cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14783161
title: Assessing Software Evolution with the Stickiness Score: Evaluating Code Persistence Across Files, Folders, and Developers- Replication Package

description: This package contains data and source code for the Devotion backend, frontend, and hypothesis testing. It is organized into two main folders:



Devotion: Contains the source code for both the frontend and backend of Devotion.

Hypothesis_Testing: Includes the preprocess-input folder, where Devotion’s output files are processed for hypothesis testing. The tokens folder requires a Git token. Other subfolders contain data, source code for hypothesis testing, test results, and plots corresponding to research questions.


Below are the instructions for running the Python scripts.



Instructions




Prerequisites


Before running the backend, install these dependencies using the following command:



pip install -r requirements.txt

 




Running the Backend


To run the backend of Devotion, navigate to the Devotion folder and use the following command:



python ./Devotion/runner.py <GitHub_Repo_URL> <Log_File_Name>

 




Running the Web Application


Before starting the web application, ensure all dependencies are installed by running:



npm install

 


To start the web application of Devotion, navigate to the client folder and run:



cd ./Devotion/frontend/client
npm run start

 




Running the Hypothesis Testing Code






Write your GitHub token:



Save your GitHub token in the Hypothesis_Testing/tokens/github-token.txt file to allow the scripts to access the GitHub API.





Place the required files:



Copy authors.json and folder_structure.json from the Devotion/frontend/client/src folder into the Hypothesis_Testing/preprocess-input folder, inside a new folder named after your project.





Execute the hypothesis testing for each research question:



First, run the Python script located in the preprocess folder.

Then, run the Python script in the hypothesis folder.





Output:



Results, including data points, plots, and the outcomes of normality and correlation tests, will be saved in the hypothesis-output folder.
DOI: 10.15468/dl.y4q54u
title: Occurrence Download

description: A dataset containing 87271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canis latrans Say, 1823"
 ]
}

 The dataset includes 87271 records from 224 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007056-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14689591
title: FQ Format DNA Data of an entity known as "eiritana" 7z.001
title: EIRI_FQ.7z.001

description: FQ data for the entity known as "eiritana"

7z.001

use with notification / attribution 

contact for archive pw
DOI: 10.5281/zenodo.14689592
title: FQ Format DNA Data of an entity known as "eiritana" 7z.001
title: EIRI_FQ.7z.001

description: FQ data for the entity known as "eiritana"

7z.001

use with notification / attribution 

contact for archive pw
DOI: 10.5281/zenodo.13864227
title: Time-lapse electrical resistivity tomography and seismic reflection imaging of a shallow ground-water aquifer (0-50 m): Mississippi River levee seepage across the Duncan Point bar, Baton Rouge, Louisiana, U.S.A.

description: We provide ground-based electrical resistivity (part 1-uploaded Sept. 30, 2024) and seismic reflection (part 2 TBD) data from Farr Park, approximately 2.5 km S of LSU Baton Rouge campus along the east bank fo the Mississippi River
DOI: 10.5281/zenodo.14776025
title: Time-lapse electrical resistivity tomography and seismic reflection imaging of a shallow ground-water aquifer (0-50 m): Mississippi River levee seepage across the Duncan Point bar, Baton Rouge, Louisiana, U.S.A.

description: We provide ground-based electrical resistivity (part 1-uploaded Sept. 30, 2024) and seismic reflection data from Farr Park, approximately 2.5 km S of LSU Baton Rouge campus along the east bank fo the Mississippi River
DOI: 10.5281/zenodo.14776492
title: Time-lapse electrical resistivity tomography and seismic reflection imaging of a shallow ground-water aquifer (0-50 m): Mississippi River levee seepage across the Duncan Point bar, Baton Rouge, Louisiana, U.S.A.

description:  

The seismic data were assembled in Seismic Unix format, a shortened version of the SEG-Y format (Society of Exploration Geophysicists Exchange Format-Y https: //seg. org/Publications/SEG-Technical-Standards), that has the 3200-byte EBCDIC and 400-byte tape header removed. The data uploaded online (https://zenodo.org/records/14776025) is a CMP brute-stacked seismic section.  

During data collection, shotpoint location changed proceeding along a 136-degree azimuth (south-easterly direction; Figure 1 ), and spaced every 1 m.

A total of 48, horizontal-component 28-Hz nominal geophones were placed every one meter and shotpoints were located half-way between geophones. Geophones remained fixed at their locations throughout the survey and so the CMP spacing is nominally 0.5-m but fold varies linearly from a value of 1 from either side of the survey to a central maximum of 24.  The seismic source consisted of a partially buried 20-lb steel I-beam struck repeatedly on either side three times by an 8-lb sledge hammer.  Data of the same striking polarity were added in-phase in the field.  Data with opposing polarity at each shotpoint location were subtracted later to enhance SH-wave data and suppress converted SH-to-P waves. 

