cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5127628.v1
title: Supplementary Material for: Maternal Style Selectively Shapes Amygdalar Development and Social Behavior in Rats Genetically Prone to High Anxiety

description: The early-life environment critically influences neurodevelopment and later psychological health. To elucidate neural and environmental elements that shape emotional behavior, we developed a rat model of individual differences in temperament and environmental reactivity. We selectively bred rats for high versus low behavioral response to novelty and found that high-reactive (bred high-responder, bHR) rats displayed greater risk-taking, impulsivity and aggression relative to low-reactive (bred low-responder, bLR) rats, which showed high levels of anxiety/depression-like behavior and certain stress vulnerability. The bHR/bLR traits are heritable, but prior work revealed bHR/bLR maternal style differences, with bLR dams showing more maternal attention than bHRs. The present study implemented a cross-fostering paradigm to examine the contribution of maternal behavior to the brain development and emotional behavior of bLR offspring. bLR offspring were reared by biological bLR mothers or fostered to a bLR or bHR mother and then evaluated to determine the effects on the following: (1) developmental gene expression in the hippocampus and amygdala and (2) adult anxiety/depression-like behavior. Genome-wide expression profiling showed that cross-fostering bLR rats to bHR mothers shifted developmental gene expression in the amygdala (but not hippocampus), reduced adult anxiety and enhanced social interaction. Our findings illustrate how an early-life manipulation such as cross-fostering changes the brain's developmental trajectory and ultimately impacts adult behavior. Moreover, while earlier studies highlighted hippocampal differences contributing to the bHR/bLR phenotypes, our results point to a role of the amygdala as well. Future work will pursue genetic and cellular mechanisms within the amygdala that contribute to bHR/bLR behavior either at baseline or following environmental manipulations.
DOI: 10.6084/m9.figshare.1060243.v4
title: Jisc Collections aggregated APC data 2014

description: This spreadsheet contains aggregated, anonymised data collected by Information Power Ltd on behalf of Jisc Collections in March and April 2014. It is based on the APC expenditure of 24 UK higher education institutions. This data was the basis of the report 'Analysis of Jisc Collections APC data'. <strong>UPDATE</strong>: The original file published on 24 June 2014 was replaced on 25 June 2015 with one containing more accurate data, especially the inclusion of open access publisher PLOS.
DOI: 10.6084/m9.figshare.22800185.v2
title: Natural Language Understanding Dataset for DoD Cybersecurity Policies (CSIAC-DoDIN V1.0)

description: The CSIAC-DoDIN (V1.0) dataset collects cybersecurity-related policies and issuances developed by the DoD Deputy CIO for Cybersecurity. The dataset is based on a knowledge base that clusters and classifies these policies and provides an organizational structure. The dataset includes annotated documents with policies, responsibilities, procedures, classification, purpose, scope, and applicability. The dataset also includes cluster and subcluster classification, type classification, and text entailment. The dataset is available for research and experimentation, and baseline performances using transformer language models have been provided. The limitations of the dataset include its focus on DoD cybersecurity policies, the English language, and the provided tasks. The dataset can serve as a benchmark and basis for future cybersecurity policy datasets and applications. Still, caution should be exercised regarding potential risks and biases associated with transformer language models.
DOI: 10.6084/m9.figshare.23607972.v1
title: ICDM'23 Submission (DM468): Rule Mining for Correcting Classification Models

description: Source codes, datasets, and experimental scripts are available.
DOI: 10.6084/m9.figshare.5900965.v1
title: Currency demand and MIMIC models: towards a structured hybrid method of measuring the shadow economy - additional materials

description: Replication materials for restricted MIMIC model presented in the article "Currency demand and MIMIC models: towards a structured hybrid method of measuring the shadow economy".<br>
DOI: 10.6084/m9.figshare.8273876.v1
title: SNP.rar

description: SNP raw data <i></i><i></i><br><i></i>
DOI: 10.17632/4z748jnnjs
title: Consumer WTP for Sustainability Attributes in Beer

