cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/byh7d3bsrd.1
title: Rice-crop intensity and phenology (transplanting dates) of Southern China in 2021

description: This dataset provides multi-cycle rice transplanting dates for southern China in the year 2021, with a spatial resolution of 10 meters. The dataset comprises three folders labeled with the suffixes 1, 2, and 3, corresponding to the first, second, and third rice growth cycles, respectively. For fields with a single rice-crop intensity, the pixels have values exclusively in the '1' suffix folders. Fields with double rice-crop intensity have pixels with values in both the '1' and '2' suffix folders. Similarly, fields with triple rice-crop intensity have pixels with values in the '1', '2', and '3' suffix folders. The pixel values represent Day of Year (DOY) values, with most values ranging from 0 to 365. A few values are less than 0 or greater than 365. Values less than 0 indicate events that occurred in the previous year, while values greater than 365 indicate events in the following year.
DOI: 10.17632/r8875mhwxt.1
title: Supplemental Materials (Rampazzo Morelli et al. 2024 AJP Endo)

description: Contains the supplementary materials for Rampazzo Morelli et al. 2024.
DOI: 10.2909/535026d0-6af8-49d2-9b1a-27caa6f203d7
title: Biochemical oxygen demand in rivers (2000-2022)

description: The key indicators for oxygenation of water bodies are biochemical oxygen demand (BOD), which is the amount of oxygen needed by microorganisms for aerobic decomposition of organic matter. The indicator illustrates temporal trends of BOD concentration in rivers and can be used to illustrate geographical variations in current nutrient concentrations and temporal trends.
Biochemical oxygen demand (BOD) is used to measure water quality. It refers to the amount of oxygen required by aerobic microorganisms to decompose organic substances in a water sample over a period of five days in the dark at 20°C (BOD5), measured as milligrams per litre (mg O2/L) and weighted by the number of measuring stations. High values of BOD5 are usually a sign of organic pollution, which affects the water quality. The cleanest rivers have BOD5 values of less than 1 mg O2/L, moderately and heavily polluted rivers show values ranging from 2 to 8 mg O2/L. Only complete series after inter/extrapolation are presented.
DOI: 10.17632/yn69ms7yv7.1
title: Oncogenic IDH mutations increase heterochromatin-related replication stress without impacting homologous recombination

description: Raw western blot files for Figure 2, Supplementary Figure 2 and Figure 3
Raw data and R scripts for Fig 1 and Supp Fig 1
Raw data and R scripts for Fig 2 and Supp Fig 2
Raw data and R scripts for Fig 3 and Supp Fig 3
Raw data and R scripts for Fig 4 and Supp Fig 4
DOI: 10.17632/xn63xpnkbx.2
title: Characterisation data for sediments collected from Peel Place Quarry, Cumbia, UK – A Sellafield nuclear site analogue

description: The data contained in this repository describes biogeochemical and physicochemical characterisation data in samples collected from adjacent to the United Kingdom’s Sellafield Nuclear Site. It includes particle size distribution and textural classification, pH measurements, water and organic carbon content (loss on ignition), BET surface area, bioavailability of iron, cation exchange, permeability measurements, X-ray analysis for phase (X-ray diffraction, XRD) and element (X-ray fluorescence, XRF) identification, ion chromatography, thin sectioning and optical and scanning electron microscopy (SEM) coupled with energy-dispersive X-ray spectroscopy (EDX), and 16S Ribosomal (rRNA) gene analysis.
DOI: 10.17632/7jfm66cy8y.1
title: Advancing Mechanical Testing of Biological Tissues and Hydrogels: A Buoy-Based Approach

description: Solidworks files for the design of the floating buoy system described in the following article:

