cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18383517
title: FINANCIAL RESULTS ANALYSIS IN COMMERCIAL BANKS UNIVERSITY OF ECONOMICS AND PEDAGOGY

description: The article describes the process of analyzing financial results in commercial banks and the specific features of the methods applied in the analysis.
DOI: 10.5061/dryad.r08t9
title: Data from: Biological and statistical processes jointly drive population aggregation: using host–parasite interactions to understand Taylor's power law

description: The macroecological pattern known as Taylor's power law (TPL)
 represents the pervasive tendency of the variance in population density to
 increase as a power function of the mean. Despite empirical illustrations
 in systems ranging from viruses to vertebrates, the biological
 significance of this relationship continues to be debated. Here we
 combined collection of a unique dataset involving 11 987 amphibian hosts
 and 332 684 trematode parasites with experimental measurements of core
 epidemiological outcomes to explicitly test the contributions of
 hypothesized biological processes in driving aggregation. After using
 feasible set theory to account for mechanisms acting indirectly on
 aggregation and statistical constraints inherent to the data, we detected
 strongly consistent influences of host and parasite species identity over
 7 years of sampling. Incorporation of field-based measurements of host
 body size, its variance and spatial heterogeneity in host density
 accounted for host identity effects, while experimental quantification of
 infection competence (and especially virulence from the 20 most common
 host–parasite combinations) revealed the role of species-by-environment
 interactions. By uniting constraint-based theory, controlled experiments
 and community-based field surveys, we illustrate the joint influences of
 biological and statistical processes on parasite aggregation and emphasize
 their importance for understanding population regulation and ecological
 stability across a range of systems, both infectious and free-living.
description: Feasible set analysis
 for host-parasite Taylor's Power Lawprsb_datafiles.zip
DOI: 10.15468/dl.n3fc5t
title: Occurrence Download

description: A dataset containing 1426 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sphenoclea zeylanica",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1426 records from 164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001034-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.11t6b14t
title: Data from: Mechanisms and fitness effects of antibacterial defenses in a carrion beetle

description: Parents of many species care for their offspring by protecting them from a
 wide range of environmental hazards, including desiccation, food
 shortages, predators, competitors, and parasites and pathogens. Currently,
 little is known about the mechanisms and fitness consequences of parental
 defenses against bacterial pathogens and competitors. Here we combine
 approaches from microbiology and behavioural ecology to investigate the
 role and mechanistic basis of antibacterial secretions applied to
 carcasses by parents of the burying beetle Nicrophorus vespilloides. This
 species rears its larvae on vertebrate carcasses, where larvae suffer
 significant fitness costs due to competition with bacterial decomposers.
 We first confirm that anal secretions produced by parents are potently
 bactericidal, and that their effects are specific to gram-positive
 bacteria. Next, we identify the source of bacterial killing as a secreted
 lysozyme, and show that its concentration changes throughout the breeding
 cycle. Finally, we show that secreted lysozyme is crucial for larval
 development, increasing survival by nearly two-fold compared to offspring
 reared in its absence. These results demonstrate for the first time that
 anal secretions applied to carrion is a form of parental care, and expand
 the mechanistic repertoire of defenses used by parent insects to protect
 dependent offspring from microbial threats.
description: Arce et al
 data
DOI: 10.5061/dryad.h0d12
title: Data from: The double-edged sword of immune defence and damage control: do food availability and immune challenge alter the balance?

