cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30019699
title: <i>Nicotiana</i> section <i>Repandae</i> flavonoid biosynthetic pathway gene alignments

description: Consensus sequences of flavonoid biosynthetic pathway (FBP) genes from <i>Nicotiana</i> section <i>Repandae</i> allotetraploids (<i>N. nudicaulis</i>, <i>N. repanda</i>, and <i>N. stocktonii</i>) and their diploid progenitors, <i>N. sylvestris</i> and <i>N. obtusifolia</i> obtained by mapping RNA-seq reads to a concatenated FBP reference including FBP gene sequences from the <i>N. sylvestris</i> and <i>N. obtusifolia</i> genomes. Briefly, we used bwa-mem2 v.2.2.1 to map reads (pooling reads from corolla tissue from buds at 60%, 85%, and 95% of anthesis length) from each individual biological replicate to the FBP reference, sorted and indexed the resulting BAM files with samtools v.1.15.1, split each FBP sequence into separate fasta files with bamtools v.2.5.1, and used darkmatter (https://github.com/acorg/dark-matter), BCFtools v.1.15, and iVar v.1.3.1 to extract a consensus sequence for each FBP homeolog. These sequences were concatenated into a single fasta file for each FBP gene homeolog. The sequence names in each fasta file include an abbreviated species name and the biological replicate number. The abbreviated species names are as follows: Sylv = <i>N. sylvestris</i>, Obtus = <i>N. obtusifolia</i>, Nudi = <i>N. nudicaulis</i>, Repa = <i>N. repanda</i>, Stock = <i>N. stocktonii</i>. Seed stocks for the corolla material were obtained from the USDA <i>Nicotiana</i> Germplasm Bank: <i>N. sylvestris</i> (TW136), <i>N. obtusifolia</i> (TW143), <i>N. nudicaulis</i> (TW90), <i>N. repanda</i> (TW110), and <i>N. stocktonii </i>(TW86).
DOI: 10.6084/m9.figshare.30019699.v1
title: <i>Nicotiana</i> section <i>Repandae</i> flavonoid biosynthetic pathway gene alignments

description: Consensus sequences of flavonoid biosynthetic pathway (FBP) genes from <i>Nicotiana</i> section <i>Repandae</i> allotetraploids (<i>N. nudicaulis</i>, <i>N. repanda</i>, and <i>N. stocktonii</i>) and their diploid progenitors, <i>N. sylvestris</i> and <i>N. obtusifolia</i> obtained by mapping RNA-seq reads to a concatenated FBP reference including FBP gene sequences from the <i>N. sylvestris</i> and <i>N. obtusifolia</i> genomes. Briefly, we used bwa-mem2 v.2.2.1 to map reads (pooling reads from corolla tissue from buds at 60%, 85%, and 95% of anthesis length) from each individual biological replicate to the FBP reference, sorted and indexed the resulting BAM files with samtools v.1.15.1, split each FBP sequence into separate fasta files with bamtools v.2.5.1, and used darkmatter (https://github.com/acorg/dark-matter), BCFtools v.1.15, and iVar v.1.3.1 to extract a consensus sequence for each FBP homeolog. These sequences were concatenated into a single fasta file for each FBP gene homeolog. The sequence names in each fasta file include an abbreviated species name and the biological replicate number. The abbreviated species names are as follows: Sylv = <i>N. sylvestris</i>, Obtus = <i>N. obtusifolia</i>, Nudi = <i>N. nudicaulis</i>, Repa = <i>N. repanda</i>, Stock = <i>N. stocktonii</i>. Seed stocks for the corolla material were obtained from the USDA <i>Nicotiana</i> Germplasm Bank: <i>N. sylvestris</i> (TW136), <i>N. obtusifolia</i> (TW143), <i>N. nudicaulis</i> (TW90), <i>N. repanda</i> (TW110), and <i>N. stocktonii </i>(TW86).
DOI: 10.15468/dl.kktaar
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clinopodium javanicum"
 ]
}

 The dataset includes 80 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014523-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2hewbv
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Schistura menanensis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014524-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12737930
title: Example SMS and SB Real-time Cardiac MRI Datasets at 0.55T

description: This repository contains the raw data for Simultaneous Multi-Slice (SMS) and Single-Band (SB) real-time cardiac MRI acquired at 0.55T scanner. The data is stored as a MATLAB struct: k-space contains the raw data [Nsample x Narms x Ncoil], and kspace_info contains relevant acquisition-related information.

