cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4049045
title: The data generated or compiled in the study of "Diverse polygonal patterned grounds in the northern Eridania basin, Mars: Possible origins and implications"

description: The data that we generated or compiled, that is used to make a figure (e.g. geologic maps (Figure 2), mapped ridges (included in Figure 2), tables of measurements underlying the histograms (Figures 10 and 18), crater counts (Figure 12)), are placed in a public data repository outside of the JGR paywall. They have been introduced in the following publication, where more details can be found: Y. Dang, F. Zhang, J. Zhao, J. Wang, Y. Xu, T. Huang, and L. Xiao Diverse Polygonal Patterned Grounds in the Northern Eridania Basin, Mars: Possible Origins and Implications. Journal of Geophysical Research: Planets, 2020,125, e2020JE006647. https://<br> doi.org/10.1029/2020JE006647 The file format is "Shp" processed in the software ArcGIS 10.6. The detailed description and information can be found in the title of each file below, and also their corresponding figure caption in the paper after it is formally published.
DOI: 10.5281/zenodo.4049044
title: The data generated or compiled in the study of "Diverse polygonal patterned grounds in the northern Eridania basin, Mars: Possible origins and implications"

description: The data that we generated or compiled, that is used to make a figure (e.g. geologic maps (Figure 2), mapped ridges (included in Figure 2), tables of measurements underlying the histograms (Figures 10 and 18), crater counts (Figure 12)), are placed in a public data repository outside of the JGR paywall. They have been introduced in the following publication, where more details can be found: Y. Dang, F. Zhang, J. Zhao, J. Wang, Y. Xu, T. Huang, and L. Xiao Diverse Polygonal Patterned Grounds in the Northern Eridania Basin, Mars: Possible Origins and Implications. Journal of Geophysical Research: Planets, 2020,125, e2020JE006647. https://<br> doi.org/10.1029/2020JE006647 The file format is "Shp" processed in the software ArcGIS 10.6. The detailed description and information can be found in the title of each file below, and also their corresponding figure caption in the paper after it is formally published.
DOI: 10.6084/m9.figshare.14999979
title: Maximized Lake Dynamics Base Data - Bathymetry, Seeds, and Extents

description: Base datasets used in journal manuscript <i>Maximizing Multi-Decadal Water Surface Elevation Estimates with Landsat Imagery and Elevation/Bathymetry Datasets.</i><i><br></i>Contains merged dem/bathymetry datasets, lake seeds, and lake extents.
DOI: 10.5281/zenodo.5220199
title: Datasets to produce figures of the manuscript "Quantum Critical Points and the Sign Problem"

description: Datasets to produce figures of the manuscript "Quantum Critical Points and the Sign Problem" Contents: All figures are divided by folders, Main_text (Figs. 1 to 4) and Supplemental Material (Figs. S1 to S11). In each folder the data files (.dat) and scripts (.py) that generate the figures are included. Data files have easily readable names, with relevant parameters explicitly given. Using Python 3+ with an updated Matplotlib can directly reproduce the figures in the manuscript. We further include the Figures (.pdf or .png) in the corresponding folders for convenience.
DOI: 10.7910/dvn/i9p4zw
title: Research Project 1

description: This is a test research project. Project name is research project 1.
DOI: 10.17608/k6.auckland.15184092
title: ENVDIST_interim-data.zip

description: Temperature and salinity data from World Ocean Atlas 2018 were selected from within MEOW ecoregions and ecoprovinces using an overlay analysis (Intersect tool, ArcMap version 10.6), with MEOW identifier codes assigned to each intersecting point. <br>
DOI: 10.17608/k6.auckland.15184092.v1
title: ENVDIST_interim-data.zip

description: Temperature and salinity data from World Ocean Atlas 2018 were selected from within MEOW ecoregions and ecoprovinces using an overlay analysis (Intersect tool, ArcMap version 10.6), with MEOW identifier codes assigned to each intersecting point. <br>
DOI: 10.6084/m9.figshare.14987211
title: Characterising the response of vegetation cover to water limitation in Africa using geostationary satellites

