cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.2sy42b
title: Occurrence Download

description: A dataset containing 440 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Psilopezia nummularia Berk., Psora globifera (Ach.) A.Massal.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 440 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250649-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.byker3
title: Occurrence Download

description: A dataset containing 158 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Desmomys harringtoni (Thomas, 1902))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 158 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073360-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zj7ehh
title: Occurrence Download

description: A dataset containing 4515 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pterigynandrum filiforme Hedw., Pteris grandifolia L.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 4515 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250669-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sspvb3
title: Occurrence Download

description: A dataset containing 1329 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cardioderma cor (Peters, 1872))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1329 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073363-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rkvpgb
title: Occurrence Download

description: A dataset containing 19487 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Human Observation"
 ]
 },
 "TaxonKey is Sympetrum corruptum (Hagen, 1861)"
 ]
}

 The dataset includes 19487 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250977-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejj86j
title: Occurrence Download

description: A dataset containing 286 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Silene grayi S.Watson"
 ]
}

 The dataset includes 286 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0129281-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4w4gu4
title: Occurrence Download

description: A dataset containing 737 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Boa constrictor Linnaeus, 1758",
 "Year 2000-2024"
 ]
}

 The dataset includes 737 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010432-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bs5hqb
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gymnanthemum bellinghamii (S.Moore) H.Rob."
 ]
}

 The dataset includes 109 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028969-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d2sv85
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphorbia tithymaloides subsp. angustifolia (Poit.) V.W.Steinm."
 ]
}

 The dataset includes 125 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073387-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9xayz7
title: Occurrence Download

description: A dataset containing 440 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Psilopezia nummularia Berk., Psora globifera (Ach.) A.Massal.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 440 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250650-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sc5nwj
title: Occurrence Download

description: A dataset containing 1118423 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Benin",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1118423 records from 527 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010169-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18112/openneuro.ds004604.v2.0.0
title: Cerebrovascular Reactivity Normative Dataset
DOI: 10.5281/zenodo.13740339
title: Evolution and amplification of the trehalose-6-phosphate synthase gene family in Theaceae
DOI: 10.5281/zenodo.13740340
title: Evolution and amplification of the trehalose-6-phosphate synthase gene family in Theaceae
DOI: 10.5281/zenodo.13740121
title: Modified land cover georeference data based on ESA Worldcover 2021
DOI: 10.5281/zenodo.13740122
title: Modified land cover georeference data based on ESA Worldcover 2021
DOI: 10.15468/dl.6z9yeu
title: Occurrence Download

description: A dataset containing 233384 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Scardinius erythrophthalmus (Linnaeus, 1758)"
 ]
}

 The dataset includes 233384 records from 472 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010168-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13353631
title: dataset of the meet-URO 15 trial, three related publications

description: dataset of the meet-URO 15 trial, three related publications:



A red blood cell-based score in the prognostication of patients with metastatic RCC of the Meet-URO 15 study.

Sodium levels and immunotherapy efficacy in mRCC patients with bone metastases: sub analysis of Meet-Uro 15 study.

Long-term responders to nivolumab in previously treated advanced renal cell carcinoma: a sub-analysis of meet-URO15 study.
DOI: 10.5281/zenodo.13353632
title: dataset of the meet-URO 15 trial, three related publications

description: dataset of the meet-URO 15 trial, three related publications:



A red blood cell-based score in the prognostication of patients with metastatic RCC of the Meet-URO 15 study.

Sodium levels and immunotherapy efficacy in mRCC patients with bone metastases: sub analysis of Meet-Uro 15 study.

