cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.31134634.v2
title: <b>Hierarchical drivers of soil bacterial assembly and functions across European vineyards: climate dominates, management modulates</b>

description: Soil bacteria underpin essential ecosystem functions, including nutrient cycling and carbon storage, yet how broad-scale environmental drivers interact with agricultural practices in shaping community assembly remains poorly understood. Here, we investigated how climate, landscape context, soil nutrient stoichiometry and vineyard management interact to shape soil bacterial diversity, predicted functional potential, and interaction networks across major European biogeographic regions. Paired organic and conventional vineyards were sampled in Mediterranean (Spain), oceanic (France), and temperate continental (Austria) climatic zones. Macroclimate, mostly determined by temperature and precipitation gradients, emerged as the dominant filter of bacterial alpha and beta diversity and interaction networks. Additional filters, albeit to a lesser extent, were the surrounding landscape composition (proportion of agricultural vs semi-natural habitats) and soil nutrients (CNP). Despite substantial taxonomic turnover among regions, overall functional capacity remained stable, underscoring strong redundancy across biogeochemical pathways along the climatic gradient. Management exerted secondary, carbon- and nitrogen-cycle function-specific effects. In organic fields, resource-dependent traits such as hydrolytic enzymes and nitrogen fixation were tightly coupled with local nutrient heterogeneity, indicating flexible adjustment to on-site resource pools. Conversely, in conventional fields, carbon‐fixation and oxidoreductases varied primarily with climate and landscape context, suggesting that external inputs decoupled microbes from native stoichiometry and reinforce deterministic, climate-linked assembly. Nitrogen-cycling traits followed similar patterns, with processes like nitrification and denitrification responding more strongly to climatic and spatial gradients. These findings advance a hierarchical model of microbial assembly, where climate and landscape determine the primary constraint, whereas management modulates local processes.
DOI: 10.6084/m9.figshare.31134634.v1
title: <b>Hierarchical drivers of soil bacterial assembly and function</b><b>s</b><b> across European vineyards: climate dominates, management modulates</b>

description: Soil bacteria underpin essential ecosystem functions, including nutrient cycling and carbon storage, yet how broad-scale environmental drivers interact with agricultural practices in shaping community assembly remains poorly understood. Here, we investigated how climate, landscape context, soil nutrient stoichiometry and vineyard management interact to shape soil bacterial diversity, predicted functional potential, and interaction networks across major European biogeographic regions. Paired organic and conventional vineyards were sampled in Mediterranean (Spain), oceanic (France), and temperate continental (Austria) climatic zones. Macroclimate, mostly determined by temperature and precipitation gradients, emerged as the dominant filter of bacterial alpha and beta diversity and interaction networks. Additional filters, albeit to a lesser extent, were the surrounding landscape composition (proportion of agricultural vs semi-natural habitats) and soil nutrients (CNP). Despite substantial taxonomic turnover among regions, overall functional capacity remained stable, underscoring strong redundancy across biogeochemical pathways along the climatic gradient. Management exerted secondary, carbon- and nitrogen-cycle function-specific effects. In organic fields, resource-dependent traits such as hydrolytic enzymes and nitrogen fixation were tightly coupled with local nutrient heterogeneity, indicating flexible adjustment to on-site resource pools. Conversely, in conventional fields, carbon‐fixation and oxidoreductases varied primarily with climate and landscape context, suggesting that external inputs decoupled microbes from native stoichiometry and reinforce deterministic, climate-linked assembly. Nitrogen-cycling traits followed similar patterns, with processes like nitrification and denitrification responding more strongly to climatic and spatial gradients. These findings advance a hierarchical model of microbial assembly, where climate and landscape determine the primary constraint, whereas management modulates local processes.
DOI: 10.71782/data/kklhgy
title: Quantitative dataset: Survey data obtained in the project (WP2) on the formal and non-formal educational environment as an institutional framework for civic participation (including decision-making, trust).

description: The survey was conducted within the project “Preconditions of Authentic Youth Participation in Formal and Non-Formal Education” (UNFRAMED) (No. VPP-IZM-Izglītība-2023/6-0002), which is funded by the Ministry of Education and Science of the Republic of Latvia under the State Research Programme “Education” (2023–2026). The State Research Programme is administered by the Latvian Council of Science. The data collection method is a quantitative online survey among representatives of student self-governments in educational institutions (pupils and students) and youth councils at the municipalities.
description: Target group: Young people aged 13–25 who are active in pupil and student self-governments and in municipal youth councils.

