cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11261491
title: Supporting data for "Granularity of model input data impacts estimates of carbon storage in soils"

description: The exchange of carbon between the soil and the atmosphere is an important factor in climate change.  Soil organic carbon (SOC) storage is sensitive to land management, soil properties, and climatic conditions, and these data serve as key inputs to computer models projecting SOC change.  Farmland has been identified as a sink for atmospheric carbon, and we have previously estimated the potential for SOC sequestration in agricultural soils in Vermont, USA using the Rothamsted Carbon Model.  However, fine spatial-scale (high granularity) input data are not always available, which can limit the skill of SOC projections.  For example, climate projections are often only available at scales of 10s to 100s of km2.  To overcome this, we use a climate projection dataset downscaled to <1 km2  (~18,000 cells).  We compare SOC from runs forced by high granularity input data to runs forced by aggregated data averaged over the 11,690 km2 study region.  We spin up and run the model individually for each cell in the fine-scale runs and for the region in the aggregated runs factorially over three agricultural land uses and four Global Climate Models.  

In this repository are the downscaled climate input data that drive the RothC model, as well as the model outputs for each GCM.
DOI: 10.15468/dl.42ta3s
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cantinoa pinetorum (Epling) Harley & J.F.B.Pastore"
 ]
}

 The dataset includes 16 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251789-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.syuwaz
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea monocephala Aitch. & Hemsl."
 ]
}

 The dataset includes 34 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259826-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qwq7e4
title: Occurrence Download

description: A dataset containing 290 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium neoserratifrons T.Tyler"
 ]
}

 The dataset includes 290 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245431-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xng2u9
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gamochaeta spiciformis (Sch.Bip.) Cabrera",
 "HasCoordinate is true"
 ]
}

 The dataset includes 88 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038692-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mznvdh
title: Occurrence Download

description: A dataset containing 15867 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Catharus bicknelli (Ridgway, 1882)"
 ]
}

 The dataset includes 15867 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259823-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fgrwpg
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyptis mollis Pohl ex Benth."
 ]
}

 The dataset includes 53 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251767-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n2vfwc
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium neopicris Arv.-Touv."
 ]
}

 The dataset includes 103 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245427-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/gp3yyr4kcn.1
title: Dataset analysis: Chicken DNA in commercial sausage products from Sabah, Malaysia, using conventional polymerase chain reaction (PCR)

description: The dataset presents data on the detection of chicken DNA in commercial sausage products using the conventional polymerase chain reaction (PCR) method.

In the file (Chicken DNA Analysis in Sausage Products Using PCR):
Sheet 1: Concentration and Purity of DNA
Sheet 2: Gel Electrophoresis
Sheet 3: Statistical Analysis
DOI: 10.15468/dl.4y8tk9
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Epicharis affinis Smith, 1874",
 "Year 1970-2023"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038714-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4ah6x
title: Occurrence Download

description: A dataset containing 435 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea moschus (Hablitz) Bobrov"
 ]
}

 The dataset includes 435 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259829-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eeu5pj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium nesaeum Üksip"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245436-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uspe6v
title: Occurrence Download

description: A dataset containing 263 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oocephalus lythroides (Pohl ex Benth.) Harley & J.F.B.Pastore"
 ]
}

 The dataset includes 263 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251758-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aag3mr
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea multicaulis DC."
 ]
}

 The dataset includes 9 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259831-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zqwena
title: Occurrence Download

description: A dataset containing 299 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monolepta signata (Olivier, 1808)"
 ]
}

 The dataset includes 299 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038693-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hs259t
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyptis multibracteata Benth."
 ]
}

 The dataset includes 166 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251769-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vfrjaf
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium nigrescenticeps Omang"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245442-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xhfz9e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea neicevii (Kozuharov) Greuter"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259836-230224095556074/datasets/export for details.
DOI: 10.15468/dl.6ae7ex
title: Occurrence Download

description: A dataset containing 58319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gentiana verna L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 58319 records from 272 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038719-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jfsgfp
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Maripa williamsii Ooststr."
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019497-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rsjesu
title: Occurrence Download

description: A dataset containing 118 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cantinoa muricata (Schott ex Benth.) Harley & J.F.B.Pastore"
 ]
}

 The dataset includes 118 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251772-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vey6na
title: Occurrence Download

description: A dataset containing 15867 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Catharus bicknelli (Ridgway, 1882)"
 ]
}

 The dataset includes 15867 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259833-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bn943z
title: Occurrence Download

description: A dataset containing 8041 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calliopsis andreniformis Smith, 1853",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8041 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069849-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.umr35b
title: Occurrence Download

description: A dataset containing 167 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Garcinia cowa Roxb.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 167 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038696-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cuh6kr
title: Occurrence Download

description: A dataset containing 2770 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Styela plicata (Lesueur, 1823)"
 ]
}

