cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7041065
title: Additional file 2: of A new bovine tuberculosis model for England and Wales (BoTMEW) to simulate epidemiology, surveillance and control

description: A spreadsheet file with outputs from a recent run of the anonymised model with observed numbers of OTFW breakdowns in 2016 as displayed in Fig. 4. (ODS 1143 kb)
DOI: 10.6084/m9.figshare.7041065.v1
title: Additional file 2: of A new bovine tuberculosis model for England and Wales (BoTMEW) to simulate epidemiology, surveillance and control

description: A spreadsheet file with outputs from a recent run of the anonymised model with observed numbers of OTFW breakdowns in 2016 as displayed in Fig. 4. (ODS 1143 kb)
DOI: 10.6084/m9.figshare.7041041
title: Additional file 6: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S6. Candidate drug targets of genes with SNVs in the lung tumor. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.7041041.v1
title: Additional file 6: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S6. Candidate drug targets of genes with SNVs in the lung tumor. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.7041032
title: Additional file 5: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S5. Single nucleotide variants shared between and unique to the three tumors. (XLSX 149 kb)
DOI: 10.6084/m9.figshare.7041032.v1
title: Additional file 5: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S5. Single nucleotide variants shared between and unique to the three tumors. (XLSX 149 kb)
DOI: 10.6084/m9.figshare.7041017
title: Additional file 4: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S4. Single nucleotide variants detected in peripheral blood. (CSV 13764 kb)
DOI: 10.6084/m9.figshare.7041017.v1
title: Additional file 4: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S4. Single nucleotide variants detected in peripheral blood. (CSV 13764 kb)
DOI: 10.6084/m9.figshare.7041002
title: Additional file 3: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S3. Single nucleotide variants detected in lung metastasis. (CSV 13575 kb)
DOI: 10.6084/m9.figshare.7041002.v1
title: Additional file 3: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S3. Single nucleotide variants detected in lung metastasis. (CSV 13575 kb)
DOI: 10.6084/m9.figshare.7040996
title: Additional file 2: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S2. Single nucleotide variants detected in upper urinary tract tumor. (CSV 13751 kb)
DOI: 10.6084/m9.figshare.7040996.v1
title: Additional file 2: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S2. Single nucleotide variants detected in upper urinary tract tumor. (CSV 13751 kb)
DOI: 10.6084/m9.figshare.7040987
title: Additional file 1: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S1. Single nucleotide variants detected in primary bladder tumor. (CSV 13537 kb)
DOI: 10.6084/m9.figshare.7040987.v1
title: Additional file 1: of Genomic case report of a low grade bladder tumor metastasis to lung

description: Table S1. Single nucleotide variants detected in primary bladder tumor. (CSV 13537 kb)
DOI: 10.6084/m9.figshare.7040981
title: MOESM2 of Fecal microbiota and bile acid interactions with systemic and adipose tissue metabolism in diet-induced weight loss of obese postmenopausal women

description: Additional file 2. Pairwise correlation tables. Table S1. Plasma metabolomic-fecal microbiota correlations. Table S2. Fecal bile acid-fecal microbiota correlations. Table S3. Plasma metabolomic-fecal bile acid correlations. Table S4. Fecal bile acid-adipose transcriptomic pathway correlations. Table S5. Fecal microbiota-adipose transcriptomic pathway correlations.
DOI: 10.6084/m9.figshare.7040981.v1
title: MOESM2 of Fecal microbiota and bile acid interactions with systemic and adipose tissue metabolism in diet-induced weight loss of obese postmenopausal women

