cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/w2xy6vs3xp
title: Data for: An unusual case of herpes simplex virus pneumonia with cavitary and necrotic changes

description: Pulmonary infection by herpes simplex virus in immunocompetent host which showed unusual pattern
DOI: 10.6084/m9.figshare.25283140.v4
title: Supplementary Material for: Human endogenous retroviruses (HERVs) in breast cancer: altered expression pattern implicates divergent roles in carcinogenesis

description: Introduction
Breast cancer is the most common cancer and the leading cause of cancer death in women. Recent research indicates that human endogenous retroviruses (HERVs) may be linked to carcinogenesis, but the data remain controversial.
Methods
HERVs´ expression was evaluated to show the differences between breast cancer and control samples, and their associations with clinicopathological parameters. Gene expression of 12 HERVs, i.e. ERVE-4, ERVW-1, ERVFRD-1, ERVV-1, ERV3-1, ERVH48-1, ERVMER34-1, ERVK7, ERVK13-1, ERVK11-1, ERVK3-1 and HCP5 was analyzed by qPCR and/or TCGA datasets for breast cancer. 
Results
ERV3-1, ERVFRD-1, ERVH48-1 and ERVW-1 provided data to support their tumor suppressor roles in breast cancer. ERV3-1 evinced the best performing diagnostic data based on qPCR, i.e. AUC: 0.819 (p &lt;0.0001), sensitivity of 72.41%, and specificity of 89.66%. Lower levels of ERV3-1 were noted in advanced stage and higher grades, and significant negative association was found in relation to Ki-67 levels. Oncogenic roles may be inferred for ERVK13-1, ERVV-1, and ERVMER34-1. Data for ERVK-7, ERVE-4, ERVK11-1 and HCP5 remain inconclusive.
Conclusion
Differential HERVs expression may be applicable to evaluate novel biomarkers for breast cancer. However, more research is needed to reveal their real clinical impact, the biological roles and regulatory mechanisms in breast carcinogenesis.
DOI: 10.17632/gg35v74yfc
title: Compliance with COVID-19 Health Protocols for Coffee Shop Visitors in Makassar City

description: The COVID-19 pandemic is a non-natural disaster faced by the medical sector in various countries in the world. This study aims to analyze the influence of COVID-19 health protocol compliance on Coffee Shop visitors in Makassar City. This research with the design of the study cross-sectional. Visitors to Coffee Shop 160 to determine the influence of COVID-19 health protocol compliance assessed age, education, knowledge, attitudes, and information messages. The chi-square analysis showed that 118 respondents (73, 8%) had higher education and 42 respondents (26.3%) had low education. Another factor contributing to the compliance of COVID-19 health protocols of Coffee Shop visitors was the information message from the task force 142 respondents (88.8%) received information 18 respondents (11.2%) did not receive information. In addition, the higher the education of visitors, the 0.505 times more compliant with COVID-19 health protocols and more information about COVID-19 then, compliance with COVID-19 health protocols will increase by 0.494 times. Education is the most influential variable feeding on the compliance of covid 19 health protocols. It is recommended that the task force always provide information to the public to increase knowledge for the community to continue implementing COVID-19 health protocols to reduce the spread of COVID-19.
DOI: 10.6084/m9.figshare.20219348.v1
title: Figure 8. Relative importance (IncMSE; %) of the environmental factors in controlling PSTI and APSTI values in different soil layers.

description: Relative importance of the environmental factors in controlling PSTI and APSTI values in different soil layers
DOI: 10.17632/2xyyhzts9x
title: Eye lens dose in CT examinations

description: In 2007-2010, approximately 660 million X-ray examinations were performed in Europe. Of these studies, 8,7 % were CT scans. However, they accounted for 52 % of diagnostic and interventional healthcare radiation. The lens of the eye is particularly sensitive to ionizing radiation and excessive radiation can cause cataracts. Cataracts are the leading cause of blindness and visual disability worldwide. Radiation-induced cataracts are currently classified as deterministic with threshold-dose of 0.5 Sv, but there is evidence that the cataract risk is also increases by radiation doses lower than that. . The purpose of our study was to investigate how well the ALARA principle was followed in the Tampere University Hospital regarding the radiation protection of the lens in the brain CT scans by the use of optimal gantry tilt and scan length. The study was designed as two-part investigation where first the current state of patient exposure levels was assessed. Thereafter identified issues were addressed and a follow-up assessment was made to verify the improvements.

