cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.7nm7b
title: Data from: Performance and accuracy of lightweight and low-cost GPS data loggers according to antenna positions, fix intervals, habitats and animal movements

description: Recently developed low-cost Global Positioning System (GPS) data loggers
 are promising tools for wildlife research because of their affordability
 for low-budget projects and ability to simultaneously track a greater
 number of individuals compared with expensive built-in wildlife GPS.
 However, the reliability of these devices must be carefully examined
 because they were not developed to track wildlife. This study aimed to
 assess the performance and accuracy of commercially available GPS data
 loggers for the first time using the same methods applied to test built-in
 wildlife GPS. The effects of antenna position, fix interval and habitat on
 the fix-success rate (FSR) and location error (LE) of CatLog data loggers
 were investigated in stationary tests, whereas the effects of animal
 movements on these errors were investigated in motion tests. The units
 operated well and presented consistent performance and accuracy over time
 in stationary tests, and the FSR was good for all antenna positions and
 fix intervals. However, the LE was affected by the GPS antenna and fix
 interval. Furthermore, completely or partially obstructed habitats reduced
 the FSR by up to 80% in households and increased the LE. Movement across
 habitats had no effect on the FSR, whereas forest habitat influenced the
 LE. Finally, the mean FSR (0.90 ± 0.26) and LE (15.4 ± 10.1 m) values from
 low-cost GPS data loggers were comparable to those of built-in wildlife
 GPS collars (71.6% of fixes with LE &lt; 10 m for motion tests), thus
 confirming their suitability for use in wildlife studies.
description: GPS
 CatLogStationary and motion
 controlled tests
DOI: 10.25625/a2z8t8/hhwjes
title: Wendhausen_AF_meteo_30min.tab

description: :unav
DOI: 10.25625/a2z8t8/a5rogr
title: Dornburg_MC_meteo_30min.tab

description: :unav
DOI: 10.25625/a2z8t8/j6wmmy
title: Mariensee_AF_meteo_30min.tab

description: :unav
DOI: 10.25625/a2z8t8/kzo77m
title: Wendhausen_MC_meteo_30min.tab

description: :unav
DOI: 10.5061/dryad.602d6
title: Data from: The sesquiterpenes(E)-ß-farnesene and (E)-α-bergamotene quench ozone but fail to protect the wild tobacco Nicotiana attenuata from ozone, UVB, and drought stresses

description: Among the terpenes, isoprene (C5) and monoterpene hydrocarbons (C10) have
 been shown to ameliorate abiotic stress in a number of plant species via
 two proposed mechanisms: membrane stabilization and direct antioxidant
 effects. Sesquiterpene hydrocarbons (C15) not only share the structural
 properties thought to lend protective qualities to isoprene and
 monoterpene hydrocarbons, but also react rapidly with ozone, suggesting
 that sesquiterpenes may similarly enhance tolerance of abiotic stresses.
 To test whether sesquiterpenes protect plants against ozone, UVB light, or
 drought, we used transgenic lines of the wild tobacco Nicotiana attenuata.
 The transgenic plants expressed a maize terpene synthase gene (ZmTPS10)
 which produced a blend of (E)-ß-farnesene and (E)-α-bergamotene, or a
 point mutant of the same gene (ZmTPS10M) which produced (E)-ß-farnesene
 alone,. (E)-ß-farnesene exerted a local, external, and transient
 ozone-quenching effect in ozone-fumigated chambers, but we found no
 evidence that enhanced sesquiterpene production by the plant inhibited
 oxidative damage, or maintained photosynthetic function or plant fitness
 under acute or chronic stress. Although the sesquiterpenes (E)-ß-farnesene
 and (E)-α-bergamotene might confer benefits under intermittent heat
 stress, which was not tested, any roles in relieving abiotic stress may be
 secondary to their previously demonstrated functions in biotic
 interactions.
description: Figure
 filesAll data associated with
 the figures in the publicationfigurefiles150418.zipdata.filesMicrosoft excel files: Raw data for all figures in manuscript
DOI: 10.25625/a2z8t8
title: Multiyear eddy covariance and meteorological dataset from agroforestry and open cropland or grassland in northern Germany

