cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/9j9425mxgx.1
title: Comprehensive milk peptide profiling in regards to animal species and processing conditions

description: The data files uploaded show HR-MS data and the resulting PEAKS data html files of milk samples from different animal origin and processing, upon which a peptide profiling was based. Comparison of the peptides identified in the different mammalian species led to the determination of species-specific marker peptides. Furthermore, data evaluation was conducted in regards to the heat treatment to which the samples were subjected (ESL, extended shelf life; P, pasteurization; UHT, ultra-high temperature).
DOI: 10.17632/9j9425mxgx.2
title: Comprehensive milk peptide profiling in regards to animal species and processing conditions

description: The data files uploaded show HR-MS data and the resulting PEAKS data html files of milk samples from different animal origin and processing, upon which a peptide profiling was based. Comparison of the peptides identified in the different mammalian species led to the determination of species-specific marker peptides. Furthermore, data evaluation was conducted in regards to the heat treatment to which the samples were subjected (ESL, extended shelf life; P, pasteurization; UHT, ultra-high temperature).
DOI: 10.17632/wxcbms43gc.1
title: Topographic survey of Santa Marta's campus of UCC

description: Topography data from Santa Marta's campus of UCC was collected by using the metric and compass method which consists of inserting stakes at each point and measuring the tape on the sides of the terrain (several times the same edge, to take an average of the same distance that you want to know). The compass was also used to estimate the horizontal angle of the distance from the north is known.
DOI: 10.15468/w4jmmp
title: Seawater carbonate chemistry, growth rate and Emiliania huxleyi (strain AC481) biological processes during experiments, 2010

description: The impact of ocean acidification and increased water temperature on marine ecosystems, in particular those involving calcifying organisms, has been gradually recognised. We examined the individual and combined effects of increased pCO2 (180 ppmV CO2, 380 ppmV CO2 and 750 ppmV CO2 corresponding to past, present and future CO2 conditions, respectively) and temperature (13 °C and 18 °C) during the exponential growth phase of the coccolithophore E. huxleyi using batch culture experiments. We showed that cellular production rate of Particulate Organic Carbon (POC) increased from the present to the future CO2 treatments at 13 °C. A significant effect of pCO2 and of temperature on calcification was found, manifesting itself in a lower cellular production rate of Particulate Inorganic Carbon (PIC) as well as a lower PIC:POC ratio at future CO2 levels and at 18 °C. Coccosphere-sized particles showed a size reduction with both increasing temperature and CO2concentration. The influence of the different treatments on coccolith morphology was studied by categorizing SEM coccolith micrographs. The number of well-formed coccoliths decreased with increasing pCO2 while temperature did not have a significant impact on coccolith morphology. No interacting effects of pCO2 and temperature were observed on calcite production, coccolith morphology or on coccosphere size. Finally, our results suggest that ocean acidification might have a larger adverse impact on coccolithophorid calcification than surface water warming.
DOI: 10.17632/kjn2s78n8w.1
title: Experimental Characterizing Tensile and Flexural Strength of Cotton Fabric Textile Waste Polyester Matrix Composite Materials for the Application of Car Hood

description: Currently, in Ethiopia and around the world, large amounts of ante- and post-mortem waste, such as clothing waste,
plastic waste, and cotton waste, contribute to air pollution. This waste is simply discarded and thrown into the
environment. Studying and characterizing this waste has many advantages. This work focused on the
characterization and study of the tensile and flexural strength properties of these wastes for lightweight automotive
body applications such as hoods.
DOI: 10.17632/kjn2s78n8w.2
title: dd

description: Currently, in Ethiopia and around the world, large amounts of ante- and post-mortem waste, such as clothing waste,
plastic waste, and cotton waste, contribute to air pollution. This waste is simply discarded and thrown into the
environment. Studying and characterizing this waste has many advantages. This work focused on the
characterization and study of the tensile and flexural strength properties of these wastes for lightweight automotive
body applications such as hoods.
DOI: 10.17632/rtzwmksbgz.1
title: A Compressive Review on the Bio composite materials with synthetic composites for the application of lightweight automotive body

description: A compressive review of the application area of natural fiber composite material specially in are of lightweight automobile body and structural applications.
DOI: 10.17632/rtzwmksbgz.2
title: delete