Long-term responders to nivolumab in previously treated advanced renal cell carcinoma: a sub-analysis of meet-URO15 study.
DOI: 10.15468/dl.5vxhrv
title: Occurrence Download

description: A dataset containing 153 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-11.52047 13.00191,-11.23668 13.00191,-11.23668 13.2225,-11.52047 13.2225,-11.52047 13.00191))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 153 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010170-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5kcjq
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "DatasetKey is Banc de dades de biodiversitat de Catalunya-MolusCat",
 "TaxonKey is Helicella A.Férussac, 1821"
 ]
}

 The dataset includes 31 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010172-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ytxdu
title: Occurrence Download

description: A dataset containing 186 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rupicapra pyrenaica ornata Neumann, 1899"
 ]
}

 The dataset includes 186 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010173-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rg2epz
title: Occurrence Download

description: A dataset containing 276 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Geometry POLYGON((48.26964 -18.56826,48.24063 -18.5967,48.23978 -18.64164,48.2631 -18.66297,48.29126 -18.66354,48.31316 -18.6479,48.31458 -18.60438,48.3143 -18.59158,48.26964 -18.56826))",
 "Geometry POLYGON((48.26794 -18.54863,48.21845 -18.59044,48.22158 -18.64676,48.24689 -18.69795,48.31913 -18.69795,48.32937 -18.66382,48.32767 -18.5657,48.26794 -18.54863))",
 "Geometry POLYGON((48.32877 -18.52766,48.21329 -18.53107,48.21784 -18.72277,48.33389 -18.72049,48.32877 -18.52766))"
 ]
 },
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 276 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010174-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13644601
title: Data products for Unresolved lensed SNe Ia in LSST (arxiv: 2404.15389)

description: This data release is a part of arxiv 2404.15389. If needed, the ipython notebooks to analyse these datasets are availble at https://github.com/deltasata/Unresolved_LSNeIa_in_LSST

There are two zip files stemming from two directories.

1. unresolved_catalog: contains the catalogs of lensed type-Ia supernovae (LSNe Ia) -- all and unresolved ones, separately. The notebook at the following path can provides statistics of the unresolved systems (please place the notebook in the same directory).https://github.com/deltasata/Unresolved_LSNeIa_in_LSST/tree/main/unresolved_stat

There are two subdirectories: (i) catalog data:  contains two catalogs - one listing all LSNe Ia expected over 10 effective years of LSST observations, and another specifically detailing the unresolved systems. See the "unresolved_catalog/catalog data/read_me.txt" for more details. There is also a subdirectory called "down_sampled_data" which contains details of the downsampled unresolved LSNe Ia systems. It is needed for running the ipython notebook.(ii) save_micro_mag_res: needed for running the ipython notebook.

2. build_blended_lc: contains necessary data files to create blended light curves for the unresolved systems. The subdirectory, "ML_downsampled_data" contains microlensed light curves for the downsampled unresolved LSNeIa. The file "Good_cadence_systems_fiveSigmaDepth_riyz.pkl" contains multi-band cadence distributions from the LSST baseline3.2 observing strategy.The required codes are availble at:https://github.com/deltasata/Unresolved_LSNeIa_in_LSST/tree/main/build_blended_lcplease put all the codes from the above in the same directory (build_blended_lc).

 

References:



Bag, S. et al 2024, arxiv:2404.15389

Oguri, M. & Marshall, P. J. 2010, MNRAS, 405, 2579

Oguri, M. 2018, MNRAS, 480, 3842
DOI: 10.5281/zenodo.13644602
title: Data products for Unresolved lensed SNe Ia in LSST (arxiv: 2404.15389)

description: This data release is a part of arxiv 2404.15389. If needed, the ipython notebooks to analyse these datasets are availble at https://github.com/deltasata/Unresolved_LSNeIa_in_LSST

There are two zip files stemming from two directories.

1. unresolved_catalog: contains the catalogs of lensed type-Ia supernovae (LSNe Ia) -- all and unresolved ones, separately. The notebook at the following path can provides statistics of the unresolved systems (please place the notebook in the same directory).https://github.com/deltasata/Unresolved_LSNeIa_in_LSST/tree/main/unresolved_stat

There are two subdirectories: (i) catalog data:  contains two catalogs - one listing all LSNe Ia expected over 10 effective years of LSST observations, and another specifically detailing the unresolved systems. See the "unresolved_catalog/catalog data/read_me.txt" for more details. There is also a subdirectory called "down_sampled_data" which contains details of the downsampled unresolved LSNe Ia systems. It is needed for running the ipython notebook.(ii) save_micro_mag_res: needed for running the ipython notebook.

