cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16620822.v1
title: Additional file 8 of Dynamic capacity allocation in a radiology service considering different types of patients, individual no-show probabilities, and overbooking

description: Additional file 8:. Solution presented by the model for the problem.
DOI: 10.6084/m9.figshare.16620826.v1
title: Additional file 2 of Changes in the b value in and around the focal areas of the M6.9 and M6.8 earthquakes off the coast of Miyagi prefecture, Japan, in 2021

description: Additional file 2. It includes numerical data that list the longitude and latitude consisting of slip contours of the M6.9 earthquake.
DOI: 10.6084/m9.figshare.16620826
title: Additional file 2 of Changes in the b value in and around the focal areas of the M6.9 and M6.8 earthquakes off the coast of Miyagi prefecture, Japan, in 2021

description: Additional file 2. It includes numerical data that list the longitude and latitude consisting of slip contours of the M6.9 earthquake.
DOI: 10.6084/m9.figshare.16620829.v1
title: Additional file 3 of Changes in the b value in and around the focal areas of the M6.9 and M6.8 earthquakes off the coast of Miyagi prefecture, Japan, in 2021

description: Additional file 3. It includes numerical data that list the longitude and latitude consisting of slip contours of the M6.8 earthquake.
DOI: 10.6084/m9.figshare.16620829
title: Additional file 3 of Changes in the b value in and around the focal areas of the M6.9 and M6.8 earthquakes off the coast of Miyagi prefecture, Japan, in 2021

description: Additional file 3. It includes numerical data that list the longitude and latitude consisting of slip contours of the M6.8 earthquake.
DOI: 10.6084/m9.figshare.16620909
title: Additional file 1 of Rainfall driven and wild-bird mediated avian influenza virus outbreaks in Australian poultry

description: Additional file 1
DOI: 10.6084/m9.figshare.16620909.v1
title: Additional file 1 of Rainfall driven and wild-bird mediated avian influenza virus outbreaks in Australian poultry

description: Additional file 1
DOI: 10.6084/m9.figshare.16620925
title: Additional file 1 of PathFams: statistical detection of pathogen-associated protein domains

description: Additional file 1.
DOI: 10.6084/m9.figshare.16620925.v1
title: Additional file 1 of PathFams: statistical detection of pathogen-associated protein domains

description: Additional file 1.
DOI: 10.6084/m9.figshare.16620936
title: Additional file 2 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 2. The top 50 most significantly enriched GO categories for chicken in caecal tissue collected at 1, 2, 3, 4 and 10 days after E. tenella infection.
DOI: 10.6084/m9.figshare.16620933.v1
title: Additional file 1 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 1. The number of reads generated for each time point in RNA isolated from caecal tissue collected from uninfected chickens and chickens 1, 2, 3, 4 and 10 days after E. tenella infection.
DOI: 10.6084/m9.figshare.16620936.v1
title: Additional file 2 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 2. The top 50 most significantly enriched GO categories for chicken in caecal tissue collected at 1, 2, 3, 4 and 10 days after E. tenella infection.
DOI: 10.6084/m9.figshare.16620933
title: Additional file 1 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 1. The number of reads generated for each time point in RNA isolated from caecal tissue collected from uninfected chickens and chickens 1, 2, 3, 4 and 10 days after E. tenella infection.
DOI: 10.6084/m9.figshare.16620939.v1
title: Additional file 3 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 3. The top 50 most significantly enriched GO categories for E. tenella in chicken caecal tissue collected at 1, 2, 3, 4 and 10 days after infection.
DOI: 10.6084/m9.figshare.16620939
title: Additional file 3 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 3. The top 50 most significantly enriched GO categories for E. tenella in chicken caecal tissue collected at 1, 2, 3, 4 and 10 days after infection.
DOI: 10.6084/m9.figshare.16620942
title: Additional file 4 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 4. The top 50 most significantly enriched KEGG pathways for chicken in caecal tissue collected at 1, 2, 3, 4 and 10 days after E. tenella infection.
DOI: 10.6084/m9.figshare.16620948
title: Additional file 5 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 5. The top 50 most significantly enriched KEGG pathways for E. tenella in chicken caecal tissue collected at 1, 2, 3, 4 and 10 days after infection.
DOI: 10.6084/m9.figshare.16620942.v1
title: Additional file 4 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 4. The top 50 most significantly enriched KEGG pathways for chicken in caecal tissue collected at 1, 2, 3, 4 and 10 days after E. tenella infection.
DOI: 10.6084/m9.figshare.16620948.v1
title: Additional file 5 of Dual RNA-seq transcriptome analysis of caecal tissue during primary Eimeria tenella infection in chickens

