cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pabwfd
title: Occurrence Download

description: A dataset containing 150 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Festuca sinensis"
 ]
}

 The dataset includes 150 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011159-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/a3cnlo
title: Methanogens and iron-reducing bacteria are major contributors to mercury methylation in boreal lake sediments

description: Methylmercury is a potent human neurotoxin easily biomagnified in aquatic food webs. Anaerobic microorganisms containing the hgcA gene potentially mediate the formation of methylmercury in natural environments, but the diversity of microbial mercury methylating communities in the environment remains largely unexplored. The diversity of mercury methylating microbial communities in boreal lake sediments, encompassing a wide range of mercury methylation rates, was characterized using barcoded amplification and high throughput sequencing of 16S rRNA and hgcA genes. Previously, most studies in aquatic ecosystems have implicated sulphate-reducing bacteria as the main mercury methylators. Here we demonstrate that Methanomicrobiales contribute significantly to the hgcA gene pool in boreal lake sediments. Experimental mercury isotope tracer incubations confirmed that, while sulphate-reducers contribute to mercury methylation, methanogens and iron reducers are also quantitatively important for the process. Our results change the way we perceive the local and global diversity of mercury methylating microbial communities in boreal lake sediments and call for further studies on the environmental factors regulating mercury methylation.
DOI: 10.15468/dl.fpchdt
title: Occurrence Download

description: A dataset containing 344 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Mytella strigata"
 ]
}

 The dataset includes 344 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011155-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/wasgny
title: sediment metagenome Metagenome

description: Ecological effects assessments of spilled oils
DOI: 10.15468/dl.a7pvpk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Aglaonema immaculatum)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011161-250920141307145/datasets/export for details.
DOI: 10.15468/ycwx58
title: Annual Dynamics of Bacterial & Archaeal Communities in the East Greenland Current (2019-2020)

description: 16S rRNA amplicon sequences derived from autonomous sampling in the East Greenland Current (mooring EGC-6).
DOI: 10.15468/7awkpg
title: Submarine Ligurian Canyons Water Prokaryotic and Protist Communities

description: Planktonic prokaryote communities in a submarine canyon system in the Ligurian Sea (NW Mediterranean)
DOI: 10.5281/zenodo.17189867
title: Example datasets used in contextual latent world models for offline meta reinforcement learning
DOI: 10.5281/zenodo.17189868
title: Example datasets used in contextual latent world models for offline meta reinforcement learning
DOI: 10.15468/kfelij
title: A diverse and metabolically active microbial community persists in deep subsurface clay borehole water

description: The Boom Clay layer in Belgium is investigated in the context of subsurface nuclear waste storage, making use of the underground laboratory HADES. The HADES facility offers a rather unique access to a subsurface microbial community, in an environment of which all geological and geochemical characteristics are being thoroughly studied. This study presents the first elaborate description of a subsurface clay microbial community, residing in Boom Clay borehole water. Using an integrated approach of microscopy, metagenomics, activity screening and cultivation, the presence and activity of this community is disclosed. Despite the low energy environment, the microscopy and molecular analyses show a surprisingly large bacterial diversity and richness, tending to correlate positively with the organic matter content of the environment. Among different samples, a core bacterial community comprising seven bacterial phyla is defined, including both aerobic and anaerobic genera with a range of metabolic preferences. In addition, when using the appropriate media, a considerably large fraction of this community is found cultivable, active in situ and matching the metagenomic data. In conclusion, this study shows the possibility of a microbial community of relative complexity to actively persist in subsurface Boom Clay.
DOI: 10.21227/aq0s-z090
title: "DACL: A Contrastive Judgment Framework for Event Causality Identification Dataset"

description: "Dataset"
DOI: 10.34740/kaggle/ds/7143222
title: 🌇🇵🇭Philippine Standard Geographic Codes Q4 2024
DOI: 10.15468/tah7ev
title: Sediment sample Metagenome

description: Given the complexity in microbial transformation of arsenic in deep aquifer sediment, we aim to shade light of indigenous bacterial community structure in arsenic-enriched deep aquifer sediment and how the communities changes under controlled redox condition favoring reductive dissolution and release of arsenic from the sediment.
DOI: 10.15468/dupatk
title: Patagonian fjord prokaryote community

description: Time series of prokaryote community composition in waters of a Patagonian fjord
DOI: 10.48505/nims.5776
title: Quantifying the Thresholds of the Phospholipid Surface Density for Nonspecific Protein Adsorption and Desorption at the Triacylglycerol/Water Interface

