cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/tls-t59-lp0
title: Folinella excavata (R. A. Philippi, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.29149427
title: <i>An Apple a Day Does not Keep the Weevils Away: Enhancing Vine Weevil Monitoring with Fruit-Based Volatiles</i>

description: This study investigated the behavioural and electrophysiological responses of adult vine weevils to apple sauce volatiles under laboratory conditions, using Y-tube olfactometer bioassays and headspace analysis using gas chromatography coupled to mass spectrometry (GC-MS) and GC coupled to electroantennographic detection (GC-EAD). In Y-tube bioassays, more adults selected the olfactometer arm containing apple sauce volatiles compared to the control arm at lower doses (0.1 g, 1 g and 10 g) but not at higher dose (20 g). Thirteen compounds were identified in volatiles collected from apple sauce with the major components being furfural and sorbic acid. Consistent electrophysiological responses were recorded to (<i>E</i>)-2-heptenal, 1-hexanol, (<i>Z</i>)-3-hexenol and (<i>E</i>)-2-hexenol. The behavioural response of vine weevil adults to refuges baited with semiochemical lures was also tested under glasshouse conditions. In this scenario, a greater proportion of individuals were recorded in refuges baited with apple sauce compared to unbaited refuges. A similar behavioural response was also recorded when refuges were baited with a combination of apple sauce and Fortune's spindle (<i>Euonymus fortunei</i> (Turcz.) Hand.-Maz.; Celastrales: Celastraceae) compared to those that were unbaited or individually baited with Fortune’s spindle or apple sauce. This study indicates that apple sauce influences vine weevil behaviour and could serve as a basis for developing a novel lure for improved monitoring.
DOI: 10.3535/kc0-p4s-r1y
title: Oliva Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rej-dg7-0k3
title: Erronea ovum (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5524/102717
title: Chromosome-scale genome assembly of the golden koi carp, <i>Cyprinus carpio 'koi'</i>

description: Here we present the telomere-to-telomere chromosome-level genome assembly for the golden koi carp variant (<i>Cyprinus carpio</i> var. koi) by integration of MGI, PacBio HiFi, ONT, and Hi-C sequencing technologies. The haplotypic genome of the golden koi carps covered 50 chromosomes with 99 telomeres. BUSCO results validated 98.8% completeness. A total of 54,569 protein-coding genes were annotated in the assembled genome. Of these, 97.1% were assigned with functional roles. We also estimate that the golden koi carp genomes contain 636.3 Mb of repetitive sequences, accounting for 40.9% of their whole genome.
DOI: 10.6084/m9.figshare.29149427.v2
title: <i>An Apple a Day Does not Keep the Weevils Away: Enhancing Vine Weevil Monitoring with Fruit-Based Volatiles</i>

description: This study investigated the behavioural and electrophysiological responses of adult vine weevils to apple sauce volatiles under laboratory conditions, using Y-tube olfactometer bioassays and headspace analysis using gas chromatography coupled to mass spectrometry (GC-MS) and GC coupled to electroantennographic detection (GC-EAD). In Y-tube bioassays, more adults selected the olfactometer arm containing apple sauce volatiles compared to the control arm at lower doses (0.1 g, 1 g and 10 g) but not at higher dose (20 g). Thirteen compounds were identified in volatiles collected from apple sauce with the major components being furfural and sorbic acid. Consistent electrophysiological responses were recorded to (<i>E</i>)-2-heptenal, 1-hexanol, (<i>Z</i>)-3-hexenol and (<i>E</i>)-2-hexenol. The behavioural response of vine weevil adults to refuges baited with semiochemical lures was also tested under glasshouse conditions. In this scenario, a greater proportion of individuals were recorded in refuges baited with apple sauce compared to unbaited refuges. A similar behavioural response was also recorded when refuges were baited with a combination of apple sauce and Fortune's spindle (<i>Euonymus fortunei</i> (Turcz.) Hand.-Maz.; Celastrales: Celastraceae) compared to those that were unbaited or individually baited with Fortune’s spindle or apple sauce. This study indicates that apple sauce influences vine weevil behaviour and could serve as a basis for developing a novel lure for improved monitoring.
DOI: 10.15468/dl.ma5vdp
title: Occurrence Download

description: A dataset containing 17799 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Gunnera tinctoria (Molina) Mirb."
 ]
}

