cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10847719
title: Mosso et al. 24 QJRMS

description: The postprocessed data from the 5 towers used in the study of Mosso et al. 24, QJRMS, divided in stable (negative heatflux, 1 min averaging period) and unstable conditions (positive heatflux, 30min averaging period).

The metodology and quality criterias applied are explained in detail in the paper.
DOI: 10.5281/zenodo.11127338
title: Dataset for: Flux-gradient relations and their dependence on turbulence anisotropy, Mosso et al. 24 QJRMS

description: The postprocessed data from the 5 towers used in the study of Mosso et al. 24, QJRMS, divided in stable (negative heatflux, 1 min averaging period reaveraged to 10 min) and unstable conditions (positive heatflux, 30min averaging period).

The metodology and quality criterias applied are explained in detail in the paper.
DOI: 10.6084/m9.figshare.c.3775364_d4.v1
title: MOESM4 of Boosting LPMO-driven lignocellulose degradation by polyphenol oxidase-activated lignin building blocks

description: Additional file 4: Table S1. Compounds detected after incubation of 21 reducing agents without or with MtPPO7 by UHPLC/UV-MS1.
DOI: 10.15468/dl.bpcuhp
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Ambystoma mavortium diaboli Dunn, 1940)"
 ]
}

 The dataset includes 71 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039413-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3778541_d2.v1
title: Additional file 11: of PERK induces resistance to cell death elicited by endoplasmic reticulum stress and chemotherapy

description: Tumor growth in mice bearing HT29 and HT29/MDR tumors. Tumor volume (reported in mm3) of HT29 and HT29/MDR, inducibly silenced for PERK, untreated (Ctrl) or treated with oxaliplatin (oPt), as indicated in Methods and in the main FigureÂ 6, at different time points for each animal. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.c.3778559_d1.v1
title: MOESM1 of Autolysis of Pichia pastoris induced by cold

description: Additional file 1. Construction strategy of pLGC09.
DOI: 10.6084/m9.figshare.c.3778541_d2
title: Additional file 11: of PERK induces resistance to cell death elicited by endoplasmic reticulum stress and chemotherapy

description: Tumor growth in mice bearing HT29 and HT29/MDR tumors. Tumor volume (reported in mm3) of HT29 and HT29/MDR, inducibly silenced for PERK, untreated (Ctrl) or treated with oxaliplatin (oPt), as indicated in Methods and in the main FigureÂ 6, at different time points for each animal. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.c.3778559_d1
title: MOESM1 of Autolysis of Pichia pastoris induced by cold

description: Additional file 1. Construction strategy of pLGC09.
DOI: 10.6084/m9.figshare.c.3778550_d2.v1
title: Additional file 1: of Discrimination of candidate subgenome-specific loci by linkage map construction with an S1 population of octoploid strawberry (Fragariaâ  Ă â  ananassa)

description: List of the tested SSR markers. (XLSX 81 kb)
DOI: 10.6084/m9.figshare.c.3778550_d2
title: Additional file 1: of Discrimination of candidate subgenome-specific loci by linkage map construction with an S1 population of octoploid strawberry (Fragariaâ  Ă â  ananassa)

description: List of the tested SSR markers. (XLSX 81 kb)
DOI: 10.6084/m9.figshare.c.3778559_d2.v1
title: MOESM2 of Autolysis of Pichia pastoris induced by cold

description: Additional file 2. Plasmid pLGC09.
DOI: 10.6084/m9.figshare.c.3778559_d2
title: MOESM2 of Autolysis of Pichia pastoris induced by cold

description: Additional file 2. Plasmid pLGC09.
DOI: 10.6084/m9.figshare.c.3778550_d3.v1
title: Additional file 2: of Discrimination of candidate subgenome-specific loci by linkage map construction with an S1 population of octoploid strawberry (Fragariaâ  Ă â  ananassa)

description: Expected segregation patterns of polymorphic loci in the S1 and F1 mapping populations in allo-octoploid species. A and B indicate bi-alleles while O indicates a null allele on the given locus. (XLSX 38 kb)
DOI: 10.6084/m9.figshare.c.3782195_d2.v1
title: MOESM2 of The serum protein responses to treatment with Xiaoke Pill and Glibenclamide in type 2 diabetes patients

