cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.xw45rv
title: Occurrence Download

description: A dataset containing 8820 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laguncularia racemosa (L.) C.F.Gaertn."
 ]
}

 The dataset includes 8820 records from 262 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0258840-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sg2gtv
title: Occurrence Download

description: A dataset containing 339292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acaena ovalifolia Ruiz & Pav., Acaena pallida (Kirk) J.W.Dawson, Acallopais rudis Pascoe, 1877, Acalolepta aesthetica (Olliff, 1890), Acalypha amentacea Roxb., Acalypha aristata Kunth, Acalypha australis L., Acalypha brachystachya Hornem., Acalypha hispida Burm.f., Acalypha indica L., Acalypha virginica L., Acalypha wilkesiana Müll.Arg., Acalypta parvula (Fallén, 1807), Acanalonia conica (Say, 1830), Acanalonia excavata Van Duzee, 1933, Acantharctus posteli (Forest, 1963), Acanthocephalus anguillae (Müller, 1780), Acanthocereus tetragonus (L.) Hummelinck, Acanthocnemus nigricans (Hope, 1845), Eriococcus lagerstroemiae Kuwana, 1907, Acanthogobius flavimanus (Temminck & Schlegel, 1845), Acantholobulus pacificus (Edmondson, 1931), Acantholybas brunneus (Breddin, 1900), Acantholyda erythrocephala (Linnaeus, 1758), Acanthomysis aspera Ii, 1964, Acanthomysis hwanhaiensis Ii, 1964, Acanthopagrus bifasciatus (Forsskål, 1775), Acanthophora muscoides (L.) Bory, Acanthophora nayadiformis (Delile) Papenf., 1968, Acanthoscelides macrophthalmus (Schaeffer, 1907), Acanthoscelides obtectus (Say, 1831), Dactylispa pallidipennis (Motschulsky, 1861), Acanthoscelides quadridentatus (Schaeffer, 1907), Acanthospermum australe (Loefl.) Kuntze, Acanthospermum glabratum (DC.) Wild, Acanthospermum hispidum DC., Xanthium spinosum L., Acanthoxyla geisovii (Kaup, 1866), Acanthoxyla inermis Salmon, 1955, Acanthuchus trispinifer Fairmaire, Acanthurus chirurgus (Bloch, 1787), Acanthurus coeruleus Bloch & Schneider, 1801, Acanthurus guttatus Forster, 1801, Acanthurus monroviae Steindachner, 1876, Acanthurus sohal (Forsskål, 1775), Acanthus hungaricus (Borbás) Baen., Acanthus mollis L., Acanthus spinosus L., Acar plicata (Dillwyn, 1817), Acarapis woodi (Rennie, 1921), Acartia fossae Gurney, 1927, Acartia tonsa Dana, 1849, Acartia clausi Giesbrecht, 1889, Acartia omorii Bradford, 1976, Acartia centrura Giesbrecht, 1889, Acartia spinicauda Giesbrecht, 1889, Acartiella sinensis Shen & Lee, 1963, Acathrix trymatus Keifer, 1962, Acaudaleyrodes rachipora (Singh, 1931), Accipiter badius (Gmelin, 1788))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 339292 records from 1127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254325-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bt7fgm
title: Occurrence Download

description: A dataset containing 3840 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Espeletia [GBIF Backbone Taxonomy])",
 "StateProvince is one of (Boyacá)",
 "PublishingOrg is one of (d5ef14a1-5177-4547-9ce2-46d84a4214eb, 04ce62dd-30ec-4d98-8b30-b09cafc3ac38, 2a7e3080-28a9-11dd-97cd-b8a03c50a862, d42b7e5d-a3e5-4fc2-8b3d-105336d70898, 6c147991-c3bf-453d-a778-3bea9a534804, 7a079928-aee9-418a-b083-6152d01c78d6, cccff716-2694-4209-9f9e-2f7a484465a0, ab13adb9-ce23-444d-87c9-ce41f03ef2b3, dbc07e15-c05b-4781-9ec3-59d331a9a4d8)"
 ]
 }
 ]
}

 The dataset includes 3840 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008469-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/8dcxqf
title: Replication Data for: How People Choose Between Criminal Opportunities

description: This repository contains the data file and the Stata do file for Krajewski, Pickett, and Jacobs' article "How People Choose Between Criminal Opportunities."

