cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3901432_d3
title: Additional file 2: Table S2. of Lifestyle, gene gain and loss, and transcriptional remodeling cause divergence in the transcriptomes of Phytophthora infestans and Pythium ultimum during potato tuber colonization

description: CPM values of all genes. Table S5. Pseudogene candidates from Ph. infestans and Py. ultimum. Table S6. Species-specific genes from Ph. infestans and Py. ultimum. Table S7. Revised annotations of Ph. infestans genes. Table S8. Revised annotations of Py. ultimum genes. Table S9. Primers used for RT-qPCR. (XLSX 4887Â kb)
DOI: 10.6084/m9.figshare.c.3902479_d2.v1
title: Additional file 2: Table S2. of Comparative analysis of miRNA expression during the development of insects of different metamorphosis modes and germ-band types

description: Description of the 67 miRNAs newly identified in Blattella germanica. (XLS 41Â kb)
DOI: 10.6084/m9.figshare.c.3902479_d3.v1
title: Additional file 3: Table S3. of Comparative analysis of miRNA expression during the development of insects of different metamorphosis modes and germ-band types

description: Read counts of each miRNA gene in the Blattella germanica stage-libraries studied. (XLS 56Â kb)
DOI: 10.6084/m9.figshare.c.3902479_d2
title: Additional file 2: Table S2. of Comparative analysis of miRNA expression during the development of insects of different metamorphosis modes and germ-band types

description: Description of the 67 miRNAs newly identified in Blattella germanica. (XLS 41Â kb)
DOI: 10.6084/m9.figshare.c.3902479_d3
title: Additional file 3: Table S3. of Comparative analysis of miRNA expression during the development of insects of different metamorphosis modes and germ-band types

description: Read counts of each miRNA gene in the Blattella germanica stage-libraries studied. (XLS 56Â kb)
DOI: 10.6084/m9.figshare.c.3902503_d1.v1
title: Additional file 1: Table S1. of Hazardous waste and health impact: a systematic review of the scientific literature

description: Hazardous waste: general population mortality and morbidity [65â  87] (XLSX 51 kb)
DOI: 10.15468/dl.sddqrj
title: Occurrence Download

description: A dataset containing 117373 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates catesbeianus (Shaw, 1802))"
 ]
}

 The dataset includes 117373 records from 266 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040310-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3902536_d12
title: Additional file 2: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Details of 319 transcripts with fold changes that are uniquely differentially expressed at 14dpa developmental stage across all the genotypes between 14 and 30dpa with FDR cut-off value at 0.01. (XLSX 380Â kb)
DOI: 10.6084/m9.figshare.c.3902536_d13
title: Additional file 3: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Details of 16,237 transcripts with fold changes that are differentially upregulated at 14dpa developmental stage across all the genotypes between 14 and 30dpa with FDR cut-off value at 0.01. (XLSX 28237Â kb)
DOI: 10.6084/m9.figshare.c.3902536_d16.v1
title: Additional file 6: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Nucleotide sequence details of 319 transcripts from TaGI cDNA database that are uniquely differentially expressed at the 14dpa developmental stage. (FA 249Â kb)
DOI: 10.6084/m9.figshare.c.3902536_d14.v1
title: Additional file 4: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Details of 9740 transcripts with fold changes that are differentially upregulated at 30dpa developmental stage across all the genotypes between 14 and 30DPA with FDR cut-off value at 0.01. (XLSX 17001Â kb)
DOI: 10.6084/m9.figshare.c.3902536_d15.v1
title: Additional file 5: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Details of 181 transcripts with fold changes that are uniquely differentially expressed at 30dpa developmental stage across all the genotypes between 14 and 30dpa with FDR cut-off value at 0.01. (XLSX 213Â kb)
DOI: 10.6084/m9.figshare.c.3902536_d14
title: Additional file 4: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Details of 9740 transcripts with fold changes that are differentially upregulated at 30dpa developmental stage across all the genotypes between 14 and 30DPA with FDR cut-off value at 0.01. (XLSX 17001Â kb)
DOI: 10.6084/m9.figshare.c.3902536_d15
title: Additional file 5: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Details of 181 transcripts with fold changes that are uniquely differentially expressed at 30dpa developmental stage across all the genotypes between 14 and 30dpa with FDR cut-off value at 0.01. (XLSX 213Â kb)
DOI: 10.6084/m9.figshare.c.3902536_d16
title: Additional file 6: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Nucleotide sequence details of 319 transcripts from TaGI cDNA database that are uniquely differentially expressed at the 14dpa developmental stage. (FA 249Â kb)
DOI: 10.6084/m9.figshare.c.3902536_d17.v1
title: Additional file 7: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Nucleotide sequence details of 16,237 transcripts from TaGI cDNA database that are differentially upregulated at the 14dpa developmental stage. (FA 16754Â kb)
DOI: 10.21223/ia5nr7
title: Dataset for: Evaluation of the Morphological Characterization of Native Potato Varieties in Cochacochayocc, Paucartambo - Cusco, 2024

