cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.tyt5s8
title: Occurrence Download

description: A dataset containing 2955 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Aphanamixis polystachya (Wall.) R.Parker"
 ]
}

 The dataset includes 2955 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024524-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15012693
title: Untersuchungen zum Wandel hallstattzeitlicher Bestattungssitten in Süd- und Südwestdeutschland
title: Recovered and reorganised in two SQLite databases.

description: Data collected and published by Nils Müller-Scheeßel (2006, 2013).Recovered and reorganised in two SQLite databases by Christoph Rinne.

The data published here is taken from the work ‘Untersuchungen zum Wandel hallstattzeitlicher Bestattungssitten in Süd- und Südwestdeutschland’, published in 2013 as volume 138 of the series ‘Universitätsforschungen zur Prähistorischen Archäologie’ by R. Habelt, Bonn. This work was dedicated to the task of investigating the changes in Hallstatt burial customs in Baden-Württemberg and Bavaria, taking into account comparative cultural considerations.

Müller-Scheeßel 2006: N. Müller-Scheeßel, Untersuchungen zum Wandel hallstattzeitlicher Bestattungssitten in Süd- und Südwestdeutschland (Datenbank) (Eberhard Karls Universität 2006). http://hdl.handle.net/10900/47101 (Zugriff: 19.10.2023).

Müller-Scheeßel 2013: N. Müller-Scheeßel, Untersuchungen zum Wandel hallstattzeitlicher Bestattungssitten in Süd- und Südwestdeutschland. Universitätsforschungen zur prähistorischen Archäologie 245 (Bonn 2013).

The data is provided as SQLite database for direct use. In addition, we provide the data as a file with SQL statements (UTF-8) creating the database schema and inserting the data (dump). These SQL statements should be executable as far as possible in any SQL system and restore the database there. In addition to this data, detailed documentation (RMD, HTML) is also included in the zip archive. Each database provides two additional tables: readme and metadata.
DOI: 10.5281/zenodo.15012694
title: Untersuchungen zum Wandel hallstattzeitlicher Bestattungssitten in Süd- und Südwestdeutschland
title: Recovered and reorganised in two SQLite databases.

description: Data collected and published by Nils Müller-Scheeßel (2006, 2013).Recovered and reorganised in two SQLite databases by Christoph Rinne.

The data published here is taken from the work ‘Untersuchungen zum Wandel hallstattzeitlicher Bestattungssitten in Süd- und Südwestdeutschland’, published in 2013 as volume 138 of the series ‘Universitätsforschungen zur Prähistorischen Archäologie’ by R. Habelt, Bonn. This work was dedicated to the task of investigating the changes in Hallstatt burial customs in Baden-Württemberg and Bavaria, taking into account comparative cultural considerations.

Müller-Scheeßel 2006: N. Müller-Scheeßel, Untersuchungen zum Wandel hallstattzeitlicher Bestattungssitten in Süd- und Südwestdeutschland (Datenbank) (Eberhard Karls Universität 2006). http://hdl.handle.net/10900/47101 (Zugriff: 19.10.2023).

Müller-Scheeßel 2013: N. Müller-Scheeßel, Untersuchungen zum Wandel hallstattzeitlicher Bestattungssitten in Süd- und Südwestdeutschland. Universitätsforschungen zur prähistorischen Archäologie 245 (Bonn 2013).

The data is provided as SQLite database for direct use. In addition, we provide the data as a file with SQL statements (UTF-8) creating the database schema and inserting the data (dump). These SQL statements should be executable as far as possible in any SQL system and restore the database there. In addition to this data, detailed documentation (RMD, HTML) is also included in the zip archive. Each database provides two additional tables: readme and metadata.
DOI: 10.15468/dl.8haz9v
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Trichechus manatus Linnaeus, 1758",
 "Year 1899-2025"
 ]
}

 The dataset includes 133 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024525-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/11147135
title: Visual Scene Instructions for Generative LLMs
DOI: 10.15468/dl.qccnav
title: Occurrence Download

description: A dataset containing 18106 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is T.B. Lee Herbarium Vascular Plant Collection"
 ]
}

 The dataset includes 18106 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024528-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qy2xf7
title: Occurrence Download

description: A dataset containing 332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ceanothus parvifolius (S.Watson) Trel., Ceanothus parvifolius (S.Watson) Rose, Ceanothus parvifolius J.M.Coult.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 332 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024529-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tc4kmj
title: Occurrence Download

description: A dataset containing 250 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Specimens recorded during the HHUMLT24 cruise on RV Helmer Hanssen Longyearbyen – Tromsø, July 3–10, 2024"
 ]
}

 The dataset includes 250 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024532-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jd7bmy
title: Occurrence Download

description: A dataset containing 4374 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ceanothus thyrsiflorus Eschw.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4374 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024534-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.75uz5c
title: Occurrence Download

description: A dataset containing 345 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "TaxonKey is Xiphophorus hellerii Heckel, 1848"
 ]
}

 The dataset includes 345 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024535-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13352486
title: Datasets for AGIMA-Score modeling

description: This data repositary includes the following datasets.

(1) 'rs.zip' -- It is a secondary dataset that originates from the Refined Set in PDBbind database (version V2020). When training models like AGIMA-Score, the complexes in the validation/test sets need to be removed. 

(2) 'cs.zip' -- It is a secondary dataset that originates from the Core Set (CASF-2016) in PDBbind database (version V2020). It was used as the validation set (for parameter tuning) when building the AGIMA-Score models.

(3) 'test1.zip' -- It is a secondary dataset that originates from CSAR-HiQ1. It was used as the Test1 set for evaluating the AGIMA-Score models.

(4) 'test2.zip' -- It is a secondary dataset that originates from CSAR-HiQ2. It was used as the Test2 set for evaluating the AGIMA-Score models.

(5) 'indexes.zip' -- It includes the labels (binding affinity data) for the complexes in above (1)~(4) sets.

A file 'xxxx_atm_prop.txt' indicates a specific protein-ligand complex in above sets, with 'xxxx' denoting the original complex ID in PDBbind and the data fields showing the following information. Note that here each row in such as file indicates an atom in the binding complex.

--------------------------------------------------------------------------------id - atom id with protein atoms starting from 1 and ligand atoms also starting from 1 (integer)

atmnum - atomic number (integer)

x,y,z - the X, Y, Z coordinates for the atom (float)

atmB,atmC,atmN,atmO,atmP,atmS,atmSe - whether the atom is of some specific type, such as B, C, N, O, P, S and Se (binary)

atmHalogen - whether the atom is a halogen atom (binary)

atmMetal,atmMetallic - whether the atom is metal (binary)

hybridization - hybridization type of the atom (integer)

heavyneighbors - number of heavy-atom neighbors (integer)

heteroneighbors - number of hetero-atom neighbors (integer)

hydrophobic,aromatic,acceptor,donor,ring - pharmacophoric properties of the atom (binary)

partialCH - paricial charge of the atom (float)

posionizable,negionizable - whether the atom is positively ionizable or negatively ionizable (binary)

exlvolume - excluded volume of the atom (float)

vdwrad - VDW radius of the atom (float)

moltype - molecule the atom belongs to (0 for protein and 1 for ligand)

"neighbors(nbr:idx--anum--(sbond,dbond,tbond,arombond,ringbond))" - information of the covalent neighboring atoms for the atom--------------------------------------------------------------------------------
DOI: 10.5281/zenodo.14504532
title: Datasets for AGIMA-Score modeling - updated

description: This data repositary includes the following datasets.

(1) 'rs.zip' -- It is a secondary dataset that originates from the Refined Set in PDBbind database (version V2020). When training models like AGIMA-Score, the complexes in the validation/test sets need to be removed. 

(2) 'cs.zip' -- It is a secondary dataset that originates from the Core Set (CASF-2016) in PDBbind database (version V2020). It was used as the validation set (for parameter tuning) when building the AGIMA-Score models.

(3) 'test1.zip' -- It is a secondary dataset that originates from CSAR-HiQ1. It was used as the Test1 set for evaluating the AGIMA-Score models.

(4) 'test2.zip' -- It is a secondary dataset that originates from CSAR-HiQ2. It was used as the Test2 set for evaluating the AGIMA-Score models.

(5) 'indexes.zip' -- It includes the labels (binding affinity data) for the complexes in above (1)~(4) sets.

A file 'xxxx_atm_prop.txt' indicates a specific protein-ligand complex in above sets, with 'xxxx' denoting the original complex ID in PDBbind and the data fields showing the following information. Note that here each row in such as file indicates an atom in the binding complex.

--------------------------------------------------------------------------------id - atom id with protein atoms starting from 1 and ligand atoms also starting from 1 (integer)

atmnum - atomic number (integer)

x,y,z - the X, Y, Z coordinates for the atom (float)

atmB,atmC,atmN,atmO,atmP,atmS,atmSe - whether the atom is of some specific type, such as B, C, N, O, P, S and Se (binary)

atmHalogen - whether the atom is a halogen atom (binary)

atmMetal,atmMetallic - whether the atom is metal (binary)

hybridization - hybridization type of the atom (integer)

heavyneighbors - number of heavy-atom neighbors (integer)

heteroneighbors - number of hetero-atom neighbors (integer)

hydrophobic,aromatic,acceptor,donor,ring - pharmacophoric properties of the atom (binary)

partialCH - paricial charge of the atom (float)

posionizable,negionizable - whether the atom is positively ionizable or negatively ionizable (binary)

exlvolume - excluded volume of the atom (float)

vdwrad - VDW radius of the atom (float)

moltype - molecule the atom belongs to (0 for protein and 1 for ligand)