description: A compressive review of the application area of natural fiber composite material specially in are of lightweight automobile body and structural applications.
DOI: 10.17632/x9s7hymx8h.1
title: Track data for OTI T cell migration in the brain during T. gondii infection

description: The data contained in this spreadsheet are of the -x, -y, and -z coordinates of fluorescent T cells migrating in the brains of Toxoplasma gondii infected C57BL/6 mice. Mice were infected with a parasite strain expressing ovalbumin (Pru-OVA) for four weeks. Activated GFP-expressing OT-I T cells were transferred to the mice and imaged by multiphoton microscopy seven days later. Microscopy was performed on explanted brain as described in Harris, et al. Nature. 2012. In this dataset, each T cell has a track ID that corresponds to a single cell. The three-dimensional coordinates are provided along with the corresponding time series.
DOI: 10.18120/fd29-pj27
title: A NWB-based dataset and processing pipeline of human single-neuron activity during a declarative memory task
DOI: 10.13140/rg.2.2.33381.78562
title: Funding Issues in Emergency Management Latin American Countries
DOI: 10.13140/rg.2.2.16604.56963
title: Funding Issues in Emergency Management Latin American Countries
DOI: 10.13140/rg.2.2.30026.34242
title: Funding Issues in Emergency Management Latin American Countries
DOI: 10.18120/qv7a-s473
title: Data for: Neurons detect cognitive boundaries to structure episodic memories in humans (Zheng et al., 2022, Nat Neuro in press)
DOI: 10.5281/zenodo.8092099
title: blastophysa_rhizopus_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.8092098
title: blastophysa_rhizopus_spades_01.fasta.gz

description: .
DOI: 10.15468/7nwvsz
title: Seawater carbonate chemistry and boron incorporation of planktic foraminifer Orbulina universa during experiments, 2011

description: Culture experiments with living planktic foraminifers reveal that the ratio of boron to calcium (B/Ca) in Orbulina universa increases from 56 to 92 µmol mol-1 when pH is raised from 7.61 +/- 0.02 to 8.67 +/- 0.03 (total scale). Across this pH range, the abundances of carbonate, bicarbonate, and borate ions also change (+ 530, - 500, and + 170 µmol kg-1, respectively). Thus specific carbonate system control(s) on B/Ca remain unclear, complicating interpretation of paleorecords. B/Ca in cultured O. universa also increases with salinity (55-72 µmol mol-1 from 29.9-35.4 per mil) and seawater boron concentration (62-899 µmol mol-1 from 4-40 ppm B), suggesting that these parameters may need to be taken into account for paleorecords spanning large salinity changes (~ 2 per mil) and for samples grown in seawater whose boron concentration ([B]SW) differs from modern by more than 0.25 ppm. While our results are consistent with the predominant incorporation of the charged borate species B(OH)4 into foraminiferal calcite, the behavior of the partition coefficient KD (defined as [B/Ca]calcite/B(OH)4/HCO3seawater) cannot be explained by borate incorporation alone, and suggests the involvement of other pH-sensitive ions such as CO3 For a given increase in seawater B(OH)4, the corresponding increase in B/Ca is stronger when B(OH)4 is raised by increasing [B]SW than when it is raised by increasing pH. These results suggest that B incorporation controls should be reconsidered. Additional insight is gained from laser-ablation ICP-MS profiles, which reveal variable B/Ca distributions within individual shells.
DOI: 10.6084/m9.figshare.23593782
title: Supplementary tables

description: Supplementary tables (excel formatted).
DOI: 10.6084/m9.figshare.23593782.v1
title: Supplementary tables

description: Supplementary tables (excel formatted).
DOI: 10.5517/ccdc.csd.cc2fbf29
title: CCDC 2244340: Experimental Crystal Structure Determination

description: Related Article: Shanmuga Priya B, D. Rajan Babu|2023|J.Mol.Struct.|1291|135980|doi:10.1016/j.molstruc.2023.135980
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/3zhpps
title: Incorporation of Mg and Sr in calcite of cultured benthic foraminifera (Heterostegina depressa and Ammonia tepida) and seawater carbonate chemistry, 2010