description: Dataset corresponding to the project SIGNAL (Sustainable intensification of agriculture through agroforestry), subproject TP1.2, entitled "CO2, H2O and energy exchange". Christian Markwitz collected and processed the data corresponding to the 1st phase, 2016-2018. Justus van Ramshorst collected and processed the data corresponding to the 2nd phase, 2019-2021. José Ángel Callejas-Rodelas collected and processed the data corresponding to the 3rd phase, 2022-2024. Lukas Siebicke and Alexander Knohl wrote the project proposals and contributed to data analysis and harmonization. Project funded by the German Ministry of Education and Research (BMBF), project BonaRes, module A (first phase: SIGNAL 031A562A, second phase: SIGNAL 031B0510A, third phase: SIGNAL 031B1063A).
DOI: 10.5061/dryad.m713m
title: Data from: Effective connectivity of depth-structure-selective patches in the lateral bank of the macaque intraparietal sulcus

description: Extrastriate cortical areas are frequently composed of subpopulations of
 neurons encoding specific features or stimuli, such as color, disparity,
 or faces, and patches of neurons encoding similar stimulus properties are
 typically embedded in interconnected networks, such as the attention or
 face-processing network. The goal of the current study was to examine the
 effective connectivity of subsectors of neurons in the same cortical area
 with highly similar neuronal response properties. We first recorded
 single- and multi-unit activity to identify two neuronal patches in the
 anterior part of the macaque intraparietal sulcus (IPS) showing the same
 depth structure selectivity and then employed electrical microstimulation
 during functional magnetic resonance imaging in these patches to determine
 the effective connectivity of these patches. The two IPS subsectors we
 identified—with the same neuronal response properties and in some cases
 separated by only 3 mm—were effectively connected to remarkably distinct
 cortical networks in both dorsal and ventral stream in three macaques.
 Conversely, the differences in effective connectivity could account for
 the known visual-to-motor gradient within the anterior IPS. These results
 clarify the role of the anterior IPS as a pivotal brain region where
 dorsal and ventral visual stream interact during object analysis. Thus, in
 addition to the anatomical connectivity of cortical areas and the
 properties of individual neurons in these areas, the effective
 connectivity provides novel key insights into the widespread functional
 networks that support behavior.
description: datat-maps for every subject
 and stimulation site, together with template brain
DOI: 10.5061/dryad.2gm06
title: Data from: Contrasting taxonomic stratification of microbial communities in two hypersaline meromictic lakes

description: Hypersaline meromictic lakes are extreme environments in which water
 stratification is associated with powerful physicochemical gradients and
 high salt concentrations. Furthermore, their physical stability coupled
 with vertical water column partitioning makes them important research
 model systems in microbial niche differentiation and biogeochemical
 cycling. Here, we compare the prokaryotic assemblages from Ursu and Fara
 Fund hypersaline meromictic lakes (Transylvanian Basin, Romania) in
 relation to their limnological factors and infer their role in elemental
 cycling by matching taxa to known taxon-specific biogeochemical functions.
 To assess the composition and structure of prokaryotic communities and the
 environmental factors that structure them, deep-coverage small subunit
 (SSU) ribosomal RNA (rDNA) amplicon sequencing, community domain-specific
 quantitative PCR and physicochemical analyses were performed on samples
 collected along depth profiles. The analyses showed that the lakes
 harbored multiple and diverse prokaryotic communities whose distribution
 mirrored the water stratification patterns. Ursu Lake was found to be
 dominated by Bacteria and to have a greater prokaryotic diversity than
 Fara Fund Lake that harbored an increased cell density and was populated
 mostly by Archaea within oxic strata. In spite of their contrasting
 diversity, the microbial populations indigenous to each lake pointed to
 similar physiological functions within carbon degradation and sulfate
 reduction. Furthermore, the taxonomy results coupled with methane
 detection and its stable C isotope composition indicated the presence of a
 yet-undescribed methanogenic group in the lakes’ hypersaline
 monimolimnion. In addition, ultrasmall uncultivated archaeal lineages were
 detected in the chemocline of Fara Fund Lake, where the recently proposed
 Nanohaloarchaeota phylum was found to thrive.
description: Information for Andrei
 et al. articleInformation related to
 the article: "Contrasting taxonomic stratification of microbial
 communities in two hypersaline meromictic lakes" by Andrei et
 al.DataDryad.pdf
DOI: 10.5061/dryad.qb2jk
title: Data from: At the Central European – Balkan transition: forest land snail faunas of the Banat contrasted with those of the Carpathian chain

