cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.cd711/4
title: Tree files

description: Tree files for the phylogenies displayed in Supporting Figure 5. Phylogenies were generated using PhyML.
DOI: 10.5061/dryad.cd711/5
title: Incomplete mitogenomes for Neofelis Nebulosa and Leptailurus serval

description: This zip file contains two fasta files with the incomplete mitogenomes for Neofelis Nebulosa ("NNE_Fell") and Leptailurus serval ("LSE_Togo"). These mitogenomes were too low quality for upload on GenBank: LSE_Togo is 44.5% complete and NNE_Fell is 51.0% complete. The length of stretches of N's are estimated based on a closely related individual. For more information regarding these sequences, feel free to contact the authors.
DOI: 10.5061/dryad.fk558/1
title: contigs+singletons.fasta

description: MIRA contigs and singletons concatenated into a single fasta file or each library
DOI: 10.5061/dryad.fk558/2
title: scripts+protocol

description: Python scripts used for data handling, and a shellscript style bioinformatic protocol
DOI: 10.5061/dryad.fk558/3
title: alignments

description: Alignments of reads with matches that passed the Clustal step
DOI: 10.5061/dryad.fk558/4
title: distance table

description: Clustal based distance table used for selection of loci for subsequent primer design
DOI: 10.5061/dryad.gt678/2
title: SpatialStructure_Data

description: Data file containing latitudes and longitudes of populations used in common garden studies
DOI: 10.5061/dryad.gt678/3
title: Selection_Data

description: Data file containing measurements of selection gradients and differentials
DOI: 10.5061/dryad.gt678/4
title: MetaPCA_Analysis

description: R script with analysis of common garden data and with output for Fig. 1
DOI: 10.5061/dryad.gt678/5
title: SpatialStructure_Analysis

description: R script with analysis of spatial structure and with output for Box 1, Fig. 2
DOI: 10.5061/dryad.gt678/6
title: Selection_Analysis

description: R script with analysis of selection data and producing Fig. 2
DOI: 10.5061/dryad.gt678/7
title: ClinesModel

description: Stepwise colonization model demonstrating rapid evolution of non-adaptive trait clines, without output in Box 2, Fig. 1
DOI: 10.5061/dryad.j126v/1
title: p18

description: DNA alignment of the p18 region in Fasta format
DOI: 10.5061/dryad.j126v/2
title: p108

description: DNA alignment of the p108 region in Fasta format
DOI: 10.5061/dryad.j126v/3
title: p148

description: DNA alignment of the p148 region in Fasta format
DOI: 10.5061/dryad.j126v/4
title: p175

description: DNA sequence alignment of the p175 region in Fasta format
DOI: 10.5061/dryad.rd234/76
title: Fig. 81

description: High-resolution Fig. 81
DOI: 10.5061/dryad.rd234/77
title: Fig. 82

description: High-resolution Fig. 82
DOI: 10.5061/dryad.rd234/78
title: Fig. 83

description: High-resolution Fig. 83
DOI: 10.5061/dryad.rd234/79
title: Fig. 84

description: High-resolution Fig. 84
DOI: 10.5061/dryad.rd234/80
title: Fig. 85

description: High-resolution Fig. 85
DOI: 10.5061/dryad.rd234/81
title: Fig. 86

description: High-resolution Fig. 86
DOI: 10.5061/dryad.rd234/82
title: Fig. 87

description: High-resolution Fig. 87
DOI: 10.5061/dryad.2f681/1
title: eDNA collection and extraction methods_Dryad data

description: Copy number of individual samples for experiments 1–3, fish biomasses of each tank for experiment 2, individual sample extraction efficiencies for experiment 3, and qPCR standard curves
DOI: 10.5061/dryad.3j8t5/1
title: Cytochrome_b

description: Cytochrome b sequences
DOI: 10.5061/dryad.3j8t5/2
title: Growth_Hormone_1

description: Growth Hormone-1 sequences phased
DOI: 10.5061/dryad.3j8t5/3
title: Growth_Hormone_2

