cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27308259.v1
title: Energy Consumption of Coal Mining in Coal Resource Cities in China

description: China has a long history of coal mining, most of the mines have entered the middle and late stages of mining, and many coal resource cities are gradually depleting their coal resources, and the internal problems of coal resource cities are endless, and the contradictions between various aspects are concentrated. Coal resource cities waste a lot of energy resources every year due to coal mining. Understanding the spatial distribution of energy consumption of coal mining in China is of great significance in decision support for promoting energy system transformation and deploying future coal mining planning. The study crawled the coal production data of each coal resource city in China through the web crawler method, and measured the comprehensive energy consumption based on coal production according to the top-down method, and calculated the comprehensive energy consumption per unit of coal production in each province on this basis. The results of the data show that coal resource cities in China with coal mining energy consumption greater than 5 million tons of standard coal are mainly concentrated in the eastern region, Jin, Shaanxi, Mongolia, Ningxia and Gan.
DOI: 10.6084/m9.figshare.5121835.v1
title: Supplementary Material for: Deleterious Effect of Hyperoxia at Birth on White Matter Damage in the Newborn Rat

description: White matter damage (WMD) remains the leading cause of cerebral palsy in children born prematurely. The release of an excessive amount of reactive oxygen species is recognized as a risk factor for WMD. We hypothesize that free radical injury during reoxygenation at birth may be harmful to the immature white matter and may underlie, at least in part, the pathogenesis of WMD. We tested this hypothesis in rat pups delivered from normoxic pregnant rats, and by investigating an animal model based on protracted antenatal hypoxia in the pregnant rat and mimicking the main features of human WMD in rat pups. From embryonic day (E)5 to E21, the pregnant rats were placed in a chamber supplied with a gas mixture that either induced hypoxia (Fi<i>O</i><sub>2</sub> = 10%) or maintained normoxia (Fi<i>O</i><sub>2</sub> = 21%). On E21, the dams were removed from the chamber and housed under either normoxia (Fi<i>O</i><sub>2</sub> = 21%), hyperoxia (Fi<i>O</i><sub>2</sub> = 60%) or slowly reoxygenated (Fi<i>O</i><sub>2</sub> from 15% at E21 to 21% at postnatal day 7). Postnatal hyperoxia was associated with a significantly increased density of activated microglial cells (+105%) and TUNEL (terminal deoxynucleotidyl transferase-mediated deoxyuridine triphosphate nick end labeling)-positive cells (+85%) within the developing white matter. Myelin content (–31%) and mature oligodendrocyte density (–37%) in the normal developing white matter were significantly decreased by postnatal hyperoxia. Postnatal hyperoxia significantly potentiated the myelination delay and oligodendroglial dysmaturation induced by antenatal hypoxia. In contrast, progressive reoxygenation at birth did not induce any change in white matter inflammation, myelination and cell death as compared with normoxic controls, and prevented most of the WMD observed following antenatal hypoxia. This study demonstrates a deleterious effect of hyperoxia at birth on the developing white matter in normal rat pups. Postnatal hyperoxia worsened the WMD induced by antenatal hypoxia. Hyperoxia at birth should be avoided in preterm infants at risk of WMD.
DOI: 10.17632/8mysn39568
title: EPW: A program for calculating the electron–phonon coupling using maximally localized Wannier functions

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract EPW (Electron–Phonon coupling using Wannier functions) is a program written in Fortran90 for calculating the electron–phonon coupling in periodic systems using density-functional perturbation theory and maximally localized Wannier functions. EPW can calculate electron–phonon interaction self-energies, electron–phonon spectral functions, and total as well as mode-resolved electron–phonon coupling strengths. The calculation of the electron–phonon coupling requires a very accurate sampling of el... Title of program: EPW Catalogue Id: AEHA_v1_0 Nature of problem The calculation of the electron-phonon coupling from first principles requires a very accurate sampling of electron-phonon scattering processes throughout the Brillouin zone; hence reliable calculations can be prohibitively timeconsuming. Versions of this program held in the CPC repository in Mendeley Data AEHA_v1_0; EPW; 10.1016/j.cpc.2010.08.027 AEHA_v2_0; EPW; 10.1016/j.cpc.2016.07.028
DOI: 10.6084/m9.figshare.19699651.v1
title: CAMPA-derived cellular features

