cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4769118
title: Cooking small and large portions of 'biodiversity-soup': Miniaturised DNA metabarcoding PCRs perform as good as large-volume PCRs

description: DNA metabarcoding is a powerful tool to assess arthropod diversity in environmental bulk samples such as Malaise trap, pitfall trap or hand net samples. While comparative performance tests for different extraction protocols, primers and Taq polymerases have been made, the effect of different PCR volumes on bulk sample metabarcoding performance is less explored. Although using small PCR volumes reduces overall costs, they may lead to decreased taxon recovery or higher replicate variability due to increased pipetting imprecision, PCR stochasticity (PCR drift) or inhibition when using high amounts of template community DNA. We here performed a simple DNA metabarcoding experiment to test if species detection and the consistency of technical replicates decreases with decreasing PCR reaction volume in standard reaction tubes. We used a mock community sample consisting of different amounts of DNA from 35 arthropod species, and a Malaise trap sample composed of many thousand insect specimens. PCR volumes tested were 5, 10, 15, 20, 25 and 50 µl. Both samples were replicated 14 times in the first PCR step with two technical replicates each in the second PCR step. Our data show that small PCR volumes did neither have systematically lower species detection or richness values, nor lower consistency of PCR replicates. We therefore recommend low volumes primarily depending on handling constraints. Further, we emphasize the importance of sequencing depths for taxon recovery.
DOI: 10.25919/9mf6-0f70
title: Parkes observations for project P885 semester 2021APRS_04

description: We propose to continue observing the magnetars 1E 1547.0-5408 and PSR J1622-4950 weekly, to track their rotation, flux density, and polarisation. The revolutionary UWL capabilities promise new opportunities to disentangle still mysterious radio emission mechanisms in magnetars. This promise is supported by the recent follow up of XTE J1810-197, again a radio magnetar after 10 years dormant, and of the hot-off-the-press magnetar Swift J1818.0-1607, for which our exciting recent results with UWL motivate an increased monitoring cadence to once weekly.
DOI: 10.34740/kaggle/dsv/2243119
title: Contrastive Language Image Pretraining by openai
DOI: 10.6084/m9.figshare.8971565
title: ‘Providence’ or ‘religious fatalism’? A distinction without a difference in disasters research?

description: One of the principle theological themes that emerged from my narrative data, gathered from interviewing survivors of the 2010 Haiti earthquake, was that of divine providence. Although the terms ‘fatalism’ and ‘providence’ were never explicitly used by the researchers or the participants, the language interviewees used and the meaning they expressed would be categorised in traditional theological terms under divine providence. Yet, when social scientists commentate upon the same beliefs, they tend to use the term ‘religious fatalism’. What could appear to be a distinction without a difference, however, can actually represent a misunderstanding with possible egregious consequences. With reference to a discussion between a social geographer colleague and myself as a practical theologian, I seek to explore the dilemma that can arise over use of different terms when referring to the same incident by social scientists and theologians.
DOI: 10.6084/m9.figshare.8971565.v1
title: ‘Providence’ or ‘religious fatalism’? A distinction without a difference in disasters research?

description: One of the principle theological themes that emerged from my narrative data, gathered from interviewing survivors of the 2010 Haiti earthquake, was that of divine providence. Although the terms ‘fatalism’ and ‘providence’ were never explicitly used by the researchers or the participants, the language interviewees used and the meaning they expressed would be categorised in traditional theological terms under divine providence. Yet, when social scientists commentate upon the same beliefs, they tend to use the term ‘religious fatalism’. What could appear to be a distinction without a difference, however, can actually represent a misunderstanding with possible egregious consequences. With reference to a discussion between a social geographer colleague and myself as a practical theologian, I seek to explore the dilemma that can arise over use of different terms when referring to the same incident by social scientists and theologians.
DOI: 10.5281/zenodo.4767031
title: MoMaF Movie metadata for Finnish Fiction Films, technical metadata dataset 1

description: Dataset contains technical metadata for Finnish Fiction Films up to 2018. The data has been gathered from the Elonet database managed by the Finnish National Audiovisual Institute, from the printed Finnish National Filmography, and through personal communication with the Institute. The dataset has been gathered in the context of the project <em>Movie Making Finland: Finnish fiction films as audiovisual big data, 1907–2017</em> (<em>MoMaF</em>).
DOI: 10.5281/zenodo.4702841
title: Data Sets for Sandanbata et al. (2021, JGR: Solid Earth) entitled "Moment tensors of ring-faulting at active volcanoes: Insights into vertical-CLVD earthquakes at the Sierra Negra caldera, Galápagos Islands"