Tuttle, Tyler, Daniel Deuel, and Sarah Calve. "Advancing Mechanical Testing of Biological Tissues and Hydrogels: A Buoy-Based Approach" Journal of Biomechanics. 2024.
DOI: 10.17632/9s9rfn5pfh.1
title: Hydrochar and wood vinegar from ananas biomass waste

description: Biochemical composition of ananas biomass waste as hydrochar and wood vinegar from a thermal hydrolization process at subcritical temperature level
DOI: 10.17632/bf5dh3m7mg
title: LinEnthParam-BDTT-Data

description: Data set 1 used in figures.
DOI: 10.17632/bf5dh3m7mg.1
title: LinEnthParam-BDTT-Data

description: Data set 1 used in figures.
DOI: 10.17632/wwfs8kxwdg.1
title: Rice-crop intensity and phenology (harvesting dates) of Southern China in 2021

description: This dataset provides multi-cycle rice harvesting dates for southern China in the year 2021, with a spatial resolution of 10 meters. The dataset comprises three folders labeled with the suffixes 1, 2, and 3, corresponding to the first, second, and third rice growth cycles, respectively. For fields with a single rice-crop intensity, the pixels have values exclusively in the '1' suffix folders. Fields with double rice-crop intensity have pixels with values in both the '1' and '2' suffix folders. Similarly, fields with triple rice-crop intensity have pixels with values in the '1', '2', and '3' suffix folders. The pixel values represent Day of Year (DOY) values, with most values ranging from 0 to 365. A few values are less than 0 or greater than 365. Values less than 0 indicate events that occurred in the previous year, while values greater than 365 indicate events in the following year.
DOI: 10.17632/kg5gpdgx27.1
title: Rice-crop intensity and phenology (heading dates) of Southern China in 2021

description: This dataset provides multi-cycle rice heading dates for southern China in the year 2021, with a spatial resolution of 10 meters. The dataset comprises three folders labeled with the suffixes 1, 2, and 3, corresponding to the first, second, and third rice growth cycles, respectively. For fields with a single rice-crop intensity, the pixels have values exclusively in the '1' suffix folders. Fields with double rice-crop intensity have pixels with values in both the '1' and '2' suffix folders. Similarly, fields with triple rice-crop intensity have pixels with values in the '1', '2', and '3' suffix folders. The pixel values represent Day of Year (DOY) values, with most values ranging from 0 to 365. A few values are less than 0 or greater than 365. Values less than 0 indicate events that occurred in the previous year, while values greater than 365 indicate events in the following year.
DOI: 10.17632/t4cbgsfm4j.1
title: Optimised diets for improving human, animal, and environmental health in the Rhine-Ruhr Metropolis in Germany

description: Source data
DOI: 10.17632/zrdh7zxh34
title: Youth’s energy intake during a laboratory-based loss-of-control eating paradigm: Associations with reported current dieting

description: Data and analysis files for Parker et al, "Youth’s energy intake during a laboratory-based loss-of-control eating paradigm: Associations with reported current dieting" manuscript
DOI: 10.17632/zrdh7zxh34.1
title: Youth’s energy intake during a laboratory-based loss-of-control eating paradigm: Associations with reported current dieting

description: Data and analysis files for Parker et al, "Youth’s energy intake during a laboratory-based loss-of-control eating paradigm: Associations with reported current dieting" manuscript
DOI: 10.15468/dl.ewhrbv
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The Coleoptera collection (EC) of the Muséum national d'Histoire naturelle (MNHN - Paris)",
 "Geometry POLYGON((106.10429 -5.62203,104.95564 -6.41825,105.47776 -7.25363,108.7018 -8.15428,112.56544 -8.81997,114.83663 -9.01576,114.44505 -8.32396,114.68 -7.71048,114.26231 -6.56183,111.49511 -6.13109,108.83233 -5.76561,106.10429 -5.62203))"
 ]
}

 The dataset includes 119 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004187-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/3f8474dzbb.1
title: OPIOID ABUSE RISK FACTORS-STUDY 1_PHASE 1&2

description: Datos Estudio 1 (fases 1 y 2) proyecto PID2019-106086RB-I00
DOI: 10.17632/ykmzxx2mxc.1
title: Abomasal RNA-seq reveals a strong local cell response of suckling lambs with resistance against Haemonchus contortus

