cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.rh67h/2
title: 14C_dating_charcoals_colluvial_deposits_pollen_Germany

description: AMS-14C dating of charcoals sampled from colluvial deposits and of bog peat.
DOI: 10.5061/dryad.rh67h/3
title: Soil_profile_descriptions_colluvial_soils_Germany

description: Archaeopedological analyses of colluvium: A proxy for regional land use history in southwest Germany.
DOI: 10.5061/dryad.rh67h/4
title: OSL_datings_colluvial_deposits_Germany

description: OSL datings of colluvial deposits in southwestern Germany
DOI: 10.5061/dryad.t8c88vh/1
title: Data Model1

description: Data for Models 1-1 and 1-2
DOI: 10.5061/dryad.vb06d3k/2
title: Dataset with the whole foraging sequence (multiple values per bumblebee)

description: The whole foraging sequence of bumblebees exposed to 1 ppb imidacloprid in sugar solution and none in pollen. Rawdata was collected via a robotic flower system (Kuusela & Lämsä 2016) and was collapsed into a CSV file to allow easy import to statistical software, such as R. The dataset can be used to analyse i.e. difference in learning rates.
DOI: 10.5061/dryad.vb06d3k/3
title: spectra

description: Relative spectral reflectance of used colours (maximum reflectance = 1, maximum illumination = 1). nm = wavelenght, hue30=orange, used only in the nest cage, hue35=used both in flight arena and nest cage (quinine in the flight arena, the difficult learning task), hue43=yellow, used both in flight arena and nest cage (sugar solution in the flight arena, the rewarding flower), flightarenablue=used both in flight arena and nest cage (quinine in the flight arena, the easy learning task), nestcageblue= blue, used only in the nest cage, floor=floor reflectance, illumination=illumination spectra, relative values (highest value=1).
DOI: 10.5061/dryad.vq349kt/1
title: Mantel test diagram of unbiased Nei’s genetic distance (uGD) versus geographic distance (km), for testing isolation-by-distance
DOI: 10.5061/dryad.1nc461g/1
title: cattle selectivity database
DOI: 10.5061/dryad.1ts48/2
title: Fig 8. Taxonomy Summary
DOI: 10.5061/dryad.29254rn/1
title: PRISMA checklist appendix 1
DOI: 10.5061/dryad.29254rn/2
title: search strategy appendix 2
DOI: 10.5061/dryad.29254rn/3
title: piloted forms appendix 3
DOI: 10.5061/dryad.29254rn/4
title: Risk of bias assessment appendix 4
DOI: 10.5061/dryad.29254rn/5
title: Supplementary tables

description: Supplementary table 1: Correlation of qEEG and cognition; Supplementary table 2: Longitudinal assessments; Supplementary table 3: Motor function; Supplementary table 4: Treatment; Supplementary table 5: Other
DOI: 10.5061/dryad.425c941/1
title: Daily recordings from all nests

description: See ReadMe for details on all included data, and see Publication and supplementary methods for definitions.
DOI: 10.5061/dryad.425c941/2
title: Overview data per clutch

description: Single entry per nest containing overall information. For details see Publication and Supplements, and the ReadMe file.
DOI: 10.5061/dryad.425c941/3
title: Effects of herbs on mean offspring development

description: See ReadMe for all variable names, and Publication and Supplements for further information.
DOI: 10.5061/dryad.45dc7qj/1
title: Full dataset

description: We developed a new community-wide scan (CWS) approach to identify species that are potential key contributor to a given ecosystem service. Here we apply this framework to define the "key fish species" for fish biomass and live coral cover.
DOI: 10.5061/dryad.53m6f5n/2
title: Rubin et al. - phylogenomic and morphometric data files

description: Phylogenomic and morphometric data sets and coding scripts
DOI: 10.5061/dryad.56ck582/1
title: Raw data and environmental data

description: Raw data for developmental and hardening CTMAX and viability in ten Drosophila species. Means for estimates of plasticity and environment.
DOI: 10.5061/dryad.5726103/1
title: row data used for all analyses

