cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28699274.v2
title: <b>CpG Analysis of Intergenic Regions in BM48-31/BGR/2008 (Bat Coronavirus)</b>

description: This project analyzes the distribution of CpG sites in the intergenic regions of the BM48-31/BGR/2008 bat coronavirus genome. The analysis provides insights into the genomic characteristics of this virus, highlighting regions with potential functional significance.<br>Key findings include:- Significant variation in CpG counts across intergenic regions, with one region (`Intergenic_Region_1`) showing a markedly higher count (183 CpG sites).- Observed/expected (O/E) ratios reveal both enrichment and depletion patterns, reflecting evolutionary pressures such as host immune evasion and mutational biases.- Most intergenic regions exhibit low or negligible CpG content, consistent with CpG depletion commonly observed in coronaviruses.<br>The dataset includes:- A tab-delimited file (`BM48-31_cpg_analysis.txt`) containing CpG counts and O/E ratios for each intergenic region.- Visualizations: - Bar chart showing CpG counts across regions. - Line plot illustrating O/E ratios.- Python scripts used for extracting intergenic regions, calculating CpG metrics, and generating plots.<br>This work contributes to understanding the genomic architecture of BM48-31/BGR/2008 and its evolutionary strategies. The analysis was performed using Biopython, Pandas, and Matplotlib.
DOI: 10.6084/m9.figshare.23101415.v1
title: Data purification effects on mucilage physico-chemical properties

description: The study examines the role of solutes in maize and wheat root and chia and flax seed mucilage for their physical properties. Two purification methods, dialysis and ethanol precipitation were applied and purification yield, cation content, pH, electrical conductivity, surface tension, viscosity, transverse 1H relaxation time and contact angle after drying of mucilage were determined before and after purification.
DOI: 10.6084/m9.figshare.9350897.v1
title: Additional file 7 of Discovery of stroke-related blood biomarkers from gene expression network models

description: : miRNA:mRNA target predictions â a complete list of statistically significant associations between log FC in miRNAs and mRNA log FC in the 6 network-central predictor genes, including the confidence scores. (TXT 29 kb)
DOI: 10.17632/tn7d7g59v2
title: Future Orientation and Perceived Goal-Related Social Context

description: Dataset name: Future Orientation and Perceived Goal-Related Social Context
Scientific domain: Psychology
Category: Survey data
Language of the study: Latvian
Research ethics: The study protocol was reviewed and approved by the Research Ethics Committee of the Institute of Cardiology and Regenerative Medicine of the University of Latvia (No 125/2020).
Language of the description: English
File type: IBM SPSS Statistics data file (.sav)

Content:
The dataset involves a convenience sample of 415 university students aged 18 to 30. Data were collected in Latvia in 2020. The dataset consists of demographic characteristics and measures of individual future orientation (Kolesovs, 2017, 2023), including future-oriented behavior [Variable label – FO behavior] and self- [Goals Self] and other-oriented [Goals Others] goals; perceived goal-related support (Freibergs & Kolesovs, 2021), including mesosystem [Support Meso] and university [Support University] support; and sense of country (Kolesovs, 2022), including perceived influence [SOCI Influence] on the country, two components of belonging to it [ SOCI REL Belonging and SOCI SPT Commitment], and opportunities for fulfillment self- and other-oriented personal goals [SOCI Opportunities Self and SOCI Opportunities Others].

Points under investigation:
The factor structure of sense of belonging to the country.
The factor structure of individual future orientation, goal-related perceived support, and sense of country.
Links among future orientation, goal-related perceived support, and sense of country.

