cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/4sdrf5kfzd
title: Relativistic radial electron density functions and natural orbitals from GRASP2018

description: A new module, RDENSITY, of the GRASP2018 package [1] is presented for evaluating the radial electron density function of an atomic state described by a multiconfiguration Dirac-Hartree-Fock or configuration interaction wave function in the fully relativistic scheme. The present module is the relativistic version of DENSITY [2] that was developed for the ATSP2K package [3]. The calculation of the spin-angular factors entering in the expression of the expectation value of the density operator is performed using the angular momentum theory in orbital, spin, and quasispin spaces, adopting a generalized graphical technique [4]. The natural orbitals (NOs) are evaluated from the diagonalization of the density matrix, taking advantage of its κ-block structure. The features of the code are discussed in detail, focusing on the advantages and properties of the NOs and on the electron radial density picture as a mean for investigating electron correlation and relativistic effects.
DOI: 10.3535/4mb-zk0-8ec
title: †Glassia obovate Sowerby, 1839

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6ka-z8w-b6j
title: Protoheliolites norvegicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19583587.v1
title: Data from questionnaire and interview topic guide

description: Questionnaire and the topic guide for semi structed interviews from 5th yr medical students at University of Birmingham regarding covid related educational changes and their impact
DOI: 10.3535/9xv-7aa-a1e
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dq8-q1l-pbf
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y6t-y0l-58n
title: Catenipora

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/7r7xt6pf6x
title: ROP (retinopathy of prematurity) infants' serum metabolomic data

description: Supplement for paper "comparative analysis unveils changes in serum metabolites and metabolomic networks of retinopathy of prematurity infants"

Please cite our paper if you use this dataset: 
Comparative Analysis Reveals Novel Changes in Plasma Metabolites and Metabolomic Networks of Infants With Retinopathy of Prematurity [J]. IOVS, SCI, 2022, 63(28), doi: 110.1167/iovs.63.1.28.
DOI: 10.17632/dkcrjytvnd
title: Data for: Understanding the structural, dynamic and thermodynamic properties of 5-Nonylsalicylaldoxime: molecular dynamics and experimental studies

description: Supplementary material note Optimized molecular structure of 5-Nonylsalicylaldoxime at 298.15 K (Hydrogen: green, Carbon: cyan, Oxygen: red and Nitrogen: blue) (Fig. S1), A complete list of the force field parameters used in this work (Tables S1 to S5), The change of root mean square displacement, kinetic energy, temperature, pressure, potential energy and total energy for 4 ns NpT simulation at 298.15 K (Fig. S. 2), log(MSD(t)) versus log(t), and β(t) versus time for 512 molecules of NSAO at 308.15 and 318.15 K (Figs. S. 3 and S. 4).
DOI: 10.3535/pda-lhy-d9m
title: †Atrypidae Gill, 1871

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vxs-ye8-jfn
title: Bioerosional trace fossils

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3840988_d2.v1
title: Additional file 2: Table S2. of Long-term prenatal exposure to paracetamol is associated with DNA methylation differences in children diagnosed with ADHD

description: Significantly methylated CpGs between long-term exposed samples with ADHD and sporadically exposed samples with ADHD. (XLSX 585Â kb)
DOI: 10.3535/g7c-e57-8fc
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w5s-ax3-l7f
title: †Zygospira Hall, 1862

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28517615.v2
title: <b>Consent Form and Robotfoto</b>

description: Consent Form and Robotfoto
DOI: 10.3535/91p-ykp-sb6
title: Dayia J. M. Porter

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ac3-6w3-2tq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11369979.v1
title: RNA-seq transcriptome of Pseudomonas putida KT2440 subsisting on fructose as sole carbon source

