cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/k4wnrmvs2z.1
title: Appeasing yourself or others? The use of self-punishment and compensation and how it influences punishment

description: This paper analyzes experimental data to better understand self-punishment and compensation as potential means for making amends for having caused distributional harm and inefficiency. Our design allows for and disentangles intended harm and unintended harm. In our data, subjects infrequently self-punish, whereas they frequently offer compensation. Appeasement tactics are used particularly when the harmed party can punish the harm doer. Compensation is an informative signal for the harm doer’s benign intent, which does not similarly apply to self-punishment. Both self-punishment and compensation lower the punishment level imposed by the harmed party on the harm doer, whereas results regarding the probability of punishment are less clear.
DOI: 10.17632/swfymb4mzj.1
title: LINF_350023900

description: 60S ribosomal protein L5; Leishmania infantum
DOI: 10.17632/tmvmzbs6f8.1
title: LINF_350023800

description: 60S ribosomal protein L5; Leishmania infantum
DOI: 10.17632/js4zcpbjnk.1
title: LINF_350023700

description: 60S ribosomal protein L5; Leishmania infantum
DOI: 10.17632/nhzcd4y57v.1
title: DsbA-L interacts with VDAC1 in mitochondrion-mediated tubular cell apoptosis and contributes to the progression of AKI

description: Original image data
DOI: 10.17632/6j9m3sgc3x.1
title: Data recorded/collated for Evaluation of changes in some physico-chemical properties of bottled water exposed to sunlight in Bauchi State, Nigeria

description: This data is from the study (Evaluation of changes in some physico-chemical properties of bottled water exposed to sunlight in Bauchi State, Nigeria) which shows levels of pH, Bisphenol A (ppb or µg/L), Nitrate (mg/L), Antimony (ppb or µg/L), Temperature (degrees Centigrade) and number of days before sampling. The dataset is provided as .csv. The dataset was analysed in R and charts/figures were generated from there.
DOI: 10.17632/pc773fty8m.1
title: Tuberculosisdata

description: time to early TB treatment interruption among newly diagnosed TB patients
DOI: 10.17632/7r2ckfp45h.2
title: Processed Data for Percolation-based Image Processing for the Plastic Viscosity of Cementitious Mortar with Super Absorbent Polymer

description: 1. The measurement data from the rheology expriments on the Viscosity, Speed and Torque with various percentage of Super Absorbent Polymer. 2. The visual acquisition of the viscosity data from the litrature and the corresponding graph for validation of the in-house experimntalmeasurements.
DOI: 10.17632/cg8nxtkf94.2
title: Evaluation of new radio occultation observation among small satellites on Venus by data assimilation

description: Data for Fujisawa et al. (2021), GRL, submitted.
DOI: 10.17632/btjsmfg5nz.1
title: First report of Synergism Activity between Moringa oleifera and Azadirachta indica Crude Extract against Nilaparvata lugens

description: This research aims to evaluate the synergism activity of M. oleifera and A. indica extract against N. lugens. Data showed in the paper are the mortality data, lethal concentration or LC50 values and combination index values.
DOI: 10.17632/gkxyczvbvv.1
title: Tao Li

description: Synbiotic yogurt containing konjac mannan oligosaccharides and Bifidobacterium animalis ssp. lactis BB12 alleviates constipation in mice by modulating the stem cell factor (SCF)/c-Kit pathway and gut microbiota
DOI: 10.17632/bm9tptphmt.1
title: Shock waves for a converging-diverging nozzle and for a rocket

description: The project is about studying the whole rocket. The work is based on comparing between analytical and theory results on the converging diverging (C-D) nozzle, also called the Laval nozzle for an isentropic flow, a normal shock wave in the diverging section, an oblique shock wave and an expansion at the exit. Then a simulation of the flow at the upper surface of the rocket by CFD will be made, considering the upper area as diamond shaped. The aim of the simulation is to show the oblique shock wave created by supersonic speed and doesn’t intersect with the rest of the rocket, reducing overall the drag
DOI: 10.17632/d5zczmmd52.3
title: Nomograms for predicting progression-free survival and overall survival after surgery and concurrent chemoradiotherapy for glioblastoma: a retrospective cohort study

