cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15879226
title: Datasets for the aTTN Cookbook

description: The files contain the datasets with the results of the manuscript The Augmented Tree Tensor Network Cookbook. All the datasets have been produced using the Quantum TEA software, with the user guide repository for running the simulations linked in the URL.

The dataset contains 7 folders:



raw_data_ising4numDE/ - square lattice Ising model benchmarks, energy and runtime for different number of disentanglers (DE)Subfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/gpu_symm5_sweeps{number-of-dmrg-sweeps}_numde{number-of-DE}/out/

raw_data_ising4extfields/ - square lattice Ising model benchmarks, energy and runtime for different external fieldsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_ising4bonddims/ - square lattice Ising model benchmarks, energy and runtime for different system sizes and bond dimensionsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/cpu+gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_ising_memories/ - square lattice Ising model benchmarks, max allocated GPU memory for different system sizes and bond dimensionsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/cpu+gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_ising_bestresult/ - square lattice Ising model benchmarks, energy and runtime for highest possible bond dimension over different external fieldsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/cpu+gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_ising4deoptsweeps/ - square lattice Ising model benchmarks, energy and runtime for different number of sweeps without disentanglersSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_heis4bonddims/ - triangular lattice Heisenberg model benchmarks, energy, runtime, and max allocated GPU memory for different system sizes and bond dimensionsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_D1.0000/cpu+gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/


 

Remark: symm5 in all folder names marks that the grond state search was ran without enforced symmetries, i.e. conserved quantities., gpu/cpu+gpu marks whether the simulation was run fully on a GPU or with the mixed device mode
DOI: 10.5281/zenodo.15879227
title: Datasets for the aTTN Cookbook

description: The files contain the datasets with the results of the manuscript The Augmented Tree Tensor Network Cookbook. All the datasets have been produced using the Quantum TEA software, with the user guide repository for running the simulations linked in the URL.

The dataset contains 7 folders:



raw_data_ising4numDE/ - square lattice Ising model benchmarks, energy and runtime for different number of disentanglers (DE)Subfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/gpu_symm5_sweeps{number-of-dmrg-sweeps}_numde{number-of-DE}/out/

raw_data_ising4extfields/ - square lattice Ising model benchmarks, energy and runtime for different external fieldsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_ising4bonddims/ - square lattice Ising model benchmarks, energy and runtime for different system sizes and bond dimensionsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/cpu+gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_ising_memories/ - square lattice Ising model benchmarks, max allocated GPU memory for different system sizes and bond dimensionsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/cpu+gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_ising_bestresult/ - square lattice Ising model benchmarks, energy and runtime for highest possible bond dimension over different external fieldsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/cpu+gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_ising4deoptsweeps/ - square lattice Ising model benchmarks, energy and runtime for different number of sweeps without disentanglersSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_g{external-field}/gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/

raw_data_heis4bonddims/ - triangular lattice Heisenberg model benchmarks, energy, runtime, and max allocated GPU memory for different system sizes and bond dimensionsSubfolder structure: {TN-ansatz}/Lx{size-along-x}_Ly{size-along-y}_chi{bond-dimension}_D1.0000/cpu+gpu_symm5_sweeps{number-of-dmrg-sweeps}_deopt{sweeps-without-DE}/out/


 

Remark: symm5 in all folder names marks that the grond state search was ran without enforced symmetries, i.e. conserved quantities., gpu/cpu+gpu marks whether the simulation was run fully on a GPU or with the mixed device mode
DOI: 10.3535/lzv-kmh-pts
title: Pterocephalus kurdicus Vatke

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/nb4-w0k-tw5
title: Agrostis stolonifera L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/xcx-0mx-c8e
title: Jurinea shahrestanica Rech. fil.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/4r0-v6r-zyg
title: Thinopyrum intermedium subsp. intermedium

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/897-ys9-dss
title: Thinopyrum intermedium subsp. intermedium

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/f1j-73r-cp9
title: Neslia paniculata (L.) Desv.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/lzx-tdx-zjt
title: Senecio icoglossus DC.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/dks-056-kct
title: Vernonanthura montevidensis (Spreng.) H. Rob.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/y4b-pj2-ttw
title: Bromus erectus Huds.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/7am-q29-tbl
title: Clinopodium nepeta subsp. nepeta

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/jc2-3w6-d3k
title: Siphocampylus macropodus (Thunb.) G.Don

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/7sy-mvh-bhf
title: Hieracium apricorum subsp. subpallescens (Beck) Gottschl.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/lh2-kw4-ekk
title: Hieracium apricorum subsp. subpallescens (Beck) Gottschl.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/8ec-sxz-h3t
title: Lappula squarrosa (Retz.) Dumort.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/e6l-v8w-4lb
title: Gamochaeta americana (Mill.) Wedd.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/s0a-xc8-tep
title: Jurinea radians subsp. variabilis (Aitch. & Hemsl.) Wagenitz

