cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24447629.v1
title: Additional file 2 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 2. The clinical information of TCGA-KIRC, E-MATB-1980, and ICGC datasets.
DOI: 10.6084/m9.figshare.26632450
title: Additional file 3 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 3. The list of 200 genes defining inflammatory response.
DOI: 10.6084/m9.figshare.26632450.v1
title: Additional file 3 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 3. The list of 200 genes defining inflammatory response.
DOI: 10.6084/m9.figshare.26632456
title: Additional file 4 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 4. The gene set of immunomodulators.
DOI: 10.1594/pangaea.610322
title: Underway pCO2 in the Atlantic Ocean of Atlantic Companion cruise 77CO20070319
DOI: 10.1594/pangaea.920316
title: Continuous water level observations at station BEFmate_I4low (2018-07)
DOI: 10.6084/m9.figshare.26632459
title: Additional file 5 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 5. Prognosis-related inflammatory response genes.
DOI: 10.6084/m9.figshare.26632462
title: Additional file 6 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 6. Biomarkers of three inflammatory response subtypes
DOI: 10.6084/m9.figshare.26632462.v1
title: Additional file 6 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 6. Biomarkers of three inflammatory response subtypes
DOI: 10.6084/m9.figshare.26632465.v1
title: Additional file 7 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 7. Inflammatory response-related genes.
DOI: 10.6084/m9.figshare.26632468
title: Additional file 8 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 8. Association between the IRscore and protein expression of druggable targets.
DOI: 10.6084/m9.figshare.26632471.v1
title: Additional file 9 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 9. Association between the IRscore and CERES score of druggable targets
DOI: 10.1594/pangaea.920324
title: Continuous water level observations at station BEFmate_I4pio (2017-05)
DOI: 10.6084/m9.figshare.26632468.v1
title: Additional file 8 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 8. Association between the IRscore and protein expression of druggable targets.
DOI: 10.6084/m9.figshare.26632471
title: Additional file 9 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 9. Association between the IRscore and CERES score of druggable targets
DOI: 10.6084/m9.figshare.26632474
title: Additional file 10 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 10. MiRNAs with differential expression between low and high IRscore groups.
DOI: 10.6084/m9.figshare.26632474.v1
title: Additional file 10 of Inflammatory response-based prognostication and personalized therapy decisions in clear cell renal cell cancer to aid precision oncology

description: Additional file 10. MiRNAs with differential expression between low and high IRscore groups.
DOI: 10.1594/pangaea.920285
title: Continuous water level observations at station BEFmate_I3upp (2017-05)
DOI: 10.1594/pangaea.112382
title: Medium sand fraction analysis, biogenic fraction, of sediment core M8-057-2 (Table 3b)
DOI: 10.1594/pangaea.816304
title: (Table 1) Tie points between IODP Site 306-U1314 benthic δ¹⁸O and the global benthic δ¹⁸O stack LR04

description: Stable carbon and oxygen isotopes from benthic and planktic foraminifers, planktic foraminifer assemblages and ice rafted debris from the North Atlantic Site U1314 (Integrated Ocean Drilling Program Expedition 306) were examined to investigate orbital and millennial-scale climate variability in the North Atlantic and its impact on global circulation focusing on the development of glacial periods during the mid-Pleistocene (ca 800-400 ka). Glacial initiations were characterized by a rapid cooling (6-10 °C in less than 7 kyr) in the mean annual sea surface temperature (SST), increasing benthic d18O values and high benthic d13C values. The continuous increase in benthic d18O suggests a continuous ice sheet growth whereas the positive benthic d13C values indicate that the flow of the Iceland Scotland Overflow water (ISOW) was vigorous. Strong deep water formation in the Norwegian Greenland Sea promoted a high transfer of freshwater from the ocean to the continents. However, low SSTs at Site U1314 suggest a subpolar gyre cooling and freshening that may have reduced deep water formation in the Labrador Sea during glacial initiations.Once the 3.5 per mil threshold in the benthic d18O record was exceeded, ice rafting started and ice sheet growth was punctuated by millennial-scale waning events which returned to the ocean part of the freshwater accumulated on the continents. Ice-rafting events were associated with a rapid reduction in the ISOW (benthic d13C values dropped 0.5-1 per mil ) and followed by millennial-scale warmings. The first two millennial-scale warm intervals of each glacial period reached interglacial temperatures and were particularly abrupt (6-10 °C in ~3 kyr). Subsequent millennial-scale warm events were cooler probably because the AMOC was rather reduced as suggested by the low benthic d13C values. These two abrupt warming events that occurred at early glacial periods were also observed in the Antarctic temperature and CO2 records, suggesting a close correlation between both Hemispheres. The comparison of the sea surface proxies with the benthic d18O record (as the Southern sign) indicates the presence of a millennial-scale seesaw pattern similar to that seen during the Last Glacial period.
description: Between tie points ages were calculated by linear interpolation.
DOI: 10.1594/pangaea.920293
title: Continuous water level observations at station BEFmate_I3upp (2018-01)
DOI: 10.1594/pangaea.134148
title: Planktic foraminifera assemblage in sediment core SU90-I02
DOI: 10.1594/pangaea.920331
title: Continuous water level observations at station BEFmate_I4pio (2017-12)
DOI: 10.1594/pangaea.920341
title: Continuous water level observations at station BEFmate_I4pio (2018-10)
DOI: 10.1594/pangaea.920343
title: Continuous water level observations at station BEFmate_I4pio (2018-12)
DOI: 10.1594/pangaea.920345
title: Continuous water level observations at station BEFmate_I4upp (2017-04)
DOI: 10.1594/pangaea.920365
title: Continuous water level observations at station BEFmate_I4upp (2018-12)
DOI: 10.6084/m9.figshare.24447536
title: Additional file 1 of ACSL4 inhibition prevents macrophage ferroptosis and alleviates fibrosis in bleomycin-induced systemic sclerosis model

