cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/g7v69f77gj
title: Chicken eggs' consumption in Brazil

description: This database is from a research that focuses on the structure of consumer preferences for chicken eggs – a category increasingly influenced by sustainable considerations – to identify how strongly sustainable features shape individuals’ choices compared to other criteria. 550 Brazilian consumers answered a self-administered online survey containing a 12-items goal-orientated scale to identify consumers’ main goal frame, followed by a choice experiment with 12 repeated alternatives for egg choice. The choice design considered five egg attributes: Production System (Poultry farm/Cage-Free), Tray Material (Plastic/Cardboard/Styrofoam), Point of Purchase (Growers Market/Neighborhood Store/Supermarket), Label (No Label/Organic Label/Animal Well-being Label) and Price (three levels). Respondents had to think of a hypothetical purchase of a 10-egg units pack, considering diverse alternative features.
DOI: 10.17632/rryyvwbn7g
title: Data for: Rapid in situ measurements of algal cell concentrations using an artificial neural network and single-excitation fluorescence spectrometry

description: Algae Fluorescence and Algae Cell Concentration
DOI: 10.6084/m9.figshare.24217257.v1
title: Prod e Fitoq

description: Prod e fitoq seve cultivars
DOI: 10.6084/m9.figshare.28506524.v1
title: Supplementary Material for: Doppler Assessment of the Uterine Arteries is a Valuable Adjunct Tool for the Evaluation of Efficacy of Gonadotropin-Releasing Hormone Agonist Therapy in Girls with Central Precocious Puberty

description: Introduction: Pelvic ultrasound has been studied for the follow-up of girls with precocious puberty during gonadotropin-releasing hormone agonists (GnRHa) therapy. The addition of Doppler evaluation of uterine arteries needs to be further investigated. We aimed to evaluate the accuracy of the uterine artery pulsatility index (PI) for monitoring GnRHa therapy in girls with precocious puberty.
Methods: This is a retrospective cohort study of girls with central precocious puberty (CPP) and early and fast puberty (EFP) treated with GnRHa. We included girls who underwent pelvic ultrasound and Doppler imaging of the uterine arteries before and during therapy. Analyses included uterine artery PI and uterine, endometrial, and ovarian measurements. Receiver operating characteristic (ROC) curves with cutoffs determined by the Youden index were used for data analysis.
Results: In total, 28 pairs of PI measurements (54% of girls with CPP, 46% with EFP) before and during GnRHa therapy were included in the paired-sample analysis. The median duration of treatment at the time of ultrasound was 11.5 (7; 19) months. The mean PI was significantly higher during GnRHa therapy than at baseline (6.5 ± 1.8 vs. 4.0 ± 1.6, respectively, P &lt; 0.001). A total of three girls met clinical and laboratory criteria for treatment failure. ROC curve analysis showed that the PI was able to identify an effective GnRHa therapy with a mean area under the curve (AUC) of 0.967 ± 0.04 (P &lt; 0.001), and the PI cutoff point of 5.4 held a sensitivity of 84%, specificity of 100%, and accuracy of 86%.
Conclusion: We found a significant increase in the PI during GnRHa therapy, which reflects higher resistance in the blood flow to the uterus, indicating effective pubertal hormone suppression.
DOI: 10.6084/m9.figshare.5439991.v1
title: CVD Risk Prediction Synthetic Dataset

description: This is a synthetic dataset to teach students about using clinical and genetic covariates to predict cardiovascular risk in a realistic (but synthetic) dataset.<br>For the workshop materials, please go here: https://github.com/laderast/cvdNight1Contents:1) dataDictionary.pdf - pdf file describing all covariates in the synthetic dataset.2) fullPatientData.csv - csv file with multiple covariates3) genoData.csv - subset of patients in fullPatientData.csv with additional SNP calls.<br>
DOI: 10.17632/6z7ks95jyt
title: SWS-dataset

description: The data for S-wave splitting in the upper crust. The paper is "Rigid widths of active block boundary faults and crustal layered anisotropy in the intersection of faults Honghe and Xiaojiang in the SE margin of the Tibetan plateau" .
DOI: 10.6084/m9.figshare.20171264.v1
title: Data on perceptions of students towards online learning in medical education

