cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34622/datarepositorium/qzbuev
title: Map4Scrutiny: a Linked Open Data approach on politicians interest registers - support files

description: This dataset includes all the files mentioned in the dissertation: "Map4Scrutiny: a Linked Open Data Prototype for Politicians Interest Registers". These include the code used to scrap and source the original files, the vocabularies created, the data itself, and the shapes of the data in ShExC together with the Shape Map to run validation.
DOI: 10.5281/zenodo.6412092
title: Longitudinal data from Global Innovation Index (2011-2021)

description: Panel data file for the period from 2011–2021 with the seven pillars of Global Innovation Index.
DOI: 10.5281/zenodo.6412091
title: Longitudinal data from Global Innovation Index (2011-2021)

description: Panel data file for the period from 2011–2021 with the seven pillars of Global Innovation Index.
DOI: 10.6084/m9.figshare.19513999
title: The air-breathing Alaska blackfish (Dallia pectoralis) suppresses neuronal mitochondrial reactive oxygen species to survive cold hypoxic winters

description: Dataset from an oroboros microrespirometer from alaska blackfish brain homogenates. Black fish were either exposed to warm (15oC) normoxia, cold (5oC) normoxia, or cold hypoxia. We recorded mitochondrial respiration and ROS production (amplex red system)
DOI: 10.6084/m9.figshare.19513999.v1
title: The air-breathing Alaska blackfish (Dallia pectoralis) suppresses neuronal mitochondrial reactive oxygen species to survive cold hypoxic winters

description: Dataset from an oroboros microrespirometer from alaska blackfish brain homogenates. Black fish were either exposed to warm (15oC) normoxia, cold (5oC) normoxia, or cold hypoxia. We recorded mitochondrial respiration and ROS production (amplex red system)
DOI: 10.6084/m9.figshare.19513693
title: WLTOG: An optimization approach for wild large-range target omnidirectional geolocation based on monocular PTZ camera

description: As an omnidirectional monocular camera, the pan-tilt-zoom (PTZ) camera has been widely employed in urban governance, forest fire protection, traffic supervision due to its omnidirectional coverage and inexpensive cost. Traditional monocular camera geolocation research focuses on small-range geolocation with a central projection camera under ideal conditions, making it difficult to meet the requirements of omnidirectional coverage and large-range geolocation for PTZ cameras. In view of this, this paper proposed a wild large-range target omnidirectional geolocation (WLTOG) algorithm. Firstly, the WLTOG algorithm transforms the target in a single image to the camera's visual center, obtaining the camera posture value. Then, it fits the nonlinear mapping relationship between multiple pairs of PTZ camera postures and the geospatial coordinates by using high-dimensional overdetermined equation, and finally realizes the bidirectional calculation between pixel coordinates and geospatial coordinates. The experimental PTZ camera is mounted on a communication tower in wild hilly environment. This method can be used to construct an omnidirectional geolocation relationship that meets the requirements of omnidirectional geolocation within 945m based on unknown accurate internal and external orientation elements, and low requirements for wild hardware installation. The WLTOG algorithm is conducive to the geometric measurement of a single image, GIS-augmented video surveillance, and 3D object recognition.
DOI: 10.6073/pasta/b3d8f5e01ebba0da8fd3a2a78671c0ce
title: Effect of salt water intrusion on the distribution of invertebrates in a GA tidal freshwater marshes from the GCE Seawater Addition Long-Term Experiment (SALTEx) project.

description: To characterize the effect of persistent and episodic salt water intrusion on the distribution of common freshwater marsh invertebrates, we monitored the density of adult and juvenile fiddler crabs and snails. Prior to the start of salt water addition treatments, we collected data on the distribution of crabs and snails in all 30 experimental plots (6 replicates of 5 treatments: pressed salt water addition, pulsed salt water addition, fresh water addition, procedural control structure, and control no structure). In each experimental plot, we counted the number of adult and juvenile fiddler crab burrows and snails visible on the marshs surface in a 50cm x 75cm plot (juvenile fiddler crabs were counted in only half of this area) that was positioned in the Northeastern corner of each experimental plot. Initial data was collected in March 2014. A Bentho Torch was used to measure the concentrations of cyanobacteria, diatoms, and green algae on the marsh surface in 2015 and 2016.
DOI: 10.6073/pasta/7464fe6528c4cb2d04fb99642f19a433
title: Green algae, cyanobacteria and diatom concentrations from the GCE-LTER Seawater Addition Long-Term Experiment (SALTEx) Project