description: Fructose is a metabolizable sugar that is able to tap on central carbon metabolism for its catabolism. But, fructose is not commonly used as a substrate for cultivating cells in biotechnology applications. In this contribution, the RNA-seq of <i>Pseudomonas putida</i> KT2440 (ArrayExpress accession number: E-GEOD-46491) subsisting on fructose as sole carbon source was analysed by an in-house MATLAB transcriptome analysis software. A total of 0.7 million reads were analysed, and the resulting transcriptome paints a picture of a cell devoting significant metabolic resources in expressing cell surface proteins. Specifically, the highly expressed genes were: putative surface adhesion protein, surface adhesion protein, ribosome modulation factor, quinoprotein ethanol dehydrogenase, flagellin, porin F, major outer membrane lipoprotein, non-ribosomal peptide synthetase, and basic amino acid specific porin OprD. High expression level of a fructose transporter, PTS fructose transporter subunit EI/HPr/IIA, fruB, indicated that <i>P. putida</i> KT2440 could sense presence of fructose, and activate a differential gene expression programme centred around the fructose regulon. Overall, the RNA-seq transcriptome presented in this work should find use in fundamental biology studies seeking to understand bacterial fructose metabolism in general, and how <i>P. putida</i> KT2440 uses this non-conventional sugar in particular.<br><br>
DOI: 10.6084/m9.figshare.12652100.v5
title: Global surface ocean pCO2 from CSIR-ML6 (v2020)

description: An update to the original CSIR-ML6 method. The following changes have been made: SOCATv2020 is used; ERA5 wind data and MSLP are used (instead of ERA interim).<br><b>spco2</b> = surface pCO2 for the ensemble average<b>spco2_ensemble</b> = individual ensemble members of spco2<b>fgco2</b> = air-sea CO2 fluxes <b>area_mask</b> = the area per pixel - doubles as mask for the data<br>Please cite the dataset as well as the original publication (https://doi.org/10.5194/gmd-12-5113-2019).
DOI: 10.3535/c4w-fqj-4le
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q1r-8fy-q43
title: †Glassia Davidson, 1881

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/2dvn2d6884
title: Profile: A code for evaluating line profile shapes for optically thick expanding plasmas

description: Title of program: PROFILE Catalogue Id: AARK_v1_0 Nature of problem The shape of a spectral line profile emitted from a plasma can be a sensitive indicator of the parameters of the plasma. Traditionally, optically thin profiles have been used for plasma measurements, but optically thick profiles are now increasingly being investigated as diagnostics for dense (e.g. laser-produced plasmas) or large (e.g. the solar corona) plasmas. CORRECTION SUMMARY: Vol:Year:Page 0:unpublished:unpublished "000ACORRECTION 09/01/91" "Unpublished correction to PROFILE: a code for evaluating line profile shapes for optically thick expanding plasmas." G.J. Tallents Note: correction instructions are contained in source code Versions of this program held in the CPC repository in Mendeley Data AARK_v1_0; PROFILE; 10.1016/0010-4655(82)90030-3 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/93g8gmsvnt
title: Microstructural alterations in the locus coeruleus-entorhinal cortex pathway in Alzheimer’s disease and frontotemporal dementia

description: INTRODUCTION: We investigated in-vivo the microstructural integrity of the pathway connecting the locus coeruleus to the transentorhinalcortex (LC-TEC) in patients with Alzheimer’s disease (AD) and frontotemporal dementia (FTD). 
METHODS: Diffusion-weighted MRI scans we recollected for 21 AD, 20 behavioral variants of FTD (bvFTD), and 20 controls. Fractional anisotropy (FA), mean, axial, and radial diffusivities (MD,AxD,RD) were computed in the LC-TEC pathway using a normative atlas. Atrophy was assessed using cortical thickness and correlated with microstructural measures.
RESULTS: We found (i) higher RD in AD than controls; (ii) higher MD, RD, and AxD, and lower FA in bvFTD than controls and AD; and (iii) a negative association between LC-TEC MD, RD, and AxD, and entorhinal cortex (EC) thickness in bvFTD (all p&lt;0.050).
DISCUSSION: LC-TEC microstructural alterations are more pronounced in bvFTD than AD, possibly reflecting neurodegeneration secondary to EC atrophy.
DOI: 10.17632/k6jnkjbd8k
title: Centromere/kinetochore is assembled through CENP-C oligomerization. Hara et al

description: The kinetochore is an essential protein complex required for accurate chromosome segregation. The constitutive centromere-associated network (CCAN), a subcomplex of the kinetochore, associates with centromeric chromatin and provides a platform for the kinetochore assembly. The CCAN protein CENP-C is thought to be a central hub for the centromere/kinetochore organization. However, the role of CENP-C in CCAN assembly needs to be elucidated. Here, we demonstrate that both the CCAN-binding domain and the C-terminal region that includes the Cupin domain of CENP-C are necessary and sufficient for chicken CENP-C function. Structural and biochemical analyses reveal self-oligomerization of the Cupin domains of chicken and human CENP-C. We find that the CENP-C Cupin domain oligomerization is vital for CENP-C function, centromeric localization of CCAN, and centromeric chromatin organization. These results suggest that CENP-C facilitates the centromere/kinetochore assembly through its oligomerization.
DOI: 10.3535/7ze-m8m-j2l
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tma-p22-xhx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.4902155.v1
title: FS881 contigs and profile databases

