cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25377/sussex.21641795.v1
title: Research data for paper: Thorium- and Uranium-Mediated C–H Activation of a Silyl-Substituted Cyclobutadienyl Ligand

description: Data for paper published in Inorganic Chemistry Dec 2022 <br> CIF files and checkcif files for all compounds. <br> Abstract Cyclobutadienyl complexes of the f-elements are a relatively new yet poorly understood class of sandwich and half-sandwich organometallic compounds. We now describe cyclobutadienyl transfer reactions of the magnesium reagent [(η4-Cb'''')Mg(THF)3] (<strong>1</strong>), where Cb'''' is tetrakis(trimethylsilyl)cyclobutadienyl, toward thorium(IV) and uranium(IV) tetrachlorides. The 1:1 stoichiometric reactions between <strong>1</strong> and AnCl4 proceed with intact transfer of Cb'''' to give the half-sandwich complexes [(η4-Cb'''')AnCl(μ-Cl)3Mg(THF)3] (An = Th, <strong>2</strong>; An = U, <strong>3</strong>). Using a 2:1 reaction stoichiometry produces [Mg2Cl3(THF)6][(η4-Cb'''')An(η3-C4H(SiMe3)3-κ-(CH2SiMe2)(Cl)] (An = Th, [Mg2Cl3(THF)6][<strong>4</strong>]; An = U [Mg2Cl3(THF)6][<strong>5</strong>]), in which one Cb'''' ligand has undergone cyclometalation of a trimethylsilyl group, resulting in the formation of an An–C σ-bond, protonation of the four-membered ring, and an η3-allylic interaction with the actinide. Complex solution-phase dynamics are observed with multinuclear nuclear magnetic resonance spectroscopy for both sandwich complexes. A computational analysis of the reaction mechanism leading to the formation of <strong>4</strong> and <strong>5</strong> indicates that the cyclobutadienyl ligands undergo C–H activation across the actinide center.
DOI: 10.5281/zenodo.8119862
title: Data platform (genotyping data set) related to ERDF postdoctoral project No. 1.1.1.2/VIAA/4/20/718 "The role of vitamin D gene polymorphisms and its receptors in the modulation of intestinal inflammation in patients with relapsing and progressive forms of multiple sclerosis".

description: <strong>Data platform </strong><strong>(genotyping dataset)</strong> <strong>related to the ERDF postdoctoral project No. </strong><strong>1.1.1.2/VIAA/4/20/718</strong><strong> “</strong><strong>The role of vitamin D and its receptor gene polymorphisms in the modulation of intestinal inflammation in patients with relapsing and progressive forms of multiple sclerosis</strong><strong>”.</strong> <strong>About the project and gathered data:</strong> The dataset contains genotyping data on 289 sex-balanced samples (approximately 60% women / 40% men)) were created at the the multiple sclerosis (MS) Clinic of the Latvian Maritime Medical Center (LMMC) in 2011 (disease duration of 1-51 years); the collection was updated within the framework of the ERDF MS project (2017-2020) and replenished during the ERDF postdoctoral project No. 1.1.1.2/VIAA/4/20/718 “The role of vitamin D and its receptor gene polymorphisms in the modulation of intestinal inflammation in patients with relapsing and progressive forms of multiple sclerosis” (2021-2023). For the <strong>Genotyping dataset </strong>relevant information for each patient from the MS disease cohort, referring to proteasomal gene genetic variations (microsatellites and SNPs): (HSMS006 <em>(PSMA6),</em> HSMS602 <em>(FAM177A1),</em> HSMS701 <em>(KIAA0391)</em>, HSMS702 <em>(KIAA0391)</em> HSMS801 <em>(KIAA0391)</em>, rs11543947<em>(PSMB5), </em>rs2277460 (mi110), rs1048990 (mi8)<em> (PSMA6),</em> rs1048990 (mi8)<em> (PSMA6),</em> rs2295826/rs2295827<em>(PSMC6),</em> rs2348071 <em>(PSMA3),</em> rs2071543, rs9357155 <em>(PSMB8),</em> rs17587<em>(PSMB9),</em> rs74421874 <em>(PSMD9); </em>rs9275596 from HLA region; vitamin D-related genes (VDR and GC) polymorphisms: rs2228570, rs1544410, rs7975232, rs731236 (<em>VDR</em>) and rs7041, rs4588 <em>(GC).</em>
description: The study was funded from the Postdoc project No. 1.1.1.2/VIAA/4/20/718 "The role of vitamin D and its receptor gene polymorphisms in the modulation of intestinal inflammation in patients with relapsing and progressive forms of multiple sclerosis" .
description: {"references": ["N. Paramonova, J. Kalnina et al., Genetic variations in the PSMA6 and PSMC6 proteasome genes are associated with multiple sclerosis risk and response to interferon beta therapy in Latvians. (2020), Int J Mol Med. doi: 10.3892/etm.2021.9909.", "N. Paramonova, I.Trapina, et al., An Intergenic rs9275596 Polymorphism on Chr. 6p21 Is Associated with Multiple Sclerosis in Latvians. (2020), Medicina DOI:10.3390/medicina56040154."]}
DOI: 10.5281/zenodo.8119861
title: Data platform (genotyping data set) related to ERDF postdoctoral project No. 1.1.1.2/VIAA/4/20/718 "The role of vitamin D gene polymorphisms and its receptors in the modulation of intestinal inflammation in patients with relapsing and progressive forms of multiple sclerosis".

