cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25824/redu/9ainy6
title: 3- Spray system characterization for evaluating particle size enlargement in fluidized bed agglomeration.tab

description: :unav
DOI: 10.25824/redu/rtonl4
title: Spray system characterization for evaluating particle size enlargement in fluidized bed agglomeration

description: Essa base de dados corresponde aos dados de caracterização das soluções de maltodextrina (densidade, ângulo de contato, tensão superficial e reologia), tamanho e velocidade de gotas, cinética de crescimento de partículas e classe de tamanhos.
DOI: 10.15472/1ckqdu
title: Lista de especies de Plantas epifitas vasculares de la Reserva Natural La Planada - Resguardo Indígena Awá Pialapí Pueblo Viejo, Ricaurte, departamento de Nariño, Colombia

description: Este recurso presenta las especies de plantas epífitas vasculares encontrados entre febrero de 2021 y febrero de 2022 en la Reserva Natural La Planada - Resguardo Indígena Awá Pialapí Pueblo Viejo, Ricaurte, Nariño, Colombia, y las especies reportadas en diferentes fuentes bibliográficas y colecciones biológicas encontradas durante el levantamiento de información del proyecto "Diseño y prueba de una estrategia de innovación social de turismo de naturaleza científico en territorio ancestral Awá del departamento de Nariño". Actualmente se reportan 521 especies pertenecientes a las familias Araceae, Bromeliaceae, Gesneriaceae y Orchidaceae, las cuales se distribuyen en 86 géneros. Orchidaceae es la familia más destacada con 60 géneros, seguido por Araceae con 10 géneros, Gesneriaceae y Bromeliaceae con 8 géneros respectivamente.
description: Se resalta la presencia de en este reporte de especies en estado de amenaza, a saber, Cyrtochilum williamsianum, Epidendrum carchiense, Epidendrum maldonadoense, Lepanthes satírica, Lepanthes barbelifera, Pleurothallis eidos, Pleurothallis gargantua, Pleurothallis troglodytes, en estado Vulnerable (VU), Pleurothallis flaveola, Sobralia luerorum, Stelis anolis en estado Casi Amenazado (NT), y Dracula vespertilio, Tillandsia polystachia, Vriesea pereziana en estado de Preocupación menor (LC). Indicando la importancia de la RNLP-RPPV como sitio estratégico de conservación, al albergar las poblaciones de estas especies amenazadas.
DOI: 10.6073/pasta/ee02a0c90134592acf8c806ee8dad99d
title: Does the River Continuum Concept apply on a tropical island? Longitudinal variation in a Puerto Rican stream

description: We examined whether a tropical stream in Puerto Rico matched predictions of the River Continuum Concept (RCC) for macroinvertebrate functional feeding groups (FFGs). Sampling sites for macroinvertebrates, basal resources, and fishes ranged from headwaters to within 2.5 km of the fourth-order estuary. In a comparison to a model temperate system where RCC predictions generally held, we used catchment area as a measure of stream size in order to examine truncated RCC predictions (i.e., cut off to correspond to the largest stream size sampled in Puerto Rico). Despite dominance of generalist freshwater shrimps, which use more than one feeding mode, RCC predictions held for scrapers, shredders, and predators. Collector-filterers showed a trend opposite that predicted by the RCC, but patterns in basal resources suggest that this is consistent with the central RCC theme: longitudinal distributions of FFGs follow longitudinal patterns in basal resources. Alternatively, the filterer pattern may be explained by fish predation affecting distributions of filter-feeding shrimp. Our results indicate that the RCC generally applies to running waters on tropical islands. However, additional theoretical and field studies across a broad array of stream types should examine whether the RCC needs to be refined to reflect the potential influence of top-down trophic controls on FFG distributions.
DOI: 10.15472/htyg0m
title: Lista de especies de Reptiles de la Reserva Natural La Planada - Resguardo Indígena Awá Pialapí Pueblo Viejo, Ricaurte, departamento de Nariño, Colombia

