cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28726466
title: ganesh grocery store

description: The ganesh Grocery Data dataset holds information of grocery products being sold through different supermarket outlets, including product characteristics, store information, and sales performance. It encompasses major fields such as Item Identifier, Item Type, Fat Content, Item Weight, and Visibility, along with store-specific information like Outlet Identifier, Location Type, Size, and Establishment Year. Also, it monitors sales revenue and product ratings, thus being useful for analyzing product performance, customer preferences, and store efficiency. This dataset can be applied to sales forecasting, inventory optimization, and market trend analysis.
DOI: 10.25345/c5cf9jk3h
title: MassIVE MSV000097519 - Omics Insights into the Effects of Highbush Blueberry and Cranberry Crop Agroecosystems on Honey Bee Health and Physiology
title: Honey bees (Apis mellifera) are essential pollinators in agricultural systems, particularly in fruit-producing agroecosystems such as highbush blueberry and cranberry. However, their health is increasingly compromised by multiple interacting stressors, including pesticide exposure, pathogen infections, and changing nutritional landscapes. To test the hypothesis that distinct agricultural ecosystems, with different combinations of agrochemical exposure, pathogen loads, and floral resources, elicit ecosystem specific, tissue level molecular responses in honey bees, we conducted an integrated multiomics analysis. We combined RNA sequencing, quantitative proteomics, and gut microbiome profiling across three key tissues: head, abdomen, and gut collected from bees in blueberry and cranberry agroecosystems over two field seasons. In parallel, we quantified pesticide residues and pathogen and parasite loads (e.g., Nosema spp., Varroa destructor, and several viruses). Notably, our weighted gene co-expression network analysis (WGCNA) revealed tissue specific coregulated protein modules with ecosystem associated patterns. Bees from blueberry agroecosystems exhibited elevated expression of modules in oxidative phosphorylation, and translation, while those from cranberry agroecosystems showed increased activity in immune pathways and endoplasmic reticulum associated protein processing, indicating potential as robust markers for ecosystem induced physiological adaptation. To further explore the molecular mechanisms underlying different ecosystems, we also conducted the integrative analysis of proteomics, transcriptomics and gut microbiome metagenomics. Gut microbiota composition also differed significantly, with key genera (e.g., Gilliamella, Snodgrassella, Bartonella) correlating with host metabolic and immune modules. These findings underscore the complex, environment-dependent impacts of agroecosystem conditions on bee health. Our study provides a systems level understanding of how combined pesticide, pathogen, and parasitic stressors, mediated by diet and microbiome, shape molecular phenotypes in honey bees, informing strategies for pollinator protection in managed landscapes.
DOI: 10.15468/dl.w2zrby
title: Occurrence Download

description: A dataset containing 26627 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Agaricales"
 ]
}

 The dataset includes 26627 records from 154 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002631-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wxpwf2
title: Occurrence Download

description: A dataset containing 4374 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Observation.org, Nature data from around the World",
 "Geometry POLYGON((-75.02467 10.89596,-73.08373 10.89596,-73.08373 11.67200,-75.02467 11.67200,-75.02467 10.89596))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4374 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002634-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y3spun
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Forcipomyia oligarthra Saunders, 1957",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002635-250402121839773/datasets/export for details.
DOI: 10.15468/dl.3w4r9v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nausibius sahlbergi Grouvelle, 1896",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002636-250402121839773/datasets/export for details.
DOI: 10.15468/dl.5hn7jw
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is United States of America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-88.15699 43.1809,-87.95228 43.1809,-87.95228 43.31862,-88.15699 43.31862,-88.15699 43.1809))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bombus Latreille, 1802"
 ]
}

 The dataset includes 91 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002639-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5v2rbm
title: Occurrence Download

description: A dataset containing 8332 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphonia concinna P.L.Sclater, 1855"
 ]
}

 The dataset includes 8332 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002637-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.35pgf4
title: Occurrence Download

description: A dataset containing 255 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Country is Russian Federation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Calidris melanotos (Vieillot, 1819)",
 "Year 2014-2024"
 ]
}

