cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.z4rmq8
title: Occurrence Download

description: A dataset containing 481244 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2010-2022"
 ]
}

 The dataset includes 481244 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117524-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ilixx
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Vigna venusta (Piper) Maréchal, Mascherpa & Stainier",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 31 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015438-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ppcbca
title: Occurrence Download

description: A dataset containing 6485 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Eucalyptus rubida H.Deane & Maiden",
 "TaxonKey is Eucalyptus rudis Endl."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6485 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012967-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zft1bo
title: Occurrence Download

description: A dataset containing 784 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poecilia caucana (Steindachner, 1880)"
 ]
}

 The dataset includes 784 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015438-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9xczbh
title: Occurrence Download

description: A dataset containing 3740 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cuscuta planiflora Ten."
 ]
}

 The dataset includes 3740 records from 146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117523-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8lclhr
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hechtia iltisii Burt-Utley & Utley"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012968-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4dsjfo
title: Occurrence Download

description: A dataset containing 821 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Vigna adenantha (G.Mey.) Maréchal, Mascherpa & Stainier",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 821 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015439-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xzv3y5
title: Occurrence Download

description: A dataset containing 32344 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-6.10291 37.10585,-6.21277 36.93919,-6.37756 36.84254,-6.44348 36.68411,-6.31165 36.57832,-6.24573 36.46354,-6.06995 36.20688,-5.90515 36.12706,-5.56458 35.99384,-5.31189 36.16255,-5.18005 36.42819,-4.88342 36.49004,-5.08118 37.06203,-5.69641 37.18466,-6.10291 37.10585))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 32344 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0118144-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jem4px
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glironia venusta Thomas, 1912"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012968-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejrjum
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alyssum caespitosum Jos.Baumgartner"
 ]
}

 The dataset includes 24 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035697-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n9btse
title: Occurrence Download

description: A dataset containing 73065 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ramosomyia violiceps (Gould, 1859)"
 ]
}

 The dataset includes 73065 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058913-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6thqko
title: Occurrence Download

description: A dataset containing 1003 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Nassella cernua (Stebbins & Love) Barkworth"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1003 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015439-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.emacqp
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Mexico",
 "Country is United States of America"
 ]
 },
 {
 "or" : [
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "PublishingOrg is 5ffa575c-fcd4-4583-9611-545f67b04316"
 ]
 },
 "Issue is Geodetic datum assumed WGS84",
 "Year 1950-2010",
 {
 "or" : [
 "InstitutionCode is inaturalist",
 "InstitutionCode is borror laboratory of bioacoustics, ohio state university, columbus, oh (blb)"
 ]
 },
 "TaxonKey is Quiscalus mexicanus (Gmelin, 1788)",
 {
 "or" : [
 "MediaType is Image",
 "MediaType is Audio"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 119 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012969-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/v8jq7g
title: DNA barcoding reveals new records of invasive terrestrial flatworms (Platyhelminthes, Tricladida, Geoplanidae) in the Macaronesian region

description: This dataset contains the digitized treatments in Plazi based on the original journal article Suárez, Daniel, Pedrianes, Juan Ramón, Andújar, Carmelo (2022): DNA barcoding reveals new records of invasive terrestrial flatworms (Platyhelminthes, Tricladida, Geoplanidae) in the Macaronesian region. Zootaxa 5129 (3): 447-450, DOI: 10.11646/zootaxa.5129.3.9
DOI: 10.15468/uwc3kx
title: Vocalizations of three species of Plectrohyla (Hylidae: Hylinae), with comments on natural history

description: This dataset contains the digitized treatments in Plazi based on the original journal article Chaves-Acuña, Wagner, Zúniga, Javier, Boza-Oviedo, Eduardo (2025): Vocalizations of three species of Plectrohyla (Hylidae: Hylinae), with comments on natural history. Zootaxa 5665 (3): 423-434, DOI: 10.11646/zootaxa.5665.3.7, URL: https://doi.org/10.11646/zootaxa.5665.3.7AbstractVocalizations of many species in the genus Plectrohyla Brocchi, 1877 remain underexplored. This study provides a description of the vocalizations of P. catracha (Porras & Wilson, 1987) and P. insolita (McCranie et al., 1993) and the re-description of the call of P. ixil Stuart, 1942. The advertisement call of P. catracha is a short pulsed call with ascending amplitude modulation, duration of 41 ± 8 ms (20–80 ms), dominant frequency of 2,761 ± 151 Hz (2,411 –3,100 Hz), and pulse rate of 101 ± 13 pulses/s (67–150 pulses/s). The territorial call consists of a repertoire of short trills emitted in brief series of 3–6 calls, each with a duration of 15 ± 6 ms (4–20 ms), dominant frequency of 2,725 ± 410 Hz (2,067 –3,100 Hz), and pulse rate of 158 ± 55 pulses/s (100–250 pulses/s). The series of territorial calls last 650 ± 110 ms (480–840 ms). Plectrohyla catracha vocalizes from vegetation and water surfaces, with peak activity during the rainy season. The advertisement call of P. insolita is a short, “click” sound and consists of a single, pulsatile call with descending amplitude modulation, duration of 60 ± 10 ms (50–70 ms), and dominant frequency of 1,894 ± 172 Hz (1,722 –2,067 Hz). Plectrohyla insolita is less frequently encountered, calling from elevated positions over streams while also displaying egg-attendance of multiple clutches. Plectrohyla ixil produces a long, single, pulsatile call with ascending amplitude modulation, duration of 244 ± 28 ms (220–280 ms), and dominant frequency of 1,274 ± 83 Hz (1,125 –1,312 Hz). We assessed the variation within the known acoustics of the clade composed by Plectrohyla, Sarcohyla Duellman et al., 2016 and Exerodonta Brocchi, 1879, and discuss some patterns in call parameters among species of these genera and other Hylini.
DOI: 10.15468/hg6m42
title: Two new species and a new combination in Pleroma (Melastomataceae) from the Brazilian Atlantic Forest

