cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.12633555
title: Methodology for optimal combinations of agroecological practices (AEPs)

description: The assessment framework is developed by first reviewing existing agroecological sustainability assessment tools. Indicators are collected based on literature review. Then they are synthesized into the holistic agroecology assessment framework. New indicators are developed during the project and are also used to address any context-specific data needs or cover gaps of the existing tools.
DOI: 10.5281/zenodo.12099872
title: Node-layer duality in networked systems: multilayer brain networks dataset

description: This dataset contains the processed data used in Presigny, Corsi and De Vico Fallani (2024). It is made available for replication purposes. The code to treat these data is available here.

Multilayer brain networks are obtained from the experimental data published in Guillon et al. (2017). 23 Alzheimer’s diseased (AD) patients and 27 healthy age-matched control (HC) subjects, participated in the study. For each subject, 6 minutes resting-state eyes-closed brain activity was recorded noninvasively using a whole-head MEG system with 102 magnetometers and 204 planar gradiometers (Elekta Neuromag TRIUX MEG system) at a sampling rate of 1000Hz. Signal artefacts were removed using different techniques including removed signal space separation, principal component analysis, and visual inspection. Finally, source-imaging was used to project the signals from the sensor to the source space consisting of N = 70 regions of interest (ROI) defined by the Lausanne cortical atlas parcellation (see file name_of_ROIs.txt for the order). Here, we used spectral bicoherence to estimate functional connectivity between ROIs and between frequencies of brain activity. Specifically, we considered M = 77 layers corresponding to frequencies in the 2 − 40 Hz range with a resolution of 0.5 Hz. Other parameters were non overlapping windows of 2s averaged according to the Welch method. The resulting networks are full-multilayer consisting of both intralayer and interlayer connections, including weighted links between replica nodes.
DOI: 10.5281/zenodo.12099874
title: Node-layer duality in networked systems: multilayer brain networks dataset

description: This dataset contains the processed data used in Presigny, Corsi and De Vico Fallani (2024). It is made available for replication purposes. The code to treat these data is available here.

Multilayer brain networks are obtained from the experimental data published in Guillon et al. (2017). 23 Alzheimer’s diseased (AD) patients and 27 healthy age-matched control (HC) subjects, participated in the study. For each subject, 6 minutes resting-state eyes-closed brain activity was recorded noninvasively using a whole-head MEG system with 102 magnetometers and 204 planar gradiometers (Elekta Neuromag TRIUX MEG system) at a sampling rate of 1000Hz. Signal artefacts were removed using different techniques including removed signal space separation, principal component analysis, and visual inspection. Finally, source-imaging was used to project the signals from the sensor to the source space consisting of N = 70 regions of interest (ROI) defined by the Lausanne cortical atlas parcellation (see file name_of_ROIs.txt for the order). Here, we used spectral bicoherence to estimate functional connectivity between ROIs and between frequencies of brain activity. Specifically, we considered M = 77 layers corresponding to frequencies in the 2 − 40 Hz range with a resolution of 0.5 Hz. Other parameters were non overlapping windows of 2s averaged according to the Welch method. The resulting networks are full-multilayer consisting of both intralayer and interlayer connections, including weighted links between replica nodes.
DOI: 10.15468/dl.t8fna3
title: Occurrence Download

description: A dataset containing 19225089 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Africa, Antarctica, Asia, Oceania, Europe, North America, South America)",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 1984-2024"
 ]
}

 The dataset includes 19225089 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028744-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.12700531
title: Nature-Inspired Recycling of a Protein Mixture into a Green Fluorescent Protein-based hydrogel

description: Dataset for scientific publication entitled Nature-Inspired Recycling of a Protein Mixture into a Green Fluorescent Protein-based hydrogel
DOI: 10.5281/zenodo.12700532
title: Nature-Inspired Recycling of a Protein Mixture into a Green Fluorescent Protein-based hydrogel

description: Dataset for scientific publication entitled Nature-Inspired Recycling of a Protein Mixture into a Green Fluorescent Protein-based hydrogel
DOI: 10.25375/uct.26319028
title: Dataset for Caregiver Burden Article - Grandmothers' subjective stress of caregiving using the Zarit Buden Interview (ZBI)

