cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11620092.v1
title: Differentially Expressed Genes (DEGs) in floral bud transcriptomes

description: The relative abundance for each transcript and unigene was quantified in the floral bud samples (S1, flowering induction; S2-S4, flower whorls development and D, dormancy) by aligning the reads to the transcriptome assembly using RSEM v1.3.0 software. To identify the differentially expressed genes the Deseq2 1.12.4 software was used. <br>The Summary of DEGs.xlsx archive contains: the "Tables sheet" with tables about the number of DEGs (up- and down-regulated) in sucessive pairwise comparisons of floral buds, GO summary and the number and percentaje of DEGs codifying transcription factors; the "Gene Annotation sheet" with the annotation of DEGs; the Gene Ontology sheet" with the GO terms found for each transcript; the "KEGG sheet" with the KEGG terms found for each transcript; the "Transcription Factor Families" sheet with the description of DEGs codifying transcription factors.The DEGs.fasta archive contains the deduced nucleotide sequences of DEG transcripts.The diff.Expr.matrix... archive contains a heatmap showing the log2 of fold-change of DEGs vs the samples analized (S1-S4 and D floral buds). Yellow and magenta colors represent up- and down-regulated genes, respectively. Scale, representing the signal values, is shown at the top of the figure.<br>The "MADS-box transcripts found during floral bud development in P. avium cv. Bing”.xlsx archive includes the Trinity identification (Trinity #id), MADS-box gene identification (Gene ID, this work), Gene Subfamily, Genbank accession number considering only <i>P. avium</i>, mean value of Transcripts Per Million (TPM) in S1-S4 and Dormancy (D) buds, Translation (Complete/Partial) using TransDecoder, Diferential expression (DEG Yes/No) and if the MADS-box genes was analyzed by qPCR.
DOI: 10.6084/m9.figshare.22679050.v1
title: Data file of RNA-Seq recipe Book 2 Chapter7-2

description: Data file of RNA-Seq recipe Book 2 Chapter7-2
DOI: 10.22023/mdx.20411331.v1
title: Exploration of Social Sharing Presentation Q.pdf

description: The Museum of Domestic Design and Architecture ran a student project in spring 2022, funded by the Art Fund. Eight students were employed to improve the museum's instagram presence using an experimental model based on Culture 24's Let's Get Real.
DOI: 10.3535/nds-6jw-fad
title: Lagenochitina megaesthonica

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p26-s52-eqb
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1k6-dhb-ya9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/b50-5q7-vty
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.15117612
title: Raw Data_Factors Influencing English Performance Among Chinese University Students

description: The dataset titled " Raw Data_Factors Influencing English Performance Among Chinese University Students" was collected from students at five universities across China. The survey was conducted between September and December 2024 using the online platform Questionnaire Star (www.Sojump.com). After excluding invalid responses, 508 valid questionnaires were analyzed. This study focuses on key factors influencing college students' English performance, including English learning motivation, self-efficacy, and learning strategies, in order to explore their impact on English achievement. This dataset provides valuable insights into the factors affecting English achievement among Chinese university students.
DOI: 10.5281/zenodo.15117613
title: Raw Data_Factors Influencing English Performance Among Chinese University Students

description: The dataset titled " Raw Data_Factors Influencing English Performance Among Chinese University Students" was collected from students at five universities across China. The survey was conducted between September and December 2024 using the online platform Questionnaire Star (www.Sojump.com). After excluding invalid responses, 508 valid questionnaires were analyzed. This study focuses on key factors influencing college students' English performance, including English learning motivation, self-efficacy, and learning strategies, in order to explore their impact on English achievement. This dataset provides valuable insights into the factors affecting English achievement among Chinese university students.
DOI: 10.3535/dkw-663-qz9
title: Rhynchonellida Kuhn, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yya-c12-l9z
title: Rhynchonellida Kuhn, 1949

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6s1-1sz-gex
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kf2-3xt-pya
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3698401_d1.v1
title: Additional file 1 of Object-NoSQL Database Mappers: a benchmark study on the performance overhead

description: CPU Metric. (TXT 2 kb)
DOI: 10.3535/1wt-g1b-1y7
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6nt-hrx-9tt
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/483dpdvh8w
title: Appendix. "Gender occupational intensity and wages in the Northern Triangle of Central America"

description: Supplementary documents and Tables from the study "Gender occupational intensity and wages in the Northern Triangle of Central America"
DOI: 10.17632/x298swph6p
title: Data for: COVID-19 Dataset: Worldwide Spread Log Including Countries First Case And First Death

