cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wpptks
title: Occurrence Download

description: A dataset containing 1308682 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Philippines",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1308682 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064233-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26554946.v1
title: Additional file 9 of Patterns of abundance, chromosomal localization, and domain organization among c-di-GMP-metabolizing genes revealed by comparative genomics of five alphaproteobacterial orders

description: Additional file 9: Table S8. All domains found associated with one of the c-di-GMP-associated domains examined in this study with associated Pfam HTML paths and Pfam IDs.
DOI: 10.15468/dl.vyhbhv
title: Occurrence Download

description: A dataset containing 907 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "Country is one of (Canada, United States of America, Greenland, Iceland)",
 "TaxonKey is Vulpes lagopus (Linnaeus, 1758)"
 ]
}

 The dataset includes 907 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015529-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kwzhxa
title: Occurrence Download

description: A dataset containing 1491 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Isoetes longissima Bory & Durieu",
 "Year 1980-2025"
 ]
}

 The dataset includes 1491 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015531-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n6mmn3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceId is 71283a81-28eb-4645-83c0-14f69f749398",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015530-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15189999
title: 4DHydro_Results_Tetis_Tugela_7p5sec_daily_exp41_20070101_20221231

description: Modeling results with TETIS software, for Tugela River with a spatial resolution of 7.5 seconds, and temporal resolution daily. Experiment 41. Forcing "mergedera5gpmsm2a". Calibrating methodology MOSCEM, calibrated variable SM+Q

Includes results for the following variables:



Total evapotranspiration flux in kg m-2 s-1

Discharge flux in m-3 s-1

Volumetric soil moisture content in percentage

Total water storage content in kg m-2
DOI: 10.5281/zenodo.15190000
title: 4DHydro_Results_Tetis_Tugela_7p5sec_daily_exp41_20070101_20221231

description: Modeling results with TETIS software, for Tugela River with a spatial resolution of 7.5 seconds, and temporal resolution daily. Experiment 41. Forcing "mergedera5gpmsm2a". Calibrating methodology MOSCEM, calibrated variable SM+Q

Includes results for the following variables:



Total evapotranspiration flux in kg m-2 s-1

Discharge flux in m-3 s-1

Volumetric soil moisture content in percentage

Total water storage content in kg m-2
DOI: 10.15468/dl.d34h99
title: Occurrence Download

description: A dataset containing 25657 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Arion vulgaris Moquin-Tandon, 1855"
 ]
}

 The dataset includes 25657 records from 137 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015533-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yubs8v
title: Occurrence Download

description: A dataset containing 300 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "OccurrenceStatus is Present",
 "TaxonKey is Cerastium nutans Raf."
 ]
}

 The dataset includes 300 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015535-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28770850
title: S2: A day at the beach: a portrait of British geology through sand

description: Appendix 2 Zircon Lu-Hf Data
DOI: 10.6084/m9.figshare.28770850.v1
title: S2: A day at the beach: a portrait of British geology through sand

description: Appendix 2 Zircon Lu-Hf Data
DOI: 10.6084/m9.figshare.28770853
title: S1: A day at the beach: a portrait of British geology through sand

description: Appendix 1 Zircon U-Pb Data
DOI: 10.6084/m9.figshare.28770853.v1
title: S1: A day at the beach: a portrait of British geology through sand

description: Appendix 1 Zircon U-Pb Data
DOI: 10.6084/m9.figshare.28770827
title: Influence of Drainage Infrastructure and Land Use on Microplastic Contamination in Urban Watersheds in Michigan in 2019

description: Data that compares microplastic (MP) morphologies and abundances upstream and downstream of 20 stormwater outfalls to determine the influence of outfall type on MP accumulation. Three surface water and sediment samples were collected at each sampling location, along with measurements of chemical and physical water quality parameters. Microplastics were identified using Nile Red staining, a rapid and effective screening technique suitable for large-scale environmental assessments while minimizing resource-intensive analyses.<br>
DOI: 10.15468/dl.vjf4df
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Museum of Comparative Zoology, Harvard University",
 "TaxonKey is Eleutherodactylus rufifemoralis Noble & Hassler, 1933"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015536-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15181816
title: Raw data for: "A DOF transcriptional repressor-gibberellin feedback loop plays a crucial role in modulating light-independent seed germination"

description: Excel raw data for Supplemental Figure 7 in a publication: "A DOF transcriptional repressor-gibberellin feedback loop plays a crucial role in modulating light-independent seed germination"
DOI: 10.5281/zenodo.15181817
title: Raw data for: "A DOF transcriptional repressor-gibberellin feedback loop plays a crucial role in modulating light-independent seed germination"

description: Excel raw data for Supplemental Figure 7 in a publication: "A DOF transcriptional repressor-gibberellin feedback loop plays a crucial role in modulating light-independent seed germination"
DOI: 10.15468/dl.zza2nb
title: Occurrence Download

description: A dataset containing 363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vachellia drepanolobium (Harms ex Y.Sjöstedt) P.J.H.Hurter)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 363 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015537-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34808/2dah-ar25
title: The results of the assessment of the degree of deacetylation, antimicrobial activity and cytotoxicity of chitosan materials
DOI: 10.5281/zenodo.15146535
title: TREND COMPONENT AND ITS SLOPE USING NLE, BEAST AND MRA-WT METHODS

description: This folder includes the code written in Matlab and developed by B.Martinez in order to reproduce the figure 8 of the manuscript entitled 'The nonlinear embeddings method for long-term vegetation dynamics' by by B.Martínez, V.García-Morales, J. A. Manzanares & M. A. Gilabert and published in the ISPRS Journal of Photogrammetry and Remote Sensing 2025.

