cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20624956
title: Additional file 11 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 11. Data analysed to determine the number of genes, if any, located between genes encoding kisspeptin-type receptors in the A. rubens genome. The results of this analysis are shown in Fig. 2C.
DOI: 10.6084/m9.figshare.20624956.v1
title: Additional file 11 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 11. Data analysed to determine the number of genes, if any, located between genes encoding kisspeptin-type receptors in the A. rubens genome. The results of this analysis are shown in Fig. 2C.
DOI: 10.6084/m9.figshare.20624959.v1
title: Additional file 12 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 12. Accession numbers for the precursors of neuropeptides included in the alignments shown in Fig. 3.
DOI: 10.6084/m9.figshare.20624959
title: Additional file 12 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 12. Accession numbers for the precursors of neuropeptides included in the alignments shown in Fig. 3.
DOI: 10.6084/m9.figshare.20624968.v1
title: Additional file 15 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 15. Receptor assay source data for the graphs shown in Fig. 5 and in additional files 14, 19 and 20.
DOI: 10.6084/m9.figshare.20624977
title: Additional file 17 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 17. Source sequence data for the comparative analysis of the structure of genes encoding precursors of candidate ligands for kisspeptin-type receptors in the starfish A. rubens and genes encoding vertebrate kisspeptin precursors, as shown in Fig. 4, and genes encoding precursors of candidate ligands for kisspeptin-type receptors in other echinoderms, as shown in additional file 16.
DOI: 10.6084/m9.figshare.20624968
title: Additional file 15 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 15. Receptor assay source data for the graphs shown in Fig. 5 and in additional files 14, 19 and 20.
DOI: 10.6084/m9.figshare.20624977.v1
title: Additional file 17 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 17. Source sequence data for the comparative analysis of the structure of genes encoding precursors of candidate ligands for kisspeptin-type receptors in the starfish A. rubens and genes encoding vertebrate kisspeptin precursors, as shown in Fig. 4, and genes encoding precursors of candidate ligands for kisspeptin-type receptors in other echinoderms, as shown in additional file 16.
DOI: 10.6084/m9.figshare.20624992
title: Additional file 2 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 2. Results of BLAST analysis of bilaterian proteomes using the sequence of the human kisspeptin receptor (NP_115940.2) and the sequences of kisspeptin-type receptors (XP_003727259.1, XP_011680162.1, XP_784787.2, XP_01669579.1, XP_011669580.1, XP_796690.1, XP_796286.1, XP_793873.1, XP_787561.2) previously identified in the sea urchin Strongylocentrotus purpuratus as queries. In each page the results of the BLAST (columns A-L) and reciprocal BLAST against S. purpuratus (columns O-Z) and H. sapiens (columns AC-AN) for each species are shown, with pages labelled with the name of the species analysed. In column AQ the annotation names from NCBI of the proteins used as queries for the reciprocal BLAST from each species are shown, with receptors annotated as GPR54 or kisspeptin-type receptors highlighted in blue.
DOI: 10.6084/m9.figshare.20624995
title: Additional file 3 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 3. Accession numbers of the receptor sequences used for the phylogenetic or CLANS analysis shown in Fig. 1 and in additional files 4, 5, 6 and 8.
DOI: 10.25574/09788
title: Chandra X-ray Observatory ObsId 9788

