cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.45ae6g
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ancistrochilus thomsonianus (Rchb.f.) Rolfe"
 ]
}

 The dataset includes 43 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047203-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8352ep
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calanthe clavicalcar J.J.Sm."
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047310-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.887snk
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calanthe moluccensis J.J.Sm."
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048275-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9sje53
title: Occurrence Download

description: A dataset containing 517 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spathoglottis pubescens Lindl."
 ]
}

 The dataset includes 517 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048807-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mu723
title: Occurrence Download

description: A dataset containing 756797 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Anura",
 "Year 2014-2018"
 ]
}

 The dataset includes 756797 records from 1011 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080971-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g9g4c4
title: Occurrence Download

description: A dataset containing 317998699 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "BasisOfRecord is one of (Human Observation, Literature Occurrence, Living Specimen, Observation, Specimen, Occurrence evidence)",
 "Year is greater than or equal to 2019",
 "Year is less than or equal to 2020",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 317998699 records from 970 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0356128-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.escu83
title: Occurrence Download

description: A dataset containing 1668828179 species occurrences available in GBIF matching the query:
{
 "OccurrenceStatus" : [
 "is Present"
 ]
}

 The dataset includes 1668828179 records from 35679 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0265948-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14266866
title: The Gonzo Dataset: Human Brain MRI Data of CSF Tracer Evolution Over 72h For Data-Integrated Simulations
title: Human Brain MRI Data of CSF Tracer Evolution Over 72h For Data-Integrated Simulations
title: The Gonzo MRI Dataset

description: We present the Gonzo dataset: brain MRI and derivative data of one healthy-appearing male human volunteer before and during the 72 hours after injection of the contrast agent gadobutrol into the cerebrospinal fluid (CSF) of the spinal canal (intrathecal injection). The data records show the temporal and spatial evolution of the contrast agent in CSF, brain, and adjacent structures. The MRI data includes T1-weighted images, Look-Locker inversion recovery (LL, a technique to determine T1 values), a mixed inversion-recovery spin-echo sequence (Mixed) for all time points (one pre-contrast and four post-contrast acquisitions) and, in addition, T2-weighted, FLAIR, and dynamic DTI data for the pre-contrast session. In addition to raw data, we provide derivatives with the goal of allowing for numerical simulations of the studied tracer transport process. This includes T1 maps (from LL and Mixed) and tracer concentration maps, diffusion tensor maps, as well as unstructured triangulated volume meshes of the brain geometry and associated field data (MRI and derived data mapped onto the computational mesh). We provide brain region markers obtained with a FreeSurfer-based analysis pipeline. An initial regional statistical analysis of the data is presented. The data can be used to study the transport behaviour and the underlying processes of a tracer in the human brain. Tracer transport is both relevant to study water transport as well as new pathways for drug delivery. The composition of the data set allows both reuse by the image processing and the simulation science communities. The dataset is meant to contribute and inspire new studies into the understanding of transport processes in the brain and into method development regarding image analysis and simulation of transport processes.

 

Full data descriptor is available at: https://doi.org/10.1101/2025.07.23.25331971

Repositories with custom software used in the post-processing and usage example:



https://github.com/jorgenriseth/gonzo

https://github.com/jorgenriseth/gMRI2FEM

https://github.com/timokoch/dumux-braindiffusion-miniapp
DOI: 10.5281/zenodo.14266867
title: The Gonzo Dataset: Human Brain MRI Data of CSF Tracer Evolution Over 72h For Data-Integrated Simulations
title: Human Brain MRI Data of CSF Tracer Evolution Over 72h For Data-Integrated Simulations
title: The Gonzo MRI Dataset

