cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ut5zx5
title: Occurrence Download

description: A dataset listing the 29 species recorded in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is cdef28b1-db4e-4c58-aa71-3c5238c2d0b5",
 "TaxonKey is Platyhelminthes"
 ]
}

 The dataset's 29 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115865-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s9ap55
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is cdef28b1-db4e-4c58-aa71-3c5238c2d0b5",
 "TaxonKey is Echinodermata"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115866-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26123623
title: miRNAs in patients with alcoholic liver disease: a systematic review and meta-analysis

description: Alcoholic liver disease (ALD) encompasses a spectrum of liver conditions, including liver steatosis, alcoholic hepatitis (AH), fibrosis, cirrhosis, and hepatocellular carcinoma (HCC). microRNAs (miRNAs) have garnered significant interest as potential biomarkers for ALD. We searched PubMed, Embase, Web of Science and Cochrane Central Register of Controlled Trials (CENTRAL) systemically from inception to June 2024. All extracted data was stratified according to the stages of ALD. The vote-counting strategy performed a meta-analysis on miRNA expression profiles. We included 40 studies. In serum of individuals with alcohol-use vs. no alcohol-use, miRNA-122 and miRNA-155 were upregulated, and miRNA-146a was downregulated. In patients with ALD vs. healthy controls, miRNA-122 and miRNA-155 were also upregulated, and miRNA-146a was downregulated. However, in patients with AH vs. healthy individuals, only the serum miRNA-122 level was upregulated. Due to insufficient data on diagnostic accuracy, we failed to conclude the ability of miRNAs to distinguish between different stages of ALD-related liver fibrosis. The results for ALD-related HCC were also insufficient and controversial. Circulating miRNA-122 was the most promising biomarker to manage individuals with ALD. More studies were needed for the diagnostic accuracy of miRNAs in ALD. This protocol was registered on the International Prospective Register of Systematic Reviews (PROSPERO) (www.crd.york.ac.uk/prospero/) with registration number CRD42023391931.
DOI: 10.6084/m9.figshare.26123623.v1
title: miRNAs in patients with alcoholic liver disease: a systematic review and meta-analysis

description: Alcoholic liver disease (ALD) encompasses a spectrum of liver conditions, including liver steatosis, alcoholic hepatitis (AH), fibrosis, cirrhosis, and hepatocellular carcinoma (HCC). microRNAs (miRNAs) have garnered significant interest as potential biomarkers for ALD. We searched PubMed, Embase, Web of Science and Cochrane Central Register of Controlled Trials (CENTRAL) systemically from inception to June 2024. All extracted data was stratified according to the stages of ALD. The vote-counting strategy performed a meta-analysis on miRNA expression profiles. We included 40 studies. In serum of individuals with alcohol-use vs. no alcohol-use, miRNA-122 and miRNA-155 were upregulated, and miRNA-146a was downregulated. In patients with ALD vs. healthy controls, miRNA-122 and miRNA-155 were also upregulated, and miRNA-146a was downregulated. However, in patients with AH vs. healthy individuals, only the serum miRNA-122 level was upregulated. Due to insufficient data on diagnostic accuracy, we failed to conclude the ability of miRNAs to distinguish between different stages of ALD-related liver fibrosis. The results for ALD-related HCC were also insufficient and controversial. Circulating miRNA-122 was the most promising biomarker to manage individuals with ALD. More studies were needed for the diagnostic accuracy of miRNAs in ALD. This protocol was registered on the International Prospective Register of Systematic Reviews (PROSPERO) (www.crd.york.ac.uk/prospero/) with registration number CRD42023391931.
DOI: 10.6084/m9.figshare.26108126
title: Cost-effectiveness of tislelizumab plus chemotherapy vs chemotherapy as first-line treatment of PD-L1 positive advanced gastric or gastroesophageal junction adenocarcinoma from a Chinese perspective

