cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/37n4ztp9v6
title: Data for: Density Functional Study on Hybrid h-BN/Graphene Atomic Chains

description: Average bond lengths observed between atoms of hybrid atomic chains and in DOS due to applying stress a) along y axis of 6-BNNR, b) along z axis of 6-BNNR, c) along y axis of 14-GRNR, d) along z axis of 14-GRNR.
DOI: 10.6084/m9.figshare.11434965.v1
title: Double-balloon enteroscopy for retrieving retained small-bowel video capsule endoscopes: a systematic review

description: <b>Background and aim:</b> Capsule retention is the most common adverse event associated with video capsule endoscopy. The use of double-balloon enteroscopy-assisted capsule endoscope retrieval has been increasingly reported in recent years. However, evidence is limited regarding its success rate, associated factors, and subsequent clinical outcomes. <b>Methods:</b> A systematic review of relevant studies published before January 2019 was performed. Successful retrieval rate and associated factors, rate of endoscopic balloon dilation, and outcomes after double-balloon enteroscopy were summarized and pooled. <b>Results:</b> Within 154 associated original articles, 12 including 150 cases of capsule retrieval by double-balloon enteroscopy were included. The estimated pooled successful retrieval rate was 86.5% (95% confidence interval, 75.6–95.1%). Anterograde approach and capsules retained in the jejunum or trapped by malignant strictures were associated with a higher successful retrieval rate than the retrograde approach (62/83 [74.7%] vs. 10/38 [26.3%], <i>p</i> p p = .043). Endoscopic balloon dilation was performed in 38.8% (95% confidence interval, 22.3–56.3%) of patients with benign strictures. Two perforations (1.3%) were reported as severe adverse events after double-balloon enteroscopy. A significantly lower surgery rate was found among cases with successful video capsule removal compared with unsuccessful cases (7.2% vs. 38.5%, <i>p</i> = .002). <b>Conclusions:</b> Double-balloon enteroscopy is feasible and safe for removing retained video capsule endoscopes, and its use could decrease the need for surgery in patients with benign strictures and facilitate subsequent surgery in patients with malignant strictures.
DOI: 10.6084/m9.figshare.8168723.v2
title: Gellman et al kinematic data from Swimming from coast to coast: a novel fixed-gear swimming gait in fish.

description: Kinematic data from bluegill sunfish volitional swimming. Gellman ED, Tandler TR, Ellerby DJ, Swimming from coast to coast: a novel fixed-gear swimming gait in fish, Biology Letters
DOI: 10.17632/4wzgyxzhpv
title: 15N [0013] TROSY-/anti-TROSY-CPMG

description: Example datasets for 15N [0013] TROSY-/anti-TROSY-CPMG experiments (Journal of Magnetic Resonance, 361 (2024) 107629. DOI: 10.1016/j.jmr.2024.107629).
DOI: 10.17632/pzn5866378
title: Neurologistics Simulation Code: Neuro-Inspired Forecasting of Ethical Decision-Making in Sustainable Supply Chains

description: This dataset contains the full Python codebase used in the study "Neurologistics: A Neuro-Inspired Simulation for Forecasting Ethical Decision-Making in Sustainable Supply Chains." The Neurologistics framework models how biologically inspired cognitive traits—empathy, stress tolerance, and impulse control—influence ethical trade-offs in logistics operations under pressure from emerging technologies (e.g., AI optimization, autonomous delivery, ESG dashboards).
The simulation produces 15,000 agent-based decisions across three ethical scenarios: speed vs. emissions, cost vs. labor rights, and efficiency vs. sustainability. It includes modules for simulation execution, econometric analysis, structural equation modeling, robustness checks, and visualizations. Several files simulate learning mechanisms and compare agent behavior across time, enabling the study of ethical adaptation.
The code supports generating figures in the manuscript and allows replication of all reported findings.
DOI: 10.17632/hzffcrtv3r
title: Chapter 25：Turbulent structures of gravity currents propagating over a rough-permeable bed