description: In the Cochacochayoq field, Paucartambo, 80 native potato varieties were planted using zero-tillage practices. Agronomic management activities included Yapuy (maintenance), Jaimay (first earthing-up), and Qasuy (final maintenance). The experiment evaluates the morphological characteristics of native potatoes, including tuber traits and flower attributes. This study aims to assess the agronomic performance of these varieties under sustainable conditions, focusing on conserving genetic diversity and improving agricultural practices in the Paucartambo region.
DOI: 10.6084/m9.figshare.c.3902536_d17
title: Additional file 7: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Nucleotide sequence details of 16,237 transcripts from TaGI cDNA database that are differentially upregulated at the 14dpa developmental stage. (FA 16754Â kb)
DOI: 10.6084/m9.figshare.c.3902581_d3.v1
title: MOESM3 of Informing new or improved vector control tools for reducing the malaria burden in Tanzania: a qualitative exploration of perceptions of mosquitoes and methods for their control among the residents of Dar es Salaam

description: Additional file 3. Informed consent for photovoice participants (1) English version, (2) Swahili version.
DOI: 10.6084/m9.figshare.c.3902536_d18.v1
title: Additional file 8: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Nucleotide sequence details of 9740 transcripts from TaGI cDNA database that are differentially upregulated at the 30dpa developmental stage. (FA 9406Â kb)
DOI: 10.6084/m9.figshare.c.3902536_d19.v1
title: Additional file 9: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Nucleotide sequence details of 181 transcripts from TaGI cDNA database that are uniquely differentially expressed at the 30dpa developmental stage. (FA 132Â kb)
DOI: 10.6084/m9.figshare.c.3902581_d3
title: MOESM3 of Informing new or improved vector control tools for reducing the malaria burden in Tanzania: a qualitative exploration of perceptions of mosquitoes and methods for their control among the residents of Dar es Salaam

description: Additional file 3. Informed consent for photovoice participants (1) English version, (2) Swahili version.
DOI: 10.6084/m9.figshare.c.3902536_d18
title: Additional file 8: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Nucleotide sequence details of 9740 transcripts from TaGI cDNA database that are differentially upregulated at the 30dpa developmental stage. (FA 9406Â kb)
DOI: 10.6084/m9.figshare.c.3902581_d4.v1
title: MOESM4 of Informing new or improved vector control tools for reducing the malaria burden in Tanzania: a qualitative exploration of perceptions of mosquitoes and methods for their control among the residents of Dar es Salaam

description: Additional file 4. Informed consent for IDIs participants (1) English version, (2) Swahili version.
DOI: 10.6084/m9.figshare.c.3902581_d5.v1
title: MOESM5 of Informing new or improved vector control tools for reducing the malaria burden in Tanzania: a qualitative exploration of perceptions of mosquitoes and methods for their control among the residents of Dar es Salaam

