cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15137701
title: TABLE 6 in The remarkable record of mustelids from Hunas (Bavaria, Germany)

description: TABLE 6. — Main indexes of the mandible and lower dentition,distinguishing different small,European Mustela Linnaeus,1758 species. Abbreviations: eMP, early Middle Pleistocene; EP, Early Pleistocene.
HunasMustela erminea Linnaeus, 1758Mustela nivalis Linnaeus, 1766Mustela palerminea Baumann 2011Mustela praenivalis Kormos, 1934ratioSexMmin-max (n)Mmin-max (n)Mmin-max (n)AgeMmin-max (n)Mmin-max (n)p2 L/m1 L♂♂28.322.9-31.9 (26)23.120.4-26.7 (151)25.522.1-30.8 (304)EP31.128.1-33.8 (32)30.928.7-34.7 (27)♀♀29.426.9-32.0 (5)24.120.5-27.0 (178)26.122.2-30.9 (187)eMP28.924.3-32.4 (12)31.426.5-37.4 (11)B/L p3♂♂56.043.2-69.2 (46)61.554.2-68.7 (197)57.347.0-68.2 (290)EP54.645.8-62.1 (91)52.546.2-64.1 (22)♀♀56.046.8-66.4 (18)60.250.7-69.1 (230)57.842.1-73.4 (260)eMP57.752.4-63.2 (18)53.649.7-60.1 (7)Ba/Bp p4♂♂88.883.8-93.7 (69)74.662.2-74.4 (248)89.083.1-93.9 (206)EP89.382.2-95.9 (194)94.789.6-96.9 (35)♀♀90.387.2-94.1 (29)81.468.3-85.8 (162)88.982.2-93.5 (221)eMP88.182.3-92.5 (33)91.986.5-96.7 (11)L m1♂♂4.434.02-4.97 (103)5.845.51-6.35 (151)4.584.02-5.27 (304)EP5.464.49-6.12 (165)4.233.27-5.09 (57)♀♀3.552.87-3.98 (39)5.194.65-5.57 (177)3.593.09-4.14 (187)eMP5.234.46-5.97 (36)3.813.12-4.76 (24)L ta/ L tr m1♂♂40.630.5-51.2 (103)23.918.6-32.4 (151)39.628.7-44.7 (304)EP45.435.8-51.7 (165)54.850.8-59.9 (57)♀♀49.139.2-54.4 (39)27.820.8-33.9 (177)44.438.3-51.5 (187)eMP43.137.6-49.7 (36)53.850.5-56.9 (24)B ta/B tr m1♂♂90.687.1-95.8 (103)78.166.5-87.1 (151)90.286.8-99.3 (304)EP91.989.3-94.3 (165)94.788.5-96.9 (57)♀♀91.787.2-96.2 (39)82.977.7-86.1 (177)91.381.5-98.3 (187)eMP90.187.8-92.7 (36)94.090.5-96.3 (24)
description: Published as part of Marciszak, Adrian, Hilpert, Brigitte & Ambros, Dieta, 2024, The remarkable record of mustelids from Hunas (Bavaria, Germany), pp. 356 in Comptes Rendus Palevol 23 (23) on page 356, DOI: 10.5852/cr-palevol2024v23a23, http://zenodo.org/record/13683058
DOI: 10.5281/zenodo.15137702
title: TABLE 6 in The remarkable record of mustelids from Hunas (Bavaria, Germany)

description: TABLE 6. — Main indexes of the mandible and lower dentition,distinguishing different small,European Mustela Linnaeus,1758 species. Abbreviations: eMP, early Middle Pleistocene; EP, Early Pleistocene.
