cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24628375
title: Circulating cytokines and alcoholic liver disease: a two-sample bidirectional Mendelian randomization study

description: Increased inflammation in the liver during ethanol exposure is a major feature of alcoholic liver disease (ALD). An important contributing component to the development of ALD is the inflammatory response brought on by immunological response, however the connection between individual circulating cytokines and ALD is still unclear. To ascertain the causation, we conducted a two-sample bidirectional Mendelian randomization research. We extracted 41 cytokines and growth factors of 8293 Europeans and ALD cases of the same ethnicity (1416 cases and 217,376 controls) from the Genome-Wide Association Studies (GWAS) database for two-sample bidirectional MR analysis. Our analyses suggest that higher interleukin-7 (IL-7) levels are associated with an increased risk of ALD (<i>p</i> = 0.028, OR = 1.191,95% CI = 1.019–1.392), while tumor necrosis factor related apoptosis inducing ligand (TRAIL) is a protective factor for ALD (<i>p</i> = 0.032, OR = 0.863, 95% CI = 0.754–0.988) which can reduce the risk of disease occurrence. In addition, genetically predicted ALD does not affect the expression of circulating cytokines regulators. Our study supports that cytokines play a pivotal role in the pathogenesis of ALD. To determine the mechanisms and pathways of action of these biomarkers, further basic research is required to ensure their clinical suitability for preventing and treating ALD.
DOI: 10.6084/m9.figshare.24516622.v1
title: Real-world long-term effectiveness of ustekinumab in ulcerative colitis: results from a spanish open-label cohort

description: Ustekinumab was recently approved for the treatment of moderate-to-severe ulcerative colitis (UC). Although data from the UNIFI clinical trial are encouraging, real-world data assessing effectiveness and safety are scarce. The aim of this study was to assess the effectiveness, safety and pharmacokinetics of ustekinumab in a large cohort of refractory UC patients. Multicenter observational study of UC patients who received ustekinumab for active disease. The Partial Mayo Score (PMS), endoscopic activity, C-reactive protein (CRP) and faecal calprotectin (FC) were recorded at baseline and at different time points. Demographic and clinical data, adverse events (AEs) and surgeries were documented. A total of 108 patients were analyzed from 4 referral Spanish hospitals. The clinical remission rates were 59%, 56.5%, 57% and 69% of patients at weeks 8, 16, 24 and 52, respectively. Normalization of FC was achieved in 39.6%, 41% and 51% at weeks 8, 24 and 52, respectively. CRP normalization was observed in 79%, 75% and 76.5% of patients at weeks 8, 24 and 52, respectively. Fewer previous anti-TNF agents and loss of response to anti-TNF were associated with clinical response and normalization of FC, respectively. AEs were observed in 5 patients, and 9 underwent colectomy. Ustekinumab persistence rates were 91%, 83% and 81% at 24, 48 and 96 weeks, respectively. Ustekinumab demonstrated, in the real-world setting, long-term effectiveness and a favorable safety profile in a cohort of refractory UC patients.
DOI: 10.6084/m9.figshare.24628375.v1
title: Circulating cytokines and alcoholic liver disease: a two-sample bidirectional Mendelian randomization study

description: Increased inflammation in the liver during ethanol exposure is a major feature of alcoholic liver disease (ALD). An important contributing component to the development of ALD is the inflammatory response brought on by immunological response, however the connection between individual circulating cytokines and ALD is still unclear. To ascertain the causation, we conducted a two-sample bidirectional Mendelian randomization research. We extracted 41 cytokines and growth factors of 8293 Europeans and ALD cases of the same ethnicity (1416 cases and 217,376 controls) from the Genome-Wide Association Studies (GWAS) database for two-sample bidirectional MR analysis. Our analyses suggest that higher interleukin-7 (IL-7) levels are associated with an increased risk of ALD (<i>p</i> = 0.028, OR = 1.191,95% CI = 1.019–1.392), while tumor necrosis factor related apoptosis inducing ligand (TRAIL) is a protective factor for ALD (<i>p</i> = 0.032, OR = 0.863, 95% CI = 0.754–0.988) which can reduce the risk of disease occurrence. In addition, genetically predicted ALD does not affect the expression of circulating cytokines regulators. Our study supports that cytokines play a pivotal role in the pathogenesis of ALD. To determine the mechanisms and pathways of action of these biomarkers, further basic research is required to ensure their clinical suitability for preventing and treating ALD.
DOI: 10.5281/zenodo.10717762
title: LINkS_WP2_THz_CNRS-L2C_COC_PS_2024-02-27_V1

