cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/118640
title: Radiometer data collected during research cruise AT29-04 using a Eppley PSP instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698740
title: Additional file 8: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S8. Primers and genes used for qRT-PCR. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7698737
title: Additional file 7: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S7. List of differentially expressed carbohydrate-active enzymes (CAZyme) family genes. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.7698734
title: Additional file 6: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S6. List of browning-related genes and their respective biological functions. (XLSX 42 kb)
DOI: 10.6084/m9.figshare.7698737.v1
title: Additional file 7: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S7. List of differentially expressed carbohydrate-active enzymes (CAZyme) family genes. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.7698740.v1
title: Additional file 8: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S8. Primers and genes used for qRT-PCR. (XLSX 11 kb)
DOI: 10.7284/118646
title: Singlebeam Echosounder data collected during research cruise AT29-04 using a Knudsen 320B/R instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698728
title: Additional file 5: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S5. List of gene sets enriched in each cluste.r (XLSX 26 kb)
DOI: 10.6084/m9.figshare.7698734.v1
title: Additional file 6: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S6. List of browning-related genes and their respective biological functions. (XLSX 42 kb)
DOI: 10.6084/m9.figshare.7698722
title: Additional file 4: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S4. List of gene sets enriched in the differentially expressed genes. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7698728.v1
title: Additional file 5: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S5. List of gene sets enriched in each cluste.r (XLSX 26 kb)
DOI: 10.7284/118793
title: Multiplexed data collected during research cruise AT30-01 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698722.v1
title: Additional file 4: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S4. List of gene sets enriched in the differentially expressed genes. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7698716
title: Additional file 3: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S3. List of the differentially expressed genes used for clustering analysis in each group. (XLSX 776 kb)
DOI: 10.7284/118786
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT30-01 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698710
title: Additional file 2: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S2. Summary of the transcriptome annotation and gene expression data. (XLSX 4025 kb)
DOI: 10.6084/m9.figshare.7698701
title: Additional file 1: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S1. Summary of the sequencing data utilized in this study. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7698710.v1
title: Additional file 2: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S2. Summary of the transcriptome annotation and gene expression data. (XLSX 4025 kb)
DOI: 10.6084/m9.figshare.7698716.v1
title: Additional file 3: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S3. List of the differentially expressed genes used for clustering analysis in each group. (XLSX 776 kb)
DOI: 10.7284/118787
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise AT30-01 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698701.v1
title: Additional file 1: of Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes

description: Table S1. Summary of the sequencing data utilized in this study. (XLSX 10 kb)
DOI: 10.7284/118785
title: Fluorometer data collected during research cruise AT30-01 using a WET Labs WETStar instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118784
title: GNSS (Global Navigation Satellite System) data collected during research cruise AT30-01 using a C&C C-Nav 2050G instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118789
title: Meteorological Station data collected during research cruise AT30-01 using a Vaisala WXT520 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118790
title: Meteorological Station data collected during research cruise AT30-01 using a Vaisala WXT520 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698644
title: Additional file 1: of Uncovering a multitude of human glucocorticoid receptor variants: an expansive survey of a single gene

description: Table S1. PCR primer sequences for hGR screening. (XLSX 13 kb)
DOI: 10.7284/118788
title: Multibeam Echosounder data collected during research cruise AT30-01 using a Kongsberg EM122 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698644.v1
title: Additional file 1: of Uncovering a multitude of human glucocorticoid receptor variants: an expansive survey of a single gene

description: Table S1. PCR primer sequences for hGR screening. (XLSX 13 kb)
DOI: 10.7284/118791
title: Radiometer data collected during research cruise AT30-01 using a Eppley PIR instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118792
title: Radiometer data collected during research cruise AT30-01 using a Eppley PSP instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118803
title: Multiplexed data collected during research cruise AT30-02 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118796
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT30-02 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118797
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise AT30-02 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118795
title: Fluorometer data collected during research cruise AT30-02 using a WET Labs WETStar instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118794
title: GNSS (Global Navigation Satellite System) data collected during research cruise AT30-02 using a C&C C-Nav 2050G instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118799
title: Meteorological Station data collected during research cruise AT30-02 using a Vaisala WXT520 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118800
title: Meteorological Station data collected during research cruise AT30-02 using a Vaisala WXT520 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118798
title: Multibeam Echosounder data collected during research cruise AT30-02 using a Kongsberg EM122 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/118801
title: Radiometer data collected during research cruise AT30-02 using a Eppley PIR instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698518
title: Additional file 2: of Determination of circuit-specific morphological adaptations in ventral tegmental area dopamine neurons by chronic morphine

