cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qqurz4
title: Occurrence Download

description: A dataset containing 306960 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amphibia",
 "BasisOfRecord is one of (Human Observation, Machine Observation)",
 "HasGeospatialIssue is false",
 "DistanceFromCentroidInMeters is greater than or equal to 2000",
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "CoordinateUncertaintyInMeters is less than 10000",
 "Year is 2023",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "SpeciesKey is not null",
 "ClassKey is not null",
 "Country is not null"
 ]
}

 The dataset includes 306960 records from 200 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106610-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25959214
title: High seed losses in mountain birch (<i>Betula pubescens</i> ssp. <i>tortuosa</i>) and developmental, ecological, and environmental correlates

description: These data were collected for and used in the research article titled "High seed losses in mountain birch (<i>Betula pubescens</i> ssp. <i>tortuosa</i>) and developmental, ecological, and environmental correlates".Authors: Guðrún Óskarsdóttir, Thóra E. Thórhallsdóttir, Kristín Svavarsdóttir.The data describes seed counts and visual appearance for the sampled seed rain and soil seed bank of a mountain birch (<i>Betula pubescens</i> ssp. <i>tortuosa</i>) population on Skeiðarársandur glacial outwash plain in southeast Iceland, as well as the visual appearance, germination, development, and size of seeds sampled from trees. Data were gathered from 2017 to 2020, but the intensity of sampling, seed handling, and inclusion of data from neighbouring populations for comparison varies between years. See research article for details regarding study design, data collection, and analyses.
DOI: 10.6084/m9.figshare.25959214.v1
title: High seed losses in mountain birch (<i>Betula pubescens</i> ssp. <i>tortuosa</i>) and developmental, ecological, and environmental correlates

description: These data were collected for and used in the research article titled "High seed losses in mountain birch (<i>Betula pubescens</i> ssp. <i>tortuosa</i>) and developmental, ecological, and environmental correlates".Authors: Guðrún Óskarsdóttir, Thóra E. Thórhallsdóttir, Kristín Svavarsdóttir.The data describes seed counts and visual appearance for the sampled seed rain and soil seed bank of a mountain birch (<i>Betula pubescens</i> ssp. <i>tortuosa</i>) population on Skeiðarársandur glacial outwash plain in southeast Iceland, as well as the visual appearance, germination, development, and size of seeds sampled from trees. Data were gathered from 2017 to 2020, but the intensity of sampling, seed handling, and inclusion of data from neighbouring populations for comparison varies between years. See research article for details regarding study design, data collection, and analyses.
DOI: 10.5281/zenodo.13384474
title: Hyperspectral environmental illumination maps for outdoor and indoor scenes

description: This repository contains a dataset of hyperspectral illumination maps collected from 6 outdoor and 4 indoor scenes.

 

If you use this dataset in your research, please cite:

 

Takuma Morimoto, João M. M. Linhares, Sérgio M. C. Nascimento, and Hannah E. Smithson, “How many surfaces can you distinguish by color? Real environmental lighting increases discriminability of surface colors,” Optics Express (in press).

 

Technical details about data acquisition are described in:

 

Takuma Morimoto, Sho Kishigami, João M.M. Linhares, Sérgio M.C. Nascimento, and Hannah E. Smithson, “Hyperspectral environmental illumination maps: characterizing directional spectral variation in natural environments,” Optics Express, 27, 22, 32277 - 32293. (2019). https://doi.org/10.1364/OE.27.032277

 

Each file includes the following formats:

 



png: RGB image for visualization.

mat: Hyperspectral image with wavelengths from 400 nm to 700 nm in 10 nm steps. Each pixel value represents spectral radiance in W m−2 sr−1 nm−1. The image and wavelength range are stored in the variables ‘radiance’ and ‘wls’, respectively.


The images have an average spatial resolution of 1019 (height) × 2035 (width) across 10 scenes.

File names follow the format X_sceneY, where X is the scene type (outdoor or indoor) and Y is the scene number.

 

For Python users, the mat file can be loaded using e.g. scipy.io.loadmat. More information: https://docs.scipy.org/doc/scipy/reference/generated/scipy.io.loadmat.html

 

Note: To use for hyperspectral renderings (e.g., Mitsuba), convert the hyperspectral image to the OpenEXR format.
DOI: 10.5281/zenodo.13384475
title: Hyperspectral environmental illumination maps for outdoor and indoor scenes

description: This repository contains a dataset of hyperspectral illumination maps collected from 6 outdoor and 4 indoor scenes.

