cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29332886
title: Fault Slip and Fluid Flow: Seismic Source Analysis to Assess Role of Multiple Slip Patches in Fault Permeability—Data Repository [Dataset]

description: This dataset is provided as supplementary material for the manuscript "Fault Slip and Fluid Flow: Seismic Source Analysis to Assess the Role of Multiple Slip Patches in Fault Permeability." It includes two main components. The 'data' folder contains all experimental outputs and input files used for the analyses presented in the study, including those for estimating seismic source parameters. Subfolders include waveforms from the ball-drop calibration experiment (balldrop), waveforms from the hydroshearing experiment (AE), and mechanical measurements (mecha) related to fluid flow, axial pressure, and other parameters. The 'notebook' folder contains Jupyter notebook scripts used to perform the analyses and generate the plots presented in the manuscript.
DOI: 10.6084/m9.figshare.29332886.v1
title: Fault Slip and Fluid Flow: Seismic Source Analysis to Assess Role of Multiple Slip Patches in Fault Permeability—Data Repository

description: This dataset is provided as supplementary material for the manuscript "Fault Slip and Fluid Flow: Seismic Source Analysis to Assess the Role of Multiple Slip Patches in Fault Permeability." It includes two main components. The 'data' folder contains all experimental outputs and input files used for the analyses presented in the study, including those for estimating seismic source parameters. Subfolders include waveforms from the ball-drop calibration experiment (balldrop), waveforms from the hydroshearing experiment (AE), and mechanical measurements (mecha) related to fluid flow, axial pressure, and other parameters. The 'notebook' folder contains Jupyter notebook scripts used to perform the analyses and generate the plots presented in the manuscript.
DOI: 10.6084/m9.figshare.29332886.v2
title: Fault Slip and Fluid Flow: Seismic Source Analysis to Assess Role of Multiple Slip Patches in Fault Permeability—Data Repository [Dataset]

description: This dataset is provided as supplementary material for the manuscript "Fault Slip and Fluid Flow: Seismic Source Analysis to Assess the Role of Multiple Slip Patches in Fault Permeability." It includes two main components. The 'data' folder contains all experimental outputs and input files used for the analyses presented in the study, including those for estimating seismic source parameters. Subfolders include waveforms from the ball-drop calibration experiment (balldrop), waveforms from the hydroshearing experiment (AE), and mechanical measurements (mecha) related to fluid flow, axial pressure, and other parameters. The 'notebook' folder contains Jupyter notebook scripts used to perform the analyses and generate the plots presented in the manuscript.
DOI: 10.15468/dl.v7bh4k
title: Occurrence Download

description: A dataset containing 46239 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physeter macrocephalus",
 "Year 2010-2025"
 ]
}

 The dataset includes 46239 records from 289 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005703-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jr93xh
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen, Occurrence evidence)",
 "GadmGid is one of (KAZ, UZB, TKM, KGZ, TJK)",
 "OccurrenceStatus is Present",
 "TaxonKey is Allium talassicum"
 ]
}

 The dataset includes 34 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005704-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqvjak
title: Occurrence Download

description: A dataset containing 1428 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Panthera onca",
 "Country is Mexico",
 "Year is greater than or equal to 1900",
 "Year is less than or equal to 2025",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Unknown evidence)"
 ]
 }
 }
 ]
}

 The dataset includes 1428 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005705-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfhubj
title: Occurrence Download

description: A dataset containing 969 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fauna y Flora del proyecto: Solar Buga 2"
 ]
}

 The dataset includes 969 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005707-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ud7v7x
title: Occurrence Download

description: A dataset containing 968 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Oceania",
 "OccurrenceStatus is Present",
 "TaxonKey is Epipremnum pinnatum"
 ]
}

 The dataset includes 968 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005708-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17469983
title: Abwanderung nach Preiserhöhung /

description: Sample preview of Abwanderung nach Preiserhöhung /. Full dataset available at https://buy.stripe.com/4gM28q8iT26x8xgdS30cs0a
DOI: 10.5281/zenodo.17469984
title: Abwanderung nach Preiserhöhung /

description: Sample preview of Abwanderung nach Preiserhöhung /. Full dataset available at https://buy.stripe.com/4gM28q8iT26x8xgdS30cs0a
DOI: 10.5281/zenodo.17469951
title: Manuscript data set
DOI: 10.5281/zenodo.17469952
title: Manuscript data set
DOI: 10.6084/m9.figshare.30472487
title: Machine-Learning Accelerated Computational Spectroscopy Reveals Vibrational Signature of the Oxidation Level of Graphene in Contact with Water

description: The training dataset of DPMP model and the input files that used to train the DPMP model, run the DPMD simulation and evaluate the DPMP model.
DOI: 10.6084/m9.figshare.30472487.v2
title: Machine-Learning Accelerated Computational Spectroscopy Reveals Vibrational Signature of the Oxidation Level of Graphene in Contact with Water