description: <strong>Descriptions</strong> This datasets are parts of the supplementary materials for the following research article: Sandanbata, O., Kanamori, H., Rivera, L., Zhan, Z., Watada, S., & Satake, K. (2021). Moment Tensors of Ring‐Faulting at Active Volcanoes: Insights into Vertical‐CLVD Earthquakes at the Sierra Negra Caldera, Galápagos Islands. <em>Journal of Geophysical Research: Solid Earth</em>, 126, e2021JB021693. https://doi.org/10.1029/2021JB021693 We conduct moment tensor (MT) inversion for the 2005 earthquake at the Sierra Negra caldera, the Galapagos Islands. For the inversion, we assumed different centroid locations in 3D space, i.e., on the x–y (longitude-latitude) plane at a depth of 2.5 km below the solid surface, and the x–z (longitude–depth) plane along a latitude of 0.83°S across the Sierra Negra caldera. Data Sets S1 and S2 contain MT solutions obtained by the MT inversion with a constraint of zero trace; those solutions are used for Figure 7 in "Main Text". Data Sets S3 and S4 contain MT solutions obtained by the MT inversion with constrains of zero trace and zero <em>DS</em> component (\(M_{r\theta}=M_{r\phi}=0\)); those are are used for Figure S1 in "Supporting Information". For the detailed methodology and data, see Section 3 in "Main Text" and Text S1 in "Supporting Information" of our manuscript.
description: Fixed typos in "README" file (on April 20, 2021).
description: {"references": ["Sandanbata, O.,\u00a0Kanamori, H.,\u00a0Rivera, L.,\u00a0Zhan, Z.,\u00a0Watada, S., &\u00a0Satake, K.\u00a0(2021).\u00a0Moment Tensors of Ring\u2010Faulting at Active Volcanoes: Insights into Vertical\u2010CLVD Earthquakes at the Sierra Negra Caldera, Gal\u00e1pagos Islands.\u00a0Journal of Geophysical Research: Solid Earth,\u00a0126, e2021JB021693.\u00a0https://doi.org/10.1029/2021JB021693"]}
DOI: 10.5281/zenodo.4414990
title: Data Sets for Sandanbata et al. (2021, JGR: Solid Earth) entitled "Moment tensors of ring-faulting at active volcanoes: Insights into vertical-CLVD earthquakes at the Sierra Negra caldera, Galápagos Islands"

description: <strong>Descriptions</strong> This datasets are parts of the supplementary materials for the following research article: Sandanbata, O., Kanamori, H., Rivera, L., Zhan, Z., Watada, S., & Satake, K. (2021). Moment Tensors of Ring‐Faulting at Active Volcanoes: Insights into Vertical‐CLVD Earthquakes at the Sierra Negra Caldera, Galápagos Islands. <em>Journal of Geophysical Research: Solid Earth</em>, 126, e2021JB021693. https://doi.org/10.1029/2021JB021693 We conduct moment tensor (MT) inversion for the 2005 earthquake at the Sierra Negra caldera, the Galapagos Islands. For the inversion, we assumed different centroid locations in 3D space, i.e., on the x–y (longitude-latitude) plane at a depth of 2.5 km below the solid surface, and the x–z (longitude–depth) plane along a latitude of 0.83°S across the Sierra Negra caldera. Data Sets S1 and S2 contain MT solutions obtained by the MT inversion with a constraint of zero trace; those solutions are used for Figure 7 in "Main Text". Data Sets S3 and S4 contain MT solutions obtained by the MT inversion with constrains of zero trace and zero <em>DS</em> component (\(M_{r\theta}=M_{r\phi}=0\)); those are are used for Figure S1 in "Supporting Information". For the detailed methodology and data, see Section 3 in "Main Text" and Text S1 in "Supporting Information" of our manuscript.
description: Fixed typos in "README" file (on April 20, 2021).
description: {"references": ["Sandanbata, O.,\u00a0Kanamori, H.,\u00a0Rivera, L.,\u00a0Zhan, Z.,\u00a0Watada, S., &\u00a0Satake, K.\u00a0(2021).\u00a0Moment Tensors of Ring\u2010Faulting at Active Volcanoes: Insights into Vertical\u2010CLVD Earthquakes at the Sierra Negra Caldera, Gal\u00e1pagos Islands.\u00a0Journal of Geophysical Research: Solid Earth,\u00a0126, e2021JB021693.\u00a0https://doi.org/10.1029/2021JB021693"]}
DOI: 10.14457/ru.the.2010.15
title: การจัดการความโปร่งใสและการมีส่วนร่วมในบริการสาธารณะขององค์กรปกครองส่วนท้องถิ่น
DOI: 10.14457/cmu.the.2010.101
title: ผลการใช้ชุดกิจกรรมการเรียนรู้แบบประสบการณ์ที่มีต่อความคิดสร้างสรรค์ทางทัศนศิลป์ของนักเรียนชั้นมัธยมศึกษาปีที่ 3 โรงเรียนไชยปราการ จังหวัดเชียงใหม่ /
DOI: 10.14457/cmu.the.2010.108
title: ผลของการใช้สื่อประสมในการสอนภาษาตามแนวธรรมชาติที่มีต่อความสามารถทางการเขียนของนักเรียนชั้นอนุบาล 2 โรงเรียนอรุโณทัย /
DOI: 10.6084/m9.figshare.6994460
title: Systematic review of melatonin levels in individuals with complete cervical spinal cord injury

