cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.73x3ke
title: Occurrence Download

description: A dataset listing the 11 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-152.61622 -17.87006,-18.38378 -17.87006,-18.38378 35.87006,-152.61622 35.87006,-152.61622 -17.87006))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arremon aurantiirostris"
 ]
}

 The dataset's 11 records were derived from 153 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021192-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29061594
title: Cholecalciferol alleviates testicular dysfunction in experimental hyperthyroidism via antioxidant, anti-inflammatory and antiapoptotic effects

description: This study aimed to investigate the possible protective effect of cholecalciferol against testicular dysfunction in L-thyroxine-induced hyperthyroid rat model. Twenty-four adult male rats were divided into three groups: control, hyperthyroid, and hyperthyroid cholecalciferol treated. At the end of four weeks, serum samples were collected for measurement of thyroid hormones, testosterone, and serum inflammatory markers (interleukin-6 and tumour necrosis factor-alpha). Thereafter, malondialdehyde and antioxidant enzymes were assessed in the testicular homogenate. Also, histological and immunohistochemical studies of the testicular tissues were done. The current results showed lower serum testosterone and testes weight in hyperthyroid rats than control group, with significantly elevated serum inflammatory markers, and disturbed oxidant/antioxidant status in the testicular tissues. This was associated with structural abnormalities. Immunohistochemical study showed upregulation of caspase-3 and downregulation of proliferating cell nuclear antigen (PCNA) in hyperthyroid rats. Cholecalciferol supplementation significantly improved the testicular dysfunction and the testicular pathological features in the hyperthyroid rats. It significantly decreased the levels of serum inflammatory markers and malondialdehyde levels. Also, cholecalciferol supplementation increased the activity of the antioxidant enzymes in the testicular tissue, downregulated caspase-3 and upregulated PCNA in the testicular tissues. Cholecalciferol could ameliorate pathophysiological changes in rat testes of hyperthyroid rats.
DOI: 10.6084/m9.figshare.29061594.v1
title: Cholecalciferol alleviates testicular dysfunction in experimental hyperthyroidism via antioxidant, anti-inflammatory and antiapoptotic effects

description: This study aimed to investigate the possible protective effect of cholecalciferol against testicular dysfunction in L-thyroxine-induced hyperthyroid rat model. Twenty-four adult male rats were divided into three groups: control, hyperthyroid, and hyperthyroid cholecalciferol treated. At the end of four weeks, serum samples were collected for measurement of thyroid hormones, testosterone, and serum inflammatory markers (interleukin-6 and tumour necrosis factor-alpha). Thereafter, malondialdehyde and antioxidant enzymes were assessed in the testicular homogenate. Also, histological and immunohistochemical studies of the testicular tissues were done. The current results showed lower serum testosterone and testes weight in hyperthyroid rats than control group, with significantly elevated serum inflammatory markers, and disturbed oxidant/antioxidant status in the testicular tissues. This was associated with structural abnormalities. Immunohistochemical study showed upregulation of caspase-3 and downregulation of proliferating cell nuclear antigen (PCNA) in hyperthyroid rats. Cholecalciferol supplementation significantly improved the testicular dysfunction and the testicular pathological features in the hyperthyroid rats. It significantly decreased the levels of serum inflammatory markers and malondialdehyde levels. Also, cholecalciferol supplementation increased the activity of the antioxidant enzymes in the testicular tissue, downregulated caspase-3 and upregulated PCNA in the testicular tissues. Cholecalciferol could ameliorate pathophysiological changes in rat testes of hyperthyroid rats.
DOI: 10.6084/m9.figshare.29071939
title: Comparable hepatocellular metabolomic signatures under glucose and palmitic acid treatment relative to butyrate in relation to metabolic dysfunction-associated fatty liver disease

