cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16830748.v1
title: Supplementary Material for: Cortical Hyper-Connectivity in a Stroke Patient with Rotated Drawing

description: In the present case report, we investigated the cortical networks of a patient (DDA) affected by right parietal stroke who showed a constructional phenomenon, in which when coping and recalling from memory a complex figure, the model was reproduced rotated of 90° along the vertical axis. Previous studies suggested that rotation on copy is associated with visuospatial impairments and abnormalities in parietal cortex, whereas rotation on recall might be related to executive deficits and dysfunction of frontal regions. Here, we computed the DDA’s resting-state functional connectivity (FC) derived from cortical regions of the dorsal attention (DAN) and the frontal portion of the executive-control network (fECN), which are involved in the control of visuospatial attention and multiple executive functions, respectively. We observed that, as compared to a control group of right stroke patients without drawing rotation, DDA exhibited selective increased FC of the DAN and fECN, but not of task-irrelevant language network, within the undamaged hemisphere. These patterns might reflect a pathological communication in such networks leading to impaired attentional and executive operations required to reproduce the model in the correct orientation. Notably, such enhancement of FC was not detected in a patient with a comparable neuropsychological profile as DDA, yet without rotated drawing, suggesting that network-specific modulations in DDA might be ascribed to the constructional phenomenon of rotated drawing.
DOI: 10.6084/m9.figshare.23205650.v1
title: Data from "Molecular transport enhancement in pure metallic carbon nanotube porins"

description: Data from "Molecular transport enhancement in pure metallic carbon nanotube porins".
DOI: 10.6084/m9.figshare.29127947.v1
title: Spatio-Temporal Geographic Networks for Value Co-Creation and Technology Transfer in china with Patent Data

description: Spatio-Temporal Geographic Networks for Value Co-Creation and Technology Transfer in china with Patent Data
DOI: 10.6084/m9.figshare.5124088.v1
title: Supplementary Material for: The Leipzig Thyrotropin Receptor Mutation Database: Update 2012

description: Medicine
DOI: 10.17632/4j8npwgvmv
title: Dataset on the spatial distribution of groundwater quality for pH, EC, TH, Ca2+, Mg2+, HCO3- . F-, and NO3- and in Dodoma, Singida, and Tabora regions located in central Tanzania

description: A total of 64 water samples were collected in all. 22 samples from Dodoma and Singida and 20 samples from Tabora. All samples were collected from boreholes that are publicly accessible. Data collection covered a total distance of 1,344 km, which was divided into east-west along B129, B6, and B143 roads and north-south along A104, B141, and B6 roads. GPS coordinates of sample collection sites were recorded using a Garmin Nuvi 255w GPS receiver. All samples were collected within a three-day period in the month of August of 2020. pH, temperature, and EC were measured on site. The levels of TH, HCO3-, NO3-, and F- were determined within 24 hours of sample collection. The samples were kept in a 1 L polythene plastic bottle washed with distilled and sample. This dataset shows the parameters of pH, EC, TH, Ca2+, Mg2+, HCO3- NO3-, F-,  and NO3-
DOI: 10.17632/fxwbhp6knr
title: Data for: DosR proteins of Mycobacterium tuberculosis upregulate effector T cells and down regulate T regulatory cells in TB patients and their healthy contacts

