cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18434/m31908
title: GI625 optical fiber data imaged on a Zeiss Versa XRM-500 microCT at 12 tube voltages

description: This is tomography data as acquired using a commercial X-ray tomography instrument. We obtained reconstructions of a graded-index optical fiber with voxels of edge length 1.05 µm at 12 tube voltages. The fiber manufacturer created a graded index in the central region by varying the germanium concentration from a peak value in the center of the core to a very small value at the core-cladding boundary. Operating on 12 tube voltages, we show by a singular value decomposition that there are only two singular vectors with significant weight. Physically, this means scans beyond two tube voltages contain largely redundant information. We concentrate on an analysis of the images associated with these two singular vectors. The first singular vector is dominant and images of the coefficients of the first singular vector at each voxel look are similar to any of the single-energy reconstructions. Images of the coefficients of the second singular vector by itself appear to be noise. However, by averaging the reconstructed voxels in each of several narrow bands of radii, we can obtain values of the second singular vector at each radius. In the core region, where we expect the germanium doping to go from a peak value at the fiber center to zero at the core-cladding boundary, we find that a plot of the two coefficients of the singular vectors forms a line in the two-dimensional space consistent with the dopant decreasing linearly with radial distance from the core center. The coating, made of a polymer rather than silica, is not on this line indicating that the two-dimensional results are sensitive not only to the density but also to the elemental composition. A stack of reconstructions are given here as tiff files of individual slices. Each zip file corresponds to a tilt series at a given tube voltage, given in the file name. The power is also given in the file name. (For example, file “30kV-2W.zip” was tube voltage at 30kV, power 2W.) The power was varied so that the signal-to-noise was approximately equal for the various reconstructions. The experiment is described in: ZH Levine, AP Peskin, EJ Garboczi, and AD Holmgren, Multi-Energy X-Ray Tomography of an Optical Fiber: The Role of Spatial Averaging, Microscopy and Microanalysis 25 (1) 70-76 (2019). https://doi.org/10.1017/S1431927618016136
DOI: 10.5281/zenodo.3560994
title: Carbon stocks from rangeland riparian restoration, northern California

description: Data on carbon accumulation in soils and woody biomass as a result of rangeland riparian restoration in northern California. These data accompany a paper currently in submission and will be embargoed until publication.
DOI: 10.18112/openneuro.ds000222.v1.0.0
title: Sequential Inference VBM
DOI: 10.18430/m33eo3
title: X-ray diffraction data for the crystal structure of the N-acetylmannosamine kinase domain of human GNE protein (3EO3)
DOI: 10.18430/m33feh
title: X-ray diffraction data for the crystal structure of full length centaurin alpha-1 (3FEH)
DOI: 10.18430/m33fm8
title: X-ray diffraction data for the crystal structure of full length centaurin alpha-1 bound with the FHA domain of KIF13B (CAPRI target) (3FM8)
DOI: 10.18430/m33lju
title: X-ray diffraction data for the crystal structure of full length centaurin alpha-1 bound with the head group of PIP3 (3LJU)
DOI: 10.18430/m33uwp
title: X-ray diffraction data for the crystal structure of Dot1l in complex with 5-iodotubercidin (3UWP)
DOI: 10.18430/m34fl6
title: X-ray diffraction data for the crystal structure of the complex of the 3-MBT repeat domain of L3MBTL3 and UNC1215 (4FL6)
DOI: 10.18430/m34o61
title: X-ray diffraction data for the structure of human ALKBH5 crystallized in the presence of citrate (4O61)
DOI: 10.18430/m34oct
title: X-ray diffraction data for the crystal structure of human ALKBH5 crystallized in the presence of Mn^{2+} and 2-oxoglutarate (4OCT)
DOI: 10.5281/zenodo.3560298
title: Low Cost Environmental Sensor Readings Inside a Controlled Climatic Chamber

