cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.jm4xn7
title: Occurrence Download

description: A dataset containing 1617 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((60.71153 5.42923,173.28034 5.42923,173.28034 50.42923,60.71153 50.42923,60.71153 5.42923))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Callicarpa bodinieri H.Lév."
 ]
}

 The dataset includes 1617 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073458-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rfomw8
title: Occurrence Download

description: A dataset containing 777 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Pinus flexilis E.James",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 777 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006423-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t77ywk
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Atelopus laetissimus Ruiz-Carranza, Ardila-Robayo & Hernández-Camacho, 1994"
 ]
}

 The dataset includes 52 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249040-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2uhpq4
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Olenecamptus bilobus bilobus",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0209415-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tbdpd6
title: Occurrence Download

description: A dataset containing 4268 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Laniocera hypopyrra (Vieillot, 1817)"
 ]
}

 The dataset includes 4268 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001772-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4kfqt4
title: Occurrence Download

description: A dataset containing 2567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arctocephalus É.Geoffroy Saint-Hilaire & F.Cuvier, 1826"
 ]
}

 The dataset includes 2567 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016247-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.964zar
title: Occurrence Download

description: A dataset containing 271 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Eos bornea (Linnaeus, 1758)"
 ]
}

 The dataset includes 271 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001786-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9wrpim
title: Occurrence Download

description: A dataset containing 15438 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vitellaria paradoxa C.F.Gaertn."
 ]
}

 The dataset includes 15438 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015714-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6xfb78
title: Occurrence Download

description: A dataset containing 346 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dalbergia latifolia Roxb."
 ]
}

 The dataset includes 346 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013571-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xa1cxs
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Anopheles argyritarsis Robineau-Desvoidy, 1827"
 ]
}

 The dataset includes 149 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015724-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7bbry3
title: Occurrence Download

description: A dataset containing 1905719 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sterna hirundo Linnaeus, 1758",
 "Year 2000-2024"
 ]
}

 The dataset includes 1905719 records from 1401 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001609-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15486/ngt/1842465
title: Leaf demography spectra, February 2017, PA-SLZ: Panama

description: This dataset contains leaf reflectance spectra of sunlit canopy leaves from trees at the San Lorenzo Protected Area (PA-SLZ), Panama. Spectra were measured with a full-spectrum (350 -2500 nm) spectroradiometer with a leaf clip attachment. Leaves previously documented in a demography survey were targeted, and each leaf spectrum is paired with species identification, relative leaf position on each branch and estimated leaf age in days. Leaves were measured from the following species: Apeiba membranacea, Carapa guianensis, Guatteria dumetorum, Miconia borealis, Tachigali versicolor, Terminalia amazonia, Tocoyena pittieri and Vochysia ferruginea Unprocessed spectral data are included as SVC *.sig files, and metadata, including sample details, are presented in *.xlsx files. Leaf reflectance spectra of sunlit canopy leaves from trees at the San Lorenzo Protected Area (PA-SLZ), Panama. Spectra were measured with a full-spectrum (350 -2500 nm) spectroradiometer with a leaf clip attachment. Leaves previously documented in a demography survey were targeted, and each leaf spectrum is paired with species identification, relative leaf position on each branch and estimated leaf age in days. Leaves were measured from the following species: Apeiba membranacea, Carapa guianensis, Guatteria dumetorum, Miconia borealis, Tachigali versicolor, Terminalia amazonia, Tocoyena pittieri and Vochysia ferruginea Unprocessed spectral data are included as SVC *.sig files, and metadata, including sample details, are presented in *.xlsx files.
DOI: 10.15486/ngt/1842466
title: Leaf-to-canopy spectral reflectance, February 2018, PA-SLZ: Panama

description: Canopy reflectance spectra of 37 trees were measured at the Smithsonian Tropical Research Institute (STRI) San Lorenzo Protected Area site (PA-SLZ), utilising the canopy access crane to access fully sunlit leaves. Data were recorded in the middle of the day, with 20–50 measurements for each tree. The canopy structure for each crown was captured using a digital camera. Leaf-level reflectance and leaf demographic composition (age class) was recorded in detail for a &gt; 0.5 meter branch sampled from each canopy tree (corresponding to the position where canopy spectra were measured). This dataset includes processed canopy and leaf-level spectral measurements (*.xlsx), raw spectral data (Spectral Evolution PSR+, *.raw, *.sed), sample details (*.xlsx) and *.pdf summaries containing low resolution photographs of the measured canopies. Full resolution images are available in the related dataset, "Leaf-to-canopy spectral reflectance photographs, February 2018, PA-SLZ: Panama".
DOI: 10.15486/ngt/1842523
title: Leaf-to-canopy spectral reflectance photographs, Feb2018, PA-SLZ: Panama

