cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12792056.v2
title: profiles light FFM

description: p { margin-bottom: 0.1in; line-height: 120% } oxygen concentration profiles were measured with a clark-type oxygen microsensor (tip diameter : 10 um, Unisense). Several profiles were taken in precise x,y positions of the biofilm, especially in the center of biofilm structures. Each x,y (labeled with an <i>id</i>) position was sampled in both light and dark, hence light park profiles are coupled by their position, which is reported in the metadata files. Light and dark profiles are coupled in the file "Tables/Ph-Res_profiles_data_all_coords.csv". The raw OCT scans are in "OCT raw scans/ profiles/", and relative DEMs are in "DEMs/profiling_*"
DOI: 10.6084/m9.figshare.12792092.v1
title: profiles dark SFM

description: p { margin-bottom: 0.1in; line-height: 120% } oxygen concentration profiles were measured with a clark-type oxygen microsensor (tip diameter : 10 um, Unisense). Several profiles were taken in precise x,y positions of the biofilm, especially in the center of biofilm structures. Each x,y (labeled with an <i>id</i>) position was sampled in both light and dark, hence light park profiles are coupled by their position, which is reported in the metadata files. Light and dark profiles are coupled in the file "Tables/Ph-Res_profiles_data_all_coords.csv". The raw OCT scans are in "OCT raw scans/ profiles/", and relative DEMs are in "DEMs/profiling_*"
DOI: 10.6084/m9.figshare.12792059.v2
title: Wind120

description: https://podaac-tools.jpl.nasa.gov/drive/files/allData/cygnss/L2/cdr_v1.0/2018/120
DOI: 10.6084/m9.figshare.12792050.v1
title: profiles dark FFM

description: p { margin-bottom: 0.1in; line-height: 120% } oxygen concentration profiles were measured with a clark-type oxygen microsensor (tip diameter : 10 um, Unisense). Several profiles were taken in precise x,y positions of the biofilm, especially in the center of biofilm structures. Each x,y (labeled with an <i>id</i>) position was sampled in both light and dark, hence light park profiles are coupled by their position, which is reported in the metadata files. Light and dark profiles are coupled in the file "Tables/Ph-Res_profiles_data_all_coords.csv". The raw OCT scans are in "OCT raw scans/ profiles/", and relative DEMs are in "DEMs/profiling_*"
DOI: 10.6084/m9.figshare.12792056.v1
title: profiles light FFM

description: p { margin-bottom: 0.1in; line-height: 120% } oxygen concentration profiles were measured with a clark-type oxygen microsensor (tip diameter : 10 um, Unisense). Several profiles were taken in precise x,y positions of the biofilm, especially in the center of biofilm structures. Each x,y (labeled with an <i>id</i>) position was sampled in both light and dark, hence light park profiles are coupled by their position, which is reported in the metadata files. Light and dark profiles are coupled in the file "Tables/Ph-Res_profiles_data_all_coords.csv". The raw OCT scans are in "OCT raw scans/ profiles/", and relative DEMs are in "DEMs/profiling_*"
DOI: 10.6084/m9.figshare.12792059.v1
title: Wind122

description: https://podaac-tools.jpl.nasa.gov/drive/files/allData/cygnss/L2/cdr_v1.0/2018/122
DOI: 10.6084/m9.figshare.12792032
title: profiles light SFM

description: p { margin-bottom: 0.1in; line-height: 120% } oxygen concentration profiles were measured with a clark-type oxygen microsensor (tip diameter : 10 um, Unisense). Several profiles were taken in precise x,y positions of the biofilm, especially in the center of biofilm structures. Each x,y (labeled with an <i>id</i>) position was sampled in both light and dark, hence light park profiles are coupled by their position, which is reported in the metadata files. Light and dark profiles are coupled in the file "Tables/Ph-Res_profiles_data_all_coords.csv". The raw OCT scans are in "OCT raw scans/ profiles/", and relative DEMs are in "DEMs/profiling_*"
DOI: 10.6084/m9.figshare.12792050.v3
title: profiles dark FFM

