cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6189542.v1
title: Lecina-Diaz_et_al_2018_carbon_biodiversity.zip

description: Data of the article Judit Lecina-Diaz, Albert Alvarez, Adrián Regos, Pierre Drapeau, Alain Paquette, Christian Messier and Javier Retana. 2018. The positive carbon stocks - biodiversity relationship in forests: co-occurrence and drivers across five sub-climates. Ecological Applications.<br>2018-04-26<br>The following files included:<br>1) "table2_linear_models.csv" Cell data used to produce table 2 in the above publication. An explanation of the variable and units is included in methods section and Figure 2 of the publication.<br>2) "hotspots_carbon_birds_climates.csv"Cell data of hotspots and coldspots for carbon stocks and bird richness within the sub-climates studied (sub-climate delimitation, Figure S2A). Variables to compute the multinomial logistic models in table S4 are also included.<br>3) "hotspots_carbon_birds_regions.csv"Cell data of hotspots and coldspots for carbon stocks and bird richness within the regions studied (Figure 4A). Variables to compute the multinomial logistic models in table S4 are also included.<br>4) "hotspots_carbon_trees_climates.csv"Cell data of hotspots and coldspots for carbon stocks and tree richness within the sub-climates studied (sub-climate delimitation, Figure S2B).Variables to compute the multinomial logistic models in table S5 are also included.<br>5) "hotspots_carbon_trees_regions.csv"Cell data of hotspots and coldspots for carbon stocks and tree richness within the regions studied (Figure 4B).Variables to compute the multinomial logistic models in table S5 are also included.<br>6) "hotspots_carbon_overallbiodiv_climates.csv"Cell data of hotspots and coldspots for carbon stocks and overall biodiversity within the sub-climates studied (sub-climate delimitation, Figure S2C).Variables to compute the multinomial logistic models in table S6 are also included.<br>7) "hotspots_carbon_overallbiodiv_regions.csv"Cell data of hotspots and coldspots for carbon stocks and overall biodiversity within the regions studied (Figure 4C).Variables to compute the multinomial logistic models in table S6 are also included.
DOI: 10.6084/m9.figshare.26049157.v1
title: Supplementary Material for: Epidemiology of renal replacement therapy for critically ill patients across seven health jurisdictions

description: Introduction: Acute kidney injury (AKI) requiring treatment with renal replacement therapy (RRT) is a common complication after admission to an intensive care unit (ICU) and is associated with significant morbidity and mortality. However, the prevalence of RRT use and the associated outcomes in critically patients across the globe are not well described. Therefore, we describe the epidemiology and outcomes of patients receiving RRT for AKI in ICUs across several large health system jurisdictions. 
Methods: Retrospective cohort analysis using nationally representative and comparable databases from seven health jurisdictions in Australia, Brazil, Canada, Denmark, New Zealand, Scotland, and the United States (USA) between 2006-2023, depending on data availability of each dataset. Patients with history of end-stage kidney disease receiving chronic RRT and patients with a history of renal transplant were excluded. 
Results: A total of 4,104,480 patients in the ICU cohort and 3,520,516 patients in the mechanical ventilation cohort were included. Overall, 156,403 (3.8%) patients in the ICU cohort and 240,824 (6.8%) patients in the mechanical ventilation cohort were treated with RRT for AKI. In the ICU cohort, the proportion of patients treated with RRT was lowest in Australia and Brazil (3.3%) and highest in Scotland (9.2%). The in-hospital mortality for critically ill patients treated with RRT was almost four-fold higher (57.1%) than those not receiving RRT (16.8%). The mortality of patients treated with RRT varied across the health jurisdictions from 37-65%.
Conclusion: The outcomes of patients who receive RRT in ICUs throughout the world vary widely. Our research suggests differences in access to and provision of this therapy are contributing factors.
DOI: 10.6084/m9.figshare.27873186.v3
title: Supplementary Material for: Metastatic Patterns: Insights from Japanese Pathological Autopsy Registry Analysis

