cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11209074
title: Bacterial homologs of innate eukaryotic antiviral defenses provide phage protection.

description: Supplementary data regarding the 'Bacterial homologs of innate eukaryotic antiviral defenses provide phage protection' manuscript.
 
Abstract:Prokaryotes have evolved a multitude of defense systems to protect themselves from bacteriophage predation. Here, we discovered new phage defense systems related to innate antiviral genes from vertebrates and plants. Our search uncovered over 400 candidates from which eleven were selected and six novel phage defense systems validated. We identified a DNA replication helicase/nuclease 2 (Prometheus) which may act on transcription R-loops, an inositol-monophosphatase-like phage defense protein (Pan), and two ATPases from the NACHT family coupled to novel effectors NucS and SfsA (Nyx and Hypnos). In addition, a fused ubiquitin-like E1-E2-JAB protein combined with a putative MBL nuclease (6A-MBL) was found, and a novel member of the Thoeris family that contains four essential TIR domains with a putative effector SLOG domain (Thoeris type III). Collectively, these defense systems support the concept of deep evolutionary links and shared antiviral mechanisms between prokaryotes and eukaryotes.
DOI: 10.5281/zenodo.11209127
title: Bacterial homologs of innate eukaryotic antiviral defenses provide phage protection.

description: Supplementary data regarding the 'Bacterial homologs of innate eukaryotic antiviral defenses provide phage protection' manuscript.
 
Abstract:Prokaryotes have evolved a multitude of defense systems to protect themselves from bacteriophage predation. Here, we discovered new phage defense systems related to innate antiviral genes from vertebrates and plants. Our search uncovered over 400 candidates from which eleven were selected and six novel phage defense systems validated. We identified a DNA replication helicase/nuclease 2 (Prometheus) which may act on transcription R-loops, an inositol-monophosphatase-like phage defense protein (Pan), and two ATPases from the NACHT family coupled to novel effectors NucS and SfsA (Nyx and Hypnos). In addition, a fused ubiquitin-like E1-E2-JAB protein combined with a putative MBL nuclease (6A-MBL) was found, and a novel member of the Thoeris family that contains four essential TIR domains with a putative effector SLOG domain (Thoeris type III). Collectively, these defense systems support the concept of deep evolutionary links and shared antiviral mechanisms between prokaryotes and eukaryotes.
DOI: 10.5281/zenodo.11209309
title: tRNAs common interactions
DOI: 10.5281/zenodo.11209310
title: tRNAs common interactions
DOI: 10.15468/dl.3u84nz
title: Occurrence Download

description: A dataset containing 311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Mangifera indica L."
 ]
}

 The dataset includes 311 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021545-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ns7fjm
title: Occurrence Download

description: A dataset containing 489 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Citrus sinensis (Mill.) Pers., 1806"
 ]
}

 The dataset includes 489 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021546-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xp3s4r
title: Occurrence Download

description: A dataset containing 662 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Citrus grandis Hassk., 1842"
 ]
}

 The dataset includes 662 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021547-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4egz8
title: Occurrence Download

description: A dataset containing 816 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Issue is Continent derived from coordinates",
 "OccurrenceStatus is Present",
 "TaxonKey is Ursus americanus Pallas, 1780"
 ]
}

 The dataset includes 816 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021548-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fna2s4
title: Occurrence Download

description: A dataset containing 747 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Acer truncatum Bunge"
 ]
}

 The dataset includes 747 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021549-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25402/ppa.19932248.v1
title: PPA-2021-0023 - Remdesivir Overview

description: By December 2021, the COVID-19 caused approximately 6.1 million deaths around the world. Several
vaccines have been approved, but there is still a need for non-prophylactic treatments for COVID-19.
Remdesivir is an antiviral drug approved for emergency use against COVID-19 in several countries, but
one of the first clinical trials was inconclusive about the mortality reduction, although the drug showed a
reduction in the recovery time of hospitalized patients. Thus, the present investigation revisits the clinical
evidence of using remdesivir for COVID-19 treatment, patent status, pharmacology and chemistry. We
found 184 families of patents in the Cortellis database, and concerning the clinical evidence, we retrieved
14 systematic reviews with meta-analysis involving remdesivir as a treatment for COVID-19, discussing the
reduction of adverse events, hospitalization days, mortality rate and the mechanical ventilation period.
DOI: 10.25402/ppa.21687827.v1
title: Recent developments in silver nanoparticles utilized for cancer treatment and diagnosis: a patent review Supporting Info