HunasMustela erminea Linnaeus, 1758Mustela nivalis Linnaeus, 1766Mustela palerminea Baumann 2011Mustela praenivalis Kormos, 1934ratioSexMmin-max (n)Mmin-max (n)Mmin-max (n)AgeMmin-max (n)Mmin-max (n)p2 L/m1 L♂♂28.322.9-31.9 (26)23.120.4-26.7 (151)25.522.1-30.8 (304)EP31.128.1-33.8 (32)30.928.7-34.7 (27)♀♀29.426.9-32.0 (5)24.120.5-27.0 (178)26.122.2-30.9 (187)eMP28.924.3-32.4 (12)31.426.5-37.4 (11)B/L p3♂♂56.043.2-69.2 (46)61.554.2-68.7 (197)57.347.0-68.2 (290)EP54.645.8-62.1 (91)52.546.2-64.1 (22)♀♀56.046.8-66.4 (18)60.250.7-69.1 (230)57.842.1-73.4 (260)eMP57.752.4-63.2 (18)53.649.7-60.1 (7)Ba/Bp p4♂♂88.883.8-93.7 (69)74.662.2-74.4 (248)89.083.1-93.9 (206)EP89.382.2-95.9 (194)94.789.6-96.9 (35)♀♀90.387.2-94.1 (29)81.468.3-85.8 (162)88.982.2-93.5 (221)eMP88.182.3-92.5 (33)91.986.5-96.7 (11)L m1♂♂4.434.02-4.97 (103)5.845.51-6.35 (151)4.584.02-5.27 (304)EP5.464.49-6.12 (165)4.233.27-5.09 (57)♀♀3.552.87-3.98 (39)5.194.65-5.57 (177)3.593.09-4.14 (187)eMP5.234.46-5.97 (36)3.813.12-4.76 (24)L ta/ L tr m1♂♂40.630.5-51.2 (103)23.918.6-32.4 (151)39.628.7-44.7 (304)EP45.435.8-51.7 (165)54.850.8-59.9 (57)♀♀49.139.2-54.4 (39)27.820.8-33.9 (177)44.438.3-51.5 (187)eMP43.137.6-49.7 (36)53.850.5-56.9 (24)B ta/B tr m1♂♂90.687.1-95.8 (103)78.166.5-87.1 (151)90.286.8-99.3 (304)EP91.989.3-94.3 (165)94.788.5-96.9 (57)♀♀91.787.2-96.2 (39)82.977.7-86.1 (177)91.381.5-98.3 (187)eMP90.187.8-92.7 (36)94.090.5-96.3 (24)
description: Published as part of Marciszak, Adrian, Hilpert, Brigitte & Ambros, Dieta, 2024, The remarkable record of mustelids from Hunas (Bavaria, Germany), pp. 356 in Comptes Rendus Palevol 23 (23) on page 356, DOI: 10.5852/cr-palevol2024v23a23, http://zenodo.org/record/13683058
DOI: 10.5281/zenodo.15137703
title: TABLE 7 in The remarkable record of mustelids from Hunas (Bavaria, Germany)

description: TABLE 7. — Number and percentage of particular morphotypes in small, European Mustela Linnaeus, 1758 species.