description: SALTEx (Seawater Addition Long-Term Experiment) is a field experiment designed to simulate saltwater intrusion in a tidal freshwater wetland to predict how chronic (Press) and acute (Pulse) salinization will affect this and other tidal freshwater ecosystems. The SALTEx experiment was initiated in 2012 and consists of 31 field plots , each 2.5 m on a side. There are three treatments (Press, Pulse, and Fresh) and two types of controls (with and without sides), each consisting of six replicates. The Press treatment plots receive regular (4 times each week) additions of a mixture of seawater and fresh river water. Pulse plots receive the same mixture of seawater and river water during September and October, which is historically a time of low flow in the river when natural saltwater intrusion occurs. The Fresh treatment plots receive regular additions of fresh river water. Treatment water is added during low tide to facilitate its infiltration into the soil, and all plots are inundated by astronomical tides at high tide. We are measuring the abundance of benthic algae with a BenthoTorch as one of the response variables for the SALTEx project.
DOI: 10.6073/pasta/dadbaa37af67d97c76552d0700eab16a
title: Daily porewater salinity, conductivity, and temperature measurements from the GCE-LTER Seawater Addition Long-Term Experiment (SALTEx) Project

description: The Georgia Coastal Ecosystems LTER Seawater Addition Long-Term Experiment (SALTEx) is a large-scale field experiment designed to simulate saltwater intrusion in a tidal freshwater wetland to predict how chronic (Press) and acute (Pulse) salinization will affect this and other tidal freshwater ecosystems. Six porewater well samples were collected four days per week from six treatment plots using a peristalsis pump. Salinity and conductivity were measured from the samples using a handheld conductivity/salinity meter. In addition, water delivery treatments were conducted four days per week after porewater samples were collected.
DOI: 10.6073/pasta/335d605abdcd984713006fbcd86c9f97
title: Plant Responses to the GCE-LTER Seawater Addition Long Term Experiment (SALTEx) from 2013 to 2016

description: This study was conducted in a tidal freshwater marsh (31°20’16” N, 81°27’52” W) on the Altamaha River, GA. Each plot was defined by a 2.5 m x 2.5 m polycon frame, inserted 12 cm into the soil. The frames had drain holes in the sides above the soil surface that were plugged when plots were watered but open otherwise to allow tidal exchange. The plots were randomly assigned to five treatments. Plots were monitored without imposing any treatments in 2013. Treatments started on April 14, 2014. Plots receive diluted saltwater (press and pulse of saline water treatments, n=6), freshwater (freshwater addition treatment, n=6), or no water additions (control with frame and control treatments, n=6 and 7, respectively). The press plots received additions of a mixture of seawater and fresh river water four times each week. Pulse plots received the same mixture but only for 8 weeks in September and October. The freshwater treatment plots received additions of fresh river water four times each week. To document treatment effects on the plant community, we measured stem height, photosynthesis, and percent cover of plants, and blocking of light by the vegetation. We used the same 0.75 m x 0.75 m subplot inside each plot for plant measurements, and took the measurements 3 – 6 times during each growing season from 2013 to 2016. We measured height of all stems of Zizaniopsis miliacea and Persicaria hydropiperoides, and all leaves of Pontederia cordata. In each plot, we chose the tallest individual of those three species and measured their photosynthetic rates using LCi photosynthesis System (ADC BioScientific Ltd, Hoddesdon, UK). Around the same dates, we also visually estimated the percent cover of Ludwigia repens, Persicaria hydropiperoides, Pontederia cordata, and Zizaniopsis miliacea in the entire 2.5 m x 2.5 m plot. We summed the stem heights by species as a first approximation of species biomass. We measured the photosynthetically active radiation (PAR) above top and underneath (10 cm above the soil) the plant canopy in each plot using a Sunscan Canopy Analysis System (AT Delta-T Devices Cambridge England) 4-6 times during each growing season from 2014 to 2016. We report the proportion of light penetrating the canopy.
DOI: 10.6073/pasta/4f6e15dcfd1abfa62f2c582f39804730
title: Ants Under Climate Change at Harvard Forest and Duke Forest 2009-2015

