cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/h8shm4
title: What is Potentilla? A phylogeny-based taxonomy for Potentillinae (Rosaceae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Eriksson, Torsten, Persson, Nannie L., Smedmark, Jenny E. E. (2022): What is Potentilla? A phylogeny-based taxonomy for Potentillinae (Rosaceae). TAXON 71 (3): 493-505, DOI: 10.1002/tax.12679, URL: http://dx.doi.org/10.1002/tax.12679Abstract Classification of Potentilla L. has varied considerably through time. Some authors have collapsed all of the Potentilleae tribe into a single genus, while others have divided it into more than 20 genera. All those classifications, except for the one that collapsed them all, have rendered the genus Potentilla polyphyletic. We discuss Potentilla from a phylogenetic perspective in order to achieve a reasonable classification in which Potentilla is based on a clade (monophyly). Other criteria are taken into account, namely: history, phylogenetic stability, gene flow, information content and ease of identification. All previously described genera in Potentillinae are briefly discussed and assigned to major clades. In order to do this, it was necessary to designate types for: Fraga Lapeyr., Trichothalamus Spreng., and Dactylophyllum Spenn. We discuss seven scenarios, representing the effects of classifying Potentilla at the seven major clades in Potentillinae, and conclude that the most supported and least disruptive is to classify Potentilla as the clade comprising all of Potentillinae excluding the Anserina clade.
DOI: 10.15468/w9b3gs
title: Beitrag zur Zoogeographie einiger Oxypoda-Arten aus Italien mit Beschreibung einer neuen Art der Untergattung Thliboptera STEPHENS, 1839 (Coleoptera, Staphylinidae, Aleocharinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kapp, Andreas (2022): Beitrag zur Zoogeographie einiger Oxypoda-Arten aus Italien mit Beschreibung einer neuen Art der Untergattung Thliboptera STEPHENS, 1839 (Coleoptera, Staphylinidae, Aleocharinae). Linzer biologische Beiträge 54 (1): 183-193, DOI: 10.5281/zenodo.7507340
DOI: 10.15468/dhjwrn
title: A review of the genera Amauta Houlbert, 1918 and Divana J. Y. Miller, 1982 (Lepidoptera: Castniidae) with description of a new genus

description: This dataset contains the digitized treatments in Plazi based on the original journal article Worthy, Robert, González, Jorge M., Zilli, Alberto (2022): A review of the genera Amauta Houlbert, 1918 and Divana J. Y. Miller, 1982 (Lepidoptera: Castniidae) with description of a new genus. Zootaxa 5194 (3): 301-342, DOI: 10.11646/zootaxa.5194.3.1AbstractThe genera Amauta Houlbert, 1918 and Divana J.Y. Miller, 1982 are revised, with discussion of diagnostic features of males and females of all taxa. Details on their nomenclatural history, biogeography, and biology are included to solve several nomenclatural issues. Lectotypes are designated for Castnia (Amauta) papilionaris affinis Rothschild, 1919 and Castnia tricolor C. Felder & R. Felder, 1874. The status of the following taxa is revised: Amauta procera (Boisduval, [1875]) stat. rest., Amauta angusta (H. Druce, 1907) stat. rest., Castnia ambatensis Houlbert, 1917 syn. nov. of Castnia papilionaris papilionaris Walker, [1865], Castnia velutina Houlbert, 1917 syn. nov. of Castnia papilionaris papilionaris Walker, [1865], and Castnia diva chiriquiensis Strand, 1913 syn. nov. of Castnia diva diva Butler, 1870. Other taxa are revised, and their taxonomic status clarified. A new genus Vadina gen. nov. is proposed for Castnia hodeei Oberthür, 1881, which is removed (comb. nov.) from Telchin Hübner, [1825], whilst Amauta stat. rest. and Divana stat. rest., subsumed into Telchin in the most recent revision of the family, are herein reinstated as valid genera.
DOI: 10.5517/ccdc.csd.cc2pmf6z
title: CCDC 2491321: Experimental Crystal Structure Determination

