cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13522103
title: Supplementary Material for: Study on the Dynamic Proliferation of JEV in BHK-21 Cells

description: <b><i>Introduction:</i></b> Epidemic Japanese encephalitis is one of the most important zoonotic diseases that cause central nervous system damage. The vaccination has become the most effective and economical measure for its control. Hence, real-time monitoring of Japanese encephalitis virus (JEV) proliferation is crucial to optimize virus inoculation, culturing conditions, and virus harvest time. <b><i>Methods:</i></b> The proliferation dynamics of JEV in BHK-21 cells was studied by combining the established quantitative PCR method with the conventional TCID<sub>50</sub> assay in this study. <b><i>Results:</i></b> The proliferation curve determined by the 2 methods has a definite parallel relationship, but the quantitative real-time PCR method (4 h) is faster and more sensitive than the TCID<sub>50</sub> method (3–4 days). The determination results of TCID<sub>50</sub> showed that the highest viral titer was 10<sup>5.44</sup> TCID<sub>50</sub>/0.1 mL and 10<sup>4.86</sup> TCID<sub>50</sub>/0.1 mL in cell suspension and culture supernate, respectively, while the virus RNA copies reached the peak at 1.0 × 10<sup>7.5</sup> copies/µL and 1.0 × 10<sup>5.6</sup> copies/µL in cell suspension and culture supernate, respectively. <b><i>Conclusion:</i></b> The comprehensive analysis showed that the best time for JEV proliferation in BHK-21 cell was 60 h post infection.
DOI: 10.6084/m9.figshare.13522103.v1
title: Supplementary Material for: Study on the Dynamic Proliferation of JEV in BHK-21 Cells

description: <b><i>Introduction:</i></b> Epidemic Japanese encephalitis is one of the most important zoonotic diseases that cause central nervous system damage. The vaccination has become the most effective and economical measure for its control. Hence, real-time monitoring of Japanese encephalitis virus (JEV) proliferation is crucial to optimize virus inoculation, culturing conditions, and virus harvest time. <b><i>Methods:</i></b> The proliferation dynamics of JEV in BHK-21 cells was studied by combining the established quantitative PCR method with the conventional TCID<sub>50</sub> assay in this study. <b><i>Results:</i></b> The proliferation curve determined by the 2 methods has a definite parallel relationship, but the quantitative real-time PCR method (4 h) is faster and more sensitive than the TCID<sub>50</sub> method (3–4 days). The determination results of TCID<sub>50</sub> showed that the highest viral titer was 10<sup>5.44</sup> TCID<sub>50</sub>/0.1 mL and 10<sup>4.86</sup> TCID<sub>50</sub>/0.1 mL in cell suspension and culture supernate, respectively, while the virus RNA copies reached the peak at 1.0 × 10<sup>7.5</sup> copies/µL and 1.0 × 10<sup>5.6</sup> copies/µL in cell suspension and culture supernate, respectively. <b><i>Conclusion:</i></b> The comprehensive analysis showed that the best time for JEV proliferation in BHK-21 cell was 60 h post infection.
DOI: 10.18112/openneuro.ds000231.v1.0.0
title: Integration of sweet taste and metabolism determines carbohydrate reward-study 3
DOI: 10.5281/zenodo.4196267
title: Galaxy Zoo DECaLS: Detailed Visual Morphology Measurements from Volunteers and Deep Learning for 314,000 Galaxies

description: This repository contains the data released in the paper "Galaxy Zoo DECaLS: Detailed Visual Morphology Measurements from Volunteers and Deep Learning for 314,000 Galaxies" <em>(DOI to follow on publication).</em> We release detailed morphology catalogues, both volunteer and automated, for Galaxy Zoo DECaLS. - gz_decals_volunteers_ab contains volunteer classifications for galaxies classified during the GZD-A and GZD-B campaigns. - gz_decals_volunteers_c similarly contains classifications from the GZD-C campaign. Note that GZD-C used a modified schema designed to better detect mergers and weak bars, and includes many galaxies with only approx. five volunteer responses. - gz_decals_auto_posteriors contains the predicted posteriors for volunteer responses to all galaxies used in any campaign, recorded as Dirichlet distribution concentrations. - gz_decals_auto_fractions reduces those posteriors to the automated equivalent of previous Galaxy Zoo data releases; the expected vote fractions (mean posteriors). Note that not all vote fractions are relevant for every galaxy; we suggest assessing relevance using the estimated fraction of volunteers that would have been asked each question. <em>In the v0.0.1 release, these are included within the gz_decals_auto_posteriors files.</em> Each catalogue has a schema of the same name. <em>These are not yet included in the v0.0.1 release.</em> We also release the galaxy images shown to volunteers on www.galaxyzoo.org. The images on which the automated classifier was trained may be derived from these volunteer-facing images. These are not yet included in the v0.0.1 release. We will release updates if needed via Zenodo versioning. We recommend using the latest version of this repository. You can check the version you are currently viewing on the right-hand sidebar. Please cite the paper (DOI to follow on publication) when using the data in this repository.
DOI: 10.5281/zenodo.4419795
title: New data for the manuscript "Deglacial ventilation changes in the deep Southwest Pacific" submitted to Paleoceanography and Paleoclimatology

