cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/d8l-a70-rh3
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t1j-ga7-akx
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24798462.v2
title: Genetic data for Q. glauca populations and R code of SDM analysis

description: Genetic data for Q. glauca populations and R code of SDM analysis
DOI: 10.3535/0ds-2e1-z9j
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qa8-f4k-x0k
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/297cn3sr35
title: Data for: Land and water footprints associated with rice and maize losses in Brazil

description: Food loss and waste (FLW) implies loss of valuable natural resources and, consequently, has a negative impact on economic, environmental and social issues globally. Brazil, as a prominent world food producer, presents high levels of food losses and, hence, loss/waste of natural resources. This study aims to estimate the amount of land and water footprints associated with rice and maize losses in Brazil. The investigation involved the analysis of annual data obtained from the Food and Agriculture Organization of the United Nations (FAO) and the Brazilian Institute for Geography and Statistics (IBGE) regarding planted area, harvest area, production and loss of rice and maize in Brazil from 1988 to 2017, in order to estimate the amount of land and water footprints of rice and maize losses. Rice loss in Brazil is responsible for an average annual land footprint (LF) of 400 thousand hectares with a negative trend (slope) of 13.8 thousand hectares per year, while maize loss in Brazil is responsible for an average annual LF of 1.26 million hectares with a negative trend (slope) of 7.9 thousand hectares per year. The average annual LF of rice loss is about 11.46% of rice planted area, and the average annual LF of maize loss is about 9.34% of maize planted area in Brazil. Rice loss is associated with an average annual water footprint (WF) of 3.06 billion m3, while maize loss is associated with an average annual WF of 7.37 billion m3. The average annual WF per hectare of planted area for maize and rice losses is 533 m3/ha and 949 m3/ha, respectively. The results reinforce the need for promoting actions to drastically reduce FLW worldwide. This study encourages more drastic public policies to be adopted in order to reduce FLW and, consequently, the waste of natural resources and environmental impacts.
DOI: 10.3535/vbp-6rc-kmq
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24215967.v2
title: <b>Chlorophyll-a, nutrients, sea surface temperature and salinity, off Campeche, Mexico.</b>

description: Data from four oceanographic surveys were carried out from October 2017 to June 2018, to analyze the Sea Surface Temperature (SST), Sea Surface Salinity (SSS), Chlorophyll-a (Chla), and nutrients, such as Dissolved Inorganic Nutrients (DIN [NO<sub>3</sub><sup>-</sup>+ NO<sub>2</sub><sup>-</sup>+NH<sub>4</sub><sup>+</sup>]), Total Nitrogen (TN), Total Phosphorous (TP) and SiO<sub>2</sub>, off Campeche, Mexico.
DOI: 10.3535/6d6-bmr-z5g
title: Pseudoasaphus globifrons Eichwald

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hvv-dcq-z3t
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22506250.v2
title: 2021 IRCSP Flight Data

description: Raw data captured from the IRCSP detectors from the Summer 2021 balloon flight
DOI: 10.3535/gk4-njg-6y8
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yrf-exw-f4l
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/79g-hj8-bta
title: igneous rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zj6-l9a-5fe
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/501-el6-esq
title: †Archinacella rostrata Perner, 1903

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lm2-fnk-rpl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gnr-y7p-x0t
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26124469.v3
title: Heat and Helping

