cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7294/14501640
title: Building a 3D Data Preservation Model for Cross-Disciplinary Use - Web Survey

description: This dataset is a collection of web survey responses on 3D curation and digital preservation workflows. This survey was approved by Virginia Tech IRB (VT-IRB 20-479) in 2020 and distributed for 3 months to digital preservation, 3D curation, and other related audiences. The questions were optional, largely open-ended, and designed for a narrative response. <br>Numerous disciplines are producing 3D and virtual reality (VR) data but without the guidance of published standards. While some methods for curating 3D data have emerged, and while there are data sets available for specific disciplines, this is a dynamic area of study and there are few practices that are widely used across disciplines. The purpose of this study is to survey researchers working with, producing, and/or preserving 3D data on their methods for documenting their 3D production and preservation workflows, and their level of preservation planning. This will inform the Digital Imaging & Preservation Services department to develop a workflow for preserving 3D and Virtual Reality (VR) data.<br><br>We also conducted a multi-case study uses data sets created for research and education at Virginia Tech from 2019-2020. The study uses three data samples, each created with different modalities. As an initial study, our approach to the topic was to describe the curation activities we complete on these data sets and then provide reflections to inform the work of the wider research data management community through the lessons that we learn. <br><br>Through the case study interviews and test cases and the wider survey, we gained valuable information that has informed our decisions in what metadata and steps we will preserve in this project. Our final file format, metadata schema, strategy for collecting provenance and technical information, and documenting project context have been further defined. The project to which we are applying these design considerations is the photogrammetry of entomology specimens from the Virginia Tech Insect Collection, and will expand to a broader 3D curation program.<br>
DOI: 10.3886/icpsr38017.v1
title: Annual Survey of Jails in Indian Country, 2017
title: Version 1

description: The purpose of the Survey of Jails in Indian Country is an enumeration of all known adult and juvenile facilities -- jails, confinement facilities, detention centers, and other correctional facilities operated by tribal authorities or the Bureau of Indian Affairs (BIA), U.S. Department of the Interior. For the purpose of this collection, Indian country includes reservations, pueblos, rancherias, and other Native American and Alaska Native communities throughout the United States. The survey collects data on the number of adults and juveniles held on the last weekday in June 2017, type of offense, average daily population in June, most crowded day in June, admissions and releases in June, number of inmate deaths and suicide attempts, rated capacity, and jail staffing.
description: None.
description: Datasets: DS1: Annual Survey of Jails in Indian Country, 2017
description: Adult and juvenile facilities -- jails, confinement facilities, detention centers, and other correctional facilities in Indian country operated by tribal authorities or the Bureau of Indian Affairs (BIA), U.S. Department of the Interior in the United States in 2017. Smallest Geographic Unit: City
description: self-enumerated questionnaire; telephone interview
DOI: 10.5281/zenodo.4679467
title: BIRDy_Experiment_Results_MDPI

description: Supplementary material of the paper "Inertial Parameter Identification in Robotics: A Survey" This repository contains the raw experiment data and results related to our paper.
DOI: 10.5281/zenodo.4679466
title: BIRDy_Experiment_Results_MDPI

description: Supplementary material of the paper "Inertial Parameter Identification in Robotics: A Survey" This repository contains the raw experiment data and results related to our paper.
DOI: 10.6084/m9.figshare.14510913
title: CASF-2016 dataset prepared for DeepDock evaluation

description: CASF-2016 data used to evaluate DeepDock. The file contains information of 285 protein ligand complexes extracted from CASF-2016. They have been preprocessed using MaSSIF and are ready to be used as input using Pytorch geometric. The target is represented by a mesh, each node contains 4 physchem properties. The ligand is represented as a 2D graph where node features represent atom type and edge features represent bond types.
DOI: 10.6084/m9.figshare.14510847
title: DeepDock training dataset

description: Data set used to train and evaluate DeepDock. The file contains information of ~16K protein ligand complexes extracted from the general set of PDBbind database v2019. They have been preprocessed using MaSSIF and are ready to be used as input using Pytorch geometric. The target is represented by a mesh, each node contains 4 physchem properties. The ligand is represented as a 2D graph where node features represent atom type and edge features represent bond types.
DOI: 10.6084/m9.figshare.14512089.v1
title: Test

description: This is a test
DOI: 10.6084/m9.figshare.14512089
title: Test

description: This is a test
DOI: 10.5281/zenodo.4728094
title: User traveling behaviour series for NY Foursquare users in 2012

