cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/g5trm4zx6r
title: Anthrax ET activates Rac1 and RTK signaling to induce F-actin reorganization and endothelial permeability , Jain et al, 2025

description: Anthrax Edema Toxin induces F-actin reorganization and edema in human Brain endothelial cells (HBMECs) in mouse footpads. Figure 1A: raw confocal images of F-actin stains (Phalloidin 488) of HBMECs used for the analyses presented in Figure 1B. Figure 1B: This data presents quantifications of F-actin fibers in untreated cells (UT), and in cells treated with ET, a mutant form of ET (ETmut) that cannot produce cAMP, and PA, the receptor-binding component of ET (ET = EF +PA). We find that ET causes a strong loss of actin stress fibers. Interestingly, ETmut and PA also induce a loss of actin stress fibers, but this phenotype is much weaker than for ET, indicating that cAMP production by EF is the main factor triggering F-actin reorganization, but that cAMP-independent effects are also at play. Figure 2C-Phalloidin: F-actin Phalloidin stains, showing Untreated HBMECs, cells treated cells with the Rac1 inhibitor NSC23766, ET-treated cells, and ET-treated cells with the Rac1 inhibitor NSC23766. Figure 2C: quantitative analysis of phalloidin stains. Rac1 inhibitor NSC23766 alleviates F-actin fiber loss by ET, indicating that Rac1 mediates ET effects on F-actin. Figure 6B-C: MEK inhibitor AS-703026, PI3K inhibitor GDC-0941 and Rac1 inhibitor NSC23766, prevent ET-induced foot pad edema in mice.
DOI: 10.17632/g5trm4zx6r.1
title: Anthrax ET activates Rac1 and RTK signaling to induce F-actin reorganization and endothelial permeability , Jain et al, 2025

description: Anthrax Edema Toxin induces F-actin reorganization and edema in human Brain endothelial cells (HBMECs) in mouse footpads. Figure 1A: raw confocal images of F-actin stains (Phalloidin 488) of HBMECs used for the analyses presented in Figure 1B. Figure 1B: This data presents quantifications of F-actin fibers in untreated cells (UT), and in cells treated with ET, a mutant form of ET (ETmut) that cannot produce cAMP, and PA, the receptor-binding component of ET (ET = EF +PA). We find that ET causes a strong loss of actin stress fibers. Interestingly, ETmut and PA also induce a loss of actin stress fibers, but this phenotype is much weaker than for ET, indicating that cAMP production by EF is the main factor triggering F-actin reorganization, but that cAMP-independent effects are also at play. Figure 2C-Phalloidin: F-actin Phalloidin stains, showing Untreated HBMECs, cells treated cells with the Rac1 inhibitor NSC23766, ET-treated cells, and ET-treated cells with the Rac1 inhibitor NSC23766. Figure 2C: quantitative analysis of phalloidin stains. Rac1 inhibitor NSC23766 alleviates F-actin fiber loss by ET, indicating that Rac1 mediates ET effects on F-actin. Figure 6B-C: MEK inhibitor AS-703026, PI3K inhibitor GDC-0941 and Rac1 inhibitor NSC23766, prevent ET-induced foot pad edema in mice.
DOI: 10.17632/hpnrd55h4c
title: A Comprehensive Rubberized Concrete Dataset for Advanced Construction Practices

description: Rubberized concrete, as a popular material, is still in the developmental stage in terms of its compressive strength research. The collection of a large-scale dataset can provide researchers with abundant experimental data, filling the gaps in existing studies. This dataset article delineates the compilation of a comprehensive dataset comprising more than 1200 rubberized concrete mixture samples, meticulously collected from 62 scholarly sources. The dataset encompasses nine input features (such as rubber content, water-to-cement ratio, etc.) and one output feature (compressive strength). As a comprehensive dataset targeting the compressive strength of rubberized concrete, it is expected to serve as a vital reference for subsequent data-driven research approaches, such as machine learning model training, meta analysis, and theoretical studies. This large-scale dataset supports not only offers valuable resources for academic research and engineering applications of rubberized concrete but also supports multiple aspects, including sustainable development, education, and training.
DOI: 10.17632/hpnrd55h4c.2
title: A Comprehensive Rubberized Concrete Dataset for Advanced Construction Practices

