cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/cc3d3sc
title: CCDC 101022: Experimental Crystal Structure Determination

description: Related Article: E.H.Licht, H.G.Alt, W.Milius, S.Abu-Orabi|1998|J.Organomet.Chem.|560|69|doi:10.1016/S0022-328X(98)00477-X
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3f4c0
title: CCDC 102001: Experimental Crystal Structure Determination

description: Related Article: R.Hauptmann, R.Kliss, J.Schneider, G.Henkel|1998|Z.Anorg.Allg.Chem.|624|1927|doi:10.1002/(SICI)1521-3749(1998110)624:11<1927::AID-ZAAC1927>3.3.CO;2-G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.8k3gek
title: Occurrence Download

description: A dataset containing 970474 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sturnus vulgaris",
 "HasCoordinate is true",
 "Country is France"
 ]
}

 The dataset includes 970474 records from 4814 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001495-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6075/j03t9gmx
title: CIL: 50858, Saccharomyces cerevisiae (baker's yeast, budding yeast), Mixed population of S. cerevisiae cells. In Cell Image Library

description: Imaging mode: transmission electron microscopy (TEM)
Visualization methods: Stain with Uranyl acetate and Lead citrate
description: Wild type Saccharomyces cerevisiae cells (S228C background) were treated with 1 mg/ml of the proline analogue azetidine-2-carboxylic acid (AZC) for 30 and 90 minutes. Then, samples were high pressure frozen and visualized through transmission electron microscopy (TEM). The images show the nucleus of the cells and the black arrow indicates nuclear envelope budding events.
description: Treated cells were cultured in YPD medium and high pressure frozen in a Wohlwend Compact 3 machine, followed by a short freeze substitution protocol in 2% Uranyl acetate and embedded in HM20 resin. Sections of 70 nm thickness were then contrast stained with 2% Uranyl acetate and Reynold's lead citrate. Pictures were aquired in a Tecnai T12 TEM with a Ceta CMOS 16M camera.
DOI: 10.6075/j00k27fs
title: CIL:40476, Homo sapiens, osteosarcoma. In Cell Image Library

description: The use of data and images from this site in publications and presentations is permitted provided that the following conditions are met:

The publication and/or presentation are solely for informational and non-commercial purposes.

The source of the data and/or image is referred to this site (www.proteinatlas.org) and/or the above publication is cited.
description: Single slice confocal images representing one optical slice of a cell stained for the Human Protein Atlas (HPA) antibody HPA028696 (shown in green). HPA028696 is a polyclonal Anti-ENAH antibody that is lcalized to focal adhesion sites, the cytoplasm and plasma membrane. The cells are also stained with reference markers in order to facilitate the annotation of the subcellular distribution of the protein targeted by the HPA antibody. The following probes/organelles are used as references; (i) DAPI for the nucleus (blue) and (ii) anti-tubulin antibody as internal control and marker of microtubules (red).
description: Preparation: chemically fixed tissue; permeabilized tissue
Relation to intact cell: dispersed cells in vitro
Item type: recorded image
Imaging mode: confocal microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope
Visualization methods: primary antibody plus labeled secondary antibody
Processing history: unprocessed raw data
Data qualification: Raw
DOI: 10.6075/j09w0d4z
title: CIL:37150, Cavia porcellus, liver cell. In Cell Image Library

description: Preparation: cell fractionation
Relation to intact cell: sectioned tissue
Item type: recorded image
Imaging mode: transmission electron microscopy (TEM)
Parameter imaged: electron density
Source of contrast: differences in adsorption or binding of stain
description: Original 3.25 in. x 4 in. lantern slides were scanned at 600dpi. Original Magnification: x6,000.
description: Transmission electron micrograph of a the nuclear fraction of a cell fractionation from a guinea pig liver. Image made available by James D. Jamieson and the Department of Cell Biology, Yale University School of Medicine.
DOI: 10.6075/j00k27zh
title: CIL:41719, Cricetulus griseus, ovary. In Cell Image Library

description: Cells were metaphase arrested with thymidine followed by colcemid, then exposed to a low ionic strength swelling medium (0.07M phosphate buffer). Chromosomes were isolated by the non-aqueous hexylene glycol technique of Wray and Stubblefield, squashed in 1:1 acetic acid:ethanol,stained, and transferred to an EM grid.
See also: H. Ris 1981 Stereoscopic electron microscopy of chromosomes. Meth Cell Biol 22:77-96 H. Ris 1978 Preparation of chromatin and chromosomes for electron microscopy. Meth Cell Biol 18:220-246.
description: High Voltage (1MeV) EM image of metaphase chromosomes isolated from CHO cells using a non-aqueous technique, squashed in 1:1 acetic acid:ethanol and transferred to an EM grid. A chromatid pair occupies the center of the image. This micrograph was captured at a specimen tilt of 55 degrees. The accompanying image has a tilt of 45 degrees, creating a stereo pair that provides an oblique stereo view of the chromatids.
description: Preparation: chemically fixed tissue
Relation to intact cell: isolated subcellular component
Item type: film
Parameter imaged: electron density
Source of contrast: differences in adsorption or binding of stain
Visualization methods: uranyl salt
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
DOI: 10.6075/j0jm29gc
title: CIL:36902, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: This is IMAGE #1 (day 1) of a time lapse series contained with in this image group. It shows a neuron in the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47.
 