description: This dataset has responses from medical students' perceptions of online teaching during the Covid-19 pandemic. A questionnaire was used to collect responses from medical students and a focused group discussion(FGD)guide was used for conducting the FGDs.
DOI: 10.6084/m9.figshare.20523906.v3
title: Using visualization science to inform redesigning environmental decision support tools: a case study of the USGS WaterWatch

description: This dataset includes the results of evaluating 1,067 survey participants' understanding and efficiency at identifying hydrologic anomalies in map-based display. Users were tasked with identifying maps with two colormaps: rainbow and divergent brown-blue. In addition, users' preference of the two colormaps were evaluated. The surveys were administered in November and December of 2020. The two surveys administered to collect the data included in this dataset are included as an appendix to the dataset. Purpose: These data were collected to answer the following research questions: RQ1: Do users have preconceived beliefs about how colors map to streamflow levels? RQ2: Does switching from the rainbow to brown-blue colormap affect the understandability of WaterWatch maps? RQ3: Is understandability enhanced by introducing users to the colormap legend? RQ4: Does switching from the rainbow to brown-blue colormap affect the efficiency of WaterWatch maps? RQ5: Is efficiency enhanced by introducing users to the colormap legend? RQ6: Do user preferences for the rainbow or brown-blue colormap align with objective measures of performance?
DOI: 10.6084/m9.figshare.24230326.v1
title: Propensity score data

description: Data used for propensity score density graphs. Minimal, aggregated dataset from TriNetX.
DOI: 10.6084/m9.figshare.27688128.v1
title: Mangrove and estuary DIC and TAlk database

description: Database containing mangrove DIC and TAlk concentration data and estuary survey DIC and TAlk concentration data associated with the publication Rosentreter & Eyre (GBC).
DOI: 10.6084/m9.figshare.3544124.v1
title: Appendix A. A figure showing that FDiv and FEve do not estimate functional dispersion.

description: A figure showing that FDiv and FEve do not estimate functional dispersion.
DOI: 10.6084/m9.figshare.24257317.v1
title: Hyperspectral images of Marchantia polymorpha under nutrient stress

description: Plant material and growth condition – M. polymorpha gemma (Accession: Tak-1) was spread on ½ x B-5 medium (PhytoTechnology Laboratories) with 1% agar and grown at 22oC under continuous light (50–60 µmol m−2 s−1). Seven-day old gemmalings were then transferred to full-strength Yamagami (cntl) medium 12 or the same medium with the reduced concentration of 0 or 3 mM potassium nitrate and 0 or 2mM sodium nitrate (0xN or 0.05xN), 0 or 1 mM potassium phosphate (0xP or 0.05xP) , 0.1 or 0.2 mM calcium chloride (0.05xCa or 0.1xCa), 0 or 0.43 µM iron sulfate (0xFe or 0.05xFe) and 0 mM magnesium sulfate (0xMg). The gemmalings were grown at 22oC under a 24-hr continuous light during nutrient deficiency treatment. RGB and hyperspectral images were captured on the 14th day of treatment. Full strength Yamagami nutrient medium contained 2 mM magnesium sulfate, 2 mM potassium dihydrogen phosphate, 6 mM potassium nitrate, 1 mM ammonium chloride, 2 mM calcium chloride, 4 mM sodium nitrate, 8.6 µM iron (II) sulfate, 10.3 µM manganese (II) sulfate, 30 µM boric acid, 1 µM zinc sulfate, 1 µM cupric sulfate, 130 nM cobalt sulphate, 24 nM sodium molybdate. Hyperspectral imaging - Hyperspectral images of M. polymorpha plants were captured using the Specim IQ camera (SPECIM) with halogen lamps as the light source. The hyperspectral image contains 512 x 512 pixels (x, y) and 204 spectral bands (λ) from 400 to 1000 nm with a spectral resolution of 7 nm. The white balance was set according to the manufacturer protocol with the interrogation time 35 s. The interrogation time for the samples was set to 40 s and the working distance was set to 23 cm.
DOI: 10.17632/56rmx5bjcr
title: Knee Osteoarthritis Severity Grading Dataset

description: This dataset contains knee X-ray data for both knee joint detection and knee KL grading. The dataset is organized from OAI (https://oai.epi-ucsf.org/datarelease/).
DOI: 10.6084/m9.figshare.1053062.v1
title: Timmed and clean reads (a)

