cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23741884
title: Racism and the Constitution of an Ideological Sign of Resistence

description: ABSTRACT This article aims to understand the dissemination and consolidation of an ideological sign of resistance, starting with the analysis of a verbal-visual utterance, a photo reportage published in the Portuguese newspaper Expresso. That reportage, through a series of photographs and a brief text, shows a demonstration in Lisbon, in June 2020, against the murder of George Floyd, by police officers, in the USA. The Dialogical Discourse Analysis, grounded in the work of Mikhail Bakhtin and the Circle, is the theoretical and methodological basis for this article, which mobilizes the notions of ideological sign and dialogic relations. Starting with one of the photos referred to in the title of the reportage, the analysis raised meanings produced in the various axiological dialogues among spatially and temporally distinct statements, using words, images, and gestures shared during the protest demonstrations. The dialogic chains of statements show how a discourse of resistance to racism and other social inequalities is constituted, and expressed in an ideological sign.
DOI: 10.6084/m9.figshare.23741884.v1
title: Racism and the Constitution of an Ideological Sign of Resistence

description: ABSTRACT This article aims to understand the dissemination and consolidation of an ideological sign of resistance, starting with the analysis of a verbal-visual utterance, a photo reportage published in the Portuguese newspaper Expresso. That reportage, through a series of photographs and a brief text, shows a demonstration in Lisbon, in June 2020, against the murder of George Floyd, by police officers, in the USA. The Dialogical Discourse Analysis, grounded in the work of Mikhail Bakhtin and the Circle, is the theoretical and methodological basis for this article, which mobilizes the notions of ideological sign and dialogic relations. Starting with one of the photos referred to in the title of the reportage, the analysis raised meanings produced in the various axiological dialogues among spatially and temporally distinct statements, using words, images, and gestures shared during the protest demonstrations. The dialogic chains of statements show how a discourse of resistance to racism and other social inequalities is constituted, and expressed in an ideological sign.
DOI: 10.6084/m9.figshare.23741883
title: TRAIN FROM KITENGELA TO NAIROBI LOCATION 1.csv

description: This is vibration data in excel sheet .
DOI: 10.25375/uct.23737179
title: Tandem catalytic transformation of linear alkanes to high value aldehydes using Cytochrome P450 enzymes and biofabricated Palladium-Gold nanocatalysts

description: The aim of this study was to investigate the feasibility of converting alkanes to aldehydes using two separate reaction vessels through the successful integration of the activation and valorisation stages, using <em>n</em>-octane as the model substrate. Bioactivation via whole cell CYP153A6 enzyme catalysis was adopted for the activation step and biofabricated palladium-gold nanocatalysts for the valorisation step. <br> Cytochrome P450 (CYP) enzymes are distinguished for their ability to catalyse alkane reactions with high specificity and selectivity (&gt; 95 %). The data presents results affirming the unmatched capability of the CYP153A6 enzyme to terminally activate <em>n</em>-octane with 1-octanol product selectivity reaching as high as 97 % at near ambient conditions. <br> The data also includes results for the synthesis of two monometallic catalysts comprised of either 5 wt% Pd, or 5 wt% Au, and a bimetallic catalyst containing 2.5 wt% Pd and 2.5 wt% Au biofabricated using <em>Escherichia coli</em> (<em>E. coli</em>) MC4100 in a two-step biosorption and bioreduction process, as well as characterisation of the nanocatalysts using electron microscopy, X-ray diffraction, ICP-OES multi-element analyses. <br> The catalytic activity of the nanocatalysts were tested using oxidation reactions of benzyl alcohol and 1-octanol in two different oxidants, with and without neutral solvent, before proceeding to oxidation reactions of 1-octanol. The versatility of the biofabricated nanocatalysts in C-C and C-H bond transformations was also tested using the <em>n</em>-octane activation reaction. <br> The CYP-catalysed activation of <em>n</em>-octane was subsequently repeated in the presence of the bimetallic Pd/Au catalyst (chemo-catalyst) to test the biocompatibility of the biocatalyst and chemocatalyst in a first known attempt at tandem catalysis to both activate and valorise <em>n</em>-alkane in a one-pot system. The data results show that there is potential in using CYP enzymes in tandem with a biofabricated Pd/Au nanocatalyst for the transformation of aliphatic hydrocarbons to aldehydes.
DOI: 10.25375/uct.23737179.v1
title: Tandem catalytic transformation of linear alkanes to high value aldehydes using Cytochrome P450 enzymes and biofabricated Palladium-Gold nanocatalysts

