cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15131/shef.data.12192156.v3
title: Children, Technology and Play – Family Case Studies Images

description: The <i>Family Case Studies Images</i> dataset forms part of <b>Children, Technology and Play</b> (2019-2020), an 8-month co-produced study by academics from the University of Sheffield and University of Cape Town, South Africa, the LEGO Foundation and Dubit. The study explored the contemporary play environments of children to identify the ways in which their play is shaped by technology, examine the relationship between digital play, learning and creativity, and explore the role of adults in mediating digital play. The UK research included case studies of 10 families in Sheffield with focus children aged 3-11. Each was visited 6 times at home and a range of qualitative data collection methods was employed. This dataset comprises researcher photos, parent photos (shared with the research team), child photos (many on the GoPro cameras used in the project), and photographed copies of child drawings and play journals, plus a spreadsheet containing relevant metadata. Personal and school names have been pseudonymised. The project received ethical approval from the University of Sheffield (no. 028701). The research tools and other datasets from the study are deposited elsewhere in ORDA and have been brought together in the <b>Children, Technology and Play collection</b>.
DOI: 10.6084/m9.figshare.28713239.v1
title: Sleep deprivation and Gut Microbiome--Peer J.

description: The study was conducted to investigate the impact of sleep deprivation on altering the puberty onset in juvenile Sprague-Dawley (SD) rats. Four pregnant SD rats were purchased from BioLASCO Taiwan Co. Ltd, and they were housed at the Laboratory Animal Center at Taipei Medical University in a controlled environment (12-hour light-dark cycle, 22–24°C, 40%–60% humidity). The juvenile SD rats were weaned and grouped at postnatal day 21 (PND 21). Then, they were randomly assigned to Control Female (CF) (n=6), Sleep-Deprivation Female (SDF) (n=6), Control Male (CM) (n=6), and Sleep-Deprivation Male (SDM) (n=6) groups, totally 24 rats. We ensured their body weight and sex were balanced across groups. They were subjected to 15 hours of sleep deprivation per day for 4 weeks after weaning. Sleep deprivation is a highly stressful condition; therefore, the body weights of rats were monitored every other day, and all rats survived until euthanization. The rats were euthanized by using cardiac puncture after 4 weeks of sleep deprivation, and blood samples and tissues were collected and stored in the -80 ℃ refrigerator until used.<b>Gut microbiome composition</b>Fecal samples were collected at vaginal opening days (PND 30~PND 40) from female rats and were collected at preputial separation days (PND 39~PND 49) from male rats during the experiment. In brief, collected fecal samples were transferred immediately to cold storage and remained stored at 80°C until processing near days of vaginal opening. Fecal genomic DNA was extracted using the QIAamp DNA Stool Mini Kit (cat. no. 51504, QIAGEN, Denmark) according to the manufacturer’s instructions, stored at -80°C, and underwent processing including polymerase chain reaction (PCR) assays and 16S rRNA sequencing. The Pacbio sequencing for full-length 16S genes (V1-V9 regions) was performed. The full-length 16S genes was amplified using barcoded 16S gene-specific primers. Subsequently, the PCR reaction was carried out by KAPA HiFi HotStart ReadyMix (Roche), and its products were purified using the AMPure PB Beads for SMRTbell library construction and sequencing processes. Consequently, multiple sequence alignment was performed by QIIME2 alignment MAFFT against the NCBI database to analyze the sequence similarities among the amplicon sequence variants (ASVs).<br>
DOI: 10.17632/6g9n6xdrzr
title: Extended data - Cheemarla et al, Nasal host response-based screening for undiagnosed respiratory viruses, The Lancet Microbe

description: Extended data 1. Acknowledgement of genomes used in phylogenetic analysis of Influenza C virus isolates (related to Fig 1)
Extended data 2. Differentially expressed genes across clinical samples from known virus-positive subjects, virus-negative subjects, and subjects discovered in a biomarker-based screen for undiagnosed infections (related to Figure 2)
Extended data 3. Acknowledgement of genomes used in phylogenetic analysis of SARS-CoV-2 isolates (related to Fig 3)
DOI: 10.6084/m9.figshare.14356994.v1
title: DurenPnas2018

description: scATAC-seq dataset processed for inclusion in scATAC.Explorer R package. scATAC.Explorer is an R package containing a curated collection of publicly available scATAC-seq datasets that can easily be searched and retrieved within R. Included datasets are processed into a consistent format for ease of analysis.<br>This dataset was not generated by our lab. Please also give credit to the source the dataset was retrieved from, included in reference field.
DOI: 10.6084/m9.figshare.14706003.v1
title: small re-identification dataset with classes

