cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23719/1376677
title: HESI_Biocrates_TMT_2017

description: Biocrates metabolomics data for cerebrospinal fluid, serum, plasma, and urine from rats dosed with trimethyl tin at 2, 6, 10, or 14 days after treatmetn
DOI: 10.23719/1378092
title: Tables and figure datasets

description: Soil and air concentrations of asbestos in Sumas study.
DOI: 10.23719/1378461
title: Gridded Hourly PM2.5 Data for EAS case contributed by USEPA

description: This dataset contains data contributed by EPA/ORD/NERL/CED researchers to the manuscript " Assessment and economic valuation of air pollution impacts on human health over Europe and the United States as calculated by a multi-model ensemble in the framework of AQMEII3" led by Dr. Ulas Im of Aarhus University in Denmark.
DOI: 10.23719/1389572
title: Porous nitrogen-enriched carbonaceous material from marine waste: chitosan-derived layered CNX catalyst for aerial oxidation of 5-hydroxymethylfurfural (HMF) to 2,5-furandicarboxylic acid

description: Chitosan-derived, porous and layered nitrogen-enriched carbonaceous CNx catalyst (PLCNx) has been synthesized from marine waste and its use demonstrated in a metal-free heterogeneous selective oxidation of 5-hydroxymethyl-furfural (HMF) to 2,5-furandicarboxylic acid (FDCA) using aerial oxygen under mild reaction conditions.
DOI: 10.23719/1389587
title: Metabolism of Diazinon in Rainbow Trout Liver Slices version 1 Tapper A-12jq 09122017

description: Understanding biotransformation pathways in aquatic species is an integral part of ecological risk assessment with respect to the potential bioactivation of chemicals to more toxic metabolites. The long-range goal is to gain sufficient understanding of fish metabolic transformation reactions to be able to accurately predict fish xenobiotic metabolism. While some metabolism data exist, there are few fish in vivo exposure studies where metabolites have been identified and the metabolic pathways proposed. Previous biotransformation work has focused on in vitro studies which have the advantage of high throughput but may have limited metabolic capabilities, and in vivo studies which have full metabolic capacity but are low throughput. An aquatic model system with full metabolic capacity in which a large number of chemicals could be tested would be a valuable tool. The current study evaluated the ex vivo rainbow trout liver slice model, which has the advantages of high throughput as found in vitro models and non-dedifferentiated cells and cell to cell communication found in in vivo systems. The pesticide diazinon, which has been previously tested both in vitro and in vivo in a number of mammalian and aquatic species including rainbow trout, was used to evaluate the ex vivo slice model as a tool to study biotransformation pathways. While somewhat limited by the analytical chemistry method employed, results of the liver slice model, mainly that hydroxypyrimidine was the major diazinon metabolite, are in line with the results of previous rainbow trout in vivo studies. Therefore, the rainbow trout liver slice model is a useful tool for the study of metabolism in aquatic species.
DOI: 10.23719/1390061
title: U.S. Domestic Cats as Sentinels for Perfluoroalkyl Substances

description: Legacy PFC work.  Data stored in Phillip Bost’s Lab Notebook #1778; Room D286 (Lindstrom) RTP, NC EPA office.
DOI: 10.23719/1390274
title: In Vivo PK Library for IVIVE Evaluation

description: We report on new, in vivo TK experiments in rats for 26 chemicals more commonly associated with non-therapeutic and/or unintentional exposure. These chemicals, and an additional 19 chemicals from previously published in vivo rat studies, were systematically analyzed to estimate relevant TK parameters (e.g., volume of distribution, elimination rate). Our analysis created a library of TK parameters for 38 chemicals for which rat-specific in vitro HTTK data were also available.
DOI: 10.23719/1390557
title: Data in figures

description: The data resulted from bench and other studies, and were used to produce manuscript plots.
DOI: 10.23719/1390778
title: Fine-Tuning ADAS Algorithm Parameters

