cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34740/kaggle/dsv/5072361
title: 12.4k Cryptocurrency Data
DOI: 10.34808/67w9-j565
title: Bricks images dataset

description: The set contains 200 images of various wooden bricks of various shapes and colors placed on a background (blanket) with some heart shaped patterns. Each photo is available in 300x300 and 224x224 pixels size in PNG format. Photos are divided in 10 classes – 8 types of bricks photographed form various angles + 2 additional classes (multiple bricks at one photo; empty background).
The set may be usefull for image recognition algorithms training and testing.  Figure 1. All bricks presented in images. Photos are divided in to the following categories:




Category


Bricks no. at fig. 1


Brick size




Ball


1


48 mm (diamater)




Cylinder


2, 3, 4


99x19x19 mm




RectangleN (narrow)


5, 6


100x34x19 mm




RectangleW (wide)


7, 8


100x49x19 mm




Ring


9, 10


19 mm (width)49 mm (external diameter)21 mm (internal hole diameter)




Square


11, 12, 13, 14, 15, 16


50x50x19 mm




Triangle1


17, 18


96x47x19




Triangle2 (Isosceles)


19, 20, 21, 22, 23, 24


47x47x19 (yellow, green)66x66x19 (red)




Multiple


 


 




Empty


25, background, no brick
DOI: 10.34808/k2h5-td77
title: Study of proapoptotic activity of anthraquinone derivatives towards A549 cancer cells using flow cytometry

description: 


This study presents the fluorescence intensity of Annexin V/7AAD and caspase 3/7 which correspond to the proapoptotic activity of anthraquinone derivatives towards A549 cancer cells.
DOI: 10.34740/kaggle/dsv/5176671
title: Anthony Fauci Emails - The Face of US on COVID
DOI: 10.5281/zenodo.7334623
title: International corporations trading Brazilian soy are keystone actors for water stewardship

description: Transnational corporations play a major, but poorly constrained, role in reallocating global water resources. Here, we couple high-resolution, company-specific trade data with hydrological and crop models to estimate the virtual water trade of the top 10 transnational corporations that trade Brazilian soy. We identify 4429 virtual water flows connecting 1620 Brazilian municipalities with the top-10 soy importing countries and find that the total virtual water flow increased from 43 billion m<sup>3</sup> to 100 billion m<sup>3</sup> between 2004 and 2018. We find that the largest soy traders displace on average twice as much virtual water as top-importing countries, excluding China. For example, in 2018 Bunge Limited exported 15 Gm<sup>3</sup>, almost tripling the Netherlands's virtual water import (the second largest importer at about 5 Gm<sup>3</sup>). Our findings highlight the importance of transnational corporations for achieving water stewardship and sustainable supply chains to support water resource security at municipal and international scales.
DOI: 10.5281/zenodo.6645707
title: International corporations trading Brazilian soy are keystone actors for water stewardship

description: Transnational corporations play a major, but poorly constrained, role in reallocating global water resources. Here, we couple high-resolution, company-specific trade data with hydrological and crop models to estimate the virtual water trade of the top 10 transnational corporations that trade Brazilian soy. We identify 4429 virtual water flows connecting 1620 Brazilian municipalities with the top-10 soy importing countries and find that the total virtual water flow increased from 43 billion m<sup>3</sup> to 100 billion m<sup>3</sup> between 2004 and 2018. We find that the largest soy traders displace on average twice as much virtual water as top-importing countries, excluding China. For example, in 2018 Bunge Limited exported 15 Gm<sup>3</sup>, almost tripling the Netherlands's virtual water import (the second largest importer at about 5 Gm<sup>3</sup>). Our findings highlight the importance of transnational corporations for achieving water stewardship and sustainable supply chains to support water resource security at municipal and international scales.
DOI: 10.23729/206af669-07fd-4a30-9968-b4ded5003014
title: Data for "Numerical evidence for a small-scale dynamo approaching solar magnetic Prandtl numbers"

