cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3513563.v1
title: Full Archive

description: Full Archive
DOI: 10.6084/m9.figshare.3513560
title: Appendix A. Color-coded version of Fig. 1 showing the tillage system groups.

description: Color-coded version of Fig. 1 showing the tillage system groups.
DOI: 10.6084/m9.figshare.3513557
title: Appendix A. A figure showing the change in probability distribution of spawning site quality with forecasted land-use change in the study watersheds.

description: A figure showing the change in probability distribution of spawning site quality with forecasted land-use change in the study watersheds.
DOI: 10.6084/m9.figshare.3513557.v1
title: Appendix A. A figure showing the change in probability distribution of spawning site quality with forecasted land-use change in the study watersheds.

description: A figure showing the change in probability distribution of spawning site quality with forecasted land-use change in the study watersheds.
DOI: 10.6084/m9.figshare.3513554
title: Supplement 1. Plot descriptions and calculation of canopy N from foliar N data.

description: File List FolNdata.txt Description The file FolNdata.txt contains the full data set used in the source paper. This data set is inclusive of all independent variables, foliar N data, and species composition measurements collected at each of 75 plot locations in the Adirondack Park. The combination of the foliar N data and the relative species abundance data are used to make the canopy N measurement at each plot. The user should note the following. (1) Documented forest disturbance events are coded as: 1, selective logging prior to 1916<br> 2, clearcut logging prior to 1916<br> 3, clearcut logging and fire prior to 1916<br> 4, moderate (25–50%) canopy loss in a 1950 blowdown event<br> 5, severe (50–100%) canopy loss in a 1950 blowdown event<br> 6, moderate (30–60%) canopy loss in a 1995 blowdown event<br> 7, moderate or intenseley damaged (10-64% canopy loss) in a 1998 ice storm event (2) A look-up table for description of the bedrock types is available at www.nysm.nysed.gov/data/bedrock.txt (3) Species abbreviations follow the convention of USDA species code (http://plants.usda.gov) and generally are the first two letters of the genus and first two letters of the species. (4) Canopy N values for two plots with "no data" for Soam represent the weighted average from all other species in the plot. Soam (Mountain-ash) leaf samples collected in these two plots were lost during sample processing.
DOI: 10.6084/m9.figshare.3513554.v1
title: Supplement 1. Plot descriptions and calculation of canopy N from foliar N data.

description: File List FolNdata.txt Description The file FolNdata.txt contains the full data set used in the source paper. This data set is inclusive of all independent variables, foliar N data, and species composition measurements collected at each of 75 plot locations in the Adirondack Park. The combination of the foliar N data and the relative species abundance data are used to make the canopy N measurement at each plot. The user should note the following. (1) Documented forest disturbance events are coded as: 1, selective logging prior to 1916<br> 2, clearcut logging prior to 1916<br> 3, clearcut logging and fire prior to 1916<br> 4, moderate (25–50%) canopy loss in a 1950 blowdown event<br> 5, severe (50–100%) canopy loss in a 1950 blowdown event<br> 6, moderate (30–60%) canopy loss in a 1995 blowdown event<br> 7, moderate or intenseley damaged (10-64% canopy loss) in a 1998 ice storm event (2) A look-up table for description of the bedrock types is available at www.nysm.nysed.gov/data/bedrock.txt (3) Species abbreviations follow the convention of USDA species code (http://plants.usda.gov) and generally are the first two letters of the genus and first two letters of the species. (4) Canopy N values for two plots with "no data" for Soam represent the weighted average from all other species in the plot. Soam (Mountain-ash) leaf samples collected in these two plots were lost during sample processing.
DOI: 10.6084/m9.figshare.3513551
title: Appendix A. A map showing the ECHAM4 and CGCM3 domains.

description: A map showing the ECHAM4 and CGCM3 domains.
DOI: 10.6084/m9.figshare.3513551.v1
title: Appendix A. A map showing the ECHAM4 and CGCM3 domains.

description: A map showing the ECHAM4 and CGCM3 domains.
DOI: 10.6084/m9.figshare.3513548
title: Appendix B. Drought Code records covering 1768–2100.

description: Drought Code records covering 1768–2100.
DOI: 10.6084/m9.figshare.3513548.v1
title: Appendix B. Drought Code records covering 1768–2100.

description: Drought Code records covering 1768–2100.
DOI: 10.6084/m9.figshare.3513545
title: Appendix C. Description of the reduction of error and product means tests.