description: A <strong>behavioral atom</strong> is a categorical value that describes the user’s interaction with within a time frame from registered traveling activity about the user. A <strong>user travel behavior series</strong> (UTB series) is a sequence of behavioral atoms organized as a time series in chronological order to describe the user’s behavior during the check-in dataset period.
DOI: 10.5281/zenodo.4728093
title: User traveling behaviour series for NY Foursquare users in 2012

description: A <strong>behavioral atom</strong> is a categorical value that describes the user’s interaction with within a time frame from registered traveling activity about the user. A <strong>user travel behavior series</strong> (UTB series) is a sequence of behavioral atoms organized as a time series in chronological order to describe the user’s behavior during the check-in dataset period.
DOI: 10.5281/zenodo.4728084
title: BIRDy_Experiment_Data_MDPI

description: Supplementary material of the paper "Inertial Parameter Identification in Robotics: A Survey" This repository contains the raw experiment data related to our paper.
DOI: 10.25824/redu/ftxzbh
title: (1) Mapa das APP do alto curso da bacia hidrográfica do rio Jaguari.jpg

description: Fonte de dados: Folha topográfica IBGE 1: 50.000 e Imagens Sentinel 2A - 25/07/2020; Referência espacial: Datum SIRGAS 2000 Projeção: UTM Zona 23S Autoria: Natasha M. P Santos Financiamento: FAPESP
DOI: 10.25824/redu/zh3uhf
title: (1a) Mapa das APP do alto curso da bacia hidrográfica do rio Jaguari.tif

description: Fonte de dados: Folhas topográficas IBGE 1:50.000 e Imagens Sentinel 2A - 25/07/2020; Referência espacial: Datum SIRGAS 2000 Projeção: UTM Zona 23S Autoria: Natasha M. P Santos Financiamento: FAPESP
DOI: 10.6084/m9.figshare.14512116
title: DEGs identified in PD blood microarray data

description: Table of differentially expressed genes found in the PD blood dataset.
DOI: 10.6084/m9.figshare.14512116.v1
title: DEGs identified in PD blood microarray data

description: Table of differentially expressed genes found in the PD blood dataset.
DOI: 10.5281/zenodo.4727968
title: Supporting Data and Scripts for "The hierarchical packing of euchromatin domains can be described as multiplicative cascades"

description: File containing the data and scripts underlying the study "The hierarchical packing of euchromatin domains can be described as multiplicative cascades". All data and scripts used to produce the different figure panels are contained in this ZIP-file, sorted into accordingly named directories. An overview readme file explains which scripts need to be run in which sequence to reproduce the presented results.
DOI: 10.5281/zenodo.4727967
title: Supporting Data and Scripts for "The hierarchical packing of euchromatin domains can be described as multiplicative cascades"

description: File containing the data and scripts underlying the study "The hierarchical packing of euchromatin domains can be described as multiplicative cascades". All data and scripts used to produce the different figure panels are contained in this ZIP-file, sorted into accordingly named directories. An overview readme file explains which scripts need to be run in which sequence to reproduce the presented results.
DOI: 10.6084/m9.figshare.13608074
title: Effects of artificial inoculation on trait correlations with resistance to Fusarium ear rot and fumonisin contamination in maize

description: Data files and R scripts used for analysis of maize field experiments comparing Fusarium ear rot and other traits with and without inoculation in S1 line topcrosses. To accompany the paper "Effects of artificial inoculation on trait correlations with resistance to Fusarium ear rot and fumonisin contamination in maize" by Eric Butoto, Thiago Marino, and James Holland. Accepted for Publication at Crop Science, 2021.<br>
DOI: 10.6084/m9.figshare.13608074.v1
title: Effects of artificial inoculation on trait correlations with resistance to Fusarium ear rot and fumonisin contamination in maize