description: Rubberized concrete, as a popular material, is still in the developmental stage in terms of its compressive strength research. The collection of a large-scale dataset can provide researchers with abundant experimental data, filling the gaps in existing studies. This dataset article delineates the compilation of a comprehensive dataset comprising more than 1200 rubberized concrete mixture samples, meticulously collected from 62 scholarly sources. The dataset encompasses nine input features (such as rubber content, water-to-cement ratio, etc.) and one output feature (compressive strength). As a comprehensive dataset targeting the compressive strength of rubberized concrete, it is expected to serve as a vital reference for subsequent data-driven research approaches, such as machine learning model training, meta analysis, and theoretical studies. This large-scale dataset supports not only offers valuable resources for academic research and engineering applications of rubberized concrete but also supports multiple aspects, including sustainable development, education, and training.
DOI: 10.15468/dl.c5e7q7
title: Occurrence Download

description: A dataset containing 106332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Porcellio scaber",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 106332 records from 168 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026581-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/378thgyr6s.2
title: Assemblage Composition of Large Benthic Foraminifera in the Coastal Waters of Likupang, Northeastern Sulawesi, Indonesia

description: This dataset documents the diversity (species and genera) and assemblage composition of large benthic foraminifera collected from coastal waters of Likupang in northeastern Sulawesi, Indonesia, during July-August 2024. Sampling was conducted across three distinct coastal habitats: a tourism area (TA), a mangrove area (MA), and a village area (VA) (see Figure 1 and Table 1 for site details). The full dataset is provided in Tables 2-19.
DOI: 10.17632/3d8sp3tmnn.1
title: Electrokinetic Response to Seepage Type and Pressure: Experimental Insights From a Novel Self-potential Probe

description: Data associated to the paper "Electrokinetic Response to Seepage Type and Pressure: Experimental Insights From a Novel Self-potential Probe" by Liu et al. (2025), under review in the Journal of Geophysical Research: Solid Earth.
DOI: 10.17632/m3p3hx87f8
title: Fourier Transformed Infrared Spectroscopy of Pure Electrospun DegraPol® Fibers, of Emulsion Electrospun DegraPol® Fibers with Incorporated Stem cell/Tenocyte-Harvested Secretome and of Poly (ethylene glycol)

description: We provide transmission data of Fourier Transformed Infrared Spectroscopy (FTIR) assessed spectra, taken from pure electrospun DegraPol® tubes, of emulsion electrospun DegraPol® tubes with incorporated secretome harvested from a rabbit adipose-derived stem cell/rabbit Achilles tenocyte co-culture and of poly (ethylene glycol).
DOI: 10.17632/m3p3hx87f8.1
title: Fourier Transformed Infrared Spectroscopy of Pure Electrospun DegraPol® Fibers, of Emulsion Electrospun DegraPol® Fibers with Incorporated Stem cell/Tenocyte-Harvested Secretome and of Poly (ethylene glycol)

description: We provide transmission data of Fourier Transformed Infrared Spectroscopy (FTIR) assessed spectra, taken from pure electrospun DegraPol® tubes, of emulsion electrospun DegraPol® tubes with incorporated secretome harvested from a rabbit adipose-derived stem cell/rabbit Achilles tenocyte co-culture and of poly (ethylene glycol).
DOI: 10.17632/ybxbyrjxnw
title: Function of anoxygenic photosynthesis with bacteriochlorophyll in carbon sequestration in hypoxic estuarine waters

description: This study investigated the distribution of Bchls in the water columns and sediments near the Changjiang Estuary to evaluate their origins, degradation and responses to changes in the water environment.
DOI: 10.17632/ybxbyrjxnw.1
title: Function of anoxygenic photosynthesis with bacteriochlorophyll in carbon sequestration in hypoxic estuarine waters

description: This study investigated the distribution of Bchls in the water columns and sediments near the Changjiang Estuary to evaluate their origins, degradation and responses to changes in the water environment.
DOI: 10.17632/bttxys7w9v
title: Do Country Sustainability Practices Matter to Happiness

description: Research data, code&output, and readme
DOI: 10.17632/bttxys7w9v.1
title: Do Country Sustainability Practices Matter to Happiness

description: Research data, code&output, and readme
DOI: 10.17632/s5yw2p3w5z
title: Heat tolerance mechanisms in bread wheat: Insights from flag leaves and spike tissues.

description: Description of the data and file structure

This data was collected to study the effects of heat stress during ear peep in wheat genotypes with contrasting heat tolerance (Tolerant: RAJ3765, HD2932 and Susceptible: HD2329, HD2733) on physiology, yield and yield components, and proteomics of flag leaves and spike tissues. 