description: In the LINkS project, polystyrene (PS), colourless and black Topas® COC 6013 samples had to be characterized in a wide THz frequency domain, from 70 GHz to 20 THz, to evaluate their transmittance. Depending on the frequency domain probed, the following techniques were used, in transmission configuration:- from 70 to 220 GHz : Virginia Diode Inc. (VDI) tunable sources(70-110 GHz, 110-170 GHz and 140-220 GHz) and a pyrometer as detector,- from 200 GHz to 3 THz : THz Time Domain Spectroscopy (THz-TDS),- from 1.5 THz to 20 THz : Far Infrared Fourier Transform Spectroscopy (FTIR).

This dataset contains 5 zipped folders, corresponding to different techniques used and a readme file.Each zip file contains measurement files and a readme file providing all details to reuse the data.

These data are displayed in the Deliverable on Polymer Characterization (D2.1, WP2) of the LINkS EU project, which will be available at https://cordis.europa.eu/project/id/964203/results.
DOI: 10.5281/zenodo.10717763
title: LINkS_WP2_THz_CNRS-L2C_COC_PS_2024-02-27_V1

description: In the LINkS project, polystyrene (PS), colourless and black Topas® COC 6013 samples had to be characterized in a wide THz frequency domain, from 70 GHz to 20 THz, to evaluate their transmittance. Depending on the frequency domain probed, the following techniques were used, in transmission configuration:- from 70 to 220 GHz : Virginia Diode Inc. (VDI) tunable sources(70-110 GHz, 110-170 GHz and 140-220 GHz) and a pyrometer as detector,- from 200 GHz to 3 THz : THz Time Domain Spectroscopy (THz-TDS),- from 1.5 THz to 20 THz : Far Infrared Fourier Transform Spectroscopy (FTIR).

This dataset contains 5 zipped folders, corresponding to different techniques used and a readme file.Each zip file contains measurement files and a readme file providing all details to reuse the data.

These data are displayed in the Deliverable on Polymer Characterization (D2.1, WP2) of the LINkS EU project, which will be available at https://cordis.europa.eu/project/id/964203/results.
DOI: 10.6084/m9.figshare.25298002
title: (CDD)Fig.4_source_data.xlsx

description: Figure 4
DOI: 10.15468/6c3nw6
title: Bryophyta of the Krasnokutsk territorial commune (hromada), Kharkiv region, Ukraine

description: The research focused on bryophytes, which are representatives of the divisions Anthocerotophyta, Marchantiophyta, and Bryophyta within the Slobozhanskyi National Nature Park's territory. These data were collected during research in 2013. Literature data: at the time of the study, information regarding the bryoflora of the Krasnokutsk district (within the boundaries up to 2020) was limited to the materials of S.V. Gapon (1992, 2011). She documented 28 species collected in the vicinity of the villages of Kozyivka, Parhomivka, Kachalivka, and the city of Krasnokutsk, without precise topographic references. Out of these, 18 species were identified by us again. Specifically, there was a complete absence of data on sphagnum mosses. One of the most notable ecosystems in this region consists of acidophilous fens located in depressions within pine forests. Historically, these depressions were once occupied by lakes on the river terraces. However, today, the majority of them have transformed into fens, reeds, marshes, or shallow lakes situated on the southern banks. These areas are typically characterized by the presence of Betula pubescens, Populus tremula, Alnus glutinosa, and sometimes feature Sphagnum mosses. A few depressions near Krasnokutsk still retain the characteristics of true peat bogs. They exhibit well-developed Sphagnum floating mats, open water surfaces, and a suppressed growth of pine and birch woods. These unique habitats, particularly unusual for a semi-arid region, have garnered the attention of biologists. The primary results of this research have been compiled in the "Chronicles of Nature of the Slobozhanskyi National Nature Park," which is an annually updated report on inventory and monitoring programs.
DOI: 10.5281/zenodo.10716721
title: sol-LAUT – Point clouds and hemispherical photographs for solar radiation modeling from Austrian forest inventory plots

