cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.p8hzwu
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "Geometry POLYGON((-142.09341 -16.62742,-28.90659 -16.62742,-28.90659 28.62742,-142.09341 28.62742,-142.09341 -16.62742))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Caluromys derbianus (Waterhouse, 1841)",
 "Year 2000-2024"
 ]
}

 The dataset includes 54 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000846-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r9egsq
title: Occurrence Download

description: A dataset containing 1008 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aspidoscelis parvisocius (Zweifel, 1960)"
 ]
}

 The dataset includes 1008 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000849-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7tqbbx
title: Occurrence Download

description: A dataset containing 4320 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen, Occurrence evidence)",
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "TaxonKey is Glyptemys insculpta (Le Conte, 1830)",
 "Year 1980-2024"
 ]
}

 The dataset includes 4320 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000848-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d7n6f4
title: Occurrence Download

description: A dataset containing 6052655 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Megaceryle alcyon (Linnaeus, 1758)",
 "Year 1900-2024"
 ]
}

 The dataset includes 6052655 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000788-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p32aat
title: Occurrence Download

description: A dataset containing 24286 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Puma concolor (Linnaeus, 1771)"
 ]
}

 The dataset includes 24286 records from 383 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000850-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tbu7gp
title: Occurrence Download

description: A dataset containing 352 records in GBIF matching the query:
 SELECT "year", GBIF_EEARGCode( 1000, decimalLatitude, decimalLongitude, COALESCE(coordinateUncertaintyInMeters, 1000) ) AS eeaCellCode, classKey, class, speciesKey, species, COUNT(*) AS occurrences, MIN(COALESCE(coordinateUncertaintyInMeters, 1000)) AS minCoordinateUncertaintyInMeters, MIN(GBIF_TemporalUncertainty(eventDate)) AS minTemporalUncertainty, IF(ISNULL(classKey), NULL, SUM(COUNT(*)) OVER (PARTITION BY classKey)) AS classCount FROM occurrence WHERE occurrenceStatus = 'PRESENT' AND speciesKey IN ( 1314773 ) AND continent = 'EUROPE' AND "year" &gt;= 1900 AND hasCoordinate = TRUE AND speciesKey IS NOT NULL AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID') AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH') GROUP BY "year", eeaCellCode, classKey, class, speciesKey, species ORDER BY "year" DESC, eeaCellCode ASC, speciesKey ASC; 

 The dataset's 352 records were derived from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000767-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n59fqt
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Specklinia endotrachys (Rchb.f.) Pridgeon & M.W.Chase"
 ]
}

 The dataset includes 129 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000852-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6v525a
title: Occurrence Download

description: A dataset containing 67861 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "Country is one of (United States of America, United States Minor Outlying Islands, American Samoa, Micronesia (Federated States of), Guam, Marshall Islands, Northern Mariana Islands, Puerto Rico, Palau, Virgin Islands (U.S.))",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 },
 {
 "and" : [
 "Geometry POLYGON((-76.34069 43.75966,-84.33874 41.82607,-89.52428 41.91396,-90.49108 34.09169,-84.25085 33.74013,-81.61413 33.91591,-78.27428 36.55263,-76.34069 43.75966))",
 "HasCoordinate is one of (true)",
 "TaxonKey is one of (Salmoniformes)"
 ]
 }
 ]
}

 The dataset includes 67861 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000851-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14219165
title: Mangrove terrestrial laser scanning (TLS) point clouds and quantitative structural models (QSMs)

description: Datasets for a publication entitled, "Terrestrial laser scanning for the estimation of above ground biomass of mangrove roots by modelling them as inverted trees."

See the file "Data dictionary for Mangrove terrestrial laser scanning.pdf" for a description of the datasets included in the zipped folder.
DOI: 10.5281/zenodo.14219166
title: Mangrove terrestrial laser scanning (TLS) point clouds and quantitative structural models (QSMs)

description: Datasets for a publication entitled, "Terrestrial laser scanning for the estimation of above ground biomass of mangrove roots by modelling them as inverted trees."