description: 1.Animal immune systems must adaptively balance aggressive immune
 resistance (ability to destroy pathogens) with infection tolerance
 (ability to withstand the negative effects of infection; e.g.,
 immunopathology or damage due to pathogen metabolism). 2.Insects offer
 unique insight into this balancing act because phenoloxidase (PO)-mediated
 melanisation is a key feature of immune resistance, but PO activation
 obligates the production of non-specific reactive species that can cause
 self-damage. The antioxidant glutathione (GSH) can provide protection
 against such reactive molecules, but high levels of GSH can impair
 melanisation. In support of the hypothesis that GSH can protect insects
 (e.g., crickets) from self-damage during an immune response, we found that
 bacterially infected crickets showed a significant positive relationship
 between GSH haemolymph concentration and fecundity after controlling for
 bacterial growth rate. That is, GSH may be a mechanism of infection
 tolerance because it correlated with fecundity despite bacterial
 proliferation. 3.Next, we factorially manipulated food availability and
 immune activation in female crickets to examine whether the relative
 balance between a component of immune resistance (i.e., PO) and protection
 from self-damage (i.e., GSH) was plastic and sensitive to environmental
 conditions. 4.Glutathione and PO were positively correlated, and the
 PO:GSH ratio was robust and not affected by food availability or immune
 activation. Thus, increased investment in a mechanism of immune resistance
 may obligate a concomitant increase in GSH to reduce self-damage (i.e.,
 increase infection tolerance). Chronic immune activation led to greater
 tolerance of oxidative stress suggesting that repeated immune activation
 up-regulates infection tolerance mechanisms. Food limitation led to
 reduced PO activity, but not GSH concentration. This result suggests that
 mechanisms of immune resistance may be more sensitive to resource scarcity
 than mechanisms of infection tolerance. 5.We demonstrate that some
 mechanisms of immune resistance and infection tolerance can be correlated,
 and that they can be affected by food availability or immune activation.
description: Raw hemolymph,
 egg-laying, and paraquat survival dataData from: Egg-laying
 and paraquat survival data, and hemolymph data for phenoloxidase activity,
 protein content, and glutathione concentrationPO, GSH, PQ
 data.xlsx
DOI: 10.15468/dl.ek7fm3
title: Occurrence Download

description: A dataset containing 1231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Manis pentadactyla"
 ]
}

 The dataset includes 1231 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001035-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.r42qf
title: Data from: Phylogeny of salmonids (salmoniformes: Salmonidae) and its molecular dating: analysis of mtDNA data

description: Phylogenetic relationships among 41 species of salmonid fish and some
 aspects of their diversification-time history were studied using the
 GenBank and original mtDNA data. The position of the root of the
 Salmonidae phylogenetic tree was uncertain. Among the possible variants,
 the most reasonable seems to be that in which thymallins are grouped into
 the same clade as coregonins and the lineage of salmonins occupied a basal
 position relative to this clade. The genera of Salmoninae formed two
 distinct clades, i.e., (Brachymystax, Hucho) and (Salmo, Parahucho,
 (Salvelinus, (Parasalmo, Oncorhynchus)). Furthermore, the genera Parasalmo
 and Oncorhynchus were reciprocally monophyletic. The congruence of
 Salmonidae phylogenetic trees obtained using different types of
 phylogenetic markers is discussed. According to Bayesian dating, ancestral
 lineages of salmonids and their sister esocoids diverged about 106 million
 years ago. Sometime after, probably 100–70 million years ago, the
 salmonid-specific whole genome duplication took place. The divergence of
 salmonid lineages on the genus level occurred much later, within the time
 interval of 42–20 million years ago. The main wave of the diversification
 of salmonids at the species level occurred during the last 12 million
 years. The possible effect of genome duplication on the Salmonidae
 diversification pattern is discussed.
description: salmonids.mtDNA.timetreeBayesian chronogram (NEXUS tree format) of salmonid cladogenesis
DOI: 10.5281/zenodo.18383511
title: Falange thematic networks (1939–1941): Data and code for the formalization of a hermeneutic analysis

description: This dataset accompanies the article on the formalization of a hermeneutic thematic analysis of Falange documents (1939–1941). It provides the data and procedures used to construct a bipartite Document–Theme network and a derived Theme–Theme projection, based on qualitative coding of historical sources.

