cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive156776.20191129.4.1
title: Anaerotruncus colihominis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156777.20191129.4.1
title: Globicatella sanguinis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156778.20191129.4.1
title: Dialister micraerophilus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive156779.20191129.4.1
title: Abiotrophia defectiva

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5517/ccdc.csd.cc281g5z
title: CCDC 2086770: Experimental Crystal Structure Determination

description: Related Article: Amelia G. Reid, Shelby L. Hooe, Juan J. Moreno, Diane A. Dickie, Charles W. Machan|2022|Inorg.Chem.|61|16963|doi:10.1021/acs.inorgchem.2c02013
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28l322
title: CCDC 2102763: Experimental Crystal Structure Determination

description: Related Article: Weiping Wu, Xuan Wu, Shuaixin Fan, Jin Zhu|2022|Org.Lett.|24|7850|doi:10.1021/acs.orglett.2c03288
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ltp58
title: CCDC 1484440: Experimental Crystal Structure Determination

description: Related Article: Jun Morikubo, Taro Tsubomura|2022|Inorg.Chem.|61|17154|doi:10.1021/acs.inorgchem.2c02662
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ltp47
title: CCDC 1484439: Experimental Crystal Structure Determination

description: Related Article: Jun Morikubo, Taro Tsubomura|2022|Inorg.Chem.|61|17154|doi:10.1021/acs.inorgchem.2c02662
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29dfbh
title: CCDC 2127106: Experimental Crystal Structure Determination

description: Related Article: Qijuan Xiong, Kaipeng Zhao, Yuling Cheng, Changjun He, Yuting Lai, Mengyun Shi, Xin Ming, Feng Jin, Dongliang Tao, Rongbao Liao, Yong Liu|2022|Spectrochim.Acta,Part A|286|122012|doi:10.1016/j.saa.2022.122012
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7266845
title: Segmentations of carcinogenic DNA damages in WSI

description: The dataset includes patches from WSI images of the carcinogenic DNA damages caused by ultraviolet (UV) radiation on excised abdominal human skin, excised porcine skin and in vitro skin models with different melanin indices. Two predominant types of DNA damage are featured in this dataset: Cyclobutane pyrimidine dimers (CPD) and pyrimidine (6-4) pyrimidone photoproducts (6-4PP). The dataset spans 804 patches. A regression score, concerning the relative amount of damaged nuclei was annotated for all samples, segmentation maps were annotated for a subset of 202 samples. All files were anonymized and processed in accordance with the institutional guidelines and cannot be traced back to an individual person.
DOI: 10.5281/zenodo.7266846
title: Segmentations of carcinogenic DNA damages in WSI

description: The dataset includes patches from WSI images of the carcinogenic DNA damages caused by ultraviolet (UV) radiation on excised abdominal human skin, excised porcine skin and in vitro skin models with different melanin indices. Two predominant types of DNA damage are featured in this dataset: Cyclobutane pyrimidine dimers (CPD) and pyrimidine (6-4) pyrimidone photoproducts (6-4PP). The dataset spans 804 patches. A regression score, concerning the relative amount of damaged nuclei was annotated for all samples, segmentation maps were annotated for a subset of 202 samples. All files were anonymized and processed in accordance with the institutional guidelines and cannot be traced back to an individual person.
DOI: 10.5281/zenodo.7282326
title: Segmentations of carcinogenic DNA damages in WSI

description: The dataset includes patches from WSI images of the carcinogenic DNA damages caused by ultraviolet (UV) radiation on excised abdominal human skin, excised porcine skin and in vitro skin models with different melanin indices. Two predominant types of DNA damage are featured in this dataset: Cyclobutane pyrimidine dimers (CPD) and pyrimidine (6-4) pyrimidone photoproducts (6-4PP). The dataset spans 804 patches. A regression score, concerning the relative amount of damaged nuclei was annotated for all samples, segmentation maps were annotated for a subset of 202 samples. All files were anonymized and processed in accordance with the institutional guidelines and cannot be traced back to an individual person.
DOI: 10.5445/ir/1000150470
title: Research data to the article "Measurement of the filling degree and droplet size of individual double emulsion droplets using Raman technologies"

description: Double emulsions arouse great interest in various industries due to their ability to encapsulate value-adding ingredients. However, they tend to be unstable due to their complex structure. Several measurement techniques have already been developed to study and monitor the stability of double emulsions. Especially for the measurement of the filling degree of double emulsions, there is no reliable measuring method available so far. In this paper, a measurement system is presented that can measure the filling degree of W/O/W – double emulsions both spectrometrically and pho-tometrically. It is based on the Raman effect, does not require any sample preparation and the measurement has no negative influence on the double emulsion. It is shown that both spectrometric and photometric Raman techniques can reliably distinguish between double emulsions with filling degrees of 0,5 % difference. Additionally, oil droplet sizes can be measured photometrically. Furthermore, the measurement system can be integrated into emulsification processes both in- and online.
DOI: 10.57745/0iqc0h
title: metadata.tab