description: This data set contains the simulation data for the Nature Astronomy publication "Numerical evidence for a small-scale dynamo approaching solar magnetic Prandtl numbers". Magnetic fields on small scales are ubiquitous in the universe. Though they can often be observed in detail, their generation mechanisms are not fully understood. One possibility is the so-called small-scale dynamo (SSD). Prevailing numerical evidence, however, appears to indicate that an SSD is unlikely to exist at very low magnetic Prandtl numbers (Pm) such as are present in the Sun and other cool stars. We have performed high-resolution simulations of isothermal forced turbulence employing the lowest Pm values so far achieved. Contrary to earlier findings, the SSD turns out to be not only possible for Pm down to 0.0031, but even becomes increasingly easier to excite for Pm below 0.05. We relate this behaviour to the known hydrodynamic phenomenon referred to as the bottleneck effect. Extrapolating our results to solar values of Pm indicates that an SSD would be possible under such conditions.
DOI: 10.5281/zenodo.7713976
title: Supplemental Files for "A highly contiguous genome assembly reveals sources of genomic novelty in the symbiotic fungus Rhizophagus irregularis"

description: Supplemental files for "A highly contiguous genome assembly reveals sources of genomic novelty in the symbiotic fungus Rhizophagus irregularis". This data is linked to the bioRxiv pre-print doi: https://doi.org/10.1101/2022.10.19.511543, an updated version of which is in press at G3: Genes|Genomes|Genetics, and corresponds to the NCBI BioProject PRJNA885267 and NCBI BioSample SAMN31081226. <strong>Nuclear genome assembly</strong> Rhizophagus_irregularis_DAOM197198_assembly.fasta <strong>Illumina and Illumina+Nanopore gene annotations</strong> Rhizophagus_irregularis_DAOM197198_Illumina+ONT_curated.gff3 Rhizophagus_irregularis_DAOM197198_Illumina_curated.gff3 <strong>Illumina and Illumina+Nanopore functional gene annotations</strong> Rhizophagus_irregularis_DAOM197198_annotations_Illumina+ONT.txt Rhizophagus_irregularis_DAOM197198_annotations_Illumina.txt <strong>Illumina and Illumina+Nanopore CDS sequences</strong> Rhizophagus_irregularis_DAOM197198_cds-transcripts_Illumina+ONT_curated.fa Rhizophagus_irregularis_DAOM197198_cds-transcripts_Illumina_curated.fa <strong>Illumina and Illumina+Nanopore mRNA sequences</strong> Rhizophagus_irregularis_DAOM197198_mrna-transcripts_Illumina+ONT_curated.fa Rhizophagus_irregularis_DAOM197198_mrna-transcripts_Illumina_curated.fa <strong>Illumina and Illumina+Nanopore protein sequences</strong> Rhizophagus_irregularis_DAOM197198_proteins_Illumina+ONT_curated.fa Rhizophagus_irregularis_DAOM197198_proteins_Illumina_curated.fa <strong>GO terms for g:Profiler</strong><br> Rhizophagus_irregularis_DAOM197198_Illumina+ONT_GOterms.gmt<br> *Or use token gp__xfGY_dQeI_yx4 <strong>Repetitive and transposable element library and annotation</strong> Rhizophagus_irregularis_DAOM197198_curatedrepeatlibrary.fasta Rhizophagus_irregularis_DAOM197198_repeatmasker.out Rhizophagus_irregularis_DAOM197198_repeats.gff3 <strong>DNA methylome (sequenced from spores)</strong> Rhizophagus_irregularis_DAOM197198_mCG_mods_frequency.tsv <strong>Poly(A) signal and tail sequences</strong> Rhizophagus_irregularis_DAOM197198_pasa_polyAsite_analysis.out Rhizophagus_irregularis_DAOM197198_pasa_polyAsites.fasta <strong>Small RNA annotation</strong> Rhizophagus_irregularis_DAOM197198_sRNA.gff3 Rhizophagus_irregularis_DAOM197198_sRNA.tsv <strong>Mitochondrial genome assembly and annotation</strong> Rhizophagus_irregularis_DAOM197198_mtDNA.fasta Rhizophagus_irregularis_DAOM197198_mtDNA.gff <strong><em>R. irregularis</em> phylostratigraphy</strong> Rhizophagus_irregularis_DAOM197198_1432141_phyloranks.tsv Rhizophagus_irregularis_DAOM197198_1432141_high-confidence_phyloranks.tsv <strong>Mucoromycota fungi phylostratigraphy</strong> Disdec1_101101_phyloranks.tsv Geopyr1_50956_phyloranks.tsv Gigmar1_4874_phyloranks.tsv Morel2_1314771_phyloranks.tsv Phybl2_4837_phyloranks.tsv Radspe1_64574_phyloranks.tsv <strong>Fatty acid synthase phylogeny</strong> FAS_genes_muscle5_msa.fa (alignments) FAS_genes.raxml.support (ML tree)
DOI: 10.5281/zenodo.7713975
title: Supplemental Files for "A highly contiguous genome assembly reveals sources of genomic novelty in the symbiotic fungus Rhizophagus irregularis"

