cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17675401
title: IODP Expedition 321 Inorganic carbon (coulometer)

description: Inorganic carbon (carbonate) is determined by coulometry, which uses a photodetection cell to measure carbon dioxide evolved during sample acidification. Report includes percent inorganic carbon and calcium carbonate.
DOI: 10.5281/zenodo.17675395
title: IODP Expedition 321 Stratigraphic Correlation

description: Affine and splice files created for stratigraphic correlation.
DOI: 10.5281/zenodo.17675396
title: IODP Expedition 321 Stratigraphic Correlation

description: Affine and splice files created for stratigraphic correlation.
DOI: 10.5281/zenodo.17674686
title: IODP Expedition 321 Core composite images

description: A digital composite image (PNG) is made for each core comprising core sections scanned using a line-scan camera. The composite layout is equivalent to traditional core table photos. Top left is top of core; color and meter rule references are included.
DOI: 10.5281/zenodo.17674685
title: IODP Expedition 321 Core composite images

description: A digital composite image (PNG) is made for each core comprising core sections scanned using a line-scan camera. The composite layout is equivalent to traditional core table photos. Top left is top of core; color and meter rule references are included.
DOI: 10.5281/zenodo.17675394
title: IODP Expedition 321 Core summary

description: Report includes detailed core data: drilling and coring depths, advancement, recovered core length measured on the catwalk and final curated length, core recovery, and sections cut.
DOI: 10.5281/zenodo.17675393
title: IODP Expedition 321 Core summary

description: Report includes detailed core data: drilling and coring depths, advancement, recovered core length measured on the catwalk and final curated length, core recovery, and sections cut.
DOI: 10.5281/zenodo.17675468
title: Data from: Foraging behavior by bees in relation to conspecifics: a meta-analysis and vote count of local enhancement versus local inhibition

description: Data associated with paper: 

Foraging behavior by bees in relation to conspecifics: a meta-analysis and vote count of local enhancement versus local inhibition by Eva S Horna Lowell, Mayra C Vidal, Emily C Weintraub, Shannon M Murphy
DOI: 10.5281/zenodo.17675467
title: Data from: Foraging behavior by bees in relation to conspecifics: a meta-analysis and vote count of local enhancement versus local inhibition

description: Data associated with paper: 

Foraging behavior by bees in relation to conspecifics: a meta-analysis and vote count of local enhancement versus local inhibition by Eva S Horna Lowell, Mayra C Vidal, Emily C Weintraub, Shannon M Murphy
DOI: 10.5281/zenodo.17674682
title: IODP Expedition 321 Carbonates composite report

description: This composite report includes data from two analyses (total carbon from Elemental analysis [CHNS], and inorganic carbon from [Coulometer]). Each row combines the  CHNS and Coulometer data from measurements made on the same sample at the same time for a particular section and section offset (depth). If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate data type (Elemental analysis and Coulometer). If the same sample was measured multiple times by any of the methods, results in the report will be combined on one line where possible. Each additional replicate result will be shown in subsequent rows and will be combined where possible. Report includes results for carbon forms: total, inorganic, calcium carbonate, and organic by difference, along with total hydrogen, nitrogen, and sulfur.
DOI: 10.5281/zenodo.17674681
title: IODP Expedition 321 Carbonates composite report

description: This composite report includes data from two analyses (total carbon from Elemental analysis [CHNS], and inorganic carbon from [Coulometer]). Each row combines the  CHNS and Coulometer data from measurements made on the same sample at the same time for a particular section and section offset (depth). If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate data type (Elemental analysis and Coulometer). If the same sample was measured multiple times by any of the methods, results in the report will be combined on one line where possible. Each additional replicate result will be shown in subsequent rows and will be combined where possible. Report includes results for carbon forms: total, inorganic, calcium carbonate, and organic by difference, along with total hydrogen, nitrogen, and sulfur.
DOI: 10.15468/dl.daznmw
title: Occurrence Download

description: A dataset containing 30992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Gambusia holbrooki",
 "Year 2000-2025"
 ]
}