The figures, tables, and supplementary figures in this study were prepared using the data provided in the supplementary tables.

The supplementary data

Supplementary Table S1-S10.xlsx

Supplementary Figures S1-S6 and Methods.pdf

Other publicly accessible locations of the data:

 All mass spectrometry proteomics data has been deposited into the ProteomeXchange Consortium via the PRIDE. The dataset is available via ProteomeXchange with the identifier PXD048499.
DOI: 10.17632/s5yw2p3w5z.3
title: Heat tolerance mechanisms in bread wheat: Insights from flag leaves and spike tissues.

description: Description of the data and file structure

This data was collected to study the effects of heat stress during ear peep in wheat genotypes with contrasting heat tolerance (Tolerant: RAJ3765, HD2932 and Susceptible: HD2329, HD2733) on physiology, yield and yield components, and proteomics of flag leaves and spike tissues. 

The figures, tables, and supplementary figures in this study were prepared using the data provided in the supplementary tables.

The supplementary data

Supplementary Table S1-S10.xlsx

Supplementary Figures S1-S6 and Methods.pdf

Other publicly accessible locations of the data:

 All mass spectrometry proteomics data has been deposited into the ProteomeXchange Consortium via the PRIDE. The dataset is available via ProteomeXchange with the identifier PXD048499.
DOI: 10.17632/jfgy7yfcx8.4
title: Data for Manuscript "Pacific Equatorial Rossby Waves Can Trigger the Equilibrium State Transitions Within the Mindanao-New Guinea Confluence"

description: The modeled output data used in the paper entitled "Pacific Equatorial Rossby Waves Can Trigger the Equilibrium State Transitions Within the Mindanao-New Guinea Confluence"
which has been submiited to Journal of Physical Oceanography. 
It should be mentioned that the full data of model ouputs needs a huge stroage up to 4TB, thus here the data only contains the data that can be used to reproduce the figures in the paper.
DOI: 10.15468/dl.84x95a
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capra hircus",
 "Country is Grenada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026640-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/t3hf6s82t4.1
title: Replication data for "Electricity Access and Perceived Corruption as Drivers of Renewable Energy Utilization: Evidence from 42 European Countries"
DOI: 10.17632/7h44dss3hj
title: EspressoPro ML models

description: Pre-trained machine learning models (.joblib) for cell type annotation of protein data derived from peripheral blood (PB) and bone marrow (BM) mononuclear cells (MNCs) using the Mission Bio Tapestri platform.
DOI: 10.17632/7h44dss3hj.1
title: EspressoPro ML models

description: Pre-trained machine learning models (.joblib) for cell type annotation of protein data derived from peripheral blood (PB) and bone marrow (BM) mononuclear cells (MNCs) using the Mission Bio Tapestri platform.
DOI: 10.17632/3vnfg9tt5p
title: Fatigue_Lancet Respiratory Medicine

description: Dataset used for the paper entitled: Determinants of long-term fatigue in critical illness survivors: a prospective longitudinal multicentre study, by Piva S. et al.
DOI: 10.15468/dl.mwwm3y
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Piaya mexicana"
 ]
}

 The dataset includes 65 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026641-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/3vnfg9tt5p.1
title: Fatigue_Lancet Respiratory Medicine

description: Dataset used for the paper entitled: Determinants of long-term fatigue in critical illness survivors: a prospective longitudinal multicentre study, by Piva S. et al.
DOI: 10.15468/dl.mghd5p
title: Occurrence Download

description: A dataset containing 2163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Scyphophorus acupunctatus",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2163 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026639-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f6cjyh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Scyphophorus acupunctatus",
 "OccurrenceStatus is Absent"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026642-250811113504898/datasets/export for details.
DOI: 10.17632/hbkxmbxsnp
title: Glacier-Snow Melting Water Reshapes the Runoff Patterns of the Three-River Headwater Region in the Period 1985–2019

