cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9z042et
title: (LAC-93) Geologic map of the Mare Humorum region of the moon

description: The surface of the moon is heterogeneous. Surface materials are classed on the basis of telescopic observations into units each having a limited range of physical properties such as topography, visible under low-illumination and albedo, the reflectivity under full-Moon illumination. Such units are considered analogous to the rock-stratigraphic formations of terrestrial geology. By application of the principles of superposition and intersection, these rock units are arranged in order of relative age and grouped into time stratigraphic units. Following terrestrial contention, the major time-stratigraphic units are designated systems, and their subdivisions, series; corresponding to these units are periods and epochs of time, respectively (Shoemaker, 1962;Shoemaker and Hackman, 1962). The type localities of most of the systems and series recognized to date are in the vicinity of Mare Imbrium. Correlation of many of the rock stratigraphic units of the Mare Humorum region with the rock stratigraphic units of the Mare Imbrium region is still uncertain.
DOI: 10.5281/zenodo.10076663
title: PICKLE Dataset

description: The PICKLE dataset accompanies the paper In a PICKLE: A gold standard entity and relation corpus for the molecular plant sciences. It is a natural language processing (NLP) dataset of scientific abstracts labeled with gold standard entities and relations. The abstracts were drawn from PubMed searches for the terms "jasmonic acid" and "gibberellic acid". There are 6,245 entities and 2,149 relations across the 250 documents in the brat-formatted (.txt/.ann) documents, and 6,164 entity and 2,094 relation annotations in the jsonl-formatted dataset, as some annotations cannot be aligned to the tokenization used in the jsonl format and are dropped.
DOI: 10.18112/openneuro.ds004469.v1.1.2
title: Temporal Lobe Epilepsy - UNAM
DOI: 10.5066/p90babnk
title: (LAC-60) Geologic map of the Julius Caesar quadrangle of the moon

description: The surface of the moon is heterogeneous. Surface materials are classed on the basis of telescopic observations into units each having a limited range of physical properties such as topography, visible under low-illumination and albedo, the reflectivity under full-Moon illumination. Such units are considered analogous to the rock-stratigraphic formations of terrestrial geology. By application of the principles of superposition and intersection, these rock units are arranged in order of relative age and grouped into time stratigraphic units. Following terrestrial contention, the major time-stratigraphic units are designated systems, and their subdivisions, series; corresponding to these units are periods and epochs of time, respectively (Shoemaker, 1962;Shoemaker and Hackman, 1962). The type localities of most of the systems and series recognized to date are in the vicinity of Mare Imbrium. The assignment of the various mappable rock-stratigraphic units to time-stratigraphic units is somewhat uncertain except in the type areas.
DOI: 10.5517/ccdc.csd.cc2d2dnk
title: CCDC 2206848: Experimental Crystal Structure Determination

description: Related Article: Hongwei Sun, Ke-Zhong Wang, Meng-Ru Yao, Cai-Xia Yu, Yue-Hai Song, Jing Ding, Yan-Li Zhou, Dong Liu, Lei-Lei Liu|2023|Inorg.Chem.Front.|10|6566|doi:10.1039/D3QI01619F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f9hv3
title: CCDC 2243465: Experimental Crystal Structure Determination

description: Related Article: Martin Schnurr, Jonas W. Rackl, Helma Wennemers|2023|J.Am.Chem.Soc.|145|23275|doi:10.1021/jacs.3c08198
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f9hw4
title: CCDC 2243466: Experimental Crystal Structure Determination

description: Related Article: Martin Schnurr, Jonas W. Rackl, Helma Wennemers|2023|J.Am.Chem.Soc.|145|23275|doi:10.1021/jacs.3c08198
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f9hx5
title: CCDC 2243467: Experimental Crystal Structure Determination

description: Related Article: Martin Schnurr, Jonas W. Rackl, Helma Wennemers|2023|J.Am.Chem.Soc.|145|23275|doi:10.1021/jacs.3c08198
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb4b8
title: CCDC 2244069: Experimental Crystal Structure Determination

description: Related Article: YiMing Ren|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb4c9
title: CCDC 2244070: Experimental Crystal Structure Determination

description: Related Article: YiMing Ren|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb4db
title: CCDC 2244071: Experimental Crystal Structure Determination

description: Related Article: YiMing Ren|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fvczn
title: CCDC 2259682: Experimental Crystal Structure Determination

