cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25909/24323299.v1
title: Graph Pad prism files of all data published in Roennfeldt et al. (2023). Data points for each experiment represents the mean of an individual replicate (and thus each experiment was completed in triplicate with the mean +/- standard deviation graphed).

description: The Hypoxia Inducible Factor (HIF) transcription factors are imperative for cell adaption to low oxygen conditions and development, however, they also contribute to ischaemic disease and cancer. To identify novel genetic regulators which target the HIF pathway or small molecules for therapeutic use, cell-based reporter systems are commonly used. Here, we present a new, highly sensitive and versatile reporter system, NanoFIRE; a NanoLuciferase and Fluorescent Integrated Reporter Element. Under the control of a Hypoxic Response Element (HRE-NanoFIRE), this system is a robust sensor of HIF activity within cells and potently responds to both hypoxia and chemical inducers of the HIF pathway in a highly reproducible and sensitive manner, consistently achieving 20 to 150-fold induction across different cell types and a Z’ score &gt; 0.5. We demonstrate that the NanoFIRE system is adaptable via substitution of the response element controlling NanoLuciferase and show that it can report on the activity of the transcriptional regulator Factor Inhibiting HIF, and an unrelated transcription factor, the Progesterone Receptor. Furthermore, the lentivirus-mediated stable integration of NanoFIRE highlights the versatility of this system across a wide range of cell types, including primary cells. Together, these finding demonstrate NanoFIRE is a robust reporter system for the investigation of HIF and other transcription factor mediated signalling pathways in cells, with applications in high throughput screening for the identification of novel small molecule and genetic regulators.
DOI: 10.25909/24419179
title: Performance and characteristics of barley germplasm with wild barley allele introgression

description: Data of 20 traits measured on a collection of 118 barley germplasms in field trials conducted over the three years 2020-2022. The trials were conducted in a range of environments, with different rainfall across four states (SA, VIC, NSW, WA). The dataset comprises: (1) Trial information for all sites across 3 years, including experimental design and trial management data; (2) Raw phenotypic data; (3) Markers and genotypic data for the set of tested germplasms. 20 traits were measured, including:Early establishment (in counts, the average of the number of emerged plants recorded on 50 cm distance of two rows for three times per plot)Early establishment per m2Days to booting (days from sowing to awn peep 1cm, in days),Plant height (distance from the ground to the tip of the awn, in cm),Fertile and total tiller number from harvest cut and per m2 (TIN, in counts),Grain number per ear (GPE, which was the average grain number per ear of 15 ears randomly selected from each plot, excluding flat and undeveloped grains, in counts), Number of abnormal grain/earThousand-grain weight (TGW, weight of thousand grains, in g),Test weight (weight of the seeds in a hundred litre, in kg/hL),Harvest index (HI, percentage of weight of plot grain weight from the harvest cut to the total above-ground dry mass, in %),Dry biomassScreening (percent of grain that was small enough to pass through the 2.2 mm sieve),Lodging (1-9 scale, with 1 is plant standing straight and 9 is the plant lying on the ground, in number),Final grain yield (Grain weight from a plot per plot size and kg/m2 and then convert to t/ha)Additionally, disease incidence for net form (NFNB), spot form of net blotch (SFNB), and barley leaf rust (BLR) were also recorded if present. The scale for rating diseases is 1-9 with 1 is no symptoms of diseases and 9 is heavily infested with diseases.
DOI: 10.25909/24419179.v1
title: Performance and characteristics of barley germplasm with wild barley allele introgression