description: Additional file 5. Informed consent for FGDs participants (1), English version (2) Swahili version.
DOI: 10.6084/m9.figshare.c.3902536_d19
title: Additional file 9: of The transcriptome of the developing grain: a resource for understanding seed development and the molecular control of the functional and nutritional properties of wheat

description: Nucleotide sequence details of 181 transcripts from TaGI cDNA database that are uniquely differentially expressed at the 30dpa developmental stage. (FA 132Â kb)
DOI: 10.6084/m9.figshare.c.3904504_d1.v1
title: Additional file 10: of Identification of 15 candidate structured noncoding RNA motifs in fungi by comparative genomics

description: Group I ribozyme sequences. sto file for group I ribozyme sequences and their alignment. (STO 59 kb)
DOI: 10.6084/m9.figshare.c.3904504_d1
title: Additional file 10: of Identification of 15 candidate structured noncoding RNA motifs in fungi by comparative genomics

description: Group I ribozyme sequences. sto file for group I ribozyme sequences and their alignment. (STO 59 kb)
DOI: 10.15468/dl.5pgwbu
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Equetus lanceolatus (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 82 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040327-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3904504_d2.v1
title: Additional file 11: of Identification of 15 candidate structured noncoding RNA motifs in fungi by comparative genomics

description: rps0 motif sequences. sto file for rps0 motif sequences and their alignment. (STO 9 kb)
DOI: 10.6084/m9.figshare.c.3904504_d2
title: Additional file 11: of Identification of 15 candidate structured noncoding RNA motifs in fungi by comparative genomics

description: rps0 motif sequences. sto file for rps0 motif sequences and their alignment. (STO 9 kb)
DOI: 10.6084/m9.figshare.c.3904495_d5.v1
title: Additional file 2: of Individual signatures and environmental factors shape skin microbiota in healthy dogs

description: Information about the dogs included in the study. Samples were collected April 27, 2016. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3904495_d5
title: Additional file 2: of Individual signatures and environmental factors shape skin microbiota in healthy dogs

description: Information about the dogs included in the study. Samples were collected April 27, 2016. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3904495_d6
title: Additional file 3: of Individual signatures and environmental factors shape skin microbiota in healthy dogs

description: OTU tables at genus level. A) OTU table at genus level including all the samples. B) OTU table at genus level collapsed by individual. C) OTU table at genus level collapsed by site. (XLSX 1070 kb)
DOI: 10.6084/m9.figshare.c.3904555_d1
title: Additional file 1: Table S1. of eRP arrangement: a strategy for assembled genomic contig rearrangement based on replication profiling in bacteria

description: Assemble data in each growth phase (OD600). Related to Fig. 2. (XLSX 27Â kb)
DOI: 10.6084/m9.figshare.c.3905815_d2
title: Additional file 2: Table S1. of Wound healing, calcium signaling, and other novel pathways are associated with the formation of butterfly eyespots

description: P-values and logFC (log2-fold change) of differentially expressed genes associated with eyespot development across all three comparisons. Negative logFC values represents up-regulated genes in eyespots, because the values from tissues without eyespots were divided by those tissues with eyespots. (XLSX 152 kb)
DOI: 10.6084/m9.figshare.c.3905827_d1
title: MOESM1 of Gardening in the desert: a spatial optimization approach to locating gardens in rapidly expanding urban environments

description: Additional file 1. Past and Present Phoenix Garden Locations. Point shapefile of the garden data used in this analysis.
DOI: 10.6084/m9.figshare.c.3905815_d3.v1
title: Additional file 3: Table S14. of Wound healing, calcium signaling, and other novel pathways are associated with the formation of butterfly eyespots

