cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57702/md6d1doi
title: Mobile Health (MHEALTH) dataset

description: The Mobile Health (MHEALTH) dataset contains recordings of body motion, and vital signs were taken while 10 volunteers of various profiles engaged in multiple physical activities.
DOI: 10.57702/6hkvb6u0
title: Towards Deep Learning for Predicting Microbial Fuel Cell Energy Output

description: Soil microbial fuel cell energy generation data
DOI: 10.6084/m9.figshare.c.3597128_d1.v1
title: Additional file 2: of The relative importance of kinetic mechanisms and variable enzyme abundances for the regulation of hepatic glucose metabolism â   insights from mathematical modeling

description: The SBML version of the model is supplied as Additional file 2. (XML 83 kb)
DOI: 10.57702/rsa2e9fm
title: TVMI3K

description: A large-scale microscope image dataset of Trichomonas vaginalis for segmentation, consisting of 3,158 images with high-quality annotations.
DOI: 10.57702/d3p6vy61
title: HoloOcean simulator

description: A simulated dataset comprising over 300K pairs of sonar images and their corresponding ground truth poses, collected across 10 distinct scenes.
DOI: 10.6084/m9.figshare.c.3597143_d1.v1
title: Additional file 2: Table S1. of Long-term consequences of in utero irradiated mice indicate proteomic changes in synaptic plasticity related signalling

description: Deregulated proteins found in hippocampus and cortex of in utero irradiated mice in comparison to sham-irradiated mice 6 months post-irradiation using mass spectrometry-based proteomics. Complete detailed list of deregulated proteins (name, unique peptides, n-fold-change, variability and counts per biological replicate) obtained from cortex and hippocampus 6 months after in utero irradiation at doses of 0.1, 0.5 and 1.0 Gy; n = 3. Deregulated proteins were categorised into protein classes using PANTHER classification system software and the general annotation from UniProt as indicated by an asterisk. Green highlighted proteins function as calmodulin/calmodulin protein kinases; orange ones as protein kinases and brown ones as key proteins in MAPK signalling pathway. Table S2. Mass spectrometry-based proteomics – comparison of dose-independent overlapping proteins found in hippocampus and cortex. Overlapping deregulated proteins found in hippocampus and cortex at doses of 0.1, 0.5 and 1.0 Gy are shown with protein names and fold changes; n = 3. Table S3. Antibodies used for immunoblotting. (XLS 138 kb)
DOI: 10.6084/m9.figshare.c.3597146_d2.v1
title: Additional file 8: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

description: Table S5. Analysis of CAZyme families. Table shows (A) a summary of all the CAZyme families with differentially expressed genes, and (B) annotations for each gene. A) Summary of all the CAZyme families with differentially expressed genes, and numbers of CAZymes in each family with higher expression in the medium versus in infected leaf tissue. B) For each of the differentially expressed CAZymes, the table indicates the CAZy annotation, the conserved domains identified using NCBIâ  s Conserved Domain Database, a summary of blastp results using the NCBI nr protein sequence database, JGI gene and protein IDs, the NCBI accession, the location of the gene on the scaffold, the baseMean value (mean of normalized read counts), the log2 fold change (log2FC), the standard error of the log2 fold change estimate (lfcSE), the Wald statistic (stat), the p-value, and the p-value adjusted for multiple testing (adjusted p-value). Genes with higher expression in medium are colored in blue, and genes with higher expression in infected leaf tissue are colored in green. (XLS 80Â kb)
DOI: 10.6084/m9.figshare.c.3597146_d3.v1
title: Additional file 18: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

description: Table S10. RT-qPCR primers used for validation of RNA-Seq results. For each gene of interest, the first tab of the Excel spreadsheet shows the name of the gene, the name and sequence of the forward and reverse primers, and the expected size of the product. The second tab of the spreadsheet shows the reference gene used in Fig.Â 1 for each gene of interest. (XLS 9Â kb)
DOI: 10.6084/m9.figshare.c.3597146_d4.v1
title: Additional file 5: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

description: Table S3. Identification of M. fijiensis salicylate hydroxylase homolog. The Epichloë festucae salicylate hydroxylase sequence (accession number = AIY25489.1) [45] was used to do a blastp search against the M. fijiensis protein sequences using the NCBI non-redundant protein sequence database. For each of the top 10 hits, the table includes a link to the NCBI accession, JGI gene and protein IDs, bitscore, E-value, and percent identity and similarity. Protein sequences corresponding to genes with higher expression in infected leaf tissue are colored green. (XLS 37 kb)
DOI: 10.57702/82gd516l
title: DomainSiam: Domain-Aware Siamese Network for Visual Object Tracking

