cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6360749
title: Data for Yunjun et al. (2022) on SAR Range Geolocation

description: This repository contains the data used in Yunjun et al. (2022, IEEE-TGRS). Yunjun, Z., Fattahi, H., Pi, X., Rosen, P., Simons, M., Agram, P., & Aoki, Y. (2022). Range Geolocation Accuracy of C-/L-band SAR and its Implications for Operational Stack Coregistration. <em>IEEE Transactions on Geoscience and Remote Sensing, 60</em>, doi:10.1109/TGRS.2022.3168509. It includes the following 3 test sites: Sentinel-1 ascending track 149 in northern Chile Sentinel-1 descending track 156 in northern Chile ALOS-2 descending track 23 in southern Kyushu, Japan For each test site, it includes the following datasets: SAR range and azimuth offset stack (using ISCE-2 / PyCuAmpcor) SAR range offset time series (using MintPy) JPL high-resolution Global Ionospheric Maps (GIM) and the topside TEC for ChileSenAT149. Solid Earth tides prediction (using PySolid) ERA5 tropospheric delay prediction (using PyAPS) Useful links: HDF-EOS5 file (*.he5) structure is described in https://mintpy.readthedocs.io/en/latest/hdfeos5/. HDF5/MintPy file (*.h5) structure is described in https://mintpy.readthedocs.io/en/latest/api/data_structure/. Related Notebooks at https://github.com/yunjunz/2022-Geolocation.
DOI: 10.5281/zenodo.6360748
title: Data for Yunjun et al. (2022) on SAR Range Geolocation

description: This repository contains the data used in Yunjun et al. (2022, IEEE-TGRS). Yunjun, Z., Fattahi, H., Pi, X., Rosen, P., Simons, M., Agram, P., & Aoki, Y. (2022). Range Geolocation Accuracy of C-/L-band SAR and its Implications for Operational Stack Coregistration. <em>IEEE Transactions on Geoscience and Remote Sensing, 60</em>, doi:10.1109/TGRS.2022.3168509. It includes the following 3 test sites: Sentinel-1 ascending track 149 in northern Chile Sentinel-1 descending track 156 in northern Chile ALOS-2 descending track 23 in southern Kyushu, Japan For each test site, it includes the following datasets: SAR range and azimuth offset stack (using ISCE-2 / PyCuAmpcor) SAR range offset time series (using MintPy) JPL high-resolution Global Ionospheric Maps (GIM) and the topside TEC for ChileSenAT149. Solid Earth tides prediction (using PySolid) ERA5 tropospheric delay prediction (using PyAPS) Useful links: HDF-EOS5 file (*.he5) structure is described in https://mintpy.readthedocs.io/en/latest/hdfeos5/. HDF5/MintPy file (*.h5) structure is described in https://mintpy.readthedocs.io/en/latest/api/data_structure/. Related Notebooks at https://github.com/yunjunz/2022-Geolocation.
DOI: 10.6084/m9.figshare.19808881
title: data.doc

description: the data is the origin data of the paper
DOI: 10.6084/m9.figshare.19808881.v1
title: data.doc

description: the data is the origin data of the paper
DOI: 10.5281/zenodo.6569885
title: replication-materials-borlasekn

description: The code and data in this repository is the research workflow for a MACS 30200 "Perspectives on Computational Research" final project at the University of Chicago. This project studied the performance of parenthood on Twitter to answer the question: To what extent does the expression of motherhood compare to that of fatherhood on Twitter?
DOI: 10.5281/zenodo.6569884
title: replication-materials-borlasekn

description: The code and data in this repository is the research workflow for a MACS 30200 "Perspectives on Computational Research" final project at the University of Chicago. This project studied the performance of parenthood on Twitter to answer the question: To what extent does the expression of motherhood compare to that of fatherhood on Twitter?
DOI: 10.34740/kaggle/dsv/3675854
title: BBC News
DOI: 10.6084/m9.figshare.19808900
title: Additional file 1 of Biliary obstruction and pancreatitis after duodenal stent placement in the descending duodenum: a retrospective study

