cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5519/qd.kx5gycqz
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (13973 records)
DOI: 10.6084/m9.figshare.21101806
title: A Systematic Implementation of Machine Learning Algorithms for Multifaceted Antimicrobial Screening of Lead Compounds

description: Compounds sourced from ChEMBL and Zinc15.
DOI: 10.15151/esrf-es-874785428
title: Macromolecular Crystallography in Bordeaux/Lyon/Toulouse IECB IBGC CBMN / IBCP-MMSB ICBMS / IPBS

description: The different research teams who are part of this BAG are located in Bordeaux, Lyon and Toulouse. They are mainly working on worldwide health concerns or biotechnological relevant projects. In more details, infectiology, molecular assemblies, biosynthetic pathways or glycobiology are their main research axises. Important results have been obtained so far regarding the development of new therapeutic strategies against several infectious diseases or regarding plastic bioremediation. In order to go further into details of all these studies, access to ESRF facilities is a requirement.
DOI: 10.15151/esrf-es-885249787
title: Structural Biology of Macromolecules and Macromolecular complexes from India

description: Structural biology research groups located in India constitute the INDIA-BAG and will utilize MX & SAXS to study different biological macromolecules. The non-proprietary agreement signed between ESRF and the Department of Biotechnology (DBT) enables studies that provide fundamental mechanistic insight regarding different biological processes. A brief description of over 50 research groups is provided in the global summary and a summary of their research contributions involving data collected at ESRF is provided in the 2 year BAG report. The ESRF-India partnership is supported by a single grant provided to the RCB by the DBT. Please note that a report listing no. of shifts utilized, details of users and the research output from these visits has to be sent to the DBT to obtain release of funds to pay ESRF membership dues. Consequently, all the structural biologists from India are grouped in a single BAG to enable monitoring of progress to collect the required statistics.
DOI: 10.15151/esrf-es-918057962
title: Structural Biology at EMBL Grenoble, IBS-CIBB and IAB

description: This proposal clusters crystallography projects at the EMBL Grenoble, IBS and IAB working on different topics with a focus on nucleic acid-protein complexes and host-pathogen interactions. The proposers have long-standing experience in the use, as well as the development of beam lines for macromolecular crystallography and have participated in successive BAG applications over the years, mostly at the ESRF but also at other synchrotrons (i.e. Soleil, Petra II, Diamond, SLS)
DOI: 10.15151/esrf-es-921447893
title: In situ study of recovery and recrystallization of Zr-2.5Nb alloy

description: Zirconium alloys are widely used in the nuclear industry due to their low neutron capture section and good resistance to corrosion, irradiation and creep. The microstructure of the Zr nuclear rector components evolves all along the manufacturing route and depending on process parameters it can impact the subsequent processes or the final component properties. It is therefore necessary to understand and master the structural evolution to increase the quality of the material. It is experimental evidence that recrystallization of the Zr-2.5Nb alloy containing metastable beta-Zr phase is very difficult if the material was not highly deformed. For finding the optimum processing route a comprehensive understanding of the phenomenon is necessary. The aim of the present proposal is performing an in situ analysis of the recovery and recrystallization for understanding the role of the stored energy and of the beta-Zr to beta-Nb transformation on the recrystallization process.
DOI: 10.15151/esrf-es-924803201
title: Gayluccite

description: Study the crystal structure of Gayluccite
DOI: 10.15151/esrf-es-928427106
title: CT of Papyrus reproduction

description: CT of Papyrus reproduction
DOI: 10.6084/m9.figshare.7533158.v3
title: 国际金融风险及持币成本的测度附表

description: 覆盖《<b>经济开放与货币需求：</b><b>国际金融风险及持币成本的测度</b>》正文中未报告的结果。
DOI: 10.6084/m9.figshare.20270664.v1
title: Supplemental data for the manuscript: Targeting tumor hypoxia inhibits aggressive phenotype of dedifferentiated thyroid cancer

