cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.bfw3ib
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Craseonycteridae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019840-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkfdnh
title: Occurrence Download

description: A dataset containing 8561 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Echimyidae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8561 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021329-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/v01-m82-n5l
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/80t-ms7-f86
title: Trisopterus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rqe-pq2-n52
title: †Paraspirifer Wedekind, 1926

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/26m-4s6-hyl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a2n-5px-wa6
title: Trisopterus capelanus (Lacepède, 1800)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1qf-hjk-ma3
title: †Coryphostoma incrassatum (Reuss, 1851)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5z7-pat-26e
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/62m-an8-kjk
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/282-b0f-6rw
title: Ursus arctos Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5xh-bef-5k9
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d3s-6zl-tql
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x63-35n-5l4
title: Lamna

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1zn-835-3fm
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rj2-hxq-r04
title: Stenarcestes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c1b-nf0-32q
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/597-12a-h0e
title: Sus scrofa Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pxx-zvs-ynk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2nr-65a-esm
title: †Cibicidoides voltzianus (d'Orbigny, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ghz-6cf-97e
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4zw-veb-zl5
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m8c-n7t-5bj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bjn-08j-nxb
title: †Spirifer Sowerby, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k76-gbt-d3e
title: †Siderolites calcitrapoides Lamarck, 1801

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0q3-dbp-9sf
title: Siphonina bradyana Cushman, 1927

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mt5-1zg-r6w
title: Recurvoides Earland, 1934

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r3e-6cx-yf9
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xj5-mnx-n7g
title: †Rhynchonella Fischer de Waldheim, 1809

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/08h-zq9-sw7
title: Cetacea Brisson, 1762

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l7x-mzh-vpj
title: Lethrinus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.aet9j5
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rottboellia cochinchinensis",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 56 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023312-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/97d-nmb-5ad
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jt0-1gx-56l
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ytx-2ka-4kh
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hp3-le4-78b
title: Sigmomorphina semitecta (Reuss, 1867)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/beq-qlq-kwr
title: Dama dama mesopotamica (Brooke, 1875)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hdy-p8l-24w
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4r6-zsm-d3g
title: Dama dama mesopotamica (Brooke, 1875)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lhb-497-t31
title: Testudo

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v9n-pja-fpq
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vrr-vm7-8sx
title: †Reophax horridus (Schwager, 1865)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/91b-54v-f6b
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.t4xmnh
title: Occurrence Download

description: A dataset containing 44689 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Potentilla crantzii (Crantz) Beck ex Fritsch",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 44689 records from 325 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000173-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15276611
title: Brieflow Small Test Data

description: Small test data for Brieflow!
DOI: 10.5281/zenodo.15276612
title: Brieflow Small Test Data

description: Small test data for Brieflow!
DOI: 10.15468/dl.fa472m
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lycium barbarum",
 "Country is Slovakia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 92 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085296-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xbkhu6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bactrocera dorsalis",
 "Country is Central African Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085299-250717081556266/datasets/export for details.
DOI: 10.15468/dl.94bpb8
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Datura metel",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085297-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jpcdys
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bactrocera dorsalis",
 "Country is Cabo Verde",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085298-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15442887
title: Dataset from: When to cryopreserve and when to let it go? A systematic review of priorities in wild animal cryobanking

description: 1.      Summary

This dataset is the output from a systematic review entitled "When to cryopreserve and when to let it go? A systematic review of priorities in wild animal cryobanking" which was published in Theriogenology Wild in January 2025. The dataset consists of the stated species and cell type (e.g. sperm, oocyte, somatic cell) priorities highlighted in papers that focused on wildlife and domestic animal biobanking. The papers were collected using the PRISMA search protocol, through three search engines; Web of Science, Scopus, and Google Scholar, for a search period from 1 January 1970 to 1 June 2023. The following Boolean string was used to identify papers: 

(cryo* OR frozen OR bank* OR genom*) AND (priori* OR strateg* OR sample-selection OR advance* OR program* OR collection) AND (conservation OR biodiversity) AND (animal OR wild* OR zoo OR aqua*) NOT plant.

Some papers features twice in the dataset if they contained multiple, separate studies.

 

2.      Description of the dataset

The raw data can be found as a single .csv file. The data columns are as follows:

Number: An unique number for each publication inputted into the spreadsheet. If a publication contained multiple studies, each study has its own row in the spreadsheet, but the publication number is the same.

