cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25204958.v1
title: Fruit and seed set.csv

description: <b>PREMISE OF THE STUDY: </b>On islands, flowering plants tend to be more generalist in their pollination needs, as insects (the main pollinators of flowering plants) are under-represented in these ecosystems compared to the mainland. In addition, some vertebrate species that are typically insectivorous or granivorous on the mainland are forced to broaden their diet and consume other resources such as nectar or pollen on the islands. The shrub Malva arborea L., with its large and colourful flowers, attracts different groups of potential pollinators. This study aimed to compare the effectiveness of vertebrates vs insects in an insular population of M. arborea and to investigate its reproductive system.<b>METHODS:</b> For three groups of taxa (insects, birds and lizards), we assessed the two components of pollination effectiveness: (i) the quantitative component (i.e. number of visits and number of flower contacted) through direct observations of flowers; and (ii) the qualitative component (fruit and seed set, number and size of seeds, and proportion of seedling emergence) through pollinator exclusion experiments.<b>KEY RESULTS:</b> Vertebrates (birds and lizards) were quantitatively the most effective pollinators, followed by insects. However, when all three groups visited the flowers, fruit and seed set were higher than when any of them were excluded. We also found that M. arborea has hermaphrodite flowers and is able to reproduce by autogamy, although less efficiently than when pollinated by animals.<b>CONCLUSIONS:</b> Both, vertebrates and insects play an important role in the reproduction of M. arborea. Although the plant does not need pollinators to produce seeds, its reproductive success increases when all pollinators are allowed to visit the flowers. Besides providing new information on M. arborea, these findings may help to better understand the role of different pollinator groups in the reproduction of other plant species, especially on islands where the co-occurrence of vertebrate and invertebrate pollination in the same plant species is usual.
DOI: 10.6084/m9.figshare.25305199.v1
title: Abstracts for scoping review on automated fact-checking

description: This dataset is curated for a scoping literature review focusing on automated fact-checking. It comprises metadata extracted from 338 papers sourced from 10 databases, all centered around automated information verification. Following inclusion and exclusion criteria, 199 abstracts were chosen for subsequent disciplinary and thematic analysis.
DOI: 10.6084/m9.figshare.25702779.v1
title: MPOX - Supplementary table 5

description: MPXV sequencing by LRS and CAGE-Seq
DOI: 10.6084/m9.figshare.14940744.v1
title: Climate change and liveability of cities (Responses).xlsx

description: This file contains data responses on climate change and liveability of cities.
DOI: 10.25850/nioz/7b.b.rj
title: Mineralization of photodegraded polyethylene by the marine-derived fungus Aspergillus terreus

description: The microbial processes and kinetics involved in plastic biodegradation in marine environments remain largely unexplored. In particular, the role of marine fungi in this context is largely unconstrained. In this study, we incubated the marine-derived fungus Aspergillus terreus in microcosms with 13C-labelled polyethylene (PE) to trace mineralization and assimilation of plastic-derived carbon. Our assays provide evidence that A. terreus mineralizes UV-treated PE. Over the 22-day period of incubation, fungal-mediated mineralization of photodegraded PE amounted to 0.24% of the initially added PE. NanoSIMS imaging and isotopic analysis of fatty acids demonstrated the limited incorporation of UV-treated PE-derived carbon into fungal biomass. In contrast, incubations with A. terreus and untreated PE for up to 102 days showed no measurable evidence of biotic degradation. These findings underscore the critical role of photodegradation in facilitating subsequent biotic degradation of PE by A. terreus in marine environments.
DOI: 10.6084/m9.figshare.22575376.v1
title: Developing Human Cortex RNA Data

description: Developing human cortex RNA data used in the Figure 6 notebook.
DOI: 10.6084/m9.figshare.27649653.v1
title: Alignments and ML phylogenies of DNA barcodes of 1496 Asian fern samples.

description: Alignments in phylip and tree in newick formats
DOI: 10.6084/m9.figshare.20285955.v1
title: Supplementary Material for: Lectin Pathway Enzyme MASP-2 and Downstream Complement Activation in COVID-19

