cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16634647
title: nf-core/proteinfamilies reproducibility benchmark results

description: To evaluate the applicability of the nf-core/proteinfamilies pipeline, we explored how well the automatically generated protein families produced by the pipeline matched expert curated protein families from established databases (NCBIFAM, PANTHER, Pfam, and HAMAP), which have undergone extensive curation, including multiple rounds of search and refinement.

This upload contains the original family FASTA files,  the additional UniProt-SwissProt sequences, and the generated family models and alignments.
DOI: 10.22002/kkt66-54156
title: Pseudomonas aeruginosa

description: Raw data files of Pseudomonas aeruginosa
description: <strong>Tilt Series Date:</strong> 2018-12-21</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> PA14 flgI::MrT7 (Tn)</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> None</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> These cells were obtained from Diana Newman lab (cells given by the lab manager Shannon Park) from the transposon library. This is number (4658) from the non-redundant list (FLgI mutant).</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-3/rawdata/</p>Pseudomonas_dflgI.mrc,  Tilt Series (Pixel Size 0.53 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-3/rawdata/Pseudomonas_dflgI.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pseudomonas_dflgI_full.rec,  Reconstruction (Pixel Size 2.12 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-3/3dimage_99802/Pseudomonas_dflgI_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/w2ra4-n2e84
title: C. crescentus NA1000 Tad pilus

description: C. crescentus NA1000 Tad pilus project. The goad is to get an STA of the Tad pilus secretion system.
description: <strong>Tilt Series Date:</strong> 2019-08-17</p>
<strong>Data Taken By:</strong> Steven Wang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> None</p>
<strong>Collaborators and Roles:</strong> Patrick Viollier and Lujia Zhang</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Swarmer cells purified using Percoll (colloidal silica). Cultured using M2G media.</p>
<strong>Sample Preparation:</strong> 10 nm gold beads. Blotting force 4, blotting time 4, draining time 1. Quantifoil copper grids.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-08-17-64/rawdata/</p>caulobacter_na1000_wt_065_af.mrc,  Tilt Series (Pixel Size 0.336 nm), 3.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-08-17-64/rawdata/caulobacter_na1000_wt_065_af.mrc"
        > <i class="download icon"></i> Download </a></p>

        caulobacter_na1000_wt_065_af.mrc.mdoc,  811.0 B  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-08-17-64/rawdata/caulobacter_na1000_wt_065_af.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.34740/kaggle/dsv/12871325
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.6084/m9.figshare.29487904
title: Development and analysis of three luminescent mixed-ligand Pb(II) coordination frameworks for electroluminescent applications

description: This study presents the synthesis and characterization of three luminescent mixed-ligand Pb(II) coordination complexes, [Pb<sub>2</sub>(PhN<sub>2</sub>O<sub>2</sub>)<sub>4</sub>] (<b>1</b>), [Pb(PhN<sub>2</sub>O<sub>2</sub>)<sub>2</sub>(phen)] (<b>2</b>) and [Pb(Cup)(dmphen)(NO<sub>3</sub>)]<sub>n</sub> (<b>3</b>), using lead nitrate and ligands cupferron (Cup), 1,10-phenanthroline (phen), and 2,9-dimethyl-1,10-phenanthroline (dmphen). The complexes were analyzed <i>via</i> IR and UV spectroscopy, elemental analysis, and X-ray diffraction, revealing that the presence of methyl groups on the phenanthroline ligand in dmphen led to the formation of a unique one-dimensional zigzag coordination polymer (3), while the phenanthroline-based complex (2) adopted a mononuclear structure. The molecular arrangements were influenced by substituents on the phenanthroline ligand and interactions such as Pb…π, C-H…π, π…π stacking, and hydrogen bonding. Thermogravimetric analysis confirmed the high thermal stability of the compounds. Optical studies highlighted their potential for optoelectronic applications, with compound 3 being used to fabricate organic light-emitting diodes (OLEDs). The electroluminescence (EL) spectrum of the device exhibited a blue shift compared to its photoluminescence (PL) spectrum. Electron mobility was evaluated using the space-charge-limited current (SCLC) method, and the current-voltage properties of the OLEDs were examined. The results demonstrate the potential of these Pb(II) coordination complexes as precursors for optical devices, with the ability to fine-tune their properties through ligand modification.
DOI: 10.6084/m9.figshare.29487904.v2
title: Development and analysis of three luminescent mixed-ligand Pb(II) coordination frameworks for electroluminescent applications

