cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.q8qj3q
title: Occurrence Download

description: A dataset containing 2212 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Occurrence dataset of birds in 12 Universities in Nanjing, China"
 ]
}

 The dataset includes 2212 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025613-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.symvjv
title: Occurrence Download

description: A dataset containing 9611 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coscinodiscaceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9611 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025612-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccpxtds
title: CCDC 653306: Experimental Crystal Structure Determination

description: Related Article: S.Gomez Torres|2007|Thesis|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccpxthw
title: CCDC 653309: Experimental Crystal Structure Determination

description: Related Article: S.Gomez Torres|2007|Thesis|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.zadw35
title: Occurrence Download

description: A dataset containing 2082 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((8.30299 50.02252,8.36052 50.02252,8.36052 50.05805,8.30299 50.05805,8.30299 50.02252))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2082 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025614-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4hh7j4
title: Occurrence Download

description: A dataset containing 2227 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Occurrence dataset of waterbirds in Tiaozini Wetland, the World Nature Heritage, China"
 ]
}

 The dataset includes 2227 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025616-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a6zw99
title: Occurrence Download

description: A dataset containing 1329 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melosiraceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1329 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025617-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/adc4d0a1-52f3-4f73-850a-f5a5724bed1c
title: Data underlying the publication Objective Bayesian False Discovery Rate

description: Data and some resources for the paper Objective Bayesian False Discovery Rate<br>This includes the gene expression data of colorectal cancer (GSE14333) available from Gene Expression Omnibus (GEO). The GSE14333 dataset includes 54,613 genes from 290 individuals, and R codes to create the posterior FDR, which are separated into three files.
DOI: 10.4121/adc4d0a1-52f3-4f73-850a-f5a5724bed1c.v1
title: Data underlying the publication Objective Bayesian False Discovery Rate

description: Data and some resources for the paper Objective Bayesian False Discovery Rate<br>This includes the gene expression data of colorectal cancer (GSE14333) available from Gene Expression Omnibus (GEO). The GSE14333 dataset includes 54,613 genes from 290 individuals, and R codes to create the posterior FDR, which are separated into three files.
DOI: 10.18419/darus-1144
title: EHTM Code and Manual

description: This Dataset contains the implementation of the four element Extended Hill-type Muscle (EHTM) model with serial damping and eccentric force–velocity relation including Ca2+ dependent activation dynamics and internal methods for physiological muscle control for the finite-element solver LS-DYNA.
DOI: 10.21227/zm1y-b270
title: IMDb Movie Reviews to Movie Genres Dataset

description: This dataset contains nearly 1 Million unique movie reviews from 1150 different IMDb movies spread across 17 IMDb genres - Action, Adventure, Animation, Biography, Comedy, Crime, Drama, Fantasy, History, Horror, Music, Mystery, Romance, Sci-Fi, Sport, Thriller and War. The dataset also contains movie metadata such as date of release of the movie, run length, IMDb rating, movie rating (PG-13, R, etc), number of IMDb raters, and number of reviews per movie.
DOI: 10.23729/62121f8e-6d57-46b8-b74c-be32d7672957
title: JYFL-ACCLAB-JR154 Prompt and delayed spectroscopy of neutron deficient trans-lead nuclei 211, 213-Ac
title: JYFL-ACCLAB-JR154 Prompt and delayed spectroscopy of neutron deficient trans-lead nuclei 211, 213-Ac