description: Contain informative data related to COVID-19 pandemic. Specially, figure out about the First Case and First Death information for every single country. The datasets mainly focus on two major fields first one is First Case which consists of information of Date of First Case(s), Number of confirm Case(s) at First Day, Age of the patient(s) of First Case, Last Visited Country and the other one First Death information consist of Date of First Death and Age of the Patient who died first for every Country mentioning corresponding Continent. The datasets also contain the Binary Matrix of spread chain among different country and region.
DOI: 10.3535/7dl-f1t-1dr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/949-d2p-mdb
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24203562.v1
title: circRNA-Counts.xlsx

description: mRNA, miRNA, lncRNA, circRNA -sequencing raw data
DOI: 10.6084/m9.figshare.833888.v1
title: SG hybrid trace of CG class C with 32 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.17632/vrttvv8tgd
title: Data for: Sulfide mantle source heterogeneity recorded in basaltic lavas from the Azores
DOI: 10.3535/df2-kgv-lcr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pc2-x6g-y3n
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24038433.v1
title: Putin's war axiology

description: A detailed list of values attributed to Russian and to the West, accompanied by corresponding excerpts from Putin's speeches on Russian-Ukrainian war (23 February - 30 September 2022)
DOI: 10.3535/58h-4gw-43c
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5zd-a3g-x87
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28590170.v1
title: Short fin mako gene models

description: Gene models inferred with Braker3 on the genome assembly NCBI GCA_026770705.1 reported by Stanhope et al. (2023) available at https://doi.org/10.1016/j.isci.2022.105815
DOI: 10.17632/w7kz8n3s3y
title: Corona and SARS Impact on Social Sciences Publications Data

description: Contains the list of publications and all details on the subject of SARS and Corona Impact on Social Sciences
DOI: 10.3535/9fl-5lw-nxh
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12815204.v3
title: Dataset for the paper "Intensifying neighbouring tree competition suppresses tree growth at the eastern Tibetan treeline" in <i>Functional Ecology</i>

description: This dataset include the main data and the R code for the paper "Intensifying neighbouring tree competition suppresses tree growth at the eastern Tibetan treeline".
DOI: 10.6084/m9.figshare.13614548.v1
title: Risk factors for major external structural birth defects among children in Kiambu County, Kenya: a case-control study

description: Replication data for MESBDs
DOI: 10.6084/m9.figshare.22583677.v1
title: ssub_formula_energy dataset

description: Source: https://github.com/wolverton-research-group/qmpy/blob/master/qmpy/data/thermodata/ssub.dat <br> <br> import pandas as pd df=pd.read_csv('ssub.dat',sep=' ',header=None) df.columns=['formula','formula_energy'] <br> df=df.sort_values('formula_energy', ascending=True).drop_duplicates('formula').sort_index() df=df.sample(frac=1) df['id']=df.index <br> from jarvis.db.jsonutils import dumpjson #for jarvis-tools mem=[] for i,ii in df.iterrows(): info={} info['id']=ii['id'] info['formula_energy']=ii['formula_energy'] info['formula']=ii['formula'] mem.append(info) dumpjson(filename='ssub.json',data=mem) <br> !zip ssub.json.zip ssub.json
DOI: 10.6084/m9.figshare.8284016.v1
title: Global distributions for common UK rocky shore species

description: Global distributions of common intertidal species found in the UK as ESRI polygon shapefiles (all WGS 84). Each species is represented by a polygon or polygons that bounds the locations reported in the literature for the occurrence of the species. A full list of the sources of data used to produce these files is given in the pdf included (taken from a manuscript in review). The shapefiles were produced to determine thermal affinities and thermal range widths from the range of temperatures found within the geographical range of each species. Filenames indicate species identity, using known outdated synonyms in some cases.
DOI: 10.3535/5t5-6jj-hax
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pzh-fba-dzn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14416547.v1
title: OnlineRepository_RawData_CLEMSIMS.zip

description: Electron microscopy (EM) has been employed for decades to analyze cell structure. To also analyze the positions and functions of specific proteins, one typically relies on immuno-EM or on a correlation with fluorescence microscopy, in the form of correlated light and electron microscopy (CLEM). Nevertheless, neither of these procedures is able to also address the isotopic composition of cells. To solve this, a correlation with secondary ion mass spectrometry (SIMS) would be necessary. SIMS has been correlated in the past to EM or to fluorescence microscopy in biological samples, but not to CLEM. We achieved this here, using a protocol based on transmission EM, conventional epifluorescence microscopy and nanoSIMS. The protocol is easily applied, and enables the use of all three technologies at high performance parameters. We suggest that CLEM-SIMS will provide substantial information that is currently beyond the scope of conventional correlative approaches.
DOI: 10.17632/9mbb8sp7b7
title: The ubiquitin ligase RFWD3 is required for translesion DNA synthesis