description: Timmed and clean reads
DOI: 10.6084/m9.figshare.24511927.v3
title: All data

description: In this work, a multibody system dynamics model of a battery pack is constructed based on the recursive idea, which can characterize the state information of each cell, such as velocity, acceleration, deformation, etc., during extrusion. By utilizing machine learning techniques, it is possible to achieve both the forward and reverse design of the adhesive for the battery pack. This enables accurate prediction of battery deformation under various adhesive stiffness and damping coefficients, as well as different battery SOCs. Consequently, the design of the battery adhesive can be guided, resulting in minimal distortion of the battery pack during extrusion and reducing the risk of internal short circuits.
DOI: 10.6084/m9.figshare.5234593.v1
title: Genotype data on: Genetic affinities of the Jewish populations of India

description: IMP! Data of 10 Indian Jewish (Cochin Jew) samples for academic use only. The data is generated on Affymatrix 6.0 platform.The data files are in PLINK binary ped (bed) file format.If you want to use the data please send an email to thangs@ccmb.res.in with a copy to gyanc@ebc.ee by following statements-• I agree that I'll use these data only for research purposes.• I'll make no commercial use of these data.• I'll not transfer these data, in whole or in part, to anyone other than persons in my own research group. • I understand internationally-accepted policies of responsible use of data for research and data-sharing, and shall abide by these policies.• I'll not use this data for medical related analysis.• I agree that I'll not use the dataset, either independently or in combination with any other genetic or non-genetic information, to (a) identify or contact individual participants, or (b) identify or contact individuals who may be related to the participants.<br><br><br><br><br>
DOI: 10.17632/r8m4y7rv8j
title: Mechanical, physical and chemical characterisation of mycelium-based composites with different types of lignocellulosic substrates

description: The current physical goods economy produces materials by extracting finite valuable resources without taking their end of the life and environmental impact into account. Mycelium-based materials offer an alternative fabrication paradigm, based on the growth of materials rather than on extraction. Agricultural residue fibres are inoculated with fungal mycelium, which form an interwoven three-dimensional filamentous network binding the feedstock into a lightweight material. The mycelium-based material is heat-killed after the growing process. In this paper, we investigate the production process, the mechanical, physical and chemical properties of mycelium-based composites made with different types of lignocellulosic reinforcement fibres combined with a white rot fungus, Trametes versicolor. This is the first study reporting the dry density, the Young’s modulus, the compressive stiffness, the stress-strain curves, the thermal conductivity, the water absorption rate and a FTIR analyse of mycelium-based composites by making use of a fully disclosed protocol with T. versicolor and five different type of fibres (hemp, flax, flax waste, softwood, straw) and fibre processings (loose, chopped, dust, pre-compressed and tow). The thermal conductivity and water absorption coefficient of the mycelium composites with flax, hemp, and straw have an overall good insulation behaviour in all the aspects compared to conventional materials such as rock wool, glass wool and extruded polystyrene. The conducted tests reveal that the mechanical performance of the mycelium-based composites depends more on the fibre processing (loose, chopped, pre-compressed, and tow), and size than on the chemical composition of the fibres. These experimental results show that mycelium-composites can fulfil the requirements of thermal insulation.
DOI: 10.6084/m9.figshare.25399807.v1
title: EcoPlate data

description: OD measurements of single carbon source consumption in BIOLOG EcoPlates inoculated with water from Lake Zurich. We provide separate files for each sampling (S1/S2/S3 for three sampling campaigns from September to November 2021). We distinguish between syringe samples (collected in syringes arranged at horizontal cm distances) and mixed samples (collected from homogenized 5 litres of lake water). The complete sample volumes of 9 mL lake were distributed over one EcoPlate.General file explanations: Syringe sampling was repeated 3 times within each sampling, the repetitions are recorded by "run" (1/2/3) within the files. For mixed samples "run" is specified as "MIX". "SyringeID" (1-10) refers to the 10 separate syringe or mixed samples collected within each run. Each sample distributed over one EcoPlate has an individual "plate" ID composed of the run and syringeID.Ecoplate_data files: OD595 = originally recorded OD. ODcorrected = OD595 after subtracting t0 values. binary = positive (1) or negative (0) carbon source consumption with cutoff value of OD &gt; 0.25. These files also provide an overview of which single carbon sources are provided in the EcoPlates.SR_data files: Substrate richness (SR) for each plate and sampling shows how many substrates (out of the 31 single carbon sources + control well) were consumed.<br>
DOI: 10.6084/m9.figshare.4530797.v1
title: Supplementary Material for the paper "Learning Discriminative Features from Electroencephalography Recordings by Encoding Similarity Constraints" (ICASSP 2017)

