cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9730100
title: Dating of the upper Stormberg Group: Datasets and Supplementary Materials for the 'Chronostratigraphic framework for the upper Stormberg Group: implications for the Triassic-Jurassic boundary in southern Africa' - Bordy et al. 2020

description: These are supplementary files to a project aimed at reviewing the stratigraphy of the upper Stormberg Group and providing its first chronostratigraphic framework. https://doi.org/10.1016/j.earscirev.2020.103120<br>The available data on Figshare include:(1) Supplement Text 1 - detailed information on the geochronological procedure (additional methods), geochronological results for each sample, and the key to animal and track outlines in Figure 2 (MS Word text file);(2) Supplemental Table S1 - complete data set of geochronological measurements for each sample and standards (MS Excel data file);(3) Supplemental Figure S1 – illustrations, for each sample, of the relative-age-probability plots (or probability density plots; PDP), concordia diagrams, and Isoplot of weighted mean date with 2σ internal error bars.<br><b>Project abstract</b>:The upper Stormberg Group (Elliot and Clarens formations) of the main Karoo Basin is well-known for its fossil vertebrate fauna, comprising early branching members of lineages including mammals, dinosaurs, and testudinates. Despite 150 years of scientific study, the upper Stormberg Group lacks radioisotopic age constraints and remains coarsely dated via imprecise faunal correlations. Here we synthesise previous litho- and magnetostratigraphic studies, and present a comprehensive biostratigraphic review of the upper Stormberg fauna. We also present the results of the first geochronological assessment of the unit across the basin, using U-Pb dates derived from detrital zircons obtained from tuffaceous sandstones and siltstones, the youngest of which are considered maximum depositional ages. Our results confirm that the Elliot Formation contains the Triassic–Jurassic boundary, making it one of the few fossiliferous continental units that records the effects of the end-Triassic Mass Extinction event. Our work suggests a mid-Norian–Rhaetian age for the lower Elliot Formation and a Hettangian–Sinemurian age for the upper Elliot Formation, although the precise stratigraphic position of the Triassic/Jurassic (Rhaetian/Hettangian) boundary remains somewhat uncertain. A mainly Pliensbachian age is obtained for the Clarens Formation. The new dates allow direct comparison with better-calibrated Triassic-Jurassic faunas of the Western Hemisphere (e.g., Chinle and Los Colorados formations). We show that sauropodomorph, but not ornithischian or theropod, dinosaurs were well-established in the main Karoo Basin ~220 million years ago, and that typical Norian faunas (e.g., aetosaurs, phytosaurs) are either rare or absent in the lower Elliot Formation, which is paucispecific compared to the upper Elliot. While this is unlikely the result of geographic sampling biases, it could be due to historical sampling intensity differences.<br> <br>
DOI: 10.6084/m9.figshare.9730163.v1
title: Median of temperature and precipitation

description: Median of Temperature and precipitation change in 2071-2100 compared to 1971-2000 from a RCP2.6 and RCP8.5 Ensemble for Germany<br>
DOI: 10.6084/m9.figshare.9730085
title: Supplement_Table

description: Supplement table show biochemical values from plasma samples.
DOI: 10.6084/m9.figshare.9730085.v1
title: Supplement_Table

description: Supplement table show biochemical values from plasma samples.
DOI: 10.6084/m9.figshare.9730100.v1
title: Dating of the upper Stormberg Group: Datasets and Supplementary Materials for the 'Chronostratigraphic framework for the upper Stormberg Group: implications for the Triassic-Jurassic boundary in southern Africa' - Bordy et al.

