cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29108933.v1
title: NOAA APT Signals from Mianyang, China Ground Station and Temperature Data for Qinghai Lake (May–August 2024)

description: This dataset contains NOAA APT satellite signals recorded from May to August 2024 using the Mianyang ground station. The raw signals are provided in WAV audio format. Additionally, the dataset includes temperature measurements of Qinghai Lake obtained from the China Weather Network (CWN) for the same period. Temperature comparison results between the satellite measurements and CWN reference data are also included in Excel format. This dataset supports the validation and calibration of satellite-based environmental monitoring systems.
DOI: 10.6084/m9.figshare.6706874.v1
title: Supplementary Material for: Regional Subclinical Cerebrovascular Disease Is Associated with Balance in an Elderly Multi-Ethnic Population

description: <b><i>Introduction:</i></b> White matter hyperintensity volume (WMHV) and subclinical brain infarcts (SBI) are associated with impaired mobility, but less is known about the association of WMHV in specific brain regions. We hypothesized that anterior WMHV would be associated with lower scores on the Short Physical Performance Battery (SPPB), a well-validated mobility scale. <b><i>Methods:</i></b> The SPPB was measured a median of 5 years after enrollment into the Northern Manhattan MRI sub study. Volumetric distributions for WMHV in 14 brain regions as a proportion of total cranial volume were determined. Multi-variable linear regression was performed to examine the association of SBI and regional log-WMHV with the SPPB score. <b><i>Results:</i></b> Among 668 participants with SPPB measurements (mean 74 ± 9 years, 37% male and 70% Hispanic), the mean SPPB score was 8.2 ± 2.9. Total (beta = –0.3 per SD, <i>p</i> = 0.001), anterior periventricular (beta = –0.4 per SD, <i>p</i> = 0.001), parietal (beta = –0.2 per SD, <i>p</i> = 0.02) and frontal (beta = –0.3 per SD, <i>p</i> = 0.002) WMHVs were associated with SPPB; other WMHV and SBI were not associated with the SPPB. <b><i>Conclusions:</i></b> WMHV, especially in the anterior ­cerebral regions, is associated with a lower SPPB. Prevention of subclinical cerebrovascular disease is a potential target to prevent physical decline in the elderly.
DOI: 10.6084/m9.figshare.c.3671842_d3.v1
title: Additional file 3: Table S1. of Hh/Gli antagonist in acute myeloid leukemia with CBFA2T3-GLIS2 fusion gene

description: Genetic features of control AML cell lines. * Data provided by DSMZ and by literature. (XLSX 11Â kb)
DOI: 10.15468/dl.mamfw2
title: Occurrence Download

description: A dataset containing 561 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Physalis hederifolia A.Gray",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 561 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013151-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28596650.v1
title: Supplementary Material for: Preservation of Urinary Podocyte Markers in Diabetic Kidney Disease by SGLT2 Inhibitor Therapy

description: Background Sodium glucose cotransporter 2 inhibitor (SGLT2i) is a standard treatment for kidney and cardiovascular protection in diabetic kidney disease (DKD). We investigated the effect of SGLT2i on the urinary podocyte-associated molecules levels in DKD. Methods We studied 24 DKD patients who were started on SGLT2i treatment and 25 patients who were not treated (control group). Urinary levels of podocyte-associated molecules, their corresponding mRNA levels in urinary sediment, estimated glomerular filtration rate (eGFR), and urine albumin-creatinine ratio (UACR) were measured at baseline and 3 months later. Results Urinary levels of podocin, podocalyxin, and synaptopodin increased significantly over 3 months in the control group, while the levels remained static in the treatment group. After 3 months of treatment, urinary podocin (2.95 [0.92-5.45] vs 9.15 [1.88-24.80] ng/mol-Cr, p &lt;0.01), podocalyxin (367.3 [299.5-768.6] vs 920.6 [369.3-2060.4] ng/mol-Cr, p &lt;0.01), and synaptopodin levels (13.17 [9.86-47.02] vs 35.56 [17.59-134.08] ng/mol-Cr, p &lt;0.05) were significantly lower in the treatment than the control group. Urinary sediment mRNA levels of podocin, podocalyxin, synaptopodin, and nephrin did not change in both groups. However, there was no significant correlation between urinary podocyte-associated marker levels and eGFR or UACR at baseline or after treatment. Conclusions SGLT2i prevent the progressive increase in the urinary excretion of podocyte-specific molecules in DKD patients, suggesting that SGLT2 inhibitors has a protective effect to the podocytes.
DOI: 10.6084/m9.figshare.4334048.v7
title: Ensemble Learning for Multi-type Classification in Heterogeneous Networks