description: Ecohydrological metrics of vegetation over Africa at 0.0417° resolution. The data are derived from the Fraction of Vegetation Cover (FVC) product estimated by Trigo et al., 2011 using the retrievals of the geostationary satellite Meteosat Second Generation. The data consist 3 files as: (i) asymptotic minimum and maximum FVC, (ii) FVC integral of the dry season, and its duration of the corresponding decay period, and (iii) the decay rate of FVC during dry-down. Files (ii) and (iii) has variation as a quality diagnostic. In addition, (iii) has number of convergences as another quality diagnostic. Dataset Reference: Küçük Ç., Koirala S., Carvalhais N., Miralles D.G., Reichstein M., and Jung M. (2021) Characterising the response of vegetation cover to water limitation in Africa using geostationary satellites.
DOI: 10.6084/m9.figshare.14987211.v1
title: Characterising the response of vegetation cover to water limitation in Africa using geostationary satellites

description: Ecohydrological metrics of vegetation over Africa at 0.0417° resolution. The data are derived from the Fraction of Vegetation Cover (FVC) product estimated by Trigo et al., 2011 using the retrievals of the geostationary satellite Meteosat Second Generation. The data consist 3 files as: (i) asymptotic minimum and maximum FVC, (ii) FVC integral of the dry season, and its duration of the corresponding decay period, and (iii) the decay rate of FVC during dry-down. Files (ii) and (iii) has variation as a quality diagnostic. In addition, (iii) has number of convergences as another quality diagnostic. Dataset Reference: Küçük Ç., Koirala S., Carvalhais N., Miralles D.G., Reichstein M., and Jung M. (2021) Characterising the response of vegetation cover to water limitation in Africa using geostationary satellites.
DOI: 10.6084/m9.figshare.15205881
title: Psychometric assessment of the Persian translation of the COVID-19 attitudes and behaviors (ACAB)

description: The current study aims to translate the COVID-19 attitudes and behaviors into the Persian language, then evaluates the psychometric properties of the Persian version of COVID-19 attitudes and behaviors in the Iranian sample.
DOI: 10.6084/m9.figshare.15205881.v1
title: Psychometric assessment of the Persian translation of the COVID-19 attitudes and behaviors (ACAB)

description: The current study aims to translate the COVID-19 attitudes and behaviors into the Persian language, then evaluates the psychometric properties of the Persian version of COVID-19 attitudes and behaviors in the Iranian sample.
DOI: 10.17608/k6.auckland.15184095
title: ENVDIST_final-data.zip

description: Environmental distance is a measure of the similarity in environmental conditions between two geographic locations (Keller et al. 2011). A low environmental distance value between two locations indicates high environmental similarity. The Marine Ecoregions Of the World (MEOW) biogeographic classification system divides the coastal, nearshore, and shelf areas of the world into a nested hierarchy of 232 ecoregions, 62 ecoprovinces, and 12 ecorealms (Spalding et al. 2007). In this dataset, environmental distances were calculated between each pair of MEOW ecoregions and ecoprovinces, using temperature and salinity data from World Ocean Atlas (2018). <br><br>The final dataset consists of two matrices, one for 232 ecoregions and one for 62 ecoprovinces. For each matrix, the ecoregions or ecoprovinces are listed in the same order in both rows and columns. Environmental distance values between each pair of ecoregions or ecoprovinces can be found at the intersection of row and column for the members of the pair. For some ecoregions, no temperature and/or salinity data were available in the World Ocean Atlas. Data gaps in the ecoregions matrix are indicated with NA. <br>
DOI: 10.17608/k6.auckland.15184095.v1
title: ENVDIST_final-data.zip

description: Environmental distance is a measure of the similarity in environmental conditions between two geographic locations (Keller et al. 2011). A low environmental distance value between two locations indicates high environmental similarity. The Marine Ecoregions Of the World (MEOW) biogeographic classification system divides the coastal, nearshore, and shelf areas of the world into a nested hierarchy of 232 ecoregions, 62 ecoprovinces, and 12 ecorealms (Spalding et al. 2007). In this dataset, environmental distances were calculated between each pair of MEOW ecoregions and ecoprovinces, using temperature and salinity data from World Ocean Atlas (2018). <br><br>The final dataset consists of two matrices, one for 232 ecoregions and one for 62 ecoprovinces. For each matrix, the ecoregions or ecoprovinces are listed in the same order in both rows and columns. Environmental distance values between each pair of ecoregions or ecoprovinces can be found at the intersection of row and column for the members of the pair. For some ecoregions, no temperature and/or salinity data were available in the World Ocean Atlas. Data gaps in the ecoregions matrix are indicated with NA. <br>
DOI: 10.5517/ccdc.csd.cc2832vb
title: CCDC 2088341: Experimental Crystal Structure Determination

