cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.v23517k/2
title: Covariate data by grid ID

description: This file contains covariate data associated with the grid ID (site). The 'Site' column in this file corresponds to the "Site" column in the surveillance data file. For each site the latitude and longitude of the grid cell centroid is provided. If the grid cell was in the ORV zone (at least half of the cell was within the zone) the "ORV" column gives a 1 if the cell was in the zone and a 0 if not. The percentage of habitat cover for the grid cell is provided for the following habitat types: Cult (cultivated crops), DFMF (deciduous and mixed forest cover), EVF (evergreen forest cover), Hay (hay and pasture land), MedHi (medium and high development areas), OpenLow (open and low development areas), and WT (wetlands).
DOI: 10.17632/7pdjt9h8fr.1
title: Data for: Rhabdomyolysis and spine surgery: a systematic review of the literature.

description: Despite the rarity of rhabdomyolysis, it is important for spine surgeons to be familiar with possible complication
DOI: 10.17632/brcp77wnm2.1
title: Data for: Autoantibodies-targeted-TAAs in pancreatic cancer: a comprehensive analysis

description: original data of 98 TAAs in pancreatic cancer and
DOI: 10.17632/f6v7twp4g5.1
title: A study of SENP2 Suppresses Necdin Expression to Promote Brown Adipocyte Differentiation. Liang et al

description: SENP2 catalyzes de-SUMOylation of CREB to suppress Necdin expression leading to BMP7-induced brown pre-adipocyte differentiation, which is essential for BAT adipogenesis.
DOI: 10.5061/dryad.16bc7f2/1
title: GPS tracking data on lowland tapir
DOI: 10.5061/dryad.2qv284p/1
title: STFL male morphology - EPP

description: morphological data for extra-pair paternity data
DOI: 10.5061/dryad.2qv284p/2
title: STFL male color - EPP

description: color measurements for extra-pair paternity
DOI: 10.5061/dryad.2qv284p/3
title: STFL female morphology - EPP

description: female morphology for extra-pair paternity
DOI: 10.5061/dryad.2qv284p/4
title: STFL female color - EPP

description: female color for extra-pair paternity
DOI: 10.5061/dryad.2qv284p/5
title: STFL mensural - cuckold

description: paired morphological data for cuckoldry
DOI: 10.5061/dryad.2qv284p/6
title: STFL color - cuckold

description: paired color data for cuckoldry
DOI: 10.5061/dryad.2qv284p/7
title: STFL flight tube

description: data for maneuverability through flight tube
DOI: 10.5061/dryad.34db1gr/1
title: Global Patterns in Coronavirus Diversity Data_Final

description: Dataset used for analysis in Global Patterns in Coronavirus Diversity, includes coronavirus test results listed by individual tests. Dataset includes Animal ID, Specimen ID, test protocol and host factors
DOI: 10.5061/dryad.4n7n883/2
title: Nilgiri_seedling survival across habitat and soil_data

description: Data on survival of native and invasive tree species seedlings across the habitats and soils recorded from the replicated in-situ experiment in the Nilgiri hills of the Western Ghats.
DOI: 10.5061/dryad.4n7n883/3
title: Nilgiri_ seedling survival_experimental warming_data

description: Data on the survival of native and invasive tree species seedlings in the control and experimental warming treatment recorded from the replicated in-situ experiment in the Nilgiri hills of the Western Ghats.
DOI: 10.5061/dryad.7v62484/1
title: Wilson-Aggarwal Dog networks data

description: Dog meta data, network contact matrices for two villages and household distance matrices.
DOI: 10.5061/dryad.7v62484/2
title: WIlson-Aggarwal Dog networks R code

description: R code for disease model
DOI: 10.5061/dryad.8g71v4s/1
title: Gremer_germinationtimingexper_phenotypeandfitnessdata

description: Data from the germination timing experiment
DOI: 10.5061/dryad.8g71v4s/2
title: Gremer_vernexperiment_phenotypeandfitnessdata

description: Data for the vernalization experiment
DOI: 10.5061/dryad.9kj2fr6/2
title: EC Cyonasua Figure S2