description: Supplementary Material for the paper: Sebastian Stober: <i>"Learning Discriminative Features from Electroencephalography Recordings by Encoding Similarity Constraints."</i> In: Proceedings of the 42nd IEEE International Conference on Acoustics, Speech and Signal Processing<br>(ICASSP'17), 2017.<br>
DOI: 10.6084/m9.figshare.5117476.v1
title: Molecular systematics and biodiversity of the <i>Cryptotis mexicanus</i> group (Eulipotyphla: Soricidae): two new species from Honduras supported

description: Small-eared shrews of the genus <i>Cryptotis</i> (Mammalia: Eulipotyphla: Soricidae) are widespread in the northern Neotropics. Systematic studies of these shrews over the past two decades have revealed previously undocumented morphological and species diversity, resulting in a quadrupling of the number of recognized species. Unfortunately, a small proportion of the species in the genus have been included in molecular phylogenetic studies, and evolutionary relationships within the genus are incompletely known. Traditionally, species have been assigned to four or five morphologically defined ‘species groups’, but tests of the monophyly of some of these groups show weak support and relationships amongst species groups remain somewhat speculative. The largest species group is the <i>C. mexicanus</i> group inhabiting Mexico and northern Central America. We studied sequences from mitochondrial cytochrome-b and 16S genes, as well as nuclear ApoB and BRCA1 genes from 22 species of <i>Cryptotis</i>, including 15 species in the <i>C. mexicanus</i> group. Our combined analysis shows that the <i>C. goldmani</i> subgroup is very weakly supported as monophyletic; however, the <i>C. mexicanus</i> group as a whole is not monophyletic. Our molecular phylogenetic analyses confirm the distinctiveness of two newly described species (<i>C. celaque</i> and <i>C. mccarthyi</i>) from isolated highlands of western Honduras and illustrate their relationship with other species formerly considered part of a widespread <i>C. goodwini</i>.
DOI: 10.6084/m9.figshare.7930520.v1
title: supplementary data

description: Output using the method FcircSEC
DOI: 10.6084/m9.figshare.9912926.v1
title: Supplementary Material for: Proteomic Analysis Reveals Allergen Variability among Breeds of the Dust Mite <b><i>Blomia tropicalis</i></b>

description: <b><i>Background:</i></b> The dawn of the “omics” technologies has changed allergy research, increasing the knowledge and identification of new allergens. However, these studies have been almost restricted to <i>Dermatophagoides</i> spp. Although <i>Blomia tropicalis</i> has long been established as a clinically important source of allergens, a thorough proteomic characterization is still lacking for this dust mite. <b><i>Objective:</i></b> To increase knowledge of <i>B. tropicalis</i> allergens through proteomic analysis. <b><i>Methods:</i></b> Eleven in-bred lineages of <i>B. tropicalis</i> were obtained from 11 unique different pregnant females. Their somatic extracts were analyzed and compared with a commercially available extract by liquid chromatography tandem mass spectrometry (LC-MS/MS). <b><i>Results:</i></b> Considerable differences in the protein expression profiles were found among the breeds, and most of them displayed higher expression levels of major allergens than the commercially available extract. Blo t 2 was the most prominent allergenic protein in the analyzed extracts. Six identified allergens and 14 isoforms have not yet been recognized by IUIS. Conversely, 3 previously recognized <i>B. tropicalis</i> allergens were not found. <b><i>Conclusions:</i></b> The clear impact of inbreeding on allergen content shown by our study leads us to conclude that the quantification and/or identification of allergens from in-bred lines should be routinely considered for mite cultivation in order to select breeds with higher amounts of major allergens. In this sense, LC-MS/MS may be a useful method to achieve this quality control for research and commercial purposes.
DOI: 10.15468/dl.fngmms
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argentina silus (Ascanius, 1775)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((-16.6672 18.7728,-16.5468 17.7486,-16.9133 16.7746,-17.0265 15.925,-17.4754 15.299,-17.9607 15.0106,-18.0159 14.6088,-17.2825 13.9103,-17.2971 12.4437,-17.1163 12.0176,-16.8424 11.8396,-16.9887 11.3363,-16.91 11.0108,-16.709 10.8496,-9.0352 10.8496,-9.0352 19.8496,-16.8896 19.8496,-17.0371 19.3335,-16.6672 18.7728))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013369-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.19095458.v1
title: Supplementary Material for: Characteristics of Cancers in Adolescents and Young Adults Compared with Those in Adults in Their 60s: A Single-Center Experience