description: Growth Hormone-2 sequences phased
DOI: 10.5061/dryad.3j8t5/5
title: S7_2

description: S7-2 sequences phased
DOI: 10.5061/dryad.6773h/1
title: Daphnia microsatellites
DOI: 10.5061/dryad.8fh42/1
title: Floral spectral reflectance measured at different stages of flowering for 219 angiosperm species in Japan
DOI: 10.5061/dryad.9rs72/1
title: Cardinale & Marsh PLOS One Participant Level Data Studies 1, 2 & 3

description: The data deposited are all underlying participant level data from the research article "Impact of psychopathy on moral judgments about causing fear and physical harm." authored by Cardinale & Marsh. All data were collected from human subjects following IRB approved procedures. Data include self-reported psychopathic traits measured by the Psychopathic Personality Inventory - Revised (PPI-R), self-reported moral intuitions measured by the Moral Foundations Questionnaire (MFQ), self-reported political orientation and self-reported aggressive behavior as measured by the Reactive Proactive Aggression Questionnaire (RPQ). Raw data is included for two experimental tasks: the Emotionally Evocative Statements Task (EEST) for Study 1 as well as participant level responses to the novel moral scenarios used in Studies 2 & 3. Please see supplementary materials for these stimuli.
DOI: 10.5061/dryad.f2g0f/1
title: Alignments  PRANK original

description: The file contains all the alignments generated using the online version of PRANK alignment program, prior to exclusion of poorly aligned regions
DOI: 10.5061/dryad.f2g0f/2
title: Alignments After MacClade

description: This folder contains the alignment files for wood decay gene families after exclusion of poorly aligned regions using MacClade.
DOI: 10.5061/dryad.f2g0f/3
title: RAxMLtrees

description: the folder contains the RAxML trees generated for reconciliation of wood decay gene families
DOI: 10.5061/dryad.fd7q8/1
title: Data from Bouton et al Stress Coping style paper

description: MS file containing all data used in Boulton et al MS on stress coping style in sheepshead swordtails.
DOI: 10.5061/dryad.j126v/10
title: p227

description: DNA sequence alignment of the p227 region in Fasta format
DOI: 10.5061/dryad.j126v/11
title: p237

description: DNA sequence alignment of the p237 region in Fasta format
DOI: 10.5061/dryad.j126v/12
title: p248

description: DNA sequence alignment of the p248 region in Fasta format
DOI: 10.5061/dryad.j126v/13
title: p271

description: DNA sequence alignment of the p271 region in Fasta format
DOI: 10.5061/dryad.j126v/5
title: p187

description: DNA sequence alignment of the p187 region in Fasta format
DOI: 10.5061/dryad.j126v/6
title: p203

description: DNA sequence alignment of the p203 region in Fasta format
DOI: 10.5061/dryad.j126v/7
title: p204

description: DNA sequence alignment of the p204 region in Fasta format
DOI: 10.5061/dryad.j126v/8
title: p215

description: DNA sequence alignment of the p215 region in Fasta format
DOI: 10.5061/dryad.j126v/9
title: p220

description: DNA sequence alignment of the p220 region in Fasta format
DOI: 10.5061/dryad.nv5j5/1
title: Microsatellite Data

description: This file contains the genotypes for 12 microsatellite loci and 352 individuals collected in 18 populations of esparto grasshopper (Ramburiella hispanica)
DOI: 10.5061/dryad.nv5j5/2
title: Natural Vegetation GIS Layer

description: GIS layer including natural vegetation habitat patches (non-cultivated areas) in the study area
DOI: 10.5061/dryad.rd234/83
title: Fig. 88

