cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/kwr339
title: Nomenclatural and taxonomic survey of the South American clade of Lobelia section Rhynchopetalum (Campanulaceae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Rollim, Isis De Mello, Coelho, Guilherme Peres, Miotto, Silvia Teresinha Sfoggia, Iganci, João Ricardo Vieira, Oliveira, Marcelo Trovó Lopes De (2022): Nomenclatural and taxonomic survey of the South American clade of Lobelia section Rhynchopetalum (Campanulaceae). Phytotaxa 539 (1): 45-54, DOI: 10.11646/phytotaxa.539.1.5, URL: http://dx.doi.org/10.11646/phytotaxa.539.1.5AbstractLobelia is the largest genus within the subfamily Lobelioideae of Campanulaceae, comprising 415 species and ranging from small to exuberant woody herbs. In an attempt to clarify the systematics of Lobelia, a nomenclatural and taxonomic survey of its section Rhynchopetalum for South America is here presented. This group is monophyletic and consists of ten species, whose important distinguishing characters are the robust habit, often woody and pachycaulous, terminal racemes of large sub-bilabiate flowers, with only the ventral anthers bearded, and capsules producing numerous lenticular, commonly winged, seeds with a striate-reticulate testa. Along with a synopsis of the group, an identification key, and a distribution map, we also propose seven lectotypifications (for L. fistulosa, L. glazioviana, L. hassleri, L. hilaireana, L. langeana, L. organensis, and L. uranocoma) and four new synonymizations (for Haynadia organensis var. insignis, L. imperialis, L. imperialis var. kanitzii, and L. stellfeldii).
DOI: 10.15468/raq6qz
title: Order Rodentia - Family Anomaluridae

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Fritz Dieterlen (1993): Order Rodentia - Family Anomaluridae. In: Don E. Wilson, DeeAnn M. Reeder (Eds): Mammal Species of the World (2 nd Edition). Washington and London: Smithsonian Institution Press: 757-758, ISBN: 1-56098-217-9, DOI: 10.5281/zenodo.7359185
DOI: 10.15468/dl.3zs4qj
title: Occurrence Download

description: A dataset containing 64009 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Canis lupus",
 "Year 1000-2011"
 ]
}

 The dataset includes 64009 records from 264 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066436-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/ytscn9
title: Early teleost otolith morphogenesis observed in the Jurassic of Franconia, Bavaria, southern Germany

description: This dataset contains the digitized treatments in Plazi based on the original journal article Schwarzhans, Werner, Keupp, Helmut (2022): Early teleost otolith morphogenesis observed in the Jurassic of Franconia, Bavaria, southern Germany. Zitteliana 96: 51-67, DOI: http://dx.doi.org/10.3897/zitteliana.96.81737, URL: http://dx.doi.org/10.3897/zitteliana.96.81737
DOI: 10.15468/kkxb84
title: New Records Of Heterocera (Lepidoptera) From The Republic Of Tyva (Southern Siberia, Russia)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Knyazev, S. A. (2019): New Records Of Heterocera (Lepidoptera) From The Republic Of Tyva (Southern Siberia, Russia). Amurian Zoological Journal XI (1): 42-47, DOI: 10.33910/1999-4079-2019-11-1-42-47, URL: http://dx.doi.org/10.33910/1999-4079-2019-11-1-42-47Abstract. The early spring aspect of the Lepidoptera fauna in the Republic of Tyva has not been studied until recently. Consequently, many species have not been recorded for the 25 th region of Russia in the Catalogue of Lepidoptera of Russia. The article reviews 14 species of Heterocera from the Republic of Tyva, 12 of them being reported from the region for the first time. Eilicrinia subcordaria (Herrich-Schäffer, 1852) first reported from the territory of Siberia; Semidesertobia ubinica Beljaev, 2000 is the new species for the fauna of Russia. The paper features photos of rare and little-known species.
DOI: 10.15468/yydmb7
title: New diagnostic microcharacters of the cephalothoracic appendages in Cyclops O. F. Müller, 1776 (Crustacea, Copepoda, Cyclopoida)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hołyńska, Maria, Dahms, Hans-Uwe (2004): New diagnostic microcharacters of the cephalothoracic appendages in Cyclops O. F. Müller, 1776 (Crustacea, Copepoda, Cyclopoida). Zoosystema 26 (2): 175-198, DOI: 10.5281/zenodo.5402379ABSTRACTThe morphology of the cephalothoracic appendages is compared among 12 taxa of Cyclops O. F. Müller, 1776: C. strenuus strenuus Fischer, 1851, C. strenuus landei Koźmiński, 1933, C. abyssorum Sars, 1863, C. furcifer Claus, 1857, C. heberti Einsle, 1996, C. singularis Einsle, 1996, C. scutifer Sars, 1863, C. kolensis Lilljeborg, 1901, C. insignis Claus, 1857, C. canadensis Einsle, 1988, C. columbianus Lindberg, 1956, and C. alaskaensis Lindberg, 1956. Diagnostic microcharacters found to be new or rarely mentioned in the earlier descriptions are: the relative length of the aesthetascs on the ancestral XXI antennular segment; the spinule ornamentation on the caudal surface of the antennal coxobasis; spinule ornamentation of the maxillular palp, and setulation of the maxillular palp setae; spinule ornamentation on the frontal surface of the maxilliped syncoxopodite; setulation of the medial spine and spinule ornamentation on the frontal surface of leg 1 basipodite. Hypothetical roles of the elongate aesthetascs on the ancestral XXI antennular segment in the pelagic Cyclops species, and long pinnate setae on the maxillular palp are discussed. C. strenuus landei is synonymized with C. strenuus strenuus, and C. strenuus strenuus sensu Koźmiński, 1933 is found to be conspecific with C. heberti. Refined morphological delimitation of the taxa resulted in obtaining new data on the geographical distribution of C. heberti (southern France, central Italy, northern Germany and Poland) and C. singularis (Hungary and Slovakia). Nearctic occurence of C. strenuus has not been confirmed.
DOI: 10.15468/wzfmfc
title: New Eocene South American native ungulates from the Quebrada de los Colorados Formation at Los Cardones National Park, Argentina

description: This dataset contains the digitized treatments in Plazi based on the original journal article Fernández, Mercedes, Zimicz, Ana N., Bond, Mariano, Chornogubsky, Laura, Arnal, Michelle, Cárdenas, Magalí, Fernicola, Juan C. (2021): New Eocene South American native ungulates from the Quebrada de los Colorados Formation at Los Cardones National Park, Argentina. Acta Palaeontologica Polonica 66 (1): 85-97, DOI: 10.4202/app.00784.2020, URL: http://dx.doi.org/10.4202/app.00784.2020
DOI: 10.15468/je9wy5
title: First Notoxus Geoffroy, 1762 (Coleoptera: Anthicidae) from the Cardamom Hills of the Western Ghats with new faunistic records

description: This dataset contains the digitized treatments in Plazi based on the original journal article Telnov, Dmitry (2025): First Notoxus Geoffroy, 1762 (Coleoptera: Anthicidae) from the Cardamom Hills of the Western Ghats with new faunistic records. Zootaxa 5665 (1): 144-150, DOI: 10.11646/zootaxa.5665.1.11, URL: https://doi.org/10.11646/zootaxa.5665.1.11AbstractNotoxus yelamala sp. nov., the first representative of its genus from the Cardamom Hills of the Western Ghats, is described and illustrated. New faunistic records are provided for eight Palaearctic and three Oriental species of Notoxus Geoffroy, 1762 including new country records for Kyrgyzstan, Pakistan, and Syria.
DOI: 10.15468/t7q68r
title: Notes on some Abacetina (Coleoptera: Carabidae: Pterostichini), with descriptions of a new genus and new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Fedorenko, D. N. (2022): Notes on some Abacetina (Coleoptera: Carabidae: Pterostichini), with descriptions of a new genus and new species. Russian Entomological Journal 31 (1): 15-26, DOI: 10.15298/rusentj.31.1.03, URL: http://dx.doi.org/10.15298/rusentj.31.1.03
DOI: 10.5281/zenodo.18063318
title: Demonstration datasets for Spatial Omics Toolkit 2 (sotk2)

description: This Zenodo record provides demonstration data for the Spatial Omics Toolkit 2 (sotk2).

 

The collection includes three publicly available transcriptomics datasets spanning bulk RNA-seq and spatial transcriptomics modalities:



GLASS (Glioma Longitudinal AnalySiS Consortium): bulk RNA-seq from matched primary and recurrent glioma samples

IVYGAP (Ivy Glioblastoma Atlas Project): bulk RNA-seq stratified by anatomic features (CT, IT, LE, MVP, PAN)

HEILAND (Ravi et al., Cancer Cell, 2022): 10x Genomics Visium v1 spatial transcriptomics


For reproducible downstream use and improved demonstration workflows, the original data were imported into R and re-exported as binary R objects (.rds). Each dataset contains the following components:



GLASS: cNMF results, bulk RNA-seq expression data, and sample annotations

IVYGAP: cNMF results

HEILAND: cNMF results, a Seurat object for the Visium data and a spot coordinate file for one sample (UKF269_T)


Primary sources used for acquisition:



GLASS: https://www.synapse.org/glass (PMID: 29432615)

IVYGAP: https://glioblastoma.alleninstitute.org/ (PMID: 29748285)

HEILAND: https://doi.org/10.5061/dryad.h70rxwdmj (PMID: 35700707)


For documentation, usage examples, and sotk2 workflows, see: https://www.github.com/Snyder-Institute/sotk2

Note: Among the files, soObj.RDS was preprocessed using the sotk2 package, allowing users to bypass pre-calculation and use it directly for visualization and interpretation.
DOI: 10.5281/zenodo.18063317
title: Demonstration datasets for Spatial Omics Toolkit 2 (sotk2)

description: This Zenodo record provides demonstration data for the Spatial Omics Toolkit 2 (sotk2).

 

The collection includes three publicly available transcriptomics datasets spanning bulk RNA-seq and spatial transcriptomics modalities:



GLASS (Glioma Longitudinal AnalySiS Consortium): bulk RNA-seq from matched primary and recurrent glioma samples

IVYGAP (Ivy Glioblastoma Atlas Project): bulk RNA-seq stratified by anatomic features (CT, IT, LE, MVP, PAN)

HEILAND (Ravi et al., Cancer Cell, 2022): 10x Genomics Visium v1 spatial transcriptomics


For reproducible downstream use and improved demonstration workflows, the original data were imported into R and re-exported as binary R objects (.rds). Each dataset contains the following components:



GLASS: cNMF results, bulk RNA-seq expression data, and sample annotations

IVYGAP: cNMF results

HEILAND: cNMF results, a Seurat object for the Visium data and a spot coordinate file for one sample (UKF269_T)


Primary sources used for acquisition:



GLASS: https://www.synapse.org/glass (PMID: 29432615)

IVYGAP: https://glioblastoma.alleninstitute.org/ (PMID: 29748285)

HEILAND: https://doi.org/10.5061/dryad.h70rxwdmj (PMID: 35700707)


For documentation, usage examples, and sotk2 workflows, see: https://www.github.com/Snyder-Institute/sotk2

Note: Among the files, soObj.RDS was preprocessed using the sotk2 package, allowing users to bypass pre-calculation and use it directly for visualization and interpretation.
DOI: 10.15468/exsnvm
title: New and revised taxa of Carboniferous spiriferides (Brachiopoda, Spiriferida) from the Donets Basin (Ukraine) and South Urals (Russia)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Poletaev, Vladyslav (2024): New and revised taxa of Carboniferous spiriferides (Brachiopoda, Spiriferida) from the Donets Basin (Ukraine) and South Urals (Russia). European Journal of Taxonomy 968: 132-155, DOI: 10.5852/ejt.2024.968.2723, URL: https://europeanjournaloftaxonomy.eu/index.php/ejt/article/download/2723/12515Abstract. The brachiopods Meristorygma donakovae Poletaev, 2018, Johnsoniana nom. nov. from Mississippian strata of the Urals and Betaneospirifer stepanovi Poletaev, 2015 from Gzhelian rocks of the Urals are re-described. Tiramnia davidi sp. nov. from the Bashkirian of the Donets Basin (Ukraine) is newly described. Revision of available data shows that the revised genus Verneuilia Hall & Clarke, 1893 belongs to the family Elythynidae Gourvennec, 1994 of the superfamily Martinioidea Waagen, 1883. The genera Johnsoniana nom. nov., Changshunella Sun et al., 2004 and possibly Minythyra Branton, 1984 belong to the family Oceaniidae Poletaev, 2015 of the superfamily Paeckelmanelloidea Ivanova, 1972. The importance of characters such as denticulation of the hinge line of the interarea and type of vascular impression in the diagnosis of higher spiriferid taxa is shown.
DOI: 10.15468/dl.wp6z5p
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Phengaris arion",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1970",
 "Country is one of (Italy, Switzerland, Germany, Austria, Slovenia, France)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066443-251120083545085/datasets/export for details.
DOI: 10.15468/pfmv7f
title: Pilumnidae Samouelle, 1819 (Crustacea: Decapoda: Brachyura: Pilumnidae) of the Persian Gulf and Gulf of Oman, with a note on their phylogeny

description: This dataset contains the digitized treatments in Plazi based on the original journal article Fahimi, Neda, Naderloo, Reza (2023): Pilumnidae Samouelle, 1819 (Crustacea: Decapoda: Brachyura: Pilumnidae) of the Persian Gulf and Gulf of Oman, with a note on their phylogeny. Zootaxa 5264 (2): 256-274, DOI: 10.11646/zootaxa.5264.2.6, URL: http://dx.doi.org/10.11646/zootaxa.5264.2.6AbstractMembers of the family Pilumnidae are common on intertidal and subtidal tropical and subtropical rocky, coral rubble and mud habitats. In the current study we collected 17 species belonging to 10 genera from the Iranian coast of the Persian Gulf and Gulf of Oman. The species were examined using detailed morphological characteristics and any variation was recorded and compared with material from other geographical regions. Further, we compared 1171 base pairs of two mitochondrial genes (COI and 16S rRNA) and one nuclear gene (H3), and present reference sequences for the regional pilumnids, some of them being the first, as a useful basis for comparison with pilumnids from elsewhere. Two species, Glabropilumnus levimanus and Pilumnopeus africanus, are recorded for the first time from northwestern Indian Ocean, and a possibly undescribed species of Pilumnus was found that requires more detailed study. The results confirmed that the two previously recorded species, Pilumnus minutus De Haan, 1835 and P. vespertilio (Fabricius, 1793) do not occur in the Persian Gulf and Gulf of Oman. The current diversity of Pilumnidae in the region is increased to 28 species in 14 genera. Monophyly of the given genera and species in the study area is well corroborated.Key word: taxonomy, hairy crabs, northwestern Indian Ocean, mitochondrial genes
DOI: 10.15468/3rbgdh
title: New species of sabellariids (Annelida: Sabellariidae) from the Caribbean Sea and the Gulf of Mexico

description: This dataset contains the digitized treatments in Plazi based on the original journal article Chávez-López, Yessica (2022): New species of sabellariids (Annelida: Sabellariidae) from the Caribbean Sea and the Gulf of Mexico. European Journal of Taxonomy 831: 109-148, DOI: 10.5852/ejt.2022.831.1873, URL: http://dx.doi.org/10.5852/ejt.2022.831.1873Abstract. In the Caribbean Sea and the Gulf of Mexico, 15 species of sabellariids have been described. Since Kirtley’s (1994) worldwide review, at least seven species have not been re-recorded for this region. Therefore, the aims of this contribution were: a) to review the sabellariids held in scientific collections, b) to generate standardized descriptions, and c) to provide taxonomic identification keys for the species of the region. The sabellariids of two Mexican and one US scientific collection were reviewed. Five new species are described: Lygdamis pechi sp. nov. from Veracruz, Gulf of Mexico, Mariansabellaria caribbea sp. nov. from Quintana Roo, Mexico, Phalacrostemma danieli sp. nov. from southwest of Grenada, Tetreres israeli sp. nov. from the Virgin Islands, and T. oscari sp. nov. from Florida. Another morphospecies, Phalacrostemma sp., is characterized by a single incomplete specimen from the Bahamas. Also, new records of Phalacrostemma perkinsi Kirtley, 1994, and P. dorothyae Kirtley, 1994 were made.
DOI: 10.15468/59crzw
title: Late Viséan (Mississippian) ammonoids (Cephalopoda) from the Central Moroccan Meseta

description: This dataset contains the digitized treatments in Plazi based on the original journal article Korn, Dieter, Ebbighausen, Volker (2025): Late Viséan (Mississippian) ammonoids (Cephalopoda) from the Central Moroccan Meseta. European Journal of Taxonomy 989: 50-93, DOI: 10.5852/ejt.2025.989.2885, URL: https://europeanjournaloftaxonomy.eu/index.php/ejt/article/download/2885/13085Abstract. Late Viséan (Mississippian) ammonoids (Cephalopoda) from the Central Moroccan Meseta are described monographically for the first time. Several localities have yielded low-diversity assemblages, consisting mainly of species already known from southern Portugal, Ireland, northern England and the Rhenish Mountains. This clearly places the Moroccan Meseta within the Rhenohercynian-Subvariscan Province. The assemblages from the Moroccan Meseta are confined to a narrow stratigraphic interval, likely representing the Goniatites crenistria Zone, Goniatites sphaericus Zone, Goniatites spirifer Zone and Arnsbergites gracilis Zone. The new species Goniatites amarensis sp. nov. is described.
DOI: 10.15468/dl.6rb6f3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Phengaris teleius",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1970",
 "Country is one of (Italy, Switzerland, Germany, Austria, Slovenia, France)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066444-251120083545085/datasets/export for details.
DOI: 10.15468/dgnuhc
title: Studies on the genus Chrysodema (Coleoptera: Buprestidae: Chrysochroinae) part II.