description: <strong>Data platform </strong><strong>(genotyping dataset)</strong> <strong>related to the ERDF postdoctoral project No. </strong><strong>1.1.1.2/VIAA/4/20/718</strong><strong> “</strong><strong>The role of vitamin D and its receptor gene polymorphisms in the modulation of intestinal inflammation in patients with relapsing and progressive forms of multiple sclerosis</strong><strong>”.</strong> <strong>About the project and gathered data:</strong> The dataset contains genotyping data on 289 sex-balanced samples (approximately 60% women / 40% men)) were created at the the multiple sclerosis (MS) Clinic of the Latvian Maritime Medical Center (LMMC) in 2011 (disease duration of 1-51 years); the collection was updated within the framework of the ERDF MS project (2017-2020) and replenished during the ERDF postdoctoral project No. 1.1.1.2/VIAA/4/20/718 “The role of vitamin D and its receptor gene polymorphisms in the modulation of intestinal inflammation in patients with relapsing and progressive forms of multiple sclerosis” (2021-2023). For the <strong>Genotyping dataset </strong>relevant information for each patient from the MS disease cohort, referring to proteasomal gene genetic variations (microsatellites and SNPs): (HSMS006 <em>(PSMA6),</em> HSMS602 <em>(FAM177A1),</em> HSMS701 <em>(KIAA0391)</em>, HSMS702 <em>(KIAA0391)</em> HSMS801 <em>(KIAA0391)</em>, rs11543947<em>(PSMB5), </em>rs2277460 (mi110), rs1048990 (mi8)<em> (PSMA6),</em> rs1048990 (mi8)<em> (PSMA6),</em> rs2295826/rs2295827<em>(PSMC6),</em> rs2348071 <em>(PSMA3),</em> rs2071543, rs9357155 <em>(PSMB8),</em> rs17587<em>(PSMB9),</em> rs74421874 <em>(PSMD9); </em>rs9275596 from HLA region; vitamin D-related genes (VDR and GC) polymorphisms: rs2228570, rs1544410, rs7975232, rs731236 (<em>VDR</em>) and rs7041, rs4588 <em>(GC).</em>
description: The study was funded from the Postdoc project No. 1.1.1.2/VIAA/4/20/718 "The role of vitamin D and its receptor gene polymorphisms in the modulation of intestinal inflammation in patients with relapsing and progressive forms of multiple sclerosis" .
description: {"references": ["N. Paramonova, J. Kalnina et al., Genetic variations in the PSMA6 and PSMC6 proteasome genes are associated with multiple sclerosis risk and response to interferon beta therapy in Latvians. (2020), Int J Mol Med. doi: 10.3892/etm.2021.9909.", "N. Paramonova, I.Trapina, et al., An Intergenic rs9275596 Polymorphism on Chr. 6p21 Is Associated with Multiple Sclerosis in Latvians. (2020), Medicina DOI:10.3390/medicina56040154."]}
DOI: 10.5281/zenodo.8119860
title: Data from: Business and publication model of surgical journals: A bibliometric analysis

