cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7111539
title: papilio_memnon_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111558
title: danaus_melanippus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111557
title: danaus_melanippus_zanfona_1.fasta.gz

description: .
DOI: 10.34740/kaggle/dsv/4248182
title: Mahanagar Yatayat Dataset
DOI: 10.5281/zenodo.7111552
title: A phenomenological law for complex granular materials from Mohr-Coulomb theory

description: The compressed directory contains the data in .csv format used for the PCA analysis for each dataset (1, 2 and 3).
description: Dataset 2 gathers other publications' information
DOI: 10.5281/zenodo.7111551
title: A phenomenological law for complex granular materials from Mohr-Coulomb theory

description: The compressed directory contains the data in .csv format used for the PCA analysis for each dataset (1, 2 and 3).
description: Dataset 2 gathers other publications' information
DOI: 10.5281/zenodo.7111564
title: papilio_polyxenes_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111563
title: papilio_polyxenes_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111331
title: Dataset: Auditory brainstem responses to varying stimulus presentation rates of 12 bat species in the wild and captivity

description: Dataset for the Dataset Publication: Auditory brainstem responses to varying stimulus presentation rates of 12 bat species in the wild and captivity There are two datasets available: 1) the measured ABRs from Experiments 1 and 2 and 2) the extracted IOIs: ABR measurements: The filename of the ABR recordings from Experiment 1 include the species name, individual ID, sex, stimulus presentation rate (indicated as “modrate”) and recording day and time (yyyyddmm). Each recording file contains 256 measurements of the same stimulus and stimulus presentation rate in columns. An exemplary filename would be “Carollia_perspicillata_cp6male_modrate6_20190905T125903”, meaning that this is a recording of <em>Carollia perspicillata</em> individual cp6 of sex male, tested with a stimulus presentation rate of 6 Hz on the 09.05.2019, and the file was saved at 12:59:03 (the T between date and time stands for “Time”). The filename of the ABR recordings from Experiment 2 include the place of the Experiments (Bad Segeberg) and species name (<em>C. perspicillata</em>), individual ID, sex, stimulus presentation rate (indicated as “modrate”) and recording day and time (yyyymmdd; be aware, that the date format is different between Experiment 1 and 2). Each recording file contains 256 measurements of the same stimulus and stimulus presentation rate in columns. An exemplary filename would be “BadSegeberg_cper_1_male_modrate6_20200622T140952_stimulus_ST01_short ”, meaning that this is a recording of <em>Carollia perspicillata</em> individual cp6 of sex male, tested with a stimulus presentation rate of 6 Hz on the 09.05.2019, and the file was saved at 12:59:03 (the T between date and time stands for “Time”), the individual was presented with stimulus example 01 of the short stimuli. IOI recordings The recordings of Inter-Onset-Intervals are all in one single csv file and species and sequence ID is given per row, to be able to analyze the data further.
DOI: 10.5281/zenodo.7111330
title: Dataset: Auditory brainstem responses to varying stimulus presentation rates of 12 bat species in the wild and captivity

description: Dataset for the Dataset Publication: Auditory brainstem responses to varying stimulus presentation rates of 12 bat species in the wild and captivity There are two datasets available: 1) the measured ABRs from Experiments 1 and 2 and 2) the extracted IOIs: ABR measurements: The filename of the ABR recordings from Experiment 1 include the species name, individual ID, sex, stimulus presentation rate (indicated as “modrate”) and recording day and time (yyyyddmm). Each recording file contains 256 measurements of the same stimulus and stimulus presentation rate in columns. An exemplary filename would be “Carollia_perspicillata_cp6male_modrate6_20190905T125903”, meaning that this is a recording of <em>Carollia perspicillata</em> individual cp6 of sex male, tested with a stimulus presentation rate of 6 Hz on the 09.05.2019, and the file was saved at 12:59:03 (the T between date and time stands for “Time”). The filename of the ABR recordings from Experiment 2 include the place of the Experiments (Bad Segeberg) and species name (<em>C. perspicillata</em>), individual ID, sex, stimulus presentation rate (indicated as “modrate”) and recording day and time (yyyymmdd; be aware, that the date format is different between Experiment 1 and 2). Each recording file contains 256 measurements of the same stimulus and stimulus presentation rate in columns. An exemplary filename would be “BadSegeberg_cper_1_male_modrate6_20200622T140952_stimulus_ST01_short ”, meaning that this is a recording of <em>Carollia perspicillata</em> individual cp6 of sex male, tested with a stimulus presentation rate of 6 Hz on the 09.05.2019, and the file was saved at 12:59:03 (the T between date and time stands for “Time”), the individual was presented with stimulus example 01 of the short stimuli. IOI recordings The recordings of Inter-Onset-Intervals are all in one single csv file and species and sequence ID is given per row, to be able to analyze the data further.
DOI: 10.5281/zenodo.7111576
title: hypolimnas_misippus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111575
title: hypolimnas_misippus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111566
title: FOLFOXIRI resistance induction and characterization in human colorectal cancer cells

