cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17213211.v1
title: Taxonomic implications of recent molecular analyses of Spectacled (<i>Symposiachrus trivirgatus</i>) and Spot-winged (<i>S. guttula</i>) Monarchs (Passeriformes: Monarchidae)

description: Genomic approaches to phylogeography routinely reveal that our estimates of species level diversity within island systems are woefully underappreciated. A recent analysis of population genetics, phylogeography and historical demography of two pied monarchs (Monarchidae), the Spectacled (<i>Symposiachrus trivirgatus</i>) and Spot-winged Monarchs (<i>S. guttula</i>), uncovered unexpected instances of paraphyly and genetic diversity. Here, we discuss the taxonomic implications for these species complexes and recommend recognising three species within what has been considered <i>S. trivirgatu</i>s. We defer the naming of a genetically distinct and admixed population of <i>S. guttula</i> on Gag Island, Indonesia, and, pending further study, we advocate continued recognition of this species as monotypic. This study highlights cryptic diversity in the Indo-Pacific species complex and the need for thoroughly sampled phylogenomic datasets to reconcile taxonomy with the complex evolutionary history of birds in this region.
DOI: 10.5525/gla.researchdata.1234
title: Noise rejection through an improved quantum illumination protocol

description: Data to generate images and assess image metrics as described and presented in Figure 2 of Scientific Reports 11 Article number: 21841 (2021)
DOI: 10.5517/ccdc.csd.cc241r10
title: CCDC 1967881: Experimental Crystal Structure Determination

description: Related Article: Yating Wen, Shengbing Xiao, Haichao Liu, Xuzhou Tian, Jianbo De, Tong Lu, Zhiqiang Yang, Deyue Zou, Ying Lv, Shi-Tong Zhang, Qing Su, Bing Yang|2021|J.Mater.Chem.C|9|17511|doi:10.1039/D1TC02265B
DOI: 10.5281/zenodo.5786374
title: Dataset - paper: Are food parenting practices gendered?

description: Dataset corresponding to a paper that has been published in Appetite (Philippe K, Chabanet C, Issanchou S, Monnery-Patris S. <em>Are food parenting practices gendered? Impact of mothers' and fathers' practices on their child's eating behaviors</em>. Appetite. 2021 Nov 1;166:105433. doi: <strong>10.1016/j.appet.2021.105433</strong>. Epub 2021 Jun 1. PMID: 34087257). The objectives of the study were (1) to identify possible gender differences regarding parental feeding practices and styles and parental perceptions of the child’s eating behaviours, and (2) to assess the associations between maternal and paternal feeding practices and styles and child eating behaviours, and to study possible effects of concordant/discordant feeding practices in families. Information about the dataset and the corresponding documents can be found in the document "Metadata-paper-couples.docx".
description: {"references": ["Philippe K, Chabanet C, Issanchou S, Monnery-Patris S. Are food parenting practices gendered? Impact of mothers' and fathers' practices on their child's eating behaviors. Appetite. 2021 Nov 1;166:105433. doi: 10.1016/j.appet.2021.105433. Epub 2021 Jun 1. PMID: 34087257."]}
DOI: 10.5281/zenodo.5786373
title: Dataset - paper: Are food parenting practices gendered?

description: Dataset corresponding to a paper that has been published in Appetite (Philippe K, Chabanet C, Issanchou S, Monnery-Patris S. <em>Are food parenting practices gendered? Impact of mothers' and fathers' practices on their child's eating behaviors</em>. Appetite. 2021 Nov 1;166:105433. doi: <strong>10.1016/j.appet.2021.105433</strong>. Epub 2021 Jun 1. PMID: 34087257). The objectives of the study were (1) to identify possible gender differences regarding parental feeding practices and styles and parental perceptions of the child’s eating behaviours, and (2) to assess the associations between maternal and paternal feeding practices and styles and child eating behaviours, and to study possible effects of concordant/discordant feeding practices in families. Information about the dataset and the corresponding documents can be found in the document "Metadata-paper-couples.docx".
description: {"references": ["Philippe K, Chabanet C, Issanchou S, Monnery-Patris S. Are food parenting practices gendered? Impact of mothers' and fathers' practices on their child's eating behaviors. Appetite. 2021 Nov 1;166:105433. doi: 10.1016/j.appet.2021.105433. Epub 2021 Jun 1. PMID: 34087257."]}
DOI: 10.5517/ccdc.csd.cc254rjm
title: CCDC 2000570: Experimental Crystal Structure Determination

