cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26037883
title: Unannotated MAGs (WGS) and OTUs (16S rRNA gene sequencing) from bioaugmented biogas reactors

description: Biomethanation represents a promising approach for biomethane production while biofilm-based process, e.g. trickle bed reactor (TBR), is one of the most efficient solutions. There are challenges to maintain stable performance and debates between pure and mix culture approaches. This study introduces inoculum contains enriched hydrogenotrophic methanogens to TBR as bioaugmentation to access their impacts on the process and, microbial community dynamics. During the enrichment experiment, two samples were collected at start (timepoint 0), and after 1 month, 2 months and 3 months, constituting a total 8 samples for 16S rRNA gene sequencing. For metagenome sequencing, a total 12 samples were collected. Two samples were collected from the raw inoculum and two samples were collected from the enriched inoculum. Then, for the trickle bed reactor experiment, four samples were collected from the TBR-Control and four samples from the TBR-Bio. The TBR samples constituted two samples of the liquid fraction and two samples of the solid fraction/biofilm at the end of the reactor experiment. All samples for microbial analysis were frozen at -18 <sup>°</sup>C immediately, following shipment to a commercial company for analyses (DNASense, 9220 Aalborg, Denmark) in an insulated package containing 5 kg dry ice. The biofilm samples constituted a whole biofilm carrier (Jensen et al., 2019). DNA extraction, 16S rRNA gene sequencing, and metagenomic sequencing was performed by DNASense. Briefly, DNA for 16S rRNA gene sequencing was extracted using the FastDNA Spin Kit for Soil (MP Biomedicals, USA) and paired-end sequenced (2x300 bp) using the MiSeq platform (Illumina, USA). Similarly, DNA for whole genome sequencing was extracted using the DNeasy PowerSoil Pro Kit (Qiagen, Germany) and sequenced on the PromethION P24 platform (Oxford Nanopore Technologies, Oxford, UK).<br>
DOI: 10.15468/dl.zqqxc7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.904002 -32.694874, 148.906248 -32.694874, 148.906248 -32.688136, 148.904002 -32.688136, 148.904002 -32.694874)), ((148.904002 -32.694874, 148.901756 -32.694874, 148.901756 -32.706103, 148.904002 -32.706103, 148.904002 -32.710594, 148.906248 -32.710594, 148.906248 -32.703857, 148.904002 -32.703857, 148.904002 -32.694874)), ((148.906248 -32.710594, 148.906248 -32.71284, 148.901756 -32.71284, 148.901756 -32.715086, 148.910739 -32.715086, 148.910739 -32.710594, 148.906248 -32.710594)), ((148.910739 -32.715086, 148.910739 -32.719578, 148.917477 -32.719578, 148.917477 -32.715086, 148.910739 -32.715086)), ((148.910739 -32.719578, 148.906248 -32.719578, 148.906248 -32.728561, 148.919723 -32.728561, 148.919723 -32.726315, 148.917477 -32.726315, 148.917477 -32.721823, 148.910739 -32.721823, 148.910739 -32.719578)), ((148.910739 -32.710594, 148.917477 -32.710594, 148.917477 -32.706103, 148.919723 -32.706103, 148.919723 -32.703857, 148.910739 -32.703857, 148.910739 -32.710594)))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056097-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.usmsc2
title: Occurrence Download

description: A dataset containing 12853 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Miniopterus schreibersii (Kuhl, 1817)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 12853 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056098-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vk7kuk
title: Occurrence Download

description: A dataset containing 2701 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.092649 -32.681399, 149.092649 -32.683645, 149.088157 -32.683645, 149.088157 -32.685891, 149.092649 -32.685891, 149.092649 -32.688136, 149.094895 -32.688136, 149.094895 -32.690382, 149.097141 -32.690382, 149.097141 -32.694874, 149.101632 -32.694874, 149.101632 -32.690382, 149.103878 -32.690382, 149.103878 -32.688136, 149.110615 -32.688136, 149.110615 -32.683645, 149.106124 -32.683645, 149.106124 -32.681399, 149.092649 -32.681399), (149.094895 -32.688136, 149.094895 -32.683645, 149.101632 -32.683645, 149.101632 -32.688136, 149.094895 -32.688136)), ((149.097141 -32.694874, 149.094895 -32.694874, 149.094895 -32.69712, 149.097141 -32.69712, 149.097141 -32.694874)), ((149.097141 -32.69712, 149.097141 -32.699365, 149.101632 -32.699365, 149.101632 -32.708349, 149.103878 -32.708349, 149.103878 -32.706103, 149.106124 -32.706103, 149.106124 -32.710594, 149.110615 -32.710594, 149.110615 -32.719578, 149.112861 -32.719578, 149.112861 -32.710594, 149.117353 -32.710594, 149.117353 -32.706103, 149.112861 -32.706103, 149.112861 -32.703857, 149.110615 -32.703857, 149.110615 -32.699365, 149.103878 -32.699365, 149.103878 -32.69712, 149.097141 -32.69712)), ((149.110615 -32.719578, 149.103878 -32.719578, 149.103878 -32.721823, 149.106124 -32.721823, 149.106124 -32.726315, 149.110615 -32.726315, 149.110615 -32.719578)), ((149.103878 -32.690382, 149.103878 -32.694874, 149.106124 -32.694874, 149.106124 -32.690382, 149.103878 -32.690382)), ((149.106124 -32.694874, 149.106124 -32.69712, 149.110615 -32.69712, 149.110615 -32.694874, 149.106124 -32.694874)))"
 ]
}

