cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/jf39t-x8w58
title: P41+P41

description: Raw data files of P41+P41
description: <strong>Tilt Series Date:</strong> 2015-04-18</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 90.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-33/rawdata/</p>atlas20020.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-33/rawdata/atlas20020.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas20020_part131_3.rec,  Reconstruction (Pixel Size 1.56 nm), 222.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-33/3dimage_54538/atlas20020_part131_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/2vvpn-swy02
title: E. coli pED208_log

description: cells expressing T4SS in log phase
description: <strong>Tilt Series Date:</strong> 2015-04-13</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-04-13-30/rawdata/</p>pED_log20002.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-04-13-30/rawdata/pED_log20002.mrc"
        > <i class="download icon"></i> Download </a></p>

        pED_log20002_part121_56.rec,  Reconstruction (Pixel Size 2.0 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-04-13-30/3dimage_54052/pED_log20002_part121_56.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.ahz7kv
title: Occurrence Download

description: A dataset containing 22403 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Kenya, Tanzania, United Republic of, Uganda)",
 "DatasetKey is one of (Kenya Bird Map (Full protocol and Adhoc records), iNaturalist Research-grade Observations, International Barcode of Life project (iBOL), VectorBase (Bioinformatics Resource for Invertebrate Vectors of Human Pathogens), Observation.org, Nature data from around the World, Global soil organisms, Natural History Museum (London) Collection Specimens)",
 "IucnRedListCategory is one of (VU, CR, EW)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 22403 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046676-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c89e5p
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calystegia sepium",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 99 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046677-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x7zgnc
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calystegia sepium",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 19 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046678-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/tec0q-3ec85
title: P41+P41

description: Raw data files of P41+P41
description: <strong>Tilt Series Date:</strong> 2015-04-18</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 90.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-24/rawdata/</p>atlas20011.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-24/rawdata/atlas20011.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas20011_part131_2.rec,  Reconstruction (Pixel Size 1.56 nm), 222.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-24/3dimage_54523/atlas20011_part131_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/072vs-fj003
title: Selenomonas

description: Raw data files of Selenomonas
description: <strong>Tilt Series Date:</strong> 2015-05-22</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Selenomonas</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-22-10/rawdata/</p>Selenomonas0006.mrc,  Tilt Series (Pixel Size 0.63 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-22-10/rawdata/Selenomonas0006.mrc"
        > <i class="download icon"></i> Download </a></p>

        Selenomonas0006_full.rec,  Reconstruction (Pixel Size 2.52 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-22-10/3dimage_57381/Selenomonas0006_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gjgxe-b5016
title: E. coli QQQQ

description: Penicillin lysed E. coli QQQQ (grown in TB medium)
description: <strong>Tilt Series Date:</strong> 2015-03-05</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: 6.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-05-13/rawdata/</p>QQQQMarTITAN0009.mrc,  Tilt Series (Pixel Size 0.27 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-05-13/rawdata/QQQQMarTITAN0009.mrc"
        > <i class="download icon"></i> Download </a></p>

        QQQQMarTITAN0009_part61_19.rec,  Reconstruction (Pixel Size 1.08 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-05-13/3dimage_52573/QQQQMarTITAN0009_part61_19.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/x7tkk-7yy08
title: S. aureus

description: Raw data files of S. aureus
description: <strong>Tilt Series Date:</strong> 2017-11-06</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Staphylococcus aureus</p>
<strong>Strain:</strong> subsp. aureus str. Newman</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-51.0°, 50.0°), step: 1.5°, constant angular increment, dosage: 280.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2017-11-06-1/rawdata/</p>Sa_rpsF0001.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2017-11-06-1/rawdata/Sa_rpsF0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        Sa_rpsF0001_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2017-11-06-1/3dimage_90087/Sa_rpsF0001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/75t4z-24q39
title: pED208_log

description: E. coli cells carrying the pED208 plasmid for T4SS were grown to OD of 0.5
description: <strong>Tilt Series Date:</strong> 2015-03-28</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-28-20/rawdata/</p>pED208_log0016.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-28-20/rawdata/pED208_log0016.mrc"
        > <i class="download icon"></i> Download </a></p>

        pED208_log0016_part121_3.rec,  Reconstruction (Pixel Size 2.0 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-28-20/3dimage_53423/pED208_log0016_part121_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.14655584
title: Comparing near-term information from national climate scenarios and initialised decadal predictions

description: Input data and code for the figures in the Climate Dynamics paper "Comparing near-term information from national climate scenarios and initialised decadal predictions" authored by James M. Murphy, Glen R. Harris, and Robin T. Clark.





doi: https://doi.org/10.1007/s00382-025-07807-4



The file murphy2025_qdc.tar.gz is a gzipped Unix tarfile containing input data, figures and code for figure production for this paper.

The file README.md is a brief introduction (in GitHub markdown format) to the data contained in the tarfile.
DOI: 10.5281/zenodo.14655585
title: Comparing near-term information from national climate scenarios and initialised decadal predictions

description: Input data and code for the figures in the Climate Dynamics paper "Comparing near-term information from national climate scenarios and initialised decadal predictions" authored by James M. Murphy, Glen R. Harris, and Robin T. Clark.





doi: https://doi.org/10.1007/s00382-025-07807-4



The file murphy2025_qdc.tar.gz is a gzipped Unix tarfile containing input data, figures and code for figure production for this paper.

