cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17028/rd.lboro.25160099
title: Supplementary information files for Impact of unhealthy food and beverage consumption on children’s risk of dental caries: a systematic review

description: © the Authors, CC-BY 4.0Supplementary files for article Impact of unhealthy food and beverage consumption on children’s risk of dental caries: a systematic reviewContext The impact of unhealthy foods and beverages, namely those high in sugar, salt, and saturated or trans fats, has been studied extensively in relation to weight, body composition, and noncommunicable diseases, but less so in relation to the risk of dental caries. Few previous reviews have examined the evidence from all countries globally. ObjectiveA systematic review was conducted to assess the impact of unhealthy food and beverage consumption on the risk of dental caries in children aged ≤10 years, commissioned by the World Health Organization to inform updated complementary feeding recommendations. Data Sources Systematic searches were conducted in the PubMed, Cochrane, and Embase databases for articles meeting the inclusion criteria dating from January 1971 to March 2022; supplementary searches were undertaken for articles from that period to June 2022. Data Extraction Unhealthy foods and beverages were identified using nutrient- and food-based approaches. Risk of bias was assessed using the Risk Of Bias In Non-randomized Studies of Interventions (ROBINS-I). Data Analysis A total of 30 023 unique citations were screened, yielding 37 studies for inclusion. Studies were conducted in high-income (n = 23 [62.2%]) or middle-income countries (n = 14 [37.8%]). Evidence synthesis was performed narratively, stratified by age (0 years to &lt;2 years, 2 years to &lt;5 years, and 5 years to ≤10 years) and exposure (unhealthy foods and unhealthy beverages). The heterogeneity of the exposures and comparators across studies was high. Almost all studies (n = 34) reported positive associations between the consumption of sugar-sweetened beverages or foods high in free sugars and dental caries. However, 67.6% of studies were assessed as having serious risk of bias. Conclusion The evidence indicates that the consumption of unhealthy food and beverages in children ≤10 years appears to increase the risk of dental caries. Further longitudinal studies with high-quality dietary assessments, including studies in low-income countries and children aged &gt;5 years at baseline, are recommended in order to build a more robust evidence base for use in the development of policy recommendations.
DOI: 10.6084/m9.figshare.14740690
title: The genetic feature and virulence determinant of highly virulent community-associated MRSA ST338-SCCmec Vb in China

description: ST59 is the predominant pathotype of community-associated methicillin-resistant <i>Staphylococcus aureus</i> (CA-MRSA) in China. As a variant of ST59, there is relatively little known about the detailed information of ST338. To address this issue, here, we described thirteen ST338 CA-MRSA strains isolated from severe bloodstream infection cases, and focused on their epidemiology, genetic features and virulence potential. Phylogenetic analysis showed the earliest isolated strain of this study is likely a predecessor of recent ST338 lineage (after year of 2014). Furthermore, the phylogenetic reconstruction and time estimation suggested that ST338 evolved from ST59 in 1991. Notably, the carrying patten of virulence factors of all ST338 strains were similar, and the genomic islands νSaα, νSaγ and SaPI and the core virulence factors like <i>hla</i> and <i>psm</i> were detected in ST338 isolates. However, all ST338 isolates lacked some adhesion factors such as <i>clfA</i>, <i>clfB</i>, <i>eap</i>, <i>cna</i> and <i>icaD</i>. Additionally, among these ST338 strains, one PVL-negative ST338 isolate was detected. Experiment on mice nose and human alveolar epithelial cell showed that the nasal colonization ability of ST338 was weaker than that of CA-MRSA MW2. In a mouse bloodstream infection model and skin infection model, PVL+ and PVL− strains had the similar virulence, which was dependent on upregulation of toxin genes rather than the presence of mobile genetic elements such as ΦSa2 carrying PVL. Our findings provide important insight into the epidemiology and pathogenicity of the novel and highly virulent ST338-SCC<i>mec</i> Vb clone.
DOI: 10.6084/m9.figshare.22604974
title: Additional file 2 of GhAAO2 was observed responding to NaHCO3 stress in cotton compared to AAO family genes

