cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/inscriptifact-ouc110604025
title: Persepolis Fortification Aramaic Text 507, PFAT 507

description: [Text Description:] Administrative text with seals PFATS 0006 ❧ [Text or Publication Number Note:] PFAT 507, Bowman 507 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0006 reverse, flat edge.
DOI: 10.25549/inscriptifact-ouc110604003
title: Persepolis Fortification Aramaic Text 506, PFAT 506

description: [Text Description:] Administrative text with seals PFATS 0466s, PFATS 0467 ❧ [Text or Publication Number Note:] PFAT 506, Bowman 506 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impressions PFATS 0466s obverse; PFATS 0467 flat edge. ❧ [Physical Object Note:] Damage on round edge.
DOI: 10.11582/2024.00061
title: FHIST_f09_f09_ID3_* simulations

description: Model Version: CAM6-nor (atmosphere model of NorESM2);
Years: 1979-2014;
Ensemble Size: 20 members;
Time Frequencies Saved: Monthly, Daily;
Compsets: FHIST;
Boundary conditions: Historical daily SIC and SST outside of the tropics from HadISST.2.2.0.0, daily climatological (1979-2014 mean) SST in the tropical central-eastern Pacific (20°S-20°N, 160°E-70°W), 25°S–20°S and 20°N–25°N as the buffer zones;
DOI: 10.25549/inscriptifact-ouc110604023
title: Persepolis Fortification Aramaic Text 507, PFAT 507

description: [Text Description:] Administrative text with seals PFATS 0006 ❧ [Text or Publication Number Note:] PFAT 507, Bowman 507 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0006 reverse, flat edge.
DOI: 10.3535/57l-wb3-t10
title: Eumachia haematocarpa (Standl.) C.M.Taylor & Razafim.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/zl0-0n8-ty8
title: Lecanora subcarnea (Lilj.) Ach.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.25549/inscriptifact-ouc110603988
title: Persepolis Fortification Aramaic Text 506, PFAT 506

description: [Text Description:] Administrative text with seals PFATS 0466s, PFATS 0467 ❧ [Text or Publication Number Note:] PFAT 506, Bowman 506 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impressions PFATS 0466s obverse; PFATS 0467 flat edge. ❧ [Physical Object Note:] Damage on round edge.
DOI: 10.3535/h4f-y4b-dv6
title: Drymaria cordata (L.) Willd. ex Schult.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/mpf-9ny-33s
title: Palicourea hoffmannseggiana (Willd. ex Schult.) Borhidi

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.25549/inscriptifact-ouc110602684
title: Persepolis Fortification Aramaic Text 465, PFAT 465

description: [Text Description:] Administrative text with seals PFATS 0078 ❧ [Text or Publication Number Note:] PFAT 465, Bowman 465 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0078 on obverse, reverse. ❧ [Physical Object Note:] Damage on flat edge.
DOI: 10.3535/0h2-fhe-n2m
title: Tristagma berteroi (Kunth) S.C.Arroyo & Sassone

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/9q5-bdz-jqc
title: Carex × kohtsii K.Richt.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.11582/2024.00077
title: NorESM2-LM SSP5-3.4 simulation with additional Ocean Alklinity Enhancement at 0.135 Pmol TA yr-1

description: NorESM2-LM simulation results of an emission driven SSP5-3.4 simulation with additional Ocean Alkalinity Enhancement (OAE) at a rate of 0.135 Tmol TA per year. OAE is applied homogeneously over the surface ocean between 60S and 70N and ramped up from zero to 0.135 Tmol TA/year between 2025 and 2035.
DOI: 10.25549/inscriptifact-ouc110602565
title: Persepolis Fortification Aramaic Text 460, PFAT 460

description: [Text Description:] Administrative text with seals PFATS 0432s, PFATS 0063s, PFATS 0010s ❧ [Text or Publication Number Note:] PFAT 460, Bowman 460 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impressions PFATS 0432s on upper edge; PFATS 0063s on bottom edge; PFATS 0010s on flat edge.
DOI: 10.3535/6fx-qz0-zsq
title: Celtis pacifica Planch.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.25549/inscriptifact-ouc110602679
title: Persepolis Fortification Aramaic Text 465, PFAT 465

