cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20607867.v1
title: Supplemental material

description: The folders contain the raw monochromatic images obtained with the hyperspectral system and reported in the paper. Each set of images is ordered from 420nm to 730nm in 5nm steps. <br> The folder "Optical Signatures (Training Set)" includes all the images used to construct hypercubes and from which ROIs were selected and labelled to create the spectral library used for training. The .txt file "ROIs" inside each one of these folders contains the ROI selected from the original images (cropping step of pre-processing); the .txt file "ROI_MATLAB" contains the rectangular ROIs from which pixels were collected to create the training data set; the .txt file "ROI_labels_MATLAB" contains the respective labels. <br> Similarly, the "Model Target (Test Set)" folder contains the images of the spatially disjoint model target used for test/validation of the model. It also contains the ROIs and respective labels in .txt files used to create the two test datasets (for the fine and coarse classification). This is the hypercube presented in Figure 7. <br> The folder "Calibration" contains the Bright Field and Dark Field images used for pixelwise calibration according to Equation (2), allowing to convert the intensity data to global reflectance. <br> Finally, the raw data for the real targets with biofouling is also included (the corresponding images in the manuscript are disclosed in the filename). <br> <br> <br>
DOI: 10.5281/zenodo.7020250
title: IODP Expedition 352 Core summary

description: Report includes detailed core data: drilling and coring depths, advancement, recovered core length measured on the catwalk and final curated length, core recovery, and sections cut.
DOI: 10.5281/zenodo.7020249
title: IODP Expedition 352 Core summary

description: Report includes detailed core data: drilling and coring depths, advancement, recovered core length measured on the catwalk and final curated length, core recovery, and sections cut.
DOI: 10.5281/zenodo.7020253
title: IODP Expedition 352 Inorganic carbon (coulometer)

description: Inorganic carbon (carbonate) is determined by coulometry, which uses a photodetection cell to measure carbon dioxide evolved during sample acidification. Report includes percent inorganic carbon and calcium carbonate.
DOI: 10.5281/zenodo.7020252
title: IODP Expedition 352 Inorganic carbon (coulometer)

description: Inorganic carbon (carbonate) is determined by coulometry, which uses a photodetection cell to measure carbon dioxide evolved during sample acidification. Report includes percent inorganic carbon and calcium carbonate.
DOI: 10.5281/zenodo.7020255
title: IODP Expedition 352 Micropaleontology

description: Paleontological data were collected using microscopes and recorded in the JRSO description software. All data for a species group (e.g., diatoms or nannofossils) were collected in a Microsoft Excel worksheet by hole. A zip file of the entire expedition's observations is also available.
DOI: 10.5281/zenodo.7020254
title: IODP Expedition 352 Micropaleontology

description: Paleontological data were collected using microscopes and recorded in the JRSO description software. All data for a species group (e.g., diatoms or nannofossils) were collected in a Microsoft Excel worksheet by hole. A zip file of the entire expedition's observations is also available.
DOI: 10.6084/m9.figshare.20538711
title: Figure 2 Circadian gene expressions in BKO cells

description: qPCR CT values for circadian gene expressions in Bmal1 KO cells
DOI: 10.6084/m9.figshare.20538885
title: Figure 3 Cell viability from oxidative stress challenge

description: The cell survival rate following exposure to H2O2 or vehicle control treatment in 661W and BKO cells.
DOI: 10.6084/m9.figshare.20539026
title: Figure 4 A and C data set Nrf2 expression and GPx activity level in 661W and BKO cells

description: Data sets for Nrf2 circadian expression in 661W and BKO cells and circadia variation for GPx activity level
DOI: 10.6084/m9.figshare.20539398
title: Figure 4 B data set Measurement of antioxidant capacity in 661W and BKO cells

description: The spectrometry counts obtained from antioxidant assay in 661W and BKO cells.
DOI: 10.6084/m9.figshare.20539485
title: Figure 5 The survival rate after pretreatment of Lip1 followed by oxidative stress challenge.

