cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6207686
title: EXPERIMENTAL AND THEORETICAL ANALYSIS OF NA OXAZINOQUINOXALINE DERIVATIVE FOR CORROSION INHIBITION OF AISI 1018 STEEL

description: The inhibitory ability of an oxazinoquinoxaline derivative (OAQX) against the corrosion of AISI 1018 mild steel induced by aqueous 0.6 mol L-1 NaCl solution is herein evaluated. Linear polarization resistance studies showed the inhibitory efficiency of OAQX varying from 62.75% to 75.93% with OAQX concentration ranged from 0.259 x 10-4 mol L-1 to 3.243 x 10-4 mol L-1. Aiming at to investigate the Tafel curves on the OAQX electrochemical behavior at saline (0.6 mol L-1 NaCl) aqueous media the linear Tafel segments of anodic and cathodic curves were extrapolated to the intersection point which afforded corrosion potential (Ecorr) and corrosion current density (icorr) data. By applying Tafel approach the efficiency of OAQX ranges from 55.30% to 87.60%. In both analysis Langmuir isotherm lead to optimized adsorption parameter. The adsorption mechanism of OAQX is proposed from FTIR experiments and quantum calculations. The theoretical employed method is hybrid B3LYP combined with 6-311++G(d,p). Theoretical results showed OAQX as a promising inhibitor that form a stable protective metal-ligand film on metal surfaces, and differs from several heterocyclic compounds due to its solubility in small amount of DMSO (0.627 x 10-4 mol L-1) which is resistant to a saline aqueous media (0.6 mol L-1 NaCl).
DOI: 10.6084/m9.figshare.6207686.v1
title: EXPERIMENTAL AND THEORETICAL ANALYSIS OF NA OXAZINOQUINOXALINE DERIVATIVE FOR CORROSION INHIBITION OF AISI 1018 STEEL

description: The inhibitory ability of an oxazinoquinoxaline derivative (OAQX) against the corrosion of AISI 1018 mild steel induced by aqueous 0.6 mol L-1 NaCl solution is herein evaluated. Linear polarization resistance studies showed the inhibitory efficiency of OAQX varying from 62.75% to 75.93% with OAQX concentration ranged from 0.259 x 10-4 mol L-1 to 3.243 x 10-4 mol L-1. Aiming at to investigate the Tafel curves on the OAQX electrochemical behavior at saline (0.6 mol L-1 NaCl) aqueous media the linear Tafel segments of anodic and cathodic curves were extrapolated to the intersection point which afforded corrosion potential (Ecorr) and corrosion current density (icorr) data. By applying Tafel approach the efficiency of OAQX ranges from 55.30% to 87.60%. In both analysis Langmuir isotherm lead to optimized adsorption parameter. The adsorption mechanism of OAQX is proposed from FTIR experiments and quantum calculations. The theoretical employed method is hybrid B3LYP combined with 6-311++G(d,p). Theoretical results showed OAQX as a promising inhibitor that form a stable protective metal-ligand film on metal surfaces, and differs from several heterocyclic compounds due to its solubility in small amount of DMSO (0.627 x 10-4 mol L-1) which is resistant to a saline aqueous media (0.6 mol L-1 NaCl).
DOI: 10.6084/m9.figshare.9962789.v1
title: MOESM11 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 11: Table S6. ROBO2 gene variants in different cohorts.
DOI: 10.6084/m9.figshare.13632773
title: Additional file 3 of A comprehensive microsatellite landscape of human Y-DNA at kilobase resolution

description: Additional file 3: Table S3. The features of identified SSR mini-clusters in 55 sequenced segments of human reference Y-DNA (NC_000024.10) (mini-cluster (MClu), 9 ≤ clustered same or similar SSR number &lt; 26).
DOI: 10.6084/m9.figshare.13632773.v1
title: Additional file 3 of A comprehensive microsatellite landscape of human Y-DNA at kilobase resolution

