cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0110706.10fu
title: SH0110706.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive118919.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0110707.10fu
title: SH0110707.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive118920.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0110708.10fu
title: SH0110708.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive118920.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118921.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0110709.10fu
title: SH0110709.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive118921.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118922.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0110710.10fu
title: SH0110710.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive118922.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118923.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118923.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118924.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0110711.10fu
title: SH0110711.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25326/780
title: ACROSS_LISA_SIRTA_CRI_PM1_1-H_L3

description: The complex refractive index (n-ik) was retrieved based on optical calculations using as input the spectral absorption and scattering coefficients and the number particle size distribution measured at the surface for the PM1 fraction at the ground–based SIRTA peri-urban site during the ACROSS field campaign. Used datasets for the retrieval are: ACROSS_LSCE_SIRTA_MPSS_L2 from this catalogue; absorption and scattering coefficient measurements can be requested from https://sirta.ipsl.fr/. 

Data are provided at 1 hour temporal resolution and at seven wavelengths between 370 and 950 nm. The standard deviation indicates the uncertainty of the complex refractive index retrieval. The methodology and results are presented in Di Antonio et al. (2024). 


Di Antonio, L., Di Biagio, C., Formenti, P., Gratien, A., Michoud, V., Cantrell, C., Bauville, A., Bergé, A., Cazaunau, M., Chevaillier, S., Cirtog, M., Coll, P., D'Anna, B., de Brito, J. F., De Haan, D. O., Dignum, J. R., Deshmukh, S., Favez, O., Flaud, P.-M., Gaimoz, C., Hawkins, L. N., Kammer, J., Language, B., Maisonneuve, F., Močnik, G., Perraudin, E., Petit, J.-E., Acharja, P., Poulain, L., Pouyes, P., Pronovost, E. D., Riffault, V., Roundtree, K. I., Shahin, M., Siour, G., Villenave, E., Zapf, P., Foret, G., Doussin, J.-F., and Beekmann, M.: Aerosol spectral optical properties in the Paris urban area, and its peri−urban and forested surroundings during summer 2022 from ACROSS surface observations, EGUsphere [preprint], https://doi.org/10.5194/egusphere-2024-2299, 2024.
DOI: 10.25326/781
title: ACROSS_LISA_SIRTA_SSA_PM1_1-H_L3

description: The single scattering albedo (SSA) was retrieved from the spectral absorption and scattering coefficients measured at the surface for the PM1 fraction at the ground–based SIRTA peri-urban site during the ACROSS field campaign (absorption and scattering coefficient measurements can be requested from https://sirta.ipsl.fr/). SSA uncertainty ranges on average within 11 %–45 % between 370 and 950 nm. Data are provided at 1 hour temporal resolution and at seven wavelengths between 370 and 950 nm.  The methodology and results are presented in Di Antonio et al. (2024).


Di Antonio, L., Di Biagio, C., Formenti, P., Gratien, A., Michoud, V., Cantrell, C., Bauville, A., Bergé, A., Cazaunau, M., Chevaillier, S., Cirtog, M., Coll, P., D'Anna, B., de Brito, J. F., De Haan, D. O., Dignum, J. R., Deshmukh, S., Favez, O., Flaud, P.-M., Gaimoz, C., Hawkins, L. N., Kammer, J., Language, B., Maisonneuve, F., Močnik, G., Perraudin, E., Petit, J.-E., Acharja, P., Poulain, L., Pouyes, P., Pronovost, E. D., Riffault, V., Roundtree, K. I., Shahin, M., Siour, G., Villenave, E., Zapf, P., Foret, G., Doussin, J.-F., and Beekmann, M.: Aerosol spectral optical properties in the Paris urban area, and its peri−urban and forested surroundings during summer 2022 from ACROSS surface observations, EGUsphere [preprint], https://doi.org/10.5194/egusphere-2024-2299, 2024.
DOI: 10.25326/543
title: ACROSS_LISA_WRF-CHIMERE_HYSPLIT_Backtraj_1H

description: HYSPLIT (Stein et al., 2015) backtrajectories simulations were performed at the Paris Rive Gauche (PRG), SIRTA and Rambouillet (RambForest) ground-based sites, using the WRF-CHIMERE (Menut et al., 2021) meteorological fields from the 6x6km and 2x2km spatial resolution nested domains as HYSPLIT backtrajectory meteorological model inputs (three nested domains centered over the Ile de France region at 30km, 6km and 2km have been deployed for the ACROSS campaign). The WRF-CHIMERE meteorological fields have 10 minutes temporal resolution. The dataset is grouped on a daily basis and contains four backtrajectories runs per day starting at 00, 06, 12 and 18 UTC and with a maximum duration of 48 hours. Two different options are available: 1) one single backtrajectory starting at 25 m, 10 m, 40 m agl respectively for the PRG, SIRTA and RambForest locations; 2) an ensemble backtrajectory simulation composed by 27 ensemble members. The 27 ensemble members include all the possible offset combinations due to perturbations in the initial meteorological data: ±1 grid point in the horizontal direction (X and Y directions), ±0.01 sigma units corresponding to ~±250m. The dataset contains the longitude, the latitude and the altitude of the simulated air parcel as backtrajectory, as well as the ambient pressure, temperature, relative humidity and specific humidity. All the dataset variables have 3D dimensions and depend on i) the number of runs per day (run_starting_time), ii) the number of backtrajectories simulated hours (ntime_backtraj) and iii) the number of trajectories (ntraj, 1 for single backtrajectory, 27 for the ensemble simulation). Missing data are possible if the air parcel leaves the simulated domain due to backtrajectories and have been identified as -999., -999 and “NA” respectively for float, integer and string variable types. Detailed information can be provided upon request to the authors.

