cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/vr8fcbczz5
title: Acquisition of aneuploidy drives mutant p53-associated gain-of-function phenotypes 

description: p53 is mutated in over half of human cancers. In addition to losing wild-type (WT) tumor-suppressive function, mutant p53 proteins are proposed to acquire gain-of-function (GOF) activity, leading to novel oncogenic phenotypes. To study mutant p53 GOF mechanisms and phenotypes, we genetically engineered non-transformed and tumor-derived WT p53 cell line models to express endogenous missense mutant p53 (R175H and R273H) or to be deficient for p53 protein (null). Characterization of the models, which initially differed only by TP53 genotype, revealed that aneuploidy frequently occurred in mutant p53-expressing cells. GOF phenotypes occurred clonally in vitro and in vivo were independent of p53 alteration and correlated with increased aneuploidy. Further, analysis of outcome data revealed that individuals with aneuploid-high tumors displayed unfavorable prognoses, regardless of the TP53 genotype. Our results indicate that genetic variation resulting from aneuploidy accounts for the diversity of previously reported mutant p53 GOF phenotypes. 

The data herein represents the raw data and/or processed data from MCF10A and CAL-51 isogenic clonally-derived cell lines used in this manuscript, including RNA-sequencing, Whole Exome Sequencing, Cytogenomic Microarray Analysis, and analysis of gain-of-function phenotypes. Raw sequencing data that support the findings of this study have been deposited to the Sequence Read Archive under the BioProject accession number PRJNA669391.
DOI: 10.3535/x9d-px8-f7l
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7514234.v1
title: User satisfaction with complete dentures made by the public network of a city in southern Santa Catarina

description: OBJECTIVE: To assess user satisfaction with complete dentures made and delivered in 2010 by the public health care network of a city in the south of Santa Catarina. METHODS: This cross-sectional, observational, descriptive study used the Oral Health Impact Profile - 14 questionnaire to collect data. The questionnaire contains 14 questions on functional limitation, psychological discomfort, physical disability, psychological disability, social disability, physical pain, and disability. The survey was done in a city in the south of Santa Catarina. The participants were chosen randomly and kept anonymous. The sample consisted of 247 complete dentures made by the public health network of the city in 2010 for patients aged more than 50 years. RESULTS: Based on the social and psychological questions, the upper complete denture have a small effect on the patient's quality of life, while the lower complete denture causes stress, self-consciousness, physical pain, and mastication problems. Therefore, the most severe problems were caused by lower complete dentures. CONCLUSION: Denture follow-up protocols should be created to minimize the damages they cause to patients' health and to reduce treatment loss.
DOI: 10.3535/f6x-dfp-f2h
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jt5-2nz-f0k
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nf2-3m5-jbp
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1wk-c9t-bk6
title: †Ectenoglossa Sinclair, 1945

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s5m-z73-p3x
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1309500.v5
title: Field observations of bedrock channels scoured by debris flows

description: File set including (1) .zip file of photos from debris flow sites, (2) .kml file showing locations of sites, (3) .pdf describing the debris flow sites. View the gallery at https://sites.google.com/site/lhsu000001/debris-flow-sites-gallery.
DOI: 10.15468/dl.z8ywuk
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 "TaxonKey is Fusarium torreyae T.Aoki, J.A.Sm., L.L.Mount, Geiser & O'Donnell"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009556-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/7yx-fep-ced
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ck6-f1f-pye
title: †Ectenoglossa Sinclair, 1945

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r4m-t5d-a75
title: †Ectenoglossa Sinclair, 1945

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fhj-9q6-xcy
title: †Ectenoglossa Sinclair, 1945

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h0f-erx-nql
title: Lingulidae Menke, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5255554.v1
title: right femoral vein csa - data set.xls

description: <br>We determined the CSA of the right femoral vein in three different leg positions at two distances from the inguinal ligament. <br> CSA measurements in three leg positions: abduction, abduction+external rotation, abduction+external rotation+90º knee flexion/frog-leg position; at levels 20 mm caudally to the inguinal ligament, and 20 mm caudally to the inguinal crease.
DOI: 10.3535/t3y-h36-v8m
title: †Ectenoglossa Sinclair, 1945

