cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.811867.v8
title: UNER TAN SYNDROME

description: <strong>"The Uner Tan syndrome is recently identified, and uniquely different neurological disorder" (Guertin, 2013). Actually, t</strong><strong>he first quadruped man was discovered in Turkey and described in Childs' book in 1917. Nearly 100 years later a consanguineous family with 19 children, 6 of them xhibiting a novel syndrome with habitual quadrupedal locomotion, mental retardation, and dysarthric speech with truncal ataxia was reported for the first time in the scientific literature and proposed as UNER TAN syndrome (Tan, 2005, 2006), which sparked a world-wide interest. Since then 8 more families with the syndrome were discovered in various parts of Turkey. </strong>
DOI: 10.6084/m9.figshare.811834.v1
title: MrBayes .p file - 2 partitions, separate rates, with vernal pool species except O. natans constrained to monophyly

description: MrBayes .p file (data file) for the best-fitting, non clock-constrained partitioning scheme (separate trnLF and trnSG partitions, each with their own independent rate), with O. disticha, O. dines, O. dregei and the Bitterfontein taxon forced to monophyly. The remaining vernal pool species, Oxalis natans, is allowed to find its own place in the tree.
DOI: 10.6084/m9.figshare.811867.v7
title: UNER TAN SYNDROME

description: <strong>"The Uner Tan syndrome is recently identified, and uniquely different neurological disorder" (Guertin, 2013). Actually, t</strong><strong>he first quadruped man was discovered in Turkey and described in Childs' book in 1917. Nearly 100 years later a consanguineous family with 19 children, 6 of them xhibiting a novel syndrome with habitual quadrupedal locomotion, mental retardation, and dysarthric speech with truncal ataxia was reported for the first time in the scientific literature and proposed as UNER TAN syndrome (Tan, 2005, 2006), which sparked a world-wide interest. Since then 8 more families with the syndrome were discovered in various parts of Turkey. </strong>
DOI: 10.6084/m9.figshare.811826
title: Towards a draft strategy for increased cooperation

description: This report addresses general high-level policy and strategy coordination that will be needed for Open Biodiversity Knowledge Management (OBKM) to become widely adopted by the many current biodiversity initatives. A centralised and explicit model is unlikely to gain traction, and more progress will be made with a flexible grass roots system that can adapt and evolve as new technologies appear, and as needs and new opportunities arise. An array of recommendations is made in this report, if addressed, to promote Open Biodiversity Knowledge Management.
DOI: 10.6084/m9.figshare.811827
title: BEAST log file - reduced taxa, rate-based

description: log file from the rate-based BEAST analysis of divergence times for aquatic Oxalis, for the reduced data set i.e, excluding taxa with missing data for one partition. The file contains data from three independent BEAST runs, trimmed of burnin
DOI: 10.6084/m9.figshare.811832.v1
title: MrBayes .p file - 2partitions, separate rates

description: Nexus file for the best-fitting, non clock-constrained partitioning scheme (separate trnLF and trnSG partitions, each with their own independent rate).
DOI: 10.6084/m9.figshare.811824
title: BEAST log file - all taxa, rate-based

description: log file from the rate-based BEAST analysis of divergence times for aquatic Oxalis, for all taxa. The file contains data from three independent BEAST runs, trimmed of burnin
DOI: 10.6084/m9.figshare.811825
title: BEAST log file - reduced taxa, node-based

description: log file from the node-based BEAST analysis of divergence times for aquatic Oxalis, for the reduced data set i.e, excluding taxa with missing data for one partition. The file contains data from three independent BEAST runs, trimmed of burnin
DOI: 10.6084/m9.figshare.811823
title: BEAST log file - All taxa, node-based

description: log file from the node-based BEAST analysis of divergence times for aquatic Oxalis, for all taxa. The file contains data from three independent BEAST runs, trimmed of burnin
DOI: 10.6084/m9.figshare.811824.v1
title: BEAST log file - all taxa, rate-based

description: log file from the rate-based BEAST analysis of divergence times for aquatic Oxalis, for all taxa. The file contains data from three independent BEAST runs, trimmed of burnin
DOI: 10.6084/m9.figshare.811825.v1
title: BEAST log file - reduced taxa, node-based

description: log file from the node-based BEAST analysis of divergence times for aquatic Oxalis, for the reduced data set i.e, excluding taxa with missing data for one partition. The file contains data from three independent BEAST runs, trimmed of burnin
DOI: 10.6084/m9.figshare.811826.v1
title: Towards a draft strategy for increased cooperation

