cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/cs7df-3jg61
title: U2OS-Tubulin Tracker Green

description: U2OS cells stained with tubulin tracker to locatemidbodies using LM. Cryo-FIB milling is used to make the sample thinner.
description: <strong>Tilt Series Date:</strong> 2017-07-14</p>
<strong>Data Taken By:</strong> Wei Zhao</p>
<strong>Species / Specimen:</strong> U2OS</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-62.0°, 62.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD-patch tracking</p>
<strong>Purification / Growth Conditions / Treatment:</strong> U2OS cells grown on Au finder grids for 28-48 hours.Grids coated with PL.</p>
<strong>Sample Preparation:</strong> Cells were stained with tubulin tracker and Hoechst before freezing. Plunge frozen using the vitrobot III blotted manually from back(drain time 1s).</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-07-14-1/rawdata/</p>TS9.mrc,  Tilt Series (Pixel Size 0.4569 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-07-14-1/rawdata/TS9.mrc"
        > <i class="download icon"></i> Download </a></p>

        TS9_bin2.rec,  Reconstruction (Pixel Size 0.0 nm), 187.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-07-14-1/3dimage_86873/TS9_bin2.rec"
        > <i class="download icon"></i> Download </a></p>

        wza2017-07-14-1_slicer18626.png,  mitochondrion and lysosome, 1.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/wza2017-07-14-1_slicer18626.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yxf76-xj227
title: Starving E-coli (cbpA- knockout)

description: keywords: late stage stationary phase, starvation, MC105 cbpA-
description: <strong>Tilt Series Date:</strong> 2015-08-12</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strains prepared by James Haycocks in the David Grainger Lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown in LB broth at 33 degrees while shaken at 400 rpm for 11 days</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-08-12-11/3dimage_60381/</p>cbpAminustomogramAugust0001_part121_23.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-08-12-11/3dimage_60381/cbpAminustomogramAugust0001_part121_23.rec"
        > <i class="download icon"></i> Download </a></p>

        cbpAminustomogramAugust0001.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-08-12-11/rawdata/cbpAminustomogramAugust0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        aba2015-08-12-11_slicer14161.png,  unhappy-inner-membrane, 563.6 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/aba2015-08-12-11_slicer14161.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/asnpc-m8r71
title: HeLa cells expressing TRIM5α-YFP

description: 4 hours incubation MG-132 (0.4 ul) 1 μg/ml.
description: <strong>Tilt Series Date:</strong> 2016-05-05</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Hela cells expressing TRIM5a-YFP</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Tom Hope</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown on R2/2 London finder grids coated with fibronectin</p>
<strong>Sample Preparation:</strong> Manual Blotting</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-2/rawdata/</p>tomography10.mrc,  Tilt Series (Pixel Size 6.167 nm), 3.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-2/rawdata/tomography10.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography10.rec,  Reconstruction (Pixel Size 24.668 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-2/3dimage_118358/tomography10.rec"
        > <i class="download icon"></i> Download </a></p>

        tomography10controlsecondnewnew_full.rec,  Reconstruction (Pixel Size 0.0 nm), 533.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-2/3dimage_118469/tomography10controlsecondnewnew_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/2djch-pr609
title: Cos7 cells

description: Looking for midbodies or Tunelling nanotubes
description: <strong>Tilt Series Date:</strong> 2015-03-05</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Cos7</p>
<strong>Strain:</strong> Cos7 cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSF TOMO</p>
<strong>Sample Preparation:</strong> Synchronized cells with Thymidine 2mM. Frozen after 14 hours of washing.</p>
  rra2015-03-05-1_slicer12803.jpg: ESCRT repeating units? rra2015-03-05-1_slicer12804.jpg: Thinner filaments rra2015-03-05-1_slicer12807.jpg: Repeating units in ESCRT(?) filament.. spacing- 3 nm rra2015-03-05-1_slicer12808.jpg: Thin filaments around midbody
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-03-05-1/rawdata/</p>atlas10001.mrc,  Tilt Series (Pixel Size 0.5 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-03-05-1/rawdata/atlas10001.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10001_part81_2.rec,  Reconstruction (Pixel Size 2.0 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-03-05-1/3dimage_52595/atlas10001_part81_2.rec"
        > <i class="download icon"></i> Download </a></p>

