cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5644996.v1
title: Detection, purification and characterization of a lectin from freshwater green algae Spirogyra spp.

description: ABSTRACT Freshwater algae are rich sources of structurally biologically active metabolites, such as fatty acids, steroids, carotenoids and polysaccharides. Among these metabolites, lectins stand out. Lectins are proteins or glycoproteins of non-immune origin which bind to carbohydrates or glycoconjugates, without changing ligand structure. Many studies have reported on the use of Spirogyra spp. as effective bioindicators of heavy metals; however, reports on Spirogyra molecular bioprospecting are quite limited. Therefore, this study aimed to detect, isolate, purify and characterize a lectin present in the freshwater green algae Spirogyra. Presence of the lectin protein in the extract was detected by hemagglutination assays. Subsequently, the protein extract was subjected to a sugar inhibition assay to identify the lectin-specific carbohydrate. Following this, the extract was applied to a guar gum column to afford the pure lectin. The lectin was inhibited by N-acetyl-glucosamine and N-acetyl-beta-D-mannose, but more strongly by D-galactose. The apparent molecular mass of the purified lectin was evaluated by Polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulfate (SDS-PAGE). Electrophoretic analysis revealed a single protein band with an apparent molecular mass of 56 kDa. Thus, it could be concluded that a lectin was purified from Spirogyra spp.
DOI: 10.3535/1y2-asc-trt
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yzj-fla-ztg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27194079.v1
title: Blockchain Assisted Signature and Certificate Based Protocol for Efficient Data.docx

description: The formal verification using Real-Or-Random (ROR) model shows that the derived session keys are secure. In addition, semantic security analysis shows that it is robust against typical smart grid attacks such as replays, forgery, privileged insider, side-channeling and impersonations.
DOI: 10.3535/dwt-8xy-kgm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l1l-v4s-sfr
title: †Leangella Öpik, 1933

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ne1-tq1-lgq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pjn-d6r-9gh
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m90-ade-vaj
title: Bioerosional trace fossils

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ma9-24e-v42
title: Anticalyptraea calyptrata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/4ps2zth23m
title: A Nonlinear ARDL Model of Inflation Dynamics in the Philippine Economy

description: The dependent variable of this study is the inflation rate based on the consumer price index (CPI) measured at the 2012 constant price obtained from the Philippine Statistical Authority (PSA). The international crude oil price (wop) is the simple average of three spot prices: Dated Brent, West Texas Intermediate, and the Dubai Fateh. The Crude oil unit is U.S. Dollar per barrel secured from World Bank as published by Index Mundi. Macroeconomic variables are also included in the model, such as real effective exchange (Ex) rate (Peso per U.S. Dollar) weighted average rate under the Philippine Dealing System (PDS) obtained from the Banko Sentral ng Pilipinas (BSP). The log value of the gross domestic product (lnq) taken from the PSA was used as a proxy to the demand condition of the economy; it is measured in a million Philippine peso at constant 2018 prices. The short-term interest rate (IntR) -91-day Treasury bill rate from the BSP was used as the monetary response variable to control oil shocks' inflationary effect.
DOI: 10.3535/c35-klb-9mj
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fvm-lfj-wyq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5160949.v1
title: Supplemental Material for Building Protection Against External Ionizing Fallout Radiation

description: The US Department of Defense is implementing the Regional Shelter Analysis methodology to improve the ability of the Hazard Prediction and Assessment Capability (HPAC) model to account for building protection. This HPAC improvement effort requires accurate estimates of building protection for common building construction types worldwide. The main report, titled <i>Building Protection Against External Ionizing Fallout Radiation,</i> (a) describes the physics most relevant to assessing fallout building protection, (b) identifies a set of key building attributes that are sufficient to characterize fallout shelter quality for individual buildings, and (c) assesses the degree to which the building attributes can characterize fallout shelter quality. This report provides more detail on the data used to verify the conclusions presented in the main report.
DOI: 10.3535/37k-fr5-37h
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qz1-m8r-rj6
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/mwzfb2kwh5
title: Data for: Geo-statistical and multivariate analysis of potentially toxic elements’ distribution in the soil of Hainan Island (China): a comparison between the topsoil and subsoil at a regional scale

