cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17361388
title: Replication Package for "Beyond the YAML File: Understanding Real-World GitHub Actions Workflow Adoption" (submitted to EASE 2026)

description: This repository contains the replication package for the study "Beyond the YAML File: Understanding Real-World GitHub Actions Workflow Adoption" submitted to EASE 2026 conference. It provides the code, data artifacts, and instructions necessary to reproduce and access the quantitative and qualitative analyses from the paper.

Repository structure

- data-pipelines-and-analysis/  - data_pipeline/: End-to-end data collection, storage, and analysis pipeline.    - collect_data.py: Entry point to collect data from the GitHub API.    - config/: Configuration (API tokens, runtime options).    - crawlers/: Modular crawlers for repositories, commits, pull requests, workflow runs, and jobs.    - database/: DB connection and ORM-like models used during collection.    - persistence/: Storage interfaces and stores.    - data/: Lightweight helpers and logs for local data handling.    - analysis/: Reproduction scripts for figures, tables, and statistics used in the paper. Includes figures/ and intermediate data/ CSVs used by scripts.    - services/ and scripts/: Utilities and checks (e.g., data quality scripts).    - README.md: Detailed setup, configuration, and execution steps for the pipeline and analyses.  - manual_and_qualitative/: CSVs and notes for manual and qualitative analysis (e.g., RQ1). See its README.md for details and suggested usage.

Quick start

Reproducing the pipeline and analysis:

1. Navigate to data-pipelines-and-analysis/data_pipeline/.2. Create and activate a virtual environment.3. Install requirements: pip install -r requirements.txt4. Follow the instructions in data-pipelines-and-analysis/data_pipeline/README.md to configure credentials, run data collection, and execute analysis scripts in analysis/.

For qualitative artifacts and manual coding resources, see data-pipelines-and-analysis/manual_and_qualitative/README.md.

Reproducing figures and tables

The analysis/ folder inside data_pipeline/ contains scripts that generate the figures and summary tables used in the paper. Many scripts read from analysis/data/ and write outputs to analysis/figures/. Refer to each script's docstring and the data_pipeline/README.md.
DOI: 10.5281/zenodo.18258125
title: 12-the-library-of-forgotten-things : interiors : arabic
DOI: 10.5281/zenodo.18258126
title: 12-the-library-of-forgotten-things : interiors : arabic
DOI: 10.5281/zenodo.18258131
title: Criscia Katinas. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:45
DOI: 10.5281/zenodo.18258130
title: Criscia Katinas. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:45
DOI: 10.17026/ar/nlktq8
title: Quickscan Herinrichting Hoge Hondstraat
title: project 838, advies 1308

description: De locatie kent grotendeels een hoge archeologische verwachting gezien de ligging op een laatglaciaal en/of vroegholoceen duincomplex (archeologische beleidswaarde 3). Dit terreintype lag in de prehistorie al wat hoger dan het omliggende gebied, waardoor het een goede plek was om te wonen. Op dekzandduinen worden vooral bewoningssporen uit de prehistorie en de Romeinse tijd en vroege middeleeuwen (erven en grafvelden) verwacht. Een zone in het noordoosten van het plangebied is in het verleden al afgegraven en dit gebied heeft daardoor geen archeologische verwachting meer (beleidswaarde 0). Bij realisatie van de plannen wordt in ieder geval meer dan 500 m2 dieper dan 50 cm verstoord en daarmee wordt zowel de vrijstellingsgrens (200 m2) als de onderzoeksgrens (500 m2) van beleidswaarde 3 overschreden. Dit betekent dat hier archeologisch vervolgonderzoek noodzakelijk is.
DOI: 10.6084/m9.figshare.30171217
title: Data for Article_2025_01_20250920

description: Data for Article_2025_01_20250920
DOI: 10.6084/m9.figshare.30171217.v1
title: Data for Article_2025_01_20250920

description: Data for Article_2025_01_20250920
DOI: 10.6084/m9.figshare.30171217.v2
title: Data for Article_2025_01_20250920

description: Data for Article_2025_01_20250920
DOI: 10.17026/ar/arz1ox
title: Dataset van archeologisch bureauonderzoek en booronderzoek: Nijnsel Huisakkerweg 20-20a te Sint-Oedenrode (gemeente Meierijstad).