 The dataset includes 17799 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010778-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110590666
title: Persepolis Fortification Aramaic Text 235, PFAT 235

description: [Text Description:] Administrative text with seals PFATS 0059; PFATS 0030s ❧ [Text or Publication Number Note:] PFAT 235, Bowman 235 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink and incised inscription. Seal impressions PFATS 0059 on reverse; PFATS 0030s on flat edge.
DOI: 10.25549/jrbm-c91-1660
title: Shōchū rokujō, 1797

description: Shōchū rokujō. Nijōdōri [Kyoto]: Yoshida Shirōuemon, Kansei 9 [1797]. = 掌中六帖. 二条通 [Kyoto]: 吉田四郎右衞門, 寛政9 [1797]. On double leaves, oriental style (fukurotoji).
DOI: 10.25549/inscriptifact-ouc110589328
title: Persepolis Fortification Anepigraphic Tablet 0695.101, PFAnep 0695.101

description: [Text Description:] Administrative Text with seal PFS 0535* ❧ [Text or Publication Number Note:] PFAnep 0695.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression PFS 0535* on bottom edge, left edge, obverse, right edge, reverse, upper edge; ink traces?
DOI: 10.25549/jrbm-c91-1665
title: Shōchū rokujō, 1797

description: Shōchū rokujō. Nijōdōri [Kyoto]: Yoshida Shirōuemon, Kansei 9 [1797]. = 掌中六帖. 二条通 [Kyoto]: 吉田四郎右衞門, 寛政9 [1797]. On double leaves, oriental style (fukurotoji).
DOI: 10.25549/inscriptifact-ouc110589318
title: Persepolis Fortification Anepigraphic Tablet 0695.101, PFAnep 0695.101

description: [Text Description:] Administrative Text with seal PFS 0535* ❧ [Text or Publication Number Note:] PFAnep 0695.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression PFS 0535* on bottom edge, left edge, obverse, right edge, reverse, upper edge; ink traces?
DOI: 10.25549/inscriptifact-ouc110590663
title: Persepolis Fortification Aramaic Text 234, PFAT 234

description: [Text Description:] Administrative text with seal PFATS 0252s ❧ [Text or Publication Number Note:] PFAT 234, Bowman 234 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0252s on upper edge. ❧ [Physical Object Note:] Damage on round edge
DOI: 10.25549/inscriptifact-ouc1sto1607353
title: InscriptiFact -- an image database of inscriptions and artifacts

description: The InscriptiFact Collection is designed to allow access via the Internet to high-resolution images of ancient inscriptions and artifacts, primarily from the Near Eastern and Mediterranean Worlds. The targeted inscriptions constitute some of the world’s earliest written records, which are mostly housed in a number of international museums and libraries, as well as field projects where inscriptions still remain in situ. Included, for example, are, selected Dead Sea Scrolls; cuneiform tablets from Mesopotamia, Persia, Canaan and Egypt; early Jewish papyri from Egypt; lapidary inscriptions, primarily from Jordan, Lebanon and Cyprus; inscriptions on a variety of hard media (e.g., ostraca, copper, semi-precious stones, jar handles) mostly written in early Canaanite, Phoenician, Hebrew, Aramaic, Ammonite and Edomite; and much more. These ancient texts are foundational documents that serve as a point of reference for Judaism, Christianity, Islam and the cultures out of which they emerged. The name "InscriptiFact" is intended to convey the concept of a scholarly archive based on "facts" about "inscriptions" and "artifacts." West Semitic Research Project (WSRP) under the auspices of the University of Southern California (USC) is broadly acknowledged as a leader in the application of photographic and digital technologies to capture and analyze data of ancient texts. The West Semitic Research image archive now contains approximately 1,500,000 images. Important! Search terms with more than one word or number need to be enclosed in quotation marks.Guide to Searching InscriptiFact
DOI: 10.25549/jrbm-c91-1564
title: Shōchū rokujō, 1797

description: Shōchū rokujō. Nijōdōri [Kyoto]: Yoshida Shirōuemon, Kansei 9 [1797]. = 掌中六帖. 二条通 [Kyoto]: 吉田四郎右衞門, 寛政9 [1797]. On double leaves, oriental style (fukurotoji).
DOI: 10.25549/inscriptifact-ouc110589304
title: Persepolis Fortification Anepigraphic Tablet 0694.101, PFAnep 0694.101

description: [Text Description:] Administrative Text with seals PFUTS 0089s, PFUTS 0102s, PFUTS 0097s ❧ [Text or Publication Number Note:] PFAnep 0694.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression PFUTS 0089s on obverse, PFUTS 0102s on reverse, PFUTS 0097s on left edge
DOI: 10.25549/inscriptifact-ouc110590649
title: Persepolis Fortification Aramaic Text 234, PFAT 234

description: [Text Description:] Administrative text with seal PFATS 0252s ❧ [Text or Publication Number Note:] PFAT 234, Bowman 234 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0252s on upper edge. ❧ [Physical Object Note:] Damage on round edge
DOI: 10.25549/jrbm-c91-1645
title: Shōchū rokujō, 1797