description: The dataset contains information about surgical journals included in the SCOPUS database used in our research. The following information is present in the data file: Title Journal sub-specialty Country Origin Continent SJR Publisher Types of Publisher Publication Model Language
DOI: 10.5281/zenodo.8119859
title: Data from: Business and publication model of surgical journals: A bibliometric analysis

description: The dataset contains information about surgical journals included in the SCOPUS database used in our research. The following information is present in the data file: Title Journal sub-specialty Country Origin Continent SJR Publisher Types of Publisher Publication Model Language
DOI: 10.6084/m9.figshare.23634687
title: RNAseq dataset.xlsx

description: RNA was extracted from the rhizosphere samples using a PowerSoil® RNA extraction kit (Qiagen Iberia S.L., Madrid, Spain) following the manufacturer's instructions and its amount was quantified using a NanoDrop 2000 spectrophotometer (Thermo Fisher Scientific, Waltham, MA, USA). For the RNAseq experiment, the quantity and quality of RNA were verified by the Genomics and Ultrasequencing Service Unit (University of Malaga) and subsequently sequenced using NextSeq550 equipment (Illumina). The raw reads and their subsequent processing were carried out by the Centre for Supercomputing and Bioinnovation (University of Malaga). Once the expression profile was calculated, the differentially expressed genes (<em>P</em> values &lt; 0.05 and Log2 Fold Change &gt; 1 or &lt; −1) between the wild-type strain PcPCL1606 and Δ<em>darB</em> in interaction with the roots of avocado plants were obtained in order to identify possible genes regulated by HPR.
DOI: 10.5281/zenodo.8119846
title: Uncovering the Power Trio

description: Data set
DOI: 10.5281/zenodo.8119847
title: Uncovering the Power Trio

description: Data set
DOI: 10.5281/zenodo.8119899
title: Uncovering the Power Trio

description: Data set
DOI: 10.6084/m9.figshare.23634705
title: Supplementary materials.pdf

description: Support data
DOI: 10.6084/m9.figshare.23634705.v1
title: Supplementary materials.pdf

description: Support data
DOI: 10.17617/4.ce
title: A Carbon Nanodot Based Near-Infrared Photosensitizer with a Protein-Ruthenium Shell for Low-Power Photodynamic Applications

description: This contains the Raw Data and Processed Data of:
DOI: 10.6084/m9.figshare.23065440
title: Paternal help in larval release of three mudskipper species

description: After the discovery of aerial embryonic incubation in mudskippers, it was found that the male induces larval hatching by removing the air from the egg-chamber so that the eggs immerse in water. Do the adults provide additional support to the newly hatched larvae to help them leave the life-endangering hypoxic water inside the burrow? This paper compares 18 hatching events of 3 species: dusky gilled mudskipper, Pearse´s mudskipper and slender mudskipper. After air removal 3 different burrow-shape dependent strategies of paternal help for larval burrow leaving were observed: (1) very frequent diving toward the burrow shaft or into the egg-chamber to generate turbulences that can help to propel the larvae toward the water surface; (2) tail-undulation to create a water current out of the burrow that would take along the hatched larvae; and (3) intake of larvae into the paternal mouth, subsequently spitting them out to expel them from the burrow.
DOI: 10.6084/m9.figshare.23065440.v2
title: Paternal help in larval release of three mudskipper species

