cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1149956
title: Zachary's karate club

description: The file karate.gml contains the network of friendships between the 34<br>members of a karate club at a US university, as described by Wayne Zachary<br>in 1977. If you use these data in your work, please cite W. W. Zachary, An<br>information flow model for conflict and fission in small groups, Journal of<br>Anthropological Research 33, 452-473 (1977).
DOI: 10.6084/m9.figshare.1149957
title: email communication network

description: This is the email communication network at the University Rovira i Virgili<br>in Tarragona in the south of Catalonia in Spain. Nodes are users and each<br>edge represents that at least one email was sent. The direction of emails<br>or the number of emails are not stored.Please cite Roger Guimerà, Leon Danon,<br>Albert Díaz-Guilera, Francesc Giralt, and Alex Arenas. Self-similar community<br>structure in a network of human interactions. Phys. Rev. E, 68(6):065103, 2003.
DOI: 10.6084/m9.figshare.1149959
title: School network

description: This work uses data from Add Health, a program project designed by<br>Udry,Richard J. Bearman, Peter S. & Harris, Kathleen Mullan, and funded by a<br>grant P01-HD31921 from the National Institute of Child Health and Human<br>Development, with cooperative funding from 17 other agencies. Special<br>acknowledgment is due Ronald R. Rindfuss and Barbara Entwisle for assistance<br>in the original design. Persons interested in obtaining data files from Add<br>Health should contact Add Health, Carolina Population Center, 123 W. Franklin<br>Street, Chapel Hill, NC 27516–2524 (addhealth@unc.edu).
DOI: 10.6084/m9.figshare.1149960.v1
title: GN network

description: This is GN benchmarks created by Zhang zhongyuan. If you use the codes, please make reference to: Zhong-Yuan Zhang, Yong Wang, and Yong-Yeol Ahn. "Overlapping Community Detection in Complex Networks using Symmetric Binary Matrix Factorization." arXiv preprint arXiv:1303.5855 (2013).
DOI: 10.6084/m9.figshare.1149955
title: Dolphin social network

description: The file dolphins.gml contains an undirected social network of frequent<br>associations between 62 dolphins in a community living off Doubtful Sound,<br>New Zealand, as compiled by Lusseau et al. (2003). Please cite D. Lusseau, K. Schneider, O. J. Boisseau, P. Haase, E. Slooten, and<br>S. M. Dawson, The bottlenose dolphin community of Doubtful Sound features<br>a large proportion of long-lasting associations, Behavioral Ecology and<br>Sociobiology 54, 396-405 (2003). Additional information on the network can be found in D. Lusseau, The emergent properties of a dolphin social network,<br>Proc. R. Soc. London B (suppl.) 270, S186-S188 (2003). D. Lusseau, Evidence for social role in a dolphin social network,<br>Preprint q-bio/0607048 (http://arxiv.org/abs/q-bio.PE/0607048)
DOI: 10.6084/m9.figshare.1149959.v1
title: School network

description: This work uses data from Add Health, a program project designed by<br>Udry,Richard J. Bearman, Peter S. & Harris, Kathleen Mullan, and funded by a<br>grant P01-HD31921 from the National Institute of Child Health and Human<br>Development, with cooperative funding from 17 other agencies. Special<br>acknowledgment is due Ronald R. Rindfuss and Barbara Entwisle for assistance<br>in the original design. Persons interested in obtaining data files from Add<br>Health should contact Add Health, Carolina Population Center, 123 W. Franklin<br>Street, Chapel Hill, NC 27516–2524 (addhealth@unc.edu).
DOI: 10.6084/m9.figshare.1149951
title: adjacency network of common adjectives and nouns in the novel David Copperfield by Charles Dickens

description: The file adjnoun.gml contains the network of common adjective and noun<br>adjacencies for the novel "David Copperfield" by Charles Dickens, as<br>described by M. Newman. Nodes represent the most commonly occurring<br>adjectives and nouns in the book. Node values are 0 for adjectives and 1<br>for nouns. Edges connect any pair of words that occur in adjacent position<br>in the text of the book. Please cite M. E. J. Newman, Finding community<br>structure in networks using the eigenvectors of matrices, Preprint<br>physics/0605087 (2006).
DOI: 10.6084/m9.figshare.1149952
title: A network of books about US politics published around the time of the 2004 presidential election and sold by the online bookseller Amazon.com

description: Books about US politics<br>Compiled by Valdis Krebs Nodes represent books about US politics sold by the online bookseller<br>Amazon.com. Edges represent frequent co-purchasing of books by the same<br>buyers, as indicated by the "customers who bought this book also bought<br>these other books" feature on Amazon. Nodes have been given values "l", "n", or "c" to indicate whether they are<br>"liberal", "neutral", or "conservative". These alignments were assigned<br>separately by Mark Newman based on a reading of the descriptions and<br>reviews of the books posted on Amazon. These data should be cited as V. Krebs, unpublished,<br>http://www.orgnet.com/.
DOI: 10.6084/m9.figshare.1149954
title: A directed network of hyperlinks between weblogs on US politics, recorded in 2005 by Adamic and Glance.

description: Political blogosphere Feb. 2005<br>Data compiled by Lada Adamic and Natalie Glance Node "value" attributes indicate political leaning according to: 0 (left or liberal)<br>1 (right or conservative) Data on political leaning comes from blog directories as indicated. Some<br>blogs were labeled manually, based on incoming and outgoing links and posts<br>around the time of the 2004 presidential election. Directory-derived<br>labels are prone to error; manual labels even more so. Links between blogs were automatically extracted from a crawl of the front<br>page of the blog. These data should be cited as Lada A. Adamic and Natalie Glance, "The<br>political blogosphere and the 2004 US Election", in Proceedings of the<br>WWW-2005 Workshop on the Weblogging Ecosystem (2005).
DOI: 10.6084/m9.figshare.1149953
title: network of American football games between Division IA colleges during regular season Fall 2000

description: The file football.gml contains the network of American football games<br>between Division IA colleges during regular season Fall 2000, as compiled<br>by M. Girvan and M. Newman. The nodes have values that indicate to which<br>conferences they belong. The values are as follows: 0 = Atlantic Coast<br>1 = Big East<br>2 = Big Ten<br>3 = Big Twelve<br>4 = Conference USA<br>5 = Independents<br>6 = Mid-American<br>7 = Mountain West<br>8 = Pacific Ten<br>9 = Southeastern<br>10 = Sun Belt<br>11 = Western Athletic If you make use of these data, please cite M. Girvan and M. E. J. Newman,<br>Community structure in social and biological networks,<br>Proc. Natl. Acad. Sci. USA 99, 7821-7826 (2002).
DOI: 10.6084/m9.figshare.1149925
title: Fields Studying Argumentation (2010-09-15)

description: A mindmap of the fields studying argumentation.
DOI: 10.6084/m9.figshare.1149950
title: coauthorship network of scientists working on network theory and experiment

description: The file netscience.gml contains a coauthorship network of scientists<br>working on network theory and experiment, as compiled by M. Newman in May<br>2006. The network was compiled from the bibliographies of two review<br>articles on networks, M. E. J. Newman, SIAM Review 45, 167-256 (2003) and<br>S. Boccaletti et al., Physics Reports 424, 175-308 (2006), with a few<br>additional references added by hand. The version given here contains all<br>components of the network, for a total of 1589 scientists, and not just the<br>largest component of 379 scientists previously published. The network is<br>weighted, with weights assigned as described in M. E. J. Newman,<br>Phys. Rev. E 64, 016132 (2001). If you make use of these data, please cite M. E. J. Newman, Finding<br>community structure in networks using the eigenvectors of matrices,<br>Preprint physics/0605087 (2006).
DOI: 10.6084/m9.figshare.1149925.v1
title: Fields Studying Argumentation (2010-09-15)

description: A mindmap of the fields studying argumentation.
DOI: 10.6084/m9.figshare.1149852
title: Dataset

description: Dataset Buechner et al.
DOI: 10.6084/m9.figshare.1149852.v1
title: Dataset

description: Dataset Buechner et al.
DOI: 10.6084/m9.figshare.1148974
title: Non invasive method for early detection of disease using though fractal plotting of the eye

description: Non invasive method for early detection of disease using though fractal plotting of the eye
DOI: 10.6084/m9.figshare.1148967
title: Incentivizing the public to support invasive species management: Eurasian milfoil reduces lakefront property values

description: Olden, J.D. and M. Tamayo. 2014. Incentivizing the public to support invasive species management: Eurasian milfoil reduces lakefront property values. PLoS One 9(10): e110458.<br> PLEASE email J. Olden (olden@uw.edu) if you use this data in your research.
DOI: 10.6084/m9.figshare.1148968
title: Eye plotting for Fractile understanding of human's

