cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28719044
title: Supplemental Data for Babicheva et al. "Store-operated Ca<sup>2+</sup> entry is involved in endothelium-to-mesenchymal transition in lung vascular endothelial cells"

description: Endothelial-to-mesenchymal transition (EndMT) is a biological process that converts endothelial cells to mesenchymal cells with increased proliferative and migrative abilities. EndMT has been implicated in the development of pulmonary vascular remodeling in pulmonary arterial hypertension (PAH), a fatal and progressive lung vascular disease. Transforming growth factor β<sub>1</sub> (TGF-β<sub>1</sub>), an inflammatory cytokine, is known to induce EndMT in many types of endothelial cells including lung vascular endothelial cells (LVEC). An increase in cytosolic free Ca<sup>2+</sup> concentration ([Ca<sup>2+</sup>]<sub>cyt</sub>) is a major stimulus for cellular proliferation and phenotypic transition, but it is unknown whether Ca<sup>2+</sup> signaling is involved in EndMT. In this study we tested the hypothesis that TGF-β<sub>1</sub>-induced EndMT in human LVEC is Ca<sup>2+</sup>-dependent. Treatment of LVEC with TGF-β<sub>1</sub> for 5-7 days resulted in increase in SNAI1/2 expression, induction of EndMT, upregulation of STIM/Orai1 and enhancement of store-operated Ca<sup>2+</sup> entry (SOCE). Removal (or chelation) of extracellular or intracellular Ca<sup>2+</sup> with EGTA or BAPTA-AM respectively abolished EndMT in response to TGF-β<sub>1</sub>. Moreover, EGTA diminished TGF-β<sub>1</sub>-induced increase in SNAI in a dose-dependent manner. Knockdown of either STIM1 or Orai1 was sufficient to prevent TGF-β-mediated increase in SNAI1/2 and EndMT, but did not rescue the continuous adherent junctions. Blockade of Orai1 channels by AnCoA4 inhibited TGF-β-mediated EndMT and restored PECAM1-positive continuous adherent junctions. In conclusion, intracellular Ca<sup>2+</sup> signaling plays a critical role in TGF-β-associated EndMT through enhanced SOCE and STIM1-Orai1 interaction. Thus, targeting Ca<sup>2+</sup> signaling pathways regulating EndMT may be a novel therapeutic approach to treat PAH and other forms of pre-capillary pulmonary hypertension.
DOI: 10.6084/m9.figshare.28719044.v1
title: Supplemental Data for Babicheva et al. "Store-operated Ca<sup>2+</sup> entry is involved in endothelium-to-mesenchymal transition in lung vascular endothelial cells"

description: Endothelial-to-mesenchymal transition (EndMT) is a biological process that converts endothelial cells to mesenchymal cells with increased proliferative and migrative abilities. EndMT has been implicated in the development of pulmonary vascular remodeling in pulmonary arterial hypertension (PAH), a fatal and progressive lung vascular disease. Transforming growth factor β<sub>1</sub> (TGF-β<sub>1</sub>), an inflammatory cytokine, is known to induce EndMT in many types of endothelial cells including lung vascular endothelial cells (LVEC). An increase in cytosolic free Ca<sup>2+</sup> concentration ([Ca<sup>2+</sup>]<sub>cyt</sub>) is a major stimulus for cellular proliferation and phenotypic transition, but it is unknown whether Ca<sup>2+</sup> signaling is involved in EndMT. In this study we tested the hypothesis that TGF-β<sub>1</sub>-induced EndMT in human LVEC is Ca<sup>2+</sup>-dependent. Treatment of LVEC with TGF-β<sub>1</sub> for 5-7 days resulted in increase in SNAI1/2 expression, induction of EndMT, upregulation of STIM/Orai1 and enhancement of store-operated Ca<sup>2+</sup> entry (SOCE). Removal (or chelation) of extracellular or intracellular Ca<sup>2+</sup> with EGTA or BAPTA-AM respectively abolished EndMT in response to TGF-β<sub>1</sub>. Moreover, EGTA diminished TGF-β<sub>1</sub>-induced increase in SNAI in a dose-dependent manner. Knockdown of either STIM1 or Orai1 was sufficient to prevent TGF-β-mediated increase in SNAI1/2 and EndMT, but did not rescue the continuous adherent junctions. Blockade of Orai1 channels by AnCoA4 inhibited TGF-β-mediated EndMT and restored PECAM1-positive continuous adherent junctions. In conclusion, intracellular Ca<sup>2+</sup> signaling plays a critical role in TGF-β-associated EndMT through enhanced SOCE and STIM1-Orai1 interaction. Thus, targeting Ca<sup>2+</sup> signaling pathways regulating EndMT may be a novel therapeutic approach to treat PAH and other forms of pre-capillary pulmonary hypertension.
DOI: 10.15468/dl.dn55yn
title: Occurrence Download

description: A dataset containing 198 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyperus submicrolepis Kük.",
 "Continent is Africa"
 ]
}