description: Twenty-nine forest sites in six sampling areas in the Banat region of
 Romania, adjacent to Serbia, were sampled to obtain inventories of their
 snail faunas and to make comparisons between these and previously studied
 faunas in the mountains from the Sudetes in the north-west to the Southern
 Transylvanian Carpathians in the south. 65 species were recorded overall,
 with between 13 and 33 at individual sites. Among the six sampling areas
 that on Schist rock at high altitude differed markedly from the others,
 and contained mainly species also found in Carpathian forests further
 north. The remainder, mainly on limestone, also differed among themselves,
 but contained more species endemic to the region or regions to the south,
 together with those found mainly in open rocky habitats further north.
 Some species and subspecies were restricted to particular areas within the
 region, and although ecological factors accounted for some of these
 differences, they did not explain all of them. The faunas were
 differentiated from those in the Carpathians further north, and showed a
 greater affinity to those from countries to the south. These patterns
 indicate a transition between northern regions with locally rich but
 regionally poor forest faunas and those of the Balkans and Mediterranean
 with many restricted endemics that survived the climatic fluctuations of
 the Pleistocene in situ. Such faunas are no richer at site level than
 those from further north, but differ more among themselves even when
 environmental conditions are similar.
description: Locality, habitat and
 species composition matricesDetails of the
 locations, habitats and composition of all samples included in the
 paperSupplementary
 material.doc
DOI: 10.60545/dlzmbl
title: Museo de Ictiología de la Universidad Tecnológica Indoamérica (MZUTI)

description: The Zoology Museum of the Universidad Tecnológica Indoamérica (MZUTI) aims to promote research and conservation of biodiversity through the study of preserved specimens. It also seeks to facilitate the dissemination of biological knowledge within scientific, educational, and general public spheres.Currently, the ichthyological collection at MZUTI contains over 890 cataloged and systematized records. Of the total preserved specimens, 88% have been taxonomically identified to the species level, and 12% to the genus level.This resource shares all records of freshwater fish held in the MZUTI collection.El Museo de Zoología de la Universidad Tecnológica Indoamérica (MZUTI) tiene como objetivo principal fomentar la investigación y conservación de la biodiversidad mediante el estudio de especímenes preservados. Asimismo, busca promover y facilitar la difusión del conocimiento biológico en los ámbitos científico, educativo y para el público en general.Actualmente, la colección ictiológica del MZUTI cuenta con más de 890 registros catalogados y sistematizados. Del total de especímenes preservados, el 88% ha sido identificado taxonómicamente hasta el nivel de especie y el 12% hasta el nivel de género.Este recurso comparte todos los registros de peces de agua dulce resguardados en la colección del MZUTI.
DOI: 10.5061/dryad.fb436
title: Data from: Molecular proxies for climate maladaptation in a long-lived tree (Pinus pinaster Aiton, Pinaceae)

