cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7899510
title: Ensemble Ecological Niche Models and Biodiversity Index for 2019 of 96 European Marine Species based on Ecological Niche Models developed with Artificial Neural Networks, Maximum Entropy, and Support Vector Machines at 0.1° Resolution

description: Ensemble Ecological Niche Models for 2019 of 96 European marine species of particular commercial and conservation interest, based on Ecological Niche Models developed with (i) Artificial Neural Networks, (ii) Maximum Entropy, and (iii) Support Vector Machines at 0.1° Resolution. The data report, for each 0.1° cell, how many models (from 0 to 3) overcome a model-specific decision threshold to assess species presence in the cell. A Biodiversity Index is also provided as the count of the number of species (among the 96) potentially present in each 0.1° cell according to the ensemble models. For each ensemble model, a threshold of at least 2 models agreeing on species presence in the cell was used to indicate species presence.
DOI: 10.5517/ccdc.csd.cc2f54f6
title: CCDC 2239267: Experimental Crystal Structure Determination

description: Related Article: Yun-Shan Xue, Xin-Yue Zhang, Zheng-Chen Tian, Jia-Hao Dai, Yin Wang, Ru-Xiu Tang, Zheng-Hao Fei, Jun Wang|2023|J.Mol.Struct.|1287|135667|doi:10.1016/j.molstruc.2023.135667
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f6lt2
title: CCDC 2240674: Experimental Crystal Structure Determination

description: Related Article: Yang Luo, Robert B. Grossman, Xiao-Bin Nie, Xing-Wei Yang|2023|Chem.Commun.|59|6215|doi:10.1039/D3CC01268A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f6n2d
title: CCDC 2240713: Experimental Crystal Structure Determination

description: Related Article: Jugal Kishore Rai Deka, Debashree Borah, Paramesh Das, Biswajit Sahariah, Pratap Vishnoi, Bani Kanta Sarma|2023|Chem.Commun.|59|6080|doi:10.1039/D3CC01494K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7958596
title: Ensemble Ecological Niche Models and Biodiversity Index for 2019 of 96 European Marine Species based on Ecological Niche Models developed with Artificial Neural Networks, Maximum Entropy, AquaMaps, and Support Vector Machines at 0.1° Resolution

description: Ensemble Ecological Niche Models for 2019 of 96 European marine species of particular commercial and conservation interest, based on Ecological Niche Models developed with (i) Artificial Neural Networks, (ii) Maximum Entropy, (iii) Support Vector Machines, and (iv) AquaMaps at 0.1° Resolution. The data report, for each 0.1° cell, how many models (from 0 to 4) overcome a model-specific decision threshold to assess species presence in the cell. A Biodiversity Index is also provided as the count of the number of species (among the 96) potentially present in each 0.1° cell according to the ensemble models. For each ensemble model, a threshold of at least 3 models agreeing on species presence in the cell was used to indicate species presence.
DOI: 10.5281/zenodo.7485938
title: Ensemble Ecological Niche Models and Biodiversity Index for 2019 of 96 European Marine Species based on Ecological Niche Models developed with Artificial Neural Networks, Maximum Entropy, AquaMaps, and Support Vector Machines at 0.1° Resolution

description: Ensemble Ecological Niche Models for 2019 of 96 European marine species of particular commercial and conservation interest, based on Ecological Niche Models developed with (i) Artificial Neural Networks, (ii) Maximum Entropy, (iii) Support Vector Machines, and (iv) AquaMaps at 0.1° Resolution. The data report, for each 0.1° cell, how many models (from 0 to 4) overcome a model-specific decision threshold to assess species presence in the cell. A Biodiversity Index is also provided as the count of the number of species (among the 96) potentially present in each 0.1° cell according to the ensemble models. For each ensemble model, a threshold of at least 3 models agreeing on species presence in the cell was used to indicate species presence.
DOI: 10.34740/kaggle/dsv/5747144
title: USFDA Medical Devices 2023
DOI: 10.5517/ccdc.csd.cc2f6vfy
title: CCDC 2240910: Experimental Crystal Structure Determination

description: Related Article: Jugal Kishore Rai Deka, Debashree Borah, Paramesh Das, Biswajit Sahariah, Pratap Vishnoi, Bani Kanta Sarma|2023|Chem.Commun.|59|6080|doi:10.1039/D3CC01494K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f8sl3
title: CCDC 2242775: Experimental Crystal Structure Determination

