cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c58p5vn8h
title: MassIVE MSV000097512 - Protein contaminants in honey 45-sample dataset B
title: Dataset of 59 nanoLC-MS/MS runs on 45 honey samples.
DOI: 10.15468/dl.fqputs
title: Occurrence Download

description: A dataset listing the 53756 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Orchidaceae"
 ]
}

 The dataset's 53756 records were derived from 6106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002414-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2nxytc
title: CCDC 2470694: Experimental Crystal Structure Determination

description: Related Article: Ryosuke Masuda, Kento Ishida, Yuta Fujikura, Kanato Takahashi, Yuki Tanigawa, Yujiro Kato, Hiroyuki Kusama|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c03678
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.17465127
title: Healthful and unhealthful plant-based diets and their associa-tion with cardiometabolic targets in women diagnosed with breast cancer participating in a multicentric lifestyle trial: a cross-sectional analysis.

description: Background Plant-based diets are recommended for the prevention of cancer and cardiometabolic diseases which remain major causes of death in breast cancer survivors (BCS). Since not all plant-foods are healthy, we calculated the plant-based dietary index (PDI), healthy (hPDI) and unhealthy (uPDI), and their associations with cardiometabolic targets in BCS.

Methods Baseline dietary and cardiometabolic data were derived from 492 female BCS participating in a multicentric lifestyle trial conducted in Italy. Dietary data were collected with 7-day food records. PDI, hPDI, and uPDI were calculated by assigning positive scores to all plant foods, healthy plant foods, or less healthy plant foods, respectively, as defined by the literature (scores ranged from 18 to 90). Using logistic or multinomial regression models we estimated the odds ratios (OR) and the corresponding 95% confidence intervals (CI) between PDIs and cardiometabolic risk factors.

Results The OR of being obese (BMI≥30Kg/m2) was 0.47 (95%CI: 0.29-0.77), 0.37 (95%CI: 0.22-0.61) and 1.38 (95%CI: 0.83-2.28) with higher PDI, hPDI and uPDI, respectively. The OR of having a large waist circumference (≥ 88cm) was 0.64 (95%CI: 0.42-1.00) with higher hPDI. The OR for hypercholesterolemia (≥200mg/dL) was 1.80 (95%CI: 1.16-2.78) with higher uPDI. The ORs of hypertriglyceridemia (≥150mg/dL) and metabolic syndrome were 0.38 (95%CI: 0.20-0.71) and 0.59 (95%CI: 0.35-0.97), respectively, with higher PDI. No other significant associations were observed. 

Conclusions Maintaining cardiometabolic risk factors within normal ranges is clinically relevant in BCS and this may be more likely when a plant-based diet is consumed especially if low in unhealthy plant foods.
DOI: 10.5281/zenodo.17465126
title: Healthful and unhealthful plant-based diets and their associa-tion with cardiometabolic targets in women diagnosed with breast cancer participating in a multicentric lifestyle trial: a cross-sectional analysis.

description: Background Plant-based diets are recommended for the prevention of cancer and cardiometabolic diseases which remain major causes of death in breast cancer survivors (BCS). Since not all plant-foods are healthy, we calculated the plant-based dietary index (PDI), healthy (hPDI) and unhealthy (uPDI), and their associations with cardiometabolic targets in BCS.

Methods Baseline dietary and cardiometabolic data were derived from 492 female BCS participating in a multicentric lifestyle trial conducted in Italy. Dietary data were collected with 7-day food records. PDI, hPDI, and uPDI were calculated by assigning positive scores to all plant foods, healthy plant foods, or less healthy plant foods, respectively, as defined by the literature (scores ranged from 18 to 90). Using logistic or multinomial regression models we estimated the odds ratios (OR) and the corresponding 95% confidence intervals (CI) between PDIs and cardiometabolic risk factors.

Results The OR of being obese (BMI≥30Kg/m2) was 0.47 (95%CI: 0.29-0.77), 0.37 (95%CI: 0.22-0.61) and 1.38 (95%CI: 0.83-2.28) with higher PDI, hPDI and uPDI, respectively. The OR of having a large waist circumference (≥ 88cm) was 0.64 (95%CI: 0.42-1.00) with higher hPDI. The OR for hypercholesterolemia (≥200mg/dL) was 1.80 (95%CI: 1.16-2.78) with higher uPDI. The ORs of hypertriglyceridemia (≥150mg/dL) and metabolic syndrome were 0.38 (95%CI: 0.20-0.71) and 0.59 (95%CI: 0.35-0.97), respectively, with higher PDI. No other significant associations were observed. 

