cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21429201
title: Sharpe_Raw Gatun SIA Data.csv

description: Stable isotope data (carbon and nitrogen) for fish and invertebrates from Lake Gatun, Panama.
DOI: 10.5281/zenodo.8271171
title: Supplementary Material for publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin (Leontopithecus rosalia} and Marmoset Callithrix sp. Metagenomic Shotgun Pools

description: Supplementary Tables and Figure for the publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin <em>Leontopithecus rosalia</em> and Marmoset <em>Callithrix</em> sp. Metagenomic Shotgun Pools"
DOI: 10.5281/zenodo.8271172
title: Supplementary Material for publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin (Leontopithecus rosalia} and Marmoset Callithrix sp. Metagenomic Shotgun Pools

description: Supplementary Tables and Figure for the publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin <em>Leontopithecus rosalia</em> and Marmoset <em>Callithrix</em> sp. Metagenomic Shotgun Pools"
DOI: 10.5281/zenodo.8278667
title: Supplementary Material for publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin (Leontopithecus rosalia} and Marmoset Callithrix sp. Metagenomic Shotgun Pools

description: Supplementary Tables and Figure for the publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin <em>Leontopithecus rosalia</em> and Marmoset <em>Callithrix</em> sp. Metagenomic Shotgun Pools"
DOI: 10.5281/zenodo.8284293
title: Supplementary Material for publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin (Leontopithecus rosalia} and Marmoset Callithrix sp. Metagenomic Shotgun Pools

description: Supplementary Tables and Figure for the publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin <em>Leontopithecus rosalia</em> and Marmoset <em>Callithrix</em> sp. Metagenomic Shotgun Pools"
DOI: 10.5281/zenodo.8284585
title: Supplementary Material for publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin (Leontopithecus rosalia} and Marmoset Callithrix sp. Metagenomic Shotgun Pools

description: Supplementary Tables and Figure for the publication "Bifidobacteria Define Gut Microbiome Profiles of Golden Lion Tamarin <em>Leontopithecus rosalia</em> and Marmoset <em>Callithrix</em> sp. Metagenomic Shotgun Pools"
DOI: 10.5281/zenodo.8279670
title: Redback: A Bayesian inference software package for electromagnetic transients - Example data

description: Data associated with plots in the publication <em><strong>Redback: A Bayesian inference software package for electromagnetic transients</strong></em> [arXiv:2308.12806]. To reproduce the publication plots, you can use the notebook linked here. Redback is an open-source, end-to-end Bayesian Inference software package for simulating and fitting electromagnetic transients. It provides an object-orientated Python interface to multiple sampling algorithms, models for several different electromagnetic transients, an interface to download and process the data for multiple transients from various catalogues, simulate transients for real surveys (e.g. ZTF, LSST) and fit the observations through Bayesian inference [github.com/nikhil-sarin/redback]
DOI: 10.5281/zenodo.8273145
title: Redback: A Bayesian inference software package for electromagnetic transients - Example data

description: Data associated with plots in the publication <em><strong>Redback: A Bayesian inference software package for electromagnetic transients</strong></em> [arXiv:2308.12806]. To reproduce the publication plots, you can use the notebook linked here. Redback is an open-source, end-to-end Bayesian Inference software package for simulating and fitting electromagnetic transients. It provides an object-orientated Python interface to multiple sampling algorithms, models for several different electromagnetic transients, an interface to download and process the data for multiple transients from various catalogues, simulate transients for real surveys (e.g. ZTF, LSST) and fit the observations through Bayesian inference [github.com/nikhil-sarin/redback]
DOI: 10.6084/m9.figshare.23999880
title: UMAP channel value files

description: These files are channel value exports from FlowJo representing N=3 uninfected and N=3 Cal/07/09 infected NHBE cultures differentiated for 3 weeks at air-liquid interface in Pneumacult media. To create these files, populations were manually gated in FlowJo to the major cellular populations (see manuscript for staining and gating details). For each defined population, a channel value csv file was exported and a column was added listing the major population from which the file came. Once all 9 populations for a single sample were exported, the csv files were concatenated to create a single file. These files are used as input for making UMAPs in Figure 1B and 2A of the manuscript.
DOI: 10.6084/m9.figshare.23999880.v1
title: UMAP channel value files

