cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25399/unisadata.29985955.v1
title: Semi-arid African savanna habitat suitability for two Vachellia species

description: The habitat suitability of <i>Vachellia</i> <i>stuhlmannii</i> and <i>Vachellia</i> <i>tortilis</i> was assessed using Maximum Entropy model. Location data was collected and nineteen bioclimatic variables data for 1950 to 2000 downloaded from the WorldClim database. Soils were analyzed to investigate their influence on habitat suitability of the two species. MaxEnt effectively predicted current habitat suitability with an average test Area Under Curve value of 0.936 for <i>V. stuhlmannii</i> and 0.689 for <i>V. tortilis</i>. Key influential variables were BIO-1 (Annual mean temperature) with 71.7% highest gain for <i>V. stuhlmannii</i> and BIO-17 (Precipitation of driest quarter) with 65.3% highest gain for <i>V. tortilis</i>. However, BIO-14 (Precipitation of driest month) exhibited limited influence in predicting habitat suitability for both species.<i> </i><i>V. stuhlmannii</i> occupies twenty-nine hectares and <i>V. tortilis</i> covers 102 hectares. Both species predominantly occur on Prismacutanic/pedocutanic B-horizons. <i>V. tortilis</i> also thrive on Glenrosa and Mispah soils, which are crucial for diverse plant and animal life. These findings have practical implications for conservation efforts aimed at protecting both species. Identifying suitable habitats and preserving soil types is crucial as soil affects microclimate conditions and influences moisture retention. Overall, this study provides insights for the conservation of <i>V. stuhlmannii</i><i> </i>and<i> </i><i>V. tortilis</i> in the semi-arid African savanna.
DOI: 10.5281/zenodo.16950350
title: Mapping bat hunting, trade and consumption in Indonesia using records from online platforms

description: The data and code contained in this repository are supplement to the article "Mapping bat hunting, trade and consumption in Indonesia using records from online platforms", published in People and Nature 

The code and data are as follows:



Indonesia_Maxent.R : R code used to train and evaluate MaxEnt models predicting the occurrence of bat hunting, trade and consumption across Indonesia.

wdpa.R: R code used to process data from the World Database of Protected Areas for Indonesia.

indonesia_academic.csv: The academic studies and extracted data used to validate MaxEnt odels predicting the occurrence of bat hunting, trade and consumption across Indonesia.

indonesia_online.csv: Anonymised online records (thinned to 10x10km grid) used to train MaxEnt models predicting the occurrence of bat hunting, trade and consumption across Indonesia. Locations are provided to regency level. All other location information has been removed for data privacy reasons. 

indonesia_env_all.tif: Raster file (10 x 10 km resolution) with environmental predictors of at hunting, trade and consumption across Indonesia.
DOI: 10.5281/zenodo.16950351
title: Mapping bat hunting, trade and consumption in Indonesia using records from online platforms

description: The data and code contained in this repository are supplement to the article "Mapping bat hunting, trade and consumption in Indonesia using records from online platforms", published in People and Nature 

The code and data are as follows:



Indonesia_Maxent.R : R code used to train and evaluate MaxEnt models predicting the occurrence of bat hunting, trade and consumption across Indonesia.

wdpa.R: R code used to process data from the World Database of Protected Areas for Indonesia.

indonesia_academic.csv: The academic studies and extracted data used to validate MaxEnt odels predicting the occurrence of bat hunting, trade and consumption across Indonesia.

indonesia_online.csv: Anonymised online records (thinned to 10x10km grid) used to train MaxEnt models predicting the occurrence of bat hunting, trade and consumption across Indonesia. Locations are provided to regency level. All other location information has been removed for data privacy reasons. 

indonesia_env_all.tif: Raster file (10 x 10 km resolution) with environmental predictors of at hunting, trade and consumption across Indonesia.
DOI: 10.15468/dl.scezme
title: Occurrence Download

description: A dataset containing 74189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clitellata",
 "Year 1999-2001",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Occurrence evidence, Observation)"
 ]
}

