cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17651092
title: Code from: Rapid establishment of waterbird prey populations in newly created wetlands

description: This data details the R code and figures for the manuscript under the preliminairy title: Rapid establishment of waterbird prey populations in newly created wetlands. This manuscript is to be submitted to Restoration Ecology for their call for papers titled: Cultivating the Living Laboratory Concept through Wetland Restoration. The dataset contains all the code in an R markdown (.Rmd) file and the compiled HTML version of the code as well as two seperate R code files for helper functions. In addition the repository contains high resolution files of all the figures for the manuscript. The data files for macroinvertebrate abundances and biomasses as well as bird counts are added as .csv files.
DOI: 10.5281/zenodo.17643512
title: Podatki izvedbe ankete - Novi pristopi zgoščevnaja

description: Ministrstvo za narvne vire in prostor Rebublike Slovenije, v sodelovnaju z Urbanističnim inštitutom Rebubliek Slovenije, v letu 2025 izvaja projekt "Novi prisotpi zgoščevnaja" v povezavi s kakovostjo bivanja in klimatskimim spremembami. V okviru projekta je bila izvedena anketa med občinami, podatki zbrani v anketi so v priloženi datoteki.
DOI: 10.5281/zenodo.17643513
title: Podatki izvedbe ankete - Novi pristopi zgoščevnaja

description: Ministrstvo za narvne vire in prostor Rebublike Slovenije, v sodelovnaju z Urbanističnim inštitutom Rebubliek Slovenije, v letu 2025 izvaja projekt "Novi prisotpi zgoščevnaja" v povezavi s kakovostjo bivanja in klimatskimim spremembami. V okviru projekta je bila izvedena anketa med občinami, podatki zbrani v anketi so v priloženi datoteki.
DOI: 10.15468/dl.4wbwe2
title: Occurrence Download

description: A dataset containing 3585 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Catochrysops strabo"
 ]
}

 The dataset includes 3585 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045414-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wke6vv
title: Occurrence Download

description: A dataset containing 36175 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Quaid-i-Azam University Herbarium"
 ]
}

 The dataset includes 36175 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045413-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8kbyj9
title: Occurrence Download

description: A dataset containing 314281 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (France, Guadeloupe, Martinique, Saint Martin (French part), Saint Barthélemy, Saint Pierre and Miquelon, French Guiana, French Southern Territories, Mayotte, Réunion, French Polynesia, New Caledonia, Wallis and Futuna)",
 "Geometry POLYGON((4.77358 45.5856,4.66466 45.54324,4.57148 45.50848,4.50009 45.45673,4.5134 45.39218,4.61384 45.33351,4.78084 45.31224,4.75542 45.38453,4.76752 45.45079,4.87281 45.5229,4.77358 45.5856))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 314281 records from 606 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045374-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5285/acae99ba-b088-4544-9c48-71d70498c16f
title: Viable bioaerosol and particulate data from four sites representing different levels of endotoxin exposure in south east England, 2016-2018

description: The dataset was collected between 2016-2018. A range of different environments were sampled including urban and rural sites in the South East of England, a compost facility in the East of England and a chicken farm in the South East of England. At each site viable bioaerosols (total bacteria, gram negative bacteria and fungi), endotoxin and particulates were measured. 
description: The dataset was generated according to accepted protocols as detailed in the supporting documentation. Pumps for the Andersen samplers were tested before each sampling day using inline flow meters. The Osiris particulate counter is serviced and recalibrated yearly as advised by the manufacturer. All equipment and filters for endotoxin analysis were depyrogenated before use. Controls included analysing unexposed filters and filters that were placed on the Andersen without the pumps running to check for contamination.
DOI: 10.5518/304
title: Information Associated with ‘Intelligent Support for Exploration of Data Graphs’ (PhD thesis)

description: Examples of interface codes and materials from experimental user studies used in the PhD thesis. An example of how to connect to a triple store and extract the class hierarchy is described. Examples that describe how to extract the closest knowledge anchor and how to use the closest knowledge anchor in generating the narrative scripts of an exploration path are also included. The set of knowledge anchors and human basic level objects identified in MusicPinta and L4All datasets are included. Examples of the generated exploration paths in MusicPinta are included.
DOI: 10.6084/m9.figshare.28775117
title: Relative individualized acceleration intensity thresholds

description: All information on the research can be found in the corresponding article.
DOI: 10.6084/m9.figshare.28775117.v1
title: Relative individualized acceleration intensity thresholds

description: All information on the research can be found in the corresponding article.
DOI: 10.5281/zenodo.17651032
title: Understanding the Human Side of LLM-Assisted Software Development: Evidence from a Requirements Specification Experiment

description: This replication package accompanies the paper “Understanding the Human Side of LLM-Assisted Software Development: An Experiment Based on a Requirements Specification Task” submitted to Empirical Software Engineering (EMSE).

