cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12295463.v1
title: Chinese Mystery Snail Project Master Database

description: This is the master database created for the Chinese Mystery Snail Project. This database was generated from multiple datasets of freshwater ecosystem parameters. The data is colour-code which can be matched to the data source found in the "Metadata" tab. The data tabs are separated by provincial jurisdictions. This database does not reflect the entire range of ecological parameters available through the various data sources because I only included parameters which are biologically important for the species being modelled for (the Chinese mystery snail, <i>Cipangopaludina chinensis</i>). <br>Disclaimer: This dataset was complied with a specific goal in mind and may not be suitable to use for other projects. Please contact the researchers involved if you have any questions about the database's usability,
DOI: 10.6084/m9.figshare.28911248.v1
title: Ig glycosylation raw data

description: Mass spectrometry raw data
DOI: 10.6084/m9.figshare.3556929.v1
title: Appendix A. Figures showing (1) locations of traps, (2) temporal variation in seed rain, (3) proportion of traps for gaps and understory and number of species, seeds, and seed mass for every functional group, (4) effects of gaps on species diversity, and (5) gap:understory ratios for absolute and relative seed arrival (species number, seed number, and seed mass) for explosively dispersed species; and tables presenting gap:understory ratios for absolute and relative seed arrival for all...

description: Figures showing (1) locations of traps, (2) temporal variation in seed rain, (3) proportion of traps for gaps and understory and number of species, seeds, and seed mass for every functional group, (4) effects of gaps on species diversity, and (5) gap:understory ratios for absolute and relative seed arrival (species number, seed number, and seed mass) for explosively dispersed species; and tables presenting gap:understory ratios for absolute and relative seed arrival for all functional groups.
DOI: 10.17632/6rbjff24ks
title: Rapid Scoring Systems for Predicting Adverse Outcomes in Patients with COVID-19: A Systematic Review and Meta-Analysis

description: OBJECTIVES. To assess the prognostic value of rapid scoring systems in predicting mortality and adverse outcomes in patients with COVID-19 (COronaVIrus Disease 2019).
MATERIALS AND METHODS. A literature search was conducted in PubMed, eLibrary, and Science Gate. The prognostic value was evaluated via meta-analysis of AUROC (Area Under the Receiver Operating Characteristic Curve) for mortality and adverse outcomes (ICU admission, organ support, or death). Statistical analysis was performed using MedCalc 20.027 and Microsoft Excel 2019.
RESULTS. Sixty studies with 619,494 patients were included. Five scoring systems –NEWS, NEWS2, REMS, qSOFA, and SIRS were analyzed for predicting hospital mortality. REMS showed the highest prognostic value (AUC 0.808; 95% CI 0.776–0.839), while SIRS had the lowest (AUC 0.662; 95% CI 0.596–0.728). NEWS, NEWS2, and qSOFA demonstrated good predictive performance (AUC 0.722–0.782). High heterogeneity (I² &gt; 96%, P &lt; 0,1) was observed across studies. 
Same scoring systems were assessed for predicting severe disease, NEWS and NEWS2 were most effective (AUC 0.778; 95% CI 0.707–0.849 and 0.738–0.819, respectively). REMS had an AUC of 0.733 (95% CI 0.708–0.757) with minimal heterogeneity (I² = 0%, P &gt; 0,1), while qSOFA and SIRS showed lower accuracy. High heterogeneity remained for NEWS, NEWS2, and qSOFA.
CONCLUSIONS. The systematic review and meta-analysis showed that the REMS, NEWS, NEWS2, and qSOFA scores have sufficient prognostic value for predicting mortality and severe outcomes in COVID-19 patients. The REMS scale was most effective for predicting in-hospital mortality, while NEWS and NEWS2 were superior for assessing the risk of severe disease. These findings support the use of rapid scoring systems for risk stratification in clinical practice.
DOI: 10.17632/76grr94pnp
title: Free trade agreements and LSBCI Database: A panel data

description: This dataset provides a comprehensive collection of maritime connectivity, trade agreements, and bilateral trade flows across 120 countries from 2012 to 2020. It includes key variables such as the Liner Shipping Bilateral Connectivity Index (LSBCI), maritime distances, economic indicators, and trade agreement status, facilitating the analysis of infrastructure thresholds in trade integration. The data is sourced from UNCTAD, CEPII, and World Bank, ensuring high reliability and global coverage. This repository supports empirical research on the interaction between maritime connectivity and trade policies, with applications in development economics, international trade, and transportation economics.
DOI: 10.17632/f7cf5fjvdh
title: Infant social-emotional development: The role of screen media?