 The dataset includes 74189 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049910-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdqyy2
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Caragana arborescens",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 55 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049953-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29381993
title: CD44 and CD29 Expression in Naïve bMSCs – Flow Cytometry Data (Fig 1E)

description: Flow cytometry analysis of surface markers CD29 (APC-labeled primary antibody) and CD44 (APC-labeled secondary antibody) in bovine mesenchymal stem cells (bMSCs) derived from various tissue origins—tail base (TB), subcutaneous fat (SC), and visceral fat (VC)—at passages 6 and 9 (P6, P9). Over 90% of cells expressed both markers across origins (n = 3 biological replicates). Controls include unstained cells (CA) and secondary antibody only (2AB) samples.
DOI: 10.6084/m9.figshare.29381993.v1
title: CD44 and CD29 Expression in Naïve bMSCs – Flow Cytometry Data (Fig 1E)

description: Flow cytometry analysis of surface markers CD29 (APC-labeled primary antibody) and CD44 (APC-labeled secondary antibody) in bovine mesenchymal stem cells (bMSCs) derived from various tissue origins—tail base (TB), subcutaneous fat (SC), and visceral fat (VC)—at passages 6 and 9 (P6, P9). Over 90% of cells expressed both markers across origins (n = 3 biological replicates). Controls include unstained cells (CA) and secondary antibody only (2AB) samples.
DOI: 10.6084/m9.figshare.29382107
title: GFP Expression in Lentivirus-Transduced bMSCs – Flow Cytometry Data (Fig 1F)

description: Flow cytometry measurement of GFP expression in bovine mesenchymal stem cells (bMSCs) and HEK293T cells following lentiviral transduction using different viral envelopes (VSV-G and RD114A). GFP-transduced samples (n = 3) exhibit clear green fluorescence compared to non-transduced controls (n = 2). Histograms display the distribution of GFP expression intensity.
DOI: 10.6084/m9.figshare.29382107.v1
title: GFP Expression in Lentivirus-Transduced bMSCs – Flow Cytometry Data (Fig 1F)

description: Flow cytometry measurement of GFP expression in bovine mesenchymal stem cells (bMSCs) and HEK293T cells following lentiviral transduction using different viral envelopes (VSV-G and RD114A). GFP-transduced samples (n = 3) exhibit clear green fluorescence compared to non-transduced controls (n = 2). Histograms display the distribution of GFP expression intensity.
DOI: 10.6084/m9.figshare.29390804
title: CD44 and CD29 Expression in TP53 and PTEN KO bMSCs – Flow Cytometry Data (Fig 6B)

description: Flow cytometry analysis of surface markers CD29 (APC) and CD44 (FITC) in wild-type (WT) bovine mesenchymal stem cells and CRISPR knockout cells targeting TP53 and PTEN, along with a non-targeting control sgRNA (nc74). Knockout cells maintained surface marker expression levels comparable to WT controls, while the non-targeting control showed a slight reduction. For WT cells, controls include unstained cells, CD29-only stained, and CD44-only stained samples. All other samples were double-stained (CD29+CD44) for compensation.
DOI: 10.6084/m9.figshare.29390804.v1
title: CD44 and CD29 Expression in TP53 and PTEN KO bMSCs – Flow Cytometry Data (Fig 6B)

description: Flow cytometry analysis of surface markers CD29 (APC) and CD44 (FITC) in wild-type (WT) bovine mesenchymal stem cells and CRISPR knockout cells targeting TP53 and PTEN, along with a non-targeting control sgRNA (nc74). Knockout cells maintained surface marker expression levels comparable to WT controls, while the non-targeting control showed a slight reduction. For WT cells, controls include unstained cells, CD29-only stained, and CD44-only stained samples. All other samples were double-stained (CD29+CD44) for compensation.
DOI: 10.25399/unisadata.29985862
title: Artificial waterhole type selection data for elephant and rhino

description: Artificial water provisioning occurs in southern African nature reserves, with different game species preferring specific waterhole types. Movement patterns and behaviour of elephant and rhino are associated with water availability. These mega-herbivores affect the environment and species they encounter, especially at waterholes which are focal points for congregation and interaction. Understanding artificial waterhole type preferences is important, particularly during times of water shortage, allowing managers to manipulate numbers and types of waterholes. This study investigates elephant and rhino use of waterholes in the Olifants West Nature Reserve, South Africa. Waterhole types in the study area are earth dams, concrete pans, reservoirs and troughs. Visitation frequency, proportion of visits, time visited, and variables affecting frequency of visits were investigated using camera traps. Findings indicated that elephants preferred reservoirs, black rhino preferred earth dams, and white rhino preferred troughs. Different social groupings had distinct preferences for different waterhole types. Elephant breeding herds preferred reservoirs, while bachelor groups avoided them and preferred earth dams. Black and white rhino bachelor groups preferred troughs, and cows and bull-and-cow groups preferred earth dams. Data from this study will facilitate implementation of efficient conservation plans for existing areas containing the study species, and for potential release sites.
DOI: 10.25399/unisadata.29985862.v1
title: Artificial waterhole type selection data for elephant and rhino

