cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.9kpktp
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ninox forbesi)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 114 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016381-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n3634f
title: Jackson Pond pollen dataset

description: Raw data for the Jackson Pond pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n3290r
title: Jack London Lake pollen dataset

description: Raw data for the Jack London Lake pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n3hm8x
title: Jacob Lake pollen dataset

description: Raw data for the Jacob Lake pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n3cx3w
title: Jacobson Lake pollen dataset

description: Raw data for the Jacobson Lake pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.7910/dvn/ipkj0z
title: Replication Data for: Against the (Neo)Colonial State: IPOB and the Radical Potential of Secession

description: Dataset/Corpus for STM analysis of Nnamdi Kanu IPOB speeches
DOI: 10.18131/ebnhc-t4872
title: Data for "Assessment of diagenesis in archeological human second metacarpal bones using the intensity of the small angle x-ray scattering D-period peak"

description: The information in this record is for the paper “Assessment of diagenesis in archeological human second metacarpal bones using the intensity of the small angle x-ray scattering D-period peak” published in Journal of the Royal Society Interface in 2025. The data consist of x-ray diffraction patterns (i.e., wide angle x-ray scattering, WAXS, patterns) and of small angle x-ray scattering (SAXS) patterns. The data files are grouped by sample name “HH” plus a sample number. For clarity in the paper’s text, “HH” is replaced by “Gred”, the abbreviated name of the site.

The WAXS data are compressed in GE detector format and are indicated by file type GE2. The SAXS data are zipped using a windows computer. In addition to the patterns from the human archeological second metacarpal bones, there are calibration patterns from ceria “CEO2” for WAXS and “AgBeh” for SAXS.

WAXS information: The nominal sample to detector distance is 1.684375e+03 mm, and the x-ray energy is E = 71.676 keV. The Ge files end with “ge2”. Each GE image is 2048 x 2048 pixels 2 bytes with 8192 byte header in the beginning of the file and can contain multiple frames. The dark file is named “dark”.

 

Calibration files:         

CeO2_1684mm_71pt68keV_omega_0_004017.edf.ge2CeO2_1684mm_71pt68keV_omega_180_004019.edf.ge2 dark_CeO2_1s_004020.edf.ge2

SAXS information: The nominal pixel size is 55 um, and the sample to detector distance is 6500 mm. The images are 16 bit tiffs consisting of 402 x 1024 pixels. The files are designated by “pixirad” in the compressed file name.

Calibration files:          

AgBeh_1s_0deg_029996.tifAgBeh_1s_0deg_030045.tifAgBeh_1s_180deg_030046.tifAgBeh_1s_180deg_030095.tif

The data are shared under the creative commons license type CC BY. Further, all use or re-use of the data must include the acknowledgement to the Advanced Photon Source (APS) included in the paper’s acknowledgements.
DOI: 10.18131/yvswn-etm94
title: Data for "Assessment of diagenesis in archeological human second metacarpal bones using the intensity of the small angle x-ray scattering D-period peak"

description: The information in this record is for the paper “Assessment of diagenesis in archeological human second metacarpal bones using the intensity of the small angle x-ray scattering D-period peak” published in Journal of the Royal Society Interface in 2025. The data consist of x-ray diffraction patterns (i.e., wide angle x-ray scattering, WAXS, patterns) and of small angle x-ray scattering (SAXS) patterns. The data files are grouped by sample name “HH” plus a sample number. For clarity in the paper’s text, “HH” is replaced by “Gred”, the abbreviated name of the site.

The WAXS data are compressed in GE detector format and are indicated by file type GE2. The SAXS data are zipped using a windows computer. In addition to the patterns from the human archeological second metacarpal bones, there are calibration patterns from ceria “CEO2” for WAXS and “AgBeh” for SAXS.

WAXS information: The nominal sample to detector distance is 1.684375e+03 mm, and the x-ray energy is E = 71.676 keV. The Ge files end with “ge2”. Each GE image is 2048 x 2048 pixels 2 bytes with 8192 byte header in the beginning of the file and can contain multiple frames. The dark file is named “dark”.

 

Calibration files:         

CeO2_1684mm_71pt68keV_omega_0_004017.edf.ge2CeO2_1684mm_71pt68keV_omega_180_004019.edf.ge2 dark_CeO2_1s_004020.edf.ge2

SAXS information: The nominal pixel size is 55 um, and the sample to detector distance is 6500 mm. The images are 16 bit tiffs consisting of 402 x 1024 pixels. The files are designated by “pixirad” in the compressed file name.

Calibration files:          

AgBeh_1s_0deg_029996.tifAgBeh_1s_0deg_030045.tifAgBeh_1s_180deg_030046.tifAgBeh_1s_180deg_030095.tif

The data are shared under the creative commons license type CC BY. Further, all use or re-use of the data must include the acknowledgement to the Advanced Photon Source (APS) included in the paper’s acknowledgements.
DOI: 10.21233/n3842n
title: Lake of the Clouds pollen surface sample dataset

description: Raw data for the Lake of the Clouds pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.q34vnh
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Raiamas nigeriensis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 16 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016385-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c9qb4q
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ninox granti)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016384-250802193616735/datasets/export for details.
DOI: 10.15468/dl.kjzyes
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dioscorea alata",
 "Country is Marshall Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016382-250802193616735/datasets/export for details.
DOI: 10.21233/n34f0r
title: Hermit Lake pollen surface sample dataset

description: Raw data for the Hermit Lake pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.yewpfk
title: Occurrence Download

description: A dataset containing 63114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ninox boobook)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 63114 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016358-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n30m88
title: Dolly Sods pollen surface sample dataset

description: Raw data for the Dolly Sods pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.s5dqph
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dioscorea alata",
 "Country is Mozambique",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016383-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16748635
title: Evolutionary fingerprinting of virus proteins

description: This is a repository of data associated with a project ("Evolutionary fingerprinting of virus proteins") with the objective of comparing the pattern of natural selection (via comparative dN/dS analysis) acting on different proteins encoded by the genomes of different virus species, and finding common determinants of those patterns.  All data are derived from NCBI Genbank, with original sources and contributors identified by accession numbers.