description: We present the Gonzo dataset: brain MRI and derivative data of one healthy-appearing male human volunteer before and during the 72 hours after injection of the contrast agent gadobutrol into the cerebrospinal fluid (CSF) of the spinal canal (intrathecal injection). The data records show the temporal and spatial evolution of the contrast agent in CSF, brain, and adjacent structures. The MRI data includes T1-weighted images, Look-Locker inversion recovery (LL, a technique to determine T1 values), a mixed inversion-recovery spin-echo sequence (Mixed) for all time points (one pre-contrast and four post-contrast acquisitions) and, in addition, T2-weighted, FLAIR, and dynamic DTI data for the pre-contrast session. In addition to raw data, we provide derivatives with the goal of allowing for numerical simulations of the studied tracer transport process. This includes T1 maps (from LL and Mixed) and tracer concentration maps, diffusion tensor maps, as well as unstructured triangulated volume meshes of the brain geometry and associated field data (MRI and derived data mapped onto the computational mesh). We provide brain region markers obtained with a FreeSurfer-based analysis pipeline. An initial regional statistical analysis of the data is presented. The data can be used to study the transport behaviour and the underlying processes of a tracer in the human brain. Tracer transport is both relevant to study water transport as well as new pathways for drug delivery. The composition of the data set allows both reuse by the image processing and the simulation science communities. The dataset is meant to contribute and inspire new studies into the understanding of transport processes in the brain and into method development regarding image analysis and simulation of transport processes.

 

Full data descriptor is available at: https://doi.org/10.1101/2025.07.23.25331971

Repositories with custom software used in the post-processing and usage example:



https://github.com/jorgenriseth/gonzo

https://github.com/jorgenriseth/gMRI2FEM

https://github.com/timokoch/dumux-braindiffusion-miniapp
DOI: 10.15468/dl.ac8uw8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucalyptus camaldulensis",
 "Country is Zambia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005549-250802193616735/datasets/export for details.
DOI: 10.15468/dl.rwd8b6
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neoscopelarchoides dubius"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005550-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsys2q
title: Occurrence Download

description: A dataset containing 1713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Harpactes wardi)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 1713 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005551-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a3b64v
title: Occurrence Download

description: A dataset containing 9800 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vicia hirsuta",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9800 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005552-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m6k9v2
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pterocarpus hayesii)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 124 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005554-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mhf25n
title: Occurrence Download

description: A dataset containing 2381 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vicia hirsuta",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2381 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005553-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5ntbj
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sargochromis carlottae)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 87 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005555-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16733226
title: Presentation on Open Science & FAIR Data PhD Course

description: This presentation was prepared in accordance with the Open Science & FAIR Data PhD course organised by Dr. Mariarita de Luca and held by Area Science Park in Trieste. The DOI of the lectures slides are the following:

Lecture 1 → 10.5281/zenodo.15699658

Lecture 2 → 10.5281/zenodo.15856881

Lecture 3 → 10.5281/zenodo.15965110
DOI: 10.5281/zenodo.16733227
title: Presentation on Open Science & FAIR Data PhD Course

description: This presentation was prepared in accordance with the Open Science & FAIR Data PhD course organised by Dr. Mariarita de Luca and held by Area Science Park in Trieste. The DOI of the lectures slides are the following:

Lecture 1 → 10.5281/zenodo.15699658

Lecture 2 → 10.5281/zenodo.15856881

Lecture 3 → 10.5281/zenodo.15965110
DOI: 10.15468/dl.ztu8yj
title: Occurrence Download

description: A dataset containing 370 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vicia hirsuta",
 "Country is Slovakia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 370 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005556-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x64dp3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Gallinago media)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005560-250802193616735/datasets/export for details.
DOI: 10.15468/dl.gqu24w
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Gallinago media)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005559-250802193616735/datasets/export for details.
DOI: 10.15468/dl.uuu3xn
title: Occurrence Download

description: A dataset containing 684 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Gallinago media)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 684 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005558-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4vmadu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ipomoea purpurea",
 "Country is Angola",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005561-250802193616735/datasets/export for details.
DOI: 10.15468/dl.zqtcb2
title: Occurrence Download

description: A dataset containing 46216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Harpagus bidentatus)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 46216 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005557-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29817059
title: Raman spectroscopy of a microbialite sample in Laguna Pozo Bravo

