cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.6dmg25
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salsola kali L.",
 "Country is Iraq"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013085-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/xnbwy8s2gy
title: Datasets for Residential GSHP Analysis by Climate in the United States

description: This data captures climate information and HVAC energy use for a baseline prototype home and for a replacement alternative energy home. The baseline home is a traditional DX cooling/gas furnace system, and the alternate system is a geothermal heat pump. Cooling degree days (CDD), heating degree days (HDD) and relative humidity were gathered from historical weather data for 12 cities across the contiguous United States. Geothermal heat pump coefficients were generated as inputs to EnergyPlus simulation software. These heat pump coefficients are generated by compiling heat pump performance data from 5 market leading, high efficiency residential geothermal heat pump manufacturers. These coefficients can be used to represent a general, market available heat pump in 2-ton, 3-ton, and 4-ton capacities. Baseline prototype home energy use by city was generated by EnergyPlus using the prototype home download file from www.energy.gov and the respective weather file for that city. This data can be interpreted as energy use per month by certain HVAC components. The GSHP home energy use by city was generated from EnergyPlus and the respective city weather file. The GSHP model was created by the authors to model the alternate closed loop, GSHP system.
DOI: 10.17632/zwt3kwv4xk
title: Dataset for studying the coding of goals and actions in ventral and dorsal corticostriatal circuits 

description: This dataset is used in our study entitled "Differential coding of goals and actions in ventral and dorsal corticostriatal circuits during goal-directed behavior". It includes single-unit activities that were collected while monkeys were trained to perform a three-armed bandit reinforcement learning task.
Permission is required for using this dataset. Lead contact: Bruno B. Averbeck (bruno.averbeck@nih.gov).
DOI: 10.6084/m9.figshare.20092661.v1
title: Exploratory Factor Analysis Output.docx

description: Extended data for exploratory factor analysis and the questionnaire in English and Amharic versions.
DOI: 10.6084/m9.figshare.28903127.v2
title: Data of soil compaction

description: This is my experimental data. BD-1.2, BD-1.35, BD-1.5 represented data under soil bulk density conditions of 1.2 g cm<sup>-3</sup>, 1.35 g cm<sup>-3</sup>, and 1.5 g cm<sup>-3</sup>, respectively.A0, A1, A2, and A3 represented the amounts of iron tailings added at 0%, 5%, 10%, and 15%, respectively.S0, S1, S2, and S3 represented the amounts of straw added at 0%, 0.5%, 1%, and 1.5%, respectively.PC, CC, and RC were research indicators, representing the pre-compression stress, compressibility coefficient, and recovery coefficient, respectively.Mean and SE represent the mean values and standard error, respectively<br>
DOI: 10.6084/m9.figshare.14543481.v1
title: Sparse Prior

description: Learned sparse prior distribution (i.e., the set of basis function and mean vector of pixel valeus) we used in our analysis.
DOI: 10.6084/m9.figshare.3082180.v1
title: PNAS data on ecosystem functions tre communities and multifunctionality

description: Data on tree biodiversity (alpha and beta), abiotic conditions, heterogeneity, community composition and ecosystem multifunctionality in forest landscapes, associated with the PNAS manuscrpt entitled "Biotic homogenization can decrease landscape-scale forest multifunctionality"
DOI: 10.17044/scilifelab.13005311.v2
title: StratFreshDB v1.1

description: Stratified lakes and ponds that feature steep oxygen gradients are known to be significant net sources of greenhouse gases and hotspots in the carbon cycle. Despite their significant biogeochemical roles, the resident microbial communities, especially in the oxygen-depleted hypolimnetic compartments are poorly known. In this paper, we present a comprehensive metagenome dataset including shotgun metagenomes from 29 stratified lakes and 12 ponds mainly located in the boreal and subarctic regions but also including one reservoir from tropical Puerto Rico and one Swiss lake from the temperate zone. For most lakes and ponds, the data includes a vertical sample set spanning the oxic surface waters to anoxic bottom layers. In addition to the metagenomic sequences, the dataset includes environmental variables for the samples, such as oxygen, nutrient, and carbon concentrations. The dataset is ideal for further exploring the microbial taxonomic and functional diversity in freshwater environments and climate change impacts on the functioning of these ecosystems.<br>
DOI: 10.17632/399y2ckdcg
title: Description and analysis of Sigfox RSSI dataset by using statistical techniques