description: The aim of this study was to investigate the feasibility of converting alkanes to aldehydes using two separate reaction vessels through the successful integration of the activation and valorisation stages, using <em>n</em>-octane as the model substrate. Bioactivation via whole cell CYP153A6 enzyme catalysis was adopted for the activation step and biofabricated palladium-gold nanocatalysts for the valorisation step. <br> Cytochrome P450 (CYP) enzymes are distinguished for their ability to catalyse alkane reactions with high specificity and selectivity (&gt; 95 %). The data presents results affirming the unmatched capability of the CYP153A6 enzyme to terminally activate <em>n</em>-octane with 1-octanol product selectivity reaching as high as 97 % at near ambient conditions. <br> The data also includes results for the synthesis of two monometallic catalysts comprised of either 5 wt% Pd, or 5 wt% Au, and a bimetallic catalyst containing 2.5 wt% Pd and 2.5 wt% Au biofabricated using <em>Escherichia coli</em> (<em>E. coli</em>) MC4100 in a two-step biosorption and bioreduction process, as well as characterisation of the nanocatalysts using electron microscopy, X-ray diffraction, ICP-OES multi-element analyses. <br> The catalytic activity of the nanocatalysts were tested using oxidation reactions of benzyl alcohol and 1-octanol in two different oxidants, with and without neutral solvent, before proceeding to oxidation reactions of 1-octanol. The versatility of the biofabricated nanocatalysts in C-C and C-H bond transformations was also tested using the <em>n</em>-octane activation reaction. <br> The CYP-catalysed activation of <em>n</em>-octane was subsequently repeated in the presence of the bimetallic Pd/Au catalyst (chemo-catalyst) to test the biocompatibility of the biocatalyst and chemocatalyst in a first known attempt at tandem catalysis to both activate and valorise <em>n</em>-alkane in a one-pot system. The data results show that there is potential in using CYP enzymes in tandem with a biofabricated Pd/Au nanocatalyst for the transformation of aliphatic hydrocarbons to aldehydes.
DOI: 10.21227/9mx5-fw91
title: Spectrum dataset at different positions with different magnitudes of forces

description: 1.The spectrum of the dataset is obtained by applying force to the tactile sensor based on Chirped Bragg gratings.2.The applied force ranges from 0N to 10N on the sensing pad of 4cm×4cm.3.The folder name (x, y) represents the specific coordinates of the point at which the force is applied, and the xN name of the subfolder represents the xN force applied at that point.4.A total of 120 spectral data were collected in each applied force state.5.The first column of each spectrum is wavelength and the second column is intensity.6.The size of each spectrum is (509, 1).
DOI: 10.18712/nsd-nsd3122-v1
title: Democratic Urban Development in the Digital Age (DEMUDIG)

description: The data was collected in connection with the DEMUDIG project which lasted from 01.07.2018-31.03.2022. The project compared citizen participation in urban development in Oslo, Madrid and Melbourne. The project was about participation and involvement, and studied how citizens and other stakeholders engaged and what the authorities did to obtain input from the population. It focused specifically on participation via websites, apps and social media. The project was also concerned with what happens to the input when the participation process is completed, and the policy is to be implemented.
DOI: 10.6084/m9.figshare.23741886
title: TRAIN FROM MOMBASA TO NAIROBI LOCATION 1.csv

