cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/3vjd66g9gc.1
title: Healing as a Determinant of Quality of Life in Individuals with Venous Leg Ulcers: A Quasi-Experimental Clinical Study

description: Objective: This study aims to assess the impact of healing Venous Leg Ulcers (VLU) on Quality of Life (QoL) in patients receiving primary healthcare in Brazil. Method: An observational, longitudinal, quasi-experimental clinical trial was conducted with patients suffering from VLU, monitored in a specialized service for chronic wound treatment from August 2020 (T1) to November 2021 (T2). A non-probabilistic sample of individuals utilizing these services underwent follow-up consultations for at least one year, employing Unna boot compressive therapy as the treatment of choice. To measure the variables of interest, we utilized the Medical Outcomes Short-Form Health Survey (SF-36) and the Charing Cross Venous Ulcer Questionnaire (CCVUQ). The study groups were divided into the Healing Group (HG) and the Non-Healing Group (UG). Results: In the final sample of n=103 individuals, n=43 (41.7%) showed healing after one year of treatment (HG). Between T1 and T2, the UG exhibited improvement in SF-36 scores in the Social Functioning (n=45/ p&lt;0.001), Physical Functioning (n=33/ p=0.014), General Health (n=40/ p=0.001), and Pain (n=40/ p=0.001) domains, but worsened in the Emotional Aspects (n=40/ p&lt;0.001) and Physical Health Dimension (n=50/ p&lt;0.001). However, in the VLU-specific QoL assessment (CCVUQ), they deteriorated in the Aesthetic aspect (n=40/ p=0.009). The HG showed improvement in the SF-36 scores in Social Functioning (n=34/ p&lt;0.001), Physical Functioning (n=33/ p&lt;0.001), and Physical Health Dimension (n=38/ p&lt;0.001). With the CCVUQ assessment, there was an improvement in scores in the domains of Domestic Activities (n=30/ p=0.001) and Social Interaction (n=30/ p=0.009). Conclusion: QoL showed significant improvement in aspects related to functionality, physical performance, and social interaction in the HG after one year of compressive therapy treatment. The UG was the only group to exhibit significant deteriorations in QoL.
DOI: 10.17632/phgrnvykmr.1
title: 5+ Years of Multiple Time Series Data of Hourly PM2.5 Recordings Gathered from Various Sensors Located throughout Japan (1-1-2018 to 25-4-2023)

description: Air pollution is the major cause for many respiratory related deaths in Japan. The Ministry of Environment Japan has setup a nation-wide sensor network to monitor air pollution throughout Japan. This network is called Atmospheric Environmental Regional Observation System (AEROS). More information on this is available at https://soramame.env.go.jp/

Here, we are providing the hourly recordings of PM2.5 values by 1000+ sensors from 1-1-2018 to 25-4-2023 (5+ years). Please consider the value 9999 means missing data. According to Japanese norms, values greater than 15 ppm3 is consider unhealthy.



We are providing three files:
 a) station_info.csv : contains the station_id, address, and lat/long of the station
 b) ETL_DATA_final.csv: Contains the PM2.5 hourly data of various sensors.
 format of this data is: rowNumber,timestamp,sensor_1 values, sensor_2 values, ... 
 c) Soramame-key.pdf: Explains the process to convert this columnar multiseries data frame into a transactional database and extract patterns.

Citation:
Rage Uday Kiran, Pamalla Veena, Penugonda Ravikumar, Bathala Venus Vikranth Raj, Minh-Son Dao, Koji Zettsu, Sai Chithra Bommisetti:
HDSHUI-miner: a novel algorithm for discovering spatial high-utility itemsets in high-dimensional spatiotemporal databases. Appl. Intell. 53(8): 8536-8561 (2023)
DOI: 10.17632/hc8yg9c28b.1
title: LDHU3_02.0490

description: Hypothetical protein - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/2m9rcy3dr9.3
title: Cross Regional Eucalyptus Growth and Environmental Data

description: The dataset is provided in a single .xlsx file named "eucalyptus_growth_environment_data_V2.xlsx" and consists of fifteen sheets:

Codebook: This sheet details the index, values, and descriptions for each field within the dataset, providing a comprehensive guide to understanding the data structure.

ALL NODES: Contains measurements from all devices, totalling 102,916 data points. This sheet aggregates the data across all nodes.