description: Santa Ines (SI) and Ile de France (IF) sheep are known to be resistant and susceptible to H. contortus infection, respectively. Several studies have shown some genes as potential biological markers for sheep resistance against gastrointestinal nematodes using molecular tools, including transcriptomic analysis. In this study, we sequenced the polyadenylated RNA of the abomasal tissue of SI and IF suckling lambs to identify mucosa-specific transcript alterations between breeds artificially infected with H. contortus. Naïve SI (n=4) and IF (n=4) lambs were artificially infected every other day, over a period of 52 days, from 14 to 66 days old, with a total of 5,400 H. contortus infective larvae. Fundic abomasal tissue samples were collected at 68 days old, and submitted to high-throughput RNA sequencing. Differential expression analysis (P value &lt; 0.001 and FDR &lt; 0.05) between SI and IF samples identified 292 genes, most of which showed greater expression in SI lambs. To help annotate and assign possible function to differentially expressed genes (DEGs), we used previously available single-cell RNAseq (scRNAseq) data from ovine abomasal mucosa to putatively identify cell types and possible mechanisms involved in resistance to H. contortus. In particular, genes associated with endothelial and tuft cells showed most increase in expression in SI relative to IF lambs. Santa Ines lambs had higher percentual of tuft cells than IF lambs in the fundic abomasal mucosa. Although we found innate immunity (cell mediated in mucosa) acting as protagonist for impairing H. contortus infection, a stronger acquired immune response was being modulated at an earlier stage by SI lambs. We suggest that the complex connection between innate and adaptive immunities are via cellular antigen processing and presentation (APP). Based on comparison with scRNAseq data, SI lambs showed a robust APP mechanism characterized mainly by greater T cell APP, macrophage differentiation, and cytokine signalling. We identified potential mechanisms and markers to advance knowledge for selection of H. contortus resistance at a very early age, in SI as well as in other commercial sheep breeds.
DOI: 10.17632/rvzdt57x47.1
title: LINF_140012700

description: Ketoacyl-CoA synthase | fatty acid elongase | ELO-3; Leishmania infantum (strain JPCM5)
DOI: 10.17632/d3rfg4b77t.1
title: LINF_140012600

description: Ketoacyl-CoA synthase | fatty acid elongase | ELO-3; Leishmania infantum (strain JPCM5)
DOI: 10.17632/ytd6tmr2gy.1
title: LINF_140012100

description: Ketoacyl-CoA synthase| fatty acid elongase | ELO-1; Leishmania infantum (strain JPCM5)
DOI: 10.2909/0414ff0e-a07d-4e9e-a96c-29e07dd0a7f0
title: Climate related economic losses (1980-2023)

description: This indicator considers the number of fatalities, the overall and insured economic losses from weather- and climate-related events in the EEA member countries in the period from 1980 to 2023. Hazards considered are those classified as meteorological hazards, hydrological hazards and climatological hazards, based on the classification by the International Council for Science (ICSU).
DOI: 10.17632/9y7ccfsryr.1
title: Repetitive bathymetric surveys in the Lütschine delta (Lake Brienz, Switzerland)

description: This dataset includes Multibeam Echo Sounder Digital Bathymetric Models (DBMs or DEMS) and their associated Digital Uncertainty Models (DUMs) from the proximal Lütschine Delta of Lake Brienz, Switzerland. Surveys were performed in 2018 and 2023. By subtracting the DBMs within a GIS software (QGIS or ArcGIS) , a DBM of Difference (DoD) reveals the changes in the lakefloor over a five-year period. These surfaces contain a few areas with missing data, therefore an interpolated surface for 2018 is also included for mapping purposes.
DOI: 10.17632/2zsnfw3dnr.1
title: LINF_140012800

description: Ketoacyl-CoA synthase | fatty acid elongase | ELO-3; Leishmania infantum (strain JPCM5)
DOI: 10.17632/nfnrr72p8f.1
title: LDHU3_15.0170

description: ATP-dependent RNA helicase | DEAD/H | DRS1; Leishmania donovani (HU3 strain)
DOI: 10.17632/r7j5vp56fd.1
title: original_data_of_Paper_1

description: This is a dataset for "borrow-force-attack-force" by multi-scale elastic metamaterials with nonlinear damping.
DOI: 10.17632/24sd2dxzjv.1
title: LDHU3_15.0250

description: Serine/threonine-protein kinase | DYRK1; Leishmania donovani (HU3 strain)
DOI: 10.17632/stmt7vkd2p.1
title: LDHU3_15.0220

description: ZC3H13 | Zinc finger protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/2wmpkmc4gy.1
title: Antibacterial Properties of Endophytic Fungi Cultured in Nutrient Supplemented Lunar and Mars Simulants

