cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24874173.v1
title: Heart rate and insula activity increase in response to music in individuals with high interoceptive sensitivity

description: This dataset accompanies the research paper titled "Heart rate and insula activity increase in response to music in individuals with high interoceptive sensitivity" authored by Toru Maekawa, Takafumi Sasaoka, Toshio Inui, Alan S. R. Fermin, and Shigeto Yamawaki.<b>1. Trial Data</b><b>File Name:</b> trial_data.zip<b>Contents of Zip:</b> Individual CSV files for each participant<b>Contents of CSV Files:</b>session: The session number.music_type: The type of music stimulus (tonal, atonal, discord).valence_rating: The strength of the emotional response to the music.RT: Reaction time.PPG_music_start: The start time of PPG data at music onset.PPG_response_start: The start time of PPG data at response onset.PPG_ITI_start: The start time of PPG data at the onset of the inter-trial interval.<b>2. PPG Data</b><b>File Name:</b> PPG_data.zip<b>Contents of Zip:</b> Individual CSV files for each participant and session<b>Contents of CSV Files:</b>time: Timestamp of the PPG recording.PPG: The recorded PPG signal.<b>Additional Information:</b> The original data was recorded at 1000Hz but has been resampled to 100Hz for data lightening.<b>3. Heartbeat Discrimination Task Data</b><b>File Name:</b> HDT_data.zip<b>Contents of Zip:</b> Individual CSV files for each participant<b>Contents of CSV Files:</b>delay: The delay time condition.response: Participant's response (sync or async).confidence: Confidence level in the response.resting_RRI: Resting RR interval.
DOI: 10.6084/m9.figshare.25127135.v1
title: Foundation Models for Geospatial Reasoning: Assessing the Capabilities of Large Language Models in Understanding Geometries and Topological Spatial Relations

description: AI foundation models have demonstrated some capabilities for the understanding of geospatial semantics. However, applying such pre-trained models directly to geospatial datasets remains challenging due to their limited ability to represent and reason with geographical entities, specifically vector-based geometries and natural language descriptions of complex spatial relations. To address these issues, we investigate the extent to which a well-known-text (WKT) representation of geometries and their spatial relations (e.g., topological predicates) are preserved during spatial reasoning when the geospatial vector data are passed to large language models (LLMs) including GPT-3.5-turbo, GPT-4, and DeepSeek-R1. Our workflow employs three distinct approaches to complete the spatial reasoning tasks for comparison, i.e., geometry embedding-based, prompt engineering-based, and everyday language-based evaluation. Our experiment results demonstrate that both the embedding-based and prompt engineering-based approaches to geospatial question-answering tasks with GPT models can achieve an accuracy of over 0.6 on average for the identification of topological spatial relations between two geometries. Among the evaluated models, GPT-4 with few-shot prompting achieved the highest performance with over 0.66 accuracy on topological spatial relation inference. Additionally, GPT-based reasoner is capable of properly comprehending inverse topological spatial relations and including an LLM-generated geometry can enhance the effectiveness for geographic entity retrieval. GPT-4 also exhibits the ability to translate certain vernacular descriptions about places into formal topological relationships, and adding the geometry-type or place-type context in prompts may improve inference accuracy, but it varies by instance. The performance of these spatial reasoning tasks unveils the strengths and limitations of the current LLMs in the processing and comprehension of geospatial vector data and offers valuable insights for the refinement of LLMs with geographical knowledge towards the development of geo-foundation models capable of geospatial reasoning.
DOI: 10.6084/m9.figshare.29019059.v2
title: Assessment of Microvessel Isolation Protocol by Follow-on Immunostaining and Confocal Microscopy to Visually Gauge the Level of Capillary Enrichment and the Inclusion of Vessels containing alpha-Smooth Muscle Actin-positive Cells.

description: Validation study of murine brain microvessel collection methods comparing the output from samples generated from: Group 1--whole brain, Group 2--enrichment by density gradient centrifugation (DSG), and Group 3--DSG plus follow-on filtration. Microvessel fragment output from each protocol was analyzed by applying the following protocol: fixation by 4% paraformaldehyde in PBS, immunostaining for specific vascular markers (Endothelial cells--IsolectinB4 or PECAM-1/CD31, Mural cells-- PDGFRbeta or alpha Smooth Muscle Actin/aSMA). A subset of samples were collected from NG2:DsRed/+ animals. Cell nuclei were labeled with DAPI.
DOI: 10.6084/m9.figshare.29066477.v1
title: avm.pptx

description: It contains ultrsound, MRT, CT and DSA of AVM cases
DOI: 10.6084/m9.figshare.3516971.v1
title: Appendix A. Acquisition of data points used in fitting a Random Forests classification tree to point locations within 46 North American biomes.