description: We propose to perform prompt and delayed spectroscopy of neutron deficient 211, 213-Ac
(N = 122, 124) nuclei. The aim of this study is to detect and identify the low-lying excited states
and possible isomeric states. The low-lying isomeric states 1 / 2+ and 13 / 2+ observed in bismuth,
astatine and francium nuclei are likely to be present also in actinium nuclei.
The information obtained will extend our knowledge of the evolution of the single-particle states,
deformation and shape coexistence in neutron-deficient nuclei beyond lead. We propose to use the
RITU gas-filled recoil separator combined with JUROGAM III gamma ray spectrometer to study the
structure of 211, 213-Ac nuclei.
description: We propose to perform prompt and delayed spectroscopy of neutron deficient 211, 213-Ac
(N = 122, 124) nuclei. The aim of this study is to detect and identify the low-lying excited states
and possible isomeric states. The low-lying isomeric states 1 / 2+ and 13 / 2+ observed in bismuth,
astatine and francium nuclei are likely to be present also in actinium nuclei.
The information obtained will extend our knowledge of the evolution of the single-particle states,
deformation and shape coexistence in neutron-deficient nuclei beyond lead. We propose to use the
RITU gas-filled recoil separator combined with JUROGAM III gamma ray spectrometer to study the
structure of 211, 213-Ac nuclei.
DOI: 10.5066/p9qlifwv
title: Data Release for Lake Shadow Seepage Calculations from Ashumet Pond, Cape Cod, MA, 2016 - 2018

description: Hydrologic data were collected in the nearshore lake-bottom sediments of five lakes on western Cape Cod, Massachusetts: Ashumet (Falmouth), Long (Centerville), Santuit (Mashpee), Shubael (Barnstable), and Snake (Sandwich) Ponds. Water budgets of flow-through glacial kettle lakes are commonly dominated by groundwater flow into and surface-water seepage out of the lake, and inputs and losses from precipitation and evaporation are typically smaller. This data release presents water flux data collected from sites at the five lakes where lake water is seeping downward across the groundwater/surface-water interface into the groundwater system. Detailed characterization of water flux across the lake-bottom interface is critical to assessing the lake's influence on the groundwater system. The water fluxes were calculated for four of the lakes by using measurements of bottom-sediment temperature in shallow (less than 20 centimeters) vertical profiles and were measured directly at all five lakes by using seepage meters. Data were collected over four periods. Seepage meter measurements were made during August and September 2015. Temperature profile data were collected from July 27 to October 13, 2016; September 19 to October 11, 2017; and February 13 to February 23, 2018. The data are divided into four data sets (child items): (01) Temperature measurements from the vertical profiles, (02) calculated seepage rates from the temperature profiles, (03) measured seepage rates from the seepage meters and associated site information, and (04) average calculated seepage rates for each vertical temperature profile site and associated site information.
DOI: 10.5281/zenodo.12629599
title: Long-lived magnetization in an atomic spin chain tuned to a diabolic point

description: This is the OpenData Folder for the paper under the same name.
DOI: 10.5441/002/edbt.2014.65
title: ALIAS: Author Disambiguation in Microsoft Academic Search Engine Dataset
DOI: 10.5523/bris.1cwnj42n63q5w2sc843iww7bbd
title: Measurements for golf ball bounce

description: Video recordings of two experimental campaigns considering golf ball bounce. Data published as part of the paper "Measurements and linearized models for golf ball bounce".
DOI: 10.7488/ds/7806
title: Sediment transport and flood risk: Impact of newly constructed embankments on river dynamics and flooding in Kathmandu, Nepal

description: This dataset contains field observed river bed and bank erosion/deposition, simulated erosion/deposition data, water and sediment outflow rates, analysis of results, and Jupyter notebook code used to generate figures for a manuscript (2024WR037742) submitted to the AGU journal, Water Resources Research (https://agupubs.onlinelibrary.wiley.com/journal/19447973) on April 17, 2024. The research is part of a PhD project. The manuscript's title is " Sediment transport and flood risk: Impact of newly constructed embankments on river morphology and flood dynamics in Kathmandu, Nepal". Authors: Thapa S., Sinclair H.D., Creed M.J., Borthwick A.G.L., Watson C.S., and Muthusamy M.
description: All the file descriptions are included in a readme.txt file included in the documentation.
DOI: 10.17632/c73y5j36g2.1
title: Supplementary data to the article: A Novel Connectivity Metric of Identified Multi-cluster Fracture Networks in Permeable Formations