Year: Year that the paper was published.

First author: The surname of the lead author

Last author: The surname of the last author

Lead affiliation: The organisation noted as the affiliation for the lead author.#

Journal: The journal that the paper was published in.

Paper name: The name of the publication.

Within a species or between species: Did the publication focus on prioritisation methods within a single species population (e.g. genetic diversity, founder representation), or between species (e.g. endangered species, taxonomic uniqueness)?

Strategy: The stated strategy for prioritising species or individuals for biobanking.

Number of samples: The number of samples recommended to be collected per species for biobanking.

Number of individuals: The number of individual animals recommended to be represented per species for biobanking.

Animal: The species or taxonomic group being discussed.

Field: The industry type that the publication focused on (e.g. wildlife, agriculture)

Class: The taxonomic class for the priority taxon.

Order: The taxonomic order for the priority taxon.

Family: The taxonomic family for the priority taxon.

Genus: The taxonomic genus for the priority taxon.

(Sub)species: The taxonomic species (and subspecies) for the priority taxon.

Sperm/ Oocyte/ Embryo / Larva/ Epididymal sperm / Ovarian tissue/ Somatic cell/ iPSC/ ESC/ PGC/ Blood: Did the publication highlight this tissue type as a priority for biobanking? A Y denotes that this was highlighted as a priority. A publication could highlight multiple tissue types as priorities.
DOI: 10.5281/zenodo.15442888
title: Dataset from: When to cryopreserve and when to let it go? A systematic review of priorities in wild animal cryobanking

description: 1.      Summary

This dataset is the output from a systematic review entitled "When to cryopreserve and when to let it go? A systematic review of priorities in wild animal cryobanking" which was published in Theriogenology Wild in January 2025. The dataset consists of the stated species and cell type (e.g. sperm, oocyte, somatic cell) priorities highlighted in papers that focused on wildlife and domestic animal biobanking. The papers were collected using the PRISMA search protocol, through three search engines; Web of Science, Scopus, and Google Scholar, for a search period from 1 January 1970 to 1 June 2023. The following Boolean string was used to identify papers: 

(cryo* OR frozen OR bank* OR genom*) AND (priori* OR strateg* OR sample-selection OR advance* OR program* OR collection) AND (conservation OR biodiversity) AND (animal OR wild* OR zoo OR aqua*) NOT plant.

Some papers features twice in the dataset if they contained multiple, separate studies.

 

2.      Description of the dataset

The raw data can be found as a single .csv file. The data columns are as follows:

Number: An unique number for each publication inputted into the spreadsheet. If a publication contained multiple studies, each study has its own row in the spreadsheet, but the publication number is the same.

Year: Year that the paper was published.

First author: The surname of the lead author

Last author: The surname of the last author

Lead affiliation: The organisation noted as the affiliation for the lead author.#

Journal: The journal that the paper was published in.

Paper name: The name of the publication.

Within a species or between species: Did the publication focus on prioritisation methods within a single species population (e.g. genetic diversity, founder representation), or between species (e.g. endangered species, taxonomic uniqueness)?

Strategy: The stated strategy for prioritising species or individuals for biobanking.

Number of samples: The number of samples recommended to be collected per species for biobanking.

Number of individuals: The number of individual animals recommended to be represented per species for biobanking.

Animal: The species or taxonomic group being discussed.

Field: The industry type that the publication focused on (e.g. wildlife, agriculture)

Class: The taxonomic class for the priority taxon.

Order: The taxonomic order for the priority taxon.

Family: The taxonomic family for the priority taxon.

Genus: The taxonomic genus for the priority taxon.

(Sub)species: The taxonomic species (and subspecies) for the priority taxon.

