cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.cm2kdc
title: Occurrence Download

description: A dataset containing 106113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Viscum album L.",
 "Year 2000-2023"
 ]
}

 The dataset includes 106113 records from 577 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008748-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.12754/data-2025-0002-01
title: Unravelling protist trophic complexity and prey-size dynamics in Central Baltic spring blooms

description: The trophic mode is one of the most important functional traits of organisms, determining their position in the food web and their role in the ecosystem. Under the classical concept, phytoplankton was considered to consist exclusively of phototrophic organisms and microzooplankton to consist exclusively of heterotrophic organisms. Contrastingly, communities considered as “phytoplankton” have been shown to include a variety of protist species combining both phototrophy and phagotrophy (mixotrophs) or even being non-photosynthetic. In extension, trophic diversity and relationships among plankton are expected to be more extensive and complex than previously thought.<br>Here we categorized the aquatic protist community present during spring bloom period in Bornholm Basin, central Baltic Sea, by trophic modes, and then analysed the temporal succession in community composition in terms of taxonomic groups and feeding mode, and its correlation with environmental factors and available prey-size. As one of the first studies, we deliver insights into the ciliate community composition of this area, and reveal more complex structural and functional dynamics within the protist community than previously recognized. Notably, the heterotrophic community in spring was characterized by a high diversity of species and groups besides ciliates.<br>The ciliate community showed clear seasonal succession in body size-classes, switching from the smallest size-fraction (10-20µm) in winter to medium and large-sized species with start of the spring period. Ciliates species composition showed further strong correlation to sea surface temperature, shifting from a cold-associated to a warm-associated community over the course of the spring season. Our results further lead to the suggestion that in communities including a larger mixotrophic component, size trait-based relations between phototrophic prey-size and dominance pattern of heterotrophic ciliates or dinoflagellates are less clear due to similar prey-size preferences among heterotrophic and mixotrophic species.<br>Our results emphasize the importance of accounting for the trophic modes of species to enhance the understanding of trophic relations and dynamics within bloom events.
description: Scientific purpose: The aim of the study was to analyse the protist community composition and its seasonal succession during spring bloom according to species trophic mode. Further we provide here one of the first data sets on ciliate community composition and biomass succession of Bornholm Basin.
description: Microscopic counting (phytoplankton, ciliates) according to HELCOM guidelines;dissolved inorganic nutrient analysis according to Grasshoff et al. (1999)
description: Environmental conditions (SST, salinity, dissolved inorganic nutrient concentration);Protist species/taxa/group biomass (µg C/L) separated into: phototrophic species, mixotrophic species, heterotrophic species
DOI: 10.15468/dl.tvubcu
title: Occurrence Download

description: A dataset containing 1684 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oxalis dillenii",
 "Continent is Europe",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 100",
 "Year is greater than or equal to 1970",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Material citation"
 ]
 }
 }
 ]
}

 The dataset includes 1684 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032315-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f5ep6c
title: Occurrence Download

description: A dataset containing 298 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cynodonichthys magdalenae",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 298 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032320-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xha3a7
title: Occurrence Download

description: A dataset containing 285 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Creagrutus guanes",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 285 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032318-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgj7pr
title: Occurrence Download

description: A dataset containing 293 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bunocephalus colombianus",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 293 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032319-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60686/t-fsd4032
title: FSD4032 Fertility Preferences: Global Data 1936-2023
DOI: 10.5281/zenodo.18714237
title: LINF_330032900

description: Golgi reassembly stacking protein (GRASP); Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.18714238
title: LINF_330032900

description: Golgi reassembly stacking protein (GRASP); Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.mg9u58
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is one of (Instituto de Botánica Darwinion, Vascular flora from the PUCV Herbarium, Museo Argentino de Ciencias Naturales \"Bernardino Rivadavia\" (MACN). Vascular Plants National Collection (BAv), Colección de Plantas Vasculares del Herbario CTES (CTES-DIG2020), NMNH Extant Specimen Records (USNM, US), Royal Botanic Gardens, Kew - Herbarium Specimens)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Perezia linearis"
 ]
}