description: The survival rate after Lip1 or vehicle treatment in 661W and BKO cells at two time ponts.
DOI: 10.6084/m9.figshare.20539737
title: Figure 6 The cell viability in Bmal1 rescued cells following oxidative stress challenge

description: The data set for the survival rate in Bmal1 rescued cells following oxidative stress challenge.
DOI: 10.6084/m9.figshare.20608263
title: butastur_indicus_zanfona_1.fasta.gz

description: ........
DOI: 10.6084/m9.figshare.20608263.v1
title: butastur_indicus_zanfona_1.fasta.gz

description: ........
DOI: 10.6084/m9.figshare.20608638
title: Flow cytometry data for Figure 7

description: GFP and RFP spore percentages in idndividual experiments used to generate bar charts in Figure 7.
DOI: 10.6084/m9.figshare.20608638.v1
title: Flow cytometry data for Figure 7

description: GFP and RFP spore percentages in idndividual experiments used to generate bar charts in Figure 7.
DOI: 10.5281/zenodo.7020268
title: Como os mantenedores usam GitHub Reactions? Um estudo exploratório

description: Dataset contendo respostas obtidas no estudo "Como os mantenedores usam GitHub Reactions? Um estudo exploratório" aceito para publicação no VEM 2022 (10th Workshop on Software Visualization, Evolution and Maintenance / CBSoft). Resumo: Plataformas de codificação social modernas têm fomentado a comunicação e colaboração no desenvolvimento de software por meio de funcionalidades inspiradas de redes sociais tradicionais. Estudos anteriores mostraram que reactions é uma funcionalidade cada vez mais utilizada, contudo pouco se sabe sobre seu impacto no desenvolvimento de software da perspectiva dos desenvolvedores. Neste trabalho, é apresentado um estudo com 17 mantenedores de pro- jetos populares na plataforma GitHub com intuito de coletar suas percepções sobre tal funcionalidade. Os resultados mostram que a absoluta maioria dos participantes vêem benefícios nas reações (e.g., praticidade de feedaback e métrica de aceitação) e três em cada quatro consideraram as reações ao tomarem decisões de projeto.
DOI: 10.5281/zenodo.7020267
title: Como os mantenedores usam GitHub Reactions? Um estudo exploratório

description: Dataset contendo respostas obtidas no estudo "Como os mantenedores usam GitHub Reactions? Um estudo exploratório" aceito para publicação no VEM 2022 (10th Workshop on Software Visualization, Evolution and Maintenance / CBSoft). Resumo: Plataformas de codificação social modernas têm fomentado a comunicação e colaboração no desenvolvimento de software por meio de funcionalidades inspiradas de redes sociais tradicionais. Estudos anteriores mostraram que reactions é uma funcionalidade cada vez mais utilizada, contudo pouco se sabe sobre seu impacto no desenvolvimento de software da perspectiva dos desenvolvedores. Neste trabalho, é apresentado um estudo com 17 mantenedores de pro- jetos populares na plataforma GitHub com intuito de coletar suas percepções sobre tal funcionalidade. Os resultados mostram que a absoluta maioria dos participantes vêem benefícios nas reações (e.g., praticidade de feedaback e métrica de aceitação) e três em cada quatro consideraram as reações ao tomarem decisões de projeto.
DOI: 10.5281/zenodo.6461587
title: SURE 2.0

description: Surface rupturing data from the historical earthquakes is used for obtaining empirical regression parameters for fault displacement hazard assessment. This is the second version of the SUrface Ruptures due to Earthquake (SURE) database. This new release contains slip measurements and mapped surface rupture traces of 50 surface rupturing earthquakes of reverse, normal, and strike-slip kinematics. As a novelty, a ranking scheme of the rupture features is applied to all the traces and slip measurements in the database. Fault ranking introduces geology as a primary analysis tool and allows the end user to obtain regression parameters suitable for the specific geological conditions at the site of interest. SURE 2.0 dataset consists of a table containing the background information about each earthquake, a table containing the slip measurement data of each event, and a joint shapefile containing all the surface rupture traces of the events in the database.
DOI: 10.5281/zenodo.6461588
title: SURE 2.0