description: Additional file 2: Table S2. The list of 236 identified serum proteins in iTRAQ.
DOI: 10.6084/m9.figshare.c.3782195_d2
title: MOESM2 of The serum protein responses to treatment with Xiaoke Pill and Glibenclamide in type 2 diabetes patients

description: Additional file 2: Table S2. The list of 236 identified serum proteins in iTRAQ.
DOI: 10.6084/m9.figshare.c.3782168_d4.v1
title: MOESM4 of Histone demethylases UTX and JMJD3 are required for NKT cell development in mice

description: Additional file 4: Table S2. List of differentially expressed genes between WT and DKO P1 NK T cells.
DOI: 10.6084/m9.figshare.c.3782168_d4
title: MOESM4 of Histone demethylases UTX and JMJD3 are required for NKT cell development in mice

description: Additional file 4: Table S2. List of differentially expressed genes between WT and DKO P1 NK T cells.
DOI: 10.15468/dl.243e48
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Ambystoma mavortium diaboli Dunn, 1940)"
 ]
}

 The dataset includes 71 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039414-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3784184_d2.v1
title: MOESM2 of Multiplex, DNase-free one-step reverse transcription PCR for Plasmodium 18S rRNA and spliced gametocyte-specific mRNAs

description: Additional file 2. Candidate primer pairs evaluated by LCGreen RT-PCR. Contains forward and reverse primer sequences for candidate targets and Î CT values for stage-specificity.
DOI: 10.6084/m9.figshare.c.3784184_d2
title: MOESM2 of Multiplex, DNase-free one-step reverse transcription PCR for Plasmodium 18S rRNA and spliced gametocyte-specific mRNAs

description: Additional file 2. Candidate primer pairs evaluated by LCGreen RT-PCR. Contains forward and reverse primer sequences for candidate targets and Î CT values for stage-specificity.
DOI: 10.6084/m9.figshare.c.3784184_d3
title: MOESM3 of Multiplex, DNase-free one-step reverse transcription PCR for Plasmodium 18S rRNA and spliced gametocyte-specific mRNAs

description: Additional file 3. Data and 2X2 files for field study samples. Contains the raw data from multiplex RT-PCR assays performed on the samples from asymptomatic subjects in a field study in Uganda and 2X2 sensitivity/specificity tables.
DOI: 10.6084/m9.figshare.c.3784193_d3.v1
title: Additional file 3: of Recognition of a structural domain (RWDBD) in Gcn1 proteins that interacts with the RWD domain containing proteins

description: Description of the 52 eukaryotic Gcn1 sequences used in the study. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3785483_d1.v1
title: Additional file 1: Table S1. of Extremely low-coverage whole genome sequencing in South Asians captures population genomics information

description: Sequencing and variant calling statistics for 185 SAS-AP samples. (XLS 50Â kb)
DOI: 10.6084/m9.figshare.c.3785483_d1
title: Additional file 1: Table S1. of Extremely low-coverage whole genome sequencing in South Asians captures population genomics information

description: Sequencing and variant calling statistics for 185 SAS-AP samples. (XLS 50Â kb)
DOI: 10.6084/m9.figshare.c.3788368_d3.v1
title: Additional file 1: of Insulin-like growth factor 1 receptor affects the survival of primary prostate cancer patients depending on TMPRSS2-ERG status

description: IGFBP-3, IGF-1, IGF-1R and INSR RQ values of 270 PCa cases and different T2E-defined molecular subtypes. (XLS 79 kb)
DOI: 10.6084/m9.figshare.c.3788368_d3
title: Additional file 1: of Insulin-like growth factor 1 receptor affects the survival of primary prostate cancer patients depending on TMPRSS2-ERG status

description: IGFBP-3, IGF-1, IGF-1R and INSR RQ values of 270 PCa cases and different T2E-defined molecular subtypes. (XLS 79 kb)
DOI: 10.15468/dl.ts32dr
title: Occurrence Download

description: A dataset containing 175 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Ambystoma mavortium mavortium)"
 ]
}