description: Experimental field studies are needed to understand the consequences of global climatic change for local community structure and associated ecosystem processes. We are using 5-m diameter open-top environmental chambers and 1m pvc minichambers to simultaneously manipulate air and soil temperatures at the Harvard Forest and at the Duke Forest in North Carolina. These field manipulations are designed to reveal the effects of temperature increases on the populations, communities, and associated ecosystem services of assemblages of ground-foraging ants. Ants are a model taxon for studying effects of global climatic change because they comprise the dominant fraction of animal biomass in many terrestrial communities and because they provide essential ecosystem services, including soil turnover, decomposition, and seed dispersal. The experiment is designed to test three predictions: 1. Projected atmospheric warming will lead to declines in ant species’ abundances at the warmer, southern extent of their ranges in the US. Conversely, projected atmospheric warming will lead to increases in abundance or range extensions of ant species at the cooler, northern extent of their ranges in the US. 2. Warming will change the relative abundance and composition of ant communities, and will lead to the loss of ant biodiversity. 3. Warming will potentially diminish ecosystem processes and services provided by ants, particularly with respect to the dispersal of seeds. To explore these, we are conducting two experiments. In one experiment, twelve open-top chambers at each site which will each be exposed air temperatures ranging from 1.5 to 7 deg C above ambient; soil temperatures will be increased simultaneously from 0 to ~ 2 deg C. After an initial year of pre-intervention measurements, the experiment will run for 3 consecutive years of continuous warming. In the second experiment, shade cloth and plastic greenhouse sheeting will be used to increase or decrease temperature by 0.5 deg C in sixty minichambers. The minichamber experiment was conducted in 2009 and will continue into 2010. The response variables measured in both experiments include ant activity, population densities and colony sizes of focal species, ant community diversity and species composition, and rates of seed dispersal and predation as mediated by ants.
DOI: 10.6073/pasta/1991371638f8e2efc783f6bdd04cf80c
title: Ant responses to experimental warming and plant diversity:BAC: Biodiversity and Climate

description: Climate changes forecast for our region by GCM???s and shifts in biodiversity and composition each have the potential to alter ecosystem functioning; their interactive effects are unknown. The "BAC" experiment is designed to determine the direct and interactive effects of plant species numbers, plant community composition, temperature, and precipitation on 11 productivity, C and N dynamics, stability, and plant, microbe, and insect species abundances in CDR grassland ecosystems.
DOI: 10.6073/pasta/1333b6c2cda080536479b918d8caa483
title: Daily mean iButton soil and air temp, air relative humidity:BAC: Biodiversity and Climate

description: Climate changes forecast for our region by GCM???s and shifts in biodiversity and composition each have the potential to alter ecosystem functioning; their interactive effects are unknown. The "BAC" experiment is designed to determine the direct and interactive effects of plant species numbers, plant community composition, temperature, and precipitation on 11 productivity, C and N dynamics, stability, and plant, microbe, and insect species abundances in CDR grassland ecosystems.
DOI: 10.6073/pasta/214b327bc6fc0a240ec705b339e6dd83
title: Plant aboveground biomass data: BAC: Biodiversity and Climate

description: Climate changes forecast for our region by GCM???s and shifts in biodiversity and composition each have the potential to alter ecosystem functioning; their interactive effects are unknown. The "BAC" experiment is designed to determine the direct and interactive effects of plant species numbers, plant community composition, temperature, and precipitation on 11 productivity, C and N dynamics, stability, and plant, microbe, and insect species abundances in CDR grassland ecosystems.
DOI: 10.5517/ccdc.csd.cc23d4k7
title: CCDC 1948088: Experimental Crystal Structure Determination

description: Related Article: Liaw Chia-Ching|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc23fxvb
title: CCDC 1949802: Experimental Crystal Structure Determination

description: Related Article: Liaw Chia-Ching|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28ng4k
title: CCDC 2105028: Experimental Crystal Structure Determination

description: Related Article: Siyuan Chen|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc29dqk0
title: CCDC 2127392: Experimental Crystal Structure Determination

description: Related Article: Bin Hou|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc29dsgz
title: CCDC 2127451: Experimental Crystal Structure Determination

description: Related Article: Matthias Westerhausen, Silvio Preusser, Helmar Görls, Wolfgang Imhof|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc29dzc2
title: CCDC 2127634: Experimental Crystal Structure Determination

description: Related Article: Gloria Sánchez-Cabrera, Francisco J. Zuno-Cruz, Mariana Carpio-Granillo, Erik G. Rojo-Gómez, Daniel O. Gónzalez-Abrego, Claudia Coronel-Olivares, Miguel F. Caviedes, Noemi Andrade-López, Marco Antonio Leyva-Ramírez, María de Jesús Rosales-Hoz|2021|CSD Communication|||
description: Related Article: Mariana Carpio-Granillo, Francisco J. Zuno-Cruz, Gloria Sánchez-Cabrera, Erik G. Rojo-Gómez, Daniel O. González-Ábrego, Claudia Coronel-Olivares, Miguel F. Caviedes, Noemí Andrade-López, María J. Rosales-Hoz, Marco A. Leyva|2022|Polyhedron|217|115726|doi:10.1016/j.poly.2022.115726
DOI: 10.5517/ccdc.csd.cc29dzd3
title: CCDC 2127635: Experimental Crystal Structure Determination

