016). Available at: http://www.asih.org/."]}
DOI: 10.5281/zenodo.6369187
title: Molecular data from "Between a rock and a dry place: phylogenomics, biogeography, and systematics of ridge-tailed monitors (Squamata: Varanidae: Varanus acanthurus complex)"

description: <strong>Phylogenetic_dataset.csv</strong>: Unfiltered DArTseq data used in phylogenetic analyses. Readable by 'dartR' (Gruber et al. 2018). <strong>Population_dataset.csv</strong>: Unfiltered DArTseq data used in population-level analyses. Readable by 'dartR' (Gruber et al. 2018). <strong>Reference.csv</strong>: Spreadsheet listing individuals included in molecular analyses. Includes vouchers, species, name of each sample in DArTseq data sets, and GenBank accession numbers (GB) for mitochondrial data. ABTC stands for Australian Biological Tissue Collection; AA and CCM for field numbers of uncatalogued specimens. Other collection acronyms follow Sabaj (2019). We refrain from assigning individuals that were not included in the molecular analyses to any given species.
description: {"references": ["Gruber, B., Unmack, P. J., Berry, O. F., & Georges, A. (2018). dartr: An r package to facilitate analysis of SNP data generated from reduced representation genome sequencing. Mol. Ecol. Resour., 18(3), 691\u2013699.", "Sabaj M. H. (2016). Standard symbolic codes for institutional resource collections in herpetology and ichthyology: an online reference. Version 6.5 (16 August 2016). Available at: http://www.asih.org/."]}
DOI: 10.6084/m9.figshare.19385762
title: Dataset of coral reefs monitoring, Puerto Morelos, Mexico, 2019

description: This dataset (in Excel format) represents in-situ information about the evaluation realized to eight shallow coral reef sites of the Arrecife de Puerto Morelos National Park in June 2019, with the purpose of applying a coral reef assessment method, based on biological indicators of the condition of both benthos and fish communities. We present tables with data of biological and ecological variables such as: benthos coverage, species composition and abundance of corals, abundance of urchins and coral recruits, coral bleaching, coral diseases and coral mortality percentages, reef relief, and composition and abundance of key commercial and herbivorous fish species. This product is the result of one year of work of the Monitoring Program for Protected Natural Areas in the Mexican Caribbean, coordinated by CONABIO.<br><b>Acknowledgments</b>The authors acknowledge the logistical support provided by CONABIO, the Marine Science and Limnology Institute of UNAM, and the director of the Arrecife de Puerto Morelos National Park, María del Carmen García Rivas. The authors appreciate the support during fieldwork provided by the boat captain Alex. <br>
DOI: 10.18120/d2vq-xt54
title: Walker Call
DOI: 10.5281/zenodo.6368105
title: Supplemental data files: XY sex determination in a cnidarian

description: <strong>Project Abstract:</strong> Sex determination occurs across animal species, but most of our knowledge about the mechanisms of sex determination comes from only a handful of bilaterian taxa. This limits our ability to infer the evolutionary history of sex determination within animals. In this study, we generated a linkage map of the genome of the colonial cnidarian <em>Hydractinia symbiolongicarpus</em> and used this map to determine that this species has an XX/XY sex determination system. We delineate the pseudoautosomal and non-recombining regions of the Y chromosome and show that the latter encodes a number of genes with male gonad-specific expression. These findings establish Hydractinia as a tractable non-bilaterian model system for the study of sex determination. This archive contains supplemental data files for "XY sex determination in a cnidarian" by Chen et. al. The manuscript will be submitted to bioRxiv. <strong>160429_CRATOS_HKM5MBCXX.lane1.12268798.read1.DOWNSAMPLE_0.2.fq.gz: </strong>Illumina reads for paternal genome downsampled with seqtk. <strong>160429_CRATOS_HKM5MBCXX.lane1.12268798.read2.DOWNSAMPLE_0.2.fq.gz: </strong>Illumina reads for paternal genome downsampled with seqtk. <strong>rawvariants.90f1.vcf.gz: </strong>Raw genotypes for all 90 offspring and the two parents, called by GATK HaplotypeCaller <strong>GATKBP-passed.vcf.gz: </strong>Genotypes quality filtered according to GATK best practices and custom critera. <strong>GATKBP-passed.femaleHet.abxabRemoved.vcf.gz: </strong>Genotypes suitable for mapping the maternal genome with a pseudo-testcross strategy. <strong>GATKBP-passed.maleHet.abxabRemoved.vcf.gz: </strong>Genotypes suitable for mapping the paternal genome with a pseudo-testcross strategy.
DOI: 10.6084/m9.figshare.19333295
title: Datasets from FEM Simulations done with COMSOL Multiphysics and Code_Aster.

