cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1136081_d255
title: Ex13R51 PV25-5 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.19993964.v2
title: ARL Data from PROS station at Hanford site

description: ARL data from PROS station at Hanford site.
DOI: 10.3535/593-2z5-3bd
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jt1-hxx-nqa
title: †Trilobita

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1s7-n8b-c8w
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2t4-67n-x4l
title: Labradorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12443648.v1
title: Supplementary Table

description: List of genes for qPCR
DOI: 10.6084/m9.figshare.5255908.v1
title: 2728809.mp4

description: Rotating interference patterns for l=1
DOI: 10.3535/2jh-bvp-wna
title: Aethilla Hewitson, 1868

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/llm-t3h-lyj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1136081_d108
title: Ex3R43C3 DAPI-3 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.
DOI: 10.6084/m9.figshare.13233911.v1
title: crossing data

description: data of pedestrian crossing street
DOI: 10.6084/m9.figshare.13244750.v1
title: DMSP synthesis genes distinguish two types of DMSP producer phenotypes - Raw data

description: Raw data provided here can be used to reproduce figures in the manuscript using scrips at https://github.com/emcparland/DMSPgenes<br><br>Datasets provided here are as follows...hmm searchesDSYB/TpMT2_blastraw.txt: raw TBLASTN results, filtered and aligned to create hmm profilesDSYB/TpMT2.hmm: hmm profiles used to search MMETSP proteins and the Ocean Gene Atlas<br>isolate resultsfinal_DSYB/TpMT2.txt files: filtered results from tblastn (prokaryotes) and hmm searches for dsyB/DSYB and TpMT2forFig1.csv files: data to make Fig 1 in main text and Supp Table 1<br><br>reblast resultsDSYB/TpMT2_reblast.txt: raw results from the blastp reblast to identify potential prokaryote contamination<br>datasets for phylogeny.phy file: alignments for creating tree file to make treesRAxML file: tree file used to make tree in main text<br>TARA hmm searchesabundance_matrix files: results from hmm searches<br>environmental_param files: corresponding environmental data<br>
DOI: 10.3535/j8h-j3t-cdp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yf1-hf4-ysr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3979014.v1
title: Student answers to a questionnaire to assess a project-based learning software design course in 14/15 and 15/16

description: Answers to the questionnaire in courses 14/15 and 15/16: scanned hand-written responses (in PDF), and CSV files with the answers to the Likert scale questions.
DOI: 10.3535/67z-lym-b1j
title: Aethilla Hewitson, 1868

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v9j-aax-nsx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27835515.v1
title: B2C2.vaspFirst-principles prediction of new stable 2D orthorhombic (o)-B2CN and o-B2C2 materials for hydrogen storage applications via lithium decoration.

description: We provide the dataset supporting our study on hydrogen storage in 2D B₂C₂ and B₂CN structures. This includes input and output files for structural optimizations, data on dynamical stability, mechanical stability, adsorption energies, desorption temperatures, and gravimetric capacities. The dataset serves as a comprehensive summary of the computational results that underpin our findings.
DOI: 10.3535/46h-thv-xka
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x8s-b7z-fdz
title: †Trilobita

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.17046368.v1
title: Mental illness due to homelessness: a qualitative case study in Melaka, Malaysia

description: This was a qualitative case study that involved a face-to-face interview with key informants at the Pertubuhan Kebajikan Villa Harapan Melaka (Villa Harapan). Villa Harapan is a licensed caretaker centre established by the Department of Welfare, Melaka that provides shelter to homeless people with mental illness.
DOI: 10.3535/k1l-lkz-c1c
title: †Oepikina Salmon, 1942

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vch-4mw-cly
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5435110.v2
title: Wikimedia Iraq phone survey 1 - 2017

