cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26078/xr1d-ra13
title: Technology Belmont Data

description: The data is based on semi-structured household interviews conducted in Noatak (n = 12), Noorvik (n = 11), and Brevig Mission (n = 12) in the March of 2017. Information gathered consists of individuals use of technology, perceptions about how technology has helped or hindered their ability to do subsistence and address the changing climate, and the role of technology in the community. Demographic information includes gender, race, education, household size, and employment status. Individuals who were particularly knowledgeable and amendable participated in a q-sort exercise to assess values and beliefs regarding technology in their community. Individual records are confidential and protected under the University of Alaska Institutional Review Board (#780494).
DOI: 10.6073/pasta/18d534bd8803d4a75da37613878fa1ee
title: Survey of Family Forest Owners Regarding Invasive Insects in the Connecticut River Watershed 2017

description: Forest insects have significant direct impacts on forest ecosystems; they are also generating new risks, uncertainties, and opportunities for forest landowners. Our research objective is to understand: (1) whether and how insect infestations are shifting land-use regimes in New England by altering human decision-making, (2) how these changes to human decisions may affect regional forest ecosystems and the provisioning of select ecosystem services, and (3) how subsequent changes to forest ecosystems, in turn, affect landowners. The dataset is a result of gathering information from a random sample of family forest owners (FFOs) in the Connecticut River Watershed; FFOs own approximately half of the private forestland in the region. We collected information on characteristics and perceptions of these FFOs as well as their intentions for their land if faced with the presence or threat of invasive forest insects. To better understand FFO intentions, contingent behavior questions populate the conjoint analysis format of the questionnaire. These are the foundational data that form our further efforts to simulate the impacts of insect dynamics and landowner behavior on regional forest ecosystems, including forest carbon stores, forest structure and composition, and timber yields. One of our overarching hypotheses is that forest land-use change in response to insects will have greater near-term ecological consequences than climate change or insects by themselves.
DOI: 10.26078/bw6e-q358
title: TDIM ionospheric model TEC, hmF2, and NmF2 at mid-latitude northern hemisphere, used in the paper titled "Is TEC a Viable Servo Input?"

description: The externally imposed vertical drift in the F region is an extremely important driver of ionospheric dynamics but is very difficult to measure or map. Ionospheric servo algorithms have used hmF2 as F-region observable to infer the vertical drift. However, an even more plentiful observable is the total electron content (TEC) whose coverage over northern mid-latitudes has both spatial and temporal availability that matches those of the probable mechanisms responsible for vertical drift dynamics.

This ionospheric, first principle physics, study shows that TEC is a viable servo parameter at mid-latitudes in the noon sector. The servo relationship is shown to be linear over at least one hour for vertical drifts between + 100 m/s. Simulations over a full range of seasons and the solar cycle confirm the linear relationship between TEC and vertical drift with changing linear rate coefficients. These simulation results are dependent upon the vertical drift adopted to generate a baseline ionosphere from which the servo simulations evolve. Thus this type of TEC servo would generate relative vertical drifts. These, in turn, would create latitude-longitude maps of the vertical drift dynamics.
DOI: 10.7795/720.20210611
title: Collection of spectra of direct photons recorded in ISO neutron fields

description: Compilation of prompt photon spectra recorded in ISO neutron fields produced at PIAF (PTB accelerator facility) by using a 1.5'' x 1.5'' CeBr3 detector. This data set is an appendix to the article “Quantitative investigation of gamma radiation in accelerator produced ISO neutron fields” by H. Dombrowski and R. Nolte. The spectra are depicted in this article. The time-of-flight method was used to detect direct photons. By performing shadow cone measurements, a background subtraction was performed. In addition, the random background was subtracted. The latter consists of net spectra (likewise foreground minus shadow cone background spectra), which were recorded using a time-of-flight window located earlier on the timeline than the arrival of the prompt photons.
DOI: 10.26078/fgmq-bm18
title: Genetic variation at the species and population levels in the Rocky Mountain ridged mussel (Gonidea angulata) – Supplementary Material