description: Additional file 2 .
DOI: 10.6084/m9.figshare.22604920.v1
title: Additional file 3 of Molecular and physiological mechanisms of tea (Camellia sinensis (L.) O. Kuntze) leaf and root in response to nitrogen deficiency

description: Additional file 3: Table S3. Down-regulated DEGs in response to N deficiency in tea roots.
DOI: 10.6084/m9.figshare.22604932.v1
title: Additional file 7 of Molecular and physiological mechanisms of tea (Camellia sinensis (L.) O. Kuntze) leaf and root in response to nitrogen deficiency

description: Additional file 7: Table S7. DEGs involved in N metabolism in tea leaves under N deficiency.
DOI: 10.6084/m9.figshare.23650169.v1
title: Additional file 3 of Astrocyte-derived SerpinA3N promotes neuroinflammation and epileptic seizures by activating the NF-κB signaling pathway in mice with temporal lobe epilepsy

description: Additional file 3: Table S2. Differential expression proteins of hippocampus in temporal lobe epilepsy mice.
DOI: 10.6084/m9.figshare.12643683
title: Additional file 13 of Small nucleolar RNAs signature (SNORS) identified clinical outcome and prognosis of bladder cancer (BLCA)

description: Additional file 13: Table S11. Summary of GO analyses for candidate snoRNAs relevant mRNAs in TCGA-BLCA cohort PPI network of candidate snoRNAs relevant AS mRNAs.
DOI: 10.6084/m9.figshare.12643692.v1
title: Additional file 16 of Small nucleolar RNAs signature (SNORS) identified clinical outcome and prognosis of bladder cancer (BLCA)

description: Additional file 16: Table S14. The output of PPI network for candidate snoRNAs relevant AS mRNAs in TCGA-BLCA cohortSpearman correlation analysis for candidate snoRNAs and relevant signature with Hallmark gene-set in TCGA-BLCA cohorts.
DOI: 10.6084/m9.figshare.12643695
title: Additional file 17 of Small nucleolar RNAs signature (SNORS) identified clinical outcome and prognosis of bladder cancer (BLCA)

description: Additional file 17: Table S15. Summary of GO analysis for candidate snoRNAs relevant AS mRNAs in TCGA-BLCA cohort .
DOI: 10.6084/m9.figshare.12643695.v1
title: Additional file 17 of Small nucleolar RNAs signature (SNORS) identified clinical outcome and prognosis of bladder cancer (BLCA)

description: Additional file 17: Table S15. Summary of GO analysis for candidate snoRNAs relevant AS mRNAs in TCGA-BLCA cohort .
DOI: 10.6084/m9.figshare.23650175
title: Additional file 5 of Astrocyte-derived SerpinA3N promotes neuroinflammation and epileptic seizures by activating the NF-κB signaling pathway in mice with temporal lobe epilepsy

description: Additional file 5: Table S4. Primer sequences used for qPCR.
DOI: 10.6084/m9.figshare.22605094.v1
title: Additional file 3 of Single-cell transcriptome analysis reveals stem cell-like subsets in the progression of Waldenström’s macroglobulinemia

description: Additional file 3. Differentially expressed genes of mature B cells.
DOI: 10.6084/m9.figshare.22605103.v1
title: Additional file 6 of Single-cell transcriptome analysis reveals stem cell-like subsets in the progression of Waldenström’s macroglobulinemia

description: Additional file 6. Differentially expressed genes of CD3+CD19+ cells between WM and IgM MGUS patients.
DOI: 10.6084/m9.figshare.22605097.v1
title: Additional file 4 of Single-cell transcriptome analysis reveals stem cell-like subsets in the progression of Waldenström’s macroglobulinemia

description: Additional file 4. Differentially expressed genes of plasma cells.
DOI: 10.6084/m9.figshare.22605100
title: Additional file 5 of Single-cell transcriptome analysis reveals stem cell-like subsets in the progression of Waldenström’s macroglobulinemia