description: Bureau voor Archeologie heeft een bureauonderzoek en verkennend booronderzoek
uitgevoerd voor bouwwerkzaamheden aan de Nijnsel Huisakkerweg 20-20a te Sint-
Oedenrode.
DOI: 10.15468/dl.3szpj4
title: Occurrence Download

description: A dataset containing 90016 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limosa limosa",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 },
 "Country is Sweden",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 90016 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012010-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18257999
title: Dataset Mapping Marketization Elements in Mental Health Content on TikTok: A Content and Discourse Analysis

description: Dataset for Mapping Marketization Elements in Mental Health Content on Tiktok - Multimodal Critical Discourse Analysis (MCDA)
DOI: 10.5281/zenodo.18257998
title: Dataset Mapping Marketization Elements in Mental Health Content on TikTok: A Content and Discourse Analysis

description: Dataset for Mapping Marketization Elements in Mental Health Content on Tiktok - Multimodal Critical Discourse Analysis (MCDA)
DOI: 10.5281/zenodo.18258143
title: Criscia stricta (Spreng.) Katinas. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:45
DOI: 10.5281/zenodo.18258144
title: Criscia stricta (Spreng.) Katinas. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:45
DOI: 10.15468/dl.q9g9zj
title: Occurrence Download

description: A dataset listing the 4582 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "Issue" : [
 "is one of (Coordinate precision invalid, Coordinate uncertainty meters invalid)"
 ]
 }
 },
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "DistanceFromCentroidInMeters is greater than or equal to 2000",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is 2025",
 "GadmGid is one of (AUT.5.3_2, AUT.6.4_2)"
 ]
}

 The dataset's 4582 records were derived from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012035-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evwe8m
title: Occurrence Download

description: A dataset containing 759781 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spatula querquedula"
 ]
}

 The dataset includes 759781 records from 1160 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012001-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.35097/j1kagextt3pcq6gg
title: DAMAST-KIT-1: Geophysical Borehole Logging Data

description: The repository contains a general description of borehole location and logging information, the raw data file in WellCAD-Format and a pdf of the logging data.
DOI: 10.3535/4d1-ph3-nzv
title: Muntiacus muntjak (Zimmermann, 1780)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h6d-khx-wzc
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yk3-pql-13r
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fgh-08e-987
title: Lepidophyllum Cass.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pve-9rx-xkd
title: Voacanga Thouars

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lx5-ez2-nll
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y4y-4xz-v13
title: Capricornis sumatraensis (Bechstein, 1799)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mcf-jwl-9e7
title: Rhinoceros Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pqm-b39-gwx
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qeq-49j-77x
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/74b-04d-lkp
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jxn-a3j-f9e
title: Martes flavigula (Boddaert, 1785)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gn4-p2v-63t
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fhv-tb4-gw7
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lqw-mft-4qs
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rbe-lyj-n26
title: Phyllolepidum Trinajstic

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/42b-czg-zf8
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l0b-4d8-hsl
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hdq-rct-ceg
title: Rusa C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lz2-dr7-bv3
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sa5-f2c-crh
title: Pongo pygmaeus (Linnaeus, 1760)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w7c-e6m-taf
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/alx-fve-782
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d56-mp5-j44
title: Maianthemum F.H.Wigg.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1jg-2fc-l66
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2nv-xcr-g5d
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sh7-3b0-z93
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5zn-dex-z28
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/abc-pjk-d5b
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vcj-17d-hj0
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ym8-jma-47s
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mbj-ycd-ynl
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/679-1ck-sgs
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lz7-asx-r52
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6sv-ymn-zrm
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ce5-aw2-572
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x2s-1mm-0nk
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9wj-68j-fst
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wxg-y6c-ejw
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/19z-1bg-37z
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1ld-25n-1sx
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.vzkze6
title: Occurrence Download

description: A dataset containing 918 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is LAGPLON Système d'information de la biodiversité marine des récifs et lagons - Collection des données de biodiversité marine de Polynésie française (LAGPLON)"
 ]
}

 The dataset includes 918 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000581-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p5b7xm
title: Occurrence Download

description: A dataset containing 595807 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is eButterfly Surveys"
 ]
}

 The dataset includes 595807 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000576-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/5246
title: luganda-english-parallel-corpus
DOI: 10.15468/dl.p2yj52
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is BRA.13_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sus scrofa Linnaeus, 1758"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000582-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17633065
title: Questionnaire about the Impact of the work environment on the productivity and mental health of employees of Peruvian MYPEs
DOI: 10.15468/dl.8hv4rw
title: Occurrence Download

description: A dataset containing 11613830 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 11613830 records from 5451 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039538-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cvsu6q
title: Occurrence Download

description: A dataset containing 5105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Felidae",
 "Year 2015-2025"
 ]
}

 The dataset includes 5105 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006272-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29176838
title: Additional file 1 of Tracheal, bronchus, and lung cancer among older adults: thirty-year global burden trends, precision medicine breakthroughs, and lingering barriers

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.29176838.v1
title: Additional file 1 of Tracheal, bronchus, and lung cancer among older adults: thirty-year global burden trends, precision medicine breakthroughs, and lingering barriers

