cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16676842.v1
title: Copy of Correlations between allocation to foliar phosphorus fractions and maintenance of photosynthetic integrity in six mangrove populations as affected by chilling.csv

description: ●Chilling restrains the distribution of mangroves. We tested whether foliar phosphorus (P) fractions and gene expression are associated with cold tolerance in mangrove species.●We exposed seedlings of six mangrove populations from different latitudes to favorable, chilling and recovery treatments, and measured their foliar P concentrations and fractions, photochemistry, night-time respiration, and gene expression. ●A <i>Kandelia obovata </i>(26.45ºN; KO) population completely and a <i>Bruguiera gymnorhiza</i> (21.50ºN; BGG) population partially (30%) survived chilling. <i>Avicennia marina</i> (24.29ºN), and other <i>B. gymnorhiza</i> (26.66ºN, 24.40ºN and 19.62ºN) populations died after chilling. Photosystems of KO and photosystem I of BGG were least injured. Following chilling, leaf P fractions, except nucleic acid P in three populations declined, and photoinhibition and night-time respiration increased in all populations, with the greatest impact in <i>B. gymnorhiza</i>. Leaf nucleic acid P was positively correlated with photochemical efficiency during recovery and night-time respiration across populations for each treatment.●Relatively high concentrations of nucleic acid P and metabolite P were associated with stronger chilling tolerance in <i>K. obovata</i>. <i>Bruguiera gymnorhiza</i> exhibited relatively low concentrations of organic P in favorable and chilling conditions, but its partially survived population showed stronger compensation in nucleic acid P and Pi concentrations and gene expression during recovery.
DOI: 10.15139/s3/xsgxum
title: Replication Data for: LPG stove and fuel intervention among pregnant women reduce fine particle air pollution exposures in three countries: Pilot results from the HAPIN trial

description: Documentation for Liao/Kirby et al data and scripts: Scripts: 1. Figure_1.R contains R script to generate figure 1. 2. Table_3.R contains R script to generate table 3. 3. Table 4+SM_analysis.do contains Stata script for generating table 4 and sensitivity analysis results in supplemental matarials. 4. SM_figures_tables.R contains R script for generating table S1 and figure S1 in supplemental materials. Data: 1. ExpMod_KAP_v2.csv contains processed kitchen PM2.5 data with covariates, for main analysis 2. ExpMod_PEM_v2.csv contains processed personal PM2.5 data with covariates, for main analysis 3. Pilot_expousre_data_IN+GT+RW_all.csv contains PM2.5 data only, including PM2.5 duplicates, for sensitivity analysis. 4. Table_2.xlsx contains baseline covariates data, for table 2. 5. Data dictionary.xlsx contains data dictionary for all above 4 datasets. Folder: 1. data: contains all data (explained above). 2. Figure2_data_script: contains data and script for generating figure 2 only.
DOI: 10.5258/soton/d1792
title: Dataset for Toy Model of Harmonic and Sum Frequency Generation in 2D Dielectric Nanostructures

description: This dataset supports the article entitled "Toy Model of Harmonic and Sum Frequency Generation in 2D Dielectric Nanostructures" by J. Xu, V. Savinov and E. Plum, published in Scientific Reports in 2021.
DOI: 10.6084/m9.figshare.16691686
title: Supplementary Material for: <b><i>BEND4</i></b> as a Candidate Gene for an Infection-Induced Acute Encephalopathy Characterized by a Cyst and Calcification of the Pons and Cerebellar Atrophy