 The dataset includes 175 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039415-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3788602_d5
title: Additional file 5: of Filamentous ascomycete genomes provide insights into Copia retrotransposon diversity in fungi

description: Comparison between structural features of 7 fungal and 6 metazoan GalEa retrotransposons. Features from metazoan elements were described in Terrat et al. (2008) and Piednoël et al. (2013). (XLSX 28 kb)
DOI: 10.6084/m9.figshare.c.3788611_d2
title: Additional file 2: Table S1. of Long-lasting effect of obesity on skeletal muscle transcriptome

description: The list of differentially expressed WSD/CR genes identified in the present study. Table S2. The list of differentially expressed CR/WSD genes identified in the present study. Table S3. Erythroid genes identified in the present study. Table S4. qRT-PCR primers used in the study. (XLSX 327 kb)
DOI: 10.6084/m9.figshare.c.3788626_d2.v1
title: Additional file 2: Table S2. of Genetic variation and expression levels of tight junction genes identifies association between MAGI3 and inflammatory bowel disease

description: Inflammatory bowel disease-phenotypes were investigated by performing case–control approach in genetic association studies. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.c.3788626_d1.v1
title: Additional file 1: Table S1. of Genetic variation and expression levels of tight junction genes identifies association between MAGI3 and inflammatory bowel disease

description: Single nucleotide polymorphism markers included in the study. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3788626_d1
title: Additional file 1: Table S1. of Genetic variation and expression levels of tight junction genes identifies association between MAGI3 and inflammatory bowel disease

description: Single nucleotide polymorphism markers included in the study. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3788626_d2
title: Additional file 2: Table S2. of Genetic variation and expression levels of tight junction genes identifies association between MAGI3 and inflammatory bowel disease

description: Inflammatory bowel disease-phenotypes were investigated by performing case–control approach in genetic association studies. (XLSX 24 kb)
DOI: 10.15468/dl.sbqqk2
title: Occurrence Download

description: A dataset containing 4617 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Données d'observation de la mégafaune marine issues des campagnes océanographiques en France métropolitaine"
 ]
}

 The dataset includes 4617 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039416-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3790975_d4.v1
title: Additional file 13: Table S8. of Evolutionary relationships and expression analysis of EUL domain proteins in rice (Oryza sativa)

description: Geometric and thermodynamic qualities of the beta-trefoil domains of EUL models built by homology modeling. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3790975_d4
title: Additional file 13: Table S8. of Evolutionary relationships and expression analysis of EUL domain proteins in rice (Oryza sativa)

description: Geometric and thermodynamic qualities of the beta-trefoil domains of EUL models built by homology modeling. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3790975_d5.v1
title: Additional file 1: Table S1. of Evolutionary relationships and expression analysis of EUL domain proteins in rice (Oryza sativa)

description: Sizes of intron and exon sequences for the O. sativa EUL genes. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3790975_d5
title: Additional file 1: Table S1. of Evolutionary relationships and expression analysis of EUL domain proteins in rice (Oryza sativa)

description: Sizes of intron and exon sequences for the O. sativa EUL genes. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3791131_d14
title: Additional file 7: of The common transcriptional subnetworks of the grape berry skin in the late stages of ripening

description: BinGO analysis of the top 500 DEGs with a positive difference between 26 and 20° Brix (26–20) (XLSX 73 kb).
DOI: 10.6084/m9.figshare.c.3791161_d8.v1
title: MOESM7 of De novo assembly, functional annotation, and analysis of the giant reed (Arundo donax L.) leaf transcriptome provide tools for the development of a biofuel feedstock

description: Additional file 7: Table S5. Description of the identified simple sequence repeat (SSR) types for the A. donax leaf transcriptome. Table S6. SSR repeat motifs in A. donax unitranscripts.
DOI: 10.6084/m9.figshare.c.3791161_d7.v1
title: MOESM6 of De novo assembly, functional annotation, and analysis of the giant reed (Arundo donax L.) leaf transcriptome provide tools for the development of a biofuel feedstock

description: Additional file 6: Table S3. Frequency and distribution of the identified simple sequence repeat (SSR) classes in A. donax leaf transcriptome. Table S4. Frequency of SSR classes in the A. donax leaf transcriptome.
DOI: 10.15468/dl.4dpdqv
title: Occurrence Download

description: A dataset containing 175 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Ambystoma mavortium mavortium)"
 ]
}