description: These collective data are from projects at Davidson-Davie Community College (DDCC) in Thomasville, NC in 2022. All projects were conducted within a framework of endophytic fungi isolation, culturing in lunar or Mars regolith simulants supplemented by nutrient agar (potato dextrose or Sabouraud dextrose agar) and testing of organic extracts for antibiotic properties. Individual plant specimens representing 12 species were collected on the campus. Tissues were surface sterilized, and then plated on either potato dextrose, yeast-malt extract, or Sabouraud dextrose agar containing kanamycin (50 µg/mL) to inhibit bacteria followed by storage at room temperature. Plates were checked regularly for growth and subsampled and re-plated in an attempt to isolate endophytic fungi. Once isolated, sterilized scalpels were used to remove small strips of agar from a plate and placed in sterile 15mL conical centrifuge tubes containing sterile water (permanent water stock cultures) and are currently stored on the DDCC campus. Samples were then placed in autoclaved jars containing 16.5g of lunar or Mars regolith simulants supplemented with 10ml of PDA or SDA. Cultures were allowed to grow for one month as semi-solid fermentation cultures at room temperature followed by extraction. Organic extraction consisted of separation of organic material with ethyl acetate. The simulant-agar was removed to appropriate sized beakers and covered with twice the amount of ethyl acetate as semi-solid. A small amount of sterile deionized water was added to create two phases for separation in a separatory funnel. The resulting organic phase was placed in a modified distillation apparatus as there was no access to a rotary evaporator. The ethyl acetate was evaporated off and recollected in a receiving flask and the organic residue remaining from the extraction was collected and stored in methanol in a laboratory freezer until being tested for antibacterial properties. Extracts were tested against four species of bacteria (Escherichia coli, Staphylococcus epidermidis, Bacillus subtilis, and Klebsiella (Enterobacter) aerogenes) using the agar diffusion method in nutrient agar. Plates were inoculated by submerging sterile cotton swabs in fresh broth cultures of a species and subsequent swabbing of agar’s surface. Wells were constructed using sterilized 10mm diameter cuvettes and then filled with 25 µL of extract, or of control (+ kanamycin, - methanol) solutions. Plates were incubated at species appropriate temperatures for 48 hours followed by removal and the measurement (mm) of the zones of inhibition around each well. All testing was done in triplicate. Due to limited time and space, only six organic extractions were completed. Of the six, subsequent statistical analyses indicated five extracts had inhibitory effects against two species, B. subtilis and S. epidermidis while no inhibitory effects against E. coli or K. aerogenes were observed.
DOI: 10.17632/76c4bsk26b.1
title: Data For: Challenges in developing materials for microreactors: A case-study of yttrium dihydride in extreme conditions

description: Raw and processed data on our research about the irradiation stability of yttrium dihydride (YH2). 
Some software with MACOS are necessary to open some files:
- DataGraph.
And with the Windows OS:
- Digital Micrograph (GATAN), for DM3/DM4 and JPG.
- ImageJ.
- Excel and Word.
DOI: 10.17632/b62vxdvjzz.1
title: LDHU3_15.0290

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/tpg5g269cj.1
title: Temperature, and laser fluence swept millimeter wave response datasets for a 48,000 hour old encapsulated methyl ammonium lead iodide thin film