description: Small dataset containing 5 coiuples of similar objects, taht differ for a small amount of visual features. <br>
DOI: 10.6084/m9.figshare.24680646.v1
title: SC&PPG modalities

description: Folder including the SC (skin-conductance) and PPG (photopletismograph) modalities of I DARE, IULM Dataset of Affective REsponses.
DOI: 10.6084/m9.figshare.5126731.v1
title: Supplementary Material for: Low Cognitive Status Is Associated with a Lower Ability to Maintain Standing Balance in Elderly Outpatients

description: <b><i>Background:</i></b> Evidence is emerging that cognitive performance is involved in maintaining balance and thereby involved in falls in the elderly. <b><i>Objective:</i></b> To investigate the association of cognitive status with measures of standing balance in elderly outpatients. <b><i>Methods:</i></b> In a cross-sectional study, 197 community-dwelling elderly [mean age (SD) 81.9 (7.1) years] referred to a geriatric outpatient clinic were included and subsequently dichotomized into a group with low and normal cognitive status based on cut-off values of the Mini-Mental State Examination, Montreal Cognitive Assessment and Visual Association Test. The ability to maintain standing balance as well as the center of pressure (CoP) movement were assessed during 10 s of side-by-side, semi-tandem and tandem stance with eyes open and eyes closed. Logistic and linear regression were used to examine the association between cognitive status and measures of standing balance adjusted for age, gender and highest completed education. <b><i>Results:</i></b> Low cognitive status in elderly outpatients was associated with a lower ability to maintain 10 s of balance in side-by-side stance with eyes closed [OR (95% CI): 3.57 (1.60; 7.97)] and in semi-tandem stance with eyes open and eyes closed [OR (95% CI): 3.93 (1.71; 9.00) and OR (95% CI): 2.32 (1.11; 4.82), respectively]. Cognitive status was not associated with CoP movement. <b><i>Conclusion:</i></b> Low cognitive status associates with a lower ability to maintain standing balance in more demanding standing conditions in elderly outpatients. This may have implications for routine geriatric screening strategies and interpretation of results of either standing balance or cognitive tests.
DOI: 10.6084/m9.figshare.9311888.v1
title: Supplementary Material for: Audiovestibular Phenotypes and Advanced Magnetic Resonance Imaging Features of Cochlin Gene Mutation Carriers

description: <b><i>Objective:</i></b> To describe clinical and imaging findings in a group of patients affected by nonsyndromic deafness A9 (DFNA9), using advanced magnetic resonance imaging (MRI) with 3-dimensional (3D) fluid-attenuated inversion recovery (FLAIR) sequence. <b><i>Method:</i></b> A retrospective case review was conducted in a tertiary referral center in Italy. Four sequential adult DFNA9-affected patients, who had undergone MRI at our Department between January 2017 and June 2018, were enrolled (male = 2, female = 2; median age: 65.6 years; 8 diseased ears analyzed). Three patients were relatives; the fourth was unrelated. The main outcome measures – age, sex, records of audiological and vestibular testing, genetic assessment, MRI findings – were analyzed. <b><i>Results:</i></b> All subjects suffered from bilateral progressive sensorineural hearing loss, more severely at the high frequencies and with a typical clinical pattern of bilateral chronic degenerative cochleovestibular deficit. Aural fullness was reported at the onset of the disease. All patients revealed a pathogenic heterozygous mutation in the Limulus factor C, Coch-5b2 and Lgl1 domain of cochlin. None of the patients showed a significant vestibular and cochlear endolymphatic hydrops at MRI, while high bilateral contrast enhancement on 4-h delayed postcontrast 3D FLAIR sequence was observed in all ears. <b><i>Conclusions:</i></b> Increased perilymph enhancement on 4-h delayed postcontrast 3D FLAIR sequence is the common imaging feature of DFNA9 ears, suggesting that blood-labyrinthine barrier breakdown may play the main role in the pathophysiology of this disease. Significant hydrops has been excluded by MRI. This finding might be clinically useful in differentiating DFNA9 disease from other pathologies with similar clinical findings like Ménière’s disease.
DOI: 10.17632/9tjcy8rg4t
title: Direct interrogation of context-dependent GPCR activity with a universal biosensor platform. Janicot, Maziarz et al.

