cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/3ac-943-9v5
title: Macrobrachium macrobrachion (Herklots, 1851)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/as0-1wk-43q
title: Stenopus hispidus (Olivier, 1811)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jzh-cmg-0nw
title: Palaemon australis (Dakin, 1915)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qj7-hxg-1m7
title: Glyphocrangon spinicauda A. Milne-Edwards, 1881

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r3v-7xs-1ex
title: Kingsleya latifrons (Randall, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.xbur4m
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Maxillaria pardalina Garay"
 ]
}

 The dataset includes 94 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102832-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/mp3-wxh-0kp
title: Maja squinado (Herbst, 1788)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y1r-40g-lq1
title: Hyas araneus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j33-6yt-r6e
title: Plesionika edwardsii (Brandt, 1851)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g7f-tpj-668
title: Macrophthalmus (Paramareotis) quadratus A. Milne-Edwards, 1873

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zp8-6jg-qam
title: Upogebia kempi Shenoy, 1967

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8k4-289-adr
title: Galathea genkai Miyake & Baba, 1964

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xt0-nqa-l88
title: Penaeus kerathurus (Forskål, 1775)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g4l-tkr-tgz
title: Cherax quinquecarinatus (Gray in Eyre, 1845)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vm6-f7m-d5e
title: Macropodia rostrata (Linnaeus, 1761)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4sq-xwj-793
title: Macrophthalmus (Macrophthalmus) dentatus Stimpson, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4jb-e05-1ff
title: Systellaspis debilis (A. Milne-Edwards, 1881)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lew-9ap-4lr
title: Ashtoret lunaris (Forskål, 1775)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/edz-qna-v3h
title: Macrobrachium pilimanus (De Man, 1879)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vzf-dkq-hcv
title: Euxanthus Dana, 1851

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wps-knv-5jr
title: Camposcia retusa (Latreille, 1829)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zaj-201-rpg
title: Calappa tuberculata (Fabricius, 1787)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b66-4tn-xbm
title: Macrobrachium lucifugum Holthuis, 1974

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sws-6gb-6gx
title: Oplophorus gracilirostris A. Milne-Edwards, 1881

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z8c-5fh-nqk
title: Pisidia longicornis (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ggm-gk0-ke7
title: Lysmata Risso, 1816

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nqc-pdq-z60
title: Polybius holsatus (Fabricius, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1ck-wy8-1wm
title: Raninoides lamarcki A. Milne-Edwards & Bouvier, 1923

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vh4-de0-r47
title: Gelasimus tetragonon (Herbst, 1790)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/30r-phy-10q
title: Achelous spinicarpus Stimpson, 1871

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9fy-qrm-59j
title: Cardus crucifer (Willemoes-Suhm in Thomson, 1873)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f5b-rj3-8v9
title: Diogenes pugilator (Roux, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7hj-0c4-ywb
title: Crangon crangon (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zzx-gdr-w33
title: Palaemon carteri (Gordon, 1935)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0nl-cxr-ehw
title: Eurycarcinus orientalis A. Milne-Edwards, 1867

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/957-wm5-amt
title: Pagurus bernhardus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8gf-hq3-nrc
title: Palaemon carteri (Gordon, 1935)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s5p-z01-1qt
title: Camposcia retusa (Latreille, 1829)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8vf-53b-w43
title: Ocypode cursor (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ld8-j17-wew
title: Raninoides lamarcki A. Milne-Edwards & Bouvier, 1923

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f7c-gd9-qj3
title: Troglocubanus calcis (M. J. Rathbun, 1912)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/14d-13l-c0q
title: Paguristes inconstans McLaughlin & Provenzano, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a5a-j72-zns
title: Minuca vocator (Herbst, 1804)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j9t-1qf-mlr
title: Macrobrachium acherontium Holthuis, 1977

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jy2-s93-pzj
title: Macrobrachium therezieni Holthuis, 1965

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/aln-13n-319
title: Palaemon litoreus (McCulloch, 1909)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zbb-7yd-fzt
title: Pseudomyra mbizi Capart, 1951

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/de2-01x-6v0
title: Pseudograpsus elongatus (A. Milne-Edwards, 1873)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lz7-2tl-tc8
title: Pandalus montagui Leach, 1814