description: Shōchū rokujō. Nijōdōri [Kyoto]: Yoshida Shirōuemon, Kansei 9 [1797]. = 掌中六帖. 二条通 [Kyoto]: 吉田四郎右衞門, 寛政9 [1797]. On double leaves, oriental style (fukurotoji).
DOI: 10.25549/inscriptifact-ouc110589299
title: Persepolis Fortification Anepigraphic Tablet 0695.101, PFAnep 0695.101

description: [Text Description:] Administrative Text with seal PFS 0535* ❧ [Text or Publication Number Note:] PFAnep 0695.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression PFS 0535* on bottom edge, left edge, obverse, right edge, reverse, upper edge; ink traces?
DOI: 10.25549/jrbm-c91-1661
title: Shōchū rokujō, 1797

description: Shōchū rokujō. Nijōdōri [Kyoto]: Yoshida Shirōuemon, Kansei 9 [1797]. = 掌中六帖. 二条通 [Kyoto]: 吉田四郎右衞門, 寛政9 [1797]. On double leaves, oriental style (fukurotoji).
DOI: 10.25549/inscriptifact-ouc1sto1607425
title: InscriptiFact -- an image database of inscriptions and artifacts

description: The InscriptiFact Collection is designed to allow access via the Internet to high-resolution images of ancient inscriptions and artifacts, primarily from the Near Eastern and Mediterranean Worlds. The targeted inscriptions constitute some of the world’s earliest written records, which are mostly housed in a number of international museums and libraries, as well as field projects where inscriptions still remain in situ. Included, for example, are, selected Dead Sea Scrolls; cuneiform tablets from Mesopotamia, Persia, Canaan and Egypt; early Jewish papyri from Egypt; lapidary inscriptions, primarily from Jordan, Lebanon and Cyprus; inscriptions on a variety of hard media (e.g., ostraca, copper, semi-precious stones, jar handles) mostly written in early Canaanite, Phoenician, Hebrew, Aramaic, Ammonite and Edomite; and much more. These ancient texts are foundational documents that serve as a point of reference for Judaism, Christianity, Islam and the cultures out of which they emerged. The name "InscriptiFact" is intended to convey the concept of a scholarly archive based on "facts" about "inscriptions" and "artifacts." West Semitic Research Project (WSRP) under the auspices of the University of Southern California (USC) is broadly acknowledged as a leader in the application of photographic and digital technologies to capture and analyze data of ancient texts. The West Semitic Research image archive now contains approximately 1,500,000 images. Important! Search terms with more than one word or number need to be enclosed in quotation marks.Guide to Searching InscriptiFact
DOI: 10.25345/c56t0h89s
title: MassIVE MSV000099858 - GNPS-Test-Curso_Metabolomica_Apenas_teste
title: Aula teste do Curso de Metabolomica, dados de frutos coletados na estrada do mauazinho, sitio pank.
DOI: 10.25549/inscriptifact-ouc110593454
title: Persepolis Fortification Elamite Text 0217, PF 0217

description: [Text Description:] Administrative text with seals PFS 0046; PFS 0484. Aramaic gloss. ❧ [Text or Publication Number Note:] PF 0217 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform, Aramaic ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impressions PFS 0046 on reverse; PFS 0484 on left edge. Aramaic gloss in ink, upper edge (one line), reverse (one line).
DOI: 10.25549/jrbm-c91-1644
title: Shōchū rokujō, 1797

description: Shōchū rokujō. Nijōdōri [Kyoto]: Yoshida Shirōuemon, Kansei 9 [1797]. = 掌中六帖. 二条通 [Kyoto]: 吉田四郎右衞門, 寛政9 [1797]. On double leaves, oriental style (fukurotoji).
DOI: 10.25345/c5bk1733j
title: MassIVE MSV000099857 - gnps-metabolomica-aulatestecurso
title: aula teste com amostra de cacau do Silvio, aluno do professor Dr. Hector Koolen
DOI: 10.25549/inscriptifact-ouc110591842
title: Persepolis Fortification Aramaic Text 263, PFAT 263

description: [Text Description:] Administrative text with seals PFATS 0004s; PFATS 0275s; PFATS 0033; PFS 0578s ❧ [Text or Publication Number Note:] PFAT 263, Bowman 263 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impressions PFATS 0004s on upper edge; PFATS 0275s on reverse; PFATS 0033 on bottom edge; PFS 0578s on flat edge. ❧ [Physical Object Note:] Damage on round edge
DOI: 10.25549/inscriptifact-ouc110593451
title: Persepolis Fortification Elamite Text 0217, PF 0217

description: [Text Description:] Administrative text with seals PFS 0046; PFS 0484. Aramaic gloss. ❧ [Text or Publication Number Note:] PF 0217 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform, Aramaic ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impressions PFS 0046 on reverse; PFS 0484 on left edge. Aramaic gloss in ink, upper edge (one line), reverse (one line).
DOI: 10.25549/jrbm-c91-1664
title: Shōchū rokujō, 1797

