cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13637630.v3
title: A type I IFN, prothrombotic hyperinflammatory neutrophil signature is distinct for COVID-19 ARDS

description: Acute respiratory distress syndrome (ARDS) is a severe critical condition with a high mortality that is currently in focus given that it is associated with mortality caused by coronavirus induced disease 2019 (COVID-19). Neutrophils play a key role in the lung injury characteristic of non-COVID-19 ARDS and there is also accumulating evidence of neutrophil mediated lung injury in patients who succumb to infection with SARS-CoV-2. We undertook a functional proteomic and metabolomic survey of circulating neutrophil populations, comparing patients with COVID-19 ARDS and non-COVID-19 ARDS to understand the molecular basis of neutrophil dysregulation. Expansion of the circulating neutrophil compartment and the presence of activated low and normal density mature and immature neutrophil populations occurs in ARDS, irrespective of cause. Release of neutrophil granule proteins, neutrophil activation of the clotting cascade and upregulation of the Mac-1 platelet binding complex with formation of neutrophil platelet aggregates is exaggerated in COVID-19 ARDS. Importantly, activation of components of the neutrophil type I interferon responses is seen in ARDS following infection with SARS-CoV-2, with associated rewiring of neutrophil metabolism to promote glutamine utilisation, and the upregulation of antigen processing and presentation. Whilst dexamethasone treatment constricts the immature low density neutrophil population it does not impact upon prothrombotic hyperinflammatory neutrophil signatures.
DOI: 10.6084/m9.figshare.19623558.v1
title: Looking into their eyes: Interview transcripts

description: The transcribed interviews used for analysis in the "looking into their eyes" work. Consent data are contained within the transcripts.
DOI: 10.6084/m9.figshare.5660815.v1
title: US Congress

description: Each Zip file contains all the bills introduced in that congress.<br>So 93.Zip contains all bills in the 93rd congress.<br><br>The data has been collected by ProPublica using APIs released by the US Congress.<br><br>https://www.propublica.org/datastore/dataset/congressional-data-bulk-legislation-bills<br>
DOI: 10.6084/m9.figshare.1153786.v1
title: Shear Data

description: From manuscript: Development of emulsification resistant heavier-than-water tamponade using high molecular weight silicone oil polymers
DOI: 10.6084/m9.figshare.8202314.v3
title: Global kinome profiling reveals abnormal active kinases in human skeletal muscle from obese insulin resistant participants

description: <b>ABATRACT</b> <b>Context:</b> Obesity-related insulin resistance (OIR) is one of the main contributors to type 2 diabetes and other metabolic diseases. Protein kinases are implicated in key signaling steps including insulin signaling and glucose metabolism. Molecular mechanisms underlying OIR involving global active kinases remain less understood. <b>Objective: </b>To investigate abnormal active kinase responsible for OIR in human skeletal muscle. <b>Design: </b>Stable isotopic labeling-based quantitative proteomics analysis and affinity-based active enzyme probes to profile <i>in vivo</i> active kinases. <b></b> <b>Participants: </b>Eight lean control and eight OIR but non-diabetic human participants who underwent hyperinsulinemic euglycemic clamp with muscle biopsy.<b></b> <b>Results: </b>We identified the 1st active kinome comprised of 54 active protein kinases in human skeletal muscle. The activities of 23 kinases were different in OIR compared to Lean muscle (11 hyper- and 12 hypo-active), while their protein abundance was the same between the two groups. The activities of multiple kinases involved in AMPK and p38 signaling were lower in OIR compared to Lean. On the contrary, multiple kinases in JNK signaling pathway exhibited higher activity in OIR vs. Lean. The kinase-substrate-prediction based on experimental data further confirmed a potential down-regulation of insulin signaling (e.g., inhibited phosphorylation of IRS1 and AKT1/2). <b>Conclusions: </b>These findings provide a global view of the active kinome in OIR and Lean muscle, pinpoint novel specific impairment in kinase activities in multiple signaling pathways important for skeletal muscle insulin resistance and provide potential drug targets (i.e., abnormal active kinase) to prevent and/or reverse skeletal muscle insulin resistance in humans.
DOI: 10.6084/m9.figshare.28603316.v1
title: Childbirth Experience Among Women

description: This data presents text from childbirth experiences among women from the social media platform Facebook. This is used to analyze sentiments shared by women for education, hospital experiences and healthcare.
DOI: 10.6084/m9.figshare.8081081.v1
title: Landmark Coordinates for Canid Tooth Pits

