cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7843232.v1
title: Additional file 3: of Elymus nutans genes for seed shattering and candidate gene-derived EST-SSR markers for germplasm evaluation

description: Table S2. Differentially expressed transcripts related to seed shattering found in abscission zone and non-abscission zone. (XLS 357 kb)
DOI: 10.6084/m9.figshare.7843220
title: Additional file 1: of Elymus nutans genes for seed shattering and candidate gene-derived EST-SSR markers for germplasm evaluation

description: Table S1. Significantly enriched Go terms found in differentially expressed transcript sets of two Elymus species. (XLS 33 kb)
DOI: 10.6084/m9.figshare.7843220.v1
title: Additional file 1: of Elymus nutans genes for seed shattering and candidate gene-derived EST-SSR markers for germplasm evaluation

description: Table S1. Significantly enriched Go terms found in differentially expressed transcript sets of two Elymus species. (XLS 33 kb)
DOI: 10.6084/m9.figshare.7843217
title: Additional file 9: of An alarmingly high nasal carriage rate of Streptococcus pneumoniae serotype 19F non-susceptible to multiple beta-lactam antimicrobials among Vietnamese children

description: Data set used for analysis. (XLSX 98 kb)
DOI: 10.6084/m9.figshare.7843217.v1
title: Additional file 9: of An alarmingly high nasal carriage rate of Streptococcus pneumoniae serotype 19F non-susceptible to multiple beta-lactam antimicrobials among Vietnamese children

description: Data set used for analysis. (XLSX 98 kb)
DOI: 10.6084/m9.figshare.7843160
title: Additional file 1: of Expression and regulatory asymmetry of retained Arabidopsis thaliana transcription factor genes derived from whole genome duplication

description: Table S1. Lists of Arabidopsis thaliana genes in each GO category. Table S2. Variables considered for linear modeling and their sources. Table S3. Parameter Estimation for α WGD Retention Models. Table S4. Parameter Estimation for β WGD Retention Models. Table S5. Parameter Estimation for γ WGD Retention Models. Table S6. Number of experiments, samples, and inferred states from each expression data set. Table S7. Proportion of duplicate pairs with an expression state for each whole-genome duplication event and expression data set. Table S8. Average asymmetry of duplicate pairs across data sets. Table S9. List of experiments in each ATGenExpress dataset. Table S10. List of RNA-Seq Data Sets. Table S11. List of TFs in each Pfam domain family. Table S12. Initial conditions and inferred parameters for ODE models (XLSX 118 kb)
DOI: 10.6084/m9.figshare.7843160.v1
title: Additional file 1: of Expression and regulatory asymmetry of retained Arabidopsis thaliana transcription factor genes derived from whole genome duplication

description: Table S1. Lists of Arabidopsis thaliana genes in each GO category. Table S2. Variables considered for linear modeling and their sources. Table S3. Parameter Estimation for α WGD Retention Models. Table S4. Parameter Estimation for β WGD Retention Models. Table S5. Parameter Estimation for γ WGD Retention Models. Table S6. Number of experiments, samples, and inferred states from each expression data set. Table S7. Proportion of duplicate pairs with an expression state for each whole-genome duplication event and expression data set. Table S8. Average asymmetry of duplicate pairs across data sets. Table S9. List of experiments in each ATGenExpress dataset. Table S10. List of RNA-Seq Data Sets. Table S11. List of TFs in each Pfam domain family. Table S12. Initial conditions and inferred parameters for ODE models (XLSX 118 kb)
DOI: 10.6084/m9.figshare.7843109
title: Additional file 1: of Perceived health effects of vaping among Hungarian adult e-cigarette-only and dual users: a cross-sectional internet survey

description: Survey questionnaire. An English language translation of the survey used to study the perceived health effects of vaping among Hungarian adult e-cigarette-only and dual users. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.7843112
title: Additional file 1: of A multi-parent recombinant inbred line population of C. elegans allows identification of novel QTLs for complex life history traits

description: Table S1. Detailed crossing scheme used to make the mpRILs. The crosses from which each individual mpRIL was made can be found here. Table S2. SNP info. SNP position and SNP distribution pattern (SDP). Table S3. SNP genetic map. SNP identity per mpRIL. Table S4. Parental background genetic map. Genome-wide parental background for each individual mpRIL. Table S5. Average phenotypes per mpRIL used for QTL mapping. Including WN and sequence identifiers. Table S6. Trait descriptive. Number of mpRILs for which the phenotype was measured, minimum trait value, maximum trait value, mean trait value, median trait value, trait value of parental line JU1511, trait value of parental line JU1926, trait value of parental line JU1931, trait value of parental line JU1941, heritability, heritability type, number of QTLs found, and explained variation by QTLs. Table S7. Correlation between traits. Pearson correlation of the mean traits values in the mpRIL population. Table S8. Identified QTLs. (XLSX 11929 kb)
DOI: 10.6084/m9.figshare.7843109.v1
title: Additional file 1: of Perceived health effects of vaping among Hungarian adult e-cigarette-only and dual users: a cross-sectional internet survey