description: Additional file 1. Database of this study.
DOI: 10.6084/m9.figshare.19808900.v1
title: Additional file 1 of Biliary obstruction and pancreatitis after duodenal stent placement in the descending duodenum: a retrospective study

description: Additional file 1. Database of this study.
DOI: 10.6084/m9.figshare.19808939
title: Additional file 2 of APOBEC3 mutational signatures are associated with extensive and diverse genomic instability across multiple tumour types

description: Additional file 2 Supplementary Data 1. Excel file containing details of the means and median ratios, and p-values for each of the tumour type and genomic instability measure combinations described in Fig. 3.
DOI: 10.6084/m9.figshare.19808939.v1
title: Additional file 2 of APOBEC3 mutational signatures are associated with extensive and diverse genomic instability across multiple tumour types

description: Additional file 2 Supplementary Data 1. Excel file containing details of the means and median ratios, and p-values for each of the tumour type and genomic instability measure combinations described in Fig. 3.
DOI: 10.6084/m9.figshare.19808934.v1
title: Additional file 1 of Papillary muscle avulsion following balloon mitral valvotomy evaluated with three-dimensional echocardiography

description: Additional file 1: All echocardiography data of the patient.
DOI: 10.6084/m9.figshare.19808934
title: Additional file 1 of Papillary muscle avulsion following balloon mitral valvotomy evaluated with three-dimensional echocardiography

description: Additional file 1: All echocardiography data of the patient.
DOI: 10.6084/m9.figshare.19808955.v1
title: Additional file 1 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 1. Primers used in this study. Information related to primers used for miRNA and target gene expression, CRIPSR-Cas9 and luciferase assays.
DOI: 10.6084/m9.figshare.19808955
title: Additional file 1 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 1. Primers used in this study. Information related to primers used for miRNA and target gene expression, CRIPSR-Cas9 and luciferase assays.
DOI: 10.6084/m9.figshare.19808958
title: Additional file 2 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 2. Mature miRNA percentage of sequencing read counts in infected and control porcine ileum samples. File containing the percentage of read counts for each miRNA detected in ileum from S. Typhimurium infected and control pigs.
DOI: 10.6084/m9.figshare.19808958.v1
title: Additional file 2 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 2. Mature miRNA percentage of sequencing read counts in infected and control porcine ileum samples. File containing the percentage of read counts for each miRNA detected in ileum from S. Typhimurium infected and control pigs.
DOI: 10.6084/m9.figshare.19808961.v1
title: Additional file 3 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 3. Differentially expressed miRNAs after S. Typhimurium infection in ileum at 2 dpi. Differentially expressed miRNAs in porcine ileum, including expression fold change, p-values and FDR corrected p-values.
DOI: 10.6084/m9.figshare.19808961
title: Additional file 3 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 3. Differentially expressed miRNAs after S. Typhimurium infection in ileum at 2 dpi. Differentially expressed miRNAs in porcine ileum, including expression fold change, p-values and FDR corrected p-values.
DOI: 10.6084/m9.figshare.19808964
title: Additional file 4 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 4. miRNA target gene list generated from differentially expressed miRNA and genes in porcine ileum after S. Typhimurium infection at 2 dpi. miRNA targets were selected using the miRNA target database miRTarbase (release 6.0) and TargetScan (release 7.0).
DOI: 10.6084/m9.figshare.19808964.v1
title: Additional file 4 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 4. miRNA target gene list generated from differentially expressed miRNA and genes in porcine ileum after S. Typhimurium infection at 2 dpi. miRNA targets were selected using the miRNA target database miRTarbase (release 6.0) and TargetScan (release 7.0).
DOI: 10.6084/m9.figshare.19808967
title: Additional file 5 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 5. Predicted functions altered by miRNA dysregulation in porcine ileum. Gene ontology analysis of predicted miRNA target genes that were differentially expressed in porcine ileum after S. Typhimurium infection at 2 dpi.
DOI: 10.6084/m9.figshare.19808967.v1
title: Additional file 5 of Study of microRNA expression in Salmonella Typhimurium-infected porcine ileum reveals miR-194a-5p as an important regulator of the TLR4-mediated inflammatory response

