cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.arq3z4
title: Occurrence Download

description: A dataset containing 4683 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Desmanthus illinoensis (Michx.) MacMill. ex B.L.Rob. & Fernald",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4683 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100194-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ecznnc
title: Occurrence Download

description: A dataset containing 598 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Lamprotornis shelleyi",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 598 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074314-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b53qqr
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Living Specimen, Occurrence evidence)",
 "Geometry POLYGON((30.81679069302328 -2.427828372087533,30.839375007798445 -2.427828372087533,30.839375007798445 -2.405244057312367,30.81679069302328 -2.405244057312367,30.81679069302328 -2.427828372087533))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 1980-2022"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126108-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uwww8g
title: Occurrence Download

description: A dataset containing 2519 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Lamprotornis unicolor",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 2519 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074318-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmxb9e
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-87.6451447000000030 41.7357773000000023, -87.6451447000000030 41.7374328900000009, -87.6451447000000030 41.7393142399999988, -87.6451447000000030 41.7407440699999981, -87.6451447000000030 41.7417976199999998, -87.6451447000000030 41.7434532099999984, -87.6451447000000030 41.7441304999999971, -87.6433307300000024 41.7441304999999971, -87.6418946699999992 41.7441304999999971, -87.6396272100000004 41.7441304999999971, -87.6375864999999976 41.7441304999999971, -87.6375864999999976 41.7434532099999984, -87.6375864999999976 41.7420233899999999, -87.6375864999999976 41.7411955899999967, -87.6375864999999976 41.7398410200000001, -87.6375864999999976 41.7390132199999968, -87.6375864999999976 41.7375081400000028, -87.6375864999999976 41.7357773000000023, -87.6394760499999990 41.7357773000000023, -87.6406853600000062 41.7357773000000023, -87.6426504899999941 41.7357773000000023, -87.6436330599999991 41.7357773000000023, -87.6451447000000030 41.7357773000000023))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 20 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087633-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gtgrkn
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Primula veitchiana Petitm."
 ]
}

 The dataset includes 87 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095309-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9dtdxx
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Indonesia)",
 "BasisOfRecord is one of (Specimen)",
 "Year is greater than or equal to 1900",
 "TaxonKey is Lissachatina fulica (Bowdich, 1822)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087638-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xc46kk
title: Occurrence Download

description: A dataset containing 2300 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Rankinia diemensis (Gray, 1841))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2300 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044435-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wm4gqa
title: Occurrence Download

description: A dataset containing 14009 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cannabis sativa L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14009 records from 393 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096925-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5tad46
title: Occurrence Download

description: A dataset containing 6452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Lamprotornis splendidus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 6452 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074321-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ctcmq9
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tomopleura nivea (R.A.Philippi, 1851)"
 ]
}

 The dataset includes 140 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100172-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.peuhas
title: Occurrence Download

description: A dataset containing 16635 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Lamprotornis purpuroptera",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 16635 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074316-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v6y62m
title: Occurrence Download

description: A dataset containing 639 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ficus subintermedia (d'Orbigny, 1852)"
 ]
}

 The dataset includes 639 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087643-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8av8jj
title: Occurrence Download

description: A dataset containing 2051 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Laniarius aethiopicus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 2051 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074324-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bxa5f9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is one of (Oedogonium plagiostomum Wittr. ex Hirn var. tanaiticum Y.V. Roll, Oedogonium plagiostomum var. tanaiticum, , , , , )",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Country is Ukraine"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0128813-230530130749713/datasets/export for details.
DOI: 10.15468/dl.8ruyet
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-84.1182613999999944 40.7448565999999985, -84.1182613999999944 40.7466027600000018, -84.1182613999999944 40.7486399399999968, -84.1182613999999944 40.7514046800000003, -84.1182613999999944 40.7534418700000032, -84.1182613999999944 40.7566431500000022, -84.1182613999999944 40.7594078999999994, -84.1150544900000057 40.7594078999999994, -84.1114099600000031 40.7594078999999994, -84.1073281000000037 40.7594078999999994, -84.1042666999999966 40.7594078999999994, -84.1001851000000045 40.7594078999999994, -84.1001851000000045 40.7578072599999999, -84.1001851000000045 40.7556245600000011, -84.1001851000000045 40.7540239200000016, -84.1001851000000045 40.7518412200000029, -84.1001851000000045 40.7490764799999994, -84.1001851000000045 40.7463117300000022, -84.1001851000000045 40.7448565999999985, -84.1044124799999935 40.7448565999999985, -84.1089316900000057 40.7448565999999985, -84.1133051200000068 40.7448565999999985, -84.1163665199999997 40.7448565999999985, -84.1182613999999944 40.7448565999999985))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096916-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ur6vvg
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acutotyphlops infralabialis (Waite, 1918))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044472-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4mvfz
title: Occurrence Download

