cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11907249.v1
title: The Histoire ancienne jusqu'à César: Alignment (The Values of French)

description: <i>Alignment</i> maps the contents of a number of key manuscripts of the<i> Histoire ancienne jusqu'à César</i>, the earliest universal chronicle in French. The manuscripts are aligned to the paragraph division of the <i>Histoire ancienne</i> in Paris, Bibliothèque nationale de France, MS f. fr. 20125.<br><br>The latest version of the <i>Alignment</i> dataset can be visualised on<i>The Values of French </i>website: https://tvof.ac.uk/histoire-ancienne/alignment (available until 2030).<br><i>Alignment</i> is an output of the ERC-funded project <i>The Values of French Language and Literature in the European Middle Ages</i> (<i>TVOF</i>) (EU Horizon 2020, grant agreement no. 670726), directed by Prof. Simon Gaunt (PI) and hosted by the Department of French, King's College London. For more information, visit https://tvof.ac.uk/ (available until 2030).
DOI: 10.23641/asha.13425968
title: Developing strategies for speakers of African American English (Maher et al., 2021)

description: <b>Purpose: </b>Many studies have found a correlation between overall usage rates of nonmainstream forms and reading scores, but less is known about which dialect differences are most predictive. Here, we consider different methods of characterizing African American English use from existing assessments and examine which methods best predict literacy achievement.<b>Method: </b>Kindergarten and first-grade students who speak African American English received two assessments of dialect use and two assessments of decoding at the beginning and end of the school year. Item-level analyses of the dialect-use assessments were used to compute measures of dialect usage: (a) an overall feature rate measure based on the Diagnostic Evaluation of Language Variation–Screening Test, (b) a subscore analysis of the Diagnostic Evaluation of Language Variation–Screening Test based on items that pattern together, (c) an alternative assessment where children repeat and translate sentences, and (d) “repertoire” measures based on a categorical distinction of whether a child used a particular feature of mainstream American English.<b>Results:</b> Models using feature rate measures provided better data–model fit than those with repertoire measures, and baseline performance on a sentence repetition task was a positive predictor of reading score at the end of the school year. For phonological subscores, change from the beginning to end of the school year predicted reading at the end of the school year, whereas baseline scores were most predictive for grammatical subscores.<b>Conclusions:</b> The addition of a sentence imitation task is useful for understanding a child’s dialect and anticipating potential areas for support in early literacy. We observed some support for the idea that morphological dialect differences (i.e., irregular verb morphology) have a particularly close tie to later literacy, but future work will be necessary to confirm this finding.<br><b>Supplemental Material S1. </b>A summary table of fixed effects and lme4 model specification for each model reported in the text; models with factor score predictors are also included.<br><b>Supplemental Material S2. </b>Correlations between each pair of dialect measures at both baseline and post. <br>Maher, Z. K., Erskine, M. E., Byrd, A. S., Harring, J. R., & Edwards, J. R. (2021). African American English and Early Literacy: A Comparison of Approaches to Quantifying Nonmainstream Dialect.<i> Language, Speech, and Hearing Services in Schools, 52</i>(1), 118–130. https://doi.org/10.1044/2020_LSHSS-19-00115<br><b>Publisher Note:</b> This article is part of the Forum: Serving African American English Speakers in Schools Through Interprofessional Education & Practice.<br>
DOI: 10.23641/asha.13425968.v1
title: Developing strategies for speakers of African American English (Maher et al., 2021)

description: <b>Purpose: </b>Many studies have found a correlation between overall usage rates of nonmainstream forms and reading scores, but less is known about which dialect differences are most predictive. Here, we consider different methods of characterizing African American English use from existing assessments and examine which methods best predict literacy achievement.<b>Method: </b>Kindergarten and first-grade students who speak African American English received two assessments of dialect use and two assessments of decoding at the beginning and end of the school year. Item-level analyses of the dialect-use assessments were used to compute measures of dialect usage: (a) an overall feature rate measure based on the Diagnostic Evaluation of Language Variation–Screening Test, (b) a subscore analysis of the Diagnostic Evaluation of Language Variation–Screening Test based on items that pattern together, (c) an alternative assessment where children repeat and translate sentences, and (d) “repertoire” measures based on a categorical distinction of whether a child used a particular feature of mainstream American English.<b>Results:</b> Models using feature rate measures provided better data–model fit than those with repertoire measures, and baseline performance on a sentence repetition task was a positive predictor of reading score at the end of the school year. For phonological subscores, change from the beginning to end of the school year predicted reading at the end of the school year, whereas baseline scores were most predictive for grammatical subscores.<b>Conclusions:</b> The addition of a sentence imitation task is useful for understanding a child’s dialect and anticipating potential areas for support in early literacy. We observed some support for the idea that morphological dialect differences (i.e., irregular verb morphology) have a particularly close tie to later literacy, but future work will be necessary to confirm this finding.<br><b>Supplemental Material S1. </b>A summary table of fixed effects and lme4 model specification for each model reported in the text; models with factor score predictors are also included.<br><b>Supplemental Material S2. </b>Correlations between each pair of dialect measures at both baseline and post. <br>Maher, Z. K., Erskine, M. E., Byrd, A. S., Harring, J. R., & Edwards, J. R. (2021). African American English and Early Literacy: A Comparison of Approaches to Quantifying Nonmainstream Dialect.<i> Language, Speech, and Hearing Services in Schools, 52</i>(1), 118–130. https://doi.org/10.1044/2020_LSHSS-19-00115<br><b>Publisher Note:</b> This article is part of the Forum: Serving African American English Speakers in Schools Through Interprofessional Education & Practice.<br>
DOI: 10.15468/27twqq
title: A new species Cyrtodactytlus Gray (Squamata: Gekkonidae) from western Thailand and the phylogenetic placement of C. inthanon and C. doisuthep

description: This dataset contains the digitized treatments in Plazi based on the original journal article Chomdej, Siriwadee, Suwannapoom, Chatmongkon, Pawangkhanant, Parinya, Pradit, Waranee, Nazarov, Roman A., Grismer, L. Lee, Poyarkov, Nikolay A. (2020): A new species Cyrtodactytlus Gray (Squamata: Gekkonidae) from western Thailand and the phylogenetic placement of C. inthanon and C. doisuthep. Zootaxa 4838 (2): 179-209, DOI: https://doi.org/10.11646/zootaxa.4838.2.2
DOI: 10.6084/m9.figshare.13012664
title: Proposal for safety walk-round education to develop risk prediction skills in clinically inexperienced novice health professional students

description: This data is the result of students performing Safety walk rounds.
DOI: 10.6084/m9.figshare.13012664.v3
title: Proposal for safety walk-round education to develop risk prediction skills in clinically inexperienced novice health professional students

description: This data is the result of students performing Safety walk rounds.
DOI: 10.6084/m9.figshare.13012664.v2
title: Proposal for safety walk-round education to develop risk prediction skills in clinically inexperienced medical students

description: This data is the result of students performing Safety walk rounds.
DOI: 10.5281/zenodo.4451346
title: Pockets of Open Cells database

description: Database of Pockets of Open Cells (POCs) detected in MODIS Terra imagery using the machine learning algorithm here: https://zenodo.org/record/4381994. Includes segemented masks and basic physical properties such as size and area.
DOI: 10.5281/zenodo.4451345
title: Pockets of Open Cells database

description: Database of Pockets of Open Cells (POCs) detected in MODIS Terra imagery using the machine learning algorithm here: https://zenodo.org/record/4381994. Includes segemented masks and basic physical properties such as size and area.
DOI: 10.6073/pasta/5914dbf5389e1b4071a8a530e1b05a7c
title: OMS01 Microbial and soil data in the Belowground Plot Experiment at konza prairie since 2017

description: Data describe the soil chemistry and microbial diversity at the Belowground Plot Experiment (BGP) from the 2017 summer growing season. Whole plot-scale nitrogen fertilization at the BGP ceased in 2017. Four subplots within each historically fertilized plot were established to continue the annual fertilization treatment for soil chemistry and microbial diversity.
DOI: 10.6084/m9.figshare.13567940
title: Extended Data Tables for "Induction of interferon signaling and allograft inflammatory factor 1 in macrophages in a mouse model of breast cancer metastases"

description: 1. Extended Data Table 1: Fragments per kilobase of transcript per million mapped reads (FPKM) values of MAMs and RAMs.2. Extended Data Table 2: Differentially expressed genes as identified using DEseq2.3. Extended Data Table 3: Highly differentially expressed genes for IPA analysis4. Extended Data Table 4: Gene Ontology annotation of the highly differentially expressed genes.5. Extended Data Table 5: Canonical Pathways in IPA enriched by the differentially expressed genes in MAMs.<br>
DOI: 10.6084/m9.figshare.13567940.v1
title: Extended Data Tables for "Induction of interferon signaling and allograft inflammatory factor 1 in macrophages in a mouse model of breast cancer metastases"

description: 1. Extended Data Table 1: Fragments per kilobase of transcript per million mapped reads (FPKM) values of MAMs and RAMs.2. Extended Data Table 2: Differentially expressed genes as identified using DEseq2.3. Extended Data Table 3: Highly differentially expressed genes for IPA analysis4. Extended Data Table 4: Gene Ontology annotation of the highly differentially expressed genes.5. Extended Data Table 5: Canonical Pathways in IPA enriched by the differentially expressed genes in MAMs.<br>
DOI: 10.5281/zenodo.4451358
title: Galaxy spins

description: Data for "An observed correlation between galaxy spins and initial conditions", Nature Astronomy (2020), https://arxiv.org/abs/2003.04800 Added version 2 - Corrected errors in MaNGA and SAMI measurements
DOI: 10.5281/zenodo.4075532
title: Galaxy spins

description: Data for "An observed correlation between galaxy spins and initial conditions", Nature Astronomy (2020), https://arxiv.org/abs/2003.04800 Added version 2 - Corrected errors in MaNGA and SAMI measurements
DOI: 10.6084/m9.figshare.13611338
title: Exoskeleton participant timeline diagram

description: Time schedule of enrolment, interventions, assessments, and visits for participants
DOI: 10.6084/m9.figshare.13611338.v1
title: Exoskeleton participant timeline diagram

description: Time schedule of enrolment, interventions, assessments, and visits for participants
DOI: 10.25919/d0cd-dp23
title: Parkes observations for project P1087 semester 2020OCTS_01

description: The detection of gamma-ray emission from the SNR/PWN B0453?685 could help us understand this system, especially if we know whether that emission is likely to arise from the PWN, the SNR, or the embedded pulsar. No pulsations have been detected from the central X-ray source that is almost certainly the neutron star birthed in the supernova, but the expected pulsed flux density is a factor of 3 or more below existing surveys. We propose deep observations that should detect pulsations if the source is analogous to other young SNR/PWN complexes. Knowing the pulsar energetics is key to understanding the current state and evolutionary history of the system, which in turn will increase our knowledge of star formation in the LMC, where only five PWNe are known to date.
DOI: 10.25919/ywcz-9c29
title: Parkes observations for project P737 semester 2020OCTS_02

description: The aim of this proposal is to carry out tests of the new backend instruments which cannot be carried out during standard maintenance periods. The scheduled time is used to measure beam shapes, determine polarisation calibration solutions and commission the National Facility observing modes for the new wide-band receiver.
DOI: 10.25919/me4g-x238
title: Parkes observations for project PX500 semester 2020OCTS_01

description: This proposal relates to time purchased by the Chinese Academy of Sciences for Parkes follow-up confirmation and timing of FAST discoveries. As the observing time has been purchased this proposal (and the related PX501) does not require TAC grading. The primary reason for submitting a proposal is to ensure an outreach statement and that the proposal is entered into OPAL for the data archive to access. The Chinese team have two time requests. The time scheduled for the first, relating to this proposal, will be allocated in blocks of 24 hours and the data will become available in the data archive with an 18 month embargo period. The second type of time will be scheduled in shorter blocks and the data archived with a 10 year embargo.
DOI: 10.25919/qj9p-ar70
title: Parkes observations for project P1038 semester 2020OCTS_05

description: PSR~J1759-2402 is one of a small handful of pulsars which are in orbit about high mass stars. Its orbital period is 8.3 years and the orbit is highly eccentric with periastron expected in 2021 March. Although discovered at Parkes, the Lovell telescope has been monitoring the pulsar over many years. However, it’s restricted bandwidth, maintenance schedule and poorer polarization capability make it unsuitable to follow the pulsar as it enters and leaves the eclipse by the companion. In contrast, the UWL on Parkes with its wide- band and excellent polarization characteristics means that we can determine scattering, polarization, dispersion measure and rotation measure changes as the pulsar enters its companion wind. We request a continuation of our weekly observations of the pulsar to track its progress around the orbit.
DOI: 10.25919/02zs-tw53
title: Parkes observations for project P885 semester 2020OCTS_07

description: We propose to continue observing the magnetars 1E 1547.0?5408 and PSR J1622?4950 weekly, to track their rotation, flux density, and polarisation. The revolutionary UWL capabilities promise new opportunities to disentangle still mysterious radio emission mechanisms in magnetars. This promise is supported by the recent follow up of XTE J1810?197, again a radio magnetar after 10 years dormant, and of the hot-off-the-press magnetar Swift J1818.0?1607, for which our observations with the UWL receiver are providing unique and tantalizing measurements of radio spectrum and polarisation.
DOI: 10.25919/zs23-3w54
title: Parkes observations for project P1050 semester 2020OCTS_06

description: This is a request for observing time for the timing campaign of new pulsar discoveries and follow-up of expected new potential pulsars from the re-processing of the low-latitude Galactic plane section of the HTRU survey (P630). We have now completed the first pass re-processing of the 62 % of the survey with GPU based coherent acceleration search and template bank search pipelines, and have discovered 51 previously unknown pulsars. Interesting science can usually only be derived from a new pulsar after confirmation and a follow-up timing campaign is carried out. One year of initial timing is the minimum timespan required to fully characterise any newly-discovered pulsars, essential for deriving pulsar parameters such as the characteristic age, magnetic field strength, spin-down rate, as well as to detect any unexpected behaviour of the pulsar which might result from emission instabilities. This timing project is necessary for following up on any interesting pulsar systems discovered from the HTRU Galactic plane survey. Since all of the pulsars on the observing list here have been confirmed in the current 2020APRS semester, the follow-up timing will produce completely new and exciting results. In addition, this timing project will enable a large-scale examination of the Galactic plane pulsar population, exploring the true boundaries of pulsar parameter space in the galactic plane.
DOI: 10.25919/ymjb-sw19
title: Parkes observations for project P1041 semester 2020OCTS_02

description: We propose to start a long-term timing campaign of millisecond pulsars (MSPs) discovered in the Globular Cluster Omega Centauri. So far, we have discovered seven MSPs and obtained coherent timing solutions for five of them. Monthly observations with the Parkes Ultra-Wideband Low (UWL) receiver system are requested to time known pulsars and search for new pulsars. Long-term timing and polarisation observations of these MSPs will provide us a new way to (1) study the dynamics of the core and constrain the existence of any intermediate-mass black holes; (2) reveal the origin of Gamma-ray emission from the core and put stringent constraints on dark matter parameters; (3) study the ionised medium and magnetic fields in the cluster core.
DOI: 10.25678/0002tg
title: Data for: Reichert et al. 2020 Potential and Challenges of Investigating Intrinsic Uncertainty of Hydrological Models with Stochastic, Time-Dependent Parameters

description: Stochastic hydrological process models have two conceptual advantages over deterministic models. First, even though water flow in a well-defined environment is governed by deterministic differential equations, a hydrological system, at the level we can observe it, does not behave deterministically. Reasons for this behavior are unobserved spatial heterogeneity and fluctuations of input, unobserved influence factors, heterogeneity and variability in soil and aquifer properties, and an imprecisely known initial state. A stochastic model provides thus a more realistic description of the system than a deterministic model. Second, hydrological models simplify real processes. The resulting structural deficits can better be accounted for by stochastic than by deterministic models because they, even for given parameters and input, allow for a probability distribution of different system evolutions rather than a single trajectory. On the other hand, stochastic process models are more susceptible to identifiability problems and Bayesian inference is computationally much more demanding. In this paper, we review the use of stochastic, time-dependent parameters to make deterministic models stochastic, discuss options for the numerical implementation of Bayesian inference, and investigate the potential and challenges of this approach with a case study. We demonstrate how model deficits can be identified and reduced, and how the suggested approach leads to a more realistic description of the uncertainty of internal and output variables of the model compared to a deterministic model. In addition, multiple stochastic parameters with different correlation times could explain the variability in the time scale of output error fluctuations identified in an earlier study.
DOI: 10.15131/shef.data.12058110
title: TDP43 proteinopathy is associated with aberrant DNA methylation in human Amyotrophic Lateral Sclerosis