description: Raman spectroscopy analysis was performed on a microbialite sample from Laguna Pozo Bravo to assess mineralogical variations through both macro- and microscopic observations. Spectra were acquired using backscattering geometry with a LabRam HR Evolution Raman microspectrometer, set to a resolution of 0.4 cm<sup>−1</sup> and equipped with a He-Ne laser line (633 nm) at INQUIMAE (UBA-CONICET), Buenos Aires, Argentina. Beam power and acquisition times were optimised for each sample to obtain informative spectra without causing sample alteration. Spectra were recorded using a 50× microscope objective (spatial resolution of approximately 1 μm), with an exposure time of 10-30 s and three accumulations. For band identification, we consulted the RRUFF database (https://rruff.info) and complemented this data with detailed mode assignments from Post, J. <i>et al.</i>
DOI: 10.6084/m9.figshare.29817059.v1
title: Raman spectroscopy of a microbialite sample in Laguna Pozo Bravo

description: Raman spectroscopy analysis was performed on a microbialite sample from Laguna Pozo Bravo to assess mineralogical variations through both macro- and microscopic observations. Spectra were acquired using backscattering geometry with a LabRam HR Evolution Raman microspectrometer, set to a resolution of 0.4 cm<sup>−1</sup> and equipped with a He-Ne laser line (633 nm) at INQUIMAE (UBA-CONICET), Buenos Aires, Argentina. Beam power and acquisition times were optimised for each sample to obtain informative spectra without causing sample alteration. Spectra were recorded using a 50× microscope objective (spatial resolution of approximately 1 μm), with an exposure time of 10-30 s and three accumulations. For band identification, we consulted the RRUFF database (https://rruff.info) and complemented this data with detailed mode assignments from Post, J. <i>et al.</i>
DOI: 10.15468/dl.2xvjgm
title: Occurrence Download

description: A dataset containing 16548 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-115.1647 37.65684,-115.378 37.67373,-115.4271 37.50599,-115.4504 37.61634,-115.6779 37.54731,-115.5296 37.24377,-115.7473 37.02409,-116.0185 37.27166,-115.928 36.99763,-115.9906 36.93546,-116.6995 36.9972,-116.8065 37.28315,-116.9092 37.19524,-117.0246 37.43963,-117.1808 37.52838,-117.879 37.40723,-117.9617 37.28309,-117.8731 37.28723,-117.7944 37.07732,-117.9544 37.00084,-117.9515 36.88746,-117.8227 36.66252,-117.5905 36.53221,-117.702 36.54888,-117.7001 36.33985,-117.8002 36.52408,-117.9937 36.60588,-118.0845 36.84138,-118.2462 36.70385,-118.0401 36.46577,-117.8747 35.6612,-118.1077 35.52994,-118.0064 35.30001,-118.067 35.21965,-118.7917 34.78093,-118.4387 34.71956,-117.4643 34.26589,-117.1769 34.41801,-116.4889 34.32896,-116.5167 34.16457,-116.3997 34.13626,-116.4803 34.10575,-116.3148 34.09686,-115.9023 33.67817,-115.4918 33.71225,-115.3721 33.95609,-115.2841 33.87187,-115.5649 34.39096,-115.3579 34.50802,-115.2336 34.50913,-115.1734 34.281,-115.0287 34.49015,-114.9045 34.48742,-114.8483 34.31828,-114.0637 34.52534,-113.7549 34.46349,-113.6928 34.6298,-113.9285 34.76649,-114.0439 35.11463,-113.8177 35.22367,-113.8187 35.40141,-113.7145 35.4153,-113.8815 35.71407,-114.0844 35.81357,-113.816 36.22755,-113.7161 36.52703,-113.7669 36.72443,-113.3502 36.84576,-113.2794 37.29557,-113.8386 37.20913,-113.9632 37.38364,-114.3332 37.26329,-114.575 37.38097,-114.8029 37.22457,-114.8184 37.32927,-114.9423 37.28012,-115.1626 37.47778,-115.1647 37.65684))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Petrochelidon pyrrhonota"
 ]
}

 The dataset includes 16548 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005562-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f2pckz
title: Occurrence Download

description: A dataset containing 5579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Harpia harpyja)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 5579 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005564-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y3vs4k
title: Occurrence Download

description: A dataset containing 520 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Benthodesmus elongatus"
 ]
}

 The dataset includes 520 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005563-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7bfsav
title: Occurrence Download

description: A dataset containing 209 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vicia hirsuta",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 209 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005566-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uaagt5
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pterocarpus orbiculatus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 133 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005565-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.