cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.g4z879
title: FAIRsharing record for: The Open Science Framework
title: OSF

description: This FAIRsharing record describes:  The Open Science Framework (OSF) is a free and open free, open repository and platform to enable collaboration and support the entire research lifecycle: planning, execution, reporting, archiving, and discovery. Features include automated versioning, logging of all actions, collaboration support, free and unlimited file storage, registrations, and connections to other tools/services (ie. Dropbox, figshare, Amazon S3, Dataverse, GitHub). It is 100% free to researchers, open source, and intended for use in all domain areas. OSF has an open, public API to support broad indexing, as well as a partnership with Internet Archive for long-term preservation with a $250k preservation fund and an IMLS grant for transfer to Internet Archive (currently in progress). The OSF supports embargoing during peer review via a view-only link with the ability to anonymize contributor list. It also provides managed access by allowing access requests and private sharing settings. OSF is a non-profit with direct funder support through grants, government contracts, and community memberships.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.44wk5g
title: FAIRsharing record for: Open Connectome Project
title: OCP

description: This FAIRsharing record describes:  Open Connectome Project: Reverse Engineering the Brain One Synapse at a Time
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.vcmz9h
title: FAIRsharing record for: SICAS Medical Image Repository
title: SMIR

description: This FAIRsharing record describes:  The Sicas Medical Image Repository is a medical database for academic, scientific, technical and clinical biomedical research and collaboration. Registration is required for data download and usage, although browsing and searching is available without registration.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.zvh04m
title: FAIRsharing record for: Alternative Poly(A) Sites database 2.0
title: APASdb 2.0

description: This FAIRsharing record describes:  APASdb provides information on Alternative Poly(A) (APA) isoforms for all genes. It describes heterogeneous cleavage sites downstream of poly(A) signals, and maintains near complete coverage for APA sites. APASdb provides the quantification of a given APA variant among transcripts with different APA sites by computing their corresponding normalized-reads. In addition, APASdb supports URL-based retrieval, browsing and display of exon-intron structure, poly(A) signals, poly(A) sites location and usage reads, and 3'-untranslated regions (3'-UTRs). Currently, APASdb involves APA in various biological processes and diseases in human, mouse and zebrafish.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.bpkzqp
title: FAIRsharing record for: Immunology Database and Analysis Portal
title: ImmPort

description: This FAIRsharing record describes:  The Immunology Database and Analysis Portal (ImmPort) data repository was created for the exploration of clinical and basic research data on immunology and associated findings. ImmPort intends to promote effective data sharing across the basic, clinical and translational research communities. It collects data both from clinical and mechanistic studies on human subjects and from immunology studies on model organisms. The ImmPort ecosystem consists of four components: private data, shared data, data analysis, and resources-for data archiving, dissemination, analyses, and reuse.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.q9neh8
title: FAIRsharing record for: MGI Mouse Gene Expression Database
title: GXD

description: This FAIRsharing record describes:  The Gene Expression Database (GXD) is a community resource for gene expression information from the laboratory mouse. GXD stores and integrates different types of expression data and makes these data freely available in formats appropriate for comprehensive analysis. There is particular emphasis on endogenous gene expression during mouse development.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.r4ph5f
title: FAIRsharing record for: Image Data Archive
title: IDA

description: This FAIRsharing record describes:  The LONI Image Data Archive (IDA) is a user-friendly environment for archiving, searching, sharing, tracking and disseminating neuroimaging and related clinical data. The IDA is utilized for dozens of neuroimaging research projects across North America and Europe and accommodates MRI, PET, MRA, DTI and other imaging modalities. The Image & Data Archive (IDA) provides tools and resources for de-identifying, integrating, searching, visualizing and sharing a diverse range of neuroscience data, helping facilitate collaborations between scientists worldwide.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.xw1wj5
title: FAIRsharing record for: Immune Tolerance Network TrialShare
title: TrialShare

description: This FAIRsharing record describes:  The immune tolerance data management and visualization portal for studies sponsored by the Immune Tolerance Network (ITN) and collaborating investigators. Data from published studies are accessible to any user; data from current in-progress studies are accessible to study investigators and collaborators. Includes links to published figures, tools for visualization and analysis of data, and ability to query study data by subject, group, or any other study parameter.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.327nbg
title: FAIRsharing record for: Kyoto Encyclopedia of Genes and Genomes
title: KEGG

