cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/whyd9z
title: Three new troglobitic Coarazuphium (Coleoptera, Carabidae, Zuphiini) species from a Brazilian hotspot of cave beetles: exploring how the environmental attributes of caves drive ground-beetle niches

description: This dataset contains the digitized treatments in Plazi based on the original journal article Pellegrini, Thais Giovannini, Ferreira, Rodrigo Lopes, Zampaulo, Robson de Almeida, Vieira, Leticia (2022): Three new troglobitic Coarazuphium (Coleoptera, Carabidae, Zuphiini) species from a Brazilian hotspot of cave beetles: exploring how the environmental attributes of caves drive ground-beetle niches. Subterranean Biology 43: 97-126, DOI: http://dx.doi.org/10.3897/subtbiol.43.73185, URL: http://dx.doi.org/10.3897/subtbiol.43.73185
DOI: 10.15468/maut54
title: High liverwort diversity in the tropical Andes as evidenced by the discovery of three new species of Radula (Radulaceae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Oliveira-Da-Silva, Fúvio R., Gradstein, S. Robbert (2024): High liverwort diversity in the tropical Andes as evidenced by the discovery of three new species of Radula (Radulaceae). Phytotaxa 653 (1): 91-99, DOI: 10.11646/phytotaxa.653.1.7, URL: http://dx.doi.org/10.11646/phytotaxa.653.1.7AbstractWe describe three new species of Radula subg. Volutoradula from above 3000 m in the tropical Andes: R. ilkiuborgesiae from Colombia (Dept. Santander), and R. longicarinata and R. magna from Bolivia (Dept. La Paz). The new species stand out by the unusual shape of their lobules. Full descriptions, illustrations as well as comments on the morphology, taxonomy, ecology and distribution of the new species are provided. The discovery of the new species adds three further endemic taxa to the rich bryophyte flora of the tropical Andes, the richest area for Radulaceae in the Neotropics.
DOI: 10.6084/m9.figshare.26694666
title: Additional file 3 of Screening and functional analysis of StMYB transcription factors in pigmented potato under low-temperature treatment

description: Additional file 3.
DOI: 10.6084/m9.figshare.26694666.v1
title: Additional file 3 of Screening and functional analysis of StMYB transcription factors in pigmented potato under low-temperature treatment

description: Additional file 3.
DOI: 10.15468/dl.g4nfs6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.973622 -32.807164, 148.973622 -32.818393, 148.975868 -32.818393, 148.975868 -32.813901, 148.987097 -32.813901, 148.987097 -32.811655, 148.975868 -32.811655, 148.975868 -32.807164, 148.973622 -32.807164))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067668-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26573791.v1
title: Additional file 2 of Inflammation and neuronal gene expression changes differ in early versus late chronic traumatic encephalopathy brain

description: Additional file 2. Table S2. qPCR expression values for validation genes. Delta CT values for genes from qPCR analysis for genes examined for validation of mRNASeq findings.
DOI: 10.6084/m9.figshare.26573794.v1
title: Additional file 3 of Inflammation and neuronal gene expression changes differ in early versus late chronic traumatic encephalopathy brain

description: Additional file 3. Table S3. Overlap of mRNASeq and qPCR genes for DE models. Summary table of genes significant that overlap in mRNASeq or qPCR for each DE modelconsidered in study.
DOI: 10.6084/m9.figshare.26694711.v1
title: Additional file 2 of Long-term push–pull cropping system shifts soil and maize-root microbiome diversity paving way to resilient farming system

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26694711
title: Additional file 2 of Long-term push–pull cropping system shifts soil and maize-root microbiome diversity paving way to resilient farming system

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26694714
title: Additional file 3 of Long-term push–pull cropping system shifts soil and maize-root microbiome diversity paving way to resilient farming system

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.26694714.v1
title: Additional file 3 of Long-term push–pull cropping system shifts soil and maize-root microbiome diversity paving way to resilient farming system

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.26694717
title: Additional file 4 of Long-term push–pull cropping system shifts soil and maize-root microbiome diversity paving way to resilient farming system

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.26694717.v1
title: Additional file 4 of Long-term push–pull cropping system shifts soil and maize-root microbiome diversity paving way to resilient farming system

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.26694732
title: Additional file 2 of Corpus luteum presence in the bovine ovary increase intrafollicular progesterone concentration: consequences in follicular cells gene expression and follicular fluid small extracellular vesicles miRNA contents

