cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26788336.v1
title: Supplementary Material for: Real-world study of systemic treatment after first-line atezolizumab plus bevacizumab for hepatocellular carcinoma in Asia-Pacific countries

description: Introduction: Atezolizumab plus bevacizumab is a commonly used first-line regimen for advanced hepatocellular carcinoma (HCC) treatment owing to its superior outcomes compared to sorafenib. However, optimal subsequent treatment options for patients with HCC who progressed on first-line atezolizumab plus bevacizumab remain unclear. 
Methods: This multinational, multi-institutional, retrospective study included patients with HCC from 22 centers in five Asia-Pacific countries who were treated with first-line atezolizumab plus bevacizumab, which was discontinued for any reason. The endpoints included progression-free survival (PFS) and overall survival (OS) according to patient characteristics and second-line regimens. 
Results: Between June 2016 and May 2023, 1141 patients were treated with first-line atezolizumab plus bevacizumab, of whom 629 (55.1%) received subsequent treatment. Sorafenib and lenvatinib were the most commonly administered second-line regimens (53.9% and 25.6%, respectively). Overall, the median PFS and OS were of 2.9 and 8.0 months, respectively. Lenvatinib had longer PFS (4.0 vs 2.3 months) and OS (8.0 vs 6.3 months) than sorafenib. Patients treated with tyrosine kinase inhibitor (TKI) plus immune checkpoint inhibitor (ICI) (n=50, 8.3%) showed PFS and OS of 5.4 and 12.6 months, respectively. Lower tumor burden and lenvatinib or TKI plus ICI use were associated with longer second-line PFS. Preserved liver function was associated with improved OS. 
Conclusions: In patients with HCC who progressed on first-line atezolizumab plus bevacizumab, sorafenib and lenvatinib were the most commonly used second-line regimens in Asia-Pacific countries, with lenvatinib resulting in longer OS than sorafenib. The second-line TKI plus ICI combination exhibited promising efficacy, suggesting the potential role of continuing ICIs beyond disease progression.
DOI: 10.57745/a2glyr
title: SpeciesTree_rooted.txt

description: Species tree reconstructed by OrthoFinder
DOI: 10.57745/hixrui
title: Duplications_per_Species_Tree_Node.tab

description: Statistics of duplications per species and per tree node
DOI: 10.57745/l1bcz6
title: SpeciesTree_rooted_node_labels.txt

description: Species tree reconstructed by OrthoFinder with labels at nodes
DOI: 10.57745/nhky1b
title: Orthogroups_for_concatenated_alignment.txt

description: Orthogroups used to produce the concatenated multiple sequence alignment and the tree
DOI: 10.57745/hi18st
title: Orthogroups.GeneCount.tab

description: Composition of orhogroups per species
DOI: 10.57745/lbgriz
title: Statistics_PerSpecies.tsv

description: Statistics of OrthoFinder per species
DOI: 10.57745/nwtxuv
title: Orthogroups.tab

description: Orthogroups in TSV format
DOI: 10.57745/rsafmu
title: Statistics_Overall.tsv

description: General Statistics of OrthoFinder
DOI: 10.15468/dl.r28g9u
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((144.762749 -36.916976, 144.762749 -36.921467, 144.764994 -36.921467, 144.764994 -36.928205, 144.769486 -36.928205, 144.769486 -36.916976, 144.762749 -36.916976))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075493-240626123714530/datasets/export for details.
DOI: 10.15468/dl.848mvf
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron malayanum Jack"
 ]
}

 The dataset includes 169 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075494-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qeygk5
title: Occurrence Download

description: A dataset containing 134 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Geometry POLYGON((71.57240 25.72183,110.42760 25.72183,110.42760 41.27817,71.57240 41.27817,71.57240 25.72183))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Fritillaria delavayi Franch., Sinochasea trigyna Keng)"
 ]
}

 The dataset includes 134 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075495-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/kmxp-ns31
title: Bibliometric 