 The dataset includes 255 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002640-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15132381
title: Wild and domesticate mammals drove late-Holocene alpine plant diversity

description: The raw OBITools output data both the P6-loop (all reference libraries) and 16s datasets
DOI: 10.5281/zenodo.15132382
title: Wild and domesticate mammals drove late-Holocene alpine plant diversity

description: The raw OBITools output data both the P6-loop (all reference libraries) and 16s datasets
DOI: 10.15468/dl.27stne
title: Occurrence Download

description: A dataset containing 6913264 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "Geometry POLYGON((-81.63526 -2.07973,-77.14326 -2.07973,-77.14326 0.24326,-81.63526 0.24326,-81.63526 -2.07973))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 6913264 records from 898 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002612-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7tdu8r
title: Occurrence Download

description: A dataset containing 651241 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Country is one of (Russian Federation, Ireland, Greenland, United Kingdom of Great Britain and Northern Ireland, Iceland, Sweden, Norway, Finland, Estonia, Latvia, Lithuania, Poland, Denmark, Germany, Svalbard and Jan Mayen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Calidris alpina (Linnaeus, 1758)",
 "Year 2014-2024"
 ]
}

 The dataset includes 651241 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002615-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2kbjr6
title: CCDC 2363618: Experimental Crystal Structure Determination

description: Related Article: James E. Pearce, Jack Hodgson, Ana A. Folgueiras-Amador, Johanna A. Fish, Robert C. Carroll, Simon J. Coles, Philip J. Parsons, Richard C. D. Brown, David C. Harrowven|2025|Chem.Commun.|61|4042|doi:10.1039/D4CC06061J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l3484
title: CCDC 2386295: Experimental Crystal Structure Determination

description: Related Article: Awal Noor|2025|Polyhedron|273|117481|doi:10.1016/j.poly.2025.117481
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lbfft
title: CCDC 2393306: Experimental Crystal Structure Determination

description: Related Article: Brian M. Rotermund, Nicholas B. Beck, Hannah B. Wineinger, Joseph M. Sperling, Gregory P. Horne, Jacob P. Brannon, Rosalie Greer, Thomas E. Albrecht|2025|Inorg.Chem.|64|5341|doi:10.1021/acs.inorgchem.4c05386
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lflxk
title: CCDC 2396359: Experimental Crystal Structure Determination

description: Related Article: Abhay Pratap Singh, Jubaraj B. Baruah|2025|CrystEngComm|27|1701|doi:10.1039/D4CE01200C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lflyl
title: CCDC 2396360: Experimental Crystal Structure Determination

description: Related Article: Abhay Pratap Singh, Jubaraj B. Baruah|2025|CrystEngComm|27|1701|doi:10.1039/D4CE01200C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lky15
title: CCDC 2400517: Experimental Crystal Structure Determination

description: Related Article: Takeshi Nanjo, Yixuan Lin, Yusei Fujii, Yoshiji Takemoto|2025|Org.Lett.|27|2616|doi:10.1021/acs.orglett.5c00266
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lqh0v
title: CCDC 2404887: Experimental Crystal Structure Determination

description: Related Article: Dongjing Hong|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lr88x
title: CCDC 2405639: Experimental Crystal Structure Determination

description: Related Article: Kurumi Satake, Naoto Ootsuki, Kenji Higashiguchi, Kenji Matsuda|2025|J.Am.Chem.Soc.|147|9653|doi:10.1021/jacs.4c17757
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25345/c57p8tr9r
title: MassIVE MSV000097520 - Omics Insights into the Effects of Highbush Blueberry and Cranberry Crop Agroecosystems on Honey Bee Health and Physiology
title: Honey bees (Apis mellifera) are essential pollinators in agricultural systems, particularly in fruit-producing agroecosystems such as highbush blueberry and cranberry. However, their health is increasingly compromised by multiple interacting stressors, including pesticide exposure, pathogen infections, and changing nutritional landscapes. To test the hypothesis that distinct agricultural ecosystems, with different combinations of agrochemical exposure, pathogen loads, and floral resources, elicit ecosystem specific, tissue level molecular responses in honey bees, we conducted an integrated multiomics analysis. We combined RNA sequencing, quantitative proteomics, and gut microbiome profiling across three key tissues: head, abdomen, and gut collected from bees in blueberry and cranberry agroecosystems over two field seasons. In parallel, we quantified pesticide residues and pathogen and parasite loads (e.g., Nosema spp., Varroa destructor, and several viruses). Notably, our weighted gene co-expression network analysis (WGCNA) revealed tissue specific coregulated protein modules with ecosystem associated patterns. Bees from blueberry agroecosystems exhibited elevated expression of modules in oxidative phosphorylation, and translation, while those from cranberry agroecosystems showed increased activity in immune pathways and endoplasmic reticulum associated protein processing, indicating potential as robust markers for ecosystem induced physiological adaptation. To further explore the molecular mechanisms underlying different ecosystems, we also conducted the integrative analysis of proteomics, transcriptomics and gut microbiome metagenomics. Gut microbiota composition also differed significantly, with key genera (e.g., Gilliamella, Snodgrassella, Bartonella) correlating with host metabolic and immune modules. These findings underscore the complex, environment-dependent impacts of agroecosystem conditions on bee health. Our study provides a systems level understanding of how combined pesticide, pathogen, and parasitic stressors, mediated by diet and microbiome, shape molecular phenotypes in honey bees, informing strategies for pollinator protection in managed landscapes.
DOI: 10.5517/ccdc.csd.cc2lr89y
title: CCDC 2405640: Experimental Crystal Structure Determination