description: FIGURE S2. Enlarged region of the sparassodont morphospace, with the four groups discussed in the main article circled. Legend for symbols is the same as Figure 1.
DOI: 10.5061/dryad.bd6m135/10
title: Estenstad forest, Norway
DOI: 10.5061/dryad.bd6m135/11
title: Hubbard Brook Experimental Forest, New Hampshire, U.S.A.
DOI: 10.5061/dryad.bd6m135/12
title: William Trelease Woods, Illinois, U.S.A
DOI: 10.5061/dryad.bd6m135/5
title: Bialowieza forest, plot MS
DOI: 10.5061/dryad.bd6m135/6
title: Bialowieza forest, plot NE
DOI: 10.5061/dryad.bd6m135/7
title: Bialowieza forest, plot NW
DOI: 10.5061/dryad.bd6m135/8
title: Bialowieza forest, plot W
DOI: 10.5061/dryad.bd6m135/9
title: Gaisatjakke and Valle Mts, Sweden
DOI: 10.5061/dryad.f3bn03g/1
title: Respiratory rate data for six neonatal intensive care units used for statistical analysis

description: In the attached data, 'ip' is the respiration rate measured by the impendance pneumography method, and 'radar' is the respiration rate measured by the IR-UWB radar sensor. Also, 'pt' is a number assigned to classify six patients, and 'move' is a measure of the degree of movement of the patient when measured by two sensors. Each sample is the number of breaths calculated over a 30 second window size. In this manuscript, correlation plot and bland-altman analysis were performed according to the size of the move.
DOI: 10.5061/dryad.f45gh6s/10
title: R scripts for plotting figures and performing statistical analysis

description: This zip file contains the R scripts used to plot figures 3, 4, 5, S9 and S19, and to perform the statistical calculations presented in the paper.
DOI: 10.5061/dryad.f45gh6s/11
title: Selected organisms algorithms

description: This zip files contain the annotated assembly code of three organisms from a single lineage from Experiment 2. The three organisms are Error Recoverer 2, First Learner, and Final Organism mentioned in the Supplementary Information. The zip file also contains figure S19.
DOI: 10.5061/dryad.f45gh6s/12
title: Video "The Evolutionary Origin of Associative Learning"

description: Video with the animated path of organisms from a single lineage from Experiment 2, showing different stages in the evolution of behavior.
DOI: 10.5061/dryad.f45gh6s/13
title: Supplementary Information
DOI: 10.5061/dryad.f45gh6s/7
title: Raw data from the Preliminary Experiment

description: This zip file contains the Avida raw data output for the Preliminary Experiment. The data is divided in four folders according to the experimental environment (treatment): Nutrient Cued, One Fixed Turn, Random Start, and Two Fixed Turns. Under a given environment folder the data from each replicate is stored in individual sub-folders. In addition, each environment folder contains a sub-folder "Experiment_configuration_files" with the files necessary to configure Avida to recreate the particular experiment.
DOI: 10.5061/dryad.f45gh6s/8
title: Raw data from Follow Up Experiment

description: This zip file contains the Avida raw data output for the Follow Up Experiment. The data is divided in 200 folders, one for each replicate. In addition, the zip file contains a folder "Experiment_configuration_files" with the files necessary to configure Avida to recreate this experiment.
DOI: 10.5061/dryad.f45gh6s/9
title: Avida Draw - organism's path plotting tool

description: This zip file contains the software Avida Draw, written in Python and used to plot the organisms' path in the arena. It saves .EPS images of both the arena and the organism's final path.
DOI: 10.5061/dryad.nk410t9/1
title: microsat genotypes

description: Estimated fragment lengths for microsatellites (genotypes) of several Darevskia species and hybrids
DOI: 10.5061/dryad.p20km22/1
title: README of Supplementary Materials on DRYAD of Kuelheim et al. 2019 (Plos ONE), DOI:10.1371/journal.pone.0218995

description: Readme file to all Supplementary Archives deposited on DRYAD of Kuelheim et al. 2019 (Plos ONE)
DOI: 10.5061/dryad.p20km22/2
title: Supplementary Archive 1