description: Additional file 3: Table S3. The features of identified SSR mini-clusters in 55 sequenced segments of human reference Y-DNA (NC_000024.10) (mini-cluster (MClu), 9 ≤ clustered same or similar SSR number &lt; 26).
DOI: 10.6084/m9.figshare.9962792
title: MOESM1 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 1: Table S1. The clinicopathologic features of patients with NSCLC on chemotherapy.
DOI: 10.6084/m9.figshare.9962792.v1
title: MOESM1 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 1: Table S1. The clinicopathologic features of patients with NSCLC on chemotherapy.
DOI: 10.6084/m9.figshare.9962795
title: MOESM10 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 10: Table S4. Reciprocal best Blastp hits results between Gymnosporangium spp. predicted proteomes. GYA, G. asiaticum; GYJ, G. japonicum; GYY, G. yamadae. (XLSX 627 kb)
DOI: 10.6084/m9.figshare.9962795.v1
title: MOESM10 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 10: Table S4. Reciprocal best Blastp hits results between Gymnosporangium spp. predicted proteomes. GYA, G. asiaticum; GYJ, G. japonicum; GYY, G. yamadae. (XLSX 627 kb)
DOI: 10.6084/m9.figshare.9962798
title: MOESM2 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 2: Table S2. The clinicopathological information and blood draw tme point for each patient.
DOI: 10.6084/m9.figshare.9962798.v1
title: MOESM2 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 2: Table S2. The clinicopathological information and blood draw tme point for each patient.
DOI: 10.6084/m9.figshare.9962801
title: MOESM11 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 11: Table S5. Secreted proteins predicted in G. japonicum, G. yamadae and G. asiaticum. CPL stands for CAZymes, proteases and lipases homology prediction; SP is for swissprot blastp homology search; perc C for the percentage of cysteine residues in the amino acid sequence and NLS stands for Nuclear Localisation Signal prediction. (XLSX 261 kb)
DOI: 10.6084/m9.figshare.9962801.v1
title: MOESM11 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 11: Table S5. Secreted proteins predicted in G. japonicum, G. yamadae and G. asiaticum. CPL stands for CAZymes, proteases and lipases homology prediction; SP is for swissprot blastp homology search; perc C for the percentage of cysteine residues in the amino acid sequence and NLS stands for Nuclear Localisation Signal prediction. (XLSX 261 kb)
DOI: 10.6084/m9.figshare.9962804
title: MOESM3 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 3: Table S3. Gene list for BGI Oseq-ctDNA.
DOI: 10.6084/m9.figshare.9962804.v1
title: MOESM3 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 3: Table S3. Gene list for BGI Oseq-ctDNA.
DOI: 10.6084/m9.figshare.16778543
title: Additional file 4 of Biotinylation of the Neospora caninum parasitophorous vacuole reveals novel dense granule proteins

description: Additional file 4: Table S2. Mass spectrometry results for the identification of proteins from NcGRA17-BirA* based biotinylation.
DOI: 10.6084/m9.figshare.16778543.v1
title: Additional file 4 of Biotinylation of the Neospora caninum parasitophorous vacuole reveals novel dense granule proteins

description: Additional file 4: Table S2. Mass spectrometry results for the identification of proteins from NcGRA17-BirA* based biotinylation.
DOI: 10.6084/m9.figshare.16778546
title: Additional file 5 of Biotinylation of the Neospora caninum parasitophorous vacuole reveals novel dense granule proteins

description: Additional file 5: Table S3. Human protein hits from NcGRA17-BioID mass spectrometry.
DOI: 10.6084/m9.figshare.7865645
title: Increased expression levels of Syntaxin 1A and Synaptobrevin 2/Vesicle-Associated Membrane Protein-2 are associated with the progression of bladder cancer