description: Description of the reduction of error and product means tests.
DOI: 10.6084/m9.figshare.3513542
title: Appendix D. Sensitivity analyses of Eq. 1 to input variables.

description: Sensitivity analyses of Eq. 1 to input variables.
DOI: 10.6084/m9.figshare.3513542.v1
title: Appendix D. Sensitivity analyses of Eq. 1 to input variables.

description: Sensitivity analyses of Eq. 1 to input variables.
DOI: 10.6084/m9.figshare.3513539
title: Appendix E. Fire occurrence estimates obtained from CGCM3 simulations.

description: Fire occurrence estimates obtained from CGCM3 simulations.
DOI: 10.6084/m9.figshare.3513539.v1
title: Appendix E. Fire occurrence estimates obtained from CGCM3 simulations.

description: Fire occurrence estimates obtained from CGCM3 simulations.
DOI: 10.6084/m9.figshare.3513536
title: Supplement 1. Files containing the reconstructions of the July monthly averages of the daily Drought Code covering the period 1768 to 1998, the CGCM3 and ECHAM4 simulations, the FireOcc data (observations and estimates), and the RAMPFIT software.

description: File List Data.zip -- zip file containing drought and fire data rampfit-esa.zip -- zip file containing the RAMPFIT software, Version 1.10 (November 2007) Data_and_RAMPFIT.zip -- All files at once see Download page for individual files. Description The files include the data used by Girardin and Mudelsee (2007) for calibrating the FireOcc model (LFDB_FireOcc.txt) and predicting past (DroughtReconstructions.txt) and future (ECHAM4-CGCM3_simulations.txt) changes in FireOcc. The generated FireOcc estimates are found in the file FireOcc_estimates.txt. Estimates of occurrence rates of extreme fire years are presented in the file XTREND_output.txt. RAMPFIT is a software program for estimating change-points in a time series. RAMPFIT has been used by Girardin and Mudelsee (2007) to detect changes in the FireOcc time series. The provided executable (rampfit.exe) runs under Windows operating systems. In addition to RAMPFIT, the freeware Gnuplot viewer has to be installed to visualize results. Further information: (1) readme.txt file included in the software file contains hints for installation; (2) Mudelsee (2000) paper contains the mathematics and also a short manual; (3) rampfit.for source code included in the software file has details on numerical implementation. See http://www.mudelsee.com for free program downloads and updates.
DOI: 10.6084/m9.figshare.3513536.v1
title: Supplement 1. Files containing the reconstructions of the July monthly averages of the daily Drought Code covering the period 1768 to 1998, the CGCM3 and ECHAM4 simulations, the FireOcc data (observations and estimates), and the RAMPFIT software.

description: File List Data.zip -- zip file containing drought and fire data rampfit-esa.zip -- zip file containing the RAMPFIT software, Version 1.10 (November 2007) Data_and_RAMPFIT.zip -- All files at once see Download page for individual files. Description The files include the data used by Girardin and Mudelsee (2007) for calibrating the FireOcc model (LFDB_FireOcc.txt) and predicting past (DroughtReconstructions.txt) and future (ECHAM4-CGCM3_simulations.txt) changes in FireOcc. The generated FireOcc estimates are found in the file FireOcc_estimates.txt. Estimates of occurrence rates of extreme fire years are presented in the file XTREND_output.txt. RAMPFIT is a software program for estimating change-points in a time series. RAMPFIT has been used by Girardin and Mudelsee (2007) to detect changes in the FireOcc time series. The provided executable (rampfit.exe) runs under Windows operating systems. In addition to RAMPFIT, the freeware Gnuplot viewer has to be installed to visualize results. Further information: (1) readme.txt file included in the software file contains hints for installation; (2) Mudelsee (2000) paper contains the mathematics and also a short manual; (3) rampfit.for source code included in the software file has details on numerical implementation. See http://www.mudelsee.com for free program downloads and updates.
DOI: 10.6084/m9.figshare.3513533
title: Appendix A. Methodological details.

description: Methodological details.
DOI: 10.6084/m9.figshare.3513533.v1
title: Appendix A. Methodological details.

description: Methodological details.
DOI: 10.6084/m9.figshare.3513530
title: Appendix B. Assessment of the relationship between hemlock crown health and understory light availability.

description: Assessment of the relationship between hemlock crown health and understory light availability.
DOI: 10.6084/m9.figshare.3513530.v1
title: Appendix B. Assessment of the relationship between hemlock crown health and understory light availability.