Code to process and reconstruct the data is available here: https://github.com/usc-mrel/SMS-RT

Please see the linked paper for more information about how the data is acquired.
DOI: 10.5281/zenodo.12737931
title: Example SMS and SB Real-time Cardiac MRI Datasets at 0.55T

description: This repository contains the raw data for Simultaneous Multi-Slice (SMS) and Single-Band (SB) real-time cardiac MRI acquired at 0.55T scanner. The data is stored as a MATLAB struct: k-space contains the raw data [Nsample x Narms x Ncoil], and kspace_info contains relevant acquisition-related information.

Code to process and reconstruct the data is available here: https://github.com/usc-mrel/SMS-RT

Please see the linked paper for more information about how the data is acquired.
DOI: 10.34740/kaggle/dsv/12925725
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.g9pt9p
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gentianella crassicaulis"
 ]
}

 The dataset includes 44 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014525-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bnhy9q
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "TaxonKey is Mucuna mutisiana"
 ]
}

 The dataset includes 88 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014526-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y2nxxg
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Benthophilus ctenolepidus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014528-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5sk8de
title: Occurrence Download

description: A dataset containing 8428 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lasius alienus"
 ]
}

 The dataset includes 8428 records from 211 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014527-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pefnwg
title: Occurrence Download

description: A dataset containing 472922 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alburnus alburnus"
 ]
}

 The dataset includes 472922 records from 414 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014466-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzvu7g
title: Occurrence Download

description: A dataset containing 1106661 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Belgium, Germany, Netherlands)",
 "TaxonKey is one of (Ondatra zibethicus, Myocastor coypus)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1106661 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014514-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc275xfs
title: CCDC 2061265: Experimental Crystal Structure Determination

description: Related Article: Qinghe Gao, Zhenhua Sun, Qinfei Xia, Ruonan Li, Wenlong Wang, Siwei Ma, Yixin Chai, Manman Wu, Wei Hu, Péter Ábrányi-Balogh, György M. Keserű, Xinya Han|2021|Org.Lett.|23|2664|doi:10.1021/acs.orglett.1c00571
DOI: 10.5517/ccdc.csd.cc24hvwd
title: CCDC 1981454: Experimental Crystal Structure Determination

description: Related Article: Xiao Liang, Lei Li, Kun Wei, Yu-Rong Yang|2021|Org.Lett.|23|2731|doi:10.1021/acs.orglett.1c00638
DOI: 10.6084/m9.figshare.13578697
title: Additional file 2 of A qualitative study of barriers to employment experienced by people living with HIV in Toronto and Ottawa

description: Additional file 2: Appendix 2A: Interview guide for interviews with PHAs unemployed but interested in re-entering work. Appendix 2B: Revised Interview guide for interviews with PHAs unemployed but interested in re-entering work. Appendix 2C: Interview guide for interviews with PHAs who have been placed in employment by EA.
DOI: 10.6084/m9.figshare.13578697.v2
title: Additional file 2 of A qualitative study of barriers to employment experienced by people living with HIV in Toronto and Ottawa

description: Additional file 2: Appendix 2A: Interview guide for interviews with PHAs unemployed but interested in re-entering work. Appendix 2B: Revised Interview guide for interviews with PHAs unemployed but interested in re-entering work. Appendix 2C: Interview guide for interviews with PHAs who have been placed in employment by EA.
DOI: 10.6084/m9.figshare.13578697.v1
title: Additional file 2 of A qualitative study of barriers to employment experienced by people living with HIV in Toronto and Ottawa