description: Related Article: Fei Zhao, Jin Qiao, Yangbin Lu, Xiaoning Zhang, Long Dai, Xin Gong, Hui Mao, Shiyao Lu, Xiaowei Wu, Siyu Liu|2021|Org.Lett.|23|5766|doi:10.1021/acs.orglett.1c01929
DOI: 10.5517/ccdc.csd.cc283dng
title: CCDC 2088645: Experimental Crystal Structure Determination

description: Related Article: Wei Dong, Zhuo-Yue Fang, Tong-Yang Cao, Jie-Hui Cao, Zi-Qiang Zhao, Linlin Zhang, Wei Li, Lin Qi, Li-Jing Wang|2021|Org.Lett.|23|5809|doi:10.1021/acs.orglett.1c01962
DOI: 10.5517/ccdc.csd.cc2858nd
title: CCDC 2090443: Experimental Crystal Structure Determination

description: Related Article: Balu D. Dherange, Patrick Q Kelly, Jordan P Liles, Matthew S Sigman, Mark D. Levin|2021|J.Am.Chem.Soc.|143|11337|doi:10.1021/jacs.1c06287
DOI: 10.4119/unibi/2956375
title: Data publication for "Medium-induced fragmentation and equilibration of highly energetic partons"

description: Data Publication for "Medium-induced fragmentation and equilibration of highly energetic parton", published in JHEP 07 (2021) 077 available at arXiv:2008.04928 Contains data and scripts for the plots.
DOI: 10.4119/unibi/2956379
title: Supplementary material for "sc3nb: a Python-SuperCollider Interface for Auditory Data Science"

description: This research data publication contains supplementary material that accompanies the publication "sc3nb: a Python-SuperCollider Interface for Auditory Data Science". As the sc3nb code is public and available via http://github.com/interactive-sonification/sc3nb, we here provide only specific audio files and code examples, i.e. a Jupyter notebook.
DOI: 10.6084/m9.figshare.15261906.v1
title: Simple muscle twitch LabChart data file

description: LabChart data file of simple muscle twitch. The file can be opened using LabChart reader provided freely by ADInstruments, Australia at: https://www.adinstruments.com/products/labchart-reader
DOI: 10.6084/m9.figshare.15261924.v1
title: Supplementary Table 1.xlsx

description: Predicted virulence factors in STEC865 and STEC866 strains.
DOI: 10.6084/m9.figshare.15261924
title: Supplementary Table 1. Predicted virulence factors in STEC865 and STEC866 strains

description: Predicted virulence factors in STEC865 and STEC866 strains.
DOI: 10.6084/m9.figshare.15261924.v3
title: Supplementary Table 1. Predicted virulence factors in STEC865 and STEC866 strains

description: Predicted virulence factors in STEC865 and STEC866 strains.
DOI: 10.6084/m9.figshare.15261924.v2
title: Supplementary Table 1. Predicted virulence factors in STEC865 and STEC866 strains

description: Predicted virulence factors in STEC865 and STEC866 strains.
DOI: 10.6084/m9.figshare.15261729
title: Supplementary Material for: Comparison of Absorbable Packing versus No Packing in Wound Healing after Endoscopic Sinus Surgery: A Systematic Review and Pooled Analysis

description: <b><i>Introduction:</i></b> Nasal packing after endoscopic sinus surgery (ESS) is controversial. The aim of this systematic review was to compare absorbable packing versus no packing in wound healing after ESS for the treatment of chronic rhinosinusitis. <b><i>Data Source:</i></b> English electronic databases, including Cochrane Library, EMBASE, MEDLINE, and PubMed, were searched, and only randomized controlled trials were included. <b><i>Methods:</i></b> The outcome measures were the presence of synechiae/adhesion formation, mucosal edema, crusting, granulation formation, and infection. The McNemar’s test was used for pooled analysis. <b><i>Results:</i></b> Four studies with 148 participants were included. The pooled analysis showed that absorbable packing may offer benefit in reducing adhesion at 6–8 weeks (odds ratio [OR]: 0.3864; 95% confidence interval [CI]: 0.2136–0.7235) and 12 weeks (OR: 0.2396, 95% CI: 0.08267–0.7709) postoperatively compared with no packing. There was no significant difference between the packed and the unpacked side at 2, 6–8, and 12 weeks after ESS in terms of presence of crusting, edema, and granulation formation. <b><i>Conclusion:</i></b> There is insufficient evidence to suggest that absorbable packing after ESS does not increase mucosal edema, granulation formation, and infection. However, the absorbable packing may be more effective than no packing for the prevention of mucosal adhesion after ESS. The use of absorbable nasal packing after ESS is recommended when used to reduce postoperative mucosal adhesion. More research in this area is clearly needed.
DOI: 10.25625/9grfsc/tbrbau
title: 20210528-MSc-Rzayev.pdf