description: Visual object tracking is a fundamental task in the field of computer vision. Recently, Siamese trackers have achieved state-of-the-art performance on recent benchmarks. However, Siamese trackers do not fully utilize semantic and objectness information from pre-trained networks that have been trained on the image classiﬁcation task.
DOI: 10.6084/m9.figshare.c.3597158_d2.v1
title: Additional file 3: Table S3. of Classification of polyhedral shapes from individual anisotropically resolved cryo-electron tomography reconstructions

description: (in separate Excel spreadsheet due to size): List of 123 polyhedra in the library P $$ \mathcal{P} $$ , together with class and topological profiles (TP). Polyhedral pairs with identical TP are noted. (XLSX 99Â kb)
DOI: 10.57702/6xq4gv4z
title: Diabetes Complications Research Initiative (DCRI) Database

description: The dataset used in the paper is a collection of ECG signals, specifically Diabetes Complications Research Initiative (DCRI) data.
DOI: 10.57702/hng0srjb
title: Tüebingen cause-effect pairs

description: The Tüebingen cause-effect pairs dataset is a well-known benchmark in the context of causal direction detection.
DOI: 10.57702/6ce54b7n
title: UN life expectancy dataset

description: The UN life expectancy dataset is a real-world dataset used to demonstrate the proposed method.
DOI: 10.57702/tlbaewo4
title: Labbehavior dataset

description: The dataset of papers per author shows similarity to the distribution of posts per user in social networks.
DOI: 10.57702/pv6xz3br
title: WEKA library dataset

description: The dataset of papers per author shows similarity to the distribution of posts per user in social networks.
DOI: 10.57702/rsonhqr4
title: Document Summarization Dataset

description: The dataset used in the paper is a document summarization dataset. The goal is to extract sentences (with character budget B) to maximize coverage of human-annotated summaries.
DOI: 10.6084/m9.figshare.c.3597179_d1.v1
title: Additional file 1: of Explaining the geographic spread of emerging epidemics: a framework for comparing viral phylogenies and environmental landscape data

description: Example files and tutorial related to the present study. (ZIP 36167 kb)
DOI: 10.6084/m9.figshare.c.3597146_d13.v1
title: Additional file 10: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

description: Table S7. Blastp results for genes in differentially expressed gene clusters in infected leaf tissue. For each gene in differentially expressed gene clusters, tables indicate its description in Figs.Â 7 and 9, and Additional file 13: Figures S7 and Additional file 14: Figure S8, the JGI gene and protein IDs, the log2 fold change, the adjusted p-value for differential expression, the NCBI accession number, the location of the gene on the M. fijiensis genome scaffold, GO, KOG, and Interpro descriptions from JGI, domains identified using the Conserved Domain Database, and the top 10 blastp hits. Blastp hit information includes a description of the hit, the species where the hit was found, bitscore, E-value, percent identity and similarity, and the NCBI accession. Each tab within the Excel file describes a different cluster, with tabs A-M showing clusters with higher expression in infected leaf tissue (colored in green), and tabs N-R showing clusters with higher expression in culture medium (colored in blue). (XLS 1644Â kb)
DOI: 10.57702/mhazdpnj
title: UCR Time Series Dataset

description: The dataset used in this paper is the UCR time series dataset, which contains 43 datasets. The authors used this dataset to test the performance of their semi-classical neural network architecture.
DOI: 10.6084/m9.figshare.c.3597146_d14.v1
title: Additional file 3: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

description: Table S1. DESeq2 statistics for each gene in the M. fijiensis genome. For each gene, the table indicates the JGI protein and gene IDs, the location of each gene on the scaffold, the baseMean value (mean of normalized read counts), the log2 fold change (log2FC), the standard error of the log2 fold change estimate (lfcSE), the Wald statistic (stat), the p-value, and the p-value adjusted for multiple testing (adjusted p-value). (XLS 3065Â kb)
DOI: 10.57702/7ce36fa7
title: SyntheticControl Dataset

