cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23624052
title: Transcriptome assembly and functional annotation of three Syngnathidae, <em>Nerophis lumbriciformis</em>, <em>Hippocampus hippocampus</em> and <em>Hippocampus guttulatus.</em>

description: Transcriptomic datasets of " <b>Extensive gene loss parallels kidney </b><b><i>aglomerulism</i></b><b> in Syngnathidae</b> " publication.Nlu_transcriptome.fa.gz - Kidney transcriptome assembly of Nerophis lumbriciformisNlu_proteins.fa.gz - Protein sequences of kidney transcriptome of Nerophis lumbriciformisNlu_mrna.fa.gz - mrna sequences of kidney transcriptome of Nerophis lumbriciformisNlu_genes.fa.gz - Genes sequences of kidney transcriptome of Nerophis lumbriciformisNlu_cds.fa.gz - Cds sequences of kidney transcriptome of Nerophis lumbriciformisNlu_annotation.gff3.gz - Annotation file of kidney transcriptome of Nerophis lumbriciformisHhi_transcriptome.fa.gz - Kidney transcriptome assembly of Hippocampus hippocampusHhi_proteins.fa.gz - Protein sequences of kidney transcriptome of Hippocampus hippocampusHhi_mrna.fa.gz - mrna sequences of kidney transcriptome of Hippocampus hippocampusHhi_genes.fa.gz - Genes sequences of kidney transcriptome of Hippocampus hippocampusHhi_cds.fa.gz - Cds sequences of kidney transcriptome of Hippocampus hippocampusHhi_annotation.gff3.gz - Annotation file of kidney transcriptome of Hippocampus hippocampusHgu_transcriptome.fa.gz - Kidney transcriptome assembly of Hippocampus guttulatusHgu_proteins.fa.gz - Protein sequences of kidney transcriptome of Hippocampus guttulatusHgu_mrna.fa.gz - mrna sequences of kidney transcriptome of Hippocampus guttulatusHgu_genes.fa.gz - Genes sequences of kidney transcriptome of Hippocampus guttulatusHgu_cds.fa.gz - Cds sequences of kidney transcriptome of Hippocampus guttulatusHgu_annotation.gff3.gz - Annotation file of kidney transcriptome of Hippocampus guttulatusHer_transcriptome.fa.gz - Kidney transcriptome assembly of Hippocampus erectusHer_proteins.fa.gz - Protein sequences of kidney transcriptome of Hippocampus erectusHer_mrna.fa.gz - mrna sequences of kidney transcriptome of Hippocampus erectusHer_genes.fa.gz - Genes sequences of kidney transcriptome of Hippocampus erectusHer_cds.fa.gz - Cds sequences of kidney transcriptome of Hippocampus erectusHer_annotation.gff3.gz - Annotation file of kidney transcriptome of Hippocampus erectusHab_transcriptome.fa.gz - Kidney transcriptome assembly of Hippocampus abdominalisHab_proteins.fa.gz - Protein sequences of kidney transcriptome of Hippocampus abdominalisHab_mrna.fa.gz - mrna sequences of kidney transcriptome of Hippocampus abdominalisHab_genes.fa.gz - Genes sequences of kidney transcriptome of Hippocampus abdominalisHab_cds.fa.gz - Cds sequences of kidney transcriptome of Hippocampus abdominalisHab_annotation.gff3.gz - Annotation file of kidney transcriptome of Hippocampus abdominalisGene_Expression_Syngnathidae_References.xlsx - The xlsx book includes all relative gene expression analyses performed for " <b>Extensive gene loss parallels kidney </b><b><i>aglomerulism</i></b><b> in Syngnathidae</b> " publication.
DOI: 10.6084/m9.figshare.23624052.v1
title: Transcriptome assembly and functional annotation of three Syngnathidae, <em>Nerophis lumbriciformis</em>, <em>Hippocampus hippocampus</em> and <em>Hippocampus guttulatus.</em>