 The dataset includes 2770 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069850-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vwpyf9
title: Occurrence Download

description: A dataset containing 908 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea multiflora (L.) B.Fedtsch."
 ]
}

 The dataset includes 908 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259834-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.se64a6
title: Occurrence Download

description: A dataset containing 4612 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Spiders (Arachnida: Araneae) Mordovia State Nature Reserve and National Park \"Smolny\" (Russia)"
 ]
}

 The dataset includes 4612 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251791-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uw9ce9
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium calothyrsum Zahn ex Murr"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245446-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hfmxwy
title: Occurrence Download

description: A dataset containing 1267 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geoffroea decorticans (Gillies ex Hook. & Arn.) Burkart",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1267 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038720-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3wpkyf
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea nivea C.Winkl."
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259837-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cdhc24
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium neyranum Arv.-Touv."
 ]
}

 The dataset includes 35 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245438-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.23jwry
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oocephalus piranii (Harley) Harley & J.F.B.Pastore"
 ]
}

 The dataset includes 31 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251793-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4m6g5q
title: Occurrence Download

description: A dataset containing 1998 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Triatoma pseudomaculata Correa & Espínola, 1964",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 }
 ]
}

 The dataset includes 1998 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069852-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j89u3g
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea multiloba Iljin"
 ]
}

 The dataset includes 31 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259835-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qktjz3
title: Occurrence Download

description: A dataset containing 29432 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-6.53126 36.69395,-6.32987 36.03855,-5.49078 35.87554,-4.86985 36.41085,-5.64182 37.13672,-6.53126 36.69395))",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 29432 records from 108 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038721-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mrbnyr
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cantinoa macrotera (Briq.) Harley & J.F.B.Pastore"
 ]
}

 The dataset includes 25 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251760-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zgnavh
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyperus chaetophyllus (Chiov.) Kük."
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019498-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5w669m16
title: MassIVE MSV000094987 - Molecular Insights into Regulated Intron Retention in the Nervous System and its Functional Impact
title: Proteins were extracted from 15 Drosophila melanogaster heads using a Dounce homogenizer and lysed in 200 uL of lysis buffer (10 mM Tris-HCl pH 7.5, 150 mM NaCl, 2 mM MgCl2, 1 percent NP-40, 0.5 percent Triton-X 100, protease phosphatase inhibitors, 0.5 uL Benzonase, ddH2O). The lysates were incubated at 4degree C for 30 minutes and then centrifuged at 10,000 rpm for 10 minutes at 4degree C. The supernatant (175 uL) was transferred to new tubes, and 5 percent was run on a gel for silver staining. Protein extracts underwent Methanol Chloroform extraction, and the pellets were dried. Dried protein pellets were dissolved in 60 uL of 100 mM Tris-HCl, pH 8.5, 8 M urea, reduced with 5 mM TCEP, and incubated at room temperature for 30 minutes. Carboxymethylation was done with 10 mM chloroacetamide in the dark for 30 minutes. Sequential digestion with Lys-C and trypsin was performed at 37degree C overnight, and the reaction was quenched with formic acid to 5 percent . Peptides were subjected to C18 solid-phase extraction, dried, reconstituted in 10.5 uL HPLC grade water, and quantified. After quantification, 200 mM TEAB was added to a final concentration of 100 mM, mixed with iRT standard peptides, and labeled with TMT reagents. Labeling efficiency (85-95 percent ) was assessed by RPLC MSMS, and TMT-labeled peptides were mixed, dried, and fractionated using high pH Pierce cartridges. TMT-labeled fractions were analyzed on an Orbitrap Fusion Lumos mass spectrometer coupled to a Dionex UltiMate 3000 RSCLnano System. Peptides were loaded onto an Acclaim PepMap 100 C18 trap cartridge. Chromatography was performed with a gradient and a nano pump flow rate set to 150 nL min. The SPS-MS3 method was used with specified settings for resolution, isolation windows, and ion injection times. LC MSn data was processed using Proteome Discoverer 3.0, with MS2 spectra searched against a Drosophila melanogaster database using SEQUEST-HT. Results were filtered to a 1 percent FDR at the peptide level, and proteins were quantified by summing reporter ion intensities. IAF was calculated as (protein TMT intensity) divided by (protein length). IAFw and FPKMw were computed using the average cubic roots of respective values and gene occurrences.
DOI: 10.15468/dl.3hd92s
title: Occurrence Download

description: A dataset containing 594 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Garcinia mangostana L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 594 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038697-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xp55gt
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Observation",
 "Year 1000-2018",
 "TaxonKey is Caretta caretta (Linnaeus, 1758)"
 ]
}

 The dataset includes 220 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019178-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qdvbn9
title: Occurrence Download

description: A dataset containing 1125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Iodopleura pipra (Lesson, 1831)"
 ]
}

 The dataset includes 1125 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178907-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zbckup
title: Occurrence Download

description: A dataset containing 1489 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Sclerochloa dura (L.) P.Beauv."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1489 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019179-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.