cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24711730
title: Table S3 from Transcriptomic responses to location learning by honeybee dancers are partly mirrored in the brains of dance-followers

description: Outputs of gene expression analyses for direction experiment
DOI: 10.6084/m9.figshare.24711730.v1
title: Table S3 from Transcriptomic responses to location learning by honeybee dancers are partly mirrored in the brains of dance-followers

description: Outputs of gene expression analyses for direction experiment
DOI: 10.6084/m9.figshare.24711733
title: Table S5 from Transcriptomic responses to location learning by honeybee dancers are partly mirrored in the brains of dance-followers

description: List of genes responding to colony of origin
DOI: 10.6084/m9.figshare.24711733.v1
title: Table S5 from Transcriptomic responses to location learning by honeybee dancers are partly mirrored in the brains of dance-followers

description: List of genes responding to colony of origin
DOI: 10.17864/1947.000514
title: Soil invertebrate and mycorrhizal activity in diverse grasslands: benefits for ecosystem service provision - PhD thesis dataset

description: Data collected for PhD thesis. The thesis aim was to identify which of the commercially viable grasslands within the Diverse Forages Project had the most positive effect on the soil biota (earthworms, mesofauna and AMF) and whether changes in belowground biota affected aboveground biomass productivity. The thesis consists of three manuscript research chapters which address the soil biodiversity research gaps identified by comparing a conventionally fertilised forage pasture to three commercially available diverse grasslands. Chapter 2 covered the changes in soil invertebrates, namely earthworms, a selection of soil mesofauna under grazed systems, and measuring arbuscular mycorrhizal (AMF) activity through trap plant root colonisation. Chapter 3 looked at overall fungal community diversity and microbial functional diversity, with modelling effects on provisioning ecosystem service delivery of aboveground biomass. And finally, Chapter 4 focused solely on AMF community’s contribution to the commercially available diverse grasslands in dry, stressed environments, suggestive of future climate change conditions.
DOI: 10.5281/zenodo.7824792
title: HySpex_2022-08-09_Trier_Empline

description: HySpex Flight over Trier, 2022-08-09.


Empirical line corrected with Spectral Evolution ground reference spectra recorded the same day.
DOI: 10.5281/zenodo.7824793
title: HySpex_2022-08-09_Trier_Empline

description: HySpex Flight over Trier, 2022-08-09.


Empirical line corrected with Spectral Evolution ground reference spectra recorded the same day.
DOI: 10.17864/1947.000516
title: Data on the presence or absence of at least one geotagged Wikipedia page and/or Flickr photo, for designated areas in England

description: Presence or absence of at least one geotagged Wikipedia page and/or at least one Flickr photo in designated areas in England. There is also information on various characteristics of each designated area (the size of the designated area, population density, distance to the closest urban centre, species richness, maximum height of the landscape in the designated area, coastal location (T/F), waterbody present (T/F), river in the designated area (T/F) and number of public transport links in the designated area).
DOI: 10.6084/m9.figshare.24711666.v1
title: Data of Spectroscopic studies of Ca-Sr, Sr-Ba, and Ca-Ba sulfate solid solutions.rar

description: Data used in the manuscript "Spectroscopic studies of Ca-Sr, Sr-Ba, and Ca-Ba sulfate solid solutions and their implication for calcium sulfate veins detections on Mars".
DOI: 10.17864/1947.000513
title: Dataset supporting paper 'Dietary n-3 polyunsaturated fatty acids alter the number, fatty acid profile and coagulatory activity of circulating and platelet-derived extracellular vesicles'

description: This dataset includes all reports and summaries of raw data supporting the results presented in the paper "Dietary n-3 polyunsaturated fatty acids alter the number, fatty acid profile and coagulatory activity of circulating and platelet-derived extracellular vesicles". The objective of this paper is to investigate whether daily supplementation of participants at moderate risk of (cardiovascular diseases) CVDs with 1.8 g/d of fish oil-derived n-3 polyunsaturated fatty acids (PUFAs) altered the generation, composition and function of circulating and platelet-derived extracellular vesicles (EVs). Data about EVs parameters include: i. the numbers, and size of circulating total EVs and in vitro generated platelet-derived EVs (PDEVs) measured by Nanoparticle Tracking Analysis (NTA); ii. the numbers of EV subpopulations (i.e. phosphatidylserine-positive EVs (PS+EVs), PDEVs, endothelial-derived EVs (EDEVs)) and PS expression on PDEVs generated in vitro from platelets measured by flow cytometry (FCM); iii. the procoagulatory activity of circulating EVs (in vitro thrombogenic potential in activating tissue factor-dependent thrombin generation) measured by thrombin generation assay. The coagulatory behaviour of PDEVs generated in vitro from platelets measured by thrombin generation, clot formation, fibrinolysis and in vivo thrombus formation assays. Data about conventional cardiovascular risk markers include i. body mass index (BMI) measured by Tanita; ii. blood pressure measured by upper arm blood pressure monitor; iii. plasma lipid profile (i.e. triacylglycerol (TAG), total cholesterol (TC), high-density lipoprotein cholesterol (HDL-C), and glucose concentrations measured by iLab. Data about thrombogenic markers include: i. plasma platelet aggregation measured by 96-well high-throughput aggregometry; ii. plasma thrombin generation measured by thrombin generation assay; iii. plasma clot growth and fibrinolysis measured by thrombodynamics analyzer.
DOI: 10.5063/f15q4tjv
title: Restoration Projects in Tampa Bay and its Watershed

