cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3791050_d12
title: Additional file 20: Table S11. of The Cyprinodon variegatus genome reveals gene expression changes underlying differences in skull morphology among closely related species

description: Genes in scale-biter intersection set at 15 dpf. This is a comma separated table of the genes in the 15 dpf scale-biter intersection set. Given are edgeR results for each pairwise comparison. Columns indicating whether a gene is included in the intersection set at a threshold of 1.5 or 2 fold are provided. (CSV 91Â kb)
DOI: 10.3535/10e-2h9-5bx
title: Nematodirus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rt5-kcs-1xb
title: Glossiphonia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3791080_d1
title: Additional file 1 of Numerical integration methods and layout improvements in the context of dynamic RNA visualization

description: The file jViz3.0_Complete is a zip file containing a Java executable file (jViz3.0.jar), a User Manual in PDF format (jViz3.0 User Manual), and a subfolder containing RNA secondary structure files in.ct format for the RNA structures visualized in this manuscript (RNA_Structures). (ZIP 843 kb)
DOI: 10.3535/rzt-4kx-74w
title: Dugesia iranica Livanov, 1951

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y7l-18k-225
title: Spiculopteragia spiculoptera (Guschanskaja, 1931) Orloff, 1933

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3791050_d13.v1
title: Additional file 21: Table S12 of The Cyprinodon variegatus genome reveals gene expression changes underlying differences in skull morphology among closely related species

description: Genes in durophage intersection set at 48 hpf. This is a comma separated table of the genes in the 48 hpf durophage intersection set. Given are edgeR results for each pairwise comparison. Columns indicating whether a gene is included in the intersection set at a threshold of 1.5 or 2 fold are provided. (CSV 76Â kb)
DOI: 10.3535/1bs-meq-bn0
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r9m-p9z-cjr
title: Mesoglossus caraibicus (van der Horst, 1924)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x4s-y7t-7ba
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3791050_d13
title: Additional file 21: Table S12 of The Cyprinodon variegatus genome reveals gene expression changes underlying differences in skull morphology among closely related species

description: Genes in durophage intersection set at 48 hpf. This is a comma separated table of the genes in the 48 hpf durophage intersection set. Given are edgeR results for each pairwise comparison. Columns indicating whether a gene is included in the intersection set at a threshold of 1.5 or 2 fold are provided. (CSV 76Â kb)
DOI: 10.3535/mcm-7x2-6yp
title: Otostrongylus circumlitus (Railliet, 1899) de Bruyn, 1933

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q6v-0x7-xp2
title: Toxascaris leonina (Linstow, 1902) Leiper, 1907

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2k7-jg6-ae9
title: Hymenolepididae Ariola, 1899

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/36d-8pd-adh
title: Tubiluchus corallicola van der Land, 1968

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3791050_d14.v1
title: Additional file 22: Table S13. of The Cyprinodon variegatus genome reveals gene expression changes underlying differences in skull morphology among closely related species

description: Genes in durophage intersection set at 96 hpf. This is a comma separated table of the genes in the 96 hpf durophage intersection set. Given are edgeR results for each pairwise comparison. Columns indicating whether a gene is included in the intersection set at a threshold of 1.5 or 2 fold are provided. (CSV 26Â kb)
DOI: 10.3535/k6h-l08-x16
title: Tubiluchus corallicola van der Land, 1968

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tdt-590-hcz
title: Plagiorhynchus Lühe, 1911

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/prp-wsg-qq7
title: Eunereis longissima (Johnston, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c7d-4tw-3w5
title: Paramphistomum Fischoeder, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gt2-jec-bfd
title: Strigea caluri Dubois, 1962

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3791050_d14
title: Additional file 22: Table S13. of The Cyprinodon variegatus genome reveals gene expression changes underlying differences in skull morphology among closely related species

description: Genes in durophage intersection set at 96 hpf. This is a comma separated table of the genes in the 96 hpf durophage intersection set. Given are edgeR results for each pairwise comparison. Columns indicating whether a gene is included in the intersection set at a threshold of 1.5 or 2 fold are provided. (CSV 26Â kb)
DOI: 10.6084/m9.figshare.c.3791050_d15.v1
title: Additional file 23: Table S14. of The Cyprinodon variegatus genome reveals gene expression changes underlying differences in skull morphology among closely related species

description: Genes in durophage intersection set at 8 dpf. This is a comma separated table of the genes in the 8 dpf durophage intersection set. Given are edgeR results for each pairwise comparison. Columns indicating whether a gene is included in the intersection set at a threshold of 1.5 or 2 fold are provided. (CSV 22Â kb)
DOI: 10.3535/0xf-sxp-6jv
title: Syngamus (Syngamus) trachea (Montagu, 1811) Chapin, 1925

