cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7957244
title: Pediatric NAFLD: an overview and recent developments in diagnostics and treatment

description: <b>Introduction</b>: Non-alcoholic fatty liver disease (NAFLD) is the most common chronic liver disease in children and adults in industrialized countries. Besides liver-related morbidity, NAFLD is also associated with an increased risk of cardiovascular disease, type 2 diabetes and mortality at adult age. However, despite the high prevalence and serious complications, diagnosing and staging of disease remains complicated due to a lack of accurate screening tools and non-invasive methods to detect fibrosis. <b>Areas covered</b>: Recent insights in epidemiology, pathogenesis, diagnostic evaluation and treatment options in pediatric NAFLD are being reviewed, with a particular focus on new developments in diagnostic tools. <b>Expert opinion</b>: Due to their long life span, children with NAFLD are particularly at risk of complications in their lifetime. Therefore, an effective screening strategy for children to identify those with NAFLD at risk of complications is urgently needed. This is further underscored by new pharmacological therapies that are expected to become available in the next 5 years. Momentarily no accurate non-invasive method for diagnosing pediatric NAFLD is available. New promising biomarkers and imaging tools could hopefully provide better screening tools and could contribute to the development of a successful management plan to identify children with NAFLD.
DOI: 10.6084/m9.figshare.12878407.v3
title: Additional file of Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions

description: Additional file of Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions
DOI: 10.6084/m9.figshare.12878407.v4
title: Additional file of Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions

description: Additional file of Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions
DOI: 10.6084/m9.figshare.7957244.v1
title: Pediatric NAFLD: an overview and recent developments in diagnostics and treatment

description: <b>Introduction</b>: Non-alcoholic fatty liver disease (NAFLD) is the most common chronic liver disease in children and adults in industrialized countries. Besides liver-related morbidity, NAFLD is also associated with an increased risk of cardiovascular disease, type 2 diabetes and mortality at adult age. However, despite the high prevalence and serious complications, diagnosing and staging of disease remains complicated due to a lack of accurate screening tools and non-invasive methods to detect fibrosis. <b>Areas covered</b>: Recent insights in epidemiology, pathogenesis, diagnostic evaluation and treatment options in pediatric NAFLD are being reviewed, with a particular focus on new developments in diagnostic tools. <b>Expert opinion</b>: Due to their long life span, children with NAFLD are particularly at risk of complications in their lifetime. Therefore, an effective screening strategy for children to identify those with NAFLD at risk of complications is urgently needed. This is further underscored by new pharmacological therapies that are expected to become available in the next 5 years. Momentarily no accurate non-invasive method for diagnosing pediatric NAFLD is available. New promising biomarkers and imaging tools could hopefully provide better screening tools and could contribute to the development of a successful management plan to identify children with NAFLD.
DOI: 10.5281/zenodo.4000341
title: CROCCA-2S Perth Canyon Multibeam Survey (The squirrel survey)

description: Multi-beam survey of Perth Canyon (on board the R/V Thomas Thompson) as part of the Coring to Reconstruct Ocean Circulation and Carbon Dioxide Across 2 Seas (CROCCA-2S) research cruise.
DOI: 10.6084/m9.figshare.7957223
title: Conspicuous colours reduce predation rates in fossorial uropeltid snakes

description: Raw data used to analyze the predation rates on different coloured clay snake models placed in BBTC tea plantations, Tamil Nadu, India and the position of attacks on edible dough models by chickens in the captive bird experiment.
DOI: 10.6084/m9.figshare.7957145
title: Observation reports of acid rain collected on Mt. Tateyama (2018)

description: Acid rain observations were done at 10 observation points from Katsuradai (660 m a. s. l.) to Murodo-daira (2450 m a. s. l.) in Mt. Tateyama and Toyama Science Museum in Toyama city. Some rain collectors set at Mt. Tateyama had been turned over by the strong wind of the typhoon during observation periods in 2018. Precipitations were increased with the rise in altitude (altitude effect). Concentrations of nitrate ions were decreased with the rise in altitude (altitude effect). However, it was observed during July to September that concentrations of non-sea salt sulfate ion increased with rise in altitude. Concentrations of ammonium ions at observation points of Mt. Tateyama were fluctuated in July and August though that concentrations showed altitude effect like as nitrate ion in September and October. These phenomena were similar to observations in 2017. Value of pH was the lowest at observation point of Murodou-daira in July and August. It was considered that the lowest pH at Murodou-daira was due to transported acidic constituent from the Asian Continent, because nitrate contribution ratio was the lowest. Number concentrations of suspended particles in precipitation collected at Oiwake (1800 m a. s. l.) from 18 to 29, August were the highest from other observation points, and sample water seemed pale yellow. These particles might be due to the Asian dust.
DOI: 10.6084/m9.figshare.7957223.v1
title: Conspicuous colours reduce predation rates in fossorial uropeltid snakes