description: Cellular features of the entire 4i dataset introduced in the CAMPA manuscript, extracted using the CAMPA workflow. Extracted features are intensity per CSL (consistent subcellular landmark, identified using CAMPA), object statistics (count and size of individual CSL-components per cell) and pairwise co-occurrence scores: intensity: one csv file named `intensity_features_annotation.csv` is provided, containing mean intensity per CSL and size features<br> co-occurrence scores: one file per cluster-cluster pair named `co_occ_{cluster1}_{cluster2}_features_annotation.csv` is provided, containing co-occurrence scores at all distance intervals.<br> per object stats: one csv file named `object_stats_features_annotation.csv` is stored, containing object stats.
DOI: 10.6084/m9.figshare.20485920.v1
title: SI_3_database_of_preliminary_study.xlsx

description: database_of_preliminary_study Measurement data and player data for 19 football leagues
DOI: 10.6084/m9.figshare.1353770.v13
title: Seattle Street Clocks in 1924, 1927, 1928

description: Three inventories of every clock in downtown Seattle. They were made in 1924, 1927, and 1928. I stumbled upon them a few years ago at the Seattle Department of Transportation while I was trying to look up street use permits. I never discovered how to see old permits, but after I left a city employee emailed me saying she had found a folder of old records. Pure gold. Only the 1927 inventory included clocks outside of downtown. They all included a clock at the Japanese Commercial Bank that hung off the side of the building, and ’27 and ’28 included a similar clock at People’s Bank. Possibly those two clocks required a permit to hang out over the public right-of-way, as did the street clocks in the sidewalk. Other clocks downtown (for example on Colman ferry dock; King Street Station; Union Station) were not included, hinting at restrictive criteria.
DOI: 10.6084/m9.figshare.25554984.v1
title: HG002 Ultima (2024)

description: HG007 Ultima VCF 40x coverage from 2024from https://giab-data.s3.amazonaws.com/ultima-GIAB-Feb-2024/DeepVariant_vcfs/NA24385-Z0027.annotated.AF.vcf.gz
DOI: 10.6084/m9.figshare.25959403.v2
title: <i>Vibration Sensor Dataset for Estimating Fan Coil Motor Health</i>

description: <i>To enhance the field of continuous motor health monitoring, we present FAN-COIL-I, an extensive vibration sensor dataset derived from a Fan Coil motor. This dataset is uniquely positioned to facilitate the detection and prediction of motor health issues, enabling a more efficient maintenance scheduling process that can potentially obviate the need for regular checks. Unlike existing datasets, often created under controlled conditions or through simulations, FAN-COIL-I is compiled from real-world operational data, providing an invaluable resource for authentic motor diagnosis and predictive maintenance research. Gathered using a high-resolution 32KHz sampling rate, the dataset encompasses comprehensive vibration readings from both the forward and rear sides of the Fan Coil motor over a continuous two-week period, offering a rare glimpse into the dynamic operational patterns of these systems in a corporate setting. FAN-COIL-I stands out not only for its real-world applicability but also for its potential to serve as a reliable benchmark for researchers and practitioners seeking to validate their models against genuine engine conditions.</i>
DOI: 10.6084/m9.figshare.988376_d252
title: Participant 8 in the WAY-EEG-GAL dataset.  328 grasp-and-lift trials with different weights and surfaces during which EEG, EMG, kinematics, and kinetics were recorded.

description: WAY-EEG-GAL is a dataset designed to allow critical tests of techniques to decode sensation, intention, and action from scalp EEG recordings in humans who perform a grasp-and-lift task. Twelve participants performed lifting series in which the object’s weight (165, 330, or 660g), surface friction (sandpaper, suede, or silk surface), or both, were changed unpredictably between trials, thus enforcing changes in fingertip force coordination. In each of a total of 3,936 trials, the participant was cued to reach for the object, grasp it with the thumb and index finger, lift it and hold it for a couple of seconds, put it back on the support surface, release it, and, lastly, to return the hand to a designated rest position. We recorded EEG (32 channels), EMG (five arm and hand muscles), the 3D position of both the hand and object, and force/torque at both contact plates.
DOI: 10.17632/7mtt5k66k9
title: Dataset for metagenomics profiling of microbial communities grown in constructed wetland-microbial fuel cell system during sewage wastewater treatment