description: These files are channel value exports from FlowJo representing N=3 uninfected and N=3 Cal/07/09 infected NHBE cultures differentiated for 3 weeks at air-liquid interface in Pneumacult media. To create these files, populations were manually gated in FlowJo to the major cellular populations (see manuscript for staining and gating details). For each defined population, a channel value csv file was exported and a column was added listing the major population from which the file came. Once all 9 populations for a single sample were exported, the csv files were concatenated to create a single file. These files are used as input for making UMAPs in Figure 1B and 2A of the manuscript.
DOI: 10.5517/ccdc.csd.cc2fjxfb
title: CCDC 2250582: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Addis Getahun, Timothy C. Johnstone|2023|Dalton Trans.|52|11325|doi:10.1039/D3DT02113K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fjxgc
title: CCDC 2250583: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Addis Getahun, Timothy C. Johnstone|2023|Dalton Trans.|52|11325|doi:10.1039/D3DT02113K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fjxhd
title: CCDC 2250584: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Addis Getahun, Timothy C. Johnstone|2023|Dalton Trans.|52|11325|doi:10.1039/D3DT02113K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fjxjf
title: CCDC 2250585: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Addis Getahun, Timothy C. Johnstone|2023|Dalton Trans.|52|11325|doi:10.1039/D3DT02113K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fjxkg
title: CCDC 2250586: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Addis Getahun, Timothy C. Johnstone|2023|Dalton Trans.|52|11325|doi:10.1039/D3DT02113K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fjxlh
title: CCDC 2250587: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Addis Getahun, Timothy C. Johnstone|2023|Dalton Trans.|52|11325|doi:10.1039/D3DT02113K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fkd0f
title: CCDC 2251034: Experimental Crystal Structure Determination

description: Related Article: Hang Li, Na Li, Jinghao Wu, Tianyang Yu, Ran Zhang, Li-Ping Xu, Hao Wei|2023|J.Am.Chem.Soc.|145|17570|doi:10.1021/jacs.3c07640
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fqq41
title: CCDC 2256153: Experimental Crystal Structure Determination

description: Related Article: Franziska Flecken, Anna Knapp, Toni Grell, Christian Dreßler, Schirin Hanf|2023|Inorg.Chem.|62|13038|doi:10.1021/acs.inorgchem.3c01865
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fr51f
title: CCDC 2256584: Experimental Crystal Structure Determination

description: Related Article: Nengni Xu, Wenhua Xu, Meng Sun, Yi Yuan, Xinjun Luan, Ying Wang, Hui Wang|2023|Mat.Advs.|4|3645|doi:10.1039/D3MA00239J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fr53h
title: CCDC 2256586: Experimental Crystal Structure Determination

description: Related Article: Nengni Xu, Wenhua Xu, Meng Sun, Yi Yuan, Xinjun Luan, Ying Wang, Hui Wang|2023|Mat.Advs.|4|3645|doi:10.1039/D3MA00239J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fr52g
title: CCDC 2256585: Experimental Crystal Structure Determination

description: Related Article: Nengni Xu, Wenhua Xu, Meng Sun, Yi Yuan, Xinjun Luan, Ying Wang, Hui Wang|2023|Mat.Advs.|4|3645|doi:10.1039/D3MA00239J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.23992476
title: InVERT final results

description: Primary human bronchial epithelial cells were differentiated at air liquid interface for 3 weeks in Pneumacult media. Infected cells were infected with Cal/07/09 and harvested at 6 and 12 hours post-infection. After harvest, cells were sorted into ciliated and secretory cells via FACS and submitted for stranded RNAseq. Mock infected cells were also included as a control and sorted into ciliated and secretory cells for stranded RNAseq. N=4 replicates were included for each condition.Raw sequencing data has been deposited on NCBI under BioProject number XXXX. RNAseq data was processed with the InVERT pipeline. The final results are included in these files.
DOI: 10.6084/m9.figshare.24036627
title: Research performance of a Peruvian medical students' scientific society in Scopus and Web of Science: a bibliometric analysis of Sociedad Científica de San Fernando

description: These datasets provide raw data for the analysis of the scientific production of medical students from a single university in Peru. The csv. format and text.txt can be analyzed with Bibliometrix R-tool and VOSviewer, and many other programs. The other tab delimited.txt can be analyzed with other online softwares.
DOI: 10.6084/m9.figshare.24036627.v2
title: Research performance of a Peruvian medical students' scientific society in Scopus and Web of Science: a bibliometric analysis of Sociedad Científica de San Fernando

description: These datasets provide raw data for the analysis of the scientific production of medical students from a single university in Peru. The csv. format and text.txt can be analyzed with Bibliometrix R-tool and VOSviewer, and many other programs. The other tab delimited.txt can be analyzed with other online softwares.
DOI: 10.6084/m9.figshare.24036627.v1
title: Untitled ItemResearch performance of a Peruvian medical students' scientific society in Scopus and Web of Science: a bibliometric analysis of Sociedad Científica de San Fernando

