cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/8fknd58skm.1
title: Reconocimiento geológico-petrológico de la Sierra de las Navajas.

description: Este conjunto de datos contiene fotografías de rocas (tamaño muestra de mano), durante investigación geológica de la Sierra de las Navajas (SN), que es un volcán per-alcalino extinto, conformado por diferentes unidades litologicas, que se formaron en una edad Plio-Pleistoceno, localizado dentro de las carta geológico-minera F14D82 (1:50000), colindando al NW con la Sierra de Pachuca, NE con el campo volcánico Epazoyucan-Singuilucan y al S con el campo volcánico Apan-Tecomulco, reconocida por su producción de obsidiana desde la prehistoria. Esto principalmente con el interés de comprender la variedad composicional y evolución petrogenética de los magmas, además de ubicarlas espacialmente para una mejor visualización del contexto regional.
DOI: 10.17632/h7f5ps9c7j.1
title: Environmental Dimensions of Sustainable Development: Full Listings

description: A conglomeration of datasets from reputable sources concerning, socioeconomic and environmental indicators compiled in early 2020 from the most up-to-date information available.
DOI: 10.17632/vzyxkc2jxf.1
title: Simulation data and Supervised ML algorithms for Detecting nodes in LAA’s Hidden Zones.

description: LTE operation in unlicensed spectrum bands, based on Licensed-Assisted Access (LAA), is considered as an option to increase the capacity of 4G wireless networks. These solutions use a Listen Before Talk (LBT) protocol that enables the eNodeB (eNB) to access the medium opportunistically, avoiding collisions from/to other eNBs. However, the hidden node problem must be addressed in LAA networks to reduce or prevent the degradation of the network. The efficiency of the LTE-LAA system will improve by identifying hidden nodes and after deciding if user equipment (UE) affected by the hidden condition should remain or should change from unlicensed to licensed band. This dataset includes the simulation data of the performance parameters RSSI, RSRQ, RSRP, and CQI for nodes in hidden (overlapped) zone and free of collisions areas for a LTE-LAA network. The simulations were carried out in NS-3. Also, we include the code of two supervised machine learning algorithms, logistic regression, and a neural network to determine if UEs located in the border cell are affected by hidden nodes.
DOI: 10.17632/2zjmtnrdgd.1
title: Canadian Provincial Input-Output Tables of Embodied Emissions, 2010-2015

description: This dataset was created using an environmentally extended multi-region input-output (EE-MRIO) model, which uses an input and output approach that tracks flows of monetary values of trade to allot environmental impacts between regions and sectors. The MRIO model is a predominant method for the estimation of consumption-based greenhouse gas (GHG) accounting. Our particular model was constructed using Python. The tabulated results show the flows of emissions embodied in imports, exports, and domestic consumption of a region. In our case, we calculated the consumption emissions of all Canadian provinces and territories from 2010-2015. The tables show intersectoral, interprovincial, and international flows of embodied emissions, presented in the North American Industry Classification System (NAICS)" Regarding our model’s inputs for estimating embodied emissions in international trade, we utilized the Environmental Accounts and financial input-output tables from the World Input-Output Database (WIOD). For estimating embodied emissions in Canada and Canada’s trade, we used Canada’s Physical Flow Accounts, Interprovincial Input-Output and Supply-Use Tables, and Canada’s Trade Online Data. These datasets were accessed in August 2019 from the following websites (see links): • WIOD Input-Output Tables: http://www.wiod.org/home • WIOD Environmental Accounts 2013: http://www.wiod.org/home • WIOD Environmental Accounts 2019: https://ec.europa.eu/jrc/en/research-topic/economic-environmental-and-social-effects-of-globalisation • Interprovincial Input-Output Tables: https://www150.statcan.gc.ca/n1/en/catalogue/15-211-X • Interprovincial Supply-Use Tables: https://www150.statcan.gc.ca/n1/en/catalogue/15-602-X • Physical Flow Accounts: https://www150.statcan.gc.ca/t1/tbl1/en/tv.action?pid=3810009701 • Canada’s Trade Online Data: https://www.ic.gc.ca/eic/site/tdo-dcd.nsf/eng/Home
DOI: 10.17632/35jwmt3mk3.1
title: Appendix A. Supplementary data