description: After the discovery of aerial embryonic incubation in mudskippers, it was found that the male induces larval hatching by removing the air from the egg-chamber so that the eggs immerse in water. Do the adults provide additional support to the newly hatched larvae to help them leave the life-endangering hypoxic water inside the burrow? This paper compares 18 hatching events of 3 species: dusky gilled mudskipper, Pearse´s mudskipper and slender mudskipper. After air removal 3 different burrow-shape dependent strategies of paternal help for larval burrow leaving were observed: (1) very frequent diving toward the burrow shaft or into the egg-chamber to generate turbulences that can help to propel the larvae toward the water surface; (2) tail-undulation to create a water current out of the burrow that would take along the hatched larvae; and (3) intake of larvae into the paternal mouth, subsequently spitting them out to expel them from the burrow.
DOI: 10.5519/qd.olo7ziov
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (73028 records)
DOI: 10.25934/pr00004737.2
title: Available IPD datapackage for study 'A Phase 2/3 Multicenter, Randomized, Placebo-controlled, Double-blind Study to Evaluate the Safety and Efficacy of Golimumab Induction Therapy, Administered Intravenously, in Subjects With Moderately to Severely Active Ulcerative Colitis'

description: The purpose of this study is to assess the effects (good and bad) of golimumab (CNTO 148) therapy in participants with active ulcerative colitis (UC) (sores in the colon).
DOI: 10.5281/zenodo.8116842
title: A multi-scale study of 3D printed Co-Al2O3 catalyst monoliths versus spheres

description: XRD-CT data presented in the manuscript: "A multi-scale study of 3D printed Co-Al2O3 catalyst monoliths versus spheres" by Clement Jacquot et al. The h5 files contained the integrated and reshaped diffraction datas as well as a native 2theta x axis.
DOI: 10.5281/zenodo.8116841
title: A multi-scale study of 3D printed Co-Al2O3 catalyst monoliths versus spheres

description: XRD-CT data presented in the manuscript: "A multi-scale study of 3D printed Co-Al2O3 catalyst monoliths versus spheres" by Clement Jacquot et al. The h5 files contained the integrated and reshaped diffraction datas as well as a native 2theta x axis.
DOI: 10.25773/xkcn-sh60
title: GIS Data: Prince George’s County, Maryland – Shoreline Inventory Data 2023
DOI: 10.5281/zenodo.8119598
title: Hidden and total fishing activity hotspots in the Mediterranean Sea between 2017 and 2022 estimated from AIS data

description: Hidden and total fishing activity hotspots in the Mediterranean Sea between 2017 and 2022 estimated from AIS data
DOI: 10.5281/zenodo.8119599
title: Hidden and total fishing activity hotspots in the Mediterranean Sea between 2017 and 2022 estimated from AIS data

description: Hidden and total fishing activity hotspots in the Mediterranean Sea between 2017 and 2022 estimated from AIS data
DOI: 10.5281/zenodo.8119692
title: Hidden and total fishing activity hotspots in the Mediterranean Sea between 2017 and 2022 estimated from AIS data

description: Hidden and total fishing activity hotspots in the Mediterranean Sea between 2017 and 2022 estimated from AIS data
DOI: 10.25592/uhhfdm.10389
title: Instance data for "A Branch-and-Cut algorithm for an urban dial-a-ride problem" and "Using fixed paths to improve branch-and-cut algorithms for precedence-constrained routing problems"

description: This data set includes the instances used in the paper "Using fixed paths to improve branch-and-cut algorithms for precedence-constrained routing problems" and the corresponding preprint "A Branch-and-Cut algorithm for an urban dial-a-ride problem". The data set "DARP_TW_data.zip" contains the instances for the final calculations whereas the data set "DARP_TW_components_data.zip" includes the instances used in the preliminary test for the components.
DOI: 10.25592/uhhfdm.10027
title: Instance data for "A Branch-and-Cut algorithm for an urban dial-a-ride problem" and "Using fixed paths to improve branch-and-cut algorithms for precedence-constrained routing problems"

