cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.paj3xg
title: Occurrence Download

description: A dataset containing 13810 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oxidus Cook, 1911",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13810 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032567-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25000676.v2
title: Data from "Warmer temperatures facilitate evolutionary rescue from lethal environmental stress, driving a warm-to-cold bias in habitat colonization dynamics"

description: Higher temperatures can accelerate population evolutionary speed and hence speciation rate; and this is a major reason for the uneven distribution of biodiversity on Earth. Here we address the importance of temperature for short-term evolutionary dynamics. Specifically, the chance for populations to survive lethal environmental stresses through the occurrence and fixation of tolerant genotypes (namely evolutionary rescue) would be greater at warmer temperatures. With dispersal among habitats, the advantage in evolutionary rescue for warmer populations, together with population extinction caused by environmental stresses, may cause a bias in habitat colonization dynamics toward the warm-to-cold direction. Those hypotheses were supported by our experiments with a model microbial system. Our results show that warmer temperatures can promote the maintenance of biodiversity by facilitating rapid evolution, and help to understand how the “out of the tropics” pattern in species range shift or within-species gene flow may emerge.
DOI: 10.15468/dl.7sdagg
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Philautus nianeae Stuart, Phimmachak, Seateun & Sheridan, 2013"
 ]
}

 The dataset includes 22 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032568-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p69asj
title: Occurrence Download

description: A dataset containing 3162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is National Herbarium of Victoria (MEL) AVH data",
 "TaxonKey is Cyperus L."
 ]
}

 The dataset includes 3162 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032569-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tuzxc6
title: Occurrence Download

description: A dataset containing 13810 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oxidus Cook, 1911",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13810 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032570-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bynsva
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Philautus mjobergi Smith, 1925"
 ]
}

 The dataset includes 48 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032571-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48579/pro/aikoeb
title: Biomass and abundance of deep-pelagic fish from epi to bathypelagic trawls hauls in the Bay of Biscay, North-East Atlantic Ocean between 2021 and 2022

description: The dataset represents the biomass, abundance, and individual total length of 57 deep pelagic fish species collected by night pelagic trawling on the Bay of Biscay slope during the EVHOE scientific cruises in autumn 2021 and 2022 (https://doi.org/10.18142/8). Ten trawls were conducted at night between 25 m and 1400 m depth. The trawl had an average vertical mouth opening of 24m and a horizontal opening of 58m. The trawl did not have an opening-closing mechanism; therefore, some individuals might have been caught during the descent and ascent of the gear. The mesh size gradually decreased from 76mm to 44mm in the bag. The duration of the haul was approximately 1 hour at 4 knots.
DOI: 10.15468/dl.p333fx
title: Occurrence Download

description: A dataset containing 234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saguinus geoffroyi (Pucheran, 1845)",
 "Year 2023-2024",
 "Country is one of (Colombia, Panama)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 234 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032572-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a52k5f
title: Occurrence Download

description: A dataset containing 5539 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((144.97985 10.21513,139.9744 8.41514,140.07303 7.52747,142.73603 6.22063,146.9771 6.66446,148.20998 7.15761,149.24559 6.04802,150.40449 6.61514,151.83462 5.08638,153.36338 4.74118,154.54693 3.38502,158.12226 5.70282,162.06745 5.45625,162.9058 4.54392,163.79347 5.40693,160.588 6.76309,158.31952 7.47815,155.65652 8.26719,153.01817 9.08089,150.47846 9.3028,149.09764 9.17952,144.97985 10.21513))"
 ]
}

 The dataset includes 5539 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032575-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4shrqv
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saguinus leucopus (Günther, 1877)",
 "Year 2023-2024",
 "Country is one of (Colombia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 57 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032573-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvu3u9
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saguinus oedipus (Linnaeus, 1758)",
 "Year 2023-2024",
 "Country is one of (Colombia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 166 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032574-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48579/pro/d7mbhb
title: Individual carbon and nitrogen stable isotope compositions of sixteen deep pelagic fish species sampled in 2021 in the Bay of Biscay, Northeast Atlantic

