cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26008/1912/bco-dmo.816978.1
title: An objective map of global dissolved oxygen anomaly data based on World Ocean Database (2013) from 1950 to 2015

description: An objective map of global dissolved oxygen anomaly data based on World Ocean Database (2013) from 1950 to 2015. These data were published in Ito et al. (2017).
DOI: 10.26008/1912/bco-dmo.776755.4
title: Scientific sampling event log from the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15) from September to November 2018

description: Scientific sampling event log from the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15) from September to November 2018. GP15 was carried out on the R/V Roger Revelle and was split into two legs: RR1814 (Seattle, WA to Hilo, HI) and RR1815 (Hilo, HI to Papeete, French Polynesia).
DOI: 10.26008/1912/bco-dmo.777951.5
title: Bottle file from Leg 1 (Seattle, WA to Hilo, HI) of the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15, RR1814) on R/V Roger Revelle from September to October 2018

description: Bottle data collected by the GTC (GEOTRACES Trace element Carousel) and ODF (Ocean Data Facility) CTD rosettes, underway, and tow fish on the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15). Leg 1 (RR1814) took place from 24 September to 21 October 2018 on R/V Roger Revelle. Data from the different sampling systems was compiled into one file by ODF. For complete acquisition and processing information, refer to the cruise report.
DOI: 10.26008/1912/bco-dmo.842728.1
title: Seawater carbonate chemistry and dissolved oxygen of discrete samples taken in Puget Sound, WA during R/V Clifford A. Barnes cruises CB1073 and CB1078 in 2017.

description: Seawater carbonate chemistry and dissolved oxygen of discrete samples taken in Puget Sound, WA during R/V Clifford A. Barnes cruises CB1073 and CB1078 in 2017.
DOI: 10.26008/1912/bco-dmo.842831.1
title: Depth-stratified krill net samples taken in Puget Sound, WA aboard R/V Clifford A. Barnes during cruises CB1073 and CB1078 in 2017.

description: Depth-stratified krill net samples taken in Puget Sound, WA aboard R/V Clifford A. Barnes during cruises CB1073 and CB1078 in 2017.
DOI: 10.26008/1912/bco-dmo.845755.1
title: Database summarizing independent studies of nekton taxa associated with oyster reefs

description: This dataset summarizes independent studies of nekton taxa associated with oyster reefs off of the Atlantic and Gulf Coasts of the United States.
DOI: 10.26008/1912/bco-dmo.840626.2
title: Physiological observations of Euphausia pacifica sampled in Puget Sound, WA aboard R/V Clifford A. Barnes during cruises CB1073 and CB1078 in 2017.

description: Physiological observations of Euphausia pacifica sampled in Puget Sound, WA aboard R/V Clifford A. Barnes during cruises CB1073 and CB1078 in 2017.
DOI: 10.26008/1912/bco-dmo.842972.1
title: CTD profiles acquired in Puget Sound, WA aboard R/V Clifford A. Barnes during cruises CB1073 and CB1078 in 2017.

description: CTD profiles acquired in Puget Sound, WA aboard R/V Clifford A. Barnes during cruises CB1073 and CB1078 in 2017.
DOI: 10.26008/1912/bco-dmo.718711.1
title: Site information for R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013 (PelagicHypoxia project)

description: Site information for R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013.
DOI: 10.26008/1912/bco-dmo.835968.1
title: Photobehavior for octopus (‘Octopus bimaculatus’) and squid (‘Doryteuthis opalescens’) paralarvae during exposure to 9 light irradiance levels and 4 oxygen conditions in trials conducted in April of 2019

description: This dataset gives the results of photobehavior experiments under different oxygen conditions in larvae of the market squid (‘Doryteuthis opalescens’) and two-spot octopus (‘Octopus bimaculatus’). Photobehavior experiments were conducted to determine whether the impairment of visual physiology observed in marine invertebrate larvae (McCormick et al., 2019) is subsequently affecting visual behavior in marine larvae.
DOI: 10.26008/1912/bco-dmo.842922.1
title: Seawater conditions monitored and recorded during two separate laboratory experiments in 2017 to acclimate krill to dissolved oxygen (DO) or pH conditions.