description: Related Article: Avijit Maiti, Sebastian Sobottka, Shubhadeep Chandra, Debayan Jana, Prince Ravat, Biprajit Sarkar, Anukul Jana|2021|J.Org.Chem.|86|16464|doi:10.1021/acs.joc.1c01827
DOI: 10.5517/ccdc.csd.cc254rkn
title: CCDC 2000571: Experimental Crystal Structure Determination

description: Related Article: Avijit Maiti, Sebastian Sobottka, Shubhadeep Chandra, Debayan Jana, Prince Ravat, Biprajit Sarkar, Anukul Jana|2021|J.Org.Chem.|86|16464|doi:10.1021/acs.joc.1c01827
DOI: 10.5517/ccdc.csd.cc254rlp
title: CCDC 2000572: Experimental Crystal Structure Determination

description: Related Article: Avijit Maiti, Sebastian Sobottka, Shubhadeep Chandra, Debayan Jana, Prince Ravat, Biprajit Sarkar, Anukul Jana|2021|J.Org.Chem.|86|16464|doi:10.1021/acs.joc.1c01827
DOI: 10.5517/ccdc.csd.cc254rmq
title: CCDC 2000573: Experimental Crystal Structure Determination

description: Related Article: Avijit Maiti, Sebastian Sobottka, Shubhadeep Chandra, Debayan Jana, Prince Ravat, Biprajit Sarkar, Anukul Jana|2021|J.Org.Chem.|86|16464|doi:10.1021/acs.joc.1c01827
DOI: 10.5281/zenodo.5786378
title: SUPPLEMENTARY TABLES: Defining the Sphagnum core microbiome across the North American continent reveals a central role for diazotrophic-methanotrophs in the nitrogen and carbon cycles of boreal peatland ecosystems

description: Peat mosses of the genus <em>Sphagnum</em> are ecosystem engineers that frequently predominate over photosynthetic production in boreal peatlands. <em>Sphagnum</em> spp. host diverse microbial communities capable of nitrogen-fixation (diazotrophy) and methane oxidation (methanotrophy), thereby potentially supporting plant growth under severely nutrient-limited conditions. Moreover, diazotrophic-methanotrophs represent a possible "missing link" between the carbon and nitrogen cycles, but the functional contributions of the <em>Sphagnum</em>-associated microbiome remain in question<em>.</em> A combination of metagenomics, metatranscriptomics, and dual-isotope incorporation assays was applied to investigate <em>Sphagnum</em> microbiome community composition across the North American continent and provide empirical evidence for diazotrophic-methanotrophy in <em>Sphagnum</em>-dominated ecosystems. Remarkably consistent prokaryotic communities were detected in over 250 <em>Sphagnum</em> SSU rRNA libraries from peatlands across the US (5 states, 17 bog/fen sites, 18 <em>Sphagnum</em> species), with twelve genera of the core microbiome comprising 60% of the relative microbial abundance. Additionally, nitrogenase (<em>nifH</em>) and SSU rRNA gene amplicon analysis revealed that nitrogen-fixing populations made up nearly 15% of the prokaryotic communities, predominated by <em>Nostocales</em> cyanobacteria and <em>Rhizobiales</em> methanotrophs. While cyanobacteria comprised the vast majority (&gt;95%) of diazotrophs detected in amplicon and metagenome analyses, obligate methanotrophs of the genus <em>Methyloferula</em> (order <em>Rhizobiales</em>) accounted for one-quarter of transcribed <em>nifH</em> genes. Furthermore, in dual-isotope tracer experiments, members of the <em>Rhizobiales</em> showed substantial incorporation of <sup>13</sup>C-CH<sub>4</sub> and <sup>15</sup>N-N<sub>2</sub> isotopes into their rRNA. Our study characterizes the core <em>Sphagnum</em> microbiome across large spatial scales and indicates that diazotrophic methanotrophs, here defined as obligate methanotrophs of the rare biosphere (<em>Methyloferula</em> spp. of the <em>Rhizobiales</em>) that also carry out diazotrophy, play a keystone role in coupling of the carbon and nitrogen cycles in nutrient-poor peatlands.
DOI: 10.5281/zenodo.5786377
title: SUPPLEMENTARY TABLES: Defining the Sphagnum core microbiome across the North American continent reveals a central role for diazotrophic-methanotrophs in the nitrogen and carbon cycles of boreal peatland ecosystems