description: This study presents the synthesis and characterization of three luminescent mixed-ligand Pb(II) coordination complexes, [Pb<sub>2</sub>(PhN<sub>2</sub>O<sub>2</sub>)<sub>4</sub>] (<b>1</b>), [Pb(PhN<sub>2</sub>O<sub>2</sub>)<sub>2</sub>(phen)] (<b>2</b>) and [Pb(Cup)(dmphen)(NO<sub>3</sub>)]<sub>n</sub> (<b>3</b>), using lead nitrate and ligands cupferron (Cup), 1,10-phenanthroline (phen), and 2,9-dimethyl-1,10-phenanthroline (dmphen). The complexes were analyzed <i>via</i> IR and UV spectroscopy, elemental analysis, and X-ray diffraction, revealing that the presence of methyl groups on the phenanthroline ligand in dmphen led to the formation of a unique one-dimensional zigzag coordination polymer (3), while the phenanthroline-based complex (2) adopted a mononuclear structure. The molecular arrangements were influenced by substituents on the phenanthroline ligand and interactions such as Pb…π, C-H…π, π…π stacking, and hydrogen bonding. Thermogravimetric analysis confirmed the high thermal stability of the compounds. Optical studies highlighted their potential for optoelectronic applications, with compound 3 being used to fabricate organic light-emitting diodes (OLEDs). The electroluminescence (EL) spectrum of the device exhibited a blue shift compared to its photoluminescence (PL) spectrum. Electron mobility was evaluated using the space-charge-limited current (SCLC) method, and the current-voltage properties of the OLEDs were examined. The results demonstrate the potential of these Pb(II) coordination complexes as precursors for optical devices, with the ability to fine-tune their properties through ligand modification.
DOI: 10.6084/m9.figshare.29487904.v1
title: Development and analysis of three luminescent mixed-ligand Pb(II) coordination frameworks for electroluminescent applications

description: This study presents the synthesis and characterization of three luminescent mixed-ligand Pb(II) coordination complexes, [Pb<sub>2</sub>(PhN<sub>2</sub>O<sub>2</sub>)<sub>4</sub>] (<b>1</b>), [Pb(PhN<sub>2</sub>O<sub>2</sub>)<sub>2</sub>(phen)] (<b>2</b>) and [Pb(Cup)(dmphen)(NO<sub>3</sub>)]<sub>n</sub> (<b>3</b>), using lead nitrate and ligands cupferron (Cup), 1,10-phenanthroline (phen), and 2,9-dimethyl-1,10-phenanthroline (dmphen). The complexes were analyzed <i>via</i> IR and UV spectroscopy, elemental analysis, and X-ray diffraction, revealing that the presence of methyl groups on the phenanthroline ligand in dmphen led to the formation of a unique one-dimensional zigzag coordination polymer (3), while the phenanthroline-based complex (2) adopted a mononuclear structure. The molecular arrangements were influenced by substituents on the phenanthroline ligand and interactions such as Pb…π, C-H…π, π…π stacking, and hydrogen bonding. Thermogravimetric analysis confirmed the high thermal stability of the compounds. Optical studies highlighted their potential for optoelectronic applications, with compound 3 being used to fabricate organic light-emitting diodes (OLEDs). The electroluminescence (EL) spectrum of the device exhibited a blue shift compared to its photoluminescence (PL) spectrum. Electron mobility was evaluated using the space-charge-limited current (SCLC) method, and the current-voltage properties of the OLEDs were examined. The results demonstrate the potential of these Pb(II) coordination complexes as precursors for optical devices, with the ability to fine-tune their properties through ligand modification.
DOI: 10.22002/mqs32-fs548
title: P. gingivalis PorV mutant

description: Raw data files of P. gingivalis PorV mutant
description: <strong>Tilt Series Date:</strong> 2019-01-23</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Sample Preparation:</strong> Liquid culture. Harvested and plunge-frozen in late phase.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2019-01-23-2/rawdata/</p>2-PorV-11.mrc,  Tilt Series (Pixel Size 0.3519 nm), 1.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2019-01-23-2/rawdata/2-PorV-11.mrc"
        > <i class="download icon"></i> Download </a></p>

        2-PorV-11_full.rec,  Reconstruction (Pixel Size 1.4076 nm), 267.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2019-01-23-2/3dimage_100499/2-PorV-11_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.pthna6
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Papaver rhoeas",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 129 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045333-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/4226b-vh829
title: Legionella delta DotO

description: Strain from Yale
description: <strong>Tilt Series Date:</strong> 2019-01-15</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 53000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Jun Liu</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Early stationary phase, broad vitrobot, R2/2 quantifoil 200 mesh copper grid</p>
<strong>Sample Preparation:</strong> 10 nm gold beads</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-01-15-6/rawdata/</p>tilt_46.mrc,  Tilt Series (Pixel Size 0.27 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-01-15-6/rawdata/tilt_46.mrc"
        > <i class="download icon"></i> Download </a></p>

        tilt_46_full.rec,  Reconstruction (Pixel Size 1.08 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-01-15-6/3dimage_100991/tilt_46_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ybkv8-5jy50
title: Caulobacter crescentus