description: Mannose-binding lectin-associated serine protease 2 (MASP-2) is the main activator of the lectin complement pathway and has been suggested to be involved in the pathophysiology of coronavirus disease 2019 (COVID-19). To study a possible association between MASP-2 and COVID-19, we aimed at developing a sensitive and reliable MASP-2 ELISA. From an array of novel mouse-monoclonal antibodies using recombinant MASP-2 as antigen, two clones were selected to create a sandwich ELISA. Plasma samples were obtained from 216 healthy controls, 347 convalescent COVID-19 patients, and 147 prospectively followed COVID-19 patients. The assay was specific towards MASP-2 and did not recognize the truncated <i>MASP2</i> splice variant MAP-2 (MAp19). The limit of quantification was shown to be 0.1 ng/mL. MASP-2 concentration was found to be stable after multiple freeze-thaw cycles. In healthy controls, the mean MASP-2 concentration was 524 ng/mL (95% CI: 496.5–551.6). No significant difference was found in the MASP-2 concentrations between COVID-19 convalescent samples and controls. However, a significant increase was observed in prospectively followed COVID-19 patients (mean: 834 ng/mL [95% CI: 765.3–902.7, <i>p</i> &lt; 0.0001]). In these patients, MASP-2 concentration correlated significantly with the concentrations of the terminal complement complex (ρ = 0.3596, <i>p</i> &lt; 0.0001), with the lectin pathway pattern recognition molecules ficolin-2 (ρ = 0.2906, <i>p</i> = 0.0004) and ficolin-3 (ρ = 0.3952, <i>p</i> &lt; 0.0001) and with C-reactive protein (ρ = 0.3292, <i>p</i> = 0.0002). Overall, we developed a specific quantitative MASP-2 sandwich ELISA. MASP-2 correlated with complement activation and inflammatory markers in COVID-19 patients, underscoring a possible role of MASP-2 in COVID-19 pathophysiology.
DOI: 10.6084/m9.figshare.23666733.v1
title: Supplementary Material for: A meta-analysis of neurodevelopmental outcomes following intravitreal bevacizumab for the treatment of retinopathy of prematurity

description: Background: Retinopathy of prematurity (ROP) is the most common cause of preventable blindness in preterm infants. First-line treatments include intravitreal bevacizumab (IVB) or laser photocoagulation (LPC). Objectives: To evaluate neurodevelopmental safety of IVB compared to LPC for ROP. Methods: MEDLINE, EMBASE and Cochrane were searched up to September 2022. Studies were included with at least 12-month follow-up of primary outcomes such as severe neurodevelopmental impairment (sNDI), cerebral palsy (CP), and hearing impairment (HI). Secondary outcomes were moderate-to-severe impairment (msNDI), Bayley Scores of Infant Development (BSID-III) and visual impairment. Results: 1231 patients from 11 comparative studies were included. Quality of evidence was rated low for all outcomes. IVB was associated with a higher risk for sNDI (risk ratio [RR]=1.25, 95% confidence interval [CI] 1.01, 1.53, P=0.04) and CP (RR=1.40, CI [1.08, 1.81], P=0.01) compared to LPC. There was no significant difference between IVB and LPC for msNDI (RR=1.15, CI [0.98, 1.35], P=0.08) and HI (RR=1.43, CI [0.86, 2.39], P=0.17). BSID-III percentile scores were similar between IVB and LPC, with weighted mean differences of 1.51 [CI=-1.25, 4.27], 2.43 [CI=-1.36, 6.22] and 1.97 [CI=-1.06, 5.01] for cognitive, language, and motor domains, respectively (P&gt;0.05). Conclusion: To our knowledge, this is the largest meta-analysis on neurodevelopmental outcomes and the first to rigorously examine IVB monotherapy in ROP treatment. Compared to LPC, there was a marginally increased risk for sNDI and CP with IVB but little or no difference in the risk of msNDI and HI. Further randomized studies are needed to strengthen these findings.
DOI: 10.6084/m9.figshare.20300235.v1
title: Genotype Data.xlsx

description: This is data of five genetic mutations. we have done genotyping of five variants for different genes related to cardiovascular sysytem.
DOI: 10.6084/m9.figshare.27231786.v1
title: <b>Knowledge and Attitude Toward Preeclampsia Among Women in Al-Kharj, Saudi Arabia</b><b>:</b><b> A Cross-sectional Study</b>

description: This file is the datasheet from which the results and conclusion of the study are curated.
DOI: 10.6084/m9.figshare.25573854.v1
title: Supplementary Material for: Systemic co-administration of low dose oxytocin and glucagon like peptide-1 additively decreases food intake and body weight

