cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7234925.v1
title: rev P-hack dataset.xls

description: The data were analysed for the presence of selective reporting of non-significance and/or reverse P-hacking in the field of behavioural ecology.<br>On 1 February 2018, we searched for articles published between 1990 and 2018 in three leading behavioural ecology journals: <i>Animal Behaviour, Behavioral Ecology</i>, and <i>Behavioral Ecology and Sociobiology,</i> that had ‘experiment* AND control*’ in the ‘topic’ category in the ISI Web of Science database (1081 articles). We then searched these articles for tests of whether the mean value of confounding variables differed between treatment(s) and control groups where subjects were randomly assigned to groups. We only included confounding variables that involved measurements made on test subjects or groups of subjects (e.g. body mass, blood glucose, brood size). To identify papers with suitable data, we first read Abstract, Methods and Results to see if there was any indication that the study was likely to include tests for confounding variables differing between control and treatment groups (i.e. studies that involved experimental manipulation). We recorded: the name of the confounding variable, P-values or statistical significance statements associated with tests for a difference, the sample sizes.
DOI: 10.6084/m9.figshare.7234925.v2
title: Reverse P-hacking: when non-significant results are preferred

description: The data were analysed for the presence of selective reporting of non-significance and/or reverse P-hacking in the field of behavioural ecology.<br>On 1 February 2018, we searched for articles published between 1990 and 2018 in three leading behavioural ecology journals: <i>Animal Behaviour, Behavioral Ecology</i>, and <i>Behavioral Ecology and Sociobiology,</i> that had ‘experiment* AND control*’ in the ‘topic’ category in the ISI Web of Science database (1081 articles). We then searched these articles for tests of whether the mean value of confounding variables differed between treatment(s) and control groups where subjects were randomly assigned to groups. We only included confounding variables that involved measurements made on test subjects or groups of subjects (e.g. body mass, blood glucose, brood size). To identify papers with suitable data, we first read Abstract, Methods and Results to see if there was any indication that the study was likely to include tests for confounding variables differing between control and treatment groups (i.e. studies that involved experimental manipulation). We recorded: the name of the confounding variable, P-values or statistical significance statements associated with tests for a difference, the sample sizes.
DOI: 10.7284/117497
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SP1505 using a Hawaii UHDAS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7234925.v3
title: Reverse P-hacking: when non-significant results are preferred (dataset)

description: The data were analysed for the presence of selective reporting of non-significance and/or reverse P-hacking in the field of behavioural ecology.<br>On 1 February 2018, we searched for articles published between 1990 and 2018 in three leading behavioural ecology journals: <i>Animal Behaviour, Behavioral Ecology</i>, and <i>Behavioral Ecology and Sociobiology,</i> that had ‘experiment* AND control*’ in the ‘topic’ category in the ISI Web of Science database (1081 articles). We then searched these articles for tests of whether the mean value of confounding variables differed between treatment(s) and control groups where subjects were randomly assigned to groups. We only included confounding variables that involved measurements made on test subjects or groups of subjects (e.g. body mass, blood glucose, brood size). To identify papers with suitable data, we first read Abstract, Methods and Results to see if there was any indication that the study was likely to include tests for confounding variables differing between control and treatment groups (i.e. studies that involved experimental manipulation). We recorded: the name of the confounding variable, P-values or statistical significance statements associated with tests for a difference, the sample sizes.
DOI: 10.7284/124417
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise SP1505 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7234925.v4
title: Reverse P-hacking: when non-significant results are preferred (dataset)

description: The data were analysed for the presence of selective reporting of non-significance and/or reverse P-hacking in the field of behavioural ecology.<br>On 1 February 2018, we searched for articles published between 1990 and 2018 in three leading behavioural ecology journals: <i>Animal Behaviour, Behavioral Ecology</i>, and <i>Behavioral Ecology and Sociobiology,</i> that had ‘experiment* AND control*’ in the ‘topic’ category in the ISI Web of Science database (1081 articles). We then searched these articles for tests of whether the mean value of confounding variables differed between treatment(s) and control groups where subjects were randomly assigned to groups. We only included confounding variables that involved measurements made on test subjects or groups of subjects (e.g. body mass, blood glucose, brood size). To identify papers with suitable data, we first read Abstract, Methods and Results to see if there was any indication that the study was likely to include tests for confounding variables differing between control and treatment groups (i.e. studies that involved experimental manipulation). We recorded: the name of the confounding variable, P-values or statistical significance statements associated with tests for a difference, the sample sizes.
DOI: 10.6084/m9.figshare.7234925.v5
title: Reverse P-hacking: when non-significant results are preferred (dataset)