References
Freibergs, Z., & Kolesovs, A. (2021). University students’ growth goals, opportunities for goal fulfillment, and perceived university and mesosystem support. In: Society. Integration. Education. Proceedings of the International Scientific Conference, Vol. 7, pp. 86–94. https://doi.org/10.17770/sie2021vol7.6159.
Kolesovs, A. (2017). Individual future orientation and demographic factors predicting life satisfaction. In: Society. Integration. Education. Proceedings of the International Scientific Conference, Vol. 1, pp. 534–543. https://doi.org/10.17770/sie2017vol1.2448.
Kolesovs, A. (2022). Sense of country: General and specific factors covary with social identification and predict emigration plans. Frontiers in Psychology, 13, e992028. https://doi.org/10.3389/fpsyg.2022.992028.
Kolesovs, A. (2023). General and specific factors of future orientation link to awareness of meaning in life. In: Society. Integration. Education. Proceedings of the International Scientific Conference, Vol. 2, pp. 429–437. https://doi.org/10.17770/sie2023vol2.7104.
DOI: 10.6084/m9.figshare.25323250.v1
title: Chinese Caterpillar Fungus.docx

description: The distribution records of these species primarily come from published literature and data from the Global Biodiversity Information Facility (GBIF, https://www.gbif.org/). When precise geographic coordinates were lacking in the species distribution records, Google Maps (http://ditu.google.cn/) was used to determine longitude and latitude. Distribution points for <i>Ophiocordyceps sinensis</i>, host insects, and CCFs were obtained.
DOI: 10.6084/m9.figshare.22199458.v1
title: Metadata for all samples for this study

description: This file lists the main characteristics of all the subjects recruited for this study.
DOI: 10.17632/dmgtpm56db
title: Sagittal support rather than medial cortical support matters in geriatric intertrochanteric fracture: a finite element analysis study

description: The model data are associated with the following article (please look there for all information): Jixuan Liu, Yufeng Ge, Minghui Yang, Qing Yang, Sutuke Yibulayimu,Wei Tian, Yanzhen Liu and Yu Wang. Sagittal support rather than medial cortical support matters in geriatric intertrochanteric fracture: a finite element analysis study. Under review (1 2024).
The model disclosure file includes inp files recognizable by the finite element simulation software, providing six model files used to derive the main conclusions of the paper. These models are for medial cortical bone support, anterior cortical bone support, and neutral bone support, in both young and elderly individuals.
DOI: 10.17632/t3dc3r6gf7
title: ECG changes in pregnancy

description: A case control study to determine the effects of pregnancy on Electrocardiographic parameters
DOI: 10.6084/m9.figshare.16443759.v1
title: Uncovering drug repurposing candidates for head and neck cancers: insights from systematic pharmacogenomics data analysis

description: These json files are provided as supplementary files for the manuscript "Uncovering drug repurposing candidates for head and neck cancers: insights from systematic pharmacogenomics data analysis". <b></b><br>Interactive heatmaps generated from this manuscript can be accessed and explored by uploading these json files [Files S1 – S4], onto the online Morpheus tool (https://software.broadinstitute.org/morpheus/).<br><br><br>
DOI: 10.6084/m9.figshare.18318686.v1
title: Supplementary Material for: Transitions in Social Network Types over Time among Older Adults

description: <b><i>Objective:</i></b> Network typology studies have identified heterogeneous types of older adults’ social networks. However, little is known about stability and change in social network types over time. We investigate transitions in social network types among older adults, aged 60 years and older, and factors associated with such transitions. <b><i>Methods:</i></b> We used data on 1,305 older adults, participating in 2 waves of a national, longitudinal survey, conducted in 2016–2017 and 2019, in Singapore. Latent transition analysis identified the distinct types of social networks and their transition patterns between the waves. Multinomial logistic regression examined the association of baseline and change in physical, functional, and mental health and baseline sociodemographic characteristics with network transitions into more diverse or less diverse types. <b><i>Results:</i></b> We found 5 social network types at both waves, representing the most to the least diverse types – diverse, unmarried and diverse, extended family, immediate family, and restricted. Between waves, about 57% of respondents retained their social network type, whereas 24% transitioned into more diverse types and 19% into less diverse types. Those who were older and less educated and those with worsening functional and mental health were more likely to transition into less diverse types versus remaining in the same type. <b><i>Discussion:</i></b> The findings capture the dynamics in social network composition among older adults in the contemporary aging society. We highlight sociodemographic and health disparities contributing to later life social network diversity.
DOI: 10.6084/m9.figshare.20217278.v3
title: case report form.xlsx