description: Seawater conditions monitored and recorded during two separate laboratory experiments in 2017 to acclimate krill to dissolved oxygen (DO) or pH conditions.
DOI: 10.26008/1912/bco-dmo.718649.1
title: Survey locations and times for R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013 (PelagicHypoxia project)

description: Survey locations and times for R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013.
DOI: 10.26008/1912/bco-dmo.718675.1
title: Fish and jellyfish stomach contents from R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013 (PelagicHypoxia project)

description: Fish and jellyfish stomach contents from R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013
DOI: 10.26008/1912/bco-dmo.718662.1
title: Trawl catch composition from R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013 (PelagicHypoxia project)

description: Trawl catch composition from R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013.
DOI: 10.26008/1912/bco-dmo.718698.1
title: Fish and jellyfish sample data from R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013 (PelagicHypoxia project)

description: Fish and jellyfish sample data from R/V Centennial trawl surveys in the Hood Canal, WA from 2012-2013
DOI: 10.26008/1912/bco-dmo.844993.1
title: Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents from 1998-2017

description: Functional traits of colonists collected from colonization surfaces at the East Pacific Rise (EPR) deep-sea vents (1998-2017) (Dykman et al., 2021). A dataset of trait modality assignments for 8 functional traits of 58 invertebrate species or higher taxa (when species ID was uncertain) collected from colonization surfaces deployed at hydrothermal vents at 9° 50’N on the East Pacific Rise.
DOI: 10.26008/1912/bco-dmo.647250.4
title: Dissolved cobalt concentrations measured by cathodic stripping voltammetry from the MetZyme cruise KM1128 on R/V Kilo Moana in October 2011

description: This dataset includes dissolved cobalt concentrations measured by cathodic stripping voltammetry. Samples were collected during the KM1128 METZYME research expedition (Metals and Enzymes in the Pacific) on the R/V Kilo Moana October 1-25, 2011 from Oahu, Hawaii to Apia, Samoa.
DOI: 10.26008/1912/bco-dmo.826448.1
title: Discrete raw measurements from upwelling experiments conducted on two phytoplankton species isolated from the California Upwelling Zone

description: Two phytoplankton species, Chaetoceros decipiens (UNC1416) and Emiliania huxleyi (UNC1419), were cultured at 12 °C in artificial Aquil* medium using trace metal clean (TMC) techniques. Macronutrients were supplied such that nitrate would become limiting for growth (50 μmol L⁻¹ NO3, 10 μmol L⁻¹ PO4, 200 μmol L⁻¹ H4SiO4) and two iron treatments were used (1370 nmol L⁻¹ and 3.1 nmol L⁻¹ total Fe). Upwelling conveyor belt cycle (UCBC) simulations were performed by transitioning the cultures to different nutrient and light regimes. They were grown by first growing the cultures with ample light (115 µmol photons m⁻² s⁻¹) until nitrate depletion and stationary growth. Cultures were then moved to no light for 10 days to simulate the sinking out of the euphotic zone. After this dark period, the cultures were subsequently transferred back to fresh medium under ambient light levels, and grown until stationary phase again. Samples were collected for six different time points associated with the different phases throughout the simulated upwelling cycle. This dataset includes the treatment information, replicate IDs, and the discrete raw measurements made for the upwelling experiments.
DOI: 10.26008/1912/bco-dmo.836648.1
title: Remotely-generated submesoscale coherent vortices (SCV) within Argo profiles

description: Remotely-generated submesoscale coherent vortices (SCV) within Argo profiles. The data reveal the date, locations, and identification information of Argo profiles that pierced spicy-core (anomalously warm and salty) and minty-core (anomalously cold and fresh) SCVs. We also include statistics gathered for each SCV, such as core water mass characteristics and height/length scales. These data are described in McCoy et al. (2020); doi: 10.1016/j.pocean.2020.102452
DOI: 10.26008/1912/bco-dmo.826494.1
title: NCBI project accession and library information on each sample analyzed in upwelling experiments conducted on two phytoplankton species isolated from the California Upwelling Zone

description: Two phytoplankton species, isolated from the California Upwelling Zone - Chaetoceros deicipiens (UNC1416) and Emiliania Huxleyi (UNC1419) - were cultured at 12 degrees Celsius in artificial Aquil* medium using trace metal clean (TMC) techniques. Upwelling conveyor belt cycle (UCBC) simulations were performed by transitioning the cultures to different nutrient and light regimes. RNA transcriptome libraries were created using the Illumina TruSeq Stranded mRNA Library Preparation Kit for C. dicipiens, and the KAPA stranded mRNA-Seq kit for Illumina platforms for E. huxleyi. Samples were sequenced on an Illumina MiSeq. This dataset includes the NCBI project accession and library information on each sample analyzed in the upwelling experiments.
DOI: 10.26008/1912/bco-dmo.844868.1
title: Sample and treatment information for the environmental metagenome of paired bleaching and nonbleaching Pocillopora cf. meandrina corals in Mo'orea, French Polynesia in March of 2016