description: Estimation data from a targeted nationally representative sample eliciting consumer willingness to pay for sustainability attributes in beer. Different eco-labels are used to depict different aspects of sustainability including: water use, energy use, and landfill diversion. The survey was constructed in Qualtrics and distributed using Kanter. We collect information on demographic characteristics, beer buying/drinking behavior, and sustainability preferences, alongside a choice experiment. We find that consumers are willing to pay a price premium for sustainability attributes in beer (under all model specifications).
DOI: 10.17632/53mjngnskz
title: Immigration and Occupational Comparative Advantage

description: We test factors that determine the occupational choices of US immigrants.
DOI: 10.17632/6d4h6x87nb
title: Supporting data for: Ecological predictors of mosquito population and arbovirus transmission synchrony estimates

description: We examined seasonal mosquito and arbovirus surveillance data collected in Connecticut, United States from 2001 – 2020 to quantify spatial relationships in 19 mosquito species and 7 arboviruses time series while accounting for environmental factors such as climate and land cover characteristics as well as Euclidean distance. We determined that mosquito collections, on average, were significantly correlated up to 10 km though highly variable among the examined species. Few arboviruses displayed any synchrony and significant maximum correlated distances never exceeded 5 km. After accounting for distance, mixed effects models showed that mosquito or arbovirus identity explained more variance in synchrony estimates than climate or land cover factors. Correlated mosquito collections up to 10 – 20 km suggest that mosquito control operations for nuisance and disease vectors alike must expand treatment zones to regional scales for operations to have population-level impacts. Species identity matters as well, and some mosquito species will require much larger treatment zones than others. The much shorter correlated detection distances for arboviruses reinforce the notion that focal-level processes drive vector-borne pathogen transmission dynamics and risk of spillover into human populations. 

Specific metadata files and underlying data are supplied in this archive and methods needed to reproduce the results are detailed in the manuscript. In brief, the .csv files beginning with "Yr..." contain the annual, effort-corrected collections for either mosquito species or arboviruses collected in either ground-level, CO2-baited CDC light traps or ground-level CDC gravid traps at 87 surveillance sites in Connecticut, U.S. The .csv file beginning with "Coordinates.." contains the latitude and longitude coordinates (in decimal degrees) for each of the 87 surveillance sites. The file named "Mmetadata_Upload) contains brief explanations of each .csv file. Users will need a working knowledge of programming in R in order to replicate any and all methods and results presented in the manuscript.
DOI: 10.17632/v63758szmw
title: Data for: Proterozoic amphibolite facies retrogression of metapelitic granulites in the Southern Marginal Zone of the Limpopo Belt, South Africa.

description: This file contains representative major element compositions (wt.%),Zr-in-rutile, zircon and rutile U-Pb data and the metadata as well as additional figures.
DOI: 10.17632/yf786kcn3b
title: [Database] Precision Agriculture in the United States: A Comprehensive Meta-Review Inspiring Further Research, Innovation, and Adoption

description: Precision agriculture has emerged as a dominant force in the United States, with widespread adoption of advanced technologies and decision support systems (DSS) since the 1980s. Key tools such as variable rate application (VRA), autopilot systems, and remote sensing have become integral for U.S. farmers, offering invaluable insights from crop, soil, and weather information to optimize agricultural production while minimizing environmental impact. To synthesize and categorize the extensive research available on precision agriculture, a systematic review protocol has been designed. Our objective is to offer clear and authoritative insights into the nature, scope, and volume of this field. Implementing a rigorous search strategy, we utilized renowned databases such as ScienceDirect® and Web of ScienceTM to gather relevant and significant materiality. The retrieval process involved the use of indexing terms and Boolean operators, with a focus on 'precision agriculture' and 'precision farming', striking a balance between specificity and comprehensiveness. To ensure the credibility of our findings, only peer-reviewed papers authored by individuals affiliated with U.S. institutions have been included. Expert reviewers with deep knowledge in the field independently assessed the selected papers, thoroughly evaluating titles, abstracts, keywords, methods, conclusions, and declarations. Consistency and eligibility were paramount in determining which papers met the criteria for inclusion. Any discrepancies or disagreements were resolved through rigorous consensus-building discussions among the reviewers. Through this comprehensive meta-review, we provide a scientific contribution that enhances our understanding of precision agriculture, highlighting focus areas for further research and development (R&D). By synthesizing and categorizing the existing literature, we offer authoritative insights into the research landscape, informing future investigations and fostering innovation. Focusing specifically on the U.S., we shed light on the unique aspects and pioneering advancements in precision agriculture within the country. Ultimately, our findings have the potential to drive progress, contributing to sustainable development, increased productivity, enhanced environmental sustainability, and responsible agricultural practices.
DOI: 10.4121/19336700.v1
title: Data underlying the PhD thesis: "Associating properties of dissolved organic matter to competitiveness against organic micropollutant adsorption onto activated carbon"