description: Introduction: Understanding the metastatic patterns is crucial for the treatment of malignancies. This study aimed to identify the characteristic organ metastases of primary malignancies, including rare malignancies, and classify them according to their metastatic patterns.
Methods: We extracted data on primary malignancies and organ metastases from the Annual of Pathological Autopsy Cases in Japan recorded in 1993–2021. Autopsy findings of the primary and metastatic organs in patients with malignancy were recorded on an organ–by–organ basis. The metastatic frequency (number of metastases per autopsy) and the proportion (percentage of organs with metastases out of the total in a primary malignancy) for 48 organ metastasis sites across 76 primary malignancies were calculated. Metastatic patterns were classified into hierarchical and non-hierarchical clustering classifications based on the standard proportion of organ metastases.
Results: A total of 332,195 autopsy cases and 810,206 organ metastases were analyzed. The metastatic frequency of all malignancies was 2.44. Malignancies of the placenta, eye, and ovary showed a higher propensity for metastasis, whereas central nervous system malignancies showed a lower tendency. Metastasis site was a characteristic of each malignancy, with a particularly high proportion of lung metastasis in parathyroid malignancy and bone metastasis in prostate malignancy. In the hierarchical and non–hierarchical cluster methods, brain, lung, liver, bone, peritoneum, and hematolymphoid organ were key metastatic sites, and this factor divided primary malignancies into seven categories. The unweighted kappa coefficient comparing the two classification methods was 0.84 (95% confidence interval: 0.75–0.93). The proportion of metastatic organs was influenced by anatomical location and/or organ specificity of the primary malignancies.
Conclusion: Our study provides a comprehensive overview of the patterns and frequencies of metastatic organ sites associated with 76 primary malignancies. Our findings will provide useful information for future research and clinical practice.
DOI: 10.6084/m9.figshare.13653281.v2
title: Source Data 7

description: <b>Source Data 7. </b>Pathways overrepresented in Large Clusters for six theta. Clusters that contains 15 genes or more are only considered in this analysis.
DOI: 10.17632/3ppd6kv2nh
title: Data for: Prevalence of Left Ventricular Non-Compaction Cardiomyopathy Pattern Among Patients with Congenital Dyserythropoietic Anemia Type 1 (CDA1) - Cardiac Magnetic Resonance Study
DOI: 10.17632/zpy3rsb7kb
title: Climate Change, Energy Security and Agriculture: Evaluating Ecosystem Services, Renewable Energy Integration and Socioeconomic Impacts through a Global SWOT Analysis

description: Raw data and codes for the research paper.
DOI: 10.6084/m9.figshare.3412192.v1
title: Reducing PAPR of OFDM Using PTS Techniques for Different Number of Sub-blocks

description: Orthogonal Frequency Division Multiplexing (OFDM) technology promises to be a key technique for achieving the high data capacity and spectral efficiency requirements for wireless communication system of the near future. Peak to average power ratio (PAPR) is a major drawback of multicarrier transmission system which leads to reduce the efficiency of Radio Frequency (RF) amplifiers and increase the complexity in the analog to digital and digital to analog conversion. In this paper, we present PAPR reduction on Partial Transmit Sequences (PTS) method using different number of sub-blocks. Simulation result shows that the PAPR reduces when the numbers of subblocks are increases.
DOI: 10.17632/s6nkvfy6y4
title: Data for: Female participation in MOOCs in the IT area

description: This csv dataset has anonymous data from (mostly) brazilian students, collected (with permission) from Lúmina, from 4 MOOC. It has the following columns: [1] "url" "forum" "pesquisa" "questionario" [5] "pagina" "certificado" "total.acoes" "inicio" [9] "final" "pais.origem" "tempo.curso.minutos" "sexo" [13] "idade" "escolaridade" "gosta" "motivo" [17] "intencao" "curso" "concluidas" "razao" [21] "nota"
DOI: 10.6084/m9.figshare.4294073.v3
title: Top 100 2016 - article and affiliations data

description: Full data for the articles and affiliations from the Altmetric Top 100 2016.
DOI: 10.6084/m9.figshare.13372286.v1
title: data50.mat

description: Raw phase data used for computing neurite and soma mass<br>
DOI: 10.17632/kjp99ctwrh
title: Data：Generational Engagement in Rural Revitalization A TPB-SEM Analysis of Chinese Youth with Evidence from Zhejiang Province

description: The research data were obtained from a multi-stage sampling survey conducted in Zhejiang Province during July-August 2024. The research team refined the questionnaire design through a pre-survey involving 50 youths each from Hangzhou and Ningbo. The formal investigation utilized stratified random sampling, with sample sizes allocated proportionately across 11 prefecture-level cities based on population data from China’s Seventh National Population Census (2020), while controlling for gender, generational cohort (Y/Z generations), and urban-rural distribution. Ultimately, 1,211 youths were randomly selected from 44 counties (cities/districts), yielding 1,119 valid questionnaires (92.40% recovery rate), including 620 from Gen Z and 499 from Gen Y. Data analysis indicated that Gen Y demonstrated significantly higher willingness to participate compared to Gen Z (63.93% vs. 53.23%).
DOI: 10.6084/m9.figshare.19499558.v1
title: patches and local annotations, slide 054, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.24772890.v1
title: Supplementary Material for: C-X-C motif chemokine ligand 1 promotes colitis by modulating the gut microbiota