description: Data of 20 traits measured on a collection of 118 barley germplasms in field trials conducted over the three years 2020-2022. The trials were conducted in a range of environments, with different rainfall across four states (SA, VIC, NSW, WA). The dataset comprises: (1) Trial information for all sites across 3 years, including experimental design and trial management data; (2) Raw phenotypic data; (3) Markers and genotypic data for the set of tested germplasms. 20 traits were measured, including:Early establishment (in counts, the average of the number of emerged plants recorded on 50 cm distance of two rows for three times per plot)Early establishment per m2Days to booting (days from sowing to awn peep 1cm, in days),Plant height (distance from the ground to the tip of the awn, in cm),Fertile and total tiller number from harvest cut and per m2 (TIN, in counts),Grain number per ear (GPE, which was the average grain number per ear of 15 ears randomly selected from each plot, excluding flat and undeveloped grains, in counts), Number of abnormal grain/earThousand-grain weight (TGW, weight of thousand grains, in g),Test weight (weight of the seeds in a hundred litre, in kg/hL),Harvest index (HI, percentage of weight of plot grain weight from the harvest cut to the total above-ground dry mass, in %),Dry biomassScreening (percent of grain that was small enough to pass through the 2.2 mm sieve),Lodging (1-9 scale, with 1 is plant standing straight and 9 is the plant lying on the ground, in number),Final grain yield (Grain weight from a plot per plot size and kg/m2 and then convert to t/ha)Additionally, disease incidence for net form (NFNB), spot form of net blotch (SFNB), and barley leaf rust (BLR) were also recorded if present. The scale for rating diseases is 1-9 with 1 is no symptoms of diseases and 9 is heavily infested with diseases.
DOI: 10.25909/24457120
title: Supplementary File S2

description: Species richness and endemicity rankings for each South Australian spring group. Modified Fensham and Price (Fensham & Price, 2004) rankings were sourced from Rossini et al. (2018).
DOI: 10.25909/24457120.v1
title: Supplementary File S2

description: Species richness and endemicity rankings for each South Australian spring group. Modified Fensham and Price (Fensham & Price, 2004) rankings were sourced from Rossini et al. (2018).
DOI: 10.25909/24532705
title: Human Head Vertex Impact Resources - Force-Displacement Data

description: Deformation and force data for 22 isolated human cephalus (heads) subjected to single dynamic impact events, in a drop tower.The spreadsheet contains two tabs. The first tab "Deformation" contains Deformation data, in units of [mm]. The columns correspond to the specimens (IDs are given in the first line), and the second row indicates the nominal impact velocity.The second tab "Force" contains axial force data, in units of [N]. The columns correspond to the specimens (IDs are given in the first line), and the second row indicates the nominal impact velocity.Test protocol, specimen information, and data collection and post-processing details are provided in detail in the following manuscript: Thompson-Bagshaw DW, Quarrington RD, Dwyer AM, Jones NR, Jones CF. The Structural Response of the Human Head to a Vertex Impact. Ann Biomed Eng. 2023 Dec;51(12):2897-2907. doi: 10.1007/s10439-023-03358-z. Epub 2023 Sep 21. PMID: 37733109.
DOI: 10.25909/24532705.v1
title: Human Head Vertex Impact Resources - Force-Displacement Data

description: Deformation and force data for 22 isolated human cephalus (heads) subjected to single dynamic impact events, in a drop tower.The spreadsheet contains two tabs. The first tab "Deformation" contains Deformation data, in units of [mm]. The columns correspond to the specimens (IDs are given in the first line), and the second row indicates the nominal impact velocity.The second tab "Force" contains axial force data, in units of [N]. The columns correspond to the specimens (IDs are given in the first line), and the second row indicates the nominal impact velocity.Test protocol, specimen information, and data collection and post-processing details are provided in detail in the following manuscript: Thompson-Bagshaw DW, Quarrington RD, Dwyer AM, Jones NR, Jones CF. The Structural Response of the Human Head to a Vertex Impact. Ann Biomed Eng. 2023 Dec;51(12):2897-2907. doi: 10.1007/s10439-023-03358-z. Epub 2023 Sep 21. PMID: 37733109.
DOI: 10.25909/24539989
title: Human head vertex impact resources: geometry of mount for isolated cephalus.

description: .OBJ file containing the geometry for a generalised foramen magnum/occiput mounts for isolated human cephalus (heads), subjected to single dynamic impact events, in a drop tower.A .OBJ format is a simple and open format with wide export and import support among CAD software.The related test protocol, specimen information, and data collection and post-processing details are provided in detail in the following manuscript:Thompson-Bagshaw DW, Quarrington RD, Dwyer AM, Jones NR, Jones CF. The Structural Response of the Human Head to a Vertex Impact. Ann Biomed Eng. 2023 Dec;51(12):2897-2907. doi: 10.1007/s10439-023-03358-z. Epub 2023 Sep 21. PMID: 37733109.
DOI: 10.25909/24539989.v1
title: Human head vertex impact resources: geometry of mount for isolated cephalus.