HunasMustela erminea Linnaeus, 1758Mustela nivalis Linnaeus, 1766Mustela palerminea Baumann 2011Mustela praenivalis Kormos, 1934ToothMorph.♂♂♀♀♂♂♀♀♂♂♀♀p3A1–3 (16.7%)–10 (4.4%)12 (4.1%)31 (11.9%)84 (81.6%)6 (20.0%)A2–9 (50.0%)4 (2.0%)37 (16.1%)28 (9.7%)157 (60.4%)11 (10.7%)22 (73.3%)B20 (43.5%)4 (22.2%)15 (7.6%)171 (74.3%)38 (13.1%)35 (13.5%)8 (7.8%)2 (6.7%)C17 (37.0%)2 (11.1%)176 (89.3%)12 (5.2%)51 (17.6%)24 (9.2%)––D9 (19.5%)–2 (1.1%)–161 (55.5%)13 (5.0%)––p4A10 (14.5%)6 (20.7%)––12 (5.8%)14 (6.3%)145 (61.2%)11 (21.2%)B56 (81.2%)22 (75.9%)14 (5.7%)29 (17.9%)36 (17.5%)193 (87.4%)92 (38.8%)41 (78.8%)C2 (2.9%)1 (3.5%)234 (94.3%)133 (82.1%)158 (76.7%)14 (6.3%)––m1A–10 (25.6%)–––19 (10.2%)166 (79.4%)82 (82.8%)B2 (2.0%)19 (48.7%)–––117 (62.6%)43 (20.6%)17 (17.2%)C25 (24.3%)7 (18.0%)8 (5.3%)15 (8.5%)36 (11.8%)33 (17.7%)––D76 (73.8%)3 (7.7%)143 (94.7%)162 (91.5%)268 (88.2%)18 (9.6%)––
description: Published as part of Marciszak, Adrian, Hilpert, Brigitte & Ambros, Dieta, 2024, The remarkable record of mustelids from Hunas (Bavaria, Germany), pp. 356 in Comptes Rendus Palevol 23 (23) on page 356, DOI: 10.5852/cr-palevol2024v23a23, http://zenodo.org/record/13683058
DOI: 10.5281/zenodo.15137704
title: TABLE 7 in The remarkable record of mustelids from Hunas (Bavaria, Germany)

description: TABLE 7. — Number and percentage of particular morphotypes in small, European Mustela Linnaeus, 1758 species.
HunasMustela erminea Linnaeus, 1758Mustela nivalis Linnaeus, 1766Mustela palerminea Baumann 2011Mustela praenivalis Kormos, 1934ToothMorph.♂♂♀♀♂♂♀♀♂♂♀♀p3A1–3 (16.7%)–10 (4.4%)12 (4.1%)31 (11.9%)84 (81.6%)6 (20.0%)A2–9 (50.0%)4 (2.0%)37 (16.1%)28 (9.7%)157 (60.4%)11 (10.7%)22 (73.3%)B20 (43.5%)4 (22.2%)15 (7.6%)171 (74.3%)38 (13.1%)35 (13.5%)8 (7.8%)2 (6.7%)C17 (37.0%)2 (11.1%)176 (89.3%)12 (5.2%)51 (17.6%)24 (9.2%)––D9 (19.5%)–2 (1.1%)–161 (55.5%)13 (5.0%)––p4A10 (14.5%)6 (20.7%)––12 (5.8%)14 (6.3%)145 (61.2%)11 (21.2%)B56 (81.2%)22 (75.9%)14 (5.7%)29 (17.9%)36 (17.5%)193 (87.4%)92 (38.8%)41 (78.8%)C2 (2.9%)1 (3.5%)234 (94.3%)133 (82.1%)158 (76.7%)14 (6.3%)––m1A–10 (25.6%)–––19 (10.2%)166 (79.4%)82 (82.8%)B2 (2.0%)19 (48.7%)–––117 (62.6%)43 (20.6%)17 (17.2%)C25 (24.3%)7 (18.0%)8 (5.3%)15 (8.5%)36 (11.8%)33 (17.7%)––D76 (73.8%)3 (7.7%)143 (94.7%)162 (91.5%)268 (88.2%)18 (9.6%)––
description: Published as part of Marciszak, Adrian, Hilpert, Brigitte & Ambros, Dieta, 2024, The remarkable record of mustelids from Hunas (Bavaria, Germany), pp. 356 in Comptes Rendus Palevol 23 (23) on page 356, DOI: 10.5852/cr-palevol2024v23a23, http://zenodo.org/record/13683058
DOI: 10.5281/zenodo.15137706
title: APPENDIX 1 in The remarkable record of mustelids from Hunas (Bavaria, Germany)

description: APPENDIX 1. — Description of sediments in profile 13 of Hunas, the area, where more than 95% mustelid remains were found.
