cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9210404
title: Mapping of Research on Antimicrobial Resistance in Thailand (data set)

description: [1] Data file (CSV format) obtained from PubMed using the following search team on 17 December 2018<br>[2] Data file (MXL format) obtained from PubMed using the following search team on 17 December 2018 <br><br>{ Thailand and ((antibiotic-resistant or antimicrobial-resistant or AMR or AMU or drug-resistant or DRI or "antibiotic" or “antimicrobial”) or ((acinetobacter or pseudomonas or enterobacteriaceae or escherichia or klebsiella or enterococcus or staphylococcus or helicobacter or campylobacter or salmonella or neisseria or streptococcus or haemophilus or shigella) and (resistant or resistance or intermediate or susceptible or non-susceptible or susceptibility or non-susceptibility or ESBL)) or (“stewardship” [Title/Abstract])) and ("1999"[Date - Publication]: "2018"[Date - Publication]) NOT malaria [Title] NOT plasmodium [Title] NOT HIV [Title] NOT tuberculosis [Title] NOT 26799652 [uid] }<br>[3] Data file (xls format) of authors who published articles addressing AMR in Thailand on PubMed and had at least one Thailand affiliation
DOI: 10.6084/m9.figshare.9210398
title: Genome wide Association Study of Body Shape Related Traits in Large Yellow Croaker (Larimichthys crocea)

description: The large yellow croaker (<i>Larimichthys crocea</i>) is one of the most economically important marine culture fish mainly cultivated in the coastal areas of Southeast China. Body shape is an important economic trait for <i>L. crocea</i>, which playing a significant role in swimming, ingesting and avoiding predators. Moreover, due to the market preference of slender <i>L. crocea</i>, body shape has seriously impacted the economic benefits of the breeding industry. Thus, it’s vital to understand the genetic basis of body shape differentiation. Here, a total of 281 individuals from multiple families were genotyped using double-digest restriction-site associated DNA (ddRAD) strategies and retained 51,928 SNPs after quality control. We then performed genome-wide association study to identify SNP and genes potentially associated with body shape related traits including head length/body length ratio (HBR), body thickness/body length ratio (TLR), caudal peduncle depth/caudal peduncle length ratio (CPLHR), body mass index (BMI), body length/body height ratio (LHR), and body height/body thickness ratio (HTR). Twenty-seven SNPs on 11 LGs were identified to be significantly associated with body shape traits in GWAS. Candidate genes underlying body shape traits were identified surrounding the significant SNPs, including <i>start5</i>, <i>apt2</i>, <i>igfbps</i> and <i>ac1</i>, which identified with potential functions on lipid metabolism, energy metabolism, bone and other important regulatory pathways. Our results may provide insights into the genetic basis of body shape evolution and facilitate the molecular marker-assisted selection design of slender population large yellow croaker.
DOI: 10.6084/m9.figshare.9210404.v1
title: Mapping of Research on Antimicrobial Resistance in Thailand (data set)

description: [1] Data file (CSV format) obtained from PubMed using the following search team on 17 December 2018<br>[2] Data file (MXL format) obtained from PubMed using the following search team on 17 December 2018 <br><br>{ Thailand and ((antibiotic-resistant or antimicrobial-resistant or AMR or AMU or drug-resistant or DRI or "antibiotic" or “antimicrobial”) or ((acinetobacter or pseudomonas or enterobacteriaceae or escherichia or klebsiella or enterococcus or staphylococcus or helicobacter or campylobacter or salmonella or neisseria or streptococcus or haemophilus or shigella) and (resistant or resistance or intermediate or susceptible or non-susceptible or susceptibility or non-susceptibility or ESBL)) or (“stewardship” [Title/Abstract])) and ("1999"[Date - Publication]: "2018"[Date - Publication]) NOT malaria [Title] NOT plasmodium [Title] NOT HIV [Title] NOT tuberculosis [Title] NOT 26799652 [uid] }<br>[3] Data file (xls format) of authors who published articles addressing AMR in Thailand on PubMed and had at least one Thailand affiliation
DOI: 10.6084/m9.figshare.9210398.v1
title: Genome wide Association Study of Body Shape Related Traits in Large Yellow Croaker (Larimichthys crocea)