description: This is the appendix of the paper to supplement the research data of the paper
DOI: 10.17632/nwt5m8ktgt.1
title: Quantifying the Central Dogma in the p53 Pathway in Single Cells

description: Data and scripts to reproduce results in: Hafner, Reyes, Stewart-Ornstein, Tsabar, Jambhekar and Lahav (2020) "Quantifying the Central Dogma in the p53 Pathway in Single Cells", Cell Systems. Please cite our manuscript if you use this dataset.
DOI: 10.17632/v4bfp9dj3y.1
title: Identification of conserved gene-regulatory networks that integrate environmental sensing and growth in the root cambium
DOI: 10.26182/5ed9d2e615d39
title: RefKA wheat genome assemblies
DOI: 10.17632/558s8cwfty.1
title: Regulatory and safety considerations in deploying a locally-fabricated, reusable, face shield in a hospital responding to the COVID-19 pandemic. Mostaghimi et al

description: This dataset corresponds to the supplementary materials of the article "Regulatory and safety considerations in deploying a locally-fabricated, reusable, face shield in a hospital responding to the COVID-19 pandemic." It contains the IRB Questionnaire used, the design files of the face shield, the manufacturing instruction and labels, and the IRB Questionaire results.
DOI: 10.17632/7ggdtb8g2r.1
title: Trajectory data of molecular dynamics simulation of SARS-CoV-2 RNA-dependent RNA polymerase with/without template RNA and Remdesivir triphosphate

description: MD simulations were performed using Desmond on supercomputer TSUBAME 3.0. SARS-CoV-2 RdRp (also named nsp12) with/without template RNA and Remdesivir triphosphate complex models were placed in the orthorhombic box with a buffer distance of 10 Å in order to create a hydration model. TIP3P water model was used for creation of the hydration model. We performed MD simulations under the NPT ensemble for 1 μs on three complex structures using OPLS3e force field.
DOI: 10.17632/8hv5grr49s.1
title: Machine learning assessment of frp-strengthened and reinforced concrete members
DOI: 10.5281/zenodo.3877624
title: ds-uct-002: Root Canal Strain: X-Ray micro-CT of four teeth before and after root canal procedure.

description: <strong>Summary</strong>:<br> .X-Ray micro-computed tomography (micro-CT) of four teeth before (TomoB) and after (TomoA) simulation of root canal treatment and retreatment procedures instrumented with strain-gauge, including reconstructions, for two different resolutions (TomoB and TomoA with voxel sizes of 20.0 μm and 10.5 μm, respectively).<br> .The 3D image was generated with an X-Ray micro-CT Scanner version Xradia Versa 510 from Zeiss performed by A Pereira at the UFF micro-CT Facility.<br> .For use of these data, please remember to cite the DOI of the Zenodo repository and relevant papers. <strong>Details</strong>:<br> .Tomo1B/Tomo2B/Tomo3B/Tomo4B (1024) - Voxel size: 20.0 μm; Sample-source: 45.0 mm; Sample-detector: 110 mm; Optical magnification: 0.4X; Filter: LE#1; Beam energy: 60 kV; Power: 5 W; Exposure time: 2.0 sec; Projections: 1600.<br> .Tomo1A/Tomo2A/Tomo3A/Tomo4A (2048) - Voxel size: 10.5 μm; Sample-source: 48.2 mm; Sample-detector: 110 mm; Optical magnification: 0.4X; Filter: LE#2; Beam energy: 60 kV; Power: 5 W; Exposure time: 7.0 sec; Projections: 1600. <strong>Contents</strong>:<br> ._info_ds-uct-002.txt<br> .ds-uct-002_root_canal_strain_tomo1b_20um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo2b_20um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo3b_20um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo4b_20um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo1a_10um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo2a_10um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo3a_10um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo4a_10um_8bits.zip<br> .PB_PARECER_CONSUBSTANCIADO_CEP_2650528.pdf
DOI: 10.5281/zenodo.3877625
title: ds-uct-002: Root Canal Strain: X-Ray micro-CT of four teeth before and after root canal procedure.