description: This data set includes the instances used in the paper "Using fixed paths to improve branch-and-cut algorithms for precedence-constrained routing problems" and the corresponding preprint "A Branch-and-Cut algorithm for an urban dial-a-ride problem". The data set "DARP_TW_data.zip" contains the instances for the final calculations whereas the data set "DARP_TW_components_data.zip" includes the instances used in the preliminary test for the components.
DOI: 10.5281/zenodo.8120128
title: Seshat Databank: Equinox Release with Culturally and Institutionally Continuous Polities

description: This data is based on the Seshat data release in https://zenodo.org/record/6642230 and aims to dissect the time series of each NGA into culturally and institutionally continuous time series. For both continuity criteria, the central continuous time series is marked in the data (central meaning that this is the time interval during which the NGA has crossed a specified threshold between low-complexity and high-complexity societies). Details can be found in v3 of https://arxiv.org/abs/2212.00563
DOI: 10.5281/zenodo.8120127
title: Seshat Databank: Equinox Release with Culturally and Institutionally Continuous Polities

description: This data is based on the Seshat data release in https://zenodo.org/record/6642230 and aims to dissect the time series of each NGA into culturally and institutionally continuous time series. For both continuity criteria, the central continuous time series is marked in the data (central meaning that this is the time interval during which the NGA has crossed a specified threshold between low-complexity and high-complexity societies). Details can be found in v3 of https://arxiv.org/abs/2212.00563
DOI: 10.25934/pr00004734.2
title: Available IPD datapackage for study 'A Phase 2/3 Multicenter, Randomized, Placebo-controlled, Double-blind Study to Evaluate the Safety and Efficacy of Golimumab Induction Therapy, Administered Subcutaneously, in Subjects With Moderately to Severely Active Ulcerative Colitis'

description: The purpose of this study is to assess the effects (good and bad) of golimumab (CNTO 148) therapy in participants with ulcerative colitis (UC).
DOI: 10.25345/c5gm8200x
title: MassIVE MSV000092352 - LC-MS/MS identification of lactase enzymes produced by Bifidobacterium bifidum
title: LC-MS/MS identification of lactase enzymes produced by Bifidobacterium bifidum
DOI: 10.5519/qd.sd79pqn7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (72831 records)
DOI: 10.25934/pr00004736.5
title: Available IPD datapackage for study 'A Phase 3 Multicenter, Randomized, Placebo-controlled, Double-blind Study to Evaluate the Safety and Efficacy of Golimumab Maintenance Therapy, Administered Subcutaneously, in Subjects With Moderately to Severely Active Ulcerative Colitis'

description: The purpose of this study is to assess the safety and efficacy of golimumab administered subcutaneously (under the skin) injections in maintenance therapy.
DOI: 10.21227/jzaf-1c51
title: Twitter Fake News Dataset Processed for Multivariate Hawkes Processes Modeling

description: Title: Twitter Fake News Dataset Processed for Multivariate Hawkes Processes Modeling This dataset is about the fake news story "Head of Pfizer Research: Covid Vaccine is Female Sterilization" which is propagated on Twitter in December 2020.The dataset is collected through Twitter API v2 and processed for modeling using Multivariate Hawkes Point Processes, which is used for investigating the influence between tweet types and user stances toward the fake news story within the Twitter user networks. It contains two files:1) One for processed tweet data, which contains tweet id, tweet text, standardized tweet posting time, tweet type, influence connection and labeled user stance towards the fake news story.2) The other is the extracted sample for checking the labeling result on the tweet stance from two annotators.
DOI: 10.25773/7xnw-2b65
title: GIS Data: Harford County, Maryland – Shoreline Inventory Data 2023
DOI: 10.17909/x4rt-ks41
title: HST WFC3/UVIS spatially-scanned photometery of LTT 1445 Ac

description: Described in Pass et al. (2023)
DOI: 10.6084/m9.figshare.23634856
title: Supplementary methods, figures and tables from Exceptionally high respiration rates in the reactive surface layer of sediments underlying oxygen-deficient bottom waters