description: Additional file 1: Supplementary Table 1. Sequences for lentivirus construction. Supplementary Table 2. Primer sequences for qPCR.
DOI: 10.1594/pangaea.920374
title: Continuous water level observations at station BEFmate_S3low (2017-11)
DOI: 10.6084/m9.figshare.24447536.v1
title: Additional file 1 of ACSL4 inhibition prevents macrophage ferroptosis and alleviates fibrosis in bleomycin-induced systemic sclerosis model

description: Additional file 1: Supplementary Table 1. Sequences for lentivirus construction. Supplementary Table 2. Primer sequences for qPCR.
DOI: 10.6084/m9.figshare.28398944.v1
title: Data on Figs 5, 6 and S2 Table

description: THP-1 cell viability (%) under different conditions and time points, measured in triplicate. Data used for the construction of Figures 5, 6, and Table S2.
DOI: 10.6084/m9.figshare.28398944
title: Data on Figs 5, 6 and S2 Table

description: THP-1 cell viability (%) under different conditions and time points, measured in triplicate. Data used for the construction of Figures 5, 6, and Table S2.
DOI: 10.48420/28282901
title: Trainee Perceptions of Generative AI

description: Some pre research findings were presented to the research team by David James to share perceptions from a small group of Primary PGCE trainees around the use of Generative AI within their first main block of school experience. David shared some pre research data around the trainees' use of Artificial Intelligence (AI).
DOI: 10.15468/dl.esxanf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phocoena dalli (True, 1885)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025101-250127130748423/datasets/export for details.
DOI: 10.48597/ggnq-eujt
title: Measurement of OC/EC at Ispra

description: Measurement of OC/EC at Ispra
DOI: 10.48597/2xst-5vt7
title: Measurement of OC/EC at Ispra

description: Measurement of OC/EC at Ispra
DOI: 10.48597/cn9n-8vhf
title: Measurement of OC/EC at Ispra

description: Measurement of OC/EC at Ispra
DOI: 10.48597/gy7y-6tpc
title: Measurement of OC/EC at Ispra

description: Measurement of OC/EC at Ispra
DOI: 10.48597/uppw-cprz
title: Measurement of OC/EC at Ispra

description: Measurement of OC/EC at Ispra
DOI: 10.15468/dl.yg9yfz
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oplegnathus punctatus (Temminck & Schlegel, 1844)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 217 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025103-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/c93k-9z15
title: EMF projects

