cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27074918
title: Genome-wide investigation of caffeic acid O-methyltransferases and expression analysis under different abiotic stresses and anthracnose infection in pepper (<i>Capsicum annuum</i> L.)

description: The caffeic acid O-methyl transferases (COMTs) facilitate the biosynthesis of lignin and play important roles in many processes, including growth, development and response to stresses. Pepper (<i>Capsicum annuum</i> L.) is a major horticultural crop with significant nutritional and medicinal values. Nevertheless, a comprehensive assessment of the COMT genes in pepper and their involvement in drought, salt tolerance and anthracnose resistance remains unestablished. In the present study, 80 pepper COMT genes were identified and classified into four major groups based on domain structure and phylogenetics. Additionally, the sequence analysis, gene structures, and duplication events were analysed. The genes were unevenly distributed across 10 chromosomes, and 10 pairs of tandem and 13 pairs of segmental duplicated genes were detected in the <i>COMT</i> gene family. Examination of cis-acting regulatory elements detected the presence of phytohormone-specific, stress-receptive and light responsive elements in the pepper COMT promoters. Moreover, qRT-PCR analysis revealed significant upregulated expression of <i>CanCOMT48</i> to drought stress, <i>CanCOMT14</i> to salinity stress and <i>CanCOMT18</i> to anthracnose infection by <i>Colletotrichum truncatum</i>, suggesting their important functions in different stresses. Our results provide significant insights into the expression and probable function of selective COMTs which could be used as potential candidate genes for pepper tolerance breeding.
DOI: 10.6084/m9.figshare.27074918.v1
title: Genome-wide investigation of caffeic acid O-methyltransferases and expression analysis under different abiotic stresses and anthracnose infection in pepper (<i>Capsicum annuum</i> L.)

description: The caffeic acid O-methyl transferases (COMTs) facilitate the biosynthesis of lignin and play important roles in many processes, including growth, development and response to stresses. Pepper (<i>Capsicum annuum</i> L.) is a major horticultural crop with significant nutritional and medicinal values. Nevertheless, a comprehensive assessment of the COMT genes in pepper and their involvement in drought, salt tolerance and anthracnose resistance remains unestablished. In the present study, 80 pepper COMT genes were identified and classified into four major groups based on domain structure and phylogenetics. Additionally, the sequence analysis, gene structures, and duplication events were analysed. The genes were unevenly distributed across 10 chromosomes, and 10 pairs of tandem and 13 pairs of segmental duplicated genes were detected in the <i>COMT</i> gene family. Examination of cis-acting regulatory elements detected the presence of phytohormone-specific, stress-receptive and light responsive elements in the pepper COMT promoters. Moreover, qRT-PCR analysis revealed significant upregulated expression of <i>CanCOMT48</i> to drought stress, <i>CanCOMT14</i> to salinity stress and <i>CanCOMT18</i> to anthracnose infection by <i>Colletotrichum truncatum</i>, suggesting their important functions in different stresses. Our results provide significant insights into the expression and probable function of selective COMTs which could be used as potential candidate genes for pepper tolerance breeding.
DOI: 10.6084/m9.figshare.28351361
title: A review of strawberry under protected cultivation: yields are higher under tunnels than in the open field

description: Strawberries are grown under tunnels to protect the plants from cold, frosts, rain, and fruit diseases. A review was conducted to determine the performance of plants under plastic tunnels. Information was collected on yields and fruit weight under tunnels and in the open field (<i>n</i> = 133 experiments) and on environmental conditions in the two areas. In a global analysis, plants under tunnels had higher relative marketable (Tunnel/Open = 1.34 ± 0.76) and total yields (Tunnel/Open = 1.30 ± 0.83) than those in the open (<i>p</i> &lt; 0.001). In contrast, fruit weight was similar in the two growing areas (Tunnel/Open = 1.04 ± 0.22) (<i>p</i> = 0.094). Relative marketable yields (Tunnel/Open) were similar in plants in Northern and Southern Europe, and in Northern and Southern America (<i>p</i> &gt; 0.05). Relative marketable yields were similar in areas with cool or cold winters or with spring/summer or winter/spring production seasons, and under low or high tunnels (<i>p</i> &gt; 0.05). Lower yields under tunnels were associated with low light levels and high temperatures under the plastic and a higher incidence of powdery mildew. The use of tunnels under global warming will require attention to ventilation under the covers.
DOI: 10.6084/m9.figshare.28351361.v1
title: A review of strawberry under protected cultivation: yields are higher under tunnels than in the open field