description: Supplementary Archive 1: This archive contains all reference sequences and sequences used for probe design (FASTA format) of 212 loci and of one Eucalyptus and a consensus of four Melaleuca species.
DOI: 10.5061/dryad.p20km22/3
title: Supplementary Archive 3

description: Supplementary Archive 3: This archive contains following subdirectories i) subdirectory supermatrix_209_loci and ii) subdirectory ML_inference (see README)
DOI: 10.5061/dryad.p20km22/4
title: Supplementary Archive 2

description: Supplementary Archive 2: Short read archive (raw reads) of 47 multiplexed Myrtaceae samples for the target enrichment approach for 212 loci.
DOI: 10.5061/dryad.pf8011h/10
title: TPL file for historical demography model C

description: Historical demography model C specified for program FastSimCoal.
DOI: 10.5061/dryad.pf8011h/11
title: EST file for historical demography model D

description: Historical demography model D specified for program FastSimCoal.
DOI: 10.5061/dryad.pf8011h/3
title: Input data for program TreeMix

description: Samples collected in the field. RADseq data processed as explained in the text with program AftrRAD 4.1 in order to produce this input file.
DOI: 10.5061/dryad.pf8011h/4
title: Input site frequency spectrum data for program FastSimCoal

description: Samples collected in the field. RADseq data processed as explained in the text with program AftrRAD 4.1 in order to produce this input file.
DOI: 10.5061/dryad.pf8011h/5
title: EST file for historical demography model A

description: Historical demography model A specified for program FastSimCoal.
DOI: 10.5061/dryad.pf8011h/6
title: TPL file for historical demography model A

description: Historical demography model A specified for program FastSimCoal.
DOI: 10.5061/dryad.pf8011h/7
title: EST file for historical demography model B

description: Historical demography model B specified for program FastSimCoal.
DOI: 10.5061/dryad.pf8011h/8
title: TPL file for historical demography model B

description: Historical demography model B specified for program FastSimCoal.
DOI: 10.5061/dryad.pf8011h/9
title: EST file for historical demography model C

description: Historical demography model C specified for program FastSimCoal.
DOI: 10.5061/dryad.qq086mk/1
title: UAV-RT Testing Results Data

description: See attached README file. The files have been compressed to a .zip file using Mac OS X Yosemite Version 10.10.5.
DOI: 10.5061/dryad.r1s93g8/1
title: Naguibetal_FiZ_Dataset

description: Excel file with data and Column explanations
DOI: 10.5061/dryad.t0p9c93/1
title: PARK_KAYSER_RecalMEG_2019

description: Please see README file.
DOI: 10.17632/2xjzc52zdy.1
title: Data for: Long-term shoreline monitoring on a coral reef island (Moorea, French Polynesia)

description: Quantitative evolution of coastline categorization of Moorea Island from 1977 to 2018. At Moorea, the coastline is characterized by seven main habitat categories (Aubanel et al. 1999): 1/ Rocks and broken stones in their original positions (the rocks, either basaltic or carbonate, are over 50 cm in diameter and broken stones are 5-50 cm in size), 2/ White sand beach (at least 95% of which comprises coral sediments under 1 cm in size and the intertidal zone is not encumbered with vegetation), 3/ Black sand beach (same as white sand but with sediments of basaltic nature), 4/ Muddy areas or herbaceous zones, possibly with mangroves, 5/ Coarse mud-and-sand and detrital substrate with high vegetation area where Cocos nucifera, Hibiscus tiliaceus, Casuarina equisetifolia and Guettarda speciosa grow, 6/ Conglomerate and beach-rock and 7/ Anthropogenic changes (through walls, rocks and/or embankments).
DOI: 10.17632/gvmbbvymcg.1
title: Data for: Scapolite and analcime: monitors of hydrothermal fluids that altered plutonic rocks in a major shear zone

