cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10476309
title: Data files for "Quantifying the global climate feedback from energy-based adaptation"

description: Data files for "Quantifying the global climate feedback from energy-based adaptation".

Findings of the paper can be replicated using these data files, along with code at https://github.com/xabajian/ACDM_Climate_Adaptation_Feedback.

Please contact Alexander Abajian <xander.abajian@gmail.com> with any questions regarding the enclosed files.

 

Attribution:

Some processed data contain excerpts of Non-Creative Commons Material as defined by the International Energy Agency (IEA -- see their terms of use at `https://www.iea.org/terms/terms-of-use-for-non-cc-material'). The emissions factors we use in our analysis are generated using IEA datasets. These data are aggregates of the underlying country-by-fuel level emissions factors and as presented contain only insubstantial amounts of the Non-CC Material. We attest they cannot be used to reconstruct individual data points in the original dataset. The factors we produce are attributable to the following two sources: 

IEA. Emissions factors. Tech. Rep., International Energy Agency (IEA 2021). URL https://www.iea.org/data-and-statistics/data-product/910emissions-factors-2021. All Rights Reserved.

IEA. World energy balances 2021. Tech. Rep., International Energy Agency (IEA) (2022). URL https://www.iea.org/data-and-statistics/data-product/world-energy-balances. All Rights Reserved.
DOI: 10.5281/zenodo.10476310
title: Data files for "Quantifying the global climate feedback from energy-based adaptation"

description: Data files for "Quantifying the global climate feedback from energy-based adaptation".

Findings of the paper can be replicated using these data files, along with code at https://github.com/xabajian/ACDM_Climate_Adaptation_Feedback.

Please contact Alexander Abajian <xander.abajian@gmail.com> with any questions regarding the enclosed files.

 

Attribution:

Some processed data contain excerpts of Non-Creative Commons Material as defined by the International Energy Agency (IEA -- see their terms of use at `https://www.iea.org/terms/terms-of-use-for-non-cc-material'). The emissions factors we use in our analysis are generated using IEA datasets. These data are aggregates of the underlying country-by-fuel level emissions factors and as presented contain only insubstantial amounts of the Non-CC Material. We attest they cannot be used to reconstruct individual data points in the original dataset. The factors we produce are attributable to the following two sources: 

IEA. Emissions factors. Tech. Rep., International Energy Agency (IEA 2021). URL https://www.iea.org/data-and-statistics/data-product/910emissions-factors-2021. All Rights Reserved.

IEA. World energy balances 2021. Tech. Rep., International Energy Agency (IEA) (2022). URL https://www.iea.org/data-and-statistics/data-product/world-energy-balances. All Rights Reserved.
DOI: 10.15468/dl.7xhsyn
title: Occurrence Download

description: A dataset containing 323 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["7979280"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 323 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002698-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xfpvw4
title: Occurrence Download

description: A dataset containing 500 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["9284073"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 500 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002697-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c4wuww
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["7434550"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 40 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002699-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14714792
title: Measure still for measure: on the evaluation of threat modeling methods and tools: supporting materials
DOI: 10.5281/zenodo.14898225
title: Dataset regarding manuscript: Atmospheric sulfate aerosol formation enhanced by interfacial anions
DOI: 10.5281/zenodo.14898226
title: Dataset regarding manuscript: Atmospheric sulfate aerosol formation enhanced by interfacial anions
DOI: 10.15468/dl.sasd5h
title: Occurrence Download

description: A dataset containing 518 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["10334868"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 518 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002703-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzp6y3
title: Occurrence Download

description: A dataset containing 761 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["3057656"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 761 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002701-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9uv3qf
title: Occurrence Download

description: A dataset containing 2133 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["3072953"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 2133 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002702-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k9khqg
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-97.99081 17.30761,-52.00919 17.30761,-52.00919 35.69239,-97.99081 35.69239,-97.99081 17.30761))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ginoria americana Jacq."
 ]
}

 The dataset includes 48 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002704-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9byejt
title: Occurrence Download

description: A dataset containing 467 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["7269365"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 467 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002705-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ccn7md
title: Occurrence Download

description: A dataset containing 430 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["3071716"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 430 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002706-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zu7wg6
title: Occurrence Download

description: A dataset containing 2215 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["3169674"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 2215 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002707-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rzjhsc
title: Occurrence Download

description: A dataset containing 18809 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-19.66169 25.08645,37.93197 25.08645,37.93197 45.09552,-19.66169 45.09552,-19.66169 25.08645))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (April, May, June, July, August, September, October)",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (e2e717bf-551a-4917-bdc9-4fa0f342c530, 1928bdf0-f5d2-11dc-8c12-b8a03c50a862)",
 "TaxonKey is Falco eleonorae Géné, 1839",
 "Year 1960-2025"
 ]
}