description: Strawberries are grown under tunnels to protect the plants from cold, frosts, rain, and fruit diseases. A review was conducted to determine the performance of plants under plastic tunnels. Information was collected on yields and fruit weight under tunnels and in the open field (<i>n</i> = 133 experiments) and on environmental conditions in the two areas. In a global analysis, plants under tunnels had higher relative marketable (Tunnel/Open = 1.34 ± 0.76) and total yields (Tunnel/Open = 1.30 ± 0.83) than those in the open (<i>p</i> &lt; 0.001). In contrast, fruit weight was similar in the two growing areas (Tunnel/Open = 1.04 ± 0.22) (<i>p</i> = 0.094). Relative marketable yields (Tunnel/Open) were similar in plants in Northern and Southern Europe, and in Northern and Southern America (<i>p</i> &gt; 0.05). Relative marketable yields were similar in areas with cool or cold winters or with spring/summer or winter/spring production seasons, and under low or high tunnels (<i>p</i> &gt; 0.05). Lower yields under tunnels were associated with low light levels and high temperatures under the plastic and a higher incidence of powdery mildew. The use of tunnels under global warming will require attention to ventilation under the covers.
DOI: 10.6084/m9.figshare.27211690
title: Identification of the DEAD-box gene family and expression analysis of abiotic stress in potatoes

description: Unwinding enzymes are a group of highly conserved enzymes that play important roles in plant growth and development as well as in adverse and stress conditions. The DEAD-box family represents the largest subfamily of deconjugating enzymes. However, little research has been conducted on the DEAD-box RNA gene family (<i>StRH</i>) in potato. Identifying and screening members of the DEAD-box gene family in potato could help us to better understand the response of potatoes to adverse and stress conditions and the related tolerance mechanisms. We identified a total of 73 DEAD-box gene family members from the potato genome-wide database. A comprehensive bioinformatics study of the potato DEAD-box family was carried out by a range of analytical methods. The evolutionary tree demonstrated that the potato DEAD-box family was divided into five distinct taxa. Three pairs of segmental repeats were identified on the chromosomes. In addition, we selected nine DEAD-box genes for qPCR(Quantitative Real-time PCR), and the results indicated that all of these genes were involved in both the ABA hormone stress and drought stress. These findings may help to increase our understanding of the functional diversity of the potato DEAD-box gene family under different environmental stresses.
DOI: 10.6084/m9.figshare.27211690.v1
title: Identification of the DEAD-box gene family and expression analysis of abiotic stress in potatoes

description: Unwinding enzymes are a group of highly conserved enzymes that play important roles in plant growth and development as well as in adverse and stress conditions. The DEAD-box family represents the largest subfamily of deconjugating enzymes. However, little research has been conducted on the DEAD-box RNA gene family (<i>StRH</i>) in potato. Identifying and screening members of the DEAD-box gene family in potato could help us to better understand the response of potatoes to adverse and stress conditions and the related tolerance mechanisms. We identified a total of 73 DEAD-box gene family members from the potato genome-wide database. A comprehensive bioinformatics study of the potato DEAD-box family was carried out by a range of analytical methods. The evolutionary tree demonstrated that the potato DEAD-box family was divided into five distinct taxa. Three pairs of segmental repeats were identified on the chromosomes. In addition, we selected nine DEAD-box genes for qPCR(Quantitative Real-time PCR), and the results indicated that all of these genes were involved in both the ABA hormone stress and drought stress. These findings may help to increase our understanding of the functional diversity of the potato DEAD-box gene family under different environmental stresses.
DOI: 10.5683/sp3/dmikgh
title: Replication Data for: Ice age refugium shows potential of geohistorical data to guide modern conservation efforts

