cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18742/rdm01-765
title: Time-evolving Weiss fields in the stochastic approach to quantum spins

description: Data for figures in paper Phys. Rev. B 104, 024408 (2021): text files and Python files
DOI: 10.25550/3-hxmc
title: MusMorph: a database of standardized mouse morphology data for morphometric meta-analyses

description: Complex morphological traits are the product of many genes with transient or lasting developmental effects that interact in anatomical context. Mouse models are a key resource for disentangling such effects, because they offer myriad tools for manipulating the genome in a controlled environment. Unfortunately, phenotypic data are often obtained using laboratory-specific protocols, resulting in self-contained datasets that are difficult to relate to one another for larger scale analyses. To enable meta-analyses of morphological variation, particularly in the craniofacial complex and brain, we created MusMorph, a database of standardized mouse morphology data spanning a variety of genotypes and developmental stages, including E10.5, E11.5, E14.5-15.5, E18.5, and adulthood. To standardize data collection, we implemented an atlas-based phenotyping pipeline that combines techniques from image registration, deep learning, and morphometrics. Alongside stage-specific atlases, we provide rigidly aligned micro-computed tomography images, dense anatomical landmarks, and segmentations (if available) for each specimen (N=10,146). Our workflow is completely open-source to encourage transparency and reproducible data collection. The MusMorph data and scripts are available on FaceBase [www.facebase.org](www.facebase.org) and GitHub [https://github.com/jaydevine/MusMorph](https://github.com/jaydevine/MusMorph).
DOI: 10.6084/m9.figshare.13560455
title: Exploring the impact of under-reported cases on the COVID-19 spatiotemporal distributions using healthcare workers infection data

description: dataset and coding
DOI: 10.6084/m9.figshare.13560455.v3
title: Exploring the impact of under-reported cases on the COVID-19 spatiotemporal distributions using healthcare workers infection data

description: dataset and coding
DOI: 10.6084/m9.figshare.13560455.v2
title: Spatiotemporal Estimation of COVID-19 Outbreak Using Infection Data of Healthcare Workers

description: dataset and coding
DOI: 10.5281/zenodo.5507081
title: 2021 UN Open GIS Challenge 1 - Training on Satellite Data Analysis and Machine Learning with QGIS (Satellite_QGIS)

description: This dataset is part of the 2021 UN Open GIS Challenge 1 - Training on Satellite Data Analysis and Machine Learning with QGIS (Satellite_QGIS), Exercise 1: Supervised Change Detection: Monitoring deglaciation in Huascaran, Peru. The folder structure is the following: Clip: clipped images to the region of interest Images: original images from Landsat 8, Sentinel-1 and Sentinel-2 satellites. Preprocess: pre-processed images. Reports: classification reports of the generated masks. Results: classification maps. RGB_Compositions: true color RGB compositions. Stacks: multiband rasters with all bands stacked from Landsat 8 satellite.
DOI: 10.5281/zenodo.5235435
title: Self-organized pattern formation increases local diversity in metacommunities: code and data

description: Code and data to reproduce the results published in the article "Self-organized pattern formation increases local diversity in metacommunities" (Ecology Letters, https://doi.org/10.1111/ele.13880).
DOI: 10.5281/zenodo.5235434
title: Self-organized pattern formation increases local diversity in metacommunities: code and data

description: Code and data to reproduce the results published in the article "Self-organized pattern formation increases local diversity in metacommunities" (Ecology Letters, https://doi.org/10.1111/ele.13880).
DOI: 10.5281/zenodo.5512004
title: kipoi test prediction for APARENT/veff predictions

description: During nightly tests, this file will be downloaded and compared against the predictions made by the kipoi model
DOI: 10.5281/zenodo.5512003
title: kipoi test prediction for APARENT/veff predictions

description: During nightly tests, this file will be downloaded and compared against the predictions made by the kipoi model
DOI: 10.18742/rdm01-13
title: Model Optimisation for Feature--Class allocation using MDEOptimiser - A TTC 2016 Submission

description: This dataset contains the results of experimental runs of the MDEOptimiser tool as described in the corresponding paper submitted to TTC 2016 (the Transformation Tool Contest associated to the STAF conference in Vienna). The tool uses evolutionary optimisation algorithms directly on software models (expressed using the MDE approach to software modelling) to solve multi-objective optimisation problems. In this case, the problem was the class—feature allocation problem and the solutions presented are for five specific instances of this problem as were given with the TTC challenge case.Related publication: A. Burdusel, S. Zschaler:  Model Optimisation for Feature--Class allocation using MDEOptimiser: A TTC 2016 Submission. Accepted at TTC’16, 2016. To be published.
DOI: 10.6084/m9.figshare.16627891
title: Supplementary Material for: Effectiveness of Long-Term Treatment of Multiple Myeloma in Regular Care: Comparison of a Longitudinal and a Cross-Sectional Analysis Approach