description: Supplementary materials <br> Table S1. Hypoxia signatures, IFN-γ signature and expanded immune gene signature Table S2. Sequences for siRNA of HIF1A and the primers Table S3. Antibodies used in this study Table S4. Clinicopathological characteristics and genetic alterations of PTC patients in the TCGA cohort Table S5. Clinicopathological characteristics and genetic alterations of DDTC patients in the GSE76039 cohort Fig. S1 Forest plots showed hypoxia score’s correlations with overall survival in pan-cancer analyses. Fig. S2 Gene set enrichment analyses were performed to identify therapy-associated signaling pathways enriched in 74 DDTC patients from the combined GEO cohort. Fig. S3 The associations of hypoxia score with thyroid differentiation score (TDS), immune-checkpoint markers, tumor-associated macrophage markers and cancer-associated fibroblast markers in PTC patients from the TCGA cohort. Fig. S4 Analyses of HIF1α expression’s correlations with PDL1/CD274 and PDL2/PDCD1LG2 in the TCGA cohort (A and B) and the combined GEO cohort (C).
DOI: 10.6084/m9.figshare.20270664
title: Supplemental data for the manuscript: Targeting tumor hypoxia inhibits aggressive phenotype of dedifferentiated thyroid cancer

description: Supplementary materials <br> Table S1. Hypoxia signatures, IFN-γ signature and expanded immune gene signature Table S2. Sequences for siRNA of HIF1A and the primers Table S3. Antibodies used in this study Table S4. Clinicopathological characteristics and genetic alterations of PTC patients in the TCGA cohort Table S5. Clinicopathological characteristics and genetic alterations of DDTC patients in the GSE76039 cohort Fig. S1 Forest plots showed hypoxia score’s correlations with overall survival in pan-cancer analyses. Fig. S2 Gene set enrichment analyses were performed to identify therapy-associated signaling pathways enriched in 74 DDTC patients from the combined GEO cohort. Fig. S3 The associations of hypoxia score with thyroid differentiation score (TDS), immune-checkpoint markers, tumor-associated macrophage markers and cancer-associated fibroblast markers in PTC patients from the TCGA cohort. Fig. S4 Analyses of HIF1α expression’s correlations with PDL1/CD274 and PDL2/PDCD1LG2 in the TCGA cohort (A and B) and the combined GEO cohort (C).
DOI: 10.6084/m9.figshare.20270664.v3
title: Supplemental data for the manuscript: Targeting tumor hypoxia inhibits aggressive phenotype of dedifferentiated thyroid cancer

description: Supplementary materials <br> Table S1. Hypoxia signatures, IFN-γ signature and expanded immune gene signature Table S2. Sequences for siRNA of HIF1A and the primers Table S3. Antibodies used in this study Table S4. Clinicopathological characteristics and genetic alterations of PTC patients in the TCGA cohort Table S5. Clinicopathological characteristics and genetic alterations of DDTC patients in the GSE76039 cohort Fig. S1 Forest plots showed hypoxia score’s correlations with overall survival in pan-cancer analyses. Fig. S2 Gene set enrichment analyses were performed to identify therapy-associated signaling pathways enriched in 74 DDTC patients from the combined GEO cohort. Fig. S3 The associations of hypoxia score with thyroid differentiation score (TDS), immune-checkpoint markers, tumor-associated macrophage markers and cancer-associated fibroblast markers in PTC patients from the TCGA cohort. Fig. S4 Analyses of HIF1α expression’s correlations with PDL1/CD274 and PDL2/PDCD1LG2 in the TCGA cohort (A and B) and the combined GEO cohort (C).
DOI: 10.6084/m9.figshare.20270664.v2
title: Supplemental data for the manuscript: Targeting tumor hypoxia inhibits aggressive phenotype of dedifferentiated thyroid cancer