description: Supplementary Materials for the manuscript
DOI: 10.3535/bpy-9e7-frw
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fge-0pj-s57
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/dvjxxbf23c
title: Dataset to the atricle "Pedosedimentary Archive of the Kostenki 21 (Gmelin) Site"

description: This dataset is connected with the article "Pedosedimentary Archive of the Kostenki 21 (Gmelin) Site as a Memory of the Dynamics of Periglacial Geosystems in the Extreme Conditions of the Last Glacial Maximum" by Svetlana Sycheva, Olga Khokhlova, Aleksander Bessudnov
DOI: 10.3535/hw8-jk3-hv4
title: Favositidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pcm-w9k-a25
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0wx-f74-c3f
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1z9-pbb-s3k
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/648zntv5dx
title: Human TBK1 Deficiency Leads to Autoinflammation Driven by TNF-Induced Cell Death - Bulk RNAseq

description: Bulk RNA sequencing of hTERT-immortalized dermal fibroblasts derived from two TBK1-deficient patients and three HCs following a 24 hr stimulation with 10 ug/mL poly(I:C) with and without Lipofectamine 2000.
DOI: 10.3535/51c-2mw-sdk
title: †Leangella Öpik, 1933

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rqz-0ce-kqv
title: †Isorthis Kozlowski, 1929

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/584-7f6-j49
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vs9-bvs-nzx
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/xh8mgjbtj5
title: More banks, less education? Evidence from China

description: （1）It is best to use Stata 16 or higher to support simplified Chinese because there is a lot of raw data with Chinese information
（2）The folder named "Bank deregulation shock" includes the raw data and do file for banking concentration viables.
（3）The folder named "Census raw data and data processing" includes the Census raw data and do file for making regression data.
 （4）If you want to get the regression result directly, use the "regression" do file in the root directory.
（5）As the large amount of data, if there is anything missing or unclear in the data, please contact me directly by email. The email address is: xiangyitian741@163.com
DOI: 10.3535/62t-9ek-npk
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/752-f48-tpp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1cx-yh2-rnm
title: Hyolitha

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1zg-wly-r0r
title: Hyolitha

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/7j2fpm5dbp
title: Data for: Do (all) sectoral shocks lead to aggregate volatility? Empirics from a production network perspective

description: This dataset includes data on network properties of sectors based on the World Input-Output Database (WIOD). See Joya and Rougier, Do (all) sectoral shocks lead to aggregate volatility? Empirics from a production network perspective for further information on the variables.
DOI: 10.17632/tyg8y4xt8s
title: Polyfit — A package for polynomial fitting

description: Abstract Polynomials P(x) of arbitrary degree are fitted with or without constraints, to a given set of points (X_n , Y_n ), n = 1,...,N; N &gt; 1, using the least squares method. A weight ω_nmay be assigned to each point and/or an error - or fluctuation - ΔY_nto the respective Y_n 's. Two kinds of constraints may be specified: 1) Fixed subset of the polynomial's coefficients and 2) P(ξ_q ) = η_q , q = 1,...,Q, Q &gt; 0 for given points (ξ_q , η_q ), q = 1,...,Q. The problem is reduced to a system of li... Title of program: POLYFIT Catalogue Id: ABFP_v1_0 Nature of problem Fitting a polynomial to a given data set is a problem appearing in most branches of experimental and theoretical physics. Versions of this program held in the CPC repository in Mendeley Data ABFP_v1_0; POLYFIT; 10.1016/0010-4655(89)90117-3 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/p6j-a28-amh
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/87k9rssdm4
title: NCodR: A multi-class SVM classification to distinguish between non-coding RNAs in Viridiplantae

description: Non-coding RNAs (ncRNA) are major players in the regulation of gene expression. However, the identification and classification of ncRNAs are major bottlenecks in understanding their functional roles. This study analyses seven classes of ncRNAs in plants using sequence and secondary structure-based RNA folding measures. Support vector machines employing radial basis function show the highest accuracy in discriminating ncRNAs, and the classifier is implemented as a web server, NCodR. This study will provide a reliable platform for the genome-wide prediction and classification of ncRNAs in plants and enrich our understanding of plant ncRNAs, which may be further used for crop improvements using genome-editing technology. The codes are available at https://gitlab.com/sunandanmukherjee/ncodr while the webserver is available at http://www.csb.iitkgp.ac.in/applications/NCodR/index

A dataset of ncRNAs in Viridiplantae was curated to quantify the various sequence and RNA folding measures, which is further used to classify ncRNAs. The dataset was curated from RNACentral, applying the filters on the ncRNA class and species names. The RNACentral consolidates data from several databases. While curating the dataset, the sequences with degenerate letters for the bases and ambiguous letters such as ‘N’ were removed. Sequences that repeated multiple times in the dataset were also removed to make them unique. A total of 5,26,552 sequences curated, is available as ncRNA_seqences.fa.tar.gz file.  
A dataset of 17, 026 mRNAs was curated to use as ‘others’ category in the training of classifier is available as mRNA_sequences.fa.tar.gz file. The mRNAs from 271 different e species were downloaded from PlantGDB database and were clustered at 50% identity cut-off using CD-hit program.

The different features calculated as described in the Materials and Methods section of the manuscript for ncRNAs, mRNAs and lncRNA sequences from PLncDB are available as  ncRNAs_features.tar.gz, mRNA_features.tar.gz and lncRNAs_PLncDB_features.tar.gz, respectively. 

Even though the overall dataset of ncRNAs used to train the classifier is diverse in terms of the taxa included, the data for lncRNAs comes only from two major groups: monocots and eudicots (Table 2). The limited availability of data from diverse taxonomic groups for the lncRNA class may cause the classifier to have limited predictive ability for lncRNAs. To test this, we curate an additional dataset of lncRNAs from four different species that were not included in the original training dataset. lncRNA sequences of M. pusilla and S. moellendorffii were downloaded from the GREENC database while that of G. sulphuraria and P. patens were from CANTATAdb. The sequences and prediction results are available in the file Test_Cases_lncRNAs.tar.gz
DOI: 10.3535/8xm-n6q-hjl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rkb-689-rs4
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1564853.v1
title: Yearly count of articles in Web of Science matching our bibliometric search on catastrophe-related keywords

description: Yearly count of the number of scientific articles in selected economics journals matching the query terms catastrophe, catastrophes, catastrophic, disaster, disasters and disastrous.<br><br>Journals are American Economic Journal: Applied Economics, American Economic Journal: Economic Policy, American Economic Journal: Macroeconomics, American Economic Journal: Microeconomics, American Economic Review, Econometrica, Economic Journal, European Economic Review, Games and Economic Behavior, International Economic Review, Journal of Econometrics, Journal of Economic Theory, Journal of Finance, Journal of Financial Economics, Journal of International Economics, Journal of Labor Economics, Journal of Monetary Economics, Journal of Political Economy, Journal of Public Economics, Journal of the European Economic Association, Rand Journal of Economics, Review of Economics and Statistics, Review of Economic Studies, Quantitative Economics, Quarterly Journal of Economics, Theoretical Economics, American Journal of Agricultural Economics, Ecological Economics, Energy Economics, Environmental and Development Economics, Environmental and Resource Economics, Journal of Agricultural and Resource Economics, Journal of Environmental Management and Economics, Land Economics, Review of Environmental Economics and Policy.<br>
DOI: 10.3535/35s-j4e-eez
title: Acanthodii

