cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.u374tq
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leucocoryne violacescens Phil."
 ]
}

 The dataset includes 19 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008652-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.myvvm7
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((61.47234 35.35563,60.11837 33.97822,61.08772 33.38466,60.7181 30.66406,61.98022 28.51111,62.28938 26.70297,61.69767 24.75035,68.79399 24.04766,71.17242 24.96138,80.40672 23.93438,87.83359 23.66575,90.53061 23.02238,92.79078 20.41248,94.55897 16.14606,95.09777 15.62335,97.44462 15.91,98.19268 19.21335,98.6775 21.47515,98.45258 24.39094,98.22196 28.42848,97.98868 31.92942,93.43916 32.79861,77.29953 36.13996,75.91603 37.16283,71.41321 37.97938,68.14356 37.13727,61.47234 35.35563))",
 "TaxonKey is Gossypium hirsutum L."
 ]
}

 The dataset includes 98 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0179971-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.96637p
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypolytrum spongiosum T.Koyama"
 ]
}

 The dataset includes 83 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251486-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8snukm
title: Occurrence Download

description: A dataset containing 2084 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Occurrence data of tree species for crystalline Mountain Forest of Tanzania."
 ]
}

 The dataset includes 2084 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0179974-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.saqvw8
title: Occurrence Download

description: A dataset containing 17933 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ludwigia grandiflora (Michx.) Greuter & Burdet"
 ]
}

 The dataset includes 17933 records from 354 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0281806-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dgrva6
title: Occurrence Download

description: A dataset containing 185 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-161.6056 70.24753,-159.31249 60.56277,-148.66812 58.06232,-141.85011 62.06001,-141.40279 69.0049,-152.55749 70.25147,-161.6056 70.24753))",
 "TaxonKey is Picea glauca (Moench) Voss",
 "Year 2002-2022"
 ]
}

 The dataset includes 185 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0179966-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.catyjj
title: Occurrence Download

description: A dataset containing 3932 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saccharum officinarum L."
 ]
}

 The dataset includes 3932 records from 325 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251492-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cc3vzk
title: Occurrence Download

description: A dataset containing 28846 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is North America",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ginkgo biloba L.",
 "Year 1992-2022"
 ]
}

 The dataset includes 28846 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0234423-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhev88
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hedychium satyanarayanum S.C.Srivast."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237937-230224095556074/datasets/export for details.
DOI: 10.15468/dl.d26fwq
title: Occurrence Download

description: A dataset containing 486033 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stellaria media (L.) Vill.",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 486033 records from 2103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0261078-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6sbthk
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Elevation 1290.0-9999.0m",
 "Geometry POLYGON((-143.04586 61.14978,-141.34647 59.57414,-138.10156 57.89861,-134.32614 54.76103,-131.51848 51.23173,-125.43595 48.00122,-123.95967 45.23486,-124.29111 43.63856,-124.9017 43.69222,-124.6251 41.19112,-123.16152 36.91023,-121.53068 35.20034,-119.57737 35.13094,-118.53969 35.90302,-119.01605 38.37348,-120.11416 42.40265,-120.54497 45.18543,-120.22673 47.70548,-120.89809 49.9789,-123.45234 52.06137,-126.60042 55.81462,-130.00919 58.01288,-135.07029 60.94377,-140.36228 61.66287,-143.04586 61.14978))",
 "OccurrenceStatus is Present",
 "TaxonKey is Malacostraca"
 ]
}

 The dataset includes 42 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065840-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2prsua
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bursera cerasiifolia Brandegee"
 ]
}

 The dataset includes 129 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065839-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nazyyy
title: Occurrence Download

description: A dataset containing 2362 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lipotriches flavoviridis (Cockerell, 1905)"
 ]
}

 The dataset includes 2362 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065841-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rpu3ku
title: Occurrence Download

description: A dataset containing 11598890 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11598890 records from 1284 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065821-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15719117
title: Four-Phase C5G7 Transient Benchmark for Neutron Transport

description: Problem description

A multi-group small PWR-type reactor featuring four different transient phases driven by time-dependent source and continuous movements of control rods.

The geometry model and material cross-sections are based on the C5G7-TD benchmark [link]. A neutron source, uniformly distributed in the center pin cell of Assembly 4 (South-East), isotropically emits neutrons of the highest-speed energy group within the time t = 0 to t = 15 s. The problem features continuously moving control rods and is simulated up to t = 20 s.

The assembly-wise movements of the control rods (CRs) are shown in the file control-rod-position.png. The time-dependent source and the movements of the control rods result in the four transient phases:



Phase 1 (0 to 5 seconds): source-driven deeply subcritical system, reaching a steady state;

Phase 2 (5 to 10 seconds): gradual withdrawal of CRs, manifesting the S-shaped curve of reactivity worth in the total fission rate evolution;

Phase 3 (10 to 15 seconds): reactivity excursion, exhibiting rapid population growth;

Phase 4 (15 to 20 seconds): shutdown, followed by significant delayed neutron effects.


The quantity of interest is the 4D fission rate distribution binned into pitch-sized uniform spatial mesh (1.26 cm x 1.26 cm x 1.26 cm) in the core active region and 0.1 s uniform time mesh, resulting in 200 x (17x2) x (17x2) x (17x6) mesh bins.

Data provided



build-xml.py: OpenMC XML input builder script

output_*.h5: OpenMC Statepoint results run with increasing numbers of source particles per batch (over 30 batches)

MGXS-C5G7.h5: Multigroup cross-section data of the C5G7-TD model

control-rod-position.png: positions of the four control rod banks in time

mean.gif and sdev.gif: Visualizations of the quantity of interest from output_4.h5 data

difference.gif: Relative difference between MC/DC and OpenMC results

convergence.png: Convergence of the 2-norm of the relative difference between MC/DC and OpenMC results


The OpenMC results were generated using the following release.
DOI: 10.5281/zenodo.15719118
title: Four-Phase C5G7 Transient Benchmark for Neutron Transport

description: Problem description

A multi-group small PWR-type reactor featuring four different transient phases driven by time-dependent source and continuous movements of control rods.

The geometry model and material cross-sections are based on the C5G7-TD benchmark [link]. A neutron source, uniformly distributed in the center pin cell of Assembly 4 (South-East), isotropically emits neutrons of the highest-speed energy group within the time t = 0 to t = 15 s. The problem features continuously moving control rods and is simulated up to t = 20 s.

The assembly-wise movements of the control rods (CRs) are shown in the file control-rod-position.png. The time-dependent source and the movements of the control rods result in the four transient phases:



Phase 1 (0 to 5 seconds): source-driven deeply subcritical system, reaching a steady state;

Phase 2 (5 to 10 seconds): gradual withdrawal of CRs, manifesting the S-shaped curve of reactivity worth in the total fission rate evolution;

Phase 3 (10 to 15 seconds): reactivity excursion, exhibiting rapid population growth;

Phase 4 (15 to 20 seconds): shutdown, followed by significant delayed neutron effects.


The quantity of interest is the 4D fission rate distribution binned into pitch-sized uniform spatial mesh (1.26 cm x 1.26 cm x 1.26 cm) in the core active region and 0.1 s uniform time mesh, resulting in 200 x (17x2) x (17x2) x (17x6) mesh bins.

Data provided



build-xml.py: OpenMC XML input builder script

output_*.h5: OpenMC Statepoint results run with increasing numbers of source particles per batch (over 30 batches)

MGXS-C5G7.h5: Multigroup cross-section data of the C5G7-TD model

control-rod-position.png: positions of the four control rod banks in time

mean.gif and sdev.gif: Visualizations of the quantity of interest from output_4.h5 data

difference.gif: Relative difference between MC/DC and OpenMC results

convergence.png: Convergence of the 2-norm of the relative difference between MC/DC and OpenMC results


