cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9598835.v1
title: Physicians’ commuting in five health regions in São Paulo, Brazil: patterns and intervening factors

description: The article aims to analyze physicians’ commuting from a new perspective, verifying their movement and work supply between health regions, specifically in five regions in the state of São Paulo, Brazil. This movement was referred to as physicians’ commuting, defined as the diversity of job situations over the course of a given time period in given geographic territories. The methodology used was a multiple case study with quantitative and qualitative approaches. All the physicians registered in the National Registry of Healthcare Establishment (CNES) in March 2015 were categorized as either “exclusive physicians”, with employment contracts exclusively in the target health region or “non-exclusive physicians”, with employment contracts both in that region and in other regions. We analyzed the region’s socioeconomic and health characteristics and healthcare structure. The region’s dependence on external physicians, namely those residing in other regions, varied from 30 to 40%; dependence was higher in the more economically developed regions and less in the less developed regions. Internal dependence, among municipalities, was close to 40% in the regions with higher economic development and reached 60% in the less developed regions. Non-exclusive physicians tended to be more specialized, working more in surgical and diagnostic specialties, while exclusive physicians worked more in basic and clinical specialties, suggesting that the commuting patterns are associated with the organization of different arrangements of healthcare provision. We identified a growing share of outsourced arrangements and the importance of regionally negotiated actions. Such studies can better orient more integrated redistributive policies.
DOI: 10.6084/m9.figshare.9598826
title: Oxone®-Mediated Direct α-Hydroxylation of β-Dicarbonyl Compounds: Racemic Synthesis of Harzialactone A

description: An environmentally benign method is described for the α-hydroxylation of malonates and cyclic analogues in aqueous medium at room temperature under mild conditions, based on the in situ generation of dimethyldioxirane through the combination of acetone and Oxone®. This procedure was found to be substrate-dependent and was successfully performed to provide α-hydroxylated γ-lactones. To demonstrate the synthetic potential of this mild α-hydroxylation, two different concise routes were developed to synthesize harzialactone A in the racemic form with a moderate (3:1) diastereomeric ratio.
DOI: 10.6084/m9.figshare.9598829.v1
title: Evaluation of water quality in fee-fishing ponds located in Guarapiranga’s sub basin, Upper Tietê River basin, São Paulo State

description: Abstract This study intended to characterize the fee-fishing ponds located in Guarapiranga's sub-basin both in terms of structure and environmental conditions. The studied region was mapped and 15 out of 24 georeferenced fee-fishing ponds had their owners interviewed through semi-structured questionnaires. In addition to that, samples were collected from the seven fee-fishing ponds closest to the reservoir throughout a seasonal cycle divided in four sample collections carried out between November 2013 and August 2014, aiming at measuring the following variables in situ: water flow rates, pH, turbidity, electrical conductivity and dissolved oxygen concentration in affluents and effluents. Other samples were taken in order to assess total phosphorus (TP) and total nitrogen (TN) concentrations. Our results show a decrease in dissolved oxygen concentration along with an increase in TP and TN concentration in effluents, as compared to affluents. TP e TN concentrations exceeded the permitted values established by CONAMA 357/2005 – Class II resolution in all effluents at least during part of the year. High nutrient levels were observed in affluents, condition with which basins that have been affected by population growth are commonly met. It was verified, by interviewing the owners regarding venture management and by analyzing the collected samples, that there is significant correlation between the daily feeding and the TP and TN levels (p=0.021 and p=0.045, respectively), with the ponds where feeding is more intense having showed the highest nutrient levels in their effluents. The results highlight the importance of mitigation measures such as educating the owners on proper water management, the installation of pond aerators in conjunction with tanks the filters of which shall be composed of aquatic macrophytes in their effluents, as well as awareness campaigns aiming to reduce the usage of dough by fishermen in order to minimize detrimental impacts on Guarapiranga’s sub-basin.
DOI: 10.6084/m9.figshare.9598820
title: Droplet Size Distribution in Water-Crude Oil Emulsions by Low-Field NMR