description: Additional file 5. Predicted functions altered by miRNA dysregulation in porcine ileum. Gene ontology analysis of predicted miRNA target genes that were differentially expressed in porcine ileum after S. Typhimurium infection at 2 dpi.
DOI: 10.34740/kaggle/dsv/3675962
title: Michelin Guide Restaurants 2021
DOI: 10.6084/m9.figshare.19809010.v1
title: molecules-1692252-supplementary.pdf

description: The data represents results associated with seed germination assays, where flavonoids and bacterial cell-free supernatant has been incorporated via priming technique. The experiments were conducted to unveil the potential of both biostimulants to improve seed germination of two oil seed crops (soybean and canola) under ideal and salt stress conditions
DOI: 10.6084/m9.figshare.19809010
title: molecules-1692252-supplementary.pdf

description: The data represents results associated with seed germination assays, where flavonoids and bacterial cell-free supernatant has been incorporated via priming technique. The experiments were conducted to unveil the potential of both biostimulants to improve seed germination of two oil seed crops (soybean and canola) under ideal and salt stress conditions
DOI: 10.6084/m9.figshare.19803790.v1
title: A 10 m resolution urban green space map for major Latin American cities from Sentinel-2 remote sensing images and OpenStreetMap

description: Here we produced the first 10 m resolution urban green space (UGS) map for the main urban clusters across 371 major Latin American cities as of 2017. Our approach applied a supervised classification of Sentinel-2 satellite imagery and UGS samples derived from OpenStreetMap (OSM). The overall accuracy of this UGS map in 11 randomly selected cities was 0.87, evaluated by independently collected validation samples (‘ground truth’). We further improved mapping quality through a visual inspection and additional sample collection. The resulting UGS map enables studies to measure area, spatial configuration, and human exposures to UGS, facilitating studies about the relationship between UGS and human exposures to environmental hazards, public health outcomes, and environmental justice issues in Latin American cities. UGS in this map series includes grass, shrub, forest, and farmland, and non-UGS included buildings, pavement, roads, barren land, and dry vegetation. The UGS map series includes two sets of files: (1) binary UGS maps at 10 m spatial resolution in GEOTIFF format (UGS.zip), with each of the 371 cities being an individual map. Mapped value of 1 indicates UGS, 0 indicates non-UGS, and no data (with value of -32768) indicates areas outside the mapped boundary or water bodies; (2) a shapefile of mapped boundaries (Boundaries.zip). The boundary file contains city name, country name and its ISO-2 country code, and an ID field linking each city's boundary to the corresponding UGS map.
DOI: 10.6084/m9.figshare.19808677
title: MetaDTA - BindingDB Example Dataset

description: Training/test dataset for MetaDTA running example
DOI: 10.6084/m9.figshare.19808677.v1
title: BindingDB Example Dataset

description: Training/test dataset for MetaDTA running example
DOI: 10.5066/p9oc5bbt
title: Cool Season (September-June) Total Precipitation Reconstruction for Deschutes County, Oregon, 1000-1991 CE

description: A tree-ring based cool season (September-June) total precipitation reconstruction for Deschutes County, Oregon, spanning years 1000-1991 CE
DOI: 10.5281/zenodo.6570036
title: Dataset for "Observational evidence for the non-suppression effect of atmospheric chemical modification on the ice nucleation activity of East Asian dust"

description: These are datasets for the manuscript titled "Observational evidence for the non-suppression effect of atmospheric chemical modification on the ice nucleation activity of East Asian dust".
DOI: 10.5281/zenodo.6568945
title: HUVEC monolayer under periodic and step pressure stimulation