description: These datasets provide raw data for the analysis of the scientific production of medical students from a single university in Peru. The csv. format and text.txt can be analyzed with Bibliometrix R-tool and VOSviewer, and many other programs. The other tab delimited.txt can be analyzed with other online softwares.
DOI: 10.6084/m9.figshare.20419398.v1
title: Kelp to whales JSDM data

description: Dataset analyzed in: Hildebrand L., S. Derville, I. Hildebrand, and L.G. Torres. Kelp to whales: Evidence of novel indirect effects from a trophic cascade. In Review.
DOI: 10.5519/qd.vo4igv5d
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5281/zenodo.8284640
title: Paper data for DeepManeuver: Adversarial Test Generation for Trajectory Manipulation of Autonomous Vehicles

description: This repo contains the study and appendix data for "DeepManeuver: Adversarial Test Generation for Trajectory Manipulation of Autonomous Vehicles". DOI 10.1109/TSE.2023.3301443.
DOI: 10.5281/zenodo.8284639
title: Paper data for DeepManeuver: Adversarial Test Generation for Trajectory Manipulation of Autonomous Vehicles

description: This repo contains the study and appendix data for "DeepManeuver: Adversarial Test Generation for Trajectory Manipulation of Autonomous Vehicles". DOI 10.1109/TSE.2023.3301443.
DOI: 10.6084/m9.figshare.23816001
title: Characterization of the haemagglutinin properties of the H5N1 avian influenza virus that caused human infections in Cambodia

description: High pathogenicity avian influenza (HPAI) H5N1 is a subtype of the influenza A virus primarily found in birds. The subtype emerged in China in 1996 and has spread globally, causing significant morbidity and mortality in birds and humans. In Cambodia, a lethal case was reported in February 2023 involving an 11-year-old girl, marking the first human HPAI H5N1 infection in the country since 2014. This research examined the zoonotic potential of the human H5N1 isolate, A/Cambodia/NPH230032/2023 (KHM/23), by assessing its receptor binding, fusion pH, HA thermal stability, and antigenicity. Results showed that KHM/23 exhibits similar receptor binding and antigenicity as the early clade 2.3.2.1c HPAI H5N1 strain, and it does not bind to human-like receptors. Despite showing limited zoonotic risk, the increased thermal stability and reduced pH of fusion in KHM/23 indicate a potential threat to poultry, emphasizing the need for vigilant monitoring.
DOI: 10.6084/m9.figshare.23816001.v2
title: Characterization of the haemagglutinin properties of the H5N1 avian influenza virus that caused human infections in Cambodia

description: High pathogenicity avian influenza (HPAI) H5N1 is a subtype of the influenza A virus primarily found in birds. The subtype emerged in China in 1996 and has spread globally, causing significant morbidity and mortality in birds and humans. In Cambodia, a lethal case was reported in February 2023 involving an 11-year-old girl, marking the first human HPAI H5N1 infection in the country since 2014. This research examined the zoonotic potential of the human H5N1 isolate, A/Cambodia/NPH230032/2023 (KHM/23), by assessing its receptor binding, fusion pH, HA thermal stability, and antigenicity. Results showed that KHM/23 exhibits similar receptor binding and antigenicity as the early clade 2.3.2.1c HPAI H5N1 strain, and it does not bind to human-like receptors. Despite showing limited zoonotic risk, the increased thermal stability and reduced pH of fusion in KHM/23 indicate a potential threat to poultry, emphasizing the need for vigilant monitoring.
DOI: 10.5519/qd.x4djyykf
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (692052 records)
DOI: 10.34740/kaggle/dsv/6365324
title: Balochi Language to English Translation Dataset
DOI: 10.18112/openneuro.ds004469.v1.1.0
title: Temporal Lobe Epilepsy - UNAM
DOI: 10.6084/m9.figshare.6465686
title: Additional file 2 of Tensorial blind source separation for improved analysis of multi-omic data

description: A file containing R scripts for the tPCA, tWFOBI, tWJADE, CCA, sCCA, PARAFAC, JIVE and iCLUSTER algorithms as implemented in this work. (R 17 kb)
DOI: 10.6084/m9.figshare.6465686.v1
title: Additional file 2 of Tensorial blind source separation for improved analysis of multi-omic data

description: A file containing R scripts for the tPCA, tWFOBI, tWJADE, CCA, sCCA, PARAFAC, JIVE and iCLUSTER algorithms as implemented in this work. (R 17 kb)
DOI: 10.6084/m9.figshare.6465680
title: Additional file 1: of Embryonic expression patterns and phylogenetic analysis of panarthropod sox genes: insight into nervous system development, segmentation and gonadogenesis

