cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9cd92zz
title: Carcass weights, 28S rRNA alignment file and parasite sample vouchers collected from California tiger salamanders (Ambystoma californiense) CTS and Santa Cruz long-toed salamander (Ambystoma macrodactylum croceum) SCLT from Prospect or Ellicott Pond, on Ellicott Slough National Wildlife Refuge, California U.S.A. recorded September 11, 2019

description: Animal identification number, weight in grams for carcasses of California tiger salamanders (Ambystoma californiense) CTS and Santa Cruz long-toed salamander (Ambystoma macrodactylum croceum) SCLT from Prospect or Ellicott Pond, on Ellicott Slough National Wildlife Refuge, California U.S.A. submitted to U.S. Geological Survey, National Wildlife Health Center (NWHC) for determination of cause of death. NWHC Case 29381. MSF Sequence file used to construct a phylogenetic tree. Sequences were generated from samples at NWHC (Px) and using BLAST (https://blast.ncbi.nlm.nih.gov/Blast.cgi) they were compared for base pair similarities with publicly available sequences from GenBank. Sequences selected for the Multi Sequence Fast File (MSF) was based on the number of base pair similarities AND stage of parasite from which the sequence was generated. An excel file listing all parasites and hosts vouchered with the University of New Mexico, Museum of Southwestern Biology, Division of Parasitology.
DOI: 10.5517/ccdc.csd.cc28qm4s
title: CCDC 2107105: Experimental Crystal Structure Determination

description: Related Article: Marcel Härterich, Benedikt Ritschel, Merle Arrowsmith, Julian Böhnke, Ivo Krummenacher, Ashwini K. Phukan, Holger Braunschweig|2021|J.Am.Chem.Soc.|143|18339|doi:10.1021/jacs.1c10131
DOI: 10.5517/ccdc.csd.cc28qm5t
title: CCDC 2107106: Experimental Crystal Structure Determination

description: Related Article: Marcel Härterich, Benedikt Ritschel, Merle Arrowsmith, Julian Böhnke, Ivo Krummenacher, Ashwini K. Phukan, Holger Braunschweig|2021|J.Am.Chem.Soc.|143|18339|doi:10.1021/jacs.1c10131
DOI: 10.5517/ccdc.csd.cc28qm6v
title: CCDC 2107107: Experimental Crystal Structure Determination

description: Related Article: Marcel Härterich, Benedikt Ritschel, Merle Arrowsmith, Julian Böhnke, Ivo Krummenacher, Ashwini K. Phukan, Holger Braunschweig|2021|J.Am.Chem.Soc.|143|18339|doi:10.1021/jacs.1c10131
DOI: 10.5517/ccdc.csd.cc28qm7w
title: CCDC 2107108: Experimental Crystal Structure Determination

description: Related Article: Marcel Härterich, Benedikt Ritschel, Merle Arrowsmith, Julian Böhnke, Ivo Krummenacher, Ashwini K. Phukan, Holger Braunschweig|2021|J.Am.Chem.Soc.|143|18339|doi:10.1021/jacs.1c10131
DOI: 10.5517/ccdc.csd.cc28qm8x
title: CCDC 2107109: Experimental Crystal Structure Determination

description: Related Article: Marcel Härterich, Benedikt Ritschel, Merle Arrowsmith, Julian Böhnke, Ivo Krummenacher, Ashwini K. Phukan, Holger Braunschweig|2021|J.Am.Chem.Soc.|143|18339|doi:10.1021/jacs.1c10131
DOI: 10.5517/ccdc.csd.cc28qm9y
title: CCDC 2107110: Experimental Crystal Structure Determination

description: Related Article: Marcel Härterich, Benedikt Ritschel, Merle Arrowsmith, Julian Böhnke, Ivo Krummenacher, Ashwini K. Phukan, Holger Braunschweig|2021|J.Am.Chem.Soc.|143|18339|doi:10.1021/jacs.1c10131
DOI: 10.5517/ccdc.csd.cc28rdbs
title: CCDC 2107855: Experimental Crystal Structure Determination

description: Related Article: Erwann Grenet, Pierre-Yves Géant, Xavier J. Salom-Roig|2021|Org.Lett.|23|8539|doi:10.1021/acs.orglett.1c03237
DOI: 10.5517/ccdc.csd.cc28cply
title: CCDC 2096610: Experimental Crystal Structure Determination

description: Related Article: Yanan Liu, Yu Fan, Chaoyi Hou, Wei Du, Dan Zhang, Yu Liu, Jiaqiang Xu, Yue-Ling Bai|2021|Inorg.Chem.|60|16370|doi:10.1021/acs.inorgchem.1c02185
DOI: 10.5517/ccdc.csd.cc28cpn0
title: CCDC 2096612: Experimental Crystal Structure Determination