description: Datasets from FEM Simulations done with COMSOL Multiphysics and Code_Aster for an elastic stress transfer between matrix and fibres having a variable radius.
DOI: 10.6084/m9.figshare.19333295.v1
title: Datasets from FEM Simulations done with COMSOL Multiphysics

description: Datasets from FEM Simulations done with COMSOL Multiphysics for an elastic stress transfer between matrix and fibres having a variable radius
DOI: 10.23728/b2share.d58c8710010f415c88608aa1d3b172b3
title: Assessment of a subgrid-scale model for convection-dominated mass transfer for initial transient rise of a bubble

description: Data accompanying the publication "Assessment of a subgrid-scale model for convection-dominated mass transfer for the initial transient rise of a bubble".
DOI: 10.5281/zenodo.6369230
title: Refinement of an Attacker Model for Attack Paths Generation | Test Dataset

description: This repository contains the test models and associated tests of the evaluation of the bachelor thesis "Refinement of an Attacker Model for Attack Paths Generation" / German: "Verfeinerung des Angreifermodells und Fähigkeiten in einer Angriffspfadgenerierung". The basis for the model used is the TravelPlaner CaseStudy. The tests for measuring the performance delta are also included. Palladio Bench 5, Java 11 and the following GitHub repositories are used for execution:<br> Analysis: https://github.com/Patrick-Spiesberger/Palladio-Addons-ContextConfidentialityAnalysis_Mitigation<br> Meta model: https://github.com/Patrick-Spiesberger/Palladio-Addons-ContextConfidentialityMetamodell_Mitigation<br> <br> Environment installation is included in the README files. See also the previous work by Maximilian Walter:<br> Analysis: https://github.com/FluidTrust/Palladio-Addons-ContextConfidentiality-Analysis<br> Meta Model: https://github.com/FluidTrust/Palladio-Addons-ContextConfidentiality-Metamodel
DOI: 10.5281/zenodo.6369229
title: Refinement of an Attacker Model for Attack Paths Generation | Test Dataset

description: This repository contains the test models and associated tests of the evaluation of the bachelor thesis "Refinement of an Attacker Model for Attack Paths Generation" / German: "Verfeinerung des Angreifermodells und Fähigkeiten in einer Angriffspfadgenerierung". The basis for the model used is the TravelPlaner CaseStudy. The tests for measuring the performance delta are also included. Palladio Bench 5, Java 11 and the following GitHub repositories are used for execution:<br> Analysis: https://github.com/Patrick-Spiesberger/Palladio-Addons-ContextConfidentialityAnalysis_Mitigation<br> Meta model: https://github.com/Patrick-Spiesberger/Palladio-Addons-ContextConfidentialityMetamodell_Mitigation<br> <br> Environment installation is included in the README files. See also the previous work by Maximilian Walter:<br> Analysis: https://github.com/FluidTrust/Palladio-Addons-ContextConfidentiality-Analysis<br> Meta Model: https://github.com/FluidTrust/Palladio-Addons-ContextConfidentiality-Metamodel
DOI: 10.15468/dl.pactmz
title: Occurrence Download

description: A dataset containing 769 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Phocoena phocoena (Linnaeus, 1758)"
 ]
}