description: <b>Update Note (16 Dec 2024):</b>During the peer review of a paper reporting these results, data files "data_alt.csv" and "data_alt_r1.csv" were hosted in this domain for reviewers to evaluate the work. Since the data contain copyrighted information, they cannot be shared publicly. Therefore, upon acceptance of publication of the work (15 Dec 2024), the two datasets were removed from this domain. Colleagues who are interested in the data can contact the corresponding author (Henry Ng: nghks@hku.hk) for more information. For security reasons, ipynb files containing the author's directory paths have been removed as well.<b>Data Files (removed):</b>data_alt.csv is the data reported in the first submission of this project. data_alt_r1.csv is an expanded data file in response to comments after the first review.data_overview summarizes the variable columns of data files data_alt.csv and data_alt_r1.csv.<b>Results Files:</b>ms_results.ipynb hosts summary statistics and visuals reported in the results section of the published article.donate_m1_m6.ipynb, help_strngr_m1_m6.ipynb, and volunteer_m1_m6.ipynb host the PyStan codes that generate the MCMC chains for Bayesian inferences of Models 1 to 6 for each of the three outcome variables.<b>Supplementary Files:</b>supplementary_r1_1 corresponds to additional analyses required by R1C3, R2C5 and R2C4, regarding the use of the metric form of GNIPC instead of the dummy coded version. It also explores three covariates, namely GINI index, ghg emission, and % of population attaining tertiary education.supplementary_r1_2 corresponds to additional analyses required by R3C3, regarding the adoption of different priors. Four additional priors have been tested to show the minimal impact of the choice of priors on the analysis.supplementary_ar1_(hlp/don/vol) corresponds to analyses of Model 3, 5, and 6, with the addition of an autoregressive process (AR1) in the time series. The analyses report findings consistent with the original analyses without the AR1 process.
DOI: 10.3535/8pt-77a-bzd
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/smm-7w7-21z
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25283650.v1
title: Updated transcriptome annotation of common carp

description: The updated annotation file encompasses not only more comprehensive gene structure details, but also includes information related to circRNA, lncRNA, and RNA editing events. The transcriptome annotation assembly is based on the NCBI reference genome of common carp (accession: GCF_018340385.1).<br>
DOI: 10.3535/bez-m4k-lka
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ljm-hz2-x6e
title: Graptolithina Bronn, 1849

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13643462.v4
title: Data for “Anomalous Postrift Subsidence in the Bohai Bay Basin, Eastern China: Contributions from Mantle Process and Fault Activity”

description: The anomalous postrift subsidence and cumulative stretching factor data in txt format for the manuscript "Anomalous Postrift Subsidence in the Bohai Bay Basin, Eastern China: Contributions from Mantle Process and Fault Activity".
DOI: 10.3535/82b-vdp-4jc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z0w-xms-715
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13092788.v1
title: Model and data for "Exploring the global and local patterns of income segregation in Toronto, Canada: A multilevel multi-group modeling approach"

description: This repository contains the data and model code for the local segregation model (Model 3) described in: Exploring the global and local patterns of income segregation in Toronto, Canada: A multilevel multi-group modeling approach.
DOI: 10.3535/an3-yzp-5ry
title: Pyrolusite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zvx-82x-80g
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1449256.v1
title: Corneal confocal microscopy detects small fibre neuropathy in patients with upper gastrointestinal cancer and nerve regeneration in chemotherapy induced peripheral neuropathy.

description: This dataset is provided at request of the scientific journal PLOS One. These data were used for analysis in our study entitled "Corneal confocal microscopy detects small fibre neuropathy in patients with upper gastrointestinal cancer and nerve regeneration in chemotherapy induced peripheral neuropathy". We hereby make our dataset available.
DOI: 10.3535/1d9-2bp-c65
title: Hematite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8mx-ws6-dq3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.hv5c77
title: Occurrence Download

description: A dataset containing 93905 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Ambystoma macrodactylum Baird, 1850, Lithobates sylvaticus (LeConte, 1825), Rana luteiventris Thompson, 1913, Anaxyrus hemiophrys (Cope, 1886), Anaxyrus boreas (Baird & Girard, 1852), Pseudacris maculata (Agassiz, 1850))"
 ]
}

 The dataset includes 93905 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278575-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/6fh-sxf-zh9
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v15-dmr-bcy
title: Augite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14260679.v4
title: Norfish 20 English North East Atlantic Cod Fishery 1520–1790

description: The limited sources available for the English North East Atlantic fishery have largely been collected by Jones (2000) based on various sources including Foreign and Domestic letters and papers, Statutes of the Realm, State Papers, and ship logbooks and other archival materials. Active fishing efforts are recorded from various English ports along the east coast of England. The primary fishing grounds were around Iceland, but some fishing took place in the North Sea as well. It is likely that incidental fishing took place in the North Sea in transit from or to the Icelandic waters. The available data includes, where available, numbers of vessels deployed, numbers of fishers who were active, and tonnage of vessels.
DOI: 10.3535/jaj-4bv-9w3
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xdm-dqy-jck
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28646084.v1
title: Supporting Dataset S2