description: This repository contains the code and data required to replicate Figures 3, 4, S1, and S2, and Movies S1-S3 for the manuscript entitled "Ice age refugium shows potential of geohistorical data to guide modern conservation efforts." Also contains the code required to perform the Monte Carlo simulation used to calculate the probability of a refugium explaining the regional decline and recovery in spruce incidence. Manuscript summary: Many biologists regard refugia as locations that shelter a population during an environmental crisis, thus facilitating post-crisis ecological recovery. However, identifying refugia based on short-term contraction and survivorship alone is problematic as this approach fails to account for whether the species survives and recovers in the long-term. Protecting refugia that are unstable in the long-term could lead to wasted conservation efforts and the species’ extinction. Here, we present a novel method for identifying geohistorical refugia that emphasizes a population’s long-term success and post-crisis recovery. To test this method’s utility, we present a case-study using pollen data for three ecologically distinct plant taxa from lake cores over the past 20 kyr in northern Alaska, USA. Using Monte Carlo methods, we found a statistically significant decrease in spruce incidence across the study region between 13.0 – 10.0 ka. During this interval, spruce persisted at relatively high abundance in one locality that may have provided the cool, humid conditions necessary for spruce survival during an interval of warmer, drier regional climate. This locality acted as the center for post-crisis re-expansion after the warm, dry conditions passed, indicating that this location was likely a refugium. If successful geohistorical refugia can be identified, subsequent analyses should aim to identify which environmental conditions allowed the population to survive within the refugium and re-expand after the crisis, thus providing critical information for policymakers when identifying locations for successful, long-term protected areas in the face of the ongoing biodiversity crisis.
description: R, 4.3.2
DOI: 10.5281/zenodo.18245724
title: Effects of a Propolis-based Diet on Fatty acids, Cuticular Hydrocarbons, and Immune System in Worker Honey Bees (Apis mellifera)

description: Data collected in laboratory tests to evaluate the effects of propolis consumption on different physiological parameters in adult worker bees of the species Apis mellifera
DOI: 10.5281/zenodo.18245723
title: Effects of a Propolis-based Diet on Fatty acids, Cuticular Hydrocarbons, and Immune System in Worker Honey Bees (Apis mellifera)

description: Data collected in laboratory tests to evaluate the effects of propolis consumption on different physiological parameters in adult worker bees of the species Apis mellifera
DOI: 10.5281/zenodo.18322789
title: Dataset for "Tunneling signatures of interband coherence in dilute exciton condensates"

description: The raw data for the paper "Tunneling signatures of interband coherence in dilute exciton condensates", containing results of a mean-field calculation.

Monolayer data are included in monolayer-data.hdf5, and have been used to generate Figs.2,3. 

Bilayer data are included in monolayer-data.hdf5, and have been used to generate Fig. 4. 

The variable "sp_E_G" in the index of "data" corresponds to the semiconductor gap used as input, in units of excitonic Rydberg Ry*.

The field "k_points" gives the values of the momentum points of the momentum grid in units of 1/a_B^*.

Finally, the field "energies" gives the energies of each band corresponding to each "k_point". 

Finally, the field "Ps" gives the projector on each band of the mean-field solution.
DOI: 10.5281/zenodo.18322790
title: Dataset for "Tunneling signatures of interband coherence in dilute exciton condensates"

description: The raw data for the paper "Tunneling signatures of interband coherence in dilute exciton condensates", containing results of a mean-field calculation.

Monolayer data are included in monolayer-data.hdf5, and have been used to generate Figs.2,3. 

Bilayer data are included in monolayer-data.hdf5, and have been used to generate Fig. 4. 

The variable "sp_E_G" in the index of "data" corresponds to the semiconductor gap used as input, in units of excitonic Rydberg Ry*.