 The dataset includes 769 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060810-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pvtmqd
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphorbia bongolavensis Rauh"
 ]
}

 The dataset includes 17 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029645-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3sluo
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dypsis decaryi (Jum.) Beentje & J.Dransf."
 ]
}

 The dataset includes 82 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003138-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6xyyru
title: Occurrence Download

description: A dataset containing 41816 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Natrix natrix (Linnaeus, 1758)"
 ]
}

 The dataset includes 41816 records from 187 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077983-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ccmuh
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stemonoporus bullatus Kosterm."
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029671-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ur873
title: Occurrence Download

description: A dataset containing 376 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Verticillium albo-atrum Reinke & Berthold"
 ]
}

 The dataset includes 376 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056812-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.iv1g1i
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Schedophilus medusophagus (Cocco, 1839)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 76 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003138-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pfynau
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Primula anisodora Balf.fil. & Forrest",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 48 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003138-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.848cqq
title: Occurrence Download

description: A dataset containing 52278 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bombus terrestris (Linnaeus, 1758)"
 ]
}

 The dataset includes 52278 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034646-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g2p2su
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "TaxonKey is Ficus guianensis Desv.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000316-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lnn9ay
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Opuntia velutina F.A.C.Weber"
 ]
}

 The dataset includes 451 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003138-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mkam28
title: Occurrence Download

description: A dataset containing 75084 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rauenia bonariensis (J.F.Gmelin, 1789)"
 ]
}

 The dataset includes 75084 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029656-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fuzhm2
title: Occurrence Download

description: A dataset containing 16760 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Schoenus apogon Roem. & Schult.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 16760 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000316-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5xkqj8
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-11.03291 35.17418,4.06949 35.17418,4.06949 43.95996,-11.03291 43.95996,-11.03291 35.17418))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Salvinia ×molesta D.S.Mitch."
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029689-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zknr4h
title: Occurrence Download

description: A dataset containing 4595 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vultur gryphus Linnaeus, 1758"
 ]
}

 The dataset includes 4595 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003139-150316153013904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b47x87
title: Occurrence Download

description: A dataset containing 219 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Verbascum phoeniceum L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 219 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003139-150410134957023/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8vdny
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aglaia heterotricha A.C.Sm."
 ]
}

 The dataset includes 8 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029707-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29fvhz
title: Occurrence Download

description: A dataset containing 1820 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Morchella esculenta (L.) Pers."
 ]
}

 The dataset includes 1820 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003139-150721130643939/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1soybg
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 6) Distribution of calcareous nannoplankton in selected samples of ODP Hole 112-683B"
 ]
}

 The dataset includes 20 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000316-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rg6m59
title: Occurrence Download

description: A dataset containing 698862 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is CAS Botany (BOT)"
 ]
}

 The dataset includes 698862 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043901-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rjirjy
title: Occurrence Download

description: A dataset containing 278236 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sorbus aucuparia L."
 ]
}

 The dataset includes 278236 records from 678 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003139-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eydzfy
title: Occurrence Download

description: A dataset containing 46432 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Marine Microbes from RV Investigator voyage IN2014_E03, Australia (2014)"
 ]
}

 The dataset includes 46432 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043948-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.56pu8u
title: Occurrence Download

description: A dataset containing 13700 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mosquito Alert Dataset"
 ]
}

 The dataset includes 13700 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0139815-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tag638
title: Occurrence Download

description: A dataset containing 182 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xyris lacera R.Br."
 ]
}

 The dataset includes 182 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003139-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.btc3h6
title: Occurrence Download

description: A dataset containing 264 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-11.03291 35.17418,4.06949 35.17418,4.06949 43.95996,-11.03291 43.95996,-11.03291 35.17418))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pennisetum villosum Fresen."
 ]
}

 The dataset includes 264 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029652-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.