description: .OBJ file containing the geometry for a generalised foramen magnum/occiput mounts for isolated human cephalus (heads), subjected to single dynamic impact events, in a drop tower.A .OBJ format is a simple and open format with wide export and import support among CAD software.The related test protocol, specimen information, and data collection and post-processing details are provided in detail in the following manuscript:Thompson-Bagshaw DW, Quarrington RD, Dwyer AM, Jones NR, Jones CF. The Structural Response of the Human Head to a Vertex Impact. Ann Biomed Eng. 2023 Dec;51(12):2897-2907. doi: 10.1007/s10439-023-03358-z. Epub 2023 Sep 21. PMID: 37733109.
DOI: 10.25909/24540067
title: Human Head Vertex Impact Resources - Cephalus computed tomography images

description: De-identified computed tomography images of 22 human cephalus, in DICOM (.dcm) format.Scanning parameters and specimens IDs correspond to those detailed in the following manuscript:Thompson-Bagshaw DW, Quarrington RD, Dwyer AM, Jones NR, Jones CF. The Structural Response of the Human Head to a Vertex Impact. Ann Biomed Eng. 2023 Dec;51(12):2897-2907. doi: 10.1007/s10439-023-03358-z. Epub 2023 Sep 21. PMID: 37733109.
DOI: 10.25909/24540067.v1
title: Human Head Vertex Impact Resources - Cephalus computed tomography images

description: De-identified computed tomography images of 22 human cephalus, in DICOM (.dcm) format.Scanning parameters and specimens IDs correspond to those detailed in the following manuscript:Thompson-Bagshaw DW, Quarrington RD, Dwyer AM, Jones NR, Jones CF. The Structural Response of the Human Head to a Vertex Impact. Ann Biomed Eng. 2023 Dec;51(12):2897-2907. doi: 10.1007/s10439-023-03358-z. Epub 2023 Sep 21. PMID: 37733109.
DOI: 10.25909/24571135
title: Activity_GeorgiaClarke_DataforR_21012022.xlsx

description: Raw metabolic cage data from pregnant and non-pregnant mice during acclimitsation and from mating (or age matched day) till late-pregnancy (d 17.5). Data used for circadian analysis of behaviour
DOI: 10.25909/24571135.v1
title: Activity_GeorgiaClarke_DataforR_21012022.xlsx

description: Raw metabolic cage data from pregnant and non-pregnant mice during acclimitsation and from mating (or age matched day) till late-pregnancy (d 17.5). Data used for circadian analysis of behaviour
DOI: 10.25909/24579397
title: Activity_GeorgiaClarke_DataforR_21012022.xlsx

description: Raw activity metabolic cage data from pregnant and non-pregnant mice during acclimitsation and from mating (or age matched day) till late-pregnancy (d 17.5). Data used for circadian analysis of behaviour
DOI: 10.25909/24579397.v1
title: Activity_GeorgiaClarke_DataforR_21012022.xlsx

description: Raw activity metabolic cage data from pregnant and non-pregnant mice during acclimitsation and from mating (or age matched day) till late-pregnancy (d 17.5). Data used for circadian analysis of behaviour
DOI: 10.25909/24579427
title: wateruptake_GeorgiaClarke_DataforR_21012022.xlsx

description: Raw water intake metabolic cage data from pregnant and non-pregnant mice during acclimitsation and from mating (or age matched day) till late-pregnancy (d 17.5). Data used for circadian analysis of behaviour
DOI: 10.25909/24579427.v1
title: wateruptake_GeorgiaClarke_DataforR_21012022.xlsx

description: Raw water intake metabolic cage data from pregnant and non-pregnant mice during acclimitsation and from mating (or age matched day) till late-pregnancy (d 17.5). Data used for circadian analysis of behaviour
DOI: 10.15468/dl.tuth4x
title: Occurrence Download

description: A dataset containing 624625 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acrocephalus palustris",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-180 -90, 180 -90, 180 90, -180 90, -180 -90))"
 ]
}