Seismic processing is minimal and consists of standard surface-wave muting, elimination of bad seismic traces, normal moveout, bandpass filtering (between 12 Hz and 50 Hz) and preliminary stacking with trace mixing every 3 CMPs.  The data were stacked with a single velocity throughout that ranged from 80 m/'s (Vs) at 0.2 s, to 100 m/s at 0.35 s and reached 180 m/s at 0.5 s of two-way traveltime.
DOI: 10.5281/zenodo.13864226
title: Time-lapse electrical resistivity tomography and seismic reflection imaging of a shallow ground-water aquifer (0-50 m): Mississippi River levee seepage across the Duncan Point bar, Baton Rouge, Louisiana, U.S.A.

description: The electrical resisitivity raw data files are slightly processed to remove bad data points but can be inverted using tomographic inversion code. 

The seismic data were assembled in Seismic Unix format, a shortened version of the SEG-Y format (Society of Exploration Geophysicists Exchange Format-Y https: //seg. org/Publications/SEG-Technical-Standards), that has the 3200-byte EBCDIC and 400-byte tape header removed. The data uploaded online (https://zenodo.org/records/14776025) is a CMP brute-stacked seismic section.  

During data collection, shotpoint location changed proceeding along a 136-degree azimuth (south-easterly direction), and spaced every 1 m.

A total of 48, horizontal-component 28-Hz nominal geophones were placed every one meter and shotpoints were located half-way between geophones. Geophones remained fixed at their locations throughout the survey and so the CMP spacing is nominally 0.5-m but fold varies linearly from a value of 1 from either side of the survey to a central maximum of 24.  The seismic source consisted of a partially buried 20-lb steel I-beam struck repeatedly on either side three times by an 8-lb sledge hammer.  Data of the same striking polarity were added in-phase in the field.  Data with opposing polarity at each shotpoint location were subtracted later to enhance SH-wave data and suppress converted SH-to-P waves.

Seismic processing is minimal and consists of standard surface-wave muting, elimination of bad seismic traces, normal moveout, bandpass filtering (between 12 Hz and 50 Hz) and preliminary stacking with trace mixing every 3 CMPs.  The data were stacked with a single velocity throughout that ranged from 80 m/s (Vs) at 0.2 s, to 100 m/s at 0.35 s and reached 180 m/s at 0.5 s of two-way traveltime.
DOI: 10.5281/zenodo.14776605
title: Time-lapse electrical resistivity tomography and seismic reflection imaging of a shallow ground-water aquifer (0-50 m): Mississippi River levee seepage across the Duncan Point bar, Baton Rouge, Louisiana, U.S.A.

description: The electrical resisitivity raw data files are slightly processed to remove bad data points but can be inverted using tomographic inversion code. 

The seismic data were assembled in Seismic Unix format, a shortened version of the SEG-Y format (Society of Exploration Geophysicists Exchange Format-Y https: //seg. org/Publications/SEG-Technical-Standards), that has the 3200-byte EBCDIC and 400-byte tape header removed. The data uploaded online (https://zenodo.org/records/14776025) is a CMP brute-stacked seismic section.  

During data collection, shotpoint location changed proceeding along a 136-degree azimuth (south-easterly direction), and spaced every 1 m.

A total of 48, horizontal-component 28-Hz nominal geophones were placed every one meter and shotpoints were located half-way between geophones. Geophones remained fixed at their locations throughout the survey and so the CMP spacing is nominally 0.5-m but fold varies linearly from a value of 1 from either side of the survey to a central maximum of 24.  The seismic source consisted of a partially buried 20-lb steel I-beam struck repeatedly on either side three times by an 8-lb sledge hammer.  Data of the same striking polarity were added in-phase in the field.  Data with opposing polarity at each shotpoint location were subtracted later to enhance SH-wave data and suppress converted SH-to-P waves.

Seismic processing is minimal and consists of standard surface-wave muting, elimination of bad seismic traces, normal moveout, bandpass filtering (between 12 Hz and 50 Hz) and preliminary stacking with trace mixing every 3 CMPs.  The data were stacked with a single velocity throughout that ranged from 80 m/s (Vs) at 0.2 s, to 100 m/s at 0.35 s and reached 180 m/s at 0.5 s of two-way traveltime.
DOI: 10.15468/dl.gdjebm
title: Occurrence Download

description: A dataset containing 75 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "TaxonKey is Erigeron decumbens Nutt.",
 "Year 1995-2025"
 ]
}

 The dataset includes 75 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007059-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26093/cds/vizier.36830072
title: Gaia RVS benchmark stars. II.