description: [Text Description:] Administrative text with seals PFATS 0078 ❧ [Text or Publication Number Note:] PFAT 465, Bowman 465 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0078 on obverse, reverse. ❧ [Physical Object Note:] Damage on flat edge.
DOI: 10.3535/4as-rey-c60
title: Guettarda L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/pf9-1ey-j8y
title: Bromus japonicus Houtt.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.25549/inscriptifact-ouc110602563
title: Persepolis Fortification Aramaic Text 461, PFAT 461

description: [Text Description:] Administrative text with seals PFATS 0433, illegible seal ❧ [Text or Publication Number Note:] PFAT 461, Bowman 461 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0433 on reverse. Illegible seal impression on upper edge.
DOI: 10.3535/6ff-cdj-9gh
title: Polypodium subpetiolatum Hook.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/v2x-81p-hf7
title: Bromus kalmii A.Gray

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.25549/inscriptifact-ouc110602673
title: Persepolis Fortification Aramaic Text 465, PFAT 465

description: [Text Description:] Administrative text with seals PFATS 0078 ❧ [Text or Publication Number Note:] PFAT 465, Bowman 465 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0078 on obverse, reverse. ❧ [Physical Object Note:] Damage on flat edge.
DOI: 10.3535/4n1-2s7-q8w
title: Psychotria neillii C.W.Ham. & Dwyer

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.34740/kaggle/dsv/11504967
title: llms.txt
DOI: 10.15468/dl.ed8t7b
title: Occurrence Download

description: A dataset containing 244703 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Depth 200.0-1000.0m",
 "TaxonKey is Decapoda"
 ]
}

 The dataset includes 244703 records from 252 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004515-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14466/cefasdatahub.119
title: SmartBuoy Marine Observational Network - UK Waters Phytoplankton Data 2018-2019

description: This dataset consists of analysed phytoplankton data from the years 2018-2019 inclusive collected in UK waters from the SmartBuoy moorings at Dowsing, WestGabbard2, Warp and Liverpool Bay using WMS and EDU automated water samplers. SmartBuoys consist of a 4 meter tall stainless steel frame with a fibreglass toroid for buoyancy. Instruments are attached at a nominal 1 meter depth to the frame. The water samplers collect into pre-spiked bags containing acidified Lugols Iodine on a pre-determined cycle over the course of a deployment. As of the beginning of this data set water samples have been taken using a CTD rosette on mooring turnarounds in case of buoy failure, reducing the issue of data gaps  Following recovery these samples were analysed for a full community of phytoplankton species using the Utermohl method on high-power inverted microscopes. Phytoplankton cell counts are abundance values reported in Cells per Litre. This dataset is a continuation of the 'SmartBuoy Marine Observational Network - UK Waters Phytoplankon Data 2001-2017 (Milligan and Bear (2019). SmartBuoy Marine Observational Network - Phytoplankton Data 2001-2017. Cefas, UK. V2. doi: https://doi.org/10.14466/CefasDataHub.58). These deployments form part of the National Marine Monitoring Programme (NMMP) funded by the UK Government's Department for Environment, Food and Rural Affairs (Defra). SmartBuoy phytoplankton data is primarily used for eutrophication monitoring and feeds into OSPAR and MSFD assessments.  Buoys have also been deployed as part of short term (up to 3 years) research contracts. Phytoplankton samples have been collected using SmartBuoys since April 2001 at a variety of locations in the North Sea, Irish Sea and Celtic Sea. Blanks in the dataset constitute information which is unavailable and should be treated as missing. This dataset is now Version 2, which includes Size Class information per taxa and a .txt file to provide detailed descriptions for each column.
DOI: 10.15468/dl.byjxfu
title: Occurrence Download

description: A dataset containing 2122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna siamea",
 "Country is Benin",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2122 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019805-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qz86n6
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna siamea",
 "Country is Botswana",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019806-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25444/nhlbi.29316011
title: Data for "<b>Spindle checkpoint can secure additional cheating time for selfish expanded centromeres</b>".