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/7d2-8yd-atz
title: Hieracium apricorum subsp. subpallescens (Beck) Gottschl.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ezl-efq-axd
title: Achyrocline satureioides (Lam.) DC.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/6zk-c21-sxv
title: Baccharis gnidiifolia Kunth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/b8m-vlf-8c3
title: Achyrocline satureioides (Lam.) DC.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/8bt-n4m-0q5
title: Achyrocline satureioides (Lam.) DC.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/rx6-j36-w63
title: Siphocampylus verticillatus (Cham.) G.Don

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.pf2c2c
title: Occurrence Download

description: A dataset containing 978084 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Circus cyaneus)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 978084 records from 2576 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072305-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vaef8p
title: Occurrence Download

description: A dataset listing the 363 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Canada",
 "OccurrenceStatus is Present",
 "StateProvince is Alberta (Prov.)",
 "TaxonKey is Fungi"
 ]
}

 The dataset's 363 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009731-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1396073.10fu
title: SH1396073.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1396075.10fu
title: SH1396075.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.17026/ar/uy8cei
title: Archeologisch bureauonderzoek tracé NuLelie- Garyp, gemeenten Tytsjerksteradiel, Leeuwarden en Smallingerland (FR)

description: Op basis van het de bestemmingsplannen, beleidskaarten en de ligging van bestaande kabels en leidingen is van de 47,6 km tracé in totaal 1.363 m tracé geselecteerd voor verder onderzoek, verdeeld over vijf deelgebieden. Deze gebieden concentreren zich in het noordelijk deel van het onderzoeksgebied en liggen allen in de gemeente Tytsjerksteradiel. De deelgebieden hebben een hoge archeologische verwachting op (met name) resten uit de steentijd en bronstijd. Ook zijn er enkele deelgebieden waar een kans is op het aantreffen van resten uit de middeleeuwen en nieuwe tijd.
DOI: 10.15156/bio/sh1396078.10fu
title: SH1396078.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1396079.10fu
title: SH1396079.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1396081.10fu
title: SH1396081.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.17026/ar/njxgs7
title: Archeologisch bureauonderzoek baggerwerkzaamheden Noord-Willemskanaal, gemeente Groningen (GR)

description: In het beekdal komen dekzandopduikingen voor in de vorm van beekduinen. In de lager gelegen omgeving – en later ook de opduikingen zelf – ontwikkelde zich in de loop van het Holoceen een veenmoeras, dat door de veranderende activiteit van de beek meermaals overspoeld kan zijn geweest. In de directe omgeving van het plangebied zijn op de dekzandopduikingen resten aangetroffen uit alle archeologische perioden. In het beekdal heerst een hoge verwachting voor bewoningsresten uit het laat-paleolithicum t/m het neolithicum op dekzandopduikingen. Daarbuiten geldt een hoge verwachting op sporen van watergerelateerde activiteit uit het laat-paleolithicum t/m het neolithicum, een hoge verwachting van watergerelateerde activiteit uit de bronstijd t/m de late middeleeuwen, een hoge verwachting op laatmiddeleeuwse veenterpen en een lage verwachting op ontginningssporen uit de nieuwe tijd. Het Noord-Willemskanaal is door dit landschap heen aangelegd. Een deel van het plangebied is rond 1400 uitgegraven. Het huidige Noord-Willemskanaal kreeg rond 1860 haar vorm. Het is zeer aannemelijk dat er bij het uitgraven van het kanaal archeologische resten zijn verstoord, die nog altijd in het huidige slib aanwezig kunnen zijn. Deze resten bevinden zich naar alle waarschijnlijkheid niet meer in situ en kunnen dan ook niet meer met zekerheid aan een archeologische context gekoppeld worden. Dit bureauonderzoek heeft echter gepoogd aan te geven wat zich op de bodem van het Noord-Willemskanaal zou kunnen bevinden. Het is echter niet mogelijk deze resten verder te onderzoeken.
DOI: 10.15156/bio/sh1396084.10fu
title: SH1396084.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1396086.10fu
title: SH1396086.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1396087.10fu
title: SH1396087.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1396089.10fu
title: SH1396089.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.17026/ar/jld89r
title: Archeologisch bureauonderzoek uitbreiding activiteitenarena Posta7 aan de Hoofdstraat 53 te Tolbert, gemeente Westerkwartier (GR)

description: Op basis van het onderzoek is vastgesteld dat het onderzoeksgebied op een grondmorenewelving ligt, in een gebied dat gedurende zeer lange tijd overveend is geweest (van de bronstijd tot en met de vroege nieuwe tijd). Indien archeologische resten in het onderzoeksgebied aanwezig zijn, dan dateren deze uit de steentijd. Er zijn echter geen aanwijzingen dat zich in het onderzoeksgebied een vuursteenvindplaats bevindt.