description: This study sought to characterise screen media usage among children below two years of age in the UK, and to examine its associations with infant social-emotional functioning. Two mediational hypotheses were tested to understand the possible roles of reduced parent-infant play, and parent psychological factors that may motivate high screen usage. Based on the questionnaire responses of 327 parents of infants aged 6 - 24 months, screen media usage varied widely, including time spent on screen media (‘screen time’) and parental involvement (co-sharing and co-referencing).
DOI: 10.6084/m9.figshare.7045832.v1
title: Fermi Gas atoms trapped by one quasi-periodic lattice and a two-dimensional harmonic potential

description: Abstract In this work, we consider a dynamical three-dimensional model of a Bardeen-Cooper-Schrieffer superfluid Fermi gas trapped in a unidimensional quasiperiodic optical lattice and in the presence of a tight cigar-shaped trapping potential. By variational approximation, we study the possibility that the nonlinearity coefficient acting in a combination with the potential of the quasiperiodic optical lattice and cigar-shaped trapping potential, allows three dimensional bright gap solitons to arise. Families of three-dimensional fundamental gap soliton are stable for small values of amplitude of the quasiperiodic optical lattice. The manuscript presented may become a teaching and learning guide in studies involving fermionic gases trapped by light fields. Students are encouraged to perform variational calculations for the hydrodynamic equation in one dimension.
DOI: 10.17632/mfgt4vcsy5
title: Gen-2 Xenon Hyperpolarizer

description: This file contains additional information in the form of CAD and other drawings, part numbers, etc. for making of generation-2 XEUS hyperpolarizer -- to be published in Journal of Magnetic Resonance in 2020. Version 2 supersedes the original version: polarizer software was added.
DOI: 10.6084/m9.figshare.10316318.v1
title: First-in-human liver tumour surgery guided by multispectral fluorescence imaging in the visible and near-infrared-I/II windows

description: A novel multispectral imaging instrument was developed, which integrated visible and NIR-Ι/II wavelengths. The advantages of NIR-II fluorescence were investigated in liver tumour surgical guidance. This item contains experimental data supporting the research findings.
DOI: 10.6084/m9.figshare.14885907.v1
title: IDENT_MTL_2021

description: The data set is associated to the publication "No complementarity no gain - Net diversity effects on tree productivity occur once complementarity emerges during early stand development" by Urgoiti, Messier, Keeton, Reich, Gravel and Paquette. It provides data regarding the basal area at species level per plot and year from IDENT experiment of Montreal from 2009 to 2019. Information about block, plot and species richness is also given.
DOI: 10.6084/m9.figshare.18585419.v1
title: Simulation Results

description: Simulation results of Zhang et al. (2022)
DOI: 10.6084/m9.figshare.22361002.v3
title: Measuring body temperature in birds – the effects of sensor type and placement on estimated temperature and metabolic rate

description: This paper investigates how different body temperature measurement methods affect estimates of body temperature and metabolic rate in an endothermic model species, the great tit (Parus major), across an ambient temperature range of 40°C. <br> For more info, see README-file.
DOI: 10.6084/m9.figshare.28926992.v1
title: R code for statistical analysis in PDO Thread Lift Study

description: Thread lift study<br>
DOI: 10.6084/m9.figshare.7011743.v1
title: A Transcription of Robert Boyle's Weather Diary 1684-6

description: This fileset contains a digital transcription of the weather observations contained in MS 190 fols. 146-66 (ref no. RB/2/21/11) kept at the archives of the Royal Society of London. A correction of the instrumental observations to modern standards is also provided. These observations appear to have been taken at Robert Boyle's laboratory at Pall Mall in London, and were written by Boyle's assistant Hugh Greg. These data are described in a paper in the journal 'Weather' ( https://doi.org/10.1002/wea.3531)<br>
DOI: 10.6084/m9.figshare.7605242.v2
title: Food web motif data

description: Supplementary Information for Giling et al. "Plant diversity alters the representation of motifs in food webs".<br><br>The data files provided contain the results used to generate the figures and statistical analysis in the paper, including the frequencies and representation (normalised z-scores) of each motif in each food web. These files can be used in conjunction with the provided code (R scripts 2 and 3; DOI 10.6084/m9.figshare.7605173) to reproduce the results.<br>Three data files are provided:- "Giling_et_all_motif_data_full_network.csv": motif counts in the full food webs- "Giling_et_all_motif_data_sub_network.csv": motif counts in the sub-web of consumers only- "Giling_et_all_motif_data_complexity_scenario.csv": motif counts in the full food webs under the scenario where encounter probability decreases with plant diversity (see Supplementary Note 2).<br>The three files are formatted identically.
DOI: 10.6084/m9.figshare.14275718.v1
title: Brown syndrome: clinical features and results of superior oblique tenotomy