description: Readings of low-cost environmental sensors from experiments inside a controlled climatic chamber reproducing different levels of temperature and humidity. Models used are (T - Temperature; H- Humidity; P - Pressure): DS18B20 (T), AM2302 (T, H), HTU21D (T, H), BMP180 (T, P), BME280 (T, H, P) and MPL3115A2 (T, P). Three units of each sensor is used, forming three different sensor groups. Each group contains six different sensor units. Six diffferent executions were taken inside the chamber, with two groups ate each execution. Each execution lasts about 48h.
DOI: 10.5281/zenodo.3560299
title: Low Cost Environmental Sensor Readings Inside a Controlled Climatic Chamber

description: Readings of low-cost environmental sensors from experiments inside a controlled climatic chamber reproducing different levels of temperature and humidity. Models used are (T - Temperature; H- Humidity; P - Pressure): DS18B20 (T), AM2302 (T, H), HTU21D (T, H), BMP180 (T, P), BME280 (T, H, P) and MPL3115A2 (T, P). Three units of each sensor is used, forming three different sensor groups. Each group contains six different sensor units. Six diffferent executions were taken inside the chamber, with two groups ate each execution. Each execution lasts about 48h.
DOI: 10.18430/m33me3
title: X-ray diffraction data for the activator-Bound Structure of Human Pyruvate Kinase M2 (3ME3)
DOI: 10.18430/m33me9
title: X-ray diffraction data for the crystal structure of SGF29 in complex with H3K4me3 peptide (3ME9)
DOI: 10.18430/m33mea
title: X-ray diffraction data for the crystal structure of the SGF29 in complex with H3K4me3 (3MEA)
DOI: 10.18430/m33u2z
title: X-ray diffraction data for the activator-Bound Structure of Human Pyruvate Kinase M2 (3U2Z)
DOI: 10.5281/zenodo.3560562
title: Northeast Atlantic pelagic species catch statistics_2005-2016

description: Annual catches of capelin, NSSH, NE Atlantic mackerel and blue whiting in the NE-Atlantic by country and catch area. Data used for developing climate adaptation plans within the ClimeFish project..
DOI: 10.5281/zenodo.3560563
title: Northeast Atlantic pelagic species catch statistics_2005-2016

description: Annual catches of capelin, NSSH, NE Atlantic mackerel and blue whiting in the NE-Atlantic by country and catch area. Data used for developing climate adaptation plans within the ClimeFish project..
DOI: 10.18112/openneuro.ds000235.v1.0.0
title: Whole-brain background-suppressed pCASL MRI with 1D-accelerated 3D RARE Stack-Of-Spirals Readout- Dataset 2
DOI: 10.18419/darus-477/1
title: productmmc.gro

description: Cartesian coordinates of a single product molecule in .gro format
DOI: 10.18419/darus-477/2
title: index_unmodified.ndx

description: Index file of the simulation box of the unmodified pore in .ndx format
DOI: 10.5281/zenodo.3560568
title: Icelandic pelagic fishing vessels_Production_Exports_CatchValues_2005-2018

description: Number of ships in Iceland, gross tonnage (GT), power (kW) and home ports. Pelagic catches by species, landing value, export value, production etc.
description: Data used as background for development of climate adaptation plans in the ClimeFish project
DOI: 10.5281/zenodo.3560569
title: Icelandic pelagic fishing vessels_Production_Exports_CatchValues_2005-2018

description: Number of ships in Iceland, gross tonnage (GT), power (kW) and home ports. Pelagic catches by species, landing value, export value, production etc.
description: Data used as background for development of climate adaptation plans in the ClimeFish project
DOI: 10.5281/zenodo.3561113
title: Meta-analysis of multiple ion uptake kinetics in crop roots