description: This is vibration data in excel for location 1.
DOI: 10.6084/m9.figshare.22067054
title: Data and Codes for Reinforcement learning establishes a minimal metacognitive process to monitor and control motor learning performance

description: Estimated motor memory during visuomotor learning and codes for simulations
DOI: 10.5281/zenodo.8162744
title: Univariate Partition Functions for Planetary Boundary Layer Schemes at Gray Zone Resolutions

description: This dataset contains the data used in the submitted manuscript of Liu et al. 2023. Please refer to the manuscript for the detailed description of the dataset.
DOI: 10.5281/zenodo.8162743
title: Univariate Partition Functions for Planetary Boundary Layer Schemes at Gray Zone Resolutions

description: This dataset contains the data used in the submitted manuscript of Liu et al. 2023. Please refer to the manuscript for the detailed description of the dataset.
DOI: 10.6084/m9.figshare.23741895
title: TRAIN 1 JN LOCATION 2.xlsx

description: This is acceleration data in excel at location 2.
DOI: 10.6084/m9.figshare.23741901
title: TRAIN 2 JN LOCATION 2.xlsx

description: This is vibration data in excel for location 2.
DOI: 10.6084/m9.figshare.23741901.v1
title: TRAIN 2 JN LOCATION 2.xlsx

description: This is vibration data in excel for location 2.
DOI: 10.5281/zenodo.8175896
title: Doppler lidar wind profiles from Rzecin during POLIMOS 2018

description: This is data set includes Doppler wind lidar quantities which were calculated from measurements performed between May and September 2018 at <em>PolWET </em>site in Rzecin, Poland (52.75°N, 16.30°E, 59 m a.s.l.) of the Poznan University of Life Sciences The system is a Doppler lidar Stream Line (Halo Photonics), which is part of ACTRIS-Cloudnet (Illingworth et al., 2007). The system laser emits at 1.5 μm and the detector is heterodyne using fiber-optic technology. The measurements for this data set consisted of conical scans (VAD) with constant elevation of 70° and 12 equidistant azimuth points performed every 30 min. A more detailed description of the instrument can be found in (Ortiz-Amezcua et al., 2022)
description: {"references": ["Illingworth, A.J.; Hogan, R.J.; O'Connor, E.J.; Bouniol, D.; Brooks, M.E.; Delano\u00eb, J.; Donovan, D.P.; Eastment, J.D.; Gaussiat, N.; Goddard, J.W.F.; et al. Cloudnet: Continuous evaluation of cloud profiles in seven operational models using ground-based observations. Bull. Am. Meteorol. Soc. 2007, 88, 883\u2013898", "Ortiz-Amezcua, P. And\u00fajar-Maqueda, J., Manninen, A.J., Pentik\u00e4inen, P. O'Connor, E.J., Stachlewska, I.S., de Arruda Moreira, G., Benavent-Oltra, J.A., Casquero-Vera, J.A., Poczta, P., Wang, D., Harenda, K.M., Chojnicki, B.H., Szczepanik, D.M., Janicka, \u0141., Sch\u00fcttemeyer, D., Alados-Arboledas, L., Guerrero-Rascado, J.L.: Dynamics of the Atmospheric Boundary Layer over two middle-latitude rural sites with Doppler lidar, Atmospheric Research, 280, 106434, https://doi.org/10.1016/j.atmosres.2022.106434, 2022"]}
DOI: 10.5281/zenodo.8175895
title: Doppler lidar wind profiles from Rzecin during POLIMOS 2018

