cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11071793
title: MZ_0011_002_Neophyllobius_electrus_40x_dorsalparttwo

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11070140
title: MZ_0010_002_Neophyllobius_electrus_40x_dorsalpartone

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11071793.v1
title: MZ_0011_002_Neophyllobius_electrus_40x_dorsalparttwo

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11058764
title: The Severance Validation Data set

description: - SeveranceA_Thumbnails.zipSeverance Dataset A (10,426 cases)thumbnail images<br><br>- SeveranceA.xls Severance Dataset A (10,426 cases)<br>metadata (Diagnosis, Age, Sex, ClinicalDx, ClinicalDx Code, Biopsy site, Biopsy Site Code)
DOI: 10.6084/m9.figshare.11059379
title: Data-collected papers.xlsx

description: This dataset consisted of 70 empirical research.
DOI: 10.6084/m9.figshare.11070140.v1
title: MZ_0010_002_Neophyllobius_electrus_40x_dorsalpartone

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11050685
title: Much more than a clasp: Evolutionary pattern of amplexus diversity in anurans

description: Amplexus data for 686 Anurans species
DOI: 10.6084/m9.figshare.11050685.v1
title: Much more than a clasp: Evolutionary pattern of amplexus diversity in anurans

description: Amplexus data for 686 Anurans species
DOI: 10.6084/m9.figshare.11059379.v1
title: Data-collected papers.xlsx

description: This dataset consisted of 70 empirical research that studies design support tools for service and UX designers.
DOI: 10.6084/m9.figshare.11058764.v1
title: The Severance Validation Data set

description: We provided thumbnail images and metadata of the Severance dataset.<br>The natural language of clinical diagnosis and biopsy-site was translated to code by aliasing sentence and confirming the code manually.
DOI: 10.6084/m9.figshare.11039708
title: Reviewed datasets of toxicoproteomic data in FASTA file format including ion channel impairing toxins and dermonecrotic toxins.

description: Reviewed datasets of toxicoproteomic data in FASTA file format including ion channel impairing toxins and dermonecrotic toxins.
DOI: 10.6084/m9.figshare.11058764.v2
title: The Severance Validation Data set

description: We provided thumbnail images and metadata of the Severance dataset A (10,426 patients).<br>- Severance_Thumbnails.zip - thumnail images- Severance.xls - metadata<br><br>The clinical diagnosis and biopsy-sites were stored in natural language, and we translated them to codes. A python script was written to convert the natural language to codes by defining aliases. And then, we confirmed the codes manually two times.
DOI: 10.6084/m9.figshare.11039708.v2
title: Reviewed datasets of toxicoproteomic data in FASTA file format including ion channel impairing toxins and dermonecrotic toxins.

description: Reviewed datasets of toxicoproteomic data in FASTA file format including ion channel impairing toxins and dermonecrotic toxins.
DOI: 10.6084/m9.figshare.11038790
title: Data_RT_TRSP

description: The data for studying the circulation dynamics and residence time of a lagoon in the Red Sea coast.
DOI: 10.6084/m9.figshare.11038790.v1
title: Data_RT_TRSP

description: The data for studying the circulation dynamics and residence time of a lagoon in the Red Sea coast.
DOI: 10.6084/m9.figshare.11058764.v3
title: The Severance Validation Data set

description: - Severance_Thumbnails.zip - Severance Dataset A (10,426 patients); thumbnail images<br>- Severance.xls - metadata (Diagnosis, Age, Sex, ClinicalDx, ClinicalDx Code, Biopsy site, Biopsy Site Code) of the Severance Dataset A<br>- SeveranceC_png.zip - Severance Dataset C; original resolution images; Filename Format = [reader test No.]_[sub No.]_[Diagnosis].png<br>- reader_test_pdf.zip - a total of 44 pdf documents which was used for the reader test. The answer can be found in the filename of "SeveranceC_png.zip"
DOI: 10.6084/m9.figshare.11036873
title: Frequency of CD 56 protein expression in thyroid carcinomas and their impact on neoplasm migration capability among Sudanese patients: across sectional study

