cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.y56g38
title: Occurrence Download

description: A dataset containing 8722 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Geometry POLYGON((-79.4551 -3.52271,-79.45099 -3.54827,-79.45594 -3.57331,-79.45594 -3.60123,-79.45082 -3.59999,-79.43686 -3.58268,-79.42997 -3.5795,-79.40789 -3.57985,-79.40859 -3.57013,-79.39782 -3.56112,-79.4021 -3.54638,-79.41332 -3.53623,-79.43125 -3.51644,-79.4551 -3.52271))",
 "Geometry POLYGON((-79.50362 -3.52884,-79.49708 -3.56912,-79.50008 -3.58149,-79.49231 -3.59703,-79.45927 -3.60233,-79.4538 -3.54757,-79.4591 -3.5246,-79.50362 -3.52884))"
 ]
 },
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 8722 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004048-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15233444
title: Global Gene Silencing Market 2024 To 2033

description: Gene Silencing Market Size, Trends and Insights By Gene Silencing Method (RNA Interference (RNAi), Antisense Oligonucleotides (ASOs), CRISPR/Cas9-Based Gene Silencing, Others), By Application (Cancer Therapeutics, Neurological Disorders, Genetic Disorders, Infectious Diseases, Others), By End-Users (Pharmaceutical and Biotechnology Companies, Research Institutes and Academic Centers, Hospitals, Clinics, Others), and By Region - Global Industry Overview, Statistical Data, Competitive Analysis, Share, Outlook, and Forecast 2024–2033.

Reports Description

As per the current market research conducted by the CMI Team, the global Gene Silencing Market is expected to record a CAGR of 8.2% from 2024 to 2033. In 2024, the market size is projected to reach a valuation of USD 5.2 Billion. By 2033, the valuation is anticipated to reach USD 10.6 Billion.

The Gene Silencing market involves the development, commercialization, and application of technologies that selectively regulate or inhibit the expression of genes. Utilizing methods such as RNA interference (RNAi) and CRISPR/Cas9, the market addresses diverse therapeutic areas, including oncology, neurology, and genetic disorders.

Key players like Alnylam Pharmaceuticals and Arrowhead Pharmaceuticals drive innovation. The market witnesses a dynamic landscape, with ongoing advancements, strategic collaborations, and increasing investments, reflecting its pivotal role in developing targeted therapies for various diseases by modulating gene expression.

For more information, DOWNLOAD FREE SAMPLE Now at https://www.custommarketinsights.com/request-for-free-sample/?reportid=43466
DOI: 10.5281/zenodo.15233445
title: Global Gene Silencing Market 2024 To 2033

description: Gene Silencing Market Size, Trends and Insights By Gene Silencing Method (RNA Interference (RNAi), Antisense Oligonucleotides (ASOs), CRISPR/Cas9-Based Gene Silencing, Others), By Application (Cancer Therapeutics, Neurological Disorders, Genetic Disorders, Infectious Diseases, Others), By End-Users (Pharmaceutical and Biotechnology Companies, Research Institutes and Academic Centers, Hospitals, Clinics, Others), and By Region - Global Industry Overview, Statistical Data, Competitive Analysis, Share, Outlook, and Forecast 2024–2033.

Reports Description

As per the current market research conducted by the CMI Team, the global Gene Silencing Market is expected to record a CAGR of 8.2% from 2024 to 2033. In 2024, the market size is projected to reach a valuation of USD 5.2 Billion. By 2033, the valuation is anticipated to reach USD 10.6 Billion.

The Gene Silencing market involves the development, commercialization, and application of technologies that selectively regulate or inhibit the expression of genes. Utilizing methods such as RNA interference (RNAi) and CRISPR/Cas9, the market addresses diverse therapeutic areas, including oncology, neurology, and genetic disorders.

Key players like Alnylam Pharmaceuticals and Arrowhead Pharmaceuticals drive innovation. The market witnesses a dynamic landscape, with ongoing advancements, strategic collaborations, and increasing investments, reflecting its pivotal role in developing targeted therapies for various diseases by modulating gene expression.