description: Transcriptomic datasets of " <b>Extensive gene loss parallels kidney </b><b><i>aglomerulism</i></b><b> in Syngnathidae</b> " publication.Nlu_transcriptome.fa.gz - Kidney transcriptome assembly of Nerophis lumbriciformisNlu_proteins.fa.gz - Protein sequences of kidney transcriptome of Nerophis lumbriciformisNlu_mrna.fa.gz - mrna sequences of kidney transcriptome of Nerophis lumbriciformisNlu_genes.fa.gz - Genes sequences of kidney transcriptome of Nerophis lumbriciformisNlu_cds.fa.gz - Cds sequences of kidney transcriptome of Nerophis lumbriciformisNlu_annotation.gff3.gz - Annotation file of kidney transcriptome of Nerophis lumbriciformisHhi_transcriptome.fa.gz - Kidney transcriptome assembly of Hippocampus hippocampusHhi_proteins.fa.gz - Protein sequences of kidney transcriptome of Hippocampus hippocampusHhi_mrna.fa.gz - mrna sequences of kidney transcriptome of Hippocampus hippocampusHhi_genes.fa.gz - Genes sequences of kidney transcriptome of Hippocampus hippocampusHhi_cds.fa.gz - Cds sequences of kidney transcriptome of Hippocampus hippocampusHhi_annotation.gff3.gz - Annotation file of kidney transcriptome of Hippocampus hippocampusHgu_transcriptome.fa.gz - Kidney transcriptome assembly of Hippocampus guttulatusHgu_proteins.fa.gz - Protein sequences of kidney transcriptome of Hippocampus guttulatusHgu_mrna.fa.gz - mrna sequences of kidney transcriptome of Hippocampus guttulatusHgu_genes.fa.gz - Genes sequences of kidney transcriptome of Hippocampus guttulatusHgu_cds.fa.gz - Cds sequences of kidney transcriptome of Hippocampus guttulatusHgu_annotation.gff3.gz - Annotation file of kidney transcriptome of Hippocampus guttulatusHer_transcriptome.fa.gz - Kidney transcriptome assembly of Hippocampus erectusHer_proteins.fa.gz - Protein sequences of kidney transcriptome of Hippocampus erectusHer_mrna.fa.gz - mrna sequences of kidney transcriptome of Hippocampus erectusHer_genes.fa.gz - Genes sequences of kidney transcriptome of Hippocampus erectusHer_cds.fa.gz - Cds sequences of kidney transcriptome of Hippocampus erectusHer_annotation.gff3.gz - Annotation file of kidney transcriptome of Hippocampus erectusHab_transcriptome.fa.gz - Kidney transcriptome assembly of Hippocampus abdominalisHab_proteins.fa.gz - Protein sequences of kidney transcriptome of Hippocampus abdominalisHab_mrna.fa.gz - mrna sequences of kidney transcriptome of Hippocampus abdominalisHab_genes.fa.gz - Genes sequences of kidney transcriptome of Hippocampus abdominalisHab_cds.fa.gz - Cds sequences of kidney transcriptome of Hippocampus abdominalisHab_annotation.gff3.gz - Annotation file of kidney transcriptome of Hippocampus abdominalisGene_Expression_Syngnathidae_References.xlsx - The xlsx book includes all relative gene expression analyses performed for " <b>Extensive gene loss parallels kidney </b><b><i>aglomerulism</i></b><b> in Syngnathidae</b> " publication.
DOI: 10.5281/zenodo.8348386
title: Interviews Questionnaire Pilot Islands

description: Anonymized data set from questionnaires and interviews carried out in the three pilot islands in REACT project.
DOI: 10.5281/zenodo.8348385
title: Interviews Questionnaire Pilot Islands

description: Anonymized data set from questionnaires and interviews carried out in the three pilot islands in REACT project.
DOI: 10.6084/m9.figshare.24146556
title: cinema-ot example dataset

description: Example dataset for CINEMA-OT. Obtained from https://github.com/vandijklab/CINEMA-OT
DOI: 10.25625/fslmyu/pkxnid
title: data_b0_gre.cfl

