cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2h52b3
title: CCDC 2298784: Experimental Crystal Structure Determination

description: Related Article: Evangelos Pilichos, Mercè Font-Bardia, Gabriel Aullón, Júlia Mayans, Albert Escuer|2024|Inorg.Chem.|63|20415|doi:10.1021/acs.inorgchem.4c02826
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h52c4
title: CCDC 2298785: Experimental Crystal Structure Determination

description: Related Article: Evangelos Pilichos, Mercè Font-Bardia, Gabriel Aullón, Júlia Mayans, Albert Escuer|2024|Inorg.Chem.|63|20415|doi:10.1021/acs.inorgchem.4c02826
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h52d5
title: CCDC 2298786: Experimental Crystal Structure Determination

description: Related Article: Evangelos Pilichos, Mercè Font-Bardia, Gabriel Aullón, Júlia Mayans, Albert Escuer|2024|Inorg.Chem.|63|20415|doi:10.1021/acs.inorgchem.4c02826
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hsz5g
title: CCDC 2317906: Experimental Crystal Structure Determination

description: Related Article: Ming Hu, Feng-Ying Ye, Wei Yu, Kang Sheng, Zhi-Rong Xu, Jin-Jin Fu, Xin Wen, Hai-Tao Feng, Minghua Liu, Yan-Song Zheng|2024|Chemical Science|15|16627|doi:10.1039/D4SC03599B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k7f9k
title: CCDC 2360628: Experimental Crystal Structure Determination

description: Related Article: Chiliveru Priyanka, Desagoni Madhu, Palivela Siva Gangadhar, Lingamallu Giribabu, Nagender Punna|2024|Chem.Commun.|60|12233|doi:10.1039/D4CC03953J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kbkr7
title: CCDC 2363649: Experimental Crystal Structure Determination

description: Related Article: Phoebe R. Hertler, Arturo Sauza-de la Vega, Andrea Darù, Arup Sarkar, Richard A. Lewis, Guang Wu, Laura Gagliardi, Trevor W. Hayton|2024|Chemical Science|15|16559|doi:10.1039/D4SC04880F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k63yv
title: CCDC 2359377: Experimental Crystal Structure Determination

description: Related Article: Anamar Blanes-Díaz, Jennifer N. Wacker, Jennifer E. S. Szymanowski, Jeffery A. Bertke, Karah E. Knope|2024|Chem.Commun.|60|12185|doi:10.1039/D4CC03144J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k640y
title: CCDC 2359379: Experimental Crystal Structure Determination

description: Related Article: Anamar Blanes-Díaz, Jennifer N. Wacker, Jennifer E. S. Szymanowski, Jeffery A. Bertke, Karah E. Knope|2024|Chem.Commun.|60|12185|doi:10.1039/D4CC03144J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k7btz
title: CCDC 2360551: Experimental Crystal Structure Determination

description: Related Article: Yue Wu, Xin Zhang, Bo Zhang, Liu-Di Xin, Xiao-Meng Zhen, Liang-Jin Xu|2024|J.Mater.Chem.C|12|16471|doi:10.1039/D4TC03040K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l1bxx
title: CCDC 2384579: Experimental Crystal Structure Determination

description: Related Article: Viqqi Kurnianda, Hao-Chun Hu, Ping-Jyun Sung, Yasuhiro Hayashi, Kanami Mori-Yasumoto, Ayumi Suetake, Hikari Nakayama, Mina Yasumoto-Hirose, Yuna Tsutsumi, Genta Koja, Yu-Chi Tsai, Takahiro Jomori, Junichi Tanaka|2024|Tetrahedron Lett.|151|155323|doi:10.1016/j.tetlet.2024.155323
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l431x
title: CCDC 2387218: Experimental Crystal Structure Determination

description: Related Article: Yi-Ting Shen, Yan Zhang, Cheng-Long Ji, Cong-Yu Zhang, Xiang Wang, Man-Su Tu, Bo Jiang, Wen-Juan Hao|2024|J.Org.Chem.|89|15447|doi:10.1021/acs.joc.4c01308
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.3fmczv
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Guatemala",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Atta cephalotes (Linnaeus, 1758)"
 ]
}

 The dataset includes 32 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013034-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69nd4u
title: Occurrence Download

description: A dataset containing 3429 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Triolena Naudin"
 ]
}

 The dataset includes 3429 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013035-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3vm5eu
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Fossa fossana (Müller, 1776))"
 ]
}

 The dataset includes 126 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013037-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mzgnvt
title: Occurrence Download

description: A dataset containing 2420 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Coccoloba mollis Casar., Coccoloba paniculata Meisn., Coccoloba polystachya Wedd.)"
 ]
}

 The dataset includes 2420 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013036-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5mk65m49
title: MassIVE MSV000096408 - Exometabolomics of freshwater phytoplankton _ POS Mode
title: Exometabolomics of freshwater phytoplankton grown on COMBO medium. Measurements were performed in positive mode using LCMS as described previously. (Haavisto et al. Msystems 2024)
DOI: 10.15468/dl.cf47c2
title: Occurrence Download

description: A dataset containing 2394 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polioptila caerulea caerulea"
 ]
}

