cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rkvh6n
title: Occurrence Download

description: A dataset containing 1952 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Galerina pumila (Pers.) Singer)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 1952 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0241148-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3104157/2344904
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.agm4bg
title: Occurrence Download

description: A dataset containing 268 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum welwitschii C.H.Wright"
 ]
}

 The dataset includes 268 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136930-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3103985/2344905
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.rqhxvs
title: Occurrence Download

description: A dataset containing 9676824 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Insecta",
 "HasCoordinate is true",
 "Country is one of (United Kingdom of Great Britain and Northern Ireland)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 9676824 records from 382 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0241175-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3104038/2344906
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.emjnez
title: Occurrence Download

description: A dataset containing 405199 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations, EOD – eBird Observation Dataset, DATAVES, Observation.org, Nature data from around the World, AMNH Bird Collection, Atlas de las Aves de México: Fase II, NMNH Extant Specimen Records (USNM, US), Monitoreo de fauna en el área de influencia del Proyecto Hidroeléctrico Ituango, durante los años 2012 - 2013 y 2018 - 2021, Xeno-canto - Bird sounds from around the world, Field Museum of Natural History (Zoology) Bird Collection)",
 "License is one of (CC0 1.0, CC-BY 4.0, CC-BY-NC 4.0)",
 "TaxonKey is Piaya cayana (Linnaeus, 1766)"
 ]
}

 The dataset includes 405199 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002166-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cdc8vd
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chelaethiops rukwaensis (Ricardo, 1939)"
 ]
}

 The dataset includes 17 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0334027-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3104027/2344907
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.jwgzbs
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stenospermation flavescens Engl."
 ]
}

 The dataset includes 32 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0143539-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3103903/2344908
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.mz7wsk
title: Occurrence Download

description: A dataset containing 704 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Telestes muticellus (Bonaparte, 1837)"
 ]
}

 The dataset includes 704 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0334033-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5f69qu
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Taraxacum flos-lacus Kirschner & Stepánek"
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006485-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3104151/2344909
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.ucxpjq
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Schizolobium parahyba var. amazonicum (Huber ex Ducke) Barneby"
 ]
}

 The dataset includes 129 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0433413-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3104138/2344910
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.u67shw
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrobium sinense Tang & F.T.Wang"
 ]
}

 The dataset includes 28 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011782-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z869tv
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lithogenes wahari Schaefer & Provenzano, 2008"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0334028-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3104136/2344911
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.sh4jt5
title: Occurrence Download

description: A dataset containing 488 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum sucrense Hawkes"
 ]
}

 The dataset includes 488 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136938-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nqemts
title: Occurrence Download

description: A dataset containing 1742 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Galerina clavata (Velen.) Kühner)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 1742 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0241138-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3104069/2344912
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.5da7s6
title: Occurrence Download

description: A dataset containing 4656 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum aethiopicum L."
 ]
}

 The dataset includes 4656 records from 160 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136939-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3103895/2344913
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.vjc7nx
title: Occurrence Download

description: A dataset containing 3937 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sticherus bifidus (Willd.) Ching"
 ]
}

 The dataset includes 3937 records from 220 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0314360-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhdbaq
title: Occurrence Download

description: A dataset containing 284 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Donax carinatus Hanley, 1843"
 ]
}

 The dataset includes 284 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002173-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-05.3103803/2344914
title: Data for EMSL Project 60929 from May 2024
DOI: 10.15468/dl.j6dgzw
title: Occurrence Download

description: A dataset containing 3936 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sticherus bifidus (Willd.) Ching"
 ]
}

 The dataset includes 3936 records from 219 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0314364-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.suawn8
title: Occurrence Download

description: A dataset containing 23471 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Herbier Louis-Marie (QFA) - Collection de lichens"
 ]
}

 The dataset includes 23471 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037950-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25829/n4dpw4
title: Forest cover loss for Finland (e-shape, 0.0025 degrees)

description: This EBV dataset is based completely on the time series analysis produced by Hansen et al., (2013) in the version 1.8, which examines the global Landsat archive at a special resolution of 30 meters to characterize global forest extent and change from 2000 trough 2020. In this EBV dataset we focus on "Forest Cover loss" defined as a stand-replacement disturbance, or a change from a forest to non-forest state. The original data from Hansen et al., (2013), was processed using a factor of 10 to aggregate to a new spatial resolution of 300 x 300 meters and are structured in the multidimensional and standard format proposed by the GEO BON community for the Essential Biodiversity Variables.
DOI: 10.15468/dl.uhhxum
title: Occurrence Download

description: A dataset containing 207 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lophophora diffusa (Croizat) Bravo"
 ]
}