description: In the folder ShareData:
connectivitylargestcluster.txt: Connectivity metric data for all 80 outcrop maps considering no fracture sealing and the central cluster is the largest cluster.
connectivitylargestcluster0.05.txt: Connectivity metric data for all 80 outcrop maps considering 5 percent fracture sealing and the central cluster is the largest cluster.
connectivitylargestcluster0.1 .txt: Connectivity metric data for all 80 outcrop maps considering 5 percent fracture sealing and the central cluster is the largest cluster.
connectivitysmallestcluster.txt: Connectivity metric data for all 80 outcrop maps considering no facture sealing and the central cluster is the smallest cluster.
connectivitysmallestcluster0.05.txt: Connectivity metric data for all 80 outcrop maps considering 5 percent facture sealing and the central cluster is the smallest cluster.
connectivitysmallestcluster0.1 .txt: Connectivity metric data for all 80 outcrop maps considering 10 percent facture sealing and the central cluster is the smallest cluster.
map_1-80_connectivitylargestcluster-new: Connectivity metric data for all 80 outcrop maps considering adding one infinitely large fracture at different orientations.
resultanalysis.mlx:A Matlab code to plot figures and tables in the manuscript and supporting information.
DOI: 10.21410/7e4/gktgwx
title: Dilapidation et prodigalité (1989-1995)

description: Cette enquête d’Anne Gotman prolonge sa recherche sur l’héritage. Elle s’intéresse principalement aux formes et aux motifs de la dilapidation de l’héritage familial et accessoirement à la dilapidation de ses propres ressources ("surendettement"). Elle agrège plusieurs terrains menés entre 1990 et 1993 sur des dilapidateurs d’héritage, des personnes surendettées ou des membres d’un groupe de Débiteurs anonymes, des "experts" (assistantes sociales, psychiatres, juristes et juges des tutelles) ainsi que des prodigues faisant l’objet d’une protection judiciaire. Elle mobilise principalement 75 entretiens réalisés en région parisienne et dans une ville moyenne de l’Ouest ainsi que quelques entretiens tirés d’enquêtes précédentes (sur l’héritage et l’accession à la propriété dans le parc social). La recherche s’appuie sur d’autres sources historiques, juridiques, romanesques et autobiographiques, dont seule une partie – des notes concernant des dossiers de tutelle et de curatelle – a pu être mise à disposition. L’ouvrage éponyme de 1995, centré sur les dilapidations d’héritage, mêle analyse sociologique de cas et approche historique des définitions sociales et juridiques de la prodigalité. L’interprétation proposée repose sur une dualité de logiques de réception de l’héritage, entre "culte" et "profit", qui manifestent toutes deux un trouble de la transmission-réception (l’héritage est ainsi intégralement dépensé, abandonné ou donné). Deux figures typiques, les dilapidateurs ou "mangeurs d’héritage", et les prodigues ou "renonçants", sont finement décrites, à travers une exploration de l’histoire familiale et patrimoniale des héritiers, de leurs conduites économiques, et des rapports et des liens entretenus avec les membres de la parentèle. Sur le plan historique, est retracée l’évolution des modes de saisie de la prodigalité, entre interdiction et tolérance, jusqu’aux dispositifs socio-juridiques actuels de protection.
DOI: 10.26180/22133105.v4
title: The DREAM database

description: Overview
The Dream EEG and Mentation (DREAM) database collects and stores metadata about DREAM datasets, and is accessible to the public. DREAM datasets provide polysomnography and associated subjective mentation reports. Some datasets may also contain personally identifiable information about participants, but such information are not stored by the DREAM database.
Datasets are contributed to DREAM from many different labs in many different studies and, where possible, made openly accessible in the hope of pushing the fields of sleep, dream, brain-computer interface, and consciousness research forward. If you have data that others in the community might find useful, please consider contributing it to DREAM.
Contents
The DREAM database consists of a following data tables:

 Datasets
 Data records
 People

The records in <em>Datasets</em> list all officially accepted DREAM datasets and their summary metadata. <em>Data records</em> lists metadata of each individual datum from these datasets. <em>People</em> provides information on the data contributors, referred to by <em>Key ID</em> in <em>Datasets</em>.
DOI: 10.4121/14865096.v2
title: Supplementary data to the article: Enhancing Fracture Network Characterization: A Data-Driven, Outcrop-Based Analysis

description: In this dataset, we provide 80 published outcrop maps digitized by our pixel-based fracture detection algorithm. We also provide the box intensities of those outcrop maps. In addition, we provide the Matlab code to visualize the fracture outcrops. Detailed information about the dataset can be found in the README.txt file.<br>
DOI: 10.5281/zenodo.10554438
title: Supporting Information for "Competitiveness of Planctomycetes inhabiting macroalgae phycosphere in coastal ocean: evidences from a representative isolate with strong ability to degrade fucoidan"

description: 16S rRNA.mtsx and MLST.mtsx are used for Supplementary Fig. 1.

HD01.faa, HD01.gbk and HD01.gff are the gene prediction of strain HD01 by prokka. 

sulfatase_HD01.blast shows sulfatases in strain HD01 genome using SulfAtlas.

Temperature_NaCl_pH.xlsx and carbon_nitrogen_source.xlsx show the original data.

dataset1.tsv, dataste2.annotations, dataset3.xlsx are the dataset for “Competitiveness of Planctomycetes inhabiting macroalgae phycosphere in coastal ocean: evidences from a representative isolate with strong ability to degrade fucoidan” by Gao et al.

Metadata-LO-Letters-data_Gao et al_1..docx shows the description of dataset1-3.
DOI: 10.5281/zenodo.6538910
title: Theia OSO Land Cover Map 2021

description: Land cover map of France based on Sentinel-2 satellite images with iota² chain (https://framagit.org/iota2-project/iota2/)
description: {"references": ["Inglada, J., Vincent, A., Arias, M., Tardy, B., Morin, D., & Rodes, I., Operational high resolution land cover map production at the country scale using satellite image time series, Remote Sensing, 9(1), 95 (2017). http://dx.doi.org/10.3390/rs9010095"]}
DOI: 10.6084/m9.figshare.27723840
title: Supplementary Material for: Disease burden of Parkinson’s disease in Asia and its 34 countries and territories from 1990 to 2021: findings from the Global Burden of Disease Study 2021

description: Introduction: The increasing global population and aging have made Parkinson's disease (PD) a significant public health concern. Comprehensive evaluations of PD burden trends in Asian subregions and countries are lacking. This study investigated PD burden in Asia from 1990 to 2021, categorized by age, sex, and region.

Methods: Data from the Global Burden of Diseases, Injuries, and Risk Factors Study (GBD) 2021 were analyzed to assess the incidence, prevalence, mortality, and disability-adjusted life years (DALYs) across five Asian subregions and 34 countries/territories, using join-point regression, decomposition analysis, frontier analysis, and Bayesian models to examine changes, influencing factors, and predict future trends.

Results: In 2021, the age-standardized PD incidence and prevalence in Asia were higher than the global average, particularly in East Asia (24.16 and 243.46/100,000, respectively). From 1990 to 2021, the incidence of PD in Asia rose by 198.01%, its prevalence rose by 284.35%, mortality rose by 111.27%, and DALY rose by 144.45%. Males consistently presented a greater PD burden than females did, with a growing sex gap over time. PD burden increased with age, especially among those aged 65 years and older. Population aging was the primary driver of new PD cases, and increasing etiological factors led to more patients. Inequalities in the PD burden have increased between high- and low-income areas, with low-income regions being more affected. By 2036, PD incidence is projected to increase in all subregions except the High-income Asia-Pacific region, with males experiencing a higher rate of increase.

