cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/pg2stmsm27
title: Abiotic nitrogen reduction in a submarine hydrothermal system

description: Supplementary Table 1. Mineral assemblages of altered basalts and veins from IODP Hole U1502B.
Supplementary Table 2. Nitrogen concentration (ppm), δ15NAir (‰), major elements (wt%) and trace elements (ppm) of altered basalts and veins from IODP Hole U1502B.
Supplementary Table 3. Partition coefficients (KD ) between minerals and hydrothermal fluids.
Supplementary Table 4. Compilation of aqueous geochemical data for deep hydrothermal fluids.
DOI: 10.17632/s3y36j6rtc
title: Winery-2020-09

description: Winery built environment data
DOI: 10.17632/xvpsc8fkzx
title: Histopathological alterations, endothelial nitric oxide synthase (eNOS) and oxidative stress in placentas from women with intrahepatic cholestasis of pregnancy undergoing intracytoplasmic sperm injection as compared to natural conception

description: eNOS, oxidative stress and ICP
DOI: 10.17632/ys7f9g7k5h
title: LINF_230005400

description: peroxidoxin | tryparedoxin peroxidase | mTXNPx | PRX1M
Leishmania infantum (strain JPCM5)
DOI: 10.17632/2nvz3jb8pm
title: Supplementary data tables for the article titled "Dataset for analysis of metabolic pathways and their reversibility associated with anti-proliferative effect of metformin in liver cancer cells" (Data in Brief)

description: This is provided as a supplementary dataset related to article titled "Dataset for analysis of metabolic pathways and their reversibility associated with anti-proliferative effect of metformin in liver cancer cells". This data set contains tables of processed and filtered metabolomics data.
DOI: 10.17632/4kx94gb687
title: LINF_350038200

description: 60S ribosomal subunit protein L31; Leishmania infantum
DOI: 10.17632/5py4m2jtcw
title: Data for: Widespread poly-metamorphosed Archean granitoid gneisses and supracrustal enclaves of the southern Inukjuak domain, Québec (Canada)

description: Supplementary Data Tables S1-S3 and Figures S1-S7 for the manuscript Widespread poly-metamorphosed Archean granitoid gneisses and supracrustal enclaves of the southern Inukjuak domain, Québec (Canada) by Jennika Greer et al. (2020)
DOI: 10.17632/6tfvgsmj7h
title: Comparison of Relapse Rates Between Substance Use and Other Chronical Illness

description: Relapse rates for people treated for substance use disorders are compared with those for people treated for high blood pressure and asthma. Relapse is common and similar across these illnesses. Therefore, substance use disorders should be treated like any other chronic illness. Relapse serves as a sign for resumed, modified, or new treatment
DOI: 10.17632/bywsggk65r
title: IP Loop Algebraic Structures of order 7, 9, 11 and 13 with labelled classes

description: The dataset consists of IP loop algebraic structures of order 7, 9, 11 and 13 in matrix format along with their corresponding isomorphism classes. Each row represents a unique algebraic structure (as a matrix stored in row major format) satisfying the IP loop constraints. The isomorphism class of each algebraic structure is also labelled. The isomorphism classes were verified by using Nauty [1]. IP loop of order 13 dataset contains 7853368 (~8 million) algebraic structures with 10342 unique isomorphism classes. IP loop of order 11 dataset contains 6464 algebraic structures with 49 unique isomorphism classes. IP loop of order 9 dataset contains 64 algebraic structures with 7 unique isomorphism classes. IP loop of order 7 dataset contains 4 algebraic structures with 2 unique isomorphism classes.
DOI: 10.17632/jwk3yvryjs
title: Trajectory data of molecular dynamics simulation of SARS-CoV-2 RNA dependent RNA polymerase (RdRp, also named nsp12) and inhibitor drug candidates

description: MD simulations were performed using Desmond on supercomputer TSUBAME 3.0. The inhibitor-SARS-CoV-2 RdRp complex models were placed in the orthorhombic box with a buffer distance of 10 Å in order to create a hydration model. TIP3P water model was used for creation of the hydration model. We performed MD simulations under the NPT ensemble for 1 μs on three complex structures using OPLS3e force field.
DOI: 10.17632/nm45wtkt2k
title: 2019_Meathybrid
DOI: 10.17632/nxd99kn3wr
title: Bite Size data for leaf feeding

description: This shows the amount of leaf consumed in individual bites by parasitized and unparasitized caterpillars
DOI: 10.17632/rg8y7pyyzz
title: data in brief_γ-Tocotrienol Inhibits Cervical Cancer HeLa Cells Growth through Regulating the PI3K/AKT/mTOR Signaling Pathway