description: Supplemental files for "A highly contiguous genome assembly reveals sources of genomic novelty in the symbiotic fungus Rhizophagus irregularis". This data is linked to the bioRxiv pre-print doi: https://doi.org/10.1101/2022.10.19.511543, an updated version of which is in press at G3: Genes|Genomes|Genetics, and corresponds to the NCBI BioProject PRJNA885267 and NCBI BioSample SAMN31081226. <strong>Nuclear genome assembly</strong> Rhizophagus_irregularis_DAOM197198_assembly.fasta <strong>Illumina and Illumina+Nanopore gene annotations</strong> Rhizophagus_irregularis_DAOM197198_Illumina+ONT_curated.gff3 Rhizophagus_irregularis_DAOM197198_Illumina_curated.gff3 <strong>Illumina and Illumina+Nanopore functional gene annotations</strong> Rhizophagus_irregularis_DAOM197198_annotations_Illumina+ONT.txt Rhizophagus_irregularis_DAOM197198_annotations_Illumina.txt <strong>Illumina and Illumina+Nanopore CDS sequences</strong> Rhizophagus_irregularis_DAOM197198_cds-transcripts_Illumina+ONT_curated.fa Rhizophagus_irregularis_DAOM197198_cds-transcripts_Illumina_curated.fa <strong>Illumina and Illumina+Nanopore mRNA sequences</strong> Rhizophagus_irregularis_DAOM197198_mrna-transcripts_Illumina+ONT_curated.fa Rhizophagus_irregularis_DAOM197198_mrna-transcripts_Illumina_curated.fa <strong>Illumina and Illumina+Nanopore protein sequences</strong> Rhizophagus_irregularis_DAOM197198_proteins_Illumina+ONT_curated.fa Rhizophagus_irregularis_DAOM197198_proteins_Illumina_curated.fa <strong>GO terms for g:Profiler</strong><br> Rhizophagus_irregularis_DAOM197198_Illumina+ONT_GOterms.gmt<br> *Or use token gp__xfGY_dQeI_yx4 <strong>Repetitive and transposable element library and annotation</strong> Rhizophagus_irregularis_DAOM197198_curatedrepeatlibrary.fasta Rhizophagus_irregularis_DAOM197198_repeatmasker.out Rhizophagus_irregularis_DAOM197198_repeats.gff3 <strong>DNA methylome (sequenced from spores)</strong> Rhizophagus_irregularis_DAOM197198_mCG_mods_frequency.tsv <strong>Poly(A) signal and tail sequences</strong> Rhizophagus_irregularis_DAOM197198_pasa_polyAsite_analysis.out Rhizophagus_irregularis_DAOM197198_pasa_polyAsites.fasta <strong>Small RNA annotation</strong> Rhizophagus_irregularis_DAOM197198_sRNA.gff3 Rhizophagus_irregularis_DAOM197198_sRNA.tsv <strong>Mitochondrial genome assembly and annotation</strong> Rhizophagus_irregularis_DAOM197198_mtDNA.fasta Rhizophagus_irregularis_DAOM197198_mtDNA.gff <strong><em>R. irregularis</em> phylostratigraphy</strong> Rhizophagus_irregularis_DAOM197198_1432141_phyloranks.tsv Rhizophagus_irregularis_DAOM197198_1432141_high-confidence_phyloranks.tsv <strong>Mucoromycota fungi phylostratigraphy</strong> Disdec1_101101_phyloranks.tsv Geopyr1_50956_phyloranks.tsv Gigmar1_4874_phyloranks.tsv Morel2_1314771_phyloranks.tsv Phybl2_4837_phyloranks.tsv Radspe1_64574_phyloranks.tsv <strong>Fatty acid synthase phylogeny</strong> FAS_genes_muscle5_msa.fa (alignments) FAS_genes.raxml.support (ML tree)
DOI: 10.5281/zenodo.7740222
title: Norwegian Aquaculture Ecotox Database