 The dataset includes 30992 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002745-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17674683
title: IODP Expedition 321 Elemental analysis (CHNS)

description: Fundamental elemental component (total carbon, hydrogen, nitrogen, and sulfur) fluctuations help define the origin, depositional environment, and diagenetic alteration of source materials. To determine C, H, N, and S, solid samples are reacted with a catalyst, separated by chromatography, and detected by thermal conductivity on a FlashEA 1112 CHNS elemental analyzer. Organic carbon can be directly measured on the elemental analyzer by acidification of the sample to drive off carbonate as carbon dioxide before analyzing. Total organic carbon on this report is measured rather than calculated.
DOI: 10.5281/zenodo.17674684
title: IODP Expedition 321 Elemental analysis (CHNS)

description: Fundamental elemental component (total carbon, hydrogen, nitrogen, and sulfur) fluctuations help define the origin, depositional environment, and diagenetic alteration of source materials. To determine C, H, N, and S, solid samples are reacted with a catalyst, separated by chromatography, and detected by thermal conductivity on a FlashEA 1112 CHNS elemental analyzer. Organic carbon can be directly measured on the elemental analyzer by acidification of the sample to drive off carbonate as carbon dioxide before analyzing. Total organic carbon on this report is measured rather than calculated.
DOI: 10.15468/dl.y2bz5m
title: Occurrence Download

description: A dataset containing 527480 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Material sample, Material citation, Specimen, Occurrence evidence, Living Specimen)",
 "GadmGid is USA.5.19_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 527480 records from 261 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002713-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2w8gh
title: Occurrence Download

description: A dataset containing 2503 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.36224 5.69441,-75.39924 5.68225,-75.37828 5.6336,-75.34516 5.64835,-75.28254 5.69415,-75.31981 5.72805,-75.36224 5.69441))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2503 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002746-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fehsea
title: Occurrence Download

description: A dataset containing 946413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-09-26",
 "EventDate is less than or equal to 2025-10-26",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 },
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 946413 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002738-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ewhct6
title: Occurrence Download

description: A dataset containing 46283 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Micropterus salmoides",
 "Year 2000-2025"
 ]
}

 The dataset includes 46283 records from 185 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002747-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26008/1912/bco-dmo.987227.1
title: Vegetation surveys at artificial reefs in Kāneʻohe Bay, Oʻahu conducted in 2022 and 2023 as part of a reef halo dynamics study

description: The goal of this dataset was to quantify substrate cover (vegetation or sand) of the benthos surrounding artificial reefs in Kāneʻohe Bay, Oʻahu, Hawaiʻi from August 2022-2023. These surveys were done monthly. We recorded three 5-meter-long video transects, spaced evenly around each artificial reef, starting from each of the three top-layer cinder blocks of the artificial reef, positioned perpendicularly to the cinder block and going outwards into the seagrass meadow. On each video transect, photos were taken continuously starting at the artificial reef. Each photo was imported into ImageJ, where the scale was set based on a 10 cm measure on the transect, and then a virtual 20x20 cm quadrat was laid directly on the right side of the transect. Virtual quadrats were laid consecutively every 20 cm (e.g., a quadrat from each of 0-20 cm, 20-40 cm, 40-60 cm, etc. Then, 20 random points were generated inside each distance bin and classified as sand or vegetation.
DOI: 10.15468/dl.xw33jb
title: Occurrence Download

description: A dataset containing 685 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "NetworkKey is 99d66b6c-9087-452f-a9d4-f15f2c2d0e7e",
 "TaxonKey is Chordata"
 ]
 },
 {
 "and" : [
 "InstitutionCode is one of (FMNH)",
 "TaxonKey is one of (Locustellidae [GBIF Backbone Taxonomy])"
 ]
 }
 ]
}

 The dataset includes 685 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002748-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30680393
title: Trend analysis of three-dimensional linear features used in cartographic quality control

description: DADOS SIMULADOS E REAIS UTILIZADOS PARA CRIACAO DO MÉTODO PROPOSTO
DOI: 10.6084/m9.figshare.30680393.v1
title: Trend analysis of three-dimensional linear features used in cartographic quality control

description: DADOS SIMULADOS E REAIS UTILIZADOS PARA CRIACAO DO MÉTODO PROPOSTO
DOI: 10.15468/dl.wavfhw
title: Occurrence Download

description: A dataset containing 203853 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 {
 "or" : [
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "Geometry POLYGON((-103.74296 19.29659,-103.29153 19.29659,-103.29153 19.69458,-103.74296 19.69458,-103.74296 19.29659))"
 ]
 },
 "TaxonKey is Cactaceae"
 ]
}