description: The file is a Data in Brief used by Xu et al study forγ-Tocotrienol Inhibits Cervical Cancer HeLa Cells Growth through Regulating the PI3K/AKT/mTOR Signaling Pathway in vitro. The data showed that γ-T3 (30-60 μM, especially at 45 μM) treatment significantly inhibited HeLa cellular proliferation, and its IC50 was 37.40 ± 5.70 µM at 48 hours. It induced apoptosis and increased the proportion of cells in G0/G1 phase and decreased the proportion at S phase in HeLa cells. The treatment decreased the levels of both phosphorylated and non-phosphorylated (+/-p) mTOR, upstream regulatory factors of PI3K, (+/-p) AKT, downstream regulatory factors of (+/-p) p70S6K, (+/-p) 4E-BP1 and targeted genes of Cyclin D1 and c-Myc related to HeLa cell proliferation and apoptosis. These eﬀects of γ-T3 on the HeLa cells were similar to the actions of Wortmannin (WM), a known blocker of the PI3K/AKT/mTOR signaling pathway. Furthermore, the combination of γ-T3 and WM displayed a strong synergistic effect. These results suggest that γ-T3 could inhibit cell growth by down-regulating the PI3K/AKT/mTOR signaling pathway in human cervical cancer HeLa cells.
DOI: 10.17632/rmbx4c9kpj
title: LDHU3_07.0480

description: Ring finger domain/Zinc finger - C3HC4 type (RING finger) containing protein
Leishmania donovani (HU3 strain)
DOI: 10.17632/wd257cgphp
title: Change in risk-taking behavior at the individual level - Time perspective and money illusion effect

description: Knowing the pattern of changes in risk preferences is important for studies of decision-making in financial choices. Moreover, relating it to Money illusion, which occupies an important position in variations of individuals’ risk preferences, might help to shape healthier consumers' portfolios. The aim of the research was to explore the relationship between people’s Time Perspectives and their differences in financial risk preferences and Money Illusion. The results of the study 1 (N1 = 108) revealed that, when individuals face forecasting information, Present Hedonistic and Future TP explain risky financial choices and Money Illusion. Additionally, only under inflation, people with a higher level of Past positive TP tend to prefer risky investments over safe investments. The results of study 2 (N2 = 105) showed that, when individuals face historical data, Past negative, Present Hedonistic and Present fatalistic TP play a role in explaining risky financial choices and Money illusion. Moreover, our results supported both studies that argued opposite effects of Money Illusion, which is about the changes in the individual's risk preferences; One study shows that inflation arouses an individual's risk aversion, while other studies show that inflation arouses an individual's risk-seeking. Our results show that the degree of individuals’ risk-seeking increased along with the score of the Present fatalistic TP, while the degree of individuals’ risk aversion increased along with the score of the Past negative TP. That is, whether people became risk-averse or risk-seeking along with inflation rate is depending on the profile of their Time Perspective.
DOI: 10.48765/8qwk-k125
title: Tumor-derived Interleukin-1α and Leukemia Inhibitory Factor promote extramedullary hematopoiesis

description: This dataset contains raw data supporting all figures and supplemental figures, except for single cell RNA sequencing data and serum cytokine profiling data, used in PLOS Biology paper, Tumor-derived interleukin-1α and leukemia inhibitory factor promote extramedullary hematopoiesis  (DOI: https://doi.org/10.1371/journal.pbio.3001746). This dataset includes 31 folders organized by Figure number and description of data type (flow cytometry, RT qPCR, ELISA, Immunofluorescence) and each folder contains a data dictionary file to describe variables.
DOI: 10.17632/3vcy44jb4x
title: Study I. PhD project

description: Data derived from the PhD project.
DOI: 10.17632/3z2tr4zjvf
title: Raw Data-Manuscript_The deubiquitinase OTUD1 negatively regulates inflammation and plays an immunoregulatory role in sepsis-induced lung injury

description: These additional files are uploaded as the "Raw Data of Original Materials", which we would like to share for review purpose only.

