cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/3cwxv9swkc
title: Secondary analysis of transcriptomes of SARS-CoV-2 infection models to characterize COVID-19. Ghandikota et al

description: Supplemental dataset associated with our work, "Secondary analysis of transcriptomes of SARS-CoV-2 infection models to characterize COVID-19". In this study, we proposed an integrated network analysis framework that integrates transcriptional gene signatures from multiple model systems with protein-protein interactions to find gene clusters. By performing a meta-analysis of multiple feature types enriched in these gene modules, we extract communities of similar and interconnected features. These higher-order feature clusters, working as a multifeatured machine, enable us to assess their contributions towards a disease or phenotype. We show the utility of our proposed workflow using transcriptomics data from three different models of SARS-CoV-2 infection and identified several pathways and biological processes that could help towards understanding and hypothesizing molecular signatures involved in COVID-19.
DOI: 10.17632/dkfpvn98w4
title: Archived data for: Fisheries restrictions and their cascading effects on herbivore abundance and macroalgae removal at Kenyan coral reefs

description: Dataset for the article "Fisheries restrictions and their cascading effects on herbivore abundance and macroalgae removal at Kenyan coral reefs" including raw Excel data of (1) macroalgae buffet assays and (2) remote underwater video counts.
DOI: 10.17632/pzw38z9ytc
title: Video support research on historical memory Ciudad Bolivar

description: En este proceso de recuperación de la memoria se rescata el trabajo
realizado en el laboratorio de creación artística, en el que niños, niñas
y jóvenes de la localidad han generado un espacio de recuperación
de memoria histórica a partir del ensamblaje de una danza como
resultado del ejercicio de exploración sustentado en la valiosa
información hallada en los distintos -Módulos de la memoria-, cuyas
metodologías diseñadas desde las técnicas de Educación Popular se
implementaron acorde a las características específicas de los grupos
conformados, teniendo en cuenta su nivel de escolaridad, edad,
rasgos socioculturales e intereses; se hizo presencia en ocho sectores
de la localidad, Las Huertas - Perdomo Alto, Nueva Argentina,
Potosí, Paraíso, Bella Flor, Alameda, Arborizadora Baja y Madelena
donde se materializo una apuesta por el diálogo de saberes a través
del encuentro intergeneracional con el circulo de la palabra como
excusa para encontrarse en un espacio donde se pudiera conversar.
DOI: 10.15468/dl.tqpnyj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Taguchi Shellfish Specimens Collection of Tamarokuto Science Center",
 "Country is Croatia"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000406-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/db63h5dp6y
title: Data for: An experimental study of peridotite dissolution in eclogite melts: implications for styles of melt-rock interaction in lithospheric mantle beneath the North China Craton

description: These data are melt and mineral compositions obtained from experiments of reaction between lherzolite and eclogite-derived melt at 1300-1425°C and 2 GPa.
DOI: 10.15468/dl.u7aj77
title: Occurrence Download

description: A dataset containing 379 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Gracilaria cornea J.Agardh"
 ]
}

 The dataset includes 379 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000407-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/6957bwkkf5
title: LINF_140013200

description: Ketoacyl-CoA synthase | fatty acid elongase | ELO-4; Leishmania infantum (strain JPCM5)
DOI: 10.17632/f33pkkx7g4
title: Mechanical properties of Solution-Blended Graphene Nanoplatelets/PEEK Nanocomposites

description: Mechanical properties of Solution-Blended Graphene Nanoplatelets/PEEK Nanocomposites
DOI: 10.17632/22vwv5yk6s
title: Anti-lysozyme Silverbody Data 2022

description: Molecular conformational engineering is to engineer flexible non-functional molecules into unique conformations to create novel functions just like natural proteins fold. Obviously, it is a grand challenge with tremendous opportunities. Based on the fact that natural proteins are only marginally stable with a net stabilizing energy of about two hydrogen bonds, we proposed that the energy barrier for the adatom diffusion can serve as a general replacement of protein scaffolds for the conformational engineering of protein fragments, i.e. to restore the native conformations of protein fragments on nanoparticle surfaces. To prove this hypothesis, herein, we successfully restore the antigen-recognizing function of the flexible peptide fragment of a natural anti-lysozyme antibody on the surface of silver nanoparticles, creating a silver nanoparticle-base artificial antibody (Silverbody). A plausible mechanism is proposed, and some general principles for conformational engineering are summarized to guide the future studies in this new area.
DOI: 10.17632/v4nbn9s232
title: LINF_360008000

