cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26036/cnp0003531
title: Discovery of the anti-cancer effect and mechanism of pangolin scale extract on malignant melanoma cell line

description: This project is exploring the effect and underlying mechanism of pangolin scale extract against melanoma based on wet-lab and transcriptomic techniques.
DOI: 10.26036/cnp0003464
title: The genome of Magnolia hypoleuca provides a new insight into the evolutionary position of magnoliids

description: We report a chromosome-scale assembly of M.hypoleuca genome by combining Oxford Nanopore sequencing and Hi-C technologies. The 1.7 Gb assembly covers 96.64% of the genome, with contig N50 of 1.71 Mb and containing 36,651 annotated protein-coding genes.
DOI: 10.26036/cnp0001453
title: RAN seq of Boehmeria nivea (L.)

description: Bast fiber tissue transcriptomics of two Cultivars in 5 developmental stage
DOI: 10.26036/cnp0003701
title: Assessing the impact of sequencing platforms and analytical pipelines on 2 whole-exome sequencing

description: In this study, we used three sequencers platforms and seven pipelines to evaluate the impact of sequencing platforms and analysis pipelines on WES results. Based on HD832 standard samples, we constructed two biological replicates and three technical replicates on NovaSeq 6000 and GenoLab M platforms; we finally obtained nine data_sets and analyzed them via seven analysis pipelines, respectively.
DOI: 10.26036/cnp0000681
title: The genome of Pyrus bretschneideri ‘Hongxiangsu’

description: The genome of Pyrus bretschneideri ‘Hongxiangsu’, a pear cultivar bred by Zhengzhou Fruit Research Institute, Chinese Academy of Agriculture Sciences from a cross ‘Korla pear’×‘Eli’
DOI: 10.26036/cnp0000718
title: The genome assembly of common apricot, Prunus armeniaca L.

description: The common apricot (Prunus armeniaca L.) is a kind of stone fruit tree which was widely cultivated in the world. Apricot also plays an important ecological and economic role in the economic development and ecological protection of the poor areas in the north of China. To facilitate and expand the use of P. armeniaca for breeding and its genetic improvement, we firstly assembled a whole-genome sequence of P.armeniaca.
DOI: 10.6084/m9.figshare.21667631.v1
title: inorganic ion

description: inorganic ion concentrations at Aydat lake and rainwater
DOI: 10.25934/pr00008613
title: Epidemiology and antimicrobial resistance of bacteria causing eye infections.

description: Antimicrobial resistance (AMR) is a costly and serious threat to public health. AMR now ranks as a leading cause of mortality around the world, with 1.27 million deaths/year directly attributable to antibiotic-resistant bacterial infections. AMR is also a concerning issue in ophthalmology as ocular bacteria are becoming increasingly more resistant to first-line antimicrobial therapies leading to treatment failures that result in poor outcomes and serious morbid consequences such as blindness. 
The aim of this project is to characterize the genomic epidemiology and resistome of major ocular bacterial pathogens to understand the diversity of microbial species causing ocular bacterial infections and their distribution across different ocular sites.
DOI: 10.6084/m9.figshare.21673910
title: Supplementary Material for: Constipation in Parkinson’s Disease: A Systematic Review and Meta-Analysis

description: <b><i>Introduction:</i></b> Constipation is a common nonmotor symptom of Parkinson’s disease (PD) and has been reported to increase the risk of developing PD. However, previous studies have yielded conflicting results. Understanding this correlation may promote early diagnosis and treatment of PD, which could help patients improve their quality of life. This study aimed to investigate the association between constipation and PD onset. <b><i>Methods:</i></b> The study was conducted in accordance with the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) and Meta-analyses of Observational Studies in Epidemiology (MOOSE) guidelines. We searched the Medline, Embase, Scopus, SINOMED, and Cochrane databases as well as specific journals from inception to September 2021 for observational studies that evaluated the association between constipation and the risk of PD. The Newcastle-Ottawa Scale was used to evaluate the methodological quality of the included studies. Associations were summarized as odds ratios (ORs) using a random-effects model. Subgroup, meta-regression, and sensitivity analyses were performed. <b><i>Results:</i></b> Seventeen studies comprising 3,024,193 participants (case-control = 1,636,831; cohort = 1,387,362) were eligible for inclusion. The pooled OR for the association between constipation and PD was 2.36 (95% confidence interval: 1.93–2.88), although strong heterogeneity was observed (<i>I</i><sup>2</sup> = 90%, <i>p</i> &lt; 0.01). Subgroup and meta-regression analyses indicated that study design and disease duration were the major sources of heterogeneity. A sensitivity analysis confirmed the stability of the outcomes. In addition, the prevalence of among those with prodromal PD was 20%, whereas it was only 11% in the control group (<i>p</i> &lt; 0.01). Moreover, there were no significant age-based differences in constipation between the prodromal stage of PD patients and the controls (<i>p</i> &gt; 0.05). <b><i>Conclusion:</i></b> Constipation has a relatively high incidence in the prodromal phase of PD and is associated with an increased risk of developing PD.
DOI: 10.5255/ukda-sn-854104
title: London weekly bills of mortality, 1644-1849
DOI: 10.6084/m9.figshare.21673184
title: Supplementary Material for: The Duration of Neonatal Phototherapy and Allergic Disorders: The Japan Environment and Children’s Study

