cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15151/esrf-es-2170468785
title: Coordinated user access to HTX lab – MASSIF-1 facilities for fragment screening and new structures. With funding through iNEXT Discovery, In

description: This proposal will provide user access to automated protein-to-structure and fragment screening pipelines based on the combination of EMBL HTX lab services and CrystalDirect technology and automated data collection at ESRF’s MX beamlines, within the framework of the EMBL-ESRF JSBG agreement. The access will encompass three key services: 1) Online-Crystallography for Protein-to-Structure analysis, 2) High throughput ligand and Fragment Screening, and 3) innovative Plate-to-beam data collection techniques, made possible by CrystalDirect’s integration at ESRF’s MASSIF1 beamline. Access will be granted through competitive, peer review, as part of EC-funded iNEXT, ISIDORE, CNASERV and Instruct-ERIC consortia. The proposal includes development of new methods to expand the experimental capabilities to perform cutting-edge research in structural biology through furhter integration of CrystalDirect at MASSIF-1 within the framework of international collaborations.
DOI: 10.34740/kaggle/dsv/12027023
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.9ww3nc
title: Occurrence Download

description: A dataset containing 3432967 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Greece",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3432967 records from 1719 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014136-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18378763
title: Processed LFP data for J Kim et al., 2025 bioRxiv

description: Dataset Description

This repository contains the processed intracranial EEG (iEEG) features (Phase-Amplitude Coupling and Spectral Power) and analysis code supporting the J Kim et al., 2025 (https://www.biorxiv.org/content/10.1101/2025.10.15.682151v1.full)

Contents: 

The data is organized into the main folder PACs, which contains the processed features required to reproduce the neural analyses. 

1. Dataset1_No_ICS (Main Cohort, N=21) Processed data for the baseline (non-stimulated) analyses of control flexibility mechanisms.

2. Dataset1_ICS_OFF_ON (Stimulation Cohort, N=6) Processed data for the Internal Capsule Stimulation (ICS) analyses.

Code Usage: 

The included MATLAB script LFP_analyses.m contains the code to reproduce the statistical results reported in the manuscript.

Data Sources:

This dataset contains processed features derived from re-analysis of publicly available raw datasets.

Dataset 1 Raw Data: https://zenodo.org/record/5083120 and https://zenodo.org/record/5085197
DOI: 10.5281/zenodo.18378764
title: Processed LFP data for J Kim et al., 2025 bioRxiv

description: Dataset Description

This repository contains the processed intracranial EEG (iEEG) features (Phase-Amplitude Coupling and Spectral Power) and analysis code supporting the J Kim et al., 2025 (https://www.biorxiv.org/content/10.1101/2025.10.15.682151v1.full)

Contents: 

The data is organized into the main folder PACs, which contains the processed features required to reproduce the neural analyses. 

1. Dataset1_No_ICS (Main Cohort, N=21) Processed data for the baseline (non-stimulated) analyses of control flexibility mechanisms.

2. Dataset1_ICS_OFF_ON (Stimulation Cohort, N=6) Processed data for the Internal Capsule Stimulation (ICS) analyses.

Code Usage: 

The included MATLAB script LFP_analyses.m contains the code to reproduce the statistical results reported in the manuscript.

Data Sources:

This dataset contains processed features derived from re-analysis of publicly available raw datasets.

Dataset 1 Raw Data: https://zenodo.org/record/5083120 and https://zenodo.org/record/5085197
DOI: 10.6084/m9.figshare.31150684
title: <b>Extreme climate impacts on biodiversity and ecosystem services worldwide</b>

description: Global-scale synthesis and meta-analysis of published experimental and observational studies examining biodiversity and ecosystem service responses to extreme climatic events.
DOI: 10.6084/m9.figshare.31150684.v1
title: <b>Extreme climate impacts on biodiversity and ecosystem services worldwide</b>

description: Global-scale synthesis and meta-analysis of published experimental and observational studies examining biodiversity and ecosystem service responses to extreme climatic events.
DOI: 10.6084/m9.figshare.31150684.v2
title: <b>Extreme climate impacts on biodiversity and ecosystem services worldwide</b>

description: Global-scale synthesis and meta-analysis of published experimental and observational studies examining biodiversity and ecosystem service responses to extreme climatic events.
DOI: 10.15468/dl.uyvz3w
title: Occurrence Download

description: A dataset containing 6658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-101.3031 19.44734, -101.1508 19.44823, -101.1522 19.56503, -101.3041 19.56257, -101.3031 19.44734))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6658 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000218-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18378974
title: NHANES
DOI: 10.5281/zenodo.18378973
title: NHANES
DOI: 10.15468/dl.4t63wr
title: Occurrence Download

description: A dataset containing 17541948 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is International Barcode of Life project (iBOL)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arthropoda"
 ]
}