description: The purpose of this study is to conduct a bibliometric analysis to investigate research trends, collaboration networks, and thematic evaluations of publications on the topic of ergonomic equipment for the elderly. It employs a systematic literature review using the PRISMA method to examine research trends, publication productivity, and citation impact in the selected topic. The analysis reveals a significant surge in research interest over the past decade (2013-2023), with substantial contributions from various academic journals in Scopus. Bibliometric R and VOSviewer software are used to conduct the bibliometric analysis. The study reveals a substantial increase in the volume of literature related to ergonomic equipment for the elderly. "Applied Ergonomics" leads in productivity on this topic, while China and the USA are the most productive countries. The findings indicate a transition in research trends from earlier themes such as elderly care, universal design, and ergonomic design, to general ergonomics, and finally to high technology (artificial intelligence and virtual reality). Based on the findings, we suggest that future research should prioritize the development of advanced healthcare solutions for the elderly, incorporating latest technologies. These findings serve as a valuable resource for researchers, policymakers, and practitioners, facilitating a deeper understanding of the evolving knowledge in this field.
DOI: 10.15468/dl.5v9mht
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((144.223757 -36.921467, 144.223757 -36.923713, 144.221511 -36.923713, 144.221511 -36.934942, 144.228248 -36.934942, 144.228248 -36.932696, 144.237232 -36.932696, 144.237232 -36.930451, 144.241723 -36.930451, 144.241723 -36.925959, 144.246215 -36.925959, 144.246215 -36.921467, 144.234986 -36.921467, 144.234986 -36.928205, 144.23274 -36.928205, 144.23274 -36.921467, 144.223757 -36.921467))"
 ]
}

 The dataset includes 115 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075497-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3enf5
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helianthemum citrinum Ghaz."
 ]
}

 The dataset includes 32 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075498-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.taycvb
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mozambique",
 "OccurrenceStatus is Present",
 "TaxonKey is Cuviera tomentosa Verdc."
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075499-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24467614
title: Anton Reichenow and the birds of Africa

description: The first handbook of the birds of Africa was completed in 1905 by Anton Reichenow (1847–1941). Based in the Berlin museum for almost 50 years, he described 152 African taxa that are still recognised as valid species today, and was considered by his contemporaries as a key figure in the development of African ornithology.
DOI: 10.6084/m9.figshare.24467614.v1
title: Anton Reichenow and the birds of Africa

description: The first handbook of the birds of Africa was completed in 1905 by Anton Reichenow (1847–1941). Based in the Berlin museum for almost 50 years, he described 152 African taxa that are still recognised as valid species today, and was considered by his contemporaries as a key figure in the development of African ornithology.
DOI: 10.15468/dl.rk9dw7
title: Occurrence Download

description: A dataset containing 98964 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-180 -90, 180 -90, 180 90, -180 90, -180 -90))",
 "Depth is greater than or equal to 0m",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "TaxonKey is Cheloniidae",
 "CoordinateUncertaintyInMeters is less than 1e+05"
 ]
}

 The dataset includes 98964 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075496-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xvsjn2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((144.45732 -36.921467, 144.45732 -36.928205, 144.459566 -36.928205, 144.459566 -36.921467, 144.45732 -36.921467))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075500-240626123714530/datasets/export for details.
DOI: 10.18112/openneuro.ds005418.v3.1.0
title: Cerebrovascular Reactivity Normative Dataset
DOI: 10.15468/dl.c5cngs
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.139811 -36.921467, 149.139811 -36.923713, 149.142057 -36.923713, 149.142057 -36.921467, 149.139811 -36.921467)), ((149.142057 -36.923713, 149.142057 -36.928205, 149.144302 -36.928205, 149.144302 -36.923713, 149.142057 -36.923713)))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075501-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4hy6e2
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mozambique",
 "OccurrenceStatus is Present",
 "TaxonKey is Rothmannia macrosiphon (K.Schum.) Bridson"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075503-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13347339
title: ENDGAME - Laboratory Experiment 2023-11-09 Exp. 001 - High Speed Camera data

description: Preliminary 2D Shock-tube experiments in combination with high speed Schlieren shadow photography. 

We developed a 2D shock-tube setup using 2 plexiglass sheets (30 cm x 50 cm x 1 cm) separated by 2 lateral bars (gap between plexiglass sheets 1.2 cm). We injected compressed air into the 2D setup at different overpressures (up to 8 bar). The high-pressure reservoir is connected with the 2D apparatus through a diaphragm pulse valve which allows a fast release of pressurized gas into the system. The 2D setup was either empty (i.e. with air at ambient conditions) or filled with a given amount of fluids (water or viscous fluid) or small particles. Images were collected at a frame rate of 50000 fps. The field of view of the images show the jet flow dynamics within the 2 plexiglass sheets (vent is outside the field of view). 

By using Schlieren shadow photography we can see the presence of some textures in the images, which are likely to be generated by the plexiglass sheets.
DOI: 10.5281/zenodo.13347340
title: ENDGAME - Laboratory Experiment 2023-11-09 Exp. 001 - High Speed Camera data

description: Preliminary 2D Shock-tube experiments in combination with high speed Schlieren shadow photography. 