description: Related Article: Alisha Mertens, David van Gerven, Ilka Kunert, Mathias S. Wickleder|2023|Chem.-Eur.J.|29|e202302128|doi:10.1002/chem.202302128
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fvd0q
title: CCDC 2259683: Experimental Crystal Structure Determination

description: Related Article: Alisha Mertens, David van Gerven, Ilka Kunert, Mathias S. Wickleder|2023|Chem.-Eur.J.|29|e202302128|doi:10.1002/chem.202302128
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g0gwv
title: CCDC 2264577: Experimental Crystal Structure Determination

description: Related Article: Mengchu Zhang, Tianyuan Zhang, Sifan Yu, Huang Qiu, Abdulla Yusuf, Xinfang Xu, Yu Qian, Wenhao Hu|2023|Chemical Science|14|11850|doi:10.1039/D3SC03452F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g0gzy
title: CCDC 2264580: Experimental Crystal Structure Determination

description: Related Article: Mengchu Zhang, Tianyuan Zhang, Sifan Yu, Huang Qiu, Abdulla Yusuf, Xinfang Xu, Yu Qian, Wenhao Hu|2023|Chemical Science|14|11850|doi:10.1039/D3SC03452F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g0h66
title: CCDC 2264587: Experimental Crystal Structure Determination

description: Related Article: Mengchu Zhang, Tianyuan Zhang, Sifan Yu, Huang Qiu, Abdulla Yusuf, Xinfang Xu, Yu Qian, Wenhao Hu|2023|Chemical Science|14|11850|doi:10.1039/D3SC03452F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1hlm
title: CCDC 2265560: Experimental Crystal Structure Determination

description: Related Article: JunGang Deng, YouRu Wu, AiLi Li, WeiPing Pan, LiXia Hou, DaQi Wu, ZhenLei Zhang, Feng Yang, Yi Gou|2023|Inorg.Chem.Front.|10|6526|doi:10.1039/D3QI01777J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g1hnp
title: CCDC 2265562: Experimental Crystal Structure Determination

description: Related Article: JunGang Deng, YouRu Wu, AiLi Li, WeiPing Pan, LiXia Hou, DaQi Wu, ZhenLei Zhang, Feng Yang, Yi Gou|2023|Inorg.Chem.Front.|10|6526|doi:10.1039/D3QI01777J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10070727
title: UShER performance statistics, SARS-CoV-2 daily builds 2021-2023

description: For each day from 2021-01-07 through 2023-08-01 on which the daily build update of the UShER tree of SARS-CoV-2 genomes completed, the number of new sequences added to the tree, the number of sequences in the updated tree, the number of parallel usher jobs (original usher through 2022-04-27, usher-sampled starting 2022-04-29), the number of CPU cores per usher job, and approximate runtime of the usher batch in hours are listed.  The number of sequences in the updated tree is "n/a" for most dates prior to 2021-03-11 because before that point, daily updates were for the public-sequence-only tree and the comprehensive GISAID and public sequence tree was updated only occasionally.  On and after 2021-03-11, the comprehensive tree and public tree were updated daily.  The runtime figures are approximate because they are calculated by subtracting the file modification date of the VCF input to usher from the file modification date of the MAT output of usher.  On most days, that was a good proxy for usher runtime, but occasionally there was a crash that required debugging and/or restart, and the "runtime" includes those delays.
DOI: 10.5281/zenodo.10070728
title: UShER performance statistics, SARS-CoV-2 daily builds 2021-2023

description: For each day from 2021-01-07 through 2023-08-01 on which the daily build update of the UShER tree of SARS-CoV-2 genomes completed, the number of new sequences added to the tree, the number of sequences in the updated tree, the number of parallel usher jobs (original usher through 2022-04-27, usher-sampled starting 2022-04-29), the number of CPU cores per usher job, and approximate runtime of the usher batch in hours are listed.  The number of sequences in the updated tree is "n/a" for most dates prior to 2021-03-11 because before that point, daily updates were for the public-sequence-only tree and the comprehensive GISAID and public sequence tree was updated only occasionally.  On and after 2021-03-11, the comprehensive tree and public tree were updated daily.  The runtime figures are approximate because they are calculated by subtracting the file modification date of the VCF input to usher from the file modification date of the MAT output of usher.  On most days, that was a good proxy for usher runtime, but occasionally there was a crash that required debugging and/or restart, and the "runtime" includes those delays.
DOI: 10.5281/zenodo.10080683
title: BASE-9 binarity and stellar masses from Gaia DR3, 2MASS, and Pan-STARRS data for six open clusters: NGC 2168, NGC 7789, NGC 6819, NGC 2682, NGC 188, NGC 6791