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m4e-kqr-1kj
title: Typhlonida valida (S. I. Smith, 1883)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jjh-qgp-z6v
title: Processa sulcata Hayashi, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wke-tfv-q45
title: Nephropides caribaeus Manning, 1969

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.6wutjh
title: Occurrence Download

description: A dataset containing 7222176 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Apidae"
 ]
}

 The dataset includes 7222176 records from 3398 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102770-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6buwaw
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((170.54615387086108 -45.90773452245382,170.5600011593262 -45.90773452245382,170.5600011593262 -45.89388723398868,170.54615387086108 -45.89388723398868,170.54615387086108 -45.90773452245382))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Therevidae"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246298-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112031849
title: Cuneiform Tablet 1913.14.1532, Spurlock 1913.14.1532

description: [Text Description:] Document regarding a free citizenship ❧ [Text or Publication Number Note:] Spurlock 1913.14.1532; CDLI P421384 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (2.5Y 8/2) -body Dark Gray (N 2.75/ 5.5% R) -discolorations ❧ [Physical Object Note:] 5.9 x 4.4 x 2 cm (54 g)
DOI: 10.15468/dl.ghbx9c
title: Occurrence Download

description: A dataset containing 347 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Congo, Democratic Republic of the",
 "TaxonKey is Planorbidae"
 ]
}

 The dataset includes 347 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065038-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jb93wv
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Halenia caespitosa Gilg"
 ]
}

 The dataset includes 92 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237034-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brag2n
title: Occurrence Download

description: A dataset containing 3161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((32.34375 69.7668,29.10937 69.32453,30.09375 66.97135,29.53125 63.93737,30.23437 61.08379,27.70313 58.24479,31.64063 54.18301,36.42188 50.49106,39.23438 47.44592,37.26562 45.213,42.89063 42.88884,47.25 41.64007,47.67187 46.00001,48.375 50.04162,51.89062 51.46496,58.92187 51.02481,61.03125 51.20138,61.59375 53.76949,70.73437 55.15879,73.26563 54.18301,75.51563 53.7695,85.64063 49.86065,88.59375 49.49668,93.23438 50.49106,97.17187 50.13185,99.14063 51.98758,103.78125 50.66965,107.85938 49.95122,114.75 50.13185,117.98438 49.86065,120.65625 52.50418,124.59375 53.35186,126.98438 51.2894,129.51562 49.31366,131.90625 47.73045,134.15625 47.91929,133.03125 43.80916,137.25 45.70618,144.84375 45.8043,159.46876 49.95122,173.67188 58.9772,182.25 62.80297,190.40625 65.78836,171 70.3424,159.1875 70.76376,140.48438 72.90931,125.71875 73.47848,111.51563 77.65535,101.95313 77.44312,87.89063 75.50596,80.85938 73.55828,71.85938 73.31777,55.6875 69.96044,32.34375 69.7668))",
 "HasGeospatialIssue is false",
 "TaxonKey is Sanguisorba officinalis L."
 ]
}

 The dataset includes 3161 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112561-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112031929
title: Cuneiform Tablet 1913.14.1532, Spurlock 1913.14.1532

description: [Text Description:] Document regarding a free citizenship ❧ [Text or Publication Number Note:] Spurlock 1913.14.1532; CDLI P421384 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (2.5Y 8/2) -body Dark Gray (N 2.75/ 5.5% R) -discolorations ❧ [Physical Object Note:] 5.9 x 4.4 x 2 cm (54 g)
DOI: 10.15468/dl.av223z
title: Occurrence Download

description: A dataset containing 9823813 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "Geometry POLYGON((4.61626 43.2821,8.39186 43.2821,8.39186 46.50422,4.61626 46.50422,4.61626 43.2821))",
 "HasGeospatialIssue is false",
 "TaxonKey is Tracheophyta",
 "Year 1999-2022"
 ]
}

 The dataset includes 9823813 records from 368 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0413170-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffz3nn
title: Occurrence Download

description: A dataset containing 29514 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Populus tremuloides Michx."
 ]
}

 The dataset includes 29514 records from 264 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252027-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8hzpvk
title: Occurrence Download

description: A dataset listing the 688 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-99.607 18.93,-99.267 18.93,-99.267 18.98,-99.607 18.98,-99.607 18.93))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 1991-2022"
 ]
}

 The dataset's 688 records were derived from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002043-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gga9bw
title: Occurrence Download

description: A dataset containing 10538 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dasypus novemcinctus Linnaeus, 1758"
 ]
}