description: This report addresses general high-level policy and strategy coordination that will be needed for Open Biodiversity Knowledge Management (OBKM) to become widely adopted by the many current biodiversity initatives. A centralised and explicit model is unlikely to gain traction, and more progress will be made with a flexible grass roots system that can adapt and evolve as new technologies appear, and as needs and new opportunities arise. An array of recommendations is made in this report, if addressed, to promote Open Biodiversity Knowledge Management.
DOI: 10.6084/m9.figshare.811814
title: BEAST xml - reduced taxa, node-based

description: BEAST xml for dating aquatic lineages of Oxalis. In this analysis, the reduced data set, removing taxa with missing data for one partition, is analysed using a node-based approach, calibrating the root of the family Oxalidaceae to that found by Heibl and Renner (2012). The calibration used a normal prior - mean 56.02 mya, st dev 3.5 my.
DOI: 10.6084/m9.figshare.811815
title: BEAST xml - reduced taxa, rate-based

description: BEAST xml for dating aquatic lineages of Oxalis. In this analysis, the reduced data set, removing taxa with missing data for one partition, is analysed using a rate-based approach, allowing the mean rates to vary across both partitions. The calibration used a uniform prior on both mean rates, with minimum value 0 and maximum value 0.0029 s/s/my.
DOI: 10.6084/m9.figshare.811823.v1
title: BEAST log file - All taxa, node-based

description: log file from the node-based BEAST analysis of divergence times for aquatic Oxalis, for all taxa. The file contains data from three independent BEAST runs, trimmed of burnin
DOI: 10.6084/m9.figshare.811827.v1
title: BEAST log file - reduced taxa, rate-based

description: log file from the rate-based BEAST analysis of divergence times for aquatic Oxalis, for the reduced data set i.e, excluding taxa with missing data for one partition. The file contains data from three independent BEAST runs, trimmed of burnin
DOI: 10.6084/m9.figshare.811813
title: BEAST xml - all taxa, rate-based

description: BEAST xml for dating aquatic lineages of Oxalis. In this analysis, the full data set, including taxa with missing data, is analysed using a rate-based approach, allowing the mean rates to vary across both partitions. The calibration used a uniform prior on both mean rates with minimum value 0 and maximum value 0.0029 s/s/my.
DOI: 10.6084/m9.figshare.811813.v1
title: BEAST xml - all taxa, rate-based

description: BEAST xml for dating aquatic lineages of Oxalis. In this analysis, the full data set, including taxa with missing data, is analysed using a rate-based approach, allowing the mean rates to vary across both partitions. The calibration used a uniform prior on both mean rates with minimum value 0 and maximum value 0.0029 s/s/my.
DOI: 10.6084/m9.figshare.811814.v1
title: BEAST xml - reduced taxa, node-based

description: BEAST xml for dating aquatic lineages of Oxalis. In this analysis, the reduced data set, removing taxa with missing data for one partition, is analysed using a node-based approach, calibrating the root of the family Oxalidaceae to that found by Heibl and Renner (2012). The calibration used a normal prior - mean 56.02 mya, st dev 3.5 my.
DOI: 10.6084/m9.figshare.811815.v1
title: BEAST xml - reduced taxa, rate-based

description: BEAST xml for dating aquatic lineages of Oxalis. In this analysis, the reduced data set, removing taxa with missing data for one partition, is analysed using a rate-based approach, allowing the mean rates to vary across both partitions. The calibration used a uniform prior on both mean rates, with minimum value 0 and maximum value 0.0029 s/s/my.
DOI: 10.6084/m9.figshare.811803
title: Data File 2 (spreadsheets 2-5): RT costs of alignment for each condition for the composite face task.