description: SUPPLEMENTARY DATA Appendix 1. Backscattered electron images showing locations of WDS analyses of scapolite. Supplementary Table 1. WDS analyses of analcime Supplementary Table 2. EDS analyses of scapolite. Supplementary Table 3. WDS analyses of scapolite. Supplementary Figure 1: Polished slab of syenite (sample 9928a) Supplementary Figure 2: Feather-like scapolite in syenite with small gabbro blocks. Supplementary Figure 3: Mineralogy of diorite (sample 9954). Supplementary Figure 4: Alteration of diorite (BSE images, sample 9954) Supplementary Figure 5: Vein of quartz-chlorite-calcite in syenite (BSE image and X-ray maps, sample 9956c). Supplementary Figure 6. Scapolite (Scp) veins and patches cutting diorite (Dt) (sample 9958, Fig. 3C). Supplementary Figure 7: Scapolite (Scp) veins cutting diorite (Dt). Supplementary Figure 8: Fibrous anthophyllite filling a void between analcime crystals.
DOI: 10.17632/z64h7c965d.1
title: Data for: Source of supplemental dietary fat interacts with relative proportion of forage source in Holstein dairy cows: Production responses, and milk fat composition, rumen fermentation

description: Main manuscript
DOI: 10.5061/dryad.087g0k7/1
title: Balebail_Raja_and_Sane_2019

description: Contains videos of landings on vertical and inverted surfaces. Also contains the xyz coordinate files, and the MATLAB codes used to compute kinematic variables.
DOI: 10.5061/dryad.2687ks0/1
title: Male Maturity Data - lab common gardens

description: Dependent values for the four common garden assays of age and size at maturity in males
DOI: 10.5061/dryad.2687ks0/2
title: MaleMatingSuccessData

description: Mating success of males derived from the pedigree for the Lower LaLaja stream.
DOI: 10.5061/dryad.2687ks0/3
title: MaleReproductiveSuccess

description: Reproductive success of males in the Lower LaLaja, based on the number of offspring in the pedigree assigned to each male.
DOI: 10.5061/dryad.2687ks0/4
title: Pedigree for lab common garden

description: Pedigree of individuals included in the laboratory common garden experiments
DOI: 10.5061/dryad.37jj6t9.2
title: Data from: Total-evidence approach reveals an extinct lineage of Paederinae rove beetles from Cretaceous Burmese amber
DOI: 10.5061/dryad.37jj6t9.2/14.2
title: Appendix S1

description: Appendix S1. Pieces of Burmese amber with inclusions of the studied specimens of Diminudon gen. nov. An insect pin head used as a scale. Scale bar represents 1 mm.
DOI: 10.5061/dryad.37jj6t9.2/15.2
title: Appendix S2

description: Appendix S2. List of morphological characters.
DOI: 10.5061/dryad.37jj6t9.2/16.2
title: Appendix S3

description: Appendix S3. Matrix of morphological characters.
DOI: 10.5061/dryad.37jj6t9.2/17.2
title: Appendix S4

description: Appendix S4. Complete primer details.
DOI: 10.5061/dryad.37jj6t9.2/18.2
title: Appendix S5

description: Appendix S5. GenBank accession numbers of all sequences.
DOI: 10.5061/dryad.3b025hh/12
title: Supplementary file 1

description: Inferred GRNs in cytoscape file format
DOI: 10.5061/dryad.3b025hh/13
title: Supplementary file 2

description: KEGG pathway analysis of differentially expressed genes from GRN modules
DOI: 10.5061/dryad.44s7s99/1
title: Functional response (consumption data) of Cepaea nemoralis

description: Raw consumption data of C. nemoralis individuals used for generating functional response curves and analyzing 'a' and 'h' parameters.
DOI: 10.5061/dryad.44s7s99/2
title: Functional response (consumption data) of Mesodon thyroidus

description: Raw consumption data of M. thyroidus individuals used for generating functional response curves and analyzing 'a' and 'h' parameters.
DOI: 10.5061/dryad.44s7s99/3
title: Odour detection times

description: Odour detection times for individuals of each species (Mesodon thyroidus and Cepaea nemoralis) across different food levels and food treatments.
DOI: 10.5061/dryad.44s7s99/4
title: Joint foraging consumption data

description: Consumption data of Mesodon thyroidus and Cepaea nemoralis in joint foraging scenarios. 'Density' represents the total number of food items supplied in each replicate.
DOI: 10.5061/dryad.451c4s2/1
title: experimental data
DOI: 10.5061/dryad.57q7865/2
title: Data for distance-dependent seed‒seedling transition in the tree Castanopsis sclerophylla is altered by fragment size