The dataset included 329 pre-training and 51 post-training adult brain CT scans. The collected data from patients included: age, sex, CTDIvol, DLP, and gantry tilt angle. The eye lens absorbed doses in Class A and Class C were modeled by using CT-Expo v. 2.7.   

Three different categories were used to classify if the gantry tilt and scan length were optimal. In Class A the scan area is fitted to supraorbitomeatal line. In Class C the scan area is fitted to infraortibomeatal line or below. The Class B is between Class A and C where the scan area is fitted around orbitomeatal line. The lowest image in the CT image stack was used to classify the study. 

Non-zero gantry tilt had been used in a large proportion of the CT-examinations in the retrospective setting, 84.8%. However, the lenses were successfully excluded from the scan area in only 1.8 % of the examinations. In the prospective part, the gantry tilt was used in 98% of the studies and the proportion of successful examinations rose from 1.8% to 11.8%. The lens dose decreased significantly when the eyes were excluded from the imaging area. The modelled lens dose was 25.9 mGy (17.8 - 49.2 mGy) when the eyes were included and 1.7 mGy (0.4 - 2.4 mGy) when the eyes were excluded. 

The data in the file includes: patient age and sex, gantry tilt in degrees, classification (A-C), CTDIvol, DLP, lens dose (mGy) and notes about possible implants.
DOI: 10.6084/m9.figshare.3522569.v1
title: Appendix A. A summary of logistic ANCOVAs evaluating the effects of seed mass and habitat on the probability of seedling survival one year after emergence in seven species of Psychotria in field conditions at Los Tuxtlas tropical rain forest, Mexico.

description: A summary of logistic ANCOVAs evaluating the effects of seed mass and habitat on the probability of seedling survival one year after emergence in seven species of Psychotria in field conditions at Los Tuxtlas tropical rain forest, Mexico.
DOI: 10.17632/265c2tb8cp
title: soft skills

description: soft skills
DOI: 10.6084/m9.figshare.25688853.v1
title: NC-Manuscript related

description: raw data
DOI: 10.17632/gmtrn3x6yw
title: hnRNPUL1-AS

description: In previous studies, we verified that nonylphenols (NPs) facilitate the occurrence of allergic rhinitis (AR). By analyzing data from the Gene Expression Omnibus database and subsequent verification with clinical samples, we confirmed that the A3SS alternative splicing of TRAF2 and NCK interacting kinase (TNIK) plays a significant role in AR. Meanwhile, we discovered that NP could suppress the expression of hnRNPUL1 and increase the alternative splicing ratio of TNIK in the nasal mucosa of mice. Further studies revealed that downregulation of the splicing factor hnRNPUL1 promoted A3SS alternative splicing in TNIK, leading to the deposition of β-catenin in nasal mucosa tissue and enhanced binding of β-catenin with TCF1 and TCF4. This binding, in turn, increased the expression of GATA3 and decreased that of Th1 cell transcription factor T-bet and Treg cell transcription factor Foxp3, driving the immune response towards Th2 polarization. A mere increase in β-catenin expression sufficiently promoted the proliferation of all helper T cell subsets; however, it did not induce any changes in Th cell differentiation. Under NP intervention, the expression of hnRNPUL1 was more reduced, Th2 polarization in local tissues was more pronounced, and symptoms in mice were more severe than under non-NP intervention. These findings confirm that NP intake can interfere with the transcription process and exacerbate the development of AR.
DOI: 10.6084/m9.figshare.3526433.v1
title: Appendix B. Ceanothus occurrence matrix.

description: Ceanothus occurrence matrix.
DOI: 10.17632/c8ypkyswv3
title: Graduation

description: This dataset focuses on 253 graduates from the class of 2020 majoring in Computer Science and Technology at Hebei Agricultural University. The data primarily comes from the graduates' academic performance and self-assessment questionnaires, specifically including scores from foundational professional courses, core professional courses, and general education courses to quantify their academic performance. Additionally, the Richter Scale (Likert scale) was used to collect and analyze qualitative data on students' innovation ability, autonomous learning ability, employability, personal qualities, and moral character. 

