cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1094343.v1
title: Gaussian Job Archive for C14H16O

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1094340.v1
title: Gaussian Job Archive for C15H14O

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1094339.v1
title: Analysis of completed US phase 3 clinical trials (n=5051) registered at ClinicalTrials.gov (first received: 01/01/2002 to 01/01/2014)

description: "The majority of US phase 3 trials were retrospectively registered. Only three out of ten studies that were completed before January 2011 have results available, data was submitted to ClinicalTrials.gov within12 months by 34% of the investigators." (1) Complete analysis: 1. Ramirez JH, Palacios M. Re: The US requirement to deposit trial data within a year is unworkable. March 17, 2014. URL: http://www.bmj.com/node/753103 This database complies with the terms and conditions of ClinicalTrials.gov (http://clinicaltrials.gov/ct2/about-site/terms-conditions) and the WHO ICTRP (http://www.who.int/ictrp/search/download/en/) for using downloaded data.
DOI: 10.6084/m9.figshare.1094338.v1
title: Expression of concern about tamsulosin: over three quarters of human studies are unpublished

description: Further details are available in the following URLs: - http://www.bmj.com/content/347/bmj.f6492 - http://www.bmj.com/node/758233 - http://www.bmj.com/node/759360 - http://www.bmj.com/node/755022
DOI: 10.6084/m9.figshare.1094339.v2
title: Analysis of completed US phase 3 clinical trials (n=5051) registered at ClinicalTrials.gov (first received: 01/01/2002 to 01/01/2014)

description: "The majority of US phase 3 trials were retrospectively registered. Only three out of ten studies that were completed before January 2011 have results available, data was submitted to ClinicalTrials.gov within12 months by 34% of the investigators." (1) Complete analysis: 1. Ramirez JH, Palacios M. Re: The US requirement to deposit trial data within a year is unworkable. March 17, 2014. URL: http://www.bmj.com/node/753103 This database complies with the terms and conditions of ClinicalTrials.gov (http://clinicaltrials.gov/ct2/about-site/terms-conditions) and the WHO ICTRP (http://www.who.int/ictrp/search/download/en/) for using downloaded data.
DOI: 10.6084/m9.figshare.1094338.v2
title: Expression of concern about tamsulosin: over three quarters of human studies are unpublished

description: Further details are available in the following URLs: - http://www.bmj.com/content/347/bmj.f6492 - http://www.bmj.com/node/758233 - http://www.bmj.com/node/759360 - http://www.bmj.com/node/755022
DOI: 10.6084/m9.figshare.1094339.v3
title: Analysis of completed US phase 3 clinical trials (n=5051) registered at ClinicalTrials.gov (first received: 01/01/2002 to 01/01/2014)

description: "The majority of US phase 3 trials were retrospectively registered. Only three out of ten studies that were completed before January 2011 have results available, data was submitted to ClinicalTrials.gov within12 months by 34% of the investigators." (1) Complete analysis: 1. Ramirez JH, Palacios M. Re: The US requirement to deposit trial data within a year is unworkable. March 17, 2014. URL: http://www.bmj.com/node/753103 This database complies with the terms and conditions of ClinicalTrials.gov (http://clinicaltrials.gov/ct2/about-site/terms-conditions) and the WHO ICTRP (http://www.who.int/ictrp/search/download/en/) for using downloaded data.
DOI: 10.6084/m9.figshare.1094339.v4
title: Analysis of completed US phase 3 clinical trials (n=5051) registered at ClinicalTrials.gov (first received: 01/01/2002 to 01/01/2014)

description: "The majority of US phase 3 trials were retrospectively registered. Only three out of ten studies that were completed before January 2011 have results available, data was submitted to ClinicalTrials.gov within12 months by 34% of the investigators." (1) Analysis of unpublished studies follows (infographics). (2) <strong>Current number of completed US phase 3 trials (registered between 2002-2014)</strong> <strong><em>1. Clinical trials with results and without results</em></strong> Intervention = drug | URL: http://goo.gl/s0JciJ<br>Intervention = biological | URL: http://goo.gl/ARQFnJ <strong><em>2. Clinical trials with results</em></strong> Intervention = drug | URL: http://goo.gl/s0JciJ<br>Intervention = biological | URL: http://goo.gl/ARQFnJ <strong>References</strong> 1. Ramirez JH, Palacios M. Re: The US requirement to deposit trial data within a year is unworkable. March 17, 2014. URL: http://www.bmj.com/node/753103 2. Ramirez, Jorge H (2014): Infographics: Unpublished US phase 3 clinical trials (2002-2012) completed before Jan 2011 = 50.8%. figshare.<br>http://dx.doi.org/10.6084/m9.figshare.1121675Retrieved 23:05, Jul 30, 2014 (GMT) This database complies with the terms and conditions of ClinicalTrials.gov (http://clinicaltrials.gov/ct2/about-site/terms-conditions) and the WHO ICTRP (http://www.who.int/ictrp/search/download/en/) for using downloaded data.
DOI: 10.6084/m9.figshare.1094338.v4
title: Expression of concern about tamsulosin: over three quarters of human studies are unpublished