description: Fig S1. Cloning and Expression of recombinant proteins Rv2627 and Rv2628 a) Positive plasmid PCR of gene Rv2627 (L1) with product size 1242bp and gene Rv2628 (L2) with product size 363bp and M- Marker. b) SDS PAGE of purified Rv2627 and Rv2628 protein in native condition. M-Marker and L1- Rv2627 and L2- Rv2628 purified protein. The molecular weight of Rv2627 was 46.5 kDa and Rv2628 was 13.1 kDa. c) Western blot of purified Rv2627 and Rv2628. M-Marker and L1- Rv2627 and L2- Rv2628 purified protein. Fig S2. Gating strategies used for acquiring and analysis of CD3+ cells using labeled un-stimulated and stimulated cells and their FMO controls a) CD4+ IFN-γ+, b) CD4+CD45RA+, c) CD4+CD45RO+, d) CD8+IFN-γ+, e) CD8+CD45RA+, f) CD8+ CD45RO+ and g) Treg (CD4+CD25+FoxP3+). Fig S3. Basal percentage of different T cell markers in the three sample population of Normal (n=20), Contacts (n=20) and PTB patients (n=20). The normal individuals had highest percentage of CD4+CD45RA+, CD4+CD45RO+, CD8+CD45RA+, CD8+CD45RO+ cells as compared to that of contacts and patients whereas the PTB patients had highest percentage of Treg cells. Statistical differences between samples were calculated by the Mann-Whitney U test for unpaired samples. Values were shown as mean ± SD, *P &lt; 0.05, **P &lt; 0.01, ***P &lt; 0.001 and ****P &lt; 0.0001. Fig S4. Basal Cytokine production profile in PBMC of three sample population of Normal (n=15), Contacts (n=15) and PTB patients (n=15). The contacts had higher basal level of cytokines like IFN-γ and IL-2 whereas PTB patients had higher basal levels of cytokines like IL-4 and TGF-. Statistical differences between samples were calculated by the Mann-Whitney U test for unpaired samples. Values were shown as mean ± SD, *P &lt; 0.05, **P &lt; 0.01 and ***P &lt; 0.001. Fig S5. Rv2627 and Rv2628 skew the immune response towards Th1 in both contacts and patients by increasing the IFN-γ production In contacts, IFN-γ/IL-4 ratio increased significantly only for Rv2628, whereas in PTB samples the ratio increased for both the proteins. Statistical differences between unstimulated and stimulated samples were calculated by the Wilcoxon rank sum test for paired samples. Values were shown as mean ± SD, *P &lt; 0.05.
DOI: 10.17632/y747bdb42h
title: Time course of TEPs scalp topography

description: Animation showing the time course of scalp topographies of electroencephalographic potentials evoked by transcranial magnetic stimulation (TEPs) for different cortical targets, located within Brodmann's areas BA6, BA4, BA7 and BA19, of the left hemisphere.
DOI: 10.6084/m9.figshare.15167907.v5
title: Legal implications of Prenatal Diagnosis

description: Statutory provisions on abortion law in Malaysia, UK and Singapore; cases on wrongful birth and wrongful life in the UK and Singapore
DOI: 10.6084/m9.figshare.21581337.v1
title: Data from St. Nicholas Church for tables, graphs, means, medians, and standard deviations

description: Datasets of the data from St. Nicholas Church based of the froms, also available. All the data used for various tables, graphs, means, medians, and standard deviations for my thesis can be found here.
DOI: 10.6084/m9.figshare.26988055.v1
title: Additional file 2 of Tailored therapeutic decision of rheumatoid arthritis using proteomic strategies: how to start and when to stop?

description: Additional file 2. An excel file including Table S1. Search strategy. Table S2. Studies associated with autoantibodies (References of Fig. 2). Table S3. Studies associated with serum proteins other than autoantibodies (References of Fig. 3b and Fig. S1). Table S4. References of Fig. 4. Table S5. Serum proteins and their full names.
DOI: 10.6084/m9.figshare.28980059.v1
title: Supplementary Material for: Clinical and Experimental Insights into the Role of NETosis in IgA Nephropathy Pathogenesis

