cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10694998
title: Data from: Predicting global organic-matter decomposition in flowing waters

description: Rivers and streams contribute to the global carbon cycle by decomposing vast quantities of organic matter, but decomposition rates are highly heterogenous, and our understanding of large-scale patterns and drivers of this process remains limited. Using fine-scale climate, land-use, and water-quality data, we generated a predictive model that explains most (81%) of the variation in cellulose-decomposition rates across 514 streams spanning 135° of latitude. Our model reveals key environmental controls of decomposition, including geologic, climatic, and, importantly, anthropogenic attributes. Projections of cellulose decomposition, when combined with genus-level litter-quality attributes, predict leaf-litter-decomposition rates accurately at the global scale (70% of variance explained). High-resolution predictions of cellulose and natural-leaf-litter decomposition provide novel insight into carbon cycling in flowing waters worldwide, including vast, unstudied areas of Earth.

v1.0 first data release includes all code for models, analyses, and figures.

v1.1 addition of code for a new supplemental figure (Figure S2)
DOI: 10.5281/zenodo.14166067
title: Resmo Data

description: Striped bass data from a tracking study in Plum Island, MA 2015. The data is from 26 receivers that were deployed in Plum Island. This data set includes total residence/number of fish with standard error and total number of movements/number of fish with standard error.
DOI: 10.5281/zenodo.14166068
title: Resmo Data

description: Striped bass data from a tracking study in Plum Island, MA 2015. The data is from 26 receivers that were deployed in Plum Island. This data set includes total residence/number of fish with standard error and total number of movements/number of fish with standard error.
DOI: 10.15468/dl.8e6hwn
title: Occurrence Download

description: A dataset containing 628026 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Specimen, Occurrence evidence)",
 "Country is one of (United States of America, Canada, Mexico)",
 "OccurrenceStatus is Present",
 "TaxonKey is Danaus plexippus (Linnaeus, 1758)",
 "Year 1984-2024"
 ]
}

 The dataset includes 628026 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015281-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffam9m
title: Occurrence Download

description: A dataset containing 523 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "GadmGid is BRA.14_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Athene cunicularia (Molina, 1782)"
 ]
}

 The dataset includes 523 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015411-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjb44z
title: Occurrence Download

description: A dataset containing 249106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "SpeciesKey is Sturnella neglecta Audubon, 1844",
 "HasCoordinate is TRUE",
 "Year is 2023"
 ]
}

 The dataset includes 249106 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015370-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14102292
title: MCSPACE dataset inference analysis

description: MCSPACE inference analysis files and source code for paper. This archive contains main code and scripts to regenerate the analysis in the main paper in the file "    mcspace_source_code_and_paper_scripts.tar.gz". The file "mcspace_analysis_output.tar.gz" contains intermediate output files for:



Analysis of main datasets in paper

Synthetic benchmarking analysis model outputs

Cross validation analysis model outputs


For full project/source pipeline, refer to https://github.com/gerberlab/MCSPACE/tree/main/mcspace/MCSPACE_paper.
DOI: 10.5281/zenodo.14102293
title: MCSPACE dataset inference analysis

description: MCSPACE inference analysis files. This archive contains intermediate output files for:



Analysis of main datasets in paper

Synthetic benchmarking analysis model outputs (except for the GMM model, which is in another record due to zenodo size limitations)

Cross validation analysis model outputs (except for the GMM model, which is in another record due to zenodo size limitations)


For full project/source pipeline, refer to https://github.com/gerberlab/MCSPACE/tree/main/mcspace/MCSPACE_paper.
DOI: 10.5281/zenodo.14166041
title: MCSPACE dataset inference analysis

description: MCSPACE inference analysis files and source code for paper. This archive contains main code and scripts to regenerate the analysis in the main paper in the file "    mcspace_source_code_and_paper_scripts.tar.gz". The file "mcspace_analysis_output.tar.gz" contains intermediate output files for:



