cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14275035
title: Somatic embryogenesis as an alternative for in vitro multiplication of Butia odorata from mature zygotic embryos

description: Abstract Butia odorata is a palm native to southern Brazil and Uruguay, not domesticated, much appreciated for its fruits and economic potential. However, the extractivism and the difficulty of propagation have led to the decline of natural populations. The objective of this work was to prove the possibility of induction of somatic embryogenesis in B. odorata. Mature zygotic embryos were induced in two media, MS and Y3, combined with auxin 2,4-D and picloram in five concentrations (2,4-D: 0, 361.99, 452.49, 542.99 and 633.48 μM/L, picloram: 0, 50, 150, 300 and 450 μM/L). The results promising during induction with the formation of embryogenic calli and somatic embryos, however the regeneration of them was not efficient, this may be due to the occurrence of somatic embryos fused during its development. The roots were formed, but the aerial part remained molten, not completing its development. Auxin picloram and Y3 medium provided the most adequate conditions for calogenesis, formation of embryogenic callus and somatic embryos, with concentrations of 150, 300 and 450 μM/L. This is the first description of somatic embryogenesis in B. odorata that will serve as the basis for future research and adjustments of the methodology proposed here.
DOI: 10.6084/m9.figshare.14275025
title: Isolation and selection of endophytic spore-forming bacteria with plant growth promoting properties isolated from Ilex paraguariensis St. Hil. (yerba mate)

description: Abstract Yerba mate (Ilex paraguariensis St. Hil.) is a species native to the subtropical regions of South America. Despite being an important crop for the region, there are few studies on the use of microorganisms to improve the growth of seedlings in the nursery stage. The objective of this study was to isolate spore-forming endophytic bacteria with plant growth promoting properties associated with yerba mate seedlings and determine their phytobeneficial effect under controlled laboratory conditions. Isolates were selected based on their sporulation capacity and evaluated for in vitro plant growth promoting properties (nitrogen fixation, phosphate solubilization, production of siderophores and synthesis of indolic compounds). Yerba mate seedlings were inoculated with the most promising isolates, which were identified via analyses of the sequence of their 16S rDNA gene as Bacillus circulans (12RS3) and Bacillus altitudinis (19RS3, T5S-T4). After 120 days plants showed higher root dry weight when inoculated with isolate 19RS3 and higher shoot dry weight with 19RS3 and T5S-T4. In conclusion, further studies to determine the ability of these isolates to adapt to the climatic conditions and to survive amidst the native soil microflora in yerba mate cultivated native soils, will be crucial for developing such strains as biofertilizer.
DOI: 10.6084/m9.figshare.14275032.v1
title: Protein, Phytate and Minerals in Grains of Commercial Cowpea Genotypes

description: Abstract The objective of this study was to investigate and characterize cowpea (Vigna unguiculata) genotypes for total grain protein content, storage protein fractions (globulin, albumin, prolamin, basic and acid glutelins), and phytate and minerals contents. Eighteen cowpea genotypes were selected. Total grain protein content varied from 21.4% to 29.2%, for BRS Marataoã and Paulistinha genotypes, respectively. The variation in the concentration of each protein fraction was significant (P&lt;0.05) only for glutelins (basic and acid). The genotypes studied exhibited great similarity in the PAGE electrophoretic profile of the grain protein fractions and also in the mineral content. BRS Paraguaçu genotype exhibited higher Zn content than thegenotypes that have been previously recommended for this characteristic. The lowest phytate grain content was observed in four of the 18 genotypes studied, which also exhibited high protein contents. Although the results did not converge to the selection of a few genotypes, some specific differences were detected that which may be further explored. Considering total grain protein, mineral and phytate contents, the genotype Paulistinha revealed a better balance unveiling high grain total protein content, low grain phytate content and more homogeneous mineral composition.
DOI: 10.6084/m9.figshare.14275038
title: Dietary supplementation with hydrolyzed yeast and its effect on the performance, intestinal microbiota, and immune response of weaned piglets

