cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16894518
title: Data for "Full Microscopic Simulations Uncover Persistent Quantum Effects in Primary Photosynthesis"

description: This data set accompagnies the manucript Lorenzoni N., Lacroix T., Lim J., Tamascelli D., Huelga S. F. & Plenio M. B., Full Microscopic Simulations Uncover Persistent Quantum Effects in Primary Photosynthesis, arXiv:2503.17282, https://doi.org/10.48550/arXiv.2503.17282 (2025).

This dataset can be cited as Lorenzoni, N., & Lacroix, T. (2025). Data for "Full Microscopic Simulations Uncover Persistent Quantum Effects in Primary Photosynthesis" [Data set]. Zenodo. https://doi.org/10.5281/zenodo.16894519.

It contains DAMPF data:



Fenna-Matthews-Olson excitation energy transfer (FMO EET) electronic density matrix dynamics data at T = 77 K and T = 300K (Figures 3, 4, S2, S3)

2D spectra simulations of a dimeric unit at T = 77K (Figures 5, S5, S6)


and T-TEDOPA data:



dimer simulation results at T = 77 K and T = 300 K (Figure S1)

code to run the dimer simulation at T = 77 K and T = 300 K

chain coefficients for the FMO spectral density at T = 77 K and T = 300 K
DOI: 10.5281/zenodo.16894519
title: Data for "Full Microscopic Simulations Uncover Persistent Quantum Effects in Primary Photosynthesis"

description: This data set accompagnies the manucript Lorenzoni N., Lacroix T., Lim J., Tamascelli D., Huelga S. F. & Plenio M. B., Full Microscopic Simulations Uncover Persistent Quantum Effects in Primary Photosynthesis, arXiv:2503.17282, https://doi.org/10.48550/arXiv.2503.17282 (2025).

This dataset can be cited as Lorenzoni, N., & Lacroix, T. (2025). Data for "Full Microscopic Simulations Uncover Persistent Quantum Effects in Primary Photosynthesis" [Data set]. Zenodo. https://doi.org/10.5281/zenodo.16894519.

It contains DAMPF data:



Fenna-Matthews-Olson excitation energy transfer (FMO EET) electronic density matrix dynamics data at T = 77 K and T = 300K (Figures 3, 4, S2, S3)

2D spectra simulations of a dimeric unit at T = 77K (Figures 5, S5, S6)


and T-TEDOPA data:



dimer simulation results at T = 77 K and T = 300 K (Figure S1)

code to run the dimer simulation at T = 77 K and T = 300 K

chain coefficients for the FMO spectral density at T = 77 K and T = 300 K
DOI: 10.15468/dl.2un687
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Camelina sativa",
 "Country is Estonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 43 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021965-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5s84p
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.28_1",
 "TaxonKey is Lepyrodiclis holosteoides"
 ]
}

 The dataset includes 44 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021967-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wnctrd
title: Occurrence Download

description: A dataset containing 1215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((5.71703 50.81762,5.77258 50.81762,5.77258 50.84836,5.71703 50.84836,5.71703 50.81762))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia",
 "Year 2015-2025"
 ]
}

 The dataset includes 1215 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021966-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.8ulm47il
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (28 records)
DOI: 10.15468/dl.t4hg6h
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lydenburgia abbottii"
 ]
}

 The dataset includes 48 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021968-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cecqjn
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jubaeopsis caffra"
 ]
}

 The dataset includes 64 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021972-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fe6h4a
title: Occurrence Download

description: A dataset containing 2725 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Combretum micranthum",
 "Continent is Africa"
 ]
}

 The dataset includes 2725 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021970-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12948491
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.vrsk3y
title: Occurrence Download

description: A dataset containing 38231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Veronica sublobata"
 ]
}

 The dataset includes 38231 records from 281 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021973-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22008/fk2/ro58bw/exo4iq
title: KlimaInput_DKmodel.zip

description: Precipitation, Temperature and Reference Evapotranspiration. Download from DMI’s Frie data. The Precipitation data is based on data from DMI and subsequently bias-corrected by GEUS.
DOI: 10.15468/dl.cwuuw9
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Commelina foliacea"
 ]
}

