cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.pvmcvdnr0
title: A plea for scale, and why it matters for invasive species management, biodiversity, and conservation

description: Invasive species are suspected to be major contributors to biodiversity
 declines worldwide. Counterintuitively, however, invasive species effects
 are likely scale-dependent, and are hypothesized to be positively related
 to biodiversity at large spatial scales. Past studies investigating the
 effect of invasion on biodiversity have been mostly conducted at small
 scales (&lt;100 m2) that cannot represent large-dynamic landscapes by
 design. Therefore, replicated experimental evidence supporting a negative
 effect of invasive plants on biodiversity is lacking across many landscape
 types, including large grasslands. We collected data across eight large
 (333–809 ha) grassland landscapes managed with pyric herbivory—i.e., the
 recoupling of fire and grazing—to test how an invasive legume (Lespedeza
 cuneata) affected plant and bird communities at spatial grains ranging
 from 0.1 m2 to &gt;3,000,000 m2. L. cuneata invasion effects on
 grassland plant diversity and composition changed with scale; being
 negative at small spatial grains (0.1 m2) and neutral or positive at large
 spatial grains (&gt;3,000,000 m2). L. cuneata abundance did
 not significantly affect bird diversity at any spatial grain measured. L.
 cuneata may negatively affect biodiversity if abundances are greater than
 those observed in this study. However, previous research suggests
 that L. cuneata may not be capable of exceeding 20% canopy cover
 across large landscapes (&gt;400 ha). Control and eradication
 strategies can be costly and are fraught with risk. If data do not clearly
 support a negative L. cuneata abundance-biodiversity
 relationship, and if invasion is spatially limited across large
 landscapes, ongoing control and eradication efforts may be unwarranted and
 ineffective. Synthesis and applications: Invasive species effects gleaned
 from small-scale studies may not reliably predict their effects at larger
 scales. Although we recognize the importance of small-scale studies in
 potentially isolating individual mechanisms, management strategies based
 solely on results from small-scale studies of invasion are unlikely to
 increase or conserve biodiversity across large landscapes. Rather,
 processes that generate landscape heterogeneity—like pyric herbivory—are
 probably more important for promoting biodiversity across all scales.
 Scale is a central problem in ecology, and defining scale in management
 objectives is essential for effective biodiversity conservation.
DOI: 10.5061/dryad.np5hqbzzf
title: Data for: Responses to saltwater exposure vary across species, populations, and life-stages in anuran amphibians

description: To predict the impacts of environmental change on species, we must first
 understand the factors that limit the present-day ranges of species. Most
 anuran amphibians cannot survive at elevated salinities, which may drive
 their distribution in coastal locations. Previous research showed that
 coastal Hyla cinerea are locally adapted to brackish habitats in North
 Carolina (USA). Although Hyla squirella and Hyla chrysoscelis both inhabit
 coastal wetlands nearby, they have not been observed in saline habitats.
 We take advantage of naturally occurring microgeographic variation in
 coastal wetland occupancy exhibited by these congeneric treefrog species
 to explore how salt exposure affects oviposition site choice, hatching
 success, early tadpole survival, plasma osmolality, and tadpole body
 condition across coastal and inland locations. We observed higher survival
 among coastal H. cinerea tadpoles than inland H. cinerea, which
 corroborates previous findings. But contrary to expectations, coastal H.
 cinerea had lower survival than H. squirella and H. chrysoscelis,
 indicating that all three species may be able to persist in saline
 wetlands. We also observed differences in tadpole plasma osmolality across
 species, locations, and salinities, but these differences were not
 associated with survival rates in saltwater. Instead, coastal occupancy
 may be affected by stage-specific processes like higher probability of
 total clutch loss as shown by inland H. chrysoscelis or maladaptive egg
 deposition patterns as shown by inland H. squirella. Although we expected
 saltwater to be the primary filter driving species distributions along a
 coastal salinity gradient, it is likely that the factors dictating anuran
 ranges along the coast involve stage-, species-, and location specific
 processes that are mediated by ecological processes and life history
 traits.
DOI: 10.5061/dryad.wwpzgmsps
title: Transgenerational effects on body size and survival in brook charr (Salvelinus fontinalis)