description: Related Article: Yanan Liu, Yu Fan, Chaoyi Hou, Wei Du, Dan Zhang, Yu Liu, Jiaqiang Xu, Yue-Ling Bai|2021|Inorg.Chem.|60|16370|doi:10.1021/acs.inorgchem.1c02185
DOI: 10.25345/c5kz9v
title: MassIVE MSV000088326 - Systems-wide adaptations in Arabidopsis thaliana plant lines grown in 1g and in microgravity environments, ISS Flight 2
title: This research used Arabidopsis thaliana, aiming to identify systems-wide adaptations when plant lines are grown in 1g and microgravity environments. Both leaf and stem samples of WT plants and arogenate dehydratase mutants (adt5, adt45, adt3456) as well as carbon capturing mutants WTCCM and adt3456CCM were grown and analyzed for two separate repeat experiments on board the International Space Station (ISS) as compared to plants grown at 1 g at Kennedy Space Center (KSC). These two experiments are named Flight 1 and Flight 2. This work builds upon our recent progress in a) modulating lignin contents and vascular apparatus performance, via manipulating the arogenate dehydratase (ADT) multi-gene family, and b) enhancing carbon concentrating mechanisms (CCMs) to improve photosynthetic carbon assimilation and water use efficiency (WUE), alone and/or in combination with altered lignin levels. The knowledge gained will be essential for optimizing plants for spaceflight exploration and utilization (such as on Moon or Mars bases), as well as gaining new insights and knowledge into the various network interdependencies including, for example, photo-/gravi-tropisms, lignification, and WUE. Samples were digested with trypsin, labeled with 8-plex iTRAQ, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
DOI: 10.5281/zenodo.5651391
title: Data for chapter 'The impacts of the 2019-20 wildfires on Australian fungi ' in 'Australia's 2019-20 megafires: biodiversity impacts and lessons for the future'

description: <strong>Dataset includes raw data downloaded from the following sources:</strong> Atlas of Living Australia occurrence download: https://doi.org/10.26197/ala.9e0ca388-9da2-4096-b1a3-26e2aaa51d8a. Accessed 2021-09-16. GBIF.org (16 September 2021) GBIF Occurrence Download https://doi.org/10.15468/dl.secenk Fungimap (https://fungimap.org.au/ (data obtained directly from Fungimap Inc.) MycoPortal (https://mycoportal.org/portal/index.php) iNaturalist (https://www.inaturalist.org/home)
description: Accompanying code for analysis using this dataset is available at https://github.com/payalbal/fungi-fire
DOI: 10.6084/m9.figshare.16944664
title: Myhub

description: epigenetic features for a machine learning prediction website of sgRNA activity score.
DOI: 10.6084/m9.figshare.16944664.v1
title: Myhub

description: epigenetic features for a machine learning prediction website of sgRNA activity score.
DOI: 10.6084/m9.figshare.14813760.v1
title: Comments on the Theory of Complex XPS Spectra: Extracting Chemical Information from the Fe 3p XPS of Fe Oxides

description: XPS analyses of open shell ionic compounds, especially oxides of the first row transition metals, for information such as oxidation state tend to focus on characteristics of the metal 2p XPS features alone. These analyses could be made considerably more robust with simultaneous characterization of the XPS of the metal 3p features as well as the 2p features. In these comments, we provide a perspective on the conceptual and theoretical framework needed to extract chemical information from the complex multiplet structure of the 3p XPS of Fe oxides as representative of 3d transition metal oxides. We also present information about a novel kind of many-body effects that may contribute to a further redistribution of the Fe 3p XPS intensity. The concern here is not to develop a complicated mathematical formalism but to explain the complexity in terms of fundamental quantum mechanical concepts. This is done on the basis of <i>ab initio</i> Dirac Hartree–Fock wavefunctions where we examine the physical nature of the 3p XPS features of the representative ferrous and ferric oxides of FeO and Fe<sub>2</sub>O<sub>3</sub>, respectively. The key objectives of this paper are as follows: (1) to demonstrate the importance of the angular momentum coupling of open shell electrons, which is done more easily with RS multiplets; (2) to show that a single configuration description of the final state multiplets is woefully inadequate; (3) to identify a novel atomic many-body effect that can lead to a rich satellite structure. The considerations discussed here should have implications for making useful interpretations of the XPS of lower BE levels of other ionic, high spin materials. This paper provides a manifestation of a new tradition by which <i>Comments on Inorganic Chemistry</i> starts publishing original research content that, nonetheless, preserves the Journal’s identity as a niche for critical discussion of contemporary literature in inorganic chemistry; for previous manifestations, see <i>Comments Inorg. Chem</i>. <b>2020</b>, <i>40</i>, 277–303 and references cited in the abstract thereof.
DOI: 10.6084/m9.figshare.14813760
title: Comments on the Theory of Complex XPS Spectra: Extracting Chemical Information from the Fe 3p XPS of Fe Oxides