description: Artificial water provisioning occurs in southern African nature reserves, with different game species preferring specific waterhole types. Movement patterns and behaviour of elephant and rhino are associated with water availability. These mega-herbivores affect the environment and species they encounter, especially at waterholes which are focal points for congregation and interaction. Understanding artificial waterhole type preferences is important, particularly during times of water shortage, allowing managers to manipulate numbers and types of waterholes. This study investigates elephant and rhino use of waterholes in the Olifants West Nature Reserve, South Africa. Waterhole types in the study area are earth dams, concrete pans, reservoirs and troughs. Visitation frequency, proportion of visits, time visited, and variables affecting frequency of visits were investigated using camera traps. Findings indicated that elephants preferred reservoirs, black rhino preferred earth dams, and white rhino preferred troughs. Different social groupings had distinct preferences for different waterhole types. Elephant breeding herds preferred reservoirs, while bachelor groups avoided them and preferred earth dams. Black and white rhino bachelor groups preferred troughs, and cows and bull-and-cow groups preferred earth dams. Data from this study will facilitate implementation of efficient conservation plans for existing areas containing the study species, and for potential release sites.
DOI: 10.48324/dandi.001205/0.250602.0251
title: Adaptation to visual sparsity enhances responses to isolated stimuli

description: Associated Reference Publication: Sensory systems adapt their response properties to the statistics of their inputs. For instance, visual systems adapt to low-order statistics like mean and variance to encode stimuli efficiently or to facilitate specific downstream computations. However, it remains unclear how other statistical features affect sensory adaptation. Here, we explore how Drosophila’s visual motion circuits adapt to stimulus sparsity, a measure of the signal’s intermittency not captured by low-order statistics alone. Early visual neurons in both ON and OFF pathways alter their responses dramatically with stimulus sparsity, responding positively to both light and dark sparse stimuli but linearly to dense stimuli. These changes extend to downstream ON and OFF direction-selective neurons, which are activated by sparse stimuli of both polarities, but respond with opposite signs to light and dark regions of dense stimuli. Thus, sparse stimuli activate both ON and OFF pathways, recruiting a larger fraction of the circuit and potentially enhancing the salience of isolated stimuli. Overall, our results reveal visual response properties that increase the fraction of the circuit responding to sparse, isolated stimuli.
DOI: 10.5281/zenodo.16908555
title: Dataset for molecular dynamics simulations for hydrogen implantation and water retention

description: Imput files and results of molecular dynamics simulations (with LAMMPS) for hydrogen implantation and water molecule retention in plagioclase. The detailed contents of each file are shown in README.txt.
DOI: 10.5281/zenodo.16908556
title: Dataset for molecular dynamics simulations for hydrogen implantation and water retention

description: Imput files and results of molecular dynamics simulations (with LAMMPS) for hydrogen implantation and water molecule retention in plagioclase. The detailed contents of each file are shown in README.txt.
DOI: 10.15468/dl.fhbxk7
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 {
 "or" : [
 "Geometry POLYGON((-79.47323 -14.11242,-75.47323 -14.11242,-75.47323 -10.11242,-79.47323 -10.11242,-79.47323 -14.11242))",
 "Geometry POLYGON((-76.98882 -12.07268,-76.98129 -12.07268,-76.98129 -12.07128,-76.98882 -12.07128,-76.98882 -12.07268))"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Locality is Separadora Industrial — Km. 1",
 "OccurrenceStatus is Present",
 "Year 1652-2023"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021423-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/nrix7y
title: Data for Constructing Custom Thermodynamics Using Deep Learning

description: This document contains the datasets for the paper "Constructing Custom Thermodynamics Using Deep Learning" by Xiaoli Chen, Beatrice W. Soh, Zi-En Ooi, Eleonore Vissol-Gaudin, Haijun Yu, Kostya S. Novoselov, Kedar
Hippalgaonkar and Qianxiao Li.
DOI: 10.7910/dvn/q6mnvy
title: Petition of Jaffery Henery