description: Higher temperatures are now observed in several ecosystems and act as new
 selective agents that shape traits and fitness of individuals.
 Transgenerational effects may be important in modulating adaptation of
 future generations and buffering negative impacts of temperature changes.
 The potential for these effects may be important in freshwater fish
 species, as temperature is a key abiotic component of their environment.
 Yet, still, relatively few studies have assessed the presence and
 importance of transgenerational effects under natural conditions. The
 purpose of this study was to test how parental thermal conditions
 influenced offspring growth and survival following stocking in Brook charr
 (Salvelinus fontinalis). To do so, part of the breeders were exposed to a
 “cold” treatment while others were exposed to a “warm” treatment during
 the final steps of gonad maturation (constant 2°C difference between
 treatments along the seasonal temperature decrease). The impact on
 offspring of a selection treatment targeting production traits of interest
 (absence of sexual maturation at 1+, combined with increased growth) in
 breeders was also evaluated. After 7 to 8 months of growth in captivity,
 offspring were stocked in natural lakes. Their growth and survival were
 assessed about a year later. Offspring from “cold” breeders showed lower
 survival than those from “warm” breeders and the selection treatment had
 no effect on survival. However, the selection treatment was linked to
 lower Fulton’s condition index, which, in turn, was positively correlated
 to survival in lakes. This study highlights the importance of working in
 ecological/industrial context to fully assess the different impacts of
 transgenerational effects on traits and survival. Our results also have
 important implications for stocking practices used to support the sport
 fishing industry.
DOI: 10.25505/fiz.icsd.cc20tmj0
title: CSD 1871672: Experimental Crystal Structure Determination

description: Related Article: Patrik Djendjur, Thomas Schleid|2025|J.Solid State Chem.|350|125436|doi:10.1016/j.jssc.2025.125436
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc20tmk1
title: CSD 1871673: Experimental Crystal Structure Determination

description: Related Article: Patrik Djendjur, Thomas Schleid|2025|J.Solid State Chem.|350|125436|doi:10.1016/j.jssc.2025.125436
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc20tml2
title: CSD 1871674: Experimental Crystal Structure Determination

description: Related Article: Patrik Djendjur, Thomas Schleid|2025|J.Solid State Chem.|350|125436|doi:10.1016/j.jssc.2025.125436
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5061/dryad.z08kprrj4
title: The ribosome-inactivating proteins MAP30 and Momordin inhibit SARS-CoV-2

description: These data are related to a manuscript submitted to PLOS ONE. The
 recombinant proteins MAP30 and Momordin, prepared at the National
 Institute of Arthritis and Musculoskeletal and Skin Diseases, were
 analyzed for SARS-CoV-2 inhibition using A549-NLRV human lung cell assays
 performed at Southern Research during the Covid-19 pandemic. All viral
 inhibition and cell viability values reported can be derived from the raw
 data provided here. Some data are replicates. File dates correspond to
 those originally provided by and preserved at Southern Research,
 Birmingham AL.
description: High throughput screening (HTS) at Southern Research, Birmingham
 AL. All assay data files are as originally provided by Southern Research.
 Files are in .xlsx format. Data were visualized and analyzed with
 ActivityBase and OriginPro as described in the publication.
description: Microsoft Excel
DOI: 10.5517/ccdc.csd.cc2kv9yp
title: CCDC 2378783: Experimental Crystal Structure Determination

description: Related Article: Karampal Singh, Joshua Northcote-Smith, Xiao Feng, Kuldip Singh, Kogularamanan Suntharalingam|2025|ChemBioChem|26|e202400703|doi:10.1002/cbic.202400703
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l3c7b
title: CCDC 2386511: Experimental Crystal Structure Determination

description: Related Article: Qian Zhou, Yu Zhu, Peng Li, Wei-Hui Fang, Dong-Sheng Li|2025|Chem.Asian J.|20|e202401290|doi:10.1002/asia.202401290
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l8ht6
title: CCDC 2391458: Experimental Crystal Structure Determination