According to the talent cultivation program, graduation requirements are divided into three primary indicators: Professional Knowledge and Skills, Professional Competence and Development, and Personal Qualities and Morality. Each primary indicator includes several secondary indicators. For example, "Professional Knowledge and Skills" covers engineering knowledge, research ability, and information technology; "Professional Competence and Development" includes innovation and entrepreneurship, lifelong learning, and professional norms; while "Personal Qualities and Morality" involves all-round development and moral character. Each secondary indicator is further subdivided into two or three tertiary indicators, and each evaluation criterion corresponds to supporting courses or evaluation scales.

To ensure the objectivity and reasonableness of the assessment results, the study first standardized the academic scores and Likert scale scores for each student. Then, based on the weights calculated using the Analytic Hierarchy Process (AHP), a comprehensive score for each student was calculated for each evaluation criterion. Subsequently, the TOPSIS model was applied to determine the positive ideal solution and negative ideal solution for each indicator. Combined with the weights obtained from AHP, the Euclidean distances between each student and the positive and negative ideal solutions were computed to derive the relative closeness of each student to the graduation requirements. This process ensured the objectivity and reasonableness of the evaluation results while considering the combined effect of all evaluation criteria. Finally, the achievements of these 253 graduates were assessed by integrating these two models.
DOI: 10.6084/m9.figshare.28748270.v1
title: Supplementary-file.docx

description: Our study investigated the impact of Sodium-glucose cotransporter 2 (SGLT2) inhibitors on the incidence, complications, and therapeutic demands of anemia in patients with diabetes utilizing real-world data, compared to treatment with dipeptidyl peptidase 4 (DPP4) inhibitors.
DOI: 10.6084/m9.figshare.11467071.v1
title: Qilian Mountains——Data

description: This is the data about the manuscript of our research in Qilian Mountains
DOI: 10.17632/8wxwnywpsk
title: Data for: A socio-economic exploration of landholder motivations to participate in afforestation programs in the Republic of Ireland: The role of irreversibility, inheritance and bequest value.

description: Response data from postal survey of Irish farmers regarding a) their decision to participate in forestry programs and b) the extent of their planting if they have participated.
DOI: 10.17632/g4n4xvs2yk
title: The list of cyanobacteria and algae in biological soil crusts of mountain plant communities at the Northern Urals (Russia European Northeast)

description: The list of cyanobacteria and algae in biological soil crusts of mountain plant communities at the Northern Urals (Russia European Northeast)
I.V. Novakovskaya, E.N. Patova, Y.A. Dubrovskiy, A.B. Novakovskiy, E.E. Kulyugina
Institute of Biology, Komi SC UrO RAS 

