cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1510980.v5
title: Long-term sediment oxygen demand and net N2 fluxes in Narragansett Bay, RI (USA)

description: Since 2005 I have been measuring sediment oxygen demand and sediment net N2 fluxes at two stations in Narragansett Bay. The first station is at the head of the Providence River Estuary and the second is located in mid-Narragansett Bay. Sediments are collected by divers at the mid-Narragansett Bay site and with pull corer in the Providence River estuary. At least triplicate cores are collected. Cores are 10 cm i.d. and 30.5 cm long. At the time of core collection filtered (0.2 micron) site water is also collected for use in the incubations. All incubations are conducted in batch mode in the dark and the overlying water is gently stirred (~ 40 rpm) with a magnetic stir bar. O2 and N2 fluxes are measured using the N2/Ar technique and a membrane inlet mass spectrometer. For further details please see the references associated with these data. Questions? please email: rwf@bu.edu. Units are: O2 micromoles per meter squared per hour N2-N micromoles per meter squared per hour Site Names: Prov = Providence River Estuary (PRE mean sampling depth: 3 m) Mid Bay = Mid Narragansett Bay (MNB mean sampling depth: 8 m) Overtime these values have been published in various places. The links below include all places where these data have been published. Many people have helped along the way from teaching me the ways of the mass spectrometer to helping collect sediment cores and analyze data. Special thanks to: J. Cornwell, P. Dimilla, S. Donovan, L. Fields, S. Foster, A. Giblin, S. Granger, K. Hanks, A. Hanson, E. Heiss, J. Iccano, M. Horn, T. Kana, J. Krumholz, C. McManus, J. Mercer, C. Mueller, M. Owens, A. Pimenta, MK Rogener, R. Schweiker, M. Traber, and J.Tucker. I thank Boston University for providing laboratory space and equipment for the most recent measurements.
DOI: 10.6084/m9.figshare.26393887.v1
title: Supplementary Material 1.xlsx

description: This is the supplementary material from Gonggoli et al. 2024 entitled "A new species of tree frog (Amphibia, Anura, Rhacophoridae) from Central Java, Indonesia"
DOI: 10.6084/m9.figshare.7598960.v1
title: Supplementary Material for: Efficacy and Safety of Topical 3% Diquafosol Ophthalmic Solution for the Treatment of Multifactorial Dry Eye Disease: Meta-Analysis of Randomized Clinical Trials

description: <b><i>Purpose:</i></b> A meta-analysis was performed to evaluate the safety and efficacy of topical 3% diquafosol in treating patients with dry eye disease (DED). <b><i>Methods:</i></b> Nine qualified randomized controlled trials incorporating 1,467 patients were included. Two of the reviewers selected the studies and independently assessed the risk of bias. The outcome measures were Schirmer score, tear film break-up time (TFBUT), rose bengal staining score, and corneal fluorescein staining score. To confirm the effect of diquafosol on dryness after cataract surgery, we performed a subgroup analysis according to the presence or absence of surgery. <b><i>Results:</i></b> We observed statistically significant improvements in scores on the Schirmer test (weighted mean difference 0.74 mm at 4 weeks; 95% CI: 0.24–1.24; <i>I</i><sup>2</sup> = 0%), fluorescein stain, rose bengal stain, and TFBUT after treatment with diquafosol compared with the group using other eye drops. As a result of the subgroup analysis of DED after cataract surgery, diquafosol was found to be more effective than the other eye drops with regard to TFBUT and rose bengal staining. <b><i>Conclusions:</i></b> Topical diquafosol could be an effective treatment for DED, and also for DED after cataract surgery. Further randomized controlled trials with larger sample sizes for the different clinical types of DED are warranted to determine the efficacy and limitations of diquafosol for these different clinical types of DED.
DOI: 10.17632/n5d7zs9x8m
title: Dataset of a Photovoltaic/Stirling fridge

description: The data presented is used to improve the design and operational parameters of a Stirling Beta refrigerator coupled to a Vitus II Monocrystalline photovoltaic system. Solar irradiation data for the commune of Njikinimeki are also presented.
DOI: 10.17632/z8mxtfpzp2
title: DaxibotulinumtoxinA for Injection has a prolonged duration of response in the treatment of glabellar lines: pooled data from two multicenter, randomized, double-blind, placebo-controlled, phase 3 studies (SAKURA 1 and SAKURA 2)