description: The HIV/AIDS pandemic cut a swathe through young-adult and middle-aged South African generations, leaving behind millions of orphans and vulnerable children. Traditional gendered demands, and high mortality rates among older men, mean that caregiving for those children frequently falls to grandmothers, producing significant strain, increased vulnerability to psychpathology, but also expression of resilience. Extant literature has not measured subjective caregiver burden or distinguished between predictors of that burden quantitatively. We used a mixed methods design to collect quantitative and qualitative data from 57 urban-dwelling grandmothers. Each headed an HIV-affected household and served as primary caregiver for at least one grandchild. Regression modeling identified number of children for whom the participant served as primary caregiver; number of chronically ill household residents; and whether or not the participant received caregiving assistance as predictors of subjective caregiver burden. Open-ended questions revealed trends consistent with that model and suggested that, despite severe resource shortages, grandmothers displayed resilience in, and expressed pride at, fulfilling caregiving responsibilities. This is the first study to measure, using a standardized, well-validated instrument, the subjective burden of caregiving experienced by South African grandmothers heading HIV-affected households. The descriptive data we present support formulation of grounded hypotheses (e.g., how dynamics of household composition affect caregiving experiences; how such experiences might be a source of pride and resilience) that might guide future research.
DOI: 10.25375/uct.26319028.v1
title: Dataset for Caregiver Burden Article - Grandmothers' subjective stress of caregiving using the Zarit Buden Interview (ZBI)

description: The HIV/AIDS pandemic cut a swathe through young-adult and middle-aged South African generations, leaving behind millions of orphans and vulnerable children. Traditional gendered demands, and high mortality rates among older men, mean that caregiving for those children frequently falls to grandmothers, producing significant strain, increased vulnerability to psychpathology, but also expression of resilience. Extant literature has not measured subjective caregiver burden or distinguished between predictors of that burden quantitatively. We used a mixed methods design to collect quantitative and qualitative data from 57 urban-dwelling grandmothers. Each headed an HIV-affected household and served as primary caregiver for at least one grandchild. Regression modeling identified number of children for whom the participant served as primary caregiver; number of chronically ill household residents; and whether or not the participant received caregiving assistance as predictors of subjective caregiver burden. Open-ended questions revealed trends consistent with that model and suggested that, despite severe resource shortages, grandmothers displayed resilience in, and expressed pride at, fulfilling caregiving responsibilities. This is the first study to measure, using a standardized, well-validated instrument, the subjective burden of caregiving experienced by South African grandmothers heading HIV-affected households. The descriptive data we present support formulation of grounded hypotheses (e.g., how dynamics of household composition affect caregiving experiences; how such experiences might be a source of pride and resilience) that might guide future research.
DOI: 10.35003/pshlbk
title: Replication Data for: Siderophile volatile element inventory in lunar magmatic rocks and mantle sources

description: The data set contains concentration data for siderophile volatile (Cu, Se, Ag, S, Te, Cd, In, and Tl) and refractory lithophile elements (Ba and Sm) analyzed by isotope dilution inductively coupled plasma mass spectrometry. We analyzed 10 mare basalts and 10 highland rock samples collected at the Apollo 12, 15, 16, and 17 landing site. All samples were allocated by NASA/JSC and analyzed in the Geochemistry Laboratories at Freie Universität Berlin, Germany.
DOI: 10.25345/c5j09wg4v
title: MassIVE MSV000095369 - optimize of fermentation method of Co-culture Penicillium sp. 34 and Staphylococcus aureus pro analys extract
title: optimize of fermentation method of Co-culture Penicillium sp. 34 and Staphylococcus aureus pro analys extract
DOI: 10.6084/m9.figshare.24875331
title: Early adaptation to the dark. Navigation of cave loaches in mazes

description: Dataset supporting results of navigation of the European cave loach in mazes
DOI: 10.6084/m9.figshare.24875331.v3
title: Early adaptation to the dark. Navigation of cave loaches in mazes

description: Dataset supporting results of navigation of the European cave loach in mazes
DOI: 10.6084/m9.figshare.24875331.v4
title: Early adaptation to the dark. Navigation of cave loaches in mazes

description: Dataset supporting results of navigation of the European cave loach in mazes
DOI: 10.15468/dl.r8ern2
title: Occurrence Download

description: A dataset listing the 9512 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Phylogenomics and the rise of the angiosperms"
 ]
}

 The dataset's 9512 records were derived from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028746-240626123714530/datasets/export for details.
DOI: 10.18150/cvf1vx
title: Biogenic nanosilver bearing antimicrobial and antibiofilm activities and its potential for application in agriculture and industry