description: genotype data in ped file format used in "The demographic history of Atlantic Salmon (Salmo salar) across its distribution range reconstructed from Approximate Bayesian Computations, Rougemont, Quentin, Bernatchez, Louis"
DOI: 10.5061/dryad.59q56g6/1
title: marker position Pundamilia linkage map

description: Text file giving the position of 1,597 loci on the Pundamilia linkage map and the respective positions on Pundamilia and Oreochromis references
DOI: 10.5061/dryad.88n4d54/1
title: Fig3
DOI: 10.5061/dryad.88n4d54/2
title: Fig4
DOI: 10.5061/dryad.88n4d54/3
title: Fig5
DOI: 10.5061/dryad.88n4d54/4
title: Fig6
DOI: 10.5061/dryad.88n4d54/5
title: Fig7
DOI: 10.5061/dryad.88n4d54/6
title: Fig8
DOI: 10.5061/dryad.88n4d54/7
title: Readme
DOI: 10.5061/dryad.c710g76/1
title: Fine-root traits in tropical old-growth and logged-over forests

description: This data file contains mean fine-root (&lt; 2 mm in diameter) biomass, architectural and morphological traits measured in a tropical old-growth forest, and in a 54-year-old logged-over forest in Ghana.
DOI: 10.5061/dryad.cs41886/1
title: Paudel et al 2018_Reproductive isolation_evolution_Dyrad

description: All data collected through field experiment.
DOI: 10.5061/dryad.ds543.1/2.1
title: Character List

description: A character list to accompany the character-taxon matrix
DOI: 10.5061/dryad.ds543.1/3.1
title: Raven&MaidmentOSI

description: A file containing characters, justifications for changes made to characters, and synapomorphies
DOI: 10.5061/dryad.g0g5tv8/1
title: Table S3_The total information of Full
DOI: 10.5061/dryad.g0g5tv8/2
title: Table S4_The total statistics of Full
DOI: 10.5061/dryad.g0g5tv8/3
title: Table S5_Fasta_The assembling results of Full
DOI: 10.5061/dryad.g0g5tv8/4
title: Table S6_Fasta_GenBank Accession and Clone Id of Full
DOI: 10.5061/dryad.gk76q/1
title: Chen_et al_Supplmentary_meta_data

description: Data of tree growth, tree size, species, neighborhood crowding index, neighborhood dissimilarity, species abundance and species shade tolerance index
DOI: 10.5061/dryad.hm63867/1
title: BransDeMeester_FE_data_UrbanizationPaceOfLife

description: Data include life history data and physiological data reported in Brans et al., 2018, Functional Ecology (City life on fast lanes: urbanization induces an evolutionary shift towards a faster life style in the water flea Daphnia), as wel as Brans et al., 2018, Proceedings B (Urbanization drives genetic differentiation in physiology and structures the evolution of pace-of-life syndromes in the water flea Daphnia magna).
DOI: 10.5061/dryad.hq3vq/1
title: tree_processing

description: This zip-archive contains all steps that were executed post tree inference, including the extraction and plotting of node-height distributions, the generation of similarity matrices and the calculation of the maximum clade credibility trees for all MSC analyses.
DOI: 10.5061/dryad.jn33140/1
title: Data originally from Eisenmann

description: Daily running totals of mice w access to running wheels. Data originally collected by Garland lab for Eisenmann, J. C., E. E. Wickel, S. A. Kelly, K. M. Middleton, and T. Garland. 2009. Day-to-day variability in voluntary wheel running among genetically differentiated lines of mice that vary in activity level. European Journal of Applied Physiology 106:613-619. https://doi.org/10.1007/s00421-009-1056-z
DOI: 10.5061/dryad.m0ks82k/1
title: Wooliver et al. 2018 greenhouse data

description: Individual plant height (in centimeters), total biomass (in grams), and number of roots colonized by ectomycorrhizal (ECM), arbuscular mycorrhizal (AM), dark septate endophytic (DSE), and non-filamentous fungi out of 50 fields of view. Individuals include 15 Tasmanian Eucalyptus species within the subgenus Symphyomyrtus that comprise two phylogenetic lineages: the alpine white, black, and yellow gums (lienage 1) and the white and blue gums (lineage 2). Individuals were arranged in a randomized block design and received factorial treatments of low vs. high nitrogen enrichment, fungicide vs. live soils, and four soil inocula (control potting mix, soils conditioned by conspecific trees, soils conditioned by trees within the same lineage, and soils conditioned by trees within the opposite lineage).
DOI: 10.5061/dryad.m0ks82k/2
title: Wooliver et al. 2018 fungal sequencing data