description: :unav
DOI: 10.25625/9grfsc
title: Community Software as a Service Integrated to a Modern Data Center

description: The technology of cloud computing enables the efficient use of distributed and on-demand resources. Busi- nesses have attempted to utilize the benefits of cloud computing through the migration of their legacy applications to a cloud environment to offer a software-as-a-service model. This model is beneficial if legacy applications support a multi-tenancy architecture, enabling the customers to share a single application at any given time. The two significant benefits of a multi-tenancy architecture include the low maintenance costs and efficient usage of hardware resources. However, the migration of a single-tenancy legacy application comprises numerous intricacies and an equal number of challenges. We have described the necessary steps required to migrate applications to the cloud environment and the incorporation of additional components for the deployment of multi-tenancy. This paper includes the description for designing and implementing multi-tenancy architectures for successful migration of legacy applications to the cloud environment, along with the evaluation of the devised solution through the legacy application Diversity Workbench. The thesis was submitted in partial fulfillment of the requirements for the course “Applied Computer Science” and was supervised by Prof. Ramin Yahyapour (GWDG) and Dr. Sven Bingert (GWDG).
DOI: 10.6084/m9.figshare.3795996
title: combined ESM

description: Species richness varies dramatically among clades across the Tree of Life, by over a million-fold in some cases (e.g. placozoans versus arthropods). Two major explanations for differences in richness among clades are the clade-age hypothesis (i.e. species-rich clades are older) and the diversification-rate hypothesis (i.e. species-rich clades diversify more rapidly, where diversification rate is the net balance of speciation and extinction over time). Here, we examine patterns of variation in diversification rates across the Tree of Life. We address how rates vary across higher taxa, whether rates within higher taxa are related to the subclades within them, and how diversification rates of clades are related to their species richness. We find substantial variation in diversification rates, with rates in plants nearly twice as high as in animals, and rates in eukaryotes approximately 10-fold faster than prokaryotes. Rates for each kingdom-level clade are then significantly related to the subclades within them. Although caution is needed when interpreting relationships between diversification rates and richness, a positive relationship between the two is not inevitable. We find that variation in diversification rates seems to explain most variation in richness among clades across the Tree of Life, in contrast with the conclusions of previous studies.
DOI: 10.6084/m9.figshare.3795996.v1
title: combined ESM

description: Species richness varies dramatically among clades across the Tree of Life, by over a million-fold in some cases (e.g. placozoans versus arthropods). Two major explanations for differences in richness among clades are the clade-age hypothesis (i.e. species-rich clades are older) and the diversification-rate hypothesis (i.e. species-rich clades diversify more rapidly, where diversification rate is the net balance of speciation and extinction over time). Here, we examine patterns of variation in diversification rates across the Tree of Life. We address how rates vary across higher taxa, whether rates within higher taxa are related to the subclades within them, and how diversification rates of clades are related to their species richness. We find substantial variation in diversification rates, with rates in plants nearly twice as high as in animals, and rates in eukaryotes approximately 10-fold faster than prokaryotes. Rates for each kingdom-level clade are then significantly related to the subclades within them. Although caution is needed when interpreting relationships between diversification rates and richness, a positive relationship between the two is not inevitable. We find that variation in diversification rates seems to explain most variation in richness among clades across the Tree of Life, in contrast with the conclusions of previous studies.
DOI: 10.6084/m9.figshare.3795999
title: Appendix tables