description: The dataset used in this paper is the SyntheticControl dataset, which contains 300 samples. The authors used this dataset to test the performance of their semi-classical neural network architecture.
DOI: 10.57702/fftd38xt
title: ACSPublicCoverage dataset

description: The dataset used in the paper is not explicitly described, but it is mentioned that it is a binary dataset.
DOI: 10.6084/m9.figshare.c.3597146_d16.v1
title: Additional file 6: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

description: Table S4. Differentially expressed transcription factors in infected leaf tissue versus mycelium grown in liquid medium. For each differentially expressed transcription factor gene, the table indicates the conserved domains identified using NCBIâ  s Conserved Domain Database, a summary of blastp results using the NCBI nr protein sequence database, and whether the transcription factor is present in one of the gene clusters that were identified in Additional file 10: Table S7 and [17]. The Table also indicates the JGI gene and protein IDs, the location of the gene on the scaffold, the baseMean value (mean of normalized read counts), the log2 fold change (log2FC), the standard error of the log2 fold change estimate (lfcSE), the Wald statistic (stat), the p-value, and the p-value adjusted for multiple testing (adjusted p-value). Genes with higher expression in medium are colored in blue, and genes with higher expression in infected leaf tissue are colored in green. (XLS 41Â kb)
DOI: 10.6084/m9.figshare.c.3597146_d17.v1
title: Additional file 19: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

description: Table S11. PCR amplification conditions for scaffold 13 and 20 genes. For each gene amplified from scaffolds 13 and 20, the table indicates the gene’s description in Fig. 11, its NCBI accession number, the JGI Gene ID, the scaffold from which it is amplified, the description of the protein product, the sequences of the forward and reverse primers used for amplification, the annealing temperature, the extension time, and the expected product size. (XLS 12 kb)
DOI: 10.6084/m9.figshare.c.3597146_d18.v1
title: Additional file 15: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

description: Table S9. Homologs of genes on scaffolds 15 and 21 of the M. fijiensis genome. For each gene on scaffolds 15 and 21, a blastp search was done using the NCBI non-redundant protein sequence database to identify conserved domains and the best 10 homologs by bitscore for each sequence. For each M. fijiensis sequence of interest, the table includes the JGI protein and gene IDs, a link to the NCBI accession, the location of the gene on each scaffold and a link to the genome browser, the log2 fold change (log2FC), the p-value for differential expression adjusted for multiple testing (adjusted p-value), GO, Interpro, and KOG annotations from JGI, conserved domains identified using NCBIâ  s Conserved Domain Database, and a summary of blastp results using the NCBI nr protein sequence database: species where the homolog was found, a description of the homolog, the bitscore, the E-value, the percent identity and similarity, and a link to the NCBI accession. Genes with higher expression in infected leaf tissue are colored in green. (XLS 235Â kb)
DOI: 10.57702/o4kdiemy
title: MITOS_WSI_CMC

description: Whole slide image annotation dataset for selective whole slide image annotation
DOI: 10.6084/m9.figshare.c.3597146_d19.v1
title: Additional file 4: of Transcriptome sequencing of Mycosphaerella fijiensis during association with Musa acuminata reveals candidate pathogenicity genes

description: Table S2. Differentially expressed genes in infected leaf tissue versus mycelium grown in liquid medium. For each gene, the table includes the JGI protein and gene IDs, the location of each gene on the scaffold, the baseMean value (mean of normalized read counts), the log2 fold change (log2FC), the standard error of the log2 fold change estimate (lfcSE), the Wald statistic (stat), the p-value, the p-value adjusted for multiple testing (adjusted p-value), a summary of blastp results using the NCBI nr protein sequence database, and the conserved domains identified using NCBIâ  s Conserved Domain Database. (XLS 618Â kb)
DOI: 10.57702/27ktuu1s
title: EEG dataset for attention-guided speech decoding

description: A new EEG dataset where the attention of the participants is detected and used to guide the collection of the EEG signals in each experiment.
DOI: 10.57702/u22rx60s
title: EEG for Delineating Objective Measure of Autism Spectrum Disorder (ASD)

description: Autism Spectrum Disorder (ASD) is a developmental disorder that often impairs a child’s normal development of the brain. EEG measures the electric signals of the brain via electrodes placed on various places on the scalp.
DOI: 10.57702/a68029ny
title: EEG analytics for early detection of autism spectrum disorder

