cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8378849
title: Microsatellite primers for the Green Toad, Bufotes viridis

description: Microsatellite library for the gReen toad, Bufotes viridis.<br>Methods: <br>In brief, genomic DNA was extracted from the tissue samples with a Qiagen Blood and Tissue Kit (Qiagen, Hilden, Germany), digested in three separate reactions with the restriction enzymes AluI, RsaI, and Hpy166II, and combined in equal amounts after heat inactivation of the restriction enzymes. The blunt ends were adenylated (+A) with Klenow (exo-) and dATP, and after heat inactivation of the Klenow (exo-), the reactions were supplemented with ATP to 1 mM and an Illumina Y-adaptor was ligated with T4 DNA ligase. The fragments were enriched for microsatellites by hybridisation to and magnetic capture of biotinylated repeat probes (representing two unique dimers, five unique trimers, seven unique tetramers and two unique pentamers), amplified and barcoded by PCR, and sequenced on an Illumina MiSeq instrument (2 × 250 bp paired reads). The raw reads were assembled in SeqMan NGen (version 11). The assembly was scanned for microsatellite loci and automatically designed primer pairs with the program msatcommander 1.0.8_beta (for Mac OSX). A library was constructed with minimum consecutive perfect repeat lengths of at least six (12 bp) for any dimer and at least five for any trimer, tetramer, or pentamer and PCR product size of 150–450 bp. The full library is available as supplementary information (Supplementary Table S1). Out of this library, we chose 12 loci based on following criteria (Perl et al. 2018): (i) tetrameric, (ii) repeat motif between 10 and 15, (iii) less than 1000 reads, as deep coverage could indicate multiple copies and (iv) GC content of 50 (Table 1).<br>
DOI: 10.6084/m9.figshare.8378849.v1
title: Microsatellite primers for the Green Toad, Bufotes viridis

description: Microsatellite library for the gReen toad, Bufotes viridis.<br>Methods: <br>In brief, genomic DNA was extracted from the tissue samples with a Qiagen Blood and Tissue Kit (Qiagen, Hilden, Germany), digested in three separate reactions with the restriction enzymes AluI, RsaI, and Hpy166II, and combined in equal amounts after heat inactivation of the restriction enzymes. The blunt ends were adenylated (+A) with Klenow (exo-) and dATP, and after heat inactivation of the Klenow (exo-), the reactions were supplemented with ATP to 1 mM and an Illumina Y-adaptor was ligated with T4 DNA ligase. The fragments were enriched for microsatellites by hybridisation to and magnetic capture of biotinylated repeat probes (representing two unique dimers, five unique trimers, seven unique tetramers and two unique pentamers), amplified and barcoded by PCR, and sequenced on an Illumina MiSeq instrument (2 × 250 bp paired reads). The raw reads were assembled in SeqMan NGen (version 11). The assembly was scanned for microsatellite loci and automatically designed primer pairs with the program msatcommander 1.0.8_beta (for Mac OSX). A library was constructed with minimum consecutive perfect repeat lengths of at least six (12 bp) for any dimer and at least five for any trimer, tetramer, or pentamer and PCR product size of 150–450 bp. The full library is available as supplementary information (Supplementary Table S1). Out of this library, we chose 12 loci based on following criteria (Perl et al. 2018): (i) tetrameric, (ii) repeat motif between 10 and 15, (iii) less than 1000 reads, as deep coverage could indicate multiple copies and (iv) GC content of 50 (Table 1).<br>
DOI: 10.5281/zenodo.4775398
title: Seasonal InSAR thaw subsidence and frost heave time series in central and western Spitsbergen, Svalbard

