cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/y6xjbjcgz8
title: Docking of Dengue virus type 1 or West Nile Virus surface antigen with SARS-CoV-2 Spike antibody

description: Docking of SARS-CoV-2 Spike antibody with surface antigen of Dengue virus type 1 or West Nile Virus using ClusPro and ZDOCK
DOI: 10.17632/tnsgf7v76z
title: Hydrogen permeation test on MS AHSS grade 1300

description: Devanathan-Stachurski permeation tests were carried out on a grade 1300 Martensitic Advanced High Strength Steel (MS-AHSS) to obtain the effective diffusivity coefficient.

Financed by the European Union - NextGenerationEU (National Sustainable Mobility Center CN00000023, Italian Ministry of University and Research Decree n. 1033 - 17/06/2022, Spoke 11 - Innovative Materials & Lightweighting). The opinions expressed are those of the authors only and should not be considered as representative of the European Union or the European Commission’s official position. Neither the European Union nor the European Commission can be held responsible for them. 

Keywords: Spoke11 - CNMS MOST, Ferrous alloys
DOI: 10.17632/93t6bbmkjm
title: Research data

description: Table S1. The lattice information of tobermorite (the data are from ICSD) Table S2. The crystal parameter of tobermorite 9Å Table S3. The crystal parameter of tobermorite 11Å Table S4. The crystal parameter of tobermorite 14Å The snapshot of three models (Fig. S1. Molecular structure of (a) tobermorite 9Å, (b) tobermorite 11Å, and (c) tobermorite 14Å in x,y, and z planes) Table S5 Stress and strain data for tobermorite 9Å, 11Å, and 14Å
DOI: 10.17632/md5czfsfnd
title: data of multiple-type drug-drug interactions

description: DDI_data.csv file is we extracted from drug bank v5.1, it includes the five items: Drug1_id, Drug2_id, Drug1_name, Drug2_name, and the interaction types between Drug1 and Drug2. DDI_types.xlsx file includes 114 types of DDI and the class index after merged them. DDI_types_merged.xlsx includes the type name of interactions and their corresponding ID.
DOI: 10.17632/zvc4jx8prt
title: Data of Vietnamese’s life in COVID-19 pandemic

description: This research mentions Vietnamese’s life over the country, from the North to the Central and the South during COVID-19 pandemic through 590 volunteers from 15 to 76 years old, in multiple demographic profiles, answering our question. Data was collected by online questionnaire, purposefully on social networking platforms commonly used in Vietnam, Facebook and Zalo, taking place from June 15 to June 25, 2021 using the snowball techniques. SPSS software version 20.0 is used for descriptive statistics analysis, correlation test and reliability assessment of Likert scale; from there, helping to detect risks, typical daily living habits, special psychosocial status in the context of the COVID-19 pandemic and key solutions (at individual and national level) in response to the severe impacts of the pandemic. The data set can be a reference source for in-depth surveys on social life, building analytical models, forecasting the specific mood of society in crisis and implicating many important policy solutions so that countries with similar economic, cultural and social characteristics to Vietnam can learn, adapt and overcome the disaster caused by COVID-19.
DOI: 10.17632/vwtgfj5vzg
title: ofc_units_ca_odor_disc

description: unit recording and imaging during 4-odor go/no-go discrimination learning
DOI: 10.17632/sz6f8z3g3z
title: Single machine scheduling problem - Total Early Work

description: The benchmark set of instances  is generated following instructions provided in the paper of Ben-Yehoshua and Mosheiov [1].

follows. Each instance is characterized by the number n of jobs to schedule, the maximum processing time of a job Pmax, and the density of due-dates alpha.
In the benchmark data set n takes value from the set {20, 50, 100, 200, 500, 1000, 10000}, Pmax varies in the set {50,100, 250, 500,1000}, while the tightness factor alpha takes value 0.7 or 1.0.
For each combination of  n, Pmax, alpha values, 10 different instances are generated.
In each of ten instances, processing times of jobs are chosen uniformly from the interval [1, Pmax], while  the due dates are chosen uniformly from the interval [1, alpha *SumP], where SumP is the sum of the processing times of the jobs.
The generated benchmark set is divided into three subsets according to the problem size/difficulty:
i) small instances with n <= 200, 
ii) medium instances with n in {500, 1000} and 
iii) large instances with n=10000.