description: These files include all raw, non-edited Western Blot images included in the Janicot, Maziarz et al.
DOI: 10.6084/m9.figshare.16980613.v1
title: Cld Genomic Neighborhood Protein FASTA

description: cld-genomic-neighborhood-proteins.faa.gz is a gzipped FASTA file containing all protein sequences identified within Cld genomic neighborhoods. This data and Supplementary Data 1 would enable reproduction of this analysis.
DOI: 10.6084/m9.figshare.21905026.v1
title: Hydrocarbon generation and retention potential of Chang 7 organic-rich shale in Ordos Basin, China

description: Detailed spreadsheet of the back-calculated original geochemical parameters using the mass-balance method of Jarvie (2012a).
DOI: 10.6084/m9.figshare.26830114.v1
title: Phylogenomic conflict analyses of plastid and mitochondrial genomes of <i>Impatiens</i> (Balsaminaceae) reveals its complex evolutionary history

description: A mitochondrial sequence matrix of 139 samples representing 139 <i>Impatiens</i> species, 1 sample of <i>Hydrocera</i><i> </i><i>triflora </i>and 2 samples representing of Marcgraviaceae species.
DOI: 10.6084/m9.figshare.28040396.v1
title: Gout Management using Uricase and Sodium Citrate Hollow Mesoporous Nanomotors

description: Source Data
DOI: 10.6084/m9.figshare.20368821.v1
title: disp_Data.rar

description: These data contain the initial dispersion measurements used in the paper entitled " Constraints on lithospheric azimuthal seismic anisotropy beneath the Iran plateau revealed by ambient noise tomography".
DOI: 10.6084/m9.figshare.24208827.v3
title: Dataset for Stochastic Rideshare System with Flexible Pickup and Drop-off Points

description: travel_times.json contains historical travel time data for every pair of the 261 zones in New York City. The range of years contained in the data is 2018-2023.distance_matrix.csv contains the geodesic distances of every pair of the 261 zones.<br>coordinates.csv contains the coordinates of the 261 zones.<br>cancellations.json contains historical passenger cancellation data for 1000 randomly generated passengers for 1000 days.Data was derived from the following sources:New York TLC trip record data: https://www.nyc.gov/site/tlc/about/tlc-trip-record-data.pageThe raw data is in PARQUET format. It would help if you had an external library to open the data. Libraries such as Pandas can be used.<br>To open the JSON file you need to import JSON libraries.
DOI: 10.6084/m9.figshare.17162546.v1
title: Rewritable Two-Dimensional DNA-Based Data Storage System (2DDNA) Dataset

description: This dataset contains sequencing data obtained from Illumina MiSeq device to prove the concept of the proposed 2DDNA framework. Please refer to README.txt for detailed description of each file.
DOI: 10.6084/m9.figshare.20306519.v1
title: Serum 14-3-3η as predictor of clinical remission and progression of structural damage in early rheumatoid arthritis following a treat-to-target strategy in a randomized controlled trial

description: 14-3-3η is a proinflammatory mediator critical to joint destruction in rheumatoid arthritis (RA). We aimed to evaluate serum 14-3-3η for predicting disease activity and radiographic progression in patients with early RA in the double-blinded, randomized OPERA trial. 180 patients with early RA were randomized to receive methotrexate (MTX) + adalimumab or MTX + placebo in combination with glucocorticoid injections into swollen joints. Disease activity was measured using the 28-joint Disease Activity Score–C-reactive protein (DAS28-CRP). Clinical remission was defined as DAS28-CRP &lt; 2.6. X-rays of hands and feet were evaluated by the Total Sharp van der Heijde score (TSS). Radiographic progression was defined as exceeding the smallest detectable change (1.8 TSS-units). Serum 14-3-3η was determined by enzyme-linked immunosorbent assay. Multivariate logistic regression models were used to identify predictors of DAS28-CRP remission at 6 months and radiographic progression at 12 months. Baseline 14-3-3η was a borderline significant independent predictor of radiographic progression at 12 months (odds radio = 1.02, 95% confidence interval 1.00–1.03, p = 0.05). In anti-cyclic citrullinated peptide antibody (ACPA)-negative patients, a moderate/high baseline 14-3-3η concentration increased the risk of radiographic progression at 12 months [4/51 (8%) vs 3/9 (33%), χ2 = 4.823, p = 0.028]. No value of 14-3-3η for predicting achievement of clinical remission was found. Serum 14-3-3η was a borderline significant predictor of radiographic progression, particularly in ACPA-negative patients, but not of predicting achievement of clinical remission. Optimal cut-off levels of 14-3-3η for predicting radiographic progression in RA need further clarification.
DOI: 10.6084/m9.figshare.28815209.v1
title: <b>Table S1. Summary of sequencing and annotation results of six </b><b><i>Salmonella enterica</i></b><b> isolates from fresh produce and agricultural environment in South Korea</b>

