cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ytbxk5
title: Occurrence Download

description: A dataset containing 319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "StateProvince is Galicia",
 "TaxonKey is Cortaderia selloana"
 ]
}

 The dataset includes 319 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008603-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/js4c68t4v6.1
title: How Décollement Properties Asymmetry Govern Orogenic Wedge Evolution: Insights From Finite-Element Models from the Kuqa Foreland Basin, Central Asia

description: Reference model code of the model result (all models can be modified based on the reference model.). And the model set up and key result figure.
DOI: 10.15468/dl.bt4gpk
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyclosternum fasciatum"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008604-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/ms5phkw8sr
title: BSL-Static-48: A Dataset of Anonymized Images and MediaPipe Hand Landmarks for BSL Recognition

description: This dataset provides a collection of images and extracted landmark features for 48 fundamental static signs in Bangla Sign Language (BSL), including 38 alphabets and 10 digits (0-9). It was created to support research in isolated sign language recognition (SLR) for BSL and provide a benchmark resource for the research community. In total, the dataset comprises 14,566 raw images, 14,566 mirrored images, and 29,132 processed feature samples.

Data Contents:
The dataset is organized into two main folders:
01_Images: Contains 29,132 images in .jpg format (14,566 raw + 14,566 mirrored).
 • Raw_Images: Contains 14,566 original images collected from participants.
 • Mirrored_Images: Contains 14,566 horizontally flipped versions of the raw images for data augmentation purposes.
 • Privacy Note: Facial regions in all images within this folder have been anonymized (blurred) to protect participant privacy, as formal 
 informed consent for sharing identifiable images was not obtained prior to collection.


02_Processed_Features_NPY: Contains 29,132 126-dimensional hand landmark features saved as NumPy arrays in .npy format.
Features were extracted using MediaPipe Holistic (capturing 21 landmarks each for the left and right hands, resulting in 63 + 63 = 126 features per image).
These feature files are pre-split into train (23,293 samples), val (2,911 samples), and test (2,928 samples) subdirectories (approximately 80%/10%/10%) for standardized model evaluation and benchmarking .


Data Collection: Images were collected from 5 volunteers using a Macbook Air M3 camera. Data collection took place indoors under room lighting conditions against a white background. Images were captured manually using a Python script to ensure clarity.

Potential Use: Researchers can utilize the anonymized raw and mirrored images (01_Images) to develop or test novel feature extraction techniques or multimodal recognition systems. Alternatively, the pre-processed and split .npy feature files (02_Processed_Features_NPY) can be directly used to efficiently train and evaluate machine learning models for static BSL recognition, facilitating reproducible research and benchmarking.

Further Details: Please refer to the README.md file included within the dataset for detailed class mapping (e.g., L1='অ', D0='০'), comprehensive file statistics per class , specifics on the data processing pipeline, and citation guidelines.
DOI: 10.17632/ms5phkw8sr.1
title: BSL-Static-48: A Dataset of Anonymized Images and MediaPipe Hand Landmarks for BSL Recognition

description: This dataset provides a collection of images and extracted landmark features for 48 fundamental static signs in Bangla Sign Language (BSL), including 38 alphabets and 10 digits (0-9). It was created to support research in isolated sign language recognition (SLR) for BSL and provide a benchmark resource for the research community. In total, the dataset comprises 14,566 raw images, 14,566 mirrored images, and 29,132 processed feature samples.

Data Contents:
The dataset is organized into two main folders:
01_Images: Contains 29,132 images in .jpg format (14,566 raw + 14,566 mirrored).
 • Raw_Images: Contains 14,566 original images collected from participants.
 • Mirrored_Images: Contains 14,566 horizontally flipped versions of the raw images for data augmentation purposes.
 • Privacy Note: Facial regions in all images within this folder have been anonymized (blurred) to protect participant privacy, as formal 
 informed consent for sharing identifiable images was not obtained prior to collection.


