cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.yutwbp
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hylodes dactylocinus Pavan, Narvaes & Rodrigues, 2001"
 ]
}

 The dataset includes 20 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003940-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4et7z
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acipenser schrenckii Brandt, 1869"
 ]
}

 The dataset includes 40 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003942-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8qcjj8
title: Occurrence Download

description: A dataset containing 122797933 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 122797933 records from 11280 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003927-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1zn397
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Adesmia rubroviridis Burkart"
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030761-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g5p5ze
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astragalus chrysostachys Boiss."
 ]
}

 The dataset includes 83 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027319-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.22hupv
title: Occurrence Download

description: A dataset containing 214 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is January",
 "TaxonKey is Aphis gossypii Glover, 1877"
 ]
}

 The dataset includes 214 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0168795-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.72vc5h
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Boophis feonnyala Glaw, Vences, Andreone & Vallan, 2001"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027330-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jbdctu
title: Occurrence Download

description: A dataset listing the 158878 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Reynoutria japonica Houtt."
 ]
}

 The dataset's 158878 records were derived from 519 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030761-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t42hwn
title: Occurrence Download

description: A dataset containing 857531 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lolium L."
 ]
}

 The dataset includes 857531 records from 1261 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0168791-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qtreuv
title: Occurrence Download

description: A dataset containing 3732 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhynchosia minima",
 "Continent is Africa"
 ]
}

 The dataset includes 3732 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042731-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.62eczw
title: Occurrence Download

description: A dataset containing 427 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((17.938539 -30.189747, 17.932832 -30.139290, 17.868394 -30.139290, 17.874081 -30.189747, 17.938539 -30.189747))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 427 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042733-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dy9yw4
title: Occurrence Download

description: A dataset containing 224 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.68467 43.11424,10.13305 43.12795,9.77863 44.33364,8.89851 44.57554,7.85161 44.29109,7.68467 43.11424))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Ziphius cavirostris"
 ]
}

 The dataset includes 224 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042732-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17873373
title: Data, Analysis, and Modeling for Henney et al. (2025)

description: Observational data, analysis, and modeling that forms the basis of the paper:

Kinematics and physical structure of Ou 5: A bipolar planetary nebula with extreme abundance discrepancy and an eclipsing binary core

Henney et al., MNRAS in press, 2025

 
description: data/ contains mainly FITS files



data/originals is the full set of original files from Teresa.



It is not included in the repo for space reasons but is available at this Google Drive link.



data/first-look is the initial partially reduced spectra from Teresa for reference



Also includes a PDF showing the slit positions.





docs/ contains documentation



pn-ou5-physics contains most of the work that is not in notebooks

pn-ou5-pipeline describes all the steps in the initial data reduction

pn-ou5-admin describes setting up the python virtual environment, etc



notebooks/ contains lots of jupyter notebooks

mes-longslit/ contains python source code for library functions that are used in the notebooks

pyproject.toml specifies the dependencies for use with uv or other package manager

cloudy/ contains input and output files from the Cloudy models

cspn-tables/ contains third-party post-agb evolutionary tracks (from Miller Bertolami and from MIST)
DOI: 10.5281/zenodo.17873374
title: Data, Analysis, and Modeling for Henney et al. (2025)

description: Observational data, analysis, and modeling that forms the basis of the paper:

Kinematics and physical structure of Ou 5: A bipolar planetary nebula with extreme abundance discrepancy and an eclipsing binary core

Henney et al., MNRAS in press, 2025

 
description: data/ contains mainly FITS files



data/originals is the full set of original files from Teresa.



It is not included in the repo for space reasons but is available at this Google Drive link.



data/first-look is the initial partially reduced spectra from Teresa for reference



Also includes a PDF showing the slit positions.





docs/ contains documentation



pn-ou5-physics contains most of the work that is not in notebooks

pn-ou5-pipeline describes all the steps in the initial data reduction

pn-ou5-admin describes setting up the python virtual environment, etc



notebooks/ contains lots of jupyter notebooks

mes-longslit/ contains python source code for library functions that are used in the notebooks

pyproject.toml specifies the dependencies for use with uv or other package manager

cloudy/ contains input and output files from the Cloudy models

cspn-tables/ contains third-party post-agb evolutionary tracks (from Miller Bertolami and from MIST)
DOI: 10.15468/dl.4666pp
title: Occurrence Download

description: A dataset containing 201 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Meiodorvillea minuta",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 201 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042734-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/kgsnwu
title: PAN-00107475 - coin/coin-related, Theodosius' dynastie (379-455), aes IV

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00107475&lt;/p&gt;
description: Modified: 2025-06-10T10:13:14+02:00
DOI: 10.15468/dl.nbnan6
title: Occurrence Download

description: A dataset containing 16999 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-155.59725 20.04273,-42.95271 20.04273,-42.95271 65.04273,-155.59725 65.04273,-155.59725 20.04273))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ixodes scapularis",
 "Year 1899-2025"
 ]
}

 The dataset includes 16999 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042736-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17548171
title: Barriers and enablers of scaled Agile multidisciplinary product development: a literature review
DOI: 10.15468/dl.z8hhuz
title: Occurrence Download

description: A dataset containing 374 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhynchosia nyasica",
 "Continent is Africa"
 ]
}

 The dataset includes 374 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042737-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.msydky
title: Occurrence Download

description: A dataset listing the 113 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "GadmGid is one of (COL.7.2_2)",
 "StateProvince is one of (Boyacá)",
 "Geometry POLYGON((-72.8835 5.55235,-72.88472 5.54869,-72.88032 5.54767,-72.87888 5.55152,-72.8835 5.55235))"
 ]
 }
 ]
}