description: All data were statistically analyzed using R, version 3.5.2. The data can be run directly in R.
DOI: 10.17632/4bj84x6kcy.1
title: Neuronal non-CG methylation is an essential target for MeCP2 function Tillotson et al
DOI: 10.17632/2bh8fmt97y.1
title: Pentobarbital oral suspension in Syrspend SF Alka

description: Stability data of extemporaneous oral suspension of pentobarbital in Syrspend SF Alka for imaging sedation procedure
DOI: 10.17632/v4ynw83j6k.2
title: Synthetic Datasets of Water Consumptions

description: A group of 6 synthetic datasets is provided with a 914 days water consumption time horizon with structural breaks based on actual datasets from a hotel and hospital. The parameters of the best-fit probability distributions to the actual water consumption data were used to generate these datasets. The distributions used that best fit the datasets used were the gamma distribution for the hotel data set and the gamma and logistics distribution for the hospital dataset. Two structural breaks of 5% and 10% in the mean of the distributions were added to simulate reductions in water consumption patterns.
DOI: 10.17632/rrm4rkr3xn.1
title: Probability waves: adaptive cluster-based correction by convolution of p-value series from mass univariate analysis

description: dataset and Octave/MatLab codes/scripts for data analysis Background: Methods for p-value correction are criticized for either increasing Type II error or improperly reducing Type I error. This problem is worse when dealing with thousands or even hundreds of paired comparisons between waves or images which are performed point-to-point. This text considers patterns in probability vectors resulting from multiple point-to-point comparisons between two event-related potentials (ERP) waves (mass univariate analysis) to correct p-values, where clusters of signiticant p-values may indicate true H0 rejection. New method: We used ERP data from normal subjects and other ones with attention deficit hyperactivity disorder (ADHD) under a cued forced two-choice test to study attention. The decimal logarithm of the p-vector (p') was convolved with a Gaussian window whose length was set as the shortest lag above which autocorrelation of each ERP wave may be assumed to have vanished. To verify the reliability of the present correction method, we realized Monte-Carlo simulations (MC) to (1) evaluate confidence intervals of rejected and non-rejected areas of our data, (2) to evaluate differences between corrected and uncorrected p-vectors or simulated ones in terms of distribution of significant p-values, and (3) to empirically verify rate of type-I error (comparing 10,000 pairs of mixed samples whit control and ADHD subjects). Results: the present method reduced the range of p'-values that did not show covariance with neighbors (type I and also type-II errors). The differences between simulation or raw p-vector and corrected p-vectors were, respectively, minimal and maximal for window length set by autocorrelation in p-vector convolution. Comparison with existing methods: Our method was less conservative while FDR methods rejected basically all significant p-values for Pz and O2 channels. The MC simulations, gold-standard method for error correction, presented 2.78±4.83% of difference (all 20 channels) from p-vector after correction, while difference between raw and corrected p-vector was 5,96±5.00% (p = 0.0003). Conclusion: As a cluster-based correction, the present new method seems to be biological and statistically suitable to correct p-values in mass univariate analysis of ERP waves, which adopts adaptive parameters to set correction.
DOI: 10.17632/wz6jkfdy48.1
title: Sequences data for: "Characterization of bacterial communities of Cold Smoked Salmon during storage"

description: Sequences data linked to the article "Characterization of bacterial communities diversity of Cold Smoked Salmon during storage" DOI:
DOI: 10.17632/xzwnpjyzwj.1
title: Perceptions of the Pandemic: Impact of COVID-19 in Medical Education

description: Data for survey responses and questionnaire by faculty/staff and students on their perception of the COVID pandemic. Data was acquired in April and June 2020 at Rocky Vista University Colorado and Utah campuses.
DOI: 10.17632/bxrwgtynp6.1
title: Eexperimental data on fracture of open-hole composite laminates subjected to tension loading

description: In this data, we present detailed failure process of big open-hole carbon fiber reinforced polymer (CFRP) composite laminates subjected to tension loading, which are tested by digital image correlation (DIC) system and electrical strain gauge system. Data of three different lay-ups which applied tension loading until specimens’ failure are included. Several strain gauges are distributed in different locations of specimens to measure strains during loading, and data of strain gauges and load-displacement curve are also attached in this excel
DOI: 10.17632/j8fmdwd4jp.2
title: Using a repeated measure mixed model for handling missing cost and outcome data in clinical trial-based cost-effectiveness analysis

