cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.6b5n7
title: Data from: Exceptional avian herbivores: multiple transitions toward herbivory in the bird order Anseriformes and its correlation with body mass

description: Herbivory is rare among birds and is usually thought to have evolved
 predominately among large, flightless birds due to energetic constraints
 or an association with increased body mass. Nearly all members of the bird
 order Anseriformes, which includes ducks, geese, and swans, are flighted
 and many are predominately herbivorous. However, it is unknown whether
 herbivory represents a derived state for the order and how many times a
 predominately herbivorous diet may have evolved. Compiling data from over
 200 published diet studies to create a continuous character for herbivory,
 models of trait evolution support at least five independent transitions
 toward a predominately herbivorous diet in Anseriformes. Although a
 nonphylogenetic correlation test recovers a significant positive
 correlation between herbivory and body mass, this correlation is not
 significant when accounting for phylogeny. These results indicate a lack
 of support for the hypothesis that a larger body mass confers an advantage
 in the digestion of low-quality diets but does not exclude the possibility
 that shifts to a more abundant food source have driven shifts toward
 herbivory in other bird lineages. The exceptional number of transitions
 toward a more herbivorous diet in Anseriformes and lack of correlation
 with body mass prompts a reinterpretation of the relatively infrequent
 origination of herbivory among flighted birds.
description: AppendixIndex for all appendix resources, normalization of diet trait values, strict consensus tree for included taxa, AICc scores for models of diet evolution, ancestral state reconstruction of folivory, non-phylogenetic correlation of folivory index and body mass, ranges of phylogenetic signal in herbivory and body mass, correlation of folivory and body mass contrasts, literature cited in meta-analysis.Appendix S1Excel spreadsheet with the complete diet and body mass (from Dunning 2008) dataset, including associated metadata, listed by species, season and locality.Appendix S2Excel spreadsheet containing the mean dietary category sums, dietary indices and body masses for each species in Appendix S1 (compact version of Appendix S1).Appendix S10Phylogenetic independent contrast results, correlation coefficients and branch length transformations.
DOI: 10.5061/dryad.71f99
title: Data from: Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd’s purse (Capsella bursa-pastoris)

description: Polyploidization is a dominant feature of flowering plant evolution.
 However, detailed genomic analyses of the inter-population diversification
 of polyploids following genome duplication are still in their infancy,
 mainly because of methodological limits, both in terms of sequencing and
 computational analyses. The shepherd’s purse (Capsella bursa-pastoris) is
 one of the most common weed species in the world. It is highly
 self-fertilizing, and recent genomic data indicate that it is an
 allopolyploid, resulting from hybridization between the ancestors of the
 diploid species Capsella grandiflora and Capsella orientalis. Here, we
 investigated the genomic diversity of C. bursa-pastoris, its population
 structure and demographic history, following allopolyploidization in
 Eurasia. To that end, we genotyped 261 C. bursa-pastoris accessions spread
 across Europe, the Middle East and Asia, using genotyping-by-sequencing,
 leading to a total of 4,274 SNPs after quality control. Bayesian
 clustering analyses revealed three distinct genetic clusters in Eurasia:
 one cluster grouping samples from Western Europe and Southeastern Siberia,
 the second one centered on Eastern Asia and the third one in the Middle
 East. Approximate Bayesian computation (ABC) supported the hypothesis that
 C. bursa-pastoris underwent a typical colonization history involving low
 gene flow among colonizing populations, likely starting from the Middle
 East towards Europe and followed by successive human-mediated expansions
 into Eastern Asia. Altogether, these findings bring new insights into the
 recent multistage colonization history of the allotetraploid C.
 bursa-pastoris and highlight ABC and genotyping-by-sequencing data as
 promising but still challenging tools to infer demographic histories of
 selfing allopolyploids.
description: Final GBS vcf dataset
 4274 SNPsFinal GBS dataset used
 for population genetic inferences (.vcf) and its associated information
 for each sample used (X/Y, Country, cluster assignation,
 ID).merged_filt_depth_75_200_ssduplicateindANDsnp-ssblanck_DEF_for_structure.vcfInput ADMIXTURE filesADMIXTURE input files used to infer popuation genetic structure using the 4274 SNPsADMIXTURE_INPUT_4274SNPS-def.zipGenetic_AND_metric_distance_per_clusterPairwise Genetic and Matrix distances among localities within each genetic groups (EUR,ASI, ME) to test for IBD
DOI: 10.5061/dryad.6s6rb
title: Data from: Onshore industrial wind turbine locations for the United States up to March 2014