description: There are a total of 17 questions in the survey, addressing the following categories:Internet useMobile phone use (smartphones & basic voice/SMS phones)Awareness and use of WikipediaGeneral demographicsThe survey collected 2500 total responses, representing populations in 5 geographical regions served by 3 mobile Iraqi operators. 3 language choices (Arabic, English, Kurdish) were provided.Here are the main questions this survey was designed to answer. However, analyzing the full data set allows you to conduct more in-depth data explorations and gain meaningful insights beyond the points presented here.What is the actual number of people who use the internet?(Real-world behavior makes this difficult to measure from industry reports, since people might have access to the internet through school, friends, internet cafés, public Wifi, etc.)For internet users: What do people mostly use the internet for?For non-internet users: Why not use the internet?How many people use smartphones?Do people with smartphones use the internet from just Wifi? Or just cellular service?How many people think that they don’t use the internet, but still use Facebook or WhatsApp?How many people have heard of Wikipedia? What do they use it for? How often?If they have heard of Wikipedia, but aren’t using it, why not?<br>Compared to previous phone surveys in other countries, the 2017 Iraq phone survey presented new questions.What are people’s awareness of other major internet brands in comparison to Wikipedia?Can people find online content in their preferred language?How does data cost impact internet use?
DOI: 10.3535/5j2-wvl-ma1
title: †Pleurotomaria Defrance, 1826

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l2z-etd-197
title: †Asaphus (Neoasaphus) cornutus (Pander, 1830)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21476889.v1
title: Dataset - supplementary material 2

description: Analysis of the correlation between meteorological data from the North American Regional Reanalysis (NARR) and data available at Nunavik weather stations.Dataset used to produce the analysis for the electronic supplementary material 2, for the paper:Vuillaume, B., J. H. Richard, S. Hamel, J. Taillon, M. Festa-Bianchet and S. D. Côté. 2023. Birth date determines early calf survival in migratory caribou.
DOI: 10.6084/m9.figshare.28425077.v1
title: Trends in the seasonal amplitude of atmospheric methane

description: 1.GEOSChem_OH_output, Tropospheric average hydroxyl radical (OH) from 1984 to 2020 simulated by GEOS-Chem.2.GEOSChem_CH4_output_byINCAoh, Surface and tropospheric average methane concentrations from 1984 to 2020 from GEOS-Chem simulations forced by INCA OH.3. GEOSChem_CH4_output_byGEOSoh, Surface and tropospheric average methane concentrations from 1984 to 2020 from GEOS-Chem simulations forced by GEOS-Chem OH.Details of these data, please refer our Nature paper.<br><br>
DOI: 10.3535/r9p-ggf-jq8
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xs6-5ww-ne2
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5742579.v1
title: Additional file 1: of GTZ: a fast compression and cloud transmission tool optimized for FASTQ files

description: Compression ratios, compression time and descriptions of datasets are included in this file. (XLSX 19 kb)
DOI: 10.3535/nrz-bmc-fbe
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wcp-p2z-rrx
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28330532.v1
title: Supplementary materials: Potential and Mechanisms of Indigenous Indonesian Medicinal Plants in Treating Sexual Dysfunction: A Systematic Review and Pharmacological Network Overview

description: Supplementary materials
DOI: 10.3535/r05-b82-elc
title: Vesuvianite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sac-k5w-tn1
title: Granodiorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11881449.v2
title: Digital competences in higher education data set

description: Item codification from the research: <b>Are digital competences important in higher education education? A comparative study among Spanish and Latin American students</b>
DOI: 10.6084/m9.figshare.5248966.v1
title: ambipolar Na3Bi raw data and analysis scripts

description: transport measurements of Na_3Bi thin films grown on SiO_2<br>raw data and scripted analysis/ figure creation using python/ scipy/ matplotlib in support of the written manuscript
DOI: 10.3535/7rg-5jb-9wm
title: Stibnite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.4758451.v2
title: Supplementary_Information.zip

description: This zip contains CAD files from 3D printers to print custom-made holders for stepper motors, objectives and optical posts as well as an Ardunio algorithm to run a stepper motor. Furthermore, a Matlab program to calculate the speckle contrast can be downloaded. <br>This files are supplementary information to our paper "A step-by-step guide to reduce spatial coherence of laser light using a rotating ground glass diffuser".
DOI: 10.3535/snv-hfn-swy
title: Diabase

