cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1640746.08fu
title: SH1640746.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1640747.08fu
title: SH1640747.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1640748.08fu
title: SH1640748.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1640749.08fu
title: SH1640749.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1640750.08fu
title: SH1640750.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5517/ccdc.csd.cc1znjv0
title: CCDC 1836993: Experimental Crystal Structure Determination

description: Related Article: Jun-Ling Jin, Yun-Peng Xie, Xing Lu|2018|Dalton Trans.|47|12972|doi:10.1039/C8DT02700E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1znjw1
title: CCDC 1836994: Experimental Crystal Structure Determination

description: Related Article: Jun-Ling Jin, Yun-Peng Xie, Xing Lu|2018|Dalton Trans.|47|12972|doi:10.1039/C8DT02700E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1znjx2
title: CCDC 1836995: Experimental Crystal Structure Determination

description: Related Article: Jun-Ling Jin, Yun-Peng Xie, Xing Lu|2018|Dalton Trans.|47|12972|doi:10.1039/C8DT02700E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1znjy3
title: CCDC 1836996: Experimental Crystal Structure Determination

description: Related Article: Jun-Ling Jin, Yun-Peng Xie, Xing Lu|2018|Dalton Trans.|47|12972|doi:10.1039/C8DT02700E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc203k5w
title: CCDC 1850457: Experimental Crystal Structure Determination

description: Related Article: Bibhuti Bhusan Rath, Goutam Kumar Kole, Jagadese J. Vittal|2018|Cryst.Growth Des.|18|6221|doi:10.1021/acs.cgd.8b01087
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc203k6x
title: CCDC 1850458: Experimental Crystal Structure Determination

description: Related Article: Bibhuti Bhusan Rath, Goutam Kumar Kole, Jagadese J. Vittal|2018|Cryst.Growth Des.|18|6221|doi:10.1021/acs.cgd.8b01087
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc203k7y
title: CCDC 1850459: Experimental Crystal Structure Determination

description: Related Article: Bibhuti Bhusan Rath, Goutam Kumar Kole, Jagadese J. Vittal|2018|Cryst.Growth Des.|18|6221|doi:10.1021/acs.cgd.8b01087
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc206w15
title: CCDC 1853646: Experimental Crystal Structure Determination

description: Related Article: Lathewdeipor Shadap, Nidhi Joshi, Krishna Mohan Poluri, Mohan Rao Kollipara, Werner Kaminsky|2018|Polyhedron|155|302|doi:10.1016/j.poly.2018.08.051
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc206w26
title: CCDC 1853647: Experimental Crystal Structure Determination

description: Related Article: Lathewdeipor Shadap, Nidhi Joshi, Krishna Mohan Poluri, Mohan Rao Kollipara, Werner Kaminsky|2018|Polyhedron|155|302|doi:10.1016/j.poly.2018.08.051
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25919/5b874d23b94e0
title: Parkes observations for project P892 semester 2018APRS_BPSR_47

description: SUPERBx looks at the highest Galactic latitudes in a search for pulsars and fast radio bursts (FRBs). We use optimised GPU codes and supercomputing to search for these, making discoveries in real time. Handling our data as it comes in is essential for the SKA Phase I era so this work applies directly to the high-data rates of next generation telescopes. Our pulsar discoveries are typically nearby scintillating sources, intermittent sources and those in interesting binary systems. Our FRB discoveries have discovery lags of ~1 second, rather than months/years and these feed rapid alerts to the world-wide follow-up community via a dedicated VOEvent format an Astronomer's Telegrams. The goal of this is to allow localisation of the discovered FRBs. This is key for identifying FRB host galaxies, so as to solve the mystery of their progenitors and to exploit their many uses as tools for precision cosmology measurements.
DOI: 10.5517/ccdc.csd.cc206vx0
title: CCDC 1853642: Experimental Crystal Structure Determination

description: Related Article: Lathewdeipor Shadap, Nidhi Joshi, Krishna Mohan Poluri, Mohan Rao Kollipara, Werner Kaminsky|2018|Polyhedron|155|302|doi:10.1016/j.poly.2018.08.051
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc206w04
title: CCDC 1853645: Experimental Crystal Structure Determination

description: Related Article: Lathewdeipor Shadap, Nidhi Joshi, Krishna Mohan Poluri, Mohan Rao Kollipara, Werner Kaminsky|2018|Polyhedron|155|302|doi:10.1016/j.poly.2018.08.051
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20kwl2
title: CCDC 1864234: Experimental Crystal Structure Determination

description: Related Article: Dong-Feng Chai|2018|CSD Communication|||
description: Related Article: Dongfeng Chai, Carlos J. Gómez-García, Bonan Li, Haijun Pang, Huiyuan Ma, Xinming Wang, Lichao Tan|2019|Chem.Eng.Journal|373|587|doi:10.1016/j.cej.2019.05.084
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20kwn4
title: CCDC 1864236: Experimental Crystal Structure Determination

description: Related Article: Dong-Feng Chai|2018|CSD Communication|||
description: Related Article: Dongfeng Chai, Carlos J. Gómez-García, Bonan Li, Haijun Pang, Huiyuan Ma, Xinming Wang, Lichao Tan|2019|Chem.Eng.Journal|373|587|doi:10.1016/j.cej.2019.05.084
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20kx7r
title: CCDC 1864254: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20kx8s
title: CCDC 1864255: Experimental Crystal Structure Determination

description: Related Article: Milan Gembicky|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20l0xk
title: CCDC 1864368: Experimental Crystal Structure Determination