description: Neutrophil extracellular traps (NETs) contribute to inflammation and are implicated in autoimmune diseases; however, their role in IgA nephropathy (IgAN) remains unclear. This study aimed to investigate the involvement of NETosis in IgAN and its impact on renal injury and mesangial cell function, utilizing patient samples, mouse models, and in vitro assays. RNA sequencing was performed on peripheral blood mononuclear cells (PBMCs) from IgAN patients to identify differentially expressed genes (DEGs) and NETosis-related pathways. An IgAN mouse model was established using bovine serum albumin, carbon tetrachloride, and lipopolysaccharide. Mice were treated with the PAD4 inhibitor GSK484 to evaluate the effects of NETosis inhibition. In vitro assays assessed the impact of NETosis on mesangial cells. RNA sequencing identified 905 DEGs in IgAN patients, with significant enrichment in neutrophil and NETosis pathways. Serum levels of NETosis markers—citrullinated histone H3 (CitH3), myeloperoxidase (MPO), and neutrophil elastase (NE)—were elevated in IgAN patients, with CitH3 levels correlating with Gd-IgA1. Inhibiting NETosis with GSK484 reduced CitH3 levels in IgAN mice and improved clinical outcomes, including decreased proteinuria and increased serum albumin. Histological analysis revealed reduced mesangial proliferation. In vitro, NETosis enhanced tumor necrosis factor-α (TNF-α) release from mesangial cells, an effect that was mitigated by GSK484. RNA-seq analysis of kidneys from GSK484-treated IgAN mice also revealed significant alterations in the PPAR signaling pathway. Additionally, TNF-α treatment of mesangial cells resulted in reduced PPARα expression, suggesting that NETosis may modulate this pathway through the release of TNF-α by mesangial cells. Our findings demonstrate that NETosis is upregulated in IgAN and plays a key role in its pathogenesis by promoting inflammatory cytokine release. Inhibition of NETosis improves both clinical and pathological outcomes, highlighting its potential as a therapeutic approach for managing IgAN.
DOI: 10.6084/m9.figshare.9585410.v4
title: Data for "Characterization of the Airflow within an Average Geometry of the Healthy Human Nasal Cavity"

description: This repository contains the data described in the manuscript "Characterization of the Airflow within an Average Geometry of the Healthy Human Nasal Cavity?" published in Nature Scientific Reports (doi: will be added when available). An extensive description of the published data will be given in the readme.txt.<br>- Average geometry of the healthy nasal cavity: The average geometry of the healthy nasal cavity generated using the statistical shape model described in the manuscript is provided in two file formats. An .stl-file with ASCII encoding and a .surf-file in ASCII encoding. The formatting of the latter file is specified in the readme file.<br>- Individual wall-bound distributions: All 25 patient-specific distributions of the wall shear stress and static pressure that were calculated during inspiration and expiraton respectively are made available via the individualDistributions.zip archive. All individual files are written in as ASCII files. More details regarding the formatting of those files is given in the readme file.<br>- Average Distributions: The averages of the individual distributions are made available via the averageDistributions.zip archive.<br>- SSM Distributions: The distributions of wall shear stresses and static pressure calculated for the average geometry during inspiration and expiration are made available via the SSMDistributions.zip archive.<br>- Integral measures: A table containing all integral measures calculated and reported within the manuscript can be found in the Excel file "integralMeasures_healthySubjects.xlsx".<br>- MATLAB Files for Data Processing: MATLAB functions for reading the surface and data files are made available via the MATLAB_readAMIRA.zip archive.<br>- data that might be added later: We are currently discussing whether we are allowed to publish the patient-specific geometries. If we get the required permissions, this data will also be added. <br><br>If any additional data is required or if you have questions regarding the data, don't hestitate to ask.<br><br><br>
DOI: 10.17632/8v52zfnxnm
title: Supplementary Data - Development of prediction equations for immunoglobulin A, G, and M concentrations in mature milk from Holstein cows using milk infrared spectral data

description: This study evaluates the potential of Fourier-transform infrared spectral data of 1,633 milk samples from Holstein cows to develop a prediction equation for the quantification of immunoglobulin (IgA, IgG, and IgM) concentrations in mature milk. The study also assesses the practical feasibility of the predicted immunoglobulin concentrations. This is the supplementary data associated with the research paper "Development of prediction equations for immunoglobulin A, G, and M concentrations in mature milk from Holstein cows using milk infrared spectral data".
DOI: 10.17632/yvtfcr52x6
title: LCH and malignancy association