description: Understanding adaptive genetic responses to climate change is a main
 challenge for preserving biological diversity. Successful predictive
 models for climate-driven range shifts of species depend on the
 integration of information on adaptation, including that derived from
 genomic studies. Long-lived forest trees can experience substantial
 environmental change across generations, which results in a much more
 prominent adaptation lag than in annual species. Here, we show that
 candidate-gene SNPs (Single Nucleotide Polymorphisms) can be used as
 predictors of maladaptation to climate in maritime pine (Pinus pinaster
 Aiton), an outcrossing long-lived keystone tree. A set of 18 SNPs
 potentially associated with climate, five of them involving amino
 acid-changing variants, were retained after performing logistic
 regression, latent factor mixed models and Bayesian analyses of
 SNP-climate correlations. These relationships identified temperature as an
 important adaptive driver in maritime pine and highlighted that selective
 forces are operating differentially in geographically discrete gene pools.
 The frequency of the locally advantageous alleles at these selected loci
 was strongly correlated with survival in a common garden under extreme
 (hot and dry) climate conditions, which suggests that candidate-gene SNPs
 can be used to forecast the likely destiny of natural forest ecosystems
 under climate change scenarios. Differential levels of forest decline are
 anticipated for distinct maritime pine gene pools. Geographically-defined
 molecular proxies for climate adaptation will thus critically enhance the
 predictive power of range-shift models and help establishing mitigation
 measures for long-lived keystone forest trees in the face of impending
 climate change.
description: Nuclear microsatellite
 dataNuclear microsatellite
 data for 772 maritime pine trees.Ppn_9nuSSRs.xlsxCandidate gene SNP dataData for 266 SNPs obtained from candidate genes and genotyped on 772 trees.Ppn_266candidateSNPs.xlsxControl SNP dataData for 1745 control SNPs genotyped on 495 trees.Ppn_1745controlSNPs.xlsx
DOI: 10.5061/dryad.nt4g6
title: Data from: Cyanobacteria drive community composition and functionality in rock-soil interface communities

description: Most ecological research on hypoliths, significant primary producers in
 hyperarid deserts, has focused on the diversity of individual groups of
 microbes (i.e. bacteria). However, microbial communities are inherently
 complex, and the interactions between cyanobacteria, heterotrophic
 bacteria, protista and metazoa, are likely to be very important for
 ecosystem functioning. Cyanobacterial and heterotrophic bacterial
 communities were analysed by pyrosequencing, while metazoan and protistan
 communities were assessed by T-RFLP analysis. Microbial functionality was
 estimated using carbon substrate utilization. Cyanobacterial community
 composition was significant in shaping community structure and function in
 hypoliths. Ecological network analysis showed that most significant
 co-occurrences were positive, representing potential synergistic
 interactions. There were several highly interconnected associations
 (modules) and specific cyanobacteria were important in driving the modular
 structure of hypolithic networks. Together, our results suggest that
 hypolithic cyanobacteria have strong effects on higher trophic levels and
 ecosystem functioning.
description: Valverde_et_al
DOI: 10.5061/dryad.524vj
title: Data from: Impact of repeated exposures on information spreading in social networks

description: Clustered structure of social networks provides the chances of repeated
 exposures to carriers with similar information. It is commonly believed
 that the impact of repeated exposures on the spreading of information is
 nontrivial. Does this effect increase the probability that an individual
 forwards a message in social networks? If so, to what extent does this
 effect influence people’s decisions on whether or not to spread
 information? Based on a large-scale microblogging data set, which logs the
 message spreading processes and users’ forwarding activities, we conduct a
 data-driven analysis to explore the answer to the above questions. The
 results show that an overwhelming majority of message samples are more
 probable to be forwarded under repeated exposures, compared to those under
 only a single exposure. For those message samples that cover various
 topics, we observe a relatively fixed, topic-independent multiplier of the
 willingness of spreading when repeated exposures occur, regardless of the
 differences in network structure. We believe that this finding reflects
 average people’s intrinsic psychological gain under repeated stimuli.
 Hence, it makes sense that the gain is associated with personal response
 behavior, rather than network structure. Moreover, we find that the gain
 is robust against the change of message popularity. This finding supports
 that there exists a relatively fixed gain brought by repeated exposures.
 Based on the above findings, we propose a parsimonious model to predict
 the saturated numbers of forwarding activities of messages. Our work could
 contribute to better understandings of behavioral psychology and social
 media analytics.
description: Data using in the paper
 of Cangqi Zhou et al. preparing for publication in PLOS
 ONEcqZhou_PLOSONE_DataPub.tar.gz
DOI: 10.5061/dryad.7613f
title: Data from: The incidence and pattern of co-pollinator diversification in dioecious and monoecious figs