description: :unav
DOI: 10.57745/mbauoj
title: methods.xlsx

description: :unav
DOI: 10.57745/w3isiw/55yty1
title: methods.tab

description: :unav
DOI: 10.57745/h2enwg
title: methods.xlsx

description: :unav
DOI: 10.6084/m9.figshare.19915300
title: Encroachment and Removal dataset

description: A dataset on shrub encroachment and removal for supporting the paper "<strong>The success of woody plant removal depends on encroachment stage and plant traits</strong>" by Jingyi Ding and David Eldridge
DOI: 10.6084/m9.figshare.17198260
title: Clonal groups of extended-spectrum β-lactamase and biofilm producing uropathogenic <i>Escherichia coli</i> in Iran

description: Pathogenicity of a bacterium is affected by the social characteristics of the population and environmental factors. The ability of biofilm formation among β-lactamase-producing uropathogenic <i>Escherichia coli</i> (UPEC) could facilitate the exchange of antibiotic-resistance genes, which resulted in widespread dissemination of antibacterial drug resistance. We investigated the prevalence of biofilm and β-lactamase producing UPECs among patients with urinary tract infection (UTI) in two cities with different demographics and climates in Iran. A total of 265 <i>E. coli</i> was isolated from patients with UTIs from two referral hospitals (n = 191) and two outpatient clinics (n = 74) in Isfahan and Zahedan, Iran. Production of curli and cellulose, and, biofilm formation was investigated using Congo red agar and microtiter plate methods, respectively. Biofilm producing (BFP) isolates (n = 107) were further characterized using rep-PCR, antimicrobial susceptibility testing and extended-spectrum β-lactamase (ESBL)/AmpC phenotypic production. Isolates were also screened for the presence of carbapenemase, ESBL and AmpC genes using multiplex PCR. High diversity was found among BFP strains in both cities, with 58% strains producing ESBL and 21% producing AmpC. ESBL (98%), AmpC (50%) and carbapenemase genes (40%) were identified in BFP strains with ESBL-positive phenotype, respectively. The prevalence of BFP strains, antibiotic resistance and β-lactamase genes in Zahedan, a low socioeconomic city with a warm climate, was significantly higher than that of Isfahan. High prevalence of biofilm and β-lactamase producing UPEC strains among strains from Zahedan suggests that socioeconomic status and environmental factors might have a role in pathogenicity of the strains.
DOI: 10.6084/m9.figshare.17198260.v1
title: Clonal groups of extended-spectrum β-lactamase and biofilm producing uropathogenic <i>Escherichia coli</i> in Iran

description: Pathogenicity of a bacterium is affected by the social characteristics of the population and environmental factors. The ability of biofilm formation among β-lactamase-producing uropathogenic <i>Escherichia coli</i> (UPEC) could facilitate the exchange of antibiotic-resistance genes, which resulted in widespread dissemination of antibacterial drug resistance. We investigated the prevalence of biofilm and β-lactamase producing UPECs among patients with urinary tract infection (UTI) in two cities with different demographics and climates in Iran. A total of 265 <i>E. coli</i> was isolated from patients with UTIs from two referral hospitals (n = 191) and two outpatient clinics (n = 74) in Isfahan and Zahedan, Iran. Production of curli and cellulose, and, biofilm formation was investigated using Congo red agar and microtiter plate methods, respectively. Biofilm producing (BFP) isolates (n = 107) were further characterized using rep-PCR, antimicrobial susceptibility testing and extended-spectrum β-lactamase (ESBL)/AmpC phenotypic production. Isolates were also screened for the presence of carbapenemase, ESBL and AmpC genes using multiplex PCR. High diversity was found among BFP strains in both cities, with 58% strains producing ESBL and 21% producing AmpC. ESBL (98%), AmpC (50%) and carbapenemase genes (40%) were identified in BFP strains with ESBL-positive phenotype, respectively. The prevalence of BFP strains, antibiotic resistance and β-lactamase genes in Zahedan, a low socioeconomic city with a warm climate, was significantly higher than that of Isfahan. High prevalence of biofilm and β-lactamase producing UPEC strains among strains from Zahedan suggests that socioeconomic status and environmental factors might have a role in pathogenicity of the strains.
DOI: 10.25429/sns.it/lettere/oltreplinio0001
title: Pliniografia
title: Pliniography