description: The dataset contains individual carbon and nitrogen stable isotope compositions (δ13C and δ15N values, respectively) measured on 605 individuals belonging to 16 deep pelagic fish species (Arctozenus risso, Argyropelecus olfersii, Benthosema glaciale, Cyclothone spp., Lampanyctus crocodilus, Lampanyctus macdonaldi, Lestidiops sphyrenoides, Maulisia argipalla, Maurolicus muelleri, Melanostigma atlanticum, Myctophum punctatum, Notoscopelus bolini, Notoscopelus kroyeri, Searsia koefoedi, Serrivomer beanii, Xenodermichthys copei) collected on the Bay of Biscay slope, Northeast Atlantic. Fish sampling was carried out by pelagic trawl in canyons of the continental slope of the Bay of Biscay during EVHOE scientific cruises ("Evaluation Halieutique de l'Ouest de l'Europe"; https://doi.org/10.18142/8) in fall 2021. Trawls were conducted at night between 25 m and 1335 m depth at 7 stations. Each haul was conducted at a selected depth. Once the trawl reached the selected depth, it was towed horizontally (i.e. constant depth) at 4 knots for 1 hour. The average vertical mouth opening was about 24 m and the horizontal opening was about 58 m. Sub-samples for stable isotope analyses were taken from the white dorsal muscle. Small individuals of the same size sampled during the same trawling operation were grouped to have sufficient material for isotopic analyses. Analyses were performed using an isotope ratio mass spectrometer (Delta V Advantage with a Conflo IV interface, Thermo Scientific) coupled to an elemental analyser (Flash EA, 2000; Thermo Scientific). Results are presented in the usual δ notation relative to the deviation from international standards (PDB for δ13C values, atmospheric nitrogen for δ15N values), in parts per thousand (‰). Based on repeated measurements of USGS-61 and USGS-62, used as internal laboratory standards, the experimental analytical precision was &lt;0.15‰ for both δ13C and δ15N values. As lipids are highly depleted in 13C, variations in δ13C values can occur between species with very different lipid contents while their food may be similar, biasing the interpretation of δ13C values. To mitigate this bias, individuals with a high lipid content (i.e. C:N &gt; 5) were treated to remove lipids (see methodology Loutrage et al., 2024).
DOI: 10.15468/dl.wyem69
title: Occurrence Download

description: A dataset containing 1897 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is DD",
 "OccurrenceStatus is Present",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 1897 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032576-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7q2ejm
title: Occurrence Download

description: A dataset containing 599 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ailurus fulgens F.G.Cuvier, 1825"
 ]
}

 The dataset includes 599 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032577-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.22014787
title: How to embed ethics into laboratory research

description: Health-related innovation in biotechnology requires anticipating potential bioethical implications. In this article, we present a strategy to embed ethics in a group of early-stage researchers performing research in gene therapy and regenerative medicine in the laboratory phase. We conducted a series of focus group meetings with early-stage researchers who work in biotechnology laboratories. The objective was to reflect on the bioethical challenges of their own work and to promote the integration of research ethics with laboratory practice. The activity was assessed with questionnaires completed by the researchers before and after the meetings, and the analyses of the focus groups’ content. As a result of the focus group series, all participants changed their perspectives about ethical issues regarding their planned research, developed the ability to reflect and debate on research ethics and had increased awareness of ethical issues in their own research activities. Half of them made changes in their research work. The study provides a concrete strategy to embed ethics and to strengthen responsibility in laboratory research. It is a strategy that allows to perform ethics reflection “on site” and in “real time” and complements the classic strategy of ethics assessment of the research protocol before starting the research procedure.
DOI: 10.6084/m9.figshare.22014787.v1
title: How to embed ethics into laboratory research

description: Health-related innovation in biotechnology requires anticipating potential bioethical implications. In this article, we present a strategy to embed ethics in a group of early-stage researchers performing research in gene therapy and regenerative medicine in the laboratory phase. We conducted a series of focus group meetings with early-stage researchers who work in biotechnology laboratories. The objective was to reflect on the bioethical challenges of their own work and to promote the integration of research ethics with laboratory practice. The activity was assessed with questionnaires completed by the researchers before and after the meetings, and the analyses of the focus groups’ content. As a result of the focus group series, all participants changed their perspectives about ethical issues regarding their planned research, developed the ability to reflect and debate on research ethics and had increased awareness of ethical issues in their own research activities. Half of them made changes in their research work. The study provides a concrete strategy to embed ethics and to strengthen responsibility in laboratory research. It is a strategy that allows to perform ethics reflection “on site” and in “real time” and complements the classic strategy of ethics assessment of the research protocol before starting the research procedure.
DOI: 10.6084/m9.figshare.22060266.v1
title: Perception of organizational climate by university staff and students in medicine and humanities: A qualitative study

description: Organizational climate and culture are important for research organizations because they foster research integrity and responsible conduct of research, reduce questionable research practices, and improve job satisfaction. The aim of our study was to explore how employees and students perceive organizational climate and its consequences in the university setting. We conducted semi-structured interviews with senior students and employees (teaching and non-teaching staff) from two different university schools: School of Medicine and Faculty of Humanities and Social Sciences. Participants were asked questions regarding perceived climate, working environment, and the role of the institution. The data were analyzed using reflexive thematic analysis approach. Three themes were identified. The first theme addressed the difference in the perception and understanding of organizational climate. The second theme dealt with institutional issues emanating from organizational climate. The third theme described the behavior of stakeholders in the formation of organizational climate. Organizational climate is important concept in academic organizations as it influences both employees, particularly early career researchers, and students. Institutional leadership can strongly influence organizational climate, which can in turn affect job and job satisfaction. Due to the importance of personal morality on everyday decision-making, virtue-based research integrity training could be useful in improving academic institutions’ organizational climate.
DOI: 10.6084/m9.figshare.22060266
title: Perception of organizational climate by university staff and students in medicine and humanities: A qualitative study