description: Abstract The objective of this study was to evaluate the effects of autolyzed yeast on performance, cecal microbiota, and leukogram of weaned piglets. A total of 96 piglets of commercial line weaned at 21-day-old were used. The experimental design was a randomized block design with four treatments (diets containing 0.0%, 0.3%, 0.6%, and 0.9% autolyzed yeast), eight replicates, and three animals per pen in order to evaluate daily weight gain, daily feed intake, and feed conversion in periods of 0 to 15, 0 to 26, and 0 to 36 days. Quadratic effects of autolyzed yeast inclusion were observed on the feed conversion from 0 to 15 days, on daily weight gain from 0 to 15 days, 0 to 26 days and, 0 to 36 days, indicating an autolyzed yeast optimal inclusion level between 0.4% and 0.5%. No effect from autolyzed yeast addition was observed on piglet daily feed intake, cecal microbiota, and leukogram; however, i.m. application of E. coli lipopolysaccharide reduced the values of total leukocytes and their fractions (neutrophils, eosinophils, lymphocytes, monocytes, and rods). Therefore, autolyzed yeast when provided at levels between 0.4% and 0.5% improved weaned piglets’ performance.
DOI: 10.6084/m9.figshare.14275025.v1
title: Isolation and selection of endophytic spore-forming bacteria with plant growth promoting properties isolated from Ilex paraguariensis St. Hil. (yerba mate)

description: Abstract Yerba mate (Ilex paraguariensis St. Hil.) is a species native to the subtropical regions of South America. Despite being an important crop for the region, there are few studies on the use of microorganisms to improve the growth of seedlings in the nursery stage. The objective of this study was to isolate spore-forming endophytic bacteria with plant growth promoting properties associated with yerba mate seedlings and determine their phytobeneficial effect under controlled laboratory conditions. Isolates were selected based on their sporulation capacity and evaluated for in vitro plant growth promoting properties (nitrogen fixation, phosphate solubilization, production of siderophores and synthesis of indolic compounds). Yerba mate seedlings were inoculated with the most promising isolates, which were identified via analyses of the sequence of their 16S rDNA gene as Bacillus circulans (12RS3) and Bacillus altitudinis (19RS3, T5S-T4). After 120 days plants showed higher root dry weight when inoculated with isolate 19RS3 and higher shoot dry weight with 19RS3 and T5S-T4. In conclusion, further studies to determine the ability of these isolates to adapt to the climatic conditions and to survive amidst the native soil microflora in yerba mate cultivated native soils, will be crucial for developing such strains as biofertilizer.
DOI: 10.6084/m9.figshare.14275028.v1
title: Production costs in the log processing of Eucalyptus spp. wood

description: Abstract The objective of this study was to evaluate the production costs of processing logs from Eucalyptus grandis Hill ex Maiden and Eucalyptus saligna Sm, using two sawing pattern in a medium-sized sawmill. Alternating tangential sawing pattern was used for logs with a mean diameter of 33.0 cm and the radial sawing pattern for logs with a mean diameter of 47.0 cm. Based on the data obtained in the different sawing pattern, the fixed, variable and total costs were calculated and, subsequently, the average value for each of these costs. For the alternating tangential sawing pattern, the fixed cost represented 19.32% and the variable cost 80.68%. For the radial sawing pattern, the fixed cost represented 18.92% and the variable cost 81.08%. The radial sawing pattern presented lower average production costs, with a difference of 22.89 R$/m³, however there is no significant difference between the sawing pattern.
DOI: 10.6084/m9.figshare.14275044
title: Diagrammatic scale for quantifying severity of brown leaf spot on Carya illinoinensis

description: Abstract Brown leaf spot disease, caused by the fungus Ragnhildiana diffusa, is responsible for losses in pecan orchards and quantification is essential in order to conduct epidemiological studies to establish levels of productivity losses, and assess control strategies. Therefore, the aim of this study was to develop and validate a diagrammatic scale for assessing the severity of brown leaf spot in pecan. 240 symptomatic leaflets were collected from adult trees in Anta Gorda, in the Brazilian state of Rio Grande do Sul, and used to assess the current percentage severity of the disease. The scale was based on the minimum and maximum observed severity of the disease, with six graduations defined according to the Weber-Fechner Visual Stimulus Law. The scale therefore consisted of eight levels (1.5, 4.6, 10.6, 17.3, 39.5, 65.1, 77.5, and 98%). The estimates of eight evaluators provided a basis for validating the scale. They made estimates of disease severity on 40 symptomatic digitalized pecan leaflets first, without using the scale and then referring to it. The scale provided greater precision, accuracy, and reproducibility of estimates and should result in more reliable epidemiological studies.
DOI: 10.6084/m9.figshare.14275035.v1
title: Somatic embryogenesis as an alternative for in vitro multiplication of Butia odorata from mature zygotic embryos

