cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.v8g21pt
title: Data from: Signatures of selection and environmental adaptation across the goat genome post-domestication

description: Background: Since goat was domesticated 10,000 years ago, many factors
 have contributed to the differentiation of goat breeds and these are
 classified mainly into two types: (i) adaptation to different breeding
 systems and/or purposes and (ii) adaptation to different environments. As
 a result, approximately 600 goat breeds have developed worldwide; they
 differ considerably from one another in terms of phenotypic
 characteristics and are adapted to a wide range of climatic conditions. In
 this work, we analyzed the AdaptMap goat dataset, which is composed of
 data from more than 3000 animals collected worldwide and genotyped with
 the CaprineSNP50 BeadChip. These animals were partitioned into groups
 based on geographical area, production uses, available records on solid
 coat color and environmental variables including the sampling geographical
 coordinates, to investigate the role of natural and/or artificial
 selection in shaping the genome of goat breeds. Results: Several
 signatures of selection on different chromosomal regions were detected
 across the different breeds, sub-geographical clusters, phenotypic and
 climatic groups. These regions contain genes that are involved in
 important biological processes, such as milk-, meat- or fiber-related
 production, coat color, glucose pathway, oxidative stress response, size,
 and circadian clock differences. Our results confirm previous findings in
 other species on adaptation to extreme environments and human purposes and
 provide new genes that could explain some of the differences between goat
 breeds according to their geographical distribution and adaptation to
 different environments. Conclusions: These analyses of signatures of
 selection provide a comprehensive first picture of the global
 domestication process and adaptation of goat breeds and highlight possible
 genes that may have contributed to the differentiation of this species
 worldwide.
description: ADAPTmap_genotypeTOP_20160222_fullGenotyping data in plink binary format (bed/bim/fam) for 4,653 goats and 53,347 genotypes.
DOI: 10.6092/unibo/amsacta/8749
title: INTELLIMAN. WP4. Adaptive shared autonomy. T4_4. Algorithms for autonomy arbitration. Telemanipulation. v0

description: The dataset is related to user-centered unilateral telemanipulation systems for robotic manipulators, with a specific focus on the analysis and comparison of hybrid motion mapping strategies. It includes planar end-effector trajectory data recorded during the execution of a haptic manipulation task, where users interact with a robotic system through a haptic interface operating in a hybrid control mode that seamlessly alternates between direct control (position-to-position mapping) and rate control (position-to-velocity mapping).

The dataset was acquired from experimental trials involving healthy users performing goal-oriented manipulation tasks in a simulated and real-time teleoperation environment. It is intended for the evaluation and comparison of trajectory-level performance metrics between different control strategies, enabling the assessment of stability, accuracy, and user interaction behavior during telemanipulation. Each data sample captures synchronized kinematic information from both direct and rate control modalities, along with task-related state indicators such as object attachment events.

The data were collected within the framework of a unilateral teleoperation system developed to ensure intuitive, accessible, and effective control for operators with varying levels of robotics expertise. The experimental setup integrates a haptic interface with force feedback, a graphical user–machine interface providing real-time visualization, and a simulation environment based on MuJoCo for user training and task rehearsal. The dataset supports the analysis of hybrid control effectiveness in complex industrial-like scenarios, such as remote manipulation and programming by demonstration in weakly structured environments.

The dataset is associated with the following publication:

M. Tafuri, D. Chiaravalli, M. S. Gharamaleki, C. Melchiorri, G. Palli, and R. Meattini,
“Experimental Evaluation of a User-Centered Unilateral Telemanipulation System for Training and Control in Robotic Industrial Scenarios,”
Proceedings of the 2025 55th Annual IEEE/IFIP International Conference on Dependable Systems and Networks Workshops (DSN-W), 2025. https://doi.org/10.1109/DSN-W65791.2025.00046
DOI: 10.5281/zenodo.18389984
title: TRANSVERSALIZACIÓN DEL ENFOQUE DE GÉNERO EN LA EDUCACIÓN SUPERIOR CHILENA
DOI: 10.5061/dryad.qq6mb07
title: Data from: Body condition influences ontogeny of foraging behavior in juvenile southern elephant seals