description: High-resolution Fig. 88
DOI: 10.5061/dryad.rd234/84
title: Fig. 89

description: High-resolution Fig. 89
DOI: 10.5061/dryad.rd234/85
title: Fig. 90

description: High-resolution Fig. 90
DOI: 10.5061/dryad.rd234/86
title: Fig. 91

description: High-resolution Fig. 91
DOI: 10.5061/dryad.rd234/87
title: Fig. 92

description: High-resolution Fig. 92
DOI: 10.5061/dryad.rd234/88
title: Fig. 93

description: High-resolution Fig. 93
DOI: 10.5061/dryad.rd234/89
title: Fig. 94

description: High-resolution Fig. 94
DOI: 10.5061/dryad.rd234/90
title: Fig. 95

description: High-resolution Fig. 95
DOI: 10.5061/dryad.vt280/1
title: Sticta_deyana_DATASETS

description: This is a zipped folder containing the input files used for Bayesian Inference and Maximum Likelihood analyses conducted for this study. An appendix from the manuscript is also included to facilitate translation of isolate numbers to GenBank accession numbers in the datasets.
DOI: 10.6084/m9.figshare.1294246
title: Australian Bird Data reference list Excel file
DOI: 10.5061/dryad.1b52s/1
title: Canis_lupus_FE_models
DOI: 10.5061/dryad.1b52s/2
title: Canis_mesomelas_FE_models
DOI: 10.5061/dryad.1b52s/3
title: Crocuta_crocuta_FE_models
DOI: 10.5061/dryad.1b52s/4
title: Herpestes_javanicus_FE_models
DOI: 10.5061/dryad.1b52s/5
title: Lycaon_pictus_FE_models
DOI: 10.5061/dryad.1b52s/6
title: Mephitis_mephitis_FE_models
DOI: 10.5061/dryad.1b52s/7
title: Oodectes_herpestoides_FE_models
DOI: 10.5061/dryad.1b52s/8
title: Panthera_pardus_FE_models
DOI: 10.5061/dryad.1b52s/9
title: Parahyaena_brunnea_FE_models
DOI: 10.5061/dryad.1mn1n/3
title: NMR data
DOI: 10.5061/dryad.3j8t5/4
title: S7_1

description: S7-1 sequences phased
DOI: 10.5061/dryad.7p1d3/1
title: Tachinid abundance and species richness in organic and conventional farms

description: The file contains all data used in the statistical analyses described in the materials and methods section of the article. The dataset includes: “Region” (“S” = Central South West and “N” = North Midlands), “Cluster” (the cluster of paired landscapes), “Landscape” (“hotspot” = landscapes with high proportion of land under organic farming and “coldspot” = landscapes with low proportion of land under organic farming), “Management” (“Organic” and “Conventional” farm management), “Habitat” (“arable” = mainly winter wheat fields and “grassland” = mainly grazed permanent pastures), “Field” (three replicates A-C), “Location” (“margin” and “centre” trap position within each field), “Abundance” and “Species Richness” (total per each site).
DOI: 10.5061/dryad.8s459/2
title: new_provean_results_all

description: Results of PROVEAN analyses identifying deleterious non-synonymous mutations. First column identifies the non-synonymous AA changes and their position (e.g. P113A). The correspondence between this AA change and the SNPs identified in the dataset can be found in this file (new_snp_table_effect). Second column is the Provean score.  Third column are the name of the genes.
DOI: 10.5061/dryad.8s459/3
title: new_sift_results_all

description: Results of SIFT analyses identifying deleterious non-synonymous mutations. First column identifies the non-synonymous AA changes and their positions (e.g. S11T). Column 2-6 are the SIFT statistics. Last column are the name of the genes.
DOI: 10.5061/dryad.8s459/4
title: unique_orf

description: Unique (longest) open reading frames identified in the reference transcriptome
DOI: 10.5061/dryad.8s459/5
title: snp_table_all3

description: Genotypes and positions of all SNPs identified in the dataset.
DOI: 10.5061/dryad.8s459/6
title: new_snp_table_effect

description: List of all SNPs. Column 4-43 indicate whether this SNP was noncoding (nc), non-synonymous (ns), synonymous (s), alternate stop codon (STOP), or homozygous reference allele (0). Column 44 indicates whether this mutation was analyzed by PROVEAN. Column 45 indicates PROVEAN score, if applicable. Column 46-50 indicate frequency of alternate allele in different classes of individuals.
DOI: 10.5061/dryad.bn27c/1
title: Farine_Sheldon_data