description: Supporting Dataset S2. Files used to infer the 16S rDNA phylogeny aimed at inferring the phylogenetic position of Clade X (shown in Supporting Figure S1). Contains alignment before and after masking, and IQTree input and output files.
DOI: 10.3535/46p-00v-08k
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8fk-z9b-4z5
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cft-alq-bay
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21737972.v1
title: 2020 DSTB treatment outcomes V1(TCMando).xlsx

description: dataset for TB treatment outcomes in Zimbabwe for the 2020 cohorts
DOI: 10.3535/vg8-s9j-01l
title: †Holopea J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.bykc4e
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Quercus rubra L."
 ]
}

 The dataset includes 104 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009765-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/1rq-wes-s1j
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e84-hqh-k6c
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/h6vw2d27fr
title: The effects of foreign banks presence on financial development in Africa; the role of institutional quality.

description: The aim of the paper is to examine the moderation role of institutional quality on foreign bank presence and financial development nexus in 28 African countries for the period of 19 years spanning from 2000 to 2018. However, data on foreign bank presence span from 2000 to 2015. Data showed that while foreign bank presence induces financial development,  the quality of institutions is also able to magnify the positive effect further.
Data used for the study was sourced from World Bank (World Development Indicators (WDI), World Governance Indicators (WGI), Global Financial Database (GFD)), Human Development Report Office (HDRO), Bank Scope (BS), and International Monetary Fund (IMF). For instance, financial development is sourced from IMF whereas foreign bank presence measured with a share of foreign bank assets as a percentage of total universal banks' assets is sourced from BS.  Inflaton, the consumer price index was used as a proxy for inflation and was used to capture the macroeconomic (in) stability of a country and was collected from WDI. Net trade which is the vector of export and import as a ratio of GDP and was obtained from WDI. Boone Indicator is a measure of the level of competition sourced from GFD. The study used the six available measures of institutional quality to create a composite index for institutional quality to capture the various dimensions of the institutions. These six variables include the estimate of; control of corruption, voice and accountability, rule of law, political stability and absence of violence, government effectiveness, and regulatory quality. The data on these variables were collected from the WGI of the World Bank. The study used Gross Domestic Product per Capita (GDPC)  and sourced from WDI. The study used real exchange rate as a proxy for exchange rate and data was collected from WDI. The financial development Index, which is a measure has a mean of 0.1434. The minimum value for financial development is 0.0505 whereas the maximum value is 0.5028. This means that on average the financial system of the African sample for the study period is less developed. Also, the data shows that the African sample has more domestic banks than foreign banks on average. This is because foreign bank presence has a mean of 0.4468, implying that foreign banks hold 45% of the total asset of the sample. The competition among banks which is measured with the Bonne indicator has a mean of -0.0375. On average trade openness which is measured as net trade (%GDP) has a mean of 65.37 with a maximum value of 152.5471 and a minimum value of 1.295. The real GDP per capita that measures the income level of the citizens has a mean of 2.423 with the least value of -62.39 and the highest value of 121.78.  By implication, there is the existence of inequality among the African sample size. 

The study conducted a sensitivity analysis, using both private credit and stock market capitalization both sourced from WDI.
DOI: 10.3535/55g-9qw-vx6
title: Rhodonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vba-l7h-1ja
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ga1-j48-v44
title: †Asaphus (Asaphus) raniceps Dalman, 1827

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qcp-j11-ttg
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14217242.v2
title: Additional file 21: Table S7

description: List of territory-specific genes in the silk gland.
DOI: 10.6084/m9.figshare.22317658.v1
title: Dataset : A systematic investigation of detectors for low signal-to-noise ratio EMG signals

description: The simulated surface EMG data using the three models(Gaussian, Laplacian and Biophysical model) that was used for evaluating the performance of different EMG detecion algorithm is provided here. Both the validation dataset and Training dataset is provided here.
DOI: 10.3535/7xj-01z-cnq
title: †Bucania J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/glp-16c-mcm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7560488.v1
title: Scottish Salmon Farm Management Areas (Shapefile)