description: Eye plotting for Fractile understanding of human's and understanding the overlapping biology and math. Decoding entropy, gravity, and conciousness
DOI: 10.6084/m9.figshare.1148968.v1
title: Eye plotting for Fractile understanding of human's

description: Eye plotting for Fractile understanding of human's and understanding the overlapping biology and math. Decoding entropy, gravity, and conciousness
DOI: 10.6084/m9.figshare.1148967.v1
title: Incentivizing the public to support invasive species management: Eurasian milfoil reduces lakefront property values

description: Olden, J.D. and M. Tamayo. In press. Incentivizing the public to support invasive species management: Eurasian milfoil reduces lakefront property values. PLoS One. PLEASE email J. Olden (olden@uw.edu) if you use this data in your research.
DOI: 10.6084/m9.figshare.1148960
title: LTSTM data from 2000

description: This is low temperature STM data from the year 2000
DOI: 10.6084/m9.figshare.1148917
title: Pharmacophore and docking-based virtual screening approach for the design of new dual inhibitors of Janus kinase 1 and Janus kinase 2

description: Janus kinase 1 and 2, non-receptor protein tyrosine kinases, are implicated in various cancerous diseases. Involvement of these two enzymes in the pathways that stimulate cell proliferation in cancerous conditions makes them potential therapeutic targets for designing new dual-targeted agents for the treatment of cancer. In the present study, two separate pharmacophore models were developed and the best models for JAK1 (AAADH.25) and JAK2 (ADRR.92) were selected on the basis of their external predictive ability. Both models were subjected to a systematic virtual screening (VS) protocol using a PHASE database of 1.5 million molecules. The hits retrieved in VS were investigated for ADME properties to avoid selection of molecules with a poor pharmacokinetic profile. The molecules considered to be within the range of acceptable limits of ADME properties were further employed for docking simulations with JAK1 and JAK2 proteins to explore the final hits that possess structural features of both pharmacophore models as well as display essential interactions with both of them. Thus, the new molecules obtained in this way should show inhibitory activity against JAK1 and JAK2 and may serve as novel therapeutic agents for the treatment of cancerous disease conditions.
DOI: 10.6084/m9.figshare.1148916
title: Fig f1 - DG PC PE PS PI species

description: Profiles of main species determined for DG, PC, PE, PS, and PI classes by UHPLC-MS in ‰ relative to total amount of respective class. Shown are species data for HFD- (n=6) and ATGL-studies (n=3) separated by a gap.
DOI: 10.6084/m9.figshare.1148916.v1
title: Fig f1 - DG PC PE PS PI species

description: Profiles of main species determined for DG, PC, PE, PS, and PI classes by UHPLC-MS in ‰ relative to total amount of respective class. Shown are species data for HFD- (n=6) and ATGL-studies (n=3) separated by a gap.
DOI: 10.6084/m9.figshare.1148917.v1
title: Pharmacophore and docking-based virtual screening approach for the design of new dual inhibitors of Janus kinase 1 and Janus kinase 2

description: Janus kinase 1 and 2, non-receptor protein tyrosine kinases, are implicated in various cancerous diseases. Involvement of these two enzymes in the pathways that stimulate cell proliferation in cancerous conditions makes them potential therapeutic targets for designing new dual-targeted agents for the treatment of cancer. In the present study, two separate pharmacophore models were developed and the best models for JAK1 (AAADH.25) and JAK2 (ADRR.92) were selected on the basis of their external predictive ability. Both models were subjected to a systematic virtual screening (VS) protocol using a PHASE database of 1.5 million molecules. The hits retrieved in VS were investigated for ADME properties to avoid selection of molecules with a poor pharmacokinetic profile. The molecules considered to be within the range of acceptable limits of ADME properties were further employed for docking simulations with JAK1 and JAK2 proteins to explore the final hits that possess structural features of both pharmacophore models as well as display essential interactions with both of them. Thus, the new molecules obtained in this way should show inhibitory activity against JAK1 and JAK2 and may serve as novel therapeutic agents for the treatment of cancerous disease conditions.
DOI: 10.6084/m9.figshare.1148917.v3
title: Pharmacophore and docking-based virtual screening approach for the design of new dual inhibitors of Janus kinase 1 and Janus kinase 2