description: This dataset collates measures of Michaelis-Menten root uptake parameters for several nutrients based on reported literature. The analysis appears in a submitted review article by Marcus Griffiths (mdgriffiths at noble.org) and Larry York (lmyork at noble.org). The citation will be added upon acceptance and online publication. The R script assumes that all data files are in the working directory and that the "tidyverse" meta-package is installed. <strong>Kinetics_metaanalysis_all_files.zip</strong> - Contains all the files.<br> <br> <strong>Kinetics_metaanalysis_column_definitions.txt </strong>- Definitions of column names used in data files (not used by R script)<br> <br> <strong>Kinetics_metaanalysis_csv.csv </strong>- Complete dataset in CSV format<strong> </strong>(used by R script)<br> <br> <strong>Kinetics_metaanalysis_excel.xlsx</strong> - Complete dataset in Excel format (not used by R script)<br> <br> <strong>Kinetics_metaanalysis_figure_subset.csv </strong>- Subset of total data used for figure generation (used by R script)<br> <br> <strong>Kinetics_metaanalysis_figures_code.R </strong>- Required R script for statistical analysis
DOI: 10.18112/openneuro.ds000222.v1.0.1
title: Sequential Inference VBM
DOI: 10.18419/darus-477/3
title: benzene.gro

description: Cartesian coordinates of a single benzene molecule in .gro format
DOI: 10.18419/darus-477/4
title: box_unmodified.gro

description: Cartesian coordinates of the simulation box of the unmodified pore in .gro format
DOI: 10.18419/darus-477/5
title: eductl.gro

description: Cartesian coordinates of a single substrate molecule in .gro format
DOI: 10.18419/darus-477/6
title: benzene.gro

description: Cartesian coordinates of a single benzene molecule in .gro format
DOI: 10.18419/darus-477/7
title: box_modified.gro

description: Cartesian coordinates of the simulation box of the modified pore in .gro format
DOI: 10.5525/gla.researchdata.635
title: Noise characteristics with CMOS Sensor Array Scaling

description: The dataset show results on experimental analysis of three different arrays of sensors: a 256x256 ISFET array, a 32x32 array of Single Photon Avalanche Diode (SPAD) and a 16x16 PD array.
DOI: 10.18419/darus-477/8
title: min.mdp

description: Simulation parameter file of the energy-minimization step in .mdp format
DOI: 10.18419/darus-477/9
title: nvt.mdp

description: Simulation parameter file of the equilibration step in .mdp format
DOI: 10.5523/bris.uj53x9tqzu8x2eiywhnee3up1
title: WrapToR composite truss structures Measurement and modelling of mechanical response

description: This data set is for the paper entitled: "WrapToR composite truss structures: Measurement and modelling of mechanical response "
DOI: 10.18419/darus-477/10
title: run.mdp

description: Simulation parameter file of the production step in .mdp format
DOI: 10.18430/m33lx7
title: X-ray diffraction data for the crystal structure of a Novel Tudor domain-containing protein SGF29 (3LX7)
DOI: 10.25345/c5539h
title: MassIVE MSV000084651 - Source Identification - Passive Samplers (Biomass/Crumb Rubber/ECig/Field)
title: We both apply passive samplers (PDMS) in controlled chamber experiments to characterize sources (e-cigarettes, biomass burning, and crumb rubber / tire emissions) and in relevant populations (India and Africa, biomass burning, Montreal and United States, vehicle emissions and e-cigarettes). Gas chromatography high resolution mass spectrometry was used to directly measure volatile and semi-volatile compounds from passive samplers, and non-targeted peak detection and molecular networks were performed to classify molecules by fragmentation spectra. Suspect screening using a unique set of filtering parameters (retention index, reverse EI spectral matching, and reverse high resolution matching scores) to provide higher confidence identifications was performed. A software was written to automatically link compounds to database information (CPCat, CPDat, and DSSTox) using respective CAS numbers. A software was developed which rapidly combines source information and predicted environmental fate, transport and toxicity to feature tables obtained from any experiment (LCMS, GCMS, etc.) using CAS numbers. Our results show that on average, for a single detected compound, over 10 uses/sources can be determined, with certain compounds having over 100 source categorizations. By linking molecular networks based on EI spectral similarity, connections between EI derived molecular structure characteristics and predicted toxicity and molecular structure and source information using CPCat were determined using DSSTox and CPCat databases, respectively.
DOI: 10.5281/zenodo.3561000
title: Data for "Mobility enhancement in graphene by in situ reduction of random strain fluctuations"