description: This is a descriptive retrospective hospital based study, was conducted in Alzaeim Alazhari University of at histopathology laboratory. Two Hundred and six formalin fixed paraffin embedded blocks previously diagnosed as thyroid tumors were collected for this study, they included hundred and two with malignant thyroid tumors and hundred and four as benign thyroid tumors. Data collected from record demographic characterization and histopathological diagnosis. Archived blocks known diagnosed as thyroid tumor data and blocks collected from seven different hospitals in Khartoum state in (from 2012 to 2016 year period) . from National health Laboratory, Maternity, Military, The National Ribbat, Khartoum North, Ibrahim Malek, and Omdurman Teaching Hospitals, Sudan. It was performed in tissue micro array slides labeled (A 1-A 15) to measure the protein expression of CD 56 protein in different sub types of thyroid tumor. Two Hundred and six formalin fixed paraffin embedded blocks previously diagnosed as thyroid tumors were collected for this study, <b>.</b>The Ministry of health of Khartoum state approved the study and waived informed consent from patient since there was anonymization of patients' identity and only laboratory numbers were used
DOI: 10.6084/m9.figshare.11058764.v4
title: The Severance Validation Data set

description: - Severance_Thumbnails.zip - Severance Dataset A (10,426 patients); thumbnail images<br><br>- Severance.xls - metadata (Diagnosis, Age, Sex, ClinicalDx, ClinicalDx Code, Biopsy site, Biopsy Site Code) of the Severance Dataset A
DOI: 10.6084/m9.figshare.11036873.v1
title: Frequency of CD 56 protein expression in thyroid carcinomas and their impact on neoplasm migration capability among Sudanese patients: across sectional study

description: This is a descriptive retrospective hospital based study, was conducted in Alzaeim Alazhari University of at histopathology laboratory. Two Hundred and six formalin fixed paraffin embedded blocks previously diagnosed as thyroid tumors were collected for this study, they included hundred and two with malignant thyroid tumors and hundred and four as benign thyroid tumors. Data collected from record demographic characterization and histopathological diagnosis. Archived blocks known diagnosed as thyroid tumor data and blocks collected from seven different hospitals in Khartoum state in (from 2012 to 2016 year period) . from National health Laboratory, Maternity, Military, The National Ribbat, Khartoum North, Ibrahim Malek, and Omdurman Teaching Hospitals, Sudan. It was performed in tissue micro array slides labeled (A 1-A 15) to measure the protein expression of CD 56 protein in different sub types of thyroid tumor. Two Hundred and six formalin fixed paraffin embedded blocks previously diagnosed as thyroid tumors were collected for this study, <b>.</b>The Ministry of health of Khartoum state approved the study and waived informed consent from patient since there was anonymization of patients' identity and only laboratory numbers were used
DOI: 10.6084/m9.figshare.11027960
title: LattanzioMcCannManion_Data.xlsx

description: Raw data for 'Geographic Variation in the Ecomorphology and Thermal Ecology of a Widespread Lizard' by Matthew S. Lattanzio, Madison J. McCann, and Maleah J. Manion<br>
DOI: 10.6084/m9.figshare.11025179
title: Audiological and psychological profiles of children with tinnitus

description: <b>Purpose:</b> The objective of the study was to gauge the audiological and psychological profiles of children with tinnitus. <b>Method:</b> We recruited 25 paediatric patients (aged less than 18 years) reporting tinnitus who voluntarily came to our clinic in 2017. The children and their parents underwent a structured interview as part of a consultation in the Tinnitus Department. Otolaryngological examination and tonal and impedance audiometry were performed. Children filled in a Visual Analogue Scale (VAS) on loudness, annoyance, and how well they were coping with their tinnitus. Additionally, we used the Revised Children's Anxiety and Depression Scale and the Revised Children Anxiety and Depression Scale (Parent Version) to look for possible depressive and anxiety disorders, and the EAS Temperament Survey to assess the temperament of the children. <b>Results:</b> The group consisted of 25 children (16 girls and 9 boys) aged from 6 to 16 years. Most of the children had normal hearing. Tinnitus had a significant daily impact on sleeping, studying, and leisure. The VAS scale results revealed that younger children, 6 to 10 years old, found tinnitus more troublesome than older children (11 to 16 years). No child with tinnitus showed any severe symptoms of depression or anxiety. All showed average levels of temperamental traits, close to normative values. <b>Conclusion:</b> When diagnosing tinnitus in children it is important to recognize that tinnitus affects children differently to adults. Whether children with tinnitus require specific intervention remains a difficult question to answer. Hence, there is an urgent need to devise a questionnaire that can assess the impact of tinnitus on children’s quality of life.
DOI: 10.6084/m9.figshare.11027960.v1
title: LattanzioMcCannManion_Data.xlsx