description: Related Article: Andrei V. Zaitsev, Sergey S. Kiselev, Alexander F. Smol'yakov, Yury V. Fedorov, Elena G. Kononova, Yurii A. Borisov, Valentina A. Ol'shevskaya|2023|Org.Biomol.Chem.|21|4084|doi:10.1039/D3OB00255A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f8sm4
title: CCDC 2242776: Experimental Crystal Structure Determination

description: Related Article: Andrei V. Zaitsev, Sergey S. Kiselev, Alexander F. Smol'yakov, Yury V. Fedorov, Elena G. Kononova, Yurii A. Borisov, Valentina A. Ol'shevskaya|2023|Org.Biomol.Chem.|21|4084|doi:10.1039/D3OB00255A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fbm6m
title: CCDC 2244530: Experimental Crystal Structure Determination

description: Related Article: Ryuichi Nishiyori, Taiki Mori, Seiji Shirakawa|2023|Org.Biomol.Chem.|21|4002|doi:10.1039/D3OB00555K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fbm7n
title: CCDC 2244531: Experimental Crystal Structure Determination

description: Related Article: Ryuichi Nishiyori, Taiki Mori, Seiji Shirakawa|2023|Org.Biomol.Chem.|21|4002|doi:10.1039/D3OB00555K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dbt7t
title: CCDC 2214926: Experimental Crystal Structure Determination

description: Related Article: Kulbir, Akshaya Keerthi C. S, Sulthana Beegam, Sandip Das, Prabhakar Bhardwaj, Mursaleem Ansari, Kuldeep Singh, Pankaj Kumar|2023|Inorg.Chem.|62|7385|doi:10.1021/acs.inorgchem.3c00639
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7958563
title: Ecological Niche Models of 96 European Marine Species, for 2019, developed with AquaMaps, Artificial Neural Networks, Maximum Entropy, and Support Vector Machines at 0.1° Resolution

description: Native ecological niche models of 96 European marine species of particular commercial and conservation interest developed with AquaMaps, Artificial Neural Networks, Maximum Entropy, and Support Vector Machines, for 2019 at 0.1° spatial resolution.
DOI: 10.5281/zenodo.7361121
title: Ecological Niche Models of 96 European Marine Species, for 2019, developed with AquaMaps, Artificial Neural Networks, Maximum Entropy, and Support Vector Machines at 0.1° Resolution

description: Native ecological niche models of 96 European marine species of particular commercial and conservation interest developed with AquaMaps, Artificial Neural Networks, Maximum Entropy, and Support Vector Machines, for 2019 at 0.1° spatial resolution.
DOI: 10.5281/zenodo.7958843
title: SciExpeM - 10.5281/zenodo.7958843

description: Sun et al., Combustion and Flame 236 (2022) 111799
DOI: 10.5281/zenodo.7958842
title: SciExpeM - 10.5281/zenodo.7958843

description: Sun et al., Combustion and Flame 236 (2022) 111799
DOI: 10.5281/zenodo.7958846
title: ancula_gibbosa_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.7958845
title: ancula_gibbosa_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.15151/esrf-es-1209936304
title: Projects in protein crystallography of GSY

description: The Synchrotron Group of IBS has two activities. The first one is focused on instrumentation and methodology development, and includes developments that range from crystallization to room temperature data collection. The second one deals with the structure elucidation of fluorescent proteins, plant proteins and proteins of human health interest. We work on enzymes of the MEP pathway since they constitute interesting drug targets. We study also fluorescent proteins by combining Xray diffraction and online spectro. We are involved in the characterization of the plastid-encoded prokaryotic-type RNA polymerase (PEP) and transcription factors (ARFs) from plants. We try to improve crystal quality for X-ray and neutron diffraction.
DOI: 10.5281/zenodo.7958866
title: corambe_burchi_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.7958865
title: corambe_burchi_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.7523409
title: Data from: A novel strategy based on Zn(II) porphyrins and silver nanoparticles to photoinactivate Candida albicans