description: This repository contains new data reported in the "Deglacial ventilation changes in the deep Southwest Pacific" submitted to Paleoceanography and Paleoclimatology by Dai et al. File MD97-2106 benthic radiocarbon.txt contains all benthic radiocarbon data in this manuscript. File MD97-2106 G bulloides trace elements.txt contains trace-element-to-calcium ratios (Mg/Ca, Al/Ca, Mn/Ca) in this manuscript.
DOI: 10.5281/zenodo.4419794
title: New data for the manuscript "Deglacial ventilation changes in the deep Southwest Pacific" submitted to Paleoceanography and Paleoclimatology

description: This repository contains new data reported in the "Deglacial ventilation changes in the deep Southwest Pacific" submitted to Paleoceanography and Paleoclimatology by Dai et al. File MD97-2106 benthic radiocarbon.txt contains all benthic radiocarbon data in this manuscript. File MD97-2106 G bulloides trace elements.txt contains trace-element-to-calcium ratios (Mg/Ca, Al/Ca, Mn/Ca) in this manuscript.
DOI: 10.26302/sshade/experiment_sb_20200814_001
title: Optical constants in the MIR and FIR for a natural perovskite crystal
DOI: 10.6084/m9.figshare.12935270.v2
title: The topographic data of deformed river terraces in the northern Tian Shan foreland

description: The data uploaded here are used to generate the topographic profiles across the fault scarps at the Jingou and Sangequan Rivers, as well as the profiles across the Huoerguos anticline, in the northern Chinese Tian Shan foreland. These topographic profiles are shown in Figures 5, 6, 8b and 12 of the article "Late Pleistocene uniform rate of thrusting along the fault's strike: A case study from the northern Tian Shan foreland" authorized by Pang L.C. and the coauthors.<br>
DOI: 10.6084/m9.figshare.12935270
title: The topographic data of deformed river terraces in the northern Tian Shan foreland

description: The data uploaded here are used to generate the topographic profiles across the fault scarps at the Jingou and Sangequan Rivers, as well as the profiles across the Huoerguos anticline, in the northern Chinese Tian Shan foreland. These topographic profiles are shown in Figures 5, 6, 8b and 12 of the article "Late Pleistocene uniform rate of thrusting along the fault's strike: A case study from the northern Tian Shan foreland" authorized by Pang L.C. and the coauthors.<br>
DOI: 10.6084/m9.figshare.12935270.v1
title: The data of deformed river terraces in the northern Tian Shan foreland

description: The data uploaded here are used to generate the topographic profiles across the fault scarps at the Jingou and Sangequan Rivers in the northern Tian Shan foreland. These topographic profiles are shown in Figures 10 and 11 of the article "Late Pleistocene uniform rate of thrusting along the fault strike: A case study from the northern Tian Shan foreland" authorized by Pang L.C. et al. and submitted to Journal of Geophysical Research: Solid Earth.<br>
DOI: 10.15129/c5a45a9b-cfd9-45b2-bf94-96145cc7cef4
title: Data for: "InGaN-diode-pumped AlGaInP VECSEL with sub-kHz linewidth at 689 nm"

