cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.n0yy0a
title: Occurrence Download

description: A dataset containing 971 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Données du Comité Départemental de Protection de la Nature et de l'Environnement de Loir-et-Cher (CDPNE) - Données CDPNE 41 - Faune - études financement DREAL 2017"
 ]
}

 The dataset includes 971 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026144-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9wka6y
title: Occurrence Download

description: A dataset containing 121077 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Angola",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 121077 records from 334 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042465-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvqvua
title: Occurrence Download

description: A dataset containing 282634 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Naturalis Biodiversity Center (NL) - Aves"
 ]
}

 The dataset includes 282634 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000747-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvwyzm
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "Geometry POLYGON((-73.12148 -11.89941,-73.53466 -13.28355,-69.40292 -14.1099,-68.6592 -13.07696,-69.23765 -11.52756,-73.12148 -11.89941))",
 "TaxonKey is Marmosa Gray, 1821"
 ]
}

 The dataset includes 19 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028802-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fak7ar
title: Occurrence Download

description: A dataset listing the 5749 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-5.00427 36.41244,-3.88367 36.41244,-3.88367 37.23033,-5.00427 37.23033,-5.00427 36.41244))",
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 5749 records were derived from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021716-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bwkzks
title: Occurrence Download

description: A dataset containing 3672 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ctenosaura pectinata (Wiegmann, 1834)"
 ]
}

 The dataset includes 3672 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012564-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lz1qgk
title: Occurrence Download

description: A dataset containing 11123 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coryphaena hippurus Linnaeus, 1758"
 ]
}

 The dataset includes 11123 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003745-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2fsu3t
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Algyroides marchi Valverde, 1958"
 ]
}

 The dataset includes 245 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001312-150221044754056/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k1wtnh
title: Occurrence Download

description: A dataset listing the 343 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-101.24313 18.98987,-100.54001 18.98987,-100.54001 19.3277,-101.24313 19.3277,-101.24313 18.98987))",
 "TaxonKey is Animalia"
 ]
}

 The dataset's 343 records were derived from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019514-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hatnff
title: Occurrence Download

description: A dataset containing 11633 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is SILENE-FAUNE-PACA - DREAL_PACA_-_N2000_-_Commune_de_Névache_2017_12_18"
 ]
}

 The dataset includes 11633 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026133-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.unw79e
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "Geometry POLYGON((-79.98322 -4.07043,-78.50555 -4.07043,-78.50555 -2.35657,-79.98322 -2.35657,-79.98322 -4.07043))",
 "TaxonKey is Falco peregrinus Tunstall, 1771"
 ]
}

 The dataset includes 60 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042481-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n4mk9m
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Symphyotrichum peteroanum (Phil.) G.L.Nesom"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029294-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ni51wg
title: Occurrence Download

description: A dataset containing 1733 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Spain",
 "Country is Portugal"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Senecio lividus L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1733 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049899-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cbdxxs
title: Occurrence Download

description: A dataset containing 1048 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 {
 "or" : [
 "Country is Italy",
 "Country is Greece",
 "Country is Morocco",
 "Country is France",
 "Country is Türkiye",
 "Country is Spain",
 "Country is Croatia",
 "Country is unknown or invalid",
 "Country is Ukraine"
 ]
 },
 "TaxonKey is Cistus creticus L."
 ]
}

 The dataset includes 1048 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041475-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lvdj9q
title: Occurrence Download

description: A dataset containing 137 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myrceugenia ovata var. gracilis (Burret) Landrum"
 ]
}

 The dataset includes 137 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012565-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q6vq4q
title: Occurrence Download

description: A dataset containing 20687 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Socratea exorrhiza (Mart.) H.Wendl."
 ]
}

 The dataset includes 20687 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026134-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8fdxuc
title: Occurrence Download

description: A dataset containing 146651 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Programme BioObs: observations naturalistes en milieux aquatiques-Observations de BioObs."
 ]
}

 The dataset includes 146651 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026142-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ydazk9
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio sericeonitens Speg."
 ]
}

 The dataset includes 86 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029291-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7liy7
title: Occurrence Download

description: A dataset containing 182571 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Felidae"
 ]
}

 The dataset includes 182571 records from 533 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001312-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xz72vh
title: Occurrence Download

description: A dataset containing 217772 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyprinus carpio Linnaeus, 1758",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 217772 records from 783 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076296-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ubnz2s
title: Occurrence Download

description: A dataset containing 694 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Daphnia lumholtzi Sars, 1885",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 694 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076299-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/ddf7f9fbabfa904cdacc642e198409f7
title: AGW01 Long-term measurement of groundwater physical and chemical properties from wells on watershed N04D at Konza Prairie

description: In 1988 and 1990, the U.S.Geological Survey, Lawrence, KS, drilled 31 wells at 20
 sites within the N04D watershed at the Konza Prairie Research Natural Area. The wells
 range in depth from about 2 to 13 meters, and are nested to include wells completed in
 alluvium/colluvium near the N04D drainage and in two Permian-aged limestone’s.
 In 1997, Konza LTER drilled an additional 4 wells at 3 sites, that range in depth from
 about 12 m to 37 m. The sites comprise four transects running approximately east-west
 across the drainage, and occupy the lower one-quarter of the surface area of the
 watershed. The geology of the area is characterized by patchy, near-stream
 alluvium/colluvium which overlies bedrock that is composed of thin (1-2 meter) limestones
 alternating with thicker (2-4 meter) shales. Beginning in 1990, water levels were measured
 and water samples collected quarterly. Since 1991, water levels have been measured and
 water samples for inorganic chemical analysis have been collected every four to six weeks;
 sample collection is by bailing wells after removing 1-2 well volumes of groundwater. The
 groundwater is then filtered through 0.45 micro; membrane filters by gravity feed or using
 a peristaltic pump. One 250-mL LDPE bottle is filled with 250 mL of sample and 5 mL of
 concentrated HNO3 for determination of major and minor cation concentrations. One 250-mL
 LDPE bottle is filled to the brim for anion determination by ion chromatography and
 alkalinity determination by titration with 0.02 N H2SO4. The bottles are stored on ice and
 later in a refrigerator.
DOI: 10.5281/zenodo.8383579
title: 2 million histological images of breast cancer tumors with her2 labels