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/4d55gzwt4f
title: Attitude toward marriage

description: SPSS and AMOS outputs
DOI: 10.17632/b3g4mkm96v
title: Quantifying the uncertainty in critical resolved shear stress values derived from nano-indentation in hexagonal Ti alloys

description: Foundational data sets of the paper on "Quantifying the uncertainty in critical resolved shear stress values derived from nano-indentation in hexagonal Ti alloys". Measured load--depth response and residual surface topography of single crystal nanoindentations in commercially pure Ti, Ti3Al2.5V, and Ti6Al4V (wt%) at 295 K and 573 K. Optimization framework to adjust initial critical resolved shear stress values by iteratively matching simulated and measured indentation response.
DOI: 10.17632/wp7yk8vtg9
title: Data for the paper "Verified simulation of the stationary polymer fluid flows in the channel with elliptical cross-section"

description: The xlsx files contain the results of numerical simulation of the stationary non-isothermal incompressible viscoelastic polymer fluid flow of Poiseuille type through the channel with elliptical cross-section having an inclusion, which is heating element of elliptical shape. Specifically, the files contain the approximate values of the dimensionless velocity (u) and temperature (Y) of the flow computed in 1 681 data points distributed inside the channel. In the files their coordinates in Cartesian system are denoted by (y,z), and several regimes of flows are considered.

To describe the polymer fluid flow, the generalised mesoscopic Pokrovskii — Vinogradov model was used, and the corresponding Poiseuille-type stationary solutions were found using the non-local method without saturation (NMWS). The detailed description of the model with all parameters and the method can be found in the paper by Boris Semisalov et al. "Verified simulation of the stationary polymer fluid flows in the channel with elliptical cross-section''.

This paper also contains the comparison of the data from xlsx files with the results of simulation obtained using two other methods, which are the least-squares collocation method (LSCM) and the finite element method (FEM), see this comparison in tables 8 — 11 of the paper. 

Thus, the given data represent benchmark for the considered flow of polymer fluid.
DOI: 10.17632/pb7kxry6xr
title: LINF_050010600

description: cdc2-related kinase | CRK2
Leishmania infantum (strain JPCM5)
DOI: 10.17632/pr5zd3kfjy
title: Data for: Spectral tuning of light-harvesting complex II in the siphonous alga Bryopsis corticulans and its effect on energy transfer dynamics (2DES)

description: Two-dimensional electronic spectroscopy data recorded from light-harvesting complex II from Bryopsis corticulans at 77 K and room temperature. Data format: MATLAB 7.3 (HDF5) Field (variable) names: X - detection wavelength (nm) Y - excitation wavelength (nm) T - waiting time (ps) Abs - absorptive signal (Y, X, T) tau - decay lifetime DAS - decay-associated spectrum amplitude
DOI: 10.17632/c98p29m3g9
title: qPCR data - Mid-pregnancy poly(I:C) viral mimic disrupts placental ABC transporter expression and leads to long-term offspring motor and cognitive dysfunction 