description: Ensemble Learning for Multi-type Classification in Heterogeneous Networks<br>In this project you can find the following files:<br>a) EnsembleMRSBC.zipThis file contains the systems (Mr-SBC, ST-MrSBC and MT-MrSBC), the datasets used for the experimental evaluation (they are dump databases generated with PostgreSQL 9.5) and, for each dataset, the 10 folds used for the 10-fold cross validation. Moreover, an example of configuration file for the execution of the system is included in the zip file.<br>b) README.txtThis file contains the full instructions for the execution of the system.<br>c) Results_EnsembleMT-MrSBC.xlsThis Excel file contains the results in terms of accuracy obtained on all datasets (according to the selected target types and their target attributes) by the systems: Mr-SBC, ST-MrSBC, MT-MrSBC (Lexicographic ordering), MT-MrSBC (Random ordering), RelIBk (RelWEKA), RelSMO (RelWEKA), HENPC and GNetMine. Results are reported for each fold and for each iteration in the case of our ensemble-based systems ST-MrSBC and MT-MrSBC (both Lexicographic and Random versions).<br>For more details, please refer to the manuscript:F. Serafino, G. Pio, M. Ceci, "Ensemble Learning for Multi-type Classification in Heterogeneous Networks"
DOI: 10.17632/c25nh9nfxp
title: Data for: Development of a new code for stopping power and CSDA range calculation of incident charged particles, Part A: electron and positron

description: these data present the stopping power and range of electron and positron in selected matters
DOI: 10.17632/z9f499kv9d
title: Dataset of "Effect of aerobic fitness on the validity of the Calera Research™ sensor to estimate core temperature during exercise"

description: Dataset of the paper "Effect of aerobic fitness on the validity of the Calera Research™ sensor to estimate core temperature during exercise" published in the Journal of Thermal Biology: https://doi.org/10.1016/j.jtherbio.2025.104067
DOI: 10.6084/m9.figshare.19175882.v1
title: Base de datos.pdf

description: Data from the study Changing trends in ophthalmological emergencies during the COVID-19 pandemic
DOI: 10.6084/m9.figshare.841755.v6
title: Spatial Networks for Archaeology

description: Slides for an invited talk given at the workshop on "Networks over space and time: modelling, analyzing, and representing complex data in the digital humanities", on 8th November 2013 at FCSH, Universidade Nova de Lisboa, Lisbon, Portugal. (WG1, Spatial and temporal modelling: representation of space and time, NeDiMAH).
DOI: 10.17632/c3dp75g5x9
title: Fatigue Data for Laser Powder Bed Fused 17-4 PH Stainless Steel Specimens in Different Heat Treatment and Surface Roughness Conditions

description: This article presents the data demonstrating the synergistic effect of surface roughness and heat treatment on the fatigue behavior of 17–4 PH stainless steel (SS) fabricated via Laser Powder Bed fusion (L-PBF). Two sets of specimens, in as-built and machined surface conditions, were heat treated using five different recommended procedures for 17-4 PH SS by ASTM. Axial fully-reversed fatigue tests (R = -1) were conducted on heat treated as-built and machined specimens. The stable hysteresis stress–strain data, as well as the maximum and minimum stress and strain values for the cycle in a log10 increment are included for all conducted fatigue experiments. In addition, fractography images are provided for selected set of specimens.
DOI: 10.25573/data.10042697.v10
title: Fortuna, Clearing_Air Temperature, Manual

description: Fortuna station (Centro de Investigaciones Jorge L. Arauz)<br>North & South Clearing<br>Location: 8° 43.340'N, 82° 14.241'W<br>Air Temperature, Manual, Daily max/min<br><br>Located in the highlands of the Chiriqui Province, in western Panama.There are three sensor locations: north clearing, south clearing, and a 15m tower.<br>
DOI: 10.6084/m9.figshare.26827993.v1
title: CldNetV2 - 202203

description: Retrieval of all-day cloud property based on satellite remote sensing dataGithub page: https://github.com/metdai/PMD-CldNetV2
DOI: 10.6084/m9.figshare.28212458.v2
title: Data and code for "Population genetic structure of Azara’s owl monkey (<i>Aotus azarae</i>) from northern Argentina: insights into gene flow and dispersal patterns in a pair-living primate"

