cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10171891
title: Dataset for the article 'Estimating countries' additional carbon accountability for closing the mitigation gap based on past and future emissions'.

description: Dataset for the article 'Estimating countries’ additional carbon accountability for closing the mitigation gap based on past and future emissions', published in Nature Communications. DOI: 10.1038/s41467-024-54039-x

TablesInManuscriptandCalculations.xlsx includes a calculations sheet where the main results can be estimated using only Excel, and each respective table found in the article.

PlannedEmissions.xlsx includes estimated pathways for all analyzed countries during 2023-2070. Results are given in million tonnes of carbon dioxide (MtCO₂).

DataForSensitivityAnalysis.xlsx is a full database with all the results used in the article, both the main approach and sensitivity cases.

These files are generated using R-code available at:

https://github.com/morfeldt/AdditionalCarbonAccountability
DOI: 10.5281/zenodo.10407135
title: Circulation and Retention of River Plumes Around Capes

description: Supporting data for the JGR-Oceans Manuscript: Circulation and Retention of River Plumes Around Capes by Pareja-Roman, Chant, Mazzini, and Cole.
description: This dataset shows the idealized model results with plume-cape interaction under wind (_w) and no wind (_now). The subscript number of each file is the radius of curvature of the cape for each scenario (in km). Surface values are included. GRD files are the model grids for each scenario.
DOI: 10.5281/zenodo.10891379
title: XBT data from the SAMOWA project FAPESP 2015/26450-8

description: Collection of 21 original XBT data files in text format, compressed by this command on a linux 64 system:

tar -czvf XBT_text_SAMOWA_01_to_21.tgz samowa*.edf

Uncompress it with:

tar xvf XBT_text_SAMOWA_01_to_21.tgz

These are human-readable text files. There is a standard XBT header and a table with depth in m, temperature in-situ in Celsius and estimated sound velocity in m/s.
DOI: 10.5281/zenodo.10892588
title: Glider Data South Atlantic Subtropical Model Water (SAMOWA) Project 2018

description: Glider data collected at the South Atlantic ocean during the winter of 2018 (see Sato et al. (2024), JGR-Oceans, for details).

The files are organized by tracks performed by the glider.

The data are in Matlab format and the variables are:

dd is the julian day of 2018, lat is latitude, lon is longitude, pre is pressure, rhoi, density, 

and ssi and tti are the absolute salinity and the conservative temperature.

Uncompress the file with: tar xvf samowa_glider2018_mat.tgz

If you want to read this file in python, use: loadmat from scipy.io.

All variables are in SI units.

 
description: The data were collected from the Project SAMOWA (2015/26450-8) funded by  FAPESP.

More details in Sato et al. (2024) - JGR-Oceans
DOI: 10.5281/zenodo.11483478
title: Physics of sliding on water explains morphological and behavioural allometry across a wide range of body sizes in water striders (Gerridae)

description: Data set of species measurements and the MATLAB code of sliding water strider used in "Physics of sliding on water predicts morphological and behavioral allometry across a wide range of body sizes in water striders (Gerridae)"
description: Name 'hylactor' in the code was misused, since we misidentified Ptilomera tigrina as P. hylactor when we writing down codes.
DOI: 10.5281/zenodo.1256648
title: Ripple Complex Experiments Data Set At Ciem Large Scale Wave Flume Within Hydralab + Project.