description: &lt;p&gt;Petition subject: Property &lt;/p&gt; &lt;p&gt;Original: &lt;a href="http://nrs.harvard.edu/urn-3:FHCL:28548124"&gt;http://nrs.harvard.edu/urn-3:FHCL:28548124&lt;/a&gt; &lt;/p&gt; &lt;p&gt;Date of creation: 1755-05-28 &lt;/p&gt; &lt;p&gt;Petition location: Providence, Rhode Island &lt;/p&gt; &lt;p&gt;Selected signatures:&lt;ol&gt;&lt;li&gt;Jaffery Henery&lt;/li&gt;&lt;li&gt;Marey Henry&lt;/li&gt;&lt;/ol&gt; &lt;/p&gt; &lt;p&gt;Actions taken on dates: 1755-06-07,1755-06-07 &lt;/p&gt; &lt;p&gt;Legislative action: Received and read and granted in the House on June 7, 1755 and sent for concurrence and received and read and concurred in the Council on June 7, 1755 &lt;/p&gt; &lt;p&gt;Total signatures: 2 &lt;/p&gt; &lt;p&gt;Legislative action summary: Received, read, granted, sent, received, read, concurred &lt;/p&gt; &lt;p&gt;Females of color signatures: 1 &lt;/p&gt; &lt;p&gt;Males of color signatures: 1 &lt;/p&gt; &lt;p&gt;Female only signatures: No &lt;/p&gt; &lt;p&gt;Identifications of signatories: Indians, [males of color], [females of color] &lt;/p&gt; &lt;p&gt;Prayer format was &lt;a href="http://en.wikipedia.org/wiki/Printing"&gt;printed&lt;/a&gt; vs. &lt;a href="http://en.wikipedia.org/wiki/Manuscript"&gt;manuscript&lt;/a&gt;: Manuscript &lt;/p&gt; &lt;p&gt;Signatory column format: not column separated &lt;/p&gt; &lt;p&gt;Native American tribe: Nipmuc &lt;/p&gt; &lt;p&gt;Acknowledgements: Supported by the National Endowment for the Humanities (PW-5105612), Massachusetts Archives of the Commonwealth, Radcliffe Institute for Advanced Study at Harvard University, Center for American Political Studies at Harvard University, Institutional Development Initiative at Harvard University, and Harvard University Library.&lt;/p&gt; &lt;p&gt;Additional archivist notes: Jaffery Henry, Jeffrey Henry, Mary Henry, brother, Samuel Umpinton, common lands, Natick, sale, to sell lands, survey, support, Hopkinton, Jonathan Olney, John Andrews, Indian guardians, William Shirley, Jonathan Richardson, John Jones, Thomas Hubbard, Thomas Clark &lt;/p&gt; &lt;p&gt;Location of the petition at the Massachusetts Archives of the Commonwealth: Massachusetts Archives volume 32, pages 618-619 &lt;/p&gt;
DOI: 10.15468/dl.c8cbuy
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Mimosa urandiensis Santos-Silva, Marc.F.Simon & A.M.G.Azevedo"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017871-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/fyghfo
title: High-content screening image dataset and quantitative image analysis of Salmonella infected human cells

description: Cell biology, confocal fluorescence microscopic images of a high-content screening dataset acquired by a Perkin Elmer Opera microscope.
DOI: 10.7910/dvn/nsodqx
title: A13_24322.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/4dc34fa2-868c-46f6-81e7-b1a7cf8cb9af'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/4dc34fa2-868c-46f6-81e7-b1a7cf8cb9af
DOI: 10.7910/dvn/s7pwcr
title: A11_20107.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/8f2e92e4-b9bb-41b2-902c-9203ba497276'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/8f2e92e4-b9bb-41b2-902c-9203ba497276
DOI: 10.7910/dvn/s7hm0d
title: Wright Casebook Edited; Docketed Case: 23,647
DOI: 10.7910/dvn/uxtxa
title: Passed Resolves; Resolves 1837, c.75, SC1/series 228, Petition of Thomas Puttillow

description: &lt;p&gt;Petition subject: Arguing for the right to petition and protesting the existence of slavery in Washington D.C. &lt;/p&gt; &lt;p&gt;Original: &lt;a href="http://nrs.harvard.edu/urn-3:FHCL:10456141"&gt;http://nrs.harvard.edu/urn-3:FHCL:10456141&lt;/a&gt; &lt;/p&gt; &lt;p&gt;Date of creation: (unknown) &lt;/p&gt; &lt;p&gt;Petition location: Sandwich &lt;/p&gt; &lt;p&gt;Legislator, committee, or address that the petition was sent to: Abram Nye, Sandwich &lt;/p&gt; &lt;p&gt;Selected signatures:&lt;ol&gt;&lt;li&gt;Thomas Puttillow&lt;/li&gt;&lt;li&gt;Ezra Tobey&lt;/li&gt;&lt;li&gt;Daniel B. Nye&lt;/li&gt;&lt;li&gt;Samuel Lloyd&lt;/li&gt;&lt;/ol&gt; &lt;/p&gt; &lt;p&gt;Total signatures: 55 &lt;/p&gt; &lt;p&gt;Legal voter signatures (males not identified as non-legal): 55 &lt;/p&gt; &lt;p&gt;Female only signatures: No &lt;/p&gt; &lt;p&gt;Identifications of signatories: citizens, ["others"] &lt;/p&gt; &lt;p&gt;Prayer format was &lt;a href="http://en.wikipedia.org/wiki/Printing"&gt;printed&lt;/a&gt; vs. &lt;a href="http://en.wikipedia.org/wiki/Manuscript"&gt;manuscript&lt;/a&gt;: Printed &lt;/p&gt; &lt;p&gt;Additional non-petition or unrelated documents available at archive: additional documents available &lt;/p&gt; &lt;p&gt;Location of the petition at the Massachusetts Archives of the Commonwealth: Resolves 1837, c.75, passed April 12, 1837 &lt;/p&gt; &lt;p&gt;Acknowledgements: Supported by the National Endowment for the Humanities (PW-5105612), Massachusetts Archives of the Commonwealth, Radcliffe Institute for Advanced Study at Harvard University, Center for American Political Studies at Harvard University, Institutional Development Initiative at Harvard University, and Harvard University Library.&lt;/p&gt;
DOI: 10.7910/dvn/z9ykf
title: Senate Unpassed Legislation 1839, Docket 10525, SC1/series 231, Petition of Lemuel Gott