description: p { margin-bottom: 0.1in; line-height: 120% } oxygen concentration profiles were measured with a clark-type oxygen microsensor (tip diameter : 10 um, Unisense). Several profiles were taken in precise x,y positions of the biofilm, especially in the center of biofilm structures. Each x,y (labeled with an <i>id</i>) position was sampled in both light and dark, hence light park profiles are coupled by their position, which is reported in the metadata files. Light and dark profiles are coupled in the file "Tables/Ph-Res_profiles_data_all_coords.csv". The raw OCT scans are in "OCT raw scans/ profiles/", and relative DEMs are in "DEMs/profiling_*"
DOI: 10.6084/m9.figshare.12792050.v2
title: profiles dark FFM

description: p { margin-bottom: 0.1in; line-height: 120% } oxygen concentration profiles were measured with a clark-type oxygen microsensor (tip diameter : 10 um, Unisense). Several profiles were taken in precise x,y positions of the biofilm, especially in the center of biofilm structures. Each x,y (labeled with an <i>id</i>) position was sampled in both light and dark, hence light park profiles are coupled by their position, which is reported in the metadata files. Light and dark profiles are coupled in the file "Tables/Ph-Res_profiles_data_all_coords.csv". The raw OCT scans are in "OCT raw scans/ profiles/", and relative DEMs are in "DEMs/profiling_*"
DOI: 10.6084/m9.figshare.12792032.v2
title: profiles light SFM

description: p { margin-bottom: 0.1in; line-height: 120% } oxygen concentration profiles were measured with a clark-type oxygen microsensor (tip diameter : 10 um, Unisense). Several profiles were taken in precise x,y positions of the biofilm, especially in the center of biofilm structures. Each x,y (labeled with an <i>id</i>) position was sampled in both light and dark, hence light park profiles are coupled by their position, which is reported in the metadata files. Light and dark profiles are coupled in the file "Tables/Ph-Res_profiles_data_all_coords.csv". The raw OCT scans are in "OCT raw scans/ profiles/", and relative DEMs are in "DEMs/profiling_*"
DOI: 10.6084/m9.figshare.12792032.v1
title: profiles light SFM

description: p { margin-bottom: 0.1in; line-height: 120% } oxygen concentration profiles were measured with a clark-type oxygen microsensor (tip diameter : 10 um, Unisense). Several profiles were taken in precise x,y positions of the biofilm, especially in the center of biofilm structures. Each x,y (labeled with an <i>id</i>) position was sampled in both light and dark, hence light park profiles are coupled by their position, which is reported in the metadata files. Light and dark profiles are coupled in the file "Tables/Ph-Res_profiles_data_all_coords.csv". The raw OCT scans are in "OCT raw scans/ profiles/", and relative DEMs are in "DEMs/profiling_*"
DOI: 10.6084/m9.figshare.12791966
title: Species (genome) tree and alignment

description: This compressed directory contains two files: the phylip-formatted alignment of concatenated single-copy genes used to generate the species tree, and the RAxML bipartitions newick file from the species tree (including support values).
DOI: 10.6084/m9.figshare.12791966.v1
title: Species (genome) tree and alignment

description: This compressed directory contains two files: the phylip-formatted alignment of concatenated single-copy genes used to generate the species tree, and the RAxML bipartitions newick file from the species tree (including support values).
DOI: 10.6084/m9.figshare.12791933
title: c60.xyz

description: Fullerene.xyz
DOI: 10.6084/m9.figshare.12792029.v3
title: OCT raw scans - HR

description: OCT scans at two lateral resolutions (40 um, 40 um, 2.18 um <i>x,y,z</i> respectively, labeled LR) and (11.1 um ,11.1 um and 2.18 um, labeled HR) were taken every 3 days in a 15 days experiment. LR scans have dimension 250 x 250 x 1024 pixels and are contained in folders name large. HR scans are 900 x 900 x 1024 pixels and are contained in folders names B1 (for the FFM) and B5 (for the SFM). Both HR and LR scans covered a total volume of 10 mm x 10 mm x 2.2 mm. 66 x 3 low resolution (LR) scans covered an area of 0.4 m x 0.025 m in a tiled pattern. 3 x 3 high resolution (HR) scans were taken at the extremes of the same area of interest. Each scan (in .raw format) has a relative .json metadata file named accordingly. Files are labeled with the date and time of acquisition, while the last part of the file name identifies the tile. Days of biofilm development and replicate for each acquisition date are reported in the OCTScans_metadata.xls file.<br>
DOI: 10.6084/m9.figshare.12792029.v4
title: OCT raw scans - HR