description: AGU book Chapter 25
DOI: 10.17632/n2f48fyynb
title: DEFORM SUBROUTINE

description: Deform subroutine
DOI: 10.17632/88rjtx7ypp
title: The Probabilistic Land Use/Land Cover Suitability

description: The Probabilistic Land Use/Land Cover Suitability Assessment Using ECOC-SVM
DOI: 10.6084/m9.figshare.13439894.v6
title: FLACK: Counterexample-Guided Fault Localization for Alloy Models

description: Replication package for FLACK in ICSE21. All usage and instructions are in the README.md.<br>
DOI: 10.6084/m9.figshare.25341754.v1
title: Annotated Assembled Genomes - Georgia, USA

description: The draft genomes of antibiotic-resistant bacteria isolated from imported fresh produce in Georgia, USA.
DOI: 10.17632/5pzd2rg5ys
title: Raw DNA Methylation Data; Mosella et al., 2021 

description: Raw cfDNA methylation intensity data files (IDAT) for 29 tumor tissue collections from pituitary neuroendocrine tumors (PitNETs) and other non-tumorous conditions.
DOI: 10.17632/thr53wx9y6
title: Supplementary Figure and Tables for "Association of antinuclear antibodies and malignancy in scleroderma patients: A systematic review and meta-analysis"

description: Supplementary Figure and Tables for the article "Association of antinuclear antibodies and malignancy in scleroderma patients: A systematic review and meta-analysis," published in JAAD Reviews.
DOI: 10.6084/m9.figshare.6236477.v1
title: Supplementary Material for: Transcriptome Profile Analysis of Mechanisms of Black and White Plumage Determination in Black-Bone Chicken

description: <b><i>Background/Aims:</i></b> Melanin is a major and ubiquitous component of plumage colouration, and patterns of melanin pigmentation in birds are extremely varied. However, the molecular mechanism of pigmentation in avian plumage is still largely unknown. <b><i>Methods:</i></b> To elucidate the molecular mechanisms involved in the formation of black and white plumage, this study takes advantage of high-throughput sequencing technology to compare differences in the transcriptome between black and white chicken feather bulbs. In total, we constructed six cDNA libraries from black (Group B) and white (Group W) feather bulbs in the dorsal plumage of Muchuan black-boned chickens. <b><i>Results:</i></b> A comparison between Groups B and W revealed 61 differentially expressed genes, with 47 displaying higher, and 14 displaying lower, levels of expression in white feather bulbs. Our results revealed a set of candidate genes and two potential metabolic pathways involved in black-bone chicken plumage melanogenesis. These include four homeobox genes (HOXB9, HOXC8, HOXA9, and HOXC 9), two glutathione (GSH) metabolism-related genes (CHAC1 and GPX3), and the transforming growth factor beta (TGF-β) signalling pathway. Two known genes, TYR and MITF, were also shown to play a role in melanin formation. <b><i>Conclusion:</i></b> our data provide a valuable resource for discovering genes important in plumage melanin formation and will help further elucidate the molecular mechanisms for black and white plumage.
DOI: 10.6084/m9.figshare.8241410.v5
title: SH transcriptome-supplementary files .xlsx

description: After the quality control of the original transcriptomic data, we used Bowtie2 to compare clean reads to the reference gene sequence , and then RSEM<sup> </sup> was used to calculate the expression levels of genes and transcripts. The results in the table S1 showed that most genes in <i>P. aeruginosa</i> were expressed under both conditions. In order to reflect the correlation of gene expression between samples, Pearson correlation coefficients of all gene expression amounts between every samples were calculated, and then expression amount distribution analysis were performed. The obtained results are shown in Fig. S1A below. According to the gene expression level of each sample, a total of 2047 differentially expressed genes were detected by the threshold of fold changes&gt;2, Q value&lt;0.001, of which 368 genes were up-regulated and 1679 genes were down-regulated. The quantity of down regulated genes are significantly larger than the up-regulated genes. The results are shown in volcanic map of Fig. S1B.
DOI: 10.17632/wbxrhsxf97
title: Data for 'The influence of porosity and alloying elements on tungsten-based composites thermal conductivity'

description: The Raw data files for SEM, XRD, and some properties of the W-based composites
DOI: 10.17632/46y2fpbfjj
title: LINF_140012200

description: Ketoacyl-CoA synthase | Fatty acid elongase | ELO-1; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.17019065.v1
title: Source Data for Chen et al. Communications Biology

description: Source data for Fig. 3g, 5c, and 5f.
DOI: 10.6084/m9.figshare.3558441.v1
title: Appendix I. Detailed effects of flow on rarity.

description: Detailed effects of flow on rarity.
DOI: 10.17632/czm9tbjz7g
title: Development of a risk prediction model for early discrimination between permanent and transient congenital hypothyroidism

description: The aim of this study was to develop and evaluate a risk prediction model for clinicians based on clinical and biochemical characteristics of neonates with CH, applicable for the early discrimination between transient and permanent CH up to the one year old.
DOI: 10.6084/m9.figshare.5048623.v1
title: Official Information Act (NZ) Request Totals. 1990-2016

description: Recorded official information request totals from selected New Zealand government agencies. Earliest date is for 1990 and latest for 2016 (years ending June 30).<br>2016 totals from State Services Commission survey and older data from a 2001 thesis survey<br>
DOI: 10.17632/6vsbk97scn
title: Whittington, King, and Cingolani 2022

description: This dataset includes author-level metrics for over 1.2 anonymized author profiles which have been used for the analysis proposed in our article titled "Structure, Status, and Span: Global Gender Differences in Disciplinary Authorship Networks Across a Global Landscape". The set of metrics are meant to measure the structure, status and span of the collaborative research activity of women and men authors active in four regions and four fields during the period 2009-2013.
DOI: 10.17632/jvpp9ptyhj
title: A study of gut microbiota associated with acute lung injury in infants with congenital heart disease after cardiopulmonary bypass

description: We conducted 16S rRNA sequencing to analyze the characteristics of the intestinal microbiota in healthy controls and infants with CHD admitted to the hospital. The CHD infants were divided into CPB-ALI and non-ALI (CPB-NALI) groups based on postoperative outcomes. Bacterial functional pathway prediction analysis was performed using PIRCUSt2, and the gut microbiota composition associated with immune status was determined with heatmap. Random forest regression models and ROC curves were utilized to predict the occurrence of CPB-ALI.Our study revealed significantly different microbiota compositions among three groups. The microbiota diversity was low in the CPB-ALI group with high pathogen abundance and significant decrease in Bacteroides, while the opposite was observed in the CPB-NALI group. The microbiota dysbiosis index was high in the CPB-ALI group, with its dominant microbiota significantly associated with multiple metabolic pathways. Additionally, CPB-ALI patients showed high levels of inflammatory cytokines IL-8 and HMGB1 in their serum, with high expression of IL-8 being associated with Enterobacteriaceae. Further correlation analysis showed that the differences in gut bacterial taxonomy were related to the occurrence of ALI, length of stay in the cardiac care unit, and ventilation time. Escherichia Shigella performed best in distinguishing CPB-ALI patients from non-ALI patients.
DOI: 10.17632/5cyzzdxfm8
title: Dataset for small cities

description: This dataset comprises single-county urbanized areas from the U.S. Census Bureau for the decades 1970-2010. It also contains agricultural land values from the U.S. Department of Agriculture. We used this data to test the hypothesis that small cities are affected differently than large cities by the factors identified by the Mills-Muth model as explaining city size. This dataset includes: urbanized area name, land area, population, median household income, agricultural land values, the percent of commuters using public transit, the percent of households with at least one vehicle available, and the year. 1970 data is from the 1972 county and city data book. 1980, 1990, and 2000 data is from the Decennial Censuses. 2010 data is from the American Community Survey 5-year estimates.
DOI: 10.17632/m92z398z9m
title: Restricted, Repetitive, and Stereotypical Patterns of Behavior in Autism – an fMRI Perspective

description: See file 'Raw Data Description.pdf'.
DOI: 10.17632/fgcy5tvw9d
title: Published Journal of Studies in Islam and Psychology; No. 29

description: The journal is set to publish original articles on a wide range of issues including;