description: Survey questionnaire. An English language translation of the survey used to study the perceived health effects of vaping among Hungarian adult e-cigarette-only and dual users. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.7843112.v1
title: Additional file 1: of A multi-parent recombinant inbred line population of C. elegans allows identification of novel QTLs for complex life history traits

description: Table S1. Detailed crossing scheme used to make the mpRILs. The crosses from which each individual mpRIL was made can be found here. Table S2. SNP info. SNP position and SNP distribution pattern (SDP). Table S3. SNP genetic map. SNP identity per mpRIL. Table S4. Parental background genetic map. Genome-wide parental background for each individual mpRIL. Table S5. Average phenotypes per mpRIL used for QTL mapping. Including WN and sequence identifiers. Table S6. Trait descriptive. Number of mpRILs for which the phenotype was measured, minimum trait value, maximum trait value, mean trait value, median trait value, trait value of parental line JU1511, trait value of parental line JU1926, trait value of parental line JU1931, trait value of parental line JU1941, heritability, heritability type, number of QTLs found, and explained variation by QTLs. Table S7. Correlation between traits. Pearson correlation of the mean traits values in the mpRIL population. Table S8. Identified QTLs. (XLSX 11929 kb)
DOI: 10.6084/m9.figshare.7843082
title: Additional file 1: of Identification and antimicrobial susceptibility profile of Escherichia coli isolated from backyard chicken in and around ambo, Central Ethiopia

description: Data for Chicken, E.coli 2017. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.7843082.v1
title: Additional file 1: of Identification and antimicrobial susceptibility profile of Escherichia coli isolated from backyard chicken in and around ambo, Central Ethiopia

description: Data for Chicken, E.coli 2017. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.7842995
title: Additional file 5: of Interspecific delimitation and relationships among four Ostrya species based on plastomes

description: : Table S5. Repeats distribution in Ostrya chloroplast genome. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.7842995.v1
title: Additional file 5: of Interspecific delimitation and relationships among four Ostrya species based on plastomes

description: : Table S5. Repeats distribution in Ostrya chloroplast genome. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.7842920
title: Additional file 9: of A large close relative of C. elegans is slow-developing but not long-lived

description: Reproductive_duration_data.tsv. Reproductive duration data. (TSV 15 kb)
DOI: 10.6084/m9.figshare.7842920.v1
title: Additional file 9: of A large close relative of C. elegans is slow-developing but not long-lived

description: Reproductive_duration_data.tsv. Reproductive duration data. (TSV 15 kb)
DOI: 10.6084/m9.figshare.7842905
title: Additional file 7: of A large close relative of C. elegans is slow-developing but not long-lived

description: Lifespan_data.tsv. Lifespan data. (TSV 42 kb)
DOI: 10.6084/m9.figshare.7842896
title: Additional file 6: of A large close relative of C. elegans is slow-developing but not long-lived

description: Postembryonic_milestone_time_data.tsv. Developmental timing data for postembryonic milestones. (TSV 37 kb)
DOI: 10.6084/m9.figshare.7842878
title: Additional file 4: of A large close relative of C. elegans is slow-developing but not long-lived

description: Models_hypothesis_tests.R. Software for generating models and statistics. (R 52 kb)
DOI: 10.6084/m9.figshare.7842887
title: Additional file 5: of A large close relative of C. elegans is slow-developing but not long-lived

description: Hatch_time_data.tsv. Developmental timing data for hatching. (TSV 7 kb)
DOI: 10.6084/m9.figshare.7842878.v1
title: Additional file 4: of A large close relative of C. elegans is slow-developing but not long-lived

description: Models_hypothesis_tests.R. Software for generating models and statistics. (R 52 kb)
DOI: 10.6084/m9.figshare.7842887.v1
title: Additional file 5: of A large close relative of C. elegans is slow-developing but not long-lived

description: Hatch_time_data.tsv. Developmental timing data for hatching. (TSV 7 kb)
DOI: 10.6084/m9.figshare.7842866
title: Additional file 2: of A large close relative of C. elegans is slow-developing but not long-lived