description: VizieR online Data Catalogue associated with article published in journal Astronomy and Astrophysics with title ' The Gaia RVS benchmark stars. II. A sample of stars selected for their Gaia high radial velocity.' (bibcode: 2024A&A...683A..72C)
DOI: 10.5281/zenodo.14783215
title: USGS USWTDB - U.S. Wind Turbine Database

description: The United States Wind Turbine Database (USWTDB) provides the locations of land-based and offshore wind turbines in the United States, corresponding wind project information, and turbine technical specifications. Wind turbine records are collected and compiled from various public and private sources, digitized and position-verified from aerial imagery, and quality checked. The USWTDB is available for download in a variety of tabular and geospatial file formats, to meet a range of user/software needs. Dynamic web services are available for users that wish to access the USWTDB as a Representational State Transfer Services (RESTful) web service. Archived from 
https://energy.usgs.gov/uswtdb/

This archive contains raw input data for the Public Utility Data Liberation (PUDL)
software developed by Catalyst Cooperative. It is
organized into Frictionless
Data Packages. For additional information about this data and PUDL, see the
following resources:


  
The PUDL Repository on GitHub
  
PUDL Documentation
  
Other Catalyst Cooperative data archives
DOI: 10.15468/dl.vrjkqp
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bolitoglossa oresbia"
 ]
}

 The dataset includes 38 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064353-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkdn99
title: Occurrence Download

description: A dataset containing 14149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anamidae",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14149 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064352-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18038334
title: Disproving General Relativity: Gravity as the Large-Scale Emergence of Magnetic Alignment

description: This experimental report challenges the foundational assumption of General Relativity — that gravity emerges from the curvature of spacetime. Through slow-motion demonstrations using rectangular and spherical magnets, we reveal three key findings: 








Magnetic attraction and repulsion are not symmetrical. 










In free systems, repulsion rarely manifests as sustained separation and instead generates torque that reorients bodies toward attraction. 










When curvature is introduced — as in spherical systems, the true geometry of atoms, planets, vesicles, and stars — stable repulsion becomes physically impossible. 






Our results show that gravity is not a fundamental geometric distortion but a large-scale statistical consequence of universal magnetic alignment. The findings reposition gravity as an emergent magnetic phenomenon arising from rotational degrees of freedom in a curved universe. 

Crucially, this study documents an anomaly where opposite magnetic poles failed to attract in a flat-plane configuration, with attraction only triggering upon the introduction of angular inclination (torque). This suggests that gravitational attraction is not an inherent property of mass or spacetime curvature, but the inevitable outcome of magnetic interaction in a universe of spherical bodies possessing rotational degrees of freedom.
DOI: 10.15468/dl.tp28uw
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bolitoglossa orestes"
 ]
}

 The dataset includes 39 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064354-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.27xmyf
title: Occurrence Download

description: A dataset containing 4679500 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anser anser",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-180 -90, 180 -90, 180 90, -180 90, -180 -90))"
 ]
}

 The dataset includes 4679500 records from 1486 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064347-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/csc2.obs.13229
title: Chandra X-ray Observatory ObsId 13229

description: CSC uses combined (i.e. overlapping) Chandra observations for detecting X-ray sources. This allows the catalog to include significantly fainter sources than CSC 1.1. The set of overlapping observations that have been combined in this way is known as a "stack".
DOI: 10.15468/dl.7q2dst
title: Occurrence Download

description: A dataset containing 412 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bromus bromoideus (Lej.) Crép."
 ]
}

 The dataset includes 412 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003937-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmsypq
title: Occurrence Download

description: A dataset containing 20243 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Sweden",
 "Geometry POLYGON((8.08537 63.16329,18.78605 63.16329,18.78605 67.43697,8.08537 67.43697,8.08537 63.16329))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ficedula hypoleuca (Pallas, 1764)"
 ]
}

 The dataset includes 20243 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0109298-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/csc2.obs.13279
title: Chandra X-ray Observatory ObsId 13279

description: CSC uses combined (i.e. overlapping) Chandra observations for detecting X-ray sources. This allows the catalog to include significantly fainter sources than CSC 1.1. The set of overlapping observations that have been combined in this way is known as a "stack".
DOI: 10.15468/dl.hf9cuk
title: Occurrence Download