description: Data for "Mobility enhancement in graphene by in situ reduction of random strain fluctuations"
DOI: 10.5281/zenodo.3561081
title: Recombination and aneuploidy data for: Insights about variation in meiosis from 31,228 human sperm genomes

description: This repository holds crossover and aneuploidy data for 31,228 human sperm genomes sequenced with Sperm-seq. Data are described in the preprint/paper "Insights about variation in meiosis from 31,228 human sperm genomes." Several levels of data are available, e.g., each crossover (allcrossovers_hg38.txt.gz) and the numbers of crossovers detected per sperm cell (numbercrossoverspercell.txt.gz). Each data file is described in its own readme, so README_allgainsdivisionoforigin.txt explains the data present in allgainsdivisionoforigin.txt. All files are either text files or text files compressed via gzip. All data was generated as described in the preprint/paper, using scripts available in the companion repository (most recent version DOI: 10.5281/zenodo.3561080). This new version has updated sex chromosome ploidies after identifying a minor coding error affecting ~24 cells (sexchromosomeploidy.txt.gz) and includes more detail about possible crossover error modes (README_allcrossovers_hg38.txt.gz).
DOI: 10.25345/c51966
title: MassIVE MSV000084652 - GNPS - Corn silage samples 2017-2018
title: Foodomics protocol for extraction and processing of corn silage samples. Samples courtesy of Barry Bradford and Caroline Ylijoa, Kansas State University.
DOI: 10.5281/zenodo.3561071
title: IO Islamic 1438. Ḥabîb-alsiyar, General History, Second Volume

description: IO Islamic 1438. Ḥabîb-alsiyar, General History, Second Volume
DOI: 10.5281/zenodo.3561070
title: IO Islamic 1438. Ḥabîb-alsiyar, General History, Second Volume

description: IO Islamic 1438. Ḥabîb-alsiyar, General History, Second Volume
DOI: 10.5519/qd.u6lexvu1
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.21227/01sg-n605
title: Validation of IEEE 802.11 DCF and Optimization of RTS Threshold

description: Distributed coordination function (DCF) is an important technique of medium access control (MAC), utilized by IEEE 802.11 wireless local area networks.
DOI: 10.5281/zenodo.3561024
title: Example data for "A 6-nm ultra-photostable DNA FluoroCube for fluorescence imaging"