GWD1 to GWD10: These subset sheets include measurements from individual nodes, labelled according to the abbreviation “Generic Wireless Dendrometer” followed by device IDs 1 through 10. Each sheet corresponds to a specific node, representing measurements from ten trees (or nodes).

Metadata: Provides detailed metadata for each node, including species, initial diameter, location, measurement frequency, battery specifications, and irrigation status. This information is essential for identifying and differentiating the nodes and their specific attributes. 

Missing Data Intervals: Details gaps in the data stream, including start and end dates and times when data was not uploaded. It includes information on the total duration of each missing interval and the number of missing data points.

Missing Intervals Distribution: Offers a summary of missing data intervals and their distribution, providing insight into data gaps and reasons for missing data.

All nodes utilize LoRaWAN for data transmission. Please note that intermittent data gaps may occur due to connectivity issues between the gateway and the nodes, as well as maintenance activities or experimental procedures.

Software considerations: The provided R code named “Simple_Dendro_Imputation_and_Analysis.R” is a comprehensive analysis workflow that processes and analyses Eucalyptus growth and environmental data from the "eucalyptus_growth_environment_data_V2.xlsx" dataset. The script begins by loading necessary libraries, setting the working directory, and reading the data from the specified Excel sheet. It then combines date and time information into a unified DateTime format and performs data type conversions for relevant columns. The analysis focuses on a specified device, allowing for the selection of neighbouring devices for imputation of missing data. A loop checks for gaps in the time series and fills in missing intervals based on a defined threshold, followed by a function that imputes missing values using the average from nearby devices. Outliers are identified and managed through linear interpolation. The code further calculates vapor pressure metrics and applies temperature corrections to the dendrometer data. Finally, it saves the cleaned and processed data into a new Excel file while conducting dendrometer analysis using the dendRoAnalyst package, which includes visualizations and calculations of daily growth metrics and correlations with environmental factors such as vapour pressure deficit (VPD).
DOI: 10.17632/dn865d6gpx.1
title: LDHU3_02.0470

description: UBC9 | Ubiquitin-conjugating enzyme E2; Leishmania donovani (HU3 strain)
DOI: 10.17632/2m9rcy3dr9.1
title: Cross Regional Eucalyptus Growth and Environmental Data

description: The dataset is provided in a single .xlsx file named "eucalyptus_growth_environment_data.xlsx" and consists of fifteen sheets:

Codebook: This sheet details the index, values, and descriptions for each field within the dataset, providing a comprehensive guide to understanding the data structure.

ALL NODES: Contains measurements from all devices, totalling 102,916 data points. This sheet aggregates the data across all nodes.

GWD1 to GWD10: These subset sheets include measurements from individual nodes, labelled according to the abbreviation “Generic Wireless Dendrometer” followed by device IDs 1 through 10. Each sheet corresponds to a specific node, representing measurements from ten trees (or nodes).

metadata: Provides detailed metadata for each node, including species, initial diameter, location, measurement frequency, battery specifications, and irrigation status. This information is essential for identifying and differentiating the nodes and their specific attributes. 

Missing Data Intervals: Details gaps in the data stream, including start and end dates and times when data was not uploaded. It includes information on the total duration of each missing interval and the number of missing data points.

Missing Intervals Distribution: Offers a summary of missing data intervals and their distribution, providing insight into data gaps and reasons for missing data.

All nodes utilize LoRaWAN for data transmission. Please note that intermittent data gaps may occur due to connectivity issues between the gateway and the nodes, as well as maintenance activities or experimental procedures.
DOI: 10.17632/2m9rcy3dr9.2
title: Cross Regional Eucalyptus Growth and Environmental Data

description: The dataset is provided in a single .xlsx file named "eucalyptus_growth_environment_data_V2.xlsx" and consists of fifteen sheets:

Codebook: This sheet details the index, values, and descriptions for each field within the dataset, providing a comprehensive guide to understanding the data structure.

ALL NODES: Contains measurements from all devices, totalling 102,916 data points. This sheet aggregates the data across all nodes.

GWD1 to GWD10: These subset sheets include measurements from individual nodes, labelled according to the abbreviation “Generic Wireless Dendrometer” followed by device IDs 1 through 10. Each sheet corresponds to a specific node, representing measurements from ten trees (or nodes).

