cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pb4j2v
title: Occurrence Download

description: A dataset containing 1391 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hydrochoerus isthmius Goldman, 1912"
 ]
}

 The dataset includes 1391 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059890-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m48mzm
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Olax gossweileri Exell & Mendonça"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059891-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w54f89
title: Occurrence Download

description: A dataset containing 158 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Noccaea minima (Ard.) F.K.Mey."
 ]
}

 The dataset includes 158 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059893-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7yq47w
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myrmecodia platytyrea Becc."
 ]
}

 The dataset includes 112 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059892-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6zc9qf
title: Occurrence Download

description: A dataset containing 28228587 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Colombia"
 ]
}

 The dataset includes 28228587 records from 4553 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059754-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15151/esrf-es-1299138509
title: Molecular machines in energy transduction, cellular signaling and defense processes

description: Since this BAG is composed of seven different working groups from three different locations (university of Cologne, university of Bochum, university of Düsseldorf), the projects for this proposal are of rather heterogeneous nature. Nonetheless, we are focusing on 5 main topics: 1.) proteins involved in transport processes, transporters or channels, either embedded in the membrane or acting in the cytosol (e.g. ABC transporters, fusion proteins, regulators) 2.) proteins involved in the immune system, pathogen invasion or defense/resistance processes (dehydratases, toxins, binding proteins) 3.) proteins involved or associated with diseases like cancer or developmental disorders (e.g. protein kinase, toxins, antibodies) 4.) enzymes of putative industrial use to encounter increasing environmental pollution (e.g. transaminases, estereases) 5.) proteins involved in light harvesting, photosynthesis (C3/C4 pathways) and chromophore binding proteins (e.g. synthases, photosensor domains)
DOI: 10.15151/esrf-es-1308967329
title: Development of novel small molecules to target cellular pathways

description: Small molecules represent powerful tools to dissect physiological and pathological states of signaling pathways, yet require characterization through X-ray crystallography. This proposal encompasses the investigation of new classes of small molecules that target difficult proteins and non-typical binding sites. This includes the development of supramolecular compounds or cyclic peptides to address “non-druggable" proteins. The main collaborative research fields are tackling Ras protein signaling with structure-guided ligand design, developing inhibitors of the Ras-binding protein PDEd, screening of a novel sp3-enriched fragment library or targeting genetic regulators. Cellular signaling will also be addressed through the structural analysis of deubiquitinating enzymes or regulators of the kinetochore. Finally, we plan to crystallize membrane proteins including GPCRs in order to understand their biological function, characterize their ligand specificity and develop novel regulators.
DOI: 10.15151/esrf-es-1308963857
title: Study of the on-off photoswitching of mEmerald at cryogenic temperature

description: mEmerald is a GFP-derived fluorescent protein that showed a tendency to reversibly photoswitch between an "on" fluorescent state and an "off" non-fluorescent state under cryogenic conditions. It has been used to this purpose in super-resolution PALM imaging. Usually, reversibly switchable fluorecent proteins (RSFPs) photoswitch via the ci-trans isomerization of their chromophore. Such major reorganizations are prevented by cryogenic conditions and the efficient roomtemperature photoswitching of most of the existing RSFPs is abolished at low temperatures. mEmerald seems to be one of the rare exceptions but its photophysical mechanism remains to be elucidated. After having solved the high resolution 3D structure of the initial green-emiting form of the protein, I would like to solve the structure of photoswitched form at cryogenic temperature (100K), and correlate this structure with the corresponding absorption and/or emission spectra either measured offline or, if possible, online.
DOI: 10.15151/esrf-es-1308544099
title: Microvascular disease induced osteocytic matrix changes in type 2 diabetic bone