description: The data were acquired by using two sensors developed with Sipy and Pytrack boards, the geolocation prototypes are connected to Sigfox base stations generating a coverage map with a resolution of 200 meters among each measurement point, the device covers the largest area around a measurement point, sends the coordinates of latitude, longitude and altitude along with RSSI and LQI levels by the Sigfox network at different points, acquiring 5174 measurements.
DOI: 10.25381/cput.27723120.v1
title: Modelling and simulation of the cube satellite power systems

description: 2022FEBEREC-STD-~047The data is for mathematical modelling of the 3G30C AZURE SPACE CubeSat PV module using a two resistor-one diode model in MATLAB/Simulink. Two 3G30C AZURE SPACE modules fit on one out of four adjacent body sides of the CuceSAT. The top and the bottom sides are fitted with SPECTRLAB PV modules. The boost converter model is simulated for the worst-case scenario where only two adjacent body sides are exposed to the sun. Hence, only four AZURE SPACE modules are connected in parallel to form a 4x1 array, which supplies power to the boost converter. The boost converter specification data is given in Table 2.1, and the calculated component values are given in Table 2.2. This research project focuses on improving PV efficiency by optimising solar power generation through advanced Maximum Power Point Tracking (MPPT). The perturb and observe (PO) technique was initially tested but showed limitations under rapid environmental changes, causing power output oscillations. To address this, I explored AI-driven methods like Particle Swarm Optimisation (PSO) and developed a novel hybrid PO-PSO MPPT function, combining PO’s simplicity with PSO’s global search abilities. Simulations showed that the hybrid function significantly reduces oscillations, improves tracking under varying conditions, and stabilises power output more effectively than traditional techniques, providing a robust solution for CubeSat power management.
DOI: 10.6084/m9.figshare.27063505.v1
title: Supplementary materials

description: Supplementary materials of the paper "An ancient olive tree in the garden. Mapping the deep history of land use from a single image". Geocarto International, http://dx.doi.org/10.1080/10106049.2025.2471090.
DOI: 10.6084/m9.figshare.28651907.v2
title: Shared files for "Multiplexing of Cognitive Encoding by Oculomotor Networks Leads to Incidental Gaze Shifts" by Matthew C. Rosen and David J. Freedman, PNAS (2025) in press.

description: Please find here data used to generate the figures in Rosen and Freedman, PNAS (2025).
DOI: 10.6084/m9.figshare.21080476.v1
title: Supporting Data

description: Supporting data for reproducing the figures found in Nature Communication paper "Single-nuclei and bulk-tissue gene-expression analysis of pheochromocytoma and paraganglioma links disease subtypes with tumor microenvironment"
DOI: 10.6084/m9.figshare.26955886.v1
title: DepMap Predictability with Subsampling

description: These files contain a summary of predictability of CRISPRGeneEffect in Depmap 24Q2 with variable numbers of cell lines provided to the predictive model. Subsets of the CRISPR gene effect matrix were supplied to a random forest model and out of sample performance recorded. The prediction method is similar to that described in https://doi.org/10.1101/2020.02.21.959627, with equivalent code available at https://github.com/broadinstitute/cds-ensemble, commit c7dfcee. The cell lines used in each subset are specified in subsampled_cell_lines.txt.
DOI: 10.6084/m9.figshare.29152706.v1
title: Supplementary Material for: The Impact of the Selective Cytopheretic Device on Neutrophil-to-Lymphocyte Ratios and Hematological Parameters in AKI: A Pooled Analysis