The field "k_points" gives the values of the momentum points of the momentum grid in units of 1/a_B^*.

Finally, the field "energies" gives the energies of each band corresponding to each "k_point". 

Finally, the field "Ps" gives the projector on each band of the mean-field solution.
DOI: 10.15468/dl.wqv6d5
title: Occurrence Download

description: A dataset containing 11459 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "OccurrenceStatus is Present",
 "TaxonKey is Acanthus mollis"
 ]
}

 The dataset includes 11459 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002485-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18315725
title: Dataset of Fatigue behaviour of the TiAlV alloy used in biomedical applications: case study

description: The dataset contains data related to an article focused on the fatigue behaviour of the additively manufactured Ti6Al4V-ELI alloy, which is mainly used for biomedical applications such as implants and prosthetics.
DOI: 10.5281/zenodo.18315726
title: Dataset of Fatigue behaviour of the TiAlV alloy used in biomedical applications: case study

description: The dataset contains data related to an article focused on the fatigue behaviour of the additively manufactured Ti6Al4V-ELI alloy, which is mainly used for biomedical applications such as implants and prosthetics.
DOI: 10.15468/dl.c94mbn
title: Occurrence Download

description: A dataset containing 949 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is USA.47_1",
 "Year 2026-2026"
 ]
}

 The dataset includes 949 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002486-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e244535v1
title: College of Nursing Sciences, Waterside, Onitsha, Anambra State, 2026/2027 ADMISSION FORM is out call 09031383306 DR MR JAMES (+249031383306) for TRANSCRIPT Collection School Admin Line 09031383306 To apply Also 2026/2027 Nursing form

description: College of Nursing Sciences, Waterside, Onitsha, Anambra State, 2026/2027 ADMISSION FORM is out call 09031383306 DR MR JAMES (+249031383306) for TRANSCRIPT Collection School Admin Line 09031383306 To apply Also 2026/2027 Nursing form
DOI: 10.6084/m9.figshare.31112776
title: Supplementary Material for: Early-life Factors and Risk of Brain Arteriovenous Malformations: A Prospective Cohort Study

description: Abstract
Objective: The pathophysiological basis of brain arteriovenous malformations (bAVMs) remains incompletely understood. Early-life factors are hypothesized to influence cerebrovascular development, however, their potential associations with bAVMs have not been systematically evaluated. This study aimed to investigate the associations between eight early-life factors and the risk of bAVMs.
Methods: This prospective cohort study included 329,121 participants aged 40 to 69 years from the UK Biobank with complete covariate data at baseline. Multiple-adjusted logistic regression models were used to explore the associations between eight self-reported early-life factors (breastfed as a baby, part of a multiple birth, maternal smoking around birth, comparative body size at age 10, handedness, childhood sunburn occasions, number of older siblings, and birth weight) and subsequent diagnosis of bAVMs.
Results: A total of 141 patients had diagnosed bAVMs. After multivariable adjustment, three early-life factors were associated with an increased risk of bAVMs: very low birth weight (&lt;1.5 kg vs. 2.5–4.0 kg: odds ratio [OR], 3.27; 95% confidence internal [CI], 1.04–10.67), having one or more older siblings (≥1 person vs. none: OR, 1.83; 95%CI, 1.03–3.24), and frequent childhood sunburn (&gt;10 episodes vs. none: OR, 2.83; 95%CI, 1.13–7.08). No statistically significant associations were observed in other early-life factors. Sensitivity analyses confirmed the robustness of these findings.
Conclusions: In this large prospective cohort, very low birth weight, the presence of older siblings, and repeated childhood sunburn were associated with a higher risk of bAVMs. These findings warrant validation and further investigation into the underlying biological mechanisms.
DOI: 10.6084/m9.figshare.31112776.v1
title: Supplementary Material for: Early-life Factors and Risk of Brain Arteriovenous Malformations: A Prospective Cohort Study