description: Abstract Butia odorata is a palm native to southern Brazil and Uruguay, not domesticated, much appreciated for its fruits and economic potential. However, the extractivism and the difficulty of propagation have led to the decline of natural populations. The objective of this work was to prove the possibility of induction of somatic embryogenesis in B. odorata. Mature zygotic embryos were induced in two media, MS and Y3, combined with auxin 2,4-D and picloram in five concentrations (2,4-D: 0, 361.99, 452.49, 542.99 and 633.48 μM/L, picloram: 0, 50, 150, 300 and 450 μM/L). The results promising during induction with the formation of embryogenic calli and somatic embryos, however the regeneration of them was not efficient, this may be due to the occurrence of somatic embryos fused during its development. The roots were formed, but the aerial part remained molten, not completing its development. Auxin picloram and Y3 medium provided the most adequate conditions for calogenesis, formation of embryogenic callus and somatic embryos, with concentrations of 150, 300 and 450 μM/L. This is the first description of somatic embryogenesis in B. odorata that will serve as the basis for future research and adjustments of the methodology proposed here.
DOI: 10.6084/m9.figshare.14275041
title: High-throughput phenotyping of brachiaria grass seeds using free access tool for analyzing X-ray images

description: Abstract New approaches based on image analysis can assist in phenotyping of biological characteristics, serving as support for decision-making in modern agribusiness. The aim of this study was to propose a method of high-throughput phenotyping of free access for processing of 2D X-ray images of brachiaria grass (Brachiaria ruziziensis cv. Ruziziensis) seeds, as well as correlate the parameters linked to the physiological potential of the seeds. The study was carried out by means of automated analysis of X-ray images of seeds in which a macro, called PhenoXray, was developed, responsible for digital image processing, for which a series of descriptors were obtained. After the X-ray analysis, a germination test was performed on the seeds and, from this, variables related to the physiological quality of the seeds were obtained. The use of the macro PhenoXray allowed large-scale phenotyping of seed X-rays in a simple, rapid, robust, and totally free manner. This study confirmed that the methodology is efficient for obtaining morphometric data and tissue integrity data in Brachiaria ruziziensis seeds and that parameters such as relative density, integrated density, and seed filling are closely related to the physiological attributes of seed quality.
DOI: 10.6084/m9.figshare.14275041.v1
title: High-throughput phenotyping of brachiaria grass seeds using free access tool for analyzing X-ray images

description: Abstract New approaches based on image analysis can assist in phenotyping of biological characteristics, serving as support for decision-making in modern agribusiness. The aim of this study was to propose a method of high-throughput phenotyping of free access for processing of 2D X-ray images of brachiaria grass (Brachiaria ruziziensis cv. Ruziziensis) seeds, as well as correlate the parameters linked to the physiological potential of the seeds. The study was carried out by means of automated analysis of X-ray images of seeds in which a macro, called PhenoXray, was developed, responsible for digital image processing, for which a series of descriptors were obtained. After the X-ray analysis, a germination test was performed on the seeds and, from this, variables related to the physiological quality of the seeds were obtained. The use of the macro PhenoXray allowed large-scale phenotyping of seed X-rays in a simple, rapid, robust, and totally free manner. This study confirmed that the methodology is efficient for obtaining morphometric data and tissue integrity data in Brachiaria ruziziensis seeds and that parameters such as relative density, integrated density, and seed filling are closely related to the physiological attributes of seed quality.
DOI: 10.6084/m9.figshare.14275046
title: Integrated control of target spot and yield of cotton in the Brazilian cerrado biome