It contains anonymized data, scripts, and materials necessary to replicate the analyses and findings reported in the paper. The package includes:





Quantitative data files (.sav, .spv) for statistical analyses (Shapiro–Wilk, t-tests, Wilcoxon, effect sizes)




Qualitative interview transcripts and coding files




Demographic and experimental forms




Analysis outputs and replication guide



Please refer to the included README file for detailed folder descriptions and instructions.
DOI: 10.5281/zenodo.17651033
title: Understanding the Human Side of LLM-Assisted Software Development: Evidence from a Requirements Specification Experiment

description: This replication package accompanies the paper “Understanding the Human Side of LLM-Assisted Software Development: An Experiment Based on a Requirements Specification Task” submitted to Empirical Software Engineering (EMSE).

It contains anonymized data, scripts, and materials necessary to replicate the analyses and findings reported in the paper. The package includes:





Quantitative data files (.sav, .spv) for statistical analyses (Shapiro–Wilk, t-tests, Wilcoxon, effect sizes)




Qualitative interview transcripts and coding files




Demographic and experimental forms




Analysis outputs and replication guide



Please refer to the included README file for detailed folder descriptions and instructions.
DOI: 10.5281/zenodo.14009840
title: Four-dimensional phase space tomography from one-dimensional measurements of a hadron beam

description: Data and analysis for "Four-dimensional phase space tomography from one-dimensional measurements of a hadron beam", published in Physical Review Accelerators and Beams.

 

Up-to-date implementation of MENT: https://github.com/austin-hoover/ment
DOI: 10.5281/zenodo.14807780
title: Four-dimensional phase space tomography from one-dimensional measurements of a hadron beam

description: Data and analysis for "Four-dimensional phase space tomography from one-dimensional measurements of a hadron beam", published in Physical Review Accelerators and Beams.

 

Up-to-date implementation of MENT: https://github.com/austin-hoover/ment
DOI: 10.15468/dl.7v2d8p
title: Occurrence Download

description: A dataset containing 1209 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-1060.0",
 "Geometry POLYGON((-128.86347 10.83607,-55.89145 10.83607,-55.89145 57.97457,-128.86347 57.97457,-128.86347 10.83607))",
 "TaxonKey is Ligustrum vulgare"
 ]
}

 The dataset includes 1209 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045417-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tr5jdh
title: Occurrence Download

description: A dataset containing 2145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.76277908302768",
 "DecimalLongitude is less than 6.76583863621207",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 2145 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045420-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.crwppz
title: Occurrence Download

description: A dataset containing 320 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ateles hybridus"
 ]
}

 The dataset includes 320 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045418-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ert9cs
title: Occurrence Download

description: A dataset containing 969 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhinella spinulosa"
 ]
}

 The dataset includes 969 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045421-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17649056
title: Implementation of a Server Monitoring System using the Prototyping Method at WIKA BETON
DOI: 10.5281/zenodo.17649057
title: Implementation of a Server Monitoring System using the Prototyping Method at WIKA BETON
DOI: 10.5281/zenodo.17650457
title: data_comparing_semantic

description: To examine how the phonetic and semantic features of onomatopoeic words influence material perception, we conducted a semantic differentiation task with Turkish-speaking participants (N = 28) unfamiliar with Japanese. Stimuli consisted of three-word sets: 14 Turkish words, 14 semantically similar Japanese words, and 14 phonetically similar Japanese words. Participants rated each word on seven adjective pairs: (1) flat-bumpy, (2) warm-cold, (3) wet-dry, (4) light-heavy, (5) smooth-rough, (6) slippery-sticky, and (7) granular-whole. The data is winsorized to make it appropriate for our analyses. R codes for MDS analysis is also included.
DOI: 10.5281/zenodo.17650458
title: data_comparing_semantic