description: Additional file 2. Pairwise correlation tables. Table S1. Plasma metabolomic-fecal microbiota correlations. Table S2. Fecal bile acid-fecal microbiota correlations. Table S3. Plasma metabolomic-fecal bile acid correlations. Table S4. Fecal bile acid-adipose transcriptomic pathway correlations. Table S5. Fecal microbiota-adipose transcriptomic pathway correlations.
DOI: 10.6084/m9.figshare.7040783
title: Additional file 8 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of coding regions of inactive genes. This compressed file (.tar.gz) includes HebbPlots of genes inactive in 57 tissues/cell types. (TAR 2715 kb)
DOI: 10.6084/m9.figshare.7040780
title: Additional file 7 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of coding regions of active genes. This compressed file (.tar.gz) includes HebbPlots of genes active in 57 tissues/cell types. (TAR 2696 kb)
DOI: 10.6084/m9.figshare.7040783.v1
title: Additional file 8 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of coding regions of inactive genes. This compressed file (.tar.gz) includes HebbPlots of genes inactive in 57 tissues/cell types. (TAR 2715 kb)
DOI: 10.6084/m9.figshare.7040780.v1
title: Additional file 7 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of coding regions of active genes. This compressed file (.tar.gz) includes HebbPlots of genes active in 57 tissues/cell types. (TAR 2696 kb)
DOI: 10.6084/m9.figshare.7040774
title: Additional file 1: of Effect of astragaloside IV on indoxyl sulfate-induced kidney injury in mice via attenuation of oxidative stress

description: Raw Data. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.7040774.v1
title: Additional file 1: of Effect of astragaloside IV on indoxyl sulfate-induced kidney injury in mice via attenuation of oxidative stress

description: Raw Data. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.7040765
title: Additional file 6 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: Gene identifiers. This compressed file (.tar.gz) includes identifiers of nine groups of genes divided according to their gene expression levels in IMR90. (TAR 428 kb)
DOI: 10.6084/m9.figshare.7040765.v1
title: Additional file 6 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: Gene identifiers. This compressed file (.tar.gz) includes identifiers of nine groups of genes divided according to their gene expression levels in IMR90. (TAR 428 kb)
DOI: 10.6084/m9.figshare.7040747
title: Additional file 5 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of active enhancers. This compressed file (.tar.gz) includes HebbPlots of enhancers active in eight tissues/cell types. (TAR 439 kb)
DOI: 10.6084/m9.figshare.7040747.v1
title: Additional file 5 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of active enhancers. This compressed file (.tar.gz) includes HebbPlots of enhancers active in eight tissues/cell types. (TAR 439 kb)
DOI: 10.6084/m9.figshare.7040738
title: Additional file 4 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of low-CpG promoters. This compressed file (.tar.gz) includes HebbPlots of low-CpG promoters active in 57 tissues/cell types. (TAR 2971 kb)
DOI: 10.6084/m9.figshare.7040738.v1
title: Additional file 4 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of low-CpG promoters. This compressed file (.tar.gz) includes HebbPlots of low-CpG promoters active in 57 tissues/cell types. (TAR 2971 kb)
DOI: 10.6084/m9.figshare.7040732
title: Additional file 5: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: Chromosome-wide binary SNP matrix of analyzed genomes. (XLSX 530Â kb)
DOI: 10.6084/m9.figshare.7040732.v1
title: Additional file 5: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: Chromosome-wide binary SNP matrix of analyzed genomes. (XLSX 530Â kb)
DOI: 10.6084/m9.figshare.7040717
title: Additional file 4: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: MLVA-31 matrix of strains HKI4363/88 and BA2968 and their closest matches. (XLSX 22Â kb)
DOI: 10.6084/m9.figshare.7040720
title: Additional file 3 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of high-CpG promoters. This compressed file (.tar.gz) includes HebbPlots of high-CpG promoters active in 57 tissues/cell types. (TAR 2654 kb)
DOI: 10.6084/m9.figshare.7040720.v1
title: Additional file 3 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of high-CpG promoters. This compressed file (.tar.gz) includes HebbPlots of high-CpG promoters active in 57 tissues/cell types. (TAR 2654 kb)
DOI: 10.6084/m9.figshare.7040717.v1
title: Additional file 4: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: MLVA-31 matrix of strains HKI4363/88 and BA2968 and their closest matches. (XLSX 22Â kb)
DOI: 10.6084/m9.figshare.7040708
title: Additional file 2 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of active promoters on the negative strand. This compressed file (.tar.gz) includes HebbPlots of promoters on the negative strand active in 57 tissues/cell types. (TAR 2952 kb)
DOI: 10.6084/m9.figshare.7040708.v1
title: Additional file 2 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of active promoters on the negative strand. This compressed file (.tar.gz) includes HebbPlots of promoters on the negative strand active in 57 tissues/cell types. (TAR 2952 kb)
DOI: 10.6084/m9.figshare.7040702
title: Additional file 3: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: Genome sequences accession numbers of Finnish and additional B. anthracis strains from publically available databases. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.7040702.v1
title: Additional file 3: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: Genome sequences accession numbers of Finnish and additional B. anthracis strains from publically available databases. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.7040693
title: Additional file 2: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: Origin of near relatives of strain HKI4363/88 and strain BK2968. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.7040696
title: Additional file 1 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of active promoters on the positive strand. This compressed file (.tar.gz) includes HebbPlots of promoters on the positive strand active in 57 tissues/cell types. (TAR 2949 kb)
DOI: 10.6084/m9.figshare.7040696.v1
title: Additional file 1 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlots of active promoters on the positive strand. This compressed file (.tar.gz) includes HebbPlots of promoters on the positive strand active in 57 tissues/cell types. (TAR 2949 kb)
DOI: 10.6084/m9.figshare.7040693.v1
title: Additional file 2: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: Origin of near relatives of strain HKI4363/88 and strain BK2968. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.7040678
title: Additional file 1: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: Melt-MAMA canSNP primer sequences. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.7040681
title: Additional file 11 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlot Software. This compressed file (.tar.gz) includes the source code (Matlab and Perl) of HebbPlot. (TAR 15 kb)
DOI: 10.6084/m9.figshare.7040681.v1
title: Additional file 11 of HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