 The dataset includes 207 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037951-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25829/fnm5w9
title: Forest cover loss for Finland (e-shape, 0.00075 degrees)

description: This EBV dataset is based completely on the time series analysis produced by Hansen et al., (2013) in the version 1.8, which examines the global Landsat archive at a special resolution of 30 meters to characterize global forest extent and change from 2000 trough 2020. In this EBV dataset we focus on "Forest Cover loss" defined as a stand-replacement disturbance, or a change from a forest to non-forest state. The original data from Hansen et al., (2013), was processed using a factor of 3 to aggregate to a new spatial resolution of 90 x 90 meters and are structured in the multidimensional and standard format proposed by the GEO BON community for the Essential Biodiversity Variables.
DOI: 10.25829/zn5y29
title: Predicted suitability for EUNIS habitat types (100m resolution) for EU27 countries

description: The modelled suitability for some of the EUNIS terrestrial habitat types is an indication of where conditions are favorable for each habitat type based on classified sample plot data European Vegetation Archive (EVA), predictors, and the Maxent software package (https://biodiversityinformatics.amnh.org/open_source/maxent/). The modelled suitability maps may be used as a proxy for the potential geographical distribution of the habitat types in given environmental and climatic envelopes. Note however that the suitability is not representing the actual distribution of the habitat types. Currently for one time period (2010-2014) models have been created. For each period different versions for some of the predictors have been applied (LAI, LULC, Phenology, Population density). Climate, soil and topography predictors are the same for the two periods. In Maxent the models have been ran using the predictors for the second period for the future predictions.
DOI: 10.15468/dl.nfyjzz
title: Occurrence Download

description: A dataset containing 357 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is November",
 "TaxonKey is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 357 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037952-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13881235
title: Raw_data_Morphological and physiological impact of humic substances on tomato growth under both non-stress and osmotic stress conditions
DOI: 10.5281/zenodo.13881236
title: Raw_data_Morphological and physiological impact of humic substances on tomato growth under both non-stress and osmotic stress conditions
DOI: 10.6084/m9.figshare.25673799
title: A comparison of Human, GPT-3.5, and GPT-4 Performance in a University-Level Coding Course

description: Data from "A comparison of Human, GPT-3.5, and GPT-4 Performance in a University-Level Coding Course". <br><br>This study evaluates the performance of ChatGPT variants, GPT-3.5 and GPT-4, both with and without prompt engineering, against solely student work and a mixed category containing both student and GPT-4 contributions in university-level physics coding assignments using the Python language. Comparing 50 student submissions to 50 AI-generated submissions across different categories, and marked blindly by three independent markers, we amassed n = 300 data points. Students averaged 91.9% (SE:0.4), surpassing the highest performing AI submission category, GPT-4 with prompt engineering, which scored 81.1% (SE:0.8) - a statistically significant difference (p = 2.482 x 10<sup>-10</sup>). Prompt engineering significantly improved scores for both GPT-4 (p = 1.661 x 10<sup>-4</sup>) and GPT-3.5 (p = 4.967 x 10<sup>-9</sup>). Additionally, the blinded markers were tasked with guessing the authorship of the submissions on a four-point Likert scale from `Definitely AI' to `Definitely Human'. They accurately identified the authorship, with 92.1% of the work categorized as 'Definitely Human' being human-authored. Simplifying this to a binary `AI' or `Human' categorization resulted in an average accuracy rate of 85.3%. These findings suggest that while AI-generated work closely approaches the quality of university students' work, it often remains detectable by human evaluators.
DOI: 10.6084/m9.figshare.25673799.v3
title: A comparison of Human, GPT-3.5, and GPT-4 Performance in a University-Level Coding Course