description: <b><i>Introduction:</i></b> Currently, the association between the duration of neonatal phototherapy and the risk of allergic disorders has not been reported. This observational cohort study aimed to examine the association between allergic disorders, including food allergies, that are present before 3 years of age and the duration of phototherapy using the nationwide birth cohort data. <b><i>Methods:</i></b> The Japan Environment and Children’s Study was a nationwide birth cohort study. Data of 77,064 infants aged 1 year, 1.5 years, 2 years, and 3 years were analyzed. We divided the participants into three groups: no phototherapy, short phototherapy (1–24 h), and long phototherapy (&gt;24 h) and evaluated the cumulative incidence of allergic disorders before 3 years of age, including asthma, atopic dermatitis, and food allergies. Logistic regression analysis was performed to assess the impact of phototherapy duration on the cumulative incidence of allergic disorders. <b><i>Results:</i></b> After adjustment for potential risk factors, long phototherapy was found to be positively associated with food allergies at age 2 years (OR: 1.16; 95% CI: 1.01–1.33) and all allergic disorders at age 3 years (OR: 1.12; 95% CI: 1.01–1.24), including food allergies (OR 1.18; 95% CI: 1.04–1.35). <b><i>Conclusion:</i></b> A long duration of neonatal phototherapy was positively associated with the risk of allergic disorders, especially food allergies.
DOI: 10.5281/zenodo.5167361
title: Data and Code for "Study of Solar Wind and Interplanetary Magnetic Field Features Associated with Geomagnetic Storms: The Cross Wavelet Approach"

description: These files are the supplementary information, including dataset, codes and plots for the research work entitled "Study of Solar Wind and Interplanetary Magnetic Field Features Associated with Geomagnetic Storms: The Cross Wavelet Approach".
DOI: 10.6073/pasta/20b8bf4b57cabf7c8fbd7bd99f09b43e
title: AGW03 Konza Prairie Long-term high frequency groundwater level and temperature from wells on N04d

description: The objectives of this project are to quantify the seasonably variable timing among meteoric precipitation, groundwater recharge, and groundwater temperature. Hypotheses are: 1. Because of the karst-like characteristics of the aquifers in N04d (and by extension, the entire region), recharge will be rapid during moderately large precipitation events where fractures are enlarged by dissolution and therefore highly conductive, except during the most active part of the growing season. 2. The recharge efficiency of the aquifers will be spatially variable, with highest hydraulic conductivity (because of solution enlargement of fractures) near the riparian zone. 3. Groundwater temperature will vary continuously over the year and also demonstrate abrupt changes after recharge-effective precipitation events when the precipitation temperature is different from the groundwater temperature. Because the aquifers are merokarst and recharge is rapid, data are recorded at high frequency (5 minute intervals).
DOI: 10.6073/pasta/f786154967693a6e86c9b63fd9e30091
title: Photodegradation and biodegradation of dissolved organic carbon from four lakes of varying trophic status in Pennsylvania and Florida in 2016

description: The enclosed data are results from a series of monthly (May-August) experiments conducted in 2016. We measured changes in five variables (dissolved organic carbon (DOC), dissolved inorganic carbon, dissolved oxygen, the spectral slope ratio, and the DOC specific ultraviolet absorbance at 320 nm). Groundwater samples adjacent to four lakes of varying trophic status were used to assess changes in the above variables due to photodegradation and biodegradation. Three lakes (Lacawac, Giles, and Waynewood) are located in the Pocono region of Pennsylvania. The fourth lake (Annie) is located in Venus, FL. Details of the experiment can be found in Dempsey et al. 2020 (accepted at Biogeosciences). In this study, we used groundwater (terrestrial DOC) to simulate storm water inputs to the surface of a lake. We assessed the relative importance of photodegradation and biodegradation by measuring changes in the above variables. All experiments were conducted on the surface of Lake Lacawac (PA). Here, we provide our raw data from the experiments. Outgassing of carbon dioxide (CO2) from freshwater ecosystems comprises 12-25% of the total carbon flux from soils and bedrock. This CO2 is largely derived from both biodegradation and photodegradation of terrestrial dissolved organic carbon (DOC) entering lakes from wetlands and soils in the watersheds of lakes. In spite of the significance of these two processes in regulating rates of CO2 outgassing, their relative importance remains poorly understood in lake ecosystems. In this study, we used groundwater from the watersheds of one subtropical and three temperate lakes of differing trophic status to simulate the effects of increases in terrestrial DOC from storm events. We assessed the relative importance of biodegradation and photodegradation in oxidizing DOC to CO2. We measured changes in DOC concentration, colored dissolved organic carbon (SUVA320 and Sr), dissolved oxygen, and dissolved inorganic carbon (DIC) in short-term experiments from May-August, 2016. In all lakes, photodegradation led to larger changes in DOC and DIC concentrations and optical characteristics than biodegradation. A descriptive discriminant analysis showed that in brown-water lakes, photodegradation led to the largest declines in DOC concentration. In these brown-water systems, ~30% of the DOC was processed by sunlight and a minimum of 1% was photo mineralized. In addition to documenting the importance of photodegradation in lakes, these results also highlight how lakes in the future may respond to changes in DOC inputs.
DOI: 10.6084/m9.figshare.20949031.v1
title: drépano témoin.xlsx