description: This is data set includes Doppler wind lidar quantities which were calculated from measurements performed between May and September 2018 at <em>PolWET </em>site in Rzecin, Poland (52.75°N, 16.30°E, 59 m a.s.l.) of the Poznan University of Life Sciences The system is a Doppler lidar Stream Line (Halo Photonics), which is part of ACTRIS-Cloudnet (Illingworth et al., 2007). The system laser emits at 1.5 μm and the detector is heterodyne using fiber-optic technology. The measurements for this data set consisted of conical scans (VAD) with constant elevation of 70° and 12 equidistant azimuth points performed every 30 min. A more detailed description of the instrument can be found in (Ortiz-Amezcua et al., 2022)
description: {"references": ["Illingworth, A.J.; Hogan, R.J.; O'Connor, E.J.; Bouniol, D.; Brooks, M.E.; Delano\u00eb, J.; Donovan, D.P.; Eastment, J.D.; Gaussiat, N.; Goddard, J.W.F.; et al. Cloudnet: Continuous evaluation of cloud profiles in seven operational models using ground-based observations. Bull. Am. Meteorol. Soc. 2007, 88, 883\u2013898", "Ortiz-Amezcua, P. And\u00fajar-Maqueda, J., Manninen, A.J., Pentik\u00e4inen, P. O'Connor, E.J., Stachlewska, I.S., de Arruda Moreira, G., Benavent-Oltra, J.A., Casquero-Vera, J.A., Poczta, P., Wang, D., Harenda, K.M., Chojnicki, B.H., Szczepanik, D.M., Janicka, \u0141., Sch\u00fcttemeyer, D., Alados-Arboledas, L., Guerrero-Rascado, J.L.: Dynamics of the Atmospheric Boundary Layer over two middle-latitude rural sites with Doppler lidar, Atmospheric Research, 280, 106434, https://doi.org/10.1016/j.atmosres.2022.106434, 2022"]}
DOI: 10.5281/zenodo.7996626
title: Supplement to: Early Cretaceous climate for the southern Tethyan Ocean: insights from the geochemical and paleoecological analyses of extinct cephalopods

description: One file (excel) containing XRPD results and Table S1-S6 with details of the clumped isotope, stable carbon isotope, and trace elements analyses that refers to the manuscript.
DOI: 10.5281/zenodo.7668545
title: Supplement to: Early Cretaceous climate for the southern Tethyan Ocean: insights from the geochemical and paleoecological analyses of extinct cephalopods

description: One file (excel) containing XRPD results and Table S1-S6 with details of the clumped isotope, stable carbon isotope, and trace elements analyses that refers to the manuscript.
DOI: 10.13016/dspace/oecj-xlc7
title: Crenshaw transcripts 2023
DOI: 10.6084/m9.figshare.23741910
title: CONSENT TO PARTICIPATE IN RESEARCHUoN PAUL AND ANDERSON.pdf

description: This is a document of informed consent for the research.
DOI: 10.6084/m9.figshare.23741919
title: CONSENT TO PARTICIPATE IN RESEARCHUoN.docx MWANTHI.pdf

description: This is a document of informed consent to participate the research.
DOI: 10.25934/pr00009110
title: Build MIC predictor using genomic data and antibiotic compounds using bacterial isolates

description: The model produced will be able to drive future antimicrobial resistance monitoring by predicting future resistance mechanisms. Doing so will allow hospitals to choose better empirical therapies to improve patient outcomes. The model will also be able to predict new antimicrobial compounds to counter future resistance mechanisms. This would allow for a faster, less cost-intensive way for pharmaceutical companies to develop newer antimicrobial agents.
A proof of concept model has been previously made and published. However, there needs to be more data spanning multiple years, species, and antimicrobials to enhance the model and test other possible architecture improvements that more data could bring.
DOI: 10.17617/4.d0
title: Springback effect of ambient-pressure-dried silica aerogels: Nanoscopic effects of silylation revealed by in-situ synchrotron X-ray scattering

description: Data for the publication with the above-mentioned title. The publication was performed in the context of the following DFG project: How the samples were synthesized can be read here:
DOI: 10.25934/pr00009113
title: Antibiotic Susceptibility in Children in Asia: Evidence from ATLAS Surveillance Study

