cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.944559.v1
title: Cluster 20 - an example cluster from the ISS Timepix detector

description: This is a Comma Separated Value file containing pixel information from one of the Timepix detectors aboard the Internation Space Station. The data are arranged in columns of the pixel x coordinate, the pixel y coordinate, and the Time-over-Threshold (ToT) count from that pixel. Note that all metadata has purposefully stripped from this data in accordance with the usage conditions from NASA and the University of Houston. This data is to be used for analysis and demonstrations activities associated with <strong>CERN@school</strong>. To find out more, please visit the website below.
DOI: 10.6084/m9.figshare.27041776.v1
title: Porosity Map of Porites<i> </i>corals Skeletal Structure

description: Results are based on a micro-CT analysis using a three-phase segmentation (air, solid, and mixed-microporous). The data includes 30 fragments from different <i>Porites</i> coral colonies.
DOI: 10.6084/m9.figshare.25941193.v1
title: High methane production and emission from tropical seagrasses through methylotrophic methanogenesis

description: The data of CH<sub>4 </sub>and δ<sup>13</sup>C-CH<sub>4</sub> during incubation experiments and global CH<sub>4 </sub>emission rate. The data of CH<sub>4 </sub>and <sup>222</sup>Rn during a time series observation.
DOI: 10.6084/m9.figshare.1015640.v1
title: Odor-color patterns for the Dutch participants

description: These data represent patterns of colors chosen by participants as congruent or incongruent with an odor. Each row is the color-pattern for one of the 14 odors presented. The columns represent one of the 36 colors that was either chosen as incongruent (1-36) or congruent (37-72) The value in each cell is the total number of times this color was selected. Please refer to the manuscript for details on the odors and colors.
DOI: 10.6084/m9.figshare.21453879.v1
title: Dataset describing the attitudes of medical students in Khartoum, Sudan towards the doctor-patient relationship.

description: Dataset showing the score of items, in addition to a numeric description of the demographics of participants.
DOI: 10.6084/m9.figshare.27959988.v1
title: Supplementary Material for: Successful Management of Post-Thymectomy Pure Red Cell Aplasia with Rituximab: A Case Report

description: Abstract 
Background: Pure red cell aplasia (PRCA) is a rare cause of anemia characterized by decreased red blood cell production, often associated with thymomas. While thymectomy is commonly performed to treat thymoma-associated PRCA, the development of PRCA post-thymectomy is less understood. 
Case presentation: We present a case of a 25-year-old woman who developed PRCA and autoimmune diabetes mellitus (DM) following radical thymectomy for malignant thymoma. Initial treatment with prednisolone showed minimal improvement, leading to the inclusion of rituximab. This combination resulted in a significant increase in reticulocyte counts and transfusion independence. 
Discussion: This case highlights the potential for PRCA to develop after thymectomy and the challenges of treating PRCA in the context of additional conditions like autoimmune DM. While immunosuppressive therapies such as cyclosporin A and corticosteroids are standard, their side effects necessitated exploring alternative treatments. Rituximab proved effective and was well-tolerated, suggesting its potential as a primary option in similar cases.
Conclusion: This case illustrates the occurrence of PRCA after thymectomy and highlights rituximab's effectiveness as a treatment option, offering a viable alternative to standard therapies in managing this complex condition.
DOI: 10.5522/04/24077763.v1
title: Simcol3D - 3D Reconstruction during Colonoscopy Challenge Dataset

description: Colorectal cancer is one of the most common cancers in the world. By establishing a benchmark, SimCol3D aimed to facilitate data-driven navigation during colonoscopy. More details about the challenge and corresponding data can be found in the challenge paper on arXiv. <br> The challenge consisted of simulated colonoscopy data and images from real patients. This data release encompasses the synthetic portion of the challenge. The synthetic data includes three different anatomies derived from real human CT scans. Each anatomy provides several randomly generated trajectories with RGB renderings, camera intrinsics, ground truth depths, and ground truth poses. In total, this dataset includes more than 37,000 labelled images. <br> The real colonoscopy data used in the SimCol3D challenge consists of images extracted from the EndoMapper dataset. The real data is available on the EndoMapper Synapse page. <br> The synthetic colonoscopy data is made available in this repository.
DOI: 10.6084/m9.figshare.1124561.v1
title: Agomelatine unpublished studies: ClinicalTrials.gov

description: Unpublished studies - ClinicalTrials.gov
DOI: 10.6084/m9.figshare.23550129.v2
title: Fig 4 Raw data