description: Recorded images at 0.5 and 1 frame per second. HUVEC monolayer under periodic pressure stimulation.
DOI: 10.5281/zenodo.6568944
title: HUVEC monolayer under periodic and step pressure stimulation

description: Recorded images at 0.5 and 1 frame per second. HUVEC monolayer under periodic pressure stimulation.
DOI: 10.6084/m9.figshare.19809047
title: Helicobacter pylori <i>promotes inflammatory factor secretion and lung injury through VacA exotoxin-mediated activation of NF-κB signaling</i>

description: Previous reports have shown that <i>Helicobacter pylori</i> (<i>H. pylori</i>) infection is associated with respiratory diseases. However, the pathogenesis remains unclear. Vacuolating cytotoxin A (VacA) is a major <i>H. pylori</i> exotoxin. In this study, we investigated the signaling pathways involved in the inflammatory response to <i>H. pylori</i> infection and VacA. Mice were treated with <i>H. pylori</i> and VacA, and histopathological analysis of lung tissues was performed using hematoxylin-eosin, Masson’s trichrome, and periodic acid Schiff staining. The secretion of inflammatory cytokines was evaluated by enzyme-linked immunosorbent assay. The expression of VacA, nuclear factor-kappa B (NF-κB), and p65 NF-κB was analyzed by Western blotting and immunofluorescence. Cell proliferation and apoptosis were assessed using the MTS assay and flow cytometry, respectively. In mice, <i>H. pylori</i> infection and VacA treatment promoted the secretion of the inflammatory factors interleukin 1β (IL-1β), tumor necrosis factor α (TNF-α), IL-6, and IL-8, increased p65 NF-κB protein phosphorylation, and induced lung injury. Furthermore, <i>H. pylori</i> infection promoted VacA production. In an <i>in vitro</i> cell model, VacA treatment significantly suppressed the proliferation of WI-38 and BEAS-2B cells, promoted apoptosis, induced TNF-α, IL-1β, IL-6, and IL-8 secretion, and promoted p65 NF-κB protein phosphorylation and NF-κB nuclear transfer. The NF-κB inhibitor BAY11-7082 alleviated VacA-induced inflammation and apoptosis and increased cell viability. In conclusion, VacA promotes the secretion of inflammatory factors and induces lung injury through NF-κB signaling.
DOI: 10.6084/m9.figshare.19809047.v1
title: Helicobacter pylori <i>promotes inflammatory factor secretion and lung injury through VacA exotoxin-mediated activation of NF-κB signaling</i>

description: Previous reports have shown that <i>Helicobacter pylori</i> (<i>H. pylori</i>) infection is associated with respiratory diseases. However, the pathogenesis remains unclear. Vacuolating cytotoxin A (VacA) is a major <i>H. pylori</i> exotoxin. In this study, we investigated the signaling pathways involved in the inflammatory response to <i>H. pylori</i> infection and VacA. Mice were treated with <i>H. pylori</i> and VacA, and histopathological analysis of lung tissues was performed using hematoxylin-eosin, Masson’s trichrome, and periodic acid Schiff staining. The secretion of inflammatory cytokines was evaluated by enzyme-linked immunosorbent assay. The expression of VacA, nuclear factor-kappa B (NF-κB), and p65 NF-κB was analyzed by Western blotting and immunofluorescence. Cell proliferation and apoptosis were assessed using the MTS assay and flow cytometry, respectively. In mice, <i>H. pylori</i> infection and VacA treatment promoted the secretion of the inflammatory factors interleukin 1β (IL-1β), tumor necrosis factor α (TNF-α), IL-6, and IL-8, increased p65 NF-κB protein phosphorylation, and induced lung injury. Furthermore, <i>H. pylori</i> infection promoted VacA production. In an <i>in vitro</i> cell model, VacA treatment significantly suppressed the proliferation of WI-38 and BEAS-2B cells, promoted apoptosis, induced TNF-α, IL-1β, IL-6, and IL-8 secretion, and promoted p65 NF-κB protein phosphorylation and NF-κB nuclear transfer. The NF-κB inhibitor BAY11-7082 alleviated VacA-induced inflammation and apoptosis and increased cell viability. In conclusion, VacA promotes the secretion of inflammatory factors and induces lung injury through NF-κB signaling.
DOI: 10.34740/kaggle/dsv/3676395
title: Russian Invasion of Ukraine
DOI: 10.25430/researchdata.cab.unipd.it.00000646
title: Hydrodynamic feedback of salt-marsh loss in shallow back-barrier tidal systems