description: This work was designed to assess the cost-effectiveness of front-line tislelizumab plus chemotherapy (TIS+Chemo) in advanced gastric cancer (GC) or gastroesophageal junction cancer (GEJC) with positive expression of programmed cell death ligand 1 (PD-L1) from the perspective of Chinese healthcare system. A 10-year partitioned survival model was undertaken utilizing clinical data from RATIONALE 305. Costs and utilities were both discounted at an annual rate of 5%. The primary outcome was incremental cost-effectiveness ratios (ICERs) and calculated as the cost per quality-adjusted life years (QALYs). The willingness-to-pay (WTP) threshold was set as $18,625/QALY. Only direct medical costs were considered. Sensitivity analyses and subgroup analyses were performed to evaluate the robustness of the model. In the base-case analysis, the incremental cost and effectiveness associated with TIS+Chemo vs Chemo was 7,361 and 0.38 QALYs, respectively, leading to an ICER of 19,371/QALY. At the WTP threshold of $18,625/QALY, the TIS+Chemo was not a cost-effective first-line treatment option. The model outcomes were robust. TIS+Chemo did not provide a cost-effective approach for PD-L1 positive advanced GC/GEJC in China setting. However, TIS+Chemo might be cost-effective in provinces with higher WTP threshold. RATIONALE 305, www.clinicaltrials.gov, identifier is NCT03777657.
DOI: 10.6084/m9.figshare.26108126.v1
title: Cost-effectiveness of tislelizumab plus chemotherapy vs chemotherapy as first-line treatment of PD-L1 positive advanced gastric or gastroesophageal junction adenocarcinoma from a Chinese perspective

description: This work was designed to assess the cost-effectiveness of front-line tislelizumab plus chemotherapy (TIS+Chemo) in advanced gastric cancer (GC) or gastroesophageal junction cancer (GEJC) with positive expression of programmed cell death ligand 1 (PD-L1) from the perspective of Chinese healthcare system. A 10-year partitioned survival model was undertaken utilizing clinical data from RATIONALE 305. Costs and utilities were both discounted at an annual rate of 5%. The primary outcome was incremental cost-effectiveness ratios (ICERs) and calculated as the cost per quality-adjusted life years (QALYs). The willingness-to-pay (WTP) threshold was set as $18,625/QALY. Only direct medical costs were considered. Sensitivity analyses and subgroup analyses were performed to evaluate the robustness of the model. In the base-case analysis, the incremental cost and effectiveness associated with TIS+Chemo vs Chemo was 7,361 and 0.38 QALYs, respectively, leading to an ICER of 19,371/QALY. At the WTP threshold of $18,625/QALY, the TIS+Chemo was not a cost-effective first-line treatment option. The model outcomes were robust. TIS+Chemo did not provide a cost-effective approach for PD-L1 positive advanced GC/GEJC in China setting. However, TIS+Chemo might be cost-effective in provinces with higher WTP threshold. RATIONALE 305, www.clinicaltrials.gov, identifier is NCT03777657.
DOI: 10.25919/gtts-8w11
title: Parkes pulsar observations with undefined project IDs for 2024APRS_68

description: Parkes pulsar observations with undefined project IDs for 2024APRS. This collection contains observations from project ID PX127.
DOI: 10.15468/dl.b4eqx9
title: Occurrence Download

description: A dataset containing 326086 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Estonian Nature Observations Database"
 ]
}

 The dataset includes 326086 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115850-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13505931
title: IAM_COMPACT_Open_access_models_for_case_study_countries_datasets

description: This dataset contains the excel files with all required input data to run OSeMOSYS model for Ukraine, CLEWs model for Kenya, Sri Lanka, and Ethiopia, and OnSSET model model for Ethiopia. Model factsheets, their scope and structure as well as preliminary results are documented in D6.7 - Open-access models for case-study countries (link). The dataset also features zip files that can be run following the instructions on the report for each model. 

The preliminary versions of each model were created as part of the capacity development activities of IAM COMPACT Horizon Europe project.
DOI: 10.25919/dhhh-3q05
title: Parkes observations for project P1328 semester 2024APRS_18

description: Fast radio bursts are peculiar micro-millisecond duration transients, which have been seen to be extragalactic in origin. Since their discovery, a dichotomy has emerged in their population. Some FRBs have been seen to be repeating, while others have not been seen to be repeating. The repeating FRBs, such as FRB 20180301A, provide an unparalleled window into their circumburst environment due to their repeating nature, which can be used to constrain possible progenitor models and test underlying emission mechanisms. Additionally, FRB 20180301A has been seen to have interesting polarisation properties, such as a switch in the sign of RM, indicating a reversal in the magnetic field and a marked reduction in the linear polarisation fraction towards lower frequencies (depolarisation). The previous Parkes/Murriyang source follow-up has also revealed a temporal evolution in the dispersion measure (DM) of the source and tentative evidence for correlation in the DM and rotation measure (RM). The ultra-wideband low (UWL) receiver on Parkes/Murriyang is ideally suited to explore the wideband spectro-temporal and polarimetric behaviour of the source. We propose regular monitoring of FRB 20180301A using UWL to model the magnetic field evolution, study its circumburst media using depolarisation behaviour, and constrain any correlation of DM and RM.
DOI: 10.15468/dl.ty3hyf
title: Occurrence Download

description: A dataset containing 115149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aedes albopictus (Skuse, 1894)"
 ]
}