description: sickle cell anemia child echocardiography <br>
DOI: 10.6084/m9.figshare.21673169
title: Supplementary Material for: Glucagon-Like Peptide-2 Ameliorates Age-Associated Bone Loss and Gut Barrier Dysfunction in Senescence-Accelerated Mouse Prone 6 Mice

description: <b><i>Introduction:</i></b> Senile osteoporosis is one of the most common age-related diseases worldwide. Glucagon like peptide-2 (GLP-2), a naturally occurring gastrointestinal peptide, possesses therapeutic effects on bone loss in postmenopausal women and ovariectomized rats. However, the role of GLP-2 in senile osteoporosis and underlying mechanisms has not been explored. <b><i>Methods:</i></b> GLP-2 was subcutaneously injected into the 6-month-old male senile osteoporosis model of senescence-accelerated mouse prone 6 (SAMP6) mice for 6 weeks. SAMP6 subjected to normal saline and senescence-accelerated mouse resistant 1 served as control groups. Micro-computed tomography was performed to evaluate the bone mass and microarchitecture of the mice. Osteoblastic and osteoclastic activities were determined by biochemical, quantitative real-time PCR, histological, and histomorphometric analyses combined with hematoxylin-eosin, toluidine blue, and tartrate-resistant acid phosphatase staining. We also examined the proteins and structure of intestinal tight junction using immunohistochemical assay as well as a transmission electron microscope. Serum inflammation marker levels were measured using ELISA. Additionally, anti-oxidative enzymes GPX-4 and SOD-2 and receptors of GLP-2 and vitamin D expression in the ileum and colon were detected under immunofluorescence staining. <b><i>Results:</i></b> Six-week GLP-2 treatment attenuated bone loss in SAMP6 mice, as evidenced by increased bone mineral density, improved microarchitecture in femora, and enhanced osteogenic activities. In contrast, the activity of osteoclastic activity was not obviously inhibited. Moreover, GLP-2 ameliorated tight junction structure and protein expression in the intestinal barrier, which was accompanied by the reduction of TNF-α level. The expression of receptors of intestinal GLP-2 and vitamin D in the ileum was elevated. Furthermore, the oxidative stress in the intestines was improved by increasing the GPX-4 and SOD-2 signaling. <b><i>Conclusion:</i></b> Our findings suggest that GLP-2 could ameliorate age-associated bone loss, tight junction structure, and improved antioxidant enzyme activity in the gut in SAMP6 mice. Amelioration of gut barrier dysfunction may potentially contribute to improving bone formation and provide evidence for targeting the entero-bone axis in the treatment of senile osteoporosis.
DOI: 10.6084/m9.figshare.21673172
title: Supplementary Material for: Dose-Response Relationship between Red Blood Cell Distribution Width and In-Hospital Mortality in Oldest Old Patients with Acute Ischemic Stroke

