cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14325598
title: Tide assessment for the continental shelf situated in the southwestern Atlantic between the latitudes 19.8ºS and 21.2ºS

description: Abstract The astronomical tide was numerically simulated by the MOHID model for the South-Central Region of Espírito Santo State (Brazil), between latitudes 19.8ºS and 21.2ºS. The grid nesting technique was used to transpose the boundary conditions from the larger domain to a more refined local domain (spatial resolution around 450 m), with tidal harmonics provided by the TPXO tide inverse model as boundary conditions for the larger domain. Results from the numerical model were compared with both the pre-existing tide harmonics and the harmonics calculated from measured data. From the maps of phase, amplitude, tidal ellipses and residual currents the main tidal kinematic characteristics in the study area were described. On the continental shelf, the results showed that the physiography and bathymetry of the region play an important role in the distribution of tidal co-phases, co-amplitudes, ellipses and residual currents. The MOHID model was able to reproduce satisfactorily the astronomical tide and thus can be used to study the behaviour of the tidal propagation in continental shelf areas.
DOI: 10.6084/m9.figshare.14325600.v1
title: Spatial variability in the icthyoplankton structure of a subtropicalhypersaline lagoon

description: Abstract The Lagoa de Araruama is a hypersaline ecosystem inhabited by distinct fish species, either permanently or during their reproductive season. Over recent years, some significant environmental changes have been observed in this ecosystem related to the sewage runoff, as salinity decrease (from 64 to 41 psu during the last 40 years) and nutrients increase. As both changes are thought to affect the ichthyoplankton assemblage, the present study aimed to evaluate all the potential relationships between salinity disruption and fish larvae distribution. Ichtyoplankton samples were collected monthly from January 2010 to March 2011 at eight sites in Araruama Lagoon by means of a WP2 plankton net equipped with a flowmeter. During this period, low egg densities were coincident with high salinity regions, suggesting that adults are avoiding to release their eggs under less favorable environmental conditions to the larvae. The uneven distribution of eggs and larvae inside the lagoon, as revealed by both spatial and temporal analyses lead us to suggest that changes in salinity have influenced the reproductive rhythms of those fish species that depend upon the Lagoa de Araruama.
DOI: 10.6084/m9.figshare.14325503
title: 2016.sav

description: CIS 2016 post-electoral survey
DOI: 10.6084/m9.figshare.14325600
title: Spatial variability in the icthyoplankton structure of a subtropicalhypersaline lagoon

description: Abstract The Lagoa de Araruama is a hypersaline ecosystem inhabited by distinct fish species, either permanently or during their reproductive season. Over recent years, some significant environmental changes have been observed in this ecosystem related to the sewage runoff, as salinity decrease (from 64 to 41 psu during the last 40 years) and nutrients increase. As both changes are thought to affect the ichthyoplankton assemblage, the present study aimed to evaluate all the potential relationships between salinity disruption and fish larvae distribution. Ichtyoplankton samples were collected monthly from January 2010 to March 2011 at eight sites in Araruama Lagoon by means of a WP2 plankton net equipped with a flowmeter. During this period, low egg densities were coincident with high salinity regions, suggesting that adults are avoiding to release their eggs under less favorable environmental conditions to the larvae. The uneven distribution of eggs and larvae inside the lagoon, as revealed by both spatial and temporal analyses lead us to suggest that changes in salinity have influenced the reproductive rhythms of those fish species that depend upon the Lagoa de Araruama.
DOI: 10.6084/m9.figshare.14325601
title: Ecomorphology of crabs and swimming crabs (Crustacea DecapodaBrachyura) from coastal ecosystems