description: Assessment of the relationship between hemlock crown health and understory light availability.
DOI: 10.6084/m9.figshare.3513527
title: Appendix A. Matrix models for invasive and noninvasive congeners that were parameterized with germination experiments in a growth chamber.

description: Matrix models for invasive and noninvasive congeners that were parameterized with germination experiments in a growth chamber.
DOI: 10.6084/m9.figshare.3513527.v1
title: Appendix A. Matrix models for invasive and noninvasive congeners that were parameterized with germination experiments in a growth chamber.

description: Matrix models for invasive and noninvasive congeners that were parameterized with germination experiments in a growth chamber.
DOI: 10.6084/m9.figshare.3513524
title: Appendix B. Matrices for models of the demography of invasive and noninvasive Commelinaceae.

description: Matrices for models of the demography of invasive and noninvasive Commelinaceae.
DOI: 10.6084/m9.figshare.3513524.v1
title: Appendix B. Matrices for models of the demography of invasive and noninvasive Commelinaceae.

description: Matrices for models of the demography of invasive and noninvasive Commelinaceae.
DOI: 10.6084/m9.figshare.3513521
title: Appendix C. Elasticities for sexual reproduction for invasive and noninvasive Commelinaceae.

description: Elasticities for sexual reproduction for invasive and noninvasive Commelinaceae.
DOI: 10.6084/m9.figshare.3513521.v1
title: Appendix C. Elasticities for sexual reproduction for invasive and noninvasive Commelinaceae.

description: Elasticities for sexual reproduction for invasive and noninvasive Commelinaceae.
DOI: 10.6084/m9.figshare.3513518
title: Appendix D. Figures for the life table response experiment analysis effect sizes for invasive and noninvasive Commelinaceae.

description: Figures for the life table response experiment analysis effect sizes for invasive and noninvasive Commelinaceae.
DOI: 10.6084/m9.figshare.3513518.v1
title: Appendix D. Figures for the life table response experiment analysis effect sizes for invasive and noninvasive Commelinaceae.

description: Figures for the life table response experiment analysis effect sizes for invasive and noninvasive Commelinaceae.
DOI: 10.6084/m9.figshare.3513515
title: Appendix A. Quantifying spatial patterns in community characteristics and estimating latitudinal and depth gradients in catch per unit effort (CPUE) and probability of occurrence using generalized additive models.

description: Quantifying spatial patterns in community characteristics and estimating latitudinal and depth gradients in catch per unit effort (CPUE) and probability of occurrence using generalized additive models.
DOI: 10.6084/m9.figshare.3513512
title: Appendix B. Evaluating climate effects on distribution of individual taxa.

description: Evaluating climate effects on distribution of individual taxa.
DOI: 10.6084/m9.figshare.3513509
title: Supplement 1. WinBUGS code, and sample data and initial values, for stage-2 state–space model analysis of movement paths.

description: File List CodeSupplement_model.txt -- WinBUGS code CodeSupplement_data and inits.txt -- sample data and initial values Description “CodeSupplement_model.txt” contains WinBUGS code for running the stage-2 state-space model <i>in</i>: S. Eckert, J. Moore, D. Dunn, R. Sagarminaga, K. Eckert, P. Halpin "Hierarchical state-space models of loggerhead sea turtle (<i>Caretta</i> <i>caretta</i>) movement in relation to turtle size and oceanographic features in the western Mediterranean Sea". Code includes prior specification for all estimated parameters and hyper-parameters (stochastic nodes), including parameters describing covariate effects on behavioral switch probabilities and parameters describing movement characteristics (rates and variance of turn angles) for two behavioral states. Code includes normal and wrapped Cauchy likelihoods for mode-specific movement parameters and a Bernoulli likelihood for behavioral state. Model is based on a hierarchical switch model <i>from</i>: J. Morales, D. Haydon, J. Frair, K. Holsinger, and J. Fryxell. Extracting more out of reloction data: building movement models as mixtures of random walks. Ecology 85:2436–2445. “CodeSupplement_data and inits.txt” contains sample data and initial values in WinBUGS format. All data were standardized as <i>z</i>-scores for analysis.
DOI: 10.6084/m9.figshare.3513509.v1
title: Supplement 1. WinBUGS code, and sample data and initial values, for stage-2 state–space model analysis of movement paths.