description: The database aims at offering a comprehensive and up-to-date scientific bibliography on Pliny the Elder and his work in all research areas. This bibliography is not a mere list of titles, but a flexible tool for exploring the wide world of Pliny the Elder and for carrying out effective queries throughout a veritable mare magnum. Each record of this database includes not only the main data of the bibliographical reference (e.g. Author, Title), but also a brief description of the contents, and, if available, the link to the online version of the contribution and a list of reviews (with the link, if online). Moreover, records are accompanied by tags that highlight the keywords associated to the entry.
description: Questo strumento mira a offrire una raccolta bibliografica completa e aggiornata della letteratura scientifica su Plinio il Vecchio e la sua opera nei diversi ambiti disciplinari. Non si tratta, tuttavia, di una mera lista di titoli, ma di uno strumento flessibile per esplorare lo sterminato mondo di Plinio e per condurre ricerche efficaci in quello che è un vero e proprio mare magnum. Ogni scheda contiene non solo i principali dati bibliografici (autore, titolo, ecc.), ma anche una breve descrizione del contenuto e, dove possibile, il link alla versione online e una lista delle recensioni (con eventuale link, se online). Inoltre, i tag individuano le parole chiave di ciascuna scheda.
DOI: 10.6084/m9.figshare.21500481
title: trickle down.sav

description: data for public
DOI: 10.6084/m9.figshare.21500481.v1
title: trickle down.sav

description: data for public
DOI: 10.6084/m9.figshare.21184477.v1
title: Supplementary Material for: A 2-Year, Single-Center Study to Assess the Safety and Effectiveness of the MicroShunt in Primary Open Angle Glaucoma

description: Aim: To assess the effectiveness and safety of the MicroShunt (formerly known as the MIDI-Arrow or InnFocus MicroShunt®), an 8.5-mm-long, 70-µm lumen controlled ab-externo glaucoma filtration surgery device made from poly(styrene-block-isobutylene-block-styrene) (SIBS), in patients with primary open-angle glaucoma (POAG). Methods: A 2-year, single-center, single-surgeon, non-randomized, adaptive feasibility clinical study (NCT01563237) was conducted in France from June 2011 to November 2016. Eligible patients were aged 18–85 years and had POAG inadequately controlled on maximum tolerated medical therapy with intraocular pressure (IOP) ≥18 and ≤40 mmHg. The MicroShunt was implanted ab externo with adjunctive use of Mitomycin C (0.2–0.4 mg/mL applied for 2–3 minutes), alone or in combination with cataract surgery. The primary effectiveness endpoints were the reduction in IOP relative to the preoperative value assessed at each postoperative visit and the measurement of success at years 1 and 2. The primary safety endpoint was the incidence of all procedure- and/or device-related adverse events (AEs) during the study. The secondary effectiveness endpoint was the mean number of glaucoma medications per patient, and the secondary safety endpoint was the incidence of glaucoma reoperation. Results: Sixty-one eyes from 61 patients underwent MicroShunt implantation. Mean IOP ± standard deviation (SD) was significantly reduced from 25.7 ± 6.1 mmHg at baseline (N = 61) to 15.8 ± 4.7 mmHg at year 1 (n = 58) and 16.5 ± 6.0 mmHg at year 2 (n = 52) (both p &lt; 0.001). Overall success rates for patients achieving IOP ≥6 mmHg and &lt;21 mmHg at year 1 and year 2 were 80.3% and 75.4%, respectively. Mean ± SD number of glaucoma medications per patient decreased significantly from 2.9 ± 1.1 at baseline to 0.6 ± 1.0 at year 1 (n = 58) and 1.0 ± 1.3 at year 2 (n = 52) (both p &lt; 0.001). The most common procedure- and/or device-related AEs were investigator-reported increased IOP and hyphema. Four patients required reoperation. Conclusions: In this study, sustained reductions in mean IOP and number of glaucoma medications from baseline were observed up to 2 years post surgery. No long-term, sight-threatening AEs were observed.
DOI: 10.6084/m9.figshare.21500337
title: Supplementary Material for: Clinical Features, Histological Characteristics, and Disease Outcomes of Mycosis Fungoides in Children and Adolescents: A Nationwide Multicentre Cohort of 46 Patients