description: Supplementary dataset to "FOLFOXIRI resistance induction and characterization in human colorectal cancer cells"
DOI: 10.5281/zenodo.7111565
title: FOLFOXIRI resistance induction and characterization in human colorectal cancer cells

description: Supplementary dataset to "FOLFOXIRI resistance induction and characterization in human colorectal cancer cells"
DOI: 10.6084/m9.figshare.20489508
title: The ecological role of the plastisphere in the Mediterranean Sea: are epiplastic organisms potentially increasing Nitrogen fixation?

description: Nitrogen fixation potential of cyanobacteria within the plastisphere in the Mediterranean Sea
DOI: 10.6084/m9.figshare.20489508.v3
title: The ecological role of the plastisphere in the Mediterranean Sea: are epiplastic organisms potentially increasing Nitrogen fixation?

description: Nitrogen fixation potential of cyanobacteria within the plastisphere in the Mediterranean Sea
DOI: 10.34740/kaggle/dsv/4248299
title: Tales from the Pizza Guy
DOI: 10.6084/m9.figshare.21202778
title: data.zip

description: GSE67487 and GSE51024
DOI: 10.6084/m9.figshare.21202778.v1
title: data.zip

description: GSE67487 and GSE51024
DOI: 10.34740/kaggle/dsv/4248220
title: Youtube Data Science Channels Comments
DOI: 10.15468/7zy3gn
title: A Checklist of Ornamental plants in the Lagos State Parks and Gardens Agency, Lagos, Nigeria

description: This is a checklist of ornamental plants growing in the nursery of the Lagos State Parks and Gardens Agency, Lagos, Nigeria.
DOI: 10.5281/zenodo.7111646
title: neptis_clinioides_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111645
title: neptis_clinioides_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111656
title: Solid-sorbent direct air capture global performance data

description: Global performance data for solid-sorbent direct air capture utilizing amine-functionalized sorbent (i.e., Lewatit VP OC 1065) in a steam-assisted vacuum-pressure temperature swing adsorption cycle.
DOI: 10.5281/zenodo.7111655
title: Solid-sorbent direct air capture global performance data

description: Global performance data for solid-sorbent direct air capture utilizing amine-functionalized sorbent (i.e., Lewatit VP OC 1065) in a steam-assisted vacuum-pressure temperature swing adsorption cycle.
DOI: 10.34740/kaggle/ds/2503459
title: Rental Porperties Listed in Idealista (Spain)
DOI: 10.5281/zenodo.7111660
title: doxocopa_laurentia_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111659
title: doxocopa_laurentia_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111667
title: taenaris_catops_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111666
title: taenaris_catops_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111658
title: Cross-species gRNA-design

description: This dataset contains all scripts and data files required to run the <em><strong>Cross-species gRNA design </strong></em>shiny<em><strong> </strong></em>app created for the Perturb-seq project of the Hellmmann-Enard Lab. As part of this project, we plan to perturb a selection of transcription factors (TFs) using single-cell CRISPRi screens in primate iPS cells, infer gene regulatory networks (GRNs) based on the outcome of the perturbations, then quantitatively compare these GRNs aross species. During the experimental design, we selected TFs based on previous data that might be interesting to perturb and designed single-guide RNAs (gRNAs) to target them in the human and cynomolgus macaque genomes. The app aims to present all information about the TF selection and gRNA design in a structured and interactive manner.
DOI: 10.5281/zenodo.7111657
title: Cross-species gRNA-design

