cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20175854
title: Additional file 1 of Co-existence of overweight/obesity and stunting: it’s prevalence and associated factors among under - five children in Addis Ababa, Ethiopia

description: Additional file 1.
DOI: 10.6084/m9.figshare.20175854.v1
title: Additional file 1 of Co-existence of overweight/obesity and stunting: it’s prevalence and associated factors among under - five children in Addis Ababa, Ethiopia

description: Additional file 1.
DOI: 10.6084/m9.figshare.20175869.v1
title: Additional file 4 of Microbial Tracking-2, a metagenomics analysis of bacteria and fungi onboard the International Space Station

description: Additional file 4: Dataset S2. The percent completion, contamination, GC content, taxonomy, N50 (a measure of assembly quality) and genome size.
DOI: 10.6084/m9.figshare.20175866
title: Additional file 3 of Microbial Tracking-2, a metagenomics analysis of bacteria and fungi onboard the International Space Station

description: Additional file 3: Dataset S1. Read counts by Kingdom.
DOI: 10.6084/m9.figshare.20175869
title: Additional file 4 of Microbial Tracking-2, a metagenomics analysis of bacteria and fungi onboard the International Space Station

description: Additional file 4: Dataset S2. The percent completion, contamination, GC content, taxonomy, N50 (a measure of assembly quality) and genome size.
DOI: 10.6084/m9.figshare.20175872
title: Additional file 5 of Microbial Tracking-2, a metagenomics analysis of bacteria and fungi onboard the International Space Station

description: Additional file 5: Dataset S3. Complete list of each COG ID.
DOI: 10.6084/m9.figshare.20175875
title: Additional file 6 of Microbial Tracking-2, a metagenomics analysis of bacteria and fungi onboard the International Space Station

description: Additional file 6: Dataset S4. Read counts of detected species in each sample and control. Only those species with over 100 read counts across all samples/controls were included. “F” referes to flight group, xS referes to location. “P” refers to PMA treatment, “CTL” refers to control wipe fliown to ISS.
DOI: 10.6084/m9.figshare.20175866.v1
title: Additional file 3 of Microbial Tracking-2, a metagenomics analysis of bacteria and fungi onboard the International Space Station

description: Additional file 3: Dataset S1. Read counts by Kingdom.
DOI: 10.6084/m9.figshare.20175872.v1
title: Additional file 5 of Microbial Tracking-2, a metagenomics analysis of bacteria and fungi onboard the International Space Station

description: Additional file 5: Dataset S3. Complete list of each COG ID.
DOI: 10.6084/m9.figshare.20175875.v1
title: Additional file 6 of Microbial Tracking-2, a metagenomics analysis of bacteria and fungi onboard the International Space Station

description: Additional file 6: Dataset S4. Read counts of detected species in each sample and control. Only those species with over 100 read counts across all samples/controls were included. “F” referes to flight group, xS referes to location. “P” refers to PMA treatment, “CTL” refers to control wipe fliown to ISS.
DOI: 10.6084/m9.figshare.20175916.v1
title: Additional file 1 of Use of algorithms for identifying patients in a German claims database: learnings from a lung cancer case

description: Additional file 1.
DOI: 10.6084/m9.figshare.20175916
title: Additional file 1 of Use of algorithms for identifying patients in a German claims database: learnings from a lung cancer case

description: Additional file 1.
DOI: 10.6084/m9.figshare.20175919
title: Additional file 1 of Extracranial carotid plaque hemorrhage predicts ipsilateral stroke recurrence in patients with carotid atherosclerosis – a study based on high-resolution vessel wall imaging MRI

description: Additional file 1.
DOI: 10.6084/m9.figshare.20175919.v1
title: Additional file 1 of Extracranial carotid plaque hemorrhage predicts ipsilateral stroke recurrence in patients with carotid atherosclerosis – a study based on high-resolution vessel wall imaging MRI

