cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.24355/dbbs.084-202403130624-0
title: Database of recorded serial manufactured MLK-buildings (GDR) (Release 2)

description: Lightweight construction in structural engineering meets the principles of contemporary requirements for resource-efficient design and has already established itself as a building block for sustainable management in the construction industry of the high modernism. However, little is known about the planning, execution and sale of marketable lightweight metal structures, which were developed in parallel in the GDR and the Federal Republic of Germany under disparate conditions from the end of the 1960s onwards. The "VEB Metalleichtbaukombinat" (MLK), a association of enterprises of structural steel engineering in the GDR, represents an association of constructive steel construction companies in the GDR in the years 1969 to 1990. In order to record and classify the serial manufactured buildings from the years 1969 to 1989, it is necessary to evaluate corresponding archival records, interviews with contemporary witnesses and material investigations, which provide the basis for a critical assessment of serial manufactured buildings built and still standing today. In the subsequent analysis from an industrial archaeological perspective, existing serial manufactured MLK buildings will be viewed from the perspective of monument conservation. Specific characteristics of individual systems can be derived from hall structures, such as the centre distances of the frames, the skylights and the roof pitch and shape given via the supporting structure. These represent the attributes for the manual as well as for the systematic evaluation of aerial photographs. For this purpose, the approach of deep learning, a special method of machine learning, is used to automatically record such structures. Submission of additional locations is encouraged via Email. Publication of the data will make use of revisions, released irregularly. The focus of the locations is on serially manufactured steel buildings with lattice construction, but the buildings may also be useful without serial features or with solid wall beams. The content is a compilation of recorded locations of the "Typ Ruhland" rod network and the "KT60L" sports hall extension of the MKL (GDR). Release 2 adds more locations for these two building types. In addition, coordinates for the sports hall types "GT60L" or "GT120L" and "42x24" or "24x42" have been added. These hall types contain the room structure "Type Weimar" (GT) or the rod net folding system "Type Berlin" (42x24).
DOI: 10.15468/dl.fxw2wy
title: Occurrence Download

description: A dataset containing 11367947 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculaceae"
 ]
}

 The dataset includes 11367947 records from 7008 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002037-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8ghze
title: Occurrence Download

description: A dataset containing 1804280 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Tanzania, United Republic of"
 ]
}

 The dataset includes 1804280 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002221-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gz4eyb
title: Occurrence Download

description: A dataset containing 771542 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is FrogID"
 ]
}

 The dataset includes 771542 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002226-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28466264
title: Supplementary tables for manuscript "<b>MicroRNA dysregulation in cow's jejunum, jejunal lymph node, and </b><b>caecal Peyer's patch</b><b> during </b><b><i>Mycobacterium avium</i></b><b> spp. paratuberculosis infection</b>"

description: Table S1: summary of sample information.Table S2: General review of sequencing information.Table S3: Expression profile of miRNAs in three tissues and list of differentially expressed miRNAs identified per tissue per comparison.Table S4: Target genes predicted for the differentially expressed miRNAs per tissue per comparison.Table S5: Funcitonal enrichment for target genes of differentially expressed miRNAs per tissue per comparison.
DOI: 10.15468/dl.avtwk3
title: Occurrence Download

description: A dataset containing 168379 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lagopus lagopus (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "Continent is Europe",
 "HasCoordinate is true",
 "Year is 2000,2025",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 168379 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002225-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p3b9q4
title: Occurrence Download

description: A dataset containing 4672 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Nyctiprogne leucopyga (von Spix, 1825)"
 ]
}

 The dataset includes 4672 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002227-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14914465
title: MOHID-Land Preconfigured Hydrological Model for the Pedro do Rio Watershed: Ready-to-Run Simulations and Results

description: This dataset contains the MOHID-Land model developed for the Pedro do Rio watershed, located in the mountainous region of Petrópolis, Rio de Janeiro, Brazil. The model includes all necessary configuration files required to run the simulations and obtain results. It has been preconfigured to support scenarios S1 to S6, as described in the paper: "Enhancing River Flow Predictions in MOHID-Land Through Integration of Gridded Soil Data and Hydraulic Parameters Using the MOHID Soil Tool."

 

System Requirements and Execution Instructions

To run the simulations, the user must have Windows 10/11 (64-bit) and extract the contents of the provided ZIP file.



Navigate to the exe folder.

Double Click on the .bat file corresponding to the desired simulation. (the user can access the online log in the directory Log and the correspondent simulation)


It is important to note that each simulation is structured by year, and the user must execute the simulation for the previous year before running the next one.