description: :unav
DOI: 10.25625/fslmyu/pvfimq
title: data_b1_precond.cfl

description: :unav
DOI: 10.25625/fslmyu/pcsqf7
title: data_irflash.hdr

description: :unav
DOI: 10.25625/fslmyu/gjuual
title: data_irbssfp.hdr

description: :unav
DOI: 10.25625/fslmyu/hjaueb
title: data_b1_precond.hdr

description: :unav
DOI: 10.25625/fslmyu/fakdm0
title: data_GSM_t1.hdr

description: :unav
DOI: 10.25625/fslmyu/oyszkw
title: data_GSM_t2.cfl

description: :unav
DOI: 10.25625/fslmyu/azdp8v
title: data_irbssfp.cfl

description: :unav
DOI: 10.25625/fslmyu/rrpeyy
title: data_irflash.cfl

description: :unav
DOI: 10.25625/fslmyu/jq11yi
title: data_GSM_t2.hdr

description: :unav
DOI: 10.25625/fslmyu/twfnmd
title: data_GSM_t1.cfl

description: :unav
DOI: 10.25625/fslmyu
title: Quantitative Magnetic Resonance Imaging of the NIST Phantom

description: Magnetic resonance imaging dataset of the T1 layer of the NIST Phantom Model 106 (https://doi.org/10.1002/mrm.28779) acquired with inversion-recovery balanced steady-state free-precession (IR-bSSFP), inversion-recovery fast low angle shot (IR-FLASH) sequences, inversion-recovery single-echo spin echo, single-echo spin echo, gradient echo and FLASH-based B1 mapping sequence with preconditioning RF pulse. The files are intended to be used with the Berkeley Advanced Reconstruction Toolbox (https://doi.org/10.5281/zenodo.592960). Each dataset consists of a ASCII Text-encoded header (.hdr) and a binary-encoded complex float file (.cfl).
DOI: 10.25625/fslmyu/slsyxy
title: data_b0_gre.hdr

description: :unav
DOI: 10.5281/zenodo.6957357
title: Biomass characterization

description: Physicochemical features of the selected biomass wastes in the GICO project (https://www.gicoproject.eu/): Proximate, ultimate analyses, S and Cl contents and calorific value
DOI: 10.5281/zenodo.6957358
title: Biomass characterization

description: Physicochemical features of the selected biomass wastes in the GICO project (https://www.gicoproject.eu/): Proximate, ultimate analyses, S and Cl contents and calorific value
DOI: 10.5281/zenodo.8348413
title: REACT Dataset follower island questionnaire

description: Date set from the questionnaires filled in by follower islands residents.
DOI: 10.5281/zenodo.8348412
title: REACT Dataset follower island questionnaire

description: Date set from the questionnaires filled in by follower islands residents.
DOI: 10.57967/hf/1116
title: AjwaOrMedjool
DOI: 10.57745/30ps7a
title: Reading NetCDF.R

description: :unav
DOI: 10.57745/ejcsli
title: Retrospective_simulation_Q.zip

description: :unav
DOI: 10.57745/ifhq2h
title: shape file.zip

description: :unav
DOI: 10.57745/jeyzsj
title: Retrospective_simulation_Tw.zip

description: :unav
DOI: 10.57745/vo0ojz
title: Readme.txt

description: :unav
DOI: 10.57745/0nwcr3
title: Projections_Tw_CNRM-CM5-LR_ALADIN63_rcp26_2006_2100.zip

description: :unav
DOI: 10.57745/6k7fs0
title: Projections_Tw_CNRM-CM5-LR_ALADIN63_historical_1976_2005.zip

description: :unav
DOI: 10.6084/m9.figshare.16559613
title: Supplementary Material for: Copy Number Variation Analysis increases the number of Candidate Loci associated with Pediatric Obesity

description: Medicine
DOI: 10.6084/m9.figshare.16559613.v1
title: Supplementary Material for: Copy Number Variation Analysis increases the number of Candidate Loci associated with Pediatric Obesity