description: Additional file 2: Appendix 2A: Interview guide for interviews with PHAs unemployed but interested in re-entering work. Appendix 2B: Revised Interview guide for interviews with PHAs unemployed but interested in re-entering work. Appendix 2C: Interview guide for interviews with PHAs who have been placed in employment by EA.
DOI: 10.6084/m9.figshare.13578694
title: Additional file 1 of A qualitative study of barriers to employment experienced by people living with HIV in Toronto and Ottawa

description: Additional file 1. Recruitment Posters for PLWHs Employed and Unemployed.
DOI: 10.6084/m9.figshare.13578694.v2
title: Additional file 1 of A qualitative study of barriers to employment experienced by people living with HIV in Toronto and Ottawa

description: Additional file 1. Recruitment Posters for PLWHs Employed and Unemployed.
DOI: 10.6084/m9.figshare.13578694.v1
title: Additional file 1 of A qualitative study of barriers to employment experienced by people living with HIV in Toronto and Ottawa

description: Additional file 1. Recruitment Posters for PLWHs Employed and Unemployed.
DOI: 10.6084/m9.figshare.14368866
title: Additional file 3 of Label-free quantitative proteomics of Sorghum bicolor reveals the proteins strengthening plant defense against insect pest Chilo partellus

description: Additional file 3. Supplementary Data (excel files) provided with the manuscript. 1. Sample A vs B. 2. Sample C vs D. 3. Sample E vs F. Pairwise comparison of proteins from C. partellus induced and steady state from the three genotypes of S. bicolor, ICSV700 (A vs B), IS2205 (C vs D) and Swarna (E vs F). The excels sheets provide a list of up and down regulated proteins which are obtained based on the data analysis performed with PLGS, Waters.
DOI: 10.6084/m9.figshare.14368931
title: Additional file 3 of Fast and optimal algorithm for case-control matching using registry data: application on the antibiotics use of colorectal cancer patients

description: Additional file 3. The pre-processed data that are used in our study.
DOI: 10.6084/m9.figshare.14368931.v1
title: Additional file 3 of Fast and optimal algorithm for case-control matching using registry data: application on the antibiotics use of colorectal cancer patients

description: Additional file 3. The pre-processed data that are used in our study.
DOI: 10.6084/m9.figshare.14368934.v1
title: Additional file 4 of Fast and optimal algorithm for case-control matching using registry data: application on the antibiotics use of colorectal cancer patients

description: Additional file 4. The processed data that are used in our study. Those are the data that have been created after applying the pre-processing steps.
DOI: 10.6084/m9.figshare.14368934
title: Additional file 4 of Fast and optimal algorithm for case-control matching using registry data: application on the antibiotics use of colorectal cancer patients

description: Additional file 4. The processed data that are used in our study. Those are the data that have been created after applying the pre-processing steps.
DOI: 10.3886/e119446v77
title: COVID-19 US State Policy Database

description: For questions or comments about the database please contact:<br>Alexandra Skinner <br>skinnera@bu.edu <br>Research Fellow & Database Manager<br>Department of Health Law, Policy & Management <br>Boston University School of Public Health<br><br>Database of state policies on closures, shelter-in-place orders, housing protections, changes to Medicaid and SNAP, physical distancing closures, reopening, and more created by researchers at the Boston University School of Public Health. Policies included are state-wide directives or mandates, not guidance or recommendations. In order for a policy to be included, it must apply to the entire state. We are working quickly to go through state government websites to make the policy database as complete and accurate as possible in a rapidly changing policy context. If you use data on a given policy, we encourage you to triangulate based on additional sources of policy data and to review the source documentation to consider the coding decisions that are right for your work. Of course, please email us if you note a discrepancy so we can improve the database for everyone. State policy source documentation can be found at: tinyurl.com/statepolicysources.
description: State policies. Smallest Geographic Unit: State
description: other; Contributors: Megan Cole Brahim, Noa Krawczyk, Carolyn Hoffman, Claire Corkish, Elizabeth Ferrara, Elizabeth Long, Emily Baroni, Faith Contador, Hannah Simon, Morgan Simko, Rachel Scheckman, Sarah Brewer, Sue Kulkarni, Felicia Heykoop, Manish Patel, Aishwarya Vidyasagaran, Andrew Chiao, Cara Safon, Samantha Burkhart, Harry Jung, Victor Lee, Marina MacKinnon, Aarohi Rede, Marie Vearling, Sophie Li, Christina Wang, Tim Levengood, María Jordán P. Emma Chistolini
DOI: 10.6084/m9.figshare.14337260.v1
title: An Evaluation of Nomex Soft-Sided Storage Crates on their Ability to Locally Control Relative Humidity and Temperature