description: Unprocessed and uncompressed data
DOI: 10.3535/3sk-zwf-3m4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y1l-kyt-1cn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.6400019.v1
title: Spatial Uncertainty in Digital Image Correlation

description: This is the original materials of my paper "spatial uncertainty of measurement errors in digital image correlation."<br>The spatial uncertainty is caused by the differences of intensity distribution between different subsets. In the paper, I try to build a theoretical model to estimate the spatial uncertainty of measurement errors in DIC for speckle patterns that are composed of randomly positioned speckles. The essenstial difference between this paper and my previous work "statistical model for speckle pattern optimization" is that this work can estimate the spatial uncertainty while the previous work can't.<br>The data set, which is the same as our previous paper, can be found in Figshare. The "SpatialUncertainty" contains the MATLAB codes.<br>The mathematical derivations are somewhat complex, so I upload my note. In the note, the derivation details can be found. A problem may be that this note is written in Chinese...<br>If you have any question or find something is wrong, you can send me an email. My email address is suyong@ustc.edu.cn.
DOI: 10.3535/4a8-37m-a4f
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yd3-jx6-53e
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yv7-8hd-r71
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/dpw79g6nj3
title: Earth system impacts of European colonization of the Americas

description: The potential impacts of human actions on the Earth system prior to the Industrial Revolution are not well constrained. We investigate whether the decline in global atmospheric CO2 concentration by ca. 7–10 ppm in the late 1500s and early 1600s and globally lowered surface air temperatures of 0.1–0.2°C were generated by natural forcing or were a result of the large-scale depopulation of the Americas after European arrival, subsequent abandonment of agriculture and regrowth of natural vegetation. We quantitatively review the evidence for (i) the pre-Columbian population size, (ii) their per capita land use, (iii) the depopulation rates, (iv) the resulting carbon uptake of the abandoned anthropogenic landscapes, and (v) assess the scale of this carbon uptake compared to other carbon cycle and radiative forcing changes occurring at that time. From 119 published regional population estimates we find a pre-1492 population of 60.5 million (interquartile range, IQR 44.8–78.2 million), utilizing 1.04 ha land per capita (IQR 0.98–1.11, n = 18). European epidemics removed 90% (IQR 87–92%) of the indigenous population over the next century. This resulted in the return of 55.8 Mha (IQR 39.0–78.4 Mha) farmland to its prior state, sequestering 7.4 Pg C (IQR 4.9–10.8 Pg C), equivalent to a decline in atmospheric CO2 of 3.5 ppm (IQR 2.3–5.1 ppm CO2). Subsequent temperature-carbon cycle feedback processes further increased land carbon uptake thereby driving a small and relatively short-lived global impact on the Earth System in the centuries prior to the Industrial Revolution.
DOI: 10.3535/b99-yar-fhl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l53-fd5-22p
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6we-eez-mm8
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/g6v-lyk-gcy
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yt3-5k3-y3x
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20222055.v1
title: Polyp-canal reconstruction reveals evolution towards complexity in corals (Dataset Part 117)

description: There are 17 files in this dataset. This is the 117th part of this dataset. The <em>A. millepora</em>, <em>A. muricata</em>,<em> C. vaughani</em>,<em> M. capricornis</em>, <em>M. foliosa</em>,<em> P. damicornis</em>, <em>P. meandrina</em>,<em> P. verrucosa</em>, and<em> S. pistillata</em> samples were collected from the Xisha Islands (2018); the <em>A. digitifera</em>, <em>F. speciosa </em>(2008), and<em> M. turgescens</em> (2017) samples were collected from the Nansha Islands; the <em>P. lutea</em> samples were collected from the Weizhou Islands (2017); the <em>G. fascicularis</em>, and<em> M. stellata </em>samples were collected from the Gaven Reef (2017); the <em>A. myriophthalma</em> samples were collected from the Reed Tablemount (2017); the <em>P. sinensis</em> samples were collected from the Subi Reef (2017). All samples, which occurred in large arborescent colonies forming thickets, were found in tropical shallow reefs of the marine neritic zone, from depths of about 5 to 10 m. The daily mean temperature was between 23.2 and 29.2°C. The coral samples were kept whole and housed in our laboratory coral tank, where all conditions were simulated to reflect those of their habitat in the South China Sea. These samples were kept in the tank for about one to three months before HRCT analysis.
DOI: 10.6084/m9.figshare.21774704.v1
title: Evaluating effects of remote sensed neighborhood crowding indices and depth-to-water on tree height growth