description: Patients with type 2 diabetes are at higher risk of sustaining a hip fracture despite having normal or even increased bone mass. Bone is resorbed and formed continuously in a process that is regulated by several hormones and cells, including osteocytes, which are embedded in the bone tissue. Our preliminary data shows that microvascular disease, a well-known type 2 diabetes-related complication, is associated with enlarged osteocyte lacunae. We hypothesise that the bone matrix surrounding the enlarged osteocyte lacunae differs in mineral and collagen composition compared to bone matrix surrounding the smaller osteocyte lacunae from patients without microvascular diseases. We aim to test the hypothesis by high resolution scanning of thin bone slices from adult patients with type 2 diabetes with or without microvascular disease.
DOI: 10.15151/esrf-es-1308544350
title: Ptychography of the changes in glass by fs laser inscription

description: We aim to collect high-resolution three-dimensional information on the distribution of electron density in subwavelength photonic structures to convert into a refractive index. We will study samples fabricated by fs-laser writing, a technique to induce changes in transparent materials spanning void formation to 10^-3 index changes, widely employed for creating optical waveguides and scattering materials. Obtaining such high-resolution information on the induced material changes yields fundamental understanding of the writing process and the limits of its reproducibility, which directly aids design of integrated photonic circuits and deterministic scattering materials, while simultaneously exploring the limitations of near-field ptychography at ID16A.
DOI: 10.15151/esrf-es-1255149896
title: Composition-dependent magnetism in intrinsic magnetic topological insulators

description: Topological materials have attracted great research interest with the promise of developing novel electronic devices with new functionalities. Among these materials, MnBi2Te4 is the first intrinsic magnetic topological insulator (TI) that can experimentally achieve quantized edge conductance at certain thicknesses. Further, by replacing Bi with Sb, the Weyl semimetal (WSM) phase can be induced in the material. Here, we propose a systematic study of the magnetism of a Mn(Bi1-xSbx)2Te4 series of topological TI/WSM films with varying Bi:Sb ratio, grown by molecular beam epitaxy. This composition-ratio dependent study will help to reveal the intimate relation between topology and magnetism in intrinsic magnetic TI/WSMs, and therefore promote the development of high-efficiency spintronic applications in topological materials.
DOI: 10.6084/m9.figshare.24186408.v1
title: Supplementary Material for: Favorable Impact of Serum TERT C228T for Prognosis after Surgical Resection for Liver Cancer

description: <b><i>Introduction:</i></b> Personalized medicine and molecular therapies with the diagnosis of somatic genetic alterations are expected to be developed for liver cancer. Nevertheless, it is unknown whether a mutation in the telomere reverse transcriptase promoter (TERT C228T) in serum cfDNA might be useful for making prognostic predictions after surgical resection for primary liver cancer. <b><i>Methods:</i></b> This cohort study retrospectively investigated 111 patients who had undergone surgical resection of liver cancer for the first time. We investigated the differences between clinicopathological features and prognosis according to classification of three tumor markers, including AFP, PIVKAII, and TERT C228T. <b><i>Results:</i></b> Multivariate analysis identified etiology (fatty liver disease vs. HBV odds ratio [OR] 6.853) and fibrosis stage (2–4, OR: 0.137) as determinants of TERT C228T-positive liver cancer with normal levels of AFP and PIVKAII (TERT single positive liver cancer). TERT single positive (Yes, OR: 0.301), fibrosis (FIB)-4 index (≥3.25, OR: 2.038), Child-Pugh classification (B, OR: 4.975), and number of tumors (≥2, OR: 4.098) were identified as determinants of the recurrence of liver cancer. TERT single positive (Yes, OR: 3.311), FIB-4 index (≥3.25, OR: 0.433), and number of tumors (≥2, OR: 0.262) were identified as determinants of disease-free survival. <b><i>Conclusions:</i></b> Our results highlight the impact of classification of prognostic tumor markers. TERT single positive is one predictor of favorable prognosis after surgical resection for liver cancer.
DOI: 10.5281/zenodo.8369601
title: The Mode-2 Internal Solitary Wave Mooring Observations in Andaman Sea

description: Observation Data of the Second Mode Internal Solitary Waves in Central Andaman Sea (10.17°N, 95.47°E).
DOI: 10.5281/zenodo.8369600
title: The Mode-2 Internal Solitary Wave Mooring Observations in Andaman Sea