description: Abstract Brachyuran crabs are one of the most diverse taxa of crustaceans, occurring in almost all coastal habitats. Due to their high morphological diversification, the authors sought to ascertain the existence of morphological patterns related to the habitat of coastal brachyuran crabs. We analyzed 17 species from mangrove forests, rocky shores, sandy beaches and exclusively aquatic marine/estuarine ecosystems. A total of 16 linear measurements of males and 17 of females were obtained for each habitat. We were able to discriminate three functional groups of crab species, based on their habitat: 1. Complex Substrates, 2. Semiterrestrial, 3. Exclusively Aquatic. The species belonging to the Complex Substrates group had long ambulatory legs, as well as being heteroquely related to uneven terrain. Semiterrestrial species showed ambulatory legs of different sizes, allowing them to walk easily on the terrestrial terrain due to the long fourth ambulatory leg, and long eyestalks which are important for visual communication. Exclusively Aquatic species showed the largest carapace widths and the shortest eyestalks. The presence of different crab lineages in the environments analyzed allows us to demonstrate the clear evolutionary convergence, by which the crabs adapted to their specific habitat and environment.
DOI: 10.6084/m9.figshare.14325601.v1
title: Ecomorphology of crabs and swimming crabs (Crustacea DecapodaBrachyura) from coastal ecosystems

description: Abstract Brachyuran crabs are one of the most diverse taxa of crustaceans, occurring in almost all coastal habitats. Due to their high morphological diversification, the authors sought to ascertain the existence of morphological patterns related to the habitat of coastal brachyuran crabs. We analyzed 17 species from mangrove forests, rocky shores, sandy beaches and exclusively aquatic marine/estuarine ecosystems. A total of 16 linear measurements of males and 17 of females were obtained for each habitat. We were able to discriminate three functional groups of crab species, based on their habitat: 1. Complex Substrates, 2. Semiterrestrial, 3. Exclusively Aquatic. The species belonging to the Complex Substrates group had long ambulatory legs, as well as being heteroquely related to uneven terrain. Semiterrestrial species showed ambulatory legs of different sizes, allowing them to walk easily on the terrestrial terrain due to the long fourth ambulatory leg, and long eyestalks which are important for visual communication. Exclusively Aquatic species showed the largest carapace widths and the shortest eyestalks. The presence of different crab lineages in the environments analyzed allows us to demonstrate the clear evolutionary convergence, by which the crabs adapted to their specific habitat and environment.
DOI: 10.6084/m9.figshare.14325503.v1
title: 2016.sav

description: CIS 2016 post-electoral survey
DOI: 10.6084/m9.figshare.14268875
title: The structural heterogeneity of an urbanised mangrove forest area in southeastern Brazil: Influence of environmental factors and anthropogenic stressors

description: Abstract The objective of this study is to evaluate the characteristics of the forest in an urbanised mangrove using vegetation structure and abiotic conditions to distinguish habitat heterogeneity/quality. A total of 16 points in Vitória Bay were selected in the fringe and basin forests. The variables evaluated were height and diameter of the individual trees, basal area, density, dominance, interstitial water, litter mass, grain size, organic matter and anthropogenic influences. The results indicated that the mangrove area, due to suffering intensely from various anthropogenic effects, forests with varying degrees of maturity. Areas more distant from direct human effects had a higher degree of development and environmental quality relative to points closer to urban pressures. Intermediate development levels were also observed, which indicated pulses of environmental change. Human interventions caused alterations in the development of the forest which increased the mortality rate and reduced the diameter and height of the trees. The environmental variables of salinity, organic matter, litter mass, grain size and anthropogenic stressors contributed to the structural patterns. Our data suggest that an analysis of the vegetation structure and the abiotic factors are useful indicators to evaluate habitat quality, thus providing a basis for future management.
DOI: 10.6084/m9.figshare.14268875.v1
title: The structural heterogeneity of an urbanised mangrove forest area in southeastern Brazil: Influence of environmental factors and anthropogenic stressors

description: Abstract The objective of this study is to evaluate the characteristics of the forest in an urbanised mangrove using vegetation structure and abiotic conditions to distinguish habitat heterogeneity/quality. A total of 16 points in Vitória Bay were selected in the fringe and basin forests. The variables evaluated were height and diameter of the individual trees, basal area, density, dominance, interstitial water, litter mass, grain size, organic matter and anthropogenic influences. The results indicated that the mangrove area, due to suffering intensely from various anthropogenic effects, forests with varying degrees of maturity. Areas more distant from direct human effects had a higher degree of development and environmental quality relative to points closer to urban pressures. Intermediate development levels were also observed, which indicated pulses of environmental change. Human interventions caused alterations in the development of the forest which increased the mortality rate and reduced the diameter and height of the trees. The environmental variables of salinity, organic matter, litter mass, grain size and anthropogenic stressors contributed to the structural patterns. Our data suggest that an analysis of the vegetation structure and the abiotic factors are useful indicators to evaluate habitat quality, thus providing a basis for future management.
DOI: 10.6084/m9.figshare.14325603
title: The influence of oceanographic conditions on the spatial and temporal patterns of Pleuronectiforms larvae (Teleostei) in the equatorial Atlantic Ocean

