cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.u58yxy
title: Occurrence Download

description: A dataset containing 385 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abies cephalonica Loudon, Abies cephalonica var. submutica Bailly, Abies cephalonica var. parnassica Henkel & W.Hochst., Abies heterophylla K.Koch, Abies acicularis Maxim. ex Lavallée, Abies apollinis Link, Picea panachaica Heldr., Picea apollinis (Link) Rauch, Abies peloponnesica Haage ex Heldr., Abies cephalonica f. pseudocilicica Guinier & Maire, Abies reginae-amaliae Heldr., Abies peloponnesica Haage, Abies panachaica Heldr., Abies cephalonica var. arcadica Henkel & W.Hochst., Abies taxifolia hort., Abies apollinis Halácsy, Abies kukunaria Wender., 1831, Abies luscombeana Loudon, Pinus picea var. graeca Fraas, Abies cephalonica var. submutica E.Vilm., Abies taxifolia hort. ex Loudon, Abies cephalonica var. heterophylla K.Koch, Abies peloponnesiaca Haage ex K.Koch, Picea panachaica Heldr. ex Carrière, Abies acicularis Maxim., Pinus abies var. apollinis (Link) Endl., Picea apollinis (Link) Rauch ex Godr., Abies picea var. apollinis (Link) Lindl. & Gordon, Abies cephalonica var. apollinis (Link) Beissn., Abies cephalonica subsp. apollinis (Link) Silba, Pinus apollinis (Link) Antoine, Picea apollinis (Link) Rauch ex Gordon, Abies apollinis var. reginae-amaliae (Heldr.) Boiss., Abies cephalonica var. reginae-amaliae (Heldr.) Beissn., Pinus cephalonica var. reginae-amaliae (Heldr.) Voss, Picea apollinis var. panachaica (Heldr.) Boiss., Pinus abies var. panachaica (Heldr.) H.Christ, Abies apollinis var. panachaica (Heldr.) Boiss., Picea cephalonica var. panachaica (Heldr.) Lindl., Picea cephalonica (Loudon) Loudon, Pinus cephalonica (Loudon) Endl., Abies alba subsp. cephalonica (Loudon) K.Richt., Pinus abies var. cephalonica (Loudon) H.Christ, Abies alba var. cephalonica (Loudon) Richt., Abies cephalonica subsp. peloponnesiaca (Haage ex K.Koch) Silba, Abies cephalonica var. peloponnesiaca (Haage ex K.Koch) Viguié & Gaussen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 385 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005334-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eaurtc
title: Occurrence Download

description: A dataset containing 618 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Switzerland",
 "TaxonKey is Tyto alba (Scopoli, 1769)"
 ]
}

 The dataset includes 618 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005336-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.43666k
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Atelocynus microtis (Sclater, 1883)"
 ]
}

 The dataset includes 212 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005335-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/rh72yp
title: Bonaire Estafette Expedition 2022/2023 - Araneae

description: Contains data on Araneae collected during the inventory of the terrestrial invertebrates of Bonaire (Bonaire Estafette Expeditie 8 October 2022 to 2 March 2023). Published in: Steven IJland, Koen Verhoogt (2025). New records and an updated checklist of the spiders of Bonaire (Araneae). Nederlandse Faunistische Mededelingen 64.
DOI: 10.5281/zenodo.14707860
title: Genbank Accession Numbers of Variability in Host Specificity and Functional Potential of Antarctic Sponge-Associated Bacterial Communities

