cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/dnscfxkddd.1
title: NSP16-deficient SARS-CoV- 2

description: Live attenuated vaccines might elicit mucosal and sterilizing immunity against SARS-CoV-2 that the existing mRNA, adenoviral vector and inactivated vaccines fail to induce. Here, we describe a candidate live attenuated vaccine strain of SARS-CoV-2 in which the NSP16 gene, which encodes 2′-O-methyltransferase, is catalytically disrupted by a point mutation. This virus, designated d16, was severely attenuated in hamsters and transgenic mice, causing only asymptomatic and nonpathogenic infection. A single dose of d16 administered intranasally resulted in sterilizing immunity in both the upper and lower respiratory tracts of hamsters, thus preventing viral spread in a contact-based transmission model. It also robustly stimulated humoral and cell-mediated immune responses, thus conferring full protection against lethal challenge with SARS-CoV-2 in a transgenic mouse model. The neutralizing antibodies elicited by d16 effectively cross-reacted with several SARS-CoV-2 variants. Secretory immunoglobulin A was detected in the blood and nasal wash of vaccinated mice. Our work provides proof-of-principle evidence for harnessing NSP16-deficient SARS- CoV-2 for the development of live attenuated vaccines and paves the way for further preclinical studies of d16 as a prototypic vaccine strain, to which new features might be introduced to improve safety, transmissibility, immunogenicity and efficacy.
DOI: 10.17632/3r873fnpkp.1
title: Extracellular secondary metabolites from five soil bacteria against Pulse-beetle for post-harvest preservation of Green-gram

description: This work was supported by Kavayitri Bahinabai Chaudhari North Maharashtra University Jalgaon, Center of Rajiv Gandhi Science and Technology Commission Mumbai under Grant number 32-II-LSR/2014 dated 15-12-2014. This work has been carried out at Department of Zoology, Arts, Commerce and Science College Dharangaon
DOI: 10.17632/8xcmdyhbxk.1
title: EER_2022_DATA

description: We design a natural field experiment to examine the impacts of norm-based interventions in enhancing honesty in a large decentralized marketplace fraught with contractual breaches owing to individual dishonesty. Sellers in fish markets of Kolkata, India, frequently cheat on the weight of the fish purchased via bilateral bargaining over price. We approach this marketplace and make two interventions: triggering a business norm driven by sellers’ adherence to a superstitious belief and enacting a norm-nudge in the form of moral suasion. Our design exploits a within-seller design whereby experimenter-buyers make scripted one-time purchases. We discover that the sellers behave strikingly honestly when the superstitious business norm is made salient. In contrast, moral suasion significantly decreases dishonesty, but its effect is markedly weaker than the superstition-based business norm. Our results suggest that direct normative appeals have the potential to make substantial headway to mitigate fraud in credence good markets where fraud is hard to detect due to information asymmetry.
DOI: 10.17632/8965fnhsfj.1
title: High fat diet-induced hyperlipidemic stress and redox imbalance in rat: Relevance to aging

description: Based on this data, we conclude that young rats display more potential to combat HFD-induced oxidative and hyperlipidemic stress compared to aged rats. We hypothesize that a low antioxidant capacity and a high level of reactive oxygen species in aged rats could be responsible for the observed effects. The study strengthens growing scientific opinion in support of an HFD induced oxidative stress, particularly during old age.
DOI: 10.17632/wzdvt6g3cz.1
title: A large-scale systematic survey reveals recurring molecular features of public antibody responses to SARS-CoV-2. Wang et al. 

description: Supplemental tables of a study on SARS-CoV-2 public antibody responses
DOI: 10.17632/t2dj9b9vbx.1
title: anthropometry and mobility data

description: Shape, Body Composition, Grip Strength and Gait Speed Data in Thai Adults
DOI: 10.17632/b9fb98hsmb.1
title: Microplastics and sorbed hydrophobic organic contaminants in lagoon and beach sediments.