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/f5gsd4gh42
title: Data for: The forecasting power of EPU for crude-oil return volatility

description: Blent.xlsx is the crude oil prices drives the Brent crude oil volatility. EPU.xlsx is the EPU data of our collected.OVX.xlsx is the Crude Oil Volatility index data.
DOI: 10.17632/w9hg2mnnwy
title: Multispeed lattice Boltzmann method with ab initio scattering rates for phonon non-equilibrium thermal analysis in GaN heterostructures

description: These files contain the phonon dynamics parameter data for GaN, AlN, Si, and Diamond used to support the study "Multispeed Lattice Boltzmann Method with Ab Initio Scattering Rates for Phonon Non-Equilibrium Thermal Analysis in GaN Heterostructures." The data includes ShengBTE calculation results, sampled data based on the phonon frequency discretization scheme, and relevant MATLAB code.
DOI: 10.3535/ac4-75c-y79
title: †Ectenoglossa Sinclair, 1945

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kgl-bbk-ft2
title: †Ectenoglossa Sinclair, 1945

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5t8-wbe-yq8
title: †Ectenoglossa Sinclair, 1945

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/y872vkmbmj
title: Host cell amplification of nutritional stress contributes to persistence in Chlamydia trachomatis

description: Chlamydial starvation of distinct nutrients produce a superficially similar persistent state, implying convergence on a common intracellular environment. We employed host-pathogen dual RNA-sequencing under both iron- and tryptophan-starved conditions to systematically characterize the persistent chlamydial transcriptome and to define common contributions of the host cell transcriptional stress response in shaping the intracellular environment. The transcriptome of the infected host cells was highly specific to each nutritional stress, despite comparable effects on chlamydial growth and development in each condition. In contrast, the chlamydial transcriptomes between nutritional conditions were highly similar, suggesting some overlap in host cell responses to iron limitation and tryptophan starvation that contribute to a common persistent phenotype. We demonstrate that a commonality in the host cell responses is the suppression of guanosine triphosphate (GTP) biosynthesis, a nucleotide for which Chlamydia are auxotrophic. Host cell reduction in GTP levels amplifies the nutritional stress to intracellular chlamydiae in infection-relevant models of persistence, illustrating the determinative role the infected host cell plays in bacterial stress responses.
DOI: 10.3535/6sw-dfe-a2d
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jvy-8rf-bg9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/db894kv5b4
title: Anthropogenic and plastic litter on the coasts of the south-eastern part of the Baltic Sea

description: Beach pollution by marine litter, especially plastic products and their fragments, is influenced by intensive recreational use, coastal development, fishing and shipping. These plastic products have exceptionally long degradation times in the natural marine environment. 
Monitoring surveys show the presence of different types of litter on beaches. Anthropogenic litter, which includes natural litter such as wood chips, cones, wood fragments, amber, feathers, seaweed, glass, ceramics, charcoal and plastic litter.
Monitoring was carried out at five city and village beaches on the Baltic coast of Kaliningrad: (1) Yantarny beach, (2) Baltiysk beach, (3) Baltic (Vistula) Spit beach, (4) Zelenogradsk beach - the root of the Curonian Spit, (5) Kurshskaya Spit National Park beach near the village of Morskoye.
The assessment was carried out according to the widely used OSPAR (OSPAR, 2010) method (data are presented in tables). The OSPAR method defines nine parent categories (plastic, rubber, textile, paper, wood, metal, glass, sanitary and medical products) and 110 specific item categories, with the possibility of recording unlisted items. Frequently encountered (&gt;30 times) unrecorded items are added to the item list for future rounds of measurements. Samples found were visually inspected and categorised by the researcher (anthropogenic and plastic). All litter found was weighed on the beach and transported to the laboratory (except for large items). In the laboratory, the plastic litter was dried and weighed again (the results of the weighing are given in the tables).
Tables structure:
Аnthropogenic items- number of pieces of non-plastic litter (metal, ceramic, glass, etc.) including those of natural origin (wood, amber, ets);
 S - area of the part of the beach where monitoring was carried out;
Anthropogenic items/m2- the number of samples found in relation to the area of the beach where the monitoring was carried out;
Weight of anthropogenic litter, g- weight of dry anthropogenic litter;
Anthropogenic litter, gDw/m2- litter dry weight divided by the area of the beach surveyed; Weight of plastic litter, g- weight of dry plastic litter;
Plastic litter, gDw/m2- litter dry dry plastic litter to the area of the surveyed beach;
Plastic items- number of pieces of plastic litter;
Plasticitems/m2- number of items found in relation to the area of the beach surveyed.
DOI: 10.17632/kwm67rxcs6
title: A study of the effects of different animations on germane cognitive load during intangible cultural heritage instruction