Document List for all the Raw data: 
Raw data 1: 
Demographics and Clinical characterization of patients;
Main clinical indexes and inflammatory biomarkers in sepsis patients.
Raw data 2: 
The Detailed Transcriptomics profile of clinical sepsis patients;
Public array-based profiling of sepsis patients from the GEO database of NCBI: GSE57065; GSE28750; GSE76293.
Raw data 3：
The Detailed Proteomics profile and primary bioinformatics analysis of OTUD1 KO mice.
Raw data 4：
The Detailed Transcriptomics profile and primary bioinformatics analysis of CLP-induced experimental sepsis in OTUD1 KO mice.
Raw data 5：
The original images for HE staining and Transmission electron microscopy；lung injury scores; lung W/D ratio；MPO, SOD and LDH activities；PaO2+PaO2/FiO2 ratio；survival rates.
Raw data 6：
The levels of inflammatory cytokines in the serum of mice (ELISA)：TNF-α, IL-6, IL-1β and HMGB1 levels.
Raw data 7:
The levels of inflammatory cytokines of LPS-stimulated BMDMs (qRT-PCR-1)：TNF‐α, IL-6, IL‐1β and HMGB1 expression levels;
The levels of inflammatory cytokines of LPS-stimulated BMDMs by pretreatment with 5Z-7-ox (qRT-PCR-2)：TNF‐α, IL-6, IL‐1β and HMGB1 expression levels.
Raw data 8
The activation of TAK1-MAPK/NF-κB pathways in LPS-stimulated BMDMs (Western Blot-1)：Expression levels of TAK1, p38, JNK, ERK, p65 as well as their respective phosphorylated proteins;
The activation of TAK1-MAPK/NF-κB pathways in LPS-stimulated BMDMs by pretreatment with 5Z-7-ox (Western Blot-2)：Expression levels of TAK1, p38, JNK, ERK, p65 as well as their respective phosphorylated proteins;
The activation of TAK1-MAPK/NF-κB pathways in lung tissues of mice (Western Blot-3)：Expression levels of TAK1, p38, JNK, ERK, p65 as well as their respective phosphorylated proteins.
DOI: 10.17632/5czjjttm9h
title: Supplementary Dataset S1

description: Processed R-seq data received from ERCB.
DOI: 10.17632/9jvntytzdz
title: Características extraídas con la Metodología de Aproximación al Método de Wrappers Exhaustivos a partir de la base de datos BCI Competition IV-2b y de señales capturadas con el headset Emotiv EPOC.

description: Esta base de datos contiene una lista de caracteristicas temporales y frecuenciales extraidas a partir de señales EEG provenientes de la base de datos BCI Competition IV-2b y de un banco de señales EEG capturadas mediante el Emotiv EPOC. Dichas señales estan asociadas a tareas de imaginación motora. Esta base de datos corresponde a los resultados de la etapa de extraccion de caracteristicas del trabajo de grado titulado “INTERFAZ CEREBRO-COMPUTADOR PARA LA DECODIFICACIÓN DE LA INTENCIÓN DE MOVIMIENTO DE LA MANO A TRAVÉS DE UN ENTORNO VIRTUAL” desarrollado en la Universidad del Valle CO, en la Escuela de Ingeniería Eléctrica y Electrónica.
DOI: 10.17632/c9pwxsg2z7
title: HASEonGPU—An adaptive, load-balanced MPI/GPU-code for calculating the amplified spontaneous emission in high power laser media

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We present an adaptive Monte Carlo algorithm for computing the amplified spontaneous emission (ASE) flux in laser gain media pumped by pulsed lasers. With the design of high power lasers in mind, which require large size gain media, we have developed the open source code HASEonGPU that is capable of utilizing multiple graphic processing units (GPUs). With HASEonGPU, time to solution is reduced to minutes on a medium size GPU cluster of 64 NVIDIA Tesla K20m GPUs and excellent speedup is achiev... Title of program: HASEonGPU Catalogue Id: AFAM_v1_0 Nature of problem The algorithm described by D. Albach in [1,2] uses ray-tracing techniques and Monte Carlo integration to calculate Amplified Spontaneous Emission (ASE) with high precision. It requires a high number of sampling points as well as a high number of rays to reach the desired results. Additionally, reflections on the upper and lower surface of the medium increase the workload by an order of magnitude. On traditional CPU-based systems the computation is time-consuming, which limits the number of simul ... Versions of this program held in the CPC repository in Mendeley Data AFAM_v1_0; HASEonGPU; 10.1016/j.cpc.2016.05.019
DOI: 10.17632/cwp6k2wj99
title: The prevalence of nomophobia among northern Indian college students and the contributing factors.