description: Sewage wastewater is a toxic waste generated from domestic, industrial, and stormwater sources and contains complex organic materials that challenge treatment and disposal. Constructed wetland-microbial fuel cell (CW-MFC) technology has emerged as an eco-sustainable solution, enhancing wastewater remediation while generating bioelectricity. To explore microbial community roles in SWW treatment and bioelectricity generation using lab-scale Canna indica-based CW-MFC, metagenomic profiling was conducted on sludge samples collected from the root zone (RSS) and cathode (CSS). High-throughput sequencing of the V3–V4 hypervariable region of 16S rRNA genes revealed diversity, composition, and functional roles of microbial communities in CW-MFC treating SWW. DNA extraction was performed using the Nucelospin Soil kit, followed by library preparation, purification, and sequencing on the Illumina MiSeq PE300 platform. Bioinformatics tools, such as FastQC, Trimmomatic, FLASH, and DADA2 were employed to process raw sequencing data into high-quality reads. Furthermore, taxonomic analysis revealed Proteobacteria dominance at the phylum level in both RSS and CSS. Functional predictions through PICRUSt2 revealed degradative and metabolic pathways, genes, and proteins. The present dataset consists of raw and high-quality next-generation sequencing data files, OTU, pie charts, and featured tables of the analysed microbial communities. In addition, it also consists of the analyzed rarefaction curve, heat map, Krona chart, KEGG annotation, COG annotation, EC annotation, and MetCyc annotation reports. The study highlights significant differences in microbial diversity and taxonomic abundance between rhizospheric and cathodic samples, offering insights into microbial roles in SWW treatment and bioelectricity production in developed CW-MFC systems.
DOI: 10.17632/cjhbng3rn3
title: Class Discussion and Engagement

description: This data was collected to investigate relationships between student engagement and equity of participation in class discussions for high school students. For equity of participation, this data used an application named "Equity Maps," which collects the equity of class participation for the Time Spoken, the Number of Times Spoken, and the Equity Quotient. Moreover, this data includes student responses to a modified Classroom Engagement Inventory (CEI) that consisted of nine questions: three that targeted Affective Engagement, three that targeted Behavioral Engagement, and three that targeted Cognitive Engagement. This data consists of 16 discussions across four teachers (four discussions per teacher).
DOI: 10.6084/m9.figshare.26511202.v1
title: ConR clinical and demographic data

description: We conducted a randomized, double-blind, placebo-controlled crossover trial comparing the effects of 1200 mg/day of coenzyme Q10 (CoQ10) or 1000 mg/day of nicotinamide riboside (NR) supplementation to placebo in 25 people with CKD (eGFR &lt;60mL/min/1.73 m2). We assessed changes in blood transcriptome using 3'-Tag-Seq gene expression profiling and changes in pre-specified secondary outcomes of inflammatory and oxidative stress biomarkers. For a subsample of participants (n=14), we assessed lymphocyte and monocyte bioenergetics using an extracellular flux analyzer.
DOI: 10.17632/b32nw6rrfh
title: Addressing the pervasive scarcity of structural annotation in eukaryotic algae

description: [Description]
Predicted gene sets using Braker-EP and Braker-ES for 
(i) unannotated_135.tar.gz: 135 eukaryotic algal genome assemblies without structural annotations 
(ii) qualified_45.tar.gz: 45 high-quality eukaryotic algal genome assemblies used for benchmark
(iii) published_genome_sequences: 210 publicly available genome sequences (nucleotide fasta) used in this study.

[Instruction]
(i) Decompress the compressed files
 tar -xvzf unannotated_135.tar.gz
 tar -xvzf qualified.tar.gz

(ii) Find the files you want
 gff3-formatted structural annotation = GENOME_IDENTIFIER.BRAKER_METHOD_USED.gff
 coding sequence nucleotide fasta = GENOME_IDENTIFIER.BRAKER_METHOD_USED.cds.fna
 protein sequence fasta = GENOME_IDENTIFIER.BRAKER_METHOD_USED.faa