description: Abstract: Limited information is available about the effect of mid-pregnancy viral infections on the placental expression of efflux transporters and offspring behavior. We hypothesized that maternal exposure to polyinosinic-polycytidylic acid [poly(I:C)], a synthetic double-stranded RNA viral mimic, would impair placental cell turnover, the expression of selected ABC transporters and adult offspring behavior. C57BL/6 mice were administered poly(I:C) (10mg/Kg;ip) or vehicle at gestational day (GD) 13.5 (mid-pregnancy). Dams were euthanized for blood collection 4 h after injection, fetal and placental collection at GD18.5 or allowed to deliver spontaneously at term. At GD 13.5, poly(I:C) induced an acute pro-inflammatory response characterized by an increase in maternal plasma levels of IL-6, CXCL-1 and CCL-2. At GD 18.5, poly(I:C) decreased cell proliferation/death in the labyrinthine and increased cell death in the junctional zones, a disruption of placental cell turnover. Abca1 and Abcg1 immunolabelling was decreased in the labyrinthine zone, but Abca1, Abcg1 and breast cancer resistance transporter (Bcrp) expression increased in the junctional zone. Moreover, adult offspring showed motor and cognitive impairments in the Rotarod and T-water maze tests. These results indicate that viral infection during mid-pregnancy may disrupt the placental barrier and offspring behavior in adult life.

For quantification of qPCR data, the LinRegPCR program was used according to Ruijter et al. (2009). Samples that did not pass in the quality checks of LinReg software (no amplification, no plateau, PCR efficiency outside 10%, excluded from mean Eff) were removed from the analysis. The reference genes were chosen according to their Cq values and variances between the groups. Gene expression was normalized to the geometric mean of reference genes, B2m and Pol2a.

To see the other results please click in the link to access the full paper: LINK.
DOI: 10.17632/h7wf6pd355
title: Trends in production and consumption of selected biofortified crops by rural communities in Zimbabwe

description: This study sought to assess trends in production and consumption of bio-fortified crops by rural communities with the view of improving nutrition in rural communities of Zimbabwe. Mixed research approach was employed. The study triangulated quantitative and qualitative research methodologies. Focus Group Discussions (FGDs) with farmers and District Food and Nutrition Security Committee (DFNSC) members. Key informant interviews were used to collect qualitative data whilst the survey method collected quantitative data. Secondary data on production of crops was gathered from the Agriculture Technical and Extension Services Department (AGRITEX).Statistical Package for Social Sciences (SPSS) version 21 was used to analyze quantitative data on evaluating the adoption rate of orange maize production and consumption view by rural communities of Zimbabwe. Data was entered on SPSS and data cleaning was executed on errors identified and were corrected. Data ranges in numerical values were used to eliminate erroneous data as a result of mistakes made during coding. Descriptive statistics were run on SPSS to generate frequencies and percentages of the knowledge and source of knowledge about biofortified crops, production and consumption levels of biofortified crops, taste preferences, source of seed for biofortified crops and marketing of biofortified crops produce. The findings were presented in form of graphs and tables. Qualitative data obtained during the FGDs and key informant interviews was transcribed and typed. Themes pertaining to evaluation of the adoption rate of biofortified crops production and consumption by rural communities were identified. The findings expanded the findings from the quantitative data as well as complementing explanations obtained from household questionnaires. Quotes were also used to present the data.The study noted that production of biofortified crops and consumption was low. However, a plethora of factors were highlighted to be the major hindrances to the production and consumption of biofortified crops. These were unavailability of biofortified seeds, poor yields of the orange maize variety, low producer price at the Grain Marketing Board, unable to distinguish yellow maize from orange maize and distance to seed markets. Due to low production trends, few people had consumed biofortified beans and orange maize.
DOI: 10.17632/98xk988h7d
title: Democracy Scores for Summit for Democracy II

description: Data compiled from Freedom House Global Freedom Scores and Varieties of Democracy Project Liberal Democracy Index. Purpose of the data is to provide a comparative analysis of country democratic performance between 2020 and 2022 for states participating in the U.S. government-organized Summit for Democracy II.
DOI: 10.17632/j2mgnjybrr
title: Investigating Enhanced Image Feature Engineering for Cataract Detection: A Comparative Analysis of Random Forest and XGBoost Approaches with Multi-Filter Combinations.