description: HebbPlot Software. This compressed file (.tar.gz) includes the source code (Matlab and Perl) of HebbPlot. (TAR 15 kb)
DOI: 10.6084/m9.figshare.7040678.v1
title: Additional file 1: of Genotyping and phylogenetic placement of Bacillus anthracis isolates from Finland, a country with rare anthrax cases

description: Melt-MAMA canSNP primer sequences. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.7040663
title: Additional file 2: of Angiogenesis and radiological tumor growth in patients with glioblastoma

description: Dataset supporting conclusions. The minimal dataset necessary to replicate the findings reported in the article. Microvessel densities (MVDs) of both markers are presented as mean counts for 3 high-power fields (HPFs). Regarding the categorical histopathological features (thromboses, high cellular density, and high vascular density), “1” indicates that features are present, while “0” indicates that they are not. Mitotic counts are counted in 10 HPFs. Tumors growing faster than expected are indicated by “1”, whereas slow-growing tumors are indicated by “0”. Patients preoperatively treated with corticosteroids or having sparse amount of tissue available for the histopathological evaluation are indicated by “1” in the respective variables. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7040663.v1
title: Additional file 2: of Angiogenesis and radiological tumor growth in patients with glioblastoma

description: Dataset supporting conclusions. The minimal dataset necessary to replicate the findings reported in the article. Microvessel densities (MVDs) of both markers are presented as mean counts for 3 high-power fields (HPFs). Regarding the categorical histopathological features (thromboses, high cellular density, and high vascular density), “1” indicates that features are present, while “0” indicates that they are not. Mitotic counts are counted in 10 HPFs. Tumors growing faster than expected are indicated by “1”, whereas slow-growing tumors are indicated by “0”. Patients preoperatively treated with corticosteroids or having sparse amount of tissue available for the histopathological evaluation are indicated by “1” in the respective variables. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7040582
title: Additional file 1: of Effectiveness of skull X-RAY to determine cochlear implant insertion depth

description: Data. (XLSX 622 kb)
DOI: 10.6084/m9.figshare.7040579
title: MOESM5 of Genome alterations associated with improved transformation efficiency in Lactobacillus reuteri