 The dataset includes 2701 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056099-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.75rfe2
title: Occurrence Download

description: A dataset containing 4118 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is Ceratobasidium D.P.Rogers",
 "Year 2000-2024"
 ]
}

 The dataset includes 4118 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056100-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4nnxs6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.284161 -32.71284, 148.284161 -32.715086, 148.288653 -32.715086, 148.288653 -32.719578, 148.290899 -32.719578, 148.290899 -32.726315, 148.288653 -32.726315, 148.288653 -32.728561, 148.290899 -32.728561, 148.290899 -32.733052, 148.297636 -32.733052, 148.297636 -32.719578, 148.293145 -32.719578, 148.293145 -32.715086, 148.290899 -32.715086, 148.290899 -32.71284, 148.284161 -32.71284)), ((148.288653 -32.726315, 148.288653 -32.721823, 148.284161 -32.721823, 148.284161 -32.726315, 148.288653 -32.726315)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056101-240626123714530/datasets/export for details.
DOI: 10.15468/dl.x9hxtq
title: Occurrence Download

description: A dataset containing 134 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prionace glauca (Linnaeus, 1758)",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2022",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 134 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056102-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7266/n7gm85p1
title: Conductivity, temperature, and depth (CTD) data for DEEPEND stations, cruise DP05, R/V Point Sur cruise PS17-21, collected 2017-05-02 - 2017-05-12
DOI: 10.15468/dl.9k4wpk
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Prosopis cineraria (L.) Druce"
 ]
}

 The dataset includes 132 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056105-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/79ef09f1-b5c4-45ff-8bc7-648426be6e7b
title: Sample simulation files for "Effect of dissolved KOH and NaCl on the solubility of water in hydrogen: A Monte Carlo simulation study"

description: Sample simulations input/output files used for the publication titled "Effect of dissolved KOH and NaCl on the solubility of water in hydrogen: A Monte Carlo simulation study". Please read the README files for more details and refer to the main manuscript for more details: https://pubs.aip.org/aip/jcp/article/161/5/054304/3305718/Effect-of-dissolved-KOH-and-NaCl-on-the-solubility
DOI: 10.4121/79ef09f1-b5c4-45ff-8bc7-648426be6e7b.v1
title: Sample simulation files for "Effect of dissolved KOH and NaCl on the solubility of water in hydrogen: A Monte Carlo simulation study"

description: Sample simulations input/output files used for the publication titled "Effect of dissolved KOH and NaCl on the solubility of water in hydrogen: A Monte Carlo simulation study". Please read the README files for more details and refer to the main manuscript for more details: https://pubs.aip.org/aip/jcp/article/161/5/054304/3305718/Effect-of-dissolved-KOH-and-NaCl-on-the-solubility
DOI: 10.15468/dl.svr29g
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.414418 -32.721823, 148.414418 -32.726315, 148.418909 -32.726315, 148.418909 -32.721823, 148.414418 -32.721823))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056107-240626123714530/datasets/export for details.
DOI: 10.15468/dl.ht7xcz
title: Occurrence Download

description: A dataset containing 98375 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-180 -90, 180 -90, 180 90, -180 90, -180 -90))",
 "Depth is greater than or equal to 0m",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Observation, Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Cheloniidae, Dermochelyidae)",
 "CoordinateUncertaintyInMeters is less than 1e+05"
 ]
}