description: The RIPCOM experiments (RIPple COMplex experiments) are presented in order to study the ripple growth conditions on large wave flume tests under fine unimodal, coarse unimodal and mixed sands conditions. The main objectives of the experiments is to improve and understand the protocols to perform mixed sediment experiments within the ripple regime and use/improve the equipment developed at Task 9.1 of the COMPLEX Joint Research Activity within Hydralab+. The experiments were carried out in the large scale wave flume CIEM at Universitat Politècnica de Catalunya (UPC), Barcelona.
The experimental plan is divided in three steps:
1. Find the optimum wave conditions that ensure ripples (based on measured velocities and previous literature studies) on the study area. Test the targeted waves with unimodal fine sediment (d 50 =0.250 mm) and measure the obtained ripples under the tested conditions. From the obtained measurements, the waves to be used on the next two steps are selected in order to fix the best conditions to produce ripples within the experimental constrains.
2. The 13 upper cm of the fine sediment is removed and replaced by the coarser sediment (d 50 =0.545 mm). Once that is done the selected waves to be tested are reproduced and the bottom bedforms are measured.
3. Mix both sediments fine and coarser sand homogeneously in order to repeat the selected wave conditions and measure the ripples growth and evolution under mixed sediment conditions.
Due to its size, the data set can not be placed on this repository and will be provided on demand. Please contact with the authors or with the data manager of the CIEM installation.
DOI: 10.5281/zenodo.13776250
title: [NGC5084]  SAUNAS II: Discovery of Cross-shaped X-ray Emission and a Rotating Circumnuclear Disk in the Supermassive S0 Galaxy NGC 5084

description: The contained FITS files represent the processed Chandra/ACIS X-ray surface brightness maps of the NGC5084 galaxy, observed with Chandra/ACIS and analyzed with the SAUNAS pipeline as described in Borlaff et al. 2024b (https://ui.adsabs.harvard.edu/abs/2024arXiv240810449B/abstract). All the images have the photometric calibrations (in units of photons cm-2 s-1 pixel-1) and have been astrometrically aligned. 

Each file contains four FITS extensions as detailed below: 

----

EXTENSION NAME           TYPE              SIZE               DETAILS               

----

0      INFO                         no-data         0                      BLANK EXTENSION. 1      SB_FLUX                  float64         512x512           X-RAY SURFACE BRIGHTNESS MAP. [photons cm-2 s-1 pixel-1] 2      STD_SB_FLUX        float64         512x512           X-RAY SURFACE BRIGHTNESS NOISE MAP [photons cm-2 s-1 pixel-1]3      SNR                         float64         512x512           SIGNAL-TO-NOISE RATIO [ - ]

-----------

 

Use the SNR extension (extension #3) to determine if your source of interest in the SB_FLUX map (extension #1) is statistically significant over the background limit.
DOI: 10.5281/zenodo.13869524
title: Data from systematic review of uses of remote sensing in disease ecology

description: These data accompany the paper "The potential of remote sensing for improved infectious disease ecology research and practice" by Teitelbaum, C., Ferraz, A., De La Cruz, S.E.W., Gilmour, M.E., and Brosnan, I.G.. Each .csv file contains data from primary articles that used remote sensing to study disease ecology. Studies are identified by a unique study ID in each table; relationships between tables are usually many-to-many, except for the biobliographic details, which contains only one entry per article. The metadata.csv file describes columns in all sheets.
DOI: 10.5281/zenodo.13883177
title: Processed MERFISH datasets for brain aging (coronal, sagittal) and rejuvenation (exercise, partial reprogramming)

description: This repository contains several AnnData ".h5ad" objects containing the processed MERFISH data and metadata for the datasets generated in our study:



"aging_coronal.h5ad" - the aging coronal section dataset

"aging_sagittal.h5ad" - the aging sagittal section dataset

"exercise.h5ad" - exercise dataset

"reprogramming.h5ad" - partial reprogramming dataset


 

Key metadata are saved as observation annotations in each object, and include:



"mouse_id" - identifier for mouse from which the cell was derived

"slide_id" - identifier for MERSCOPE slide

"batch" - A and B denote different experimental batches for MERFISH

"age" - mouse age in months

"cohort" - experimental condition / group

"celltype" - cell type annotation

"region" - brain region annotation

"subregion" - brain subregion annotation (will be more variabile/noisy than region)
DOI: 10.5281/zenodo.13931612
title: DiffSBDD datasets
DOI: 10.5281/zenodo.14032234
title: rachaelpung/temporal_networks:

description: Code for temporal contact patterns and the implications for predicting superspreaders and planning of targeted outbreak control
DOI: 10.5281/zenodo.14176986
title: Dataset for spin-symmetry-enforced solution of the many-body Schrödinger equation with a deep neural network

description: Raw data used to derive the estimation values shown in the figures of the manuscript.
DOI: 10.5517/ccdc.csd.cc2bqthd
title: CCDC 2166884: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Constantin G. Daniliuc, Dirk Holschumacher, Matthias Tamm|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2bqtjf
title: CCDC 2166885: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Constantin G. Daniliuc, Dirk Holschumacher, Matthias Tamm|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2fpjrf
title: CCDC 2255025: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold and Phil Baran|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6073/pasta/c40db2c8629cfa3fbe80fdc9e086a9aa
title: SBC LTER: Reef: California kelp canopy and environmental variable dynamics

description: This dataset contains time series of kelp canopy area for giant
 kelp, Macrocystis pyrifera, and bull
 kelp, Nereocystis luetkeana, and canopy
 biomass of giant kelp derived from Landsat satellite imagery along
 with time series of environmental variables known to be associated
 with kelp forest dynamics. Data are organized into a single NetCDF
 file and kelp canopy data are co-located with the nearest
 environmental data point.
DOI: 10.6084/m9.figshare.24973665
title: <b>Supplementary data for </b><b>Reduced plastid genomes of</b><b> </b><b>colorless facultative pathogens</b><b> </b><b><i>Prototheca</i></b><b> </b><b>(Chlorophyta) are</b><b> </b><b>retained for membrane transport genes</b>

description: <b>Supplementary data for</b><b> </b><b>Reduced plastid genomes of</b><b> </b><b>colorless facultative pathogens</b><b><i>Prototheca</i></b><b> </b><b>(Chlorophyta) are</b><b> </b><b>retained for membrane transport genes</b>
DOI: 10.6084/m9.figshare.25539493
title: Genome assembly and annotations of A. distichum and F. ovata

description: This project aims to provide the genome assembly and annotations of <i>A. distichum</i> and <i>F. ovata</i> using a combination of NGS sequenceing and Hi-C scaffolding.
DOI: 10.6084/m9.figshare.26324239
title: <b>A chromosome-level genome assembly of tropical purple sea urchin </b><b><i>Heliocidaris crassispina</i></b>

description: This study employed a combination of PacBio HiFi and Hi-C sequencing data to present a high-quality, chromosome-level assembly of <i>H. crassispina</i> genome.
DOI: 10.6084/m9.figshare.27289989
title: Supplementary Material for: Global, regional, and national burden of brain and central nervous system cancers for males from 1990 to 2021 and its predicted level in the next 25 years.

description: Background: A study of the global burden of cerebral and central nervous system (CNS) cancers from the Global Burden of Diseases (GBD) indicates that these cancers significantly contribute to morbidity and mortality internationally. To fully understand the global impact of CNS cancer, expanded research efforts are essential. We analyzed the temporal trend of the disease burden from 1990 to 2021 and made projections for the expected burden from 2020 through 2044.
Methods: We tapped into GBD 2021 Study data to evaluate CNS cancer incidence and trends among males. Prevalence was assessed with DisMod-MR, trends via cluster analysis, and Estimated Annual Percentage Change (EAPC) calculated via linear regression. Forecasts for 2022-2044 used APC and BAPC models, with a P-value &lt; 0.05 considered significant. Analyses relied on R software 4.0.2.
Results: In 2021, males experienced between 148,118 and 232,469 new brain and CNS cancer cases, indicating increased global burden from 1990 to 2021. An observed link between the prevalence's EAPCs and Human Development Indices (HDIs) suggests higher incidence in more developed regions. Projections using the APC model suggest rising numbers of cases and losses in Disability-Adjusted Life Years (DALYs) from 2020 to 2044, while Age-Standardized Rates (ASRs) are expected to decrease overall.
Conclusions: In summary, a higher Socio-Demographic Index (SDI) correlates with better outcomes for CNS cancer due to early medical interventions in regions with strong healthcare systems. This demonstrates the need for equitable healthcare policies that focus on improving diagnostic capabilities and professional training to enhance survival rates universally.
DOI: 10.6084/m9.figshare.27605058
title: Supplementary Material for: Race/Ethnic Differences in In-Hospital Mortality after Acute Ischemic Stroke

