cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/rxcb6zpswj.1
title: Data for: Microstructure and failure processes of a reactor pressure vessel austenitic cladding

description: Data of fracture toughness tests presented in the paper.
DOI: 10.17632/w9925rszm2.1
title: Sarvodaya

description: It includes data from Gandhi's sarvodaya idea
DOI: 10.17632/m68gpy66yy.1
title: Genome-wide RNA structure changes during human neurogenesis modulate gene regulatory networks. Wang Jiaxu et al

description: The distribution, dynamics and function of RNA structures in human development is under-explored. Here, we systematically assayed RNA structural dynamics and its relationship with gene expression, translation and decay during human neurogenesis. We observed that the human ESC transcriptome is globally more structurally accessible than differentiated cells; and undergo extensive RNA structure changes, particularly in the 3’UTR. Additionally, RNA structure changes during differentiation is associated with translation and decay. We observed that RBP and miRNA binding is associated with RNA structural changes during early neuronal differentiation and splicing is associated during later neuronal differentiation. Further, our analysis suggest that RBPs are major factors in structure remodeling and co-regulate additional RBPs and miRNAs through structure. We demonstrated an example of this by showing that PUM2-induced structure changes on LIN28A enable miR-30 binding. This study deepens our understanding of the wide-spread and complex role of RNA-based gene regulation during human development.
DOI: 10.17632/kfcv24xryp.2
title: Openness to trade, Foreign direct investment, and economic growth in Vietnam

description: The data was collected from World Development Indicator (accessed on July 25th, 2021) for the context of Vietnam (1986-2020), including economic growth (constant 2010), FDI inflows, export, and import. 
The data was used to get the results in the manuscript. Any concerns about reproducing the results, feel free to contact the authors
DOI: 10.17632/y65hzhbfsk.1
title: Posidonia oceanica DMSP(O) data

description: The database provides contents of dimethylsulfoniopropionate (DMSP) and dimethylsulfoxide (DMSO) in leaf tissues of the seagrass Posidonia oceanica. Current knowledge on the production dynamics of these organosulfur coupounds in coastal and intertidal higher plants is minimal, or even almost non-existent for seagrasses. However, recent work on P. oceanica (and the present study) highlighted this species was the largest producer of DMSP and DMSO reported to date among coastal autotrophs, and most probably the major contributor to the dissolved DMSP and dimethyl sulphide (DMS) pools in coastal waters of the oligotrophic Mediterranean. The aim of this study was to gain a basic, in depth understanding of the natural variability of DMSP and DMSO in P. oceanica leaf tissues. This variability was studied (i) at seasonal and interannual time scales, (ii) with depth, (iii) in relation to the ageing of leaf tissues and (iv), in the context of ocean warming, with water temperature. Results showed that DMSP and DMSO production and content dynamics in P. oceanica were related to the plant biology/physiology, in particular to its growth cycle and productivity (varying over time and with depth). The modelled relationships with temperature would result from an indirect effect on molecules via seagrass growth. A notable characteristic was the constant ratio of the two molecule contents, indicative of a strong biochemical link between DMSP and DMSO in that species. Among the potential physiological roles played by these molecules, protection against oxidative stress, including thermal stress, seems likely.
DOI: 10.5281/zenodo.5524958
title: [Co III] versus Na I D in Type Ia supernova spectra

description: Model spectra from Dessart et al. 2014, MNRAS, 439, 3114. This also includes the input hydrodynamical model at 0.98 d past explosion.
DOI: 10.5281/zenodo.5524957
title: [Co III] versus Na I D in Type Ia supernova spectra

description: Model spectra from Dessart et al. 2014, MNRAS, 439, 3114. This also includes the input hydrodynamical model at 0.98 d past explosion.
DOI: 10.17632/k774bc6fkh.1
title: Arbitrage in cost-based redispatch: Evidence from Germany

description: This data allows for the replication of the paper: Schnaars, Perino (2021): Arbitrage in cost-based redispatch: Evidence from Germany
DOI: 10.17632/9zsfsk9439.3
title: AD ORTS - a NIST SP 800-22 standard based test suite for assessing the PRNG based on the fluctuations in an adsorption-desorption process

description: AD ORTS is a NIST SP 800-22 standard based test suite. It is designed for assessing the PRNG based on the fluctuations in an adsorption-desorption process.
DOI: 10.17632/j8jbt3wwsg.1
title: Supporting dataset for Cusinato et al., 2021, Winter Euro-Atlantic climate modes: Future Scenarios from a CMIP6 multi-model ensemble.