 The dataset includes 198 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000811-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b6svva
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Acanthurus coeruleus",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Material sample)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000812-250402121839773/datasets/export for details.
DOI: 10.5281/zenodo.15127346
title: POS-MEE Experiments 1-3

description: Cleaned, anonymized data supporting "The 'multiple exposure effect' (MEE): How multiple exposures to similarly biased online content can cause increasingly larger shifts in opinions and voting preferences."
DOI: 10.5281/zenodo.15127347
title: POS-MEE Experiments 1-3

description: Cleaned, anonymized data supporting "The 'multiple exposure effect' (MEE): How multiple exposures to similarly biased online content can cause increasingly larger shifts in opinions and voting preferences."
DOI: 10.15468/3xbzpo
title: Base de datos sobre la flora de Durango

description: La falta de una infraestructura adecuada que ha frenado el crecimiento del herbario del Centro Interdisciplinario de Investigación para el Desarrollo Integral Regional (CIIDIR), unidad Durango, ha sido parcialmente subsanada con el desarrollo de este proyecto, apoyado por la CONABIO, que culminó con la entrega de una base de datos que contiene información de un total de 8,577 ejemplares, correspondientes a 1,843 especies vegetales. Para alcanzar su objetivo los responsables de este proyecto actualizaron la colección de especímenes botánicos del herbario mencionado, mediante la determinación taxonómica de los especímenes, y sistematizaron la información contenida en dicho herbario y en otras fuentes de datos sobre la flora de Durango, mediante la captura de la misma en una base de datos computarizada.Reino: 2
Filo: 2
Clase: 6
Orden: 52
Familia: 156
Género: 715
Subgénero: 20
Especie: 2004
Epitetoinfraespecifico: 193
DOI: 10.3886/e224741
title: People-First, Value-Centered (PFVC) Leadership Behaviors Survey: A Novel Instrument for Assessing Idealized Leadership Practices

description: As workforce expectations shift toward purpose, belonging, and meaningful engagement, leadership assessment tools must evolve. This study introduces the People-First, Value-Centered (PFVC) Leadership Behaviors Survey, a new instrument assessing leadership through two key constructs: People-First (empathy, empowerment, relationship-building) and Value-Centered (accountability, role modeling, transparency, vision, stewardship). Grounded in transformational and servant leadership theories, the PFVC survey explores the motivations behind leadership behaviors.
A quantitative pilot study with 394 U.S.-based employees validated the survey. Exploratory Factor Analysis (EFA) and Principal Component Analysis (PCA) confirmed strong construct validity, with factors explaining over 70% of variance. Reliability was high (Cronbach’s alpha: 0.896 for People-First, 0.860 for Value-Centered). Correlations with Bass & Avolio’s (1995) Multifactor Leadership Questionnaire further validated its effectiveness.
The PFVC survey offers a fresh approach to leadership assessment, aligning behaviors with employee expectations. With applications across industries like healthcare and juvenile justice, future research will expand its validation and impact on organizational success.
description: Presence of Common Scales: Likert Scale<br>1 = never,
2 = not often, 3 = sometimes, 4 = often, and 5 = always<br>
description: 394 Mechanical Turk (MTurk) workers based in the United States. The inclusion criteria consisted of individuals who were at least 18 years of age, employed full-time, part-time, retired, or contracted employees.
description: Smallest Geographic Unit: United States
description: web-based survey;
DOI: 10.3886/e224741v1
title: People-First, Value-Centered (PFVC) Leadership Behaviors Survey: A Novel Instrument for Assessing Idealized Leadership Practices

description: As workforce expectations shift toward purpose, belonging, and meaningful engagement, leadership assessment tools must evolve. This study introduces the People-First, Value-Centered (PFVC) Leadership Behaviors Survey, a new instrument assessing leadership through two key constructs: People-First (empathy, empowerment, relationship-building) and Value-Centered (accountability, role modeling, transparency, vision, stewardship). Grounded in transformational and servant leadership theories, the PFVC survey explores the motivations behind leadership behaviors.
A quantitative pilot study with 394 U.S.-based employees validated the survey. Exploratory Factor Analysis (EFA) and Principal Component Analysis (PCA) confirmed strong construct validity, with factors explaining over 70% of variance. Reliability was high (Cronbach’s alpha: 0.896 for People-First, 0.860 for Value-Centered). Correlations with Bass & Avolio’s (1995) Multifactor Leadership Questionnaire further validated its effectiveness.
The PFVC survey offers a fresh approach to leadership assessment, aligning behaviors with employee expectations. With applications across industries like healthcare and juvenile justice, future research will expand its validation and impact on organizational success.
description: Presence of Common Scales: Likert Scale<br>1 = never,
2 = not often, 3 = sometimes, 4 = often, and 5 = always<br>
description: 394 Mechanical Turk (MTurk) workers based in the United States. The inclusion criteria consisted of individuals who were at least 18 years of age, employed full-time, part-time, retired, or contracted employees.
description: Smallest Geographic Unit: United States
description: web-based survey;
DOI: 10.15468/dl.gku8hr
title: Occurrence Download

description: A dataset containing 1938 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyperus tenuiculmis Boeckeler",
 "Continent is Africa"
 ]
}

 The dataset includes 1938 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000813-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14933902
title: pQTL-mapping-rev1

description: Contains code to replicate genetic mapping and figures for pQTN manuscript (submitted; pre-print on bioRxiv):

https://www.biorxiv.org/content/10.1101/2024.10.18.619054v1

 

plotting_master_script.m will generate the figures in the manuscript. Specify your local code_directory, desired output_directory for the figure files, and download the dependencies and specify the dependency_directory to run the script.