description: Metal halide perovskites are very strong candidates for use in photovoltaic conversion, as photodetectors, in optically pumped lasers and now in field effect transistors. We have subjected the very old thin film sample of Methylammonium lead Iodide (MAPbI3) with quartz substrate (glass encapsulated) to sweeping laser intensity and temperature (300K – 7K) simultaneously. Room temperature datasets of this old sample were already published in Mendeley Data, V4, doi: 10.17632/p65yxhdxkm.4 with all sample preparation and other details. These new data pertain to the IMPATT produced probe frequency of 120 GHz while 1 kHz pulsed laser beam at 532nm on the sample inside an ARS cryocooler model number DE-202/AI with Lakeshore 330 controller. The art of data collection remained the same however, the laser maximum fluence changed substantially in these sets of experiments due to passing the laser through the optical elements in the path and fitted on to the cryostat. The millimeter wave response ratio represents the lumped product of carrier-mobility and carrier concentrations for the given temperature and laser fluence levels. Carrier density changes with laser intensity nonlinearly, and the free carrier charge mobility changes with temperature and electric field of the probe beam. In our time-resolved TR-mmWC apparatus, the glass-covered sample was excited by a 1KHz triggered 532 nm laser beam with a width of 0.7 ns with maximum fluence 5.2 microjoules per sq. cm and a spot size around 10mm. Transient datasets were recorded using a 6 GHz input bandwidth digitizer after amplifying Schottky detector registered radiofrequency (RF) signal due to differential absorption of the passing millimeter wave from source (normal to sample) at 120 GHz through sample. Signal averaging was done 10,000 times and data of the same sample were collected on 2 different dates November 21, and November 23, 2023, respectively. The data attached are CSV files with column 1 being the pump-probe delay time (second), and column 2 being voltage response (V). Examples: File with name “November-23-2022-NCSU-Perovskite-Cryostat-200-8K-FullLaserPwr-120GHz.csv” means the date is Nov. 23, Temperature is 200.8K (un-calibrated) should read 7K (calibrated, DC 28.4 mV), Full Laser Power representing 5.2 microjoules/cm2 laser fluence, 250.8K should be read as 55K(DCV 28.4 mV), 350.8K as 151K (DCV 28.9 mV) and 443.8K as 241K (DCV 33.6 mV). For November 21, 2023, the temperature was swept more frequently. The filenames also carry the uncalibrated temperatures that the calibrated temperatures (K) should be read as 6.262 6.262 6.262 11.079 25.529 35.163 44.797 54.431 73.699 83.333 102.601 117.052 160.404 170.038 179.672 194.123 198.940 218.208 227.842 244.219 272.158 272.158 272.158 272.158 272.158 272.158 respectively. The DCV appears in the November 21 filenames themselves.
DOI: 10.17632/gs44hgz895.3
title: ¬Dynamically stiffening biomaterials reveal age- and sex-specific differences in pulmonary arterial adventitial fibroblast activation

description: Respiratory diseases like pulmonary arterial hypertension (PAH) frequently exhibit sexual dimorphism. Female PAH patients are more susceptible to the disease but have increased survival rates. This phenomenon is known as the estrogen paradox, and the underlying mechanisms are not fully understood. During PAH progression in vivo, human pulmonary arterial adventitial fibroblasts (hPAAFs) differentiate into an activated phenotype. These cells produce excess, aberrant extracellular matrix proteins that stiffen the surrounding pulmonary arterial tissues. Here, we employed dynamic poly(ethylene glycol)-alpha methacrylate (PEGαMA)-based biomaterials to study how the age and sex of human serum influenced hPAAF activation in response to microenvironmental stiffening in vitro. Results showed female and male cells responded differently to increases in microenvironmental stiffness and serum composition. Male hPAAFs were less activated than female cells on soft hydrogels and more responsive to increases in microenvironmental stiffness regardless of serum composition. Female hPAAF activation followed this pattern only when cultured in younger (age &lt; 50) female serum or when older (age ≥ 50) female serum was supplemented with estradiol. Otherwise, female hPAAF activation was relatively high on both soft and stiffened hydrogels, with little difference in activation between the two conditions. Collectively, these results suggest that it may be possible to model the estrogen paradox observed in PAH in vitro and that it is critical for researchers to report cell sex and serum source when conducting in vitro experimentation.
DOI: 10.17632/j9tt4j2vsf.1
title: LINF_140013000

description: Ketoacyl-CoA synthase | fatty acid elongase | ELO-4; Leishmania infantum (strain JPCM5)
DOI: 10.2909/244b7279-955d-4543-8b41-6a2105ce883a
title: Premature deaths due to exposure to fine particulate matter PM2.5 NUTS2 and NUTS3 (2005-2022)

description: This data set presents mortality attributable to exposure to fine particulate matter (PM2.5*) at the NUTS 2 (basic regions) and NUTS 3 (small regions) levels, since 2005. This indicator is based on the HRA calculations published at https://www.eea.europa.eu/en/datahub/datahubitem-view/49930245-dc33-4c47-93b8-9512f0622ebc

*PM2.5 are particulates whose diameter is less than 2.5 micrometers and which can be carried deep into the lungs where they can cause inflammation and exacerbate the condition of people suffering heart and lung diseases.
DOI: 10.17632/f27nsbrr9p.1
title: LINF_140012900

description: Ketoacyl-CoA synthase | fatty acid elongase | ELO-4; Leishmania infantum (strain JPCM5)