cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7483/opendata.cms.l1yt.ytf9
title: /NMSSM_XToYHTo2W2BTo2Q1L1Nu2B_MX-1000_MY-125_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.15468/dl.e55afu
title: Occurrence Download

description: A dataset containing 2926 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "Geometry POLYGON ((-108.9483 30.17969, -108.1407 30.17969, -108.1407 31.33339, -108.9483 31.33339, -108.9483 30.17969))",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material citation)"
 ]
 }
 }
 ]
}

 The dataset includes 2926 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069770-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7483/opendata.cms.u4gj.mvs9
title: /NMSSM_XToYHTo2W2BTo2Q1L1Nu2B_MX-1000_MY-150_TuneCP5_13TeV-madgraph-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.15468/dl.dw1euj
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physalis minimaculata Waterf.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051757-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tdpg39
title: Occurrence Download

description: A dataset containing 798 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Festuca circummediterranea Patzke"
 ]
}

 The dataset includes 798 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010465-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ihkmo3
title: Occurrence Download

description: A dataset containing 865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physalis lagascae Roem. & Schult.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 865 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051758-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kdg24u
title: Occurrence Download

description: A dataset containing 2980 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tremarctos ornatus (F.G.Cuvier, 1825)"
 ]
}

 The dataset includes 2980 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0274994-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vfc6h
title: Occurrence Download

description: A dataset containing 917 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Oriolus steerii Sharpe, 1877"
 ]
}

 The dataset includes 917 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059669-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nsosys
title: Occurrence Download

description: A dataset containing 22849 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus pyrenaica Willd."
 ]
}

 The dataset includes 22849 records from 143 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051759-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r8r4n6
title: Occurrence Download

description: A dataset containing 114306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 114306 records from 230 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0196831-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sucp9k
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gaultheria stenophylla P.W.Fritsch & Lu Lu"
 ]
}

 The dataset includes 32 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010476-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.snewkv
title: Occurrence Download

description: A dataset containing 571 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physalis viscosa L.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 571 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051760-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mjj4y
title: Occurrence Download

description: A dataset containing 8791 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laguncularia racemosa (L.) C.F.Gaertn."
 ]
}

 The dataset includes 8791 records from 262 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235846-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gmnv8f
title: Occurrence Download

description: A dataset containing 596 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Phylloscartes ceciliae Teixeira, 1987"
 ]
}

 The dataset includes 596 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059670-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v282k5
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-120.58924 48.32962,-121.14073 46.70078,-118.47302 46.20058,-117.94718 48.3168,-120.58924 48.32962))",
 "TaxonKey is Brachylagus idahoensis (Merriam, 1891)"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0151487-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k9gpln
title: Occurrence Download

description: A dataset containing 680005 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Ecuador",
 "StateProvince is pichincha",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 680005 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051761-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xmugep
title: Occurrence Download

description: A dataset containing 4221 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Natrix tessellata (Laurenti, 1768)"
 ]
}

 The dataset includes 4221 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0217025-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.84k4gs
title: Occurrence Download

description: A dataset containing 1039 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Lipaugus weberi A.M.Cuervo, P.G.W.Salaman, T.M.Donegan & J.M.Ochoa, 2001"
 ]
}

 The dataset includes 1039 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010495-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6www5j
title: Occurrence Download

description: A dataset containing 817 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phytolacca dioica L.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 817 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051763-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bejecy
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ostorhinchus nanus (Allen, Kuiter & Randall, 1994)"
 ]
}

 The dataset includes 23 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059536-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dtg8yv
title: Occurrence Download

description: A dataset containing 492 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Myophonus robinsoni Ogilvie-Grant, 1905"
 ]
}

 The dataset includes 492 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003327-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29se6j
title: Occurrence Download

description: A dataset containing 429 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is China",
 "Country is Chinese Taipei"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Castanopsis hystrix Hook.f. & Thomson ex A.DC."
 ]
}

 The dataset includes 429 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0227365-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tenr7m
title: Occurrence Download

description: A dataset containing 2675 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pilea microphylla (L.) Liebm.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 2675 records from 173 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051766-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nw9k44
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geranium kauaiense (Rock) H.St.John"
 ]
}

 The dataset includes 31 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010467-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bijdsz
title: Occurrence Download

description: A dataset containing 1011 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pimenta dioica (L.) Merr.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 1011 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051773-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m3dqza
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chresta artemisiifolia Siniscalchi & Loeuille"
 ]
}

 The dataset includes 12 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0151488-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k276sj
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calydorea alba Roitman & A.Castillo"
 ]
}

 The dataset includes 14 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0151489-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5wym9
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.30_1",
 "TaxonKey is Schefflera diversifoliolata H.L.Li"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235873-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pdjex6
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Lonchura montana Junge, 1939"
 ]
}

 The dataset includes 149 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010478-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xub8gr
title: Occurrence Download

description: A dataset containing 15191 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Musa L."
 ]
}

 The dataset includes 15191 records from 208 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051762-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qvhzjc
title: Occurrence Download

description: A dataset containing 2640 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ireland",
 "TaxonKey is Ostrea edulis"
 ]
}

 The dataset includes 2640 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058135-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2d83ca
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dendostrea folium, Alectryonella haliotidaea, Dendrostrea folium, Lopha folium, Lopha theca, Mytilus folium, Ostraea affinis, Ostraea dubia, Ostrea affinis, Ostrea bresia, Ostrea cognata, Ostrea dubia, Ostrea erucella, Ostrea folium, Ostrea fucorum, Ostrea haliotidaea, Ostrea labrella, Ostrea serra)",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 72 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058136-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uhmy4e
title: Occurrence Download

description: A dataset containing 12639 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is National River Water Quality Network Database (Macro-invertebrates) 2009-2018"
 ]
}