description: Abstract Target spot is a disease that has caused serious damage to cotton crops. This study was carried out to examine if different cotton genotypes, plant heights and fungicide treatments can be used as tools of an integrated control methods of target spot. The experiment was carried out in the 2014/15 crop season, in cerrado biome of Chapadão do Sul - MS, Brazil. It was used a randomized block design in a 2 × 3 × 3 factorial arrangement with four replicates. The factors were two plant heights (1 and 1.5 m), three cultivars (FMT 701, FM 975, and FM 944), and three fungicide treatments (control, FT1, and FT2). Fungicide treatments consisted of sequential applications of different fungicides of the triazole, strobilurin, and carboxamide groups. Cultivar FM 944 showed lower susceptibility to target spot. The shorter plants exhibited lower disease severity. The fungicides pyraclostrobin + fluxapyroxad and trifloxystrobin + prothioconazole reduced the severity of target spot. Cultivar FM 975 had the highest yield. A higher yield was obtained in the upper stratum than in the lower stratum of the plant.
DOI: 10.6084/m9.figshare.14275046.v1
title: Integrated control of target spot and yield of cotton in the Brazilian cerrado biome

description: Abstract Target spot is a disease that has caused serious damage to cotton crops. This study was carried out to examine if different cotton genotypes, plant heights and fungicide treatments can be used as tools of an integrated control methods of target spot. The experiment was carried out in the 2014/15 crop season, in cerrado biome of Chapadão do Sul - MS, Brazil. It was used a randomized block design in a 2 × 3 × 3 factorial arrangement with four replicates. The factors were two plant heights (1 and 1.5 m), three cultivars (FMT 701, FM 975, and FM 944), and three fungicide treatments (control, FT1, and FT2). Fungicide treatments consisted of sequential applications of different fungicides of the triazole, strobilurin, and carboxamide groups. Cultivar FM 944 showed lower susceptibility to target spot. The shorter plants exhibited lower disease severity. The fungicides pyraclostrobin + fluxapyroxad and trifloxystrobin + prothioconazole reduced the severity of target spot. Cultivar FM 975 had the highest yield. A higher yield was obtained in the upper stratum than in the lower stratum of the plant.
DOI: 10.6084/m9.figshare.14275038.v1
title: Dietary supplementation with hydrolyzed yeast and its effect on the performance, intestinal microbiota, and immune response of weaned piglets

description: Abstract The objective of this study was to evaluate the effects of autolyzed yeast on performance, cecal microbiota, and leukogram of weaned piglets. A total of 96 piglets of commercial line weaned at 21-day-old were used. The experimental design was a randomized block design with four treatments (diets containing 0.0%, 0.3%, 0.6%, and 0.9% autolyzed yeast), eight replicates, and three animals per pen in order to evaluate daily weight gain, daily feed intake, and feed conversion in periods of 0 to 15, 0 to 26, and 0 to 36 days. Quadratic effects of autolyzed yeast inclusion were observed on the feed conversion from 0 to 15 days, on daily weight gain from 0 to 15 days, 0 to 26 days and, 0 to 36 days, indicating an autolyzed yeast optimal inclusion level between 0.4% and 0.5%. No effect from autolyzed yeast addition was observed on piglet daily feed intake, cecal microbiota, and leukogram; however, i.m. application of E. coli lipopolysaccharide reduced the values of total leukocytes and their fractions (neutrophils, eosinophils, lymphocytes, monocytes, and rods). Therefore, autolyzed yeast when provided at levels between 0.4% and 0.5% improved weaned piglets’ performance.
DOI: 10.6084/m9.figshare.14275044.v1
title: Diagrammatic scale for quantifying severity of brown leaf spot on Carya illinoinensis

