cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/2s1-8t9-1mz
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fjn-nw2-aek
title: Phacops

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h2e-bt1-nrm
title: Chondrichthyes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/59e-qa1-h35
title: Isurus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6la-cje-xgn
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dqc-7ca-yxa
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/der-ye7-7a9
title: †Trachyphyllia constricta (Brüggeman, 1877)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fdt-lgr-n4f
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4bd-ldp-gmz
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zle-1nh-wyv
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r1s-xt4-jsv
title: Pholadomya G. B. Sowerby I, 1823

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rmd-a2l-e0a
title: Arca Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bwj-daj-hzk
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vvg-vl0-m83
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/607-p0e-exa
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lf2-cc0-nf9
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k9b-gdz-2hl
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/laj-a8n-767
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n65-xjf-63g
title: †Discocyclina Gümbel, 1870

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ex6-3mx-tr6
title: Hexanchidae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zkq-3nk-2z5
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/77t-f08-jm5
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cvt-fsg-pwl
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/95n-7nc-wg4
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r2q-6pg-zq9
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zg6-tgl-fhc
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zs4-ysn-7yq
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j0x-4hk-78e
title: Elephas Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/btl-qwc-sjt
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nrk-csw-s6z
title: †Gryphaea Lamarck, 1801

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/seb-1st-qk6
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/swf-25f-awx
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2zr-k88-xzg
title: Muscardinus Kaup, 1829

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/abk-104-0gs
title: Montipora Blainville, 1830

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/60w-pz7-aqq
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/neq-b4f-je7
title: Pholadomya G. B. Sowerby I, 1823

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dbe-n5y-qll
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/reb-78r-wb7
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mnm-6mg-xzl
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pf8-j4r-js2
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b4q-md7-baa
title: Nuculidae J. E. Gray, 1824

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nw8-0pg-8xf
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rza-w6c-tha
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ag2-zm9-v39
title: Chondrichthyes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tee-eph-zcv
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e99-hcv-56j
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.r4nmky
title: Occurrence Download

description: A dataset containing 2550668 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tringa totanus"
 ]
}

 The dataset includes 2550668 records from 1350 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013945-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tkreqm
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Netherlands",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pontederia crassipes Mart.",
 "Year 1985-2025"
 ]
}

 The dataset includes 90 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015866-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13138447
title: Global Invasive and Alien Traits and Records (GIATAR) dataset

description: Please use V2 (and beyond) of this dataset, as this version is missing the occurrence files.
DOI: 10.5281/zenodo.13139672
title: Global Invasive and Alien Traits and Records (GIATAR) dataset

description: Monitoring and managing the global spread of invasive and alien species requires accurate spatiotemporal records of species presence and information about the biological characteristics of species of interest including life cycle information, biotic and abiotic constraints and pathways of spread. The Global Invasive and Alien Traits And Records (GIATAR) dataset provides consolidated dated records of invasive and alien presence at the country-scale combined with a suite of biological information about pests of interest in a standardized, machine-readable format. We provide dated presence records for 46,666 alien taxa in 249 countries constituting 827,300 country-taxon pairs, joined with additional biological information for thousands of taxa. GIATAR is designed to be quickly updateable with future data and easy to integrate into ongoing research on global patterns of alien species movement using scripts provided to query and analyze data. 

This publication includes:



GIATAR dataset files (dataset)

Functions in Python and R to join tables and query data (query_functions)

Tutorials and example queries in Python and R (tutorials)


For more information, please refer to the publication:



Saffer, Ariel, Thom Worm, Yu Takeuchi, and Ross Meentemeyer. “GIATAR: A Spatio-Temporal Dataset of Global Invasive and Alien Species and Their Traits.” Scientific Data 11, no. 1 (September 11, 2024): 991. https://doi.org/10.1038/s41597-024-03824-w.