description: High Resolution Imaging and Spectroscopy of 8P/Tuttle
DOI: 10.6084/m9.figshare.20624992.v1
title: Additional file 2 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 2. Results of BLAST analysis of bilaterian proteomes using the sequence of the human kisspeptin receptor (NP_115940.2) and the sequences of kisspeptin-type receptors (XP_003727259.1, XP_011680162.1, XP_784787.2, XP_01669579.1, XP_011669580.1, XP_796690.1, XP_796286.1, XP_793873.1, XP_787561.2) previously identified in the sea urchin Strongylocentrotus purpuratus as queries. In each page the results of the BLAST (columns A-L) and reciprocal BLAST against S. purpuratus (columns O-Z) and H. sapiens (columns AC-AN) for each species are shown, with pages labelled with the name of the species analysed. In column AQ the annotation names from NCBI of the proteins used as queries for the reciprocal BLAST from each species are shown, with receptors annotated as GPR54 or kisspeptin-type receptors highlighted in blue.
DOI: 10.6084/m9.figshare.20624995.v1
title: Additional file 3 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 3. Accession numbers of the receptor sequences used for the phylogenetic or CLANS analysis shown in Fig. 1 and in additional files 4, 5, 6 and 8.
DOI: 10.6084/m9.figshare.20625013
title: Additional file 9 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 9. Source sequence data for the analysis of the structure of genes encoding kisspeptin-type, galanin-type and allatostatin A-type receptors shown in Fig. 2A and additional file 10 and genes encoding kisspeptin-type receptors in other echinoderms.
DOI: 10.6084/m9.figshare.20625013.v1
title: Additional file 9 of Receptor deorphanization in an echinoderm reveals kisspeptin evolution and relationship with SALMFamide neuropeptides

description: Additional file 9. Source sequence data for the analysis of the structure of genes encoding kisspeptin-type, galanin-type and allatostatin A-type receptors shown in Fig. 2A and additional file 10 and genes encoding kisspeptin-type receptors in other echinoderms.
DOI: 10.25574/09789
title: Chandra X-ray Observatory ObsId 9789

description: High Resolution Imaging and Spectroscopy of 8P/Tuttle
DOI: 10.25574/09791
title: Chandra X-ray Observatory ObsId 9791

description: High Resolution Imaging and Spectroscopy of 8P/Tuttle
DOI: 10.6084/m9.figshare.20625019
title: Additional file 2 of Methodology to derive preference for health screening programmes using discrete choice experiments: a scoping review

description: Additional file 2.
DOI: 10.6084/m9.figshare.20625019.v1
title: Additional file 2 of Methodology to derive preference for health screening programmes using discrete choice experiments: a scoping review

description: Additional file 2.
DOI: 10.6084/m9.figshare.20625051
title: Additional file 3 of Analysis of KIR gene variants in The Cancer Genome Atlas and UK Biobank using KIRCLE

description: Additional file 3: Supplementary Table S1. KIRCLE-inferred KIR allele genotypes in TCGA. Number of copies of each of 535 KIR coding alleles in 10,332 TCGA samples.
DOI: 10.6084/m9.figshare.20625051.v1
title: Additional file 3 of Analysis of KIR gene variants in The Cancer Genome Atlas and UK Biobank using KIRCLE

description: Additional file 3: Supplementary Table S1. KIRCLE-inferred KIR allele genotypes in TCGA. Number of copies of each of 535 KIR coding alleles in 10,332 TCGA samples.
DOI: 10.6084/m9.figshare.20625057
title: Additional file 4 of Analysis of KIR gene variants in The Cancer Genome Atlas and UK Biobank using KIRCLE

description: Additional file 4: Supplementary Table S2. KIRCLE-inferred KIR allele genotypes in UK Biobank. Number of copies of each of 535 KIR coding alleles in 49,694 UK Biobank samples. Note that UK Biobank ID numbers are study-dependent and not conserved between datasets. Therefore, if readers wish to make comparisons with correlates downloaded for their own project, they will need to re-compute these genotypes using KIRCLE on WES CRAM files that they themselves downloaded from UK Biobank.
DOI: 10.6084/m9.figshare.20625057.v1
title: Additional file 4 of Analysis of KIR gene variants in The Cancer Genome Atlas and UK Biobank using KIRCLE

description: Additional file 4: Supplementary Table S2. KIRCLE-inferred KIR allele genotypes in UK Biobank. Number of copies of each of 535 KIR coding alleles in 49,694 UK Biobank samples. Note that UK Biobank ID numbers are study-dependent and not conserved between datasets. Therefore, if readers wish to make comparisons with correlates downloaded for their own project, they will need to re-compute these genotypes using KIRCLE on WES CRAM files that they themselves downloaded from UK Biobank.
DOI: 10.6084/m9.figshare.20625081
title: Additional file 1 of Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia

description: Additional file 1: Table S1. Details of all isolates included in this study. NA’s indicate that no sequence data was generated for these isolates, therefore genome information is not available.
DOI: 10.6084/m9.figshare.20625081.v1
title: Additional file 1 of Epidemiology and genomic analysis of Klebsiella oxytoca from a single hospital network in Australia

description: Additional file 1: Table S1. Details of all isolates included in this study. NA’s indicate that no sequence data was generated for these isolates, therefore genome information is not available.
DOI: 10.6084/m9.figshare.20625085
title: Additional file 1 of Phylogenetic analyses of the mitochondrial, plastid, and nuclear genes of Babesia sp. Mymensingh and its naming as Babesia naoakii n. sp.

description: Additional file 1: Table S1. List of nuclear genes (n = 89) used for concatenated phylogenetic trees in Fig. 3.
DOI: 10.6084/m9.figshare.20625085.v1
title: Additional file 1 of Phylogenetic analyses of the mitochondrial, plastid, and nuclear genes of Babesia sp. Mymensingh and its naming as Babesia naoakii n. sp.

description: Additional file 1: Table S1. List of nuclear genes (n = 89) used for concatenated phylogenetic trees in Fig. 3.
DOI: 10.6084/m9.figshare.20625088
title: Additional file 2 of Phylogenetic analyses of the mitochondrial, plastid, and nuclear genes of Babesia sp. Mymensingh and its naming as Babesia naoakii n. sp.

description: Additional file 2: Table S2. List of nuclear genes (n = 30) used for concatenated phylogenetic trees in Fig. S1.
DOI: 10.6084/m9.figshare.20625088.v1
title: Additional file 2 of Phylogenetic analyses of the mitochondrial, plastid, and nuclear genes of Babesia sp. Mymensingh and its naming as Babesia naoakii n. sp.

description: Additional file 2: Table S2. List of nuclear genes (n = 30) used for concatenated phylogenetic trees in Fig. S1.
DOI: 10.25574/09815
title: Chandra X-ray Observatory ObsId 9815

description: AO9 Calibration Observations of Sirius B
DOI: 10.25574/09847
title: Chandra X-ray Observatory ObsId 9847

description: Joint XMM-Newton/Chandra/RXTE Observations of Dips in Cyg X-1
DOI: 10.25574/09858
title: Chandra X-ray Observatory ObsId 9858

description: HETG Observations of the Accretion Disk Corona Source X1822-371
DOI: 10.25574/09884
title: Chandra X-ray Observatory ObsId 9884

description: Understanding the nature of high inclination low mass X-ray binaries: broad-band and line spectra from A1744-361
DOI: 10.25574/09885
title: Chandra X-ray Observatory ObsId 9885

description: Understanding the nature of high inclination low mass X-ray binaries: broad-band and line spectra from A1744-361
DOI: 10.25574/09909
title: Chandra X-ray Observatory ObsId 9909

description: The clear view of WR140's collisionless shocks through the companion O-star wind
DOI: 10.6084/m9.figshare.20292303.v1
title: Supplementary Material for: Catheter ablation for atrial fibrillation in patients with chronic kidney disease and on dialysis – a meta-analysis and review

description: Background: Atrial fibrillation (AF) is common in chronic kidney disease (CKD) patients and is difficult to treat with antiarrhythmics and anticoagulants due to abnormal metabolism and increased side effects. Catheter ablation, if successful, may be a safer alternative. This review aims to analyse the effect of CKD or haemodialysis (HD) on recurrence of AF after catheter ablation . This review evaluates efficacy of catheter ablation therapy in CKD and haemodialysis (HD) patients by with single catheter ablation therapy. Methods: MEDLINE, and Embase, and Pubmed databases were searched until December 2020. Two authors abstracted the data independently. Relative risks were derived using random-effects meta-analysis. Results: Of the initially identified 520 782 studies, 65 and 34 observational studies on CKD and HD patients respectively were found reporting AF recurrence rates. During a mean (SD) follow-up of 25.5 (9.8) months, CKD patients have a higher risk of AF recurrence compared to patients without CKD (RR 2.34, 95% CI 1.36-4.02, p&lt;0.01). The heterogenicity test showed there were significant differences between individual studies (I2 = 91.0%, 95% CI 82.2%-95.6%). In a mean (SD) follow-up of 40.332.6 (20.826.8) months, HD patients may be at a higher risk of AF recurrence compared to healthy non-dialysis AF patients (RR 1.501.21, 95% CI 0.64-2.300.84-2.67, p=0.170.55). Heterogeneity analysis showed the studies were heterogeneous (I2 90.1�.3%, 95% CI 77.5%-95.6�.8%-96.9%, p &lt;0.01). Conclusion: Our meta-analysis suggests patients with CKD and on HD are more likely to have AF recurrences compared to AF patients who do not have CKD. However, more robust evidence from randomiszed controlled trials comparing catheter ablation and pharmaceutical rhythm therapy is urgently needed to guide therapy in this difficult to treat population.
DOI: 10.25574/09938
title: Chandra X-ray Observatory ObsId 9938

