cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pskttf
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.2_1",
 "TaxonKey is Rumex persicarioides L."
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002831-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25914/4jfb-jn42
title: Australian Gridded Climate Data (AGCD) v1.0.2/ Australian Water Availability Project (AWAP)
DOI: 10.15468/dl.b9fd2z
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.2_1",
 "TaxonKey is Sabulina nuttallii (Pax) Dillenb. & Kadereit"
 ]
}

 The dataset includes 21 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002833-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9vpk3q
title: Occurrence Download

description: A dataset containing 1085 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "Geometry POLYGON((-75.5993079330832 8.803073635634135,-75.5993079330832 8.492835583420884,-74.7082253663451 8.492835583420884,-74.7082253663451 8.803073635634135,-75.5993079330832 8.803073635634135))",
 "TaxonKey is one of (Plantae, Plantae)"
 ]
 }
 ]
}

 The dataset includes 1085 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002832-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25914/j9h0-c780
title: Australian Gridded Climate Data (AGCD) v2.0.2
DOI: 10.15468/dl.nxxkpg
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.2_1",
 "TaxonKey is Sagina decumbens (Elliott) Torr. & A.Gray"
 ]
}

 The dataset includes 34 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002834-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mvspme
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.2_1",
 "TaxonKey is Salix amygdaloides Andersson"
 ]
}

 The dataset includes 36 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002835-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ypzapx
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.2_1",
 "TaxonKey is Saussurea angustifolia (L.) DC."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002836-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10846290
title: Vibration data of rotating machines subjected to different failure conditions

description: These data were used for implementing a project on the analysis of failures in rotating machines, using a combined approach of exploratory data analysis and convolutional neural networks (CNNs).
DOI: 10.5281/zenodo.10846291
title: Vibration data of rotating machines subjected to different failure conditions

description: These data were used for implementing a project on the analysis of failures in rotating machines, using a combined approach of exploratory data analysis and convolutional neural networks (CNNs).
DOI: 10.5281/zenodo.10362514
title: General Company Dataset - Including Companies Description

description: A dataset of companies including relevant labels and descriptions of those companies.
DOI: 10.5281/zenodo.10362515
title: General Company Dataset - Including Companies Description

description: A dataset of companies including relevant labels and descriptions of those companies.
DOI: 10.15468/dl.7jvu2a
title: Occurrence Download

description: A dataset containing 6162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Falco peregrinus Tunstall, 1771"
 ]
}

 The dataset includes 6162 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002843-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ej3wxc
title: Occurrence Download

description: A dataset containing 9694 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tremarctos ornatus (F.G.Cuvier, 1825)"
 ]
}

 The dataset includes 9694 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002844-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u7ksp2
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chaetomys subspinosus (Olfers, 1818)"
 ]
}

 The dataset includes 43 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002845-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qskux9
title: Occurrence Download

description: A dataset containing 150451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "TaxonKey is Squamata"
 ]
}

 The dataset includes 150451 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002826-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10065159
title: Complex words as shortest paths
DOI: 10.5281/zenodo.10065158
title: Complex words as shortest paths
DOI: 10.5281/zenodo.10684061
title: Complex words as shortest paths
DOI: 10.5281/zenodo.12575261
title: Complex words as shortest paths
DOI: 10.15468/dl.z9qze3
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cardamine schinziana"
 ]
}

 The dataset includes 86 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023378-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8f3d8k
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mus musculus",
 "Country is Venezuela (Bolivarian Republic of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 60 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023377-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/77747cfa-f219-4211-aa77-80f7d75ca017
title: Data underlying the MSc project: Human predictions of another vehicle at an intersection

description: MSc Thesis project in collaboration with TU Delft and cogniBIT GmbH on human prediction of another vehicle at an intersection. <br>30 participants were shown 168 intersection scenarios to analyse the influence of heading angle, relative position, blinkers, deceleration and lateral offset on the predicted directions. The predicted direction response is an array of [Forward%, Left%, Right%], always summing to 100%. When the participant was unsure about the direction a [33.3%, 33.3%, 33.3%] response was given (also the default option), when the participant was very confident about a direction the response would be [100%, 0%, 0%] in the left/forward/right direction.<br>The human prediction responses are stored in the .h5 files. Please read the metadata.txt file for the contents of each file.<br>To recreate the experiment, the video and image files are to be used with the experiment_gui.py from the gitlab page below. The files need to be stored in a /data/experiment/ directory or the location in the python file needs to be changed. <br>https://gitlab.tudelft.nl/tud-cor-hri/student-projects/human-predictions-in-traffic-joop<br>Within the experiment_gui.py code, the participant_ID value needs to be changed to the pseudonymized ID for the corresponding participant. The ID is also responsible for the random seed, which affects the random order the videos are shown in.<br>The experiment was approved by the TU Delft Ethics committee, and requires participant of the experiment to sign an informed consent form prior to taking part in the experiment. No PII of the participant is stored within the dataset.
DOI: 10.4121/77747cfa-f219-4211-aa77-80f7d75ca017.v1
title: Data underlying the MSc project: Human predictions of another vehicle at an intersection