description: Este recurso presenta las especies de reptiles encontrados entre febrero de 2021 y febrero de 2022 en la Reserva Natural La Planada - Resguardo Indígena Awá Pialapí Pueblo Viejo, Ricaurte, Nariño, Colombia, Ricaurte, Nariño, Colombia y las especies reportadas en diferentes fuentes bibliográficas y colecciones biológicas encontradas durante el levantamiento de información del proyecto "Diseño y prueba de una estrategia de innovación social de turismo de naturaleza científico en territorio ancestral Awá del departamento de Nariño". Actualmente, se reportan 25 especies, 9 familias y 19 géneros. De las especies encontradas, 20 están catalogadas en alguna categoría de amenaza según la resolución 1912 de 2017 del Ministerio de Ambiente y Desarrollo Sostenible.
DOI: 10.6073/pasta/a236435211357ec2349bf580433b7045
title: Neritina snails hierarchical distribution

description: This data set includes N. virginea densities and sizes relative to streambed substrate type, water depth, and habitat type in a low land reach in RÃƒÂ­o Mameyes near PR Route 3 bridge, and presence and inland extent of distribution of in 32 coastal rivers around the island. Hydrologic and water chemistry variables are reported as predictors of snail distribution at regional and stream-network scales. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.15472/ok0fgf
title: Lista de especies de Anfibios de la Reserva Natural La Planada - Resguardo Indígena Awá Pialapí Pueblo Viejo, Ricaurte, departamento de Nariño, Colombia

description: Este recurso presenta las especies de anfibios encontrados entre febrero de 2021 y febrero de 2022 en la Reserva Natural La Planada - Resguardo Indígena Awá Pialapí Pueblo Viejo, Ricaurte, Nariño, Colombia, Ricaurte, Nariño, Colombia. Actualmente, se reportan 57 especies, 2 de estas determinadas hasta género, pertenecientes a 3 órdenes, 8 familias y 18 géneros. De las especies encontradas, 4 están catalogadas en peligro crítico (CR), 7 en peligro (EN) y 17 vulnerables (VU) según la Lista Roja de Especies Amenazadas de la UICN, 4 especies se encuentran dentro del apéndice II de La Convención sobre el Comercio Internacional de Especies Amenazadas de Fauna y Flora Silvestres (CITES). Y 9 son especies endémicas de Colombia.
DOI: 10.6073/pasta/53ffac83d5b5f2f3790b637df1d1de2c
title: Neritina snails upstream migrations at the intersection of Rio Mameyes with road PR Route 3 (bridge 1771)

description: This data set includes N. virginea densities and sizes from two channels in lower Rio Mameyes under PR Route 3 bridge during the upstream migration season Aug-Dec 2000. Microhabitat use (near-bed water velocities and depth) within both channels is also included. Massive migrations in long trails occurring on the sloped concrete embankment of the main channel were also documented during 99 weeks. Individual size from migratory aggregations was measured during selected dates. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.48324/dandi.000711/0.231121.1730
title: Allen Institute - Visual Behavior - Optical Physiology

description: The Visual Behavior Ophys dataset was generated using in vivo 2-photon calcium imaging (also called optical physiology, or “ophys”) to measure the activity of genetically identified neurons in the visual cortex of mice performing a go/no-go visual change detection task. Population of neurons were recorded over multiple days with varying sensory and behavioral contexts, including familiar and novel stimuli, and passive exposure sessions. This dataset can be used to evaluate the influence of experience, expectation, and task engagement on neural coding and dynamics in excitatory, Vip inhibitory, and Sst inhibitory cell populations. 

The full ophys dataset includes neural and behavioral measurements from 107 well-trained mice during 703 in vivo 2-photon imaging sessions from 326 unique fields of view, resulting in a total of 50,476 cortical neurons recorded. The full behavioral training history of all imaged mice is also provided as part of the dataset, allowing investigation into task learning, behavioral strategy, and inter-animal variability. There are a total of 4,782 behavior sessions available for analysis.