description: Supplementary materials <br> Table S1. Hypoxia signatures, IFN-γ signature and expanded immune gene signature Table S2. Sequences for siRNA of HIF1A and the primers Table S3. Antibodies used in this study Table S4. Clinicopathological characteristics and genetic alterations of PTC patients in the TCGA cohort Table S5. Clinicopathological characteristics and genetic alterations of DDTC patients in the GSE76039 cohort Fig. S1 Forest plots showed hypoxia score’s correlations with overall survival in pan-cancer analyses. Fig. S2 Gene set enrichment analyses were performed to identify therapy-associated signaling pathways enriched in 74 DDTC patients from the combined GEO cohort. Fig. S3 The associations of hypoxia score with thyroid differentiation score (TDS), immune-checkpoint markers, tumor-associated macrophage markers and cancer-associated fibroblast markers in PTC patients from the TCGA cohort. Fig. S4 Analyses of HIF1α expression’s correlations with PDL1/CD274 and PDL2/PDCD1LG2 in the TCGA cohort (A and B) and the combined GEO cohort (C).
DOI: 10.6084/m9.figshare.21101965
title: Das_GELS_Data

description: The data shows the sampled plot based spectral variables extracted from satellite image and their regression analysis with the plot based AGB of the study area.
DOI: 10.5517/ccdc.csd.cc2bg30y
title: CCDC 2158499: Experimental Crystal Structure Determination

description: Related Article: Colton R. Davis, Yue Fu, Peng Liu, Joseph M. Ready|2022|J.Am.Chem.Soc.|144|16118|doi:10.1021/jacs.2c06493
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bwk71
title: CCDC 2171433: Experimental Crystal Structure Determination

description: Related Article: Dong-Xue Feng, Zhen-Ni Gao, Jie Li, Yu-Han Wang, Ji-Xiang Hu, Zhen-Zhen Xue, Guo-Ming Wang|2022|Cryst.Growth Des.|22|5680|doi:10.1021/acs.cgd.2c00759
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c626w
title: CCDC 2180577: Experimental Crystal Structure Determination

description: Related Article: Yue Sun, Cheng Qian, Thomas J. Emge, Yanbang Li, William P. Kopcha, Lu Wang, Jianyuan Zhang|2022|Org.Lett.|24|6417|doi:10.1021/acs.orglett.2c02494
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.19623597
title: In situ electrochemical recomposition of decomposed redox-active species in aqueous organic flow batteries

description: We deposited our source data Fig. 2a, 2b, Fig.4 and Extended Data Fig. 2. We also have deposited the NCHEM-21122371-related raw data to Figshare with the link of https://doi.org/10.6084/m9.figshare.19612128. Readers will be able to access by 06/01/2022.
DOI: 10.6084/m9.figshare.19623597.v1
title: In situ electrochemical recomposition of decomposed redox-active species in aqueous organic flow batteries

description: We deposited our source data Fig. 2a, 2b, Fig.4 and Extended Data Fig. 2. We also have deposited the NCHEM-21122371-related raw data to Figshare with the link of https://doi.org/10.6084/m9.figshare.19612128. Readers will be able to access by 06/01/2022.
DOI: 10.6084/m9.figshare.19634736
title: Introducing High-Valence Elements into Cobalt-Free Layered Cathodes for Practical Lithium-Ion Batteries

description: Supplementary References 1-13 Supplementary Figures 1-30 Supplementary Tables 1-5
DOI: 10.6084/m9.figshare.19634736.v1
title: Introducing High-Valence Elements into Cobalt-Free Layered Cathodes for Practical Lithium-Ion Batteries

description: Supplementary References 1-13 Supplementary Figures 1-30 Supplementary Tables 1-5
DOI: 10.6084/m9.figshare.20285358.v1
title: Decitabine enhances targeting of AML cells by NY-ESO-1-specific TCR-T cells and promotes the maintenance of effector function and the memory-like phenotype