description: XPS analyses of open shell ionic compounds, especially oxides of the first row transition metals, for information such as oxidation state tend to focus on characteristics of the metal 2p XPS features alone. These analyses could be made considerably more robust with simultaneous characterization of the XPS of the metal 3p features as well as the 2p features. In these comments, we provide a perspective on the conceptual and theoretical framework needed to extract chemical information from the complex multiplet structure of the 3p XPS of Fe oxides as representative of 3d transition metal oxides. We also present information about a novel kind of many-body effects that may contribute to a further redistribution of the Fe 3p XPS intensity. The concern here is not to develop a complicated mathematical formalism but to explain the complexity in terms of fundamental quantum mechanical concepts. This is done on the basis of <i>ab initio</i> Dirac Hartree–Fock wavefunctions where we examine the physical nature of the 3p XPS features of the representative ferrous and ferric oxides of FeO and Fe<sub>2</sub>O<sub>3</sub>, respectively. The key objectives of this paper are as follows: (1) to demonstrate the importance of the angular momentum coupling of open shell electrons, which is done more easily with RS multiplets; (2) to show that a single configuration description of the final state multiplets is woefully inadequate; (3) to identify a novel atomic many-body effect that can lead to a rich satellite structure. The considerations discussed here should have implications for making useful interpretations of the XPS of lower BE levels of other ionic, high spin materials. This paper provides a manifestation of a new tradition by which <i>Comments on Inorganic Chemistry</i> starts publishing original research content that, nonetheless, preserves the Journal’s identity as a niche for critical discussion of contemporary literature in inorganic chemistry; for previous manifestations, see <i>Comments Inorg. Chem</i>. <b>2020</b>, <i>40</i>, 277–303 and references cited in the abstract thereof.
DOI: 10.15151/esrf-es-541045424
title: Russian BAG for Xtallography and BioSAXS
DOI: 10.15151/esrf-es-541095828
title: BAG BARCELONA

description: BAG Barcelona is constituted by 9 groups that belong to the Institute of Molecular Biology Barcelona from the Spanish Research Council (IBMB-CSIC), the Institute for Research in Biomedicine (IRB), and the Research Institute from Hospital Santa Creu i Sant Pau (HSCSP-IR). The main subjects of research are protein/DBA complexes, molecular machines, compounds of viruses, and the molecular mechanisms of proteases and other enzymes. Our Scientific results strongly rely on the high quality data and excellent performance and support of ESRF macromolecular crystallography beamlines.
DOI: 10.15151/esrf-es-541412615
title: Austrian Crystallographic Diffraction Consortium

description: This proposed Austrian Crystallographic Diffraction Consortium (ACDC) BAG is to support various macromolecular structural biology groups across Austria (totally 15 research groups at 8 institutions in 5 cities). We employ mainly the technique of X-ray crystallography to characterize macromolecular biological complexes. Approval of this BAG will be absolutely essential for researchers in all these groups to carry out their structural studies on various health-related subjects, which are targeted at characterizing large molecular assemblies or proteins currently under-represented in the PDB, including membrane proteins. Corresponding high-resolution diffraction data are only obtainable through the use of synchrotron radiation sources. Thus regular synchrotron access is highly desirable to maintain a competitive advantage in our individual research fields.
DOI: 10.15151/esrf-es-542560700
title: Molecular machines in energy transduction, cellular signaling and defense processes

description: Within this BAG we are focussing mainly on three topics: 1.) proteins that use the energy of light, ATP, GTP or NADH to perform essential biological functions, either embedded in the membrane or in the cytosol 2.) proteins of different essential signaling or metabolic processes in plants like the ethylene pathway or the nitrogen metabolism 3.) proteins involved in the immune system of prokaryotic bacteria and plants or associated with diseases like cancer or developmental disorders
DOI: 10.15151/esrf-es-551709232
title: Novel photonic and phononic materials with complex bicontinuous morphologies

