cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.698rpx
title: Occurrence Download

description: A dataset containing 4748 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Baiomys taylori (Thomas, 1887)",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 4748 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002404-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/504b3efff5d74b28af80dce4ce69e250
title: SBC LTER: Reef: Seasonal Kelp Forest Community Dynamics: Urchin size frequency distribution

description: These data describe the size frequency distribution of red
 (Mesocentrotus franciscanus) and purple
 (Strongylocentrotus purpuratus) sea urchins
 within permanent plots of SBCLTER's seasonal kelp forest
 monitoring program to track long-term patterns in species
 abundance and diversity. The diameter of the test (shell without
 spines) was recorded to the nearest 0.5 cm for 50 red and 50
 purple sea urchins located within a 40 m x 2 m area of each plot.
 Size frequency data of red and purple sea urchins are not
 collected in the continual kelp removal plots. When combined with
 size-mass relationships established in the laboratory these data
 were used to provide a non-destructive, in situ estimate of the
 dry mass per unit area of bottom for each species. The experiment
 was initiated in 2008 at five reef sites along the mainland coast
 of the Santa Barbara Channel.
DOI: 10.15468/dl.vt3eht
title: Occurrence Download

description: A dataset containing 7657 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-16.96457 32.89311,-17.32951 32.90824,-17.32006 32.59435,-16.52209 32.51114,-16.58638 32.82882,-16.96457 32.89311))",
 "OccurrenceStatus is Present",
 "TaxonKey is Turdus merula Linnaeus, 1758"
 ]
}

 The dataset includes 7657 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002406-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hx6fmh
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nigeria",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Loxodonta africana (Blumenbach, 1797)"
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002405-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25380/iastate.25872271
title: Data from: Spatial and temporal migratory connectivity of two sympatrically breeding wood-warblers with geographically discordant population trends

description: This dataset includes raw and processed geolocator data, spatial analysis inputs, and R code used to estimate migratory connectivity and space use across the annual cycle for Worm-eating Warblers (Helmitheros vermivorum) and Louisiana Waterthrush (Parkesia motacilla). We collected data at four breeding sites across the species’ ranges using light-level geolocators.
DOI: 10.15468/dl.7hx86k
title: Occurrence Download

description: A dataset containing 1238 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Reithrodontomys montanus (Baird, 1855)",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 1238 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002408-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5067/goes-17/ceres/geo_ed4_sh_v01.4
title: SatCORPS CERES GEO Edition 4 GOES-17 Southern Hemisphere Version 1.4
DOI: 10.34740/kaggle/dsv/11840392
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5067/noaa20/ceres/ssf1degday_l3.001c
title: CERES Time-Interpolated TOA Fluxes, Clouds and Aerosols Daily NOAA-20 Edition1C
DOI: 10.15468/dl.a3af2k
title: Occurrence Download

description: A dataset containing 56038 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aix sponsa (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Year is greater than 1989",
 "Year is less than 2026",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is Absent"
 ]
 }
 },
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 56038 records from 119 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002401-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzxhtz
title: Occurrence Download

description: A dataset containing 23321 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ara militaris"
 ]
}

 The dataset includes 23321 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007555-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8ysum
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hypostomus pospisili)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030326-250811113504898/datasets/export for details.
DOI: 10.5281/zenodo.16923563
title: POEMAS December 2020 10ms

description: Data from the POEMAS instrument for December 2020, with a temporal resolution of 10ms. This record contains daily data files in one or more formats (e.g., ZIP, FITS, CSV).
DOI: 10.15468/dl.e99ufd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Echinogammarus berilloni",
 "Country is Switzerland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030327-250811113504898/datasets/export for details.
DOI: 10.15468/dl.u87jrz
title: Occurrence Download