description: The data includes the sample of case report in the protocol article: a randomized study of the efficacy of ibandronic acid plus eldecalcitol in patients with gastric cancer after gastrectomy: A comparative study of different routes of administration of ibandronic acid.
DOI: 10.6084/m9.figshare.25237942.v1
title: Pterocarya stenoptera<i> </i>genome assembly

description: Pterocarya stenoptera<i> </i>genome assembly file.
DOI: 10.6084/m9.figshare.5120386.v1
title: Supplementary Material for: Cognition in an Ever-Changing World: Climatic Variability Is Associated with Brain Size in Neotropical Parrots

description: Research on the conditions favoring the evolution of complex cognition and its underlying neural structures has increasingly stressed the role of environmental variability. These studies suggest that the ability to learn, behave flexibly and innovate would be favored under unpredictable variations in the availability of resources, as it would enable organisms to adjust to novel conditions. Despite the growing number of studies based on the idea that larger-brained organisms would be better prepared to cope with environmental challenges, direct testing of the association between brain size and environmental variability per se remains scant. Here we focus on Neotropical parrots as our model group and test the hypothesis that if relatively larger brains were favored in climatically variable environments, larger-brained species should currently tolerate a higher degree of environmental uncertainty. Although we show that there are also other factors underlying the dynamics of brain size variation in this group, our results support the hypothesis that proportionally larger-brained species are more tolerant to climatic variability, both on a temporal and spatial scale. Additionally, they suggest that the differences in relative brain size among Neotropical parrots represent multiple, recent events in the evolutionary history of the group, and are particularly tied to an increased dependence on more open and climatically unstable habitats. As this is the first study to present evidence of the link between brain size and climatic variability in birds, our findings provide a step towards understanding the potential benefits underlying variation in brain size and the maintenance of highly enlarged brains in this and other groups.
DOI: 10.21233/vbnc-5518
title: Beijing ostracode surface sample dataset

description: Raw data for the Beijing ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.25893337.v1
title: Base de Datos y Carpeta de Zotero

description: Excel que contiene los campos de cada artículo seleccionado, filtros de búsqueda y el análisis descriptivo, también una carpeta de Zotero que guarda los artículos utilizados y subrayados.
DOI: 10.6084/m9.figshare.28162901.v1
title: Supplementary Material for: Disseminated Marginal Zone Lymphoma in a Patient with Lyme Neuroborreliosis, a case report

description: Background: Lyme borreliosis has been associated with lymphoma, particularly cutaneous lymphomas. The literature is conflicted regarding the effect of antibiotic therapy in cutaneous marginal zone lymphomas (MZL) in individuals with Lyme borreliosis. 
We present a patient diagnosed with Lyme neuroborreliosis (LNB) and disseminated MZL. 

Case: A 67-year-old man was seen due to 6 weeks of neuropathic pain with nightly worsening, headache, and 5 kg weight loss. Two weeks prior to symptom debut he had a tick bite in the left groin, no subsequent rash. A lumbar puncture revealed mononuclear pleocytosis and elevated CSF-protein. The patient was admitted and started on ceftriaxone. The B. burgdorferi intrathecal test showed intrathecally produced Borrelia antibodies, and treatment was changed to doxycycline with a total treatment duration of 21 days. A PET/CT revealed enlarged lymph nodes with increased FDG uptake. On pathological examination, the CSF showed 62% clonal B-cells – compatible with low-grade B-cell lymphoma. Examination of bone marrow and an inguinal lymph node confirmed disseminated MZL. A control lumbar puncture eight weeks later showed declining pleocytosis and clonal B-cells. At last follow-up 20 months later, he was still asymptomatic and had not required antineoplastic treatment.