description: Peat mosses of the genus <em>Sphagnum</em> are ecosystem engineers that frequently predominate over photosynthetic production in boreal peatlands. <em>Sphagnum</em> spp. host diverse microbial communities capable of nitrogen-fixation (diazotrophy) and methane oxidation (methanotrophy), thereby potentially supporting plant growth under severely nutrient-limited conditions. Moreover, diazotrophic-methanotrophs represent a possible "missing link" between the carbon and nitrogen cycles, but the functional contributions of the <em>Sphagnum</em>-associated microbiome remain in question<em>.</em> A combination of metagenomics, metatranscriptomics, and dual-isotope incorporation assays was applied to investigate <em>Sphagnum</em> microbiome community composition across the North American continent and provide empirical evidence for diazotrophic-methanotrophy in <em>Sphagnum</em>-dominated ecosystems. Remarkably consistent prokaryotic communities were detected in over 250 <em>Sphagnum</em> SSU rRNA libraries from peatlands across the US (5 states, 17 bog/fen sites, 18 <em>Sphagnum</em> species), with twelve genera of the core microbiome comprising 60% of the relative microbial abundance. Additionally, nitrogenase (<em>nifH</em>) and SSU rRNA gene amplicon analysis revealed that nitrogen-fixing populations made up nearly 15% of the prokaryotic communities, predominated by <em>Nostocales</em> cyanobacteria and <em>Rhizobiales</em> methanotrophs. While cyanobacteria comprised the vast majority (&gt;95%) of diazotrophs detected in amplicon and metagenome analyses, obligate methanotrophs of the genus <em>Methyloferula</em> (order <em>Rhizobiales</em>) accounted for one-quarter of transcribed <em>nifH</em> genes. Furthermore, in dual-isotope tracer experiments, members of the <em>Rhizobiales</em> showed substantial incorporation of <sup>13</sup>C-CH<sub>4</sub> and <sup>15</sup>N-N<sub>2</sub> isotopes into their rRNA. Our study characterizes the core <em>Sphagnum</em> microbiome across large spatial scales and indicates that diazotrophic methanotrophs, here defined as obligate methanotrophs of the rare biosphere (<em>Methyloferula</em> spp. of the <em>Rhizobiales</em>) that also carry out diazotrophy, play a keystone role in coupling of the carbon and nitrogen cycles in nutrient-poor peatlands.
DOI: 10.5517/ccdc.csd.cc241r21
title: CCDC 1967882: Experimental Crystal Structure Determination

description: Related Article: Yating Wen, Shengbing Xiao, Haichao Liu, Xuzhou Tian, Jianbo De, Tong Lu, Zhiqiang Yang, Deyue Zou, Ying Lv, Shi-Tong Zhang, Qing Su, Bing Yang|2021|J.Mater.Chem.C|9|17511|doi:10.1039/D1TC02265B
DOI: 10.5517/ccdc.csd.cc27wyfj
title: CCDC 2082438: Experimental Crystal Structure Determination

description: Related Article: Dmitry N. Platonov, Dmitry N. Kholodkov, Irina K. Goncharova, Maria A. Belaya, Yaroslav V. Tkachev, Pavel V. Dorovatovskii, Alexander D. Volodin, Alexander A. Korlyukov, Yury V. Tomilov, Ashot V. Arzumanyan, Roman A. Novikov|2021|Organometallics|40|3876|doi:10.1021/acs.organomet.1c00291
DOI: 10.5255/ukda-sn-855333
title: COVID-19: Identifying Effective Remote Literacy Teaching Methods for Primary-aged Children, 2020-2021

description: A total of 212 8-12-year old English-educated children took part. 106 children received online one-to-one teaching in two 4-week cycles of live delivery (synchronous) vs. offline task-discussion delivery (asynchronous) over the course of the summer term. Within each cycle, each child received 2 hours of tuition per week in either synchronous or asynchronous delivery (53 children initially follow synchronous, 53 initially follow asynchronous; rotated for the second cycle). Synchronous delivery entails live interaction between the pupil and the teacher; asynchronous entails offline work by the pupil which is then discussed by pupil and teacher. Lesson content followed the structure and content of seminal intervention research studies targeting word-level literacy skills. Parity of the content and structure was ensured across Cycle 1 and 2 methods. Each lesson comprised several short-activities, tailored in part to each child’s individual needs, based on pre-test assessments. Teaching was conducted by teachers from the Miles Dyslexia Centre. All participating teachers received programme delivery training online by the investigators and project partners. We tracked literacy and language skills throughout the project using a battery of standardised measures, which were administered T1 (prior to the programme), T2 (midway through the programme) and T3 (at the end of the programme). We also collected key demographic data on all children.
DOI: 10.15472/2oqk4i
title: Entomofauna de San Andrés y Providencia recopilada a partir de literatura - Expedición Sea Flower Plus 2021

description: Se presenta información sobre la entomofauna asociada al ambiente terrestre del Archipiélago de San Andrés, Providencia y Santa Catalina, con base en publicaciones de acceso libre. En total, se incluyen en la lista 4 ordenes, 16 familias, 46 géneros, 44 especies y 9 subespecies de la clase Insecta. Las especies y subespecies no están incluidas en ninguna categoría de riesgo o endemismo, ni se ha documentado su valor cultural o uso.
DOI: 10.15468/vgknen
title: Review of the genus Taurotettix Haupt, 1929 (Homoptera: Cicadellidae: Deltocephalinae: Cicadulini): morphology, acoustic signals, and geographical variability