description: Abstract Brown leaf spot disease, caused by the fungus Ragnhildiana diffusa, is responsible for losses in pecan orchards and quantification is essential in order to conduct epidemiological studies to establish levels of productivity losses, and assess control strategies. Therefore, the aim of this study was to develop and validate a diagrammatic scale for assessing the severity of brown leaf spot in pecan. 240 symptomatic leaflets were collected from adult trees in Anta Gorda, in the Brazilian state of Rio Grande do Sul, and used to assess the current percentage severity of the disease. The scale was based on the minimum and maximum observed severity of the disease, with six graduations defined according to the Weber-Fechner Visual Stimulus Law. The scale therefore consisted of eight levels (1.5, 4.6, 10.6, 17.3, 39.5, 65.1, 77.5, and 98%). The estimates of eight evaluators provided a basis for validating the scale. They made estimates of disease severity on 40 symptomatic digitalized pecan leaflets first, without using the scale and then referring to it. The scale provided greater precision, accuracy, and reproducibility of estimates and should result in more reliable epidemiological studies.
DOI: 10.6084/m9.figshare.14275047
title: Performance, metabolic efficiency and egg quality in Japanese quails fed with acidulated soybean soapstock and lecithin for a prolonged period

description: Abstract This study aimed to evaluate the use of acidulated soybean soapstock in association with lecithin on productive performance, metabolic efficiency in the utilization of nutrientes, and the egg quality of Japanese quails. A total of 192 quails were used, distributed randomly in a 2×2×2 factorial scheme that included two types of oils, two levels of supplementation (4% and 8%) and two levels of lecithin (1% or 0%). At the end of the six-month experimental period, some double significant interactions were shown between the level of oil and lecithin for the performance variables (egg weight p=0.04, feed intake p&lt;0.01 and feed conversion rate p=0.04). The feed conversion rate also was influenced by a double significant interaction between the type of oil and the level of oil (p&lt;0.01). The nutrient digestibility showed that different interactions affected the results. The evaluation of egg quality, was verified that the use of acidulated soybean soapstock did not affect most variables of internal quality. The results showed that it is possible to use 8% acidulated soybean soapstock in combination with 1% lecithin in the diets of Japanese quails for a period of up to six months without a reduction in performance.
DOI: 10.6084/m9.figshare.14275049
title: Structural soil quality related to microbiological parameters in sugarcane

description: Abstract Sugarcane crop conventional tillage has been replaced by deep soil preparation with few studies about its effect on soil quality and sustainability. The aim of this study was to assess structural volumes ina dystrophic Red-Yellow Latosol subjected to conventional tillage (CT) and deep localized soil tillage (DLST) to verify how the microbiological parameters were affected. The study was conducted in a soil derived from the Caiuá Sandstone formation in Brazil. Four trenches were dug for each soil tillage system to describe the cultural profile and evaluate carbon microbial biomass (CMB) and nitrogen (NMB), basal respiration (BR), and metabolic quotient (qCO2). CT profiles exhibited a predominance of cracked soil volumes, medium-sized and large compact clods with some porosity, and continuous volumes with no cracks and of intermediate porosity. DLST profiles were predominantly free-soil volume with no cohesion and porous in appearance, and compact, cohesive volumes with no porosity visible. The highest levels of CMB and NMB were in the cracked soil under CT. Higher microbial activity indicated by BR and qCO2 were in the free powdery soil under DLST. Soil pulverization caused by DLST could cause serious consequences on soil functionality, boosting erosion, and metabolic stress in the microbiota.
DOI: 10.6084/m9.figshare.14275052.v1
title: Seeding rate in soybean according to the soil apparent electrical conductivity

description: Abstract This work aimed to study different seeding rates in soybean, at management zones determined by the mapping of the soil apparent electrical conductivity (ECa) and its relationships with plant phenology and grain yield (GY). The experiment consisted of a completely randomized design, with six replications. The plant population ranged between 311,000, 360,000, and 422,000 plants ha-1, and the fixed population (360,000 plants ha-1). The management zone with the least yield potential, received the highest seed population. The management zone with the highest plant vigor potential, received the lowest seed population. The variables plant height, Normalized Difference Vegetation Index (NDVI) at 50, 66, and 92 days after emergence (DAE), one hundred-grain weight, and GY were analyzed. ECa maps can be used to decide the seed population of the soybean. The decision strategy of increasing 20% of the seed soybean population on the smaller ECa map zones, and decreasing 20% seed population on higher ECa zones was effective and resulted in similar GY, even with the negative pressure of the high resistance of penetration (RP) values in some zones. GY map variability was influenced by ECa 0-0.2 m, by NDVI at 92 DAE and by RP 0.4-0.6 m soil layer.