description: A dataset containing 6153 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Data on macrophyte diversity in rivers and streams of the Vologda Region and several other regions of Russia"
 ]
}

 The dataset includes 6153 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100182-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xmzs3d
title: Occurrence Download

description: A dataset containing 615 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tonna canaliculata (Linnaeus, 1758)"
 ]
}

 The dataset includes 615 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100192-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ysk59j
title: Occurrence Download

description: A dataset containing 24679 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Oregon Bee Atlas Survey Data: 2019"
 ]
}

 The dataset includes 24679 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044497-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.khkrr3
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ramphotyphlops becki (Tanner, 1948))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044513-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11071944
title: geco-bern/leafnp_data: v1.0: Initial release

description: leafnp_data


This repository contains the leaf Nmass, Pmass, and N:P data (data/leafnp_tian_et_al.csv), based on Tian et al. (2019), complemented by environmental covariates. The code for complementing the original data by Tian et al. (2019) is contained in this repository and is used for the analysis and modelling for the article Tian et al. (in prep.). Code for the data analysis and modelling is contained in a separate repository leafnp.



Workflow


To reproduce the data generation, follow these steps:



Obtain the original data from Tian et al. (2019) (follow link provided therein) and place it locally. In code used here, the file is lives at data-raw/global_leaf_NP_total_Di_20210224.csv.

Complement data: analysis/01_complement_environment.R (copied from leafnp/analysis/leafnp.R of the stineb/leafnp repository)

Complement missing environmental data: analysis/02_complement_environment_missing.R (copied from leafnp/analysis/leafnp_complement_missing.R of the stineb/leafnp repository)


The code relies on the custom R package {ingestr}. Install it from github, available here.

The final file, produced and contained by this repository, is:

data/leafnp_tian_et_al.csv



Repository structure




Folder analysis


Contains scripts (see Workflow above).



Folder data-raw


Contains files needed to compile the final file.



Folder data


Contains files produced by code of this repo (files not contained by this repo).



Folder vignettes


Contains a vignette showcasing the data.



References


Tian, D., Kattge, J., Chen, Y., Han, W., Luo, Y., He, J., Hu, H., Tang, Z., Ma, S., Yan, Z., Lin, Q., Schmid, B., and Fang, J.: A global database of paired leaf nitrogen and phosphorus concentrations of terrestrial plants, Ecology, 100, e02812, https://doi.org/10.1002/ecy.2812, 2019.

Di Tian, Zhengbing Yan, Bernhard Schmid, Jens Kattge, Jingyun Fang, Benjamin D. Stocker: Environmental versus phylogenetic controls on leaf nitrogen and phosphorous concentrations of terrestrial plants. (in review)
DOI: 10.15468/dl.hkadtb
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chondracanthus merluccii (Holten, 1802)"
 ]
}

 The dataset includes 74 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115505-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11071943
title: geco-bern/leafnp_data: v1.0: Initial release

description: leafnp_data


This repository contains the leaf Nmass, Pmass, and N:P data (data/leafnp_tian_et_al.csv), based on Tian et al. (2019), complemented by environmental covariates. The code for complementing the original data by Tian et al. (2019) is contained in this repository and is used for the analysis and modelling for the article Tian et al. (in prep.). Code for the data analysis and modelling is contained in a separate repository leafnp.



Workflow


To reproduce the data generation, follow these steps:



Obtain the original data from Tian et al. (2019) (follow link provided therein) and place it locally. In code used here, the file is lives at data-raw/global_leaf_NP_total_Di_20210224.csv.