description: File List CodeSupplement_model.txt -- WinBUGS code CodeSupplement_data and inits.txt -- sample data and initial values Description “CodeSupplement_model.txt” contains WinBUGS code for running the stage-2 state-space model <i>in</i>: S. Eckert, J. Moore, D. Dunn, R. Sagarminaga, K. Eckert, P. Halpin "Hierarchical state-space models of loggerhead sea turtle (<i>Caretta</i> <i>caretta</i>) movement in relation to turtle size and oceanographic features in the western Mediterranean Sea". Code includes prior specification for all estimated parameters and hyper-parameters (stochastic nodes), including parameters describing covariate effects on behavioral switch probabilities and parameters describing movement characteristics (rates and variance of turn angles) for two behavioral states. Code includes normal and wrapped Cauchy likelihoods for mode-specific movement parameters and a Bernoulli likelihood for behavioral state. Model is based on a hierarchical switch model <i>from</i>: J. Morales, D. Haydon, J. Frair, K. Holsinger, and J. Fryxell. Extracting more out of reloction data: building movement models as mixtures of random walks. Ecology 85:2436–2445. “CodeSupplement_data and inits.txt” contains sample data and initial values in WinBUGS format. All data were standardized as <i>z</i>-scores for analysis.
DOI: 10.6084/m9.figshare.3513506
title: Appendix A. Taxonomic breakdown, decay times, wood durability, and local names of trees used for orangutan nesting in the Lesan Protected Area.

description: Taxonomic breakdown, decay times, wood durability, and local names of trees used for orangutan nesting in the Lesan Protected Area.
DOI: 10.6084/m9.figshare.3513506.v1
title: Appendix A. Taxonomic breakdown, decay times, wood durability, and local names of trees used for orangutan nesting in the Lesan Protected Area.

description: Taxonomic breakdown, decay times, wood durability, and local names of trees used for orangutan nesting in the Lesan Protected Area.
DOI: 10.6084/m9.figshare.3513503
title: Appendix A. Classification of 106 bird species recorded in study mosaics, in terms of their habitat-association group, and the number of mosaics in which they were recorded.

description: Classification of 106 bird species recorded in study mosaics, in terms of their habitat-association group, and the number of mosaics in which they were recorded.
DOI: 10.6084/m9.figshare.3513503.v1
title: Appendix A. Classification of 106 bird species recorded in study mosaics, in terms of their habitat-association group, and the number of mosaics in which they were recorded.

description: Classification of 106 bird species recorded in study mosaics, in terms of their habitat-association group, and the number of mosaics in which they were recorded.
DOI: 10.6084/m9.figshare.3513500
title: Appendix A. A table showing the standardized abundance of Coleopteran families encountered at six sites in the Cascades Forest District of British Columbia in 2005.

description: A table showing the standardized abundance of Coleopteran families encountered at six sites in the Cascades Forest District of British Columbia in 2005.
DOI: 10.6084/m9.figshare.3513500.v1
title: Appendix A. A table showing the standardized abundance of Coleopteran families encountered at six sites in the Cascades Forest District of British Columbia in 2005.

description: A table showing the standardized abundance of Coleopteran families encountered at six sites in the Cascades Forest District of British Columbia in 2005.
DOI: 10.6084/m9.figshare.3513497
title: Appendix B. A table showing the standardized abundance of Scolytidae species encountered at six sites in the Cascades Forest District of British Columbia in 2005.

description: A table showing the standardized abundance of Scolytidae species encountered at six sites in the Cascades Forest District of British Columbia in 2005.
DOI: 10.6084/m9.figshare.3513497.v1
title: Appendix B. A table showing the standardized abundance of Scolytidae species encountered at six sites in the Cascades Forest District of British Columbia in 2005.

description: A table showing the standardized abundance of Scolytidae species encountered at six sites in the Cascades Forest District of British Columbia in 2005.
DOI: 10.6084/m9.figshare.3513494
title: Appendix C. Mean tree type densities assessed in monosodium methanearsonate (MSMA) and reference stands containing insect flight traps in the Cascades Forest District in British Columbia, Canada.

description: Mean tree type densities assessed in monosodium methanearsonate (MSMA) and reference stands containing insect flight traps in the Cascades Forest District in British Columbia, Canada.
DOI: 10.6084/m9.figshare.3513494.v1
title: Appendix C. Mean tree type densities assessed in monosodium methanearsonate (MSMA) and reference stands containing insect flight traps in the Cascades Forest District in British Columbia, Canada.

description: Mean tree type densities assessed in monosodium methanearsonate (MSMA) and reference stands containing insect flight traps in the Cascades Forest District in British Columbia, Canada.
DOI: 10.6084/m9.figshare.3513491
title: Appendix A. Three tables listing Δ14C values and corresponding estimated turnover times of litter, light, and heavy SOM fractions.