description: Photographs of 37 tree canopies were taken at the Smithsonian Tropical Research Institute (STRI) San Lorenzo Protected Area site, utilising the canopy access crane to view tree crowns. Canopy photos were taken to capture canopy structural information to accompany matching canopy reflectance spectra. Canopy data were recorded in the middle of the day. This collection also includes photographs showing leaf-level detail of branches sampled from each tree, with the photo taken after the branch samples were removed from the trees. These full resolution canopy and branch sample photographs (*.jpg) accompany the dataset "Leaf-to-canopy spectral reflectance, February 2018, PA-SLZ: Panama". Refer to this companion dataset for full metadata, including sample and species information.
DOI: 10.18141/1854129
title: Lithologies and Depositional Environments for the NATCARB Saline Reservoirs

description: This dataset summarize the results of a literature review performed to define the primary lithologies and depositional environments for the target reservoir units defined by the National Carbon Sequestration Database (NATCARB) Saline reservoir 10km Grid data layer, accessible at https://edx.netl.doe.gov/dataset/natcarb. The potential saline storage reservoirs, defined in the Saline 10km Grid layer and in this sheet as "RESOURCE_NAME", were summarized and a literature review was completed to define the primary lithology and depositional environment, and sometimes a secondary lithology and depositional environment for each rock unit. If no verifiable resources were found during the literature review, the primary and secondary lithology and depositional environments were left blank. This file is organized by sheets for each of the 7 Regional Carbon Sequestration Partnerships (RCSP): Big Sky Carbon Sequestration Partnership (BSCSP), the Midwest Geological Sequestration Consortium (MGSC), the Midwest Regional Carbon Sequestration Partnership (MRCSP), the Plains CO₂ Reduction Partnership (PCOR), the Southeast Regional Carbon Sequestration Partnership (SECARB), the Southwest Regional Partnership on Carbon Storage (SWP), and the West Coast Regional Carbon Sequestration Partnership (WESTCARB). The partnerships last updated the NATCARB database in 2015.
DOI: 10.15486/ngt/1855609
title: Simulated tree recruitment at PA-BCI under four precipitation scenarios

description: Simulated recruitment rates are provided for four tropical tree plant functional types (PFTs) which vary in drought and shade tolerance, at Barro Colorado Island, Panama (PA-BCI). Recruitment rates are predicted using the Tree Recruitment Scheme (TRS; Hanbury-Brown et al., 2022) and model data output from the Ecosystem Demography model version 2 with hydrodynamics (ED2; Medvigy et al., 2009, Powell et al., 2018). Predictions of recruitment are provided under four precipitation scenarios: “BASE” = recycled 2008-2014 observed meteorology (Faybishenko & Paton, 2021), “SYN-ENSO” = two exceptionally strong El Niño events within 30 years (Powell et al., 2018), “WET” = 30% increase in precipitation compared to BASE, and DRY-DS = dry season (January–April) precipitation reduced by 75% compared to BASE. In addition to recruitment rates, this dataset provides TRS predictions of PFT-specific seed bank and seedling pool dynamics (tracked in units of carbon) and ED predictions of understory photosynthetically active radiation and soil matric potential at 6 cm soil depth.
DOI: 10.15486/ngt/1862989
title: Model-ready benchmarks for NPP, ANPP, litter fluxes, and recruitment into the 1 cm dbh size class

description: The intended use of this dataset is to serve as an observational benchmark to evaluate model predictions of NPP, ANPP, litter fluxes, and recruitment at Barro Colorado Island, Panama. This dataset contains four CSV files and one text file. “Benchmarks-NPP-ANPP-R-L.csv” provides estimates of annual ecosystem-level reproductive litter flux (R), leaf litter flux (L), aboveground net primary productivity (ANPP), and net primary productivity (NPP) for 61 field plots throughout tropical, temperate, and boreal forest biomes. An additional 499 plots (n = 550) include estimates of just R, L, and R/L. Each row reports a distinct set of estimates for one sampling interval at one plot. “Metadata-Benchmarks-NPP-ANPP-R-L.csv” contains field descriptions for all data fields in “Benchmarks-NPP-ANPP-R-L.csv”. “References-Benchmarks-NPP-ANPP-R-L.txt” contains full references to the original studies used to produce the observations at each plot included in the data. “Benchmarks-Recruitment.csv” provides estimates of species-level recruitment rates into the 1 cm dbh size class at four CTFS-ForestGeo sites using methods that account for unobserved mortality of new recruits between census intervals (Kohyama et al., 2018). “Metadata-Benchmarks-Recruitment.csv” contains field descriptions for all data fields in “Benchmarks-Recruitment.csv”.
DOI: 10.15486/ngt/1866615
title: Leaf C and N content, Feb2016-May2016, PA-SLZ, PA-PNM, PA-BCI: Panama