description: <b><i>Introduction:</i></b> New drugs for multiple myeloma have considerably increased the options for consecutive treatment lines in regular care. Official treatment guidelines still discuss several regimens per line, and therefore, current practice is of topical interest. Large cross-sectional studies revealed a greater than linear loss of patients reaching consecutive treatment lines of ever decreasing effectiveness. <b><i>Methods:</i></b> In a longitudinal approach, we analyzed data of all 145 multiple myeloma patients treated in our outpatient clinic in Germany between January 1, 2012, and December 31, 2019, using a time-to-event analysis with death as competitive risk. <b><i>Results:</i></b> The estimated incidences of reaching the 2nd, 3rd, 4th, and 5th lines of therapy were 88, 66, 44, and 30%, respectively. Median times to subsequent treatment lines were 34, 18, 14, 13, and 15 months, respectively. <b><i>Discussion:</i></b> Percentages of patients reaching later therapy lines were considerably greater than predicted by cross-sectional studies and median times after the 1st line did not suggest a further decrease in effectiveness, while use of new drug regimens was similar to that reported in cross-sectional studies. <b><i>Conclusion:</i></b> Effectiveness of later therapy lines appears to be underestimated by cross-sectional analyses, and the conveyed focus on 1st-line treatment for multiple myeloma needs to be scrutinized.
DOI: 10.5285/634ee206-258f-4b47-9237-efff4ef9eedd
title: Polarimetric ApRES data on a profile across Dome C, East Antarctica, 2013-2014

description: The radar data collected in 2013-2014 at Dome C, East Antarctica, aims to understand bulk preferred crystal orientation fabric near a dome. We measure changes in englacial birefringence and anisotropic scattering in 21 sites along a 36 km long profile across Dome C. These optical properties are obtained by analysing radar returns for different antenna orientations. More details can be found in Ershadi et al, 2021. Funding was provided by BAS National Capability and IPEV core funding.
description: The optical properties of the englacial ice at each site where obtained by comparing the return with four orthogonal antenna orientations. If we define H as the direction perpendicular to the East-West profile described by the sites, and V the parallel direction to the profile; and we label each of the measurements with the two orientations of the transmitting and receiving antennas; the four orthogonal antenna orientations are HH,HV,VH and VV. The spatial resolution is determined by the location of the sites, 21 in a 36 km profile. The distance between sites is closer near Dome C, about 500 m, than farther away, 3 km or so. The vertical resolution depends on the quality of the radar return but it is related to the wavelength of the signal on ice, about 0.4 m.
description: Radar: ApRES (British Antarctic Survey's Autonomous phase-sensitive Radio-Echo Sounder) - chirps of 200 to 400 MHz in time intervals of 1 s, with 8 m between antennas. Model RMB1B SN012. (More details in the file headers.)
description: The quality of the data is similar in all the sites. It varies mainly with depth: In the top 2000 m the return is consistently above the noise level. Below 2000 m, the return signal is weak, apart from some isolated reflectors, up to the bedrock that is clear in all the records. The parallel antenna configuration measurements, HH and VV, have larger signal-to-noise ratio, than the perpendicular ones, HV and VH. This is because of experimental design as system configuration is identical in all the antenna orientations.
DOI: 10.5517/ccdc.csd.cc27zjb3
title: CCDC 2084915: Experimental Crystal Structure Determination

description: Related Article: Felix Krämer, Martin S Luff, Udo Radius, Florian Weigend, Frank Breher|2021|Eur.J.Inorg.Chem.|2021|3591|doi:10.1002/ejic.202100446
DOI: 10.5517/ccdc.csd.cc27zjc4
title: CCDC 2084916: Experimental Crystal Structure Determination

description: Related Article: Felix Krämer, Martin S Luff, Udo Radius, Florian Weigend, Frank Breher|2021|Eur.J.Inorg.Chem.|2021|3591|doi:10.1002/ejic.202100446
DOI: 10.5517/ccdc.csd.cc27zjd5
title: CCDC 2084917: Experimental Crystal Structure Determination