Conclusion: To our knowledge, this is the first published case of LNB with non-cutaneous B-cell lymphoma treated and remitting on antibiotics alone.
Antibiotic treatment for Borrelia-positive lymphomas has yet to be investigated with high-evidence study designs, so clinicians are encouraged to publish both positive and negative findings relevant to this. We believe this case brings new perspectives to future diagnosis and treatment of lymphomas in patients with verified Lyme borreliosis.
DOI: 10.6084/m9.figshare.21601023.v1
title: A cross-sectional study on assessment of spiritual health and its associated factors among undergraduate students in a medical college in Mangalore, Karnataka. Participant Information Sheet.docx

description: Participant Information Sheet.
DOI: 10.6084/m9.figshare.20163605.v1
title: EFA

description: This data set contains descriptive statistics, KMO and Bartlett's test, total variance explained, and communalities.
DOI: 10.6084/m9.figshare.28611971.v1
title: DATA set Effective regulation of EMI properties and shielding mechanism of electrospun CNF/Co-Ni composites via organometallic precursor concentration

description: This repository contains raw source data that has been collected and published in the form of an article: SEM and TEM images for pure CNFs and CNFs with varying amounts of CoNi nanoparticles, X-ray diffraction patterns of the CNF and CNF/CoNi nanocomposites, XAS and Raman spectra of nanocomposites. All charts included in Figures 2, 3,4, 5, 6 , 7, and Figure 8 in the Supporting Information are presented in the form of tables located in separate files.
DOI: 10.6084/m9.figshare.24328537.v1
title: Talk-based versus text-based: the effects of wiki-surveys on attitudinal change in a deliberative mini-public

description: This package presents data from a study comparing two different approaches to online deliberative mini publics - one talk-based and the other text-based. The study invited 30 representatively sampled members of the British public to deliberate on issues associated with response personalisation in artificial intelligence chatbots following completion of a learning component. Talk-based deliberators gathered for 50 minutes over video conferencing to have small-group, semi-structured discussion with human facilitation. Text-based deliberators used the site AllOurIdeas to complete a 'wikisurvey' where participants responded to an open-ended prompt by writing responses and voting on pairs of responses submitted by others. Several dimensions of deliberative engagement and participant attitudes were measured as outcome variables through pre and post-deliberation surveys. The raw data presented includes responses to all survey questions, as well as discussion transcripts and submissions produced during the text-based exercise. The accompanying draft paper provides further context.
DOI: 10.21954/ou.rd.22123292.v1
title: RAW_SmallRingTensileTest_StainlessSteel316L_ExtensionRate1_2mmMin

description: This is a part of the test dataset (Digital Image Correlation Images and CSV data) that describes the experiments done at The Open University for the Small Ring Tensile Testing of SS316L performed at various displacement rates. Unprocessed images (.NEF format) start with the prefix 'RAW' while processed images (.TIF format) start with the prefix 'CLEAN'. The following letters after that describe the test type (Small Ring Test or Uniaxial Test), followed by the material. Lastly, after the material, the crosshead extension rate is described. For instance, 'Extension Rate0_3mmMin' refers to an extension rate of 0.3 mm/min and so on. The 'RAW' folders also contain the unprocessed CSV files. The 'CLEAN' folders contain the camera information (capture interval, ISO, etc) as well as the denoised CSV experimental files. The CSV files are denoised with the help of a Butterworth filter.
DOI: 10.6084/m9.figshare.1317337.v3
title: Fire Tests on E-vehicle Battery Cells and Packs

description: <b>Objective:</b> The purpose of this study was to investigate the effects of abuse conditions, including realistic crash scenarios, on Li ion battery systems in E-vehicles in order to develop safe practices and priorities when responding to accidents involving E-vehicles.<b>Method:</b> External fire tests using a single burning item equipment were performed on commercial Li ion battery cells and battery packs for electric vehicle (E-vehicle) application. The 2 most common battery cell technologies were tested: Lithium iron phosphate (LFP) and mixed transition metal oxide (lithium nickel manganese cobalt oxide, NMC) cathodes against graphite anodes, respectively. The cell types investigated were “pouch” cells, with similar physical dimensions, but the NMC cells have double the electric capacity of the LFP cells due to the higher energy density of the NMC chemistry, 7 and 14 Ah, respectively.Heat release rate (HRR) data and concentrations of toxic gases were acquired by oxygen consumption calorimetry and Fourier transform infrared spectroscopy (FTIR), respectively.<b>Results:</b> The test results indicate that the state of charge (SOC) affects the HRR as well as the amount of toxic hydrogen fluoride (HF) gas formed during combustion. A larger number of cells increases the amount of HF formed per cell. There are significant differences in response to the fire exposure between the NMC and LFP cells in this study. The LFP cells generate a lot more HF per cell, but the overall reactivity of the NMC cells is higher. However, the total energy released by both batteries during combustion was independent of SOC, which indicates that the electric energy content of the test object contributes to the activation energy of the thermal and heat release process, whereas the chemical energy stored in the materials is the main source of thermal energy in the batteries.<b>Conclusions:</b> The results imply that it is difficult to draw conclusions about higher order system behavior with respect to HF emissions based on data from tests on single cells or small assemblies of cells. This applies to energy release rates as well. The present data show that mass and shielding effects between cells in multicell assemblies affect the propagation of a thermal event.
DOI: 10.6084/m9.figshare.19174685.v1
title: Supplementary Material for: Migration of Polyphosphate Granules in <b><i>Agrobacterium tumefaciens</i></b>