description: This dataset compiles ecotoxicity data (from 1978 to 2020) of the veterinary medicine products (VMP) emamectin benzoate, imidacloprid, diflubenzuron and teflubenzuron, to a variety of aquatic organisms.
DOI: 10.5281/zenodo.7740223
title: Norwegian Aquaculture Ecotox Database

description: This dataset compiles ecotoxicity data (from 1978 to 2020) of the veterinary medicine products (VMP) emamectin benzoate, imidacloprid, diflubenzuron and teflubenzuron, to a variety of aquatic organisms.
DOI: 10.5281/zenodo.7740188
title: How to suppress radiative losses in high-contrast integrated Bragg gratings

description: Dataset related to the publication "How to suppress radiative losses in high-contrast integrated Bragg gratings" by Manfred Hammer, Henna Farheen, Jens Förstner, Journal of the Optical Society of America B (2023), https://doi.org/10.1364/JOSAB.485725<br> <br> The .zip archive provides full data for reproducing the figures in the paper. Matlab .m-scripts and xfig .fig-files for generating the plots are included; reproducing the simulations requires compiling the .cpp driver files together with the subroutines of the Metric collection (see https://metric.computational-photonics.eu/). See the file "Readme" for guidance through the folder structure.<br> <br>
description: Financial support from the German Research Foundation (Deutsche Forschungsgemeinschaft DFG, project 231447078–TRR 142, subproject B06) is gratefully acknowledged.
DOI: 10.5281/zenodo.7740189
title: How to suppress radiative losses in high-contrast integrated Bragg gratings

description: Dataset related to the publication "How to suppress radiative losses in high-contrast integrated Bragg gratings" by Manfred Hammer, Henna Farheen, Jens Förstner, Journal of the Optical Society of America B (2023), https://doi.org/10.1364/JOSAB.485725<br> <br> The .zip archive provides full data for reproducing the figures in the paper. Matlab .m-scripts and xfig .fig-files for generating the plots are included; reproducing the simulations requires compiling the .cpp driver files together with the subroutines of the Metric collection (see https://metric.computational-photonics.eu/). See the file "Readme" for guidance through the folder structure.<br> <br>
description: Financial support from the German Research Foundation (Deutsche Forschungsgemeinschaft DFG, project 231447078–TRR 142, subproject B06) is gratefully acknowledged.
DOI: 10.5281/zenodo.7682122
title: spindle cell variant diffuse large B-cell lymphoma (NGS annotation file; high confidence calls) hematolrep-2136295