description: <strong>Summary</strong>:<br> .X-Ray micro-computed tomography (micro-CT) of four teeth before (TomoB) and after (TomoA) simulation of root canal treatment and retreatment procedures instrumented with strain-gauge, including reconstructions, for two different resolutions (TomoB and TomoA with voxel sizes of 20.0 μm and 10.5 μm, respectively).<br> .The 3D image was generated with an X-Ray micro-CT Scanner version Xradia Versa 510 from Zeiss performed by A Pereira at the UFF micro-CT Facility.<br> .For use of these data, please remember to cite the DOI of the Zenodo repository and relevant papers. <strong>Details</strong>:<br> .Tomo1B/Tomo2B/Tomo3B/Tomo4B (1024) - Voxel size: 20.0 μm; Sample-source: 45.0 mm; Sample-detector: 110 mm; Optical magnification: 0.4X; Filter: LE#1; Beam energy: 60 kV; Power: 5 W; Exposure time: 2.0 sec; Projections: 1600.<br> .Tomo1A/Tomo2A/Tomo3A/Tomo4A (2048) - Voxel size: 10.5 μm; Sample-source: 48.2 mm; Sample-detector: 110 mm; Optical magnification: 0.4X; Filter: LE#2; Beam energy: 60 kV; Power: 5 W; Exposure time: 7.0 sec; Projections: 1600. <strong>Contents</strong>:<br> ._info_ds-uct-002.txt<br> .ds-uct-002_root_canal_strain_tomo1b_20um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo2b_20um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo3b_20um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo4b_20um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo1a_10um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo2a_10um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo3a_10um_8bits.zip<br> .ds-uct-002_root_canal_strain_tomo4a_10um_8bits.zip<br> .PB_PARECER_CONSUBSTANCIADO_CEP_2650528.pdf
DOI: 10.5281/zenodo.3877886
title: bhermann/artifact-survey: v2 - Pre-Artifact Evaluation

description: This is the version of the artifact which was submitted to the artifact evaluation track of ESEC/FSE 2020. (Note: Manually uploaded as zenodo's automated process was not available.)
DOI: 10.15161/oar.it/23710
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.17632/98xcryjtnc.4
title: Data for: Selective CD8 cell removal by SARS-CoV-2 is associated with a worse prognosis and systemic inflammation in COVID-19 patients.

description: Table in excel format with the data and the averages of the work
DOI: 10.17632/22xhb5jsvn.4
title: Thermal affect: A six-dimensional semantic space to assess outdoor thermal comfort

description: Here, we proposed a six-dimensional semantic framework for outdoor thermal comfort assessments comprising four descriptive - ‘thermal sensation’, ‘humidity’, ‘wind’ and ‘solar radiation,’ plus two affective - ‘thermal pleasure’ and ‘thermal intensity’ dimensions. In Phase 1 an online questionnaire recruited 135 native English-speakers to place 76 climatic adjectives into this six-dimensional semantic space. Phase 2 launched a field study with another 22 subjects locating real-time outdoor thermal experiences in the same semantic space. They were then asked to select from a subset of the 76 climatic adjectives those that best described their right here- right-now thermal experience. Validation was then performed by comparing coordinates of the 31 most frequently chosen adjectives in Phase 2 with those assigned to them in Phase 1. Good correlations (R2 &gt; 0.65) of adjectives’ coordinates between the two research phases indicate consistency regarding which adjectives best describe specific scenarios, regardless of seasons, locations, or current exposures. In this database, we uploaded the average adjectives' scores achieved in the online questionnaire and the Retrieval process of the 10 most likely climatic adjectives to describe the thermal feelings based on the right-here-right-now thermal experience.
DOI: 10.17632/5vwrhmy2dg.4
title: Data for: Climate models predict a divergent future for the medicinal tree Boswellia serrata Roxb. in India

description: Data is associated with the submitted manuscript title " Climate models predict a divergent future for the medicinal tree Boswellia serrata Roxb. in India"
DOI: 10.17632/nbbx2x83x6.1
title: Data for: Antiseizure compounds from the ancient Greek medicinal plant Helleborus odorus subsp. cyclophyllus and study of its chemical composition

description: The complete annotated molecular network with all the annotations, and in particular the first 6 levels, is available as an associated file in the Mendeley Data repository (Cytoscape file).
DOI: 10.17632/vkb3k4yprn.1
title: Data: "Mapping catchment-scale unmonitored groundwater abstractions: Approaches based on soft data"

