cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1377436.10fu
title: SH1377436.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377437.10fu
title: SH1377437.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.28377821
title: Chemical reprogramming of fibroblasts into retinal pigment epithelium cells for vision restoration

description: Restoring retinal pigment epithelium (RPE) cells is crucial for treating retinal degenerative (RD) diseases, with chemical reprogramming offering a transformative, scalable solution. However, identifying key compounds for generating functional RPE cells remains challenging. Here, we present a two-step chemical reprogramming strategy to convert fibroblasts into functional RPE (ciRPE) cells. Leveraging the Single-Cell Reprogramming Compound Finder (scRCF), which integrates transcriptomics-guided predictions with advanced screening, we identified compound cocktails that precisely and efficiently reprogram fibroblasts through an intermediate state into ciRPE cells. These ciRPE cells closely mimic the structure and function of native RPE cells, and upon transplantation into RD rats, they seamlessly integrate into host tissue, protect photoreceptors, and restore visual function. Omics and mechanistic analyses revealed that the identified compounds synergistically activate core transcription factors, including Ascl1 and Olig2, orchestrating the reprogramming process. This study provides a scalable, non-integrative approach for generating functional RPE cells, offering a promising strategy for cell replacement therapies targeting RD diseases.
DOI: 10.6084/m9.figshare.28377821.v1
title: Chemical reprogramming of fibroblasts into retinal pigment epithelium cells for vision restoration

description: Restoring retinal pigment epithelium (RPE) cells is crucial for treating retinal degenerative (RD) diseases, with chemical reprogramming offering a transformative, scalable solution. However, identifying key compounds for generating functional RPE cells remains challenging. Here, we present a two-step chemical reprogramming strategy to convert fibroblasts into functional RPE (ciRPE) cells. Leveraging the Single-Cell Reprogramming Compound Finder (scRCF), which integrates transcriptomics-guided predictions with advanced screening, we identified compound cocktails that precisely and efficiently reprogram fibroblasts through an intermediate state into ciRPE cells. These ciRPE cells closely mimic the structure and function of native RPE cells, and upon transplantation into RD rats, they seamlessly integrate into host tissue, protect photoreceptors, and restore visual function. Omics and mechanistic analyses revealed that the identified compounds synergistically activate core transcription factors, including Ascl1 and Olig2, orchestrating the reprogramming process. This study provides a scalable, non-integrative approach for generating functional RPE cells, offering a promising strategy for cell replacement therapies targeting RD diseases.
DOI: 10.15156/bio/sh1377439.10fu
title: SH1377439.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377441.10fu
title: SH1377441.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377442.10fu
title: SH1377442.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.30624377
title: Observation of a mixed close-packed structure in superionic water

description: This dataset contains source data underlying the analyses and figures presented in the associated manuscript. It includes the numerical values from hydrodynamic simulations velocity measurements obtained from VISAR diagnostics, and X-ray diffraction datasets.
DOI: 10.6084/m9.figshare.30624377.v1
title: Observation of a mixed close-packed structure in superionic water

description: This dataset contains source data underlying the analyses and figures presented in the associated manuscript. It includes the numerical values from hydrodynamic simulations velocity measurements obtained from VISAR diagnostics, and X-ray diffraction datasets.
DOI: 10.15156/bio/sh1377445.10fu
title: SH1377445.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377447.10fu
title: SH1377447.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377451.10fu
title: SH1377451.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377453.10fu
title: SH1377453.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3535/yx7-hrx-53e
title: Circaea alpina L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ede-gz8-l6e
title: Carex frigida All.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/pt0-dly-fy6
title: Agrostis tenuis Sibth.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/1n7-6zb-t74
title: Saxifraga aizoides L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/qlz-xkt-50h
title: Astragalus australis (L.) Lam.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/pfb-30b-38w
title: Carex lasiocarpa Ehrh.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/zgg-2x1-3sw
title: Potentilla nitida L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/e73-gdr-ehl
title: Krascheninnikovia ceratoides (L.) Gueldenst.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/nyr-fd7-796
title: Molinia caerulea (L.) Moench