description: <b><i>Introduction:</i></b> It is crucial to identify predictors of mortality in the early stage of acute ischemic stroke for the oldest old (aged ≥80 years) because of their poor overall survival outcomes. However, limited data are available as the oldest old have often been excluded from previous clinical studies. Hence, we aimed to assess the predictive effect of red blood cell distribution width on in-hospital mortality and the dose-response relationship between the red blood cell distribution width and in-hospital mortality in oldest old with acute ischemic stroke. <b><i>Methods:</i></b> A retrospective cohort study was performed in two tertiary hospitals. Patients aged ≥80 years admitted due to acute ischemic stroke from January 1, 2014, to January 31, 2020, were included in the study. We divided the eligible patients into 3 groups with tertiles of red blood cell distribution width. Restrictive cubic spline and robust locally weighted regression analysis were performed to test the dose-response relationship between red blood cell distribution width and the in-hospital mortality risk. All-cause in-hospital mortality was the main study outcome. <b><i>Results:</i></b> Overall, 606 patients were included in the final analysis. Red blood cell distribution width was categorized into 3 groups (T1: &lt;13.7%, T2: 13.8–15.7%, and T3: &gt;15.7%). The rationality of this categorization was then validated with restricted cubic spline and robust locally regression smoothing scatterplot, respectively. After adjusting for demographic and clinical features, a higher red blood cell distribution width was independently associated with in-hospital mortality and the hazard ratio (HR) was 3.31 (95% CI 2.47–4.45, <i>p</i> &lt; 0.001). There was a positive dose-response relationship between red blood cell distribution width and mortality risk. Sensitivity analysis identified no conspicuous change in the HR. <b><i>Conclusions:</i></b> Red blood cell distribution width may be a valuable and simple measure for predicting in-hospital mortality in oldest old patients with acute ischemic stroke.
DOI: 10.5257/iea/wes/2019
title: World Energy Statistics (2019 Edition)

description: World Energy Statistics provides comprehensive world energy statistics on all energy sources - coal, gas, oil, electricity, renewables and waste. It covers energy supply and consumption for 150 countries and regions, including all OECD countries, over 100 other key energy-producing and -consuming countries, as well as world totals and various regional aggregates. The dataset includes detailed tables by country in original units, and summary time-series on production, trade, and final consumption by sector.
DOI: 10.15468/dl.3jwjg9
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-115.77393 36.20882,-106.28174 36.20882,-106.28174 43.83453,-115.77393 43.83453,-115.77393 36.20882))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "TaxonKey is Frasera ackermaniae C.C.Newb. & Goodrich",
 "TaxonKey is Frasera gypsicola (Barneby) D.M.Post",
 "TaxonKey is Gentianella tortuosa (M.E.Jones) J.M.Gillett",
 "TaxonKey is Hymenoclea sandersonii (S.L.Welsh) N.H.Holmgren"
 ]
 }
 ]
}

 The dataset includes 68 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0311627-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b4t3gc
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boswellia bhaw-dajiana Birdw."
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078566-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vn6797
title: Occurrence Download

description: A dataset containing 2458442 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Guatemala"
 ]
}

 The dataset includes 2458442 records from 1070 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260022-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4xgdju
title: Occurrence Download

description: A dataset containing 195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-1030.0",
 "Geometry POLYGON((-142.44139 13.53515,-48.69141 13.53515,-48.69141 57.83202,-142.44139 57.83202,-142.44139 13.53515))",
 "TaxonKey is Myriophyllum spicatum L."
 ]
}

 The dataset includes 195 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073992-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hdptha
title: Occurrence Download

description: A dataset containing 1338 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Delphinium anthriscifolium Hance)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1338 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051850-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pnsn6q
title: Occurrence Download

description: A dataset containing 15251 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Misgurnus anguillicaudatus (Cantor, 1842)"
 ]
}

 The dataset includes 15251 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0311629-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p5qed9
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erysimum benthamii P.Monnet",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 72 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322325-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zucmye
title: Occurrence Download

description: A dataset containing 14138128 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is China",
 "Country is Hong Kong",
 "Country is Macao",
 "Country is Chinese Taipei"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 14138128 records from 1901 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260020-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.22721423
title: Additional file 7 of E. urophylla × E. grandis high-quality genome and comparative genomics provide insights on evolution and diversification of eucalyptus

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.22721414
title: Additional file 4 of E. urophylla × E. grandis high-quality genome and comparative genomics provide insights on evolution and diversification of eucalyptus

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.22721417.v1
title: Additional file 5 of E. urophylla × E. grandis high-quality genome and comparative genomics provide insights on evolution and diversification of eucalyptus

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.22721423.v1
title: Additional file 7 of E. urophylla × E. grandis high-quality genome and comparative genomics provide insights on evolution and diversification of eucalyptus

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.22721420
title: Additional file 6 of E. urophylla × E. grandis high-quality genome and comparative genomics provide insights on evolution and diversification of eucalyptus

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.22721432
title: Additional file 10 of E. urophylla × E. grandis high-quality genome and comparative genomics provide insights on evolution and diversification of eucalyptus

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.22721426.v1
title: Additional file 8 of E. urophylla × E. grandis high-quality genome and comparative genomics provide insights on evolution and diversification of eucalyptus

description: Supplementary Material 8
DOI: 10.6084/m9.figshare.22721432.v1
title: Additional file 10 of E. urophylla × E. grandis high-quality genome and comparative genomics provide insights on evolution and diversification of eucalyptus

description: Supplementary Material 10