description: Table S2. Soma size data of all individual cells used in studies. (XLSX 63 kb)
DOI: 10.7284/118802
title: Radiometer data collected during research cruise AT30-02 using a Eppley PSP instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698518.v1
title: Additional file 2: of Determination of circuit-specific morphological adaptations in ventral tegmental area dopamine neurons by chronic morphine

description: Table S2. Soma size data of all individual cells used in studies. (XLSX 63 kb)
DOI: 10.7284/118812
title: Multiplexed data collected during research cruise AT30-03 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698281
title: Foraging ergonomic data of Bombus huntii

description: Foraging ergonomic data for <i>Bombus huntii</i> (Hymenoptera: Apidae, <i>Bombus</i>). The descriptions of each column are as follows: colony = colony origin identification number, date = date, day = day, month = month, year = year, julian.day = julian day, tag = unique identifier on foraging worker, start = start time of event (offloading and foraging), end = end time of event (offloading and foraging), time.diff = time elapsed of event, time.diff.edit = time elapsed of event modified for analysis, pollen = 0 is pollen observed and 1 is pollen not observed, out1_in0 = 1 is a foraging event and 0 is a offloading event, data.quality = 1 is high quality and 0 is low quality. For the data.quality column, 1 means that both a start and end time were observed for the offloading/foraging event.
DOI: 10.7284/118806
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT30-03 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698281.v1
title: Foraging ergonomic data of Bombus huntii

description: Foraging ergonomic data for <i>Bombus huntii</i> (Hymenoptera: Apidae, <i>Bombus</i>). The descriptions of each column are as follows: colony = colony origin identification number, date = date, day = day, month = month, year = year, julian.day = julian day, tag = unique identifier on foraging worker, start = start time of event (offloading and foraging), end = end time of event (offloading and foraging), time.diff = time elapsed of event, time.diff.edit = time elapsed of event modified for analysis, pollen = 0 is pollen observed and 1 is pollen not observed, out1_in0 = 1 is a foraging event and 0 is a offloading event, data.quality = 1 is high quality and 0 is low quality. For the data.quality column, 1 means that both a start and end time were observed for the offloading/foraging event.
DOI: 10.6084/m9.figshare.7698254
title: adh1wee1 Cells 26-39

description: Fission yeast growth videos. adh1:wee1-ts expressing cells growing in rich medium (YES) at 25˚C.
DOI: 10.7284/118805
title: Fluorometer data collected during research cruise AT30-03 using a WET Labs WETStar instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698254.v1
title: adh1wee1 Cells 26-39

description: Fission yeast growth videos. adh1:wee1-ts expressing cells growing in rich medium (YES) at 25˚C.
DOI: 10.6084/m9.figshare.7698236
title: Wild-Type Cells 1-12

description: Fission yeast growth videos. Wild-type cells growing in rich medium (YES) at 30˚C.<br>
DOI: 10.6084/m9.figshare.7698239
title: Table 4 Melanoma-to-organ ratios of 111In-labeled 3-arm and 4-arm DOTA-alpa-MSH in B16-F1-bearing mice

description: Melanoma-to-organ ratios of <sup>111</sup>In-labeled 3-arm and 4-arm DOTA-a-MSH in B16-F1-bearing mice
DOI: 10.6084/m9.figshare.7698251
title: ZEVwee1 Cells 13-21

description: Fission yeast growth videos. ZEV:wee1 expressing cells growing in rich medium (YES) at 30˚C.
DOI: 10.7284/118804
title: GNSS (Global Navigation Satellite System) data collected during research cruise AT30-03 using a C&C C-Nav 2050G instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698251.v1
title: ZEVwee1 Cells 13-21

description: Fission yeast growth videos. ZEV:wee1 expressing cells growing in rich medium (YES) at 30˚C.
DOI: 10.6084/m9.figshare.7698227
title: Table 2 Biological distribution of 111In-labeled 3-arm DOTA-alpha-MSH