description: <b>Summary of sequencing and annotation results of six </b><b><i>Salmonella enterica</i></b><b> isolates from fresh produce and agricultural environment in South Korea</b>
DOI: 10.23645/epacomptox.28021040.v1
title: DCAP Calibration and Example Chemical Dataset

description: Dataset associated with <i>Scientific Support and Standard Methods for the Development and Implementation of the EPA Database Calibrated Assessment Product (DCAP)</i>.Science Inventory, CCTE products: https://cfpub.epa.gov/si/si_public_search_results.cfm?advSearch=true&showCriteria=2&keyword=CCTE&TIMSType=&TIMSSubTypeID=&epaNumber=&ombCat=Any&dateBeginPublishedPresented=07/01/2017&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&DEID=&personName=&personID=&role=Any&journalName=&journalID=&publisherName=&publisherID=&sortBy=pubDate&count=25
DOI: 10.6084/m9.figshare.23634678.v1
title: CT_DT data_Rawlings et al..xlsx

description: The is behavioural data from a sample of UK adult participants who completed the remote associations test, as well as an alternate uses task. The latter comprises originality, fluency, elaboration and a summed score of each of these three.
DOI: 10.6084/m9.figshare.21646682.v6
title: Calcium imaging in the dorsal raphe nucleus of zebrafish

description: Dataset of calcium imaging experiments in zebrafish during short-term motor learning behavior described in Kawashima <em>et al</em>., (Cell), 2016. It was acquired locally in a single axial plane of the DRN at the speed of 30 Hz and was not part of the above paper. <br> This data contains three folders for three independent experiments. <br> cell_resp2.mat is Ncell x Tpoint array of the normalized neuron time course. <br> cell_info.mat contains the loci of identified neurons <br> sync_tcourse.mat contains the task information.
DOI: 10.6084/m9.figshare.21692777.v1
title: neonate_sepsis

description: Các yếu tô nguy cơ gây Nhiễm trùng sơ sinh
DOI: 10.6084/m9.figshare.27969276
title: A global dataset of remote sensing-based soil critical point and permanent wilting point

description: Description
This long-term global soil hydraulic properties dataset is based on a neural network soil moisture product (Yao et al., 2021). Using McColl's (2019) method to calculate drydown timescales, there are six parameters related to soil moisture drydown at two sampling frequencies: the global medians of estimated parameters, namely τS (short-term timescale of drydown), annual drydown times (ndd), τL (long-term timescale of drydown), the global average results of soil moisture before (θC) and after drydown (θW), and the fitting coefficient (R2) of soil moisture drydown characteristics. This dataset contains global soil moisture drydown characteristics at a 36km resolution from 2002 to 2023. Each file contains 406 (latitude) * 964 (longitude) grid points. All files can be opened in MATLAB. We believe it can help us gain more knowledge of land-atmosphere feedback and provide practical input parameters for land surface models.

Term of use
Spatial resolution: 36km x 36km
Time range: 2002.6.1-2023.12.31
Files type: .mat
Filename: "Parameter""Sample frequency""Year".mat
Parameter:

tauS: τS [day], Short-term timescale of drydown
ndd: ndd [times], Annual times of drydown events
tauL: τL [day], Long-term timescale of drydown
thetaC: θC [m³/m³], Initial soil moisture value at the beginning of drydown events - long-term median/mean may serve as the critical point
thetaW: θW [m³/m³], Minimum soil moisture value during drydown events - long-term median/mean may serve as the permanent wilting point
R2: R2[-], fitting coefficient of the drydown curve. Range is [0-1]. The closer to 1, the better.
Sample frequency:
f1: one-day interval
f3: three-day interval
Year: From 2002 to 2023
Reference
McColl, K. A., Q. He, H. Lu, et al., “Short-Term and Long-Term Surface Soil Moisture Memory Time Scales Are Spatially Anticorrelated at Global Scales,” J. Hydrometeor., Amer. Meteorological Soc., Boston, vol. 20, no. 6, pp. 1165-1182, Jun. 2019. https://doi.org/10.1175/jhm-d-18-0141.1
Yao, P., H. Lu, J. Shi, et al., “A long-term global daily soil moisture dataset derived from AMSR-E and AMSR2 (2002-2019),” Sci. Data, Springer Nature, New York, vol. 8, no. 1, pp. 143, Dec. 2021. https://doi.org/10.1038/s41597-021-00925-8
DOI: 10.6084/m9.figshare.27969276.v1
title: A global dataset of remote sensing-based soil critical point and permanent wilting point