 

Also included are functions and example Snakemake file for pQTN mapping on SWATH-MS data.
DOI: 10.5281/zenodo.14933903
title: pQTL-mapping-rev1

description: Contains code to replicate genetic mapping and figures for pQTN manuscript (submitted; pre-print on bioRxiv):

https://www.biorxiv.org/content/10.1101/2024.10.18.619054v1

 

plotting_master_script.m will generate the figures in the manuscript. Specify your local code_directory, desired output_directory for the figure files, and download the dependencies and specify the dependency_directory to run the script.

 

Also included are functions and example Snakemake file for pQTN mapping on SWATH-MS data.
DOI: 10.15468/dl.x3daut
title: Occurrence Download

description: A dataset containing 192 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "Geometry POLYGON((-42.78069 -8.82213,-42.70547 -8.85916,-42.52959 -8.86032,-42.32593 -8.72725,-42.31783 -8.58376,-42.42429 -8.67286,-42.5724 -8.48656,-42.70547 -8.50507,-42.78069 -8.82213))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fabaceae"
 ]
}

 The dataset includes 192 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000815-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c6aejr
title: Occurrence Download

description: A dataset containing 11656 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Machine Observation)",
 "Country is one of (United States of America, Canada)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Orcinus orca (Linnaeus, 1758)"
 ]
}

 The dataset includes 11656 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000814-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4hdkx3
title: Occurrence Download

description: A dataset containing 317516 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "OccurrenceStatus is Present",
 "TaxonKey is Primates"
 ]
}

 The dataset includes 317516 records from 708 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000798-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.56qm8h
title: Occurrence Download

description: A dataset containing 31196294 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 31196294 records from 2894 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000751-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.at5iip
title: Occurrence Download

description: A dataset containing 2518 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Solidago altissima L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2518 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045782-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xhgysw
title: Occurrence Download

description: A dataset containing 13444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum angustifolium Houst. ex Mill.",
 "HasCoordinate is True"
 ]
}

 The dataset includes 13444 records from 310 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044455-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qk4utr
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ricania simulans (Walker, 1851)"
 ]
}

 The dataset includes 119 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0142949-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ujk4ek
title: Occurrence Download

description: A dataset containing 3826 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spiranthes sinensis (Pers.) Ames",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3826 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080419-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zqdauj
title: Occurrence Download

description: A dataset containing 454 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Solidago fistulosa Mill.",
 "TaxonKey is Symphocladia marchantioides (Harv.) Falkenberg"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 454 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045783-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e63yps
title: Occurrence Download

description: A dataset listing the 10373 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is EOD – eBird Observation Dataset"
 ]
}

 The dataset's 10373 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000071-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.chjxal
title: Occurrence Download

description: A dataset containing 138 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arhopalus foveicollis (Haldeman, 1847)"
 ]
}

 The dataset includes 138 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045783-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uqgah6
title: Occurrence Download

description: A dataset containing 17701 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spiranthes aestivalis (Poir.) Rich.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17701 records from 205 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080426-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mv2f7s
title: Occurrence Download

description: A dataset containing 224 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-10.38208 52.89565,-8.48145 52.89565,-8.48145 53.55989,-10.38208 53.55989,-10.38208 52.89565))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Carcinus maenas (Linnaeus, 1758)"
 ]
}

 The dataset includes 224 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003457-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qg5snr
title: Occurrence Download

description: A dataset containing 2882 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clematis viorna L."
 ]
}

 The dataset includes 2882 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080435-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ut7ipz
title: Occurrence Download

description: A dataset containing 8144 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Taraxacum erythrospermum Andrz. ex Besser"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8144 records from 166 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045784-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uyjrse
title: Occurrence Download

description: A dataset containing 118 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pylaisia brotheri Besch."
 ]
}

 The dataset includes 118 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0158110-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3kt78
title: Occurrence Download

description: A dataset containing 1848 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Mitostoma chrysomelas (Hermann, 1804))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1848 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044458-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jf3fnw
title: Occurrence Download

description: A dataset containing 2301 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spirobassia hirsuta (L.) Freitag & G.Kadereit",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2301 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080411-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ayomjj
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Bacteria from Penguin Guano, Antarctica"
 ]
}

 The dataset includes 70 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045784-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gmaet2
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-25.45277 67.17108,-31.96734 38.6907,-21.19324 25.32748,-13.92699 25.16044,-10.00154 33.6795,-1.73304 36.1851,11.21258 38.2731,12.96651 34.9323,30.83982 33.34542,42.53263 35.85102,43.11728 49.04721,33.34542 53.89138,33.59598 72.85045,-25.45277 67.17108))",
 "TaxonKey is Culex perexiguus Theobald, 1903"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113128-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.