description: Freshwater mussels in western North America are threatened by water diversions, climate change, loss of required host fish, and other factors, and have experienced marked decline in the past several decades. All four of the primary lineages (potentially species) of freshwater mussels in the western U.S. and Canada are widespread and have somewhat generalist host fish requirements. Of these lineages, perhaps the most poorly understood and of greatest conservation concern is Gonidea angulata (Rocky Mountain ridged mussel). Gonidea is a monotypic genus occurring only in the western continental U.S. and southern Canada. Here we describe the patterns of genetic variation across the species range, including several populations in the Okanagan Valley at the northern edge of the range. We detected only ten mitochondrial cytochrome oxidase I haplotypes, three of which are commonly found across major hydrologic basins, and the remainder of which were basin-specific variants. Haplotypes differed by a maximum of 5 of 537 nucleotides. New microsatellite loci were developed for G. angulata as a part of this study. Data from these microsatellite loci indicated that the population in the Chehalis River, Washington, was distinct from other locations, and that the Okanagan lake population was somewhat diverged from the remaining populations in the Columbia River and Klamath Lake. Only low levels of inbreeding were detected, in contrast to previous findings in Margartifera falcata, suggesting that hermaphroditism is not common. The population with the least diversity, according to microsatellite data, was the northern-most known population in Okanagan Lake. We discuss the biogeographic and conservation implications of our findings and provide supplementary material of our research including sequencing data and narrative of microsatellite development.
DOI: 10.6073/pasta/3fd35fe494aeecbd84c4a51f766f363b
title: Species Distribution Modeling of Carnivorous Plants Worldwide

description: Forecasting how carnivorous plant species will respond to climatic change is a key issue in their conservation and management but presents a number of challenges. These challenges derive from interactions between the relatively simplistic statistical methods typically used to forecast species responses to climatic change, which to date have been limited mainly to species distribution models (“SDMs) and particular aspects of the ecology of carnivorous plants, including their rarity, habitat specialization, and limited dispersal ability. The small ranges and oftentimes low local abundance of carnivorous plants provide few occurrence records, which increase the potential for poorly or over-fitted SDMs and misspecification of relationships with their “optimal” environments. The unique habitats in which carnivorous plants often grow also are difficult to characterize using the basic temperature and precipitation data that often undergird SDMs. Rather, habitats in which carnivorous plants are common often are decoupled from broader climatic patterns (e.g., many retain high soil moisture even during seasonal drought) and may be associated with frequent disturbance. Last, dispersal limitation also may constrain range shifts of carnivorous plants as the climate changes. These three issues raise two related questions that are critical for understanding and forecasting the future of carnivorous plants. First, to what extent are current carnivorous plants distributions constrained by climate; and second, how readily, if at all, might carnivorous plants disperse to colonize new habitat as it becomes climatically suitable? We estimated the vulnerability of carnivorous plants to climatic change in light of challenges identified with SDMs in general and their particular application to these unique species. We combined two approaches: “ensembles of small models”, which attempt to deal with the challenges of fitting SDMs for data-limited species; and “bioclimatic velocity”, which is an estimate of how fast a species would have to migrate to track its climatic niche, to provide initial assessments of the vulnerability of carnivorous plants to climatic change. We also explored, for one carnivorous plant (Sarracenia purpurea) how to additionally incorporate demographic complexity into its SDM.
DOI: 10.7795/720.20210126
title: Additional data for the publication "Optical frequency ratio of a <sup>171</sup>Yb<sup>+</sup> single-ion clock and a <sup>87</sup>Sr lattice clock"

description: The enclosed data set provides additional data on the measurements presented in the publication entitled "Optical frequency ratio of a <sup>171</sup>Yb<sup>+</sup> single-ion clock and a <sup>87</sup>Sr lattice clock" in Metrologia (DOI: 10.1088/1681-7575/abc86f).
description: EMPIR projects are co-funded by the European Union’s (EU) Horizon 2020 research and innovation programme and the EMPIR participating states.
DOI: 10.6073/pasta/4451af8ba5b6e1af429da0d82329e884
title: Hysteresis of the Sarracenia Purpurea Microecosystem in Northern Vermont 2015-2016

