cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/inscriptifact-ouc111324059
title: Cuneiform Tablet

description: [Text Description:] Cuneiform Tablet, Administrative Tag, with Seal Impressions ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script, roughly triangular In shape.
DOI: 10.25549/inscriptifact-ouc111323988
title: Cuneiform Tablet

description: [Text Description:] Cuneiform Tablet, Administrative Tag, with Seal Impressions ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script, roughly triangular In shape.
DOI: 10.25549/inscriptifact-ouc111324037
title: Cuneiform Tablet

description: [Text Description:] Cuneiform Tablet, Administrative Tag, with Seal Impressions ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script, roughly triangular In shape.
DOI: 10.25549/inscriptifact-ouc111324306
title: Cuneiform Tablet

description: [Text Description:] Cuneiform Tablet, Administrative Tag, with Seal Impressions ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script, roughly triangular In shape.
DOI: 10.25549/inscriptifact-ouc111331569
title: Rice Psalter, MS.000372

description: [Text Description:] Illuminated Latin Psalter; on back flyleaves 16th c. accounts ❧ [Text or Publication Number Note:] MS.000372 ❧ [Medium:] Parchment ❧ [Script Note:] Latin ❧ [Physical Object Description:] 133 + ii leaves; 11.9 x 8.7 x 2.1 in. (30.3 x 22.2 x 5.3 cm) ❧ [Physical Object Note:] Vellum with ink ❧ [Physical Object Note:] Illuminations
DOI: 10.25549/inscriptifact-ouc111331622
title: Rice Psalter, MS.000372

description: [Text Description:] Illuminated Latin Psalter; on back flyleaves 16th c. accounts ❧ [Text or Publication Number Note:] MS.000372 ❧ [Medium:] Parchment ❧ [Script Note:] Latin ❧ [Physical Object Description:] 133 + ii leaves; 11.9 x 8.7 x 2.1 in. (30.3 x 22.2 x 5.3 cm) ❧ [Physical Object Note:] Vellum with ink ❧ [Physical Object Note:] Illuminations
DOI: 10.25549/inscriptifact-ouc111331576
title: Rice Psalter, MS.000372

description: [Text Description:] Illuminated Latin Psalter; on back flyleaves 16th c. accounts ❧ [Text or Publication Number Note:] MS.000372 ❧ [Medium:] Parchment ❧ [Script Note:] Latin ❧ [Physical Object Description:] 133 + ii leaves; 11.9 x 8.7 x 2.1 in. (30.3 x 22.2 x 5.3 cm) ❧ [Physical Object Note:] Vellum with ink ❧ [Physical Object Note:] Illuminations
DOI: 10.25549/inscriptifact-ouc111331542
title: Rice Psalter, MS.000372

description: [Text Description:] Illuminated Latin Psalter; on back flyleaves 16th c. accounts ❧ [Text or Publication Number Note:] MS.000372 ❧ [Medium:] Parchment ❧ [Script Note:] Latin ❧ [Physical Object Description:] 133 + ii leaves; 11.9 x 8.7 x 2.1 in. (30.3 x 22.2 x 5.3 cm) ❧ [Physical Object Note:] Vellum with ink ❧ [Physical Object Note:] Illuminations
DOI: 10.15468/dl.jvgh4h
title: Occurrence Download

description: A dataset listing the 2143498 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 2143498 records were derived from 25936 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0094019-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.azxba8
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cassiope wardii C.Marquand & Airy Shaw"
 ]
}

 The dataset includes 72 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046402-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8gbpp
title: Occurrence Download

description: A dataset listing the 4016173 species recorded in GBIF matching the query:
{ }

 The dataset's 4016173 records were derived from 70069 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046388-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qddfp7
title: Occurrence Download

description: A dataset containing 1097 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liriomyza trifolii (Burgess, 1880)"
 ]
}

 The dataset includes 1097 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046405-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cetbjx
title: Occurrence Download

description: A dataset containing 43319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Rapistrum rugosum (L.) All."
 ]
}

 The dataset includes 43319 records from 755 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046406-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.by5wrk
title: Occurrence Download

description: A dataset containing 1704536 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Swiss National Moths Databank"
 ]
}

 The dataset includes 1704536 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046395-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qb57a4
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acipenseriformes",
 "Country is Japan",
 "Year is 1854,2023",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046407-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14545881
title: Asteroid Impact, Not Volcanism, Driven the End-Cretaceous Marine Extinctions

description: This dataset includes the modeled data associated with the impact-driven marine extinctions at the end of the Cretaceous, specifically simulating the effects of the asteroid impact on marine ecosystem responses.

