cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7998068.v1
title: R code from Integrating plant species contribution to mycorrhizal and seed dispersal mutualistic networks

description: Mutualistic interactions like those established between plants and mycorrhizal fungi or seed dispersers are key drivers of plant population dynamics and ecosystem functioning; however, these interactions have rarely been explored together. We assembled a tripartite fungi–plant–disperser network in the Gorongosa National Park—Mozambique, to test (1) if diversity and importance of plant mutualists above- and belowground are correlated, and (2) whether biotically and abiotically dispersed plants are associated with distinct arbuscular mycorrhizal fungi (AMF). We quantified seed dispersal by animals for 1 year and characterized the community of 26 common plant species. Sixteen plant species were dispersed by 15 animals and colonized by 48 AMF virtual taxa (VT), while the remaining 10 plant species were not dispersed by animals and associated with 34 AMF VT. We found no evidence for a correlation between the number of plant partners above- and belowground or on plant specialization on both types of partners. We also found no evidence for differentiation of AMF communities between biotically and abiotically dispersed plants. Our results suggest that the establishment of plant interactions with seed dispersers and mycorrhizal fungi is largely independent and that both biotically and abiotically dispersed plants seem to associate with similar communities of AMF.
DOI: 10.6084/m9.figshare.7998257
title: Adjusted phylogeny from Rise of the titans: baleen whales became giants earlier than thought.

description: Adjusted phylogeny including the specimen from Peru
DOI: 10.6084/m9.figshare.7998251
title: Table S1 from Rise of the titans: baleen whales became giants earlier than thought.

description: Length estimates for Balaenoptera cf. musculus
DOI: 10.6084/m9.figshare.7998257.v2
title: Adjusted phylogeny from Rise of the titans: baleen whales became giants earlier than thought.

description: Adjusted phylogeny including the specimen from Peru
DOI: 10.6084/m9.figshare.7998251.v1
title: Table S1 from Rise of the titans: baleen whales became giants earlier than thought

description: Length estimates for Balaenoptera cf. musculus
DOI: 10.6084/m9.figshare.7998257.v1
title: Adjusted phylogeny from Rise of the titans: baleen whales became giants earlier than thought

description: Adjusted phylogeny including the specimen from Peru
DOI: 10.5281/zenodo.4090973
title: Between the Frames - Evaluation of Various Motion Interpolation Algorithms to Improve 360° Video Quality

description: With the increasing availability of 360° video content, it becomes important to provide smoothly playing videos of<br> high quality for end users. For this reason, we compare the influence of different Motion Interpolation (MI) algorithms on 360°<br> video quality. After conducting a pre-test with 12 video experts in [3], we found that MI is a useful tool to increase the QoE (Quality<br> of Experience) of omnidirectional videos. As a result of the pretest, we selected three suitable MI algorithms, namely ffmpeg<br> Motion Compensated Interpolation (MCI), Butterflow and Super- SloMo. Subsequently, we interpolated 15 entertaining and realworld<br> omnidirectional videos with a duration of 20 seconds from 30 fps (original framerate) to 90 fps, which is the native refresh<br> rate of the HMD used, the HTC Vive Pro. To assess QoE, we conducted two subjective tests with 24 and 27 participants. In<br> the first test we used a Modified Paired Comparison (M-PC) method, and in the second test the Absolute Category Rating<br> (ACR) approach. In the M-PC test, 45 stimuli were used and in the ACR test 60. Results show that for most of the 360° videos, the<br> interpolated versions obtained significantly higher quality scores than the lower-framerate source videos, validating our hypothesis<br> that motion interpolation can improve the overall video quality for 360° video. As expected, it was observed that the relative<br> comparisons in the M-PC test result in larger differences in terms of quality. Generally, the ACR method lead to similar results,<br> while reflecting a more realistic viewing situation. In addition, we compared the different MI algorithms and can conclude that<br> with sufficient available computing power Super-SloMo should be preferred for interpolation of omnidirectional videos, while<br> MCI also shows a good performance.
DOI: 10.5281/zenodo.4090972
title: Between the Frames - Evaluation of Various Motion Interpolation Algorithms to Improve 360° Video Quality