description: This file contains the first reported data on hydrophobic organic contaminants (HOCs) and microplastics particles (MPs, 1 - 5 mm) in lagoon and beach sedimentary microplastics found along the Gulf of Guinea coastline (SE Atlantic), Nigeria. Primary data on polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs), and organochlorine pesticides (OCPs) associated with MPs are provided.
DOI: 10.17632/55hr73zc4y.1
title: A Dataset of Restitution Coefficients as well as Dynamic and Rolling Frictions for Rockfall Analysis

description: These data were collected from different studies in the literature and uploaded in the form of an Excel spreadsheet. Columns A to D of this spreadsheet represent the normal restitution coefficient, the tangential restitution coefficient, the dynamic friction coefficient, and the rolling friction coefficient, respectively. Additionally, Column E indicates the rock type from which the variables were extracted, and Column F indicates the primary source of the data.
DOI: 10.17632/jyj6pmbg3x.1
title: Alloys of Pt-Ru-Ir

description: Phase data of Pt-Ru-Ir alloys produced by the thermal pyrolysis technique.
DOI: 10.17632/c5wymn9w8j.2
title: Marmousi_Seism4ML

description: The data contains the synthetic seismograms computed for the modified Marmousi model and used for NDM-net training and verifications. Files are in segy format and can be read by standard seismic processing software. File mar5x_125.segy - contains the horizontal velocity component, computed on the grid with the step 1.25 m. File mar5x_25.segy - horizontal component computed on the grid with step 2.5 m, file mar5x_5.segy - horizontal component computed on the grid with step 5 m. Files mar5z_125.segy, mar5z_25.segy, and mar5z_5.segy contains the vertical component at the corresponding grid.
DOI: 10.17632/ds48ks6byt.2
title: Modeling and simulation of an urban wastewater treatment plant with an anoxic-aerobic MBR system using GPS-X software

description: This data set contains data on the modeling and simulation of an urban waste water treatment plant with an anoxic-aerobic MBR system using GPS-X software. The data sets contain information about desired operating conditions in wastewater treatment plants, values of parameters analyzed in the sampling campaign, results of the model calibration and of the scenarios presented in the simulation with the software.
DOI: 10.6084/m9.figshare.17122316
title: Predictive vegetation map of low-density juniper stands in SE South Dakota and NE Nebraska

description: The map of low-density juniper was generated using a random forests model that predicted the probability of low-density juniper (cover &lt; 15%) as a function of seed source distance, see source density, climate, topography, and land use. The final model had an area under the receiver operating characteristic curve (AUC) of 0.884. When low-density juniper was predicted using a probability cutoff of 0.38, the resulting classification had a sensitivity of 0.71 and a specificity of 0.88.<br>The low-density juniper probability map is stored as the GeoTIFF file "juniper_prob_masked.tif". The classified map based on a probability cutoff of 0.38 is stored as the GeoTIFF file "juniper_lowdens_masked.tif". The dataset has a raster cell size of 30 m and is in the UTM projection, zone 14N.
DOI: 10.6084/m9.figshare.17122316.v1
title: Predictive vegetation map of low-density juniper stands in SE South Dakota and NE Nebraska

description: The map of low-density juniper was generated using a random forests model that predicted the probability of low-density juniper (cover &lt; 15%) as a function of seed source distance, see source density, climate, topography, and land use. The final model had an area under the receiver operating characteristic curve (AUC) of 0.884. When low-density juniper was predicted using a probability cutoff of 0.38, the resulting classification had a sensitivity of 0.71 and a specificity of 0.88.<br>The low-density juniper probability map is stored as the GeoTIFF file "juniper_prob_masked.tif". The classified map based on a probability cutoff of 0.38 is stored as the GeoTIFF file "juniper_lowdens_masked.tif". The dataset has a raster cell size of 30 m and is in the UTM projection, zone 14N.
DOI: 10.17632/mvwvxk756z.1
title: Data to Accompany: European Epidemiological Patterns of Cannabis- and Substance- Related Chromosomal Congenital Anomalies: Space-time and Causal Inferential Study

description: Data to accompany paper of the above title
DOI: 10.17632/ztw7yfj68f.1
title: Healthcare in Asymmetrically Smart Future Environments: Applications, Challenges and Open Problems

description: The dataset contains the analysis of the studies discussed in the article "Healthcare in Asymmetrically Smart Future Environments: Applications, Challenges and Open Problems".
DOI: 10.17632/nmvmp6wmnf.1
title: Plasma Rich Proteins