description: Code for analysis of missing data
DOI: 10.17632/r93jptbhr2.1
title: LXR stimulates a metabolic switch and reveals cholesterol homeostasis as a statin-target against Tasmanian Devil Facial Tumor Disease

description: This is raw experimental data (western-blots) available for the publication "LXR stimulates a metabolic switch and reveals cholesterol homeostasis as a statin-target against Tasmanian Devil Facial Tumor Disease."
DOI: 10.17632/phxtv76n5s.2
title: AMBER force field parameters of 160 organic molecules for MD simulations using GROMACS

description: General AMBER force field (GAFF) parameters are provided for 160 organic molecules including drugs, natural products, and steroids, which can be employed without further processing in molecular dynamics (MD) simulations using GROMACS. The parameters were determined based on quantum mechanical (QM) calculations involving geometry optimization at the HF6-31G* level of theory. For each molecule a coordinate file of the three-dimensional molecular structure, the topology and the parameter file are provided. The applicability of these parameters was demonstrated by MD simulations for each of these molecules.
DOI: 10.17632/r5r3j856fs.1
title: Source, transport and fate of terrestrial organic carbon from Yangtze River during a large flood event: Insights from multiple-isotopes (delta 13C, delta 15N, delta 14C) and geochemical tracers

description: Data, including Al/Si, Corg, N/C, δ13C, and δ15N, in eight sediment cores and surface sediments (SS) collected from the Yangtze River Estuary was used for comparison analysis.
DOI: 10.17632/x5rf9gs4jc.1
title: Kaji_EICont

description: supervisor of this study
DOI: 10.17632/vm5msmw257.1
title: Health-related spam images

description: 300 labeled images collected from Twiiter Arabic hashtags and used for fine-tuning a text loclization (pixel_link) part of OCR system. The datasets were used in our published paper "Detecting Spam Images with Embedded Arabic Text in Twitter".
DOI: 10.17632/3pzwsmgbk6.1
title: Providing a view for toxicity mechanism of tetracycline by analysis of the connections between metabolites and biologic endpoints of wheat

description: Metabolomics is an implement for testing the toxicity of antibiotics, and provides a comprehensive view of the overall response to stress; however, the connections between metabolites and biologic endpoints keep unclear in response to antibiotics. In this study, wheat seeds were exposed to tetracycline for five days. The results proved that tetracycline restrained growth, reduced chlorophyl and carotinoid contents and cell permeability, and increased reactive oxygen species (ROS) levels and malondialdehyde (MDA) content. Orthogonal partial least squares (OPLS) was used to analyze the connections between metabolites and biologic endpoints, which discovered that 11 metabolic pathways were significantly affected by tetracycline, and amino acid metabolism could largely apply to root growth and ROS accumulation, while carbohydrate metabolism could have a ruling effect on tetracycline-induced cell permeability. 13 metabolites all played active roles in mediating tetracycline’s effects on root length, root fresh weight and cell permeability but had no significant effects on ROS levels. The majority of metabolites with passive effects on root length, root fresh weight and cell permeability had active effects on ROS levels. These results offer a view about stress reaction of wheat to tetracycline.
DOI: 10.17632/8gfdfdkkg5.1
title: The long road to democracy: Does the demand for democracy affect its actual level?

description: Data used for model estimation in the "The long road to democracy: Does the demand for democracy affect its actual level?" article. The data come from open sources: World Values Survey, Worldwide Governance indicators and World Bank Development Indicators. The file contains both data files and R codes that were used for model estimation.
DOI: 10.17632/7ymx28z3km.1
title: Emmanuel Mgimwa