Full documentation of the Visual Behavior Ophys dataset and tutorials can be found here: https://allensdk.readthedocs.io/en/latest/visual_behavior_optical_physiology.html

The recommended route for interacting with these data is through the AllenSDK (https://github.com/AllenInstitute/AllenSDK/) which provides methods for downloading and processing data. Documentation of the AllenSDK can be found here: https://allensdk.readthedocs.io/en/latest/. 

There are several metadata summary tables that are available as "related resources" associated with this DANDI-set. You can also use the AllenSDK to download these tables. See this notebook (https://allensdk.readthedocs.io/en/latest/_static/examples/nb/visual_behavior_ophys_data_access.html) for information on downloading the metadata and the associated NWB files.

Publicly available pre-prints using this dataset include: 

Stimulus novelty uncovers coding diversity in visual cortical circuits
https://doi.org/10.1101/2023.02.14.528085 

Behavioral strategy shapes activation of the Vip-Sst disinhibitory circuit in visual cortex
https://doi.org/10.1101/2023.04.28.538575 

Familiarity modulated synapses model visual cortical circuit novelty responses
https://doi.org/10.1101/2023.08.16.553635
DOI: 10.5281/zenodo.10182356
title: D-PLACE dataset derived from Jenkins et al. 2013 'Global patterns of terrestrial vertebrate diversity and conservation'

description: Cite the source of the dataset as:




Jenkins CN, Pimm SL, Joppa LN. Global patterns of terrestrial vertebrate diversity and conservation. Proc Natl Acad Sci. 2013;110: E2602–E2610.
DOI: 10.5281/zenodo.10182361
title: D-PLACE dataset derived from Kreft and Jetz 2007 'Global patterns and determinants of vascular plant diversity'

description: Cite the source of the dataset as:




Kreft H, Jetz W. Global patterns and determinants of vascular plant diversity. Proc Natl Acad Sci. 2007;104: 5925–5930.
DOI: 10.6073/pasta/d064ba5ac0aac9c106bfb8f72ba98688
title: Canopy Trimming Experiment (CTE) plant seedling measurements

description: Seedlings were measured before and after treatments to determine how alterations in canopy openness and detritus affect seedling densities and life histories (growth, mortality, recruitment). It was predicted that plots experiencing canopy openness with detritus removed would have the quickest increase in seedlings (recruitment and growth), especially of early successional (light demanding) species, such as Cecropia. Seedlings in plots that received no canopy manipulation but had detritus deposited is predicted to have near-total mortality initially (low light and high physical inhibition due to detritus). Treatment plots experiencing both canopy manipulation and addition of detritus would initially experience near-total mortality, with some light demanding seedlings establishing and growing through detritus with time. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.48328/tudatalib-1262
title: Supplementary material: Gravure printing with a shear rate dependent ink

description: This dataset contains supplementary data for the following paper: <br> <br> Gravure printing with a shear rate dependent ink. <br> Pauline Rothmann-Brumm, Philipp Brockmann, Ilia V. Roisman, Jeanette Hussong, Edgar Dörsam, Hans Martin Sauer.<br> Flow: Applications of Fluid Mechanics, 2023. <br> <br> With the content of this dataset, diagrams from the publication can be recreated.
DOI: 10.3886/e195293
title: The Role of Minoritized Student Representation in Promoting Achievement and Equity within College STEM Courses

description: In the context of continued equity gaps in student success within and beyond STEM, this paper explored the extent to which the representation of underrepresented racial minority (URM) and first-generation college students predict grades in postsecondary STEM courses. The analyses examined 87,027 grades received by 11,868 STEM-interested students within 8,468 STEM courses at 20 institutions. Cross-classified multilevel models and student fixed effect analyses of these data both support the same conclusion: the proportion of URM and first-generation students within a class is positively associated with STEM grades among all students, and these relationships are stronger among students who are members of the minoritized group. Thus, promoting the representation of students with minoritized identities in STEM courses may lead to greater equity in college outcomes.
DOI: 10.3886/e195293v1
title: The Role of Minoritized Student Representation in Promoting Achievement and Equity within College STEM Courses