description: Additional file 5. The top 50 most significantly enriched KEGG pathways for E. tenella in chicken caecal tissue collected at 1, 2, 3, 4 and 10 days after infection.
DOI: 10.6084/m9.figshare.16620964
title: Additional file 1 of Disparities in excess deaths from the COVID-19 pandemic among migrant workers in Kuwait

description: Additional file 1.
DOI: 10.6084/m9.figshare.16620964.v1
title: Additional file 1 of Disparities in excess deaths from the COVID-19 pandemic among migrant workers in Kuwait

description: Additional file 1.
DOI: 10.6084/m9.figshare.16620960
title: Additional file 10 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 10: Table S9. Count of transposons repeat intersecting with the medical relevant genes.
DOI: 10.6084/m9.figshare.16620966
title: Additional file 12 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 12: Table S11. Run time for PacBio HiFi data.
DOI: 10.6084/m9.figshare.16620960.v1
title: Additional file 10 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 10: Table S9. Count of transposons repeat intersecting with the medical relevant genes.
DOI: 10.6084/m9.figshare.16620963
title: Additional file 11 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 11: Table S10. Repeat percentage in 193 medical relevant genes.
DOI: 10.6084/m9.figshare.16620963.v1
title: Additional file 11 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 11: Table S10. Repeat percentage in 193 medical relevant genes.
DOI: 10.6084/m9.figshare.16620966.v1
title: Additional file 12 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 12: Table S11. Run time for PacBio HiFi data.
DOI: 10.6084/m9.figshare.16620969
title: Additional file 13 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 13: Table S12. Data availability.
DOI: 10.6084/m9.figshare.16620969.v1
title: Additional file 13 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 13: Table S12. Data availability.
DOI: 10.6084/m9.figshare.16620972
title: Additional file 14 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 14: Table S13. Summary of the identified variant in the sample HS1011.
DOI: 10.6084/m9.figshare.16620972.v1
title: Additional file 14 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 14: Table S13. Summary of the identified variant in the sample HS1011.
DOI: 10.6084/m9.figshare.16620975.v1
title: Additional file 15 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 15: Table S14. Genotype benchmark percentage using different algorithms.
DOI: 10.6084/m9.figshare.16620978
title: Additional file 16 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 16: Table S15. Structural variant phasing benchmark.
DOI: 10.6084/m9.figshare.16620978.v1
title: Additional file 16 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 16: Table S15. Structural variant phasing benchmark.
DOI: 10.6084/m9.figshare.16620975
title: Additional file 15 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 15: Table S14. Genotype benchmark percentage using different algorithms.
DOI: 10.6084/m9.figshare.16620981
title: Additional file 17 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 17: Table S16. PacBio HiFi different insert size SV benchmark.
DOI: 10.6084/m9.figshare.16620981.v1
title: Additional file 17 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 17: Table S16. PacBio HiFi different insert size SV benchmark.
DOI: 10.6084/m9.figshare.16620984
title: Additional file 18 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 18: Table S17. PacBio HiFi different insert size SNVs and indels benchmark.
DOI: 10.6084/m9.figshare.16620984.v1
title: Additional file 18 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 18: Table S17. PacBio HiFi different insert size SNVs and indels benchmark.
DOI: 10.6084/m9.figshare.16620987
title: Additional file 19 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 19: Table S18. PacBio HiFi with different insert size phasing benchmark.
DOI: 10.6084/m9.figshare.16620987.v1
title: Additional file 19 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 19: Table S18. PacBio HiFi with different insert size phasing benchmark.
DOI: 10.6084/m9.figshare.16620993
title: Additional file 20 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 20: Table S19. SNVs and indels benchmarking without PRINCESS filter.
DOI: 10.6084/m9.figshare.16620993.v1
title: Additional file 20 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 20: Table S19. SNVs and indels benchmarking without PRINCESS filter.
DOI: 10.6084/m9.figshare.16620999
title: Additional file 2 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 2: Table S1. PacBio HiFi data with different insert size SNVs and indels calling benchmark with and without filtering.
DOI: 10.6084/m9.figshare.16621002
title: Additional file 3 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 3: Table S2. Table of SNVs and indels benchmarking using PRINCESS filter.
DOI: 10.6084/m9.figshare.16621021
title: Additional file 1 of PREparedness, REsponse and SySTemic transformation (PRE-RE-SyST): a model for disability-inclusive pandemic responses and systemic disparities reduction derived from a scoping review and thematic analysis