REFERENCE :
[1] Ben-Yehoshua, Y., & Mosheiov, G. (2016). A single machine scheduling problem to minimize total early work. Computers & Operations Research, 73, 115-118.
DOI: 10.17632/wvd8vzx9xc
title: Data for: Radiolysis of Phenylalanine in solution with Bragg-Peak energy protons

description: Differential yields of radiolysis products
DOI: 10.17632/4rhcbhxthh
title: Evaluación de la accesibilidad web de estamentos universitarios en Chile

description: El presente trabajo muestra los resultados de un estudio de accesibilidad web de instituciones universitarias en Chile. El análisis ha sido elaborado en base al estándar internacional WCAG 2.0 establecido por el World Wide Web Consortium.
DOI: 10.6084/m9.figshare.13950503.v1
title: The modified 6-node thermal network

description: 修改后的6节点热网包括5条管道，1个CHP单元（是背压 式涡轮机）和3个热交换站。
DOI: 10.17632/k8d386ndz6
title: HNF4A is required to specify glucocorticoid action in the liver

description: The glucocorticoid receptor (GR) is a nuclear hormone receptor critical to the regulation of energy metabolism and the inflammatory response. The actions of GR are highly dependent on cell type and environmental context. Here, we demonstrate the necessity for liver lineage-determining factor hepatocyte nuclear factor 4A (HNF4A) in defining liver-specificity of GR action. In normal mouse liver, the HNF4 motif lies adjacent to the glucocorticoid response element (GRE) at GR binding sites found within regions of open chromatin. In the absence of HNF4A, the liver GR cistrome is remodelled, with both loss and gain of GR recruitment evident. Loss of chromatin accessibility at HNF4A-marked sites leads to loss of GR binding at weak GRE motifs. GR binding and chromatin accessibility are gained at sites characterised by strong GRE motifs, which typically show GR recruitment in non-liver tissues.  The functional importance of these HNF4A-regulated GR sites is further demonstrated by evidence of an altered transcriptional response to glucocorticoid treatment in the Hnf4a-null liver.

This Mendeley Data repository contains supportive data and code for our paper. Methods are described in the text. All experiments conducted on mouse (Mus musculus) liver, all processed data derived from raw sequencing data aligned to the mm10 genome. Differential GR binding analysis incorporated spike-in normalisation (spiked-in Drosophila melanogaster chromatin; reads aligned to dm6 genome).

The "MACS2 GR ChIP-seq peaks, wildtype liver" folder contains the BED files for GR ChIP-seq peaks called in dexamethasone- or vehicle-treated mouse liver (Figures 1 & S1).

The "Output of differential binding and differential expression analyses" folder contains the edgeR, stageR and csaw output, following the methods described in the text, using the code in the "Code for differential binding, differential accessibility and differential expression analyses" folder (Figures 2, 5, S3).

The "HOMER motif discovery" folder contains screenshots of the output from HOMER (http://homer.ucsd.edu/homer/ngs/peakMotifs.html) motif discovery analysis of GR binding sites and sites of differential chromatin accessibility (Figures 1, S1, 2, 4).

The "GIGGLE output" folder contains the output (csv) from GIGGLE analysis of GR binding sites, run through the Cistrome DB Toolkit portal (http://dbtoolkit.cistrome.org/) (Figure 3).

The "Output of csaw differential accessibility analysis" folder contains the output from csaw analysis of ATAC-seq data (Figure 4).
DOI: 10.17632/gg5f34dm9j
title: association between plantar arch and genu recurvatum among college going students