description: The datasets provide winter time-series of indices of major modes of Euro-Atlantic climate variability calculated for an ensemble of CMIP6 historical and ssp585 simulations. Indices include North Atlantic Oscillation (NAO), Eastern Atlantic pattern (EA), Eastern Atlantic Western Russian pattern (EAWR) and Scandinavian pattern (SCA). The indices have been computed from the 500hPa geopotential height (Z500) field and from the sea-level pressure field. 
Dataset are named according to the following criterion: ${index}_${level} where index=[NAO,EA,EAWR,SCA] and level=[Z500,SLP].
Each dataset is a NumPy array of size [46,249] corresponding to [simulations,time] where simulations refer to the 46 CMIP6 simulations (historical and ssp585) listed in the pdf document "CMIP6_simulations" and time refers to the period from 1851 to 2099 over which the indices time-series have been computed. The indices time-series of all the datasets have been standardized over the period 1980-2014.
DOI: 10.17632/dn7s3h786m.1
title: Controls on the nitrogen isotopic composition of fish otolith organic matter: Lessons from a controlled diet switch experiment

description: Research data used in our article "Controls on the nitrogen isotopic composition of fish otolith organic matter: Lessons from a controlled diet switch experiment".

Abstract
The nitrogen isotopes (δ15N) in the organic fraction of accretionary hard part structures, such as fish otoliths, may provide life histories of dietary change. We performed controlled experiments to validate the dynamics of isotope incorporation into biominerals following dietary shifts and also  compared whole-otolith and serial sampling approaches for diet reconstruction. Laboratory-reared Atlantic croaker (Micropogonias undulatus) were switched from a high quality, high δ15N diet (δ15N = 10.7‰) to one of two lower quality, lower δ15N diets (δ15N = 5.9 or 3.7‰). Using the oxidation-denitrifier method, including cleaning protocols required for fossil otoliths, we measured both otolith-bound δ15N (δ15Noto) of whole-otolith subsamples (δ15Nwhole) and sequentially micromilled otolith powders (δ15Nmicro) and compared these results to white muscle tissue (WMT) and liver δ15N obtained through traditional techniques. Both δ15Nwhole and δ15Nmicro recorded the diet switch, although sampling limitations muted the signal in δ15Nmicro, especially in the slowly growing otoliths of the fish on the lowest quality diet. The timescales at which otoliths and tissues approached the new δ15N after the diet switch varied, but the slowest was for WMT and the fastest was for liver. For δ15Nwhole, there were two factors: (1) the turnover time of the N provided to the otolith and (2) that the otolith is accreting and thus integrating over the entire life history of the fish. Using a model to account for the accretionary growth, turnover time for N supplying otolith growth ranged from 12 to 16 days. In both soft tissues and otoliths, the trophic discrimination factor (TDF, the δ15N elevation relative to diet) appears to have been lower in the larval fish, prior to the onset of the diet switches. This raises questions about the interpretation of the δ15Noto of otolith cores; however, the core is a small portion of the total otolith. We conclude that (1) δ15Nwhole is useful for tracking diet despite the whole-life integration of the δ15N signal and (2) δ15Nmicro also records diet, and higher resolution tracking may be possible with further optimization of δ15Nmicro sampling.
DOI: 10.17632/ps32wg67nd.1
title: Nefopam toxicity 

description: some parameters in Nefopam toxicity
DOI: 10.17632/5rrc89f2kj.1
title: Design and Fabrication of a Low-cost Wireless Camera Imaging System for Centrifugal Microfluidics