description: The amount of solar radiation reaching the forest floor is a crucial parameter for the abundance and vitality of regenerating trees. Therefore, its quantification and characterization are of particular importance for forest management. The calculation of below-canopy light regime from forest point clouds collected with personal laser scanners offers an opportunity to assess the necessary metrics without the requirement of any additional data collection.

This dataset contains 3D point cloud data collected on 40 forest inventory plots in Austria, which can be found in the folder ‘PointClouds’. The scanner used for data acquisition was a mobile personal laser scanner (PLS) (ZEB Horizon, GeoSLAM Ltd., Nottingham, UK). Furthermore, hemispherical photographs were taken at the same forest plots using the Solariscope SOL 300 (Behlin, Wedemark, Germany) as well as a Canon EOS 5D camera (Canon Inc., Ōta, Tokyo, Japan) mounted on a SLM9 self-levelling mount (Delta-T Devices Ltd., Burwell, Cambridge, UK) together with HemiView software (Delta-T Devices Ltd., 2016). The raw and classified images can be found in the corresponding subfolders (‘HemiView’ or ‘Solariscope’) in the folder ‘HemisphericalPhotography’. Additionally, the results obtained with the classified images of Solariscope and HemiView are included in the output files. Note that the results from the Solariscope survey represent average values over a predefined time span, in this case from April 1 to September 30, 2022. Also, the range of solar zenith angles considered for the analyses was set from 0 to 50° in the device settings, meaning that radiation values originating from moments with a solar elevation angle below 40° were not included into the calculations. The file 'Plots.csv' contains the geographical coordinates of the inventory plots (columns 'X' and 'Y', EPSG:31286). The file 'treespecies.csv' gives information on the percentage of tree species at each plot, which is necessary for the calculation of a plot-wise canopy extinction coefficient.
DOI: 10.5281/zenodo.10716722
title: sol-LAUT – Point clouds and hemispherical photographs for solar radiation modeling from Austrian forest inventory plots

description: The amount of solar radiation reaching the forest floor is a crucial parameter for the abundance and vitality of regenerating trees. Therefore, its quantification and characterization are of particular importance for forest management. The calculation of below-canopy light regime from forest point clouds collected with personal laser scanners offers an opportunity to assess the necessary metrics without the requirement of any additional data collection.

This dataset contains 3D point cloud data collected on 40 forest inventory plots in Austria, which can be found in the folder ‘PointClouds’. The scanner used for data acquisition was a mobile personal laser scanner (PLS) (ZEB Horizon, GeoSLAM Ltd., Nottingham, UK). Furthermore, hemispherical photographs were taken at the same forest plots using the Solariscope SOL 300 (Behlin, Wedemark, Germany) as well as a Canon EOS 5D camera (Canon Inc., Ōta, Tokyo, Japan) mounted on a SLM9 self-levelling mount (Delta-T Devices Ltd., Burwell, Cambridge, UK) together with HemiView software (Delta-T Devices Ltd., 2016). The raw and classified images can be found in the corresponding subfolders (‘HemiView’ or ‘Solariscope’) in the folder ‘HemisphericalPhotography’. Additionally, the results obtained with the classified images of Solariscope and HemiView are included in the output files. Note that the results from the Solariscope survey represent average values over a predefined time span, in this case from April 1 to September 30, 2022. Also, the range of solar zenith angles considered for the analyses was set from 0 to 50° in the device settings, meaning that radiation values originating from moments with a solar elevation angle below 40° were not included into the calculations. The file 'Plots.csv' contains the geographical coordinates of the inventory plots (columns 'X' and 'Y', EPSG:31286). The file 'treespecies.csv' gives information on the percentage of tree species at each plot, which is necessary for the calculation of a plot-wise canopy extinction coefficient.
DOI: 10.25611/8kwp-j680
title: Structural geology and evolution of the Sierra Madre Oriental during and after the Laramide orogeny at the latitude of Linares, NL., Mexico
DOI: 10.6084/m9.figshare.25183367.v1
title: <b>INFLUENCE OF DISPARITIES IN </b><b>GENOMIC LANDSCAPE OF GASTRIC CANCER</b>