description: Background: Platelet-rich plasma (PRP) and its derivatives are used in several aesthetic, dental, and musculoskeletal procedures. Their efficacy is primarily due to the release of various growth factors (GF), interleukins, cytokines, and white blood cells. However, the PRP preparation methods are highly variable, and studies lack consistency in reporting complete procedures to prepare PRP and characterize PRP and its derivatives. Also, all the tissue-specific (in vivo and in vitro) interactions and functional properties of the various derivatives/factors of the PRP have not been taken into consideration by any study so far. This creates a potential space for further standardization of the PRP preparation methods and customization of PRP/PRP derivatives targeted at tissue-specific/pathology specific requirements that would enable efficacious and widely acceptable usage of PRP as main therapy, rather than being used as adjuvant therapy. The main objective of our study was to investigate the variability in PRP preparation methods and to analyze their efficacy and reliability. Method: This study considered articles published in the last 5 years, highlighting the variability in their PRP preparation methods and characterization of PRP. Following the PRISMA protocol, we selected 12 articles for the study. The selected articles were assessed using NHLBI quality assessment tool. Results: We noted differences in 1) approaches in producing PRP, 2) extent of characterization of PRP, 3) small scale and large-scale preparation methods, 4) in vitro and in vivo studies. Conclusion: We identified two studies describing the procedures which are simple, reproducible, economical, provide a good yield of platelets, and therefore can be considered methods for further tissue-specific and pathology-specific standardizations of PRP and its derivatives. We recommend further randomized studies to understand the full therapeutic potential of the constituents of PRP and its derivatives.
DOI: 10.17632/drrcd4j7bv.1
title: Normative Reference Value of Double Simultaneous Stimulation in Asymptomatic Young Adults

description: This research is conducted to estimate the Normative Reference Value (NRV) of Double Simultaneous Stimulation (DSS)  in healthy young adults. This study focuses on two aspects of DSS, tactile and  visual. Tactile stimulations were given with objects of different textures like sandpaper, satin cloth etc., and visual stimulation were given on laptop screen with likely similar alphabets. Three responses (duration) were documented for each type stimulation in which subject appreciates the type of stimulation. Mean of each type of stimulation was calculated to determine the NRV.
DOI: 10.6084/m9.figshare.19393898
title: Internet addiction, self-control and depression among boys and girls: A moderated mediation analysis

description: The relationship between depression and Internet addiction in adolescents was the aim of previous research but less is known about the mechanism underlying this association. The aim of this study was to explore the role of self-control, loneliness and gender in the association between depression and Internet addiction.
DOI: 10.17632/gd24nvncvf.2
title: Immune priming in Armadillidium vulgare against Salmonella enterica: direct or indirect costs on life history traits?

description: Dataset and statistical script of the article : 
"Immune priming in Armadillidium vulgare against Salmonella enterica: direct or indirectcosts on life history traits?"
Cybèle PRIGOT-MAURICE1*, Charlotte DEPEUX1*, Hélène PAULHAC1, Christine BRAQUART-VARNIER1#, Sophie BELTRAN-BECH1#
1 Université de Poitiers, Laboratoire Ecologie et Biologie des Interactions, UMR CNRS 7267, 5 rue Jacques Fort, 86000 POITIERS, France.
* Co-first authors
# Co-last authors
Contact : cybele.prigot@univ-poitiers.fr

Experimental design of the article :

Firstly, we performed the priming procedure on three females’ treatments: either primed with low dose of living S. enterica (SAP, for S. enterica-primed), with sterile LB broth (LPB, for LB-primed) or without priming injection (NP, for non-primed; Fig.1). We added a fourth treatment in which the females have never been injected (NI, for non-injected, Control females). We used a total of 123 females, including 33 NP, 33 LBP, 32 SA and 25 NI (Control). 7 days after the priming procedure, SAP, NP and LBP females were injected with a LD50 of S. enterica and their survival rates were monitored for 22 days. Surviving females (NP = 20, LBP = 27, SAP= 26, NI, Control = 25) were weighted and placed onto a box (5x8cm) with one virgin non-injected male of same age. Each pair of individuals were kept on moistened potting mix with linden leaves and carrot slices ad libitum under a stimulating photoperiod (18:6, D/N) at room temperature.
Every three days for around 8 months, we monitored survival rates and physiological states of all females by observing their ventral face. The females that were about to lay eggs develop a marsupium following a parturial moult, which is observable under a binocular loupe (Moreau and Rigaud 2002). Once females were ready to deliver their offspring, they were placed alone in a box with soft humid paper. For each female, we counted the number of clutches (one or two), the number of days that they took to produce each clutch (i.e. from the contact with male to the delivery of offspring; or the time between the first and the second clutch), the number of offspring in each clutch and the total number of produced offspring. After the second clutch (when it occurred), we washed the females (0.28% NaClO then water) and measured the viable haemocyte size, viability (% of living cells), and concentration. We dissected the nervous chord to quantify the β-galactosidase activity. Because not all females produced a second clutch, we decided to sample and dissect the females having only one clutch at the same time we did this for the last females producing the second clutch (around 8 months after the beginning of the experiment).
DOI: 10.17632/7kzkgcry3r.1
title: Ambisonic Decoders MAA