description: Background: The Selective Cytopheretic Device (SCD) is an immunomodulatory cell-directed extracorporeal therapy that reprograms activated neutrophils and monocytes towards immune homeostasis in hyperinflammatory conditions such as acute kidney injury (AKI). However clinical mechanisms remain unclear.
Methods: We examined the effect of SCD treatment from prior AKI adult clinical studies on systemic inflammation through neutrophil-to-lymphocyte ratios (NLR) and other hematological measures to gain insights into the mechanism of the SCD. Linear-mixed effects regression was used to estimate differences in NLR and other hematological measures between SCD treated patients and controls over the first six days after initiating CKRT. 
Results: Hematological data were analyzed from 76 adult patients with AKI requiring continuous kidney replacement therapy (CKRT) treated with the SCD, and 32 CKRT only control patients. SCD reduced NLR across all individual studies through Day 6 of treatment, while the control group demonstrated upward trends in NLR past day 3. When analyzed as pooled groups, both cohorts displayed similar baseline NLRs (SCD = 23.6 vs. control = 21.7; p=0.636). SCD treated patients demonstrated a statistically significant reduction in NLR vs. control patients at Day 6 (SCD = 13.3 vs. control = 25.7 at day 6; ptrend = 0.011). This difference was maintained following sensitivity analysis upon exclusion of an ICU study due to a shorter follow-up period (SCD = 13.7 vs. control = 25.6; ptrend = 0.013). NLR reductions in the SCD group were driven by decreases in neutrophils and increases in lymphocytes. No statistically significant differences were observed between groups for monocyte-to-lymphocyte ratio (MLR) levels or platelets over the same treatment duration. 
Conclusions: In a pooled analysis of multiple AKI adult clinical studies SCD treatment demonstrated reductions in NLR. This analysis provides further clinical mechanistic evidence of leukocyte immunomodulation in targeting the dysregulation of effector immune cells in hyperinflammatory conditions such as AKI and sepsis.
DOI: 10.25442/hku.22300474.v1
title: Supporting Data for “Application of surface electromyography (sEMG) in investigating voice production”

description: This dataset supports the PhD thesis entitled “Application of surface electromyography (sEMG) in investigating voice production”. The thesis mainly incorporated three studies: (1) A pilot study aiming to determine the contributions of the perilaryngeal muscles in pitch and loudness change during phonation among vocally healthy populations. (2) A study (Main Study 1) aiming to investigate if sEMG could be used in identifying dysphonia. (3) A second study (Main Study 2) aiming to investigate whether sEMG could be used in identifying vocal fatigue. <br> This dataset includes the sEMG data involved in all three studies, with each study as a separate folder.
DOI: 10.6084/m9.figshare.20427696.v2
title: Nature-inspired search method and custom waste object detec-tion and classification model for smart waste bin

description: This is training dataset for YOLO
DOI: 10.6084/m9.figshare.25620969.v1
title: Tabla 7. Tasa de años vividos con discapacidad discriminada por sexo, grupo etario, departamento y en comorbilidad con tuberculosis, por 100.000 habitantes para los años del 2018-2022

description: Tabla 7. Tasa de años vividos con discapacidad discriminada por sexo, grupo etario, departamento y en comorbilidad con tuberculosis, por 100.000 habitantes para los años del 2018-2022
DOI: 10.6084/m9.figshare.5900152.v1
title: iMHEA Geographic Data

description: This file contains geographic data of the catchments including catchment delineation, sensor positions, drainage network, contour lines, lithology, land cover, and digital elevation. Data are organised by site and catchment.
DOI: 10.6084/m9.figshare.7716578.v1
title: Nesting material enrichment reduces severity of overgrooming-related self-injury in individually housed rats

description: Data underlying an observational study of the prevalence of overgrooming-related self-injury in individually housed rats and the effect of providing nesting material enrichment on the severity of associated lesions.<br>In Figure S1, we also show that individual housing of rats is prevalent in neuroscience research. We examined the research articles published in the Journal of Neuroscience in 2017 because the Journal of Neuroscience is the top neuroscience journal by eigenfactor. We found that for papers that reported using rats and reported housing conditions, approximately 55% used individual housing during experiments.<br>
DOI: 10.6084/m9.figshare.7908101.v1
title: gVCF_HG01892

description: 1000 Genomes gVCF mapped to hs37d5 for HG01892. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.6084/m9.figshare.9235142.v1
title: Excel macros and data example

description: Macros for organizing raw data from LabView software that logs timestamps for every rotation of a flight mill arms and then summarizes the time of individual flight bouts.
DOI: 10.17632/98mzk82wbb
title: Indian Sign Language Video and Text dataset for sentences (ISLVT)