description: In vivo and In vitro functional characterization of Ab 009
DOI: 10.6084/m9.figshare.14718348.v1
title: DataSheet_2_Microbial biomass and traits.xlsx

description: This dataset contains microbial biomass (bacteria, fungi, ciliates,testate amoebae, rotifers and nematodes) and microbial traits (growth-yield, resource acquisition and stress traits) extracted from Sphagnum mosses collected in five peatlands along a latitudinal gradient from northern Sweden to southern France to represent a wide range of edaphic and climate conditions in July 2018.
DOI: 10.6084/m9.figshare.27317220.v1
title: Data paper.xlsx

description: This work focused on demonstrating in vitro the antitumor potential of biological derivatives of two promising plants in gastric cancer.
DOI: 10.6084/m9.figshare.23935383.v1
title: 816 multi-target compounds for AR and PTP1B

description: Dataset of 816 multi-target composites designed for AR and PTP1B in csv format. The database includes MOE-calculated Score values for AR and PTP1b and ADME-Tox properties
DOI: 10.6084/m9.figshare.28646009.v1
title: Geo data

description: Geographic data used for Evans and Wilkens,<i> Gender and Literary Geography</i>, Cambridge UP, 2025.
DOI: 10.6084/m9.figshare.20141141.v1
title: Failure dynamics of granular soil with different initial relative densities：Insights from flume experiments

description: Data from real experiments.The original data used in this paper is uploaded in five parts, and the file name corresponds to figure in the paper.
DOI: 10.6084/m9.figshare.21768338.v1
title: Dataset - Case Study Ostredky

description: Dataset used for the research and verification of the Solar-surface-area-to-volume Ratio by applying the indicator in a Case Study Ostredky, Bratislava.
DOI: 10.6084/m9.figshare.25911163.v2
title: Supplementary Material for: Donor inhalation of nebulized dexmedetomidine alleviates ischemia reperfusion damage in rat lung transplantation

description: Introduction: The occurrence of lung ischemia-reperfusion injury (LIRI) after lung transplantation results in primary graft dysfunction (PGD) in more than 50% of cases, which seriously affects the prognosis of recipients. Currently, donor lung protection is the focus of research on improving graft survival in lung transplant recipients. Dexmedetomidine (Dex) is a widely used general anesthesia adjuvant in clinical practice to alleviate ischemia-reperfusion injury in the lungs, liver, heart, kidneys, and brain. However, intravenous infusion of Dex can cause negative effects on the cardiovascular system. Inhaling nebulized Dex can directly act on the alveolar tissue and alleviate its cardiovascular inhibitory effect by reducing drug intake. This study aimed to investigate the effect of donor nebulized Dex inhalation on LIRI after lung transplantation in rats. 
Methods:We randomly allocated male Sprague–Dawley rats into donor groups inhaling nebulized Dex or saline 15 min preoperatively. The donor lung was refrigerated for 8 h before each single lung transplant. After 2 h of reperfusion of the transplanted lung, serum and transplanted lung tissue were collected. The wet-to-dry weight ratio of the lung tissue was measured, arterial blood gas was detected, and histopathology changes, oxidative stress, inflammatory reactions, and apoptosis were evaluated. 
Results: Pre-transplant inhalation of Dex through the donor’s lung reduced the injury of the transplanted lung, increased the levels of malondialdehyde and myeloperoxidase, and decreased the levels of superoxide dismutase and glutathione in the lung tissue. Moreover, nebulized Dex inhalation of the donor lung inhibited LIRI-induced tumor necrosis factor-α, interleukin-6, and inducible nitric oxide synthase expression, and also suppressed nuclear factor-kappa B phosphorylation. Nebulized Dex inhalation reduced the rate of cell apoptosis in the transplanted lung tissue by inhibiting the upregulation of Bax, downregulation of Bcl-2, and increase in caspase-3 lysis caused by LIRI. 
Conclusion: Inhalation of atomized Dex is a potential donor lung protection strategy, which can be used to reduce LIRI after lung transplantation and may be helpful to improve the occurrence of PGD and prognosis of lung transplant recipients.
DOI: 10.6084/m9.figshare.6217415.v1
title: Climatic variation across a latitudinal gradient affect phenology and group size, but not social complexity in small carpenter bees