description: This paper reports the droplet size distribution (DSD) measurements in 28 W/O (water/oil) crude oil emulsions prepared with two Brazilian oils (medium and heavy) under different shear conditions using both 10 g L-1 NaCl solution and water production by low field nuclear magnetic resonance (NMR, 2.2 MHz). The PFGSTE (pulsed-field gradient-stimulated echo) pulse sequence applied was able to separate the crude oil emulsion signal for both medium and heavy oil even for low dispersed phase content (1.51 wt.%) and took into account only the aqueous phase signal. All emulsions exhibited an average diameter smaller than 5.5 µm because of the severe shear conditions. Despite the difficult processing of the S24 (6.48 wt.%) emulsion signal, good agreement was achieved between low field NMR and low-angle laser light scattering (LALLS) results. Finally, the paramagnetic ions in the water production did not affect the NMR measurements, demonstrating its applicability for analyzing real emulsions.
DOI: 10.6084/m9.figshare.9598826.v1
title: Oxone®-Mediated Direct α-Hydroxylation of β-Dicarbonyl Compounds: Racemic Synthesis of Harzialactone A

description: An environmentally benign method is described for the α-hydroxylation of malonates and cyclic analogues in aqueous medium at room temperature under mild conditions, based on the in situ generation of dimethyldioxirane through the combination of acetone and Oxone®. This procedure was found to be substrate-dependent and was successfully performed to provide α-hydroxylated γ-lactones. To demonstrate the synthetic potential of this mild α-hydroxylation, two different concise routes were developed to synthesize harzialactone A in the racemic form with a moderate (3:1) diastereomeric ratio.
DOI: 10.6084/m9.figshare.9598832.v1
title: Neoplastic patients’ knowledge about intestinal parasitoses in southern Brazil

description: Abstract Since oncologic patients have been considered an important risk group for parasitic infections, it is fundamental to find out what they know about intestinal parasites. This study aimed at evaluating knowledge that the adult oncologic patients undergoing chemotherapy in the main centers of treatment for cancer in the city of Pelotas, Brazil, has about intestinal parasites. A semi-structured questionnaire was used for collecting data from two hundred oncologic patients who were undergoing chemotherapy. Results showed that 69.5% know what intestinal parasites are and cited Ascaris lumbricoides and Taenia sp. as being the most known ones. The statistical comparison between the group that knows intestinal parasites and the one that does not know about them – associated with socioeconomic variables –, showed that factors that significantly influenced their knowledge were their place of residence, schooling and household income (p≤0.05). Only 36% stated that they know when they are infected with parasites and misdescribed some signs and symptoms. Regarding prevention, 52% mentioned that they do not know how to avoid parasitism. The population under study showed that there are some gaps in its knowledge of the theme under investigation. Therefore, it is important to implement socioeducational measures in hospitals and clinics that treat cancer patients.
DOI: 10.6084/m9.figshare.9598820.v1
title: Droplet Size Distribution in Water-Crude Oil Emulsions by Low-Field NMR

description: This paper reports the droplet size distribution (DSD) measurements in 28 W/O (water/oil) crude oil emulsions prepared with two Brazilian oils (medium and heavy) under different shear conditions using both 10 g L-1 NaCl solution and water production by low field nuclear magnetic resonance (NMR, 2.2 MHz). The PFGSTE (pulsed-field gradient-stimulated echo) pulse sequence applied was able to separate the crude oil emulsion signal for both medium and heavy oil even for low dispersed phase content (1.51 wt.%) and took into account only the aqueous phase signal. All emulsions exhibited an average diameter smaller than 5.5 µm because of the severe shear conditions. Despite the difficult processing of the S24 (6.48 wt.%) emulsion signal, good agreement was achieved between low field NMR and low-angle laser light scattering (LALLS) results. Finally, the paramagnetic ions in the water production did not affect the NMR measurements, demonstrating its applicability for analyzing real emulsions.
DOI: 10.6084/m9.figshare.9598808
title: Prunus mira genes in fasta format

description: Gene mRNA sequences from the transcriptome sequencing in Prunus mira.<br>
DOI: 10.6084/m9.figshare.9598817
title: Readmission of Patients with Acute Coronary Syndrome and Determinants

description: Abstract Background: Acute coronary syndrome (ACS) is responsible for high rates of hospital admission and readmission, which are associated with increased costs for the patient and the health system, and increased in-hospital mortality rates. Objective: To evaluate readmission in patients with ACS and its determinants. Methods: This was a retrospective cohort study of adult and elderly patients with ACS, readmitted to public and private referral cardiology hospitals within one year after the first hospitalization for ACS. The occurrence of readmissions, the time elapsed from the first to the second admission, and the use of medications at admission were collected from the medical records. Associations between categorical variables were evaluated by the chi-square test or the Fisher's exact test. Multiple logistic regression was used to evaluate predictors for readmissions. A p &lt; 0.05 was set as statistically significant. Results: Readmission rate was 21.5% (n = 115) and mean time between admissions was 122.7 ± 112.1 days. The patients were mostly men (64.0%), mean age of 63.15 ± 12.3 years. Among readmitted patients, 7% had a prognosis of "death", and 68.7% were readmitted more than once within a one-year period. The main reasons of readmission were cardiovascular diseases including ACS. Private health care and the diagnosis of congestive heart failure were associated with multiple logistic regression. Conclusion: ACS was the main cause of readmission, with higher prevalence among users of supplemental health care. Readmissions were associated with previous diagnosis of congestive heart failure and the type of health care provided.
DOI: 10.6084/m9.figshare.9598817.v1
title: Readmission of Patients with Acute Coronary Syndrome and Determinants