description: We used Sentinel-1 Synthetic Aperture Radar Interferometry (InSAR) to measure the ground surface displacements in the permafrost landscape of Svalbard. The InSAR products document thaw subsidence and frost heave related to the seasonal active layer thawing and freezing in 2017. The displacement time series were used to extract the timing of the seasonal thaw subsidence maxima at the regional scale. We analysed three study areas in central and western Spitsbergen (78–79°N, 11–16°E): Adventdalen (ADV), Kapp Linné (KAP) and Ny-Ålesund (NYA). The dataset consists of one .csv file for each study area, which includes June–November 2017 InSAR displacement time series, the identified subsidence maxima and their corresponding Day of Year (DOY) for all the documented pixels. Details about processing and file attributes are described in the Readme pdf document included in the dataset folder.
description: The study is part of Rouyet's Ph.D. research project FrostInSAR (2017–2021) funded by the Space Research Programme of the Research Council of Norway (grant 263005). The development of the GSAR processing chain and previous research applying InSAR in the Norwegian periglacial environment have been supported by the Norwegian Space Centre, the European Space Agency and the Research Council of Norway. L. Liu was supported by the Hong Kong Research Grants Council (CUHK14305618).
DOI: 10.5281/zenodo.4775397
title: Seasonal InSAR thaw subsidence and frost heave time series in central and western Spitsbergen, Svalbard

description: We used Sentinel-1 Synthetic Aperture Radar Interferometry (InSAR) to measure the ground surface displacements in the permafrost landscape of Svalbard. The InSAR products document thaw subsidence and frost heave related to the seasonal active layer thawing and freezing in 2017. The displacement time series were used to extract the timing of the seasonal thaw subsidence maxima at the regional scale. We analysed three study areas in central and western Spitsbergen (78–79°N, 11–16°E): Adventdalen (ADV), Kapp Linné (KAP) and Ny-Ålesund (NYA). The dataset consists of one .csv file for each study area, which includes June–November 2017 InSAR displacement time series, the identified subsidence maxima and their corresponding Day of Year (DOY) for all the documented pixels. Details about processing and file attributes are described in the Readme pdf document included in the dataset folder.
description: The study is part of Rouyet's Ph.D. research project FrostInSAR (2017–2021) funded by the Space Research Programme of the Research Council of Norway (grant 263005). The development of the GSAR processing chain and previous research applying InSAR in the Norwegian periglacial environment have been supported by the Norwegian Space Centre, the European Space Agency and the Research Council of Norway. L. Liu was supported by the Hong Kong Research Grants Council (CUHK14305618).
DOI: 10.5519/qd.ri87te2r
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (63 records)
DOI: 10.5286/isis.e.rb2010610
title: Local structure of niobate nanosheet electrodes

description: Sodium-ion batteries (NIB) have attracted interest for use in grid-storage applications, because of the high abundance and low-cost of sodium. While the chemistry of lithium and sodium are in many ways similar, a key difference is that graphite – the anode of choice for lithium-ion batteries – cannot intercalate sodium meaning that alternative anodes must be found. The performance of layered oxides anodes can be improved by tailoring the interlayer space into which sodium inserts. However, considerable structural disorder in the materials means that it is difficult to understand the atomic structure using conventional powder diffraction. Here, we propose to use pair distribution function analysis of total scattering data to look at the local structure of niobate-based nanosheet electrodes.
DOI: 10.5286/isis.e.rb2010610-1
title: Local structure of niobate nanosheet electrodes

description: Sodium-ion batteries (NIB) have attracted interest for use in grid-storage applications, because of the high abundance and low-cost of sodium. While the chemistry of lithium and sodium are in many ways similar, a key difference is that graphite – the anode of choice for lithium-ion batteries – cannot intercalate sodium meaning that alternative anodes must be found. The performance of layered oxides anodes can be improved by tailoring the interlayer space into which sodium inserts. However, considerable structural disorder in the materials means that it is difficult to understand the atomic structure using conventional powder diffraction. Here, we propose to use pair distribution function analysis of total scattering data to look at the local structure of niobate-based nanosheet electrodes.
DOI: 10.6084/m9.figshare.14626437.v1
title: Supplementary Table 3.docx

description: Co-administration of clomiphene citrate and letrozole in mild ovarian stimulation for POSEIDON Group 4 patients
DOI: 10.5286/isis.e.rb2000274
title: Neutron diffraction analysis for the characterization of copper alloy Roman finds

description: We intend to analyze a set of Roman Age bronze fragments from 2 different excavation context from Central Italy to characterize their phase composition and metal microstructure in order to infer details about their manufacturing process. They are a set of 3 gilded bronze fragments from a Statuary group and a set of 2 mirror fragments from a burial site.Non invasive analysis is mandatory for their characterization and neutron diffraction can provide the most complete level of information.
DOI: 10.5286/isis.e.rb2000274-1
title: Neutron diffraction analysis for the characterization of copper alloy Roman finds