Metadata: Provides detailed metadata for each node, including species, initial diameter, location, measurement frequency, battery specifications, and irrigation status. This information is essential for identifying and differentiating the nodes and their specific attributes. 

Missing Data Intervals: Details gaps in the data stream, including start and end dates and times when data was not uploaded. It includes information on the total duration of each missing interval and the number of missing data points.

Missing Intervals Distribution: Offers a summary of missing data intervals and their distribution, providing insight into data gaps and reasons for missing data.

All nodes utilize LoRaWAN for data transmission. Please note that intermittent data gaps may occur due to connectivity issues between the gateway and the nodes, as well as maintenance activities or experimental procedures.
DOI: 10.17632/db37csp3d8.1
title: Consumption measurements of the efficient water use project at the University of Ibagué campus

description: The available files correspond to the analysis of the water efficient use on the campus of the University of Ibagué in Colombia during a period of measurements of 6 semesters. In this case, measurements were taken before, during and after the implementation of an wáter efficient water use project as a strategy to reduce water consumption on campus, environmental sustainability, education and contribution to the United Nations Sustainable Development Goals.
DOI: 10.17632/fcjsf59zpt.1
title: HLA-E Restricted SARS-CoV-2 Specific T Cells from Convalescent COVID19 Patients Suppress Virus Replication Despite HLA Class Ia Downregulation

description: Raw sequencing data (FASTQ files) of the HLA-E-restricted, SARS-CoV-2-specific T cells reported in Yang et al (2023) "HLA-E Restricted SARS-CoV-2 Specific T Cells from Convalescent COVID19 Patients Suppress Virus Replication Despite HLA Class Ia Downregulation" Science Immunology, In press

ABSTRACT
Pathogen specific CD8+ T cell responses restricted by the non-polymorphic non-classical class Ib molecule HLA-E are rarely reported in viral infections. The natural HLA-E ligand is a signal peptide derived from classical class Ia HLA molecules that interacts with the NKG2/CD94 receptors to regulate natural killer (NK) cell functions – but pathogen-derived peptides can also be presented by HLA-E. Here we describe five peptides from severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) that elicited HLA-E restricted CD8+ T cell responses in COVID-19 convalescent patients. These T cell responses were present in the blood at frequencies similar to those reported for classical HLA-Ia-restricted anti-SARS-CoV-2 CD8+ T cells. HLA-E-peptide specific CD8+ T cell clones, which expressed diverse T cell receptors, suppressed SARS-CoV-2 replication in Calu-3 human lung epithelial cells. SARS-CoV-2 infection markedly downregulated classical HLA class I expression in Calu-3 cells and primary reconstituted human airway epithelia cells whereas HLA-E expression was not affected, enabling T cell recognition. Thus HLA-E restricted T cells could contribute to the control of SARS-CoV-2 infection alongside classical T cells.

METHODS
Total RNA of CD8 clones was extracted using a RNeasy Plus Mini Kit (Qiagen). TCR libraries using 100ng RNA were prepared using a SMARTer Human TCR a/b Profiling Kit (Takara Bio) according to the manufacturer instructions. Full length TCR alpha and beta chains were sequenced using a Miseq Reagent Kit v3 (600-cycle) on an Miseq sequencer (Illumina). Raw BCL files were converted to FASTQ format using bcl2fastq (v2.20.0.422). TCR sequences were reconstructed using MiXCR (v3.0.13) 57, using the mixcr analyze amplicon command, and only productive TCRs were included. MiXCR output files were parsed into R (v4.0.1) using tcR (v2.3.2). TCRs were filtered based on clone counts to retain only 1α1β or 2α1β paired TCRs for each clone. Clonality was confirmed by the uniqueness of TCR sequences, where each clone showed only one TCR β chain