description: Introduction: GLP-1 receptor agonists are the number one drug prescribed for the treatment of obesity and type 2 diabetes. These drugs are not, however, without side-effects and in an effort to maximize therapeutic effect while minimizing adverse effects, gut hormone co-agonists received considerable attention as new drug targets in the fight against obesity. Numerous previous reports identified the neuropeptide oxytocin (OXT) as a promising anti-obesity drug. The aim of this study is to evaluate OXT as a possible co-agonist for GLP-1 and examine the effects of its co-administration on food intake (FI) and body weight (BW) in mice. Methods: FI and c-Fos levels were measured in the feeding-centers of the brain in response to an intraperitoneal injection of saline, OXT, GLP-1 or OXT/GLP-1. The action potential frequency and cytosolic Ca2+ ([Ca2+]i) in response to OXT, GLP-1 or OXT/GLP-1were measured in ex-vivo PVN neuronal cultures. Finally, FI and BW changes were compared in diet induced obese mice treated with saline, OXT, GLP-1 or OXT/GLP-1 for 13 days. Results: Single injection of OXT/GLP-1 additively decreased FI, and increased c-Fos expression specifically in the paraventricular (PVN) and supraoptic nucleus (SON). 70% of GLP-1 receptor positive neurons in the PVN also expressed OXT receptors, and OXT/GLP-1 co-administration dramatically increased firing and [Ca2+]i in the PVN OXT neurons. The chronic OXT/GLP-1 co-administration decreased BW without changing FI. Conclusion: Chronic OXT/GLP-1 co-administration decreases BW, possibly via the activation of PVN OXT neurons. OXT might be a promising candidate as an incretin co-agonist in obesity treatment.
DOI: 10.17870/bathspa.13242047.v1
title: Appendix P - 'Of Life as a Book' Creative work - Using Creative Writing to Explore Identity Formation: A Participatory Study with Adolescents in Post-Conflict Colombia (PhD Thesis)

description: This document has been uploaded as an appendix for the thesis, <i>Using Creative Writing to Explore Identity Formation: A Participatory Study with Adolescents in Post-Conflict Colombia</i>.<br><br>This item contains the creative work, <i>Of Life as a Book</i>, produced by the participants in the study. <br>The open access version deposited here is redacted where necessary to exclude material under copyright and to protect personal details.<br>Where images are used with the artist's permission in this document, they are otherwise protected by copyright law and may not be used or distributed for any other purpose without the direct written permission of the artist.
DOI: 10.6084/m9.figshare.14685429.v1
title: Comparative survival analyses among captive chimpanzees (Pan troglodytes) in America and Japan

description: Data and analysis code to accompany the manuscript by Judy P. Che-Castaldo, Kristin Havercamp, Koshiro Watanuki, Tetsuro Matsuzawa, Satoshi Hirata, Stephen R. Ross<br><br>1. AZAchimpsurvdat_pub.csv - anonymized individual-level survival data for AZA population<br>2. Japanchimpsurvdat_pub.csv - anonymized individual level survival data for Japan population<br>3. wildCompare.csv - age-specific survival rates (lx) from birth for AZA and Japan population, as well as for one wild population from Gombe, Tanzania<br>4. wildCompareAge1.csv - age-specific survival rates (lx) from age 1 for AZA and Japan population, as well as for one wild population from Gombe, Tanzania<br>5. chimp_survival_publish.R - R code using the above datasets to create the analyses and figures presented in manuscript<br><br>
DOI: 10.6084/m9.figshare.3551079.v1
title: Appendix B. Topological network measures that have been applied to quantify connectivity in habitat networks.

description: Topological network measures that have been applied to quantify connectivity in habitat networks.
DOI: 10.6084/m9.figshare.11761839.v1
title: Supplementary Material for: Reliability of Home Nocturnal Oximetry in the Diagnosis of Overlap Syndrome in COPD

description: <b><i>Background:</i></b> Chronic obstructive pulmonary disease (COPD) and sleep apnea are common conditions and often coexist. The proper diagnosis of sleep apnea may affect the management and outcome of patients with COPD. <b><i>Objective:</i></b> To determine the accuracy of home nocturnal oximetry to distinguish between nocturnal oxygen desaturation related to COPD alone or to sleep apnea in patients with moderate-to-severe COPD who have significant nocturnal hypoxemia with cyclical changes in saturation. <b><i>Methods:</i></b> This study involved a comparison of home nocturnal oximetry and laboratory-based polysomnography (PSG) in patients with moderate-to-severe COPD considered for inclusion in a trial of nocturnal oxygen therapy. All of the patients had significant nocturnal oxygen desaturation (defined as ≥30% of the recording time with a transcutaneous arterial oxygen saturation &lt;90%) with cyclical changes in saturation suggestive of sleep apnea. <b><i>Results:</i></b> PSG was obtained in 90 patients; 45 patients (mean age = 68 years, SD = 8; 71% men; mean forced expiratory volume in 1 s [FEV<sub>1</sub>] = 50.6% predicted value, SD = 18.6%; data from 41 patients) fulfilled the criteria for sleep apnea (mean apnea-hypopnea index = 32.6 events/h, SD = 19.9) and 45 patients (mean age = 69 years, SD = 8; 87% men; mean FEV<sub>1</sub> predicted value 44.6%, SD = 15%) did not (mean apnea-hypopnea index = 5.5 events/h, SD = 3.8). None of the patients’ characteristics (including demographic, anthropometric, and physiologic measures) predicted the diagnosis of sleep apnea according to PSG results. <b><i>Conclusion:</i></b> The diagnosis of sleep apnea in patients with moderate to severe COPD cannot rely on nocturnal oximetry alone, even when typical cyclical changes in saturation are seen on oximetry tracing. When suspecting an overlap syndrome, a full-night, in-laboratory PSG should be obtained.
DOI: 10.6084/m9.figshare.3206545.v2
title: raw data - Domain-general neural correlates of dependency formation: using complex tones to simulate language