 The images were acquired daily over 3 days and show dendritic arbor development and morphological plasticity of the dendritic arbor with branch additions and retractions.
 
 This cell was transfected ~24 hours earlier with in vivo electroporation of plasmid DNA encoding eYFP. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EYFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
DOI: 10.6075/j0z31zgd
title: CIL:37092, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
description: This is IMAGE #4 (day 3) of a time lapse series contained with in this image group. It is a second view of a neuron from the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47. Autofluorescent pigment cells are visible in the superficial layers of the z-stack. 
 
 The images were acquired daily over 3 days and show dendritic arbor development and morphological plasticity of the dendritic arbor with branch additions and retractions.
 
 The cell was transfected with in vivo electroporation of plasmid DNA encoding eYFP ~24 hours before the first image was acquired. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EYFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
DOI: 10.6075/j0d21xf7
title: CIL:37106, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
description: This is IMAGE #4 (day 3) of a developing neuron from the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47. 
 The cell was imaged daily over 3 days and shows the development of the dendritic arbor and axon over time. This is a lower zoom image of same time point shown in IMAGE #3.
 
 The cell was transfected with in vivo electroporation of plasmid DNA encoding eGFP ~24 hours before the image was acquired. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EGFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
DOI: 10.6075/j0q81cxr
title: CIL:36891, Xenopus laevis, CNS neuron (sensu Vertebrata). In Cell Image Library

description: This is IMAGE #9 (second time-lapse set, 30 minutes) of a time lapse series contained with in this image group. It shows neurons from the optic tectum of an albino Xenopus laevis tadpole CNS, stage 47.
 
 The images were acquired with ~10 minute intervals and show morphological plasticity of the dendritic arbor with branch additions and retractions.
 
 These cells were transfected ~24 hours earlier with in vivo electroporation of plasmid DNA encoding eYFP. The intact, living tadpole was anesthetized, positioned under a glass coverslip and this image was taken directly through its transparent skin using a custom built two-photon microscope.
 
 Images were acquired a 0, 10, 20, 30, and 50 minutes. After 60 minutes, the animal was placed in a 50 microMolar anisomycin solution for ~4 hours. A second time lapse series (10 minute interval for 60 minutes) was then acquired.
description: Specifications of the custom built two-photon microscope, including the laser sources, signal amplification, PMT specifications, and YFP filter sets are described in: 
Ruthazer ES, Li J, Cline HT. 2006. Stabilization of axon branch dynamics by synaptic maturation. J Neurosci 26(13):3594-3603. 

The methods of cell transfection with electroporation can be found here: 
Bestman JE, Ewald RC, Chiu S-L, Cline HT. 2006. In vivo single-cell electroporation for transfer of DNA and macromolecules. Nat Protocols 1(3):1267-1272. 

Further explanation can be found here:
Bestman JE, Cline HT. 2008. The RNA binding protein CPEB regulates dendrite morphogenesis and neuronal circuit assembly in vivo. Proc Natl Acad Sci U S A 105(51):20494-20499.

Bestman JE, Cline HT. 2009. The Relationship between Dendritic Branch Dynamics and CPEB-Labeled RNP Granules Captured in Vivo. Front Neural Circuits 3:10.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: multi-photon microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EYFP
Processing history: unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
DOI: 10.5285/6244cca4-8eaa-41a0-a9c1-d89167b02b85
title: GPS data relating to the growth of Halloween Crack, Brunt Ice Shelf from 2016 to 2023

description: The dataset consists of GPS data recorded from four sites close to Halley VI Research Station providing information on the width of an active rift propagating through the ice shelf. GPS sites advect with flow of the ice shelf. The data were collected as part of the Lifetime-of-Halley monitoring programme.