description: # ! Disclaimer!-  Add jar dependencies to build path : ( ~/OCLDependencies.zip, ~/ModiscoDependencies.zip, ~/PapyrusDependencies.zip).-  For evosuite : add dependencies to the pom file :https://www.evosuite.org/documentation/maven-plugin/# Content: 1. TSE co-evolution zip file :    * (data v1) folder : includes 10  projects that was used for the evaluation process, before the metamodel evolution, containing the generated tests.        * OCL project that contains V1 of the evolving metamodel is "org.eclipse.ocl.examples.pivot".Its path is "TSE co-evolution/data v1/org.eclipse.ocl.examples.pivot/model/Pivot.ecore"Its dependent projects are:            1. "org.eclipse.ocl.examples.pivot"             2. "org.eclipse.ocl.examples.xtext.base".        * Modisco project that contains V1 of the evolving metamodel is "org.eclipse.modisco.infra.discovery.benchmark", its path is :"~/TSE co-evolution/data v1/org.eclipse.modisco.infra.discovery.benchmark/model/benchmark.ecore"Its dependent projects are :            1. "org.eclipse.modisco.infra.discovery.benchmark"            2. "org.eclipse.gmt.modisco.java.discoverer.benchmark"            3. "org.eclipse.modisco.java.discoverer.benchmark"            4. "org.eclipse.modisco.java.discoverer.benchmark.javaBenchmark"        * Papyrus project that contains V1 of the evolving metamodel is "org.eclipse.papyrus.infra.extendedtypes", its path is :"~/TSE co-evolution/data v1/org.eclipse.papyrus.infra.extendedtypes/model/ExtendedTypes.ecore"Irs depend projects are :            1. "org.eclipse.papyrus.infra.extendedtypes"            2. "org.eclipse.papyrus.infra.extendedtypes.emf"            3. "org.eclipse.papyrus.infra.queries.core.configuration"            4. "org.eclipse.papyrus.uml.tools.extendedtypes"    * (data v2) folder : includes the evolved code of the 10 projects with V2 of the metamodels mentioned above, which the code was updated by developpers, containing the generated tests.2. without test zip file :    * Contains the 10 projects without generated test divided in 3 zip files, before the coevolution process.    3. CodeCoevolutionSourceCode zip file :    * Contains the source code of the plugin's prototype impelemented  and used in the evaluation.
DOI: 10.15468/dl.qp7abf
title: Occurrence Download

description: A dataset listing the 93 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Trichosanthes L."
 ]
}

 The dataset's 93 records were derived from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025089-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/4468
title: face-ds
DOI: 10.15468/dl.3nu52k
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scaradon punctatus Temminck & Schlegel, 1844",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025104-250127130748423/datasets/export for details.
DOI: 10.15468/dl.7bcg46
title: Occurrence Download

description: A dataset containing 210 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kareius bicoloratus (Basilewsky, 1855)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 210 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025105-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7ffmk
title: Occurrence Download

description: A dataset containing 32421 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Spain",
 "GbifRegion is Europe and Central Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (November, December)",
 "StateProvince is Albacete",
 "TaxonKey is Aves",
 "Year 1970-2025"
 ]
}

 The dataset includes 32421 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025106-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.peray4
title: Occurrence Download

description: A dataset containing 966 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dysphania atriplicifolia (Spreng.) G.Kadereit, Sukhor. & Uotila, Salsola latifolia Poir., Salsola atriplicifolia Spreng., Salsola platyphylla Michx., Salsola radiata Desf., Salsola stellata Moq., Salsola corymbosa Moq., Salsola chenopodioides Dum.Cours., Salsola atriplicis Schult., Chenopodium atriplicifolium (Spreng.) A.Ludw., Kochia dentata Willd., Salsola paniculata Moq., Cycloloma atriplicifolium (Spreng.) J.M.Coult., Chenopodium atriplicifolium (Spreng.) A.Ludw. ex Graebn., Kochia atriplicifolia (Spreng.) Roth, Amorea platyphylla (Michx.) Delile, Cyclolepis platyphylla (Michx.) Moq., Cycloloma platyphyllum (Michx.) Moq., Amoreuxia platyphylla (Michx.) Moq., Kochia platyphylla (Michx.) Schult., Chenopodium radiatum (Desf.) Schrad., Salsola dentata (Willd.) Germann)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 966 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025107-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48597/eqqj-hnfe
title: Measurement of Aerosol_absorption_coefficient at Lulin

description: Measurement of Aerosol_absorption_coefficient at Lulin
DOI: 10.15468/dl.8pwmcq
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Platichthys bicoloratus (Basilewsky, 1855)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 82 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025108-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14360531
title: Prospective and retrospective representations of saccadic movements in primate prefrontal cortex

description: This dataset includes electrophysiological neural data and eye-movement measurements across three different behavioral tasks and three rhesus macaques. Electrophysiological data is recorded with Utah arrays in the dorso-lateral prefrontal cortex from awake behaving monkeys. It is a unique dataset that allows the description of a new signal in the prefrontal cortex and the comparison of prefrontal signals across different behavioral settings: reward decision, perceptual decision and instructed actions.