Sampling method: Purposive sampling was used, including young people who are actively involved in participation structures - pupil and student self-governments as well as municipal youth councils. This type of sampling was chosen to gain an in-depth understanding of young people’s participation experiences and motivations, which could not be adequately captured using only a randomly selected group of respondents. The results allow for a comparison between the perspectives of actively engaged youth and those of the general youth population regarding participation processes.

Number of respondents: 242

Note: Incomplete questionnaires were also included in the data analysis; therefore, the base number of respondents in the data tables varies.
description: Data is available under restricted access. Access to the restricted files may be granted upon request by contacting the dataset contact person.
DOI: 10.15468/dl.hxw2as
title: Occurrence Download

description: A dataset containing 234 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "Geometry POLYGON((-74.09313 6.65639,-74.09313 6.65446,-74.09345 6.6524,-74.09209 6.64229,-74.09209 6.62987,-74.04232 6.63039,-74.04252 6.65594,-74.09313 6.65639))"
 ]
}

 The dataset includes 234 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000787-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18002236
title: X-Ray Diffraction of Collagen-Structured Water Molecules for Cancer Detection
DOI: 10.5281/zenodo.18421777
title: X-Ray Diffraction of Collagen-Structured Water Molecules for Cancer Detection
DOI: 10.34740/kaggle/dsv/14668427
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.18422010
title: CTDO and biogeochemical dataset

description: Attached is a database that includes profiles of water temperature, salinity, dissolved oxygen, fluorescence, and turbidity from the surface to the bottom. Also included is an analysis of biogeochemical variables obtained from water samples collected with a Niskin bottle.
DOI: 10.5281/zenodo.18422011
title: CTDO and biogeochemical dataset

description: Attached is a database that includes profiles of water temperature, salinity, dissolved oxygen, fluorescence, and turbidity from the surface to the bottom. Also included is an analysis of biogeochemical variables obtained from water samples collected with a Niskin bottle.
DOI: 10.5281/zenodo.18422372
title: ProVerif Framework for Internet Voting (Draft)
DOI: 10.5281/zenodo.18422373
title: ProVerif Framework for Internet Voting (Draft)
DOI: 10.15468/dl.xudtx2
title: Occurrence Download

description: A dataset containing 11816 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-84.26299 35.05867,-83.6821 34.69343,-82.30895 34.4524,-80.49362 37.22261,-81.52742 37.33747,-82.86576 37.15004,-84.17146 35.66486,-84.26299 35.05867))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plethodon jordani"
 ]
}

 The dataset includes 11816 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000788-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.erqvmb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Colletotrichum gloeosporioides",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000789-260129131611470/datasets/export for details.
DOI: 10.5281/zenodo.18391578
title: Automated Type-IV Clone Generation via LLMs and Deterministic Validation (replication package)

description: KaminoDatasetGenerator.zip - contains the replication package for the empirical evaluation. Make sure to read the Readme.md inside the root folder for instructions. 



The experiment results are in /results

The pilot study results are inside /results/pilot study

The results of exploring the top 50 configurations are inside /results/using top 50 configs


Prompts  - prompts are inside /pipeline/src/utils/prompts.py

Refactorings.pdf - contains a description, with examples, of the seven refactorings used as part of the prompts

Hyperparameters - these are inside /pipeline/src/config.py

kamino_clones_dataset.zip - the final dataset, split into training and testing
DOI: 10.5281/zenodo.18391579
title: Automated Type-IV Clone Generation via LLMs and Deterministic Validation (replication package)

description: KaminoDatasetGenerator.zip - contains the replication package for the empirical evaluation. Make sure to read the Readme.md inside the root folder for instructions. 