description: OCT scans at two lateral resolutions (40 um, 40 um, 2.18 um <i>x,y,z</i> respectively, labeled LR) and (11.1 um ,11.1 um and 2.18 um, labeled HR) were taken every 3 days in a 15 days experiment. LR scans have dimension 250 x 250 x 1024 pixels and are contained in folders name large. HR scans are 900 x 900 x 1024 pixels and are contained in folders names B1 (for the FFM) and B5 (for the SFM). Both HR and LR scans covered a total volume of 10 mm x 10 mm x 2.2 mm. 66 x 3 low resolution (LR) scans covered an area of 0.4 m x 0.025 m in a tiled pattern. 3 x 3 high resolution (HR) scans were taken at the extremes of the same area of interest. Each scan (in .raw format) has a relative .json metadata file named accordingly. Files are labeled with the date and time of acquisition, while the last part of the file name identifies the tile. Days of biofilm development and replicate for each acquisition date are reported in the OCTScans_metadata.xls file.<br>
DOI: 10.6084/m9.figshare.12791759
title: Gene alignments

description: All trimmed gene alignments for all nitrogen-cycling genes included in this project. Genes were aligned with MUSCLE and trimmed with TrimAl. Other methods for gene identification are included in the accompanying manuscript.
DOI: 10.6084/m9.figshare.12791765
title: Gene trees

description: Bootstrapped gene trees for all nitrogen-cycling genes included in this study. Trees were generated using RAxML-NG with at least 1000 bootstraps or until bootstraps converged, as determined using an MRE-based convergence test as implemented within RAxML-NG, using a cutoff of 0.03.
DOI: 10.6084/m9.figshare.12791750
title: Chronogram generated with UGAM clock model and conservative calibration points

description: Chronogram generated with UGAM clock model and conservative calibration points using PhyloBays
DOI: 10.6084/m9.figshare.12791756
title: Chronogram generated with CIR clock model and conservative calibration points

description: Chronogram generated with CIR clock model and conservative calibration points generated using PhyloBayes
DOI: 10.6084/m9.figshare.12791759.v1
title: Gene alignments

description: All trimmed gene alignments for all nitrogen-cycling genes included in this project. Genes were aligned with MUSCLE and trimmed with TrimAl. Other methods for gene identification are included in the accompanying manuscript.
DOI: 10.6084/m9.figshare.12791747
title: List of genomes

description: List of all genomes and accession numbers used for this analysis.
DOI: 10.6084/m9.figshare.12791750.v1
title: Chronogram generated with UGAM clock model and conservative calibration points

description: Chronogram generated with UGAM clock model and conservative calibration points using PhyloBays
DOI: 10.6084/m9.figshare.12791756.v1
title: Chronogram generated with CIR clock model and conservative calibration points

description: Chronogram generated with CIR clock model and conservative calibration points generated using PhyloBayes
DOI: 10.6084/m9.figshare.12790337
title: Complementary research data Comparative Analysis between the Quality of Life of Patients with Cervical Dystonia and Blepharospasm in Treatment with Botulinum Toxin

description: Dados de pesquisa complementar Análise comparativa entre a qualidade de vida de pacientes com distonia cervical e blefaroespasmo em tratamento com toxina botulínica
DOI: 10.6084/m9.figshare.12792029.v6
title: OCT raw scans - HR