description: With the increasing availability of 360° video content, it becomes important to provide smoothly playing videos of<br> high quality for end users. For this reason, we compare the influence of different Motion Interpolation (MI) algorithms on 360°<br> video quality. After conducting a pre-test with 12 video experts in [3], we found that MI is a useful tool to increase the QoE (Quality<br> of Experience) of omnidirectional videos. As a result of the pretest, we selected three suitable MI algorithms, namely ffmpeg<br> Motion Compensated Interpolation (MCI), Butterflow and Super- SloMo. Subsequently, we interpolated 15 entertaining and realworld<br> omnidirectional videos with a duration of 20 seconds from 30 fps (original framerate) to 90 fps, which is the native refresh<br> rate of the HMD used, the HTC Vive Pro. To assess QoE, we conducted two subjective tests with 24 and 27 participants. In<br> the first test we used a Modified Paired Comparison (M-PC) method, and in the second test the Absolute Category Rating<br> (ACR) approach. In the M-PC test, 45 stimuli were used and in the ACR test 60. Results show that for most of the 360° videos, the<br> interpolated versions obtained significantly higher quality scores than the lower-framerate source videos, validating our hypothesis<br> that motion interpolation can improve the overall video quality for 360° video. As expected, it was observed that the relative<br> comparisons in the M-PC test result in larger differences in terms of quality. Generally, the ACR method lead to similar results,<br> while reflecting a more realistic viewing situation. In addition, we compared the different MI algorithms and can conclude that<br> with sufficient available computing power Super-SloMo should be preferred for interpolation of omnidirectional videos, while<br> MCI also shows a good performance.
DOI: 10.6084/m9.figshare.8020127
title: Data for the manuscript from Transitive inference in <i>Polistes</i> paper wasps.

description: Transitive inference (TI) is a form of logical reasoning that involves using known relationships to infer unknown relationships (A &gt; B; B &gt; C; then A &gt; C). TI has been found in a wide range of vertebrates but not in insects. Here, we test whether <i>Polistes dominula</i> and <i>Polistes metricus</i> paper wasps can solve a TI problem. Wasps were trained to discriminate between five elements in series (A<sub>0</sub>B-, B<sub>0</sub>C-, C<sub>0</sub>D-, D<sub>0</sub>E-), then tested on novel, untrained pairs (B versus D). Consistent with TI, wasps chose B more frequently than D. Wasps organized the trained stimuli into an implicit hierarchy and used TI to choose between untrained pairs. Species that form social hierarchies like <i>Polistes</i> may be predisposed to spontaneously organize information along a common underlying dimension. This work contributes to a growing body of evidence that the miniature nervous system of insects does not limit sophisticated behaviours.
DOI: 10.6084/m9.figshare.8020127.v2
title: Data for the manuscript from Transitive inference in <i>Polistes</i> paper wasps.

description: Transitive inference (TI) is a form of logical reasoning that involves using known relationships to infer unknown relationships (A &gt; B; B &gt; C; then A &gt; C). TI has been found in a wide range of vertebrates but not in insects. Here, we test whether <i>Polistes dominula</i> and <i>Polistes metricus</i> paper wasps can solve a TI problem. Wasps were trained to discriminate between five elements in series (A<sub>0</sub>B-, B<sub>0</sub>C-, C<sub>0</sub>D-, D<sub>0</sub>E-), then tested on novel, untrained pairs (B versus D). Consistent with TI, wasps chose B more frequently than D. Wasps organized the trained stimuli into an implicit hierarchy and used TI to choose between untrained pairs. Species that form social hierarchies like <i>Polistes</i> may be predisposed to spontaneously organize information along a common underlying dimension. This work contributes to a growing body of evidence that the miniature nervous system of insects does not limit sophisticated behaviours.
DOI: 10.6084/m9.figshare.8020127.v1
title: Data for the manuscript from Transitive inference in <i>Polistes</i> paper wasps

description: Transitive inference (TI) is a form of logical reasoning that involves using known relationships to infer unknown relationships (A &gt; B; B &gt; C; then A &gt; C). TI has been found in a wide range of vertebrates but not in insects. Here, we test whether <i>Polistes dominula</i> and <i>Polistes metricus</i> paper wasps can solve a TI problem. Wasps were trained to discriminate between five elements in series (A<sub>0</sub>B-, B<sub>0</sub>C-, C<sub>0</sub>D-, D<sub>0</sub>E-), then tested on novel, untrained pairs (B versus D). Consistent with TI, wasps chose B more frequently than D. Wasps organized the trained stimuli into an implicit hierarchy and used TI to choose between untrained pairs. Species that form social hierarchies like <i>Polistes</i> may be predisposed to spontaneously organize information along a common underlying dimension. This work contributes to a growing body of evidence that the miniature nervous system of insects does not limit sophisticated behaviours.
DOI: 10.6084/m9.figshare.8020163
title: Sample Data from A phylogenomic rodent tree reveals the repeated evolution of masseter architectures.