 The philosophy of psychology with a critical outlook from the perspective of Islam;
 The uses of psychology in the service of the Islamic society and its needs;
 The formation of psychology in the Islamic society;
 Psychological analysis of Islamic concepts in areas such as:
 1. Anthropology, such as: banned, impatience, hasty, captious, pious, faithful;
 2. Belief, such as: God, resurrection, Imamate, intercession, Paradise, Hell and ...;
 3. Value, such as: repentance, trust, self-esteem, mental relaxation, grief, fear;
 4. Practical instructions of Islam, such as: qisas (retaliation), prayers, inheritance, hajj, khums (one fifth);
 Study of psychological findings from Islamic perspective in terms of critique, confirmation and completion, alternative presentation, presentation of new theory;
DOI: 10.17632/6w88xmcv9m
title: Third-Party Intervention in 3-5-Year-Old Children: The Role of Unfair Perception and Cognitive Empathy

description: This study investigated the third-party intervention behavior of 3-5-year-old children and the roles of unfair perception and cognitive empathy. In Experiment 1, third-party punishment and third-party compensation tasks were employed, revealing that when faced with unfair distribution, children tended to choose third-party compensation, and the degree of compensation was significantly higher than the intensity of punishment. Experiment 2 further discovered that under different resource relationship conditions, higher levels of unfair perception could promote children's third-party intervention. Age was found to facilitate children's intervention in unfair distributions and inhibit their intervention in fair distributions. In Experiment 3, children were randomly assigned to the cognitive empathy group and the control group. The results showed that cognitive empathy promoted children with a poor resource preference to choose third-party punishment. This study provides evidence from a developmental perspective on the impact mechanisms of unfair perception and cognitive empathy on third-party intervention behavior. It emphasizes the role of third-party intervention in maintaining social fairness and offers empirical suggestions for fostering prosocial behavior in young children.
We used SPSS 24.0 and R 4.2.2 software for data analysis in this study. Due to the non-normality of the data, Friedman tests were employed to compare the differences in third-party compensation and punishment intent and magnitude under the three allocation conditions. Additionally, as the data did not meet the normality assumption of residuals for linear regression, generalized linear models were run using the lme4 package in R software to examine the influence of gender, age, and perceived unfairness frequency on children's compensation and punishment willingness and degree. 
Regarding the data, the authors uploaded part of the study materials with the guidelines and detailed data for each study (sav.) and provided part of the R code.
DOI: 10.17632/mh32mymh62
title: Pharmacologic inhibition of nonsense-mediated decay induces anti-tumour immunogenicity in ex vivo patient tumours

description: Data and code for: Pharmacologic inhibition of nonsense-mediated decay induces anti-tumour immunogenicity in ex vivo patient tumours
DOI: 10.17632/nhxphwtktr
title: Inhibition of GCN2 Reveals Synergy with Cell-Cycle Regulation and Proteostasis

description: The integrated stress response is a signaling network comprising four branches, each sensing different cellular stressors, converging on the phosphorylation of eIF2α to downregulate global translation and initiate recovery. One of these branches includes GCN2, which senses cellular amino acid insufficiency and participates in maintaining amino acid homeostasis. Previous studies have shown that GCN2 is a viable cancer target when amino acid stress is induced by inhibiting an ad-ditional target. In this light, we screened myriad drugs for their potential to synergize with the GCN2 inhibitor TAP20. The drug sensitivity of six cancer cell lines to a panel of 25 compounds was assessed. Each compound was then combined with TAP20 at concentrations below their IC50, and the impact on cell growth was evaluated. The strongly synergistic combinations were further characterized using synergy analyses and matrix-dependent invasion assays. Inhibitors of proteostasis and the MEK–ERK pathway, as well as the pan-CDK inhibitors, flavopiridol, and seliciclib, were potently synergistic with TAP20 in two cell lines. Among their common CDK targets was CDK7, which was more selectively targeted by THZ-1 and synergized with TAP20. Moreover, these combinations were partially synergistic when assessed using matrix-dependent invasion assays. However, TAP20 alone was sufficient to restrict invasion at concentrations well below its growth-inhibitory IC50. We conclude that GCN2 inhibition can be further explored in vivo as a cancer target.
DOI: 10.6084/m9.figshare.23685984.v2
title: Dataset and R codes for the article: Acclimation of photosynthetic capacity of key mature North America’s boreal conifers to whole-ecosystem warming and elevated CO2 in the field