description: Related Article: Felix Krämer, Martin S Luff, Udo Radius, Florian Weigend, Frank Breher|2021|Eur.J.Inorg.Chem.|2021|3591|doi:10.1002/ejic.202100446
DOI: 10.5517/ccdc.csd.cc27zjf6
title: CCDC 2084918: Experimental Crystal Structure Determination

description: Related Article: Felix Krämer, Martin S Luff, Udo Radius, Florian Weigend, Frank Breher|2021|Eur.J.Inorg.Chem.|2021|3591|doi:10.1002/ejic.202100446
DOI: 10.5517/ccdc.csd.cc28cwxg
title: CCDC 2096806: Experimental Crystal Structure Determination

description: Related Article: Rima Gheribi, Djebar Hadji, Rochdi Ghallab, Meriem Medjani, Meriem Benslimane, Chahrazed Trifa, Georges Dénès, Hocine Merazig|2022|J.Mol.Struct.|1248|131392|doi:10.1016/j.molstruc.2021.131392
DOI: 10.6084/m9.figshare.16627903
title: Pure Ti, tensile data at RT and LN2

description: Original tensile data of Ti-Al-O alloys at both room temperature and cryogenic temperature.
DOI: 10.5281/zenodo.4883298
title: Behavioural and physiological responses to thermal stress in a social spider

description: Temperature is one of the primary environmental drivers of the distribution of species, and particularly high temperatures challenge physiological processes by disruption of cellular homeostasis. This exerts selection on organisms to maintain cellular homeostasis by adaptive physiological and behavioural responses. The social spider Stegodyphus dumicola is distributed across several climate zones in Southern Africa, and experience high and variable temperatures. Using a common garden design, we investigate adaptive heat stress responses (behavioural thermoregulation and cuticle wax composition) in populations from warmer and cooler temperature niches, and assess evolutionary (fixed) and plastic variation in these traits. Temperature tolerance surpassed 49°C, which is lethal for most ectotherms, with individuals from the warmer location exhibiting the highest tolerance, consistent with local adaptation to environmental conditions. Analyses of cuticle wax revealed compositions consistent with a higher melting temperature (increased chain length and lower occurrence of branching) and therefore better water proofing, both in spiders originating from the warmer location and in spiders acclimated at a higher temperature. This may indicate local adaptation, and very interesting also plastic adjustments over short time scales, as expected if temperature drives changes in cuticle wax composition to conserve water. Spiders exhibited a clear escape response from simulated increasing lethal temperatures, with individuals from a warmer location and kept at higher acclimation temperature showing a lower threshold at which this behaviour was triggered. This corroborates the prediction that stressful temperatures drive both local adaptation and phenotypic plasticity in behavioural thermoregulation. The Bogert-effect predicts that behavioural thermoregulation may relax selection for physiological adaptations, however the presence of adaptive physiological responses in heat tolerance and cuticle wax composition despite the presence of behavioural thermoregulation does not support this prediction. We propose that synergistic effects of multiple adaptive traits shape the thermal biology of species and facilitate the occupancy of different temperature niches.
DOI: 10.5281/zenodo.4883297
title: Behavioural and physiological responses to thermal stress in a social spider

description: Temperature is one of the primary environmental drivers of the distribution of species, and particularly high temperatures challenge physiological processes by disruption of cellular homeostasis. This exerts selection on organisms to maintain cellular homeostasis by adaptive physiological and behavioural responses. The social spider Stegodyphus dumicola is distributed across several climate zones in Southern Africa, and experience high and variable temperatures. Using a common garden design, we investigate adaptive heat stress responses (behavioural thermoregulation and cuticle wax composition) in populations from warmer and cooler temperature niches, and assess evolutionary (fixed) and plastic variation in these traits. Temperature tolerance surpassed 49°C, which is lethal for most ectotherms, with individuals from the warmer location exhibiting the highest tolerance, consistent with local adaptation to environmental conditions. Analyses of cuticle wax revealed compositions consistent with a higher melting temperature (increased chain length and lower occurrence of branching) and therefore better water proofing, both in spiders originating from the warmer location and in spiders acclimated at a higher temperature. This may indicate local adaptation, and very interesting also plastic adjustments over short time scales, as expected if temperature drives changes in cuticle wax composition to conserve water. Spiders exhibited a clear escape response from simulated increasing lethal temperatures, with individuals from a warmer location and kept at higher acclimation temperature showing a lower threshold at which this behaviour was triggered. This corroborates the prediction that stressful temperatures drive both local adaptation and phenotypic plasticity in behavioural thermoregulation. The Bogert-effect predicts that behavioural thermoregulation may relax selection for physiological adaptations, however the presence of adaptive physiological responses in heat tolerance and cuticle wax composition despite the presence of behavioural thermoregulation does not support this prediction. We propose that synergistic effects of multiple adaptive traits shape the thermal biology of species and facilitate the occupancy of different temperature niches.
DOI: 10.5281/zenodo.5512006
title: Predicting the crossmodal correspondences of odors using an electronic nose