description: Additional file 1.
DOI: 10.6084/m9.figshare.16620999.v1
title: Additional file 2 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 2: Table S1. PacBio HiFi data with different insert size SNVs and indels calling benchmark with and without filtering.
DOI: 10.6084/m9.figshare.16621002.v1
title: Additional file 3 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 3: Table S2. Table of SNVs and indels benchmarking using PRINCESS filter.
DOI: 10.6084/m9.figshare.16621005
title: Additional file 4 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 4: Table S3. Genotype benchmarking count across different algorithms, Clair2, WhatsHap genotype, WhatsHap trust, and WhatsHap untrust.
DOI: 10.6084/m9.figshare.16621021.v1
title: Additional file 1 of PREparedness, REsponse and SySTemic transformation (PRE-RE-SyST): a model for disability-inclusive pandemic responses and systemic disparities reduction derived from a scoping review and thematic analysis

description: Additional file 1.
DOI: 10.6084/m9.figshare.16621005.v1
title: Additional file 4 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 4: Table S3. Genotype benchmarking count across different algorithms, Clair2, WhatsHap genotype, WhatsHap trust, and WhatsHap untrust.
DOI: 10.6084/m9.figshare.16621008
title: Additional file 5 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 5: Table S4. Structural variant benchmarking.
DOI: 10.6084/m9.figshare.16621008.v1
title: Additional file 5 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 5: Table S4. Structural variant benchmarking.
DOI: 10.6084/m9.figshare.16621011
title: Additional file 6 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 6: Table S5. Phasing benchmarking.
DOI: 10.6084/m9.figshare.16621011.v1
title: Additional file 6 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 6: Table S5. Phasing benchmarking.
DOI: 10.6084/m9.figshare.16621014
title: Additional file 7 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 7: Table S6. Capture data SV benchmark.
DOI: 10.6084/m9.figshare.16621017
title: Additional file 8 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 8: Table S7. Capture data methylation benchmark.
DOI: 10.6084/m9.figshare.16621014.v1
title: Additional file 7 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 7: Table S6. Capture data SV benchmark.
DOI: 10.6084/m9.figshare.16621017.v1
title: Additional file 8 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 8: Table S7. Capture data methylation benchmark.
DOI: 10.6084/m9.figshare.16621020
title: Additional file 9 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 9: Table S8. Sample HS1011 variant intersection with repeat regions.
DOI: 10.6084/m9.figshare.16621020.v1
title: Additional file 9 of PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation

description: Additional file 9: Table S8. Sample HS1011 variant intersection with repeat regions.
DOI: 10.6084/m9.figshare.16621039
title: Additional file 1 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 1. List of ASO sequences.
DOI: 10.6084/m9.figshare.16621039.v1
title: Additional file 1 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 1. List of ASO sequences.
DOI: 10.6084/m9.figshare.16621042
title: Additional file 2 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 2. List of CAGE-Seq libraries with corresponding sequencing statistics.
DOI: 10.6084/m9.figshare.16621045
title: Additional file 3 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 3. Differential expressed genes of negative control ASOs (A and B) against untransfected reference control in BECs.
DOI: 10.6084/m9.figshare.16621045.v1
title: Additional file 3 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 3. Differential expressed genes of negative control ASOs (A and B) against untransfected reference control in BECs.
DOI: 10.6084/m9.figshare.16621042.v1
title: Additional file 2 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 2. List of CAGE-Seq libraries with corresponding sequencing statistics.
DOI: 10.6084/m9.figshare.16621048.v1
title: Additional file 4 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 4. Common, NCA only, and NCB only differential expressed genes of negative control ASOs against untransfected reference control in BECs.
DOI: 10.6084/m9.figshare.16621048
title: Additional file 4 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 4. Common, NCA only, and NCB only differential expressed genes of negative control ASOs against untransfected reference control in BECs.
DOI: 10.6084/m9.figshare.16621051
title: Additional file 5 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 5. List of primers for qPCR.
DOI: 10.6084/m9.figshare.16621051.v1
title: Additional file 5 of The choice of negative control antisense oligonucleotides dramatically impacts downstream analysis depending on the cellular background