description: Relative abundances and fungal guilds of fungal OTUs identified in conspecific soil inocula used in the Wooliver et al. 2018 greenhouse experiment. Soils were harvested from trees of 16 Eucalyptus species growing in two Tasmanian common gardens and pooled at the species level, then sequenced for fungal DNA using next-generation sequencing.
DOI: 10.5061/dryad.m7n150f/1
title: Full data set

description: Full dataset used in the analyses

column #1: total mass of focal seeds (of paternal genotype i) on a given ear 
column #2: number of focal seeds (of paternal genotype i) on a given ear (ajusted for missing seeds)
column #3: number of competitor seeds (of paternal genotype j) on the same ear (ajusted for missing seeds)
column #4: identity of focal paternal genotype i (codes for strains given below)
column #5: identity of competitor paternal genotype j (codes for strains given below)
column #6: identity of maternal genotype 

codes for genotypes: 1=A619, 2= B1-Peru, 3= Mo17, 4=B73, 5= W22, 6=W23
DOI: 10.5061/dryad.mr0rg45.1
title: Data from: Diel predator activity drives a dynamic landscape of fear
DOI: 10.5061/dryad.mr0rg45.2
title: Data from: Diel predator activity drives a dynamic landscape of fear
DOI: 10.5061/dryad.mr0rg45.2/1.2
title: Kohl_etal_NorthernRangeCowElkData_2001thru2004

description: This is GPS data collected by Dr. Mark Boyce and National Park Staff as part of the early monitoring efforts of elk following wolf reintroduction.  Winter data (see paper for information) is cleaned and operational. Migration data and Summer is not.  Fix intervals vary by individual so please contact Dan MacNulty at Utah State University for additional information pertaining to these schedules and any other pertinent information.  These data were assembled from three different sources (Mao, Varley, Evans), so duplicated records may exists for some records.
DOI: 10.5061/dryad.mr0rg45.2/2.2
title: Final Analysis Dataset for Matched-Case Control Elk Habitat Selection
DOI: 10.5061/dryad.mr0rg45.2/3.2
title: Summary information for Historic Northern Yellowstone Elk Data
DOI: 10.5061/dryad.mr0rg45.2/4.2
title: Diel activity of wolves
DOI: 10.5061/dryad.q870sr8/1
title: Data from Gray et al. Behavioural Ecology

description: Data from Gray, Richardson, Ratz & Smiseth - No evidence for parent-offspring competition in the burying beetle Nicrophorus vespilloides. See ReadMe for more details.
DOI: 10.5061/dryad.s3b66h9/1
title: The molecular detection and identification of facultative endosymbionts and parasitoids in field collected Sitobion avenae

description: The molecular detection and identification of facultative endosymbionts and parasitoids in field collected Sitobion avenae. Positive and negative detections are represented as “1” and “0”, respectively. Spaces are replaced using “_”.
DOI: 10.5061/dryad.t8c88vh/2
title: Data Model2

description: Data for Models 2-1 and 2-2
DOI: 10.5061/dryad.t8c88vh/3
title: Script Model 1 and 2

description: Scripts necessary to analyse Models 1 and 2
DOI: 10.5061/dryad.vq349kt/2
title: ISSR patterns of Ramonda serbica
DOI: 10.5061/dryad.2459s12/1
title: Supplementary Materials

description: Original aerial UAS-based and synthetics imagery data used for the  comparison of photogrammetric  algorithms
DOI: 10.5061/dryad.2r7f832/1
title: Supp
DOI: 10.5061/dryad.32b87rn/1
title: Directory with cluster size measurments

description: Data from reversibility experiment and R code to analyze data and make figure 5.
DOI: 10.5061/dryad.32b87rn/2
title: FitnessCosts