description: A dataset containing 18909 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1970-2000",
 "HasCoordinate is true",
 {
 "or" : [
 "TaxonKey is Fagopyrum homotropicum Ohnishi",
 "TaxonKey is Trachyspermum roxburghianum (DC.) H.Wolff",
 "TaxonKey is Psophocarpus grandiflorus R.Wilczek",
 "TaxonKey is Cynara cardunculus L.",
 "TaxonKey is Carum roxburghianum (DC.) Kurz",
 "TaxonKey is Hodgsonia macrocarpa (Blume) Cogn.",
 "TaxonKey is Spilanthes acmella DC.",
 "TaxonKey is Pueraria phaseoloides (Roxb.) Benth.",
 "TaxonKey is Musa acuminata Colla",
 "TaxonKey is Luffa cylindrica (L.) Roem",
 "TaxonKey is Hibiscus radiatus Cav.",
 "TaxonKey is Abelmoschus manihot (L.) Medik.",
 "TaxonKey is Abelmoschus esculentus (L.) Moench",
 "TaxonKey is Dioscorea alata L.",
 "TaxonKey is Vigna unguiculata (L.) Walp.",
 "TaxonKey is Ocimum basilicum L.",
 "TaxonKey is Hibiscus sabdariffa L.",
 "TaxonKey is Gossypium herbaceum L.",
 "TaxonKey is Dioscorea cayenensis Lam.",
 "TaxonKey is Corchorus olitorius L.",
 "TaxonKey is Canavalia gladiata (Jacq.) DC.",
 "TaxonKey is Solanum acaule Bitter",
 "TaxonKey is Solanum tuberosum L.",
 "TaxonKey is Triticum timopheevii (Zhuk.) Zhuk.",
 "TaxonKey is Triticum sphaerococcum Percival",
 "TaxonKey is Triticum dicoccoides (Körnicke) G.Schweinfurth"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 18909 records from 325 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008118-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/csc2.obs.13280
title: Chandra X-ray Observatory ObsId 13280

description: CSC uses combined (i.e. overlapping) Chandra observations for detecting X-ray sources. This allows the catalog to include significantly fainter sources than CSC 1.1. The set of overlapping observations that have been combined in this way is known as a "stack".
DOI: 10.15468/dl.lztlvg
title: Occurrence Download

description: A dataset containing 35936 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 {
 "or" : [
 "DatasetKey is SEFSC CAGES Alabama Fish Length Data with CPUE",
 "DatasetKey is TPWD HARC Texas Coastal Fisheries San Antonio Bay Trawl",
 "DatasetKey is TPWD HARC Texas Coastal Fisheries Aransas Bay Trawl",
 "DatasetKey is VIMS Chesapeake Bay Multispecies Monitoring and Assessment Program",
 "DatasetKey is TPWD HARC Texas Coastal Fisheries Matagorda Bay Bag Seine",
 "DatasetKey is TPWD HARC Texas Coastal Fisheries Matagorda Bay Trawl",
 "DatasetKey is TPWD HARC Texas Coastal Fisheries Aransas Bay Bag Seine",
 "DatasetKey is TPWD HARC Texas Coastal Fisheries San Antonio Bay Bag Seine",
 "DatasetKey is TPWD HARC Texas Coastal Fisheries Lower Laguna Madre Bag Seine",
 "DatasetKey is TPWD HARC Texas Coastal Fisheries Corpus Christi Bay Bag Seine"
 ]
 },
 "TaxonKey is Callinectes sapidus Rathbun, 1896"
 ]
}

 The dataset includes 35936 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003537-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3qbju0
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Sapajus cay (Illiger, 1815)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 31 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033182-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/csc2.obs.13281
title: Chandra X-ray Observatory ObsId 13281

description: CSC uses combined (i.e. overlapping) Chandra observations for detecting X-ray sources. This allows the catalog to include significantly fainter sources than CSC 1.1. The set of overlapping observations that have been combined in this way is known as a "stack".
DOI: 10.15468/dl.9wn5ee
title: Occurrence Download

description: A dataset containing 3361 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Antilophia galeata (Lichtenstein, 1823)"
 ]
}

 The dataset includes 3361 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050254-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jb65mn
title: Occurrence Download

description: A dataset containing 17903 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1970-2000",
 "HasCoordinate is true",
 "TaxonKey is Sorghum bicolor (L.) Moench",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17903 records from 164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016329-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/csc2.obs.07284
title: Chandra X-ray Observatory ObsId 07284

description: CSC uses combined (i.e. overlapping) Chandra observations for detecting X-ray sources. This allows the catalog to include significantly fainter sources than CSC 1.1. The set of overlapping observations that have been combined in this way is known as a "stack".
DOI: 10.15468/dl.rv2zhz
title: Occurrence Download

description: A dataset containing 2755482 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Clangula hyemalis (Linnaeus, 1758), Somateria fischeri (J.F.Brandt, 1847), Somateria spectabilis (Linnaeus, 1758), Somatidia spectabilis Broun, 1917, Somatidia spectabilis Broun, 1917, Somateria mollissima (Linnaeus, 1758))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2755482 records from 390 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0337213-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/csc2.obs.06202
title: Chandra X-ray Observatory ObsId 06202

description: CSC uses combined (i.e. overlapping) Chandra observations for detecting X-ray sources. This allows the catalog to include significantly fainter sources than CSC 1.1. The set of overlapping observations that have been combined in this way is known as a "stack".