description: Fecundity_metadata.tsv. Fecundity metadata collected for Additional file 1: Figure S5-S6. (TSV 42 kb)
DOI: 10.6084/m9.figshare.7842869
title: Additional file 3: of A large close relative of C. elegans is slow-developing but not long-lived

description: Developmental_timing_metadata.tsv. Developmental timing metadata collected for Additional file 1: Figure S7-S8. (TSV 6 kb)
DOI: 10.6084/m9.figshare.7842866.v1
title: Additional file 2: of A large close relative of C. elegans is slow-developing but not long-lived

description: Fecundity_metadata.tsv. Fecundity metadata collected for Additional file 1: Figure S5-S6. (TSV 42 kb)
DOI: 10.6084/m9.figshare.7842869.v1
title: Additional file 3: of A large close relative of C. elegans is slow-developing but not long-lived

description: Developmental_timing_metadata.tsv. Developmental timing metadata collected for Additional file 1: Figure S7-S8. (TSV 6 kb)
DOI: 10.6084/m9.figshare.7842857
title: Additional file 16: of A large close relative of C. elegans is slow-developing but not long-lived

description: Upset_plot_input.tsv. Data for generating an UpSet plot as in Figure. (TSV 453 kb)
DOI: 10.6084/m9.figshare.7842848
title: Additional file 15: of A large close relative of C. elegans is slow-developing but not long-lived

description: Wormbase_phenotype_intersections.sh. Software for generating phenotype intersection UpSet plot data from a WormBase Simplemine tab-delimited file. (SH 6 kb)
DOI: 10.6084/m9.figshare.7842857.v1
title: Additional file 16: of A large close relative of C. elegans is slow-developing but not long-lived

description: Upset_plot_input.tsv. Data for generating an UpSet plot as in Figure. (TSV 453 kb)
DOI: 10.6084/m9.figshare.7842848.v1
title: Additional file 15: of A large close relative of C. elegans is slow-developing but not long-lived

description: Wormbase_phenotype_intersections.sh. Software for generating phenotype intersection UpSet plot data from a WormBase Simplemine tab-delimited file. (SH 6 kb)
DOI: 10.6084/m9.figshare.7842833
title: Additional file 14: of A large close relative of C. elegans is slow-developing but not long-lived

description: Wormbse_simplemine.txt. Data retrieved from WormBase for generating upset_plot_input.tsv (Additional file 16). (TXT 5290 kb)
DOI: 10.6084/m9.figshare.7842833.v1
title: Additional file 14: of A large close relative of C. elegans is slow-developing but not long-lived

description: Wormbse_simplemine.txt. Data retrieved from WormBase for generating upset_plot_input.tsv (Additional file 16). (TXT 5290 kb)
DOI: 10.6084/m9.figshare.7842824
title: Additional file 13: of A large close relative of C. elegans is slow-developing but not long-lived

description: Viability_data.tsv. Viability data. (TSV 1 kb)
DOI: 10.6084/m9.figshare.7842815
title: Additional file 12: of A large close relative of C. elegans is slow-developing but not long-lived

description: Life_tables.tsv. Data used for estimating the rate of population increase. (TSV 14 kb)
DOI: 10.6084/m9.figshare.7842815.v1
title: Additional file 12: of A large close relative of C. elegans is slow-developing but not long-lived

description: Life_tables.tsv. Data used for estimating the rate of population increase. (TSV 14 kb)
DOI: 10.6084/m9.figshare.7842800
title: Additional file 10: of A large close relative of C. elegans is slow-developing but not long-lived

description: Fecundity_lifetime_access_data.tsv. Fecundity with lifetime access to males data. (TSV 2 kb)
DOI: 10.6084/m9.figshare.7842806
title: Additional file 11: of A large close relative of C. elegans is slow-developing but not long-lived

description: Fecundity_overnight_mating_data.tsv. Fecundity with one overnight mating data. (TSV 2 kb)
DOI: 10.6084/m9.figshare.7842806.v1
title: Additional file 11: of A large close relative of C. elegans is slow-developing but not long-lived

description: Fecundity_overnight_mating_data.tsv. Fecundity with one overnight mating data. (TSV 2 kb)
DOI: 10.6084/m9.figshare.7842746
title: Additional file 5: of Comparative genomics of plant pathogenic Botrytis species with distinct host specificity

description: List of putative effector genes present in Botrytis spp. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.7842749
title: Additional file 6: of Comparative genomics of plant pathogenic Botrytis species with distinct host specificity

description: Summary of the presence/absence of all described secondary metabolites key enzymes of Botrytis cinerea in Botrytis spp. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7842746.v1
title: Additional file 5: of Comparative genomics of plant pathogenic Botrytis species with distinct host specificity

