cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7936713
title: Dataset for paper "Equatorial Pacific sea-air CO2 exchange modulated by upper ocean circulation during the last deglaciation" submittted to Nature Communications E&E

description: Data of the <em>p</em>CO<sub>2</sub> and ∆<em>p</em>CO<sub>2_sw-atm</sub> from <em>G. ruber</em> 𝛿<sup>11</sup>B, 𝛿<sup>11</sup>B of <em>G. sacculifer</em>, 𝛿<sup>18</sup>O of <em>G. ruber</em> and <em>P. obliquiloculata</em>, ∆𝛿<sup>18</sup>O<sub>P-G</sub>, bulk 𝛿<sup>15</sup>N in core MD10-3340 (0º31.0’S, 128º43.5’E, water depth 1094 m), and upper Ocean Heat Content (OHC) in the Western Equatorial Pacific (WEP).
DOI: 10.5281/zenodo.7936712
title: Dataset for paper "Equatorial Pacific sea-air CO2 exchange modulated by upper ocean circulation during the last deglaciation" submittted to Geophysical Research Letters

description: Data of the <em>p</em>CO<sub>2</sub> and ∆<em>p</em>CO<sub>2_sw-atm</sub> from <em>G. ruber</em> 𝛿<sup>11</sup>B, 𝛿<sup>11</sup>B of <em>G. sacculifer</em>, 𝛿<sup>18</sup>O of <em>G. ruber</em> and <em>P. obliquiloculata</em>, ∆𝛿<sup>18</sup>O<sub>P-G</sub>, bulk 𝛿<sup>15</sup>N in core MD10-3340 (0º31.0’S, 128º43.5’E, water depth 1094 m), and upper Ocean Heat Content (OHC) in the Western Equatorial Pacific (WEP).
DOI: 10.25345/c53f4kz5f
title: MassIVE MSV000092917 - Jorge Gomez Deza_Claire Le Pichon_16LFQ_Human
title: Mass spectrometry-based label-free quantitation of 16 samples
DOI: 10.6084/m9.figshare.24171981
title: cif.rar

description: Crystal
DOI: 10.6084/m9.figshare.24171981.v1
title: cif.rar

description: Crystal
DOI: 10.6084/m9.figshare.21351487
title: Changing distributions of the cosmopolitan mosquito species <i>Culex quinquefasciatus</i> Say and endemic <i>Cx. pervigilans</i> Bergroth (Diptera: Culicidae) in New Zealand

description: New Zealand has 13 endemic mosquito species, which are predominantly bird-biters, exhibiting low levels of vector competence, and are adapted to their native ecosystems. Anthropogenic land-use change are well-suited to domesticated exotic species that have already established here. While some endemic species, such as <i>Culex pervigilans,</i> can also be found vutilising such environments, there are indications of population decline and displacement. The cosmopolitan <i>Cx. quinquefasciatus</i> has been established in New Zealand for more than 180 years, and was believed to be confined to the warmer, northern regions. However, biosecurity records of obtained specimens collected by the National Mosquito Surveillance Program, at various points of entry (POE) for goods and international travel, suggest an expansion of this range. Changes in the distributions of <i>Cx. quinquefasciatus</i> and <i>Cx. pervigilans</i> over the last fifteen years in New Zealand, are evaluated herein, with the conclusion that <i>Cx. quinquefasciatus</i> is increasing both in distribution and population density over time, and should be considered an invasive species. Evidence of a southward spread is likely a result of anthropogenic environmental changes particularly favourable to <i>Cx. quinquefasciatus.</i> A trend of considerable ecological and public health importance. Similarly clear effects on urban <i>Cx. pervigilans</i> populations were not observed.
DOI: 10.25958/7bwg-kn79
title: Accuracy of spectral indices assessing fire severity utilizing maximum and minimum pixel values

description: This data set contains all Spectral Indices created using Google Earth Engine through Google Collaborate. 16 Spectral Indices were created that utilise different image collection and pixel value parameters to map the burn severity of the 2021 Wooroloo Bushfire.
DOI: 10.18112/openneuro.ds004603.v1.1.0
title: Visual Attribute-Specific Contextual Trajectory Paradigm
DOI: 10.25919/jpvh-fn18
title: Field Condition NIR Spectral Library of the CSIRO Boorowa Agricultural Research Station Long Term Trial