description: This project is described in: A 6-nm ultra-photostable DNA FluoroCube for fluorescence imaging (2019) and can be found on BioRxiv: https://www.biorxiv.org/content/10.1101/716787v1 and at Nature Methods: https://www.nature.com/articles/s41592-020-0782-3 Here, we provide example raw datasets of the DNA FluoroCubes with six dyes, Single Dye Cubes, one dye double-stranded DNA constructs, single, biotinylated dyes, and Compact Cube used to determine the photophysical properties. In the zip folder you will find the following datasets with raw, example total internal reflection fluorescence (TIRF) microscopy movies: - FluoroCube_Movies which includes the following movies:<br> - ATTO-488_FluoroCube<br> - ATTO-565_FluoroCube<br> - ATTO-647N_FluoroCube<br> - Cy3_FluoroCube<br> - Cy3N_FluoroCube<br> - Cy5_FluoroCube<br> <br> - Single-Dye-Cube_AND_dsDNA_Movies which includes the following movies:<br> - ATTO-488_dsDNA_single-dye<br> - ATTO-488_Single-Dye-Cube_single-dye<br> - ATTO-565_dsDNA_single-dye<br> - ATTO-565_Single-Dye-Cube_single-dye<br> - ATTO-647N_dsDNA_single-dye<br> - ATTO-647N_Single-Dye-Cube_single-dye<br> - Cy3_dsDNA_single-dye<br> - Cy3_Single-Dye-Cube_single-dye<br> - Cy3N_dsDNA_single-dye<br> - Cy3N_Single-Dye-Cube_single-dye<br> - Cy5_dsDNA_single-dye<br> - Cy5_Single-Dye-Cube_single-dye<br> <br> - Single-biotinylated-dye_AND_dsDNA_Movies which includes the following movies:<br> - ATTO-488_dsDNA_single-dye<br> - ATTO-488_single-biotinylated-dye<br> - ATTO-647N_dsDNA_single-dye<br> - ATTO-647N_single-biotinylated-dye<br> - Cy3_dsDNA_single-dye<br> - Cy3_single-biotinylated-dye<br> <br> - Cy3N_Single-Dye-Cube_all-positions_Movies which includes the following movies:<br> - Cy3N_Single-Dye-Cube_SDC-01_single-dye<br> - Cy3N_Single-Dye-Cube_SDC-02_single-dye<br> - Cy3N_Single-Dye-Cube_SDC-03_single-dye<br> - Cy3N_Single-Dye-Cube_SDC-04_single-dye<br> - Cy3N_Single-Dye-Cube_SDC-05_single-dye<br> - Cy3N_Single-Dye-Cube_SDC-06_single-dye<br> <br> - Compact-Cube_Movies which includes the following movies:<br> - Cy3_FluoroCube_six-dyes<br> - Cy3_Single-Dye-Cube_single-dye<br> - Cy3_Compact-Cube_six-dyes<br> - Cy3_Compact-Cube_single-dye
DOI: 10.5281/zenodo.3561072
title: IO Islamic 1787. Ḥabîb-alsiyar, General History, Second Volume

description: IO Islamic 1787. Ḥabîb-alsiyar, General History, Second Volume
DOI: 10.5281/zenodo.3561073
title: IO Islamic 1787. Ḥabîb-alsiyar, General History, Second Volume

description: IO Islamic 1787. Ḥabîb-alsiyar, General History, Second Volume
DOI: 10.5519/qd.44y8jrzs
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.21227/agbv-3458
title: IEEE 802.11

description: Distributed coordination function (DCF) is an important technique of medium access control (MAC), utilized by IEEE 802.11 wireless local area networks.
DOI: 10.5519/qd.wnqmc5gn
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.21227/9mkq-bw26
title: Validation of IEEE 802.11 DCF and Optimization of RTS Threshold

description: Distributed coordination function (DCF) is an important technique of medium access control (MAC), utilized by IEEE 802.11 wireless local area networks.
DOI: 10.5519/qd.hbqflbvb
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.21223/km16bh/9smjoc
title: 0.6_SNP_data_rd10_diplodized_maf0.02.hmp.txt

description: :unav
DOI: 10.21223/km16bh/bcggvp
title: 0.4_Kinship_Matrix_rd10_kinshipgeno_diplodized_maf0.02.hmp.txt

description: :unav
DOI: 10.21223/km16bh/dlu9gn
title: 0.2_Phenotypic data.xlt

description: :unav
DOI: 10.21223/km16bh/inxgez
title: 1026712.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/qf0fj5
title: 0.5_Multi_allelic_SNP_data_TF6_rd45_dosage.txt

description: :unav
DOI: 10.21223/km16bh/thnixn
title: 1026714.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/vy0kqa
title: 0.1_Data_Dictionary_CSRFAB.xls

description: :unav
DOI: 10.17632/tm4df6svjr.1
title: Data for: Initial regeneration success of tree species after different forestry treatments in a sessile oak-hornbeam forest