description: Input data for social selection analysis
DOI: 10.5061/dryad.fc7mn/1
title: Body temperature and weather data

description: Body temperature (page 1) and weather (page 2) data.
DOI: 10.5061/dryad.fc7mn/2
title: Respirometry data

description: Basal metabolic rate, non-shivering thermogenesis and summit metabolism data
DOI: 10.5061/dryad.g70nj/1
title: Singapore coral settlement raw data 2015

description: Two years of coral settlement data from Singapore (September 2011 to 2013) at seven sites. Data broken down into three families (Acroporidae, Pocilloporidae, Poritidae), and all other coral spat categorized as 'others'.
DOI: 10.5061/dryad.g70nj/2
title: Singapore coral cover raw data 2015

description: Percent cover hard coral at seven sites in Singapore.
DOI: 10.5061/dryad.j126v/14
title: p8593

description: DNA sequence alignment of the p8593 region in Fasta format
DOI: 10.5061/dryad.j126v/15
title: p10849

description: DNA sequence alignment of the p10849 region in Fasta format
DOI: 10.5061/dryad.j126v/16
title: p32096

description: DNA sequence alignment of the p32096 region in Fasta format
DOI: 10.5061/dryad.j126v/17
title: p18_5sp

description: p18 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/18
title: p108_5sp

description: p108 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/19
title: p148_5sp

description: p148 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/20
title: p175_5sp

description: p175 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/21
title: p187_5sp

description: p187 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/22
title: p203_5sp

description: p203 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.n6g3q/1
title: Great tit breeding attempts, oak and caterpillar phenology data

description: Data collected in the field (Wytham Woods, Oxford, UK)
DOI: 10.5061/dryad.nn153/1
title: concatenation_RAxML

description: Concatenation tree for 75 accessions across Sarraceniaceae
DOI: 10.5061/dryad.nn153/2
title: concatenation_Sarracenia

description: Concatenation sequences of 75 accessions used for RAxML analysis in phylip format
DOI: 10.5061/dryad.nn153/3
title: Chloroplast_Sarracenia

description: 42kb of chloroplast for 75 accessions of Sarraceniaceae in phylip format. Was analyzed in RAxML.
DOI: 10.5061/dryad.nn153/4
title: chloroplast_RAxML

description: Sarracenia chloroplast tree estimated using RAxML with 75 accessions
DOI: 10.5061/dryad.123qg/1
title: Apt

description: Allele sequences of the Apterous locus from Helicoverpa armigera
DOI: 10.5061/dryad.123qg/2
title: Cyc

description: Alleles of intron of Cycle from Helicoverpa armigera
DOI: 10.5061/dryad.123qg/4
title: Cyp303_arm

description: Alleles of intron of Cyp303 from Helicoverpa armigera
DOI: 10.5061/dryad.19f18/1
title: supp data sequences

description: fasta file of the sequences used for the phylogenetic analysis
DOI: 10.5061/dryad.1b52s/10
title: Procyon_lotor_FE_models
DOI: 10.5061/dryad.1b52s/11
title: Thinocyon_lotor_FE_models
DOI: 10.5061/dryad.1b52s/12
title: Ursus_arctos_FE_models
DOI: 10.5061/dryad.1b52s/13
title: Ursus_maritimus_FE_models
DOI: 10.5061/dryad.1bp46/1
title: Supplementary data table
DOI: 10.5061/dryad.1ds88/1
title: Data from the nested half sib full sib quantitative genetic design

description: Data from the nested half sib full sib quantitative genetic design used to estimate heritabilities and genetic variance components for egg-to-adult viability under laboratory (lab) and semi-natural field (field) conditions, encompassing cold (1), benign (2), and hot (3) temperatures in populations from Innisfail (1) and Melbourne (2), Australia. Each egg (id), sire (sire), dam (dam), and replicate vial (rep) is assigned a unique identification code. Data used for estimating genetic correlations are presented in spreadsheets 'Lab_cor_inn' and Lab_cor_melb'. In the remaining spreadsheets data from each individual test environment and population are presented.
DOI: 10.5061/dryad.1hc35/1
title: SNP Data Mopti, RbMM, RbSS strains and 2 field populations