description: Hydrodynamic feedback of salt-marsh loss in shallow back-barrier tidal systems. Application to the Venice Lagoon, Italy
DOI: 10.6084/m9.figshare.19802704
title: A momentum-based prediction model of backwater rise within and downstream of a vegetated patch in nonuniform flow

description: The dataset describes the experimental data about water surface in the nonuniform flow through the double-layer vegetation and large wood jams. This data set is used to verify the phase diagram of backwater rise . It accompanies the journal article submission entitled " A momentum-based prediction model of backwater rise within and downstream of a vegetated patch in nonuniform flow".
DOI: 10.6084/m9.figshare.19802704.v1
title: A momentum-based prediction model of backwater rise within and downstream of a vegetated patch in nonuniform flow

description: The dataset describes the experimental data about water surface in the nonuniform flow through the double-layer vegetation and large wood jams. This data set is used to verify the phase diagram of backwater rise . It accompanies the journal article submission entitled " A momentum-based prediction model of backwater rise within and downstream of a vegetated patch in nonuniform flow".
DOI: 10.34740/kaggle/dsv/3676503
title: Dutch News Articles
DOI: 10.5281/zenodo.6569960
title: Intelligent image-activated sorting of Chlamydomonas reinhardtii by mitochondrial localization

description: Data for image-based cell sorting based on complex intracellular morphology taken with an imaging flow cytometer Includes: Flow cytometry images of two strains of microalgae 6-layer CNN model used for real-time cell sorting meta-data for the CNN containing the parameters used for creating the CNN model Validation images of the image-based sorting experiments.
DOI: 10.5281/zenodo.6569959
title: Intelligent image-activated sorting of Chlamydomonas reinhardtii by mitochondrial localization

description: Data for image-based cell sorting based on complex intracellular morphology taken with an imaging flow cytometer Includes: Flow cytometry images of two strains of microalgae 6-layer CNN model used for real-time cell sorting meta-data for the CNN containing the parameters used for creating the CNN model Validation images of the image-based sorting experiments.
DOI: 10.5281/zenodo.6556539
title: Exploring Hierarchy and Dependency of Rules for Consistency Checking Between Code and Model (Evaluation Data)

description: This repository contains the data related to the protocol and results of the evaluation conducted on the HiDeoCR approach.
DOI: 10.5281/zenodo.6556538
title: Exploring Hierarchy and Dependency of Rules for Consistency Checking Between Code and Model (Evaluation Data)

description: This repository contains the data related to the protocol and results of the evaluation conducted on the HiDeoCR approach.
DOI: 10.5517/ccdc.csd.cc1nch5p
title: CCDC 1530382: Experimental Crystal Structure Determination

description: Related Article: Sneh Lata, Ashish Dhir, S.V. Kessar, K.N. Singh, S.K. Kulkarni, Pushpinder Singh|2022|Results in Chemistry|4|100352|doi:10.1016/j.rechem.2022.100352
DOI: 10.5517/ccdc.csd.cc1nch7r
title: CCDC 1530384: Experimental Crystal Structure Determination