description: CAUTION! THIS IS UNDER REVIEW VERSION OF THE DATABASE SURE 2.0 Surface rupturing data from the historical earthquakes is used for obtaining empirical regression parameters for fault displacement hazard assessment. This is the second version of the SUrface Ruptures due to Earthquake (SURE) database. This new release contains slip measurements and mapped surface rupture traces of 50 surface rupturing earthquakes of reverse, normal, and strike-slip kinematics. As a novelty, a ranking scheme of the rupture features is applied to all the traces and slip measurements in the database. Fault ranking introduces geology as a primary analysis tool and allows the end user to obtain regression parameters suitable for the specific geological conditions at the site of interest. SURE 2.0 dataset consists of a table containing the background information about each earthquake, a table containing the slip measurement data of each event, and a joint shapefile containing all the surface rupture traces of the events in the database.
DOI: 10.5281/zenodo.5072401
title: Data set from: Rates of Compact Object Coalescence

description: <strong>Data from: Rates of Compact Object Coalescence</strong> <strong>Brief overview: </strong><br> This Zenodo entry contains the data that has been used to make the figures for the living review "Rates of Compact Object Coalescence" by Ilya Mandel & Floor Broekgaarden (2021). To reproduce the figures, download all the <strong>*.csv</strong> files and run the jupyter notebook created to reproduce the results in the publicly available Github directory https://github.com/FloorBroekgaarden/Rates_of_Compact_Object_Coalescence (the exact jupyter notebook can be found here) For any suggestions, questions or inquiry, please email one, or both, of the authors: <strong>Ilya Mandel</strong>: <em>ilya.mandel@monash.edu</em> <strong>Floor Broekgaarden</strong>: <em>floor.broekgaarden@cfa.harvard.edu</em> We very much welcome suggestions for additional/missing literature with rate predictions or measurements. <strong>Extra figures:</strong><br> Extra figures that can be used can be found here: <strong>Vertical figures: https://docs.google.com/presentation/d/1GqJ0k2zpnxBGwIYNeQ0BfsLSU7H2942gspL-PN_iaJY/edit?usp=sharing </strong><br> <br> The authors are currently working on making an interactive tool for plotting the rates that will be available soon. In the mean time, feel free to send requests for plots/figures to the authors. <strong>Reference</strong><br> If you use this data/code for publication, please cite both the paper: Mandel & Broekgaarden (in prep. 2021) and the dataset on Zenodo through it's doi (see tabs on the right of this zenodo entry) <br> <br> <strong>Details datafiles: </strong>
DOI: 10.7931/qzf7-9q70
title: Sexual Systems of NZ Angiosperms
DOI: 10.34740/kaggle/dsv/4117045
title: Tales from the Pizza Guy
DOI: 10.5281/zenodo.6596226
title: geometries and output files for CMS-PDFT gradient paper

description: This deposist contains xyz files and input and output files as supporting data for “Analytic Gradients for Compressed Multistate Pair-Density Functional Theory,” by J. J. Bao, M. R. Hermes, T. R. Scott, A. M. Sand, R. Lindh, L. Gagliardi, and D. G. Truhlar, to be published in a special Issue of Molecular Physics dedicated to the memory of Lutosław Wolniewicz.
DOI: 10.5281/zenodo.6596227
title: geometries and output files for CMS-PDFT gradient paper

description: This deposist contains xyz files and input and output files as supporting data for “Analytic Gradients for Compressed Multistate Pair-Density Functional Theory,” by J. J. Bao, M. R. Hermes, T. R. Scott, A. M. Sand, R. Lindh, L. Gagliardi, and D. G. Truhlar, to be published in a special Issue of Molecular Physics dedicated to the memory of Lutosław Wolniewicz.
DOI: 10.5281/zenodo.7020288
title: geometries and output files for CMS-PDFT gradient paper

description: This deposist contains xyz files and input and output files as supporting data for “Analytic Gradients for Compressed Multistate Pair-Density Functional Theory,” by J. J. Bao, M. R. Hermes, T. R. Scott, A. M. Sand, R. Lindh, L. Gagliardi, and D. G. Truhlar, to be published in a special Issue of Molecular Physics dedicated to the memory of Lutosław Wolniewicz.
DOI: 10.6084/m9.figshare.20459879
title: Comprehensive experimental and statistical analysis of the effects of salinity gradient, temperature gradient, air bubbles on the performance of underwater wireless optical communication link