description: This dataset contains the accession numbers of BioSamples and SRA for 30 sequences of 16S rRNA extracted from the microbiome of Antarctic maritime sponges associated with the BioProject PRJNA611843. Scientific names, localities, and the latitude/longitude of the sponge hosts are also included.
description: Sponge-associated microorganisms are essential for sponge survival. They play an important role in recycling nutrients and, therefore, in the maintenance of the ecosystem. These microorganisms are diverse, species-specific, and different from those in the surrounding seawater. Bacterial sponge symbionts have been extensively studied in the tropics; however, little is known about these microorganisms in sponges from high-latitude environments. Sponges can cover up to 80% of the benthos in Antarctica and are crucial architects for the marine food web. In this study, we present analyses of the bacterial symbionts of three sponges: Haliclona (Rhizoniera) sp., Hymeniacidon torquata, and Isodictya kerguelenensis from the Western Antarctic Peninsula (WAP) with the aim to determine variations on the specificity of the bacteria–sponge interactions and potential signatures on their predicted functional profiles. We use high-throughput 16S rRNA gene sequencing of 30 sponge individuals inhabiting South Bay (Palmer Archipelago, WAP) to describe their microbiome taxonomy and diversity and predict potential functional profiles based on this marker gene. Our work shows similar bacterial community composition profiles among the same sponge species, although the symbiotic relationship is not equally conserved among the three Antarctic sponges. The number of species-specific core operational taxonomic units (OTUs) of these Antarctic sponges was low, with important differences between the total abundance accounted for these OTUs. Only eight OTUs were shared between the three sponge species. Analyses of the functional potential revealed that despite the high host–symbiont specificity, the inferred functions are conserved among these microbiomes, although with differences in the abundance of specific functions. H. torquata showed the highest level of intra-specificity and a higher potential of pathways related to energy metabolism, metabolisms of terpenoids and polyketides, and biosynthesis of other secondary metabolites. Overall, this work shows variations in the specificity of the sponge-associated bacterial communities, differences in how hosts and symbionts establish their relations, and in their potential functional capabilities.
DOI: 10.5281/zenodo.14707861
title: Genbank Accession Numbers of Variability in Host Specificity and Functional Potential of Antarctic Sponge-Associated Bacterial Communities

description: This dataset contains the accession numbers of BioSamples and SRA for 30 sequences of 16S rRNA extracted from the microbiome of Antarctic maritime sponges associated with the BioProject PRJNA611843. Scientific names, localities, and the latitude/longitude of the sponge hosts are also included.
description: Sponge-associated microorganisms are essential for sponge survival. They play an important role in recycling nutrients and, therefore, in the maintenance of the ecosystem. These microorganisms are diverse, species-specific, and different from those in the surrounding seawater. Bacterial sponge symbionts have been extensively studied in the tropics; however, little is known about these microorganisms in sponges from high-latitude environments. Sponges can cover up to 80% of the benthos in Antarctica and are crucial architects for the marine food web. In this study, we present analyses of the bacterial symbionts of three sponges: Haliclona (Rhizoniera) sp., Hymeniacidon torquata, and Isodictya kerguelenensis from the Western Antarctic Peninsula (WAP) with the aim to determine variations on the specificity of the bacteria–sponge interactions and potential signatures on their predicted functional profiles. We use high-throughput 16S rRNA gene sequencing of 30 sponge individuals inhabiting South Bay (Palmer Archipelago, WAP) to describe their microbiome taxonomy and diversity and predict potential functional profiles based on this marker gene. Our work shows similar bacterial community composition profiles among the same sponge species, although the symbiotic relationship is not equally conserved among the three Antarctic sponges. The number of species-specific core operational taxonomic units (OTUs) of these Antarctic sponges was low, with important differences between the total abundance accounted for these OTUs. Only eight OTUs were shared between the three sponge species. Analyses of the functional potential revealed that despite the high host–symbiont specificity, the inferred functions are conserved among these microbiomes, although with differences in the abundance of specific functions. H. torquata showed the highest level of intra-specificity and a higher potential of pathways related to energy metabolism, metabolisms of terpenoids and polyketides, and biosynthesis of other secondary metabolites. Overall, this work shows variations in the specificity of the sponge-associated bacterial communities, differences in how hosts and symbionts establish their relations, and in their potential functional capabilities.
DOI: 10.5281/zenodo.14773415
title: Non-targeted metabolomic analysis of fermented citrus peel pomace
DOI: 10.5281/zenodo.14773416
title: Non-targeted metabolomic analysis of fermented citrus peel pomace
DOI: 10.15468/dl.62tjsa
title: Occurrence Download

description: A dataset containing 362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Cedrela odorata L."
 ]
}

 The dataset includes 362 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005339-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18758/71021045
title: Molecular absorption cross-section datasets for atmospheric gas retrieval from GOMOS: NO2, NO3

description: The high-resolution cross-sections for NO2 and NO3 used in the new GOMOS cross-section database. 

