cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16803235.v1
title: A microRNA cluster controls fat cell differentiation and adipose tissue expansion by regulating SNCG

description: We present here lipidomic data from subcutaneous adipose tissue from 20 miR-KO mice and Wt controls under normal chow (1:1, male/females) (5 animals/experimental condition). Prior to lipid extraction, fat samples were spiked with internal standards and solvent of standards was removed by vacuum centrifugation. Then, samples were homogenized with a Precellys® 24 tissue homogenizer (Bertin Instruments). Homogenates containing a wet weight of 2 mg were extracted according to the protocol described by Bligh and Dyer. The analysis of lipids was performed by direct flow injection analysis (FIA), using either a triple quadrupole mass spectrometer (QQQ; FIA-MS/MS) or a hybrid quadrupole-Orbitrap high-resolution mass spectrometer (FIA-FTMS). Both instruments were equipped with a heated electrospray ionization source. FIA-MS/MS (QQQ) was performed in positive ion mode. The following neutral losses were applied: PE, 141 and PI, 277. PE-based plasmalogens (PE P) were analyzed according to the principles described by Berry and colleagues. Sphingosine-based Cer were analyzed using a fragment ion of <i>m/z</i> 264. Correction for isotopic overlap of lipid species was performed for all lipid classes. TG and DG were recorded in positive ion mode as [M+NH<sub>4</sub>]<sup>+</sup> in <i>m/z</i> range 500–1000 and a target resolution of 140,000 (at <i>m/z</i> 200). PC and SM were analyzed as [M+HCOO]<sup>-</sup> in negative ion mode in <i>m/z</i> range 520–960 at the same resolution setting. Peak assignment was performed with the ALEX software and applied a mass accuracy of less than 3 ppm. Quantification was achieved by multiplication of the spiked-in IS amount with the analyte-to-IS intensity ratio. The following lipid species were applied as internal standards: Cer 18:1;O2/14:0, Cer 18:1;O2/17:0, DG 14:0/14:0/0:0, DG 20:0/20:0/0:0, HexCer 18:1;O2/12:0, HexCer 18:1;O2/17:0, LPC 13:0/0:0, LPC 19:0/0:0, PC 14:0/14:0, PC 22:0/22:0, PE 14:0/14:0, PE 20:0/20:0, PI 17:0/17:0, SM 18:1;O2/12:0, TG 17:0/17:0/17:0, and TG 19:0/19:0/19:0. Extracted data were processed by self-programmed Macros.
DOI: 10.6073/pasta/200f3dd1a51010ff07ad5222c8c3399d
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 6 meteorological station: 1-hour summary data: 2017 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-6 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.6073/pasta/2bf708d3bd2132e8d30cb29a62cf80bb
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 6 meteorological station: Daily summary data: 2013 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-6 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.17632/bgkxcmjcb5.1
title: Dataset on the Measurement of College Student Entrepreneurship Skills in Indonesia

description: This dataset is used to develop student college entrepreneurship skills instrument. Data analysis was carried out by measuring the quality and practicality of the instrument through various analyzes, namely Content validation using the Aiken V Index, Construct Validity using Exploratory Factor Analysis (EFA) and Confirmatory Factor Analysis (CFA), Reliability using Crobanch's Alpha, and Practicality Testing using measurement instruments.
DOI: 10.17632/t3mhc497c2.2
title: Downhill varices extracted variables from case reports 

description: Data
DOI: 10.17632/j4bdp9zc4b.1
title: Ming Huang

description: Initial gromacs structure files, force field parameters files and corresponding gromacs configuration files. Using all this can reproduce the data
DOI: 10.17632/yxznmcjgnk.1
title: Supplementary Materials: "Solvent Extraction Systems Affect Obtained Phytochemical Components and Antioxidant and Anticancer Activities of Derris indica"

description: In this paper, we report on the Solvent Extraction Systems Affect Obtained Phytochemical Components and Antioxidant and Anticancer Activities of Derris indica Leaf, Flower, Fruit, Twig and Bark existing various of secondary metabolites in several parts. This research is interesting because D. indica is a medicinal plant that is used to treat and has a wide range of pharmacological effects. It is an adaptive mangrove plant in highly variability conditions, and the highlight of this work is that the studied data can be analyzed with statistical programs and know which part of the plant and solvents can provide a good essence or active ingredient. This information will be knowledgeable to further the application of the plant in various fields for benefits such as medical, food industry or pharmaceuticals.