&lt;b&gt; Abstract: &lt;/b&gt; The explanatory power of criminological theories may differ across decision-making stages, because involvement decisions (the choice to become involved in crime) and event decisions (the choice between criminal opportunities) are theoretically distinct. Although our understanding of offender decision-making has advanced greatly in recent years, event decisions remain understudied. Rational choice theory (RCT) indicates that crime benefits, arrest risk, sanction severity, opportunity cost, and payout timeliness should drive event decisions. Other scholarship indicates that the presence of co-offenders and victim type may also matter. To test the causal effects of each of these factors, we conducted a paired-profile conjoint experiment with a national sample (N = 1,023), wherein participants collectively evaluated over 10,000 criminal opportunities. Consistent with RCT, crime benefits, arrest risk, and sanction severity exerted sizeable effects on event decisions. Victim type also mattered, such that participants preferred to target wealthy individuals and large corporations. Other factors (e.g., co-offenders, opportunity cost) had weaker effects. Event decision-making was mostly similar regardless of participants’ self-control or past offending. Our experiment suggests that RCT may be especially useful for explaining event decisions, even if other theories provide a stronger account of involvement decisions.
DOI: 10.5281/zenodo.18517964
title: Single-cell transcriptome of skin biopsy-derived cells from healthy controls and psoriasis vulgaris patients (N1)

description: This dataset contains single-cell RNA sequencing profiles of skin cells obtained from 5 mm punch biopsies of patients with chronic plaque psoriasis and healthy donors. Single-cell suspensions were prepared by enzymatic digestion and mechanical dissociation, followed by live cell sorting. Libraries were constructed using 10x Genomics Chromium Single Cell 3′ RNA kits and sequenced on an Illumina HiSeq 4000 platform. Single-cell RNA sequencing data analysis was performed, including cell type annotation, providing a comprehensive transcriptomic map of heterogeneous skin cell populations in health and psoriasis.

 

This page provides data from a healthy donor, N1.
DOI: 10.5281/zenodo.18517963
title: Single-cell transcriptome of skin biopsy-derived cells from healthy controls and psoriasis vulgaris patients (N1)

description: This dataset contains single-cell RNA sequencing profiles of skin cells obtained from 5 mm punch biopsies of patients with chronic plaque psoriasis and healthy donors. Single-cell suspensions were prepared by enzymatic digestion and mechanical dissociation, followed by live cell sorting. Libraries were constructed using 10x Genomics Chromium Single Cell 3′ RNA kits and sequenced on an Illumina HiSeq 4000 platform. Single-cell RNA sequencing data analysis was performed, including cell type annotation, providing a comprehensive transcriptomic map of heterogeneous skin cell populations in health and psoriasis.

 

This page provides data from a healthy donor, N1.
DOI: 10.5281/zenodo.16978303
title: Data for "Interaction-driven quantum phase transitions between topological and crystalline orders of electrons"

description: Data from figures of the main text.
DOI: 10.5281/zenodo.16978302
title: Data for "Interaction-driven quantum phase transitions between topological and crystalline orders of electrons"

description: Data from figures of the main text.
DOI: 10.15468/dl.wqnkf5
title: Occurrence Download

description: A dataset containing 981 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynocephalus przewalskii"
 ]
}

 The dataset includes 981 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000878-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eywfns
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anadendrum microstachyum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 82 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000877-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jmqp5b
title: Occurrence Download

description: A dataset containing 260 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynocephalus persicus"
 ]
}

 The dataset includes 260 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000879-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dub4f5
title: Occurrence Download

description: A dataset containing 229 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynocephalus putjatai"
 ]
}

 The dataset includes 229 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000881-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kam9su
title: Occurrence Download

description: A dataset containing 27522 records in GBIF matching the query:

 SELECT gbifid, datasetkey, specieskey, kingdom, phylum, class, "order", family, genus, species, scientificname, decimallatitude, decimallongitude, eventdate, institutioncode, "year" AS obs_year, basisofrecord, coordinateuncertaintyinmeters, issue
 FROM occurrence
 WHERE
 decimallatitude IS NOT NULL
 AND decimallongitude IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND coordinateuncertaintyinmeters IS NOT NULL
 AND coordinateuncertaintyinmeters &gt; 0
 AND coordinateuncertaintyinmeters &lt;= 200.0
 AND decimallatitude &gt;= 20.3845909579754
 AND decimallatitude &lt;= 24.552553756517728
 AND decimallongitude &gt;= 72.69223410576828
 AND decimallongitude &lt;= 79.35068917845273
 AND GBIF_Within('POLYGON ((79.350689 20.384591, 79.350689 24.552554, 72.692234 24.552554, 72.692234 20.384591, 79.350689 20.384591))', decimallatitude, decimallongitude) = TRUE
 

 The dataset's 27522 records were derived from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000871-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5pq4fn
title: Occurrence Download

description: A dataset containing 23839 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Isoetes lacustris"
 ]
}

 The dataset includes 23839 records from 343 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000880-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvejkt
title: Occurrence Download

description: A dataset containing 240 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynocephalus raddei"
 ]
}

 The dataset includes 240 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000883-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3rznyp
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynocephalus reticulatus"
 ]
}

 The dataset includes 247 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000884-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kuqcv8
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anaphyllopsis americana",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 65 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000885-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.48xh5c
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Jatropha orangeana"
 ]
}

 The dataset includes 22 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000886-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.papt7w
title: Occurrence Download

description: A dataset containing 30271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Asia, Europe, Africa)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Polypodium cambricum"
 ]
}

 The dataset includes 30271 records from 432 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000887-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n26xem
title: Occurrence Download

description: A dataset containing 2240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anthurium gracile",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 2240 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000890-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18524407
title: micromeria_lachnophylla_spades_02.fasta.gz
DOI: 10.5281/zenodo.18524406
title: micromeria_lachnophylla_spades_02.fasta.gz
DOI: 10.15468/dl.mb6e8n
title: Occurrence Download

description: A dataset containing 406 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Kalanchoe beharensis"
 ]
}

 The dataset includes 406 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000892-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d7hbhg
title: Occurrence Download

description: A dataset containing 409026 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panicum"
 ]
}

 The dataset includes 409026 records from 2042 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000860-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13992090
title: Dataset for "Assmann et al. High variation in the surface extent of freshwater ponds creates dynamic Arctic tundra landscapes in the lowlands of Eastern Siberia"

description: Overview

Time-series of true colour drone imagery (RGB) and associated digital surface models (DSM) for three tundra landscapes. These data are required to replicate the analysis in "Assmann et al. High variation in the surface extent of freshwater ponds creates dynamic Arctic tundra landscapes in the lowlands of Eastern Siberia" (link to preprint).

Location:                                   Kytalyk National Park, Russian FederationTime-span:                                2014-2021 (near-annual)What:                                         drone derived RGB raster imagery and digital surface models (.tif)Ground-sampling distance:    12 cmProjection:                                UTM55N (EPSG: 32655)

The data are intended to be integrated into the GitHub repository (https://github.com/jakobjassmann/pond_project, also archived on Zenodo: https://doi.org/10.5281/zenodo.17318379). Instructions below.

For further detail on data generation and flight information see manuscript and supplementary materials, as well as information provided on the GitHub code repository. 

Site names

Please note that the abbreviated site names used here and in the code repository differ from those used in the manuscript. 




dataset / code
manuscript


cbh
"high"


tlb
"med"


rdg
"low"




Integration with code repository

To integrate the data with the code repository:



Clone the code repository to your local machine. (https://github.com/jakobjassmann/pond_project, also archived on Zenodo: https://doi.org/10.5281/zenodo.17318379)

Download the compressed data in this repository. 