 

Output Organization



Simulation results are stored in the Results folder, organized by year and simulation scenario.

Log files for each simulation are also available in the directory Logs.

All data referenced in the paper correspond to the Node_Pedro do Rio, located in the Run1 folder within each year and simulation directory. The user can open this file useing Microsft Excel software or equal.


 

Additional Resources



Detailed instructions for running the MOHID-Land model can be found at: http://wiki.mohid.com/index.php?title=Mohid_Landhttp://wiki.mohid.com/index.php?title=Mohid_Land

The MOHID-Land source code is available at: https://github.com/Mohid-Water-Modelling-System/Mohid


 

Soil Hydraulic Parameter Adjustments

Modifications to the PorousMedia.dat file, which contains the soil hydraulic coefficients, were derived using the MOHID Soil Tool (MST).



MOHID Soil Tool repository: https://github.com/dhiegosales/MOHID-SOIL-TOOL

The dataset used to generate the soil hydraulic coefficients is available at: https://doi.org/10.5281/zenodo.14913166


This dataset provides a ready-to-run hydrological model, enabling researchers to simulate and analyze river flow dynamics under different soil hydraulic conditions using MOHID-Land.
DOI: 10.5281/zenodo.14914466
title: MOHID-Land Preconfigured Hydrological Model for the Pedro do Rio Watershed: Ready-to-Run Simulations and Results

description: This dataset contains the MOHID-Land model developed for the Pedro do Rio watershed, located in the mountainous region of Petrópolis, Rio de Janeiro, Brazil. The model includes all necessary configuration files required to run the simulations and obtain results. It has been preconfigured to support scenarios S1 to S6, as described in the paper: "Enhancing River Flow Predictions in MOHID-Land Through Integration of Gridded Soil Data and Hydraulic Parameters Using the MOHID Soil Tool."

 

System Requirements and Execution Instructions

To run the simulations, the user must have Windows 10/11 (64-bit) and extract the contents of the provided ZIP file.



Navigate to the exe folder.

Double Click on the .bat file corresponding to the desired simulation. (the user can access the online log in the directory Log and the correspondent simulation)


It is important to note that each simulation is structured by year, and the user must execute the simulation for the previous year before running the next one.

 

Output Organization



Simulation results are stored in the Results folder, organized by year and simulation scenario.

Log files for each simulation are also available in the directory Logs.

All data referenced in the paper correspond to the Node_Pedro do Rio, located in the Run1 folder within each year and simulation directory. The user can open this file useing Microsft Excel software or equal.


 

Additional Resources



Detailed instructions for running the MOHID-Land model can be found at: http://wiki.mohid.com/index.php?title=Mohid_Landhttp://wiki.mohid.com/index.php?title=Mohid_Land

The MOHID-Land source code is available at: https://github.com/Mohid-Water-Modelling-System/Mohid


 

Soil Hydraulic Parameter Adjustments

Modifications to the PorousMedia.dat file, which contains the soil hydraulic coefficients, were derived using the MOHID Soil Tool (MST).



MOHID Soil Tool repository: https://github.com/dhiegosales/MOHID-SOIL-TOOL

The dataset used to generate the soil hydraulic coefficients is available at: https://doi.org/10.5281/zenodo.14913166


This dataset provides a ready-to-run hydrological model, enabling researchers to simulate and analyze river flow dynamics under different soil hydraulic conditions using MOHID-Land.
DOI: 10.15468/dl.qhkbpq
title: Occurrence Download

description: A dataset containing 16382 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Scottish river macro-invertebrate records from 2007 collected by SEPA"
 ]
}

 The dataset includes 16382 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002229-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hn7ue5
title: Occurrence Download

description: A dataset containing 12268 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "StateProvince is Utah",
 "TaxonKey is Nymphalidae"
 ]
}

 The dataset includes 12268 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002230-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.thsanz
title: Occurrence Download

description: A dataset containing 2952 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Fortalecimiento de la Colección de fotocolectas biológicas (CFB): una propuesta del uso de la imagen digital al servicio del conocimiento de la biodiversidad, Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (vertebrados), KUBI Mammalogy Collection, CNMA/Colección Nacional de mamíferos, Mamíferos de Nuevo León: distribución y taxonomía, Biodiversity Research and Teaching Collections - TCWC Vertebrates, Computarización de las colecciones de vertebrados terrestres de la Escuela Nacional de Ciencias Biológicas, IPN Fase 4 (Mamíferos), LACM Vertebrate Collection, Biodiversidad mastozoológica del Eje Volcánico Transversal)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bassariscus astutus (Lichtenstein, 1830)",
 "Year 1950-2025"
 ]
}