description: Landmark data from tooth pits of different species of canid, including Wolves, Foxes and Irish Setter Gundogs. All data property of the authors of the article:<br><b>Yravedra, J.; Maté-González, M.Á.; Courtenay, L.A.; González-Aguilera, D. (In Prep) The use of dog, wolf and fox tooth marks on bone for the identification of livestock predation</b>
DOI: 10.17632/673p74wh5y
title: Examining metrics for fatigue life predictions of additively manufactured IN718 via crystal plasticity modeling including the role of simulation volume and microstructural constraints

description: The raw data required to reproduce the probability of failure results ( Especially, Figures 8,11, and 12) in this paper are compiled in the form of an attached excel file. The reader can find the data stored in three separate sheets within the excel file attached.
DOI: 10.17632/hps25b9yfv
title: Del Rio et al., EPMA and LA-ICP-MS Data

description: All EPMA and LA-ICP-MS profile and bulk data from the study by Del Rio et al.
DOI: 10.6084/m9.figshare.28831319.v1
title: Requisitos para la selección de software de gestión para bibliotecas y colecciones digitales patrimoniales

description: Este conjunto de datos recoge una recopilación de requisitos para la selección de sistemas de gestión de repositorios para fondos y colecciones patrimoniales consolidados a través de una revisión bibliográfica y el análisis de algunas de las aplicaciones de software más representativas del mercado: DSpace-GLAM, Omeka Classic, Omeka S, Artefactual y ArchivesSpace.
DOI: 10.17632/2gjvrzddv7
title: Hanthi, Ramirez, Appleby et al

description: Original results
DOI: 10.6084/m9.figshare.26962312.v1
title: Appendix for Paper.

description: This item contains all appendices in the paper.
DOI: 10.6084/m9.figshare.28169087.v1
title: <b><i>A Comparative Study of the Clinical and Autonomic Effects of Cervical Manipulation and Vagus Nerve Stimulation in Non-specific Neck Pain</i></b>

description: <b><i>A Comparative Study of the Clinical and Autonomic Effects of Cervical Manipulation and Vagus Nerve Stimulation in Non-specific Neck Pain</i></b>
DOI: 10.6084/m9.figshare.3557166.v1
title: Appendix D. Graphical representations of direct and indirect effects of environment in early life on adult body mass of roe deer at Chizé, France.

description: Graphical representations of direct and indirect effects of environment in early life on adult body mass of roe deer at Chizé, France.
DOI: 10.6084/m9.figshare.11683959.v7
title: Supplementary Table 4-18 and R script for WGCNA

description: Supplementary Table 4. List of annotated probes that were significantly (p &lt;0.05) upregulated with ≥2-fold changes in any B cell subset of pSS compared with those of HCs.Supplementary Table 5. List of probes that were significantly (p &lt;0.05) upregulated with ≥2-fold changes in all B cell subpopulations compared with those of HCs.Supplementary Tables 6 and 7. List of probes in gene co-expression modules of pSS (Table 6) and HCs (Table 7). To quantify associations of individual genes with the disease activity score (EULAR Sjögren's Syndrome Disease Activity Index, ESSDAI), we defined Gene Significance (GS) as the absolute value of the correlation between each gene and ESSDAI. P.GS represents the p-value of GS. For each module, we defined a quantitative measure of module membership (MM) as the correlation between the module eigengene and the gene expression profile. P.MM means the p value of MM. This allowed us to quantify the similarities among all genes of every module.Supplementary Table 8. List of canonical pathways associated with gene co-expression modules of pSS.Supplementary Table 9. List of upstream regulators associated with gene co-expression modules of pSS.Supplementary Table 10. List of disease and functions associated with gene co-expression modules of pSS.Supplementary Table 11. List of canonical pathways associated with the identified gene co-expression modules of HCs.Supplementary Table 12. List of upstream regulators associated with gene co-expression modules of HCs.Supplementary Table 13. List of disease and functions associated with gene co-expression modules of HCs.Supplementary Table 14. List of canonical pathways specific to pSS.Supplementary Table 15. List of upstream regulators specific to pSS.Supplementary Table 16. List of disease and functions specific to pSS.Supplementary Table 17. The distribution of ESSDAI of patients with pSS.Supplementary Table 18. The detailed clinical information of patients with pSS.
DOI: 10.6084/m9.figshare.21724142.v3
title: Semantic segmentation dataset of Chinese martial arts classic movie props(part)