description: Additional file 1.
DOI: 10.6084/m9.figshare.20175941
title: Additional file 1 of Phylogeographic dynamics of the arthropod vector, the blacklegged tick (Ixodes scapularis)

description: Additional file 1.: Table S1. Sample metadata. For each tick, this includes year collected, sex, and collection site information.
DOI: 10.6084/m9.figshare.20175941.v1
title: Additional file 1 of Phylogeographic dynamics of the arthropod vector, the blacklegged tick (Ixodes scapularis)

description: Additional file 1.: Table S1. Sample metadata. For each tick, this includes year collected, sex, and collection site information.
DOI: 10.6084/m9.figshare.20175944
title: Additional file 2 of Phylogeographic dynamics of the arthropod vector, the blacklegged tick (Ixodes scapularis)

description: Additional file 2.: Table S2. Long-range PCR primer sequences.
DOI: 10.6084/m9.figshare.20175944.v1
title: Additional file 2 of Phylogeographic dynamics of the arthropod vector, the blacklegged tick (Ixodes scapularis)

description: Additional file 2.: Table S2. Long-range PCR primer sequences.
DOI: 10.6084/m9.figshare.20175971
title: Additional file 1 of The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery

description: Additional file 1:The Semanticscience Integrated Ontology, v1.0. This file in the format of OWL2, the Web Ontology Language. (ZIP 98 KB)
DOI: 10.6084/m9.figshare.20175971.v1
title: Additional file 1 of The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery

description: Additional file 1:The Semanticscience Integrated Ontology, v1.0. This file in the format of OWL2, the Web Ontology Language. (ZIP 98 KB)
DOI: 10.6084/m9.figshare.20176036
title: Additional file 1 of Gut microbiome of century-old snail specimens stable across time in preservation

description: Additional file 1: Supplementary Table 1. Chalifour, Elder, & Li 2021—Gut microbiome of century-old snail specimens stable across time in preservation.
DOI: 10.6084/m9.figshare.20176036.v1
title: Additional file 1 of Gut microbiome of century-old snail specimens stable across time in preservation

description: Additional file 1: Supplementary Table 1. Chalifour, Elder, & Li 2021—Gut microbiome of century-old snail specimens stable across time in preservation.
DOI: 10.6084/m9.figshare.14936013
title: Whole-Genome Analysis and mutation pattern of SARS-CoV-2 during first and second wave outbreak in Gwangju, Republic of Korea

description: <b>Abstract</b><b>Objective</b>To investigate the specific genomic features and mutation pattern, whole and near-complete SARS-CoV-2 genome sequences were analyzed. <b>Methods</b>Clinical samples were collected from 18 COVID-19–positive patients and subjected to nucleic acid purification. Cell culture analysis was performed to extract various SARS-CoV-2 isolates. Whole-genome analysis was performed using next-generation sequencing, and phylogenetic analyses were conducted to determine genetic diversity of the various SARS-CoV-2 isolates.<b>Results</b>The next-generation sequencing data identified 8 protein-coding regions with 17 mutated proteins. We identified 51 missense point mutations and deletions in 5¢ and 3¢ untranslated regions. The phylogenetic analysis revealed that V and GH are the dominant clades of SARS-CoV-2 circulating in the Gwangju region of South Korea. Moreover, statistical analysis confirmed a significant difference between viral load (P &lt; 0.001) and number of mutations (P &lt; 0.0001) in 2 mutually exclusive SARS-CoV-2 clades which indicates frequent genomic alterations in SARS-CoV-2 in patients with high viral load. <b>Conclusion</b> Our results provide an in-depth analysis of SARS-COV-2 whole genome which we believe, can shed light in the understanding of SARS-COV-2 pathogenesis and mutation pattern which can aid in the development of prevention methods as well as future research into the pathogenesis of SARS-CoV-2 and therapeutic development.
DOI: 10.6084/m9.figshare.20176049.v1
title: Additional file 4 of Genome analysis and virulence gene expression profile of a multi drug resistant Salmonella enterica serovar Typhimurium ms202