description: Among the dietary factors, glucose, and fatty acids are known to trigger fatty liver disease, while butyrate attenuates steatosis. To decipher the hepatocellular altered metabolome under nutrient perturbation relevant to fatty liver disease. HepG2 cells were cultured under the influence of sub-lethal doses of glucose, palmitic acid (PA), and butyrate. Following the treatment, intracellular metabolites were extracted and derivatized for GCMS analysis. Chemical class enrichment, metabolic pathway analysis, and metabolomic interactome analysis were undertaken. Glucose, PA and butyrate caused loss of cell viability at 160 mM, 1600 µM, and 40 mM concentration, respectively. A total of 39, 47, 52, and 51 metabolites were identified in control, glucose, PA, and butyrate, respectively, among which 2-ethylhexanoic acid in control and 2-ethylhexan-1-ol in glucose, PA and butyrate were the most abundant metabolites. Pathways related to the mitochondrial electron transport chain were highly enriched in glucose and PA treatments, leading to increased free radicals. The metabolites identified under glucose and PA treatment were linked to the metabolomic markers of metabolic liver diseases. Our data showed that the hepatocellular metabolome of HepG2 cells under glucose and PA treatment is closely related, while the metabolome and pathways associated with butyrate treatment are associated with energy metabolism and alleviation of fatty liver.
DOI: 10.6084/m9.figshare.29071939.v1
title: Comparable hepatocellular metabolomic signatures under glucose and palmitic acid treatment relative to butyrate in relation to metabolic dysfunction-associated fatty liver disease

description: Among the dietary factors, glucose, and fatty acids are known to trigger fatty liver disease, while butyrate attenuates steatosis. To decipher the hepatocellular altered metabolome under nutrient perturbation relevant to fatty liver disease. HepG2 cells were cultured under the influence of sub-lethal doses of glucose, palmitic acid (PA), and butyrate. Following the treatment, intracellular metabolites were extracted and derivatized for GCMS analysis. Chemical class enrichment, metabolic pathway analysis, and metabolomic interactome analysis were undertaken. Glucose, PA and butyrate caused loss of cell viability at 160 mM, 1600 µM, and 40 mM concentration, respectively. A total of 39, 47, 52, and 51 metabolites were identified in control, glucose, PA, and butyrate, respectively, among which 2-ethylhexanoic acid in control and 2-ethylhexan-1-ol in glucose, PA and butyrate were the most abundant metabolites. Pathways related to the mitochondrial electron transport chain were highly enriched in glucose and PA treatments, leading to increased free radicals. The metabolites identified under glucose and PA treatment were linked to the metabolomic markers of metabolic liver diseases. Our data showed that the hepatocellular metabolome of HepG2 cells under glucose and PA treatment is closely related, while the metabolome and pathways associated with butyrate treatment are associated with energy metabolism and alleviation of fatty liver.
DOI: 10.15468/dl.9zqkpy
title: Occurrence Download

description: A dataset containing 213040 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-11-06",
 "EventDate is less than or equal to 2025-12-06",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 },
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 213040 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021196-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30757616
title: Identification of PCIF1-interacting proteins in HaCaT cells under UVB irradiation using immunoprecipitation and LC-MS/MS

description: This dataset characterizes proteins that interact with PCIF1 in human keratinocyte (HaCaT) cells under UVB irradiation. Using FLAG-tag affinity enrichment followed by mass spectrometry-based proteomics, proteins associated with PCIF1 were identified and quantified. The study provides insight into UVB-dependent and independent interactions of PCIF1, enabling further investigation into its cellular functions and regulatory roles in keratinocyte biology. These data serve as a resource for understanding PCIF1-mediated signaling pathways and protein networks in response to UVB stress.
DOI: 10.6084/m9.figshare.30757616.v1
title: Identification of PCIF1-interacting proteins in HaCaT cells under UVB irradiation using immunoprecipitation and LC-MS/MS

