cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8286254.v1
title: Activity of hydrothermal fluid at the bottom of a lake and its influence on the development of high-quality source rocks: Triassic Yanchang Formation, southern Ordos Basin, China

description: Evidence for hydrothermal activity, such as siliceous rocks, iron dolomite layer deposits, and hydrothermal mineral combinations of ilmenite + pyrite + anhydrite, has been found in the high-quality source rocks from the Chang 7 layer in the Triassic Yanchang Formation from the southern margin of the Ordos Basin, China. In this paper, elemental geochemical analysis is carried out on a large number of samples collected from an outcrop geological section and drill core from the Chang 7 layer. We use elemental ratios to study the hydrothermal activity; the Al/(Al + Fe + Mn) ratio reflects the paleoproductivity, and the P/Al and P/Ti ratios and total S contents reflect the redox environment. The relationships between the hydrothermal activity and paleoproductivity, redox conditions and organic matter content are discussed. The correlation coefficients between the hydrothermal index Al/(Al + Fe + Mn) and the (Fe + Mn)/Ti ratio and total organic carbon are as high as –0.88 and 0.87, respectively, demonstrating a close relationship between hydrothermal activity and source-rock deposition. The correlation coefficients between the Al/(Al + Fe + Mn) ratio and the P/Al and P/Ti ratios, and total S contents are –0.81, –0.80, and –0.89, respectively, supporting this relationship. Hydrothermal activity can promote productivity at the lake surface and the development of a bottom-water anoxic environment. The paleoproductivity level of the Chang 7 sedimentary period is relatively high and represents an oxygen-poor anaerobic environment. The hydrothermal activity in the southern margin of the basin is strong, whereas the activity in the north is gradually weakened. Studies have shown that the hydrothermal activity at the bottom of the lake plays an important role in promoting the large-scale development of the Chang 7 high-quality source rocks. The organic matter abundance in samples with hydrothermal alteration are greater than in samples elsewhere.
DOI: 10.6084/m9.figshare.8286233.v2
title: Age and composition of dykes emplaced before and during the opening of the Tasman Sea—source implications

description: Dykes are common in the wave-cut platforms along the coast from Newcastle to Sydney. According to some authors, they may be related to the opening of the Tasman Sea that commenced <i>ca</i> 84 Ma ago. However, there are few detailed radiogenic dating and geochemical studies to evaluate this. We attempt to resolve this by K–Ar dating of plagioclase in and geochemical studies of, basaltic dykes intruding Permo-Triassic sequences on the wave-cut platforms and Carboniferous and Permo-Triassic sequences inland. The plagioclase separated from the dykes give K–Ar ages ranging from 266 to 53 Ma with the majority older than 84 Ma indicating that most dykes were emplaced before the Tasman Seafloor formation. The dykes are generally mildly alkaline, high-Ti basalts; fewer are tholeiitic and calc-alkaline, low-Ti basalts. Strongly light rare earth element (LREE)-enriched patterns typify the former and flat, LREE-depleted or slightly to moderately enriched LREE patterns, the latter. High-Ti basalts have ocean-island-basalt-like and low-Ti basalts, calc-alkaline or mid-ocean ridge basalt (MORB)-like patterns. Most high-Ti and some low-Ti basalts show plume-like characteristics, others N-type MORB and arc-like characteristics. Dykes intruding the Carboniferous sequences show a distinct contamination signature that could be crustal or due to subduction-related metasomatism of the subcontinental lithospheric mantle. The sources of the basaltic magmas vary substantially and in places changes with time. All alkali basalts are derived from enriched asthenospheric sources at varying depths (90–147 km) and most tholeiitic, low-Ti basalts have been extracted from asthenospheric and depleted asthenospheric–lithospheric sources indicating substantial compositional heterogeneity of the mantle. Further, Nd model ages varying from Neoproterozoic (940–580 Ma) to Paleozoic (460–370 Ma) suggest variation in the age of mantle sources for the basalts.
DOI: 10.6084/m9.figshare.8286095
title: Fuller Air Exposure Data.csv