description: We intend to analyze a set of Roman Age bronze fragments from 2 different excavation context from Central Italy to characterize their phase composition and metal microstructure in order to infer details about their manufacturing process. They are a set of 3 gilded bronze fragments from a Statuary group and a set of 2 mirror fragments from a burial site.Non invasive analysis is mandatory for their characterization and neutron diffraction can provide the most complete level of information.
DOI: 10.5286/isis.e.rb1920674
title: Local Structure in a new Class of Metastable Solid Li-ion Electrolytes

description: All-solid-state batteries based on solid electrolytes (SEs) are promising candidates for safe and high energy density Li-ion batteries. Sulphide-based electroytes proved to be exceptionally good ionic conductors, superior to many commonly used liquid electrolytes. However, the main drawback of these sulphide SEs is their poor chemical stability, especially towards lithium metal. We have synthesised a new metastable SE class that would not decompose in contact with lithium metal anodes. Nuclear magnetic resonance (NMR) and in-house powder x-ray diffraction allowed us to establish a preliminary structure model of these SEs. However, due to the low scattering intensity of lithium atoms, the location of excess Li cations is unknown. We propose to carry out high quality total neutron scattering to determine both the local and long-range structure present in these materials.
DOI: 10.5286/isis.e.rb1920674-1
title: Local Structure in a new Class of Metastable Solid Li-ion Electrolytes

description: All-solid-state batteries based on solid electrolytes (SEs) are promising candidates for safe and high energy density Li-ion batteries. Sulphide-based electroytes proved to be exceptionally good ionic conductors, superior to many commonly used liquid electrolytes. However, the main drawback of these sulphide SEs is their poor chemical stability, especially towards lithium metal. We have synthesised a new metastable SE class that would not decompose in contact with lithium metal anodes. Nuclear magnetic resonance (NMR) and in-house powder x-ray diffraction allowed us to establish a preliminary structure model of these SEs. However, due to the low scattering intensity of lithium atoms, the location of excess Li cations is unknown. We propose to carry out high quality total neutron scattering to determine both the local and long-range structure present in these materials.
DOI: 10.6084/m9.figshare.14626407.v1
title: Supplementary Table 1.docx

description: Co-administration of clomiphene citrate and letrozole in mild ovarian stimulation for POSEIDON Group 4 patients
DOI: 10.15468/jh7yjd
title: Hemigrammus ataktos: a new species from the rio Tocantins basin, central Brazil (Characiformes: Characidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Marinho, Manoela M. F., Dagosta, Fernando C. P., Birindelli, José L. O. (2014): Hemigrammus ataktos: a new species from the rio Tocantins basin, central Brazil (Characiformes: Characidae). Neotropical Ichthyology 12 (2): 257-264, DOI: 10.1590/1982-0224-20130091, URL: http://dx.doi.org/10.1590/1982-0224-20130091
DOI: 10.15468/9h3uaq
title: Revision of Ngirhaphium (Insecta: Diptera: Dolichopodidae), with the description of two new species from Singapore’s mangroves

description: This dataset contains the digitized treatments in Plazi based on the original journal article Grootaert, Patrick, Puniamoorthy, Jayanthi (2014): Revision of Ngirhaphium (Insecta: Diptera: Dolichopodidae), with the description of two new species from Singapore’s mangroves. Raffles Bulletin of Zoology 62: 146-160, DOI: http://doi.org/10.5281/zenodo.4502148
DOI: 10.5281/zenodo.4775280
title: An MDA Process with which to Generate Semantic Data from Data Requirements

description: This work proposes a process within the MDA framework that follows a roadmap for the generation of semantic data and the creation of domain ontologies, in which a semantic dataset is the result of the unification and alignment of the data in the context of its domain. Our proposal identifies four phases (from CIM to code), describing the artefacts and transformations required in order to move to the next phase: first the data and domain specifications are collected and the graphic schema and data requirements are obtained. The target domain model is then obtained from the data requirements, after which the ontological schema and ontology are generated from the aforementioned model. A domain specific language (DSL), which is defined in this work, is subsequently used to obtain the DSL code that, by means of an annotation engine also defined in this work, obtains the final semantic dataset.
DOI: 10.5281/zenodo.4775279
title: An MDA Process with which to Generate Semantic Data from Data Requirements