description: Wind energy is a rapidly growing form of renewable energy in the United
 States. While summary information on the total amounts of installed
 capacity are available by state, a free, centralized, national,
 turbine-level, geospatial dataset useful for scientific research, land and
 resource management, and other uses did not exist. Available in multiple
 formats and in a web application, these public domain data provide
 industrial-scale onshore wind turbine locations in the United States up to
 March 2014, corresponding facility information, and turbine technical
 specifications. Wind turbine records have been collected and compiled from
 various public sources, digitized or position verified from aerial
 imagery, and quality assured and quality controlled. Technical
 specifications for turbines were assigned based on the wind turbine make
 and model as described in public literature. In some cases, turbines were
 not seen in imagery or turbine information did not exist or was difficult
 to obtain. Uncertainty associated with these is recorded in a confidence
 rating.
description: Onshore Industrial Wind
 Turbine Locations for the United StatesThis data set provides
 industrial-scale onshore wind turbine locations in the United States up to
 March 2014, corresponding facility information, and turbine technical
 specificationsUSGSWind_Turbine_03_2014.zip
DOI: 10.5061/dryad.986
title: Data from: It's about time: the temporal dynamics of phenotypic selection in the wild

description: Selection is a central process in nature. Although our understanding of
 the strength and form of selection has increased, a general understanding
 of the temporal dynamics of selection in nature is lacking. Here, we
 assembled a database of temporal replicates of selection from studies of
 wild populations to synthesize what we do (and do not) know about the
 temporal dynamics of selection. Our database contains 5519 estimates of
 selection from 89 studies, including estimates of both direct and indirect
 selection as well as linear and nonlinear selection. Morphological traits
 and studies focused on vertebrates were well-represented, with other
 traits and taxonomic groups less well-represented. Overall, three major
 features characterize the temporal dynamics of selection. First, the
 strength of selection often varies considerably from year to year,
 although random sampling error of selection coefficients may impose bias
 in estimates of the magnitude of such variation. Second, changes in the
 direction of selection are frequent. Third, changes in the form of
 selection are likely common, but harder to quantify. Although few studies
 have identified causal mechanisms underlying temporal variation in the
 strength, direction and form of selection, variation in environmental
 conditions driven by climatic fluctuations appear to be common and
 important.
description: Appendix
 1.xls
DOI: 10.5061/dryad.pq827
title: Data from: Germline DNA methylation in reef corals: patterns and potential roles in response to environmental change

description: DNA methylation is an epigenetic mark that plays an inadequately
 understood role in gene regulation, particularly in non-model species.
 Because it can be influenced by the environment, DNA methylation may
 contribute to the ability of organisms to acclimatize and adapt to
 environmental change. We evaluated the distribution of gene body
 methylation in reef-building corals, a group of organisms facing
 significant environmental threats. Gene body methylation in six species of
 corals was inferred from in silico transcriptome analysis of CpG O/E, an
 estimate of germline DNA methylation that is highly correlated with
 patterns of methylation enrichment. Consistent with what has been
 documented in most other invertebrates, all corals exhibited bimodal
 distributions of germline methylation suggestive of distinct fractions of
 genes with high and low levels of methylation. The hypermethylated
 fractions were enriched with genes with housekeeping functions, while
 genes with inducible functions were highly represented in the
 hypomethylated fractions. High transcript abundance was associated with
 intermediate levels of methylation. In three of the coral species, we
 found that genes differentially expressed in response to thermal stress
 and ocean acidification exhibited significantly lower levels of
 methylation. These results support a link between gene body
 hypomethylation and transcriptional plasticity that may point to a role of
 DNA methylation in the response of corals to environmental change.
description: Data derived from
 original transcriptome dataCoral_CpG_Data.zip
DOI: 10.5281/zenodo.11160893
title: Global urban and rural settlement dataset from 2000 to 2020