description: MSc Thesis project in collaboration with TU Delft and cogniBIT GmbH on human prediction of another vehicle at an intersection. <br>30 participants were shown 168 intersection scenarios to analyse the influence of heading angle, relative position, blinkers, deceleration and lateral offset on the predicted directions. The predicted direction response is an array of [Forward%, Left%, Right%], always summing to 100%. When the participant was unsure about the direction a [33.3%, 33.3%, 33.3%] response was given (also the default option), when the participant was very confident about a direction the response would be [100%, 0%, 0%] in the left/forward/right direction.<br>The human prediction responses are stored in the .h5 files. Please read the metadata.txt file for the contents of each file.<br>To recreate the experiment, the video and image files are to be used with the experiment_gui.py from the gitlab page below. The files need to be stored in a /data/experiment/ directory or the location in the python file needs to be changed. <br>https://gitlab.tudelft.nl/tud-cor-hri/student-projects/human-predictions-in-traffic-joop<br>Within the experiment_gui.py code, the participant_ID value needs to be changed to the pseudonymized ID for the corresponding participant. The ID is also responsible for the random seed, which affects the random order the videos are shown in.<br>The experiment was approved by the TU Delft Ethics committee, and requires participant of the experiment to sign an informed consent form prior to taking part in the experiment. No PII of the participant is stored within the dataset.
DOI: 10.15468/dl.nnvvrc
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Irania compacta"
 ]
}

 The dataset includes 14 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023381-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xuz6vp
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ionopsidium savianum"
 ]
}

 The dataset includes 191 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023379-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hab2ac
title: Occurrence Download

description: A dataset containing 5030 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scirpus validus creber, Scirpus validus creber, Scirpus validus laeviglumis, Scirpus validus creber, Scirpus validus laeviglumis, Scirpus welwitschii, Schoenoplectus triqueter, Cyperus triqueter, Eleogiton triqueter, Heleogiton lejeunei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 5030 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023380-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12487075
title: Global Genomic Neurofibromatosis Neoplasia
DOI: 10.34740/kaggle/dsv/12487084
title: UNET Lung Segmentation Weights for Chest X Rays
DOI: 10.15468/dl.ggszda
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "and" : [
 "MediaType is Image",
 "TaxonKey is Lytorhynchus diadema"
 ]
}

 The dataset includes 124 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023382-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15781384
title: Data for 'Angiotensin 1-7 Modulates the Dynamics and Activation of the Proto-oncogene Mas Receptor'

description: The proto-oncogene Mas receptor (MasR) is a Class A (orphan-type) G protein-coupled receptor (GPCR) involved in the protective arm of the renin–angiotensin system (RAS). Angiotensin 1–7 (Ang 1–7), an endogenous heptapeptide, has been proposed to modulate MasR activity; however, the structural mechanisms underlying this modulation remain elusive.In this study, we investigated the conformational dynamics of Ang 1–7-bound and unbound MasR using classical all-atom molecular dynamics (MD) simulations and docking-based modeling. We performed the active and inactive states of MasR using AlphaFold-based structural predictions and conducted 1 μs all-atom MD simulations for each condition using the GROMACS 2020.5 software suite. Blind peptide–receptor docking was performed using MDockPeP, a statistical potential-based ab initio docking platform, with the ITScorePeP scoring function. For each conformation, the top-scoring pose (i.e., the structure with the lowest ITScorePeP) was selected as the starting point for MD simulations.Key structural features such as transmembrane helix displacement, micro-switch stabilization, and center-of-mass shifts were analyzed throughout the trajectories. VMD 1.9.3 was used to create movies of Ang 1–7-bound MasR in both inactive and active conformations, shown from top and side views, capturing overall transmembrane helix movements and global conformational dynamics.This dataset includes:    •    Molecular docking input and output files, prepared using MDockPeP.    •    All-atom MD trajectory and topology files for each simulation condition (.xtc, .tpr, .gro), generated using GROMACS 2020.5.    •    VMD movie files visualizing peptide–receptor interactions and dynamic changes in helical arrangement.All files in this repository were directly used to produce the results and figures presented in the manuscript titled “Angiotensin 1-7 Modulates the Dynamics and Activation of the Proto-oncogene Mas Receptor”, and are provided to ensure transparency and reproducibility.
DOI: 10.5281/zenodo.15781385
title: Data for 'Angiotensin 1-7 Modulates the Dynamics and Activation of the Proto-oncogene Mas Receptor'