description: Introduction: Stroke mortality has declined, with differential changes by race; stroke is now the 5th leading cause of death overall, but 2nd leading cause of death in Black individuals. Little is known about recent race/ethnic and sex trends in in-hospital mortality after acute ischemic stroke (AIS) and whether system-level factors contribute to possible differences.
Methods: Using the National Inpatient Sample, adults (≥18 years) with a primary diagnosis of AIS from 2006 to 2017 (n=643,912) were identified. We assessed in-hospital mortality by race/ethnicity (White, Black, Hispanic, Asian/Pacific Islander [API], other), sex, and age. Hospitals were categorized by proportion of White patients served: “75% White hospitals”, “50-75% White hospitals”, and “&lt;50% White hospitals”. Using survey adjusted logistic regression, the association between race/ethnicity and odds of mortality was assessed, adjusting for key sociodemographic, clinical, and hospital characteristics (e.g., age, comorbidities, stroke severity, do not resuscitate orders, and palliative care).
Results: Overall, mortality decreased from 5.0% in 2006 to 2.9% in 2017 (p&lt;0.001). Comparing 2012-2017 to 2006-2011, there was a 68% reduction in mortality odds overall after adjusting for covariates, most prominent in White individuals (69%) and smallest in Black individuals (57%). Compared to White patients, Black and Hispanic patients had lower odds of mortality (adjusted odds ratio (aOR) 0.82, 95% CI 0.78-0.87 and aOR 0.93, 95% CI 0.87-1.00), primarily driven by those &gt;65 years (age x ethnicity interaction p &lt; 0.0001). Compared to White men, Black, Hispanic, and API men, and Black women had lower aOR of mortality. The differences in mortality between White and all the other race/ethnic groups combined were most pronounced in 75% White hospitals (aOR 0.80, 0.74-0.87) compared to 50-75% White hospitals (aOR 0.85, 0.79-0.91) and &lt;50% White hospitals (aOR 0.88, 0.81-0.95; interaction effect: p=0.005). 
Conclusion: AIS mortality decreased dramatically in recent years in all race/ethnic subgroups. Overall, while individuals of other race/ethnic subgroups had lower mortality odds compared to White individuals, this effect was significantly lower in hospitals serving predominantly White patients compared to those serving minority populations. White patients had higher , mortality than the other race/ethnic groups, a difference that was most striking in hospitals predominantly serving White patients. Further study is needed to understand these differences and to what extent sociocultural, biological, and system-level factors play a role.
DOI: 10.6084/m9.figshare.27607056
title: Transformers Significantly Improve Splice Site Prediction (Figure data)

description: This repository contains the numerical source data underlying the figures and results presented in the manuscript <i>"Transformers Significantly Improve Splice Site Prediction."</i> The dataset includes:<b>CSV files</b>: Data for the ROC and PRC curves featured in Figures 1 and 3.<b>TSF file</b>: Splice site predictions for CREBRF, as depicted in Figure 2.<b>Reference figures</b>: The corresponding figures for clarity and comparison.
DOI: 10.6084/m9.figshare.28005359
title: Supplementary Material for: Regorafenib for Hepatocellular Carcinoma in Real-World Practice (REFINE): A Prospective, Observational Study

description: Introduction: In the phase 3 RESORCE trial, regorafenib prolonged overall survival (OS) in patients with unresectable hepatocellular carcinoma (uHCC) whose disease progressed on prior sorafenib. The prospective, observational REFINE study aimed to evaluate the safety and effectiveness of regorafenib in a broader population of patients in real-world clinical practice, including patients with Eastern Cooperative Oncology Group performance status (ECOG PS) ≥2, Child–Pugh B liver status, and sorafenib-intolerance.