description: Raw data used to analyze the predation rates on different coloured clay snake models placed in BBTC tea plantations, Tamil Nadu, India and the position of attacks on edible dough models by chickens in the captive bird experiment.
DOI: 10.6084/m9.figshare.7957142
title: SHRIMP U–Pb phosphate dating shows metamorphism was synchronous with magmatism during the Paleoproterozoic Capricorn Orogeny

description: Unlike many Phanerozoic orogens, where the primary effects of orogenic events can be easily determined, Precambrian orogens are commonly characterised by repeated tectonothermal events making it challenging to decipher the geological history. The Capricorn Orogen is a complex Precambrian intraplate orogen located within the West Australian Craton that has been subjected to four separate reworking tectonic events between 1820 and 900 Ma. Although direct U–Pb ages for metamorphism have been obtained for the younger events, there is only limited geochronological data for the oldest event, the 1820–1770 Ma Capricorn Orogeny. This is primarily because of multiple episodes of deformation and metamorphism overprinting and obscuring the original tectonic fabrics and destroying metamorphic chronometers. In this study, we use <i>in situ</i> U–Pb monazite and xenotime geochronology, from a feldspathic metasandstone, a quartz–muscovite–chlorite–garnet pelitic schist, a quartz–muscovite–tourmaline schist and a garnet–biotite–plagioclase pelitic gneiss, to obtain the first direct age constraints for metamorphism during the Capricorn Orogeny in the northern Gascoyne Province. Metamorphism was synchronous with the 1820–1775 Ma magmatism in the northern part, and possibly in the southern part, of the Gascoyne Province. Furthermore, our results hint at a late stage hydrothermal fluid event at <i>ca</i> 1750–1730 Ma, post-dating the magmatism in the northern Gascoyne Province.
DOI: 10.6084/m9.figshare.7957049
title: Article Processing Charge Hyperinflation and Price Insensitivity: An Open Access Sequel to the Serials Crisis

description: Dataset for a paper in LIBER Quarterly on price sensitivity and open access article processing charges. This data demonstrates that introducing or increasing and APC does not reduce the number of articles a journal publishes.<br>Data is available in a variety of formats to ensure compatibility, including GraphPad Prism (.pzfx and .xml), Excel (.xlsx.), and comma separated values (UTF-8 encoding; .csv).<br>
DOI: 10.6084/m9.figshare.7957142.v1
title: SHRIMP U–Pb phosphate dating shows metamorphism was synchronous with magmatism during the Paleoproterozoic Capricorn Orogeny

description: Unlike many Phanerozoic orogens, where the primary effects of orogenic events can be easily determined, Precambrian orogens are commonly characterised by repeated tectonothermal events making it challenging to decipher the geological history. The Capricorn Orogen is a complex Precambrian intraplate orogen located within the West Australian Craton that has been subjected to four separate reworking tectonic events between 1820 and 900 Ma. Although direct U–Pb ages for metamorphism have been obtained for the younger events, there is only limited geochronological data for the oldest event, the 1820–1770 Ma Capricorn Orogeny. This is primarily because of multiple episodes of deformation and metamorphism overprinting and obscuring the original tectonic fabrics and destroying metamorphic chronometers. In this study, we use <i>in situ</i> U–Pb monazite and xenotime geochronology, from a feldspathic metasandstone, a quartz–muscovite–chlorite–garnet pelitic schist, a quartz–muscovite–tourmaline schist and a garnet–biotite–plagioclase pelitic gneiss, to obtain the first direct age constraints for metamorphism during the Capricorn Orogeny in the northern Gascoyne Province. Metamorphism was synchronous with the 1820–1775 Ma magmatism in the northern part, and possibly in the southern part, of the Gascoyne Province. Furthermore, our results hint at a late stage hydrothermal fluid event at <i>ca</i> 1750–1730 Ma, post-dating the magmatism in the northern Gascoyne Province.
DOI: 10.6084/m9.figshare.12878416
title: Additional file 1 of Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions

description: Additional file 1:Significance analysis of the microarray results. Significant differentially expressed genes in the microarray, determined by SAM [27]. (XLS 206 KB)
DOI: 10.6084/m9.figshare.12878416.v1
title: Additional file 1 of Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions

description: Additional file 1:Significance analysis of the microarray results. Significant differentially expressed genes in the microarray, determined by SAM [27]. (XLS 206 KB)
DOI: 10.6084/m9.figshare.12878419.v1
title: Additional file 2 of Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions

description: Additional file 2:ATCC 17978 FUR binding sites. A list of putative FUR binding sites in the A. baumannii ATCC 17978 genome determined by MAST with E &lt; 100. (XLS 30 KB)
DOI: 10.6084/m9.figshare.12878419
title: Additional file 2 of Investigation of the human pathogen Acinetobacter baumannii under iron limiting conditions

description: Additional file 2:ATCC 17978 FUR binding sites. A list of putative FUR binding sites in the A. baumannii ATCC 17978 genome determined by MAST with E &lt; 100. (XLS 30 KB)
DOI: 10.6084/m9.figshare.7956737
title: Additional file 9: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: Splice-site variants with their corresponding HSF and MaxEnt Scores from Human Splicing Finder 3.0. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7956728
title: Additional file 8: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: List with genes presenting a PDAV in three (or more) BC patients but not (or only once) in the control samples. GO annotations are shown for molecular function, biological processes and Reactome Pathways. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7956737.v1
title: Additional file 9: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: Splice-site variants with their corresponding HSF and MaxEnt Scores from Human Splicing Finder 3.0. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.12878443.v7
title: Additional file of High-throughput 454 resequencing for allele discovery and recombination mapping in Plasmodium falciparum

description: Additional file of High-throughput 454 resequencing for allele discovery and recombination mapping in Plasmodium falciparum
DOI: 10.6084/m9.figshare.7956719
title: Additional file 7: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: List with all genes (exome-wide) presenting a PDAV in at least two BC patients and the number of control samples presenting a PDAV in the same gene. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.7956728.v1
title: Additional file 8: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: List with genes presenting a PDAV in three (or more) BC patients but not (or only once) in the control samples. GO annotations are shown for molecular function, biological processes and Reactome Pathways. (XLSX 13 kb)
DOI: 10.5258/soton/d1519
title: Research Data - Machine Learning Assisted Adaptive Index Modulation for mmWave Communications

description: This dataset supports the publication on IEEE Open Journal of the Communications Society, which title is 'Machine Learning Assisted Adaptive Index Modulation for mmWave Communications'. This dataset contains Figure 2, 6, 7, 8, 10, 12, 13, 14, 15, 16, 17 and 18 of the aforementioned paper. Each folder is named according to its content, where the curves of each figure are stored in mat files.
DOI: 10.6084/m9.figshare.7956719.v1
title: Additional file 7: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: List with all genes (exome-wide) presenting a PDAV in at least two BC patients and the number of control samples presenting a PDAV in the same gene. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.7956710
title: Additional file 6: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: BC patients vs. controls variant types enrichment in exome- and CAGP-wide. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7956704
title: Additional file 5: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: Types and number of variants detected (exome- and CAGP-wide) before and after variant filtration in each BC patient and control. (XLSX 32 kb)
DOI: 10.6084/m9.figshare.7956710.v1
title: Additional file 6: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: BC patients vs. controls variant types enrichment in exome- and CAGP-wide. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7956698
title: Additional file 4: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: Sequencing coverage details for each BC patient and control. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7956704.v1
title: Additional file 5: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: Types and number of variants detected (exome- and CAGP-wide) before and after variant filtration in each BC patient and control. (XLSX 32 kb)
DOI: 10.6084/m9.figshare.7956695
title: Additional file 3: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: A panel of cancer-associated genes with their corresponding genomic coordinates and the lists of genes from which they are extracted. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.7956698.v1
title: Additional file 4: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: Sequencing coverage details for each BC patient and control. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7956695.v1
title: Additional file 3: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: A panel of cancer-associated genes with their corresponding genomic coordinates and the lists of genes from which they are extracted. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.7956686
title: Additional file 1: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: Breast cancer (BC) patients considered for the study, their age at diagnosis and the number of affected first-degree relatives in their families. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7956680
title: Additional file 11: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: PDAVs found in the CAPG of the 120 control samples and their occurrence in the general population. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.7956686.v1
title: Additional file 1: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: Breast cancer (BC) patients considered for the study, their age at diagnosis and the number of affected first-degree relatives in their families. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7956680.v1
title: Additional file 11: of Identification of candidate cancer predisposing variants by performing whole-exome sequencing on index patients from BRCA1 and BRCA2-negative breast cancer families