The OpenMC results were generated using the following release.
DOI: 10.15468/dl.a76nef
title: Occurrence Download

description: A dataset containing 1579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Cisticola lugubris (Rüppell, 1840)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 1579 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065842-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tedmsb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fragilaria parasitica var. subconstricta Grunow, 1881",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.6372 -28.0032,16.2782 -28.5786,20.509 -28.5786,20.509 -24.0715,15.4933 -24.0715,15.4945 -24.1257,16.0509 -25.6631,15.6372 -28.0032))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065843-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.29386667
title: Supplementary <i>Ecteinascidia turbinata</i> and <i>Ecteinascidia thurstoni </i>photos

description: <b>Abbreviations: CY = Cyprus, IS = Israel, SC = Suez Canal</b><br><b><i>Ecteinascidia turbinata</i></b><b> </b><b>photos from Cyprus</b>Microscope photos of specimen number #AS180724 – collected on 18/07/2024 from Limassol Marina, Cyprus. Features include zooids, gut loop, anus, and gonads. Collected at 0.3 to 4 m depth from artificial substrates (submerged pilings, ropes, and boat hulls). The specimen is deposited at the premises of Marine and Environmental Research (MER) Lab.<br>Field photos of specimen number #AS180724 – collected on 18/07/2024 from Limassol Marina, Cyprus. Additional <i>E. turbinata</i> photos from Cyprus were taken on (i) 17/10/2029 and 07/11/2024 at Zygi Marina, at depths of 0.2 to 1.0 m and (ii) 18/06/2024 and 24/04/2024 at Limassol Marina, on artificial substrates at 0–3 m depth<br><b><i>Ecteinascidia thurstoni</i></b><b><i> </i></b><b>photos from Israel</b>Microscope photos of specimen #AS25265, collected on 28/07/2005 from Muller Beach, Nahariya, Israel, at 4 m depth on hard substrate – deposited at the Steinhardt Museum of Natural History and National Research Center<br>Field photos of specimen #AS25265<b><i>Ecteinascidia thurstoni</i></b><b><i> </i></b><b>photos from Suez Canal</b>Microscope photos of specimens #AS8362 collected on 25/10/1971 at Ras Sidr Gulf of Suez, Egypt - deposited at the Steinhardt Museum of Natural History and National Research Center
DOI: 10.6084/m9.figshare.29386667.v2
title: Supplementary <i>Ecteinascidia turbinata</i> and <i>Ecteinascidia thurstoni </i>photos

description: <b>Abbreviations: CY = Cyprus, IS = Israel, SC = Suez Canal</b><br><b><i>Ecteinascidia turbinata</i></b><b> </b><b>photos from Cyprus</b>Microscope photos of specimen number #AS180724 – collected on 18/07/2024 from Limassol Marina, Cyprus. Features include zooids, gut loop, anus, and gonads. Collected at 0.3 to 4 m depth from artificial substrates (submerged pilings, ropes, and boat hulls). The specimen is deposited at the premises of Marine and Environmental Research (MER) Lab.<br>Field photos of specimen number #AS180724 – collected on 18/07/2024 from Limassol Marina, Cyprus. Additional <i>E. turbinata</i> photos from Cyprus were taken on (i) 17/10/2029 and 07/11/2024 at Zygi Marina, at depths of 0.2 to 1.0 m and (ii) 18/06/2024 and 24/04/2024 at Limassol Marina, on artificial substrates at 0–3 m depth<br><b><i>Ecteinascidia thurstoni</i></b><b><i> </i></b><b>photos from Israel</b>Microscope photos of specimen #AS25265, collected on 28/07/2005 from Muller Beach, Nahariya, Israel, at 4 m depth on hard substrate – deposited at the Steinhardt Museum of Natural History and National Research Center<br>Field photos of specimen #AS25265<b><i>Ecteinascidia thurstoni</i></b><b><i> </i></b><b>photos from Suez Canal</b>Microscope photos of specimens #AS8362 collected on 25/10/1971 at Ras Sidr Gulf of Suez, Egypt - deposited at the Steinhardt Museum of Natural History and National Research Center
DOI: 10.6084/m9.figshare.29386667.v1
title: Supplementary <i>Ecteinascidia turbinata</i> and Ecteinascidia thurstoni photos

