cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.2qvdhn
title: Occurrence Download

description: A dataset containing 294 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gossypium raimondii Ulbr."
 ]
}

 The dataset includes 294 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011355-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12014814
title: World Stock Prices ( Daily Updating )
DOI: 10.15468/dl.snpegf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maulisia mauli Parr, 1960",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((17.8454 -33.8607,17.8905 -34.1504,17.9648 -34.1504,17.9648 -25.1504,14.3389 -25.1504,14.4725 -26.5137,15.1589 -28.0715,16.3623 -29.3594,16.8947 -30.6715,17.7447 -31.9232,17.8096 -32.2341,17.5192 -32.4186,17.3515 -32.9009,17.8454 -33.8607))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011356-250525065834625/datasets/export for details.
DOI: 10.15468/dl.45gemw
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "Continent is Africa",
 "Country is Benin",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (January, February, March, April, May, June, July, August, September, October)",
 "OccurrenceStatus is Present",
 "TaxonKey is Isoberlinia tomentosa (Harms) Craib & Stapf",
 "Year 2000-2025"
 ]
}

 The dataset includes 23 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011357-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12014819
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.15552684
title: Segregated auditory cortico-striatal pathways regulate distinct components of sensory-driven learning

description: This repository expands the main repository accessible at doi: 10.5281/zenodo.15552693, of the study by Palchaudhuri et al. and provides data for Figure 1 and Figure 2.

This part of the repository contains only zipped data files. Please find the detailed description and the associated metadata in the main repository.
DOI: 10.5281/zenodo.15552685
title: Segregated auditory cortico-striatal pathways regulate distinct components of sensory-driven learning

description: This repository expands the main repository accessible at doi: 10.5281/zenodo.15552693, of the study by Palchaudhuri et al. and provides data for Figure 1 and Figure 2.

This part of the repository contains only zipped data files. Please find the detailed description and the associated metadata in the main repository.
DOI: 10.15468/dl.5ssrwx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maulisia mauli Parr, 1960",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((11.7957 -6.2886,12.3365 -7.1504,17.9648 -7.1504,17.9648 1.8496,9.1702 1.8496,8.9648 1.4824,8.9648 -2.2147,9.212 -2.6876,11.2887 -4.7775,11.6694 -5.4096,11.7957 -6.2886))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011359-250525065834625/datasets/export for details.
DOI: 10.15468/dl.ryg3cs
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Chamaecrista fasciculata (Michx.) Greene",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 658 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011358-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a8n2yy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maulisia mauli Parr, 1960",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((11.2741 -15.6621,11.2727 -16.1504,17.9648 -16.1504,17.9648 -7.1504,12.3365 -7.1504,12.3429 -7.1607,12.8524 -8.4392,12.5237 -8.8791,12.5024 -9.17,13.3428 -11.0863,13.2132 -11.9643,12.6132 -12.4537,12.0505 -13.2857,11.7929 -14.5817,11.546 -15.3352,11.2741 -15.6621))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011360-250525065834625/datasets/export for details.
DOI: 10.15468/dl.8hh9kn
title: Occurrence Download

description: A dataset containing 133585 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Berberis vulgaris L."
 ]
}

 The dataset includes 133585 records from 912 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011349-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g4bhar
title: Occurrence Download

description: A dataset containing 1145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Chamaecrista flexuosa (L.) Greene",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 1145 records from 108 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011361-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29204696
title: Dataset and R code for simulation analyses of evenness-richness correlations

description: The "sim_evenness_geometry" file contains all data for simulating the performances of evenness indices based on the geometric SAD model.The "sim_evenness_gambin" file contains all data for simulating the performances of evenness indices based on the gambin SAD model.The "sim_E-profile_geometry" file contains all data for plotting evenness profiles based on the geometric SAD model.The "sim_E-profile_gambin" file contains all data for plotting evenness profiles based on the gambin SAD model.The "Appendix S2_R code for simulations of evenness indices" file is the R scripts for simulation analyses in "Decoupling species evenness from richness via sampling completeness standardization for robust regional comparisons".
DOI: 10.6084/m9.figshare.29204696.v1
title: Dataset and R code for simulation analyses of evenness-richness correlations

description: The "sim_evenness_geometry" file contains all data for simulating the performances of evenness indices based on the geometric SAD model.The "sim_evenness_gambin" file contains all data for simulating the performances of evenness indices based on the gambin SAD model.The "sim_E-profile_geometry" file contains all data for plotting evenness profiles based on the geometric SAD model.The "sim_E-profile_gambin" file contains all data for plotting evenness profiles based on the gambin SAD model.The "Appendix S2_R code for simulations of evenness indices" file is the R scripts for simulation analyses in "Decoupling species evenness from richness via sampling completeness standardization for robust regional comparisons".
DOI: 10.15468/dl.ryzdzt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maulisia mauli Parr, 1960",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((44.9449 -26.0614,44.9648 -26.0621,44.9648 -25.1504,43.6164 -25.1504,43.93 -25.627,44.5871 -25.7989,44.9449 -26.0614))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011364-250525065834625/datasets/export for details.
DOI: 10.15468/dl.a3wq8v
title: Occurrence Download

description: A dataset containing 2956 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Chamaecrista nictitans (L.) Moench",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 2956 records from 212 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011365-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tupj6t
title: Occurrence Download

description: A dataset containing 28021 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cucumis sativus L."
 ]
}

