cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16960628.v1
title: Additional file 2 of Genome-wide survey and identification of AP2/ERF genes involved in shoot and leaf development in Liriodendron chinense

description: Additional file 2: Table S2. List of primer sequences in this study.
DOI: 10.6084/m9.figshare.14456723
title: Additional file 2 of Additional evidence on the efficacy of different Akirin vaccines assessed on Anopheles arabiensis (Diptera: Culicidae)

description: Additional file 2. Fecundity and fertility dataset.
DOI: 10.6084/m9.figshare.14456723.v1
title: Additional file 2 of Additional evidence on the efficacy of different Akirin vaccines assessed on Anopheles arabiensis (Diptera: Culicidae)

description: Additional file 2. Fecundity and fertility dataset.
DOI: 10.6084/m9.figshare.14456726
title: Additional file 3 of Additional evidence on the efficacy of different Akirin vaccines assessed on Anopheles arabiensis (Diptera: Culicidae)

description: Additional file 3. Calculation for vaccine efficacy.
DOI: 10.6084/m9.figshare.14456726.v1
title: Additional file 3 of Additional evidence on the efficacy of different Akirin vaccines assessed on Anopheles arabiensis (Diptera: Culicidae)

description: Additional file 3. Calculation for vaccine efficacy.
DOI: 10.6084/m9.figshare.14456729
title: Additional file 4 of Additional evidence on the efficacy of different Akirin vaccines assessed on Anopheles arabiensis (Diptera: Culicidae)

description: Additional file 4. Overall vaccine efficacy.
DOI: 10.6084/m9.figshare.14456729.v1
title: Additional file 4 of Additional evidence on the efficacy of different Akirin vaccines assessed on Anopheles arabiensis (Diptera: Culicidae)

description: Additional file 4. Overall vaccine efficacy.
DOI: 10.6084/m9.figshare.16960624
title: Additional file 1 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 1 Table S1-S2. Annotation and sequence data of LT and MV longest transcript for each gene cluster.
DOI: 10.6084/m9.figshare.16960624.v1
title: Additional file 1 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 1 Table S1-S2. Annotation and sequence data of LT and MV longest transcript for each gene cluster.
DOI: 10.6084/m9.figshare.16960630
title: Additional file 2 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 2 Table S3-S6. Annotation of upregulated transcripts in MRT and haemolymph (as compared to whole body) of LT and MV (FDR 2).
DOI: 10.6084/m9.figshare.16960630.v1
title: Additional file 2 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 2 Table S3-S6. Annotation of upregulated transcripts in MRT and haemolymph (as compared to whole body) of LT and MV (FDR 2).
DOI: 10.6084/m9.figshare.16960633
title: Additional file 3 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 3 Table S7-S10. Complete list of significantly (adj. p
DOI: 10.6084/m9.figshare.16960633.v1
title: Additional file 3 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 3 Table S7-S10. Complete list of significantly (adj. p
DOI: 10.6084/m9.figshare.16960636
title: Additional file 4 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 4 Table S11-S14. Complete list of significantly (adj. p
DOI: 10.6084/m9.figshare.16960636.v1
title: Additional file 4 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 4 Table S11-S14. Complete list of significantly (adj. p
DOI: 10.6084/m9.figshare.16960639
title: Additional file 5 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 5 Table S15-S16. Expression data (FPKM) and complete list of transcripts putatively involved in CA biosynthesis pathways and sequestration/self-detoxification mechanisms in LT and MV.
DOI: 10.6084/m9.figshare.16960639.v1
title: Additional file 5 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 5 Table S15-S16. Expression data (FPKM) and complete list of transcripts putatively involved in CA biosynthesis pathways and sequestration/self-detoxification mechanisms in LT and MV.
DOI: 10.6084/m9.figshare.16960642
title: Additional file 6 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 6 Table S17. List of primers used for RT-qPCR validation.
DOI: 10.6084/m9.figshare.16960642.v1
title: Additional file 6 of Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