description: Introduction The influence of physical-chemical variables on phytoplankton and lesser flamingo (Phoeniconaias minor) abundances have been studied in the East African Rift Valley Soda lakes such as Bogoria (Ballot et al., 2004, Schagerl & Oduor 2008, Tebbs et al., 2013, & Robinson, 2015), Nakuru (Ballot et al., 2004, Schagerl & Oduor 2008, Robinson 2015, & Krienitz et al., 2016), Elementaita (Ballot et al., 2004, Schagerl & Oduor 2008, Robinson, 2015), Oloidien (Robinson, 2015) and Manyara (Kihwele et al., 2014). However, there are no studies on the influence of physical-chemical variables on phytoplankton and lesser flamingo abundances at lake Natron despite being the only important and regular breeding area for the East African lesser flamingo populations (Baker & Baker 2002, & Wildlife Division, 2010). Although migration and erratic movements of lesser flamingo has been documented (Baker 1997, & Baker & Baker, 2002), a sizeable number of flamingos has been found to stay at lake Natron throughout the year. The migrating lesser flamingos spend time at lake Natron before and after the breeding season (October - February but can breed throughout the year if conditions are favourable) making it important to understand the productivity levels of the phytoplankton and the underlying physical-chemical variables. This study investigated the relationship of the lesser flamingo and phytoplankton abundances and how the physical-chemical variables (dissolved oxygen, water turbidity, pH, nitrate (NO3-), ammonium (‎NH4+) and phosphate (PO43-)) affect Chlorophyll-a abundance at lake Natron. The study used Chlorophyll-a as a measure of phytoplankton and selected physical-chemical variables with the greatest influence on the phytoplankton's primary productivity. Conclusion Findings from this study suggest that annual fluctuation in the lesser flamingos numbers in lake Natron is triggered by phytoplankton abundance whose primary productivity is influenced by physical-chemical variables in the lake waters. In turn, these changes are mainly due to both anthropogenic activities and weather changes within the lake basin and its surroundings. The observed trend in physical-chemical variables at the three study lagoons is a result of the spatial distribution of freshwater sources from Pinyinyi, Engaresero and Ewaso Ng’iro rivers and the dilution effect from rainfall and evaporation. The importance of the hydrological balance for the productivity of lake Natron is of paramount for the survival of the lesser flamingos. Being a closed (no river flowing from this lake) and transboundary ecosystem, any hydrological changes will impact the limnology and, in turn affect phytoplankton productivity.
DOI: 10.17632/j87c9jshxy.1
title: Diagnostic performance of artificial intelligence for histologic melanoma recognition compared to 18 international expert pathologists: Supplementary Material

description: The study was designed to compare the performance of classifiers based on image analyses by convolutionnal neural networks (CNNs) with that of 18 expert dermatopathologists in a binary classification task for pigmented skin lesions. Mendeley Supplementary Figure 1 shows a schematic representation of the testing approach. The CNNs were trained by cross-testing. Each iteration consists of five folds. Orange rectangles represent the folds used for testing and blue rectangles represent folds for training. For each iteration a CNN is trained and tested on the respective folds. Each trained CNN has a performance that is determined on the fold. To calculate the overall performance, the sum of all 5 performances is taken. This procedure was repeated 3 times and the results were combined to generate an ensemble. Mendeley Supplementary Figure 2 depicts the whole slide image (WSI) analysis. Tissue sections on whole slide images (top) were divided into tiles (middle). The CNN (a pre-trained ResNeXt50) assigned a malignancy score to every individual tile (bottom). Red tiles were classified as melanoma, blue tiles as nevus. Scores for all tiles on one image were averaged to a final malignancy score for the complete slide. Supplementary Table 1 shows the characteristics of the pigmented skin lesions included in the test set. Supplementary Table 2 provides an analysis of statistical differences between the performance of pathologists and CNN classifiers.
DOI: 10.17632/97brdz5339.1
title: Dr

description: The raw data and code accompanies the manuscript: K. Andraka, K. Kondrakiewicz, K. Rojek-Sito, K. Ziegart-Sadowska, K. Meyza, T. Nikolaev, A. Hamed, M. Kursa, M. Wójcik, K. Danielewski, M. Wiatrowska, E. Kublik, M. Bekisz, T. Lebitko, D. Duque, T. Jaworski, H. Madej, W. Konopka, P. M. Boguszewski, E. Knapska "Central amygdala circuits activated by social stimuli indicating imminent vs remote danger promote different defensive behaviors"
DOI: 10.17632/vs899t86tv.1
title: Panel data OECD and BRICS power sector policy paper dataset - 2000-2018