description: Semantic segmentation is a hot area in computer vision (CV) research. The integration of computer vision and the film and television industry has put forward higher requirements for media data. At present, the analysis of film clips integrating high dynamics and continuous frames is one of the hot spots of video semantic segmentation. High-precision, high-volume data is the basis for proposing and improving deep learning models. However, the content labels of existing datasets are disorderly, which is difficult to uniformly evaluate and review, and the label category subjects are blurred, which directly affects the effectiveness of the model. Chinese martial arts films are a genre of films with Chinese national characteristics and the epitome of traditional Chinese culture. The "theme props" in martial arts films not only show various weapons in ancient China, but also integrate the values of "chivalry" and "righteousness" in traditional Chinese culture, becoming an indispensable part of martial arts movies. This study creatively performs artificial semantic segmentation of props in Chinese martial arts films, and establishes prop segmentation rules and general review standards. It includes frame pictures of movie clips at 4 frames per second, improved semi-automatic annotation of 6 props (weapons), and a visual version of pixel (mask) markers. As far as we know, this dataset is the largest semantic segmentation dataset on Chinese movie props to date. This dataset can be used for traditional inspection tasks in computer vision as well as related research on interdisciplinary and interdisciplinary techniques.
DOI: 10.6084/m9.figshare.22083131.v1
title: Qualitative raw data

description: Interviews of multiple stakeholders on adolescent mental health
DOI: 10.6084/m9.figshare.25699221.v1
title: <b>45-Color Full Spectrum Flow Cytometry Panel</b>

description: This 45-color flow cytometry-based panel was developed as an expansion of the previously published OMIP-069 and serves as an in-depth immunophenotyping of the major cell subsets present in human peripheral blood. The experiment contains the raw and unmixed FCS files.
DOI: 10.17632/br5kzcvxyh
title: Knowledge Gap on Balanced Diet: A Pilot Study on Adolescents in North India

description: Responses to the Knowledge Assessment Questionnaire for 71 respondents recruited for a pilot study in northern India.

The aim of the study was to assess the Knowledge level of adolescent girls in a school setting via a validated questionnaire. A Knowledge Assessment Questionnaire (KAQ) consisting of of 21 multiple‑choice questions. Demographic details such as age, annual family income of a family, education of father and mother, and type of family composed of Part 1. Part 2 included 4 sections related to balanced eating, the importance and sources of various food groups and questions related to anemia.  The data shows the answers given by each respondent to every question. The data was gathered by administering the KAQ to the students and they were not allowed to refer to any source before answering the questions. The correct answer was given 1 mark while 0 was given for the Don't know/incorrect answer. This knowledge scoring resulted in a score ranging between 0-16. The scores were divided as, Poor – “0-4”, Average- “5-8”, Good- “9-12”, Excellent “13-16” and are mentioned under "Knowledge_Level". The headings Q1cat, Q2cat, and so on depict the scores given after scoring. The title "Score" depcits the total score of the respondent. The data interpretation was that the majority of the respondents scored below the average score. 
This data can be used to study the relationship between dependent and independent variables, differences in average and mean scores scored by respondents and so on.
DOI: 10.6084/m9.figshare.19958945.v1
title: Surgical treatment of cleft lip

description: We performed a systematic review of the literature on the surgical treatment of cleft lip, emphasizing the prevalence, complications associated with the treatment and the points of disagreement between authors. We conducted a literature cross-sectional search that analyzed publications in books, articles and on the databases SciELO - Scientific Electronic Library Online, PubMed, of the National Center for Biotechnology Information. We conclude that: 1) the severity of the cleft will indicate the technique presenting more advantages; 2) the different approaches indicate that there is no consensus on the optimal technique; and 3) the surgeon experience contributes to choosing the best option.
DOI: 10.6084/m9.figshare.3489932.v2
title: Analysis of medical images with an open tool