description: This work proposes a process within the MDA framework that follows a roadmap for the generation of semantic data and the creation of domain ontologies, in which a semantic dataset is the result of the unification and alignment of the data in the context of its domain. Our proposal identifies four phases (from CIM to code), describing the artefacts and transformations required in order to move to the next phase: first the data and domain specifications are collected and the graphic schema and data requirements are obtained. The target domain model is then obtained from the data requirements, after which the ontological schema and ontology are generated from the aforementioned model. A domain specific language (DSL), which is defined in this work, is subsequently used to obtain the DSL code that, by means of an annotation engine also defined in this work, obtains the final semantic dataset.
DOI: 10.6084/m9.figshare.14179954.v1
title: Two-tiered SARS-CoV-2 seroconversion screening in the Netherlands and stability of nucleocapsid, spike protein domain 1 and neutralizing antibodies

description: Serological testing in the COVID-19 pandemic is mainly implemented to gain sero-epidemiological data, but can also retrospectively inform about suspected SARS-CoV-2 infection. We verified and applied a two-tiered testing strategy combining a SARS-CoV-2 receptor-binding domain (RBD)-specific lateral flow assay (LFA) with a nucleocapsid protein (NCP) IgG ELISA to assess seroconversion in <i>n</i> = 7241 individuals. The majority had experienced symptoms consistent with COVID-19, but had no access to RT-PCR testing. Longitudinal follow-up in <i>n</i> = 97 LFA + individuals was performed up to 20 weeks after initial infection using NCP and spike protein S1 domain (S1) IgG ELISAs and a surrogate virus neutralization test (sVNT). Individuals reporting symptoms from January 2020 onwards showed seroconversion, as did a considerable proportion of asymptomatic individuals. Seroconversion for symptomatic and asymptomatic individuals was higher in an area with a known infection cluster compared to a low incidence area. Overall, 94% of individuals with a positive IgG result by LFA were confirmed by NCP ELISA. The proportion of ELISA-confirmed LFA results declined over time, in line with contracting NCP IgG titres during longitudinal follow-up. Neutralizing antibody activity was considerably more stable than S1 and NCP IgG titres, and both reach a plateau after approximately 100 d. The sVNT proved to be not only highly specific, but also more sensitive than the specificity-focussed two-tiered serology approach. Our results demonstrate the high specificity of two-tiered serology testing and highlight the sVNT used as a valuable tool to support modelling of SARS-CoV-2 transmission dynamics, complement molecular testing and provide relevant information to individuals.
DOI: 10.6084/m9.figshare.14179954
title: Two-tiered SARS-CoV-2 seroconversion screening in the Netherlands and stability of nucleocapsid, spike protein domain 1 and neutralizing antibodies

description: Serological testing in the COVID-19 pandemic is mainly implemented to gain sero-epidemiological data, but can also retrospectively inform about suspected SARS-CoV-2 infection. We verified and applied a two-tiered testing strategy combining a SARS-CoV-2 receptor-binding domain (RBD)-specific lateral flow assay (LFA) with a nucleocapsid protein (NCP) IgG ELISA to assess seroconversion in <i>n</i> = 7241 individuals. The majority had experienced symptoms consistent with COVID-19, but had no access to RT-PCR testing. Longitudinal follow-up in <i>n</i> = 97 LFA + individuals was performed up to 20 weeks after initial infection using NCP and spike protein S1 domain (S1) IgG ELISAs and a surrogate virus neutralization test (sVNT). Individuals reporting symptoms from January 2020 onwards showed seroconversion, as did a considerable proportion of asymptomatic individuals. Seroconversion for symptomatic and asymptomatic individuals was higher in an area with a known infection cluster compared to a low incidence area. Overall, 94% of individuals with a positive IgG result by LFA were confirmed by NCP ELISA. The proportion of ELISA-confirmed LFA results declined over time, in line with contracting NCP IgG titres during longitudinal follow-up. Neutralizing antibody activity was considerably more stable than S1 and NCP IgG titres, and both reach a plateau after approximately 100 d. The sVNT proved to be not only highly specific, but also more sensitive than the specificity-focussed two-tiered serology approach. Our results demonstrate the high specificity of two-tiered serology testing and highlight the sVNT used as a valuable tool to support modelling of SARS-CoV-2 transmission dynamics, complement molecular testing and provide relevant information to individuals.
DOI: 10.26126/intervals.n8jomg
title: FSU Color [Raw Data]
DOI: 10.34740/kaggle/dsv/2252707
title: 2021 World Population (updated daily)
DOI: 10.6084/m9.figshare.14626839
title: Lumpfish repeatabilities and interactions with salmon for Personality profiling may help select better cleaner fish for sea-lice control in salmon farming