description: Quantitative investigation of protein adsorption and desorption at triacylglycerol/water interfaces is of great importance for understanding the properties and functions of intracellular lipid droplets. In this study, we investigated the adsorption and desorption of cytochrome c, lysozyme, and bovine serum albumin at the tricaprylin/water interface covered with 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC) using a surface pressure measurement system and a pendant drop tensiometer. The aim of this study was to understand the quantitative relationships between the area per DOPC molecule and the protein adsorption and desorption. We found that the area per DOPC molecule required to preclude bovine serum albumin adsorption was much smaller than that required to preclude the adsorption of cytochrome c or lysozyme. However, the area per DOPC molecule required for all of the bound protein molecules to desorb from the interface was independent of the type of protein, and this threshold area per DOPC molecule was in good agreement with an area per lipid value previously reported for fully hydrated DOPC bilayers.
description: Langmuir. 41 [37] (2025)25431-25438
DOI: 10.15468/dl.qppmzq
title: Occurrence Download

description: A dataset containing 26576 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tectona grandis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 26576 records from 246 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011163-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/c5mt5n
title: Microbial communities (Bacteria, Eukaryotes and Fungi) in Arctic, Antarctic and Sub-Antarctic lacustrine biofilms

description: Amplicon sequencing (Illumina MiSeq, 300bp Paired-end) dataset of microbial mats samples collected in the literal zone of Arctic, Antarctic and Sub-Antarctic lakes. Samples were taken during the course of field expeditions between 1993 and 2014. Sequencing targeted Bacteria (16S ssu rRNA marker gene, v1-v3 region), eukaryotes (18S ssu rRNA, v4 region) and microbial fungi (ITS marker gene)
DOI: 10.15468/dl.uf7nzs
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pterostyrax hispidus",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011164-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/xgdqeb
title: Microbial Diversity in the Southwest Atlantic Ocean and Patagonian Freshwater Bodies

description: The Southwest Atlantic Ocean (SAO) has one of the largest and most productive continental shelves of the World, notwithstanding which microbiological studies of this region are rather scarce. Likewise, the majority of Continental Patagonian (CP) lakes, rivers and other water bodies remain as pristine as microbiologically unstudied. This project constitutes an initiative aimed to contribute to surveying, systematizing and understanding the dynamics (i.e. ecology and evolution) of microbial communities from this region.
DOI: 10.15468/dl.xv3nja
title: Occurrence Download

description: A dataset containing 5247 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Geometry POLYGON((-61.9138 11.88953,-60.57762 11.88953,-60.57762 14.0853,-60.92897 14.15708,-61.9138 14.0853,-61.9138 11.88953))",
 "Geometry POLYGON((-63.63727 17.01546,-62.36471 17.01546,-62.36471 18.20836,-62.98043 18.36656,-63.63727 18.20836,-63.63727 17.01546))",
 "Geometry POLYGON((-66.85545 11.72121,-66.49496 11.72121,-66.49496 12.0039,-66.85545 12.0039,-66.85545 11.72121))"
 ]
 },
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Porites astreoides, Montastraea cavernosa, Siderastrea siderea, Siderastrea radians, Agaricia agaricites, Stephanocoenia intersepta, Manicina areolata, Colpophyllia natans, Pseudodiploria strigosa, Diploria labyrinthiformis, Meandrina meandrites, Eusmilia fastigiata, Dichocoenia stokesii, Porites porites, Porites furcata, Orbicella annularis, Orbicella faveolata, Orbicella franksi, Pseudodiploria clivosa, Isophyllia sinuosa, Isophyllia rigida, Mycetophyllia aliciae, Mycetophyllia ferox, Mycetophyllia lamarckiana, Scolymia cubensis, Scolymia lacera, Agaricia tenuifolia, Agaricia lamarcki, Agaricia humilis, Porites divaricata, Madracis auretenra, Madracis decactis, Porites colonensis, Acropora palmata, Acropora cervicornis, Dendrogyra cylindrus, Meandrina jacksoni, Solenastrea bournoni, Solenastrea hyades, Favia fragum, Agaricia grahamae, Helioseris cucullata, Madracis carmabi, Porites branneri, Oculina diffusa)"
 ]
}