        atlas10001new.st_full.rec,  Reconstruction (Pixel Size 0.0 nm), 311.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2015-03-05-1/3dimage_53091/atlas10001new.st_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bd6t2-pnk03
title: Staphylococcus aureus_WT

description: T7SS
description: <strong>Tilt Series Date:</strong> 2017-06-28</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 1.5°, constant angular increment, dosage: 280.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Tracy Palmer, University of Dundee. Data collected and processed by Ki Woo and Debnath Ghosal.</p>
<strong>Sample Preparation:</strong> Media: TSA 500g (Oxoid TSA and TSB from Thermo Fisher. 10525943), TBS 500g (10137562)Dilute an overnight culture 1/100Incubate it for 4 hr (--> OD 2)Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-06-28-25/rawdata/</p>Sau_WT0024.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-06-28-25/rawdata/Sau_WT0024.mrc"
        > <i class="download icon"></i> Download </a></p>

        Sau_WT0024_full.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-06-28-25/3dimage_85406/Sau_WT0024_full.rec"
        > <i class="download icon"></i> Download </a></p>

        dga2017-06-28-25_slicer18620.png, , 862.9 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/dga2017-06-28-25_slicer18620.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wyvvs-frp98
title: Hela-cryoFIB

description: Raw data files of Hela-cryoFIB
description: <strong>Tilt Series Date:</strong> 2017-03-27</p>
<strong>Data Taken By:</strong> Wei Zhao</p>
<strong>Species / Specimen:</strong> HeLa cells</p>
<strong>Strain:</strong> ATCC</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Hela cells grown on Au finder grids for 28-48 hours.Grids coated with PL.</p>
<strong>Sample Preparation:</strong> Sample Preparation:  Cells were plunge frozen using the vitrobot III blotted manually from back(drain time 1s).</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-03-27-1/rawdata/</p>TS10.mrc,  Tilt Series (Pixel Size 0.372 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-03-27-1/rawdata/TS10.mrc"
        > <i class="download icon"></i> Download </a></p>

        TS1_4bin_full.rec,  Reconstruction (Pixel Size 0.0 nm), 32.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-03-27-1/3dimage_92885/TS1_4bin_full.rec"
        > <i class="download icon"></i> Download </a></p>

        TS1_4bin_sirt16_flipint.rec,  Reconstruction (Pixel Size 0.0 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2017-03-27-1/3dimage_92886/TS1_4bin_sirt16_flipint.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/k6xve-45j72
title: Adipocyte Cell

description: FGF21Dose-symmetrical dose scheme
description: <strong>Tilt Series Date:</strong> 2017-11-30</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Primary adipocyte cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 50000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Roger Kornberg and Maia</p>
<strong>Purification / Growth Conditions / Treatment:</strong> https://elifesciences.org/articles/43146#s4</p>
<strong>Sample Preparation:</strong> https://elifesciences.org/articles/43146#s4</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-29/rawdata/</p>tomo001_orig.mrc,  Tilt Series (Pixel Size 2.241 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-29/rawdata/tomo001_orig.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomo001_orig.rec,  Reconstruction (Pixel Size 8.964 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-29/3dimage_117275/tomo001_orig.rec"
        > <i class="download icon"></i> Download </a></p>

        tomo001_sorted_full.rec,  Reconstruction (Pixel Size 0.0 nm), 668.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-11-30-29/3dimage_118710/tomo001_sorted_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.2pvd75
title: Occurrence Download

description: A dataset containing 810 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sorbus pohuashanensis"
 ]
}