description: These are supplementary files to a project aimed at reviewing the stratigraphy of the upper Stormberg Group and providing its first chronostratigraphic framework.<br>The available data on Figshare include:(1) Supplement Text 1 - detailed information on the geochronological procedure (additional methods), geochronological results for each sample, and the key to animal and track outlines in Figure 2 (MS Word text file);(2) Supplemental Table S1 - complete data set of geochronological measurements for each sample and standards (MS Excel data file);(3) Supplemental Figure S1 – illustrations, for each sample, of the relative-age-probability plots (or probability density plots; PDP), concordia diagrams, and Isoplot of weighted mean date with 2σ internal error bars.<br><b>Project abstract</b>:The upper Stormberg Group (Elliot and Clarens formations) of the main Karoo Basin is well-known for its fossil vertebrate fauna, comprising early branching members of lineages including mammals, dinosaurs, and testudinates. Despite 150 years of scientific study, the upper Stormberg Group lacks radioisotopic age constraints and remains coarsely dated via imprecise faunal correlations. Here we synthesise previous litho- and magnetostratigraphic studies, and present a comprehensive biostratigraphic review of upper Stormberg fauna. We also present the results of the first geochronological assessment of the unit across the basin, using U-Pb dates derived from detrital zircons obtained from tuffaceous sandstones and siltstones, the youngest of which are considered maximum depositional ages. Our results confirm that the Elliot Formation contains the Triassic–Jurassic boundary, making it one of the few fossiliferous continental units that records the effects of the end-Triassic Mass Extinction event. Our work suggests a mid-Norian–Rhaetian age for the lower Elliot Formation and a Hettangian–Sinemurian age for the upper Elliot Formation, although the precise stratigraphic position of the Triassic/Jurassic (Rhaetian/Hettangian) boundary remains somewhat uncertain. A mainly Pliensbachian age is obtained for the Clarens Formation. The new dates allow direct comparison with better-calibrated Triassic-Jurassic faunas of the Western Hemisphere (e.g., Chinle and Los Colorados formations). We show that sauropodomorph, but not ornithischian or theropod, dinosaurs were well-established in the main Karoo Basin ~220 million years ago, and that typical Norian faunas (e.g., aetosaurs, phytosaurs) are either rare or absent in the lower Elliot Formation, which is paucispecific compared to the upper Elliot. While this is unlikely the result of geographic sampling biases, it could be from historical sampling intensity differences. <br>
DOI: 10.25375/uct.9730025
title: Platbos 1 Data

description: This dataset comprises of data relating to the publication: MacPherson, A.J , Gillson, L. and , Hoffman, M.T (2019). Between- and within-biome resistance and resilience at the fynbos-forest ecotone, South Africa.
DOI: 10.25375/uct.9730004
title: Groenkloof 3 Data

description: This dataset consists of data associated with the publication: MacPherson, A.J., Gillson, L. and Hoffman, M.T. (2018). Climatic buffering and anthropogenic degradation of a Mediterranean-type shrubland refugium at is semi-arid boundary, South Africa. <i>The Holocene</i> 28(4): 651-666.
DOI: 10.25375/uct.9730025.v1
title: Platbos 1 Data

description: This dataset comprises of data relating to the publication: MacPherson, A.J , Gillson, L. and , Hoffman, M.T (2019). Between- and within-biome resistance and resilience at the fynbos-forest ecotone, South Africa.
DOI: 10.25375/uct.9730004.v1
title: Groenkloof 3 Data

description: This dataset consists of data associated with the publication: MacPherson, A.J., Gillson, L. and Hoffman, M.T. (2018). Climatic buffering and anthropogenic degradation of a Mediterranean-type shrubland refugium at is semi-arid boundary, South Africa. <i>The Holocene</i> 28(4): 651-666.
DOI: 10.6084/m9.figshare.9729920
title: GasPower

description: This is the detailed data of IEEE 39-bus system and Belgium 20-node gas system. It can be used for co-optimization/scheduling of integrated electricity-gas systems.<br>The diagrams of the systems are given as well.
DOI: 10.6084/m9.figshare.9729914
title: Data_Solution-Focused Group in People with SCI

description: <b>Study design</b>: A pre-post study<b>Objective</b>: Conduct a pilot study of the solution-focused group therapy (SFGT) on pain management for people with spinal cord injury (SCI).<b>Setting</b>: Medical and rehabilitation centers in Taiwan. <b>Method</b>: 26 people with SCI and neuropathic pain join SFGT, once a week 90 minutes for 6 weeks, to achieve pain management goals of accepting pain and committing their new-life goals according to their successful experience.Using 6 scales to be the pre-post testing, include pain intensity (0-10 numeric rating scale), brief pain inventory-pain inference, chronic pain self-efficacy scale, pain fear (0-10 numeric rating scale), depression (patient health questionnaire-9), demoralization (demoralization scale), post-traumatic growth inventory and life quality (WHOQOL-BREF). <b>Results</b>: The pain intensity perceived by participants was significantly reduced from the intervention according to the mean (95% CI) reduction in pain from pre to post assessment was -1.12/10 points (5.35 to 4.23). And the pain self-efficacy significantly improved on the mean (95% CI) increase in pain self-efficacy from pre to post assessment was +11/130 points (57.5 to 68.5).
DOI: 10.6084/m9.figshare.9729911
title: Gas-Power

