cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6248432
title: Influence of Mediterranean Foods on Gut Microbiota Functionality in Obese Children Compared to Lean Children (Supplemental information)

description: Complete dataset including the antioxidant capacity for all foods tested with 3 antioxidant method.
DOI: 10.25345/c5kp7ts6g
title: MassIVE Reanalysis RMSV000000354.5375 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ATF7IP [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5qf8jk94
title: MassIVE Reanalysis RMSV000000354.5374 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, FCHO1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5g15tc4w
title: MassIVE MSV000088902 - Autoinhibition of Trio guanine nucleotide exchange factor activity for Rac1 by its spectrin repeats is disrupted by neurodevelopmental disorder-related genetic variants.
title: Crosslinking MS of SR6-GEF1 construct of Human Trio. Data acquired using FAIMS ion mobility source with each sample acquired at 4 different CVs (-40, -50, -60, -70V).
DOI: 10.25345/c5b853k1m
title: MassIVE Reanalysis RMSV000000354.5377 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, MRPL34 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c56h4cr7v
title: MassIVE Reanalysis RMSV000000354.5379 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ODF3L2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c52r3nz27
title: MassIVE Reanalysis RMSV000000354.5380 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, AKR1B1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5z02z96g
title: MassIVE Reanalysis RMSV000000354.5381 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, UBXN11 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5t727h36
title: MassIVE Reanalysis RMSV000000354.5378 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, MST1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.6084/m9.figshare.19221909
title: dataset Barb.Rodr.

description: Dataset referring to the botanical names proposed for Orchidaceae by Barbosa Rodrigues.Source: IPNI; WCSP; Flora do Brasil 2020
DOI: 10.6084/m9.figshare.19221909.v2
title: dataset Barb.Rodr.

description: Dataset referring to the botanical names proposed for Orchidaceae by Barbosa Rodrigues.Source: IPNI; WCSP; Flora do Brasil 2020
DOI: 10.6084/m9.figshare.19221909.v1
title: dataset Barb.Rodr

description: Dataset referring to the botanical names proposed for Orchidaceae by Barbosa Rodrigues.Source: IPNI; WCSP; Flora do Brasil 2020
DOI: 10.25345/c5pk0732s
title: MassIVE Reanalysis RMSV000000354.5384 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TUBA1B [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5js9h89z
title: MassIVE Reanalysis RMSV000000354.5382 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, PRKAG2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5f18sg6m
title: MassIVE Reanalysis RMSV000000354.5385 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, PLXNA4 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c59882p2v
title: MassIVE Reanalysis RMSV000000354.5387 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GLT1D1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c55h7bv7m
title: MassIVE Reanalysis RMSV000000354.5383 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, RAB1A [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c51r6n22d
title: MassIVE Reanalysis RMSV000000354.5388 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, MRPL50 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5x05xd86
title: MassIVE Reanalysis RMSV000000354.5386 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ZFYVE1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.6073/pasta/79378333f8ec409c56732042d1d9b7cb
title: Dissolved inorganic carbon and alkalinity of discrete water column samples, collected aboard Palmer LTER annual cruises of the Western Antarctic Peninsula, 1993 - 2019.

description: Dissolved inorganic carbon (DIC or total CO2 – TCO2) and total alkalinity (TALK) are two of the four parameters defining the carbonate system in seawater. DIC is composed of dissolved CO2 gas, which dissociates into carbonate, 〖CO〗_3^(2-), and bicarbonate, 〖HCO〗_3^- in seawater. About 90% of the DIC is in the form of bicarbonate, ~10% is carbonate, and ~1% is CO2. The dissociation of CO2 dissolved in seawater into carbonate and bicarbonate gives seawater its great capacity to absorb CO2 from the atmosphere. Alkalinity (also known as “buffer capacity”) is a measure of the capacity of water to neutralize acids. Alkalinity is a complex product of the concentrations of (in decreasing order of importance) the DIC components, borate, hydroxide, phosphate, silicate and dissolved ammonium. Ocean biology regulates the alkalinity through the uptake and release of the DIC and the macronutrients N, P and Si. We measure surface DIC and ALK to understand the exchange of CO2 across the air-sea interface in our study area. With DIC and dissolved CO2, we can also derive estimates of ocean pH and thus monitor the extent and evolution of ocean acidification. Analytical methods and QC are presented under the Methods and Protocols tab.
DOI: 10.25345/c5sb3x069
title: MassIVE Reanalysis RMSV000000354.5390 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, FIBIN [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5517/ccdc.csd.cc27sv30
title: CCDC 2079452: Experimental Crystal Structure Determination

description: Related Article: Daniel Bartenbach, Radian Popescu, Dagmar Gerthsen, Claus Feldmann|2022|Inorg.Chem.|61|3072|doi:10.1021/acs.inorgchem.1c03238
DOI: 10.5517/ccdc.csd.cc27xtbb
title: CCDC 2083272: Experimental Crystal Structure Determination

description: Related Article: Qing Sun, Xiaoguang Bao|2022|Chem.Commun.|58|2216|doi:10.1039/D1CC06756G
DOI: 10.5517/ccdc.csd.cc286kmp
title: CCDC 2091682: Experimental Crystal Structure Determination

description: Related Article: Alexander Schmer, Antonio García Alcaraz, Andreas Wolfgang Kyri, Gregor Schnakenburg, Arturo Espinosa Ferao, Rainer Streubel|2022|Dalton Trans.|51|3275|doi:10.1039/D1DT04252A
DOI: 10.5517/ccdc.csd.cc286knq
title: CCDC 2091683: Experimental Crystal Structure Determination