The files included allow users to reproduce the network structures, calculate basic centrality metrics, and generate the figures presented in the article. The analysis prioritizes interpretive transparency and methodological control, preserving the primacy of historical hermeneutics over automated or exploratory network inference.
DOI: 10.5281/zenodo.18383510
title: Falange thematic networks (1939–1941): Data and code for the formalization of a hermeneutic analysis

description: This dataset accompanies the article on the formalization of a hermeneutic thematic analysis of Falange documents (1939–1941). It provides the data and procedures used to construct a bipartite Document–Theme network and a derived Theme–Theme projection, based on qualitative coding of historical sources.

The files included allow users to reproduce the network structures, calculate basic centrality metrics, and generate the figures presented in the article. The analysis prioritizes interpretive transparency and methodological control, preserving the primacy of historical hermeneutics over automated or exploratory network inference.
DOI: 10.5061/dryad.m3069
title: Data from: Alternative reproductive tactics and inverse size-assortment in a high-density fish spawning aggregation

description: Background: At high densities, terrestrial and marine species often employ
 alternate reproductive tactics (ARTs) to maximize reproductive benefits.
 We describe ARTs in a high-density and unfished spawning aggregation of
 the squaretail grouper (Plectropomus areolatus) in Lakshadweep, India.
 Results: As previously reported for this species, territorial males engage
 in pair-courtship, which is associated with a pair-spawning tactic. Here,
 we document a previously unreported school-courtship tactic; where
 territorial males court multiple females in mid-water schools, which
 appears to culminate in a unique ‘school-spawning’ tactic. Courtship
 tactics were conditional on body size, local mate density and habitat,
 likely associated with changing trade-offs between potential mating
 opportunities and intra-sexual competition. Counter-intuitively, the
 aggregation showed a habitat-specific inverse size-assortment: large males
 courted small females on the reef slope while small males courted
 equal-sized or larger females on the shelf. These patterns remained stable
 across two years of observation at high, unfished densities. Conclusions:
 These unique density-dependent behaviours may disappear from this
 aggregation as overall densities decline due to increasing commercial
 fishing pressure, with potentially large consequences for demographics and
 fitness.
description: male courtship
 ratesThis file contains data
 on the number of females courted by a male in one minute.Two types of
 males: small and large males were sampled in two kinds of habitats: reef
 slope and reef shelf.courtship.rates.csvmale and female size distributionFile contains point count data taken in slope and shelf habitats at the aggregation site on the distribution of males and females of two size classes : small and large.ptcounts.csvmale activityTime-Activity (aggression, spawning interaction, rove and rest) of large and small males in the slope and shelf habitat.male_activitybudget.csvannual aggregation densityAnnual density census of fish at the aggregation site in January and February 2013 and 2014 respectively.annual.density.csv
DOI: 10.5061/dryad.rv6b7
title: Data from: Natural variation in female reproductive hormones does not affect contrast sensitivity

description: Evidence suggests that females experience adaptive shifts in facial
 preferences across the menstrual cycle. However, recent discussions and
 meta-analyses suggest that these findings are equivocal. A previously
 unexplored question is the extent to which shifts in female preferences
 are modulated by hormone-dependent changes occurring in low-level vision,
 such as visual sensitivity. This mechanistic approach has been a novel
 method for investigating the extent to which complex perceptual phenomena
 are driven by low-level versus higher-level perceptual processes. We
 investigated whether the contrast sensitivity function—an early dimension
 of vision—is also influenced by variation in female reproductive hormones.
 Visual contrast thresholds were measured for 1, 4 and 16 cycles/degree
 gratings during the ovulatory, luteal and menstrual phases of the
 menstrual cycle in naturally cycling women, and women using oral
 contraceptives. Male participants were tested at similar time intervals.
 Results showed that visual contrast sensitivity does not differ according
 to sex, or use of oral contraception, nor does it vary relative to
 hormonal shifts across the menstrual cycle. These findings suggest that
 shifts in female preferences are not driven by changes in visual
 sensitivity, and are therefore likely attributable to changes in
 higher-level perception or cognition.
description: Contrast sensitivity
 across the menstrual cyclecontrast sensitivity
 from a control sample of male participants, and across the menstrual
 cycles of naturally cycling women and users of combined oral
 contraception.csfmcalldata.xlsx
DOI: 10.5061/dryad.g8t00
title: Data from: Trait syndromes among North American trees are evolutionarily conserved and show adaptive value over broad geographic scales

