cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26945634.v1
title: Additional file 17 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 17
DOI: 10.6084/m9.figshare.26945421.v1
title: Additional file 1 of Differential changes in the morphology and fuel loads of obligatory and partial migrant passerines over half a century in Britain

description: Supplementary Material 1: Table_i: contains sample sizes, number of standard deviations to which outliers were removed, and years from which data was included.
DOI: 10.6084/m9.figshare.26945655
title: Additional file 4 of Repurposing of a library for high-content screening of inhibitors against Echinococcus granulosus

description: Additional file 4: Dataset S3. Summary of secondary hits from the SelleckChem library.
DOI: 10.6084/m9.figshare.26945295
title: Additional file 1 of Tilorone mitigates the propagation of α-synucleinopathy in a midbrain-like organoid model

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26945655.v1
title: Additional file 4 of Repurposing of a library for high-content screening of inhibitors against Echinococcus granulosus

description: Additional file 4: Dataset S3. Summary of secondary hits from the SelleckChem library.
DOI: 10.6084/m9.figshare.26945559.v1
title: Additional file 3 of Improved simultaneous mapping of epigenetic features and 3D chromatin structure via ViCAR

description: Additional file 3: Table S2. Differential gene expression analysis (RNA-seq).
DOI: 10.6084/m9.figshare.26945391.v1
title: Additional file 4 of Single-cell and spatial sequencing identifies senescent and germinal tumor cells in adamantinomatous craniopharyngiomas

description: Additional file 4: Table S4. Gene significantly associated with the pseudo-time of the tumor developmental trajectory in P432 and P455.
DOI: 10.6084/m9.figshare.26424589
title: MSTFCM

description: The code and data for "A multi-task spatio-temporal fully convolutional model incorporating interaction patterns for traffic flow prediction"
DOI: 10.6084/m9.figshare.26945475.v1
title: Additional file 12 of RNA-seq analyses on gametogenic tissues of alfalfa (Medicago sativa) revealed plant reproduction- and ploidy-related genes

description: Supplementary Material 12
DOI: 10.6084/m9.figshare.26945523.v1
title: Additional file 4 of Clostridium autoethanogenum alters cofactor synthesis, redox metabolism, and lysine-acetylation in response to elevated H2:CO feedstock ratios for enhancing carbon capture efficiency

description: Additional file 4: Supplemental Table S10. Binary Comparison Quantitative proteomic analysis Results. Table S10. Low vs High H2:CO Condition Ttest Comparison. The abundances shown (in 5:1 uptake and 11:1 uptake columns along with hidden replicate columns) are normalized, log transformed, and imputed. Protein abundance numbers shown in red indicate imputed values. T-tests compare the Day 43 and 20 samples from the 5:1 H2O condition to the Day 14 and day 21 samples from the 11:1 H2O condition.
DOI: 10.6084/m9.figshare.26945547.v1
title: Additional file 1 of Population structure and breed identification of Chinese indigenous sheep breeds using whole genome SNPs and InDels

description: Additional file 1. Table S1. Detailed sequencing information of the 349 individuals involved in this study. Table S2. Average (over 50 replicates) numbers of individuals assigned to different breeds in each breed (in rows) based on the random forest classification algorithm using 5000 most breed-informative SIs revealed by DFI_union. Table S3. Average (over 50 replicates) numbers of individuals assigned to different breeds in each breed (in rows) based on the support vector machine classification algorithm using the 5000 most breed-informative SIs revealed by DFI_union.
DOI: 10.6084/m9.figshare.26945592.v1
title: Additional file 3 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 3
DOI: 10.15468/dl.su36bg
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Argentina",
 "TaxonKey is Ruprechtia salicifolia (Cham. & Schltdl.) C.A.Mey."
 ]
}

 The dataset includes 53 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117334-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26945601
title: Additional file 6 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.26945616.v1
title: Additional file 11 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 11
DOI: 10.6084/m9.figshare.26945298
title: Additional file 2 of Tilorone mitigates the propagation of α-synucleinopathy in a midbrain-like organoid model