description: 1. Ontogeny of diving and foraging behaviour in marine top predators is
 poorly understood despite its importance in population recruitment. This
 lack of knowledge is partly due to the difficulties of monitoring
 juveniles in the wild, which is linked to high mortality early in life. 2.
 Pinnipeds are good models for studying the development of foraging
 behaviours because juveniles are large enough to robustly carry tracking
 devices for many months. Moreover, parental assistance is absent after a
 juvenile departs for its first foraging trip, minimising confounding
 effects of parental input on the development of foraging skills. 3. In
 this study, we tracked 20 newly-weaned juvenile southern elephant seals
 from Kerguelen Islands for up to 338 days during their first trip at sea
 following weaning. We used a new generation of satellite relay tags, which
 allow for the transmission of dive, accelerometer and location data. We
 also monitored, at the same time, nine adult females from the colony
 during their post-breeding trips, in order to compare diving and foraging
 behaviours. 4. Juveniles showed a gradual improvement through time in
 their foraging skills. Like adults females, they remarkably adjusted their
 swimming effort according to temporal changes in buoyancy (i.e. a proxy of
 their body condition). They also did not appear to exceed their aerobic
 physiological diving limits, although dives were constrained by their
 smaller size compared to adults. Changes in buoyancy appeared to also
 influence their decision to either keep foraging or return to land,
 alongside the duration of their haul outs and choice of foraging habitat
 (oceanic vs plateau). 5. Further studies are thus needed to better
 understand how patterns in juveniles survival, and therefore elephant seal
 populations, might be affected by their changes in foraging skills and
 changes in their environmental conditions.
description: juvs_ses_data_for_e&eJuveniles and Post-breeding Adults southern elephant seals diving parameters by days
DOI: 10.5281/zenodo.18389983
title: TRANSVERSALIZACIÓN DEL ENFOQUE DE GÉNERO EN LA EDUCACIÓN SUPERIOR CHILENA
DOI: 10.5061/dryad.cq4pv11
title: Data from: A practical introduction to microbial molecular ecology through the use of isolation chips

description: In the context of anti-microbial resistance as one of the most serious
 issues faced globally by health providers, we explored a practical
 introduction to molecular microbial ecology. We designed field work and
 practical experiments for third year members of a four year undergraduate
 Masters Programme in which the students employed traditional and novel
 isolation techniques to identify antimicrobial activities from soil
 dwelling microorganisms. Students gained experience in isolating DNA from
 complex microbial communities, amplifying 16S rRNA genes and applied
 richness / diversity indices as well as principal coordinates analyses to
 the interpretation of the data they obtained from high throughput
 sequencing. Our results confirmed that isolation chips (iChips) facilitate
 the growth of a greater diversity and different species subset from the
 complex soil microorganism community than traditional plate spreading
 techniques. However, rarefaction of 16S rRNA amplicon sequencing data
 showed that the majority of observed species in soil remain unculturable
 by current methods. Based on the written reports produced by the students
 carrying out the work, we concluded that the described protocols are
 robust and informative, that these activities provide a good practical
 introduction to the theories and practice of molecular ecology and can be
 easily deployed to groups of six or more students in a cost-effective
 manner.
description: Appended data for Alessi
 et alThis file contains maps
 and GPS locations for soil samples, images of iChip devices and colonies
 grown from this system, sequence statistics, costs associated with
 practical work and a list of species identified in Figure
 5.Appendix.docx
DOI: 10.5061/dryad.d9b02tp
title: Data from: Association mapping of ectomycorrhizal traits in loblolly pine (Pinus taeda L.)

description: To understand how diverse mutualisms coevolve and how species adapt to
 complex environments, a description of the underlying genetic basis of the
 traits involved must be provided. For example, in diverse coevolving
 mutualisms, such as the interaction of host plants with a suite of
 symbiotic mycorrhizal fungi, a key question is whether host plants can
 coevolve independently with multiple species of symbionts, which depends
 on whether those interactions are governed independently by separate genes
 or pleiotropically by shared genes. To provide insight into this question,
 we employed an association mapping approach in a clonally replicated field
 experiment of loblolly pine (Pinus taeda L.) to identify genetic
 components of host traits governing ectomycorrhizal (EM) symbioses
 (mycorrhizal traits). The relative abundances of different EM fungi as
 well as the total number of root tips per cm root colonized by EM fungi
 were analyzed as separate mycorrhizal traits of loblolly pine.
 Single-nucleotide polymorphisms (SNPs) within candidate genes of loblolly
 pine were associated with loblolly pine mycorrhizal traits, mapped to the
 loblolly pine genome, and their putative protein function obtained when
 available. The results support the hypothesis that ectomycorrhiza
 formation is governed by host genes of large effect that apparently have
 independent influences on host interactions with different symbiont
 species.
description: SNP genotypes and
 mycorrhizal phenotype data for loblolly pine population in Southern
 MississippiThis file contains data
 for 152 loblolly pine genotypes (column 'Tree'). The next 4512
 columns contain SNP marker data, followed by 14 columns of ectomycorrhizal
 colonization data.Piculell_etal_PinustaedaSNP.xlsx
DOI: 10.5061/dryad.dq23r52
title: Data from: Quadratic relationships between group size and foraging efficiency in a herbivorous primate