description: Data set containing 4 386 trees of three different species (Picea glauca, Pinus contorta and Populus tremuloides). Based on UAV derived canopy height models and canopy surface models a set of four different neighborhood crowding indices and a depth-to-water index were calculated for each tree. Abbreviations: WS: White spruce; LP: Lodgepole pine; TA: Trembling aspen; hg_19: tree height in 2019; hg_21: tree height in 2021; mch: Mean canopy height; cc: canopy cover; ca; canopy above; canopy_angle: Canopy angle.
DOI: 10.17632/4ds8n86wv3
title: Seismic Fault Mechanisms and Numerical Simulation Layers for Tsunami Simulations along West Coasts of Sumatra, Indonesia

description: These datasets consist of two parts. The first part is for seismic fault mechanisms along Sumatra-Andaman Subduction Zone (Table 1). There are five segments along the subduction zone, i.e. Aceh-Andaman, Nias-Simeulue, Siberut-Mentawai, Enggano, and Sunda Strait. The dimension of the faults were based on total energy released by the magnitudes and later were transformed into rupture area. The rupture area were calculated based on Scaling Laws of Wells and Coppersmith (1984). 

The second part is for the tsunami numerical simulation layers (see Table 2). These best fit to tsunami numerical simulations using Cornell Multigrid Coupled Tsunami Model (COMCOT). The layers cover all areas along the west coasts of Sumatra. There are five levels of the layers, namely Layer 1 until Layer 5. Layer 1 has the coarsest grids and Layer 5 has the finest grid size.
DOI: 10.17632/h8b59vvc2m
title: EDP Informational-Frames Study

description: The study was designed to examine whether informational frames preceding police officer-civilian confrontation videos can influence how participants perceive the video and ultimately make decisions about the officer’s use of force. Two types of informational frames were examined in the present study: civilian EDP- and police warning-informational frames. Experiment 1 examined whether civilian EDP-informational frames affected judgments of police use of force. Information about the civilian in the video was varied: participants were either informed the civilian had a substance abuse issue, mental illness, or nothing (no EDP control). Experiment 2 examined whether civilian EDP- and police warning-informational frames influenced judgments of police use of force. Participants were either told the officer was informed about the civilian’s behavior, the officer was not informed about the civilian’s behavior, or nothing.
DOI: 10.3535/0b4-c3z-smj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/te6-mx1-mxg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22581736.v1
title: Data source

description: 625,219 records are the original data sources for the population and 42 types of products, buildings, and infrastructure items in the 337 cities from 1978 to 2020
DOI: 10.6084/m9.figshare.8853764.v1
title: JulieKim06 Differential Expression.xlsx

description: RNA-seq data comparing treatment of normal follicular phase estradiol and testosterone to PCOS levels of estradiol and testosterone for 14 days on endometrial organoids in vitro.
DOI: 10.17632/6nns35xpjw
title: The mediating effect of sense of coherence in the relationship between eating attitudes and self-esteem in adolescents

description: Abstract
Purpose: This study aimed to examine the mediating effect of a sense of coherence in the relationship between eating attitudes and self-esteem in adolescents.
Methods: The study was conducted in a descriptive-correlational exploratory design. The sample of the study consisted of 1175 adolescents who met the inclusion criteria. Data were obtained by the researchers using personal information form, the Sense of Coherence Scale (SOC-13), the Eatıng Attitude Test (EAT-26), and the Rosenberg Self-Esteem Scale (RSES).
Results: SOC-13 mean score was 50.21 ± 11.06, EAT-26 mean score was 14.53 ± 10.17, and RSES mean score was 4.17 ± 1.66. It was found that there was a statistically significant negative relationship between the mean scores of RSES and the EAT, a positive relationship between the mean scores of the RSES and SOC, and a negative relationship between the mean scores of EAT and SOC. Moreover, the mediating role of SOC was found to be moderate. Furthermore, 4.5% of adolescents' sense of coherence scores are explained by eating attitude. On the other hand, 16.4% of self-esteem scores are explained by eating attitude and sense of coherence.
Conclusion: As a result of this study, it was determined that students' sense of coherence moderately mediated the relationship between eating attitude and self-esteem. At the same time, eating attitude had a direct predictive effect on self-esteem.
DOI: 10.3535/h2q-8tc-shj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sxe-klg-3kf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/byn-8dj-fkw
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.