description: Data files and R scripts used for analysis of maize field experiments comparing Fusarium ear rot and other traits with and without inoculation in S1 line topcrosses. To accompany the paper "Effects of artificial inoculation on trait correlations with resistance to Fusarium ear rot and fumonisin contamination in maize" by Eric Butoto, Thiago Marino, and James Holland. Accepted for Publication at Crop Science, 2021.<br>
DOI: 10.25345/c53z50
title: MassIVE MSV000087339 - Palaeoproteomic analyses of dog palaeofaeces reveal a preserved dietary and host digestive proteome
title: The site of Nunalleq has yeilded remarkably well preserved archaeological artefacts, which have provided insight into the lifeways of humans and dogs in pre-contact Alaska. Dietary studies using stable isotopes have revealed a mixed economy relying heavily on aquatic resources, but while similarities between human and dog provisioning are apparent, the broad perspectives provided by stable isotope analysis leaves questions concerning the management of dogs in the past open for interpretation. This dataset was generated to explore the viability of performing palaeoproteomic analyses on palaeofaeces, something which, at the time we started, had yet to be published on, and to explore the short term insights from dog faeces in high resolution using a combination of shotgun proteomics and zooarchaeology by mass spectrometry.
DOI: 10.18739/a22v2cb44
title: Stable water isotope data from Arctic Alaska snow pits in 2019

description: Stable water isotope data from snow stratigraphic layers in Arctic Alaska snow pits. The sampling targeted individual stratigraphic layers in the snow profile characterized by hand hardness test, texture, visual appearance, and density. Snow pit physiographical data for the same snow pits available: Stine Højlund Pedersen, Glen Liston, and Jeffrey Welker. 2019. Snow depth and snow density measured in Arctic Alaska for caribou winter applications in 2018 and 2019. Arctic Data Center. doi:10.18739/A2MS3K24P. Depth-integrated stable water isotope samples were taken from each identified layer using a plastic coring tube. Data were collected between 6 March - 2 April 2019 field campaign within the general wintering range of the Central Arctic caribou Herd (CAH). The data were collected as a part of the National Science Foundation project "Nutritional Landscapes of Arctic Caribou: Observations, Experiments, and Models Provide Process-Level Understanding of Forage Traits and Trajectories". The snow water isotope data was used to to understand the winter moisture origin in Arctic Alaska, and study how post depositional processes modify the snowpack and its isotope stratigraphy.
DOI: 10.5281/zenodo.4728128
title: Behavioral atoms for NY Foursquare users in 2012

description: A <strong>behavioral atom</strong> is a categorical value that describes the user’s interaction with within a time frame from registered traveling activity about the user. The atoms alphabet is made up with 4 elements: 0 (low), 1 (moderate), 2 (average), 3 (high)
DOI: 10.5281/zenodo.4728127
title: Behavioral atoms for NY Foursquare users in 2012

description: A <strong>behavioral atom</strong> is a categorical value that describes the user’s interaction with within a time frame from registered traveling activity about the user. The atoms alphabet is made up with 4 elements: 0 (low), 1 (moderate), 2 (average), 3 (high)
DOI: 10.6084/m9.figshare.14514471
title: Table S1. Occurrence datapoint used in ENM for D. maxima, and Trypanosoma cruzi.

description: <b>Table S1. </b>Occurrence datapoint used in ENM for <i>D. maxima</i>, and <i>Trypanosoma cruzi.</i>
DOI: 10.6084/m9.figshare.14514471.v1
title: Table S1. Occurrence datapoint used in ENM for D. maxima, and Trypanosoma cruzi.

description: <b>Table S1. </b>Occurrence datapoint used in ENM for <i>D. maxima</i>, and <i>Trypanosoma cruzi.</i>
DOI: 10.17608/k6.auckland.11961282
title: Sediment particle velocity and activity during dune migration by Terwisscha van Scheltinga et al. (2021)

description: The data being presented here is described and analyzed in:<br><br>Terwisscha van Scheltinga, R. C., Coco, G., & Friedrich, H. (2021). Sediment particle velocity and activity during dune migration. Water Resources Research, 57, e2020WR029017. https:// doi.org/10.1029/2020WR029017<br><br>1. The article is based on image files recording sediment motion over a submerged bed. Video files summarize the data, and video files of six experimental conditions are available here, with details of the experiment in Table 1 in the paper.<br>- FR031810_L0649 (plane bed)<br>- FR041810_L0649 (plane bed)- FR051515_L0949 (dune bed)<br>- FR051515_L1251 (dune bed)<br>- FR061515_L1649 (dune bed)<br>- FR071515_L1749 (dune bed)<br>The images over dune beds cover different locations and the camera is moved between recordings. Image numbers are given in the top left. <br>In the tables in the Excel file the image numbers for each location and experiment presented are given:<br>2021_WRR_image_numbers_iod_piv_mapping_FR03FR04etc<br>2. The images used for Figure 3 are given in:<br>- fig_3a_e.zip<br>- fig_3f<br>3. The processed data used for figure 5 is organized in rows per experiment in the following file:2021_WRR_plot_Upx_Vp_Fig_5<br>Upx refers the time-averaged particle velocity, Vp is the time-averaged particle activity. Experiment names are according to Table 1 in the paper.<br><br><br>
DOI: 10.17608/k6.auckland.11961282.v1
title: Sediment particle velocity and activity during dune migration by Terwisscha van Scheltinga et al. (2021)