description: Supplemental figures: 1. Disposition of participants 2. Participants with at least a 1-point improvement in glabellar line severity 3. Participants with improvement on global aesthetic improvement scale 4. Duration of improvement in glabellar line severity before return to baseline levels 5. Participant global satisfaction at week 4 Supplemental tables: 1. Efficacy and satisfaction rating scales 2. Key eligibility criteria for study participation 3. Baseline demographics 4. Summary of glabellar line response duration data
DOI: 10.6084/m9.figshare.14325562.v1
title: Zooplankton community structure in the Yellow Sea and East China Sea in autumn

description: Abstract Study on zooplankton spatial distribution is essential for understanding food web dynamics in marine ecosystems and fishery management. Here we elucidated the composition and distribution of large mesozooplankton on the continental shelf of the Yellow Sea and East China Sea, and explored the zooplankton community structure in these water masses. Sixty vertical hauls (bottom or 200 m in deep water to surface) using a ring net (diameter 0.8 m, 505-μm mesh) were exploited in November 2007. The biogeographic patterns of zooplankton communities were investigated using multivariate analysis methods; copepod biodiversity was analyzed using univariate indices. Copepods and protozoans were dominate in the communities. Based on the species composition, we divided the study areas into six station groups. Significant differences in zooplankton assemblages were detected between the Yellow Sea and East China Sea. Species richness was higher in East China Sea groups than those in Yellow Sea, whereas taxonomic distinctness was higher in Yellow Sea than in East China Sea. There was a clear relationship between the species composition and water mass group.
DOI: 10.6084/m9.figshare.16947778.v1
title: Supplementary Material for: Focal Segmental Glomerulosclerosis Superimposed on Transplant Glomerulopathy: Implications for Graft Survival

description: <b><i>Introduction:</i></b> Transplant glomerulopathy (TG) is a morphological lesion resulting from chronic glomerular endothelium injury, and it is strongly associated with poor graft survival. TG coexisting with focal segmental glomerulosclerosis (FSGS) can be found in renal allograft biopsies, but few related studies are available. <b><i>Methods:</i></b> Consecutive kidney transplant recipients with biopsy-proven TG were studied retrospectively. Patients concomitant with FSGS were identified and compared with those without FSGS. The influence of FSGS on allograft outcomes was assessed using univariate and multivariate Cox regression models. <b><i>Results:</i></b> Of the 66 patients with TG, 40 (60.6%) had concomitant FSGS. TG patients with FSGS had higher proteinuria (median, 2.6 vs. 0.8 g/24 h, <i>p</i> &lt; 0.001) and serum creatinine levels (median, 2.5 vs. 2.1 mg/dL, <i>p</i> = 0.04), lower serum albumin levels, higher chronic glomerulopathy (cg) score, larger glomerular tuft area, lower number of podocytes, and higher incidences of podocyte hyperplasia, pseudotubule formation, and diffuse foot process effacement than those without FSGS (all <i>p</i> &lt; 0.05). The kidney allograft loss rate of patients with FSGS was higher than that of patients without FSGS (65.7% vs. 37.5%, <i>p</i> = 0.03). The presence of FSGS was independently associated with allograft loss in TG (hazard ratio (HR) = 3.42, 95% confidence interval (CI): 1.30–8.98, <i>p</i> = 0.01). Other independent predictors were proteinuria (HR = 1.18, 95% CI: 1.02–1.37, <i>p</i> = 0.02), estimated glomerular filtration rate (HR = 0.94, 95% CI: 0.91–0.97, <i>p</i> &lt; 0.001), and panel reactive antibody (HR = 3.99, 95% CI: 1.14–13.99, <i>p</i> = 0.03). Moreover, FSGS (odds ratio (OR) = 4.39, 95% CI: 1.29–14.92, <i>p</i> = 0.02) and cg (OR = 5.36, 95% CI: 1.56–18.40, <i>p</i> = 0.01) were independent risk factors for proteinuria. <b><i>Conclusion:</i></b> In this cohort of patients with TG, the presence of FSGS was strongly associated with more severe clinicopathological features and worse allograft survival.
DOI: 10.6084/m9.figshare.5172046.v1
title: data.xlsx

description: Data for publication PLOS one 2017<br><br>Survival analysis of conservative vs. dialysis treatment of elderly patients with CKD stage 5<br>
DOI: 10.17632/m6v5kjp9fd
title: Joint Optimization of Energy Consumption and Time Delay in IoT-Fog-Cloud Computing Environments using NSGA-II Metaheuristic Algorithm

description: In this work, we formulate the problem of joint optimization of energy consumption and latency in the form of a multi-objective problem and solve it using the Non-dominant Sorting Genetic Algorithm (NSGA-II). The simulation results show that the proposed method has good robustness in terms of important criteria such as energy consumption, time delay, and so on.
DOI: 10.6084/m9.figshare.13683607.v1
title: ne_50m_populated_places_simple.zip

