cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.cr1496b/12
title: Swe_arctos_Sweden_haploidised_fasta

description: Haploidised fasta sequence generated by mapping Illumina short reads to the reference genome assembly of the giant panda, then randomly selecting a single high quality nucleotide from the read stack for each position of the reference genome. See the original publication for full details. The raw sequencing data is also available from the European Nucleotide Archive. Note that this file will contain abundant errors in comparison to a consensus base call from high coverage data.
DOI: 10.5061/dryad.cr1496b/13
title: Tornatus_haploidised_fasta

description: Haploidised fasta sequence generated by mapping Illumina short reads to the reference genome assembly of the giant panda, then randomly selecting a single high quality nucleotide from the read stack for each position of the reference genome. See the original publication for full details. The raw sequencing data is also available from the European Nucleotide Archive. Note that this file will contain abundant errors in comparison to a consensus base call from high coverage data.
DOI: 10.5061/dryad.cr1496b/14
title: Uamericanus_haploidised_fasta

description: Haploidised fasta sequence generated by mapping Illumina short reads to the reference genome assembly of the giant panda, then randomly selecting a single high quality nucleotide from the read stack for each position of the reference genome. See the original publication for full details. The raw sequencing data is also available from the European Nucleotide Archive. Note that this file will contain abundant errors in comparison to a consensus base call from high coverage data.
DOI: 10.5061/dryad.cr1496b/15
title: Uap_arctos_Pleistocene_Austria_haploidised_fasta

description: Haploidised fasta sequence generated by mapping Illumina short reads to the reference genome assembly of the giant panda, then randomly selecting a single high quality nucleotide from the read stack for each position of the reference genome. See the original publication for full details. The raw sequencing data is also available from the European Nucleotide Archive. Note that this file will contain abundant errors in comparison to a consensus base call from high coverage data.
DOI: 10.5061/dryad.cr1496b/16
title: Uthibetanus_haploidised_fasta

description: Haploidised fasta sequence generated by mapping Illumina short reads to the reference genome assembly of the giant panda, then randomly selecting a single high quality nucleotide from the read stack for each position of the reference genome. See the original publication for full details. The raw sequencing data is also available from the European Nucleotide Archive. Note that this file will contain abundant errors in comparison to a consensus base call from high coverage data.
DOI: 10.5061/dryad.cr1496b/17
title: WH2_maritimus_haploidised_fasta

description: Haploidised fasta sequence generated by mapping Illumina short reads to the reference genome assembly of the giant panda, then randomly selecting a single high quality nucleotide from the read stack for each position of the reference genome. See the original publication for full details. The raw sequencing data is also available from the European Nucleotide Archive. Note that this file will contain abundant errors in comparison to a consensus base call from high coverage data.
DOI: 10.5061/dryad.cr1496b/18
title: WK01_eremus_Austria_haploidised_fasta

description: Haploidised fasta sequence generated by mapping Illumina short reads to the reference genome assembly of the giant panda, then randomly selecting a single high quality nucleotide from the read stack for each position of the reference genome. See the original publication for full details. The raw sequencing data is also available from the European Nucleotide Archive. Note that this file will contain abundant errors in comparison to a consensus base call from high coverage data.
DOI: 10.5061/dryad.df18ft0/1
title: Natatanura raw assembled sequences
DOI: 10.5061/dryad.ft8750v/2
title: Rui-Ci Health Care Data

description: Data were extracted from a computerized database established by the Rich Healthcare Group in China, which includes all medical records for participants who received a health check from 2010 to 2016.
DOI: 10.5061/dryad.g0j11kf/1
title: malaria infection data from mice and mosquitoes

description: Malaria parasite prevalences and densities (gametocytes, oocysts and sporozoites) for mosquito infections of 4 treatment groups, comprising mosquitoes feeding on mice at “mosquito daytime” or “mosquito night time” and ingesting either rodent malaria parasites at “parasite daytime” or “parasite night time”
DOI: 10.5061/dryad.g0j11kf/3
title: Mosquito actiogram raw data (trikinetics monitor file) used to generate average activity profile in figure S2.