description: Organic carbon (OC) burial efficiency, which relates the OC burial rate to respiration in the seafloor, is a critical parameter in the reconstruction of past marine primary productivities. The current accepted theory is that sediments underlying oxygen-deficient (anoxic) bottom waters have low respiration rates and high OC burial efficiencies. By combining novel <i>in situ</i> measurements in anoxic basins with reaction-transport modelling, we demonstrate that sediments underlying anoxic bottom waters have much higher respiration rates than commonly assumed. A major proportion of the carbon respiration is concentrated in the top millimeter—the so-called ‘reactive surface layer’—which is likely a feature in approximately 15% of the coastal seafloor. When re-evaluating previously published data in light of our results, we conclude that the impact of bottom-water anoxia on OC burial efficiencies in marine sediments is small. Consequently, reconstructions of past marine primary productivity in a predominantly anoxic ocean based on OC burial rates might be underestimated by up to an order of magnitude.
DOI: 10.17037/data.00003540
title: Dataset for: Developing HIV risk prediction tools in four African settings

description: A quantitative dataset collected as part of an on-going HIV vaccine preparedness study “The PrEPVacc Registration Cohort”. The study was set up at sites in Masaka, Uganda; Durban, South Africa; Maputo, Mozambique; Mbeya and Dar es Salaam, Tanzania, to prepare a population of HIV negative individuals at risk of acquiring HIV for possible participation in the PrEPVacc HIV vaccine efficacy and pre-exposure prophylaxis trial. It contains information on demographic, HIV risk behavioural characteristics, HIV prevalence at screening and incidence during follow up, among participants.
DOI: 10.25773/k27z-wy29
title: GIS Data: Cecil County, Maryland – Shoreline Inventory Data 2023
DOI: 10.25773/bt9v-g868
title: GIS Data: Caroline County, Maryland – Shoreline Inventory Data 2023
DOI: 10.34740/kaggle/dsv/6082430
title: New York City Airbnb 2023, Public Data
DOI: 10.2909/5d9a4d94-511a-486d-afbb-4f01e5c73e23
title: Bathing Water Directive - Status of bathing water, 2022

description: The EU Bathing Waters Directive requires Member States to identify popular bathing places in fresh and coastal waters and monitor them for indicators of microbiological pollution (and other substances) throughout the bathing season which runs from May to September
DOI: 10.5281/zenodo.7922188
title: Supplementary information for the manuscript 'Mutation in SHAGGY-like kinase AsGSK2.1 causes a short kernel phenotype in oat (Avena sativa)'

description: This is the supplementary information of the manuscript 'Mutation in SHAGGY-like kinase AsGSK2.1 causes a short kernel phenotype in oat (<em>Avena sativa</em>)' published as a part of the thesis 'Annotating and making use of the <em>Avena sativa</em> cv. Sang reference genome' by Nikos Tsardakas Renhuldt. SI.pdf contains supplementary figures 1-3. Supplementary figure 4.html contains supplementary figure 4. Supplementary tables.xlsx contains supplementary tables 1-5.
DOI: 10.5281/zenodo.7922187
title: Supplementary information for the manuscript 'Mutation in SHAGGY-like kinase AsGSK2.1 causes a short kernel phenotype in oat (Avena sativa)'

description: This is the supplementary information of the manuscript 'Mutation in SHAGGY-like kinase AsGSK2.1 causes a short kernel phenotype in oat (<em>Avena sativa</em>)' published as a part of the thesis 'Annotating and making use of the <em>Avena sativa</em> cv. Sang reference genome' by Nikos Tsardakas Renhuldt. SI.pdf contains supplementary figures 1-3. Supplementary figure 4.html contains supplementary figure 4. Supplementary tables.xlsx contains supplementary tables 1-5.
DOI: 10.5281/zenodo.7924641
title: Supplementary information for the manuscript 'GFViz: A tutorial on creating interactive visualization of genomic features using R Tidyverse and plotly'

description: This is the supplementary information of the manuscript 'GFViz: A tutorial on creating interactive visualization of genomic features using R Tidyverse and plotly' published as a part of the thesis 'Annotating and making use of the <em>Avena sativa</em> cv. Sang reference genome' by Nikos Tsardakas Renhuldt.