Complement data: analysis/01_complement_environment.R (copied from leafnp/analysis/leafnp.R of the stineb/leafnp repository)

Complement missing environmental data: analysis/02_complement_environment_missing.R (copied from leafnp/analysis/leafnp_complement_missing.R of the stineb/leafnp repository)


The code relies on the custom R package {ingestr}. Install it from github, available here.

The final file, produced and contained by this repository, is:

data/leafnp_tian_et_al.csv



Repository structure




Folder analysis


Contains scripts (see Workflow above).



Folder data-raw


Contains files needed to compile the final file.



Folder data


Contains files produced by code of this repo (files not contained by this repo).



Folder vignettes


Contains a vignette showcasing the data.



References


Tian, D., Kattge, J., Chen, Y., Han, W., Luo, Y., He, J., Hu, H., Tang, Z., Ma, S., Yan, Z., Lin, Q., Schmid, B., and Fang, J.: A global database of paired leaf nitrogen and phosphorus concentrations of terrestrial plants, Ecology, 100, e02812, https://doi.org/10.1002/ecy.2812, 2019.

Di Tian, Zhengbing Yan, Bernhard Schmid, Jens Kattge, Jingyun Fang, Benjamin D. Stocker: Environmental versus phylogenetic controls on leaf nitrogen and phosphorous concentrations of terrestrial plants. (in review)
DOI: 10.15468/dl.rn4fj9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-87.6435515000000009 41.7213295000000031, -87.6435515000000009 41.7218752100000003, -87.6435515000000009 41.7229666300000019, -87.6435515000000009 41.7241126199999997, -87.6435515000000009 41.7255314700000000, -87.6435515000000009 41.7267865999999970, -87.6422385000000048 41.7267865999999970, -87.6414725099999998 41.7267865999999970, -87.6403782299999961 41.7267865999999970, -87.6395028000000025 41.7267865999999970, -87.6385726599999941 41.7267865999999970, -87.6375878099999994 41.7267865999999970, -87.6365482399999962 41.7267865999999970, -87.6350711000000047 41.7267865999999970, -87.6350711000000047 41.7260226100000011, -87.6350711000000047 41.7250403299999988, -87.6350711000000047 41.7243309099999991, -87.6350711000000047 41.7231303399999973, -87.6350711000000047 41.7222026399999990, -87.6350711000000047 41.7213295000000031, -87.6360558100000020 41.7213295000000031, -87.6374783800000046 41.7213295000000031, -87.6387368000000038 41.7213295000000031, -87.6395575100000030 41.7213295000000031, -87.6408706499999965 41.7213295000000031, -87.6420743599999952 41.7213295000000031, -87.6435515000000009 41.7213295000000031))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087637-220831081235567/datasets/export for details.
DOI: 10.15468/dl.fjuq5h
title: Occurrence Download

description: A dataset containing 37053 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Boraginales"
 ]
}

 The dataset includes 37053 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044459-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zcan46
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-86.2500943999999947 41.6504630000000020, -86.2500943999999947 41.6525370000000024, -86.2500943999999947 41.6545018500000026, -86.2500943999999947 41.6555934300000033, -86.2500943999999947 41.6575582700000027, -86.2500943999999947 41.6598505899999978, -86.2500943999999947 41.6613788000000014, -86.2482359699999961 41.6613788000000014, -86.2456120700000071 41.6613788000000014, -86.2433161499999983 41.6613788000000014, -86.2399269400000037 41.6613788000000014, -86.2375217000000021 41.6613788000000014, -86.2357726000000042 41.6613788000000014, -86.2357726000000042 41.6594139600000020, -86.2357726000000042 41.6574491100000017, -86.2357726000000042 41.6561392200000000, -86.2357726000000042 41.6542835300000007, -86.2357726000000042 41.6518820499999975, -86.2357726000000042 41.6504630000000020, -86.2380683399999981 41.6504630000000020, -86.2394896299999942 41.6504630000000020, -86.2415668799999935 41.6504630000000020, -86.2437534700000015 41.6504630000000020, -86.2469240199999945 41.6504630000000020, -86.2500943999999947 41.6504630000000020))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 54 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090181-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.