description: We used 22 microsatellite loci and mitochondrial DNA (mtDNA) sequences to assess genetic diversity and population structure in Azara's owl monkey (<i>Aotus azarae), </i>an<i> </i>arboreal, pair-living platyrrhine primate, in the Gran Chaco of northern Argentina in an area characterized by a contiguous gallery forest and patches of forest in naturally occurring savanna. We also analyzed sex-specific patterns of isolation-by-distance and used assignment tests to evaluate dispersal patterns, assess potential sex differences in gene flow, and assessed potential differences in gene flow within and between gallery forest and forest patch habitats.The data files and R code used to carry out these analyses had been uploaded here.
DOI: 10.6084/m9.figshare.28877837.v2
title: <b>The Grand Unified Theory of Informational Gravity: From Nothingness to the Cosmos</b>

description: This work presents a comprehensive, mathematically detailed theory unifying the smallest conceivable unit of nothingness with the largest structure\u2014the universe\u2014through the Nihelion, a fundamental entity that operates within both nothingness and the universe, unconstrained by laws or rules. The theory integrates the MLS Sphere geometric-informational framework and the Julius Crawford Paradox, providing a seamless bridge from absolute void to cosmic totality. The Nihelion is shown to be the eternal connector, ensuring perpetual unity
DOI: 10.17632/zc4vc9kw2n
title: Data for: Manufacturing of demineralized whey concentrates with extended shelf life: Impact of the degree of demineralization on functional and microbial quality criteria

description: Composition of nanofiltration (NF) concentrates with 12%, 18% and 24% dry matter (DM) without diafiltration and with 0.75 and 1.5 diafiltration steps (DS)
DOI: 10.6084/m9.figshare.10260722.v3
title: Data from: Key factors explaining critical swimming speed in freshwater fish: a review and statistical analysis for Iberian species

description: Ucrit data for 35 Iberian freshwater species (18 native and 17 alien), from more than 90 literature sources published from 1959 to 2019.
DOI: 10.6084/m9.figshare.24803115.v1
title: fig6

description: <b>Figure 6. Conflict events against the state in countries with high rates of electricity poverty (2016-2020)</b>. Of the 97 countries with electrification rates below 100%, 46 have experienced conflict events against the state between 2016-2020. The heat scale shows the number of conflict events in each country, while the green dots display the actual location of each battle. Risk zones based on a clustered convex hull analysis of the battle events are shown with a hashed pattern. In grey, countries that were removed from this analysis (complete electrification rate).
DOI: 10.17632/337m3ppw46
title: Neonate and Adult Human Platelet RNA-seq and Ribo-seq Data

description: To compare the neonatal platelet transcriptome and translatome changes during development, RNA-seq and Ribo-seq were performed in platelet obtained from adult and cord blood (CB). For RNA-seq, there are 11 CB samples and 9 adult samples. For Ribo-seq, 3 CB samples and 3 adult samples are studied. The sequencing details are shown below. Raw expression data, preprocessed (normalized, filtered) data, and Differential Expression Gene lists are included.
The study were completed using trizol-isolated RNA, and microarray analysis using the ~20,000 annotated gene set human ClariomTM S Array (Applied Biosystems);2,8 RNASeq and RiboSeq transcriptomic studies were completed using the NovoSeq 6000 platform.  RNASeq (100 ng/sample) was completed using previously-established protocols for mRNA capture, cDNA synthesis, library generation, and DNA Sequencing.9  Ribosome footprint profiling (RiboSEq) was completed as previously described,10,11 starting with 5 X 108 platelets incubated with 100 g mL-1 cycloheximide for 1 minute at 250C to preserve ribosome-attached mRNAs.  Following lysis, prepared lysates were used for RNase I digestion of polysomes, size selection and purification of monosme-bound RNA, followed by cDNA synthesis, PCR amplification, and single-read pooled sequencing (>90 million reads/library).  For both RNASeq and RiboSeq, FASTQ sequences truncated as 50 mer pair-end reads were mapped to the human genome Hg38 GRCh38 build,12 and normalized mRNA abundance for each transcript was calculated using the RPKM (reads per kilobase/106) score.  For all samples, fragment alignment ranged between 94% – 96%.
DOI: 10.17632/czh96my8cf
title: Enhancing microglial phagocytosis analysis through deep learning: A U-Net based approach