description: This is a collection of soil analytical values, GPS locations, and field condition near infrared (NIR) spectra collected on the CSIRO Boorowa Agricultural Research Station (BARS) long term trial (LTT) immediately prior to differentiation of land use. (Pre-sowing 2022). The first row is a header of column names. Columns 1:8 represent the sampling metadata of the soil samples, including the Sample ID, core number and coordinates (in WGS 84), depth bounds, sampling date and date of returned analysis values. Rows 2:627 contain samples which were selected for laboratory analysis, and Columns 9:19 contain the reported values from the laboratory analysis. Column names in 9:19 are prefixed by the Rayment & Lyons chemical method for the soil analyte, and are suffixed by the units. Columns 20 and 21 are Sensing metadata for the NIR scans, reporting The Serial number of the Device used to scan that sub sample, and the timestamp of the specific scan. Column 22 is a dummy column to delineate the start of the reported reflectance wavelengths for each scan, and all subsequent columns represent backgrounded reflectance at a specified wavelength in nm.
DOI: 10.25550/3b-m1x6
title: single cell and microiscoppy of PN9.5 mouse

description: In this dataset....
DOI: 10.25550/38-3mnc
title: Comprehensive Analysis of Epigenetic Regulatory Network in the Mouse Incisor

description: Epigenetic regulation plays a crucial role in controlling the expression of stage- and tissue-specific genes during development and tissue homeostasis. As a core subunit of the BAF complex, ARID1B acts as a DNA-binding protein that regulates chromatin accessibility. However, the role of ARID1B as an epigenetic regulator in maintaining adult stem cell homeostasis remains largely unexplored. In this study, we used the continuously growing mouse incisor as a model to investigate the role of ARID1B in regulating mesenchymal stem cell (MSC) homeostasis and cell fate commitment. Our findings demonstrate that loss of ARID1B within the Gli1+ MSC lineage impairs mouse incisor growth and tissue homeostasis. Through comprehensive analysis of single-cell (sc)RNA-seq, scATAC-seq, and bulk RNA-seq data, we identified BCL11B as a direct downstream gene of ARID1B. Our study highlights the critical roles of ARID1B in maintaining MSC homeostasis and its intricate interaction with non-Smad TGF-β signaling, providing valuable insights into the epigenetic regulatory network and its potential implications for stem cell regulation in the future.
DOI: 10.25550/38-qs98
title: Six1 related genes in otic development

description: Bulk RNA-sequencing of total RNA from E10.5 wild-type, Six1+/- and Six1-/- mouse otic vesicles to identify novel Six1-related genes during otic development.
DOI: 10.5281/zenodo.8362643
title: Observed isotopic values of precipitation and vapor from Kochi during 2018 and 2019

description: d <sup>18</sup>o and dD of precipitation and vapor from kochi during 2018 and 2019
DOI: 10.5281/zenodo.8362642
title: Observed isotopic values of precipitation and vapor from Kochi during 2018 and 2019

description: d <sup>18</sup>o and dD of precipitation and vapor from kochi during 2018 and 2019
DOI: 10.5281/zenodo.8365250
title: Dataset of "Frequency Chirping of Electromagnetic Ion Cyclotron Waves in Earth's Magnetosphere"

description: Dataset of "Frequency Chirping of Electromagnetic Ion Cyclotron Waves in Earth's Magnetosphere", including the electromagnetic fields observed by Cluster, THEMIS or Van Allen Probes satellites and their definitive positions used to calculate EMIC wave chirping rates in the paper. Each folder in the dataset contains the entire data of one in the 15 cases of EMIC wave frequency chirping.
DOI: 10.5517/ccdc.csd.cc28ncs3
title: CCDC 2104955: Experimental Crystal Structure Determination

description: Related Article: Yuan-He Li, Su-Lei Zhang, Yong Lu, Bo Xiao, Tian-Yu Sun, Qian-Qian Xu, Jia-Hua Chen, Zhen Yang|2023|Angew.Chem.,Int.Ed.|62|e202303075|doi:10.1002/anie.202303075
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.24172296
title: Data_Penelitian_2023.csv

description: Mathematics education research data for Calculus courses
DOI: 10.6084/m9.figshare.23996814.v1
title: Shared data_kuer's reception

description: It contained a translated version of the questionnaire the raw data (e.g., data collected from the questionnaire, coding information, word clusters).
DOI: 10.5281/zenodo.8365306
title: Mapping literature reviews on coral health: A review map, critical appraisal, and bibliometric analysis - Data and Code

description: Data, code, and supplementary materials for "Mapping literature reviews on coral health: A review map, critical appraisal, and bibliometric analysis" by Burke et al., published in Ecological Solutions and Evidence.
DOI: 10.5281/zenodo.8365305
title: Mapping literature reviews on coral health: A review map, critical appraisal, and bibliometric analysis - Data and Code

description: Data, code, and supplementary materials for "Mapping literature reviews on coral health: A review map, critical appraisal, and bibliometric analysis" by Burke et al., published in Ecological Solutions and Evidence.
DOI: 10.6084/m9.figshare.24173025
title: Supplementary Material for: 'Brait-Fahn-Schwartz Disease: A Unique Co-occurrence of Parkinson's Disease and Amyotrophic Lateral Sclerosis.'

