cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34808/yqbt-3h78
title: Adenocarcinoma, metastatic, NOS - Female, 49 - Tissue image [5300730025887051]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 49Clinical description: History of breast carcinoma. PET scans: metastases to bones, liver, supraclavicular, mediastinal and axillary lymph nodes.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Adenocarcinoma, metastatic, NOSResult of the histopathological examination: Metastasis of breast carcinoma to lymph node: ER+, GATA3+, mammaglobin+, BCA225+, CCDFP15 single cells +, e-cadherin+, CK7-, CK20-.Sample:Material: FFPECollecting method: Core-needle biopsyTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Axillary lymph nodeType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.11930307
title: The automatic selection of hydraulic spray nozzles based on the psychrometric air conditions in hydropneumatic sprayers

description: ABSTRACT The aim of the current study is to develop an electronic system capable of automatically replacing hydraulic spray nozzles, based on psychrometric air conditions such as temperature and relative air humidity, in order to help improving the efficiency of application technologies. The system comprised one microcontroller, two solenoid valves, one temperature and relative humidity sensor, and a control algorithm. The system was installed in a hydropneumatic sprayer adapted with two semi-arcs. One semi-arc was equipped with JA-2 and other semi-arc with CVIA-015 hydraulic nozzles. After the algorithm interpreted the momentary psychrometric air conditions, it activated the JA-2 (when VPD &lt; 20 hPa) or the CVIA-015 nozzle (when VPD &gt; 20 hPa). The system was evaluated based on technical spraying parameters and on the response time to replace the hydraulic nozzle. Based on the results, the smallest-diameter droplets were the most influenced by psychrometric air conditions. VPD &gt; 20 hPa tended to increase the VMD values and to reduce droplet density, although it did not change the SPAN index. The necessary mean time to switch from the JA-2 to the CVIA-015 nozzle was 0.742 s, whereas the necessary mean time to switch from the CVIA-015 to the JA-2 nozzle was 0.684 s.
DOI: 10.6084/m9.figshare.11930307.v1
title: The automatic selection of hydraulic spray nozzles based on the psychrometric air conditions in hydropneumatic sprayers

description: ABSTRACT The aim of the current study is to develop an electronic system capable of automatically replacing hydraulic spray nozzles, based on psychrometric air conditions such as temperature and relative air humidity, in order to help improving the efficiency of application technologies. The system comprised one microcontroller, two solenoid valves, one temperature and relative humidity sensor, and a control algorithm. The system was installed in a hydropneumatic sprayer adapted with two semi-arcs. One semi-arc was equipped with JA-2 and other semi-arc with CVIA-015 hydraulic nozzles. After the algorithm interpreted the momentary psychrometric air conditions, it activated the JA-2 (when VPD &lt; 20 hPa) or the CVIA-015 nozzle (when VPD &gt; 20 hPa). The system was evaluated based on technical spraying parameters and on the response time to replace the hydraulic nozzle. Based on the results, the smallest-diameter droplets were the most influenced by psychrometric air conditions. VPD &gt; 20 hPa tended to increase the VMD values and to reduce droplet density, although it did not change the SPAN index. The necessary mean time to switch from the JA-2 to the CVIA-015 nozzle was 0.742 s, whereas the necessary mean time to switch from the CVIA-015 to the JA-2 nozzle was 0.684 s.
DOI: 10.34808/g3ex-k582
title: Gastrointestinal stromal tumor - Female, 71 - Tissue image [5300730025884771]

description: This is the histopathological image of ESOPHAGUS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 71Clinical description: CT: 44 x 38 x 100 mm tumor of wall of oesophagus.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: COMPLEX MIXED AND STROMAL NEOPLASMSDiagnosis: Gastrointestinal stromal tumorResult of the histopathological examination: GIST: CKAE1/AE3-, CD117+, DOG1+, CD34+, CK5/6-, SOX10-, p63-, LCA-, SMA-, Ki-67 20%.Sample:Material: FFPECollecting method: Surgical biopsyTopography: DIGESTIVE ORGANSOrgan: ESOPHAGUSTissue: Esophagus NOSType of staining: positive/IHCStaining: Not applicableAntibody: DOG1Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.5281/zenodo.6299928
title: Synthetic seismograms for "Resolving continental magma reservoirs with 3D surface wave tomography"