The code provides the slope of the trend along with its associated error por 8 selected pixels in Spain described in Table 1.

The plot obtained with this code agrees with Figure 8 although it does not exactly reproduce the same layout. 

Created by Beatriz Martínez Díaz on 2025-04-02.Departament de Física i Termodinàmica. Facultat de FísicaUniversitat de Valènciaemail: beatriz.martinez@uv.esCopyright (c) 2025 Beatriz Martínez
DOI: 10.5281/zenodo.15146536
title: TREND COMPONENT AND ITS SLOPE USING NLE, BEAST AND MRA-WT METHODS

description: This folder includes the code written in Matlab and developed by B.Martinez in order to reproduce the figure 8 of the manuscript entitled 'The nonlinear embeddings method for long-term vegetation dynamics' by by B.Martínez, V.García-Morales, J. A. Manzanares & M. A. Gilabert and published in the ISPRS Journal of Photogrammetry and Remote Sensing 2025.

The code provides the slope of the trend along with its associated error por 8 selected pixels in Spain described in Table 1.

The plot obtained with this code agrees with Figure 8 although it does not exactly reproduce the same layout. 

Created by Beatriz Martínez Díaz on 2025-04-02.Departament de Física i Termodinàmica. Facultat de FísicaUniversitat de Valènciaemail: beatriz.martinez@uv.esCopyright (c) 2025 Beatriz Martínez
DOI: 10.5281/zenodo.15190073
title: Dataset_GNN_RL_AGV
DOI: 10.5281/zenodo.15190074
title: Dataset_GNN_RL_AGV
DOI: 10.15468/dl.bepzec
title: Occurrence Download

description: A dataset containing 1743 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Schoenoplectiella juncoides (Roxb.) Lye)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 1743 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015538-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d8gv2z
title: Occurrence Download

description: A dataset containing 391 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (CAN.11_1, CAN.9_1)",
 "OccurrenceStatus is Present",
 "TaxonKey is Corallorhiza striata Lindl."
 ]
}

 The dataset includes 391 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015539-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5883/ds-gorw24
title: Svetlana A. Maslakova, Irina A. Cherneva, Ethan X. Kahn, Audrey W. Wong, Gustav Paulay

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.15468/dl.dypr5c
title: Occurrence Download

description: A dataset containing 51441 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lupinus polyphyllus Lindl.)",
 "Country is Sweden",
 "HasCoordinate is true",
 "Year is 2004,2024"
 ]
}

 The dataset includes 51441 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015532-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hnrseq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceId is 71283a81-28eb-4645-83c0-14f69f749398",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015542-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2l91kj
title: CCDC 2391977: Experimental Crystal Structure Determination

description: Related Article: Xinxin Jia|2024|CSD Communication|||
description: Related Article: Xinxin Jia, Wenzhuo Zhang, Shi-Tong Zhang, Xiaolong Luo|2025|J.Solid State Chem.|348|125366|doi:10.1016/j.jssc.2025.125366
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.dsrpdc
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Robinia hispida L."
 ]
}

 The dataset includes 14 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015541-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s2dutw
title: Occurrence Download

description: A dataset containing 3437 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cyperus articulatus L.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 3437 records from 261 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015543-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5883/ds-pchat
title: Armin Namayandeh, R. William, Bouchard, Jr., and Dylan J. McNay

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.57710/alba-es-2024078522
title: Elucidating the selectivity of mineral uptake and its cytotoxic effects on breast cancer cells

description: Calcium phosphate microcalcifications (MCs) appear in most early breast cancer lesions and correlate with aggressive tumors and a poorer prognosis. Hydroxyapatite (HA) is a key MC component that crystallizes in the tumor microenvironment. We recently showed that inhibiting HA crystallization and modifying the precipitated mineral influences cellular responses. Contrary to the common belief that HA induces tumorigenesis, our findings reveal that its effects on cancer behavior can vary: depending on the mineral properties, HA can either suppress or promote cancerous activity. Our preliminary results indicate that these mineral particles are selectively taken up by precancerous and cancerous cells, but not by normal cells from the same isogenic cell line series. Moreover, particle uptake is strongly influenced by the surface charge of the particles. However, the mechanisms by which these particles influence cancer behavior remain unclear. We hypothesize that in addition to uptake, the intracellular processes these particles undergo—such as potential dissolution within or outside organelles and the formation of dense calcium condensates—play a significant role in the cellular response.
We propose to leverage a recent breakthrough in controlling particle uptake by adjusting their surface charge to investigate their intracellular interactions with organelles, spatial distribution, and dissolution dynamics. We aim to use cryo-SXT to image cells with varying malignancy potentials treated with amorphous and crystalline calcium phosphate particles of different surface charges. By employing spectro-microscopy, we will analyze the localization of intracellular particles and the concentration of ion-dense phases. This will advance our understanding of selective particle uptake by cancerous cells, shifting from descriptive observations to mechanistic insights into cellular processes. Since HA is not only associated with cancer but is also present in bones and teeth and commonly used as a biomaterial, insights from this research may enhance our understanding of cellular responses to HA in other tissues.
DOI: 10.15468/dl.bnfz2x
title: Occurrence Download