description: This dataset provides basic environmental element data for the Tuotuohe station from 1985 to 2019, including temperature, precipitation, evaporation, and more
DOI: 10.17632/hbkxmbxsnp.1
title: Glacier-Snow Melting Water Reshapes the Runoff Patterns of the Three-River Headwater Region in the Period 1985–2019

description: This dataset provides basic environmental element data for the Tuotuohe station from 1985 to 2019, including temperature, precipitation, evaporation, and more
DOI: 10.17632/kgngzzs5c8.4
title: Text Script Analytics Code for Automatic Video Generation

description: This Python notebook (research work) provides a comprehensive solution for text analysis and hint extraction that will be useful for making computational scenes using input text .

It includes a collection of functions that can be used to preprocess textual data, extract information such as characters, relationships, emotions, dates, times, addresses, locations, purposes, and hints from the text.

Key Features:

Preprocessing Collected Data: The notebook offers preprocessing capabilities to remove unwanted strings, normalize text data, and prepare it for further analysis.
Character Extraction: The notebook includes functions to extract characters from the text, count the number of characters, and determine the number of male and female characters.
Relationship Extraction: Functions are provided to calculate possible relationships among characters and extract the relationship names.
Dominant Emotion Extraction: The notebook includes a function to extract the dominant emotion from the text.
Date and Time Extraction: Functions are available to extract dates and times from the text, including handling phrases like "before," "after," "in the morning," and "in the evening."
Address and Location Extraction: The notebook provides functions to extract addresses and locations from the text, including identifying specific places like offices, homes, rooms, or bathrooms.
Purpose Extraction: Functions are included to extract the purpose of the text.
Hint Collection: The notebook offers the ability to collect hints from the text based on specific keywords or phrases.
Sample Implementations: Sample Python code is provided for each function, demonstrating how to use them effectively.
This notebook serves as a valuable resource for text analysis tasks, assisting in extracting essential information and hints from textual data. It can be used in various domains such as natural language processing, sentiment analysis, and information retrieval. The code is well-documented and can be easily integrated into existing projects or workflows.
DOI: 10.17632/66jh2hxz2w
title: Segment-specific axon guidance by Wnt/Fz signaling diversifies motor commands in Drosophila larvae (Takagi et al.)

description: This ZIP file contains raw data and analyses codes used in Takagi et al 2025.
Each folder contains raw data (in CSV format) as well as R codes (in TXT format; R version 4.1.1) that are used to generate figures and to calculate statistical significances.
DOI: 10.17632/66jh2hxz2w.1
title: Segment-specific axon guidance by Wnt/Fz signaling diversifies motor commands in Drosophila larvae (Takagi et al.)

description: This ZIP file contains raw data and analyses codes used in Takagi et al 2025.
Each folder contains raw data (in CSV format) as well as R codes (in TXT format; R version 4.1.1) that are used to generate figures and to calculate statistical significances.
DOI: 10.17632/5rhkjgy792
title: Klebsiella pneumoniae induced ferroptosis by inhibition of the Nrf2/xCT/GPX4 pathway in bovine mastitis: in vivo and in vitro

description: Klebsiella pneumoniae (K. pneumoniae), a prominent causative agent of mastitis in dairy cattle, remains enigmatic in its pathogenic mechanisms. This study aimed to reveal the effects of K. pneumoniae on mammary glands via the induction of ferroptosis, as well as the protective role of Ferrostatin-1 (Fer-1) against this pathogen-mediated damage in bovine mammary epithelial cells (BMECs). Holstein cows were used to establish an intramammary infection model of K. pneumoniae. In vitro, primary BMECs were treated with 10 μM Fer-1 and K. pneumoniae alone or in combination. The results showed that mammary glands infected with K. pneumoniae exhibited increased transcriptional levels of interleukin (IL)-1β, IL-6, IL-8, and tumor necrosis factor-α (TNF-α). Concurrently, significant elevations in iron, 4-hydroxynonenal, and reactive oxygen species (ROS) levels were observed. Conversely, K. pneumoniae infection downregulated nuclear factor erythroid 2-related factor 2 (Nrf2), cystine/glutamate antiporter (xCT), glutathione peroxidase 4 (GPX4), and glutathione levels. Following K. pneumoniae invasion, intracellular Fe2+ and lipid ROS accumulated in the BMECs, impeding activation of Nrf2/xCT/GPX4 signal transduction. Additionally, Fer-1 facilitated the nuclear translocation of Nrf2 protein, upregulating the protein levels of Nrf2/xCT/GPX4 while downregulation transcriptional levels of IL-1β, IL-6, IL-8, and TNF-α. In conclusion, Fer-1 alleviates K. pneumoniae-induced inflammatory factor activation and ferroptosis in BMECs via upregulation of the Nrf2/xCT/GPX4 pathway, supporting ferroptosis inhibition holds promise as a feasible therapeutic agent for the control of mastitis.
DOI: 10.17632/5rhkjgy792.4
title: Klebsiella pneumoniae induced ferroptosis by inhibition of the Nrf2/xCT/GPX4 pathway in bovine mastitis: in vivo and in vitro