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26944983
title: Additional file 20 of Wolbachia strain diversity in a complex group of sympatric cryptic parasitoid wasp species

description: Supplementary Material 20
DOI: 10.6084/m9.figshare.26944977
title: Additional file 18 of Wolbachia strain diversity in a complex group of sympatric cryptic parasitoid wasp species

description: Supplementary Material 18
DOI: 10.6084/m9.figshare.26944785
title: Additional file 14 of Characterizing PFAS hazards and risks: a human population-based in vitro cardiotoxicity assessment strategy

description: Supplementary Material 14
DOI: 10.6084/m9.figshare.26945451
title: Additional file 6 of RNA-seq analyses on gametogenic tissues of alfalfa (Medicago sativa) revealed plant reproduction- and ploidy-related genes

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.26945595.v1
title: Additional file 4 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.26945631
title: Additional file 16 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 16
DOI: 10.6084/m9.figshare.26945514.v1
title: Additional file 1 of Clostridium autoethanogenum alters cofactor synthesis, redox metabolism, and lysine-acetylation in response to elevated H2:CO feedstock ratios for enhancing carbon capture efficiency

description: Additional file 1: Supplemental Tables 1–5. Proteome Discoverer Results Table S1. All Conditions Protein results. Proteome Discoverer protein results filtered for common contaminates. Table S2. Peptide results. Proteome Discoverer peptide results filtered for common contaminates. Table S3. Peptide results with Acetylation Modifications. Proteome Discoverer peptide results with added search parameter to look for lysine-acetylation and filtered for common contaminates. Table S4. Peptide results with Biotinylation Modifications. Proteome Discoverer peptide results with added search parameter to look for lysine biotinylation and filtered for common contaminates. Table S5. Peptide results with Methylation Modifications. Proteome Discoverer peptide results with added search parameter to look for single, double, or triple methylation on Lysine or arginine residues and filtered for common contaminates. NA = not detected.
DOI: 10.6084/m9.figshare.26945652
title: Additional file 3 of Repurposing of a library for high-content screening of inhibitors against Echinococcus granulosus

description: Additional file 3: Dataset S2. Summary of secondary hits from the Sigma-Aldrich LOPAC1280library.
DOI: 10.6084/m9.figshare.26945466
title: Additional file 11 of RNA-seq analyses on gametogenic tissues of alfalfa (Medicago sativa) revealed plant reproduction- and ploidy-related genes

description: Supplementary Material 11
DOI: 10.6084/m9.figshare.26945421
title: Additional file 1 of Differential changes in the morphology and fuel loads of obligatory and partial migrant passerines over half a century in Britain

description: Supplementary Material 1: Table_i: contains sample sizes, number of standard deviations to which outliers were removed, and years from which data was included.
DOI: 10.6084/m9.figshare.26945622.v1
title: Additional file 13 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 13
DOI: 10.6084/m9.figshare.26945589
title: Additional file 2 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 2
DOI: 10.15468/dl.rhnkz7
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae, Veliidae Brullé, 1836, Veliidae Brulle 1836, Veliidae Brulle 1836, Veliidae Brullé, 1836, Veliidae Brullé, 1836, Veliidae Amyot & Serville, 1843, Veliidae Amyot & Serville, 1843, Veliidae Amyot & Serville, 1843, Veliidae Amyot & Serville, 1843, Veliidae Amyot & Serville, 1843, Veliidae Amyot & Serville, 1843, Veliidae Amyot & Serville, 1843, Veliidae Amyot & Serville 1843, Veliidae Amyot & Serville 1843, Veliidae (Amyot & Serville, 1843), Veliidae Amyot & Audinet-Serville, 1843, Hebridae, Hebridae Amyot & Serville, 1843, Gerridae Leach, 1815, Gerridae Leach, 1815)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117335-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26945613
title: Additional file 10 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.26945604
title: Additional file 7 of Integrative microbiome and metabolome profiles reveal the impacts of periodontitis via oral-gut axis in first-trimester pregnant women