See the file "Data dictionary for Mangrove terrestrial laser scanning.pdf" for a description of the datasets included in the zipped folder.
DOI: 10.25919/s3ra-5069
title: Parkes observations for project P1338 semester 2024OCTS_08

description: Fast radio bursts (FRBs) are millisecond-duration radio bursts of extragalactic origin. Since the discovery of the first FRB in the archival Parkes/Murriyang multibeam data, a broad dichotomy in population has emerged. Some FRBs have been seen to be repeating, while others are not, despite a significant amount of follow-up using different radio telescopes. The repeating FRB 20240114A was recently discovered by CHIME/FRB, which has been seen to have an exceptionally high burst activity. Such extreme burst activity has not been seen in any other source. The repeating FRBs, such as FRB 20240114A, provide an unparalleled window into their circumburst environment due to their repeating nature, which can be used to constrain possible progenitor models and test underlying emission mechanisms. The previous Parkes/Murriyang source follow-up has also revealed intriguing spectro-polarimetric properties, such as frequency-dependent evolution of burst central frequency or chromaticity, a possible activity window, significantly large circular polarisation (CP), and frequency-dependent CP. These properties hold the key towards understanding the circumburst environment of the FRBs, and test possible progenitor models. A large bandwidth instrument with reliable polarimetry has been critical in uncovering these properties. The ultra-wideband low (UWL) receiver on Parkes/Murriyang is ideally suited to explore the source's wideband spectro-temporal and polarimetric behaviour. We propose a campaign to regularly follow up FRB 20240114A to ascertain its long-term evolution of spectro-temporal properties.
DOI: 10.6084/m9.figshare.27905289
title: Impact of SARS-CoV-2 Variants, Age, Sex, and Angiotensin II on Inflammatory, Anti-inflammatory, Transcriptional Regulatory, and Drug Processing Pathways in Syrian Golden Hamsters

description: This dataset presents differential gene expression analysis at the mRNA level, highlighting the effects of six SARS-CoV-2 variants on 36 genes linked to inflammation, anti-inflammation, transcriptional regulation, drug metabolism, and membrane transport. The study utilized lung and nasal turbinate tissues from 21 male and 21 female Syrian golden hamsters to uncover these variant-specific effects. Additionally, it delves into the effects of angiotensin II and the D614G variant, individually and in combination, on lung gene expression in seven- and four-month-old male and female Syrian golden hamsters, comprising 23 of each sex, offering new insights into age- and sex-dependent gene regulation. The nCounter analysis system (NanoString Technologies, Seattle, WA) was used to quantify mRNA expression, and the associated data analysis software, nSolver® 4.0 software and the Advanced Analysis 2.0 package was used to perform genomic data analysis.
DOI: 10.17632/kt3zphzn59.1
title: WEPP v RUSLE USA data

description: Data values extracted from published figures
DOI: 10.5517/ccdc.csd.cc2dn2y3
title: CCDC 2223845: Experimental Crystal Structure Determination

description: Related Article: Yingtao Wu, Xin Guan, Kehan Jiao, Huaqiu Zhao, Mingrui Li, Jiaqiong Sun, Guangfan Zheng, Qian Zhang|2024|Green Chemistry|26|10940|doi:10.1039/D4GC03113J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f1xgw
title: CCDC 2236168: Experimental Crystal Structure Determination

description: Related Article: Yuki Hagiwara, Akifumi Takanabe, Toru Asahi, Hideko Koshima|2024|Chem.-Eur.J.|30|e202401590|doi:10.1002/chem.202401590
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.48758/ufz.12915
title: Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR MS) data of stable isotope labelled ozonation products (OP) in wastewater effluent organic matter (EfOM).

description: Processed and quality checked FT-ICR MS data for effluent organic matter ozonated with heavy oxygen (Oz_EfOM) and control sample (non_Oz_EfOM). Sample details, sample ozonation, measurement conditions and data evaluation workflows are described in the companion papers (Jennings et al. 2023:https://doi.org/10.1016/j.watres.2022.119477 and Olea et al. 2023: https://doi.org/https://doi.org/10.1016/j.watres.2023.119740).
DOI: 10.48758/ufz.14331
title: Liquid chromatography Fourier transform ion cyclotron resonance mass spectrometry (LC-FT-ICR MS) data of original arctic ocean seawater (AO) and peat pore water (PPW).

