cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.frfwq4
title: Occurrence Download

description: A dataset containing 2239442 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-94.32691 16.30305,-92.16584 14.60291,-92.13529 15.29642,-91.70766 16.017,-90.59276 16.05369,-90.30259 16.44958,-91.34112 17.392,-94.03673 17.65415,-94.32691 16.30305))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2239442 records from 947 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023512-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z5ump6
title: Occurrence Download

description: A dataset containing 1472 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.14780889296432",
 "DecimalLongitude is less than 6.15086844614872",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1472 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023562-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10155515
title: Code and Source Data for "Knowledge-Guided Machine Learning can improve C cycle quantification in agroecosystems"

description: Datasets for code and Source Data for the study "Knowledge-Guided Machine Learning can improve C cycle quantification in agroecosystems" https://doi.org/10.1038/s41467-023-43860-5. All files belong to Licheng Liu and Zhenong Jin at University of Minnesota. deposit_code_v2.zip contains packaged codes and sample runs for KGML-ag-Carbon training, validation and implementations. Source Data.zip contains data for generating the figures inside the study. 

Note: We used Pytorch 1.6.0 (https://pytorch.org/get-started/previous-versions/, last access: 21 Oct 2023) and Python 3.7.11 (https://www.python.org/downloads/release/python-3711/, last access: 21 Oct 2023) as the programming environment for model development. Statistical analysis, such as linear regression, was conducted using Statsmodels 0.14.0 (https://github.com/statsmodels/statsmodels/, last access: 21 Oct 2023) In order to use a GPU to speed-up the training process, we installed the CUDA Toolkit 10.1.243 (https://developer.nvidia.com/cuda-toolkit, last access: 21 Oct 2023). 

To use the full kgml_lib function, please create a new environment with the same python and libs above.
DOI: 10.5281/zenodo.10155516
title: Code and Source Data for "Knowledge-Guided Machine Learning can improve C cycle quantification in agroecosystems"

description: Datasets for code and Source Data for the study "Knowledge-Guided Machine Learning can improve C cycle quantification in agroecosystems" https://doi.org/10.1038/s41467-023-43860-5. All files belong to Licheng Liu and Zhenong Jin at University of Minnesota. deposit_code_v2.zip contains packaged codes and sample runs for KGML-ag-Carbon training, validation and implementations. Source Data.zip contains data for generating the figures inside the study. 

Note: We used Pytorch 1.6.0 (https://pytorch.org/get-started/previous-versions/, last access: 21 Oct 2023) and Python 3.7.11 (https://www.python.org/downloads/release/python-3711/, last access: 21 Oct 2023) as the programming environment for model development. Statistical analysis, such as linear regression, was conducted using Statsmodels 0.14.0 (https://github.com/statsmodels/statsmodels/, last access: 21 Oct 2023) In order to use a GPU to speed-up the training process, we installed the CUDA Toolkit 10.1.243 (https://developer.nvidia.com/cuda-toolkit, last access: 21 Oct 2023). 

To use the full kgml_lib function, please create a new environment with the same python and libs above.
DOI: 10.15468/dl.37ujd6
title: Occurrence Download

description: A dataset containing 3450 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.15086844614872",
 "DecimalLongitude is less than 6.15392799933311",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 3450 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023563-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.afujwq
title: Occurrence Download

description: A dataset containing 7267 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.15392799933311",
 "DecimalLongitude is less than 6.15698755251751",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 7267 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023564-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a2u9ts
title: Occurrence Download

description: A dataset containing 1742 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.15698755251751",
 "DecimalLongitude is less than 6.1600471057019",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1742 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023566-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5xrxcp
title: Occurrence Download

description: A dataset containing 483 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Gabon Biodiversity Collection - Reptilia"
 ]
}

 The dataset includes 483 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023567-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jc6rrq
title: Occurrence Download

description: A dataset containing 2308 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.1600471057019",
 "DecimalLongitude is less than 6.16310665888629",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 2308 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023568-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvuys9
title: Occurrence Download

description: A dataset containing 3732 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.16310665888629",
 "DecimalLongitude is less than 6.16616621207069",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 3732 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023569-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mh4xw9
title: Occurrence Download

description: A dataset containing 620 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material citation, Specimen, Occurrence evidence)",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Momotus lessonii R.Lesson, 1842"
 ]
}