Analysis of main datasets in paper

Synthetic benchmarking analysis model outputs

Cross validation analysis model outputs


For full project/source pipeline, refer to https://github.com/gerberlab/MCSPACE/tree/main/mcspace/MCSPACE_paper.
DOI: 10.15468/dl.9h97wp
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tremarctos ornatus (F.G.Cuvier, 1825)",
 "Year 2024-2024"
 ]
}

 The dataset includes 66 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015413-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n84k9u
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tremarctos ornatus (F.G.Cuvier, 1825)",
 "Year 2024-2024"
 ]
}

 The dataset includes 66 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015412-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27740475
title: Brain monoamine changes modulate the corticotropin-releasing hormone receptor 1-mediated behavioural response to acute thermal stress in zebrafish larvae

description: Role of Corticotropin-releasing hormone receptor 1 in temperature sensing in zebrafish
DOI: 10.6084/m9.figshare.27740475.v1
title: Brain monoamine changes modulate the corticotropin-releasing hormone receptor 1-mediated behavioural response to acute thermal stress in zebrafish larvae

description: Role of Corticotropin-releasing hormone receptor 1 in temperature sensing in zebrafish
DOI: 10.15468/dl.7p8ruv
title: Occurrence Download

description: A dataset containing 52889 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Bolivia (Plurinational State of)",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 52889 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015414-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14166146
title: Raw data for TrackMate tracking output and R script for data analysis
DOI: 10.5281/zenodo.14166147
title: Raw data for TrackMate tracking output and R script for data analysis
DOI: 10.15468/dl.yd9452
title: Occurrence Download

description: A dataset listing the 341 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "GadmGid is one of (COL.28.9_2)",
 "StateProvince ~santander",
 "Geometry POLYGON((-73.10775 7.10445,-73.10695 7.10556,-73.10575 7.11372,-73.10855 7.1086,-73.10884 7.10459,-73.10775 7.10445))"
 ]
 }
 ]
}

 The dataset's 341 records were derived from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015387-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3u87y
title: Occurrence Download

description: A dataset containing 249106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "SpeciesKey is Sturnella neglecta Audubon, 1844",
 "HasCoordinate is TRUE",
 "Year is 2023"
 ]
}

 The dataset includes 249106 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015375-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9cee5t
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tremarctos ornatus (F.G.Cuvier, 1825)",
 "Year 2024-2024"
 ]
}

 The dataset includes 66 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015417-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e6mkep
title: Occurrence Download

description: A dataset containing 363582 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Monarch Watch"
 ]
}

 The dataset includes 363582 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015377-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8cdj87
title: Occurrence Download

description: A dataset containing 4622 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is Grus americana (Linnaeus, 1758)",
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "Year is 2023"
 ]
}

 The dataset includes 4622 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015415-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wjw4n6
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psychotria siphonophora Urb."
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015418-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wu8av3
title: Occurrence Download

description: A dataset containing 4841 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pinus albicaulis Engelm.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4841 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015421-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9bsj5q
title: Occurrence Download

description: A dataset containing 4797 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-70.34196 -23.03127, -70.34908 -23.03317, -70.38751 -23.07336, -70.41805 -23.09157, -70.45309 -23.09871, -70.47807 -23.09955, -70.47966 -23.10451, -70.43212 -23.25849, -70.32831 -23.34187, -70.24956 -23.48185, -70.10857 -23.5796, -70.04048 -23.55163, -69.95038 -23.46121, -69.91282 -23.37897, -69.90893 -23.25955, -69.89912 -23.17429, -69.95435 -23.15406, -70.04347 -23.14639, -70.04479 -23.11794, -70.09371 -23.08491, -70.16131 -23.08229, -70.19509 -23.07848, -70.24516 -23.09232, -70.27917 -23.0517, -70.34196 -23.03127))"
 ]
}

 The dataset includes 4797 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015422-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6uvymr
title: Occurrence Download

description: A dataset containing 679 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pieris taiwanensis Hayata"
 ]
}