description: The College Student Nomophobia Prevalence. Mobile phones are now considered to be essential instruments for social interaction, communication, and information access. But despite its advantages, an over-reliance on mobile gadgets has led to a syndrome called nomophobia. Nomophobia, which is short for "no-mobile-phone-phobia," is the term used to describe the worry or anxiety people feel when they can't use their phones or when they're alone without them. The possible effects of this illness on social behavior, productivity, and mental health have drawn more and more attention. Even though nomophobia is common and still relevant in today's world, there is still a dearth of empirical research on the subject. A total of 420 north Indian college students who were enrolled in the survey participated online. The NMP-Q and demographic information were included in the questionnaire, which was created using Google Forms. For data gathering, it was sent via social networking sites, WhatsApp, and email. The gathered data were then subjected to statistical analysis utilizing SPSS software. A study on the prevalence of nomophobia among college students, which involved 420 participants, found that 79.05% of participants showed moderate levels of the phobia, 12.14% mild levels, 8.57% severe symptoms, and only 0.24% reported no signs at all. It implies that a common fear among the people polled is not having a cell phone or not being able to use one. The study shows how common nomophobia is among the people surveyed, with levels of fear ranging from mild to extreme smartphone dependency. The study emphasizes how critical it is to treat nomophobia as a serious problem that has an impact on mental health in the current digital era.
DOI: 10.17632/cwpb6kmxv7
title: Multiomic analysis of Cohesin reveals that ZBTB transcription factors contribute to chromatin interactions

description: One bottleneck in understanding the principles of 3D chromatin structures is caused by the paucity of known regulators. Cohesin is essential for 3D chromatin organization, and its interacting partners are candidate regulators. Here, we performed proteomic profiling of the Cohesin in chromatin and identified transcription factors, RNA-binding proteins, and chromatin regulators associated with Cohesin. Acute protein degradation followed by time-series genomic binding quantitation and BAT Hi-C analysis were conducted, and the results showed that the transcription factor ZBTB21 contributes to Cohesin chromatin binding, 3D chromatin interactions and transcriptional repression. Strikingly, multiomic analyses revealed that the other four ZBTB factors interacted with Cohesin, and double degradation of ZBTB21 and ZBTB7B led to a further decrease in Cohesin chromatin occupancy. We propose that multiple ZBTB transcription factors orchestrate the chromatin binding of Cohesin to regulate chromatin interactions, and we provide a catalog of many additional proteins associated with Cohesin that warrant further investigation.
DOI: 10.17632/frhhzcsbcy
title: suelos

description: suelos del norte del Huila
DOI: 10.17632/g4zxbxk32b
title: Lipid accumulation for biodiesel production by Tropidoneis maxima

description: This data were treated for low temperature and high light intensity of Tropidoneis maxima growth, total lipid accumulation, starch content, chlorophyll, and changes in cell structure
DOI: 10.17632/h6fj4w9fht
title: Mineralogy and geochemistry of modern Red River sediments: provenance and weathering implications-data

description: This data store is only for submission to Marine Geology.
DOI: 10.17632/pzhpzm9hrd
title: Graptemys datalogger

description: raw data files, python code, and r code
DOI: 10.17632/vk8cn5m4zv
title: Decreasing Hippocampal Apoptosis and Improvement of Spatial Memory After High-Intensity Interval Training in Male Adult Diabetic Rats 

description: to this aim, 48 eight-week-old male Wistar rats with 150 ± 10 g weight were categorized in 4 groups: control (n=12), diabetic (n = 12), exercise diabetic (n=12), exercise (n = 12). Peritoneal injection of STZ so-lution (50 mg / kg) was used to induce diabetes. After familiarization with the environment and training for a week, HIIT protocol was performed 3 times/week for 6-weeks, with 50-110% vo2max intensity. MWM protocols were applied to assess spatial memory and learning. Finally, BDNF, FOXO-1, CASPASE-3 gene expression was evaluated by using Real Time PCR technique.
. High intensity interval training
The HIIT started after the animals were acclimatized and familiarized with the exercise training with the intensity of 30-50% of VO2max (According to Høydala, 2007 article) within a three-day period. The repetitions during the three sessions were ranged from 6 to 8 repetitions in one minute with 2-min rest between the sets. As shown in figure, the main HIIT protocol was progressive during six weeks (3 sessions a week) (50-110% VO2max) (53). The HIIT started with a 5-min warm-up (45- 50% VO2max). The rats performed 10 repetitions of a 1-min run. However, the speed and degree of incline varied from week to another week, and 2- min inactive rest time be-tween the sets.
 Time-to-exhaustion 
The time-to-exhaustion test was performed on two groups (HIIT & DIIT) to com-pare pre- and post-training results. The rats run on the treadmill as the speed gradual-ly increased to evaluate time, distance and speed with respect to their performance. To start, the treadmill was set at the speed of 10m/min with a fixed incline of zero and the speed increased by 2m/min for every 2 min until the rats were exhausted or the maxi-mum speed was achieved. The result of the post-test indicated that the rats improved their performance.
Morris water maze is a circular pool (150 cm diameter, 60 cm height) which was divided into four quadrants and was filled with water (20±1 °C, 55±5% humidity), es-cape platform, and camera which was suspended above the maze and recorded escape latency, distance to reach the platform, and the percentage of time which rat spent in target. Then, the surface of escape platform was covered in a fixed position of 1 cm under the water. The MWM was in the laboratory surrounded by various signs. Each rat was given 8trials per day for 3 consecutive days. Each release point was randomly changed for every trial. To be accustomed to the maze, the mice were placed in water without platform for three minutes to swim three hours before training. Each trial lasted until the rat discovered the hidden platform or for a maximum duration of 60 seconds and then it was to rest on it for 30 seconds. if rat which failed to find the plat-form, it was placed on the platform by the experimenter. To assess memory retention, a spatial probe test was performed in 4th day, and the platform was removed from the maze. Each rat spent 60 seconds searching for the water maze.
DOI: 10.17632/3k4bdm6w7m
title: Adapting Organizational Culture Scale into Healthcare Professional Education: A Scale Validity and Reliability Analysis