 The dataset includes 203853 records from 247 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002718-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ws2sp9
title: Occurrence Download

description: A dataset containing 2503 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.36224 5.69441,-75.39924 5.68225,-75.37828 5.6336,-75.34516 5.64835,-75.28254 5.69415,-75.31981 5.72805,-75.36224 5.69441))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2503 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002751-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.23987826.v1
title: Functional dissimilarity of bacterial communities and global bacterial genomes

description: This file contains datasets that were produced from the analysis of the functional dissimilarity of bacterial communities from freshwater (microcosms) and from bacterial genomes accessed from the Genome Taxonomy Database (GTDB). This file serve as the input to produce the graphs from the Article "A global eco-evolutionary pattern of bacterial functional diversity". It contains:meta_alpha.csv: The alpha functional dissimilarity (Rao) of 14 bacterial communitiesmeta_beta.csv: The beta functional dissimilarity (DKG) of 14 bacterial communities, i.e., 91 pairs of micrososmsmeta_gamma.csv: The gamma functional dissimilarity (Bray-Curtis) of 122 MAGs recovered from 20 microcosmsdifference_allKOcat.csv: The calculated difference between the median functional dissimilarity of 999 random subsets of each 10, 25, 50,122, and 200 genomes for each functional categories and the median functional dissimilarity of all functional genesdf_nb_genes.csv: number of functional genes (unique Kegg Orthologs (KOs)) for each functional categories in both the recovered MAGs from the microcosms and genomes from the GTDB.
DOI: 10.15468/dl.fkf489
title: Occurrence Download

description: A dataset containing 25078 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lampyridae",
 "Year 1990-2000"
 ]
}

 The dataset includes 25078 records from 249 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002750-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17470190
title: TCGA-GBM360: GBM360 aggressiveness maps for a subset of TCGA pathology slides

description: This collection contains algorithmically-derived spatial aggressiveness maps for a subset of microscopy images from the TCGA collections. The data was generated using the GBM360 algorithm developed by Olivier Gevaert lab at Stanford University. These spatial aggressiveness maps indicate the local aggressiveness of different tumor regions, with higher aggressiveness contributing to a worse overall survival, based on the analysis performed by the authors of the algorithm.

The data included in this dataset were produced using the algorithm described in [1,2]. 

This dataset contains the annotations harmonized into DICOM Segmentation representation.

This dataset is available from the NCI Imaging Data Commons (IDC), and can be explored interactively in the IDC Portal using this link: https://portal.imaging.datacommons.cancer.gov/explore/filters/?analysis_results_id=TCGA-GBM360

Specific files included in the record can be downloaded using the attached manifests. The suffix of the manifest indicates its content, which is the list of pointers to the public Google Cloud Storage (GCS) or Amazon Web Services (AWS) buckets containing the files included in the collection:





-gcs.s5cmd: GCS-based manifest (to download the files described in the manifest, execute this command: pip install --upgrade idc-index && idc download manifest).




-aws.s5cmd: AWS-based manifest (to download the files described in the manifest, execute this command: pip install --upgrade idc-index && idc download manifest).




-dcf.dcf: Gen3-based manifest (see details in https://learn.canceridc.dev/data/organization-of-data/guids-and-uuids). 



[1] Zheng, Y., Carrillo-Perez, F., Pizurica, M. et al. Spatial cellular architecture predicts prognosis in glioblastoma. Nat Commun 14, 4122 (2023). https://doi.org/10.1038/s41467-023-39933-0

[2] https://github.com/gevaertlab/GBM360
DOI: 10.5281/zenodo.17470191
title: TCGA-GBM360: GBM360 aggressiveness maps for a subset of TCGA pathology slides

description: This collection contains algorithmically-derived spatial aggressiveness maps for a subset of microscopy images from the TCGA collections. The data was generated using the GBM360 algorithm developed by Olivier Gevaert lab at Stanford University. These spatial aggressiveness maps indicate the local aggressiveness of different tumor regions, with higher aggressiveness contributing to a worse overall survival, based on the analysis performed by the authors of the algorithm.

The data included in this dataset were produced using the algorithm described in [1,2]. 

This dataset contains the annotations harmonized into DICOM Segmentation representation.