description: The restoration of plant and animal communities damaged by chronic detrital or nutrient enrichment is a long-standing environmental problem. In a replicated greenhouse experiment with the aquatic microbial community that inhabits the cup-shaped leaves of the carnivorous pitcher plant Sarracenia purpurea, we monitored O2 levels and the concentration of bovine serum album (BSA), an effective molecular substitute for detritus. Low BSA enrichment rates triggered a classic hysteresis response, a substantial lag in the return of O2 levels. At intermediate BSA enrichment rates, O2 levels closely tracked BSA concentrations during both the enrichment and recovery phases. High BSA enrichment rates induced an unusual "anti-clockwise" hysteresis in which O2 levels were higher during the recovery phase than during the enrichment phase. These experiments revealed complex dynamic behavior in response to enrichment rates of a single environmental driver. Our results suggest that the past trajectory of enrichment is critical for understanding how systems will respond to restoration initiatives. Specifically, systems that have been exposed to chronic low levels of enrichment may be the ones that are most resistant to restoration efforts that reduce nutrient or detrital inputs.
DOI: 10.25810/fqnh-b493
title: Media and Climate Change Observatory Monthly Summary: This is not your grandparents’ climate - Issue 54, June 2021 

description:         June media attention to climate change or global warming increased 26% at the global level from the previous month of May. Comparing the first six months (January-June) of 2020 to the first six months of 2021, coverage around the world has increased 27%. In fact, levels of coverage increased in all media and locations in June from the previous month of May and from June 2020 with one exception: Denmark (where coverage dropped 15% from May 2021). Figure 1 shows trends in newspaper media coverage at the global scale – organized into seven geographical regions around the world – from January 2004 through June 2021.
DOI: 10.6073/pasta/7250b11b09301501d4e9087c718f8548
title: Assessing Plant Phenological Character Displacement Across the Eastern United States Since 1895

description: Reproductive character displacement has long been hypothesized to be a key determinant of speciation and co-existence in flowering plants. A central tenet of this hypothesis is that reproductive traits of close relatives growing in sympatry diverge more than they do where close relatives do not grow together. However, this idea remains untested across taxa and at large spatial scales. Here, we use data collected from tens of thousands of herbarium specimens to examine evidence for character displacement in flowering time for 91 closely-related pairs of animal-pollinated angiosperm species in the eastern USA. We see no evidence for overall phenological divergence in sympatry across regions, clades, or life histories. Rather our results indicate widespread convergence of flowering times in sympatry for species pairs that generally tend to flower close in time. We also find that climate change could alter the nature of these convergent flowering events by shifting them further apart in a majority species pair comparisons. Specifically, congeneric species in New England and the Atlantic Coastal Plain are projected to flower 2–4 days further apart, on average, by the mid-21st century as warming temperatures drive species-specific phenological shifts within genera. This may have significant consequences for species interactions and gene flow, especially if current sympatric convergence in flowering times has resulted from facilitative interactions between species.
DOI: 10.25810/fq7x-q521.19
title: Middle Eastern Newspaper Coverage of Climate Change or Global Warming, 2004-2021 - June 2021

description:         The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.26078/8nv8-yj03
title: Transonic Small-Disturbance Theory/Integral Boundary Layer Airfoil Data for the Low-Fidelity Common Research Model

description: Lift, Drag, and Moment Coefficient data for the Low-Fidelity Common Research Model wing airfoil sections.
DOI: 10.26078/zerj-b751
title: Data from: Anomalous Electron Temperature

description: Anomalous Electron Temperatures in the evening equatorial ionosphere. These are outputs of simulations from the semi-empirical SAMI2-PE (Varney et al. 2012) for the night of the 02 and 05 August 2011.
DOI: 10.6073/pasta/769b07984d9a57eb6fd11e44628292ee
title: Evaluation of Mask R-CNN Model for Counting Reproductive Structures of Six Plant Species 1895-2018