description: [No abstract entered]
description: Data ON DAILY TRAVEL,
 ACTIVITY BUDGETS AND ENERGY INTAKEDATA FOR DAILY TRAVEL
 DISTANCES, ACTIVITY BUDGET (FOR TIME SPENT FEEDING AND TRAVELING), AND
 FOOD SITES (FOR ENERGY INTAKE AND INDIVIDUAL TRAVEL).Data for
 repository.xls
DOI: 10.5061/dryad.664h2vf
title: Data from: Falsolikanella campanensis (Azéma & Jaffrezo) revisited on type material, evidence of polyphysacean nature (green algae)

description: The genus Falsolikanella Granier was introduced by Granier (1987) based on
 the basal Cretaceous species Likanella campanensis Azéma &
 Jaffrezo (1972), and assigned to the tribe Diploporeae (Pia) within the
 green alga order Dasycladales. Later, other species were assigned to
 Falsolikanella. Sections of the type-specimens of Likanella campanensis
 are reviewed. They show that in this species, the arrangement of the
 laterals is not metaspondyl, but typical of the genus Actinoporella
 (Gümbel), with coronae arising from a single primary lateral. Therefore,
 the species is assigned to the genus Actinoporella within the tribe
 Acetabularieae Decaisne, family Polyphysaceae Kützing, and the generic
 attribution of other species previously assigned to Falsolikanella is
 discussed.
description: Supplemental_Data_textText describes estimation of w from oblique sections and the “couple of pores” method.Supplemental_Data_fig_1Supplemental Data Figure 1. Relationships among sections of a typical cylindrical calcareous skeleton of Dasycladales with euspondyl, acrophorous primary laterals. (1) oblique section; a, intercept of a whorl close to the central cavity; b, general intercept of a whorl. (2) axial section showing the oblique section (dashed line) corresponding to 1. (3) schematic drawing of 4; (4) transversal section; a”, b” intercepts of a and b of 1 respectively. See Supplemental data set for comments.Supplemental_Data_fig_2Supplemental Data Figure 2. Calculation of α and α’ from an oblique section. (1) oblique section: whorl w’1 is intersected close to the central cavity; generic whorl w’2 is cut amid the calcareous skeleton. (2) intercepts of w’1 and w’2 whorls in transversal section. (3) number of pores valued along two generic whorls (1 and 2) cut amid the calcareous skeleton. OD/OB = O’D’/O’B’= k, central cavity-intercept ratio. See Supplemental text for comments.Supplemental_Data_fig_3Supplemental Data Figure 3. Actinoporella campanensis (Azéma & Jaffrezo) n. comb. Reference oblique section, the holotype, used to estimate the number of pores (w) per whorl.Supplemental_Data_table_1Supplemental Data Table 1. Estimate of w values based on the holotype of Actinoporella campanensis (Azéma & Jaffrezo) n. comb. d, inner diameter; D, outer diameter; k, central cavity-intercept ratio (see Supplemental data set); w’, number of laterals cut by the intercept; w, number of laterals in a whorl.
DOI: 10.5061/dryad.p5k0156
title: Data from: TAPBPR mediates peptide dissociation from MHC class I using a leucine lever