For more information, DOWNLOAD FREE SAMPLE Now at https://www.custommarketinsights.com/request-for-free-sample/?reportid=43466
DOI: 10.15468/dl.543fyb
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Stapfochloa ciliata (Sw.) P.M.Peterson)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 41 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040805-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-4238/1
title: multitracker_RMR_w_recognition_CSRT_tracker.py

description: - the first step in the experimental evaluation is the tracking via opencv
- it is important to note that the tracking requires images that are in one directory/folder and sorted in the necessary order through which the algorithm is to run through
- prior to the tracking the images should be cropped to a necessary size, in the case of the tracking for this thesis the images were captured via a basler highspeed camera in which the necessary mask/crop of the image was automatically introduced

- to run the analysis the captures are analysed and must have the same undisturbed imaging
DOI: 10.18419/darus-4238/2
title: working_env_RMR.yml

description: This is the YML file that details the proper python enviroment.
DOI: 10.18419/darus-4238/3
title: total_circ.py

description: :unav
DOI: 10.18419/darus-4238/4
title: Floor_Hit_counter.py

description: :unav
DOI: 10.18419/darus-4238/5
title: combined _results_hit_counts.py

description: :unav
DOI: 10.18419/darus-4238/6
title: general_code_for combination_of_results.py

description: :unav
DOI: 10.18419/darus-4238/7
title: velocity_plotter_40mm.py

description: code for 40 mm LP.
DOI: 10.18419/darus-4238/10
title: historgam_maker_velocity.py

description: :unav
DOI: 10.18419/darus-4238/11
title: heat_map_std_calc.py

description: :unav
DOI: 10.18419/darus-4238/12
title: stack_overflow_code_for_heat_maps_std.py

description: This code was used for debugging and testing the idea of the actual code "heat_map_std_calc.py"
DOI: 10.18419/darus-4238/13
title: CFD_vel_map.py

description: :unav
DOI: 10.18419/darus-4238/8
title: velocity_plotter.py

description: code for 25 mm LP.
DOI: 10.18419/darus-4238/9
title: historgam_maker_position.py

description: :unav
DOI: 10.18419/darus-4238/14
title: calculations_25mm.opju

description: This is the origin datasheet which contains all relevant plots and data used in the related publication. The results contain raw data based on the images processed as raw data with the respective python codes. This data sheet relates to the 25mm LP.
DOI: 10.18419/darus-4238/15
title: calculations_40mm.opju

description: This is the origin datasheet which contains all relevant plots and data used in the related publication. The results contain raw data based on the images processed as raw data with the respective python codes. This data sheet relates to the 40mm LP.
DOI: 10.18419/darus-4238/16
title: 40mm_results.7z

description: :unav
DOI: 10.18419/darus-4238/17
title: 25mm_results.7z

description: :unav
DOI: 10.18419/darus-4238/18
title: finished_CFD_sims.7z

description: :unav
DOI: 10.15468/dl.gqgmu6
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Stapfochloa elata (Desv.) P.M.Peterson)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040806-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12654690
title: Appendix for Review Paper Entitled: "A literature review of "lawful" text and data mining."

description: This appendix complements the review paper entitled ““A literature review of “lawful” text and data mining” with 8 Tables highlighting which scholarly works were used for each section of the literature review, but also how those works were used.
DOI: 10.5281/zenodo.12654691
title: Appendix for Review Paper Entitled: "A literature review of "lawful" text and data mining."