description: Introduction: C-X-C motif chemokine ligand 1 (CXCL1) is a potent neutrophil chemoattractant that plays a pivotal role in recruiting neutrophils during inflammatory conditions. This study explored the role of CXCL1 in modulating the gut microbiota, influencing neutrophil infiltration, and contributing to the development of colitis. 
Methods: We employed quantitative PCR to assess CXCL1 expression in colon samples. A mouse model of DSS-induced colitis was utilized to explore the progression of colitis in wild-type (WT) and CXCL1-deficient (CXCL1-/-) mice. 
Results: Colitis attenuation was evident in CXCL1-/- mice. Significant alterations were observed in the gut microbiome, as revealed by 16S rRNA gene sequencing. Furthermore, CXCL1-/- mice exhibited reduced gut permeability and diminished endotoxin levels in peripheral blood following DSS treatment compared to WT mice. In response to DSS treatment, WT mice showed a clear increase in neutrophil infiltration, while CXCL1-/- mice exhibited lower levels of infiltration. FMT using stools from CXCL1-/- mice alleviated DSS-induced colitis. Interestingly, FMT from patients with colitis increased CXCL1 and Ly6G expression in colons of gut-sterilized mice. Clinical data analysis revealed elevated CXCL1 and CD15 expression in patients with colitis, with a positive correlation between the severity of colitis and the expression of CXCL1 and CD15. 
Conclusion: These findings shed light on the pivotal role of CXCL1 in promoting colitis by modulating the gut microbiota.
DOI: 10.6084/m9.figshare.967858.v1
title: Zarządzanie wartością przedsiębiorstwa na przykładzie organizacji X,Y,Z.

description: Celem niniejszej pracy jest analiza odpowiednich wskaźników trzech jednostek w celu oceny zarządzania wartością przedsiębiorstw. Wybrane podmioty to organizacja nonprofit, instytucja finansowa oraz przedsiębiorstwo nie będące organizacją nonprofit lub instytucją finansową. Dane potrzebne do oceny instytucji pochodzą ze sprawozdań finansowych z lat 2009 – 2011.
DOI: 10.6084/m9.figshare.25353301.v1
title: Wide scope funder data

description: Research into canine health and welfare is supported by Government, charitable and private UK funding organisations. However, there is no current overall visibility or coordination of these funding activities, potentially compromising optimal distribution of limited resources. This study aimed to survey UK canine health and welfare funding by not-for-profit funders between 2012 and 2022, providing a novel baseline analysis to inform future sector stakeholder priorities. This dataset comprises the wide-scope (UK Research Council organisations and Wellcome Trust) grants featured in the paper.
DOI: 10.6084/m9.figshare.14958312.v1
title: Data and code from "Abiotic and biotic drivers of functional diversity and functional composition of bird and bat assemblages along a tropical elevation gradient"

description: This package contains data of community composition and functional traits of birds and bats along a 3.7 km elevational gradient across 13 major ecosystem types on Mt. Kilimanjaro, Tanzania.<br>Along with the raw data we provide R code to reproduce the analysis from the paper. For details about how to run the R code please have a look at the README file in the package. For details about the methods (e.g., field sampling or background of particular analyses) we refer to the original publication.<br>
DOI: 10.6084/m9.figshare.20043708.v1
title: Cephalometric variables used to predict the success of interceptive treatment with rapid maxillary expansion and face mask. A longitudinal study