description: Data sets as described in "Goodbye to Chi-by-Eye: A Bayesian Analysis of Photometric Binaries in Six Open Clusters", Childs et al. 2023 https://ui.adsabs.harvard.edu/abs/2023arXiv230816282C/abstract
DOI: 10.5281/zenodo.10080738
title: Global Transcontinental Power Pool for Low-carbon Electricity

description: The data are used for the GridPath 10.0.0.
Put the data folder under the db folder in GridPath.
DOI: 10.5281/zenodo.7948943
title: FunMap input expression data matrices

description: This gzipped tar file contains mRNA and protein expression matrices for 11 different cancer types. Five of them contain both tumor and normal samples, while six of them contain only tumor samples.
DOI: 10.5281/zenodo.7948944
title: FunMap input expression data matrices

description: This gzipped tar file contains mRNA and protein expression matrices for 11 different cancer types. Five of them contain both tumor and normal samples, while six of them contain only tumor samples.
DOI: 10.5281/zenodo.10080737
title: Global Transcontinental Power Pool for Low-carbon Electricity

description: The data are used for the GridPath 10.0.0.
Put the data folder under the db folder in GridPath.
DOI: 10.5281/zenodo.10080778
title: WRF Model namelist

description: This is WRF model's namelist for the article "Characteristics and variability of precipitation across different sectors of an extra-tropical cyclone – a case study over the high-latitudes of the Southern Ocean" accepted for publication in Journal of Geophysical Research: Atmospheres (11/2023) by SCH Truong, ST Siems, P May, Y Huang, E Vignon, A Gevorgyan
DOI: 10.5281/zenodo.10080764
title: FunMap prediction scores for all gene pairs

description: This gzipped TSV (Tab-Separated Values) file contains  prediction scores generated by a predictive model trained on different types of feature set. The file structure is as follows:
Column 1 (Gene Pair): This column represents pairs of gene ids. Each entry in this column consists of two gene ids, potentially denoting associations between genes.
Column 2 (RNA Data Prediction): The values in this column represent prediction scores generated by the model using RNA features as input. 
Column 3 (Protein Data Prediction): This column contains prediction scores produced by the model when trained on protein features. 
Column 4 (Combined RNA and Protein Data Prediction): The values in this column represent prediction scores resulting from the model trained with both RNA and protein features.
DOI: 10.5281/zenodo.10080763
title: FunMap prediction scores for all gene pairs

description: This gzipped TSV (Tab-Separated Values) file contains  prediction scores generated by a predictive model trained on different types of feature set. The file structure is as follows:
Column 1 (Gene Pair): This column represents pairs of gene ids. Each entry in this column consists of two gene ids, potentially denoting associations between genes.
Column 2 (RNA Data Prediction): The values in this column represent prediction scores generated by the model using RNA features as input. 
Column 3 (Protein Data Prediction): This column contains prediction scores produced by the model when trained on protein features. 
Column 4 (Combined RNA and Protein Data Prediction): The values in this column represent prediction scores resulting from the model trained with both RNA and protein features.
DOI: 10.5281/zenodo.10080777
title: WRF Model namelist

description: This is WRF model's namelist for the article "Characteristics and variability of precipitation across different sectors of an extra-tropical cyclone – a case study over the high-latitudes of the Southern Ocean" accepted for publication in Journal of Geophysical Research: Atmospheres (11/2023) by SCH Truong, ST Siems, P May, Y Huang, E Vignon, A Gevorgyan
DOI: 10.5281/zenodo.10080470
title: Antibody panel used for multiplexed antibody-based imaging of Human Pancreas Analysis Program (HPAP) samples by CODEX

description: This data file details antibodies applied to human pancreas tissue samples from the Human Pancreas Analysis Program (HPAP; RRID:SCR_016202) of the Human Islet Research Network (HIRN; RRID:SCR_014393). Images will be uploaded for interactive analysis on Pancreatlas (RRID:SCR_018567) and made available for download via PANC-DB. Workflow is documented on protocols.io: dx.doi.org/10.17504/protocols.io.36wgq7dryvk5/v1.
Table format adapted from Radtke AJ, Quardokus EM, Saunders DC (2022), SOP: Construction of Organ Mapping Antibody Panels for Multiplexed Antibody-Based Imaging of Human Tissues. See also: Saunders D; Reihsmann R. OMAP-13: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Pancreas with CODEX, v1.0.
DOI: 10.6084/m9.figshare.24274165.v1
title: DesignB_BB.zar

