cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18375523
title: Replication data for "NUTS-2 level SSP-coherent population projections by age and sex"

description: Replication Dataset: Subnational Disaggregation of SSP-Coherent Population Projections for Europe (NUTS2 Level, Age-Sex Structured)

This dataset provides the complete input data files required to fully replicate the subnational population projection exercise described in the accompanying GitHub repository: NUTS2_SSPs_AgeSex_proj.
DOI: 10.5281/zenodo.18375524
title: Replication data for "NUTS-2 level SSP-coherent population projections by age and sex"

description: Replication Dataset: Subnational Disaggregation of SSP-Coherent Population Projections for Europe (NUTS2 Level, Age-Sex Structured)

This dataset provides the complete input data files required to fully replicate the subnational population projection exercise described in the accompanying GitHub repository: NUTS2_SSPs_AgeSex_proj.
DOI: 10.5281/zenodo.18235194
title: A shift in the cellular redox state redirects aspartate for export under glucose deprivation
DOI: 10.5281/zenodo.18235195
title: A shift in the cellular redox state redirects aspartate for export under glucose deprivation
DOI: 10.5281/zenodo.18011170
title: A Curated Dataset of Computer Science Research Papers (2020–2024)

description: This dataset provides a curated and cleaned collection of Computer Science research papers collected from the Crossref REST API. The dataset was constructed using a keyword-driven retrieval strategy targeting major Computer Science subfields.
DOI: 10.5281/zenodo.18011171
title: A Curated Dataset of Computer Science Research Papers (2020–2024)

description: This dataset provides a curated and cleaned collection of Computer Science research papers collected from the Crossref REST API. The dataset was constructed using a keyword-driven retrieval strategy targeting major Computer Science subfields.
DOI: 10.5281/zenodo.18375195
title: Forcing files to run the 1D Apecosm configuration

description: Forcing files to run Apecosm simulations in 1D

Based on the 1D simulations from NEMO-PISCES
DOI: 10.5281/zenodo.18375196
title: Forcing files to run the 1D Apecosm configuration

description: Forcing files to run Apecosm simulations in 1D

Based on the 1D simulations from NEMO-PISCES
DOI: 10.5281/zenodo.18377015
title: Genome-wide association study for circulating metabolites in 619,372 individuals

description: Genome-wide association study for circulating metabolites in 619,372 individuals

Preprint:  https://doi.org/10.1101/2024.10.15.24315557

meta_ALL - meta-analysis across Estonian Biobank and six genetic ancestry groups of the UK Biobank

meta_EUR - meta-analysis across Estonian Biobank and EUR genetic acestry group of the UK Biobank*_all_lead_varaints.tsv - all genome-wide significant lead variants detected for each of the 249 tested metabolites

*_independent_lead_variants.tsv - indepedendent lead variants that were in high LD with each other (r2 > 0.8).
DOI: 10.5281/zenodo.13937264
title: Genome-wide association study for circulating metabolites in 619,372 individuals

description: Genome-wide association study for circulating metabolites in 619,372 individuals

Preprint:  https://doi.org/10.1101/2024.10.15.24315557

meta_ALL - meta-analysis across Estonian Biobank and six genetic ancestry groups of the UK Biobank

meta_EUR - meta-analysis across Estonian Biobank and EUR genetic acestry group of the UK Biobank*_all_lead_varaints.tsv - all genome-wide significant lead variants detected for each of the 249 tested metabolites

*_independent_lead_variants.tsv - indepedendent lead variants that were in high LD with each other (r2 > 0.8).
DOI: 10.5281/zenodo.18324561
title: Complete Examination Dataset

description: This dataset contains the complete examination timetabling data used in the experimental evaluation of an optimisation-based model for the University Examination Timetabling Problem (UETP). The dataset includes information on examination courses, student enrolments, venues, and time slots. It is designed to support research on examination timetabling, optimisation modelling, and comparative evaluation of scheduling approaches.
DOI: 10.5281/zenodo.18324562
title: Complete Examination Dataset

