cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7895745
title: Processed Vectra images for primary central nervous system lymphoma (PCNSL) patients

description: FFPE materials Formalin-fixed paraffin-embedded (FFPE) tumor samples and clinical data were obtained from PCNSL patients enrolled in the HOVON105/ALLG NHL 24 intergroup, multicenter, open-label, randomized phase 3 study (NTR2437 and ACTRN12610000908033) through the HOVON Pathology Facility and Biobank. Muiltiplex imaging Multiplex immunofluorescence was performed on 4-µm-thick formalin-fixed, paraffin-embedded whole tissue sections using the Opal 7-color fluorescence immunohistochemistry (IHC) kit (Akoya biosciences, USA), as previously described. In brief, slides were deparaffinized and rehydrated, followed by a blocking step for endogenous peroxidase using 0.3% H<sub>2</sub>O<sub>2</sub>/methanol and fixation with 10% neutral buffered formalin (Leica Biosystems, Germany). Slides were washed in Milli-Q water and 0.05% Tween20 in 1x Tris-Buffered Saline (TBS-T). Antigen retrieval was done by placing the slides in 0.05% ProClin300/Tris–EDTA buffer pH 9.0 in a microwave at 100% power until boiling, followed by 15 min at 30% power. Slides were cooled in Milli-Q water, washed in 1x TBS-T and blocked with Antibody Diluent (Agilent, USA). The slides were then incubated with primary antibody diluted in Normal Antibody Diluent, followed by incubation with the broad spectrum HRP from the SuperPicture Polymer Detection Kit (Life Technologies, USA). Next, the slides were incubated with Opal TSA fluorochromes diluted in an amplification buffer (Akoya biosciences, USA). The primary and secondary antibody complex was stripped by microwave treatment with 0.05% ProClin300/Tris–EDTA buffer at pH 9.0. Finally, DAPI working solution (Akoya biosciences, USA) was applied and the slides were mounted with Prolong Diamond Anti-fade mounting medium (#P36965; Life Technologies). Image processing Stained slides were scanned using the Vectra Polaris Automated Quantitative Pathology Imaging System (Akoya biosciences, USA). From each slide, representative tumor regions and regions at the junction of tumor and surrounding cerebral tissue were selected and multispectral imaging (MSI) images were acquired at 40x resolution. After image capture, the images were spectrally unmixed and analyzed, using supervised machine learning algorithms within Inform 4.2.2. (Akoya biosciences). Cells were assigned into ten different phenotype categories: “PAX5+PD-L1-”, “PAX5+PD-L1+”, “CD163+PD-L1-”, “CD163+PD-L1+”, “CD3+CD8-PD-1-”, “CD3+CD8+PD-1-”, “CD3+CD8-PD-1+”, “CD3+CD8+PD-1+”, “other PD-L1+” or “other”, based on the size of the cells and positivity of markers in the panel.
DOI: 10.5281/zenodo.7895744
title: Processed Vectra images for primary central nervous system lymphoma (PCNSL) patients

description: FFPE materials Formalin-fixed paraffin-embedded (FFPE) tumor samples and clinical data were obtained from PCNSL patients enrolled in the HOVON105/ALLG NHL 24 intergroup, multicenter, open-label, randomized phase 3 study (NTR2437 and ACTRN12610000908033) through the HOVON Pathology Facility and Biobank. Muiltiplex imaging Multiplex immunofluorescence was performed on 4-µm-thick formalin-fixed, paraffin-embedded whole tissue sections using the Opal 7-color fluorescence immunohistochemistry (IHC) kit (Akoya biosciences, USA), as previously described. In brief, slides were deparaffinized and rehydrated, followed by a blocking step for endogenous peroxidase using 0.3% H<sub>2</sub>O<sub>2</sub>/methanol and fixation with 10% neutral buffered formalin (Leica Biosystems, Germany). Slides were washed in Milli-Q water and 0.05% Tween20 in 1x Tris-Buffered Saline (TBS-T). Antigen retrieval was done by placing the slides in 0.05% ProClin300/Tris–EDTA buffer pH 9.0 in a microwave at 100% power until boiling, followed by 15 min at 30% power. Slides were cooled in Milli-Q water, washed in 1x TBS-T and blocked with Antibody Diluent (Agilent, USA). The slides were then incubated with primary antibody diluted in Normal Antibody Diluent, followed by incubation with the broad spectrum HRP from the SuperPicture Polymer Detection Kit (Life Technologies, USA). Next, the slides were incubated with Opal TSA fluorochromes diluted in an amplification buffer (Akoya biosciences, USA). The primary and secondary antibody complex was stripped by microwave treatment with 0.05% ProClin300/Tris–EDTA buffer at pH 9.0. Finally, DAPI working solution (Akoya biosciences, USA) was applied and the slides were mounted with Prolong Diamond Anti-fade mounting medium (#P36965; Life Technologies). Image processing Stained slides were scanned using the Vectra Polaris Automated Quantitative Pathology Imaging System (Akoya biosciences, USA). From each slide, representative tumor regions and regions at the junction of tumor and surrounding cerebral tissue were selected and multispectral imaging (MSI) images were acquired at 40x resolution. After image capture, the images were spectrally unmixed and analyzed, using supervised machine learning algorithms within Inform 4.2.2. (Akoya biosciences). Cells were assigned into ten different phenotype categories: “PAX5+PD-L1-”, “PAX5+PD-L1+”, “CD163+PD-L1-”, “CD163+PD-L1+”, “CD3+CD8-PD-1-”, “CD3+CD8+PD-1-”, “CD3+CD8-PD-1+”, “CD3+CD8+PD-1+”, “other PD-L1+” or “other”, based on the size of the cells and positivity of markers in the panel.
DOI: 10.6084/m9.figshare.23515623
title: COG-AP_original1309benchmark