description: Abstract Gene expression is tightly regulated in time and space through a multitude of factors consisting of signaling molecules. Soluble N-ethylmaleimide-sensitive-factor attachment protein receptors (SNARE) are membrane proteins responsible for the intercellular trafficking of signals through endocytosis and exocytosis of vesicles. Altered expression of SNARE proteins in cellular communication is the major hallmark of cancer phenotypes as indicated in recent studies. SNAREs play an important role in maintaining cell growth and epithelial membrane permeability of the bladder and are not only involved in cancer progression but also metastatic cell invasion through SNARE-mediated trafficking. Synaptobrevin2/Vesicle associated membrane protein-2 (v-SNARE) and Syntaxin (t-SNARE) form a vesicular docking complex during endocytosis. Some earlier studies have shown a critical role of SNARE in colon, lungs, and breast cancer progression and metastasis. In this study, we analyzed the relative expression of the STX1A and VAMP2 (SYB2) for their possible association in the progression and metastasis of bladder cancer. The profiling of the genes showed a significant increase in STX1A and VAMP2 expression (p &lt; 0.001) in high-grade tumor cells compared to normal and low-grade tumors. These findings suggest that elevated expression of STX1A and VAMP2 might have caused the abnormal progression and invasion of cancer cells leading to the transformation of cells into high-grade tumor in bladder cancer.
DOI: 10.6084/m9.figshare.7865645.v1
title: Increased expression levels of Syntaxin 1A and Synaptobrevin 2/Vesicle-Associated Membrane Protein-2 are associated with the progression of bladder cancer

description: Abstract Gene expression is tightly regulated in time and space through a multitude of factors consisting of signaling molecules. Soluble N-ethylmaleimide-sensitive-factor attachment protein receptors (SNARE) are membrane proteins responsible for the intercellular trafficking of signals through endocytosis and exocytosis of vesicles. Altered expression of SNARE proteins in cellular communication is the major hallmark of cancer phenotypes as indicated in recent studies. SNAREs play an important role in maintaining cell growth and epithelial membrane permeability of the bladder and are not only involved in cancer progression but also metastatic cell invasion through SNARE-mediated trafficking. Synaptobrevin2/Vesicle associated membrane protein-2 (v-SNARE) and Syntaxin (t-SNARE) form a vesicular docking complex during endocytosis. Some earlier studies have shown a critical role of SNARE in colon, lungs, and breast cancer progression and metastasis. In this study, we analyzed the relative expression of the STX1A and VAMP2 (SYB2) for their possible association in the progression and metastasis of bladder cancer. The profiling of the genes showed a significant increase in STX1A and VAMP2 expression (p &lt; 0.001) in high-grade tumor cells compared to normal and low-grade tumors. These findings suggest that elevated expression of STX1A and VAMP2 might have caused the abnormal progression and invasion of cancer cells leading to the transformation of cells into high-grade tumor in bladder cancer.
DOI: 10.6084/m9.figshare.16778546.v1
title: Additional file 5 of Biotinylation of the Neospora caninum parasitophorous vacuole reveals novel dense granule proteins