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26694732.v1
title: Additional file 2 of Corpus luteum presence in the bovine ovary increase intrafollicular progesterone concentration: consequences in follicular cells gene expression and follicular fluid small extracellular vesicles miRNA contents

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26694738
title: Additional file 4 of Corpus luteum presence in the bovine ovary increase intrafollicular progesterone concentration: consequences in follicular cells gene expression and follicular fluid small extracellular vesicles miRNA contents

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.26694738.v1
title: Additional file 4 of Corpus luteum presence in the bovine ovary increase intrafollicular progesterone concentration: consequences in follicular cells gene expression and follicular fluid small extracellular vesicles miRNA contents

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.26694744
title: Additional file 1 of Molecular and clinicopathologic characteristics of CNS embryonal tumors with BRD4::LEUTX fusion

description: Additional file 1: Table S1. Main histopathologic findings in tumors with BRD4::LEUTX fusion. Table S2. Main immunohistochemical findings in tumors with BRD4::LEUTX fusion.
DOI: 10.6084/m9.figshare.26694744.v1
title: Additional file 1 of Molecular and clinicopathologic characteristics of CNS embryonal tumors with BRD4::LEUTX fusion

description: Additional file 1: Table S1. Main histopathologic findings in tumors with BRD4::LEUTX fusion. Table S2. Main immunohistochemical findings in tumors with BRD4::LEUTX fusion.
DOI: 10.15468/dl.s2abc5
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.29_1",
 "TaxonKey is Garrulax davidi (Swinhoe, 1868)"
 ]
}

 The dataset includes 56 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067669-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b4fue7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.481792 -32.80941, 148.481792 -32.813901, 148.484038 -32.813901, 148.484038 -32.80941, 148.481792 -32.80941)), ((148.484038 -32.813901, 148.484038 -32.818393, 148.488529 -32.818393, 148.488529 -32.816147, 148.486283 -32.816147, 148.486283 -32.813901, 148.484038 -32.813901)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067670-240626123714530/datasets/export for details.
DOI: 10.15468/dl.cvqp2e
title: Occurrence Download

description: A dataset containing 1441 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (CHN.31.1_1, CHN.31.3_1, CHN.31.2_1, CHN.31.8_1, CHN.31.6_1)",
 "TaxonKey is Anas crecca Linnaeus, 1758"
 ]
}

 The dataset includes 1441 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067671-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfpeue
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Duttaphrynus melanostictus (Schneider, 1799))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900",
 "BasisOfRecord is one of (Specimen)",
 "Country is one of (Papua New Guinea)",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than or equal to 20000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067672-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26694873
title: Additional file 1 of A novel intronic TCOF1 pathogenic variant in a Chinese family with Treacher Collins syndrome

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.26694873.v1
title: Additional file 1 of A novel intronic TCOF1 pathogenic variant in a Chinese family with Treacher Collins syndrome

description: Supplementary Material 1.
DOI: 10.15468/dl.23q9k2
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Myanmar",
 "TaxonKey is one of (Coreopsis lanceolata L., Coreopsis grandiflora Hogg ex Sweet, Coreopsis tinctoria Nutt., Bidens odorata Coville, Bidens alba (L.) DC., Bidens pilosa L., Bidens bipinnata L., Bidens subalternans DC., Bidens frondosa L., Bidens vulgata Greene, Cosmos sulphureus Cav., Cosmos bipinnatus Cav., Galinsoga quadriradiata Ruiz & Pav., Galinsoga parviflora Cav., Acmella uliginosa (Sw.) Cass., Acmella ciliata (Kunth) Cass., Acmella oleracea (L.) R.K.Jansen, Acmella radicans var. debilis (Kunth) R.K.Jansen, Acmella radicans (Jacq.) R.K.Jansen, Zinnia peruviana (L.) L., Silphium perfoliatum L., Smallanthus uvedalia (L.) Mack. ex Small, Tridax procumbens L., Gaillardia pulchella Foug., Pectis prostrata Cav., Tagetes minuta L., Tagetes erecta L., Porophyllum ruderale (Jacq.) Cass., Helenium autumnale L., Helenium flexuosum Raf., Flaveria bidentis (L.) Kuntze, Cyclachaena xanthiifolia (Nutt.) Fresen., Parthenium hysterophorus L., Ambrosia artemisiifolia L., Ambrosia psilostachya DC., Ambrosia trifida L., Xanthium strumarium L., Xanthium chinense Mill., Xanthium spinosum L., Acanthospermum hispidum DC., Pyrethrum partheniifolium Willd., Leucanthemum vulgare Lam., Soliva sessilis Ruiz & Pav., Soliva anthemifolia R.Br., Cotula australis (Sieber ex Spreng.) Hook.fil., Senecio vulgaris L., Erechtites valerianifolius (Wolf ex Rchb.) DC., Erechtites hieraciifolius (L.) Raf. ex DC., Crassocephalum rubens (Juss. ex Jacq.) S.Moore, Crassocephalum crepidioides (Benth.) S.Moore)"
 ]
}

