cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive121534.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5517/ccdc.csd.cc2mmr34
title: CCDC 2432046: Experimental Crystal Structure Determination

description: Related Article: Tao Huang, Li-E Wang, Wei-Hong Duan, Yan-Fei Niu, Yi-Yuan Peng, Qiu-Ping Ding, Xing-Ping Zeng|2025|J.Org.Chem.|||doi:10.1021/acs.joc.5c02449
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mmr45
title: CCDC 2432047: Experimental Crystal Structure Determination

description: Related Article: Tao Huang, Li-E Wang, Wei-Hong Duan, Yan-Fei Niu, Yi-Yuan Peng, Qiu-Ping Ding, Xing-Ping Zeng|2025|J.Org.Chem.|||doi:10.1021/acs.joc.5c02449
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mn9yk
title: CCDC 2432599: Experimental Crystal Structure Determination

description: Related Article: Jinghao Wu, Chen‐Zhe Yun, Wei Jia, Tian‐Yang Yu, Lianjie Zhai|2025|Chem.Asian J.|20|e70240|doi:10.1002/asia.70240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.q75yv6
title: Occurrence Download

description: A dataset containing 6160 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Menidia peninsulae (Goode & Bean, 1879)"
 ]
}

 The dataset includes 6160 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000410-250324175209820/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7tass
title: Occurrence Download

description: A dataset containing 2002455 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gonepteryx rhamni (Linnaeus, 1758))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1981",
 "Geometry POLYGON((-30 25,50 25,50 75,-30 75,-30 25))"
 ]
}

 The dataset includes 2002455 records from 3433 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000391-250324175209820/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3819259_d1.v1
title: Additional file 1: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: Cynara cardunculus accessions used in this study. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.c.3819259_d1
title: Additional file 1: of Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

description: Cynara cardunculus accessions used in this study. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.c.3823258_d1.v1
title: MOESM10 of Activation of the alpha-globin gene expression correlates with dramatic upregulation of nearby non-globin genes and changes in local and large-scale chromatin spatial structure

description: Additional file 10: Table S4. Sequences of primers and TaqMan probes used for the 3C analysis. Sequences of primers used for FISH probe amplification.
DOI: 10.6084/m9.figshare.c.3823258_d1
title: MOESM10 of Activation of the alpha-globin gene expression correlates with dramatic upregulation of nearby non-globin genes and changes in local and large-scale chromatin spatial structure

description: Additional file 10: Table S4. Sequences of primers and TaqMan probes used for the 3C analysis. Sequences of primers used for FISH probe amplification.
DOI: 10.15468/dl.qhnsu8
title: Occurrence Download

description: A dataset containing 1187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Entelurus aequoreus (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 1187 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040314-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3827551_d3.v1
title: Additional file 3: Table S3. of A novel Alzheimerâ  s disease drug candidate targeting inflammation and fatty acid metabolism

description: Metabolomic profile of plasma. This table includes the significantly changed metabolites found in the plasma between the AD and control groups, as well as the vehicle- and CAD-31-treated groups. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3831253_d2.v1
title: Additional file 2: of Assessment of genome annotation using gene function similarity within the gene neighborhood

description: Cthermocellum_oldannotation.txt. The old annotation of C. thermocellum. (TXT 364Â kb)
DOI: 10.6084/m9.figshare.c.3831253_d2
title: Additional file 2: of Assessment of genome annotation using gene function similarity within the gene neighborhood

description: Cthermocellum_oldannotation.txt. The old annotation of C. thermocellum. (TXT 364Â kb)
DOI: 10.6084/m9.figshare.c.3835903_d1.v1
title: Additional file 1: Table S1. of Complete genome sequence of the sand-sediment actinobacterium Nocardioides dokdonensis FR1436T

description: Genes associated with steroid metabolism. (XLSX 14Â kb)
DOI: 10.6084/m9.figshare.c.3835903_d1
title: Additional file 1: Table S1. of Complete genome sequence of the sand-sediment actinobacterium Nocardioides dokdonensis FR1436T

description: Genes associated with steroid metabolism. (XLSX 14Â kb)
DOI: 10.6084/m9.figshare.c.3836809_d1.v1
title: Additional file 1: S1. of The interplay between individual social behavior and clinical symptoms in small clustered groups

description: Data on proximity and symptoms records. (TXT 21495Â kb)
DOI: 10.15468/dl.6mq78r
title: Occurrence Download

description: A dataset containing 290 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Entosphenus tridentatus (Richardson, 1836)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 290 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040315-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3838855_d3
title: MOESM3 of A quantitative and qualitative comparison of illumina MiSeq and 454 amplicon sequencing for genotyping the highly polymorphic major histocompatibility complex (MHC) in a non-model species

