cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.sba4ew
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilopsis sallei",
 "Country is Israel",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032398-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j2k48u
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilopsis sallei",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032399-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d5t487
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilopsis sallei",
 "Country is Malaysia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032400-250920141307145/datasets/export for details.
DOI: 10.15468/dl.b3xjw4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilopsis sallei",
 "Country is Philippines",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032405-250920141307145/datasets/export for details.
DOI: 10.15468/dl.cn6xu9
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilopsis sallei",
 "Country is Singapore",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032407-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9fjnkp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilopsis sallei",
 "Country is Senegal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032406-250920141307145/datasets/export for details.
DOI: 10.15468/dl.tpgcsr
title: Occurrence Download

description: A dataset containing 18169 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Base de datos del Herbario CIQR de El Colegio de la Frontera Sur, unidad Chetumal"
 ]
}

 The dataset includes 18169 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032404-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8s3wmw
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilopsis sallei",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032409-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bdckzv
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilopsis sallei",
 "Country is Venezuela (Bolivarian Republic of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032410-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.984842
title: Hand-labeled ground truth images of ice thick section microphotographs of the EDML ice core to evaluate air hydrate segmentation performance

description: In the deeper part of polar ice sheets, air hydrates are the primary air inclusions. They trap most of the ancient air molecules used for paleoclimatic reconstructions in their crystal structure. Furthermore, their number and size was found to correlate with past climate. Microphotographs of ice thick sections of the EPICA Dronning Maud Land (EDML) ice core were obtained in the years 2002 - 2006 during the Antarctic field season, shortly after the sample was drilled, using an optical microscope (Kipfstuhl et al., 2006; Kipfstuhl, 2007). This dataset presents eight ground truth (GT) images with the dimensions of 20 x 10 mm together with masks of hand-labeled air hydrates differentiated into five visual categories. The visual categories are: Above focus (AF), In focus, Below focus (BF), Far out of focus (FOF) and air hydrates that can hardly be distinguished from other image artifacts (X).
description: A GT-set includes the following images (example for 1285.01C):- 1285.01C_GT_crop: The cropped microphotograph of sample 1285.01C.- 1285.01C_segmented: The automatically segmented microphotograph.- all_labels_1285: Masks of hand-labeled air hydrates including all visual categories.- AF_1285, focus_1285, BF_1285, FOF_1285, X_1285: Masks including air hydrates of only one visual category.The images were labeled and analyzed by Florian Painer at the Alfred Wegener Institute, Bremerhaven and the analysis routines were implemented in Python using open-source libraries. The aim was to develop a semi-automated analysis routine and to provide a high-resolution record of air hydrate properties of the EDML ice core.
DOI: 10.15468/dl.kj7h9b
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Triops longicaudatus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 143 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032412-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pzrg2t
title: Occurrence Download

description: A dataset containing 281 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ailuropoda melanoleuca"
 ]
}

 The dataset includes 281 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032413-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.thfp5z
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trogonophis wiegmanni elegans)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 28 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032414-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xae9bn
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argopecten irradians",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032415-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mnq32d
title: Occurrence Download

description: A dataset containing 18169 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Base de datos del Herbario CIQR de El Colegio de la Frontera Sur, unidad Chetumal"
 ]
}

 The dataset includes 18169 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032416-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.984706
title: Stable water isotopes (δ18O) of ice core EDML from 2416 m to 2773.5 m

description: The European Project for Ice Coring in Antarctica (EPICA) focused on the drilling of two deep ice cores, the first at Dome C (EDC) and the second at Kohnen station (75°00' S, 0°04' E) in Dronning Maud Land (EDML). This dataset presents the stable water isotopes (δ18O) of the EDML ice core from 2416 m to 2773.5 m in 0.5 m resolution. Ice samples were measured at the Alfred Wegener Institute in Bremerhaven and Potsdam using mass spectrometry.This dataset can be seen as an extension to EPICA Community Members (2010). However, note that the EDML ice core is dated down to approx. 2416 m depth because the match between EDML and EDC becomes ambiguous further down (Ruth et al., 2007).
DOI: 10.6069/3t8x-qe19
title: ARID1A Mutations Promote Immune Evasion of Follicular Lymphoma Through Reduced RUNX3/ETS1-Driven FAS-Expression and FAS/FASLG-Mediated Apoptosis