description: Blackbox of the optical design for the developed device
DOI: 10.5281/zenodo.10080471
title: Antibody panel used for multiplexed antibody-based imaging of Human Pancreas Analysis Program (HPAP) samples by CODEX

description: This data file details antibodies applied to human pancreas tissue samples from the Human Pancreas Analysis Program (HPAP; RRID:SCR_016202) of the Human Islet Research Network (HIRN; RRID:SCR_014393). Images will be uploaded for interactive analysis on Pancreatlas (RRID:SCR_018567) and made available for download via PANC-DB. Workflow is documented on protocols.io: dx.doi.org/10.17504/protocols.io.36wgq7dryvk5/v1.
Table format adapted from Radtke AJ, Quardokus EM, Saunders DC (2022), SOP: Construction of Organ Mapping Antibody Panels for Multiplexed Antibody-Based Imaging of Human Tissues. See also: Saunders D; Reihsmann R. OMAP-13: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Pancreas with CODEX, v1.0.
DOI: 10.5281/zenodo.10080682
title: BASE-9 binarity and stellar masses from Gaia DR3, 2MASS, and Pan-STARRS data for six open clusters: NGC 2168, NGC 7789, NGC 6819, NGC 2682, NGC 188, NGC 6791

description: Data sets as described in "Goodbye to Chi-by-Eye: A Bayesian Analysis of Photometric Binaries in Six Open Clusters", Childs et al. 2023 https://ui.adsabs.harvard.edu/abs/2023arXiv230816282C/abstract
DOI: 10.5281/zenodo.10080762
title: BASE-9 binarity and stellar masses from Gaia DR3, 2MASS, and Pan-STARRS data for six open clusters: NGC 2168, NGC 7789, NGC 6819, NGC 2682, NGC 188, NGC 6791

description: Data sets as described in "Goodbye to Chi-by-Eye: A Bayesian Analysis of Photometric Binaries in Six Open Clusters", Childs et al. 2023 https://ui.adsabs.harvard.edu/abs/2023arXiv230816282C/abstract
DOI: 10.5281/zenodo.10037822
title: Data associated with "Robust Structured Illumination Microscopy with Bayesian Noise Control"

description: Experimental and synthetic data saved in tiff and/or zarr formats and SIM reconstruction scripts written in Python (Wiener and FISTA-SIM0. These also include estimated SIM patterns which are needed for B-SIM

Synthetic data consisting of variably spaced line pairs. Found in 2023_10_02_synthetic_line_pairs.zip
Experimental data. Fluorescence images of one of the variably spaced line pair patterns on an ArgoSIM calibration slide. Found in 2023_08_02_folder=002_argosim_slide.zip
Experimental data. MitoTracker Red labelled mitochondria in live HeLa cells. Found in 2023_08_07_folder=011_mitos_live_hela.zip
Camera calibration maps, including gain, variance, and offset. Found in camera_calibration.zip
DOI: 10.5066/p9wbf3vk
title: (LAC-58) Geologic map of the Copernicus quadrangle of the moon

description: The surface of the Moon is heterogeneous both on a regional and a fine scale. The geologic mapping of this surface is similar in principle to the geologic mapping of the Earth's surface and depends on the discrimination of similarities and differences between materials and features at different points on the surface. Differences from area to area in characteristic topographic forms and in such physical properties as albedo indicate that the areas are underlain by materials of different nature and have formed under different processes. The units shown on the map are analogous to stratigraphic units adopted for mapping terrestrial geology in that they are bodies of rock with a limited range of properties and age and are of relatively simple geometric form. It is inferred that the material of the individual rock units mapped has formed under a limited set of conditions. The relative ages of some of the map units can be determined where they overlap. For example, the rays around Copernicus overlap the craters Eratosthenes and Reinhold and the rim materials of Copernicus, Eratosthenes, and Reinhold overlap the smooth materials of the maria.
DOI: 10.25345/c53b5wk1n
title: MassIVE MSV000093329 - GNPS - 82 actinomycetes cultured in 2 media
title: Bacterial extracts from 82 actinomycetes cultured in two media conditions. Untargeted LC-MS/MS acquisition performed in positive ion mode.