 The dataset includes 18809 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002708-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3e2ydb
title: Occurrence Download

description: A dataset containing 2319157 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Tracheophyta",
 "Geometry POLYGON((70 20, 105 20, 105 40, 70 40, 70 20))"
 ]
}

 The dataset includes 2319157 records from 491 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002692-250218110819086/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccy2ds5
title: CCDC 866257: Experimental Crystal Structure Determination

description: Related Article: P.S.Hanley, J.F.Hartwig|2011|J.Am.Chem.Soc.|133|15661|doi:10.1021/ja205722f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccy2dt6
title: CCDC 866258: Experimental Crystal Structure Determination

description: Related Article: P.S.Hanley, J.F.Hartwig|2011|J.Am.Chem.Soc.|133|15661|doi:10.1021/ja205722f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7603324
title: Experimental evidence for short term directional selection of epigenetic trait variation

description: This Arabidosis data folder includes 5 folders providing the data and code associated with the publication entitled "Experimental evidence for short term directional selection of epigenetic trait variation" by Pujol et al.  in Peer Community Journal:

"in Silico 1000 resampling" folder includes two folders; one for Population 1, and one for Population 2, each including 24 files. Each file presents the 1000 lists of plant IDs that were randomly sampled to build control groups (listrand), and the corresponding lists of plant IDs selected on the basis of trait values to build the corresponding high (Top) and low (Bot) selection lines, for the strong (20) and weak (60) selection intensities.

“phenotypic and epiril data” includes two csv files; data_pop1 and data_pop2, respectively for population 1 and 2, and a readme txt file that presents the data included in the files.

“scripts R epigenomic selection” includes two R script files: “PCA_arabidopsis”, which includes the R code used to conduct the PCA analysis on epiRIL data and “Arabette_analysis_loop_Epigenotypes_data”, which is used to insert that epigenotype data in the analysis.

“scripts R epigenomic validation” includes nine R scripts used to conduct tests of molecular epigenomic data validation and comparison with existing data from the literature:  “Script 1 Extract 126 markers from BSMAP ouput files and apply methylkit”, “Script 2 Boxplots of the BS signal distribution for the 126 markers and their correspondence to published HMM classification”, “Script 3 Correlation between EM-seq and BS seq_published_data for the 126 markers”, “Script 4 Correlation between the BS signals of EM-seq and WGBS data for the 126markers”, “Script 5 Hierarchical clustering of the epiRILs EM-seq and published epigenomic data”, “cluster and PCA analysis of Col wt vs 24 sequenced epiRILs”, which filenames are self-explanatory. “methylkit_epiRILs_vs_Col_wt_DMCs” was used to use methylkit in order to identify Differentially Methylated Cytosines between epiRILs and in comparison to Col-0. “methylkit_tiles_script” was used to build the tiles in Methylkit. “verif DMR CHG context” was used to verify differentially methylated regions in the CHG context.

“scripts R phenotypic selection” includes four R scripts “Arabette_analysis”, “Arabette_analysis_loop_Phenotypes_data”, “Arabette_analysis_loop_pop1_final”, “Arabette_analysis_loop_pop2_final” that were used to estimate the parameters used for comparing selection treatments, in other words, to estimate means and confidence intervals (“loop” scripts) in population 1 (“pop1” script) and population 2 (“pop2” script)
DOI: 10.5281/zenodo.7603325
title: Experimental evidence for short term directional selection of epigenetic trait variation

description: This Arabidosis data folder includes 5 folders providing the data and code associated with the publication entitled "Experimental evidence for short term directional selection of epigenetic trait variation" by Pujol et al.  in Peer Community Journal:

"in Silico 1000 resampling" folder includes two folders; one for Population 1, and one for Population 2, each including 24 files. Each file presents the 1000 lists of plant IDs that were randomly sampled to build control groups (listrand), and the corresponding lists of plant IDs selected on the basis of trait values to build the corresponding high (Top) and low (Bot) selection lines, for the strong (20) and weak (60) selection intensities.

“phenotypic and epiril data” includes two csv files; data_pop1 and data_pop2, respectively for population 1 and 2, and a readme txt file that presents the data included in the files.

“scripts R epigenomic selection” includes two R script files: “PCA_arabidopsis”, which includes the R code used to conduct the PCA analysis on epiRIL data and “Arabette_analysis_loop_Epigenotypes_data”, which is used to insert that epigenotype data in the analysis.