description: Background: The Parkinson's disease-amyotrophic lateral sclerosis complex typically manifests as levodopa-responsive parkinsonism followed by ALS. It is extremely rare for PD and ALS to coexist without other neurological disorders. Named after the scientists who first described this overlap of two neurodegenerative conditions is referred as Brait-Fahn-Schwartz disease. The most notable characteristics that set this disorder apart from Guam parkinsonism-dementia complex, are the positive and persistent response to dopaminergic drug therapy and the order in which progressive parkinsonian symptoms and signs appear before the onset of ALS. Given its variable presentations, increasing rarity and the lack of any diagnostic test, it poses a diagnostic challenge. Case presentation: We report a rare case of a 55 years old Pakistani male, who presented to us with progressive quadriparesis, which was spastic in nature in lower limbs and flaccid in upper limbs, along with preceding cardinal features of idiopathic Parkinson’s disease. We arrived at our diagnosis after rigorous history taking and physical examination with supportive aid of radiological imaging and electromyography. On presentation, spasticity had disabled the patient to the extent of requiring one-person support to walk. However, with only 2 weeks on our treatment plan, targeting both PD and ALS, he could walk unaided. Since there is currently no cure available for either PD or ALS, all available treatment focuses on improving quality of life, which we achieved in our patient. Conclusion: This case is unique in being the first incidence of PD-ALS complex in a novel geographic region such as Pakistan where the genetic testing and cost constraints limit the diagnosis of rare disorders. The coexistence of extrapyramidal symptoms and pyramidal symptoms is uncommon. In such situations, physicians may overlook one group of symptoms, potentially leading to a misdiagnosis. This case highlights the value of a thorough physical examination, electrodiagnostic studies and suggest the association of PD and ALS. This case demonstrates the significance of understanding when PD symptoms start to appear in patients with ALS and the need to start dopaminergic therapy in those who had Parkinsonism features before ALS to alleviate the suffering of an individual, and enhances quality of life.
DOI: 10.6084/m9.figshare.24173025.v1
title: Supplementary Material for: 'Brait-Fahn-Schwartz Disease: A Unique Co-occurrence of Parkinson's Disease and Amyotrophic Lateral Sclerosis.'

description: Background: The Parkinson's disease-amyotrophic lateral sclerosis complex typically manifests as levodopa-responsive parkinsonism followed by ALS. It is extremely rare for PD and ALS to coexist without other neurological disorders. Named after the scientists who first described this overlap of two neurodegenerative conditions is referred as Brait-Fahn-Schwartz disease. The most notable characteristics that set this disorder apart from Guam parkinsonism-dementia complex, are the positive and persistent response to dopaminergic drug therapy and the order in which progressive parkinsonian symptoms and signs appear before the onset of ALS. Given its variable presentations, increasing rarity and the lack of any diagnostic test, it poses a diagnostic challenge. Case presentation: We report a rare case of a 55 years old Pakistani male, who presented to us with progressive quadriparesis, which was spastic in nature in lower limbs and flaccid in upper limbs, along with preceding cardinal features of idiopathic Parkinson’s disease. We arrived at our diagnosis after rigorous history taking and physical examination with supportive aid of radiological imaging and electromyography. On presentation, spasticity had disabled the patient to the extent of requiring one-person support to walk. However, with only 2 weeks on our treatment plan, targeting both PD and ALS, he could walk unaided. Since there is currently no cure available for either PD or ALS, all available treatment focuses on improving quality of life, which we achieved in our patient. Conclusion: This case is unique in being the first incidence of PD-ALS complex in a novel geographic region such as Pakistan where the genetic testing and cost constraints limit the diagnosis of rare disorders. The coexistence of extrapyramidal symptoms and pyramidal symptoms is uncommon. In such situations, physicians may overlook one group of symptoms, potentially leading to a misdiagnosis. This case highlights the value of a thorough physical examination, electrodiagnostic studies and suggest the association of PD and ALS. This case demonstrates the significance of understanding when PD symptoms start to appear in patients with ALS and the need to start dopaminergic therapy in those who had Parkinsonism features before ALS to alleviate the suffering of an individual, and enhances quality of life.
DOI: 10.6084/m9.figshare.23626407
title: PC9 cell line scRNAseq datasets