 

For updates to code, please refer to our Github repository: https://github.com/ncsu-landscape-dynamics/GIATAR-dataset
DOI: 10.5281/zenodo.15042321
title: Global Invasive and Alien Traits and Records (GIATAR) dataset

description: Monitoring and managing the global spread of invasive and alien species requires accurate spatiotemporal records of species presence and information about the biological characteristics of species of interest including life cycle information, biotic and abiotic constraints and pathways of spread. The Global Invasive and Alien Traits And Records (GIATAR) dataset provides consolidated dated records of invasive and alien presence at the country-scale combined with a suite of biological information about pests of interest in a standardized, machine-readable format. We provide dated presence records for 46,666 alien taxa in 249 countries constituting 827,300 country-taxon pairs, joined with additional biological information for thousands of taxa. GIATAR is designed to be quickly updateable with future data and easy to integrate into ongoing research on global patterns of alien species movement using scripts provided to query and analyze data. 

This publication includes:



GIATAR dataset files (dataset)

Functions in Python and R to join tables and query data (query_functions)

Tutorials and example queries in Python and R (tutorials)


For more information, please refer to the publication:



Saffer, Ariel, Thom Worm, Yu Takeuchi, and Ross Meentemeyer. “GIATAR: A Spatio-Temporal Dataset of Global Invasive and Alien Species and Their Traits.” Scientific Data 11, no. 1 (September 11, 2024): 991. https://doi.org/10.1038/s41597-024-03824-w.

 

Changes in this version (March 19, 2025):





Removed base folder from folder structure

Included additional files used to update the database

Latest records as of March 9 - 10, 2025

Updated species list from EPPO as of February 26, 2025 



For continuous updates to code, please refer to our Github repository: https://github.com/ncsu-landscape-dynamics/GIATAR-dataset
DOI: 10.5281/zenodo.15498757
title: Global Invasive and Alien Traits and Records (GIATAR) dataset

description: Monitoring and managing the global spread of invasive and alien species requires accurate spatiotemporal records of species presence and information about the biological characteristics of species of interest including life cycle information, biotic and abiotic constraints and pathways of spread. The Global Invasive and Alien Traits And Records (GIATAR) dataset provides consolidated dated records of invasive and alien presence at the country-scale combined with a suite of biological information about pests of interest in a standardized, machine-readable format. We provide dated presence records for 46,666 alien taxa in 249 countries constituting 827,300 country-taxon pairs, joined with additional biological information for thousands of taxa. GIATAR is designed to be quickly updateable with future data and easy to integrate into ongoing research on global patterns of alien species movement using scripts provided to query and analyze data. 

This publication includes:



GIATAR dataset files (dataset)

Functions in Python and R to join tables and query data (query_functions)

Tutorials and example queries in Python and R (tutorials)


For more information, please refer to the publication:



Saffer, Ariel, Thom Worm, Yu Takeuchi, and Ross Meentemeyer. “GIATAR: A Spatio-Temporal Dataset of Global Invasive and Alien Species and Their Traits.” Scientific Data 11, no. 1 (September 11, 2024): 991. https://doi.org/10.1038/s41597-024-03824-w.

 

Changes in this version (May 23, 2025):





Latest records as of May 14, 2025



For continuous updates to code, please refer to our Github repository: https://github.com/ncsu-landscape-dynamics/GIATAR-dataset
DOI: 10.25934/pr00011115.1
title: Available datapackage for study 'Vivli Test Study 1 - do not request - has data pre-loaded'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5281/zenodo.5866874
title: Interacciones de invertebrados marinos de los Bajos del Norte y Parque Nacional Arrecife Alacranes: Expediciones OCEANA 2021

description: Esp: Este conjunto de datos contiene información sobre las interacciones biológicas registradas durante la expedición realizada en los arrecifes Bajos del Norte, Banco de Campeche, Golfo de México, en agosto de 2021 por OCEANA México.


Eng: This data set contains information on the biological interactions recorded during the expedition carried out in the Bajos del Norte reefs, Banco de Campeche, Gulf of Mexico, in August 2021 by OCEANA Mexico
DOI: 10.5281/zenodo.5866875
title: Interacciones de invertebrados marinos de los Bajos del Norte y Parque Nacional Arrecife Alacranes: Expediciones OCEANA 2021

description: Esp: Este conjunto de datos contiene información sobre las interacciones biológicas registradas durante la expedición realizada en los arrecifes Bajos del Norte, Banco de Campeche, Golfo de México, en agosto de 2021 por OCEANA México.