description: Greater social complexity at lower latitudes have been observed in a variety of arthropods from termites to spiders. Social behavior in the small carpenter bees, <i>Ceratina,</i> has been shown to vary widely both between species and across geographic range. Our goal was to determine how social plasticity of three populations of <i>Ceratina </i>species, <i>C. calcarata</i> and <i>C. strenua</i>, vary across a latitudinal gradient. The data files contain 1) Climate data for the three collection sites: New Hampshire, Missouri and Georgia. 2) The nest collection and adult measurements for the three sites 3) The brood measurements and development rates from the three sites.
DOI: 10.5517/ccdc.csd.cc2m5z2w
title: CCDC 2418808: Experimental Crystal Structure Determination

description: Related Article: Chunling Liu, Yijie Ma, Shenshen Du, Xingjun Ou, Junhao Sun, Xiang Lian, Lixing Song, Fanhong Wu|2025|Cryst.Growth Des.|25|2683|doi:10.1021/acs.cgd.5c00161
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.26839999.v12
title: Supplementary Material for: Statistical Analysis Plan for the AIRCARD Study: Individual Long-Term Air and Noise Pollution Exposure and Cardiovascular Disease Incidence and Mortality – A Prospective Cohort Study Utilizing DANCAVAS and VIVA Screening Trials

description: <b><i>Introduction:</i></b> The AIRCARD study is designed to investigate the relationship between long-term exposure to air and noise pollution and cardiovascular disease incidence and mortality. We aim to conduct a robust prospective cohort analysis assessing the cumulative and differential impacts of air and noise pollution exposure on cardiovascular disease and mortality. This study will adjust for relevant confounders, including traditional cardiovascular risk factors, socioeconomic indicators, and lipid-lowering agents. <b><i>Methods:</i></b> This prospective cohort study will include 27,022 male participants aged 65–74, recruited from the two large Danish DANCAVAS and VIVA trials, both population-based randomized, multicentered, clinically controlled studies. We will assess long-term exposure to air pollutants using the state-of-the-art DEHM/UBM/AirGIS modeling system and noise pollution through the Nord2000 and SoundPLAN models, covering data from 1979 to 2019. This statistical analysis plan is strictly formulated to predefine the analytical approach for all outcomes and key study variables before data access. The primary analysis will utilize Cox proportional hazards models, adjusted for confounders identified in our cohort (age, body mass index, hypertension, diabetes, smoking status, family history of heart disease, socioeconomic factors, and lipid-lowering agents). This statistical analysis plan further includes Spearman rank correlation to explore inter-pollutant associations. <b><i>Conclusion:</i></b> The AIRCARD study addresses global concerns about the impact of air and noise pollution on cardiovascular disease. This research is important for understanding how the pollutants contribute to cardiovascular disease. We aim to provide insights into this area, emphasizing the need for public health measures to mitigate pollution exposure. Our goal is to provide policymakers and healthcare professionals with information on the role of environmental factors in cardiovascular health that could influence global strategies to reduce the cardiovascular disease burden associated with pollution. The design of this SAP ensures transparency and verifiability, considering the complexities of evaluating environmental health impacts over an extended period.
DOI: 10.6084/m9.figshare.8262662.v1
title: Supplementary Material for: Effects of Weighted Hula-Hooping Compared to Walking on Abdominal Fat, Trunk Muscularity, and Metabolic Parameters in Overweight Subjects: A Randomized Controlled Study

description: <b><i>Background:</i></b> Weighted hula-hoops have gained popularity, but whether they indeed reshape the trunk or have beneficial metabolic effects in overweight subjects is unknown. <b><i>Objectives:</i></b> To determine effects of hula-hooping and walking matched for energy expenditure on android fat %, trunk muscle mass, and metabolic parameters in a randomized cross-over study. <b><i>Design:</i></b> We recruited 55 overweight nondiabetic subjects, who were randomized to hula-hooping (HULA) for 6 weeks using a 1.5-kg weighted hula-hoop followed by walking (WALK) for another 6 weeks or vice versa. The increments in energy expenditure were similar by HULA and WALK. Body composition (dual-energy X-ray absorptiometry) and metabolic parameters were measured at baseline and after HULA and WALK. The primary endpoint was the change in fat % in the android region. <b><i>Results:</i></b> A total of 53<i></i>subjects (waist 92 ± 1 cm, body mass index 28 ± 1 kg/m<sup>2</sup>) completed the study. Body weight changed similarly (–0.6 ± 0.2 vs. –0.5 ± 0.2 kg, nonsignificant; HULA vs. WALK). During the intervention the subjects hula-hooped on average 12.8 ± 0.5 min/day and walked 9,986 ± 376 steps/day. The % fat in the android region decreased significantly by HULA but not by WALK (between-group change <i>p</i> &lt; 0.001). Trunk muscle mass increased more by HULA than by WALK (<i>p</i> &lt; 0.05). Waist circumference decreased more by HULA than by WALK (–3.1 ± 0.3 cm vs. –0.7 ± 0.4 cm, <i>p</i> &lt; 0.001; HULA vs. WALK). WALK but not HULA significantly lowered systolic blood pressure and increased HDL cholesterol while HULA significantly decreased LDL cholesterol. <b><i>Conclusions:</i></b> Hula-hooping with a weighted hula-hoop can be used to decrease abdominal fat % and increase trunk muscle mass in overweight subjects. Its LDL lowering effect resembles that described for resistance training.
DOI: 10.6084/m9.figshare.22723396.v1
title: Instruction.docx