description: The dataset used in this study is a collection of EEG signals from individuals with Autism Spectrum Disorder (ASD) and typically developing individuals.
DOI: 10.57702/kx8tfcu5
title: Hierarchical Latent Word Clustering

description: Hierarchical Latent Word Clustering dataset is used to test the proposed Hierarchical Latent Word Clustering algorithm.
DOI: 10.6084/m9.figshare.c.3597209_d9.v1
title: Additional file 3: Table S3. of Analysis of wheat microspore embryogenesis induction by transcriptome and small RNA sequencing using the highly responsive cultivar “Svilena”

description: GO annotation for transcript reconstruction. GO annotation for restructured de novo assembled transcripts based on functional homology using Blast2GO [16] and Trinotate [17]. (XLS 1212 kb)
DOI: 10.57702/aiydjccl
title: NIPS dataset

description: NIPS dataset is used to test the proposed Hierarchical Latent Word Clustering algorithm.
DOI: 10.6084/m9.figshare.c.3597209_d10.v1
title: Additional file 1: Table S1. of Analysis of wheat microspore embryogenesis induction by transcriptome and small RNA sequencing using the highly responsive cultivar “Svilena”

description: Transcript reconstruction. Reconstruction of de novo assembled contigs to wheat transcripts based on known wheat cDNAs. (XLS 1968 kb)
DOI: 10.6084/m9.figshare.c.3597221_d5.v1
title: Additional file 2: of Co-linearity and divergence of the A subgenome of Brassica juncea compared with other Brassica species carrying different A subgenomes

description: Information of the linkage map of the B. juncea constructed with SY-PM population. (XLSX 1052Â kb)
DOI: 10.57702/pir7rbj7
title: Radiology reports dataset

description: Radiology reports dataset is used to test the proposed Hierarchical Latent Word Clustering algorithm.
DOI: 10.6084/m9.figshare.c.3597209_d11.v1
title: Additional file 5: Table S5. of Analysis of wheat microspore embryogenesis induction by transcriptome and small RNA sequencing using the highly responsive cultivar “Svilena”

description: Stage specific transcripts. Listing of restructured de novo assembled transcripts with stage-specific expression (at least 0.5 qnrpm in all replicates) including BLASTx top hits. (XLS 88 kb)
DOI: 10.57702/191btk3v
title: Sherpa: Robust Hyperparameter Optimization for Machine Learning

description: Sherpa is a hyperparameter optimization library for machine learning models. It is specifically designed for problems with computationally expensive, iterative function evaluations, such as the hyperparameter tuning of deep neural networks.
DOI: 10.6084/m9.figshare.c.3597209_d12.v1
title: Additional file 13: Table S12. of Analysis of wheat microspore embryogenesis induction by transcriptome and small RNA sequencing using the highly responsive cultivar “Svilena”

description: miRNA prediction results. Results from miRNA precursor predictions using miRDeep-P [59] performed from sRNA sequencing data individually for all stage replicates. (XLS 790 kb)
DOI: 10.6084/m9.figshare.c.3597209_d13.v1
title: Additional file 6: Table S6. of Analysis of wheat microspore embryogenesis induction by transcriptome and small RNA sequencing using the highly responsive cultivar “Svilena”

description: DE transcripts in T1 and T2. Listing of transcript identifiers for DE, restructured de novo transcripts up- and downregulated in the stage transitions. (XLS 275 kb)
DOI: 10.57702/oe1lkkev
title: Parametric Diﬀerential Machine Learning (PDML) for Pricing and Calibration

description: The dataset used in this paper is a collection of samples of stochastic processes and functionals, used for training and testing the Parametric Diﬀerential Machine Learning (PDML) technique.
DOI: 10.57702/88m3c3uf
title: FB13

description: Knowledge graphs store semantic information in the form of entities and relationships that is easily machine-processable — a property that is considered as an important ingredient to build more intelligent systems by taking advantage of such semantically structured representations.
DOI: 10.6084/m9.figshare.c.3597251_d1.v1
title: Additional file 10: of HIV-1 and HIV-2 exhibit similar mutation frequencies and spectra in the absence of G-to-A hypermutation

description: Table S5. Identification and masking of plasmid error hotspots. Plasmid error hotspots (i.e. common sites for background errors due to PCR or sequencing) were identified by examining the distribution of mutation frequencies at every individual position for the HIV-1 and HIV-2 plasmid controls. Plasmid error hotspots were defined as upper outliers within the distribution using the 1.5Â Ă Â IQR rule. Hotspots identified in both HIV-1 and HIV-2 plasmids were masked from all samples prior to mutational analyses, as they would most likely represent background errors in the biological samples.
DOI: 10.57702/yzvoc9zk
title: WannaLaugh: A Configurable Ransomware Emulator