 The dataset includes 175 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039417-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3791131_d15.v1
title: Additional file 8: of The common transcriptional subnetworks of the grape berry skin in the late stages of ripening

description: BinGO analysis of the top 500 DEGs with a negative difference between 26 and 20° Brix (26–20) (XLSX 88 kb).
DOI: 10.6084/m9.figshare.c.3791131_d15
title: Additional file 8: of The common transcriptional subnetworks of the grape berry skin in the late stages of ripening

description: BinGO analysis of the top 500 DEGs with a negative difference between 26 and 20° Brix (26–20) (XLSX 88 kb).
DOI: 10.6084/m9.figshare.c.3791161_d8
title: MOESM7 of De novo assembly, functional annotation, and analysis of the giant reed (Arundo donax L.) leaf transcriptome provide tools for the development of a biofuel feedstock

description: Additional file 7: Table S5. Description of the identified simple sequence repeat (SSR) types for the A. donax leaf transcriptome. Table S6. SSR repeat motifs in A. donax unitranscripts.
DOI: 10.6084/m9.figshare.c.3791161_d7
title: MOESM6 of De novo assembly, functional annotation, and analysis of the giant reed (Arundo donax L.) leaf transcriptome provide tools for the development of a biofuel feedstock

description: Additional file 6: Table S3. Frequency and distribution of the identified simple sequence repeat (SSR) classes in A. donax leaf transcriptome. Table S4. Frequency of SSR classes in the A. donax leaf transcriptome.
DOI: 10.6084/m9.figshare.c.3791161_d10.v1
title: MOESM9 of De novo assembly, functional annotation, and analysis of the giant reed (Arundo donax L.) leaf transcriptome provide tools for the development of a biofuel feedstock

description: Additional file 9: Table S8. Candidate PolySSRs identified in the reference and in the ecotype-specific assemblies. Table S9. Specific primer pairs designed for the 53 PolySSRs using Primer3 in the CandiSSR pipeline. Table S10. PolySSR motifs in the reference and ecotype-specific transcriptomes.
DOI: 10.6084/m9.figshare.c.3791161_d9.v1
title: MOESM8 of De novo assembly, functional annotation, and analysis of the giant reed (Arundo donax L.) leaf transcriptome provide tools for the development of a biofuel feedstock

description: Additional file 8: Table S7. Summary statistics of each ecotype-specific assemblies.
DOI: 10.6084/m9.figshare.c.3791161_d9
title: MOESM8 of De novo assembly, functional annotation, and analysis of the giant reed (Arundo donax L.) leaf transcriptome provide tools for the development of a biofuel feedstock

description: Additional file 8: Table S7. Summary statistics of each ecotype-specific assemblies.
DOI: 10.6084/m9.figshare.c.3791161_d10
title: MOESM9 of De novo assembly, functional annotation, and analysis of the giant reed (Arundo donax L.) leaf transcriptome provide tools for the development of a biofuel feedstock

description: Additional file 9: Table S8. Candidate PolySSRs identified in the reference and in the ecotype-specific assemblies. Table S9. Specific primer pairs designed for the 53 PolySSRs using Primer3 in the CandiSSR pipeline. Table S10. PolySSR motifs in the reference and ecotype-specific transcriptomes.
DOI: 10.6084/m9.figshare.c.3794530_d2
title: Additional file 2: Table S2. of Contrasting impacts of ocean acidification and warming on the molecular responses of CO2-resilient oysters

description: List of proteins identified by mass spectrometry that were differentially regulated by CO2 and/or thermal stress. Fold changes (FC) were calculated from the mean normalised intensities of protein spots relative to the control, ambient condition (aCO2 + aT). FC values &gt;1 reflect up-regulation in the elevated treatment relative to ambient controls. FC values &lt;1 reflect down-regulation in the elevated treatment. The table also shows arbitrarily assigned protein spot numbers, putative identifications (description) and their respective accession numbers based on homology to a Mollusca nr database, spectral counts, log(e) values, isoelectric points (pI) and molecular weights (MW). aCO2 + eT: ambient CO2 and elevated temperature; eCO2 + aT: elevated CO2 and ambient temperature; and eCO2 + eT: elevated CO2 and elevated temperature. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.c.3794539_d2.v1
title: Additional file 2: Table S1. of Large-scale mitochondrial DNA analysis of native honey bee Apis mellifera populations reveals a new African subgroup private to the South West Indian Ocean islands