description: Nanotheranostics is a young but rapidly expanding science that incorporates elements of therapy
and diagnostics in a unique and miniscule area of research. The potential to combine diagnostic and
therapeutic abilities inside a complete unit opens up interesting possibilities for innovative biomedical
research. Silver-based nanoparticles, for instance, are widely utilized as pharmacological and biomedical
imaging molecules, and hence offer a lot of potential for the development of versatile targeted therapy
compositions. These nanoparticles have been used for cancer diagnosis and cancer treatments recently.
We evaluate major innovations based on silver nanotheranostics technologies in this review paper, with
an emphasis on cancer treatment implications. The present review covers papers, from 2010 to 2020.
DOI: 10.5281/zenodo.11209316
title: Factors affecting onion production: an empirical study in the Raya Kobo District, Amhara Regional State, Ethiopia

description: This is the excel data format covering farm household charactersitcs, plot characterstics and institutional characterstics and that support the findings of "Factors Affecting Onion Production: an Empirical Study in the Raya Kobo District, Amhara Regional State, Ethiopia".
DOI: 10.5281/zenodo.11209317
title: Factors affecting onion production: an empirical study in the Raya Kobo District, Amhara Regional State, Ethiopia

description: This is the excel data format covering farm household charactersitcs, plot characterstics and institutional characterstics and that support the findings of "Factors Affecting Onion Production: an Empirical Study in the Raya Kobo District, Amhara Regional State, Ethiopia".
DOI: 10.14473/csda/dq6vas/shx9xu
title: D_CSDA00149.pdf

description: Dotazník
DOI: 10.14473/csda/dq6vas/bkzaxf
title: TI_CSDA00149.pdf

description: Technická informace
DOI: 10.14473/csda/dq6vas/wgus4e
title: OM_CSDA00149.pdf

description: Ostatní materiály
DOI: 10.15468/dl.ks9qfm
title: Occurrence Download

description: A dataset containing 2464729 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Mammalia",
 "Year 2000-2024"
 ]
}

 The dataset includes 2464729 records from 610 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021541-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11209163
title: Investigating radar data assimilation for winter cases using ICON-KENDA system

description: hydro+wind.zip for data of hydrometeors, horizontal wind and vertical velocityfeedback_files.zip for feedback files of the data assimilation cyclingforecast.zip for verification scores of the ensemble forecasts
DOI: 10.5281/zenodo.11209164
title: Investigating radar data assimilation for winter cases using ICON-KENDA system

description: hydro+wind.zip for data of hydrometeors, horizontal wind and vertical velocityfeedback_files.zip for feedback files of the data assimilation cyclingforecast.zip for verification scores of the ensemble forecasts
DOI: 10.3886/e202001
title: Data and Code for Shocking Offers: Gender, Wage Inequality, and Recessions in Online Labor Market

description: Using data from the largest online job portal in Nigeria, we document: (a) gender differences in salary offers for jobs, and (b) the response of (a) to recessions. Jobs in industries where the number of job applicants skews female, offer lower starting salaries than jobs in industries where applicants skew male. During Nigeria’s 2016 recession, overall job applications rose, but applications to jobs in industries that skew male increased more than applications to jobs in industries that skew female. Salary offers fell sharply for jobs in male-skewed industries compared to female-skewed industries. In accordance with this relative shift in applications, in 2016, the salary-offer gender gap almost disappeared.
DOI: 10.3886/e202001v1
title: Data and Code for Shocking Offers: Gender, Wage Inequality, and Recessions in Online Labor Market

description: Using data from the largest online job portal in Nigeria, we document: (a) gender differences in salary offers for jobs, and (b) the response of (a) to recessions. Jobs in industries where the number of job applicants skews female, offer lower starting salaries than jobs in industries where applicants skew male. During Nigeria’s 2016 recession, overall job applications rose, but applications to jobs in industries that skew male increased more than applications to jobs in industries that skew female. Salary offers fell sharply for jobs in male-skewed industries compared to female-skewed industries. In accordance with this relative shift in applications, in 2016, the salary-offer gender gap almost disappeared.
DOI: 10.15468/dl.khx48c
title: Occurrence Download

description: A dataset containing 4591 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Spain",
 "TaxonKey is Cetacea"
 ]
}