description: This is temperature and relative humidity data collected on Elsec 764 sensors (Littlemore Scientific Engineering) with data-logging capabilities. The sensors were offset calibrated in 2016 and were within the expected standard of error. There were 18 sensors deployed in a collection storage facility for the Smithsonian in Maryland from June 2018-August 2019. The sensors collected data hourly (the temperature data are limited to 0.5 C increments and the RH is 0.1% increments). The sensors were deployed to 3 metal storage enclosures and 3 fabric storage enclosures. For each enclosure there was a sensor placed as close to the center of the interior space as possible (center), one sensor placed in the interior but close to the wall (inside), and one sensor placed directly on the outside of the enclosure (ambient). This data was gathered to evaluate the effects of fabric and metal enclosures on relative humidity and temperature as a microclimate.
DOI: 10.5281/zenodo.4660836
title: BicGOdata

description: data and results of BicGO
DOI: 10.18112/openneuro.ds003578.v1.0.1
title: A longitudinal neuroimaging dataset on language processing in children ages 5, 7, and 9 years old
DOI: 10.6084/m9.figshare.14337260
title: Dataset: An Evaluation of Nomex Soft-Sided Storage Crates on their Ability to Locally Control Relative Humidity and Temperature

description: This is temperature and relative humidity data collected on Elsec 764 sensors (Littlemore Scientific Engineering) with data-logging capabilities. The sensors were offset calibrated in 2016 and were within the expected standard of error. There were 18 sensors deployed in a collection storage facility for the Smithsonian in Maryland from June 2018-August 2019. The sensors collected data hourly (the temperature data are limited to 0.5 C increments and the RH is 0.1% increments). The sensors were deployed to 3 metal storage enclosures and 3 fabric storage enclosures. For each enclosure there was a sensor placed as close to the center of the interior space as possible (center), one sensor placed in the interior but close to the wall (inside), and one sensor placed directly on the outside of the enclosure (ambient). This data was gathered to evaluate the effects of fabric and metal enclosures on relative humidity and temperature as a microclimate.
DOI: 10.6084/m9.figshare.14337260.v3
title: Dataset: An Evaluation of Nomex Soft-Sided Storage Crates on their Ability to Locally Control Relative Humidity and Temperature

description: This is temperature and relative humidity data collected on Elsec 764 sensors (Littlemore Scientific Engineering) with data-logging capabilities. The sensors were offset calibrated in 2016 and were within the expected standard of error. There were 18 sensors deployed in a collection storage facility for the Smithsonian in Maryland from June 2018-August 2019. The sensors collected data hourly (the temperature data are limited to 0.5 C increments and the RH is 0.1% increments). The sensors were deployed to 3 metal storage enclosures and 3 fabric storage enclosures. For each enclosure there was a sensor placed as close to the center of the interior space as possible (center), one sensor placed in the interior but close to the wall (inside), and one sensor placed directly on the outside of the enclosure (ambient). This data was gathered to evaluate the effects of fabric and metal enclosures on relative humidity and temperature as a microclimate.
DOI: 10.6084/m9.figshare.14337260.v2
title: Dataset: An Evaluation of Nomex Soft-Sided Storage Crates on their Ability to Locally Control Relative Humidity and Temperature

