cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/kykwmjmpgf.3
title: Laboratory acoustic emission experiments on a slider-model

description: The dataset is compiled of the data obtained in laboratory experiments at the geomechanical test bench in the Sadovsky Institute for Dynamics of Geospheres of Russian Academy of Sciences. The experiments were devoted to investigating acoustic emission (AE), accompanying the evolution of a simulated gouge-filled fault. Deformation experiments were performed on a slider model setup with a precise control of mechanical parameters and monitoring the acoustic signal in the frequency band of 20-80 kHz. We used a threshold algorithm to detect AEs. The fault model was simulated by an interface beneath a granite block located on a granite rod 2.5 m long. The size of moveable block was 8×8×4.5 cm, the mass – 0.8 kg. The contact between rough surfaces of the block and the rod was filled with a layer of granular material 3 mm thick. We realized the entire spectrum of slip modes by changing composition of the filler and its particle size distribution. The moveable block slid along the interface under the applied normal and shear forces. The normal stress was 80kPa. The shear stress was applied to the block through an elastic element. Its free end was pulled at a constant velocity of 8 μm/s. The displacement of the block relative to the base was measured with the laser sensor ILD2220-10 (Micro-Epsilon, Germany) in the frequency band of 0-5kHz, accurate to 0.1 μm. The AE sensors were VS30-V (Vallen System, Germany). The operational frequency band was 20–80 kHz. The acoustic signal was processed by AEP5 charge amplifiers and acquired at the sample rate of 1 MHz by the 14-bit analog-to-digital converter E20-10 (L-Card, Russia). The signal is provided in units of voltage. The dataset includes: (i) time series of AEs parameters [time (s), duration (s), energy (a.u.), amplitude As (V), peak-to-peak amplitude ΔA(V), waveform index (a.u.)]; (ii) displacement of the block [time (s), displacement (mm)]; (iii) list of fault fillers used in the experiments.
DOI: 10.17632/26r3spc926.1
title: Original data of LDB

description: This file includes the orginial datasets of grain size and organic geochemical composition for the surficial sediments collected in the Lingding Bay of Pearl River Delta in December, 2016 and August, 2017.
DOI: 10.17632/vc5cm7tg3c.2
title: Original CT data for the paper "The Interface Evolution during Methane Hydrate Dissociation within quartzitic sands and Its Implications to the Permeability Prediction based on NMR data"

description: The given is the original CT data for Sample 1, Sample 2, and Sample 3 which supports the findings in the paper "The Surface Evolution During the Methane Hydrate Dissociation and Its Implications for the NMR-Based Property Predictions".
DOI: 10.5281/zenodo.4382211
title: A spatiotemporal reconstruction of daily ambient temperature using satellite data in the Megalopolis of Central Mexico from 2003–2019

description: In this project, "A spatiotemporal reconstruction of daily ambient temperature using satellite data in the Megalopolis of Central Mexico from 2003–2019", we built a model to predict the mean, maximum, and minimum temperature on each day at each square in a 1-km grid for an area around Mexico City. See the README at https://github.com/justlab/Mexico_temperature/blob/master/README.rst for more information and instructions.
DOI: 10.17632/yphm77tg24.1
title: Dataset - chemokines, cytokines, and biomarkers in the saliva of children with Sjögren’s syndrome