02_Processed_Features_NPY: Contains 29,132 126-dimensional hand landmark features saved as NumPy arrays in .npy format.
Features were extracted using MediaPipe Holistic (capturing 21 landmarks each for the left and right hands, resulting in 63 + 63 = 126 features per image).
These feature files are pre-split into train (23,293 samples), val (2,911 samples), and test (2,928 samples) subdirectories (approximately 80%/10%/10%) for standardized model evaluation and benchmarking .


Data Collection: Images were collected from 5 volunteers using a Macbook Air M3 camera. Data collection took place indoors under room lighting conditions against a white background. Images were captured manually using a Python script to ensure clarity.

Potential Use: Researchers can utilize the anonymized raw and mirrored images (01_Images) to develop or test novel feature extraction techniques or multimodal recognition systems. Alternatively, the pre-processed and split .npy feature files (02_Processed_Features_NPY) can be directly used to efficiently train and evaluate machine learning models for static BSL recognition, facilitating reproducible research and benchmarking.

Further Details: Please refer to the README.md file included within the dataset for detailed class mapping (e.g., L1='অ', D0='০'), comprehensive file statistics per class , specifics on the data processing pipeline, and citation guidelines.
DOI: 10.5281/zenodo.18207470
title: Dataset and code for ecosystem function paper

description: This repository contains the datasets and code associated with the manuscript, 'Decoupling Biotic Interactions from Ecosystem Functions in a Carrion Resource Pulse'. For inquiries regarding this repository, please contact the corresponding author, Syuan-Jyun Sun (sjs243@ntu.edu.tw).
DOI: 10.5281/zenodo.18207471
title: Dataset and code for ecosystem function paper

description: This repository contains the datasets and code associated with the manuscript, 'Decoupling Biotic Interactions from Ecosystem Functions in a Carrion Resource Pulse'. For inquiries regarding this repository, please contact the corresponding author, Syuan-Jyun Sun (sjs243@ntu.edu.tw).
DOI: 10.15468/dl.wyv9yw
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alchemilla marsica Buser",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0286576-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r92c9a
title: Occurrence Download

description: A dataset containing 283100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pimpinella saxifraga L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 283100 records from 603 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262341-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wx6er4
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erigeron paolii Gamisans",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 85 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0296669-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.va2sr2
title: Occurrence Download

description: A dataset containing 15024 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alchemilla mollis (Buser) Rothm.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15024 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0286593-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vfyvta
title: Occurrence Download

description: A dataset containing 18658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cirsium rivulare (Jacq.) All.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 18658 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0293884-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uur7yv
title: Occurrence Download

description: A dataset containing 4807 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scorzonera angustifolia L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4807 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0288962-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vxthgd
title: Occurrence Download

description: A dataset containing 14992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus hirsutus L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 14992 records from 308 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0301076-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y2dm96
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Noccaea germanii Al-Shehbaz",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0154951-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tk7bba
title: Occurrence Download

description: A dataset containing 146742 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Populus nigra L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 146742 records from 559 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0346120-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r9uut3
title: Occurrence Download

description: A dataset containing 27544 records in GBIF matching the query:

 SELECT gbifid, datasetkey, specieskey, kingdom, phylum, class, "order", family, genus, species, scientificname, decimallatitude, decimallongitude, eventdate, institutioncode, "year" AS obs_year, basisofrecord, coordinateuncertaintyinmeters, issue
 FROM occurrence
 WHERE
 decimallatitude IS NOT NULL
 AND decimallongitude IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND coordinateuncertaintyinmeters IS NOT NULL
 AND coordinateuncertaintyinmeters &gt; 0
 AND coordinateuncertaintyinmeters &lt;= 200.0
 AND decimallatitude &gt;= 56.135291543055025
 AND decimallatitude &lt;= 61.2993700571118
 AND decimallongitude &gt;= -174.0293354903781
 AND decimallongitude &lt;= -151.10571395540134
 AND GBIF_Within('POLYGON ((-151.105714 56.135292, -151.105714 61.299370, -174.029335 61.299370, -174.029335 56.135292, -151.105714 56.135292))', decimallatitude, decimallongitude) = TRUE
 