 The dataset includes 12639 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058137-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r4aupz
title: Occurrence Download

description: A dataset containing 1417 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Anopheles stephensi"
 ]
}

 The dataset includes 1417 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058138-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29859094
title: WGCNA combined with machine learning for analysis of diagnostic markers of preeclampsia associated with the hedgehog signaling pathway

description: Abnormal hedgehog (Hh) signaling is linked to preeclampsia (PE). This study aimed to identify Hh-related diagnostic biomarkers for PE and assess the role of immune infiltration. The PE dataset was obtained from GEO to screen DEGs. WGCNA was utilized to identify Hh pathway-related genes. Following the intersection of the two genes, key genes were screened by using LASSO, SVM-RFE, and RF. A model was constructed, with ROC applied for evaluating its performance. The ssGSEA was employed to analyze immune infiltration. Network Analyst was utilized to predict miRNA/TF targets. Six Hh-related diagnostic genes were identified (SLC20A1, GPT2, PDK4, COASY, KRT81, CD163L1). The diagnostic model showed high accuracy (AUC &gt; 0.8) in training and validation sets. PE patients exhibited immune dysfunction, including reduced dendritic cell, macrophage, and mast cell activity. Diagnostic genes strongly correlated with immune cells. Additionally, 25 miRNAs and 34 TFs potentially regulating these genes were predicted. Six potential PE diagnostic biomarkers were identified, and their immune interactions were explored. This study enhances understanding of PE pathogenesis and suggests therapeutic targets.
DOI: 10.6084/m9.figshare.29859094.v1
title: WGCNA combined with machine learning for analysis of diagnostic markers of preeclampsia associated with the hedgehog signaling pathway

description: Abnormal hedgehog (Hh) signaling is linked to preeclampsia (PE). This study aimed to identify Hh-related diagnostic biomarkers for PE and assess the role of immune infiltration. The PE dataset was obtained from GEO to screen DEGs. WGCNA was utilized to identify Hh pathway-related genes. Following the intersection of the two genes, key genes were screened by using LASSO, SVM-RFE, and RF. A model was constructed, with ROC applied for evaluating its performance. The ssGSEA was employed to analyze immune infiltration. Network Analyst was utilized to predict miRNA/TF targets. Six Hh-related diagnostic genes were identified (SLC20A1, GPT2, PDK4, COASY, KRT81, CD163L1). The diagnostic model showed high accuracy (AUC &gt; 0.8) in training and validation sets. PE patients exhibited immune dysfunction, including reduced dendritic cell, macrophage, and mast cell activity. Diagnostic genes strongly correlated with immune cells. Additionally, 25 miRNAs and 34 TFs potentially regulating these genes were predicted. Six potential PE diagnostic biomarkers were identified, and their immune interactions were explored. This study enhances understanding of PE pathogenesis and suggests therapeutic targets.
DOI: 10.6084/m9.figshare.30165308
title: Identification of potential circadian rhythm-related hub genes and immune infiltration in preeclampsia through bioinformatics analysis

description: Preeclampsia (PE) is a severe pregnancy complication with unclear molecular mechanisms. Emerging evidence suggests that circadian rhythm disruption contributes to PE pathogenesis. The study aims to identify circadian rhythm-related genes in PE and explore their diagnostic value and immune characteristics. Four gene expression datasets (GSE75010, GSE60438, GSE186257, GSE14722) were downloaded from the GEO database. Modules correlated with PE were identified via weighted gene co-expression network analysis (WGCNA). Differential expression was assessed with the limma package in R, and Gene Ontology and Kyoto Encyclopedia of Genes and Genomes were carried out using clusterProfiler. Diagnostic accuracy was evaluated using Receiver operating characteristic curves in training and validation sets. Immune infiltration was analyzed using CIBERSORT and Single Sample Gene Set Enrichment Analysis algorithms. PE patients were clustered into subtypes with ConsensusClusterPlus. ceRNA and Transcription Factor regulatory networks were constructed using miRTarBase, ENCODE, and NetworkAnalyst. CRH and LEP were identified as circadian rhythm-related hub genes with strong diagnostic value. Molecular subtyping based on their expression revealed two PE subtypes with distinct immune infiltration patterns and biological functions. Regulatory network construction highlighted potential upstream mechanisms. This bioinformatics analysis provides preliminary evidence for CRH and LEP as potential circadian rhythm-related diagnostic biomarkers in PE. However, as the findings are derived from limited GEO datasets, they should be interpreted with caution, and large‑scale, multi‑center prospective studies measuring their expression in serum or placental tissues across diverse populations are required to confirm their clinical utility. This study identified two novel circadian rhythm-related genes as potential diagnostic biomarkers for preeclampsia.We revealed significant alterations in immune cell infiltration and distinct molecular subtypes within preeclampsia patients.This study constructed comprehensive ceRNA and transcription factor networks, unveiling upstream regulatory mechanisms of key preeclampsia genes. This study identified two novel circadian rhythm-related genes as potential diagnostic biomarkers for preeclampsia. We revealed significant alterations in immune cell infiltration and distinct molecular subtypes within preeclampsia patients. This study constructed comprehensive ceRNA and transcription factor networks, unveiling upstream regulatory mechanisms of key preeclampsia genes.