description: Locomotor Activity Monitor units (LAM 25) (TriKinetics, Waltham, MA, USA) record individual female mosquito locomotor flight activity. Data were processed using ClockLab software (Actimetrics, Wilmette IL) to generate figure S2, showing the 24-hr activity profile averaged over 3 days of activity for 32 females.
DOI: 10.5061/dryad.g154580/1
title: Python scripts for analysis of ITM data and implementation of the model
DOI: 10.5061/dryad.g154580/2
title: Maple scripts for ITM correction
DOI: 10.5061/dryad.g154580/3
title: Data and Python script for residence time fitting
DOI: 10.5061/dryad.g154580/4
title: SPT TBP residence times
DOI: 10.5061/dryad.g154580/5
title: SPT Sox residence times
DOI: 10.5061/dryad.g154580/6
title: SPT Sox ITM
DOI: 10.5061/dryad.g154580/7
title: SPT TBP ITM
DOI: 10.5061/dryad.g27mq71/1
title: Behavioral data
DOI: 10.5061/dryad.g27mq71/2
title: Plume measurements in air
DOI: 10.5061/dryad.gm18v5f/3
title: GWAS results

description: GWAS of 732 traits (including all 730 traits measured by HCR as well as final grain yield and biomass) identified 402 significantly associated loci.
DOI: 10.5061/dryad.m0c5820/1
title: datasets
DOI: 10.5061/dryad.m55c932/1
title: DRYAD
DOI: 10.5061/dryad.p5217/1
title: Microsatellite data

description: Microsatellite data based on 7 loci of all 405 Gambierdiscus caribaeus strains organised by month of sampling
DOI: 10.5061/dryad.r75251m/1
title: FunctEcol2018_Dataset frigatebirds

description: This table contains data on physiological traits (oxidative stress, immune markers, corticosterone) of nestling frigatebirds.
DOI: 10.5061/dryad.rc02140/1
title: PeakXYAUC

description: Fig.1-2
DOI: 10.5061/dryad.rc02140/2
title: DendriteNumberMeanLength

description: Fig.3-4
DOI: 10.5061/dryad.rc02140/3
title: NeuronGliaRatio

description: Fig.5-6
DOI: 10.5061/dryad.rc02140/4
title: LDHLiveDead

description: Fig.7
DOI: 10.5061/dryad.rc02140/5
title: AUCPeakXYBicuculline

description: Fig.8
DOI: 10.5061/dryad.s267j33/1
title: Kronholm_Ketola_data_scripts

description: The data and R scripts required to repeat the analyses done in the manuscript. Contains a readme file with explanations for the different files and column names.
DOI: 10.5061/dryad.t308jh7/1
title: Behaviour

description: Raw data for behavioural experiments (corresponding to Figure 1)
DOI: 10.5061/dryad.t308jh7/2
title: Imaging

description: Raw data for imaging results (Figure 2)
DOI: 10.5061/dryad.t85bf04/1
title: Behavioural dominance data

description: Details of behavioural dominance relationships among focal species pairs.
DOI: 10.5061/dryad.t85bf04/2
title: Dataset used in analysis

description: Dataset used in analysis, corresponding to the R code.
DOI: 10.5061/dryad.t85bf04/3
title: Full raw dataset

description: Raw dataset including all responses entered separately.
DOI: 10.5061/dryad.t85bf04/4
title: Subset of dataset for species pairs with quantitative dominance data

description: Subset of dataset for species pairs with either accessible, quantitative data on dominance relationships, or whose dominance relationships are based on the results of experiments. Dataset corresponds to a supplemental analysis (see R code line 2344).
DOI: 10.5061/dryad.t85bf04/5
title: R code for analysis

description: R code for all analyses and figures.
DOI: 10.17632/5hy89w885p.1
title: Data for: 3293647