description: Darwin's naturalization hypothesis (DNH), which predicts that alien species more distantly related to native communities are more likely to naturalize, has received much recent attention. The mixed findings from empirical studies that have tested DNH, however, seem to defy generalizations. Using meta-analysis to synthesize results of existing studies, we show that the predictive power of DNH depends on both the invasion stage and spatial scale of the studies. Alien species more closely related to natives tended to be less successful at the local scale, supporting DNH; invasion success, however, was unaffected by alien–native relatedness at the regional scale. On the other hand, alien species with stronger impacts on native communities tended to be more closely related to natives at the local scale, but less closely related to natives at the regional scale. These patterns are generally consistent across different ecosystems, taxa and investigation methods. Our results revealed the different effects of invader–native relatedness on invader success and impact, suggesting the operation of different mechanisms across invasion stages and spatial scales.
DOI: 10.6084/m9.figshare.3795999.v1
title: Appendix tables

description: Darwin's naturalization hypothesis (DNH), which predicts that alien species more distantly related to native communities are more likely to naturalize, has received much recent attention. The mixed findings from empirical studies that have tested DNH, however, seem to defy generalizations. Using meta-analysis to synthesize results of existing studies, we show that the predictive power of DNH depends on both the invasion stage and spatial scale of the studies. Alien species more closely related to natives tended to be less successful at the local scale, supporting DNH; invasion success, however, was unaffected by alien–native relatedness at the regional scale. On the other hand, alien species with stronger impacts on native communities tended to be more closely related to natives at the local scale, but less closely related to natives at the regional scale. These patterns are generally consistent across different ecosystems, taxa and investigation methods. Our results revealed the different effects of invader–native relatedness on invader success and impact, suggesting the operation of different mechanisms across invasion stages and spatial scales.
DOI: 10.6084/m9.figshare.3796020
title: Table S2 RNA-seq data

description: Once every menstrual cycle, eggs are ovulated into the oviduct where they await fertilization. The ovulated eggs are arrested in metaphase of the second meiotic division, and only complete meiosis upon fertilization. It is crucial that the maintenance of metaphase arrest is tightly controlled, because the spontaneous activation of the egg would preclude the development of a viable embryo (Zhang <i>et al.</i> 2015 <i>J. Genet. Genomics</i> <b>42</b>, 477–485. (doi:10.1016/j.jgg.2015.07.004); Combelles <i>et al.</i> 2011 <i>Hum. Reprod.</i> <b>26</b>, 545–552. (doi:10.1093/humrep/deq363); Escrich <i>et al.</i> 2011 <i>J. Assist Reprod. Genet.</i> <b>28</b>, 111–117. (doi:10.1007/s10815-010-9493-5)). However, the mechanisms that control the meiotic arrest in mammalian eggs are only poorly understood. Here, we report that a complex of BTG4 and CAF1 safeguards metaphase II arrest in mammalian eggs by deadenylating maternal mRNAs. As a follow-up of our recent high content RNAi screen for meiotic genes (Pfender <i>et al.</i> 2012 <i>Curr. Biol.</i> <b>21</b>, 955–960. (doi:10.1016/j.cub.2011.04.029)), we identified <i>Btg4</i> as an essential regulator of metaphase II arrest. <i>Btg4-</i>depleted eggs progress into anaphase II spontaneously before fertilization. BTG4 prevents the progression into anaphase by ensuring that the anaphase-promoting complex/cyclosome (APC/C) is completely inhibited during the arrest. The inhibition of the APC/C relies on EMI2 (Tang <i>et al.</i> 2010 <i>Mol. Biol. Cell</i> <b>21</b>, 2589–2597. (doi:10.1091/mbc.E09-08-0708); Ohe <i>et al.</i> 2010 <i>Mol. Biol. Cell</i> <b>21</b>, 905–913. (doi:10.1091/mbc.E09-11-0974)), whose expression is perturbed in the absence of BTG4. BTG4 controls protein expression during metaphase II arrest by forming a complex with the deadenylase and we hypothesize that this complex is recruited to the mRNA via interactions between BTG4 and poly(A)-binding proteins. The BTG4–CAF1 complex drives the shortening of the poly(A) tails of a large number of transcripts at the MI–MII transition, and this wave of deadenylation is essential for the arrest in metaphase II. These findings establish a BTG4-dependent pathway for controlling poly(A) tail length during meiosis and identify an unexpected role for mRNA deadenylation in preventing the spontaneous activation of eggs.