description: OCT scans at two lateral resolutions (40 um, 40 um, 2.18 um <i>x,y,z</i> respectively, labeled LR) and (11.1 um ,11.1 um and 2.18 um, labeled HR) were taken every 3 days in a 15 days experiment. LR scans have dimension 250 x 250 x 1024 pixels and are contained in folders name large. HR scans are 900 x 900 x 1024 pixels and are contained in folders names B1 (for the FFM) and B5 (for the SFM). Both HR and LR scans covered a total volume of 10 mm x 10 mm x 2.2 mm. 66 x 3 low resolution (LR) scans covered an area of 0.4 m x 0.025 m in a tiled pattern. 3 x 3 high resolution (HR) scans were taken at the extremes of the same area of interest. Each scan (in .raw format) has a relative .json metadata file named accordingly. Files are labeled with the date and time of acquisition, while the last part of the file name identifies the tile. Days of biofilm development and replicate for each acquisition date are reported in the OCTScans_metadata.xls file.<br>
DOI: 10.6084/m9.figshare.12791747.v1
title: List of genomes

description: List of all genomes and accession numbers used for this analysis.
DOI: 10.6084/m9.figshare.12790337.v1
title: Complementary research data Comparative Analysis between the Quality of Life of Patients with Cervical Dystonia and Blepharospasm in Treatment with Botulinum Toxin

description: Dados de pesquisa complementar Análise comparativa entre a qualidade de vida de pacientes com distonia cervical e blefaroespasmo em tratamento com toxina botulínica
DOI: 10.5522/04/12790187
title: Genotypes of Collaborative Cross Mice

description: Genotypes of Collaborative Cross mice in HAPPY format. Compressed tar format file containing chromosome-specific genotype, alleles and map files
DOI: 10.5522/04/12790187.v1
title: Genotypes of Collaborative Cross Mice

description: Genotypes of Collaborative Cross mice in HAPPY format. Compressed tar format file containing chromosome-specific genotype, alleles and map files
DOI: 10.6084/m9.figshare.12792029
title: OCT raw scans - HR

description: OCT scans at two lateral resolutions (40 um, 40 um, 2.18 um <i>x,y,z</i> respectively, labeled LR) and (11.1 um ,11.1 um and 2.18 um, labeled HR) were taken every 3 days in a 15 days experiment. LR scans have dimension 250 x 250 x 1024 pixels. HR scans are 900 x 900 x 1024 pixels, andtheir filename contains B1 (for the FFM) and B5 (for the SFM). Both HR and LR scans covered a total volume of 10 mm x 10 mm x 2.2 mm each. 66 x 3 low resolution (LR) scans covered an area of 0.4 m x 0.025 m in a tiled pattern. 3 x 3 high resolution (HR) scans were taken at the extremes of the same area of interest. Each scan (in .raw format) has a relative .json metadata file named accordingly. Files are labeled with the date and time of acquisition, while the last part of the file name identifies the tile. Days of biofilm development and replicate for each acquisition date are reported in the OCTScans_metadata.xls file.<br>
DOI: 10.6084/m9.figshare.12790058
title: Tables

description: p { margin-bottom: 0.1in; line-height: 120% } This folder contains some processed data, such as the light:dark coupled profiles, characterization of the mrphological changes along the long axis of the LR large-scale DEMs and tracking of the displacement velocity estimated manually from the HR DEM stacks using ImageJ. <br>
DOI: 10.6084/m9.figshare.12789986
title: Data from: Warming effects on consumption and intraspecific interference competition depend on predator metabolism.

description: PredID simply codes for the two species.Poe is the beetle Poecilus versicolor and Pter is Pterostichus melanarius. temp is temperature (10 and 20° Celsius).PredNo the number of predators in the experiment.Initial the initial number of prey and Killed the number of prey still alive after 24 hours. Mass is the mean mass of predators in the experiment.~~~~~~~~~~~~~~~~~~~~~~~~1. Model analyses show that the stability of population dynamics and food web persistence increase with the strength of interference competition. Despite this critical importance for community stability, little is known about how external factors such as the environmental temperature affect intraspecific interference competition.2. We aimed to fill this void by studying the functional responses of two ground beetle species of different body size, Pterostichus melanarius and Poecilus versicolor. These functional response experiments were replicated across four predator densities and two temperatures to address the impact of temperature on intraspecific interference competition.3. We generally expected that warming should increase the speed of movement, encounter rates and in consequence interference among predator individuals. In our experiment, this expectation was supported by the results obtained for the larger predator, P. melanarius, whereas the opposite pattern characterized the interference behaviour of the smaller predator P. versicolor.4. These results suggest potentially nontrivial implications for the effects of environmental temperature on intraspecific interference competition, for which we propose an explanation based on the different sensitivity to warming of metabolic rates of both species. As expected, increasing temperature led to stronger interference competition of the larger species, P. melanarius, which exhibited a weaker increase in metabolic rate with increasing temperature. The stronger increase in the metabolic rate of the smaller predator, P. versicolor, had to be compensated by increasing searching activity for prey, which did not leave time for increasing interference.5. Together, these results suggest that any generalization how interference competition responds to warming should also take the species’ metabolic response to temperature increases into account.
DOI: 10.6084/m9.figshare.12789926
title: Turbulent Jet Flow Data