 The dataset includes 679 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015416-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b598xf
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rondeletia amplexicaulis Urb."
 ]
}

 The dataset includes 14 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015423-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vufnmw
title: Occurrence Download

description: A dataset containing 249106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "SpeciesKey is Sturnella neglecta Audubon, 1844",
 "HasCoordinate is TRUE",
 "Year is 2023"
 ]
}

 The dataset includes 249106 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015376-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tc6dzd
title: Occurrence Download

description: A dataset containing 433 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Tinamotis pentlandii Vigors, 1837"
 ]
}

 The dataset includes 433 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015424-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vuj282
title: Occurrence Download

description: A dataset containing 8355 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Acinonyx jubatus (Schreber, 1775)"
 ]
}

 The dataset includes 8355 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015431-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzfdzv
title: Occurrence Download

description: A dataset containing 1601 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Asthenes pudibunda (P.L.Sclater, 1874)"
 ]
}

 The dataset includes 1601 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015425-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nep5pt
title: Occurrence Download

description: A dataset containing 720 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trichopodus trichopterus (Pallas, 1770))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 720 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015433-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pajfse
title: Occurrence Download

description: A dataset containing 1464 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1998-2019",
 "HasCoordinate is true",
 "TaxonKey is Spizaetus isidori (Des Murs, 1845)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1464 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008083-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6h6jk5
title: Occurrence Download

description: A dataset containing 331 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pseudopaludicola mystacalis (Cope, 1887)"
 ]
}

 The dataset includes 331 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065743-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0ury2c
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hydrochoerus hydrochoeris (Linnaeus, 1766)"
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008190-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x9mudu
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xanthomixis tenebrosa (Stresemann, 1925)"
 ]
}

 The dataset includes 17 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081012-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8pdt8
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dennstaedtia appendiculata (Wall. ex Hook.) J.Sm."
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053180-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.l3mavl
title: Occurrence Download

description: A dataset containing 156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is SOVIET ANTARCTIC EXPEDITIONS for Zooplankton (R.V. OB March-May 1956, January-March 1957;R.V.ACADEMIC KURCHATOV, October 1971-January 1972; RV DMITRY MENDELEEV;R.V.ACADEMIC IOFFE 1992)."
 ]
}

 The dataset includes 156 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008190-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kfaeft
title: Occurrence Download

description: A dataset containing 141 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Importancia del Parque Estatal Cerro de la Tortuga para la conservación de los mamíferos del estado de Morelos, México"
 ]
}

 The dataset includes 141 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065750-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqhus5
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Crepidomanes kurzii (Bedd.) Tagawa & K.Iwats."
 ]
}

 The dataset includes 99 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053179-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kmvvmp
title: Occurrence Download

description: A dataset containing 465 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fish catch from 1996/97 Voyage 1 WASTE (WOCE Antarctic Southern Transect Expedition)"
 ]
}

 The dataset includes 465 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008190-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8bqgg4
title: Occurrence Download

description: A dataset containing 98096 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-10.74 34.26,44.24 34.26,44.24 71.24,-10.74 71.24,-10.74 34.26))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Polypodium vulgare L.",
 "Year 2000-2020"
 ]
}

 The dataset includes 98096 records from 356 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021047-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/vd6sj4k6dj.1
title: Predictors of Mortality Among Hemodialysis Patients at Al-Thora General Hospital, Ibb Governate, Yemen: A Retrospective Study

description: A retrospective study involving 4194 HD patients in the Nephrology Center of Al-Thora General Hospital, Ibb Governate, Yemen between March 2017 and January 2024. The data on demographic characteristics, risk factors, and comorbidities of HD patients were gathered and analyzed. The Kaplan-Meier test and the log-rank test were used to evaluate and compare survival curves and the proportional Cox hazard model was used to investigate the factors associated with mortality.
DOI: 10.15468/dl.bicl0e
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Simaba trichilioides A.St.-Hil.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 51 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008084-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.