description: Related Article: Alexander Schmer, Antonio García Alcaraz, Andreas Wolfgang Kyri, Gregor Schnakenburg, Arturo Espinosa Ferao, Rainer Streubel|2022|Dalton Trans.|51|3275|doi:10.1039/D1DT04252A
DOI: 10.5517/ccdc.csd.cc28c987
title: CCDC 2096228: Experimental Crystal Structure Determination

description: Related Article: Vinod Bhajammanavar, Sumitava Mallik, Venkata Surya Kumar Choutipalli, Venkatesan Subramanian, Mahiuddin Baidya|2022|Chem.Commun.|58|2188|doi:10.1039/D1CC06544K
DOI: 10.5517/ccdc.csd.cc28c998
title: CCDC 2096229: Experimental Crystal Structure Determination

description: Related Article: Vinod Bhajammanavar, Sumitava Mallik, Venkata Surya Kumar Choutipalli, Venkatesan Subramanian, Mahiuddin Baidya|2022|Chem.Commun.|58|2188|doi:10.1039/D1CC06544K
DOI: 10.5517/ccdc.csd.cc28c9b9
title: CCDC 2096230: Experimental Crystal Structure Determination

description: Related Article: Vinod Bhajammanavar, Sumitava Mallik, Venkata Surya Kumar Choutipalli, Venkatesan Subramanian, Mahiuddin Baidya|2022|Chem.Commun.|58|2188|doi:10.1039/D1CC06544K
DOI: 10.5517/ccdc.csd.cc28c9cb
title: CCDC 2096231: Experimental Crystal Structure Determination

description: Related Article: Vinod Bhajammanavar, Sumitava Mallik, Venkata Surya Kumar Choutipalli, Venkatesan Subramanian, Mahiuddin Baidya|2022|Chem.Commun.|58|2188|doi:10.1039/D1CC06544K
DOI: 10.5281/zenodo.6248083
title: Transcriptomics processed data outputs for Sofen et al 2022

description: Processed data ouputs for transcripomtics analysis of Southern Ocean Time Series eukaryotic microbial communities. Files include: protein and HMM database used for iron stress biomarker screening, Proteins that hit to the HMM database curated to search the metatranscriptomic dataset for iron stress biomarker proteins with protein ID's, taxonomic annotation (EUKulele, MMTESP) and calculated transcripts per million (TPM) values, DNA-directed RNA Polymerase (RPB1) proteins used for taxonomic charecterization of the surface eukaryotic community with protein ID's, taxonomic annotation (EUKulele, MMTESP) and calculated transcripts per million (TPM) values.
DOI: 10.5281/zenodo.6248082
title: Transcriptomics processed data outputs for Sofen et al 2022

description: Processed data ouputs for transcripomtics analysis of Southern Ocean Time Series eukaryotic microbial communities. Files include: protein and HMM database used for iron stress biomarker screening, Proteins that hit to the HMM database curated to search the metatranscriptomic dataset for iron stress biomarker proteins with protein ID's, taxonomic annotation (EUKulele, MMTESP) and calculated transcripts per million (TPM) values, DNA-directed RNA Polymerase (RPB1) proteins used for taxonomic charecterization of the surface eukaryotic community with protein ID's, taxonomic annotation (EUKulele, MMTESP) and calculated transcripts per million (TPM) values.
DOI: 10.6073/pasta/0d417d173dccd7e0a16cde3ae51c7b5e
title: PBG04 Reproductive effort of Big Bluestem, Indiangrass and Little Bluestem in the Patch-Burn Grazing Experiment at Konza Prairie

description: 'PBG' datasets are associated with a long-term, large-scale study that is addressing the effects of fire-grazing interactions in the context of a Patch-Burn Grazing management system designed to promote grassland heterogeneity. Effects of patch-burn grazing management on plant and animal diversity and the nature and variety of wildlife habitat are being assessed in two replicate management units, each consisting of three pastures (watersheds) designated C03A/C03B/C03C and C3SA/C3SB/C3SC. In each patch-burn grazing unit, one watershed is burned and two that are left unburned in a given year. The burning treatments are rotated annually so that each pasture is burned every third year. Each patch-burn grazing unit is paired with an annually-burned pasture for comparison with traditional grazing systems (C01A and C1SB). All grazing units are stocked with cow/calf pairs from approximately 1 May until 1 Oct at a stocking density equal to 3.2 ha per cow/calf. To examine the impact of patch burning and grazing in all 8 units, we monitor changes in plant species composition, residual biomass, grassland bird populations, insect populations, small mammal populations, soil nutrients, and stream water quality1 (1C3SA/C3SB/C3SC unit only). The KSU Department of Animal Science monitors cattle performance, including weight gain and body condition to assess the economic feasibility of using patch-burn management on a widespread basis. PBG041 includes data on flowering stem height (m) of three dominant prairie grasses: Andropogon gerardii (ANGE), Sorghastrum nutans (SONU), and Schizachyrium scoparium (ANSC). PBG042 includes flowering stem density (no. per sq. m) and mass (grams per sq. m) for the same grass species.
DOI: 10.25345/c5nk36631
title: MassIVE Reanalysis RMSV000000354.5391 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CD300C [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5ht2gd0c
title: MassIVE Reanalysis RMSV000000354.5393 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, SHMT2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5d21rk6x
title: MassIVE Reanalysis RMSV000000354.5396 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, SNX31 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.6084/m9.figshare.19224528
title: Freshwater threats

description: Listing status for 216 freshwater fish species in the United States and water-stress and other indicators for the 48 conterminous states.
DOI: 10.6084/m9.figshare.19224528.v1
title: Freshwater threats

description: Listing status for 216 freshwater fish species in the United States and water-stress and other indicators for the 48 conterminous states.
DOI: 10.25345/c58911s1p
title: MassIVE Reanalysis RMSV000000354.5394 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, HSFY1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.