description: Abstract
Objective: The pathophysiological basis of brain arteriovenous malformations (bAVMs) remains incompletely understood. Early-life factors are hypothesized to influence cerebrovascular development, however, their potential associations with bAVMs have not been systematically evaluated. This study aimed to investigate the associations between eight early-life factors and the risk of bAVMs.
Methods: This prospective cohort study included 329,121 participants aged 40 to 69 years from the UK Biobank with complete covariate data at baseline. Multiple-adjusted logistic regression models were used to explore the associations between eight self-reported early-life factors (breastfed as a baby, part of a multiple birth, maternal smoking around birth, comparative body size at age 10, handedness, childhood sunburn occasions, number of older siblings, and birth weight) and subsequent diagnosis of bAVMs.
Results: A total of 141 patients had diagnosed bAVMs. After multivariable adjustment, three early-life factors were associated with an increased risk of bAVMs: very low birth weight (&lt;1.5 kg vs. 2.5–4.0 kg: odds ratio [OR], 3.27; 95% confidence internal [CI], 1.04–10.67), having one or more older siblings (≥1 person vs. none: OR, 1.83; 95%CI, 1.03–3.24), and frequent childhood sunburn (&gt;10 episodes vs. none: OR, 2.83; 95%CI, 1.13–7.08). No statistically significant associations were observed in other early-life factors. Sensitivity analyses confirmed the robustness of these findings.
Conclusions: In this large prospective cohort, very low birth weight, the presence of older siblings, and repeated childhood sunburn were associated with a higher risk of bAVMs. These findings warrant validation and further investigation into the underlying biological mechanisms.
DOI: 10.3886/e244538v1
title: College of Nursing Sciences,NAUTH, Nnewi, Anambra State, 2026/2027 ADMISSION FORM is out call 09031383306 DR MR JAMES (+249031383306) for TRANSCRIPT Collection School Admin Line 09031383306 To apply Also 2026/2027 Nursing form

description: College of Nursing Sciences,NAUTH, Nnewi, Anambra State, 2026/2027 ADMISSION FORM is out call 09031383306 DR MR JAMES (+249031383306) for TRANSCRIPT Collection School Admin Line 09031383306 To apply Also 2026/2027 Nursing form
DOI: 10.6084/m9.figshare.31112782
title: Supplementary Material for: Modifiers in Effects of Combined Pharmacotherapy and Psychotherapy versus Pharmacotherapy Alone for Adult Depression: An Individual Participant Data Meta-analysis

description: Introduction: It is not clear which individual-patient- and study-level variables modify the effects in the comparison of combined treatment versus pharmacotherapy alone for adult depression.
Methods: Randomized trials comparing combined treatment with pharmacotherapy alone were identified on September 1st, 2024, and individual participant data (IPD) requested from the authors. One-stage IPD meta-analyses were conducted to estimate effects on depressive symptoms at post-treatment and follow-up, response, remission, and reliable improvement, and to assess effect modifiers.
Results: Of 75 eligible studies, 31 (41.33%) provided their IPD (3703 participants). Combined treatment was more effective in reducing depressive symptoms at post-treatment (SMD = 0.45, 95%CI: 0.27 to 0.64), six- (SMD = 0.55, 95%CI: 0.25 to 0.85) and twelve-month follow-up (SMD = 0.22, 95%CI: 0.02 to 0.43). The effect size was smaller in studies that provided IPD than in those that did not. No patient-level effect modifiers were identified. No difference between the two arms was found in studies using SSRIs (as opposed to other antidepressants) and recruiting specific target groups (versus unselected adult populations), and the difference between combined treatment and pharmacotherapy alone was larger if pharmacotherapy was not administered adequately, but these findings were not confirmed in sensitivity analyses. Several patient-level characteristics predicted higher depressive symptoms at post-treatment, regardless of treatment condition.
Conclusion: Combined treatment outperforms pharmacotherapy alone regardless of individual characteristics. Thus, its delivery does not have to be limited to specific patient subgroups. However, IPD were available for only 41% of eligible studies, thus limiting this sample’s representativeness.