description: This repository contains the Specfem3D input files required to reproduce the results shown in Maguire et al., (2022), G-Cubed. Each model directory (M1, M2, and M3), containes subdirectories for each virtual source. Within a virtual source directory, there is a "DATA" directory, containing the Specfem3D input files, and an "OUTPUT_FILES" directory, containing the output files produced from a simulation, including the ascii seismograms. The Specfem3D source code is not included, but can be downloaded at https://github.com/geodynamics/specfem3d
DOI: 10.34808/btdn-ym70
title: Leiomyoma, NOS - Female, 56 - Tissue image [5300730025866701]

description: This is the histopathological image of SMALL INTESTINE tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 56Clinical description: CT: 40 x 50 mm tumor of small intestine.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: MYOMATOUS NEOPLASMSDiagnosis: Leiomyoma, NOSResult of the histopathological examination: Leiomyoma with bizarre nuclei: SMA+, DES+, CD117-, DOG1-, CKAE1/AE3-, CD34-, S100-, Ki-67 5%, Mitotic index: 2 mitoses/10 HPF.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: SMALL INTESTINETissue: Small intestine, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/wh5b-n797
title: Adenocarcinoma, metastatic, NOS - Female, 49 - Tissue image [5300730025885491]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 49Clinical description: History of breast carcinoma. PET scans: metastases to bones, liver, supraclavicular, mediastinal and axillary lymph nodes.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Adenocarcinoma, metastatic, NOSResult of the histopathological examination: Metastasis of breast carcinoma to lymph node: ER+, GATA3+, mammaglobin+, BCA225+, CCDFP15 single cells +, e-cadherin+, CK7-, CK20-.Sample:Material: FFPECollecting method: Core-needle biopsyTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Axillary lymph nodeType of staining: positive/IHCStaining: Not applicableAntibody: CK 7Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.5281/zenodo.6299927
title: Synthetic seismograms for "Resolving continental magma reservoirs with 3D surface wave tomography"

description: This repository contains the Specfem3D input files required to reproduce the results shown in Maguire et al., (2022), G-Cubed. Each model directory (M1, M2, and M3), containes subdirectories for each virtual source. Within a virtual source directory, there is a "DATA" directory, containing the Specfem3D input files, and an "OUTPUT_FILES" directory, containing the output files produced from a simulation, including the ascii seismograms. The Specfem3D source code is not included, but can be downloaded at https://github.com/geodynamics/specfem3d
DOI: 10.34808/1jaj-9h78
title: Chromophobe cell renal carcinoma - Male, 76 - Tissue image [5300730025876471]

description: This is the histopathological image of KIDNEY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 76Clinical description: Tumor of left kidney.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Chromophobe cell renal carcinomaResult of the histopathological examination: Chromophobe cell ranal cell carcinoma: CD117+, PAX-8+, CK7 focally+, VIM-, RCC-, AMACR-, Ki-67 5 %.Sample:Material: FFPECollecting method: Surgical specimenTopography: URINARY TRACTOrgan: KIDNEYTissue: Kidney, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.11930247
title: Effects of limestone and organic fertilizer on cassava yield and on chemical and physical soil properties