description: The large yellow croaker (<i>Larimichthys crocea</i>) is one of the most economically important marine culture fish mainly cultivated in the coastal areas of Southeast China. Body shape is an important economic trait for <i>L. crocea</i>, which playing a significant role in swimming, ingesting and avoiding predators. Moreover, due to the market preference of slender <i>L. crocea</i>, body shape has seriously impacted the economic benefits of the breeding industry. Thus, it’s vital to understand the genetic basis of body shape differentiation. Here, a total of 281 individuals from multiple families were genotyped using double-digest restriction-site associated DNA (ddRAD) strategies and retained 51,928 SNPs after quality control. We then performed genome-wide association study to identify SNP and genes potentially associated with body shape related traits including head length/body length ratio (HBR), body thickness/body length ratio (TLR), caudal peduncle depth/caudal peduncle length ratio (CPLHR), body mass index (BMI), body length/body height ratio (LHR), and body height/body thickness ratio (HTR). Twenty-seven SNPs on 11 LGs were identified to be significantly associated with body shape traits in GWAS. Candidate genes underlying body shape traits were identified surrounding the significant SNPs, including <i>start5</i>, <i>apt2</i>, <i>igfbps</i> and <i>ac1</i>, which identified with potential functions on lipid metabolism, energy metabolism, bone and other important regulatory pathways. Our results may provide insights into the genetic basis of body shape evolution and facilitate the molecular marker-assisted selection design of slender population large yellow croaker.
DOI: 10.6084/m9.figshare.9210320
title: PSFphot_LightCurves

description: Final light curves derived using PSF photometry fitting for O Ceti and IRC+10216 at both 450 micron and 850 micron
DOI: 10.6084/m9.figshare.9210320.v1
title: PSFphot_LightCurves

description: Final light curves derived using PSF photometry fitting for O Ceti and IRC+10216 at both 450 micron and 850 micron
DOI: 10.6084/m9.figshare.9210062
title: Lysine methyltransferase SETD6 modifies histones on a glycine-lysine motif

description: Although central to regulating the access to genetic information, most lysine methyltransferases remain poorly characterised relative to other family of enzymes. Herein, I report new substrates for the lysine methyltransferase SETD6. Based on the SETD6-catalysed site on the histone variant H2AZ, I identified similar sequences in the canonical histones H2A, H3, and H4 that are modified by SETD6 <i>in vitro</i>, and putative non-histone substrates. I herein expend the repertoire of substrates for methylation by SETD6.
DOI: 10.6084/m9.figshare.9210062.v1
title: Lysine methyltransferase SETD6 modifies histones on a glycine-lysine motif

description: Although central to regulating the access to genetic information, most lysine methyltransferases remain poorly characterised relative to other family of enzymes. Herein, I report new substrates for the lysine methyltransferase SETD6. Based on the SETD6-catalysed site on the histone variant H2AZ, I identified similar sequences in the canonical histones H2A, H3, and H4 that are modified by SETD6 <i>in vitro</i>, and putative non-histone substrates. I herein expend the repertoire of substrates for methylation by SETD6.
DOI: 10.6084/m9.figshare.9209831
title: Taxon-rich multigene phylogenetic analyses resolve the phylogenetic relationship among deep-branching Stramenopiles

description: Assembled transcripts of Incisomonas marina, Platysulcus tardus, and Pseudophyllomitus vesiculosus.
DOI: 10.6084/m9.figshare.9209543
title: Cultural Influence on Requirements Engineering Activities: A Systematic Literature Review and Analysis
DOI: 10.6084/m9.figshare.9209531
title: CCDB_8244.jpg

description: Golgi impregnated pyramidal neurons in the neocortex of an adult mouse. Contrast is reversed so that Golgi stain appears bright against the unstained background. A maximum intensity projection of the dataset is available in the thumbnail and by clicking the JPEG tab.
DOI: 10.6084/m9.figshare.9209531.v1
title: CCDB_8244.jpg

description: Golgi impregnated pyramidal neurons in the neocortex of an adult mouse. Contrast is reversed so that Golgi stain appears bright against the unstained background. A maximum intensity projection of the dataset is available in the thumbnail and by clicking the JPEG tab.
DOI: 10.6084/m9.figshare.9209519
title: Figure S12

description: Source data for Fig. S12. Individual stacks are labeled with H and a number, and are zipped separately. All available pxp analysis files are zipped together.
DOI: 10.6084/m9.figshare.9209513
title: Figure 2