“scripts R epigenomic validation” includes nine R scripts used to conduct tests of molecular epigenomic data validation and comparison with existing data from the literature:  “Script 1 Extract 126 markers from BSMAP ouput files and apply methylkit”, “Script 2 Boxplots of the BS signal distribution for the 126 markers and their correspondence to published HMM classification”, “Script 3 Correlation between EM-seq and BS seq_published_data for the 126 markers”, “Script 4 Correlation between the BS signals of EM-seq and WGBS data for the 126markers”, “Script 5 Hierarchical clustering of the epiRILs EM-seq and published epigenomic data”, “cluster and PCA analysis of Col wt vs 24 sequenced epiRILs”, which filenames are self-explanatory. “methylkit_epiRILs_vs_Col_wt_DMCs” was used to use methylkit in order to identify Differentially Methylated Cytosines between epiRILs and in comparison to Col-0. “methylkit_tiles_script” was used to build the tiles in Methylkit. “verif DMR CHG context” was used to verify differentially methylated regions in the CHG context.

“scripts R phenotypic selection” includes four R scripts “Arabette_analysis”, “Arabette_analysis_loop_Phenotypes_data”, “Arabette_analysis_loop_pop1_final”, “Arabette_analysis_loop_pop2_final” that were used to estimate the parameters used for comparing selection treatments, in other words, to estimate means and confidence intervals (“loop” scripts) in population 1 (“pop1” script) and population 2 (“pop2” script)
DOI: 10.5517/ccwk8b0
title: CCDC 820952: Experimental Crystal Structure Determination

description: Related Article: M.E.Moragues, J.Esteban, J.V.Ros-Lis, R.Martinez-Manez, M.D.Marcos, M.Martinez, J.Soto, F.Sancenon|2011|J.Am.Chem.Soc.|133|15762|doi:10.1021/ja206251r
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccx67v5
title: CCDC 840157: Experimental Crystal Structure Determination

description: Related Article: Luo Mei, Liu Shuang Tai, Feng Hai Tao, Sun Jie, Li Qian Rong|2012|Res.Chem.Intermed.|38|499|doi:10.1007/s11164-011-0366-z
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccvr52t
title: CCDC 796826: Experimental Crystal Structure Determination

description: Related Article: Xi-Zhu Chen, Qing-Song Ye, Ming-Jin Xie, Jia-Lin Chen, Zai-Fu Pan, Wei-Ping Liu|2012|Res.Chem.Intermed.|38|421|doi:10.1007/s11164-011-0358-z
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccx67w6
title: CCDC 840158: Experimental Crystal Structure Determination

description: Related Article: Luo Mei, Liu Shuang Tai, Feng Hai Tao, Sun Jie, Li Qian Rong|2012|Res.Chem.Intermed.|38|499|doi:10.1007/s11164-011-0366-z
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccrx16w
title: CCDC 712138: Experimental Crystal Structure Determination

description: Related Article: Z.Derikvand, G.R.Talei, H.Aghabozorg, M.M.Olmstead, A.Azadbakht, A.Nemati, J.A.Gharamaleki|2010|Chin.J.Chem.|28|2167|doi:10.1002/cjoc.201090358
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cctj47p
title: CCDC 760282: Experimental Crystal Structure Determination

description: Related Article: Xiaoyan You, Lixia Zhu, Jia Sun|2010|Chin.J.Chem.|28|2174|doi:10.1002/cjoc.201090359
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8s5t0
title: CCDC 261572: Experimental Crystal Structure Determination

description: Related Article: Jiayang Chen, Xiangxiang Ren, Xueyi Le, Xiaolong Feng|2010|Chin.J.Chem.|28|2179|doi:10.1002/cjoc.201090360
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc9vk0p
title: CCDC 293632: Experimental Crystal Structure Determination

description: Related Article: Xueyan Yang, Xianjin Yang, Shengjie Zhu, Lingling Ye, Yang Chen, Guanlong Chen, Fanhong Wu|2010|Chin.J.Chem.|28|2269|doi:10.1002/cjoc.201090375
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.17801.11368
title: Best Developmental Delays Book of All Time
DOI: 10.5517/cctc33c
title: CCDC 755442: Experimental Crystal Structure Determination

description: Related Article: Lin An, Feng Yang, Rong Yao, Chaoguo Yan|2010|Chin.J.Chem.|28|2451|doi:10.1002/cjoc.201190020
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.