description: The cell death receptor FAS and its ligand (FASLG) play a crucial role in the negative selection of B cells during the germinal center (GC) reaction. Failure to eliminate potentially harmful B cells can lead to the development B cell malignancies. Follicular lymphoma (FL) is a prototypic GC-derived B cell malignancy. Translocation and overexpression of antiapoptotic BCL2 is a hallmark of FL. Additional alterations have been shown to be clinically relevant, including mutations in ARID1A. ARID1A is part of the SWI/SNF nucleosome remodeling complex that regulates DNA accessibility (“openness”). However, the contribution of ARID1A mutations to the development and the biology of FL remains unclear. Based on a functional screen, we investigated the link between ARID1A mutations and FAS/FASLG-induced apoptosis in FL.  We analyzed 151 diagnostic FL biopsies and found that ARID1A mutations were recurrent and mainly disruptive, with an overall frequency of 18%. Additionally, we observed that ARID1A mutant FL showed significantly lower FAS expression in the FL tumor cell population. Functional experiments in t(14;18)+ B lymphoma cells demonstrated that ARID1A is directly involved in the regulation of FAS, and ARID1A loss leads to decreased FAS protein and gene expression. However, ARID1A loss did not affect FAS promoter openness. Instead, we identified and experimentally validated a previously unknown co-transcriptional complex consisting of RUNX3 and ETS1 that regulates FAS expression, and ARID1A loss leads to reduced RUNX3 promotor openness and gene expression. The reduced FAS levels induced by ARID1A loss rendered lymphoma cells resistant to both soluble and T cell membrane-anchored FASLG-induced apoptosis. Furthermore, we observed an additional accumulation of ARID1A mutations in relapsed/refractory FL biopsies, indicating that we have identified a functionally and clinically relevant mechanism how FL cells can escape T cell mediated killing, which may also profoundly impact the efficacy of subsequent therapies, including CAR T cells.
DOI: 10.5281/zenodo.17231681
title: The complete gene annotation of Taohongling Sika deer (Cervus nippon kopschi)
DOI: 10.5281/zenodo.17231682
title: The complete gene annotation of Taohongling Sika deer (Cervus nippon kopschi)
DOI: 10.15468/dl.rstrkf
title: Occurrence Download

description: A dataset containing 7775 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Fossil",
 "TaxonKey is Pinus"
 ]
}

 The dataset includes 7775 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032418-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jgqwyk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mizuhopecten yessoensis",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032421-250920141307145/datasets/export for details.
DOI: 10.15468/dl.cxr7c6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mizuhopecten yessoensis",
 "Country is Morocco",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032422-250920141307145/datasets/export for details.
DOI: 10.15468/dl.tqkkrc
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mizuhopecten yessoensis",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032420-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25919/ghw7-tt20
title: NBDL Data Download
DOI: 10.25919/rqnz-zf97
title: NBDL Data Download
DOI: 10.15468/dl.84fx7a
title: Occurrence Download

description: A dataset containing 189147 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "SamplingProtocol is UVC",
 "SamplingProtocol is underwater visual census",
 "SamplingProtocol is visual census",
 "SamplingProtocol is scuba",
 "SamplingProtocol is SCUBA",
 "SamplingProtocol is dive survey",
 "SamplingProtocol is fish count",
 "SamplingProtocol is belt transect",
 "RecordedBy is UVC",
 "RecordedBy is underwater visual census",
 "RecordedBy is visual census",
 "RecordedBy is scuba",
 "RecordedBy is SCUBA",
 "RecordedBy is dive survey",
 "RecordedBy is fish count",
 "RecordedBy is belt transect"
 ]
 }
 ]
}

 The dataset includes 189147 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032367-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25919/9e2f-t417
title: NBDL Data Download
DOI: 10.6084/m9.figshare.29561897
title: CD24 is a promising immunotherapeutic target for enhancing efficacy of third-generation EGFR-TKIs on EGFR-mutated lung cancer

description: <b>Background</b>: Third-generation epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors (TKIs) show initial efficacy in EGFR-mutated lung cancer, but residual disease persists. This study aimed to investigate cluster of differentiation 24 (CD24) as a translational immunotherapeutic target for enhancing third-generation EGFR-TKI efficacy.<b>Methods</b>: We conducted RNA-sequencing (RNA-seq) on drug-responsive, -tolerant persister, and -resistant cells to identify therapeutic targets to pair with EGFR-TKIs. For validation, we integrated single-cell RNA-seq data from 29 lung cancer specimens and used single-nucleus RNA-seq and immunohistochemistry on clinical residual tumor samples following TKI therapy (TKI-residual). With CRISPR/Cas9, we studied the effect of CD24 on proliferation and phagocytic clearance during EGFR-TKI treatment. We tested CD24 knockout or ATG-031 (a first-in-class CD24 antibody) with EGFR-TKIs <i>in vitro</i>, xenografts, and spontaneous lung cancer models. To explore mechanisms, we used DNA affinity precipitation, chromatin immunoprecipitation sequencing, and luciferase assays to identify transcription factors regulating CD24. Co-immunoprecipitation combined with mass spectrometry and phosphoproteomics were used to study YIN-YANG-1 (YY1) S247 phosphorylation’s expression and function, while kinase inhibitors assessed upstream phosphorylation of YY1 S247 and its regulation of CD24.<b>Results</b>: CD24 expression rose in drug-responsive, -resistant, and -tolerant lung cancer cells and post-EGFR-TKI treatment clinical specimens. This elevation promoted cell proliferation and shielded tumor cells from macrophage-mediated phagocytosis. Genetic depletion of CD24 or treatment with ATG-031 significantly enhanced phagocytosis and tumor eradication in vitro, in xenografts, and in mice harboring EGFR<sup>L858R·T790M</sup>-driven spontaneous lung tumors. Furthermore, we revealed that YY1 S247 phosphorylation was responsible for the upregulation of CD24 upon EGFR-TKI treatment, facilitating YY1 dimerization and the formation of promoter-enhancer loops that regulate CD24 expression.<b>Conclusions</b>: CD24 is a promising target in EGFR-mutated lung cancers, potentially enhancing efficacy of third-generation EGFR-TKIs.
DOI: 10.6084/m9.figshare.29561897.v1
title: CD24 is a promising immunotherapeutic target for enhancing efficacy of third-generation EGFR-TKIs on EGFR-mutated lung cancer