 The dataset includes 35 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032321-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15869839
title: Biointegrity data viewer: global functional biosphere integrity maps and timelines from 1600 to 2014

description: Initial release of the biointegrity website code.
DOI: 10.5281/zenodo.15869840
title: Biointegrity data viewer: global functional biosphere integrity maps and timelines from 1600 to 2014

description: Initial release of the biointegrity website code.
DOI: 10.5281/zenodo.18609452
title: Revised AQUA EoS

description: Revised AQUA EoS
DOI: 10.5281/zenodo.18609451
title: Revised AQUA EoS

description: Revised AQUA EoS
DOI: 10.13140/rg.2.2.16030.80963
title: EndNotes
DOI: 10.15468/dl.md65nk
title: Occurrence Download

description: A dataset containing 3578 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Chaetoceros teres"
 ]
}

 The dataset includes 3578 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032322-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jprtnz
title: Occurrence Download

description: A dataset containing 300 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hyphessobrycon poecilioides",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 300 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032323-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18714121
title: markeR Shiny App Data

description: This dataset provides a comprehensive senescence compendium combining publicly available RNA-seq datasets, metadata, and curated gene sets for benchmarking and discovery of senescence-associated signatures.

The record contains:



counts.rds: Unprocessed RNA-seq data from the following public repositories:



E-MTAB-5403, E-MTAB-9714, GSE175533, GSE60340, GSE63577, GSE64553, GSE214410, GSE222400, GSE224070, GSE230181, GSE235768, GSE247831, GSE74324, GSE75643, GSE94928, GSE130727, GSE250224, GSE196724, GSE206677, GSE217718, GSE110268, GSE213323, E-MTAB-10969.



corrcounts.rds: Processed data, derived from the unprocessed datasets, filtered for lowly expressed genes, normalized, and batch-corrected, as described in the publication: https://www.biorxiv.org/content/10.64898/2025.12.05.692517 



metadata.rds: Associated metadata describing experimental conditions, sample information, and other relevant annotations.


SenescenceGeneSets.rds: Senescence gene sets included in the compendium:








Empirically derived gene sets: SAUL_SEN_MAYO, CSGene, CellAge, SeneQuest, HernandezSegura.



MSigDB gene sets: GOBP_CELLULAR_SENESCENCE, GOBP_NEGATIVE_REGULATION_OF_CELLULAR_SENESCENCE, GOBP_POSITIVE_REGULATION_OF_CELLULAR_SENESCENCE, REACTOME_CELLULAR_SENESCENCE.





 

Notes:





All data are derived from publicly available sources.




Users should cite both the original datasets and the markeR preprint when using this compendium.




This repository is specifically made available to support the development and demonstration of a Shiny application for markeR.
DOI: 10.5281/zenodo.18714122
title: markeR Shiny App Data

description: This dataset provides a comprehensive senescence compendium combining publicly available RNA-seq datasets, metadata, and curated gene sets for benchmarking and discovery of senescence-associated signatures.

The record contains:



counts.rds: Unprocessed RNA-seq data from the following public repositories:



E-MTAB-5403, E-MTAB-9714, GSE175533, GSE60340, GSE63577, GSE64553, GSE214410, GSE222400, GSE224070, GSE230181, GSE235768, GSE247831, GSE74324, GSE75643, GSE94928, GSE130727, GSE250224, GSE196724, GSE206677, GSE217718, GSE110268, GSE213323, E-MTAB-10969.



corrcounts.rds: Processed data, derived from the unprocessed datasets, filtered for lowly expressed genes, normalized, and batch-corrected, as described in the publication: https://www.biorxiv.org/content/10.64898/2025.12.05.692517 



metadata.rds: Associated metadata describing experimental conditions, sample information, and other relevant annotations.