description: ABSTRACT In this study, we analyzed the composition, distribution and abundance of Pleuronectiform larvae in relation to abiotic factors (temperature and salinity) and biotic factors (phytoplanktonic and zooplanktonic biomass) in the equatorial Atlantic Ocean. The working hypothesis was that the composition and distribution pattern of Pleuronectiform larvae species present differences between the areas studied according to the hydrographical environment/factors analyzed. Ichthyoplankton was collected during Period: 1 (August - October 1995), 2 (January - April 1997), 3 (April - July 1998) and 4 (September - December 2000), in the equatorial Atlantic Ocean. We examined 562 Bongo-net (500 μm) samples that contained 719 Pleuronectiform larvae belonging to three families: Bothidae (Bothus ocellatus and Engyophrys senta), Paralichthyidae (Syacium papillosum, Citharichthys spilopterus and Citharichthys sp.) and Cynoglossidae (Symphurus sp.). The Pleuronectiform larvae accounted for 4% of total fish larvae and occurred at 37% of the oceanographic stations. B. ocellatus was the species with the highest relative abundance (70%), the greatest value occurring during Period 3 (77%), whereas the lowest relative abundance (57%) was recorded in Period 1. S. papillosum was the species presenting the second highest relative abundance (14%), with higher values during periods 1 and 4. The results demonstrated that environmental factors influence the distribution and abundance of Pleuronectiform larvae so that each species occurs in a more favourable period and place for spawning and growth. B. ocellatus was related to warmer waters and greater phytoplanktonic and zooplanktonic biomass, while S. papillosum occurred in saltier waters and at lower temperatures.
DOI: 10.6084/m9.figshare.14325603.v1
title: The influence of oceanographic conditions on the spatial and temporal patterns of Pleuronectiforms larvae (Teleostei) in the equatorial Atlantic Ocean

description: ABSTRACT In this study, we analyzed the composition, distribution and abundance of Pleuronectiform larvae in relation to abiotic factors (temperature and salinity) and biotic factors (phytoplanktonic and zooplanktonic biomass) in the equatorial Atlantic Ocean. The working hypothesis was that the composition and distribution pattern of Pleuronectiform larvae species present differences between the areas studied according to the hydrographical environment/factors analyzed. Ichthyoplankton was collected during Period: 1 (August - October 1995), 2 (January - April 1997), 3 (April - July 1998) and 4 (September - December 2000), in the equatorial Atlantic Ocean. We examined 562 Bongo-net (500 μm) samples that contained 719 Pleuronectiform larvae belonging to three families: Bothidae (Bothus ocellatus and Engyophrys senta), Paralichthyidae (Syacium papillosum, Citharichthys spilopterus and Citharichthys sp.) and Cynoglossidae (Symphurus sp.). The Pleuronectiform larvae accounted for 4% of total fish larvae and occurred at 37% of the oceanographic stations. B. ocellatus was the species with the highest relative abundance (70%), the greatest value occurring during Period 3 (77%), whereas the lowest relative abundance (57%) was recorded in Period 1. S. papillosum was the species presenting the second highest relative abundance (14%), with higher values during periods 1 and 4. The results demonstrated that environmental factors influence the distribution and abundance of Pleuronectiform larvae so that each species occurs in a more favourable period and place for spawning and growth. B. ocellatus was related to warmer waters and greater phytoplanktonic and zooplanktonic biomass, while S. papillosum occurred in saltier waters and at lower temperatures.
DOI: 10.6084/m9.figshare.14325607
title: Distribution of the species of Lucifer Thompson, 1829 in the subtropical South Atlantic between parallels 20º and 30ºs