description: This is the detailed data of IEEE 39-bus system and Belgium 20-node gas system. It can be used for co-optimization/scheduling of integrated electricity-gas systems.<br>The diagrams of the systems are given as well.
DOI: 10.6084/m9.figshare.9729920.v1
title: GasPower

description: This is the detailed data of IEEE 39-bus system and Belgium 20-node gas system. It can be used for co-optimization/scheduling of integrated electricity-gas systems.<br>The diagrams of the systems are given as well.
DOI: 10.6084/m9.figshare.9729911.v2
title: Gas-Power

description: This is the detailed data of IEEE 39-bus system and Belgium 20-node gas system. It can be used for co-optimization/scheduling of integrated electricity-gas systems.<br>The diagrams of the systems are given as well.
DOI: 10.6084/m9.figshare.9729911.v1
title: Integrated electricity-gas system

description: This is the detailed data of IEEE 39-bus system and Belgium 20-node gas system. It can be used for co-optimization/scheduling of integrated electricity-gas systems.<br>The diagrams of the systems are given as well.
DOI: 10.6084/m9.figshare.9729902.v1
title: LncRNA-seq data

description: The statistical analysis on lncRNA transcriptome revealed that several lncRNAs are differentially expressed between RBM3-overexpressing and control cells.
DOI: 10.6084/m9.figshare.9729920.v2
title: GasPower

description: This is the detailed data of IEEE 39-bus system and Belgium 20-node gas system. It can be used for co-optimization/scheduling of integrated electricity-gas systems.<br>The diagrams of the systems are given as well.
DOI: 10.6084/m9.figshare.9729884
title: Research on function mechanism of knowledge lattice on gazelle enterprises’ relay innovation—Using knowledge matching and knowledge transfer as conducting variables

description: Relay innovation is a dynamic course from innovation capability identification to innovation capability inheritance, which can realize the deep division and integration of "innovation chain". It plays roles in the advantages of the heterogeneity of the parties, meet the needs of the enterprise's innovation process, and the knowledge lattice can solve the problem that knowledge workers can not understand, such as theacquired knowledge in the relay innovation. Taking the gazelle enterprises as research objects, this study constructs the analytical framework of function mechanism of knowledge lattice on relay innovation, and introduces knowledge matching and knowledge transfer as the conducting variables of empirical verification. The empirical analysis results show that the knowledge lattice significantly affects the knowledge matching, the knowledge matching significantly affects the knowledge transfer, and further the knowledge transfer significantly affects the relay innovation.
DOI: 10.6084/m9.figshare.9729920.v3
title: GasPower

description: This is the detailed data of IEEE 39-bus system and Belgium 20-node gas system. It can be used for co-optimization/scheduling of integrated electricity-gas systems.<br>The diagrams of the systems are given as well.
DOI: 10.6084/m9.figshare.9729857
title: Raw Acoustic and Tymbal Measurements

description: "acoustic_measurements.csv" - Contains raw output from Avisoft for tiger moth clicks in this study.<br>"tymbal_measurements.csv" - Contains raw SEM image measurements of tymbal, thorax, and microtymbal measurements for each individual in this study.
DOI: 10.6084/m9.figshare.9729857.v1
title: Raw Acoustic and Tymbal Measurements

description: "acoustic_measurements.csv" - Contains raw output from Avisoft for tiger moth clicks in this study.<br>"tymbal_measurements.csv" - Contains raw SEM image measurements of tymbal, thorax, and microtymbal measurements for each individual in this study.
DOI: 10.6084/m9.figshare.9729704
title: MOESM3 of A highly mutagenised barley (cv. Golden Promise) TILLING population coupled with strategies for screening-by-sequencing

description: Additional file 3: Table S2. Results of the effects as predicted by SnpEff on the individual transcripts.
DOI: 10.6084/m9.figshare.9729704.v1
title: MOESM3 of A highly mutagenised barley (cv. Golden Promise) TILLING population coupled with strategies for screening-by-sequencing