description: Ekonomiczne konsewencje decyzji przedsiębiorstwa Bakoma na podstawie analizy ekonomicznej z użyciem danych mikroekonomicznych i makroekonomicznych/ Economic convergence of Bakoma's decisions based on economic analysis using microeconomic and macroeconomic data
DOI: 10.17632/7v33zp2rr4.1
title: Data for: 3294271

description: Thanks to the financial management exercises, we got acquainted with macroeconomic and microeconomic indicators. We used websites such as www.obligacje.pl, www.web.archiwe.org and the university library database where we could use the data we were interested in to determine the financial policy of Tarczyński. During the exercises, we completed assessments of the food company Tarczyński and in my homework I carried out an assessment of the financial policy of ZOTT POLSKA SA. zoo In order to be able to determine the company's activities, the following indicators must be analyzed: CC - price of capital, Kd- foreign capital, Ke - Equity, Krf - risk-free rate, Leveta (risk ratio), NOPAT - operating profit after tax, EVA - economic value added, D-capital, E-supplementary capital, d-relation to supplementary capital, D to supplementary capital, ROA - operating profitability of assets, ROE - net profit to equity. Liquidity ratios, such as WBP (Inventories + receivables + cash) / Short-term liability), WPP (Current assets - short-term inventory / liabilities), CCT (Current assets - receivables / short-term liabilities).
DOI: 10.17632/b5ztv8m6cr.1
title: Data for: 3293652

description: Ekonomiczne konsewencje decyzji przedsiębiorstwa Bakoma na podstawie analizy ekonomicznej z użyciem danych mikroekonomicznych i makroekonomicznych/ Economic convergence of Bakoma's decisions based on economic analysis using microeconomic and macroeconomic data
DOI: 10.17632/hyntpr6xm2.1
title: Data for: Ekonomiczne konsekwencje decyzji przedsiębiorstwa Samsung Electronics Polska Sp. z o.o. na podstawie analizy ekonomicznej z użyciem danych mikroekonomicznych i makroekonomicznych. Angielska wersja tytułu – Economic consequences of the decisio...

description: Streszczenie: Podejmowanie decyzji to proces, który ma na celu wybór najkorzystniejszego rozwiązania. Obejmuje on grupę operacji myślowych oraz obliczeniowych. Aby ulepszyć procesy decyzyjne wykorzystuje się różne metody i techniki oparte na dziedzinie matematycznej i statystycznej. Podejmowanie decyzji jest podstawowym warunkiem rozwiązywania większości problemów występujących w przedsiębiorstwie. W każdym przypadku analiza różnych decyzji wymaga porównania korzyści i kosztów różnych sposobów postępowania. Abstract: Making decisions is a process that aims to choose the best solution. It includes a group of thought and computational operations. To improve the decision-making processes, various methods and techniques based on the mathematical and statistical field are used. Making decisions is a basic condition for solving most problems occurring in the enterprise. In each case, the analysis of the various decisions requires a comparison of the benefits and costs of the different procedures. Zakończenie: Decyzje operacyjne związane są ze specyfiką działalności przedsiębiorstwa i jego przynależnością do konkretnej branży. W tej grupie decyzji można wyróżnić obszary wyboru niezależne od przedsiębiorstwa, wynikające z cech jego sfery realnej, wyznaczające indywidualny profil ryzyka, oraz decyzje podlegające swobodnemu kształtowaniu (np. związane z pozycją rynkową przedsiębiorstw). Decyzje operacyjne związane są głównie ze zmianą i poziomem zysku operacyjnego, przepływów pieniężnych z działalności operacyjnej, stanu aktywów obrotowych i źródeł ich finansowania.
DOI: 10.17632/xn6yt565cz.1
title: Data for: 3293945

description: Ekonomiczne konsekwencje decyzji przedsiębiorstwa PKN Orlen na podstawie analizy ekonomicznej z użyciem danych mikroekonomicznych i makroekonomicznych.
DOI: 10.5061/dryad.1c1g42k/1
title: Reproductive rates