description: Natural Earth is a public domain map dataset available at 1:10m, 1:50m, and 1:110 million scales. Featuring tightly integrated vector and raster data, with Natural Earth you can make a variety of visually pleasing, well-crafted maps with cartography or GIS software.
DOI: 10.6084/m9.figshare.14636964.v1
title: 605 data upload.sav

description: green consumption behavior
DOI: 10.6084/m9.figshare.26504344.v1
title: FISH_MurineTissues

description: Fluorescent in Situ Hybridization (FISH) image of:Murine gastric tissue, one week after infection with Helicobacter pylori.Murine jejunum tissue (BALB/c mouse) sectionMurine colorectal tumour tissue section from a genetic mouse model for colorectal cancer (Apc 1638N/wt x pvillin-Kras V12G). 40x objective. Blue: DAPI probe for DNA. Magenta: Eub338 DOPE bacteria probe. Green: CF319a probe for phylum Bacteroidetes, covering 90% Flavobacteria, 90% Sphingobacteria and 30% Bacteroides.
DOI: 10.6084/m9.figshare.28681454.v1
title: Supplementary Data 2.xlsx

description: Dataset-source data from Charts and Graphs
DOI: 10.6084/m9.figshare.29066633.v2
title: Data for Vietnamese Motivations for Attending Concerts: 2024 Case of Anh Trai Vuot Ngan Chong Gai Concert.pdf

description: This study aims to explore the factors influencing the concert attendance behavior of young audiences in Vietnam, particularly following the success of the reality show Anh Trai Vuot Ngan Chong Gai. The research employs a survey questionnaire combined with Exploratory Factor Analysis (EFA) to identify key factors.
DOI: 10.6084/m9.figshare.20113385.v1
title: Online Supplementary of Shi et al manuscript June 21 2022.pdf

description: There are supplemental data and figures of one manuscript titled as VEGFR2 insufficiency enhances phosphotoxicity and undermines Klotho’s protection against peritubular capillary rarefaction and kidney fibrosis. This basic research manuscript is accepted for publication in American Journal of Physiology-Renal Physiology. This research paper studied interplay of type 2 of vascular endothelial growth factor receptor (VEGFR2), high dietary phosphate and Klotho, an anti-aging protein, in peritubular structure and kidney fibrosis. Klotho protein was shown to maintain VEGFR2 expression in the kidney and reduce high phosphate-induced cell injury. But Klotho cytoprotection was attenuated by VEGFR2 inhibition. Thus, normal VEGFR2 function is required for vascular integrity and Klotho to exert vascular protective and anti-fibrotic actions in the kidney.
DOI: 10.6084/m9.figshare.28738775.v3
title: NoSQL Databases Flexibility and Power for the Modern Data Era

description: This paper explores the rise of NoSQL (Not Only SQL) databases as a modern alternative that addresses the demands of today’s dynamic, large-scale data environments. The goal is to provide a comprehensive and accessible overview of NoSQL systems and their increasing significance in modern data management.
DOI: 10.6084/m9.figshare.28845449.v1
title: <b>Safety of Median Nerve Electrical Stimulation in Disorders of Consciousness : A Systematic Review and Meta-analysis of Randomized Controlled Trials</b>

description: <b>Fig</b><b>1</b><b>.</b> <b>Study flow diagram</b><b>.</b> No adverse reactions reported: the outcomes of interest were not measured.Fig 2. Risk of bias in the analyzed studies. (A) Risk of bias graph. (B) Risk of bias summary.Fig 3. Forest plots for seizures, increased sympathetic nerve activity, arrhythmia, nausea and vomiting. (A) Forest plot for seizure. (B) Forest plot for increased sympathetic activity. (C) Forest plot for arrhythmia. (D) Forest plot for nausea and vomiting.Fig 4. Forest plots for lethargy, pulmonary infection, intracranial hemorrhage or hematoma, and gastrointestinal bleeding. (A) Forest plot for lethargy. (B) Forest plot for pulmonary infection. (C) Forest plot for intracranial hemorrhage or hematoma. (D) Forest plot for gastrointestinal bleeding.Fig 5. Funnel plot for increased sympathetic activity.Fig 6. Sensitivity analysis, forest plot and subgroup analysis of pulmonary infection. (A) Sensitivity analysis of pulmonary infection. (B) Forest plot for pulmonary infection. (C) Sub-group analysis of the outcomes of pulmonary infection according to the intervention measures; Group 1: Routine treatment+RMNS vs Routine treatment; Group 2: Routine treatment+Acupuncture+RMNS vs Routine treatment+Acupuncture.Raw data: the data required to replicate all the research findings reported in the article.
DOI: 10.17632/hpc938kng2
title: Meteorological and air quality observations at four automatic station in Rio de Janeiro, BRA, 2014-2018.