description: This dataset characterizes proteins that interact with PCIF1 in human keratinocyte (HaCaT) cells under UVB irradiation. Using FLAG-tag affinity enrichment followed by mass spectrometry-based proteomics, proteins associated with PCIF1 were identified and quantified. The study provides insight into UVB-dependent and independent interactions of PCIF1, enabling further investigation into its cellular functions and regulatory roles in keratinocyte biology. These data serve as a resource for understanding PCIF1-mediated signaling pathways and protein networks in response to UVB stress.
DOI: 10.15468/dl.7sf7gb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "Geometry POLYGON ((-119.5743 35.35167, -119.5742 35.35202, -119.574 35.35238, -119.5739 35.35275, -119.5738 35.35313, -119.5737 35.35351, -119.5736 35.35389, -119.5736 35.35427, -119.5736 35.35465, -119.5736 35.35504, -119.5736 35.35542, -119.5737 35.3558, -119.5738 35.35618, -119.5739 35.35655, -119.574 35.35692, -119.5742 35.35728, -119.5744 35.35764, -119.5746 35.35798, -119.5748 35.35832, -119.5751 35.35864, -119.5753 35.35896, -119.5756 35.35926, -119.5759 35.35955, -119.5763 35.35983, -119.5766 35.36009, -119.577 35.36034, -119.5773 35.36057, -119.5777 35.36079, -119.5781 35.36099, -119.5786 35.36117, -119.579 35.36133, -119.5794 35.36148, -119.5799 35.3616, -119.5803 35.36171, -119.5808 35.36179, -119.5812 35.36186, -119.5817 35.36191, -119.5836 35.36205, -119.584 35.36208, -119.5845 35.36209, -119.5849 35.36208, -119.5854 35.36204, -119.5859 35.36199, -119.5863 35.36192, -119.5868 35.36183, -119.5872 35.36172, -119.5877 35.3616, -119.5881 35.36145, -119.5885 35.36129, -119.5889 35.36111, -119.5893 35.36091, -119.5897 35.3607, -119.5901 35.36047, -119.5904 35.36022, -119.5908 35.35996, -119.5911 35.35969, -119.5914 35.3594, -119.5919 35.35891, -119.5921 35.35862, -119.5924 35.35831, -119.5927 35.35798, -119.5929 35.35765, -119.5931 35.35731, -119.5933 35.35697, -119.5934 35.35661, -119.5936 35.35625, -119.594 35.35483, -119.5942 35.35446, -119.5943 35.35408, -119.5943 35.3537, -119.5944 35.35332, -119.5944 35.35293, -119.5944 35.35255, -119.5943 35.35216, -119.5943 35.35178, -119.5942 35.3514, -119.5941 35.35103, -119.594 35.35066, -119.5938 35.35029, -119.5936 35.34993, -119.5934 35.34959, -119.5932 35.34925, -119.593 35.34892, -119.5927 35.3486, -119.5924 35.34829, -119.5921 35.34799, -119.5918 35.34771, -119.5915 35.34745, -119.5911 35.34719, -119.5907 35.34696, -119.5903 35.34674, -119.5899 35.34653, -119.5895 35.34635, -119.5891 35.34618, -119.5887 35.34603, -119.5882 35.3459, -119.5878 35.34579, -119.5873 35.3457, -119.5869 35.34562, -119.5852 35.34541, -119.5848 35.34536, -119.5843 35.34532, -119.5838 35.34531, -119.5834 35.34532, -119.5829 35.34535, -119.5824 35.3454, -119.5819 35.34547, -119.5815 35.34556, -119.581 35.34567, -119.5806 35.3458, -119.5801 35.34594, -119.5797 35.34611, -119.5793 35.34629, -119.5789 35.3465, -119.5785 35.34671, -119.5781 35.34695, -119.5778 35.3472, -119.5774 35.34747, -119.5771 35.34775, -119.5768 35.34804, -119.5765 35.34835, -119.5762 35.34867, -119.576 35.349, -119.5758 35.34934, -119.5745 35.35132, -119.5743 35.35167))",
 "Year is greater than or equal to 2001",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021205-251120083545085/datasets/export for details.
DOI: 10.15468/dl.gmurwc
title: Occurrence Download

description: A dataset containing 719258 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Passeriformes",
 "Year 2022-2024"
 ]
}

 The dataset includes 719258 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021187-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uh4qwv
title: Occurrence Download

description: A dataset containing 32771 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "GadmGid is USA.44_1",
 "TaxonKey is Cyanocitta cristata",
 "Year 2014-2014"
 ]
}

 The dataset includes 32771 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021206-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15401944
title: MD simulation and AFM image files

description: Dataset MD contains MD simulations of the interaction of different combinations of monovalent (Na+, K+) and divalent (Mg2+, Ca2+, Sr2+) cations with the Drew-Dickerson B-DNA dodecamer. The simulations were conducted using the GROMACS 4.7.0 program package.

Dataset AFM contains in-situ AFM images of DNA origami triangles (6 nM) adsorbed on mica surfaces in the presence of different combinations of monovalent (Na+, K+, 90 mM) and divalent (Mg2+, Ca2+, Sr2+, 10 mM) cations.Imaging was performed using a JPK Nanowizard ULTRA Speed with USC F0.3-k0.3 cantilevers. Images were  were recorded at 15 min intervals at a line rate of 30 Hz and a resolution of 512 x 512 px.
DOI: 10.5281/zenodo.16948456
title: MD simulation and AFM image files

description: Dataset MD contains MD simulations of the interaction of different combinations of monovalent (Na+, K+) and divalent (Mg2+, Ca2+, Sr2+) cations with the Drew-Dickerson B-DNA dodecamer. The simulations were conducted using the GROMACS 4.7.0 program package.

Dataset AFM contains in-situ AFM images of DNA origami triangles (6 nM) adsorbed on mica surfaces in the presence of different combinations of monovalent (Na+, K+, 90 mM) and divalent (Mg2+, Ca2+, Sr2+, 10 mM) cations.Imaging was performed using a JPK Nanowizard ULTRA Speed with USC F0.3-k0.3 cantilevers. Images were  were recorded at 15 min intervals at a line rate of 30 Hz and a resolution of 512 x 512 px.
DOI: 10.15468/dl.jvdzr8
title: Occurrence Download

description: A dataset containing 14178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United States of America, Mexico)",
 "OccurrenceStatus is Present",
 "TaxonKey is Bouteloua gracilis"
 ]
}

 The dataset includes 14178 records from 265 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021207-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8sf9sc
title: Occurrence Download

description: A dataset containing 9855 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mexico, United States of America)",
 "OccurrenceStatus is Present",
 "TaxonKey is Melinis repens"
 ]
}

 The dataset includes 9855 records from 250 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021212-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6uy6yk
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Banksia burdettii Baker fil."
 ]
}

 The dataset includes 133 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0226617-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t64hbj
title: Occurrence Download

description: A dataset containing 241 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Artedidraco shackletoni Waite, 1911"
 ]
}

 The dataset includes 241 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029337-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wfddsh
title: Occurrence Download

description: A dataset containing 425 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Paspalum guenoarum Arechav.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 425 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053980-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rfxg32
title: Occurrence Download

description: A dataset containing 192 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllodactylus bordai Taylor, 1942"
 ]
}

 The dataset includes 192 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039059-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3dugca
title: Occurrence Download

description: A dataset containing 11062 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euonymus verrucosus Scop."
 ]
}

 The dataset includes 11062 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076072-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ufp6qn
title: Occurrence Download

description: A dataset containing 292 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Artedidraco skottsbergi Lönnberg, 1905"
 ]
}

 The dataset includes 292 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029338-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2hzg4z
title: Occurrence Download

description: A dataset containing 272 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ditrichum plumbicola Crundw."
 ]
}

 The dataset includes 272 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0226639-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bg9r63
title: Occurrence Download

description: A dataset containing 228976 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "Year 2020-2020"
 ]
}

 The dataset includes 228976 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034814-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tskqrv
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Blepharispermum xerothamnum Mattf."
 ]
}

 The dataset includes 21 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023392-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2effev
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "TaxonKey is Syrphus rectus Osten Sacken, 1875",
 "Year 1980-2018"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0226642-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2vfbku
title: Occurrence Download

description: A dataset containing 377 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pterocarya macroptera Batalin"
 ]
}

 The dataset includes 377 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294499-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1ls6n3
title: Occurrence Download

description: A dataset containing 2569 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Abies balsamea (L.) Mill.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2569 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006007-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7pg3mg
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Geograpsus lividus (H.Milne Edwards, 1837)"
 ]
}

 The dataset includes 170 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011309-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jchb5r
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Calanthe puberula Lindl.",
 "Year 1981-2019"
 ]
}

 The dataset includes 34 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294525-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.