description: ABSTRACT Purpose: This study was conducted to further define the specific clinical characteristics of patients with Brown syndrome and evaluate the outcomes of superior oblique tenotomy in its surgical management. Methods: A retrospective analysis of the medical charts of 45 patients with Brown syndrome was performed, which revealed that 11 patients underwent superior oblique tenotomy due to abnormal head posture and/or hypotropia and 1 patient underwent bilateral superior oblique tendon elongation with a silicone band due to abnormal head posture. In the last patient, silicone bands were removed at the postoperative 3rd month due to the lack of improvement in the abnormal head posture and the limitation of elevation in adduction. Simultaneous horizontal rectus muscle surgery was performed in four patients. Results: There was a predominance of female gender, right eye, congenital form, unilaterality, A-pattern, and an abnormal head posture type with a combination of chin up and head tilting. Bilateral form was observed only in female patients. Amblyopia was detected in two patients. Among patients aged &gt;5 years, 40% had reduced stereopsis. Abnormal head posture was found in 60% of patients. More than half of them were diagnosed with a vertical and/or horizontal deviation. Tenotomy procedure eliminated the abnormal head posture in all patients and significantly improved the mean limitation of elevation in adduction and hypotropia (p=0.001, p=0.012). Two patients developed inferior oblique overaction in the operated eye. There was complete spontaneous resolution in two patients. Conclusions: The clinical features of patients with Brown syndrome in our study are considerably consistent with those of previous reports. The present study demonstrated the effectiveness of superior oblique tenotomy with less overcorrection in the surgical treatment of Brown syndrome.
DOI: 10.6084/m9.figshare.23226281.v1
title: ToI, Ver.-I : Trees of India, Version-I

description: The database deals with the trees of India. The ToI, Ver.-I (Trees of India, Version-I) includes data on 3708 tree species distributed across 35 states/union territories of India. The database is based on systematic review of 313 literature sources published from 1872-2022. The database follows the scientific nomenclature as per Plants of the World Online (2022). The database also includes 609 species endemic to India, and 347 species currently threatened as per IUCN (2022).
DOI: 10.6084/m9.figshare.28602026.v1
title: ReVital dataset.xlsx

description: The <i>ReVITAL</i> project is a joint initiative developed by the Research Center for Well-being and Social Inclusion (CIBIS) at the University of Almería and the Almerian Federation of Associations of People with Disabilities (FAAM). This project represents an evolution of previous research carried out by the CIBIS-UAL team, focused on the use of immersive virtual reality as an innovative tool to promote psychological and emotional well-being in people with mild to moderate dementia.The main objective of <i>ReVITAL</i> has been to explore the therapeutic effects of exposure to virtual environments specifically designed to induce feelings of calm, emotional connection, and relaxation. These environments include bucolic landscapes, relaxing natural scenes, and places of special personal significance for the participants. Through these immersive experiences, the project has assessed physiological, psychological, and behavioral variables related to well-being, such as reducing anxiety levels and improving perceived quality of life.The preliminary results of the project have shown a high level of acceptance from both users and professionals involved, highlighting the potential of virtual reality as an effective and non-invasive strategy to address some of the emotional and social needs of people with dementia. Furthermore, the project has generated valuable applied knowledge that can be useful for implementing new therapeutic methodologies in clinical and residential settings.
DOI: 10.17632/bkn4xx4kc3
title: Dataset for 'The neural correlates of logical-mathematical symbol systems processing resemble that of spatial cognition more than natural language processing'

description: Dataset for 'The neural correlates of logical-mathematical symbol systems processing resemble that of spatial cognition more than natural language processing'

The file zips for each figure contain the raw data, analysis code, and a 'readme' file for explanation.
 figure1_domain-level meta-maps and overlap
 figure2_sub-domain of LMS meta-maps and overlap 
 figure3_sub-domain of language meta-maps and overlap 
 figure4_subject-level fMRI maps and overlap 
 figure5_6_ROI multivariate pattern similarity