description: The dataset presented here corresponds to the experimental data reported in the manuscript "InGaN-diode-pumped AlGaInP VECSEL with sub-kHz linewidth at 689 nm" published in Optics Express (https://doi.org/10.1364/OE.416210). This paper describes the design and operation of an InGaN diode-pumped, ultra-narrow linewidth and low noise of a novel AlGaInP-based vertical-external-cavity surface-emitting-lasers (VECSEL) with emission at 689 nm. It includes the data for: &gt; Fig. 2a: InGaN diode pump system power transfer; &gt; Fig. 2a(inset): direct InGaN diode pump beam profile; &gt; Fig. 2b: InGaN diode pump temperature dependent emission wavelength &gt; Fig. 4a: AlGaInP-based VECSEL power transfer with and without an intracavity birefringent filter; &gt; Fig. 4a(inset): InGaN diode pump beam profile measured after fibre; &gt; Fig. 4b: free-running AlGaInP-based VECSEL emission spectra; &gt; Fig. 4c: single frequency AlGaInP-based VECSEL beam quality measurement; &gt; Fig. 4c(inset): AlGaInP-based VECSEL beam profile; &gt; Fig. 5: relative intensity noise (RIN) for the pump laser; &gt; Fig. 6: relative intensity noise (RIN) VECSEL system; &gt; Fig. 7a: frequency noise power spectral density (PSD) for the VECSEL system; and &gt; Fig. 7b: estimative of the linewidth of VECSEL system calculated via auto-correlation and the Wiener-Khintchine theorem.
DOI: 10.15468/wm2h6e
title: Discometra luberonensis sp. nov. (Crinoidea, Himerometridae), a new feather star from the Late Burdigalian

description: This dataset contains the digitized treatments in Plazi based on the original journal article El?aume, Marc, Roux, Michel, Philippe, Michel (2020): Discometra luberonensis sp. nov. (Crinoidea, Himerometridae), a new feather star from the Late Burdigalian. European Journal of Taxonomy 729: 121-137, DOI: https://doi.org/10.5852/ejt.2020.729.1193
DOI: 10.5281/zenodo.4419778
title: metabaRfactory/metabaR_external_data: metabaR_external_data first release

description: This is the first release
DOI: 10.5281/zenodo.4419777
title: metabaRfactory/metabaR_external_data: metabaR_external_data first release

description: This is the first release
DOI: 10.5517/ccdc.csd.cc26vzfh
title: CCDC 2051717: Experimental Crystal Structure Determination

description: Related Article: W. Clegg, R.W. Harrington|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w1qw
title: CCDC 2051788: Experimental Crystal Structure Determination

description: Related Article: W. Clegg, R.W. Harrington|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w1rx
title: CCDC 2051789: Experimental Crystal Structure Determination

description: Related Article: W. Clegg, R.W. Harrington|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w217
title: CCDC 2051798: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w228
title: CCDC 2051799: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w239
title: CCDC 2051800: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w24b
title: CCDC 2051801: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w25c
title: CCDC 2051802: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w4js
title: CCDC 2051875: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Constantin-Gabriel Daniliuc, Sabrina Kronig, Matthias Tamm|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w4kt
title: CCDC 2051876: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Constantin-Gabriel Daniliuc, Sabrina Kronig, Matthias Tamm|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26w4lv
title: CCDC 2051877: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Constantin-Gabriel Daniliuc, Sabrina Kronig, Matthias Tamm|2020|CSD Communication|||
DOI: 10.21227/agsj-c547
title: Coronavirus (COVID-19) Geo-tagged Tweets Dataset

description: This dataset contains IDs and sentiment scores of the geo-tagged tweets related to the COVID-19 pandemic. The tweets are captured by an on-going project deployed at https://live.rlamsal.com.np. The model monitors the real-time Twitter feed for coronavirus-related tweets using 90+ different keywords and hashtags that are commonly used while referencing the pandemic. Complying with Twitter's content redistribution policy, only the tweet IDs are shared. You can re-construct the dataset by hydrating these IDs. The tweet IDs in this dataset belong to the tweets tweeted providing an exact location.The paper associated with this dataset is available here: Design and analysis of a large-scale COVID-19 tweets dataset-------------------------------------Related datasets: (a) Coronavirus (COVID-19) Tweets Sentiment Trend (Global)(b) Tweets Originating from India During COVID-19 Lockdowns-------------------------------------Below is the quick overview of this dataset.— Dataset name: GeoCOV19Tweets Dataset— Number of tweets : 292,570 tweets— Coverage : Global— Language : English (EN)— Dataset usage terms : By using this dataset, you agree to (i) use the content of this dataset and the data generated from the content of this dataset for non-commercial research only, (ii) remain in compliance with Twitter's Developer Policy and (iii) cite the following paper:Lamsal, R. Design and analysis of a large-scale COVID-19 tweets dataset. Applied Intelligence (2020). https://doi.org/10.1007/s10489-020-02029-z— Primary dataset : Coronavirus (COVID-19) Tweets Dataset (COV19Tweets Dataset)— Dataset updates : Everyday— Active keywords and hashtags: keywords.tsvPlease visit this page (primary dataset) for details regarding the collection date and time (and other notes) of each CSV file present in this dataset.
DOI: 10.5281/zenodo.4419854
title: Soluble Fe concentrations