description: BACKGROUND: The lower limb biomechanics play a crucial role in maintaining proper posture, stability, and gait. The plantar arch, a complex structure of bones, muscles, and ligaments in the foot, acts as a shock absorber and contributes to efficient weight distribution. Genu recurvatum, characterized by hyperextension of the knee joint beyond a straight leg, can lead to various complications like pain, instability, and increased risk of injuries.
Despite extensive research on lower limb biomechanics, the potential link between plantar arch morphology and genu recurvatum in young adults remains relatively unexplored. University students, engaging in prolonged sitting or physically demanding activities, may be particularly susceptible to musculoskeletal problems.
OBJECTIVE: This study aims to investigate the potential association between plantar arch morphology and genu recurvatum in a university student population. The primary objective is to determine if a correlation exists between different foot arch types (e.g., flat feet, high arches) and the degree of knee hyperextension.
METHOD: This observational study investigated the relationship between plantar arch morphology and genu recurvatum in university students (18-25 years old) at Maharishi Markandeshwar University, India. A purposive sampling technique yielded 57 participants with knee hyperextension (&gt;5 degrees). Plantar arch index was measured using footprints, and genu recurvatum angle was assessed with a goniometer. Demographic data (height, weight, BMI) was also collected. Statistical analysis using IBM SPSS 26.0 aimed to identify correlations between these measures.
RESULT: The study investigated the demographic attributes and their interrelationships among 57 participants. Kolmogorov-Smirnov tests revealed non-normal distributions for age, weight, BMI, and GR angle. However, height and PAI showed normal distributions. Spearman correlation analyses indicated no significant correlation between weight and PAI (r = 0.072), height and PAI (r = 0.116), PAI and BMI (r = 0.20), GR angle and weight (r = -0.245), GR angle and height (r = -0.206), or GR angle and BMI (r = -0.175). However, a significant correlation was found between GR angle and PAI (r = 0.375, p = 0.004). These findings suggest that while certain demographic attributes exhibit non-normal distributions, there is limited correlation between them, except for a notable association between GR angle and PAI.
CONCLUSION: This study suggests a link between flat feet (low plantar arch) and hyperextended knees (genu recurvatum) in college students. Understanding foot structure may be crucial for assessing lower limb posture and injury risk in young adults. Further research can confirm this association and inform preventive strategies for musculoskeletal problems.
DOI: 10.6084/m9.figshare.25827505.v1
title: Dataset for Indicators of temporal variability in Connectivity

description: Dataset of dimensions: 5 325 780 x 10.Each row is a particle.<b>Column 1</b>, ID_Part, is the ID of the particle.<b>Column 2</b>, Year, is the release year in the PTM simulation (2008, 2014, 2018, or clim).<b>Column 3</b>, Month, is the release month in the PTM simulation (1-12)<b>Column 4</b>, Depth, is the release depth in the PTM simulation ("surf" for surface, "bott" for bottom)<b>Column 5</b>, ID_Source, is the ID of the release zones (8,9,10,21 are MPAs, -1 are sites out of MPAs)<b>Columns 6-9</b>, ID_SinkX, are the ID of the destination zones when transport duration has been 5 days (ID_Sink5), 10 days (ID_Sink10), 15 days (ID_Sink15) and 30 days (ID_Sink30). If the values = -1, it corresponded to a zone out of MPAs. The remaining values are the ID of the MPAs.<b>Column 1</b><b>0</b>, Count, is a single value 1, used for the computation of the indicators.
DOI: 10.17632/yx3bj2rw3g
title: User subroutine for modeling transient swelling of hydrogels with Abaqus
DOI: 10.17632/b637d4rx3k
title: About time: synchrony in onset of parental care influences cooperation and offspring performance in a burying beetle

description: This data file consists of a comma separated values spreadsheet (.csv), which provides data on the effects of synchrony in the onset of parental care on parental cooperation. Each line in the spreadsheet represents a pair. 

pair_id – individual ID of the pair.
m_treatment – male experimental treatment
f_treatment – female experimental treatment.
m_mass_before_breeding – male mass before breeding (g).
m_mass_after_breeding – male mass upon larval dispersal from the carcass(g).
f_mass_before_breeding – female mass before breeding (g).
f_mass_after_breeding – female mass upon larval dispersal from the carcass(g).
carcass_mass – mass of the mouse provided to the pair for breeding (g).
f_direct – number of scans spent providing direct care to the larvae by the female.
f_indirect – number of scans spent providing indirect care to the larvae by the female.
m_direct – number of scans spent providing direct care to the larvae by the male.
m_indirect – number of scans spent providing indirect care to the larvae by the male.
number_larvae – number of larvae that dispersed from the carcass.
average_larval_mass – the average larval mass of the brood upon dispersal from the carcass (g).
DOI: 10.17632/hv5k9fym57
title: Data set on the free fatty acid, peroxide value, and moisture contents during thermal degradation of coconut oil