description: IM Lup comes to age: A turnover from accretion to coronae?
DOI: 10.25574/09939
title: Chandra X-ray Observatory ObsId 9939

description: Using a Cool B Supergiant to Probe the Deepest X-Ray Emitting Layers of a Dense Stellar Wind
DOI: 10.25574/09940
title: Chandra X-ray Observatory ObsId 9940

description: Using a Cool B Supergiant to Probe the Deepest X-Ray Emitting Layers of a Dense Stellar Wind
DOI: 10.25574/09941
title: Chandra X-ray Observatory ObsId 9941

description: Testing the Colliding Wind Paradigm: X-rays from the Wolf-Rayet Binary System WR 147
DOI: 10.25574/09942
title: Chandra X-ray Observatory ObsId 9942

description: Testing the Colliding Wind Paradigm: X-rays from the Wolf-Rayet Binary System WR 147
DOI: 10.25574/09943
title: Chandra X-ray Observatory ObsId 9943

description: V2129 Oph: a close look at a CTTS
DOI: 10.25574/09944
title: Chandra X-ray Observatory ObsId 9944

description: V2129 Oph: a close look at a CTTS
DOI: 10.25574/09945
title: Chandra X-ray Observatory ObsId 9945

description: Testing Shock Dynamics in Eta Carinae with HETGS After the 2009 Periastron Passage
DOI: 10.25574/09946
title: Chandra X-ray Observatory ObsId 9946

description: Testing Shock Dynamics in Eta Carinae with HETGS After the 2009 Periastron Passage
DOI: 10.25574/09947
title: Chandra X-ray Observatory ObsId 9947

description: The true nature of HD 110432: the most extreme gamma Cas analog
DOI: 10.25574/09948
title: Chandra X-ray Observatory ObsId 9948

description: The Origin of Hard X-rays in M17's Remarkable O4-O4 Binary
DOI: 10.25574/09966
title: Chandra X-ray Observatory ObsId 9966

description: CP Puppis, a template for the secular evolution of novae
DOI: 10.25574/09967
title: Chandra X-ray Observatory ObsId 9967

description: CP Puppis, a template for the secular evolution of novae
DOI: 10.25574/09969
title: Chandra X-ray Observatory ObsId 9969

description: The Nature of the Soft Component in the Symbiotic Star CH Cygni
DOI: 10.25574/09970
title: Chandra X-ray Observatory ObsId 9970

description: Grating spectroscopy of a bright nova in outburst
DOI: 10.6084/m9.figshare.20624958.v1
title: Additional file 1 of Orally administered Odoribacter laneus improves glucose control and inflammatory profile in obese mice by depleting circulating succinate

description: Additional file 1. Abundance of microbial taxa in db/db mice at phylum level.
DOI: 10.26186/147029
title: 2022 Offshore Petroleum Acreage Release Areas

description: The annual offshore petroleum exploration acreage release is part of the government’s strategy to promote offshore oil and gas exploration. Each year, the government invites companies to bid for the opportunity to invest in oil and gas exploration in Australian waters. The 2022 acreage release consists of 10 areas offshore of the Northern Territory, Western Australia, Victoria, and the Ashmore and Cartier Islands.
DOI: 10.6084/m9.figshare.17913863.v8
title: A complete genome of Bathymodiolus thermophilus thioautotrophic symbiont reveals a unique hydrogenase operon among hydrothermal vent mussel symbionts