 The dataset includes 92 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067673-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26612966.v1
title: Additional file 1 of Phylogenetic placement of Ceratophyllum submersum based on a complete plastome sequence derived from nanopore long read sequencing data

description: Additional file 1. FASTQ stats of the Ceratophyllum submersum plastome reads. The stats were calculated with the help of the script FASTQ_stats3.py (https://github.com/bpucker/GenomeAssembly).
DOI: 10.15468/dl.78434r
title: Occurrence Download

description: A dataset containing 992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Mammillaria uncinata Zucc. ex Pfeiff."
 ]
}

 The dataset includes 992 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067675-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m63uap
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.717601 -32.80941, 148.717601 -32.811655, 148.719846 -32.811655, 148.719846 -32.80941, 148.717601 -32.80941))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067674-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26573857
title: Additional file 1 of Effect of environmental variance-based resilience selection on the gut metabolome of rabbits

description: Additional file 1. Full pipeline with all the metabolomic analyses.
DOI: 10.6084/m9.figshare.26573860.v1
title: Additional file 2 of Effect of environmental variance-based resilience selection on the gut metabolome of rabbits

description: Additional file 2: Table S1. Results of the Bayesian statistical analysis. The file includes (from left to right) the metabolite ID, posterior mean of the differences among the resilient and non-resilient rabbit populations (meanDiff), the probability of the difference being higher (if the difference is positive) or lower (if negative) than 0 (P0), the highest posterior interval density of 95% (HPD95), the chemical name of the metabolites and the general and specific pathways in which they are involved, the posterior error probability (PEP), the cumulative PEP, the metabolites identified by the Bayesian analysis (Bayes), the metabolites identified by the PLS-DA (PLS), and the biological origin determined for each metabolite.
DOI: 10.6084/m9.figshare.26573857.v1
title: Additional file 1 of Effect of environmental variance-based resilience selection on the gut metabolome of rabbits

description: Additional file 1. Full pipeline with all the metabolomic analyses.
DOI: 10.6084/m9.figshare.26612966
title: Additional file 1 of Phylogenetic placement of Ceratophyllum submersum based on a complete plastome sequence derived from nanopore long read sequencing data

description: Additional file 1. FASTQ stats of the Ceratophyllum submersum plastome reads. The stats were calculated with the help of the script FASTQ_stats3.py (https://github.com/bpucker/GenomeAssembly).
DOI: 10.6084/m9.figshare.26612972.v1
title: Additional file 3 of Phylogenetic placement of Ceratophyllum submersum based on a complete plastome sequence derived from nanopore long read sequencing data

description: Additional file 3. List of references of the reference plastomes. The data was extracted by PAPAplastomes and originates from the RefSeq database.
DOI: 10.6084/m9.figshare.26694966
title: Additional file 1 of A prospective open-label study to evaluate the effectiveness of intravenous ketamine as an adjunct in treating severe depression

description: Supplementary material 1.
DOI: 10.6084/m9.figshare.26694966.v1
title: Additional file 1 of A prospective open-label study to evaluate the effectiveness of intravenous ketamine as an adjunct in treating severe depression

description: Supplementary material 1.
DOI: 10.6084/m9.figshare.26694969
title: Additional file 1 of Accelerating targeted mosquito control efforts through mobile West Nile virus detection

description: Additional file 1: Table S1. Mosquito trapping data. Table S2. NGS sequencing genome coverage plot and raw data for West Nile virus. Table S3. NGS sequencing genome coverage plot and raw data for Bagaza virus.
DOI: 10.6084/m9.figshare.26694969.v1
title: Additional file 1 of Accelerating targeted mosquito control efforts through mobile West Nile virus detection