description: Additional file 6 Table S17. List of primers used for RT-qPCR validation.
DOI: 10.6084/m9.figshare.16960207
title: KNOWLEDGE ABOUT KITCHEN HYGIENE AND ASSOCIATED FACTORS

description: This is a cross-sectional study. We interviewed 250 mothers at <i>Comedores Populares </i>(a sort of community kitchens which are very popular in Lima) and who belonged to mothers' clubs in the areas of Huascar V and San Pablo, in San Juan de Lurigancho (SJL) in Lima. The sample was selected through non-probability convenience sampling. A questionnaire with three dimensions (cleanliness, storage and contamination of children) was administered. <br>
DOI: 10.6084/m9.figshare.16944643
title: Parameters used for Antibiotic Footprint Individual Calculator

description: This data set is for antibiotic footprint individual calculator (www.antibioticfootprint.net/calculator) <br>This data set is mainly to explain how we estimate individual ‘Antibiotic Footprint’ (gram per person per year)? To estimate individual antibiotic footprint <b>“from taking antibiotics”</b>, we use the number of days from an answer to the question “On how many days did you take oral antibiotics in the past 12 months”. We estimate the total grams of oral antibiotics that you directly consumed in the past 12 months by multiplying “the number of days you took oral antibiotics in the past 12 months” by “the amount of grams of antibiotics that a person in your country normally would consume per day when taking a course of antibiotics”. The latter parameter was estimated from official and open-access data published by your country (references are available at www.antibioticfootprint.net) and are available as a variable human_g_p_day here To estimate individual antibiotic footprint <b>“from eating meat”</b>, we use the kilograms of meat that a person consumed in the past 12 months from the answers in the quiz. We estimate the total grams of antibiotics used to produce meat for your consumption in the past 12 months by multiplying “the kilograms” by “the milligrams of antibiotics used per kilogram Population Correction Unit (PCU) of animal meat (i.e. mg/PCU)”. The latter parameter was obtained from official and open-access data published by your country (references are available at www.antibioticfootprint.net) and are available as a variable mg_p_PCU here. For countries without official and open-access data, we assume that parameters of those countries are equal to the average of those parameters from countries with official and open-access data and within similar regions and closest income levels. For South Asia, we used data from countries with similar income levels of East Asia & Pacific, because all countries in South Asia do not have official and open-access data to estimate this parameter.<br>
DOI: 10.5281/zenodo.5655738
title: Data for 'Membrane marker selection for segmenting single cell spatial proteomics data'

description: Additional data for 'Membrane marker selection for segmenting single cell spatial proteomics data'
DOI: 10.5281/zenodo.5655737
title: Data for 'Membrane marker selection for segmenting single cell spatial proteomics data'

description: Additional data for 'Membrane marker selection for segmenting single cell spatial proteomics data'
DOI: 10.18112/openneuro.ds003872.v1.0.0
title: The Reading Brain Project L2 Adults
DOI: 10.6084/m9.figshare.16917451.v2
title: Phosphorus in China's forests

description: This dataset contains phosphorus content and concentration data supporting the results in the paper accepted in Global Change Biology ("Natural forests promote phosphorus retention in soil").
DOI: 10.34740/kaggle/dsv/2790819
title: Contrastive Language Image Pretraining by openai
DOI: 10.5281/zenodo.5655855
title: Supplementary Data and Codes for "Machine Learning Based Long-term Water Quality in the Turbid Pearl River Estuary, China"

description: The file "Ma_AGUSupplementary.xlsx" contains the in situ data used to develop the ANN model. The files "example_Chla.zip" and "example_TSS.zip" contain codes for retrieving the concentration of Chl-a and TSS on the sea surface of the Pearl River Estuary.
DOI: 10.5281/zenodo.5524082
title: Supplementary Data and Codes for "Machine Learning Based Long-term Water Quality in the Turbid Pearl River Estuary, China"