description: The training dataset of DPMP model and the input files that used to train the DPMP model, run the DPMD simulation and evaluate the DPMP model.
DOI: 10.6084/m9.figshare.30472487.v1
title: The source data of "Machine-Learning Accelerated Computational Spectroscopy Reveals Vibrational Signature of the Oxidation Level of Graphene in Contact with Water"

description: The training dataset of DPMP model and the input files that used to train the DPMP model, run the DPMD simulation and evaluate the DPMP model.
DOI: 10.15468/dl.45ndhf
title: Occurrence Download

description: A dataset containing 793736 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Human Observation, Material sample, Material citation, Specimen, Living Specimen, Machine Observation)",
 "Geometry POLYGON((-87.35305 14.56172,-87.58425 14.23379,-87.44034 13.88934,-87.16667 13.75723,-86.97322 13.87519,-86.83639 14.04033,-86.72078 14.2503,-87.08461 14.61465,-87.35305 14.56172))",
 "IucnRedListCategory is one of (EX, EW, CR, EN, VU, NT, LC, DD, NE)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 793736 records from 131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005691-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3bkgcd
title: Occurrence Download

description: A dataset containing 15444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lampornis amethystinus"
 ]
}

 The dataset includes 15444 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005710-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rqjpxc
title: Occurrence Download

description: A dataset containing 520 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kogia breviceps",
 "Year 2010-2020"
 ]
}

 The dataset includes 520 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005713-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17469993
title: Abwanderung nach schlechtem Support-Erlebnis /

description: Sample preview of Abwanderung nach schlechtem Support-Erlebnis /. Full dataset available at https://buy.stripe.com/3cI9AS9mXcLb4h0eW70cs09
DOI: 10.5281/zenodo.17469994
title: Abwanderung nach schlechtem Support-Erlebnis /

description: Sample preview of Abwanderung nach schlechtem Support-Erlebnis /. Full dataset available at https://buy.stripe.com/3cI9AS9mXcLb4h0eW70cs09
DOI: 10.15468/dl.jskg93
title: Occurrence Download

description: A dataset containing 42240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physeter macrocephalus",
 "Year 2010-2020"
 ]
}

 The dataset includes 42240 records from 259 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005712-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bfck4m
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen, Occurrence evidence)",
 "GadmGid is one of (TJK, KAZ, UZB, TKM, KGZ)",
 "OccurrenceStatus is Present",
 "TaxonKey is Ungernia sewerzowii"
 ]
}

 The dataset includes 30 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005714-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17402897
title: Streptactin Binding Plasticity NGS from deep Ribosome Display
DOI: 10.15468/dl.b8zwm7
title: Occurrence Download

description: A dataset containing 3246982 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Tanzania, United Republic of",
 "OccurrenceStatus is Present",
 "Year 1000-2025"
 ]
}

 The dataset includes 3246982 records from 1158 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005696-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5522/04/30963592
title: <b>Superoxide dismutase (SOD1) Degradome Foundation </b><b>Atlas</b>

description: This open-access dataset presents <b>Version 1 of the SOD1 Degradome Foundation Atlas</b>, a comprehensive proteolytic peptide resource designed to advance mechanistic, translational, and biomarker research in amyotrophic lateral sclerosis (ALS) and related neurodegenerative diseases.The atlas systematically enumerates and annotates all theoretically possible proteolytic fragments derived from SOD1, a central molecular driver of familial ALS. Rather than treating SOD1 as a single static enzyme, this resource captures SOD1 as a dynamic ensemble of peptide fragments generated through regulated proteolysis, protein turnover, and disease-associated processing. This fragment-centric perspective reflects growing evidence that SOD1 toxicity, aggregation, neuroinflammation, and therapeutic responsiveness are mediated at the peptide level.Version 1 includes wild-type SOD1 and selected pathogenic variants associated with intracellular aggregation and neurotoxicity. Each peptide entry is annotated with detailed biochemical and biophysical properties, enabling direct integration with mass-spectrometry pipelines, biomarker discovery workflows, autoantibody profiling, and computational modelling approaches. The dataset supports cross-comparison with other biomarker degradomes, including neurofilament and RNA-binding protein atlases, facilitating systems-level analyses of neurodegeneration.The SOD1 Degradome Foundation Atlas is particularly relevant for researchers investigating ALS pathogenesis, protein aggregation, neuroinflammation, and therapeutic strategies targeting SOD1 expression or processing, including antisense oligonucleotide approaches. By providing a structured, peptide-level reference framework, the atlas supports hypothesis generation, experimental validation, and translational discovery.All data are supplied in standardised, analysis-ready formats for seamless use in bioinformatics and statistical environments.<b>Reproducibility</b>All datasets are fully reproducible using open-source Python workflows provided in the repository. The computational pipeline is transparent, documented, and readily adaptable for future updates, including the addition of newly identified SOD1 cleavage sites, isoforms, and disease-associated mutations, following the degradome methodology described in [1].<b>Reference</b>[1] Petzold A. Proteolysis-Based Biomarker Repertoire of the Neurofilament Proteome. <i>Journal of Neurochemistry</i>. 2025;169:e70023. doi:10.1111/jnc.70023. PMID: 40066701; PMCID: PMC11894590.
DOI: 10.5522/04/30963592.v1
title: <b>Superoxide dismutase (SOD1) Degradome Foundation </b><b>Atlas</b>