 The dataset includes 17541948 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000198-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uu5k25
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Specimen)",
 "Geometry POLYGON((83.03047 -11.26982,131.72312 -11.26982,131.72312 28.43206,83.03047 28.43206,83.03047 -11.26982))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Urva javanica"
 ]
}

 The dataset includes 144 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000219-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30234850
title: Synthesis of 3,4-Dihydropyrimidin-2(1<i>H</i>)-ones with Moderate Antileukemia Activities Catalyzed by N,N,N-Triethyl-2-sulfoethan-1-aminium phosphate

description: Synthesis of 3,4-Dihydropyrimidin-2(1<i>H</i>)-ones with Moderate Antileukemia Activities Catalyzed by N,N,N-Triethyl-2-sulfoethan-1-aminium phosphate
DOI: 10.6084/m9.figshare.30234850.v1
title: Synthesis of 3,4-Dihydropyrimidin-2(1<i>H</i>)-ones with Moderate Antileukemia Activities Catalyzed by N,N,N-Triethyl-2-sulfoethan-1-aminium phosphate

description: Synthesis of 3,4-Dihydropyrimidin-2(1<i>H</i>)-ones with Moderate Antileukemia Activities Catalyzed by N,N,N-Triethyl-2-sulfoethan-1-aminium phosphate
DOI: 10.6084/m9.figshare.30258556
title: Green Synthesis of Isoxazole Derivatives via Multicomponent Reactions Using <i>Rumex vesicarius</i> Extract as Catalyst

description: Green Synthesis of Isoxazole Derivatives via Multicomponent Reactions Using <i>Rumex vesicarius</i> Extract as Catalyst
DOI: 10.6084/m9.figshare.30258556.v1
title: Green Synthesis of Isoxazole Derivatives via Multicomponent Reactions Using <i>Rumex vesicarius</i> Extract as Catalyst

description: Green Synthesis of Isoxazole Derivatives via Multicomponent Reactions Using <i>Rumex vesicarius</i> Extract as Catalyst
DOI: 10.5281/zenodo.18379065
title: Comparação de Ferramentas de Workflow
title: Comparison of Workflow Tools

description: Comparação sistemática de ferramentas de workflow/pipeline, a partir da lista disponível em Awesome Pipeline (Commit fe810a0)
DOI: 10.5281/zenodo.18379064
title: Comparação de Ferramentas de Workflow
title: Comparison of Workflow Tools

description: Comparação sistemática de ferramentas de workflow/pipeline, a partir da lista disponível em Awesome Pipeline (Commit fe810a0)
DOI: 10.15468/dl.kmjuwh
title: Occurrence Download

description: A dataset containing 18 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 GBIF_STRINGARRAYCONTAINS(occurrence.classifications['d7dddbf4-2cf0-4f39-9b2a-bb099caae36c'], '6293468', TRUE)
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.classificationdetails['d7dddbf4-2cf0-4f39-9b2a-bb099caae36c']['specieskey'] &lt;&gt; '' AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 18 records were derived from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000149-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18354587
title: Data-Driven Qubit Characterization and Optimal Control using Deep Learning
DOI: 10.5281/zenodo.18354586
title: Data-Driven Qubit Characterization and Optimal Control using Deep Learning
DOI: 10.5281/zenodo.18379027
title: Tools, Challenges, and Defensive Gaps in Reverse Engineering Rust Malware
DOI: 10.5281/zenodo.18379029
title: Tools, Challenges, and Defensive Gaps in Reverse Engineering Rust Malware
DOI: 10.15468/dl.bd9qfc
title: Occurrence Download

description: A dataset containing 15326 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Macaca fascicularis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15326 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000221-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18379112
title: CLINICAL AND HORMONAL MANIFESTATIONS OF HYPOTHALAMIC–PITUITARY DYSFUNCTION IN PRIMARY SCHOOL–AGED CHILDREN AFTER TRAUMATIC BRAIN INJURY