description: Processed and quality checked FT-ICR MS data for original seawater of two samples from the arctic ocean (AO_low, and AO_high) and PPL extracted (AO_high^SPE). In addition peat pore water (PPW_xx^S0) and salt amended peat pore water (PPW_xx^S35) is used, where xx indicates the concentration levels (mg DOC / L). Sampling and measurement conditions are described in the companion paper (Lechtenfeld et al. 2024: https://doi.org/10.1021/acs.est.3c07219). Direct infusion (DI, AO_high^SPE only) and LC-FT-ICR MS (all other sample) data are included. LC-FT-ICR MS data were segmented into individual bins of one minute and all scans averaged into a single mass spectrum. For original peat pore water (PPW_xx^S0) and SPE extracts (AO_high^SPE), 18 segments (7-24 min) are included while for original salt water (AO_low, AO_high, and PPW_xx^S35) only segments 8-18 (14-24 min) are included. The segment number (segment) as well as the retention time (in min) of the respective spectrum are indicated in the evalualtion summary (eval.summary) table.
The archive contains five csv files:
1) Seawater LC-MS method paper_formulas.AO-samples_2023-11-13.csv (complete molecular formulas table for all arctic ocean samples)
2) Seawater LC-MS method paper_eval.summary.AO-samples_2023-11-13.csv (aggreagted data for all arctic ocean samples)
3) Seawater LC-MS method paper_formulas.PPW-samples_2023-11-13.csv (complete molecular formulas table for all peat pore water samples)
4) Seawater LC-MS method paper_eval.summary.PPW-samples_2023-11-13.csv (aggreagted data for all peat pore water samples)
5) Repository_file_definition_2022_03_20.csv (description of all column in the formulas and eval.summary files)
DOI: 10.15468/dl.588p58
title: Occurrence Download

description: A dataset containing 2108 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "Country is Mexico",
 "Geometry POLYGON((-100.12508 20.98188,-100.43336 21.02931,-100.67049 20.7151,-100.43336 20.26454,-100.05987 19.95034,-99.80495 20.06891,-99.75159 20.46611,-99.39589 20.62618,-99.31289 21.01745,-99.04611 21.14195,-98.98683 21.29016,-99.17061 21.73479,-99.3366 21.68736,-99.44331 21.53322,-99.73973 21.63993,-99.85237 21.51544,-99.83459 21.24273,-100.00058 21.28423,-100.12508 20.98188))",
 "TaxonKey is Arachnida"
 ]
}

 The dataset includes 2108 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000853-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14196502
title: European Mean Target Achievement (MTA) Indicator

description: The EU MTA indicator is one way of assessing the benefits of protected area expansions using information of covered species distributions. It can be interpreted as the average number of species or habitats that are adequately (indicated through a target) conserved by conservation areas (Natura 2000 and/or CDDA sites) within the European union.

This repository contains the created MTA indicator values created from an intersection of the Natura2000 and CDDA databases with the sensitive Article 12 and 17 reporting data.

Filename explanation: 

MTA_{target}_{scale}_{directive}_{biodiversity}_{version}.csv




target
Which target was used for calculations. Currently: 'loglinear'


scale
Which datasets from the reporting was used. Supported currently are EU and MS


directive
Subset either for 'All' species and habitats, or just 'Art12' or 'Art17' data


biodiversity
Subset either for 'All',  'species' or 'habitats' respectively


version
A unique version number for each upload identical with the Zotero version.




 

For further information and a detailed factsheet can be found on the online dashboard here:https://martin-jung.github.io/EUMTA/dashboard.html 

---

* The MTA indicator calculation and the creation of this dashboard contributes to WP7 of the NaturaConnect project. The information here is provided free of charge and the project takes no responsibility for errors or misuse.
DOI: 10.5281/zenodo.14196503
title: European Mean Target Achievement (MTA) Indicator

description: The EU MTA indicator is one way of assessing the benefits of protected area expansions using information of covered species distributions. It can be interpreted as the average number of species or habitats that are adequately (indicated through a target) conserved by conservation areas (Natura 2000 and/or CDDA sites) within the European union.

This repository contains the created MTA indicator values created from an intersection of the Natura2000 and CDDA databases with the sensitive Article 12 and 17 reporting data.

Filename explanation: 

MTA_{target}_{scale}_{directive}_{biodiversity}_{version}.csv




target
Which target was used for calculations. Currently: 'loglinear'


scale
Which datasets from the reporting was used. Supported currently are EU and MS


directive
Subset either for 'All' species and habitats, or just 'Art12' or 'Art17' data


biodiversity
Subset either for 'All',  'species' or 'habitats' respectively


version
A unique version number for each upload identical with the Zotero version.