description: anvi'o contigs database and profile database for sample FS881 from the Mid-Cayman Rise. See project description for instructions.
DOI: 10.6084/m9.figshare.4978166.v2
title: Mangroves Species Occurrence Data in Central Cebu, Philippines

description: The specifies the coordinates of the different mangroves species found in Central Cebu, Philippines.<br>
DOI: 10.17632/sm7nd834d5
title: An high performance Fortran implementation of a Tight-Binding Molecular Dynamics simulation

description: Abstract Molecular Dynamics simulations in the Tight-Binding approach allow the study of the ionic and electronic structures of semiconductors. The Tight-Binding codes are characterized by inhomogeneous data distribution and require the repeated diagonalization of a large sparse matrix to compute the whole body of its eigenvalues and eigenvectors. We describe the porting of this code on a parallel computer: we show the parallelization strategy for both the Molecular Dynamics part of the code and for t... Title of program: mdprs Catalogue Id: ADKP_v1_0 Nature of problem The parallel code simulates, using the Tight-Binding Molecular Dynamics technique, the atomistic evolution of semiconductor materials in several thermodynamic environments. Versions of this program held in the CPC repository in Mendeley Data ADKP_v1_0; mdprs; 10.1016/S0010-4655(99)00251-9 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.3535/nhp-4px-wh2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x3v-kvb-r6x
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28603430.v1
title: Rader and Matute. Animal Behaviour 2025

description: This package includes all the data to reproduce the analyses and figures in Matute and Rader 2025.
DOI: 10.3535/a3a-g90-ds7
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v68-13d-5k9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24159606.v1
title: Genetic architect of dancing gait characteristic of Nachi goat breed

description: Genetic architect of dancing gait characteristic <b>OF</b> Nachi goat breed
DOI: 10.17632/8hshj3bxcm
title: Data used in 2021

description: The data cover the period between 1 January 2020 and 17 September 2021. Time variant variables include total deaths per million population, total tests per million population, the share of tests that are positive, and the stringency index. Time-invariant variables include press freedom index (2020), the score of government cohesion (2019), domestic private health expenditure (% of current expenditure) (2017), domestic private health expenditure per capita, PPP (current international $) (2017), and GDP per capita (2010 US$) (2017), and Human Development index (2019).
DOI: 10.3535/7gt-sc1-5rr
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zlj-9l5-jg8
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20180440.v1
title: Documenting occupant models for building performance simulation: a state-of-the-art

description: The number of occupancy and occupant behaviour models developed for building performance simulation (BPS) has steadily increased for the past four decades. However, their use is still limited in practice. This is partly due to the difficulty in understanding their utility and to the challenges related to their implementation into BPS. Both problems can be attributed to the lack of a framework for their description and communication. In this paper, we fill this gap by introducing a framework to document occupant models, that represents the state-of-the-art of available information on the topic. The framework consists of four blocks (description, development, evaluation, and implementation) and can also be regarded as a guideline to help researchers communicate their models transparently. Based on a systematic review, we verify to which degree existing academic papers on occupant models meet the framework, thus providing a self-critical assessment of the state-of-the-art of occupant models’ documentation.
DOI: 10.6084/m9.figshare.6400742.v1
title: Quality Assurance Report