LayerDescriptionroofreddish-brown loams with dolomite debris in different size, most of the stones are parts of the former roof of the caveEdark-grey dolomite sands with dolomite debris of 2-4 cm diameter, in many parts of the layer big amounts of particles from charcoalFyellow-grey dolomite sands with dolomite debris of about 4 cm diameter and particles from charcoalG1dolomite debris about 3-20 cm, in the lower part bigger blocks, little amount of light-grey dolomite sandsG2light to dark reddish-brown, partly loamy and humous dolomite sands with dolomite debris about 2-10 cm diameter, big amounts of particles from charcoalG3light to darker brownish-grey dolomite sands with particles from charcoal and dolomite debrisHbrownish-grey to dark grey humous and dolomite sands with dolomite debris of 2-5 cm diameter, in the upper part particles of charcoal, partly big amountsIlight yellow to light brown-beige loamy dolomite sands, little dolomite debris and only few particles of charcoalK upperreddish-yellow to reddish-brown dolomite sands with dolomite debrisK lowerdark grey dolomite sands with dolomite debris, partly big blocks, and often bigger amounts of particles of charcoalLlight brownish-grey dolomite sands with dolomite debris of 2-5 cm diameter, and partly big blocks, also partly with particles of charcoalMbig blocks and partly yellow-grey dolomite sands with dolomite debris
description: Published as part of Marciszak, Adrian, Hilpert, Brigitte & Ambros, Dieta, 2024, The remarkable record of mustelids from Hunas (Bavaria, Germany), pp. 368 in Comptes Rendus Palevol 23 (23) on page 368, DOI: 10.5852/cr-palevol2024v23a23, http://zenodo.org/record/13683058
DOI: 10.5281/zenodo.15137705
title: APPENDIX 1 in The remarkable record of mustelids from Hunas (Bavaria, Germany)

description: APPENDIX 1. — Description of sediments in profile 13 of Hunas, the area, where more than 95% mustelid remains were found.
LayerDescriptionroofreddish-brown loams with dolomite debris in different size, most of the stones are parts of the former roof of the caveEdark-grey dolomite sands with dolomite debris of 2-4 cm diameter, in many parts of the layer big amounts of particles from charcoalFyellow-grey dolomite sands with dolomite debris of about 4 cm diameter and particles from charcoalG1dolomite debris about 3-20 cm, in the lower part bigger blocks, little amount of light-grey dolomite sandsG2light to dark reddish-brown, partly loamy and humous dolomite sands with dolomite debris about 2-10 cm diameter, big amounts of particles from charcoalG3light to darker brownish-grey dolomite sands with particles from charcoal and dolomite debrisHbrownish-grey to dark grey humous and dolomite sands with dolomite debris of 2-5 cm diameter, in the upper part particles of charcoal, partly big amountsIlight yellow to light brown-beige loamy dolomite sands, little dolomite debris and only few particles of charcoalK upperreddish-yellow to reddish-brown dolomite sands with dolomite debrisK lowerdark grey dolomite sands with dolomite debris, partly big blocks, and often bigger amounts of particles of charcoalLlight brownish-grey dolomite sands with dolomite debris of 2-5 cm diameter, and partly big blocks, also partly with particles of charcoalMbig blocks and partly yellow-grey dolomite sands with dolomite debris
description: Published as part of Marciszak, Adrian, Hilpert, Brigitte & Ambros, Dieta, 2024, The remarkable record of mustelids from Hunas (Bavaria, Germany), pp. 368 in Comptes Rendus Palevol 23 (23) on page 368, DOI: 10.5852/cr-palevol2024v23a23, http://zenodo.org/record/13683058
DOI: 10.5281/zenodo.15158910
title: Table 1 in Detection and characterization of diverse coccidian protozoa shed by California sea lions

description: Table 1 Clinical status, serological results and coccidian sequence types shed by hospitalized California sea lions sampled between September 2010 and May 2012.