description: Dataset and SPSS outputs for the study titled: Adapting Organizational Culture Scale into Healthcare Professional Education: A Scale Validity and Reliability Analysis
DOI: 10.17632/6j38nnzsdm
title: Sector-Specific Valuation Discounts in the Energy Industry: A Comparative Analysis of ESG Impacts Across Clean and Traditional Energy Firms

description: Firm Research Data (US)
DOI: 10.17632/c8tf7ggxsn
title: The dust aerosol measurement data during a dust event in Beijing 2021

description: This is the data used in the paper of “Shen, X. J., Sun, J. Y., Zhang, S. N., Zhang, Y. M., et al. Modification of submicron particles hygroscopicity and cloud condensation nuclei activation capacity by dust particles: A severe dust storm case in Beijing. Geophysical Research Letters”
DOI: 10.17632/cf578v8d8b
title: FabT_S.pyogenes_LipidAnalysis

description: A FabT mutation impacts the membrane fatty acid (FA) composition. Lipids are composed of FA. The effects of the FabT mutation on membrane FA composition should also alter phospholipid metabolism.
WT and mFabT strains were grown as 200 ml cultures in THY or THY-Tween until OD600 = 0.4 - 0.5. Lipid extractions and identifications were performed as described 1-4. Lipid separation was realized by normal phase HPLC (U3000 ThermoFisher Scientific) using a Inertsil Si 5μm column (150 x 2.1 mm I.D.) from GL Sciences Inc (Tokyo, Japan). Lipids were quantified using a Corona-CAD Ultra and identified by mass-spectrometry negative ionization and MS2/MS3 fragmentations (LTQ-Orbitrap Velos Pro). The adducts observed for molecular ions were: CH3COO- for MGDG, CH3COO- and H- for DGDG, H- for PG and CL. 
All raw data from MS/MS fragmentations can now be accessed in MZML open source format.
This analysis was repeated on 3 independent experiments. 

1-Kenanian, G. et al. Permissive Fatty Acid Incorporation Promotes Staphylococcal Adaptation to FASII Antibiotics in Host Environments. Cell Rep 29, 3974-3982 e3974, doi:10.1016/j.celrep.2019.11.071 (2019).
2-Abreu, S., Solgadi, A. & Chaminade, P. Optimization of normal phase chromatographic conditions for lipid analysis and comparison of associated detection techniques. J Chromatogr A 1514, 54-71, doi:10.1016/j.chroma.2017.07.063 (2017).
3-Bligh, E. G. & Dyer, W. J. A rapid method of total lipid extraction and purification. Can J Biochem Physiol 37, 911-917, doi:10.1139/o59-099 (1959).
4-Thedieck, K. et al. The MprF protein is required for lysinylation of phospholipids in listerial membranes and confers resistance to cationic antimicrobial peptides (CAMPs) on Listeria monocytogenes. Mol Microbiol 62, 1325-1339, doi:10.1111/j.1365-2958.2006.05452.x (2006).
DOI: 10.17632/dkb4knw455
title: Faecal prevalence, distribution and risk factors associated with canine soil-transmitted helminths contaminating urban parks across Australia

description: Gastrointestinal parasites of dogs found in parks in Australia based on centrifugal faecal floatation and qPCRs. A total of 1581 faecal samples from 190 dog parks were analyzed.