We developed a 2D shock-tube setup using 2 plexiglass sheets (30 cm x 50 cm x 1 cm) separated by 2 lateral bars (gap between plexiglass sheets 1.2 cm). We injected compressed air into the 2D setup at different overpressures (up to 8 bar). The high-pressure reservoir is connected with the 2D apparatus through a diaphragm pulse valve which allows a fast release of pressurized gas into the system. The 2D setup was either empty (i.e. with air at ambient conditions) or filled with a given amount of fluids (water or viscous fluid) or small particles. Images were collected at a frame rate of 50000 fps. The field of view of the images show the jet flow dynamics within the 2 plexiglass sheets (vent is outside the field of view). 

By using Schlieren shadow photography we can see the presence of some textures in the images, which are likely to be generated by the plexiglass sheets.
DOI: 10.15468/dl.6hsbbv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((144.800927 -36.923713, 144.800927 -36.930451, 144.803173 -36.930451, 144.803173 -36.923713, 144.800927 -36.923713))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075508-240626123714530/datasets/export for details.
DOI: 10.15468/dl.j3nsvk
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron malipoense M.Y.He"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075509-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12597592
title: The past and future changes of river sediment in the U.S. Mid-Atlantic

description: E3SM-tanzeli-lnd-elm-erosion-v3.zip: Model code

domain_lnd_Mid-Atlantic_MPAS_c220107.nc: Mid-Atlantic mesh grid

ancillary.pk: ancillary variables including "area" (grid cell area: m^2), "areaTotal" (upstream drainage area: m^2), "DSIG" (downstream index), "GINDEX" (grid cell index), "outletG" (river basin index), and "rlen" (river channel length: m).

Baseline.pk: Baseline simulation: "Q": discharge (m^3/s), "Qs": sediment discharge (kg/s)

CLIM_noLU_noDAM.pk: CLIM_noLU_noDAM simulation

noCLIM_LU_noDAM.pk: noCLIM_LU_noDAM simulation

noCLIM_noLU_DAM.pk: noCLIM_noLU_DAM simulation

SSP585_UKESM1-0-LL.pk: SSP585_UKESM1-0-LL simulation

SSP585_MPI-ESM1-2-HR.pk: SSP585_MPI-ESM1-2-HR simulation

SSP585_GFDL-ESM4.pk: SSP585_GFDL-ESM4 simulation

SSP585_IPSL-CM6A-LR.pk: SSP585_IPSL-CM6A-LR simulation

draw_ssc_channel_vari4pub.py: Python script to plot longitudinal SSC variations

cmp_qs_icom_future4pub.py: Python script to plot future sediment discharge change
DOI: 10.5281/zenodo.12597593
title: The past and future changes of river sediment in the U.S. Mid-Atlantic

description: E3SM-tanzeli-lnd-elm-erosion-v3.zip: Model code

domain_lnd_Mid-Atlantic_MPAS_c220107.nc: Mid-Atlantic mesh grid

ancillary.pk: ancillary variables including "area" (grid cell area: m^2), "areaTotal" (upstream drainage area: m^2), "DSIG" (downstream index), "GINDEX" (grid cell index), "outletG" (river basin index), and "rlen" (river channel length: m).

Baseline.pk: Baseline simulation: "Q": discharge (m^3/s), "Qs": sediment discharge (kg/s)

CLIM_noLU_noDAM.pk: CLIM_noLU_noDAM simulation

noCLIM_LU_noDAM.pk: noCLIM_LU_noDAM simulation

noCLIM_noLU_DAM.pk: noCLIM_noLU_DAM simulation

SSP585_UKESM1-0-LL.pk: SSP585_UKESM1-0-LL simulation

SSP585_MPI-ESM1-2-HR.pk: SSP585_MPI-ESM1-2-HR simulation

SSP585_GFDL-ESM4.pk: SSP585_GFDL-ESM4 simulation

SSP585_IPSL-CM6A-LR.pk: SSP585_IPSL-CM6A-LR simulation

draw_ssc_channel_vari4pub.py: Python script to plot longitudinal SSC variations

cmp_qs_icom_future4pub.py: Python script to plot future sediment discharge change
DOI: 10.6084/m9.figshare.26787751.v1
title: Model output for "Transient overturning changes cause upper-ocean nutrient decline in a warming climate"

description: Annual-mean output from the MITgcm simulations, including Si and vVel.
DOI: 10.6084/m9.figshare.26787751
title: Model output for "Transient overturning changes cause upper-ocean nutrient decline in a warming climate"

description: Annual-mean output from the MITgcm simulations, including Si and vVel.
DOI: 10.15468/dl.wsfg9q
title: Occurrence Download

description: A dataset containing 818 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Korea, Republic of",
 "OccurrenceStatus is Present",
 "TaxonKey is Calliphora lata Coquillett, 1898"
 ]
}

 The dataset includes 818 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075510-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xypx7v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((144.398929 -36.928205, 144.398929 -36.930451, 144.401175 -36.930451, 144.401175 -36.928205, 144.398929 -36.928205))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075511-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.13347383
title: ENDGAME - Laboratory Experiment 2023-11-09 Exp. 002 - High Speed Camera data

description: Preliminary 2D Shock-tube experiments in combination with high speed Schlieren shadow photography. 