TMMC IDAdmit dateSexAge classStranding countyPreliminary diagnosisSerologyCoccidian sequenceT. gondiiS. neuronaN. caninumtypeCSL98309-Sep-2010MJuvenileSanta Cruzpneumonia, trauma (flipper),1:1280<1:40<1:40Amalnutrition, leptospirosisCSL983110-Sep-2010MJuvenileSonomatrauma (eye and face),<1:40<1:40<1:40Amalnutrition, seizures,pneumoniaCSL987816-Oct-2010MYearlingMontereymalnutrition, trauma<1:401:2560<1:40BCSL NCMMC104727-Jan-2011MYearlingHumboldtblind1:40<1:40<1:40ACSL993025-Mar-2011MPupMendocinooil/tar, malnutrition<1:40<1:40<1:40BCSL993914-May-2011MPupSan Franciscomalnutrition, pneumonia<1:40<1:40<1:40Inadequate DNACSL99593-Jun-2011FYearlingSan Luis Obispomalnutrition, abscess<1:40<1:40<1:40BCSL997015-Jun-2011FYearlingSan Luis Obispomalnutrition, abscess<1:40<1:40<1:40Inadequate DNACSL1008930-Aug-2011FYearlingSan Luis Obispomalnutrition, trauma (face)1:320<1:40<1:40ACSL1009231-Aug-2011FYearlingSan Mateoabscess, malnutrition1:80<1:40<1:40A + BCSL101003-Sep-2011MYearlingMontereymalnutrition1:160<1:40<1:40A + BCSL101849-Oct-2011FSubadultMarinpneumonia, leptospirosis<1:40<1:40<1:40BCSL102541-Nov-3011FAdultSan Luis Obisposeizures, domoic acid<1:40<1:40N/ABtoxicity (acute)CSL1024314-Nov-2011MYearlingMontereyentanglement<1:40<1:40<1:40ACSL102667-Jan-2012MJuvenileSan Luis Obispotrauma, malnutrition<1:40<1:40<1:40ACSL1026810-Jan-2012FSubadultMontereytrauma, osteomyelitis<1:40<1:40<1:40B
description: Published as part of Girard, Yvette A., Johnson, Christine K., Fritz, Heather M., Shapiro, Karen, Packham, Andrea E., Melli, Ann C., Carlson-Bremer, Daphne, Gulland, Frances M., Rejmanek, Daniel & Conrad, Patricia A., 2016, Detection and characterization of diverse coccidian protozoa shed by California sea lions, pp. 9 in International Journal for Parasitology: Parasites and Wildlife 5 (1) on page 9, DOI: 10.1016/j.ijppaw.2015.11.003, http://zenodo.org/record/10668346
DOI: 10.5281/zenodo.15158911
title: Table 1 in Detection and characterization of diverse coccidian protozoa shed by California sea lions

description: Table 1 Clinical status, serological results and coccidian sequence types shed by hospitalized California sea lions sampled between September 2010 and May 2012.