description: 126 PM<sub>2.5</sub> samples were collected from June 2, 2015, to May 30, 2016 over Xi’an, China. Here are the data sets of total Fe, total soluble Fe, soluble Fe(II), soluble Fe(III), and other water-soluble ions (SO<sub>4</sub><sup>2-</sup>, NO<sub>3</sub><sup>-</sup>, K<sup>+</sup>, NH<sub>4</sub><sup>+</sup>) of these 126 samples.
DOI: 10.5287/bodleian:6qmxar7db
title: Data supporting conditional sanctioning in a legume-Rhizobium mutualism
DOI: 10.5281/zenodo.4419853
title: Soluble Fe concentrations

description: 126 PM<sub>2.5</sub> samples were collected from June 2, 2015, to May 30, 2016 over Xi’an, China. Here are the data sets of total Fe, total soluble Fe, soluble Fe(II), soluble Fe(III), and other water-soluble ions (SO<sub>4</sub><sup>2-</sup>, NO<sub>3</sub><sup>-</sup>, K<sup>+</sup>, NH<sub>4</sub><sup>+</sup>) of these 126 samples.
DOI: 10.25625/8nbk9f/hb306g
title: Darstellung von Forschungsdaten durch individuelle Präsentationsoberflächen-1.pdf

description: :unav
DOI: 10.25625/8nbk9f/dtr0lm
title: Digital Summer School, FDM 2020-1-1.pdf

description: :unav
DOI: 10.25625/8nbk9f
title: easydb - HilData

description: easydb ist ein flexibles Web-Framework, um beliebige Objekt-, Metadaten-und Medienrepositorien aufzubauen und Forschungsdaten zu verwalten. easydb wird an vielen Universitätsbibliotheken als zentraler Dienst angeboten, so wie an der Stiftung Universität Hildesheim, um unterschiedliche Datenstrukturen in einer oder mehreren Instanzen abzubilden. Der Fokus liegt bei easydb weniger im dynamischen Publizieren, sondern vielmehr auf dem Ingest-Prozess und der nachhaltigen Verwaltung von Metadaten und verwandten Dateien.
DOI: 10.5281/zenodo.4419871
title: C:N:P in dinoflagellates

description: Data on C:N:P of lab-cultured marine dinoflagellates were identified by searching in the ISI Web of Science using keywords such as elemental composition, elemental stoichiometry, elemental ratios, C:N, C:P or C:N combined with the word dinoflagellate. These studies and suitable studies cited within these sources were evaluated for data collection. Experimental conditions were recorded along with the elemental composition data including culturing methods, the media used, culture temperature and salinity. Cell volume and growth rate data were collected when available. Species were then assigned the following traits: 1. thecate or athecate; 2. non-toxic or the potential to produce C-rich or N-rich toxins; and 3. small, medium or large cell volume.
DOI: 10.5281/zenodo.3978637
title: C:N:P in dinoflagellates

description: Data on C:N:P of lab-cultured marine dinoflagellates were identified by searching in the ISI Web of Science using keywords such as elemental composition, elemental stoichiometry, elemental ratios, C:N, C:P or C:N combined with the word dinoflagellate. These studies and suitable studies cited within these sources were evaluated for data collection. Experimental conditions were recorded along with the elemental composition data including culturing methods, the media used, culture temperature and salinity. Cell volume and growth rate data were collected when available. Species were then assigned the following traits: 1. thecate or athecate; 2. non-toxic or the potential to produce C-rich or N-rich toxins; and 3. small, medium or large cell volume.
DOI: 10.25935/k89j-xm32
title: Jupiter magnetic field polar projections database : application to Juno

description: This dataset provides public access to polar projections of the Juno spacecraft magnetic footprint during perijoves (PJ) ±5h computed with 3 different magnetic field models, from mid 2016 (PJ1) to mid 2018 (PJ14).
DOI: 10.5525/gla.researchdata.1101
title: Phylogenomic inference of species and subspecies diversity in the Palearctic salamander genus Salamandra
DOI: 10.25625/dczngw/5lcewj
title: as_Strukturieren und Ordnen im FDM, 22.10.2020 (Workshop)-1.pdf