description: This dataset contains all scripts and data files required to run the <em><strong>Cross-species gRNA design </strong></em>shiny<em><strong> </strong></em>app created for the Perturb-seq project of the Hellmmann-Enard Lab. As part of this project, we plan to perturb a selection of transcription factors (TFs) using single-cell CRISPRi screens in primate iPS cells, infer gene regulatory networks (GRNs) based on the outcome of the perturbations, then quantitatively compare these GRNs aross species. During the experimental design, we selected TFs based on previous data that might be interesting to perturb and designed single-guide RNAs (gRNAs) to target them in the human and cynomolgus macaque genomes. The app aims to present all information about the TF selection and gRNA design in a structured and interactive manner.
DOI: 10.5281/zenodo.7111679
title: Skew Surges

description: Supplementary data set of the paper: Marcos, M. and Woodworth, P.L. 2017. Spatio-temporal changes in extreme sea levels along the coasts of the North Atlantic and the Gulf of Mexico. Journal of Geophysical Research Oceans, 122, doi:10.1002/2017JC013065. The file contains the skew surges computed for all tide gauge records in GESLA2 data base, as described in the above publication.
description: {"references": ["Marcos, M. and Woodworth, P.L. 2017. Spatio-temporal changes in extreme sea levels along the coasts of the North Atlantic and the Gulf of Mexico. Journal of Geophysical Research Oceans, 122, doi:10.1002/2017JC013065."]}
DOI: 10.5281/zenodo.7111678
title: Skew Surges

description: Supplementary data set of the paper: Marcos, M. and Woodworth, P.L. 2017. Spatio-temporal changes in extreme sea levels along the coasts of the North Atlantic and the Gulf of Mexico. Journal of Geophysical Research Oceans, 122, doi:10.1002/2017JC013065. The file contains the skew surges computed for all tide gauge records in GESLA2 data base, as described in the above publication.
description: {"references": ["Marcos, M. and Woodworth, P.L. 2017. Spatio-temporal changes in extreme sea levels along the coasts of the North Atlantic and the Gulf of Mexico. Journal of Geophysical Research Oceans, 122, doi:10.1002/2017JC013065."]}
DOI: 10.6084/m9.figshare.20338536.v6
title: TNBC Data from Wu et al, 2021

description: Anndata format of the TNBC data set generated by Wu et al, 2021, together with inferred cytokine activity, as described in Dimitrov et al, 2022.<br> <br> <br> Wu, S.Z., Al-Eryani, G., Roden, D.L., Junankar, S., Harvey, K., Andersson, A., Thennavan, A., Wang, C., Torpy, J.R., Bartonicek, N. and Wang, T., 2021. A single-cell and spatially resolved atlas of human breast cancers. <em>Nature genetics</em>, <em>53</em>(9), pp.1334-1347.<br> <br> Dimitrov, D., Türei, D., Garrido-Rodriguez, M., Burmedi, P.L., Nagai, J.S., Boys, C., Ramirez Flores, R.O., Kim, H., Szalai, B., Costa, I.G. and Valdeolivas, A., 2022. Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data. <em>Nature Communications</em>, <em>13</em>(1), pp.1-13.
DOI: 10.5281/zenodo.7111691
title: callinectes_sapidus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111690
title: callinectes_sapidus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111702
title: octopus_rubescens_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111701
title: octopus_rubescens_zanfona_1.fasta.gz

description: .
DOI: 10.6084/m9.figshare.20338536
title: TNBC Data from Wu et al, 2021

description: Anndata format of the TNBC data set generated by Wu et al, 2021, together with inferred cytokine activity, as described in Dimitrov et al, 2022.<br> <br> <br> Wu, S.Z., Al-Eryani, G., Roden, D.L., Junankar, S., Harvey, K., Andersson, A., Thennavan, A., Wang, C., Torpy, J.R., Bartonicek, N. and Wang, T., 2021. A single-cell and spatially resolved atlas of human breast cancers. <em>Nature genetics</em>, <em>53</em>(9), pp.1334-1347.<br> <br> Dimitrov, D., Türei, D., Garrido-Rodriguez, M., Burmedi, P.L., Nagai, J.S., Boys, C., Ramirez Flores, R.O., Kim, H., Szalai, B., Costa, I.G. and Valdeolivas, A., 2022. Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data. <em>Nature Communications</em>, <em>13</em>(1), pp.1-13.
DOI: 10.6084/m9.figshare.20338536.v7
title: TNBC Data from Wu et al, 2021