description: Data on Lumpfish repeatabilities and interactions with salmon for MS Personality profiling may help select better cleaner fish for sea-lice control in salmon farming
DOI: 10.6084/m9.figshare.14626839.v1
title: Lumpfish repeatabilities and interactions with salmon for Personality profiling may help select better cleaner fish for sea-lice control in salmon farming

description: Data on Lumpfish repeatabilities and interactions with salmon for MS Personality profiling may help select better cleaner fish for sea-lice control in salmon farming
DOI: 10.26126/intervals.5vh2zd
title: FSU Gloss [Raw Data]
DOI: 10.26126/intervals.o34wic
title: FSU Gloss [Raw Data]
DOI: 10.15468/6hvan7
title: A new species of Hemigrammus Gill, 1858 (Characiformes: Characidae) from the rio Madeira and rio Paraguai basins, with a redescription of H. lunatus

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ota, Rafaela P., Lima, Flávio C. T., Pavanelli, Carla S. (2014): A new species of Hemigrammus Gill, 1858 (Characiformes: Characidae) from the rio Madeira and rio Paraguai basins, with a redescription of H. lunatus. Neotropical Ichthyology 12 (2): 265-279, DOI: 10.1590/1982-0224-20130176, URL: http://dx.doi.org/10.1590/1982-0224-20130176
DOI: 10.17870/bathspa.14579670
title: A Question of Identity - Research Statement

description: This item contains a research statement in support of the REF2021 Impact Case Study within the English Language and Literature Unit of Assessment (27), entitled "Writing for Young People: developing empathy in young readers and shaping the discipline, industry and next generation of writers".<br>This item is part of a Collection exploring Jo Nadin's writing for young people. Nadin’s research explores questions of empathy and identity by allowing her readers to ‘try on a new life’ through their engagement with her characters. Using the technique of writing in the first person, Nadin asks her readers to go on a journey with her protagonists.<br><b>The work is under copyright and may not be used without permission. Use of this repository acknowledges cooperation with its policies and relevant copyright law. </b><br>
DOI: 10.17870/bathspa.14579670.v1
title: A Question of Identity - Research Statement

description: This item contains a research statement in support of the REF2021 Impact Case Study within the English Language and Literature Unit of Assessment (27), entitled "Writing for Young People: developing empathy in young readers and shaping the discipline, industry and next generation of writers".<br>This item is part of a Collection exploring Jo Nadin's writing for young people. Nadin’s research explores questions of empathy and identity by allowing her readers to ‘try on a new life’ through their engagement with her characters. Using the technique of writing in the first person, Nadin asks her readers to go on a journey with her protagonists.<br><b>The work is under copyright and may not be used without permission. Use of this repository acknowledges cooperation with its policies and relevant copyright law. </b><br>
DOI: 10.5281/zenodo.4769642
title: E-commerce between cybersecurity and sustainability. European consumer behavior trends through Eurostat data

description: Every researcher is always looking for reliable data to support the study hypothesis and the greatest difficulty is to combine different sources, sometimes primary and secondary. The soundness of a research result is therefore highly sensitive to the quality of the data used. This paper describes the methodological path to collect, integrate and process data from different sources to shed light on a very topical issue: consumer sensitivity to cybersecurity concerns during e-commerce. The limits of a rigid dataset such as Eurostat's are overcome by integrating the results of European citizens' behavior during online purchases, with a survey that involved some experts appropriately selected by the research team. The combination of primary and secondary sources of data and the application of a hybrid methodological approach (MCDA (multi-criteria decision analysis), and Likert scale), allowed to extract from the data new information that fills some gaps in the literature. It emerges how European citizens correlate e-commerce with cybersecurity and sustainability, thus providing important insights for decision makers.