description: Adaptive syndromes and their evolutionary constraints represent a powerful
 construct for understanding plant distributions. However, it is unclear
 how the species requirements to face multiple stressors promotes syndrome
 formation and to which abiotic stressors these syndromes show adaptive
 value over broad geographic scales. We combined local occurrence data from
 the U.S. Forest Inventory and Analysis (FIA) of 219 angiosperm and 85
 gymnosperm species living across the conterminous US with phylogenies and
 trait data to identify tree syndromes, their evolutionary conservatism,
 and their adaptive value over broad scales. Factor analyses and
 evolutionary model selection revealed that trees possess functional trait
 syndromes that are strongly conserved. Major syndromes at the species
 level differed between angiosperms and gymnosperms. While the two main
 syndromes in angiosperms were related to cold and drought-waterlogging
 tolerance, in gymnosperms a trade-off between shade and drought tolerance
 was the main syndrome followed by a growth-fire resistance syndrome.
 Additional RLQ and fourth-corner approaches revealed that trait syndromes
 at the community level were broadly similar to those observed at the
 species level for angiosperms, although this was less clear for
 gymnosperms. This suggests that syndrome evolution has played an important
 role on angiosperm distributions, whereas additional ecological factors
 explain gymnosperm distributions. Importantly, syndromes show adaptive
 value, as they were geographically associated with several environmental
 variables showing structure from continental to local scales, being
 temperature the main abiotic stressor. Our results indicate that across
 the conterminous US tree species possess clear syndromes that are
 subjected to strong evolutionary constraints driving tree species and
 forest community distribution.
description: Rueda et al.
 2017_Ecography-Appendix 1_Trait valuesSpecies list and trait
 values for 85 gymnosperms and 219 woody angiosperms of North America.
 Imputed missing values for each trait are highlighted in
 bold.
DOI: 10.5061/dryad.s1n6p
title: Data from: Eggshells as hosts of bacterial communities: an experimental test of the antimicrobial egg coloration hypothesis

description: Oviparous animals have evolved multiple defenses to prevent microbes from
 penetrating their eggs and causing embryo mortality. In birds, egg
 constituents such as lysozyme and antibodies defend against microbial
 infestation, but eggshell pigments might also impact survival of bacteria.
 If so, microbes could exert an important selective pressure on the
 evolution of eggshell coloration. In a previous lab experiment, eggshell
 protoporphyrin caused drastic mortality in cultures of Gram positive, but
 not Gram negative, bacteria when exposed to light. Here, we test this
 ‘photodynamic antimicrobial hypothesis’ in a field experiment. In a paired
 experimental design we placed sanitized brown, protoporphyrin-rich chicken
 eggs alongside white eggs that lack protoporphyrin. We deployed eggs for
 48 hrs without incubation, as can occur between laying and incubation,
 when microbial infection risk is highest. Eggs were placed on the open
 ground exposed to sunlight and in dark underground storm-petrel burrows.
 We predicted that the proportion of Gram positive bacteria on brown eggs
 should be lower when exposed to sunlight than when kept in the dark, but
 we expected no such difference for white eggs. Although our data revealed
 variation in bacterial community composition, the proportion of Gram
 positive bacteria on eggshells did not vary by egg colour, and there was
 no interaction between egg colour and location. Instead, Gram positive
 bacteria were proportionally more common on eggs on the ground than eggs
 in burrows. Overall, our experiment did not support the photodynamic
 antimicrobial hypothesis. The diverse range of avian egg colours is
 generated by just two pigments, but over 10 hypotheses have been proposed
 for the evolution of eggshell colour. If our results are generalizable,
 eggshell protoporphyrin might not play a substantial role in defending
 eggs against microbes, which narrows the field of candidate hypotheses for
 the evolution of avian eggshell coloration.
description: Eggshell data, including
 pigment concentrations and bacteria community
 compositionDearborn_EE_data.csv
DOI: 10.5061/dryad.dj827
title: Data from: Individual boldness is linked with protective shell shape in aquatic snails