description: Additional file 5. List of primers for qPCR.
DOI: 10.6084/m9.figshare.16621078
title: Figure 3. Pseudo-batches

description: Clusters and pseudo-batches labels to re-create the integrations of Figure 3 from Canek's manuscript.
DOI: 10.6084/m9.figshare.16621078.v1
title: Figure 3. Pseudo-batches

description: Clusters and pseudo-batches labels to re-create the integrations of Figure 3 from Canek's manuscript.
DOI: 10.5281/zenodo.5508397
title: Rutford Ice Stream, Antarctica M_sf tidal velocity components derived from COSMO-SkyMED SAR data

description: This repository provides rasters for velocity components of a tidal (periodic) model for Rutford Ice Stream (RIS), Antarctica. The tidal model consists of a secular (constant) term and a single sinusoidal component corresponding to the M_sf tidal cycle (14.76529 days). The tidal model is fit to time-dependent velocity fields over RIS derived from speckle tracking of COSMO-SkyMed SAR data, collected over 9 months beginning in August 2013. The original methodology and source dataset are described in the publication: Minchew, B. M., Simons, M., Riel, B., & Milillo, P. (2017). Tidally induced variations in vertical and horizontal motion on Rutford Ice Stream, West Antarctica, inferred from remotely sensed observations. <em>Journal of Geophysical Research: Earth Surface</em>, <em>122</em>(1), 167-190. doi: 10.1002/2016JF003971 The rasters are provided in GeoTIFF format in the Polar Stereographic South (EPSG: 3031) coordinate system. The velocity components are also referenced to Polar Stereographic South coordinates. The pixel spacing is 400 meters (in both the X- and Y-directions). The individual files are: vx_secular.tif: secular velocity in X-direction in meters/day. vy_secular.tif: secular velocity in Y-direction in meters/day. vx_amp.tif: M_sf velocity amplitude in X-direction in meters/day. vy_amp.tif: M_sf velocity amplitude in Y-direction in meters/day. vx_phase.tif: M_sf velocity phase delay in X-direction in days. vy_phase.tif: M_sf velocity phase delay in Y-direction in days.
DOI: 10.5281/zenodo.5508311
title: Boesenbergia pandurata as Anti-breast Cancer: Molecular Docking and ADMET Study

description: <em>Boesenbergia pandurata</em> or fingerroot is known to have various pharmacological activities, including anticancer. Extracts from these plants are known to inhibit the growth of cancer cells, including breast cancer. Anti-breast cancer activity is significantly influenced by the inhibition of two receptors: ER-α and HER2. However, it is unknown which metabolites of <em>B. pandurata</em> play the most crucial role in their anticancer activity. This study aimed to determine the metabolites of <em>B. pandurata</em> with the best potential as ER-α and HER2 inhibitors. The method used was molecular docking of several <em>B. pandurata</em> metabolites against ER-α and HER2 receptors, followed by an ADMET study of several metabolites with the best docking results. The docking results showed eight metabolites with the best docking results for the two receptors based on the docking score and ligand-receptor interactions. Of these eight compounds, compounds <strong>11</strong> ((2S)-7,8-dihydro-5-hydroxy-2-methyl-2-(4''-methyl-3''-pentenyl)-8-phenyl-2H,6H-benzo(1,2-b-5,4-b')dipyran-6-one) and <strong>34</strong> (geranyl-2,4-dihydroxy-6-phenethylbenzoate) showed the potential to inhibit both receptors. Both ADMET profiles also show mixed results but still allow for further development. In conclusion, the metabolites of <em>B. pandurata</em> especially compounds <strong>11</strong> and <strong>34</strong>, can be developed as anti-breast cancer through the inhibition of ER-α and HER2.