 The dataset includes 10538 records from 221 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112563-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112031967
title: Cuneiform Tablet 1913.14.1532, Spurlock 1913.14.1532

description: [Text Description:] Document regarding a free citizenship ❧ [Text or Publication Number Note:] Spurlock 1913.14.1532; CDLI P421384 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (2.5Y 8/2) -body Dark Gray (N 2.75/ 5.5% R) -discolorations ❧ [Physical Object Note:] 5.9 x 4.4 x 2 cm (54 g)
DOI: 10.15468/dl.6p2asz
title: Occurrence Download

description: A dataset containing 975 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gentiana davidii Franch."
 ]
}

 The dataset includes 975 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0225334-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wftq8a
title: Occurrence Download

description: A dataset containing 292 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nomascus gabriellae (Thomas, 1909)"
 ]
}

 The dataset includes 292 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0243912-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rr8xuv
title: Occurrence Download

description: A dataset containing 619 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alnus trabeculosa Hand.-Mazz."
 ]
}

 The dataset includes 619 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252186-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t4kbq3
title: Occurrence Download

description: A dataset containing 288 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-77.51999039903241 3.1773194110689476,-77.28693518550658 3.1773194110689476,-77.28693518550658 3.4103746245947875,-77.51999039903241 3.4103746245947875,-77.51999039903241 3.1773194110689476))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phyllobates terribilis Myers, Daly & Malkin, 1978"
 ]
}

 The dataset includes 288 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112589-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112031930
title: Cuneiform Tablet 1913.14.1532, Spurlock 1913.14.1532

description: [Text Description:] Document regarding a free citizenship ❧ [Text or Publication Number Note:] Spurlock 1913.14.1532; CDLI P421384 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (2.5Y 8/2) -body Dark Gray (N 2.75/ 5.5% R) -discolorations ❧ [Physical Object Note:] 5.9 x 4.4 x 2 cm (54 g)
DOI: 10.15468/dl.fd95uy
title: Occurrence Download

description: A dataset containing 1114 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aster flaccidus Bunge"
 ]
}

 The dataset includes 1114 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246308-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xd4gc2
title: Occurrence Download

description: A dataset containing 6077 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Podocarpaceae)",
 "HasCoordinate is true",
 "Continent is South America"
 ]
}

 The dataset includes 6077 records from 257 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0225302-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112032892
title: Cuneiform Tablet 1913.14.1672, Spurlock 1913.14.1672

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1672; CDLI P421523 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/1.5) ❧ [Physical Object Note:] 5.9 x 3.9 x 1.9 cm (47 g)
DOI: 10.15468/dl.twrq7a
title: Occurrence Download

description: A dataset containing 65276 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "OccurrenceStatus is Present",
 "TaxonKey is Rana dalmatina Fitzinger, 1838"
 ]
}

 The dataset includes 65276 records from 991 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246311-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n9tudp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bunias cornuta L."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055208-220831081235567/datasets/export for details.
DOI: 10.15468/dl.4jbkxw
title: Occurrence Download

description: A dataset containing 620936 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Betula pendula Roth"
 ]
}

 The dataset includes 620936 records from 1803 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034941-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17312411
title: Molecular Dynamics trajectories for "New Insights into the Structure and Dynamics of the Epigenetic Modifications on DNA"

description: Molecular dynamics simulations on DNA duplexes with sequence:

Strand 1: 3'-CCCGGGXGTCCC-5'Strand 2: 5'-GGGCCC2ApCAGGG-3'

where X=T,C,mC,hmC

The non-standard bases are:

2Ap: 2-aminopurinemC: methyl cytosinehmC: hydroxymethylcitosine

Simulations are conducted in water at room temperature for 100ns using a time step of 1fs (with one test using 2fs, which delivers equivalent results).

The software used to conduct the simulations is Gromacs 2021.4

The upload material includes, for each system:



The initial (equilibrated) configuration with DNA, water and ions

The trajectory (excluding solvent and ions) in xtc format

Topology files (top and itp)

Parameter file (mdp) 


There is one run for each system (with a time step of 1fs), except for X=, where a duplicate run exists with a time step of 2fs.

The trajectories have been analysed in an accepted paper published in RSC Chemical Biology (pending DOI), with title "New Insights into the Structure and Dynamics of the Epigenetic Modifications on DNA"