description: This appendix complements the review paper entitled ““A literature review of “lawful” text and data mining” with 8 Tables highlighting which scholarly works were used for each section of the literature review, but also how those works were used.
DOI: 10.15468/dl.4fp7k9
title: Occurrence Download

description: A dataset containing 1368 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Staphylea japonica (Thunb.) Mabb.)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 1368 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040807-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjdbbs
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Turpinia occidentalis subsp. occidentalis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 35 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040808-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cwbbry
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Elephas maximus sumatranus Temminck, 1847",
 "Year 2014-2024"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040809-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rgknwy
title: Occurrence Download

description: A dataset containing 838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Steatoda castanea (Clerck, 1757))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 838 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040810-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26392972
title: SUD raw data 2024.07.29

description: The transient receptor potential melastatin 7 channel (TRPM7) is a non-selective cation channel highly expressed in some human cancer tissues. TRPM7 is involved in the proliferation, migration, invasion, and epithelial-mesenchymal transition (EMT) of cancer cells. Modulation of TRPM7 could be a promising therapeutic strategy for treating cancer, however, efficient and selective pharmacological TRPM7 modulators are lacking. In this study we investigated N- [ 4- (4, 6- dimethyl- 2- pyrimidinyloxy) - 3- methylphenyl] -N' - [ 2 -(dimethylamino)] benzoylurea (SUD), a newly synthesized benzoylurea derivative, for its effects on cancer cell migration and EMT and on functional expression of TRPM7. Our previous studies showed that SUD induces cell cycle arrest and apoptosis of MCF-7 and BGC-823 cells (human breast cancer and gastric cancer cell lines, respectively). Here we show that SUD significantly decreased the migration of both types of cancer cells. Moreover, SUD decreased vimentin expression and increased E-cadherin expression in both cell types, indicating that EMT is also decreased by SUD. Importantly, SUD potentially reduced the TRPM7-like current in a concentration-dependent manner and decreased TRPM7 expression through the PI3K/Akt signaling pathway. Finally, molecular docking simulations were used to investigate potential SUD binding sites on TRPM7. In summary, our research demonstrated that SUD is an effective TRPM7 inhibitor and a potential agent to suppress the metastasis of breast and gastric cancer by inhibiting TRPM7 expression and function.
DOI: 10.6084/m9.figshare.26392972.v1
title: SUD raw data 2024.07.29

description: The transient receptor potential melastatin 7 channel (TRPM7) is a non-selective cation channel highly expressed in some human cancer tissues. TRPM7 is involved in the proliferation, migration, invasion, and epithelial-mesenchymal transition (EMT) of cancer cells. Modulation of TRPM7 could be a promising therapeutic strategy for treating cancer, however, efficient and selective pharmacological TRPM7 modulators are lacking. In this study we investigated N- [ 4- (4, 6- dimethyl- 2- pyrimidinyloxy) - 3- methylphenyl] -N' - [ 2 -(dimethylamino)] benzoylurea (SUD), a newly synthesized benzoylurea derivative, for its effects on cancer cell migration and EMT and on functional expression of TRPM7. Our previous studies showed that SUD induces cell cycle arrest and apoptosis of MCF-7 and BGC-823 cells (human breast cancer and gastric cancer cell lines, respectively). Here we show that SUD significantly decreased the migration of both types of cancer cells. Moreover, SUD decreased vimentin expression and increased E-cadherin expression in both cell types, indicating that EMT is also decreased by SUD. Importantly, SUD potentially reduced the TRPM7-like current in a concentration-dependent manner and decreased TRPM7 expression through the PI3K/Akt signaling pathway. Finally, molecular docking simulations were used to investigate potential SUD binding sites on TRPM7. In summary, our research demonstrated that SUD is an effective TRPM7 inhibitor and a potential agent to suppress the metastasis of breast and gastric cancer by inhibiting TRPM7 expression and function.
DOI: 10.15468/dl.sepr7m
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Elephas maximus sumatranus Temminck, 1847",
 "Year 2014-2024"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040811-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c89sv7
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Elephas maximus sumatranus Temminck, 1847",
 "Year 2014-2024"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040813-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3y3xy7
title: Occurrence Download

description: A dataset containing 20733 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Stellaria apetala Bernardino)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 20733 records from 292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040812-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yperc9
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fungarium of Central Siberian Botanical Garden, NSK (curated by Gorbunova Irina A.)"
 ]
}

 The dataset includes 205 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040814-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13120215
title: RoMEMES

description: RoMEMES is a dataset of Romanian language memes, collected from public social media platforms. The dataset was manually annotated with: associated text in Romanian language, image complexity, sentiment, political content. In addition, the dataset contains associated metadata and the text part was automatically annotated in the RELATE platform with part-of-speech tags, lemmas, and dependency parsing.