description: Raw data for 'Geographic Variation in the Ecomorphology and Thermal Ecology of a Widespread Lizard' by Matthew S. Lattanzio, Madison J. McCann, and Maleah J. Manion<br>
DOI: 10.6084/m9.figshare.11013335
title: Production, purification and kinetic characterization of glutaminase free anti-leukemic L-asparaginase with low endotoxin level from novel soil isolate

description: Anti-leukemic enzyme L-asparaginase despite having significant applicability in medicine, holds side effects attributed to glutaminase activity and endotoxin content. Glutaminase activity proves to be toxic to non-tumor cells as glutamine is an essential amino acid. Endotoxin illicit the production of vasoactive amines and induce septic shock. Hence there is a need for glutaminase free L-asparaginase with minimum endotoxin level. The report aims at the development of a downstream process for purification of glutaminase free L-asparaginase and subsequent endotoxin removal. Producing bacteria were isolated from various soil samples and screened initially for asparaginase and glutaminase activity. The glutaminase free L-asparaginase producing bacteria were identified as <i>Bacillus altitudinis</i>. Production of L-asparaginase was optimized. The optimum medium comprised of comprising Lactose (1.5 g/L), NaCl (1.2 g/L), Yeast extract (5 g/L), L-asparagine (20 g/L) with pH 7.0 and incubation time of 18 h. Kinetic parameters Km and Vmax were computed to be 9.09x10<sup>−2</sup>M and 0.09 M/S. L-asparaginase Purification was achieved with a specific activity of 800 U/mg of enzyme. Molecular weight of the purified L-asparaginase was determined to be around 35 KDa using SDS-PAGE. The developed process also brought down the endotoxin content below the FDA recommended level. The endotoxin content of the purified enzyme was determined to be 0.015EU/mL.
DOI: 10.6084/m9.figshare.11025179.v1
title: Audiological and psychological profiles of children with tinnitus

description: <b>Purpose:</b> The objective of the study was to gauge the audiological and psychological profiles of children with tinnitus. <b>Method:</b> We recruited 25 paediatric patients (aged less than 18 years) reporting tinnitus who voluntarily came to our clinic in 2017. The children and their parents underwent a structured interview as part of a consultation in the Tinnitus Department. Otolaryngological examination and tonal and impedance audiometry were performed. Children filled in a Visual Analogue Scale (VAS) on loudness, annoyance, and how well they were coping with their tinnitus. Additionally, we used the Revised Children's Anxiety and Depression Scale and the Revised Children Anxiety and Depression Scale (Parent Version) to look for possible depressive and anxiety disorders, and the EAS Temperament Survey to assess the temperament of the children. <b>Results:</b> The group consisted of 25 children (16 girls and 9 boys) aged from 6 to 16 years. Most of the children had normal hearing. Tinnitus had a significant daily impact on sleeping, studying, and leisure. The VAS scale results revealed that younger children, 6 to 10 years old, found tinnitus more troublesome than older children (11 to 16 years). No child with tinnitus showed any severe symptoms of depression or anxiety. All showed average levels of temperamental traits, close to normative values. <b>Conclusion:</b> When diagnosing tinnitus in children it is important to recognize that tinnitus affects children differently to adults. Whether children with tinnitus require specific intervention remains a difficult question to answer. Hence, there is an urgent need to devise a questionnaire that can assess the impact of tinnitus on children’s quality of life.
DOI: 10.6084/m9.figshare.11010392
title: Summary of interview findings

description: The dataset provides sample statements from students.
DOI: 10.6084/m9.figshare.11013335.v1
title: Production, purification and kinetic characterization of glutaminase free anti-leukemic L-asparaginase with low endotoxin level from novel soil isolate