 The dataset includes 810 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046632-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/pewbp-z1619
title: HeLa cells expressing TRIM5α-YFP

description: 4 hours incubation MG-132 (0.4 ul) 1 μg/ml.
description: <strong>Tilt Series Date:</strong> 2016-05-05</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Hela cells expressing TRIM5a-YFP</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Tom Hope</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown on R2/2 London finder grids coated with fibronectin</p>
<strong>Sample Preparation:</strong> Manual Blotting</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-5/rawdata/</p>tomography5.mrc,  Tilt Series (Pixel Size 6.167 nm), 3.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-5/rawdata/tomography5.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography5.rec,  Reconstruction (Pixel Size 24.668 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-5/3dimage_118362/tomography5.rec"
        > <i class="download icon"></i> Download </a></p>

        tomographynewstack_full.rec,  Reconstruction (Pixel Size 0.0 nm), 668.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-05-05-5/3dimage_118472/tomographynewstack_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/pbdtt-57334
title: cryo-FIB INS-1E

description: Overexpressing PIS-GFP
description: <strong>Tilt Series Date:</strong> 2017-01-16</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Rat INS-1E pancreatic beta cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> None</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Zach Freyberg</p>
<strong>Purification / Growth Conditions / Treatment:</strong> https://advances.sciencemag.org/content/6/14/eaay9572/tab-figures-data</p>
<strong>Sample Preparation:</strong> Manual Blotting</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-5/rawdata/</p>tomography4.mrc,  Tilt Series (Pixel Size 6.328 nm), 3.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-5/rawdata/tomography4.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography4_full.rec,  Reconstruction (Pixel Size 0.0 nm), 668.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-5/3dimage_118463/tomography4_full.rec"
        > <i class="download icon"></i> Download </a></p>

        tomography4_fullsirt.rec,  Reconstruction (Pixel Size 0.0 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-5/3dimage_118464/tomography4_fullsirt.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.e8xfh3
title: Occurrence Download

description: A dataset containing 3081 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acer negundo",
 "Country is Italy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3081 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046633-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/0g0yt-nxx89
title: Rhesus TRIM5α decorated HIV-1

description: Non infectious hyperstable HIV-1 cores decorated with Rhesus TRIM5α. 0.3 µM sulfo-EGS. Cores were heavily coated.
description: <strong>Tilt Series Date:</strong> 2015-06-14</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> HIV cores</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 90.0 eV/Å²,  defocus: -5.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Wes Sunquist, Barbie Ganser-Pornillos</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Yen-Li (Wes Sundquist Lab)</p>
<strong>Sample Preparation:</strong> Quantifoil 300 mesh R2/2</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-06-14-18/rawdata/</p>tomographycores0018.mrc,  Tilt Series (Pixel Size 2.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-06-14-18/rawdata/tomographycores0018.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomographycores0018.rec,  Reconstruction (Pixel Size 10.4 nm), 890.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-06-14-18/3dimage_58303/tomographycores0018.rec"
        > <i class="download icon"></i> Download </a></p>

        tomographycores0018_orig_full.rec,  Reconstruction (Pixel Size 0.0 nm), 533.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-06-14-18/3dimage_76037/tomographycores0018_orig_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6dkjy-2gx24
title: Nitrosocaldus yellowstonensis

description: Raw data files of Nitrosocaldus yellowstonensis
description: <strong>Tilt Series Date:</strong> 2019-07-15</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Candidatus Nitrosocaldus yellowstonensis</p>
<strong>Strain:</strong> HL72</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Jose R De La Torre and students, SF state, culture growth</p>
<strong>Purification / Growth Conditions / Treatment:</strong> stationary phase</p>
<strong>Sample Preparation:</strong> Quantifoil R0.6/1 copper 300 mesh, 10nm gold, 22deg C, 100% humidity, manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-07-15-18/rawdata/</p>20190715_Ny_stationary_4.mrc,  Tilt Series (Pixel Size 0.2678 nm), 1.2 GB  
        
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        20190715_Ny_stationary_4_full.rec,  Reconstruction (Pixel Size 1.0712 nm), 737.3 MB  
        
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        20190715_Ny_stationary_4.mrc.mdoc,  13.3 kB  
        
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