description: Additional file 3: Table S2. Results of the effects as predicted by SnpEff on the individual transcripts.
DOI: 10.6084/m9.figshare.9729674
title: Additional file 1 of Gene co-expression network analysis reveals pathways associated with graft healing by asymmetric profiling in tomato

description: Table S1. Mapping information of the 32 transcriptoms. Table S2. Log2-transformed FPKM values of the 3409 variable genes. Table S3. Significant GO terms of each gene set. (XLSX 1705 kb)
DOI: 10.6084/m9.figshare.9729674.v1
title: Additional file 1 of Gene co-expression network analysis reveals pathways associated with graft healing by asymmetric profiling in tomato

description: Table S1. Mapping information of the 32 transcriptoms. Table S2. Log2-transformed FPKM values of the 3409 variable genes. Table S3. Significant GO terms of each gene set. (XLSX 1705 kb)
DOI: 10.6084/m9.figshare.9729638
title: Data for: "Tri-trophic interactions mediate the spread of a vector-borne plant pathogen"

description: This .csv file provides the raw data used for linear models and path analysis presented in the paper Clark et al. 2019 "Tri-trophic interactions mediate the spread of a vector-borne plant pathogen" in <i>Ecology.</i>
DOI: 10.6084/m9.figshare.9729548
title: S100A8/A9 in VLST

description: Very late stent thrombosis (VLST) remains an uncommon, but serious complication following percutaneous coronary intervention (PCI). We aimed to reveal the S100A8/A9 role in the development of VLST after PCI for acute myocardial infarction (AMI).
DOI: 10.6084/m9.figshare.9729467
title: Salke et al_2019_Ce-H system_CIF.zip

description: Data sets of <i>in-situ</i> XRD of synthesized Cerium hydride compounds, density of states and comparison of cerium superhydride with other hydrides etc.CIF files of theoretically predicted compounds of Ce-H system.
DOI: 10.6084/m9.figshare.9729467.v1
title: Salke et al_2019_Ce-H system_CIF.zip

description: Data sets of <i>in-situ</i> XRD of synthesized Cerium hydride compounds. CIF files of theoretically predicted compounds of Ce-H system.
DOI: 10.6084/m9.figshare.9729431
title: uPAD DATA Figs 3_4_5_6.xlsx

description: The given data set (Sheet 1) compiles the growth scores of several different yeast and bacterial colonies grown on different channel parameters (varied agar volume and channel width). The qualifications for each growth score are given as part of Figures 1 and 2 for the corresponding submission. The growth scores and statistical analysis of such scores compose the data visualized in Figures 3 and 4.<br>Sheet 2 of the data set compares the growth rates of yeast and bacteria as measured by the traditional assay and proposed uPAD assay for both microbes, as well as a statistical analysis of the correlation between the growth scores recorded with both assays. The traditional assays for the yeast and bacteria include a suspended culture measured by spectrophotometry and a Petri dish assay to measure colonial diameter, respectively. The data from these experiments are visualized in Figures 5 and 6.
DOI: 10.6084/m9.figshare.9729467.v2
title: Salke et al_2019_Ce-H system_CIF.zip

description: Data sets of <i>in-situ</i> XRD of synthesized Cerium hydride compounds, comparison of cerium superhydride with other hydrides etc. CIF files of theoretically predicted compounds of Ce-H system.
DOI: 10.6084/m9.figshare.9729431.v2
title: uPAD DATA Figs 3_4_5_6.xlsx

description: The given data set (Sheet 1) compiles the growth scores of several different yeast and bacterial colonies grown on different channel parameters (varied agar volume and channel width). The qualifications for each growth score are given as part of Figures 1 and 2 for the corresponding submission. The growth scores and statistical analysis of such scores compose the data visualized in Figures 3 and 4.<br>Sheet 2 of the data set compares the growth rates of yeast and bacteria as measured by the traditional assay and proposed uPAD assay for both microbes, as well as a statistical analysis of the correlation between the growth scores recorded with both assays. The traditional assays for the yeast and bacteria include a suspended culture measured by spectrophotometry and a Petri dish assay to measure colonial diameter, respectively. The data from these experiments are visualized in Figures 5 and 6.
DOI: 10.6084/m9.figshare.9729431.v1
title: DATA for Figs 3_4_5_6.xlsx