[Disclosure] 
This data was cleared for public release by the Los Alamos National Laboratory (LA-UR-21-30120).
DOI: 10.6084/m9.figshare.12662720.v1
title: ApRES data from Totten Ice Shelf

description: ApRES data from the Totten Ice Shelf, site TI05, as published in Vaňková et al. Please cite the following paper if using this data:<br><br>Vaňková I., S. Cook, J. Paul Winberry, K. W. Nicholls, B. K. Galton-Fenzi (2021). Deriving melt rates at a complex ice shelf base using in-situ radar: Application to Totten Ice Shelf. Geophysical Research Letters.
DOI: 10.6084/m9.figshare.13359101.v1
title: Calibrating the marine turbidite paleoseismometer using the 2016 Kaikōura earthquake

description: Core sedimentological (bulk density, grainsize and geochemistry) and modelled ground motion datasets
DOI: 10.6084/m9.figshare.23614428.v1
title: Additional 1.xls

description: Clinical Plasma Cells-related Genes to Aid Therapy in Colon Cancer, additional file.
DOI: 10.6084/m9.figshare.4657195.v3
title: Earth Analytics R: Week 6 - Intro to spectral remote sensing data to understand fire

description: Fire remote sensing data including<br><br>Landsat data<br>Modis Data<br>NAIP data<br><br>for the 2016 Coldsprings fire location near Nederland in Colorado. July 2016.<br>
DOI: 10.17632/yvb7khhbrj
title: Performance and emissions data of an internal combustion engine operating with different ethanol/water mixtures and compression ratios

description: Performance and emissions data of an Otto cycle mono-cylinder combustion engine operating with two different compression rates and several mixtures of anhydrous ethanol fuel and water. Characteristic engine performance parameters and emission fractions from its exhaust system were acquired from 2,000 rpm to 4,000 rpm with fuel mixtures of up to 50% water content.
DOI: 10.6084/m9.figshare.27186171.v1
title: Older People’s Continuance Intention toward Smart Locks: A Quantitative Study Using the Expectation-Confirmation and Task-Technology Fit Models

description: As the global population ages, smart care solutions like smart locks are increasingly important, yet their adoption by older people remains low. The challenge lies not only in initial adoption but in sustaining long-term use. Most research has focused on pre-adoption behavior, with little attention given to older people’s continuance intention toward smart locks. This study is the first to apply the Expectation-Confirmation and Task-Technology Fit Models to investigate older people’s continuance intention toward smart locks, filling a key gap in the literature. By examining factors influencing continuance intention and integrating the specific characteristics of older people and smart locks, this research develops a comprehensive model.
DOI: 10.17632/3whjsxns4n
title: ASASCND

description: Antifragile, sustainable and agile supply chain network design by considering resiliency, robustness, risk and environmental requirements
DOI: 10.17632/98z3tm94zg
title: Data for：Unveiling adaptation strategies of woody plants in remnant forest patches to spatiotemporal urban expansion through leaf trait networks

description: This data set contains all data used for analyzing the influences of temporal and spatial characteristics of urbanization on leaf trait networks of woody plants in urban remnant forests in Guiyang, China. It includes urban expansion indicators surrounding remnant patches, network overall parameters and network node parameter (degree) in 30 samples.
DOI: 10.17632/dg7tb8wdpm
title: SUPPLEMENTAL MATERIAL: Autologous Cell Harvesting Device Provides Repigmentation and Improves Quality-of-Life for Patients with Stable Vitiligo Lesions in a Large and Diverse Patient Population: A Pre-post Study

description: Supplemental tables and figures for the manuscript titled: "Autologous Cell Harvesting Device Provides Repigmentation and Improves Quality-of-Life for Patients with Stable Vitiligo Lesions in a Large and Diverse Patient Population: A Pre-post Study"
DOI: 10.6084/m9.figshare.16556730.v1
title: NGS_nanobodies

description: Nanobodies from NGS.
DOI: 10.6084/m9.figshare.27158679.v2
title: Orthologous genes of <i>Tribolium </i><i>castaneum</i> and <i>Drosophila </i><i>melanogaster</i>

description: These datasets are the result of the identification of orthologous genes between <i>Tribolium</i> and <i>Drosophila</i>.
DOI: 10.6084/m9.figshare.3554721.v1
title: Appendix G. Comparisons of size- and coverage-based species accumulation curves.

description: Comparisons of size- and coverage-based species accumulation curves.
DOI: 10.6084/m9.figshare.4290875.v2
title: Linear Distributed Source Modeling of Local Field Potentials Recorded with Planar Intra-Cortical Arrays

description: This is local field potential data from a planar 8x8 Utah array in primary visual cortex recorded from an awake behaving macaque monkey. The data is organized in the Fieldtrip format (http://www.fieldtriptoolbox.org/reference/ft_datatype_raw) and can be loaded into MATLAB. Visual stimuli where presented while the monkey was fixating on a fixation spot.
DOI: 10.6084/m9.figshare.5134981.v1
title: LEGO Sets Composition