description:   Instruction
DOI: 10.6084/m9.figshare.28315208.v1
title: Supplementary Material - Bienveignant et al., 2025

description: This Supplementary Material contains all the LA-ICP-MS data obtained in this study, including both datable and non-datable samples. Additionally, it also includes all the EPMA data acquired on chlorites, which were used for the thermometric analyses described in the article.
DOI: 10.6084/m9.figshare.7930340.v1
title: gVCF_NA19701

description: 1000 Genomes gVCF mapped to hs37d5 for NA19701. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.6084/m9.figshare.1566851.v1
title: A genome-scale investigation of incongruence in Culicidae mosquitoes

description: All data and analyses described in the paper "A genome-scale investigation of incongruence in Culicidae mosquitoes" are deposited here.
DOI: 10.6084/m9.figshare.28451024.v1
title: Supplementary Material for: First description of upadacitinib as treatment for collagenous colitis with a concomitant lymphocytic disorder of the upper gastrointestinal tract

description: Introduction: The medical treatment of refractory collagenous colitis with a concomitant symptomatic lymphocytic disorder of the upper gastrointestinal tract is very challenging with scarce evidence. 
Case presentation: We present a 61-year-old female patient with a long-standing highly refractory collagenous colitis with a concomitant symptomatic lymphocytic disorder with villous atrophy and intraepithelial lymphocytes of the upper gastrointestinal tract causing severe watery diarrhoea with severe hypokalemia and recurrent episodes of prerenal kidney injuries requiring several hospital admissions. Celiac serology as well as genetic analyses (HLA-DQ2/DQ8) were negative, and other common etiologies of intraepithelial lymphocytes and villous atrophy were ruled out. Considering the similar course of the disease in the upper and lower gastrointestinal tract for a time period of more than 20 years, a common etiologic relationship, particularly an autoimmune disorder seems to be very likely in this patient. 
Several therapies such as budesonide, immunomodulators, and the biologics infliximab and vedolizumab had to be stopped due to either non-response, loss-of-response or drug-related side effects. However, the patient responded immediately to the JAK-1 inhibitor upadacitinib, with documented remission for more than one year.
Conclusion: For the first time, a prompt and significant response to upadacitinib in a patient with refractory collagenous colitis with upper gastrointestinal tract involvement was shown, suggesting upadacitinib as therapy of choice in severe therapy-refractory cases of collagenous colitis, particularly with concomitant upper gastrointestinal tract involvement.
DOI: 10.6084/m9.figshare.24980775.v1
title: Supplementary Material for: Ehrlichia chaffeensis co-opts phagocytic hemocytes for systemic dissemination in the Lone Star tick, Amblyomma americanum.

description: Hematophagous arthropods can acquire and transmit several pathogens of medical importance. In ticks, the innate immune system is crucial in the outcome between vector-pathogen interaction and overall vector competence. However, the specific immune response(s) elicited by the immune cells known as hemocytes remains largely undefined in Ehrlichia chaffeensis and its competent tick vector, Amblyomma americanum. Here, we show that granulocytes, professional phagocytic cells, are integral in eliciting immune responses against commensal and pathogen infection. The chemical depletion of granulocytes led to decreased phagocytic efficiency of tissues-associated hemocytes. We demonstrate E. chaffeensis can infect circulating hemocytes, and both cell-free plasma and hemocytes from E. chaffeensis-infected ticks can establish Ehrlichia infection in recipient ticks. Lastly, we provide evidence to show granulocytes play a dual role in E. chaffeensis infection. Depleting granulocytic hemocytes increased Ehrlichia load in the salivary gland and midgut tissues. In contrast, granulocyte depletion led to a reduced systemic load of Ehrlichia. This study has identified multiple roles for granulocytic hemocytes in the control and systemic dissemination of E. chaffeensis infection.
DOI: 10.6084/m9.figshare.25966048.v1
title: Livelihood strategies, food security status, and household resilience to food insecurity