description: Related Article: Gloria Sánchez-Cabrera, Francisco J. Zuno-Cruz, Mariana Carpio-Granillo, Erik G. Rojo-Gómez, Daniel O. Gónzalez-Abrego, Claudia Coronel-Olivares, Miguel F. Caviedes, Noemi Andrade-López, Marco Antonio Leyva-Ramírez, María de Jesús Rosales-Hoz|2021|CSD Communication|||
description: Related Article: Mariana Carpio-Granillo, Francisco J. Zuno-Cruz, Gloria Sánchez-Cabrera, Erik G. Rojo-Gómez, Daniel O. González-Ábrego, Claudia Coronel-Olivares, Miguel F. Caviedes, Noemí Andrade-López, María J. Rosales-Hoz, Marco A. Leyva|2022|Polyhedron|217|115726|doi:10.1016/j.poly.2022.115726
DOI: 10.5517/ccdc.csd.cc29dzf4
title: CCDC 2127636: Experimental Crystal Structure Determination

description: Related Article: Gloria Sánchez-Cabrera, Francisco J. Zuno-Cruz, Mariana Carpio-Granillo, Erik G. Rojo-Gómez, Daniel O. Gónzalez-Abrego, Claudia Coronel-Olivares, Miguel F. Caviedes, Noemi Andrade-López, Marco Antonio Leyva-Ramírez, María de Jesús Rosales-Hoz|2021|CSD Communication|||
description: Related Article: Mariana Carpio-Granillo, Francisco J. Zuno-Cruz, Gloria Sánchez-Cabrera, Erik G. Rojo-Gómez, Daniel O. González-Ábrego, Claudia Coronel-Olivares, Miguel F. Caviedes, Noemí Andrade-López, María J. Rosales-Hoz, Marco A. Leyva|2022|Polyhedron|217|115726|doi:10.1016/j.poly.2022.115726
DOI: 10.5517/ccdc.csd.cc29f0qh
title: CCDC 2127676: Experimental Crystal Structure Determination

description: Related Article: Anke Schwarzer, Edwin Weber|2021|CSD Communication|||
DOI: 10.48323/qwmdb-rad80
title: MS_Hamburg_2022

description: MS Raw Data collected in Hamburg, Samples send from Innsbruck to Hamburg. Measurements from 01-01-2022 to 4-04-2022
DOI: 10.5258/soton/wp00735
title: Gridded population estimates for Ukraine using UN COD-PS estimates 2020, version 2.0

description: These data were produced by WorldPop at the University of Southampton and the ‘Smart Cities and Spatial Development’ team at the German Remote Sensing Data Center (DFD) of the German Aerospace Center (DLR). These data include gridded estimates of population at approximately 100m and 1km resolution for 2020, along with estimates of the number of people belonging to individual age-sex groups. These results were produced using subnational population estimates for Ukraine in 2020 provided in the Common Operational Dataset on Population Statistics (COD-PS) and building height/area/fraction/volume covariates extracted from the World Settlement Footprint (WSF) imperviousness and WSF-3D by DLR. The constrained top-down disaggregation method was used to produce the datasets. The modelling work and geospatial data processing was led by Bondarenko M., Palacios-Lopez D., Sorichetta A., Leasure D.R., ,Zeidler J., Marconcini M., and Esch T.. Oversight was provided by Tatem A.J. Internal WorldPop peer reviews that helped to improve the results and documentation was provided by Lazar A.N..
DOI: 10.5281/zenodo.6412122
title: Cotton-based nucleic acid extraction