 

If you use this dataset in your research, please cite:

 

Takuma Morimoto, João M. M. Linhares, Sérgio M. C. Nascimento, and Hannah E. Smithson, “How many surfaces can you distinguish by color? Real environmental lighting increases discriminability of surface colors,” Optics Express (in press).

 

Technical details about data acquisition are described in:

 

Takuma Morimoto, Sho Kishigami, João M.M. Linhares, Sérgio M.C. Nascimento, and Hannah E. Smithson, “Hyperspectral environmental illumination maps: characterizing directional spectral variation in natural environments,” Optics Express, 27, 22, 32277 - 32293. (2019). https://doi.org/10.1364/OE.27.032277

 

Each file includes the following formats:

 



png: RGB image for visualization.

mat: Hyperspectral image with wavelengths from 400 nm to 700 nm in 10 nm steps. Each pixel value represents spectral radiance in W m−2 sr−1 nm−1. The image and wavelength range are stored in the variables ‘radiance’ and ‘wls’, respectively.


The images have an average spatial resolution of 1019 (height) × 2035 (width) across 10 scenes.

File names follow the format X_sceneY, where X is the scene type (outdoor or indoor) and Y is the scene number.

 

For Python users, the mat file can be loaded using e.g. scipy.io.loadmat. More information: https://docs.scipy.org/doc/scipy/reference/generated/scipy.io.loadmat.html

 

Note: To use for hyperspectral renderings (e.g., Mitsuba), convert the hyperspectral image to the OpenEXR format.
DOI: 10.34943/835f9b35-4e43-48c9-9c9a-414bc8268920
title: Patricia Bay Conductivity Temperature Depth Deployed 2008-03-01

description: The Alec Electronics CTW 0003 was deployed on 2008-03-01 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/0b71f08c-1348-4040-a20a-3a622ba7d2a8
title: Patricia Bay Conductivity Temperature Depth Deployed 2008-09-28

description: The Alec Electronics CTW 0003 was deployed on 2008-09-28 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/58d99ce2-af9b-4e69-898b-7ff0d16d2122
title: Patricia Bay Junction Box Deployed 2009-02-15

description: The S30003 was deployed on 2009-02-15 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Junction Box. Junction Boxes supply power and communications to deployed instruments. Junction boxes have a number of serial and ethernet ports, including 400V ethernet ports that enable connections to other junction boxes and high-voltage instruments. Junction boxes can convert high voltages to lower voltages (15V, 24V or 48V) required by many instruments. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/8a6a2264-d64d-4572-9839-15071cd42f03
title: Patricia Bay Junction Box Deployed 2009-09-30

description: The S30003 was deployed on 2009-09-30 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Junction Box. Junction Boxes supply power and communications to deployed instruments. Junction boxes have a number of serial and ethernet ports, including 400V ethernet ports that enable connections to other junction boxes and high-voltage instruments. Junction boxes can convert high voltages to lower voltages (15V, 24V or 48V) required by many instruments. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/cd6e51c1-ed02-4a3d-a91c-38f6aa135b7a
title: Patricia Bay Conductivity Temperature Depth Deployed 2008-02-27

description: The Sea-Bird SeaCAT SBE16plus 4997 was deployed on 2008-02-27 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/2d1843af-c37b-4cc8-acc8-42ab52cebaca
title: Patricia Bay Conductivity Temperature Depth Deployed 2007-09-12

description: The Sea-Bird SeaCAT SBE16plus 4997 was deployed on 2007-09-12 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.15468/dl.c9mvdy
title: Occurrence Download

description: A dataset containing 13055 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Emberiza caesia Cretzschmar, 1827",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 13055 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106639-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34943/77a32295-4f42-4fd6-91ef-1a06e76616b7
title: Patricia Bay Conductivity Temperature Depth Deployed 2009-09-30

description: The Sea-Bird SeaCAT SBE16plus 4997 was deployed on 2009-09-30 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/7ec0b284-3f0a-4ee5-b1cb-87ea1db32d46
title: Patricia Bay Conductivity Temperature Depth Deployed 2010-02-21