description: This open-access dataset presents <b>Version 1 of the SOD1 Degradome Foundation Atlas</b>, a comprehensive proteolytic peptide resource designed to advance mechanistic, translational, and biomarker research in amyotrophic lateral sclerosis (ALS) and related neurodegenerative diseases.The atlas systematically enumerates and annotates all theoretically possible proteolytic fragments derived from SOD1, a central molecular driver of familial ALS. Rather than treating SOD1 as a single static enzyme, this resource captures SOD1 as a dynamic ensemble of peptide fragments generated through regulated proteolysis, protein turnover, and disease-associated processing. This fragment-centric perspective reflects growing evidence that SOD1 toxicity, aggregation, neuroinflammation, and therapeutic responsiveness are mediated at the peptide level.Version 1 includes wild-type SOD1 and selected pathogenic variants associated with intracellular aggregation and neurotoxicity. Each peptide entry is annotated with detailed biochemical and biophysical properties, enabling direct integration with mass-spectrometry pipelines, biomarker discovery workflows, autoantibody profiling, and computational modelling approaches. The dataset supports cross-comparison with other biomarker degradomes, including neurofilament and RNA-binding protein atlases, facilitating systems-level analyses of neurodegeneration.The SOD1 Degradome Foundation Atlas is particularly relevant for researchers investigating ALS pathogenesis, protein aggregation, neuroinflammation, and therapeutic strategies targeting SOD1 expression or processing, including antisense oligonucleotide approaches. By providing a structured, peptide-level reference framework, the atlas supports hypothesis generation, experimental validation, and translational discovery.All data are supplied in standardised, analysis-ready formats for seamless use in bioinformatics and statistical environments.<b>Reproducibility</b>All datasets are fully reproducible using open-source Python workflows provided in the repository. The computational pipeline is transparent, documented, and readily adaptable for future updates, including the addition of newly identified SOD1 cleavage sites, isoforms, and disease-associated mutations, following the degradome methodology described in [1].<b>Reference</b>[1] Petzold A. Proteolysis-Based Biomarker Repertoire of the Neurofilament Proteome. <i>Journal of Neurochemistry</i>. 2025;169:e70023. doi:10.1111/jnc.70023. PMID: 40066701; PMCID: PMC11894590.
DOI: 10.15468/dl.ymsh74
title: Occurrence Download

description: A dataset containing 219998 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Malaysia",
 "Geometry POLYGON((102.19878 2.86886,104.48618 2.86886,104.48618 4.8154,102.19878 4.8154,102.19878 2.86886))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 219998 records from 292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081202-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83kmzy
title: Occurrence Download

description: A dataset listing the 2351 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Flora Mycologica Iberica Project database"
 ]
}

 The dataset's 2351 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081246-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gy9snu
title: Occurrence Download

description: A dataset containing 606 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-1.58442 45.50631,-2.69332 42.82803,2.62864 41.64542,3.15978 41.43393,3.53831 41.63413,4.08191 41.88488,4.76391 42.19675,8.21477 43.53795,6.96119 45.9987,6.7574 46.14517,6.76377 46.41104,6.0953 46.08594,5.85808 46.14166,6.11599 46.36614,-1.58442 45.50631))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (da86174a-a605-43a4-a5e8-53d484152cd3, 2089ce96-4fb5-4a20-999c-3ccf45a27a4d, ab733144-7043-4e88-bd4f-fca7bf858880, 7c4f3b54-fc4b-42f3-a664-3ca93d12e10f, ada19a05-4216-44c7-aa4f-6e7177bcb0ac, 64ee55c9-570a-42af-b7da-3f13c6b4e5a9, c8d737e0-2ff8-42e8-b8fc-6b805d26fc5f, e2e717bf-551a-4917-bdc9-4fa0f342c530, 1928bdf0-f5d2-11dc-8c12-b8a03c50a862)",
 "TaxonKey is Persicaria amphibia",
 "Year 2016-2026"
 ]
}

