cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16318350
title: Table 2 in Description of a new species of Parancistrus (Siluriformes: Loricariidae) from the rio Xingu, Brazil

description: Table 2. Summary of differences between Parancistrus aurantiacus and P. nudiventris.
P. aurantiacusP. nudiventrisabdomenplatednakeddentary posterior processeslongshortstrong lateral ethmoid condylenoyesmetapterygoid channelshort, incompletelong, ending at articulation site with lateral ethmoidquadrate–metapterygoid connectionloose sutureabuttedopercleunexposedpartly exposed, bearing odontodesupper pharyngeal platesnot toothed, just crenulatedfully toothed on the contact area with the lower pharyngeal platebasipterygium anterior processstraightcurvedbasipterygia sutures23
description: Published as part of Rapp Py-Daniel, Lúcia H. & Zuanon, Jansen, 2005, Description of a new species of Parancistrus (Siluriformes: Loricariidae) from the rio Xingu, Brazil, pp. 576 in Neotropical Ichthyology 3 (4) on page 576, DOI: 10.1590/S1679-62252005000400014, http://zenodo.org/record/5417970
DOI: 10.5281/zenodo.16315182
title: Lumea Human – Foundational Archive for Real AGI (Raw Dataset)

description: This dataset contains the raw and unfiltered development material of the Lumea Human architecture – a full framework for Artificial General Intelligence (AGI) based on emotion, regulation, identity, and cognitive architecture.

 

The files include emails, sketches, patent ideas, emotional logic tables, runtime drafts, ethical governance structures, and philosophical reflections, created between 2023 and 2025 by Henrik Lehn.

Released under CC-BY-NC-ND 4.0, this archive serves as public intellectual timestamp and disclosure

No commercial use, modification, or redistribution allowed. Citation is permitted with proper attribution

This archive protects the origin of Lumea Human and its associated innovations.
DOI: 10.5281/zenodo.16315183
title: Lumea Human – Foundational Archive for Real AGI (Raw Dataset)

description: This dataset contains the raw and unfiltered development material of the Lumea Human architecture – a full framework for Artificial General Intelligence (AGI) based on emotion, regulation, identity, and cognitive architecture.

 

The files include emails, sketches, patent ideas, emotional logic tables, runtime drafts, ethical governance structures, and philosophical reflections, created between 2023 and 2025 by Henrik Lehn.

Released under CC-BY-NC-ND 4.0, this archive serves as public intellectual timestamp and disclosure

No commercial use, modification, or redistribution allowed. Citation is permitted with proper attribution

This archive protects the origin of Lumea Human and its associated innovations.
DOI: 10.15468/dl.t54uzj
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Conium maculatum",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028325-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rkv85n
title: Occurrence Download

description: A dataset containing 207 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Conium maculatum",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 207 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028326-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7cn847
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oryctolagus cuniculus",
 "Country is Romania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028327-250717081556266/datasets/export for details.
DOI: 10.15468/dl.ertnfd
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sporobolus africanus",
 "Country is Niue",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028328-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hvbkjx
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Impatiens hoehnelii",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 90 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028329-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jt3fsp
title: Occurrence Download

description: A dataset containing 6906 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Faxonius rusticus)"
 ]
}

 The dataset includes 6906 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028332-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jdz8dr
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is United States of America",
 "GadmGid is USA.24_1",
 "Geometry POLYGON((-105.80734 38.74807,-77.66641 38.74807,-77.66641 49.99807,-105.80734 49.99807,-105.80734 38.74807))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mustela nivalis"
 ]
}

 The dataset includes 33 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028331-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y534f7
title: Occurrence Download

description: A dataset containing 13321 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Osmorhiza longistylis"
 ]
}

 The dataset includes 13321 records from 212 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028330-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.84dj42
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ariamnes longissimus"
 ]
}

 The dataset includes 106 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028333-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.ign1e7xc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2496 records)
DOI: 10.15468/dl.c9hv94
title: Occurrence Download

description: A dataset containing 4351 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cottus ricei"
 ]
}

 The dataset includes 4351 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028334-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ykkpzf
title: Occurrence Download

description: A dataset containing 619 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corydalis cheilanthifolia"
 ]
}

 The dataset includes 619 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028335-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rmn3aq
title: Occurrence Download

description: A dataset containing 4488 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Plebejus argyrognomon"
 ]
}

 The dataset includes 4488 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028336-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5cesrx
title: Occurrence Download

description: A dataset containing 1004 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Conium maculatum",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1004 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028337-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29599q
title: Occurrence Download

description: A dataset containing 806 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Conium maculatum",
 "Country is Ukraine",
 "HasCoordinate is true"
 ]
}

 The dataset includes 806 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028339-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fc83u3
title: Occurrence Download

description: A dataset containing 2061 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Conium maculatum",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2061 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028338-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pz3hss
title: Occurrence Download

description: A dataset containing 283 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "TaxonKey is Spelaeornis chocolatinus"
 ]
}