description: This dataset contains the complete examination timetabling data used in the experimental evaluation of an optimisation-based model for the University Examination Timetabling Problem (UETP). The dataset includes information on examination courses, student enrolments, venues, and time slots. It is designed to support research on examination timetabling, optimisation modelling, and comparative evaluation of scheduling approaches.
DOI: 10.4211/hs.e9ce9cd322944c5fa22f0bf9e0ceae75
title: Field Observation of Seasonal Wave and Current Dynamics around a Hybrid Marsh-Rock Sill Living Shoreline

description: The combination of low-crested breakwaters, or sills, and marshes forms a common and effective coastal nature-based solution. However, uncertainty about their performance has limited their widespread adoption when compared to conventional structure-based coastal protection. In this study, we conducted nearly one year of field measurements to evaluate the functionality of a hybrid structure and vegetation feature, commonly referred to as a marsh-sill, in a relatively sheltered bay in rural Virginia. The rock sill’s crest was ~1 m high, ~1 m wide at the crest, with a 1:1.5 offshore slope, and the marsh was ~6 m wide in the direction normal to the shoreline. Wave and current sensors were deployed at multiple locations to measure hydrodynamic variables, particularly wave height and currents. Observations indicated that on average, the rock sill and marsh vegetation attenuate waves by 54% and 7%, respectively. Wave transmission through the rock sill was compared to existing empirical formulas that relate wave transmission to relative freeboard, relative structure crest width, and surf similarity, and new equations are proposed to describe the year-long field observations. Currents in the marsh behind the sill are 55% weaker than currents offshore of the rock sill. The marsh-sill was found to be effective in reducing waves and currents consistently throughout the deployment.
DOI: 10.13140/rg.2.2.25942.31046
title: Mohit Tiwari served as a Program Committee Member and Reviewer in the 6th Congress on Intelligent Systems (CIS 2025), organized by The Institution of Electronics and Telecommunication Engineers (IETE), Delhi Centre, and held at The Institution of Electronics and Telecommunication Engineers (IETE), Delhi Centre, during 06–07 September 2025.
DOI: 10.6084/m9.figshare.31150237
title: <b>Modeling trophic structure and ecosystem functioning of the small fish-dominated largest lake of Bangladesh</b>

description: Ecosystem modelling is becoming increasingly important, as it reveals how energy flows and species interactions shape ecosystem stability, resilience, and the sustainability of fisheries under natural and anthropogenic pressures. However, model-based ecosystem studies are scarce for the Kaptai Lake (KL), the largest artificial freshwater lake of Bangladesh. Therefore, a mass-balanced trophic model was built to illustrate the trophic structure and ecological features of KL. The model outputs indicated that Detritus along with Phytoplankton served as the primary sources of energy. The apex predator, Catfish (TL-3.364), occupied the top trophic niches, while the overabundant (B: 3.264 t/km²) Clupeid (TL-2.56) dominated the lower trophic level in the food web. The higher values of ecotrophic efficiency (&gt;0.5) for most of the groups indicate heavy fishing pressure. The ecosystem is Phytoplankton-based, where two core food chains that make up the majority of the food web are the Detritus (35.12%) and primary production (64.88%). The mixed trophic impact plot revealed a substantial positive effect of Detritus and Phytoplankton on majority of the fish groups, while Clupeids displayed negative effect on most of the fish groups, indicating a lack of major predators of this group. In the KL ecosystem, Catfish and Phytoplankton were the key predator and producer groups respectively. The network analysis indicates that the KL is a developing ecosystem with moderate system maturity, as evidenced by TPP/TR as well as TPP/TB ratios of 2.034 and 71.764, respectively, and a Finn Cycling Index (FCI) of 5.627%. The low connectance index (0.426) indicates that the food web is still linear rather than a web-like structure and thereby vulnerable to external influences. Besides these, the ever-increasing trend of Clupeid and declination of large fish populations indicates that the KL ecosystem may encounter severe consequences in the future, including "fishing down the food web" and irreversible regime shifts. Consequently, ecosystem-based management interventions have been proposed that will help to restore food web integrity, recover vulnerable species such as carps and apex predators, and ensure long-term sustainability of fisheries in this lake.
DOI: 10.6084/m9.figshare.31150237.v1
title: <b>Modeling trophic structure and ecosystem functioning of the small fish-dominated largest lake of Bangladesh</b>

