cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15658213
title: Table 1 in Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae)

description: Table 1. — Study sites and voucher information for species studied. Vouchers are housed at MO (GOLDBLATT) or at NBG (other collectors). All study sites in South Africa.
SpeciesStudy siteVoucherS. auriculata Goldblatt & J.C. ManningWestern Cape, Gifberg slopesGoldblatt & Manning 10966S. bulbifera (L.) Ker Gawl.Western Cape, DarlingKurzweil 1272S. caryophyllacea GoldblattWestern Cape, Nardouw Mts.Goldblatt 10671S. elegans (Sweet) GoldblattNorthern Cape, NieuwoudtvilleLewis 5909S. fragrans (Jacq.) Ker Gawl.Western Cape, Bot RiverGoldblatt & Manning 10012S. galeata Ker Gawl.Western Cape, Vanrhyn’s PassGoldblatt 7234AS. grandiflora (Delaroche) Ker Gawl. subsp. fimbriata (Lam.) GoldblattWestern Cape, Cape TownGoldblatt & Manning 9789subsp. acutiloba GoldblattWestern Cape, N of CitrusdalGoldblatt & Manning 10368S. maculosa Goldblattnot studiedS. metelerkampiae (L. Bolus) Goldblatt & J.C. ManningWestern Cape, Pakhuis PassGoldblatt & Manning 10386S. parviflora (G.J. Lewis) GoldblattWestern Cape, Versveld Reserve, DarlingGoldblatt & Manning 10358S. pillansii L. BolusNorthern Cape, E of NieuwoudtvilleGoldblatt & Manning 10429S. roxburghi (Baker) GoldblattWestern Cape, N of CitrusdalGoldblatt & Manning 10333S. tricolor (Schneev.) Ker Gawl.Northern Cape, Grasberg road,Goldblatt & Manning 10341NW of NieuwoudtvilleS. villosa (Burm.f.) GoldblattWestern Cape, near MalmesburyGoldblatt & Manning 10338Western Cape, Darling NatureGoldblatt s.n. (no voucher)ReserveS. variegata (Sweet) GoldblattWestern Cape, N of ClanwilliamGoldblatt 10568
description: Published as part of Goldblatt, Peter, Manning, John C. & Bernhardt, Peter, 2000, Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae), pp. 60 in Adansonia (3) 22 (1) on page 60, DOI: 10.5281/zenodo.4605782
DOI: 10.5281/zenodo.15658214
title: Table 2 in Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae)

description: Table 2. — Floral characteristics of Sparaxis species arranged according to flower type. Measurements of the perianth tube are for the lower cylindrical portion that excludes all but an insects proboscis. + = presence, - = absence, n/a = data not available, trace indicates nectar volume too little to measure volumetrically.
SpeciesFlower shapeFlower colorLower tube (mm)Tube openNectarSelf incompatibleFlowering timeS. auriculatafunnelviolet and yellowca.18no+yesSep.S. bulbiferabowlcream12-16yes+noSep.S. caryophyllaceafunnelviolet and yellowca. 20no+yesSep.S. eleganssalversalmon and purple6-8no+noAug.-Sep.S. fragranssalverpale yellow or buff6-8notracenoAug.-Sep.S. galeatafunnelmauve and yellowca. 15yes–yesJuly-Aug.S. grandiflorasalverwhite, yellow or purple10-14notracenoAug.-Sep.S. maculosasalveryellow, black centerca. 2.5non/an/aSep.S. metelerkampiaetubedark purple45-50yes+noAug.-Sep.S. parviflorafunnelcream and yellowca. 8notracenoAug.-Sep.S. pillansiibowlrose pink and yellow7-9notracenoOct.S. roxburghiitubemauve and yellow20-30yes+n/aSep.S. tricolorbowlscarlet, yellow and blackca. 8notracenoSep.S. variegatatubeviolet and yellow30-35yes+yesAug.-Sep.S. villosafunnelviolet and yellow15-18yes+noAug.-Sep.
description: Published as part of Goldblatt, Peter, Manning, John C. & Bernhardt, Peter, 2000, Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae), pp. 63 in Adansonia (3) 22 (1) on page 63, DOI: 10.5281/zenodo.4605782
DOI: 10.5281/zenodo.15658215
title: Table 2 in Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae)