description: In GEO NCBI repository are available single cell data on PC9 untreated lung cancer cell line done in two different labs, using both 10XGenomics and Drop-seq platforms and produced from in vitro culture or xenograph experiments.set1: GSM3972657 PC9 in vitro dropseq Chicago (2500 cells)set2: SM4494347 PC9 in vitro dropseq Chicago (12000 cells)set3: GSM3972651 PC9 in vitro 10XGenomics Chicago (12649 cells)set4: GSM6106787 PC9 in vitro 10XGenomics Berkeley (413 cells)set5: GSM4869650 PC9 xenograft dropseq Chicago (29983 cells)set6: GSM3972674 PC9 and U937 in vitro dropseq Chicago (2634 cells)set7 BE1 GSE243665 PC9 in vitro 10XGenomics Turin (4492 cells)These datasets, because of their differences, i.e. platforms, growth, labs, represent an ideal instrument to benchmark batch removal methods as well as integration methods. The seven sets are available as datasets with the same gene annotation (ensemblID:Symbol). Each set has the cellID with the extension _s(1:5) and set6 has two extensions _s6PC9 and _s6U937, set7 has extension _PC9.
DOI: 10.34740/kaggle/dsv/6508962
title: Panasonic Employee Reviews Dataset
DOI: 10.6084/m9.figshare.24162801
title: Tourism policies reloaded: Towards a comprehensive framework.Interactive Tourism Policies Workbook

description: This file is an addition to the following paper:Joppe, M., Laesser, C., & Mann, S. (submitted). 5. Tourism policies reloaded: Towards a comprehensive framework, Pforr, C., Pillmayer, M., Joppe, M., Scherle, N, & Pechlaner, H. (Eds.) <i>Tourism Policy-Making in the Context of Contested Wicked Problems, </i>Emerald Publishing.
DOI: 10.6084/m9.figshare.24162801.v1
title: <b>Tourism policies reloaded: Towards a comprehensive framework</b>: Interactive Tourism Policies Workbook

description: This file is an addition to the following paper:Joppe, M., Laesser, C., & Mann, S. (submitted). 5. Tourism policies reloaded: Towards a comprehensive framework, Pforr, C., Pillmayer, M., Joppe, M., Scherle, N, & Pechlaner, H. (Eds.) <i>Tourism Policy-Making in the Context of Contested Wicked Problems, </i>Emerald Publishing.
DOI: 10.6084/m9.figshare.24162801.v2
title: Tourism policies reloaded: Towards a comprehensive framework.Interactive Tourism Policies Workbook

description: This file is an addition to the following paper:Joppe, M., Laesser, C., & Mann, S. (submitted). 5. Tourism policies reloaded: Towards a comprehensive framework, Pforr, C., Pillmayer, M., Joppe, M., Scherle, N, & Pechlaner, H. (Eds.) <i>Tourism Policy-Making in the Context of Contested Wicked Problems, </i>Emerald Publishing.
DOI: 10.34740/kaggle/dsv/6509038
title: Samsung Electronics Reviews Dataset
DOI: 10.34740/kaggle/dsv/6509071
title: Capgemini Employee Reviews Dataset
DOI: 10.21335/nmdc-911461071
title: Flow cytometry measurements (abundance of virus, bacteria and small protists (primarily <20μm)) during Nansen Legacy cruise 2021710 (from August 23rd to September 25th in 2021) in the Artic Ocean

description: This dataset is a collection of flow cytometry measurements (abundance of virus, bacteria and small protists (primarily <20μm)) taken as part of the Nansen Legacy project (www.arvenetternansen.com), as part of the '2021 Joint Cruise 2-2' cruise (2021710; (from August 23rd to September 25th in 2021). The data are collected from a CTD-rosette with Niskin bottles from stations located in the Arctic Ocean.
DOI: 10.15151/esrf-es-1299176878
title: IBS BAG