description: To examine how the phonetic and semantic features of onomatopoeic words influence material perception, we conducted a semantic differentiation task with Turkish-speaking participants (N = 28) unfamiliar with Japanese. Stimuli consisted of three-word sets: 14 Turkish words, 14 semantically similar Japanese words, and 14 phonetically similar Japanese words. Participants rated each word on seven adjective pairs: (1) flat-bumpy, (2) warm-cold, (3) wet-dry, (4) light-heavy, (5) smooth-rough, (6) slippery-sticky, and (7) granular-whole. The data is winsorized to make it appropriate for our analyses. R codes for MDS analysis is also included.
DOI: 10.5281/zenodo.17640241
title: Data from: Limited role of aquatic habitat complexity in mitigating the ecological impact of invasive bullfrogs on native amphibians

description: Spatial overlap in habitat use and structural habitat complexity can shape the ecological impact of biological invasions. Environmental conditions that mitigate these impacts can be exploited

in nature-based conservation strategies aimed at damage reduction when complete eradication

is no longer feasible. In this study, we investigated how site-level habitat characteristics shape

the ecological impact of non-native American bullfrogs (Lithobates catesbeianus) on native am-

phibian communities. We surveyed 134 standing water bodies in Belgium using environmental

DNA (eDNA) quantitative barcoding and metabarcoding to assess bullfrog density and native

amphibian community structure, respectively, and recorded 25 habitat characteristics. We in-

vestigated (i) environmental niche overlap between native amphibians and bullfrogs, (ii)

species-habitat associations, and (iii) the interactive effect of aquatic habitat complexity, based

on aquatic macrophyte coverage, and bullfrog density on native amphibians. Our findings show

that the environmental niche of native amphibians was substantially smaller than and nested

within that of bullfrogs, potentially limiting opportunities for impact mitigation through niche

differentiation. Native species with smaller niches and stronger habitat associations were gener-

ally more affected by bullfrogs than less habitat-specific species. Although structurally complex

aquatic habitats generally benefited most native amphibians, these positive effects were often

outweighed by the negative impacts of increasing bullfrog densities. The ability of aquatic habi-

tat complexity provided by aquatic macrophytes to reduce the impact of non-native bullfrogs de-

pended on the native amphibian species involved and the specific conservation objectives being

pursued—whether oriented toward maintaining amphibian species richness or ensuring the per-

sistence of focal species. Increasing aquatic habitat complexity alone is thus insufficient as a

stand-alone management strategy to protect native amphibians from non-native bullfrogs.
DOI: 10.5281/zenodo.16420105
title: Data from: Limited role of aquatic habitat complexity in mitigating the ecological impact of invasive bullfrogs on native amphibians

description: Spatial overlap in habitat use and structural habitat complexity can shape the ecological impact of biological invasions. Environmental conditions that mitigate these impacts can be exploited

in nature-based conservation strategies aimed at damage reduction when complete eradication

is no longer feasible. In this study, we investigated how site-level habitat characteristics shape

the ecological impact of non-native American bullfrogs (Lithobates catesbeianus) on native am-

phibian communities. We surveyed 134 standing water bodies in Belgium using environmental

DNA (eDNA) quantitative barcoding and metabarcoding to assess bullfrog density and native

amphibian community structure, respectively, and recorded 25 habitat characteristics. We in-

vestigated (i) environmental niche overlap between native amphibians and bullfrogs, (ii)

species-habitat associations, and (iii) the interactive effect of aquatic habitat complexity, based

on aquatic macrophyte coverage, and bullfrog density on native amphibians. Our findings show

that the environmental niche of native amphibians was substantially smaller than and nested

within that of bullfrogs, potentially limiting opportunities for impact mitigation through niche

differentiation. Native species with smaller niches and stronger habitat associations were gener-

ally more affected by bullfrogs than less habitat-specific species. Although structurally complex

aquatic habitats generally benefited most native amphibians, these positive effects were often

outweighed by the negative impacts of increasing bullfrog densities. The ability of aquatic habi-

tat complexity provided by aquatic macrophytes to reduce the impact of non-native bullfrogs de-

pended on the native amphibian species involved and the specific conservation objectives being

pursued—whether oriented toward maintaining amphibian species richness or ensuring the per-

sistence of focal species. Increasing aquatic habitat complexity alone is thus insufficient as a