description: Ecosystem modelling is becoming increasingly important, as it reveals how energy flows and species interactions shape ecosystem stability, resilience, and the sustainability of fisheries under natural and anthropogenic pressures. However, model-based ecosystem studies are scarce for the Kaptai Lake (KL), the largest artificial freshwater lake of Bangladesh. Therefore, a mass-balanced trophic model was built to illustrate the trophic structure and ecological features of KL. The model outputs indicated that Detritus along with Phytoplankton served as the primary sources of energy. The apex predator, Catfish (TL-3.364), occupied the top trophic niches, while the overabundant (B: 3.264 t/km²) Clupeid (TL-2.56) dominated the lower trophic level in the food web. The higher values of ecotrophic efficiency (&gt;0.5) for most of the groups indicate heavy fishing pressure. The ecosystem is Phytoplankton-based, where two core food chains that make up the majority of the food web are the Detritus (35.12%) and primary production (64.88%). The mixed trophic impact plot revealed a substantial positive effect of Detritus and Phytoplankton on majority of the fish groups, while Clupeids displayed negative effect on most of the fish groups, indicating a lack of major predators of this group. In the KL ecosystem, Catfish and Phytoplankton were the key predator and producer groups respectively. The network analysis indicates that the KL is a developing ecosystem with moderate system maturity, as evidenced by TPP/TR as well as TPP/TB ratios of 2.034 and 71.764, respectively, and a Finn Cycling Index (FCI) of 5.627%. The low connectance index (0.426) indicates that the food web is still linear rather than a web-like structure and thereby vulnerable to external influences. Besides these, the ever-increasing trend of Clupeid and declination of large fish populations indicates that the KL ecosystem may encounter severe consequences in the future, including "fishing down the food web" and irreversible regime shifts. Consequently, ecosystem-based management interventions have been proposed that will help to restore food web integrity, recover vulnerable species such as carps and apex predators, and ensure long-term sustainability of fisheries in this lake.
DOI: 10.5281/zenodo.18329901
title: ReESH_US-KSA: Kegonsa Solar Array

description: Regional Ecosystem Soil Hydraulics (ReESH) Project:

US-KSA: Kegonsa Solar Array

The ReESH Database includes soil characteristics of soil samples and corresponding soil water retention curves, which enable the conversion of soil water content to soil water potential.

Database Files: 1) Soil Characteristics:

"Site" -- Site Name (AmeriFlux Site Code)"Sample_ID" -- Unique Sample Identifier "Sampling_Date" -- Date of Sample Collection (YYYY-MM-DD)"Latitude" -- Site Latitude"Longitude" -- Site Longitude"Veg" -- International Geosphere-Biosphere Program (IGBP) "Depth_cm" -- Sample Collection Depth (cm)"Depth" -- Sample Collection Depth (cm)"CLAY" -- Percent Clay (%)"SILT" -- Percent Silt (%)"SAND" -- Percent Sand (%)"RootBiomass_g" -- Fine Root biomass (g per 250mL soil)"Pct_OM" -- Percent Organic Matter (%)"Bulk_Den_g_m3" -- Sample Bulk Density (g m^-3)"Med_KsSoil_m_s" -- Median Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"Min_KsSoil_m_s" -- Minimum Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"Max_KsSoil_m_s" -- Maximum Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"SD_KsSoil_m_s" -- Standard Deviation in Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"KS_Soil_Flag" -- QAQC flags for Saturated Hydraulic Conductivity measurements (0==good; 1==suspect and use with caution)

2) Soil Water Retention Curves:"Site" -- Site Name (AmeriFlux Site Code)"Sample_ID" -- Unique Sample Identifier "Plot" -- Site Personnel Defined Pit Identifier "Depth_cm" -- Sample Collection Depth (cm)"MPa_Abs" -- Sample Water Potential (-MPa)"Vol_Water" -- Sample Water Content (%)"Hypropfilter" -- Instrument Code (1==WP4C; 2==HyProp)"Sampling_Date" -- Date of Sample Collection (YYYY-MM-DD)

"Latitude" -- Site Latitude"Longitude" -- Site Longitude"Veg" -- International Geosphere-Biosphere Program (IGBP) "Bulk_Den_g_m3" -- Sample Bulk Density (g m^-3)
DOI: 10.5281/zenodo.18329902
title: ReESH_US-KSA: Kegonsa Solar Array

description: Regional Ecosystem Soil Hydraulics (ReESH) Project:

US-KSA: Kegonsa Solar Array

The ReESH Database includes soil characteristics of soil samples and corresponding soil water retention curves, which enable the conversion of soil water content to soil water potential.