 The dataset includes 115149 records from 161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115859-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25430/researchdata.cab.unipd.it.00001356
title: Data for "Nanometer-scale acoustic wave packets generated by stochastic core-level photoionization events"

description: Data for the article "Nanometer-scale acoustic wave packets generated by stochastic core-level photoionization events". Also included are the Python scripts to reproduce all figures presented in the article.
DOI: 10.25919/8f1f-5h73
title: Parkes observations for project P1328 semester 2024APRS_19

description: Fast radio bursts are peculiar micro-millisecond duration transients, which have been seen to be extragalactic in origin. Since their discovery, a dichotomy has emerged in their population. Some FRBs have been seen to be repeating, while others have not been seen to be repeating. The repeating FRBs, such as FRB 20180301A, provide an unparalleled window into their circumburst environment due to their repeating nature, which can be used to constrain possible progenitor models and test underlying emission mechanisms. Additionally, FRB 20180301A has been seen to have interesting polarisation properties, such as a switch in the sign of RM, indicating a reversal in the magnetic field and a marked reduction in the linear polarisation fraction towards lower frequencies (depolarisation). The previous Parkes/Murriyang source follow-up has also revealed a temporal evolution in the dispersion measure (DM) of the source and tentative evidence for correlation in the DM and rotation measure (RM). The ultra-wideband low (UWL) receiver on Parkes/Murriyang is ideally suited to explore the wideband spectro-temporal and polarimetric behaviour of the source. We propose regular monitoring of FRB 20180301A using UWL to model the magnetic field evolution, study its circumburst media using depolarisation behaviour, and constrain any correlation of DM and RM.
DOI: 10.15468/dl.8bnkee
title: Occurrence Download

description: A dataset containing 342814 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Latvia)",
 "BasisOfRecord is one of (Observation, Human Observation, Material sample, Literature Occurrence, Specimen, Unknown evidence, Machine Observation)",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2020",
 "HasCoordinate is true"
 ]
}

 The dataset includes 342814 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115861-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5mhckd
title: Occurrence Download

description: A dataset containing 7452 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ocimum basilicum L."
 ]
}

 The dataset includes 7452 records from 568 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115873-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13683301
title: Mpemba effects in open nonequilibrium quantum systems

description: We provide the raw data used to produce Fig.3 and Fig.4 of our paper "Mpemba effects in open nonequilibrium quantum systems " and Fig.1 and Fig.5 of the Supplemental Material.
DOI: 10.5281/zenodo.13683302
title: Mpemba effects in open nonequilibrium quantum systems

description: We provide the raw data used to produce Fig.3 and Fig.4 of our paper "Mpemba effects in open nonequilibrium quantum systems " and Fig.1 and Fig.5 of the Supplemental Material.
DOI: 10.15468/dl.w22btq
title: Occurrence Download

description: A dataset containing 5166 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Impatiens balsamina L."
 ]
}

 The dataset includes 5166 records from 405 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115874-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5284/1122721
title: Data from a Magnetometer Survey at Pitstock Solar Farm, Pitstock Road, Rodmersham, Kent, November 2023

description: This collection comprises raw and processed data from a magnetometer survey carried out at Pitstock Solar Farm, Pitstock Road, Rodmersham, Kent by MOLA Northampton in November 2023.
DOI: 10.6084/m9.figshare.26935750.v1
title: Supplementary Material for: Comparison of Machine Learning Algorithms and Nomogram Construction for Diabetic Retinopathy Prediction in Type-2 Diabetes Mellitus Patients

description: Introduction: To compare various machine learning algorithms for constructing a diabetic retinopathy (DR) prediction model among type 2 diabetes mellitus (DM) patients and to develop a nomogram based on the best model.
Methods: This cross-sectional study included DM patients receiving routine DR screening. Patients were randomly divided into training (244) and validation (105) sets. Least absolute shrinkage and selection operator regression was used for the selection of clinical characteristics. Six machine learning algorithms were compared: decision tree (DT), k-nearest neighbours (KNN), logistic regression model (LM), random forest (RF), support vector machine (SVM), and XGBoost (XGB). Model performance was assessed via receiver operating characteristic (ROC), calibration, and decision curve analyses (DCAs). A nomogram was then developed on the basis of the best model.
Results: Compared with the five other machine learning algorithms (DT, KNN, RF, SVM, and XGB), the LM demonstrated the highest area under the ROC curve (AUC, 0.894) and recall (0.92) in the validation set. Additionally, the calibration curves and DCA results were relatively favourable. Disease duration, DPN, insulin dosage, urinary protein, and ALB were included in the LM. The nomogram exhibited robust discrimination (AUC: 0.856 in the training set and 0.868 in the validation set), calibration, and clinical applicability across the two datasets after 1,000 bootstraps.
Conclusions: Among the six different machine learning algorithms, the LM algorithm demonstrated the best performance. A logistic regression-based nomogram for predicting DR in type-2 DM patients was established. This nomogram may serve as a valuable tool for DR detection, facilitating timely treatment.
DOI: 10.25318/4110006401-eng
title: Regular child care use and reasons for not using child care, First Nations people living off reserve, Métis and Inuit, aged 1 to 5 years