TMMC IDAdmit dateSexAge classStranding countyPreliminary diagnosisSerologyCoccidian sequenceT. gondiiS. neuronaN. caninumtypeCSL98309-Sep-2010MJuvenileSanta Cruzpneumonia, trauma (flipper),1:1280<1:40<1:40Amalnutrition, leptospirosisCSL983110-Sep-2010MJuvenileSonomatrauma (eye and face),<1:40<1:40<1:40Amalnutrition, seizures,pneumoniaCSL987816-Oct-2010MYearlingMontereymalnutrition, trauma<1:401:2560<1:40BCSL NCMMC104727-Jan-2011MYearlingHumboldtblind1:40<1:40<1:40ACSL993025-Mar-2011MPupMendocinooil/tar, malnutrition<1:40<1:40<1:40BCSL993914-May-2011MPupSan Franciscomalnutrition, pneumonia<1:40<1:40<1:40Inadequate DNACSL99593-Jun-2011FYearlingSan Luis Obispomalnutrition, abscess<1:40<1:40<1:40BCSL997015-Jun-2011FYearlingSan Luis Obispomalnutrition, abscess<1:40<1:40<1:40Inadequate DNACSL1008930-Aug-2011FYearlingSan Luis Obispomalnutrition, trauma (face)1:320<1:40<1:40ACSL1009231-Aug-2011FYearlingSan Mateoabscess, malnutrition1:80<1:40<1:40A + BCSL101003-Sep-2011MYearlingMontereymalnutrition1:160<1:40<1:40A + BCSL101849-Oct-2011FSubadultMarinpneumonia, leptospirosis<1:40<1:40<1:40BCSL102541-Nov-3011FAdultSan Luis Obisposeizures, domoic acid<1:40<1:40N/ABtoxicity (acute)CSL1024314-Nov-2011MYearlingMontereyentanglement<1:40<1:40<1:40ACSL102667-Jan-2012MJuvenileSan Luis Obispotrauma, malnutrition<1:40<1:40<1:40ACSL1026810-Jan-2012FSubadultMontereytrauma, osteomyelitis<1:40<1:40<1:40B
description: Published as part of Girard, Yvette A., Johnson, Christine K., Fritz, Heather M., Shapiro, Karen, Packham, Andrea E., Melli, Ann C., Carlson-Bremer, Daphne, Gulland, Frances M., Rejmanek, Daniel & Conrad, Patricia A., 2016, Detection and characterization of diverse coccidian protozoa shed by California sea lions, pp. 9 in International Journal for Parasitology: Parasites and Wildlife 5 (1) on page 9, DOI: 10.1016/j.ijppaw.2015.11.003, http://zenodo.org/record/10668346
DOI: 10.5281/zenodo.15158912
title: Table 2 in Detection and characterization of diverse coccidian protozoa shed by California sea lions

description: Table 2 Summary of Coccidia A and B shedding by stranded California sea lions (CSL), 2007 to 2012.
YearNo. CSL sampledNo. CSL shedding oocystsPrevalenceNo. CSL shedding Coccidia ANo. CSL shedding Coccidia B2007a2428.3%212008a156138.3%932009a22700.0%00201016318.8%212011981111.2%5620123725.4%11Total558315.6%1912
a Samples obtained from 2007 to 2009 were reported previously (Carlson-Bremer et al., 2012b).
description: Published as part of Girard, Yvette A., Johnson, Christine K., Fritz, Heather M., Shapiro, Karen, Packham, Andrea E., Melli, Ann C., Carlson-Bremer, Daphne, Gulland, Frances M., Rejmanek, Daniel & Conrad, Patricia A., 2016, Detection and characterization of diverse coccidian protozoa shed by California sea lions, pp. 10 in International Journal for Parasitology: Parasites and Wildlife 5 (1) on page 10, DOI: 10.1016/j.ijppaw.2015.11.003, http://zenodo.org/record/10668346
DOI: 10.5281/zenodo.15158913
title: Table 2 in Detection and characterization of diverse coccidian protozoa shed by California sea lions

description: Table 2 Summary of Coccidia A and B shedding by stranded California sea lions (CSL), 2007 to 2012.
YearNo. CSL sampledNo. CSL shedding oocystsPrevalenceNo. CSL shedding Coccidia ANo. CSL shedding Coccidia B2007a2428.3%212008a156138.3%932009a22700.0%00201016318.8%212011981111.2%5620123725.4%11Total558315.6%1912
a Samples obtained from 2007 to 2009 were reported previously (Carlson-Bremer et al., 2012b).