SenescenceGeneSets.rds: Senescence gene sets included in the compendium:








Empirically derived gene sets: SAUL_SEN_MAYO, CSGene, CellAge, SeneQuest, HernandezSegura.



MSigDB gene sets: GOBP_CELLULAR_SENESCENCE, GOBP_NEGATIVE_REGULATION_OF_CELLULAR_SENESCENCE, GOBP_POSITIVE_REGULATION_OF_CELLULAR_SENESCENCE, REACTOME_CELLULAR_SENESCENCE.





 

Notes:





All data are derived from publicly available sources.




Users should cite both the original datasets and the markeR preprint when using this compendium.




This repository is specifically made available to support the development and demonstration of a Shiny application for markeR.
DOI: 10.15468/dl.p26ede
title: Occurrence Download

description: A dataset containing 87224 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Noctuidae",
 "Country is Austria",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 50",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 87224 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032278-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8uuabw
title: Occurrence Download

description: A dataset containing 311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saccodon dariensis",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 311 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032324-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8btktv
title: Occurrence Download

description: A dataset containing 317 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spatuloricaria gymnogaster",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 317 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032325-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18712882
title: Experimental Dataset: Heat Pump coupled to a Thermal Storage for charging a Carnot Battery

description: This experimental dataset comprises experiments conducted on a highly instrumented heat pump test bench for Carnot battery applications. The heat pump employs a laboratory-scale reciprocating compressor and is coupled to a two-tank sensible thermal energy storage.

The reported data include temperatures and pressures between all main components, as well as flow rates of all fluids and electrical power consumption. This enables a detailed analysis of individual heat pump components and supports model fitting and validation, for example for a compressor model, which is also included. The dataset provides raw sensor signals as time series, time-averaged values, and calculated performance metrics (e.g., COP, compressor efficiencies, and exergy losses). Descriptive metadata are included to facilitate understanding of the experimental setup and the applied boundary conditions. A total of 17 experiments are included, covering different stationary operating conditions with varying storage temperatures, compressor frequencies and working fluids (propane, butane, and a zeotropic propane/pentane mixture). 

The dataset is published as a preprint at https://doi.org/10.36227/techrxiv.176478421.10869135/v1 (accepted at 15th IEA Heat Pump Conference), where the data are described and analysed in detail. All data presented in the publication are included in this repository.

The dataset is explained in detail in the file README_overview.md. Please read this first.
DOI: 10.5281/zenodo.18712881
title: Experimental Dataset: Heat Pump coupled to a Thermal Storage for charging a Carnot Battery

description: This experimental dataset comprises experiments conducted on a highly instrumented heat pump test bench for Carnot battery applications. The heat pump employs a laboratory-scale reciprocating compressor and is coupled to a two-tank sensible thermal energy storage.

The reported data include temperatures and pressures between all main components, as well as flow rates of all fluids and electrical power consumption. This enables a detailed analysis of individual heat pump components and supports model fitting and validation, for example for a compressor model, which is also included. The dataset provides raw sensor signals as time series, time-averaged values, and calculated performance metrics (e.g., COP, compressor efficiencies, and exergy losses). Descriptive metadata are included to facilitate understanding of the experimental setup and the applied boundary conditions. A total of 17 experiments are included, covering different stationary operating conditions with varying storage temperatures, compressor frequencies and working fluids (propane, butane, and a zeotropic propane/pentane mixture). 

The dataset is published as a preprint at https://doi.org/10.36227/techrxiv.176478421.10869135/v1 (accepted at 15th IEA Heat Pump Conference), where the data are described and analysed in detail. All data presented in the publication are included in this repository.