description: Blast2GO annotations for up-regulated genes associated with eyespots. Table S15. Blast2GO annotations for down-regulated genes associated with eyespots. Table S16. Blast2GO annotations for up-regulated sector-specific transcripts in M3 versus Cu1 wing sector. Table S17. Blast2GO annotations for down-regulated sector-specific transcripts in M3 versus Cu1 wing sector. Table S18. Blast2GO annotations for up-regulated genes in female versus male eyespots. Table S19. Blast2GO annotations for down-regulated genes in female versus male eyespots. Each table is in a different tab. (XLSX 82 kb)
DOI: 10.6084/m9.figshare.c.3905830_d2.v1
title: Additional file 1: of Genomic divergence and cohesion in a species of pelagic freshwater bacteria

description: List of all PnecC strains used in this study. (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.c.3905830_d2
title: Additional file 1: of Genomic divergence and cohesion in a species of pelagic freshwater bacteria

description: List of all PnecC strains used in this study. (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.c.3905815_d3
title: Additional file 3: Table S14. of Wound healing, calcium signaling, and other novel pathways are associated with the formation of butterfly eyespots

description: Blast2GO annotations for up-regulated genes associated with eyespots. Table S15. Blast2GO annotations for down-regulated genes associated with eyespots. Table S16. Blast2GO annotations for up-regulated sector-specific transcripts in M3 versus Cu1 wing sector. Table S17. Blast2GO annotations for down-regulated sector-specific transcripts in M3 versus Cu1 wing sector. Table S18. Blast2GO annotations for up-regulated genes in female versus male eyespots. Table S19. Blast2GO annotations for down-regulated genes in female versus male eyespots. Each table is in a different tab. (XLSX 82 kb)
DOI: 10.6084/m9.figshare.c.3905821_d2
title: Additional file 2 of TaxMapper: an analysis tool, reference database and workflow for metatranscriptome analysis of eukaryotic microorganisms

description: Taxa contained in reference database. Information on taxa contained in reference database, including taxonomic affiliation, accession number and database. (CSV 14 kb)
DOI: 10.6084/m9.figshare.c.3905821_d2.v1
title: Additional file 2 of TaxMapper: an analysis tool, reference database and workflow for metatranscriptome analysis of eukaryotic microorganisms

description: Taxa contained in reference database. Information on taxa contained in reference database, including taxonomic affiliation, accession number and database. (CSV 14 kb)
DOI: 10.6084/m9.figshare.c.3905947_d1
title: Additional file 1: of Effectiveness and safety of dipeptidyl peptidase 4 inhibitors in the management of type 2 diabetes in older adults: a systematic review and development of recommendations to reduce inappropriate prescribing

description: Excluded studies. List of excluded studies after full-text check with reasons for exclusion. (XLSX 47 kb)
DOI: 10.15468/dl.kmpnpv
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erilepis zonifer (Lockington, 1880)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040328-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3907054_d1
title: Additional file 1: of Clinicopathological and prognostic significance of programmed death ligand-1 expression in breast cancer: a meta-analysis

description: The primary characteristics of the included studies. The primary characteristics of the included studies. (XLSX 22Â kb)
DOI: 10.6084/m9.figshare.c.3907066_d1.v1
title: Additional file 1: Table S1. of Towards a balanced view of the bacterial tree of life

description: Environmental origin of metagenomic datasets. Shown is the total number of metagenomes for each environment type, the total number of extracted SSU rRNA sequences &gt;â  1200Â bp before and after quality filtering, and the total count of available basepairs in gigabases (Gb). (XLS 9Â kb)
DOI: 10.6084/m9.figshare.c.3907072_d1.v1
title: Additional file 1: of Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution

description: BLAST results from gene models. (XLSX 1068 kb)
DOI: 10.6084/m9.figshare.c.3907060_d2.v1
title: MOESM2 of Metabolic responses to ethanol and butanol in Chlamydomonas reinhardtii

description: Additional file 2: Table S1. Accession numbers of proteins detected in this study.
DOI: 10.6084/m9.figshare.c.3907066_d1
title: Additional file 1: Table S1. of Towards a balanced view of the bacterial tree of life