 

For assistance with the model setup or data interpretation, please contact me (chenyihui@stu.pku.edu.cn).

 

For access to additional model outputs or further information on the simulation variables, please contact Prof. Hu Yongyun (yyhu@pku.edu.cn) for help.
DOI: 10.5281/zenodo.14545882
title: Asteroid Impact, Not Volcanism, Driven the End-Cretaceous Marine Extinctions

description: This dataset includes the modeled data associated with the impact-driven marine extinctions at the end of the Cretaceous, specifically simulating the effects of the asteroid impact on marine ecosystem responses.

 

For assistance with the model setup or data interpretation, please contact me (chenyihui@stu.pku.edu.cn).

 

For access to additional model outputs or further information on the simulation variables, please contact Prof. Hu Yongyun (yyhu@pku.edu.cn) for help.
DOI: 10.6084/m9.figshare.27646300
title: The complete mitochondrial genome of <i>Epicauta sibirica</i> Pallas, 1773 (Coleoptera: Meloidae)

description: <i>Epicauta sibirica</i> is both an important pest and an important economic insect. The mitogenome is 15,717 bp in length and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. The nucleotide composition of <i>E. sibirica</i> is 37.0% of A, 18.3% of C, 11.3% of G, and 33.4% of T. The genus <i>Epicauta</i> was detected as a monophyletic group and more closely related to the genus <i>Lytta</i> than other genera within Meloidae. This study supplemented additional genetic data for future research on the phylogeny and evolution of Meloidae species.
DOI: 10.6084/m9.figshare.27646300.v1
title: The complete mitochondrial genome of <i>Epicauta sibirica</i> Pallas, 1773 (Coleoptera: Meloidae)

description: <i>Epicauta sibirica</i> is both an important pest and an important economic insect. The mitogenome is 15,717 bp in length and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. The nucleotide composition of <i>E. sibirica</i> is 37.0% of A, 18.3% of C, 11.3% of G, and 33.4% of T. The genus <i>Epicauta</i> was detected as a monophyletic group and more closely related to the genus <i>Lytta</i> than other genera within Meloidae. This study supplemented additional genetic data for future research on the phylogeny and evolution of Meloidae species.
DOI: 10.6084/m9.figshare.27458369
title: Characterization and phylogenetic analysis of the complete chloroplast genome sequence of <i>Phalaenopsis deliciosa</i> (Rchb. f. 1854)

description: <i>Phalaenopsis deliciosa</i> (Rchb. f.), an ornamental orchid known for vibrant flowers, has a 148,090 bp chloroplast genome with 36.78% GC content. It includes an 85,241 bp large single-copy (LSC) region, an 11,649 bp small single-copy (SSC) region, and two 13,800 bp inverted repeats (IRs), encoding 122 genes (76 protein-coding, 38 tRNA, and 8 rRNA). This genome data refines the <i>Phalaenopsis</i> gene database and supports research on phylogeny and molecular breeding.
DOI: 10.6084/m9.figshare.27458369.v1
title: Characterization and phylogenetic analysis of the complete chloroplast genome sequence of <i>Phalaenopsis deliciosa</i> (Rchb. f. 1854)

description: <i>Phalaenopsis deliciosa</i> (Rchb. f.), an ornamental orchid known for vibrant flowers, has a 148,090 bp chloroplast genome with 36.78% GC content. It includes an 85,241 bp large single-copy (LSC) region, an 11,649 bp small single-copy (SSC) region, and two 13,800 bp inverted repeats (IRs), encoding 122 genes (76 protein-coding, 38 tRNA, and 8 rRNA). This genome data refines the <i>Phalaenopsis</i> gene database and supports research on phylogeny and molecular breeding.
DOI: 10.6084/m9.figshare.27678984
title: The complete mitochondrial genome of the <i>Rhacophorus chenfui</i> Liu, 1945 and its phylogenetic analyses