Database Files: 1) Soil Characteristics:

"Site" -- Site Name (AmeriFlux Site Code)"Sample_ID" -- Unique Sample Identifier "Sampling_Date" -- Date of Sample Collection (YYYY-MM-DD)"Latitude" -- Site Latitude"Longitude" -- Site Longitude"Veg" -- International Geosphere-Biosphere Program (IGBP) "Depth_cm" -- Sample Collection Depth (cm)"Depth" -- Sample Collection Depth (cm)"CLAY" -- Percent Clay (%)"SILT" -- Percent Silt (%)"SAND" -- Percent Sand (%)"RootBiomass_g" -- Fine Root biomass (g per 250mL soil)"Pct_OM" -- Percent Organic Matter (%)"Bulk_Den_g_m3" -- Sample Bulk Density (g m^-3)"Med_KsSoil_m_s" -- Median Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"Min_KsSoil_m_s" -- Minimum Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"Max_KsSoil_m_s" -- Maximum Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"SD_KsSoil_m_s" -- Standard Deviation in Saturated Hydraulic Conductivity (m s^-1) -minimum three replicates"KS_Soil_Flag" -- QAQC flags for Saturated Hydraulic Conductivity measurements (0==good; 1==suspect and use with caution)

2) Soil Water Retention Curves:"Site" -- Site Name (AmeriFlux Site Code)"Sample_ID" -- Unique Sample Identifier "Plot" -- Site Personnel Defined Pit Identifier "Depth_cm" -- Sample Collection Depth (cm)"MPa_Abs" -- Sample Water Potential (-MPa)"Vol_Water" -- Sample Water Content (%)"Hypropfilter" -- Instrument Code (1==WP4C; 2==HyProp)"Sampling_Date" -- Date of Sample Collection (YYYY-MM-DD)

"Latitude" -- Site Latitude"Longitude" -- Site Longitude"Veg" -- International Geosphere-Biosphere Program (IGBP) "Bulk_Den_g_m3" -- Sample Bulk Density (g m^-3)
DOI: 10.5281/zenodo.10804898
title: Bursts of rapid diversification, multiple dispersals out of southern Africa, and two origins of dioecy punctuate the evolutionary history of Asparagus

description: Dataset and result files from phylogenomic analysis and ancestral biogeography estimation across the genus Asparagus using the Asparagaceae1726 bait set. 

Contents of this version replaces Quartet_Sampling.zip in the previous version.

Contents:



Quartet_Sampling_FINAL.zip = input dataset and final results from Quartet Sampling (i.e., 1000 quartet replicates sampled per node)
DOI: 10.5281/zenodo.12626884
title: Bursts of rapid diversification, multiple dispersals out of southern Africa, and two origins of dioecy punctuate the evolutionary history of Asparagus

description: Dataset and result files from phylogenomic analysis and ancestral biogeography estimation across the genus Asparagus using the Asparagaceae1726 bait set. 

Contents of this version replaces Quartet_Sampling.zip in the previous version.

Contents:



Quartet_Sampling_FINAL.zip = input dataset and final results from Quartet Sampling (i.e., 1000 quartet replicates sampled per node)
DOI: 10.4121/6415cb8a-713e-4f3d-aee4-d83b672d052c
title: Data accompanying the publication: Utilizing focused field as a probe for shape determination of subwavelength structures via coherent Fourier scatterometry