description: Underlying perceptual and chemical data for the article "Predicting the crossmodal correspondences of odors using an electronic nose". Odour Recordings There are 100 recordings in total of 10 different essential oils; five were from Mystic Moments™ (caramel, cherry, coffee, freshly cut grass, and pine) and five from Miaroma™ (black pepper, lavender, lemon, orange, and peppermint).<br> Each recording is 10 minutes in duration (600 seconds). Columns in each of the .csv files are in the following order: time, air quality, pollution level, temperature, pressure, humidity, gas, MQ3, MQ5, MQ9, and HCHO. The file's name denotes the odour being recorded and the record number (1 - 10).<br> For more information, please view the publication - R.J. Ward, S. Rahman, S.M. Wuerger, A. Marshall, Predicting the crossmodal correspondences of odors using an electronic nose. <br> Perceptual Data The underlying perceptual data used from R.J. Ward, S.M. Wuerger, A. Marshall, Smelling Sensations: Olfactory Crossmodal Correspondences, J. Percept. Imaging. 4 (2021) 1–12. https://doi.org/10.2352/j.percept.imaging.2021.4.2.020402.<br> The data used from the later paper is the (angularity of shapes, smoothness of texture, perceived pleasantness, pitch, and the colour ratings in L*a*b* space).<br> Each file contains the raw perceptual ratings for the ten different odours (columns) from sixty-eight different participants (rows) in the following order: black pepper, caramel, cherry, coffee, freshly cut grass, lavender, lemon, orange, peppermint, and pine.<br> NOTE: the pitch ratings only contain data from sixy participants due to it being added to the experiment at a later date. If you use this data please cite the following papers; Perceptual Data<br> R.J. Ward, S.M. Wuerger, A. Marshall, Smelling Sensations: Olfactory Crossmodal Correspondences, J. Percept. Imaging. 4 (2021) 1–12. https://doi.org/10.2352/j.percept.imaging.2021.4.2.020402 Chemical Data<br> R. Ward, S. Rahman, S. Wuerger, A. Marshall, Predicting the colour associated with odours using an electronic nose, in: 1st Work. Multisensory Exp. - SensoryX’21, 2021: pp. 1–6. https://doi.org/10.5753/sensoryx.2021.15683.<br> R.J. Ward, S. Rahman, S.M. Wuerger, A. Marshall, Predicting the crossmodal correspondences of odors using an electronic nose, (under review as of file upload).<br>
DOI: 10.23729/e5bc0a9b-31af-47ef-8271-61a96bed22f6
title: Dhok Pathan sandstone

description: The two large sandstone samples are from the same piece. The sample comes from the Dhok Pathan Formation of Trans-Indus Ranges (northwest Himalaya), Pakistan. The age of the formation is approx. 7.9-5.1 Ma (Johnson et al., 1982). The sample preserves distinct sets of Riedel deformation bands. The purpose of scanning the sample is to understand the 3D geometry and kinematic evolution of these deformation bands. To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:b928a0c4-e44b-44a7-ab70-1e9e303e6bf7
DOI: 10.23729/ac65e73d-3361-4b31-a363-58c4b4cdcfb7
title: Dhok Pathan sandstone, ROI scan

description: The two large sandstone samples are from the same piece. The sample comes from the Dhok Pathan Formation of Trans-Indus Ranges (northwest Himalaya), Pakistan. The age of the formation is approx. 7.9-5.1 Ma (Johnson et al., 1982). The sample preserves distinct sets of Riedel deformation bands. The purpose of scanning the sample is to understand the 3D geometry and kinematic evolution of these deformation bands. To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:9150e631-47c6-4c25-9e2b-89f34ef4de2e
DOI: 10.23729/b802003a-b065-43c2-9248-2682796684c9
title: Kato Moni bentonite