description: Acquisition of data points used in fitting a Random Forests classification tree to point locations within 46 North American biomes.
DOI: 10.6084/m9.figshare.7361270.v3
title: 300 Random Asian Faces

description: Three-Hundred Random Asian Faces. LAST UPDATE: November 2018.DongWon Oh (New York University)Shuo Wang (West Virginia University)Alexander Todorov (Princeton University).<br>These 300 images are "twins" of 300 Caucasian faces that were randomly generated using the Facegen Modeller program (http://facegen.com) Version 3.1. The exact procedures are described in Oosterhof and Todorov 2008 (visit for details: http://tlab.princeton.edu/databases/randomfaces/). In the "300 Random Asian Faces", the FaceGen parameter coordinates of the 300 random Caucasian FaceGen faces are shifted so that the coordinates of the face images center around the average coordinates of the East Asian face in the FaceGen model, which were calculated from the actaual East Asian faces, measured via 3d laser scanning. This shifting procedure essentially makes the faces on average appear more East Asian.<br>This face image set can be used for example when building a data-driven face evaluation model of Asian faces (e.g., a face model of trustworthiness judgement). See Oosterhof & Todorov (2008) and Todorov & Oosterhof (2011) for details.<br>If you use any of the images from the set, cite the following article:<br>Oosterhof, N. N., & Todorov, A. (2008). The functional basis of face evaluation. Proceedings of the National Academy of Sciences of the USA, 105(32), 11087–11092. http://doi.org/10.1073/pnas.0805664105
DOI: 10.6084/m9.figshare.9815753.v3
title: EQiPD systematic review of guidelines for rigor in animal experiments data

description: Dataset generated by the systematic review to identify guidelines for internal validity in the design, conduct and analysis of biomedical experiments involving laboratory animals by the EQiPD (European Quality in Preclinical Data) consortium.<br>
DOI: 10.17632/k7zspbmyvf
title: Data for: Study on time-temperature-transformation diagrams of stainless steel using machine-learning approach

description: Training set and validating set of six features for prediction
DOI: 10.17632/mkd8fw935c
title: Data for: Evaluation of transcriptional biomarkers using a high-resolution regression approach: Concentration-dependence of selected transcripts in copper-exposed freshwater mussels (Anodonta anatina)

description: Data for the paper 'Evaluation of transcriptional biomarkers using a high-resolution regression approach: Concentration-dependence of selected transcripts in copper-exposed freshwater mussels (Anodonta anatina)'.

ABSTRACT: We tested concentration-dependence of selected gene transcripts (cat, gst, hsp70, hsp90, mt and sod) for evaluation as biomarkers of chemical stress. Contrary to the common approach of factorial designs and few exposure concentrations, we used regression across a high-resolution concentration series. Specifically, freshwater mussels (Anodonta anatina) were acutely (96 h) exposed to Cu (13 nominal concentrations, measuring 0.13–1 600 µg/L), and transcripts were measured by RT-qPCR. In digestive glands, cat, hsp90 and mt decreased with water Cu (p < 0.05), but response magnitudes saturated at < 2-fold decreases. In gills, gst, hsp70, hsp90 and mt increased with water Cu (p < 0.05). While hsp70, hsp90 and mt exceeded 2-fold increases within the exposure range, high Cu concentrations were required (38–160 µg/L). Although gill responses were generally more robust compared to digestive glands, overall small response magnitudes and moderate sensitivity may set limit for potential application as general biomarkers of chemical stress.

Full reference:
Ekelund Ugge, G.M.O., Jonsson, A., Walstad, A., Berglund, O. (2022). Evaluation of transcriptional biomarkers using a high-resolution regression approach: Concentration-dependence of selected transcripts in copper-exposed freshwater mussels (Anodonta anatina). Environ Toxicol Pharmacol, 90, 103795.
https://doi.org/10.1016/j.etap.2021.103795
DOI: 10.6084/m9.figshare.13220681.v2
title: Appendix: The final set of analyzed publications in a paper: “How is open access accused of being predatory? The impact of Beall's lists of predatory journals on academic publishing”

description: Appendix of the paper: "How is open access accused of being predatory? The impact of Beall's lists of predatory journals on academic publishing".<br>
DOI: 10.6084/m9.figshare.14159495.v1
title: Supplementary Material for: Serum Phosphorus Levels are Associated with Intradialytic Hypotension in Hemodialysis Patients