description: <b>Context:</b> Pineal melatonin production is mediated by afferent signaling pathways that navigate through the cervicothoracic spinal cord. Melatonin profiles in individuals with complete cervical spinal cord injury (SCI) have not been systematically reviewed despite this proposed pathway. <b>Objectives:</b> The primary objective was to understand melatonin profiles in individuals with complete cervical SCI, as compared to healthy controls and those with thoracolumbar and incomplete cervical SCI. Secondary objectives were to understand the impact of injury chronicity and melatonin supplementation on melatonin values in adults with complete cervical SCI. <b>Methods:</b> This review (PROSPERO ID: CRD42017073767) searched several databases and gray literature sources from January 1978 to August 2017. Studies were eligible if they evaluated melatonin levels (blood, saliva or urinary metabolite measurements) in adults with complete cervical SCI. 390 studies were screened and 12 studies met final selection criteria. Given the heterogeneity in study designs, a narrative analysis was performed. <b>Results:</b> There is evidence that adults with complete cervical SCI have absent diurnal melatonin rhythms as compared to healthy controls and individuals with thoracolumbar SCI below T3. There is limited evidence comparing levels in individuals with incomplete tetraplegia. There is insufficient evidence describing profiles immediately (&lt;2 weeks) after cervical SCI. Based on a limited number of studies, melatonin supplementation does not appear to improve sleep outcomes in adults with long-standing complete cervical SCI. <b>Conclusions:</b> Future research should explore melatonin levels acutely after cervical SCI and the impact of supplementation on non-sleep outcomes.
DOI: 10.6084/m9.figshare.7728389
title: Effect of reverse manual wheelchair propulsion on shoulder kinematics, kinetics and muscular activity in persons with paraplegia

description: <b>Objective:</b> Shoulder pain after spinal cord injury (SCI) is attributed to increased mobility demands on the arms and negatively impacts independence and quality of life. Repetitive superior and posterior shoulder joint forces produced during traditional wheelchair (WC) locomotion can result in subacromial impingement if unopposed, as with muscular fatigue or weakness. ROWHEELS<sup>®</sup> (RW), geared rear wheels that produce forward WC movement with backward rim pulling, could alter these forces. <b>Design:</b> Cross sectional. <b>Setting:</b> Research laboratory at a rehabilitation hospital. <b>Participants:</b> Ten manual WC users with paraplegia. <b>Outcome measures:</b> Propulsion characteristics and right upper extremity/trunk kinematics and shoulder muscle activity were collected during ergometer propulsion: (1) self-selected free speed reverse propulsion with RW, (2) matched-speed reverse (rSW), and (3) forward propulsion (fSW) with instrumented Smartwheels (SW). Inverse dynamics using right-side SW rim kinetics and kinematics compared shoulder kinetics during rSW and fSW. <b>Results:</b> Free propulsion velocity, cycle distance and cadence were similar during RW, rSW and fSW. Overall shoulder motion was similar except that peak shoulder extension was significantly reduced in both RW and rSW versus fSW. Anteriorly and inferiorly directed SW rim forces were decreased during rSW versus fSW propulsion, but posteriorly and superiorly directed rim forces were significantly greater. Superior and posterior shoulder joint forces and flexor, adductor, and external rotation moments were significantly less during rSW, without a significant difference in net shoulder forces and moments. Traditional propulsive-phase muscle activity was significantly reduced and recovery-phase muscle activity was increased during reverse propulsion. <b>Conclusion:</b> These results suggest that reverse propulsion may redirect shoulder demands and prevent subacromial impingement, thereby preventing injury and preserving independent mobility for individuals with paraplegia.
DOI: 10.6084/m9.figshare.7728389.v2
title: Effect of reverse manual wheelchair propulsion on shoulder kinematics, kinetics and muscular activity in persons with paraplegia