description: This video and gloss-based dataset has been meticulously crafted to enhance the precision and resilience of ISL (Indian Sign Language) gesture recognition and generation systems. Our goal in sharing this dataset is to contribute to the research community, providing a valuable resource for fellow researchers to explore and innovate in the realm of sign language recognition and generation.Overview of the Dataset: Comprising a diverse array of ISL gesture videos and gloss datasets. The term "gloss" in this context often refers to a written or spoken description of the meaning of a sign, allowing for the representation of sign language in a written form. The dataset includes information about the corresponding spoken or written language and the gloss for each sign. Key components of a sign language gloss dataset include ISL grammar that follows a layered approach, incorporating specific spatial indices for tense and a lexicon with compounds. It follows a unique word order based on noun, verb, object, adjective, or part of a question. Marathi sign language follows the subject-object-verb (SOV) form, facilitating comprehension and adaptation to regional languages. This Marathi sign language gloss aims to become a medium for everyday communication among deaf individuals. This dataset reflects a careful curation process, simulating real-world scenarios. The original videos showcase a variety of gestures performed by a professional signer capturing a broad spectrum of sign language expressions. Incorporating Realism with green screen with controlled lighting conditions. All videos within this dataset adhere to pixels, ensuring uniformity for data presentation and facilitating streamlined pre-processing and model development stored in a format compatible with various machine and Deep learning frameworks, these videos seamlessly integrate into the research pipeline
DOI: 10.6084/m9.figshare.23500551.v1
title: Supplementary Material for: Cerebral sinus vein thrombosis following sneezing - Case Report

description: Cerebral sinus vein thrombosis (CVT) is a relatively rare neurovascular entity, usually associated with acquired or genetic hypercoagulable states, and in many cases it remains idiopathic. Trauma is also associated with CVT among patients with major head or neck trauma, including penetrating injuries. However, CVT associated with acceleration trauma has only been described in few cases so far. We present an unusual case of a 19-year-old woman with no past medical history, admitted with an extensive CVT following sneezing. A thorough investigation did not reveal any other potential etiology or risk factor other than estrogen-containing oral contraceptives. The patient was treated with anti-coagulation and improved clinically with complete recanalization on follow-up imaging. This case suggests acceleration trauma may be a potential factor of risk for CVT.
DOI: 10.6084/m9.figshare.28790816.v1
title: PNAS_2024-collagen.zip

description: Surprisingly, collagen – the predominant protein building block of our bodies – is inherently unstable at body temperature. Yet, it assembles into robust scaffolds that support tissues. This study investigates collagen’s thermal stability, with a particular focus on collagen type IV. Using AFM, we visualize unfolding of collagen at body temperature and identify sequence features that enhance its thermal resilience. We find that interchain disulfide bonds, including a conserved cystine knot, act as structural clamps that prolong the lifetime of folded structures and facilitate refolding in the N-to-C direction, opposite to the canonical folding pathway. Our findings contribute to our understanding of native collagen mechanics and metastability and have implications for advancing tissue engineering.
DOI: 10.6084/m9.figshare.3829971.v1
title: pairs.txt

description: Part of the LFW dataset used in scikit-learn.
DOI: 10.6084/m9.figshare.7642268.v1
title: Plasma protein biomarker measurements

description: Up to three replicates per protein per sample for 237 patients diagnosed with benign tumours, borderline or ovarian cancer stages I-IV. <br><br>Data has been generated in absolute concentrations with units given in the data file. <br><br>11 plasma protein biomarkers were quantified. <br>
DOI: 10.6084/m9.figshare.24270583.v1
title: MGWNB data and code

description: MGWNB data and code
DOI: 10.6084/m9.figshare.25814887.v1
title: Database of vascular plant species richness across a forest-grassland-desert transect in East Asia

description: We compiled a database of vascular plant species richness across a forest-grassland-desert transect in East Asia based on literature survey via Web of Science (https://www.webofscience.com/), the China National Knowledge Infrastructure (http://www.cnki.net) using different combinations of the keywords "Mongolia/ Greater Khingan Mountains/ Helan Mountains/ Alashan Desert" and "biodiversity/ species richness/ species diversity." We also derived data from Sabatini et al. (2022) which was mainly compiled from "sPlot" database (www.idiv.de/splot) (Bruelheide et al. 2019). Overall, the database includes 1512 observations of vascular plant species richness. Please find more information in the paper by Li and Du (2024) in Journal of Vegetation Science.
DOI: 10.17632/9rdmnn2x4x
title: Weighted Average Ensemble-Based Semantic Segmentation in Biological Electron Microscopy Images