description: Anti-leukemic enzyme L-asparaginase despite having significant applicability in medicine, holds side effects attributed to glutaminase activity and endotoxin content. Glutaminase activity proves to be toxic to non-tumor cells as glutamine is an essential amino acid. Endotoxin illicit the production of vasoactive amines and induce septic shock. Hence there is a need for glutaminase free L-asparaginase with minimum endotoxin level. The report aims at the development of a downstream process for purification of glutaminase free L-asparaginase and subsequent endotoxin removal. Producing bacteria were isolated from various soil samples and screened initially for asparaginase and glutaminase activity. The glutaminase free L-asparaginase producing bacteria were identified as <i>Bacillus altitudinis</i>. Production of L-asparaginase was optimized. The optimum medium comprised of comprising Lactose (1.5 g/L), NaCl (1.2 g/L), Yeast extract (5 g/L), L-asparagine (20 g/L) with pH 7.0 and incubation time of 18 h. Kinetic parameters Km and Vmax were computed to be 9.09x10<sup>−2</sup>M and 0.09 M/S. L-asparaginase Purification was achieved with a specific activity of 800 U/mg of enzyme. Molecular weight of the purified L-asparaginase was determined to be around 35 KDa using SDS-PAGE. The developed process also brought down the endotoxin content below the FDA recommended level. The endotoxin content of the purified enzyme was determined to be 0.015EU/mL.
DOI: 10.6084/m9.figshare.11005571
title: Descriptive statistics for factors and items

description: Four factors emerged from the data: The first factor, consisting of four items, was labelled as “perceived utility”, the second factor (seven items) as “perceived barriers”, the third factor (two items) as “perceived unfavourable teacher behaviours”, and the last factor (four items) as “perceived favourable teacher behaviours”. The factorial loadings, mean and standard deviation of the items are presented.
DOI: 10.6084/m9.figshare.11010392.v2
title: Summary of interview findings

description: The dataset provides sample statements from students.
DOI: 10.6084/m9.figshare.11005571.v2
title: Descriptive statistics for factors and items

description: Four factors emerged from the data: The first factor, consisting of four items, was labelled as “perceived utility”, the second factor (seven items) as “perceived barriers”, the third factor (two items) as “perceived unfavourable teacher behaviours”, and the last factor (four items) as “perceived favourable teacher behaviours”. The factorial loadings, mean and standard deviation of the items are presented.
DOI: 10.6084/m9.figshare.11010392.v1
title: Summary of interview findings

description: The dataset provides sample statements from students.
DOI: 10.6084/m9.figshare.11005571.v1
title: Descriptive statistics for factors and items

description: Four factors emerged from the data: The first factor, consisting of four items, was labelled as “perceived utility”, the second factor (seven items) as “perceived barriers”, the third factor (two items) as “perceived unfavourable teacher behaviours”, and the last factor (four items) as “perceived favourable teacher behaviours”. The factorial loadings, mean and standard deviation of the items are presented.
DOI: 10.6084/m9.figshare.10996616
title: The key Research Variables

description: The document contains questionnaire on service quality and customer satisfaction and loyalty
DOI: 10.6084/m9.figshare.10996784
title: Identification of Reg3β-producing cells using IL-22-stimulated enteroids

description: Reg3β, a lectin, displays antibacterial activity. This study investigated Reg3β-expressing cells using IL-22-stimulated enteroids. IL-22 stimulation elevated the mRNA and protein levels of Reg3β. IL-22 also increased the mRNA levels of CD133 (a transit-amplifying cell marker) and lysozyme (a Paneth cell marker). Immunohistochemistry showed partial colocalization of Reg3β- and lysozyme-positive cells, suggesting that Paneth cells are one of Reg3β-producing cells.
DOI: 10.6084/m9.figshare.10996784.v1
title: Identification of Reg3β-producing cells using IL-22-stimulated enteroids

description: Reg3β, a lectin, displays antibacterial activity. This study investigated Reg3β-expressing cells using IL-22-stimulated enteroids. IL-22 stimulation elevated the mRNA and protein levels of Reg3β. IL-22 also increased the mRNA levels of CD133 (a transit-amplifying cell marker) and lysozyme (a Paneth cell marker). Immunohistochemistry showed partial colocalization of Reg3β- and lysozyme-positive cells, suggesting that Paneth cells are one of Reg3β-producing cells.
DOI: 10.6084/m9.figshare.10996616.v1
title: Questionnaire on Service quality