description: Table 2. — Floral characteristics of Sparaxis species arranged according to flower type. Measurements of the perianth tube are for the lower cylindrical portion that excludes all but an insects proboscis. + = presence, - = absence, n/a = data not available, trace indicates nectar volume too little to measure volumetrically.
SpeciesFlower shapeFlower colorLower tube (mm)Tube openNectarSelf incompatibleFlowering timeS. auriculatafunnelviolet and yellowca.18no+yesSep.S. bulbiferabowlcream12-16yes+noSep.S. caryophyllaceafunnelviolet and yellowca. 20no+yesSep.S. eleganssalversalmon and purple6-8no+noAug.-Sep.S. fragranssalverpale yellow or buff6-8notracenoAug.-Sep.S. galeatafunnelmauve and yellowca. 15yes–yesJuly-Aug.S. grandiflorasalverwhite, yellow or purple10-14notracenoAug.-Sep.S. maculosasalveryellow, black centerca. 2.5non/an/aSep.S. metelerkampiaetubedark purple45-50yes+noAug.-Sep.S. parviflorafunnelcream and yellowca. 8notracenoAug.-Sep.S. pillansiibowlrose pink and yellow7-9notracenoOct.S. roxburghiitubemauve and yellow20-30yes+n/aSep.S. tricolorbowlscarlet, yellow and blackca. 8notracenoSep.S. variegatatubeviolet and yellow30-35yes+yesAug.-Sep.S. villosafunnelviolet and yellow15-18yes+noAug.-Sep.
description: Published as part of Goldblatt, Peter, Manning, John C. & Bernhardt, Peter, 2000, Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae), pp. 63 in Adansonia (3) 22 (1) on page 63, DOI: 10.5281/zenodo.4605782
DOI: 10.5281/zenodo.15658216
title: Table 3 in Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae)

description: Table 3. — Nectar properties of Sparaxis species that produce measurable quantities of nectar (Table 2); n/a = data not available. Nectar sugars were analyzed by B.-E. VAN WYK.
SpeciesVolume µl (n)Mean% sugar (SD)FructoseGlucoseSucroseMean Sucrose Glu+Fru (n)S. auriculata0.8-1.2(2)39-42n/an/an/an/aS. bulbifera1.2-1.8(3)38.0(3.2)13-1517-1868-702.19(3)S. caryophyllacea0.8-1.6(7)26.1(2.8)n/an/an/an/aS. metelerkampiae1.4-2.2(6)28.5(3.4)1-124-2270-953.23(4)sample 21.6-3.9(4)25.8(1.9)7-204-2254-801.98(3)S. roxburghii1.3-1.8(3)29.3(1.5)n/an/an/an/aS. variegata1.2-2.4(10)28.2(1.3)n/an/an/an/aS. villosa1.1-1.5(7)24.3(2.0)n/an/an/an/a
description: Published as part of Goldblatt, Peter, Manning, John C. & Bernhardt, Peter, 2000, Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae), pp. 64 in Adansonia (3) 22 (1) on page 64, DOI: 10.5281/zenodo.4605782
DOI: 10.5281/zenodo.15658217
title: Table 3 in Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae)

description: Table 3. — Nectar properties of Sparaxis species that produce measurable quantities of nectar (Table 2); n/a = data not available. Nectar sugars were analyzed by B.-E. VAN WYK.
SpeciesVolume µl (n)Mean% sugar (SD)FructoseGlucoseSucroseMean Sucrose Glu+Fru (n)S. auriculata0.8-1.2(2)39-42n/an/an/an/aS. bulbifera1.2-1.8(3)38.0(3.2)13-1517-1868-702.19(3)S. caryophyllacea0.8-1.6(7)26.1(2.8)n/an/an/an/aS. metelerkampiae1.4-2.2(6)28.5(3.4)1-124-2270-953.23(4)sample 21.6-3.9(4)25.8(1.9)7-204-2254-801.98(3)S. roxburghii1.3-1.8(3)29.3(1.5)n/an/an/an/aS. variegata1.2-2.4(10)28.2(1.3)n/an/an/an/aS. villosa1.1-1.5(7)24.3(2.0)n/an/an/an/a
description: Published as part of Goldblatt, Peter, Manning, John C. & Bernhardt, Peter, 2000, Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae), pp. 64 in Adansonia (3) 22 (1) on page 64, DOI: 10.5281/zenodo.4605782
DOI: 10.5281/zenodo.15658218
title: Table 4 in Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae)