Conclusions Maintaining cardiometabolic risk factors within normal ranges is clinically relevant in BCS and this may be more likely when a plant-based diet is consumed especially if low in unhealthy plant foods.
DOI: 10.5517/ccdc.csd.cc2nyfmp
title: CCDC 2471153: Experimental Crystal Structure Determination

description: Related Article: David P. Hales, Erik T. Ouellette, Robert G. Bergman, John Arnold|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03552
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nyfnq
title: CCDC 2471154: Experimental Crystal Structure Determination

description: Related Article: David P. Hales, Erik T. Ouellette, Robert G. Bergman, John Arnold|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03552
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nyfpr
title: CCDC 2471155: Experimental Crystal Structure Determination

description: Related Article: David P. Hales, Erik T. Ouellette, Robert G. Bergman, John Arnold|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03552
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nyfqs
title: CCDC 2471156: Experimental Crystal Structure Determination

description: Related Article: David P. Hales, Erik T. Ouellette, Robert G. Bergman, John Arnold|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03552
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nyfrt
title: CCDC 2471157: Experimental Crystal Structure Determination

description: Related Article: David P. Hales, Erik T. Ouellette, Robert G. Bergman, John Arnold|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03552
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nyfsv
title: CCDC 2471158: Experimental Crystal Structure Determination

description: Related Article: David P. Hales, Erik T. Ouellette, Robert G. Bergman, John Arnold|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03552
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nyftw
title: CCDC 2471159: Experimental Crystal Structure Determination

description: Related Article: David P. Hales, Erik T. Ouellette, Robert G. Bergman, John Arnold|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03552
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nyfvx
title: CCDC 2471160: Experimental Crystal Structure Determination

description: Related Article: David P. Hales, Erik T. Ouellette, Robert G. Bergman, John Arnold|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c03552
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2p1fpw
title: CCDC 2474038: Experimental Crystal Structure Determination

description: Related Article: Penghui Ni, Jing Tan, Jiazhao Duan, Yuxing Tan, Wujiu Jiang|2026|J.Mol.Struct.|1351||doi:10.1016/j.molstruc.2025.144220
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2p1fqx
title: CCDC 2474039: Experimental Crystal Structure Determination

description: Related Article: Penghui Ni, Jing Tan, Jiazhao Duan, Yuxing Tan, Wujiu Jiang|2026|J.Mol.Struct.|1351||doi:10.1016/j.molstruc.2025.144220
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2p26cc
title: CCDC 2474772: Experimental Crystal Structure Determination

description: Related Article: Hengxu Li, Mingjie Fan, Qiang Liu|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c13113
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2p26dd
title: CCDC 2474773: Experimental Crystal Structure Determination

description: Related Article: Hengxu Li, Mingjie Fan, Qiang Liu|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c13113
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2p26ff
title: CCDC 2474774: Experimental Crystal Structure Determination

description: Related Article: Hengxu Li, Mingjie Fan, Qiang Liu|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c13113
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2p26gg
title: CCDC 2474775: Experimental Crystal Structure Determination

description: Related Article: Hengxu Li, Mingjie Fan, Qiang Liu|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c13113
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.22cekz
title: Occurrence Download

description: A dataset listing the 289 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-122.91766 54.63844,-122.59841 54.63844,-122.59841 54.80192,-122.91766 54.80192,-122.91766 54.63844))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 289 records were derived from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019545-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v45s24
title: Occurrence Download

description: A dataset listing the 14 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-73.38361 6.92045,-73.5137 6.86339,-73.58631 6.75224,-73.65286 6.63506,-73.68312 6.4938,-73.65589 6.37054,-73.61353 6.23823,-73.46832 6.2232,-73.33823 6.28635,-73.28075 6.41263,-73.2505 6.58397,-73.24445 6.74323,-73.23537 6.86639,-73.28075 6.93247,-73.38361 6.92045))",
 "HasGeospatialIssue is false",
 "TaxonKey is Carnivora"
 ]
}

 The dataset's 14 records were derived from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019548-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sq8jws
title: Occurrence Download

description: A dataset containing 32594 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Ulex gallii Planch.)"
 ]
}