 The dataset includes 5247 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011165-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/g99bmf
title: Amplicon 18S rRNA Illumina TAGs from Malaspina Bathypelagic samples

description: Bathypelagic samples collected during the global
circumnavigation Expedition Malaspina 2010 were generated by
amplifying the 18S rRNA gene
using primers XXXXX and XXXX. Sequencing was performed in an Illumina
MiSeq platform (iTAGs) using 2x250 bp paired-end approach at
Genoscope. The data generated has been used mainly to describe the
eukaryotic diversity from bathypelagic samples and describe its
biogeography.
DOI: 10.15468/dl.v4qyvs
title: Occurrence Download

description: A dataset containing 1275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Carex dimorpholepis"
 ]
}

 The dataset includes 1275 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011167-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/ppva11
title: Diversity and population structure of Marine Group A in the oxygen minimum zone of the Northeast subarctic Pacific Ocean

description: NONE
DOI: 10.15468/dl.3kfkug
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-96.80698826051602 17.36139582506845,-93.11846367035207 17.36139582506845,-93.11846367035207 21.0499204152324,-96.80698826051602 21.0499204152324,-96.80698826051602 17.36139582506845))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chaetodon ocellatus"
 ]
}

 The dataset includes 170 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011166-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/hd4vmn
title: Annual Dynamics of Bacterial & Archaeal Communities in the East Greenland Current (2018-2019)

description: 16S rRNA amplicon sequences derived from autonomous sampling in the East Greenland Current (mooring EGC-5).
DOI: 10.15468/c2wo4g
title: XRCWD sediment metagenome Metagenome

description: To investigate the influence of wetland types on the composition and structure of microbial communities.
DOI: 10.5281/zenodo.17190198
title: INTEGRATION OF THE AYOZQAL'A MONUMENT INTO TOURISM THROUGH MUSEUMIFICATION AND DIGITALIZATION
DOI: 10.5281/zenodo.17190199
title: INTEGRATION OF THE AYOZQAL'A MONUMENT INTO TOURISM THROUGH MUSEUMIFICATION AND DIGITALIZATION
DOI: 10.15468/4mz8g8
title: LMO 2016, 2017 (0.2, 3-0.2, 3)

description: Bacterial (and some archaeal) V3V4 sequences collected at the Linnaeus Microbial Observatory (LMO) in the Baltic Sea 2016-17 using three different filter setups: directly on 0.2 um, on 0.2 um after prefiltering with a 3 um filter and directly on a 3 um filter.
DOI: 10.15468/7newve
title: Fringing reef Metagenome

description: This study used 16S and 18S rRNA genes pyrosequencing derived metagenomic DNA to obtain the microbial profiles of a marine tropical reef surface of Kham island, Trat province, Thailand
DOI: 10.5281/zenodo.17153294
title: Redox Dynamics of Co3O4(111) during H2S Adsorption and Decomposition: A Synchrotron Radiation Photoelectron Spectroscopy Study

description: Synchrotron Radiation Photoelectron Spectroscopy dataset, H2S adsorption and decomposition on Co3O4(111)/Ir(100).
DOI: 10.5281/zenodo.17153295
title: Redox Dynamics of Co3O4(111) during H2S Adsorption and Decomposition: A Synchrotron Radiation Photoelectron Spectroscopy Study

description: Synchrotron Radiation Photoelectron Spectroscopy dataset, H2S adsorption and decomposition on Co3O4(111)/Ir(100).
DOI: 10.15468/ibkars
title: the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays

description: Contribution of selective and neutral processes to the assembly of abundant and rare bacterioplankton subcommunities
DOI: 10.15468/dl.n9s7n8
title: Occurrence Download

description: A dataset containing 120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rattus rattus",
 "Year 2005-2025"
 ]
}

 The dataset includes 120 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011170-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/zzxsbl
title: Marine protists Metagenome

description: A study of the genetic diversity of protists in the central Arctic Ocean in late summer 2011.
DOI: 10.5281/zenodo.17189085
title: Heavy precipitation-induced Yangtze River runoff greatly regulates heterotrophic prokaryotes production and induces P-limited growth in the northern East China Sea

description: To elucidate the impact of Yangtze River Diluted Water (YRDW) on Heterotrophic prokaryotes production (HPP) and growth-limiting resources, we conducted comprehensive microbial oceanographic measurements from 2020 to 2022, integrating satellite image analysis and optical property measurements of dissolved organic carbon (DOC) in the northern East China Sea (31.5-32.5°N, 124.5-127.1°E).