description: List of putative effector genes present in Botrytis spp. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.7842749.v1
title: Additional file 6: of Comparative genomics of plant pathogenic Botrytis species with distinct host specificity

description: Summary of the presence/absence of all described secondary metabolites key enzymes of Botrytis cinerea in Botrytis spp. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7842731
title: Additional file 9 of Bayesian modeling of plant drought resistance pathway

description: Excel file containing the data used from dataset GSE65046 to support the conclusion of this article.The complete dataset can be publicly accessed online from NCBI GEO database with the accession number of GSE65046. (XLSX 10.1 kb)
DOI: 10.6084/m9.figshare.7842725
title: Additional file 8 of Bayesian modeling of plant drought resistance pathway

description: Excel file containing the data used from dataset GSE46365 to support the conclusion of this article.The complete dataset can be publicly accessed online from NCBI GEO database with the accession number of GSE46365. (XLSX 9.89 kb)
DOI: 10.6084/m9.figshare.7842731.v1
title: Additional file 9 of Bayesian modeling of plant drought resistance pathway

description: Excel file containing the data used from dataset GSE65046 to support the conclusion of this article.The complete dataset can be publicly accessed online from NCBI GEO database with the accession number of GSE65046. (XLSX 10.1 kb)
DOI: 10.6084/m9.figshare.7842716
title: Additional file 7 of Bayesian modeling of plant drought resistance pathway

description: R code to generate synthetic data. (R 1 kb)
DOI: 10.6084/m9.figshare.7842722
title: Additional file 1: of Comparative genomics of plant pathogenic Botrytis species with distinct host specificity

description: Percentage differences between dinucleotides frequencies of AT-rich regions and GC-equilibrated regions. A positive number indicate a higher value in AT-rich regions and a negative number indicate a higher value in GC-equilibrated regions. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7842725.v1
title: Additional file 8 of Bayesian modeling of plant drought resistance pathway

description: Excel file containing the data used from dataset GSE46365 to support the conclusion of this article.The complete dataset can be publicly accessed online from NCBI GEO database with the accession number of GSE46365. (XLSX 9.89 kb)
DOI: 10.6084/m9.figshare.7842710
title: Additional file 6 of Bayesian modeling of plant drought resistance pathway

description: R code to binarize the data using mean or median. (R 1 kb)
DOI: 10.6084/m9.figshare.7842716.v1
title: Additional file 7 of Bayesian modeling of plant drought resistance pathway

description: R code to generate synthetic data. (R 1 kb)
DOI: 10.6084/m9.figshare.7842722.v1
title: Additional file 1: of Comparative genomics of plant pathogenic Botrytis species with distinct host specificity

description: Percentage differences between dinucleotides frequencies of AT-rich regions and GC-equilibrated regions. A positive number indicate a higher value in AT-rich regions and a negative number indicate a higher value in GC-equilibrated regions. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7842701
title: Additional file 5 of Bayesian modeling of plant drought resistance pathway

description: R code to calculate shape parameters of Beta distribution. (R 4.20 kb)
DOI: 10.6084/m9.figshare.7842710.v1
title: Additional file 6 of Bayesian modeling of plant drought resistance pathway

description: R code to binarize the data using mean or median. (R 1 kb)
DOI: 10.6084/m9.figshare.7842695
title: Additional file 4 of Bayesian modeling of plant drought resistance pathway

description: R code to normalize the data. (R 1 kb)
DOI: 10.6084/m9.figshare.7842689
title: Additional file 3 of Bayesian modeling of plant drought resistance pathway

description: R code for finding MLE. (R 1.06 kb)
DOI: 10.6084/m9.figshare.7842701.v1
title: Additional file 5 of Bayesian modeling of plant drought resistance pathway

description: R code to calculate shape parameters of Beta distribution. (R 4.20 kb)
DOI: 10.6084/m9.figshare.7842686
title: Additional file 2 of Bayesian modeling of plant drought resistance pathway

description: R code for plotting utilities. (R 1.12 kb)
DOI: 10.6084/m9.figshare.7842689.v1
title: Additional file 3 of Bayesian modeling of plant drought resistance pathway

description: R code for finding MLE. (R 1.06 kb)
DOI: 10.6084/m9.figshare.7842680
title: Additional file 1 of Bayesian modeling of plant drought resistance pathway

description: R code for generating synthetic data and estimating parameters. Also serves as the main execution file. (R 5.02 kb)
DOI: 10.6084/m9.figshare.7842683
title: Additional file 1: of A European interlaboratory trial to evaluate the performance of different PCR methods for Mycoplasma bovis diagnosis