description: Combination of NY-ESO-1 specific TCR-T cells with Decitabine for treating AML.
DOI: 10.6084/m9.figshare.20285358
title: Decitabine enhances targeting of AML cells by NY-ESO-1-specific TCR-T cells and promotes the maintenance of effector function and the memory-like phenotype

description: Combination of NY-ESO-1 specific TCR-T cells with Decitabine for treating AML.
DOI: 10.48531/jbru.calmip/c2x5i2/qejnnu
title: G.GSA_results.xlsx

description: Calculation details of the global sensitivity analysis (GSA)
DOI: 10.48531/jbru.calmip/c2x5i2/qtijna
title: B.SSF_module.tab

description: Feedstock-dependent LCI calculation of solid substrate fermentation (SSF)
DOI: 10.48531/jbru.calmip/c2x5i2/shygiz
title: A.Agrifood_Baseline.tab

description: France agrifood co-products resource potential (quantity, composition before and after SSF)
DOI: 10.48531/jbru.calmip/c2x5i2/yv9utz
title: E.AD_module.tab

description: Feedstock-dependent LCI calculation of anaerobic digestion (AD)
DOI: 10.48531/jbru.calmip/c2x5i2/zbshw7
title: D.LUC_module.tab

description: LCI calculation of deterministic land use change (LUC)
DOI: 10.48531/jbru.calmip/c2x5i2/avhchw
title: C_CF_module.tab

description: Feedstock-dependent LCI calculation of compound feed (CF)
DOI: 10.48531/jbru.calmip/c2x5i2/gdmugp
title: D.LUC_module.tab

description: LCI calculation of deterministic land use change (LUC)
DOI: 10.48531/jbru.calmip/c2x5i2/hgub9j
title: F.LCA_results.tab

description: Raw life cycle assessment results for the six case studies
DOI: 10.48531/jbru.calmip/c2x5i2/nh0eum
title: F.LCA_results.tab

description: Life cycle assessments results for the sixteen ILCD 2018 impact categories and the six case studies
DOI: 10.48531/jbru.calmip/c2x5i2/v6ml51
title: E.AD_module.tab

description: Feedstock-dependent LCI calculation of anaerobic digestion (AD)
DOI: 10.48531/jbru.calmip/c2x5i2/4qg1fm
title: A.Agrifood_Baseline.tab

description: France agrifood co-products resource potential (quantity, composition before and after SSF)
DOI: 10.48531/jbru.calmip/c2x5i2/ajjgwz
title: F.LCA_results.tab

description: Life cycle assessments results for the sixteen ILCD 2018 impact categories and the six case studies
DOI: 10.48531/jbru.calmip/c2x5i2/ctd4dj
title: B.SSF_module.tab

description: Feedstock-dependent LCI calculation of solid substrate fermentation (SSF)
DOI: 10.48531/jbru.calmip/c2x5i2/fn7bmy
title: G.GSA_results.xlsx

description: Calculation details of the global sensitivity analysis (GSA)
DOI: 10.48531/jbru.calmip/c2x5i2/g3aoqm
title: G.GSA_results.xlsx

description: Calculation details of the global sensitivity analysis (GSA)
DOI: 10.48531/jbru.calmip/c2x5i2/skeief
title: D.LUC_module.tab

description: LCI calculation of deterministic land use change (LUC)
DOI: 10.6084/m9.figshare.7533158
title: 国际金融风险及持币成本的测度附表

description: 附录和附表。
DOI: 10.6084/m9.figshare.7533158.v5
title: 国际金融风险及持币成本的测度附表

description: 附录和附表。
DOI: 10.6084/m9.figshare.7533158.v4
title: 国际金融风险及持币成本的测度附表

description: 附录和附表。
DOI: 10.5281/zenodo.7077624
title: Shared biophysical mechanisms determine early biofilm architecture development across different bacterial species