description: Medical images are usually provided in digital format through CD or DVD recorded by the radiology clinic. These images are stored in a standard format, called [DICOM][dicom] (*Digital Imaging and Communications in Medicine*). The availability of images in digital format allows handling and sharing with greater flexibility. In our trial, we are performing the review of images digitally acquired (when available) in **anonymised** form, ie, without any information that can directly or indirectly identify patients. To do this, we will use the medical image sharing service [DICOM Library][dicom-library]. This service, created by Softneta with funding from the European Union, retrieves DICOM files, anonymizing them automatically in the browser side before uploading and allows one to share medical images without identification of patients, professionals and health services.(excerpt)
DOI: 10.21954/ou.rd.16832266.v2
title: Oxia Planum ExoMars 2022 Rover Landing Site Mounds: Morphometric Data

description: Two files containing morphometric data on a population of kilometre-scale mounds in Oxia Planum, Mars – the landing site of the ExoMars 2022 Rover, 'Rosalind Franklin'.<br>Morphometric data is given in two files, one .xls and one .zip containing .shp files for use in GIS software.
DOI: 10.6084/m9.figshare.20439849.v1
title: Results of the MLMAs

description: Here the results of the differend MLMAs (Model 1 and 2) performed for the paper "Fine-mapping and identification of candidate causal genes for tail length in the Merinolandschaf breed" are shown. Out of these files the manhattan-plots were performed.
DOI: 10.6084/m9.figshare.27254217.v1
title: Supplementary Material for: Chinese Expert Consensus on the Whole-Course Management of Hepatocellular Carcinoma (2023 Edition)

description: Background: Hepatocellular carcinoma (HCC) is one of the most common malignant tumors in China. Most HCC patients have the complication of chronic liver disease and need overall consideration and whole-course management, including diagnosis, treatment and follow-up. To develop a reasonable, long-term, and complete management plan, multiple factors need to be considered, including the patient's general condition, basic liver diseases, tumor stage, tumor biological characteristics, treatment requirements and economic cost. Summary: To better guide the whole-course management of HCC patients, the Chinese Association of Liver Cancer and the Chinese Medical Doctor Association has gathered multidisciplinary experts and scholars in relevant fields to formulate the “Chinese Expert Consensus on The Whole-Course Management of Hepatocellular Carcinoma (2023).” Key Messages: This expert consensus, based on the current clinical evidence and experience, proposes surgical and nonsurgical HCC management pathways and involves 18 recommendations, including perioperative treatment, systematic treatment combined with local treatment, conversion treatment, special population management, symptomatic support treatment, and follow-up management.
DOI: 10.6084/m9.figshare.15147642.v3
title: The genetic structure of the Turkish population reveals high levels of variation and admixture

description: Turkish Variome contains allele frequencies of 46,739,479 variants of 3,362 unrelated Turkish individuals.<br>Turkish reference panel for imputation contains phased haplotypes of 773 whole-genome sequenced unrelated Turkish individuals.
DOI: 10.17632/2364hs2kpm
title: Data for Marine Geology

description: Data for: Magnesium isotopic composition of back-arc basin lavas and its implication for the recycling of serpentinites-derived fluids

Table 1. Magnesium isotopic compositions of lavas from the OT and SLB
Table 2. Parameters for the endmembers used for mixing and AFC models.
DOI: 10.17632/w25cc5pv34
title: Integrative study of skeletal muscle mitochondrial dysfunction in a murine pancreatic cancer-induced cachexia model

description: Complete raw data set pertaining to the article Gicquel et al., Integrative study of skeletal muscle mitochondrial dysfunction in a murine pancreatic cancer-induced cachexia model. eLife. 2024.
DOI: 10.6084/m9.figshare.11618223.v1
title: Simulated spectrum peak wave period (3-hourly, 1850.01-2014.12) from FIO-ESM v2.0 historical experiment r1i1p1f1

description: Simulated spectrum peak wave period (3-hourly, 1850.01-2014.12) from FIO-ESM v2.0 historical experiment r1i1p1f1, which is branch from Jan 1, 301 of piControl experiment. The grid, named gx1v6, is the displaced pole (the North Pole displaced to the Greenland) grid with 1.1 degree in longitude and 0.27-0.54 degree in latitude.
DOI: 10.6084/m9.figshare.1309325.v1
title: Subject k12

description: Interhemispheric differences of fMRI responses to visual stimulation
DOI: 10.17632/zgt9zzsffs
title: Power of brand

description: Power of Brand
DOI: 10.6084/m9.figshare.22316758.v1
title: Supplementary Material for: Success of pregnancy in a patient on high volume hemodiafiltration with citrate-acidified dialysate