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xck-f1f-tm9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3812668_d7.v1
title: MOESM5 of Identification of G-quadruplex structures that possess transcriptional regulating functions in the Dele and Cdc6 CpG islands

description: Additional file 5. Luciferase reporter assay results with or without L1H1-7OTD for G4 DNA sequences cloned in pGL4.23 vector.
DOI: 10.25377/sussex.28333793.v1
title: <i>Lymnaea</i> Brain Map: Neuron Atlas for the mollusc <i>Lymnaea stagnalis</i>

description: This record represents a permanent citable version of the website<b>: </b><i>Lymnaea</i> Brain Map: Neuron Atlas for the mollusc <i>Lymnaea stagnalis</i> The contents of this record will be updated in tandem with any updates to the website. The contents are presented as an Excel file with multiple sheets, containing detail on different identified neuron types in the <i>Lymnaea</i> brain.<br><b>About the project</b>Thanks to their accessible nervous systems, molluscs have provided some of the most fundamental insights into how neural circuits generate and control behavior. Notably, their neurons are large and consistently positioned from one individual to the next, making the possibility of building a brain atlas realistic.In this project we address this challenge by using a synchrotron (particle accelerator) source to carry out rapid high-resolution X-ray imaging of the whole brain of the pond snail, <i>Lymnaea stagnalis</i>. Here, we have used this information to construct a 3D atlas of the part of the brain that controls feeding behavior. Later iterations will add detail on other regions of the CNS.This record provides a summary of key neurons in the <i>Lymnaea</i> CNS that could be readily located using our atlas. For each cell-type we then carried out targeted intracellular electrophysiological recordings that enabled us to summarize the key functional properties. The selection of neurons we showcase here includes cell-types that have previously been identified and characterized by us and others over the last six decades, as well as new cell-types that we identified directly using the cell atlas.<b>Contents:</b>Excel file with multiple sheets, containing detail on different identified neuron types in the <i>Lymnaea</i> brain. This resource is intended to be scalable, and we will update the atlas to include new cell-types in due course.readme.txt file containing Description information
DOI: 10.3535/lw1-gj6-k4c
title: †Murchisonia d'Archiac & Verneuil, 1841

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rre-kja-ffy
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22336540.v1
title: Herbivore and native plant diversity synergistically resist alien plant invasion regardless of nutrient conditions

description: <br>Alien plant invasion success can be inhibited by two key biotic factors: native herbivores and plant diversity. However, few studies have experimentally tested whether these factors interact to synergistically resist invasion success, especially factoring in changing global environments (e.g. nutrient enrichment). Here we tested how the synergy between native herbivores and plant diversity affects alien plant invasion success in various nutrient conditions. For this purpose, we exposed alien plant species in pot-mesocosms to different levels of native plant diversity (4 vs. 8 species), native generalist herbivores, and high and low soil nutrient levels. We found that generalist herbivores preferred alien plants to native plants, inhibiting invasion success in a native community. This inhibition was amplified by highly diverse native communities. Further, the amplified effect between herbivory and native plant diversity was independent of nutrient conditions. Our results suggest that a higher diversity of native communities can strengthen the resistance of native generalist herbivores to alien plant invasions by enhancing herbivory tolerance. The synergistic effect remains in force in nutrient-enriched habitats that are always invaded by alien plant species. Our results shed light on the effective control of plant invasions using multi-trophic means, even in the face of future global changes.
DOI: 10.6084/m9.figshare.27934632.v1
title: PVAC: Package Version Activity Categorizer, Leveraging Semantic Versioning in a Heterogeneous System

description: <pre><b>Context:</b>Modern open-source software ecosystems, such as those managed by GNU/Linux distributions, are composed of numerous packages developed independently by diverse communities. These ecosystems employ package management tools to<br>facilitate software installation and dependency resolution. However, these tools lack robust mechanisms for systematically evaluating the development activity and versioning dynamics within their heterogeneous software environments.<br><b>Objective:</b> This research aims to introduce a systematic method and a prototype tool for assessing version activity within heterogeneous package manager ecosystems, enabling quantitative analysis of software package updates.<br><b>Method:</b><br>We developed PVAC,a <b>P</b>ackage <b>V</b>ersion<b> </b><b>A</b>ctivity <b>C</b>ategorizer, a novel approach<br>that leverages semantic versioning to surface the activity of software packages at both the system level using the Version Number Delta (VND) metric and at the package level using the Activity Categorizer. PVAC utilizes tailored regular expressions to parse semantic versioning details (epoch, major, minor, and patch versions) from diverse package version strings, thereby enabling consistent categorization and quantitative scoring of version changes.<br><b>Results</b>:<br>PVAC was empirically evaluated using a dataset of 22,535 packages drawn from<br>recent releases of Debian and Ubuntu GNU/Linux distributions. Our findings<br>demonstrate PVAC's effectiveness for accurately categorizing versioning schemes and quantitatively measuring version activity across releases. We provide empirical evidence confirming that semantic versioning, including adapted variations, is predominantly employed across these ecosystems.<br><b>Conclusions</b>:<br>PVAC represents an effective solution for systematically assessing and<br>monitoring the software package version activity within heterogeneous ecosystems. By providing clear metrics for software activity, PVAC aids practitioners and researchers in identifying packages requiring attention, thereby reducing security risks and technical debt.</pre>
DOI: 10.3535/9qs-2jk-qwy
title: Hauyne