description: These data are the numerical values that underlie the Figures 1 - 4, and the Supplementary Figures 1 - 10 for the article "Shared biophysical mechanisms determine early biofilm architecture development across different bacterial species" by the same authors. The content of the data files is organized according to the figures and figure panels of this article.
DOI: 10.5281/zenodo.7077623
title: Shared biophysical mechanisms determine early biofilm architecture development across different bacterial species

description: These data are the numerical values that underlie the Figures 1 - 4, and the Supplementary Figures 1 - 10 for the article "Shared biophysical mechanisms determine early biofilm architecture development across different bacterial species" by the same authors. The content of the data files is organized according to the figures and figure panels of this article.
DOI: 10.6084/m9.figshare.21102154.v1
title: Additional file 1 of Testing the generalizability of ancestry-specific polygenic risk scores to predict prostate cancer in sub-Saharan Africa

description: Additional file 1: Table S1. Details about PRS variants and proxies used in this paper.
DOI: 10.6084/m9.figshare.21102154
title: Additional file 1 of Testing the generalizability of ancestry-specific polygenic risk scores to predict prostate cancer in sub-Saharan Africa

description: Additional file 1: Table S1. Details about PRS variants and proxies used in this paper.
DOI: 10.6084/m9.figshare.21102242
title: Additional file 4 of Glucose consumption rate-dependent transcriptome profiling of Escherichia coli provides insight on performance as microbial factories

description: Additional file 4: Supplementary table 2 List of differentially expressed genes when comparing the transcriptome of W3110 with those of the mutant strains.
DOI: 10.6084/m9.figshare.21102242.v1
title: Additional file 4 of Glucose consumption rate-dependent transcriptome profiling of Escherichia coli provides insight on performance as microbial factories

description: Additional file 4: Supplementary table 2 List of differentially expressed genes when comparing the transcriptome of W3110 with those of the mutant strains.
DOI: 10.6084/m9.figshare.21102245
title: Additional file 5 of Glucose consumption rate-dependent transcriptome profiling of Escherichia coli provides insight on performance as microbial factories

description: Additional file 5: Supplementary table 3 List of differentially expressed genes when performing pair-wise comparison of transcriptomes from strain in this study.
DOI: 10.6084/m9.figshare.21102245.v1
title: Additional file 5 of Glucose consumption rate-dependent transcriptome profiling of Escherichia coli provides insight on performance as microbial factories

description: Additional file 5: Supplementary table 3 List of differentially expressed genes when performing pair-wise comparison of transcriptomes from strain in this study.
DOI: 10.6084/m9.figshare.21102248
title: Additional file 6 of Glucose consumption rate-dependent transcriptome profiling of Escherichia coli provides insight on performance as microbial factories

description: Additional file 6: Supplementary table 5 List of genes displaying a positive correlation of expression with the specific rate of glucose consumption.
DOI: 10.6084/m9.figshare.21102248.v1
title: Additional file 6 of Glucose consumption rate-dependent transcriptome profiling of Escherichia coli provides insight on performance as microbial factories

description: Additional file 6: Supplementary table 5 List of genes displaying a positive correlation of expression with the specific rate of glucose consumption.
DOI: 10.6084/m9.figshare.21102251
title: Additional file 7 of Glucose consumption rate-dependent transcriptome profiling of Escherichia coli provides insight on performance as microbial factories

description: Additional file 7: Supplementary table 5 List of genes displaying a negative correlation of expression with the specific rate of glucose consumption.
DOI: 10.6084/m9.figshare.21102251.v1
title: Additional file 7 of Glucose consumption rate-dependent transcriptome profiling of Escherichia coli provides insight on performance as microbial factories

description: Additional file 7: Supplementary table 5 List of genes displaying a negative correlation of expression with the specific rate of glucose consumption.
DOI: 10.6084/m9.figshare.21102347.v1
title: Additional file 1 of Geomagnetic data from the GOCE satellite mission