 The dataset includes 606 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081269-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18164154
title: TABLE 1 in A new species of Cnemaspis (Squamata: Gekkonidae) from Temburong District, Brunei Darussalam

description: TABLE 1. The results of pairwise perMANOVA. Single asterisk and double asterisks indicate statistically different pairs at the significance levels of 0.05 and 0.01, respectively, after the multiple testing control.
Species pairDfSumSQFR2Adjusted pCnemaspis gituen sp. nov.:C. lagang10.190915.34580.48960.0028**C. kendallii10.439334.53210.52690.0028**C. nigridia10.320424.62790.51710.0028**C. puterisantubongae10.176212.64680.44150.0028**C. paripari10.381029.62500.56290.0028**C. leucura10.214215.08390.47010.0028**C. matahari10.159412.29490.52780.0224*Cnemaspis lagang:C. kendallii10.383530.25470.49390.0028**C. nigridia10.335725.93500.53000.0028**C. puterisantubongae10.324323.43430.59430.0028**C. paripari10.278221.74000.48590.0028**C. leucura10.391927.76950.62030.0028**C. matahari10.152911.91320.51990.0280*Cnemaspis kendallii:C. nigridia10.454935.06070.47990.0028**C. puterisantubongae10.487836.28900.53930.0028**C. paripari10.584045.32280.54390.0028**C. leucura10.436732.10810.50080.0028**C. matahari10.225017.38580.40070.0056**Cnemaspis nigridia:C. puterisantubongae10.13869.91380.30120.0056**C. paripari10.291422.16450.42490.0028**C. leucura10.200614.16140.37110.0028**C. matahari10.11288.41630.31860.0084**Cnemaspis puterisantubongae:C. paripari10.213615.44040.40170.0028**C. leucura10.15439.94540.36910.0028**C. matahari10.09356.23690.36180.0420*Cnemaspis leucura:C. paripari10.220415.71280.39570.0028**C. matahari10.06874.49580.27250.0196*Cnemaspis paripari:C. matahari10.01731.30920.06781.0000
description: Published as part of Kurita, Takaki, Kojima, Yosuke, Nishikawa, Kanto & Grafe, T. Ulmar, 2025, A new species of Cnemaspis (Squamata: Gekkonidae) from Temburong District, Brunei Darussalam, pp. 517 in Zootaxa 5725 (4) on page 517, DOI: 10.11646/zootaxa.5725.4.4, http://zenodo.org/record/17869903
DOI: 10.5281/zenodo.18164155
title: TABLE 1 in A new species of Cnemaspis (Squamata: Gekkonidae) from Temburong District, Brunei Darussalam

description: TABLE 1. The results of pairwise perMANOVA. Single asterisk and double asterisks indicate statistically different pairs at the significance levels of 0.05 and 0.01, respectively, after the multiple testing control.
Species pairDfSumSQFR2Adjusted pCnemaspis gituen sp. nov.:C. lagang10.190915.34580.48960.0028**C. kendallii10.439334.53210.52690.0028**C. nigridia10.320424.62790.51710.0028**C. puterisantubongae10.176212.64680.44150.0028**C. paripari10.381029.62500.56290.0028**C. leucura10.214215.08390.47010.0028**C. matahari10.159412.29490.52780.0224*Cnemaspis lagang:C. kendallii10.383530.25470.49390.0028**C. nigridia10.335725.93500.53000.0028**C. puterisantubongae10.324323.43430.59430.0028**C. paripari10.278221.74000.48590.0028**C. leucura10.391927.76950.62030.0028**C. matahari10.152911.91320.51990.0280*Cnemaspis kendallii:C. nigridia10.454935.06070.47990.0028**C. puterisantubongae10.487836.28900.53930.0028**C. paripari10.584045.32280.54390.0028**C. leucura10.436732.10810.50080.0028**C. matahari10.225017.38580.40070.0056**Cnemaspis nigridia:C. puterisantubongae10.13869.91380.30120.0056**C. paripari10.291422.16450.42490.0028**C. leucura10.200614.16140.37110.0028**C. matahari10.11288.41630.31860.0084**Cnemaspis puterisantubongae:C. paripari10.213615.44040.40170.0028**C. leucura10.15439.94540.36910.0028**C. matahari10.09356.23690.36180.0420*Cnemaspis leucura:C. paripari10.220415.71280.39570.0028**C. matahari10.06874.49580.27250.0196*Cnemaspis paripari:C. matahari10.01731.30920.06781.0000
description: Published as part of Kurita, Takaki, Kojima, Yosuke, Nishikawa, Kanto & Grafe, T. Ulmar, 2025, A new species of Cnemaspis (Squamata: Gekkonidae) from Temburong District, Brunei Darussalam, pp. 517 in Zootaxa 5725 (4) on page 517, DOI: 10.11646/zootaxa.5725.4.4, http://zenodo.org/record/17869903