description: INTRODUCTION: Prognosis is the main limitation of interceptive treatment of Class III malocclusions. The interceptive procedures of rapid maxillary expansion (RME) and face mask therapy performed in early mixed dentition are capable of achieving immediate overcorrection and maintenance of facial and occlusal morphology for a few years. Individuals presenting minimal acceptable faces at growth completion are potential candidates for compensatory orthodontic treatment, while those with facial involvement should be submitted to orthodontic decompensation for orthognathic surgery. OBJECTIVES: To investigate cephalometric variables that might predict the outcomes of orthopedic treatment with RME and face mask therapy (FM). METHODS: Cephalometric analysis of 26 Class III patients (mean age of 8 years and 4 months) was performed at treatment onset and after a mean period of 6 years and 10 months at pubertal growth completion, including a subjective facial analysis. Patients was divided into two groups: success group (21 individuals) and failure group (5 individuals). Discriminant analysis was applied to the cephalometric values at treatment onset. Two predictor variables were found by stepwise procedure. RESULTS: Orthopedic treatment of Class III malocclusion may have unfavorable prognosis at growth completion whenever initial cephalometric analysis reveals increased lower anterior facial height (LAFH) combined with reduced angle between the condylar axis and the mandibular plane (CondAx.MP). CONCLUSION: The results of treatment with RME and face mask therapy at growth completion in Class III patients could be predicted with a probability of 88.5%.
DOI: 10.6084/m9.figshare.12073596.v2
title: South African Hospital Beds

description: These files were created from https://figshare.com/articles/SURGICAL_RESOURCES_latestmarch2016_xlsx/12066711. Hospital capacity information were extracted and tidied up. The readme explains the steps taken to go from the original data to the tidy data.<br># Note: Readme was updated to be more descriptive and in cleaner format on 3 April 2020<br>
DOI: 10.6084/m9.figshare.14988489.v3
title: Updating the Chieti Affective Action Videos database with older adults

description: Validation of the Chieti Affective Action Videos (CAAV) database was replicated with a sample of older adults (age range 65-93). When designing experimental studies of emotions, it is crucial to take into consideration the differences in emotional processing between young and older adults. Therefore, the main goal of the present study was to provide an appropriate dataset for the use of CAAV in aging research. For this reason, the CAAV administration and the data collection methodology was faithfully replicated in a sample of 302 older adults. All the 360 standardized stimuli were evaluated on the emotional dimensions of valence and arousal. The CAAV validation in an older adults’ population increases the potential use of this innovative tool. The present validation supports the use of the CAAV database in future experimental studies on cognitive functions in healthy and pathological aging.<br>All the video stimuli are available on the following link: <b>https://springernature.figshare.com/articles/dataset/CAAV_database/11215067?backTo=/collections/Chieti_Affective_Action_Video_-_CAAV_Technical_Manual_and_Affective_Rating/4691840</b>
DOI: 10.17632/nykdgbp5zt
title: Exploring AI and Ethics in GCC's Education Sector: A Bibliometric Study

description: Search Query
( TITLE-ABS-KEY ( artificial AND intelligence ) OR TITLE-ABS-KEY ( ai ) AND TITLE-ABS-KEY ( ethics ) OR TITLE-ABS-KEY ( ethic ) AND TITLE-ABS-KEY ( education ) OR TITLE-ABS-KEY ( academia ) OR TITLE-ABS-KEY ( learning ) ) AND ( LIMIT-TO ( AFFILCOUNTRY , "United Arab Emirates" ) OR LIMIT-TO ( AFFILCOUNTRY , "Saudi Arabia" ) OR LIMIT-TO ( AFFILCOUNTRY , "Qatar" ) OR LIMIT-TO ( AFFILCOUNTRY , "Bahrain" ) OR LIMIT-TO ( AFFILCOUNTRY , "Oman" ) OR LIMIT-TO ( AFFILCOUNTRY, "Kuwait" ) ) AND ( LIMIT-TO ( LANGUAGE , "English" ) )
DOI: 10.6084/m9.figshare.9037382.v3
title: Figure 1 (Flotillins promote T cell receptor sorting through a fast Rab5-Rab11 endocytic recycling axis)

description: Raw image files for Figure 1.
DOI: 10.17632/c2frwwb26z
title: Concentration data for: Soil pollution at a major West African E-waste recycling site: contamination pathways and implications for potential mitigation strategies

description: All concentrations are given on a dry soil weight basis. Concentrations of organic pollutants are given in ng/g, concentrations of metals in ug/g and the organic carbon content is given in g/g. Concentrations below the detection limit were replaced by 0.5 * MDL (refer to the Supplementary Information for details). A concentration of zero means that the compound could not be quantified because of interferences. Zero-values should therefore be excluded from statistical analyses.
DOI: 10.6084/m9.figshare.12686621.v1
title: Micronuclear genome and macronuclear transcriptome with annotation, of marine tintinnid ciliate Schmidingerella arcuata (Spirotrichea).

