cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5739669
title: The dataset of the manuscript "A Fully Convolutional Network for weed mapping of Unmanned Aerial Vehicle (UAV) Imagery"

description: The folder 'rice_data' containing the training dataset and validation dataset.<br>All the UAV imagery were in the folder: 'rice_data\image': DJI_0087_0.png DJI_0087_1.png ......All the Ground Truth images was in the folder: 'rice_data\image': DJI_0087_0.png DJI_0087_1.png ......The Ground Truth images correspond to the UAV imagery with a same name<br>The file names of the training dataset were recorded in the file 'rice_data\train.txt' using the form like: image/DJI_0114_2.png gt_image/DJI_0114_2.png ......Each line in the file 'rice_data\train.txt' represents one sample, where the names of UAV imagery and the Ground Truth image were separated by a blank.<br>The file names of the training dataset was recorded in the file 'rice_data\val.txt' like: image/DJI_0101_2.png gt_image/DJI_0101_2.png ......Each line in the file 'rice_data\val.txt' represents one sample, where the names of the UAV imagery and the Ground Truth image were separated by a blank.<br>
DOI: 10.6084/m9.figshare.5739687
title: Identification of an endangered tree as a new record of <i>Cordia macleodii</i>, with an update of <i>Cordia</i> in West Bengal, India

description: We have identified a hitherto undescribed tree, locally known as <i>Sitapatra</i>, which has never been mentioned in any publication of the region’s flora. However, by using morphological and molecular analyses, we identified it as <i>Cordia macleodii</i> (Cordiaceae). Several novel traits, never mentioned in previous taxonomic works, were observed and added to the description of the species. We suggest the conservation status of the species to be Critically Endangered, based on the criteria of a critically small population size in a narrow extent of occurrence, and the absence of flowering for 12 years in the past. Subsequently, we have updated here the distribution of <i>Cordia</i> L. in West Bengal, based on records from herbaria and recent publications, as well as our field observations. A distribution map for three native and an exotic species is presented. We find that although the protologue of <i>C. macleodii</i> indicates its type collection from central India, the herbarium record at Royal Botanic Garden, Kew mistakenly shows its type locality as West Bengal.
DOI: 10.6084/m9.figshare.5739687.v1
title: Identification of an endangered tree as a new record of <i>Cordia macleodii</i>, with an update of <i>Cordia</i> in West Bengal, India

description: We have identified a hitherto undescribed tree, locally known as <i>Sitapatra</i>, which has never been mentioned in any publication of the region’s flora. However, by using morphological and molecular analyses, we identified it as <i>Cordia macleodii</i> (Cordiaceae). Several novel traits, never mentioned in previous taxonomic works, were observed and added to the description of the species. We suggest the conservation status of the species to be Critically Endangered, based on the criteria of a critically small population size in a narrow extent of occurrence, and the absence of flowering for 12 years in the past. Subsequently, we have updated here the distribution of <i>Cordia</i> L. in West Bengal, based on records from herbaria and recent publications, as well as our field observations. A distribution map for three native and an exotic species is presented. We find that although the protologue of <i>C. macleodii</i> indicates its type collection from central India, the herbarium record at Royal Botanic Garden, Kew mistakenly shows its type locality as West Bengal.
DOI: 10.6084/m9.figshare.5740269
title: Nutrient solution and pakchoi

description: Supplimental
 Data for Figures (Fig. 1 to Fig. 4)
 
 
 X. Ding, Y. Jiang, H. Zhao, D. Guo, L. He,
 F. Liu, Q. Zhou, D. Nandwani, D. Hui, J. Yu. Electrical conductivity (EC) of
 nutrient solution influenced photosynthesis, quality, nitrate and nitrite
 accumulations, and antioxidant enzyme activity of pakchoi (Brassica
 campestris L) in a hydroponic system.
 
 
 Data sheets for Fig 1: Fresh weight, Dry weight
 
 
 Data sheets for Fig 2: Pn, Gs,
 Ci, Tr
 
 
 Data sheets for Fig 3: Nitrate
 content , Nitrite content 
 
 
 Data sheets for Fig 5: G-POD, SOD
DOI: 10.6084/m9.figshare.5740269.v1
title: Nutrient solution and pakchoi

description: Supplimental
 Data for Figures (Fig. 1 to Fig. 4)
 
 
 X. Ding, Y. Jiang, H. Zhao, D. Guo, L. He,
 F. Liu, Q. Zhou, D. Nandwani, D. Hui, J. Yu. Electrical conductivity (EC) of
 nutrient solution influenced photosynthesis, quality, nitrate and nitrite
 accumulations, and antioxidant enzyme activity of pakchoi (Brassica
 campestris L) in a hydroponic system.
 