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/emv-y2r-1jt
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27715092.v1
title: The Brouta algorithm checks the results of environment variables

description: The Brouta algorithm checks the results of environment variables (based on rarefaction, observed richness, Fisher α）
DOI: 10.6084/m9.figshare.28551644.v1
title: Additional file 4 of Preoperative multiclass classification of thymic mass lesions based on radiomics and machine learning

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.c.3867883_d4.v1
title: Additional file 4: of Genome-wide DNA methylation analysis in blood cells from patients with Werner syndrome

description: List of DMRs between WS and CTR. (XLS 60Â kb)
DOI: 10.3535/cgr-f80-j0h
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ybf-e65-5pn
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/dst6kgsz5s
title: Evidence on the seismic effect along the Littoral Fault Zone offshore Hong Kong-Macao Greater Bay Area

description: Seismic data for the Littoral Fault Zone offshore Hong Kong-Macao Greater Bay Area
DOI: 10.3535/fkt-a24-6g1
title: †Cymbularia Koken, 1896

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/z8bd48s9ds
title: Different temporal dynamics after conflicts and errors in children and adults

description: After perceiving cognitive conflicts or errors, children as well as adults adjust their performance in terms of reaction time slowing on subsequent actions, resulting in the so called post-conflict slowing and post-error slowing, respectively. The development of these phenomena has been studied separately and with different methods yielding inconsistent findings. We aimed to assess the temporal dynamics of these two slowing phenomena within a single behavioral task. To do so, 9-13-year-old children and young adults performed a Simon task in which every fifth trial was incongruent and thus induced cognitive conflict and, frequently, also errors. We compared the reaction times on four trials following a conflict or an error. Both age groups slowed down after conflicts and did so even more strongly after errors. Disproportionally high reaction times on the first post-error trial were followed by a steady flattening of the slowing. Generally, children slowed down more than adults. In addition to highlighting the phenomenal and developmental robustness of post-conflict and post-error slowing these findings strongly suggest increasingly efficient performance adjustment through fine-tuning of cognitive control in the course of development.
DOI: 10.3535/2wx-vfa-xwl
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bf1-2sc-zgf
title: Sphaerochitina sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3683275_d1.v1
title: Additional file 1: Figure S1. of Plug-in-Gait calculation of the knee adduction moment in people with knee osteoarthritis during shod walking: comparison of two different foot marker models

description: Description: Multiple figures - supplementary limits of agreement plots for secondary outcome measures. Bland Altman plots and the 95% limits of agreement for the (A) peak knee flexion moment, (B) peak knee flexion in loading response, (C) peak knee extension in stance, (D) peak knee adduction in stance, (E) peak internal rotation in stance, (F) stance duration, (G) stride length, (H) cadence, (I) velocity and (J) base of support. The mean difference between conditions is shown on the Y-axis and the standard deviation of the difference is shown on the X-axis. Regression coefficient of proportional bias in data falling above or below the mean difference is shown inset. (ZIP 221 kb)
DOI: 10.3535/00x-3ym-ey1
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ekg-s7z-cdm
title: Eisenackitina cf. barrandei

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.749129.v1
title: "Technology,equity and access

description: Technology
DOI: 10.3535/jxb-v70-xhn
title: Syenite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qab-n3m-njb
title: Conochitina cribrosa?

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25405/data.ncl.12800669.v1
title: PLEXUS Thermal Conductivity Data

description: This dataset presents thermal conductivity measurements performed every 3 hours in the soil column at 250, 350, 550 and 750 mm.
DOI: 10.3535/9wm-b23-6ef
title: Porphyry

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q94-43w-rzf
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.