description: This file contains the lactate, glucose, hematocrit, release behavior score, and nictitating membrane reflex of blacktip sharks exposed to different treatments. Air temperature, water temperature, thermal gradient, dissolved oxygen were also recorded at the collection site along with the total length and sex of sharks.<br>
DOI: 10.6084/m9.figshare.8286233.v1
title: Age and composition of dykes emplaced before and during the opening of the Tasman Sea—source implications

description: Dykes are common in the wave-cut platforms along the coast from Newcastle to Sydney. According to some authors, they may be related to the opening of the Tasman Sea that commenced <i>ca</i> 84 Ma ago. However, there are few detailed radiogenic dating and geochemical studies to evaluate this. We attempt to resolve this by K–Ar dating of plagioclase in and geochemical studies of, basaltic dykes intruding Permo-Triassic sequences on the wave-cut platforms and Carboniferous and Permo-Triassic sequences inland. The plagioclase separated from the dykes give K–Ar ages ranging from 266 to 53 Ma with the majority older than 84 Ma indicating that most dykes were emplaced before the Tasman Seafloor formation. The dykes are generally mildly alkaline, high-Ti basalts; fewer are tholeiitic and calc-alkaline, low-Ti basalts. Strongly light rare earth element (LREE)-enriched patterns typify the former and flat, LREE-depleted or slightly to moderately enriched LREE patterns, the latter. High-Ti basalts have ocean-island-basalt-like and low-Ti basalts, calc-alkaline or mid-ocean ridge basalt (MORB)-like patterns. Most high-Ti and some low-Ti basalts show plume-like characteristics, others N-type MORB and arc-like characteristics. Dykes intruding the Carboniferous sequences show a distinct contamination signature that could be crustal or due to subduction-related metasomatism of the subcontinental lithospheric mantle. The sources of the basaltic magmas vary substantially and in places changes with time. All alkali basalts are derived from enriched asthenospheric sources at varying depths (90–147 km) and most tholeiitic, low-Ti basalts have been extracted from asthenospheric and depleted asthenospheric–lithospheric sources indicating substantial compositional heterogeneity of the mantle. Further, Nd model ages varying from Neoproterozoic (940–580 Ma) to Paleozoic (460–370 Ma) suggest variation in the age of mantle sources for the basalts.
DOI: 10.6084/m9.figshare.8286095.v1
title: Fuller Air Exposure Data.csv

description: This file contains the lactate, glucose, hematocrit, release behavior score, and nictitating membrane reflex of blacktip sharks exposed to different treatments. Air temperature, water temperature, thermal gradient, dissolved oxygen were also recorded at the collection site along with the total length and sex of sharks.<br>
DOI: 10.6084/m9.figshare.8286035
title: CO-ARBitrator Rev2 COI TSV Table

description: COI records recovered from GenBank by CO-ARBitrator. See README for details.
DOI: 10.6084/m9.figshare.8286008
title: Table S2 from the manuscript "Emergence of an evolutionary innovation: Gene expression differences associated with the transition between oviparity and viviparity".

description: This repository contains Table S2 from the manuscript "Emergence of an evolutionary innovation: Gene expression differences associated with the transition between oviparity and viviparity". <br><br>Table S2: Annotation of the <i>Saiphos equalis</i> transcriptome based on best NCBI BLASTX and BLASTP (v2.7.1+) hits against the SwissProt database and <i>Anolis carolinensis</i> (AnoCar2.0), <i>Pogona vitticeps</i> (GCA_900067755), <i>Gallus gallus</i> (GRCg6a),<i> Mus musculus</i> (GRCm38.p6), and <i>Homo sapiens</i> (GRCh38.p12) reference proteomes. Any predicted signal peptides or transmembrane helices based on analysis with SignalP and TmHMM are indicated. Genes are also annotated with EggNOG Orthology terms, KEGG Orthology terms, and Gene Ontology terms (based on hits to both the SwissProt and Pfam databases).
DOI: 10.6084/m9.figshare.8286014
title: CO-ARBitrator Rev2 Amino Acid fasta

description: Amino Acid records recovered from GenBank by CO-ARBitrator algorithm. See README for details.
DOI: 10.6084/m9.figshare.8286005
title: CO-ARBitrator Rev2 Nucleotide Fasta

description: Fasta file containing COI nucleotide sequences recovered from GenBank by CO-ARBitrator algorithm. See README for details.
DOI: 10.6084/m9.figshare.8286008.v2
title: Table S2 from the manuscript "Emergence of an evolutionary innovation: Gene expression differences associated with the transition between oviparity and viviparity".