Eng: This data set contains information on the biological interactions recorded during the expedition carried out in the Bajos del Norte reefs, Banco de Campeche, Gulf of Mexico, in August 2021 by OCEANA Mexico
DOI: 10.15468/dl.zu2xvt
title: Occurrence Download

description: A dataset containing 921 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Herbarium of the University of Coimbra (COI)",
 "Country is Croatia"
 ]
}

 The dataset includes 921 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015870-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p14mk5jl
title: Drought Time Series Based on the Standardized Precipitation Index for Guam from 1954 to 2022 and Koror from 1952 to 2019

description: This dataset contains an input of calculated average monthly rainfall values for Guam and drought time series data that covers two islands. The Guam drought time series is based on the standardized precipitation index (SPI) three-month intervals (SPI-3) and twelve-month intervals (SPI-12). Calculated from monthly rainfall values from 1954 through 2020 were produced for the whole land area of Guam from gridded monthly rainfall maps, which were developed using historical daily rainfall data and climatologically aided interpolation (CAI) methods similar to those described in Longman et al. (2019). The Koror drought time series is based on the standardized precipitation index (SPI) three-month intervals (SPI-3) and twelve-month intervals (SPI-12). Daily rainfall values from 1952 through 2019 collected at the Palau Weather Service Office in Koror.
DOI: 10.25824/redu/oathlg
title: Influência das características de um aparelho de raios X portátil na qualidade de imagem, diagnóstico e dose para o operador

description: Os dados depositados correspondem aos valores de cinza que representam o brilho, ruído, uniformidade e contraste de radiografias obtidas com o aparelho de raios X portátil Eagle X-Ray (Dabi Atlante, Brasil). Esses valores foram comparados aos das radiografias obtidas com o aparelho de raios X fixo Focus (Instrumentarium Dental, Tuusula, Finlândia, EUA). As radiografias foram obtidas utilizando diferentes sistemas digitais, incluindo placas de fósforo fotoestimulável dos sistemas Express (Instrumentarium Dental, Finlândia) e VistaScan Mini Easy (Dürr Dental, Alemanha) e dois semicondutores de óxido de metal complementar, sendo eles os sistemas Snapshot (Instrumentarium Dental, Finlândia) e Digora Toto (Soredex, Finlândia). Além disso, as radiografias foram obtidas com variações nos tempos de exposição, níveis de carga da bateria e duas condições distintas de compensação automática de exposição. Por fim, os dados também incluem métricas de diagnóstico (AUC, sensibilidade e especificidade) relacionadas à detecção de lesões de cárie proximal, avaliadas a partir das radiografias obtidas com ambos os aparelhos de raios X (portátil e fixo).
DOI: 10.15468/dl.str6rt
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Happywhale - Common bottlenose dolphin in North Atlantic Ocean",
 "Country is Croatia"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015869-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.akfgac
title: Occurrence Download

description: A dataset containing 335 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-106.81875 25.19221,-99.3612 23.59685,-100.61311 28.08389,-107.48093 30.34558,-106.81875 25.19221))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sylvilagus floridanus (J.A.Allen, 1890)"
 ]
}

 The dataset includes 335 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015871-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.utcxbd
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The reptiles and amphibians collection (RA) of the Muséum national d'Histoire Naturelle (MNHN - Paris)",
 "Country is Croatia"
 ]
}

 The dataset includes 84 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015868-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kxtv6q
title: Occurrence Download

description: A dataset containing 195377 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Portulaca L."
 ]
}

 The dataset includes 195377 records from 1731 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015867-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ktk9ry
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Birdsfoot trefoil enamovirus 1"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011110-250711103210423/datasets/export for details.
DOI: 10.15468/dl.2emwku
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAE5325"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011112-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x3u5mu
title: Occurrence Download

description: A dataset containing 5056 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Viola primulifolia L."
 ]
}

 The dataset includes 5056 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0268921-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fbw25a
title: Occurrence Download

description: A dataset containing 24509 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "Country is Norway",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lynx lynx (Linnaeus, 1758)"
 ]
}

 The dataset includes 24509 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0267521-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zd52eq
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helictotrichon tibeticum (Roshev.) Keng f.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 115 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0264415-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9vts9e
title: Occurrence Download

description: A dataset containing 4311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-10.97349 35.45476,7.80535 35.45476,7.80535 44.35586,-10.97349 44.35586,-10.97349 35.45476))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Senecio angulatus L.fil."
 ]
}

 The dataset includes 4311 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0267523-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.