The dataset is explained in detail in the file README_overview.md. Please read this first.
DOI: 10.15468/dl.tujdpq
title: Occurrence Download

description: A dataset containing 322 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nycticebus bengalensis"
 ]
}

 The dataset includes 322 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032329-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3w65z
title: Occurrence Download

description: A dataset containing 16911 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Papaver dubium",
 "Continent is Europe",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 100",
 "Year is greater than or equal to 1970",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Material citation"
 ]
 }
 }
 ]
}

 The dataset includes 16911 records from 167 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032326-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18714284
title: Stay or Not To Stay
DOI: 10.5281/zenodo.18714283
title: Stay or Not To Stay
DOI: 10.5281/zenodo.18714260
title: INGLIZ TILINI O'QITISH VA O'RGANISHDA ZAMONAVIY TEXNOLOGIYALARDAN FOYDALANISH

description: Zamonaviy texnologiyalarning integratsiyasi til ta'limi manzarasini, xususan, ingliz tilini ikkinchi yoki chet tili sifatida o'qitish va o'rganishni o'zgartirdi. Ushbu ilmiy maqola raqamli asrda o'quvchilarning turli ehtiyojlarini qondirish uchun ingliz tilini o'qitishni yaxshilash uchun texnologiyadan foydalanishning innovatsion usullarini o'rganadi. Til o‘rgatishda virtual reallik, sun’iy intellekt, mobil ilovalar va onlayn platformalar kabi zamonaviy texnologiyalarni joriy etishning afzalliklari, muammolari va oqibatlarini o‘rganib chiqqan holda, ushbu maqola til o‘rganish natijalarini optimallashtirishda texnologiyaning transformatsion salohiyatiga oydinlik kiritadi. Ingliz tilini o'qitishda interfaol ta'lim, shaxsiylashtirilgan ta'lim va global muloqotni rivojlantirishda texnologiyaning rolini har tomonlama tahlil qilish orqali o'qituvchilar butun dunyo bo'ylab talabalar uchun qiziqarli va samarali o'quv muhitini yaratish uchun zamonaviy texnologiyalarning kuchidan foydalanishlari mumkin.
DOI: 10.5281/zenodo.18714261
title: INGLIZ TILINI O'QITISH VA O'RGANISHDA ZAMONAVIY TEXNOLOGIYALARDAN FOYDALANISH

description: Zamonaviy texnologiyalarning integratsiyasi til ta'limi manzarasini, xususan, ingliz tilini ikkinchi yoki chet tili sifatida o'qitish va o'rganishni o'zgartirdi. Ushbu ilmiy maqola raqamli asrda o'quvchilarning turli ehtiyojlarini qondirish uchun ingliz tilini o'qitishni yaxshilash uchun texnologiyadan foydalanishning innovatsion usullarini o'rganadi. Til o‘rgatishda virtual reallik, sun’iy intellekt, mobil ilovalar va onlayn platformalar kabi zamonaviy texnologiyalarni joriy etishning afzalliklari, muammolari va oqibatlarini o‘rganib chiqqan holda, ushbu maqola til o‘rganish natijalarini optimallashtirishda texnologiyaning transformatsion salohiyatiga oydinlik kiritadi. Ingliz tilini o'qitishda interfaol ta'lim, shaxsiylashtirilgan ta'lim va global muloqotni rivojlantirishda texnologiyaning rolini har tomonlama tahlil qilish orqali o'qituvchilar butun dunyo bo'ylab talabalar uchun qiziqarli va samarali o'quv muhitini yaratish uchun zamonaviy texnologiyalarning kuchidan foydalanishlari mumkin.
DOI: 10.15468/dl.ps82uf
title: Occurrence Download

description: A dataset containing 50415 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Manihot esculenta"
 ]
}

 The dataset includes 50415 records from 506 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032273-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q8x78x
title: Occurrence Download

description: A dataset containing 42525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Papaver rhoeas",
 "Continent is Europe",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 100",
 "Year is greater than or equal to 1970",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Material citation"
 ]
 }
 }
 ]
}

 The dataset includes 42525 records from 290 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032327-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gsdeuj
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-48.86931 -28.20135,-48.55486 -28.20135,-48.55486 -27.72226,-48.86931 -27.72226,-48.86931 -28.20135))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 108 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032331-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.