description: Additional file 4: Table S4. Details of Phages identified in S. enterica Typhimurium ms202. A total of 9 different regions and each region containing different numbers of CDS are shown.
DOI: 10.6084/m9.figshare.20176049
title: Additional file 4 of Genome analysis and virulence gene expression profile of a multi drug resistant Salmonella enterica serovar Typhimurium ms202

description: Additional file 4: Table S4. Details of Phages identified in S. enterica Typhimurium ms202. A total of 9 different regions and each region containing different numbers of CDS are shown.
DOI: 10.6084/m9.figshare.20176058
title: Additional file 7 of Genome analysis and virulence gene expression profile of a multi drug resistant Salmonella enterica serovar Typhimurium ms202

description: Additional file 7: Table S7. The whole-genome annotation for virulent genes for S. enterica Typhimurium ms202. Genome – Salmonella enterica subsp. enterica serovar Typhimurium ms202; Genome ID - 90371.4806, Accession - 90371.4806.con.0001, Annotation – PATRIC, Feature Type – CDS.
DOI: 10.6084/m9.figshare.20176058.v1
title: Additional file 7 of Genome analysis and virulence gene expression profile of a multi drug resistant Salmonella enterica serovar Typhimurium ms202

description: Additional file 7: Table S7. The whole-genome annotation for virulent genes for S. enterica Typhimurium ms202. Genome – Salmonella enterica subsp. enterica serovar Typhimurium ms202; Genome ID - 90371.4806, Accession - 90371.4806.con.0001, Annotation – PATRIC, Feature Type – CDS.
DOI: 10.6084/m9.figshare.20176061
title: Additional file 8 of Genome analysis and virulence gene expression profile of a multi drug resistant Salmonella enterica serovar Typhimurium ms202

description: Additional file 8: Table S8. The whole-genome annotation for drug target specific genes for S. enterica Typhimurium ms202. Genome – Salmonella enterica subsp. enterica serovar Typhimurium MDR; Genome ID - 90371.4806, Accession - 90371.4806.con.0001, Annotation – PATRIC, Feature Type – CDS
DOI: 10.6084/m9.figshare.20176061.v1
title: Additional file 8 of Genome analysis and virulence gene expression profile of a multi drug resistant Salmonella enterica serovar Typhimurium ms202

description: Additional file 8: Table S8. The whole-genome annotation for drug target specific genes for S. enterica Typhimurium ms202. Genome – Salmonella enterica subsp. enterica serovar Typhimurium MDR; Genome ID - 90371.4806, Accession - 90371.4806.con.0001, Annotation – PATRIC, Feature Type – CDS
DOI: 10.6084/m9.figshare.20176087.v1
title: Additional file 1 of Providing an interactive undergraduate elective on safety culture online – concept and evaluation

description: Additional file 1.
DOI: 10.6084/m9.figshare.20176087
title: Additional file 1 of Providing an interactive undergraduate elective on safety culture online – concept and evaluation

description: Additional file 1.
DOI: 10.6084/m9.figshare.20176097
title: Additional file 3 of The down-regulation of XBP1, an unfolded protein response effector, promotes acute kidney injury to chronic kidney disease transition

description: Additional file 3. Proteomic analysis of differentially expressed proteins in HK-2 cells silenced of XBP1 compared to scramble control.
DOI: 10.6084/m9.figshare.20176097.v1
title: Additional file 3 of The down-regulation of XBP1, an unfolded protein response effector, promotes acute kidney injury to chronic kidney disease transition

description: Additional file 3. Proteomic analysis of differentially expressed proteins in HK-2 cells silenced of XBP1 compared to scramble control.
DOI: 10.6084/m9.figshare.20176100.v1
title: Additional file 1 of Kinome profiling of cholangiocarcinoma organoids reveals potential druggable targets that hold promise for treatment stratification