NOTE:
Data files are named by Patient ID, Clone ID, and whether the data is alpha or beta chain. Fastq format, compressed by GZIP.
DOI: 10.17632/k2857c8vkp.1
title: Plane strain fracture dataset of PEI and PVDF interlayered epoxies

description: SPABOND™ 820HTA and SPABOND™ 840HTA wind turbine rotor blade adhesives are toughened with 0.5 mm thick PEI and PVDF thermoplastic interlayers and their plain strain fracture toughness is determined through single-edge-notch bending (SENB) experiments. Further, the tensile experiments of epoxies and thermoplastic are performed and the stress-strain and longitudinal strain-lateral strain data of SPABOND™ 820HTA, SPABOND™ 840HTA, Natural Kynar® PVDF and Ultem® 1000 PEI materials are provided. Also, the raw force-displacement datasets from pristine and thermoplastic interlayered SENB experiments are provided. The typical fracture behavior of interlayered specimens is recorded using a high-speed camera, and the corresponding videos are available here.
DOI: 10.17632/mj2h9yngkw.1
title: Open Source System for Monitoring Wireless Outdoor Networks in Mining

description: The S11D mining complex in Brazil, situated in Pará state, extracts 20 million tons of iron each quarter. Connecting via a standard 802.11b/g/n wireless network is crucial for mine operations across vast distances. A local team employs a network monitoring tool called Ekahau Site Survey to guarantee the proper functioning of the network. However, due to the harsh terrain and dangerous nature of S11D operations, this tool fails to gather data from all points of interest, leading to interpolated maps that may not accurately represent the network's overall quality. In this work, we propose a platform that can be attached to mobile machines during operations to automatically collect network parameters such as channelization, RSSI, latency, packet loss, and bandwidth without human intervention. Using this network data, we generate an RSSI map using Kriging, which the local team can use. Comparison tests conducted in the laboratory and the field demonstrate that the platform performs similarly to Ekahau in capturing network parameters, ensuring its use in day-to-day operations for mapping.
DOI: 10.17632/j4cfktkv33.1
title: Association between papillary thyroid cancer and primary aldosteronism in individuals with hypertension

description: Supplemental Material of the article "Association between papillary thyroid cancer and primary aldosteronism in individuals with hypertension".
DOI: 10.17632/c7n6sm95g9.1
title: Raw data for Cecilia Arriagada Dev Cell Paper 2024

description: Uncropped Western blots and Genotyping Information with Band Sizes
DOI: 10.17632/n7yp2p5nsr.1
title: How the EAT–Lancet Commission on food in the Anthropocene influenced discourse and research on food systems: Associated data from systematic review

description: This dataset provides Supplementary Data to Tulloch, Bogueva et al. (2023). How the EAT–Lancet Commission on food in the Anthropocene influenced discourse and research on food systems: a systematic review covering the first 2 years
post-publication. Lancet Global Health 11: S2214-109X(23)00212-7.
The dataset includes: (1) Metadata; (2) Extracted data for 192 articles from the systematic review of articles citing the EAT–Lancet Commission on food's publication in the Lancet (Willett W, et al. Food in the Anthropocene: the EAT–Lancet Commission on healthy diets from sustainable food systems. The Lancet 2019; 393(10170): 447-92); (3) Quality assessment of each negative critique identified in citing articles, to evaluate the level of evidence supporting each negative comment; (4) Quality assessment of each future policy and research recommendation from articles describing research agendas for food systems transformation.
DOI: 10.17632/n22f26v5h5.1
title: LINF_210021800

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/7dd8g8cmxf.1
title: LINF_210021300

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/rjbg776hcp.1
title: The Impact of Green Finance Policy on Total Factor Productivity: Based on Quasi-natural Experiment Evidence from China

description: This paper takes China's A-share listed firms from 2013 to 2021 as our research sample. The data at firm level is obtained from CSMAR database, and the data at city level is gathered from China City Statistical Yearbook. We get analysis data after cleaning the data downloaded from these databases. First, we analysis the data (data.dta) according to this paper and get the coefficient of the Policy, thus the visualized data is obtained. Then, we use these visualized data to draw the figures in the paper.
DOI: 10.17632/j9nsx69jyg.1
title: BDH Snps

description: RAW DATA ON SNPS IN DBH
DOI: 10.17632/gdrvdcmsr6.1
title: LINF_210023800

description: hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/vww89n6r5s.1
title: Vowel Acoustic Data in Junan Dialect from 115 Speakers Covering Age Range of 18-84 Years Old

description: The data is collected in Junan County, Linyi City, Shandong Province, China. All participants were L1 speakers of the Junan dialect recruited locally, and they were in good health with no prolonged history of leaving the area. A total of 115 participants (61 females and 54 males) between the ages of 18 and 84 were initially included in the data collection. The recording utilized 12 monosyllabic words with a CV structure covering all seven monophthongs in the phonemic system of the Junan dialect (i.e., /i, y, ɛ, a, ɔ, u, ə/). These words are common verbs, nouns, or surnames in the local area.