description: The objective of this work is to study the structure and properties of a new family of triblock copolymer materials with extremely high molecular weight of blocks for applications as photonic and phononic crystals. It is noteworthy that these materials enable fabrication of low-cost and very effective polymer coatings for applications in photonic coatings and organic electronics as both photonic and phononic band gap materials. In the proposed experiment, we will address the structure of the new type of polymer materials based on linear ABC block copolymers and asymmetrical star-based copolymers forming cubic bicontinuous phase-separated morphologies with very large lattice constants, such as single or double gyroid, core-shell gyroid and diamond. In addition to the all-polymer samples we are planning to study polymer nanocomposites filled with various nanoparticles of inorganic or metallic nature which will increase the dielectric contrast between the domains.
DOI: 10.15151/esrf-es-549494442
title: Internal temperature and state-of-charge mapping for automotive lithium-ion batteries using ultra-fast P-XRD-CT

description: Fast-charging Li-ion cells that are sufficiently power dense while also durable and safe will increase the competitiveness of battery electric vehicles (BEVs). To achieve this, the local state-of-charge (SoC_ and temperature must be sufficiently controlled. However, in practice this is highly challenging and informed design from experimental feedback is not possible as invasive methods are required to obtain such information. In these experiments we will employ ultra-fast powder X-ray diffraction computed tomography to monitor the crystallography of the current collectors and electrodes within operating lithium-ion batteries to map the temperature and SoC in real-time. These experiments would be the first of the report of dual-temperature and SoC mapping during operation and the findings will have immediate tangible impacts upon our fundamental understandings of battery operation for researchers, as well as providing much needed insight for cell designers within the commercial sphere.
DOI: 10.5281/zenodo.5642953
title: A long-term 250-m resolution Normalized Difference Vegetation Index (NDVI) product for 1982–2020 in Idaho

description: We developed a novel spatio-temporal fusion method to downscale the AVHRR NDVI products to the Moderate-resolution Imaging Spectroradiometer (MODIS) resolution. The algorithm effectively combines the high spatial variability of the MODIS NDVI data and the long-term temporal information of the AVHRR NDVI data. Finally, we successfully generated a monthly global long-term (since 1982) and high-resolution (250m) NDVI database. Here we provide the downscaled NDVI dataset of Idaho from 1982 to 2020. Datasets for other regions can be easily produced by the GEE platform with the code provided in the github (https://github.com/babyfoal/downsclaed_NDVI/tree/main). The spatial distribution and temporal variation of this dataset have been both well validated by the simulated and real-data experiments.
DOI: 10.5281/zenodo.5642508
title: A long-term 250-m resolution Normalized Difference Vegetation Index (NDVI) product for 1982–2020 in Idaho

description: We developed a novel spatio-temporal fusion method to downscale the AVHRR NDVI products to the Moderate-resolution Imaging Spectroradiometer (MODIS) resolution. The algorithm effectively combines the high spatial variability of the MODIS NDVI data and the long-term temporal information of the AVHRR NDVI data. Finally, we successfully generated a monthly global long-term (since 1982) and high-resolution (250m) NDVI database. Here we provide the downscaled NDVI dataset of Idaho from 1982 to 2020. Datasets for other regions can be easily produced by the GEE platform with the code provided in the github (https://github.com/babyfoal/downsclaed_NDVI/tree/main). The spatial distribution and temporal variation of this dataset have been both well validated by the simulated and real-data experiments.
DOI: 10.6084/m9.figshare.16944799
title: DNA methylation silencing gene.zip

description: <b>DNA methylation and gene expression in malignant transformation of human bronchial epithelial cells induced by glycidyl methacrylate</b><b></b>
DOI: 10.6084/m9.figshare.16944808
title: Supplementary data for black carbon in sediments from hadal trench regions

description: The concentration, 13C and 14C isotopes of black carbon in sediments from six trench regions<br>
DOI: 10.5281/zenodo.5651453
title: Temperature measurements at Saint Thomas and Saint Philip Neri church

description: This dataset contains temperature measurements in Celsius degrees collected at the church of Saint Thomas and Saint Philip Neri in Valencia (Spain) by multiple wireless sensors. The data were collected from August 2017 to March 2019 and aligned at the same time point using linear interpolation.
DOI: 10.5281/zenodo.5651452
title: Temperature measurements at Saint Thomas and Saint Philip Neri church

description: This dataset contains temperature measurements in Celsius degrees collected at the church of Saint Thomas and Saint Philip Neri in Valencia (Spain) by multiple wireless sensors. The data were collected from August 2017 to March 2019 and aligned at the same time point using linear interpolation.
DOI: 10.6084/m9.figshare.16944811
title: FBB Supplementary Files