description: ABSTRACT Cassava has a high yield potential that can be achieved with adequate liming and fertilization of the soil. The objective of this study was to evaluate the effect of organic fertilizer application, in association or not with liming, on yield and morphological characteristics of cassava roots and on chemical and physical properties of the soil. The experiment was arranged in the split plot design. The plots corresponded to limestone rates (0 and 2.5 t ha-1) and the sub-plots to chicken manure rates (0, 4, 8, and 12 t ha-1). Yield showed no response to limestone application, but responded to manure, producing 43 t ha-1 of roots at the rate of 8 t ha-1. The treatments had no influence on soil density and total porosity. The addition of manure increased the concentrations of P and K, while the addition of limestone increased Ca and Mg in the soil. The pH was affected only by limestone. Therefore, limestone does not affect crop yield and soil physical properties up to the amount used. Use of chicken manure up to 8 t ha-1 increased yield. Limestone and manure affect soil fertility in different ways.
DOI: 10.6084/m9.figshare.11930247.v1
title: Effects of limestone and organic fertilizer on cassava yield and on chemical and physical soil properties

description: ABSTRACT Cassava has a high yield potential that can be achieved with adequate liming and fertilization of the soil. The objective of this study was to evaluate the effect of organic fertilizer application, in association or not with liming, on yield and morphological characteristics of cassava roots and on chemical and physical properties of the soil. The experiment was arranged in the split plot design. The plots corresponded to limestone rates (0 and 2.5 t ha-1) and the sub-plots to chicken manure rates (0, 4, 8, and 12 t ha-1). Yield showed no response to limestone application, but responded to manure, producing 43 t ha-1 of roots at the rate of 8 t ha-1. The treatments had no influence on soil density and total porosity. The addition of manure increased the concentrations of P and K, while the addition of limestone increased Ca and Mg in the soil. The pH was affected only by limestone. Therefore, limestone does not affect crop yield and soil physical properties up to the amount used. Use of chicken manure up to 8 t ha-1 increased yield. Limestone and manure affect soil fertility in different ways.
DOI: 10.6084/m9.figshare.11930091
title: Fertility of buds and pruning recommendation of different grapevine varieties grown in altitude regions of Santa Catarina State, Brazil

description: ABSTRACT Low bud fertility index is frequently observed in different grapevine varieties grown in high altitude of Santa Catarina Sate; in many cases less than one cluster per bud is observed. The objective of this study was to assess bud fertility of twenty six Vitis vinifera L. varieties and from this information, to recommend the method of pruning more suitable for these varieties in high altitude conditions. The grapevine canes and buds were collected from production vineyards located in São Joaquim, Santa Catarina State, in two consecutive vintages. Fifteen cane cuttings containing 10 nodes per variety were collected to determine bud fertility and placed in a growth chamber with controlled relative humidity, light, temperature. After budbreak, buds were classified as fertile or non-fertile according to the presence or absence of the inflorescence. The bud fertility varies according to the variety and its position in the cane. Merlot, Cabernet Franc, Cabernet Sauvignon, Tinta Roriz and Tinta Caiada, which present higher fertility in basal buds, are recommended for short or long pruning. The varieties Chardonnay, Manzoni Bianco, Sauvignon Blanc, Sangiovese, Pinot Gris, Tempranillo, Pinot Noir, Syrah, Montepulciano, and Touriga Nacional should be pruned preferentially in long pruning. While the varieties Viognier, Glera (Prosecco), Fiano, Garganega, Vermentino, Nebbiolo, Teroldego, Rebo, Canaiolo Nero and Touriga Francesa must be pruned exclusively with long pruning in order to ensure adequate cluster production.
DOI: 10.6084/m9.figshare.11930091.v1
title: Fertility of buds and pruning recommendation of different grapevine varieties grown in altitude regions of Santa Catarina State, Brazil