description: Additional file 1. Additional tables.
DOI: 10.6084/m9.figshare.20176100
title: Additional file 1 of Kinome profiling of cholangiocarcinoma organoids reveals potential druggable targets that hold promise for treatment stratification

description: Additional file 1. Additional tables.
DOI: 10.6084/m9.figshare.19956287
title: Metabolomics Data-Muscle.zip

description: BDE-47 (2,2', 4,4' - tetrabromodiphenyl ether) is the predominant congener of PBDEs (polybrominated diphenyl ethers) that can even be detected in human serum. It is also a persistent organic pollutant that has already been demonstrated to have neurotoxicity. To date, there have been few studies of the effects of BDE-47 on locomotor behavior in sea cucumber. In this study, we investigated the influence of different concentrations of BDE-47 (0.1 ug/L for low concentration, 1.0 ug/L for moderate concentration, 10.0 ug/L for high concentration) evaluated the change of muscle physiology in <em>A. japonicus</em> that exposed to BDE-47 by ultra performance liquid chromatography and quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF-MS)
DOI: 10.6084/m9.figshare.19956287.v2
title: Metabolomics Data-Muscle.zip

description: BDE-47 (2,2', 4,4' - tetrabromodiphenyl ether) is the predominant congener of PBDEs (polybrominated diphenyl ethers) that can even be detected in human serum. It is also a persistent organic pollutant that has already been demonstrated to have neurotoxicity. To date, there have been few studies of the effects of BDE-47 on locomotor behavior in sea cucumber. In this study, we investigated the influence of different concentrations of BDE-47 (0.1 ug/L for low concentration, 1.0 ug/L for moderate concentration, 10.0 ug/L for high concentration) evaluated the change of muscle physiology in <em>A. japonicus</em> that exposed to BDE-47 by ultra performance liquid chromatography and quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF-MS)
DOI: 10.6084/m9.figshare.19956287.v1
title: Metabolomics Data-Muscle.zip

description: BDE-47 (2,2', 4,4' - tetrabromodiphenyl ether) is the predominant congener of PBDEs (polybrominated diphenyl ethers) that can even be detected in human serum. It is also a persistent organic pollutant that has already been demonstrated to have neurotoxicity. To date, there have been few studies of the effects of BDE-47 on locomotor behavior in sea cucumber. In this study, we investigated the influence of different concentrations of BDE-47 (0.1 ug/L for low concentration, 1.0 ug/L for moderate concentration, 10.0 ug/L for high concentration) evaluated the change of muscle physiology in <em>A. japonicus</em> that exposed to BDE-47 by ultra performance liquid chromatography and quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF-MS)
DOI: 10.6084/m9.figshare.19956101
title: Locomotory Data.xlsx

description: BDE-47 (2,2', 4,4' - tetrabromodiphenyl ether) is the predominant congener of PBDEs (polybrominated diphenyl ethers) that can even be detected in human serum. It is also a persistent organic pollutant that has already been demonstrated to have neurotoxicity. To date, there have been few studies of the effects of BDE-47 on locomotor behavior in sea cucumber. In this study, we investigated the influence of different concentrations of BDE-47 (0.1 ug/L for low concentration, 1.0 ug/L for moderate concentration, 10.0 ug/L for high concentration) on locomotor behavior of <em>Apostichopus japonicus.</em>
DOI: 10.6084/m9.figshare.19956101.v2
title: Locomotory Data.xlsx

description: BDE-47 (2,2', 4,4' - tetrabromodiphenyl ether) is the predominant congener of PBDEs (polybrominated diphenyl ethers) that can even be detected in human serum. It is also a persistent organic pollutant that has already been demonstrated to have neurotoxicity. To date, there have been few studies of the effects of BDE-47 on locomotor behavior in sea cucumber. In this study, we investigated the influence of different concentrations of BDE-47 (0.1 ug/L for low concentration, 1.0 ug/L for moderate concentration, 10.0 ug/L for high concentration) on locomotor behavior of <em>Apostichopus japonicus.</em>
DOI: 10.6084/m9.figshare.19956101.v1
title: Locomotory Data.xlsx