description: Abstract The distribution of the species of Lucifer Thompson, 1829 (Decapoda: Luciferidae) in the South Atlantic Subtropical Gyre was assessed by the Brazil Transatlantic Commission in November and December 2009. The samples were collected at 83 stations on two profiles between Brazil and Africa (20 º and 30 ºS). Oblique hauls were performed with a WP-2 net up to 150 meters deep. A distinct sexual relationship was noted between the two species found and L. faxoni presented a significantly higher number of females relative to males 1:0.5 (X2 = 21.77, p = 0.0001). The L. typus sex ratio had significantly more males than females 1.86:1 (X2=50.84, p = 0.0001). The distribution of L. typus occurred in both the western and the eastern portions of the Mid-Oceanic Ridge. This distribution was significantly related to salinity (R2 = 0:13; F = 3.79, p = 0.009), which was higher in the western portion of the study area. In addition, the recordings of the two species were extended to the Atlantic Subtropical Gyre. Overall, Luciferidae shrimp were more common and abundant at the stations west of the Mid-Oceanic Ridge and L. typus was the most frequent and abundant species.
DOI: 10.6084/m9.figshare.14325607.v1
title: Distribution of the species of Lucifer Thompson, 1829 in the subtropical South Atlantic between parallels 20º and 30ºs

description: Abstract The distribution of the species of Lucifer Thompson, 1829 (Decapoda: Luciferidae) in the South Atlantic Subtropical Gyre was assessed by the Brazil Transatlantic Commission in November and December 2009. The samples were collected at 83 stations on two profiles between Brazil and Africa (20 º and 30 ºS). Oblique hauls were performed with a WP-2 net up to 150 meters deep. A distinct sexual relationship was noted between the two species found and L. faxoni presented a significantly higher number of females relative to males 1:0.5 (X2 = 21.77, p = 0.0001). The L. typus sex ratio had significantly more males than females 1.86:1 (X2=50.84, p = 0.0001). The distribution of L. typus occurred in both the western and the eastern portions of the Mid-Oceanic Ridge. This distribution was significantly related to salinity (R2 = 0:13; F = 3.79, p = 0.009), which was higher in the western portion of the study area. In addition, the recordings of the two species were extended to the Atlantic Subtropical Gyre. Overall, Luciferidae shrimp were more common and abundant at the stations west of the Mid-Oceanic Ridge and L. typus was the most frequent and abundant species.
DOI: 10.6084/m9.figshare.14325609.v1
title: Photosynthetic responses of corals Mussismilia harttii (Verrill, 1867) from turbid waters to changes in temperature and presence/absence of light

description: Abstract Responses of corals to climate change stresses are species and locality specific. As light is an important component of temperature-induced stresses, we experimentally tested the responses of a turbid water coral, Mussismilia harttii, to changes in temperature in the presence and absence of light. Chlorophyll fluorescence parameters were measured using a diving-PAM. Experiments were carried out at distinct temperatures. Polyps were kept in the dark or were continuously exposed to 300 µmol photons m-2.s-1 irradiance. No visible bleaching of coral samples was seen in temperatures between 26.5 and 35.0 ºC, but most polyps at higher temperatures showed signs of tissue necrosis. There was a reduction of Fv/Fm as temperature increased, with a further drop in the presence of light, indicating a synergistic effect of these factors. We suggest that the photodamage to M. harttii endosymbionts triggered by temperatures of 33.0 ºC and 35.0 ºC results from a decline of the repair process, as well as the effect of light on the PSII. Recovery data for polyps kept in 31.0 ºC showed that this temperature (depending on time of exposure) seems to be borderline; temperatures higher than 31.0 ºC lead to long-term damage or death of M. harttii.
DOI: 10.6084/m9.figshare.14325609
title: Photosynthetic responses of corals Mussismilia harttii (Verrill, 1867) from turbid waters to changes in temperature and presence/absence of light