description: Related Article: Sneh Lata, Ashish Dhir, S.V. Kessar, K.N. Singh, S.K. Kulkarni, Pushpinder Singh|2022|Results in Chemistry|4|100352|doi:10.1016/j.rechem.2022.100352
DOI: 10.5517/ccdc.csd.cc25wtws
title: CCDC 2022746: Experimental Crystal Structure Determination

description: Related Article: Konstantin Günther, Niklas Grabicki, Beatrice Battistella, Lutz Grubert, Oliver Dumele|2022|J.Am.Chem.Soc.|144|8707|doi:10.1021/jacs.2c02195
description: Related Article: Niklas Grabicki|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28hj1c
title: CCDC 2100282: Experimental Crystal Structure Determination

description: Related Article: Manas Kumar Sahu, Shubham Jaiswal, Sandip Pattanaik, Chidambaram Gunanathan|2022|J.Org.Chem.|87|6695|doi:10.1021/acs.joc.2c00374
DOI: 10.5517/ccdc.csd.cc28hj2d
title: CCDC 2100283: Experimental Crystal Structure Determination

description: Related Article: Manas Kumar Sahu, Shubham Jaiswal, Sandip Pattanaik, Chidambaram Gunanathan|2022|J.Org.Chem.|87|6695|doi:10.1021/acs.joc.2c00374
DOI: 10.5517/ccdc.csd.cc28hj3f
title: CCDC 2100284: Experimental Crystal Structure Determination

description: Related Article: Manas Kumar Sahu, Shubham Jaiswal, Sandip Pattanaik, Chidambaram Gunanathan|2022|J.Org.Chem.|87|6695|doi:10.1021/acs.joc.2c00374
DOI: 10.5517/ccdc.csd.cc28n122
title: CCDC 2104623: Experimental Crystal Structure Determination

description: Related Article: Konstantin Günther, Niklas Grabicki, Beatrice Battistella, Lutz Grubert, Oliver Dumele|2022|J.Am.Chem.Soc.|144|8707|doi:10.1021/jacs.2c02195
DOI: 10.5517/ccdc.csd.cc29gz3w
title: CCDC 2129548: Experimental Crystal Structure Determination

description: Related Article: Konstantin Günther, Niklas Grabicki, Beatrice Battistella, Lutz Grubert, Oliver Dumele|2022|J.Am.Chem.Soc.|144|8707|doi:10.1021/jacs.2c02195
DOI: 10.5517/ccdc.csd.cc2bbp2g
title: CCDC 2155215: Experimental Crystal Structure Determination

description: Related Article: Alexander A. Lukoyanov, Andrey A. Tabolin, Yulia V. Nelyubina, Sema L. Ioffe, Alexey Yu. Sukhorukov|2022|J.Org.Chem.|87|6838|doi:10.1021/acs.joc.2c00515
DOI: 10.5517/ccdc.csd.cc2bbp3h
title: CCDC 2155216: Experimental Crystal Structure Determination

description: Related Article: Alexander A. Lukoyanov, Andrey A. Tabolin, Yulia V. Nelyubina, Sema L. Ioffe, Alexey Yu. Sukhorukov|2022|J.Org.Chem.|87|6838|doi:10.1021/acs.joc.2c00515
DOI: 10.5517/ccdc.csd.cc2bbp4j
title: CCDC 2155217: Experimental Crystal Structure Determination

description: Related Article: Alexander A. Lukoyanov, Andrey A. Tabolin, Yulia V. Nelyubina, Sema L. Ioffe, Alexey Yu. Sukhorukov|2022|J.Org.Chem.|87|6838|doi:10.1021/acs.joc.2c00515
DOI: 10.5517/ccdc.csd.cc2bcdkp
title: CCDC 2155912: Experimental Crystal Structure Determination

description: Related Article: Jie Ouyang, Rajat Maji, Markus Leutzsch, Benjamin Mitschke, Benjamin List|2022|J.Am.Chem.Soc.|144|8460|doi:10.1021/jacs.2c02216