The experiment results are in /results

The pilot study results are inside /results/pilot study

The results of exploring the top 50 configurations are inside /results/using top 50 configs


Prompts  - prompts are inside /pipeline/src/utils/prompts.py

Refactorings.pdf - contains a description, with examples, of the seven refactorings used as part of the prompts

Hyperparameters - these are inside /pipeline/src/config.py

kamino_clones_dataset.zip - the final dataset, split into training and testing
DOI: 10.15468/dl.esx2ve
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is DEU.8_1",
 "TaxonKey is Calliptamus italicus"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000791-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.av5psw
title: Occurrence Download

description: A dataset listing the 146962 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "Year 2020-2026"
 ]
}

 The dataset's 146962 records were derived from 1181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000810-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7sx4g9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Xenodermichthys copei (Gill, 1884)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((8.9648 19.8496,-0.0352 19.8496,-0.0352 10.8496,8.9648 10.8496,8.9648 19.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010491-250525065834625/datasets/export for details.
DOI: 10.15468/dl.nfesn3
title: Occurrence Download

description: A dataset containing 83950 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Polypedilum Kieffer, 1912"
 ]
}

 The dataset includes 83950 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010481-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15571712
title: Data associated with publication Klapste et al. (2025) Using genomics to trace genealogy in the early stages of forest tree domestication. Genetic Resources and Crop Evolution

description: The file contains all phenotypic, pedigree and genomic data associated to publication Klapste et al. (2025) Using genomics to trace genealogy in the early stages of forest tree domestication published in Genetic Resources and Crop Evolution journal
DOI: 10.5281/zenodo.15571713
title: Data associated with publication Klapste et al. (2025) Using genomics to trace genealogy in the early stages of forest tree domestication. Genetic Resources and Crop Evolution

description: The file contains all phenotypic, pedigree and genomic data associated to publication Klapste et al. (2025) Using genomics to trace genealogy in the early stages of forest tree domestication published in Genetic Resources and Crop Evolution journal
DOI: 10.15468/dl.dacqr7
title: Occurrence Download

description: A dataset containing 2382 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Combretaceae"
 ]
}

 The dataset includes 2382 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014545-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xsrwct
title: Occurrence Download

description: A dataset containing 149181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ondatra zibethicus (Linnaeus, 1766)",
 "DatasetKey is one of (VMM - Rat control occurrences in Flanders, Belgium, Muskrat captures in Flanders, Belgium, MICA - Muskrat occurrences collected by RATO in East Flanders, Belgium, MICA - Muskrat occurrences collected by VMM in Flanders, Belgium, RATO - daily operations commissioned by the province East Flanders, Belgium)"
 ]
}

 The dataset includes 149181 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014544-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15571751
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250602a Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250602a Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.15571752
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250602a Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250602a Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.15468/dl.4cukas
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Specimen)",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Strabomantis anomalus (Boulenger, 1898)"
 ]
}

 The dataset includes 132 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014546-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2256np
title: Occurrence Download

description: A dataset containing 2955279444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2955279444 records from 63059 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014512-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3pf6vv
title: Occurrence Download

description: A dataset containing 47339 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Perca fluviatilis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2020",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 47339 records from 234 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000199-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18417421
title: Paleo-Saltwater Dominates Coastal Aquifer Salinization: A Continental-Scale Study in China
DOI: 10.6073/pasta/66aea7168620c64bc128565ca7967bac
title: Dissolved inorganic nutrients including 5 macro nutrients: silicate, phosphate, nitrate, nitrite, and ammonium from water column bottle samples collected between October and April at Palmer Station, 1991 - 2025.