description: Table 4. — Pollen load analysis of captured insects on sparaxies. Coleoptera: Scarabaeidae: Anisochelus, Clania, Platychelus, Lepithrix, Peritrichia. Hymenoptera: Apidae: Anthophora; Apis. Halictidae: Petalapis. Diptera: Nemestrinidae: Prosoeca. Tabanidae: Mesomyia, Philoliche.
Plant and [insect] taxonNumber of insects carrying pollen load(s)Host flr. onlyHost flr. + other sp.Other sp. onlyNo pollenS. auriculata [Anthophora diversipes]0200S. bulbifera[Apis mellifera]0300[Lepithrix ornatella]0200[Mesomyia edentula]2200S. caryophyllacea[Anthophora diversipes]0200[Anisochelus sp.]2300S. elegans[Clania glenlyonensis]1500[Anisochelus inornatus]0510[Philoliche atricornis]0600S. fragrans[Apis mellifera]0300[Halictidae]0200[Platychelus sp.]0400S. galeata [Anthophora diversipes]0100S. grandiflora subsp. acutiloba[Apis mellifera]0200[Petallapis sp.]0300[Philoliche atricornis]0300[Peritrichia sp.]0200[Anisochelus inornatus]2400[Peritrichia rufotibialis]0200subsp. fimbriata[Anisochelus inornatus]0200[Peritrichia capicols]0200S. metelerkampiae [Prosoeca peringueyi]0300S. parviflora [Apis mellifera]2300S. tricolor[Anisochelus inornatus]0200[Philoliche atricornis]0300S. pillansii[Clania glenlyonensis]1711[Philoliche atricornis]0200S. variegata [Anthophora diversipes]0200S. villosa [Anthophora diversipes]0500Total108721
description: Published as part of Goldblatt, Peter, Manning, John C. & Bernhardt, Peter, 2000, Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae), pp. 65 in Adansonia (3) 22 (1) on page 65, DOI: 10.5281/zenodo.4605782
DOI: 10.5281/zenodo.15658219
title: Table 4 in Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae)

description: Table 4. — Pollen load analysis of captured insects on sparaxies. Coleoptera: Scarabaeidae: Anisochelus, Clania, Platychelus, Lepithrix, Peritrichia. Hymenoptera: Apidae: Anthophora; Apis. Halictidae: Petalapis. Diptera: Nemestrinidae: Prosoeca. Tabanidae: Mesomyia, Philoliche.
Plant and [insect] taxonNumber of insects carrying pollen load(s)Host flr. onlyHost flr. + other sp.Other sp. onlyNo pollenS. auriculata [Anthophora diversipes]0200S. bulbifera[Apis mellifera]0300[Lepithrix ornatella]0200[Mesomyia edentula]2200S. caryophyllacea[Anthophora diversipes]0200[Anisochelus sp.]2300S. elegans[Clania glenlyonensis]1500[Anisochelus inornatus]0510[Philoliche atricornis]0600S. fragrans[Apis mellifera]0300[Halictidae]0200[Platychelus sp.]0400S. galeata [Anthophora diversipes]0100S. grandiflora subsp. acutiloba[Apis mellifera]0200[Petallapis sp.]0300[Philoliche atricornis]0300[Peritrichia sp.]0200[Anisochelus inornatus]2400[Peritrichia rufotibialis]0200subsp. fimbriata[Anisochelus inornatus]0200[Peritrichia capicols]0200S. metelerkampiae [Prosoeca peringueyi]0300S. parviflora [Apis mellifera]2300S. tricolor[Anisochelus inornatus]0200[Philoliche atricornis]0300S. pillansii[Clania glenlyonensis]1711[Philoliche atricornis]0200S. variegata [Anthophora diversipes]0200S. villosa [Anthophora diversipes]0500Total108721
description: Published as part of Goldblatt, Peter, Manning, John C. & Bernhardt, Peter, 2000, Adaptive radiation of pollination mechanisms in Sparaxis (Iridaceae: Ixioideae), pp. 65 in Adansonia (3) 22 (1) on page 65, DOI: 10.5281/zenodo.4605782
DOI: 10.15468/dl.nbyj53
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Marsilea villifolia Bremek. & Oberm. ex Alston & Schelpe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.2855 -34.7533,20.509 -34.5676,20.509 -32.9007,17.7723 -32.9007,17.8156 -33.0786,18.3471 -33.7176,18.3748 -33.8287,18.2181 -34.0492,18.3197 -34.3408,18.4452 -34.429,18.5435 -34.4213,18.5872 -34.3667,18.5363 -34.167,18.7345 -34.1508,18.7216 -34.3637,18.7808 -34.4521,19.0289 -34.4206,19.0831 -34.4835,19.2655 -34.5017,19.2032 -34.6157,19.2394 -34.6926,19.375 -34.6963,19.6091 -34.8524,19.8251 -34.8396,19.9798 -34.9064,20.1081 -34.8731,20.1517 -34.7847,20.2855 -34.7533))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043486-250525065834625/datasets/export for details.
DOI: 10.15468/dl.kbx2p8
title: Occurrence Download