description: Sample and treatment information for the environmental metagenome of paired bleaching and nonbleaching Pocillopora cf. meandrina corals in Mo'orea, French Polynesia in March of 2016. All sequences are available in the Short Read Archive (SRA) at The National Center for Biotechnology Information (NCBI)under BioProject PRJNA647466 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA647466).
DOI: 10.26008/1912/bco-dmo.701863.2
title: Demographic data from introduced crab in Seadrift Lagoon 2009-2019

description: Demographic data from introduced crab in Seadrift Lagoon (Central California coast, shallow subtidal (&lt;3 m depth)) from 2009 to 2019.
DOI: 10.26008/1912/bco-dmo.832389.1
title: Bottle data and chemical analysis from Falkor cruise FK180624 in the Eastern Tropical North Pacific Ocean in 2018

description: Bottle data and chemical analysis from Falkor cruise FK180624 in the Eastern Tropical North Pacific Ocean in 201
DOI: 10.26008/1912/bco-dmo.839476.1
title: Sampling locations and identifications for larvae collected near three deep-sea hydrothermal vent fields from 2007 to 2017

description: This dataset provides the sampling locations and identifications for larvae collected near three deep-sea hydrothermal vent fields and used in a microbiome study by Carrier et al. (2020, submitted). This dataset provides metadata for larval and microbiome genetic sequence data in another repository (Carrier et al., 2020, doi.org/10.5061/dryad.sqv9s4n18). The data table is structured as a Darwin Core occurrence table so that it can be harvested by the Ocean Biodiversity Information System (OBIS) and Global Biodiversity Information Facility (GBIF). In addition to the data table, photographs are provided for some of the specimens.
DOI: 10.26008/1912/bco-dmo.701751.2
title: Demographic data for introduced crab from multiple bays along the Central California coast in 2009-2016

description: Demographic data for introduced crab from multiple bays along the Central California coast, shallow subtidal (&lt;3 m depth), from 2009-2016.
DOI: 10.26008/1912/bco-dmo.701840.2
title: Mark recapture data for introduced crab in Seadrift Lagoon 2011-2018

description: Mark recapture data for introduced crab in Seadrift Lagoon (Central California coast, shallow subtidal (&lt;3 m depth)) from 2011 to 2018.
DOI: 10.26008/1912/bco-dmo.828767.1
title: CTD and underwater mass spectrometer data acquired in 2017  aboard the RV/Endeavor (cruise EN602) in the the subtropical Atlantic using a Triaxus tow vehicle.

description: CTD and underwater mass spectrometer data acquired in 2017  aboard the RV/Endeavor (cruise EN602) in the the subtropical Atlantic using a Triaxus tow vehicle.
DOI: 10.26008/1912/bco-dmo.842974.1
title: Porewater methane concentrations and d13C-CH4 values in Alvin pushcore samples from Guaymas Basin hydrothermal sediments collected on R/V Atlantis cruise AT37-06 in December 2016

description: Porewater methane concentrations and d13C-CH4 values in Alvin pushcore samples from Guaymas Basin hydrothermal sediments collected on R/V Atlantis cruise AT37-06 in December 2016.
DOI: 10.26008/1912/bco-dmo.843000.1
title: Porewater sulfate, sulfide, ammonia, phosphate, and silicate concentrations in Alvin pushcore samples from Guaymas Basin hydrothermal sediments collected on R/V Atlantis cruise AT37-06 in December 2016

description: Porewater sulfate, sulfide, ammonia, phosphate, and silicate concentrations in Alvin pushcore samples from Guaymas Basin hydrothermal sediments collected on R/V Atlantis cruise AT37-06 in December 2016.
DOI: 10.26008/1912/bco-dmo.843222.1
title: CTD and underwater mass spectrometer data acquired in 2016  aboard the RV/Endeavor (cruise EN575) in the the subtropical Atlantic using a Triaxus tow vehicle.

description: CTD and underwater mass spectrometer data acquired in 2016  aboard the RV/Endeavor (cruise EN575) in the the subtropical Atlantic using a Triaxus tow vehicle.
DOI: 10.26008/1912/bco-dmo.844548.1
title: Core data collected in the Brazos River Plume, TX during 2017-2018

description: Core data collected in the Brazos River Plume, TX during three cruises conducted in 2017 and 2018. Cores were analyzed for grain size and mercury content.
DOI: 10.26008/1912/bco-dmo.844810.1
title: Carbon and nitrogen stable isotopes of marine inorganic and organic matter around O'ahu, Hawai'i, December 2017

