cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7270112.v2
title: Additional file 3: of Genome-wide analysis of Rf-PPR-like (RFL) genes and a new InDel marker development for Rf1 gene in cytoplasmic male sterile CMS-D2 Upland cotton

description: Table S3. SNP information of RFL genes in G. hirsutum in A, B, and R lines. (XLSX 16032Â kb)
DOI: 10.5281/zenodo.4005243
title: On the use of real-time mortality data in modelling and analysis during an epidemic outbreak – extended data

description: This project contains extended data related to the journal article "On the use of real-time mortality data in modelling and analysis during an epidemic outbreak" by Per Liljenberg This project contains the following extended data: Liljenberg2020_OGR_Appendix.pdf (Appendix to the main article) swedish_covid_deaths_OGR.R. (R-script to generate graphs and nowcasts in the paper.) MDAR author checklist.pdf (Completed MDAR reporting checklist)
DOI: 10.6084/m9.figshare.7270112.v1
title: Additional file 3: of Genome-wide analysis of Rf-PPR-like (RFL) genes and a new InDel marker development for Rf1 gene in cytoplasmic male sterile CMS-D2 Upland cotton

description: Table S3. SNP information of RFL genes in G. hirsutum in A, B, and R lines. (XLSX 16032Â kb)
DOI: 10.7284/115653
title: Sound Speed Sensor data collected during research cruise SKQ201502T using a AML SVXchange instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115657
title: Water Temperature data collected during research cruise SKQ201502T using a HEITRONICS CT15.10 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7270091
title: Additional file 2: of Genome-wide analysis of Rf-PPR-like (RFL) genes and a new InDel marker development for Rf1 gene in cytoplasmic male sterile CMS-D2 Upland cotton

description: Table S2. Expression level of RFL genes in G. hirsutum in different tissues and A, B, and R lines. (XLSX 11Â kb)
DOI: 10.7284/115654
title: TSG (Thermosalinograph) data collected during research cruise SKQ201502T using a Sea-Bird SBE-45 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115678
title: Anemometer data collected during research cruise SKQ201503T using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7270091.v2
title: Additional file 2: of Genome-wide analysis of Rf-PPR-like (RFL) genes and a new InDel marker development for Rf1 gene in cytoplasmic male sterile CMS-D2 Upland cotton

description: Table S2. Expression level of RFL genes in G. hirsutum in different tissues and A, B, and R lines. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.7270085
title: Additional file 3: of High-throughput sequencing of sorted expression libraries reveals inhibitors of bacterial cell division

description: Table S1. E. coli UTI-89 genomic regions identified in overexpression screens for mediators of filamentation. Table S1A contains the combined MACS output from the two replicate screens. Regions indicated in bold text represent those found in common between the replicates (with an overlap of 100Â bp or more). Those underlined indicate the 23 high-stringency regions found in common between replicates (with an overlap of 100Â bp or more) and also were above the P-value threshold of 70 (see also Table 2). The gene name(s) included were determined by annotating the region from start to end (bp) and listing all ORFs within or overlapping those coordinates. This therefore will include partial ORFs that may not directly cause filamentation; further mapping may be required in these cases. Table S1B shows only the regions identified in common between the two replicate screens (with overlap of 100Â bp or greater), and identifies ORFs within these that were not found to have direct homologs in E. coli K-12. (XLSX 69 kb)
DOI: 10.6084/m9.figshare.7270091.v1
title: Additional file 2: of Genome-wide analysis of Rf-PPR-like (RFL) genes and a new InDel marker development for Rf1 gene in cytoplasmic male sterile CMS-D2 Upland cotton

description: Table S2. Expression level of RFL genes in G. hirsutum in different tissues and A, B, and R lines. (XLSX 11Â kb)
DOI: 10.7284/115679
title: Anemometer data collected during research cruise SKQ201503T using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Processed data created by vessel technician during a Field_expedition
DOI: 10.6084/m9.figshare.7270082
title: MOESM2 of Evidence for the impacts of agroforestry on agricultural productivity, ecosystem services, and human well-being in high-income countries: a systematic map protocol

description: Additional file 2. Test studies and scoping results. List of test studies and results of search string scoping process.
DOI: 10.6084/m9.figshare.7270085.v1
title: Additional file 3: of High-throughput sequencing of sorted expression libraries reveals inhibitors of bacterial cell division

description: Table S1. E. coli UTI-89 genomic regions identified in overexpression screens for mediators of filamentation. Table S1A contains the combined MACS output from the two replicate screens. Regions indicated in bold text represent those found in common between the replicates (with an overlap of 100Â bp or more). Those underlined indicate the 23 high-stringency regions found in common between replicates (with an overlap of 100Â bp or more) and also were above the P-value threshold of 70 (see also Table 2). The gene name(s) included were determined by annotating the region from start to end (bp) and listing all ORFs within or overlapping those coordinates. This therefore will include partial ORFs that may not directly cause filamentation; further mapping may be required in these cases. Table S1B shows only the regions identified in common between the two replicate screens (with overlap of 100Â bp or greater), and identifies ORFs within these that were not found to have direct homologs in E. coli K-12. (XLSX 69 kb)
DOI: 10.21227/pnqm-0r13
title: Driving simulator experiment measurement

description: The data are associated with a submitted journal paper.
DOI: 10.6084/m9.figshare.7270082.v1
title: MOESM2 of Evidence for the impacts of agroforestry on agricultural productivity, ecosystem services, and human well-being in high-income countries: a systematic map protocol

description: Additional file 2. Test studies and scoping results. List of test studies and results of search string scoping process.
DOI: 10.7284/115660
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise SKQ201503T using a Sea-Bird SBE-911+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7270079
title: Additional file 1: of Genome-wide analysis of Rf-PPR-like (RFL) genes and a new InDel marker development for Rf1 gene in cytoplasmic male sterile CMS-D2 Upland cotton

description: Table S1. Information of primers for qRT-PCR and promoter analysis in A, B, and R lines. (XLSX 8Â kb)
DOI: 10.7284/115664
title: Flowmeter data collected during research cruise SKQ201503T using a Omega FP-2541 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7270079.v2
title: Additional file 1: of Genome-wide analysis of Rf-PPR-like (RFL) genes and a new InDel marker development for Rf1 gene in cytoplasmic male sterile CMS-D2 Upland cotton

description: Table S1. Information of primers for qRT-PCR and promoter analysis in A, B, and R lines. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.7270079.v1
title: Additional file 1: of Genome-wide analysis of Rf-PPR-like (RFL) genes and a new InDel marker development for Rf1 gene in cytoplasmic male sterile CMS-D2 Upland cotton

description: Table S1. Information of primers for qRT-PCR and promoter analysis in A, B, and R lines. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.7270070
title: MOESM1 of Evidence for the impacts of agroforestry on agricultural productivity, ecosystem services, and human well-being in high-income countries: a systematic map protocol

description: Additional file 1. List of high-income countries (according to the World Bank 2018 fiscal year classification [34]). Tabular list of high-income countries according to the World Bank 2018 fiscal year classification.
DOI: 10.6084/m9.figshare.7270070.v1
title: MOESM1 of Evidence for the impacts of agroforestry on agricultural productivity, ecosystem services, and human well-being in high-income countries: a systematic map protocol

description: Additional file 1. List of high-income countries (according to the World Bank 2018 fiscal year classification [34]). Tabular list of high-income countries according to the World Bank 2018 fiscal year classification.
DOI: 10.7284/115665
title: Flowmeter data collected during research cruise SKQ201503T using a Krohne Optiflux 5000 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115667
title: Fluorometer data collected during research cruise SKQ201503T using a Turner Cyclops-7 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7270061
title: Additional file 1: of High-throughput sequencing of sorted expression libraries reveals inhibitors of bacterial cell division

description: Table S2. Primer sequences used for cloning the indicated ORFs into pBAD24. PCR products generated using these primers in the appropriate combinations were digested with the indicated restriction enzymes as appropriate for cloning. (XLSX 9 kb)
DOI: 10.7284/115668
title: GNSS (Global Navigation Satellite System) data collected during research cruise SKQ201503T using a C&C C-Nav 3050 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7270061.v1
title: Additional file 1: of High-throughput sequencing of sorted expression libraries reveals inhibitors of bacterial cell division

description: Table S2. Primer sequences used for cloning the indicated ORFs into pBAD24. PCR products generated using these primers in the appropriate combinations were digested with the indicated restriction enzymes as appropriate for cloning. (XLSX 9 kb)
DOI: 10.7284/115661
title: Gravimeter data collected during research cruise SKQ201503T using a Bell BGM-3 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7270052
title: Additional file 1: of A high-throughput sequencing assay to comprehensively detect and characterize unicellular eukaryotes and helminths from biological and environmental samples

description: Table S1. Examples of genera targeted by each primer pair. Table S2. Primer characteristics of primers from the literature. Table S3. Amplification of positive controls. The table shows the results of the sequencing assay when performed on pools of DNA from known parasites, with and without addition of Anopheles/Escherichia/Human DNA. Each column shows the percentage of the reads that match each observed species. Green text represents on-target species and red text shows off-target (often host) species amplification. Table S4. Results from all samples. Explanation of each column is presented in the excel sheet. Figure S1. Complementarity of the primer pairs targeting the same taxonomic groups. Apicomplexa and Nematoda each required three primer pairs to capture the diversity within these groups. The taxa amplified by each of the three primer sets are presented as Venn diagrams showing the overlap in species coverage. The percent within each sector is shown in parentheses. Figure S2. Overview of the pipeline for the in silico assessment of the primer amplification range, information content and specificity. Figure S3. PrimerTree results for each newly designed primer. The figures show, for each primer set, the PrimerTree plot and amplicon lengths. The PrimerTree results were restricted only to the targeted group to show the diversity of on-target taxonomic groups amplifiable. (ZIP 2497 kb)
DOI: 10.6084/m9.figshare.7270052.v1
title: Additional file 1: of A high-throughput sequencing assay to comprehensively detect and characterize unicellular eukaryotes and helminths from biological and environmental samples

description: Table S1. Examples of genera targeted by each primer pair. Table S2. Primer characteristics of primers from the literature. Table S3. Amplification of positive controls. The table shows the results of the sequencing assay when performed on pools of DNA from known parasites, with and without addition of Anopheles/Escherichia/Human DNA. Each column shows the percentage of the reads that match each observed species. Green text represents on-target species and red text shows off-target (often host) species amplification. Table S4. Results from all samples. Explanation of each column is presented in the excel sheet. Figure S1. Complementarity of the primer pairs targeting the same taxonomic groups. Apicomplexa and Nematoda each required three primer pairs to capture the diversity within these groups. The taxa amplified by each of the three primer sets are presented as Venn diagrams showing the overlap in species coverage. The percent within each sector is shown in parentheses. Figure S2. Overview of the pipeline for the in silico assessment of the primer amplification range, information content and specificity. Figure S3. PrimerTree results for each newly designed primer. The figures show, for each primer set, the PrimerTree plot and amplicon lengths. The PrimerTree results were restricted only to the targeted group to show the diversity of on-target taxonomic groups amplifiable. (ZIP 2497 kb)
DOI: 10.7284/115669
title: Gyrocompass data collected during research cruise SKQ201503T using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115670
title: Gyrocompass data collected during research cruise SKQ201503T using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115662
title: INS (Inertial Navigation System) data collected during research cruise SKQ201503T using a Kongsberg Seapath 320+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115671
title: Meteorological Station data collected during research cruise SKQ201503T using a Vaisala WXT520 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115658
title: Multibeam Echosounder data collected during research cruise SKQ201503T using a Kongsberg EM302 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115659
title: Multibeam Echosounder data collected during research cruise SKQ201503T using a Kongsberg EM710 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115672
title: Radiometer data collected during research cruise SKQ201503T using a RMR Co. PRP instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115673
title: Radiometer data collected during research cruise SKQ201503T using a Biospherical QSR-2150 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115663
title: Rain Gauge data collected during research cruise SKQ201503T using a OSI ORG-815 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115666
title: Rain Gauge data collected during research cruise SKQ201503T using a RM Young 50202 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115674
title: Singlebeam Echosounder data collected during research cruise SKQ201503T using a Kongsberg TOPAS PS-18 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.12628658
title: Neurocranial Morphologika file

description: Morphologika file (neurocranial patch subset) for REA 2020 analyses.
DOI: 10.7284/115675
title: Singlebeam Echosounder data collected during research cruise SKQ201503T using a L-3 ELAC LAZ 5100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115676
title: Sound Speed Sensor data collected during research cruise SKQ201503T using a AML SVXchange instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7269983
title: Additional file 1: of The genetic insulator RiboJ increases expression of insulated genes