Methods: This international, prospective, multicenter study (NCT03289273) enrolled patients with uHCC for whom the decision to treat with regorafenib was made by their physician before enrollment, according to the local health authority-approved label. The primary aim was to evaluate the safety of regorafenib, including the incidence of treatment-emergent adverse events (TEAEs) and dose modifications due to TEAEs.

Results: Of the 1,028 patients enrolled, 1,005 initiated regorafenib and were eligible for analysis. Median age was 66 years (range 21–94); most patients were male (83%), Child–Pugh A (61%), and had an ECOG PS of 0 or 1 (82%) at study entry. Overall, 47%, 11%, and 40% of patients initiated regorafenib at 160, 120, and 80 mg/day, respectively. Median treatment duration was 3.7 months (range 1 day–38.9 months). Dose modifications and permanent discontinuation of regorafenib due to TEAEs occurred in 45% and 31% of patients, respectively. The most common drug-related TEAEs were hand–foot skin reaction (31%), diarrhea (26%), and fatigue (15%). Median OS was 13.2 months (95% confidence interval 11.6, 14.8).

Conclusion: The results of the real-world REFINE study confirmed the safety and effectiveness of regorafenib in a broad population of patients with uHCC. Of patients who received standard regorafenib dosing in REFINE, safety and efficacy findings were consistent with those reported in the RESORCE trial.
DOI: 10.14768/apd.1kbe-k532
title: African Pollen Database: Tanzania_Vincens_2006_trans fossil pollen dataset
DOI: 10.14768/apd.4c5c-ek32
title: African Pollen Database: Gabon_Henga_2016_trans fossil pollen dataset
DOI: 10.14768/apd.6egx-4b93
title: African Pollen Database: Tanzania_Vincens_1987_NATVL_trans fossil pollen dataset
DOI: 10.14768/apd.9gga-7570
title: African Pollen Database: Ghana_Maley_1983_trans fossil pollen dataset
DOI: 10.14768/apd.b4hn-n927
title: African Pollen Database: Chad_Ybert_TOTAL YEAR_1977_trans fossil pollen dataset
DOI: 10.14768/apd.c6bx-w448
title: African Pollen Database: Chad_Maley_80S_trans fossil pollen dataset
DOI: 10.14768/apd.eytd-e312
title: African Pollen Database: Benin_Tossous_TOTAL 2015_2017_trans fossil pollen dataset
DOI: 10.14768/apd.gqbd-4309
title: African Pollen Database: Cameroon_Vincens_2000_trans fossil pollen dataset
DOI: 10.14768/apd.k88h-3368
title: African Pollen Database: Ivory_Coast_Ybert_TOTAL YEAR_1977_trans fossil pollen dataset
DOI: 10.14768/apd.qe0p-ey30
title: African Pollen Database: Chad_Maley_80VL_trans fossil pollen dataset
DOI: 10.14768/apd.s1mb-ka02
title: African Pollen Database: Kenya_Hedberg_1954_trans fossil pollen dataset
DOI: 10.14768/apd.sk1x-wp74
title: African Pollen Database: Uganda_Hamilton_1972_trans fossil pollen dataset
DOI: 10.1594/pangaea.883614
title: Environmental context of all stations from the Tara Oceans Expedition (2009-2013), about the annual cycle of key parameters estimated daily from remote sensing products at a spatial resolution of 100km