 The dataset's 113 records were derived from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042726-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.srg2br
title: Occurrence Download

description: A dataset containing 264 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((19.047760 -31.438998, 19.041305 -31.387893, 18.975833 -31.387893, 18.982266 -31.438998, 19.047760 -31.438998))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 264 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042738-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jf3asj
title: Occurrence Download

description: A dataset containing 376 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melinna maculata",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 376 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042739-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17873489
title: Legacy Partner Archive: (0650) SI Wild

description: Sample photos, from the predecessor to e-mammal

https://emammal.si.edu/
DOI: 10.5281/zenodo.17363493
title: Spatial variation in keystone predation promotes landscape-scale diversity by altering the distribution and identity of foundation species

description: These scripts and data yield analyses and figures presented in the submitted manuscript of the same name.
DOI: 10.5281/zenodo.17873460
title: Spatial variation in keystone predation promotes landscape-scale diversity by altering the distribution and identity of foundation species

description: These scripts and data yield analyses and figures presented in the submitted manuscript of the same name.
DOI: 10.17026/ar/gtfonq
title: PAN-00154542 - arrow

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00154542&lt;/p&gt;
description: Modified: 2025-08-27T10:28:36+02:00
DOI: 10.5281/zenodo.13318143
title: Legacy Partner Archive: (0650) SI Wild

description: Sample photos, from the predecessor to e-mammal

https://emammal.si.edu/
DOI: 10.5281/zenodo.17873492
title: Legacy Partner Archive: (0650) SI Wild

description: Sample photos, from the predecessor to e-mammal

https://emammal.si.edu/
DOI: 10.5281/zenodo.17798418
title: MD Simulation Data Upload – LC8/nNOS

description: Naming convention: {PDB ID}{bound state abbr.}{peptide length}_{LC8 species}{number of residues per monomer}_{MD simulation time}_md{replicate}_dt{time step between frames in ps} For example, "1CMIs8_dros89_1us_md1_dt200" is a single replicate (out of three) 178-residue LC8 homodimer singly bound to an 8-residue nNOS peptide for a 1µs trajectory strided at 200ps. 

The 8-residue doubly bound complex had two replicates that were not run to completion and an additional two replicates (...md4 and ...md5) were added in their place.
DOI: 10.5281/zenodo.17798417
title: MD Simulation Data Upload – LC8/nNOS

description: Naming convention: {PDB ID}{bound state abbr.}{peptide length}_{LC8 species}{number of residues per monomer}_{MD simulation time}_md{replicate}_dt{time step between frames in ps} For example, "1CMIs8_dros89_1us_md1_dt200" is a single replicate (out of three) 178-residue LC8 homodimer singly bound to an 8-residue nNOS peptide for a 1µs trajectory strided at 200ps. 

The 8-residue doubly bound complex had two replicates that were not run to completion and an additional two replicates (...md4 and ...md5) were added in their place.
DOI: 10.15468/dl.x4r9hv
title: Occurrence Download

description: A dataset containing 277 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((94.66187 35.98112,65.54247 42.05234,63.06902 27.88619,65.65489 8.43579,86.45448 4.16343,95.33646 21.14637,94.66187 35.98112))",
 "TaxonKey is Cedrus"
 ]
}

 The dataset includes 277 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042740-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vb3q9c
title: Occurrence Download

description: A dataset containing 268 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhynchosia procurrens",
 "Continent is Africa"
 ]
}

 The dataset includes 268 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042741-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wwghdx
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((18.749036 -31.531205, 18.744149 -31.492052, 18.693973 -31.492052, 18.698847 -31.531205, 18.749036 -31.531205))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 115 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042742-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u4569e
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mesochaetopterus taylori",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 121 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042743-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.442gtz
title: Occurrence Download

description: A dataset containing 56323 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-55.69538 51.94277,-87.17582 55.76539,-99.88041 49.58173,-102.0166 40.81219,-99.99283 29.11946,-88.86225 23.27309,-61.65421 27.65786,-53.44684 36.09013,-55.69538 51.94277))",
 "TaxonKey is Tsuga"
 ]
}

 The dataset includes 56323 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042712-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/zc93ne
title: PAN-00179434 - eye clasp (book mount)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00179434&lt;/p&gt;
description: Modified: 2025-09-15T10:20:12+02:00
DOI: 10.15468/dl.zt3ubu
title: Occurrence Download

description: A dataset containing 224 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.68467 43.11424,10.13305 43.12795,9.77863 44.33364,8.89851 44.57554,7.85161 44.29109,7.68467 43.11424))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Ziphius cavirostris"
 ]
}

 The dataset includes 224 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042744-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjhfu6
title: Occurrence Download

description: A dataset containing 373 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhynchosia pycnostachya",
 "Continent is Africa"
 ]
}

 The dataset includes 373 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042745-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/5bedwn
title: PAN-00173191 - copper alloy pin and spring (brooch)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00173191&lt;/p&gt;
description: Modified: 2025-05-08T13:51:44+02:00
DOI: 10.15468/dl.jmwxd3
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Microphthalmus pettiboneae",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042747-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.psveqd
title: Occurrence Download

description: A dataset containing 312 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((18.739393 -31.697813, 18.733112 -31.647787, 18.668978 -31.647787, 18.675237 -31.697813, 18.739393 -31.697813))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 312 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042748-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hymcgt
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Castilleja stipifolia"
 ]
}

 The dataset includes 55 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042746-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.