description: Further details are available in the following URLs: - http://www.bmj.com/content/347/bmj.f6492 - http://www.bmj.com/node/758233 - http://www.bmj.com/node/759360 - http://www.bmj.com/node/755022 Database complies with the terms and conditions of ClinicalTrials.gov (available at:http://clinicaltrials.gov/ct2/about-site/terms-conditions) and the WHO ICTRP (available at: http://www.who.int/ictrp/search/download/en/) for using downloaded data.
DOI: 10.6084/m9.figshare.1094338.v3
title: Expression of concern about tamsulosin: over three quarters of human studies are unpublished

description: Further details are available in the following URLs: - http://www.bmj.com/content/347/bmj.f6492 - http://www.bmj.com/node/758233 - http://www.bmj.com/node/759360 - http://www.bmj.com/node/755022 Database complies with the terms and conditions of ClinicalTrials.gov (available at:http://clinicaltrials.gov/ct2/about-site/terms-conditions) and the WHO ICTRP (available at: http://www.who.int/ictrp/search/download/en/) for using downloaded data.
DOI: 10.6084/m9.figshare.1093878
title: First African record of the Miocene Asian mouse-deer <i>Siamotragulus</i> (Mammalia, Ruminantia, Tragulidae): implications for the phylogeny and evolutionary history of the advanced selenodont tragulids

description: New remains of the small tragulid <i>Dorcatherium songhorensis</i> Whitworth, 1958 from the Early Miocene fossil site of Napak XXI (Uganda) include the first significant sample of postcranial bones from this species ever described. The limb bones of this tragulid are very similar to that described in the Miocene Asian long-legged tragulids of the genus <i>Siamotragulus</i> Thomas <i>et al</i>., 1990, a type previously unknown in the African Miocene. A cladistic analysis links <i>D. songhorensis</i> to a <i>Siamotragulus</i> clade as its basal offshoot, so we propose the name <i>Siamotragulus songhorensis</i> (Whitworth, 1958) for this species. Also, the <i>Siamotragulus</i> clade belongs to a monophyletic group that includes <i>Afrotragulus</i> Sánchez <i>et al</i>., 2010 and the extant Asian genera <i>Moschiola</i> and <i>Tragulus</i>. This inclusive clade is characterized by both a derived selenodont dentition and an advanced postcranial skeleton. Additionally <i>Siamotragulus</i> shows some cursorial refinements reflected in its postcranial skeleton including the pecoran-like metatarsals III–IV. <i>Siamotragulus songhorensis</i> shows that the genus <i>Siamotragulus</i> was not endemic to Asia as previously thought, and that a highly diverse guild of tragulids, including different members of the advanced selenodont clade, inhabited Africa as early as the Early Miocene (19–20 Ma).
DOI: 10.6084/m9.figshare.1093878.v2
title: First African record of the Miocene Asian mouse-deer <i>Siamotragulus</i> (Mammalia, Ruminantia, Tragulidae): implications for the phylogeny and evolutionary history of the advanced selenodont tragulids

description: New remains of the small tragulid <i>Dorcatherium songhorensis</i> Whitworth, 1958 from the Early Miocene fossil site of Napak XXI (Uganda) include the first significant sample of postcranial bones from this species ever described. The limb bones of this tragulid are very similar to that described in the Miocene Asian long-legged tragulids of the genus <i>Siamotragulus</i> Thomas <i>et al</i>., 1990, a type previously unknown in the African Miocene. A cladistic analysis links <i>D. songhorensis</i> to a <i>Siamotragulus</i> clade as its basal offshoot, so we propose the name <i>Siamotragulus songhorensis</i> (Whitworth, 1958) for this species. Also, the <i>Siamotragulus</i> clade belongs to a monophyletic group that includes <i>Afrotragulus</i> Sánchez <i>et al</i>., 2010 and the extant Asian genera <i>Moschiola</i> and <i>Tragulus</i>. This inclusive clade is characterized by both a derived selenodont dentition and an advanced postcranial skeleton. Additionally <i>Siamotragulus</i> shows some cursorial refinements reflected in its postcranial skeleton including the pecoran-like metatarsals III–IV. <i>Siamotragulus songhorensis</i> shows that the genus <i>Siamotragulus</i> was not endemic to Asia as previously thought, and that a highly diverse guild of tragulids, including different members of the advanced selenodont clade, inhabited Africa as early as the Early Miocene (19–20 Ma).
DOI: 10.6084/m9.figshare.1093834
title: Detailed behaviour ABM of jaguar movements