description: Related Article: Gustavo G. Flores-Bernal, Carlos S. Ulloa-Chacha, Marco T. Espinoza-Nicolás, Luis D. Miranda|2025|J.Org.Chem.|||doi:10.1021/acs.joc.5c02773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/t9r7xv
title: The fifth family of the true crickets (Insecta: Orthoptera: Ensifera: Grylloidea), Oecanthidae defin. nov.: phylogenetic relationships and divergence times

description: This dataset contains the digitized treatments in Plazi based on the original journal article Campos, Lucas Denadai De, Dias, Pedro Guilherme Barrios De Souza, Audino, Jorge Alves, Desutter-Grandcolas, Laure, Nihei, Silvio Shigueo (2023): The fifth family of the true crickets (Insecta: Orthoptera: Ensifera: Grylloidea), Oecanthidae defin. nov.: phylogenetic relationships and divergence times. Zoological Journal of the Linnean Society 197 (4): 1034-1077, DOI: 10.1093/zoolinnean/zlac066, URL: http://dx.doi.org/10.1093/zoolinnean/zlac066
DOI: 10.15468/dgtjf3
title: New genera and species of deep-sea Goniasteridae (Asteroidea) from the North Pacific

description: This dataset contains the digitized treatments in Plazi based on the original journal article Mah, Christopher L. (2024): New genera and species of deep-sea Goniasteridae (Asteroidea) from the North Pacific. Zootaxa 5543 (4): 451-500, DOI: 10.11646/zootaxa.5543.4.1, URL: https://doi.org/10.11646/zootaxa.5543.4.1AbstractThe North Pacific is a vast region, and undiscovered taxa from deep-sea habitats (&gt; 200 m), especially from below 1000 m continue to be described based on in situ and museum collections. The Goniasteridae is the most diverse of Asteroidea and further discoveries continue to be made. Here, one new genus and seven new species are described and novel occurrences recorded. In situ observations from R /V Nautilus and MBARI permit further insight into goniasterid ecology and morphology in deep-sea settings.
DOI: 10.15468/dl.4dghbv
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spialia orbifer",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1970",
 "Country is one of (Italy, Switzerland, Germany, Austria, Slovenia, France)"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066797-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/yh8sxu
title: Revision of the Donald T. Kowalski’s collections of Lamproderma (Myxomycetes, Amoebozoa) reveals twice higher species diversity

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ronikier, Anna (2022): Revision of the Donald T. Kowalski’s collections of Lamproderma (Myxomycetes, Amoebozoa) reveals twice higher species diversity. Phytotaxa 531 (3): 175-210, DOI: 10.11646/phytotaxa.531.3.2AbstractDonald T. Kowalski’s herbarium collection gathered in 1960s is among the most important historical documentation of nivicolous myxomycete diversity in North America. A revision of speciose genus Lamproderma from this collection deposited in UC was undertaken. Based on examination of 95 specimens that were originally classified by Kowalski into 13 species, 25 species have been recognized. The identity of seven species: L. arcyrionema, L. biasperosporum, L. columbinum, L. disseminatum, L. echinosporum, L. maculatum, and L. scintillans was confirmed and all specimens represented the species as originally determined by Kowalski. Remaining 18 species were either differently interpreted or not distinguished by Kowalski. The most interesting of them is a single collection of Diacheopsis sp. that most likely belongs to an undescribed species. Attempts to obtain molecular barcode reference sequences from Kowalski’s specimens failed, likely due to the degradation of DNA induced by chemical treatment of collections in the past, thus this material remains available only for morphological comparisons. Results of the present revision contribute to more adequate estimation of diversity of Lamproderma species in the USA revealing a much higher number of species than originally reported. More generally, these results emphasize a need of revisions of old collections what is particularly important in the genera like Lamproderma where taxonomic changes proposed during last decades made older published records unequivocal or difficult to interpret.
DOI: 10.15468/dl.h53ffk
title: Occurrence Download

description: A dataset containing 2756 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pyrgus carthami",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1970",
 "Country is one of (Italy, Switzerland, Germany, Austria, Slovenia, France)"
 ]
}