description: Data supporting the figures presented in the research article "A novel strategy based on Zn(II) porphyrins and silver nanoparticles to photoinactivate <em>Candida albicans"</em> <strong>Background:</strong> Photodynamic inactivation (PDI) has been an attractive alternative to treat <em>Candida albicans</em> infections, especially considering the spread of resistant strains. The combination of the photophysical advantages of Zn(II) porphyrins (ZnPs) and the plasmonic effect of silver nanoparticles (AgNPs) has the potential to further improve PDI. In this context, this study aimed to evaluate PDI action in <em>C. albicans</em> using ZnTnHex-2-PyP<sup>4+</sup> or ZnTE-2-PyP<sup>4+</sup> associated with AgNPs. <strong>Methods:</strong> AgNPs stabilized with polyvinylpyrrolidone (PVP) were chosen to allow for (i) overlap between NP extinction and ZnP absorption spectra and (ii) favor AgNPs-ZnPs contact; prerequisites for exploring the plasmonic effect. Optical and zeta potential (ζ) characterizations were performed, and ROS generation was also evaluated. Yeasts were incubated with ZnPs alone or in combination with AgNPs (AgNPs-ZnPs systems), at various concentrations of ZnPs and two proportions of AgNPs, then irradiated with a blue LED. Interactions between yeasts and the systems (ZnP alone or AgNPs-ZnPs) were evaluated by fluorescence microscopy. <strong>Results:</strong> Subtle spectroscopic changes were observed for ZnPs after association with AgNPs, and the ζ analyses confirmed AgNPs-ZnPs interaction. PDI using ZnP-hexyl (0.8 µM) and ZnP-ethyl (5.0 µM) promoted a 3 and 2 log<sub>10</sub> reduction of yeasts, respectively. On the other hand, AgNPs-ZnP-hexyl (0.2 µM) and AgNPs-ZnP-ethyl (0.6 µM) systems led to complete fungal eradication under the same parameters and lower porphyrin concentrations. An increase in the ROS level was observed when ZnPs were associated with AgNPs. Enhanced interaction of yeasts with AgNPs-ZnPs was observed, when compared with ZnPs alone. <strong>Conclusion:</strong> We hypothesize that the plasmonic effect combined with the greater interactions between cells and AgNPs-ZnPs systems resulted in an efficient and improved <em>C. albicans</em> yeast PDI, encouraging further developments toward inactivation of resistant <em>Candida</em> spp.
description: This research was funded by Wellcome Trust, grant 219677_Z_19_Z; Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq, 406450/2021-8, 314241/2021-3, 424159/2018-0); Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco (FACEPE, APQ-0573-2.09/18); and Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP, nº 2018/20226-7). This study is also associated with the Instituto Nacional de Ciência e Tecnologia em Fotônica (INCT-INFo). The APC was funded by Wellcome Trust. GP acknowledges financial support to CESAM by FCT/MCTES (UIDP/50017/2020+UIDB/50017/2020+LA/P/0094/2020), through national funds.
DOI: 10.5281/zenodo.7523408
title: Data from: A novel strategy based on Zn(II) porphyrins and silver nanoparticles to photoinactivate Candida albicans