description: This dataset provides a trained U-Net (called AIstain), an DEMO analysis assay and the training dataset used in our corresponding Manuscript: "Enhancing microglial phagocytosis analysis through deep learning: A U-Net based approach" (Zähringer et al.) submitted to Cell Reports Methods.
The neural network can be used on Olympus ScanR systems with the analysis software v3.4 and higher to perform label-free live cell imaging experiments.
Further information and how to use the U-Net can be found in the publication.
DOI: 10.17632/kg93hdwwzy
title: RNA-sequencing and proteomics data of "Targeting palmitoylation of SLC11A2 for treatment of iron overload and osteoporosis"

description: This dataset includes the raw RNA-sequencing and proteomics data of osteoclast differentiation generated in the study. Eight-week-old mice were euthanized, and hindlimb bones were harvested and flushed with PBS. Bone marrow was filtered through a 0.4 μm mesh, centrifuged, and resuspended in α-MEM containing 10 ng/mL MCSF and 10% FBS, then plated in 10 cm dishes. After 2-4 days, cells were passaged and cultured in media supplemented with 30 ng/mL MCSF and 50 ng/mL RANKL, with medium changes every two days. Cells were collected after three days for subsequent RNA-sequencing and proteomics.
DOI: 10.6084/m9.figshare.22218808.v1
title: Supporting documents from Sex-biased infections scale to population impacts for an emerging wildlife disease

description: Contains supplemental appendix, tables, figures, and additional methods description
DOI: 10.17632/87gj4vgtj2
title: Data for: Concrete Gas Permeability from Different Methods: Correlation Analysis
DOI: 10.6084/m9.figshare.12101067.v1
title: sample.csv.gz

description: test
DOI: 10.6084/m9.figshare.28806092.v1
title: DIPPY Apr 2025

description: Dataset for the DIPPY project
DOI: 10.6084/m9.figshare.3145759.v2
title: IBH in Exmoor Ponies

description: IBH phenotypes and high density array data for a sample of exmoor ponies
DOI: 10.6084/m9.figshare.3513035.v1
title: Appendix C. A detailed description of the habitat/vegetation variables measured during the study.

description: A detailed description of the habitat/vegetation variables measured during the study.
DOI: 10.17632/533d5ttydp
title: Supplemental material: Evaluation of a fully automated 2D imaging system for real-time cattle lameness detection using machine learning

description: Supplemental material: Evaluation of a fully automated 2D imaging system for real-time cattle lameness detection using machine learning
DOI: 10.6084/m9.figshare.24715773.v1
title: VOC_data_Ahmedadbad_winter_summer

description: Primary VOC data (mixing ratios in ppb) measured at an urban site of Ahmedabad using PTR-ToF-MS instrument during winter and summer seasons. Secondary data (calculation using primary data are also included).
DOI: 10.17632/2trdgv8wrp
title: ComplementaryData_TheValueofForecastsinQHMarkets

description: Complementary data package for reproduction of results reported in "The value of forecasts - Quantifying the economic gains of accurate quarter-hourly forecasts" by Christopher Kath & Florian Ziel.
DOI: 10.17632/kdcspz6xtn
title: Claims Management Log Dataset with Digital Documents

description: This is an event log dataset from a real-world claims management process of a mid-sized German insurance company. It is used in the article "Utilizing the Omnipresent: Incorporating Digital Documents into Predictive Process Monitoring Using Deep Neural Networks".
This event log is special in that it associates individual events with external context information in the form of digital documents with multiple pages. These digital documents were either received or produced during each event. The event log ("process_log.csv") is provided as a CSV file and contains the following attributes:

* timestamp: timestamp of the event
* instance_id: unique identifier of the process instance
* state: event type as integer
* state_name: event type
* type: damage type (instance outcome) as integer
* type_name: damage type (instance outcome)
* file_name: file name of the associated digital document
* n_pages: number of pages in the associated document
* time_since_last_event: elapsed seconds since the last event occurred
* log_time_since_last_event: natural logarithm of elapsed seconds since the last event occurred

The original digital documents are stored in the PDF format and contain up to ten pages. For reasons of data privacy, they can't be published directly. However, to enable research to utilize this data, the digital documents are published as feature vectors extracted by established pretrained neural networks (feature extractors). While these feature vectors cannot be used to reconstruct the source document, they contain meaningful information that can be used in applications such as Predictive Process Monitoring (PPM).