description: <b><i>Background:</i></b> Our objective was to describe the clinical, histological characteristics, and disease outcome of a cohort of mycosis fungoides (MF) diagnosed during childhood including disease status at adulthood. <b><i>Methods:</i></b> This is a retrospective multicentre survey of patients aged under 18 years at diagnosis with histologically confirmed MF. Patients’ clinical and histological characteristics, treatments, and disease outcome (for patients followed for more than 12 months) were analysed. <b><i>Results:</i></b> Forty-six patients were included (median age at diagnosis: 11 years; M:F sex ratio: 3:1) with 39 (85%) followed for at least 12 months. Thirty-nine patients (85%) had stage I MF. Hypopigmented patches were observed in 48% and folliculotropism in 43% patients. Immunophenotype of the skin infiltrate was predominantly CD8+ in 17% of patients. Initial management included a wait-and-see strategy in 6/39 (15%), skin-directed treatment in 27 (69%), and systemic treatment in 6 (15%) patients, respectively, with partial or complete clinical response (PR or CR) observed in 28 patients (72%). 14/39 patients (36%) relapsed after initial response. After a median follow-up period of 54 months, disease status at last news was PR or CR in 31/39 (79%), stable disease in 6 (15%), and progression in 2 (5%) patients. Histological transformation was observed in 3/39 (8%). Of the 15 patients followed until adulthood, 13 (87%) had persistent MF. <b><i>Discussion:</i></b> This survey confirms the high frequency of hypopigmented and folliculotropic lesions and of CD8+ immunophenotype compared to adult MF patients. The long-term course is usually indolent but transformation may occur sometimes long after disease onset and the disease may persist during adulthood.
DOI: 10.6084/m9.figshare.21500554
title: Additional file 2 of QSRR modeling of the chromatographic retention behavior of some quinolone and sulfonamide antibacterial agents using firefly algorithm coupled to support vector machine

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.21500554.v1
title: Additional file 2 of QSRR modeling of the chromatographic retention behavior of some quinolone and sulfonamide antibacterial agents using firefly algorithm coupled to support vector machine

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.21500557.v1
title: Additional file 3 of QSRR modeling of the chromatographic retention behavior of some quinolone and sulfonamide antibacterial agents using firefly algorithm coupled to support vector machine

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.21500557
title: Additional file 3 of QSRR modeling of the chromatographic retention behavior of some quinolone and sulfonamide antibacterial agents using firefly algorithm coupled to support vector machine

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.21500635
title: Additional file 3 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 3: Differentially expressed genes of Venturia inaequalis during infection of susceptible apple cultivar ‘Royal Gala’, when compared to growth of the fungus in culture on the surface of cellophane membranes overlying potato dextrose agar.
DOI: 10.6084/m9.figshare.21500635.v1
title: Additional file 3 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 3: Differentially expressed genes of Venturia inaequalis during infection of susceptible apple cultivar ‘Royal Gala’, when compared to growth of the fungus in culture on the surface of cellophane membranes overlying potato dextrose agar.
DOI: 10.6084/m9.figshare.21500638
title: Additional file 4 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 4: List of Pfam domains in proteins encoded by genes of the five distinct temporal expression waves of Venturia inaequalis that are upregulated during colonization of susceptible apple cultivar ‘Royal Gala’, when compared to growth of the fungus in culture on the surface of cellophane membranes overlying potato dextrose agar.
DOI: 10.6084/m9.figshare.21500638.v1
title: Additional file 4 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 4: List of Pfam domains in proteins encoded by genes of the five distinct temporal expression waves of Venturia inaequalis that are upregulated during colonization of susceptible apple cultivar ‘Royal Gala’, when compared to growth of the fungus in culture on the surface of cellophane membranes overlying potato dextrose agar.
DOI: 10.6084/m9.figshare.21500641
title: Additional file 5 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 5: List of effector candidates (ECs) identified from Venturia inaequalis, their family classification, and indication of whether EC family members cluster in the genome.
DOI: 10.6084/m9.figshare.21500641.v1
title: Additional file 5 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 5: List of effector candidates (ECs) identified from Venturia inaequalis, their family classification, and indication of whether EC family members cluster in the genome.
DOI: 10.6084/m9.figshare.21500644
title: Additional file 6 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 6: List of protein tertiary structures from Venturia inaequalis with a confident AlphaFold2 prediction and list of predicted SCOPe folds.
DOI: 10.6084/m9.figshare.21500644.v1
title: Additional file 6 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 6: List of protein tertiary structures from Venturia inaequalis with a confident AlphaFold2 prediction and list of predicted SCOPe folds.
DOI: 10.6084/m9.figshare.21500647
title: Additional file 7 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 7: Matrix amino acid identity of the effector candidate (EC) structural families (MAX, ToxA, LARS, FOLD).
DOI: 10.6084/m9.figshare.21500647.v1
title: Additional file 7 of The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi

description: Additional file 7: Matrix amino acid identity of the effector candidate (EC) structural families (MAX, ToxA, LARS, FOLD).