description: Title for the dataset:  Biogenic nanosilver bearing antimicrobial and antibiofilm activities and its potential for application in agriculture and industryName/institution/address/email information forPrincipal investigator:Trzcińska-Wencel Joanna, https://orcid.org/0000-0001-9119-0054, Department of Microbiology, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University in Toruń, Toruń, PolandAssociate or co-investigators: Patrycja Golińska https://orcid.org/0000-0001-9154-8191, Magdalena Wypij https://orcid.org/0000-0002-1480-6094 Department of Microbiology, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University in Toruń, Toruń, PolandContact person for questions: Joanna Trzcińska-Wencel (trzcinska@doktorant.umk.pl) Patrycja Golińska (golinska@umk.pl)Date of data collection: 2022-2023, Poland Keywords: silver nanoparticles; mycosynthesis; physicochemical characteristics of nanoparticles; antifungal activity Language information: EnglishInformation about funding: FundingThis research was funded by Excellence Initiative – Research University, Nicolaus Copernicus University in Torun, Grant4NCUStudents (38/2021/Grants4NCUStudents and 02/2021/Grants4NCUStudents). The ACP was funded from EF-IDUB of Nicolaus Copernicus University. Acknowledgment: JT-W acknowledges grant No. 2022/45/N/NZ9/01483 from National Science Centre, Poland.Licence: CC0 - Creative Commons Zero 1.0The deposited data include results obtained in studies on the biosynthesis, characteristics and antifungal activity of silver nanoparticles (AgNPs) from Fusarium culmorum strain JTW1.  Abbreviations: UV-Visible spectroscopy (UV-Vis), Transmission Electron Microscopy (TEM), Energy Dispersive X-ray spectroscopy (EDX), Dynamic Light Scattering (DLS), Fourier Transform Infrared (FTIR) spectroscopy, X-ray diffraction (XRD) and measurement of Zeta potential; silver nanoparticles (Ag), Nanoparticle Tracking analysis (NTA), All methods are described in the article: Trzcińska-Wencel J, Wypij M, Rai M and Golińska P (2023) Biogenic nanosilver bearing antimicrobial and antibiofilm activities and its potential for application in agriculture and industry. Front. Microbiol. 14:1125685. doi: 10.3389/fmicb.2023.1125685 z
DOI: 10.5284/1121024
title: Main Street, Great Casterton, Rutland: Evaluation, Mitigation and Final Assessment

description: null
DOI: 10.15468/dl.fwju4n
title: Occurrence Download

description: A dataset containing 9524 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Phylogenomics and the rise of the angiosperms"
 ]
}

 The dataset includes 9524 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028749-240626123714530/datasets/export for details.
DOI: 10.15468/dl.6n82p7
title: Occurrence Download

description: A dataset containing 9524 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Phylogenomics and the rise of the angiosperms"
 ]
}

 The dataset includes 9524 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028750-240626123714530/datasets/export for details.
DOI: 10.5284/1121025
title: Spoilheap Monograph Series

description: Spoilheap Publications is a joint venture of Archaeology South-East (University College London) and Surrey County Archaeological Unit (Surrey County Council) intended to provide a publication outlet for the results of archaeological investigation and research from across south-east England.
DOI: 10.35003/mwdxme
title: Replication Data for: Mass fractions of siderophile elements, Sm and Ba in lunar low-Ti mare basalts by ID-ICP-MS

description: The data set contains concentration data for highly siderophile (Ir, Ru, Pt, Pd), siderophile volatile (Cu, Se, Ag, S, Te, Cd, In, and Tl) and, for reference, refractory lithophile elements (Ba and Sm) analyzed from the same digestion aliquot by isotope dilution-inductively coupled plasma mass spectrometry, following the methods described in Wang et al. (2015). We analyzed 12 low-Ti mare basalt samples collected at the Apollo 12 and 15 landing sites. Additionally we report highly siderophile element data for samples analyzed in Gleißner et al. (2022) for siderophile volatile elements. All samples were allocated by NASA/JSC and analyzed in the Geochemistry Laboratories at Freie Universität Berlin, Germany. Analysis period: 2019-2022
DOI: 10.35003/l5z2mx
title: Replication Data for: Solar System evolution and terrestrial planet accretion determined by Zr isotopic signatures of meteorites

description: Highlights • We present new Zr isotope data for a comprehensive suite of meteorites. • The NC-CC dichotomy among Solar System materials exists in Zr isotopes. • Isotope variation was likely caused by time-varied infall from the molecular cloud. • Earth & Mars accreted little CC material, precluding a pebble accretion scenario.
DOI: 10.15468/dl.q6cfjc
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vachellia anegadensis (Britton) Seigler & Ebinger, Metastelma anegadense Britton, Pitcairnia jareckii Proctor & Cedeño-Mald.)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 12 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028753-240626123714530/datasets/export for details.
DOI: 10.15468/dl.p4hudx
title: Occurrence Download

description: A dataset containing 1045806 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Belgian IFBL Flora Checklists (1939-1971)"
 ]
}