description: Data include habitat restoration projects conducted in Tampa Bay and its watershed from 1971 to the present. Records prior to 2006 were compiled during the Tampa Bay Estuary Program’s Habitat Master Plan Update (HMP, 2020). Since 2006, habitat restoration data are reported to the Tampa Bay Estuary Program by regional partners and submitted each year to the US Environmental Protection Agency (EPA) through the National Estuary Program Online Reporting Tool (NEPORT) to conform to the Government Performance and Results Act (GPRA). The dataset includes information on the project name, date, location, restoration activity, habitat type, partner responsible for the project, and approximate coverage. The dataset is updated annually.
DOI: 10.6084/m9.figshare.24711775.v1
title: Supplementary U-series Ages from Meltwater pulse 1a drowned fringing-reefs around Tahiti 15 000 years ago

description: New U-series ages data from Tahiti
DOI: 10.6084/m9.figshare.24711775
title: Supplementary U-series Ages from Meltwater pulse 1a drowned fringing-reefs around Tahiti 15 000 years ago

description: New U-series ages data from Tahiti
DOI: 10.34740/kaggle/dsv/7098665
title: COVID Vaccination in World (updated daily)
DOI: 10.5517/ccdc.csd.cc2dbp1h
title: CCDC 2214796: Experimental Crystal Structure Determination

description: Related Article: Jason Holland, John Arron Stride, Mohan Bhadbhade, Ruoming Tian|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28nb3d
title: CCDC 2104903: Experimental Crystal Structure Determination

description: Related Article: Jason Holland, John Arron Stride, Mohan Bhadbhade, Ruoming Tian|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hlb5m
title: CCDC 2311520: Experimental Crystal Structure Determination

description: Related Article: Jason Holland, John Arron Stride, Mohan Bhadbhade, Ruoming Tian|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hlb6n
title: CCDC 2311521: Experimental Crystal Structure Determination

description: Related Article: Jason Holland, John Arron Stride, Mohan Bhadbhade, Ruoming Tian|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hlb7p
title: CCDC 2311522: Experimental Crystal Structure Determination

description: Related Article: Jason Holland, John Arron Stride, Mohan Bhadbhade, Ruoming Tian|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hlb8q
title: CCDC 2311523: Experimental Crystal Structure Determination

description: Related Article: Jason Holland, John Arron Stride, Mohan Bhadbhade, Ruoming Tian|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hlb9r
title: CCDC 2311524: Experimental Crystal Structure Determination

description: Related Article: Jason Holland, John Arron Stride, Mohan Bhadbhade, Ruoming Tian|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10043624
title: Dataset from paper: "Mind the Gap: Reconciling tropical forest carbon flux estimates from Earth Observation and National Reporting requires transparency"

description: This repository contains the processed data used in the publication of Heinrich et al., 2023 (Mind the Gap: Reconciling tropical forest carbon flux estimates from Earth Observation and National Reporting requires transparency). Carbon Balance and Management: https://cbmjournal.biomedcentral.com/articles/10.1186/s13021-023-00240-2 
When using this data, full reference to the raw data publications and the publication Heinrich et al., 2023 must be made.
The raw datasets used in this study are all available from their original sources.
DOI: 10.5281/zenodo.10043625
title: Dataset from paper: "Mind the Gap: Reconciling tropical forest carbon flux estimates from Earth Observation and National Reporting requires transparency"

description: This repository contains the processed data used in the publication of Heinrich et al., 2023 (Mind the Gap: Reconciling tropical forest carbon flux estimates from Earth Observation and National Reporting requires transparency). Carbon Balance and Management: https://cbmjournal.biomedcentral.com/articles/10.1186/s13021-023-00240-2 
When using this data, full reference to the raw data publications and the publication Heinrich et al., 2023 must be made.
The raw datasets used in this study are all available from their original sources.
DOI: 10.5281/zenodo.10245812
title: Data for TNO Modelchain for Groningen

description: The following files were provided by NAM:

ReservoirModel_pressures_V1_2023.csv
ReservoirModel_compressibility.csv
Groningen_field_outline.csv
Geological_zones_V6.zip
Faultdata_Groningen.sqlite3 (based on NAM data, but file created by TNO)
hazard_risk_coefficients.zip (Files in folders V5, V6, V7. Files in folder TNO2020 are provided by TNO)
The following files were provided by KNMI:

Earthquake_catalogue_01-12-2023.csv
DOI: 10.5281/zenodo.10245813
title: Data for TNO Modelchain for Groningen

description: The following files were provided by NAM:

ReservoirModel_pressures_V1_2023.csv
ReservoirModel_compressibility.csv
Groningen_field_outline.csv
Geological_zones_V6.zip
Faultdata_Groningen.sqlite3 (based on NAM data, but file created by TNO)
hazard_risk_coefficients.zip (Files in folders V5, V6, V7. Files in folder TNO2020 are provided by TNO)
The following files were provided by KNMI:

Earthquake_catalogue_01-12-2023.csv
DOI: 10.5281/zenodo.10245846
title: Linking provenance and its metadata for an AI-based computation using CPM and RO-Crate

description: This dataset is a prototype implementation of a mechanism for linking provenance information and its metadata, also called provenance of provenance or meta-provenance. This dataset is an RO-Crate that bundles artifacts of an AI-based computational pipeline. The resulting RO-Crate contains (directly or by a reference) artifacts of the pipeline execution, such as input dataset, intermediate and final results, configuration files, pipeline implementation, log files, or provenance files. The RO-Crate is based on the CPM RO-Crate profile, which integrates the Common Provenance Model (CPM) and Process Run Crate profile. The description of the AI pipeline and an explanation of how the CPM RO-Crate profile is applied to bundle the pipeline execution artifacts is provided in our previous work.


As this dataset aims to demonstrate the mechanism for linking provenance and meta-provenance, the input dataset used for the AI model training and testing is reduced only to a few images, as the size of the input dataset does not affect the mechanism. The images used in the input are from the Camelyon16 dataset.
DOI: 10.5281/zenodo.7924182
title: Linking provenance and its metadata for an AI-based computation using CPM and RO-Crate

description: This dataset is a prototype implementation of a mechanism for linking provenance information and its metadata, also called provenance of provenance or meta-provenance. This dataset is an RO-Crate that bundles artifacts of an AI-based computational pipeline. The resulting RO-Crate contains (directly or by a reference) artifacts of the pipeline execution, such as input dataset, intermediate and final results, configuration files, pipeline implementation, log files, or provenance files. The RO-Crate is based on the CPM RO-Crate profile, which integrates the Common Provenance Model (CPM) and Process Run Crate profile. The description of the AI pipeline and an explanation of how the CPM RO-Crate profile is applied to bundle the pipeline execution artifacts is provided in our previous work.


As this dataset aims to demonstrate the mechanism for linking provenance and meta-provenance, the input dataset used for the AI model training and testing is reduced only to a few images, as the size of the input dataset does not affect the mechanism. The images used in the input are from the Camelyon16 dataset.
DOI: 10.5281/zenodo.7924183
title: Linking provenance and its metadata for an AI-based computation using CPM and RO-Crate

description: This dataset is a prototype implementation of a mechanism for linking provenance information and its metadata, also called provenance of provenance or meta-provenance. This dataset is an RO-Crate that bundles artifacts of an AI-based computational pipeline. The resulting RO-Crate contains (directly or by a reference) artifacts of the pipeline execution, such as input dataset, intermediate and final results, configuration files, pipeline implementation, log files, or provenance files. The RO-Crate is based on the CPM RO-Crate profile, which integrates the Common Provenance Model (CPM) and Process Run Crate profile. The description of the AI pipeline and an explanation of how the CPM RO-Crate profile is applied to bundle the pipeline execution artifacts is provided in our previous work. As this dataset aims to demonstrate the mechanism for linking provenance and meta-provenance, the input dataset used for the AI model training and testing is reduced only to a few images, as the size of the input dataset does not affect the mechanism. The images used in the input are from the Camelyon16 dataset.
DOI: 10.58119/ulg/adyejf
title: TopUp Docker

description: This a lightweight Docker containerized version of the FSL's "TopUp" tool, cf. https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/topup
DOI: 10.25375/uct.24653415
title: Data available for input to an Age Structured Production Model of the Tristan lobster fishery.