 The dataset includes 98375 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056103-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nz3thu
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is Alatospora pulchella Marvanová",
 "Year 2000-2024"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056108-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t6jcyj
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.142057 -32.721823, 149.142057 -32.728561, 149.144302 -32.728561, 149.144302 -32.726315, 149.148794 -32.726315, 149.148794 -32.721823, 149.142057 -32.721823)), ((149.144302 -32.728561, 149.144302 -32.733052, 149.148794 -32.733052, 149.148794 -32.728561, 149.144302 -32.728561)), ((149.148794 -32.728561, 149.155531 -32.728561, 149.155531 -32.733052, 149.162269 -32.733052, 149.162269 -32.726315, 149.155531 -32.726315, 149.155531 -32.721823, 149.15104 -32.721823, 149.15104 -32.726315, 149.148794 -32.726315, 149.148794 -32.728561)))"
 ]
}

 The dataset includes 19 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056110-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18712/nsd-nsd1397-v3
title: Diet Among Elderly Living at Home in Oslo, 1985

description: This project has dealt with the question of whether old age dementia leads to an insufficient diet or not. One aim has been to gain an impression of the general diet among the elderly in Oslo. Further on, the elderly who needed education about diets the most were identified and described. Information was gathered by interviews about medical and social objects, registering diets and blood analysis in order to achieve information about vitamin B status among the elderly. The sample consists of 255 elderly who live in their own home (as opposed to an institution).
DOI: 10.15468/dl.mpny3f
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is Anguillospora crassa Ingold",
 "Year 2000-2024"
 ]
}

 The dataset includes 24 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056111-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18712/nsd-nsd2377-v2
title: Transitivity Alternations in English and Norwegian: Experimental Investigations, 2016

description: The project investigated verb alternations in English and Norwegian, mainly with the use of psycho-linguistic methods like times judgments, eye tracking, self-paced reading etc. Most experiments were conducted in both English and Norwegian. The data includes results from in total 10 different experiments and one larger corpus study, conducted either at the University of Tromsø or the University of Edinburgh. Each sub-folder contains a brief description of the study.
DOI: 10.15468/dl.24wksw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.431765 -32.721823, 149.431765 -32.726315, 149.434011 -32.726315, 149.434011 -32.721823, 149.431765 -32.721823)), ((149.434011 -32.726315, 149.434011 -32.728561, 149.438502 -32.728561, 149.438502 -32.733052, 149.440748 -32.733052, 149.440748 -32.735298, 149.442994 -32.735298, 149.442994 -32.726315, 149.434011 -32.726315)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056112-240626123714530/datasets/export for details.
DOI: 10.15468/dl.awghhv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.245983 -32.726315, 148.245983 -32.733052, 148.250474 -32.733052, 148.250474 -32.728561, 148.25272 -32.728561, 148.25272 -32.726315, 148.245983 -32.726315))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056114-240626123714530/datasets/export for details.
DOI: 10.15468/dl.x7c8v2
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is Anguillospora filiformis Greath.",
 "Year 2000-2024"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056115-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26519872
title: Dataset from the manuscript by Noirmain et al entitled "Spatio-temporal disparities in phytoplankton dynamics and metabolite production depending on weather conditions"

description: Data from the manuscript by Noirmain et al entitled "Spatio-temporal disparities in phytoplankton dynamics and metabolite production depending on weather conditions"general metabolomicsannotated metabolitesinorganic ion concentrationsphytoplankton taxa and biovolumesbiotic parameters
DOI: 10.6084/m9.figshare.26519866
title: Supplementary materials: Patient-reported preferences for subcutaneous or intravenous administration of parenteral drug treatments in adults with immune disorders: a systematic review and meta-analysis