 The dataset's 27544 records were derived from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004357-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k43d9y
title: Occurrence Download

description: A dataset containing 153233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lobodon",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 153233 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004330-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mrzecu
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Creagrutus pearsoni",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 13 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004370-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p5zwjt
title: Occurrence Download

description: A dataset containing 1335 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dillenia indica",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 1335 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004371-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18446786
title: Code and processed data for "Characteristics of Antarctic Bottom Water in WOA, ocean ensemble reanalysis, and CMIP6 models"

description: This dataset includes pre-processed products derived from the World Ocean Atlas 2023 (WOA23), the GLOBAL-MULTIYEAR-PHY-ENS-001-031 ensemble reanalysis, and selected CMIP6 models. These data support the analysis of AABW properties as discussed in the article titled "Characteristics of Antarctic Bottom Water in WOA, ocean ensemble reanalysis, and CMIP6 models". The accompanying code provides a comprehensive workflow for data visualization and the generation of all manuscript figures.
DOI: 10.5281/zenodo.18446787
title: Code and processed data for "Characteristics of Antarctic Bottom Water in WOA, ocean ensemble reanalysis, and CMIP6 models"

description: This dataset includes pre-processed products derived from the World Ocean Atlas 2023 (WOA23), the GLOBAL-MULTIYEAR-PHY-ENS-001-031 ensemble reanalysis, and selected CMIP6 models. These data support the analysis of AABW properties as discussed in the article titled "Characteristics of Antarctic Bottom Water in WOA, ocean ensemble reanalysis, and CMIP6 models". The accompanying code provides a comprehensive workflow for data visualization and the generation of all manuscript figures.
DOI: 10.15468/dl.2qvj4j
title: Occurrence Download

description: A dataset containing 4185 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ficus citrifolia",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 4185 records from 223 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004374-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31302694
title: multi-dimension exponent approximation

description: This repository contains the data and code used to study space-time clustering in large crime datasets using self-exciting point process models. We propose a multi-dimensional Gaussian-type exponent approximation that improves computational efficiency and allows flexible estimation of the conditional intensity function. The method is evaluated through simulations and applied to burglary data from Chicago, where strong space-time clustering patterns are observed. The provided materials support reproducible analysis and can be adapted to other large-scale spatiotemporal event datasets.
DOI: 10.6084/m9.figshare.31302694.v1
title: multi-dimension exponent approximation

description: This repository contains the data and code used to study space-time clustering in large crime datasets using self-exciting point process models. We propose a multi-dimensional Gaussian-type exponent approximation that improves computational efficiency and allows flexible estimation of the conditional intensity function. The method is evaluated through simulations and applied to burglary data from Chicago, where strong space-time clustering patterns are observed. The provided materials support reproducible analysis and can be adapted to other large-scale spatiotemporal event datasets.
DOI: 10.6084/m9.figshare.29232266
title: <b>Chromosome-level genome and organ-specific transcriptome of</b><b> </b><b><i>Alnus glutinosa</i></b><b> uncover lineage-specific innovations in root nodule symbiosis</b>