 The dataset includes 2756 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066800-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eusvtd
title: Occurrence Download

description: A dataset containing 1156 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Achalinus"
 ]
}

 The dataset includes 1156 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066799-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25824628
title: Additional file 1 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 1: Table S1: Physicochemical properties and subcellular localization prediction of BnXTH proteins.
DOI: 10.6084/m9.figshare.25824628.v1
title: Additional file 1 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 1: Table S1: Physicochemical properties and subcellular localization prediction of BnXTH proteins.
DOI: 10.6084/m9.figshare.25824875
title: Additional file 2 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 2: Table S2: Table S2. XTH IDs of B. rapa and B. oleracea.
DOI: 10.6084/m9.figshare.25824875.v1
title: Additional file 2 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 2: Table S2: Table S2. XTH IDs of B. rapa and B. oleracea.
DOI: 10.6084/m9.figshare.26720574
title: Additional file 3 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 3: Table S3: Collinearity of XTH genes in B. napus, B. rapa, and B. oleracea.
DOI: 10.6084/m9.figshare.26720574.v1
title: Additional file 3 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 3: Table S3: Collinearity of XTH genes in B. napus, B. rapa, and B. oleracea.
DOI: 10.6084/m9.figshare.26720577
title: Additional file 4 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 4: Table S5: Collinearity of XTH genes in B. napus.
DOI: 10.6084/m9.figshare.26720577.v1
title: Additional file 4 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 4: Table S5: Collinearity of XTH genes in B. napus.
DOI: 10.6084/m9.figshare.26720580
title: Additional file 5 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 5: Table S4: Collinearity of XTH genes in B. napus.
DOI: 10.6084/m9.figshare.26720580.v1
title: Additional file 5 of Identification and expression analysis of the Xyloglucan transglycosylase/hydrolase (XTH) gene family under abiotic stress in oilseed (Brassica napus L.)

description: Supplementary Material 5: Table S4: Collinearity of XTH genes in B. napus.
DOI: 10.6084/m9.figshare.26720583.v1
title: Additional file 3 of PAX6 promotes neuroendocrine phenotypes of prostate cancer via enhancing MET/STAT5A-mediated chromatin accessibility

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26720586.v1
title: Additional file 4 of PAX6 promotes neuroendocrine phenotypes of prostate cancer via enhancing MET/STAT5A-mediated chromatin accessibility

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.26720583
title: Additional file 3 of PAX6 promotes neuroendocrine phenotypes of prostate cancer via enhancing MET/STAT5A-mediated chromatin accessibility

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26720586
title: Additional file 4 of PAX6 promotes neuroendocrine phenotypes of prostate cancer via enhancing MET/STAT5A-mediated chromatin accessibility

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.26720589
title: Additional file 5 of PAX6 promotes neuroendocrine phenotypes of prostate cancer via enhancing MET/STAT5A-mediated chromatin accessibility

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.26720589.v1
title: Additional file 5 of PAX6 promotes neuroendocrine phenotypes of prostate cancer via enhancing MET/STAT5A-mediated chromatin accessibility

description: Supplementary Material 5
DOI: 10.15468/dl.byqnq7
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Kenya",
 "TaxonKey is Cheumatopsyche Wallengren, 1891"
 ]
}