We developed a 2D shock-tube setup using 2 plexiglass sheets (30 cm x 50 cm x 1 cm) separated by 2 lateral bars (gap between plexiglass sheets 1.2 cm). We injected compressed air into the 2D setup at different overpressures (up to 8 bar). The high-pressure reservoir is connected with the 2D apparatus through a diaphragm pulse valve which allows a fast release of pressurized gas into the system. The 2D setup was either empty (i.e. with air at ambient conditions) or filled with a given amount of fluids (water or viscous fluid) or small particles. Images were collected at a frame rate of 50000 fps. The field of view of the images show the jet flow dynamics within the 2 plexiglass sheets (vent is outside the field of view). 

By using Schlieren shadow photography we can see the presence of some textures in the images, which are likely to be generated by the plexiglass sheets.
DOI: 10.5281/zenodo.13347384
title: ENDGAME - Laboratory Experiment 2023-11-09 Exp. 002 - High Speed Camera data

description: Preliminary 2D Shock-tube experiments in combination with high speed Schlieren shadow photography. 

We developed a 2D shock-tube setup using 2 plexiglass sheets (30 cm x 50 cm x 1 cm) separated by 2 lateral bars (gap between plexiglass sheets 1.2 cm). We injected compressed air into the 2D setup at different overpressures (up to 8 bar). The high-pressure reservoir is connected with the 2D apparatus through a diaphragm pulse valve which allows a fast release of pressurized gas into the system. The 2D setup was either empty (i.e. with air at ambient conditions) or filled with a given amount of fluids (water or viscous fluid) or small particles. Images were collected at a frame rate of 50000 fps. The field of view of the images show the jet flow dynamics within the 2 plexiglass sheets (vent is outside the field of view). 

By using Schlieren shadow photography we can see the presence of some textures in the images, which are likely to be generated by the plexiglass sheets.
DOI: 10.5281/zenodo.13347176
title: R codes prepared for the manuscript, entitled "The roles of Y chromosomal genes in mouse sex spectrum phenotypes"
title: R codes prepared for the manuscript

description: R codes for the manuscript, entitled "The roles of Y chromosomal genes in mouse sex spectrum phenotypes"
DOI: 10.5281/zenodo.13347177
title: R codes prepared for the manuscript, entitled "The roles of Y chromosomal genes in mouse sex spectrum phenotypes"
title: R codes prepared for the manuscript

description: R codes for the manuscript, entitled "The roles of Y chromosomal genes in mouse sex spectrum phenotypes"
DOI: 10.15468/dl.hfg3fk
title: Occurrence Download

description: A dataset containing 31095 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Canada, United States of America)",
 "TaxonKey is Lymantria dispar Linnaeus, 1758"
 ]
}

 The dataset includes 31095 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075513-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nd7cnc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.101632 -36.928205, 149.101632 -36.930451, 149.106124 -36.930451, 149.106124 -36.928205, 149.101632 -36.928205))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075514-240626123714530/datasets/export for details.
DOI: 10.15468/dl.5yhvvr
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mozambique",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Cladoceras rovumense I.Darbysh., J.E.Burrows & Q.Luke, Tarenna Gaertn.)"
 ]
}

 The dataset includes 91 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075515-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3jj8cn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((143.603916 -36.930451, 143.603916 -36.934942, 143.606162 -36.934942, 143.606162 -36.930451, 143.603916 -36.930451)), ((143.606162 -36.934942, 143.606162 -36.937188, 143.608408 -36.937188, 143.608408 -36.934942, 143.606162 -36.934942)), ((143.608408 -36.937188, 143.608408 -36.939434, 143.6129 -36.939434, 143.6129 -36.937188, 143.608408 -36.937188)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075516-240626123714530/datasets/export for details.
DOI: 10.15468/dl.63mj44
title: Occurrence Download

description: A dataset containing 118 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fritillaria delavayi Franch."
 ]
}

 The dataset includes 118 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075517-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.