description: Data used in paper: H. M. Vu, M. Shanafield, T. T. Nhat, D. Partington, and O. Batelaan, 2020, Mapping catchment-scale unmonitored groundwater abstractions: Approaches based on soft data. Journal of Hydrology: Regional Studies
DOI: 10.17632/j578n3fpkx.1
title: Experimental data for strain rate sensitivity, microstructure variations, and stress-assisted β → α'' phase transformation investigation on the mechanical behavior of dual-phased titanium alloys

description: Data required to reproduce the findings of the following publication: Kartik Kapoor, Priya Ravi, Diwakar Naragani, Jun-Sang Park, Jonathan D. Almer, Michael D. Sangid, Strain rate sensitivity, microstructure variations, and stress-assisted β → α” phase transformation investigation on the mechanical behavior of dual-phased titanium alloys, Materials Characterization, 2020, 110410, ISSN 1044-5803, https://doi.org/10.1016/j.matchar.2020.110410. The data consists of one Excel file with 8 sheets. Each sheet corresponds to the following figures in the paper: Sheet1 (Fig. 1b): Stress-strain curves for the alloys. Sheet2 (Fig. 3): SRS values corresponding to macroscopic strain for the alloys. Sheet3 (Fig. 4): Lattice strains corresponding to macroscopic strain for the alloys. Sheet4 (Fig. 5): Lattice hardening corresponding to applied stress for the alloys. Sheet5 (Fig. 7c): Lattice strain evolution corresponding to macroscopic strain in Ti-6246. Sheet6 (Fig. 7d): Volume fraction of the different phases corresponding to macroscopic strain in Ti-6246 specimen. Sheet7 (Fig. 8): Experimental and analytical lattice strain in α" phase in Ti-6246. Sheet8 (Fig. C1): Axial and transverse lattice strains corresponding to macroscopic strain for the alloys.
DOI: 10.17632/njz3gx3w2d.10
title: Dataset for MDPI Antioxidants (2020)

description: The following files are associated with the manuscript "Flavones’ and Flavonols’ Antiradical Structure–Activity Relationship—A Quantum Chemical Study", MDPI Antioxidants, 2020 (https://doi.org/10.3390/antiox9060461). They include geometries of molecules used therein and allows to reproduce the obtained results.
DOI: 10.17632/77xhsdzk3y.8
title: Dataset for MDPI Molecules (2020)

description: The following files are associated with the manuscript "Antiradical Activity of Selected Phenolic Acids – FRAP Assay and QSAR Analysis of the Structural Features", MDPI Molecules, 2020. They include geometries of molecules used therein and allows to reproduce the obtained results.
DOI: 10.5281/zenodo.3877288
title: Annotation and analysis of the secondary structure elements in the Cytochrome P450 protein family

description: We collected all currently available structures for proteins in the Cytochrome P450 family and annotated their secondary structure elements using SecStrAnnotator software (https://webchem.ncbr.muni.cz/Wiki/SecStrAnnotator). We used 2nnjA as the template domain for the annotation. Based on these annotations, we analysed the occurrence, length distribution, amino acid sequence, and presence of structural irregularities (β-bulges, 3<sub>10</sub>-helices, π-helices) of each secondary structure element class. We also statistically compared the bacterial vs eukaryotic structures. For the secondary structure element classes with sufficient sequence conservation, the most conserved residue is annotated as the reference residue. Main files: <strong>set_ALL_20200323.json</strong> - Set-ALL: list of 973 protein domains belonging to the Cytochrome P450 family (CATH accession 1.10.630.10 + Pfam accession PF00067, accessed on 23 March 2020, one domain per PDB entry) <strong>set_NR_20200323.json</strong> - Set-NR: non-redundant list of 175 domains (one domain per UniProt ID) <strong>domain_lists_table.tsv</strong> - Overview of Set-ALL and Set-NR and separation into subsets Set-NR-Bact (bacterial), Set-NR-Euka (eukaryotic), Set-NR-Arch (archaeal), Set-NR-Viru (viral) <strong>structures/2NNJ-template.sses.json</strong> - Manually prepared annotation template (domain 2nnjA) <strong>annotations_with_reference_residues_ALL.json, annotations_with_reference_residues_ALL.tsv</strong> - Annotation of secondary structure elements for Set-ALL <strong>annotations_with_reference_residues_NR.json, annotations_with_reference_residues_NR.tsv</strong> - Annotation of secondary structure elements for Set-NR <strong>aligments_NR</strong> - Multiple sequence alignments for each SSE class (Set-NR) <strong>logos_NR</strong> - Sequence logos for each SSE class (Set-NR) <strong>plots</strong> - Plots of SSE occurrence, length distribution, contained helix types and beta-bulge occurrence (Set-NR), some plots show the comparison between Set-NR-Bact and Set-NR-Euka <strong>plots/statistical_tests.odt</strong> - Comparison of SSE occurrence between Set-NR-Bact and Set-NR-Euka by the test of equal proportions and the Fisher test, comparision of the SSE length by the Kolmogorov-Smirnov test and the two-sample Wilcoxon test
description: {"references": ["Midlik A, Navr\u00e1tilov\u00e1 V, Moturu TR, Ko\u010da J, Svobodov\u00e1 R, Berka K. Uncovering of Cytochrome P450 Anatomy by SecStrAnnotator. bioRxiv 2020.04.15.042531. doi: 10.1101/2020.04.15.042531"]}
DOI: 10.15139/s3/jnw5xe
title: Migrant and Seasonal Farmworker Health Research Mapping Review Bibliographies