description: The mytilid mussel <em>Bathymodiolus thermophilus</em> lives in the deep-sea hydrothermal vent regions thanks to its symbiotic relationship with chemosynthetic Gammaproteobacteria species which reside inside specialized gill cells. The symbionts in the gill bacteriocytes oxidize the reduced sulfur amply available in the vent environment. Here we sequenced and assembled the complete genome of a gill symbiont sampled from an individual mussel from the East Pacific Rise (EPR9N), using PacBio sequencing technology. The final symbiont assembly consists of a single contig size of 2.83 Mb, with a GC content of 38.6% and encodes for 2,133 protein-coding genes. CRISPR diversity analysis confirmed this genome is issued from a single symbiont strain. Comparative analysis revealed 2,554 core gene clusters were shared with other <em>B. thermophilus</em> thiotrophic gill symbiont genomes whereas 125 were unique to this EPR9N strain. In addition, we found that EPR9N strain has a unique hydrogenase operon among <em>Bathymodiolus</em> mussels consisting of additional H2-sensing hydrogenase subunits and a histidine kinase gene. Also, we found methylated regions distributed in patches throughout the EPR9N genome, mostly in the transposases regions and densely present in the rRNA gene regions. Variation in genome size, gene content and genome re-arrangements across individual hosts suggests multiple symbiont strains can associate with <em>B. thermophilus</em>. This complete mussel symbiont genome will be invaluable for further comparative genomic analyses studying structural genome evolution, symbiont population diversity, and symbiont ecology in the deep-sea chemosynthetic environments.
DOI: 10.13025/a370-ap38
title: RECIRC: The Reception and Circulation of Early Modern Women’s Writing, 1550-1700
DOI: 10.6084/m9.figshare.20617713
title: Supporting data manuscript oral ins delpdf.pdf

description: Supporting information for experiment
DOI: 10.6084/m9.figshare.20617713.v2
title: Supporting data manuscript oral ins delpdf.pdf

description: Supporting information for experiment
DOI: 10.6084/m9.figshare.20617713.v1
title: Supporting data manuscript oral ins delpdf.pdf

description: Supporting information for experiment
DOI: 10.5517/ccdc.csd.cc2b53m8
title: CCDC 2149869: Experimental Crystal Structure Determination

description: Related Article: Akira Sugimoto, Sotaro Kusumoto, Manabu Nakaya, Yoshihiro Sekine, Leonard F. Lindoy, Shinya Hayami|2022|CrystEngComm|24|4656|doi:10.1039/D2CE00402J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bgy5y
title: CCDC 2159310: Experimental Crystal Structure Determination

description: Related Article: Ting Shao, Jun Miao Gong, Jia Liu, Li Jun Han, Ming Chen, Qiangqiang Jia, Da Wei Fu, Hai-Feng Lu|2022|CrystEngComm|24|4346|doi:10.1039/D2CE00541G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26sfr6
title: CCDC 2049278: Experimental Crystal Structure Determination

description: Related Article: J. Jirat, M. Babor, L. Ridvan, E. Skorepova, M. Dusek, M. Soos|2022|IUCrJ|9|508|doi:10.1107/S2052252522005577
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c1x6k
title: CCDC 2176578: Experimental Crystal Structure Determination

description: Related Article: W. Clegg, R.L. Gill|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26sft8
title: CCDC 2049280: Experimental Crystal Structure Determination

description: Related Article: J. Jirat, M. Babor, L. Ridvan, E. Skorepova, M. Dusek, M. Soos|2022|IUCrJ|9|508|doi:10.1107/S2052252522005577
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26sfwb
title: CCDC 2049282: Experimental Crystal Structure Determination

description: Related Article: J. Jirat, M. Babor, L. Ridvan, E. Skorepova, M. Dusek, M. Soos|2022|IUCrJ|9|508|doi:10.1107/S2052252522005577
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.