description: Although pregnancy in dialysis patients is rare, recent reports in the literature have shown improvement in pregnancy outcome in this population. Increasing doses of dialysis has led to improvement in fetal prognosis, but recommendations are still lacking, and there are few documented reports of pregnant woman on high volume online hemodiafiltration. Here we report the first successful pregnancy in a 28-year-old patient on daily high volume online post-dilution hemodiafiltration with a citrate dialysate. At 37 weeks and 1 day she delivered a healthy 2.3 kg baby that did not require neonatal intensive care. This case report suggests that hemodiafiltration with a dialysate acidified with citrate is safe in pregnancy. Further reports and a registry are necessary to confirm that high volume online hemodiafiltration with a citrate dialysate should be the preferred dialysis modality in pregnant women.
DOI: 10.6084/m9.figshare.25152302.v1
title: Supplementary Material for: Causal relationship between Parkinson's disease with heart and vascular disease: a two-sample Mendelian randomization study

description: Introduction: The aim of this study was to investigate the causal relationship between Parkinson's disease (PD) and myocardial infarction (MI), atrial fibrillation and flutter (AF), and venous thromboembolism (VTE) by Mendelian randomization (MR) analysis. Methods: By using data from publicly available genome-wide association studies from databases, single nucleotide polymorphisms (SNPs) were screened as instrumental variables (IVs), and finished the MR analysis by inverse-variance weighted (IVW), MR-egger, weighted median methods. Results: The primary IVW method showed a negative association between genetically predicted Parkinson's disease and risk of myocardial infarction (OR = 0.9989; 95% CI, 0.9980-0.9998; p = 0.02). However, Parkinson's disease was not significantly associated with atrial fibrillation and flutter or venous thromboembolism. Conclusion: This study suggests a negative association between Parkinson's disease with myocardial infarction, which implies that Parkinson's disease has a protective effect on myocardial infarction.
DOI: 10.6084/m9.figshare.3593292.v1
title: Supplementary Material for: Genotype/Phenotype Analysis in 67 Chinese Patients with Gitelman's Syndrome

description: <b><i>Background:</i></b> Gitelman's syndrome (GS) is an autosomal recessive renal tubular disorder, which is caused by the mutations in <i>SLC12A3</i>. This study was designed to analyze the characteristics of the genotype and phenotype, and follow-up in the largest group of Chinese patients with GS. <b><i>Methods:</i></b> Sixty-seven patients with GS underwent <i>SLCl2A3</i> analysis, and their clinical characteristics and biochemical findings as well as follow-up were reviewed, aiming to achieve a better description of GS. Additionally, the association of genotype and phenotype was explored. <b><i>Results:</i></b> Forty-one different mutations were identified within these 67 GS patients, including 11 novel mutations and 5 recurrent ones. Typical hypocalciuria and hypomagnesemia were not found in 6 (9%) and 8 (11.9%) patients, respectively. Male patients and those harboring severe mutations in both alleles had significant higher urinary fractional excretion (FE) of potassium, magnesium and chlorine. In addition, there were 2 patients who had chronic kidney disease (estimated glomerular filtration rate &lt;60 ml/min/1.73 m<sup>2</sup>) and 32 patients with abnormal glucose metabolism. <b><i>Conclusions:</i></b> We identified 41 mutations related to GS, containing 11 novel variants and 5 high-frequency ones, which should facilitate earlier and more accurate diagnosis of GS. FE of electrolytes in urine may be more sensitive in the phenotype evaluation and differential diagnosis than corresponding serum electrolytes. Hypokalemia and hypomagnesemia in GS were difficult to correct; however, spironolactone might be helpful for hypokalemia to some degree. Compared with normal people, patients with GS were at higher risk of developing type 2 diabetes.
DOI: 10.60893/figshare.apl.27276549.v1
title: Supplemental information

description: Supplemental information describing the experimental section in more detail.
DOI: 10.17632/d9xmv47y66
title: Surrogate Model of FE Corrosion Model

description: This repository consists of the code and a pre-trained model. The code is written in Wolfram Language. The code is LapCor9.nb. The pre-trained model is pretrained_corbox _ 1.mx. 
The code consists of an FE model of two-dimensional electrochemical corrosion with rectangular geometry. The model is based on Laplace's equation. The surrogate model is based on Gaussian Process Regression. 
The outputs from previous executions are left intact.