description: Comprehensive code for entire ABM model. Programmed in Java using te Repast Simphony modelling software environment. Supplementary information for manuscript submitted to Ecological Modelling.
DOI: 10.6084/m9.figshare.1093878.v1
title: First African record of the Miocene Asian mouse-deer <i>Siamotragulus</i> (Mammalia, Ruminantia, Tragulidae): implications for the phylogeny and evolutionary history of the advanced selenodont tragulids

description: New remains of the small tragulid <i>Dorcatherium songhorensis</i> Whitworth, 1958 from the Early Miocene fossil site of Napak XXI (Uganda) include the first significant sample of postcranial bones from this species ever described. The limb bones of this tragulid are very similar to that described in the Miocene Asian long-legged tragulids of the genus <i>Siamotragulus</i> Thomas <i>et al</i>., 1990, a type previously unknown in the African Miocene. A cladistic analysis links <i>D. songhorensis</i> to a <i>Siamotragulus</i> clade as its basal offshoot, so we propose the name <i>Siamotragulus songhorensis</i> (Whitworth, 1958) for this species. Also, the <i>Siamotragulus</i> clade belongs to a monophyletic group that includes <i>Afrotragulus</i> Sánchez <i>et al</i>., 2010 and the extant Asian genera <i>Moschiola</i> and <i>Tragulus</i>. This inclusive clade is characterized by both a derived selenodont dentition and an advanced postcranial skeleton. Additionally <i>Siamotragulus</i> shows some cursorial refinements reflected in its postcranial skeleton including the pecoran-like metatarsals III–IV. <i>Siamotragulus songhorensis</i> shows that the genus <i>Siamotragulus</i> was not endemic to Asia as previously thought, and that a highly diverse guild of tragulids, including different members of the advanced selenodont clade, inhabited Africa as early as the Early Miocene (19–20 Ma).
DOI: 10.6084/m9.figshare.1093997.v1
title: Data (i.e., evidence) about evidence based medicine (EBM) and clinical practice guidelines (GPC)

description: PubMed publication trends (1992 to 2014): evidence based medicine (EBM) and clinical practice guidelines (CPG). - Raw data - Interactive figures - PubMed search terms Numbers speak for themselves: evidence based medicine is broken and in crisis.
DOI: 10.6084/m9.figshare.1093804
title: Notoungulate faunas of north-western Argentina: new findings of early-diverging forms from the Eocene Geste Formation

description: Vertebrate-bearing deposits of the Geste Formation (Late Eocene) crop out in the Puna of Catamarca and Salta, north-western Argentina, and have yielded specimens of a variety of clades. Among these, mammals have particular importance since their record shows some taxonomic peculiarities when compared with that of adjacent units. Here we describe new material that includes Notoungulata of generalized morphology, two morphotypes of basal typotherians, and two interatheriid taxa (including <i>Antofagastia turneri</i> gen. et sp. nov.). These findings increase the variety of groups and provide new information about previously known taxa for this unit. Three phylogenetic analyses with different taxonomic contexts were performed. The first analysis includes the specimen referred to as ‘Typotheria indet. A’ in a data matrix of Paleogene notoungulates containing taxa traditionally referred as ‘Oldfieldthomasiidae’. The specimen is grouped together with three ‘oldfielthomasiids’ (<i>Maxschlosseria</i>, <i>Ultrapithecus</i> and <i>Dolichostylodon</i>) in the resulting tree. The second analysis involves specimens referred to as ‘Typotheria indet. B’, ‘archaeohyracids’, mesotheriids and hegetotheriids. The results show these fossils to be part of a basal polytomy of ‘early archaeohyracids’. Finally, a third analysis was conducted with Interatheriidae as the ingroup which recovered <i>Antofagastia turneri</i> at the base of a node including extra-Patagonian forms of non-interatheriine interatheriids plus <i>Eopachyrucos</i> and interatheriines. Although <i>Antofagastia</i>, <i>Punapithecus</i> and Chilean extra-Patagonian forms share some features, such as small size, they do not comprise a distinct clade. The notoungulate record of the Geste Formation shows some singularities in the context of north-western Argentinean Paleogene units, the presence of interatheriids and ‘archaeohyracids’ being the most striking of these. The differences exhibited can be partially explained by temporal factors, since recent isotopic data points to a Late Eocene age for this unit. Biogeographical isolation represents another possible explanation, because these levels appear to be deposited in an isolated geographical and geological context, suggesting intermontane basin deposition or local wedge-top basins.http://zoobank.org/urn:lsid:zoobank.org:pub:690E818B-D2CD-4E93-9C34-8305E8D7F847
DOI: 10.6084/m9.figshare.1093997.v2
title: Database