description: Sarojini Naidu Government Girls Post Graduate (Autonomous) College, popularly known as Nutan College, with a brilliant record of 45 years, has been an exemplar of creativity and quality sustenance. Owing to its excellence in curricular, co-curricular and extra-curricular activities, the College stands tall among equals. Acclaimed as one of the best institutes of the state, the College fetched autonomy by UGC and Government of M.P. in 1995-96. Since then, it has made a phenomenal progress in all academic and allied pursuits.Objectives of IQAC The tenets customized by the Internal Quality Assurance Cell, as decided during One Week Training Program on ‘Quality Sustenance & Faculty Development’ 2015-16, are as follows :• Construction of bench marks through conscious, catalytic & consistent efforts.• Enhancement in the academic & administrative performance of the institution.• Promotion of Quality Circle (through Conferences, Webinars, Workshops).• Creation of learner-centric environment.• Adoption of interactive & participatory teaching - learning methods.• Preference to innovative & entrepreneurial approaches.• Amalgamation of competent learning & skills.• Inculcation of value system.• Orientation of faculty towards more & more use of IT.• Consolidation of management information system (MIS).• Promotion of interdisciplinary research.• Networking in neighborhood.• Linkages & collaborations with equals & others.• Institutionalization of best practices.• Recognition as a harbinger of change.• Development of a strong feedback mechanism from all stakeholders (Students, Parents, Hostellers, Alumni, Society, Employer, Teachers of eminence, etc.)
DOI: 10.17632/hnyrvgd6zy
title: Data for: Slope, elevation, and thermal inertia trends of martian recurring slope lineae initiation and termination points: multiple possible processes occurring on coarse, sandy slopes

description: This file contains supplementary figures as well as a description of datasets and code developed for this project. Section 1 is full elevation, slope, orientation, and thermal inertia histograms for all studied sites. Section 2 is a description of data and Matlab code.
DOI: 10.3535/jw1-dqh-0lz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/knz-6gh-jbv
title: Bioturbation trace fossils

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.4121/21550833.v1
title: Physiological characteristics and performance of a world-record breaking tower runner

description: Tower running case study involving lab and field testing.
DOI: 10.3535/3fv-a7p-e48
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mll-kkg-2s9
title: †Glassia Davidson, 1881

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1nz-j9q-z4h
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c97-v8v-zmt
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14976747.v3
title: Supplementary Data File 5

description: Extended Data Fig. 4-5 Module Detection Results. Overlap of known per-module-optimized clusters obtained from the <strong>Fig. 2, 3</strong> input networks and integration methods, with IntAct Complex, KEGG Pathway and GO Biological Process modules.
DOI: 10.3535/3cq-ad8-qw2
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kxk-exa-yhp
title: †Glassia Davidson, 1881

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19586401.v1
title: MetaData

description: MetaData key for remaining data in this project.
DOI: 10.3535/rp7-lkl-yf9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vb8-r4v-bth
title: †Glassia Davidson, 1881

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1gq-cbd-yd9
title: Propora speciosa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6z3-pdy-aj7
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/yxy4sskkm2
title: ROP

description: ROP case control study
DOI: 10.3535/kev-het-r4x
title: Paleofavosites abstrusus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/eja-ngt-erl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nkb-scq-3cz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/dkmd224gbz
title: Childhood Trauma and Dyadic Coping on Married Individuals in Indonesia

description: The questionnaires were distributed among 566 married individuals in Indonesia. This dataset contains data about childhood trauma and dyadic coping. Dyadic coping consist of nine dimensions including stress communicated by oneself (SCO), supportive dyadic coping by oneself (SDCO), delegated dyadic coping by oneself (DDCO), negative dyadic coping of oneself (NDCO), stress communication of the partner (SCP), supportive dyadic coping of the partner (SDCP), delegated dyadic coping of the partner (DDCP), negative dyadic coping by partner (NDCP), and common dyadic coping (CDC). The database provides valuable information about childhood trauma mapping distributions in Indonesia and can be used to find correlations between childhood trauma and dyadic coping in married individuals.
DOI: 10.17632/wzy67jd56d
title: A brute-force code searching for cell of non-identical displacement for CSL grain boundaries and interfaces

description: Atomic simulation of coincidence-site lattice (CSL) grain boundaries (GBs) and interfaces is of importance for understanding GBs in polycrystalline materials and for making functional films. A common process of high-throughput simulation for CSL GBs and interfaces is to explore rigid body translation (RBT) of one crystal respect to the other. Cell of non-identical displacement (CNID) is the minimum cell including all non-identical RBTs in the GB or interface plane and is important for effective sampling. This work proposes an algorithm to compute the CNID of any two-dimensional CSL GB or interface based on a reciprocity relation between the displacement shift complete (DSC) and CSL.
DOI: 10.3535/avv-vb9-s9f
title: Dayia J. M. Porter

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/azq-rl4-y3w
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.