description: SNPs identified by full-genome sequencing for Mopti, RbMM, RbSS strains and targeted sequencing of X-island for 2 An. coluzzii and gambiae s.s. populations from Ghana. The files were generated by GATK (VCF format).
DOI: 10.5061/dryad.80j0r/1
title: Candellariella_5

description: ITS DNA alignment for Candelariella
DOI: 10.5061/dryad.80j0r/2
title: 5_Lecidea_mtSSU_aligned

description: mtSSU DNA alignment for Lecidea analysis
DOI: 10.5061/dryad.8s459/7
title: table_S1_24_02_15

description: Table S1 with information about samples (location, sequencing stats, etc.)
DOI: 10.5061/dryad.9sn3k/1
title: Zhao and Wang

description: flower traits,seed set and visitation rate of pollinators across all populations
DOI: 10.5061/dryad.cq4fd/1
title: Georeferenced locality data for six Cape lineages

description: This data file contains geographical coordinate data for herbarium specimens representing six lineages of Cape plants. The precision of geo-referencing is indicated via a precision score. Specimens used were mostly from BOL, NBG and/or PRE. For each record, we indicate the source herbarium, collector and collection details (including a verbal description) and the coordinate data.
DOI: 10.5061/dryad.h9541/1
title: Carnivore_and_Metazoan_datasets

description: This zip file contain the input trees, in newick format, used in a supertree analysis to infer the metazoan phylogenetic supertree. It also contains 10 carnivore input tree datasets, in newick format, that were used in a supertree analysis to reconstruct the phylogenetic supertree for the Carnivores.
DOI: 10.5061/dryad.j126v/23
title: p204_5sp

description: p204 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/24
title: p215_5sp

description: p215 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/25
title: p220_5sp

description: p220 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/26
title: p227_5sp

description: p227 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/27
title: p237_5sp

description: p237 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/28
title: p248_5sp

description: p248 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/29
title: p271_5sp

description: p271 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/30
title: p8593_5sp

description: p8593 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/31
title: p10849_5sp

description: p10849 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.j126v/32
title: p32096_5sp

description: p32096 Fasta alignment for BEAST analysis
DOI: 10.5061/dryad.jc3s8/1
title: Supplementary file-data

description: Data: Rational belief and behaviour: partial non-adherence
DOI: 10.5061/dryad.nn153/5
title: MPEST_199

description: Sarracenia species tree estimated from 199 genes in MP-EST
DOI: 10.5061/dryad.nn153/6
title: MPEST_accession

description: Accession tree estimated using 199 genes in MP-EST
DOI: 10.5061/dryad.nn153/7
title: Sarracenia_fasta_199

description: Zip file containing the 199 genes in fasta format
DOI: 10.5061/dryad.nn153/8
title: genetrees_nwk

description: The zip file contains all the bootstrap gene files.  There are 199 files (one for each gene) with 500 bootstrapped gene trees within each file. These were all estimated from RAxML and used in MP-EST to estimate the species tree.
DOI: 10.5061/dryad.nt6ch/1
title: 1 Aligned trnL-F sequences used in this study—before using gblocks.