description: Additional file 5: Table S3. Percentage of CD3+CD19+ cells in 8 WM samples.
DOI: 10.6084/m9.figshare.22605106
title: Additional file 7 of Single-cell transcriptome analysis reveals stem cell-like subsets in the progression of Waldenström’s macroglobulinemia

description: Additional file 7: Table S5. Mutation in the 6 WM patients
DOI: 10.6084/m9.figshare.22605100.v1
title: Additional file 5 of Single-cell transcriptome analysis reveals stem cell-like subsets in the progression of Waldenström’s macroglobulinemia

description: Additional file 5: Table S3. Percentage of CD3+CD19+ cells in 8 WM samples.
DOI: 10.6084/m9.figshare.22605103
title: Additional file 6 of Single-cell transcriptome analysis reveals stem cell-like subsets in the progression of Waldenström’s macroglobulinemia

description: Additional file 6. Differentially expressed genes of CD3+CD19+ cells between WM and IgM MGUS patients.
DOI: 10.6084/m9.figshare.22605094
title: Additional file 3 of Single-cell transcriptome analysis reveals stem cell-like subsets in the progression of Waldenström’s macroglobulinemia

description: Additional file 3. Differentially expressed genes of mature B cells.
DOI: 10.6084/m9.figshare.11598621
title: MOESM1 of Genome-wide systematic characterization of the HAK/KUP/KT gene family and its expression profile during plant growth and in response to low-K+ stress in Saccharum

description: Additional file 1. The HAK gene alleles in Saccharum spontaneum.
DOI: 10.6084/m9.figshare.11598621.v1
title: MOESM1 of Genome-wide systematic characterization of the HAK/KUP/KT gene family and its expression profile during plant growth and in response to low-K+ stress in Saccharum

description: Additional file 1. The HAK gene alleles in Saccharum spontaneum.
DOI: 10.24403/jp.1333642
title: Carex strigosa HUDS. - ein erster Nachweis für die Flora Thüringens / Rainer Mast und Helge Bruelheide
DOI: 10.24403/jp.1333644
title: Bemerkungen zum Vorkommen der Gras-Platterbse (Lathyrus nissolia L.) in Thüringen / Wolfgang Heinrich
DOI: 10.6084/m9.figshare.11598633
title: MOESM2 of Genome-wide systematic characterization of the HAK/KUP/KT gene family and its expression profile during plant growth and in response to low-K+ stress in Saccharum

description: Additional file 2. Similarity between HAK proteins in sugarcane calculated by NCBI BLASTP.
DOI: 10.6084/m9.figshare.11598633.v1
title: MOESM2 of Genome-wide systematic characterization of the HAK/KUP/KT gene family and its expression profile during plant growth and in response to low-K+ stress in Saccharum

description: Additional file 2. Similarity between HAK proteins in sugarcane calculated by NCBI BLASTP.
DOI: 10.6084/m9.figshare.11598648
title: MOESM4 of Genome-wide systematic characterization of the HAK/KUP/KT gene family and its expression profile during plant growth and in response to low-K+ stress in Saccharum

description: Additional file 4. Amino acid sequence of 279 HAK/KUP/KT transporters from 15 representative plant species.
DOI: 10.6084/m9.figshare.11598648.v1
title: MOESM4 of Genome-wide systematic characterization of the HAK/KUP/KT gene family and its expression profile during plant growth and in response to low-K+ stress in Saccharum

description: Additional file 4. Amino acid sequence of 279 HAK/KUP/KT transporters from 15 representative plant species.
DOI: 10.5258/soton/d2930
title: Dataset supporting the University of Southampton Doctoral Thesis "Navigating tensions in children's safeguarding"

description: Dataset supporting the University of Southampton Doctoral Thesis "Navigating tensions in children’s safeguarding"

The dataset includes qualitative data consisting of interview and audio diary transcripts. Participants are senior managers involved with children's safeguarding and delivery-level practitioners involved with children's safeguarding processes.