description: <b><i>Introduction:</i></b> Cancer is one of the main causes of death among adolescents and young adults (AYAs) aged 15–39 years. The improvement in overall 5-year survival in AYA cancer patients was far below than that of adult cancer patients. The purpose of this study was to clarify the features of cancer in AYAs by comparing them with those of controls. <b><i>Methods:</i></b> Patients in the cancer registry of the University of Tsukuba Hospital between 2007 and 2017 (median age, 65 years) were included in this study. We used patients between the ages of 64 and 66 years as controls. We then obtained the age at diagnosis, sex, primary site, and pathological type. <b><i>Results:</i></b> Among 27,281 cancer patients in the registry between 2007 and 2017, 1,947 (7.1%) patients were categorized into the AYA group, and 2,354 into the control group. Among men in the AYA group, central nervous system (CNS) tumors accounted for 22.7% of all cancers, followed by germ cell tumors, 22.5%, and hematopoietic malignancies, 12.5%. Among women in the AYA group, cervical cancer accounted for 35.9% of all cancers, followed by breast cancer, 14.6%, and CNS tumors, 11.6%. The proportion of specific cancer types relative to all cancers in the CNS, thyroid, adrenal glands, germ cells, cervix uteri, hematopoietic tissues, and sarcomas was higher in the AYA group than that in the control group. <b><i>Conclusion:</i></b> The present results for AYAs were in sharp contrast to those for adult cancers and may be related to different modes of pathogenesis in AYAs. The identification of high-risk groups of these tumors in the AYA generation is crucial for prevention and early detection and will be a major topic for future research. While most of adult cancers are treated independently by each medical department, AYA cancers need to be treated in collaboration with experts from several departments. It is desirable to address the issues involved in applying treatments established for adult cancers to AYA cancers on a cancer-by-cancer basis.
DOI: 10.6084/m9.figshare.20310003.v1
title: Absolute_GeneCopyNumbers_qPCR

description: Raw copy numbers from qPCR for<em> sul1, sul2, intI1</em> and 16S rRNA genes. Sampling dates and sites are indicated, samples were taken from surface waters in the Holtemme river, Germany.
DOI: 10.6084/m9.figshare.20493042.v3
title: CORMS (DATASET): A GitHub and Gerrit based Hybrid Code Reviewer Recommendation Approach for Modern Code Review

description: CORMS DATASET: This dataset contains the reviews mined from GitHub and Gerrit platforms for analysing the performance of MCR techniques.
DOI: 10.6084/m9.figshare.24114381.v1
title: <b>Diverse signatures of convergent evolution in cactus-associated yeasts</b> - supplemental material

description: Supplemental material for the manuscript entitled: <br><b>Diverse signatures of convergent evolution in cactus-associated yeasts</b>
DOI: 10.17632/cjrwdxvxcn
title: ElasT: A toolkit for thermoelastic calculations

description: A toolkit that simplifies the calculation of solid-state elastic properties at finite temperatures to a one-shot task is developed. We report the improvement and automation of the stress-strain method, which relies on the averaged stresses from ab initio or classical calculations. Stresses obtained from strained crystal lattices at zero and finite temperatures can be directly extracted to fit the strain-stress relationship and get the elastic constants. Furthermore, the finite-temperature elastic constants can also be obtained by solving a system of overdetermined linear equations directly under constant pressure dynamics (NPT, NPH, etc.) within the stress-strain method, which does not require the equilibrated lattice as a prior condition. It is shown that the elastic constants converge quickly in constant pressure dynamics. This approach proves to be robust and can significantly reduce computational cost.