description: Reproduction for twenty-seven tree species observed flowering or fruiting during the first seven years of a reforestation experiment. Reproduction (column "REPRODUCTION" in data) was coded as a 1 if the individual was observed flowering or fruiting during a particular census and 0 otherwise. The column "CENSUS" represents the numeric id of each census (18 total), "ID" represents the unique ID of each individual plant, "SPECIES" represents the species name, "PLOT" represents the identity of the 30 x 30 m plot, "SUBPLOT" represents the identity of 13 x 13 m plots within each plot, "TREATMENT" represents the planting treatment (A=animal-dispersed plantings, W=wind-dispersed plantings, C=Control), "SIZE" represents the basal diameter (in mm) of each individual, and "YEAR" represents the year of each census.
DOI: 10.5061/dryad.1c1g42k/2
title: Growth rates

description: Data on growth for fifty tree species during the first seven years of a reforestation experiment. Growth rates (column "GROWTH" in data) represent the difference in individual size (basal diameter measured in mm) between consecutive censuses. The column "CENSUS" represents the numeric id of each census, "ID" represents the unique ID of each individual plant, "SPECIES" represents the species name, "PLOT" represents the identity of the 30 x 30 m plot, "SUBPLOT" represents the identity of 13 x 13 m plots within each plot, "TREATMENT" represents the planting treatment (A=animal-dispersed plantings, W=wind-dispersed plantings, C=Control), "SIZE" represents the basal diameter (in mm) of each individual (at the start of each growth interval), "YEAR" represents the year of each census, and "MONTH" represents months since surveys began.
DOI: 10.5061/dryad.1c1g42k/3
title: Presence/absence data

description: Presence/absence of natural recruits during the first seven years of a reforestation experiment. Presence is represented by 18 columns, each named "Presence_" followed by the numeric identity of each census. Prior to the first record of individual occurrence, presence is recorded as "NA." After first occurrence, each individual was recorded as "1" if it was present during that particular census and "0" if it was absent.  The column "ID" represents the unique ID of each individual plant, "SPECIES" represents the species name, "PLOT" represents the identity of the 30 x 30 m plot, "SUBPLOT" represents the identity of 13 x 13 m plots within each plot, "TREATMENT" represents the planting treatment (A=animal-dispersed plantings, W=wind-dispersed plantings, C=Control), "FIRST_SIZE" represents the basal diameter (in mm) of each individual during the first census in which it was recorded.
DOI: 10.5061/dryad.1c1g42k/4
title: All natural recruits

description: Total number of natural recruits of each species that recruited in experimental plots during the course of the study. The column "COUNT" represents the total number of each species in each 13 x 13 m subplot. The column "SPECIES" represents the species name, "PLOT" represents the identity of the 30 x 30 m plot, "SUBPLOT" represents the identity of 13 x 13 m plots within each plot,  and "TRT" represents the planting treatment (A=animal-dispersed plantings, W=wind-dispersed plantings, C=Control).
DOI: 10.5061/dryad.1c1g42k/5
title: All reproductive recruits

description: Total number of natural recruits of each species that recruited in experimental plots and reproduced during the course of the study. The column "COUNT" represents the total number of reproductive individuals of each species in each 13 x 13 m subplot. The column "SPECIES" represents the species name, "PLOT" represents the identity of the 30 x 30 m plot, "SUBPLOT" represents the identity of 13 x 13 m plots within each plot, and "TRT" represents the planting treatment (A=animal-dispersed plantings, W=wind-dispersed plantings, C=Control).
DOI: 10.5061/dryad.1sv2t4c/1
title: indirecteffect_fordryad
DOI: 10.5061/dryad.2168568/1
title: mite-UCE-probe-set

description: fasta of UCE probes designed to work across mites
DOI: 10.5061/dryad.2tn1rf9/2
title: Total number of visits and dispersed seeds per disperser