 The dataset includes 55 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072929-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26720625
title: Additional file 6 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 6: Table S1. Performance of models trained on single feature or stacked features in the training cohort.
DOI: 10.6084/m9.figshare.26720625.v1
title: Additional file 6 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 6: Table S1. Performance of models trained on single feature or stacked features in the training cohort.
DOI: 10.6084/m9.figshare.26720628.v1
title: Additional file 7 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 7: Table S2. Performance of models trained on single feature or stacked features in the validation cohort.
DOI: 10.6084/m9.figshare.26720631
title: Additional file 8 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 8: Table S3. AUCs of 10-fold cross-validation on the training cohort.
DOI: 10.6084/m9.figshare.26720631.v1
title: Additional file 8 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 8: Table S3. AUCs of 10-fold cross-validation on the training cohort.
DOI: 10.6084/m9.figshare.26720634
title: Additional file 9 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 9: Table S4. Performance of single feature models or the stacked model using down-sized WGS data in the validation cohort.
DOI: 10.6084/m9.figshare.26720634.v1
title: Additional file 9 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 9: Table S4. Performance of single feature models or the stacked model using down-sized WGS data in the validation cohort.
DOI: 10.6084/m9.figshare.26720628
title: Additional file 7 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 7: Table S2. Performance of models trained on single feature or stacked features in the validation cohort.
DOI: 10.6084/m9.figshare.26720637
title: Additional file 10 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 10: Table S5. Gene coefficients of the NF model.
DOI: 10.6084/m9.figshare.26720637.v1
title: Additional file 10 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 10: Table S5. Gene coefficients of the NF model.
DOI: 10.6084/m9.figshare.26720640
title: Additional file 11 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 11: Table S6. Enrichment analysis of the top 500 genes that contribute the most to predict PAC against CCA/GBC in the NF model using ToppGene.
DOI: 10.6084/m9.figshare.26720640.v1
title: Additional file 11 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 11: Table S6. Enrichment analysis of the top 500 genes that contribute the most to predict PAC against CCA/GBC in the NF model using ToppGene.
DOI: 10.6084/m9.figshare.26720643
title: Additional file 12 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 12: Table S7. CF model performance.
DOI: 10.6084/m9.figshare.26720643.v1
title: Additional file 12 of Detection and characterization of pancreatic and biliary tract cancers using cell-free DNA fragmentomics

description: Supplementary Material 12: Table S7. CF model performance.
DOI: 10.6084/m9.figshare.25834100
title: Additional file 1 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.25834100.v1
title: Additional file 1 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.25834238
title: Additional file 2 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.25834238.v1
title: Additional file 2 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26720646
title: Additional file 3 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.26720646.v1
title: Additional file 3 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.26720649.v1
title: Additional file 4 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.26720652
title: Additional file 5 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 5.
DOI: 10.5517/ccw9llb
title: CCDC 813582: Experimental Crystal Structure Determination

description: Related Article: Boris A. Zakharov,   Boris A. Kolesov   and   Elena V. Boldyreva|2011|Phys.Chem.Chem.Phys.(PCCP)|13|13106|doi:10.1039/C1CP20599D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccw9lmc
title: CCDC 813583: Experimental Crystal Structure Determination

description: Related Article: Boris A. Zakharov,   Boris A. Kolesov   and   Elena V. Boldyreva|2011|Phys.Chem.Chem.Phys.(PCCP)|13|13106|doi:10.1039/C1CP20599D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.6mn23c
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Fungi)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-142.5 15,-135 15,-135 22.5,-142.5 22.5,-142.5 15))"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044688-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccw9lk9
title: CCDC 813581: Experimental Crystal Structure Determination

description: Related Article: Boris A. Zakharov,   Boris A. Kolesov   and   Elena V. Boldyreva|2011|Phys.Chem.Chem.Phys.(PCCP)|13|13106|doi:10.1039/C1CP20599D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccw9lh7
title: CCDC 813579: Experimental Crystal Structure Determination

description: Related Article: Boris A. Zakharov,   Boris A. Kolesov   and   Elena V. Boldyreva|2011|Phys.Chem.Chem.Phys.(PCCP)|13|13106|doi:10.1039/C1CP20599D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.