description: Janus kinase 1 and 2, non-receptor protein tyrosine kinases, are implicated in various cancerous diseases. Involvement of these two enzymes in the pathways that stimulate cell proliferation in cancerous conditions makes them potential therapeutic targets for designing new dual-targeted agents for the treatment of cancer. In the present study, two separate pharmacophore models were developed and the best models for JAK1 (AAADH.25) and JAK2 (ADRR.92) were selected on the basis of their external predictive ability. Both models were subjected to a systematic virtual screening (VS) protocol using a PHASE database of 1.5 million molecules. The hits retrieved in VS were investigated for ADME properties to avoid selection of molecules with a poor pharmacokinetic profile. The molecules considered to be within the range of acceptable limits of ADME properties were further employed for docking simulations with JAK1 and JAK2 proteins to explore the final hits that possess structural features of both pharmacophore models as well as display essential interactions with both of them. Thus, the new molecules obtained in this way should show inhibitory activity against JAK1 and JAK2 and may serve as novel therapeutic agents for the treatment of cancerous disease conditions.
DOI: 10.6084/m9.figshare.1148913
title: Pictorial Iconicity

description: Getting the picture: Iconicity does not affect representation-referent confusion M.C. Wimmer, E.J. Robinson, L. Koenig, E. Corder PLoS ONE (in press)
DOI: 10.6084/m9.figshare.1148917.v2
title: Pharmacophore and docking-based virtual screening approach for the design of new dual inhibitors of Janus kinase 1 and Janus kinase 2

description: Janus kinase 1 and 2, non-receptor protein tyrosine kinases, are implicated in various cancerous diseases. Involvement of these two enzymes in the pathways that stimulate cell proliferation in cancerous conditions makes them potential therapeutic targets for designing new dual-targeted agents for the treatment of cancer. In the present study, two separate pharmacophore models were developed and the best models for JAK1 (AAADH.25) and JAK2 (ADRR.92) were selected on the basis of their external predictive ability. Both models were subjected to a systematic virtual screening (VS) protocol using a PHASE database of 1.5 million molecules. The hits retrieved in VS were investigated for ADME properties to avoid selection of molecules with a poor pharmacokinetic profile. The molecules considered to be within the range of acceptable limits of ADME properties were further employed for docking simulations with JAK1 and JAK2 proteins to explore the final hits that possess structural features of both pharmacophore models as well as display essential interactions with both of them. Thus, the new molecules obtained in this way should show inhibitory activity against JAK1 and JAK2 and may serve as novel therapeutic agents for the treatment of cancerous disease conditions.
DOI: 10.6084/m9.figshare.1148913.v1
title: Pictorial Iconicity

description: Getting the picture: Iconicity does not affect representation-referent confusion M.C. Wimmer, E.J. Robinson, L. Koenig, E. Corder PLoS ONE (in press)
DOI: 10.6084/m9.figshare.1148892
title: Gaussian Job Archive for C26H27ClN4O2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1148909
title: Road network selection for medium scales using an extended stroke-mesh combination algorithm

description: The road network is an essential feature class in topographic maps and databases. Road network selection for smaller scales forms a prerequisite for all other generalization operators and is thus a fundamental operation in the overall process of topographic map and database production. The objective of this paper was to develop an algorithm for automated road network selection from a large-scale (1:10,000) to a medium-scale database (1:50,000). The project was pursued in collaboration with swisstopo, the national mapping agency of Switzerland. Three algorithms (a stroke-based, a mesh-based, and a combined stroke-mesh algorithm) were implemented from the literature and analyzed using swisstopo’s large-scale TLM3D spatial database, with requirements set forth by expert cartographers. Initial experiments showed that the combination algorithm performed best, yet still it could not meet all requirements. Therefore, extensions to the basic stroke-mesh algorithm were developed, significantly improving the selection result with real-world, large test databases. Three extensions introduce modifications to the stroke-mesh combination algorithm. Furthermore, two extensions include external feature classes, ensuring accessibility of points of interest and appropriate network density representation in settlement areas, respectively. The results were evaluated by expert cartographers, who concluded that the proposed approach is ready to be deployed in production at swisstopo.
DOI: 10.6084/m9.figshare.1148909.v1
title: Road network selection for medium scales using an extended stroke-mesh combination algorithm