step3.tar.gz - a gzip-compressed TAR of all step 3 FASTA files (codon-aligned and manually revised)

step3_md5.txt - MD5 checksums of individual step 3 FASTA files

step5.tar.gz - a gzip-compressed TAR of all step 5 FASTA files (down-sampling to normalize tree lengths)

step5_md5.txt - MD5 checksums of individual step 5 FASTA files

step7.tar.gz - a gzip-compressed TAR of all step 7 FASTA files (removal of sites affected by gene overlap)

step7_md5.txt - MD5 checksums of individual step 7 FASTA files
DOI: 10.21233/n38s6q
title: Canaan Mountain pollen surface sample dataset

description: Raw data for the Canaan Mountain pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n35344
title: Canaan Valley pollen surface sample dataset

description: Raw data for the Canaan Valley pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.18131/vj66c-xhc13
title: GSAS Project Data for "Assessment of diagenesis in archeological human second metacarpal bones using the intensity of the small angle x-ray scattering D-period peak"

description: The information in this record is for the paper “Assessment of diagenesis in archeological human second metacarpal bones using the intensity of the small angle x-ray scattering D-period peak” published in Journal of the Royal Society Interface in 2025. The data consist of x-ray diffraction patterns (i.e., wide angle x-ray scattering, WAXS, patterns) and of small angle x-ray scattering (SAXS) patterns. The data files are grouped by sample name “HH” plus a sample number. For clarity in the paper’s text, “HH” is replaced by “Gred”, the abbreviated name of the site.
DOI: 10.18131/xvkkh-zpx96
title: GSAS Project Data for "Assessment of diagenesis in archeological human second metacarpal bones using the intensity of the small angle x-ray scattering D-period peak"

description: The information in this record is for the paper “Assessment of diagenesis in archeological human second metacarpal bones using the intensity of the small angle x-ray scattering D-period peak” published in Journal of the Royal Society Interface in 2025. The data consist of x-ray diffraction patterns (i.e., wide angle x-ray scattering, WAXS, patterns) and of small angle x-ray scattering (SAXS) patterns. The data files are grouped by sample name “HH” plus a sample number. For clarity in the paper’s text, “HH” is replaced by “Gred”, the abbreviated name of the site.
DOI: 10.21233/n31926
title: Swallow Falls pollen surface sample dataset

description: Raw data for the Swallow Falls pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.4edqvd
title: Occurrence Download

description: A dataset containing 4035 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Pistia stratiotes"
 ]
}

 The dataset includes 4035 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016387-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n3gm8m
title: January Cave [EbPp-Vp] pollen dataset

description: Raw data for the January Cave [EbPp-Vp] pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.94tns6
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Onychomys torridus)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 27 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016390-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n3bx4z
title: James Bay pollen dataset

description: Raw data for the James Bay pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.knupee
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Onychomys torridus)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016389-250802193616735/datasets/export for details.
DOI: 10.21233/n3742b
title: Site 1 (Railton 1973) pollen surface sample dataset

description: Raw data for the Site 1 (Railton 1973) pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.wt8jvn
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Onychomys torridus)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 16 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016388-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16748537
title: Dataset geographical patterns in the distribution of naturalized plants in Central America

description: Geographical patterns in the distribution of naturalized plants in Central America

 

Description of the data and file structure

The dataset includes three files. Two raster files that summarize the occurrence records in a resolution of 5 minutes for naturalized plant species in Central America in a projection WGS84.

The TIF file "Ocurrences_Naturalized_Plantas_in_America_Central.tif" is the number of observations by cell obtained from the Global Biodiversity Information Facility after being filtered following the workflow by Seebens and Kaplan (2022).

Seebens H, Kaplan E (2022) DASCO: A workflow to downscale alien species checklists using occurrence records and to re-allocate species distributions across realms. NeoBiota 74: 75-91 74: 75–91. https://doi.org/10.3897/NEOBIOTA.74.81082  

The TIF file "No_Species_Naturalized_Plantas_in_America_Central.tif" is the number of species by cell obtained from the previous file.

The TXT file [Species_Naturalized_CentralAmerica.txt] is a dataset containing the number of occurrences by country and species, based on the data obtained from GBIF for the Naturalized Plant species searched.

Files and variables

File: Ocurrences_Naturalized_Plantas_in_America_Central.tif

Description: Number of records by cell of naturalized plant species in Central America in a 5-minute resolution and a WGS84 projection.

File: No_Species_Naturalized_Plantas_in_America_Central.tif

Description: Number of species by cell of naturalized plant species in Central America in a 5-minute resolution and a WGS84 projection.

File: Species_Naturalized_CentralAmerica.txt

Description: number of occurrences by country and species, based on the data obtained from GBIF for the Naturalized Plant species searched.

Variables





ID: IF row, each row is a naturalized species reported in a Central American country




Species: Species scientific name of a naturalized plant




Country: A Central American country




Occurrences: number of occurrences by country and species



Access information

Other publicly accessible locations of the data:





By request: edchacon@gmail.com



Data was derived from the following sources:





Global Biodiversity Information Facility (www.gbif.org)