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/4ss-45d-8zh
title: Carex alba Scop.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/pry-88s-fht
title: Arabidopsis lyrata subsp. petraea (L.) O'Kane & Al-Shehbaz

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/v4z-tbs-te0
title: Achillea ptarmica L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/yn8-ypw-n4p
title: Armeria alpina Willd.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/b64-1v7-rcn
title: Agrostis tenuis Sibth.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/m33-8wd-0dl
title: Potentilla supina L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.9n5hzd
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "GadmGid is CHN.6.4_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Ciconia boyciana"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064989-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/ahz-qd8-af1
title: Poa L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/hdd-wnb-mck
title: Poa L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/aar-pta-xvs
title: Knautia drymeia Heuff.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/w6v-tfe-8p3
title: Dryopteris filix-mas (L.) Schott

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ype-9xq-05v
title: Dryopteris filix-mas (L.) Schott

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/dbh-7x9-vqq
title: Campanula schimaniana Rech.f.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/n14-5xa-fmg
title: Oreochloa disticha (Wulfen) Link

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.vkmtv8
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amphilius grandis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064990-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/kqp-p8l-d7a
title: Dryopteris dilatata (Hoffm.) A. Gray

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/vne-h92-te3
title: Callianthemum coriandrifolium Rchb.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/1vn-l98-fff
title: Dryopteris dilatata (Hoffm.) A. Gray

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/98q-gp0-g8k
title: Lythrum hyssopifolia L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/703-gqb-52a
title: Knautia drymeia Heuff.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/gsc-egp-9rh
title: Dryopteris dilatata (Hoffm.) A. Gray

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/c37-xpj-gq1
title: Dryopteris dilatata (Hoffm.) A. Gray

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/z99-lmd-7ws
title: Lepidium virginicum L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/d5f-8tt-e42
title: Astragalus pseudomultijugus Podlech

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/l29-lvg-7qz
title: Juncus alpinoarticulatus Chaix

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/lpx-y3h-dyx
title: Trifolium dubium Sibth.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/7cr-y9k-7wd
title: Agrostis vinealis Schreb.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/9tm-sj0-12m
title: Jacobaea aquatica subsp. aquatica

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/6qg-m68-4gl
title: Festuca pulchra Schur

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.85rxfj
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bassus dimidiator",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 20 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064991-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/f73-dc9-nm6
title: Lepidium densiflorum Schrad.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/62q-aja-30c
title: Anthemis arvensis L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/a2m-p3j-g18
title: Xeranthemum annuum L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/dx2-7v1-zq9
title: Polygala vulgaris subsp. vulgaris

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/jkz-16f-fsb
title: Thesium ramosum Hayne

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ntg-hmh-st4
title: Euphorbia illirica Lam.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/wx9-ypb-9rf
title: Catabrosa aquatica (L.) P.Beauv.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/h78-h70-h8l
title: Thymus pannonicus All.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/5cv-7qy-gjy
title: Lotus germanicus (Gremli) Peruzzi

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/h1g-9n8-ja8
title: Lythrum salicaria L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/2zp-4zd-tes
title: Senecio vernalis Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/z1n-xy6-hfr
title: Lythrum virgatum L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/9wr-03m-3aa
title: Anthriscus nitida (Wahlenb.) Hazsl.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/h4x-zxv-p6t
title: Dryopteris dilatata (Hoffm.) A. Gray

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/n86-kym-5my
title: Anthriscus nitida (Wahlenb.) Hazsl.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/avq-sm7-ml9
title: Dryopteris dilatata (Hoffm.) A. Gray

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/xmz-bpt-0hl
title: Epilobium ciliatum Raf.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/eh2-7fq-k42
title: Epilobium ciliatum Raf.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/w3a-lys-ebq
title: Dryopteris dilatata (Hoffm.) A. Gray

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/4wf-q6f-901
title: Chaerophyllum aromaticum L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/sq8-44f-0yd
title: Salix retusa L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/3tm-2lh-xa0
title: Athyrium filix-femina (L.) Roth

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/b3j-26t-1m7
title: Chaerophyllum aromaticum L.

description: Digital Specimen for the physical specimen hosted at University of Graz.