description: Tapasin and TAPBPR are known to perform peptide editing on major
 histocompatibility complex class I (MHC I) molecules, however, the precise
 molecular mechanism(s) involved in this process remain largely enigmatic.
 Here, using immunopeptidomics in combination with novel cell-based assays
 that assess TAPBPR-mediate peptide exchange, we reveal a critical role for
 the K22-D35 loop of TAPBPR in mediating peptide exchange on MHC I. We
 identify a specific leucine within this loop that enables TAPBPR to
 facilitate peptide dissociation from MHC I. Moreover, we delineate the
 molecular features of the MHC I F pocket required for TAPBPR to promote
 peptide dissociation in a loop-dependent manner. These data reveal that
 chaperone-mediated peptide editing of MHC I can occur by different
 mechanisms dependent on the C-terminal residue that the MHC I accommodates
 in its F pocket and provide novel insights that may inform the therapeutic
 potential of TAPBPR manipulation to increase tumour immunogenicity.
description: Auxiliary file 1 -
 Dataset 1 HeLa_TAPBPR-WT_W632Peptide eluted from MHC
 I molecules in HeLaM cells over-expressing TAPBPR-WTAuxiliary file 2 -
 Dataset 1 HeLa_TAPBPR-GSloop _W632Peptides eluted from MHC
 class I molecules from HeLaM cells over-expressing
 TAPBPR-GSloop.Auxiliary file 3 -
 Dataset 1 HeLa_TAPBPR-GSloopG30L_W632Peptide eluted from MHC
 class I molecules from HeLaM cells over-expressing
 TAPBPR-GSloopG30LAuxiliary file 4 -
 dataset 2 HeLa_TAPBPR-WT_W632Peptide eluted from MHC
 class I molecules from HeLaM cells over-expressing
 TAPBPR-WTAuxiliary file 5 -
 dataset 2 HeLa_TAPBPR-GSloop_W632Peptides eluted from MHC
 I molecules from HeLaM cells over-expressing
 TAPBPR-GSloopAuxiliary file 6 -
 dataset 2 HeLa_TAPBPR-GSloopG30L_W632Peptide eluted from MHC
 class I molecules from HeLaM cells over-expressing
 TAPBPR-GSloopG30LAuxiliary file 7a -
 Dataset 1 TAPBPR_Volcano_plotDifferentially modulated
 peptides expressed in HeLaM cells over-expressing TAPBPR-WT, TAPBPR-GSloop
 and TAPBPR-GSloopG30LAuxiliary file 7b -
 Dataset 2 TAPBPR_Volcano_plotDifferentially modulated
 peptides expressed in HeLaM cells over-expressing TAPBPR-WT, TAPBPR-GSloop
 and TAPBPR-GSloopG30LAuxiliary file 8 -
 dataset 2 HeLa_TAPBPR-M29_W632Peptides eluted from MHC
 class I molecules in HeLaM cells over-expression
 TAPBPR-M29Auxiliary file 9 -
 dataset 3 HeLa_TAPBPR-WT_W632Peptide eluted from MHC
 I molecules in HeLaM cells over-expressing TAPBPR-WTAuxiliary file 10 -
 dataset 3 HeLa_TAPBPR-GSloop_W632Peptides eluted from MHC
 class I molecules from HeLaM cells over-expressing
 TAPBPR-GSloop.Auxiliary file 11 -
 Dataset 3 HeLa_TAPBPR-GSloopG30L_W632Peptide eluted from MHC
 class I molecules from HeLaM cells over-expressing
 TAPBPR-GSloopG30L
DOI: 10.5281/zenodo.18390013
title: O'ZBEK TILIDAGI IDIOMALAR: ZAMONAVIY NUTQDAGI FAOLLIGI VA MA'NO O'ZGARISHLARI

description: Ushbu tadqiqot o‘zbek tilidagi idiomalarning zamonaviy nutqda namoyon bo‘layotgan funksional faolligini, ularning tarixiy-ma’naviy qatlamdan hozirgi kommunikativ makonga o‘tish jarayonida yuzaga kelayotgan semantik o‘zgarishlarini hamda ko‘p ma’nolilikka moyillik darajasini kompleks tahlil qiladi. Maqolada idiomalarning ommaviy axborot vositalari, ijtimoiy tarmoqlar, reklama va yoshlar diskursida qayta talqin qilinishi, konnotativ yukining kuchayishi yoki pasayishi, shuningdek, nutqiy pragmatika nuqtayi nazaridan ularning stilistik funksional spektri aniqlanadi.
DOI: 10.5281/zenodo.18390012
title: O'ZBEK TILIDAGI IDIOMALAR: ZAMONAVIY NUTQDAGI FAOLLIGI VA MA'NO O'ZGARISHLARI

description: Ushbu tadqiqot o‘zbek tilidagi idiomalarning zamonaviy nutqda namoyon bo‘layotgan funksional faolligini, ularning tarixiy-ma’naviy qatlamdan hozirgi kommunikativ makonga o‘tish jarayonida yuzaga kelayotgan semantik o‘zgarishlarini hamda ko‘p ma’nolilikka moyillik darajasini kompleks tahlil qiladi. Maqolada idiomalarning ommaviy axborot vositalari, ijtimoiy tarmoqlar, reklama va yoshlar diskursida qayta talqin qilinishi, konnotativ yukining kuchayishi yoki pasayishi, shuningdek, nutqiy pragmatika nuqtayi nazaridan ularning stilistik funksional spektri aniqlanadi.
DOI: 10.5061/dryad.324ch00
title: Data from: Near-infrared spectroscopy for metabolite quantification and species identification