 

For further information and a detailed factsheet can be found on the online dashboard here:https://martin-jung.github.io/EUMTA/dashboard.html 

---

* The MTA indicator calculation and the creation of this dashboard contributes to WP7 of the NaturaConnect project. The information here is provided free of charge and the project takes no responsibility for errors or misuse.
DOI: 10.15468/dl.62esd5
title: Occurrence Download

description: A dataset containing 2633 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-117.68523 32.75531,-116.19008 30.29455,-115.78515 29.45353,-114.60149 28.76826,-114.4146 28.05183,-115.22447 27.83379,-114.3523 26.99277,-113.35554 26.68129,-112.88831 26.1829,-112.48337 25.62223,-112.26533 24.43857,-111.33087 23.90904,-110.24066 22.63194,-109.1193 23.00572,-109.33734 23.691,-110.3964 24.03364,-111.05053 25.24844,-111.48661 26.71243,-113.10635 28.55022,-113.51128 29.26664,-114.19656 29.95191,-114.60149 30.60604,-114.97528 31.78969,-113.54243 31.22901,-112.91946 30.73063,-112.29648 29.48468,-111.33087 28.17643,-110.48985 27.02392,-109.96032 26.3075,-109.96032 25.65337,-108.80781 25.06155,-106.68969 23.06802,-105.87982 22.227,-105.56833 21.32369,-106.16016 20.42037,-105.59948 19.42361,-104.54042 18.61374,-103.79285 18.05306,-102.51575 17.52353,-101.61243 17.27434,-99.49431 16.37102,-98.43525 15.74805,-96.37943 15.40541,-94.41705 16.02839,-92.26779 14.34635,-91.67596 15.87264,-90.4923 16.21528,-91.52021 17.46123,-91.14643 17.80387,-89.0906 17.80387,-87.43972 18.64489,-87.50202 20.10888,-86.50525 20.8876,-86.38066 21.88436,-87.15938 22.07126,-89.80703 21.82207,-90.6169 21.13679,-91.70711 19.5482,-93.32685 18.98753,-94.32361 19.01867,-95.22693 19.14327,-96.13024 20.35807,-97.00241 21.41713,-97.3139 23.06802,-97.43849 24.65661,-96.81552 25.84027,-97.59424 26.49439,-98.5287 26.74358,-98.80904 27.24196,-99.55661 28.33217,-100.27303 29.36008,-101.0829 30.16995,-102.6092 30.23225,-103.35677 29.57813,-104.04204 29.85846,-104.69617 31.01097,-106.22246 31.85199,-108.09139 32.10118,-108.40288 31.57165,-111.08168 31.6028,-114.63264 32.97335,-117.68523 32.75531))",
 "TaxonKey is Peromyscus melanocarpus Osgood, 1904"
 ]
}

 The dataset includes 2633 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000854-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14102595
title: Retour utilisation d'un nouveau dispositif intra-utérin par des professionnels de santés (PDS) et satisfaction des patients en France
DOI: 10.5281/zenodo.14102596
title: Retour utilisation d'un nouveau dispositif intra-utérin par des professionnels de santés (PDS) et satisfaction des patients en France
DOI: 10.15468/dl.25s933
title: Occurrence Download

description: A dataset containing 1016 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "Country is one of (United States of America, United States Minor Outlying Islands, American Samoa, Micronesia (Federated States of), Guam, Marshall Islands, Northern Mariana Islands, Puerto Rico, Palau, Virgin Islands (U.S.))",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 },
 {
 "and" : [
 "Geometry POLYGON((-76.34069 43.75966,-84.33874 41.82607,-89.52428 41.91396,-90.49108 34.09169,-84.25085 33.74013,-81.61413 33.91591,-78.27428 36.55263,-76.34069 43.75966))",
 "HasCoordinate is one of (true)",
 "TaxonKey is one of (Gasterosteiformes)"
 ]
 }
 ]
}

 The dataset includes 1016 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000855-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mfkk7n
title: Occurrence Download

description: A dataset containing 636103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen, Living Specimen, Occurrence evidence)",
 "Continent is one of (North America, South America)",
 "OccurrenceStatus is Present",
 "TaxonKey is Hesperiphona vespertina (W.Cooper, 1825)",
 "Year 2004-2024"
 ]
}

 The dataset includes 636103 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000696-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vkquky
title: Occurrence Download

description: A dataset containing 3956 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is North America",
 "Country is United States of America",
 "TaxonKey is Epinephelus itajara (Lichtenstein, 1822)",
 "Year 2000-2020"
 ]
}

 The dataset includes 3956 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000856-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ex2ms7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is one of (Mexico, Guatemala)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Incilius aurarius Mendelson, Mulcahy, Snell, Acevedo & Campbell, 2012"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000857-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9uf74g
title: Occurrence Download

description: A dataset listing the 545 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Global Register of Introduced and Invasive Species - Alaska, United States (ver.2.0, 2022)"
 ]
}

 The dataset's 545 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000823-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uhu9g5
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is A global database for the distributions of crop wild relatives",
 "TaxonKey is Chenopodium hircinum Schrad."
 ]
}

 The dataset includes 18 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000859-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.