description: The IBS BAG includes in this proposal IBS teams and external groups from CEA-Cadarache (St Paul lez Durance) and IRBA (Brétigny-sur-Orge). We study structure-function relationships of proteins emphasizing in human health, biotechnology and methodology. Most of the projects are a continuation of the MX-2398 proposal and can be grouped into different topics as follows: host-pathogen interaction, new drug targets, fundamental cellular mechanisms, membrane proteins, biotechnological applications and methodology. Some of these projects use integrative approaches (X-ray crystallography, SAXS, NMR (and cryo-EM), together with other biophysical studies) with the aim to fully understand the complexity of the biological macromolecular systems on study.
DOI: 10.15151/esrf-es-1308545237
title: BAG Montpellier

description: The BAG of Montpellier gathers researchers from distinct institutes (CBS, IGF, IRIM and LPHI) affiliated to the INSERM, the CNRS and the university of Montpellier. The CBS is a node of the national infrastructure FRISBI. In this context, it is developping new methodologies for efficient ligand screening by X-ray diffraction. It is also involved in solving the structure of novel therapeutic targets to develop novel drug candidates. The IGF is involved in characterizing membrane proteins (mainly GPCRs) in order to better understand their functioning for therapeutic application. The IRIM and LPHI are focusing on several therapeutic targets related to infectious diseases in order to identify and develop novel inhibitors. CBS and IGF use SAXS to unravel the organization and behavior of various macromolecular systems in solution. Finally, we also use cryo-electron microscopy to study some macromolecular assemblies.
DOI: 10.15151/esrf-es-1308546518
title: Structural studies of proteins and protein complexes involved in regulation, recognition and transport

description: Our BAG is focussed around a large group of experimenters who work on a diverse range of biological and physical problems. Whilst this makes it difficult to write an overall summary of the science it makes it easy to share the beamtime very efficiently and ensure that all time granted is used to the fullest extent. The interests of the groups involved in the BAG include repair of DNA damage, chromatin assembly and organisation, metallo-protein chemistry, membrane transporter proteins, novel protein antibiotics, cell adhesion and the study of parisitic diseases with a view to vaccine development.
DOI: 10.15151/esrf-es-1308542678
title: Exploring the dynamic nature of OCP crystals by combined use of diffraction and in crystallo spectrophotometry at room-temperature.

description: The photoactive Orange Carotenoid Protein (OCP) is a reversible photoswitch which serves photoprotection in cyanobacteria (Wilson et al. 2006). OCP is functionalized by a keto-carotenoid pigment which, in the presence of a blue-green photon, is able to induce conformational changes resulting in a photoactivated state capable of quenching an excess of absorbed light energy. Preliminary experiments offered first evidence that dehydration of OCP crystals lead to the trapping of a pre-activated state. The very goal of our experiment is to verify this hypothesis by simultaneous collection of diffraction and spectroscopic data from crystals at room-temperature and at varied levels of humidity.
DOI: 10.15151/esrf-es-1308372789
title: Self-assembly of colloidal polyelectrolyte-surfactant complexes: from bulk to thin film

description: We propose an in situ small-angle X-ray scattering study to study the spontaneous self-assembly of colloidal polymer-surfactant complexes and their diverse phase behaviour. Our final goal is to use spontaneous self-assembly in these complex systems to provide a long-lasting antimicrobial property to surfaces, without the need for constant sanitization. The design of this system is based on a concept of fine-tuning solution structure, allowing precise control over coating morphology, which enables creation of long-lasting antimicrobial protections on surfaces. In order to achieve this, we need to main structural features of self-assembled aggregates, which are transferred onto the surface largely undisturbed, as demonstrated by previous GISAXS experiments.
DOI: 10.15151/esrf-es-1315705844
title: Understanding the crystal structure of metal-organic framework thin film and the structural correlation with the underlying substrates

description: Metal-organic frameworks (MOFs) are nanoporous materials that are composed of metal ions connected with organic ligands leading to an ordered pore topology. Recently, we have developed a novel technique utilizing epitaxial substrates which promote in-plane nucleation and growth of 2D zeolitic imidazolate framework (ZIF) and succeeded in solving the structure of our 2DZIF film, which is different from its known 3D analog. We have extended the crystallization strategy to other promising MOFs (UiO-66-NH2, ZIF-7, CALF-20, MIL-53, MIL-101). Owing to the fact that MOFs are not stable under electron beam, we could not get the comprehensive understanding of 2D MOF structure including the in-plane and out-plane information. In particular, we are very interested in solving their crystal structure to understand the similarities and differences of the structure of 2D films and their 3D analog, and the correlation between orientation of 2D films and their underlying substrates.
DOI: 10.5281/zenodo.8365486
title: Scientific information retrieval systems

description: Analysis of four scientific information retrieval systems: Google Scholar, Semantic Scholar, Internet Archive Scholar and BASE