description: Microscopy images in the Figures and Supplemental Figures in Walton et al "<b>Spindle checkpoint can secure additional cheating time for selfish expanded centromeres</b>".<b>Summary:</b>Expanded centromeric satellite repeats can violate Mendel’s Law of Segregation by preferentially segregating to the egg. In mice, these selfish centromeres enrich microtubule-destabilizers at pericentromeres to detach from the spindle and flip towards the egg side of the meiotic spindle, thereby achieving preferential segregation. However, despite consistent enrichment of destabilizers upon centromere expansion, such enrichment alone is insufficient to drive preferential retention of expanded centromeres, suggesting a missing component in understanding their non-Mendelian segregation. Here we propose that prolonged spindle checkpoint activation is crucial for expanded centromeres to cheat the segregation process by providing sufficient time for them to flip towards the egg side. By experimentally manipulating kinetochore size in a species-specific manner, we found that assembling larger kinetochores triggers robust spindle checkpoint activation, leading to anaphase delay and preferential retention of expanded centromeres in the egg. Comparisons across multiple hybrid mouse models revealed that centromeric satellite asymmetry does not consistently lead to kinetochore asymmetry and anaphase delay, explaining why satellite asymmetry does not always result in preferential retention of larger centromeres. Altogether, this work highlights the significance of checkpoint activation in exploiting the inherent asymmetry in female meiosis and the distinct responses of kinetochore proteins and microtubule-destabilizers to centromere expansion.
DOI: 10.25444/nhlbi.29316011.v3
title: Data for "<b>Spindle checkpoint can secure additional cheating time for selfish expanded centromeres</b>".

description: Microscopy images in the Figures and Supplemental Figures in Walton et al "<b>Spindle checkpoint can secure additional cheating time for selfish expanded centromeres</b>".<b>Summary:</b>Expanded centromeric satellite repeats can violate Mendel’s Law of Segregation by preferentially segregating to the egg. In mice, these selfish centromeres enrich microtubule-destabilizers at pericentromeres to detach from the spindle and flip towards the egg side of the meiotic spindle, thereby achieving preferential segregation. However, despite consistent enrichment of destabilizers upon centromere expansion, such enrichment alone is insufficient to drive preferential retention of expanded centromeres, suggesting a missing component in understanding their non-Mendelian segregation. Here we propose that prolonged spindle checkpoint activation is crucial for expanded centromeres to cheat the segregation process by providing sufficient time for them to flip towards the egg side. By experimentally manipulating kinetochore size in a species-specific manner, we found that assembling larger kinetochores triggers robust spindle checkpoint activation, leading to anaphase delay and preferential retention of expanded centromeres in the egg. Comparisons across multiple hybrid mouse models revealed that centromeric satellite asymmetry does not consistently lead to kinetochore asymmetry and anaphase delay, explaining why satellite asymmetry does not always result in preferential retention of larger centromeres. Altogether, this work highlights the significance of checkpoint activation in exploiting the inherent asymmetry in female meiosis and the distinct responses of kinetochore proteins and microtubule-destabilizers to centromere expansion.
DOI: 10.25444/nhlbi.29316011.v2
title: Data for "<b>Spindle checkpoint can secure additional cheating time for selfish expanded centromeres</b>".

description: Microscopy images analyzed in the Figures and Supplemental Figures in Walton et al "<b>Spindle checkpoint can secure additional cheating time for selfish expanded centromeres</b>".<b>Summary:</b>Expanded centromeric satellite repeats can violate Mendel’s Law of Segregation by preferentially segregating to the egg. In mice, these selfish centromeres enrich microtubule-destabilizers at pericentromeres to detach from the spindle and flip towards the egg side of the meiotic spindle, thereby achieving preferential segregation. However, despite consistent enrichment of destabilizers upon centromere expansion, such enrichment alone is insufficient to drive preferential retention of expanded centromeres, suggesting a missing component in understanding their non-Mendelian segregation. Here we propose that prolonged spindle checkpoint activation is crucial for expanded centromeres to cheat the segregation process by providing sufficient time for them to flip towards the egg side. By experimentally manipulating kinetochore size in a species-specific manner, we found that assembling larger kinetochores triggers robust spindle checkpoint activation, leading to anaphase delay and preferential retention of expanded centromeres in the egg. Comparisons across multiple hybrid mouse models revealed that centromeric satellite asymmetry does not consistently lead to kinetochore asymmetry and anaphase delay, explaining why satellite asymmetry does not always result in preferential retention of larger centromeres. Altogether, this work highlights the significance of checkpoint activation in exploiting the inherent asymmetry in female meiosis and the distinct responses of kinetochore proteins and microtubule-destabilizers to centromere expansion.
DOI: 10.15468/dl.mzh3fp
title: Occurrence Download