description: <b>These are peer-reviewed supplementary materials for the article '</b><b>Patient-reported preferences for </b><b>subcutaneous or intravenous </b><b>administration of parenteral drug </b><b>treatments in adults with immune </b><b>disorders: a systematic review and </b><b>meta-analysis</b><b>' published in the</b><b> </b><b><i>Journal of Comparative Effectiveness Research</i></b><b>.</b><b>Supplementary Figure </b><b>1</b><b>:</b> Meta-analysis of patient preferences for home versus hospital treatment.<b>Supplementary Figure </b><b>2</b><b>:</b> LQI 4-scale scores.<b>Supplementary Figure </b><b>3</b><b>:</b> SF-36 PCS and MCS results.<b>Supplementary Table 1:</b> PubMed search terms<b>Supplementary Table 2:</b> PICOS table summarizing inclusion/exclusion criteria<b>Supplementary Table 3:</b> Treatment satisfaction results, TSQM and rating scales<b>Aim:</b> Several studies have found subcutaneous (SC) and intravenous (IV) administration of similar drugs for long-lasting immunological and autoimmune diseases to have similar clinical effectiveness, meaning that what patients report they prefer is, or should be, a major factor in treatment choices. Therefore, it is important to systematically compile evidence regarding patient preferences, treatment satisfaction and health-related quality of life (HRQL) using SC or IV administration of the same drug. <b>Materials & methods:</b> PubMed database searches were run on 15 October 2021. Studies involving patients with experience of both home-based SC and hospital-based IV administration of immunoglobulins or biological therapies for the treatment of any autoimmune disease or primary immunodeficiencies (PIDs) were included. The outcomes assessed were patient preferences, treatment satisfaction and HRQL. Preference data were meta-analyzed using a random-effects model.<b> Results:</b> In total, 3504 citations were screened, and 46 publications describing 37 studies were included in the review. There was a strong overall preference for SC over IV administration, with similar results seen for PIDs and autoimmune diseases: PID, 80% (95% confidence interval [CI], 64–94%) preferred SC; autoimmune diseases, 83% (95% CI: 73–92%); overall, 82% (95% CI: 75–89%). The meta-analysis also found that 84% (95% CI: 75–92%) of patients preferred administration at home to treatment in hospital. Analysis of treatment satisfaction using the life quality index found consistently better treatment interference and treatment setting scores with SC administration than with IV administration. Conclusion: Compared with IV infusions in hospital, patients tend to prefer, to be more satisfied with and to report better HRQL with SC administration of the same drug at home, primarily due to the greater convenience. This study contributes to evidence-based care of patients with autoimmune diseases or PIDs.
DOI: 10.6084/m9.figshare.26519866.v1
title: Supplementary materials: Patient-reported preferences for subcutaneous or intravenous administration of parenteral drug treatments in adults with immune disorders: a systematic review and meta-analysis

description: <b>These are peer-reviewed supplementary materials for the article '</b><b>Patient-reported preferences for </b><b>subcutaneous or intravenous </b><b>administration of parenteral drug </b><b>treatments in adults with immune </b><b>disorders: a systematic review and </b><b>meta-analysis</b><b>' published in the</b><b> </b><b><i>Journal of Comparative Effectiveness Research</i></b><b>.</b><b>Supplementary Figure </b><b>1</b><b>:</b> Meta-analysis of patient preferences for home versus hospital treatment.<b>Supplementary Figure </b><b>2</b><b>:</b> LQI 4-scale scores.<b>Supplementary Figure </b><b>3</b><b>:</b> SF-36 PCS and MCS results.<b>Supplementary Table 1:</b> PubMed search terms<b>Supplementary Table 2:</b> PICOS table summarizing inclusion/exclusion criteria<b>Supplementary Table 3:</b> Treatment satisfaction results, TSQM and rating scales<b>Aim:</b> Several studies have found subcutaneous (SC) and intravenous (IV) administration of similar drugs for long-lasting immunological and autoimmune diseases to have similar clinical effectiveness, meaning that what patients report they prefer is, or should be, a major factor in treatment choices. Therefore, it is important to systematically compile evidence regarding patient preferences, treatment satisfaction and health-related quality of life (HRQL) using SC or IV administration of the same drug. <b>Materials & methods:</b> PubMed database searches were run on 15 October 2021. Studies involving patients with experience of both home-based SC and hospital-based IV administration of immunoglobulins or biological therapies for the treatment of any autoimmune disease or primary immunodeficiencies (PIDs) were included. The outcomes assessed were patient preferences, treatment satisfaction and HRQL. Preference data were meta-analyzed using a random-effects model.<b> Results:</b> In total, 3504 citations were screened, and 46 publications describing 37 studies were included in the review. There was a strong overall preference for SC over IV administration, with similar results seen for PIDs and autoimmune diseases: PID, 80% (95% confidence interval [CI], 64–94%) preferred SC; autoimmune diseases, 83% (95% CI: 73–92%); overall, 82% (95% CI: 75–89%). The meta-analysis also found that 84% (95% CI: 75–92%) of patients preferred administration at home to treatment in hospital. Analysis of treatment satisfaction using the life quality index found consistently better treatment interference and treatment setting scores with SC administration than with IV administration. Conclusion: Compared with IV infusions in hospital, patients tend to prefer, to be more satisfied with and to report better HRQL with SC administration of the same drug at home, primarily due to the greater convenience. This study contributes to evidence-based care of patients with autoimmune diseases or PIDs.