description: Data.csv Experimental data. Analysis.ipynb Analysis methods as a jupyter notebook. (ZIP 16 kb)
DOI: 10.7284/115680
title: Water Temperature data collected during research cruise SKQ201503T using a HEITRONICS CT15.10 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.12628655
title: Facial patch Morphologika file

description: Morphologika file (facial patch subset) for REA 2020 analyses.
DOI: 10.6084/m9.figshare.7269983.v1
title: Additional file 1: of The genetic insulator RiboJ increases expression of insulated genes

description: Data.csv Experimental data. Analysis.ipynb Analysis methods as a jupyter notebook. (ZIP 16 kb)
DOI: 10.7284/115677
title: TSG (Thermosalinograph) data collected during research cruise SKQ201503T using a Sea-Bird SBE-45 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.12628655.v1
title: Facial patch Morphologika file

description: Morphologika file (facial patch subset) for REA 2020 analyses.
DOI: 10.7284/115681
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SKQ201504T using a Hawaii UHDAS instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115702
title: Anemometer data collected during research cruise SKQ201504T using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.12628652
title: Cranial Morphologika file

description: Morphologika file (total cranial set) for REA 2020
DOI: 10.7284/115703
title: Anemometer data collected during research cruise SKQ201504T using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Processed data created by vessel technician during a Field_expedition
DOI: 10.7284/115684
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise SKQ201504T using a Sea-Bird SBE-911+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115688
title: Flowmeter data collected during research cruise SKQ201504T using a Omega FP-2541 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7269941
title: Additional file 2: of Identification and antibiotic susceptibility of lactobacilli isolated from turkeys

description: Table S2. Containing original data on the identification of bacteria by MALDI-TOF MS, MIC values and the occurrence of resistance genes. (XLS 75 kb)
DOI: 10.7284/115689
title: Flowmeter data collected during research cruise SKQ201504T using a Krohne Optiflux 5000 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7269938
title: Additional file 6: of Long non-coding RNAs have age-dependent diurnal expression that coincides with age-related changes in genome-wide facultative heterochromatin

description: Diurnally expressed genes at 20Â months. (XLSX 30Â kb)
DOI: 10.6084/m9.figshare.7269941.v1
title: Additional file 2: of Identification and antibiotic susceptibility of lactobacilli isolated from turkeys

description: Table S2. Containing original data on the identification of bacteria by MALDI-TOF MS, MIC values and the occurrence of resistance genes. (XLS 75 kb)
DOI: 10.6084/m9.figshare.7269938.v1
title: Additional file 6: of Long non-coding RNAs have age-dependent diurnal expression that coincides with age-related changes in genome-wide facultative heterochromatin

description: Diurnally expressed genes at 20Â months. (XLSX 30Â kb)
DOI: 10.7284/115691
title: Fluorometer data collected during research cruise SKQ201504T using a Turner Cyclops-7 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7269932
title: Additional file 5: of Long non-coding RNAs have age-dependent diurnal expression that coincides with age-related changes in genome-wide facultative heterochromatin

description: Diurnally expressed genes at 12Â months. (XLSX 41Â kb)
DOI: 10.7284/115692
title: GNSS (Global Navigation Satellite System) data collected during research cruise SKQ201504T using a C&C C-Nav 3050 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7269932.v1
title: Additional file 5: of Long non-coding RNAs have age-dependent diurnal expression that coincides with age-related changes in genome-wide facultative heterochromatin

description: Diurnally expressed genes at 12Â months. (XLSX 41Â kb)
DOI: 10.7284/115685
title: Gravimeter data collected during research cruise SKQ201504T using a Bell BGM-3 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115693
title: Gyrocompass data collected during research cruise SKQ201504T using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7269914
title: Additional file 4: of Long non-coding RNAs have age-dependent diurnal expression that coincides with age-related changes in genome-wide facultative heterochromatin

description: Diurnally expressed genes at 4Â months. (XLSX 24Â kb)
DOI: 10.6084/m9.figshare.7269914.v1
title: Additional file 4: of Long non-coding RNAs have age-dependent diurnal expression that coincides with age-related changes in genome-wide facultative heterochromatin

description: Diurnally expressed genes at 4Â months. (XLSX 24Â kb)
DOI: 10.7284/115694
title: Gyrocompass data collected during research cruise SKQ201504T using a Sperry NAVIGAT 2100 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115686
title: INS (Inertial Navigation System) data collected during research cruise SKQ201504T using a Kongsberg Seapath 320+ instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition