cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1314459.v10
title: Portal Project Teaching Database

description: The Portal Project Teaching Database is a simplified version of the Portal Project Database designed for teaching. It provides a real world example of life-history, population, and ecological data, with sufficient complexity to teach many aspects of data analysis and management, but with many complexities removed to allow students to focus on the core ideas and skills being taught. The database is currently available in csv, json, and sqlite. This database is not designed for research as it intentionally removes some of the real-world complexities. The original database is published at Ecological Archives(http://esapubs.org/archive/ecol/E090/118/) and this version of the database should be used for research purposes. The Python code used for converting the original database to this teach version is included as 'create_portal_teach_dataset.py'. Suggested changes or additions to this dataset can be requested or contributed in the project GitHub repository(https://github.com/weecology/portal-teachingdb).
DOI: 10.6084/m9.figshare.22920014.v1
title: Supplementary Material for: Burden of acute kidney injury among adult hospital patients in the Italian Lombardy Region – a 20 years real world data analysis

description: Background: Acute kidney injury (AKI) is a frequent condition, with persisted shortage of large-scale epidemiological studies. We analyzed the population-wide healthcare system of the Italian Lombardy region over the 2000-2019 period, and evaluated AKI incidence, mortality, and related healthcare resources utilization and cost in all citizens 40 years and older. Methods: The retrospective cohort analysis of an administrative claims database that routinely collects information about health care provision in a high-income region with 10 million citizens. Over 20 years, AKI was identified in 84,384 hospital discharge records by the International Classification of Diseases 9th Revision codes (mean age 77.4±11.6 years, 52.5% were males). Results: From 2000 to 2019, the AKI rates per 100,000 population changed from 32.9 to 90.5 for incidence, from 4.7 to 11.9 for mortality, and from 32.3 to 44.1 for years of life lost (YLLs), respectively. In-hospital mortality changed slightly (14.2% and 13.2%, respectively), while 30-day mortality decreased from 21.5% to 17.4%, respectively. Incidence rates increased with age and were higher in males, and varied almost four-fold between provinces. The median hospitalization cost was €4,014 (IQR 3,652; 4,134), and the annual cost of treatment risen from €5.2 million in 2000 to €22.9 million in 2019. Hemodialysis was administered in 7.4% of hospitalizations. Over the total study period the cumulative AKI burden accounted for 11,420 in-hospital deaths, 63,370.8 YLLs, and €329 million of direct cost. Conclusions: This real-world analysis demonstrates the high burden of AKI with prominent geographical differences that require further implementation of preventive and diagnostic actions.
DOI: 10.17632/8ndxtjcr3g
title: The Literature Intellectual Structure of System Dynamics on Waste (1973-2021)

description: The literature intellectual structure of system dynamics on waste research and publication dataset, which was indexed by Scopus from 1973 to 2021.
The dataset contains data authors, authors ID Scopus, title, year, source title, volume, issue, article number in Scopus, DOI, link, affiliation, abstract, index keywords, references, Correspondence Address, editors, publisher, conference name, conference date, conference code, ISSN, language, document type, access type, and EID.
DOI: 10.17632/kbhx883y8w
title: Chinese version of the preterm birth experience and satisfaction scale

description: The data was to culturally adapt and psychometrically validate the preterm birth experience and satisfaction scale in China.
DOI: 10.6084/m9.figshare.12034479.v2
title: firm-level trading data classified in states.xlsx

description: firm-level emission trading data derived from the European Union Transaction Log.
DOI: 10.6084/m9.figshare.16869293.v2
title: Base de datos sobre "Sistema Electoral del Poder Ejecutivo en América Latina y sus Reformas"

description: El Observatorio de Reformas Políticas en América Latina presenta la siguiente base de datos que contiene información sobre el Sistema Electoral del Poder Ejecutivo en América Latina y sus Reformas
DOI: 10.6084/m9.figshare.22764599.v1
title: Data set for the paper: Fish responses to underwater sounds depend on auditory adaptations

description: We compiled data on fish hearing acuity (<strong>Fish.hearing.compilation.csv</strong>) and adaptations and provided a portrait of how anthropogenic noise compares to natural sounds in different freshwater soundscapes (<strong>Underwater.soundscape.csv</strong>). We then conducted a sound-enrichment experiment to evaluate the effect of motorboat noise exposure on fish community structure, and the extent to which changes in species abundances were linked to auditory adaptations (see <strong>Sound.enrichment.experiment.fish catches and soundscape.csv</strong> for fish species caught in the experiment and the soundscape of the sound-enrichment treatment). We found that species with more specialized auditory structures (see <strong>Hearing adaptation.species.csv</strong> for hearing adaptations of species caught in the experiment) have more sensitive hearing (lower threshold and increased best frequency) and were captured less often in sound-enriched traps, indicating avoidance behavior. Our findings highlight the importance of considering species’ sensorial adaptations when evaluating the community-scale effects of noise pollution on the fish community.
DOI: 10.6084/m9.figshare.26148799.v2
title: Data for "Nitrogen deposition differentially regulates the sensitivity of gross primary productivity to extreme drought versus wetness"

description: Experimental data used for analysis in the manuscript titled "Nitrogen deposition differentially regulates the sensitivity of gross primary productivity to extreme drought versus wetness".
DOI: 10.17632/rmjxgrxsvr
title: Journal of Islamic Education; No. 49

description: The journal is set to publish original articles on a wide range of issues including;

 Philosophy of Islamic education;
 Schools and approaches to Islamic education;
 Educational jurisprudence (Fiqh);
 Foundations, principles and methodology of Islamic education;
 History of Islamic education;
 Educational thoughts, views and ideas of Muslim scholars;
 Educational sciences such as educational management, curriculum planning and educational psychology with an Islamic approach;
 Comparative studies;
 The areas and dimensions of education in Islam include religious education, devotional education, moral education, sexual education, political education, and so on;
 Methodology of research in Islamic education;
 Examining different aspects of formal education with Islamic perspective;
 Religious education in the thought of international scholars, a comparative approach to Islamic education.

JIE is an international, professional refereed journal in the interdisciplinary fields that relevant to Islamic education. JIE serves as a platform for presenting and discussing the emerging issues on Islamic education. The journal is committed in publishing high quality articles in persian and welcomes articles in English, ranging from original research papers in the area of Islamic education. This journal welcomes original and qualified researches on all aspects of Islamic education and religious education. The topics may include, but are not limited to: 
Philosophy of Islamic education, schools and approaches in Islamic education, educational Islamic jurisprudence, foundations, principles and methods of Islamic education, history of Islamic education, educational approaches and ideas of Muslim scholars, educational management, curriculum and educational planning, educational psychology with an Islamic perspective, comparative issues, areas and dimensions of education in Islam, religious education, devotional education, moral education, sexual education, political education, research methodology in Islamic education and examination of various aspects of formal education with an Islamic outlook.
DOI: 10.25403/upresearchdata.25922332.v1
title: New classification system for complex root canal morphology first molars

description: This folder contains the  stereolithography (STL) files of micro-CT scans required to 3D print illustrative models for a new suggested classification system for complex root canal configurations. Each STL file represents a configuration type within a group. The system consists of 12 basic categories or groups (A-D) each with 3 types (1-3). The folder also contains the STL files for rare types of root and canal morphologies: a C-shaped root canal system found in a maxillary first molar and a radix entomolaris tooth found on a mandibular first molar.
DOI: 10.6084/m9.figshare.14839584.v1
title: CeA Data and Analysis

description: This is the Data and associated output used for demonstrating SynapseJ finds bassoon-gephyrin synapses in CeA.
DOI: 10.6084/m9.figshare.21843585.v1
title: Integrative systematics and conservation of an endangered ground beetle Carabus nankotaizanus (Coleoptera: Carabidae) in Taiwan

description: The compressed file contains nine folders. <br> 01_ morphological measurements folder: The measurements of 12 morphological traits, including the length of the head (H), thorax (T) and elytra (E), the width of the head (HW) and elytra (EW), the widest (TW1) and narrowest (TW2) points of the thorax, head ratio (H/HW), thorax ratio (T/TW1), shrinkage of thorax (TW1-TW2/TW1), elytra ratio (E/EW), elytra marginal color proportion (EMCP, length of elytra marginal color, EMC, divided by E) and aedeagus length (AL). <br> 02_geometric folder: Six tps files for each body partition and genders ready for geometric morphometrics analyses. A group list for each tps files indicated specimen number. <br> 03_Coloration folder: The original reflectance spectrum of each individual was used for coloration analysis. <br> 04_seq_aligments folder: It contains the sequence alignment files for the four loci used in the study in fasta format. <br> 05_Phylogenetic_analyses folder: It contains the phased sequences alignment files, ML command, ML partition, BI command and the ratchet file for pauprat used in the study. <br> 06_Calibration folder: A ready to run xml file for BEAST 2 analysis to estimate divergence time of C. nankotaizanus. <br> 07_ Seasonality folder: An excel file contains four sheets: original records of seasonality from 1. Tingshan and Wujie, 2. Mingchi and 3. Mt. Taiping and 4. The activity temperature from weather station. <br> 08_ENM folder: The occurrence records of the mountain and lowland populations after thinning. <br> 09_iBPP_inputs The four required files for running iBPP analyses: sequence file, trait file,Imap file, and control file. <br>
DOI: 10.6084/m9.figshare.27322465.v1
title: Early identification of potential occupational noise-induced hearing loss: a systematic review

description: This systematic review addressed two questions: <i>1) For which audiometric test frequencies or pure tone averages are hearing threshold levels (HTLs) most susceptible to early occupational noise induced hearing loss (NIHL) before significant damage? 2) Which early flag metric best detects early hearing shifts due to noise for occupational NIHL surveillance?</i> Systematic searches were conducted in Ovid MEDLINE(R) and Embase from July 2021 to May 2024. Eligibility was screened by two independent reviewers using Covidence. HTL results were analysed for susceptibility to noise-induced changes, and sensitivity and specificity of early flag metrics were assessed. Of 175 studies retrieved, 18 met the inclusion criteria. Ten studies emphasised the importance of testing at frequencies above 8 kHz, with HTLs at 12, 14, and 16 kHz frequently identified as the most noise susceptible. Conventional frequencies of 3-6 kHz were also noted as susceptible. NIOSH and OSHA metrics had low sensitivity and specificity, but modifications improved their performance to 100% sensitivity and 98% specificity. The review highlights the need to refine current metrics and explore extended high frequencies for NIHL monitoring. Research is required to determine frequencies for warning metrics and sensitive metrics for early occupational NIHL detection.
DOI: 10.6084/m9.figshare.3386143.v1
title: Datesets for Chang, Zhou, Liu (2016, PLoS ONE)

description: To be published in PLoS ONE.
DOI: 10.17632/gtgy2ntkn9
title: The prices of renewable commodities 

description: Excel (xlsx) file containing the time series of nominal and real (US-CPI-deflated) price indexes (with annual periodicity and the base year 1900) for the 18 renewable commodities analyzed in the paper "The prices of renewable commodities: A robust stationarity analysis", by Manuel Landajo and María José Presno, to appear in Australian Journal of Agricultural and Resource Economics. The study period is 1900-2018. For further details please see the above article.
DOI: 10.6084/m9.figshare.12608420.v1
title: processed_M1336.h5

description: Preprocessed wavelet transformed signal for M1336, experiment duration roughly 40 minutes, two-photon calcium imaging
DOI: 10.6084/m9.figshare.14192081.v1
title: Supplementary Material for: Are Breast Cancer Nomograms Still Valid to Predict the Need for Axillary Dissection?

description: <b><i>Background:</i></b> Nomograms can help in estimating the nodal status among clinically node-negative patients. Yet their validity in external cohorts over time is unknown. If the nodal stage can be estimated preoperatively, the need for axillary dissection can be decided. <b><i>Objectives:</i></b> The aim of this study was to validate three existing nomograms predicting 4 or more axillary lymph node metastases. <b><i>Method:</i></b> The risk for ≥4 lymph node metastases was calculated for n = 529 eligible breast cancer patients using the nomograms of Chagpar et al. [Ann Surg Oncol. 2007;14:670–7], Katz et al. [J Clin Oncol. 2008;26(13):2093–8], and Meretoja et al. [Breast Cancer Res Treat. 2013;138(3):817–27]. Discrimination and calibration were calculated for each nomogram to determine their validity. <b><i>Results:</i></b> In this cohort, the AUC values for the Chagpar, Katz, and Meretoja models were 0.79 (95% CI 0.74–0.83), 0.87 (95% CI 0.83–0.91), and 0.82 (95% CI 0.76–0.86), respectively, showing good discrimination between patients with and without high nodal burdens. <b><i>Conclusion:</i></b> This study presents support for the use of older breast cancer nomograms and confirms their current validity in an external population.
DOI: 10.6084/m9.figshare.20375968.v1
title: Additional file 2 of Pyruvate kinase, a metabolic sensor powering glycolysis, drives the metabolic control of DNA replication

description: Additional file 2: Tables S1-S4.
DOI: 10.6084/m9.figshare.21304593.v1
title: Identification of essential oil phytocompounds as natural inhibitors of Odorant-binding protein to prevent malaria through <i>in silico</i> approach

description: Malaria predominantly affects millions annually in the African and Asian tropical and subtropical countries. With no effective vaccine, malaria prevention is exclusively dependent on preventing human-vector interaction. <i>Anopheles gambiae</i>, the main vector of the malaria parasite <i>Plasmodium falciparum</i> contains Odorant Binding proteins (OBPs) which are considered an attractive drug target for anti-malarial therapy. To identify a potential anti-malarial compound, we performed a structure-based screening of 876 phytocompounds derived from essential oils against the OBP4 by molecular docking. The compounds having better docking scores were assessed for drug-likeness, toxicity, and molecular interaction analysis. As per the results, strong affinities and high stability were demonstrated by two phytocompounds viz. Alpha-cyperone (−8.1 kcal mol<sup>−1</sup>) and Humulene oxide (−8.1 kcal mol<sup>−1</sup>) with OBP4. The hydrophobic interactions involve Phe123, Ala106, Thr57, Ala52, Thr69, and Ile64 within the binding cavities, which may block the OBP4 receptor resulting in disorientation. After that, the potential compounds were subjected to molecular dynamics (MD) simulation to evaluate their structural stability and dynamics at the active site of OBP4. The MM-PBSA result revealed that Alpha-cyperone and Humulene oxide had binding free energy of −92.44 kJ mol<sup>−1</sup> and −113.25 kJ mol<sup>−1</sup>, respectively. Simulation outcomes demonstrate that these phytocompounds displayed considerable significant structural and pharmacological properties. The LD50 value of Alpha-cyperone and Humulene oxide also suggested that both are safe and suitable for use in natural repellent development. We suggest that the use of these compounds can minimize the treatment period and the various side effects associated with the currently available anti-malarial drugs. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.21313155.v1
title: Practical considerations to establish a validated platform for pooled detection of SARS-CoV-2 by droplet digital PCR

description: Minimal data set experiments
DOI: 10.6084/m9.figshare.24475141.v2
title: Genome sequence and annotation file of Chinese Eriocheir crab

description: To gain a deeper understanding of the genetic factors influencing the growth and development of Eriocheir sinensis, a well-known species of hairy crab found in Yangcheng Lake, this study focused on the de novo genome and full-length transcriptome information of the selected subjects. Specifically, Yangcheng Lake hairy crabs were chosen as the experimental samples. Initially, a genome analysis was performed, resulting in the identification of gene fragments with a combined length of 1266,092,319bp. Subsequently, a transcriptome analysis was conducted on a mixture of tissues from four different sites, namely muscle, brain, eye, and heart, to further investigate the genetic characteristics at the transcriptome level. The Pacific Biosciences (Pacio) single-molecule real-time sequencing system generated a total of 36.93G sub-fragments and 175,90041 effective inserts. This research contributes to the indirect comprehension of genetic variations underlying individual traits. Furthermore, a comparison of the obtained data with relevant literature emphasizes the advantages of this study and establishes a basis for further investigations on the Chinese mitten crab.
DOI: 10.6084/m9.figshare.27221235.v1
title: Homemaker output - Tamar

description: This is an example output of the Homemaker Evolutionary design software for review.The project consists of thrty-two houses.
DOI: 10.6084/m9.figshare.7523495.v2
title: Test data and the single line diagrams

description: Test data and the single line diagrams of the three cases in the paper.
DOI: 10.6084/m9.figshare.12363560.v3
title: Simulink Projects for Empirical Research

description: This dataset contains 1736 Matlab/Simulink models from 194 projects hosted on GitHub, MathWorks' Matlab Central and various other project hosting services. The dataset contains folders for the 194 projects with the model files in their original project structure. In addition to the model files, the corpus offers metadata for the models as well as, in an aggregated way, for the projects, provided as JSON files. It should be noted that two projects are not open-source and contain a license, which is why only the meta-data is provided for these.<br>
DOI: 10.6084/m9.figshare.12509948.v2
title: Data sheets for Ferguson et al. 2020, Tethys impact cratering

description: Each sheet is representative of the crater data used in our study of Ferguson et al. 2020, published in the Journal of Geophysical Research: Planets. The sheets are divided up by mapped region. This sheet also provides the areas used in the size-freqency diagram creation. Minor axis values were recorded for the elliptical craters. The ratio of the diameter to the minor axis yield the ellipticity of those craters.
DOI: 10.6084/m9.figshare.1608692.v1
title: Norovirus data all ages

description: Data extracted from systematic review on studies isolating norovirus from inpatients, outpatients and community studies.
DOI: 10.6084/m9.figshare.16616299.v1
title: Supplementary Material for: Limitations of SARC-F as a Screening Tool for Sarcopenia in Patients on Hemodialysis

description: <b><i>Introduction:</i></b> There are limited screening tools for sarcopenia in patients undergoing hemodialysis. This study aimed to investigate the reliability and validity of the SARC-F (Strength, Assistance in walking, Rise from a chair, Climb stairs, and Falls) questionnaire as a screening tool for sarcopenia (defined by the Asian Working Group for Sarcopenia [AWGS2019]) in patients undergoing hemodialysis. <b><i>Methods:</i></b> This cross-sectional study enrolled 179 patients (mean age: 66.5 ± 12 years, 58% men) undergoing maintenance hemodialysis 3 times per week at a hemodialysis center in Japan. The SARC-F score, handgrip strength, usual gait speed, sit-to-stand test time, short physical performance battery (SPPB), and appendicular skeletal muscle mass were evaluated. The reliability and validity of the SARC-F were analyzed using receiver-operating characteristic curve, area under the curve (AUC), and sensitivity/specificity analyses. <b><i>Results:</i></b> There were 49 (27.4%) patients with sarcopenia. Patients with SARC-F ≥4 (59 patients, 33.0%) had poorer grip strength, lower SPPB score, and slower gait speed than those with SARC-F &lt;4, while the skeletal muscle mass index did not differ significantly between the two groups. The sensitivity and specificity values of the SARC-F for identifying sarcopenia were 42.9% and 70.8%, respectively, while those for identifying severe sarcopenia were 66.7% and 72.3%, respectively. The AUCs of SARC-F were 0.57 for sarcopenia and 0.70 for severe sarcopenia. <b><i>Discussion/Conclusion:</i></b> The SARC-F alone is an inadequate screening tool for sarcopenia in patients undergoing hemodialysis. It should be used in combination with objective assessment measures, rather than as a first-step screening tool, to diagnose sarcopenia.
DOI: 10.6084/m9.figshare.28578947.v1
title: 深度创新人工智能

description: The DeepInnovationAI dataset consists of three primary CSV files: DeepPatentAI.csv (patent data), DeepDiveAI.csv (academic paper data), and DeepCosineAI.csv (containing calculated paper-patent similarity pairs).