description: A dataset containing 197107 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leontodon hispidus L.",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "Year is greater than or equal to 1900",
 "Year is less than or equal to 2010"
 ]
}

 The dataset includes 197107 records from 698 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043468-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/jpgz9r
title: The BGE Project dataset (part 1)

description: This dataset contains the samples generated in the Biodiversity Genomics Europe (BGE ) project that are stored in the Biobank of the MNCN.
DOI: 10.5281/zenodo.14950826
title: somaye-s/Paper-data-O-C: O-C Data for Six Contact Binary Systems

description: This repository contains the O-C (Observed minus Calculated) data for six contact binary systems. The dataset includes:
Observational eclipse times
Corresponding epochs
O-C values
Associated errors.
This data can be used to analyze period variations and study mass transfer effects in these binary systems.
MS-Leo.txt
MY Leo.txt
OP-Leo.txt
V0339.txt

NT Boo.txt
NZ-Leo.txt
DOI: 10.5281/zenodo.14950825
title: somaye-s/Paper-data-O-C: O-C Data for Six Contact Binary Systems

description: This repository contains the O-C (Observed minus Calculated) data for six contact binary systems. The dataset includes:
Observational eclipse times
Corresponding epochs
O-C values
Associated errors.
This data can be used to analyze period variations and study mass transfer effects in these binary systems.
MS-Leo.txt
MY Leo.txt
OP-Leo.txt
V0339.txt

NT Boo.txt
NZ-Leo.txt
DOI: 10.5281/zenodo.15658134
title: GenB_Dataset_Final

description: This dataset describes the final management of all the data generated during GenB activities, including how data are collected, managed, stored and made available during the project and how they will be shared upon project completion.
DOI: 10.5281/zenodo.15658135
title: GenB_Dataset_Final

description: This dataset describes the final management of all the data generated during GenB activities, including how data are collected, managed, stored and made available during the project and how they will be shared upon project completion.
DOI: 10.15468/dl.4q3dnp
title: Occurrence Download

description: A dataset containing 240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Leopardus wiedii (Schinz, 1821)"
 ]
}

 The dataset includes 240 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043488-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8xuwe6
title: Occurrence Download

description: A dataset containing 365 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección Herpetológica de la Patagonia"
 ]
}

 The dataset includes 365 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043487-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dkxqzy
title: Occurrence Download

description: A dataset containing 365 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección Herpetológica de la Patagonia"
 ]
}