description: Biological distribution of <sup>111</sup>In-labeled 3-arm DOTA-alpha-MSH
DOI: 10.6084/m9.figshare.7698230
title: Table 3 Biological distribution of 111In-labeled 4-arm DOTA-alpha-MSH

description: Biological distribution of <sup>111</sup>In-labeled 4-arm DOTA-a-MSH
DOI: 10.7284/118808
title: Meteorological Station data collected during research cruise AT30-03 using a Vaisala WXT520 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698224
title: CCDB_1021.jpg

description: Optical section series through a protoplasmic astrocyte in rat hippocampal area CA1 intracellulaly injected Lucifer Yellow and imaged with confocal microscopy
DOI: 10.7284/118809
title: Meteorological Station data collected during research cruise AT30-03 using a Vaisala WXT520 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698227.v2
title: Table 2 Biological distribution of 111In-labeled 3-arm DOTA-alpha-MSH

description: Biological distribution of <sup>111</sup>In-labeled 3-arm DOTA-alpha-MSH
DOI: 10.6084/m9.figshare.7698230.v2
title: Table 3 Biological distribution of 111In-labeled 4-arm DOTA-alpha-MSH

description: Biological distribution of <sup>111</sup>In-labeled 4-arm DOTA-a-MSH
DOI: 10.6084/m9.figshare.7698239.v3
title: Table 4 Melanoma-to-organ ratios of 111In-labeled 3-arm and 4-arm DOTA-alpa-MSH in B16-F1-bearing mice

description: Melanoma-to-organ ratios of <sup>111</sup>In-labeled 3-arm and 4-arm DOTA-a-MSH in B16-F1-bearing mice
DOI: 10.6084/m9.figshare.7698224.v1
title: CCDB_1021.jpg

description: Optical section series through a protoplasmic astrocyte in rat hippocampal area CA1 intracellulaly injected Lucifer Yellow and imaged with confocal microscopy
DOI: 10.6084/m9.figshare.7698230.v1
title: Table 3 Biological distribution of 111In-labeled 4-arm DOTA--MSH

description: Biological distribution of <sup>111</sup>In-labeled 4-arm DOTA-a-MSH
DOI: 10.6084/m9.figshare.7698239.v2
title: Melanoma-to-organ ratios of 111In-labeled 3-arm and 4-arm DOTA-alpa-MSH in B16-F1-bearing mice

description: Melanoma-to-organ ratios of <sup>111</sup>In-labeled 3-arm and 4-arm DOTA-a-MSH in B16-F1-bearing mice
DOI: 10.6084/m9.figshare.7698215
title: Table 1 Stability analysis of 111In-labeled 3-arm and 4-arm DOTA-alpha-MSH in plasma, liver, and kidney of mice by ex vivo

description: Stability analysis of <sup>111</sup>In-labeled 3-arm and 4-arm DOTA-alpha-MSH in plasma, liver, and kidney of mice by ex vivo
DOI: 10.7284/118807
title: Multibeam Echosounder data collected during research cruise AT30-03 using a Kongsberg EM122 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698218
title: CCDB_1019.jpg

description: Optical section series through a protoplasmic astrocyte in rat hippocampal area CA1 intracellulaly injected Lucifer Yellow and imaged with confocal microscopy
DOI: 10.6084/m9.figshare.7698221
title: CCDB_1020.jpg

description: Optical section series through a protoplasmic astrocyte in rat hippocampal area CA1 intracellulaly injected Lucifer Yellow and imaged with confocal microscopy
DOI: 10.6084/m9.figshare.7698218.v1
title: CCDB_1019.jpg

description: Optical section series through a protoplasmic astrocyte in rat hippocampal area CA1 intracellulaly injected Lucifer Yellow and imaged with confocal microscopy
DOI: 10.6084/m9.figshare.7698221.v1
title: CCDB_1020.jpg

description: Optical section series through a protoplasmic astrocyte in rat hippocampal area CA1 intracellulaly injected Lucifer Yellow and imaged with confocal microscopy
DOI: 10.7284/118810
title: Radiometer data collected during research cruise AT30-03 using a Eppley PIR instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698083
title: Study of the possible relationships between tramway front-end geometry and pedestrian injury risk