Data is available only 'on request' to bone fide researchers with ethical approval. Please complete the attached request form and return it to researchdata@soton.ac.uk
DOI: 10.6084/m9.figshare.22605106.v1
title: Additional file 7 of Single-cell transcriptome analysis reveals stem cell-like subsets in the progression of Waldenström’s macroglobulinemia

description: Additional file 7: Table S5. Mutation in the 6 WM patients
DOI: 10.18112/openneuro.ds004630.v1.0.0
title: SpiDa-MRI neuroimaging dataset
DOI: 10.6084/m9.figshare.11598678
title: MOESM7 of Genome-wide systematic characterization of the HAK/KUP/KT gene family and its expression profile during plant growth and in response to low-K+ stress in Saccharum

description: Additional file 7. Statistics of exon number in each HAK.
DOI: 10.6084/m9.figshare.11598678.v1
title: MOESM7 of Genome-wide systematic characterization of the HAK/KUP/KT gene family and its expression profile during plant growth and in response to low-K+ stress in Saccharum

description: Additional file 7. Statistics of exon number in each HAK.
DOI: 10.6084/m9.figshare.11598735
title: MOESM1 of Nutrient-wide association study of 92 foods and nutrients and breast cancer risk

description: Additional file 1: Means and standard deviations. Mean intake and standard deviation of the 92 foods and nutrients that were evaluated in the EPIC study.
DOI: 10.6084/m9.figshare.11598735.v1
title: MOESM1 of Nutrient-wide association study of 92 foods and nutrients and breast cancer risk

description: Additional file 1: Means and standard deviations. Mean intake and standard deviation of the 92 foods and nutrients that were evaluated in the EPIC study.
DOI: 10.6084/m9.figshare.11598756
title: MOESM2 of Nutrient-wide association study of 92 foods and nutrients and breast cancer risk

description: Additional file 2: Model estimates. Estimates from the models for the 92 dietary factors that were evaluated in the EPIC study.
DOI: 10.6084/m9.figshare.11598756.v1
title: MOESM2 of Nutrient-wide association study of 92 foods and nutrients and breast cancer risk

description: Additional file 2: Model estimates. Estimates from the models for the 92 dietary factors that were evaluated in the EPIC study.
DOI: 10.24403/jp.1333646
title: Axt, J. C.: Florula Arnstadtiensis. Die älteste Flora von Arnstadt. - Arnstadt : Thüringer Chronik- Verlag, 1995 / [rezensiert von] H. Manitz
DOI: 10.6084/m9.figshare.6880190.v1
title: MOESM1 of Comparison of iTRAQ and SWATH in a clinical study with multiple time points

description: Additional File 1. List of all analyzed proteins and the number of peptides used for relative quantitation of each protein.
DOI: 10.6084/m9.figshare.25164080
title: Hydrothermal conditions modulate the impact of climate extremes on vegetation growth in the Northern Hemisphere