description: Abstract Background: Acute coronary syndrome (ACS) is responsible for high rates of hospital admission and readmission, which are associated with increased costs for the patient and the health system, and increased in-hospital mortality rates. Objective: To evaluate readmission in patients with ACS and its determinants. Methods: This was a retrospective cohort study of adult and elderly patients with ACS, readmitted to public and private referral cardiology hospitals within one year after the first hospitalization for ACS. The occurrence of readmissions, the time elapsed from the first to the second admission, and the use of medications at admission were collected from the medical records. Associations between categorical variables were evaluated by the chi-square test or the Fisher's exact test. Multiple logistic regression was used to evaluate predictors for readmissions. A p &lt; 0.05 was set as statistically significant. Results: Readmission rate was 21.5% (n = 115) and mean time between admissions was 122.7 ± 112.1 days. The patients were mostly men (64.0%), mean age of 63.15 ± 12.3 years. Among readmitted patients, 7% had a prognosis of "death", and 68.7% were readmitted more than once within a one-year period. The main reasons of readmission were cardiovascular diseases including ACS. Private health care and the diagnosis of congestive heart failure were associated with multiple logistic regression. Conclusion: ACS was the main cause of readmission, with higher prevalence among users of supplemental health care. Readmissions were associated with previous diagnosis of congestive heart failure and the type of health care provided.
DOI: 10.6084/m9.figshare.9598799
title: Prunus mira gene annotation file

description: Gene annotation of Prunus mira transcriptome<br>
DOI: 10.6084/m9.figshare.9598808.v1
title: Prunus mira genes in fasta format

description: Gene mRNA sequences from the transcriptome sequencing in Prunus mira.<br>
DOI: 10.6084/m9.figshare.9598760
title: Biomedical Word Vectors

description: 100-Dimensional Word Embedding Vectors Generated using GloVe and MEDLINE, a repository of biomedical pulication abstracts.
DOI: 10.6084/m9.figshare.9598709
title: Appendix B Chapter IV: CLIMATIC DRIVERS OF AVIAN SPECIES RICHNESS ACROSS THE ANDES

description: Lower and upper elevational limits and Raw data base extracted from 16 elevational gradients. <br>5.- Table S1. Lower and upper elevational limits of 2191 species recorded among 16 plots across the Andes. Taxonomic names and ranges are primary based on IUCN redlist 2019 ranges and Quintero & Jetzs 2018. <br>6.- Table S2. Raw data base extracted from 16 elevational gradients (~1000 points/site) across the Andes.<br>
DOI: 10.6084/m9.figshare.9598694
title: DataBase, Chapter III: DRIVERS OF AVIAN DIVERSITY ALONG THE WESTERN SLOPE OF THE CENTRAL ANDES AND IMPLICATIONS FOR CLIMATE CHANGE

description: Refer to methods in Sevillano-Rios Steven and Amanda Rodewald: Chapter III <br>DRIVERS OF AVIAN DIVERSITY ALONG THE WESTERN SLOPE OF THE CENTRAL ANDES AND IMPLICATIONS FOR CLIMATE CHANGE
DOI: 10.6084/m9.figshare.9598694.v1
title: DataBase, Chapter III: DRIVERS OF AVIAN DIVERSITY ALONG THE WESTERN SLOPE OF THE CENTRAL ANDES AND IMPLICATIONS FOR CLIMATE CHANGE

description: Refer to methods in Sevillano-Rios Steven and Amanda Rodewald: Chapter III <br>DRIVERS OF AVIAN DIVERSITY ALONG THE WESTERN SLOPE OF THE CENTRAL ANDES AND IMPLICATIONS FOR CLIMATE CHANGE
DOI: 10.6084/m9.figshare.9598406
title: Main dataset from Steinmetz et al. 2019