2. build_blended_lc: contains necessary data files to create blended light curves for the unresolved systems. The subdirectory, "ML_downsampled_data" contains microlensed light curves for the downsampled unresolved LSNeIa. The file "Good_cadence_systems_fiveSigmaDepth_riyz.pkl" contains multi-band cadence distributions from the LSST baseline3.2 observing strategy.The required codes are availble at:https://github.com/deltasata/Unresolved_LSNeIa_in_LSST/tree/main/build_blended_lcplease put all the codes from the above in the same directory (build_blended_lc).

 

References:



Bag, S. et al 2024, arxiv:2404.15389

Oguri, M. & Marshall, P. J. 2010, MNRAS, 405, 2579

Oguri, M. 2018, MNRAS, 480, 3842
DOI: 10.15468/dl.rg7n47
title: Occurrence Download

description: A dataset containing 167 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rupicapra pyrenaica ornata Neumann, 1899",
 "BasisOfRecord is Human Observation",
 "Country is Italy",
 "HasCoordinate is true",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 167 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010177-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u726rn
title: Occurrence Download

description: A dataset listing the 55 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-11.52047 13.00191,-11.23668 13.00191,-11.23668 13.2225,-11.52047 13.2225,-11.52047 13.00191))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 55 records were derived from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010171-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aykkyg
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rupicapra pyrenaica ornata Neumann, 1899",
 "BasisOfRecord is Human Observation",
 "Country is Italy",
 "HasCoordinate is true",
 "Year is greater than or equal to 1900",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 169 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010179-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.34dy4s
title: Occurrence Download

description: A dataset containing 268 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Geometry POLYGON((48.26437 -18.70788,48.33632 -18.70788,48.33632 -18.56367,48.26437 -18.56367,48.26437 -18.70788))",
 "Geometry POLYGON((48.24142 -18.72494,48.36423 -18.72494,48.36423 -18.55344,48.24142 -18.55344,48.24142 -18.72494))"
 ]
 },
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 268 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010180-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uzrp9s
title: Occurrence Download

description: A dataset containing 94281 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Vertical and horizontal environmental DNA (eDNA) patterns of fish in a shallow and well-mixed North Sea area"
 ]
}

 The dataset includes 94281 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010178-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q8wdu2
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Acronicta strigosa (Denis & Schiffermüller), 1775"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010181-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.7397063
title: Data archive for 'Automated river barrier detection evidences severe habitat fragmentation of the megadiverse Mekong River '

description: This repository contains the data used in the paper 'Automated river barrier detection evidences severe habitat fragmentation of the megadiverse Mekong River'. The 'FCOS' folder contains the python file of the barrier detection model (FCOS ResNext-101-2x-FPN) which used to train and detect river barriers from remotely sensed photographic images in the MMDetection framework. The 'R_script' folder contains R files used in the paper. Coordinate.R was used to extract coordinate from bounding boxes in each TIF image. CAFI.R was used to calculate the CAFI index in each sub-catchment. For more information on the MMDetection, refer to the following GitHub repository: https://github.com/open-mmlab/mmdetection
DOI: 10.5281/zenodo.7928088
title: Data archive for 'Convolutional neural networks facilitate river barrier detection and evidence severe habitat fragmentation in the Mekong River biodiversity hotspot'

description: This repository contains the code and database used in the paper 'Convolutional neural networks facilitate river barrier detection and evidence severe habitat fragmentation in the Mekong River biodiversity hotspot'. The 'FCOS' folder contains Python files of the barrier detection model (FCOS ResNext-101-FPN) which was trained to detect river barriers from remotely sensed photographic images in the MMDetection framework. The 'R_script' folder contains R files used in the paper. Coordinate.R was used to extract coordinates from bounding boxes in each TIF image. CAFI.R was used to calculate the CAFI index in each sub-catchment. The 'Barrier Database' folder contains the 'Training Validation Database' used during the training process, and the 'Mekong River Barrier Database' generated in the study. For more information on the MMDetection framework, refer to the following GitHub repository: https://github.com/open-mmlab/mmdetection