description: <b>Abbreviations: CY = Cyprus, IS = Israel, SC = Suez Canal</b><br><b><i>Ecteinascidia turbinata</i></b><b> </b><b>photos from Cyprus</b>Microscope photos of specimen number #AS180724 – collected on 18/07/2024 from Limassol Marina, Cyprus. Features include zooids, gut loop, anus, and gonads. Collected at 0.3 to 4 m depth from artificial substrates (submerged pilings, ropes, and boat hulls). The specimen is deposited at the premises of Marine and Environmental Research (MER) Lab.<br>Field photos of specimen number #AS180724 – collected on 18/07/2024 from Limassol Marina, Cyprus. Additional <i>E. turbinata</i> photos from Cyprus were taken on (i) 17/10/2029 and 07/11/2024 at Zygi Marina, at depths of 0.2 to 1.0 m and (ii) 18/06/2024 and 24/04/2024 at Limassol Marina, on artificial substrates at 0–3 m depth<br><b><i>Ecteinascidia thurstoni</i></b><b><i> </i></b><b>photos from Israel</b>Microscope photos of specimen #AS25265, collected on 28/07/2005 from Muller Beach, Nahariya, Israel, at 4 m depth on hard substrate – deposited at the Steinhardt Museum of Natural History and National Research Center<br>Field photos of specimen #AS25265<b><i>Ecteinascidia thurstoni</i></b><b><i> </i></b><b>photos from Suez Canal</b>Microscope photos of specimens #AS8362 collected on 25/10/1971 at Ras Sidr Gulf of Suez, Egypt - deposited at the Steinhardt Museum of Natural History and National Research Center
DOI: 10.15468/dl.7ghb5u
title: Occurrence Download

description: A dataset containing 24489 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "TaxonKey is Platyhelminthes"
 ]
}

 The dataset includes 24489 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065844-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15368482
title: Common DNA sequence variation influences epigenetic aging in African populations

description: Code and source data to create main text figures for Common DNA sequence variation influences epigenetic aging in African populations (Communications Biology, 2025) 

There are 7 *ipynb files, one for each main text figure
DOI: 10.5281/zenodo.15723982
title: Common DNA sequence variation influences epigenetic aging in African populations

description: Code and source data to create main text figures for Common DNA sequence variation influences epigenetic aging in African populations (Communications Biology, 2025) 

There are 7 *ipynb files, one for each main text figure
DOI: 10.15468/dl.zn486b
title: Occurrence Download

description: A dataset containing 664 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bursera hindsiana (Benth.) Engl."
 ]
}

 The dataset includes 664 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065845-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15720205
title: Data Repository submission for "Optimizing the thermal capacity and mechanical strength of high permeability soils using ureolysis induced carbonate precipitation"

description: This folder includes the data and files that support the manuscript titled "Optimizing the thermal capacity and mechanical strength of high permeability soils using ureolysis induced carbonate precipitation". Please see included Readme for more information.
DOI: 10.5281/zenodo.15720206
title: Data Repository submission for "Optimizing the thermal capacity and mechanical strength of high permeability soils using ureolysis induced carbonate precipitation"

description: This folder includes the data and files that support the manuscript titled "Optimizing the thermal capacity and mechanical strength of high permeability soils using ureolysis induced carbonate precipitation". Please see included Readme for more information.
DOI: 10.15468/dl.zkm96z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fragilaria parasitica var. subconstricta Grunow, 1881",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.4784 -23.4046,15.4933 -24.0715,20.509 -24.0715,20.509 -24.0455,20.0952 -23.5072,19.9968 -23.017,19.7843 -22.5405,19.1988 -21.8785,18.5972 -21.5447,17.8859 -21.3993,17.1626 -21.4805,16.5332 -21.7596,16.1257 -22.0882,15.8234 -22.4662,15.606 -22.8993,15.4784 -23.4046))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065847-250525065834625/datasets/export for details.
DOI: 10.15468/dl.42dw29
title: Occurrence Download

description: A dataset containing 23189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Cisticola marginatus (Heuglin, 1869)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 23189 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065846-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axn4qq
title: Occurrence Download

description: A dataset containing 1194 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Eunectes murinus (Linnaeus, 1758)"
 ]
}

 The dataset includes 1194 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065848-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.