cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.tstazb
title: Occurrence Download

description: A dataset containing 215 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus sibirica Du Tour"
 ]
}

 The dataset includes 215 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004753-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zp8q35
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dasycaris symbiotes Kemp, 1922"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053964-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v1xmfp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "InstitutionCode is Staffordshire Ecological Record",
 "TaxonKey is Plantae",
 "HasCoordinate is TRUE",
 {
 "or" : [
 "Country is Albania",
 "Country is Austria",
 "Country is Bosnia and Herzegovina",
 "Country is Belgium",
 "Country is Bulgaria",
 "Country is Belarus",
 "Country is Switzerland",
 "Country is Cyprus",
 "Country is Czechia",
 "Country is Germany",
 "Country is Denmark",
 "Country is Estonia",
 "Country is Spain",
 "Country is Finland",
 "Country is France",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Country is Greece",
 "Country is Croatia",
 "Country is Hungary",
 "Country is Ireland",
 "Country is Iceland",
 "Country is Italy",
 "Country is Lithuania",
 "Country is Luxembourg",
 "Country is Latvia",
 "Country is Moldova, Republic of",
 "Country is Montenegro",
 "Country is Malta",
 "Country is North Macedonia",
 "Country is Netherlands",
 "Country is Norway",
 "Country is Poland",
 "Country is Portugal",
 "Country is Romania",
 "Country is Serbia",
 "Country is Russian Federation",
 "Country is Sweden",
 "Country is Slovenia",
 "Country is Slovakia",
 "Country is Ukraine"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009938-181108115102211/datasets/export for details.
DOI: 10.15468/dl.qeutwz
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is Oregon Bee Atlas Survey Data: 2018",
 "TaxonKey is Diadasia diminuta (Cresson, 1879)"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159165-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r5n4tm
title: Occurrence Download

description: A dataset containing 663 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tachigali guianensis (Benth.) Zarucchi & Herend."
 ]
}

 The dataset includes 663 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0337949-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uooczs
title: Occurrence Download

description: A dataset containing 30598 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amaurornis flavirostra (Swainson, 1837)",
 "Country is South Africa"
 ]
}

 The dataset includes 30598 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004753-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.emxt4b
title: Occurrence Download

description: A dataset containing 273598 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trifolium dubium Sibth."
 ]
}

 The dataset includes 273598 records from 867 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0337969-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.stpg63
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyphostemma sarcospathulum (Chiov.) Desc."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159179-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqm3hv
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pilea botterii Killip"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004753-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trpwv0
title: Occurrence Download

description: A dataset containing 1142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setaria grisebachii E.Fourn.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 1142 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000373-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dyk8j6
title: Occurrence Download

description: A dataset containing 425 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyphostemma adenopodum (Sprague) Desc."
 ]
}

 The dataset includes 425 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159167-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhzass
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Primula smithiana Craib"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004753-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y3vflh
title: Occurrence Download

description: A dataset containing 6200 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ninia sebae (Duméril, Bibron & Duméril, 1854)"
 ]
}

 The dataset includes 6200 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000373-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6jxmyk
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Barkeria vanneriana Rchb.f."
 ]
}

 The dataset includes 19 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004753-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.urruqz
title: Occurrence Download

description: A dataset containing 14189 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cassytha filiformis L."
 ]
}

 The dataset includes 14189 records from 397 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159203-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s6y4w9
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tachigali tessmannii Harms"
 ]
}

 The dataset includes 45 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0337958-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejleeu
title: Occurrence Download

description: A dataset containing 1649 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Meinertellidae",
 "TaxonKey is Blattidae"
 ]
 },
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1649 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004754-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.neab4b
title: Occurrence Download

description: A dataset containing 133028 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Monasa"
 ]
}

 The dataset includes 133028 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021640-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17605/osf.io/jwcf5
title: Usability of Confidentiality-Preserving Security Assurance

description: The project investigates the usability aspects of Confidentiality-Preserving Security Assurance UI Mock-Ups varied across the conditions Specialist/Layman Terms and Results Demonstrability.
DOI: 10.17605/osf.io/6nht5
title: Usability of Confidentiality-Preserving Security Assurance

description: The project investigates the usability aspects of Confidentiality-Preserving Security Assurance UI Mock-Ups varied across the conditions Specialist/Layman Terms and Results Demonstrability.
DOI: 10.5281/zenodo.17786078
title: COVID-19-Hospitalisierungen in Deutschland

description: Im Datensatz "COVID-19-Hospitalisierungen in Deutschland" des Robert Koch-Institutswerden täglich aktualisierte Informationen zu Hospitalisierungen im Zusammenhang mit COVID-19 basierend auf den Meldungen nach dem Infektionsschutzgesetz (IfSG) bereitgestellt. Neben tagesaktuellen Fallzahlen und Inzidenzen auf Bundes- und Länderebene enthält der Datensatz auch modellgestützte Schätzungen verzögert gemeldeter Hospitalisierungen mittels Nowcasting. Ziel ist es, die tatsächliche Belastung des Gesundheitssystems durch COVID-19 besser abzubilden, insbesondere durch die Berechnung adjustierter 7-Tage-Hospitalisierungsinzidenzen.
DOI: 10.5281/zenodo.17786076
title: QUYMICH NERVINING (N. ISCHIADICUS) POSTTRAVMATIK SHIKASTLANISHIDA MIKROJARROHLIK ARALASHUVINING SAMARADORLIGI: KLINIK NATIJALAR ASOSIDA TAHLIL
DOI: 10.5281/zenodo.17786077
title: QUYMICH NERVINING (N. ISCHIADICUS) POSTTRAVMATIK SHIKASTLANISHIDA MIKROJARROHLIK ARALASHUVINING SAMARADORLIGI: KLINIK NATIJALAR ASOSIDA TAHLIL
DOI: 10.21227/5z73-h449
title: "Topographically-Aware Optimization of the CASA Model for High-Resolution NPP Estimation in Mountain\u2013Plain Transition Zones"

description: "The accurate quantification of terrestrial net primary productivity (NPP) is critical for understanding the global carbon cycle. While the Carnegie\u2013Ames\u2013Stanford Approach (CASA) model is widely used for this purpose, its application in complex terrain is often hampered by conventional parameterizations that overlook the critical modulating effects of terrain-induced illumination and phenological dynamics. This oversight leads to systematic biases, including an overestimation of NPP in plains and an underestimation in mountainous regions. To address this, we propose a refined CASA framework that synergistically optimizes three core components. First, we generate high-fidelity, monthly 30-meter NDVI\/kNDVI time series using a Gaussian Filter\u2013Savitzky\u2013Golay (GF\u2013SG) fusion algorithm to enhance the derivation of the fraction of absorbed photosynthetically active radiation (FPAR). Second, we recalibrate the temperature stress factor () by introducing a novel phenological optimum temperature () derived from the Phenofit model. Third, we refine the maximum light-use efficiency () by incorporating a slope\u2013aspect illumination coefficient, F(s,a), to account for topographic shading. In a case study of Mianzhu City, China, a pronounced mountain\u2013plain transition zone, our evaluation of six progressive CASA schemes demonstrates that the GF\u2013SG fusion outperforms the Enhanced Spatial and Temporal Adaptive Reflectance Fusion Model (ESTARFM), achieving a higher correlation with Landsat NDVI (0.74 vs. 0.65). The comprehensive optimization scheme (CASA_5) achieved the highest accuracy (R\u00b2 = 0.70), effectively mitigating the classic topographic biases and more faithfully reproducing NPP\u2019s interannual variability, seasonal dynamics, and spatial gradients. Applied from 2000 to 2020, the model reveals a post-2008 earthquake \u201cdegradation\u2013recovery\u2013enhancement\u201d trajectory, identifying forests and cultivated vegetation as primary carbon sinks. This topographically-aware framework provides a robust tool for monitoring carbon fluxes in complex landscapes and offers critical support for ecological assessment and carbon budgeting."
DOI: 10.6084/m9.figshare.28189616.v1
title: Supplementary data for Reliable inference of phylogenomic relationship via assembly-based strategy accommodating raw reads and proteins

description: Phylogenomics has emerged as a transformative approach in systematics, conservation biology, and biomedicine, enabling the inference of evolutionary relationships by leveraging hundreds to thousands of genes from genomic or transcriptomic data. However, acquiring high-quality genomes and transcriptomes necessitates samples with intact DNA and RNA, substantial sequencing investments, and extensive bioinformatic processing, such as genome/transcriptome assembly and annotation. This challenge is particularly pronounced for rare or difficult-to-collect species, such as those inhabiting the deep sea, where only fragmented DNA reads are often available due to environmental degradation or suboptimal preservation conditions. To address these limitations, we introduce VEHoP (Versatile, Easy-to-use Homology-based Phylogenomic pipeline), a tool designed to infer protein-coding regions from diverse inputs, including raw reads (NGS and TGS), draft genomes, transcriptomes, and annotated genomes. VEHoP automates the generation of orthologous sequence alignments, concatenated matrices, and phylogenetic trees, streamlining phylogenomic analyses for researchers across disciplines. The tool aims to (1) expand taxonomic sampling by accommodating a wide range of input data types and (2) simplify phylogenomic workflows, making them accessible to researchers with varying levels of bioinformatic expertise. We evaluated VEHoP's performance using datasets from oysters, catfish, and insects, demonstrating its ability to produce robust phylogenetic trees with strong bootstrap support, outperforming assembly-free methods. Additionally, we applied VEHoP to reconstruct the phylogeny of the enigmatic deep-sea gastropod order Neomphalida, successfully resolving a well-supported phylogenetic backbone for this poorly understood group. VEHoP is freely available on GitHub (https://github.com/ylify/VEHoP), with dependencies easily installable via Bioconda.
DOI: 10.5281/zenodo.17786074
title: Geomorphic zoning data of Motuo County