description: Additional file 5: Table S3. Human protein hits from NcGRA17-BioID mass spectrometry.
DOI: 10.6084/m9.figshare.9962807
title: MOESM12 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 12: Table S6. Gymnosporangium spp. specific clusters identified by Markov Cluster Algorithm (MCL). Cluster IDs are provided and secretion prediction is indicated. Gymas/GYA, G. asiaticum; Gymja/GYJ, G. japonicum; Gymya/GYY, G. yamadae. (XLSX 276 kb)
DOI: 10.6084/m9.figshare.9962807.v1
title: MOESM12 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 12: Table S6. Gymnosporangium spp. specific clusters identified by Markov Cluster Algorithm (MCL). Cluster IDs are provided and secretion prediction is indicated. Gymas/GYA, G. asiaticum; Gymja/GYJ, G. japonicum; Gymya/GYY, G. yamadae. (XLSX 276 kb)
DOI: 10.6084/m9.figshare.9962813
title: MOESM13 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 13: Table S7. Clusters of secreted proteins for the three Gymnosporangium species. Cluster ID from the MCL analysis; prot nb, number of proteins in the given cluster; SP nb, number of predicted secreted proteins in the cluster; and detailed protein ID for secreted proteins. Novel secreted proteins with no hit in the NCBI nr database are indicated. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.9962813.v1
title: MOESM13 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 13: Table S7. Clusters of secreted proteins for the three Gymnosporangium species. Cluster ID from the MCL analysis; prot nb, number of proteins in the given cluster; SP nb, number of predicted secreted proteins in the cluster; and detailed protein ID for secreted proteins. Novel secreted proteins with no hit in the NCBI nr database are indicated. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.9962834
title: MOESM6 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 6: Table S4. Concordant mutations between tumor and plasma samples
DOI: 10.6084/m9.figshare.9962834.v1
title: MOESM6 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 6: Table S4. Concordant mutations between tumor and plasma samples
DOI: 10.34740/kaggle/dsv/4311115
title: Industry Biscuit (Cookie) dataset
DOI: 10.6084/m9.figshare.16778587
title: Mapping mountain glaciers using an improved U-Net model with cSE

description: Global warming is melting glaciers. Changes in mountain glaciers have a tremendous impact on human life. Regular identification and extraction of glaciers from satellite images are necessary. However, when studying glaciers, material surrounding the glacier have high spectral similarity to glaciers and are easily misclassified in the identification process. Therefore, in this study of glacier extraction, we used an improved U-Net model (a channel-attention U-Net) to map glaciers. The model was trained on Landsat 8 Operational Land Imager (OLI) data and a Shuttle Radar Topography Mission (SRTM) digital elevation model (DEM), and was tested on glaciers in the Pamir Plateau. The results show that the channel-attention U-Net identifies glaciers with relatively high accuracy compared to U-Net and GlacierNet. The obtained results are fine-tuned by the conditional random field model, effectively reducing background misidentification.
DOI: 10.6084/m9.figshare.9962846
title: MOESM8 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 8: Table S5. Smoking associated signatures and platinum-based chemotherapy.
DOI: 10.6084/m9.figshare.9962846.v1
title: MOESM8 of Tracking longitudinal genetic changes of circulating tumor DNA (ctDNA) in advanced Lung adenocarcinoma treated with chemotherapy

description: Additional file 8: Table S5. Smoking associated signatures and platinum-based chemotherapy.
DOI: 10.6084/m9.figshare.9962849
title: MOESM4 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 4: Table S1. FPKM values and annotation results for each assembled G. japonicum unigene. (XLSX 7706 kb)
DOI: 10.6084/m9.figshare.9962849.v1
title: MOESM4 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 4: Table S1. FPKM values and annotation results for each assembled G. japonicum unigene. (XLSX 7706 kb)
DOI: 10.6084/m9.figshare.9962861
title: MOESM6 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 6: Table S2. KOG and KEGG annotation and classification of G. japonicum unigenes. (XLSX 93 kb)
DOI: 10.6084/m9.figshare.13108580
title: Additional file 2 of Genome-enabled insights into the biology of thrips as crop pests

description: Additional file 2. Workbook of large supplementary tables.
DOI: 10.6084/m9.figshare.13108580.v1
title: Additional file 2 of Genome-enabled insights into the biology of thrips as crop pests

description: Additional file 2. Workbook of large supplementary tables.
DOI: 10.6084/m9.figshare.13108583
title: Additional file 3 of Genome-enabled insights into the biology of thrips as crop pests

description: Additional file 3. Weighted correlation network analysis (WGCNA) modules of co-expressed gene sets of developmental stages.
DOI: 10.6084/m9.figshare.13108583.v1
title: Additional file 3 of Genome-enabled insights into the biology of thrips as crop pests