description: Source data for Figure 2. Individual stacks are zipped in separate folders named H and a number. All pxp analysis files are zipped together.
DOI: 10.6084/m9.figshare.9209519.v1
title: Figure S12

description: Source data for Fig. S12. Individual stacks are labeled with H and a number, and are zipped separately. All available pxp analysis files are zipped together.
DOI: 10.6084/m9.figshare.9209504
title: Figure 1

description: Source data for Figure 1. Individual stacks are labeled with H and a number, and are zipped separately. All available pxp analysis files are zipped together.
DOI: 10.6084/m9.figshare.9209507
title: Figure 7

description: Source files for Figure 7. Individual stacks are zipped in separate folders named H and a number. All pxp analysis files are zipped together.
DOI: 10.6084/m9.figshare.9209510
title: NEBS Validation Dataset

description: This is an excel workbook that contains three datasets used in the NEBS validation study and one keycode sheet. 1. Original dataset of 361 participants2. Test-retest of 96 participants. 3. IONS Discovery Lab dataset4. Code for acronyms
DOI: 10.6084/m9.figshare.9209513.v2
title: Figure 2

description: Source data for Figure 2. Individual stacks are zipped in separate folders named H and a number. All pxp analysis files are zipped together.
DOI: 10.6084/m9.figshare.9209504.v2
title: Figure 1

description: Source data for Figure 1. Individual stacks are labeled with H and a number, and are zipped separately. All available pxp analysis files are zipped together.
DOI: 10.6084/m9.figshare.9209507.v2
title: Figure 7

description: Source files for Figure 7. Individual stacks are zipped in separate folders named H and a number. All pxp analysis files are zipped together.
DOI: 10.6084/m9.figshare.9209510.v2
title: NEBS Validation Dataset

description: This is an excel workbook that contains three datasets used in the NEBS validation study and one keycode sheet. 1. Original dataset of 361 participants2. Test-retest of 96 participants. 3. IONS Discovery Lab dataset4. Code for acronyms
DOI: 10.6084/m9.figshare.9209513.v1
title: Figure 2

description: Source data for Figure 2
DOI: 10.6084/m9.figshare.9209504.v1
title: Figure 1

description: Source data for Figure 1
DOI: 10.6084/m9.figshare.9209510.v1
title: NEBS Validation Dataset

description: This is an excel workbook that contains three datasets used in the NEBS validation study. 1. Original dataset of 361 participants2. Test-retest of 96 participants. 3. IONS Discovery Lab dataset
DOI: 10.6084/m9.figshare.9209501
title: Trajectory_coordinates_CSV

description: Trajectory coordinates from single molecule SNAP-GLP-1R TIRF microscopy experiments following stimulation with vehicle or 100 nM of the pharmacological agonists exendin-4, exendin-phe1 or exendin-asp3 in CHO-K1 cells.
DOI: 10.6084/m9.figshare.9209507.v1
title: Figure 7

description: Source files for Fig. 7
DOI: 10.6084/m9.figshare.9209486
title: Supplemental datasets for the manuscript entitled "Live-cell assays for cell stress responses reveal new patterns of cell signaling caused by mutations in rhodopsin, α-synuclein and TDP-43."

description: This supplemental dataset contains the CellProfiler scripts and raw image files form the manuscript entitled "Live-cell assays for cell stress responses reveal new patterns of cell signaling caused by mutations in rhodopsin, α-synuclein and TDP-43."
DOI: 10.6084/m9.figshare.9209501.v1
title: Trajectory_coordinates_CSV

description: Trajectory coordinates from single molecule SNAP-GLP-1R TIRF microscopy experiments following stimulation with vehicle or 100 nM of the pharmacological agonists exendin-4, exendin-phe1 or exendin-asp3 in CHO-K1 cells.
DOI: 10.6084/m9.figshare.9209477
title: Human shadowing events in the 60 GHz band: modeling the effect of multiple pedestrians