description: Related Article: A. V. Zalaltdinova, Yu. M. Sadykova, A. K. Smailov, D. P. Gerasimova, A. S. Gazizov, A. R. Burilov
|2024|Zh.Obshch.Khim.|94|2899|doi:10.1134/S1070363224110100
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ktr49
title: CCDC 2378231: Experimental Crystal Structure Determination

description: Related Article: Manik Das, Uttam Kumar Das, Shobhon Aich, Raju Biswas, Soumik Laha, Bidhan Chandra Samanta, Tithi Maity, Rajkumar Nandi, Dilip K. Maiti|2025|Chem.Asian J.|20|e202401310|doi:10.1002/asia.202401310
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mflrf
title: CCDC 2426145: Experimental Crystal Structure Determination

description: Related Article: Dmytro M. Khomenko, Tetyana V. Shokol, Olga V. Shablykina, Roman O. Doroshchuk, Oleksandr V. Vashchenko, Hanna V. Ivanova, Ilona V. Raspertova, Magdalina D. Tsapko, Sergiu Shova, Volodymir P. Khilya|2025|Chem. Sel.|10|e04082|doi:10.1002/slct.202504082
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mns9d
title: CCDC 2433044: Experimental Crystal Structure Determination

description: Related Article: A. V. Sartakovaa, S. V. Sysoeva, A. M. Makarenkoa, N. V. Kurat’evaa, D. P. Pishchura, K. V. Zherikovaa|2025|Russ.J.Coord.Chem.|51|628|doi:10.1134/S1070328425600536
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.7280/d1fm5f
title: Genetic variation in chromatin state across multiple tissues in Drosophila melanogaster

description: We use ATAC-seq to examine chromatin accessibility for four different
 tissues in Drosophila melanogaster: adult female brain, ovaries, and both
 wing and eye-antennal imaginal discs from males. Each tissue is assayed in
 eight different inbred strain genetic backgrounds, seven associated with a
 reference quality genome assembly. We develop a method for the quantile
 normalization of ATAC-seq fragments and test for differences in coverage
 among genotypes, tissues, and their interaction at 44099 peaks throughout
 the euchromatic genome. For the strains with reference quality genome
 assemblies, we correct ATAC-seq profiles for read mis-mapping due to
 nearby polymorphic structural variants (SVs). Comparing coverage among
 genotypes without accounting for SVs results in a highly elevated rate
 (55%) of identifying false positive differences in chromatin state between
 genotypes. After SV correction, we identify 1050, 30383, and 4508 regions
 whose peak heights are polymorphic among genotypes, among tissues, or
 exhibit genotype-by-tissue interactions, respectively. Finally, we
 identify 3988 candidate causative variants that explain at least 80% of
 the variance in chromatin state at nearby ATAC-seq peaks.
description: Several intermediate data tables
 resulting from different analyses are tarballed.
description: It is a tar.gz file.
DOI: 10.5517/ccdc.csd.cc2mxqgr
title: CCDC 2440675: Experimental Crystal Structure Determination

description: Related Article: Yujin Zi, Boxuan Yang, Ziqi Ye, Yu-Mei Lin, Qianyi Zhao, Binju Wang, Lei Gong|2025|Angew.Chem.,Int.Ed.|65|e21100|doi:10.1002/anie.202521100
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mxqkv
title: CCDC 2440678: Experimental Crystal Structure Determination

description: Related Article: Yujin Zi, Boxuan Yang, Ziqi Ye, Yu-Mei Lin, Qianyi Zhao, Binju Wang, Lei Gong|2025|Angew.Chem.,Int.Ed.|65|e21100|doi:10.1002/anie.202521100
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m3463
title: CCDC 2416084: Experimental Crystal Structure Determination

description: Related Article: Nishu Choudhary, Sanjay Yadav, Hardipsinh Gohil, Srinu Tothadi, Alok Ranjan Paital|2025|Angew.Chem.,Int.Ed.|64|e202509571|doi:10.1002/anie.202509571
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m3474
title: CCDC 2416085: Experimental Crystal Structure Determination

description: Related Article: Nishu Choudhary, Sanjay Yadav, Hardipsinh Gohil, Srinu Tothadi, Alok Ranjan Paital|2025|Angew.Chem.,Int.Ed.|64|e202509571|doi:10.1002/anie.202509571
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m3485
title: CCDC 2416086: Experimental Crystal Structure Determination