description: With the development of the Connected Vehicle technology that facilitates wirelessly communication among vehicles and road-side infrastructure, the Advanced Driver Assistance Systems (ADAS) can be adopted as an effective tool for accelerating traffic safety and mobility optimization at various highway facilities. To this end, the traffic management centers identify the optimal ADAS algorithm parameter set that enables the maximum improvement of the traffic safety and mobility performance, and broadcast the optimal parameter set wirelessly to individual ADAS-equipped vehicles. After adopting the optimal parameter set, the ADAS-equipped drivers become active agents in the traffic stream that work collectively and consistently to prevent traffic conflicts, lower the intensity of traffic disturbances, and suppress the development of traffic oscillations into heavy traffic jams. Successful implementation of this objective requires the analysis capability of capturing the impact of the ADAS on driving behaviors, and measuring traffic safety and mobility performance under the influence of the ADAS. To address this challenge, this research proposes a synthetic methodology that incorporates the ADAS-affected driving behavior modeling and state-of-the-art microscopic traffic flow modeling into a virtually simulated environment. Building on such an environment, the optimal ADAS algorithm parameter set is identified through an optimization programming framework to enable the maximum safety and mobility improvement. The developed methodology is tested at a freeway facility under both low and high ADAS market penetration rate scenarios. The identified optimal ADAS algorithm parameter set can be used to establish multiple traffic management strategies. These strategies form a pool of candidate plans for the traffic management team to select when they face different control objectives (e.g., safety improvement more important, mobility improvement more important, or balanced safety and mobility improvement). It is also found that the traffic system optimization becomes easier to achieve as the ADAS penetration rate becomes higher
DOI: 10.23719/1393469
title: Effects of Na and Ca on particle size; Effect of filtering on UV absorbance

description: Effects of Na and Ca on particle size; Effect of filtering on UV absorbance
DOI: 10.23719/1393857
title: Estimating Intermittent Individual Spawning Behavior via Disaggregating Group Data

description: In order to understand fish biology and reproduction it is important to know the fecundity patterns of individual fish, as frequently established by recording the output of mixed-sex groups of fish in a laboratory setting. However, for understanding individual reproductive health and modeling purposes it is important to estimate individual fecundity from group fecundity. A multi-stage method was developed that disaggregates group level data into estimates for individual-level clutch size and spawning interval distributions. The disaggregation technique was verified by combining data from fathead minnow pairs, and checking that the disaggregation method reproduced the original clutch sizes and spawning intervals.
DOI: 10.23719/1396186
title: Metabolite profiles of repeatedly sampled urine from male fathead minnows (Pimephales promelas) contain unique lipid signatures following exposure to anti-androgens

description: The purpose of this study was twofold. First, we sought to identify candidate markers of exposure to antiandrogens
by analyzing endogenous metabolite profiles in the urine of male fathead minnows (mFHM,
Pimephales promelas). Based on earlier work, we hypothesized that unidentified lipids in the urine of mFHM
were selectively responsive to exposure to androgen receptor antagonists,which is otherwise difficult to confirm
using established fish toxicity assays. A second goal was to evaluate the feasibility of non-lethally and repeatedly
sampling urine from individual mFHMs over the time course of response to a chemical exposure. Accordingly, we
exposed mFHM to the model anti-androgens vinclozolin or flutamide. Urine was collected from each fish at
48 hour intervals over the course of a 14 day exposure. Parallel experiments were conducted with mFHM exposed
to bisphenol A or control water. The frequent handling/sampling regime did not cause apparent adverse
effects on the fish. Endogenous metabolite profiling was conducted with gas chromatography–mass spectrometry
(GC–MS), which exhibited lower variation for the urinary metabolome than was found in earlier work with
nuclear magnetic resonance (NMR) spectroscopy. Specifically, for inter- and intra-individual variations, the median
spectrum-wide relative standard deviation (RSD) was 32.6% and 33.3%, respectively, for GC–MS analysis of
urine from unexposed mFHM. These results compared favorably with similar measurements of urine from other
model species, including the Sprague Dawley rat. In addition, GC–MS allowed us to identify several lipids
(e.g., certain saturated fatty acids) in mFHM urine as candidate markers of exposure to androgen receptor
antagonists.
The dataset that is uploaded here is the complete processed data from GC-MS instrument.
DOI: 10.23719/1398769
title: Data used in manuscript

description: The data was used to construct figures used in the manuscript.
DOI: 10.23719/1405325
title: Digitized Onondaga Lake Dissolved Oxygen Concentrations and Model Simulated Values using Bayesian Monte Carlo Methods

description: The dataset is lake dissolved oxygen concentrations obtained form plots published by Gelda et al. (1996) and lake reaeration model simulated values using Bayesian Monte Carlo methods (Chaudhary and Hantush, 2017). The data also includes measured (Gelda et al., 1996 and references therein) versus estimated liquid film transfer coefficient values (KL) by Chaudhary and Hantush (2017).
DOI: 10.23719/1407589
title: People and Water – IWI-HWBI