description: The existence of consistent individual differences in behaviour (‘animal
 personality’) has been well documented in recent years. However, how such
 individual variation in behaviour is maintained over evolutionary time is
 an ongoing conundrum. A well-studied axis of animal personality is
 individual variation along a bold–shy continuum, where individuals differ
 consistently in their propensity to take risks. A predation-risk cost to
 boldness is often assumed, but also that the reproductive benefits
 associated with boldness lead to equivalent fitness outcomes between bold
 and shy individuals over a lifetime. However, an alternative or
 complementary explanation may be that bold individuals phenotypically
 compensate for their risky lifestyle to reduce predation costs, for
 instance by investing in more pronounced morphological defences. Here, we
 investigate the ‘phenotypic compensation’ hypothesis, i.e. that bold
 individuals exhibit more pronounced anti-predator defences than shy
 individuals, by relating shell shape in the aquatic snail Radix balthica
 to an index of individual boldness. Our analyses find a strong
 relationship between risk-taking propensity and shell shape in this
 species, with bolder individuals exhibiting a more defended shell shape
 than shy individuals. We suggest that this supports the ‘phenotypic
 compensation’ hypothesis and sheds light on a previously poorly studied
 mechanism to promote the maintenance of personality variation among
 animals.
description: boldness is linked with
 protective shell shape in aquatic snailsIndividual boldness is
 linked with protective shell shape in aquatic snailsbiol
 upload?.xlsx
DOI: 10.5061/dryad.ch234
title: Data from: Evolutionary changes in pubic orientation in dinosaurs are more strongly correlated with the ventilation system than with herbivory

description: Among dinosaurs, the pubis has convergently retroverted four times in
 Maniraptora (Theropoda) and once in Ornithischia. Although a clear
 correlation has not been demonstrated, it has been previously proposed
 that two traits were related to pubic retroversion: the reduced importance
 of cuirassal ventilation, and a herbivorous diet. Here, we analyse the
 possible influence of these traits on pubis orientation. Cuirassal
 ventilation was plesiomorphically present as an accessory ventilation
 mechanism in Dinosauria and was powered by the M. ischiotruncus, which was
 probably connected to a propubic pelvis. Cuirassal ventilation was reduced
 in both Ornithischia and Maniraptora, some of which also evolved
 herbivory. According to our results, cuirassal ventilation is more
 strongly correlated with pubic orientation than herbivory. The
 retroversion of the pubis during the evolution of birds resulted in major
 changes in the musculature of the tail. These changes increased the
 efficiency of the pubocaudalis muscles, which enhanced the birds’
 capability for take‐off from the ground. The release of the evolutionary
 constraint on pubic orientation through changes in the ventilatory system
 can therefore be considered to be an important step in bird evolution.
description: Appendix
 S1Total taxa sampling.
 Grey cells point out the apomorphy for which that taxon was chosen.
 *presence of probably unfunctional gastralia; NEI: not enough information
 available.Ventilatory
 constraint_AppS1.docxAppendix
 S2Taxa concerning which
 information was searched, with references. (?): in different category
 following different measurement (Op or Me, see in the text); NEI: not
 enough information available; NA: not applicable or useless
 character.Ventilatory
 constraint_AppS2.docx