Supplementary Materials: See attached files below;
DOI: 10.25721/dmf6-xx81
title: Bourrée
DOI: 10.17632/b699cjwppn.1
title: Dear-enemy effect between two sympatric bird species

description: In this study I investigated the occurrence of the dear-enemy effect in territorial interactions between two non-passerine bird species: water rail (Rallus aquaticus) and little crake (Zapornia parva). I used a cross-species playback experiment where water rails received calls of strangers and neighbouring little crakes, while little crakes received calls of water rails in the same manner. In addition, each focal pair was exposed to control calls of little grebes (Tachybaptus ruficollis). During the treatments, it did happen that either a neighbour of another species imitated by us or an individual of the same species called from adjacent territories. However, since each pair received a long series of playbacks, we could isolate responses to such unexpected events from responses to playbacks. If an additional bird responded during the procedure, we only considered the reactions up to that point for all three treatments with a given pair. Data included in the database (approaches, time near speaker, total number of calls) present, therefore, such isolated responses that were later analysed. See article "Dear-enemy effect between two sympatric bird species" for more details.
DOI: 10.6084/m9.figshare.16803484
title: FindingNemo_WallE_article_datafile.docx

description: Coding frames for the study's qualitative content analysis of two films and in-depth interviews with ten participants.
DOI: 10.17632/yj57tb7zzk.1
title: DIB-D-21-01392 (Data on Connexin 43 Hemichannels Regulation of Cellular Redox in Lens)

description: Raw dataset (supplementary data)
DOI: 10.6084/m9.figshare.16803484.v1
title: FindingNemo_WallE_article_datafile.docx

description: Coding frames for the study's qualitative content analysis of two films and in-depth interviews with ten participants.
DOI: 10.17632/ckmv49nt4x.1
title: Data for: Protein lactylation induced by neural excitation

description: Microscopy images used in this study
DOI: 10.17632/39sjhchwtx.1
title: Benchmark Frames for Structural Analysis

description: The data provided here were created as part of an extensive study conducted by the contributors. As described in detail in the article titled "Efficient geometric nonlinear elastic analysis for design of steel structures: Benchmark studies" (Journal of Constructional Steel Research, 186, doi: 10.1016/j.jcsr.2021.106870), a set of twenty-two planar benchmark frames was compiled in order to validate a proposed finite element-based approximate method of second-order elastic analysis. The frames offer a broad range of two-dimensional geometries and stability sensitivities, with critical buckling load ratios ranging from 1.2 - 7.9. 

These benchmark frames are useful for studying structural design and analysis methods. 

The data and supplementary information include:
  1.  Frame descriptions (PDF file): geometry, member sizes, and loading details for each of the 22 benchmark frames
  2.  Finite element models (MASTAN2 files) of benchmark frames: both perfect and imperfect geometries (with global sway)
  3.  Finite element model data (Excel file) for each frame – both perfect and imperfect geometries; This includes node coordinates and element conductivity etc. useful for creating frame models with any FEA program.
  4.  Simulation results: (a) Joint displacements and member design moments for each benchmark frame as determined by 3 different analyses; (b) Critical buckling load ratio of each frame.

MASTAN2 software can be downloaded for free at http://mastan2.com/.
DOI: 10.17632/2kzwtm4nwc.2
title: Sample of porous material with an ordered arrangement of cavities

description: The model of porous material intended for printing on a 3D printer is presented. This sample has a size of 100x100x100 mm and consists of 8000 cubic cells with an edge of 5 mm and cavities inside the size of 3 mm. The effective thermal conductivity of this porous material is 0.1678 W/mC.
DOI: 10.5281/zenodo.5213786
title: Raw Research Data Supporting "Generalizing hydrogel microparticles into a new class of bioinks for extrusion bioprinting"

description: Raw research data supporting: Xin S. et al., 2021, Science Advances, Vol 7, Issue 42, abk3087
DOI: 10.5281/zenodo.5213785
title: Raw Research Data Supporting "Generalizing hydrogel microparticles into a new class of bioinks for extrusion bioprinting"

description: Raw research data supporting: Xin S. et al., 2021, Science Advances, Vol 7, Issue 42, abk3087
DOI: 10.17632/wcp8wrdhyj.1
title: Temperature change in cold rolling simulation

description: This dataset contains the surface temperature change in a specimen in cold rolling due to plastic deformation. These output values are tabulated in relation to material properties, workpiece dimensions, friction, roller height, and feed velocity.
DOI: 10.5281/zenodo.5566903
title: Prenatal skeletogenesis partially recovers from absent skeletal muscle as development progresses

description: Raw data (measurements made) for paper entitled "Prenatal skeletogenesis partially recovers from absent skeletal muscle as development progresses"
DOI: 10.5281/zenodo.5566902
title: Prenatal skeletogenesis partially recovers from absent skeletal muscle as development progresses