description: Additional file 1: Table S1. Mosquito trapping data. Table S2. NGS sequencing genome coverage plot and raw data for West Nile virus. Table S3. NGS sequencing genome coverage plot and raw data for Bagaza virus.
DOI: 10.6084/m9.figshare.26694993
title: Additional file 2 of The plant-like protein phosphatase PPKL regulates parasite replication and morphology in Toxoplasma gondii

description: Additional file 2: Table S4. Statistical analysis of mass spectrometry datasets identified in the purified samples from the parental line and the TurboID-PPKL line using streptavidin beads. The fold changes and P-values were calculated by comparing the peptide numbers of the TurboID-PPKL (PPKL_1/2) with those of the parental line (RH_1/2). Note that the peptide number with zero in the RH was considered as 1 for the analysis. The results were used to plot Figure S3D, and the hits with P&lt;0.05 were used for protein interaction analysis by STRING (Figure S3E) and Gene Ontology analysis in ToxoDB (Fig S3G).
DOI: 10.6084/m9.figshare.26694993.v1
title: Additional file 2 of The plant-like protein phosphatase PPKL regulates parasite replication and morphology in Toxoplasma gondii

description: Additional file 2: Table S4. Statistical analysis of mass spectrometry datasets identified in the purified samples from the parental line and the TurboID-PPKL line using streptavidin beads. The fold changes and P-values were calculated by comparing the peptide numbers of the TurboID-PPKL (PPKL_1/2) with those of the parental line (RH_1/2). Note that the peptide number with zero in the RH was considered as 1 for the analysis. The results were used to plot Figure S3D, and the hits with P&lt;0.05 were used for protein interaction analysis by STRING (Figure S3E) and Gene Ontology analysis in ToxoDB (Fig S3G).
DOI: 10.15468/dl.w37pyy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.677796 -32.811655, 147.677796 -32.813901, 147.680041 -32.813901, 147.680041 -32.811655, 147.677796 -32.811655))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067676-240626123714530/datasets/export for details.
DOI: 10.15468/dl.pmb5rd
title: Occurrence Download

description: A dataset containing 673 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "TaxonKey is Pithecopus azureus (Cope, 1862)"
 ]
}

 The dataset includes 673 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067677-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v9u5h6
title: Occurrence Download

description: A dataset containing 232 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Census of waterbird in Benin Flyway"
 ]
}

 The dataset includes 232 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067678-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.88rhn3
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Duttaphrynus melanostictus (Schneider, 1799))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900",
 "BasisOfRecord is one of (Specimen)",
 "Country is one of (Chinese Taipei)",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than or equal to 20000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 121 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067679-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26573824
title: Additional file 2 of Virome of wild rats (Rattus norvegicus) captured far from pig farms in Jiangsu province of China reveals novel porcine circovirus type 2d (PCV2d) sequences

description: Additional file 2: Data on detected viral genomic sequences
DOI: 10.15468/dl.39kx4u
title: Occurrence Download

description: A dataset containing 627 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.29_1",
 "TaxonKey is Trochalopteron henrici Oustalet, 1892"
 ]
}

 The dataset includes 627 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067681-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26612972
title: Additional file 3 of Phylogenetic placement of Ceratophyllum submersum based on a complete plastome sequence derived from nanopore long read sequencing data

description: Additional file 3. List of references of the reference plastomes. The data was extracted by PAPAplastomes and originates from the RefSeq database.
DOI: 10.6084/m9.figshare.26573824.v1
title: Additional file 2 of Virome of wild rats (Rattus norvegicus) captured far from pig farms in Jiangsu province of China reveals novel porcine circovirus type 2d (PCV2d) sequences

description: Additional file 2: Data on detected viral genomic sequences
DOI: 10.15468/dl.3m9pff
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-12.71918 30.51543,14.71918 30.51543,14.71918 41.48457,-12.71918 41.48457,-12.71918 30.51543))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salamandra algira Bedriaga, 1883"
 ]
}

 The dataset includes 88 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016687-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9916907
title: Mahanagar Yatayat Transport Dataset
DOI: 10.15468/dl.n5nqde
title: Occurrence Download

description: A dataset listing the 6 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ateles hybridus I.Geoffroy Saint-Hilaire, 1829"
 ]
}

 The dataset's 6 records were derived from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016683-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.adnw4m
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ternstroemia glomerata Proctor"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016689-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.