 The dataset includes 2394 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013038-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjvm43
title: Occurrence Download

description: A dataset containing 36515 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Taxon occurrence data for the FungalRoot database"
 ]
}

 The dataset includes 36515 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013039-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pfgjt9
title: Occurrence Download

description: A dataset containing 12689 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((30.55172 50.55977,30.58067 50.56897,30.60962 50.59103,30.69068 50.6094,30.70226 50.63879,30.69358 50.66816,30.71674 50.69751,30.67621 50.70851,30.68779 50.76348,30.73121 50.77629,30.71963 50.82021,30.75148 50.84033,30.7949 50.85129,30.82386 50.88236,30.84412 50.94807,30.88755 50.95718,30.88465 51.01915,30.84412 51.05374,30.86439 51.07921,30.90781 51.09012,30.91939 51.13737,30.91939 51.1755,31.02505 51.22545,30.66213 51.34445,30.58657 51.30229,30.56498 51.24996,30.5272 51.2263,30.55418 51.16035,30.58926 51.11971,30.60815 51.08243,30.59466 51.03833,30.57037 51.00438,30.59196 50.95681,30.56259 50.9109,30.58324 50.89209,30.58783 50.84287,30.56259 50.82259,30.55801 50.75443,30.53736 50.7254,30.5236 50.66438,30.52589 50.62947,30.55112 50.59453,30.55172 50.55977))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 12689 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013040-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15758304
title: Data from: 'Dispersification' of Agalinis (Orobanchaceae) into South America is associated with hummingbird pollination and perennial life history shifts.

description: Aim: Several mechanisms contribute to the plant biodiversity of the Neotropics, with the highlands of South America serving as important hotspots of diversity. In particular, the Brazilian highlands exhibit high biodiversity due to complex diversification dynamics and a mixture of contributions from different biomes. In this study, we reconstruct the timing and potential triggers of diversification of Agalinis, hemiparasitic plants that inhabit open grassland habitats, to investigate their biogeographic history and migration patterns across the Americas.

Location: North, Central, and South America

Taxon: Agalinis.

Methods: We reconstructed dated phylogenies of Agalinis using a secondary calibration approach, sampling 73% of the known species, including multiple species from the Andes and Brazilian highlands. We inferred ancestral distributions to understand migration patterns between North and South America and within South America. Additionally, we investigated shifts in diversification rates within the genus and reconstructed ancestral pollination syndrome and life history strategy states. All analyses were performed across a distribution of trees to account for phylogenetic uncertainty.

Results: Agalinis likely originated in southeastern North America during the early Miocene and rapidly diversified, followed by movement into South America in the Late Miocene or Early Pliocene. We propose two possible routes for Agalinis movement into South America: either through the Andes or via the South American lowland grasslands (e.g., Chaco, Pampas, Cerrado, Caatinga, Llanos), using grassland corridors for dispersal within the continent. After its arrival in South American highlands, the clade underwent rapid diversification. State reconstructions indicated that the genus had a bee-pollinated ancestor and that hummingbird pollination evolved only once, with many transitions back to bee pollination. In contrast, the perennial life strategy evolved multiple times within the genus, including at least once in the ancestor of all South American species and twice in the North American species.

Main Conclusions: Agalinis likely originated in North America and later migrated to South America, followed by rapid diversification (i.e., ‘dispersification’). Thus, Agalinis is a clade that refutes the tropical conservatism hypothesis and the out-of-the-tropics model. Moreover, the dispersal to the Brazilian highlands was from nearby species pools and not from other highland habitats such as the Andes, followed by several in situ speciation events. These high diversification rates were partly associated with Quaternary climatic oscillations, and perennial and hummingbird-pollinated species exhibited higher turnover rates.
DOI: 10.5281/zenodo.15758305
title: Data from: 'Dispersification' of Agalinis (Orobanchaceae) into South America is associated with hummingbird pollination and perennial life history shifts.

description: Aim: Several mechanisms contribute to the plant biodiversity of the Neotropics, with the highlands of South America serving as important hotspots of diversity. In particular, the Brazilian highlands exhibit high biodiversity due to complex diversification dynamics and a mixture of contributions from different biomes. In this study, we reconstruct the timing and potential triggers of diversification of Agalinis, hemiparasitic plants that inhabit open grassland habitats, to investigate their biogeographic history and migration patterns across the Americas.

Location: North, Central, and South America

Taxon: Agalinis.

Methods: We reconstructed dated phylogenies of Agalinis using a secondary calibration approach, sampling 73% of the known species, including multiple species from the Andes and Brazilian highlands. We inferred ancestral distributions to understand migration patterns between North and South America and within South America. Additionally, we investigated shifts in diversification rates within the genus and reconstructed ancestral pollination syndrome and life history strategy states. All analyses were performed across a distribution of trees to account for phylogenetic uncertainty.