description: Three tables listing Δ14C values and corresponding estimated turnover times of litter, light, and heavy SOM fractions.
DOI: 10.6084/m9.figshare.3513488
title: Appendix B. A table listing the pH values and estimated clay contents of the sites' soil layers.

description: A table listing the pH values and estimated clay contents of the sites' soil layers.
DOI: 10.6084/m9.figshare.3513485
title: Appendix C. A table listing the estimated relative soil water content of the sites in summer.

description: A table listing the estimated relative soil water content of the sites in summer.
DOI: 10.6084/m9.figshare.3513482
title: Appendix A. A table of regression parameters for equations used in calculating browsing intensity in Yellowstone National Park, USA.

description: A table of regression parameters for equations used in calculating browsing intensity in Yellowstone National Park, USA.
DOI: 10.6084/m9.figshare.3513482.v1
title: Appendix A. A table of regression parameters for equations used in calculating browsing intensity in Yellowstone National Park, USA.

description: A table of regression parameters for equations used in calculating browsing intensity in Yellowstone National Park, USA.
DOI: 10.6084/m9.figshare.3513479
title: Appendix A. Details of model building and model selection steps for predicting wetland conversion.

description: Details of model building and model selection steps for predicting wetland conversion.
DOI: 10.6084/m9.figshare.3513479.v1
title: Appendix A. Details of model building and model selection steps for predicting wetland conversion.

description: Details of model building and model selection steps for predicting wetland conversion.
DOI: 10.6084/m9.figshare.3513476
title: Appendix A. A figure showing sampling errors at the 67% confidence limit reported for timberland area and timberland volume, and a figure showing forest area by county in the western United States.

description: A figure showing sampling errors at the 67% confidence limit reported for timberland area and timberland volume, and a figure showing forest area by county in the western United States.
DOI: 10.6084/m9.figshare.3513476.v1
title: Appendix A. A figure showing sampling errors at the 67% confidence limit reported for timberland area and timberland volume, and a figure showing forest area by county in the western United States.

description: A figure showing sampling errors at the 67% confidence limit reported for timberland area and timberland volume, and a figure showing forest area by county in the western United States.
DOI: 10.6084/m9.figshare.3513473
title: Appendix A. Nitrate concentration and stable isotope data for rivers sampled during 2005.

description: Nitrate concentration and stable isotope data for rivers sampled during 2005.
DOI: 10.6084/m9.figshare.3513473.v1
title: Appendix A. Nitrate concentration and stable isotope data for rivers sampled during 2005.

description: Nitrate concentration and stable isotope data for rivers sampled during 2005.
DOI: 10.6084/m9.figshare.3513470
title: Appendix A. Major physical-chemistry constituents of ponds for each treatment at initial condition and after Roundup addition.

description: Major physical-chemistry constituents of ponds for each treatment at initial condition and after Roundup addition.
DOI: 10.6084/m9.figshare.3513470.v1
title: Appendix A. Major physical-chemistry constituents of ponds for each treatment at initial condition and after Roundup addition.

description: Major physical-chemistry constituents of ponds for each treatment at initial condition and after Roundup addition.
DOI: 10.6084/m9.figshare.3513467
title: Appendix A. A table of equations used for biomass calculations.

description: A table of equations used for biomass calculations.
DOI: 10.6084/m9.figshare.3513467.v1
title: Appendix A. A table of equations used for biomass calculations.

description: A table of equations used for biomass calculations.
DOI: 10.6084/m9.figshare.3513464
title: Appendix B. A table of equations and data used for fecundity calculations.

description: A table of equations and data used for fecundity calculations.
DOI: 10.6084/m9.figshare.3513464.v1
title: Appendix B. A table of equations and data used for fecundity calculations.

description: A table of equations and data used for fecundity calculations.
DOI: 10.6084/m9.figshare.3513461
title: Appendix C. Fish population parameters, all species.

description: Fish population parameters, all species.
DOI: 10.6084/m9.figshare.3513461.v1
title: Appendix C. Fish population parameters, all species.

description: Fish population parameters, all species.
DOI: 10.6084/m9.figshare.3513458
title: Appendix D. Multivariate analyses of density.

description: Multivariate analyses of density.
DOI: 10.6084/m9.figshare.3513458.v1
title: Appendix D. Multivariate analyses of density.

description: Multivariate analyses of density.