cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.u4mswg
title: Occurrence Download

description: A dataset containing 23790 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Urocissa caerulea Gould, 1863"
 ]
}

 The dataset includes 23790 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0098145-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5rjfcw
title: Occurrence Download

description: A dataset containing 987361 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Belgium, Germany, Netherlands)",
 "TaxonKey is one of (Ondatra zibethicus (Linnaeus, 1766), Myocastor coypus (Molina, 1782))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 987361 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131401-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-26269
title: Correspondence book No. 1 of Pentecostal Missionary Union [PMU], 1914-1920

description: [description english/roman)] Pentecostal Missionary Union [PMU] Correspondence book No. 2 including 61 pages of subject index; 2011 pages of PMU outgoing correspondence;
DOI: 10.15468/dl.mh5tk8
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Naturalis Biodiversity Center (NL) - Botany",
 "TaxonKey is Archidendron trifoliolatum de Wit"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0372753-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.94vk6j
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-78.9146987000000024 40.3229253000000014, -78.9146987000000024 40.3259015599999984, -78.9146987000000024 40.3290431799999993, -78.9146987000000024 40.3338382700000011, -78.9146987000000024 40.3361531400000004, -78.9146987000000024 40.3394600999999966, -78.9103857500000032 40.3394600999999966, -78.9075653700000004 40.3394600999999966, -78.9042472900000007 40.3394600999999966, -78.9010951100000000 40.3394600999999966, -78.8972793100000018 40.3394600999999966, -78.8946253999999954 40.3394600999999966, -78.8946253999999954 40.3373105800000005, -78.8946253999999954 40.3344996599999988, -78.8946253999999954 40.3310273499999994, -78.8946253999999954 40.3280510900000024, -78.8946253999999954 40.3244134299999999, -78.8946253999999954 40.3229253000000014, -78.8974452199999945 40.3229253000000014, -78.9009291999999931 40.3229253000000014, -78.9032518599999975 40.3229253000000014, -78.9085608000000036 40.3229253000000014, -78.9123766000000018 40.3229253000000014, -78.9146987000000024 40.3229253000000014))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 101 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099441-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nuvnwx
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isis reticulata Nutting, 1910"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131407-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-26506
title: Correspondence book No. 1 of Pentecostal Missionary Union [PMU], 1914-1920

description: [description english/roman)] Pentecostal Missionary Union [PMU] Correspondence book No. 2 including 61 pages of subject index; 2011 pages of PMU outgoing correspondence;
DOI: 10.15468/dl.82t9kk
title: Occurrence Download

description: A dataset containing 118 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zosterops consobrinorum A.B.Meyer, 1904"
 ]
}

 The dataset includes 118 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0372751-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8qzyyp
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stylochaeton shabaensis Malaisse & Bamps"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147494-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nh8y3m
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-95.6962905999999975 39.0485542999999993, -95.6962905999999975 39.0495432399999984, -95.6962905999999975 39.0500926500000034, -95.6962905999999975 39.0510266499999972, -95.6962905999999975 39.0520705200000009, -95.6962905999999975 39.0527847600000015, -95.6962905999999975 39.0540483999999992, -95.6953596000000033 39.0540483999999992, -95.6937717299999946 39.0540483999999992, -95.6923481299999992 39.0540483999999992, -95.6914173100000056 39.0540483999999992, -95.6903222400000004 39.0540483999999992, -95.6889532000000003 39.0540483999999992, -95.6889532000000003 39.0529495800000035, -95.6889532000000003 39.0519606399999972, -95.6889532000000003 39.0506969999999995, -95.6889532000000003 39.0497629999999987, -95.6889532000000003 39.0485542999999993, -95.6904317399999940 39.0485542999999993, -95.6911982999999964 39.0485542999999993, -95.6920743600000065 39.0485542999999993, -95.6930051800000001 39.0485542999999993, -95.6944835299999994 39.0485542999999993, -95.6952500900000018 39.0485542999999993, -95.6962905999999975 39.0485542999999993))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 63 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099456-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-233169
title: United National Auxiliary Convention, COGIC, syllabus, 1990

description: [description english/roman)] United National Auxiliary Convention, Church of God in Christ (COGIC), syllabus, "UNAC in training, vo. VI", San Francisco, California, 1990 July 2-7.
DOI: 10.15468/dl.tu3s3t
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haworthia monticola Fourc.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063260-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9s24ys
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vincetoxicum sakesarense Ali & Khatoon"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031395-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mdtb68
title: Occurrence Download

description: A dataset containing 10232 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erysimum virgatum Roth"
 ]
}

 The dataset includes 10232 records from 172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062572-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-237834
title: Women's day program, Jude Tabernacle, COGIC, Chilton, Texas, 1997

description: [description english/roman)] 6th Women's day program, "Holy women strengthen your grip as we move forward together in the year of 2000 and beyond", Jude Tabernacle Church of God in Christ, Chilton, Texas, 1997 June 22.
DOI: 10.15468/dl.ddqk5b
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hirtella zanzibarica Oliv."
 ]
}