 The dataset includes 28021 records from 414 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011363-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60555/4h4p-e750
title: Coarsening in Solid-Liquid Mixtures-2 Reflight
title: CSLM-2R

description: The objective of the CSLM-2R investigation was essentially the same as the original CSLM investigation with the focus on lower solid volume percent  samples.
DOI: 10.15468/dl.34dsd7
title: Occurrence Download

description: A dataset containing 244 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonicera tatarica",
 "Country is Estonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 244 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049578-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kmqgnq
title: Occurrence Download

description: A dataset containing 2719 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonicera tatarica",
 "Country is Germany",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2719 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049579-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yqq3ah
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pueraria phaseoloides",
 "Country is Suriname",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024852-250811113504898/datasets/export for details.
DOI: 10.15468/dl.y5m6x6
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-108.8688 22.49913, -108.7188 22.49913, -108.7188 22.64913, -108.8688 22.64913, -108.8688 22.49913))"
 ]
}

 The dataset includes 14 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034078-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17612902
title: Geospatial Data and Analysis Tables for: "Low-intensity urban expansion, high-impact watershed vulnerability in Uberaba, Brazil"

description: This dataset compiles the primary geospatial and tabular data used to analyze the patterns and intensity of urban expansion in Uberaba, Brazil, from 1985 to 2023. The data supports the findings of the associated research article, which investigates the disproportionate impact of low-intensity urban sprawl on specific watersheds and the efficacy of protected areas in containing growth.The collection includes processed and derived data, organized to ensure the reproducibility of the study's spatial and statistical analyses. Key components include:Urban Expansion Shapefiles/Geopackages: Vector layers (e.g., Shapefile, GeoPackage) delineating the annual urban area of Uberaba for the period 1985-2023. These layers were used to calculate the rate and spatial direction of urban sprawl.Watershed Boundaries: Vector files defining the boundaries of the watersheds analyzed in the study .Urban Expansion Intensity Index (UEII) Tables: Excel spreadsheets containing the calculated UEII values for each watershed and time interval, which form the core quantitative evidence of the study's conclusions.Ancillary Maps and Figures: High-resolution image files of key maps and graphics created for the analysis.This dataset provides a valuable resource for researchers studying urban sprawl in medium-sized cities, hydrological vulnerability, land use change modeling, and environmental policy effectiveness in the Global South.Keywords: Urban Expansion; Watershed Vulnerability; Spatial Analysis; Uberaba; Brazil; Land Use Change; Geospatial Data; Environmental Protection Area; Urban Sprawl; GIS
DOI: 10.5281/zenodo.17612901
title: Geospatial Data and Analysis Tables for: "Low-intensity urban expansion, high-impact watershed vulnerability in Uberaba, Brazil"

description: This dataset compiles the primary geospatial and tabular data used to analyze the patterns and intensity of urban expansion in Uberaba, Brazil, from 1985 to 2023. The data supports the findings of the associated research article, which investigates the disproportionate impact of low-intensity urban sprawl on specific watersheds and the efficacy of protected areas in containing growth.The collection includes processed and derived data, organized to ensure the reproducibility of the study's spatial and statistical analyses. Key components include:Urban Expansion Shapefiles/Geopackages: Vector layers (e.g., Shapefile, GeoPackage) delineating the annual urban area of Uberaba for the period 1985-2023. These layers were used to calculate the rate and spatial direction of urban sprawl.Watershed Boundaries: Vector files defining the boundaries of the watersheds analyzed in the study .Urban Expansion Intensity Index (UEII) Tables: Excel spreadsheets containing the calculated UEII values for each watershed and time interval, which form the core quantitative evidence of the study's conclusions.Ancillary Maps and Figures: High-resolution image files of key maps and graphics created for the analysis.This dataset provides a valuable resource for researchers studying urban sprawl in medium-sized cities, hydrological vulnerability, land use change modeling, and environmental policy effectiveness in the Global South.Keywords: Urban Expansion; Watershed Vulnerability; Spatial Analysis; Uberaba; Brazil; Land Use Change; Geospatial Data; Environmental Protection Area; Urban Sprawl; GIS
DOI: 10.34740/kaggle/dsv/12587635
title: English Scam Call Dataset
DOI: 10.34740/kaggle/dsv/13736514
title: CHIMERA_CHESS_v3.0
DOI: 10.5281/zenodo.17576224
title: A high-quality draft genome assembly of the Neotropical butterfly, Batesia hypochlora (Nymphalidae: Biblidinae)

description: Description the dataset for Batesia hypochlora assembly



B_hypochlora-script.zip: it contains all R scripts and bash commands during the assembly for Batesia hypochlora. The command also available at github.com/tanpham15/B_hypochlora 