description: The proto-oncogene Mas receptor (MasR) is a Class A (orphan-type) G protein-coupled receptor (GPCR) involved in the protective arm of the renin–angiotensin system (RAS). Angiotensin 1–7 (Ang 1–7), an endogenous heptapeptide, has been proposed to modulate MasR activity; however, the structural mechanisms underlying this modulation remain elusive.In this study, we investigated the conformational dynamics of Ang 1–7-bound and unbound MasR using classical all-atom molecular dynamics (MD) simulations and docking-based modeling. We performed the active and inactive states of MasR using AlphaFold-based structural predictions and conducted 1 μs all-atom MD simulations for each condition using the GROMACS 2020.5 software suite. Blind peptide–receptor docking was performed using MDockPeP, a statistical potential-based ab initio docking platform, with the ITScorePeP scoring function. For each conformation, the top-scoring pose (i.e., the structure with the lowest ITScorePeP) was selected as the starting point for MD simulations.Key structural features such as transmembrane helix displacement, micro-switch stabilization, and center-of-mass shifts were analyzed throughout the trajectories. VMD 1.9.3 was used to create movies of Ang 1–7-bound MasR in both inactive and active conformations, shown from top and side views, capturing overall transmembrane helix movements and global conformational dynamics.This dataset includes:    •    Molecular docking input and output files, prepared using MDockPeP.    •    All-atom MD trajectory and topology files for each simulation condition (.xtc, .tpr, .gro), generated using GROMACS 2020.5.    •    VMD movie files visualizing peptide–receptor interactions and dynamic changes in helical arrangement.All files in this repository were directly used to produce the results and figures presented in the manuscript titled “Angiotensin 1-7 Modulates the Dynamics and Activation of the Proto-oncogene Mas Receptor”, and are provided to ensure transparency and reproducibility.
DOI: 10.15468/dl.6dh83y
title: Occurrence Download

description: A dataset containing 2235 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Notropis maculatus"
 ]
}

 The dataset includes 2235 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023384-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vc4xbr
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Geometry POLYGON((97.35 26.05,108.54 26.05,108.54 34.31,97.35 34.31,97.35 26.05))",
 "TaxonKey is Syrmaticus reevesii"
 ]
}

 The dataset includes 159 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023383-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.34zbjz
title: Occurrence Download

description: A dataset containing 1757 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Northia seychellana"
 ]
}

 The dataset includes 1757 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023386-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zw8p77
title: Occurrence Download

description: A dataset containing 346 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cirsium vulgare",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 346 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023388-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.seaekt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bursaphelenchus mucronatus",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023387-250711103210423/datasets/export for details.
DOI: 10.15468/dl.5adzqj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Sturnella neglecta)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023390-250711103210423/datasets/export for details.
DOI: 10.15468/dl.xrr8j9
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bursaphelenchus mucronatus",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023391-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14802394
title: Spectral and temporal properties of type-II parametric down-conversion: The impact of losses during state generation

description: This dataset includes the data on which the figures of the preprint "Spectral and temporal properties of type-II parametric down-conversion: The impact of losses during state generation" by Denis A. Kopylov, Michael Stefszky, Torsten Meier, Christine Silberhorn and Polina R. Sharapova  (arXiv:2501.08917) are based. The relevant code for the numerical simulations is also attached.

This work is supported by the “Photonic Quantum Computing” (PhoQC) project, funded by the Ministry for Culture and Science of the State of North-Rhine Westphalia. We acknowledge financial support of the Deutsche Forschungsgemeinschaft (DFG) via the Collaborative Research Center ”Tailored Nonlinear Photonics” TRR 142/3 (Project No. 231447078, Subproject No. C10).