 The dataset includes 227 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0396710-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e2qyv6
title: Occurrence Download

description: A dataset listing the 12 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is FBIP:ELM: Malacology Collections",
 "Geometry POLYGON((-80.83101 45.43762,-80.41438 45.43762,-80.41438 46.00376,-80.83101 46.00376,-80.83101 45.43762))",
 "OccurrenceStatus is Present",
 "TaxonKey is Unionida"
 ]
}

 The dataset's 12 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0089018-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tupmu9
title: Occurrence Download

description: A dataset containing 120451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-116.64139 31.67474,-116.46378 31.64513,-116.47659 31.94393,-116.62125 31.94238,-116.61575 31.84288,-116.64139 31.67474))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 120451 records from 201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0092653-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-237155
title: Annual state women's convention, Central Florida, COGIC (30th: 2004), program

description: [description english/roman)] 30th Annual state women's convention, "Holy women bonding and fulfilling their God given assignment", Central Florida, COGIC, Kissimmee, Florida, 2004 September 28 - October 1.
DOI: 10.15468/dl.hhdbxf
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haworthia bayeri J.D.Venter & S.A.Hammer",
 "HasCoordinate is true"
 ]
}

 The dataset includes 25 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063264-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2rqs55
title: Occurrence Download

description: A dataset containing 3774 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Carlina corymbosa L."
 ]
}

 The dataset includes 3774 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088983-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-237850
title: Annual Holy Convocation of the Church of God in Christ (91st: 1998), Women's day program

description: [description english/roman)] Women's day program, "Holiness: a proven foundation for a promising future", 91st Annual Holy Convocation of the Church of God in Christ, Memphis, Tennessee, 1998 November 5.
DOI: 10.15468/dl.b54uxz
title: Occurrence Download

description: A dataset containing 16211 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Luzula spicata (L.) DC.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 16211 records from 131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0244865-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ry722m
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllanthus parainduratus M.Schmid"
 ]
}

 The dataset includes 22 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0201373-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-233267
title: J.W. Wilson Institute meeting program & syllabus, [s.d.]

description: [description english/roman)] J.W. Wilson Institute meeting program and syllabus, [s.d.].
DOI: 10.25549/pcra-c14-233263
title: J.W. Wilson Institute meeting program & syllabus, [s.d.]

description: [description english/roman)] J.W. Wilson Institute meeting program and syllabus, [s.d.].
DOI: 10.5281/zenodo.17804297
title: Supporting code for analysis of sequencing data in Kaur et al. Overcoming host restrictions to enable continuous passaging of GII.3 human norovirus in human intestinal enteroids

description: Supporting files and code for the manuscript:

Overcoming host restrictions to enable continuous passaging of GII.3 human norovirus in human intestinal enteroids

Gurpreet Kaur, Sue E. Crawford, Sara Javornik Cregeen, Anil Surathu, B. Vijayalakshmi Ayyar, Carmen V. Apostol, Hoa Nguyen Phuc, Khalil Ettayebi, Aaya Boussattach, Xi-Lei Zeng, Sarah E. Blutt, Harsha Doddapaneni, Donna M. Muzny, Cristian Coarfa, Ramakrishnan Anish, B.V. Venkataram Prasad, Robert L. Atmar, Sasirekha Ramani, Mary K. Estes

The establishment of human intestinal enteroids (HIEs) as a model for human norovirus (HuNoV) replication has been transformative for studying this leading cause of gastroenteritis. However, indefinite passaging of HuNoVs in HIEs remained a challenge, necessitating the use of patient stool samples as viral inocula. Using RNA-seq, we identified CXCL10, CXCL11, and CCL5 as highly upregulated chemokines, suggesting their potential as host restriction factors. TAK-779, a CXCR3/CCR5/CCR2 antagonist, enhanced GII.3 HuNoV replication and viral spread in a dose- and time-dependent manner, enabling successful passaging of GII.3 HuNoV in two different HIE lines and generation of viral stocks. Sequencing with passaging revealed one consensus change in the major capsid protein and several dynamic adaptations, suggesting emergence of variants. TAK-779 also enhanced replication of GI.1 and GII.17 strains, but not GII.4, suggesting strain-specific host interactions or immune evasion. This breakthrough in passaging provides new insight into HuNoV-host interactions, establishes a scalable in vitro system for virus propagation, and opens avenues for structural, biochemical, and therapeutic studies with virus stocks.

