cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29400212
title: Supplementary Material for: Rare complication of Renal Torsion in Autosomal Dominant Polycystic Kidney Disease following an Intraperitoneal Kidney Transplantation

description: Autosomal dominant polycystic kidney disease (ADPKD) presents in individuals with chronic renal disease due to bilateral renal cysts. This case describes the progression of the disease with the rare complication of renal torsion of the transplanted kidney in a patient with ADPKD. To our knowledge, this clinical incidence of renal torsion post-transplant has only been reported in 40 cases in the literature, of which only 3 cases involved ADPKD with two intraperitoneal and one retroperitoneal kidney allograft. The allografts in these 3 cases were salvaged by performing a nephropexy, while our novel case of intraperitoneal renal torsion in ADPKD resulted in loss of allograft viability. 

A 51-year-old female patient received a living, unrelated donor kidney transplant for end stage renal disease (ESRD) secondary to ADPKD. She underwent a bilateral native nephrectomy three years later. Five years post-transplant, the patient presented to the hospital with significant right lower quadrant abdominal discomfort, oliguria, and nausea. Following admission to the transplant service, she underwent an exploratory laparotomy which revealed a 180-degree counterclockwise torsion of the transplanted intraperitoneal kidney. Renal detorsion was attempted, however extensive renal infarction occurred, resulting in poor transplant viability. Currently, the patient is undergoing hemodialysis 3 times a week with a plan for re-transplantation when stable. The patient is continuing her immunosuppression regimen and prophylaxis in preparation for a future transplantation. 

Due to the rare incidence of renal torsion post transplantation in ADPKD, this study emphasizes the importance of post-surgical imaging and recognizing the symptoms of torsion to avoid loss of allograft viability. Promoting ongoing physician and patient education regarding surgical technique, symptom progression, and imaging protocols post transplantation is recommended, especially in complex genetic conditions such as ADPKD.
DOI: 10.6084/m9.figshare.29400212.v1
title: Supplementary Material for: Rare complication of Renal Torsion in Autosomal Dominant Polycystic Kidney Disease following an Intraperitoneal Kidney Transplantation

description: Autosomal dominant polycystic kidney disease (ADPKD) presents in individuals with chronic renal disease due to bilateral renal cysts. This case describes the progression of the disease with the rare complication of renal torsion of the transplanted kidney in a patient with ADPKD. To our knowledge, this clinical incidence of renal torsion post-transplant has only been reported in 40 cases in the literature, of which only 3 cases involved ADPKD with two intraperitoneal and one retroperitoneal kidney allograft. The allografts in these 3 cases were salvaged by performing a nephropexy, while our novel case of intraperitoneal renal torsion in ADPKD resulted in loss of allograft viability. 

A 51-year-old female patient received a living, unrelated donor kidney transplant for end stage renal disease (ESRD) secondary to ADPKD. She underwent a bilateral native nephrectomy three years later. Five years post-transplant, the patient presented to the hospital with significant right lower quadrant abdominal discomfort, oliguria, and nausea. Following admission to the transplant service, she underwent an exploratory laparotomy which revealed a 180-degree counterclockwise torsion of the transplanted intraperitoneal kidney. Renal detorsion was attempted, however extensive renal infarction occurred, resulting in poor transplant viability. Currently, the patient is undergoing hemodialysis 3 times a week with a plan for re-transplantation when stable. The patient is continuing her immunosuppression regimen and prophylaxis in preparation for a future transplantation. 

Due to the rare incidence of renal torsion post transplantation in ADPKD, this study emphasizes the importance of post-surgical imaging and recognizing the symptoms of torsion to avoid loss of allograft viability. Promoting ongoing physician and patient education regarding surgical technique, symptom progression, and imaging protocols post transplantation is recommended, especially in complex genetic conditions such as ADPKD.
DOI: 10.6084/m9.figshare.29400215
title: Supplementary Material for: Novel Application of Connectomics to the Surgical Management of Pediatric Arteriovenous Malformations

description: Introduction

The emergence of connectomics in neurosurgery has allowed for construction of detailed maps of white matter connections, incorporating both structural and functional connectivity patterns. The advantage of mapping cerebral vascular lesions to guide surgical approach shows great potential. We aim to identify the clinical utility of connectomics for the surgical treatment of pediatric arteriovenous malformations (AVM).

Case Presentation

We present two illustrative cases of the application of connectomics to the management of cerebral AVM in a 9-year-old and 8-year-old female. Using magnetic resonance anatomic and diffusion tensor imaging, a machine learning algorithm generated patient-specific representations of the corticospinal tract for the first patient, and the optic radiations for the second patient. The default mode network and language network were also examined for each patient.

The imaging output served as an adjunct to guide operative decision making. It assisted with selection of the superior parietal lobule as the operative corridor for the first case. Furthermore, it alerted the surgeon to white matter tracts in close proximity to the AVM nidus during resection. Finally, it aided in risk versus benefit analysis regarding treatment approach, such as craniotomy for resection for the first patient versus radiosurgery for the second patient. Both patients had favorable neurologic outcomes at the available follow-up period.