description: Klebsiella pneumoniae (K. pneumoniae), a prominent causative agent of mastitis in dairy cattle, remains enigmatic in its pathogenic mechanisms. This study aimed to reveal the effects of K. pneumoniae on mammary glands via the induction of ferroptosis, as well as the protective role of Ferrostatin-1 (Fer-1) against this pathogen-mediated damage in bovine mammary epithelial cells (BMECs). Holstein cows were used to establish an intramammary infection model of K. pneumoniae. In vitro, primary BMECs were treated with 10 μM Fer-1 and K. pneumoniae alone or in combination. The results showed that mammary glands infected with K. pneumoniae exhibited increased transcriptional levels of interleukin (IL)-1β, IL-6, IL-8, and tumor necrosis factor-α (TNF-α). Concurrently, significant elevations in iron, 4-hydroxynonenal, and reactive oxygen species (ROS) levels were observed. Conversely, K. pneumoniae infection downregulated nuclear factor erythroid 2-related factor 2 (Nrf2), cystine/glutamate antiporter (xCT), glutathione peroxidase 4 (GPX4), and glutathione levels. Following K. pneumoniae invasion, intracellular Fe2+ and lipid ROS accumulated in the BMECs, impeding activation of Nrf2/xCT/GPX4 signal transduction. Additionally, Fer-1 facilitated the nuclear translocation of Nrf2 protein, upregulating the protein levels of Nrf2/xCT/GPX4 while downregulation transcriptional levels of IL-1β, IL-6, IL-8, and TNF-α. In conclusion, Fer-1 alleviates K. pneumoniae-induced inflammatory factor activation and ferroptosis in BMECs via upregulation of the Nrf2/xCT/GPX4 pathway, supporting ferroptosis inhibition holds promise as a feasible therapeutic agent for the control of mastitis.
DOI: 10.17632/bk5dmtj7fm
title: Wallenius and Sivan et al., 2025 (methanogenesis time series_data)

description: All the data used in the study are uploaded in this repository.
DOI: 10.17632/bk5dmtj7fm.1
title: Wallenius and Sivan et al., 2025 (methanogenesis time series_data)

description: All the data used in the study are uploaded in this repository.
DOI: 10.15468/dl.bchm9f
title: Occurrence Download

description: A dataset containing 1088 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Platanthera integra"
 ]
}

 The dataset includes 1088 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026643-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/s989hwht9r
title: MFI Performance and Gender

description: Replication files for "" with Moh'd Al-Azzam and David H. Bernstein. Codes estimates a four component stochastic frontier model of various MFI types and also considers determinants of time varying inefficiency based on various measurements of gender diversity of both the clientele of the MFI and the employment structure of the MFI.
DOI: 10.17632/s989hwht9r.1
title: MFI Performance and Gender

description: Replication files for "" with Moh'd Al-Azzam and David H. Bernstein. Codes estimates a four component stochastic frontier model of various MFI types and also considers determinants of time varying inefficiency based on various measurements of gender diversity of both the clientele of the MFI and the employment structure of the MFI.
DOI: 10.17632/cygb7p74xv
title: Supplementary materials

description: Supplementary TableS1 and TableS2
DOI: 10.17632/cygb7p74xv.1
title: Supplementary materials

description: Supplementary TableS1 and TableS2