description: We described the complete mitogenome sequence of <i>Rhacophorus chenfui</i> in this research. The circular mitogenome of R. <i>chenfui</i> is total length with 20,520 bp, encoded 39 genes (24 tRNA genes, 13 protein-coding genes, 2 rRNA genes) and two D-loop regions. The base composition of the mitogenome is 33.46% A, 30.80% T, 23.05% C, and 12.69% G. All tRNAs have the typical clover-leaf structure except for tRNA<sup>Ser1(AGN)</sup> which have a reduced DHU arm. The results showed that R. <i>chenfui</i> is closely related with R. <i>schlegelii</i>, R. <i>arboreus</i>, <i>Zhangixalus omeimontis</i> and <i>Z. dugritei</i>. This work enriches the library of Rhacophoridae mitoenomes and provides a valuable resource for understanding the evolutionary history of <i>Rhacophorus</i>.
DOI: 10.6084/m9.figshare.27678984.v1
title: The complete mitochondrial genome of the <i>Rhacophorus chenfui</i> Liu, 1945 and its phylogenetic analyses

description: We described the complete mitogenome sequence of <i>Rhacophorus chenfui</i> in this research. The circular mitogenome of R. <i>chenfui</i> is total length with 20,520 bp, encoded 39 genes (24 tRNA genes, 13 protein-coding genes, 2 rRNA genes) and two D-loop regions. The base composition of the mitogenome is 33.46% A, 30.80% T, 23.05% C, and 12.69% G. All tRNAs have the typical clover-leaf structure except for tRNA<sup>Ser1(AGN)</sup> which have a reduced DHU arm. The results showed that R. <i>chenfui</i> is closely related with R. <i>schlegelii</i>, R. <i>arboreus</i>, <i>Zhangixalus omeimontis</i> and <i>Z. dugritei</i>. This work enriches the library of Rhacophoridae mitoenomes and provides a valuable resource for understanding the evolutionary history of <i>Rhacophorus</i>.
DOI: 10.6084/m9.figshare.27879834
title: Complete chloroplast genome sequence of <i>Solanum mochiquense</i>, one of the tuber-bearing potato relatives

description: <i>Solanum mochiquense</i> is one of the wild tuber-bearing <i>Solanum</i> species belonging to the Solanaceae family. In this study, the chloroplast genome sequence of the species was completed with Illumina sequencing technology. The total length of the chloroplast genome is 155,547 bp with a GC content of 37.87%. It comprises a large single copy (LSC) region of 85,941 bp, a small single copy (SSC) region of 18,382 bp, and two inverted repeat regions (IRa and IRb) of 25,612 bp. Additionally, 158 functional genes in the genome were identified, including 105 protein-coding genes, eight ribosomal RNA genes, and 45 transfer RNA genes. Phylogenetic analysis revealed that <i>S. mochiquense</i> is grouped into a large clade with other <i>Solanum</i> species including cultivated potatoes (<i>S. tuberosum</i>). This study provides useful genomic information for future breeding and evolutionary studies of <i>S. mochiquense</i> and other <i>Solanum</i> species.
DOI: 10.6084/m9.figshare.27330922
title: The complete plastid genome of <i>Polygonatum gracile</i> P. Y. Li (Asparagaceae): characterization and phylogeny

description: <i>Polygonatum gracile</i> P. Y. Li is a perennial rhizomatous medicinal herb endemic to China with recognized medicinal value. Here, the first complete plastid genome of <i>P. gracile</i> is reported and characterized, and the phylogenetic relationships of <i>P. gracile</i> with other <i>Polygonatum</i> species are clarified by phylogenetic inferences based on complete plastid genome sequences. The complete plastid genome of <i>P. gracile</i> is 155,734 bp in length and exhibits the typical quadripartite circular structure consisting of a large single-copy (LSC, 84,385 bp) region, a small single-copy (SSC, 18,519 bp) region, and a pair of inverted repeat regions (IRa/b, 26,415 bp). A total of 112 unique genes, including 78 protein-coding genes, 30 tRNA genes, and four rRNA genes were identified. Seven protein-coding genes, eight tRNA genes, and four rRNA genes were duplicated in the IR regions. Phylogenetic reconstructions indicated that <i>P. gracile</i> belongs to sect. <i>Verticillata</i> and is most closely related to <i>P. zanlanscianense</i> Pamp. This study provides a basis for further phylogenetic reconstructions, conservation and utilization of <i>Polygonatum</i> species.
DOI: 10.6084/m9.figshare.27605536
title: The complete genome sequence of the chloroplast of <i>Bidens aurea</i>