description: <b>Aim</b>Climate extremes are becoming more frequent under global warming, with substantial repercussions for vegetation growth. The degree to which climate extremes increase the risk of high-impact events on vegetation growth is of high concern.<b>Location</b>Northern Hemisphere (north of 30° N).<b>Time Period</b>From 2001 to 2022<b>Major Taxa Studied</b>Vegetation(including croplands, boreal, temperate forests, and temperate grasslands).<b>Methods</b>We utilized solar-induced chlorophyll fluorescence (SIF) and the normalized difference vegetation index (NDVI) as proxies for vegetation growth and performed event coincidence and sensitivity analyses to attribute satellite-derived vegetation growth extremes to diverse climate extremes (extreme heat, cold, wet, and drought) in the Northern Hemisphere.<b>Results</b>Our results showed that extreme heat and cold were the main climatic extremes that induced positive and negative vegetation growth extremes north of 30° N, respectively, mainly in cold and humid ecosystems (boreal and temperate forests). Water-related extreme events accounted for less than one-third of vegetation extremes. The contribution of drought to positive vegetation growth extreme events (approximately 17 %), mainly in cold and humid ecosystems, was even slightly higher than that of extreme wet (approximately 12 %), which predominantly impacted relatively warm and arid ecosystems (croplands and temperate grasslands). We further identified potential climatic thresholds that could induce a reversal of vegetation growth responses to climate extremes and showed that the past four decades of warming and precipitation changes did not induce a shift in the main climatic drivers of vegetation extremes across northern ecosystems.<b>Main Conclusions</b>Our results emphasize the crucial role of background hydrothermal conditions in the attribution of vegetation growth extremes to diverse climate extremes across northern ecosystems and have substantial implications for predicting how Northern Hemisphere vegetation will respond to increasing climate extremes in the future.
DOI: 10.6084/m9.figshare.25164080.v1
title: Hydrothermal conditions modulate the impact of climate extremes on vegetation growth in the Northern Hemisphere

description: <b>Aim</b>Climate extremes are becoming more frequent under global warming, with substantial repercussions for vegetation growth. The degree to which climate extremes increase the risk of high-impact events on vegetation growth is of high concern.<b>Location</b>Northern Hemisphere (north of 30° N).<b>Time Period</b>From 2001 to 2022<b>Major Taxa Studied</b>Vegetation(including croplands, boreal, temperate forests, and temperate grasslands).<b>Methods</b>We utilized solar-induced chlorophyll fluorescence (SIF) and the normalized difference vegetation index (NDVI) as proxies for vegetation growth and performed event coincidence and sensitivity analyses to attribute satellite-derived vegetation growth extremes to diverse climate extremes (extreme heat, cold, wet, and drought) in the Northern Hemisphere.<b>Results</b>Our results showed that extreme heat and cold were the main climatic extremes that induced positive and negative vegetation growth extremes north of 30° N, respectively, mainly in cold and humid ecosystems (boreal and temperate forests). Water-related extreme events accounted for less than one-third of vegetation extremes. The contribution of drought to positive vegetation growth extreme events (approximately 17 %), mainly in cold and humid ecosystems, was even slightly higher than that of extreme wet (approximately 12 %), which predominantly impacted relatively warm and arid ecosystems (croplands and temperate grasslands). We further identified potential climatic thresholds that could induce a reversal of vegetation growth responses to climate extremes and showed that the past four decades of warming and precipitation changes did not induce a shift in the main climatic drivers of vegetation extremes across northern ecosystems.<b>Main Conclusions</b>Our results emphasize the crucial role of background hydrothermal conditions in the attribution of vegetation growth extremes to diverse climate extremes across northern ecosystems and have substantial implications for predicting how Northern Hemisphere vegetation will respond to increasing climate extremes in the future.
DOI: 10.24403/jp.1336183
title: Böhm, W.: Biographisches Handbuch zur Geschichte des Pflanzenbaus. - München : KG Saur Verlag, 1997 / [rezensiert von] U. Hossfeld
DOI: 10.24403/jp.1336267
title: Dörfelt, H. & Heklau, H.: Die Geschichte der Mykologie. - Schwäbisch Gmünd : Einhorn-Verlag Eduard Dietenberger GmbH, 1998 / [rezensiert von] V. Wissemann
DOI: 10.6084/m9.figshare.22605071.v1
title: Additional file 1 of Icariin-conditioned serum combined with chitosan attenuates cartilage injury in rabbit knees with osteochondral defect

description: Additional file 1: Raw data of all figures.
DOI: 10.24403/jp.1333664
title: Beiträge zur Waidtagung. Jahrgang 6. - Erfurt, 1994 / [rezensiert von] H. Manitz
DOI: 10.6084/m9.figshare.12643680.v1
title: Additional file 12 of Small nucleolar RNAs signature (SNORS) identified clinical outcome and prognosis of bladder cancer (BLCA)