description: The file "Ma_AGUSupplementary.xlsx" contains the in situ data used to develop the ANN model. The files "example_Chla.zip" and "example_TSS.zip" contain codes for retrieving the concentration of Chl-a and TSS on the sea surface of the Pearl River Estuary.
DOI: 10.5281/zenodo.5638520
title: NGS datasets for "Paired nicking-mediated gene reframing for junctional epidermolysis bullosa"

description: Illumina MiSeq PE250 Nano data for treated immortalized and primary keratinocytes (n=3 each) as well as off-target data for sgRNA 5' and sgRNA 3'.
DOI: 10.26180/5e8bf494b16a6
title: Silva Soares et al: Rapid diversification of the larval mouthparts in Drosophila pest species

description: This is the dataset and scripts for the manuscript on Rapid diversification of the larval mouthparts in Drosophila pest species (Nuno F. Silva-Soares, Matthew McGee, Patrícia Beldade, Christen Kerry Mirth)
DOI: 10.5281/zenodo.5655535
title: Data and code from "Full bandwidth electrophysiology of seizures and epileptiform activity enabled by flexible graphene micro-transistor depth neural probes"

description: Data and python code for reproducing the main results of the paper "Full bandwidth electrophysiology of seizures and epileptiform activity enabled by flexible graphene micro-transistor depth neural probes."
DOI: 10.5281/zenodo.5655534
title: Data and code from "Full bandwidth electrophysiology of seizures and epileptiform activity enabled by flexible graphene micro-transistor depth neural probes"

description: Data and python code for reproducing the main results of the paper "Full bandwidth electrophysiology of seizures and epileptiform activity enabled by flexible graphene micro-transistor depth neural probes."
DOI: 10.6084/m9.figshare.16960804
title: Scientific Data paper

description: Gene expression matrix of different developmental stages of tissues or individuals in lotus for the Scientific Data paper
DOI: 10.15151/esrf-es-541045373
title: Macromolecular crystallography at the Philipps University Marburg (MarBAG)

description: Located at the Philipps-University-Marburg and the Max-Planck-Institute for terrestrial Microbiology in Marburg, Germany, the MarBAG employs X-ray crystallography to answer fundamental questions involving synthesis and assembly of macromolecular machines and cellular structures (e.g. CO2-fixation pathways, flagellar biosynthesis, CRISPR-Cas Systems, cell-wall-related processes). Our analysis of the structural basis of CO2 fixation and the synthesis of the green-house gas methane will help to engineer these processes as tools in climate control. Furthermore, we are interested in plant-pathogen interactions and the function of nucleotide derived signalling molecules in cellular stress physiology and organization. Currently, a 200 keV cryo-electron microscope is being installed at the UMR to complement our efforts to structurally characterize macromolecular complexes, which do not readily crystallize.
DOI: 10.15151/esrf-es-541095634
title: IBS BAG

description: The IBS BAG currently includes 24 IBS teams and 4 external groups from CERMAV and iRTSV/CEA (Grenoble), CEA-Cadarache (St Paul lez Durance) and IRBA (Brétigny-sur-Orge). We study structure-function relationships of proteins emphasizing in human health, biotechnology and methodology. Most of the projects can be grouped in different topics as follows: host-pathogen interaction, immunology, new drug targets, fundamental cellular mechanisms, membrane proteins, intrinsically disordered proteins, biotechnological applications and methodology. Some of these projects use integrative approaches (X-ray crystallography, SAXS, NMR (and cryo-EM), together with other biophysical studies) with the aim to fully understand the complexity of the biological macromolecular systems on study. Some other teams are dedicated to serial crystallography and its developments, for which the new ESRF-EBS might be the perfect tool.
DOI: 10.15151/esrf-es-541419524
title: NORWAY BAG