description: We modeled human-induced shadowing events, when 1-7 pedestrians block the line-of-sight (LOS) in an access point (AP) to user station (STA), operating at 60 GHz, for two types of scenarios: controlling the trajectories of pedestrians, and a non-controlled case. Deep shadowing events only occurred when pedestrians crossed the LOS in both cases, which means that the effect of blocking reflected or scattered signals was negligible. For the controlled scenario (when multiple pedestrians crossed the LOS simultaneously) we observed that once the closest positions to the STA were blocked, the effect of blocking the rest of the link were only marginal. We also tested two antenna-aiming strategies at the STA. We observed that once the antenna gain is normalized and oriented towards the AP, there are no significant penalties by aligning the antenna in the horizontal plane only. We also report results to parameterize single and sequences of shadow fades, that are useful for simulation purposes and to validate theoretical models
DOI: 10.6084/m9.figshare.9209477.v1
title: Human shadowing events in the 60 GHz band: modeling the effect of multiple pedestrians

description: We modeled human-induced shadowing events, when 1-7 pedestrians block the line-of-sight (LOS) in an access point (AP) to user station (STA), operating at 60 GHz, for two types of scenarios: controlling the trajectories of pedestrians, and a non-controlled case. Deep shadowing events only occurred when pedestrians crossed the LOS in both cases, which means that the effect of blocking reflected or scattered signals was negligible. For the controlled scenario (when multiple pedestrians crossed the LOS simultaneously) we observed that once the closest positions to the STA were blocked, the effect of blocking the rest of the link were only marginal. We also tested two antenna-aiming strategies at the STA. We observed that once the antenna gain is normalized and oriented towards the AP, there are no significant penalties by aligning the antenna in the horizontal plane only. We also report results to parameterize single and sequences of shadow fades, that are useful for simulation purposes and to validate theoretical models
DOI: 10.6084/m9.figshare.9209486.v2
title: Supplemental datasets for the manuscript entitled "Live-cell assays for cell stress responses reveal new patterns of cell signaling caused by mutations in rhodopsin, α-synuclein and TDP-43."

description: This supplemental dataset contains the CellProfiler scripts and raw image files form the manuscript entitled "Live-cell assays for cell stress responses reveal new patterns of cell signaling caused by mutations in rhodopsin, α-synuclein and TDP-43."
DOI: 10.6084/m9.figshare.9209486.v1
title: Supplemental datasets for the manuscript entitled "Combining Live-cell assays for cells stress and signaling to examine mutations associated with neurodegenerative disease."

description: This supplemental dataset contains the CellProfiler scripts and raw image files form the manuscript entitled "Combining Live-cell assays for cells stress and signaling to examine mutations associated with neurodegenerative disease."
DOI: 10.6084/m9.figshare.9209474
title: Human shadowing events in the 60 GHz band: modeling the effect of multiple pedestrians

description: We modeled human-induced shadowing events, when 1-7 pedestrians block the line-of-sight (LOS) in an access point (AP) to user station (STA), operating at 60 GHz, for two types of scenarios: controlling the trajectories of pedestrians, and a non-controlled case. Deep shadowing events only occurred when pedestrians crossed the LOS in both cases, which means that the effect of blocking reflected or scattered signals was negligible. For the controlled scenario (when multiple pedestrians crossed the LOS simultaneously) we observed that once the closest positions to the STA were blocked, the effect of blocking the rest of the link were only marginal. We also tested two antenna-aiming strategies at the STA. We observed that once the antenna gain is normalized and oriented towards the AP, there are no significant penalties by aligning the antenna in the horizontal plane only. We also report results to parameterize single and sequences of shadow fades, that are useful for simulation purposes and to validate theoretical models
DOI: 10.6084/m9.figshare.9209468
title: Human shadowing events in the 60 GHz band: modeling the effect of multiple pedestrians

description: We modeled human-induced shadowing events, when 1-7 pedestrians block the line-of-sight (LOS) in an access point (AP) to user station (STA), operating at 60 GHz, for two types of scenarios: controlling the trajectories of pedestrians, and a non-controlled case. Deep shadowing events only occurred when pedestrians crossed the LOS in both cases, which means that the effect of blocking reflected or scattered signals was negligible. For the controlled scenario (when multiple pedestrians crossed the LOS simultaneously) we observed that once the closest positions to the STA were blocked, the effect of blocking the rest of the link were only marginal. We also tested two antenna-aiming strategies at the STA. We observed that once the antenna gain is normalized and oriented towards the AP, there are no significant penalties by aligning the antenna in the horizontal plane only. We also report results to parameterize single and sequences of shadow fades, that are useful for simulation purposes and to validate theoretical models
DOI: 10.6084/m9.figshare.9209465
title: Human shadowing events in the 60 GHz band: modeling the effect of multiple pedestrians