description: Anndata format of the TNBC data set generated by Wu et al, 2021, together with inferred cytokine activity, as described in Dimitrov et al, 2022.<br> <br> <br> Wu, S.Z., Al-Eryani, G., Roden, D.L., Junankar, S., Harvey, K., Andersson, A., Thennavan, A., Wang, C., Torpy, J.R., Bartonicek, N. and Wang, T., 2021. A single-cell and spatially resolved atlas of human breast cancers. <em>Nature genetics</em>, <em>53</em>(9), pp.1334-1347.<br> <br> Dimitrov, D., Türei, D., Garrido-Rodriguez, M., Burmedi, P.L., Nagai, J.S., Boys, C., Ramirez Flores, R.O., Kim, H., Szalai, B., Costa, I.G. and Valdeolivas, A., 2022. Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data. <em>Nature Communications</em>, <em>13</em>(1), pp.1-13.
DOI: 10.5281/zenodo.7111715
title: Papers 2022 . Research Group Pharmacology and Toxicology. University of Antioquia

description: Papers 2022 . Research Group Pharmacology and Toxicology. University of Antioquia
DOI: 10.5281/zenodo.7111714
title: Papers 2022 . Research Group Pharmacology and Toxicology. University of Antioquia

description: Papers 2022 . Research Group Pharmacology and Toxicology. University of Antioquia
DOI: 10.6084/m9.figshare.21202757
title: Mikolajewicz et al (2022) Communications Biology

description: Data and R code used to generate figures in Mikolaewicz et al. 2022. <br> Also see associated github repositories: https://github.com/NMikolajewicz/scMiko https://github.com/NMikolajewicz/scPipeline <br>
DOI: 10.5281/zenodo.7111725
title: micropterix_facetella_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7111724
title: micropterix_facetella_zanfona_1.fasta.gz

description: .
DOI: 10.34740/kaggle/dsv/3776654
title: Maritime Computer Vision - SeaDronesSee & MODS
DOI: 10.5281/zenodo.6847034
title: Supplementary Materials of Bacillus subtilis Protects the Ducks from Oxidative Stress Induced by Escherichia coli: Efficacy and Molecular Mechanism

description: Figure S1: The KEGG classification of DEGs; Table S1: Analysis composition of basal diets and nutrient level (air-dry basis, %); Table S2: Primers used for the RT-qPCR in this study.
DOI: 10.5281/zenodo.6847035
title: Supplementary Materials of Bacillus Subtilis Protects the Ducks from Oxidative Stress Induced by Escherichia coli: Efficacy and Molecular Mechanism

description: Table S1: Analysis composition of basal diets and nutrient level (air-dry basis, %); Table S2: Primers used for the RT-qPCR in this study; Table S3: The KEGG pathway enrichment analysis of DEGs; Figure S1: The KEGG classification of DEGs.
DOI: 10.5281/zenodo.7065008
title: Supplementary Materials of Bacillus Subtilis Protects the Ducks from Oxidative Stress Induced by Escherichia coli: Efficacy and Molecular Mechanism

description: Table S1: Analysis composition of basal diets and nutrient level (air-dry basis, %); Table S2: Primers used for the RT-qPCR in this study; Table S3: The KEGG pathway enrichment analysis of DEGs; Figure S1: The KEGG classification of DEGs.
DOI: 10.5281/zenodo.7110458
title: Supplementary Materials of Bacillus subtilis Protects the Ducks from Oxidative Stress Induced by Escherichia coli: Efficacy and Molecular Mechanism

description: Figure S1: The KEGG classification of DEGs; Table S1: Analysis composition of basal diets and nutrient level (air-dry basis, %); Table S2: Primers used for the RT-qPCR in this study.
DOI: 10.5281/zenodo.7111772
title: pagurus_longicarpus_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.7111771
title: pagurus_longicarpus_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.6084/m9.figshare.20406219
title: PG control_IR integrated seurat object

description: integrated Seurat v3 object with control and irradiated PG data
DOI: 10.6084/m9.figshare.20406219.v1
title: PG control_IR integrated seurat object

description: integrated Seurat v3 object with control and irradiated PG data
DOI: 10.3886/e104642v4-127940
title: 2016 Annual Survey of Refugees