description: The Tara Oceans Expedition (2009-2013) sampled the world oceans on board a 36 m long schooner, collecting environmental data and organisms from viruses to planktonic metazoans for later analyses using modern sequencing and state-of-the-art imaging technologies. Tara Oceans Data are particularly suited to study the genetic, morphological and functional diversity of plankton. The present data set includes text files, one for each station, that contain the annual cycle of key parameters estimated daily from remote sensing products at a spatial resolution of 100km centered on the sampling location. File names correspond to the station identifier (TARA_station#). A description of all parameters is provided in a README file.
DOI: 10.1594/pangaea.892295
title: Basic and other measurements of radiation at station Cape Baranova (2016-09)
DOI: 10.25614/dbr2000_2009
title: North Carolina detailed birth records during the period 2000 - 2009

description: Long form birth records for children born in the state of North Carolina during the period 2000-2009. Includes information regarding maternal health, infant health, events of labor and delivery, and maternal and paternal demographics.
DOI: 10.3886/e209533v1
title: Role Models and Theory of Mind: Teacher Vaccinations and Student Success

description: We provide experimental evidence that role models can galvanize pro-social actions amid global crises, exemplified by the COVID-19 pandemic. In a randomized control trial comparing role models, cash incentives, and celebrity endorsements, only role models successfully mitigated vaccine reluctance and ameliorated pandemic-induced educational setbacks. Monthly tracking of vaccination status was achieved via QR-code verified certificates. Theory-of-mind behavioral data on the mentalizing of others shed light on the mechanism underlying the role model effect. This research, the first from the Global South, shows how role models and theory-of-mind have the potential to play a valuable role in tackling global challenges.
DOI: 10.57745/3fscxe
title: batiments__21.cpg
DOI: 10.57745/hmv5ah
title: batiments__21.shp
DOI: 10.57745/vlnbt5
title: batiments__21.dbf
DOI: 10.57745/7y1p2p
title: batiments__21.prj
DOI: 10.57745/niiyhf
title: batiments__21.shx
DOI: 10.57745/3ztz23
title: images_30__21.tar.gz
DOI: 10.57745/9xvrqq
title: images_00__21.tar.gz
DOI: 10.57745/ij0sd3
title: images_37__21.tar.gz
DOI: 10.57745/z61yuq
title: images_34__21.tar.gz
DOI: 10.6084/m9.figshare.30330238
title: Transcriptome assembly of <i>Cynanchum rostellatum</i>

description: de novo assembled transcriptome sequences of <i>Cynanchum rostellatum</i>. In particular, only coding sequences (CDS) are included.
DOI: 10.6084/m9.figshare.30330238.v1
title: Transcriptome assembly of <i>Cynanchum rostellatum</i>

description: de novo assembled transcriptome sequences of <i>Cynanchum rostellatum</i>. In particular, only coding sequences (CDS) are included.
DOI: 10.57745/5g239e
title: images_35__21.tar.gz
DOI: 10.57745/iorauk
title: images_28__21.tar.gz
DOI: 10.57745/6qrv1l
title: images_02__21.tar.gz
DOI: 10.57745/3pvrhw
title: images_11__21.tar.gz
DOI: 10.57745/9fukwa
title: images_16__21.tar.gz
DOI: 10.57745/qvi7vf
title: images_21__21.tar.gz
DOI: 10.57745/h926nb
title: images_12__21.tar.gz
DOI: 10.57745/i3uwkh
title: images_04__21.tar.gz
DOI: 10.57745/jg8j4b
title: images_23__21.tar.gz
DOI: 10.57745/kabtzi
title: images_20__21.tar.gz
DOI: 10.57745/3gsrij
title: images_38__21.tar.gz
DOI: 10.57745/u3upzr
title: images_33__21.tar.gz
DOI: 10.57745/idsn2j
title: images_18__21.tar.gz
DOI: 10.57745/puy6x1
title: images_25__21.tar.gz
DOI: 10.57745/6eezjc
title: images_10__21.tar.gz