This dataset is used in the publication: 
Bingen C, Robert C, Hermans C, Vanhellemont F, Mateshvili N, Dekemper E and Fussen D (2019) A Revised Cross-Section Database for Gas Retrieval in the UV-Visible-Near IR Range, Applied to the GOMOS Retrieval Algorithm AerGOM. Front. Environ. Sci. 7:118. https://doi.org/10.3389/fenvs.2019.00118
DOI: 10.15468/dl.j5qerb
title: Occurrence Download

description: A dataset containing 42512 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acacia dealbata Link, Acacia derwentii hort., Acacia puberula Denham, Acacia puberula Denham, Acacia puberula Denham, Acacia dealbata var. dealbata, Acacia decurrens var. mollis Lindl., Acacia derwentii hort. ex Siebert & Voss, Acacia decurrens var. dealbata (Link) F.Muell. ex Maiden, Acacia decurrens var. dealbata (Link) Muller, Mimosa dealbata Page, Racosperma dealbatum (Link) Pedley, Acacia decurrens f. mollis (Lindl.) Benth.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 42512 records from 286 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005338-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14721523
title: Genbank Accession Numbers of The right tool for the right question: contrasting biogeographic patterns in the notothenioid fish Harpagifer spp. along the Magellan Province

description: This dataset contains GenBank accession numbers for 35 cytochrome c oxidase subunit I (COI) genes, 34 D-loop (D-loop) genes and 5 Rhodopsin (rhodopsin) genes obtained from Harpagifer bispinis
description: Molecular-based analysis has become a fundamental tool to understand the role of Quaternary glacial episodes. In the Magellan Province in southern South America, ice covering during the last glacial maximum (20 ka) radically altered the landscape/seascape, speciation rates and distribution of species. For the notothenioid fishes of the genus Harpagifer, in the area are described two nominal species. Nevertheless, this genus recently colonized South America from Antarctica, providing a short time for speciation processes. Combining DNA sequences and genotyping-by-sequencing SNPs, we evaluated the role of Quaternary glaciations over the patterns of genetic structure in Harpagifer across its distribution in the Magellan Province. DNA sequences showed low phylogeographic structure, with shared and dominant haplotypes between nominal species, suggesting a single evolutionary unit. SNPs identified contrastingly two groups in Patagonia and a third well-differentiated group in the Falkland/Malvinas Islands with limited and asymmetric gene flow. Linking the information of different markers allowed us to infer the relevance of postglacial colonization mediated by the general oceanographic circulation patterns. Contrasting rough- and fine-scale genetic patterns highlights the relevance of combined methodologies for species delimitation, which, depending on the question to be addressed, allows discrimination among phylogeographic structure, discarding incipient speciation, and contemporary spatial differentiation processes.
DOI: 10.5281/zenodo.14721524
title: Genbank Accession Numbers of The right tool for the right question: contrasting biogeographic patterns in the notothenioid fish Harpagifer spp. along the Magellan Province