description: This dataset contains the digitized treatments in Plazi based on the original journal article Meyer, Fabrício Schmitz, Arantes, Fabíula Moreno, Goldenberg, Renato (2024): Two new species and a new combination in Pleroma (Melastomataceae) from the Brazilian Atlantic Forest. Phytotaxa 638 (3): 209-226, DOI: 10.11646/phytotaxa.638.3.1, URL: http://dx.doi.org/10.11646/phytotaxa.638.3.1AbstractPleroma littorale is a new species described from several specimens collected in the Brazilian states of São Paulo, Paraná and Santa Catarina. It is morphologically similar to Pleroma urvilleanum, but differs by the cucullate bracteoles, with the apex obtuse and covering the flower bud (vs. ovate, with the apex acute and not covering the flower bud), and sepals with an obtuse apex (vs. attenuate). Pleroma semisterile is a new species described from six specimens collected in Pancas, state of Espírito Santo. It is morphologically similar to Pleroma fontanae, but differs by the longer petioles, 19–51.3 mm long (vs. 3.3–12.6 mm long), the antepetalous stamens with pedoconective and appendages covered by glandular trichomes (vs. glabrous), and narrower fruits, 5.5–6 mm wide (vs. 8.1–8.9 mm). One remarkable feature of the latter species is the androecium with apparently well-formed antesepalous stamens that do not produce pollen and are consequently staminoidal. This character has not been previously mentioned for species in Pleroma, but it may have been overlooked in species that are morphologically related to P. semisterile, such as P. fontanae, P. magdalenense, and P. manicatum. Finally, we also present the new combination Pleroma magdalenense, for a species originally described under Tibouchina that has been treated as a synonym of P. heteromallum.
DOI: 10.15468/dl.jrcsjc
title: Occurrence Download

description: A dataset containing 184 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((3.31616 43.00941,4.3022 43.00941,4.3022 43.70112,3.31616 43.70112,3.31616 43.00941))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cheloniidae",
 "Year 2010-2025"
 ]
}

 The dataset includes 184 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040044-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30197509.v1
title: Mechanism by which glabridin combined with β-lactam antibiotics attenuates MRSA pathogenicity and drug resistance

description: The novelty of this study lies in the discovery that the natural product glabridin (Glb) acts as a multi-target inhibitor. It directly binds to AgrA and AgrC proteins, effectively blocks the quorum sensing system, and thereby significantly downregulates the expression of key virulence factors such as alpha-hemolysin. More importantly, Glb in combination with ampicillin or cephalexin synergistically reduces the IC50 of the antibiotics and inhibits bacterial growth by disrupting cell wall synthesis. In vivo experiments further confirmed that the combination therapy effectively reduced lung injury and inflammation in a mouse model of MRSA-induced pneumonia.
DOI: 10.17638/datacat.liverpool.ac.uk/3041
title: Data from: Experimental model to quantify nanoparticle interaction with cell monolayers

description: Raw video files of optical caustic signatures produced by gold spherical nanoparticles diffusing above a cell monolayer in cell culture media solutions
DOI: 10.6084/m9.figshare.30265513
title: <b>Raw data in metabolomic profiling and analysis</b>

description: In this study, we identify a significant induction of a CD81+ erythroblast subpopulation in the spleens of an AML mouse model, which can promote AML cell proliferation and reduce mice survival. To investigate the metabolic alterations induced by CD81+ Erys co-culture, AML cells (NT or Egln3_KO) were cultured under three different conditions: co-cultured with CD81+ Erys, co-cultured with CD81− Erys, or cultured alone. AML cells were lysed to extract intracellular metabolites for liquid chromatography-mass spectrometry (LC-MS) analysis after co-cultured.
DOI: 10.6084/m9.figshare.30265513.v1
title: <b>Raw data in metabolomic profiling and analysis</b>