description: <b>Objectives:</b> The aim of this article is to report on the possible relationships between tramway front-end geometry and pedestrian injury risk over a wide range of possible tramway shapes. <b>Methods:</b> To study the effect of tramway front-end shape on pedestrian injury metrics, accidents were simulated using a custom parameterized model of tramway front-end and pedestrian models available with the MADYMO multibody solver. The approach was automated, allowing the systematic exploration of tramway shapes in conjunction with 4 pedestrian sizes (e.g., 50th percentile male or M50). <b>Results:</b> A total of 8,840 simulations were run, showing that the injury risk is more important for the head than for other body regions (thorax and lower extremities). The head of the M50 impacted the windshield of the tramway in most of the configurations. Two antagonist mechanisms affecting impact velocity of the head and corresponding head injury criterion (HIC) values were observed. The first is a trunk rotation resulting from an engagement of the lower body that can contribute to an increase in head velocity in the direction of the tram. The second is the loading of the shoulder, which can accelerate the upper trunk and head away from the windshield, resulting in lower impact velocities. Groups of design were defined based on 2 main parameters (windshield height and offset), some of which seem more beneficial than others for tramway design. The pedestrian size and tramway velocity (30 vs. 20 km/h) also affected the results. <b>Conclusions:</b> When considering only the front-end shape, the best strategy to limit the risk of head injury due to contact with the stiff windshield seems to be to promote the mechanism involving shoulder loading. Because body regions engaged vary with the pedestrian size, none of the groups of designs performed equally well for all pedestrian sizes. The best compromise is achieved with a combination of a large windscreen offset and a high windscreen. Conversely, particularly unfavorable configurations are observed for low windshield heights, especially with a large offset. Beyond the front-end shape, considering the stiffness of the current windshields and the high injury risks predicted for 30 km/h, the stiffness of the windshield should be considered in the future for further gains in pedestrian safety.
DOI: 10.7284/118811
title: Radiometer data collected during research cruise AT30-03 using a Eppley PSP instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7698215.v2
title: Table 1

description: Stability analysis of <sup>111</sup>In-labeled 3-arm and 4-arm DOTA-a-MSH in plasma, liver, and kidney of mice by ex vivo
DOI: 10.6084/m9.figshare.7698083.v1
title: Study of the possible relationships between tramway front-end geometry and pedestrian injury risk

description: <b>Objectives:</b> The aim of this article is to report on the possible relationships between tramway front-end geometry and pedestrian injury risk over a wide range of possible tramway shapes. <b>Methods:</b> To study the effect of tramway front-end shape on pedestrian injury metrics, accidents were simulated using a custom parameterized model of tramway front-end and pedestrian models available with the MADYMO multibody solver. The approach was automated, allowing the systematic exploration of tramway shapes in conjunction with 4 pedestrian sizes (e.g., 50th percentile male or M50). <b>Results:</b> A total of 8,840 simulations were run, showing that the injury risk is more important for the head than for other body regions (thorax and lower extremities). The head of the M50 impacted the windshield of the tramway in most of the configurations. Two antagonist mechanisms affecting impact velocity of the head and corresponding head injury criterion (HIC) values were observed. The first is a trunk rotation resulting from an engagement of the lower body that can contribute to an increase in head velocity in the direction of the tram. The second is the loading of the shoulder, which can accelerate the upper trunk and head away from the windshield, resulting in lower impact velocities. Groups of design were defined based on 2 main parameters (windshield height and offset), some of which seem more beneficial than others for tramway design. The pedestrian size and tramway velocity (30 vs. 20 km/h) also affected the results. <b>Conclusions:</b> When considering only the front-end shape, the best strategy to limit the risk of head injury due to contact with the stiff windshield seems to be to promote the mechanism involving shoulder loading. Because body regions engaged vary with the pedestrian size, none of the groups of designs performed equally well for all pedestrian sizes. The best compromise is achieved with a combination of a large windscreen offset and a high windscreen. Conversely, particularly unfavorable configurations are observed for low windshield heights, especially with a large offset. Beyond the front-end shape, considering the stiffness of the current windshields and the high injury risks predicted for 30 km/h, the stiffness of the windshield should be considered in the future for further gains in pedestrian safety.