description: A dataset containing 1181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cyperus amabilis Vahl)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 1181 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015546-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57710/alba-es-2024088565
title: Cytosolic crowding by age-dependent neuromelanin accumulation: relevance to Parkinson's disease and brain aging.

description: Parkinson’s disease (PD) is the most common neurodegenerative movement disorder and the fastest growing neurological disorder in the world. Despite the availability of symptomatic treatments, PD remains to date an incurable disease as existing treatments do not modify the neurodegenerative process nor the disease course. In PD there is a preferential degeneration of neurons containing high levels of neuromelanin, a dark-brown cytoplasmic pigment that accumulates with age in the human brain. While neuromelanin does not appear spontaneously in most animal species, including rodents, we recently developed the first rodent models of human-like neuromelanin production based on the overexpression of human melanin-producing enzyme tyrosinase. This has revealed that increased neuromelanin accumulation above a pathogenic threshold is sufficient to trigger neuronal dysfunction/degeneration and replicate many features of PD. Relevant to humans, intracellular neuromelanin levels reach this pathogenic threshold in PD patients and pre-PD subjects. However, the molecular mechanisms driving neuromelanin-linked PD pathology remain uncertain. Here, by taking advantage of a unique neuromelanin-producing cellular model, we propose to assess the three-dimensional (3D) spatial ultrastructure of these cells by cryosoft X-ray tomography (cryo-SXT) as they progressively accumulate neuromelanin, as in humans. We hypothesize that age-dependent accumulation of neuromelanin, until occupying most of the neuronal cytoplasm, leads to an overcrowded cytoplasmic environment filled with vesicular structures and dysmorphic organelles that contribute to neuronal dysfunction and degeneration associated with PD and, in a broader sense, brain aging. The results from this proposal could offer new insights into the pathogenesis of PD and establish a foundation for developing novel therapeutic strategies for this currently incurable condition.
DOI: 10.15468/dl.q2cn7u
title: Occurrence Download

description: A dataset containing 206603 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is France",
 "DatasetKey is Inventaire des oiseaux nicheurs de France métropolitaine 2009-2012 - Oiseaux nicheurs de France métropolitaine 2009-2012 - Nidification certaine",
 "IucnRedListCategory is one of (EN, VU, NT, LC, DD, NE)",
 "License is CC-BY 4.0"
 ]
}

 The dataset includes 206603 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015540-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57710/alba-es-2024098713
title: UNDERSTANDING THE BACTERICIDAL POTENTIAL OF NANOSTRUCTURED CALCIUM PHOSPHATES (continuation)

description: One of the main challenges we face when using synthetic bone grafts to restore bone function is the risk of infection. One strategy to fight infection is to use synthetic bone grafts with bactericidal topographies consisting of nanopillars capable of deforming and breaking down the bacterial wall. We have recently developed synthetic calcium phosphates with potentially bactericidal nanotopographies. However, the precise mechanisms governing this antimicrobial process remain elusive. Moreover, being CaP a bioactive material, the ionic exchanges with the environment can influence the microbial response. To elucidate these mechanisms, we propose cryo-soft X-ray tomography and spectromicroscopy at the Ca L2,3-absorption edge. In this study, bacteria (Bacillus subtilis, BS) were incubated on CaP materials with different nanotopographies (small and large pillars) and control surfaces (flat CaP and glass). Tomography at the Ca L2-edge allowed to detect higher levels of Ca concentration in the l cytosol of some bacteria exposed to the CaP surfaces, revealing a gradient: flat CaP &gt; large pillars &gt; small pillars &gt; glass coverslip. Ca maps at the Ca L2-edge visualized the bacteria's shape on the CaP materials but not on the glass coverslip. XANES spectra confirmed the presence of Ca within some bacteria. Moreover, tomographies at 520 eV (maximum carbon absorption contrast) revealed notable differences in the cellular ultrastructure between BS incubated on small CaP pillars and the glass control. These differences included the formation/absence of multivesicles, changes in membrane integrity, and varying degrees of DNA condensation. However, due to the limited time, we were not able to analyse the samples of bacteria incubated on large nanopillars and a flat CaP surface. We request 1 day (3 shifts) to acquire tomographies at 520 eV of bacteria incubated on these two surfaces to complete our study.