 The dataset includes 624625 records from 799 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054221-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.teqh2j
title: Occurrence Download

description: A dataset containing 11635460 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is BirdLife Australia, Birdata"
 ]
}

 The dataset includes 11635460 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0349054-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbphgp
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Kaloula ghoshi Cherchi, 1954)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059134-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-47051
title: Redemption tidings, vol. 21, nos. 1-26, 5 Jan. - 21 Dec. 1945

description: [description english/roman)] Issued fortnightly (every two weeks). "A full gospel magazine for all believers" -- subtitle. Includes Tidings from our missionaries in each issue (5-19 Jan., 16 Feb. - 27 Apr., 25 May - 3 Aug., 31 Aug. - 21 Dec. 1945) except vol. 21, nos. 3, 10 & 17.
DOI: 10.15468/dl.sifogr
title: Occurrence Download

description: A dataset containing 2033 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oreothlypis crissalis (Salvin & Godman, 1889)"
 ]
}

 The dataset includes 2033 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012036-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wkht4y
title: Occurrence Download

description: A dataset containing 5789 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euterpe oleracea Mart."
 ]
}

 The dataset includes 5789 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0342495-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.caky43
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Milionia zonea Moore, 1872",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 36 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190739-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8jftzy
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus hastiformis W.C.R.Watson"
 ]
}

 The dataset includes 115 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106086-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.etk22a
title: Occurrence Download

description: A dataset containing 141 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Schefflerodendron Harms"
 ]
}

 The dataset includes 141 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0349067-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18112/openneuro.ds005025.v2.3.1
title: Traveling Spine 7T CoilQA
DOI: 10.15468/dl.h45kx5
title: Occurrence Download

description: A dataset containing 1978800 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((139.00012 34.00012,139.00012 39.00012,138.00012 39.00012,138.00012 38.00012,137.00012 38.00012,136.00012 38.00012,136.00012 37.00012,135.00012 37.00012,135.00012 36.00012,134.00012 36.00012,134.00012 37.00012,133.00012 37.00012,133.00012 38.00012,132.00012 38.00012,131.00012 38.00012,131.00012 37.00012,132.00012 37.00012,132.00012 36.00012,131.00012 36.00012,131.00012 35.00012,131.00012 30.00012,132.00012 30.00012,132.00012 31.00012,132.00012 32.00012,133.00012 32.00012,134.00012 32.00012,134.00012 33.00012,135.00012 33.00012,136.00012 33.00012,137.00012 33.00012,137.00012 34.00012,138.00012 34.00012,139.00012 34.00012))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1978800 records from 839 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190731-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-47918
title: Redemption tidings, vol. 24, nos. 1-26, 2 Jan. - 17 Dec. 1948

description: [description english/roman)] Issued fortnightly (every two weeks). "A full gospel magazine for all believers" -- subtitle. Includes Tidings from our missionaries in each issue (2-16 Jan., 13 Feb. - 23 Apr., 21 May - 17 Dec. 1948) except vol. 24 nos. 3 & 10. Bound with vol. 25.
DOI: 10.15468/dl.9ebayg
title: Occurrence Download

description: A dataset containing 941547 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sterna hirundo Linnaeus, 1758)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 941547 records from 541 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254143-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y5erfp
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Melanophryniscus montevidensis (Philippi, 1902))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 79 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059136-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kzc8fb
title: Occurrence Download

description: A dataset listing the 643 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "DatasetKey is Xeno-canto - Bird sounds from around the world",
 "Geometry POLYGON((74.64525 14.97029,125.97338 14.97029,125.97338 35.49275,104.56787 35.1123,103.99658 35.37598,74.64525 35.49275,74.64525 14.97029))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2015-2022"
 ]
}

 The dataset's 643 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144606-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zgbgge
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Occurrence evidence"
 ]
 },
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tarsiger hyperythrus (Blyth, 1847)",
 "Year 1972-2022"
 ]
}

 The dataset includes 164 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0323805-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mftzbn
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Melanophryniscus dorsalis (Mertens, 1933))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 26 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059113-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.