description: The document contains questionnaire on service quality and customer satisfaction and loyalty
DOI: 10.6084/m9.figshare.10933184
title: Additional file 8 of Exploratory analysis of transposable elements expression in the C. elegans early embryo

description: Additional file 8. Significant correlations between TE and genes. Table containing the 1469 correlations with R2 &gt; = 0.4 or 25 RPM in in at least 3 replicates of at least 1 cell type) and the 6580 selected genes (expression value &gt; 25 RPKM in in at least 3 replicates of at least 1 cell type). 1st column contains TE names, 2nd gene names, 3rd R2 score, 4th p-value and 5th FDR corrected p-value.
DOI: 10.6084/m9.figshare.10933193
title: Additional file 9 of Exploratory analysis of transposable elements expression in the C. elegans early embryo

description: Additional file 9. Enriched pathways associated to genes positively correlated with TE. 1st column contains significantly enriched Reactome pathways associated to genes positively correlated with TE, evidenced by Panther tool with an FDR corrected p-value
DOI: 10.6084/m9.figshare.10933184.v2
title: Additional file 8 of Exploratory analysis of transposable elements expression in the C. elegans early embryo

description: Additional file 8. Significant correlations between TE and genes. Table containing the 1469 correlations with R2 &gt; = 0.4 or 25 RPM in in at least 3 replicates of at least 1 cell type) and the 6580 selected genes (expression value &gt; 25 RPKM in in at least 3 replicates of at least 1 cell type). 1st column contains TE names, 2nd gene names, 3rd R2 score, 4th p-value and 5th FDR corrected p-value.
DOI: 10.6084/m9.figshare.10933184.v1
title: MOESM8 of Exploratory analysis of transposable elements expression in the C. elegans early embryo

description: Additional file 8. Significant correlations between TE and genes. Table containing the 1469 correlations with R2 &gt; = 0.4 or 25 RPM in in at least 3 replicates of at least 1 cell type) and the 6580 selected genes (expression value &gt; 25 RPKM in in at least 3 replicates of at least 1 cell type). 1st column contains TE names, 2nd gene names, 3rd R2 score, 4th p-value and 5th FDR corrected p-value.
DOI: 10.6084/m9.figshare.10933193.v2
title: Additional file 9 of Exploratory analysis of transposable elements expression in the C. elegans early embryo

description: Additional file 9. Enriched pathways associated to genes positively correlated with TE. 1st column contains significantly enriched Reactome pathways associated to genes positively correlated with TE, evidenced by Panther tool with an FDR corrected p-value
DOI: 10.6084/m9.figshare.10933193.v1
title: MOESM9 of Exploratory analysis of transposable elements expression in the C. elegans early embryo

description: Additional file 9. Enriched pathways associated to genes positively correlated with TE. 1st column contains significantly enriched Reactome pathways associated to genes positively correlated with TE, evidenced by Panther tool with an FDR corrected p-value
DOI: 10.6084/m9.figshare.10933142
title: Additional file 2 of Exploratory analysis of transposable elements expression in the C. elegans early embryo

description: Additional file 2. SRA accession ID for the 164 analyzed samples. For each of the 31 C. elegans early embryo cell type is reported the NCBI-SRA database accession ID of the replicates that passed the quality filters regarding whole embryo mRNA mass according to the authors [34]. 1st column contains the names of the 31 cell types, the 2nd contains the SRA ID of each replicate separated by commas.
DOI: 10.6084/m9.figshare.10933145
title: Additional file 3 of Exploratory analysis of transposable elements expression in the C. elegans early embryo

description: Additional file 3. Raw read counts of the 163 C. elegans analyzed TE. Table containing the raw read counts measured with our pipeline. 1st column contains the names of the 163 analyzed TE. 2nd column contains the classes (DNA, LTR, LINE, RC, SINE) of the TE. Columns 3rd-166th contain the raw read counts for every sample measured with our pipeline.