description: Observation Data of the Second Mode Internal Solitary Waves in Central Andaman Sea (10.17°N, 95.47°E).
DOI: 10.21227/kgga-6047
title: Dataset with Adversarial Attack on Deep Learning for Modulation Classification

description: This dataset contains adversarial attacks on Deep Learning (DL) when it is employed for the classification ofwireless modulated communication signals. The attack is executed with an obfuscating waveform that is embedded in thetransmitted signal in such a way that prevents the extraction of clean data for training from a wireless eavesdropper. At thesame time it allows a legitimate receiver (LRx) to demodulate the data. The scheme works for both single carrier and multi-carrierorthogonal frequency division multiplexing (OFDM) waveforms and can be implemented as part of frame-based wireless protocols.The related paper that we ask to be cited is by D. Varkatzas and A. Argyriou that appears in IEEE MILCOM 2023.
DOI: 10.21227/6szh-qd43
title: Dataset with Adversarial Attack on Deep Learning for Modulation Classification

description: This dataset contains adversarial attacks on Deep Learning (DL) when it is employed for the classification of wireless modulated communication signals. The attack is executed with an obfuscating waveform that is embedded in the transmitted signal in such a way that prevents the extraction of clean data for training from a wireless eavesdropper. At the same time it allows a legitimate receiver (LRx) to demodulate the data. The scheme works for both single carrier and multi-carrier orthogonal frequency division multiplexing (OFDM) waveforms and can be implemented as part of frame-based wireless protocols.The related paper that we ask to be cited if you use this dataset is by D. Varkatzas and A. Argyriou that appears in IEEE MILCOM 2023: Limitations of Deep Learning for Modulation Classification of Obfuscated Wireless Signals.
DOI: 10.6084/m9.figshare.24186477
title: Data for 10.3389/fonc.2023.1238607

description: Datasets for article 10.3389/fonc.2023.1238607
DOI: 10.5281/zenodo.8362157
title: NEEM seasonal dO18 data for "Climate information preserved in seasonal water isotope at NEEM: relationships with temperature, circulation and sea ice"

description: NEEM seasonal dO18 data over the period 1855-2004. <strong>Please cite the following reference when using the data:</strong> Zheng, M., Sjolte, J., Adolphi, F., Vinther, B. M., Steen-Larsen, H. C., Popp, T. J., and Muscheler, R.: Climate information preserved in seasonal water isotope at NEEM: relationships with temperature, circulation and sea ice, Climate of the Past, 14, 1067-1078, https://doi.org/10.5194/cp-14-1067-2018, 2018.
description: {"references": ["Zheng, M., Sjolte, J., Adolphi, F., Vinther, B. M., Steen-Larsen, H. C., Popp, T. J., and Muscheler, R.: Climate information preserved in seasonal water isotope at NEEM: relationships with temperature, circulation and sea ice, Climate of the Past, 14, 1067-1078, https://doi.org/10.5194/cp-14-1067-2018, 2018."]}
DOI: 10.5281/zenodo.8362156
title: NEEM seasonal dO18 data for "Climate information preserved in seasonal water isotope at NEEM: relationships with temperature, circulation and sea ice"

description: NEEM seasonal dO18 data over the period 1855-2004. <strong>Please cite the following reference when using the data:</strong> Zheng, M., Sjolte, J., Adolphi, F., Vinther, B. M., Steen-Larsen, H. C., Popp, T. J., and Muscheler, R.: Climate information preserved in seasonal water isotope at NEEM: relationships with temperature, circulation and sea ice, Climate of the Past, 14, 1067-1078, https://doi.org/10.5194/cp-14-1067-2018, 2018.
description: {"references": ["Zheng, M., Sjolte, J., Adolphi, F., Vinther, B. M., Steen-Larsen, H. C., Popp, T. J., and Muscheler, R.: Climate information preserved in seasonal water isotope at NEEM: relationships with temperature, circulation and sea ice, Climate of the Past, 14, 1067-1078, https://doi.org/10.5194/cp-14-1067-2018, 2018."]}
DOI: 10.5281/zenodo.8226743
title: Solar, atmospheric and volcanic impacts on 10Be depositions in Greenland and Antarctica during the last 100 years