 The dataset includes 133 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021974-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17044130
title: Experimental Raman, FTIR, optical Absorption, and XRD spectra of Rb2CuCl4(H2O)2

description: This dataset contains the raw and processed experimental data supporting the article:"Optical and Vibrational properties of Rb2CuCl4(H2O)2. Pseudo Jahn-Teller distortion" (L. Gómez, F. Aguado, R. Valiente and F. Rodríguez)
DOI: 10.5281/zenodo.17044129
title: Experimental Raman, FTIR, optical Absorption, and XRD spectra of Rb2CuCl4(H2O)2

description: This dataset contains the raw and processed experimental data supporting the article:"Optical and Vibrational properties of Rb2CuCl4(H2O)2. Pseudo Jahn-Teller distortion" (L. Gómez, F. Aguado, R. Valiente and F. Rodríguez)
DOI: 10.5281/zenodo.17044255
title: Special education schools in Spain. An analysis of public and private education offerings in Spain (2001-2024)

description: The data file was compiled using official statistics from the Spanish Ministry of Education: https://www.educacionfpydeportes.gob.es/en/servicios-al-ciudadano/estadisticas.htmlInformation on special education schools was selected based on their ownership (public, private concerted, or private non concerted) and the autonomous community.
DOI: 10.5281/zenodo.17044256
title: Special education schools in Spain. An analysis of public and private education offerings in Spain (2001-2024)

description: The data file was compiled using official statistics from the Spanish Ministry of Education: https://www.educacionfpydeportes.gob.es/en/servicios-al-ciudadano/estadisticas.htmlInformation on special education schools was selected based on their ownership (public, private concerted, or private non concerted) and the autonomous community.
DOI: 10.15468/dl.6pytqb
title: Occurrence Download

description: A dataset containing 623277 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Zimbabwe",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 623277 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021915-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s5xrhy
title: Occurrence Download

description: A dataset containing 524 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((31.70908 30.02215,15.85114 -46.32246,148.03833 -55.61068,144.30039 -11.20847,131.72732 -1.3539,99.10529 8.04759,102.50342 23.2259,62.4055 32.51412,31.70908 30.02215))",
 "OccurrenceStatus is Present",
 "TaxonKey is Sousa plumbea"
 ]
}

 The dataset includes 524 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021975-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vc933y
title: Occurrence Download

description: A dataset containing 227116 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Juncus biglumis, Juncus atratus, Juncus bulbosus, Juncus capitatus, Juncus gerardi, Juncus stygius, Cyperus fuscus, Eleocharis uniglumis, Scirpus cyperinus, Schoenoplectus triquetrer, Bolboschoenus laticarpus, Sparganium speirocephalum)"
 ]
}

 The dataset includes 227116 records from 1151 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021953-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r8svpn
title: Occurrence Download

description: A dataset containing 1783 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chiroptera",
 "Country is Mexico",
 "Geometry POLYGON((-117.218627 32.532920,-114.647827 32.787274,-114.818115 32.426340,-114.971923 32.236036,-114.933471 31.975463,-114.779663 31.793555,-114.757690 31.578535,-114.785156 31.175209,-114.647827 30.968189,-114.570922 30.595365,-114.543457 30.149877,-114.285278 29.912090,-113.862304 29.621221,-113.510742 29.625996,-113.153686 29.382175,-112.994384 29.070574,-112.752685 28.705042,-112.642822 28.627925,-112.675781 27.999251,-114.054565 28.004101,-114.186401 28.197926,-114.455566 28.796546,-114.730224 28.964894,-115.405883 29.449164,-115.861816 29.835878,-115.949707 30.287531,-116.130981 30.453409,-116.147460 30.727670,-116.312255 30.869225,-116.416625 30.968189,-116.400146 31.189308,-116.586914 31.353636,-116.751708 31.522361,-116.806640 31.742182,-117.053833 32.101189,-117.218627 32.532920))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1783 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000514-160430102343922/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k647bd
title: Occurrence Download

description: A dataset containing 3845 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus norvegicus (Berkenhout, 1769)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Country is United States of America",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 3000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 3845 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002152-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rwppia
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oncidium pyramidale Lindl.",
 "Country is Colombia"
 ]
}