description: The dataset contains the coverages used in the analysis including such things as shp files
DOI: 10.23719/1407625
title: Datasets used in ORD-023408: A Gene Expression Biomarker Identifies Chemicals and Other Factors That Modulate Sterol Regulatory Element Binding Protein (SREBP) Highlighting Differences in Targeted Regulation of Cholesterogenic and Lipogenic Genes

description: Datasets used in ORD-023408: A Gene Expression Biomarker Identifies Chemicals and Other Factors That Modulate Sterol Regulatory Element Binding Protein (SREBP) Highlighting Differences in Targeted Regulation of Cholesterogenic and Lipogenic Genes
DOI: 10.23719/1407626
title: Datasets used in ORD-023413: Frequent Modulation of the Sterol Regulatory Element Binding Protein (SREBP) by Chemical Exposure in the Livers of Rats 

description: Datasets used in ORD-023413: Frequent Modulation of the Sterol Regulatory Element Binding Protein (SREBP) by Chemical Exposure in the Livers of Rats
DOI: 10.23719/1407642
title: Data for Harrill et al, Testing for developmental neurotoxicity using a suite of assays for key cellular events in neurodevelopment

description: This file contains the data on apoptosis, neurite outgrowth, synaptogenesis and proliferation.
DOI: 10.23719/1407645
title: Wanjugi et al 20xx Data Set (Version 1)

description: Water quality indicator, water quality parameters, and recreational parameter data set for study period.
DOI: 10.23719/1407649
title: Linking terrestrial phosphorus inputs to riverine export across the US

description: Phosphorus inputs to the landscape from fertilizer and manure inputs, P surplus and P removal by crop harvest and hydrologic export.  The input layers are now available on EPA's EnviroAtlas under Pollutants: Nutrients and specifically the layers include 1) Phosphorus application as manure and 2) Phosphorus fertilizer application.
DOI: 10.23719/1407652
title: EPA Nanorelease Dataset

description: EPA Nanorelease Dataset
DOI: 10.23719/1407657
title: State and regional sensitivity spreadsheets for bar and pie charts

description: These files represent the state and regional summaries of sensitivities to formaldehyde, acetaldehyde and ozone to various sources and compounds.
DOI: 10.23719/1407665
title: TREE BOX PERFORMANCE IN EXFILTRATING STORMWATER RUNOFF

description: This study determines the exfiltration rates in six tree boxes and analyzes their performance over time. The study site is in Louisville, KY, where we monitored the performance of six tree boxes and other stormwater control measures (SCMs).  Each tree box is 1.5 m wide, 1.5 m long, and 1.8 m deep.  Street and parking lot runoff enters tree boxes though a curb cut. A 46-cm diameter shaft was drilled at the bottom of each tree box to reach the underlying permeable soil layer.  A pressure transducer installed at the bottom of the shaft measured the water level depth and water temperature. From the water level data, the exfiltration rate of six tree boxes was calculated for 121 rain events.  For each rain event the exfiltration rate was calculated at different water levels inside the shaft. The effects of water level inside the shaft, temperature, and age on the exfiltration rate were analyzed. Exfiltration rate increased with water level and exfiltration rate in first year is significantly larger than second year. Overall in second year the decrease in geometric mean exfiltration rate was largest for moderate depth. The exfiltration rate of the tree boxes is significantly larger for warmer rain events and significantly smaller for cooler rain events. This paper highlights the use of continuous two years’ water level monitoring data to quantify the potential for local recharge via exfiltration, and the effect of different parameter on the exfiltration rate of six tree boxes.
DOI: 10.23719/1407670
title: Developmental Thyroid Hormone Insufficiency Induces Cortical Brain Malformation and Learning Impairments: A Cross-Fostering Study

description: thyroid hormone from serum of rats exposed to goitrogen. Morphometry in brain. Behavioral data
DOI: 10.23719/1407671
title: Using methods development efforts ongoing within NRMRL, NERL, and Regional labs, the concentrations of polyfluorinated chemicals

description: Concentrations of polyfluorinated chemicals in drinking water from homes
DOI: 10.23719/1407675
title: Spatial Variation of Bioturbation and Physical Mixing in Louisiana Continental Shelf Hypoxic Zone

description: Sediment chemistry and  data used to interpret sediment profiling camera images
DOI: 10.23719/1407676
title: Manitowoc R UVDOC data 2011

description: Manitowoc R UVDOC data 2011
DOI: 10.23719/1407683
title: Life Cycle Impact Assessment and Life Cycle Cost of both Legacy and Upgraded Systems

description: LCIA and LCC data for legacy and updated systems under various scenarios.
DOI: 10.23719/1407684
title: Life cycle inventory data of various unit processes in water and wastewater treatment trains and the life cycle impact assessments of different environmental performance categories.