description: <b>Main dataset from Steinmetz et al. 2019. </b><br><i>Companion code located at </i>https://github.com/nsteinme/steinmetz-et-al-2019<i>.</i><i><br></i><i>Raw behavioral movies located here: </i>https://doi.org/10.6084/m9.figshare.9702302<i><br></i><i>Raw local field potential data located here: </i>https://doi.org/10.6084/m9.figshare.9727895<br><i>Data also accessible via Open Neurophysiology Environment (</i>https://figshare.com/articles/steinmetz/9974357<i>) and in Neurodata Without Borders format (</i>https://doi.org/10.6084/m9.figshare.11274968<i>). </i><br>This dataset contains both spiking and behavioral data. <br>Spiking data is provided after spike sorting.<br>Behavioral data includes wheel movements, pupil area and position, stimulus information, choice information. <br>Detailed information about the files provided can be found here: https://github.com/nsteinme/steinmetz-et-al-2019/wiki/data-files<br>When extracting the zip file provided here, you will get "allData.tar", then extract that tar file to get individual .tar files for each recording, and then extract each of these. It is convenient to do this last step using WinRAR in Windows by selecting all, right-clicking on one of them, and choosing "extract each to separate folder". <br><br>
DOI: 10.6084/m9.figshare.9598040
title: Andhra-JBug18 Hybrids--raw Sanger sequencing reads

description: Raw Sanger sequencing reads for a set of 18 bacteriophage hybrids harboring genome sequences derived from <i>S. epidermidis </i>phages Andhra and JBug18 (GenBank accession numbers KY442063 and MH972263, respectively). Hybrids 1-8 were generated by co-culturing both phages through the same host. Sequencing reads for hybrids 1-8 cover open reading frames across their whole genomes. Hybrids 9-18 were generated by passaging JBug18 through a host bearing a plasmid with Andhra-derived sequences (including <i>gp03</i> and <i>gp04</i>). Sequencing reads for hybrids 9-18 cover <i>gp03</i> and <i>gp04 </i>only.
DOI: 10.6084/m9.figshare.9596552
title: Data for Kloc et al PLOS One 2019

description: These are two graphpad prism files containing the raw data from electrophysiological experiments contributed in a paper to be published in Plos One (Kloc et al.). Each experiment is labeled in such a way that it can be identified.
DOI: 10.6084/m9.figshare.9596552.v1
title: Data for Kloc et al PLOS One 2019

description: These are two graphpad prism files containing the raw data from electrophysiological experiments contributed in a paper to be published in Plos One (Kloc et al.). Each experiment is labeled in such a way that it can be identified.
DOI: 10.6084/m9.figshare.9595010
title: C. horridus-B SVMP annotations

description: This tab-delimited text file contains the exon genomic coordinates for the SVMP genes on genomic BAC clones 27I13, 132M5, 145P9. Pseudo-genes or partial exon coordinates are also included.
DOI: 10.6084/m9.figshare.9595010.v1
title: C. horridus-B SVMP annotations

description: This tab-delimited text file contains the exon genomic coordinates for the SVMP genes on genomic BAC clones 27I13, 132M5, 145P9. Pseudo-genes or partial exon coordinates are also included.
DOI: 10.6084/m9.figshare.9594968
title: C. horridus-B PLA2 annotations

description: This tab-delimited text file contains the exon genomic coordinates for the PLA2 genes on BAC clone 190H17. Pseudo-genes or partial exon coordinates are also included.
DOI: 10.6084/m9.figshare.9596285.v1
title: Evolution of the carbohydrate 6-O sulfotransferase (C6OST) family in vertebrates and report of CHST16, a previously unrecognized C6OST gene lost from amniotes