description: Centrifugal microfluidic devices offer a robust method for low volume fluid handling by combining low-cost instrumentation with highly integrated automation. Crucial to the efficacy of Lab-on-a-Disc (LoaD) device operation is the selection of robust valving technology, the design of on-disc fluidic structures, and accurate control of disc spin-speeds (centrifugal force) during operation. Generally, a fundamental understanding of fluid behaviour at the microlitre level is required to inform the design of on-disc fluidic structures. Therefore, iterative design optimisation of LoaD systems requires the ability to examine and measure the operation of discs during rotation. Scientific cameras, synchronised with a stroboscopic light, are typically employed to visualize on-disc unit operations by capturing synchronized images during rotation. This approach requires a motor/ encoder capable of generating a triggering pulse, a camera and strobe to receive it, and intermediate circuitry to connect the components. Depending on the system decisions taken, such systems can cost from €4,000 upwards. This paper outlines the development of a low-cost centrifugal test-stand with an imaging system using a generic wireless camera to record videos directly to a smartphone device. This imaging system can be fabricated using only 3D printers and a low-cost CNC milling machine from widely available materials for approximately €350. High-fidelity imaging of the entire disc for flow visualisation and the recording of real-time colour intensity measurements are facilitated by this standalone imaging device. A vibration analysis study has been performed to determine the rotational velocity range at which the system can be safely operated. Furthermore, the efficacy of the imaging system has been demonstrated by performing real-time colour intensity measurements of dyed water dilutions.
DOI: 10.17632/x2msm2rx32.2
title: Knowledge and Practice of Cattle Handlers on Antibiotic Residues in Meat and Milk in Kwara State, Northcentral Nigeria

description: Data on Knowledge and Practices of Cattle handlers on antibiotic residues in meat and milk in Kwara State, Northcentral, Nigeria
DOI: 10.17632/hybhjg885b.1
title: Loss-of-function variants in the schizophrenia risk gene SETD1A alter neuronal network activity in human neurons through cAMP/PKA pathway

description: Raw data file (with statistical information) for all the figures from this paper.
DOI: 10.17632/w2p5tztt6z.1
title: Topological vulnerability metrics with number of evaluations for different reliability evaluations methods

description: The following dataset supplements the research on finding the correlation of topological vulnerability metrics with the number of distinct OPF evaluations.
DOI: 10.17632/9tkgbfghyw.1
title: Impact of vitiligo on life quality of patients: Assessment of currently available tools

description: How different tools for evaluating the impacts of skin diseases on QoL reflect the burden of vitiligo has rarely been compared. In this study, we evaluated the impact of vitiligo on QoL using currently available tools. Patients with vitiligo completed established questionnaires including dermatology life quality index (DLQI), short form-36 (SF-36), and willingness to pay (WTP). Of the 143 patients enrolled, 34.6% were identified having significant mental stress by SF-36 mental health domain score ≤ 56 while there were only 13.3% patients with significantly hampered QoL indicated by DLQI > 10. Using receiver operating characteristic curve analysis, DLQI ≥7 was found to be a more appropriate DLQI cutoff value for identifying mental stress in vitiligo patients. Additionally, the median WTP for treating vitiligo was comparable to other inflammatory skin diseases. 
Conclusion: There exist discrepancies in the outcomes identifying significant disease burden of vitiligo using DLQI and SF-36, making the current DLQI cutoff score (> 10) for identifying significantly affected QoL inappropriate for these patients.
DOI: 10.17632/x53tts3zfr.4
title: Charting human development using a multi-organ atlas and organoid models

description: Organs are composed of diverse cell types, which traverse transient states during organogenesis. To interrogate this diversity during human development, we generate a single-cell transcriptome atlas from multiple developing endodermal organs of the respiratory and gastrointestinal tract. We illuminate cell states, transcription factors, and organ-specific epithelial stem cell and mesenchyme interactions across lineages. We implement the atlas as a high-dimensional search space to benchmark pluripotent stem cell-derived human intestinal organoids (HIOs) in multiple culture conditions. We show that HIOs recapitulate reference cell states, and use HIOs to reconstruct the molecular dynamics of intestinal epithelium and mesenchyme emergence. We show that the mesenchyme-derived niche cue NRG1 enhances intestinal stem cell maturation in vitro and that the homeobox transcription factor CDX2 is required for regionalization of intestinal epithelium and mesenchyme in humans. Collectively, this work combines cell atlases and organoid technologies to understand how human organ development is orchestrated. 