description: <i>Alnus glutinosa</i><i> </i>is one of only three lineages within the order Fagales capable of establishing root nodule symbiosis (RNS). Although a fragmented genome assembly of <i>A. glutinosa</i><i> </i>was previously available, its limited quality, combined with the lack of comprehensive transcriptomic resources has constrained in-depth comparative and functional genomic analyses. In this study, we present a 505Mb chromosome-level genome assembly of <i>A. glutinosa</i><i>,</i> anchored to 14 pseudochromosomes, representing the most complete and high-quality genomic resource for this species to date. Whole-genome alignment and synonymous substitution rate (Ks) analysis confirm Alnus and Betula as sister genera with shared genomic architectures and evolutionary histories. Functional enrichment analyses of nodule-enhanced genes reveal significant associations with photosynthesis and sugar metabolism, while expanded gene families are enriched in terpenoid biosynthesis and malate transport pathways, likely critical to RNS in <i>A. glutinosa</i>. Phylogenetic analysis indicated that Alnus has retained non-symbiotic class 1 hemoglobin (nsHB1), but lost non-symbiotic class 2 hemoglobin (nsHB2), suggesting a lineage-specific adaptation in symbiotic oxygen regulation. Further comparative analysis of nsHB1 protein sequences across nodulating taxa highlights evolutionary patterns within the Alnus lineage. Through a targeted phylogenetic survey of known RNS-related genes, we identified presence-absence variation (PAV) in RPG and copy number variation (CNV) in AGO5, both of which may underlie Alnus-specific RNS adaptations. Weighted gene co-expression network analysis (WGCNA) identified a nodule-specific module (NSM) comprising 231 genes significantly enriched in sugar-related metabolic pathways. Notably, the bZIP ortholog shows conserved nodule-specific expression across species from Cucurbitales, Rosales, and Fabales, suggesting deep evolutionary conservation of within the nitrogen-fixing clade. Together, these findings provide a high-resolution view of Alnus-specific RNS adaptations and uncover conserved regulatory modules potentially critical for RNS.
DOI: 10.6084/m9.figshare.29232266.v1
title: <b>Chromosome-level genome and organ-specific transcriptome of</b><b> </b><b><i>Alnus glutinosa</i></b><b> uncover lineage-specific innovations in root nodule symbiosis</b>

description: <i>Alnus glutinosa</i><i> </i>is one of only three lineages within the order Fagales capable of establishing root nodule symbiosis (RNS). Although a fragmented genome assembly of <i>A. glutinosa</i><i> </i>was previously available, its limited quality, combined with the lack of comprehensive transcriptomic resources has constrained in-depth comparative and functional genomic analyses. In this study, we present a 505Mb chromosome-level genome assembly of <i>A. glutinosa</i><i>,</i> anchored to 14 pseudochromosomes, representing the most complete and high-quality genomic resource for this species to date. Whole-genome alignment and synonymous substitution rate (Ks) analysis confirm Alnus and Betula as sister genera with shared genomic architectures and evolutionary histories. Functional enrichment analyses of nodule-enhanced genes reveal significant associations with photosynthesis and sugar metabolism, while expanded gene families are enriched in terpenoid biosynthesis and malate transport pathways, likely critical to RNS in <i>A. glutinosa</i>. Phylogenetic analysis indicated that Alnus has retained non-symbiotic class 1 hemoglobin (nsHB1), but lost non-symbiotic class 2 hemoglobin (nsHB2), suggesting a lineage-specific adaptation in symbiotic oxygen regulation. Further comparative analysis of nsHB1 protein sequences across nodulating taxa highlights evolutionary patterns within the Alnus lineage. Through a targeted phylogenetic survey of known RNS-related genes, we identified presence-absence variation (PAV) in RPG and copy number variation (CNV) in AGO5, both of which may underlie Alnus-specific RNS adaptations. Weighted gene co-expression network analysis (WGCNA) identified a nodule-specific module (NSM) comprising 231 genes significantly enriched in sugar-related metabolic pathways. Notably, the bZIP ortholog shows conserved nodule-specific expression across species from Cucurbitales, Rosales, and Fabales, suggesting deep evolutionary conservation of within the nitrogen-fixing clade. Together, these findings provide a high-resolution view of Alnus-specific RNS adaptations and uncover conserved regulatory modules potentially critical for RNS.
DOI: 10.15468/dl.k28shp
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Creagrutus peruanus",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 27 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004378-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.