cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.yupz23
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chromolaena odorata",
 "Country is Tanzania, United Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 122 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020887-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u254qp
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chromolaena odorata",
 "Country is Sri Lanka",
 "HasCoordinate is true"
 ]
}

 The dataset includes 72 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020886-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ckftde
title: Occurrence Download

description: A dataset containing 11394 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carex multinervis, Carex ovata, Carex rodriguezii, Carex sadleri, Carex versicolor, Trasus binervis, Trasus binervis androgynus, Trasus binervis ramosus, Carex umbrosa, Carex bremurii)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 11394 records from 282 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020888-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p787pb
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crassostrea gigas",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020889-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cgtw2f
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cycloloma atriplicifolium",
 "Country is Italy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020891-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8yr8ps
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chinese Taipei",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dryopteris decipiens"
 ]
}

 The dataset includes 19 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020890-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16260066
title: ACEM 9742 - raw data
DOI: 10.5281/zenodo.16260067
title: ACEM 9742 - raw data
DOI: 10.15468/dl.8zfa5c
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 {
 "or" : [
 "Geometry POLYGON((-109.13685 26.5492,-79.02046 26.5492,-79.02046 44.42729,-109.13685 44.42729,-109.13685 31.40669,-109.13685 26.5492))",
 "Geometry POLYGON((-117.27586 19.78803,-70.07505 19.78803,-70.07505 47.01927,-117.27586 47.01927,-117.27586 19.78803))"
 ]
 },
 "TaxonKey is Rana catesbeiana"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020892-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ur6bjt
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 {
 "or" : [
 "Geometry POLYGON((-109.13685 26.5492,-79.02046 26.5492,-79.02046 44.42729,-109.13685 44.42729,-109.13685 31.40669,-109.13685 26.5492))",
 "Geometry POLYGON((-117.27586 19.78803,-70.07505 19.78803,-70.07505 47.01927,-117.27586 47.01927,-117.27586 19.78803))"
 ]
 },
 "TaxonKey is Rana catesbeiana"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020893-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgxmdz
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canis lupus",
 "Country is Saint Lucia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020894-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y6as4d
title: Occurrence Download

description: A dataset containing 77932 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amelanchier",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than 1000",
 "Year is greater than or equal to 1970",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 77932 records from 402 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020885-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c3tsqn
title: Occurrence Download

description: A dataset containing 332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chromolaena odorata",
 "Country is Thailand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 332 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020895-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29608376
title: Code and source data: Pre-Transplant Donor-Recipient Mixed Immune Reaction Enables Identification of Post-Transplant Risk Factors and Therapeutic Targets for aGVHD

description: The R script, codes, and RDS files used in the study of Pre-Transplant Donor-Recipient Mixed Immune Reaction Enables Identification of Post-Transplant Risk Factors and Therapeutic Targets for aGVHD
DOI: 10.6084/m9.figshare.29608376.v1
title: Code and source data: Pre-Transplant Donor-Recipient Mixed Immune Reaction Enables Identification of Post-Transplant Risk Factors and Therapeutic Targets for aGVHD

description: The R script, codes, and RDS files used in the study of Pre-Transplant Donor-Recipient Mixed Immune Reaction Enables Identification of Post-Transplant Risk Factors and Therapeutic Targets for aGVHD
DOI: 10.15468/dl.ty896p
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cassia fistula",
 "Country is Timor-Leste",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020896-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16259042
title: Experimental data of three identical residential buildings controlled with different controllers for heating demand response

description: The data will be published soon.
DOI: 10.15468/dl.wtzang
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canis lupus",
 "Country is Sao Tome and Principe",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020897-250717081556266/datasets/export for details.
DOI: 10.15468/dl.n253sa
title: Occurrence Download

description: A dataset containing 2259 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melanthium virginicum"
 ]
}

 The dataset includes 2259 records from 137 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020898-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15432147
title: Supplement to: Evaluation of Creatinine-Based Methods for Estimating the Urine Volume of Lactating and Dry Dairy Cows with Special Consideration of Using Spot Urine Samples

description: The deposited data contains three data tables and three associated tables with data legends. An overview is shown in the file ‘00_estimating_urine_data_overview'.
DOI: 10.15468/dl.5uc9z8
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chromolaena odorata",
 "Country is Timor-Leste",
 "HasCoordinate is true"
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020899-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.agje6k
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chromolaena odorata",
 "Country is Togo",
 "HasCoordinate is true"
 ]
}

 The dataset includes 98 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020900-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15527032
title: AlphaFold 3 predictions of diubiquitin complexes using cysteine mutants and bonded linkers

description: Alphafold 3 predictions of PDB structures* 5ymy* 6isu* 6tuv* 6ud0* 7keo* 7m4n* 7uyh* 9avt* 7uv5* 8c61* 8j1pusing standard AF3 / correlated cysteine mutations / covalent linkers, as well as* structure of a branched polyUb chain* rpn1 in complex with triUb* rpn13 in complex with triUb

