cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.u8npsu
title: Occurrence Download

description: A dataset containing 43213 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carcharhinus limbatus (Müller & Henle, 1839)"
 ]
}

 The dataset includes 43213 records from 153 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130223-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xc7jnb
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trioceros ntunte (Necas, Modry & Slapeta, 2005)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0274225-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f9rtjx
title: Occurrence Download

description: A dataset containing 1662 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is NHMD Biocultural Botany Collection"
 ]
}

 The dataset includes 1662 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130235-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dq564w
title: Occurrence Download

description: A dataset containing 927485 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada",
 "Country is Mexico"
 ]
 },
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Falco peregrinus Tunstall, 1771",
 "Year 1923-2022"
 ]
}

 The dataset includes 927485 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222286-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xamuy6
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tshekardominidae",
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021439-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7t7gad
title: Occurrence Download

description: A dataset containing 4689 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-107.45906 25.94478,-92.27796 25.94478,-92.27796 36.78842,-107.45906 36.78842,-107.45906 25.94478))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Crataegus L."
 ]
}

 The dataset includes 4689 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015633-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vgbpc3
title: Occurrence Download

description: A dataset containing 4539 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "GadmGid is one of (COL.14.103_1)"
 ]
}

 The dataset includes 4539 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0280454-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hz4ec6
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea peregrina H.J.Coste & Sennen"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130241-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8kukk
title: Occurrence Download

description: A dataset containing 160 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gekko yakuensis Matsui & Okada, 1968"
 ]
}

 The dataset includes 160 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0280459-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6wkx2j
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Kinosternon hirtipes (Wagler, 1830)",
 "Year 2013-2023"
 ]
}

 The dataset includes 101 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130242-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tajxec
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micrurus collaris (Schlegel, 1837)"
 ]
}

 The dataset includes 20 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0280458-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2dzjhb
title: Occurrence Download

description: A dataset containing 568 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macrophiothrix longipeda (Lamarck, 1816)"
 ]
}

 The dataset includes 568 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036709-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6e4wsg
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrobium darjeelingense Pradhan"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022478-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4cra2b
title: Occurrence Download

description: A dataset containing 49783 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lymantria dispar Linnaeus, 1758"
 ]
}

 The dataset includes 49783 records from 336 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222302-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ueh9b4
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zizaniopsis villanensis Quarín"
 ]
}

 The dataset includes 16 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036710-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xxgckc
title: Occurrence Download

description: A dataset containing 176 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera tigris altaica Temminck, 1844"
 ]
}

 The dataset includes 176 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023048-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vh9z5r
title: Occurrence Download

description: A dataset containing 2009 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lagocephalus laevigatus (Linnaeus, 1766)"
 ]
}

 The dataset includes 2009 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222288-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ur82m
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección de microorganismos del Instituto SINCHI (COLMIS)"
 ]
}

 The dataset includes 71 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0422388-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hckvc8
title: Occurrence Download

description: A dataset containing 160 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Lamourouxia (Orobanchaceae) of Mexico"
 ]
}

 The dataset includes 160 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130269-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tx74ve
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Material sample"
 ]
 },
 "TaxonKey is Attila spadiceus pacificus Hellmayr, 1929"
 ]
}

 The dataset includes 130 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222297-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mcjmfj
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea ×bigerrensis Pau"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130260-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8314875
title: Vietnam SARS-CoV-2 | COVID-19 Data
DOI: 10.15468/dl.vz22wa
title: Occurrence Download

description: A dataset containing 3358 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is COL.19.19_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is EN",
 "TaxonKey is Aves",
 "Year 1000-2022"
 ]
}

 The dataset includes 3358 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222303-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rg47ss
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea phlomoides Boiss. & Hausskn."
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130271-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vtz4jr
title: Occurrence Download

description: A dataset containing 246 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristurus flavipunctatus Rüppell, 1835"
 ]
}