description: Accurate mapping of global urban and rural settlements is crucial for understanding their distinct expansion patterns and ecological impacts. However, existing global datasets focus mainly on urban settlements and ignore the delineation of rural settlements. Therefore, this study proposed a framework for delineating between urban and rural settlements based on dynamic thresholds defined by area and light brightness and constructed the first global 100-meter resolution urban and rural settlements dataset (GURS) spanning from 2000 to 2020, integrating GHS-BUILT-S R2023A, NPP-VIIRS-like nighttime light, and OpenStreetMap data. An accuracy assessment of 44,474 independent samples showed that GURS achieved an overall accuracy of 91.22% with a kappa coefficient of 0.85, outperforming nine multi-scale reference datasets in delineating global urban and rural settlements. GURS offers deep insights into the dynamics of global settlements, facilitating urban-rural comparative studies on socio-economic characteristics, environmental impacts, and governance modes, thereby enhancing the sustainable management of settlements.
DOI: 10.15468/dl.vfs3vn
title: Occurrence Download

description: A dataset containing 19584 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cedrela odorata L."
 ]
}

 The dataset includes 19584 records from 568 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013784-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13863425
title: Global Genomic Neurofibromatosis Neoplasia
DOI: 10.15468/dl.9gubg2
title: Occurrence Download

description: A dataset containing 9039 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crocuta crocuta"
 ]
}

 The dataset includes 9039 records from 134 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007537-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14470/7r7567193925
title: Southwest Indian Ridge Earthquakes and Hydrothermal Plumes (SWEAP)

description: Project SWEAP (Southwest Indian Ridge Earthquakes and Plumes), a collaborative effort led by the Alfred-Wegener-Institute, installed a network of 10 broad-band ocean bottom seismometers (OBS) along the ultraslow-spreading Oblique Supersegment of the Southwest Indian Ridge. The presented data set covers the continuous records of 8 stations of the network provided by the DEPAS instrument pool. One station of the original network could not be recovered, another one did not return data. The instruments were spaced at roughly 15 km intervals in a triangular shape network to either side of the rift axis covering about 60 km along axis between 13°E and 13.8°E and 60 km across axis between 52°S and 52.6°S. The determination of the OBS positions is described by Schmid et al. (2016). The network design was optimized for detecting and locating deep seismicity in the area. The rift valley was filled with soft silica ooze, producing considerable delay of S-phases at selected stations. Instrument deployment started during RV Polarstern cruise ANT-XXIX/2 on December 05 2012. Instrument recovery was completed during RV Polarstern cruise ANT-XXIX/8 on November 26 2013. 5 Refraction seismic lines were acquired by RV Polarstern cruise ANT-XXIX/8 from November 17 to 19 in 2013. All OBS could be synchronized with the GPS clock upon recovery such that skew values describing the clock drift are available for all stations. The non-linear clock drift of station SWE05 was determined by means of noise cross-correlations and applied to the data set. All other stations show a linear drift, which was corrected.
DOI: 10.15468/dl.48s2h7
title: Occurrence Download

description: A dataset containing 3694 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-2.3549 43.60698,-5.89101 44.12912,-7.93599 44.7678,-9.72535 42.89327,-10.02357 39.39767,-9.76795 37.46216,-7.93599 36.37221,-6.14663 35.95948,-4.6555 36.26923,-2.22709 36.47505,0.11611 37.63105,4.71731 38.96836,4.71731 40.11819,3.4818 41.72761,3.05577 42.36038,-2.3549 43.60698))",
 "HasGeospatialIssue is false",
 "TaxonKey is Senecio lividus"
 ]
}