description: LCI and LCIA for water and wastewater treatment plants.
DOI: 10.23719/1413130
title: diagnostic test results of computers after fumigation with methyl bromide or methyl iodide

description: These files contain the results of diagnostic testing (BurnIn Test and PC-Dr) of computers after fumigation with methyl bromide or methyl iodide.
DOI: 10.23719/1416745
title: Ponderosa Pine Tree Ring Stable Isotopes, Oregon

description: Carbon and oxygen isotope data from annual tree rings in Ponderosa Pine collected in Oregon.  The data was used in 
Ulrich, D. E. M., C. J. Still, J. R. Brooks, Y. Kim, and F. C. Meinzer. 2019. Investigating old-growth ponderosa pine physiology using tree-rings, δ13C, δ18O, and a process-based model. Ecology 100:e02656.
DOI: 10.23719/1419253
title: Genetic Targets of Acute Toluene Inhalation in Drosophila melanogaster: DGRP activity, overlapping human orthologs, pathway analyses, GWAS results

description: We used the Drosophila Genetics Reference Panel (DGRP), a collection of ~200 homozygous lines of fruit flies whose genomes have been sequenced. We quantified toluene-induced suppression of motor activity in 123 lines of these flies during exposure to toluene, a volatile organic compound known to induce narcosis in mammals via its effects on neuronal ion channels. We then applied genome-wide association analyses on this effect of toluene using the DGRP web portal (http://dgrp2.gnets.ncsu.edu), which identified polymorphisms in candidate genes associated with the variation in response to toluene exposure. We tested ~2 million variants and found 82 polymorphisms located in or near 66 candidate genes that were associated with phenotypic variation for sensitivity to toluene at P < 5 x 10-5, and human orthologs for 52 of these candidate Drosophila genes. None of these orthologs are known to be involved in canonical pathways for mammalian neuronal ion channels, including GABA, glutamate, dopamine, glycine, serotonin, and voltage sensitive calcium channels.
DOI: 10.23719/1364384
title: YSI multimeter data

description: A YSI Model 556 multi-parameter instrument was utilized to collect traceable temperature compensated specific conductivity (SC) readings to scale each Onset in-river sonde using manufacturer provided HOBOware® Conductivity Assistant software. The YSI instrument was calibrated each morning using YSI-3161 1000 μS cm−1 standard solution, checked again each night, and checked weekly using YSI-3165 100,000 μS cm−1 standard solution.
Daily calibration check precision (n = 42) was 98 ± 2% (mean ± standard deviation), and the weekly high range linearity check precision (n = 9) was 95 ± 4%.
DOI: 10.23719/1374981
title: Performance Evaluation and Community Application of Low-Cost Sensors for Ozone and Nitrogen Dioxide Data Set

description: Data set contains data collected during the DISCOVER-AQ Mission that support the journal article results.
DOI: 10.23719/1375318
title: Ozone-Induced Vascular Contractility and Pulmonary Injury are Differentially Impacted by Diets Enriched with Coconut Oil, Fish Oil, and Olive Oil

description: This data set is broken up into 2 Excel files.  In one file are all the data pertaining to the vascular and pulmonary effects of ozone exposure in rats fed either a normal diet or diet enriched with coconut oil, fish oil, or olive oil.  The different tabs of the spreadsheet pertain to each figure or table found in the manuscript.  This file was updated on 12/7/17 to reflect changes to Figure 3 in response to reviewers comments following submission to Toxicological Sciences.  In the second file is all the data for Figure 8 pertaining to the global microRNA assessment.
DOI: 10.23719/1375329
title: Adrenergic and glucocorticoid receptor antagonists reduce ozone-induced lung injury and inflammation

description: This data set contains one Excel file. In this file are all the data pertaining to the effects of propranolol and mifepristone on ozone induced lung injury and inflammation . The different tabs of the spreadsheet pertain to each figure found in the manuscript.
DOI: 10.23719/1375628
title: Compilation of colony forming unit data for Bacillus anthracis and B. atrophaeus before and after exposure to various fogging treatments using peracetic acid or hydrogen peroxide