description: This dataset contains the digitized treatments in Plazi based on the original journal article Frank, David (2022): Studies on the genus Chrysodema (Coleoptera: Buprestidae: Chrysochroinae) part II. Zootaxa 5214 (4): 507-543, DOI: 10.11646/zootaxa.5214.4.3AbstractThe second part of the study on the genus Chrysodema Laporte de Castelnau & Gory, 1835 is presented.All taxa are revised based on a comparative study of extensive material including types of all described taxa. Chrysodema (Chrysodema) eximia ‘complex’ is revised and the new C. antennata species-group is established in the subgenus Chrysodema s. str. Two new species and one new subspecies are described: Chrysodema (Chrysodema) holynskii sp. nov. from Philippines: Masbate Island; Chrysodema (Chrysodema) sekerkai sp. nov. from Indonesia: Bangkai, Peleng and Sulawesi islands; and Chrysodema (Chrysodema) antennata barriesi subsp. nov. from Philippines: Palawan Island. Lectotypes are designated for the following taxa to ensure their correct application and recognition in future: C. (C.) antennata Saunders, 1874; C. (C.) hebes Kerremans, 1892; C. (C.) intercostata Saunders, 1874 and C. (C.) obsoleta J. Thomson, 1879. All herein included taxa are illustrated with colour photographs of habitus and the male aedeagus. Keys and maps of distribution to all taxa in each revised species-group are presented.
DOI: 10.34740/kaggle/dsv/14304137
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dzf4sq
title: Hystricidae

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Don E. Wilson, Thomas E. Lacher, Jr, Russell A. Mittermeier (2016): Hystricidae. In: Handbook of the Mammals of the World – Volume 6 Lagomorphs and Rodents I. Barcelona: Lynx Edicions: 304-312, ISBN: 978-84-941892-3-4, DOI: 10.5281/zenodo.6612213
DOI: 10.15468/8kekcm
title: A review of Coelopoetinae (Lepidoptera, Gelechioidea, Pterolonchidae), a moth subfamily confined to western North America, with descriptions of seven new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kaila, Lauri (2024): A review of Coelopoetinae (Lepidoptera, Gelechioidea, Pterolonchidae), a moth subfamily confined to western North America, with descriptions of seven new species. Zootaxa 5458 (3): 361-384, DOI: 10.11646/zootaxa.5458.3.3, URL: http://dx.doi.org/10.11646/zootaxa.5458.3.3AbstractSystematics and taxonomy of the gelechioid subfamily Coelopoetinae are reviewed. Following the current classification, this group is considered to form its own monotypic subfamily in Pterolonchidae with one recognized genus, Coelopoeta, after a convoluted and, in part, arguably conjectural, historical systematic treatment. On morphological basis (appearance, male genitalia) and with support from DNA barcodes, the genus is divided into two discrete units probably meriting recognition as separate genera. The species groups are informally treated as the nominate C. glutinosi species group, and the C. fissurina species group. In the absence of knowledge of females or the biologies of any of the species of the C. fissurina group, species of both groups are here provisionally included in Coelopoeta. In total, 10 species are recognized, seven of which are here described as new: C. glutinosi species group: C. alboflava Kaila, sp. nov., C. aprica Kaila, sp. nov., C. aurora Kaila, sp. nov., C. fulminea Kaila, sp. nov. and C. sariae Kaila, sp. nov.; C. fissurina species group: C. fissurina Kaila, sp. nov. and C. valalbui Kaila, sp. nov. The three previously known species, C. glutinosi Walsingham, 1907, C. maiadella Kaila, 1995 and C. phaceliae Kaila, 1995 are redescribed. All three of these species belong to the glutinosi species group. A lectotype is designated for C. glutinosi Walsingham, 1907. Some southwestern Coelopoeta species are potentially under threat of decline or even extinction due to the apparently increasingly intense and frequent forest fires. This threat is significant as the species with known life histories spend their entire life cycles above ground in low vegetation.