description: The inorganic plant macronutrients dissolved phosphate, silicate, nitrate, nitrite and ammonium are the major sources of nutrition for phytoplankton growth in seawater (with sunlight and inorganic carbon). Macronutrient distributions reflect the large-scale circulation patterns in the oceans and are useful properties to delineate water masses. Dissolved inorganic nutrients samples are typically collected in every Niskin bottle sample collected at and near Palmer Station, Anvers Island, Antarctica on the Western Antarctic Peninsula. Water samples are collected throughout the water column at stations within the Palmer LTER region (primarily B and E, to 50m and 65m respectively). Beginning in the 2020-2021 season, Station B is no longer sampled. In Antarctic waters, dissolved inorganic macronutrients are seldom depleted to limiting concentrations except during heavy prolonged phytoplankton blooms. This is due to the fact that phytoplankton growth is more often limited by light or iron, and to the short growing season. Water samples are analyzed for dissolved nutrients with recognized standard oceanographic protocols for nutrient autoanalyzers (continuous flow analyzers).
DOI: 10.5281/zenodo.18417420
title: Paleo-Saltwater Dominates Coastal Aquifer Salinization: A Continental-Scale Study in China
DOI: 10.15468/dl.kkafx7
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hemistylus macrostachya",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000201-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18417371
title: MILK PRODUCTIVITY OF MONTBÉLIARDE COWS IN THE THIRD AND HIGHER LACTATIONS UNDER DIFFERENT FEEDING CONDITIONS

description: The article presents the milk productivity of Montbéliarde cows fed under different feeding conditions. It was found that Montbéliarde cows in the third and higher lactations fed with mixed rations produced 423.3 kg (7.75%) more milk during the lactation period compared to their counterparts fed under farm conditions. In addition, milk fat yield was higher by 14.9 kg (6.68%), milk protein yield by 12.6 kg (6.28%), and the amount of 4% fat-corrected milk by 373.4 kg (6.7%).

The milk yield coefficient of cows fed with mixed rations was 982.6 kg, and the milk yield coefficient relative to 4% fat-corrected milk was 992.4 kg, which exceeded the values of cows fed under farm conditions by 46.8 kg (P > 0.999) and 38.0 kg (P > 0.999), respectively. In the experimental group, the yields of milk fat and protein calculated per 4% fat-corrected milk were higher than those of the control group by 1.2 kg (3.4%) and 1.1 kg (3.2%), respectively.

Montbéliarde cows fed with mixed rations required an average of 0.88 feed units to produce 1 kg of natural-fat milk, which was 0.07 feed units less than that required by their counterparts fed under farm conditions.
DOI: 10.5281/zenodo.18417370
title: MILK PRODUCTIVITY OF MONTBÉLIARDE COWS IN THE THIRD AND HIGHER LACTATIONS UNDER DIFFERENT FEEDING CONDITIONS

description: The article presents the milk productivity of Montbéliarde cows fed under different feeding conditions. It was found that Montbéliarde cows in the third and higher lactations fed with mixed rations produced 423.3 kg (7.75%) more milk during the lactation period compared to their counterparts fed under farm conditions. In addition, milk fat yield was higher by 14.9 kg (6.68%), milk protein yield by 12.6 kg (6.28%), and the amount of 4% fat-corrected milk by 373.4 kg (6.7%).

The milk yield coefficient of cows fed with mixed rations was 982.6 kg, and the milk yield coefficient relative to 4% fat-corrected milk was 992.4 kg, which exceeded the values of cows fed under farm conditions by 46.8 kg (P > 0.999) and 38.0 kg (P > 0.999), respectively. In the experimental group, the yields of milk fat and protein calculated per 4% fat-corrected milk were higher than those of the control group by 1.2 kg (3.4%) and 1.1 kg (3.2%), respectively.

Montbéliarde cows fed with mixed rations required an average of 0.88 feed units to produce 1 kg of natural-fat milk, which was 0.07 feed units less than that required by their counterparts fed under farm conditions.
DOI: 10.5281/zenodo.18417413
title: Supplemental Data - On-Filter Derivatization and Alkaline Trap Sampling for UAV-Based Gas-Phase Halogen Speciation in Volcanic Plumes
DOI: 10.5281/zenodo.18417414
title: Supplemental Data - On-Filter Derivatization and Alkaline Trap Sampling for UAV-Based Gas-Phase Halogen Speciation in Volcanic Plumes