description: The dataset contains records from a four automatic air Quality and meteorological station (AQMS) on four differents sites (ADN- Adalgisa Nery, VSL – Vila São Luiz, PDC – Porto das Caixas, INE – Inea) in Metropolitan area of Rio de Janeiro, Brazil, and represent four features distinct (mobile fleet amount, industrial facilities, traffic urban, relief, microclimates and pollutant sources). The database was built from the daily hourly data (to 6:30 up to 18:30) provided by INEA (http://200.20.53.7/qualiar/home/index) between January 1, 2014 to December 31, 2018. These stations provide hourly data for several variables, such as: nitrogen dioxide (NO2), nitrogen monoxide (NO), carbon monoxide (CO), ozone (O3), solar radiation (SR), temperature (TEMP), relative humidity (RH), wind speed (WS), wind direction (WD), rainfall (RF), among others, which will be the variables studied in this project. The data provided here represents a cleaned and processed data set extracted from the original data. There are uncertainties associated with the data related to the circumstances of the station's operation (AQMS) and the extreme conditions at the site. Please see the related journal article for details on these issues.
DOI: 10.6084/m9.figshare.9992318.v1
title: Information on Peptides Included on Array

description: This file contains the names of the peptides represented in the peptide array output, the corresponding name in the various analyses, and the underlying amino acid sequence.
DOI: 10.6084/m9.figshare.23537805.v3
title: <b>Data for 'Soil microbial gene abundance rather than diversity and network complexity predominantly determines soil multifunctionality i</b><b>n Tibetan alpine grasslands along a precipitation gradient'</b>

description:  Soil microbes play a vital role in maintaining soil multifunctionality (SMF) that relates to carbon (C), nitrogen (N), and phosphorus (P) cycles and is severely threatened by climate change. However, how different microbial attributes such as microbial gene abundance, diversity, and network complexity affect soil multifunctionality is poorly understood. In this manuscript, we stressed the effects of diverse bacterial and fungal properties on soil multifunctionality including C sequestration and decomposition, nutrient mineralization and cycling, and microbial acquisition of C, N, and P resources along a natural precipitation gradient in Tibetan alpine grasslands. Our work is pivotal for understanding the roles of soil microbial communities in modulating soil multifunctionality under precipitation changes.
DOI: 10.6084/m9.figshare.24492382.v1
title: Data for "Estimation of capillary-associated NAPL-Water interfacial areas for unconsolidated porous media by kinetic interface sensitive (KIS) tracer method"

description: Experiment data of mercury injection porosimetry (MIP), static batch experiments, and column experiments in Tatomir et al. (2023) are presented here.
DOI: 10.6084/m9.figshare.24790914.v1
title: Database

description: Database used for the development of an algorithm based on decision tree and random forest
DOI: 10.17632/bj8896fkfx
title: Nonparametric Statistical Tests for The Impact of Video Games on Students’ Educational Outcomes

description: SPSS output for a Data in Brief article and an Entertainment Computing article.
DOI: 10.25442/hku.24939621.v1
title: Time Series Mapping of Global WUI Areas from 1985 to 2020

description: Intensifying wildfires and human settlement expansion have placed more people and infrastructure at the wildland–urban interface (WUI) areas under risk. Wildfire management and policy response are needed to protect ecosystems and residential communities; however, maps containing spatially explicit information on the distribution of WUI areas are limited to certain countries or local regions, and therefore global WUI patterns and associated wildfire exposure risk remain unclear. Here, we generated the global WUI data layers for 2020 baseline and 1985-2020 time series by incorporating fine-resolution housing and vegetation mapping. We estimated the total global WUI area to be 6.62 million km2. Time-series analysis revealed that global WUI areas experienced a substantial increase of 12.56% between 1985 and 2020. By overlapping 2001-2020 wildfire burned area maps and fine-resolution population dataset, our analysis revealed that globally, 7.07% (12.54%) of WUI areas housing 4.47 million (10.11 million) people are within a 2400-m (4800-m) buffer zone of wildfire threat. Regionally, we found that the United States, Brazil, China, India, and Australia account for the majority of WUI areas, but African countries experience higher wildfire risk. Our quantification of global WUI spatiotemporal patterns and the associated wildfire risk could support improvement of wildfire management.
DOI: 10.6084/m9.figshare.14331005.v1
title: California Port Activity Data