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.21485720
title: Additional file 1 of Clinical application of artificial neural network (ANN) modeling to predict BRCA1/2 germline deleterious variants in Chinese bilateral primary breast cancer patients

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.21485750
title: Additional file 15 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 15: Table S6. The primers used in this study.
DOI: 10.6084/m9.figshare.21485750.v1
title: Additional file 15 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 15: Table S6. The primers used in this study.
DOI: 10.6084/m9.figshare.21485753
title: Additional file 1 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 1: Table S1. Summary of CBL gene characteristics in Medicago and C. arietinum.
DOI: 10.6084/m9.figshare.21485753.v1
title: Additional file 1 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 1: Table S1. Summary of CBL gene characteristics in Medicago and C. arietinum.
DOI: 10.6084/m9.figshare.21485756
title: Additional file 2 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 2: Table S2. Summary of CIPK gene characteristics in Medicago and C. arietinum.
DOI: 10.6084/m9.figshare.21485756.v1
title: Additional file 2 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 2: Table S2. Summary of CIPK gene characteristics in Medicago and C. arietinum.
DOI: 10.6084/m9.figshare.22010048
title: OSER assay in HeLa cells

description: Randomly picked images of HeLa cells expressing Cyt-ERM fusion, used for OSER assay. See barcoding for corresponding protein. Complete dataset available upon request.  
Recent progress in fluorescent protein development has generated a large diversity of near-infrared fluorescent proteins, which are rapidly becoming popular probes for a variety of imaging applications. To assist end-users with a selection of the right near-infrared fluorescent protein for a given application, we conducted a quantitative assessment of intracellular brightness, photostability, oligomeric state, and cytotoxicity of 22 near-infrared fluorescent proteins in cultured HEK cells and primary mouse neurons. The top-performing proteins were further validated for <em>in vivo</em> imaging of neurons in <em>C. elegans</em>, zebrafish, and mice as well as in liver of mice. We also assessed the applicability of the selected NIR FPs for multi-color imaging of fusions, expansion microscopy, and two-photon imaging.
DOI: 10.6084/m9.figshare.21485762
title: Additional file 4 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 4: Table S3. CBL protein sequences used to build phylogenetic tree.
DOI: 10.6084/m9.figshare.21485762.v1
title: Additional file 4 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 4: Table S3. CBL protein sequences used to build phylogenetic tree.
DOI: 10.6084/m9.figshare.7854275
title: Additional file 1 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: The transfection data for checking the predicted results of miRNA-mRNA regulation relationships. This file should be viewed by R. (RDA 29,853 kb)
DOI: 10.6084/m9.figshare.7854275.v1
title: Additional file 1 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: The transfection data for checking the predicted results of miRNA-mRNA regulation relationships. This file should be viewed by R. (RDA 29,853 kb)
DOI: 10.6084/m9.figshare.21485768
title: Additional file 6 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 6: Table S4. CIPK protein sequences used to build phylogenetic tree.
DOI: 10.6084/m9.figshare.21485768.v1
title: Additional file 6 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 6: Table S4. CIPK protein sequences used to build phylogenetic tree.
DOI: 10.6084/m9.figshare.21485771
title: Additional file 7 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 7: Table S5. Ks value of paralog pairs of CBL and CIPK genes in M. sativa spp. sativa.
DOI: 10.6084/m9.figshare.21485771.v1
title: Additional file 7 of Evolution of the CBL and CIPK gene families in Medicago: genome-wide characterization, pervasive duplication, and expression pattern under salt and drought stress