description: Data supporting the figures presented in the research article "A novel strategy based on Zn(II) porphyrins and silver nanoparticles to photoinactivate <em>Candida albicans"</em> <strong>Background:</strong> Photodynamic inactivation (PDI) has been an attractive alternative to treat <em>Candida albicans</em> infections, especially considering the spread of resistant strains. The combination of the photophysical advantages of Zn(II) porphyrins (ZnPs) and the plasmonic effect of silver nanoparticles (AgNPs) has the potential to further improve PDI. In this context, this study aimed to evaluate PDI action in <em>C. albicans</em> using ZnTnHex-2-PyP<sup>4+</sup> or ZnTE-2-PyP<sup>4+</sup> associated with AgNPs. <strong>Methods:</strong> AgNPs stabilized with polyvinylpyrrolidone (PVP) were chosen to allow for (i) overlap between NP extinction and ZnP absorption spectra and (ii) favor AgNPs-ZnPs contact; prerequisites for exploring the plasmonic effect. Optical and zeta potential (ζ) characterizations were performed, and ROS generation was also evaluated. Yeasts were incubated with ZnPs alone or in combination with AgNPs (AgNPs-ZnPs systems), at various concentrations of ZnPs and two proportions of AgNPs, then irradiated with a blue LED. Interactions between yeasts and the systems (ZnP alone or AgNPs-ZnPs) were evaluated by fluorescence microscopy. <strong>Results:</strong> Subtle spectroscopic changes were observed for ZnPs after association with AgNPs, and the ζ analyses confirmed AgNPs-ZnPs interaction. PDI using ZnP-hexyl (0.8 µM) and ZnP-ethyl (5.0 µM) promoted a 3 and 2 log<sub>10</sub> reduction of yeasts, respectively. On the other hand, AgNPs-ZnP-hexyl (0.2 µM) and AgNPs-ZnP-ethyl (0.6 µM) systems led to complete fungal eradication under the same parameters and lower porphyrin concentrations. An increase in the ROS level was observed when ZnPs were associated with AgNPs. Enhanced interaction of yeasts with AgNPs-ZnPs was observed, when compared with ZnPs alone. <strong>Conclusion:</strong> We hypothesize that the plasmonic effect combined with the greater interactions between cells and AgNPs-ZnPs systems resulted in an efficient and improved <em>C. albicans</em> yeast PDI, encouraging further developments toward inactivation of resistant <em>Candida</em> spp.
description: This research was funded by Wellcome Trust, grant 219677_Z_19_Z; Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq, 406450/2021-8, 314241/2021-3, 424159/2018-0); Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco (FACEPE, APQ-0573-2.09/18); and Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP, nº 2018/20226-7). This study is also associated with the Instituto Nacional de Ciência e Tecnologia em Fotônica (INCT-INFo). The APC was funded by Wellcome Trust. GP acknowledges financial support to CESAM by FCT/MCTES (UIDP/50017/2020+UIDB/50017/2020+LA/P/0094/2020), through national funds.
DOI: 10.5281/zenodo.7958987
title: *-koatē/-škoatē inchoative verbs in Skolt and Kola Saami dialects

description: The file contains two sets of data concerning *<em>-koatē/-škoatē</em> inchoative verbs in Skolt and Kola Saami dialects. The first one is a schematic representation of the verbs found in KKLS [1] (alphabetical span of A–K) with a focus on the derivational variants *<em>-koatē</em> vs. *<em>-škoatē</em>. Two versions are presented on separate sheets, one with a single alphabetical listing and another with grouping according to the (original) syllable count of the verb base. The columns P...V code the variants occurring in different dialects (codes: k = *-koatē, s = *-škoatē, ks = both). [1] KKLS = T. I. Itkonen 1958: <em>Koltan- ja kuolanlapin sanakirja. Wörterbuch des Kolta- und Kolalappischen</em>. I–II. Helsinki: Société Finno-Ougrienne. The second data set contains the *<em>-koatē/-škoatē</em> verb lexemes found in Szabó 1968 and 1987 [2, 3]. The data is grouped according to (original) syllable count, suffix variant (*<em>-koatē</em> vs. *<em>-škoatē</em>) and language area (Kildin vs. Ter [Turja]). Only one occurrence of each derivative lexeme is quoted. [2] Szabó, László 1968: <em>Kolalappische Volksdichtung (Texte aus den Dialekten in Kildin und Ter)</em>. Zweiter Teil nebst grammatischen Aufzeichnungen. Göttingen: Vandenhoeck & Ruprecht. [3] Szabó, László 1987: The use of the inchoative in Kola-Sami sentences. – <em>Nordlyd </em>13: 70–103. This is a data set supplement of: Kuokkala, J. (2019). Saami -<em>(š)goahti</em> inchoatives: their variation, history, and suggested cognates in Veps and Mordvin. <em>Suomalais-Ugrilaisen Seuran Aikakauskirja</em> 97, 153–181. https://doi.org/10.33340/susa.75718
DOI: 10.5281/zenodo.7958985
title: *-koatē/-škoatē inchoative verbs in Skolt and Kola Saami dialects