description: The data were analysed for the presence of selective reporting of non-significance and/or reverse P-hacking in the field of behavioural ecology.<br>On 1 February 2018, we searched for articles published between 1990 and 2018 in three leading behavioural ecology journals: <i>Animal Behaviour, Behavioral Ecology</i>, and <i>Behavioral Ecology and Sociobiology,</i> that had ‘experiment* AND control*’ in the ‘topic’ category in the ISI Web of Science database (1081 articles). We then searched these articles for tests of whether the mean value of confounding variables differed between treatment(s) and control groups where subjects were randomly assigned to groups. We only included confounding variables that involved measurements made on test subjects or groups of subjects (e.g. body mass, blood glucose, brood size). To identify papers with suitable data, we first read Abstract, Methods and Results to see if there was any indication that the study was likely to include tests for confounding variables differing between control and treatment groups (i.e. studies that involved experimental manipulation). We recorded: the name of the confounding variable, P-values or statistical significance statements associated with tests for a difference, the sample sizes.
DOI: 10.7284/117498
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1505 using a Furuno GP-90D instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7234925.v6
title: Reverse P-hacking: when non-significant results are preferred (dataset)

description: The data were analysed for the presence of selective reporting of non-significance and/or reverse P-hacking in the field of behavioural ecology.<br>On 1 February 2018, we searched for articles published between 1990 and 2018 in three leading behavioural ecology journals: <i>Animal Behaviour, Behavioral Ecology</i>, and <i>Behavioral Ecology and Sociobiology,</i> that had ‘experiment* AND control*’ in the ‘topic’ category in the ISI Web of Science database (1081 articles). We then searched these articles for tests of whether the mean value of confounding variables differed between treatment(s) and control groups where subjects were randomly assigned to groups. We only included confounding variables that involved measurements made on test subjects or groups of subjects (e.g. body mass, blood glucose, brood size). To identify papers with suitable data, we first read Abstract, Methods and Results to see if there was any indication that the study was likely to include tests for confounding variables differing between control and treatment groups (i.e. studies that involved experimental manipulation). We recorded: the name of the confounding variable, P-values or statistical significance statements associated with tests for a difference, the sample sizes.
DOI: 10.7284/117501
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1505 using a Furuno GP-150 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7234895
title: Aqualitas Diatoms Database 10 species

description: Database of diatoms samples from 10 different species, as used in the Aqualitas Project from VISILAB Research Group.<br>This dataset is provided only for research purposes and the following reference and citation should be stated:<br>'The dataset has been generated and provided thanks to the Aqualitas-Retos project funded by the Spanish Goverment Ref. CTM2014-51907-C2-2-R-MINECO (http://aqualitas-retos.es/en/), further information and results obtained may be found at the following articles: - Bueno, G., Deniz, O., Pedraza, A., Ruiz-Santaquiteria, J., Salido, J., Cristóbal, G., Borrego-Ramos, M. and Blanco, S. (2017). Automated diatom classification (Part A): handcrafted feature approaches. Applied Sciences, 7(8), 753<br>- Pedraza, A., Bueno, G., Deniz, O., Cristóbal, G., Blanco, S., and Borrego-Ramos, M. (2017). Automated diatom classification (Part B): a deep learning approach. Applied Sciences, 7(5), 460.
DOI: 10.6084/m9.figshare.7234925.v7
title: Reverse P-hacking: when non-significant results are preferred (dataset)

description: The data were analysed for the presence of selective reporting of non-significance and/or reverse P-hacking in the field of behavioural ecology.<br>On 1 February 2018, we searched for articles published between 1990 and 2018 in three leading behavioural ecology journals: <i>Animal Behaviour, Behavioral Ecology</i>, and <i>Behavioral Ecology and Sociobiology,</i> that had ‘experiment* AND control*’ in the ‘topic’ category in the ISI Web of Science database (1081 articles). We then searched these articles for tests of whether the mean value of confounding variables differed between treatment(s) and control groups where subjects were randomly assigned to groups. We only included confounding variables that involved measurements made on test subjects or groups of subjects (e.g. body mass, blood glucose, brood size). To identify papers with suitable data, we first read Abstract, Methods and Results to see if there was any indication that the study was likely to include tests for confounding variables differing between control and treatment groups (i.e. studies that involved experimental manipulation). We recorded: the name of the confounding variable, P-values or statistical significance statements associated with tests for a difference, the sample sizes.
DOI: 10.7284/120777
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1505 using a Ashtech ADU2 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120792
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1505 using a Garmin GPS-17HVS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120839
title: Gyrocompass data collected during research cruise SP1505 using a Furuno Furuno SC-30 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/117500
title: Meteorological Station data collected during research cruise SP1505 using a SIO MET-System instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7234763
title: Combined traffic control and route choice optimization for traffic networks with disruptive changes