stand-alone management strategy to protect native amphibians from non-native bullfrogs.
DOI: 10.5281/zenodo.17651140
title: De novo assembled transcripts for Zygnema and Mesotaenium for the study of systems acclimation to osmotic stress

description: Transcript were assembled de novo using the Trinity pipeline.
DOI: 10.5281/zenodo.17651141
title: De novo assembled transcripts for Zygnema and Mesotaenium for the study of systems acclimation to osmotic stress

description: Transcript were assembled de novo using the Trinity pipeline.
DOI: 10.5285/2b8cb09f-9348-4115-a90e-818eade599af
title: Transcripts on seasonal climate forecasts, indices and practices from farmers in Malawi, April-May 2019

description: The dataset provides transcripts from focus groups in Salima, Mangochi and Zomba (Malawi). The focus groups' discussions concern the monthly agricultural activities in association with the climate services and extreme weather events. 

The data were produced as part of NERC Program Science for Humanitarian Emergencies and Resilience (SHEAR). Grant reference - Improving Preparedness to Agro-Climatic Extremes in Malawi (IPACE-Malawi).
description: Between April and May 2019 15 focus group discussions (FGDs) were conducted across five Extension Planning Areas (EPAs); 10 FGDs with farmers and 5 FGDs with Agricultural Extension Development Officers (AEDOs). The farmers involved in the FGD were selected by the AEDOs and included both male and female farmers (and amongst which one or more than one was the lead farmer i.e., farmer representative). In total, 70 female farmers and 48 male farmers, and 21 AEDOs participated in the FGDs. The age of male farmer and female farmer participants ranged from 28–58 to 20–54, respectively. The FGDs were conducted in the local language Chichewa, facilitated by a local research assistant who audio recorded, translated and transcribed the discussions.
DOI: 10.5518/314
title: Data associated with ‘Confinement of picosecond timescale current pulses by tapered coplanar waveguides.'

description: This data relates to the study of picosecond timescale pulse transmission and confinement in tapered waveguides. It includes the HFSS data which shows average electric field strength and confinement area, and a sample of transmitted THz pulses. It also includes THz peak position with distance for a curved tapered waveguide, and the current response in tapered and untapered GMR waveguides as a function of external magnetic field.
DOI: 10.6084/m9.figshare.30530975
title: Differential gene expression analysis output from canine prefrontal cortex and plasma extracellular vesicle RNA-seq.

description: We generated total transcriptome (RNA-seq) data on prefrontal cortex tissue and plasma EVs from young, older, and older dogs with Canine Cognitive Dysfucntion (CCD). From that, we used DESeq to quantify changes in protein coding genes, transposable elements, and miRNAs.
DOI: 10.6084/m9.figshare.30530975.v1
title: Differential gene expression analysis output from canine prefrontal cortex and plasma extracellular vesicle RNA-seq.

description: We generated total transcriptome (RNA-seq) data on prefrontal cortex tissue and plasma EVs from young, older, and older dogs with Canine Cognitive Dysfucntion (CCD). From that, we used DESeq to quantify changes in protein coding genes, transposable elements, and miRNAs.
DOI: 10.5285/199b0046-79a3-4e74-8152-17f10c376671
title: Seasonal agricultural calendars presenting activities per month for farmers in Malawi, April-May 2019

description: The dataset provides transcripts from focus groups in Salima, Mangochi and Zomba (Malawi). The focus groups' discussions focused on important monthly agricultural activities in association with the climate services and extreme weather events. This outlined how climatic factors affected agricultural decision-making. 

The data were produced as part of NERC Program Science for Humanitarian Emergencies and Resilience (SHEAR). Grant reference - Improving Preparedness to Agro-Climatic Extremes in Malawi (IPACE-Malawi).
description: Between April and May 2019 15 focus group discussions (FGDs) were conducted across five Extension Planning Areas (EPAs); 10 FGDs with farmers and 5 FGDs with Agricultural Extension Development Officers (AEDOs). The farmers involved in the FGD were selected by the AEDOs and included both male and female farmers (and amongst which one or more than one was the lead farmer i.e., farmer representative). In total, 70 female farmers and 48 male farmers, and 21 AEDOs participated in the FGDs. The age of male farmer and female farmer participants ranged from 28–58 to 20–54, respectively. As part of the FGDs these seasonal calendars were used to guide the discussion. 

The FGDs were conducted in the local language Chichewa, facilitated by a local research assistant who audio recorded, translated and transcribed the discussions.