Feature vectors are extracted using four models:
* VGG-16 pretrained on the ImageNet dataset
* VGG-16 pretrained on the RVL-CDIP dataset
* BERT pretrained on German texts
* LayoutXLM pretrained on multilingual document data

They are stored as zipped numpy arrays (e.g., "features/vgg_rvl.zip"). The file name serves as the unique key to link the digital documents to their corresponding events in the log. Details and references are provided in the associated article.

Finally, we also publish the exact data splits ("folds_and_splits.csv") that were used for model evaluation in the associated article.
DOI: 10.17632/mg4gc63h8x
title: A Macsyma program for computing analytic Clebsch–Gordan coefficients of U(3)⊃SO(3)

description: Abstract Part 1 of the program generates the reduced matrix elements of the spherical tensor operator Q from which the matrix elements of all U(3) generators can be obtained. Part 2 computes the isoscalar factors for the coupling of two U(3) irreps. The basis used is symmetry adapted to SO(3)⊃SO(2) , as is desired for describing collective nuclear motion. The output of the matrix elements as well as the isosc... Title of program: exactU3clebsch Catalogue Id: ADOL_v1_0 Nature of problem Elliott's nuclear SU(3) model [1,2] describes collective nuclear motion by considering the leading SU(3) irrep within the totally antisymmetric tensor product space of the valence nucleons. A rotational spectrum is expected, hence the basis for the irrep space should be symmetry adapted to the rotation group SO(3). The reduced matrix elements of the spherical tensor operator Q are needed to compute the electromagnetic transition rates. When coupling two SU(3) contained in SO(3) irreps to good SU ... Versions of this program held in the CPC repository in Mendeley Data ADOL_v1_0; exactU3clebsch; 10.1016/S0010-4655(01)00205-3 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.6084/m9.figshare.10247531.v1
title: CytoData-2019 original challenge raw data

description: All data was originally published in: Breinig et al. Molcular System Biology, 2015<br>The data was re-analyzed from raw images and split into training and validation data.<br>EBImage was used to segement cells and extract features.<br>Segemented cells were cropped. <br><br>Validation cells were anonymyzed.<br>The task was to learn the annotated Mode of action (MOA) or target of the chemcial that each validation cells was treated with after learning from the training cells. MOA is coded by folder name in the image and the "target" column in the csv files.<br>Cells in the same well were targeted by the same chemcial and thus share their MOA. This information can be used to solve the challenge, however the more interesting/challenging part is the classification of MOA from looking at a single cell only.<br><br>Files and rows in feature space data are mapped 1:1 by their barcodes.<br>
DOI: 10.6084/m9.figshare.14530008.v1
title: Supplementary Table_ PART 2_ Identified Variants_FINAL.pdf

description: Genetic variants
DOI: 10.6084/m9.figshare.19733905.v2
title: GSE141460

description: 20 fresh surgical tumor specimens from 18 EPN patients and two patient-derived xenograft (PDX) models.
DOI: 10.6084/m9.figshare.23179910.v1
title: SCIERC NER

description: This dataset is based on the SCIERC dataset and cotnains abstracts of scientific papers, alongside their scientific NER IOB annotations for different entities in the text. <br> Citation for SCIERC: Luan, Yi, He, Luheng, Ostendorf, Mari, and Hajishirzi, Hannaneh. (2018). "Multi-Task Identification of Entities, Relations, and Coreference for Scientific Knowledge Graph Construction." In <em>Proceedings of the Conference on Empirical Methods in Natural Language Processing (EMNLP)</em>. <br> This dataset was extracted from the S2ORC dataset. Citation: Lo, Kyle, Wang, Lucy Lu, Neumann, Mark, Kinney, Rodney, and Weld, Daniel. (2020). "S2ORC: The Semantic Scholar Open Research Corpus." In <em>Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics</em>. Online. Association for Computational Linguistics. <strong>https://www.aclweb.org/anthology/2020.acl-main.447</strong>. doi: 10.18653/v1/2020.acl-main.447. pp. 4969-4983. <br> S2ORC is licenced under ODC-By 1.0 by the AllanAI institute. The dataset is acompanied by properties and embeddings calculated using the deepchecks package, and predictions.
DOI: 10.6084/m9.figshare.24113328.v1
title: The assembly and annotation of Gros Michel

description: Gros_Michel_Ban_genomic.fna.gz, Gros_Michel_Dh_genomic.fna.gz and Gros_Michel_Ze_genomic.fna.gz are three haplotype-resolved assemblies for sub-genomes of Gros Michel.