description: <strong>Abstract</strong>: Nucleic acid amplification technique (NAAT)-assisted detection is the primary intervention for pathogen molecular diagnostics. However, NAATs such as quantitative real-time polymerase chain reaction (qPCR) require prior purification or extraction of target nucleic acid from the sample of interest since the latter often contains polymerase inhibitors. Similarly, genetic disease screening is also reliant on the successful extraction of pure patient genomic DNA from the clinical sample. However, such extraction techniques traditionally utilize spin-column techniques that in turn require centralized high-speed centrifuges. This hinders any potential deployment of qPCR- or PCR-like NAAT methods in resource-constrained settings. The development of instrument-free nucleic acid extraction methods, especially those utilizing readily available materials would be of great interest and benefit to NAAT-mediated molecular diagnosis workflows in resource-constrained settings. In this report, we screened medical-grade cotton, a readily available over-the-counter biomaterial to extract <em>E. coli</em> genomic DNA (gDNA) spiked in 30%, 45%, and 60% serum. The extraction was carried out in a completely instrument-free manner using cotton and a sterilized toothpick and was completed in 30 min (with using chaotropic salt) or 10 min (without using chaotropic salt). The quality of the extracted DNA was then probed using PCR followed by agarose gel analysis, qPCR, and sequencing. Our method demonstrated that the high-quality DNA extraction could be performed both with or without using a chaotropic salt, albeit with a difference in the quality of the extracted DNA
DOI: 10.5281/zenodo.6412121
title: Cotton-based nucleic acid extraction

description: <strong>Abstract</strong>: Nucleic acid amplification technique (NAAT)-assisted detection is the primary intervention for pathogen molecular diagnostics. However, NAATs such as quantitative real-time polymerase chain reaction (qPCR) require prior purification or extraction of target nucleic acid from the sample of interest since the latter often contains polymerase inhibitors. Similarly, genetic disease screening is also reliant on the successful extraction of pure patient genomic DNA from the clinical sample. However, such extraction techniques traditionally utilize spin-column techniques that in turn require centralized high-speed centrifuges. This hinders any potential deployment of qPCR- or PCR-like NAAT methods in resource-constrained settings. The development of instrument-free nucleic acid extraction methods, especially those utilizing readily available materials would be of great interest and benefit to NAAT-mediated molecular diagnosis workflows in resource-constrained settings. In this report, we screened medical-grade cotton, a readily available over-the-counter biomaterial to extract <em>E. coli</em> genomic DNA (gDNA) spiked in 30%, 45%, and 60% serum. The extraction was carried out in a completely instrument-free manner using cotton and a sterilized toothpick and was completed in 30 min (with using chaotropic salt) or 10 min (without using chaotropic salt). The quality of the extracted DNA was then probed using PCR followed by agarose gel analysis, qPCR, and sequencing. Our method demonstrated that the high-quality DNA extraction could be performed both with or without using a chaotropic salt, albeit with a difference in the quality of the extracted DNA
DOI: 10.7916/4kpg-6904
title:  Reassessing seasonal sea ice predictability of the Pacific-Arctic sector using a Markov model: supplemental data
DOI: 10.6084/m9.figshare.19514110.v1
title: OTU table using the eukaryotic V4 primers (Stoeck et al, 2010) from planktonic communities collected during NBP19-10.

description: <b>Dataset S1.</b> OTU table using paired-end reads. T1-5 are the taxonomic ranks, acc the GenBank accession number of the corresponding reference, id% is the percentage of identity, occurrence represents the number of samples in which the OTUs was present, readnumber the total read number. The samples are labelled as following: station_depth layer_size. _20 for the microsize, _5 for the nanosize and _0.2 for the picosize. <b>Dataset S2.</b> OTU table using forward reads. Accession is the GenBank accession number of the corresponding reference, Btaxo_rank1-6, Bgenus and Bsp are the taxonomic ranks from PR2, occurrence represents the number of samples in which the OTUs was present, readnumber the total read number. The samples are labelled as following: station_depth layer_size. _20 for the microsize, _5 for the nanosize and _0.2 for the picosize <b>Dataset S3.</b> OUT table using paired-end reads with at least 10 reads and then rarefied. T1-5 are the taxonomic ranks, acc the GenBank accession number of the corresponding reference, id% is the percentage of identity, Trophic is the trophic mode for the OTUs based on the literature. Reference_Trophic is the reference if different from the main text, occurrence represents the number of samples in which the OTUs was present, readnumber the total read number. The samples are labelled as following: station_depth layer_size. _20 for the microsize, _5 for the nanosize and _0.2 for the picosize <br>
DOI: 10.15482/usda.adc/1526070
title: Data from: Field Trapping and Flight Capacity of Eucosma giganteana (Riley) (Lepidoptera: Tortricidae) in Response to Behaviorally Active Congeneric Semiochemicals in Novel Silflower Agroecosystems
DOI: 10.17632/z483h65xrp.2
title: Observational study 2022

description: This cross-sectional study targeted residents in Kumejima island, Okinawa prefecture, in Japan aged 20–75 years as a part of the KDHP (Kumejima Digital Health Project) between June 2018 and December 2019.