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tishechkin, Dmitri Yu. (2021): Review of the genus Taurotettix Haupt, 1929 (Homoptera: Cicadellidae: Deltocephalinae: Cicadulini): morphology, acoustic signals, and geographical variability. Zootaxa 5082 (2): 191-199, DOI: https://doi.org/10.11646/zootaxa.5082.2.9
DOI: 10.5255/ukda-sn-855340
title: A Smart System to Empower Healthy Food Choices - Machine Learning Component, 2020-2021

description: Dataset and associated material used for the machine learning analysis of food choices. The dataset was obtained from an experiment with 154 participants who made 30 choices of the healthiest food within a choice array of 6 options, given nutritional label data. This is a secondary data analysis and the original data collection was not funded by the grant. The dataset contains 4260 observations (response trials) and 51 variables.
DOI: 10.5281/zenodo.5562630
title: The Piraeus AIS Dataset for Large-scale Maritime Data Analytics

description: AIS data collected from the receiver at the University of Pireaus
DOI: 10.15468/54qpfg
title: New species of Triplocania Roesler (Psocodea: ‘ Psocoptera’: Ptiloneuridae) from Colombia and Peru

description: This dataset contains the digitized treatments in Plazi based on the original journal article González-Obando, Ranulfo, Carrejo-Gironza, Nancy, García, Alfonso N. (2021): New species of Triplocania Roesler (Psocodea: ‘ Psocoptera’: Ptiloneuridae) from Colombia and Peru. Zootaxa 5080 (1): 1-63, DOI: https://doi.org/10.11646/zootaxa.5080.1.1
DOI: 10.5281/zenodo.6885109
title: Inputs and results of "A quantitative and qualitative citation analysis to retracted articles in the humanities domain"

description: This repository contains the datasets and visualizations generated in our work: <strong>"A quantitative and qualitative citation analysis to retracted articles in the humanities domain"</strong>. <strong>Note:</strong> the data are all contained inside the <strong><em>data.zip</em> </strong>file. You need to unzip the container to get access to all the files and directories listed below. The data (citations) gathered accompanied by their annotated characteristics are stored in <strong><em>data/</em>:</strong> <em>cits.csv: </em>a dataset containing all the entities (rows in the CSV) which have cited a retracted article in the humanities domain. Each citing entity (row) is accompanied by a set of features (columns) that characterizes it.<br> <strong>Note: </strong>this dataset is licensed under a Creative Commons public domain dedication (CC0). <em>content.csv: </em>a dataset containing the abstracts and the in-text citation contexts of all the citing entities gathered.<br> <strong>Note: </strong>the data keep their original license (the one provided by their publisher). This dataset is provided in order to favor the reproducibility of the results obtained in our work. <em>excluded_hum_retractions.csv: </em>a list of the 12 humanities retracted articles with a humanities affinity score &lt; 2, therefore excluded from the analysis. <strong>Topic modeling</strong> We run a topic modeling analysis on the textual features gathered (i.e. abstracts and citation contexts). The results are stored inside the <em><strong>topic_model/</strong></em> directory. The topic modeling has been done using MITAO, a tool for mashing up automatic text analysis tools and creating a completely customizable visual workflow [1]. The directory <em><strong>workflow/ </strong></em>contains the workflows used in MITAO. The topic modeling results for each textual feature are separated into two different folders, <em><strong>abstract/</strong></em> for the abstracts, and <em><strong>cits_context/</strong></em> for the in-text citation contexts. Both the directories contain the following directories/files: <em><strong>datasets_and_views/: </strong></em>the datasets and visualizations generated using MITAO. <em><strong>ldamodel_corpus_dict/: </strong></em>it contains the dictionary, the LDA topic model, and the tokenized and vectorized corpus. <em><strong>rawdata/: </strong></em>the textual collection, metadata, and stopwords used as input in the workflow of MITAO <strong>References</strong> [1] Ferri, P., Heibi, I., Pareschi, L., & Peroni, S. (2020). MITAO: A User Friendly and Modular Software for Topic Modelling [JD]. PuntOorg International Journal, 5(2), 135–149. https://doi.org/10.19245/25.05.pij.5.2.3
DOI: 10.34740/kaggle/dsv/3974224
title: Team Fight Tactics matches
DOI: 10.3886/e174948v3
title: Special Education Eligibility Criteria and Professional Certification Requirements in the United States Related to Students with Visual Impairments and Deafblindness