description: This project contains the following underlying data: Fourteen data files, seven in excel and seven in STATA DTA formats, on each of the seven resilience components and the overall resilience index. The data files AC, ABS, IFA, S, SC, ATA and AP refer to data of adaptive capacity, access to basic services, income and food access, sensitivity, social capital, agricultural technology adoption and asset possession components respectively. Additionally, a word data file containing transcripts from FGDs and KIIs, and a PDF data file of informed consent from Institutional Review Board (IRB) of Addis Ababa University College of Development Studies have been stored.<br>
DOI: 10.6084/m9.figshare.25853995.v1
title: <b>Amino acid sequences of </b><b><i>Arhopalus unicolor</i></b><b> </b><b>protein-coding genes</b>

description: Fasta file of amino acid sequences of <i>Arhopalus unicolor</i> protein-coding genes.
DOI: 10.6084/m9.figshare.11936610.v1
title: Dual voltage-calcium optical mapping in cardiac slice of Sham C57 murine

description: Raw data of dual voltage-calcium optical mapping in cardiac slice of Sham C57 murine. The heart was transectioned into 300-µm thick slices from apex to base. 15 slices were collected from slice1 (apex) to slice 15 (base). We recorded Vm and CaT signals at 2-, 4-, 8- ,and 16- Hz pacing; the interval was 3.0 ms and the voltage was 15 V.
DOI: 10.6084/m9.figshare.22591153.v1
title: Calculation Data

description: This is an overall calculation for the study entitled " <strong>TRANSFORMATION OF SUSTAINABILITY CONCEPT IN THE SOCIOECONOMIC SYSTEM AND LABOR MARKET".</strong>
DOI: 10.6084/m9.figshare.21947432.v1
title: Let’s just ask them. Perspectives on urban dwelling and air quality: a cross-sectional survey of 3,222 children, young people and parents

description: A code book and corresponding dataset produced by the London School of Hygiene and Tropical Medicine. Data features survey responses from 3,222 young people, parents of children, and expectant parents from around the world. This survey was administered to help understand the perspectives of young people in cities effected by air pollution. This research took place during the first phase of research completed by the Children, Cities and Climate Action Lab in 2021. Supplementary material includes methods and some summarized survey statistics.
DOI: 10.6084/m9.figshare.7322165.v1
title: Micro computed tomography of P. spumarius and G. atropunctata

description: This record reports µCT Images mentioned in the paper "Fluid dynamics in the foregut of xylem-sap feeding insects: a comparative study of two <i>Xylella fastidiosa </i>vectors", limited to the head of the two insects. In the section materials and method of the paper are available the description of the sample acquisition and preparation and of the images acquisition . In particular, a SkyScan1272 was used at the MicroPhotonics facility (Micro Photonics Inc. Allentown, PA). The beam energy was set to 50KV in a current source of 200µA. The image pixel size resolution was 1.999974µm and pictures were captured over a global 360°rotation sampled at steps of 0.1°. The record is composed of archive files: <i>1) </i><i>BGSS_HEAD.zip</i> contains 965 µCT Images of the blue green sharpshooter (<i>G. atropunctata</i>), numbered from the basis of the head (<i>bgss_2um__rec_tra_voi__voi_00002060.bmp</i>) up to the top of the head (<i>bgss_2um__rec_tra_voi__voi_00003024.bmp</i>) <i>2) </i><i>PS_HEAD.zip</i> contains 1068 µCT Images of the meadow spittlebug (<i>P. spumarius</i>), numbered from the basis of the head (<i>ps_2um__rec_voi__voi__Tra_Tra00002133.jpg</i>) up to the top of the head (<i>ps_2um__rec_voi__voi__Tra_Tra00003201.jpg</i>).
DOI: 10.6084/m9.figshare.14983851.v1
title: Table S1 - Metadata

description: Metadata associated with wells used in analyses.
DOI: 10.6084/m9.figshare.28328342.v1
title: Summary of library sequencing data

description: Summary of library sequencing data