description: The surging issue of antibiotic resistance, especially in children is a public health threat of utmost importance. WHO reports an estimated death of 200000 newborns due to infections caused by multi drug resistant bacteria. Two-third of the global population live in Asia. It is considered a regional hotspot for development and spread of antimicrobial resistance (AMR). Our goal is to explore susceptibility to drugs of choice for particular infections in children. We aim to determine the antimicrobial profile of the bacterial isolates in children in Asia from the ATLAS surveillance data. Research ethics will be maintained. Data will be processed and analyzed. Findings are planned to be disseminated with recommendations within 2023. These might help in strengthening stewardship and improving patient outcomes.
DOI: 10.25934/pr00009112
title: Comparation Human AMR vs pets in Spain

description: Antimicrobial resistance bacteria risk tranmission has been studied between animals and human. These studies have been made primarily in livestock animals. It has been seen that in LMIC countries, where close contact with livestock is more usual, transmission events are common, showing that AMR is a One Health problem. However, studies done in high  income countries have found that bacteria from livestock is not related with     those from human, probably because animals do not live in the same household.
However, companion animals share space with people and could follow the same pattern than LMIC countries, but they are not studied. 
In our project, we have a dataset with 70000 bacteriological cultures from Spain between 2010 and 2021 from pets and we aim to compare with human results in the same region and period to try to find clusters of bacteria and patterns. This would really help to fill a gap in the One Health knowledge and will suppose an increasing boost of our understanding of AMR tranmission with animals. This would also be the first part of the project, because, depending on the reusults of this first part, we plan to WGS bacteria from pets and human and analyze with phylogenomics techniques the transmission events to fully understand the transmission routes and help to prevent AMR infections.
DOI: 10.5281/zenodo.8158923
title: Mapping the epigenomic landscape of human monocytes following innate immune activation reveals context-specific mechanisms driving endotoxin tolerance

description: <strong>Processed datasets for publication at <em>BMC Genomics</em>.</strong> We exposed human primary monocytes from healthy donors (n=6) to interferon-γ or differing combinations of endotoxin (lipopolysaccharide), including acute response (2hr LPS; LPS2) and two models of endotoxin tolerance: repeated stimulations (6+6hr; LPS6:6) and prolonged exposure to endotoxin (24hr LPS; LPS24). Another subset of monocytes was left untreated (naïve; UT). We performed total RNA-seq and ATAC-seq for monocytes across these treatment conditions. The following processed datasets include the raw and normalised count data for each gene or ATAC peak, and the bedGraph and bigWig format for genome-wide signal data. [ bigWig files for RNA-seq (monocytes_*_mean.bw); bigWig files for ATAC-seq (Monocyte_ATAC_*_mean_normalised.by.1/size.factor.bw); bedgraph files for eRNA visualization (*RPKM_FR.bedgraph.gz); raw and normalised count files for ATAC-seq and RNA-seq data (Monocyte.featureCounts_RNAseq.txt.gz; Monocyte_filtered_log2.normalized_RNAseq_counts.txt.gz; Meta.file.txt.gz; Monocyte_raw.counts_ATACseq.txt.gz.).] <strong>Data curator:</strong> Ping Zhang
DOI: 10.5281/zenodo.8158922
title: Mapping the epigenomic landscape of human monocytes following innate immune activation reveals context-specific mechanisms driving endotoxin tolerance