description: Shōchū rokujō. Nijōdōri [Kyoto]: Yoshida Shirōuemon, Kansei 9 [1797]. = 掌中六帖. 二条通 [Kyoto]: 吉田四郎右衞門, 寛政9 [1797]. On double leaves, oriental style (fukurotoji).
DOI: 10.5281/zenodo.15359897
title: dendrocygna_arcuata_zanfona_1.fasta.gz
DOI: 10.5281/zenodo.15359898
title: dendrocygna_arcuata_zanfona_1.fasta.gz
DOI: 10.5066/p9ntgm51
title: Historical simulated snowpack for the Willow Creek and Big Thompson, Colorado watersheds and vicinity, water years 1994-2023

description: This data release contains historical SnowModel outputs for the Willow Creek and Big Thompson, CO watersheds and surrounding area. Simulated outputs were produced on a 30 meter (m) geospatial grid and forced using meteorology from the National Land Data Assimilation System (NLDAS-2). These simulations used daily snow water equivalent (SWE) time-series from 13 National Resources Conservation Service snowpack telemetry (SNOTEL) sites to condition the SnowModel to observed snowpack. Land cover information for the simulation was provided by the 2016 National Land Cover Database and 30 m elevation information was provided by the National Elevation Dataset.
DOI: 10.15468/dl.t5x22s
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-74.75141 -17.90947,-69.76677 -17.90947,-69.76677 -13.69087,-74.75141 -13.69087,-74.75141 -17.90947))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Psittacara frontatus (Cabanis, 1846)",
 "Year 2021-2025"
 ]
}

 The dataset includes 35 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020080-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v6xk2p
title: Occurrence Download

description: A dataset containing 8674 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-119.79261 31.82648,-107.33348 14.85039,-95.39287 13.74254,-94.24495 16.7718,-113.38445 32.00851,-119.4799 33.9245,-119.79261 31.82648))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Scleractinia"
 ]
}

 The dataset includes 8674 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020079-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14212758
title: J18119_mass_cytometry

description: This record contains mcd files, fcs files, output rds object and scripts for J18119 IMC analysis.

list of the scripts:

phenograph_J18119_partI_clustering_final.R

phenograph_J18119_partII_abundances_final.R

phenograph_J18119_partIII_spatial_final.R
DOI: 10.5281/zenodo.14212759
title: J18119_mass_cytometry

description: This record contains mcd files, fcs files, output rds object and scripts for J18119 IMC analysis.

list of the scripts:

phenograph_J18119_partI_clustering_final.R

phenograph_J18119_partII_abundances_final.R

phenograph_J18119_partIII_spatial_final.R
DOI: 10.7274/28756655
title: Span-Based Information Extraction and Beyond

description: Span-based information extraction (SIE) is a set of natural language processing and information extraction tasks which aim to extract the span of interest from digital text and assign corresponding span classes that describe the nature of that text. SIE is essential yet challenging. On one hand, the development of SIE directly reflects natural language processing especially on text understanding. On the other hand, SIE can link digital text to knowledge base and knowledge graph entries, which can enhance the background information of the highlighted text.

In this thesis, I focus on SIE tasks with four parts. (1) Foundations of Span-based Information Extraction. This section outlines the concepts and history of this task.
(2) Models of Span-based Information Extraction. This section introduces our presented three SIE models including Ask-and-Verify, EntGPT, and G3. (3) Applications of Span-based Information Extraction. This section introduces two applications of SIE including SIE for multi-choice question answering and SIE to enhance trust of plain text. (4) Limitations and Future Work Beyond Span-based Information Extraction. This section covers limitations of SIE and some directions for future work.
DOI: 10.7274/28756655.v1
title: Span-Based Information Extraction and Beyond

description: Span-based information extraction (SIE) is a set of natural language processing and information extraction tasks which aim to extract the span of interest from digital text and assign corresponding span classes that describe the nature of that text. SIE is essential yet challenging. On one hand, the development of SIE directly reflects natural language processing especially on text understanding. On the other hand, SIE can link digital text to knowledge base and knowledge graph entries, which can enhance the background information of the highlighted text.

In this thesis, I focus on SIE tasks with four parts. (1) Foundations of Span-based Information Extraction. This section outlines the concepts and history of this task.
(2) Models of Span-based Information Extraction. This section introduces our presented three SIE models including Ask-and-Verify, EntGPT, and G3. (3) Applications of Span-based Information Extraction. This section introduces two applications of SIE including SIE for multi-choice question answering and SIE to enhance trust of plain text. (4) Limitations and Future Work Beyond Span-based Information Extraction. This section covers limitations of SIE and some directions for future work.