description: The data being presented here is described and analyzed in:<br><br>Terwisscha van Scheltinga, R. C., Coco, G., & Friedrich, H. (2021). Sediment particle velocity and activity during dune migration. Water Resources Research, 57, e2020WR029017. https:// doi.org/10.1029/2020WR029017<br><br>1. The article is based on image files recording sediment motion over a submerged bed. Video files summarize the data, and video files of six experimental conditions are available here, with details of the experiment in Table 1 in the paper.<br>- FR031810_L0649 (plane bed)<br>- FR041810_L0649 (plane bed)- FR051515_L0949 (dune bed)<br>- FR051515_L1251 (dune bed)<br>- FR061515_L1649 (dune bed)<br>- FR071515_L1749 (dune bed)<br>The images over dune beds cover different locations and the camera is moved between recordings. Image numbers are given in the top left. <br>In the tables in the Excel file the image numbers for each location and experiment presented are given:<br>2021_WRR_image_numbers_iod_piv_mapping_FR03FR04etc<br>2. The images used for Figure 3 are given in:<br>- fig_3a_e.zip<br>- fig_3f<br>3. The processed data used for figure 5 is organized in rows per experiment in the following file:2021_WRR_plot_Upx_Vp_Fig_5<br>Upx refers the time-averaged particle velocity, Vp is the time-averaged particle activity. Experiment names are according to Table 1 in the paper.<br><br><br>
DOI: 10.25505/fiz.icsd.cc21vwxq
title: CSD 1902684: Experimental Crystal Structure Determination

description: Related Article: Beate M. Schulz, Thomas Schleid|2019|Z.Krist. - Supplement issues|39|97|
DOI: 10.5517/ccdc.csd.cc26tzfg
title: CCDC 2050756: Experimental Crystal Structure Determination

description: Related Article: Jake Axford, Moo Je Sung, John Manchester, Donovan Chin, Monish Jain, Youngah Shin, Ina Dix, Lawrence G. Hamann, Atwood K. Cheung, Rajeev Sivasankaran, Karin Briner, Natalie A. Dales, Brian Hurley|2021|J.Med.Chem.|64|4744|doi:10.1021/acs.jmedchem.0c02173
DOI: 10.5517/ccdc.csd.cc26tzgh
title: CCDC 2050757: Experimental Crystal Structure Determination

description: Related Article: Jake Axford, Moo Je Sung, John Manchester, Donovan Chin, Monish Jain, Youngah Shin, Ina Dix, Lawrence G. Hamann, Atwood K. Cheung, Rajeev Sivasankaran, Karin Briner, Natalie A. Dales, Brian Hurley|2021|J.Med.Chem.|64|4744|doi:10.1021/acs.jmedchem.0c02173
DOI: 10.5517/ccdc.csd.cc22hf45
title: CCDC 1921446: Experimental Crystal Structure Determination

description: Related Article: Wen jie Kuang, Shao chang Ji, Shen min Xu, Ping Lan, An ping Liao, Ju ying Zhou, Jin yan Zhang|2019|Cryst.Growth Des.|19|6603|doi:10.1021/acs.cgd.9b01028
DOI: 10.5281/zenodo.4728126
title: Replication package for: "Exchange Rate Exposure and Firm Dynamics"

description: This package contains all the code necessary to reproduce figures and tables in Salomao and Varela (forthcoming). "Exchange Rate Exposure and Firm Dynamics" Review of Economic Studies. Instructions are also given about accessing the data.
DOI: 10.5281/zenodo.4725823
title: Busca por novos inibidores da PCSK9 empregando técnicas de planejamento de fármacos baseado na estrutura do alvo

description: O item Simulações.zip contém as trajetórias de todas as simulações (XXX_trj) e as respectivas topologias dos sistemas (XXX-out.cms). Para visualizar as trajetórias é necessário utilizar um software de visualização molecular, tal como Pymol, VMD ou Maestro.
description: São Paulo research foundation (2020/06490-3) Acknowledgment to Desmond Molecular Dynamics System, D. E. Shaw Research, New York, NY.
DOI: 10.5281/zenodo.4725822
title: Busca por novos inibidores da PCSK9 empregando técnicas de planejamento de fármacos baseado na estrutura do alvo