description: A dataset containing 215585 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((-74.42762 4.79447,-74.43804 4.78183,-74.44246 4.76923,-74.44175 4.74648,-74.43698 4.72435,-74.43242 4.71287,-74.42401 4.69968,-74.41557 4.69093,-74.41091 4.68009,-74.40366 4.66903,-74.38519 4.65307,-74.37876 4.64436,-74.3673 4.61879,-74.35323 4.60342,-74.34203 4.59568,-74.32123 4.58732,-74.30827 4.585,-74.29401 4.58643,-74.28195 4.59163,-74.27189 4.60008,-74.26469 4.61109,-74.26094 4.62371,-74.26098 4.63688,-74.28143 4.6971,-74.29009 4.70943,-74.30291 4.7208,-74.31079 4.725,-74.31323 4.7364,-74.31884 4.7486,-74.3332 4.76396,-74.32825 4.79322,-74.32959 4.80654,-74.33476 4.81888,-74.34331 4.82917,-74.35448 4.83649,-74.3673 4.84022,-74.38525 4.83905,-74.39962 4.83307,-74.41139 4.82359,-74.42065 4.81106,-74.42762 4.79447)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 215585 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030288-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ukz3e
title: Occurrence Download

description: A dataset containing 433 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vespula germanica",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 433 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030329-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5nfeay
title: Occurrence Download

description: A dataset containing 1599 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vespula germanica",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1599 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030328-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16923594
title: POEMAS December 2020 10ms

description: Data from the POEMAS instrument for December 2020, with a temporal resolution of 10ms. This record contains daily data files in one or more formats (e.g., ZIP, FITS, CSV).
DOI: 10.15468/dl.5bzpsb
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Enteromius diamouanganai)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 33 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030330-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nyttm4
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Incisocalliope aestuarius",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030331-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b7agsy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Incisocalliope aestuarius",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030332-250811113504898/datasets/export for details.
DOI: 10.15468/dl.qyuhz9
title: Occurrence Download

description: A dataset listing the 23 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-125.068359 48.57479, -137.460938 48.57479, -136.669922 40.111689, -133.417969 31.278551, -126.035156 21.453069, -117.246094 15.623037, -105.820313 23.563987, -125.068359 48.57479))",
 "TaxonKey is one of (Phocidae)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 23 records were derived from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030318-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w6xcv5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corophium acherusicum",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030335-250811113504898/datasets/export for details.
DOI: 10.15468/dl.r9kf58
title: Occurrence Download

description: A dataset containing 526807 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "GadmGid is one of (COL.2_2)",
 "TaxonKey is one of (Orchidaceae [GBIF Backbone Taxonomy])"
 ]
 }
 ]
}

 The dataset includes 526807 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030262-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uwfe2m
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gobiosoma bosc",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030338-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rxynex
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Schistura kongphengi)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030337-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ndfr2
title: Occurrence Download

description: A dataset listing the 204 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-125.068359 48.57479, -137.460938 48.57479, -136.669922 40.111689, -133.417969 31.278551, -126.035156 21.453069, -117.246094 15.623037, -105.820313 23.563987, -125.068359 48.57479))",
 "TaxonKey is one of (Cetacea)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 204 records were derived from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030325-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.efs7ky
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gobiosoma bosc",
 "Country is Germany",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030339-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16923539
title: POEMAS December 2020 10ms

description: Data from the POEMAS instrument for December 2020, with a temporal resolution of 10ms. This record contains daily data files in one or more formats (e.g., ZIP, FITS, CSV).
DOI: 10.5281/zenodo.16923605
title: POEMAS December 2020 10ms

description: Data from the POEMAS instrument for December 2020, with a temporal resolution of 10ms. This record contains daily data files in one or more formats (e.g., ZIP, FITS, CSV).
DOI: 10.15468/dl.tsyhtz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corophium insidiosum",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030341-250811113504898/datasets/export for details.
DOI: 10.5281/zenodo.16918856
title: A novel ensemble framework for background selection to improve species distribution models

description: Global occurrence coordinates of the taro caterpillar (Spodoptera litura Fabricius, 1775), the spotted lanternfly (Lycorma delicatula White, 1845), and the red imported fire ant (Solenopsis invicta Buren, 1972) were obtained from the Global Biodiversity Information Facility(GBIF) to predict the potential distribution under climate change. Spatial filtering was performed using ArcGIS to reduce sampling bias and improve model performance.