description: Total number of visits of each of the six frugivores that consume P. splendens, and total number of seeds dispersed during 2638 hours of video monitoring.
DOI: 10.5061/dryad.2tn1rf9/3
title: Total number of visits and dispersed seeds during 2015

description: Total number of visits of each of the six frugivores that consume P. splendens, and total number of seeds dispersed during 2015 (473 h of video monitoring)
DOI: 10.5061/dryad.2tn1rf9/4
title: Total number of visits and dispersed seeds during 2016

description: Total number of visits of each of the six frugivores that consume P. splendens, and total number of seeds dispersed during 2016 (2165 hours of video monitoring)
DOI: 10.5061/dryad.31vb2c3/1
title: EphemeralForests

description: These data describe forest cover, forest persistence, and potential spatial covariates of forest persistence in southern Costa Rica from 1947-2014. data_EphemeralForests.csv contains the data for each forest. R_EphemeralForests.R contains the R code used to perform the analyses. LC_Final_ReidFaganSHARE_expWGS84.zip contains a shapefile with each forests's location and information about persistence (further metadata is included in the shapefile and so is not described here).
DOI: 10.5061/dryad.3f7hk01/1
title: Pakanen_et_al_Oecologia_Foraging

description: Foraging data
DOI: 10.5061/dryad.5089j74/1
title: Lifespan

description: Lifespan data from D. melanogaster (the Dahomey laboratory-adapted population), measured in vials. Numerical columns are days since start of experiment and their content is number of deaths since previous column.
DOI: 10.5061/dryad.5089j74/2
title: Viability

description: Egg-to-adult viability data from D. melanogaster (the Dahomey laboratory-adapted population), measured in vials. Focal F is number of eclosed females and Focal M number of eclosed males. Ebony is number of eclosed competitor flies.
DOI: 10.5061/dryad.5089j74/3
title: Reproductive Output

description: Data on reproductive output as number of eclosed offspring from D. melanogaster (the Dahomey laboratory-adapted population), measured in vials. The output in each vial is the sum of focal and ebony flies eclosed for each week.  Numbers in column headings represents weeks since start of experiment. NA represents no counting due to all focal flies being deceased. For week 9 all ebony competitors for the male focals were at least 200. The number of offspring eclosed came from a number of parents in the vial recorded in the Lifespan file for focal flies and the Competitors file for ebony competitors.
DOI: 10.5061/dryad.5089j74/4
title: Competitors

description: Number of ebony competitor flies alive (Drosophila melanogaster, Damohey lab-adapted population) for measurement of reproductive output.
DOI: 10.5061/dryad.5878v18/1
title: Cactus spine morphology and puncture data

description: Data for cactus spine tip morphology, puncture and withdraw data for first puncture by spines of 6 species, and puncture and withdraw data for 5 puncture trials by spines of 6 species
DOI: 10.5061/dryad.63227hg/1
title: Plant Species Cover by Plot and Year

description: METADATA FOR RAMSHORN PHRAGMITIES TREATMENT - VEGETATION COVER DATA. Percent cover by species was estimated in 1 m2 randomly located plots within and surrounding five Phragmites stands. Each row is an individual species by plot and the columns include: year sampled, Phragmites stand #, plot number, plot type, species code, species full name, percent cover, and native/exotic. Plot type heading indicates if plot was in the interior of the stand or in the surrounding reference plant community. See Methods for details. For all years, sampling was in August before treatment in September.
DOI: 10.5061/dryad.63227hg/2
title: Phragmites Live and Dead Stem Count

description: METADATA FOR RAMSHORN PHRAGMITIES TREATMENT - PHRAGMITIES STEM COUNT. Alive and dead Phragmites stems were counted in 1 m2 plots that were randomly located within five Phragmites stands. Each row is a plot and columns include: Phragmites stand #, year sampled, live stem, dead stem, stem height (m), and litter depth (cm). See Methods for details. For all years, sampling was in August before treatment in September.
DOI: 10.5061/dryad.63227hg/3
title: Phragmites Stand GIS File