description: We investigated the effect of the calcium concentration in seawater and thereby the calcite saturation state (omega) on the magnesium and strontium incorporation into benthic foraminiferal calcite under laboratory conditions. For this purpose individuals of the shallow-water species Heterostegina depressa (precipitating high-Mg calcite, symbiont-bearing) and Ammonia tepida (low-Mg calcite, symbiont-barren) were cultured in media under a range of [Ca2+], but similar Mg/Ca ratios. Trace element/Ca ratios of newly formed calcite were analysed with Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP-MS) and normalized to the seawater elemental composition using the equation DTE=(TE/Cacalcite)/(TE/Caseawater). The culturing study shows that DMg of A. tepida significantly decreases with increasing omega at a gradient of -4.3x10-5 per omega unit. The DSr value of A. tepida does not change with omega, suggesting that fossil Sr/Ca in this species may be a potential tool to reconstruct past variations in seawater Sr/Ca. Conversely, DMg of H. depressa shows only a minor decrease with increasing omega, while DSr increases considerably with omega at a gradient of 0.009 per omega unit. The different responses to seawater chemistry of the two species may be explained by a difference in the calcification pathway that is, at the same time, responsible for the variation in the total Mg incorporation between the two species. Since the Mg/Ca ratio in H. depressa is 50-100 times higher than that of A. tepida, it is suggested that the latter exhibits a mechanism that decreases the Mg/Ca ratio of the calcification fluid, while the high-Mg calcite forming species may not have this physiological tool. If the dependency of Mg incorporation on seawater [Ca2+] is also valid for deep-sea benthic foraminifera typically used for paleostudies, the higher Ca concentrations in the past may potentially bias temperature reconstructions to a considerable degree. For instance, 25 Myr ago Mg/Ca ratios in A. tepida would have been 0.2 mmol/mol lower than today, due to the 1.5 times higher [Ca2+] of seawater, which in turn would lead to a temperature underestimation of more than 2 °C.
DOI: 10.5517/ccdc.csd.cc2fjjcw
title: CCDC 2250208: Experimental Crystal Structure Determination

description: Related Article: Lingyu Kong, Yajie Chou, Muriel Albalat, Marion Jean, Nicolas Vanthuyne, Stéphane Humbel, Paola Nava, Hervé Clavier|2023|Dalton Trans.|52|8728|doi:10.1039/D3DT01182H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fjjdx
title: CCDC 2250209: Experimental Crystal Structure Determination

description: Related Article: Lingyu Kong, Yajie Chou, Muriel Albalat, Marion Jean, Nicolas Vanthuyne, Stéphane Humbel, Paola Nava, Hervé Clavier|2023|Dalton Trans.|52|8728|doi:10.1039/D3DT01182H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fjjl3
title: CCDC 2250215: Experimental Crystal Structure Determination

description: Related Article: Lingyu Kong, Yajie Chou, Muriel Albalat, Marion Jean, Nicolas Vanthuyne, Stéphane Humbel, Paola Nava, Hervé Clavier|2023|Dalton Trans.|52|8728|doi:10.1039/D3DT01182H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g5dcf
title: CCDC 2269304: Experimental Crystal Structure Determination

description: Related Article: Sérgio M. Vilas-Boas, Paula Brandão, Mónia A.R. Martins, Liliana P. Silva, Tatiana B. Schreiner, Luciano Fernandes, Olga Ferreira, Simão P. Pinho|2018|J.Mol.Liq.|272|1048|doi:10.1016/j.molliq.2018.10.108
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/v2taac
title: Seawater carbonate chemistry, nutrients, and Calcidiscus leptoporus (strain RCC1135) growth rate and calcification rate during experiments, 2012

description: The coccolithophore Calcidiscus leptoporus was grown in batch culture under nitrogen (N) as well as phosphorus (P) limitation. Growth rate, particulate inorganic carbon (PIC), particulate organic carbon (POC), particulate organic nitrogen (PON), and particulate organic phosphorus (POP) production were determined and coccolith morphology was analysed. While PON production decreased by 70% under N-limitation and POP production decreased by 65% under P-limitation, growth rate decreased by 33% under N- as well as P-limitation. POC as well as PIC production (calcification rate) increased by 27% relative to the control under P-limitation, and did not change under N-limitation. Coccolith morphology did not change in response to either P or N limitation. While these findings, supported by a literature survey, suggest that coccolith morphogenesis is not hampered by either P or N limitation, calcification rate might be. The latter conclusion is in apparent contradiction to our data. We discuss the reasons for this inference.
DOI: 10.6084/m9.figshare.23592363.v4
title: Dataset_for_analysis_and_scripts