 The dataset includes 2952 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002231-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v2zrd2
title: Occurrence Download

description: A dataset containing 149734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tetrao urogallus Linnaeus, 1758",
 "HasGeospatialIssue is false",
 "Continent is Europe",
 "HasCoordinate is true",
 "Year is 2000,2025",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 149734 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002228-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14914452
title: Latitudinal Biotic Interaction Hypothesis revisited in worldwide honey samples: data and code

description: Data files and R scripts to reproduce analyses published in Cirtwill et al. (2025) ``The Latitudinal Biotic Interaction Hypothesis revisited'', BMC Ecology.

Data files are all tab-separated .tsv. Taxonomic group (bacteria or plants) and level (ZOTUs, genera, or families) are indicated in the file names. The file 'focal_families.tsv' includes only bacterial families of special interest as described in the main text.

There are two scripts. 'main_analyses.R' performs all analyses used in the main text, plus parallel analyses for genera and families (results shown in SI). 'supplemental_analyses.R' performs all other analyses shown in the SI.

All of the following authors contributed to data collection and manuscript preparation:

Alyssa R. Cirtwill, Tomas Roslin, Pablo Peña-Aguilera, Agathe Agboto, William Bercê, Svetlana N. Bondarchuk, Robert Brodschneider, Behzad Heidari, Camara Kaizirege, Justine Muhoro Nyaga, Ojonugwa Ekpah, Gonzalo Ossa Gomez, Claudia Paz, Christian Pirk, Amir Salehi-Najafabadi, Anneli Salonen, Chantal Soloniaina, and Helena Wirta.

For author affiliations, please see manuscript.
DOI: 10.5281/zenodo.14914453
title: Latitudinal Biotic Interaction Hypothesis revisited in worldwide honey samples: data and code

description: Data files and R scripts to reproduce analyses published in Cirtwill et al. (2025) ``The Latitudinal Biotic Interaction Hypothesis revisited'', BMC Ecology.

Data files are all tab-separated .tsv. Taxonomic group (bacteria or plants) and level (ZOTUs, genera, or families) are indicated in the file names. The file 'focal_families.tsv' includes only bacterial families of special interest as described in the main text.

There are two scripts. 'main_analyses.R' performs all analyses used in the main text, plus parallel analyses for genera and families (results shown in SI). 'supplemental_analyses.R' performs all other analyses shown in the SI.

All of the following authors contributed to data collection and manuscript preparation:

Alyssa R. Cirtwill, Tomas Roslin, Pablo Peña-Aguilera, Agathe Agboto, William Bercê, Svetlana N. Bondarchuk, Robert Brodschneider, Behzad Heidari, Camara Kaizirege, Justine Muhoro Nyaga, Ojonugwa Ekpah, Gonzalo Ossa Gomez, Claudia Paz, Christian Pirk, Amir Salehi-Najafabadi, Anneli Salonen, Chantal Soloniaina, and Helena Wirta.

For author affiliations, please see manuscript.
DOI: 10.15468/dl.dnkc64
title: Occurrence Download

description: A dataset containing 5825 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Fortalecimiento de las colecciones de ECOSUR. Primera fase (Mamíferos San cristóbal), Fortalecimiento de la Colección de fotocolectas biológicas (CFB): una propuesta del uso de la imagen digital al servicio del conocimiento de la biodiversidad, Ecología poblacional y conservación de Tapirus bairdii en la Sierra Mixe, Oaxaca, Censo nacional del jaguar y sus presas (1a etapa), Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (vertebrados), Observation.org, Nature data from around the World, CNMA/Colección Nacional de mamíferos, Mamíferos silvestres de la cuenca del río Mezquital-San Pedro, Durango-Nayarit, KUBI Mammalogy Collection)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Nasua narica (Linnaeus, 1766)",
 "Year 1950-2025"
 ]
}

 The dataset includes 5825 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002233-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.19584286
title: Data from Taskinen et al. (2022, Parasitology). Contrasting temperature responses in seasonal timing of cercariae shedding by Rhipidocotyle trematodes.