description: ArcGIS shapefile of five treated Phragmites stands in coordinate system NAD83 UTM Zone 18. Data collect with Trimble GPS unit.
DOI: 10.5061/dryad.6502mg2/1
title: Trait measurements of 15 Alexandrium ostenfeldii strains isolated from two distinct locations
DOI: 10.5061/dryad.6n4g650/1
title: Garlovksy and Snook 2018 Ecology and Evolution

description: Data file consists of 5 excel workbook pages, where each page contains data from a different experiment presented in the paper. Readme file provides the link between these data and figures/tables in the paper, describing what each column of data signifies.
DOI: 10.5061/dryad.6r2p226/1
title: Coloma DATA

description: Population data from the community experiment. Units are individuals / ml and time units are weeks
DOI: 10.5061/dryad.6tg35t6/1
title: widiv_942g_899784SNPs_imputed_filteredGenos_noRTA_AGPv4.hmp.txt.zip

description: Imputed data of 899,784 SNPs generated from RNA-Seq reads of 942 inbred lines. SNPs were called from mapping to the version 4 maize B73 (AGPv4) reference sequence. Imputation was done using fastPHASE v1.4.0 (Scheet and Stephens, 2006).
DOI: 10.5061/dryad.6v7j674/1
title: supplementary_data_01_training

description: Training data for vocal conditioning.
DOI: 10.5061/dryad.846st51/1
title: Source data for all analyses

description: Excel spreadsheet containing all raw data.
DOI: 10.5061/dryad.846st51/2
title: figure1reproductivefitnessrange

description: Figure 1 R code
DOI: 10.5061/dryad.846st51/3
title: figure2aheatwavereproductivefitness

description: Figure 2a R code
DOI: 10.5061/dryad.846st51/4
title: figure2bcompetition

description: Figure 2b R code
DOI: 10.5061/dryad.846st51/5
title: figure2cheatwavehardening

description: Figure 2c R code
DOI: 10.5061/dryad.84q76/1
title: bandingdata

description: Bird capture data with associated species 4-letter alpha code, banding number, and individual morphometrics. The number of bryophyte propagules found on various surfaces are included.
DOI: 10.5061/dryad.84q76/2
title: Germination of bryophytes

description: Contains the germination events for samples taken from birds.
DOI: 10.5061/dryad.8hq6qv2/10
title: Table_S3

description: Salvelinus alpinus coordinates for 11/17 outlier loci, alignment scores, annotation features, and associated functional group.
DOI: 10.5061/dryad.926bs5d/1
title: Wagner_R_Code

description: R code for estimating the probabilities of branch durations on trees of fossil taxa given different origination, extinction & sampling rates from different intervals of time.
DOI: 10.5061/dryad.926bs5d/2
title: Supplementary Material

description: Analyses to augment points of the paper, plus code.
DOI: 10.5061/dryad.bn796qq/1
title: Appendices

description: A. Summary table of archosauromorphs, median femur lengths and ages
B. KH and SH test outputs
C. Phylo-D outputs for supertrees C, D and E
D. PGLS outputs for supertrees C, D and E
DOI: 10.5061/dryad.bn796qq/2
title: Archosaur femur data

description: All collected femur data with notes
DOI: 10.5061/dryad.bn796qq/3
title: Archosaur mode of life data

description: Table of modes of life for each archosauromorph species
DOI: 10.5061/dryad.bn796qq/4
title: Occ_data

description: Occurrence data in an R-suitable format
DOI: 10.5061/dryad.bn796qq/5
title: Occ_data_femurs

description: Occ_data with femur length column included
DOI: 10.5061/dryad.bn796qq/6
title: Andres

description: Nexus file suitable for IQTREE
DOI: 10.5061/dryad.bn796qq/7
title: Cabreira

description: Nexus file suitable for IQTREE