description: EGRIP <sup>10</sup>Be Data for the paper: "Solar, atmospheric and volcanic impacts on <sup>10</sup>Be depositions in Greenland and Antarctica during the last 100 years" in <em>Journal of Geophysical Research: Atmospheres</em> This version 1 is uploaded mistakenly with the old time scale. <em>DO NOT USE THIS VERSION, PLEASE USE THE DATA FROM VERSION 2. </em>
DOI: 10.5517/ccdc.csd.cc283dph
title: CCDC 2088646: Experimental Crystal Structure Determination

description: Related Article: Bai-Tong Liu, Sheng-Hao Gong, Xiao-Tian Jiang, Yuan Zhang, Rui Wang, Zhijie Chen, Shuo Zhang, Kent O. Kirlikovali, Tian-Fu Liu, Omar K. Farha, Rong Cao |2023|Nat. Synth.|2|873|doi:10.1038/s44160-023-00316-4
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc283dqj
title: CCDC 2088647: Experimental Crystal Structure Determination

description: Related Article: Bai-Tong Liu, Sheng-Hao Gong, Xiao-Tian Jiang, Yuan Zhang, Rui Wang, Zhijie Chen, Shuo Zhang, Kent O. Kirlikovali, Tian-Fu Liu, Omar K. Farha, Rong Cao |2023|Nat. Synth.|2|873|doi:10.1038/s44160-023-00316-4
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f5j8f
title: CCDC 2239634: Experimental Crystal Structure Determination

description: Related Article: Bai-Tong Liu, Sheng-Hao Gong, Xiao-Tian Jiang, Yuan Zhang, Rui Wang, Zhijie Chen, Shuo Zhang, Kent O. Kirlikovali, Tian-Fu Liu, Omar K. Farha, Rong Cao |2023|Nat. Synth.|2|873|doi:10.1038/s44160-023-00316-4
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.24186522
title: 其他数据集上的可视化结果

description: The visualization results on other datasets.
DOI: 10.6084/m9.figshare.24083842
title: Adaptive governance: a challenge to Brazilian metropolitan regions

description: Abstract The purpose of this article is to present a theoretical discussion about the institutional dimension of the concept of adaptive governance. We discuss examples of this institutional dimension based on an analysis of the limits to the implementation of adaptive governance in Brazilian metropolises, based on: 1) the financial resources available to the environmental management of municipalities belonging to metropolitan regions; 2) the creation of an institutional arrangement for climate governance in the municipality of Rio de Janeiro. Despite the incremental aspect, the analyzed data indicate the low fiscal relevance of the environmental issue, as well as difficulties in implementing governance arrangements that succeed in providing transversal planning capacity, mechanisms for the integrated action of different agents, and incentives to an enhanced participatory dynamics in the formulation and implementation of climate policies.
DOI: 10.6084/m9.figshare.24083842.v1
title: Adaptive governance: a challenge to Brazilian metropolitan regions

description: Abstract The purpose of this article is to present a theoretical discussion about the institutional dimension of the concept of adaptive governance. We discuss examples of this institutional dimension based on an analysis of the limits to the implementation of adaptive governance in Brazilian metropolises, based on: 1) the financial resources available to the environmental management of municipalities belonging to metropolitan regions; 2) the creation of an institutional arrangement for climate governance in the municipality of Rio de Janeiro. Despite the incremental aspect, the analyzed data indicate the low fiscal relevance of the environmental issue, as well as difficulties in implementing governance arrangements that succeed in providing transversal planning capacity, mechanisms for the integrated action of different agents, and incentives to an enhanced participatory dynamics in the formulation and implementation of climate policies.
DOI: 10.34740/kaggle/dsv/6523288
title: Corups Kabyle
DOI: 10.6084/m9.figshare.23300472
title: Perceptions of the impact of the Covid-19 pandemic on the lives of children and adolescents with cystic fibrosis

description: Abstract This article describes the impact of the Covid-19 pandemic on the lives of children and adolescents with cystic fibrosis (CF) from the perspective of their parents and guardians. We conducted an exploratory study with 27 parents and guardians of children and adolescents with CF using a questionnaire. Drawing on Minayo, we performed a thematic analysis of the responses to the questionnaires, identifying three core categories: the impacts of the Covid-19 pandemic on the care of children with CF; the impact of social isolation on the lives of patients and their families; and uncertainties and fears generated by the pandemic. The findings suggest that the pandemic aggravated difficulties experienced by the patients, disrupted health care, and caused both physical and mental strain. Teleconsultations avoid the discontinuation of health care. Reliable information can prevent the spread of Covid-19 and mitigate the stressors that generate fear and insecurity. Actions to improve access to information should be developed.
DOI: 10.6084/m9.figshare.23300472.v1
title: Perceptions of the impact of the Covid-19 pandemic on the lives of children and adolescents with cystic fibrosis

description: Abstract This article describes the impact of the Covid-19 pandemic on the lives of children and adolescents with cystic fibrosis (CF) from the perspective of their parents and guardians. We conducted an exploratory study with 27 parents and guardians of children and adolescents with CF using a questionnaire. Drawing on Minayo, we performed a thematic analysis of the responses to the questionnaires, identifying three core categories: the impacts of the Covid-19 pandemic on the care of children with CF; the impact of social isolation on the lives of patients and their families; and uncertainties and fears generated by the pandemic. The findings suggest that the pandemic aggravated difficulties experienced by the patients, disrupted health care, and caused both physical and mental strain. Teleconsultations avoid the discontinuation of health care. Reliable information can prevent the spread of Covid-19 and mitigate the stressors that generate fear and insecurity. Actions to improve access to information should be developed.
DOI: 10.34740/kaggle/dsv/6135603
title: Dengue Dataset of Bangladesh
DOI: 10.5281/zenodo.6512467
title: Generalized Deception Dataset

description: We took labeled datasets from five different deception-detection tasks with no licensing issues and converted them to a standard format. We inspected each dataset for quality and generated new cleaned versions. Task # Deceptive # Truthful Product Reviews 10493 10481 Phishing 6134 9202 Job Scams 608 13735 Political Statements 5669 7167 Fake News 27486 34615 Our data is structured as five jsonlines files (one for each task) with a text to classify and a Boolean is_deceptive label. Sample data point: <pre><code>{ "text":"the Annies List political group supports third-trimester abortions on demand.", "is_deceptive":true } </code></pre> Changelog <strong>1.1</strong> Fixed flipped labels in the job scams dataset.
description: This work was completed in part with resources provided by the Research Computing Data Core at the University of Houston and supported in part by NSF grants DGE 1433817, CCF 1950297, ARO award W911NF-20-1-0254, and ONR award N00014-19-S-F009.
description: {"references": ["Pawan Kumar Verma, Prateek Agrawal, and Radu Prodan. 2021. WELFake dataset for fake news detection in text data. https://doi.org/10.5281/zenodo.4561253", "Sokratis Vidros, Constantinos Kolias, Georgios Kambourakis, and Leman Akoglu. 2017. Automatic Detection of Online Recruitment Frauds: Characteristics, Methods, and a Public Dataset. Future Internet 9, 1 (2017).", "Rakesh M Verma, Victor Zeng, and Houtan Faridi. 2019. Data quality for security challenges: Case studies of phishing, malware, and intrusion detection datasets. In Proc. ACM SIGSAC Conf. on Computer and Communications Security. 2605\u20132607.", "Tariq Alhindi, Savvas Petridis, and Smaranda Muresan. 2018. Where is your Evidence: Improving Fact-checking by Justification Modeling. In Proceedings of the First Workshop on Fact Extraction and VERification (FEVER). 85\u201390"]}