description: ABSTRACT Low bud fertility index is frequently observed in different grapevine varieties grown in high altitude of Santa Catarina Sate; in many cases less than one cluster per bud is observed. The objective of this study was to assess bud fertility of twenty six Vitis vinifera L. varieties and from this information, to recommend the method of pruning more suitable for these varieties in high altitude conditions. The grapevine canes and buds were collected from production vineyards located in São Joaquim, Santa Catarina State, in two consecutive vintages. Fifteen cane cuttings containing 10 nodes per variety were collected to determine bud fertility and placed in a growth chamber with controlled relative humidity, light, temperature. After budbreak, buds were classified as fertile or non-fertile according to the presence or absence of the inflorescence. The bud fertility varies according to the variety and its position in the cane. Merlot, Cabernet Franc, Cabernet Sauvignon, Tinta Roriz and Tinta Caiada, which present higher fertility in basal buds, are recommended for short or long pruning. The varieties Chardonnay, Manzoni Bianco, Sauvignon Blanc, Sangiovese, Pinot Gris, Tempranillo, Pinot Noir, Syrah, Montepulciano, and Touriga Nacional should be pruned preferentially in long pruning. While the varieties Viognier, Glera (Prosecco), Fiano, Garganega, Vermentino, Nebbiolo, Teroldego, Rebo, Canaiolo Nero and Touriga Francesa must be pruned exclusively with long pruning in order to ensure adequate cluster production.
DOI: 10.6084/m9.figshare.11930067
title: Foliar application of molybdenum on cover crops and response of common beans in successive cultivation

description: ABSTRACT The effects of foliar application of Mo and use of N from cover crops (Crotalaria juncea L. and Canavalia ensiformis (L.) DC) on the performance of common beans were investigated in this study. Field experiments were carried out in a succession planting system (cover crops - common beans), and nitrate reductase activities were evaluated in the laboratory. The production of cover crops was done in a 2 x 4 factorial scheme installed in random blocks with four replications. The two cover crops sunn hemp and jack bean composed the first factor and the molibdenum doses (0, 40, 80, and 120 g ha-1) the second. These doses were applied as foliar fertilization using sodium molybdate (Na2MoO4) as Mo source. For bean cultivation, an unfertilized control treatment was evaluated.. Sunn hemp showed a linear positive response to Mo application in terms of shoot dry matter and N accumulation, while jack bean showed a quadratic negative response for shoot dry matter; for N accumulation, there was no adjustment of the regression models. Nitrate reductase activity in the common beans was up to three times higher at the Mo dose of 0 g ha-1 when compared to the treatments with Mo application to both cover crops. Cover crops or Mo doses had no significant effect on bean productivity.
DOI: 10.6084/m9.figshare.11930067.v1
title: Foliar application of molybdenum on cover crops and response of common beans in successive cultivation

description: ABSTRACT The effects of foliar application of Mo and use of N from cover crops (Crotalaria juncea L. and Canavalia ensiformis (L.) DC) on the performance of common beans were investigated in this study. Field experiments were carried out in a succession planting system (cover crops - common beans), and nitrate reductase activities were evaluated in the laboratory. The production of cover crops was done in a 2 x 4 factorial scheme installed in random blocks with four replications. The two cover crops sunn hemp and jack bean composed the first factor and the molibdenum doses (0, 40, 80, and 120 g ha-1) the second. These doses were applied as foliar fertilization using sodium molybdate (Na2MoO4) as Mo source. For bean cultivation, an unfertilized control treatment was evaluated.. Sunn hemp showed a linear positive response to Mo application in terms of shoot dry matter and N accumulation, while jack bean showed a quadratic negative response for shoot dry matter; for N accumulation, there was no adjustment of the regression models. Nitrate reductase activity in the common beans was up to three times higher at the Mo dose of 0 g ha-1 when compared to the treatments with Mo application to both cover crops. Cover crops or Mo doses had no significant effect on bean productivity.
DOI: 10.6084/m9.figshare.11930079.v1
title: Sensitivity of forage turnip to the herbicide tepraloxydim