description: In this study, we identify a significant induction of a CD81+ erythroblast subpopulation in the spleens of an AML mouse model, which can promote AML cell proliferation and reduce mice survival. To investigate the metabolic alterations induced by CD81+ Erys co-culture, AML cells (NT or Egln3_KO) were cultured under three different conditions: co-cultured with CD81+ Erys, co-cultured with CD81− Erys, or cultured alone. AML cells were lysed to extract intracellular metabolites for liquid chromatography-mass spectrometry (LC-MS) analysis after co-cultured.
DOI: 10.15468/dl.e45j5x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cerithium nesioticum",
 "Country is Cyprus",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040047-250920141307145/datasets/export for details.
DOI: 10.15468/dl.yey2tr
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cerithium nesioticum",
 "Country is Israel",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040048-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17251346
title: Taxa Lookup

description: The Taxa Lookup database contians information and classificaitons on biological taxa. Use the R-package taxalook to directly access the data. The data can also be downloaded here.
DOI: 10.25403/upresearchdata.29669834
title: Genes for dimethylsulfoniopropionate production and degradation in the Southern Ocean and Atlantic Ocean

description: The data contain all relevant metadata and genes encoding for the production and degradation of dimethylsulfoniopropionate in the Southern Ocean and Atlantic Ocean. These microbial metabolic pathways play a profound role in the ecosystem and contribute to the climate system. This data shows the distribution and abundance of these key microbial pathways, and they are also correlatable with metadata provided, which aids in more environmental insight into these microbial processes.
DOI: 10.25403/upresearchdata.29669834.v1
title: Genes for dimethylsulfoniopropionate production and degradation in the Southern Ocean and Atlantic Ocean

description: The data contain all relevant metadata and genes encoding for the production and degradation of dimethylsulfoniopropionate in the Southern Ocean and Atlantic Ocean. These microbial metabolic pathways play a profound role in the ecosystem and contribute to the climate system. This data shows the distribution and abundance of these key microbial pathways, and they are also correlatable with metadata provided, which aids in more environmental insight into these microbial processes.
DOI: 10.5281/zenodo.16628409
title: Mapping habitat suitability of subtidal mussels Mytilus edulis in the Dutch western Wadden Sea

description: Understanding environmental predictor variables of species occurrence may contribute to conservation management. In this paper we test the use of a spatial binomial model, estimated with the combined INLA-SPDE method, to relate the probability of occurrence of the mussel Mytilus edulis in the subtidal part of the western Dutch Wadden Sea in the period 1992-2022, to a range of environmental and human-impact related variables. Salinity and orbital velocity appeared to be the most important driving variables, and maximum probability of occurrence was predicted at intermediate salinity levels around 22 PSU and low orbital velocity. Mussel occurrence was also lower in the shipping lanes that are regularly dredged. One of the hypotheses is that at lower salinity physiological stress occurs, but that at higher salinity levels predation limits the occurrence. The spatial structure of the unexplained variation is described by a Gaussian field, but it remained unclear what the type of underlying explanatory mechanisms could have been that some areas had much lower probability of occurrence than expected on the basis of environmental conditions. Further understanding of these observed patterns, for example by including temporal dynamics or experimentally testing settlement limitations, could benefit future decision making for conservation management.
DOI: 10.5281/zenodo.16628410
title: Mapping habitat suitability of subtidal mussels Mytilus edulis in the Dutch western Wadden Sea

description: Understanding environmental predictor variables of species occurrence may contribute to conservation management. In this paper we test the use of a spatial binomial model, estimated with the combined INLA-SPDE method, to relate the probability of occurrence of the mussel Mytilus edulis in the subtidal part of the western Dutch Wadden Sea in the period 1992-2022, to a range of environmental and human-impact related variables. Salinity and orbital velocity appeared to be the most important driving variables, and maximum probability of occurrence was predicted at intermediate salinity levels around 22 PSU and low orbital velocity. Mussel occurrence was also lower in the shipping lanes that are regularly dredged. One of the hypotheses is that at lower salinity physiological stress occurs, but that at higher salinity levels predation limits the occurrence. The spatial structure of the unexplained variation is described by a Gaussian field, but it remained unclear what the type of underlying explanatory mechanisms could have been that some areas had much lower probability of occurrence than expected on the basis of environmental conditions. Further understanding of these observed patterns, for example by including temporal dynamics or experimentally testing settlement limitations, could benefit future decision making for conservation management.
DOI: 10.15468/dl.2kp6pm
title: Occurrence Download

description: A dataset containing 1938 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Copaifera martii"
 ]
}

 The dataset includes 1938 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040050-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5d99ky
title: Occurrence Download

description: A dataset containing 536 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vespidae",
 "Year is 1900",
 "Continent is Europe",
 "HasCoordinate is true"
 ]
}

 The dataset includes 536 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040051-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q9jk62
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cycloscala hyalina",
 "Country is Cyprus",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040052-250920141307145/datasets/export for details.
DOI: 10.15468/dl.ekthbr
title: Occurrence Download

description: A dataset containing 316 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Moss species from Heard Island, 1987 and 2000"
 ]
}

 The dataset includes 316 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040053-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fw3ask
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Penstemon tubiflorus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 },
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040055-250920141307145/datasets/export for details.
DOI: 10.15468/dl.ghb8te
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cycloscala hyalina",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040054-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.