description: Phenology––the timing of life-history events––is a key trait for understanding responses of organisms to climate. The digitization and online mobilization of herbarium specimens is rapidly advancing our understanding of plant phenological response to climate and climatic change. The current common practice of manually harvesting data from individual specimens greatly restricts our ability to scale data collection to entire collections. Recent investigations have demonstrated that machine-learning models can facilitate data collection from herbarium specimens. However, present attempts have focused largely on simplistic binary coding of reproductive phenology (e.g., flowering or not). Here, we use crowd-sourced phenological data of numbers of buds, flowers, and fruits of more than 3000 specimens of six common wildflower species of the eastern United States (Anemone canadensis, A. hepatica, A. quinquefolia, Trillium erectum, T. grandiflorum, and T. undulatum} to train a model using Mask R-CNN to segment and count phenological features. A single global model was able to automate the binary coding of reproductive stage with greater than 90% accuracy. Segmenting and counting features were also successful, but accuracy varied with phenological stage and taxon. Counting buds was significantly more accurate than flowers or fruits. Moreover, botanical experts provided more reliable data than either crowd-sourcers or our Mask R-CNN model, highlighting the importance of high-quality human training data. Finally, we also demonstrated the transferability of our model to automated phenophase detection and counting of the three Trillium species, which have large and conspicuously-shaped reproductive organs. These results highlight the promise of our two-phase crowd-sourcing and machine-learning pipeline to segment and count reproductive features of herbarium specimens, providing high-quality data with which to study responses of plants to ongoing climatic change.
DOI: 10.5517/ccdc.csd.cc1n5g1b
title: CCDC 1524581: Experimental Crystal Structure Determination

description: Related Article: Ayon Kanti Ghosh, Hare Ram Yadav, Angshuman Roy Choudhury, N Duraipandian, Manikantan Symala Kiran, Rajarshi Ghosh|2017|Indian J.Chem.,Sect.A:Inorg.,Bio-inorg.,Phys.,Theor.Anal.Chem.|56A|616|
DOI: 10.5517/ccdc.csd.cc1n0j17
title: CCDC 1519838: Experimental Crystal Structure Determination

description: Related Article: Ayon Kanti Ghosh, Hare Ram Yadav, Angshuman Roy Choudhury, N Duraipandian, Manikantan Symala Kiran, Rajarshi Ghosh|2017|Indian J.Chem.,Sect.A:Inorg.,Bio-inorg.,Phys.,Theor.Anal.Chem.|56A|616|
DOI: 10.5517/ccdc.csd.cc27l1tq
title: CCDC 2072933: Experimental Crystal Structure Determination

description: Related Article: Shaonan Liu|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27l1vr
title: CCDC 2072934: Experimental Crystal Structure Determination

description: Related Article: Shaonan Liu|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27ldt2
title: CCDC 2073274: Experimental Crystal Structure Determination

description: Related Article: Liping Song|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27lgv5
title: CCDC 2073337: Experimental Crystal Structure Determination

description: Related Article: Kamakshya Nath panda|2021|CSD Communication|||
DOI: 10.15468/5tx4vc
title: On Afrauropus and Monodauropus, two African genera of Pauropoda (Myriapoda)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Scheller, Ulf (2008): On Afrauropus and Monodauropus, two African genera of Pauropoda (Myriapoda). Zoosystema 30 (4): 795-798, DOI: http://doi.org/10.5281/zenodo.4689998
DOI: 10.5517/ccdc.csd.cc27lv6x
title: CCDC 2073689: Experimental Crystal Structure Determination

description: Related Article: Mohammed Chalkha, Abdelfattah El Moussaoui, Taibi Ben Hadda, Malika Berredjem, Abdeslem Bouzina, Faisal A. Almalki, Hamza Saghrouchni, Mohamed Bakhouch, Mohamed Saadi, Lahcen El Ammari, Mohamed El Yazidi|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27lvg5
title: CCDC 2073697: Experimental Crystal Structure Determination

description: Related Article: Naokazu Yoshikawa|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27mk0g
title: CCDC 2074365: Experimental Crystal Structure Determination

description: Related Article: H.Kooijman, A.L.Spek|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27mpxh
title: CCDC 2074517: Experimental Crystal Structure Determination

description: Related Article: Bikshandarkoil Srinivasan, Sudesh M. Morajkar, Megha S. Deshpande|2021|CSD Communication|||
DOI: 10.25345/c5vg1g
title: MassIVE MSV000087930 - GNPS 080221 pasteurization positive
title: Samples from soy plant containing small molecules and volatiles extracted with acetonitrile
DOI: 10.25345/c5qr8n
title: MassIVE MSV000087931 - GNPS 080221 pasteurization negative
title: samples of small molecules from soy extracted with acetonitrile
DOI: 10.6084/m9.figshare.15091494
title: Gene name to ID conversion