description: This dataset lists all recorded vessel entries for select ports along the California coast (US North Pacific) for the months of January through July 2018, 2019, and 2020.
DOI: 10.17632/5wsv28ppkn
title: Data for Manuscript: Molecular gut content analysis reveals predator feeding preferences and potential for biological control of aphids in sugar beet fields

description: The present dataset contains the results (positive/negative detections for Aphis fabae or Myzus persicae) of gut content PCR conducted on predatory arthropods collected in Danish sugar beet fields in 2022 and 2023. 
Additionally, the dataset contains results of digestion trials for Coccinella septempunctata, Cantharis lateralis and Chrysoperla carnea fed with Aphis fabae and Myzus persicae
DOI: 10.6084/m9.figshare.25655457.v2
title: <b>Unraveling the interplay of autophagy genes and KLF3/KLF8 in Colorectal cancer metastasis: A bioinformatics and cellular exploration</b>

description: The data is whole transcriptomics analysis (RNAseq) of 7 samples of isogenic colorectal cancer cell line HCT116 (parental wild HCT116, HCT116_negatic control, HCT116_Knocked out for ATG5, HCT116_Knocked out for ATG7). The cells were knocked out using Caspase Cas9 (ribonucleoprotein). RNA-seq data were analyzed using the Ion Torrent Software Suite version and the alignment was carried out using the Torrent Mapping Alignment Program (TMAP).
DOI: 10.6084/m9.figshare.19615404.v1
title: BioTranslator_Data.tar

description: These are the datasets in BioTranslator paper for protein function prediction and pathway analysis
DOI: 10.6084/m9.figshare.28416929.v1
title: Data for: Close males sing with dissimilar minimum frequency and repertoire size in a wild passerine

description: We investigated the association between song and position in social networks in males of the collared flycatcher (Ficedula albicollis), a passerine with complex songs and intense territorial interactions. Relying on 19 years of song recordings, we used multiple traits reflecting the spectral- and temporal characteristics and complexity of songs as well as syllable composition to investigate if similarity in song is associated with the position in neighbor networks. We also examined whether birds settle down in an age-dependent manner (as age is linked to individual quality) and whether the non-random spatial distribution of song is affected by the proportion of immigrants, young birds or the number of displaying males. We found that the minimum frequency and the repertoire size of neighbors differed, but this pattern was not shaped by the investigated predictors. Therefore, our results highlight the need to study communication traits and social environment together. The fact that neighboring males tend to sing differently with respect to some song traits suggests that song can be flexibly adjusted based on the performance of conspecifics. <br>
DOI: 10.17632/7msw2d62r6
title: Stepwise activities of mSWI/SNF family chromatin remodeling complexes direct T cell activation and exhaustion 

description: Unprocessed immunoblots for Battistello et al., Mol Cell 2023
DOI: 10.17632/kdr8wk63h6
title: Data for: Modal abundance, density and chemistry of micrometer-sized assemblages by advanced electron microscopy: application to chondrites

description: Here is an example of what it is possible to do using the ACADEMY methodology (Based on Hyperspy). This code is also available here: https://github.com/ZanettaPM/Demo-ACADEMY The github repository will be kept up to date
DOI: 10.6084/m9.figshare.16435662.v1
title: Chrysanthemum lavandulifolium genome assembly and annotation files

description: Chrysanthemum lavandulifolium genome assembly and annotation files <br>reference :The Chrysanthemum lavandulifolium genome and the molecular mechnism underlying the diverse capitulum types
DOI: 10.6084/m9.figshare.2067465
title: Experimental investigation of jet-induced resuspension of indoor deposited particles

description: Particles deposited on indoor surfaces may be resuspended and become airborne when disturbed by intensive jets. Depending on the intended purpose, the resuspension of deposited particles may be minimized or promoted. This investigation experimentally measured the resuspension of Arizona test dusts (ATDs) after a jet impingement. The simulating pulsed jets were created by a tube using compressed nitrogen gas. The jets were released into the test section in a wind tunnel that was cleaned by high-efficiency particulate air (HEPA) filters. The particle resuspension was evaluated by the dust-removal zone shapes on particle-laden plates, total dust-removal mass, and the number of airborne particles. The effects of the jet impingement heights, surface dust loads, and particle-laden plate surface roughness on particle resuspension were examined. This study revealed that sparsely deposited dusts indoors are more difficult to resuspend by jets than are densely deposited dusts. The jet impingement to a surface whose roughness is comparable to the particle diameters may cause severer airborne particle exposure than to surfaces with extremely small or large roughness values. For a high surface dust load, there is an optimal jet impingement height that can resuspend the maximum amount of the deposited dusts. Copyright © 2016 American Association for Aerosol Research