description: Sampling details including location, geo-coordinates, COI-COII and ND2 sequences information for each individual (XLSX 104 kb)
DOI: 10.6084/m9.figshare.c.3794539_d2
title: Additional file 2: Table S1. of Large-scale mitochondrial DNA analysis of native honey bee Apis mellifera populations reveals a new African subgroup private to the South West Indian Ocean islands

description: Sampling details including location, geo-coordinates, COI-COII and ND2 sequences information for each individual (XLSX 104 kb)
DOI: 10.6084/m9.figshare.c.3794521_d2.v1
title: Additional file 2: of The refractive state of the eye in Icelandic horses with the Silver mutation

description: Tabular data generated during this study can be found in Additional file 2. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3794557_d1.v1
title: Additional file 1: of Identification of the sequence determinants of protein N-terminal acetylation through a decision tree approach

description: The dataset used in this study. (XLS 101 kb)
DOI: 10.6084/m9.figshare.c.3794521_d2
title: Additional file 2: of The refractive state of the eye in Icelandic horses with the Silver mutation

description: Tabular data generated during this study can be found in Additional file 2. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3795958_d1.v1
title: Additional file 1: of Protective effects of synbiotic diets of Bacillus coagulans, Lactobacillus plantarum and inulin against acute cadmium toxicity in rats

description: Raw data. (XLS 452 KB)
DOI: 10.15468/dl.fb85ge
title: Occurrence Download

description: A dataset containing 271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Ambystoma mavortium melanostictum (Baird, 1860))"
 ]
}

 The dataset includes 271 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039418-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3797008_d6
title: Additional file 1: of Transcriptome profiling of Staphylococci-infected cow mammary gland parenchyma

description: Genes with up-regulated expression found in samples derived from cow mammary gland parenchyma infected with coagulase-positive Staphylococci in 1stor 2nd lactations (CoPS-1/2) vs. healthy cows (H). (XLS 86Â kb)
DOI: 10.6084/m9.figshare.c.3797008_d6.v1
title: Additional file 1: of Transcriptome profiling of Staphylococci-infected cow mammary gland parenchyma

description: Genes with up-regulated expression found in samples derived from cow mammary gland parenchyma infected with coagulase-positive Staphylococci in 1stor 2nd lactations (CoPS-1/2) vs. healthy cows (H). (XLS 86Â kb)
DOI: 10.6084/m9.figshare.c.3799324_d1.v1
title: Additional file 1: Table S1. of The pepper virome: natural co-infection of diverse viruses and their quasispecies

description: Summary of de novo-assembled transcriptomes for two libraries using Trinity program. Table S2. Summary of MEGABLAST results to identify virus-associated contigs from PJ transcriptome. Table S3. Summary of MEGABLAST results to identify virus-associated contigs from TW transcriptome. Table S4. Summary of identified viruses in PJ and TW transcriptomes with numbers of associated viral contigs. Table S5. Single nucleotide variations of BPEV in the PJ transcriptome. Table S6. Single nucleotide variations of BPEV in the TW transcriptome. Table S7. Single nucleotide variations of PepVA in the PJ transcriptome. Table S8. Single nucleotide variations of PepVA in the TW transcriptome. Table S9. Single nucleotide variations of ChiLCV DNA-A in the PJ transcriptome. Table S10. Single nucleotide variations of ChiLCV DNA-A in the TW transcriptome. Table S11. Single nucleotide variations of PepLCV betasatellite in the PJ transcriptome. Table S12. Single nucleotide variations of PepLCV betasatellite in the TW transcriptome. Table S13. Single nucleotide variations of CYVMV alphasatellite in the PJ transcriptome. Table S14. Single nucleotide variations of CYVMV alphasatellite in the TW transcriptome. Table S15. Number of viral sequence reads and copy number for identified viruses. (XLSX 131 kb)
DOI: 10.6084/m9.figshare.c.3799315_d2.v1
title: Additional file 11: Table S6. of Label-free quantitative proteomics of Corynebacterium pseudotuberculosis isolates reveals differences between Biovars ovis and equi strains

description: Proteins identified in 1002_ovis by Proteogenomics. (XLSX 216Â kb)
DOI: 10.6084/m9.figshare.c.3799315_d2
title: Additional file 11: Table S6. of Label-free quantitative proteomics of Corynebacterium pseudotuberculosis isolates reveals differences between Biovars ovis and equi strains

description: Proteins identified in 1002_ovis by Proteogenomics. (XLSX 216Â kb)