description: The Individuals with Disabilities Education Act (IDEA, 2004) established federal definitions for 14 disability categories under which students may be found eligible for special education services in the United States. Although states must abide by this federal law that broadly defines each disability category, states may also develop their own unique definitions and eligibility criteria to identify students. In addition, states have flexibility in determining the requirements for professional licensure for the educators and professionals who work with students with disabilities. <br><br>For this project, we reviewed state regulatory and policy documents to explore the variability in eligibility requirements for students with sensory impairments (i.e., visual impairment, including blindness; hearing impairment; deafness; deafblindness) and licensure requirements for professionals who work with students with visual impairments, teachers of the visually impaired (TVIs) and orientation & mobility (O&M) specialists across the US. Specifically, these data represent a state-by-state (including Washington DC and US territories (American Samoa, Guam, Northern Mariana Islands, Puerto Rico, and the US Virgin Islands)) snapshot of variability in eligibility and licensure requirements. <br><br>Data for this project were collected between January and October 2021. At the time data were collected, measures were taken to ensure reliability (i.e., high inter-rater agreement across states and variables). However, changes in state regulations or policy documents may impact the accuracy of the data at the time of download. Individuals using this data set to locate information for a specific state should consult the state’s most up-to-date documents. <br><br><br>
description: Students with visual impairments; Students with Deafblindness; Teachers of Students with Visual Impairments; Orientation and Mobility Specialists<br>.
DOI: 10.6084/m9.figshare.19074176
title: The Intestine is a Major Contributor to Circulating Succinate in Mice

description: The repository contains raw metabolomic data used for analyses related to the measurement of TCA cycle metabolite production from mouse intestine including the natural isotopomer abundance matrix used to normalize data in experiments using U-C13-Fructose gavage.
DOI: 10.6084/m9.figshare.19074176.v2
title: The Intestine is a Major Contributor to Circulating Succinate in Mice

description: The repository contains raw metabolomic data used for analyses related to the measurement of TCA cycle metabolite production from mouse intestine including the natural isotopomer abundance matrix used to normalize data in experiments using U-C13-Fructose gavage.
DOI: 10.6084/m9.figshare.19074176.v1
title: The Intestine is a Major Contributor to Circulating TCA Cycle Intermediates in Mice

description: The repository contains raw metabolomic data used for analyses related to the measurement of TCA cycle metabolite production from mouse intestine including the natural isotopomer abundance matrix used to normalize data in experiments using U-C13-Fructose gavage.
DOI: 10.6084/m9.figshare.19650835
title: Impact of the naloxone standing order on trends in opioid fatal overdose: an ecological analysis

description: <i>Background:</i> Maryland expanded its “Statewide Naloxone Standing Order” (NSO) in 2017 to eliminate training and prescription requirements for obtaining naloxone, improve naloxone access, help reverse opioid overdose, and reduce overdose fatality rates. <i>Objectives:</i> To assess the change in the trends of fatal opioid overdose rates following the expansion of the Naloxone Standing Order (eNSO) and its association with the social determinants of health (SDoH). <i>Methods:</i> Data on overdose deaths and SDoH from 2015–2019 was collected and analyzed using interrupted time series and multivariate Poisson regression models to study the change in trends and the associations. <i>Results:</i> There was a significant decrease in the rate of fatal overdoses after the intervention: prescription opioid estimate number of deaths declined by .25 per 100,000 (<i>p</i> = .02), heroin estimate number of deaths declined by 1.83 per 100,000 (<i>p</i> &lt; .001), fentanyl estimate number of deaths declined by 2.54 per 100,000 (<i>p</i> &lt; .001). After controlling for eNOS implementation in Maryland, state-level estimates with high proportions of female residents and those with bachelor’s degree or higher were associated with reduction in overdose, while state-level estimates with high proportions of African Americans and higher employment rates were associated with an increase in overdose. <i>Conclusions:</i> Our analysis shows that the expanded naloxone standing order is associated with reducing opioid-related overdose death rates. Even though we observed a significant reduction in overdose death rate in fentanyl-related deaths, the rate of deaths post-eNSO was still increasing, suggesting the need for additional measures to impact the rates of fentanyl.