 The dataset includes 3694 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007540-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mp7vm3
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Egypt",
 "TaxonKey is Blepharopsis mendica mendica"
 ]
}

 The dataset includes 29 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007543-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9uru9v
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dyacopterus rickarti Helgen, Kock, Gomez & Ingle, 2007"
 ]
}

 The dataset includes 13 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009762-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c77r2m
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amaralia oviraptor)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024747-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/ddx-scg-fc3
title: Ribes uva-crispa var. sativum DC.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/dn3-j5s-0yf
title: Phragmites australis (Cav.) Trin. ex Steud.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/tgt-c65-jbb
title: Carex limosa L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15468/dl.4evae8
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is one of (Spain, Portugal, Andorra)",
 "DatasetKey is one of (Flora vascular de Mallorca, Illes Balears, FloraCAT: Banco de datos de los cormófitos de Cataluña, CSIC-Real Jardín Botánico-Colección de Plantas Vasculares (MA), Banco de Datos de la Biodiversidad de la Comunitat Valenciana)",
 "OccurrenceStatus is Present",
 "TaxonKey is Senecio angulatus"
 ]
}

 The dataset includes 468 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009683-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/q06-ltd-bj5
title: Carex pulicaris L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/q42-b6x-bx0
title: Carex appropinquata Schumach.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/mj5-119-w3s
title: Agrostis vinealis Schreb.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/scj-4q2-1ts
title: Dactylorhiza viridis (L.) R.M.Bateman, Pridgeon & M.W.Chase

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/ymd-pxt-93e
title: Potentilla intermedia L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/q40-t1b-93r
title: Puccinellia distans (Jacq.) Parl.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/x5z-0zh-z78
title: Agrostis vinealis Schreb.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/yq1-2y8-dmg
title: Stellaria media (L.) Vill.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/4dt-hht-nkk
title: Geranium lucidum L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/js6-d2r-kbt
title: Argentina anserina subsp. anserina

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/kmg-tsk-x2w
title: Carex canescens L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/l44-ykw-6h1
title: Argentina anserina subsp. anserina

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/nt5-lnt-7yy
title: Geranium sanguineum L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/s0s-j8e-dlv
title: Carex canescens L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/xh7-j2k-dns
title: Spergularia marina (L.) Besser

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/9yw-spk-0zj
title: Carex pulicaris L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/tl1-5b6-ztk
title: Thlaspi arvense L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/3hr-zdj-ekf
title: Potentilla intermedia L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/4dx-yte-cx7
title: Dactylorhiza viridis (L.) R.M.Bateman, Pridgeon & M.W.Chase

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/ag4-yy7-n8n
title: Carex appropinquata Schumach.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/lh4-8gp-fnw
title: Agrostis vinealis Schreb.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/3yn-glz-ecf
title: Carex hirta L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/sf6-m22-6b4
title: Alchemilla acutiloba Opiz

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/v8n-5qd-gxp
title: Stellaria media (L.) Vill.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/9ky-cxf-rjw
title: Plantae

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/bls-yjt-15s
title: Vicia cracca L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/stv-rn4-4rt
title: Carex hirta L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/4zn-06b-jph
title: Carex aquatilis Wahlenb.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/veh-01w-x21
title: Astragalus alpinus L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/xjn-p2m-adb
title: Agrostis vinealis Schreb.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/0e9-q6h-20b
title: Carex hirta L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/erg-wc1-cjj
title: Carex hirta L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/sac-szy-a2s
title: Carex hirta L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/61y-8fz-0my
title: Noccaea caerulescens subsp. brachypetala (Jord.) Tzvelev

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/8e9-7rj-tb1
title: Carex leporina L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/sa5-7by-tjq
title: Vicia cracca L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/11w-08d-exw
title: Equisetum arvense L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/5z1-pak-83x
title: Carex canescens L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/2ly-70x-j40
title: Carex canescens L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/dqf-q61-m8z
title: Selaginoides spinulosa (A. Braun ex Döll) Li Bing Zhang & X. M. Zhou

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/e21-psc-4qr
title: Carex canescens L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.