description: Diffuse large B-cell lymphoma with spindle cell morphology is a rare variant. We present the case of a 74-year-old male who initially presented with a right supraclavicular (lymph) node enlargement. Histological analysis showed a proliferation of spindle-shaped cells with narrow cytoplasms. An immunohistochemical panel was used to exclude other tumors, such as melanoma, carcinoma, and sarcoma. The lymphoma was characterized by a cell-of-origin subtype of germinal center B-cell-like (GCB) based on Hans’ classifier (CD10-negative, BCL6-positive, and MUM1-negative); EBER negativity, and the absence of BCL2, BCL6, and MYC rearrangements. Mutational profiling using a custom panel of 168 genes associated with aggressive B-cell lymphomas confirmed mutations in ACTB, ARID1B, DUSP2, DTX1, HLA-B, PTEN, and TNFRSF14. Based on the LymphGen 1.0 classification tool, this case had an ST2 subtype prediction. The immune microenvironment was characterized by moderate infiltration of M2-like tumor-associated macrophages (TMAs) with positivity of CD163, CSF1R, CD85A (LILRB3), and PD-L1; moderate PD-1 positive T cells, and low FOXP3 regulatory T lymphocytes (Tregs). Immunohistochemical expression of PTX3 and TNFRSF14 was absent. Interestingly, the lymphoma cells were positive for HLA-DP-DR, IL-10, and RGS1, which are markers associated with poor prognosis in DLBCL. The patient was treated with R-CHOP therapy, and achieved a metabolically complete response. Carreras J, Kikuti YY, Miyaoka M, Hiraiwa S, Tomita S, Ikoma H, Kondo Y, Ito A, Nagase S, Miura H, Roncador G, Colomo L, Hamoudi R, Campo E, Nakamura N. Mutational Profile and Pathological Features of a Case of Interleukin-10 and RGS1-Positive Spindle Cell Variant Diffuse Large B-Cell Lymphoma. <em>Hematology Reports</em>. 2023; 15(1):188-200. https://doi.org/10.3390/hematolrep15010020
DOI: 10.5281/zenodo.7682121
title: spindle cell variant diffuse large B-cell lymphoma (NGS annotation file; high confidence calls) hematolrep-2136295

description: Diffuse large B-cell lymphoma with spindle cell morphology is a rare variant. We present the case of a 74-year-old male who initially presented with a right supraclavicular (lymph) node enlargement. Histological analysis showed a proliferation of spindle-shaped cells with narrow cytoplasms. An immunohistochemical panel was used to exclude other tumors, such as melanoma, carcinoma, and sarcoma. The lymphoma was characterized by a cell-of-origin subtype of germinal center B-cell-like (GCB) based on Hans’ classifier (CD10-negative, BCL6-positive, and MUM1-negative); EBER negativity, and the absence of BCL2, BCL6, and MYC rearrangements. Mutational profiling using a custom panel of 168 genes associated with aggressive B-cell lymphomas confirmed mutations in ACTB, ARID1B, DUSP2, DTX1, HLA-B, PTEN, and TNFRSF14. Based on the LymphGen 1.0 classification tool, this case had an ST2 subtype prediction. The immune microenvironment was characterized by moderate infiltration of M2-like tumor-associated macrophages (TMAs) with positivity of CD163, CSF1R, CD85A (LILRB3), and PD-L1; moderate PD-1 positive T cells, and low FOXP3 regulatory T lymphocytes (Tregs). Immunohistochemical expression of PTX3 and TNFRSF14 was absent. Interestingly, the lymphoma cells were positive for HLA-DP-DR, IL-10, and RGS1, which are markers associated with poor prognosis in DLBCL. The patient was treated with R-CHOP therapy, and achieved a metabolically complete response. Carreras J, Kikuti YY, Miyaoka M, Hiraiwa S, Tomita S, Ikoma H, Kondo Y, Ito A, Nagase S, Miura H, Roncador G, Colomo L, Hamoudi R, Campo E, Nakamura N. Mutational Profile and Pathological Features of a Case of Interleukin-10 and RGS1-Positive Spindle Cell Variant Diffuse Large B-Cell Lymphoma. <em>Hematology Reports</em>. 2023; 15(1):188-200. https://doi.org/10.3390/hematolrep15010020
DOI: 10.17029/417d5098-bf2c-4939-a71a-f38952b0fd1a
title: Test160323