Extract archive contents as follows:



cbh.7z    ->     data/drone_data/cbh/

tlb.7z     ->     data/drone_data/tlb/

rdg.7z    ->     data/drone_data/rdg/




Citation

When uisng this data in the context of scientific work, we kindly ask to cite the accompanying manuscript (below) in addtion to the dataset citation provided by Zenodo. At the time of writing the final manuscript is in press, when referencing the dataset before publication, please cite the following preprint:

Assmann, J.J., Akandil, C., Plekhanova, E., Le Moigne, A., Karsanaev, S.V., Maximov, T.C., Schaepman-Strub, G. (2025). Freshwater ponds create highly dynamic Arctic tundra landscapes. Preprint on Research Square. https://doi.org/10.21203/rs.3.rs-5581925/v1

Acknowledgements

We would like to thank all drone-pilots and field team members who contributed to the data collection during the field seasons 2014 – 2021, including Inge Grünberg (nee Juszak), Maitane Iturrate-Garcia and Vitalii Zemlianskii. This study was supported by the Swiss National Science Foundation (grant no. 178753) and the University Research Priority Program on Global Change and Biodiversity of the University of Zurich.
DOI: 10.5281/zenodo.13992091
title: Dataset for "Assmann et al. High variation in the surface extent of freshwater ponds creates dynamic Arctic tundra landscapes in the lowlands of Eastern Siberia"

description: Overview

Time-series of true colour drone imagery (RGB) and associated digital surface models (DSM) for three tundra landscapes. These data are required to replicate the analysis in "Assmann et al. High variation in the surface extent of freshwater ponds creates dynamic Arctic tundra landscapes in the lowlands of Eastern Siberia" (link to preprint).

Location:                                   Kytalyk National Park, Russian FederationTime-span:                                2014-2021 (near-annual)What:                                         drone derived RGB raster imagery and digital surface models (.tif)Ground-sampling distance:    12 cmProjection:                                UTM55N (EPSG: 32655)

The data are intended to be integrated into the GitHub repository (https://github.com/jakobjassmann/pond_project, also archived on Zenodo: https://doi.org/10.5281/zenodo.17318379). Instructions below.

For further detail on data generation and flight information see manuscript and supplementary materials, as well as information provided on the GitHub code repository. 

Site names

Please note that the abbreviated site names used here and in the code repository differ from those used in the manuscript. 




dataset / code
manuscript


cbh
"high"


tlb
"med"


rdg
"low"




Integration with code repository

To integrate the data with the code repository:



Clone the code repository to your local machine. (https://github.com/jakobjassmann/pond_project, also archived on Zenodo: https://doi.org/10.5281/zenodo.17318379)

Download the compressed data in this repository. 

Extract archive contents as follows:



cbh.7z    ->     data/drone_data/cbh/

tlb.7z     ->     data/drone_data/tlb/

rdg.7z    ->     data/drone_data/rdg/




Citation

When uisng this data in the context of scientific work, we kindly ask to cite the accompanying manuscript (below) in addtion to the dataset citation provided by Zenodo. At the time of writing the final manuscript is in press, when referencing the dataset before publication, please cite the following preprint:

Assmann, J.J., Akandil, C., Plekhanova, E., Le Moigne, A., Karsanaev, S.V., Maximov, T.C., Schaepman-Strub, G. (2025). Freshwater ponds create highly dynamic Arctic tundra landscapes. Preprint on Research Square. https://doi.org/10.21203/rs.3.rs-5581925/v1

Acknowledgements

We would like to thank all drone-pilots and field team members who contributed to the data collection during the field seasons 2014 – 2021, including Inge Grünberg (nee Juszak), Maitane Iturrate-Garcia and Vitalii Zemlianskii. This study was supported by the Swiss National Science Foundation (grant no. 178753) and the University Research Priority Program on Global Change and Biodiversity of the University of Zurich.
DOI: 10.15468/dl.jv9ktq
title: Occurrence Download

description: A dataset containing 48502 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus strobus L.",
 "Year is greater than or equal to 1981",
 "HasCoordinate is true"
 ]
}

 The dataset includes 48502 records from 286 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0296866-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112044304
title: Cuneiform Tablet 1913.14.0147, Spurlock 1913.14.0147

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0147; CDLI P420528 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Pale Orange Yellow (10YR 8/2.5) ❧ [Physical Object Note:] 6.6 x 4.7 x 2.6 cm (93g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.yszjfj
title: Occurrence Download

description: A dataset containing 378 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acourtia turbinata (La Llave & Lex.) Reveal & R.M.King"
 ]
}

 The dataset includes 378 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0304095-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.