 The dataset includes 4591 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021552-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/kzqrnw
title: Farm_performances_aggregated.tab

description: Farm performance indicators: 1 line = 1 farm * 1 campaign
DOI: 10.57745/83awvr
title: Farm_operations_raw.xlsx

description: Farm traceability: 1 line = 1 farm * 1 intervention * 1 input
DOI: 10.57745/yodoxf
title: Variables_description.tab

description: Glossary of variables, values they contain and references used in their computation
DOI: 10.15468/dl.p8zbzt
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is CNMA/Colección Nacional de mamíferos",
 "Geometry MULTIPOLYGON(((-104.21159 21.18161,-104.02524 21.20329,-103.97164 21.25174,-103.90008 21.23354,-103.81891 21.25681,-103.74243 21.38185,-103.76298 21.39435,-103.74968 21.41679,-103.72588 21.41706,-103.77461 21.50246,-103.82223 21.5019,-103.90935 21.64729,-103.88627 21.70171,-103.91807 21.78091,-104.13677 21.81305,-104.16104 21.83819,-104.15484 21.87648,-104.18249 21.89838,-104.16677 21.9814,-104.2217 21.99972,-104.25899 21.98326,-104.2799 22.00842,-104.36139 21.98172,-104.31449 22.23083,-104.27127 22.30472,-104.27252 22.37795,-104.36597 22.43388,-104.51571 22.38055,-104.59974 22.4747,-104.64446 22.4835,-104.64985 22.58214,-104.74585 22.58047,-104.76808 22.6597,-104.88156 22.67036,-104.97792 22.52839,-104.97942 22.59525,-105.02873 22.65162,-105.03274 22.67703,-104.87251 22.72787,-104.93163 22.76179,-104.92624 22.82879,-104.98491 22.84041,-104.97919 22.89148,-105.01098 22.92909,-104.99093 22.95497,-105.32465 22.95772,-105.3621 23.07796,-105.41355 23.07046,-105.41265 23.03544,-105.44344 23.02839,-105.44883 22.97093,-105.5072 22.96643,-105.47099 22.89716,-105.49404 22.85842,-105.52628 22.77805,-105.50274 22.66709,-105.40979 22.65642,-105.39053 22.57403,-105.26042 22.5832,-105.20083 22.53029,-105.06543 22.6063,-105.00977 22.57236,-105.00084 22.48016,-105.05827 22.444,-104.98001 22.16206,-104.84946 22.13269,-104.81917 21.99311,-104.90605 21.90551,-104.93083 21.7904,-104.84896 21.78875,-104.74081 21.8353,-104.52585 21.46963,-104.48505 21.4703,-104.48416 21.42255,-104.34514 21.24965,-104.34514 21.24965,-104.34514 21.24965,-104.21159 21.18161)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chiroptera"
 ]
}

 The dataset includes 130 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021553-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14473/csda/1x5vkz
title: Průzkum uživatelů ČSDA 2020

description: Český sociálněvědní datový archiv (ČSDA) Sociologického ústavu AV ČR, v.v.i. odborně zpracovává, dokumentuje a ukládá ze sociálně vědních výzkumných projektů data, propojuje je s relevantními výzkumnými informacemi a kontextem dalších dat a materiálů, a dále také podporuje sekundární analýzu v akademické i vzdělávací sféře. Kromě toho ČSDA pořádá také různé aktivity, jako jsou například semináře, konference nebo workshopy, navíc je zapojen v mnoha projektech různých výzkumných infrastruktur. Vzhledem k tomu, že se neustále snažíme pracovat na vylepšování našich služeb, je pro nás velmi důležitý názor našich uživatelů. Rozhodli jsme se proto kontaktovat registrované uživatele a zeptat se jich, co si o našem archivu myslí, zda se nám daří naplňovat jejich potřeby spojené s archivem a případně jaká je jejich představa budoucího směřování archivu tak, aby jim jeho využívání vyhovovalo. Mezi 6. lednem a 10. únorem byl proveden krátký anonymní online dotazník, v rámci kterého bylo osloveno celkem 3398 uživatelů registrovaných v naší databázi. Respondenty jsme oslovili skrze jejich emailové adresy: 312 kontaktů se nám vrátilo jako nedoručitelných, 6 bylo vyloučeno z různých důvodů (smrt, ukončené zaměstnání nebo na vlastní žádost), 174 respondentů využilo možnosti samostatného odhlášení se z výzkumu a 301 osob sice dotazník otevřelo, ale nevyplnilo žádnou otázku. Celkem 263 respondentů náš krátký dotazník vyplnilo, návratnost tedy činí 7 %. Vzhledem k tomu, že drtivá většina uživatelů ČSDA je české národnosti (cca 90 %), dotazník byl dostupný pouze v českém jazyce. Z důvodu relativně vysokého zájmu cizinců jsme se ale rozhodli v příštích letech zapojit i anglicky mluvící část registrovaných uživatelů. Dotazník sestával z deseti krátkých otázek, které byly cíleny na frekvenci využívání našeho datového archivu, afiliace uživatelů a typy aktivit, které skrze využití archivu vykonávají, funkce Nesstaru, které používají, citační praxe, jiné datové archivy, které používají, výtky/pochvaly směrem k archivu. Respondenti dostali také prostor pro vyjádření svých návrhů nebo přání. V rámci dotazníku jsme se soustředili pouze na informace relevantní vzhledem k fungování ČSDA, a tak jsme se rozhodli zcela upustit od dotazování se na věk, pohlaví/gender a jiné sociodemografické informace.
DOI: 10.14473/csda/1x5vkz/sufbol
title: TI_CSDA00251.pdf

description: Závěrečný report z výzkumu, včetně dotazníku
DOI: 10.15468/dl.whp5f9
title: Occurrence Download

description: A dataset containing 3678 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corydalis nobilis (L.) Pers."
 ]
}