description: Directory with data and R code to make figure 2. (Competition assays). README file (biomass) contains metadata for all the files.
DOI: 10.5061/dryad.32b87rn/3
title: Growth

description: R code and data from growth curves and BSA standards. For figures 1 and A2 and estimating the growth parameters used in the spatial simulations.
DOI: 10.5061/dryad.372sq/1
title: Data files and notebook for HyDe

description: This is a zipped folder containing all of the simulated data and the output files for our analyses using HyDe. The Jupyter Notebook (HyDe_SysBio.ipynb) that is included has code to analyze all of the data.
DOI: 10.5061/dryad.372sq/2
title: Jupyter notebook for analyses with HyDe

description: This repository has the Jupyter notebook for simulating, processing, and analyzing all data sets used for the description of. Code for the simulations, as well as code for processing results, are all part of the notebook.
DOI: 10.5061/dryad.3cm38jd/1
title: dataAmNatBerger

description: Dataset including demographic, environmental and social information in dominant Alpine marmots. Each line contains information on a dominant: the sex (sex), the birth (BirthExpo) and adult territory sun exposure (AdExpo), the number of helpers at birth (BirthHelper), the presence of helpers during adult life (AdHelper), censoring variable (censor) and the last age at which the dominant was seen and or captured (LastAgeSeen)
DOI: 10.5061/dryad.4f99c46/1
title: SoundFile

description: Sound files (number of channels = 1; data length = 10 seconds) of echolocation pulses recorded with microphones mounted directly on bats flying alone or in groups of four individuals. The data were digitized using a high-speed data-acquisition card (National Instruments, Model NI PXI-6358, Tokyo, Japan, 16 bit, fs = 500 kHz). File names are as below. "batID"_"flight condition".bin
DOI: 10.5061/dryad.59kr65r/1
title: Hautier_Disturbance_Zurich

description: Mono08: Monoculture biomass and light interception, June08: Mixtures biomas, pHNitrogen08: pH and nitrogen, Prediction08: Biomass and light ratio
DOI: 10.5061/dryad.59q56g6/2
title: chain file converting P_nyererei_v1 to v2

description: Chain files to convert position between original (v1.0) and new reference (v2.0) of Pundamilia
DOI: 10.5061/dryad.59q56g6/3
title: chain file converting P_nyererei_v2 to v1

description: Chain files to convert position between new reference (v2.0) and original (v1.0) of Pundamilia
DOI: 10.5061/dryad.59q56g6/4
title: P_nyererei_v2 annotation

description: Annotation file matching reference v2.0 position based on NCBI annotation release 101
DOI: 10.5061/dryad.59q56g6/5
title: recombination rates Pundamilia

description: Text file giving the extrapolated recombination rates along Pundamilia reference genome
DOI: 10.5061/dryad.59q56g6/6
title: genotype file Pundamilia

description: vcf file containing 7401 genotypes of 224 Pundamilia individuals
DOI: 10.5061/dryad.59q56g6/7
title: phenotypes for Pundamilia cross

description: phenotypes for 224 Pundamilia individuals containing id, sex, size, and family id
DOI: 10.5061/dryad.59q56g6/8
title: P_nyererei reference v2

description: Fasta file of the improved Pundamilia reference genome (v2.0)
DOI: 10.5061/dryad.8jm70/1
title: Suppl data_Dick and Wakeling OpenSci geometric models

description: data contains two spreadsheets with individual subject muscle parameters as compared to model predictions and means with standard errors for 3 models
DOI: 10.5061/dryad.8kv2b20/1
title: programs and test data

description: Programs Preston.R and Indices.R, mentioned in supplementary material of the paper, to calculate the Preston parameters and then indices from that output. The zip file also contains test data and brief user guides for each program.
DOI: 10.5061/dryad.8kv2b20/2
title: Supplementary-Material2.html 3d-plot

description: dynamic 3d-plot illustrating the three indices Pointedness, Elongation and Polar Asymmetry for three species (Uria aalge, Uria lomvia, Alca torda)
DOI: 10.5061/dryad.8kv2b20/3
title: Data and Analysis