The file README.md is a brief introduction (in GitHub markdown format) to the data contained in the tarfile.
DOI: 10.22002/4zcd3-6xz05
title: TopJ + MPN119

description: Raw data files of TopJ + MPN119
description: <strong>Tilt Series Date:</strong> 2015-04-07</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-07-1/rawdata/</p>atlas10006.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-07-1/rawdata/atlas10006.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10006_part131_5.rec,  Reconstruction (Pixel Size 1.56 nm), 222.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-07-1/3dimage_53759/atlas10006_part131_5.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mv74v-v7384
title: V. cholerae

description: for MSHA pili
description: <strong>Tilt Series Date:</strong> 2016-01-04</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-01-04-68/3dimage_72121/</p>20160104_Vcholerae_MSHA_10068_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-01-04-68/3dimage_72121/20160104_Vcholerae_MSHA_10068_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20160104_Vcholerae_MSHA_10068.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-01-04-68/rawdata/20160104_Vcholerae_MSHA_10068.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/21dw2-ybh85
title: P41+P41

description: Raw data files of P41+P41
description: <strong>Tilt Series Date:</strong> 2015-04-18</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 90.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-5/rawdata/</p>atlas10005.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-5/rawdata/atlas10005.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10005_part131_65.rec,  Reconstruction (Pixel Size 1.56 nm), 222.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-5/3dimage_54485/atlas10005_part131_65.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16950190
title: Decadal and multispecies coral connectivity modeling for conservation and restoration prioritization in Florida

description: We simulated the dispersal of coral larvae during the spawning events of 6 species in Florida between 2012 and 2021 using the high-resolution costal ocean model SLIM:



Acropora cervicornis (Acer)

Colpophyllia natans (Cnat)

Diploria labyrinthiformis (Dlab)

Montastraea cavernosa (Mcav)

Orbicella faveolata (Ofav)

Pseudodiploria strigosa (Pstr)


We then computed various connectivity indicator for each simulated spawning event (correspnding to a full moon). These connectivity metrics were also computed for yearly-averaged and species-averaged connectivity matrices.The values of these connectvity indicators is given at each considered reef as shape files, with the following fields:



locRet: local retention

selfRec: self-recruitment

inDeg: in-degree

outDeg: out-degree

propSet: proportion settled

inPgRnk: incoming PageRank

outPgRnk: outgoing PageRank

wInDeg: weighted in-degree

wOutDeg: weighted out-degree


For more details, see:



Dobbelaere, T., Chabotte, R., Figueiredo, J., Holstein, D.M., & Hanert, E. Decadal and multispecies coral connectivity modeling for conservation and restoration prioritization in Florida. Submitted.

Frys, C., Saint-Amand, A., Le Hénaff, M., Figueiredo, J., Kuba, A., Walker, B., ... & Hanert, E. (2020). Fine-scale coral connectivity pathways in the Florida Reef Tract: implications for conservation and restoration. Frontiers in Marine Science, 7, 312. https://doi.org/10.3389/fmars.2020.00312
DOI: 10.5281/zenodo.16950189
title: Decadal and multispecies coral connectivity modeling for conservation and restoration prioritization in Florida

description: We simulated the dispersal of coral larvae during the spawning events of 6 species in Florida between 2012 and 2021 using the high-resolution costal ocean model SLIM:



Acropora cervicornis (Acer)

Colpophyllia natans (Cnat)

Diploria labyrinthiformis (Dlab)

Montastraea cavernosa (Mcav)

Orbicella faveolata (Ofav)

Pseudodiploria strigosa (Pstr)


We then computed various connectivity indicator for each simulated spawning event (correspnding to a full moon). These connectivity metrics were also computed for yearly-averaged and species-averaged connectivity matrices.The values of these connectvity indicators is given at each considered reef as shape files, with the following fields:



locRet: local retention

selfRec: self-recruitment

inDeg: in-degree

outDeg: out-degree

propSet: proportion settled

inPgRnk: incoming PageRank

outPgRnk: outgoing PageRank

wInDeg: weighted in-degree

wOutDeg: weighted out-degree


For more details, see:



Dobbelaere, T., Chabotte, R., Figueiredo, J., Holstein, D.M., & Hanert, E. Decadal and multispecies coral connectivity modeling for conservation and restoration prioritization in Florida. Submitted.

Frys, C., Saint-Amand, A., Le Hénaff, M., Figueiredo, J., Kuba, A., Walker, B., ... & Hanert, E. (2020). Fine-scale coral connectivity pathways in the Florida Reef Tract: implications for conservation and restoration. Frontiers in Marine Science, 7, 312. https://doi.org/10.3389/fmars.2020.00312
DOI: 10.22002/9rbza-z2e86
title: S. aureus

description: Raw data files of S. aureus
description: <strong>Tilt Series Date:</strong> 2017-11-06</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Staphylococcus aureus</p>
<strong>Strain:</strong> subsp. aureus str. Newman</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-51.0°, 50.0°), step: 1.5°, constant angular increment, dosage: 280.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2017-11-06-21/rawdata/</p>Sa_rpsF0021.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2017-11-06-21/rawdata/Sa_rpsF0021.mrc"
        > <i class="download icon"></i> Download </a></p>

        Sa_rpsF0021_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2017-11-06-21/3dimage_90127/Sa_rpsF0021_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/n1wmg-nkn52
title: E. coli EEEE

description: E. coli EEEE, penicillin lysedmotion corrected
description: <strong>Tilt Series Date:</strong> 2015-03-13</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: 7.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-13-17/rawdata/</p>EEEEmot0011.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-13-17/rawdata/EEEEmot0011.mrc"
        > <i class="download icon"></i> Download </a></p>

        EEEEmot0011_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-13-17/3dimage_53250/EEEEmot0011_full.rec"
        > <i class="download icon"></i> Download </a></p>