 The dataset includes 246 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0280455-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.khw9fm
title: Occurrence Download

description: A dataset containing 264 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea prolongoi Boiss. ex DC."
 ]
}

 The dataset includes 264 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130336-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k2r372
title: Occurrence Download

description: A dataset containing 7076556 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Great Backyard Bird Count"
 ]
}

 The dataset includes 7076556 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222300-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85337m
title: Occurrence Download

description: A dataset containing 11961 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Loxia curvirostra Linnaeus, 1758",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2022",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 11961 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130245-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b2yy4k
title: Occurrence Download

description: A dataset containing 423921 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is COL.19.19_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is LC",
 "TaxonKey is Aves",
 "Year 1000-2022"
 ]
}

 The dataset includes 423921 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222314-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bgkamf
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is New species and new country records for Neotropical Cerambycinae (Coleoptera, Cerambycidae)"
 ]
}

 The dataset includes 12 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130234-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c4uw5d
title: Occurrence Download

description: A dataset containing 7463 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is USA.47_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Anatidae",
 "Year 2020-2022"
 ]
}

 The dataset includes 7463 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222316-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zphmuc
title: Occurrence Download

description: A dataset containing 1657 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-39.87909 -19.53992,-39.84733 -19.56715,-39.81465 -19.5844,-39.82373 -19.65974,-39.72933 -19.60891,-39.75928 -19.48093,-39.87909 -19.53992))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1657 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130255-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m85djy
title: Occurrence Download

description: A dataset containing 1877 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melipona quadrifasciata Lepeletier, 1836"
 ]
}

 The dataset includes 1877 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020319-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vp7eu9
title: Occurrence Download

description: A dataset containing 310 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is A synopsis of Phyllogomphoides Belle, 1970 (Odonata: Gomphidae) of Mexico: taxonomy and distribution"
 ]
}

 The dataset includes 310 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130256-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eabtst
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Parablennius sierraensis Bath, 1990"
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0223732-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.27ub6m
title: Occurrence Download

description: A dataset containing 10424 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Linaria flavirostris (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2022",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 10424 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130233-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbxf35
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Peru",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Vicugna vicugna (Molina, 1782)"
 ]
}

 The dataset includes 31 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222320-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qy4c44
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trigonella aristata Vassilcz."
 ]
}

 The dataset includes 31 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021493-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hncpdf
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((9.54288 -14.27817,48.45712 -14.27817,48.45712 1.27817,9.54288 1.27817,9.54288 -14.27817))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ertzia B.P.Hodk. & Lücking, 2014"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0422969-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dv6pqz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trigonella media Delile ex Urb."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021444-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xju9mp
title: Occurrence Download

description: A dataset containing 450 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maesopsis eminii Engl.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 450 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013975-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11093178
title: DeepSEA complete datasets and code

description: Surveying antimicrobial resistance (AMR) is essential to track the evolution and spread of resistant genes/proteins since AMR is a major cause of death, being responsible for more deaths than HIV and malaria combined.  Alignment-based annotation tools use strict similarity (>70%) cutoffs to distinguish between potential and AMR real sequences and only annotate proteins similar to those in their databases. DeepARG and AMRFinderPlus use artificial neural networks (ANN) and Hidden Markov Models (HMM) to annotate AMR proteins with remote homology. However, DeepARG needs a pre-processing step that aligns the query data and selects the most probable proteins, although the filtering uses looser cutoffs. HMMs also depend on multi-sequence alignment (MSA) and are focused on a single AMR class. Here we present DeepSEA, an alignment-free tool fitted on antimicrobial resistant proteins (APR) and non-resistant proteins (NRP) aligned and unaligned to ARP. Our results show that DeepSEA outperforms the current multi-class AMR classifiers. Furthermore, DeepSEA’s model can cluster AMR by resistant mechanisms, showing that the model's latent variables successfully captured distinguishing features of antibiotic resistance. Our tool annotated functionally validated tetracycline destructases (TDases) and confirmed the identification of a novel TDase found by HMM.