description: Tidied absence-presence data of curated, final list of 89 tRNA modification related COGs.
DOI: 10.6084/m9.figshare.23515623.v1
title: COG-AP_original1309benchmark

description: Tidied absence-presence data of curated, final list of 89 tRNA modification related COGs.
DOI: 10.5281/zenodo.8038909
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by George Bentham, http://www.wikidata.org/entity/Q731808. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q731808
DOI: 10.5281/zenodo.8038908
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by George Bentham, http://www.wikidata.org/entity/Q731808. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q731808
DOI: 10.5281/zenodo.8038911
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Bjørn Berdal, http://www.wikidata.org/entity/Q108821996. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q108821996
DOI: 10.5281/zenodo.8038910
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Bjørn Berdal, http://www.wikidata.org/entity/Q108821996. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q108821996
DOI: 10.6084/m9.figshare.23043407
title: database_v1.tar.gz

description: test
DOI: 10.6084/m9.figshare.23043407.v1
title: database_v1.tar.gz

description: test
DOI: 10.5281/zenodo.7729444
title: Chapter 29. Supplementary material. Remote sensing of invasive Australian Acacia species: State of the art and future perspectives

description: This is online supplementary material for the Chapter "Remote sensing of invasive Australian Acacia species: State of the art and future perspectives" authored by A Große-Stoltenberg, I Lizarazo, G Brundu, VP Gonçalves, LP Osco, C Masemola, J Müllerová, C Werner, I Kotze, and J Oldeland, corresponding to Chapter 29 In: "Wattles: Australian Acacia species around the world". Eds: D.M. Richardson, J.J. Le Roux, and E. Marchante (CABI, UK, 2023).”
DOI: 10.5281/zenodo.7729445
title: Chapter 29. Supplementary material. Remote sensing of invasive Australian Acacia species: State of the art and future perspectives

description: This is online supplementary material for the Chapter "Remote sensing of invasive Australian Acacia species: State of the art and future perspectives" authored by A Große-Stoltenberg, I Lizarazo, G Brundu, VP Gonçalves, LP Osco, C Masemola, J Müllerová, C Werner, I Kotze, and J Oldeland, corresponding to Chapter 29 In: "Wattles: Australian Acacia species around the world". Eds: D.M. Richardson, J.J. Le Roux, and E. Marchante (CABI, UK, 2023).”
DOI: 10.5281/zenodo.8038826
title: Chapter 29. Supplementary material. Remote sensing of invasive Australian Acacia species: State of the art and future perspectives