description: RT costs were calculated by subtracting the raw RT for the misaligned condition from the RT for the aligned condition. FH=First half of the experimental block; SH=Second half of the experimental block; I=incongruent, C=congruent. Spreadsheet 2 = Pre-adaptation, First experimental block; Spreadsheet 3 = Pre-adaptation, Second experimental block; Spreadsheet 4 = Post-adaptation, First experimental block; Spreadsheet 5 = Post-adaptation, Second experimental block
DOI: 10.6084/m9.figshare.811807
title: SV2AB and CIP data

description: ATP hydrolysis reactions were conducted at 25°C with purified recombinant SV2-FLAG or commercially available calf intestinal alkaline phosphatase (CIP). An aliquot of CIP was heated at 95 °C for 20 min to inactivate the enzyme. At designated intervals (0 min, 1 min, 2 min, 5 min and 10 min), aliquots were removed from the reaction for analysis by the malachite green assay described as above. Duplicates were assayed for each time point and the average value of the duplicates was used for quantification.
DOI: 10.6084/m9.figshare.811808
title: Standard curve malachite green

description: Standard curve of inorganic phosphate (Pi) in malachite green assay was generated with a 0.02 mM KH2PO4 solution. A serial of standard solution containing different pmol of Pi were added to 950 µl of malachite green solution. Reactions were incubated for 20 min at room temperature. Absorbance at 620 nm was measured in a cuvette with the malachite green solution as a blank. Duplicates were set up for each standard concentration and the average value of the duplicates was used for plotting the standard curve.
DOI: 10.6084/m9.figshare.811812
title: BEAST xml - all taxa, node-based

description: BEAST xml for dating aquatic lineages of Oxalis. In this analysis, the full data set, including taxa with missing data, is analysed using a node-based approach, calibrating the root of the family Oxalidaceae to that found by Heibl and Renner (2012). The calibration used a normal prior - mean 56.02 mya, st dev 3.5 my.
DOI: 10.6084/m9.figshare.811802
title: Data File 1 (spreadsheet 1): Mean pre-, post- and late-test pointing errors for all participants.

description: Values are in degrees of visual angle, with negative numbers indicating a leftward error, and positive values indicating a rightward error.
DOI: 10.6084/m9.figshare.811812.v1
title: BEAST xml - all taxa, node-based

description: BEAST xml for dating aquatic lineages of Oxalis. In this analysis, the full data set, including taxa with missing data, is analysed using a node-based approach, calibrating the root of the family Oxalidaceae to that found by Heibl and Renner (2012). The calibration used a normal prior - mean 56.02 mya, st dev 3.5 my.
DOI: 10.6084/m9.figshare.811801
title: Survey results for Roche et al. PLoS Biology Troubleshooting public data archiving: suggestions to increase participation

description: PDF summarising the results of a survey of editors of Joint Data Archiving Policy journal members, and cvs file of anonymous responses to survey. Survey covers requests by authors for extended data embargoes of greater than one year, and journals' policies on granting extended embargoes.
DOI: 10.6084/m9.figshare.811803.v1
title: Data File 2 (spreadsheets 2-5): RT costs of alignment for each condition for the composite face task.

description: RT costs were calculated by subtracting the raw RT for the misaligned condition from the RT for the aligned condition. FH=First half of the experimental block; SH=Second half of the experimental block; I=incongruent, C=congruent. Spreadsheet 2 = Pre-adaptation, First experimental block; Spreadsheet 3 = Pre-adaptation, Second experimental block; Spreadsheet 4 = Post-adaptation, First experimental block; Spreadsheet 5 = Post-adaptation, Second experimental block
DOI: 10.6084/m9.figshare.811807.v1
title: SV2AB and CIP data

description: ATP hydrolysis reactions were conducted at 25°C with purified recombinant SV2-FLAG or commercially available calf intestinal alkaline phosphatase (CIP). An aliquot of CIP was heated at 95 °C for 20 min to inactivate the enzyme. At designated intervals (0 min, 1 min, 2 min, 5 min and 10 min), aliquots were removed from the reaction for analysis by the malachite green assay described as above. Duplicates were assayed for each time point and the average value of the duplicates was used for quantification.
DOI: 10.6084/m9.figshare.810514
title: D.Sc. Thesis materials

description: Doctoral thesis. Open source probabilistic models for human functional genomics. Includes: the press release, the thesis, and LaTeX sources.
DOI: 10.6084/m9.figshare.811665
title: Sustainable World Syllabus Fall 2013

description: Syllabus for Sustainable World, Fall 2013
DOI: 10.6084/m9.figshare.810514.v1
title: D.Sc. Thesis materials

description: Doctoral thesis. Open source probabilistic models for human functional genomics. Includes: the press release, the thesis, and LaTeX sources.
DOI: 10.6084/m9.figshare.811802.v1
title: Data File 1 (spreadsheet 1): Mean pre-, post- and late-test pointing errors for all participants.