description: Additional file 2. Additional file contains details of the number of MHC class I alleles detected in each sample in the study.
DOI: 10.6084/m9.figshare.c.3841138_d1.v1
title: Additional file 1: of Development of the organisational health literacy responsiveness (Org-HLR) framework in collaboration with health and social services professionals

description: Online concept mapping statements. This file contains the list of 117 unique statements that were identified by the research team, after removing duplicate statements from the 1206 statements generated by participants during the online concept mapping process. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3841138_d1
title: Additional file 1: of Development of the organisational health literacy responsiveness (Org-HLR) framework in collaboration with health and social services professionals

description: Online concept mapping statements. This file contains the list of 117 unique statements that were identified by the research team, after removing duplicate statements from the 1206 statements generated by participants during the online concept mapping process. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3841159_d1.v1
title: Additional file 1: of Does one size really fit all? The effectiveness of a non-diagnosis-specific integrated mental health care program in Germany in a prospective, parallel-group controlled multi-centre trial

description: Results of logistic mixed-effects regression models including diagnosis group. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.c.3845836_d4.v1
title: Additional file 4: Table S2. of Regulation of gene expression in roots of the pH-sensitive Vaccinium corymbosum and the pH-tolerant Vaccinium arboreum in response to near neutral pH stress using RNA-Seq

description: Sequence similarity-based annotation of blueberry gene models. Annotations obtained from proteins in the TrEMBL database for plants and Arabidopsis thaliana sequences in NCBI. Arabidopsis descriptions include, when available, enzyme and pathway information from KEGG and AraCyc [90]. (TXT 7236 kb)
DOI: 10.6084/m9.figshare.c.3845836_d4
title: Additional file 4: Table S2. of Regulation of gene expression in roots of the pH-sensitive Vaccinium corymbosum and the pH-tolerant Vaccinium arboreum in response to near neutral pH stress using RNA-Seq

description: Sequence similarity-based annotation of blueberry gene models. Annotations obtained from proteins in the TrEMBL database for plants and Arabidopsis thaliana sequences in NCBI. Arabidopsis descriptions include, when available, enzyme and pathway information from KEGG and AraCyc [90]. (TXT 7236 kb)
DOI: 10.6084/m9.figshare.c.3845836_d5.v1
title: Additional file 5: Table S3. of Regulation of gene expression in roots of the pH-sensitive Vaccinium corymbosum and the pH-tolerant Vaccinium arboreum in response to near neutral pH stress using RNA-Seq

description: Enrichment analysis of GO terms. Genes showing differential expression in VA (A) and VC (B) were subjected to singular enrichment analysis in AgriGO. The table contains output from the analysis performed using the combination AgriGO and REVIGO tools. GO terms with FDR
DOI: 10.6084/m9.figshare.c.3845836_d5
title: Additional file 5: Table S3. of Regulation of gene expression in roots of the pH-sensitive Vaccinium corymbosum and the pH-tolerant Vaccinium arboreum in response to near neutral pH stress using RNA-Seq

description: Enrichment analysis of GO terms. Genes showing differential expression in VA (A) and VC (B) were subjected to singular enrichment analysis in AgriGO. The table contains output from the analysis performed using the combination AgriGO and REVIGO tools. GO terms with FDR
DOI: 10.6084/m9.figshare.c.3845836_d6.v1
title: Additional file 6: Table S4. of Regulation of gene expression in roots of the pH-sensitive Vaccinium corymbosum and the pH-tolerant Vaccinium arboreum in response to near neutral pH stress using RNA-Seq

description: Summary of discussed genes. Collection of genes present in discussion organized by function. The columns represent category/gene ID, description of best UniProt protein homolog, description of best Arabidopsis protein homolog, log fold change (FC) in V. arboreum and logFC in V. corymbosum. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3851779_d3
title: Additional file 3: of Bortezomib treatment induces a higher mortality rate in lupus model mice with a higher disease activity

description: is a table presenting significantly increased or decreased genes among the proteasome ubiquitin pathway, GADD45 signaling, and DNA damage induced 14-3-3 signaling. The genes which were significantly increased with Bz treatment and belong to the gene set of the proteasome ubiquitin pathway, and the genes which were significantly increased with Cyc treatment and belong to the gene set of GADD45 signaling and DNA damage induced 14-3-3 signaling were extracted with IPA analysis. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3851767_d11
title: Additional file 3: of Development of pathogenicity predictors specific for variants that do not comply with clinical guidelines for the use of computational evidence