We provide following data here:
1. Data S1 referred in the main text, which includes cellular heterogeneity of the multi-organ atlas/tHIO/developing duodenum mesenchyme/HIO mesenchyme, expression of gastrointestinal (GI) disease-associated genes in developing intestine and tHIO, intestinal stem cell and mesenchymal signaling potential over development, and transcription factors related to intestine epithelial and mesenchymal development;
2. Processed sequencing data;
3. Fetal atlas CSS model, UMAP model and other data that we used for projection of organoid data to the developing atlas;
4. Intensity and list of cell type enriched epithelium-mesenchyme interactions in each organ reported by CellPhoneDB. Related to Figure 3;
5. Regulons associated with intestinal stem cell phase 4, 5 and 6. Related to Figure 5;
6. Reference patterns for novoSpaRc. Related to ExtData-6 of Data S1;
7. TF network module associated with in vitro HIO epithelial and mesenchymal development. Related to ExtData-8A;
8. Regulons of time course in vitro HIO mesenchymal cells and epithelial cells reported by pySCENIC. Related to ExtData-8G and Figure S7A.
DOI: 10.17632/w7thrrs9dh.1
title: Dataset and raw data for diagnostic characters of pterosaurs

description: Dataset and raw data for diagnostic characters of pterosaurs: Sheet 1 - Overall data (species and other basic data); Sheet 2 - Pterosaur genus and number of occurrences; Sheet 3 - Species diagnoses; Sheet 4 - Character frequencies in each pterosaur species. Sheet 5 – PCA variance and Eigenvalues. Sheet 6 – PCA scores for PC 1 to PC4. Sheet 7 - PCA factor loadings for PC1 to PC4.
DOI: 10.17632/5jcg5vfx58.3
title: The Moroccan Video Intelligent Transport System dataset for vehicle detection

description: Intelligent transportation systems (ITS) are composed of functionalities that aim to reduce traffic jams and detect anomalies. These functionalities include vehicle detection and classification that represent critical tasks and require a high degree of accuracy to ensure the extracted information's reliability. Therefore, we present a key data set related to the detection of vehicles in Morocco, nicknamed MoVITS. The data provided in this paper is collected using a stereo-based vision system, and it is useful for vehicle detection and classification by using different methods for many purposes. This data set is intended to support researchers, stakeholders, and the general public interested in ITS. The vehicle video dataset incorporated with deep learning, transfer learning, and fine-tuning can provide outstanding vehicle detection and classification results.
DOI: 10.5281/zenodo.5524963
title: A one-dimensional Chandrasekhar-mass delayed-detonation model for the broad-lined Type Ia supernova 2002bo

description: Multi-epoch spectra of model DDC15 used to confront to SN 2002bo observations from Blondin et al. 2015, MNRAS, 448, 2766. This also includes the input hydrodynamical model at 0.98 d past explosion.<br> <br> The optical and NIR passbands used to compute <em>UBVRIJHK<sub>s</sub></em> magnitudes are also available.
DOI: 10.5281/zenodo.5524962
title: A one-dimensional Chandrasekhar-mass delayed-detonation model for the broad-lined Type Ia supernova 2002bo

description: Multi-epoch spectra of model DDC15 used to confront to SN 2002bo observations from Blondin et al. 2015, MNRAS, 448, 2766. This also includes the input hydrodynamical model at 0.98 d past explosion.<br> <br> The optical and NIR passbands used to compute <em>UBVRIJHK<sub>s</sub></em> magnitudes are also available.
DOI: 10.6084/m9.figshare.16670545
title: Data Fig 6 and S9

description: Behavioral data Global KO and mHb KO
DOI: 10.6084/m9.figshare.16670533.v1
title: Data Fig 4, S6 and S7

description: Fig 4C, E, G-MFig S7
DOI: 10.6084/m9.figshare.16670542
title: Data Fig 5 and S8

description: Fig 5A,B, D,F,H and JFig S8D and E
DOI: 10.6084/m9.figshare.16670542.v1
title: Data Fig 5 and S8

description: Fig 5A,B, D,F,H and JFig S8D and E
DOI: 10.6084/m9.figshare.16670572
title: Data Fig S4

description: Fig S4D and EFig S4HFig S4GFigS4K
DOI: 10.6084/m9.figshare.16670533
title: Data Fig 4, S6 and S7

description: Fig 4C, E, G-MFig S7
DOI: 10.6084/m9.figshare.16670566
title: Data Fig S1

description: Fig S1BFig S1CFig S1E
DOI: 10.6084/m9.figshare.16670515
title: Data Fig 2 and S5

description: Fig 2B, D, F and HFig S5B, D and F
DOI: 10.6084/m9.figshare.16670515.v1
title: Data Fig 2 and S5

description: Fig 2B, D, F and HFig S5B, D and F
DOI: 10.6084/m9.figshare.16670527.v1
title: Data Fig 3

description: Fig 3B and D
DOI: 10.6084/m9.figshare.16670527
title: Data Fig 3

description: Fig 3B and D
DOI: 10.5281/zenodo.5524969
title: One-dimensional non-LTE time-dependent radiative transfer of an He-detonation model and the connection to faint and fast-decaying supernovae

description: Model spectra from Dessart & Hillier 2015, MNRAS, 447, 1370
DOI: 10.5281/zenodo.5524968
title: One-dimensional non-LTE time-dependent radiative transfer of an He-detonation model and the connection to faint and fast-decaying supernovae

description: Model spectra from Dessart & Hillier 2015, MNRAS, 447, 1370
DOI: 10.7303/syn26164848.1
title: Data.zip
DOI: 10.5281/zenodo.5524945
title: IODP Expedition 346, Hole U1423B - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 346: Asian Monsoon
DOI: 10.5281/zenodo.5524944
title: IODP Expedition 346, Hole U1423B - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 346: Asian Monsoon
DOI: 10.5281/zenodo.5524953
title: IODP Expedition 346, Hole U1425B - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 346: Asian Monsoon
DOI: 10.5281/zenodo.5524952
title: IODP Expedition 346, Hole U1425B - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 346: Asian Monsoon
DOI: 10.5281/zenodo.5524960
title: IODP Expedition 346, Hole U1430B - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 346: Asian Monsoon
DOI: 10.5281/zenodo.5524959
title: IODP Expedition 346, Hole U1430B - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 346: Asian Monsoon
DOI: 10.5281/zenodo.5524979
title: Numerical simulations of superluminous supernovae of type IIn

description: Model spectra and light curves from Dessart et al. 2015, MNRAS, 449, 4304.
DOI: 10.5281/zenodo.5524978
title: Numerical simulations of superluminous supernovae of type IIn

description: Model spectra and light curves from Dessart et al. 2015, MNRAS, 449, 4304.
DOI: 10.25625/vvskch/2okclf
title: Rfem_Afem01_annotations.csv

description: :unav
DOI: 10.25625/vvskch/cevtdu
title: Rfem_Afem02.npz

description: :unav
DOI: 10.25625/vvskch/jt8zln
title: Rfem_Afem02_annotations.csv

description: :unav
DOI: 10.25625/vvskch/cgfbhh
title: Rmale_Afem01.npz

description: :unav
DOI: 10.25625/vvskch/hphsgu
title: Rmale_Afem01_annotations.csv

description: :unav
DOI: 10.25625/vvskch/mehqn6
title: Rfem_Afem01.npz

description: :unav
DOI: 10.25625/vvskch
title: Mouse - train and test data

description: Contains recordings and manual annotations of ultrasonic vocalizations (USVs) of female and male residents towards an intruder mouse. Manual annotations were created for training and testing DAS. Original data source for the recordings:https://data.donders.ru.nl/collections/di/dcn/DSC_620840_0003_891?0 Original reference: Ivanenko A, Watkins P, Gerven MAJ van, Hammerschmidt K, Englitz B. 2020. Classifying sex and strain from mouse ultrasonic vocalizations using deep learning. PLOS Computational Biology 16:e1007918. USVs from a female resident towards a female intruder used for training and testing DAS: Rfem_Afem01_annotations.csv, Rfem_Afem01.npz Rfem_Afem02_annotations.csv, Rfem_Afem02.npz USVs from a male resident towards a female intruder used for testing generalization of the female-trained DAS model: Rmale_Afem01_annotations.csv, Rmale_Afem01.npz