Results: Agalinis likely originated in southeastern North America during the early Miocene and rapidly diversified, followed by movement into South America in the Late Miocene or Early Pliocene. We propose two possible routes for Agalinis movement into South America: either through the Andes or via the South American lowland grasslands (e.g., Chaco, Pampas, Cerrado, Caatinga, Llanos), using grassland corridors for dispersal within the continent. After its arrival in South American highlands, the clade underwent rapid diversification. State reconstructions indicated that the genus had a bee-pollinated ancestor and that hummingbird pollination evolved only once, with many transitions back to bee pollination. In contrast, the perennial life strategy evolved multiple times within the genus, including at least once in the ancestor of all South American species and twice in the North American species.

Main Conclusions: Agalinis likely originated in North America and later migrated to South America, followed by rapid diversification (i.e., ‘dispersification’). Thus, Agalinis is a clade that refutes the tropical conservatism hypothesis and the out-of-the-tropics model. Moreover, the dispersal to the Brazilian highlands was from nearby species pools and not from other highland habitats such as the Andes, followed by several in situ speciation events. These high diversification rates were partly associated with Quaternary climatic oscillations, and perennial and hummingbird-pollinated species exhibited higher turnover rates.
DOI: 10.15468/h2b5v5
title: Two new alkali-sink specialist species of Paruroctonus Werner 1934 (Scorpiones, Vaejovidae) from central California

description: This dataset contains the digitized treatments in Plazi based on the original journal article Jain, Prakrit, Forbes, Harper, Esposito, Lauren A. (2022): Two new alkali-sink specialist species of Paruroctonus Werner 1934 (Scorpiones, Vaejovidae) from central California. ZooKeys 1117: 139-188, DOI: http://dx.doi.org/10.3897/zookeys.1117.76872, URL: http://dx.doi.org/10.3897/zookeys.1117.76872
DOI: 10.6084/m9.figshare.26654785.v1
title: Additional file 16 of Whole genome-scale assessment of gene fitness of Novosphingobium aromaticavorans during spaceflight

description: Supplementary Material 16
DOI: 10.6084/m9.figshare.26654788
title: Additional file 17 of Whole genome-scale assessment of gene fitness of Novosphingobium aromaticavorans during spaceflight

description: Supplementary Material 17
DOI: 10.6084/m9.figshare.26654776
title: Additional file 13 of Whole genome-scale assessment of gene fitness of Novosphingobium aromaticavorans during spaceflight

description: Supplementary Material 13
DOI: 10.6084/m9.figshare.26654788.v1
title: Additional file 17 of Whole genome-scale assessment of gene fitness of Novosphingobium aromaticavorans during spaceflight

description: Supplementary Material 17
DOI: 10.6084/m9.figshare.26654791
title: Additional file 18 of Whole genome-scale assessment of gene fitness of Novosphingobium aromaticavorans during spaceflight

description: Supplementary Material 18
DOI: 10.6084/m9.figshare.26654791.v1
title: Additional file 18 of Whole genome-scale assessment of gene fitness of Novosphingobium aromaticavorans during spaceflight

description: Supplementary Material 18
DOI: 10.15468/dl.vey3f2
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.416044 -32.362496, 149.416044 -32.366987, 149.427273 -32.366987, 149.427273 -32.362496, 149.434011 -32.362496, 149.434011 -32.36025, 149.438502 -32.36025, 149.438502 -32.353512, 149.456469 -32.353512, 149.456469 -32.351267, 149.447485 -32.351267, 149.447485 -32.346775, 149.449731 -32.346775, 149.449731 -32.344529, 149.447485 -32.344529, 149.447485 -32.342283, 149.440748 -32.342283, 149.440748 -32.346775, 149.438502 -32.346775, 149.438502 -32.344529, 149.425027 -32.344529, 149.425027 -32.337792, 149.420536 -32.337792, 149.420536 -32.344529, 149.41829 -32.344529, 149.41829 -32.346775, 149.420536 -32.346775, 149.420536 -32.351267, 149.41829 -32.351267, 149.41829 -32.353512, 149.420536 -32.353512, 149.420536 -32.358004, 149.431765 -32.358004, 149.431765 -32.36025, 149.425027 -32.36025, 149.425027 -32.362496, 149.416044 -32.362496)), ((149.416044 -32.362496, 149.416044 -32.36025, 149.411553 -32.36025, 149.411553 -32.362496, 149.416044 -32.362496)), ((149.427273 -32.366987, 149.427273 -32.369233, 149.434011 -32.369233, 149.434011 -32.366987, 149.427273 -32.366987)), ((149.41829 -32.344529, 149.41829 -32.342283, 149.416044 -32.342283, 149.416044 -32.344529, 149.41829 -32.344529)))"
 ]
}

 The dataset includes 143 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066072-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26654623
title: Wasin-Al-Masoodi--Raw_data.xlsx

description: Raw data
DOI: 10.6084/m9.figshare.26654623.v1
title: Wasin-Al-Masoodi--Raw_data.xlsx

description: Raw data