description: We present a combined traffic control and route choice optimization (CTCRCO) system to quickly find new traffic equilibrium solutions in urban road networks with significant changes. The system iteratively executes a control module which combines a traffic control system (TCS) and a traffic simulation manager (TSM) and an assignment module which combines a route set manager (RSM) and a route choice system (RCS), thus can optimize both traffic flows and route choices for minimizing average travel time of vehicles. We evaluate CTCRCO by testing various traffic scenarios in real-world road networks with significant changes. The results show that TCS and RCS are both significant for achieving a quick and low-cost convergence to an approximate equilibrium in a road network with significant changes. Approximate simulations not only accelerate convergence processes for non-congested cases, but also bypass potential gridlock states for over-congestion cases. The role of different path-finding procedures is also examined.
DOI: 10.6084/m9.figshare.7234763.v1
title: Combined traffic control and route choice optimization for traffic networks with disruptive changes

description: We present a combined traffic control and route choice optimization (CTCRCO) system to quickly find new traffic equilibrium solutions in urban road networks with significant changes. The system iteratively executes a control module which combines a traffic control system (TCS) and a traffic simulation manager (TSM) and an assignment module which combines a route set manager (RSM) and a route choice system (RCS), thus can optimize both traffic flows and route choices for minimizing average travel time of vehicles. We evaluate CTCRCO by testing various traffic scenarios in real-world road networks with significant changes. The results show that TCS and RCS are both significant for achieving a quick and low-cost convergence to an approximate equilibrium in a road network with significant changes. Approximate simulations not only accelerate convergence processes for non-congested cases, but also bypass potential gridlock states for over-congestion cases. The role of different path-finding procedures is also examined.
DOI: 10.7284/117499
title: Winch data collected during research cruise SP1505 using a Markey DEYSH-3 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/117502
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SP1506 using a Hawaii UHDAS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25375/uct.7234742
title: MAPS SA - Model Results

description: Results File for MAPS stranded assets paper.
DOI: 10.25375/uct.7234742.v1
title: MAPS SA - Model Results

description: Results File for MAPS stranded assets paper.
DOI: 10.6084/m9.figshare.7234733
title: Phylogenies reported in "Transcriptomics illuminates the invasive lifestyle of the salmon gut pathogen Spironucleus salmonicida"

description: Phylogenetic datasets for genes discussed in Stairs et al. (in prep).<br><br>Each zip file contains five files with the following suffixes.<br><br>*.fasta -- Dataset (taxa IDs and taxonomy are included in the fasta headers)<br>*.ma.fasta -- Mafft-linsi alignment<br>*.ma.bm.fasta -- Mafft-linsi alignment masked with BMGE<br>*.log -- IQTREE log file<br>*.treefile -- IQTREE tree file<br><br><br><br><br>
DOI: 10.7284/124418
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise SP1506 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7234733.v2
title: Phylogenies reported in "Transcriptomics illuminates the invasive lifestyle of the salmon gut pathogen Spironucleus salmonicida"

description: Phylogenetic datasets for genes discussed in Stairs et al. (in prep).<br><br>Each zip file contains five files with the following suffixes.<br><br>*.fasta -- Dataset (taxa IDs and taxonomy are included in the fasta headers)<br>*.ma.fasta -- Mafft-linsi alignment<br>*.ma.bm.fasta -- Mafft-linsi alignment masked with BMGE<br>*.log -- IQTREE log file<br>*.treefile -- IQTREE tree file<br><br><br><br><br>
DOI: 10.7284/117503
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1506 using a Furuno GP-90D instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7234733.v1
title: Phylogenies

description: Phylogenetic datasets for genes discussed in Stairs et al. (in prep).<br><br>Each zip file contains five files with the following suffixes.<br><br>*.fasta -- Dataset (taxa IDs and taxonomy are included in the fasta headers)<br>*.ma.fasta -- Mafft-linsi alignment<br>*.ma.bm.fasta -- Mafft-linsi alignment masked with BMGE<br>*.log -- IQTREE log file<br>*.treefile -- IQTREE tree file<br><br><br><br><br>
DOI: 10.7284/117506
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1506 using a Furuno GP-150 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120778
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1506 using a Ashtech ADU2 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7234682
title: Supplementary Material for: Association between Atrial Fibrillation and Aortic Aneurysms: A Population-Based Cohort Study