This upload contains:





tak-779-GII3-fig8_suppFig6-7.zip: code and files needed to generate Figure 8 and Supplementary figures 6 & 7: Genetic changes during serial passages of GII.3 HuNoV in HIEs reveal one consensus change and dynamic variant shifts.


tak-779-GII3_VCpipeline.zip: code used to perform variant calling on the NoV passaging sequence data. Github repo can be found here: https://github.com/BCM-GCID/viral-variant-calling-pipeline
DOI: 10.5281/zenodo.17804298
title: Supporting code for analysis of sequencing data in Kaur et al. Overcoming host restrictions to enable continuous passaging of GII.3 human norovirus in human intestinal enteroids

description: Supporting files and code for the manuscript:

Overcoming host restrictions to enable continuous passaging of GII.3 human norovirus in human intestinal enteroids

Gurpreet Kaur, Sue E. Crawford, Sara Javornik Cregeen, Anil Surathu, B. Vijayalakshmi Ayyar, Carmen V. Apostol, Hoa Nguyen Phuc, Khalil Ettayebi, Aaya Boussattach, Xi-Lei Zeng, Sarah E. Blutt, Harsha Doddapaneni, Donna M. Muzny, Cristian Coarfa, Ramakrishnan Anish, B.V. Venkataram Prasad, Robert L. Atmar, Sasirekha Ramani, Mary K. Estes

The establishment of human intestinal enteroids (HIEs) as a model for human norovirus (HuNoV) replication has been transformative for studying this leading cause of gastroenteritis. However, indefinite passaging of HuNoVs in HIEs remained a challenge, necessitating the use of patient stool samples as viral inocula. Using RNA-seq, we identified CXCL10, CXCL11, and CCL5 as highly upregulated chemokines, suggesting their potential as host restriction factors. TAK-779, a CXCR3/CCR5/CCR2 antagonist, enhanced GII.3 HuNoV replication and viral spread in a dose- and time-dependent manner, enabling successful passaging of GII.3 HuNoV in two different HIE lines and generation of viral stocks. Sequencing with passaging revealed one consensus change in the major capsid protein and several dynamic adaptations, suggesting emergence of variants. TAK-779 also enhanced replication of GI.1 and GII.17 strains, but not GII.4, suggesting strain-specific host interactions or immune evasion. This breakthrough in passaging provides new insight into HuNoV-host interactions, establishes a scalable in vitro system for virus propagation, and opens avenues for structural, biochemical, and therapeutic studies with virus stocks.

This upload contains:





tak-779-GII3-fig8_suppFig6-7.zip: code and files needed to generate Figure 8 and Supplementary figures 6 & 7: Genetic changes during serial passages of GII.3 HuNoV in HIEs reveal one consensus change and dynamic variant shifts.


tak-779-GII3_VCpipeline.zip: code used to perform variant calling on the NoV passaging sequence data. Github repo can be found here: https://github.com/BCM-GCID/viral-variant-calling-pipeline
DOI: 10.17026/ar/e5asxr
title: PAN-00178324 - terra sigillata plate type Drag. 36

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00178324&lt;/p&gt;
description: Modified: 2025-09-23T16:08:32+02:00
DOI: 10.15468/dl.m6x6e3
title: Occurrence Download

description: A dataset containing 15174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mesembryanthemum crystallinum",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15174 records from 195 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025566-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/44821
title: Chandra X-ray Observatory ObsId 44821
DOI: 10.25574/44828
title: Chandra X-ray Observatory ObsId 44828
DOI: 10.15468/dl.wp5scx
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ateles marginatus",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 133 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025567-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nz77jt
title: Occurrence Download

description: A dataset containing 122491904 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 122491904 records from 12423 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025505-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4cchcn
title: Occurrence Download

description: A dataset containing 851 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is one of (Thanatus striatus C.L.Koch, 1845)",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 1901",
 "Year is less than or equal to 2019",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 851 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018332-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21223/tiowxr/18hg6o
title: 4_Soil analysis LS2.tab

description: :unav
DOI: 10.21223/tiowxr/nlffsu
title: 1_Harvest LS2.tab

description: :unav
DOI: 10.21223/tiowxr/p0c9ul
title: La Soledad S2.jpg

description: :unav
DOI: 10.21223/tiowxr/u1si6b
title: 2_Yield-BCR-CF LS2.tab

description: :unav
DOI: 10.21223/tiowxr/yrmmxs
title: Design Schematic_OA.tab

description: :unav
DOI: 10.21223/tiowxr/z2dzrg
title: 3_Dry matter of tuber LS2.tab

description: :unav
DOI: 10.21223/tiowxr/gdld3x
title: 5_Data_Dictionary_OA.xlsx

description: :unav
DOI: 10.5281/zenodo.13770149
title: Misinformation in the classroom: perceptions of Journalism students

description: This data results are used in an article that studied the perception of undergraduate Journalism students at a University in the mountains of Santa Catarina (Brazil) about misinformation.
DOI: 10.5281/zenodo.13770150
title: Misinformation in the classroom: perceptions of Journalism students

description: This data results are used in an article that studied the perception of undergraduate Journalism students at a University in the mountains of Santa Catarina (Brazil) about misinformation.