description: The road network is an essential feature class in topographic maps and databases. Road network selection for smaller scales forms a prerequisite for all other generalization operators and is thus a fundamental operation in the overall process of topographic map and database production. The objective of this paper was to develop an algorithm for automated road network selection from a large-scale (1:10,000) to a medium-scale database (1:50,000). The project was pursued in collaboration with swisstopo, the national mapping agency of Switzerland. Three algorithms (a stroke-based, a mesh-based, and a combined stroke-mesh algorithm) were implemented from the literature and analyzed using swisstopo’s large-scale TLM3D spatial database, with requirements set forth by expert cartographers. Initial experiments showed that the combination algorithm performed best, yet still it could not meet all requirements. Therefore, extensions to the basic stroke-mesh algorithm were developed, significantly improving the selection result with real-world, large test databases. Three extensions introduce modifications to the stroke-mesh combination algorithm. Furthermore, two extensions include external feature classes, ensuring accessibility of points of interest and appropriate network density representation in settlement areas, respectively. The results were evaluated by expert cartographers, who concluded that the proposed approach is ready to be deployed in production at swisstopo.
DOI: 10.6084/m9.figshare.1148886
title: 21st August 2014 Penmaenmawr Promenade litter survey, North Wales

description: A GPS survey of litter items along the promenade at Penmaenmawr, North Wales, including adjacent stone filled areas, between the west end of the boat club compound and the cycleway at the eastern end. The promenade has no real litter problem, so this is intended to show the types of litter found during summer on a typical seaside promenade. Note: The first columns provide time, location and litter type information. The columns to the right provide a lookup table between litter type values and their descriptions.
DOI: 10.6084/m9.figshare.1148892.v1
title: Gaussian Job Archive for C26H27ClN4O2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1148859
title: ISI web of knowledge - RE-LY

description: ISI
DOI: 10.6084/m9.figshare.1148872
title: Availability of phylogenetic data by year of publication.

description: The number of studies with available phylogenetic data---as tree files, alignments files or both procured either from online archives or by direct request---organized by year of publication (barplot). Phylogenetic data of some kind (tree and/or alignment files) were available from an online archive for approximately 25% of the studies, and additional data were successfully solicited by direct request for 42% of the studies. Complete datasets were unavailable for 60% of published studies, and data of any kind were unavailable for 33% of studies. The 'policy' arrow indicates the onset of several community initiatives to improve the sharing and preservation of evolutionary (including phylogenetic) data, which coincides with a marked increase in the deposition of phylogenetic data to online archives. For each pair of barplots, the left/right bars correspond to archived/solicited data, respectively.
DOI: 10.6084/m9.figshare.1148872.v1
title: Availability of phylogenetic data by year of publication.

description: The number of studies with available phylogenetic data---as tree files, alignments files or both procured either from online archives or by direct request---organized by year of publication (barplot). Phylogenetic data of some kind (tree and/or alignment files) were available from an online archive for approximately 25% of the studies, and additional data were successfully solicited by direct request for 42% of the studies. Complete datasets were unavailable for 60% of published studies, and data of any kind were unavailable for 33% of studies. The 'policy' arrow indicates the onset of several community initiatives to improve the sharing and preservation of evolutionary (including phylogenetic) data, which coincides with a marked increase in the deposition of phylogenetic data to online archives. For each pair of barplots, the left/right bars correspond to archived/solicited data, respectively.
DOI: 10.6084/m9.figshare.1148856
title: Embase RE-LY dabigatran - pradaxa

description: database
DOI: 10.6084/m9.figshare.1148856.v1
title: Embase RE-LY dabigatran - pradaxa

description: database
DOI: 10.6084/m9.figshare.1148859.v1
title: ISI web of knowledge - RE-LY

description: ISI
DOI: 10.6084/m9.figshare.1148851
title: PubMed database of studies matching "NCT0026260" (RE-LY, dabigatran, Pradaxa)

description: Database of PubMed matches for NCT00262600 (n=23)
DOI: 10.6084/m9.figshare.1148855
title: NCT00262600 Pradaxa dabigatran RE-LY EBSCO Discovery service

description: NCT00262600 - database of EBSCO discovery service search query. (n=61)
DOI: 10.6084/m9.figshare.1148855.v1
title: NCT00262600 Pradaxa dabigatran RE-LY EBSCO Discovery service

description: NCT00262600 - database of EBSCO discovery service search query. (n=61)
DOI: 10.6084/m9.figshare.1147469
title: Tool to assist in attaching charging cords to devices

description: Tool to assist in attaching charging cords to devices