description: Raw data files of Caulobacter crescentus
description: <strong>Tilt Series Date:</strong> 2018-07-10</p>
<strong>Data Taken By:</strong> Lujia Zhang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> For the research of pilus, over-express, from Partick, 4331</p>
<strong>Purification / Growth Conditions / Treatment:</strong> swarmer cell, PVP</p>
<strong>Sample Preparation:</strong> force 4, time 6, humidity 100%, temp. 22</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-10-32/rawdata/</p>targ29.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-10-32/rawdata/targ29.mrc"
        > <i class="download icon"></i> Download </a></p>

        targ29_full.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-10-32/3dimage_100122/targ29_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/0cst4-pcb73
title: JV9264

description: Raw data files of JV9264
description: <strong>Tilt Series Date:</strong> 2018-09-06</p>
<strong>Data Taken By:</strong> Jun Zhang</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joseph</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 37 degree and OD 2.5-3.0</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-23/rawdata/</p>JV9264_B12.mrc,  Tilt Series (Pixel Size 0.2654 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-23/rawdata/JV9264_B12.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9264_B12_part55_17.rec,  Reconstruction (Pixel Size 1.0616 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-23/3dimage_97784/JV9264_B12_part55_17.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1j812-d2457
title: C. crescentus NA1000 Tad pilus

description: C. crescentus NA1000 Tad pilus project. The goad is to get an STA of the Tad pilus secretion system.
description: <strong>Tilt Series Date:</strong> 2019-08-17</p>
<strong>Data Taken By:</strong> Steven Wang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> None</p>
<strong>Collaborators and Roles:</strong> Patrick Viollier and Lujia Zhang</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Swarmer cells purified using Percoll (colloidal silica). Cultured using M2G media.</p>
<strong>Sample Preparation:</strong> 10 nm gold beads. Blotting force 4, blotting time 4, draining time 1. Quantifoil copper grids.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-08-17-68/rawdata/</p>caulobacter_na1000_wt_069_af.mrc,  Tilt Series (Pixel Size 0.336 nm), 3.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-08-17-68/rawdata/caulobacter_na1000_wt_069_af.mrc"
        > <i class="download icon"></i> Download </a></p>

        caulobacter_na1000_wt_069_af.mrc.mdoc,  813.0 B  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-08-17-68/rawdata/caulobacter_na1000_wt_069_af.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/dtf1j-ctm26
title: P. gingivalis wild type

description: Raw data files of P. gingivalis wild type
description: <strong>Tilt Series Date:</strong> 2020-11-06</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown and harvested from plates</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-81/rawdata/</p>PginWT9_080.mrc,  Tilt Series (Pixel Size 0.333 nm), 1.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-81/rawdata/PginWT9_080.mrc"
        > <i class="download icon"></i> Download </a></p>

        PginWT9_080_part41_3.rec,  Reconstruction (Pixel Size 1.332 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-81/3dimage_115134/PginWT9_080_part41_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/48awt-2cf41
title: C. crescentus NA1000 Tad pilus

description: C. crescentus NA1000 Tad pilus project. The goad is to get an STA of the Tad pilus secretion system.
description: <strong>Tilt Series Date:</strong> 2019-08-17</p>
<strong>Data Taken By:</strong> Steven Wang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> None</p>
<strong>Collaborators and Roles:</strong> Patrick Viollier and Lujia Zhang</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Swarmer cells purified using Percoll (colloidal silica). Cultured using M2G media.</p>
<strong>Sample Preparation:</strong> 10 nm gold beads. Blotting force 4, blotting time 4, draining time 1. Quantifoil copper grids.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-08-17-45/rawdata/</p>caulobacter_na1000_wt_046_af.mrc,  Tilt Series (Pixel Size 0.336 nm), 3.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-08-17-45/rawdata/caulobacter_na1000_wt_046_af.mrc"
        > <i class="download icon"></i> Download </a></p>

        caulobacter_na1000_wt_046_af.mrc.mdoc,  814.0 B  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/swy2019-08-17-45/rawdata/caulobacter_na1000_wt_046_af.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/c7bp3-jzq74
title: Caulobacter crescentus

description: Raw data files of Caulobacter crescentus
description: <strong>Tilt Series Date:</strong> 2018-07-10</p>
<strong>Data Taken By:</strong> Lujia Zhang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> For the research of pilus, over-express, from Partick, 4331</p>
<strong>Purification / Growth Conditions / Treatment:</strong> swarmer cell, PVP</p>
<strong>Sample Preparation:</strong> force 4, time 6, humidity 100%, temp. 22</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-10-1/rawdata/</p>targ21.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-10-1/rawdata/targ21.mrc"
        > <i class="download icon"></i> Download </a></p>

        targ21_part120_2.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-10-1/3dimage_100063/targ21_part120_2.rec"
        > <i class="download icon"></i> Download </a></p>