description: Test
DOI: 10.17909/8sx8-s282
title: IUE spectra of alpha^2 CVn
DOI: 10.5281/zenodo.7740349
title: BGCFlow Report Demo

description: A demo of BGCFlow output report containing a small dataset of <em>Lactobacillus delbrueckii</em> genomes.
DOI: 10.5281/zenodo.7740348
title: BGCFlow Report Demo

description: A demo of BGCFlow output report containing a small dataset of <em>Lactobacillus delbrueckii</em> genomes.
DOI: 10.5281/zenodo.7148424
title: Automatic ESG Assessment of Companies by Mining and Evaluating Media Coverage Data: NLP Approach and Tool

description: <strong>Replication package for our paper submission to ECIR 2023</strong> It contains the following files: Our data set of 487,621 news headlines annotated as being environmental-, governance-, or social-related. We encourage fellow researchers to use the corpus as a benchmark for other ESG-relevant NLP tasks. Code/Notebooks that we used for the training and evaluation of our company detection, ESG classification, and sentiment models Full tables detailing the results of all experiments performed
DOI: 10.5281/zenodo.7153534
title: Automatic ESG Assessment of Companies by Mining and Evaluating Media Coverage Data: NLP Approach and Tool

description: <strong>Replication package for our paper submission to ECIR 2023</strong> It contains the following files: Our data set of 487,621 news headlines annotated as being environmental-, governance-, or social-related. We encourage fellow researchers to use the corpus as a benchmark for other ESG-relevant NLP tasks. Code/Notebooks that we used for the training and evaluation of our company detection, ESG classification, and sentiment models Full tables detailing the results of all experiments performed
DOI: 10.5281/zenodo.7148423
title: Automatic ESG Assessment of Companies by Mining and Evaluating Media Coverage Data: NLP Approach and Tool

description: <strong>Replication package for our paper </strong>Automatic ESG Assessment of Companies by Mining and Evaluating Media Coverage Data: NLP Approach and Tool It contains the following files: Our data set of 432,411 news headlines annotated as being environmental-, governance-, or social-related. We encourage fellow researchers to use the corpus as a benchmark for other ESG-relevant NLP tasks. Code/Notebooks that we used for the training and evaluation of our company detection, ESG classification, and sentiment models Full tables detailing the results of all experiments performed
DOI: 10.5281/zenodo.7156130
title: Automatic ESG Assessment of Companies by Mining and Evaluating Media Coverage Data: NLP Approach and Tool

description: <strong>Replication package for our paper </strong>Automatic ESG Assessment of Companies by Mining and Evaluating Media Coverage Data: NLP Approach and Tool It contains the following files: Our data set of 432,411 news headlines annotated as being environmental-, governance-, or social-related. We encourage fellow researchers to use the corpus as a benchmark for other ESG-relevant NLP tasks. Code/Notebooks that we used for the training and evaluation of our company detection, ESG classification, and sentiment models Full tables detailing the results of all experiments performed
DOI: 10.6084/m9.figshare.22284355
title: Det_loc_for each of 5 changes for words.xlsx

description: Detection and location for each of 5 types of change for words
DOI: 10.6084/m9.figshare.22284355.v1
title: Det_loc_for each of 5 changes for words.xlsx

description: Detection and location for each of 5 types of change for words
DOI: 10.34740/kaggle/dsv/5176844
title: YouTube Daily