description: Traumatic brain injury (TBI) in children is a significant medical and social problem due to its potential long-term neurological and endocrine consequences. Among these, hypothalamic–pituitary dysfunction represents one of the most underdiagnosed but clinically important complications. This article analyzes the clinical and hormonal manifestations of hypothalamic–pituitary dysfunction in primary school–aged children following traumatic brain injury. The study highlights the spectrum of neuroendocrine disorders, their pathophysiological mechanisms, and diagnostic challenges. Understanding early clinical and hormonal changes is essential for timely diagnosis, appropriate management, and prevention of long-term complications in pediatric patients.
DOI: 10.5281/zenodo.18379111
title: CLINICAL AND HORMONAL MANIFESTATIONS OF HYPOTHALAMIC–PITUITARY DYSFUNCTION IN PRIMARY SCHOOL–AGED CHILDREN AFTER TRAUMATIC BRAIN INJURY

description: Traumatic brain injury (TBI) in children is a significant medical and social problem due to its potential long-term neurological and endocrine consequences. Among these, hypothalamic–pituitary dysfunction represents one of the most underdiagnosed but clinically important complications. This article analyzes the clinical and hormonal manifestations of hypothalamic–pituitary dysfunction in primary school–aged children following traumatic brain injury. The study highlights the spectrum of neuroendocrine disorders, their pathophysiological mechanisms, and diagnostic challenges. Understanding early clinical and hormonal changes is essential for timely diagnosis, appropriate management, and prevention of long-term complications in pediatric patients.
DOI: 10.15468/dl.8m5fcx
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Lichonycteris obscura"
 ]
}

 The dataset includes 8 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000222-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25824/redu/cct2rj
title: Biosynthesis of pipecolic acid-derived cyclodepsipeptides produced by the fungus Penicillium brasilianum

description: This study explores the biosynthesis of pipecolic acid-containing cyclodepsipeptides produced by the fungus Penicillium brasilianum LaBioMMi-136, an endophytic fungus from Melia azedarach. Through genome mining, gene knockout, and in vitro enzymatic assays, we identified a biosynthetic gene cluster responsible for their production and uncovered pipecolic acid's biosynthesis in the fungus. This dataset integrates LC-HRMS and NMR data. Access to the data is restricted for publication reasons. For further information, please contact the responsible authors.
DOI: 10.5281/zenodo.18378891
title: Supramolecular purification of mono-adamantane mixtures by enhanced stability in three-shell Matryoshka-type assemblies

description: The adamantane (Ad) core is widely spread in the pharmaceutical realm since it is considered a lipophilic bullet that boosts the bioactivity of Ad-bearing drugs. However, little is known about the precise recognition modes in confined enzymatic active sites, and poor chromatographic strategies are reported for the purification of mixtures of Ad-derivatives. Here we report on the exquisite supramolecular purification of mono-adamantane mixtures by the development of three-shell supramolecular Matryoshkas featuring an adamantane-cycloparaphenylene (CPP) host-guest adduct encapsulated in a tetragonal prismatic nanocage. The three-shell assembly features an all-in-one strategy, since the encapsulation is inefficient for either [8]CPP or diamondoids alone, and is only formed efficiently when the three components are present. A straightforward solid-state filtration-redissolution protocol allows the purification of diamondoid mixtures, with enhanced preference to amine-bearing adamantane derivatives. This level of supramolecular selectivity among diamondoid complex mixtures is unprecedented, surpassing chromatographic techniques.

This deposit includes parameter files of the nanocapsule and the guests studied (diamontoides and CPP rings), output files of the simulations without solvent of the different systems and files releated to the well-tempered metadynamics carried out.
DOI: 10.5281/zenodo.18378892
title: Supramolecular purification of mono-adamantane mixtures by enhanced stability in three-shell Matryoshka-type assemblies

description: The adamantane (Ad) core is widely spread in the pharmaceutical realm since it is considered a lipophilic bullet that boosts the bioactivity of Ad-bearing drugs. However, little is known about the precise recognition modes in confined enzymatic active sites, and poor chromatographic strategies are reported for the purification of mixtures of Ad-derivatives. Here we report on the exquisite supramolecular purification of mono-adamantane mixtures by the development of three-shell supramolecular Matryoshkas featuring an adamantane-cycloparaphenylene (CPP) host-guest adduct encapsulated in a tetragonal prismatic nanocage. The three-shell assembly features an all-in-one strategy, since the encapsulation is inefficient for either [8]CPP or diamondoids alone, and is only formed efficiently when the three components are present. A straightforward solid-state filtration-redissolution protocol allows the purification of diamondoid mixtures, with enhanced preference to amine-bearing adamantane derivatives. This level of supramolecular selectivity among diamondoid complex mixtures is unprecedented, surpassing chromatographic techniques.