description: This repository contains Table S2 from the manuscript "Emergence of an evolutionary innovation: Gene expression differences associated with the transition between oviparity and viviparity". <br><br>Table S2: Annotation of the <i>Saiphos equalis</i> transcriptome based on best NCBI BLASTX and BLASTP (v2.7.1+) hits against the SwissProt database and <i>Anolis carolinensis</i> (AnoCar2.0), <i>Pogona vitticeps</i> (GCA_900067755), <i>Gallus gallus</i> (GRCg6a),<i> Mus musculus</i> (GRCm38.p6), and <i>Homo sapiens</i> (GRCh38.p12) reference proteomes. Any predicted signal peptides or transmembrane helices based on analysis with SignalP and TmHMM are indicated. Genes are also annotated with EggNOG Orthology terms, KEGG Orthology terms, and Gene Ontology terms (based on hits to both the SwissProt and Pfam databases).
DOI: 10.6084/m9.figshare.8286035.v1
title: CO-ARBitrator Rev2 COI TSV Table

description: COI records recovered from GenBank by CO-ARBitrator. See README for details.
DOI: 10.6084/m9.figshare.8286008.v1
title: Table S2 from the manuscript "Emergence of an evolutionary innovation: Gene expression differences associated with the transition between oviparity and viviparity".

description: This repository contains Table S2 from the manuscript "Emergence of an evolutionary innovation: Gene expression differences associated with the transition between oviparity and viviparity". <br><br>Table S2: Annotation of the <i>Saiphos equalis</i> transcriptome based on best NCBI BLASTX and BLASTP (v2.7.1+) hits against the SwissProt database and <i>Anolis carolinensis</i> (AnoCar2.0), <i>Pogona vitticeps</i> (GCA_900067755), <i>Gallus gallus</i> (GRCg6a),<i> Mus musculus</i> (GRCm38.p6), and <i>Homo sapiens</i> (GRCh38.p12) reference proteomes. Any predicted signal peptides or transmembrane helices based on analysis with SignalP and TmHMM are indicated. Genes are also annotated with EggNOG Orthology terms, KEGG Orthology terms, and Gene Ontology terms (based on hits to both the SwissProt and Pfam databases).
DOI: 10.6084/m9.figshare.8286014.v1
title: CO-ARBitrator Rev2 Amino Acid fasta

description: Amino Acid records recovered from GenBank by CO-ARBitrator algorithm. See README for details.
DOI: 10.6084/m9.figshare.8286014.v3
title: CO-ARBitrator Rev2 Amino Acid fasta

description: Amino Acid records recovered from GenBank by CO-ARBitrator algorithm. See README for details.
DOI: 10.6084/m9.figshare.8286035.v2
title: CO-ARBitrator Rev2 COI TSV Table

description: COI records recovered from GenBank by CO-ARBitrator. See README for details.
DOI: 10.6084/m9.figshare.8286005.v1
title: CO-ARBitrator Rev2 Nucleotide Fasta

description: Fasta file containing COI nucleotide sequences recovered from GenBank by CO-ARBitrator algorithm. See README for details.
DOI: 10.6084/m9.figshare.8286014.v2
title: CO-ARBitrator Rev2 Amino Acid fasta

description: Amino Acid records recovered from GenBank by CO-ARBitrator algorithm. See README for details.
DOI: 10.6084/m9.figshare.8286035.v3
title: CO-ARBitrator Rev2 COI TSV Table

description: COI records recovered from GenBank by CO-ARBitrator. See README for details.
DOI: 10.6084/m9.figshare.8285993
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardelean et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardelean et al.
DOI: 10.6084/m9.figshare.8286005.v2
title: CO-ARBitrator Rev2 Nucleotide Fasta

description: Fasta file containing COI nucleotide sequences recovered from GenBank by CO-ARBitrator algorithm. See README for details.
DOI: 10.6084/m9.figshare.8286035.v5
title: CO-ARBitrator Rev2 COI TSV Table