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ytv-ccz-tag
title: Phascolosoma (Phascolosoma) pacificum Keferstein, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3hy-dzx-hzl
title: Spiculopteragia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4x8-l4d-67j
title: Spiculopteragia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3791071_d11.v1
title: Additional file 1: Table S1. of Global identification, structural analysis and expression characterization of bHLH transcription factors in wheat

description: Reference genes of bHLH genes expression analysis, the genes were downloaded from the database of NCBI. (XLSX 25Â kb)
DOI: 10.3535/dgd-qn7-bwk
title: Tripyla glomerans Bastian, 1865

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/slw-ejm-qt9
title: Sagitta Quoy & Gaimard, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3791050_d16.v1
title: Additional file 24: Table S15. of The Cyprinodon variegatus genome reveals gene expression changes underlying differences in skull morphology among closely related species

description: Genes in durophage intersection set at 15 dpf. This is a comma separated table of the genes in the 15 dpf durophage intersection set. Given are edgeR results for each pairwise comparison. Columns indicating whether a gene is included in the intersection set at a threshold of 1.5 or 2 fold are provided. (CSV 13Â kb)
DOI: 10.3535/1cp-9ar-7yb
title: Toxascaris Leiper, 1907

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9b7-cle-1k1
title: Poliopsis lacazei Joubin, 1890

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pj2-h43-htl
title: Alitta virens (M. Sars, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3791071_d11
title: Additional file 1: Table S1. of Global identification, structural analysis and expression characterization of bHLH transcription factors in wheat

description: Reference genes of bHLH genes expression analysis, the genes were downloaded from the database of NCBI. (XLSX 25Â kb)
DOI: 10.3535/4k9-0lx-ws3
title: Iphione muricata (Lamarck, 1818)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/whq-j8j-51a
title: Phyllodoce maculata (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3791050_d15
title: Additional file 23: Table S14. of The Cyprinodon variegatus genome reveals gene expression changes underlying differences in skull morphology among closely related species

description: Genes in durophage intersection set at 8 dpf. This is a comma separated table of the genes in the 8 dpf durophage intersection set. Given are edgeR results for each pairwise comparison. Columns indicating whether a gene is included in the intersection set at a threshold of 1.5 or 2 fold are provided. (CSV 22Â kb)
DOI: 10.3535/40b-8sh-163
title: Iphione muricata (Lamarck, 1818)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lse-q47-n1d
title: Nephtys hombergii Savigny in Lamarck, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a8c-sgd-qw5
title: Alitta succinea (Leuckart, 1847)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t2r-r0a-fdr
title: Circeis spirillum (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lek-35c-rfq
title: Lamellibrachia luymesi van der Land & Nørrevang, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/keb-vjg-63w
title: Baseodiscus unistriatus (Isler, 1900)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0bl-tgd-1zl
title: Lamellibrachia luymesi van der Land & Nørrevang, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pc6-njh-27t
title: Hydroides longispinosa Imajima, 1976 [original]

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/73l-9r5-qdz
title: Ancylostoma (Ancylostoma) Dubini, 1843

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y3k-0tp-b6b
title: Ascaridia Dujardin, 1844

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2rj-xfs-3aj
title: Lamellibrachia luymesi van der Land & Nørrevang, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xg9-nwc-f7z
title: Lamellibrachia luymesi van der Land & Nørrevang, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/96l-9fp-kbj
title: Bipalium kewense Moseley, 1878

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kka-dy0-f93
title: Hediste diversicolor (O.F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2dd-60a-xlb
title: Ostertagia (Ostertagia) leptospicularis Assadov, 1953

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mwx-117-mm2
title: Strigeidae Railliet, 1919

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z3g-4qz-0nr
title: Callinera grandis Bergendal, 1903

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.yhzsfp
title: Occurrence Download

description: A dataset containing 1408 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eurycea nana Bishop, 1941)"
 ]
}

 The dataset includes 1408 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040005-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/f36-q97-lfv
title: Hirudo