description: Continuous deep frying of food using oil is a common practice, but the oil undergoes degradation upon thermal treatment making it unfit for consumption. How can we determine when the oil is still safe for use in deep frying? The data set shows the investigation on the thermal degradation of edible coconut oil sans any food matrix by analyzing changes in free fatty acid (FFA), peroxide value (PV), and moisture content (MC) as the oil alone was heated at around deep-frying temperatures (150, 175, and 200 °C) for 1-12 hours. Hourly monitoring reveal that increased temperature and heating time lead to higher FFA, PV, and MC, indicating oil degradation. The data can be used to assess the quality and stability of coconut oil during thermal degradation. These values provide insights into the degree of chemical changes, oxidation, and moisture absorption occurring in the oil under different heating conditions. The values can be compared with industry standards and regulatory guidelines to ensure that the coconut oil meets the required quality thresholds. Monitoring these parameters helps prevent the formation of harmful compounds and ensures the oil is safe for consumption. The data can also be used in optimizing the processing conditions and storage practices for coconut oil to enhance its stability, shelf life, and overall quality.
DOI: 10.6084/m9.figshare.3593259.v3
title: planck keymap

description: keymap for the planck
DOI: 10.17632/9p44zzm595
title: Enduring Positivity: Children of Incarcerated Parents Report More Positive Than Negative Emotions When Thinking About Close Others

description: Materials for article entitled, "Enduring Positivity: Children of Incarcerated Parents Report More Positive Than Negative Emotions When Thinking About Close Others"
DOI: 10.17632/j5ywpd2p27
title: A skin lesion hair mask dataset with fine-grained annotations

description: The largest publicly available skin lesion hair segmentation mask dataset created by carefully annotating 500 copyright-free CC0 licensed dermoscopic images collected from ISIC 2018 dataset [1]. The dataset is organized into three folders namely dermoscopic_image, hair_mask, and overlay. The dermoscopic_image folder contains 500 handpicked dermoscopic images covering different hair patterns. We retained the original names of the image files from the primary image source. The hair_mask folder contains a binary segmentation mask for each of the images of the dermoscopic_image folder. In a segmentaion mask image, white pixels represent skin hair and black pixels represent background. The overlay folder contains hair mask images superimposed on the original dermoscopic images. We provided the superimposed images for easy public verification so that, other people can report any annotation mistakes and contribute to improving the dataset. Images in the hair_mask and overlay folders share the same names as the primary images in the dermoscopic_image folder.

[1] Codella N, Rotemberg V, Tschandl P, Celebi ME, Dusza S, Gutman D, et al. Skin Lesion Analysis Toward Melanoma Detection 2018: A Challenge Hosted by the International Skin Imaging Collaboration (ISIC) 2019. https://doi.org/10.48550/arxiv.1902.03368.
DOI: 10.6084/m9.figshare.3502802.v2
title: Historical land use/land cover maps for India (1956-2010)

description: Annual land use/land cover maps for the Indian subcontinent between 1956-2010 at 5 arcminute by 5 arcminute spatial resolution. <br>
DOI: 10.6084/m9.figshare.3971928.v1
title: Supplementary Material for: Molecular Epidemiology of Human Metapneumovirus in Riyadh Province, Saudi Arabia

description: Human metapneumovirus (HMPV) is an important cause of respiratory tract illness in children. Two HMPV subgroups, A and B, and four genotypes, A1, A2, B1 and B2, have been identified. Concurrent circulation of the different genotypes in yearly epidemics has been recorded globally, but not in Saudi Arabia. The current report was designed to study HMPV epidemiology in Saudi children and to analyze the genetic diversity and circulation patterns. Nasopharyngeal aspirates (n = 174) were collected from hospitalized children in Riyadh (2008-2009). The screening of samples using real-time RT-PCR identified 19 HMPV strains. The majority of the strains belonged to subgroup B, while all strains of subgroup A were members of genotype A2. In 2008, only subgroup B was recognized, whereas in 2009 both subgroups were identified to be cocirculating at similar rates. The full-length attachment (G) gene and a partial sequence of the fusion (F) gene of positive samples were sequenced. The G gene showed a high degree of genetic diversity and exhibited a variable number of positively selected sites in different lineages. In contrast, the F gene demonstrated an extensive genetic stability with a higher tendency toward purifying selection. This is the first report on HMPV genotype circulation in Saudi Arabia; however, the exact circulation kinetics requires further retrospective and prospective study.<br>
DOI: 10.17632/8wc363kshw
title: The burden of head-and-neck dermatitis in adults with atopic dermatitis and its association with asthma, rhinitis, and disease severity