description: See readme.txt file.
DOI: 10.15468/6mrjdu
title: Seawater carbonate chemistry and processes during experiments with phytoplankton Emiliania huxleyi (strain Bergen 2005), 2010

description: The response of the coccolithophore Emiliania huxleyi to rising CO2 concentrations is well documented for acclimated cultures where cells are exposed to the CO2 treatments for several generations prior to the experiment. The exact number of generations required for acclimation to CO2-induced changes in seawater carbonate chemistry, however, is unknown. Here we show that Emiliania huxleyi's short-term response (26 h) after cultures (grown at 500 µatm) were abruptly exposed to changed CO2 concentrations (~190, 410, 800 and 1500 ?atm) is similar to that obtained with acclimated cultures under comparable conditions in earlier studies. Most importantly, from the lower CO2 levels (190 and 410 ?atm) to 750 and 1500 µatm calcification decreased and organic carbon fixation increased within the first 8 to 14 h after exposing the cultures to changes in carbonate chemistry. This suggests that Emiliania huxleyi rapidly alters the rates of essential metabolical processes in response to changes in seawater carbonate chemistry, establishing a new physiological "state" (acclimation) within a matter of hours. If this relatively rapid response applies to other phytoplankton species, it may simplify interpretation of studies with natural communities (e.g. mesocosm studies and ship-board incubations), where often it is not feasible to allow for a pre-conditioning phase before starting experimental incubations.
DOI: 10.6084/m9.figshare.23592363
title: Dataset_for_analysis

description: See readme.txt file.
DOI: 10.6084/m9.figshare.23592363.v5
title: Sex and age differences in the preference for materials for the communal nests of sociable weavers Philetairus socius.

description: See readme.txt file.
DOI: 10.15468/m6q2xd
title: PeECE II - Pelagic Ecosystem CO2 Enrichment Study, Raunefjord, Bergen, Norway

description: The effects of CO2-induced seawater acidification on plankton communities were also addressed in a series of 3 mesocosm experiments, called the Pelagic Ecosystem CO2 Enrichment (PeECE I-III) studies, which were conducted in the Large-Scale Mesocosm Facilities of the University of Bergen, Norway in 2001, 2003 and 2005, respectively. Each experiment consisted of 9 mesocosms, in which CO2 was manipulated to initial concentrations of 190, 350 and 750 µatm in 2001 and 2003, and 350, 700 and 1050 µatm in 2005. The present dataset concerns PeECE II.
DOI: 10.15468/fcuj4a
title: Lower Albian LArboudeysse (Niveau Paquier) range chart in percentages of nannofossils, in SE France
DOI: 10.26207/53vq-g344
title: Architecture and dynamics of a desmosome-endoplasmic reticulum complex
DOI: 10.15468/sqsmex
title: Late Albian Col de Palluel (SE France, Niveau Breistroffer): results from planktic foraminifera
DOI: 10.5281/zenodo.7660312
title: Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease

description: Collection of auxiliary data to reproduce the results from "Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease". Source code is available at: https://github.com/saezlab/MOFAcell Exceptions: Spatial data is excluded This folder contains processed data of the following publications, when using the data cite accordingly:<br> 1) Kuppe C, Ramirez Flores RO, Li Z, Hayat S, Levinson RT, Liao X, Hannani MT, Tanevski J, Wünnemann F, Nagai JS, et al (2022) Spatial multi-omic map of human myocardial infarction. Nature 608: 766–777<br> 2) Ramirez Flores RO, Lanzer JD, Holland CH, Leuschner F, Most P, Schultz J-H, Levinson RT & Saez-Rodriguez J (2021) Consensus Transcriptional Landscape of Human End-Stage Heart Failure. J Am Heart Assoc 10: e019667<br> 3) Reichart D, Lindberg EL, Maatz H, Miranda AMA, Viveiros A, Shvetsov N, Gärtner A, Nadelmann ER, Lee M, Kanemaru K, et al (2022) Pathogenic variants damage cell composition and single cell transcription in cardiomyopathies. Science 377: eabo1984<br> 4) Chaffin M, Papangeli I, Simonson B, Akkad A-D, Hill MC, Arduini A, Fleming SJ, Melanson M, Hayat S, Kost-Alimova M, et al (2022) Single-nucleus profiling of human dilated and hypertrophic cardiomyopathy. Nature 608: 174–180
DOI: 10.57967/hf/0823
title: pii-masking-43k
DOI: 10.57967/hf/0824
title: pii-masking-43k
DOI: 10.5281/zenodo.8082895
title: Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease

description: Collection of auxiliary data to reproduce the results from "Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease". Source code is available at: https://github.com/saezlab/MOFAcell Exceptions: Spatial data is excluded This folder contains processed data of the following publications, when using the data cite accordingly:<br> 1) Kuppe C, Ramirez Flores RO, Li Z, Hayat S, Levinson RT, Liao X, Hannani MT, Tanevski J, Wünnemann F, Nagai JS, et al (2022) Spatial multi-omic map of human myocardial infarction. Nature 608: 766–777<br> 2) Ramirez Flores RO, Lanzer JD, Holland CH, Leuschner F, Most P, Schultz J-H, Levinson RT & Saez-Rodriguez J (2021) Consensus Transcriptional Landscape of Human End-Stage Heart Failure. J Am Heart Assoc 10: e019667<br> 3) Reichart D, Lindberg EL, Maatz H, Miranda AMA, Viveiros A, Shvetsov N, Gärtner A, Nadelmann ER, Lee M, Kanemaru K, et al (2022) Pathogenic variants damage cell composition and single cell transcription in cardiomyopathies. Science 377: eabo1984<br> 4) Chaffin M, Papangeli I, Simonson B, Akkad A-D, Hill MC, Arduini A, Fleming SJ, Melanson M, Hayat S, Kost-Alimova M, et al (2022) Single-nucleus profiling of human dilated and hypertrophic cardiomyopathy. Nature 608: 174–180
description: Data from publication
DOI: 10.5281/zenodo.7660311
title: Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease

description: Collection of auxiliary data to reproduce the results from "Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease". Source code is available at: https://github.com/saezlab/MOFAcell Exceptions: Spatial data is excluded This folder contains processed data of the following publications, when using the data cite accordingly:<br> 1) Kuppe C, Ramirez Flores RO, Li Z, Hayat S, Levinson RT, Liao X, Hannani MT, Tanevski J, Wünnemann F, Nagai JS, et al (2022) Spatial multi-omic map of human myocardial infarction. Nature 608: 766–777<br> 2) Ramirez Flores RO, Lanzer JD, Holland CH, Leuschner F, Most P, Schultz J-H, Levinson RT & Saez-Rodriguez J (2021) Consensus Transcriptional Landscape of Human End-Stage Heart Failure. J Am Heart Assoc 10: e019667<br> 3) Reichart D, Lindberg EL, Maatz H, Miranda AMA, Viveiros A, Shvetsov N, Gärtner A, Nadelmann ER, Lee M, Kanemaru K, et al (2022) Pathogenic variants damage cell composition and single cell transcription in cardiomyopathies. Science 377: eabo1984<br> 4) Chaffin M, Papangeli I, Simonson B, Akkad A-D, Hill MC, Arduini A, Fleming SJ, Melanson M, Hayat S, Kost-Alimova M, et al (2022) Single-nucleus profiling of human dilated and hypertrophic cardiomyopathy. Nature 608: 174–180
description: Data from publication
DOI: 10.7294/23589168
title: InSAR deformation and Groundwater level for Santa Clara Valley aquifer system

description: InSAR vertical deformation time series during 2017-2022 from Sentinel-1 images over Santa Clara Valley aquifer system. Figures showing the comparison between InSAR vertical deformation and groundwater level time series for 71 wells located in the Santa Clara Valley aquifer system are also included.
DOI: 10.13140/rg.2.2.27824.33287
title: Widespread permafrost degradation and thaw subsidence in northwest Canada - Dataset ds01.csv
DOI: 10.13140/rg.2.2.34535.21922
title: Widespread permafrost degradation and thaw subsidence in northwest Canada - Dataset ds01.csv
DOI: 10.13140/rg.2.2.26146.61127
title: Widespread permafrost degradation and thaw subsidence in northwest Canada - Dataset ds01.csv
DOI: 10.13140/rg.2.2.19435.72483
title: Widespread permafrost degradation and thaw subsidence in northwest Canada - Dataset ds01.csv
DOI: 10.13140/rg.2.2.16080.28164
title: Widespread permafrost degradation and thaw subsidence in northwest Canada - Dataset ds01.csv