description: COI records recovered from GenBank by CO-ARBitrator. See README for details.
DOI: 10.6084/m9.figshare.8286035.v4
title: CO-ARBitrator Rev2 COI TSV Table

description: COI records recovered from GenBank by CO-ARBitrator. See README for details.
DOI: 10.6084/m9.figshare.8286005.v3
title: CO-ARBitrator Rev2 Nucleotide Fasta

description: Fasta file containing COI nucleotide sequences recovered from GenBank by CO-ARBitrator algorithm. See README for details.
DOI: 10.6084/m9.figshare.8285993.v1
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.
DOI: 10.6084/m9.figshare.8286005.v4
title: CO-ARBitrator Rev2 Nucleotide Fasta

description: Fasta file containing COI nucleotide sequences recovered from GenBank by CO-ARBitrator algorithm. See README for details.
DOI: 10.6084/m9.figshare.8285993.v2
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.
DOI: 10.6084/m9.figshare.8285954
title: 5. Gridded OFP at 0.25 x 0.25 degree for 1990-2017

description: Gridded OFP at 0.25 x 0.25 degree for 1990, 1995, 2000, 2005, 2010, 2013-2017.
DOI: 10.6084/m9.figshare.8285993.v3
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.
DOI: 10.6084/m9.figshare.8285939
title: 2. Emission trends by species and chemical groups for 1990-2017

description: Emission trends by species and chemical groups for 1990-2017
DOI: 10.6084/m9.figshare.8285945
title: 3. Decomposed changes by chemical group and sector for emissions and OFP for 1990-2017

description: Decomposed changes by chemical group and sector for emissions and OFP for 1990-2017
DOI: 10.6084/m9.figshare.8285948
title: 4. Comparison of NMVOC emissions in China

description: Comparison of NMVOC emissions in China
DOI: 10.6084/m9.figshare.8285945.v1
title: 3. Decomposed changes by chemical group and sector for emissions and OFP for 1990-2017

description: Decomposed changes by chemical group and sector for emissions and OFP for 1990-2017
DOI: 10.6084/m9.figshare.8285948.v1
title: 4. Comparison of NMVOC emissions in China

description: Comparison of NMVOC emissions in China
DOI: 10.6084/m9.figshare.8285993.v4
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.
DOI: 10.17608/k6.auckland.8285909
title: L44 mouse bodyweight, blood glucose and serum hormone data

description: Blood glucose, body weight and serum hormone characterisation of the L44 mouse, a model of obesity and type 2 diabetes, over 400 days. L44 mice overexpress a nonamyloidogenic and noncytotoxic variant of human amylin that contains three proline substitutions at residues 25, 28 and 29 ([<sup>25, 28, 29</sup>triprolyl]human amylin or tripro-hA). This allows for the study of the chronic effects of amylin overexpression. L44 mice were studied for a period of 400 days, with weekly blood glucose and body weight measurements. Three genotypes were examined; hemizygous (HEM), homozygous (HOM) and nontransgenic littermates (NON). Tissue and serum sample collection occurred at three time points: <b>T1:</b> 100 days <b>T2:</b> diabetes onset (3 consecutive weekly measurements of blood glucose &gt; 11 mM) <b>T3: </b>400 days Here, we provide weekly blood glucose and body weight measurements, and the circulating serum hormone levels of amylin, insulin and leptin at each time point. Abbreviations: BG = blood glucose (mM) BW = body weight (g) Sample IDs with a / are pooled serum samples from two individuals, e.g., T1 HEM 1/2 is a pooled sample with an equal volume of serum from T1 HEM 1 and T1 HEM 2.
DOI: 10.6084/m9.figshare.8285993.v5
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.
DOI: 10.17608/k6.auckland.8285909.v1
title: L44 mouse bodyweight, blood glucose and serum hormone data