description: It shows pixel values extracted and stored in a dataFrame after texture analysis of fundus image using
DOI: 10.17632/7mgp8bktht
title: Dados sobre a área inundada dos açudes monitorados no Ceará - Brasil

description: Aqui estão os dados do açudes monitorados no estado do Ceará, Brasil. Os dados são da cota, volume e área e a construção de curva de permanência para cada açude. Os dados são desde quando cada açude começou a ser monitorado até o ano de 2020.
DOI: 10.17632/9x7szfz8kc
title: Deep CNN for single-cell classification based on pH fingerprints 

description: The research goal was to leverage intracellular structural features together with intracellular pH patterns in order to classify different types of bladder cancer cells using Deep Learning. Specifically, the Deep Convolutional Neural Network (CNN)-based strategy was used to classify individual cells from the RT4 and J82 bladder cancer cell lines upon staining with a pH-sensitive dye (Bromothymol Blue) and bright-field imaging using a digital color camera mounted on a standard inverted microscope. J82 and RT4 cells were imaged using a 40x objective after the internalization of Bromothymol Blue.
DOI: 10.17632/dtf2w3f84c
title: Akama-Garren et al 2023 "Regulation of immunological tolerance by the p53-inhibitor iASPP" data supporting figures 1-4

description: Raw imaging data that was used to generate the figures main 1-4 for Akama-Garren et al. 2023 "Regulation of immunological tolerance by the p53-inhibitor iASPP" . Please refer to the paper in Cell Death & Disease for more explanation.
All ChIP-seq and mNET-seq data generated in this study have been deposited in the GEO database and are available under primary accession number GSE202445. RNA-seq data generated in this study have been deposited in the GEO database and are available under primary accession number GSE218389. Any additional information required to reanalyse the data reported in this paper is available from the lead contacts upon request..
DOI: 10.17632/p9h32znk34
title: Data-Interactive effect

description: This is the primary data collected by researchers for the particular study. This data is not published and used by others except in this study. Data has measured variables like Supportive supervision, non-controlling supervision, careerist orientation, creativity, and respondents' demographic details. Data can be used to measure the direct effect of supervisory style on subordinates' creativity and the interactive effect of supervisory style (supportive and non-controlling supervision) and careerist orientation on creativity. Data showed a positive effect of supportive supervision on creativity, a negative effect of non-controlling supervision on creativity, and a moderating effect of careerist orientation in the relationship between supervisory styles (supportive and non-controlling supervision)  and subordinates' creativity. Fundamentally, the data is used to test a new model that is quite complex to show the interaction of supervisory style, careerist orientation, and creativity.
DOI: 10.17632/5wpcrnkvc7
title: Selection-driven tumor evolution involving non-cell growth promotion leads to patterns of clonal expansion consistent with neutrality interpretation. Edwards et al.

description: This contains the data used to produce the figures in the publication: https://doi.org/10.1016/j.isci.2020.101901. This data is reproducible from the model files located at https://github.com/jackedwards1/CE_ABM.
DOI: 10.17632/j4m9nyy3fb
title: LINF_320016400

description: small nuclear ribonucleoprotein | SmG
Leishmania infantum (strain JPCM5)
DOI: 10.17632/9frwpy5vz9
title: Data for: A heuristic underlies the search for relief in Drosophila melanogaster

description: The "Main Text" datasets can be used to reproduce the findings reported in figures 1 and 2 (up to panel J). 
The "Panel On" dataset regards the results reported in figure 2K-L.
DOI: 10.17632/fd66v3p9wn
title: Experimental Data for GTC in Natural Convection Mode

description: The data presented were for the experimental study of a glazed transpired solar collector (GTC) in natural convection mode. Transpired solar collectors used as air heaters require adequate pressure difference across the collector for practical application. In most cases an electric fan of suitable power is deployed to achieve the required pressure difference. This is the forced convection application. In a natural mode of application a chimney of appropriate height is required and buoyancy forces in the collector and chimney produce the required pressure difference across the collector.  An experimental rig was set up in the field and data was collected for a period of 6 months. Data represents average values of variables. The variables included chimney height, ambient air temperature, collector air temperature, absorber temperature, collector air outlet velocity, solar radiation and absorber hole pitch to hole diameter ratio (P/D). Five absorber plates having hole diameters of 1.0mm, 1.5mm, 2.0mm, 2.5mm and 3.0mm were used and the chimney heights were 4.04m, 5.04m, 6.04m, 7.04m and 8.04m. The absorber that had 3.0mm hole diameter gave the highest effeciency of 75.4% at a chimney height of 8.04m.
DOI: 10.17632/m76g7z987w
title: LINF_170010200

description: protein kinase Leishmania infantum (strain JPCM5)
DOI: 10.17632/5835f4st6j
title: Data for: Juvenile stress disrupts the development of an exploration-boldness behavioural syndrome in convict cichlid fish.