description: Contains the R script (Analysis.R) which computes everything in the article, and the data sets used. Also contains the Rmarkdown file (Supplementary-Material2.Rmd) which produces the 3-d plot in Supplementary-Material2.html
DOI: 10.5061/dryad.9b4g92k/1
title: Field-based and simulated datasets

description: These are all the datasets used in the simulated and field-based studies. The simulated data were obtained from M-Surge software. The field-based data have been collected from a long-term monitoring survey carried out in the black-legged kittiwake colony of Hornøya, Norway.
DOI: 10.5061/dryad.b5408s1/1
title: white_tailed_eagle_female

description: This dataset includes all breeding attempts by known age female white-tailed eagles between 3 – 26 years old and the associated information of the partner if known.
FemaleID = individual code for female identity
MaleID = individual code for male identity
OriginF = Origin of female
OriginM = Origin of male (if known)
Origin categories: R1 = release phase 1, R2 = release phase 2, W= wild bred
Territory = individual code for breeding territory
Year = year of breeding attempt
FAge = The age of the female
Mage = The age of the male (if known)
Fexp = The number of breeding year / experience of the female
Mexp = The number of breeding year / experience of the male (if known)
Success =  0/1 if any chicks were fledged or not
Fledged = 0/1/2 the number of chicks fledged
DOI: 10.5061/dryad.b5408s1/2
title: white_tailed_eagle_male

description: This dataset includes all breeding attempts by known age male white-tailed eagles between 3 – 26 years old and the associated information of the partner if known.
MaleID = individual code for male identity
FemaleID = individual code for female identity
OriginF = Origin of female (if known)
OriginM = Origin of male
Origin categories: R1 = release phase 1, R2 = release phase 2, W= wild bred
Territory = individual code for breeding territory
Year = year of breeding attempt
FAge = The age of the female (if known)
Mage = The age of the male
Fexp = The number of breeding year / experience of the female (if known)
Mexp = The number of breeding year / experience of the male
Success =  0/1 if any chicks were fledged or not
Fledged = 0/1/2 the number of chicks fledged
DOI: 10.5061/dryad.b5408s1/3
title: young_success

description: This data set includes data from female white-tailed eagles aged 3 – 15 and male white-tailed eagles aged 3 – 18 years to examine breeding success.
ID = Individual identity
Territory = individual code for breeding territory
Year = year of breeding attempt
Origin = Origin of individual
Origin categories: R1 = release phase 1, R2 = release phase 2, W= wild bred
Sex = Male / Female
First_age = age at individuals first breeding attempt
Age = age at breeding attempt
Success =  0/1 if any chicks were fledged or not
DOI: 10.5061/dryad.b5408s1/4
title: young_productivity

description: This data set includes data from female white-tailed eagles aged 3 – 13 and male white-tailed eagles aged 3 – 18 years to examine breeding productivty.
ID = Individual identity
Territory = individual code for breeding territory
Year = year of breeding attempt
Origin = Origin of individual
Origin categories: R1 = release phase 1, R2 = release phase 2, W= wild bred
Sex = Male / Female
First_age = age at individuals first breeding attempt
Age = age at breeding attempt
Fledged = 0/1/2 the number of chicks fledged
DOI: 10.5061/dryad.b5408s1/5
title: old_success

description: This data set includes data from female white-tailed eagles aged 16 – 23 and male white-tailed eagles aged 19 – 23 years to examine breeding success.
ID = Individual identity
Territory = individual code for breeding territory
Year = year of breeding attempt
Origin = Origin of individual
Origin categories: R1 = release phase 1, R2 = release phase 2, W= wild bred
Sex = Male / Female
Last_age = age at individuals last breeding attempt NB. Many were still alive and breeding while monitoring was on going. Therefore year of last recorded breeding attempt also given (Last_year).
Age = age at breeding attempt
Success =  0/1 if any chicks were fledged or not
DOI: 10.5061/dryad.b5408s1/6
title: old_productivity