description: Salinity gradients (SGs), temperature gradients (TGs), and different-sized air bubbles affect the optical signal propagating in the UWOC link. These effects contribute to beam wandering, spot dancing, and intensity fluctuations in the received optical signal. In this paper, experimental analysis has been carried out to estimate the effect of SG, TG and air bubbles on the underwater optical signal. The beam wandering, mean and variance deviation, displacement of weighted centroid, the statistical distribution of received intensities and link outage probability have been estimated in this work. It has been found that the beam wandering effects follow a Gaussian mixture model (GMM). It is also observed that in the presence of air bubbles in the SG, the chances of link outage increase from 48% to 80% and it increases from 7% to 28% in the TG conditions. Furthermore, the experimental and theoretical modelled outage probabilities are in close agreement.
DOI: 10.6084/m9.figshare.20609208
title: ExampleData folder for GOThresher

description: Example data to be used for demonstrating GO Threser and checking the installation. <br> See: https://github.com/FriedbergLab/GOThresher for details. <br> <br>
DOI: 10.25574/07783
title: Chandra X-ray Observatory ObsId 7783

description: An Exploratory Chandra Survey of Weak-Line Quasars from the Sloan Digital Sky Survey
DOI: 10.25574/07829
title: Chandra X-ray Observatory ObsId 7829

description: Probing the Disk-Wind Connection in the Seyfert Galaxy NGC 4151
DOI: 10.25574/07830
title: Chandra X-ray Observatory ObsId 7830

description: Probing the Disk-Wind Connection in the Seyfert Galaxy NGC 4151
DOI: 10.25574/07879
title: Chandra X-ray Observatory ObsId 7879

description: The Definitive Chandra Observations of NGC 4258
DOI: 10.25574/07880
title: Chandra X-ray Observatory ObsId 7880

description: The Definitive Chandra Observations of NGC 4258
DOI: 10.25574/07894
title: Chandra X-ray Observatory ObsId 7894

description: Search for strongly obscured AGN: support for INTEGRAL all-sky hard X-ray survey
DOI: 10.5517/ccdc.csd.cc249g31
title: CCDC 1975292: Experimental Crystal Structure Determination

description: Related Article: Sardaraz Khan, Babar Hussain Shah, Can Zhao, Yong Jian Zhang|2022|Org.Biomol.Chem.|20|6532|doi:10.1039/D2OB01156E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc298vs7
title: CCDC 2123679: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc298vv9
title: CCDC 2123681: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc298vwb
title: CCDC 2123682: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc298vzf
title: CCDC 2123685: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc298w0h
title: CCDC 2123686: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc298w2k
title: CCDC 2123688: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc298w3l
title: CCDC 2123689: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc298w5n
title: CCDC 2123691: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc298w6p
title: CCDC 2123692: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcb46
title: CCDC 2155837: Experimental Crystal Structure Determination

description: Related Article: Hang-Ling Zhai, Jin-Le Hou, Chen-Yue Luo, Li-Jun Ma, Qin-Yu Zhu, Jie Dai|2022|Inorg.Chem.|61|13191|doi:10.1021/acs.inorgchem.2c02086
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bdvwh
title: CCDC 2157317: Experimental Crystal Structure Determination

description: Related Article:  Lauren E. Rosch, Matthew R. Crawley, Ryan M. O’Donnell, Thomas N. Rohrabaugh, Trenton R. Ensley, Thomas A. Sobiech, Timothy R. Cook|2022|Organometallics|41|2301|doi:10.1021/acs.organomet.2c00263
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bq4px
title: CCDC 2166239: Experimental Crystal Structure Determination

description: Related Article: Xiaoju Tan, Kun Zhao, Xuefang Zhong, Lan Yang, Yiming Dong, Tianmi Wang, Shengping Yu, Xiaoxiao Li, Zhigang Zhao|2022|Org.Biomol.Chem.|20|6566|doi:10.1039/D2OB00964A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.