description: ABSTRACT The objective of this study was to evaluate the responses of Raphanus sativus to the application of the herbicide tepraloxydim by analyzing photosynthetic and biometric characteristics of the plants. The experiment was conducted in a greenhouse and treatments were instituted when the plants had five expanded leaves. The herbicide tepraloxydim was applied at doses of 0, 75, 100, and 125 g of active ingredient per hectare (g a.i. ha-1). The herbicide dose of 125 g a.i. ha-1 led to a small decrease in the photosynthetic rate, water use efficiency, effective quantum yield of PSII, rate of electron transport, and the concentration of chloroplastidic pigments in the leaves of R. sativus. On the other hand, there was a small increase in CO2 concentration in the substomatal chamber. The number of branches, leaves, flowers, plant height and dry mass of the stem and flowers were reduced more prominently in response to herbicide doses than the photosynthetic characteristics. Therefore, treatment with tepraloxydim inhibits the growth and formation of the leaves, branches and flowers of R. sativus at the stage of development analyzed. However, doses of 75, and 100 g a.i. ha-1 neither compromise the photosynthetic apparatus nor the stability of cell membranes.
DOI: 10.6084/m9.figshare.11930079
title: Sensitivity of forage turnip to the herbicide tepraloxydim

description: ABSTRACT The objective of this study was to evaluate the responses of Raphanus sativus to the application of the herbicide tepraloxydim by analyzing photosynthetic and biometric characteristics of the plants. The experiment was conducted in a greenhouse and treatments were instituted when the plants had five expanded leaves. The herbicide tepraloxydim was applied at doses of 0, 75, 100, and 125 g of active ingredient per hectare (g a.i. ha-1). The herbicide dose of 125 g a.i. ha-1 led to a small decrease in the photosynthetic rate, water use efficiency, effective quantum yield of PSII, rate of electron transport, and the concentration of chloroplastidic pigments in the leaves of R. sativus. On the other hand, there was a small increase in CO2 concentration in the substomatal chamber. The number of branches, leaves, flowers, plant height and dry mass of the stem and flowers were reduced more prominently in response to herbicide doses than the photosynthetic characteristics. Therefore, treatment with tepraloxydim inhibits the growth and formation of the leaves, branches and flowers of R. sativus at the stage of development analyzed. However, doses of 75, and 100 g a.i. ha-1 neither compromise the photosynthetic apparatus nor the stability of cell membranes.
DOI: 10.6084/m9.figshare.11930241
title: Interaction between growth strategies and phosphorus use efficiency in grasses from South America natural grasslands

description: ABSTRACT South American natural grasslands are composed of several species with different growth strategies, with variations in specific leaf area (SLA), leaf dry matter content (LDMC), specific root length (SRL) and specific root area (SRA). The objective of this study was characterizing in grasses cultivated with different levels of phosphorus (P) in the soil if species with higher leaf and root area production per unit of dry matter have higher tissue P concentration, P use efficiency and higher dry matter yield. The plant species were grown in a greenhouse in pots with 5 kg of soil in a completely randomized design with four replicates and two conditions of P availability: addition of 60 mg kg-1 soil and without addition of P. The species with the highest SRA had a higher leaf and root P concentration. The higher production of leaf or root surface area per unit of dry matter did not represent higher tissue P use efficiency. The group formed by species of genre Paspalum had a higher leaf and root P use efficiency, therefore, areas composed of this genre are preferred for P fertilization.
DOI: 10.6084/m9.figshare.11930241.v1
title: Interaction between growth strategies and phosphorus use efficiency in grasses from South America natural grasslands

description: ABSTRACT South American natural grasslands are composed of several species with different growth strategies, with variations in specific leaf area (SLA), leaf dry matter content (LDMC), specific root length (SRL) and specific root area (SRA). The objective of this study was characterizing in grasses cultivated with different levels of phosphorus (P) in the soil if species with higher leaf and root area production per unit of dry matter have higher tissue P concentration, P use efficiency and higher dry matter yield. The plant species were grown in a greenhouse in pots with 5 kg of soil in a completely randomized design with four replicates and two conditions of P availability: addition of 60 mg kg-1 soil and without addition of P. The species with the highest SRA had a higher leaf and root P concentration. The higher production of leaf or root surface area per unit of dry matter did not represent higher tissue P use efficiency. The group formed by species of genre Paspalum had a higher leaf and root P use efficiency, therefore, areas composed of this genre are preferred for P fertilization.