description: This is the inventories of LEGO sets.
DOI: 10.6084/m9.figshare.9777635.v1
title: Supplementary Material for: Health-Related Quality of Life in Patients with Moderate to Severe Ulcerative Colitis: Surgical Intervention versus Immunomodulatory Therapy

description: <b><i>Purpose:</i></b> Ulcerative colitis (UC) can be managed with immunomodulation or surgery. We aimed to understand whether these strategies had a different impact on patients’ health-related quality of life (HRQoL). <b><i>Methods:</i></b> This was a retrospective, cross-sectional study: patients who had a moderate to severe UC episode that prompted the utilization of immunomodulatory drugs or surgery were invited to complete a generic (short form [36] health survey [SF-36]) and a disease-specific (inflammatory bowel disease questionnaire [IBDQ]) survey. <b><i>Results:</i></b> We included 157 patients, 65 (41.4%) surgically treated. The therapeutic procedure had a minimal impact on HRQoL: only the social dimension of the IBDQ and the physical function component of the SF-36 were significantly different between the study arms – lower for the surgically treated patients. The type of surgery had no impact, but the occurrence of pouchitis, namely, in a chronic form, was associated with a lower HRQoL. Regression analysis confirmed surgery as an independent predictor of lower scores in the social dimension of the IBDQ (–4.646, 95% CI –6.953 to –2.339) and in the physical functioning (–9.622, 95% CI –17.061 to –2.183) and physical role functioning (–3.669, 95% CI –7.339 to 0.001) dimensions of the SF36. <b><i>Conclusions:</i></b> Although usually feared by patients, surgery has a limited impact on UC patients HRQoL when compared to medical management with immunomodulatory drugs.
DOI: 10.17632/cww6zkdcmb
title: Cabbage_Eggplant_combined_Hyperspectral_dataset

description: Cabbage and eggplant crops combined hyperspectral data was acquired using a terrestrial hyperspectral imaging spectroradiometer.
DOI: 10.17632/xfnd3hw4d8
title: On the Requirements for Inferring Aquifer‐Scale T and S in Heterogeneous Confined Aquifers

description: ooo
DOI: 10.6084/m9.figshare.20128343.v1
title: Asymmetric Rectangular Patch Antenna Array S-parameter Simulation.txt

description: <strong>Simulated S-parameter of the proposed asymmetrical patch antenna array.</strong>
DOI: 10.6084/m9.figshare.25739277.v1
title: Nitrogen fixation may not alleviate stoichiometric imbalances that limit primary production in eutrophic lake ecosystems

description: Mesocosm experiment with four N:P molar treatment levels (2.2, 16, 55, 110), sampled in triplicate over three years. Please refer to README file provided for more information.
DOI: 10.6084/m9.figshare.26035948.v1
title: Control experiment: scRNA-seq of P32 CellTagged skin APCs, Cebpa-DN is not used

description: 24,784 cells. Cells were isolated from P21 mouse skin adipose tissue, CellTagged, and transplanted into the mouse skin adipose tissue of a P21 mouse. Cells were sequenced at P32. Importantly, this dataset differs from others in this project as Cebpa-dn was not used. Cebpa-dn normally blocks terminal differentiation of APCs.
DOI: 10.6084/m9.figshare.26140027.v1
title: SURAT SLUMS-WARDWISE COVID DATA

description: Urban slums are hotspots of infectious diseases like COVID-19 as was seen in the waves of 2020 and 2021. One of the primary reasons why slums are disproportionately affected is their location in inaccessible and uninhabitable zones, crowded and poorly ventilated living spaces, unsanitary conditions and common facilities (water taps, common toilets, etc.). Staying at home during pandemics is hardly an option for slum dwellers as it often means giving up work and even basic necessities. This paper aims to understand the habitat vulnerabilities of slums in the two Indian megacities of Pune and Surat which were the worst hit during both waves. The study is done at the level of wards, which is the smallest administrative boundary, taking the habitat vulnerability (congestion and access to basic services). To identify the explanatory variables which increase the vulnerability of slums to infectious diseases, literature study is done on the triggering factors which affect habitat vulnerability derived from common characteristics and definitions of slum. The aim of the research is to categorize the slums into 3 levels of risk zones and map them subsequently. This study will help in formulating a model to prioritize the allocation of sparse resources in developing countries to tackle the habitat vulnerabilities of the slum dwellers especially during health emergencies of contagious diseases like COVID-19.