description: <b>Master_table_C6OST.xlsx:</b> Complete table of all identified C6OST sequences. Includes sequence names, chromosomal locations, database identifiers and annotation notes of all C6OST sequences identified in this study. Also includes complete list of species, species abbreviations and genome assemblies used in the study.<br>Sequence names include species abbreviations followed by chromosome/linkage group designations (if available) and gene symbols. Asterisks indicate incomplete/partial sequences. Paralogs (within-species duplicates) with uncertain phylogenetic relationships are designated as (1of2), (2of2) et c.<br><br><b>Master_C6OST_all.rtf: </b>All identified C6OST sequences in FASTA format, in the same order as in Master_table_C6OST.xlsx. <b>Rich Test Format file </b>marking exon junctions in alternating colors.<br><br><b>Master_C6OST_all.fasta: </b>All identified C6OST sequences in FASTA format, in the same order as in Master_table_C6OST.xlsx. <b>FASTA format file </b>for alignment/sequence viewing applications.<br><br><b>Ident_C6OST_seq.txt:</b> List of identical C6OST sequences in this dataset.<br><br><b>190121_C6OST_full_align.fasta:</b> Alignment including the full repertoire of C6OST sequences (<i>CHST1, </i><i>CHST</i><i>2, </i><i>CHST</i><i>3, </i><i>CHST</i><i>4, </i><i>CHST</i><i>5, </i><i>CHST</i><i>6, </i><i>CHST</i><i>7, </i><i>CHST</i><i>16 </i>and related genes) in a smaller set of species. <br><br><b>190121_C6OST_full_IQ-TREE.tar.gz:</b> Phylogenetic analysis (IQ-TREE output files) for the full repertoire of C6OST sequences in a smaller set of species. This analysis corresponds to Figures 1-5 in the publication. The file 190305_CHST7_align.fasta.treefile includes the phylogenetic tree in Newick format.<br><br>The following files correspond to the alignments and phylogenetic analyses for each of the C6OST subfamilies with the full representation of species. These analyses correspond to Supplementary Figures S1-S8 in the publication. Within the IQ-TREE output files, the files ending on .treefile include the phylogenetic trees in Newick format.<br><b>190130_CHST1_align.fasta</b> <b>190130_CHST1_IQ-TREE.tar.gz</b><b>190130_CHST2_align.fasta</b><br><b>190130_CHST2</b><b>_IQ-TREE.tar.gz</b><b><br></b><b>190130_CHST3_align.fasta</b><br><b>190130_CHST3</b><b>_IQ-TREE.tar.gz</b><b>190130_CHST4-5-6_align.fasta</b><br><b>190130_CHST4-5-6</b><b>_IQ-TREE.tar.gz</b><b>190130_CHST16_align.fasta</b><br><b>190130_CHST16</b><b>_IQ-TREE.tar.gz</b><b>190305_CHST7_align.fasta</b><br><b>190305_CHST7</b><b>_IQ-TREE.tar.gz</b><b><br></b><b>Conserved_synteny_data.xlsx:</b> Chromosomal/conserved synteny data. Includes chromosomal locations and database identifiers of all C6OST-neighboring genes identified in the study. Also includes all identified synteny blocks in the human, chicken, Western clawed frog, spotted gar, zebrafish and medaka genomes.<br>
DOI: 10.6084/m9.figshare.9594902
title: C. horridus-A SVMP annotations

description: This tab-delimited text file contains the exon genomic coordinates for the SVMP genes on contigs 12944, 3724 and 124679. Pseudo-genes or partial exon coordinates are also included.
DOI: 10.6084/m9.figshare.9594968.v1
title: C. horridus-B PLA2 annotations

description: This tab-delimited text file contains the exon genomic coordinates for the PLA2 genes on BAC clone 190H17. Pseudo-genes or partial exon coordinates are also included.
DOI: 10.6084/m9.figshare.9594758
title: C.horridus-A PLA2 annotations

description: This tab-delimited text file contains the exon genomic coordinates for the PLA2 genes on contigs 9803 and 10004. Pseudo-genes or partial exon coordinates are also included.
DOI: 10.6084/m9.figshare.9594902.v1
title: C. horridus-A SVMP annotations

description: This tab-delimited text file contains the exon genomic coordinates for the SVMP genes on contigs 12944, 3724 and 124679. Pseudo-genes or partial exon coordinates are also included.
DOI: 10.6084/m9.figshare.9594569
title: Data that supports "Two-Ray Reflection Resolution Algorithm for Thin Planar Material Electromagnetic Property Measurement at the Millimeter-Wave Bands"

description: This data can be used to generate Fig. 7 in "Two-Ray Reflection Resolution Algorithm for Thin Planar Material Electromagnetic Property Measurement at the Millimeter-Wave Bands".
DOI: 10.6084/m9.figshare.9594758.v1
title: C.horridus-A PLA2 annotations

description: This tab-delimited text file contains the exon genomic coordinates for the PLA2 genes on contigs 9803 and 10004. Pseudo-genes or partial exon coordinates are also included.
DOI: 10.6084/m9.figshare.9594569.v1
title: Data that supports "Two-Ray Reflection Resolution Algorithm for Thin Planar Material Electromagnetic Property Measurement at the Millimeter-Wave Bands"

description: This data can be used to generate Fig. 7 in "Two-Ray Reflection Resolution Algorithm for Thin Planar Material Electromagnetic Property Measurement at the Millimeter-Wave Bands".