description: This dataset is aligned with the thesis named "Associating properties of dissolved organic matter to competitiveness against organic micropollutant adsorption onto activated carbon"<br>
DOI: 10.6084/m9.figshare.25375330.v1
title: data

description: <b>Stacking Machine Learning Models Empowered High Time-height Resolved Ozone Profiling from Ground to the Stratopause Based on MAX-DOAS Observation</b>
DOI: 10.6084/m9.figshare.5128330.v1
title: Supplementary Material for: Early Antidepressant Treatment and All-Cause 30-Day Mortality in Patients with Ischemic Stroke

description: <b><i>Background:</i></b> Antidepressants, in particular selective serotonin reuptake inhibitors, have been associated with antithrombotic and neuroprotective properties and their more widespread use has been suggested in stroke recovery. However, data are sparse on their effects on the clinical outcome, including mortality, associated with early antidepressant treatment after stroke. We aimed to study all-cause 30-day mortality related to early antidepressant treatment in patients with ischemic stroke. <b><i>Methods:</i></b> We did a population-based follow-up study identifying patients from the Danish Stroke Registry admitted in the former Aarhus County from 2003 to 2010. During this time, initiation of antidepressant treatment during admission was registered in the Danish Stoke Registry. The registry also holds clinical information including stroke type, stroke severity and quality of in-hospital stroke care. Information on vital status and covariates including comorbidities and co-medication was obtained from the following population-based medical registries: the Danish Civil Registration System, Danish Medicines Agency's Medical Register and The Danish National Patients Registry. Information was linked using the unique civil registration number assigned to all Danish residents. Multivariable logistic regression was used to compute the adjusted odds ratio (OR) of 30-day mortality in patients treated with antidepressants during admission as compared to patients not treated. In addition, we did stratified analyses on sex, age, stroke severity and propensity score-matched analyses as well as multiple imputation. <b><i>Results:</i></b> Among 5,070 consecutive first-ever stroke patients without prior antidepressant treatment, 955 (18.8%) started antidepressant treatment during admission with a median time from admission until treatment of 5 days (interquartile range 2-11). The proportion of patients with severe stroke was higher among treated patients as compared to that among non-treated patients. The adjusted OR of 30-day mortality was 0.28 (95% confidence interval (CI) 0.18-0.43) for patients treated during admission as compared to patients not treated during admission. Stratification by stroke severity showed signs of effect modification, stratification by sex and age did not. Included in the propensity score-matched analyses were 1,908 patients matched 1:1. The propensity score-matched adjusted OR of death within 30 days was 0.31 (95% CI 0.19-0.49). <b><i>Conclusion:</i></b> Although early antidepressant treatment was more often started in patients with severe stroke, treatment was associated with significantly lower mortality. This result requires replication in randomized trials; however, it indicates that early start of antidepressant treatment after stroke may be safe and a more routine use may be feasible.
DOI: 10.17632/7r5bjr27xt
title: Development of Ce3+ and Li+ co-doped magnesium borate glass ceramics for optically stimulated luminescence dosimetry

description: Thermoluminescence (TL) and Optically Stimulated Luminescence (OSL) data for MgB4O7:Ce,Li glass samples used in the associated publication: Y. Kitagawa, E. G. Yukihara and S. Tanabe. "Development of Ce3+ and Li+ co-doped magnesium borate glass ceramics for optically stimulated luminescence dosimetry". J. Lumin. 232, 117847 (2021).
DOI: 10.17632/b7bc9y232m
title: Data Acquired by a Single Object Sensor (IMU) of Table Tennis Forehand Strokes