description: In the corresponding study, we develop a new approach to mimic the interplay of sequential position as well as categorical and relational information in natural language syntax (word category and agreement) in a non-linguistic target detection paradigm using musical instruments. Participants were instructed to (covertly) detect target tones which were de fined by instrument change and pitch rise between subsequent tones at the last two positions of four-tone sequences. We analysed the EEG using event-related averaging and time-frequency decomposition.show striking similarities to results obtained from linguistic experiments. The files here are the raw EEG data of the 24 subjects who participated in the study, "notes.txt" contains the trigger codes.
DOI: 10.6084/m9.figshare.19255091.v1
title: Data Jumlah Rumah Sakit di Jawa Barat - 140917.docx

description: Data Jumlah Rumah Sakit di Jawa Barat
DOI: 10.6084/m9.figshare.26886628.v1
title: 20240901_starrydata2

description: All data on Starrydata2, a database of experimental properties in the field of inorganic materials
DOI: 10.6084/m9.figshare.17032412.v1
title: Supplementary Material for: Dissociative-Traumatic Dimension and Triple Network: An EEG Functional Connectivity Study in a Sample of University Students

description: <b><i>Aims:</i></b> We investigated the association among triple network electroencephalographic (EEG) functional connectivity, dissociative symptoms, and childhood trauma (CT) in a sample of university students. <b><i>Sampling and Methods:</i></b> Seventy-six participants (30 males and 46 females; mean age 22.12 ± 2.35) completed self-report measures investigating dissociative symptoms, CT, and depressive symptoms. Participants also performed an eyes-closed resting-state EEG recording. EEG analyses were conducted through the exact low-resolution electromagnetic tomography (eLORETA) software. <b><i>Results:</i></b> A 2-step cluster analysis revealed 2 groups: participants (<i>N</i> = 23) with high dissociative-traumatic dimension symptoms (DTD+) and participants (<i>N</i> = 53) with low DTD symptoms (DTD−). Compared to DTD− subjects, DTD+ participants showed decreased theta connectivity between the salience network (SN) and central executive network (CEN), specifically between the right anterior insula and the left posterior parietal cortex. No significant correlation was detected between EEG data and clinical variables. <b><i>Conclusion:</i></b> Our results raise the possibility of a dysfunctional connectivity pattern occurring between the SN and CEN in individuals with high DTD symptoms. Such connectivity pattern might reflect the neuropsychophysiological disintegration related to pathological dissociation.
DOI: 10.6084/m9.figshare.27889173.v1
title: Origin data PbS@rGO

description: Here are origin data of PbS@rGO.
DOI: 10.6084/m9.figshare.13244270.v1
title: Madidi Project Full Dataset - version 4.1