description: A dataset containing 301 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senna siamea",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 301 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019807-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a3e9vw
title: Occurrence Download

description: A dataset containing 181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quasipaa exilispinosa",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 181 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019810-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16752887
title: A systematic map and comprehensive database of animal organ sizes

description: The relationship between individual organ size and overall body size in animals is a fundamental biological phenomenon that spans multiple disciplines and has been studied for decades. However, a comprehensive synthesis of the sources of variation in organ-specific scaling remains lacking, even among mammals, the most extensively studied vertebrate group. To address this, we developed a systematic map and compiled a large database of paired organ and body size measurements. This database includes over 10,000 records from 366 species across eight major vertebrate and invertebrate classes: Aves, Mammalia, Actinopterygii, Reptilia, Amphibia, Chondrichthyes, Insecta, and Cephalopoda. Our database provides size estimates for 53 organ types, categorised into 10 physiological systems, with most data derived from digestive, circulatory and excretory systems. In addition, we include extensive metadata to contextualise the original studies, which highlights gaps—such as the season of animal collection and life stage, both of which were among the least frequently reported. We anticipate this comprehensive and reproducible resource will offer a robust foundation for improving the parameterisation and cross-species applicability of simulation models based on physiological and kinetic principles, thereby advancing our understanding of organ size scaling across diverse taxa.
DOI: 10.5281/zenodo.16752888
title: A systematic map and comprehensive database of animal organ sizes

description: The relationship between individual organ size and overall body size in animals is a fundamental biological phenomenon that spans multiple disciplines and has been studied for decades. However, a comprehensive synthesis of the sources of variation in organ-specific scaling remains lacking, even among mammals, the most extensively studied vertebrate group. To address this, we developed a systematic map and compiled a large database of paired organ and body size measurements. This database includes over 10,000 records from 366 species across eight major vertebrate and invertebrate classes: Aves, Mammalia, Actinopterygii, Reptilia, Amphibia, Chondrichthyes, Insecta, and Cephalopoda. Our database provides size estimates for 53 organ types, categorised into 10 physiological systems, with most data derived from digestive, circulatory and excretory systems. In addition, we include extensive metadata to contextualise the original studies, which highlights gaps—such as the season of animal collection and life stage, both of which were among the least frequently reported. We anticipate this comprehensive and reproducible resource will offer a robust foundation for improving the parameterisation and cross-species applicability of simulation models based on physiological and kinetic principles, thereby advancing our understanding of organ size scaling across diverse taxa.
DOI: 10.15468/dl.gya6c7
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Paraguay",
 "TaxonKey is Philodryas agassizii"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019808-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16752870
title: PhyloRNA: A Database of RNA Secondary Structures with Associated Phylogeny (DOI Reference)

description: This entry provides a DOI for PhyloRNA, a curated meta-database of RNA secondary structures linked with phylogenetic information.

PhyloRNA contains a collection of known RNA secondary structures, either extracted from public databases or derived from 3D structural data. Each structure is annotated with multiple features - such as pseudoknot presence, base-pairing statistics, and structural abstractions - and is associated with taxonomic data from five curated phylogenies.

The database is intended to support evolutionary analyses of RNA structure across organisms, offering a platform where structural and phylogenetic information are integrated.

Access PhyloRNA: https://bdslab.unicam.it/phylorna/

This DOI can be used to cite the PhyloRNA database in publications. It is associated with the manuscript:

Quadrini, M. & Tesei, L. PhyloRNA: A Database of RNA Secondary Structures with Associated Phylogeny, submitted (2025).

We plan to update this entry as the database evolves and as the manuscript progresses through peer review.

Funding

This work was supported by the European Union - NextGenerationEU - National Recovery and Resilience Plan (NRRP), Mission 4, Component 2, Investment 1.1, under the PRIN 2022 PNRR call (Min. Decree No. 1409, dated September 14, 2022), project: P2022FFEWN RNA secondary structures and their relationship with function: application to non-coding RNAs (RNA2Fun), CUP: J53D23014960001.