description: In the context of continued equity gaps in student success within and beyond STEM, this paper explored the extent to which the representation of underrepresented racial minority (URM) and first-generation college students predict grades in postsecondary STEM courses. The analyses examined 87,027 grades received by 11,868 STEM-interested students within 8,468 STEM courses at 20 institutions. Cross-classified multilevel models and student fixed effect analyses of these data both support the same conclusion: the proportion of URM and first-generation students within a class is positively associated with STEM grades among all students, and these relationships are stronger among students who are members of the minoritized group. Thus, promoting the representation of students with minoritized identities in STEM courses may lead to greater equity in college outcomes.
DOI: 10.6073/pasta/e45cea0c0a54940a3b700353e249bb77
title: Canopy Trimming Experiment (CTE) plants greater than 1 centimeter diameter at breast height (DBH)

description: Plant diameters and growth measurements were taken both before and after treatments to determine how alterations in canopy openness and detritus affect measures of growth, mortality, and production. Both types of trimmed plots are predicted to have relatively quick evidence of re-sprouting (1-3 months; based on Hurricane Hugo studies), especially palms. Because essentially complete defoliation to the canopy took place in the trim plots, the large stems that were trimmed should experience delayed growth and higher mortality than those in non-trimmed plots. The understory vegetation, or otherwise those that were not trimmed (i.e., stems &lt;10cm at dbh) should experience increased growth in both trim plots as a result of increased light. Some nutrient immobilization may occur in the detritus addition plots, but this is predicted to affect belowground processes most. Little influence on aboveground processes from detritus addition might occur and cause some stunted growth rates of stems. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.5281/zenodo.10182347
title: Survey Results - User Accuracy Effects on Algorithmic Accuracy

description: The survey was hosted on Qualtrics and participants recruited via Cloud Research. Participants are US-only. The data includes those who did not finish. No PII data was collected. 
The survey included a deception scenario for a mortgage application followed by a battery of questions to assess ratings of the algorithm, assess participant honesty, and assess algorithmic awareness.
DOI: 10.5281/zenodo.10182346
title: Survey Results - User Accuracy Effects on Algorithmic Accuracy

description: The survey was hosted on Qualtrics and participants recruited via Cloud Research. Participants are US-only. The data includes those who did not finish. No PII data was collected. 
The survey included a deception scenario for a mortgage application followed by a battery of questions to assess ratings of the algorithm, assess participant honesty, and assess algorithmic awareness.
DOI: 10.6073/pasta/a6bc3239f9c50ea331510c64db16e2e5
title: Ferns surveys of individuals of terrestrial ferns in Canopy Trimming Experiment (CTE) plots document changes in species richness and abundance over time in response to canopy opening and/or debris deposition

description: Whole plot surveys of Canopy Triming Experiment (CTE) plots were done to detect changes in the number of terrestrial fern species and individuals in response to canopy opening and debris deposition.Â Surveys were conducted annually prior to and after treatments.Â A count of all terrestrial ferns, identified to species on the CTE plots was recorded for each subplot in January during CTE1 (2002-2010) and in the fall during CTE2 (2014-present).Â The surveys document losses of individuals of shade tolerant fern species and the appearance of open canopy ferns such as the tree fern Cyathea arborea. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.6073/pasta/7b5e3c527046f4b79af3c85c9818255b
title: Daily Meteorological data from East Peak, Sabana the Luquillo Experimental Forest