description: This item contains version 4.1 of the Madidi Project's full dataset. The zip file contains: (1) raw data, which was downloaded from Tropicos (www.tropicos.org) on September 7 2020; (2) R scripts used to modify, correct and clean the raw data; (3) clean data that are the output of the R scripts, and which are the point of departure for most uses of the Madidi Dataset; (4) additional post-cleaning scripts that obtain some additional but non-essential information from the clean data (e.g. by extracting environmental data from rasters); and (5) a miscellaneous collection of additional non-essential information and figures. This item also includes the Data Use Policy for these data.<br>The core dataset of the Madidi Project consists of a network of ~500 forest plots distributed in and around the Madidi National Park in Bolivia. This network contains 50 permanently marked large plots (1-ha), as well as &gt;450 temporary small plots (0.1-ha). Within the large plots, all woody individuals with a dbh ≥10 cm have been mapped, tagged, measured and identified. Some of these plots have also been re-visited and information on mortality, recruitment and growth exists. Within the small plots, all woody individuals with a dbh ≥2.5 cm have been measured and identified. Each plot has some edaphic and topographic information, and some large plots have information on various plant functional traits. <br><br>The Madidi Project is a collaborative research effort to document and study plant biodiversity in the Amazonia and Tropical Andes of northwestern Bolivia. The project is currently lead by the Missouri Botanical Garden (MBG), in collaboration with the Herbario Nacional de Bolivia. The management of the project is at MBG, where J. Sebastian Tello (sebastian.tello@mobot.org) is the scientific director and Olga Martha Montiel (olgamartha.montiel@mobot.org) is the administrative director. The directors oversee the activities of a research team based in Bolivia. MBG works in collaboration with other data contributors (currently: Manuel J. Macía [manuel.macia@uam.es], Gabriel Arellano [gabriel.arellano.torres@gmail.com] and Beatriz Nieto [sonneratia@gmail.com]), with a representative from the Herbario Nacional de Bolivia (LPB; Carla Maldonado [carla.maldonado1@gmail.com]), as well as with other close associated researchers from various institutions. For more information regarding the organization and objectives of the Madidi Project, you can visit the project’s website (www.madidiproject.weebly.com).
DOI: 10.6084/m9.figshare.24242137.v1
title: Supplementary Material for: Long-term Acetylcholinesterase Depletion Alters the Levels of Key Synaptic Proteins while Maintaining Neuronal Markers in the Aging Zebrafish (Danio rerio) Brain

description: Introduction: Interventions targeting cholinergic neurotransmission like acetylcholinesterase (AChE) inhibition distinguish potential mechanisms to delay age-related impairments and attenuate deficits related to neurodegenerative diseases. However, the chronic effects of these interventions are not well-described. Methods: In the current study, global levels of cholinergic, cellular, synaptic, and inflammation-mediating proteins were assessed within the context of aging and chronic reduction of AChE activity. Long-term depletion of AChE activity was induced by using a mutant zebrafish line and they were compared with the wildtype group at young and old ages. Results: Results demonstrated that AChE activity was lower in both young and old mutants and this decrease coincided with a reduction in ACh content. Additionally, an overall age-related reduction in AChE activity and the AChE/ACh ratio was observed, this decline was more prominent in wildtype groups. The levels of an immature neuronal marker were upregulated in mutants, while a glial marker showed an overall reduction. Mutants had preserved levels of inhibitory and presynaptic elements with aging, whereas glutamate receptor subunit levels declined. Discussion/Conclusion: Long-term AChE activity depletion induces synaptic and cellular alterations. These data provide further insights into molecular targets and adaptive responses following the long-term reduction of AChE activity that was also targeted pharmacologically to treat neurodegenerative diseases in human subjects.
DOI: 10.15131/shef.data.21310803.v1
title: The Staphylococcus aureus cell division protein, DivIC, interacts with the cell wall and controls its biosynthesis. Supplementary information. Fluorescence microscopy raw images Fig. 1d; 2a,c; 4a, c, e; 5d, f; 6c. ATM raw images Fig. 3a

description: The Staphylococcus aureus cell division protein, DivIC, interacts with the cell wall and controls its biosynthesis. Supplementary information. Fluorescence microscopy raw images Fig. 1d; 2a,c; 4a. c. e 5d, f; 6c. TEM raw images Fig. 3a
DOI: 10.6084/m9.figshare.23932314.v1
title: D_dimer

description: D-dimer in death predicting of Covid=19
DOI: 10.6084/m9.figshare.24303265.v1
title: Erythrophleum fordii_Data_file_1_Table.1.xlsx

description: Genome assembly of Erythrophleum fordii.
DOI: 10.6084/m9.figshare.1551966.v1
title: The Relationship Between Gender and Eye Colour

description: This study took place on September 15,2015 at York University Keele campus. 20 test subjects were observed and asked for their eye colour via a verbal survey.
DOI: 10.6084/m9.figshare.26367397.v1
title: Outward M&A China Database by industry

description: The database contains information on mergers and acquisitions of Chinese companies worldwide for the period 2011-2017, categorized by industry. The data is extracted from Zephyr, a cross-border M&A database from BVD and is anonymized
DOI: 10.6084/m9.figshare.8204867.v1
title: spatialData_NumData_1000_neuron.mat

description: The dataset is the basis of our analysis of correlated gene expression (CGE) in the developing mouse brain.