 The dataset includes 3678 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021555-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10210781
title: Bacterial homologs of innate eukaryotic antiviral defenses provide phage protection.

description: Supplementary data regarding the 'Bacterial homologs of innate eukaryotic antiviral defenses provide phage protection' manuscript.
 
Abstract:Prokaryotes have evolved a multitude of defense systems to protect themselves from bacteriophage predation. Here, we discovered new phage defense systems related to innate antiviral genes from vertebrates and plants. Our search uncovered over 400 candidates from which eleven were selected and six novel phage defense systems validated. We identified a DNA replication helicase/nuclease 2 (Prometheus) which may act on transcription R-loops, an inositol-monophosphatase-like phage defense protein (Pan), and two ATPases from the NACHT family coupled to novel effectors NucS and SfsA (Nyx and Hypnos). In addition, a fused ubiquitin-like E1-E2-JAB protein combined with a putative MBL nuclease (6A-MBL) was found, and a novel member of the Thoeris family that contains four essential TIR domains with a putative effector SLOG domain (Thoeris type III). Collectively, these defense systems support the concept of deep evolutionary links and shared antiviral mechanisms between prokaryotes and eukaryotes.
DOI: 10.5281/zenodo.11209165
title: Bacterial homologs of innate eukaryotic antiviral defenses provide phage protection.

description: Supplementary data regarding the 'Bacterial homologs of innate eukaryotic antiviral defenses provide phage protection' manuscript.
 
Abstract:Prokaryotes have evolved a multitude of defense systems to protect themselves from bacteriophage predation. Here, we discovered new phage defense systems related to innate antiviral genes from vertebrates and plants. Our search uncovered over 400 candidates from which eleven were selected and six novel phage defense systems validated. We identified a DNA replication helicase/nuclease 2 (Prometheus) which may act on transcription R-loops, an inositol-monophosphatase-like phage defense protein (Pan), and two ATPases from the NACHT family coupled to novel effectors NucS and SfsA (Nyx and Hypnos). In addition, a fused ubiquitin-like E1-E2-JAB protein combined with a putative MBL nuclease (6A-MBL) was found, and a novel member of the Thoeris family that contains four essential TIR domains with a putative effector SLOG domain (Thoeris type III). Collectively, these defense systems support the concept of deep evolutionary links and shared antiviral mechanisms between prokaryotes and eukaryotes.
DOI: 10.15468/dl.pwawf8
title: Occurrence Download

description: A dataset containing 565 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Bromus pectinatus Thunb."
 ]
}

 The dataset includes 565 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021556-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rfwr5c
title: Occurrence Download

description: A dataset containing 252035 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is CAS Invertebrate Zoology (IZ)"
 ]
}

 The dataset includes 252035 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021551-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9bqr9t
title: Occurrence Download

description: A dataset containing 1208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Scutellaria baicalensis Georgi"
 ]
}

 The dataset includes 1208 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021557-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6ccms
title: Occurrence Download

description: A dataset containing 57099 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Spilopelia chinensis (Scopoli, 1786)"
 ]
}

 The dataset includes 57099 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021550-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c48xfg
title: Occurrence Download

description: A dataset containing 422 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "CoordinateUncertaintyInMeters 0.0-545.0",
 "CoordinateUncertaintyInMeters 0.0-1799.0"
 ]
 },
 "TaxonKey is Apodemus peninsulae (Thomas, 1907)"
 ]
}

 The dataset includes 422 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021558-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uv5pq4
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Begonia acclivis Coyle"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021559-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9rsba5
title: Occurrence Download

description: A dataset containing 27498 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Streptopelia orientalis (Latham, 1790)"
 ]
}

 The dataset includes 27498 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021560-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8449033
title: ⏳ endoflife.date database (duckdb)
DOI: 10.15468/dl.2kjvgj
title: Occurrence Download

description: A dataset containing 20568 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Spodiopsar cineraceus (Temminck, 1835)"
 ]
}

 The dataset includes 20568 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021561-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.