description: Authors (publication): Anubhav Paul, Robin Wever, Sarika Soman, Silvania F. Pereira<br>This dataset contains the raw and processed data, together with analysis scripts/helper functions, supporting the results reported in the publication “Utilizing focused field as a probe for shape determination of subwavelength structures via coherent Fourier scatterometry”. It includes datasets from coherent Fourier scatterometry (CFS) far-field signatures acquired under tightly focused illumination (λ = 633 nm) for nanopillars with different geometries (cylindrical, triangular, square, and rectangular) and multiple orientations, as well as corresponding 3D FDTD simulation outputs used for direct comparison with experiments. The dataset includes processed results derived from these far-field measurements/simulations, such as the rotation-dependent correlation metric used to identify shape-specific periodic signatures, and parameter-sweep data used in the paper’s limitation analyses (e.g., lateral dimension, height dependence, and robustness to shape distortions such as edge roundness). The dataset is organized to enable reproducibility of the reported figures and can be reused for related research on subwavelength shape characterization and optical metrology using focused-field scatterometry.
DOI: 10.4121/6415cb8a-713e-4f3d-aee4-d83b672d052c.v1
title: Data accompanying the publication: Utilizing focused field as a probe for shape determination of subwavelength structures via coherent Fourier scatterometry

description: Authors (publication): Anubhav Paul, Robin Wever, Sarika Soman, Silvania F. Pereira<br>This dataset contains the raw and processed data, together with analysis scripts/helper functions, supporting the results reported in the publication “Utilizing focused field as a probe for shape determination of subwavelength structures via coherent Fourier scatterometry”. It includes datasets from coherent Fourier scatterometry (CFS) far-field signatures acquired under tightly focused illumination (λ = 633 nm) for nanopillars with different geometries (cylindrical, triangular, square, and rectangular) and multiple orientations, as well as corresponding 3D FDTD simulation outputs used for direct comparison with experiments. The dataset includes processed results derived from these far-field measurements/simulations, such as the rotation-dependent correlation metric used to identify shape-specific periodic signatures, and parameter-sweep data used in the paper’s limitation analyses (e.g., lateral dimension, height dependence, and robustness to shape distortions such as edge roundness). The dataset is organized to enable reproducibility of the reported figures and can be reused for related research on subwavelength shape characterization and optical metrology using focused-field scatterometry.
DOI: 10.5517/ccdc.csd.cc12g34s
title: CCDC 996654: Experimental Crystal Structure Determination

description: Related Article: R. Jamuna, T. Jayanalina, Ehab El Sayed Massoud, K. SenthilKannan|2025|J.Mater Sci: Mater Electron.|36|177|doi:10.1007/s10854-024-14182-z
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dgxzs
title: CCDC 2218886: Experimental Crystal Structure Determination

description: Related Article: Stéphane Golling, Tianhong Yan, Valérie Mazan, Frédéric R. Leroux, Ilaria Ciofini, Morgan Donnard|2024|Adv.Synth.Catal.|366|2324|doi:10.1002/adsc.202400293
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fl4mt
title: CCDC 2251766: Experimental Crystal Structure Determination

description: Related Article: Stéphane Golling, Tianhong Yan, Valérie Mazan, Frédéric R. Leroux, Ilaria Ciofini, Morgan Donnard|2024|Adv.Synth.Catal.|366|2324|doi:10.1002/adsc.202400293
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fzcc5
title: CCDC 2263507: Experimental Crystal Structure Determination

description: Related Article: Anarbay U.Babekov, Kholida I. Khasanova, Komila A. Eshbakova, Kambarali K. Turgunov, Bakhodir Tashkhodzhaev|2024|Chem. Nat. Compd.|60|177|doi:10.1007/s10600-024-04282-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fzcd6
title: CCDC 2263508: Experimental Crystal Structure Determination

description: Related Article: Anarbay U.Babekov, Kholida I. Khasanova, Komila A. Eshbakova, Kambarali K. Turgunov, Bakhodir Tashkhodzhaev|2024|Chem. Nat. Compd.|60|177|doi:10.1007/s10600-024-04282-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hj237
title: CCDC 2309348: Experimental Crystal Structure Determination

description: Related Article: Florian Audet, Morgan Donnard, Armen Panossian, Philipp M. Holstein, David Bernier, Sergii Pazenok, Frédéric R. Leroux|2024|Adv.Synth.Catal.|366|3466|doi:10.1002/adsc.202400401
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.