 The dataset includes 1045806 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028748-240626123714530/datasets/export for details.
DOI: 10.25934/pr00010321
title: Data Challenge: Optimizing AMR Interventions with a Strategic Response Scorecard

description: Background and Objectives:
Countries need actionable evidence to address the imminent crisis of antimicrobial resistance. Our previous work validated the hypothesis that associations between resistance patterns can uncover early warning signals and proposed a scorecard, AMR scorecard that combined baseline and rate of change of resistance to provide a visual, actionable tool for surveillance in Urinary Tract Infections (UTIs) and Blood Stream Infections (BSIs). A critical gap in the AMR scorecard was the lack of gene mutations. Here we propose to leverage the data from the Pfizer Atlas hosted on the Vivli platform to generate:
1. an actionable, multi-dimensional AMR scorecard for country-level trends of resistance to Critical Antibiotics used for UTIs and BSIs.
2. Indicator antibiotics for effective surveillance for AMR against Critical Antibiotics for UTIs and BSIs using a time-series lead-lag analysis.
3. Intercorrelations and leading associations between UTIs and BSIs presenting in in-patient and out-patient locations. 
4. Mining genomic patterns for emerging trends in cross-resistant organisms in UTIs and BSIs.
Methods and Statistical Analysis:
The surveillance data will be aggregated yearly to generate resistance time series. Univariate and multivariate time series analyses will uncover temporal trends and associations.  Lead-lag analyses will identify early indicators of emerging resistance and to uncover associations between in-patient and out-patient locations. Cluster robust trends will be used to develop a multidimensional AMR scorecard with baseline, rate of change overlaid on gene background.
Outcomes:
Our research aims to enhance AMR surveillance with a digital tool for targeted interventions. Leveraging the Vivli datasets, we will develop 
1. a multi-dimensional AMR Scorecard that integrates genomic data with traditional resistance patterns,
2. uncovering indicator antibiotics and providing actionable intelligence for healthcare providers. 
3. Understanding the dynamics of resistance spread from in-patient to out-patient and vice versa
4. Genomic surveillance features to tackle emerging resistance
DOI: 10.5281/zenodo.12771764
title: Table S1. The compilation of virulence factors identified in hospital wound samples. Virulence factors in strains identified based on individual contigs and associated genes
DOI: 10.5281/zenodo.12771765
title: Table S1. The compilation of virulence factors identified in hospital wound samples. Virulence factors in strains identified based on individual contigs and associated genes
DOI: 10.15468/dl.eygtnn
title: Occurrence Download

description: A dataset containing 728049 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Betula pendula Roth"
 ]
}

 The dataset includes 728049 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028745-240626123714530/datasets/export for details.
DOI: 10.15468/dl.x3jhw9
title: Occurrence Download

description: A dataset containing 609 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Africa",
 "Country is South Africa",
 "Geometry POLYGON((28.05799 -26.14179,28.06779 -26.14179,28.06779 -26.13575,28.05799 -26.13575,28.05799 -26.14179))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia",
 "Year 2019-2024"
 ]
}

 The dataset includes 609 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028755-240626123714530/datasets/export for details.
DOI: 10.17031/668cf4f191933
title: 2015 Bunker, F. Sound of Barra Grateloupia turuturu sighting

description: An ad-hoc sighting of the non-native seaweed Grateloupia turuturu reported on Twitter
description: Part of MSFD NNS baseline data collation project (Jan 2016). Subset of a dataset as we were only pulling out records for a selection of INNS. Contains records for Grateloupia turuturu.
DOI: 10.15468/dl.gvq8np
title: Occurrence Download

description: A dataset containing 12106146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (June, February, October)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 12106146 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028751-240626123714530/datasets/export for details.
DOI: 10.15468/dl.qka2fa
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Xeno-canto - Bird sounds from around the world",
 "TaxonKey is Ara ararauna (Linnaeus, 1758)"
 ]
}

 The dataset includes 146 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028757-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.23954906
title: Clawed left ventricular doppler

description: Clawed left ventricular doppler
DOI: 10.6084/m9.figshare.23954906.v1
title: Clawed left ventricular doppler

description: Clawed left ventricular doppler
DOI: 10.15468/dl.9cpbcc
title: Occurrence Download

description: A dataset containing 609 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is South Africa",
 "Geometry POLYGON((28.05756 -26.14228,28.06874 -26.14228,28.06874 -26.13557,28.05756 -26.13557,28.05756 -26.14228))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia",
 "Year 2019-2024"
 ]
}

 The dataset includes 609 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028758-240626123714530/datasets/export for details.
DOI: 10.15468/dl.2v222j
title: Occurrence Download

description: A dataset containing 745924 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (June, February, October)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 745924 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028752-240626123714530/datasets/export for details.
DOI: 10.15468/dl.yy23m7
title: Occurrence Download

description: A dataset containing 5182883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (June, February, October)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 5182883 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028754-240626123714530/datasets/export for details.
DOI: 10.15468/dl.ebqbth
title: Occurrence Download

description: A dataset containing 56593 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boletus edulis Bull."
 ]
}

 The dataset includes 56593 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028760-240626123714530/datasets/export for details.