description: Related Article: Kurumi Satake, Naoto Ootsuki, Kenji Higashiguchi, Kenji Matsuda|2025|J.Am.Chem.Soc.|147|9653|doi:10.1021/jacs.4c17757
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lr8bz
title: CCDC 2405641: Experimental Crystal Structure Determination

description: Related Article: Kurumi Satake, Naoto Ootsuki, Kenji Higashiguchi, Kenji Matsuda|2025|J.Am.Chem.Soc.|147|9653|doi:10.1021/jacs.4c17757
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ls4r9
title: CCDC 2406491: Experimental Crystal Structure Determination

description: Related Article: Jie Wen, Mengmeng Yu, Houli Jiang, Yi Zhu, Danyang Zhang, Mingzhe Yang, Lingyi Kong, Jun Luo|2025|Bioorg.Chem.|158|108327|doi:10.1016/j.bioorg.2025.108327
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ls4tc
title: CCDC 2406493: Experimental Crystal Structure Determination

description: Related Article: Jie Wen, Mengmeng Yu, Houli Jiang, Yi Zhu, Danyang Zhang, Mingzhe Yang, Lingyi Kong, Jun Luo|2025|Bioorg.Chem.|158|108327|doi:10.1016/j.bioorg.2025.108327
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m430x
title: CCDC 2417008: Experimental Crystal Structure Determination

description: Related Article: Lukas Blank, Jungwon Kim, Constantin G. Daniliuc, Alissa Goetzinger, Marc-André Müller, Jan Schütz, Bettina Wuestenberg, Ryan Gilmour|2025|J.Am.Chem.Soc.|147|10023|doi:10.1021/jacs.5c01814
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m431y
title: CCDC 2417009: Experimental Crystal Structure Determination

description: Related Article: Lukas Blank, Jungwon Kim, Constantin G. Daniliuc, Alissa Goetzinger, Marc-André Müller, Jan Schütz, Bettina Wuestenberg, Ryan Gilmour|2025|J.Am.Chem.Soc.|147|10023|doi:10.1021/jacs.5c01814
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m4fs0
title: CCDC 2417342: Experimental Crystal Structure Determination

description: Related Article: Hui Rao, Hairui Jia, Zaozao Qiu, Zuowei Xie|2025|Dalton Trans.|54|4866|doi:10.1039/D5DT00382B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m4ft1
title: CCDC 2417343: Experimental Crystal Structure Determination

description: Related Article: Hui Rao, Hairui Jia, Zaozao Qiu, Zuowei Xie|2025|Dalton Trans.|54|4866|doi:10.1039/D5DT00382B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m4fv2
title: CCDC 2417344: Experimental Crystal Structure Determination

description: Related Article: Hui Rao, Hairui Jia, Zaozao Qiu, Zuowei Xie|2025|Dalton Trans.|54|4866|doi:10.1039/D5DT00382B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5ft2
title: CCDC 2418304: Experimental Crystal Structure Determination

description: Related Article: Jia-Ying Yu, Zhe-Kun Xu, Jia-Qi Gan, Yan Qin, Hui-Peng Lv, Zhong-Xia Wang|2025|Inorg.Chem.|64|5284|doi:10.1021/acs.inorgchem.5c00403
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.28726475
title: Cross-et-al-2025-NG_CodeS1_slabModel.zip

description: Code for producing the slab model presented in Cross et al. (2025, Nature Geoscience)
DOI: 10.15468/dl.h2m7p6
title: Occurrence Download

description: A dataset containing 319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Litopenaeus vannamei (Boone, 1931)"
 ]
}

 The dataset includes 319 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002645-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5883/ds-canref22
title: Mikko Pentinsaari, Valerie Levesque-Beaudin, Gergin Blagoev, Jeremy DeWaard, Chris Ho, Dirk Steinke, Ramya Manjunath, Sujeevan Ratnasingham, Paul D.N. Hebert

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.