description: BDE-47 (2,2', 4,4' - tetrabromodiphenyl ether) is the predominant congener of PBDEs (polybrominated diphenyl ethers) that can even be detected in human serum. It is also a persistent organic pollutant that has already been demonstrated to have neurotoxicity. To date, there have been few studies of the effects of BDE-47 on locomotor behavior in sea cucumber. In this study, we investigated the influence of different concentrations of BDE-47 (0.1 ug/L for low concentration, 1.0 ug/L for moderate concentration, 10.0 ug/L for high concentration) on locomotor behavior of <em>Apostichopus japonicus.</em>
DOI: 10.5281/zenodo.6777521
title: Emisiones Cambio Climatico PACES

description: Conjunto de indicadores que mide las emisiones de CO2 por los diferentes usos (residencial, institucional, movilidad) para los años 2005, 2015, 2019. También se mide la variación con respeto al 2005, año tomado de referencia. <strong>OBJETIVO</strong>: Disminuir las emisiones antropogénicas de CO2 originadas en la combustión de combustibles fósiles. <strong>OBJETIVO SOBRE EL QUE INCIDE</strong>: Mejorar la calidad del aire. <strong>TENDENCIA DESEADA</strong>: Disminución <strong>DEFINICIÓN MODO DE CÁLCULO</strong>: Para el inventario de emisiones 2019 completo se ha empleado la metodología EMPE/EEA-air pollutant emisión inventory guidebook-2019 y la guía 2006 IPPC Guidelines for National Greenhouse Gas Inventories. Para el inventario del PACES se ha seguido la metodología establecida en el Pacto de las Alcaldías. Unidad responsable o fuente: Servicio de Medio Ambiente y Sostenibilidad. Ayuntamiento de Zaragoza. Más información en: http://www.zaragoza.es/contenidos/medioambiente/2021-PACES-Zaragoza-2030.pdf y https://www.zaragoza.es/sede/portal/medioambiente/cambio-climatico/. Acceso a la ficha descriptiva del conjunto de indicadores
DOI: 10.5281/zenodo.6777520
title: Emisiones Cambio Climatico PACES

description: Conjunto de indicadores que mide las emisiones de CO2 por los diferentes usos (residencial, institucional, movilidad) para los años 2005, 2015, 2019. También se mide la variación con respeto al 2005, año tomado de referencia. <strong>OBJETIVO</strong>: Disminuir las emisiones antropogénicas de CO2 originadas en la combustión de combustibles fósiles. <strong>OBJETIVO SOBRE EL QUE INCIDE</strong>: Mejorar la calidad del aire. <strong>TENDENCIA DESEADA</strong>: Disminución <strong>DEFINICIÓN MODO DE CÁLCULO</strong>: Para el inventario de emisiones 2019 completo se ha empleado la metodología EMPE/EEA-air pollutant emisión inventory guidebook-2019 y la guía 2006 IPPC Guidelines for National Greenhouse Gas Inventories. Para el inventario del PACES se ha seguido la metodología establecida en el Pacto de las Alcaldías. Unidad responsable o fuente: Servicio de Medio Ambiente y Sostenibilidad. Ayuntamiento de Zaragoza. Más información en: http://www.zaragoza.es/contenidos/medioambiente/2021-PACES-Zaragoza-2030.pdf y https://www.zaragoza.es/sede/portal/medioambiente/cambio-climatico/. Acceso a la ficha descriptiva del conjunto de indicadores
DOI: 10.15156/bio/sh306891.07fu
title: SH306891.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh306892.07fu
title: SH306892.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1670090.08fu
title: SH1670090.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1670091.08fu
title: SH1670091.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.