description: The file contains two sets of data concerning *<em>-koatē/-škoatē</em> inchoative verbs in Skolt and Kola Saami dialects. The first one is a schematic representation of the verbs found in KKLS [1] (alphabetical span of A–K) with a focus on the derivational variants *<em>-koatē</em> vs. *<em>-škoatē</em>. Two versions are presented on separate sheets, one with a single alphabetical listing and another with grouping according to the (original) syllable count of the verb base. The columns P...V code the variants occurring in different dialects (codes: k = *-koatē, s = *-škoatē, ks = both). [1] KKLS = T. I. Itkonen 1958: <em>Koltan- ja kuolanlapin sanakirja. Wörterbuch des Kolta- und Kolalappischen</em>. I–II. Helsinki: Société Finno-Ougrienne. The second data set contains the *<em>-koatē/-škoatē</em> verb lexemes found in Szabó 1968 and 1987 [2, 3]. The data is grouped according to (original) syllable count, suffix variant (*<em>-koatē</em> vs. *<em>-škoatē</em>) and language area (Kildin vs. Ter [Turja]). Only one occurrence of each derivative lexeme is quoted. [2] Szabó, László 1968: <em>Kolalappische Volksdichtung (Texte aus den Dialekten in Kildin und Ter)</em>. Zweiter Teil nebst grammatischen Aufzeichnungen. Göttingen: Vandenhoeck & Ruprecht. [3] Szabó, László 1987: The use of the inchoative in Kola-Sami sentences. – <em>Nordlyd </em>13: 70–103. This is a data set supplement of: Kuokkala, J. (2019). Saami -<em>(š)goahti</em> inchoatives: their variation, history, and suggested cognates in Veps and Mordvin. <em>Suomalais-Ugrilaisen Seuran Aikakauskirja</em> 97, 153–181. https://doi.org/10.33340/susa.75718
DOI: 10.5281/zenodo.7958967
title: Inchoative -gyettiđ/-škyettiđ verbs in Inarilappisches Wörterbuch

description: Lexical data extracted from (a scanned version of): InLpWb = Inarilappisches Wörterbuch 1–3. Compiled by Erkki Itkonen. Société Finno-Ougrienne, Helsinki 1986–1989. The table contains all the verbs with a suffix -gyettiđ/-guáttiđ or -škyettiđ/-škuáttiđ in InLpWb. Derivational bases and ultimate root lexemes are given when possible. A semantic categorization of inchoative/momentative/translative is provided for the -gyettiđ/-guáttiđ verbs. This is a data set supplement of: Kuokkala, J. (2019). Saami <em>-(š)goahti</em> inchoatives: their variation, history, and suggested cognates in Veps and Mordvin. <em>Suomalais-Ugrilaisen Seuran Aikakauskirja</em> 97, 153–181. https://doi.org/10.33340/susa.75718
DOI: 10.5281/zenodo.7958966
title: Inchoative -gyettiđ/-škyettiđ verbs in Inarilappisches Wörterbuch

description: Lexical data extracted from (a scanned version of): InLpWb = Inarilappisches Wörterbuch 1–3. Compiled by Erkki Itkonen. Société Finno-Ougrienne, Helsinki 1986–1989. The table contains all the verbs with a suffix -gyettiđ/-guáttiđ or -škyettiđ/-škuáttiđ in InLpWb. Derivational bases and ultimate root lexemes are given when possible. A semantic categorization of inchoative/momentative/translative is provided for the -gyettiđ/-guáttiđ verbs. This is a data set supplement of: Kuokkala, J. (2019). Saami <em>-(š)goahti</em> inchoatives: their variation, history, and suggested cognates in Veps and Mordvin. <em>Suomalais-Ugrilaisen Seuran Aikakauskirja</em> 97, 153–181. https://doi.org/10.33340/susa.75718
DOI: 10.5517/ccdc.csd.cc285mwz
title: CCDC 2090791: Experimental Crystal Structure Determination

description: Related Article: Sara Nasiri Sovari, Isabelle Kolly, Kevin Schindler, Ana Djuric, Tatjana Srdic-Rajic, Aurelien Crochet, Aleksandar Pavic, Fabio Zobi|2023|Dalton Trans.|52|6934|doi:10.1039/D2DT04041G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc285mx0
title: CCDC 2090792: Experimental Crystal Structure Determination

description: Related Article: Sara Nasiri Sovari, Isabelle Kolly, Kevin Schindler, Ana Djuric, Tatjana Srdic-Rajic, Aurelien Crochet, Aleksandar Pavic, Fabio Zobi|2023|Dalton Trans.|52|6934|doi:10.1039/D2DT04041G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.