 
 Data sheets for Fig 1: Fresh weight, Dry weight
 
 
 Data sheets for Fig 2: Pn, Gs,
 Ci, Tr
 
 
 Data sheets for Fig 3: Nitrate
 content , Nitrite content 
 
 
 Data sheets for Fig 5: G-POD, SOD
DOI: 10.26180/24773367
title: Inferring system parameters from the bursts of the accretion-powered pulsar IGR J17498–2921 (Galloway et al. 2024): accompanying data & tables

description: Data and tables accompanying "Inferring system parameters from the bursts of the accretion-powered pulsar IGR J17498–2921" by Galloway et al. (2024), submitted to MNRASThe data files encompass analysis of thermonuclear bursts from two millisecond pulsars, SAX J1808.4-3658 and IGR J17498–2921, with the beansp Python package. The code is available at Github, https://github.com/adellej/beans; and also via PyPI. A snapshot of the code used to generate the results for the paper is stored here as beans-2.25.0.tar. Below we describe each of the files for each source.SAX J1808.4-36581808_obs.txt - 3-25 keV persistent flux measurements during the 2002 outburst1808_bursts.txt - burst parameters from the 2002 outburst1808_base.ini - beansp parameter file to run the MCMC chains for the "base" run1808_base_10k.p - base run posterior samples 1808_base_parameterconstraints.txt – parameter summary as listed in Table 2table1.mrt - machine-readable format file including measured and inferred burst parametersIGR J17498–292117498_obs_falanga12.txt - 0.1-300 keV persistent flux measurements during the 2011 outburst17498_bursts_8.txt - bursts observed during the 2011 outburst17498_base22p.ini - beansp parameter file to run the MCMC chains for the "base" run17498_base22p_10k.p - base run posterior samples17498_base22p_parameterconstraints.txt – parameter summary as listed in Table 2table3.mrt - machine-readable format file including measured and inferred burst parameters
DOI: 10.26180/24773367.v1
title: Inferring system parameters from the bursts of the accretion-powered pulsar IGR J17498–2921 (Galloway et al. 2024): accompanying data & tables

description: Data and tables accompanying "Inferring system parameters from the bursts of the accretion-powered pulsar IGR J17498–2921" by Galloway et al. (2024), submitted to MNRASThe data files encompass analysis of thermonuclear bursts from two millisecond pulsars, SAX J1808.4-3658 and IGR J17498–2921, with the beansp Python package. The code is available at Github, https://github.com/adellej/beans; and also via PyPI. A snapshot of the code used to generate the results for the paper is stored here as beans-2.25.0.tar. Below we describe each of the files for each source.SAX J1808.4-36581808_obs.txt - 3-25 keV persistent flux measurements during the 2002 outburst1808_bursts.txt - burst parameters from the 2002 outburst1808_base.ini - beansp parameter file to run the MCMC chains for the "base" run1808_base_10k.p - base run posterior samples 1808_base_parameterconstraints.txt – parameter summary as listed in Table 2table1.mrt - machine-readable format file including measured and inferred burst parametersIGR J17498–292117498_obs_falanga12.txt - 0.1-300 keV persistent flux measurements during the 2011 outburst17498_bursts_8.txt - bursts observed during the 2011 outburst17498_base22p.ini - beansp parameter file to run the MCMC chains for the "base" run17498_base22p_10k.p - base run posterior samples17498_base22p_parameterconstraints.txt – parameter summary as listed in Table 2table3.mrt - machine-readable format file including measured and inferred burst parameters
DOI: 10.6084/m9.figshare.5742492
title: Additional file 1: of Refine gene functional similarity network based on interaction networks

description: CoreComplexes.xls is the referenced complex downloaded from the CORUM database. (XLS 1637 kb)
DOI: 10.6084/m9.figshare.5742492.v1
title: Additional file 1: of Refine gene functional similarity network based on interaction networks

description: CoreComplexes.xls is the referenced complex downloaded from the CORUM database. (XLS 1637 kb)
DOI: 10.6084/m9.figshare.5742498
title: Additional file 3: Table S2. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: Samples sequenced in this study. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.5742498.v1
title: Additional file 3: Table S2. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: Samples sequenced in this study. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.5742510
title: Additional file 2: of Refine gene functional similarity network based on interaction networks