description: The Sea-Bird SeaCAT SBE16plus 4997 was deployed on 2010-02-21 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/0a070d61-e54f-4731-8e93-ded36c20ebf2
title: Strait of Georgia East Conductivity Temperature Depth Deployed 2011-05-11

description: The Sea-Bird SeaCAT SBE16plus 4997 was deployed on 2011-05-11 at Strait of Georgia East. Strait of Georgia East refers to an eastern area of the Strait of Georgia. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/946c845c-3f5c-40a4-ba02-1b69ea453366
title: Strait of Georgia East Conductivity Temperature Depth Deployed 2011-10-03

description: The Sea-Bird SeaCAT SBE16plus 4997 was deployed on 2011-10-03 at Strait of Georgia East. Strait of Georgia East refers to an eastern area of the Strait of Georgia. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/4f91d166-0ad0-412a-95fb-5b1e19bfd0c6
title: Patricia Bay Conductivity Temperature Depth Deployed 2013-05-06

description: The Sea-Bird SeaCAT SBE16plus 4997 was deployed on 2013-05-06 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/2a358c19-3df3-4bd6-9766-c837e8c17882
title: Strait of Georgia East Conductivity Temperature Depth Deployed 2012-08-30

description: The Sea-Bird SeaCAT SBE16plus 4997 was deployed on 2012-08-30 at Strait of Georgia East. Strait of Georgia East refers to an eastern area of the Strait of Georgia. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/e4afeddb-f321-4a86-a415-8daf9537ba13
title: Saanich Inlet Sill Conductivity Temperature Depth Deployed 2014-06-25

description: The Sea-Bird SeaCAT SBE16plus 4997 was deployed on 2014-06-25 at Saanich Inlet Sill. Saanich Inlet Sill is a shallow bottom feature in the Saanich Inlet. The sill influences flow of oxygenated water and seasonal cycles. This device is a Conductivity Temperature Depth. Conductivity Temperature Depth (CTD) is an instrument package that contains sensors for measuring the conductivity, temperature, and pressure of seawater. Salinity, sound velocity, depth and density are variables that can be derived from sensor measurements. CTDs can carry additional instruments and sensors such as oxygen sensors, turbidity sensors and fluorometers. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/d7087131-bb22-4680-891e-2464f1298789
title: Patricia Bay Oxygen Sensor Deployed 2008-02-27

description: The Aanderaa Optode 4175 (S/N 579) was deployed on 2008-02-27 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/2f76fc4e-2f9a-42fb-afa5-6008a379cbf2
title: Patricia Bay Oxygen Sensor Deployed 2008-09-28

description: The Aanderaa Optode 4175 (S/N 579) was deployed on 2008-09-28 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/37577129-2178-4f10-bf7d-53c22328bddc
title: Patricia Bay Oxygen Sensor Deployed 2007-09-12

description: The Aanderaa Optode 4175 (S/N 579) was deployed on 2007-09-12 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/f104d349-27b0-403d-842c-f48a317101e0
title: Patricia Bay Oxygen Sensor Deployed 2009-02-15

description: The Aanderaa Optode 4175 (S/N 579) was deployed on 2009-02-15 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/fcb799e3-8975-418f-8e93-2ba64845f59b
title: Patricia Bay Oxygen Sensor Deployed 2010-02-20

description: The Aanderaa Optode 4175 (S/N 579) was deployed on 2010-02-20 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/04466bbc-5559-4bc6-8e2a-6f396c0d9b0c
title: Strait of Georgia East Oxygen Sensor Deployed 2011-05-10

description: The Aanderaa Optode 4175 (S/N 579) was deployed on 2011-05-10 at Strait of Georgia East. Strait of Georgia East refers to an eastern area of the Strait of Georgia. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/674ff5f8-f95f-4ec9-8da7-4c6eb0036569
title: Strait of Georgia East Oxygen Sensor Deployed 2011-12-12

description: The Aanderaa Optode 4175 (S/N 579) was deployed on 2011-12-12 at Strait of Georgia East. Strait of Georgia East refers to an eastern area of the Strait of Georgia. This device is a Oxygen Sensor. Oxygen sensors measure dissolved oxygen concentration in seawater. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.