description: Blood glucose, body weight and serum hormone characterisation of the L44 mouse, a model of obesity and type 2 diabetes, over 400 days. L44 mice overexpress a nonamyloidogenic and noncytotoxic variant of human amylin that contains three proline substitutions at residues 25, 28 and 29 ([<sup>25, 28, 29</sup>triprolyl]human amylin or tripro-hA). This allows for the study of the chronic effects of amylin overexpression. L44 mice were studied for a period of 400 days, with weekly blood glucose and body weight measurements. Three genotypes were examined; hemizygous (HEM), homozygous (HOM) and nontransgenic littermates (NON). Tissue and serum sample collection occurred at three time points: <b>T1:</b> 100 days <b>T2:</b> diabetes onset (3 consecutive weekly measurements of blood glucose &gt; 11 mM) <b>T3: </b>400 days Here, we provide weekly blood glucose and body weight measurements, and the circulating serum hormone levels of amylin, insulin and leptin at each time point. Abbreviations: BG = blood glucose (mM) BW = body weight (g) Sample IDs with a / are pooled serum samples from two individuals, e.g., T1 HEM 1/2 is a pooled sample with an equal volume of serum from T1 HEM 1 and T1 HEM 2.
DOI: 10.6084/m9.figshare.8285993.v6
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.
DOI: 10.17608/k6.auckland.8285909.v3
title: L44 mouse bodyweight, blood glucose and serum hormone data

description: Blood glucose, body weight and serum hormone characterisation of the L44 mouse, a model of obesity and type 2 diabetes, over 400 days. L44 mice overexpress a nonamyloidogenic and noncytotoxic variant of human amylin that contains three proline substitutions at residues 25, 28 and 29 ([<sup>25, 28, 29</sup>triprolyl]human amylin or tripro-hA). This allows for the study of the chronic effects of amylin overexpression. L44 mice were studied for a period of 400 days, with weekly blood glucose and body weight measurements. Three genotypes were examined; hemizygous (HEM), homozygous (HOM) and nontransgenic littermates (NON). Tissue and serum sample collection occurred at three time points: <b>T1:</b> 100 days <b>T2:</b> diabetes onset (3 consecutive weekly measurements of blood glucose &gt; 11 mM) <b>T3: </b>400 days Here, we provide weekly blood glucose and body weight measurements, and the circulating serum hormone levels of amylin, insulin and leptin at each time point. Abbreviations: BG = blood glucose (mM) BW = body weight (g) Sample IDs with a / are pooled serum samples from two individuals, e.g., T1 HEM 1/2 is a pooled sample with an equal volume of serum from T1 HEM 1 and T1 HEM 2.
DOI: 10.17608/k6.auckland.8285909.v2
title: L44 mouse bodyweight, blood glucose and serum hormone data

description: Blood glucose, body weight and serum hormone characterisation of the L44 mouse, a model of obesity and type 2 diabetes, over 400 days. L44 mice overexpress a nonamyloidogenic and noncytotoxic variant of human amylin that contains three proline substitutions at residues 25, 28 and 29 ([<sup>25, 28, 29</sup>triprolyl]human amylin or tripro-hA). This allows for the study of the chronic effects of amylin overexpression. L44 mice were studied for a period of 400 days, with weekly blood glucose and body weight measurements. Three genotypes were examined; hemizygous (HEM), homozygous (HOM) and nontransgenic littermates (NON). Tissue and serum sample collection occurred at three time points: <b>T1:</b> 100 days <b>T2:</b> diabetes onset (3 consecutive weekly measurements of blood glucose &gt; 11 mM) <b>T3: </b>400 days Here, we provide weekly blood glucose and body weight measurements, and the circulating serum hormone levels of amylin, insulin and leptin at each time point. Abbreviations: BG = blood glucose (mM) BW = body weight (g) Sample IDs with a / are pooled serum samples from two individuals, e.g., T1 HEM 1/2 is a pooled sample with an equal volume of serum from T1 HEM 1 and T1 HEM 2.
DOI: 10.6084/m9.figshare.8285993.v7
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.
DOI: 10.6084/m9.figshare.8285993.v8
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardeleian et al.
DOI: 10.6084/m9.figshare.8285993.v9
title: Data for "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardelean et al.

description: Data files and Data analysis results for the manuscript "Wide-field time-gated SPAD imager for phasor-based FLIM applications" by Ulku, Ardelean et al.