description: The data include  cases  of the association between Langerhans cell Histiocytosis and another malignancy which may have occurred before, concurrently or after the LCH diagnosis both during childhood or adulthood.  Details describing the two entities are derived mostly from the published manuscripts or presentations at medical meetings. Details on 270 cases of LCH with another malignancy (AM) are shown in “LCH_Malignancy_raw_data.xlsx”. Detailed explanation of each column in the file, is reported in “LCH_Malignancy_Variables_list.pdf”.
DOI: 10.6084/m9.figshare.12164250.v1
title: Rumen MAG Fasta Files

description: Fasta files associated with the rumen metagenome-assembled genomes described in the manuscript "Insights into rumen microbial biosynthetic gene cluster diversity through genome-resolved metagenomics" by Anderson et al. <br>
DOI: 10.6084/m9.figshare.1281141.v1
title: Global funders who require data archiving as a condition of grants

description: Open access and open data are becoming more prominent on the global research agenda. Funders are increasingly requiring grantees to deposit their raw research data in appropriate public archives or stores in order to facilitate the validation of results and further work by other researchers. While the rise of open access has fundamentally changed the academic publishing landscape, the policies around data are reigniting the conversation around what universities can and should be doing to protect the assets generated at their institution. The main difference between an open access and open data policy is that there is not already a precedent or status quo of how academia deals with the dissemination of research that is not in the form of a traditional ‘paper’ publication. As governments and funders of research see the benefit of open content, the creation of recommendations, mandates and enforcement of mandates are coming thick and fast.
DOI: 10.6084/m9.figshare.26030524.v2
title: The Microflora Danica 16S rRNA gene reference database v1.0

description: The Microflora Danica and Microflora Global 16S rRNA gene reference databases in SINTAX, QIIME, and DADA2 format
DOI: 10.6084/m9.figshare.27717792.v1
title: Raw data.xlsx

description: This dataset contains the experimental data used in the study titled "Smart-monitoring capabilities of CFRP strips in civil structures based on width-to-length ratio optimization." The data focuses on the performance of Carbon Fiber Reinforced Polymer (CFRP) strips used for structural health monitoring (SHM) in civil engineering applications. The study investigates the impact of different width-to-length ratios of CFRP strips on their smart-monitoring capabilities, specifically their ability to detect and respond to structural deformations and damages.The dataset includes raw experimental results from various tests, such as strain measurements, resistance changes, and monitoring of structural responses under different loading conditions. These data are crucial for understanding how the geometry of CFRP strips influences their performance in detecting damage, enabling better optimization strategies for their use in SHM systems.The dataset is presented based on the experimental curves in the paper, with each sheet in the Excel file containing the data for one experimental curve.
DOI: 10.6084/m9.figshare.29078819.v1
title: Exploring Health Security Trends in Low-Income Countries_Supplementary Document.

description: This resource provides the datasets generated and analyzed for the paper titled <b>"Exploring Health Security Trends in Low-Income Countries Using a Hybrid D-CRITIC-CoCoSo and K-Means Approach."</b> It includes all the necessary data to reproduce the findings presented in this article.
DOI: 10.6084/m9.figshare.12055911.v2
title: Kone_OR_Data.zip

description: This is a master folder containing all relevant data to Kone et al. 2020.
DOI: 10.6084/m9.figshare.19402565.v1
title: Supplementary Material for: Drug Testing for Chronic Kidney Disease and Diabetes in Animals versus Humans: A Comparative Analysis of Study Designs and Reporting Qualities