Meteorological were obtained from 1981 to 2010 at a 2.5 minute resolution, were obtained from CHLESA (www.chelsa-climate.org). After extracting the data related to land climate, the units were changed to the International System of Units using a raster calculator in ArcGIS. Then,  Then, the climate data was converted into 19 bioclimatic variables by using the “biovars” function in the “dismo” package of R software. Additinally, the meteorological data were processed to have a .mm file format for CLIMEX model using MetManager, a tool provided by CLIMEX.

We used ENMeval in the R package to determine the model features and regularization multiplier (RM). We also additionally used R for random forest.

Files and variables

File: occ_and_bg.zip: Occurrence and absence data for MaxEnt or random forest models.

File: code_R.zip: Example code for selecting optimal model structure of MaxEnt and operating Random forest.

File: Bioclimatic variables.zip: Selected bioclimatic variables for the models of three species.

File: Model results.zip: The species distribution model results of three species

Access information

Other publicly accessible locations of the data:



GBIF.org (3 May 2023) GBIF Occurrence Download https://doi.org/10.15468/dl.38d8u2

GBIF.org (31 July 2023) GBIF Occurrence Download https://doi.org/10.15468/dl.dryurf

GBIF.org (9 August 2023) GBIF Occurrence Download https://doi.org/10.15468/dl.ps6k67
DOI: 10.5281/zenodo.16918857
title: A novel ensemble framework for background selection to improve species distribution models

description: Global occurrence coordinates of the taro caterpillar (Spodoptera litura Fabricius, 1775), the spotted lanternfly (Lycorma delicatula White, 1845), and the red imported fire ant (Solenopsis invicta Buren, 1972) were obtained from the Global Biodiversity Information Facility(GBIF) to predict the potential distribution under climate change. Spatial filtering was performed using ArcGIS to reduce sampling bias and improve model performance.

Meteorological were obtained from 1981 to 2010 at a 2.5 minute resolution, were obtained from CHLESA (www.chelsa-climate.org). After extracting the data related to land climate, the units were changed to the International System of Units using a raster calculator in ArcGIS. Then,  Then, the climate data was converted into 19 bioclimatic variables by using the “biovars” function in the “dismo” package of R software. Additinally, the meteorological data were processed to have a .mm file format for CLIMEX model using MetManager, a tool provided by CLIMEX.

We used ENMeval in the R package to determine the model features and regularization multiplier (RM). We also additionally used R for random forest.

Files and variables

File: occ_and_bg.zip: Occurrence and absence data for MaxEnt or random forest models.

File: code_R.zip: Example code for selecting optimal model structure of MaxEnt and operating Random forest.

File: Bioclimatic variables.zip: Selected bioclimatic variables for the models of three species.

File: Model results.zip: The species distribution model results of three species

Access information

Other publicly accessible locations of the data:



GBIF.org (3 May 2023) GBIF Occurrence Download https://doi.org/10.15468/dl.38d8u2

GBIF.org (31 July 2023) GBIF Occurrence Download https://doi.org/10.15468/dl.dryurf

GBIF.org (9 August 2023) GBIF Occurrence Download https://doi.org/10.15468/dl.ps6k67
DOI: 10.15468/dl.54bzwk
title: Occurrence Download

description: A dataset containing 36413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gobiosoma bosc",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 36413 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030340-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18131/df6ab-k6882
title: GWAS of BRS in UKB
DOI: 10.18131/hzkp2-43f24
title: GWAS of BRS in UKB
DOI: 10.15468/dl.guncw2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corophium insidiosum",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030342-250811113504898/datasets/export for details.
DOI: 10.15468/dl.wsru3x
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Brachypetersius notospilus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030343-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsgey6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corophium insidiosum",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030347-250811113504898/datasets/export for details.
DOI: 10.15468/dl.j953bf
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micropogonias undulatus",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030349-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.