description: A complete description of the collection and experimental methods is available in Price et al. (in review). In brief, sampling of inorganic and organic matter occurred between 6 and 16 December 2017 from six sites (Electric Beach, Hale‘iwa, Hawai‘i Institute of Marine Biology [HIMB], Magic Island, Sampan Channel, and Waimānalo) surrounding the island of O‘ahu, Hawai‘i, USA. Up to 8 L of seawater was collected in pre-acidified 2 L brown Nalgene bottles during the day (12:00 – 14:00) and night (18:00 – 20:00) and placed on ice in a cooler. Seawater samples were used to assess dissolved inorganic carbon, dissolved organic matter, and particulate organic matter and the specific methods used for each are described below. Zooplankton samples were also collected, but only during the nighttime sampling at four of the six sites (HIMB, Magic Island, Sampan, Waimānalo).
DOI: 10.26008/1912/bco-dmo.793690.2
title: Prochlorococcus, Synechococcus, and picoeukaryotic phytoplankton yearly mean global abundance for four CMIP5 climate scenarios using an ensemble of five circulation models

description: Prochlorococcus, Synechococcus and picoeukaryotic phytoplankton yearly mean global abundance for four CMIP5 climate scenarios using an ensemble of five circulation models from 1900 to 2100.
DOI: 10.26008/1912/bco-dmo.793776.2
title: Prochlorococcus, Synechococcus, and picoeukaryotic phytoplankton yearly standard deviation from mean global abundance estimated for four CMIP5 climate scenarios using an ensemble of five circulation models

description: Prochlorococcus, Synechococcus and picoeukaryotic phytoplankton yearly standard deviation from mean global abundance estimated for four CMIP5 climate scenarios using an ensemble of five circulation models from 1900 to 2100.
DOI: 10.26008/1912/bco-dmo.841242.1
title: Physiological parameters of eight corals species surveyed from six locations around O'ahu, HI from August to November of 2015

description: Physiological parameters of eight corals species surveyed from six locations around O'ahu, HI from August to November of 2015.
DOI: 10.26008/1912/bco-dmo.843323.1
title: The size (cm) of Porites astreoides in the first 18 quadrats of the transect at St. John, VI from 2000 to 2019

description: These data support Figures S3B in supplementary material and show the size (cm) of Porites astreoides in the first 18 quadrats of the transect at St. John, VI from 2000 to 2019.
DOI: 10.21335/nmdc-2142850561
title: Data from: Impact of baleen whales on ocean primary production across space and time

description: The dataset consists of an excel file with the following sheets:
Individuals: Summary records for 102 minke whales and five fin whales sampled in the Nordic and Barents Seas in 2019-2022.
Faeces: Dry matter content (%) and concentration of carbon and nutrients (mg/kg dry weight) in faeces of minke whales (N=102) and fin whales (n= 5) collected in Norway and Iceland in 2019-2022. Abbreviations: C = carbon, N = nitrogen, P = phosphorus, Ag = silver, As = arsenic, Cd = cadmium, Co = cobalt, Cr = chromium, Cu = copper, Fe = iron, Hg = mercury, Mn = manganese, Mo = molybdenum, Ni = nickel, Pb = lead, Se = selenium, V = vanadium, Zn = zinc. The full range of elements was measured in a subset of minke whale samples (n=31) and all fin whale samples - results shown in Fig. 1. The most abundant elements (C, N, P, Cu, Fe, Mn and Zn) were later analysed in all 102 minke whale samples - these data were used as input in all further analyses.
Urine: Nutrient concentration in minke whale urine (n=12), collected in Norway in 2021.
Abundance: Abundance estimates for six baleen whale species in the study area, per area (ICE=Iceland, GN=Greenland and Norwegian Sea, BS=Barents Sea) and survey block.
Daily nutrient release: Daily nutrient release rates by baleen whales via faeces and urine, by area (ICE=Iceland, GN=Greenland and Norwegian Sea, BS=Barents Sea) and survey block. Estimates are given per individual (g d-1) and for the entire population (g d-1).
DOI: 10.26008/1912/bco-dmo.843202.1
title: Density of Porites astreoides in quadrats at St. John, VI from 1992 to 2019

description: These data support Figure 2A in the paper and show density of Porites astreoides in quadrats that are 0.5 x 0.5 m in size, collected at St. John, VI from 1992 to 2019.
DOI: 10.26008/1912/bco-dmo.843259.1
title: Size of Porites astreoides colonies in annual photo-quadrats at St. John, VI from 1992 to 2019