 The dataset includes 25 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000514-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mweeh9
title: Occurrence Download

description: A dataset containing 3798 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Reithrodontomys fulvescens J.A.Allen, 1894",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Country is United States of America",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 3000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 3798 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002159-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jj02an
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odocoileus peruvianus (Gray)"
 ]
}

 The dataset includes 40 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000514-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kcr2vf
title: Occurrence Download

description: A dataset containing 7822 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Fortalecimiento de las colecciones de ECOSUR. Primera fase (Hongos Tapachula)",
 "Year 1993-2021"
 ]
}

 The dataset includes 7822 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202583-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fvxkpk
title: Occurrence Download

description: A dataset containing 1530 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callicebus Thomas, 1903",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Material sample"
 ]
 }
 ]
}

 The dataset includes 1530 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000514-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r8rv77
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Disa procera H.P.Linder"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178470-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7tb45h
title: Occurrence Download

description: A dataset containing 695 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cynomys Rafinesque, 1817",
 "Year 2020-2021"
 ]
}

 The dataset includes 695 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202587-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kddhkx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Quercus",
 "BasisOfRecord is Human Observation",
 "HasCoordinate is True"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202619-200613084148143/datasets/export for details.
DOI: 10.15468/dl.pw3mmw
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Disa purpurascens Bolus"
 ]
}

 The dataset includes 159 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178481-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8k7iq
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sorghum bulbosum Lazarides"
 ]
}

 The dataset includes 88 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000514-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c4ytcq
title: Occurrence Download

description: A dataset containing 503 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asclepias tuberosa L.",
 "BasisOfRecord is Human Observation",
 "HasCoordinate is True",
 "DecimalLongitude is greater than -87.9",
 "DecimalLongitude is less than -79.9",
 "DecimalLatitude is greater than 24.2",
 "DecimalLatitude is less than 31.1"
 ]
}

 The dataset includes 503 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202706-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkqqci
title: Occurrence Download

description: A dataset containing 5696 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Narcomedusae"
 ]
}

 The dataset includes 5696 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000514-170816103707345/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.39dmmy
title: Occurrence Download

description: A dataset containing 261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((108.41198 21.86678,109.28889 21.86678,109.28889 22.66521,108.41198 22.66521,108.41198 21.86678))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 261 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178482-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gyahv5
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prescottia congesta Pupulin"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0184207-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qe3gep
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mompha decorella Stephens, 1835",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 {
 "or" : [
 "Country is Poland",
 "Country is Poland"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0394007-210914110416597/datasets/export for details.
DOI: 10.15468/dl.xpcohj
title: Occurrence Download

description: A dataset containing 688 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Ditrichum pusillum (Hedw.) Hampe",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 688 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000514-170817152713382/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ayd8k4
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chrysopsis floridana Small",
 "BasisOfRecord is Human Observation",
 "HasCoordinate is True",
 "DecimalLongitude is greater than -87.9",
 "DecimalLongitude is less than -79.9",
 "DecimalLatitude is greater than 24.2",
 "DecimalLatitude is less than 31.1"
 ]
}

 The dataset includes 35 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202719-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pdm9f9
title: Occurrence Download

description: A dataset containing 631 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-92.66853 -1.07107,-57.33147 -1.07107,-57.33147 13.07107,-92.66853 13.07107,-92.66853 -1.07107))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ortalis columbiana Hellmayr, 1906",
 "Year 2005-2010"
 ]
}

 The dataset includes 631 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178475-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ieqziz
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Aeonium gomerense (Praeger) Praeger"
 ]
}

 The dataset includes 35 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000514-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.twut43
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Garcinia mangostana var. borneensis Nazre"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178492-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.