description: Regular child care use and reasons for not using child care, First Nations people living off reserve, Métis and Inuit, aged 1 to 5 years, by gender, Canada, provinces and territories.
DOI: 10.5281/zenodo.10277510
title: Identification and quantification of transposable element transcripts using Long-Read RNA-seq in Drosophila germline tissues - Processed Data, Scripts & Supplementary Material

description: This deposit contains the processed data (.bam files) for the preprint https://doi.org/10.1101/2023.05.27.542554Scripts to produce these files, as well as genome and annotations to explore this data in IGV are available at https://gitlab.inria.fr/erable/te_long_read. A release of this git repository at the date of the publication of the paper in Peer Community Journal is also available in this zenodo deposit.So are the supplementary tables and figures associated to the paper.Raw fastq files are available at the BioProject PRJNA956863
DOI: 10.5281/zenodo.10277511
title: Identification and quantification of transposable element transcripts using Long-Read RNA-seq in Drosophila germline tissues - Processed Data

description: This deposit contains the processed data (.bam files) for the preprint https://doi.org/10.1101/2023.05.27.542554Scripts to produce these files, as well as genome and annotations to explore this data in IGV are available at https://gitlab.inria.fr/erable/te_long_read.Raw fastq files are available at the BioProject PRJNA956863
DOI: 10.5281/zenodo.13682392
title: Identification and quantification of transposable element transcripts using Long-Read RNA-seq in Drosophila germline tissues - Processed Data, Scripts & Supplementary Material

description: This deposit contains the processed data (.bam files) for the preprint https://doi.org/10.1101/2023.05.27.542554Scripts to produce these files, as well as genome and annotations to explore this data in IGV are available at https://gitlab.inria.fr/erable/te_long_read. A release of this git repository at the date of the publication of the paper in Peer Community Journal is also available in this zenodo deposit.So are the supplementary tables and figures associated to the paper.Raw fastq files are available at the BioProject PRJNA956863
DOI: 10.15468/dl.wa3w5y
title: Occurrence Download

description: A dataset containing 20655 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oenothera parviflora L."
 ]
}

 The dataset includes 20655 records from 351 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115875-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dheyj1
title: Occurrence Download

description: A dataset containing 370 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "TaxonKey is Ochrosia poweri F.M.Bailey"
 ]
}

 The dataset includes 370 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000458-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fwqtm3
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Greece",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Calamagrostis epigejos (L.) Roth"
 ]
}

 The dataset includes 48 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180506-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7yh5b
title: Occurrence Download

description: A dataset containing 10189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ruppia tuberosa J.S.Davis & Toml., Saccharum ravennae (L.) L., Saccharum spontaneum L., Sacciolepis africana C.E.Hubb. & Snowden, Sacciolepis angustissima (Hochst. ex Steud.) Kuhlm., Sacciolepis indica (L.) Chase, Sacciolepis myuros (Lam.) Chase, Sacciolepis otachyrioides Judz., Sacciolepis striata (L.) Nash, Sacciolepis vilvoides (Trin.) Chase, Sagittaria aginashii Makino, Sagittaria ambigua J.G.Sm., Sagittaria australis (J.G.Sm.) Small, Sagittaria brevirostra Mack. & Bush, Sagittaria cristata Engelm., Sagittaria cuneata E.Sheld., Sagittaria demersa J.G.Sm., Sagittaria engelmanniana J.G.Sm., Sagittaria fasciculata E.O.Beal, Sagittaria filiformis J.G.Sm.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation, Literature Occurrence, Material sample, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 10189 records from 292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192064-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0ri4ip
title: Occurrence Download

description: A dataset containing 304 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Viburnum prunifolium L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada"
 ]
 }
 ]
}

 The dataset includes 304 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000459-150204170955391/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6tnfwd
title: Occurrence Download

description: A dataset containing 2760 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Schoenoplectus americanus (Pers.) Volkart, Schoenoplectus californicus (C.A.Mey.) Soják, Schoenoplectus confusus (N.E.Br.) Lye)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation, Literature Occurrence, Material sample, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 2760 records from 157 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192074-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.