description: Data are divided into three sheets matching different parts of data analysis in the manuscript, i.e. DTNCTs, DTNISs and rodent density. In the sheets of DTNCTs and DTNISs, each row represents a seed and a column indicates a status or character of seeds. In the sheet of rodent density, each row represents an experimental site.
DOI: 10.5061/dryad.6c642t3/1
title: EXDATA_nflorian

description: Raw data file, from the field manipulation
DOI: 10.5061/dryad.7b980d8/1
title: Validation of selected genes obtained from RNA-seq by q-PCR.

description: Figure S1. Viladation of selected genes obtained from RNA-seq by q-PCR.
Primary cortical neurons were exposed to hyoixa (0.2% oxygen) for 7 hours
either in the presence or absence of 5nm T3. Total RNA was isolated from cells,
reverse transcribed, and evaluated by q-PCR. The q-PCR was performed in
triplicates and three housekeeping genes were included as controls
(GAPDH, B-actin and cyclophilin A).
DOI: 10.5061/dryad.97q0n06/1
title: DNA barcoding data

description: Seed-deposition samples (bird droppings with seeds, defecated or regurgitated) analysed through DNA barcoding to identify the bird species responsible of seed dispersal events. Disperser identifications are classified as Sardinian warbler (Sylvia melanocephala) versus other bird species. Only those samples that were dispersed by Sardinian warblers (i.e. the ones used in this study) include fields for sequence, sequence length and source of barcoding identification.
DOI: 10.5061/dryad.97q0n06/2
title: Seed rain contributions

description: Relative and absolute contributions – according to DNA-barcoding identifications – of Sardinian warblers (Sylvia melanocephala) and other bird species to the bimonthly magnitude of seed deposition per seed trap, bimonth and year, of different plant species.
DOI: 10.5061/dryad.97q0n06/3
title: Seed rain data

description: Total number of seeds (all species pooled; zeros included) per seed trap, bimonth and year, estimated as dispersed by Sardinian warblers (and other bird species) according to DNA-barcoding identifications. This is the dataset associated to Figure 1c and Figure 2.
DOI: 10.5061/dryad.97q0n06/4
title: Habitat classification ringing data

description: Classification of the original habitat types associated to each ringing capture into habitats analogous to the forest (i.e. woodland habitats) and matrix (i.e. open habitats) of our study landscape.
The original ringing data used in this study can be requested to SEO/BirdLife (www.anillamientoseo.org).
DOI: 10.5061/dryad.97q0n06/5
title: Ringing captures & Mean seed rain

description: Accumulated number of bimonthly ringing captures of juvenile and adult Sardinian warblers (Sylvia melanocephala) between 1975 and 2018, in a subset of the warm Spanish provinces dominated by the thermo- and meso-Mediterranean bioclimate, in relation to bimonthly mean seed rain dispersed by Sardinian warblers in our study landscape (data associated to Figure 2 in the article).
The original ringing data used in this study can be requested to SEO/BirdLife (www.anillamientoseo.org).
DOI: 10.5061/dryad.9kj2fr6/3
title: EC Cyonasua Paper Supplementary Information

description: Online supplementary information for "Strangers in a strange land: Ecological dissimilarity to metatherian carnivores may partly explain early colonization of South America by Cyonasua-group procyonids"
DOI: 10.5061/dryad.bd6m135/13
title: Sramkova National Nature Reserve, Slovakia
DOI: 10.5061/dryad.bd6m135/14
title: Finsefetene sedimentation flat, Norway
DOI: 10.5061/dryad.bd6m135/15
title: Dalby Söderskog National Park, Sweden
DOI: 10.5061/dryad.bd6m135/16
title: Ammarnäs region, Sweden
DOI: 10.5061/dryad.bd6m135/17
title: Birdsong valley, Sweden
DOI: 10.5061/dryad.bd6m135/18
title: Słowacki park, City of Wrocław, Poland
DOI: 10.5061/dryad.c157v0v/1
title: erato_collected_2015