description: Description
This long-term global soil hydraulic properties dataset is based on a neural network soil moisture product (Yao et al., 2021). Using McColl's (2019) method to calculate drydown timescales, there are six parameters related to soil moisture drydown at two sampling frequencies: the global medians of estimated parameters, namely τS (short-term timescale of drydown), annual drydown times (ndd), τL (long-term timescale of drydown), the global average results of soil moisture before (θC) and after drydown (θW), and the fitting coefficient (R2) of soil moisture drydown characteristics. This dataset contains global soil moisture drydown characteristics at a 36km resolution from 2002 to 2023. Each file contains 406 (latitude) * 964 (longitude) grid points. All files can be opened in MATLAB. We believe it can help us gain more knowledge of land-atmosphere feedback and provide practical input parameters for land surface models.

Term of use
Spatial resolution: 36km x 36km
Time range: 2002.6.1-2023.12.31
Files type: .mat
Filename: "Parameter""Sample frequency""Year".mat
Parameter:

tauS: τS [day], Short-term timescale of drydown
ndd: ndd [times], Annual times of drydown events
tauL: τL [day], Long-term timescale of drydown
thetaC: θC [m³/m³], Initial soil moisture value at the beginning of drydown events - long-term median/mean may serve as the critical point
thetaW: θW [m³/m³], Minimum soil moisture value during drydown events - long-term median/mean may serve as the permanent wilting point
R2: R2[-], fitting coefficient of the drydown curve. Range is [0-1]. The closer to 1, the better.
Sample frequency:
f1: one-day interval
f3: three-day interval
Year: From 2002 to 2023
Reference
McColl, K. A., Q. He, H. Lu, et al., “Short-Term and Long-Term Surface Soil Moisture Memory Time Scales Are Spatially Anticorrelated at Global Scales,” J. Hydrometeor., Amer. Meteorological Soc., Boston, vol. 20, no. 6, pp. 1165-1182, Jun. 2019. https://doi.org/10.1175/jhm-d-18-0141.1
Yao, P., H. Lu, J. Shi, et al., “A long-term global daily soil moisture dataset derived from AMSR-E and AMSR2 (2002-2019),” Sci. Data, Springer Nature, New York, vol. 8, no. 1, pp. 143, Dec. 2021. https://doi.org/10.1038/s41597-021-00925-8
DOI: 10.6084/m9.figshare.14642826.v1
title: Subject averaged EMG and GRF data

description: Each data file contains the processed EMG, and GRF data for 1 participant stored in a Matlab structure. The processing techniques used are described in detail in a paper in review. <br>Each column in the n-by-8 matrix of EMG data represents 1 muscle of the right leg. The order is: Soleus, Tibialis anterior, Medial Gastrocnemius, Lateral Gastrocnemius, Rectus Femoris, Vastus Medialis, Vastus Lateralis, Biceps Femoris.<br>Details on rejected conditions are also included in this data.
DOI: 10.6084/m9.figshare.12431864.v2
title: Cerasus serrulata genome gff

description: it contains 29,094 genes<br>
DOI: 10.6084/m9.figshare.17707376.v1
title: EEG Dataset for RSVP and P300 Speller Brain-Computer Interfaces

description: Subject answers to questionnaire
DOI: 10.6084/m9.figshare.27949890.v1
title: Psychological assessment instrument

description: The present study aimed to identify and analyze the psychological instruments used in research with taekwondo athletes. Through a literature review in the Scopus, Science Direct, Web of Science, and SAGE databases, 56 studies that met the inclusion criteria were collected. The results show a wide variety of questionnaires used to assess different psychological constructs, such as motivation, anxiety, self-confidence, and mental abilities, among others, reflected in 99 different psychological instruments...
DOI: 10.6084/m9.figshare.4748332
title: Wiley Open Science Researcher Survey 2016

description: The Wiley Open Science Researcher Survey was undertaken to understand experiences and practices in open science, with a particular focus on publishing open access and open data.<br>The data is being shared in an effort to advance the global conversation around open science and to help Wiley better meet the needs of our researchers, authors, and partners in the rapidly evolving landscape of scientific research and communications.<br>