description: <b>Background</b>: Third-generation epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors (TKIs) show initial efficacy in EGFR-mutated lung cancer, but residual disease persists. This study aimed to investigate cluster of differentiation 24 (CD24) as a translational immunotherapeutic target for enhancing third-generation EGFR-TKI efficacy.<b>Methods</b>: We conducted RNA-sequencing (RNA-seq) on drug-responsive, -tolerant persister, and -resistant cells to identify therapeutic targets to pair with EGFR-TKIs. For validation, we integrated single-cell RNA-seq data from 29 lung cancer specimens and used single-nucleus RNA-seq and immunohistochemistry on clinical residual tumor samples following TKI therapy (TKI-residual). With CRISPR/Cas9, we studied the effect of CD24 on proliferation and phagocytic clearance during EGFR-TKI treatment. We tested CD24 knockout or ATG-031 (a first-in-class CD24 antibody) with EGFR-TKIs <i>in vitro</i>, xenografts, and spontaneous lung cancer models. To explore mechanisms, we used DNA affinity precipitation, chromatin immunoprecipitation sequencing, and luciferase assays to identify transcription factors regulating CD24. Co-immunoprecipitation combined with mass spectrometry and phosphoproteomics were used to study YIN-YANG-1 (YY1) S247 phosphorylation’s expression and function, while kinase inhibitors assessed upstream phosphorylation of YY1 S247 and its regulation of CD24.<b>Results</b>: CD24 expression rose in drug-responsive, -resistant, and -tolerant lung cancer cells and post-EGFR-TKI treatment clinical specimens. This elevation promoted cell proliferation and shielded tumor cells from macrophage-mediated phagocytosis. Genetic depletion of CD24 or treatment with ATG-031 significantly enhanced phagocytosis and tumor eradication in vitro, in xenografts, and in mice harboring EGFR<sup>L858R·T790M</sup>-driven spontaneous lung tumors. Furthermore, we revealed that YY1 S247 phosphorylation was responsible for the upregulation of CD24 upon EGFR-TKI treatment, facilitating YY1 dimerization and the formation of promoter-enhancer loops that regulate CD24 expression.<b>Conclusions</b>: CD24 is a promising target in EGFR-mutated lung cancers, potentially enhancing efficacy of third-generation EGFR-TKIs.
DOI: 10.15468/dl.mbw3xa
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material sample, Human Observation, Material citation, Occurrence evidence)",
 "Country is one of (Pakistan, Bangladesh, Bhutan, India, Maldives, Nepal, Afghanistan, Sri Lanka)",
 "OccurrenceStatus is Present",
 "TaxonKey is Hodotermitidae"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032419-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mjbzn
title: Occurrence Download

description: A dataset containing 1405 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((100.70362 18.68629,157.29638 18.68629,157.29638 41.31371,100.70362 41.31371,100.70362 18.68629))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lymantria xylina"
 ]
}

 The dataset includes 1405 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032425-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwq45h
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haliotis discus",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032426-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hh226b
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haliotis discus",
 "Country is Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032427-250920141307145/datasets/export for details.
DOI: 10.5281/zenodo.17231747
title: Raw and Processed Grip Force Data for Skiing Experiment

description: This dataset supports the study of grip force measurement on ski poles, focusing on the characteristic pressure distribution patterns generated during skiing. To address the challenges of acquiring accurate grip force data on the curved surfaces of ski poles, a multi-point flexible array sensor system was used to collect force measurements at key contact points.
DOI: 10.5281/zenodo.17231748
title: Raw and Processed Grip Force Data for Skiing Experiment

description: This dataset supports the study of grip force measurement on ski poles, focusing on the characteristic pressure distribution patterns generated during skiing. To address the challenges of acquiring accurate grip force data on the curved surfaces of ski poles, a multi-point flexible array sensor system was used to collect force measurements at key contact points.
DOI: 10.15468/dl.d76pm7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haliotis discus",
 "Country is Israel",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032428-250920141307145/datasets/export for details.
DOI: 10.5281/zenodo.17231106
title: EarthMiss: A Remote Sensing Land-Cover Dataset for Missing Modality Learning
DOI: 10.5281/zenodo.17231107
title: EarthMiss: A Remote Sensing Land-Cover Dataset for Missing Modality Learning