Files and folders in this dataset:



metadata.tsv - contains metadata and annotations; the first column is the file ID

text - folder containing text files, following the file naming convention ID.txt

images - folder containing image files, following the file naming convention ID.extension, where extension is the original file extension (sometimes this may not correspond with the mime/type of the file, as indicated in metadata.tsv)

conllup - folder containing automatic text annotations, created in the RELATE platform, following the file naming convention ID.conllup
DOI: 10.5281/zenodo.13120216
title: RoMEMES

description: RoMEMES is a dataset of Romanian language memes, collected from public social media platforms. The dataset was manually annotated with: associated text in Romanian language, image complexity, sentiment, political content. In addition, the dataset contains associated metadata and the text part was automatically annotated in the RELATE platform with part-of-speech tags, lemmas, and dependency parsing.

Files and folders in this dataset:



metadata.tsv - contains metadata and annotations; the first column is the file ID

text - folder containing text files, following the file naming convention ID.txt

images - folder containing image files, following the file naming convention ID.extension, where extension is the original file extension (sometimes this may not correspond with the mime/type of the file, as indicated in metadata.tsv)

conllup - folder containing automatic text annotations, created in the RELATE platform, following the file naming convention ID.conllup
DOI: 10.15468/dl.29sc39
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Stellaria cupaniana (Jord. & Fourr.) Bég.)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 136 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040815-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13081408
title: Trial Data

description: The purpose of this data is to test out a certain pipeline. Please use this for trial only
DOI: 10.5281/zenodo.13081409
title: Trial Data

description: The purpose of this data is to test out a certain pipeline. Please use this for trial only
DOI: 10.15468/dl.7qeywc
title: Occurrence Download

description: A dataset containing 23619 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Stellaria media subsp. media)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 23619 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040816-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8pkv75
title: Occurrence Download

description: A dataset containing 581 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron simiarum Hance"
 ]
}

 The dataset includes 581 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040817-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.58160/dxxuylafjahzrouv
title: Proteomic data _ Identification of neutral sphingomyelinase-2 (NSM2) proximal proteins by APEX2-mediated proximity labeling in Jurkat cells

description: Proteomic mass spectrometry data supplementing the data published in the thesis: Identification of NSM2 proximal proteins by APEX2-mediated proximity labeling in Jurkat cells.
description: The csv files contain tables that list proteins identified by label free LC-MS and their Log2 Fold Changes (Log2FC) and p values. Information about the individual csv files can be found in the "readme.txt”.
description: A proximity labeling strategy was used based on the engineered ascorbate peroxidase 2 (APEX2) to explore the neutral sphingomyelinase 2 (NSM2) proximitome, specifically in Jurkat cells. For this purpose, cell lines stably expressing NSM2 fused to APEX2 at the C-terminus were generated. NSM2-APEX2 proximal proteins covalently labeled with biotin were purified using streptavidin-coated beads and identified by mass spectrometry (MS). The first analysis of NSM2-APEX2 labeling by MS accurately identified proteins under steady-state conditions (published in 10.3390/ijms25063247). Further, I applied the proximity labeling protocol to elucidate TNFα-induced alterations in the NSM2 proximitome within the first 5 minutes of stimulation (published in 10.3389/fimmu.2024.1435701). The NSM2 proximal network and its TNFα-induced changes provide a valuable resource for further investigations into the involvement of NSM2 in the early signaling pathways triggered by TNFα.
description: Mass spectrometry based proteomics
DOI: 10.15468/dl.mbspaj
title: Occurrence Download

description: A dataset containing 20733 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Stellaria apetala Bernardino)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 20733 records from 292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040818-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.