description: We modeled human-induced shadowing events, when 1-7 pedestrians block the line-of-sight (LOS) in an access point (AP) to user station (STA), operating at 60 GHz, for two types of scenarios: controlling the trajectories of pedestrians, and a non-controlled case. Deep shadowing events only occurred when pedestrians crossed the LOS in both cases, which means that the effect of blocking reflected or scattered signals was negligible. For the controlled scenario (when multiple pedestrians crossed the LOS simultaneously) we observed that once the closest positions to the STA were blocked, the effect of blocking the rest of the link were only marginal. We also tested two antenna-aiming strategies at the STA. We observed that once the antenna gain is normalized and oriented towards the AP, there are no significant penalties by aligning the antenna in the horizontal plane only. We also report results to parameterize single and sequences of shadow fades, that are useful for simulation purposes and to validate theoretical models
DOI: 10.6084/m9.figshare.9209474.v1
title: Human shadowing events in the 60 GHz band: modeling the effect of multiple pedestrians

description: We modeled human-induced shadowing events, when 1-7 pedestrians block the line-of-sight (LOS) in an access point (AP) to user station (STA), operating at 60 GHz, for two types of scenarios: controlling the trajectories of pedestrians, and a non-controlled case. Deep shadowing events only occurred when pedestrians crossed the LOS in both cases, which means that the effect of blocking reflected or scattered signals was negligible. For the controlled scenario (when multiple pedestrians crossed the LOS simultaneously) we observed that once the closest positions to the STA were blocked, the effect of blocking the rest of the link were only marginal. We also tested two antenna-aiming strategies at the STA. We observed that once the antenna gain is normalized and oriented towards the AP, there are no significant penalties by aligning the antenna in the horizontal plane only. We also report results to parameterize single and sequences of shadow fades, that are useful for simulation purposes and to validate theoretical models
DOI: 10.6084/m9.figshare.9209468.v1
title: Human shadowing events in the 60 GHz band: modeling the effect of multiple pedestrians

description: We modeled human-induced shadowing events, when 1-7 pedestrians block the line-of-sight (LOS) in an access point (AP) to user station (STA), operating at 60 GHz, for two types of scenarios: controlling the trajectories of pedestrians, and a non-controlled case. Deep shadowing events only occurred when pedestrians crossed the LOS in both cases, which means that the effect of blocking reflected or scattered signals was negligible. For the controlled scenario (when multiple pedestrians crossed the LOS simultaneously) we observed that once the closest positions to the STA were blocked, the effect of blocking the rest of the link were only marginal. We also tested two antenna-aiming strategies at the STA. We observed that once the antenna gain is normalized and oriented towards the AP, there are no significant penalties by aligning the antenna in the horizontal plane only. We also report results to parameterize single and sequences of shadow fades, that are useful for simulation purposes and to validate theoretical models
DOI: 10.6084/m9.figshare.9209465.v1
title: SupplementaryFiles.zip

description: We modeled human-induced shadowing events, when 1-7 pedestrians block the line-of-sight (LOS) in an access point (AP) to user station (STA), operating at 60 GHz, for two types of scenarios: controlling the trajectories of pedestrians, and a non-controlled case. Deep shadowing events only occurred when pedestrians crossed the LOS in both cases, which means that the effect of blocking reflected or scattered signals was negligible. For the controlled scenario (when multiple pedestrians crossed the LOS simultaneously) we observed that once the closest positions to the STA were blocked, the effect of blocking the rest of the link were only marginal. We also tested two antenna-aiming strategies at the STA. We observed that once the antenna gain is normalized and oriented towards the AP, there are no significant penalties by aligning the antenna in the horizontal plane only. We also report results to parameterize single and sequences of shadow fades, that are useful for simulation purposes and to validate theoretical models
DOI: 10.6084/m9.figshare.9209420
title: Table 1 - Angiosperms of dry grasslands and savannahs of Jalapão, the largest conserved Cerrado area in Brazil

description: <b>Table 1.</b> Taxa, followed by habit and voucher, recorded in this study for the Jalapão region, Tocantins, Brazil, within open cerrado physiognomies with dry non-rocky soils. Voucher prefix is the herbarium acronym, followed by collector and collector number.