description: Three siblings born to Turkish parents from the same village had normal brain development until acute neurological deterioration between 12 months and 8 years of age. Consequent loss of all acquired motor, social, and language functions following infections was associated with a pontine cyst, calcification, and cerebellar atrophy. Exome sequencing revealed a homozygous c.1297G&gt;A (p.Gly433Ser) alteration in <i>BEND4</i>, which was predicted to be deleterious in in silico analysis tools and segregated in multiple affected individuals in the family. <i>BEND4</i> has not been associated with any existing disease. Immunofluorescence microscopy analysis of wild-type and mutant BEND4 expressing Vero cells showed nuclear and cytoplasmic localization. Wild-type BEND4 displayed a network-like distribution, whereas mutant BEND4 showed a juxtanuclear distribution pattern. Differential proteome analysis of Vero cells expressing BEND4 revealed that mutant BEND4 expression caused selective increase in reticulocalbin-1 and endoplasmic reticulum resident protein-29. Both proteins are associated with the endoplasmic reticulum and are primarily involved in protein processing and folding pathways. Any defect or stress in protein folding creates stress on cells and may cause chronic damage. This is the first study showing that pathogenic <i>BEND4</i> variants may lead to an infection-induced acute necrotizing encephalopathy as demonstrated in characteristic neuroimaging findings.
DOI: 10.6084/m9.figshare.16691686.v1
title: Supplementary Material for: <b><i>BEND4</i></b> as a Candidate Gene for an Infection-Induced Acute Encephalopathy Characterized by a Cyst and Calcification of the Pons and Cerebellar Atrophy

description: Three siblings born to Turkish parents from the same village had normal brain development until acute neurological deterioration between 12 months and 8 years of age. Consequent loss of all acquired motor, social, and language functions following infections was associated with a pontine cyst, calcification, and cerebellar atrophy. Exome sequencing revealed a homozygous c.1297G&gt;A (p.Gly433Ser) alteration in <i>BEND4</i>, which was predicted to be deleterious in in silico analysis tools and segregated in multiple affected individuals in the family. <i>BEND4</i> has not been associated with any existing disease. Immunofluorescence microscopy analysis of wild-type and mutant BEND4 expressing Vero cells showed nuclear and cytoplasmic localization. Wild-type BEND4 displayed a network-like distribution, whereas mutant BEND4 showed a juxtanuclear distribution pattern. Differential proteome analysis of Vero cells expressing BEND4 revealed that mutant BEND4 expression caused selective increase in reticulocalbin-1 and endoplasmic reticulum resident protein-29. Both proteins are associated with the endoplasmic reticulum and are primarily involved in protein processing and folding pathways. Any defect or stress in protein folding creates stress on cells and may cause chronic damage. This is the first study showing that pathogenic <i>BEND4</i> variants may lead to an infection-induced acute necrotizing encephalopathy as demonstrated in characteristic neuroimaging findings.
DOI: 10.5258/soton/d1734
title: Data to Support Insights into HPPs in hBN via TMD Raman

description: This dataset contains resonance Raman spectroscopy data obtained on hBN encapsulated MoSe2 and WSe2 monolayers at 4 K. This data underpins the paper with preliminary title: "Insights into hyperbolic phonon polaritons in hBN using Raman scattering from encapsulated transition metal dichalcogenide layers". For full details of the results and experimental conditions pleaser refer to the paper and associated supplementary information.
DOI: 10.6084/m9.figshare.16689271.v1
title: Online Resource 1.xlsxMicroarray analysis of overexpression of StZFP2 in Arabidopsis Col-0 upon wounding at 1hr and 6hr

description: Arabidopsis ecotype Col-0 was transformed with StZFP2 from potato under the control of the 35S promoter. Two sense lines were pooled and Col-0 and the OEEV47 (OEStZFP2) were wounded and harvested in 1hr or 6hr. A microarray analysis was performed on Control Col-0 or OEEV47 lines at 0h, and wounded and harvested at 1h or 6h.
DOI: 10.6084/m9.figshare.16689271
title: Online Resource 1.xlsxMicroarray analysis of overexpression of StZFP2 in Arabidopsis Col-0 upon wounding at 1hr and 6hr

description: Arabidopsis ecotype Col-0 was transformed with StZFP2 from potato under the control of the 35S promoter. Two sense lines were pooled and Col-0 and the OEEV47 (OEStZFP2) were wounded and harvested in 1hr or 6hr. A microarray analysis was performed on Control Col-0 or OEEV47 lines at 0h, and wounded and harvested at 1h or 6h.
DOI: 10.6084/m9.figshare.16358961
title: Data on climate-related financial policies in G20 countries