description: data for "Juvenile stress disrupts the development of an exploration-boldness behavioural syndrome in convict cichlid fish."
DOI: 10.17632/6z7cm9gbbp
title: LINF_280006500

description: RNA binding protein | Nop15; Leishmania infantum (strain JPCM5)
DOI: 10.17632/4tfzkjc86b
title: ANÁLISIS A LA PERCEPCION DE LA ESTRATEGIA COMUNICATIVA DE WOM A SU LLEGADA A COLOMBIA EN ESTUDIANTES DE 7 SEMESTRE DE PUBLICIDAD DEL AÑO 2024 DE LA UNIVERSIDAD SANTIAGO DE CALI  

description: proyecto de grado para titulo de publicista
DOI: 10.17632/rv9kgtcjpv
title: Essential roles of RNA cap-proximal ribose methylation in mammalian embryonic development and fertility

description: Raw data used for preparation of figures. Western blot scans, microscopy images of histological sections.
DOI: 10.17632/t9k5rh4zy4
title: experimental study on flexural buckling of timber

description: Experimental study on flexural buckling of timber
DOI: 10.17632/3xts2ms935
title: Exosomal miR-145-5p promotes apoptosis of renal tubule epithelial cells through the JNK signalling pathway. Pu Mao et al

description: This dataset contains the files (data and codes) needed to replicate our results in the study titled as " Exosomal miR-145-5p promotes apoptosis of renal tubule epithelial cells through the JNK signalling pathway ".
DOI: 10.17632/gt4b4c52nh
title: Practicing mindfulness amid the COVID-19 pandemic: Using photovoice to understand healthcare professionals' experiences

description:  A four-week online MBI intervention for HPs was designed and implemented using the Zoom platform. An exploratory qualitative analysis of the HPs’ experiences over the four weeks was conducted using a photovoice methodology. Using interpretative phenomenological analysis (IPA), subthemes were generated. The major themes identified were disengaging the autopilot, stress, acceptance and self-care, with subthemes time pressure, mindless movement, anxiety, helplessness, empowerment, faith, and change in relationship to self and environment.
DOI: 10.17632/rrsxfwktmv
title: business group contagion effect in china

description: Considering the limitation of data sources and referring to previous studies, this paper defines that when the actual controller of a listed company controls two or more listed companies at the same time, the listed company belongs to a business group. Based on the 2007-2019 Shanghai and Shenzhen A share listed companies’ samples, and according to the ownership structure chart disclosed in the company’s annual report, this paper determines whether a company belong to a business group and select the group-holding listed company as the research samples (Buchuk et al., 2014; Na et al., 2017). A-share listed companies in China generally have specific actual controllers. Consider the differences between state-owned firms and private firms, this paper defines the actual controllers of state-owned firms are the economic entity that closest to the governments in ownership structure charts. The actual controllers of private firms are the natural persons who control the listed company. This paper does not choose the government institutions as the controllers of SOEs are because by this definition, all the SOEs will belong to one group, which are going against our economic intuition. Then this paper excludes the group-holding samples of financial companies and with insufficient financial data to obtain control variables. Finally, this paper obtains 6693 firm-year observations from 2007 to 2019 with the necessary data to conduct our analysis. The data required in this paper comes from the CSMAR database and WIND database. To mitigate the effects of outliers, this paper winsorizes continuous variables at the 1% level in both tails. This paper performs Logit regression to study the contagion effect of overconfidence, performs PSM and controls firm level fixed effect to alleviate potential endogenous problems. The form of the data is widely used in the research of business group management and governance in both China and other countries (He et al., 2013; Buchuk et al., 2014), and this paper believes this data can continuously support the future research in this field.