description: The given data set (Sheet 1) compiles the growth scores of several different yeast and bacterial colonies grown on different channel parameters (varied agar volume and channel width). The qualifications for each growth score are given as part of Figures 1 and 2 for the corresponding submission. The growth scores and statistical analysis of such scores compose the data visualized in Figures 3 and 4.<br>Sheet 2 of the data set compares the growth rates of yeast and bacteria as measured by the traditional assay and proposed uPAD assay for both microbes, as well as a statistical analysis of the correlation between the growth scores recorded with both assays. The traditional assays for the yeast and bacteria include a suspended culture measured by spectrophotometry and a Petri dish assay to measure colonial diameter, respectively. The data from these experiments are visualized in Figures 5 and 6.
DOI: 10.6084/m9.figshare.9729326
title: Spo0 pathway and curated Firmicutes

description: List of manually curated Firmicutes having the Spo0 predicted pathway<br>Columns from "A" to "Q" show each predicted architecture<br>"0" stands for a not predicted architecture"1" stands for a predicted architectureColumns from "R" to "U" carry:<br>KEGG organism identifierClassSpeciesPhenotype<br>Columns from "V" to "W" show the bibliographic reference; in all cases, we are giving live links to the publications. Column "V" shows annotations found in public curated databases.
DOI: 10.6084/m9.figshare.9729314
title: Gene expression profiling of SKOV-3 cells with or without PDK1 knocked down (Control versus siPDK1)

description: Created on 24 Aug 2019 - 01:28 by Michelle SiuTo examine the downstream targets of PDK1 in ovarian cancer. siRNA specifically targeting PDK1 (sc-36203) and control siRNA (Santa Cruz Biotechnology) were introduced into SKOV-3 cells using SilentFect for 48 hr. RNA was harvested using Trizol reagent. RNA preparation, library construction and sequencing with the BGISEQ-500 platform were performed at Beijing Genomics Institute (BGI, Shenzhen, China). 1) There are two methods to treat total RNA. Oligo (dT) magnetic beads are used to select mRNA with polyA tail, or hybridize the rRNA with DNA probe and digest the DNA/RNA hybrid strand, followed by DNase I reaction to remove DNA probe. Then obtain the target RNA after purification. 2) Fragment the target RNA and reverse transcription to double- strand cDNA (dscDNA) by N6 random primer. 3) End repair the dscDNA with phosphate at 5' end and stickiness 'A' at 3' end, then ligate and adaptor with stickiness 'T' at 3' end to the dscDNA. 4) Two specific primers are used to amplify the ligation product. 5) Denature the PCR product by heat and the single strand DNA is cyclized by splint oligo and DNA ligase. 6) Perform sequencing on prepared library. Gene expression levels were quantified using RNA-Seq by Expectation Maximization (RSEM) (Li and Dewey, 2011). The DEseq2 method was applied to detect differentially expressed genes (DEG) between groups. genome build: hg19Sample 1 (SK_C1_1): Control 1, SKOV-3<br>Sample 2 (SK_C2_1): Control 2, SKOV-3<br>Sample 3 (SK_siPD1_1): siPDK1 1, SKOV-3<br>Sample 4 (SK_siPD2_1): siPDK1 2, SKOV-3<br>SK_C-VS-SK_siPD.DEseq2_Method_GEO<br>
DOI: 10.6084/m9.figshare.9729326.v2
title: Spo0 pathway and curated Firmicutes

description: List of manually curated Firmicutes having the Spo0 predicted pathway<br>Columns from "A" to "Q" show each predicted architecture<br>"0" stands for a not predicted architecture"1" stands for a predicted architectureColumns from "R" to "U" carry:<br>KEGG organism identifierClassSpeciesPhenotype<br>Columns from "V" to "W" show the bibliographic reference; in all cases, we are giving live links to the publications. Column "V" shows annotations found in public curated databases.
DOI: 10.6084/m9.figshare.9729326.v1
title: Spo0 pathway and curated Firmicutes

description: List of manually curated Firmicutes having the Spo0 predicted pathway<br>Columns from "A" to "Q" show each predicted architecture<br>"0" stands for a not predicted architecture"1" stands for a predicted architectureColumns from "R" to "U" carry:<br>KEGG organism identifierClassSpeciesPhenotype<br>Columns from "V" to "W" show the bibliographic reference; in all cases, we are giving live links to the publications. Column "V" shows annotations found in public curated databases.