description: INTRODUCTION Sjögren’s syndrome can occur in children. While the concentrations of chemokines, cytokines, and biomarkers (CCBMs) are reported in the saliva of adults with Sjögren’s syndrome, this data is not known in the saliva of children with Sjögren’s syndrome. We hypothesized that CCBMs associated with lymphocyte and mononuclear cell functions were present in the saliva of children with Sjögren’s syndrome. This dataset is associated with 2 studies recently published by Gomez Hernandez et al. A distinguishing profile of chemokines, cytokines, and biomarkers in the saliva of children with Sjögren’s syndrome. Rheumatology (accepted January 17, 2021) and Hikkaduwa Withanage et al. Dataset - chemokines, cytokines, and biomarkers in the saliva of children with Sjögren’s syndrome. Data in Brief (submitted January 17, 2021). METHODS Saliva was collected from 11 children diagnosed with Sjögren’s syndrome and 16 normal healthy children. The presence and concentrations of 105 CCBMs (pg/ml) were determined using multiplex fluorescent microparticle-based immunoassays. CCBM concentrations were interpolated from their MFI values using five parameter logistic curves created from the standard concentrations and their respective MFI readings using xPonent v3.1 software (Luminex, Austin, TX) or using Milliplex Analyst v5.1 software (EMD Millipore, Billerica, MA). Occasionally, there were CCBM concentrations below the standard curve. These concentrations were extrapolated from their MFI values using curves created from zero concentration to the lowest standard concentration and their respective MFI readings. For example, CCL27 concentrations in saliva were below the standard curve. After extrapolation, the mean (standard error of the mean), minimum - maximum values were 4.6 (0.8), 1.7-9.7 pg/ml for children with Sjögrens syndrome and 2.6 (0.3), 0.6-5.8 pg/ml for normal healthy children. There were also CCBM concentrations above the standard curve. These concentrations were extrapolated from their MFI values using curves extended beyond the highest concentration and their respective MFI readings. For example, B2M concentrations in saliva were above the standard curve. After extrapolation, the mean (standard error of the mean), minimum - maximum values were 122,671.6 (14,485.0), 98,850.0-266,527.2 pg/ml for children with Sjögrens syndrome and 98,060.6 (6,038.4), 9,110.0-111,270.0 pg/ml for normal healthy children. RESULTS 43/105 of CCBMs were significantly different between these 2 groups and 71/105 CCBMs were not. The 43 CCBMs were associated with leukocyte chemotaxis, migration, proliferation, and regulation of T-cell activation. CONCLUSION This dataset is among the first to report the concentrations of CCMBs in the saliva of children with Sjögren’s syndrome. It will assist others in their work to understand the etiopathogenesis of Sjögren’s syndrome in children, and assist in the identification of early markers of disease in children.
DOI: 10.17632/f7xnz3ns84.1
title: High-fiber Diet Mitigates Maternal Obesity-induced Cognitive and Social Dysfunction in the Offspring via Gut-brain Axis

description: Maternal obesity has been reported to be related to neurodevelopmental disorders in the offspring. However, the underlying mechanisms and effective interventions remain unclear. The present cross-sectional study with 778 children aged 7 to 14 years in two cities in China indicated that maternal obesity is strongly associated with children’s lower cognition and sociality. Moreover, it has been demonstrated that maternal obesity in mice disrupted the behavior and gut microbiome in offspring, both of which were restored by a high-fiber diet in either dams or offspring. Co-housing and feces microbiota transplantation experiments revealed a causal relationship between microbiota and behavioral changes. Moreover, treatment with the microbiota-derived short-chain fatty acids also alleviated the behavioral deficits in the offspring of obese dams. Together, our study indicated that the microbiota-metabolites-brain axis may underlie maternal obesity-induced cognitive and social dysfunctions, and that high dietary fiber intake could be a promising intervention.
DOI: 10.17632/r8t7ykxknm.1
title: LINF_070007400

description: hypothetical protein - conserved; Leishmania infantum
DOI: 10.17632/fgh2kxxsnm.1
title: LINF_070007500

description: Fe-S cluster assembly protein DRE2; Leishmania infantum
DOI: 10.17632/byww6nrp2z.1
title: FTIR Spectroscopy (2500-4000 nm) dataset for adulteration coconut milk

description: This dataset results from measurements using FTIR Spectroscopy at a wavelength of 2500-4000 nm on a coconut milk sample. Infrared spectral data of coconut milk ware acquired using a compact FTIR instrument (Bruker alpha II). FTIR Spectra data and adulteration coconut milk were collected at the Research Center for Appropriate Technology, Indonesian Institute of Sciences (LIPI), Subang, Indonesia
DOI: 10.17632/3ttjtyhzz2.1
title: Suprachiasmatic-controlled entry of glucose into the arcuate nucleus determines the rhythm in blood glycemia