description: Published as part of Girard, Yvette A., Johnson, Christine K., Fritz, Heather M., Shapiro, Karen, Packham, Andrea E., Melli, Ann C., Carlson-Bremer, Daphne, Gulland, Frances M., Rejmanek, Daniel & Conrad, Patricia A., 2016, Detection and characterization of diverse coccidian protozoa shed by California sea lions, pp. 10 in International Journal for Parasitology: Parasites and Wildlife 5 (1) on page 10, DOI: 10.1016/j.ijppaw.2015.11.003, http://zenodo.org/record/10668346
DOI: 10.5281/zenodo.15158914
title: Table 3 in Detection and characterization of diverse coccidian protozoa shed by California sea lions

description: Table 3 Prevalence and genetic diversity of coccidian species identified by microscopy in fecal samples of free-ranging California sea lions at coastal haul-out sites.
Location (Sample identifier)No. samples examinedTime periodNo. oocyst-positive samplesSample ID (Coccidian species)for oocysts(Prevalence)White Rock (WR-)94July 2011 ‾ August 20123 (3.2%)WR101 (Coccidia A)WR111 (uncharacterized) aWR121 (Coccidia A)Ano ̃Nuevo (̃Ano-)48May 2011 ‾ October 20114 (8.3%)̃Ano11 (novel)bÃno44 (Coccidia B)Ãno50 (Coccidia B)Ãno53 (Coccidia A)Point Lobos (PL-)70August 2011 ‾ Sept 20126 (8.6%)PL11 (Coccidia B + S. neurona -like c)PL 27 (Coccidia A + S. neurona -like c)PL50 (Coccidia A)PL58 (Coccidia B)PL68 (Coccidia A)PL75 (Coccidia B)Total24413 (5.3%)6 Coccidia A5 Coccidia B2 S. neurona -like1 uncharacterized a1 novel b
a Oocysts were identified by microscopy during isolation, but DNA was insufficient for molecular characterization.
b The amplified ITS-1 region of ̃Ano11 is genetically distinct from other coccidian isolates (See Fig. 1).
c The presence of Sarcocystis neurona -like DNA was confirmed by PCR and sequence analysis. Sporocysts were not identified in fecal samples by microscopy.
description: Published as part of Girard, Yvette A., Johnson, Christine K., Fritz, Heather M., Shapiro, Karen, Packham, Andrea E., Melli, Ann C., Carlson-Bremer, Daphne, Gulland, Frances M., Rejmanek, Daniel & Conrad, Patricia A., 2016, Detection and characterization of diverse coccidian protozoa shed by California sea lions, pp. 11 in International Journal for Parasitology: Parasites and Wildlife 5 (1) on page 11, DOI: 10.1016/j.ijppaw.2015.11.003, http://zenodo.org/record/10668346
DOI: 10.5281/zenodo.15158915
title: Table 3 in Detection and characterization of diverse coccidian protozoa shed by California sea lions

description: Table 3 Prevalence and genetic diversity of coccidian species identified by microscopy in fecal samples of free-ranging California sea lions at coastal haul-out sites.
Location (Sample identifier)No. samples examinedTime periodNo. oocyst-positive samplesSample ID (Coccidian species)for oocysts(Prevalence)White Rock (WR-)94July 2011 ‾ August 20123 (3.2%)WR101 (Coccidia A)WR111 (uncharacterized) aWR121 (Coccidia A)Ano ̃Nuevo (̃Ano-)48May 2011 ‾ October 20114 (8.3%)̃Ano11 (novel)bÃno44 (Coccidia B)Ãno50 (Coccidia B)Ãno53 (Coccidia A)Point Lobos (PL-)70August 2011 ‾ Sept 20126 (8.6%)PL11 (Coccidia B + S. neurona -like c)PL 27 (Coccidia A + S. neurona -like c)PL50 (Coccidia A)PL58 (Coccidia B)PL68 (Coccidia A)PL75 (Coccidia B)Total24413 (5.3%)6 Coccidia A5 Coccidia B2 S. neurona -like1 uncharacterized a1 novel b
a Oocysts were identified by microscopy during isolation, but DNA was insufficient for molecular characterization.