 The dataset includes 620 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023571-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cnm47v
title: Occurrence Download

description: A dataset containing 1694 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.16616621207069",
 "DecimalLongitude is less than 6.16922576525509",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1694 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023570-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85azdb
title: Occurrence Download

description: A dataset containing 2208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.16922576525509",
 "DecimalLongitude is less than 6.17228531843948",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 2208 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023572-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t9942c
title: Occurrence Download

description: A dataset containing 927 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.17228531843948",
 "DecimalLongitude is less than 6.17534487162387",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 927 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023573-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.438awd
title: Occurrence Download

description: A dataset containing 840 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.17534487162387",
 "DecimalLongitude is less than 6.17840442480827",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 840 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023574-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.agr5tf
title: Occurrence Download

description: A dataset containing 609292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "TaxonKey is one of (Acer platanoides L., Adelges tsugae Annand, 1924, Agrilus planipennis Fairmaire, 1888, Alliaria petiolata (M.Bieb.) Cavara & Grande, Channa argus (Cantor, 1842), Crocodylus niloticus Laurenti, 1768, Dreissena polymorpha (Pallas, 1771), Faxonius rusticus (Girard, 1852), Frangula alnus Mill., Heracleum mantegazzianum Sommier & Levier, Heracleum sphondylium L., Hydrocharis morsus-ranae L., Impatiens glandulifera Royle, Kali tragus (L.) Scop., Lissachatina fulica (Bowdich, 1822), Lycorma delicatula (White, 1845), Myriophyllum spicatum L., Phragmites australis subsp. australis, Potamogeton crispus L., Pterois volitans (Linnaeus, 1758), Pueraria lobata (Willd.) Ohwi, Python bivittatus Kuhl, 1820, Reynoutria japonica Houtt., Reynoutria sachalinensis (F.Schmidt) Nakai, Reynoutria ×bohemica Chrtek & Chrtková, Rhamnus cathartica L., Rhinella marina (Linnaeus, 1758), Stratiotes aloides L., Trapa natans L., Vincetoxicum nigrum (L.) Moench, Vincetoxicum rossicum (Kleopow) Barbar.)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 609292 records from 583 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023532-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hqvt7c
title: Occurrence Download

description: A dataset containing 8852 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amphidium mougeotii (Bruch & Schimp.) Schimp., Amphimallon majale (Razoumowsky, 1789))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 8852 records from 165 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0230322-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.naw37r
title: Occurrence Download

description: A dataset containing 110217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus vernus (L.) Bernh.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 110217 records from 404 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119878-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3dvzsp
title: Occurrence Download

description: A dataset containing 6676 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tremarctos ornatus (F.G.Cuvier, 1825)"
 ]
}

 The dataset includes 6676 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018842-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jqgxch
title: Occurrence Download

description: A dataset containing 1849 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oreortyx pictus (Douglas, 1829)",
 "HasCoordinate is True",
 "Country is United States of America",
 "Year is greater than or equal to 1999",
 "Year is less than or equal to 2001",
 "Month is greater than or equal to January",
 "Month is less than or equal to December",
 "HasGeospatialIssue is False",
 "DecimalLatitude is greater than or equal to 24.5",
 "DecimalLatitude is less than or equal to 49.5",
 "DecimalLongitude is greater than or equal to -125.0",
 "DecimalLongitude is less than or equal to -66.5"
 ]
}

 The dataset includes 1849 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0230338-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qwmn5e
title: Occurrence Download

description: A dataset containing 43244 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lepidoptera",
 "Year 2010-2011"
 ]
}

 The dataset includes 43244 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205984-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rysr4a
title: Occurrence Download

description: A dataset containing 614 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tribolium acutiflorum (Nees) Renvoize"
 ]
}

 The dataset includes 614 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018843-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3tdmtm
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Synergistia",
 "HasCoordinate is true",
 "Country is one of (Portugal)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0232052-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqbwqy
title: Occurrence Download

description: A dataset containing 459 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tribolium echinatum (Thunb.) Renvoize"
 ]
}

 The dataset includes 459 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018858-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bpg4ep
title: Occurrence Download

description: A dataset containing 17429 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oxytropis campestris (L.) DC.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 17429 records from 231 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119849-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ckmve7
title: Occurrence Download

description: A dataset containing 40636 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex binervis Sm."
 ]
}

 The dataset includes 40636 records from 310 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119848-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rranqv
title: Occurrence Download

description: A dataset containing 224 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Hong Kong, Macao)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is Geodetic datum assumed WGS84",
 "TaxonKey is Artocarpus heterophyllus Lam.",
 "Year 1949-2023"
 ]
}

 The dataset includes 224 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119846-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9fw7dt
title: Occurrence Download

description: A dataset containing 389884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vicia sepium L.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 389884 records from 1483 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119858-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.drabka
title: Occurrence Download

description: A dataset containing 1206 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Larrea tridentata (DC.) Coville",
 "Country is Mexico"
 ]
}

 The dataset includes 1206 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074436-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtkcab
title: Occurrence Download

description: A dataset containing 257 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Trifolium squarrosum L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 257 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020895-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uccx65
title: Occurrence Download

description: A dataset containing 231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Astragalus mongholicus Bunge"
 ]
}

 The dataset includes 231 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174874-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.