description: Data on climate-related financial policies in G20 countries (excluding EU) and focused on the period 2000-2020
DOI: 10.3886/e140961
title: Data and Code for: Mistakes, Overconfidence and the Effect of Sharing on Detecting Lies

description: Mistakes and overconfidence in detecting lies could help lies spread. Participants in our experiments observe videos in which senders either tell the truth or lie, and are incentivized to distinguish between them. We find that participants fail to detect lies, but are overconfident about their ability to do so. We use these findings to study the determinants of sharing and its effect on lie detection, finding that even when incentivized to share truthful videos, participants are more likely to share lies. Moreover, the receivers are more likely to believe shared videos. Combined, the tendency to believe lies increases with sharing.
description: other;
DOI: 10.5517/ccdc.csd.cc1pycrr
title: CCDC 1577365: Experimental Crystal Structure Determination

description: Related Article: Peng Hu, Ling-hui Cao, Ao-gang Liu, Yi-quan Zhang, Tian-le Zhang, Bao Li|2021|Dalton Trans.|50|12814|doi:10.1039/D1DT02380B
DOI: 10.6073/pasta/150c49dbde3bcccfcec49d8a19c134e5
title: Jornada Basin LTER: Wireless meteorological station at NPP T-EAST site: 5-minute summary wind and air temperature data: 2013 - ongoing

description: 5-minute summary data at NPP T-EAST met station. Average air temperature, wind speed and wind direction are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP T-EAST site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature at approximate 2.5m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/686f18b70b343a683eb299c0927646f5
title: Jornada Basin LTER: Wireless meteorological station at NPP T-EAST site: 1-hour summary data: 2013 - ongoing

description: Hourly summary data at NPP T-EAST met station. Average/maximum/minimum air temperature; average relative humidity and wind direction; average/maximum wind speed; solar radiation; albedo. These are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP T-EAST site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Solar radiation is measured at 3m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.5281/zenodo.8401329
title: The RGB dataset for person identification under various occluded conditions

description: The dataset is collected by a COTS, Freqency Modulated Continuous Wave radar and an RGB-D camera. The dataset has been collected from 9 recruited individuals, which are instructed to walk behind the obstacle in an inbound/outbound manner, with each subject perfoms 5 consecutive minutes of walking. The point cloud dataset is accessible on https://zenodo.org/record/8377254
DOI: 10.5281/zenodo.8401328
title: The RGB dataset for person identification under various occluded conditions

description: The dataset is collected by a COTS, Freqency Modulated Continuous Wave radar and an RGB-D camera. The dataset has been collected from 9 recruited individuals, which are instructed to walk behind the obstacle in an inbound/outbound manner, with each subject perfoms 5 consecutive minutes of walking. The point cloud dataset is accessible on https://zenodo.org/record/8377254
DOI: 10.5281/zenodo.8377254
title: The mmWave radar point cloud dataset for person identification under various occluded conditions

description: The dataset is collected by a COTS, Freqency Modulated Continuous Wave radar and an RGB-D camera. The dataset has been collected from 9 recruited individuals, which are instructed to walk behind the obstacle in an inbound/outbound manner, with each subject perfoms 5 consecutive minutes of walking. The RGB dataset is accessible on https://zenodo.org/record/8401329
DOI: 10.5281/zenodo.8377253
title: The mmWave radar point cloud dataset for person identification under various occluded conditions

description: The dataset is collected by a COTS, Freqency Modulated Continuous Wave radar and an RGB-D camera. The dataset has been collected from 9 recruited individuals, which are instructed to walk behind the obstacle in an inbound/outbound manner, with each subject perfoms 5 consecutive minutes of walking. The RGB dataset is accessible on https://zenodo.org/record/8401329
DOI: 10.6073/pasta/b1d757c2cee622ecdacb2cdac036efc8
title: Jornada Basin LTER: Wireless meteorological station at NPP T-EAST site: Daily summary data: 2013 - ongoing

description: Daily summary data at NPP T-EAST met station. Average/maximum/minimum air temperature; average/maximum relative humidity and wind speed and average wind direction; solar radiation; albedo. These are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP T-EAST site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Solar radiation is measured at 3m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/c56b7228ecfbd5ad847ce5f95d9cd070
title: Jornada Basin LTER: Wireless meteorological station at NPP T-EAST site: 1-second summary precipitation data: 2013 - ongoing