description: These data support Figure 2B, C and show the size (in cm) of colonies of Porites astreo encountered in photoquadrat (each 0.5 x 0.5 m) recorded annually in the paper and show density of Porites astreoides in quadrats that are 0.5 x 0.5 m in size.
DOI: 10.26008/1912/bco-dmo.843284.1
title: Mean percentage cover of corals and Porites astreoides at each site by year at St. John, VI from 1992 to 2019

description: These data support Figure 3A and show the mean percentage cover of corals and Porites astreoides at each site by year
DOI: 10.26008/1912/bco-dmo.843296.1
title: Juveniles and recruits of Porites astreoides at each site by year at St. John, VI from 1994 to 2019

description: These data describe the density of juvenile colonies on natural substratum as well as the density of coral recruits on settlement tiles as a function of survey year (1994-2018) and site at St. John, VI from 1994 to 2019. Juvenile colonies refers to colonies of Porites spp. that were ≤ 4 cm diameter and were scored in 0.5 x 0.5 m quadrats by eye while on scuba. Recruits refer to individuals of Porites spp. that were found on 15 x 15 cm settlement tiles that were immersed for a year, recovered, bleached, dried, and scored for corals under a dissecting microscope.
DOI: 10.26008/1912/bco-dmo.843312.1
title: The density of Porites astreoides in the first 18 quadrats of the transect at St. John, VI from 2000 to 2019

description: These data support Figures S3A in supplementary material and show the density of Porites astreoides in the first 18 quadrats of the transect at St. John, VI from 2000 to 2019.
DOI: 10.26008/1912/bco-dmo.636636.1
title: Time series of dissolved oxygen measured on an undulating glider collected from the South Atlantic Bight (SAB) cruises along the continental shelf off Long Bay from January to April in 2012 (Long Bay Wintertime Bloom project)

description: Two Webb Slocum gliders were used to measure salinity, temperature, and depth.  Glider 'Pelagia' was deployed in Long Bay, S. Carolina, South Atlantic Bight and glider 'Ramses' was deployed along the upper slope of S. Carolina. in 2012.  Data were collected in a time series from January to April, 2012.

NOTE: This is a very large dataset (1.53 million records). It takes a while to serve and may not display entirely depending on your browser. You can download all the data from the Data Files section on this metadata page.
DOI: 10.26008/1912/bco-dmo.839385.1
title: Hurricane Harvey impacts on biogeochemistry of water assessed using samples collected in Mission-Aransas Estuary in south Texas from June 2017 to March 2019

description: The impact of Hurricane Harvey on the chemical composition of water was assessed using samples collected from June 2017 to March 2019 at Mission-Aransas Estuary in south Texas. Hydrographic measurements including temperature, salinity, dissolved oxygen, and pH were collected on site using a YSI sonde. Water samples were obtained from both surface and bottom depths at 19 sites, and later analyzed for dissolved nutrients, organic carbon and nitrogen, and pigments.
DOI: 10.26008/1912/bco-dmo.839436.1
title: Hurricane Harvey impacts on biogeochemistry of sediments assessed using samples collected in Mission-Aransas Estuary in south Texas from June 2017 to March 2019

description: The impact of Hurricane Harvey on sediment biogeochemistry was assessed using sediment samples collected from June 2017 to March 2019 in Mission-Aransas Estuary in south Texas. Sediment core samples were sectioned and analyzed for mineral grain size, organic carbon and nitrogen, stable isotopic composition, pigments, plus sediment alkane and polycyclic aromatic hydrocarbons.
DOI: 10.26008/1912/bco-dmo.685079.1
title: Tow log and catch for study of windowpane flounder catch using scup gear and a Large Mesh Belly Panel (LMBP), October 2015 (Windowpane Bycatch project)

description: This dataset reports the cruise metadata, gear deployment information as well as the weights for the species caught in each haul. Data was collected from paired tows to determine if a large mesh belly panel effectively reduces the catch of windowpane flounder in the small mesh scup fishery with existing gear and fishing practices. The data was analyzed to determine the statistical level of difference between the control and experimental nets for the targeted scup catch and for the windowpane flounder catch, should a difference exist.
DOI: 10.26008/1912/bco-dmo.686539.1
title: Scup and windowpane flounder length frequency count for study of windowpane flounder catch using scup gear and a Large Mesh Belly Panel (LMBP), October 2015 (Windowpane Bycatch project)

description: This dataset reports the length frequency count of scup and windowpane flounder caught in each haul. Data was collected from paired tows to determine if a large mesh belly panel effectively reduces the catch of windowpane flounder in the small mesh scup fishery with existing gear and fishing practices. The data was analyzed to determine the statistical level of difference between the control and experimental nets for the targeted scup catch and for the windowpane flounder catch, should a difference exist.