description: This dataset contains the variables used in this power sector policy paper, expect CO2 emission intensity (IEA database) data due to IEA licensing agreement as the product was purchased from them. The dataset contains data on 34 OECD countries (while the analysis only included 34) and 5 BRICS countries, from 2000 - 2018. The variables used in the analysis are: - CO2 emission intensity per KWh (Data not included due to copy right from IEA, 3 example data points included for refererence). - Emission trading system price, both national and with adjusted price by relative size for sub-national systems (Cross-referenced from several sources). - Feed-in tariffs for solar PV and wind (OECD.Stat database). - Public environmental R&D and patent data on climate change mitigation technologies related to (1) energy generation, transmission or distribution (OECD.Stat green growth database). - Industrial energy consumption (OECD.Stat database). - GDP per capita, Industry share of GDP, Residental electricity consumption (World bank indicators). - Installed renewable energy capacity (IRENA database).
DOI: 10.17632/dchzpj7p6j.1
title: A novel mutation in the TP63 gene

description: Cleft lip with or without cleft palate (CL/P) is the most common craniofacial anomaly with a high incidence of live births. The specific pathogenesis of CL/P is still unclear, although plenty of studies have been conducted. Variations of tumor protein 63 (TP63) was reported to be related to the phenotype of CL/P. A Chinese pedigree with CL/P was collected. The proband is a 3-year-old boy with the phenotype of CL/P, while his development and intelligence are normal. The proband's uncle and grandmother both have the phenotype of cleft lip and cleft palate. Cytogenetic analysis and chromosomal microarray analysis (CMA) were performed, followed by whole exome sequencing (WES) and sanger validation. Analysis of WES revealed a variant of C&gt;T at nucleotide position 1324 (1324C&gt;T) of TP63 gene, possibly producing a truncated protein with a premature stop codon at amino acid position 442 (p.Q442*). This mutation was localized at the oligomerization domain (OD) of TP63 and might impair the capacity of p63 oligomerization. This c.1324C&gt;T (p.Q442*) mutation of TP63 was not reported in literature before and also not found in NCBI dbSNP, genome AD, ExAC, and 1000 human genome dataset. Confirmation of Sanger sequencing was consistent with that of the WES. In summary, this mutation can be interpreted as Likely Pathogenic according to ACMG guidelines.
DOI: 10.5517/ccdc.csd.cc24w5bk
title: CCDC 1992318: Experimental Crystal Structure Determination

description: Related Article: Anna Mlodzianowska, Armin Berndt, Gertraud Geiseler, Werner Massa|2020|CSD Communication|||
DOI: 10.17632/syxd4b7443.1
title: Accessing various means for Classroom Engagement to justify the need of Gamification

description: This data set consists of records of survey conducted for identifying the need for gamification in comparison to our present education system. Gamification is a vast concept of changing the non-gaming environment into a gaming environment and now it's time to bring change to our present Indian education system.
DOI: 10.17632/2rr85gkv5s.1
title: UBD Herbarium - Dataset of Intact Leaves for Reconstruction

description: This dataset consists of a total of 2933 augmented individual intact herbarium leaves with a uniform background collected from Universiti Brunei Darussalam Herbarium (UBDH). These leaves were automatically extracted using a deep learning pipeline consisting of semantic segmentation model, connected component analysis and a single-leaf classifier trained on binary images to automatically detect intact leaves. All leaves were collected from ten different plant families namely Anacardiaceae, Annonaceae, Dipterocarpaceae, Ebenaceae, Euphorbiaceae, Malvaceae, Phyllanthaceae, Polygalaceae, Rubiaceae and Sapotaceae. Family Name Training Validation Testing Anacardiaceae 209 29 61 Annonaceae 199 28 58 Dipterocarpaceae 202 28 59 Ebenaceae 201 30 60 Euphorbiaceae 207 29 61 Malvaceae 207 29 61 Phyllanthaceae 210 30 60 Polygalaceae 200 28 58 Rubiaceae 205 29 60 Sapotaceae 200 28 58 Total 2040 288 596 Reconstruction of damaged herbarium leaves using deep learning techniques for improving classification accuracy, Ecological Informatics Available online 2 February 2021, 101243, https://doi.org/10.1016/j.ecoinf.2021.101243
DOI: 10.17632/dgpch66rb7.1
title: JAAD_Measurement and prediction of the severity of post-inflammatory dyspigmentation after resolution of psoriatic plaques in patients treated with biologic therapy

description: Supplement_JAAD_Measurement and prediction of the severity of post-inflammatory dyspigmentation after resolution of psoriatic plaques in patients treated with biologic therapy