description: DNA methylation generated by Illumina EPIC microarray analysis of samples collected by laser capture microdissection from human spinal cord motor neurons.
DOI: 10.15131/shef.data.12058110.v1
title: TDP43 proteinopathy is associated with aberrant DNA methylation in human Amyotrophic Lateral Sclerosis

description: DNA methylation generated by Illumina EPIC microarray analysis of samples collected by laser capture microdissection from human spinal cord motor neurons.
DOI: 10.15131/shef.data.10049825.v1
title: Data and figures related to publication: Improved ambient stability of thermally annealed Zinc Nitride thin films

description: Zinc nitride films are known to readily oxidize in an ambient atmosphere, forming a ZnO/Zn(OH)2 medium. We report that post-growth thermal annealing significantly improves the stability of zinc nitride with a three-order magnitude increase in degradation time from a few days in un-annealed films to several years after annealing. A degradation study was performed on samples annealed under a flow of nitrogen at 200–400 °C, which showed that the stability of the films depends strongly on the annealing temperature. We propose a mechanism for this improvement, which involves a stabilization of the native oxide layer that forms on the surface of zinc nitride films after exposure to ambient conditions. The result holds significant promise for the use of zinc nitride in devices where operational stability is a critical factor in applications.<br><br>The study reported in this paper was funded by the EPSRC (Fund code EP/M507611/1) and Johson Matthey PLC. The financial support by these parties is highly appreciated.<br><br>The data required to reproduce each figure panel is provided in different text files. Columns are separated by a space character. The first line in each column describes the dataset. The complete figures are also included as .tif files.<br><br>With the added context of the paper, it should be easy to reproduce the figures.<br><br><b>Figure 1:</b> Transmittance spectra of (a) an as-deposited and (b) an annealed 700 nm Zn<sub>3</sub>N<sub>2</sub> film for up to 18 weeks. (c) Scanning Electron Microscopy image of a partially oxidised Zn<sub>3</sub>N<sub>2</sub> film.<br><b><br>Figure 2:</b> (a) Refractive index, n, and (b) extinction coefficient, k, of the Zn<sub>3</sub>n<sub>2</sub> layer obtained by spectroscopic ellipsometry for different annealing temperatures.<br><br><b>Figure 3:</b> Thickness of (a) the Zn<sub>3</sub>N<sub>2</sub> layer and (b) oxide layers over several months for annealed samples. (c) Lifetime of the Zn<sub>3</sub>N<sub>2</sub> layer as a function of annealing temperature. The data points marked with * were extrapolated based on the oxidation rates measured in this study.<br><br><b>Figure 4:</b> X-ray diffraction scans of the (400) peak for Zn<sub>3</sub>N<sub>2</sub> samples annealed at different temperatures. The dashed line shows the expected position of the (400) peak based on crystallographic data.<br><br><br>
DOI: 10.15131/shef.data.7212158
title: Data for the paper "Investigating the mechanical response of paediatric bone under bending and torsion using finite element analysis"

description: Complete results set of the study reported in "Investigating the mechanical response of paediatric bone under<br>bending and torsion using finite element analysis" by Zainab Altai, Marco Viceconti, Amaka C. Offiah, and Xinshan Li, https://doi.org/10.1007/s10237-018-1008-9 <br>
DOI: 10.15131/shef.data.7212158.v1
title: Data for the paper "Investigating the mechanical response of paediatric bone under bending and torsion using finite element analysis"

description: Complete results set of the study reported in "Investigating the mechanical response of paediatric bone under<br>bending and torsion using finite element analysis" by Zainab Altai, Marco Viceconti, Amaka C. Offiah, and Xinshan Li, https://doi.org/10.1007/s10237-018-1008-9 <br>
DOI: 10.15131/shef.data.5901364
title: Data for the paper "The effect of boundary constraints on patient classification using finite element predicted risk of fracture "

description: Complete results set of the study reported in "Anteriolateral falls are important as posteriolateral falls while classify patients under their risk of fracture" by Zainab Altai, Muhammad Qasim, Xinshan Li, and Marco Viceconti