description: Pathogenic variants. Each line corresponds to a variant, providing: the amino acid replacement and its location in the protein sequence, the UniProt code for the protein, the values of the contribution of the three biochemical/biophysical properties (Blosum62 elements, position specific scoring matrix elements and Shannon’s entropy) followed by the output of the pathogenicity predictions for the reference methods used in this work (for PolyPhen-2 we give the output of its two versions –HDIV and HVAR- although in this work we only used HDIV predictions), and ‘?’ is given when no output was provided by the method. The last column gives the dataset where the variant belongs, either VS228 or VS2168. (CSV 1616 kb)
DOI: 10.6084/m9.figshare.c.3851767_d12
title: Additional file 4: of Development of pathogenicity predictors specific for variants that do not comply with clinical guidelines for the use of computational evidence

description: Neutral variants. Each line corresponds to a variant, providing: the amino acid replacement and its location in the protein sequence, the UniProt code for the protein, the values of the contribution of the three biochemical/biophysical properties (Blosum62 elements, position specific scoring matrix elements and Shannon’s entropy) followed by the output of the pathogenicity predictions for the reference methods used in this work (for PolyPhen-2 we give the output of its two versions –HDIV and HVAR- although in this work we only used HDIV predictions), and ‘?’ is given when no output was provided by the method. The last column gives the dataset where the variant belongs, either VS228 or VS2168. (ZIP 5531 kb)
DOI: 10.6084/m9.figshare.c.3851767_d12.v1
title: Additional file 4: of Development of pathogenicity predictors specific for variants that do not comply with clinical guidelines for the use of computational evidence

description: Neutral variants. Each line corresponds to a variant, providing: the amino acid replacement and its location in the protein sequence, the UniProt code for the protein, the values of the contribution of the three biochemical/biophysical properties (Blosum62 elements, position specific scoring matrix elements and Shannon’s entropy) followed by the output of the pathogenicity predictions for the reference methods used in this work (for PolyPhen-2 we give the output of its two versions –HDIV and HVAR- although in this work we only used HDIV predictions), and ‘?’ is given when no output was provided by the method. The last column gives the dataset where the variant belongs, either VS228 or VS2168. (ZIP 5531 kb)
DOI: 10.6084/m9.figshare.c.3851794_d1.v1
title: MOESM1 of Anaemia in pregnancy and associated factors: a cross sectional study of antenatal attendants at the Sunyani Municipal Hospital, Ghana

description: Additional file 1. Anaemia in pregnancy-Sunyani.
DOI: 10.6084/m9.figshare.c.3851794_d1
title: MOESM1 of Anaemia in pregnancy and associated factors: a cross sectional study of antenatal attendants at the Sunyani Municipal Hospital, Ghana

description: Additional file 1. Anaemia in pregnancy-Sunyani.
DOI: 10.15468/dl.esv3dz
title: Occurrence Download

description: A dataset containing 174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eopsetta jordani (Lockington, 1879)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 174 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040316-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3855595_d2.v1
title: Additional file 2: Table S2. of Sex and tissue specific gene expression patterns identified following de novo transcriptomic analysis of the Norway lobster, Nephrops norvegicus

description: Full list of sex-specific transcripts. (XLSX 1280Â kb)
DOI: 10.6084/m9.figshare.c.3855595_d2
title: Additional file 2: Table S2. of Sex and tissue specific gene expression patterns identified following de novo transcriptomic analysis of the Norway lobster, Nephrops norvegicus

description: Full list of sex-specific transcripts. (XLSX 1280Â kb)
DOI: 10.6084/m9.figshare.c.3857893_d2.v1
title: Additional file 2: of SG-ADVISER mtDNA: a web server for mitochondrial DNA annotation with data from 200 samples of a healthy aging cohort

description: A spreadsheet consisting of all the phenotypic information for the 200 Wellderly individuals. (XLSX 86Â kb)
DOI: 10.6084/m9.figshare.c.3859300_d2.v1
title: Additional file 2: of Genomic analysis of methanogenic archaea reveals a shift towards energy conservation

description: Genes in Msph. cuniculi not in other Methanosphaera. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3859300_d2
title: Additional file 2: of Genomic analysis of methanogenic archaea reveals a shift towards energy conservation

description: Genes in Msph. cuniculi not in other Methanosphaera. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3859300_d3.v1
title: Additional file 3: of Genomic analysis of methanogenic archaea reveals a shift towards energy conservation

description: Genes in Mcor. parvum not in other Methanocorpusculum. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3859300_d3
title: Additional file 3: of Genomic analysis of methanogenic archaea reveals a shift towards energy conservation