description: The files above are associated with the following publication:<br><br><b>­Combined genome and transcriptome analyses of the ciliate </b><i>Schmidingerella arcuata</i><b> (Spirotrichea) reveal patterns of DNA elimination, scrambling, and inversion<br></b><br> in Genome Biology and Evolution<b> </b><b> </b>Susan A. Smith<sup>1</sup>*, Xyrus X. Maurer-Alcalá<sup>2</sup>, Ying Yan<sup>3</sup>, Laura A. Katz<sup>3</sup>, Luciana F. Santoferrara<sup>1</sup><sup>,4</sup><sub>,</sub> George B. McManus<sup>1</sup><sup>1</sup>Department of Marine Sciences, University of Connecticut, Groton, USA<sup>2</sup>Institute of Cell Biology, University of Bern, Bern, Switzerland<sup>3</sup>Smith College, Department of Biological Sciences, Northampton, Massachusetts, USA<sup>4</sup>Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, USA<b>*</b>Author for Correspondence: Department of Marine Sciences, University of Connecticut, Groton, USA, susan.smith@uconn.edu<br><br><em>Genome Biology and Evolution</em>, evaa185, https://doi.org/10.1093/gbe/evaa185Published: 01 September 2020<br><br>_____________________________________These files are associated with the following Bioprojects and accession numbers on Genbank.<br><br><b>Bioproject PRJNA626068</b> : Genome and transcriptome of marine ciliate Schmidingerella arcuata (TaxID: 1229734) <b>Biosample SAMN14615214</b>: <i>Schmidingerella arcuata,</i> macronuclear transcriptome (TaxID: 1229734)<b>TSA (Transcriptome assembly) GISN00000000: </b><i>Schmidingerella arcuata,</i> macronuclear transcriptome<b></b><b>Biosample SAMN14615117:</b> <i>Schmidingerella arcuata</i>, micronuclear genome, partial <br>(TaxID: 1229734)<b>SRA (Sequence Read Archive) SRR11933493</b>: Genome and transcriptome of marine ciliate <i>Schmidingerella arcuata</i><i><br></i><i><br></i><br>
DOI: 10.6084/m9.figshare.17032127.v2
title: Microbial traits determine soil C emission in response to fresh carbon inputs in forests across biomes

description: Comparative analysis of the relative abundance (% ) and number of microbial species and carbon decomposition-selected genes among these latitude range of forest soils. Different letters indicate significant differences (ANOVA, P &lt; 0.05, Tukey’s HSD post-hoc analysis) among different forest soils.
DOI: 10.6084/m9.figshare.20372232.v2
title: Anaulus and Asterionellopsis

description: Molecular dataset composed of alignments and bayesian phylogenetic trees used to identify species of <i>Anaulus </i>and <i>Asterionellopsis </i>(diatoms) from Brazil in the manuscript: <b>Surf-diatoms from sandy beaches on the Eastern Coast of South America (Brazil</b><b>): the identification of </b><i><b>Anaulus </b></i><b>E</b><b>hrenberg and </b><i><b>Asterionellopsis </b></i><b>Round </b>published in <b>Botanica Marina. </b>DOI:10.1515/bot-2022-0067- Sequences deposited in Genbank were edited, aligned with the ClustalW algorithm in the MEGA-X Program.- These alignments were used to built the bayesian phylogenetic trees, the best-ﬁt model for each data matrix was estimated using the Akaike Information Criterion by the software JModeltest 2 and trees were built using the software MrBayes 3.2.3.- The alignments are in two formats (<b>.FAS</b> and <b>.NEXUS</b>) and were used as input to the Automatic Barcode Gap Discovery models for primary species delimitation (ABGD) and Assemble Species by Automatic Partitioning (ASAP).- The trees are in two formats: <b>.TRE</b> and <b>.NEXUS</b>. Trees composed of all sequences were used to understand the phylogenetic relationship between strains. While, trees composed only of haplotypes were used as input to the Poisson Tree Processes (PTP).<b>Funding</b><b>: </b>This work was supported by Brazilian funding agencies: CNPq Proc. 203883/2017-9; the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES) - Finance Code 001; Brazilian Long-Term Ecological Research: CNPq/CAPES/FAPERGS/BC – Fundo Newton/PELD nº 15/2016More details on alignments and trees in the file README_MolecularData
DOI: 10.6084/m9.figshare.26771938.v3
title: <b>Fast inference of large-scale air quality using a lightweight ensemble predictor</b>

description: data and codes
DOI: 10.6084/m9.figshare.26827954.v1
title: HRQOL qualitative data transcript

description: <br>Qualitative data (transcripts) for HRQOL study in Ghana