This paper describes the taxonomical diversity of soil algae of biological soil crusts on bare substrates in different mountain vegetation types at the Northern Urals. Cyanobacteria and algae were collected on ecological profile (with a change in height above sea level) from 3 mountain vegetation communities and 18 plant associations in July, 2018-2019. Algae of mountain meadow (1 – Calamagrostidosum, 63°40'11" N; 59°07'01" E), mountain forests (2 - Montano-Laricetum avenellosum, 63°40'12" N; 59°06'59" E, 3 - Abietetum geraniosum, 63°40'19" N; 59°07'04" E, 4 - Betuletum geraniosum, 63°40'29" N; 59°07'08" E, 5 - Betuletum geraniosum, 63°40'37" N; 59°07'02" E, 6 - Montano-Laricetum bistortosum, 63°52'04" N; 59°01'30" E, 7 - Montano-Betuletum myrtilloso-hylocomiosum, 63°51'38" N; 9°00'33" E) and mountain tundra (8 - Fruticuletum cladinosum, 63°40'47" N; 59°06'52" E, 9 - Fruticuletum cladinosum, 63°40'54" N; 59°06'49" E, 10 - Fruticuletum cladinosum, 63°41'63" N; 59°06'50" E, 11 - Fruticuleto–Betuletum nanae flavocetrariosum, 63°51'42" N; 59°00'17" E, 12 - Fruticuleto–Betuletum nanae flavocetrariosum, 63°53'38" N; 59°07'42" E, 13 - Bistorto majoris–Avenelletum polytrichosum, 63°52'37" N; 59°04'37" E, 14 - Bistorto majoris–Avenelletum hylocomiosum, 63°52'30" N; 59°01'31" E, 15 - Fruticuleto–Betuletum nanae flavocetrariosum, 63°52'25" N; 59°01'19" E, 16 - Carycetum cladinosum, 63°54'05" N; 59°06'06" E, 17 - Carycetum hylocomiosum, 63°54'03" N; 59°06'11" E, 18 - Carycetum polytrichosum, 63°54'02" N; 59°06'44" E) were investigated. Algae and cyanobacteria species were identified using guides [Komárek and Anagnostidis, 2005; Komárek 2013; Ettl and Gärtner 2014]. 
At the studied ecological profile, we found 99 species of algae from Cyanobacteria – 27, Euglenozoa – 1, Ochrophyta – 5, Bacillariophyta – 4, Chlorophyta – 55, Charophyta – 7. 
The detailed of site descriptions and analysis of the list of cyanobacteria and algae taxa are given in [Novakovskaya et al., 2022].
The study was performed in part as Federal Tasks № АААА-А19-119011790022-1.
References
Ettl H, Gärtner G (2014) Syllabus der Boden-, Luft-und Flechtenalgen, A. 2. Springer, Berlin, Heidelberg
Komárek J (2013) Süßwasserflora von Mitteleuropa. Cyanoprokaryota III: Nostocales, Stigonematales, Bd. 19/3. Springer, Berlin
Komárek J, Anagnostidis K (2005) Süβwasserflora von Mitteleuropa. Cyanoprokaryota II: Oscillatoriales, Bd. 19/2. Springer, München 
Novakovskaya I.V., Patova E.N., Dubrovskiy Y.A., Novakovskiy A.B., Kulyugina E.E. (2022) Distribution algae and cyanobacteria of biological soil crusts along the elevation gradient in mountain plant communities at the Northern Urals (Russian European Northeast). J. Mountain Science (in press)
DOI: 10.17632/3cmcxjrxhm
title: COOL1

description: The original western data for COOL1 paper.
DOI: 10.6084/m9.figshare.28701680.v1
title: Source Data (APPENDIX).xlsx

description: <b>Normalization Model of the Output Characteristic for Series and Parallel Silicon-Based Photovoltaic Cells</b>
DOI: 10.17632/58w9nkct44
title: PREVALENCE AND CORRELATES OF COVID-19 VACCINE HESITANCY AMONG HEALTH SCIENCE STUDENTS AT UNIVERSITY OF GONDAR, GONDAR, ETHIOPIA: A CROSS-SECTIONAL STUDY

description: A semi-structured self-administered questionnaire was used to collect the data. The questionnaires were adapted after a detailed analysis of relevant literature regarding COVID-19 vaccine hesitancy with some modifications (15-17). Questionnaires were prepared in English, because it is the medium of instruction in Ethiopian higher educational institutions. The questionnaire was designed to collect data regarding student socio-demographic variables (age, sex, department, year, father), source of information about COVID-19 vaccine, attitude towards COVID-19 vaccine, COVID-19 vaccine hesitancy, reasons of vaccine acceptance and vaccine hesitancy.
Data collection procedure, quality control
To ensure data quality, the overall data collection was strictly monitored by the principal investigators. The collected data were checked for completeness, accuracy, and consistency by the investigators throughout the data collection period. Training was given to data collectors on the methods of data collection.  Data collectors were informed to follow the WHO COVID-19 prevention protocols including wearing a facemask, using hand sanitizer, and keeping physical distancing during data collection. Pre-test was undertaken on 21(5%) health science students. Self-administered questionnaires were used to collect data.
Data analysis  
All the questionnaires were manually checked for completeness, then entered into Epi-Data version 4.2.0 and exported to SPSS version 23 for analysis. Descriptive data analysis results were displayed in the form of graphs, tables, and figures. Text using frequencies and summary statistics such as mean, standard deviation, and percentage were used. Bivariate logistic regression analysis was used to determine the association of each independent variable with the dependent variable. The direction and strength of statistical association are measured by odds ratio with 95% CI. The odds ratio along with 95%CI is estimated to identify predictors for COVID-19 vaccine hesitancy by using multivariable analysis in the binary logistic regression model. In this study, P-value <0.05 was considered a significant association.
DOI: 10.17632/kpftptxdj5
title: Air-traffic events recorded by a dense seismic array near Anza California