description: Additional file 7: Table S5. Ks value of paralog pairs of CBL and CIPK genes in M. sativa spp. sativa.
DOI: 10.6084/m9.figshare.7854284
title: Additional file 2 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: The confirmed miRNA-mRNA interactions retrieved from miRTarbase 6.1, TarBase 7.0, miRWalk 2.0. (CSV 10,149 kb)
DOI: 10.6084/m9.figshare.7854284.v1
title: Additional file 2 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: The confirmed miRNA-mRNA interactions retrieved from miRTarbase 6.1, TarBase 7.0, miRWalk 2.0. (CSV 10,149 kb)
DOI: 10.6084/m9.figshare.7854290
title: Additional file 3 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: Top 50, 100, 150 and 200 predicted miRNA-mRNA interactions for each miRNA by hiddenICP-Pam50. (XLSX 414 kb)
DOI: 10.6084/m9.figshare.7854290.v1
title: Additional file 3 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: Top 50, 100, 150 and 200 predicted miRNA-mRNA interactions for each miRNA by hiddenICP-Pam50. (XLSX 414 kb)
DOI: 10.6084/m9.figshare.7854305
title: Additional file 4 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: Top 2000 predicted miRNA-mRNA interactions for all miRNAs by hiddenICP-Pam50. (CSV 77 kb)
DOI: 10.6084/m9.figshare.7854305.v1
title: Additional file 4 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: Top 2000 predicted miRNA-mRNA interactions for all miRNAs by hiddenICP-Pam50. (CSV 77 kb)
DOI: 10.6084/m9.figshare.7854314
title: Additional file 5 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: The detailed enrichment analysis results of functional annotation of miRNAs. (XLSX 100 kb)
DOI: 10.6084/m9.figshare.7854314.v1
title: Additional file 5 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: The detailed enrichment analysis results of functional annotation of miRNAs. (XLSX 100 kb)
DOI: 10.6084/m9.figshare.22010099
title: NIR FP brightness in C elegans

description: Complete dataset of brightness imaging in C elegans. See barcoding file for corresponding protein.  
Recent progress in fluorescent protein development has generated a large diversity of near-infrared fluorescent proteins, which are rapidly becoming popular probes for a variety of imaging applications. To assist end-users with a selection of the right near-infrared fluorescent protein for a given application, we conducted a quantitative assessment of intracellular brightness, photostability, oligomeric state, and cytotoxicity of 22 near-infrared fluorescent proteins in cultured HEK cells and primary mouse neurons. The top-performing proteins were further validated for <em>in vivo</em> imaging of neurons in <em>C. elegans</em>, zebrafish, and mice as well as in liver of mice. We also assessed the applicability of the selected NIR FPs for multi-color imaging of fusions, expansion microscopy, and two-photon imaging.
DOI: 10.6084/m9.figshare.7854326
title: Additional file 6 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: The expression of matched miRNAs and mRNAs of the breast adenocarcinoma (BRCA) data set is downloaded from The Cancer Genome Atlas (TCGA). This file should be viewed by R. (RDATA 92,179 kb)
DOI: 10.6084/m9.figshare.7854326.v1
title: Additional file 6 of Identifying miRNA-mRNA regulatory relationships in breast cancer with invariant causal prediction

description: The expression of matched miRNAs and mRNAs of the breast adenocarcinoma (BRCA) data set is downloaded from The Cancer Genome Atlas (TCGA). This file should be viewed by R. (RDATA 92,179 kb)
DOI: 10.6084/m9.figshare.16767226
title: Speech production in Mandarin-speaking children with cochlear implants: a systematic review

description: This study aimed to systematically review and critically appraise the literature describing the phonetic characteristics and accuracy of the consonants, vowels and tones produced by Mandarin-speaking children with cochlear implants (CIs). The protocol in this review was designed in conformity with the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) statement. EBSCOhost, PubMed, Scopus, PsycINFO, ProQuest Central databases were searched for relevant articles which met the inclusion criteria. A total of 18 journal papers were included in this review. The results revealed that Mandarin-speaking children with CIs perform consistently more poorly in their production of consonants, in particular on fricatives, have a smaller and less well-defined vowel space, and exhibit greater difficulties in tone realisation, notably T2 and T3, when compared to their normal-hearing (NH) peers. The results from acoustic and accuracy analyses are negatively correlated with CI implantation age, but largely positively correlated with hearing age. Findings of this review highlight the factors that influence consonant, vowel and tone production in Mandarin-speaking children with CIs, thereby providing critical information for clinicians and researchers working with this population.