description: O item Simulações.zip contém as trajetórias de todas as simulações (XXX_trj) e as respectivas topologias dos sistemas (XXX-out.cms). Para visualizar as trajetórias é necessário utilizar um software de visualização molecular, tal como Pymol, VMD ou Maestro.
description: São Paulo research foundation (2020/06490-3) Acknowledgment to Desmond Molecular Dynamics System, D. E. Shaw Research, New York, NY.
DOI: 10.5281/zenodo.4701640
title: Dependency Smells in JavaScript Projects

description: This is the replication package for our paper on dependency smells. Here is a short description of what is contained in this package: <strong>Code</strong> This folder contains the code used for extracting, parsing, and analyzing the smells in the dataset, along with statistical analyses. The "parser.py" parses the project information (such as package.json) and prepares them in the databases. The "analyzer.py" file is responsible for the majority of the empirical analyses. <strong>Datasets</strong> This folder contains the intermediate datasets created and used in our analyses. The "smelldataset.db" file contains all smelly and clean dependencies for the latest snapshot. The "smell_counts.csv" file contains smells statistics for the projects in our dataset. The "changehistory.db" file contains the historical smell statistics for a period of 5 years. The code also requires the GhTorrent Dataset available at: https://ghtorrent.org/downloads.html. <strong>Survey Questionnaires and Responses</strong> These two folders contain the full set of questions that we asked the developers in our surveys along with the responses. The responses have been anonymised to hide personal information. <strong>Tool</strong> This is the published tool which is also available at: https://github.com/abbasjavan/DependencySniffer <strong>Visualization Scripts</strong> This folder contains the scripts used to create the figures for the paper.
DOI: 10.5519/qd.bgabv6ki
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1741 records)
DOI: 10.5519/qd.kgijuokc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (67 records)
DOI: 10.3886/e138361
title: Data and Code for: Women in Academic Economics: Have We Made Progress?

description: This project contains the data and code to replicate the tables for the paper, "Women in Academic Economics: Have We Made Progress?” by Donna K. Ginther and Shulamit Kahn.
description: Academic Analytics data for tenure track academics in the fields of economics, biomedical science, physical science, political science, mathematics and statistics, and engineering. .
DOI: 10.3886/e138361v1
title: Data and Code for: Women in Academic Economics: Have We Made Progress?

description: This project contains the data and code to replicate the tables for the paper, "Women in Academic Economics: Have We Made Progress?” by Donna K. Ginther and Shulamit Kahn.
description: Academic Analytics data for tenure track academics in the fields of economics, biomedical science, physical science, political science, mathematics and statistics, and engineering. .
DOI: 10.3886/e130381
title: Data and code for: Ambiguous Air Pollution Effects of China's COVID-19 Lockdown

description: This is data and code accompanying the paper "Ambiguous Air Pollution Effects of China's COVID-19 Lockdown". <br><br>Paper abstract: Reductions in ambient pollution have been suggested as a "silver lining" to the COVID-19 Pandemic. We analyze China's pollution monitor data and account for the large annual improvements in air quality following Lunar New Year (LNY), which essentially coincided with lockdowns. With the exception of NO2, China's air quality improvements in 2020 are smaller than we should expect near the pandemic's epicenter: Hubei province. We see smaller improvements in SO2 than expected while ozone concentrations roughly doubled in Hubei. Similar patterns are found for the six provinces neighboring Hubei. We conclude that COVID-19 had ambiguous impacts on China's air quality. <br>
DOI: 10.3886/e130381v1
title: Data and code for: Ambiguous Air Pollution Effects of China's COVID-19 Lockdown

description: This is data and code accompanying the paper "Ambiguous Air Pollution Effects of China's COVID-19 Lockdown". <br><br>Paper abstract: Reductions in ambient pollution have been suggested as a "silver lining" to the COVID-19 Pandemic. We analyze China's pollution monitor data and account for the large annual improvements in air quality following Lunar New Year (LNY), which essentially coincided with lockdowns. With the exception of NO2, China's air quality improvements in 2020 are smaller than we should expect near the pandemic's epicenter: Hubei province. We see smaller improvements in SO2 than expected while ozone concentrations roughly doubled in Hubei. Similar patterns are found for the six provinces neighboring Hubei. We conclude that COVID-19 had ambiguous impacts on China's air quality. <br>