description: Additional file 5: Table S2. Oligonucleotides used in this study.
DOI: 10.6084/m9.figshare.7040579.v1
title: MOESM5 of Genome alterations associated with improved transformation efficiency in Lactobacillus reuteri

description: Additional file 5: Table S2. Oligonucleotides used in this study.
DOI: 10.6084/m9.figshare.7040573
title: MOESM4 of Genome alterations associated with improved transformation efficiency in Lactobacillus reuteri

description: Additional file 4: Table S1. Bacterial strains and plasmids used in this study.
DOI: 10.6084/m9.figshare.7040573.v1
title: MOESM4 of Genome alterations associated with improved transformation efficiency in Lactobacillus reuteri

description: Additional file 4: Table S1. Bacterial strains and plasmids used in this study.
DOI: 10.6084/m9.figshare.7040540
title: Additional file 7: of Liver cancer cell lines distinctly mimic the metabolic gene expression pattern of the corresponding human tumours

description: Table S6. Proteomics profile of HUH7 vs HLE cell lines. Expression pattern of proteins for which at least 2 peptides were detected in the cell lines after 48 h culture. When compared, 797 proteins emerged as more expressed in HLE cells whereas 616 proteins were more expressed in HUH7 (adjusted P
DOI: 10.6084/m9.figshare.7040540.v1
title: Additional file 7: of Liver cancer cell lines distinctly mimic the metabolic gene expression pattern of the corresponding human tumours

description: Table S6. Proteomics profile of HUH7 vs HLE cell lines. Expression pattern of proteins for which at least 2 peptides were detected in the cell lines after 48 h culture. When compared, 797 proteins emerged as more expressed in HLE cells whereas 616 proteins were more expressed in HUH7 (adjusted P
DOI: 10.6084/m9.figshare.7040537
title: Additional file 5: of Evolution within a language: environmental differences contribute to divergence of dialect groups

description: Datasets of the dialect group analyses. Linguistic FST distances (sheet 1), geographical distances (sheet 2) and raw data of 33 environmental and cultural variables (sheet 3) used in the analyses of the dialect groups. (XLS 52 kb)
DOI: 10.6084/m9.figshare.7040537.v1
title: Additional file 5: of Evolution within a language: environmental differences contribute to divergence of dialect groups

description: Datasets of the dialect group analyses. Linguistic FST distances (sheet 1), geographical distances (sheet 2) and raw data of 33 environmental and cultural variables (sheet 3) used in the analyses of the dialect groups. (XLS 52 kb)
DOI: 10.6084/m9.figshare.7040525
title: Additional file 4: of Evolution within a language: environmental differences contribute to divergence of dialect groups

description: Linguistic distances between municipalities. Rough equivalents of Séguy’s dialect distance metric, i.e. a percentage of disagreeing linguistic features between pairs of municipal dialects. (CSV 1277 kb)
DOI: 10.6084/m9.figshare.7040525.v1
title: Additional file 4: of Evolution within a language: environmental differences contribute to divergence of dialect groups

description: Linguistic distances between municipalities. Rough equivalents of Séguy’s dialect distance metric, i.e. a percentage of disagreeing linguistic features between pairs of municipal dialects. (CSV 1277 kb)
DOI: 10.6084/m9.figshare.7040513
title: Additional file 5: of Liver cancer cell lines distinctly mimic the metabolic gene expression pattern of the corresponding human tumours

description: Table S4. Consistent genes in all four human HCC datasets analysed in this study. These are the genes differentially upregulated (in bold, n = 2017) or downregulated (n = 1547, P
DOI: 10.6084/m9.figshare.7040510
title: Additional file 3: of Evolution within a language: environmental differences contribute to divergence of dialect groups

description: Geographical distances between municipalities. Planar straight-line distances between municipal population centres (in metres). (CSV 1490 kb)
DOI: 10.6084/m9.figshare.7040513.v1
title: Additional file 5: of Liver cancer cell lines distinctly mimic the metabolic gene expression pattern of the corresponding human tumours