description: <b><i>Objective:</i></b> Atrial fibrillation (AF) is the most common form of sustained arrhythmia. Several molecular pathways associated with the pathogenesis of AF also participate in the initiation and progression of aortic aneurysm (AA). In this study, we aimed to evaluate potential associations between AA and AF. <b><i>Patients and Methods:</i></b> The data for this nationwide population-based retrospective cohort study were obtained from Taiwan’s National Health Insurance Research Database (NHIRD). All medical conditions for each case and the controls were categorized using the 9th revision of the International Classification of Diseases (ICD-9). Odds ratios and 95% confidence intervals for associations between AF and AA were estimated using Cox regression and adjusted for comorbidities. <b><i>Results:</i></b> Our analyses included 116,225 AF cases and 116,225 propensity score-matched controls. Compared with the controls, the patients with AF exhibited a significantly increased risk of developing an AA (adjusted hazard ratio, HR 1.243, <i>p</i> &lt; 0.001). Another cohort of 19,776 patients diagnosed with AA were identified, and 19,776 propensity score-matched patients were included as controls. Patients who had AA were also at an increased risk of developing AF (adjusted HR 1.187, <i>p</i> &lt; 0.001). Heart failure (HF) was a common risk factor for both AA and AF. <b><i>Conclusion:</i></b> There are associations between AF and AA. HF is a mutual risk factor for the development of AF and AA.
DOI: 10.7284/120793
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1506 using a Garmin GPS-17HVS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7234682.v1
title: Supplementary Material for: Association between Atrial Fibrillation and Aortic Aneurysms: A Population-Based Cohort Study

description: <b><i>Objective:</i></b> Atrial fibrillation (AF) is the most common form of sustained arrhythmia. Several molecular pathways associated with the pathogenesis of AF also participate in the initiation and progression of aortic aneurysm (AA). In this study, we aimed to evaluate potential associations between AA and AF. <b><i>Patients and Methods:</i></b> The data for this nationwide population-based retrospective cohort study were obtained from Taiwan’s National Health Insurance Research Database (NHIRD). All medical conditions for each case and the controls were categorized using the 9th revision of the International Classification of Diseases (ICD-9). Odds ratios and 95% confidence intervals for associations between AF and AA were estimated using Cox regression and adjusted for comorbidities. <b><i>Results:</i></b> Our analyses included 116,225 AF cases and 116,225 propensity score-matched controls. Compared with the controls, the patients with AF exhibited a significantly increased risk of developing an AA (adjusted hazard ratio, HR 1.243, <i>p</i> &lt; 0.001). Another cohort of 19,776 patients diagnosed with AA were identified, and 19,776 propensity score-matched patients were included as controls. Patients who had AA were also at an increased risk of developing AF (adjusted HR 1.187, <i>p</i> &lt; 0.001). Heart failure (HF) was a common risk factor for both AA and AF. <b><i>Conclusion:</i></b> There are associations between AF and AA. HF is a mutual risk factor for the development of AF and AA.
DOI: 10.6084/m9.figshare.7234676
title: Historical land use dataset of the Carpathian region (1819–1980)

description: We produced the first spatially explicit, cross-border, digital map of long-term (160 years) land use in the Carpathian Ecoregion, the Hungarian part of the Pannonian plains and the historical region of Moravia in the Czech Republic. We mapped land use in a regular 2 × 2 km point grid. Our dataset comprises of 91,310 points covering 365,240 km<sup>2</sup> in seven countries (Czechia, Slovakia, Austria, Hungary, Poland, Ukraine and Romania). We digitized three time layers: (1) for the Habsburg period, we used maps of the second Habsburg military survey from years 1819–1873 at the scale 1:28,800 and the Szatmari's maps from years 1855–1858 at scale 1:57,600; (2) The World Wars period was covered by national topographic maps from years 1915–1945 and scales here ranged between 1:20,000–1:100,000; and (3) the Socialist period was mapped from national topographic maps for the years 1950–1983 at scales between 1:25,000–1:50,000. We collected metadata about the years of mapping and map sources. We used a hierarchical legend for our maps, so that the land use classification for the entire region consisted of 9 categories at the most general level and of 22 categories depending on the period and a country.
DOI: 10.7284/120840
title: Gyrocompass data collected during research cruise SP1506 using a Furuno Furuno SC-30 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/117505
title: Meteorological Station data collected during research cruise SP1506 using a SIO MET-System instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition