cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4675674
title: LT-Brazil: A database of leaf traits across biomes and vegetation types in Brazil

description: The LT-Brazil data set contains observations of leaf mass per area, leaf N and P concentration per unit mass, and leaf N:P ratio from native woody species across the Brazilian territory, encompassing information of biome, vegetation, taxonomic data, geographical coordinates, climatic parameters, as well as soil properties. We compiled data from 227 sites in native vegetation distributed across all biomes (<em>i.e.</em>, Amazônia, Caatinga, Cerrado, Mata Atlântica, Pampa, and Pantanal) found in Brazil. Our compilation was focused on native woody plants (<em>i.e.</em>, trees, shrubs, subshrubs, and lianas), excluding monocots, palm trees, herbs, and hemiparasitic plants. The compiled data set covers ~9% of woody angiosperm species of Brazil. Unidentified or mixed species were also considered when met our eligibility criteria. Contributions to expand this database can be performed through our repository at GitHub (https://github.com/emariano-git/lt-brazil.git). Major versions of the LT-Brazil data set will also be made available via the TRY Plant Trait Database (https://www.try-db.org).
description: This work was funded by the Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP; grant #2011/50384-4, #2013/09800-0, #2015/18790-3, and #2015/50488-5). The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported here.
DOI: 10.15468/sqz57c
title: A new apterous rove beetle genus (Coleoptera: Staphylinidae) from the Northern Andes with an assessment of its phylogenetic position

description: This dataset contains the digitized treatments in Plazi based on the original journal article Chatzimanolis, Stylianos, Brunke, Adam J. (2021): A new apterous rove beetle genus (Coleoptera: Staphylinidae) from the Northern Andes with an assessment of its phylogenetic position. European Journal of Taxonomy 744: 67-82, DOI: https://doi.org/10.5852/ejt.2021.744.1303, URL: http://dx.doi.org/10.5852/ejt.2021.744.1303
DOI: 10.5281/zenodo.4675690
title: Archivo .csv con los precios diarios del supermercado DIA

description: Archivo .csv con los precios de todos los productos del supermercado DIA, a fecha de 9 de abril de 2021.
DOI: 10.5281/zenodo.4675689
title: Archivo .csv con los precios diarios del supermercado DIA

description: Archivo .csv con los precios de todos los productos del supermercado DIA, a fecha de 9 de abril de 2021.
DOI: 10.5281/zenodo.4675741
title: Determinants of the Lifestyle Changes during COVID-19 Pandemic in the Residents of Northern Italy

description: survey through a questionnaire, on lifestyle changes during lockdown for Covid 19
DOI: 10.5281/zenodo.4675740
title: Determinants of the Lifestyle Changes during COVID-19 Pandemic in the Residents of Northern Italy

description: survey through a questionnaire, on lifestyle changes during lockdown for Covid 19
DOI: 10.14469/hpc/8072
title: OpenFOAM Implementation of a model for the isobaric evaporation of pure cryogenic liquids

description: Supplementary Material for the research article "CFD modelling of the isobaric evaporation of cryogenic liquids in storage tanks" by Felipe Huerta and Velisa Vesovic.
DOI: 10.6084/m9.figshare.13308539
title: Behavioral impacts on residential food provisioning, use, and waste during the COVID-19 pandemic

description: This data set contains data and outputs from a study on COVID-19 impacts to residential food purchase, use, and waste in New York State in 2020. The data set includes includes raw data collected via a consumer survey, coding scheme and coded data, and R scripts used for data analysis. <br>A README file is provided to explain the contents and use of each document.<br>
DOI: 10.6084/m9.figshare.13308539.v1
title: Behavioral impacts on residential food provisioning, use, and waste during the COVID-19 pandemic

description: This data set contains data and outputs from a study on COVID-19 impacts to residential food purchase, use, and waste in New York State in 2020. The data set includes includes raw data collected via a consumer survey, coding scheme and coded data, and R scripts used for data analysis. <br>A README file is provided to explain the contents and use of each document.<br>
DOI: 10.6084/m9.figshare.14394629
title: Dataset 16. ¿Cómo se aplicó los métodos de investigación?

description: Resultados de 36 artículos.
DOI: 10.6084/m9.figshare.14394629.v1
title: Dataset 16. ¿Cómo se aplicó los métodos de investigación?

description: Resultados de 36 artículos.
DOI: 10.15468/2t7e7z
title: Diversity and distribution of marine Gastrotricha along the northern beaches of the state of São Paulo (Brazil), with description of a new species of Macrodasys (Macrodasyida, Macrodasyidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Todaro, M. Antonio, Rocha, Carlos E. F. (2004): Diversity and distribution of marine Gastrotricha along the northern beaches of the state of São Paulo (Brazil), with description of a new species of Macrodasys (Macrodasyida, Macrodasyidae). Journal of Natural History 38 (13): 1605-1634, DOI: 10.1080/0022293031000156169, URL: http://dx.doi.org/10.1080/0022293031000156169
DOI: 10.5281/zenodo.4675608
title: A historical tree-ring chronology for the east of the Netherlands and northwest of Germany

description: Here we provide a historical tree-ring chronology representing wood likely sourced in the east of the Netherlands and/or the northwest of Germany (Münster area). The files included are the following: NLEDNW01_39 underlying measurements: FH file containing the 39 raw tree-ring series underlying the chronology, and the raw chronology itself. NLEGNW01: the raw chronology in Tucson format Meta data 39 series in chronology Crossdating NLEGNW01 with regional chonos Table 1: crossdating results obtained with PAST (SCIEM). NLG39COF: text file presenting the COFECHA output NLEGNW01.rwl_out: text file presenting ARSTAN output (a 32y smoothing spline has been used to compute the chronologies). Graphs rbar_EPS: descriptive graphs produced by ARSTAN.
description: Output of Wood for Goods project, funded by the Nederlandse Organisatie voor Wetenschappelijk Onderzoek (016.Veni.195.502)
DOI: 10.5281/zenodo.4638952
title: Genome Annotation Workshop 2021 - Test data

description: Test datasets for the <strong>Genome Annotation Workshop 2021</strong>
DOI: 10.5517/ccdc.csd.cc25dgsv
title: CCDC 2007987: Experimental Crystal Structure Determination

description: Related Article: Helena Montes-Andrés, Pedro Leo, Gisela Orcajo, Antonio Rodríguez-Diéguez, Duane Choquesillo-Lazarte, Carmen Martos, Juan Ángel Botas, Guillermo Calleja|2020|Cryst.Growth Des.|20|6707|doi:10.1021/acs.cgd.0c00857
DOI: 10.5517/ccdc.csd.cc26xpqk
title: CCDC 2053369: Experimental Crystal Structure Determination

description: Related Article: Simon Schmitz|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26xprl
title: CCDC 2053370: Experimental Crystal Structure Determination

description: Related Article: Simon Schmitz|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26xpsm
title: CCDC 2053371: Experimental Crystal Structure Determination

description: Related Article: Simon Schmitz|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26yhd2
title: CSD 2054134: Experimental Crystal Structure Determination

description: Related Article: T. Yamanaka, Y. Komatsu, H. Nomori|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc26yhg4
title: CSD 2054136: Experimental Crystal Structure Determination

description: Related Article: T. Yamanaka, Y. Komatsu, H. Nomori|2021|CSD Communication|||
DOI: 10.6084/m9.figshare.14387909.v1
title: Supplementary Tables

description: Whole exome-sequencing (WES) data from the case of a Moroccan girl with a phenotype within the clinical spectrum of both Hallermann-Streiff (HSS, OMIM 234100) and Oculodentodigital Dysplasia (ODDD, OMIM 164200) syndromes. <br>Several clinical features of ODDD overlap those of HSS and may confuse diagnosis, considering that the inheritance of HSS is not described yet. The diagnostic odyssey of this patient ended with the identification by exome sequencing of a novel homozygous alteration in the GJA1 gene. A missense substitution in exon 2 (Chr6(GRCh37): g.121768554C&gt;G 561 561 NM_000165.4: c.561C&gt;G p.Cys187Trp) was identified by WES, suggesting a diagnosis of ODDD.<br>Parents gave written informed consent for the transfer of clinical data in D4/phenodent database (www.phenodent.org), genetic testing (GenoDENT) and DNA biobanking (https://clinicaltrials.gov: NCT01746121 et NCT02397824; DC-2012-1677 et DC-2012-1002), and the current publication.<br><br><br>
DOI: 10.5519/qd.ztq0tkk0
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4773588 records)
DOI: 10.21227/pjpt-nk47
title: Supplementary Material for "Spreading of Disturbances in Realistic Models of Transmission Grids: Dependence on Topology, Inertia and Heterogeneity"
DOI: 10.25810/22ac-jx56
title: Toward Entrainment Thresholds in Fluvial Plucking - Data 

description: 

            The data in this repository were generated using COMSOL Multiphysics 5.5 CFD package. The files are in .dat format for u-component velocities, pressures, and location of the zero-pressure contour line. Each file includes a heading describing the run-file used and date/time and labels for each column of data. Additionally, a .xlsx file contains the data used for the calculations of forces and stresses on blocks.
DOI: 10.3886/e119446v79
title: COVID-19 US State Policy Database

description: For questions or comments about the database please contact:<br>Alexandra Skinner <br>skinnera@bu.edu <br>Research Fellow & Database Manager<br>Department of Health Law, Policy & Management <br>Boston University School of Public Health<br><br>Database of state policies on closures, shelter-in-place orders, housing protections, changes to Medicaid and SNAP, physical distancing closures, reopening, and more created by researchers at the Boston University School of Public Health. Policies included are state-wide directives or mandates, not guidance or recommendations. In order for a policy to be included, it must apply to the entire state. We are working quickly to go through state government websites to make the policy database as complete and accurate as possible in a rapidly changing policy context. If you use data on a given policy, we encourage you to triangulate based on additional sources of policy data and to review the source documentation to consider the coding decisions that are right for your work. Of course, please email us if you note a discrepancy so we can improve the database for everyone. State policy source documentation can be found at: tinyurl.com/statepolicysources.
description: State policies. Smallest Geographic Unit: State
description: other; Contributors: Megan Cole Brahim, Noa Krawczyk, Carolyn Hoffman, Claire Corkish, Elizabeth Ferrara, Elizabeth Long, Emily Baroni, Faith Contador, Hannah Simon, Morgan Simko, Rachel Scheckman, Sarah Brewer, Sue Kulkarni, Felicia Heykoop, Manish Patel, Aishwarya Vidyasagaran, Andrew Chiao, Cara Safon, Samantha Burkhart, Harry Jung, Victor Lee, Marina MacKinnon, Aarohi Rede, Marie Vearling, Sophie Li, Christina Wang, Tim Levengood, María Jordán P. Emma Chistolini
DOI: 10.6084/m9.figshare.14394704
title: Staphylococcus aureus viewed from the perspective of 40,000+ genomes - Sample Table

description: This is an export of the Staphopia V1 "Samples" table.<br>Please use the Staphopia R Package (https://www.github.com/staphopia/staphopia-r) to take advantage of the Staphopia API to access the database.
DOI: 10.5281/zenodo.4676243
title: data-Agulha-with-AtPr

description: Interpolated data with A pressure
DOI: 10.25387/g3.14080361
title: Supplemental Material for Grover et al., 2021

description: Supplemental datasets for the <i>Gossypium stocksii </i>genome analyses
DOI: 10.25387/g3.14080361.v1
title: Supplemental Material for Grover et al., 2021

description: Supplemental datasets for the <i>Gossypium stocksii </i>genome analyses
DOI: 10.5281/zenodo.4676263
title: ExaHyPE-tsunami output

description: HdF5 output of the ExaHyPE tsunami simulation and postprocessing script.
DOI: 10.5281/zenodo.4676262
title: ExaHyPE-tsunami output

description: HdF5 output of the ExaHyPE tsunami simulation and postprocessing script.
DOI: 10.5281/zenodo.4676268
title: Agulha data without At pressure

description: data without At pressure 25s-65s; 0w-60w
DOI: 10.17632/9z95ygk3s2.1
title: Supplementary figure S2. Metabolomics in calves

description: Supplementary Figure S2. Summary of mean (A) crude protein intake (g/d) and (B) fat intake (kg/d) of dairy calves (n = 86) fed a restricted (red) or an elevated (blue) level of nutrient intake.
DOI: 10.17632/dr9kxs8yc8.1
title: Data for: Chemical nature of hydrothermal fluids generated by serpentinization and carbonation of komatiite: Implications for H2-rich hydrothermal system and ocean chemistry in the early Earth

description: Dataset of hydrothermal experiments simulating oceanic hydrothermal systems. Table 1: Main composition of run products after experiment (wt.%) in Exp-100 and Exp-300 the synthetic komatiite, mineral/glass phases therein, starting materials. Table 2: Composition of the sampled fluids in the experiments (mmol/kg). Table 3:Measured chemical compositions of hydrothermal fluids (mM) in natural hydrothermal systems and hot spring. Table 4: H2 flux estimation in modern and early Earth.
DOI: 10.17632/wb7v54r2p4.1
title: Supplementary figure S1. Metabolomics in calves

description: Summary of mean water intake (L/d) of dairy calves (n = 86) fed a restricted (red) or an elevated (blue) level of nutrient intake.
DOI: 10.17632/3yg3bpkz4f.1
title: Supplementary Figure S2 - typical excretion curves - JDS19932

description: Supplementary Figure S2. Typical excretion curves of individual calf observations. The measured concentrations of Co (upper panel), Yb (middle panel), and Cr (lower panel) in feces with the fitted curve using the generalized Michaelis-Menten equation, as proposed by López et al. (2000).
DOI: 10.17632/5vzt4f9g3x.1
title: Supplemental Material: Assessing effects of dietary and milking frequency changes and injection of cabergoline during dry-off on hunger in dairy cows using 2 feed thwarting tests

description: We investigated the effects of dietary and milking frequency changes during a week before dry-off, as well as injection of cabergoline (dopamine agonist) after the last milking, on the feeding motivation in dairy cows using 2 feed thwarting test paradigms. Reducing feeding level, either before or on the dry-off day, resulted in behavioral changes indicative of hunger while no clear effect of reduced milking frequency was found. The effects of cabergoline on feeding motivation were unclear and deserve further investigation. The present study titled "Assessing effects of dietary and milking frequency changes and injection of cabergoline during dry-off on hunger in dairy cows using 2 feed thwarting tests" and published in Journal of Dairy Science was conducted from September 2017 to May 2019 at the Danish Cattle Research Centre, Aarhus University, Denmark. This study was part of a large project investigating the effects of dry-off management on performance, metabolism and welfare of dairy cows, as described in detail by Larsen et al. (unpublished data). All procedures involving animals were approved by the Danish Animal Experiments Inspectorate in accordance with the Danish Ministry of Justice Act No. 1306 (November 23, 2007), approval number 2017-15-0201-01230. The experimental protocol (internal ref. F19-12-1919) was registered in the experimental facility data storage system at Aarhus University. The experimental work was conducted according to Good Clinical Practice Guideline VICH GL19 (VICH, 2001) and the study as well as the unregistered use of cabergoline (Velactis, Ceva Santé Animale, Libourne, France) was approved by the Danish Medical Agency (Permit No. 2017064040). In countries where Velactis is registered, Velactis is labelled to be used with abrupt dry-off, e.g. no reduction in feeding level or milking frequency prior to the last milking. Use in other dry-off regimens is off-label. This supplemental material contains the following information: 1. Breakdown on the number of cows across treatments (feeding level × milking frequency × type of injection) included in the study and used in tests A (thwarting test in the home pen) and B (thwarting test with concentrate). 2. Analysis of the relationship between the feed delivery duration and frequencies of attempts to feed and vocalizations, as well as latency to feed within 300 s, recorded during the feed thwarting test in the home pen (Test A) 3. Breakdown on the number of vocalizations during Test A across treatments and over days relative to dry-off 4. Breakdown on the number of behaviors directed towards each of the boxes on each test day (Test B) 5. Layout of the experimental home pen where experimental cows were housed between day -7 and day 7 relative to the dry-off day 6. Layout of the test pen used for the feed thwarting test with concentrate 7. Plastic boxes used in the feed thwarting test with concentrate
DOI: 10.17632/fbx4rg5wvc.1
title: K voprosu o yazykovyh raznovidnostyah