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.29176844
title: Additional file 1 of Woronin body protein UvHex1 is essential for pathogenesis, and contributes to conidiation, cell stress response, lipid metabolism, and mycotoxins production in rice false smut fungus Ustilaginoidea virens

description: Additional file 1: Table S1. Primers used in this study.
DOI: 10.6084/m9.figshare.29176844.v1
title: Additional file 1 of Woronin body protein UvHex1 is essential for pathogenesis, and contributes to conidiation, cell stress response, lipid metabolism, and mycotoxins production in rice false smut fungus Ustilaginoidea virens

description: Additional file 1: Table S1. Primers used in this study.
DOI: 10.15468/dl.sa8et3
title: Occurrence Download

description: A dataset containing 53495 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lampropholis Fitzinger, 1843",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "Year is greater than or equal to 1975"
 ]
}

 The dataset includes 53495 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006269-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25935/hegh-1r24
title: Wind/Waves/RAD1 LESIA L3 DF Dataset

description: The data collection contains daily Level 3 goniopolarimetric CDF files, derived from the RAD1 Receiver of Wind/Waves dataset. This data collection has been produced following the goniopolarimetric Inversion described in X.Bonnin, S.Hoang and B.Cecconi (2022).
DOI: 10.5281/zenodo.15029989
title: R2Vul - Data and Models

description: This Zenodo repository contains the datasets and models for our paper "R2Vul: Learning to Reason about Software Vulnerabilities with Reinforcement Learning and Structured Reasoning Distillation". 

1. Datasets

raw_dataset.json - the raw dataset mined from NVD.

r2vul_dataset.zip - the dataset used for fine-tuning and testing.

realworld_dedup.zip - the external, manually annotated Java dataset (RQ2).

2. Models and Checkpoints

cls.zip - includes all models checkpoints fine-tuned using CLS.

sft.zip - includes all models checkpoints fine-tuned using SFT.

orpo.zip - includes all models checkpoints fine-tuned using ORPO (R2Vul).

MSIVD.zip - downloaded from https://zenodo.org/records/11403208 (codellama-13b - bigvul_expl).

VulLLM.zip - downloaded from https://zenodo.org/records/10677069 (codellama-13b-multi-r16-2048).
DOI: 10.5281/zenodo.15552613
title: R2Vul - Data and Models

description: This Zenodo repository contains the datasets and models for our paper "R2Vul: Learning to Reason about Software Vulnerabilities with Reinforcement Learning and Structured Reasoning Distillation". 

1. Codebase

r2vul_code.zip - contains the codebase with instructions to replicate all experiments. It is also available here: https://anonymous.4open.science/r/R2Vul-44C0/

2. Datasets

raw_dataset.json - the raw dataset mined from NVD.

r2vul_dataset.zip - the dataset used for fine-tuning and testing.

realworld_dedup.zip - the external, manually annotated Java dataset (RQ2).

3. Models and Checkpoints

cls.zip - includes all models checkpoints fine-tuned using CLS.

sft.zip - includes all models checkpoints fine-tuned using SFT.

orpo.zip - includes all models checkpoints fine-tuned using ORPO (R2Vul).

MSIVD.zip - downloaded from https://zenodo.org/records/11403208 (codellama-13b - bigvul_expl).

VulLLM.zip - downloaded from https://zenodo.org/records/10677069 (codellama-13b-multi-r16-2048).
DOI: 10.5281/zenodo.14988143
title: Synthetic Datasets of different Packaging Strategies from an Order Management Process with Sustainability Indicators

description: General Description

This repository contains synthetic datasets generated using Discrete-Event Simulation (DES), henceforth referred to as simulation. We considered a process of customer order management [1] used in our previous works, thus using the knowledge extracted from the extensive analysis already done on the data and the identification of the constraints from the process side that affect the business and vice versa. 

Process Description

This process covers registration, payment, packing, and shipping of orders, involving staff from sales, warehousing, and shipment departments. Customers place orders, which are assigned to a particular salesperson for registration and payment processing. A warehouser checks items' stock, reorders if needed, and prepares items for shipment. Packages are created by the warehouser and sent by him and a shipper, but frequently there are policy deviations in loading assistance, which are sent by the shipper himself or with another shipper. Deliveries may fail repeatedly until succeeding. This process model includes six object types: Customer, Order, Item, Product, Package, and Employee; and 11 activities (event types): place order, confirm order, payment reminder, pay order, item out of stock, reorder item, pick item, create package, send package, failed delivery, and package delivered.

Simulation Scenarios

To demonstrate how sustainable business practices can be evaluated by integrating indicators from diverse perspectives (aligned with Industry 5.0) through simulation, we choose to assess the impact of the packaging policies by simulating two distinct packaging strategies:



Scenario 1: Each order is packaged individually, meaning that a package contains only items from a single order.

Scenario 2: Orders from the same customer are consolidated into a single package whenever possible, with a waiting period of up to five days to aggregate multiple orders before shipping.


Simulation Tool

Simulation carried out using SIMIO version 18.269.42091 to replicate the order management process and apply the two packaging scenarios.