description: The genomic characteristics of Peruvian patients with gastric adenocarcinoma from diverse socioeconomic backgrounds were examined in consideration of the possibility that patients from different socioeconomic backgrounds may be exposed to different risk factors.
DOI: 10.6084/m9.figshare.25183367
title: <b>INFLUENCE OF DISPARITIES IN </b><b>GENOMIC LANDSCAPE OF GASTRIC CANCER</b>

description: The genomic characteristics of Peruvian patients with gastric adenocarcinoma from diverse socioeconomic backgrounds were examined in consideration of the possibility that patients from different socioeconomic backgrounds may be exposed to different risk factors.
DOI: 10.5281/zenodo.10717913
title: APPROVAL OF THE PARAMETERS OF THE DEVICE FOR LOCAL APPLICATION OF ORGANIC FERTILIZERS
DOI: 10.5281/zenodo.10717914
title: APPROVAL OF THE PARAMETERS OF THE DEVICE FOR LOCAL APPLICATION OF ORGANIC FERTILIZERS
DOI: 10.15468/atfwjx
title: Parc éolien de Coatjégu-Données brutes suivi chiroptères en altitude 2022 - Dervenn

description: Données brutes enregistrées en nacelle pendant le suivi environnemental lors de la troisième année d'exploitation du parc
DOI: 10.15468/rdw2fh
title: Parc éolien du LUSIGNAN-Parc éolien de Lusignan-Activité_nacelle-Chiroptères-2022-E3

description: Données issues du suivi acoustique des Chiroptères en nacelle du parc éolien de Lusignan pour l'année 2022 sous E3
DOI: 10.15468/8k9vss
title: ECM Energie France (Coivert et Vergné)-Suivis chiro en altitude 2022 sur le parc éolien de Coivert et Vergné

description: Suivi chiroptères en altitude sur ces deux parcs
DOI: 10.15468/44nvnj
title: Programme de connaissance des mammifères-[MAMMIFERE] - Chiroptère - Suivi des gîtes prioritaires

description: Cette étude vise à suivre l’évolution des populations de chauves-souris dans les gîtes remarquables du PNP. Parmi les gîtes de chiroptères présents au sein du parc, certains nécessitent une préservation plus importante. Chaque secteur doit alors suivre l’évolution des populations de chiroptères dans les gîtes définis comme prioritaires.
DOI: 10.21227/s12w-cc46
title: 0 GHz FMCW Radar Gesture Dataset