description: Raw data (measurements made) for paper entitled "Prenatal skeletogenesis partially recovers from absent skeletal muscle as development progresses"
DOI: 10.6073/pasta/99b03167e6daf96209d359c02df3842e
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 10 meteorological station: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data at 10 cm at CSIS Block-10. Collection of soil volumetric water content data at Jornada LTER Cross-scale Interactions Study (CSIS) blocks, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Soil volumetric water content is measured at 10 cm depth at 3 locations at each of the 4 plots per block. The locations in each plot are under bare soil, under perennial grass, and under shrub. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are recorded every 30 minutes at an automated meteorological station installed at Jornada LTER CSIS Block-10 site. This is an ONGOING dataset.
DOI: 10.17632/v7kpn27c4t.1
title: Cardiac metabolism in mice treated with FGF1 and CHIR

description: This data set includes the abundance of metabolites sample using Targeted Liquid Chromatography Tandem Mass Spectrometry. Both the positive and negative ionization mode were used for the metabolites detection.
DOI: 10.17632/tcs9wmdht7.5
title: Postmortem investigation of Onnagawa shale by X-ray computed tomography

description: These data were collected by deforming a sample in a high-pressure gas rig and performing a post mortem analysis in a commercially available X-ray CT scanner. An overview of the data is provided in the README.dox file.
DOI: 10.17632/tcd68zdf49.1
title: Proteomics of HTR8 cells with bile acids and EBSS treatment

description:    HTR8 cells maintained in Earle's balanced salt solution (EBSS) and treated with 100 μM chenodeoxycholic acid (CDCA) or 100 μM deoxycholic acid (DCA) for 18 h were subjected to proteomic analysis 
    
After treatment with bile acids (CDCA or DCA) and EBSS, HTR8 cells (two duplicates in each group) were harvested and lysed. The protein lysates of HTR8 cells were digested with trypsin (Promega, Madison, WA, USA). The resulting peptide in each sample was then labeled using a Tandem Mass Tags (TMT) Labeling kit (ThermoFisher Scientific) following the manufacturer’s instructions and fractionated by reverse-phase chromatography using high-performance liquid chromatography (1260 Infinity II; Agilent, USA). Liquid chromatography (LC)-mass spectrometry (MS)/MS analysis was performed on a mass spectrometer (positive ion mode; Q Exactive Plus; ThermoFisher Scientific) coupled with a nanoflow LC system (Easy-nLC; ThermoFisher Scientific). MS data were acquired and processed using MASCOT (version 2.6; Matrix Science, London, UK) embedded into Proteome Discoverer 2.2. Proteins with fold changes higher than 1.2 or less than 0.83 and p values less than 0.05 were considered as differentially expressed.
DOI: 10.17632/8sw4hpnm39.1
title: Remodeling of the Fatty Acid Moiety of Ganglioside GM1 Reveals its Cholesterol Biosynthesis Regulation Mechanism Through ERBB4-Activated SREBP2 Up-regulation in Neuro2a Cells

description: Remodeling of the Fatty Acid Moiety of Ganglioside GM1 Reveals its Cholesterol Biosynthesis Regulation Mechanism Through ERBB4-Activated SREBP2 Up-regulation in Neuro2a Cells
DOI: 10.17632/34wfxc9538.1
title: Newspaper Articles 1985-2015

description: Considering the inherently dynamic nature of labour market, change has always been an inseparable aspect of career studies. This qualitative study aims to look at the representation of this change in selected British newspapers to determine the extent to which the public discourse narratives conform with the traditional and modern dichotomy described in the career literature and how motifs of transformation and alteration are used to narrate the career stories. 
In particular, I will present a qualitative content analysis of the British newspaper articles published in the Times, the Guardian and the Daily Mail between 1985 to 2005 which particularly address the change in the structure of careers with the aim of identifying how popular opinions and academic discourse overlap, diverge and feed into one another. 
In this study, I will try to answer the question of how the language and discourse used by the journalists adds to or influence the presumptions about traditional and modern careers and how public discourse represent the transformation in structure of careers. In a wider sense, looking at the representation of change in structure of careers can also help us to see the role of print media in reproducing or challenging the notions of dominance in labour market and society as result of the neo-liberal political, economic and business reforms of the 1980s and 1990s.
DOI: 10.17632/js9d5cb8w2.2
title: Long noncoding RNA glycoLINC assembles a lower glycolytic complex to promote glycolysis