description: Data of regeneration survey in the frame of Pilis Forestry Systems Experiment. The study was carried out in an oakhornbeam forest in Hungary, in 2015-2018. The following variables of the regeneration were measured, after four different forestry treatments (clear-cutting, gap-cutting, preparation cutting, retention tree group) an in uncut control sites: - sessile oak acorn production, - species composition and abundance of natural regeneration in 2x2 m quadrats, - growth of individual planted saplings of five tree species, - growth of individual saplings from the natural regeneration (3 species).
DOI: 10.17632/tm4df6svjr.2
title: Data for: Initial regeneration success of tree species after different forestry treatments in a sessile oak-hornbeam forest
DOI: 10.21223/km16bh/0lbc9k
title: 1026719.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/6npiaz
title: 1026716.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/6tsicm
title: 1026720.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/fgalpa
title: 1026721.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/fizfjw
title: 1026722.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/stzpq3
title: 1026717.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/vjogsy
title: 1026713.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/xmhrl3
title: 1026715.FASTQ.gz

description: :unav
DOI: 10.21227/kb6a-tx15
title: Validation of IEEE 802.11 DCF and Optimization of RTS Threshold

description: Distributed coordination function (DCF) is an important technique of medium access control (MAC), utilized by IEEE 802.11 wireless local area networks.
DOI: 10.17632/c4rzjrwm88.1
title: Super-terminal velocity

description: The 2-dimensional video disdrometer data is analyzed to understand the fall velocity characteristics
DOI: 10.17632/c4rzjrwm88.2
title: Investigation of raindrops fall velocity during different monsoon seasons over the Western Ghats, India

description: The 2-dimensional video disdrometer data is analyzed to understand the fall velocity characteristics
DOI: 10.17632/pngct7c5pd.2
title: From relativistic time dilation to psychological time perception - Scripts

description: Matlab scripts to generate the figures and the results.
DOI: 10.21223/km16bh/1hl9pt
title: 1026704.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/avlwo1
title: 1026729.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/cjnn3w
title: 1026725.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/fogsis
title: 1026730.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/hb4p9c
title: 1026728.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/ifaxpf
title: 1026727.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/l0tibk
title: 1026724.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/lvlle8
title: 1026726.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/n5kszj
title: 1026723.FASTQ.gz

description: :unav
DOI: 10.17632/6gfkz2dwx3.1
title: News Dataset for Creating Human Baseline Experiment

description: This dataset contains 150 news.
DOI: 10.17632/nyzygp93zh.1
title: Open Access, Research Data Management (RDM) and Open Science in Poland 2019

description: Data from a survey on attitudes and perceptions of librarians & researchers about Open Access, Research Data Management (RDM) and Open Science in Poland, collected in Q4 2019. Three files are provided - report on quantitative survey results, all responses in Polish, and all responses translated into English without the replies in open fields. It was collected via an online survey, targeted to approx. 7,500 Polish authors/researchers randomly selected from Scopus database and to approx. 800 librarians from Elsevier contact database. 461 responses in total representing a margin of error of ±4% at 90% confidence levels. This represent a response rate of ±6%. The data collection lasted for 1 week 29th Oct’19 to 5th Nov’ 19 with a survey reminder sent in between. Survey was designed in Polish. Notable findings: Librarians and researchers show a good understanding of Open Access. Nearly half of researchers have experienced publishing in a Gold OA journal. The publishing experience with Gold OA is positive. Value for money and reputation are the only aspects researchers rate Gold OA worse than subscription journals. Cost is the main reason for researchers not to publish in Gold OA journals. Researchers use mainly personal computers/clouds/drives to archive their research data and share it mainly within their project team. One third of libraries would benefit from obtaining more information about RDM in order to be able to support researchers. Most librarians and researchers consider their institution approach to RDM as (very) disorganised. Librarians are more knowledgeable about the concept than Researchers. Most libraries are currently supporting Open Science. Yet, the majority of researchers are not aware of the initiatives/ practices available in their institution. Librarians and researchers agree – Libraries are (very) important in the future of Open Science in Poland.
DOI: 10.21223/km16bh/adbh9g
title: 1026707.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/ftjyug
title: 1026705.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/g1cf7p
title: 1026711.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/qjuqg2
title: 1026708.FASTQ.gz

description: :unav
DOI: 10.21223/km16bh/ti2hjb
title: 1026706.FASTQ.gz

description: :unav