Formant data in the dataset is extracted under the following procedure: manual vowel segment labeling, LPC formant estimation, Viterbi tracking based on reference formant values, manual verification. The Python scripts used in the procedure can be found the "formant_extract" folder.

The formant, mean pitch and duration data can be found the file "Formants.csv" and the basic gender and age information of speakers can be found in the file "SpeakerInfo.csv", where sensitive private information are removed. The statistical analysis of the formant data is conducted in R. The R scripts used in the analysis can be found in the "Formants.Rmd" file.
DOI: 10.17632/xdgbmf3cfz.1
title: LINF_210024300

description: ATP-dependent RNA helicase SUB2; Leishmania infantum (strain JPCM5)
DOI: 10.17632/sd47rzc4nz.1
title: User-Centered Design of Smart Home Voice System for Chinese Older Adult

description: This data set corresponds to the paper entitled "User-Centered Design of Smart Home Voice System for Chinese Older Adult". The dataset includes the original interview data, questionnaire questions, questionnaire raw data, smart voice assistant tones, and APP source code.
DOI: 10.17632/9j22xm4mmr.1
title: LINF_210023000

description: cytochrome b5 domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/t6kp9zkmy2.1
title: LINF_210024400

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/c6fvj78xz9.1
title: Vegetable Intake Effect on Heterocyclic Amine Metabolism

description: This is a dataset of urinary metabolomics from a randomized trial with crossover design, where each participant underwent four study phases with a different test meal at the end of each phase. Every phase consisted of subjects consuming for six days their normal diet excluding cruciferous and apiaceous vegetables, alcohol, and caffeine. The participants refrained from meat products for 24 hours prior to the test meal. On day seven of each phase and after an overnight fast, subjects were randomly assigned to eat one of four meals:

grilled hamburger with no vegetables
grilled hamburger with steamed broccoli and Brussels sprouts
grilled hamburger with steamed parsnips, fresh parsley, and celery sticks
grilled hamburger with steamed broccoli, Brussels sprouts, and parsnips plus fresh parsley and celery sticks
DOI: 10.17632/pmgjswcfjh.1
title: SKIN TEMPERATURE OF WOMEN

description: Data from a prospective observational study using a quantitative approach. A total of 45 volunteers
participated and were equally allocated into three groups: Exogenous Hormone Group
(EHG), Physiological Menstrual Cycle Group (PMCG) and Menopause Group (MG).
All were submitted once a week to body composition measurements over a period of 28
days using an InBody 120 bioimpedance scale, and skin temperature using a FLIR
camera model T-360.
DOI: 10.17632/673dhg48h5.1
title: The second best choice in habitat selection of antlion larvae (Neuroptera: Myrmeleontidae)

description: We studied habitat selection by larvae of two antlion species, Euroleon nostras and Myrmeleon formicarius, concerning the size of sand grain and moisture. The choice of optimal grain size is known in both species, but it remains unknown how larvae choose when the optimal substrate is unavailable.
DOI: 10.17632/56m6bv8c7w.1
title: Dataset on Trombe Wall Application in a Factory Building

description: Data contains measurement record of an experimental Trombe Wall system on a factory building wall in Kalnciems, Latvia, including incident solar radiation, as well as temperature measurement at different spots. Continuous temperature measurements, taken at 10-minute intervals, encompassed outdoor and indoor temperatures, temperatures within the Trombe wall at 1.5 m and 5 m heights, and supply air temperature post-fan. Incident solar radiation (W/m2) onto the Trombe wall structure was also monitored. Experimental setup included detailed specifications of materials (timber framing, polycarbonate glazing, dark corrugated metal sheet backwall), sensors' positioning, and airflow control for comprehensive data collection.
DOI: 10.17632/6nmytyss4n.1
title: Sevrin_CellRep_2024

description: Original Western Blot images from all figures of Sevrin et al. 2024 Cell Report paper.
DOI: 10.17632/7j7ghr9fhf.1
title: LDHU3_02.0530

description: Voltage-dependent anion-selective channel; Leishmania donovani (HU3 strain)