description: Yazyk predstavlyaet soboj podvizhnuyu sistemu i podobno vsyakomu zhivomu organizmu sposoben reagirovat' na izmenenie okruzhayushchih uslovij. Pod yazykom sleduet ponimat' nekuyu global'nuyu, nacional'no negomogennuyu, abstraktnuyu sistemu, kotoraya na praktike voploshchaetsya v vide variantov i dialektov. Lyuboj zhivoj yazyk social'no obuslovlen i ispytyvaet vliyanie lic, govoryashchih na nem. Imeet smysl rassmatrivat' yazyk v vide sovokupnosti ego raznovidnostej.
DOI: 10.17632/fnpwzj37gw.4
title: Dense sampling of bird diversity increases power of comparative genomics

description: Data accompanying the manuscript "Dense sampling of bird diversity increases power of comparative genomics" In Nature releasing of 267 bird genomes as part of the Bird 10,000 Genome Project (B10K), in addition to orthology assignments and analyses on a total of 363 genomes. The dataset includes - Extended Data Figures. Zoomable PDFs for some Extended Data Figures 2e, 3, 6, 7c, 8a with tip labels; gene tree file for GH orthologs shown in Extended Data Figure 6. - Supplementary Tables 1 to 15. Captions are given in supplementary_table_captions.txt. Tables can be downloaded individually or as a package (supplementary_tables.zip). Sample information for each genome and genome statistics (Supplementary Table 1) can also be viewed online at https://b10k.scifeon.cloud/. - B10K_name_map.xls. Allows translation of B10K sample codes, short 6 letter codes used in ortholog annotations and species latin name. - Supplementary File 2. The tree file in newick format for all 10,135 species of birds. The tree was pruned from the synthesis tree by excluding all subspecies, operational taxonomic units and unaccepted species as described in Supplementary File 1.
DOI: 10.17632/nrxxg2z3zd.1
title: Sovremennye tendencii yuridicheskogo diskursa (na primere USA i Kanady)

description: V stat'e analiziruyutsya sovremennye tendencii v anglijskom yuridicheskom diskurse USA i Kanady.
DOI: 10.17632/hptxjdjss6.1
title: Generalized Predictions of Particle-Vane Retention Probability in Gas Turbine Engines

description: Data pertaining to Figures 4 and 5 from the paper. Figure datasets are contained in separate worksheets in workbook.
DOI: 10.17632/kddjgvbrhj.2
title: Fine scale assemblage structure of benthic invertebrate megafauna on the North Pacific seamount Mokumanamana