description: data for the GCL experiment.
DOI: 10.3535/7fz-0mt-9m1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/saw-g9a-fny
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x2p-exe-fmc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/56z-5fs-t08
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/80e-lw6-akz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/tnvbfzgy65
title: ALOHA: Automatic libraries of helicity amplitudes for Feynman diagram computations

description: Abstract We present an application that automatically writes the Helas (HELicity Amplitude Subroutines) library corresponding to the Feynman rules of any quantum field theory Lagrangian. The code is written in Python and takes the Universal FeynRules Output (Ufo) as an input. From this input it produces the complete set of routines, wave-functions and amplitudes, that are needed for the computation of Feynman diagrams at leading as well as at higher orders. The representation is language independent a... Title of program: ALOHA Catalogue Id: AEMS_v1_0 Nature of problem An effcient numerical evaluation of a squared matrix element can be done with the help of the helicity routines implemented in the HELAS library [1]. This static library contains a limited number of helicity functions and is therefore not always able to provide the needed routine in the presence of an arbitrary interaction. This program provides a way to automatically create the corresponding routines for any given model. Versions of this program held in the CPC repository in Mendeley Data AEMS_v1_0; ALOHA; 10.1016/j.cpc.2012.05.004 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.3535/5cy-vsy-722
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mb6-h29-r1l
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rzc-g81-d9q
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3751553_d46.v1
title: Additional file 51: of The protein subunit of telomerase displays patterns of dynamic evolution and conservation across different metazoan taxa

description: Multiple sequence alignment of the N-terminal linker region in molluscs. (FASTA 159 bytes)
DOI: 10.3535/4bl-he8-2v3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xw7-ssd-176
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5036177.v2
title: Dataset for the paper SocialPreferences Financial Literacy And Intertemporal Choice

description: Dataset for the paper Social Preferences, Financial Literacy and Intertemporal Choice
DOI: 10.3535/rd1-569-hwb
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1591045.v3
title: The Affects of Competition for Resources and Sunlight Exposure on Plantago major (Common Plantain) Leaf Size At York University

description: The dataset was collected on two separate days, it was collected on Monday October 19th, 2015. and Monday October 26th, 2015. The sampling took place at Danby grassland at York University in Toronto, Ontario between 3:00- 5:00pm. The weather conditions of the location on both days was windy and sunny and the temperature ranged from 10-14 degrees celsius. The experiment was done in groups of 4 which included Aziza, Sahar, Paula and Shahana. The purpose of this experiment was to observe if competition and distribution of resources, among plants affects plant size by using different sampling techniques. This experiment consisted of recording average leaf size, crowding, number of Common Plantain plants, total number of leaves, number of leaves in sunlight and sunlight percentage. The plant was identified by its oval leaves and a quadrat was used to sample the distribution of Common Plantain plants. The quadrat was placed randomly on the grassland 70 times on the first day and another 70 times on the second day. A total of 140 replicates was collected on both days. For each plant, the size of the leaves was determined by measuring from where the stem attaches to the leaf of the plant to the tip of the leaf. This was measured in inches using a measuring tape and the leaf sizes were averaged for each plant being observed. Crowdedness of the plant was determined by observing the amount of other plant species surrounding the Common Plantain. A scale was used which was 0=no other plant species, 1=very little plant species, 2= quite a lot of other plant species and 3= lots of other plant species. Sunlight exposure which was a percentage was determined for each individual plant, by dividing the number of leaves exposed to sunlight by the total number of leaves. This was then multiplied by 100 to get a percentage. There was not a large abundance of Common Plantain plants at the location which is why for some of the replicates there was no data. Low temperatures could have played a role which limited the abundance of Common Plantain in the grassland.
DOI: 10.3535/6v6-ek9-wxn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ge4-9dn-0nd
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.11583/dtu.9963614.v1
title: Data for "Particle-in-cell simulations of parametric decay instabilities at the upper hybrid layer of fusion plasmas to determine their primary threshold"

description: The data needed to generate figures 5-18 of the article Particle-in-cell simulations of parametric decay instabilities at the upper hybrid layer of fusion plasmas to determine their primary threshold. / Senstius, Mads Givskov; Nielsen, Stefan Kragh; Vann, R. G.; Hansen, Søren Kjer.In: Plasma Physics and Controlled Fusion, 2019. https://doi.org/10.1088/1361-6587/ab49ca<br>
DOI: 10.3535/ngw-8rh-qz2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1566821.v1
title: Diversity of Insects within the Grasslands using a Quadrant

description: During this lab, the abundance of species within a quadrant either placed in mowed grass or unmowed grass were observed. This took place in grasslands which is occupied by fairly short grass and also contains many plants and large amounts of evenly grown grass. The objective was to place our quadrants in areas that contained mowed grass and unmowed grass, and upon doing so, an overall count of the number of species contained within this area. After using the quadrant approximate ly six times iin the mowed and unmowed grass, you begin to realize the diversity of species is a lot more abundant in the unmowed grass and this may be due to the approximattity of the plant and animal species to one another as compared to the unmowed grass. The quandrant measures 1m x 1m and they are observed for a period of 3 minutes and after taking the data needed, the quadrant is placed in a location 3 meters away form where it was before.and this is done a total of six times on unmowed grass and mowed grass.
DOI: 10.6084/m9.figshare.26689211.v1
title: Additional file 1 of tRigon: an R package and Shiny App for integrative (path-)omics data analysis

description: Additional file 1. tRigon session report in html-format for a k-means clustering analysis including all inputs, setting options and outputs.
DOI: 10.17632/c7w26zw4x3
title: Cross section pictures of the square specimens under torsional cyclic loads with longitudinal initial crack

description: The response of the materials under the action of cyclic loads is always a topic of interest of the engineers and researchers. In this dataset is showed the results for the torsional fatigue test of the square cross section specimens. A longitudinal crack was induced in one face. The specimen material is AISI 1015 steel. Fatigue test was realized in the torsional testing machine described in the literature. The asymmetry ratio used was -1. It is showed the crack size ai respect to the number of cycles Ni and pictures of the cross section after the failure.
DOI: 10.3535/2b4-hsr-xhp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fbw-vct-xas
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/3fk3p77c8b
title: Data for: Data regarding the sensibility to proteolysis of a natural apolipoprotein A-I mutant

description: proteolysis of a natural apolipoprotein A-I mutant
DOI: 10.17632/xwytwmfrs7
title: SaX: An open source package for electronic-structure and optical-properties calculations in the GW approximation

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We present here SaX (Self-energies and eXcitations), a plane-waves package aimed at electronic-structure and optical-properties calculations in the GW framework, namely using the GW approximation for quasi-particle properties and the Bethe–Salpeter equation for the excitonic effects. The code is mostly written in FORTRAN90 in a modern style, with extensive use of data abstraction (i.e. objects). SaX employs state of the art techniques and can treat large systems. The package is released with ... Title of program: SaX (Self-energies and eXcitations) Catalogue Id: AEDF_v1_0 Nature of problem SaX is designed to calculate the electronic band-structure of semiconductors, including quasi-particle effects and optical properties including excitonic effects. Versions of this program held in the CPC repository in Mendeley Data AEDF_v1_0; SaX (Self-energies and eXcitations); 10.1016/j.cpc.2009.02.005
DOI: 10.3535/75x-y0b-kd0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25736829.v1
title: ROS

description: Confocal scanning microscopy of reactive oxygen species results
DOI: 10.3535/5bc-jbn-pkz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hs8-7sf-snl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2xf-7yk-wwd
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j8k-ep0-fcb
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16723069.v1
title: finaldata2.dta

description: Data from the IPUMS-NHIS limited to women with breast cancer diagnosis
DOI: 10.3535/7dy-3xx-g42
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p2k-l6q-vs8
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.