 The dataset includes 283 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028341-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.df37aw
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oryctolagus cuniculus",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028340-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29618150
title: MetS_Afolabi.xlsx

description: Metabolic syndrome (MetS) has been defined by an array of biochemical, physiological, clinical, and metabolic factors that precisely foster the risk of atherosclerosis, type 2 diabetes mellitus (T2DM), cardiovascular diseases and all-cause mortality. It was earlier thought that MetS, a collection of several cardiovascular risk factors, was rare among the generality of sub-Saharan Black Africans. But contrary to this assumption, the prevalence of this disorder is relatively high and tends to increase with age. It has been suggested that the transition from traditional African diet and lifestyle to western diet and lifestyle has contributed to the perceived increase in metabolic disorders. Dyslipidemia, a combined metabolic disorder linked with high total cholesterol (TC) and/or triglyceride (TG) levels, high low-density lipoprotein cholesterol (LDL-C) and low high-density lipoprotein cholesterol (HDL-C), is a precursor of MetS, and it contributes to the risk factors for cardiovascular diseases, diabetes mellitus (DM) and atherosclerosis. Certain diseases have risk factors for MetS.
DOI: 10.6084/m9.figshare.29618150.v1
title: MetS_Afolabi.xlsx

description: Metabolic syndrome (MetS) has been defined by an array of biochemical, physiological, clinical, and metabolic factors that precisely foster the risk of atherosclerosis, type 2 diabetes mellitus (T2DM), cardiovascular diseases and all-cause mortality. It was earlier thought that MetS, a collection of several cardiovascular risk factors, was rare among the generality of sub-Saharan Black Africans. But contrary to this assumption, the prevalence of this disorder is relatively high and tends to increase with age. It has been suggested that the transition from traditional African diet and lifestyle to western diet and lifestyle has contributed to the perceived increase in metabolic disorders. Dyslipidemia, a combined metabolic disorder linked with high total cholesterol (TC) and/or triglyceride (TG) levels, high low-density lipoprotein cholesterol (LDL-C) and low high-density lipoprotein cholesterol (HDL-C), is a precursor of MetS, and it contributes to the risk factors for cardiovascular diseases, diabetes mellitus (DM) and atherosclerosis. Certain diseases have risk factors for MetS.
DOI: 10.6084/m9.figshare.29618177
title: Hooghiemstra, H. & Flantua S.G.A. (2025) World list of Quaternary pollen and spore atlases, an update. <i>Review of Palaeobotany and Palynology.</i>

description: In the past decades, numerous studies have focused on the morphological identification of fossil pollen grains and fern spores. This paper provides an updated compilation of regional Quaternary pollen and spore floras, categorized per continent. This list includes books, standalone papers, series under a common title, textbooks, and open access electronic pollen reference collections available at websites. Regional pollen floras cover diverse geographical scales, from urban areas and national parks to mountain areas and broader phytogeographical units. This update builds on the ‘World list of Quaternary pollen and spore atlases’ published in 1998, incorporating over 300 new references from 1998 to 2025, bringing the total number of references to almost 800. The quality of photographs varies much, pollen identification keys are not always provided, and some publications remain difficult to access. A thorough understanding of available printed literature and online pollen reference collections is essential for improving the accuracy of fossil pollen and spore identification.
DOI: 10.6084/m9.figshare.29618177.v1
title: Hooghiemstra, H. & Flantua S.G.A. (2025) World list of Quaternary pollen and spore atlases, an update. <i>Review of Palaeobotany and Palynology.</i>

description: In the past decades, numerous studies have focused on the morphological identification of fossil pollen grains and fern spores. This paper provides an updated compilation of regional Quaternary pollen and spore floras, categorized per continent. This list includes books, standalone papers, series under a common title, textbooks, and open access electronic pollen reference collections available at websites. Regional pollen floras cover diverse geographical scales, from urban areas and national parks to mountain areas and broader phytogeographical units. This update builds on the ‘World list of Quaternary pollen and spore atlases’ published in 1998, incorporating over 300 new references from 1998 to 2025, bringing the total number of references to almost 800. The quality of photographs varies much, pollen identification keys are not always provided, and some publications remain difficult to access. A thorough understanding of available printed literature and online pollen reference collections is essential for improving the accuracy of fossil pollen and spore identification.
DOI: 10.15468/dd.7x6vxh
title: Ensuring Pollinator Presence in Expanding Oil Crops: The Case of Mystrops debilis (Nitidulidae) and the Macauba Palm (Acrocomia aculeata, Arecaceae)

description: Records used in [paper](https://doi.org/10.1111/jen.13447) (dn)
DOI: 10.5285/da96a0e3306d44a398126403e5d3a654
title: EOCIS: Land Vegetation Parameters, V1

description: This dataset contains Land Vegetation Parameter data produced within the Earth Observation Climate Information Service (EOCIS) project. Two vegetation variables corresponding to the leaf area index (LAI) and the fraction of absorbed photosynthetically active radiation (fAPAR) are produced with associated quality control maps (QC) for the United Kingdom at 20m and 100m resolutions on both a 15 day and a monthly basis from April 2018 to December 2024. These data were produced by the LEAF toolbox (see documentation) from data acquired from the Multispectral Imager (MSI) on Sentinel-2. Gap-filled data are available for 100m spatial resolution at a 15-day temporal resolution.