description: Related Article: Nishu Choudhary, Sanjay Yadav, Hardipsinh Gohil, Srinu Tothadi, Alok Ranjan Paital|2025|Angew.Chem.,Int.Ed.|64|e202509571|doi:10.1002/anie.202509571
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m3496
title: CCDC 2416087: Experimental Crystal Structure Determination

description: Related Article: Nishu Choudhary, Sanjay Yadav, Hardipsinh Gohil, Srinu Tothadi, Alok Ranjan Paital|2025|Angew.Chem.,Int.Ed.|64|e202509571|doi:10.1002/anie.202509571
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2c1xmz
title: CSD 2176591: Experimental Crystal Structure Determination

description: Related Article: Viktoriia Drushliak, Marek Szafrański|2022|Inorg.Chem.|61|14389|doi:10.1021/acs.inorgchem.2c02253
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5061/dryad.msbcc2g3b
title: Data from: Comparative studies on water- and vapor-based hydrothermal carbonization: process analysis

description: Hydrothermal carbonization (HTC) reactor systems used to convert wet
 organic wastes into value-added hydrochar are generally
 classified in the literature as liquid water-based (HTC) or vapor-based
 (VTC). However, the distinction between the two is often ambiguous. In
 this paper, we theoretically developed models for predicting reactor
 pressure, volume fraction of liquid water, and water distribution between
 phases as a function of temperature.
description: Methods are described in the manuscript http://dx.doi.org/10.3390/en13215733. Descriptions corresponding to each figure and table in the manuscript are placed on separate tabs to clarify abbreviations and summarize the data headings and units. Figures 1 and 6 were generated using the NIST Reference Thermodynamic and Transport Properties software (REFPROP) v. 10.0 (https://www.nist.gov/srd/refprop).  For Fig.6, the temperatures and moalr volumes of different feedstock and HTC conditions reported in the literature were plotted to the T-v diagram generated from the REFPROP.  These literature data points are included in the xlsx file.
DOI: 10.25505/fiz.icsd.cc1xl870
title: CSD 1775222: Experimental Crystal Structure Determination

description: Related Article: Patrik Djendjur, Thomas Schleid|2025|J.Solid State Chem.|350|125436|doi:10.1016/j.jssc.2025.125436
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2qt5xn
title: CSD 2526652: Experimental Crystal Structure Determination

description: Related Article: Martin Nieger|2026|ICSD Communication|||
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5061/dryad.ngf1vhhzx
title: Olfactory cues of risk and visual cues of safety interact with familiarity and phylogeny in shaping behavioral responses by littoral fishes

description: Prey incorporate information reliability when assessing risk of predation.
 Here, we report results of an experiment testing avoidance of chemical
 alarm cues derived from skin extract of blacknose shiners, Notropis
 heterolepis (BNS), attraction of a visible shoal of five BNS, and the
 combination of both, on fishes in Deming Lake where BNS occur. We then
 repeated the experiment in nearby Budd Lake where BNS do not occur. BNS
 avoided traps with conspecific alarm cues but did not respond to the
 presence of BNS shoals. Fathead minnows, Pimephales promelas (FHM) avoided
 traps chemically labeled with BNS alarm cue when a shoal was absent and
 avoided BNS shoals when traps were labeled with water (control). When both
 BNS alarm cue and BNS shoal were combined, antipredator response to BNS
 alarm cue invoked a shoaling response with the BNS shoal in the trap.
 Redbelly dace, Chrysomus eos (RBD) responded weakly to BNS cues in Deming
 Lake and ignored them in Budd Lake. Non-cyprinid species (brook
 stickleback Culaea inconstans and pumpkinseed sunfish, Lepomis gibbosus)
 did not respond to either olfactory or visual cues of BNS in Deming Lake.
 In Budd Lake, neither avoidance of BNS alarm cue nor attraction to BNS
 shoals surpassed the threshold of statistical significance, indicating a
 role of familiarity and learned recognition of risk and safety in
 cross-species reactions to olfactory and visual cues of heterospecifics.
description: Data were collected from field populations of small fishes in two
 lakes in Itasca State Park. Data are in an Excel file.