description: Abstract Responses of corals to climate change stresses are species and locality specific. As light is an important component of temperature-induced stresses, we experimentally tested the responses of a turbid water coral, Mussismilia harttii, to changes in temperature in the presence and absence of light. Chlorophyll fluorescence parameters were measured using a diving-PAM. Experiments were carried out at distinct temperatures. Polyps were kept in the dark or were continuously exposed to 300 µmol photons m-2.s-1 irradiance. No visible bleaching of coral samples was seen in temperatures between 26.5 and 35.0 ºC, but most polyps at higher temperatures showed signs of tissue necrosis. There was a reduction of Fv/Fm as temperature increased, with a further drop in the presence of light, indicating a synergistic effect of these factors. We suggest that the photodamage to M. harttii endosymbionts triggered by temperatures of 33.0 ºC and 35.0 ºC results from a decline of the repair process, as well as the effect of light on the PSII. Recovery data for polyps kept in 31.0 ºC showed that this temperature (depending on time of exposure) seems to be borderline; temperatures higher than 31.0 ºC lead to long-term damage or death of M. harttii.
DOI: 10.6084/m9.figshare.14325613
title: Macrobenthos of the coastal Budi Lagoon, southern Chile: Changes associated with seasonal environmental variation

description: Abstract The purpose of the present study was to investigate the seasonal relationship of macrobenthos richness and abundance with sediment characteristics (i.e. texture and organic material) for the coastal Budi Lagoon in southern Chile. Physicochemical measurements and macrobenthos samples were taken over the course of a year at nine sampling stations. Sandy-muddy sediment was the most common, and high percentages of organic material were registered, varying significantly between seasons and stations. The recorded organic material was related to natural (resident wild birds) and anthropogenic (agriculture) sources. Regarding fauna, 28 benthonic taxa and 7092 individuals were identified, with temporal and spatial variations. The most abundant taxa year-round were the molluscs Littoridina cumingii and Kingiella chilenica and the bristle worm Prionospio patagonica. Together, the obtained results evidence the important impact of organic material on the macrobenthos, with macrobenthic richness and abundance decreasing in conditions of high organic material content. The recorded variations for different taxa may indicate a response to the land use around the Budi Lagoon, which is intensely subjected to agricultural and tourist activities.
DOI: 10.6084/m9.figshare.14325613.v1
title: Macrobenthos of the coastal Budi Lagoon, southern Chile: Changes associated with seasonal environmental variation

description: Abstract The purpose of the present study was to investigate the seasonal relationship of macrobenthos richness and abundance with sediment characteristics (i.e. texture and organic material) for the coastal Budi Lagoon in southern Chile. Physicochemical measurements and macrobenthos samples were taken over the course of a year at nine sampling stations. Sandy-muddy sediment was the most common, and high percentages of organic material were registered, varying significantly between seasons and stations. The recorded organic material was related to natural (resident wild birds) and anthropogenic (agriculture) sources. Regarding fauna, 28 benthonic taxa and 7092 individuals were identified, with temporal and spatial variations. The most abundant taxa year-round were the molluscs Littoridina cumingii and Kingiella chilenica and the bristle worm Prionospio patagonica. Together, the obtained results evidence the important impact of organic material on the macrobenthos, with macrobenthic richness and abundance decreasing in conditions of high organic material content. The recorded variations for different taxa may indicate a response to the land use around the Budi Lagoon, which is intensely subjected to agricultural and tourist activities.
DOI: 10.6084/m9.figshare.14325615
title: Spatiotemporal distribution of the benthic macrofauna in an urbanized subtropical estuary: environmental variations and anthropogenic impacts

description: Abstract This study was conducted in the Itajaí-Açu river lower estuary in Southern Brazil, in which we aimed to: (1) analyze spatiotemporal variations on the macrofauna; (2) search for relationships between environmental variables and the assembly and (3) evaluate the influence of capital dredging upon the assembly. Two hundred twenty eight samples were performed in four stations, two of which affected by dredging. Sediment (sand, silt and clay, organic matter and carbonate) and water column´s variables (temperature, salinity, pH, dissolved oxygen, and turbidity) were also assessed. We applied Principal Component Analysis for environmental variables and Hierarchical Clustering for biotic data. Correlations between environmental and biotic matrices were tested by Canonical Analysis of Principal Coordinates. Spatiotemporal variations in the assembly were tested by Permutational Multivariate Analysis of Variance. From the 21.839 organisms sampled, 97% was represented by the gastropod Heleobia australis. Despite the influence of the river discharge on the ecosystem, dredging was deleterious to the assembly, favoring opportunistic organisms such as H. australis.