description: Since the 1980s, the Office of Refugee Resettlement[1] (ORR) has conducted the Annual Survey of Refugees (ASR), which collects information on refugees during their first five years after arrival in the U.S. The ASR is the only scientifically-collected source of national data on refugees’ progress toward self-sufficiency and integration. ORR uses the ASR results alongside other information sources to fulfill its Congressionally-mandated reporting following the Refugee Act of 1980. Historically, the microdata from these surveys have generally been unavailable to researchers. <br> <br>In the Spring of 2017 ORR completed its 50th Annual Survey of Refugees (ASR). The data from the ASR offer a window into respondents’ first five years in the United States and shows the progress that refugee families made towards learning English, participating in the workforce, and establishing permanent residence. This public use data deposit is only for the 2016 ASR with future years likely to be added to the ICPSR archive.. <br> [1] The Office of Refugee Resettlement (ORR) at the Administration for Children and Families in the U.S. Department of Health and Human Services (HHS) serves refugees and other humanitarian entrants, including asylees, Cuban and Haitian entrants, Special Immigrant Visa holders, Amerasians, victims of human trafficking, and unaccompanied children. By providing these arrived populations with critical resources, ORR promotes their economic and social well-being. The Annual Survey of Refugees focuses solely on those refugees who have come to the U.S. in the past five fiscal years.
description: Household- and person-level analytic weights were developed for the 2016 ASR to allow for valid statistical estimates of the target refugee population. Both sets of weights are comprised of two components – a base weight reflecting the selection probability and an adjustment that corrects for differential nonresponse and aligns the population to known totals from the sampling frame (RADS universe file).
description: Response Rates: An overall response rate of 24 percent was achieved. The response rate was driven by the ability to locate and speak to (1500+468)/6176 = 32 percent of the sample, <b>meaning that two thirds of the sample could either not be located, or (if located) could </b> <b>not be successfully contacted. </b> <b> </b> The overall response rates decreased with time since arrival to the U.S., varying from 20 percent for FY 2011-2012 refugees to 25 percent for FY 2013-2014 refugees and a high of 31 percent for FY 2015 refugees.
description: The 2016 ASR employed a stratified probability sample design of refugees. The first stage of selection was the household (PA), and the second stage was the selection of persons within households.
description: Refugees aged 16 years old or over at the time of interview who arrived in the U.S. during FY 2011-2015 . Smallest Geographic Unit: Census region originally resettled in and the country of birth
description: telephone interview;
DOI: 10.6084/m9.figshare.3761562.v2352
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5517/ccdc.csd.cc2612v6
title: CCDC 2026837: Experimental Crystal Structure Determination

description: Related Article: Li Haohong, Lin Xiangling, Chen Zhirong|2021|U.S.Patents|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29fdw1
title: CCDC 2128053: Experimental Crystal Structure Determination

description: Related Article: Artur Mirocki, Artur Sikorski|2022|Materials|15|1518|doi:10.3390/ma15041518
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29fdx2
title: CCDC 2128054: Experimental Crystal Structure Determination

description: Related Article: Artur Mirocki, Artur Sikorski|2022|Materials|15|1518|doi:10.3390/ma15041518
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7093195
title: Dataset for Phase leads between oscillatory visual stimuli induce a salience illusion

description: This repository contains data and analysis code for
DOI: 10.25375/uct.14873202
title: Umoya omuhle: Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care: A whole systems approach. Research Questions 3 and 4_KwaZulu Natal.

description: The data collected formed part of the interdisciplinary, mixed methods project Umoya Omuhle: Infection Prevention and Control for Drug-Resistant Tuberculosis in South Africa in the Era of Decentralised Care: A Whole Systems Approach. The project is a collaboration between the Universities of Cape Town and Kwazulu-Natal, London School of Hygiene and Tropical Medicine and Queen Margaret University.
DOI: 10.25375/uct.14873202.v1
title: Umoya omuhle: Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care: A whole systems approach. Research Questions 3 and 4_KwaZulu Natal.

description: The data collected formed part of the interdisciplinary, mixed methods project Umoya Omuhle: Infection Prevention and Control for Drug-Resistant Tuberculosis in South Africa in the Era of Decentralised Care: A Whole Systems Approach. The project is a collaboration between the Universities of Cape Town and Kwazulu-Natal, London School of Hygiene and Tropical Medicine and Queen Margaret University.