description: This data set includes data from female white-tailed eagles aged 14 – 23 and male white-tailed eagles aged 19 – 23 years to examine breeding productivity.
ID = Individual identity
Territory = individual code for breeding territory
Year = year of breeding attempt
Origin = Origin of individual
Origin categories: R1 = release phase 1, R2 = release phase 2, W= wild bred
Sex = Male / Female
Last_age = age at individuals last breeding attempt NB. Many were still alive and breeding while monitoring was on going. Therefore year of last recorded breeding attempt also given (Last_year).
Age = age at breeding attempt
Fledged = 0/1/2 the number of chicks fledged
DOI: 10.5061/dryad.b5408s1/7
title: ReadMe
DOI: 10.5061/dryad.bp8jf84/1
title: Sciurus vulgaris physiological stress dataset

description: The dataset includes capture data, biometrics and FGM concentrations for Eurasian red squirrels in study sites with and without the invasive species (Eastern grey squirrel). It contains a copy of the main data file used for this paper (for details see README file).
DOI: 10.5061/dryad.cd4q0ds/1
title: Sample description with microsatellite dataset

description: Sample description (sheet 1) with microsatellite dataset (genotypes in sheet 2, allelic frequencies in sheet 3, genetic diversity estimates in sheet 3). The locality label is composed of the habitat type (M=marina, R=natural rocky reef, F=cultivated population), the bay number code, and the year of sampling as shown in Fig. 1 in the associated paper. The geographic name of each locality and bay are detailed in Table 1 of the associated paper.
DOI: 10.5061/dryad.cd4q0ds/2
title: RADseq VCF file (Undaria pinnatifida - Brittany)

description: VCF file with ddRad-seq dataset. This dataset comprises 10,615 single-SNP loci polymorphic in a sample of 735 Undaria pinnatifida sporophytes originating from 36 temporal or spatial samples. Individual codes are described in sheet 1 of the the associated microsatellite dataset (see Excell file).
DOI: 10.5061/dryad.cj262df/1
title: README

description: README File containing list of files contained in this dryad package
DOI: 10.5061/dryad.cj262df/2
title: MAYFLY_ref

description: Folder containing the reference sequences by each loci used to make the Mayfly_1 probe kit as well as used as a set of references in IBA assembly
DOI: 10.5061/dryad.cj262df/3
title: Mayfly_1_Probes

description: Mayfly_1 probe kit
DOI: 10.5061/dryad.g0g5tv8/5
title: Table S7_The total_Information of SSH-D
DOI: 10.5061/dryad.g0g5tv8/6
title: Table S8_The total_Statistic of SSH-D
DOI: 10.5061/dryad.g0g5tv8/7
title: Table S9_The total_Information of SSH-G
DOI: 10.5061/dryad.g0g5tv8/8
title: Table S10_The total_Statistic of SSH-G
DOI: 10.5061/dryad.kp25pk7/1
title: RAD_Vitis_filter_VCF

description: The filtered VCF file containing SNPs detected from four Vitis species in East Asia and Vitis vinifera using RAD-seq.
DOI: 10.5061/dryad.kr4031f/1
title: CTmax

description: Maximum critical limit data used in analyses
DOI: 10.5061/dryad.m7f8n/1
title: RSOS
DOI: 10.5061/dryad.mr0rg45.1/1.1
title: Kohl_etal_NorthernRangeCowElkData_2001thru2004

description: This is GPS data collected by Dr. Mark Boyce and National Park Staff as part of the early monitoring efforts of elk following wolf reintroduction.  Winter data (see paper for information) is cleaned and operational. Migration data and Summer is not.  Fix intervals vary by individual so please contact Dan MacNulty at Utah State University for additional information pertaining to these schedules and any other pertinent information.  These data were assembled from three different sources (Mao, Varley, Evans), so duplicated records may exists for some records.
DOI: 10.5061/dryad.n1q6527/1
title: Arenillas et al. supplementary Material
DOI: 10.5061/dryad.p3bn4fk/1
title: tb_reach_data_Plos_One
DOI: 10.5061/dryad.r4mk47p/1
title: Grassland site data used in the analyses
DOI: 10.5061/dryad.tf5p8t7/1
title: Grasshopper, spider, goldenrod, and environmental data

description: Data for organism survival, reproduction, stoichiometry, as well as temperature and soil water content data.