description: Additional file 12: Table S10. The output of PPI network for candidate snoRNAs relevant mRNAs in TCGA-BLCA cohort.
DOI: 10.24403/jp.1336268
title: Düll, R.: Exkursionstaschenbuch der Moose. -5. Aufl. - Bad Münstereifel : IDH-Verlag für Bryologie und Ökologie, 1997 / [rezensiert von] H.-J. Zündorf
DOI: 10.6084/m9.figshare.12643686
title: Additional file 14 of Small nucleolar RNAs signature (SNORS) identified clinical outcome and prognosis of bladder cancer (BLCA)

description: Additional file 14: Table S12. Summary of KEGG analyses for candidate snoRNAs relevant mRNAs in TCGA-BLCA cohort.
DOI: 10.6084/m9.figshare.12643698
title: Additional file 18 of Small nucleolar RNAs signature (SNORS) identified clinical outcome and prognosis of bladder cancer (BLCA)

description: Additional file 18: Table S16. Summary of KEGG analysis for candidate snoRNAs relevant AS mRNAs in TCGA-BLCA cohort.
DOI: 10.6084/m9.figshare.12643698.v1
title: Additional file 18 of Small nucleolar RNAs signature (SNORS) identified clinical outcome and prognosis of bladder cancer (BLCA)

description: Additional file 18: Table S16. Summary of KEGG analysis for candidate snoRNAs relevant AS mRNAs in TCGA-BLCA cohort.
DOI: 10.6084/m9.figshare.7404881
title: Additional file 1: of Oral lichen-planus-associated fibroblasts acquire myofibroblast characteristics and secrete pro-inflammatory cytokines in response to Porphyromonas gingivalis lipopolysaccharide stimulation

description: The detected concentrations of IL1-α, IL1-β, IL-2, IL-4, IL-6, IL-8, IL-10 IFN-γ and TNF-α from AF- and NF-conditioned media at the 0, 2, 4, 6, 8, 12, 24, and 48 h time points. (CSV 15 kb)
DOI: 10.6084/m9.figshare.25163666
title: Osseointegrative and antimicrobial properties of graphene oxide nano coated dental implants: A systematic review

description: Osseointegration stands as a pivotal concept within the realm of dental implants, signifying the intricate process through which a dental implant integrates with the adjoining bone tissue. Graphene oxide (GO) has been shown to promote osseointegration, the process by which the implant fuses with the surrounding bone. The objective of this study was to assess the osseointegrative and antimicrobial properties of GO nano coated dental implants. A systematic search was conducted using electronic databases (e.g., PubMed, Scopus, Web of Science) to identify relevant studies published. Inclusion criteria encompassed studies that evaluated the effects of GO nano coating on osseointegrative and antimicrobial characteristics of dental implants. Studies not written in English and published before 2012 were excluded.Results: The initial search yielded a total of 127 potential studies, of which six met the inclusion criteria and five were included in the review. These studies provided data on GO nano coated dental implants and their osseointegrative and antimicrobial properties. All the included studies showed moderate risk of bias. None of the studies provided information related to sample size calculation or sampling technique.The findings from the included studies demonstrated that GO nano coating had a positive impact on osseointegrative properties of dental implants. Enhanced bone-implant contact and increased bone density were observed in animals and humans receiving GO nano coated implants. Furthermore, the antimicrobial properties of GO nano coating were found to inhibit bacterial colonization and biofilm formation on the implant surface, reducing the risk of implant-associated infections.The findings indicate that GO nano coating holds promise in enhancing the success rate and longevity of dental implants. However, more studies with larger sample sizes, are needed to further strengthen the evidence and determine the long-term effects of GO nano coated dental implants.
DOI: 10.6084/m9.figshare.7404914.v1
title: Additional file 4: of Comparative proteomic investigation of drought responses in foxtail millet

description: Table S3. List of 2474 quantified proteins were found in all four replicates in foxtail millet after drought treatment. (XLS 97 kb)