cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.huw7ng
title: Occurrence Download

description: A dataset containing 3562 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna macranthera",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3562 records from 156 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022828-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mk5853
title: Occurrence Download

description: A dataset containing 160 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Raphanus sativus",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 160 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022829-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kg8w6u
title: Occurrence Download

description: A dataset containing 14155 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spathodea campanulata"
 ]
}

 The dataset includes 14155 records from 491 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022832-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6p9wmt
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna sophera",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022831-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dzxs5j
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna sophera",
 "Country is Comoros",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022833-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s6kaap
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna sophera",
 "Country is Equatorial Guinea",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022834-250920141307145/datasets/export for details.
DOI: 10.15468/dl.j7k4ec
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rorippa cantoniensis",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 82 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022835-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2fpv5z
title: Occurrence Download

description: A dataset containing 12957 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tamarix ramosissima"
 ]
}

 The dataset includes 12957 records from 345 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022836-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5286/isis.e.rb2510392-2
title: Engineering magnetoelectric coupling in 4H-SrMnO3 through chemical pressure

description: New multiferroic materials are sought to enable transformative next-generation technologies such as ultralow-power memory devices. Magnetoelectric (ME) coupling between ferromagnetic (FM) and ferroelectric (FE) orderings provides the key functionality in this pursuit, but it is difficult to engineer these into a single material due to their competing chemical requirements. We recently developed a symmetry-based approach to design ME coupling in perovskite materials, and now we seek to showcase its wider utility in more complex structure types. 4H-SrMnO3 exhibits several structural and magnetic instabilities which render it amenable to our ME coupling scheme, but the octahedral tilts in this system must be reoriented to induce an improper FE mode – this represents the final symmetry-breaking ingredient required to induce ME coupling. We seek to perform a variable-temperature neutron diffraction experiment on GEM on the series 4H-Sr1-xCaxMnO3 to assess whether chemical pressure effects unlock the FE mode in this system, thus providing the critical symmetry-required ingredients for ME coupling. Our results will highlight the potential of hexagonal perovskite polytypes to demonstrate technologically useful ferroic behaviours, hence illustrating the generality of our symmetry approach to realise new ME multiferroics for next-generation device applications.
DOI: 10.5286/isis.e.rb2510392
title: Engineering magnetoelectric coupling in 4H-SrMnO3 through chemical pressure

description: New multiferroic materials are sought to enable transformative next-generation technologies such as ultralow-power memory devices. Magnetoelectric (ME) coupling between ferromagnetic (FM) and ferroelectric (FE) orderings provides the key functionality in this pursuit, but it is difficult to engineer these into a single material due to their competing chemical requirements. We recently developed a symmetry-based approach to design ME coupling in perovskite materials, and now we seek to showcase its wider utility in more complex structure types. 4H-SrMnO3 exhibits several structural and magnetic instabilities which render it amenable to our ME coupling scheme, but the octahedral tilts in this system must be reoriented to induce an improper FE mode – this represents the final symmetry-breaking ingredient required to induce ME coupling. We seek to perform a variable-temperature neutron diffraction experiment on GEM on the series 4H-Sr1-xCaxMnO3 to assess whether chemical pressure effects unlock the FE mode in this system, thus providing the critical symmetry-required ingredients for ME coupling. Our results will highlight the potential of hexagonal perovskite polytypes to demonstrate technologically useful ferroic behaviours, hence illustrating the generality of our symmetry approach to realise new ME multiferroics for next-generation device applications.
DOI: 10.5281/zenodo.17189843
title: AppleflowersData

description:    To support a comprehensive analysis of apple flower blooming stages, we independently constructed a dedicated dataset encompassing key developmental phases, including florets, early bloom, full bloom, and wilting.  Each sample was captured under diverse lighting and environmental conditions to enhance variability and robustness.  This dataset enables detailed investigation of physiological transitions in apple flowers, with a particular focus on the correlation between anther color changes, floral morphology, and blooming stage.  It provides a solid foundation for the development and validation of models for accurate stage specific flower detection.

   The dataset is collected from Yuezhuang Town, Yiyuan County, Shandong Province, China (coordinates: 118°29'N, 36°23'E).  Images are taken using a HUAWEI Nova7 smartphone in JPG format, with natural elements such as soil, sky, and apple trees in the background.  To increase the diversity of the dataset, photos are captured from late April to early May 2024, spanning full days from 6:00 a.m. to 10:00 p.m., and this process is repeated across multiple cycles.  The data collection includes alternating between day and night sessions, with a variety of lighting conditions, such as downlight and backlight.  Different shooting distances, angles, and natural conditions (sunny, cloudy, foggy, rainy, and post-rainy) are also incorporated.

   This dataset contains 1000 images and 1000 corresponding annotation files. The images are in .jpg format, and the annotations are provided in .xml format, which can be opened with the LabelImg tool.The annotation criterion is based primarily on anther color:





Flowers with dark brown or orange anthers are labeled as mature, corresponding to the late flowering stage, i.e., the full bloom and post-bloom phases of apple flowers.




Flowers that are unopened, or open but with un-dehisced pale-yellow anthers, are labeled as immature, corresponding to the early flowering stage, i.e., the dormant, bud swelling, green tip, tight cluster, pink, and balloon stages.




For transitional cases, the initial appearance of orange in the anthers is taken as the criterion for mature, in order to emphasize the practical value of pollination period recognition. Notably, such flowers, positioned between the end of the balloon stage and the onset of full bloom, also represent the critical timing for artificial anther collection. While this definition may slightly advance the classification of full bloom, it aligns with practical agricultural needs, where pollination is preferably identified earlier rather than later.



   Our dataset encompasses multiple flowering stages of apple blossoms. We encourage researchers to fully explore its potential and to extend its applications in various directions, such as king flower detection and phenological stage recognition of apple flowers.
DOI: 10.5281/zenodo.17213622
title: AppleflowersData

description:    To support a comprehensive analysis of apple flower blooming stages, we independently constructed a dedicated dataset encompassing key developmental phases, including florets, early bloom, full bloom, and wilting.  Each sample was captured under diverse lighting and environmental conditions to enhance variability and robustness.  This dataset enables detailed investigation of physiological transitions in apple flowers, with a particular focus on the correlation between anther color changes, floral morphology, and blooming stage.  It provides a solid foundation for the development and validation of models for accurate stage specific flower detection.

   The dataset is collected from Yuezhuang Town, Yiyuan County, Shandong Province, China (coordinates: 118°29'N, 36°23'E).  Images are taken using a HUAWEI Nova7 smartphone in JPG format, with natural elements such as soil, sky, and apple trees in the background.  To increase the diversity of the dataset, photos are captured from late April to early May 2024, spanning full days from 6:00 a.m. to 10:00 p.m., and this process is repeated across multiple cycles.  The data collection includes alternating between day and night sessions, with a variety of lighting conditions, such as downlight and backlight.  Different shooting distances, angles, and natural conditions (sunny, cloudy, foggy, rainy, and post-rainy) are also incorporated.

   This dataset contains 1000 images and 1000 corresponding annotation files. The images are in .jpg format, and the annotations are provided in .xml format, which can be opened with the LabelImg tool.The annotation criterion is based primarily on anther color:





Flowers with dark brown or orange anthers are labeled as mature, corresponding to the late flowering stage, i.e., the full bloom and post-bloom phases of apple flowers.




Flowers that are unopened, or open but with un-dehisced pale-yellow anthers, are labeled as immature, corresponding to the early flowering stage, i.e., the dormant, bud swelling, green tip, tight cluster, pink, and balloon stages.




For transitional cases, the initial appearance of orange in the anthers is taken as the criterion for mature, in order to emphasize the practical value of pollination period recognition. Notably, such flowers, positioned between the end of the balloon stage and the onset of full bloom, also represent the critical timing for artificial anther collection. While this definition may slightly advance the classification of full bloom, it aligns with practical agricultural needs, where pollination is preferably identified earlier rather than later.



   Our dataset encompasses multiple flowering stages of apple blossoms. We encourage researchers to fully explore its potential and to extend its applications in various directions, such as king flower detection and phenological stage recognition of apple flowers.
DOI: 10.15468/dl.shyhu7
title: Occurrence Download

description: A dataset containing 2160 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aneides aeneus"
 ]
}

 The dataset includes 2160 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022837-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.23979.71206
title: Budai Arboretum entrance
DOI: 10.15468/dl.gdyeq4
title: Occurrence Download

description: A dataset containing 28089 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spartina anglica"
 ]
}

 The dataset includes 28089 records from 172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022839-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.av7dyw
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna sophera",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 31 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022841-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p9ydm8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna sophera",
 "Country is Micronesia (Federated States of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022840-250920141307145/datasets/export for details.
DOI: 10.15468/dl.phsn3v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna sophera",
 "Country is Iraq",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022843-250920141307145/datasets/export for details.
DOI: 10.15468/dl.g747u3
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rorippa dubia",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 130 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022842-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q7n53u
title: Occurrence Download

description: A dataset containing 27245 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pueraria montana"
 ]
}

 The dataset includes 27245 records from 454 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022844-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26589834
title: Additional file 4 of Disruption of fish gut microbiota composition and holobiont’s metabolome during a simulated Microcystis aeruginosa (Cyanobacteria) bloom

description: Additional file 4: Dataset S3. Annotations of metabolites from the Microcystis aeruginosa strain PMC 728.11.
DOI: 10.6084/m9.figshare.26589840
title: Additional file 6 of Disruption of fish gut microbiota composition and holobiont’s metabolome during a simulated Microcystis aeruginosa (Cyanobacteria) bloom

description: Additional file 6: Dataset S5. Annotations of the most correlated metabolites with bacteria from fish guts at day 28.
DOI: 10.6084/m9.figshare.26589837
title: Additional file 5 of Disruption of fish gut microbiota composition and holobiont’s metabolome during a simulated Microcystis aeruginosa (Cyanobacteria) bloom

description: Additional file 5: Dataset S4. 16S rRNA gene sequencing and quality filtered read counts, SRA database accession numbers, and measures of alpha-diversity metrics (species richness, Shannon, evenness).
DOI: 10.15468/dl.chxukm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((143.815021 -36.663201, 143.815021 -36.665446, 143.819513 -36.665446, 143.819513 -36.663201, 143.815021 -36.663201))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065864-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26589831
title: Additional file 3 of Disruption of fish gut microbiota composition and holobiont’s metabolome during a simulated Microcystis aeruginosa (Cyanobacteria) bloom

description: Additional file 3: Dataset S2. Monitoring of abiotic and biotic parameters during the experiment.
DOI: 10.6084/m9.figshare.26589837.v1
title: Additional file 5 of Disruption of fish gut microbiota composition and holobiont’s metabolome during a simulated Microcystis aeruginosa (Cyanobacteria) bloom

description: Additional file 5: Dataset S4. 16S rRNA gene sequencing and quality filtered read counts, SRA database accession numbers, and measures of alpha-diversity metrics (species richness, Shannon, evenness).
DOI: 10.15468/dl.453tzf
title: Occurrence Download

description: A dataset containing 329 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (CHN.4_1, TWN.1_1)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aix galericulata (Linnaeus, 1758)"
 ]
}

 The dataset includes 329 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065865-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6r7pjr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.335195 -32.304105, 149.335195 -32.308596, 149.341933 -32.308596, 149.341933 -32.306351, 149.339687 -32.306351, 149.339687 -32.304105, 149.335195 -32.304105))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065866-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26590065
title: Additional file 1 of Dissemination of Neisseria gonorrhoeae with decreased susceptibility to extended-spectrum cephalosporins in Southern China, 2021: a genome-wide surveillance from 20 cities

description: Additional file 1: Table S1.
DOI: 10.17632/yh9kwncryg.1
title: Manuscript data set

description: Our thesis data set
DOI: 10.6084/m9.figshare.26590041
title: Additional file 2 of Celloscope: a probabilistic model for marker-gene-driven cell type deconvolution in spatial transcriptomics data

description: Additional file 2: Table S1. Marker genes for the mouse brain dataset.
DOI: 10.6084/m9.figshare.26589750.v1
title: Additional file 1 of A systematic review of biologically-informed deep learning models for cancer: fundamental trends for encoding and interpreting oncology data

description: Additional file 1: Strategies of domain knowledge integration and explainability methodsLegends: Types of omic data: G - genomics, P - proteomics, T - transcriptomics, E - epigenomics; GO - GeneOntology; PPI - protein-protein interaction; WGCNA - Weighted Correlation Network Analysis; Deep Learningarchitecture: AE - autoencoder, ANN - Artificial Neural Networks, CNN - Convolutional Neural Network, DAE -Denoising Autoencoder, DBN - Deep Belief Network, DNN - Deep Neural Network, GCNN - graph convolutionalneural network, GCNN-MLP - GCNN multilayer perceptron, MMD-VAE - Maximum Mean Discrepancy VariationalAutoencoder, VAE - Variational Autoencoder, VCDN - View Correlation Discovery Network; Interpretability method:LRP - layer-wise relevance propagation; Interpretability group: II - intrinsically interpretable, PH - post-hoc; Interpretability group: PROC - Processing; REPR - Representation; CREATE -Explanation producing; NA - not applicable.
DOI: 10.6084/m9.figshare.26565123.v1
title: Additional file 1 of Identification of ferroptosis related markers by integrated bioinformatics analysis and In vitro model experiments in rheumatoid arthritis

description: Additional file 1: Driver in ferroptosis-related genes.
DOI: 10.6084/m9.figshare.26648520
title: Additional file 2 of Gravity models for potential spatial healthcare access measurement: a systematic methodological review

description: Additional file 2. Supporting data: Application studies.
DOI: 10.6084/m9.figshare.26648520.v1
title: Additional file 2 of Gravity models for potential spatial healthcare access measurement: a systematic methodological review

description: Additional file 2. Supporting data: Application studies.
DOI: 10.17632/72vc528mwg.1
title: The role of sleep quality in the association between hypocretin-1 and depression in elderly patients with acute ischemic stroke

description: This study aims to evaluate the possible association between Hcrt-1 and post-stroke depression (PSD) in elderly patients with acute ischemic stroke, and whether post-stroke sleep quality mediated such links. A self-report questionnaire was administered to elderly individuals with acute ischemic stroke. Cerebrospinal fluid (CSF) samples were taken to assess the levels of Hcrt-1 at admission. A bootstrapping approach was performed to explore the relationship between Hcrt-1 and PSD. The mediator was considered significant if the 95% confidence interval (CI) did not include 0. The prevalence of PSD and poor post-stroke sleep quality was 38.73% and 42.16% among elderly patients. The levels of CSF Hcrt-1 were significantly lower in patients with PSD and poor post-stroke sleep quality. Meanwhile, there were significant correlations among Hcrt-1, post-stroke sleep quality, and PSD (P &lt;0.01). Mediation analysis identified post-stroke sleep quality as medicator in the association between Hcrt-1 and PSD. The influence of CSF Hcrt-1 on PSD was mediated by post-stroke sleep quality, which accounted for 32.25%. Post-stroke quality of sleep might partially mediate the association of cerebrospinal fluid levels of Hcrt-1 with PSD. These results highlight the biological and behavioral mechanisms potentially linking Hcrt-1 to PSD.