description: This is online supplementary material for the Chapter "Remote sensing of invasive Australian Acacia species: State of the art and future perspectives" authored by A Große-Stoltenberg, I Lizarazo, G Brundu, VP Gonçalves, LP Osco, C Masemola, J Müllerová, C Werner, I Kotze, and J Oldeland, corresponding to Chapter 29 In: "Wattles: Australian Acacia species around the world". Eds: D.M. Richardson, J.J. Le Roux, and E. Marchante (CABI, UK, 2023).”
DOI: 10.5281/zenodo.8038929
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Rolf Yngvar Berg, http://www.wikidata.org/entity/Q7360815. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q7360815
DOI: 10.5281/zenodo.8038928
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Rolf Yngvar Berg, http://www.wikidata.org/entity/Q7360815. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q7360815
DOI: 10.5281/zenodo.8038937
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Sven Berggren, http://www.wikidata.org/entity/Q2600462. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q2600462
DOI: 10.5281/zenodo.8038963
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Dominik Bilimek, http://www.wikidata.org/entity/Q1237750. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q1237750
DOI: 10.5281/zenodo.8038967
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Hélène Bischler, http://www.wikidata.org/entity/Q21391427. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q21391427
DOI: 10.5281/zenodo.8038966
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Hélène Bischler, http://www.wikidata.org/entity/Q21391427. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q21391427
DOI: 10.25549/whit-c170-54863
title: Mt. Rainier, 14,408 feet - near Tacoma, Narada Falls, 268 feet high, WA, 1932

description: 4 photographs of Mt. Rainier, 2 photographs of Narada Falls, WA, 1932. "Subject: Mt Rainier, 14,408 feet - Near Tacoma, Wash[ington], Narada Falls 268 feet high; Agency: L & T, Philippi; Client: Union Oil Co.; D - misc[el]l[aneous]; Re-order: 1#5, 1-#2. 1 ea[ch] 15, 1 ea[ch] #2,4, 1#2; Size: 11x14, 10x13, contact, 8x10, 4x5; Finish: Opal B; Mount: to be m[oun]t[e]d; Job: 11-28-177; Year: 1932" -- on envelope front. Original Photographs--Size: charged on 11-28-156, 1932" -- on envelope back.
DOI: 10.15468/dl.8nwa9g
title: Occurrence Download

description: A dataset containing 29300 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hydnaceae"
 ]
}

 The dataset includes 29300 records from 162 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090526-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b88tsx
title: Occurrence Download

description: A dataset containing 1396 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Celtis tala Gillies ex Planch."
 ]
}

 The dataset includes 1396 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006023-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-105853
title: Christmas groups, Los Angeles, Calif., 1940

description: 15 photographs of models engaged in USA Christmas traditions, Los Angeles, California, 1940 October 12. The activities include: carrying gifts, decorating a Christmas tree, putting gifts under the tree, children holding their new toys and opening gifts, and looking through a wreath.
DOI: 10.15468/dl.5zkau6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Cordia"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006024-240506114902167/datasets/export for details.
DOI: 10.15468/dl.dtfwt0
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lophozia latifolia R.M.Schust.",
 "Geometry POLYGON((39.726562 44.339565,29.882812 32.249974,18.28125 34.016241,10.546875 36.597889,5.273437 37.996162,-3.164062 36.031331,-16.523437 29.535229,-31.640625 34.597041,-40.78125 50.064191,-35.507812 65.512962,-12.304687 71.635992,11.953125 81.972431,37.265625 83.068774,59.765625 82.494823,77.343749 81.308320,82.96875 80.872827,80.859374 78.767791,63.984375 70.377853,66.445312 69.534517,63.28125 61.606396,39.726562 44.339565))"
 ]
}

 The dataset includes 14 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090530-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-105602
title: [Shriners event at Los Angeles Memorial Coliseum], Los Angeles, Calif., 1938

description: 46 photographs of the Shriners convention at the Los Angeles Memorial Coliseum, Los Angeles, California, 1938 June. There are parade floats representing contingents of Shriners from different parts of the USA, clown cars, officials, bands, cannons, automobiles, a military group, and behind-the-scenes areas of the Coliseum. One photograph shows officials on a stand speaking into a microphone from Radio Station KEHE. Editor's note: the photographer's job number does not specify a date for this event. The Shriners convention lasted from June 7 through June 9.
DOI: 10.25549/whit-c170-103928
title: Florida & Texas, 1940

description: 27 photographs of Arizona, Texas and Florida, 1940 September 1. These include Randolph Field (Texas), ice being loaded onto Pullman cars in Yuma, Arizona; Hollywood and Pensacola, Florida, beaches in Florida, railroad tracks and stations, the Alamo in Texas, and indigenous people selling wares in Yuma. "Subject: Florida & Texas." "Year: 1940; Job no. C9-1-16" -- on envelope front. Handwritten notes on several negatives read, "Florida Bayou," and one has "From good hotel, Miami Beach." Notes on the negative envelope indicate that there were 9 print orders for various negatives fulfilled by the Whittington Studio, and reproduction rights were sold 4 times for 3 of the negatives.
DOI: 10.15468/dl.lols6t
title: Occurrence Download

description: A dataset containing 5698 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pecten maximus (Linnaeus, 1758)"
 ]
}