description: This repository contains data for the Weighted Average Ensemble-Based Semantic Segmentation in Biological Electron Microscopy Images paper
DOI: 10.6084/m9.figshare.28423562.v1
title: PAA240k-AM Original data.rar

description: Included is the data file for publication in Nature Communication.
DOI: 10.6084/m9.figshare.1477012.v1
title: Survey about housing for the state of Idaho

description: The American Community Survey distributes downloadable data about United States communities. Download the 2006 microdata survey about housing for the state of Idaho using download.file() from here: https://d396qusza40orc.cloudfront.net/getdata%2Fdata%2Fss06pid.csv
DOI: 10.6084/m9.figshare.21359775.v1
title: UCR Archive 2018

description: The UCR archive from the original archive. The only difference is that I replaced some datasets with varying length with the provided padded versions of them.
DOI: 10.6084/m9.figshare.26384416.v2
title: Dataset and code

description: Related to the paper 'Spatio-Temporal Dynamics and Climate Change Scenarios Forecast of Dengue Incidence in Brazil'. Preprint available at: https://doi.org/10.1101/2024.07.22.24310334<br><br>This repository contains: <br>'dataset.csv': The database used for running the models in the cited paper.'data_dictionary.csv': The dictionary for the 'data.csv' file.<br><br>'models_script.R': outlining the commands and steps required for model construction, forecasting future outcomes, and conducting cross-validation metrics.
DOI: 10.6084/m9.figshare.28195157.v3
title: Escherichia coli wgMLST scheme.

description: Backup of the BioNumerics Escherichia coli wgMLST scheme.
DOI: 10.6084/m9.figshare.3514544.v1
title: Supplement 1. Data from the 83 South American lakes sampled.

description: File List South_American_Lakes_data.txt -- data file Description The "South American Lakes data file" contains data on 83 shallow lakes sampled in South America between November 2004 and March 2006. The following data is presented: X coordinate (Decimal degrees); Y coordinate (Decimal degrees); name (Name of the lake. Not all lakes have a name and some lakes are referred to by multiple names); climate zone (The lakes were grouped in five different categories based on the prevailing climate characteristics following the Köppen climate system (1936) digitized by Leemans and Cramer (1991): tropicali, tropical, subtropical, maritime temperate and tundra zone. The Köppen classification is based on monthly rainfall and temperature. Tropicali is an isothermal subzone in the tropics, which has a smaller annual temperature range than the tropical zone, source:<br> http://www.fao.org/WAICENT/FAOINFO/SUSTDEV/EIdirect/climate/EIsp0002.htm); average air temperature in warmest month (Celcius, source: M. New, D. Lister, M. Hulme, and I. Makin. 2002. A high-resolution data set of surface climate over global land areas. Climate Research 21. The complete paper can be freely downloaded via:<br> http://www.cru.uea.ac.uk/cru/data/tmc.htm); average air temperature in coldest month (Celcius, source: M. New, D. Lister, M. Hulme, and I. Makin. 2002: A high-resolution data set of surface climate over global land areas. Climate Research 21. The complete paper can be freely downloaded via:<br> http://www.cru.uea.ac.uk/cru/data/tmc.htm); soil type (Source: SOTERLAC "Soil and terrain database for Latin America and the Caribbean ", FAO: Land and Water Digital Media Series #5, scale: 1:5 million scale. Type of top soil and descriptions of the different types can be found at:<br> http://www.fao.org/AG/agl/agll/key2soil.stm); lake area (m<sup>2</sup>, determined using landsat Orthorectified Landsat Thematic Mapper Mosaics of the year 2000. If image was cloudy images of 1990 were used. In rare cases when image deviated much from area observed in the field, all waypoints measured in the field were plotted on top of the image and a "best matching" polygon was drawn around it, of which the area was determined); average depth (Meter, the average depth of the lake was determined using depth measurements from 20 random points and 20 points along transects perpendicular to the longest axis of the lake); altitude (Meter above sea level, based on DEM from gtopo30, converted to an Arcview grid using the procedure published on herpnet.org GTOPT_DEM); conductivity (µS/cm); Total nitrogen (mg/L); Total phosphorus (mg/L); chlorophyll <i>a</i> (µg/L) -- TABLE: Please see in attached file. --