description: This paper introduces a configurable ransomware emulator designed to generate IO traces in a safe and controlled environment.
DOI: 10.57702/d3herhk7
title: Optical Response of Nanofin Cells

description: The dataset used in the paper is a collection of optical responses of nanofin cells, computed using finite-difference time-domain (FDTD) field calculations.
DOI: 10.57702/j8ui1c23
title: Synthesized Images using Metasurface-Based Architecture

description: The dataset used in the paper is a collection of images synthesized using the proposed metasurface-based architecture.
DOI: 10.57702/hjovcsqq
title: Duee-fin

description: Duee-fin: A document-level event extraction dataset in the financial domain released by Baidu.
DOI: 10.15468/dl.aq6nt7
title: Occurrence Download

description: A dataset containing 990 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ceratitis capitata (Wiedemann, 1824)",
 "Country is United States of America",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 990 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037311-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3597251_d8.v1
title: Additional file 9: of HIV-1 and HIV-2 exhibit similar mutation frequencies and spectra in the absence of G-to-A hypermutation

description: Table S4. Identification of G-to-A hypermutation hotspots in HIV-1 and HIV-2. G-to-A hypermutation hotspots were identified as statistical upper outliers according to the 1.5Â Ă Â IQR rule. For each hotspot, the relative ranking, position, dinucleotide context, mutation frequency, and coding effects are indicated.
DOI: 10.57702/7k6u8upu
title: Metocean data

description: The dataset used for the metocean process discovery is a set of sea surface height data obtained from the NEMO ocean model.
DOI: 10.6084/m9.figshare.c.3597251_d9.v1
title: Additional file 6: of HIV-1 and HIV-2 exhibit similar mutation frequencies and spectra in the absence of G-to-A hypermutation

description: Dataset S2. HIV-1 and HIV-2 hypermutant frequencies determined by Illumina sequencing. For each sample, this dataset lists the numbers of total read pairs, hypermutant read pairs, and hypermutation frequencies for all four possible types of transition hypermutants (G-to-A, A-to-G, C-to-T, T-to-C). Hypermutants were defined as read pairs (~Â 120Â bp in length) containing two or more of the same type of mutation. The data is shown both grouped across all amplicons and separated by amplicon (as different tabs within the spreadsheet).
DOI: 10.6084/m9.figshare.c.3597278_d1.v1
title: Additional file 1: of Factors associated with late recurrence after completion of 5-year adjuvant tamoxifen in estrogen receptor positive breast cancer

description: This file includes raw-data of 583 patientsâ   characteristics and survival. (XLSX 40Â kb)
DOI: 10.6084/m9.figshare.c.3597281_d1.v1
title: Additional file 1: of Sustained release of rhBMP-2 from microporous tricalciumphosphate using hydrogels as a carrier

description: Dataset supporting Fig. 3. (TXT 3 kb)
DOI: 10.6084/m9.figshare.c.3597251_d10.v1
title: Additional file 1: of HIV-1 and HIV-2 exhibit similar mutation frequencies and spectra in the absence of G-to-A hypermutation

description: Table S1. Quantification of plasmid carryover from virus production. The levels of HIV-1 or HIV-2 plasmids from transfections remaining in genomic DNA samples were determined using quantitative PCR-based approaches.
DOI: 10.6084/m9.figshare.c.3597284_d1.v1
title: Additional file 2: of Prevalence of gastrointestinal symptoms in patients with influenza, clinical significance, and pathophysiology of human influenza viruses in faecal samples: what do we know?

description: Studies describing detection and/or isolation of influenza virus in stools of laboratory confirmed influenza patients. (XLSX 12Â kb)
DOI: 10.57702/m900lpqr
title: Russell 3000, 2000, and 1000 Indexes

description: The dataset used in this paper is the Russell 3000, 2000, and 1000 indexes.
DOI: 10.6084/m9.figshare.c.3597281_d2.v1
title: Additional file 3: of Sustained release of rhBMP-2 from microporous tricalciumphosphate using hydrogels as a carrier

description: Dataset supporting Fig. 5. (TXT 1 kb)