description: Data from "A comparison of Human, GPT-3.5, and GPT-4 Performance in a University-Level Coding Course". <br><br>This study evaluates the performance of ChatGPT variants, GPT-3.5 and GPT-4, both with and without prompt engineering, against solely student work and a mixed category containing both student and GPT-4 contributions in university-level physics coding assignments using the Python language. Comparing 50 student submissions to 50 AI-generated submissions across different categories, and marked blindly by three independent markers, we amassed n = 300 data points. Students averaged 91.9% (SE:0.4), surpassing the highest performing AI submission category, GPT-4 with prompt engineering, which scored 81.1% (SE:0.8) - a statistically significant difference (p = 2.482 x 10<sup>-10</sup>). Prompt engineering significantly improved scores for both GPT-4 (p = 1.661 x 10<sup>-4</sup>) and GPT-3.5 (p = 4.967 x 10<sup>-9</sup>). Additionally, the blinded markers were tasked with guessing the authorship of the submissions on a four-point Likert scale from `Definitely AI' to `Definitely Human'. They accurately identified the authorship, with 92.1% of the work categorized as 'Definitely Human' being human-authored. Simplifying this to a binary `AI' or `Human' categorization resulted in an average accuracy rate of 85.3%. These findings suggest that while AI-generated work closely approaches the quality of university students' work, it often remains detectable by human evaluators.
DOI: 10.15468/dl.7bxsvh
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acer sosnowskyi Doluch."
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037953-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.8344050
title: Example input and output for RSYD-BASIC pipeline

description: <strong>Input data:</strong> 20230914-data-overview.xlsx: mapping of placeholder sample numbers to original SRA accession numbers 1199234567-*.fastq.gz: renamed Illumina MiSeq reads; reads for 1199234567-5 have been obtained by downsampling SRR10955980 madsdata: LIS report and bacteria list used for LIS-specific results <strong>Expected results:</strong> Results of the RSYD-BASIC pipeline, version 1.8.0, with the test dataset
description: {"references": ["Fursova NK, Astashkin EI, Ershova ON, Aleksandrova IA, Savin IA, Novikova TS, et al. Multidrug-Resistant Klebsiella pneumoniae Causing Severe Infections in the Neuro-ICU. Antibiotics (Basel). 2021 August 13", "Jansson M\u00f6rk M, Karamehmedovic N, Hansen A, Nederby \u00d6hd J, Lindblad M, \u00d6stlund E, et al. Outbreak of Salmonella Newport linked to imported frozen cooked crayfish in dill brine, Sweden, July to November 2019. Eurosurveillance. 2022 June: p. 2.", "Wang LYR, Jokinen CC, Laing CR, Johnson RP, Ziebell K, Gannon VPJ. Assessing the genomic relatedness and evolutionary rates of persistent verotoxigenic Escherichia coli serotypes within a closed beef herd in Canada. Microbial Genomics. 2020 June 3: p. e000376.", "Spanelova P, Jakubu V, Malisova L, Musilek M, Kozakova J, Papagiannitsis CC, et al. Whole genome sequencing of macrolide resistant Streptococcus pneumoniae serotype 19A sequence type 416. BMC Microbiology. 2020 July 25."]}
DOI: 10.5281/zenodo.13881353
title: Example input and output for RSYD-BASIC pipeline

description: Input data:



20230914-data-overview.xlsx: mapping of placeholder sample numbers to original SRA accession numbers

1199234567-*.fastq.gz: renamed Illumina MiSeq reads; reads for 1199234567-5 have been obtained by downsampling SRR10955980

madsdata: LIS report and bacteria list used for LIS-specific results


Expected results:



Results of the RSYD-BASIC pipeline, version 1.15.1, with the test dataset
DOI: 10.5281/zenodo.8344049
title: Example input and output for RSYD-BASIC pipeline

description: Input data:



20230914-data-overview.xlsx: mapping of placeholder sample numbers to original SRA accession numbers

1199234567-*.fastq.gz: renamed Illumina MiSeq reads; reads for 1199234567-5 have been obtained by downsampling SRR10955980

madsdata: LIS report and bacteria list used for LIS-specific results


Expected results:



Results of the RSYD-BASIC pipeline, version 1.15.1, with the test dataset
DOI: 10.5281/zenodo.13881372
title: Ecotoxicants within the maximum permissible concentration affect clinical and laboratory parameters of patients with rheumatoid arthritis and individuals at risk at preclinical stages
DOI: 10.5281/zenodo.13881373
title: Ecotoxicants within the maximum permissible concentration affect clinical and laboratory parameters of patients with rheumatoid arthritis and individuals at risk at preclinical stages
DOI: 10.15468/dl.z75e3r
title: Occurrence Download

description: A dataset containing 219 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-16.09653 28.59739,-16.37268 28.66846,-16.63259 28.51414,-16.99606 28.36794,-16.87626 27.99229,-16.55949 27.95574,-16.3869 28.04509,-16.09653 28.36997,-16.09653 28.59739))",
 "TaxonKey is Eschscholzia californica Cham."
 ]
}

 The dataset includes 219 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037954-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.