This work was partially funded by NERC grant NE/X014991/1 (RIFT-TIP) and supported by NERC Antarctic Logistics and Infrastructure.
description: The GPS sites were installed between 2016 and 2017 and recorded for 2 hours 15 minutes each day at 30 second resolution. Data was converted from raw Leica format (*.m00) to standard Rinex v2 format using UNAVCO's teqc.exe program. Details in Morris et al., 2025.
description: Data collected using Leica GS10 and Leica GX1200 GPS.
description: Dual frequency Raw GPS data have been converted into 5 minute Rinex files. The GPS data are mostly available for each day, although with some gaps in austral winter (July/August).
DOI: 10.25549/inscriptifact-ouc112051888
title: Qubur al-Walaydah Bowl, IAA 1979-567

description: [Text Description:] Two personal names, word dividers used, end of inscription enigmatic. Inscription etched into fired bowl. ❧ [Text or Publication Number Note:] IAA 1979-567 ❧ [Excavation Description:] Found by Rudolph Cohen in 1977. Qubur al-Walaydah, Area B, Locus 11. ❧ [Medium:] Clay ❧ [Script Note:] Linear Canaanite, Early Alphabetic ❧ [Physical Object Description:] Bowl fragments (2) measuring 10cm in width. Found by Rudolph Cohen in 1977. ❧ [Physical Object Note:] Clay pot sherd
DOI: 10.15468/dl.7dd35g
title: Occurrence Download

description: A dataset containing 157473 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caretta caretta (Linnaeus, 1758)"
 ]
}

 The dataset includes 157473 records from 561 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0232625-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4hmk6j
title: Occurrence Download

description: A dataset containing 4417 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myadestes townsendi (Audubon, 1838)",
 "HasCoordinate is True",
 "Country is United States of America",
 "Year is greater than or equal to 1999",
 "Year is less than or equal to 2001",
 "Month is greater than or equal to January",
 "Month is less than or equal to December",
 "HasGeospatialIssue is False",
 "DecimalLatitude is greater than or equal to 24.5",
 "DecimalLatitude is less than or equal to 49.5",
 "DecimalLongitude is greater than or equal to -125.0",
 "DecimalLongitude is less than or equal to -66.5"
 ]
}

 The dataset includes 4417 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0383134-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qdjtsv
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "OccurrenceStatus is Present",
 "TaxonKey is Cotoneaster horizontalis Decne."
 ]
}

 The dataset includes 52 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0123006-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ge4u9
title: Occurrence Download

description: A dataset containing 11781 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lithodes santolla (Molina, 1782)"
 ]
}

 The dataset includes 11781 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0274635-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112052078
title: Baal Myth Fifth Tablet

description: [Text Description:] Baal enters underworld, his body is discovered, El and Anat mourn him ❧ [Text or Publication Number Note:] KTU 1.5; CTA 5; CAT 1.5; KTU2 1.5; CTU 1.5; RS 2.[022]; RS 3.[565] ❧ [Excavation Description:] Excavations at Ras Shamra 1930. Found in Library of the High Priest, p. t. 210-264, Acropolis, excavated by Claude F.-A. Schaeffer, Mission Archeologique Francaise. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet, 14.5 cm. X 15.6 cm., 6 fragments ❧ [Physical Object Note:] Grey clay, six columns, incomplete
DOI: 10.15468/dl.jdrvq3
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio almeidae Phil."
 ]
}

 The dataset includes 21 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0123108-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w7zaxt
title: Occurrence Download

description: A dataset containing 3249 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Axis axis (Erxleben, 1777)"
 ]
}

 The dataset includes 3249 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0401930-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112052120
title: Baal Myth Fifth Tablet

description: [Text Description:] Baal enters underworld, his body is discovered, El and Anat mourn him ❧ [Text or Publication Number Note:] KTU 1.5; CTA 5; CAT 1.5; KTU2 1.5; CTU 1.5; RS 2.[022]; RS 3.[565] ❧ [Excavation Description:] Excavations at Ras Shamra 1930. Found in Library of the High Priest, p. t. 210-264, Acropolis, excavated by Claude F.-A. Schaeffer, Mission Archeologique Francaise. ❧ [Medium:] Clay ❧ [Script Note:] Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet, 14.5 cm. X 15.6 cm., 6 fragments ❧ [Physical Object Note:] Grey clay, six columns, incomplete
DOI: 10.15468/dl.59dqyr
title: Occurrence Download

description: A dataset containing 236250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Athene cunicularia (Molina, 1782)"
 ]
}

 The dataset includes 236250 records from 136 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0383140-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8mr5ff
title: Occurrence Download

description: A dataset containing 1952 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Viola variegata Fisch. ex Link"
 ]
}

 The dataset includes 1952 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0232620-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q7pbax
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Escalloniales",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0255822-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112049375
title: Cuneiform Tablet 1913.14.1506, Spurlock 1913.14.1506

description: [Text Description:] Account concerning silver, barley, and refined bitumen ❧ [Text or Publication Number Note:] Spurlock 1913.14.1506; CDLI P421358 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/2) Light Brown (5YR 6.5/4) Dark Gray (N 3/ 6.6% R) ❧ [Physical Object Note:] 10.1 x 6.9 x 2.9 cm (213g)
DOI: 10.15468/dl.dgxfyd
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio appendiculatus L.f."
 ]
}

 The dataset includes 42 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0123143-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.