description: Additional file 3. Weighted correlation network analysis (WGCNA) modules of co-expressed gene sets of developmental stages.
DOI: 10.6084/m9.figshare.9962861.v1
title: MOESM6 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 6: Table S2. KOG and KEGG annotation and classification of G. japonicum unigenes. (XLSX 93 kb)
DOI: 10.34740/kaggle/dsv/7559761
title: Industry Biscuit (Lotus) dataset
DOI: 10.6084/m9.figshare.9962870
title: MOESM8 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 8: Table S3. CAZymes annotation results for Gymnosporangium unigenes in the dbCAN v2.0. AA, CAZyme with auxiliary activities; CBM, carbohydrate binding module; CE, carbohydrate esterase; GH, glycosyl hydrolase; GT, glycosyl transferase; PL, polysaccharide lyase. FPKM and Log10FPKM values are reported along CAZyme annotation. (XLSX 42 kb)
DOI: 10.6084/m9.figshare.9962870.v1
title: MOESM8 of Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

description: Additional file 8: Table S3. CAZymes annotation results for Gymnosporangium unigenes in the dbCAN v2.0. AA, CAZyme with auxiliary activities; CBM, carbohydrate binding module; CE, carbohydrate esterase; GH, glycosyl hydrolase; GT, glycosyl transferase; PL, polysaccharide lyase. FPKM and Log10FPKM values are reported along CAZyme annotation. (XLSX 42 kb)
DOI: 10.6084/m9.figshare.13108598
title: Additional file 8 of Genome-enabled insights into the biology of thrips as crop pests

description: Additional file 8. Supporting tables for Orthovenn comparison of innate immunity-associated transcripts in thrips vector species.
DOI: 10.6084/m9.figshare.13108598.v1
title: Additional file 8 of Genome-enabled insights into the biology of thrips as crop pests

description: Additional file 8. Supporting tables for Orthovenn comparison of innate immunity-associated transcripts in thrips vector species.
DOI: 10.6084/m9.figshare.13108601
title: Additional file 9 of Genome-enabled insights into the biology of thrips as crop pests

description: Additional file 9. Supporting tables of RNAseq expression outputs for conserved sex-specific genes in thrips species.
DOI: 10.6084/m9.figshare.13108601.v1
title: Additional file 9 of Genome-enabled insights into the biology of thrips as crop pests

description: Additional file 9. Supporting tables of RNAseq expression outputs for conserved sex-specific genes in thrips species.
DOI: 10.6084/m9.figshare.13632911.v1
title: Additional file 5 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 5. GO functional annotations and the number of DEG statistics.
DOI: 10.6084/m9.figshare.13632899
title: Additional file 1 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 1. Assembly of sainfoin transcriptome.
DOI: 10.6084/m9.figshare.13632899.v1
title: Additional file 1 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 1. Assembly of sainfoin transcriptome.
DOI: 10.6084/m9.figshare.13632914
title: Additional file 6 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 6. KEGG pathway annotation of DEGs between WF and AF of sainfoin in S1 and S3 stages.
DOI: 10.6084/m9.figshare.13632914.v1
title: Additional file 6 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 6. KEGG pathway annotation of DEGs between WF and AF of sainfoin in S1 and S3 stages.
DOI: 10.6084/m9.figshare.13632920
title: Additional file 8 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 8. Primers used for RT-qPCR analysis.
DOI: 10.6084/m9.figshare.13632920.v1
title: Additional file 8 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 8. Primers used for RT-qPCR analysis.
DOI: 10.6084/m9.figshare.13632908
title: Additional file 4 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 4. DEGs generated from WF and AF of sainfoin in S1 and S3 stages.
DOI: 10.6084/m9.figshare.13632908.v1
title: Additional file 4 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 4. DEGs generated from WF and AF of sainfoin in S1 and S3 stages.
DOI: 10.6084/m9.figshare.13632911
title: Additional file 5 of Transcriptomic and chemical analyses to identify candidate genes involved in color variation of sainfoin flowers

description: Additional file 5. GO functional annotations and the number of DEG statistics.