description: The fifteen PIs associated to this proposal represent the entire crystallography community in Norway and are affiliated to the major Norwegian universities. The research interests of the PIs and their collaborators revolves around topics linked to structural biology and material sciences. We apply for beam time for single- and multi-wavelength MX, Bio-SAXS and Cryo-EM, in support of our research projects funded e.g. by the Research Council of Norway and the ERC. Examples of research projects or topics are carbohydrate-active proteins of medical or bioeconomic relevance, inhibition of DNA repair enzymes, metalloprotein function and catalysis, regulation of cell-cycle processes, enzyme discovery, antibiotic resistance/drug-discovery and neurological diseases. Our overarching aim is to use bright synchrotron sources to produce high quality science.
DOI: 10.15151/esrf-es-601671759
title: Mapping Cd in wood samples from Cacao plants

description: The new regulations of EU for Cd content in Cacao is provoking a review of the Cd distribution and speciation in cacao plant tissues in search of agricultural practices that can help decrease Cd content in cacao beans. We will study in this case the wood tissues of cacao in order to confirm the link of Cd to Ca oxalate crystal commonly present in the wood tissues. We have LA-ICP-
DOI: 10.15151/esrf-es-616804549
title: continuation of ihch1575

description: continuation
DOI: 10.15151/esrf-es-552739139
title: Luminescent Copper Clusters Under Pressure

description: We are interested to study structural modifications in single crystals of the luminescent compound [Cu4(PCP) 3]+ BF4- using high-pressure X-ray diffraction (HP XRD), eventually aiming to correlate the alteration of the photoluminescent properties of the cluster with the structure evolution under mechanical stress. We anticipate that pressure may significantly change or enhance luminescent properties of the studied compound as the Cu···Cu intramolecular distance is one of the shortest ever reported. The further contraction has the potential to develop new optical properties of this compound, as it has been already demonstrated for some noble-metal complexes.
DOI: 10.15151/esrf-es-611377150
title: Test of Ximea detector and test imaging of high pressure frozen tissue

description: Test imaging and new scintillator with new large sensor Ximea camera. Test imaging of vitrified mouse brain prepared with high pressure freezing.
DOI: 10.15151/esrf-es-550197419
title: Probing phase transitions in ferroelectric domain walls with x-ray diffraction

description: Ferroelectric domain walls have been at the forefront of scientific research due to their novel properties that are often different from the bulk material. Domain walls were originally believed to have zero polarisation at their centre, but theoretical predictions have shown that they exhibit complex polarisation patterns with unique phase transitions that are distinct from the bulk material. We are studying a phase in tensile-strained ferroelectric thin films in which domain walls are aligned along one crystallographic direction when deposited on an orthorhombic substrate. We propose a study in which we take advantage of these macroscopically-aligned domain wall arrays to probe phase transitions within the domain walls themselves as a function of temperature.
DOI: 10.15151/esrf-es-550197754
title: Studying non-reversible charge-transfer phase transition with time-resolved powder serial crystallography

description: We propose to develop time-resolved serial crystallography on powder to study ultrafast and non-reversible photoinduced charge-transfer transition in Prussian blue analogues nanocrystals. A previous experiment at ID09 revealed the complete phase switching within the thermal hysteresis, with volume and symmetry change towards a stable phase, precluding so usual pump-probe studies. A second experiment [CH-5458] revealed anisotropic lattice dynamics driven by photoinduced CT small-polarons. Here we propose to develop time-resolved serial crystallography for studying non-reversible processes by using a fresh powder sample for every laser shot. This will allow studying the global out-of-equilibrium dynamics, from the formation of CT small-polarons, to cooperative and macroscopic phase nucleation. Both processes involve volume expansion and symmetry change, fully characterized by shifts of the Bragg peaks, and which have to be probed by X-ray diffraction.
DOI: 10.15151/esrf-es-550198636
title: 3D characterization of internal fatigue cracks initiation and propagation in a Ti alloy during gigacycle fatigue