This dataset is available from the NCI Imaging Data Commons (IDC), and can be explored interactively in the IDC Portal using this link: https://portal.imaging.datacommons.cancer.gov/explore/filters/?analysis_results_id=TCGA-GBM360

Specific files included in the record can be downloaded using the attached manifests. The suffix of the manifest indicates its content, which is the list of pointers to the public Google Cloud Storage (GCS) or Amazon Web Services (AWS) buckets containing the files included in the collection:





-gcs.s5cmd: GCS-based manifest (to download the files described in the manifest, execute this command: pip install --upgrade idc-index && idc download manifest).




-aws.s5cmd: AWS-based manifest (to download the files described in the manifest, execute this command: pip install --upgrade idc-index && idc download manifest).




-dcf.dcf: Gen3-based manifest (see details in https://learn.canceridc.dev/data/organization-of-data/guids-and-uuids). 



[1] Zheng, Y., Carrillo-Perez, F., Pizurica, M. et al. Spatial cellular architecture predicts prognosis in glioblastoma. Nat Commun 14, 4122 (2023). https://doi.org/10.1038/s41467-023-39933-0

[2] https://github.com/gevaertlab/GBM360
DOI: 10.15468/dl.p8db8t
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Faramea schunkeana"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002753-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/txf4h2
title: Race/ethnicity swap survey

description: These files are the replication data/dofiles for my working papers "Quantifying the Causal Effect of Ethnoracial Background in Online Dating" and "The Role of Educational Background in Dating between Black and White People". I also include results of pretests I conducted prior to the main phase of the data collection.
DOI: 10.15468/dl.ntkb72
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-83.77861 36.76012,-78.52605 36.76012,-78.52605 40.89313,-83.77861 40.89313,-83.77861 36.76012))",
 "HasGeospatialIssue is false",
 "TaxonKey is Antrodiaetus"
 ]
}

 The dataset includes 65 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002754-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11319429
title: Audio Swarm supplementary material - audio/video recordings
DOI: 10.5281/zenodo.11319428
title: Audio Swarm supplementary material - audio/video recordings
DOI: 10.34740/kaggle/dsv/13821473
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.gbsc4r
title: Occurrence Download

description: A dataset containing 4492 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Trifolium"
 ]
}

 The dataset includes 4492 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002757-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kne877
title: Occurrence Download

description: A dataset containing 206 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "TaxonKey is one of (Eremophilus mutisii [GBIF Backbone Taxonomy])"
 ]
}

 The dataset includes 206 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002756-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.23988996
title: Habitat specificity of functional dissimilarity profiles of bacterial genomes

description: This file contains 3 datasets that were used to analyse differences in functional dissimilarity of bacterial genomes from major Earth's microbiomes (Gut, Soil and Sediments, Aquatic and Built Environment).Habitat_genomes: File displaying a list of 4 elements (a list of 906 accession number of genomes from each habitat type.all_env_2025.csv:Bray curtis functional dissimilarity of 100 genomes (4950 pairs of genomes) for each of the environment for various functional categoriesCode_Part3: The R code associated with this analysis
DOI: 10.6084/m9.figshare.23988996.v2
title: Habitat specificity of functional dissimilarity profiles of bacterial genomes

description: This file contains 3 datasets that were used to analyse differences in functional dissimilarity of bacterial genomes from major Earth's microbiomes (Gut, Soil and Sediments, Aquatic and Built Environment).Habitat_genomes: File displaying a list of 4 elements (a list of 906 accession number of genomes from each habitat type.all_env_2025.csv:Bray curtis functional dissimilarity of 100 genomes (4950 pairs of genomes) for each of the environment for various functional categoriesCode_Part3: The R code associated with this analysis
DOI: 10.6084/m9.figshare.23988996.v1
title: Habitat specificity of functional dissimilarity profiles of bacterial genomes

description: This file contains 2 datasets that were used to analyse differences in functional dissimilarity of bacterial genomes from major Eath's microbiomes (Gut, Soil and Sediments, Aquatic and Built Environment).Habitat_genomes: File (RDS) displaying a list of 4 elements (a list of 906 accession number of genomes from each habitat type.all_env.csv:Bray curtis functional dissimilarity of 100 genomes (4950 pairs of genomes) for each of the environment for various functional categories