description: This data publication contains daily means from laser ceilometer data from Sabana and the mountain top station of East Peak, additional data for ozone data from Bisley, and meteorological data collected from Bisley are available from the USDA Forest Service Data Archive at https://doi.org/10.2737/RDS-2022-0050 All sites are located in the Luquillo Experimental Forest (El Yunque National Forest) in Puerto Rico. Atmospheric data include: mean cloud observed frequency, mean lowest height cloud (cloud base), mean daytime mixing layer height observed frequency, mean lowest mixing layer height from hours 7am and 7pm only, and mean daytime mixing layer height collected from February 2013 through April 2021. Also included is mean ozone amount collected from April 2008 through early April 2021. The cloud and mixing layer frequency and low values were calculated using the Automated Surface Observing System (ASOS) method employed at airports in the area. Weather data include high elevation East Peak mean northeast wind speed (wind rose quartiles 45° to 90°), mean southeast wind speed (wind rose quartiles 90° to 135°), and mean total wind speed measured from October 2009 through 2020 (and a few months in 2021). Additional weather data collected from January 2002 through mid October 2020 include mid elevation Bisley mean precipitation, mean relative humidity, and mean temperature. A subset of these data are here: https://doi.org/10.2737/RDS-2022-0050 please use this DOI when citing this dataset. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.6084/m9.figshare.24600324
title: Discrete choice model data regarding preferences of teachers about presence of animals in the classroom

description: Discrete choice model data regarding preferences of teachers about presence of animals in the classroom
DOI: 10.6084/m9.figshare.24600324.v1
title: Discrete choice model data regarding preferences of teachers about presence of animals in the classroom

description: Discrete choice model data regarding preferences of teachers about presence of animals in the classroom
DOI: 10.34683/sr43
title: StoneRounds Case: SR43
title: SECORD

description: StoneRounds Case SR43 was diagnosed with SECORD likely caused by mutations in the gene: RDH12.
DOI: 10.6084/m9.figshare.24599616.v1
title: Stout et al 2023 - Using synchronized brain rhythms to bias memory guided choice - eLife

description: Hello! :)These are the source data, which includes LFPs and behavioral data, for the eLife paper titled "Using synchronized brain rhythms to bias memory-guided decisions".These data are accompanied by code to reproduce all figures and statistics in the paper (GriffinLabCode/Manuscript Code/Published/Stout et al 2023 - Using synchronized brain rhythms to bias memory guided decisions/SCRIPT_sourceFigs.m at main · JohnStout/GriffinLabCode · GitHub)Please note that you will likely need the Griffin Lab pipeline to make use of some helper functions (GitHub - JohnStout/GriffinLabCode: Code used for processing and analyzing data from Amy Griffins laboratory at the University of Delaware)The instructions for using this pipeline are in the "1) READ ME.txt" file.It is important to note that some of the data used for this paper are from Hallock et al., 2016 (Ventral Midline Thalamus Is Critical for Hippocampal–Prefrontal Synchrony and Spatial Working Memory | Journal of Neuroscience (jneurosci.org)) and Stout and Griffin 2020 (Frontiers | Representations of On-Going Behavior and Future Actions During a Spatial Working Memory Task by a High Firing-Rate Population of Medial Prefrontal Cortex Neurons (frontiersin.org)). Contact: John Stout, john.j.stout.jr@gmail.com
DOI: 10.6084/m9.figshare.24171447
title: Supplementary Material

description: Supplementary MaterialsSupplementary Table 1. Effects of high-fat diet, exercise and oral nicotinamide mononucleotide supplementation on microbial abundance at genus levelSupplementary Table 2. Effects of high-fat diet, exercise and oral nicotinamide mononucleotide supplementation on microbial abundance at OTU level
DOI: 10.6084/m9.figshare.24171447.v1
title: Supplementary Material

description: Supplementary MaterialsSupplementary Table 1. Effects of high-fat diet, exercise and oral nicotinamide mononucleotide supplementation on microbial abundance at genus levelSupplementary Table 2. Effects of high-fat diet, exercise and oral nicotinamide mononucleotide supplementation on microbial abundance at OTU level