description: Shapefile (.shp format) consisting of polygons showing approximate perimeters of "Farm Management Areas". Outlines are based on pictorial maps given by the Scottish Salmon industry in "A code of good practice for Scottish finfish aquaculture" (2011) (http://thecodeofgoodpractice.co.uk/).<br>The files use the projected coordinate system EPSG:27700: OSGB 1936 / British National Grid (United Kingdom Ordnance Survey).
DOI: 10.21954/ou.rd.24573205.v3
title: OpenMARS continuous MY28-35 standard database

description: The Open access to Mars Assimilated Remote Soundings (OpenMARS) database is a reanalysis product combining past spacecraft observations with a state-of-the-art Mars Global Circulation Model (GCM). The OpenMARS product is a global surface/atmosphere reference database of key variables for multiple Mars years.Spacecraft observations of column dust optical depth and temperature profiles from the Mars Climate Sounder (MCS) instrument on the Mars Reconnaissance Orbiter spacecraft are combined with a Mars GCM used at the Open University. The standard database includes 2-hourly output of key dynamic and surface variables such as zonal/meridional wind, temperature as a function of altitude and column dust optical depth.Extended details on this dataset can be found in the OpenMARS-MY28-35-reference-manual.pdf document included in this repository.
DOI: 10.3535/b5g-f60-vl0
title: †Orthoceras Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fzv-dj2-wjm
title: Mollusca

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16895062.v1
title: January 2021 Covid-19 Twitter Streaming Dataset

description: The file contains Tweet IDs* for COVID-19 related tweets collected in January, 2021 from Twitter's COVID-19 Streaming Endpoint via a custom script developed by the Social Media Lab (https://socialmedialab.ca/). Visit our interactive dashboard at https://stream.covid19misinfo.org/ for a preview and some general stats about this COVID-19 Twitter streaming dataset. For more info about Twitter's COVID-19 Streaming Endpoint, visit https://developer.twitter.com/en/docs/labs/covid19-stream/overview * Note: In accordance with Twitter API Terms, the dataset only includes Tweet IDs (as opposed to the actual tweets and associated metadata). To recollect tweets contained in this dataset, you can use programs such as Hydrator (https://github.com/DocNow/hydrator/) or the Python library Twarc (https://github.com/DocNow/twarc/).
DOI: 10.6084/m9.figshare.26067244.v1
title: Taxonomic and functional characterisation of viruses from a “lost world” in the Cuatro Ciénegas Basin, Mexico

description: Several lines of evidence suggest that the Cuatro Ciénegas Basin (CCB) is a “lost world” that has preserved at least some characteristics of ancient oceans. The microbial diversity of Archaean Domes (AD), a hypersaline and alkaline pond, includes various novel lineages of archaea and bacteria, as well as a highly diverse viral community. Nevertheless, the viruses from AD have not yet been subjected to a comprehensive taxonomic and functional characterisation. Given the pivotal role of viruses in microbial communities, we sought to determine which viruses are found at AD and the functions they encode, with the aim of identifying signatures of this so called “lost world”, and gaining deeper insights into how these viruses impact the structure of such unique microbial communities. The taxonomic classification of 87 metagenomic viral contigs (mVCs) from AD yielded taxonomic affiliations consistent with the environment, and with the diversity described in AD. We were able to identify signatures of the “lost world”, including associations with marine viruses, the formation of clusters of endemic viruses, and the detection of long branches between mVCs and their closest relatives. Furthermore, the high proportion of unannotated proteins and the low percentage of core genes indicate the distinctiveness of the viral lineages in AD. Finally, our functional characterisation indicated the presence of genes involved in diverse virus-host interactions, including metabolic reprogramming, evasion of anti-phage systems and superinfection exclusion. Intriguingly, we identified a mVC-encoded UDP-sulfoquinovose synthase (SQD1), an enzyme involved in sulfolipid biosynthesis, that has been described as an adaptation to low phosphorus concentrations in an endemic bacterium from the CCB. It is postulated that this enzyme, which was acquired by horizontal gene transfer from their hosts, may contribute to syntrophic interactions in this phosphorus-poor environment, where highly interdependent microorganisms have evolved.