description: <b>Objective:</b> Shoulder pain after spinal cord injury (SCI) is attributed to increased mobility demands on the arms and negatively impacts independence and quality of life. Repetitive superior and posterior shoulder joint forces produced during traditional wheelchair (WC) locomotion can result in subacromial impingement if unopposed, as with muscular fatigue or weakness. ROWHEELS<sup>®</sup> (RW), geared rear wheels that produce forward WC movement with backward rim pulling, could alter these forces. <b>Design:</b> Cross sectional. <b>Setting:</b> Research laboratory at a rehabilitation hospital. <b>Participants:</b> Ten manual WC users with paraplegia. <b>Outcome measures:</b> Propulsion characteristics and right upper extremity/trunk kinematics and shoulder muscle activity were collected during ergometer propulsion: (1) self-selected free speed reverse propulsion with RW, (2) matched-speed reverse (rSW), and (3) forward propulsion (fSW) with instrumented Smartwheels (SW). Inverse dynamics using right-side SW rim kinetics and kinematics compared shoulder kinetics during rSW and fSW. <b>Results:</b> Free propulsion velocity, cycle distance and cadence were similar during RW, rSW and fSW. Overall shoulder motion was similar except that peak shoulder extension was significantly reduced in both RW and rSW versus fSW. Anteriorly and inferiorly directed SW rim forces were decreased during rSW versus fSW propulsion, but posteriorly and superiorly directed rim forces were significantly greater. Superior and posterior shoulder joint forces and flexor, adductor, and external rotation moments were significantly less during rSW, without a significant difference in net shoulder forces and moments. Traditional propulsive-phase muscle activity was significantly reduced and recovery-phase muscle activity was increased during reverse propulsion. <b>Conclusion:</b> These results suggest that reverse propulsion may redirect shoulder demands and prevent subacromial impingement, thereby preventing injury and preserving independent mobility for individuals with paraplegia.
DOI: 10.6084/m9.figshare.7728389.v1
title: Effect of reverse manual wheelchair propulsion on shoulder kinematics, kinetics and muscular activity in persons with paraplegia

description: <b>Objective:</b> Shoulder pain after spinal cord injury (SCI) is attributed to increased mobility demands on the arms and negatively impacts independence and quality of life. Repetitive superior and posterior shoulder joint forces produced during traditional wheelchair (WC) locomotion can result in subacromial impingement if unopposed, as with muscular fatigue or weakness. ROWHEELS<sup>®</sup> (RW), geared rear wheels that produce forward WC movement with backward rim pulling, could alter these forces. <b>Design:</b> Cross sectional. <b>Setting:</b> Research laboratory at a rehabilitation hospital. <b>Participants:</b> Ten manual WC users with paraplegia. <b>Outcome measures:</b> Propulsion characteristics and right upper extremity/trunk kinematics and shoulder muscle activity were collected during ergometer propulsion: (1) self-selected free speed reverse propulsion with RW, (2) matched-speed reverse (rSW), and (3) forward propulsion (fSW) with instrumented Smartwheels (SW). Inverse dynamics using right-side SW rim kinetics and kinematics compared shoulder kinetics during rSW and fSW. <b>Results:</b> Free propulsion velocity, cycle distance and cadence were similar during RW, rSW and fSW. Overall shoulder motion was similar except that peak shoulder extension was significantly reduced in both RW and rSW versus fSW. Anteriorly and inferiorly directed SW rim forces were decreased during rSW versus fSW propulsion, but posteriorly and superiorly directed rim forces were significantly greater. Superior and posterior shoulder joint forces and flexor, adductor, and external rotation moments were significantly less during rSW, without a significant difference in net shoulder forces and moments. Traditional propulsive-phase muscle activity was significantly reduced and recovery-phase muscle activity was increased during reverse propulsion. <b>Conclusion:</b> These results suggest that reverse propulsion may redirect shoulder demands and prevent subacromial impingement, thereby preventing injury and preserving independent mobility for individuals with paraplegia.
DOI: 10.6084/m9.figshare.6994460.v1
title: Systematic review of melatonin levels in individuals with complete cervical spinal cord injury