Conclusion

Use of the software integrated well with clinical workflow. The output was used for planning and overlaid on the intraoperative neuro-navigation system. It improved visualization of eloquent regions, especially those networks not visible on standard anatomic imaging. Future studies will focus on expanding the cohort, conducting in pre- and post-operative connectomic analysis with correlation to clinical outcome measures, and incorporating functional magnetic resonance imaging.
DOI: 10.6084/m9.figshare.29400215.v1
title: Supplementary Material for: Novel Application of Connectomics to the Surgical Management of Pediatric Arteriovenous Malformations

description: Introduction

The emergence of connectomics in neurosurgery has allowed for construction of detailed maps of white matter connections, incorporating both structural and functional connectivity patterns. The advantage of mapping cerebral vascular lesions to guide surgical approach shows great potential. We aim to identify the clinical utility of connectomics for the surgical treatment of pediatric arteriovenous malformations (AVM).

Case Presentation

We present two illustrative cases of the application of connectomics to the management of cerebral AVM in a 9-year-old and 8-year-old female. Using magnetic resonance anatomic and diffusion tensor imaging, a machine learning algorithm generated patient-specific representations of the corticospinal tract for the first patient, and the optic radiations for the second patient. The default mode network and language network were also examined for each patient.

The imaging output served as an adjunct to guide operative decision making. It assisted with selection of the superior parietal lobule as the operative corridor for the first case. Furthermore, it alerted the surgeon to white matter tracts in close proximity to the AVM nidus during resection. Finally, it aided in risk versus benefit analysis regarding treatment approach, such as craniotomy for resection for the first patient versus radiosurgery for the second patient. Both patients had favorable neurologic outcomes at the available follow-up period.

Conclusion

Use of the software integrated well with clinical workflow. The output was used for planning and overlaid on the intraoperative neuro-navigation system. It improved visualization of eloquent regions, especially those networks not visible on standard anatomic imaging. Future studies will focus on expanding the cohort, conducting in pre- and post-operative connectomic analysis with correlation to clinical outcome measures, and incorporating functional magnetic resonance imaging.
DOI: 10.6084/m9.figshare.29400218
title: Supplementary Material for: Administration of a Single Dose of Pembrolizumab, Docetaxel, and Cisplatin Leads to Complete Disappearance of a Locally Advanced Hypopharyngeal Squamous Cell Carcinoma: A Case Report

description: Introduction: Immune-checkpoint inhibition has improved the outcomes of patients with a metastatic squamous cell carcinoma in the head and neck. The combination of pembrolizumab, platinum agent, and 5-fluorouracil had been shown to improve the survival of patients with a positive programmed death ligand 1 (PD-L1) test and had become the standard treatment. Patients with a high combined positive score (CPS) of &gt;20 can be treated solely with pembrolizumab. The treatment is usually continued until disease progression. Induction immunotherapy has also shown benefits. 
Case presentation: We present a case of a locally advanced hypopharyngeal squamous cell carcinoma in a 63-year-old Arabic man who was started on pembrolizumab, docetaxel, and cisplatin for the first treatment cycle, but he failed to show up for the subsequent cycles due to the coronavirus disease 2019 pandemic restrictions. He came back after 10 months with complete clinical and radiological response.
Conclusion: The present report may possibly be the first to report a case of locally advanced squamous cell carcinoma of the hypopharynx that showed complete clinical and radiological response to a single dose of pembrolizumab, docetaxel, and cisplatin.
DOI: 10.6084/m9.figshare.29400218.v1
title: Supplementary Material for: Administration of a Single Dose of Pembrolizumab, Docetaxel, and Cisplatin Leads to Complete Disappearance of a Locally Advanced Hypopharyngeal Squamous Cell Carcinoma: A Case Report

description: Introduction: Immune-checkpoint inhibition has improved the outcomes of patients with a metastatic squamous cell carcinoma in the head and neck. The combination of pembrolizumab, platinum agent, and 5-fluorouracil had been shown to improve the survival of patients with a positive programmed death ligand 1 (PD-L1) test and had become the standard treatment. Patients with a high combined positive score (CPS) of &gt;20 can be treated solely with pembrolizumab. The treatment is usually continued until disease progression. Induction immunotherapy has also shown benefits. 
Case presentation: We present a case of a locally advanced hypopharyngeal squamous cell carcinoma in a 63-year-old Arabic man who was started on pembrolizumab, docetaxel, and cisplatin for the first treatment cycle, but he failed to show up for the subsequent cycles due to the coronavirus disease 2019 pandemic restrictions. He came back after 10 months with complete clinical and radiological response.
Conclusion: The present report may possibly be the first to report a case of locally advanced squamous cell carcinoma of the hypopharynx that showed complete clinical and radiological response to a single dose of pembrolizumab, docetaxel, and cisplatin.
DOI: 10.5281/zenodo.15735124
title: mRSubLoc: A novel multi-label learning framework integrating RNA large language model for mRNA subcellular localization