description: :unav
DOI: 10.25625/dczngw/j50uhj
title: v.3_Publication Week-1.pdf

description: :unav
DOI: 10.25625/dczngw
title: Präsentationen zum FDM

description: Workshopmaterialien.
DOI: 10.25345/c51j4v
title: MassIVE MSV000086660 - Ribosome quality control activity potentiates vaccinia virus protein synthesis during infection
title: Ribosomes are highly abundant cellular machines that perform the essential task of translating the genetic code into proteins. Cellular translation activity is finely tuned and proteostasis insults, such as those incurred upon viral infection, activate stress signaling pathways that result in translation reprogramming. Viral infection selectively shuts down host mRNA while redistributing ribosomes for selective translation of viral mRNAs. The intricacies of this selective ribosome shuffle from host to viral mRNAs are poorly understood. Here, we uncover a role for the ribosome associated quality control (RQC) factor ZNF598, a sensor for collided ribosomes, as a critical factor for vaccinia virus mRNA translation. Collided ribosomes are sensed by ZNF598, which ubiquitylates 40S subunit proteins uS10 and eS10 and thereby initiates RQC-dependent nascent chain degradation and ribosome recycling. We show that vaccinia infection in human cells enhances uS10 ubiquitylation indicating an increased burden on RQC pathways during viral propagation. Consistent with an increased RQC demand, we demonstrate that vaccinia virus replication is impaired in cells which either lack ZNF598 or contain a ubiquitylation deficient version of uS10. Using SILAC-based proteomics and concurrent RNAseq analysis, we determine that host translation of vaccinia virus mRNAs is compromised in cells that lack RQC activity as compared to control cells whereas there was little evidence of differences in host or viral transcription. Additionally, vaccinia virus infection resulted in a loss of cellular RQC activity, suggesting that ribosomes engaged in viral protein production recruit ZNF598 away from its function in host translation. Thus, co-option of ZNF598 by vaccinia virus plays a critical role in translational reprogramming that is needed for optimal viral propagation.
DOI: 10.18112/openneuro.ds003459.v1.0.0
title: Component processes of word reading in adults and children
DOI: 10.5281/zenodo.4419874
title: Data from "The notion of calorific pressure and its possibleimplications on Body Mass Index in the canton of Geneva"

description: -------------------------------------------------<br> Science et Ingénierie de l'Environnement (SIE)<br> Bâtiment GR<br> EPFL ENAC SSIE-GE<br> CH-1015 Lausanne<br> *<br> *<br> ------------------------------------------------.<br> *<br> *<br> "Calpres_BMI_Income_Group.csv" contains the data used in the study entitled:<br> "Relations between access to sport and green spaces and Body Mass Index in the canton of Geneva", <br> (C. El Khoury,Y. Frischholz, B. Heutte, V. Remy, M. Schornoz, 2020)<br> *<br> *<br> -------------------------------------------------<br> *<br> *<br> Variables : Description [unit]<br> *<br> codbar : Participant's ID [-]<br> E_Home, N_HOME : Coordinates of participants residence (LV03) [m]<br> E_Work, N_Work : Coordinates of participants residence (LV03) [m]<br> Home_FFcount : Fast-Food count around home buffers<br> Work_FFcounts : Fast-Food count around work buggers<br> Hubs_FFcounts : Fast-Food count around hubs (closest TP stop to work)<br> cal_pres : Resulting calorific pressure<br> cat : Category participants belong to according to data set separating criteria<br> BMI_randorder : Values of BMI used in a randomized order for confidentiality reasons [kg/m2]<br> *<br> *<br> -------------------------------------------------
DOI: 10.5281/zenodo.4419873
title: Data from "The notion of calorific pressure and its possibleimplications on Body Mass Index in the canton of Geneva"

description: -------------------------------------------------<br> Science et Ingénierie de l'Environnement (SIE)<br> Bâtiment GR<br> EPFL ENAC SSIE-GE<br> CH-1015 Lausanne<br> *<br> *<br> ------------------------------------------------.<br> *<br> *<br> "Calpres_BMI_Income_Group.csv" contains the data used in the study entitled:<br> "Relations between access to sport and green spaces and Body Mass Index in the canton of Geneva", <br> (C. El Khoury,Y. Frischholz, B. Heutte, V. Remy, M. Schornoz, 2020)<br> *<br> *<br> -------------------------------------------------<br> *<br> *<br> Variables : Description [unit]<br> *<br> codbar : Participant's ID [-]<br> E_Home, N_HOME : Coordinates of participants residence (LV03) [m]<br> E_Work, N_Work : Coordinates of participants residence (LV03) [m]<br> Home_FFcount : Fast-Food count around home buffers<br> Work_FFcounts : Fast-Food count around work buggers<br> Hubs_FFcounts : Fast-Food count around hubs (closest TP stop to work)<br> cal_pres : Resulting calorific pressure<br> cat : Category participants belong to according to data set separating criteria<br> BMI_randorder : Values of BMI used in a randomized order for confidentiality reasons [kg/m2]<br> *<br> *<br> -------------------------------------------------