Sperm/ Oocyte/ Embryo / Larva/ Epididymal sperm / Ovarian tissue/ Somatic cell/ iPSC/ ESC/ PGC/ Blood: Did the publication highlight this tissue type as a priority for biobanking? A Y denotes that this was highlighted as a priority. A publication could highlight multiple tissue types as priorities.
DOI: 10.15468/dl.e6h9ka
title: Occurrence Download

description: A dataset containing 583575 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "GadmGid is MEX.19_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 583575 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002022-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7s6t4n
title: Occurrence Download

description: A dataset containing 888 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudaulacaspis pentagona (Targioni Tozzetti, 1886)"
 ]
}

 The dataset includes 888 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010994-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29176160
title: Integrating Tshivenda Proverbs in the classroom: Enhancing Language Learning and Cultural Awareness

description: This is a dataset for an article titled "Integrating Tshivenda Proverbs in the classroom: Enhancing language learning and cultural awareness
DOI: 10.5281/zenodo.18237474
title: Blechnum x leopoldense (Dutra) V.A.O.Dittrich & Salino. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:32
DOI: 10.5281/zenodo.18237475
title: Blechnum x leopoldense (Dutra) V.A.O.Dittrich & Salino. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:32
DOI: 10.3886/e243978
title: Rates of TBI-related Emergency Department Visits, Hospitalizations, and Deaths by Sex - United States, 2001 – 2010

description: Overall rates of TBI climbed slowly from 2001 through 2007, then spiked sharply in 2008 and continued to climb through 2010. The increase in TBI rates in 2008 was much sharper for men (nearly 40% increase) than for women (20% increase). In 2007, overall rates of TBI were 26% higher in men compared to women. In 2008, that gap began to widen, reaching 61% in 2009 before narrowing to 29% in 2010. Rates of overall TBI are largely driven by rates of TBI-related ED visits.
Read less
description: (Downloaded 1/12/2026)
DOI: 10.3886/e243978v1
title: Rates of TBI-related Emergency Department Visits, Hospitalizations, and Deaths by Sex - United States, 2001 – 2010

description: Overall rates of TBI climbed slowly from 2001 through 2007, then spiked sharply in 2008 and continued to climb through 2010. The increase in TBI rates in 2008 was much sharper for men (nearly 40% increase) than for women (20% increase). In 2007, overall rates of TBI were 26% higher in men compared to women. In 2008, that gap began to widen, reaching 61% in 2009 before narrowing to 29% in 2010. Rates of overall TBI are largely driven by rates of TBI-related ED visits.
Read less
description: (Downloaded 1/12/2026)
DOI: 10.5281/zenodo.15549739
title: Information Ontology (IO) archive 2/2

description: Existing information ontology (IO) archive, precursor to autaxys, part 1 of 2 as of publication date.
DOI: 10.5281/zenodo.15549740
title: Information Ontology (IO) archive 2/2

description: Existing information ontology (IO) archive, precursor to autaxys, part 1 of 2 as of publication date.
DOI: 10.5281/zenodo.15549751
title: FIShBOT Archive 2025-05-30

description: This dataset is a static snapshot of the FIShBOT data product before new data are aggregated. This version of fishbot is archived for reproducibility and is not updated. The data are aggregated from the FIShBOT system, which collects and processes oceanographic from fishery dependent and independent sources.
DOI: 10.5281/zenodo.15549752
title: FIShBOT Archive 2025-05-30

description: This dataset is a static snapshot of the FIShBOT data product before new data are aggregated. This version of fishbot is archived for reproducibility and is not updated. The data are aggregated from the FIShBOT system, which collects and processes oceanographic from fishery dependent and independent sources.
DOI: 10.15468/dl.7dkut5
title: Occurrence Download

description: A dataset containing 32159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Afghanistan",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 32159 records from 201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027486-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57841/casdc.0005479
title: 番茄转录组及相关数据集
DOI: 10.15468/dl.af3e5u
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Living Specimen, Specimen)",
 "Continent is South America",
 "Country is Colombia",
 "TaxonKey is Atractus pamplonensis Amaral, 1937",
 "Year 2000-2025"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027487-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jyr2wb
title: Occurrence Download

description: A dataset containing 473 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sceloporus bicanthalis Smith, 1937"
 ]
}

 The dataset includes 473 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027488-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pgp5rc
title: Occurrence Download

description: A dataset containing 62947 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Living Specimen, Occurrence evidence, Material sample, Human Observation)",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year 1978-1998"
 ]
}

 The dataset includes 62947 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027460-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15319167
title: RNASSTR

description: This repository contains the RNASSTR dataset described in our recent manuscript:

 

Langeberg, C. J., Kim, T., Nagle, R., Meredith, C., Garuadapuri, D. A., Doudna, J. A., & Cate, J. H. (2025). Improving RNA Secondary Structure Prediction Through Expanded Training Data. bioRxiv, 2025-05.