description: 1) Aligned trnL-F sequences used in this study—before and after using gblocks. Alignment of Rhynchospora, and Pleurostachys species plus some outgroups in Cyperaceae
DOI: 10.5061/dryad.nt6ch/2
title: 1 Buddenhagen et al Rhynchospora alignment gblocked

description: 1) Aligned trnL-F sequences used in this study—after using gblocks. Alignment of Rhynchospora, and Pleurostachys species plus some outgroups in Cyperaceae Conserved regions of an alignment of Rhynchospora and Pleurostachys and some outgroups in Cyperaceae
DOI: 10.5061/dryad.nt6ch/3
title: 3 Buddenhagen et al Rhynchospora chronogram

description: 3) BEAST chronogram with node heights equal to the mean and support values indicated by posteriors and 95% credible intervals provided (graphical depiction)
DOI: 10.5061/dryad.nt6ch/4
title: 4 Buddenhagen et al Rhynchospora chronogram

description: 4) BEAST chronogram with support values indicated by posteriors and 95% credible intervals provided in nexus format.
DOI: 10.5061/dryad.nt6ch/5
title: 2 Character Coding Regions C4 habitat inflorescence

description: 2) Character state coding used in ancestral state reconstructions; explanation for codes provided at bottom of text file. This file contains the character coding for Regions, habitat, C4 photosynthetic pathway and inflorescence type.
DOI: 10.5061/dryad.p0dn0/1
title: Supplementary data

description: Supplementary data includes the RAxML phylogram for the concatenated dataset (16S rRNA, 28S rRNA, COI and H3), the BEAST input xml file and the BEAST MCC tree file. For details see the electronic supplementary material of the article.
DOI: 10.5061/dryad.qk0b0/1
title: Data in Figures 1B and 1D

description: With respect to Fig. 1B, the median conditioned avoidance scores, as plotted are given. With respect to Fig. 1D, raw data, as plotted, are included. For further details, please see the respective figure legends.
DOI: 10.5061/dryad.s01kf/31
title: DatasetV_n16

description: Alignment of sequence data, filtered according to the parameters listed in the file 'Dataset_details.csv'
DOI: 10.5061/dryad.s01kf/32
title: DatasetW_n14

description: Alignment of sequence data, filtered according to the parameters listed in the file 'Dataset_details.csv'
DOI: 10.5061/dryad.s01kf/33
title: DatasetX_n24

description: Alignment of sequence data, filtered according to the parameters listed in the file 'Dataset_details.csv'
DOI: 10.5061/dryad.s01kf/34
title: Output_tree_files

description: Tree files from ML and SNAPP analysis, including the results presented in the following manuscript figures: 2, S3, S4, S5.
DOI: 10.5061/dryad.123qg/10
title: Tc

description: Alleles of intron of the Tc locus from Helicoverpa armigera
DOI: 10.5061/dryad.123qg/12
title: up3_final

description: Alleles of intron of the upstream 3kb from the Cyp303 locus from Helicoverpa armigera
DOI: 10.5061/dryad.123qg/3
title: Cyp303_all

description: Alleles of intron of Cyp303 from Helicoverpa species
DOI: 10.5061/dryad.123qg/5
title: Cyp305

description: Alleles of intron of Cyp305 from Helicoverpa armigera
DOI: 10.5061/dryad.123qg/6
title: down3

description: Alleles of region 3kb away from Cyp303 from Helicoverpa armigera
DOI: 10.5061/dryad.123qg/7
title: Per

description: Alleles of intron of the Period locus from Helicoverpa armigera
DOI: 10.5061/dryad.123qg/8
title: Phc

description: Alleles of intron of the Phc locus from Helicoverpa armigera
DOI: 10.5061/dryad.123qg/9
title: SCAP

description: Alleles of intron of the Scap locus from Helicoverpa armigera
DOI: 10.5061/dryad.2s6b3/1
title: Farmland biodiversity

description: The file contains all data used in the analyses of this paper.
DOI: 10.5061/dryad.3vc83/1
title: Fig1-A Neutral comet assay MES cell

description: Fig. 1. Effects of SMG on DNA damage and apoptosis in Rad9+/+ and Rad9-/- MES cells (A) Evaluation of DNA double strand break by neutral comet assay in Rad9+/+ and Rad9-/- MES cells cultured under 1G or SMG condition.  Time points were 1, 2, 3, 4 and 5 days. At least 50 cells for each datum were scored for comet tail moment.
DOI: 10.15156/bio/sh2697096.08fu
title: SH2697096.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.