"neighbors(nbr:idx--anum--(sbond,dbond,tbond,arombond,ringbond))" - information of the covalent neighboring atoms for the atom--------------------------------------------------------------------------------
DOI: 10.6084/m9.figshare.28119638
title: A whole-genome study suggests a taxonomic rearrangement of <i>Saccharopolyspora subtropica</i> as a later heterotypic synonym of <i>Saccharopolyspora thermophila</i> and <i>Saccharopolyspora spinosporotrichia</i> as a later heterotypic synonym of <i>Saccharopolyspora erythraea</i>

description: Supplementary Material for 'A whole-genome study suggests a taxonomic rearrangement of <i>Saccharopolyspora subtropica</i> as a later heterotypic synonym of <i>Saccharopolyspora thermophila</i> and <i>Saccharopolyspora spinosporotrichia</i> as a later heterotypic synonym of <i>Saccharopolyspora erythraea</i>', as described in International Journal of Systematic and Evolutionary Microbiology.
DOI: 10.15468/dl.3csd25
title: Occurrence Download

description: A dataset containing 607 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cedrelinga cateniformis (Ducke) Ducke)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 607 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024537-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34934/dvn/jofl09
title: SEAD Platform Survey

description: The SEAD Platform Survey is conducted by the SEAD (Sustainable Employment in the Age of Digitalization) Consortium consisting of partners from VUB (Vrije Universiteit Brussel), KU Leuven, ULiège (University of Liège) and ULB (Université libre de Bruxelles) - funded by Belspo. The SEAD Platform Survey is a cross-sectional internet survey, designed to investigate the socio-demographic characteristics, work- and employment conditions, health and well-being, social protection, income (security) and career prospects of workers in the Belgian platform economy. The target population of the survey was made up of platform workers living in Belgium, regardless of age or type of platform activity. The SEAD Platform Survey surveyed a gross total of 918 platform workers between February 2022 until February 2023. After considering inclusion criteria, duplicate entries, completeness, missing data, minimum valid information on job quality variables, and unrealistic values, the sample was limited to 368 platform workers. Further information about the recruitment process and data quality can be found in the following publication: Gevaert, J., Doms, J., Vandevenne, E. et al. Strategies for surveying platform workers: lessons from a Belgian case study. Qual Quant (2024). https://doi.org/10.1007/s11135-024-01935-5 Only metadata is deposited because of restricted exploitation specified in the informed consent information sheet for participants.
DOI: 10.15468/dl.qvyump
title: Occurrence Download

description: A dataset containing 87075 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Banc de dades de biodiversitat de Catalunya-ArtroCat"
 ]
}

 The dataset includes 87075 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024526-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.zdmmku4l
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (6808997 records)
DOI: 10.15468/dl.t39dnk
title: Occurrence Download

description: A dataset containing 5404 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cercocarpus ledifolius Nutt., Cercocarpus ledifolius Nutt. ex Torr. & A.Gray)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5404 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024538-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28649120
title: CORMIX Scoping Review

description: This repository contains the scoping review data that informed the development of the COnsolidated Checklist for Reporting MIXed Methods Research (CORMIX). The data comprises items extracted from relevant literature on mixed methods research reporting.This dataset was generated from a comprehensive scoping review of literature related to mixed methods research reporting standards. The scoping review was conducted across multiple databases including PubMed, EMBASE, PsycINFO, ERIC, CINAHL, ProQuest, and SCOPUS, as well as reviewer's guidelines of major journals and grey literature. The search period covered database inception until September 2024.
DOI: 10.15468/dl.arnuh9
title: Occurrence Download

description: A dataset containing 954657 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Apis mellifera Linnaeus, 1758"
 ]
}

 The dataset includes 954657 records from 1713 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024521-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.phw3yv
title: Occurrence Download

description: A dataset containing 3743083 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 3743083 records from 2686 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002521-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4z8vu3
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Masdevallia phasmatodes Königer"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020260-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m67wd9
title: Occurrence Download

description: A dataset containing 177060 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "OccurrenceStatus is Present",
 "TaxonKey is Sciurus carolinensis Gmelin, 1788"
 ]
}

 The dataset includes 177060 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035921-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3rbdkc
title: Occurrence Download

description: A dataset containing 3468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "OccurrenceStatus is Present",
 "TaxonKey is Parkia biglobosa (Jacq.) R.Br. ex G.Don"
 ]
}

 The dataset includes 3468 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259039-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bsrjfm
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aloe nuttii Baker"
 ]
}

 The dataset includes 116 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025727-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qavs7y
title: Occurrence Download

description: A dataset containing 503 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Alternanthera philoxeroides (Mart.) Griseb."
 ]
}

 The dataset includes 503 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035918-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yw377d
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vanilla ×tahitensis J.W.Moore",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 60 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0263174-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u7kcyh
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vipera transcaucasiana Boulenger, 1913)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 28 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070039-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8vunds
title: Occurrence Download

description: A dataset containing 1640 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Caulerpa taxifolia (M.Vahl) C.Agardh)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1640 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259045-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a3fy2q
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aloe newtonii J.-B.Castillon"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025708-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pcpgq2
title: Occurrence Download

description: A dataset containing 843 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dioscorea minutiflora Engl.",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 843 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0263175-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybkdxa
title: Occurrence Download

description: A dataset containing 548359 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "CoordinateUncertaintyInMeters 0.0-5129.0",
 "Country is Norway",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta",
 "Year 2018-2019"
 ]
}

 The dataset includes 548359 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035922-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.