description: This dataset includes the beginning and end times of 1816 manually-detected air-traffic events using seismic records of the 2014 Sage Brush Flats Nodal Experiment (https://doi.org/10.7914/SN/ZG_2014). Raw waveforms are available from the IRIS Data Management Center (http://service.iris.edu/fdsnws/dataselect/1/). 

The dataset is created based on the methodology and analyses in the following publication: Meng, H. and Y. Ben-Zion. "Characteristics of airplanes and helicopters recorded by a dense seismic array near Anza California.", Journal of Geophysical Research: Solid Earth 123.6 (2018): 4783-4797 (https://doi.org/10.1029/2017JB015240). Related Matlab code and example data are available to model the Doppler effect of the air-traffic event through https://github.com/seismo-netizen/Air_Traffic.git. All beginning and end times of the detected air-traffic events are manually picked on spectrograms of the raw waveforms. 

The columns information:
| Year | Day of Year | Start time | End time | Quality | Type | Duration |
Year: 2014
Day of year: Julian day (129 to 157)
Start time: Beginning time of an event in seconds of that day (0 to 86400).
End time: End time of an event in seconds of that day (0 to 86400).
Quality:
	A: high quality, visible for almost all stations
	B: lower quality, only visible for a subset of stations
Type:
	A: an air traffic event (including airplane and helicopter)
	H: a possible helicopter event
	N: not determined

We note that it is difficult to determine whether a detected event is only associated with an airplane or a helicopter, or superposed on other signals. Event types are estimated.
DOI: 10.17632/h5rccz3nw6
title: Reliability Assessment and Improvement of Distribution System with Virtual Energy Storage under Exogenous and Endogenous Uncertainty

description: This dataset contains both the raw data of TCL-GES, RES and load, and the processed data for GES parameters.
The raw data came from the Pecan street with energy usage and temperature data of 100 TCL-GES units, real-world data of RES and load in low-voltage distribution system in China.
The processed data is obtained by data-driven method by this paper:  Smart Meter Data-Driven Evaluation of Operational Demand Response Potential of Residential Air Conditioning Loads
And both of the data are used for paper: Reliability Assessment and Improvement of Distribution System with Virtual Energy Storage under Exogenous and Endogenous Uncertainty
DOI: 10.15468/dl.rjdwft
title: Occurrence Download

description: A dataset containing 176364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-200000.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Crocodylia",
 "Year 1950-2025"
 ]
}

 The dataset includes 176364 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009217-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/tzdrr7bsff
title: Data for: Expression of Early Cretaceous Global anoxic events in northeastern Brazilian basins

description: Data used in the manuscript.
DOI: 10.6084/m9.figshare.28307192
title: GPMAG

description: To investigate genomic and functional insights of grapevine phyllosphere microbiome, GPMAGs were generated with 103 HiFi datasets acquired from 103 grapevine leaf accessions.
DOI: 10.17632/ywkh3z36m7
title: LINF_160014900

description: Snf7-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.22110872.v1
title: LLAMAS validation data

description: This is data collected for real-time validation of EEG-LLAMAS. It consists of recordings conducted with LLAMAS inside the MR scanner, and with brainvision Recorder outside the scanner.Please see the readme for more details.
DOI: 10.17632/6zbcbf94p5
title: A Dual STING-activating Nanosystem Expands Cancer Immunotherapeutic Temporal Window

description: Raw data
DOI: 10.17632/xty6zv4drw
title: Neural network models for centrifugal pumps

description: This repository contains the neural network models for prediction of tip clearance effects on the performance of radial turbopumps.