description: NCBI BioProject and BioSample numbers, voucher catalog numbers, locus data, and character state references for each sample.
DOI: 10.6084/m9.figshare.8020163.v1
title: Sample Data from A phylogenomic rodent tree reveals the repeated evolution of masseter architectures

description: NCBI BioProject and BioSample numbers, voucher catalog numbers, locus data, and character state references for each sample.
DOI: 10.6084/m9.figshare.8040242
title: City Data Table from Travel in city road networks follows similar transport trade-off principles to neural and plant arbors.

description: The city data table, including downtown coordinates, demographics, alpha and epsilon, and time information is provided as a comma-separated value (CSV) file
DOI: 10.6084/m9.figshare.8040242.v2
title: City Data Table from Travel in city road networks follows similar transport trade-off principles to neural and plant arbors.

description: The city data table, including downtown coordinates, demographics, alpha and epsilon, and time information is provided as a comma-separated value (CSV) file
DOI: 10.6084/m9.figshare.8053394
title: Synchrotron data and models: CoGF from Hydrogen-bond-mediated structural variation of metal guanidinium formate hybrid perovskites under pressure.

description: Integrated data and refined models from the single-crystal synchrotron X-ray experiments on CoGF
DOI: 10.6084/m9.figshare.8053394.v1
title: Synchrotron data and models: CoGF from Hydrogen-bond-mediated structural variation of metal guanidinium formate hybrid perovskites under pressure.

description: Integrated data and refined models from the single-crystal synchrotron X-ray experiments on CoGF
DOI: 10.6084/m9.figshare.8040242.v1
title: City Data Table from Travel in city road networks follows similar trade-off transport principles as neural and plant arbors

description: The city data table, including downtown coordinates, demographics, alpha and epsilon, and time information is provided as a comma-separated value (CSV) file
DOI: 10.6084/m9.figshare.8053397
title: Synchrotron data and models: MnGF from Hydrogen-bond-mediated structural variation of metal guanidinium formate hybrid perovskites under pressure.

description: Integrated data and refined models from the single-crystal synchrotron X-ray experiments on MnGF
DOI: 10.6084/m9.figshare.8053397.v1
title: Synchrotron data and models: MnGF from Hydrogen-bond-mediated structural variation of metal guanidinium formate hybrid perovskites under pressure.

description: Integrated data and refined models from the single-crystal synchrotron X-ray experiments on MnGF
DOI: 10.6084/m9.figshare.8053391
title: Laboratory data and models: MnGF from Hydrogen-bond-mediated structural variation of metal guanidinium formate hybrid perovskites under pressure.

description: Integrated data and refined model from the single-crystal laboratory X-ray experiment on MnGF
DOI: 10.6084/m9.figshare.8053391.v1
title: Laboratory data and models: MnGF from Hydrogen-bond-mediated structural variation of metal guanidinium formate hybrid perovskites under pressure.

description: Integrated data and refined model from the single-crystal laboratory X-ray experiment on MnGF
DOI: 10.6084/m9.figshare.8080916
title: Data for Graphs from Electrochemical characterization of manganese oxides as a water oxidation catalyst in proton exchange membrane electrolyser.

description: All data used for making the graphs.
DOI: 10.6084/m9.figshare.8080916.v2
title: Data for Graphs from Electrochemical characterization of manganese oxides as a water oxidation catalyst in proton exchange membrane electrolyser.

description: All data used for making the graphs.
DOI: 10.6084/m9.figshare.8080925
title: Phylogenetic tree used in the phylogenetic analyses from Testing the metabolic homeostasis hypothesis in amphibians.