description: Table S4. Consistent genes in all four human HCC datasets analysed in this study. These are the genes differentially upregulated (in bold, n = 2017) or downregulated (n = 1547, P
DOI: 10.6084/m9.figshare.7040507
title: Additional file 1: of A three-decade review of telemetry studies on vultures and condors

description: Table S1. Scientific literature about telemetry studies published on vultures between 1987 and 2017. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7040510.v1
title: Additional file 3: of Evolution within a language: environmental differences contribute to divergence of dialect groups

description: Geographical distances between municipalities. Planar straight-line distances between municipal population centres (in metres). (CSV 1490 kb)
DOI: 10.6084/m9.figshare.7040507.v1
title: Additional file 1: of A three-decade review of telemetry studies on vultures and condors

description: Table S1. Scientific literature about telemetry studies published on vultures between 1987 and 2017. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7040498
title: Additional file 2: of Evolution within a language: environmental differences contribute to divergence of dialect groups

description: Environmental, cultural and administrative data used in the analyses of municipal dialects. Raw data of 40 environmental and cultural variables (sheet 1), and binary data on administrative history (sheet 2) used in the analyses of municipal dialects in 471 municipalities. (XLS 805 kb)
DOI: 10.6084/m9.figshare.7040498.v1
title: Additional file 2: of Evolution within a language: environmental differences contribute to divergence of dialect groups

description: Environmental, cultural and administrative data used in the analyses of municipal dialects. Raw data of 40 environmental and cultural variables (sheet 1), and binary data on administrative history (sheet 2) used in the analyses of municipal dialects in 471 municipalities. (XLS 805 kb)
DOI: 10.6084/m9.figshare.7040471
title: MOESM3 of Regulatory processes that control haploid expression of salmon sperm mRNAs

description: Additional file 3. Genome coordinates for RefSeq and assembled transcripts. a Genomic coordinates of the 5’-utr for transcripts of interest. b Genomic coordinates for full transcripts including 5’-utr, exons and 3’-utr.
DOI: 10.6084/m9.figshare.7040471.v1
title: MOESM3 of Regulatory processes that control haploid expression of salmon sperm mRNAs

description: Additional file 3. Genome coordinates for RefSeq and assembled transcripts. a Genomic coordinates of the 5’-utr for transcripts of interest. b Genomic coordinates for full transcripts including 5’-utr, exons and 3’-utr.
DOI: 10.6084/m9.figshare.7040411
title: Application of 3D printed diffusion chamber for studying phenotypes of bacterial pathogens in soil

description: This fileset accompanies a manuscript describing a 3D printed diffusion chamber for studying interactions between bacterial pathogens and soil matrix. 3D models for diffusion chamber are included as .stl files. Primary data for FAME profiles (GC chromatograms) are included as .pdf. <br><br>Published manuscript: Journal of Microbiological Methods. 162: 8-15. doi: 10.1016/j.mimet.2019.05.002<br>
DOI: 10.6084/m9.figshare.7040411.v1
title: Application of 3D printed diffusion chamber for studying phenotypes of bacterial pathogens in soil

description: This fileset accompanies a manuscript describing a 3D printed diffusion chamber for studying interactions between bacterial pathogens and soil matrix. 3D models for diffusion chamber are included as .stl files. Primary data for FAME profiles (GC chromatograms) are included as .pdf. <br><br>Published manuscript: Journal of Microbiological Methods. 162: 8-15. doi: 10.1016/j.mimet.2019.05.002<br>
DOI: 10.26180/5b8dfa852fcf1
title: A digital story about museums, arts and wellbeing

description: A digital story of an intergenerational wellbeing program involving U3A, Kananook Primary Schoool, Museums Victoria and Monash University.<br>Burke, G., Hall, C., O'Connor, J., Alfrey, L., Hardie, S. and Price, A. (2018). <i>A digital story about museums, arts and wellbeing</i>. 10.26180/5b8dfa852fcf1