description: This is temperature and relative humidity data collected on Elsec 764 sensors (Littlemore Scientific Engineering) with data-logging capabilities. The sensors were offset calibrated in 2016 and were within the expected standard of error. There were 18 sensors deployed in a collection storage facility for the Smithsonian in Maryland from June 2018-August 2019. The sensors collected data hourly (the temperature data are limited to 0.5 C increments and the RH is 0.1% increments). The sensors were deployed to 3 metal storage enclosures and 3 fabric storage enclosures. For each enclosure there was a sensor placed as close to the center of the interior space as possible (center), one sensor placed in the interior but close to the wall (inside), and one sensor placed directly on the outside of the enclosure (ambient). This data was gathered to evaluate the effects of fabric and metal enclosures on relative humidity and temperature as a microclimate.
DOI: 10.5281/zenodo.4660158
title: Dataset of paper "Towards Understanding iOS App Store SearchAdvertising: An Explorative Study"

description: This is the dataset of paper "Towards Understanding iOS App Store SearchAdvertising: An Explorative Study". The dataset is collected from app big data analysis platform "www.chandashi.com". The txt files are named after the iosid of the applications, and each of them records all the ASA keywords covered by the application between January 1st and 7th, 2021. The json file records the detailed information of each app in the dataset, including iosid, app name, rank, category and the number of its ASA keywords.
DOI: 10.5281/zenodo.4660157
title: Dataset of paper "Towards Understanding iOS App Store SearchAdvertising: An Explorative Study"

description: This is the dataset of paper "Towards Understanding iOS App Store SearchAdvertising: An Explorative Study". The dataset is collected from app big data analysis platform "www.chandashi.com". The txt files are named after the iosid of the applications, and each of them records all the ASA keywords covered by the application between January 1st and 7th, 2021. The json file records the detailed information of each app in the dataset, including iosid, app name, rank, category and the number of its ASA keywords.
DOI: 10.5281/zenodo.4659324
title: test for restricted access

description: This is a test
DOI: 10.5281/zenodo.4659323
title: test for restricted access

description: This is a test
DOI: 10.6084/m9.figshare.14368958
title: Data repository: Effects of Historical Co-infection on Host Shift Abilities of Exploitative and Competitive Viruses (revised)

description: Raw data and R analysis scripts for revised version of paper "Effects of Historical Co-infection on Host Shift Abilities of Exploitative and Competitive Viruses." <br><br>Includes OD<sub>600</sub> readings taken on each host, data processing pipeline, and statistical analyses.<br>
DOI: 10.6084/m9.figshare.14368973
title: newmark.m

description: This is a MATLAB subroutine to draw response spectrum by Newmark average acceleration method
DOI: 10.6084/m9.figshare.14368973.v1
title: newmark.m

description: This is a MATLAB subroutine to draw response spectrum by Newmark average acceleration method
DOI: 10.21227/gm5e-4v87
title: Day-Ahead Forecasting using LSTM with rolling windows

description: The project involves day-ahead forecasting which takes a model fit into historical data and predicts future demand of electricity. Time series forecasting methods are used as the dataset contains an explicit order dependence between observations, i.e. a time dimension which makes the problem difficult to handle but makes the prediction more accurate. Various machine learning and deep learning algorithms were used to accomplish this work. Results obtained by autoregressive integrated moving average(ARIMA), autoregressive moving average with explanatory variable(ARIMAX), seasonal autoregressive moving average(SARIMA), seasonal autoregressive moving average(SARIMAX) and long short term memory(LSTM) recurrent neural networks with rolling windows were compared and the one with least error, i.e. LSTM with rolling windows was used for time series prediction.
DOI: 10.34740/kaggle/dsv/2082447
title: Contrastive Language Image Pretraining by openai