description: <b>Supplementary File 1</b>. Pilon polishing round results.<b>Supplementary File 2</b>. Liftoff analysis results of IBP_PD630 genes mapped over FABIT_PD630 assembly using increasing coverage and identity thresholds: i) 100% coverage and identity, ii) 95% coverage and identity, and iii) 90% coverage and identity.
DOI: 10.6084/m9.figshare.13551269
title: Disdrometer Data in Chongqing from Jan. 2015 to Jan. 2016

description: This is the data reorganized from the origin Parsivel disdrometer output. The data consists of the instrument working time and 32*32 numbers. Each number corresponds to raindrops quantity in a size class (row) and a terminal velocity class (column).The size classes:/0.000, 0.125, 0.250, 0.375, 0.500, 0.625, 0.750, 0.875, 1.000, 1.125, & 1.250, 1.500, 1.750, 2.000, 2.250, 2.500, 3.000, 3.500, 4.000, 4.500, & 5.000, 6.000, 7.000, 8.000, 9.000, 10.00, 12.00, 14.00, 16.00, 18.00, & 20.00, 23.00 /The velocity classes: /0.000, 0.100, 0.200, 0.300, 0.400, 0.500, 0.600, 0.700, 0.800, 0.900, & 1.000, 1.200, 1.400, 1.600, 1.800, 2.000, 2.400, 2.800, 3.200, 3.600, & 4.000, 4.800, 5.600, 6.400, 7.200, 8.000, 9.600, 11.20, 12.80, 14.40, & 16.00, 19.20 /
DOI: 10.6084/m9.figshare.13551269.v6
title: Disdrometer Data in Chongqing from Jan. 2015 to Jan. 2016

description: This is the data reorganized from the origin Parsivel disdrometer output. The data consists of the instrument working time and 32*32 numbers. Each number corresponds to raindrops quantity in a size class (row) and a terminal velocity class (column).The size classes:/0.000, 0.125, 0.250, 0.375, 0.500, 0.625, 0.750, 0.875, 1.000, 1.125, & 1.250, 1.500, 1.750, 2.000, 2.250, 2.500, 3.000, 3.500, 4.000, 4.500, & 5.000, 6.000, 7.000, 8.000, 9.000, 10.00, 12.00, 14.00, 16.00, 18.00, & 20.00, 23.00 /The velocity classes: /0.000, 0.100, 0.200, 0.300, 0.400, 0.500, 0.600, 0.700, 0.800, 0.900, & 1.000, 1.200, 1.400, 1.600, 1.800, 2.000, 2.400, 2.800, 3.200, 3.600, & 4.000, 4.800, 5.600, 6.400, 7.200, 8.000, 9.600, 11.20, 12.80, 14.40, & 16.00, 19.20 /
DOI: 10.3886/e119981v1-100860
title: The Impact of Renewable Energy Investment on Economic Growth

description: The study aimed to define and assess the impact of renewable energy on economic growth. It used panel data for 18 countries during the period 2008-2015. The FMOLS econometric technicality was used to estimate the relevant relations between the independent variables, namely; renewable energy, capital, labor and trade openness and the dependent variable, real GDP per capita. The study found that renewable energy affects economic growth positively, however, the elasticity was highly inelastic. Also, the study found positive and significant relationships between economic growth and the other three independent variables with inelastic elasticities.<br><br>The study concluded that countries should be encouraged to invest in renewable energy and gradually decrease their dependence on conventional energy. Also, it highly recommended to remove all obstacles facing the development of renewable energy.
DOI: 10.5281/zenodo.5651494
title: Semi-regular Duck - Shell-lattice construction based on regular and semi-regular tiling via functional composition.

description: This duck has been created using tools and algorithms developed at the Technion, and are part of the IRIT geometric modeling kernel (https://www.cs.technion.ac.il/~irit/). This specific duck model has been created using function composition of dual semi-regular tiles over the shell geometry of a B-spline bivariate duck. This model is provided in STL file format.
description: In part with funding from the Defense Advanced Research Projects Agency (DARPA), under contract HR0011-17-2-0028. The views, opinions and/or findings expressed are those of the author and should not be interpreted as representing the official views or policies of the Department of Defense or the U.S. Government.
DOI: 10.6084/m9.figshare.16944901
title: Shanghai Housing Data

description: Shanghai Housing Data
DOI: 10.6084/m9.figshare.16944913
title: Supplementary Material - Ornithology in Spain: an update descriptive overview trough doctoral theses defended in last decades

description: ´This supplementary material gathered the theses reviews published in the section Review of Doctoral Theses in Ornithology in Ardeola: International Journal of Ornithology between 1990-2019 which have been used to carried out the study. The theses reviews are grouped by university and, within each university, by academic year and alphabetical order of the author.<br>