description: Additional file 1.Pre-processed block correction of magnetometers.
DOI: 10.6084/m9.figshare.21102347
title: Additional file 1 of Geomagnetic data from the GOCE satellite mission

description: Additional file 1.Pre-processed block correction of magnetometers.
DOI: 10.6084/m9.figshare.21102352
title: Additional file 2 of Delineating transcriptional crosstalk between Mycobacterium avium subsp. paratuberculosis and human THP-1 cells at the early stage of infection via dual RNA-seq analysis

description: Additional file 2. Overall information about gene expression and VFDB annotation for each locus tag.
DOI: 10.6084/m9.figshare.21102352.v1
title: Additional file 2 of Delineating transcriptional crosstalk between Mycobacterium avium subsp. paratuberculosis and human THP-1 cells at the early stage of infection via dual RNA-seq analysis

description: Additional file 2. Overall information about gene expression and VFDB annotation for each locus tag.
DOI: 10.6084/m9.figshare.21102355
title: Additional file 3 of Delineating transcriptional crosstalk between Mycobacterium avium subsp. paratuberculosis and human THP-1 cells at the early stage of infection via dual RNA-seq analysis

description: Additional file 3. Overall information about differentially expressed genes in THP-1 cells.
DOI: 10.6084/m9.figshare.21102355.v1
title: Additional file 3 of Delineating transcriptional crosstalk between Mycobacterium avium subsp. paratuberculosis and human THP-1 cells at the early stage of infection via dual RNA-seq analysis

description: Additional file 3. Overall information about differentially expressed genes in THP-1 cells.
DOI: 10.6084/m9.figshare.21102365
title: Additional file 2 of Sarcoptic mange changes bacterial and fungal microbiota of bare-nosed wombats (Vombatus ursinus)

description: Additional file2: Dataset S1 Removed ASVs and their taxonomy.
DOI: 10.6084/m9.figshare.21102365.v1
title: Additional file 2 of Sarcoptic mange changes bacterial and fungal microbiota of bare-nosed wombats (Vombatus ursinus)

description: Additional file2: Dataset S1 Removed ASVs and their taxonomy.
DOI: 10.6084/m9.figshare.21102368
title: Additional file 3 of Sarcoptic mange changes bacterial and fungal microbiota of bare-nosed wombats (Vombatus ursinus)

description: Additional file3: Dataset S2 Full bacterial taxa association.
DOI: 10.6084/m9.figshare.21102368.v1
title: Additional file 3 of Sarcoptic mange changes bacterial and fungal microbiota of bare-nosed wombats (Vombatus ursinus)

description: Additional file3: Dataset S2 Full bacterial taxa association.
DOI: 10.6084/m9.figshare.21102371
title: Additional file 4 of Sarcoptic mange changes bacterial and fungal microbiota of bare-nosed wombats (Vombatus ursinus)

description: Additional file4: Dataset S3 Full fungal taxa association.
DOI: 10.6084/m9.figshare.21102371.v1
title: Additional file 4 of Sarcoptic mange changes bacterial and fungal microbiota of bare-nosed wombats (Vombatus ursinus)

description: Additional file4: Dataset S3 Full fungal taxa association.
DOI: 10.6084/m9.figshare.21102382
title: Additional file 13 of Pulmonary dust foci as rat pneumoconiosis lesion induced by titanium dioxide nanoparticles in 13-week inhalation study

description: Additional file 13: Table S1. Numerical values of the Means and SD data in Figures 1, 3, 4, 5, 6, and S2.
DOI: 10.6084/m9.figshare.21102382.v1
title: Additional file 13 of Pulmonary dust foci as rat pneumoconiosis lesion induced by titanium dioxide nanoparticles in 13-week inhalation study

description: Additional file 13: Table S1. Numerical values of the Means and SD data in Figures 1, 3, 4, 5, 6, and S2.