description: PDAVs found in the CAPG of the 120 control samples and their occurrence in the general population. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.7956662
title: Additional file 2: of Endothelial cell-derived nidogen-1 inhibits migration of SK-BR-3 breast cancer cells

description: Table S1. List of proteins identified by MS-SILAC. Proteins identified with at least 1 unique peptide and quantified with a minimum of two ratio counts were considered for the analysis. For each experiment (forward and reverse), the SILAC ratios (sub-confluent/confluent cells) are given. NaNâ =â Not a Number. (XLSX 328 kb)
DOI: 10.6084/m9.figshare.7956662.v1
title: Additional file 2: of Endothelial cell-derived nidogen-1 inhibits migration of SK-BR-3 breast cancer cells

description: Table S1. List of proteins identified by MS-SILAC. Proteins identified with at least 1 unique peptide and quantified with a minimum of two ratio counts were considered for the analysis. For each experiment (forward and reverse), the SILAC ratios (sub-confluent/confluent cells) are given. NaNâ =â Not a Number. (XLSX 328 kb)
DOI: 10.6084/m9.figshare.7956629
title: MOESM2 of Functional analysis of the secondary HIV-1 capsid binding site in the host protein cyclophilin A

description: Additional file 2. Tables of SPR sensorgram data.
DOI: 10.6084/m9.figshare.7956629.v1
title: MOESM2 of Functional analysis of the secondary HIV-1 capsid binding site in the host protein cyclophilin A

description: Additional file 2. Tables of SPR sensorgram data.
DOI: 10.6084/m9.figshare.7956554
title: MOESM3 of Identification and characterization of CircRNAs involved in the regulation of wheat root length

description: Additional file 3: Table S3. List of differentially expressed circRNAs (DECs) in the YN29-XN979 comparison.
DOI: 10.6084/m9.figshare.7956548
title: MOESM2 of Identification and characterization of CircRNAs involved in the regulation of wheat root length

description: Additional file 2: Table S2. List of differentially expressed circRNAs (DECs) in the YN29-LH9 comparison.
DOI: 10.6084/m9.figshare.7956554.v1
title: MOESM3 of Identification and characterization of CircRNAs involved in the regulation of wheat root length

description: Additional file 3: Table S3. List of differentially expressed circRNAs (DECs) in the YN29-XN979 comparison.
DOI: 10.6084/m9.figshare.7956542
title: MOESM1 of Identification and characterization of CircRNAs involved in the regulation of wheat root length

description: Additional file 1: Table S1. Primers used for real-time PCR.
DOI: 10.6084/m9.figshare.7956548.v1
title: MOESM2 of Identification and characterization of CircRNAs involved in the regulation of wheat root length

description: Additional file 2: Table S2. List of differentially expressed circRNAs (DECs) in the YN29-LH9 comparison.
DOI: 10.6084/m9.figshare.7956542.v1
title: MOESM1 of Identification and characterization of CircRNAs involved in the regulation of wheat root length

description: Additional file 1: Table S1. Primers used for real-time PCR.
DOI: 10.6084/m9.figshare.7956500
title: MOESM1 of Vector competence, vectorial capacity of Nyssorhynchus darlingi and the basic reproduction number of Plasmodium vivax in agricultural settlements in the Amazonian Region of Brazil

description: Additional file 1. Distribution of malaria according to epidemiological week (EPI) in five municipalities of the Amazonian states, 2014â 2018, Brazil.
DOI: 10.6084/m9.figshare.7956500.v1
title: MOESM1 of Vector competence, vectorial capacity of Nyssorhynchus darlingi and the basic reproduction number of Plasmodium vivax in agricultural settlements in the Amazonian Region of Brazil

description: Additional file 1. Distribution of malaria according to epidemiological week (EPI) in five municipalities of the Amazonian states, 2014â 2018, Brazil.
DOI: 10.6084/m9.figshare.12878537.v5
title: Additional file of Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation

description: Additional file of Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation
DOI: 10.6084/m9.figshare.12878537.v6
title: Additional file of Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation

description: Additional file of Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation
DOI: 10.6084/m9.figshare.12878552.v1
title: Additional file 3 of Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation

description: Additional file 3:Table S1: Transcripts over-expressed in IVM oocytes compared to immature oocytes (GV). (XLS 169 KB)
DOI: 10.6084/m9.figshare.12878555
title: Additional file 4 of Sequential analysis of global gene expression profiles in immature and in vitro matured bovine oocytes: potential molecular markers of oocyte maturation

description: Additional file 4:Table S2: Transcripts under-expressed in IVM oocytes compared to immature oocytes (GV). (XLS 378 KB)