description: Data Description
This is a 2 million set of non-overlapping image patches from hematoxylin & eosin (H&E) stained histological images of human breast cancer tumor tissue.


The anonymized dataset comes from a cohort of BC patients from the A. C. Camargo Cancer Center (ACCCC, N = 504). All patients were treated for breast cancer at the ACCCC between 2019 and 2021. As part of their diagnosis, in HER2 IHC score 2+ cases, patients' HER2 status was determined following the ASCO guidelines updated in 2018, with visual evaluation of IHC assay and either a FISH or DDISH test. All cases with metastasis or neoadjuvant treatment were excluded.


A total of 426 H&E stained high resolution images (40x magnification) were scanned from biopsy and resection tissue samples with a Leica Aperio AT2 scanner. Ethical approval of the ACCCC study was given by the ethics committee of the Fundação Antônio Prudente. We divided the cases into the following 3 groups according to the results of the IHC and ISH tests: HER2-negative, HER2-low and HER2-high.


The slides were divided into 256 px x 256 px tiles at 0.5 um/pixel magnification. Then, we used a custom trained ConvNext-tiny neural network to only include tiles from the tumor region and its environment, generating a total of 2051877 image patches.


A sample is considered her2-negative with an IHC score of 0; her2-low with an IHC score of 1+ or an IHC score of 2+ with a negative ISH-based test result, and her2-high with an IHC score of 2+ with a positive ISH-based test or an IHC score of 3+.


The accompanying code used for training the models is available at https://github.com/tojallab/wsi-mil
DOI: 10.5281/zenodo.8383580
title: 2 million histological images of breast cancer tumors with her2 labels

description: Data Description
This is a 2 million set of non-overlapping image patches from hematoxylin & eosin (H&E) stained histological images of human breast cancer tumor tissue.


The anonymized dataset comes from a cohort of BC patients from the A. C. Camargo Cancer Center (ACCCC, N = 504). All patients were treated for breast cancer at the ACCCC between 2019 and 2021. As part of their diagnosis, in HER2 IHC score 2+ cases, patients' HER2 status was determined following the ASCO guidelines updated in 2018, with visual evaluation of IHC assay and either a FISH or DDISH test. All cases with metastasis or neoadjuvant treatment were excluded.


A total of 426 H&E stained high resolution images (40x magnification) were scanned from biopsy and resection tissue samples with a Leica Aperio AT2 scanner. Ethical approval of the ACCCC study was given by the ethics committee of the Fundação Antônio Prudente. We divided the cases into the following 3 groups according to the results of the IHC and ISH tests: HER2-negative, HER2-low and HER2-high.


The slides were divided into 256 px x 256 px tiles at 0.5 um/pixel magnification. Then, we used a custom trained ConvNext-tiny neural network to only include tiles from the tumor region and its environment, generating a total of 2051877 image patches.


A sample is considered her2-negative with an IHC score of 0; her2-low with an IHC score of 1+ or an IHC score of 2+ with a negative ISH-based test result, and her2-high with an IHC score of 2+ with a positive ISH-based test or an IHC score of 3+.


The accompanying code used for training the models is available at https://github.com/tojallab/wsi-mil
DOI: 10.15468/dl.nbkwmn
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dilocarcinus pagei Stimpson, 1861",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 95 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076300-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/2915
title: Frame2
DOI: 10.15468/dl.th39gt
title: Occurrence Download

description: A dataset containing 916 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erythrinus erythrinus (Bloch & Schneider, 1801)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 916 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076301-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/2916
title: FM30K
DOI: 10.5281/zenodo.13351055
title: Data from Political Actors' Twitter Accounts Related to Transitional Justice
DOI: 10.5281/zenodo.13351056
title: Data from Political Actors' Twitter Accounts Related to Transitional Justice
DOI: 10.15468/dl.9aa4hs
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geophagus sveni Lucinda, Lucena & Assis, 2010",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 57 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076302-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.twhguz
title: Occurrence Download

description: A dataset containing 4641 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lithobates chiricahuensis (Platz & Mecham, 1979)"
 ]
}

 The dataset includes 4641 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076303-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fw22pk
title: Occurrence Download

description: A dataset containing 274 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gymnorhamphichthys hypostomus Ellis, 1912",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 274 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076304-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5csyha
title: Occurrence Download

description: A dataset containing 427 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chytridiomycota",
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Human Observation, Observation)"
 ]
}

 The dataset includes 427 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076305-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n4yxyu
title: Occurrence Download

description: A dataset containing 21311 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Toxostoma bendirei (Coues, 1873)"
 ]
}

 The dataset includes 21311 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076306-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.unqbvm
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gymnotus inaequilabiatus (Valenciennes, 1839)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 220 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076307-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6hp269
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gymnotus pantanal Fernandes, Albert, Daniel-Silva, Lopes, Crampton & Almeida-Toledo, 2005",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 116 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076308-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.