description: contains 2 columns:gene, ENSEMBL gene IDgeneName, common gene name
DOI: 10.5281/zenodo.5153660
title: Partitioned linkage disequilibrium scores for active regulatory elements in ROADMAP datasets

description: Partitioned linkage disequilibrium scores for active regulatory elements in ROADMAP epigenomics datasets, to accompany paper Lynall et al 2021 Accompanying code available at https://github.com/maryellenlynall/psychimmgen2021 Active regulatory elements annotations are a union of the following IDEAS annotations, representing enhancers and active promoters (see http://bx.psu.edu/~yuzhang/Roadmap_ideas/trackDb_test.txt for IDEAS track hubs): 4_Enh<br> 6_EnhG<br> 8_TssAFlnk<br> 10_TssA<br> 14_TssWk<br> 17_EnhGA tissues.txt provides the list of ROADMAP tissues The partitioned_LD_scores folder contains partitioned LD scores in a format suitable for stratified LDSC analysis for European participants
DOI: 10.5281/zenodo.5153628
title: Harbert_Lab_SURE2021

description: Research data for Summer Undergraduate Research Experience program research 2021
DOI: 10.5281/zenodo.5068089
title: Harbert_Lab_SURE2021

description: Research data for Summer Undergraduate Research Experience program research 2021
DOI: 10.6073/pasta/e5c3b7811624d4590ff11de46d1eb4b2
title: 2003 Prescribed Burn Effect on Chihuahuan Desert Grasses and Shrubs at the Sevilleta National Wildlife Refuge, New Mexico: Grass Recovery Study (2003-2018)

description: The U.S. Fish and Wildlife's plan to apply a prescribed burn to a large portion of McKenzie Flats was deemed an opportunity to study the effects of fire on vegetation at the boundary between shrubland and grassland. This study actually was undertaken on an area that had prescribed fire applied to 8 of 16 (300 m x 300 m) plots 10 years before in 1993. This previous study had also examined the effects of fencing to exclude the indigenous prong-horn antelope. In the 2003 study the prescribed fire was applied to the northeastern half of the 16 plots while the southwestern plots were intentionally protected. Sampling prior to the prescribed burn included quantification of cover of grass species in quadrats within all of the 16 plots. Measurements were made using "niner" quadrat frames that are 30 cm x 30 cm frames that are divided into 9 1-decimeter squares. Counts of grass species were made just prior to the June 2003 burn. Following the prescribed burn, quadrats were remeasured in the fall of 2003 to quantify mortality of grass species. These measurements were taken through the fall of 2012 and the fall of 2018. Measurements were not taken for 2014-2017.
DOI: 10.6073/pasta/705e3108a3fa459d24b1072713b81b5b
title: 2003 Prescribed Burn Effect on Chihuahuan Desert Grasses and Shrubs at the Sevilleta National Wildlife Refuge, New Mexico: Grass Recovery Study (2003-2018)

description: The U.S. Fish and Wildlife's plan to apply a prescribed burn to a large portion of McKenzie Flats was deemed an opportunity to study the effects of fire on the vegetation at the boundary between shrubland and grassland. This study actually was undertaken on an area that had prescribed fire applied to 8 of 16 (300 m x 300 m) plots 10 years before in 1993. This previous study had also examined the effects of fencing to exclude the indigenous prong-horn antelope. In the 2003 study the prescribed fire was applied to the northeastern half of the 16 plots while the southwestern plots were intentionally protected. Sampling prior to the prescribed burn included quantification of fuel load (ie. the standing biomass of all grasses and forbs in the area to be burned). These measurements were made using Daubenmire quadrat frames that are 5 cm x 20 cm and delineate a 0.1 square meter area. Four samples were taken adjacent to the six 3 m x 4 m quadrats in each of the eight plots that were to be burned. Quadrat frames were laid down over the vegetation and all vegetation rooted within the frame was clipped at ground level. This material was bagged, oven-dried and weighed. Following the prescribed burn, re-measurements were made every fall of from 2004 until 2012 when vegetation had reached its annual peak biomass. Data were not collected from 2014-2017, but were collected again in 2018.