description: Related Article: Milan Gembicky|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/j362v5x3nk.1
title: Public transport network and ridership data for 48 European metropolitan areas

description: Dataset of public transport network characteristics for 48 European metropolitan areas. Includes network characteristics and ridership split on public transport modes as well as various economic and urban characteristic collected from multiple data sources, which also are stated in the dataset.
DOI: 10.21227/qzf7-sj04
title: Vehicle driving behavior

description: The data format is described as follows:Event: {‘acc’: array([[x_axis], [y_axis], [z_axis], ‘gyr’,array([x_axis], [y_axis], [z_axis], ‘label’: No ]No =1 means acceleration.No =2 means normal driving.No =3 means collision.No =4 means left turn.No =5 means right turn.
DOI: 10.5281/zenodo.1406722
title: Processed Features In Support Of Liebeskind Et Al (2018)

description: Processed feature matrices used in Liebeskind et al. (2018). Supporting code: https://github.com/marcottelab/plum

Datasets 1 - 4 correspond to those used in Figure 4:

Dataset 1: No AP-MS, yeast CF-MS, training species: Human

Dataset 2: AP-MS, yeast CF-MS, training species: Human

Dataset 3: AP-MS, yeast CF-MS, training species: Human, Yeast

Dataset 4: AP-MS, no yeast CF-MS, training species: Human, Yeast

".train_labeled.missing_annotated.csv" files are those used for training the model and include only orthogroups for which interactions are known in the training species. These known interactions come either from gold-standard test sets, such as CORUM or EMBL's training portal, or from the fact that at least of the orthogroup pairs is missing in the focal taxon.

".missing_annotated.csv" files were used for prediction, and include the entire feature matrices, plus known missing pairs. Note that there is no dataset 3 file. This is because data sets 2 and 3 differ only in the training species used, so dataset 3 predictions used dataset2_07302018.missing_annotated.csv as a feature matrix.

dataset4_prediction_07302018.csv contains the predictions for all pairs on data set 4, the best performing data set that was used for all downstream analyses.
DOI: 10.5281/zenodo.1406723
title: Processed Features In Support Of Liebeskind Et Al (2018)

description: Processed feature matrices used in Liebeskind et al. (2018). Supporting code: https://github.com/marcottelab/plum

Datasets 1 - 4 correspond to those used in Figure 4:

Dataset 1: No AP-MS, yeast CF-MS, training species: Human

Dataset 2: AP-MS, yeast CF-MS, training species: Human

Dataset 3: AP-MS, yeast CF-MS, training species: Human, Yeast

Dataset 4: AP-MS, no yeast CF-MS, training species: Human, Yeast

".train_labeled.missing_annotated.csv" files are those used for training the model and include only orthogroups for which interactions are known in the training species. These known interactions come either from gold-standard test sets, such as CORUM or EMBL's training portal, or from the fact that at least of the orthogroup pairs is missing in the focal taxon.

".missing_annotated.csv" files were used for prediction, and include the entire feature matrices, plus known missing pairs. Note that there is no dataset 3 file. This is because data sets 2 and 3 differ only in the training species used, so dataset 3 predictions used dataset2_07302018.missing_annotated.csv as a feature matrix.

dataset4_prediction_07302018.csv contains the predictions for all pairs on data set 4, the best performing data set that was used for all downstream analyses.
DOI: 10.5517/ccdc.csd.cc1pg1pw
title: CCDC 1562638: Experimental Crystal Structure Determination

description: Related Article: Yan Fang, Yu-Ting Wang, Meng Zhao, Yan-Li Lu, Ming-Xue Li, Ya-Hong Zhang|2018|Polyhedron|155|254|doi:10.1016/j.poly.2018.08.049
description: Related Article: Yan Fang, Cuili Xing, Shixia Zhan, Meng Zhao, Mingxue Li, Hongling Liu|2019|J.Mater.Chem.B|7|1933|doi:10.1039/C8TB03331E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pg1qx
title: CCDC 1562639: Experimental Crystal Structure Determination

description: Related Article: Yan Fang, Yu-Ting Wang, Meng Zhao, Yan-Li Lu, Ming-Xue Li, Ya-Hong Zhang|2018|Polyhedron|155|254|doi:10.1016/j.poly.2018.08.049
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pg1ry
title: CCDC 1562640: Experimental Crystal Structure Determination

description: Related Article: Yan Fang, Yu-Ting Wang, Meng Zhao, Yan-Li Lu, Ming-Xue Li, Ya-Hong Zhang|2018|Polyhedron|155|254|doi:10.1016/j.poly.2018.08.049
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5255/ukda-sn-853203
title: How parents can help babies learn to talk with picture books 2016-2018
DOI: 10.5255/ukda-sn-853233
title: Supporting children's school readiness 2015-2018
DOI: 10.5517/ccdc.csd.cc1ppz2f
title: CCDC 1570245: Experimental Crystal Structure Determination

description: Related Article: Yao Du, Hui Su, Teng Fei, Baoping Hu, Jichuan Zhang, Shenghua Li, Siping Pang, Fude Nie|2018|Cryst.Growth Des.|18|5896|doi:10.1021/acs.cgd.8b00640
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pr7ym
title: CCDC 1571481: Experimental Crystal Structure Determination

description: Related Article: Yao Du, Hui Su, Teng Fei, Baoping Hu, Jichuan Zhang, Shenghua Li, Siping Pang, Fude Nie|2018|Cryst.Growth Des.|18|5896|doi:10.1021/acs.cgd.8b00640
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.