description: Genes in Mcor. parvum not in other Methanocorpusculum. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3860554_d1.v1
title: Additional file 1: of The porcine translational research database: a manually curated, genomics and proteomics-based research resource

description: Porcine genes missing in Ensembl build 10.2 of the porcine genome. Gene names and evidence/source for RNA sequence of genes that are missing from Ensembl build 10.2. (XLSX 112 kb)
DOI: 10.6084/m9.figshare.c.3860554_d1
title: Additional file 1: of The porcine translational research database: a manually curated, genomics and proteomics-based research resource

description: Porcine genes missing in Ensembl build 10.2 of the porcine genome. Gene names and evidence/source for RNA sequence of genes that are missing from Ensembl build 10.2. (XLSX 112 kb)
DOI: 10.6084/m9.figshare.c.3860470_d11
title: Additional file 9: of Physical mapping of QTL for tuber yield, starch content and starch yield in tetraploid potato (Solanum tuberosum L.) by means of genome wide genotyping by sequencing and the 8.3 K SolCAP SNP array

description: SolCAP SNPs in 117 genes associated with TSC in the PIN184 population. (XLSX 38 kb)
DOI: 10.6084/m9.figshare.c.3860557_d3.v1
title: Additional file 3: of Costs and expected gain in lifetime health from intensive care versus general ward care of 30,712 individual patients: a distribution-weighted cost-effectiveness analysis

description: Data file. Norwegian ICU cohort, 2008–2010. (CSV 1472 kb)
DOI: 10.15468/dl.pwnw8f
title: Occurrence Download

description: A dataset containing 141 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ephippion guttifer (Bennett, 1831)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 141 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040317-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3860557_d3
title: Additional file 3: of Costs and expected gain in lifetime health from intensive care versus general ward care of 30,712 individual patients: a distribution-weighted cost-effectiveness analysis

description: Data file. Norwegian ICU cohort, 2008–2010. (CSV 1472 kb)
DOI: 10.6084/m9.figshare.c.3860563_d1.v1
title: Additional file1: of Empirical advances with text mining of electronic health records

description: Empirical Advances with, Annex 1, The physiotherapy corpus, content: the 2616 remaining de-identified textual clinical narratives of the 1015 residentsâ   sample in French (XLS 233 kb)
DOI: 10.6084/m9.figshare.c.3860554_d2.v1
title: Additional file 2: of The porcine translational research database: a manually curated, genomics and proteomics-based research resource

description: Artifactually duplicated genes in Ensembl build 10.2. Gene names, Ensembl and NCBI loci numbers and NCBI genome build 10.2 coordinates of artifactually duplicated genes (XLSX 282 kb)
DOI: 10.6084/m9.figshare.c.3861682_d9
title: MOESM7 of Screening and evolution of a novel protist xylose isomerase from the termite Reticulitermes speratus for efficient xylose fermentation in Saccharomyces cerevisiae

description: Additional file 7: Table S3. List of plasmids.
DOI: 10.6084/m9.figshare.c.3861763_d3.v1
title: MOESM3 of Partially local three-way alignments and the sequence signatures of mitochondrial genome rearrangements

description: Additional file 3. Breakpoint alignments. Machine readable breakpoint alignments for all gene order rearrangements in animal mitochondria. Stockholm alignment format.
DOI: 10.6084/m9.figshare.c.3861763_d3
title: MOESM3 of Partially local three-way alignments and the sequence signatures of mitochondrial genome rearrangements

description: Additional file 3. Breakpoint alignments. Machine readable breakpoint alignments for all gene order rearrangements in animal mitochondria. Stockholm alignment format.
DOI: 10.6084/m9.figshare.c.3864289_d1.v1
title: Additional file 1: Table S1. of The widespread biting midge Culicoides impunctatus (Ceratopogonidae) is susceptible to infection with numerous Haemoproteus (Haemoproteidae) species

description: Morphometric parameters of ookinetes of four Haemoproteus species in the biting midge Culicoides impunctatus. Measurements are given in micrometres. Table S2 Morphometric parameters of oocysts of four Haemoproteus species in the biting midge Culicoides impunctatus. Measurements are given in micrometres. Table S3 Morphometric parameters of sporozoites of four Haemoproteus species in the biting midge Culicoides impunctatus. Measurements are given in micrometres. (XLS 36 kb)
DOI: 10.6084/m9.figshare.c.3864259_d15.v1
title: Additional file 9: of 
                     Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project

description: Alignment results of 16S rRNA gene V4 region sequence of 13 O. formigenes strains, 3 O. formigenes-associated OTUs, and O. vicrioformis. (TXT 14 kb)