description: Values are in degrees of visual angle, with negative numbers indicating a leftward error, and positive values indicating a rightward error.
DOI: 10.6084/m9.figshare.810512
title: LaTeX sources

description: LaTeX sources for the D.Sc. Thesis
DOI: 10.6084/m9.figshare.811801.v2
title: Survey results for Roche et al. PLoS Biology Troubleshooting public data archiving: suggestions to increase participation

description: PDF summarising the results of a survey of editors of Joint Data Archiving Policy journal members. Survey covers requests by authors for extended data embargoes of greater than one year, and journals' policies on granting extended embargoes.
DOI: 10.6084/m9.figshare.811665.v1
title: Sustainable World Syllabus Fall 2013

description: Syllabus for Sustainable World, Fall 2013
DOI: 10.6084/m9.figshare.810509
title: Gaussian Job Archive for C18H25NO4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810512.v2
title: LaTeX sources

description: LaTeX sources for the D.Sc. Thesis
DOI: 10.6084/m9.figshare.810488
title: Data from: Effects of anthropogenic salinisation on biological traits and community composition of stream macroinvertebrates.

description: Szöcs, E., Eckhard Coring, Jürgen Bäthe, Ralf B. Schäfer (2014). Data from: Effects of anthropogenic salinisation on biological traits and community composition of stream macroinvertebrates. Science of the Total Environment 468–469: 943–949. http://www.sciencedirect.com/science/article/pii/S0048969713009728 Data and R-script to reproduce our findings. Note: Only the trait-analysis can be reproduced. Data for trait-frequencies and electric conductivity is provided within the project-folder.<br>Abundance data is propietary and cannot be provided. Nevertheless code for data-cleaning and abundance-analysis is provided here, but commented out. For further details please read the README file.
DOI: 10.6084/m9.figshare.810509.v1
title: Gaussian Job Archive for C18H25NO4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810479
title: Gaussian Job Archive for C4H12Si

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810480
title: Venesky et al (J Animal Ecology) data

description: Data used for dilution effect manuscript (Journal of Animal Ecology)
DOI: 10.6084/m9.figshare.810488.v1
title: Data from: Effects of anthropogenic salinisation on biological traits and community composition of stream macroinvertebrates.

description: Szöcs, E., Eckhard Coring, Jürgen Bäthe, Ralf B. Schäfer (2014). Data from: Effects of anthropogenic salinisation on biological traits and community composition of stream macroinvertebrates. Science of the Total Environment 468–469: 943–949. http://www.sciencedirect.com/science/article/pii/S0048969713009728 Data and R-script to reproduce our findings. Note: Only the trait-analysis can be reproduced. Data for trait-frequencies and electric conductivity is provided within the project-folder.<br>Abundance data is propietary and cannot be provided. Nevertheless code for data-cleaning and abundance-analysis is provided here, but commented out. For further details please read the README file.
DOI: 10.6084/m9.figshare.810512.v1
title: LaTeX sources

description: LaTeX sources for the D.Sc. Thesis
DOI: 10.6084/m9.figshare.810477
title: Gaussian Job Archive for C4H12Si

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810478
title: Gaussian Job Archive for C4H12Si

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810479.v1
title: Gaussian Job Archive for C4H12Si

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810480.v1
title: Venesky et al (J Animal Ecology) data

description: Data used for dilution effect manuscript (Journal of Animal Ecology)
DOI: 10.6084/m9.figshare.810476
title: Gaussian Job Archive for C4H12Si

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810477.v1
title: Gaussian Job Archive for C4H12Si

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810478.v1
title: Gaussian Job Archive for C4H12Si

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810463
title: Gaussian Job Archive for C18H25NO4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810476.v1
title: Gaussian Job Archive for C4H12Si

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810462
title: New Approaches in Joints Pain - Tennis Elbow

description: New Approaches in Joints Pain
DOI: 10.6084/m9.figshare.810463.v1
title: Gaussian Job Archive for C18H25NO4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810442
title: Dissertation Supplementary Files

description: <strong>Purpose</strong> These are a collection of supplementary files that are to be included in my dissertation. They include but are not limited to small IPython notebooks, extra figures, data-sets that are too large to publish in the main document such as full ortholog lists and other primary data. <strong>Viewing IPython notebooks (ipynb files)</strong> To view an IPython notebook, "right-click" its download link and select "Copy link address". Then navigate to the the free notebook viewer by following this link: http://nbviewer.ipython.org/. Finally, paste the link to the ipynb file that you copied into the URL form on the nbviewer page and click "Go".
DOI: 10.6084/m9.figshare.810445
title: Gaussian Job Archive for C8H16Cl4N4O6Ru2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810462.v2
title: New Approaches in Joints Pain - Tennis Elbow

description: New Approaches in Joints Pain
DOI: 10.6084/m9.figshare.810462.v1
title: New Approaches in Joints Pain - Tennis Elbow

description: New Approaches in Joints Pain
DOI: 10.6084/m9.figshare.810445.v1
title: Gaussian Job Archive for C8H16Cl4N4O6Ru2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810442.v1
title: Dissertation Supplementary Files

description: <strong>Purpose</strong> These are a collection of supplementary files that are to be included in my dissertation. They include but are not limited to small IPython notebooks, extra figures, data-sets that are too large to publish in the main document such as full ortholog lists and other primary data. <strong>Viewing IPython notebooks (ipynb files)</strong> To view an IPython notebook, "right-click" its download link and select "Copy link address". Then navigate to the the free notebook viewer by following this link: http://nbviewer.ipython.org/. Finally, paste the link to the ipynb file that you copied into the URL form on the nbviewer page and click "Go".
DOI: 10.6084/m9.figshare.810421
title: Tenthredo sulphuripes group

description: Selection of pictures of several species of the <em>Tenthredo sulphuripes</em> group: <em>Tenthredo sulphuripes sulphuripes</em> (KRIECHBAUMER, 1869) <em>Tenthredo erasina</em> MALAISE, 1945 (= <em>Tenthredo flavipleuris</em> MUCHE, 1986) <em>Tenthredo huesingi</em> KOCH, 1984 <em>Tenthredo sulphuripes muchei</em> KOCH, 1985 <em><br></em>
DOI: 10.6084/m9.figshare.810411
title: Article

description: Article is about financial distress forecasting based on development cycle of company
DOI: 10.6084/m9.figshare.810414
title: Gaussian Job Archive for C18H25NO4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.810419
title: Tenthredo huesingi Koch, 1984

description: <strong><em>Tenthredo (Tenthredo) huesingi</em></strong> KOCH, 1984 Type locality: Mongolia: Bajanchongor Aimak, 30 km S Bogd. "Die Variabilität der Spezies beschränkt sich nicht auf die Fühlerform, sondern ist auch in der Skulptur (Punkturstärke und -dichte, mit oder ohne Mikroskulptur), der Kopfform (...) und der Färbung sichtbar. (...) Durch die aufgeführte Variabilität ist die Art nur schwer zu charakterisieren bzw. zu bestimmen. Sie ist der <em>Tenthredo-sulphuripes</em>-Gruppe zuzuordnen." (Taeger 1992). Koch, F. 1984: Vier neue Tenthrediniden aus der Mongolischen Volksrepublik (Hymenoptera). - Deutsche entomologische Zeitschrift, Neue Folge, Berlin 31(1-3): 15-22 Taeger, A. 1992: Fünfter Beitrag zur Systematik der Blattwespengattung <em>Tenthredo</em> L. (Hymenoptera, Symphyta). - Beiträge zur Entomologie, Berlin 42(1): 3-53, p. 41.
DOI: 10.6084/m9.figshare.810419.v1
title: Tenthredo huesingi Koch, 1984

description: <strong><em>Tenthredo (Tenthredo) huesingi</em></strong> KOCH, 1984 Type locality: Mongolia: Bajanchongor Aimak, 30 km S Bogd. "Die Variabilität der Spezies beschränkt sich nicht auf die Fühlerform, sondern ist auch in der Skulptur (Punkturstärke und -dichte, mit oder ohne Mikroskulptur), der Kopfform (...) und der Färbung sichtbar. (...) Durch die aufgeführte Variabilität ist die Art nur schwer zu charakterisieren bzw. zu bestimmen. Sie ist der <em>Tenthredo-sulphuripes</em>-Gruppe zuzuordnen." (Taeger 1992). Koch, F. 1984: Vier neue Tenthrediniden aus der Mongolischen Volksrepublik (Hymenoptera). - Deutsche entomologische Zeitschrift, Neue Folge, Berlin 31(1-3): 15-22 Taeger, A. 1992: Fünfter Beitrag zur Systematik der Blattwespengattung <em>Tenthredo</em> L. (Hymenoptera, Symphyta). - Beiträge zur Entomologie, Berlin 42(1): 3-53, p. 41.