The research abstract:
The ability to manipulate logical-mathematical symbols (LMS), encompassing tasks such as calculation, reasoning, and programming, is a cognitive skill arguably unique to humans. Considering the relatively recent emergence of this ability in human evolutionary history, it has been suggested that LMS processing may build upon more fundamental cognitive systems, possibly through neuronal recycling. Previous studies have pinpointed two primary candidates, natural language processing and spatial cognition. Existing comparisons between these domains largely relied on task-level comparison, which may be confounded by task idiosyncrasy. The present study instead compared the neural correlates at the domain level with both automated meta-analysis and synthesized maps based on three representative LMS tasks, reasoning, calculation, and mental programming. Our results revealed a more substantial cortical overlap between LMS processing and spatial cognition, in contrast to language processing. Furthermore, in regions activated by both spatial and language processing, the multivariate activation pattern for LMS processing exhibited greater multivariate similarity to spatial cognition than to language processing. A hierarchical clustering analysis further indicated that typical LMS tasks were indistinguishable from spatial cognition tasks at the neural level, suggesting an inherent connection between these two cognitive processes. Taken together, our findings support the hypothesis that spatial cognition is likely the basis of LMS processing, which may shed light on the limitations of large language models in logical reasoning, particularly those trained exclusively on textual data without explicit emphasis on spatial content.
DOI: 10.17632/4247t5xfbk
title: THE IMPACT OF SURVEILLANCE ON THE PRACTICE OF INVESTIGATIVE JOURNALISM IN LUSAKA DISTRICT, ZAMBIA.

description: This study explored the impact of surveillance by the state on the practice of investigative journalists working in Lusaka Province. Employing the Panopticon framework, the study examined the use of surveillance systems by authorities to control journalists in order to make them more submissive to state control. 
This qualitative study involved a series of in-depth interviews with 12 investigative journalists who work for various private media institutions based in Lusaka province. Two sampling method were used to sample the respondents that is purposive when it came to identifying the centre which offers investigative journalism training in Zambia and snowball when identifying journalists who are actively involved in investigative journalism.
This study established that investigative journalists in Lusaka are fully aware of various forms of surveillance mechanism which are being used by the state such as phone tapping, trailing and the use of closed-circuit television (CCTV). The study further found out that the presence of these surveillance mechanism instils fear in investigative journalists such that they do not feel safe but they have adopted different means of opposing the surveillance so that they can continue doing their work. The respondents were of the view that the country needs to have laws which will protect them from surveillance if they are to continue offering tangible checks and balances to those in power.
DOI: 10.17632/kzhphynnzn
title: কালীপ্রসন্ন সিংহ : বিদ্রূপ ও ব্যঙ্গরসের সাহিত্যিক রূপায়ণ

description: সারসংক্ষেপ:
ঊনবিংশ শতকের বাংলা সাহিত্য জগতে কালীপ্রসন্ন সিংহ ছিলেন ব্যঙ্গ ও বিদ্রূপের এক উজ্জ্বল কারিগর। সমাজের প্রচলিত কুসংস্কার, ভণ্ডামি ও অবক্ষয়ের বিরুদ্ধে তাঁর সাহিত্য ছিল তীক্ষ্ণ শ্লেষ ও রসবোধে পরিপূর্ণ। ১৮৪০ সালে জন্মগ্রহণকারী কালীপ্রসন্ন শৈশবে পিতৃহারা হলেও শিক্ষার ক্ষেত্রে অসাধারণ দক্ষতা অর্জন করেন। তিনি ‘হুতোম প্যাঁচার নকশা’তে চলিত ভাষায় রচিত বিদ্রূপাত্মক গদ্যের মাধ্যমে সমকালীন বাবু সমাজের জীবনচিত্র তুলে ধরেন।
সাহিত্য ছাড়াও তিনি সাংবাদিকতা ও নাট্যচর্চায় গুরুত্বপূর্ণ অবদান রাখেন। ‘বিদ্যোৎসাহিনী সভা’ ও ‘বিদ্যোৎসাহিনী রঙ্গমঞ্চ’ প্রতিষ্ঠার মাধ্যমে বাংলা নাট্যধারার বিকাশে ভূমিকা রাখেন। তাঁর রচনায় যেমন সমালোচনার গভীরতা ছিল, তেমনি ছিল সমাজ সচেতনতা। মাইকেল মধুসূদন দত্তের ‘অমিত্রাক্ষর ছন্দ’-এর পক্ষে তিনি দাঁড়িয়ে সাহিত্যের নবযুগের সূচনা করেন। 
বাংলা ভাষার অন্যতম শ্রেষ্ঠ অনুবাদক হিসেবে তিনি ‘মহাভারত’ বাংলায় অনুবাদ করেন এবং নিঃস্বার্থভাবে তা বিতরণ করেন। তবে অর্থনৈতিক সংকট ও ব্যক্তিগত দুর্ভাগ্য তাঁকে অকালে মৃত্যুর দিকে ঠেলে দেয়। মাত্র ৩০ বছর বয়সে এই প্রতিভাবান সাহিত্যিকের জীবনাবসান ঘটে, তবে বাংলা সাহিত্যে তাঁর ব্যঙ্গরসাত্মক ও বিশ্লেষণধর্মী রচনা আজও অমর হয়ে রয়েছে।
সূচক শব্দ: বিদ্রূপ, ব্যঙ্গরস, সমাজ-বাস্তবতা, সাহিত্যিক শৈলী, মহাভারত অনুবাদ। 
ভূমিকা : 
কালীপ্রসন্ন সিংহ ঊনবিংশ শতকের বাংলা সাহিত্যে বিদ্রূপ ও ব্যঙ্গরসের অনন্য সংযোজন ঘটিয়েছিলেন। তাঁর সাহিত্যচর্চা কেবলমাত্র রঙ্গরসাত্মক নয়, বরং সমাজ-বাস্তবতার এক তীক্ষ্ণ প্রতিচিত্র। ‘হুতোম প্যাঁচার নকশা’ এবং মহাভারতের অনুবাদের মাধ্যমে তিনি বাংলা সাহিত্যে স্থায়ী আসন তৈরি করেন।
DOI: 10.17632/yx627x7hns
title: Functional diversification of plant small molecules by the gut microbiome