description: As the field of human-computer interaction continues to evolve, there is a growing need for new methods of gesture recognition that can be used in a variety of applications, from gaming and entertainment to healthcare and robotics. While traditional methods of gesture recognition rely on cameras or other optical sensors, these systems can be limited by factors such as lighting conditions and occlusions.To address these challenges, we have developed a new gesture dataset based on radar sensing technology. The dataset includes 21.000 carefully selected gestures, recorded using the BGT60TR13C XENSIV™ 60GHz Frequency Modulated Continuous Radar sensor.  We believe that this dataset will be an invaluable resource for researchers and developers working in the field of gesture recognition. By providing a large and diverse set of radar-based gesture data, we hope to enable the development of new and innovative applications that can enhance human-computer interaction in a wide range of domains.
DOI: 10.25611/c2bm-8k58
title: Structural geology and evolution of the Sierra Madre Oriental during and after the Laramide orogeny at the latitude of Linares, NL., Mexico
DOI: 10.5281/zenodo.10717972
title: ХОРИЖИЙ МАМЛАКАТЛАР ЖИНОЯТ ВА ЖИНОЯТ-ПРОЦЕССУАЛ ҚОНУНЧИЛИГИДА БИР-БИРИГА ТОБЕ БЎЛМАГАН ҲАРБИЙ ХИЗМАТЧИЛАР ЎРТАСИДАГИ ЎЗАРО МУНОСАБАТЛАРГА ОИД УСТАВ ҚОИДАЛАРИНИ БУЗИШ ЖИНОЯТЛАРИ ЮЗАСИДАН СУДГА ҚАДАР ИШ ЮРИТУВИНИ ТАРТИБГА СОЛУВЧИ НОРМАЛАР ТАҲЛИЛИ
DOI: 10.5281/zenodo.10717973
title: ХОРИЖИЙ МАМЛАКАТЛАР ЖИНОЯТ ВА ЖИНОЯТ-ПРОЦЕССУАЛ ҚОНУНЧИЛИГИДА БИР-БИРИГА ТОБЕ БЎЛМАГАН ҲАРБИЙ ХИЗМАТЧИЛАР ЎРТАСИДАГИ ЎЗАРО МУНОСАБАТЛАРГА ОИД УСТАВ ҚОИДАЛАРИНИ БУЗИШ ЖИНОЯТЛАРИ ЮЗАСИДАН СУДГА ҚАДАР ИШ ЮРИТУВИНИ ТАРТИБГА СОЛУВЧИ НОРМАЛАР ТАҲЛИЛИ
DOI: 10.21949/1530075
title: A MicroFreight Approach for Safer Streets: Curb Data Specification
DOI: 10.15468/bm95e7
title: Parc éolien de Gurunhuel (22) - Suivis postimplantation 2022 (2ème année)-Suivi postimplantation 2022 - Suivi de l'avifaune

description: Résultats du suivi de l'avifaune réalisé en 2022 dans le cadre de la 2ème année de suivi postimplantation du parc éolien de Gurunhuel (22)
DOI: 10.15468/9qju5x
title: Parc éolien de Saint-Généroux-CERA Environnement_Suivi ICPE_Mortalité 2023

description: Le jeu de données regroupent les cas de mortalité constatés sur le parc éolien de St-Généroux durant l'année 2022 - 2023
DOI: 10.15468/mkhxcn
title: Travaux de confortement rocheux - Déblai tête sud du tunnel de l'Araou-Diagnostic écologique (Données avifaune) projet Araou

description: Inventaire des oiseaux observés en 2022 et 2023 par Simethis grâce au protocole de prospection à vue et de point d'écoute (IPA et repasse) sur le site projet de confortement rocheux du tunnel d'Araou à Bedous. La collecte s'est focalisée sur la recherche des individus et des nids au sein de milieux favorables.
DOI: 10.15468/7dbjma
title: Parc éolien de Gurunhuel (22) - Suivis postimplantation 2022 (2ème année)-Suivi postimplantation 2022 - Suivi de la mortalité

description: Résultats des suivis de la mortalité réalisés en 2022 sur le parc éolien de Gurunhuel
DOI: 10.15468/jqy7da
title: Centrale Solaire des Trois Vallées-Données biodiversité CS DES TROIS VALLEES

description: Inventaire flore/faune centrale solaire des Trois Vallées
DOI: 10.34740/kaggle/dsv/7423794
title: US Domestic Flights Delay Prediction (2013 - 2018)
DOI: 10.5281/zenodo.10718032
title: Dataset related to article: INVOLVEMENT OF GABAERGIC INTERNEURON SUBTYPES IN 4-AMINOPYRIDINE-INDUCED SEIZURE-LIKE EVENTS IN MOUSE ENTORHINAL CORTEX IN VITRO

description: statistical analysis
DOI: 10.5281/zenodo.10718033
title: Dataset related to article: INVOLVEMENT OF GABAERGIC INTERNEURON SUBTYPES IN 4-AMINOPYRIDINE-INDUCED SEIZURE-LIKE EVENTS IN MOUSE ENTORHINAL CORTEX IN VITRO

description: statistical analysis
DOI: 10.6084/m9.figshare.25298767
title: Supplementary Material for: Fungal Keratitis Post FemtoLASIK: Novel Therapeutic Approach with LASIK Flap Autograft and Penetrating Keratoplasty, A Case Report