description: Various samples of Kato Moni bentonite from Cyprus. Samples are discussed in detail in: Reijonen, H., Kuva, J., Heikkilä, P. 2020. Benefits of applying X-ray computed tomography in bentonite based material research focussed on geological disposal of radioactive waste. Environmental Science and Pollution Research. doi: 10.1007/s11356-020-08151-2 To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:61761e53-1b25-42af-a377-e6dfc6c34a15
DOI: 10.23729/0b69a7fc-894f-4f51-8ed5-935219abefcd
title: Dhok Pathan sandstone, small sample

description: The two large sandstone samples are from the same piece. The sample comes from the Dhok Pathan Formation of Trans-Indus Ranges (northwest Himalaya), Pakistan. The age of the formation is approx. 7.9-5.1 Ma (Johnson et al., 1982). The sample preserves distinct sets of Riedel deformation bands. The purpose of scanning the sample is to understand the 3D geometry and kinematic evolution of these deformation bands. To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:33c1413e-a3f9-4020-b042-10211ada514a
DOI: 10.23729/a8aa4e56-2767-48c1-b020-6056bcef0028
title: Oolitic limestone drill core

description: This core was taken from Iford Manor, Wiltshire, UK. It is a sample taken from a medieval-aged, re-used, stone block that was used by Harold Peto to construct the Cloisters in the creation of his famous Grade 1 Listed Italian Gardens at Iford. This particular sample was chosen because it has a calcite-filled cavity exposed at the surface, and it was imaged by X-CT to see how the cavity behaved internally. The rock is Jurassic in age. The core was taken as part of remediation project of the Cloisters. Interesting Oolitic structures and porosity also visible in the 3D images. To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:876352f5-2fc6-45ea-b450-cc918126c5c6
DOI: 10.23729/946222f2-1371-41a8-b290-9d36431d2c86
title: Nautajärvi lake sediment

description: Lakebed sediment from Nautajärvi, Finland. More info can be found from: Ojala, A.E.K. and Alenius, T., 10 000 years of interannual sedimentation recorded in the Lake Nautajärvi (Finland) clastic-organic varves, 2005, Palaeography, Palaeoclimatology, Palaeoecology 219(3-4) and Ojala, A.E.K., Launonen, I., Holmström, L, Tiljander, M., Effects of solar forcing and North Atlantic oscillation on the climate of continental Scandinavia during the Holocene, 2015, Quaternary Science Reviews 112. To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:a9935dd0-6c7a-41eb-b281-163011a2e07c
DOI: 10.23729/699f219b-4c39-4985-9618-2a420ed84748
title: Nurmijärvi lake sediment

description: Lakebed sediment from Nurmijärvi, Finland. More info can be found from: Ojala, A.E.K., Mattila, J., Virtasalo, J., Kuva, J., Luoto, T.P., 2019. Seismic deformation of varved sediments in southern Fennoscandia at 7400?cal BP. Tectonophysics 744. and Ojala, A.E.K., Luoto, T.P., Virtasalo, J.J., 2017, Establishing a high-resolution surface sediment chronology with multiple dating methods – Testing 137-Cs determination with Nurmijärvi clastic-biogenic varves. Quaternary Geochronology 37. To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:c96b922e-6cf8-46ef-a9a9-a05a28d4e147
DOI: 10.23729/218c8226-1821-4dc5-b024-eebbeb1f0583
title: Suaspalo till samples

description: Till samples from Suaspalo, Finland. Used to investigate rock orientation and therefore glacial movements. More information in Ojala, A.E.K., Mattila, J., Ruskeeniemi, T., Palmu, J-P., Nordbäck, N., Kuva, J., Sutinen, R., 2019. Postglacial reactivation of the Suasselkä PGF complex in SW Finnish Lapland. International Journal of Earth Sciences 108. To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:35c285db-c26c-4be9-994c-e75b74062a81
DOI: 10.23729/01e9e212-f919-474c-82a0-19c7f1e17ced
title: Lieksa iron meteorite.

description: First ever iron meteorite discovered in Finland. It was discovered from Lieksa in 2017. To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:e3f69db5-fcdc-4790-9003-d7959f6f373d
DOI: 10.23729/4adc40e2-34e6-4cb2-aad7-c13c2d946f11
title: Feldkamp artefact test sample

description: Commercial test sample QRM_MDP-36, built to highlight Feldkamp artefacts in CT imaging, imaged with two different magnifications and in a tilted angle. To get this dataset, please contact fairdata-pas@gtk.fi. Preview dataset found at http://urn.fi/urn:nbn:fi:att:0d4a707d-9199-42d8-aab7-3e5f599c0ad8