 The dataset includes 32594 records from 270 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019550-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15061699
title: Expression of Secretory Recombinant Bovine Lactoferrin in Pichia pastoris with Enhanced Activity and Thermostability for Food Application
DOI: 10.5281/zenodo.15061700
title: Expression of Secretory Recombinant Bovine Lactoferrin in Pichia pastoris with Enhanced Activity and Thermostability for Food Application
DOI: 10.15468/dl.wp4qcm
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eurytoma verticillata (Fabricius, 1798)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019552-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.seaawy
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lepidoptera",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is true",
 "EventDate is greater than or equal to 2020-01-01",
 "EventDate is less than or equal to 2024-12-31",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 279 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019551-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5x05xr19
title: MassIVE MSV000097391 - Macro_NN_2025_Pro-cognitive reshaping of neuronal dynamics by a human CSF-based factor
title: Neuronal connection dysfunction is a convergent cause of cognitive deficits in mental disorders. Cognitive processes are finely regulated at the synaptic level by membrane proteins, some of which are shed and detectable in patients' cerebrospinal fluid (CSF). However, whether these soluble synaptic proteins can harnessed as innovative pro-cognitive factors to treat brain disorders remains unclear. Here, we use quantitative proteomics to identify shed synaptic proteins dysregulated in the CSF of subjects with schizophrenia (SCZ), a mental disorder characterized by cognitive and synaptic dysfunction. The level of a yet uncharacterized soluble form of the voltage-gated calcium channel auxiliary subunit, alpha2delta-1, is robustly reduced in SCZ CSF. Remarkably, soluble alpha2delta-1 is convergently downregulated across several brain disorder CSF proteomes. We show that the brain releases soluble alpha2delta-1 in an activity-dependent manner, which can reorganize neuronal network dynamics by binding to synaptic targets and promoting inhibitory neuron plasticity. A single brain injection of a synthetic soluble alpha2delta-1 improved interneuron and cognitive deficits in a mutant mouse model of SCZ and cortical dysfunction. These findings underscore the potential of shed synaptic proteins as novel therapeutic agents capable of enhancing brain function in diverse brain disorders characterized by cognitive impairment.
DOI: 10.15468/dl.up6zm2
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-138.50608 59.41811,-128.3166 59.41811,-128.3166 62.33359,-138.50608 62.33359,-138.50608 59.41811))",
 "TaxonKey is Simulium silvestre (Rubtsov, 1956)"
 ]
}

 The dataset includes 18 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019553-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hsg2ej
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lepidoptera",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is true",
 "EventDate is greater than or equal to 2020-01-01",
 "EventDate is less than or equal to 2024-12-31",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 279 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019554-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28636127
title: Tm-edited DEER echo curves and Python fitting scripts for the paper entitled: "Measurement of an electron–methyl proton probability distance distribution in a protein using <i>T</i><sub>m</sub>-edited double electron-electron resonance EPR spectroscopy"

description: This deposition contains the full Tm-edited DEER dataset together with Python scripts for global fitting and analysis.Abstract of the paper: Pulsed double electron-electron resonance (DEER) EPR spectroscopy yields electron-electron distance probability distributions, P(ree), between the unpaired electrons of two paramagnetic spin labels. Here we show that phase memory time (Tm)-edited DEER can be used to measure electron-proton distance distributions in a methyl protonated, otherwise fully deuterated, protein spin-labeled with the rigid R1p nitroxide sidechain. This approach takes advantage of distance dependent nuclear spin-driven electron spin decoherence arising from intramolecular dipolar couplings between the unpaired electron on the spin label and neighboring (&lt; 12 Å) methyl protons. Proof of principle is demonstrated using Staphylococus protein A in which one of the two nitroxide spin labels occupies two distinct regions of conformational space resulting in a bimodal electron-electron P(ree) distribution. One of the conformers is packed against the protein in close proximity to methyl protons while the other conformer is solvent exposed and far away (&gt; 14 Å) from methyl protons. The dependence of the ratio of the intensities of the two peaks in the P(ree) distribution on the total evolution time T of the second echo period of the DEER experiment displays oscillations arising from dipolar electron-methyl proton couplings that can be described and analyzed using the same formalism as that used for determining electron-electron P(ree) distributions from DEER echo curves. Global fitting of a series of DEER echo curves acquired over a range of evolution times T allows one to extract an electron-methyl proton probability distance distribution, P(reH).
DOI: 10.15468/dl.wztj9d
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euscelis obsoleta (Kirschbaum, 1858)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019555-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ttt92
title: Occurrence Download

description: A dataset containing 39017 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pachydiplax longipennis (Burmeister, 1839)",
 "Year 1990-2020"
 ]
}

 The dataset includes 39017 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019556-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ppwzj
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-117.42117 43.67298,-103.86773 43.67298,-103.86773 49.31718,-117.42117 49.31718,-117.42117 43.67298))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Centrocercus urophasianus urophasianus"
 ]
}

 The dataset includes 65 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019557-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.