For processing with the scripts available at https://github.com/bio-phys/polyUb-AF, the AF3 CIF files must be converted to PDBs using the 'convert_all_cif_to_pdb.sh' VMD script found in each directory. Note that it requires 'cif2pdb.vmd'.
DOI: 10.5281/zenodo.16259728
title: AlphaFold 3 predictions of diubiquitin complexes using cysteine mutants and bonded linkers

description: Alphafold 3 predictions of PDB structures* 5ymy* 6isu* 6tuv* 6ud0* 7keo* 7m4n* 7uyh* 9avt* 7uv5* 8c61* 8j1pusing standard AF3 / correlated cysteine mutations / covalent linkers, as well as* structure of a branched polyUb chain* rpn1 in complex with triUb* rpn13 in complex with triUb

For processing with the scripts available at https://github.com/bio-phys/polyUb-AF, the AF3 CIF files must be converted to PDBs using the 'convert_all_cif_to_pdb.sh' VMD script found in each directory. Note that it requires 'cif2pdb.vmd'.
DOI: 10.15468/dl.eab48d
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Japalura polygonata",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 110 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020904-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ktynp3
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 {
 "or" : [
 "Geometry POLYGON((-109.13685 26.5492,-79.02046 26.5492,-79.02046 44.42729,-109.13685 44.42729,-109.13685 31.40669,-109.13685 26.5492))",
 "Geometry POLYGON((-117.27586 19.78803,-70.07505 19.78803,-70.07505 47.01927,-112.1927 47.01927,-117.27586 47.01927,-117.27586 19.78803))"
 ]
 },
 "TaxonKey is Rana catesbeiana"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020902-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tntjt4
title: Occurrence Download

description: A dataset containing 113801 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Macaria liturata"
 ]
}

 The dataset includes 113801 records from 383 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020830-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16260262
title: testdata

description: some description
DOI: 10.15468/dl.mwbaj5
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Achatina immaculata",
 "Country is Seychelles",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020905-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qhf4sv
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Hong Kong, Macao, Chinese Taipei)",
 "TaxonKey is Macrophya"
 ]
}

 The dataset includes 212 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020906-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15853039
title: Italian Diamond Open Access Dataset

description: This dataset supports the analysis presented in the related publication “Charting the Landscape of Italian Diamond Open Access Publishing.”





datasources.xlsx contains a curated and aggregated list of data sources used to identify and analyze Italian Diamond Open Access journals.




italian_dump.tar.gz includes a subgraph extracted from OpenAIRE, comprising all publications affiliated with Italian institutions, along with their associated metadata.



To fully reproduce the analyses presented in the article, a Jupyter notebook is provided in the associated GitHub repository. This notebook allows for exploration and replication of the study’s results.

The dataset is designed to facilitate the reproducibility of the study.
DOI: 10.60712/si-id275465.1
title: StrainInfo SI-ID 275465.1

description: StrainInfo dataset 275465 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275466.1
title: StrainInfo SI-ID 275466.1

description: StrainInfo dataset 275466 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275536.1
title: StrainInfo SI-ID 275536.1

description: StrainInfo dataset 275536 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275537.1
title: StrainInfo SI-ID 275537.1

description: StrainInfo dataset 275537 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275538.1
title: StrainInfo SI-ID 275538.1

description: StrainInfo dataset 275538 about a strain of Kazachstania exigua. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275539.1
title: StrainInfo SI-ID 275539.1

description: StrainInfo dataset 275539 about a strain of Lachancea kluyveri. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275597.1
title: StrainInfo SI-ID 275597.1

description: StrainInfo dataset 275597 about a strain of Torulaspora delbrueckii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275598.1
title: StrainInfo SI-ID 275598.1

description: StrainInfo dataset 275598 about a strain of Cutaneotrichosporon cutaneum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275599.1
title: StrainInfo SI-ID 275599.1

description: StrainInfo dataset 275599 about a strain of Cutaneotrichosporon cutaneum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275600.1
title: StrainInfo SI-ID 275600.1

description: StrainInfo dataset 275600 about a strain of Cutaneotrichosporon cutaneum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275467.1
title: StrainInfo SI-ID 275467.1

description: StrainInfo dataset 275467 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275468.1
title: StrainInfo SI-ID 275468.1

description: StrainInfo dataset 275468 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275469.1
title: StrainInfo SI-ID 275469.1

description: StrainInfo dataset 275469 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275470.1
title: StrainInfo SI-ID 275470.1

description: StrainInfo dataset 275470 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275540.1
title: StrainInfo SI-ID 275540.1

description: StrainInfo dataset 275540 about a strain of Lachancea kluyveri. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275541.1
title: StrainInfo SI-ID 275541.1

description: StrainInfo dataset 275541 about a strain of Saccharomyces paradoxus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275542.1
title: StrainInfo SI-ID 275542.1

description: StrainInfo dataset 275542 about a strain of Saccharomyces paradoxus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275543.1
title: StrainInfo SI-ID 275543.1

description: StrainInfo dataset 275543 about a strain of Saccharomyces paradoxus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275601.1
title: StrainInfo SI-ID 275601.1

description: StrainInfo dataset 275601 about a strain of Cutaneotrichosporon cutaneum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id275602.1
title: StrainInfo SI-ID 275602.1

description: StrainInfo dataset 275602 about a strain of Cutaneotrichosporon cutaneum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.m5xveh
title: Occurrence Download

description: A dataset containing 1198 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crotalus pricei Van Denburgh, 1895"
 ]
}

 The dataset includes 1198 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0229404-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id275603.1
title: StrainInfo SI-ID 275603.1

description: StrainInfo dataset 275603 about a strain of Cutaneotrichosporon cutaneum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.