b The amplified ITS-1 region of ̃Ano11 is genetically distinct from other coccidian isolates (See Fig. 1).
c The presence of Sarcocystis neurona -like DNA was confirmed by PCR and sequence analysis. Sporocysts were not identified in fecal samples by microscopy.
description: Published as part of Girard, Yvette A., Johnson, Christine K., Fritz, Heather M., Shapiro, Karen, Packham, Andrea E., Melli, Ann C., Carlson-Bremer, Daphne, Gulland, Frances M., Rejmanek, Daniel & Conrad, Patricia A., 2016, Detection and characterization of diverse coccidian protozoa shed by California sea lions, pp. 11 in International Journal for Parasitology: Parasites and Wildlife 5 (1) on page 11, DOI: 10.1016/j.ijppaw.2015.11.003, http://zenodo.org/record/10668346
DOI: 10.5281/zenodo.15158916
title: Table 4 in Detection and characterization of diverse coccidian protozoa shed by California sea lions

description: Table 4 Characterization of zoites grown in MA104 cell cultures inoculated with sporulated, excysted oocysts of Coccidia A and B from California sea lion (CSL-) fecal samples 10089, 10092, 10100 and 10266. Antigenic reactivity of zoites to Sarcocystis neurona antisera from a horse and a sea lion (CSL 9878) by indirect fluorescent antibody test (IFAT). PCR amplification of zoite DNA confirmed that zoites were similar to S. neurona (Sn).
CSL10089CSL10092CSL10100CSL10266MA104 (control)Fecal oocyst coccidian sequence type aAA & BA & BANTZoites observed in MA104 cell culture+++––IFAT results with antigen slides of CSL zoites in MA104 cell cultureS. neurona antiseraHorse 6814411:3201:1601:320NTNTCSL98781:10,2401:12801:640NTNTPCR results with approximate amplicon size (coccidian species/genotype b)Genetic locus/primersITS-1 (pan-coccidian) c1000 bp (Sn)1000 bp (Sn)/ 400 bp1000 bp (Sn)/400 bp (Coccidia A)Negative(Coccidia A)400 bp (Coccidia A + B)ITS1500 (S. neurona / falcatula)500 bp (Sn)500 bp (Sn)500 bp (Sn)NegativeNegativeSn7150 bp (Sn/CA17)150 bp (Sn/CA17)150 bp (Sn/CA17)NTNTSn9150 bp (Sn/GT18)150 bp (Sn/GT18)150 bp (Sn/GT18)NTNTSn-ITS600 bp (Sn)600 bp (Sn)600 bp (Sn)NTNTSnSAG 1-5-61000 bp (Sn)1000 bp (Sn)1000 bp (Sn)NTNTSnSAG31000 bp (Sn)1000 bp (Sn)1000 bp (Sn)NTNTSnSAG41000 bp (Sn)1000 bp (Sn)1000 bp (Sn)NTNT
NT = not tested.
a Coccidian species determined based on analysis of DNA from frozen pelleted oocsyts from feces and not culture inoculum, using ITS-1 locus PCR and sequencing.
b Based on genetic similarity across unambiguous sequence.
c 400 bp amplicon was only observed the first 1 ‾ 2 wks post-inoculation. The 1000 bp PCR products were amplified continuously in CSL10089, CSL10092, and CSL10100 cultures.
description: Published as part of Girard, Yvette A., Johnson, Christine K., Fritz, Heather M., Shapiro, Karen, Packham, Andrea E., Melli, Ann C., Carlson-Bremer, Daphne, Gulland, Frances M., Rejmanek, Daniel & Conrad, Patricia A., 2016, Detection and characterization of diverse coccidian protozoa shed by California sea lions, pp. 12 in International Journal for Parasitology: Parasites and Wildlife 5 (1) on page 12, DOI: 10.1016/j.ijppaw.2015.11.003, http://zenodo.org/record/10668346