description: The sensory data were collected from a total of 16 Table Tennis players mixed gender, aged between 19 and 38 years, who used the IMU mounted Racket. We considered the Basic, Topspin, and Push as the sample type of performed Forehand strokes. The Table Tennis Forehand strokes quality evaluation values were collected from a total of 3 Table Tennis highly educated and ranked coaches who manually scored the performed strokes based on the experiment evaluation metrics. The players used the IMU mounted racket when samples were collecting. Each subject's performance was evaluated, scored, and labeled by the coaches who placed around Table Tennis's table. Acquiring simultaneously by the Racket, the strokes' evaluation metrics values, and their labels, each player carried out a predetermined stroke performing protocols when data was gathering. Capturing order of the samples are: 1) the players started performing strokes, 2) paused for five seconds by the coaches at the end of each stroke performing, 3) stored the sensory data by the software into a single CSV file, 4) labeled and scored the players' performance by the coaches manually.
DOI: 10.6084/m9.figshare.23101466.v2
title: Dataset peruvian athletes.csv

description: Data from a cross-sectional study with an analytical component to evaluate amateur athletes who practiced table tennis, basketball, and athletics and are part of the Peruvian Sports Institute of the district of Ica. Between October and November 2018, we evaluated 130 athletes selected for convenience, in continuous activity, and who practice sports such as tennis, basketball, and athletics.
DOI: 10.6084/m9.figshare.23650551.v1
title: Cashew Env. Dataset.csv

description: The dataset has remote sensing from POWER|DAVe, MODIS, MoFA (Crop production), GMet (Environmental Parameters)
DOI: 10.6084/m9.figshare.3526244.v1
title: Supplement 1. A date file of summary statistics of the population dynamics data set.

description: File List statistics.txt Description Summary statistics of population dynamics data set of 1198 species given as a database that can be opened with Excel, showing common name, hierarchical phylogeny, study length, the AIC model weights for each candidate population model and total strength of evidence for density dependence, the null hypothesis test results for density dependence, and AIC and cross-validation tests for lagged density dependence.
DOI: 10.17632/ts852v3fnb
title: Data for: Weight Gains from Trade in Foods: Evidence from Mexico

description: Codes and data for replication. Readme PDF files with instructions.
DOI: 10.4121/uuid:e30ba0c8-0039-4835-a493-6e3aa2301d3f
title: BPI Challenge 2016: Complaints

description: BPI Challenge 2016. This particular file contains the activity log for Complaints. Parent item: BPI Challenge 2016 UWV (Employee Insurance Agency) is an autonomous administrative authority (ZBO) and is commissioned by the Ministry of Social Affairs and Employment (SZW) to implement employee insurances and provide labour market and data services in the Netherlands. The Dutch employee insurances are provided for via laws such as the WW (Unemployment Insurance Act), the WIA (Work and Income according to Labour Capacity Act, which contains the IVA (Full Invalidity Benefit Regulations), WGA (Return to Work (Partially Disabled) Regulations), the Wajong (Disablement Assistance Act for Handicapped Young Persons), the WAO (Invalidity Insurance Act), the WAZ (Self-employed Persons Disablement Benefits Act), the Wazo (Work and Care Act) and the Sickness Benefits Act. The data in this collection pertains to customer contacts over a period of 8 months and UWV is looking for insights into their customers' journeys. Data has been collected from several different sources, namely: 1) Clickdata from the site www.werk.nl collected from visitors that were not logged in, 2) Clickdata from the customer specific part of the site www.werk.nl (a link is made with the customer that logged in), 3) Werkmap Message data, showing when customers contacted the UWV through a digital channel, 4) Call data from the callcenter, showing when customers contacted the call center by phone, and 5) Complaint data showing when customers complained. All data is accompanied by data fields with anonymized information about the customer as well as data about the site visited or the contents of the call and/or complaint. The texts in the dataset are provided in both Dutch and English where applicable. URL's are included based on the structure of the site during the period the data has been collected. UWV is interested in insights on how their channels are being used, when customers move from one contact channel to the next and why and if there are clear customer profiles to be identified in the behavioral data. Furthermore, recommendations are sought on how to serve customers without the need to change the contact channel.
DOI: 10.6084/m9.figshare.11952576.v1
title: MS1-Matrix-NEG

description: MS1 negative Matrix data for rmwf(Reproducilble Metabolomics WorkFlow) package.
DOI: 10.6084/m9.figshare.21586716.v1
title: Supplementary data Bodoni AF.docx