description: A .csv file containing data on every H. erato we collected across the hybrid zone. Each row is a single butterfly.
DOI: 10.5061/dryad.c157v0v/2
title: collection_sites_2015

description: A .csv file giving the GPS coordinates of each collecting site and subsite.
DOI: 10.5061/dryad.c157v0v/3
title: thurman_allClines

description: An .Rdata file containing the Stan model fit results for all 5 cline models for the 2015 collections.
DOI: 10.5061/dryad.c157v0v/4
title: mallet_allClines

description: An .Rdata file containing the Stan model fit results for all 5 cline models for the 1982 collections.
DOI: 10.5061/dryad.c157v0v/5
title: blum_allClines

description: An .Rdata file containing the Stan model fit results for all 5 cline models for the 1999-2000 collections.
DOI: 10.5061/dryad.c157v0v/6
title: forest_cover_archive1

description: A .zip archive containing the .tif files of NDVI data across Panama in 2000 and 2017.
DOI: 10.5061/dryad.c157v0v/7
title: forest_cover_archive2

description: A .zip archive containing the .tif files of the forest loss and change in NDVI across Panama.
DOI: 10.5061/dryad.j943d68/1
title: Seagrass case study data

description: The outputs of the Dynamic Bayesian Network (DBN) for the seagrass case study is stored in the data file in the variable D. As per section 2 of the paper, the dimensions of D are 96 (time slices) by 3024 (scenarios) by 75 (state variables).
DOI: 10.5061/dryad.j943d68/2
title: Seagrass case study code

description: This is the accompanying R script to the "seagrass case study data" data file. It reproduces all the analysis in the paper and generates the plots.
DOI: 10.5061/dryad.nk58h0m/1
title: Teets et al Proc B data

description: Excel spreadhseet containing all raw data included in manuscript and supplemental information.
DOI: 10.5061/dryad.p1m7167/1
title: Data- A novel technique to develop thoracic spinal laminectomy and a methodology to assess the functionality and welfare of the contusion SCI rat model

description: Data on all statistics done in a Microsoft Excel file format where all different sets of data are inserted in different sheets clearly.
DOI: 10.5061/dryad.pf8011h/12
title: TPL file for historical demography model D

description: Historical demography model D specified for program FastSimCoal.
DOI: 10.5061/dryad.qt8mr4v/1
title: Bumblebee_Data_Eggenberger_et.al_JAE_2019

description: Data file containing the individual trait measurements of the two bumblebee species, B. lapidarius and B. pascuorum, from urban and rural habitats in Switzerland
DOI: 10.5061/dryad.th8334d/1
title: Alignments

description: Multiple sequence alignment fasta files for each of the phototransduction gene analyzed in the study
DOI: 10.5061/dryad.th8334d/2
title: PAML Files

description: Input files for each PAML analysis
DOI: 10.5061/dryad.th8334d/3
title: PAML Results Tables

description: Detailed result tables in excel format for each of the PAML analyses
DOI: 10.5061/dryad.th8334d/4
title: FDR Control

description: Input and output files of the FDR control analyses, as well a results summary table in excel format
DOI: 10.5061/dryad.v815n58/1
title: Experiment 1 behavioral data

description: Raw output from mturk for behavioral experiment 1
DOI: 10.5061/dryad.v815n58/2
title: Experiment 2 behavioral data

description: Raw data from mturk for behavioral experiment 2
DOI: 10.5061/dryad.v815n58/3
title: Analysis code for behavioral experiment 1
DOI: 10.5061/dryad.v815n58/4
title: Analysis code for behavioral experiment 2
DOI: 10.5061/dryad.v815n58/5
title: Helper functions for analyzing behavioral data

description: Note that several external packages are used here, so you may need to install.packages to get these to work. All packages are on CRAN, except for rutabaga, which is a lab package available from GitHub: devtools::install_github('dipterix/rutabaga')
DOI: 10.17632/hfs347mjr7.1
title: Data for: 3395285

description: Survey results based on high school students responses to questions on beauty.
DOI: 10.5061/dryad.0ft1474/1
title: Data from sprayed fields

description: Experimental data (egg predation) from sprayed fields from seasons 2015/2016 and 2016/2017.