cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25810708
title: CA-3B

description: CA-3B investigates the impact of <i>Bifidobacterium</i> <i>bifidum</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample CA-3B:<br>C: Denotes the strain ST-2 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is <i>Bifidobacterium</i> <i>bifidum</i>.
DOI: 10.6084/m9.figshare.25810708.v1
title: CA-3B

description: CA-3B investigates the impact of <i>Bifidobacterium</i> <i>bifidum</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample CA-3B:<br>C: Denotes the strain ST-2 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is <i>Bifidobacterium</i> <i>bifidum</i>.
DOI: 10.6084/m9.figshare.25810711
title: DK-3P

description: DK-3P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DK-3P:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>3: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei
DOI: 10.6084/m9.figshare.25810711.v1
title: DK-3P

description: DK-3P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DK-3P:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>3: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei
DOI: 10.6084/m9.figshare.25810714
title: FK-1P

description: FK-1P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FK-1P:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment<br>1: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810714.v1
title: FK-1P

description: FK-1P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FK-1P:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment<br>1: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810717.v1
title: AK-1Y

description: AK-1Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-1Y:<br>A: Denotes the Control group.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>1: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.60712/si-id158544.1
title: StrainInfo SI-ID 158544.1

description: StrainInfo dataset 158544 about a strain of Penicillium bovifimosum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id158545.1
title: StrainInfo SI-ID 158545.1

description: StrainInfo dataset 158545 about a strain of Cladophialophora boppii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25810717
title: AK-1Y

description: AK-1Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-1Y:<br>A: Denotes the Control group.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>1: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810720
title: AC-2P

description: AC-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AC-2P:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810720.v1
title: AC-2P

description: AC-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AC-2P:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810723
title: AA-2P

description: AA-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-2P:<br>A: Denotes the control group.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810723.v1
title: AA-2P

description: AA-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-2P:<br>A: Denotes the control group.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810726
title: FA-6Y

description: FA-6Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FA-6Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>6: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810726.v1
title: FA-6Y

description: FA-6Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FA-6Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>6: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810729
title: DA-2Y

description: DA-2Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DA-2Y:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.60712/si-id158642.1
title: StrainInfo SI-ID 158642.1

description: StrainInfo dataset 158642 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25810522
title: FK-6Y

description: FK-6Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FK-6Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>6: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810522.v1
title: FK-6Y

description: FK-6Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FK-6Y:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>6: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810525
title: CK-4P

description: CK-4P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample CK-4P:<br>C: Denotes the strain ST-2 of Clostridioides difficile.<br>K: Represents timepoint 2, indicating sampling after treatment.<br>4: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810525.v1
title: CK-4P

description: CK-4P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample CK-4P:<br>C: Denotes the strain ST-2 of Clostridioides difficile.<br>K: Represents timepoint 2, indicating sampling after treatment.<br>4: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25810528
title: DK-2Y

description: DK-2Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DK-2Y:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>2: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810729.v1
title: DA-2Y

description: DA-2Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DA-2Y:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.60712/si-id158643.1
title: StrainInfo SI-ID 158643.1

description: StrainInfo dataset 158643 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25810528.v1
title: DK-2Y

description: DK-2Y investigates the impact of Lactobacillus <i>acidophilus</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DK-2Y:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>2: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus <i>acidophilus</i>.
DOI: 10.6084/m9.figshare.25810531
title: FK-6B

description: FK-6B investigates the impact of <i>Bifidobacterium</i> <i>bifidum</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FK-6B:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>6: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is <i>Bifidobacterium</i> <i>bifidum</i>.
DOI: 10.6084/m9.figshare.25810531.v1
title: FK-6B

description: FK-6B investigates the impact of <i>Bifidobacterium</i> <i>bifidum</i> treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample FK-6B:<br>F: Denotes the strain ST-42 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>6: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is <i>Bifidobacterium</i> <i>bifidum</i>.
DOI: 10.6084/m9.figshare.25810534
title: CA-5G

description: CA-5G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample CA-5G:<br>C: Denotes the strain ST-2 of Clostridioides difficile.<br>A: Represents timepoint 2, indicating sampling before C. difficile infection.<br>5: Refers to the specific mouse number under investigation.<br>G: Indicates the treatment administered, which in this case is without treatment.
DOI: 10.6084/m9.figshare.25810534.v1
title: CA-5G

description: CA-5G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample CA-5G:<br>C: Denotes the strain ST-2 of Clostridioides difficile.<br>A: Represents timepoint 2, indicating sampling before C. difficile infection.<br>5: Refers to the specific mouse number under investigation.<br>G: Indicates the treatment administered, which in this case is without treatment.
DOI: 10.6084/m9.figshare.25810537
title: AA-1P

description: AA-1P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-1P:<br>A: Denotes the control group.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>1: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.