description: PredictedComplex.xls is the prediction results of CPL algorithm based on RGFSN. (XLS 622 kb)
DOI: 10.6084/m9.figshare.5742510.v1
title: Additional file 2: of Refine gene functional similarity network based on interaction networks

description: PredictedComplex.xls is the prediction results of CPL algorithm based on RGFSN. (XLS 622 kb)
DOI: 10.6084/m9.figshare.5742522
title: Additional file 4: Table S3. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: Previously sequenced samples that are used in this study. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.5742522.v1
title: Additional file 4: Table S3. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: Previously sequenced samples that are used in this study. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.5742540
title: Additional file 5: Table S5. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: Geographic information of the representative samples used in the ecological niche modeling (ENM) analysis. The geographic region was divided via longitude range and latitude range: Europe (192 samples) = E8.54 ~ 38.28 and N31.47 ~ 61.36; central Asia (48 samples) = E42.22 ~ 90.34 and N37.29 ~ 58.01; eastern Asia (51 samples) = E98.63 ~ 120.37 and N26.75 ~ 33.15. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.5742540.v1
title: Additional file 5: Table S5. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: Geographic information of the representative samples used in the ecological niche modeling (ENM) analysis. The geographic region was divided via longitude range and latitude range: Europe (192 samples) = E8.54 ~ 38.28 and N31.47 ~ 61.36; central Asia (48 samples) = E42.22 ~ 90.34 and N37.29 ~ 58.01; eastern Asia (51 samples) = E98.63 ~ 120.37 and N26.75 ~ 33.15. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.5742555
title: Additional file 6: Table S6. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: Genes under positive selection based on the overlapping of the two different methods. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.5742555.v1
title: Additional file 6: Table S6. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: Genes under positive selection based on the overlapping of the two different methods. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.5742570
title: Additional file 7: Table S8. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: The 999 accessions used for the SVP gene haplotype analysis. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.5742570.v1
title: Additional file 7: Table S8. of Adaptation of Arabidopsis thaliana to the Yangtze River basin

description: The 999 accessions used for the SVP gene haplotype analysis. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.5742579
title: Additional file 1: of GTZ: a fast compression and cloud transmission tool optimized for FASTQ files

description: Compression ratios, compression time and descriptions of datasets are included in this file. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.5742741
title: Additional file 1: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: Disease-gene associations. (TXT 2080Â kb)
DOI: 10.6084/m9.figshare.5742741.v1
title: Additional file 1: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: Disease-gene associations. (TXT 2080Â kb)
DOI: 10.6084/m9.figshare.5742747
title: Additional file 2: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: Disease-lncRNA associations. (TXT 3Â kb)
DOI: 10.6084/m9.figshare.5742747.v1
title: Additional file 2: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: Disease-lncRNA associations. (TXT 3Â kb)
DOI: 10.6084/m9.figshare.5742768
title: Additional file 3: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: Disease-miRNA associations. (TXT 132Â kb)
DOI: 10.6084/m9.figshare.5742768.v1
title: Additional file 3: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: Disease-miRNA associations. (TXT 132Â kb)
DOI: 10.6084/m9.figshare.5742783
title: Additional file 4: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: Benchmark set of similar disease pairs. (TXT 11Â kb)
DOI: 10.6084/m9.figshare.5742783.v1
title: Additional file 4: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: Benchmark set of similar disease pairs. (TXT 11Â kb)
DOI: 10.6084/m9.figshare.5742798
title: Additional file 5: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: lncRNA functional similarity scores. (TXT 3310Â kb)
DOI: 10.6084/m9.figshare.5742798.v1
title: Additional file 5: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: lncRNA functional similarity scores. (TXT 3310Â kb)
DOI: 10.6084/m9.figshare.5742813
title: Additional file 6: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: miRNA functional similarity scores. (TXT 9539Â kb)
DOI: 10.6084/m9.figshare.5742813.v1
title: Additional file 6: of Measuring disease similarity and predicting disease-related ncRNAs by a novel method