description: Geomorphic zoning data of Motuo County
DOI: 10.5281/zenodo.17786075
title: Geomorphic zoning data of Motuo County

description: Geomorphic zoning data of Motuo County
DOI: 10.34740/kaggle/dsv/13954420
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.82u9bh
title: Occurrence Download

description: A dataset containing 149398 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tursiops truncatus",
 "Year is greater than or equal to 1960",
 "Year is less than or equal to 2025",
 "Geometry POLYGON ((-97.8598 -83.0205, 68.5 -83.0205, 68.5 90, -97.8598 90, -97.8598 -83.0205))"
 ]
}

 The dataset includes 149398 records from 668 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021647-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9q39v9
title: Occurrence Download

description: A dataset containing 865606 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "TaxonKey is Cyanistes caeruleus",
 "Year 2020-2025"
 ]
}

 The dataset includes 865606 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021649-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17785916
title: Data for: Divergent venoms among two closely related co-distributed centipede species, Scolopendra morsitans and S. hardwickei in tropical Asia

description: Folder name: Data_MS_upload

 








Name of subfolder



Description









R_codes





Contains the R codes for the matrices and all  the analyses performed. 









PD_result





Contains the Proteome Discoverer result files. It has two subfolders in it. The Excel file folder contains the result proteins for each individual in an excel format while the FASTA file folder contains the result proteome FASTA files for each individual.









Miscellaneous_excel_files





Contains GPS locations data and the matrix generated from the result FASTA files









in_silico_50AA_proteome_files





Contains the reference proteome files generated from the individual venom gland transcriptomes for both the species









FASTQC_reports





Contains the FASTQC report files. It has two subfolders. The Before trimming folder contains the FASTQC report html files for each individual before trimming, and the After trimming folder contains the FASTQC report html files for each individual after trimming.
DOI: 10.5281/zenodo.17785917
title: Data for: Divergent venoms among two closely related co-distributed centipede species, Scolopendra morsitans and S. hardwickei in tropical Asia

description: Folder name: Data_MS_upload

 








Name of subfolder



Description









R_codes





Contains the R codes for the matrices and all  the analyses performed. 









PD_result





Contains the Proteome Discoverer result files. It has two subfolders in it. The Excel file folder contains the result proteins for each individual in an excel format while the FASTA file folder contains the result proteome FASTA files for each individual.









Miscellaneous_excel_files





Contains GPS locations data and the matrix generated from the result FASTA files









in_silico_50AA_proteome_files





Contains the reference proteome files generated from the individual venom gland transcriptomes for both the species









FASTQC_reports





Contains the FASTQC report files. It has two subfolders. The Before trimming folder contains the FASTQC report html files for each individual before trimming, and the After trimming folder contains the FASTQC report html files for each individual after trimming.
DOI: 10.15468/dl.wgpeg2
title: Occurrence Download

description: A dataset containing 537 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Monochamus saltuarius"
 ]
}

 The dataset includes 537 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021672-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ke5qdv
title: Occurrence Download

description: A dataset containing 4532 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Diabelia serrata, Diabelia spathulata, Abies beshanzuensis, Abies chensiensis, Abies delavayi)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4532 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021676-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4w8mgt
title: Occurrence Download

description: A dataset containing 2935126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Türkiye",
 "OccurrenceStatus is Present",
 "Year 2015-2025"
 ]
}

 The dataset includes 2935126 records from 397 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021651-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbfhet
title: Occurrence Download

description: A dataset containing 45125 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-980.0",
 "Geometry POLYGON((-127.09428 23.53964,-58.00885 23.53964,-58.00885 55.94787,-127.09428 55.94787,-127.09428 23.53964))",
 "TaxonKey is Rhamnus cathartica"
 ]
}

 The dataset includes 45125 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021675-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.