description: Three files with data and one metadata file with the description of variables. These data were used to prepare the paper 'Contrasting temperature responses in seasonal timing of cercariae shedding by Rhipidocotyle trematodes' autored by Jouni Taskinen, Jocelyn M. Choo, Ekaterina Mironova and Mikhail Gopko. The paper was accepted to Parasitology in 2022.
Abstract
Global warming is likely to lengthen the seasonal duration of larval release by parasites. We exposed freshwater mussel hosts, Anodonta anatina, from two high-latitude populations to high, intermediate, and low temperatures throughout the annual cercarial shedding period of the sympatric trematodes Rhipidocotyle fennica and R. campanula, sharing the same transmission pathway. At the individual host level, under warmer conditions, the timing of the cercarial release in both parasite species shifted towards seasonally earlier period while its duration did not change. At the host population level, evidence for the lengthening of larvae shedding period with warming was found for R. fennica. R. campanula started the cercarial release seasonally clearly earlier, and at a lower temperature, than R. fennica. Furthermore, the proportion of mussels shedding cercariae increased, while day-degrees required to start the cercariae shedding decreased in high-temperature treatment in R. fennica. In R. campanula these effects were not found, suggesting that warming can benefit more R. fennica. These results do not completely support the view that climate warming would invariably increase the seasonal duration of larval shedding by parasites, but emphasizes species-specific differences in temperature-dependence and in seasonality of cercarial release.
DOI: 10.6084/m9.figshare.27075208
title: Data for the Gopko et al. paper ''<b>Does phylogenetic relatedness impl</b><b>y </b><b>similar manipulative ability in parasites?</b>"

description: Many parasites can alter the behavior of their hosts in a manner that is beneficial for the parasite (parasitic manipulations). Obviously, examples of non-manipulative parasites also exist, however, their number might be underestimated because of the publication bias. Trematodes from the Diplostomidae family infecting fish eyes are often considered manipulators. However, only one species (<i>Diplostomum pseudospathaceum</i>) of this family has been shown to do so under controlled laboratory conditions. We experimentally studied whether another common diplostomid species (<i>Tylodelphys clavata</i>) manipulated the host defensive behavior using salmonids (<i>Salvelinus malma</i>) reared and infected in the laboratory. We tested fish activity, depth preference, and dip net avoidance (common fish defensive traits) under different light conditions. Although the experimental design was identical to those used earlier for <i>D. pseudospathaceum</i>, no manipulative abilities were detected in<i>T. clavata</i>. Infected fish did not differ from control in the expression of the defensive behavioral traits tested. Interestingly, fish activity was confounded with fish size in control but not in infected fish, however, this pattern does not seem to be a manipulation. Our results show that even closely related parasites occupying similar habitat niches can dramatically differ in their ability to manipulate host behavior.
DOI: 10.6084/m9.figshare.27075208.v1
title: Data for the Gopko et al. paper ''<b>Does phylogenetic relatedness impl</b><b>y </b><b>similar manipulative ability in parasites?</b>"

description: Many parasites can alter the behavior of their hosts in a manner that is beneficial for the parasite (parasitic manipulations). Obviously, examples of non-manipulative parasites also exist, however, their number might be underestimated because of the publication bias. Trematodes from the Diplostomidae family infecting fish eyes are often considered manipulators. However, only one species (<i>Diplostomum pseudospathaceum</i>) of this family has been shown to do so under controlled laboratory conditions. We experimentally studied whether another common diplostomid species (<i>Tylodelphys clavata</i>) manipulated the host defensive behavior using salmonids (<i>Salvelinus malma</i>) reared and infected in the laboratory. We tested fish activity, depth preference, and dip net avoidance (common fish defensive traits) under different light conditions. Although the experimental design was identical to those used earlier for <i>D. pseudospathaceum</i>, no manipulative abilities were detected in<i>T. clavata</i>. Infected fish did not differ from control in the expression of the defensive behavioral traits tested. Interestingly, fish activity was confounded with fish size in control but not in infected fish, however, this pattern does not seem to be a manipulation. Our results show that even closely related parasites occupying similar habitat niches can dramatically differ in their ability to manipulate host behavior.
DOI: 10.15468/dl.qt6grf
title: Occurrence Download

description: A dataset containing 652 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Spider species diversity from wet and dry habitats"
 ]
}

 The dataset includes 652 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002234-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j9eraw
title: Occurrence Download

description: A dataset containing 503 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Norwegian Species Observation Service",
 "TaxonKey is Tarsiger cyanurus (Pallas, 1773)"
 ]
}

 The dataset includes 503 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002236-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.