Conclusion: The PD burden in Asia has significantly increased over the past three decades, particularly in middle-aged and elderly males, middle- and low-SDI countries, and individuals already suffering from PD. The increasing incidence and aging population necessitate the reallocation of medical resources, improved chronic disease management systems, stronger public health interventions, and sustainable development efforts. Research into etiological factors, pathogenesis, early diagnosis, preventive interventions, and regional management is critical.
DOI: 10.15468/dl.ww2pdc
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Inventario Español de Especies Terrestres (MAGRAMA)",
 "Geometry POLYGON((-3.64866 40.52296,-3.68258 40.50253,-3.6517 40.46629,-3.63952 40.51352,-3.64866 40.52296))"
 ]
}

 The dataset includes 114 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025618-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13907217
title: Arctic Gridded surface cloud fraction radiative kernels (GCF-CRKs)

description: These gridded surface cloud fraction radiative kernels (GCF-CRKs) are created by integrating refined downwelling surface shortwave radiation (DSSR) estimates and a high-precision cloud fraction (CF). The DSSR is corrected by a CF-dependent model, which leveraging the correlation between the top-of-atmosphere (TOA) shortwave radiative parameters and surface radiation, combined with high-precision fused CF datasets from multiple satellite sources. 

  There are five individual files. “SFC_SW_Kernel_Arc.nc” is for CRKs of all clouds, “SFC_SW_lowcloud_Kernel_Arc.nc” is for CRKs of low-level clouds, “SFC_SW_midlowcloud_Kernel_Arc.nc” is for CRKs of mid-low-level clouds, “SFC_SW_midhighcloud_Kernel_Arc.nc” is for CRKs of mid-high-level clouds, and “SFC_SW_highcloud_Kernel_Arc.nc” is for CRKs of high-level clouds. The four cloud layers are derived from four pressure layers (surface to 700 hPa, 700-500 hPa, 500-300 hPa, and 300-50 hPa, representing low, middle-low, middle-high, and high clouds, respectively) based on the CERES-SYN stratification standard.

 

The file format is netcdf4, and was created by Matlab. To read these files, any software supporting netcdf4 can be used. These files only involved sunlit months from Apr to Sep during 2000-2020, with the longitude from -180°~180° and the latitude from 60°N~90°N.
DOI: 10.5281/zenodo.6511594
title: GEOGLAM Best Available Crop Type Masks

description: Best Available Crop Specific masks (BACS) over the major production and export countries for wheat, maize, rice, and soybeans, in the context of the G20 Global Agriculture Monitoring Program, GEOGLAM. The countries covered by GEOGLAM-BACS account for a total of 84% of soy, 54% of maize, 62% of wheat, and 92% of rice production globally.
description: The primary use of this dataset is for underpinning EO-based, global, crop-specific condition monitoring for four of the major crop commodities in the major production/exporting countries, through the GEOGLAM Crop Monitor activity. As noted in the prior section (Technical Validation: Known Issues & Required Improvements), there is room for improvement with respect to validation, extent, resolution, and seasonal specificity, and these limitations should be noted in the application of these data in different monitoring activities. Nevertheless, the data are already being operationally used within the GEOGLAM Crop Monitor Reports.
DOI: 10.5281/zenodo.8173107
title: PheKnowLator Human Disease Knowledge Graph Benchmarks Embeddings -- v1.0.0

description: PKT Human Disease Knowledge Graph Benchmark Builds - Embeddings (v1.0.0)
Build Date: September 03, 2019

Please note that all resources linked below redirect to a publicly Google Cloud Storage bucket where all data are publicly accessible. Routing users from this wiki page is perfectly safe and allows us to avoid requiring users to have a Google account and login to download data. If you have any questions or concerns, please email the project maintainer at callahantiff@gmail.com.
The KG Benchmark Builds can also be downloaded from Zenodo:👉 KGs: https://doi.org/10.5281/zenodo.7030200👉 Embeddings: https://zenodo.org/record/7030189
 
A modified version of the DeepWalk algorithm was implemented to generate molecular mechanism embeddings from the biomedical knowledge graph. A t-SNE plot of the dimensionality reduced mechanism embeddings is shown in Figure. For this release, the hyperparameters were set to 512 dimensions, 100 walks, walk length of 20, and a window of 10. Two types of KGs were embedded: (1) the full KG; and (2) the full KG with deductive closure using the OWL 2 EL reasoner, ELK via Protégé v5.1.1. ELK is able to classify instances and supports inferences over class hierarchies and object properties. inference over disjointness, intersection, and existential quantification (ontology class hierarchies).