 The dataset includes 365 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043491-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nudkbg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Marsilea villifolia Bremek. & Oberm. ex Alston & Schelpe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.628 -23.023,35.6007 -22.9702,35.6007 -23.165,35.628 -23.023))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043490-250525065834625/datasets/export for details.
DOI: 10.15468/dl.pm7mhk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyclostephanos dubius (Fricke) Round",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.529 -24.0715,20.509 -24.0455,20.509 -24.0715,20.529 -24.0715))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043489-250525065834625/datasets/export for details.
DOI: 10.15468/dl.wh2wac
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (India, China, Myanmar, Nepal, Bhutan, Bangladesh, Pakistan, Afghanistan)",
 "TaxonKey is Miletus mallus (Fruhstorfer, 1913)"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043492-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15658180
title: Recursive Mirror Ethics in AI Dialogue

description: 此為一套哲學語場遞進模型與對話狀態機,設計用於生成式語言模型之倫理鏡映研究。內含六階語境轉換流程,搭配對應判別條件與生成邏輯,提供未來心智哲學研究、語場責任結構觀測與 AI 對話誠實性實驗基礎架構。

本模組僅供非商業、非衍生使用,嚴禁改寫轉載。原創封存日期:2025/6/13。
DOI: 10.15468/dl.wh7smm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Marsilea villifolia Bremek. & Oberm. ex Alston & Schelpe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.6306 -23.844,35.6007 -23.8125,35.6007 -24.0157,35.6306 -23.844))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043494-250525065834625/datasets/export for details.
DOI: 10.15468/dl.sxjkn3
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyclotella (F.T.Kützing) A.de Brébisson, 1838",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.0214 -34.0501,25.5395 -34.1098,25.5395 -32.9007,20.509 -32.9007,20.509 -34.5676,20.524 -34.555,20.8859 -34.5419,20.9606 -34.4398,21.2995 -34.5131,21.5296 -34.4338,21.8696 -34.4439,22.0323 -34.2835,22.221 -34.2428,22.2566 -34.1304,22.5993 -34.0741,22.9652 -34.1674,23.4069 -34.1858,23.4955 -34.0792,23.6056 -34.0563,24.8471 -34.2877,24.9447 -34.2397,25.0214 -34.0501))"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043496-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18150/kiquec
title: Natural protein variants in the saliva of patients with Warthin's tumor

description: Natural protein variants in the saliva of patients with Warthin's tumorWarthin's tumor, also known as papillary cystadenoma lymphomatosum, is one of the most common types of salivary gland (SG) tumors. Although it is generally accepted that the most common type of SG tumor is a mixed tumor (pleomorphic adenoma), research indicates that Warthin's tumors are increasingly becoming the predominant type. Therefore, a better understanding of these tumors seems to be a promising and important research topic.The classical approach to the diagnosis of SG cancers is based on imaging techniques and fine needle biopsy, followed by histopathological analysis of the removed tumors. The use of saliva as a diagnostic material remains unexplored, although it allows non-invasive testing for the patient.In the present study, we performed proteomic analysis of saliva samples collected from patients with Warthin's tumor and control samples from healthy subjects .The results of our previous research on the proteome composition of saliva from patients with salivary gland tumors suggest the presence of certain sequence variants that may be potential markers of diagnostic significance. Previous studies were conducted on samples from different types of salivary gland tumors, while the current study focuses specifically on one type of tumor. To identify potential protein variants, we used the AliceDB database (www.alicedb.ug.edu.pl) developed in our laboratory, which allows for identification based on data from mass spectrometry measurements of canonical protein sequences (UniProt database) as well as isoforms and variants described in the literature.In the present study, we performed a proteomic analysis of saliva samples collected from patients with Warthin tumors (12 samples), patients with Mixed tumors (12 samples) and control samples from healthy individuals (12 samples). An additional aspect of the research that we decided to focus on was the analysis of naturally occurring protein variants in patient samples, as opposed to only canonical protein sequences identified in classical proteomic approaches using databases such as UniProt. For this purpose, we used AliceDB, a bioinformatics tool developed in our research group, enabling the analysis of both canonical protein sequences as well as isoforms, naturally occurring variants and mutations.
DOI: 10.15468/dl.6tnjgd
title: Occurrence Download

description: A dataset containing 288940 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences
FROM
 occurrence
WHERE
 occurrence."year" &gt;= 2019
 AND occurrence."year" &lt;= 2019
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 288940 records were derived from 10817 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043475-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.