description: This dataset contains empirical data on photosynthetic capacity (<em>V</em>cmax and <em>J</em>max), and associated leaf mass per unit area (LMA) and leaf Nitrogen (N) data collected on two dominant conifer species, <em>Picea mariana</em> and <em>Larix laricina</em>, in June and August 2017 at the SPRUCE (Spruce and Peatland Responses Under Changing Environments) experiment that assesses the response of peatland ecosystems to whole-ecosystem warming and elevated atmospheric CO2 concentrations. The SPRUCE experiment is located 40 Km north of Grand Rapids, MN, in the USDA Forest Service Marcell Experimental Forest.
DOI: 10.17632/n8yy72yx2k
title: Data for: Neanderthals and the cult of the Sun Bird

description: Analysis of birds with taphonomic marks.
DOI: 10.6084/m9.figshare.27246639.v3
title: Ashwagandha Root Extract in Treatment of Mild Attention Deficit Hyperactivity Disorder (ADHD) in Children Aged 5–12 Years: A Prospective, Double-Blind, Randomized, Placebo Controlled Study

description: Ashwagandha (<i>Withania Somnifera Linn.</i>) is known for its broad pharmacological qualities, making it useful for a variety of therapeutic applications, including treating children with attention deficit hyperactivity disorder (ADHD).This randomized, double-blind, placebo-controlled study enrolled 8 children (boys and girls) aged 5-12 years having ADHD were randomly assigned to receive either oral (chewable gummy) ashwagandha root aqueous extract (ARE) 150mg/day (n=29) or an identical placebo (n=29) for 56 days in a 1:1 ratio. The primary outcome was the ADHD Rating Scale-IV. Secondary outcomes included Behavioural Regulation Index (BRI), Emotional Regulation Index (ERI), and Cognitive Regulation Index (CRI) scores from the Behaviour Rating Inventory of Executive Function 2 (BRIEF-2), Quality of Life (QoL) as measured by the Patient-Reported Outcomes Measurement Information System (PROMIS), and Clinician Global Impression. ARE treatment causes improvement in ADHD scores (p&lt;0.001). Children receiving ARE showed higher improvements (p&lt;0.001) in all dimensions of BRIEF-2 (BRI, ERI, and CRI) and PROMIS (p&lt;0.001). All patients reported an improvement on the CGI scale after receiving ARE, whereas 65.5% reported no change and 34.5% indicated minimal deterioration. One placebo patient experienced a fever, while one on ARE developed a cough. Both incidents were minor and addressed. Ashwagandha root extract is a potential therapeutic option in the management of ADHD in children.
DOI: 10.6084/m9.figshare.28682348.v1
title: Daily Carbon Price Data from Hubei, Guangzhou, and EU Emissions Trading Systems (2018–2024)

description: 该数据集提供了三个碳交易体系的每日碳价格数据（2018-2024 年）：湖北碳市场（中国）、广州碳市场（中国）和欧盟碳交易体系，这些数据来源于官方交易所并作为收盘价处理。它支持对区域碳定价动态、政策影响和跨市场风险溢出效应的比较研究。
DOI: 10.15468/dl.d972x8
title: Occurrence Download

description: A dataset containing 255 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Archips crataegana (Hübner, 1796-1799)"
 ]
}

 The dataset includes 255 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009213-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/7vbydxsx4p
title: LINF_130018600

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)