description: Organizational climate and culture are important for research organizations because they foster research integrity and responsible conduct of research, reduce questionable research practices, and improve job satisfaction. The aim of our study was to explore how employees and students perceive organizational climate and its consequences in the university setting. We conducted semi-structured interviews with senior students and employees (teaching and non-teaching staff) from two different university schools: School of Medicine and Faculty of Humanities and Social Sciences. Participants were asked questions regarding perceived climate, working environment, and the role of the institution. The data were analyzed using reflexive thematic analysis approach. Three themes were identified. The first theme addressed the difference in the perception and understanding of organizational climate. The second theme dealt with institutional issues emanating from organizational climate. The third theme described the behavior of stakeholders in the formation of organizational climate. Organizational climate is important concept in academic organizations as it influences both employees, particularly early career researchers, and students. Institutional leadership can strongly influence organizational climate, which can in turn affect job and job satisfaction. Due to the importance of personal morality on everyday decision-making, virtue-based research integrity training could be useful in improving academic institutions’ organizational climate.
DOI: 10.15468/dl.jdrxmv
title: Occurrence Download

description: A dataset listing the 4532 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Plant"
 ]
}

 The dataset's 4532 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032546-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24779481
title: Human activities shape important geographic differences in fish mercury concentration levels

description: Fish consumption is a major route of human exposure to mercury (Hg), yet limited understanding of how anthropogenic activities drive geographic variations in fish Hg worldwide hinders effective Hg pollution management. Here we characterized global geographic variations in total Hg (THg) and methylmercury (MeHg), compared THg and MeHg levels between the US and China, and used a structural equation model (SEM) to link geographic variability of MeHg in fish to human activities. Despite previously reported higher Hg emissions in China, Chinese fish have lower THg and MeHg than the US due to lower trophic magnification slope, shortened food chain and fish lifespan. The SEM revealed strong impacts of human activities on MeHg levels in fish. In the future, China may face elevated MeHg levels in fish with the ongoing recovery of food web ecology, highlighting the importance of local policies.
DOI: 10.6084/m9.figshare.24779481.v1
title: Human activities shape important geographic differences in fish mercury concentration levels

description: Fish consumption is a major route of human exposure to mercury (Hg), yet limited understanding of how anthropogenic activities drive geographic variations in fish Hg worldwide hinders effective Hg pollution management. Here we characterized global geographic variations in total Hg (THg) and methylmercury (MeHg), compared THg and MeHg levels between the US and China, and used a structural equation model (SEM) to link geographic variability of MeHg in fish to human activities. Despite previously reported higher Hg emissions in China, Chinese fish have lower THg and MeHg than the US due to lower trophic magnification slope, shortened food chain and fish lifespan. The SEM revealed strong impacts of human activities on MeHg levels in fish. In the future, China may face elevated MeHg levels in fish with the ongoing recovery of food web ecology, highlighting the importance of local policies.
DOI: 10.15468/dl.fky3k4
title: Occurrence Download

description: A dataset containing 13672 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Litoria nasuta (Gray, 1842)"
 ]
}

 The dataset includes 13672 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032578-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3m2mbv
title: Occurrence Download

description: A dataset listing the 147 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is National Herbarium of Victoria (MEL) AVH data",
 "TaxonKey is Cyperus L."
 ]
}

 The dataset's 147 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032551-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z7ckkx
title: Occurrence Download

description: A dataset containing 607514 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Plant"
 ]
}

 The dataset includes 607514 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032547-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5mzb2
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murina aurata A.Milne-Edwards, 1872"
 ]
}

 The dataset includes 62 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032579-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9prbbj
title: Occurrence Download

description: A dataset containing 5061 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Litoria nudidigita (Copland, 1963)"
 ]
}

 The dataset includes 5061 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032580-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6csfsr
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Philautus kerangae Dring, 1987"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032582-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6bgmwc
title: Occurrence Download

description: A dataset containing 33914 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-25.16059 17.36638,-25.54567 17.24337,-25.58846 17.05618,-25.47615 16.78341,-24.54553 16.33415,-24.95736 14.91149,-24.9841 14.72964,-24.59902 14.56919,-23.43842 14.7029,-22.94638 15.03985,-22.46502 16.02929,-22.45967 16.19509,-22.75918 17.03478,-22.91428 17.04548,-24.25672 16.90107,-25.04828 17.40917,-25.16059 17.36638))"
 ]
}

 The dataset includes 33914 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032581-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zg6mcm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Allium neopolitanum Cirillo, Asparagus drepanophyllus Welw. ex Baker, Cistus ×laxus Aiton, Cyperus seemannianus Boeckeler, Prunus setulosa Batalin, Pseudosasa hindsii (Munro) S.L.Chen & G.Y.Sheng ex T.G.Liang)",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence, Material citation, Living Specimen)",
 "CoordinateUncertaintyInMeters is less than or equal to 10000",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032584-240906103802322/datasets/export for details.
DOI: 10.5281/zenodo.13846602
title: The conda environment for HamEPC