description: Non-covalent complexes of glycolytic enzymes termed metabolons were postulated in the 1970s, but the concept has been controversial. Here we show that a c-Myc-responsive long noncoding RNA (lncRNA) that we name glycoLINC (gLINC) acts as a backbone for metabolon formation between all four glycolytic pay-off phase enzymes (PGK1, PGAM1, ENO1 and PKM2) along with LDHA. The gLINC metabolon enhances glycolytic flux, increases ATP production and enables cell survival under serine deprivation. Furthermore, gLINC overexpression in cancer cells promotes xenograft growth in mice fed a diet deprived of serine, suggesting that cancer cells employ gLINC during metabolic reprogramming. This proposes that gLINC makes a functional contribution to cancer cell adaptation and moreover, provides the first example of a lncRNA-facilitated metabolon.
DOI: 10.17632/csv8nvy7dr.1
title: Information maintenance of food sources is associated with environment, spatial cognition and age in a food-caching bird

description: These data were analyzed to explore to what extent information updating behaviors (i.e. sampling) may depend on environmental predictability (see Benedict et al. in Animal Behaviour). We tested this hypothesis by allowing wild food-caching mountain chickadees, Poecile gambeli, to visit and sample multiple feeders with temporarily stable, unlimited food for five consecutive winters. We used an index of feeder use breadth to explore how feeder visits across multiple feeders varied with environmental conditions. Each feeder visit is associated with information updating, and more information maintenance should be associated with distributing more visits across more feeders. While controlling for the total number of visits by each individual, we found that (1) chickadees redistributed  feeder use among more feeders when environmental conditions were harsh and unpredictable, (2) juveniles had a higher feeder use breadth than adults, and individuals reduced their feeder use breadth as they aged, (3) better spatial learning and memory ability but not spatial cognitive flexibility was associated with smaller feeder use breadth and (4) learning associated with decreased food availability reduced subsequent feeder use breadth. Our data supported our predictions that factors affecting the predictability of resource information (environmental conditions and individual characteristics such as cognition and age) affect how individuals engage in information maintenance.

The dataset is comprised of several types of data collected from 2015-2020. Behavioral data were collected in Sagehen Experimental Forest using radiofrequency identification (RFID)-equipped 'smart' feeders arranged in spatial arrays to allow for spatial learning and memory testing (Croston et al. 2015). These feeders allowed for detection of passive integrated transponder (PIT)-tagged chickadees foraging at the feeders. These behavioral data were collected during annual winter data collection periods and were summarized by the Levins' measure (i.e. the inverse of the Simpson's diversity index; Levins 1968). The Levins' measure uses proportion of visits to 8 feeders in a given array to estimate feeder use breadth and provide a metric of information maintenance. The dataset also includes (1) demographic data (age, sex) from long-term banding efforts in the study system, (2) cognitive data (spatial learning and memory ability, single reversal learning ability), and environmental data (from nearby California SNOTEL stations #539, #540, and #541).

Feeder design by Eli S. Bridge & Vladimir V. Pravosudov: Bridge, E.S., & Bonter, D.N. (2011). A low-cost radio frequency identification device for ornithological research. Journal of Field Ornithology, 82, 52–59. https://doi.org/10.1111/j.1557-9263.2010.00307.x
DOI: 10.17632/f4r5by77wm.1
title: Health state utility valuations in relation to the Dermatology Life Quality Index

description: These data were collected for our empirical research about the utility valuation of skin disease-related health states. The data were collected through an online survey to which respondents were recruited from the adult general population of Hungary. The sample was selected by non-probabilistic quota sampling, and it is representative of the adult general population of Hungary in terms of main demographic characteristics. Data collection and the research was funded by the Ministry for Innovation and Technology of Hungary conjointly with Corvinus University of Budapest.

The data set contains the data of n=2001 participants, who were asked to provide time trade-off (TTO) utility valuations concerning hypothetical, dermatologically relevant health states. Participants were randomly assigned to one of 18 experimental conditions (‘random blocks’) determining the health states to be valuated. Each random block contained five health states, which were presented to participants in randomized order. Health states were described in terms of their skin disease-related negative impacts on life quality, corresponding to specific combinations of severity levels according to the Dermatology Life Quality Index (DLQI) scale.

As for the TTO valuation task, participants were asked to imagine having a remaining lifespan of ten years, which they were to live in a given hypothetical health state. Then they had to indicate how many of these ten years they would be willing to give up in exchange for regaining perfect health for the rest of their lives. There were 21 response categories ranging from 0 to 10 years by half-year increments. [0–1] utility values (y) were calculated for each response according to the formula y=1-t/10, whereby t was the individuals’s choice in the TTO valuation task, i.e. the number of years he/she would be willing to trade off for perfect health.

The primary objective of the research was to investigate how health state utility valuations were related to scores on the ten items of the DLQI scale.
DOI: 10.6073/pasta/f07792875476db0346bf98c16d7e8470
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 10 meteorological station: Daily summary data: 2013 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-10 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. The met station variables measured include air temperature, precipitation, relative humidity, wind direction, wind speed. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.