description: miRNA functional similarity scores. (TXT 9539Â kb)
DOI: 10.6084/m9.figshare.5742960
title: Additional file 10: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 395 non-SMGs showed different expression patterns in the groups of FIGO stage patients. (XLSX 34Â kb)
DOI: 10.6084/m9.figshare.5742960.v1
title: Additional file 10: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 395 non-SMGs showed different expression patterns in the groups of FIGO stage patients. (XLSX 34Â kb)
DOI: 10.6084/m9.figshare.5742972
title: Additional file 11: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of the 24 non-SMGs that were found from 395 non-SMGs by using VCPA. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.5742972.v1
title: Additional file 11: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of the 24 non-SMGs that were found from 395 non-SMGs by using VCPA. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.5743041
title: Additional file 1: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: The list of SMGs in ECs that were collected from the website. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5743041.v1
title: Additional file 1: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: The list of SMGs in ECs that were collected from the website. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5743050
title: Additional file 2: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 1053 non-SMGs showed different expression patterns in the groups of histological grade patients. (XLSX 80Â kb)
DOI: 10.6084/m9.figshare.5743050.v1
title: Additional file 2: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 1053 non-SMGs showed different expression patterns in the groups of histological grade patients. (XLSX 80Â kb)
DOI: 10.6084/m9.figshare.5743056
title: Additional file 3: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 4 SMGs showed different expression patterns in the groups of histological grade patients. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.5743056.v1
title: Additional file 3: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 4 SMGs showed different expression patterns in the groups of histological grade patients. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.5743062
title: Additional file 4: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: The KEGG pathways with significant enrichment of 1053 non-SMGs. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.5743062.v1
title: Additional file 4: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: The KEGG pathways with significant enrichment of 1053 non-SMGs. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.5743065
title: Additional file 5: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of the 23 non-SMGs that were identified from 1053 non-SMGs by using VCPA. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.5743065.v1
title: Additional file 5: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of the 23 non-SMGs that were identified from 1053 non-SMGs by using VCPA. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.5743071
title: Additional file 6: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 1273 non-SMGs showed different expression patterns in the groups of histological type patients. (XLSX 95Â kb)
DOI: 10.6084/m9.figshare.5743071.v1
title: Additional file 6: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 1273 non-SMGs showed different expression patterns in the groups of histological type patients. (XLSX 95Â kb)
DOI: 10.6084/m9.figshare.5743077
title: Additional file 7: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 4 SMGs showed different expression patterns in the groups of histological type patients. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.5743077.v1
title: Additional file 7: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of 4 SMGs showed different expression patterns in the groups of histological type patients. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.5743083
title: Additional file 8: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: The KEGG pathways with significant enrichment of 1273 non-SMGs. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.5743083.v1
title: Additional file 8: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: The KEGG pathways with significant enrichment of 1273 non-SMGs. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.5743089
title: Additional file 9: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of the 19 non-SMGs that were found from 1273 non-SMGs by using VCPA. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5743089.v1
title: Additional file 9: of Mutation status coupled with RNA-sequencing data can efficiently identify important non-significantly mutated genes serving as diagnostic biomarkers of endometrial cancer

description: Summary of the 19 non-SMGs that were found from 1273 non-SMGs by using VCPA. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5743122
title: experiment data and output simulation data

description: experiment data and output simulation data for simulation of wind-blown sand flow around straw checkerboard barriers
DOI: 10.6084/m9.figshare.5743122.v1
title: experiment data and output simulation data

description: experiment data and output simulation data for simulation of wind-blown sand flow around straw checkerboard barriers
DOI: 10.6084/m9.figshare.5745405
title: Additional file 1: of The impact of intravenous methylprednisolone pulses on renal survival in anti-neutrophil cytoplasmic antibody associated vasculitis with severe renal injury patients: a retrospective study

description: The dataset analyzed in the present study. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.5745405.v1
title: Additional file 1: of The impact of intravenous methylprednisolone pulses on renal survival in anti-neutrophil cytoplasmic antibody associated vasculitis with severe renal injury patients: a retrospective study

description: The dataset analyzed in the present study. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.5745417
title: Additional file 2: Table S1. of Cold-responsive miRNAs and their target genes in the wild eggplant species Solanum aculeatissimum

description: New miRNA prediction and sequence analysis. Significant novel miRNAs match different time periods. (XLSX 71Â kb)
DOI: 10.6084/m9.figshare.5745417.v1
title: Additional file 2: Table S1. of Cold-responsive miRNAs and their target genes in the wild eggplant species Solanum aculeatissimum

description: New miRNA prediction and sequence analysis. Significant novel miRNAs match different time periods. (XLSX 71Â kb)