description: <strong>Background</strong>: Nicotinamide nucleotide transhydrogenase (NNT) acts as an antioxidant defense mechanism. NNT mutations cause familial glucocorticoid deficiency (FGD). How impaired oxidative stress disrupts adrenal steroidogenesis remains poorly understood. <strong>Objective:</strong> To ascertain the role played by NNT in adrenal steroidogenesis. <strong>Methods</strong>: The genotype-phenotype association of a novel pathogenic <em>NNT</em> variant was evaluated in a boy with FGD. Under basal and oxidative stress (OS) induced conditions, transient cell cultures of the patient’s and controls wild type (WT) mononuclear blood cells were used to evaluate antioxidant mechanisms and mitochondrial parameters [reactive oxygen species (ROS) production, reduced glutathione (GSH), and mitochondrial mass]. Using CRISPR/Cas9, a stable <em>NNT</em> gene knockdown model was built in H295R adrenocortical carcinoma cells to determine the role played by NNT in mitochondrial parameters and steroidogenesis. NNT immunohistochemistry was assessed in fetal and post-natal human adrenals. <strong>Results</strong>: The homozygous NNT p.G866D variant segregated with the FGD phenotype. Under basal and OS conditions, p.G866D homozygous mononuclear blood cells exhibited increased ROS production, and decreased GSH levels and mitochondrial mass when compared to WT NNT cells. In line, H295R<em> NNT</em> knocked-down cells presented impaired NNT protein expression, increased ROS production, decreased the mitochondrial mass, as well as the size and the density of cholesterol lipid droplets. <em>NNT</em> knockdown affected steroidogenic enzyme expression, impairing cortisol and aldosterone secretion. In human adrenals, NNT is abundantly expressed in the transition fetal zone and in zona fasciculata. <strong>Conclusion</strong>: Together, these studies demonstrate the essential role of NNT in adrenal redox homeostasis and steroidogenesis.
DOI: 10.6084/m9.figshare.26063020.v1
title: Data

description: Metadata file: it´s a csv format file with clinical information from patients.Data_pseq: it´s a phyloseq object with OTUs, taxonomic and clinical information of the cohort of patients.
DOI: 10.17632/6c2htvh94h
title: Data for: A symmetric alternating minimization algorithm for total variation minimization

description: A symmetric alternating minimization algorithm for total variation minimization.
DOI: 10.17632/hfg4w9hvsw
title: 3D geometry of calcite crystal during dissolution

description: This repository release contains details of chemical analyses of the aqueous samples and the 3D imaging research data in the manuscript by Noiriel et al. (2020) published by Geochimica et Cosmochimica Acta as " Examination of crystal dissolution in 3D: a way to reconcile dissolution rates in the laboratory?", https://doi.org/10.1016/j.gca.2020.01.003 The Excel table corresponds to the chemical analyses of Ca2+ and pH at the inlet and outlet of the reactor during the crystal dissolution experiments The 3D imaging data correspond to the 3D crystal geometry of the sub-sampled volumes after processing at different dissolution stages of the experiment (t0 to t3). The format is 8bit binary, stored into a 1D array, with no header, and the size (x,y,z) is included in the file name. The crystal is set to 1 and the air to 0. The size of each file is about 1.6 Gb.
DOI: 10.6084/m9.figshare.1591801.v1
title: Data for manuscript entitled "Context-dependent diversity-effects of seaweed consumption on coral reefs in Kenya"

description: Data for manuscript entitled "Context-dependent diversity-effects of seaweed consumption on coral reefs in Kenya" submitted to PLOS ONE.
DOI: 10.6084/m9.figshare.21369810.v5
title: “Until the Dawn: The Impact of COVID-19.”

description: <strong>Everyday Experiences of People Living with COVID-19 During the Pandemic in Thailand</strong>
DOI: 10.6084/m9.figshare.21936459.v1
title: Dataset S3 v2 (Figshare). ATP synthase core subunit, inhibitor, and assembly factor FASTA files.

description: Sequences from solved structures were used to conduct BLAST and HMMER searches into 219 organisms from the EukProt v3 database and tBLASTn queries into the NCBI TSA, WGS, and SRA databases. These hits were verified via reciprocal BLAST, phmmer, HHpred, Phyre2, SWISS-MODEL, and AlphaFold.