description: PubMed publication trends (1992 to 2014): evidence based medicine and clinical practice guidelines. - Raw data - Interactive figures - PubMed search terms I believe the numbers speak for themselves: data show that evidence based medicine is broken and in crisis.
DOI: 10.6084/m9.figshare.1093804.v2
title: Notoungulate faunas of north-western Argentina: new findings of early-diverging forms from the Eocene Geste Formation

description: Vertebrate-bearing deposits of the Geste Formation (Late Eocene) crop out in the Puna of Catamarca and Salta, north-western Argentina, and have yielded specimens of a variety of clades. Among these, mammals have particular importance since their record shows some taxonomic peculiarities when compared with that of adjacent units. Here we describe new material that includes Notoungulata of generalized morphology, two morphotypes of basal typotherians, and two interatheriid taxa (including <i>Antofagastia turneri</i> gen. et sp. nov.). These findings increase the variety of groups and provide new information about previously known taxa for this unit. Three phylogenetic analyses with different taxonomic contexts were performed. The first analysis includes the specimen referred to as ‘Typotheria indet. A’ in a data matrix of Paleogene notoungulates containing taxa traditionally referred as ‘Oldfieldthomasiidae’. The specimen is grouped together with three ‘oldfielthomasiids’ (<i>Maxschlosseria</i>, <i>Ultrapithecus</i> and <i>Dolichostylodon</i>) in the resulting tree. The second analysis involves specimens referred to as ‘Typotheria indet. B’, ‘archaeohyracids’, mesotheriids and hegetotheriids. The results show these fossils to be part of a basal polytomy of ‘early archaeohyracids’. Finally, a third analysis was conducted with Interatheriidae as the ingroup which recovered <i>Antofagastia turneri</i> at the base of a node including extra-Patagonian forms of non-interatheriine interatheriids plus <i>Eopachyrucos</i> and interatheriines. Although <i>Antofagastia</i>, <i>Punapithecus</i> and Chilean extra-Patagonian forms share some features, such as small size, they do not comprise a distinct clade. The notoungulate record of the Geste Formation shows some singularities in the context of north-western Argentinean Paleogene units, the presence of interatheriids and ‘archaeohyracids’ being the most striking of these. The differences exhibited can be partially explained by temporal factors, since recent isotopic data points to a Late Eocene age for this unit. Biogeographical isolation represents another possible explanation, because these levels appear to be deposited in an isolated geographical and geological context, suggesting intermontane basin deposition or local wedge-top basins.http://zoobank.org/urn:lsid:zoobank.org:pub:690E818B-D2CD-4E93-9C34-8305E8D7F847
DOI: 10.6084/m9.figshare.1093829.v1
title: R-script from: Off-duty Behavior in a Biparentally Incubating, High-Arctic Breeding Shorebird: Effects of Sex, Time, and Weather

description: R Script for Analyses from manuscript “Off-duty Behavior in a Biparentally Incubating, High-Arctic Breeding Shorebird: Effects of Sex, Time, and Weather” by Bulla M, Stich E, Valcu M, and Kempenaers B prepared for submission. -------------------------------------------------------------------------------------------------------- Questions can be directed to: Martin Bulla (bulla.mar@gmail.com) -------------------------------------------------------------------------------------------------------- WHEN USING THIS R-SCRIPT, PLEACE CITE THE ORIGINAL MANUSCRIPT: Bulla M, Stich E, Valcu M, and Kempenaers B (in review) Off-duty Behavior in a Biparentally Incubating, High-Arctic Breeding Shorebird: Effects of Sex, Time, and Weather. ADDITIONALLY, PLEASE CITE THE FIGSHARE.COM R-SCRIPT: Bulla M, Stich E, Valcu M, and Kempenaers B. 2014. R-script from: Off-duty Behavior in a Biparentally Incubating, High-Arctic Breeding Shorebird: Effects of Sex, Time, and Weather. figshare.com<br>Available at: http://figshare.com/articles/R_script_from_Off_duty_Behavior_in_a_Biparentally_Incubating_High_Arctic_Breeding_Shorebird_Effects_of_Sex_Time_and_Weather/1093829 -------------------------------------------------------------------------------------------------------- Data are available as text files from: Bulla M, Stich E, Valcu M, and Kempenaers B. 2014. Data from: Off-duty Behavior in a Biparentally Incubating, High-Arctic Breeding Shorebird: Effects of Sex, Time, and Weather. figshare.com<br>Available at: http://figshare.com/articles/Data_from_Off_duty_Behavior_in_a_Biparentally_Incubating_High_Arctic_Breeding_Shorebird_Effects_of_Sex_Time_and_Weather/1093831
DOI: 10.6084/m9.figshare.1093834.v1
title: Detailed behaviour ABM of jaguar movements