description: Table S1. Primers (RTF 5 kb)
DOI: 10.6084/m9.figshare.6465680.v1
title: Additional file 1: of Embryonic expression patterns and phylogenetic analysis of panarthropod sox genes: insight into nervous system development, segmentation and gonadogenesis

description: Table S1. Primers (RTF 5 kb)
DOI: 10.6084/m9.figshare.6465650
title: Additional file 3: of Identification of key genes in human airway epithelial cells in response to respiratory pathogens using microarray analysis

description: The GSE48466 mRNA expression profile dataset. 12950 DEGs between normal and infected airway epithelial cells were identified. (XLSX 964 kb)
DOI: 10.6084/m9.figshare.6465650.v1
title: Additional file 3: of Identification of key genes in human airway epithelial cells in response to respiratory pathogens using microarray analysis

description: The GSE48466 mRNA expression profile dataset. 12950 DEGs between normal and infected airway epithelial cells were identified. (XLSX 964 kb)
DOI: 10.6084/m9.figshare.6465644
title: Additional file 2: of Assessment of blood levels of heavy metals including lead and manganese in healthy children living in the Katanga settlement of Kampala, Uganda

description: Data codebook. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.6465644.v1
title: Additional file 2: of Assessment of blood levels of heavy metals including lead and manganese in healthy children living in the Katanga settlement of Kampala, Uganda

description: Data codebook. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.6465638
title: Additional file 2: of Identification of key genes in human airway epithelial cells in response to respiratory pathogens using microarray analysis

description: The GSE6802 mRNA expression profile dataset. 1241 DEGs between normal and infected airway epithelial cells were identified. (XLSX 101 kb)
DOI: 10.6084/m9.figshare.6465638.v1
title: Additional file 2: of Identification of key genes in human airway epithelial cells in response to respiratory pathogens using microarray analysis

description: The GSE6802 mRNA expression profile dataset. 1241 DEGs between normal and infected airway epithelial cells were identified. (XLSX 101 kb)
DOI: 10.6084/m9.figshare.6465632
title: Additional file 1: of Assessment of blood levels of heavy metals including lead and manganese in healthy children living in the Katanga settlement of Kampala, Uganda

description: Study dataset. (XLSX 283 kb)
DOI: 10.6084/m9.figshare.6465632.v1
title: Additional file 1: of Assessment of blood levels of heavy metals including lead and manganese in healthy children living in the Katanga settlement of Kampala, Uganda

description: Study dataset. (XLSX 283 kb)
DOI: 10.6084/m9.figshare.6465629
title: Additional file 1: of Identification of key genes in human airway epithelial cells in response to respiratory pathogens using microarray analysis

description: The GSE3397 mRNA expression profile dataset. 2033 DEGs between normal and infected airway epithelial cells were identified. (XLSX 158 kb)
DOI: 10.6084/m9.figshare.6465629.v1
title: Additional file 1: of Identification of key genes in human airway epithelial cells in response to respiratory pathogens using microarray analysis

description: The GSE3397 mRNA expression profile dataset. 2033 DEGs between normal and infected airway epithelial cells were identified. (XLSX 158 kb)
DOI: 10.6084/m9.figshare.6465560
title: Additional file 2: of The development of high resolution maps of tsetse abundance to guide interventions against human African trypanosomiasis in northern Uganda

description: R code demonstrating the use of INLA to fit zero-inflated negative binomial geostatistical models to the tsetse count data. (R 4 kb)
DOI: 10.6084/m9.figshare.6465560.v1
title: Additional file 2: of The development of high resolution maps of tsetse abundance to guide interventions against human African trypanosomiasis in northern Uganda

description: R code demonstrating the use of INLA to fit zero-inflated negative binomial geostatistical models to the tsetse count data. (R 4 kb)
DOI: 10.6084/m9.figshare.6465530
title: Additional file 1: of The development of high resolution maps of tsetse abundance to guide interventions against human African trypanosomiasis in northern Uganda

description: Tsetse data and their associated environmental covariates at each of the 236 baseline trapping sites. (CSV 48 kb)
DOI: 10.6084/m9.figshare.6465530.v1
title: Additional file 1: of The development of high resolution maps of tsetse abundance to guide interventions against human African trypanosomiasis in northern Uganda

description: Tsetse data and their associated environmental covariates at each of the 236 baseline trapping sites. (CSV 48 kb)
DOI: 10.6084/m9.figshare.6465512
title: Additional file 1: of Visual and radiographic caries detection: a tailored meta-analysis for two different settings, Egypt and Germany

description: All data used the in the meta-analysis, tabulated. (ZIP 105 kb)