 

We publish here binned data at 10ms resolution aligned to different task events (see paper and further info here). Data in its original form, together with scripts to extract the data at a finer resolutions are available at: 

https://www.research-collection.ethz.ch/handle/20.500.11850/721620

If using this dataset, please cite:

Calangiu et al, Prospective and retrospective representations of saccadic movements in primate prefrontal cortex, Cell Reports 2025
DOI: 10.5281/zenodo.14360532
title: Prospective and retrospective representations of saccadic movements in primate prefrontal cortex

description: This dataset includes electrophysiological neural data and eye-movement measurements across three different behavioral tasks and three rhesus macaques. Electrophysiological data is recorded with Utah arrays in the dorso-lateral prefrontal cortex from awake behaving monkeys. It is a unique dataset that allows the description of a new signal in the prefrontal cortex and the comparison of prefrontal signals across different behavioral settings: reward decision, perceptual decision and instructed actions.

 

We publish here binned data at 10ms resolution aligned to different task events (see paper and further info here). Data in its original form, together with scripts to extract the data at a finer resolutions are available at: 

https://www.research-collection.ethz.ch/handle/20.500.11850/721620

If using this dataset, please cite:

Calangiu et al, Prospective and retrospective representations of saccadic movements in primate prefrontal cortex, Cell Reports 2025
DOI: 10.5281/zenodo.13354114
title: Data of "Fully automated pipeline for the fiber tractography of the anterior optic pathway in patients with sellar and parasellar tumors and analysis of the microstructural alterations"

description: This dataset contains the numerical data used for the analysis described in the paper "Fully automated pipeline for the fiber tractography of the anterior optic pathway in patients with sellar and parasellar tumors and analysis of the microstructural alterations", Gramegna LL et al.

chiasma_displacement.xlsx contains the value in mm of the vertical displacement of the chiasm for each subject (see the paper for the methodological procedure of the evaluation).

parameters_along_tract.xlsx contains for each subject (Exam): the condition (Cond, 0=healthy control, 1=patient), whether they experienced complete or partial resolution of symptoms after surgical treatment (Responder), the corresponding area along the anterior optic pathway (Zone), the sampling point among the 45 that the anterior optic pathway was divided into (Bin), the microstructural parameter considered (Measure) and its corresponding value (Value).
DOI: 10.5281/zenodo.13354115
title: Data of "Automated Multishell Diffusion Tensor Tractography Reconstruction of the Anterior Optic Pathway: Development in Normal Controls and Validation of Reliability During Endoscopic Trans-sphenoidal Surgery in Patients with Sellar and Parasellar Tumors"

description: This dataset contains the numerical data used for the analysis described in the paper "Automated Multishell Diffusion Tensor Tractography Reconstruction of the Anterior Optic Pathway: Development in Normal Controls and Validation of Reliability During Endoscopic Trans-sphenoidal Surgery in Patients with Sellar and Parasellar Tumors", Gramegna LL et al.

chiasma_displacement.xlsx contains the value in mm of the vertical displacement of the chiasm for each subject (see the paper for the methodological procedure of the evaluation).

parameters_along_tract.xlsx contains for each subject (Exam): the condition (Cond, 0=healthy control, 1=patient), whether they experienced complete or partial resolution of symptoms after surgical treatment (Responder), the corresponding area along the anterior optic pathway (Zone), the sampling point among the 45 that the anterior optic pathway was divided into (Bin), the microstructural parameter considered (Measure) and its corresponding value (Value).
DOI: 10.5281/zenodo.14857483
title: Data of "Fully automated pipeline for the fiber tractography of the anterior optic pathway in patients with sellar and parasellar tumors and analysis of the microstructural alterations"

description: This dataset contains the numerical data used for the analysis described in the paper "Fully automated pipeline for the fiber tractography of the anterior optic pathway in patients with sellar and parasellar tumors and analysis of the microstructural alterations", Gramegna LL et al.

chiasma_displacement.xlsx contains the value in mm of the vertical displacement of the chiasm for each subject (see the paper for the methodological procedure of the evaluation).

parameters_along_tract.xlsx contains for each subject (Exam): the condition (Cond, 0=healthy control, 1=patient), whether they experienced complete or partial resolution of symptoms after surgical treatment (Responder), the corresponding area along the anterior optic pathway (Zone), the sampling point among the 45 that the anterior optic pathway was divided into (Bin), the microstructural parameter considered (Measure) and its corresponding value (Value).
DOI: 10.15468/dl.wzpmqy
title: Occurrence Download

description: A dataset containing 76590105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 76590105 records from 5802 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025098-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.