description: A number of hypotheses about compensatory mechanisms that allow ectothermic animals to cope with the latitudinal decrease in ambient temperature (<i>T</i><sub>A</sub>) have been proposed during the last century. One of these hypotheses, the ‘metabolic homeostasis’ hypothesis (MHH), states that species should show the highest thermal sensitivity of the metabolic rate (<i>Q</i><sub>10-SMR</sub>) at the colder end of the range of <i>T</i><sub>A</sub>s they usually experience in nature. This way, species should be able to minimize maintenance costs during the colder hours of the day, but quickly take advantage of increases in <i>T</i><sub>A</sub> during the warmer parts of the day. Here, we created a dataset that includes <i>Q</i><sub>10-SMR</sub> values for 58 amphibian species, assessed at four thermal ranges, to evaluate three predictions derived from the MHH. In line with this hypothesis, we found that: (i) <i>Q</i><sub>10-SMR</sub> values tended to be positively correlated with latitude when measured at lower <i>T</i><sub>A</sub>s, but negative correlated with latitude when measured at higher <i>T</i><sub>A</sub>s, (ii) <i>Q</i><sub>10-SMR</sub> measured at lower <i>T</i><sub>A</sub>s were higher in temperate species, whereas <i>Q</i><sub>10-SMR</sub> measured at higher <i>T</i><sub>A</sub>s were higher in tropical species, and (iii) the experimental <i>T</i><sub>A</sub> at which <i>Q</i><sub>10-SMR</sub> was maximal for each species decreased with latitude. This is the first study to our knowledge showing that the relationship between <i>Q</i><sub>10-SMR</sub> and latitude in ectotherms changes with the <i>T</i><sub>A</sub> at which <i>Q</i><sub>10-SMR</sub> is assessed, as predicted from an adaptive hypothesis.This article is part of the theme issue ‘Physiological diversity and global patterns of biodiversity in a time of global climate change: testing and generating key hypotheses involving temperature and oxygen’.
DOI: 10.6084/m9.figshare.8080916.v1
title: Data for Graphs from Electrochemical characterization of manganese oxides as a water oxidation catalyst in proton exchange membrane electrolyzers

description: All data used for making the graphs.
DOI: 10.6084/m9.figshare.8080931
title: Scripts used in R from Testing the metabolic homeostasis hypothesis in amphibians.

description: A number of hypotheses about compensatory mechanisms that allow ectothermic animals to cope with the latitudinal decrease in ambient temperature (<i>T</i><sub>A</sub>) have been proposed during the last century. One of these hypotheses, the ‘metabolic homeostasis’ hypothesis (MHH), states that species should show the highest thermal sensitivity of the metabolic rate (<i>Q</i><sub>10-SMR</sub>) at the colder end of the range of <i>T</i><sub>A</sub>s they usually experience in nature. This way, species should be able to minimize maintenance costs during the colder hours of the day, but quickly take advantage of increases in <i>T</i><sub>A</sub> during the warmer parts of the day. Here, we created a dataset that includes <i>Q</i><sub>10-SMR</sub> values for 58 amphibian species, assessed at four thermal ranges, to evaluate three predictions derived from the MHH. In line with this hypothesis, we found that: (i) <i>Q</i><sub>10-SMR</sub> values tended to be positively correlated with latitude when measured at lower <i>T</i><sub>A</sub>s, but negative correlated with latitude when measured at higher <i>T</i><sub>A</sub>s, (ii) <i>Q</i><sub>10-SMR</sub> measured at lower <i>T</i><sub>A</sub>s were higher in temperate species, whereas <i>Q</i><sub>10-SMR</sub> measured at higher <i>T</i><sub>A</sub>s were higher in tropical species, and (iii) the experimental <i>T</i><sub>A</sub> at which <i>Q</i><sub>10-SMR</sub> was maximal for each species decreased with latitude. This is the first study to our knowledge showing that the relationship between <i>Q</i><sub>10-SMR</sub> and latitude in ectotherms changes with the <i>T</i><sub>A</sub> at which <i>Q</i><sub>10-SMR</sub> is assessed, as predicted from an adaptive hypothesis.This article is part of the theme issue ‘Physiological diversity and global patterns of biodiversity in a time of global climate change: testing and generating key hypotheses involving temperature and oxygen’.
DOI: 10.6084/m9.figshare.7325039
title: Code from Algorithm for a particle-based growth model for plant tissues.

description: Full Fortran Code
DOI: 10.6084/m9.figshare.8080925.v2
title: Phylogenetic tree used in the phylogenetic analyses from Testing the metabolic homeostasis hypothesis in amphibians.