description: Comprehensive code for entire ABM model. Programmed in Java using te Repast Simphony modelling software environment. Supplementary information for manuscript submitted to Ecological Modelling.
DOI: 10.6084/m9.figshare.1093997.v3
title: PubMed publication trends (1992 to 2014): evidence based medicine and clinical practice guidelines.

description: - Excel archive: Raw data, interactive figures, and PubMed search terms - Figure 1. Adjusted (Fig 1A) and unadjusted (Fig 1B) PubMed publication trends (01/01/1992 to 30/06/2014). - Figure 2. Adjusted PubMed publication trends (07/01/2008 to 29/06/2014) The numbers speak for themselves: evidence based medicine is broken and in crisis. Acknowledgments: I would like to acknowledge the following persons for their valuable help in data visualization and infographics: - Maria Fernanda Ramírez Professor of graphic design. Universidad del Valle. Cali, Colombia. - Lorena Franco. Graphic design student. Universidad del Valle. Cali, Colombia. <br>
DOI: 10.6084/m9.figshare.1093804.v1
title: Notoungulate faunas of north-western Argentina: new findings of early-diverging forms from the Eocene Geste Formation

description: Vertebrate-bearing deposits of the Geste Formation (Late Eocene) crop out in the Puna of Catamarca and Salta, north-western Argentina, and have yielded specimens of a variety of clades. Among these, mammals have particular importance since their record shows some taxonomic peculiarities when compared with that of adjacent units. Here we describe new material that includes Notoungulata of generalized morphology, two morphotypes of basal typotherians, and two interatheriid taxa (including <i>Antofagastia turneri</i> gen. et sp. nov.). These findings increase the variety of groups and provide new information about previously known taxa for this unit. Three phylogenetic analyses with different taxonomic contexts were performed. The first analysis includes the specimen referred to as ‘Typotheria indet. A’ in a data matrix of Paleogene notoungulates containing taxa traditionally referred as ‘Oldfieldthomasiidae’. The specimen is grouped together with three ‘oldfielthomasiids’ (<i>Maxschlosseria</i>, <i>Ultrapithecus</i> and <i>Dolichostylodon</i>) in the resulting tree. The second analysis involves specimens referred to as ‘Typotheria indet. B’, ‘archaeohyracids’, mesotheriids and hegetotheriids. The results show these fossils to be part of a basal polytomy of ‘early archaeohyracids’. Finally, a third analysis was conducted with Interatheriidae as the ingroup which recovered <i>Antofagastia turneri</i> at the base of a node including extra-Patagonian forms of non-interatheriine interatheriids plus <i>Eopachyrucos</i> and interatheriines. Although <i>Antofagastia</i>, <i>Punapithecus</i> and Chilean extra-Patagonian forms share some features, such as small size, they do not comprise a distinct clade. The notoungulate record of the Geste Formation shows some singularities in the context of north-western Argentinean Paleogene units, the presence of interatheriids and ‘archaeohyracids’ being the most striking of these. The differences exhibited can be partially explained by temporal factors, since recent isotopic data points to a Late Eocene age for this unit. Biogeographical isolation represents another possible explanation, because these levels appear to be deposited in an isolated geographical and geological context, suggesting intermontane basin deposition or local wedge-top basins.http://zoobank.org/urn:lsid:zoobank.org:pub:690E818B-D2CD-4E93-9C34-8305E8D7F847
DOI: 10.6084/m9.figshare.1093834.v2
title: Detailed behaviour ABM of jaguar movements

description: Comprehensive code for entire ABM model. Programmed in Java using te Repast Simphony modelling software environment. Supplementary information for manuscript submitted to Ecological Modelling.