description: Supplementary material for the manuscript 'The burden of head-and-neck dermatitis in adults with atopic dermatitis and its association with asthma, rhinitis, and disease severity'.
DOI: 10.17632/dt4jbz7vk4
title: Dataset to Accompany: Geotemporospatial and Causal Inferential Epidemiological Analysis of US Survey and Overview of Cannabis, Cannabidiol and Cannabinoid Genotoxicity Expressed in Cancer Incidence 2003–2017

description: Data accompanies article of the above title
DOI: 10.17632/k5t2fzbd79
title: knowledge and practice of menstrual hygiene, A cross sectional study among high school girls in Mangalore Taluk

description: Knowledge on menstrual hygiene and practicing, it plays a critical role in preserving the health of women around the world. The unsafe menstrual hygiene practices (MHP) that lead to an overall lower quality of life. However, menstrual health and hygiene demands can be unmet in poor nations due to gender inequity, prejudiced societal norms, cultural taboos, poverty, and a lack of basic amenities like restrooms and sanitary products.The study concluded that most of the high school girls in Mangalore Taluk were following an average level of MHP. A small number of people were still falling behind due to their ignorance and inexperience. It is very important to set up suitable disposal facilities in schools and to organise awareness campaigns on good menstrual hygiene habits. Thus, it contributes to improving quality of life.
DOI: 10.6084/m9.figshare.13046735.v2
title: [UPDATED] Supplementary File: Sequence alignments of selected candidate HGTs in the genome of the choanoflagellate S. rosetta used in phylogenetic analysis

description: Peptide sequences of 130 candidate HGTs of S. rosetta aligned with representative sequences from selected metazoa, eukaryotic, and prokaryotic taxa using MAFFT version 7.
DOI: 10.6084/m9.figshare.28938797.v1
title: hcpaTemplateT1.nii.gz

description: HCP Aging T1 Template
DOI: 10.17608/k6.auckland.19134698.v1
title: Hyperspectral imaging generated adulterated honey dataset

description: This is a generated dataset of hyperspectral images of adulterated honey. The dataset was generated using a variational autoencoder and a latent space transform based on the ground truth honey adulteration data. The generated data utilises the larger dataset of botanical origins honey, and covers the same brands and classes of honey at each adulteration concentration (0%, 5%, 10%, 25%, 50%). This is a generated dataset, so is not strictly real ground-truth data, however the trends followed in the generated data are similar to the ground-truth adulteration. This dataset presents a reasonable approximation of a larger dataset of adulterated honey.
DOI: 10.6084/m9.figshare.22582387.v1
title: Dataset for Towards an Automatic Optimisation Model Generator Assisted with Generative Pre-trained Transformer.

description: Dataset for Towards an Automatic Optimisation Model Generator Assisted<br> with Generative Pre-trained Transformer <br> Preprint: https://doi.org/10.48550/arXiv.2305.05811 <br> Abstract: This article presents a framework for generating optimisation models using a pre-trained generative transformer. The framework involves specifying the features that the optimisation model should have and using a language model to generate an initial version of the model. The model is then tested and validated, and if it contains build errors, an automatic edition process is triggered. An experiment was performed using MiniZinc as the target language and two GPT-3.5 language models for generation and debugging. The results show that the use of language models for the generation of optimisation models is feasible, with some models satisfying the requested specifications, while others require further refinement. The study provides promising evidence for the use of language models in the modelling of optimisation problems and suggests avenues for future research.
DOI: 10.17632/76m24zdxcb
title: Gujarati News Article Text Dataset

description: The Gujarati News Article Text Dataset (GNATD) is a comprehensive collection of meticulously curated news articles in the Gujarati language. This dataset encompasses a diverse range of topics, including politics, economics, culture, sports, entertainment, and more, providing a rich and varied corpus of information in Gujarati. This dataset is a valuable resource for researchers and developers working on natural language processing (NLP) tasks and machine learning applications specifically in the context of the Gujarati language.
DOI: 10.17632/jh4wt3wbbw
title: Data for: Landslide mobilization rates: a global analysis and model

description: Compiled dataset of observed landslide mobilization rates (LMR, [m³/km/y]) and map of the predicted global patterns of LMR (GeoTiff Format). Details on the procedures used are discussed in the paper.
DOI: 10.17632/7r5fnrhyky
title: Dataset of information competences and first-semester grades

description: Dataset including self-perceived and observed information competences scores, previous academic achievement, and first-semester grades for 153 engineering students.