description: The central biological clock, the suprachiasmatic nucleus (SCN), synchronizes behavior and physiological processes with the daily light/dark cycle to prepare the body optimally for the coming rest/activity period. According to the time of the day, the SCN establishes different set-points for some hormones and circulating metabolites. These set-points are adjusted to emergent conditions such as fasting, sickness, or stress (Mrosovsky, 1990). This subtle modulation of set-points is a result of a daily modulation of the sensitivity of various sensory structures (Buijs et al., 2019). For example, glucose levels and temperature oscillate with a higher amplitude when animals fast, with lower values at the beginning of the sleep phase (Zeitgeber Time (ZT) 2 in rodents), but reaching the same acrophase as an ad libitum animal just before the active period (ZT11 in rodents) (La Fleur et al., 1999; Liu et al., 2002). The arcuate nucleus (ARC) is essential for these processes detecting peripheral concentrations of hormones, metabolites, and glucose, thanks to its strategic position in the hypothalamus, next to the median eminence (ME), a circumventricular organ lacking of the blood-brain barrier with fenestrated capillaries (Ciofi, 2011; Rodríguez et al., 2010). The first-order neurons within the ARC are then allowed to rapidly detect peripheral signals (Faouzi et al., 2007; Fioramonti et al., 2007; Leon-Mercado et al., 2017; Parton et al., 2007; Schaeffer et al., 2013; Zhang and Van Den Pol, 2016). The control of corticosterone secretion exemplifies the importance of rapidly detecting blood-borne molecules by the ARC for regulatory processes. ARC neurons sense corticosterone providing a fast negative feedback to modify its secretion depending on the time of the day (Leon-Mercado et al., 2017). We hypothesized that circadian regulation of glucose levels follows a similar concept, whereby direct projections from the SCN to the ARC modify glucose sensing in the ARC throughout the day, thereby modulating peripheral glucose levels in a circadian manner. Based on that hypothesis, experiments were done in Wistar rats, and the raw data is available here. You can find pictures of permeability essays in the ARC, using Evans Blue, pictures from fluorescent immunohistochemistry showing differences in the morphology of the ME-ARC barrier, as well as in the content of GLUT-1. You can also find the raw data of the glycemia values in several conditions such as after receiving icv injections of GLUT-1 blocker, VP antagonist, and their respective control groups. Here you also have access to the statistic tests performed in each case. For details of each picture and a more elaborated description, please see the complete.
DOI: 10.17632/w8h74c6hsy.2
title: Supplementary Data on the Docking of Phytoconstituents of Betel Leaf on SARS-CoV-2

description: Data on the Docking of Phytoconstituents of Betel Leaf on SARS-CoV-2
DOI: 10.17632/rvvfzzkgcc.1
title: LINF_070005900

description: methionine synthase; Leishmania infantum
DOI: 10.17632/dty949fjnx.1
title: LINF_070006000

description: metallo-peptidase - Clan ME - Family M16C; Leishmania infantum
DOI: 10.17632/v9r435dx4c.1
title: LINF_070007100

description: protein phosphatase 2A - regulatory subunit B; Leishmania infantum
DOI: 10.17632/rbf253zv3j.1
title: Entrepreneurial readiness of agrigraduates in India

description: The dataset describes entrepreneurial readiness and personal determinants of agricultural graduates in the Indian context.
DOI: 10.17632/6ykgyk985w.1
title: original data for RIG-I paper

description: original data for "JMJD4-demethylated RIG-I prevents hepatic steatosis and carcinogenesis"
DOI: 10.17632/v68hy8jk93.1
title: Experimental Analysis of a Land Assembly Mechanism

description: The data contains observations of bidding behavior from a laboratory experiment conducted at the Delhi School of Economics and Indraprastha Institute of Information Technology, Delhi. The primary objective was to test the efficiency performance of a proposed mechanism in addressing the holdout problem in land assembly.
DOI: 10.17632/cvh88nd63f.1
title: Quality of college life of RSU dental students

description: The spss file in the article named Quality of college life of RSU dental students
DOI: 10.5281/zenodo.4449981
title: Risk Communication and Community Engagement: A Ghanaian Perspective

description: Risk communication and community engagement is essential component of health emergency preparedness and response action. Dataset encompasses responses from all the sixteen (16) administrative regions of Ghana. Responses to risky behaviors, perceived probability of covid-19 infection, sources of information, perceived severity etc. are well captured by the dataset.
DOI: 10.17632/ym9mcsm2fg.1
title: Anti-leukemic properties of aplysinopsin derivative EE-84 alone and in combination with BH3 mimetic A-1210477 (3)