 The dataset includes 5698 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090532-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-105596
title: [Shriners event at Los Angeles Memorial Coliseum], Los Angeles, Calif., 1938

description: 46 photographs of the Shriners convention at the Los Angeles Memorial Coliseum, Los Angeles, California, 1938 June. There are parade floats representing contingents of Shriners from different parts of the USA, clown cars, officials, bands, cannons, automobiles, a military group, and behind-the-scenes areas of the Coliseum. One photograph shows officials on a stand speaking into a microphone from Radio Station KEHE. Editor's note: the photographer's job number does not specify a date for this event. The Shriners convention lasted from June 7 through June 9.
DOI: 10.15468/dl.ud85aj
title: Occurrence Download

description: A dataset containing 237 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Reseda scoparia Brouss. ex Willd."
 ]
}

 The dataset includes 237 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090535-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-105538
title: [Shriners event at Los Angeles Memorial Coliseum], Los Angeles, Calif., 1938

description: 8 photographs of equestrians, Spanish dancers, and a marching band, as well as a view of the Coliseum from a top level at the Shriners convention at the Los Angeles Memorial Coliseum, Los Angeles, California, 1938 June. Editor's note: the photographer's job number does not specify a date for this event, but the Shriners convention lasted from June 7 through June 9.
DOI: 10.25549/whit-c170-105727
title: [Desert and geologic formations], California, 1938

description: 9 photographs of desert and geologic formations from different angles, California, 1938 June.
DOI: 10.15468/dl.1lwzac
title: Occurrence Download

description: A dataset containing 297499 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aquila Brisson, 1760",
 "Geometry POLYGON((-87.890625 -0.703107,-49.21875 27.683528,-47.109375 59.175928,-67.5 74.775843,-165.9375 74.775843,-185.625 48.922499,-87.890625 -0.703107))"
 ]
}

 The dataset includes 297499 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090539-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-69543
title: South Coast Land Co., Del Mar, CA, 1927

description: 6 photographs of people and houses, Del Mar, CA, 1927. "77-24-68; 1927; South Coast Land Co[mpany]; Del Mar; San Diego County" -- on envelope.
DOI: 10.25549/whit-c170-101048
title: Dogs at city pound, Los Angeles, Calif., 1939

description: 6 photographs, 5 of dogs, and one goat, in the local animal shelter, Los Angeles, California, 1939 December.
DOI: 10.15468/dl.ak7too
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callithrix jacchus jacchus",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 12 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090542-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v7mwx6
title: Occurrence Download

description: A dataset containing 155915 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tyto alba (Scopoli, 1769)"
 ]
}

 The dataset includes 155915 records from 375 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090550-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-101090
title: Salesman, Los Angeles [?], Calif., 1939

description: 4 photographs of a man in a suit selling his wares on a sidewalk, 2 with people around him, probably in Los Angeles, California, 1939 December. The same two that have people around the salesman have masking tape indicating the main area of focus in the middle of the images.
DOI: 10.15468/dl.y23e4o
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pipile cumanensis cumanensis"
 ]
}

 The dataset includes 77 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090552-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-101213
title: Trav-L-Lab for international news at Rose Bowl game, Pasadena, Calif., 1939

description: 7 photographs of the Whittington Trav-L-Lab in use at a Rose Bowl game, using a wirephoto machine to transmit photographs from film developed on site in the vehicle's "lab," using a regular long-distance telephone line, Pasadena, California, 1939 December. Editor's note: the photographer's job number indicates December 1939, but the Rose Bowl games are only held on New Year's Day. The date has not been corrected because it is possible this is a rehearsal or a set of publicity photographs.
DOI: 10.15468/dl.gucjkk
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pipile cumanensis grayi (Pelzeln, 1870)"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090554-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-101132
title: Grace Wiley Zoo, Long Beach, Snakes, Cypress, Calif., 1939

description: 4 photographs: Grace Olive Wiley holding a tortoise, a man with a reticulated python wrapped around him, and a monitor lizard, Cypress, California, 1939 December.
DOI: 10.25549/whit-c170-105721
title: [Johannesburg], Calif., 1938

description: 4 photographs of a town with a distant view of vegetation, mountains, and a small group of houses in the middle, Johannesburg, California, 1938 June. One building with a legible sign is "Tom's Place."