description: <i>Bidens aurea</i> (Asteraceae), a native of tropical America is now widespread in Asia and the Americas. We explored the <i>B. aurea</i> chloroplast genome and conducted a phylogenetic analysis. The chloroplast genome was circular, consisting of a large single copy (LSC) of 83,909 base pairs (bp), a small single copy (SSC) of 18,407 bp, and two inverted repeat regions (IR) of 24,729 bp each. Phylogenetic analysis showed that the 19 <i>Bidens</i> taxa were divided into five major clades, and <i>B. aurea</i> was most closely related to two species. Our findings offer a high-quality B. aurea chloroplast genome, aiding DNA barcode development and evolutionary history reconstruction.
DOI: 10.6084/m9.figshare.27605536.v1
title: The complete genome sequence of the chloroplast of <i>Bidens aurea</i>

description: <i>Bidens aurea</i> (Asteraceae), a native of tropical America is now widespread in Asia and the Americas. We explored the <i>B. aurea</i> chloroplast genome and conducted a phylogenetic analysis. The chloroplast genome was circular, consisting of a large single copy (LSC) of 83,909 base pairs (bp), a small single copy (SSC) of 18,407 bp, and two inverted repeat regions (IR) of 24,729 bp each. Phylogenetic analysis showed that the 19 <i>Bidens</i> taxa were divided into five major clades, and <i>B. aurea</i> was most closely related to two species. Our findings offer a high-quality B. aurea chloroplast genome, aiding DNA barcode development and evolutionary history reconstruction.
DOI: 10.6084/m9.figshare.27879834.v1
title: Complete chloroplast genome sequence of <i>Solanum mochiquense</i>, one of the tuber-bearing potato relatives

description: <i>Solanum mochiquense</i> is one of the wild tuber-bearing <i>Solanum</i> species belonging to the Solanaceae family. In this study, the chloroplast genome sequence of the species was completed with Illumina sequencing technology. The total length of the chloroplast genome is 155,547 bp with a GC content of 37.87%. It comprises a large single copy (LSC) region of 85,941 bp, a small single copy (SSC) region of 18,382 bp, and two inverted repeat regions (IRa and IRb) of 25,612 bp. Additionally, 158 functional genes in the genome were identified, including 105 protein-coding genes, eight ribosomal RNA genes, and 45 transfer RNA genes. Phylogenetic analysis revealed that <i>S. mochiquense</i> is grouped into a large clade with other <i>Solanum</i> species including cultivated potatoes (<i>S. tuberosum</i>). This study provides useful genomic information for future breeding and evolutionary studies of <i>S. mochiquense</i> and other <i>Solanum</i> species.
DOI: 10.6084/m9.figshare.27330922.v2
title: The complete plastid genome of <i>Polygonatum gracile</i> P. Y. Li (Asparagaceae): characterization and phylogeny

description: <i>Polygonatum gracile</i> P. Y. Li is a perennial rhizomatous medicinal herb endemic to China with recognized medicinal value. Here, the first complete plastid genome of <i>P. gracile</i> is reported and characterized, and the phylogenetic relationships of <i>P. gracile</i> with other <i>Polygonatum</i> species are clarified by phylogenetic inferences based on complete plastid genome sequences. The complete plastid genome of <i>P. gracile</i> is 155,734 bp in length and exhibits the typical quadripartite circular structure consisting of a large single-copy (LSC, 84,385 bp) region, a small single-copy (SSC, 18,519 bp) region, and a pair of inverted repeat regions (IRa/b, 26,415 bp). A total of 112 unique genes, including 78 protein-coding genes, 30 tRNA genes, and four rRNA genes were identified. Seven protein-coding genes, eight tRNA genes, and four rRNA genes were duplicated in the IR regions. Phylogenetic reconstructions indicated that <i>P. gracile</i> belongs to sect. <i>Verticillata</i> and is most closely related to <i>P. zanlanscianense</i> Pamp. This study provides a basis for further phylogenetic reconstructions, conservation and utilization of <i>Polygonatum</i> species.
DOI: 10.6084/m9.figshare.27684803
title: Complete mitochondrial genome of the clearwing moth <i>Synanthedon bicingulata</i> (Lepidoptera: Sesiidae)