description: Medicine
DOI: 10.5281/zenodo.5386318
title: Linac Simulation

description: Linac is a smart environment simulator. The files and datasets refer to a simulation performed using the tool. The simulation consists of replicating the activities recorded in the CASAS datasets. Linac is available at http://linac.compute.dtu.dk/
DOI: 10.5281/zenodo.5386317
title: Linac Simulation

description: Linac is a smart environment simulator. The files and datasets refer to a simulation performed using the tool. The simulation consists of replicating the activities recorded in the CASAS datasets. Linac is available at http://linac.compute.dtu.dk/
DOI: 10.5281/zenodo.5384551
title: Automating Code Review Activities 2.0 (datasets and models)

description: Resources related by the research work <em>"Automating Code Review Activities 2.0".</em> <strong>dataset.zip </strong>contains all the preprocessed datasets used in our work; <strong>models.zip</strong> contains the (best) checkpoints of the fine-tuned T5 models; <strong>tokenizer.zip</strong> contains the Sentencepiece model and vocabulary trained on our pre-training dataset; <strong>automating_code_review.zip</strong> contains the material to successfully run our Colab notebooks. More information in the replication package of our work: code_review_autmoation
DOI: 10.5281/zenodo.5384550
title: Automating Code Review Activities 2.0 (datasets and models)

description: Resources related by the research work <em>"Automating Code Review Activities 2.0".</em> <strong>dataset.zip </strong>contains all the preprocessed datasets used in our work; <strong>models.zip</strong> contains the (best) checkpoints of the fine-tuned T5 models; <strong>tokenizer.zip</strong> contains the Sentencepiece model and vocabulary trained on our pre-training dataset; <strong>automating_code_review.zip</strong> contains the material to successfully run our Colab notebooks. More information in the replication package of our work: code_review_autmoation
DOI: 10.5281/zenodo.5386138
title: Dataset related to article "Robot-assisted rehabilitation of hand function after stroke: Development of prediction models for reference to therapy"

description: DATASET #1 Il data set è composto da 174 osservazioni riferite ad un campione di n=174 pazienti. Le variabili prese in considerazione per lo studio del data set sono 21: ID_Pazient: variabile quantitativa continua, indica il numero di identificazione del paziente Sex: variabile dicotomica, indica il sesso del paziente (Maschio=0, Femmina=1) Age: variabile quantitativa continua, indica l'età del paziente nel momento in cui è stata effettuata la valutazione EMG_Control: variabile dicotomica, indica la capacità (Si=1) o meno (No=0) del soggetto di controllare il dispositivo con i propri segnali elettromiografici Force_Control: variabile dicotomica, indica la capacità (Si=1) o meno (No=0) del paziente di controllare il dispositivo con la propria forza Month_Injury: variabile quantitativa continua, indica i mesi trascorsi dalla data in cui è avvenuto l'ictus Diagnosis: variabile dicotomica, indica la tipologia di ictus: (Ischemico=0, Emorragico =1) Hemisphere: variabile dicotomica, indica quale emisfero cerebrale è stato colpito dall'ictus (Destro=0, Sinistro=1) FM_UE: variabile quantitativa discreta, indica la misura della funzione motoria dell'arto superiore determinata somministrando la scala Fugl-Meyer Upper Extremity Sensitivity: variabile quantitativa discreta, indica la sezione per la misura della sensibilità della scala Fugl-Meyer Pain_ROM: variabile quantitativa discreta, indica la sezione per la misura di articolarità e dolore della scala Fugl-Meyer FIM: variabile quantitativa discreta, indica la misura di autonomia della persona nelle attività della vita quotidiana, determinata dalla somministrazione della scala Functional Independence Measure RPS: variabile quantitativa discreta, indica la misura della funzione di raggiungimento di un oggetto Peg_Sec: variabile quantitativa continua, indica la misura della destrezza manuale fine e coincide con il rapporto tra il numero di pioli e i secondi impiegati per inserirli in uno specifico supporto PectMaj: variabile qualitativa ordinata, indica la misura della spasticità del pettorale, secondo la Modified Ashworth Scale BicBrach: variabile qualitativa ordinata, indica la misura della spasticità del bicipite, secondo la Modified Ashworth Scale FlexCarp: variabile qualitativa ordinata, indica la misura della spasticità del flessore del carpo, secondo la Modified Ashworth Scale FlexProfDig: variabile qualitativa ordinata, indica la misura della spasticità del flessore profondo delle dita, secondo la Modified Ashworth Scale FlexSupDig: variabile qualitativa ordinata, indica la misura della spasticità del flessore superficiale delle dita, secondo la Modified Ashworth Scale Ashworth_TOT: variabile quantitativa discreta, indica la misura totale della Modified Ashworth Scale, data dalla somma delle 5 variabili precedenti BB_par: variabile quantitativa discreta, indica la misura della destrezza manuale grossolana dell'arto paretico
DOI: 10.5281/zenodo.5386137
title: Dataset related to article "Robot-assisted rehabilitation of hand function after stroke: Development of prediction models for reference to therapy"