Seawater samples were collected on board. Limiting resources assay were conducted on board. DOC, fluorescent dissolved organic matter, prokaryotes abundance (PA), heterotrophic prokaryotes production (HPP) and primary production (PP) of seawater were analyzed.

Please refer to the attached dataset template for further details.
DOI: 10.15468/x2tqku
title: Sea water sample Targeted Locus (Loci)

description: Study of spatial and temporal variation in marine bacterial communities.
DOI: 10.15468/dl.pdwqk2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aeschynomene americana",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011172-250920141307145/datasets/export for details.
DOI: 10.15468/dl.nmqw7b
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aeschynomene americana",
 "Country is Lao People’s Democratic Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011173-250920141307145/datasets/export for details.
DOI: 10.15468/m29jve
title: Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns

description: Atlantis II and Discovery are two hydrothermal and hypersaline deep-sea pools in the Red Sea rift that are characterised by strong thermo-halo stratification and temperatures steadily peaking near the bottom. We conducted comprehensive vertical profiling of the microbial populations in both pools and highlighted the influential environmental factors. Pyrosequencing of the 16S ribosomal RNA genes (rRNA genes) revealed shifts in community structures vis-à-vis depth. High diversity and low abundance were the features of the deepest convective layers despite the low cell density. Surprisingly, the brine interfaces were significantly higher in cell count, compared with the overlying deep-sea water, yet they were lowest in diversity. Vertical stratification of the bacterial populations was apparent as we move from the Alphaproteobacteria-dominated deep-sea to the Planctomycetacia or Deferribacteres-dominated interfaces to the Gammaproteobacteria-dominated brine layers. The archaeal marine group I was dominant in the deep-sea water and interfaces; whilst several euryarchaeotic groups increased in the brine. Across sites, microbial phylotypes and abundances varied substantially in the brine interface of Discovery compared with Atlantis II; despite the near-identical populations in the overlaying deep-sea waters. The lowest convective layers harboured interestingly similar microbial communities, even though temperature and heavy metal concentrations were very different. Multivariate analysis indicated that temperature and salinity were the major influences shaping the communities. The harsh conditions and the low-abundance phylotypes could explain the observed correlation in the brine pools.
DOI: 10.15468/dl.g7qjkf
title: Occurrence Download

description: A dataset containing 19799 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Terminalia catappa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 19799 records from 425 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011174-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mt6nqx
title: Occurrence Download

description: A dataset containing 8562 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((16.71992688954859 48.27043260711093, 16.854595659442044 48.26213968728716, 16.866947139711268 48.35270339993142, 16.732039199959445 48.36101350356407, 16.71992688954859 48.27043260711093))"
 ]
}

 The dataset includes 8562 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014915-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/1jnxpq
title: Chauffour_Nat Com 2024_README.txt

description: :unav
DOI: 10.57745/lanuno
title: Chauffour_Nat Com 2024_Unprecedented in vivo activity of telacebec.ods

description: :unav
DOI: 10.17632/55xt57vtwg.1
title: Socio-economic and goat management data from smallholder surveys in Botswana

description: The attached spreadsheet includes data from a two-stage survey of smallholder farmers in the Central District Botswana. The survey questions are also attached.

The first stage is a cross-sectional survey (n = 787) which covers elements of household food security, household income sources, livestock owned, assets owned, structure of goat herds, and aspects of goat management such as off-take, mortality, veterinary treatments.

The second stage is a semi-structured survey (n = 44). This was completed by a sub-section of goat owning respondents from the cross-sectional survey. This delved deeper into aspects of goat management and health. It explores more specific areas of husbandry, feeding, veterinary care, and animal health.

The dataset consists of 229 columns, each pertaining to an individual question or component of a question.

Some answers are redacted for anonymity.
DOI: 10.5281/zenodo.18027982
title: Colletes americanus	NCSU_0026013
DOI: 10.5281/zenodo.18027983
title: Colletes americanus	NCSU_0026013
DOI: 10.15468/dl.sp66cu
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lychnophora candelabrum Sch.Bip."
 ]
}

 The dataset includes 67 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021423-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d8z72w
title: Occurrence Download

description: A dataset containing 19603 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Smilisca baudinii (Duméril & Bibron, 1841)"
 ]
}

 The dataset includes 19603 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021422-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14036840
title: amphiesma_stolatum_spades_01.fasta.gz
DOI: 10.5281/zenodo.14036841
title: amphiesma_stolatum_spades_01.fasta.gz