description: Raw and standardized counts of benthic invertebrates from the Northwestern Hawiian seamount Mokumanamana from AUV still images. This data is structured to compare invertebrate communities between depths and sides of a single deep-sea feature. One side has more depth bins counted than the other two, due to analysis that found every 50 m of depth was not necessary to see differences in community.. Standardized counts are divided by the number of images in each transect. Also included are two sets of R code for all analyses done in R, one for the S362 with more depth bins, and one for the whole of the seamount at the same depths.
DOI: 10.25345/c5qn5g
title: MassIVE MSV000087170 - Direct interaction of tyrosyl DNA phosphodiesterase 1 with DNA ligase III catalytic domain is regulated by phosphorylation of its flexible N-terminus
title: Tyrosyl DNA phosphodiesterase 1 (TDP1) and DNA Ligase III (LigIII) are key enzymes in nuclear and mitochondrial single-strand break (SSB) repair pathways whereby TDP1 removes the 3-tyrosine residue remaining after degradation of a trapped DNA topoisomerase 1. Here we define a direct interaction between TDP1 catalytic domain and LigIII DNA binding domain (DBD) that is regulated by conformational changes in the unstructured TDP1 N-terminal region induced by phosphorylation and/or alterations in amino acid sequence. Full-length and N-terminally truncated TDP1 are more effective at correcting the defect in SSB repair of TDP1 null cells compared with full-length TDP1 with amino acid substitutions of an N-terminal serine residue that is phosphorylated in response to DNA damage. TDP1 forms a stable complex with LigIII170-755, full-length LigIII as well as full-length LigIII alone and in complex with XRCC1. Homodimerization of LigIII BRCT domains links two LigIII-TDP1 heterodimers. Small angle X-ray scattering and negative stain electron microscopy combined with mapping of the interacting regions, identify a TDP1/LigIII compact dimer of heterodimers in which the two LigIII catalytic cores are positioned in the center, whereas two TDP1 molecules are located at the edges of the core complex formed by the LigIII DBD and the TDP1 catalytic domain flanked by highly flexible regions that can interact with other repair proteins and the SSB. As TDP1- LigIII repairs adducts caused by TOP1 cancer chemotherapy inhibitors, the defined interaction architecture and regulation informs on how this enzyme complex functions and is regulated in non-malignant and cancer cells.
DOI: 10.17632/mvc62cw7j3.1
title: Paraspeckles-Mediated Control of Cancer Metabolism by Nutrient-mTORC1 Signaling

description: Paraspeckles are distinct nuclear bodies formed by polymerization of the lncRNA NEAT1 with the RNA-binding proteins NONO and SFPQ. Despite recent advances in understanding the biogenesis and structural organization of paraspeckles, their function and regulation in response to changing cellular environments remain poorly understood. Herein we report identification of NEAT1 as a transcriptional target of mTORC1. Upon oncogenic activation, mTORC1 binds to NEAT1 promoter, thereby repressing NEAT1 transcription and suppressing paraspeckle biogenesis in response to nutrient and mitogenic signals. Functionally, mTORC1 suppression of paraspeckle formation liberates NONO, which in turn, binds to U5 spliceosome and enhances splicing of key glycolytic genes and aerobic glycolysis, promoting cancer cell growth in vitro and tumor development in vivo. Furthermore, this paraspeckle-mediated mechanism is important for the anticancer action of rapamycin/temsirolimus. Collectively, these findings reveal a function of nuclear paraspeckles in controlling cancer metabolism and mediating the anticancer responses of mTORC1-targeted agents.
DOI: 10.17632/4v7cb245sm.1
title: Raw data-Breast implant associated anaplastic large cell lymphoma (BIA-ALCL): a challenging cytological diagnosis with hybrid PET/MRI staging and follow-up

description: Research data of the exams
DOI: 10.17632/k7hvtmk9nh.1
title: Raw data-miR-622 is a novel potential biomarker of breast carcinoma and impairs motility of breast cancer cells through targeting NUAK1 kinase

description: Research data of the work