description: <b><i>Background:</i></b> Intradialytic hypotension (IDH) is a common serious complication in hemodialysis (HD) patients. Hyperphosphatemia is also common in HD patients and promotes vascular calcification. Given the association between vascular calcification and IDH, we investigated the association between IDH and serum phosphorus in HD patients. <b><i>Methods:</i></b> We enrolled 173 patients who received HD for 3 months or more. IDH was defined as a nadir systolic blood pressure (SBP) &lt;90 mm Hg or as a decrease in SBP ≥20 mm Hg or a decrease in mean arterial pressure by 10 mm Hg with the occurrence of hypotension-related symptoms requiring intervention. Serum phosphorus levels were analyzed both as a continuous variable and as a categorical variable. <b><i>Results:</i></b> IDH occurred in 40 (23.1%) of the 173 patients. The mean phosphorus level was 4.9 mg/dL. A 1 mg/dL higher serum phosphorus resulted in a 2.1-fold greater odds of IDH. The fully adjusted odds ratio (OR) and 95% confidence interval (CI) were 2.11 (1.48–3.01). High categorized phosphorus levels were also associated with IDH. The highest tertile of serum phosphorus was associated with 6.5-fold greater odds of developing IDH compared to the referent group (the middle tertile of serum phosphorus, 4.0–&lt;5.3 mg/dL); the fully adjusted OR (95% CIs) were 6.53 (2.23–19.09). In subgroup analyses, diabetes and pre-dialysis SBP modified the association between IDH and phosphorus levels, with a more pronounced association in diabetic patients and pre-dialysis SBP ≥140 mm Hg. <b><i>Conclusion:</i></b> In HD patients, higher phosphorus levels were associated with an increased occurrence of IDH.
DOI: 10.6084/m9.figshare.6118505.v2
title: DBpedia Neural Question Answering (DBNQA) dataset

description: This resource contains a large and comprehensive dataset of 894,499 pairs of questions and SPARQL queries, materialized using the NSpMT.
DOI: 10.6084/m9.figshare.7594433.v2
title: Unobtrusive Mattress-based Identification of Hypertension by Integrating Classification and Association Rule Mining

description: It contans 128 BCG recordings (61 hypertensive and 67 normotensive), and the software code of association classifier.
DOI: 10.17632/4fk3cjfcyp
title: Development of Inequity Aversion in Argentine Children in Different SES populations

description: This dataset and its respective codes analyze the development of inequity aversion in Argentine children in two groups of SES using the Inequity Game. The results indicate that 
- Middle-SES children showed greater signs of disadvantageous inequity aversion than low-SES children.
- Middle and low-SES Argentine children between 5 and 12 years old did not present advantageous inequity aversion. 
- Girls showed a tendency of greater levels of advantageous inequity aversion than boys.
- Boys showed higher levels of disadvantageous inequity aversion than girls.
DOI: 10.6084/m9.figshare.3473654.v2
title: Using_protoarray_data_for_diagnostics_of_Alzheimers_disease.zip

description: Protoarray Data from http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE29676
DOI: 10.6084/m9.figshare.21215135.v1
title: Species origins from Brambach et al.

description: Species origins assigned by Brambach et al. 2020. J. Biogeography.
DOI: 10.6084/m9.figshare.22790810.v6
title: Metadata for Datasets and Relationships

description: This dataset contains two tables. One table contains metadata for "citable" datasets (datasets that have either a DOI or a compact identifier). The other table contains the relationships between each pair of datasets in the first table.We generated this corpus of dataset metadata by crawling the Web to find pages with schema.org or DCAT metadata indicating that the page contains a dataset. The metadata for datasets includes information such as the dataset’s name, description, provider, creation date, Digital Object Identifiers (DOI), and more. Out of the 46 million dataset pages that have schema.org, we publish this subset of 4.3 million dataset-metadata entries that are citable. We also include an additional table on relationships between these datasets.<i>Please contact </i><i>dataset-search@</i><i>googlegroups.com</i><i> if you have any questions or requests to remove a dataset that you own from this collection.</i>
DOI: 10.17632/bbkp8sgghr
title: Data for: How Negative Interest Rates Affect the Risk-taking of Individual Investors: Experimental Evidence

description: Experiment data used in our paper "How Negative Interest Rates Affect the Risk-taking of Individual Investors: Experimental Evidence".
DOI: 10.17632/x425rv9f49
title: LINF_180017900

description: PIH1-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.14794971.v1
title: Thrips on Honey Bees Data [17June2021].xlsx

description: Raw data about observations of thrips on honey bees<br>
DOI: 10.6084/m9.figshare.25902679.v1
title: Test Results of Fractional Denoising

description: This is the Source Data for Figures in the Paper ``Pre-training with Fractional Denoising to Enhance Molecular Property Prediction".
DOI: 10.6084/m9.figshare.26527021.v1
title: Genes predicted in the <i>Phytophthora meadii </i>P19<i> </i>genome assembly using the MAKER pipeline, with Augustus and GeneMark-EP+

description: A total of 18,046 genes were predicted from the <i>P. meadii </i>genome assembly using the MAKER pipeline, with Augustus and GeneMark-EP+ as <i>ab initio</i> gene prediction tools. An average of 2.2 exons per gene were predicted, while the average length of the predicted genes was approximately 1877.46 bp.
DOI: 10.6084/m9.figshare.28218842.v1
title: Relative embryo size macroevolution in angiosperms

description: Data and phylogenetic tree used to model embryo size macroevolution in angiosperms.
DOI: 10.17632/57sw2w23tw
title: Monthly monitoring of vital physicochemical parameters of surface and spring water used for drinking and domestic purposes in cholera prone communities of Uganda, 2015-2016

description: Cholera is a major cause of morbidity and mortality in Uganda[1] . Cholera outbreaks affect predominantly communities using the surface water and the springs[2, 3]. To prevent and control cholera outbreaks in these communities, promotion of use of safe water (both quantity and quality), improved sanitation and hygiene are prioritized interventions by the Uganda Ministry of Health. Few studies exist on the physicochemical characteristics of the drinking water and water in general in Uganda. Information from available studies is inadequate for use to increase safe water in cholera prone districts of Uganda. Water samples were collected monthly from 27 sites used by the communities for collection of drinking water. Water was tested to determine the vital physicochemical parameters namely the pH, temperature, dissolve oxygen, conductivity and turbidity. The sites for water testing were identified with the guidance of the local communities and after direct observation by the study team. Geo-coordinates of the sites were taken at the beginning of the study to ensure that subsequent water collection and measurements were done on water from specific points. The study found that all test sites (100%, 27/27) had higher than the World Health Organization recommended mean water turbidity of 5NTU and the water temperature of above 17°C. In addition, more than a quarter (27%) of lake sites and 2/5 of the ponds had pH and dissolved oxygen outside the WHO recommended range (recommended range for dissolved oxygen, less than 5 mg/L and for pH, 6.5 – 8.5). The surface and spring water in cholera prone communities in Great Lakes basins of Uganda were unsafe in terms of vital physicochemical water parameters and were favourable for the transmission of waterborne diseases, including cholera. Therefore, in order to prevent cholera and other waterborne diseases in the study area water for drinking and food preparation should be disinfected / treated. 1. Bwire G, Malimbo M, Maskery B, Kim YE, Mogasale V, Levin A. The Burden of Cholera in Uganda. PLoS Negl Trop Dis. 2013;7:e2545. doi:10.1371/journal.pntd.0002545. 2. Pande G, Kwesiga B, Bwire G, Kalyebi P, Riolexus AA, Matovu JKB, et al. Cholera outbreak caused by drinking contaminated water from a lakeshore water-collection site, Kasese District, south-western Uganda, June-July 2015. PLoS One. 2018;13:e0198431. doi:10.1371/journal.pone.0198431. 3. Kwesiga B, Pande G, Ario AR, Tumwesigye NM, Matovu JKB, Zhu BP. A prolonged, community-wide cholera outbreak associated with drinking water contaminated by sewage in Kasese District, western Uganda. BMC Public Health. 2017;18.
DOI: 10.17632/rkyfwv9hw8
title: Clip #1

description: Road footage recorded using Logitech C525 webcam on Perodua Kancil 660 EX.
DOI: 10.6084/m9.figshare.25559178.v1
title: Genome annotation of the <i>Rhabdophis nuchalis</i>

description: Genome annotation of the <i>Rhabdophis nuchalis</i>
DOI: 10.4121/13264931.v2
title: Data supplementary to the publication: Complete mapping of the thermoelectric properties of a single molecule

description: Raw Data of the Paper on Nature nanotechnology: Complete mapping of the thermoelectric properties of a single molecule
DOI: 10.6084/m9.figshare.24001992.v1
title: Fluctuation-dependent coexistence of stage-structured species

description: Model parameters and code used in the manuscript "Fluctuation-dependent coexistence of stage-structured species" by CM Werner, LM Hallett, and LG Shoemaker. Additional information in read me file.
DOI: 10.6084/m9.figshare.25450210.v1
title: master data.xlsx

description: A double-blind, randomized controlled trial was conducted on 36 residents of a nursing home in Jakarta. The participants, aged between 60 and 80 years, had been diagnosed with dry skin. Each test subject was administered three distinct, randomized moisturizing lotions (LMWHA, HMWHA, or vehicle), to be topically applied to three separate sites on the leg. Skin capacitance (SCap), transepidermal water loss (TEWL), and SRRC scores were measured at weeks 0, 2, and 4.
DOI: 10.6084/m9.figshare.27199266.v1
title: All data items for "Museomics sheds light on evolutionary diversity in a critically endangered cockatoo species from Wallacea"

description: Data items:VCF files containing the SNPs for 2 datasets: 1) <i>C. sulphurea </i>plus <i>C. galerita,</i> 2) <i>C. sulphurea, C. galerita</i> plus <i>C. sanguinea</i> (and corresponding namelists that indicates which sample the codes pertain to). Fasta files of alignments for mtDNA genes CytB, COI, ND2 for <i>C. sulphurea</i> subspecies and <i>C. galerita.</i>SFS files for <i>C. sulphurea</i> subspecies and other Cacatua species used to calculate <i>Da</i>Abstract:Accurate identification of evolutionarily significant units of rare and threatened organisms provides a foundation for effective management and conservation. Up to seven subspecies of the critically endangered Yellow-crested Cockatoo (Cacatua sulphurea) have been described, four of which were commonly recognised pre-2014. In the absence of genotypic data, C. sulphurea subspecies delimitation has been based on morphology, behaviour and biogeography. To clarify genetic relationships and shed light on the diversification of this parrot radiation, whole genomes were sequenced for 16 museum specimens, covering the geographic range of the proposed seven subspecies as well as one C. galerita galerita. Combined with four museum-derived wild Cacatua sequences from NCBI, the results indicate there are three distinct C. sulphurea subspecies clusters centred in different biogeographic subregions of Wallacea (Timor; Sumba; as well as the Sulawesi Region and the main Lesser Sunda chain), separated by shallow genetic distances (da&lt;0.148%). The results raise questions about the recent species-level elevation of the phenotypically most distinct subspecies, C. s. citrinocristata, and about the origins of C. s. abbotti, the only subspecies west of Wallace’s Line. Our analyses suggest C. s. abbotti is unlikely to be embedded within C. sulphurea, suggesting its origin on the remote Masalembu islands may be due to human translocation via historical trade routes. These genomic results inform the prioritisation and streamlining of conservation measures for the critically endangered C. sulphurea by identifying and delimiting likely conservation units.
DOI: 10.6084/m9.figshare.28187072.v3
title: CP4A & P25 Hourly Potential Evapotranspiration Dataset

description: CP4A Africa Hourly Potential Evapotranspiration (PET) Dataset. PET is computed using the Penman-Monteith methodology based on the approach given by Singer, M.B., Asfaw, D.T., Rosolem, R., Cuthbert, M.O., Miralles, D.G., MacLeod, D., Quichimbo, E.A. and Michaelides, K., 2021. Hourly potential evapotranspiration at 0.1 resolution for the global land surface from 1981-present. <i>Scientific Data</i>, <i>8</i>(1), p.224.Data was computed using seven atmospheric variables lifted directly from the Convection Permitting Model for Africa:<br><br>1. 10 m zonal (u) wind speed (m s-1)2. 10 m meridional (v) wind speed3. 2 m dew point temperature (K)4. 2 m air temperature (K)5. Surface net solar radiation (J m-2)6. Surface net thermal radiation (J m-2)7. Atmospheric surface pressure (Pa)
DOI: 10.17632/5zwsfs83zx
title: Multilateral Bargaining with Subjective Claims

description: We experimentally investigate the effects of subjective claims in a multilateral bargaining game. Claims are induced by having subjects `produce' the surplus to be divided by earning points in a quiz task. We use a Baron Ferejohn framework. Our main treatment variable is the majority required to pass a proposal. Under unanimity rule, all proposals and agreements constitute convex combinations of the equal split and a division that is proportional to points earned in the productive task. Contrary to our predictions, this pattern largely persists under majority rule. In sharp contrast to prior experiments in which an exogenous surplus is divided using majority rule, few subjects attempt to build minimum winning coalitions in the presence of claims from production. Inefficient delay due to proposal failure is more frequent under unanimity rule, especially in the presence of asymmetric claims. We also find modest evidence that subjects who make proposals that fail are subsequently "punished" under majority rule.