description: An age-structured production model (ASPM) is developed for the rock lobster populations at each of the four islands of the Tristan da Cunha group (Tristan, Inaccessible, Nightingale and Gough Islands).The ASPM model is sex-disaggregated as there are substantial differences in growth rates and hence lengths at age between the sexes.The model is fit to GLM- or GLMM-standardised longline CPUE and catch-at-length data. A catch series for each island is used. Although commercial harvesting first began in 1949, the ASPM models are run from 1990 because of considerable uncertainties regarding pre-1990 catches and related problems encountered with model-fitting when the models are initiated in 1949.
DOI: 10.25375/uct.24653415.v1
title: Data available for input to an Age Structured Production Model of the Tristan lobster fishery.

description: An age-structured production model (ASPM) is developed for the rock lobster populations at each of the four islands of the Tristan da Cunha group (Tristan, Inaccessible, Nightingale and Gough Islands).The ASPM model is sex-disaggregated as there are substantial differences in growth rates and hence lengths at age between the sexes.The model is fit to GLM- or GLMM-standardised longline CPUE and catch-at-length data. A catch series for each island is used. Although commercial harvesting first began in 1949, the ASPM models are run from 1990 because of considerable uncertainties regarding pre-1990 catches and related problems encountered with model-fitting when the models are initiated in 1949.
DOI: 10.6084/m9.figshare.24657471
title: Supplementary Material for: Idiopathic Granulomatous Orbital Inflammation with Right Frontal Nerve Involvement: A Case Report

description: Introduction Idiopathic granulomatous orbital inflammation is a rare subtype of orbital inflammatory disease and frontal nerve involvement has not been previously described. Case Presentation This is a case of a 75-year-old female who presented with a four-week history of a right orbital mass, scalp dysaesthesia and ptosis. Magnetic resonance imaging of the orbits confirmed a right supraorbital mass originating from the lacrimal gland with frontal nerve enlargement. Biopsy showed non-caseating granulomatous inflammation. Conclusion The patient was treated with an intralesional triamcinolone injection and oral prednisolone, and will continue to be monitored for development of systemic sarcoidosis.
DOI: 10.6084/m9.figshare.24657471.v1
title: Supplementary Material for: Idiopathic Granulomatous Orbital Inflammation with Right Frontal Nerve Involvement: A Case Report

description: Introduction Idiopathic granulomatous orbital inflammation is a rare subtype of orbital inflammatory disease and frontal nerve involvement has not been previously described. Case Presentation This is a case of a 75-year-old female who presented with a four-week history of a right orbital mass, scalp dysaesthesia and ptosis. Magnetic resonance imaging of the orbits confirmed a right supraorbital mass originating from the lacrimal gland with frontal nerve enlargement. Biopsy showed non-caseating granulomatous inflammation. Conclusion The patient was treated with an intralesional triamcinolone injection and oral prednisolone, and will continue to be monitored for development of systemic sarcoidosis.
DOI: 10.6084/m9.figshare.24516808
title: Supplementary Material for: Association between Obesity and periodontitis in US Adults: NHANES 2011–2014

description: Introduction: It is controversial whether obesity and periodontitis are related. A representative U.S. population was examined for the relationship between obesity and periodontitis. Methods: In the National Health and Nutrition Examination Survey (NHANES) 2011-2014, participants (n = 6662)aged 30 or older and underwent periodontal examinations were chosen for analysis. An assessment of obesity was based on body mass index (BMI) and waist circumference (WC). Estimates of obesity and periodontal disease were made using univariate and multivariate logistic regression models. Results: According to an adjusted odds ratio (OR) for periodontitis,BMI (OR=1.01, 95%CI: 1.01~1.02) and WC (OR=1.01, 95%CI: 1~1.01) were significantly associated with periodontitis, respectively. After adjusting for confounding factors, the OR for patients with high WC with periodontitis was 1.18 (1.04~1.33) compared to normal WC. BMI and WC subgroups showed no significant interaction (P for interaction &gt; 0.05), except for the age interaction in BMI. Among young adults aged 30 to 44, obesity was significantly associated with periodontitis in subgroups, the adjusted OR for having periodontal disease were 1.02 (1~1.03) and 1.01 (1~1.02) for subjects with BMI, and WC, respectively. When all covariates were adjusted, BMI ≥ 30 kg/m2 was statistically significantly associated with prevalence of periodontal disease among people aged 30 to 44 (P &lt;0.001). Conclusions: BMI and WC are significantly associated with periodontitis, even after adjusting for many variables, and were equally significant in obese (BMI≥30 kg/m2 ) young people (30 to 44 years).