description: Differences in breeding system are associated with correlated ecological
 and morphological changes in plants. In Ficus, dioecy and monoecy are
 strongly associated with different suites of traits (tree height,
 population density, fruiting frequency, pollinator dispersal ecology).
 Although ~30% of fig species are pollinated by multiple species of
 fig-pollinating wasps it has been suggested that co-pollinators are rare
 in dioecious figs. Here we test whether there is a connection between fig
 breeding system and co-pollinator incidence and diversification by
 conducting a meta-analysis of molecular data from pollinators of 119 fig
 species that includes new data from 15 Asian fig species. We find that the
 incidence of co-pollinators is not significantly different between
 monoecious and dioecious Ficus, and while all co-pollinators in dioecious
 figs are sister taxa, only 32.1% in monoecious figs are sister taxa. We
 present hypotheses to explain those patterns and discuss their
 consequences on the evolution of this mutualism.
description: The combined COI and 28S
 rRNA Bayesian tree and DNA sequencesThe combined COI and 28S
 rRNA Bayesian tree and DNA sequencescombine_tree.nexThe COI Bayesian tree and DNA sequencesThe COI Bayesian tree of fig pollinating wasps and DNA sequencesCOI_Figure_S1.nexThe 28S rRNA Bayesian tree and DNA sequencesThe 28S rRNA Bayesian tree of fig pollinating wasps and DNA sequences28S_Figure_S2.nexThe COI Bayesian tree of the genus Ceratosolen and DNA sequencesThe COI Bayesian tree of the genus Ceratosolen and DNA sequencesCeratoselen_Figure_S3.nexThe COI Bayesian tree of the genus Eupristina and DNA sequencesThe COI Bayesian tree of the genus Eupristina and DNA sequencesEupristina_Figure_S4.nexThe COI Bayesian tree of Ceratosolen gravelyi and Ceratosolen emarginatus and DNA sequencesThe COI Bayesian tree of Ceratosolen gravelyi and Ceratosolen emarginatus and DNA sequencesemerging_Figure_S5.nex
DOI: 10.5061/dryad.q83d0
title: Data from: Dual dimensionality reduction reveals independent encoding of motor features in a muscle synergy for insect flight control

description: What are the features of movement encoded by changing motor commands? Do
 motor commands encode movement independently or can they be represented in
 a reduced set of signals (i.e. synergies)? Motor encoding poses a
 computational and practical challenge because many muscles typically drive
 movement, and simultaneous electrophysiology recordings of all motor
 commands are typically not available. Moreover, during a single locomotor
 period (a stride or wingstroke) the variation in movement may have high
 dimensionality, even if only a few discrete signals activate the muscles.
 Here, we apply the method of partial least squares (PLS) to extract the
 encoded features of movement based on the cross-covariance of motor
 signals and movement. PLS simultaneously decomposes both datasets and
 identifies only the variation in movement that relates to the specific
 muscles of interest. We use this approach to explore how the main
 downstroke flight muscles of an insect, the hawkmoth Manduca sexta, encode
 torque during yaw turns. We simultaneously record muscle activity and
 turning torque in tethered flying moths experiencing wide-field visual
 stimuli. We ask whether this pair of muscles acts as a muscle synergy (a
 single linear combination of activity) consistent with their hypothesized
 function of producing a left-right power differential. Alternatively, each
 muscle might individually encode variation in movement. We show that PLS
 feature analysis produces an efficient reduction of dimensionality in
 torque variation within a wingstroke. At first, the two muscles appear to
 behave as a synergy when we consider only their wingstroke-averaged
 torque. However, when we consider the PLS features, the muscles reveal
 independent encoding of torque. Using these features we can predictably
 reconstruct the variation in torque corresponding to changes in muscle
 activation. PLS-based feature analysis provides a general two-sided
 dimensionality reduction that reveals encoding in high dimensional sensory
 or motor transformations.
description: EMG, torque, and feature
 analysis data from Manduca flight muscle during tethered yaw
 turnssee
 ReadMe.txtData_for_sponberg_et_al_dual_dimensionality.zip