description: <b>Context:</b> Pineal melatonin production is mediated by afferent signaling pathways that navigate through the cervicothoracic spinal cord. Melatonin profiles in individuals with complete cervical spinal cord injury (SCI) have not been systematically reviewed despite this proposed pathway. <b>Objectives:</b> The primary objective was to understand melatonin profiles in individuals with complete cervical SCI, as compared to healthy controls and those with thoracolumbar and incomplete cervical SCI. Secondary objectives were to understand the impact of injury chronicity and melatonin supplementation on melatonin values in adults with complete cervical SCI. <b>Methods:</b> This review (PROSPERO ID: CRD42017073767) searched several databases and gray literature sources from January 1978 to August 2017. Studies were eligible if they evaluated melatonin levels (blood, saliva or urinary metabolite measurements) in adults with complete cervical SCI. 390 studies were screened and 12 studies met final selection criteria. Given the heterogeneity in study designs, a narrative analysis was performed. <b>Results:</b> There is evidence that adults with complete cervical SCI have absent diurnal melatonin rhythms as compared to healthy controls and individuals with thoracolumbar SCI below T3. There is limited evidence comparing levels in individuals with incomplete tetraplegia. There is insufficient evidence describing profiles immediately (&lt;2 weeks) after cervical SCI. Based on a limited number of studies, melatonin supplementation does not appear to improve sleep outcomes in adults with long-standing complete cervical SCI. <b>Conclusions:</b> Future research should explore melatonin levels acutely after cervical SCI and the impact of supplementation on non-sleep outcomes.
DOI: 10.6084/m9.figshare.7780910
title: Validity of the Apple Watch<sup>®</sup> for monitoring push counts in people using manual wheelchairs

description: <b>Objective:</b> A recent Apple Watch<sup>®</sup> activity-monitoring innovation permits manual wheelchair users to monitor daily push counts. This study evaluated the validity of the Apple Watch<sup>®</sup> push count estimate. <b>Design:</b> Criterion validity. <b>Setting</b>: Southern Finland and Southeast Queensland, Australia. <b>Participants</b>: Twenty-six manual wheelchair users from Finland and Australia were filmed completing a standardized battery of activities while wearing the Apple Watch<sup>®</sup> (dominant wrist). <b>Outcome Measures:</b> Wheelchair pushes as determined by the Apple Watch<sup>®</sup> were compared to directly observed pushes. <b>Results:</b> Agreement between Apple Watch<sup>®</sup> push counts and directly observed pushes was evaluated using Intraclass correlation coefficients (ICC), Pearson correlations and Bland-Altman analyses. Apple Watch<sup>®</sup> pushes and directly observed push counts were strongly correlated (ICC = 0.77, <i>P</i> r = 0.84, <i>P</i> ® underestimated push counts (M = −103; 95% ULoA = 217; LLoA = −423 pushes). Mean absolute percentage error was 13.5% which is comparable to studies evaluating agreement between pedometer-based step counts and directly observed steps. <b>Conclusion:</b> Apple Watch<sup>®</sup> push-count estimates are acceptable for personal, self-monitoring purposes and for research entailing group-level analyses, but less acceptable where accurate push-count measures for an individual is required.
DOI: 10.6084/m9.figshare.7780910.v2
title: Validity of the Apple Watch<sup>®</sup> for monitoring push counts in people using manual wheelchairs

description: <b>Objective:</b> A recent Apple Watch<sup>®</sup> activity-monitoring innovation permits manual wheelchair users to monitor daily push counts. This study evaluated the validity of the Apple Watch<sup>®</sup> push count estimate. <b>Design:</b> Criterion validity. <b>Setting</b>: Southern Finland and Southeast Queensland, Australia. <b>Participants</b>: Twenty-six manual wheelchair users from Finland and Australia were filmed completing a standardized battery of activities while wearing the Apple Watch<sup>®</sup> (dominant wrist). <b>Outcome Measures:</b> Wheelchair pushes as determined by the Apple Watch<sup>®</sup> were compared to directly observed pushes. <b>Results:</b> Agreement between Apple Watch<sup>®</sup> push counts and directly observed pushes was evaluated using Intraclass correlation coefficients (ICC), Pearson correlations and Bland-Altman analyses. Apple Watch<sup>®</sup> pushes and directly observed push counts were strongly correlated (ICC = 0.77, <i>P</i> r = 0.84, <i>P</i> ® underestimated push counts (M = −103; 95% ULoA = 217; LLoA = −423 pushes). Mean absolute percentage error was 13.5% which is comparable to studies evaluating agreement between pedometer-based step counts and directly observed steps. <b>Conclusion:</b> Apple Watch<sup>®</sup> push-count estimates are acceptable for personal, self-monitoring purposes and for research entailing group-level analyses, but less acceptable where accurate push-count measures for an individual is required.