description: Velocity fields for axisymmetric jet flow at Reynolds number 21000-77900.
DOI: 10.6084/m9.figshare.12789833
title: Data_SpilloverEffects

description: This dataset can be used to study spillover effects. The variable superstar is a dummy which equals one if either had played against the future champion in its last match. Data still contains matches before and after weeks with international play (like the UEFA Champions League). Data was abstracted from www.football-data.co.uk and www.rsssf.com.<br>
DOI: 10.6084/m9.figshare.12789926.v1
title: Turbulent Jet Flow Data

description: Velocity fields for axisymmetric jet flow at Reynolds number 21000-77900.
DOI: 10.6084/m9.figshare.12789833.v1
title: Data_SpilloverEffects

description: This dataset can be used to study spillover effects. The variable superstar is a dummy which equals one if either had played against the future champion in its last match. Data still contains matches before and after weeks with international play (like the UEFA Champions League). Data was abstracted from www.football-data.co.uk and www.rsssf.com.<br>
DOI: 10.6084/m9.figshare.12789764
title: Output feedback controller for polytopic systems exploiting the direct searching of the design space

description: The dataset relates to the following paper:Abolpour, R., Dehghani, M. and Talebi, H.A., 2019. Output feedback controller for polytopic systems exploiting the direct searching of the design space. <i>International Journal of Robust and Nonlinear Control</i>, <i>29</i>(15), pp.5164-5177.<br>Summary: The paper deals with the problem of designing a robust static output feedback controller for polytopic systems. The current research that tackled this problemis mainly based on LMI method, which is conservative by nature. In this paper, a novel approach is proposed, which considers the design space of the controller parameters and iteratively partitions the space to small simplexes. Then, by assessing the stability in each simplex, the solution space for design parameters is directly determined. It has been theoretically proved that, if there exists a feasible solution in the design space, the algorithm can find it. To validate the result of the proposed approach, comparative simulation examples are given to illustrate the performance of the design methodology as compared to those of previous approaches.
DOI: 10.6084/m9.figshare.12789812
title: Supplemental File 5. Discharge and Follow-up Care Survey Dataset

description: Survey results from the Pediatric Discharge and Follow-up Care study.
DOI: 10.6084/m9.figshare.12789764.v1
title: Output feedback controller for polytopic systems exploiting the direct searching of the design space

description: The dataset relates to the following paper:Abolpour, R., Dehghani, M. and Talebi, H.A., 2019. Output feedback controller for polytopic systems exploiting the direct searching of the design space. <i>International Journal of Robust and Nonlinear Control</i>, <i>29</i>(15), pp.5164-5177.<br>Summary: The paper deals with the problem of designing a robust static output feedback controller for polytopic systems. The current research that tackled this problemis mainly based on LMI method, which is conservative by nature. In this paper, a novel approach is proposed, which considers the design space of the controller parameters and iteratively partitions the space to small simplexes. Then, by assessing the stability in each simplex, the solution space for design parameters is directly determined. It has been theoretically proved that, if there exists a feasible solution in the design space, the algorithm can find it. To validate the result of the proposed approach, comparative simulation examples are given to illustrate the performance of the design methodology as compared to those of previous approaches.
DOI: 10.6084/m9.figshare.12789812.v2
title: Supplemental File 5. Discharge and Follow-up Care Survey Dataset

description: Survey results from the Pediatric Discharge and Follow-up Care study.