description: This FAIRsharing record describes:  KEGG is a database resource for understanding high-level functions and utilities of the biological system, such as the cell, the organism and the ecosystem, from molecular-level information, especially large-scale molecular datasets generated by genome sequencing and other high-throughput experimental technologies.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ctdss6
title: FAIRsharing record for: VertNet
title: VertNet

description: This FAIRsharing record describes:  VertNet is a NSF-funded collaborative project that makes biodiversity data free and available on the web. VertNet is a tool designed to help people discover, capture, and publish biodiversity data. It is also the core of a collaboration between hundreds of biocollections that contribute biodiversity data and work together to improve it. VertNet is an engine for training current and future professionals to use and build upon best practices in data quality, curation, research, and data publishing.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.8a0a61
title: FAIRsharing record for: Fulgoromorpha Lists On the Web
title: FLOW

description: This FAIRsharing record describes:  Fulgoromorpha Lists On the Web (FLOW) is an online database that aims to provide an easy-access summary of available biological published primary data on planthoppers (Hemiptera, Fulgoromorpha), a group of major economic importance. It includes information on taxonomy, nomenclature, bibliography, distribution and various associated biological information on host-plants and parasites (including fossils).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.npf403
title: FAIRsharing record for: Swedish Ocean Archive
title: SHARK

description: This FAIRsharing record describes:  SHARK ("Svenskt HavsARKiv" / "Swedish Ocean Archive") contains marine environmental monitoring data from the seas surrounding Sweden. SHARK is accessed via SHARKweb (for human-readable content) and SHARKdata (for computational access). Content includes marine physical, chemical and biological data collected within Swedish environmental monitoring programs.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.pjmdrp
title: FAIRsharing record for: speciesLink
title: speciesLink

description: This FAIRsharing record describes:  speciesLink (also known as the Distributed Information System for Biological Collections: Integrating Species Analyst and SinBiota (FAPESP)) implements a distributed information system to retrieve primary biodiversity data from collections within the state of São Paulo (Brazil) as well as data integrated from other networks and observation data registered in the SinBiota database.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ce8nsj
title: FAIRsharing record for: EuroPhenome
title: EuroPhenome

description: This FAIRsharing record describes:  The EuroPhenome project provides access to raw and annotated mouse phenotyping data generated from primary pipelines such as EMPReSSlim and secondary procedures from specialist centres. Mutants of interest can be identified by searching the gene or the predicted phenotype.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.jr4y76
title: FAIRsharing record for: Canadensys
title: Canadensys

description: This FAIRsharing record describes:  Biological collections are replete with taxonomic, geographic, temporal, numerical, and historical information. This information is crucial for understanding and properly managing biodiversity and ecosystems, but is often difficult to access. Data publication is the act of making that information available online, and is the core mission of Canadensys. Most of the datasets contain specimen data, but checklists and observation data are present as well.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.rf3m4g
title: FAIRsharing record for: Plant Genomics and Phenomics Research Data Repository
title: PGP

description: This FAIRsharing record describes:  This repository provides several plant genomic and phenotypic datasets resulting from IPK and German Plant Phenotyping Network (DPPN) research activities. It was established in January 2015. The background of the study is in plant genetic resources, in particular the association of genotypes and phenotypes. This archive aims to provide data from the "system plant" - from the root to bloom and seed, as well from sequence analysis to systems biology.Ge
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.84ebcy
title: FAIRsharing record for: Stem Cell Commons
title: SCC

description: This FAIRsharing record describes:  The Stem Cell Commons were initiated by the Harvard Stem Cell Institute to develop a community for stem cell bioinformatics. This open source environment for sharing, processing and analyzing stem cell data brings together stem cell data sets with tools for curation, dissemination and analysis. Standardization of the analytical approaches will enable researchers to directly compare and integrate their results with experiments and disease models in the Commons.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.1mapgk
title: FAIRsharing record for: NIDDK Information Network
title: dkNET

description: This FAIRsharing record describes:  The NIDDK Information Network provides access to large pools of data relevant to the mission of NIDDK. The dkNET portal contains information about research resources such as antibodies, vectors and mouse strains, data, protocols, and literature.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.an0y9t
title: FAIRsharing record for: NanoMaterial Registry
title: Nano Registry

description: This FAIRsharing record describes:  The Nanomaterial Registry is a central registry and growing repository of publicly-available nanomaterial data which are fully curated based upon a set of Minimal Information about Nanomaterials (MIAN). Each nanomaterial curated into the Registry provides the following information: Physico-characteristics – values, protocols, metadata; Information on the related biological and/or environmental studies; Instance of Characterization information – preparation, synthesis, and time frame leading up to the nanomaterial characterization; and  Validation back to the Data Source, such as scholarly article, manufacturer’s website. As both the original homepage (http://www.nanomaterialregistry.org/) and data browser are not functional, we have marked this record as Uncertain. Please get in touch with us if you have any information on this resource.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.pqnhpj
title: FAIRsharing record for: Medical Information Mart for Intensive Care III
title: MIMIC-III

description: This FAIRsharing record describes:  MIMIC-III (Medical Information Mart for Intensive Care III) is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The database includes information such as demographics, vital sign measurements made at the bedside (~1 data point per hour), laboratory test results, procedures, medications, caregiver notes, imaging reports, and mortality (both in and out of hospital). MIMIC supports a diverse range of analytic studies spanning epidemiology, clinical decision-rule improvement, and electronic tool development. I
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.pr47jw
title: FAIRsharing record for: NIDDK Central Repository
title: NIDDK

description: This FAIRsharing record describes:  The NIDDK Central Repository stores biosamples, genetic and other data collected in designated NIDDK-funded clinical studies. The purpose of the NIDDK Central Repository is to expand the usefulness of these studies by allowing a wider research community to access data and materials beyond the end of the study.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ejeqy
title: FAIRsharing record for: Human Connectome Project
title: HCP

description: This FAIRsharing record describes:  The Human Connectome Project (HCP) houses and distributes public connectome study data for a series of studies that focus on the connections within the human brain.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.tamp4p
title: FAIRsharing record for: Parkinson's Progression Markers Initiative
title: PPMI

description: This FAIRsharing record describes:  PPMI is an observational clinical study to verify progression markers in Parkinson’s disease. The study is designed to establish a comprehensive set of clinical, imaging and biosample data that will be used to define biomarkers of PD progression. Once these biomarkers are defined, they can be used in therapeutic studies. The clinical, imaging and biologic data are accessible to researchers in real time through the website.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.djyk2c
title: FAIRsharing record for: MoonProt
title: MoonProt

description: This FAIRsharing record describes:  MoonProt Database is a manually curated, searchable, internet-based resource with information about the over 200 proteins that have been experimentally verified to be moonlighting proteins. Moonlighting proteins comprise a class of multifunctional proteins in which a single polypeptide chain performs multiple biochemical functions that are not due to gene fusions, multiple RNA splice variants or pleiotropic effects. The availability of this organized information provides a more complete picture of what is currently known about moonlighting proteins. The database will also aid researchers in other fields, including determining the functions of genes identified in genome sequencing projects, interpreting data from proteomics projects and annotating protein sequence and structural databases. In addition, information about the structures and functions of moonlighting proteins can be helpful in understanding how novel protein functional sites evolved on an ancient protein scaffold, which can also help in the design of proteins with novel functions.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.j45zag
title: FAIRsharing record for: H-Invitational Database
title: H-InvDB

description: This FAIRsharing record describes:  H-Invitational Database (H-InvDB) is an integrated database of human genes and transcripts. By extensive analyses of all human transcripts, we provide curated annotations of human genes and transcripts that include gene structures, alternative splicing variants, non-coding functional RNAs, protein functions, functional domains, sub-cellular localizations, metabolic pathways, protein 3D structure, genetic polymorphisms (SNPs, indels and microsatellite repeats) , relation with diseases, gene expression profiling, and molecular evolutionary features , protein-protein interactions (PPIs) and gene families/groups.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.