This deposit includes parameter files of the nanocapsule and the guests studied (diamontoides and CPP rings), output files of the simulations without solvent of the different systems and files releated to the well-tempered metadynamics carried out.
DOI: 10.15468/dl.p53q52
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Eumops hansae"
 ]
}

 The dataset includes 10 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000223-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yyvy5n
title: Occurrence Download

description: A dataset containing 435 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "PublishingOrg is b4640710-8e03-11d8-b956-b8a03c50a862",
 "TaxonKey is Asterinidae"
 ]
}

 The dataset includes 435 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000225-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fuddwh
title: Occurrence Download

description: A dataset containing 44909 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neovison vison",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 44909 records from 260 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000224-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18378963
title: Effects of augmented reality landmark visualization on incidental spatial knowledge acquisition in autonomous driving: a virtual reality experiment

description: The analysis code was written in RStudio.

The eye-tracking data folder contains four subfolders, each corresponding to participants’ raw eye-tracking data for one experimental condition.

Participant_data_processed.csv: participants’ responses to the pre-questionnaire, their performance in the spatial knowledge tasks, and processed eye-tracking measures.
DOI: 10.5281/zenodo.18378962
title: Effects of augmented reality landmark visualization on incidental spatial knowledge acquisition in autonomous driving: a virtual reality experiment

description: The analysis code was written in RStudio.

The eye-tracking data folder contains four subfolders, each corresponding to participants’ raw eye-tracking data for one experimental condition.

Participant_data_processed.csv: participants’ responses to the pre-questionnaire, their performance in the spatial knowledge tasks, and processed eye-tracking measures.
DOI: 10.5281/zenodo.18378641
title: data for Optical probing of magnons and phonons in Ni80Fe20 nanodot arrays

description: The dataset contains information to reproduce Figure. 3(a-d)  from the manuscript Optical probing of magnons and phonons in Ni80Fe20 nanodot arrays



The file Phonon_hexagonal_a=350nm.opj contains the dataset for Figure. 3a - TR-MOKE phonon spectrum for SiO2 decorated by the hexagonal lattice of Py dots.

The file Magnon_hexagonal_a=350nm.opj contains the dataset for Figure. 3b - TR-MOKE magnon spectrum for SiO2 decorated by the hexagonal lattice of Py dots.

The file Phonon_square_a=350nm.opj contains the dataset for Figure. 3c - TR-MOKE phonon spectrum for SiO2 decorated by the square lattice of Py dots.

The file Magnon_square_a=350nm.opj contains the dataset for Figure. 3d - TR-MOKE magnon spectrum for SiO2 decorated by the square lattice of Py dots.
DOI: 10.5281/zenodo.18378642
title: data for Optical probing of magnons and phonons in Ni80Fe20 nanodot arrays

description: The dataset contains information to reproduce Figure. 3(a-d)  from the manuscript Optical probing of magnons and phonons in Ni80Fe20 nanodot arrays



The file Phonon_hexagonal_a=350nm.opj contains the dataset for Figure. 3a - TR-MOKE phonon spectrum for SiO2 decorated by the hexagonal lattice of Py dots.

The file Magnon_hexagonal_a=350nm.opj contains the dataset for Figure. 3b - TR-MOKE magnon spectrum for SiO2 decorated by the hexagonal lattice of Py dots.

The file Phonon_square_a=350nm.opj contains the dataset for Figure. 3c - TR-MOKE phonon spectrum for SiO2 decorated by the square lattice of Py dots.

The file Magnon_square_a=350nm.opj contains the dataset for Figure. 3d - TR-MOKE magnon spectrum for SiO2 decorated by the square lattice of Py dots.
DOI: 10.15468/dl.v4rhk2
title: Occurrence Download

description: A dataset containing 156268 records in GBIF matching the query:
SELECT
 '402' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= 37.42857426825602
 AND decimalLatitude &lt;= 41.89415215079384
 AND decimalLongitude &gt;= -77.9229717807129
 AND decimalLongitude &lt;= -69.0769461528656
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 156268 records were derived from 397 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000205-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.