description: Environmental origin of metagenomic datasets. Shown is the total number of metagenomes for each environment type, the total number of extracted SSU rRNA sequences &gt;â  1200Â bp before and after quality filtering, and the total count of available basepairs in gigabases (Gb). (XLS 9Â kb)
DOI: 10.6084/m9.figshare.c.3907060_d2
title: MOESM2 of Metabolic responses to ethanol and butanol in Chlamydomonas reinhardtii

description: Additional file 2: Table S1. Accession numbers of proteins detected in this study.
DOI: 10.6084/m9.figshare.c.3907072_d1
title: Additional file 1: of Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution

description: BLAST results from gene models. (XLSX 1068 kb)
DOI: 10.6084/m9.figshare.c.3907072_d2.v1
title: Additional file 2: of Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution

description: Single nucleotide variants. (XLSX 775 kb)
DOI: 10.6084/m9.figshare.c.3907132_d8.v1
title: Additional file 8: Table S6. of An analysis of 67 RNA-seq datasets from various tissues at different stages of a model insect, Manduca sexta

description: Expression of genes in MCOT1.0. FPKM values of genes in MCOT1.0 calculated by RSEM. (XLSX 7331Â kb)
DOI: 10.6084/m9.figshare.c.3907132_d8
title: Additional file 8: Table S6. of An analysis of 67 RNA-seq datasets from various tissues at different stages of a model insect, Manduca sexta

description: Expression of genes in MCOT1.0. FPKM values of genes in MCOT1.0 calculated by RSEM. (XLSX 7331Â kb)
DOI: 10.6084/m9.figshare.c.3907132_d9.v1
title: Additional file 9: Tables of An analysis of 67 RNA-seq datasets from various tissues at different stages of a model insect, Manduca sexta

description: S7, S8 and S9. Z-score of high-expressed genes in OGS2.0 (Table S7), Cufflinks4.0 (Table S8), and MCOT1.0 (Table S9). Z-scores of genes with at least one FPKM value over 100 were calculated. The genes are in the same order as in Fig. 7, Additional file 2: Figure S1A and S1B, respectively. (XLSX 5418 kb)
DOI: 10.6084/m9.figshare.c.3907153_d9.v1
title: Additional file 8: Table S5. of Rhodopsin gene copies in Japanese eel originated in a teleost-specific genome duplication

description: Substitution models employed in ML phylogenetic tree search. (XLS 28 kb)
DOI: 10.15468/dl.auwxn8
title: Occurrence Download

description: A dataset containing 275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Diaemus youngii (Jentink, 1893)"
 ]
}

 The dataset includes 275 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040329-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3907102_d7.v1
title: Additional file 3: of Enrichment allows identification of diverse, rare elements in metagenomic resistome-virulome sequencing

description: File S2. Classification of genes at the class, mechanism and group levels. (CSV 764Â kb)
DOI: 10.34740/kaggle/dsv/10240420
title: Top Spotify Songs in 73 Countries (Daily Updated)
DOI: 10.6084/m9.figshare.c.3907102_d7
title: Additional file 3: of Enrichment allows identification of diverse, rare elements in metagenomic resistome-virulome sequencing

description: File S2. Classification of genes at the class, mechanism and group levels. (CSV 764Â kb)
DOI: 10.6084/m9.figshare.c.3907153_d9
title: Additional file 8: Table S5. of Rhodopsin gene copies in Japanese eel originated in a teleost-specific genome duplication

description: Substitution models employed in ML phylogenetic tree search. (XLS 28 kb)
DOI: 10.6084/m9.figshare.c.3907132_d9
title: Additional file 9: Tables of An analysis of 67 RNA-seq datasets from various tissues at different stages of a model insect, Manduca sexta

description: S7, S8 and S9. Z-score of high-expressed genes in OGS2.0 (Table S7), Cufflinks4.0 (Table S8), and MCOT1.0 (Table S9). Z-scores of genes with at least one FPKM value over 100 were calculated. The genes are in the same order as in Fig. 7, Additional file 2: Figure S1A and S1B, respectively. (XLSX 5418 kb)