description: Aplysinopsins are a class of marine indole alkaloids that exhibit a wide range of biological activities such as prevention of neoplastic growth on an array of different cancer cell lines. Although both the indole and N-benzyl moieties of aplysinopsins are known to possess anti-proliferative activity against cancer cells, their mechanism of action remains unclear. Through in vitro and in vivo proliferation and viability screening of newly synthesized aplysinopsin analogs on myelogenous leukemia cell lines and zebrafish toxicity tests as well as analysis of differential toxicity in non-cancerous RPMI 1788 cells and PBMCs, we identified EE-84 as a promising novel drug candidate against myeloid leukemia. This indole derivative demonstrated drug-likeness in agreement with Lipinski’s rule of five and was responsible for the senescent-like phenotype in K562 cells in line with its cytostatic effect. EE-84-treated K562 cells likewise underwent morphological changes suggesting mitochondrial dysfunction, autophagy and ER stress as cellular stress responses. Finally, we demonstrated the synergistic cytotoxic effect of EE-84 with a BH3 mimetic, the Mcl-1 inhibitor (A-1210477), against K562 and K562IR cells, highlighting the inhibition of anti-apoptotic Bcl-2 proteins as a promising therapeutic approach against chronic myeloid leukemia.
DOI: 10.5281/zenodo.4449980
title: Risk Communication and Community Engagement: A Ghanaian Perspective

description: Risk communication and community engagement is essential component of health emergency preparedness and response action. Dataset encompasses responses from all the sixteen (16) administrative regions of Ghana. Responses to risky behaviors, perceived probability of covid-19 infection, sources of information, perceived severity etc. are well captured by the dataset.
DOI: 10.17632/8xwbvjbvmk.1
title: Global invasion risk of Apocephalus borealis, a honey bee parasitoid
DOI: 10.17632/v8d9hfk84b.1
title: VRT_ physical activity and subjective dizziness

description: Dataset VRT_ physical activity and subjective dizziness
DOI: 10.17632/5mwh636vnf.1
title: Two-component spike nanoparticle vaccine protects macaques from SARS-CoV-2 infection. Brouwer, et al.

description: Table S3. Viral variants identified by viral sequencing in control and vaccinated cynomolgus macaques after challenge, related to figure 6.
DOI: 10.17632/87cz6zrhst.1
title: Barriers to the application of physical assessment skills

description: 1. Research hypothesis:- i) There is no correlation between nurses' characteristics and the barriers perceived in application of physical assessment skills ii) There is no correlation between perceived barriers and the application of physical assessment skills by critical-care nurses 2. This dataset consists of:- i) Characteristics data of nurses, ii) Frequency of applied physical assessment skills, iii) Physical assessment time occurrence iv) Scores of barriers perceived in application of physical assessment skills, there were 7 subscales:- a) Reliance on others and technology b) Lack of time and interruptions c) Ward culture d) Lack of confidence e) Lack of nursing role models f) Lack of influence on patient care g) Specialty area 3. This data was interpreted as follow:- i) The characteristics of nurses was descriptively analyzed ii) The frequency of applied physical assessment skills was summed in obtaining the total score of each skills iii) The 7 subscales of perceived barriers were analyzed by calculating the median score then analyzed by using Spearman rho to find the correlation with the applied physical assessment skills
DOI: 10.17632/39syymgxs9.1
title: Data for Neolithic Leadership: A Surprising Link between the Prehistoric Culture of Vinča and the Modern Covid-19 Pandemic

description: SPSS output data for Neolithic Leadership: A Surprising Link between the Prehistoric Culture of Vinča and the Modern Covid-19 Pandemic
DOI: 10.17632/b3h99pwybf.2
title: The expert-level distinction of systemic sclerosis from hand photographs using the deep convolutional neural network