description: Near-infrared spectroscopy (NIRS) is a high-throughput method to analyse
 the near-infrared region of the electromagnetic spectrum. It detects the
 absorption of light by molecular bonds and can be used with live insects.
 In this study, we investigate the accuracy of NIRS in determining
 triglyceride level and species of wild caught Drosophila. We employ the
 chemometric approach to produce a multivariate calibration model. The
 multivariate calibration model is the mathematical relationship between
 the changes in NIR spectra and the property of interest as determined by
 the reference analytical method. Once the calibration model was developed,
 we used an independent set to validate the accuracy of the calibration
 model. The optimized calibration model for triglyceride quantification
 yielded coefficients of determination of 0.73 for the calibration test set
 and 0.70 for the independent test set. Simultaneously, we used NIRS to
 discriminate two species of Drosophila. Flies from independent sets were
 correctly classified into D. melanogaster and D. simulans with accuracy
 higher than 80%. These results suggest that NIRS has the potential to be
 used as a high throughput screening method to assess a live individual
 insect’s triglyceride level and taxonomic status.
description: Near-Infrared
 Spectroscopy for metabolite quantification and species
 identificationRaw NIR spectra for
 triglyceride quantification and species identificationNIRS.zip
DOI: 10.5281/zenodo.18239757
title: Samsung_OHLCV_20200824_20250821
DOI: 10.5061/dryad.3df3059
title: Data from: The evolution of sex determination associated with a chromosomal inversion

description: Sex determination is a fundamentally important and highly diversified
 biological process, yet the mechanisms behind the origin of this diversity
 are mostly unknown. Here we suggest that the evolution of sex
 determination systems can be driven by a chromosomal inversion. We show
 that an XY system evolved recently in particular nine-spined stickleback
 (Pungitius pungitius) populations, which arose from ancient hybridization
 between two divergent lineages. Our phylogenetic and genetic mapping
 analyses indicate that the XY system is formed in a large inversion that
 is associated with hybrid sterility between the divergent lineages. We
 suggest that a new male-determining gene evolved in the inversion in
 response to selection against impaired male fertility in a hybridized
 population. Given that inversions are often associated with hybrid
 incompatibility in animals and plants, they might frequently contribute to
 the diversification of sex determination systems.
description: SSR and phenotype
 dataGenotype and phenotype
 data for the phylogeny, LG12 and mapping analyses.
DOI: 10.5061/dryad.4pv2ft0
title: Data from: Strikingly high levels of heterozygosity despite 20 years of inbreeding in a clonal honey bee

description: Inbreeding (the mating between closely related individuals) has
 detrimental effects that are associated with loss of heterozygosity at
 overdominant loci, and the expression of deleterious recessive alleles.
 However, determining which heterozygous loci are important for individual
 fitness, and the extent of their phenotypic effects remains poorly
 understood. Here, we utilise a unique inbred population of clonal
 (thelytokous) honey bees, Apis mellifera capensis, to determine which
 heterozygous loci are crucial for individual fitness. This population
 arose from a common ancestor approximately 20 years ago and has persisted
 for at least 100 generations. Thelytokous parthenogenesis results in a 1/3
 of loss of heterozygosity with each generation. Yet, this clonal
 population retains heterozygosity throughout its genome due to selection
 against homozygotes. Deep sequencing of three sub-lineages of the
 population revealed that 3,766 of 10,884 genes (34%) have retained
 heterozygosity across all sub-lineages, suggesting that these genes have
 heterozygote advantage. The maintenance of heterozygosity in the same
 genes and genomic regions in all three sub-lineages suggests that nearly
 every chromosome carries genes that show sufficient heterozygote advantage
 to be selectively detrimental when homozygous.
description: Heterozygosity GLMM
 dataUsing this data set we
 fitted a binomial, non-linear, mixed-effects model (GLMM) with a logistic
 link function to assess the effects of genic and intergenic regions,
 chromosome length and distance from the centromere on the probability that
 a window would contain one or more heterozygous SNP. Note: Raw sequence
 data has been uploaded to NCBI. The pipeline for all of the analyses in
 this paper can be found at:
 https://github.com/Social-Insect-Genomics/JEB.heterozygosity.fitness.pipeline).het.glmm.covariate.jeb.csv