Wolbachia_in_Batesia.fa: it contains sequences of Wolbachia we found during the assembly

final_mitogenome.fasta: it is the final mitochondrial DNA of Batesia hypochlora

Bathyp_softmasked_genome.fasta: it is final Batesia hypochlora genome (version 1.0)

Batesia_protein_seq_braker_out.faa: it is the Batesia hypochlora protein sequences that we got from braker prediction

Batesia_protein_annotation_longestCDS.gff3: it is genome annotations, including features like gene locations, exon-intron structures, and transcripts when keeping only the longest isoform


# Raw reads: available at the European Nucleotide Archive (PRJEB87368).

# Genome also availabe at NCBI (PRJNA1240833)

# Tree of Life ID: ilBatHypo
DOI: 10.5281/zenodo.17576225
title: A high-quality draft genome assembly of the Neotropical butterfly, Batesia hypochlora (Nymphalidae: Biblidinae)

description: Description the dataset for Batesia hypochlora assembly



B_hypochlora-script.zip: it contains all R scripts and bash commands during the assembly for Batesia hypochlora. The command also available at github.com/tanpham15/B_hypochlora 

Wolbachia_in_Batesia.fa: it contains sequences of Wolbachia we found during the assembly

final_mitogenome.fasta: it is the final mitochondrial DNA of Batesia hypochlora

Bathyp_softmasked_genome.fasta: it is final Batesia hypochlora genome (version 1.0)

Batesia_protein_seq_braker_out.faa: it is the Batesia hypochlora protein sequences that we got from braker prediction

Batesia_protein_annotation_longestCDS.gff3: it is genome annotations, including features like gene locations, exon-intron structures, and transcripts when keeping only the longest isoform


# Raw reads: available at the European Nucleotide Archive (PRJEB87368).

# Genome also availabe at NCBI (PRJNA1240833)

# Tree of Life ID: ilBatHypo
DOI: 10.15468/dl.axedk7
title: Occurrence Download

description: A dataset containing 407727 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Geometry POLYGON((89 27, 91 27, 91 28, 89 28, 89 27))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 407727 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034022-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30625367
title: Data to support Rathod et al. Advanced Science: Microphysiological uremia model reveals biophysical potentiators of vascular dysfunction

description: The data included here is the raw data associated with Rathod et al. Advanced Science 2025 - Microphysiological uremia model reveals biophysical potentiators of vascular dysfunction. Included in this submission is a readme file and data dictionary to facilitate data review.
DOI: 10.6084/m9.figshare.30625367.v1
title: Data to support Rathod et al. Advanced Science: Microphysiological uremia model reveals biophysical potentiators of vascular dysfunction

description: The data included here is the raw data associated with Rathod et al. Advanced Science 2025 - Microphysiological uremia model reveals biophysical potentiators of vascular dysfunction. Included in this submission is a readme file and data dictionary to facilitate data review.
DOI: 10.5281/zenodo.15801848
title: Surface Response of Mercury's Sulfides under Solar Wind Ion Irradiation

description: Datasets of Mg and Ca sulfide samples analyzed for publication "Surface Response of Mercury’s Sulfides under Solar Wind Ion Irradiation" submitted to The Planetary Science Journal.

The data is organized into folders that contain the spectra and spreadsheets that contain the chemical analysis data. 

Folders: the naming structure is "Mineral[_Provider]_EnergyAndSpecies_Spectra"



Mineral: Either CaS or MgS

Provider: For MgS, we used either Zegen Metals&Chemicals (ZMC) or BenchChem (BC)

EnergyAndSpecies: Impacter energy and type

Spectra: Either survey spectra with binding energies from 0-1350 eV or high-resolution spectra of specific elements (Ca, Mg, C, and O)


Spectrum files: Each spectrum is given as a .spe file with the file name of "Mineral_EnergyAndSpecies-XPS-ID.spe".  The files with the "-stats" suffix are repeat measurements to evaluate instrument accuracy. The spectra were fitted in PHI Multipak v9.8. The program includes the instrument-specific sensitivity factors for quantitative analysis. The files can be used in other programmes, such as CasaXPS, following conversion to a VAMAS file. 

Spreadsheets: Includes the composition analysis results and the ion irradiation fluence that corresponds to the .spe file ID. The spreadsheet lists the composition at each fluence state when all spectra are evaluated using the same integration levels for all fluence steps. Furthermore, there are evaluations where the integration steps were adjusted for each fluence step. The single-spectrum evaluations use different primary photoelectron peaks for Ca, Mg, and S. The analysis used in the corresponding publication is the one within the box at the bottom of the sheet.

Reuse of files: We provide these files to allow verification of the chemical analysis presented in the published manuscript. You are free to reuse these spectra to demonstrate the fluence dependency of irradiated CaS and MgS.