description: The clearwing moth, <i>Synanthedon bicingulata</i> Staudinger, 1887 (Lepidoptera: Sesiidae), is a serious pest that infests cherry trees. This species, which is distributed in South Korea, was once regarded as <i>S. hector</i> found in Japan, but renamed as <i>S. bicingulata</i> based on morphology. Molecular data for this species are not available. Hence, we sequenced the 16,255-bp long complete mitochondrial genome (mitogenome) of <i>S. bicingulata</i>. Phylogenetic analyses in the Cossoidea superfamily supported monophyly of the <i>Synanthedon</i> genus and Synanthedonini tribe. This newly sequenced mitogenome of <i>S. bicingulata</i> will be useful for studies in a diverse field of evolutionary study.
DOI: 10.6084/m9.figshare.27684803.v1
title: Complete mitochondrial genome of the clearwing moth <i>Synanthedon bicingulata</i> (Lepidoptera: Sesiidae)

description: The clearwing moth, <i>Synanthedon bicingulata</i> Staudinger, 1887 (Lepidoptera: Sesiidae), is a serious pest that infests cherry trees. This species, which is distributed in South Korea, was once regarded as <i>S. hector</i> found in Japan, but renamed as <i>S. bicingulata</i> based on morphology. Molecular data for this species are not available. Hence, we sequenced the 16,255-bp long complete mitochondrial genome (mitogenome) of <i>S. bicingulata</i>. Phylogenetic analyses in the Cossoidea superfamily supported monophyly of the <i>Synanthedon</i> genus and Synanthedonini tribe. This newly sequenced mitogenome of <i>S. bicingulata</i> will be useful for studies in a diverse field of evolutionary study.
DOI: 10.6084/m9.figshare.27890200.v1
title: The partial mitochondrial genome of <i>Semidalis anchoroides</i> Liu & Yang, 1993 (Neuroptera: Coniopterygidae)

description: <i>Semidalis anchoroides</i> Liu & Yang, 1993 is a small and common insect in southern China. It’s known for its small size, being covered by whitewax powder, and having uncomplicated venation. In this study, the mitochondrial genome for <i>S. anchoroides</i> was sequenced and analyzed. The sequenced partial mitogenome is 15,700 bp in length, encoding 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes, and one partial control region. These findings provide fundamental molecular data, thereby facilitating a more profound understanding of the phylogenetic relationships within the <i>Semidalis</i> species.
DOI: 10.6084/m9.figshare.27330922.v1
title: The complete plastid genome of <i>Polygonatum gracile</i> P. Y. Li (Asparagaceae): characterization and phylogeny

description: <i>Polygonatum gracile</i> P. Y. Li is a perennial rhizomatous medicinal herb endemic to China with recognized medicinal value. Here, the first complete plastid genome of <i>P. gracile</i> is reported and characterized, and the phylogenetic relationships of <i>P. gracile</i> with other <i>Polygonatum</i> species are clarified by phylogenetic inferences based on complete plastid genome sequences. The complete plastid genome of <i>P. gracile</i> is 155,734 bp in length and exhibits the typical quadripartite circular structure consisting of a large single-copy (LSC, 84,385 bp) region, a small single-copy (SSC, 18,519 bp) region, and a pair of inverted repeat regions (IRa/b, 26,415 bp). A total of 112 unique genes, including 78 protein-coding genes, 30 tRNA genes, and four rRNA genes were identified. Seven protein-coding genes, eight tRNA genes, and four rRNA genes were duplicated in the IR regions. Phylogenetic reconstructions indicated that <i>P. gracile</i> belongs to sect. <i>Verticillata</i> and is most closely related to <i>P. zanlanscianense</i> Pamp. This study provides a basis for further phylogenetic reconstructions, conservation and utilization of <i>Polygonatum</i> species.
DOI: 10.6084/m9.figshare.12840050
title: Datasets of NPP, soil radiocarbon and root biomass

description: The dataset is published with the following paper, please cite this paper when using the data, which is highly appreciated:Most root-derived carbon inputs do not contribute to long-term global soil carbon storage | Science China Earth SciencesWang, G., Xiao, L., Lin, Z. <i>et al.</i> Most root-derived carbon inputs do not contribute to long-term global soil carbon storage. <i>Sci. China Earth Sci.</i> <b>66</b>, 1072–1086 (2023). https://doi.org/10.1007/s11430-022-1031-5<br>There are three files and a reference list:<b>Supplementary Data</b>: The 54 studies from which the NPP<sub>data</sub> were derived (Reference_NPP Data.docx).code.7z: Code to perform the data analysis in R.<b>Output products.rar</b> : Generated digital maps of BNPP.<br>Please cite this paper when using the dataset, which is highly appreciated:<br>Most root-derived carbon inputs do not contribute to long-term global soil carbon storage | Science China Earth Sciences