description: Plants are composed of diverse secondary metabolites (PSMs) which are widely associated with human health. Whether and how the gut microbiome mediates such impacts of PSMs are poorly understood. Here we show that discrete phenolic glycosides, abundant health-associated PSMs, are utilized by distinct members of the human gut microbiome. Within the Bacteroides, the predominant Gram-negative bacteria of the Western human gut, we reveal a specialized multi-enzyme system dedicated to the processing of distinct glycosides based on structural differences in phenolic moieties. This Bacteroides metabolic system liberates chemically-distinct aglycones with diverse biological functions such as colonization resistance against the gut pathogen Clostridioides difficile, via anti-microbial activation of polydatin to the stilbene resveratrol, and intestinal homeostasis, via activation of salicin to the immunoregulatory aglycone saligenin. Together our results demonstrate an axis of plant-microbiome interactions via generation of biological diversity of phenolic aglycone “effector” functions by a distinct gut microbiome-encoded PSM-processing system.
DOI: 10.6084/m9.figshare.24548587.v1
title: Mobility by CLIMAT

description: File contains mobility of electrons and holes found by Constant light-induced magnetotransport in various materials:p-Silicon3CAT-peroCdTeY6NaBiS2sc-CsPbBr3sc-MAPbBr3FASnI32PACzCuSCNPDINN4H-SiC<br>
DOI: 10.6084/m9.figshare.25249051.v1
title: Tomato Dataset YOLOV5

description: Mohsin, Abu (2024). Tomato Dataset YOLOV5. figshare. . https://doi.org/10.6084/m9.figshare.25249051Tomato dataset
DOI: 10.6084/m9.figshare.25864525.v2
title: <b>EEfinder, </b><b>a general purpose </b><b>tool for identification of bacterial and viral endogenized elements in eukaryotic genomes</b>

description: Horizontal transfer is a phenomenon of genetic material transmission between species with no parental relationship. It has been characterized among several major branches of life, including among prokaryotes, viruses and eukaryotes. Genetic elements derived from horizontal transfer are known as Endogenous Bacterial Elements and Endogenous Viral Elements. Endogenous elements characterization provides a snapshot of past host-pathogen interactions and coevolution as well as a reference sequence information to remove false positive results from viral metagenomic studies. However, there is a current lack of standardized tools for endogenous elements identification, which hinder comparative studies and reproducibility within this field. Here we describe EEfinder, a new tool for identification and classification of endogenous elements derived from horizontal transfer. The tool was developed to include six standard steps performed in this type of analysis: data cleaning, pairwise alignment, filtering candidate elements, taxonomy assignment, merging of truncated elements and flanks extraction. We evaluated the sensitivity of EEfinder to identify endogenous elements through comparative analysis using data from the literature and showed that EEfinder can systematically identify endogenous elements with bacterial/viral origin.
DOI: 10.6084/m9.figshare.28802405.v1
title: Simulation data the CESM2 model

description: Simulation data are available on the application of the CESM2 model to analyze the impact of the Tonga eruption on the stratospheric QBO.