description: This case report describes a rare case of fungal keratitis following femtoLASIK surgery caused by Purpureocillium lilacinum. Despite targeted antifungal therapy, this case necessitated an innovative approach involving a tectonic autograft using the viable LASIK flap, followed by prompt penetrating keratoplasty. This technique was effective and was able to mitigate the progression to open globe.
DOI: 10.6084/m9.figshare.25298767.v1
title: Supplementary Material for: Fungal Keratitis Post FemtoLASIK: Novel Therapeutic Approach with LASIK Flap Autograft and Penetrating Keratoplasty, A Case Report

description: This case report describes a rare case of fungal keratitis following femtoLASIK surgery caused by Purpureocillium lilacinum. Despite targeted antifungal therapy, this case necessitated an innovative approach involving a tectonic autograft using the viable LASIK flap, followed by prompt penetrating keratoplasty. This technique was effective and was able to mitigate the progression to open globe.
DOI: 10.5281/zenodo.10717906
title: Genome size estimations with Feulgen in ethanol preserved collection material

description: Prepared under contract from the European Commission Grant agreement No. 101059492 EU Horizon Europe Research and Innovation action

We retrieved reliable genome size estimations from 165 samples, from 10 phyla (Porifera, Cnidaria, Annelida, Nemertea, Platyhelminthes, Brachiopoda, Mollusca, Echinodermata, Arthropoda, Chordata), and 73 species. For these samples, nuclei were easily identifiable in the samples, they were all similar in size, their staining was consistent, and their morphology did not vary extensively . It is important to note here, that nuclei measurements were easily performed in samples with small nuclei, like the sponge samples, where most nuclei could be measured in two or three different pictures , while large nuclei containing massive genomes occupied almost the entire picture, like in the crustacean Systellaspis debilis , making it more tedious to measure one nucleus per picture (to totalize 30 per sample). 








 [MOU1]if this is in the milestone, no need to repeat it here just refer to the milestone







 [MOU2]I think that since the milestone is not public, we might as well show it here.
DOI: 10.5281/zenodo.10717907
title: Genome size estimations with Feulgen in ethanol preserved collection material

description: Prepared under contract from the European Commission Grant agreement No. 101059492 EU Horizon Europe Research and Innovation action

We retrieved reliable genome size estimations from 165 samples, from 10 phyla (Porifera, Cnidaria, Annelida, Nemertea, Platyhelminthes, Brachiopoda, Mollusca, Echinodermata, Arthropoda, Chordata), and 73 species. For these samples, nuclei were easily identifiable in the samples, they were all similar in size, their staining was consistent, and their morphology did not vary extensively . It is important to note here, that nuclei measurements were easily performed in samples with small nuclei, like the sponge samples, where most nuclei could be measured in two or three different pictures , while large nuclei containing massive genomes occupied almost the entire picture, like in the crustacean Systellaspis debilis , making it more tedious to measure one nucleus per picture (to totalize 30 per sample). 








 [MOU1]if this is in the milestone, no need to repeat it here just refer to the milestone







 [MOU2]I think that since the milestone is not public, we might as well show it here.
DOI: 10.5281/zenodo.10716933
title: Dataset for "MarMot: Metamorphic Runtime Monitoring of Autonomous Driving Systems"

description: This is the dataset used in the paper "MarMot: Metamorphic Runtime Monitoring of Autonomous
Driving Systems".
DOI: 10.5281/zenodo.8202316
title: Dataset for "MarMot: Metamorphic Runtime Monitoring of Autonomous Driving Systems"

description: This is the dataset used in the paper "MarMot: Metamorphic Runtime Monitoring of Autonomous
Driving Systems".
DOI: 10.5281/zenodo.8202317
title: Dataset for "MarMot: Metamorphic Runtime Monitoring of Autonomous Driving Systems"

description: This is the dataset used in the paper "MarMot: Metamorphic Runtime Monitoring of Autonomous<br> Driving Systems".
DOI: 10.5281/zenodo.6784362
title: TAT-pulsar, a timing analysis toolkit for high energy pulsar phenomena

description: The real Crab observed data for code testing.