description: Supplement Table 1. The diseases types of patients included in this study. Supplement Figure 1. Photography equipment and hand photographs. Photographs of the patient's hands were taken using the imaging equipment set up in the room dedicated to photography, with a constant light source, camera settings, and distance between the hand and camera (A). We took four hand photographs: palms of right hands (B), palms of left hands (C), dorsum of right hands (D), and dorsum of left hands (E) by each patient. Photographs of representative SSc patients were shown. Supplement Figure 2. The architecture of the CNN. The architecture of the CNN developed in this study was shown. The CNN was built in an Nvidia V100 environment, using Tensorflow 1.13.2 and Keras 2.2.4 as frameworks. Each of palm and dorsal of hand photographs obtained from the patients was randomly and evenly divided into four groups. Three of these groups were used to build and train the CNN. The remaining one group was used to compare the SSc distinction performance of SSc specialists with the CNN after training. SSc patient's photos LSc patient's photos SLE patient's photos DM patient's photos Vasculitis patient's photos Early SSc patient's photos Healthy Control's photos
DOI: 10.17632/5ptks9t6b7.4
title: CGP violacein treatment Vs. control

description: A collection of ~6000 heterozygous yeast strains, was treated with sublethal doses of violacein or vehicle treated control for 10 generations in a way to identify violacein-induced happloinsufficiency profile. Each strain had one copy of each of the predicted S. cerevisiae open reading frame (ORF) replaced by an antibiotic resistance marker (KANMX4) flanked by 20 bp DNA sequences (barcodes), allowing quantitative analysis of differential growth through barcode sequencing. This dataset shows barcodes counts, and DESeq2 analysis showing barcodes that were differentially expressed in the comparisons between violacein treatment and vehicle treated control. We considered as hits, strains that were most affected by violacein treatment, ajusted p-value &lt;0.01 and log2 fold change &lt;0.
DOI: 10.17632/6pkcy497v7.2
title: Barcode counts for heterozygous yeast for genes related to the chaperone system

description: Haploinsufficiency Chemical Genomic Profiling (HIP) approach is based on the premise that yeast containing a gene expressed in heterozygosis will become hypersensitive to an inhibitor targeting the product of this gene. Here we treated a pool containing ~6000 heterozygous yeast strains with sublethal doses of violacein or vehicle control for further barcode counts comparisson. The BioProject accession number of the SRA database generated from this work is PRJNA689872. In order to guarantee reproducibility of our results, all the code we used to process the data is available in a public databank (https://zenodo.org/record/4443837).
DOI: 10.17632/7xvcn36743.1
title: Social Capital and the Shadow Economy

description: In this work, we look at the relationship between social capital, measured by generalized trust, and the size of the shadow economy, an institutional characteristic which reflects the inability of a society to successfully cooperate. An inverse relation arises, in a cross-country sample. Using several instruments, and especially a linguistic rule, we overcome endogeneity concerns and try to establish a causal relation arising from trust. Findings (1) suggest a 1 percentage point increase in trust (the share of trusting population) reduces the shadow economy by almost half a percentage point of GDP, (2) indicate a decreasing marginal effect of trust over the shadow economy. Overall, (3) these results further motivate low-medium trust countries to invest in policies aiming at increasing trust
DOI: 10.17632/75sxs2ccgn.1
title: DAA + TEOS: Inhibition of swelling clays and consolidation of Itararé Sandstone, constituent of the facade of the Municipal Theater of São Paulo, Brazil

description: dataset of the article thar works on daa pre-tratament and TEOS tratament
DOI: 10.17632/6tfmvtm43g.1
title: LINF_360046500

description: 60S ribosomal protein L10a; Leishmania infantum
DOI: 10.17632/rtv6wttrmm.1
title: LINF_180011500

description: 60S ribosomal protein L10a; Leishmania infantum
DOI: 10.17632/4tc8x2nwz6.1
title: The potential distribution of four tick species in China under climate and land-use change

description: Four representative tick species including Dermacentor marginatus (distributed in northwestern and central China), Dermacentor silvarum (distributed in northeastern and central China), Haemaphysalis longicornis (distributed in central and east China) and Ixodes granulatus (distributed in southern China) are selected as they have different regional distribution foci in mainland China. We used the MaxEnt model to identify the key environmental factors of tick occurrence and map the potential distribution of them in the 2050s under four combined climate and socioeconomic scenarios (i.e., SSP1-RCP2.6, SSP2-RCP4.5, SSP3-RCP7.0 and SSP5-RCP8.5).
DOI: 10.13145/bacdive111836.20191129.4.1
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive111837.20191129.4.1
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive111838.20191129.4.1
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive111839.20191129.4.1
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive111840.20191129.4.1
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive111841.20191129.4.1
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive111842.20191129.4.1
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.