Menut, L., Bessagnet, B., Briant, R., Cholakian, A., Couvidat, F., Mailler, S., Pennel, R., Siour, G., Tuccella, P., Turquety, S., and Valari, M.: The CHIMERE v2020r1 online chemistry-transport model, Geosci. Model Dev., 14, 6781–6811, https://doi.org/10.5194/gmd-14-6781-2021, 2021.

Stein, A.F., Draxler, R.R, Rolph, G.D., Stunder, B.J.B., Cohen, M.D., and Ngan, F., (2015). NOAA’s HYSPLIT atmospheric transport and dispersion modeling system, Bull. Amer. Meteor. Soc., 96, 2059-2077, http://dx.doi.org/10.1175/BAMS-D-14-00110.1
DOI: 10.25326/511
title: ACROSS_LPC2E_Rambforest_H2SO4_L2

description: H2SO4 was measured using NO3-CIMS with sampling inlet located on the roof of LPC2E container at about 3m height above the ground. Data were averaged for 4 minutes. The uncertainties given in the data file correspond to the measurement precision without accounting for the calibration uncertainty of 25% (2σ).
DOI: 10.25326/510
title: ACROSS_LPC2E_Rambforest_OH_L2

description: OH radicals were measured using CIMS with sampling inlet located on the roof of LPC2E container at about 3m height above the ground. Data were averaged for 12 minutes. The uncertainties given in the data file correspond to the measurement precision without accounting for the calibration uncertainty of 20% (2σ). Please note, that the OH diurnal profile is influenced by passing of the sampling inlet from the sun illuminated to shadowed conditions at about 11:30 a.m.
DOI: 10.25326/509
title: ACROSS_LPC2E_Rambforest_RO2_L2

description: Some of peroxy radicals, HO2+RO2, were measured using CIMS with sampling inlet located on the roof of LPC2E container at about 3m height above the ground. Data were averaged for 4 minutes. The uncertainties given in the data file correspond to the measurement precision without accounting for the calibration uncertainty of about 30% (2σ) for HO2 and CH3O2.
DOI: 10.15468/dl.oxirh3
title: Occurrence Download

description: A dataset containing 4778 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is SO-Polylist"
 ]
}

 The dataset includes 4778 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042200-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghe3my
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pieris balcana Lorkovic, 1970"
 ]
}

 The dataset includes 48 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136626-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kdtvn8
title: Occurrence Download

description: A dataset containing 9445 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Antirrhinum latifolium Mill."
 ]
}

 The dataset includes 9445 records from 176 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083678-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hdp8sm
title: Occurrence Download

description: A dataset containing 1666 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euchloe belemia (Esper, 1800)"
 ]
}

 The dataset includes 1666 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136612-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kknv0s
title: Occurrence Download

description: A dataset containing 319 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aster tongolensis Franch."
 ]
}

 The dataset includes 319 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042201-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wqvr29
title: Occurrence Download

description: A dataset containing 668 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "StateProvince is one of (cauca)",
 "TaxonKey is one of (Siluriformes)"
 ]
 }
 ]
}

 The dataset includes 668 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083693-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7bx2rc
title: Occurrence Download

description: A dataset containing 5819 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is Formicidae",
 "Year 1948-2020"
 ]
}

 The dataset includes 5819 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096295-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvvc0d
title: Occurrence Download

description: A dataset containing 4782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 {
 "or" : [
 "DatasetKey is INPN - Données flore des CBN agrégées par la FCBN",
 "DatasetKey is Observations du Conservatoire botanique national du Bassin parisien."
 ]
 },
 "TaxonKey is Artemisia verlotiorum Lamotte"
 ]
}

 The dataset includes 4782 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042202-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d5a9km
title: Occurrence Download

description: A dataset containing 849 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abarema abbottii (Rose & Leonard) Barneby & J.W.Grimes, Abarema acreana (J.F.Macbr.) L.Rico, Abarema adenophora (Ducke) Barneby & J.W.Grimes, Abarema alexandri (Urb.) Barneby & J.W.Grimes, Abarema asplenifolia (Griseb.) Barneby & J.W.Grimes, Abarema auriculata (Benth.) Barneby & J.W.Grimes, Abarema barbouriana (Standl.) Barneby & J.W.Grimes, Abarema barnebyana Iganci & M.P.Lima, Abarema brachystachya (DC.) Barneby & J.W.Grimes, Abarema callejasii Barneby & J.W.Grimes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 849 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083691-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p1jaty
title: Occurrence Download

description: A dataset containing 3855 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Icota - Pelagant"
 ]
}

 The dataset includes 3855 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042203-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vuqbcp
title: Occurrence Download

description: A dataset containing 202759 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fallopia convolvulus (L.) Á.Löve",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 202759 records from 1182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083683-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ttw4d
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Odontarrhena subalpina (M.Bieb.) D.A.German",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001637-240202131308920/datasets/export for details.
DOI: 10.15468/dl.tx934a
title: Occurrence Download

description: A dataset containing 7170466 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is UK Butterfly Monitoring Scheme (UKBMS)"
 ]
}

 The dataset includes 7170466 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096300-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjmolu
title: Occurrence Download

description: A dataset containing 41966 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Tagged Seal Location Data from SOGLOBEC"
 ]
}

 The dataset includes 41966 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042205-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.