description: <b><i>Introduction:</i></b> Diabetes is a highly prevalent accelerator or even cause of chronic kidney disease imposing a large unmet medical need at the global scale. Massive research activities continue to be in search of a cure but the yield of the classical bench-to-bedside research approach has been low. We speculated that a significant mismatch in design and quality of animal and clinical studies in this domain is a hurdle for translation. <b><i>Methods:</i></b> We performed a meta-analysis of matched pairs of animal and human studies that tested the efficacy of distinct drug interventions for diabetic kidney disease (DKD). We reviewed study designs and reporting quality of such studies over the last decade according to the standards listed in the CONSORT and ARRIVE recommendations, respectively. <b><i>Results:</i></b> We noted a wide diversity in the study designs of animal studies in terms of diabetes induction. Major mismatches with the respective human studies referred to age and sex distribution, comorbidities, stage of the kidney disease, and selection of primary endpoints. Usually, treatment was initiated before onset of kidney disease without any standard of care as a background therapy. The reporting quality of animal studies was poor for randomization procedures, blinding, sample size calculation for a prespecified primary endpoint or the safety analysis. Reporting quality of clinical studies had deficits in trial design-, recruitment-, allocation-, and outcome-related aspects. <b><i>Conclusion:</i></b> Bench-to-bedside translation in the domain of DKD suffers from major deficits in the design of experimental studies in view of the projected clinical trials as well as from significant deficits in the reporting quality in preclinical and clinical studies.
DOI: 10.6084/m9.figshare.24633639.v1
title: Intensification of Pacific Tropical Instability Waves over the recent three decades

description: Provide analysis codes (.m, MATLAB) and data (.mat) for each figure (5 main and 10 Extended Data figures) of a manuscript<sup>1</sup> entitled "Intensification of Pacific Tropical Instability Waves over the recent three decades".Wang,M., S.-P. Xie, H. Sasak, M. Nonaka, and Y. Du, 2024: Intensification of Pacific Tropical lnstability Waves over the recent three decades. Nature Clim. Change, accepted
DOI: 10.15468/dl.9eyvan
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calotropis gigantea",
 "Country is Venezuela (Bolivarian Republic of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 54 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025022-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pza6f4
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Liberia",
 "TaxonKey is Dalbergia hepperi Jongkind"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014022-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6141/tw-srda-c00385-1
title: Taiwan Internet Report 2022
DOI: 10.5281/zenodo.15569882
title: 증명 업적
DOI: 10.5281/zenodo.15569883
title: 증명 업적
DOI: 10.15468/dl.eu4jmn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melanolagus Kobyliansky, 1986",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((43.4313 -17.5054,43.9059 -19.9421,43.0686 -21.0649,42.7023 -21.9969,43.1619 -23.5254,43.213 -24.5373,43.6164 -25.1504,44.9648 -25.1504,44.9648 -16.1504,43.978 -16.1504,43.9239 -16.5407,43.4313 -17.5054))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014024-250525065834625/datasets/export for details.
DOI: 10.15468/dl.zud8rr
title: Occurrence Download

description: A dataset containing 3625 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Melinis minutiflora P.Beauv.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3625 records from 290 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014025-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wxgfqn
title: Occurrence Download

description: A dataset containing 206 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((1.46569 13.60323,-17.84663 11.38146,-19.38477 2.66528,-5.71234 -3.65822,7.10557 -4.68365,16.84718 -10.49444,32.74139 -16.13432,38.89399 2.32347,33.0832 8.81788,15.82175 14.62866,1.46569 13.60323))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dalbergia heudelotii Stapf"
 ]
}

 The dataset includes 206 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014026-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6141/tw-srda-d00206-1
title: Taiwan's Election and Democratization Study, 2016-2020(IV): Telephone and Mobile Phone Interview Survey of the Presidential Satisfaction-- The Thirtieth Wave (TEDS2019_PA12)

description: Election Studies
DOI: 10.6141/tw-srda-d00213-1
title: Taiwan's Election and Democratization Study, 2020-2024(I): Kaohsiung City Mayor By-Elections: Telephone Interview (TEDS2020M_BE-T)

description: Election Studies
DOI: 10.15468/dl.vfu8j5
title: Occurrence Download

description: A dataset containing 251 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Madagascar",
 "TaxonKey is Dalbergia hildebrandtii Vatke"
 ]
}

 The dataset includes 251 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014027-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjkpgx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melanolagus Kobyliansky, 1986",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((42.8012 -16.5547,42.4342 -16.6376,42.2188 -17.038,42.391 -17.4288,42.6657 -17.5533,43.0375 -17.4752,43.2579 -17.0968,43.0959 -16.69,42.8012 -16.5547))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014028-250525065834625/datasets/export for details.