DOI: 10.5061/dryad.hf03h
title: Data from: Home bodies and wanderers: sympatric lineages of the deep-sea black coral Leiopathes glaberrima

description: Colonial corals occur in a wide range of marine benthic habitats from the
 shallows to the deep ocean, often defining the structure of their local
 community. The black coral Leiopathes glaberrima is a long-lived
 foundation species occurring on carbonate outcrops in the Northern Gulf of
 Mexico (GoM). Multiple color morphs of L. glaberrima grow sympatrically in
 the region. Morphological, mitochondrial and nuclear ribosomal markers
 supported the hypothesis that color morphs constituted a single biological
 species and that colonies, regardless of color, were somewhat genetically
 differentiated east and west of the Mississippi Canyon. Ten microsatellite
 loci were used to determine finer-scale population genetic structure and
 reproductive characteristics. Gene flow was disrupted between and within
 two nearby (distance = 36.4 km) hardground sites and two sympatric
 microsatellite lineages, which might constitute cryptic species, were
 recovered. Lineage one was outbred and found in all sampled locations (N =
 5) across 765.6 km in the Northern Gulf of Mexico. Lineage two was inbred,
 reproducing predominantly by fragmentation, and restricted to sites around
 Viosca Knoll. In these sites the lineages and the color phenotypes
 occurred in different microhabitats, and models of maximum entropy
 suggested that depth and slope influence the distribution of the color
 phenotypes within the Vioska Knolls. We conclude that L. glaberrima is
 phenotypically plastic with a mixed reproductive strategy in the Northern
 GoM. Such strategy might enable this long-lived species to balance local
 recruitment with occasional long-distance dispersal to colonize new sites
 in an environment where habitat is limited.
description: Ruiz-Ramos_et_al_2014_Leiopathes_GenotypesRuiz-Ramos_et_al_2014_DS_STRUCTUREInput file for Structure v 2.3.3. First line contains locus names. One line per individual. Missing data is encoded as -9. Column1: Sample ID; Column2: Population; Column3: Population Flag; Column 4-23: allele sizesRuiz-Ramos_et_al_2014_Structure_ParametersParameters for Structure v 2.3.3.Ruiz-Ramos_et_al_2014_Structure_mainparamsVK906_MaxEnt_dryadEnvironmental data is in ASCII grid file format for VK906. This is a non-proprietary text file format for gridded data. This file format describes the number of columns and the number of rows, the origin in the lower left corner, the cell-size, and a value or no-data value for each cell starting in the upper-left corner. ASC grids were used for Bathymetry, Slope, and Aspect. Bathymetry is the depth below sea-level. Slope is the value in degree or slope percentage between adjacent cells. Aspect is the direction of slope between adjacent cells. Slope and Aspect were derived from Bathymetry collected with a multibeam echo-sounder. CSV files contain the UTM location for each coral collected and an attribute that was analyzed in MaxEnt. (Clone ID, Color, and MSAT Lineage)VK826_MaxEnt_dryadEnvironmental data is in ASCII grid file format for VK826. This is a non-proprietary text file format for gridded data. This file format describes the number of columns and the number of rows, the origin in the lower left corner, the cell-size, and a value or no-data value for each cell starting in the upper-left corner. ASC grids were used for Bathymetry, Slope, and Aspect. Bathymetry is the depth below sea-level. Slope is the value in degree or slope percentage between adjacent cells. Aspect is the direction of slope between adjacent cells. Slope and Aspect were derived from Bathymetry collected with a multibeam echo-sounder. CSV files contain the UTM location for each coral collected and an attribute that was analyzed in MaxEnt. (Clone ID, Color, and MSAT Lineage)