description: DATASET #1 Il data set è composto da 174 osservazioni riferite ad un campione di n=174 pazienti. Le variabili prese in considerazione per lo studio del data set sono 21: ID_Pazient: variabile quantitativa continua, indica il numero di identificazione del paziente Sex: variabile dicotomica, indica il sesso del paziente (Maschio=0, Femmina=1) Age: variabile quantitativa continua, indica l'età del paziente nel momento in cui è stata effettuata la valutazione EMG_Control: variabile dicotomica, indica la capacità (Si=1) o meno (No=0) del soggetto di controllare il dispositivo con i propri segnali elettromiografici Force_Control: variabile dicotomica, indica la capacità (Si=1) o meno (No=0) del paziente di controllare il dispositivo con la propria forza Month_Injury: variabile quantitativa continua, indica i mesi trascorsi dalla data in cui è avvenuto l'ictus Diagnosis: variabile dicotomica, indica la tipologia di ictus: (Ischemico=0, Emorragico =1) Hemisphere: variabile dicotomica, indica quale emisfero cerebrale è stato colpito dall'ictus (Destro=0, Sinistro=1) FM_UE: variabile quantitativa discreta, indica la misura della funzione motoria dell'arto superiore determinata somministrando la scala Fugl-Meyer Upper Extremity Sensitivity: variabile quantitativa discreta, indica la sezione per la misura della sensibilità della scala Fugl-Meyer Pain_ROM: variabile quantitativa discreta, indica la sezione per la misura di articolarità e dolore della scala Fugl-Meyer FIM: variabile quantitativa discreta, indica la misura di autonomia della persona nelle attività della vita quotidiana, determinata dalla somministrazione della scala Functional Independence Measure RPS: variabile quantitativa discreta, indica la misura della funzione di raggiungimento di un oggetto Peg_Sec: variabile quantitativa continua, indica la misura della destrezza manuale fine e coincide con il rapporto tra il numero di pioli e i secondi impiegati per inserirli in uno specifico supporto PectMaj: variabile qualitativa ordinata, indica la misura della spasticità del pettorale, secondo la Modified Ashworth Scale BicBrach: variabile qualitativa ordinata, indica la misura della spasticità del bicipite, secondo la Modified Ashworth Scale FlexCarp: variabile qualitativa ordinata, indica la misura della spasticità del flessore del carpo, secondo la Modified Ashworth Scale FlexProfDig: variabile qualitativa ordinata, indica la misura della spasticità del flessore profondo delle dita, secondo la Modified Ashworth Scale FlexSupDig: variabile qualitativa ordinata, indica la misura della spasticità del flessore superficiale delle dita, secondo la Modified Ashworth Scale Ashworth_TOT: variabile quantitativa discreta, indica la misura totale della Modified Ashworth Scale, data dalla somma delle 5 variabili precedenti BB_par: variabile quantitativa discreta, indica la misura della destrezza manuale grossolana dell'arto paretico
DOI: 10.6084/m9.figshare.16559643
title: Supplementary Material for: Copy Number Variation Analysis increases the number of Candidate Loci associated with Pediatric Obesity