description: A number of hypotheses about compensatory mechanisms that allow ectothermic animals to cope with the latitudinal decrease in ambient temperature (<i>T</i><sub>A</sub>) have been proposed during the last century. One of these hypotheses, the ‘metabolic homeostasis’ hypothesis (MHH), states that species should show the highest thermal sensitivity of the metabolic rate (<i>Q</i><sub>10-SMR</sub>) at the colder end of the range of <i>T</i><sub>A</sub>s they usually experience in nature. This way, species should be able to minimize maintenance costs during the colder hours of the day, but quickly take advantage of increases in <i>T</i><sub>A</sub> during the warmer parts of the day. Here, we created a dataset that includes <i>Q</i><sub>10-SMR</sub> values for 58 amphibian species, assessed at four thermal ranges, to evaluate three predictions derived from the MHH. In line with this hypothesis, we found that: (i) <i>Q</i><sub>10-SMR</sub> values tended to be positively correlated with latitude when measured at lower <i>T</i><sub>A</sub>s, but negative correlated with latitude when measured at higher <i>T</i><sub>A</sub>s, (ii) <i>Q</i><sub>10-SMR</sub> measured at lower <i>T</i><sub>A</sub>s were higher in temperate species, whereas <i>Q</i><sub>10-SMR</sub> measured at higher <i>T</i><sub>A</sub>s were higher in tropical species, and (iii) the experimental <i>T</i><sub>A</sub> at which <i>Q</i><sub>10-SMR</sub> was maximal for each species decreased with latitude. This is the first study to our knowledge showing that the relationship between <i>Q</i><sub>10-SMR</sub> and latitude in ectotherms changes with the <i>T</i><sub>A</sub> at which <i>Q</i><sub>10-SMR</sub> is assessed, as predicted from an adaptive hypothesis.This article is part of the theme issue ‘Physiological diversity and global patterns of biodiversity in a time of global climate change: testing and generating key hypotheses involving temperature and oxygen’.
DOI: 10.6084/m9.figshare.8080928
title: Thermal sensitivity values of amphibians from Testing the metabolic homeostasis hypothesis in amphibians.

description: Thermal sensitivity values, assessed at four thermal ranges, for 51 species of amphibians
DOI: 10.6084/m9.figshare.8080931.v2
title: Scripts used in R from Testing the metabolic homeostasis hypothesis in amphibians.

description: A number of hypotheses about compensatory mechanisms that allow ectothermic animals to cope with the latitudinal decrease in ambient temperature (<i>T</i><sub>A</sub>) have been proposed during the last century. One of these hypotheses, the ‘metabolic homeostasis’ hypothesis (MHH), states that species should show the highest thermal sensitivity of the metabolic rate (<i>Q</i><sub>10-SMR</sub>) at the colder end of the range of <i>T</i><sub>A</sub>s they usually experience in nature. This way, species should be able to minimize maintenance costs during the colder hours of the day, but quickly take advantage of increases in <i>T</i><sub>A</sub> during the warmer parts of the day. Here, we created a dataset that includes <i>Q</i><sub>10-SMR</sub> values for 58 amphibian species, assessed at four thermal ranges, to evaluate three predictions derived from the MHH. In line with this hypothesis, we found that: (i) <i>Q</i><sub>10-SMR</sub> values tended to be positively correlated with latitude when measured at lower <i>T</i><sub>A</sub>s, but negative correlated with latitude when measured at higher <i>T</i><sub>A</sub>s, (ii) <i>Q</i><sub>10-SMR</sub> measured at lower <i>T</i><sub>A</sub>s were higher in temperate species, whereas <i>Q</i><sub>10-SMR</sub> measured at higher <i>T</i><sub>A</sub>s were higher in tropical species, and (iii) the experimental <i>T</i><sub>A</sub> at which <i>Q</i><sub>10-SMR</sub> was maximal for each species decreased with latitude. This is the first study to our knowledge showing that the relationship between <i>Q</i><sub>10-SMR</sub> and latitude in ectotherms changes with the <i>T</i><sub>A</sub> at which <i>Q</i><sub>10-SMR</sub> is assessed, as predicted from an adaptive hypothesis.This article is part of the theme issue ‘Physiological diversity and global patterns of biodiversity in a time of global climate change: testing and generating key hypotheses involving temperature and oxygen’.