description: 1-second summary precipitation data at NPP T-EAST met station. Total precipitation per second is recorded only if there is measurable precipitation. This is recorded at an automated meteorological station installed at Jornada LTER NPP T-EAST site.. This climate station is operated by the Jornada LTER Program. IMPORTANT: Rainfall is only recorded when a bucket tip occurs on the tipping bucket rain gauge. If there is missing data due to equipment or other problems, there will be no indication of this within this dataset. The user needs to review precipitation values in the 30 minute or hourly summary datasets to determine if there are missing data in this 1 second detailed precipitation dataset. Reference the package i.d.'s knb-lter-jrn.210437028, knb-lter-jrn.210437043, and knb-lter-jrn.210437058 for the NPP T-EAST met station 30 minute, hourly, and daily summary datasets, respectively. This is an ONGOING dataset.
DOI: 10.6073/pasta/127c4f6c9bf4c251603688450ede5f6d
title: Jornada Basin LTER: Wireless meteorological station at NPP T-EAST site: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data at NPP T-EAST met station. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured every 30 minutes at an automated meteorological station installed at Jornada LTER NPP T-EAST site. Measurements are made every 30 minutes at 10 cm, 20 cm, and 30 cm soil depths. This is an ONGOING dataset.
DOI: 10.6073/pasta/37dca51335a9ae18954daf7ac34f9f67
title: Jornada Basin LTER: Wireless meteorological station at NPP T-EAST site: Daily average soil volumetric water content data: 2013 - ongoing

description: Daily average of 30-minute Volumetric Water Content at NPP T-EAST met station. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured and calculated at an automated meteorological station installed at Jornada LTER NPP T-EAST site. The daily average at 3 soil depths is calculated from measurements made every 30 minutes at 10 cm, 20 cm, and 30 cm. This is an ONGOING dataset.
DOI: 10.6073/pasta/556615b242897a581623eddb1bcb791c
title: Jornada Basin LTER: Wireless meteorological station at NPP T-TAYL site: 5-minute summary wind and air temperature data: 2013 - ongoing

description: 5-minute summary data at NPP T-TAYL met station. Average air temperature, wind speed and wind direction are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP T-TAYL site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature at approximate 2.5m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.5281/zenodo.8398881
title: Mechanically recyclable melt-spun fibers from lignin esters and iron oxide nanoparticles: towards circular lignin materials

description: Source data for the article: Mechanically recyclable melt-spun fibers from lignin esters and iron oxide nanoparticles: towards circular lignin materials† Unnimaya Thalakkale Veettil, <sup><em>a</em></sup> Adrian Moreno, ‡<sup><em>a</em></sup> Alberto J. Huertas-Alonso, <sup><em>a</em></sup> Mohammad Morsali, <sup><em>ab</em></sup> Ievgen V. Pylypchuk, <sup><em>a</em></sup> Li-Yang Liu <sup><em>a</em></sup> and Mika H. Sipponen *<sup><em>ab</em></sup> Green Chemistry https://doi.org/10.1039/D3GC02381H
DOI: 10.5281/zenodo.8398880
title: Mechanically recyclable melt-spun fibers from lignin esters and iron oxide nanoparticles: towards circular lignin materials

description: Source data for the article: Mechanically recyclable melt-spun fibers from lignin esters and iron oxide nanoparticles: towards circular lignin materials† Unnimaya Thalakkale Veettil, <sup><em>a</em></sup> Adrian Moreno, ‡<sup><em>a</em></sup> Alberto J. Huertas-Alonso, <sup><em>a</em></sup> Mohammad Morsali, <sup><em>ab</em></sup> Ievgen V. Pylypchuk, <sup><em>a</em></sup> Li-Yang Liu <sup><em>a</em></sup> and Mika H. Sipponen *<sup><em>ab</em></sup> Green Chemistry https://doi.org/10.1039/D3GC02381H
DOI: 10.6073/pasta/edaeb94db40cee7aab29424f15132487
title: Jornada Basin LTER: Wireless meteorological station at NPP T-TAYL site: 1-hour summary data: 2013 - ongoing