description: This data is applicable to the paper "mRSubLoc: A novel multi-label learning framework integrating RNA large language model for mRNA subcellular localization”.
DOI: 10.5281/zenodo.15735125
title: mRSubLoc: A novel multi-label learning framework integrating RNA large language model for mRNA subcellular localization

description: This data is applicable to the paper "mRSubLoc: A novel multi-label learning framework integrating RNA large language model for mRNA subcellular localization”.
DOI: 10.15468/dl.3ayxm6
title: Occurrence Download

description: A dataset containing 584 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oedalechilus labeo (Cuvier, 1829)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Material sample)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 584 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004514-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.97f8uz
title: Occurrence Download

description: A dataset containing 12966 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carex flava L.",
 "HasCoordinate is true",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 12966 records from 227 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002412-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f53qbr
title: Occurrence Download

description: A dataset containing 854147 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Prunella vulgaris L."
 ]
}

 The dataset includes 854147 records from 3127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002357-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tnxtqa
title: Occurrence Download

description: A dataset containing 32694 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "License is CC-BY-NC 4.0",
 "TaxonKey is Chelydra serpentina (Linnaeus, 1758)"
 ]
}

 The dataset includes 32694 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0247753-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9n2mpe
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrobium hepaticum J.J.Sm."
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017541-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n8yf62
title: Occurrence Download

description: A dataset containing 50826 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-122.424 37.764,-122.388 37.764,-122.388 37.8,-122.424 37.8,-122.424 37.764))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 50826 records from 208 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0265933-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3tmbh6
title: Occurrence Download

description: A dataset containing 1520 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Herbario del Museo Municipal de Historia Natural de San Rafael (MMHNSR), Mendoza. Argentina"
 ]
}

 The dataset includes 1520 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0223454-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dqsyx2
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hodgsonia heteroclita (Roxb.) Hook.fil. & Thomson"
 ]
}

 The dataset includes 90 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0247764-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tphys6
title: Occurrence Download

description: A dataset containing 3171 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Tragulus Smith, 1827, Tragulus Brisson, 1762)"
 ]
}

 The dataset includes 3171 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220555-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nu89wb
title: Occurrence Download

description: A dataset containing 203677 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Diospyros L."
 ]
}

 The dataset includes 203677 records from 1076 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0247743-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.skaate
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "GadmGid is AUS",
 "TaxonKey is Auriscalpium Gray"
 ]
}

 The dataset includes 20 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0255407-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mg6ntb
title: Occurrence Download

description: A dataset containing 1096 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sciurus lis Temminck, 1844",
 "Year 1823-2023"
 ]
}

 The dataset includes 1096 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008201-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zq8jc7
title: Occurrence Download

description: A dataset listing the 139 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Estudio taxonómico y zoogeográfico de áreas selectas de peces marinos en Laguna Madre y Costas de Tamaulipas, Veracruz y Campeche, México",
 "Geometry POLYGON((-98.12803 23.59353,-97.17054 23.59353,-97.17054 25.27893,-98.12803 25.27893,-98.12803 23.59353))"
 ]
}

 The dataset's 139 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007393-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.km4d99
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-9879.0",
 "TaxonKey is Telescopus tripolitanus (Werner, 1909)"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0212911-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vamxvd
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gurania cinerea Suess."
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0233999-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhnkc6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epania septemtrionalis Hayashi, 1951",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224777-220831081235567/datasets/export for details.
DOI: 10.15468/dl.8tt3zs
title: Occurrence Download

description: A dataset containing 5664 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation, Occurrence evidence)",
 "Continent is North America",
 "TaxonKey is one of (Ceanothus americanus L., Ceanothus americanus Mill., 1760)",
 "Year 1900-2023"
 ]
}

 The dataset includes 5664 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004184-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dy6b9w
title: Occurrence Download

description: A dataset containing 957432 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Natural History Museum Rotterdam - Observations"
 ]
}

 The dataset includes 957432 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0212919-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzpnv5
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "MediaType is Image",
 "TaxonKey is Desmodesmus denticulatus (Lagerh.) S.S.An, Friedl & E.Hegewald"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0223455-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sm9n8z
title: Occurrence Download

description: A dataset listing the 108 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Maritimes Summer Research Vessel Surveys, Maritimes Spring Research Vessel Surveys)",
 {
 "or" : [
 "Geometry POLYGON((-63.70846 43.20637,-62.36701 43.20637,-62.36701 44.09752,-63.70846 44.09752,-63.70846 43.20637))",
 "Geometry POLYGON((-63.60248 43.15116,-62.30272 43.15116,-62.30272 44.10781,-63.60248 44.10781,-63.60248 43.15116))"
 ]
 },
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2018-2023"
 ]
}

 The dataset's 108 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0265926-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qpytsj
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gurania cogniauxiana Rodr."
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0234000-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.