description: Raw data to Figs. 1, 2 and 3 are provided in Additional file 1. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.7842686.v1
title: Additional file 2 of Bayesian modeling of plant drought resistance pathway

description: R code for plotting utilities. (R 1.12 kb)
DOI: 10.6084/m9.figshare.7842695.v1
title: Additional file 4 of Bayesian modeling of plant drought resistance pathway

description: R code to normalize the data. (R 1 kb)
DOI: 10.6084/m9.figshare.7842683.v1
title: Additional file 1: of A European interlaboratory trial to evaluate the performance of different PCR methods for Mycoplasma bovis diagnosis

description: Raw data to Figs. 1, 2 and 3 are provided in Additional file 1. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.7842674
title: Additional file 10 of Bayesian modeling of plant drought resistance pathway

description: Excel file containing the data used from dataset GSE76827 to support the conclusion of this article.The complete dataset can be publicly accessed online from NCBI GEO database with the accession number of GSE76827. (XLSX 9.03 kb)
DOI: 10.6084/m9.figshare.7842680.v1
title: Additional file 1 of Bayesian modeling of plant drought resistance pathway

description: R code for generating synthetic data and estimating parameters. Also serves as the main execution file. (R 5.02 kb)
DOI: 10.6084/m9.figshare.7842668
title: Additional file 3: of The impact of a combinatorial digital and organisational intervention on the management of long-term conditions in UK primary care: a non-randomised evaluation

description: Comparing HMR and Bury. Descriptive statistics of HMR and Bury CCGs. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7842674.v1
title: Additional file 10 of Bayesian modeling of plant drought resistance pathway

description: Excel file containing the data used from dataset GSE76827 to support the conclusion of this article.The complete dataset can be publicly accessed online from NCBI GEO database with the accession number of GSE76827. (XLSX 9.03 kb)
DOI: 10.6084/m9.figshare.7842656
title: Additional file 8: of Roadmap of DNA methylation in breast cancer identifies novel prognostic biomarkers

description: Table S7. Results of pan-cancer analyses of diagnostic and prognostic potential of the CpGs from PRAC2, TDRD10 and TMEM132C. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.7842668.v1
title: Additional file 3: of The impact of a combinatorial digital and organisational intervention on the management of long-term conditions in UK primary care: a non-randomised evaluation

description: Comparing HMR and Bury. Descriptive statistics of HMR and Bury CCGs. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7842650
title: Additional file 7: of Roadmap of DNA methylation in breast cancer identifies novel prognostic biomarkers

description: Table S6. Results of pan-cancer analyses of differential gene expression of PRAC2, TDRD10 and TMEM132C. (XLSX 35 kb)
DOI: 10.6084/m9.figshare.7842647
title: Additional file 3: of Prebiotic supplementation in frail older people affects specific gut microbiota taxa but not global diversity

description: Supplementary Tables S5–S8. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.7842656.v1
title: Additional file 8: of Roadmap of DNA methylation in breast cancer identifies novel prognostic biomarkers

description: Table S7. Results of pan-cancer analyses of diagnostic and prognostic potential of the CpGs from PRAC2, TDRD10 and TMEM132C. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.7842647.v1
title: Additional file 3: of Prebiotic supplementation in frail older people affects specific gut microbiota taxa but not global diversity

description: Supplementary Tables S5–S8. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.7842650.v1
title: Additional file 7: of Roadmap of DNA methylation in breast cancer identifies novel prognostic biomarkers

description: Table S6. Results of pan-cancer analyses of differential gene expression of PRAC2, TDRD10 and TMEM132C. (XLSX 35 kb)
DOI: 10.6084/m9.figshare.7842641
title: Additional file 5: of Roadmap of DNA methylation in breast cancer identifies novel prognostic biomarkers

description: Table S4. List of genes differently expressed between normal and tumor METABRIC samples and with concordant results with TCGA breast cancer analyses. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.7842644
title: Additional file 6: of Roadmap of DNA methylation in breast cancer identifies novel prognostic biomarkers

description: Table S5. Results of OncoScore analyses for the 164 differentially-methylated and differentially-expressed genes. (XLSX 35 kb)
DOI: 10.6084/m9.figshare.7842632
title: Additional file 4: of Roadmap of DNA methylation in breast cancer identifies novel prognostic biomarkers

description: Table S3. List of CpGs located in genes that are differentially expressed between breast cancer and matched-normal TCGA samples and whose methylation levels are correlated with cognate gene expression. (XLSX 61 kb)