description: This dataset contains GenBank accession numbers for 35 cytochrome c oxidase subunit I (COI) genes, 34 D-loop (D-loop) genes and 5 Rhodopsin (rhodopsin) genes obtained from Harpagifer bispinis
description: Molecular-based analysis has become a fundamental tool to understand the role of Quaternary glacial episodes. In the Magellan Province in southern South America, ice covering during the last glacial maximum (20 ka) radically altered the landscape/seascape, speciation rates and distribution of species. For the notothenioid fishes of the genus Harpagifer, in the area are described two nominal species. Nevertheless, this genus recently colonized South America from Antarctica, providing a short time for speciation processes. Combining DNA sequences and genotyping-by-sequencing SNPs, we evaluated the role of Quaternary glaciations over the patterns of genetic structure in Harpagifer across its distribution in the Magellan Province. DNA sequences showed low phylogeographic structure, with shared and dominant haplotypes between nominal species, suggesting a single evolutionary unit. SNPs identified contrastingly two groups in Patagonia and a third well-differentiated group in the Falkland/Malvinas Islands with limited and asymmetric gene flow. Linking the information of different markers allowed us to infer the relevance of postglacial colonization mediated by the general oceanographic circulation patterns. Contrasting rough- and fine-scale genetic patterns highlights the relevance of combined methodologies for species delimitation, which, depending on the question to be addressed, allows discrimination among phylogeographic structure, discarding incipient speciation, and contemporary spatial differentiation processes.
DOI: 10.17632/vtz946zw22
title: RNASeq - 3D Organoids Reveal Cellular and Molecular Mechanisms of Synovial Tissue Formation 2/4
DOI: 10.15468/dl.bpyxp3
title: Occurrence Download

description: A dataset containing 18028 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Tectona L.f."
 ]
}

 The dataset includes 18028 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005342-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xukvwp
title: Occurrence Download

description: A dataset containing 975 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lixus filiformis Schoenherr"
 ]
}

 The dataset includes 975 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005343-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/cpnzrbvsyk
title: Supplemental information for "Biomarkers predictive of severe complications and mortality in patients with dipeptidyl peptidase-4 inhibitor-associated bullous pemphigoid: a retrospective longitudinal observational study"

description: Contents: Supplemental Methods and Legends Supplemental Fig 1 Supplemental Fig 2 Supplemental Fig 3 Supplemental Fig 4
DOI: 10.15468/dl.j7p5br
title: Occurrence Download

description: A dataset containing 164294 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mus musculus Linnaeus, 1758"
 ]
}

 The dataset includes 164294 records from 800 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005327-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5hu9rn
title: Occurrence Download

description: A dataset containing 312 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acer velutinum Boiss."
 ]
}

 The dataset includes 312 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0179197-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jhz4j5
title: Occurrence Download

description: A dataset containing 377 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sturnira magna de la Torre, 1966"
 ]
}

 The dataset includes 377 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284053-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cahwrm
title: Occurrence Download

description: A dataset containing 2187 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euptilotis neoxenus (Gould, 1838)"
 ]
}

 The dataset includes 2187 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0290982-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mxsgn3
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phrynomedusa appendiculata (Lutz, 1925)"
 ]
}

 The dataset includes 16 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0201155-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f8bdgx
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Citrus ×limon (L.) Burm.fil."
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0179203-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j4wkfj
title: Occurrence Download

description: A dataset containing 544 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is The reptiles and amphibians collection (RA) of the Muséum national d'Histoire Naturelle (MNHN - Paris)",
 "OccurrenceStatus is Present",
 "TaxonKey is Triturus cristatus (Laurenti, 1768)"
 ]
}

 The dataset includes 544 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0282400-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xte3dw
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Draba kitadakensis Koidz.",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 20 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0201118-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qetzfg
title: Occurrence Download

description: A dataset containing 11841895 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 11841895 records from 2137 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006958-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdpbeh
title: Occurrence Download

description: A dataset containing 6575 species occurrences available in GBIF matching the query:
{
 "and" : [
 "MediaType is Image",
 "OccurrenceStatus is Present",
 "TaxonKey is Mus musculus Linnaeus, 1758"
 ]
}

 The dataset includes 6575 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056199-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zd7xwi
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Procyon pygmaeus Merriam, 1901"
 ]
}

 The dataset includes 76 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009084-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b2uckh
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-10.0",
 "GadmGid is USA.45_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus gambelii Nutt.",
 "Year 2010-2021"
 ]
}

 The dataset includes 140 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0221411-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nkvbu9
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Panama, Costa Rica)",
 "TaxonKey is Cyclopes Gray, 1821"
 ]
}

 The dataset includes 60 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015440-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.