description: Data set contains CFU data for positive controls and test coupons for each test, for each material, and for each microorganism used.  Also included are efficacy data in terms of log reductions. It also includes data on process and environmental conditions during fogging.
DOI: 10.23719/1375934
title: GIS dataset of candidate terrestrial ecological restoration areas for the United States

description: A vector GIS dataset of candidate areas for terrestrial ecological restoration based on landscape context.  The dataset was created using NLCD 2011 (www.mrlc.gov) and morphological spatial pattern analysis (MSPA) (http://forest.jrc.ec.europa.eu/download/software/guidos/mspa/).  There are 13 attributes for the polygons in the dataset, including presence and length of roads, candidate area size, size of surround contiguous natural areas, soil productivity, presence and length of road, areas suitable for wetland restoration, and others.
DOI: 10.23719/1376692
title: Coliphage and adenovirus concentrations at various points along the net-zero system

description: Coliphage and adenovirus concentrations per liter
DOI: 10.23719/1377039
title: In situ analyses of Ag speciation in tissues of cucumber and wheat using synchrotron-based X-ray absorption spectroscopy

description: In situ analyses of Ag speciation in tissues of cucumber and wheat using synchrotron-based X-ray absorption spectroscopy showing spectral fitting and linear combination fitting results.
DOI: 10.23719/1378947
title: Flow and Rainfall Data used for SHC Headwatershed SWMM Calibration

description: Flow and rainfall data collected at the Shayler Crossing (SHC) stream monitoring station at 10 minute intervals over a two month period in 2009
DOI: 10.23719/1393896
title: Alderisio_Meri_vs_ES_MS_vs_MSD

description: Stain Comparison Meri vs. ES
DOI: 10.23719/1394789
title: data for aromatase 3D qsar modeling

description: computational chemistry data (very complex; need to be an expert to understand and use
DOI: 10.23719/1395252
title: Human Exposure Factors dataset

description: This dataset consists of the data used to create the tables and figures for this paper.
DOI: 10.23719/1400392
title: Barrierless Reactions with Loose Transition States Govern the Yields and Lifetimes of Organic Nitrates Derived from Isoprene

description: The attached extensive computational chemistry dataset was succinctly presented by Piletic et al. (Journal of Physical Chemistry A, 2017, DOI: 10.1021/acs.jpca.7b08229) and involves detailed electronic structure (density functional theory - DFT) and kinetic calculation (master equation formalism) outputs for the reactions of isoprene peroxy radical isomers with NOx.  The first three tabs describe the potential energy surfaces (PESs) of the beta and delta hydroxy-peroxy isoprene isomers reacting with NO to produce NO2, HONO and organic nitrates.  Microcanonical rate constants and organic nitrate yield data are presented in the fourth and fifth tabs.  The PESs for the reactions of the E and Z delta hydroxy-peroxy isoprene isomers is given in the sixth tab while the seventh tab shows the PES data for the reaction of the hydroxyl radical with several organic nitrates.
DOI: 10.23719/1407596
title: Experimental data obtained by the characterization and leaching of industrially lead contaminated soil projected to the stored in a repository.

description: The data set contains the elemental composition, pH, and surface area, TOC, IC and bulk density of the soils to be deposited in a repository. Additionally, contains the leaching results of the TCLP, SPLP, and a Controlled Acidity Leaching Protocol and the results of the sequential extraction performed with such soils.
DOI: 10.23719/1407607
title: Role of TRPA1 in acrolein cardiac effects in mice

description: Cardiac and ventilatory physiological data for mice exposed to acrolein
DOI: 10.23719/1407616
title: Snohomish Estuary nutrient enhanced coastal acidification pH time series and grab samples

description: High-resolution (15-minute frequency) monitoring of pH, dissolved oxygen, salinity, temperature, depth, and chlorophyll was conducted from July 15-October 1, 2015 in a shallow, subtidal seagrass bed in Puget Sound, WA, USA.  Grab samples for instrument validation and carbonate chemistry analysis were periodically taken next to the in-situ instrumentation.
DOI: 10.23719/1407631
title: Chlorine and DBP formation experimental data and kinetic modeling analysis to derive chlorine decay and DBP formation kinetic constants under different pipe flow conditions

description: Experimental and modeling datasets and results