description: Hourly summary data at NPP T-TAYL met station. Average/maximum/minimum air temperature; average relative humidity and wind direction; average/maximum wind speed. These are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP T-TAYL site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.25442/hku.24152229
title: Supporting data for "Bioenergetics study of pollen tube growth in Arabidopsis thaliana"

description: This dataset contains all raw (images, excel files, videos) and the preprocessed data for plotting in my thesis. Data subsets are arranged or classified according to their presentation order in the thesis. The number of folder names represents the date (YYYY-MM-DD) when the data was acquired, while the following R1 and R2 represent a biological replicate number. Due to the file size limitation, many related videos especially for Chapter IV are not included and they will be provided upon request.
DOI: 10.25442/hku.24152229.v1
title: Supporting data for "Bioenergetics study of pollen tube growth in Arabidopsis thaliana"

description: This dataset contains all raw (images, excel files, videos) and the preprocessed data for plotting in my thesis. Data subsets are arranged or classified according to their presentation order in the thesis. The number of folder names represents the date (YYYY-MM-DD) when the data was acquired, while the following R1 and R2 represent a biological replicate number. Due to the file size limitation, many related videos especially for Chapter IV are not included and they will be provided upon request.
DOI: 10.25442/hku.24166572
title: <i>Supporting data for “</i>Label-free morphological profiling of immune cells: methods and applications<i>”</i>

description: This dataset relates to the thesis submitted to HKU about "Label-free morphological profiling of immune cells: methods and applications". The thesis aims to explore the T cell activation progress with high-throughput, ultrafast scanning QPI imaging flow cytometry, multiplexed Asymmetric-detection Time-stretch Optical Microscopy (multi-ATOM), to demonstrate optobiophysical profiling could be done by gathering single T cell optobiophysical morphological features at large scale. The thesis reported the high-resolution, single-cell images obtained from multi-ATOM were able to identify crucial optobiophysical profiles of T cell activations, between resting states and activation states, in addition to T cell subtypes (CD4+ and CD8+) profile changes from early to late stage of activation, with dataset uploaded in the HKU datahub. This illustrated the unrevealed capability of applying QPI toward large-scale immunological studies in the future such as screening the efficacy of engineered T cells towards targeted cells, such as cancerous cells.
DOI: 10.25442/hku.24166572.v1
title: <i>Supporting data for “</i>Label-free morphological profiling of immune cells: methods and applications<i>”</i>

description: This dataset relates to the thesis submitted to HKU about "Label-free morphological profiling of immune cells: methods and applications". The thesis aims to explore the T cell activation progress with high-throughput, ultrafast scanning QPI imaging flow cytometry, multiplexed Asymmetric-detection Time-stretch Optical Microscopy (multi-ATOM), to demonstrate optobiophysical profiling could be done by gathering single T cell optobiophysical morphological features at large scale. The thesis reported the high-resolution, single-cell images obtained from multi-ATOM were able to identify crucial optobiophysical profiles of T cell activations, between resting states and activation states, in addition to T cell subtypes (CD4+ and CD8+) profile changes from early to late stage of activation, with dataset uploaded in the HKU datahub. This illustrated the unrevealed capability of applying QPI toward large-scale immunological studies in the future such as screening the efficacy of engineered T cells towards targeted cells, such as cancerous cells.
DOI: 10.25442/hku.24171654
title: Raw Data for PhD Study (C.C. Au-Yeung)

description: Raw data for the PhD study, including data of X-ray crystal structures, photophysical studies (UV-vis absorption and emission), transient-absorption studies (TAS), electrochemical studies (CV), and OLED performance.
DOI: 10.25442/hku.24171654.v1
title: Raw Data for PhD Study (C.C. Au-Yeung)

description: Raw data for the PhD study, including data of X-ray crystal structures, photophysical studies (UV-vis absorption and emission), transient-absorption studies (TAS), electrochemical studies (CV), and OLED performance.