description: &lt;p&gt;Petition subject: To abolish slavery in Washington D.C. and against the admission of Florida and slave states &lt;/p&gt; &lt;p&gt;Original: &lt;a href="http://nrs.harvard.edu/urn-3:FHCL:11857876"&gt;http://nrs.harvard.edu/urn-3:FHCL:11857876&lt;/a&gt; &lt;/p&gt; &lt;p&gt;Date of creation: (unknown) &lt;/p&gt; &lt;p&gt;Petition location: Sandy Bay, town of Gloucester &lt;/p&gt; &lt;p&gt;Legislator, committee, or address that the petition was sent to: Samuel L. Andrews, Gloucester &lt;/p&gt; &lt;p&gt;Selected signatures:&lt;ol&gt;&lt;li&gt;Lemuel Gott&lt;/li&gt;&lt;li&gt;Samuel Small&lt;/li&gt;&lt;li&gt;Catherine M. Jannet&lt;/li&gt;&lt;/ol&gt; &lt;/p&gt; &lt;p&gt;Total signatures: 211 &lt;/p&gt; &lt;p&gt;Legal voter signatures (males not identified as non-legal): 128 &lt;/p&gt; &lt;p&gt;Female signatures: 83 &lt;/p&gt; &lt;p&gt;Female only signatures: No &lt;/p&gt; &lt;p&gt;Identifications of signatories: inhabitants, males, females, ["others"] &lt;/p&gt; &lt;p&gt;Prayer format was &lt;a href="http://en.wikipedia.org/wiki/Printing"&gt;printed&lt;/a&gt; vs. &lt;a href="http://en.wikipedia.org/wiki/Manuscript"&gt;manuscript&lt;/a&gt;: Printed &lt;/p&gt; &lt;p&gt;Signatory column format: column separated &lt;/p&gt; &lt;p&gt;Additional non-petition or unrelated documents available at archive: no additional documents &lt;/p&gt; &lt;p&gt;Location of the petition at the Massachusetts Archives of the Commonwealth: Senate Unpassed 1839, Docket 10525 &lt;/p&gt; &lt;p&gt;Acknowledgements: Supported by the National Endowment for the Humanities (PW-5105612), Massachusetts Archives of the Commonwealth, Radcliffe Institute for Advanced Study at Harvard University, Center for American Political Studies at Harvard University, Institutional Development Initiative at Harvard University, and Harvard University Library.&lt;/p&gt;
DOI: 10.7910/dvn/h8cfqq
title: Average inhibition diameter (mm) and antimicrobial susceptibility level

description: Average inhibition zone diameters and susceptibility of all isolates to each antimicrobial agent, as determined by the agar disk diffusion method and comparison with CLSI charts. As mentioned in the Materials and Methods section, many breakpoints are not available for some antimicrobial agents and microorganisms, and the susceptibility thus remains unknown. However, isolates showing no inhibition halo were considered resistant and those with an inhibition diameter of at least 27 mm were considered susceptible
DOI: 10.7910/dvn/lyq3rf
title: Replication data for: Resource investments and the timing of tax deductions

description: This document describes the replication files for “Resource investments and the timing of tax deductions” by Lassi Ahlvik and Torfinn Harding for the Journal of the Association of Environmental and Resource Economists (JAERE).
DOI: 10.7910/dvn/m0ho3h
title: Imperfect Banana: An open image dataset of imperfect Bananas for machine vision enabled grading of produce based on visual characteristics.

description: Open Image Data Set of Imperfect Bananas