description: Results from the Minimum Audible Angle investigation, the adaptive method
DOI: 10.17632/r8z85bnjm6.1
title: Association  between glycated hemoglobin and balance and plantar pressure distribution in patients with diabetic peripheral neuropathy.

description: It's a correlational study. The data was collected from Maharishi Markandeshwar Superspeciality Hospital, Neurological Physiotherapy OPD, Mullana, Ambala. The Glycated hemoglobin value was collected, their balance was measured using berg balance scale, time up and go test. The plantar impression was taken using Harris Mat in dynamic state while the patient was walking. The impression was analyzed using podiascan software. The correlation was analyzed between these variables.
DOI: 10.17632/ptxz57dmdt.1
title: GP ED

description: This data looks at GP referrals to the Emergency department in North Dublin.
DOI: 10.17632/ss3ncj9m8s.3
title: Titanite as a tracer for Nb mineralization during magmatic and hydrothermal processes: The case of Fangcheng alkaline complex, Central China

description: Supplementary data of "Titanite as a tracer for Nb mineralization during magmatic and hydrothermal processes: The case of Fangcheng alkaline complex, Central China" by Zhu Y.X. et al.
DOI: 10.17632/m32f9d7yj2.1
title: Does intergroup contact improve international altruism? The mediating role of identification with all humanity

description: Although there is no doubt that not only direct intergroup contact but also imagined intergroup contact can reduce prejudice and improve intergroup relationship, we also provide evidence that its benefits can extend to international altruism. This research investigated whether intergroup contact was associated with individuals’ identification with all humanity, which was further related to their international altruism. In study 1, 225 Chinese students were recruited as participants and the result indicated that direct intergroup contact was indirectly associated with international altruism via IWAH. Study 2 (N=85) revealed that participants who imagined a conversations with outgroup members subsequently reported more international altruism toward other nations compared to either participants who imagined the negative interaction or participants in the control condition. Overall, the main conclusion of this study is that people high in intergroup contact are more likely to identify themselves in all humanity, thus making them more likely to exhibit more international altruistic behavior.
DOI: 10.17632/gg8f2hwkxd.1
title: Four datasets for multi-input convolutional network 

description: Datasets used in paper: "Multi-input convolutional network for ultrafast simulation of field evolvement". 

Datasets were produced from massive (multi-)physics simulations. They are used to train multi-input convolutional network, which then can act as a cheap substitute of original physics-based models and allows for ultrafast simulation. 

The datasets and four related physical and engineering problems have distinct characteristics, which should present different challenges to a multi-input ConvNet. They can help comprehensively test the modeling capability of a multi-input ConvNet.

Note that the data requires further processing, namely properly preparing multi-input-output pairs, i.e.,((a,X), Y), for training the multi-input convolutional network. Please refer to the paper and code for greater details on how to use the data.
DOI: 10.17632/s3g5z29h7c.1
title: Ground- and transition- state calculations for reactions of graphene with H2O and CO2: armchair sites

description: Optimization and frequencies ab initio calculations obtained with Gaussian 16. The model chemistry and basis set used is B3LYP/6-311++g(d,p). This is part of the Supplementary Material for the article submitted to Carbon entitled: "Edge type effect in the gasification mechanism of graphene clusters with H2O and/or CO2: armchair vs. zigzag." Files are organized according to the figures of the mentioned article. Information about calculation times has been removed from the files.
DOI: 10.17632/jxjg8k4xy2.2
title: Humanized mice reveal a macrophage-enriched gene signature defining human lung tissue protection during SARS-CoV-2 infection. Kenney et al.