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vlx-glv-8pr
title: Palaeoconchus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/7v54nk37mf
title: Engagement with a mobile-based assessment application in English as a Second Language Courses

description: Data collected from the interaction of N=120 students with a mobile-based assessment application in eight English as a Second Language courses in Colombia. The purpose was to apply the survival analysis method to determine if the time at which students disengage from the application was influenced by the acceptance of the appliction and the student motivation. The data set has the following columns: ID=internal ID of student reported_effort=self-reported measure of effort. feedback=number of times that students received corrective feedback in the mobile-based assessment app. interface= self-reported measure of the perception of the interface. perceived_ease_of_use = self-reported measure perceived ease of use. perceived_usefulness=self-reported measure perceived usefulness. behavioral_intention= self-reported measure of behavioral intention. Importance= self-reported measure of perception of importance. correctAnswers=total number of correct answers provided by the students in the mobile-based assessment app. time_ontask= total amount of time automatically measured by the mobile-based assessment app of the time students were answering questions in the application status=if students failed to answer an adequate number of questions in the mobile-based assessment app.
DOI: 10.3535/1s9-jtj-ag0
title: †Dalmanellidae Schuchert, 1913

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d0d-26y-m4g
title: †Dalmanella Hall & Clarke, 1892

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.904925.v1
title: Pollen viability data

description: Raw pollen viability data for the paper, <br>"Near-Absent Levels Of Segregational Variation Suggest Limited Opportunities For The Introduction Of Genetic Variation Via Homeologous Chromosome Pairing In Synthetic Neoallotetraploid Mimulus", to be published in G3.
DOI: 10.17632/5gp6bncftk
title: Data for: Methodological choices drive differences in environmentally-friendly dietary solutions

description: Supplementary Material S1 (description of review process and data treatment) and Supplementary Material S2 (raw data collected from studies reviewed) for the manuscript entitled 'Methodological choices drive differences in environmentally-friendly dietary solutions'
DOI: 10.3535/7c8-s0s-zmw
title: †Dalmanella Hall & Clarke, 1892

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cbk-hma-ykx
title: †Dalmanella Hall & Clarke, 1892

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/mfkd9hjkgk
title: Data for publication

description: Data for publication in Data in Brief
DOI: 10.3535/mp6-skv-vev
title: Animalia

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sz0-z7z-zwm
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7082501.v1
title: dataset for Maza at al.

description: Data used to write the paper entitled "On the Drivers of UK Direct Investment in the Spanish Regions: A Spatial Durbin Approach"<br>
DOI: 10.17632/73t52vhpdd
title: Data for: "Advancing simulations of water fluxes, soil moisture and drought stress by using the LWF-Brook90 hydrological model in R"

description: This supplementary material contains daily observations of soil water storage (2011-2012), meteorological data (1980-2013), and soil data from a poplar short rotation coppice located in Kaufering, Germany (folder "Input"). The data were used to conduct sensitivity analysis and Bayesian model calibration of the SVAT model LWF-Brook90 implemented in the LWFBrook90R R-package. The results of these simulations and calibrations are also included, so that the examples from the Appendix C and D of the manuscript can be reproduced without running the long computations.
DOI: 10.3535/fae-mm4-dwx
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sf4-7ca-ban
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12762851.v1
title: Dataset S5 - timeperiods.txt

description: Text file for BioGeoBEARS analysis in R, containing time slices representing a change in matrices.
DOI: 10.3535/a62-avc-v5m
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z7a-pqy-7bq
title: Ooid-limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20449887.v1
title: Table ST3 - significant motifs shared between Sm2 and Sm3 cells exposed to APM or WSP and evaluated by ATAC-seq and TFEA

description: Significantly enriched and depleted TFEA motifs (padj &lt; 1e-5) from SAEC-ATAC-seq analysis for Sm2 and Sm3 cells exposed to APM or WSP, categorized by shared motifs to reflect the Venn diagrams in Figure 3B.
DOI: 10.3535/n2b-7f7-r2m
title: Acanthodii

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.