description: <i>Agrobacterium tumefaciens</i> has two polyphosphate (polyP) kinases, one of which (PPK1<sub>AT</sub>) is responsible for the formation of polyP granules, while the other (PPK2<sub>AT</sub>) is used for replenishing the NTP pools by using polyP as a phosphate donor to phosphorylate nucleoside diphosphates. Fusions of eYFP with PPK2<sub>AT</sub> or of the polyP granule-associated phosin PptA from <i>Ralstonia eutropha</i> always co-localized with polyP granules in <i>A. tumefaciens</i> and allowed the tracking of polyP granules in time-lapse microscopy experiments without the necessity to label the cells with the toxic dye DAPI. Fusions of PPK1<sub>AT</sub> with mCherry formed fluorescent signals often attached to, but not completely co-localizing with, polyP granules in wild-type cells. Time-lapse microscopy revealed that polyP granules in about one-third of a cell population migrated from the old pole to the new cell pole shortly before or during cell division. Many cells de novo formed a second (nonmigrating) polyP granule at the opposite cell pole before cell division was completed, resulting in two daughter cells each having a polyP granule at the old pole after septum formation. Migration of polyP granules was disordered in mitomycin C-treated or in PopZ-depleted cells, suggesting that polyP granules can associate with DNA or with other molecules that are segregated during the cell cycle.
DOI: 10.6084/m9.figshare.21878859.v1
title: The ABC of Pair Programming: Gender-dependent Attitude, Behavior and Code of Young Learners

description: Young learners are increasingly introduced to pro- gramming, and one of the main challenges for educators is to achieve learning success while also creating enthusiasm. As it is particularly difficult to achieve this enthusiasm in young females, prior work has identified gender-specific differences in the pro- gramming behavior of young learners. Since pair programming, which turns programming into a more sociable activity, has been proposed as an approach to support programming education, in this paper we aim to investigate whether similar gender-specific characteristics can also be observed during pair programming. Therefore, we designed a gender-neutral introductory SCRATCH programming course tailored for integrating pair programming principles, and conducted it with a total of 139 students aged between 8 and 14 years. To identify gender-dependent differences and similarities, we measure the attitude towards programming and the course setting, observe the behavior of the students while programming, and analyze the code of the programs for different gender-combinations. Overall, our study demonstrates that pair programming is well suited for young learners and results in a positive attitude. While the resulting programs are similar in quality and complexity independent of gender, differences are evident when it comes to the compliance of pair programming roles, the exploration of code, and the creative customization of programs. These findings contribute to an in-depth understand- ing of social and technical gender specifics of pair programming, and provide educators with resources for implementing gender- sensitive pair programming in the classroom.
DOI: 10.17632/6fjdddntkg
title: Data for: The propulsion mechanism and tiny particles removal investigation based on the “micro-gun” propulsion system

description: Removal of microsphere particles from the surface of the substrate by the directional shockwave induced by the laser pulse emitted from the “micro-gun” propulsion system tip
DOI: 10.6084/m9.figshare.21220691.v1
title: ProblemSolving.xlsx

description: Data of the problem-solving phase
DOI: 10.6084/m9.figshare.22151801.v2
title: SNP dataset of Verano and PRA154 RILs in common bean

description: 109040 SNPs across 107 RIL derived from Verano and PRA154 plus two parents.