The products can be mainly used for environmental monitoring and modelling. In particular, the produced data are suitable for 1) monitoring the spatial and temporal variability of the vegetation cover; including forests and crops, 2) parameterization, calibration, updating and validation of crop growth models commonly used for simulating the crop growth and predicting yield at field and regional scales, and 3) investigating the main patterns for future plans by decision makers.
DOI: 10.15468/dl.h5d6d7
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carduus pycnocephalus",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028342-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgcmgc
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Impatiens meruensis",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 95 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028345-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5524/100387
title: Supporting data for "Efficient generation of complete sequences of MDR-encoding plasmids by rapid assembly of MinION barcoding sequencing data"

description: Multidrug resistance (MDR)-encoding plasmids are considered major molecular vehicles responsible for transmission of antibiotic resistance genes among bacteria of the same or different species. Delineating the complete sequence of such plasmids could provide valuable insight into the evolution and transmission mechanisms underlying bacterial antibiotic resistance development. However, due to the presence of multiple repeats of IS elements, complete sequencing of MDR plasmids remains technically complicated, expensive and time consuming. 
<br>
Here, we demonstrate a rapid and efficient approach to obtain multiple MDR plasmid sequences through the use of the MinION nanopore sequencing platform, which is incorporated in a portable MinION device. By assembling the long sequencing reads generated by a single MinION run according to a rapid barcoding sequencing protocol, we obtained the complete sequence of 20 plasmids harbored by bacterial strains recovered from multiple samples. Importantly, single long reads covering a plasmid end-to-end were recorded, indicating that de novo assembly may be unnecessary if the single reads exhibit high accuracy. 
<br>
This workflow represents a novel, convenient and cost effective approach for systematic assessment of the full range of MDR plasmids responsible for causing failure in antimicrobial treatment of bacterial infections, offering for the first time the opportunity to perform detailed molecular epidemiological studies to probe the evolutionary and transmission routes / mechanisms of MDR-encoding elements.
DOI: 10.15468/dl.ypaeb7
title: Occurrence Download

description: A dataset containing 5769 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Acytolepis puspa"
 ]
}

 The dataset includes 5769 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028343-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69afg9
title: Occurrence Download

description: A dataset containing 105025 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oryctolagus cuniculus",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 105025 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028317-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3q45wy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crotalaria anagyroides",
 "Country is Niue",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028344-250717081556266/datasets/export for details.
DOI: 10.5281/zenodo.14024478
title: A robust workflow to benchmark deconvolution of multi-omic data - Datasets

description: References profiles and scRNAseq dataset used for the generation of in silico mixes to benchmark deconvolution methods;

Proportion matrix for the PaMIX dataset.

(https://github.com/bcm-uga/DeconvBenchmark/)




Dataset name
Omic
Tissue
Number of cell types
Publication


BrCL1
DNAm/RNA
Breast cancer
4


10.1016/j.celrep.2016.10.057 / 10.1371/journal.pcbi.1007510



PaCL1
DNAm/RNA
PDAC
5
cf deconbench.github.io


PaCL2
DNAm/RNA
PDAC
9
10.1101/2024.11.08.622633


BlCL
RNA
Whole blood
6
10.1371/journal.pone.0118528


BrCL2
RNA
Breast cancer
6
10.1186/s13059-023-03016-6


LuCL
DNAm
Lung cancer
9
10.1038/s41598-017-04248-w / 10.1371/journal.pone.0208915


PaMIX
DNAm/RNA
PDAC
9
10.1101/2024.11.08.622633


PaPB
scRNA
PDAC
15, restricted to 7
10.1038/s41422-019-0195-y
DOI: 10.5281/zenodo.15835454
title: A robust workflow to benchmark deconvolution of multi-omic data - Datasets

description: References profiles and scRNAseq dataset used for the generation of in silico mixes to benchmark deconvolution methods;

Proportion matrix for the PaMIX dataset.

(https://github.com/bcm-uga/DeconvBenchmark/)




Dataset name
Omic
Tissue
Number of cell types
Publication


BrCL1
DNAm/RNA
Breast cancer
4


10.1016/j.celrep.2016.10.057 / 10.1371/journal.pcbi.1007510



PaCL1
DNAm/RNA
PDAC
5
cf deconbench.github.io


PaCL2
DNAm/RNA
PDAC
9
10.1101/2024.11.08.622633


BlCL
RNA
Whole blood
6
10.1371/journal.pone.0118528


BrCL2
RNA
Breast cancer
6
10.1186/s13059-023-03016-6


LuCL
DNAm
Lung cancer
9
10.1038/s41598-017-04248-w / 10.1371/journal.pone.0208915


PaMIX
DNAm/RNA
PDAC
9
10.1101/2024.11.08.622633


PaPB
scRNA
PDAC
15, restricted to 7
10.1038/s41422-019-0195-y