description: When submitted to a very large number of mechanical cycles (~ 1e9 cycles) at very low load levels, structural components generally fail because of the apparition of internal fatigue cracks. Experimental data on their growth rate is scarce but X-ray tomography appears to be the adequate technique to detect their initiation and to follow their propagation in metals. For that reason, a new in situ ultrasonic fatigue machine has been developed to detect and monitor the evolution of internal cracks in a cast-aluminum thanks to X-ray microtomography and infrared thermography. However, because of the material large grain size, the observed fatigue cracks possessed complex 3D shapes which were extremely challenging to model. Consequently, because this type of experiment remains the only one that can provide reliable experimental data on internal fatigue crack propagation, this proposal aims at using the same setup on Ti alloy specimens with a larger grain size to obtain smoother crack fronts.
DOI: 10.15151/esrf-es-550201042
title: Revealing pressure-driven self-doping of polarons in magnetite

description: Magnetite (Fe3O4) is one of the most fascinating quantum materials exhibiting the enigmatic first-order Verwey transition. This transition manifests itself in an abrupt change in electrical conductivity and in the nature of the trimeron correlations (linear three-Fe-site units) from long- to short-range. We recently discovered that heating Fe3O4 above ~400 K results in a cation reordering and consequently a hole self-doping effect which alters short-range correlations at the octahedral sublattice. Strikingly, four regimes of self-doping can be identified that map the temperature depenendence electrical conductivity and magnetism up to the Curie temperature providing an elegant descriptor of correlations. Here we propose to investigate the effect of pressure on cation ordering and short-range correlations in Fe3O4 using Fe Kedge HERFD-XAS in search of a pressure-driven self-doping effect.
DOI: 10.15151/esrf-es-550208321
title: High-resolution RIXS study of the relation between acoustic plasmons and superconductivity in cuprates

description: Despite more than 30 years of intense research on high-Tc superconducting cuprates, a comprehensive understanding of the mechanisms that lead to their exceptionally strong superconductivity has remained elusive. Using Cu L3-edge resonant inelastic x-ray scattering (RIXS), three-dimensional collective charge excitations were revealed in electron-doped cuprates, which subsequently were also observed in hole-doped cuprates by O K-edge RIXS. Interestingly, these collective excitations correspond to the long-anticipated acoustic plasmon modes of cuprates, which were suggested to contribute to the mediation of superconducting pairing, and their evolution across Tc could reflect a possible saving of kinetic energy correlated with the superconducting transition. Here we propose an O K-edge RIXS study on the hole-doped cuprate YBa2Cu3O7 to investigate the behavior of acoustic plasmons above and below the superconducting transition and a possible relation to the elevated Tc of cuprates.
DOI: 10.15151/esrf-es-551397497
title: Investigation of the local structural changes in GeSe2 glass under ultrahigh pressure

description: Experimental data regarding the relationship between the density and local structural changes in the simple network forming glass under ultrahigh pressures has long been desired. Such an information is essential for understanding the further densification mechanism of network structures after the primary low to high density amorphous-amorphous transformation which is generally associated with a tetrahedral to octahedral coordination crossover. We propose to investigate the local structural changes in a particular model system: GeSe2 glass, under ultrahigh pressures using the double edge EXAFS refinements. We aim to obtain reliable quantitative data that is necessary to further understanding of the behavior of similar simple network forming glasses under ultra-high pressures.The proposed research will have strong interdisciplinary implications including the studies of density and local structural changes in the silicate melts under extreme pressure conditions of the deep Earth.
DOI: 10.5519/qd.vetu7u84
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4 records)
DOI: 10.6084/m9.figshare.16960810
title: The Behavioral Patterns of Surabaya Millennial Workers Facing New Normalities Amid the COVID-19 Pandemic and Their HR Development

description: Raw data of Behavioral Patterns of Surabaya Millennial Workers Facing New Normalities Amid the COVID-19 Pandemic and Their HR Development
DOI: 10.6084/m9.figshare.16960810.v1
title: The Behavioral Patterns of Surabaya Millennial Workers Facing New Normalities Amid the COVID-19 Pandemic and Their HR Development

description: Raw data of Behavioral Patterns of Surabaya Millennial Workers Facing New Normalities Amid the COVID-19 Pandemic and Their HR Development