description: Medicine
DOI: 10.6084/m9.figshare.16559643.v1
title: Supplementary Material for: Copy Number Variation Analysis increases the number of Candidate Loci associated with Pediatric Obesity

description: Medicine
DOI: 10.6084/m9.figshare.16559517.v1
title: DDS-Tox isotope distributions

description: File containing isotopic distribution from the entries in DDS-Tox database. The distribution are obtained by combining the results from the fine and coarse isotopic distribution calculator from pyOpenMS v2.6.0.
DOI: 10.5066/p9y9o1yj
title: Data for multiple linear regression models for estimating Escherichia coli (E. coli) concentrations or the probability of exceeding the bathing-water standard at recreational sites in Ohio and Pennsylvania as part of the Great Lakes NowCast, 2019

description: Site-specific multiple linear regression models were developed for one beach in Ohio (three discrete sampling sites) and one beach in Pennsylvania to estimate concentrations of Escherichia coli (E. coli) or the probability of exceeding the bathing-water standard for E. coli in recreational waters used by the public. Traditional culture-based methods are commonly used to estimate concentrations of fecal indicator bacteria, such as E. coli; however, results are obtained 18 to 24 hours post sampling and do not accurately reflect current water-quality conditions. Beach-specific mathematical models use environmental and water-quality variables that are easily and quickly measured as surrogates to estimate concentrations of fecal-indicator bacteria or to provide the probability that a State recreational water-quality standard will be exceeded. When predictive models are used for beach closure or advisory decisions, they are referred to as "nowcasts". Software designed for model development by the U.S. Environmental Protection Agency (Virtual Beach) was used. The selected model for each beach was based on a combination of explanatory variables including, most commonly, turbidity, water temperature, change in lake level over 24 hours, and antecedent rainfall. Model results are used by managers to report water-quality conditions to the public through the Great Lakes NowCast in 2019 (https://pa.water.usgs.gov/apps/nowcast/). Model performance in 2019 (sensitivity, specificity, and accuracy) was compared to using the previous day's E. coli concentration (persistence method).
DOI: 10.6073/pasta/924fc3d2806391fd5b0124f98c584414
title: Ecological Survey of Central Arizona: a survey of key ecological indicators in parcels of residential areas in the greater Phoenix metropolitan area, ongoing since 2010 (Reformatted to the ecocomDP Design Pattern)

description: This data package is formatted as an ecocomDP (Ecological Community Data Pattern). For more information on ecocomDP see https://github.com/EDIorg/ecocomDP. This Level 1 data package was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-cap/653/2. The abstract below was extracted from the Level 0 data package and is included for context: The Ecological Survey of Central Arizona (ESCA) is an extensive field survey and integrated inventory designed to capture key ecological indicators of the CAP LTER study area consisting of the urbanized, suburbanized, and agricultural areas of metropolitan Phoenix, and the surrounding Sonoran desert. The survey is conducted every five years at approximately 200 sample plots (30m x 30m) that were located randomly using a tessellation-stratified dual-density sampling design. Study plots cover habitats throughout the CAP LTER study area ranging from native Sonoran desert sites to residential yards to an airport tarmac. In 2010, the survey was expanded to include an assessment of residential parcels overlapping the survey plot at sites in residential areas. Many of the same variables that are measured in the 30m x 30m survey plot are measured in the parcel, including an inventory of perennial plants, and the biovolume of trees. In addition, a detailed assessment of characteristics of the parcel is performed. Investigators interested in data from the broader Ecological Survey of Central Arizona that includes all survey plots should should search the data catalog for 'ecological survey of central arizona' or 'survey 200' to locate those and other data related to the CAP LTER's ESCA.
DOI: 10.25345/c5vv8x
title: MassIVE MSV000088046 - Metabolic profiling of Cupriavidus necator B-4383 under iron limitation
title: An iron limitation experiment, in biological duplicate, with the strain grown in the same medium either supplemented with or deficient in iron. An additional file included is the crude extract of a large scale preparation for compound isolation under iron limited conditions. A no injection blank is included with each set of samples.