description: Summary of the study: The human immunological mechanisms defining the clinical outcome of SARS-CoV-2 infection remain elusive. This knowledge gap is mostly driven by the lack of appropriate experimental platforms recapitulating human immune responses in a controlled human lung environment.  Here, we report a mouse model (i.e. HNFL mice) co-engrafted with human fetal lung xenografts (fLX) and a myeloid-enhanced human immune system to identify cellular and molecular correlates of lung protection during SARS-CoV-2 infection.  Unlike mice solely engrafted with human fLX, HNFL mice are protected against infection, severe inflammation, and histopathological phenotypes. Lung tissue protection from infection and severe histopathology associate with macrophage infiltration and differentiation, and the upregulation of a macrophage-enriched signature composed of eleven specific genes mainly associated with the type I interferon signaling pathway. Our work highlights the HNFL model as a transformative platform to investigate, in controlled experimental setting, human myeloid immune mechanisms governing lung tissue protection during SARS-CoV-2 infection. 

This Mendeley dataset contains all of the Supplemental Items associated with this study. This includes the following:
- Spreadsheet S1. Related to Figure 1,4 and 6. Single-cell RNA sequencing gene-defining clusters and cluster annotation in naïve NRGL-LX and HNFL-LX, and in inoculated HNFL-LX (Excel file). 
- Spreadsheet S2. Related to Figure 1 and 5. Proteomic analysis Matrix: Naive NRGL-LX vs. HNFL-LX, Naïve HNFL-LX vs. 2DPI HNFL0LX, Naïve NRGL-LX vs. 2DPI NRGL-LX (Excel file).
- Spreadsheet S3. Related to Figure 5. Phospho-proteomics analysis Matrix: Naïve HNFL-LX vs. 2DPI HNFL0LX, Naïve NRGL-LX vs. 2DPI NRGL-LX (Excel file).
- Spreadsheet S4. Related to Figure 5. List of differentially expressed genes and IPA scores from bulk RNA sequencing analysis of naïve and inoculated NRGL-LX (Excel file).
- Spreadsheet S5. Related to all figures. List of the mice and fetal donor ID used in this study (Excel file).
- Movie S1. Related to Figure 2. Time-lapse (2DPI, 4DPI, 6DPI and 12DPI) 3D in vivo imaging of SARS-CoV-2 infection in NRGL mice (mp4 file).
DOI: 10.17632/5wvtcwtk98.1
title: Supplementary Material - Disproportional signal of sexual dysfunction reports associated with finasteride use in young men with androgenetic alopecia: A pharmacovigilance analysis of VigiBase

description: Supplementary Material of the paper entitled "Disproportional signal of sexual dysfunction reports associated with finasteride use in young men with androgenetic alopecia: A pharmacovigilance analysis of VigiBase"
DOI: 10.17632/kt7xd5y62v.1
title: Large datasets on dynamic properties of carbon fibre/shape memory polymer composites under various total and local temperature field

description: Shape memory polymers and their composites as a class of promising smart materials have been widely applied in aerospace engineering, soft robotics and healthcare fields. Mechanical properties of composites based on shape memory polymers however are sensitive to temperature and loading methods. The data paper presents the dynamic properties of carbon fibre reinforced shape memory polymer composite under various thermal total and local fields. The thermal fields were provided by attached electrothermal film and tested by the thermal imaging camera. The initial velocity was loaded by knocking vibration excitation and the response velocity was measured by Laser Doppler Velocimetry. The raw datasets obtained could support further study in the area and development of carbon fibre reinforced shape memory polymer composites.
DOI: 10.17632/3sp3sj4z8m.2
title: Length, weight, sex, gonad weight and maturity stage of Rutilus rutilus and Perca fluviatilis from the Ob River basin, Western Siberia

description: Excel file contains data on the total length, standard length, total weight, eviscerated weight, sex, gonad maturity stage, and gonad weight of roach Rutilus rutilus and perch Perca fluviatilis sampled in 2011 and 2012 in the Ob River basin. Fish were collected in 12 lakes and 2 rivers using gill-nets with 22 and 28 mm mesh sizes. Measurements for a total of 250 roaches and 274 perches are given.