description: <strong>Processed datasets for publication at <em>BMC Genomics</em>.</strong> We exposed human primary monocytes from healthy donors (n=6) to interferon-γ or differing combinations of endotoxin (lipopolysaccharide), including acute response (2hr LPS; LPS2) and two models of endotoxin tolerance: repeated stimulations (6+6hr; LPS6:6) and prolonged exposure to endotoxin (24hr LPS; LPS24). Another subset of monocytes was left untreated (naïve; UT). We performed total RNA-seq and ATAC-seq for monocytes across these treatment conditions. The following processed datasets include the raw and normalised count data for each gene or ATAC peak, and the bedGraph and bigWig format for genome-wide signal data. [ bigWig files for RNA-seq (monocytes_*_mean.bw); bigWig files for ATAC-seq (Monocyte_ATAC_*_mean_normalised.by.1/size.factor.bw); bedgraph files for eRNA visualization (*RPKM_FR.bedgraph.gz); raw and normalised count files for ATAC-seq and RNA-seq data (Monocyte.featureCounts_RNAseq.txt.gz; Monocyte_filtered_log2.normalized_RNAseq_counts.txt.gz; Meta.file.txt.gz; Monocyte_raw.counts_ATACseq.txt.gz.).] <strong>Data curator:</strong> Ping Zhang
DOI: 10.21227/jwwr-t068
title: Blur Detection for Surveillance Camera Systems: Dataset and Model 

description: Surveillance videos taken in unconstrained environments can be tampered with due to different environmental factors and malicious human activities. They often blur the video content and introduce difficulty in identifying the events in the scene. The problem is particularly acute for smart surveillance systems that need to make real-time decisions based on the video. Automatic detection of the blur anomalies in the video is crucial to these systems. In this research, a learning-based approach for camera blur detection is proposed. The proposed model was trained with a newly constructed image dataset, which contains 17,000 surveillance images with common blur anomalies. All testing images of the dataset were taken from real scenes; they serve as a reference for evaluating the performance of the comparing methods. To fully utilize the abundant positive samples, the proposed model adopted a self-supervised learning method. A color attention module is included based on our observation that some blurry images have a special distribution in their 2-dimensional color histograms. Our experiment results show that the proposed model significantly outperforms state-of-the-art approaches for blur detection while keeping the model size small for edge applications.
DOI: 10.34740/kaggle/dsv/6191399
title: AutoXGB
DOI: 10.5281/zenodo.8181250
title: LumVBCanSeg: A Lumbar Vertebral Body Cancellous Bone Segmentation Dataset

description: To address the lumbar vertebral body cancellous bone segmentation problem, we propose a new dataset called LumVBCanSeg. The entire dataset consists of 185 lumbar CT scans acquired using multiple CT scanners, including the two manufacturers(Philips, Siemens). All data were obtained at ShengJing Hospital of China Medical University. Cases involving vertebral fractures, metal implants, bone tumors and foreign materials were omitted. All data were resampled to an isotropic resolution of 1mm × 1mm × 1mm. Each lumbar 3D CT image has a corresponding segmentation mask annotated at voxel level using the medical image annotation package Pair. Annotations cover five lumbar vertebral body cancellous bones from L1 to L5, with labels ranging from 1 to 5. All annotations were performed by 3 physicians followed by further refinement, dismissal or approval by one physician with more than 30 years of experience in lumbar imaging.
DOI: 10.5281/zenodo.8181249
title: LumVBCanSeg: A Lumbar Vertebral Body Cancellous Bone Segmentation Dataset

description: To address the lumbar vertebral body cancellous bone segmentation problem, we propose a new dataset called LumVBCanSeg. The entire dataset consists of 185 lumbar CT scans acquired using multiple CT scanners, including the two manufacturers(Philips, Siemens). All data were obtained at ShengJing Hospital of China Medical University. Cases involving vertebral fractures, metal implants, bone tumors and foreign materials were omitted. All data were resampled to an isotropic resolution of 1mm × 1mm × 1mm. Each lumbar 3D CT image has a corresponding segmentation mask annotated at voxel level using the medical image annotation package Pair. Annotations cover five lumbar vertebral body cancellous bones from L1 to L5, with labels ranging from 1 to 5. All annotations were performed by 3 physicians followed by further refinement, dismissal or approval by one physician with more than 30 years of experience in lumbar imaging.