description: Bibliographies from mapping review project. Research reported in this publication was supported by the National Library of Medicine of the National Institutes of Health under Award Number G08LM013198. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.
DOI: 10.5281/zenodo.3878413
title: GOAL cetacean sighting data summer 2020

description: Cetacean sighting data from summer (feb-mar) 2020 collected by GOAL/Interbiota project team under activities of PROANTAR (Brazilian Antarctic Program). There are three sheets: one for sightings, other for effort (transects) and one with GPS data.
DOI: 10.5281/zenodo.3878414
title: GOAL cetacean sighting data summer 2020

description: Cetacean sighting data from summer (feb-mar) 2020 collected by GOAL/Interbiota project team under activities of PROANTAR (Brazilian Antarctic Program). There are three sheets: one for sightings, other for effort (transects) and one with GPS data.
DOI: 10.5284/1078328
title: St Nicholas House, 47 London Road, Gloucester, Gloucestershire. Archaeological Watching Brief (OASIS ID: urbanarc1-342180)

description: During February 2019 and March 2020 Urban Archaeology undertook an archaeological watching brief during the renovation of St Nicholas House, Gloucester, Gloucestershire. Two test pits were excavated in the basement of the property and an external service trench was monitored. The construction of St Nicholas House has caused a general truncation to c14.08m OD within the footprint of the building and has removed any horizontal archaeological deposits from this area. The surface of the natural Lias Clay substrate had been truncated within the internal test pits, and was not reached in the external works. The original ground level cannot therefore be ascertained, although it probably lies between 14.10 and 14.81m OD. Within the basement test pits two cut features (not excavated) are likely to be part of the same ditch, or a large quarry pit for clay extraction. Finds from the surface of the features suggest a later post-medieval date for the infilling, pre-dating the construction of St Nicholas House. Residual Roman pottery indicates the likely presence of Roman activity within the area. Externally the homogenous dark grey brown soil deposit is typical of post-Roman 'Dark Earth' and cultivation soil deposits observed at sites in the area. There was no evidence for buildings or other occupation along the London Road frontage. The external foundations of St Nicholas House were exposed in the external trench; the street frontage was built in brick, but the side walls in Lias blocks, presumably for reasons of cost. A brick tank or interceptor at the south of the forecourt may be associated with the bus depot.
DOI: 10.5281/zenodo.3877928
title: Magnetic properties of the Chromite-Magnetite series and the monitoring of Cr-spinels alteration in ultramafic and mafic rocks

description: Supplementary data for : Magnetic properties of the Chromite-Magnetite series and the monitoring of Cr-spinels alteration in ultramafic and mafic rocks by Hodel et al. submitted to G-cubed.
DOI: 10.5281/zenodo.3877929
title: Magnetic properties of the Chromite-Magnetite series and the monitoring of Cr-spinels alteration in ultramafic and mafic rocks

description: Supplementary data for : Magnetic properties of the Chromite-Magnetite series and the monitoring of Cr-spinels alteration in ultramafic and mafic rocks by Hodel et al. submitted to G-cubed.