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zlv-z3g-xy4
title: Alitta succinea (Leuckart, 1847)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3795778_d2.v1
title: Additional file 2: Table S2. of Gene expression and adaptive noncoding changes during human evolution

description: Functions of genes expressed differentially overall MSigDB gene sets. These sets are listed from most to least enriched with genes scoring high for differential expression between humans and chimpanzees overall. Collection is the MSigDB collection containing the set (one of 16). # genes is the number of genes whose expression we measured in the set (at least 50). rrb is the rank-biserial correlation between scores for differential expression and membership in the set; sets are ordered by decreasing rrb. SE(rrb) is the standard error of rrb via bootstrapping with 10,000 replicates. (XLSX 1260 kb)
DOI: 10.3535/w7k-s2q-685
title: Decacotyle octona (Young, 1967) Chisholm & Whittington, 1998

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y0v-3b8-z4b
title: Strigeidae Railliet, 1919

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7hd-jgl-07v
title: Cosmocerca ornata (Dujardin, 1845) Diesing, 1861

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/935-anl-gdw
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a2w-68j-ch7
title: Nectonemertes mirabilis Verrill, 1892

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/beh-kbg-j1p
title: Lanice conchilega (Pallas, 1766)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3795778_d2
title: Additional file 2: Table S2. of Gene expression and adaptive noncoding changes during human evolution

description: Functions of genes expressed differentially overall MSigDB gene sets. These sets are listed from most to least enriched with genes scoring high for differential expression between humans and chimpanzees overall. Collection is the MSigDB collection containing the set (one of 16). # genes is the number of genes whose expression we measured in the set (at least 50). rrb is the rank-biserial correlation between scores for differential expression and membership in the set; sets are ordered by decreasing rrb. SE(rrb) is the standard error of rrb via bootstrapping with 10,000 replicates. (XLSX 1260 kb)
DOI: 10.3535/k93-svd-n9t
title: Lanice conchilega (Pallas, 1766)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jzq-raj-zg2
title: Baseodiscus indicus (Punnett, 1903)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nsj-yak-cf8
title: Schmidtea lugubris Schmidt, 1861

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y72-2h0-5gs
title: Vermiliopsis infundibulum (Philippi, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n7m-h44-hsp
title: Ascaridia Dujardin, 1844

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pk9-1qd-esc
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rlw-bfx-zdb
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/89n-enh-l1b
title: Porrocaecum Railliet & Henry, 1912

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tcl-6dv-wq7
title: Parafilaroides gymnurus (Railliet, 1899) Dougherty, 1946

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e1n-k18-nft
title: Syphacia (Syphacia) obvelata (Rudolphi, 1802)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/egs-13g-qj7
title: Harmothoe impar (Johnston, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pgf-rnk-jw1
title: Harmothoe impar (Johnston, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3ej-t3m-h0p
title: Eulalia viridis (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gal-w0g-89v
title: Lineus longissimus (Gunnerus, 1770)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6073/pasta/c532295a4f43573d4c42c6f9d4b0f151
title: Jornada Basin LTER Cross-scale Interactions Study (CSIS) Block 14 meteorological station: 1-hour summary data: 2017 - ongoing

description: This data package contains hourly air temperature, relative humidity, wind speed, wind direction, and precipitation summary data from Jornada Basin LTER Cross Scale Interactions Study (CSIS) Block-14 met station. Air temperature, relative humidity, wind speed, wind direction, and precipitation are measured and calculated at an automated meteorological station connected to a 900 MHz spread spectrum wireless network. Wind speed is measured at 37cm, 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Measurements are aggregated at intervals of 5, 30, 60 minutes and daily, with precipitation additionally provided with 1 second aggregation during precipitation events. Precipitation is not measured at Block 1 and Block 12 because of proximity to Block 2 and Block 13, respectively . This is an ONGOING dataset.
DOI: 10.3535/9cj-el9-zq5
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.15183949
title: ATEROSKLEROZ RIVOJLANISH MEXANIZMI VA ERTA OLDINI OLISH STRATEGIYALARI
DOI: 10.5281/zenodo.15183950
title: ATEROSKLEROZ RIVOJLANISH MEXANIZMI VA ERTA OLDINI OLISH STRATEGIYALARI
DOI: 10.15468/dl.4rr7a7
title: Occurrence Download

description: A dataset containing 17056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Trichophorum cespitosum (L.) Hartm.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 17056 records from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013408-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive120915.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0112583.10fu
title: SH0112583.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive120915.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive120916.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0112584.10fu
title: SH0112584.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.