description: This dataset contains carbon, hydrogen and nitrogen content data of 33 tree species collected from February to May 2016 at the NGEE-Tropics Bosque Protector San Lorenzo (PA-SLZ) and Parque Natural Metropolitano (PA-PNM) sites in Panama. Data from Barro Colorado Island (PA-BCI) is only available for March 2016. This data was collected as part of the 2016 ENSO campaign. See related datasets for further sample details, leaf water potential, leaf spectra, gas exchange and leaf mass per area (LMA). Most leaves were sampled from sunlit canopy trees. VERSION 2 update. The identification of a species from the PNM site has been corrected as follows: the identification of the tree initially identified as Pseudosamanea guachapele (ALBIED) has been revised to Albizia adinocephala (ALBIAD). The updated data package includes revised data, metadata and protocol documents updated to reflect this change.
DOI: 10.15486/ngt/1871026
title: FATES crown damage simulation outputs 2022

description: This dataset contains outputs from the Functionally Assembled Terrestrial Ecosystem Simulator (FATES) and accompanies the paper "Needham, J.F., Arellano, A., Davies, S.J., Fisher, R.A., Hammer, V., Knox, R., Mitre, D., Muller-Landau, H.C., Zuleta, D., Koven, C.D. Tree crown damage and its effects on forest carbon cycling in a tropical forest, 2022, Global Change Biology". Data are unprocessed netcdf file outputs from simulations that were run to test the effect of a new crown damage module in FATES. Specifically, this data package contains a sensitivity analysis to the carbon cushion parameter damage_Ccushion_ensemble_e1b5bd9_bf013ef_2021-09-02.h0.ensemble.sofar.nc, a sensitivity analysis to the root nitrogen stoichiometry parameter damage_Nstoich_ensemble_e1b5bd9_bf013ef_2021-09-02.h0.ensemble.sofar.nc, a sensitivity analysis to parameters controlling crown damage and recovery damage_recovery_ensemble_e1b5bd9_354f0b0_2021-09-02.h0.ensemble.sofar.nc, and a sensitivity analysis to the number of crown damage bins elm_fates_bci_*_damagebins.Eac53ccb80b-F8f994c29.2022-04-19.elm.h0.fullrun.nc. This data package also contains a high root nitrogen configuration of FATES, including both a control, and a crown damage simulation high_root_N_control_e1b5bd9_354f0b0_2021-09-02.clm2.h0.fullrun.nc and high_root_N_damage_e1b5bd9_354f0b0_2021-09-02.clm2.h0.fullrun.nc. There is an analogous low root nitrogen configuration of FATES, including a control, low_root_N_control_e1b5bd9_bf013ef_2021-09-02.clm2.h0.fullrun.nc a damage only simulation low_root_N_damageonly_e1b5bd9_bf013ef_2021-09-02.clm2.h0.fullrun.nc, a damage plus mortality simulation low_root_N_damage_mort_e1b5bd9_bf013ef_2021-09-02.clm2.h0.fullrun.nc, and a mortality only simulation low_root_N_mort_only_e1b5bd9_ef845c8_2021-09-02.clm2.h0.fullrun.nc. Finally, there is a two PFT simulation in which we test the effect of recovery on competitive dynamics, low_root_N_damage_two_pfts_stoichastic_e1b5bd9_bf013ef_2021-09-10.clm2.h0.fullrun.nc. These simulations test the effect of representing crown damage in FATES, compared with simulations that have an equivalent increase in mortality. Jupyter notebooks to analyse these files can be found at https://github.com/JessicaNeedham/Needham_etal_GCB_2022_FATES_crown_damage.
DOI: 10.15468/dl.5qwzkq
title: Occurrence Download

description: A dataset containing 4811 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is naturgucker",
 "TaxonKey is Hyla arborea (Linnaeus, 1758)"
 ]
}

 The dataset includes 4811 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004150-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29hnzq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stenus mikado Hromádka, 1979",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0311062-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3crd8q
title: Occurrence Download

description: A dataset containing 8056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Linum L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (United States of America, Canada)"
 ]
}

 The dataset includes 8056 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0327666-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z87rv7
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xibalbanus tulumensis (Yager, 1987)"
 ]
}

 The dataset includes 77 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004137-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tmk5qp
title: Occurrence Download

description: A dataset containing 1312 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bertholletia excelsa Bonpl."
 ]
}

 The dataset includes 1312 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0177066-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u7urhf
title: Occurrence Download

description: A dataset containing 1749 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quercus stellata Wangenh.",
 "HasCoordinate is true",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 1749 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004154-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7sjwt3
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Occurrence evidence"
 ]
 },
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pterodroma hypoleuca (Salvin, 1888)",
 "Year 1972-2022"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0335498-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pvdvgj
title: Occurrence Download

description: A dataset listing the 67639 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Philippines",
 "HasCoordinate is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 67639 records were derived from 1171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0177073-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jq5s57
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pristimantis angustilineatus (Lynch, 1998))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 108 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055367-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5b9rnj
title: Occurrence Download

description: A dataset containing 469 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anoda Cav.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (United States of America, Canada)"
 ]
}

 The dataset includes 469 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0327699-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u9hr7d
title: Occurrence Download

description: A dataset containing 3912 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Harpia harpyja (Linnaeus, 1758)"
 ]
}

 The dataset includes 3912 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0177067-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.