cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5288230
title: Photonic Integrated Chip Laser

description: Data Set Information:<br>This data was recorded from an integrated 4-section semiconductor laser. <br>The device is made up of 3 active sections and 1 passive section. <br>- a DFB laser section (300um), <br>- a semiconductor optical amplifier (SOA) section (200um), which can be operated forward biased for gain (amplified feedback) or reverse bias for absorption (feedback attenuation),<br>- a phase section (150um),<br>- a passive waveguide section (10,000um) with high reflectance coating to provide feedback.Output power time series were recorded as 3 system parameters were varied: the DFB laser current, the level of optical feedback and phase of the optical feedback.<br>- DFB laser current varied between 15mA and 50mA in steps of 0.1mA (351 values)<br>- Optical feedback level was increased by passing a forward current through the SOA section or attenuated by applying a reverse bias across the SOA section. The SOA section forward current is varied between 0mA and 10mA in 0.1mA steps (101 values) and reverse bias between 0V and 2V in 0.1V steps (21 values).<br>- Phase of the optical feedback was controlled by applying a current to the phase section. This was varied from 0mA to 7mA in steps of 1mA (8 values).The data is stored in HDF5 format. The filenames indicate the level of DFB current, phase section current (IPH) and SOA section forward current (GAS) or reverse voltage (VAS). <br>IPH$$.$$DFB##.##GAS@@.@@.h5 - where $$.$$ is the phase section current in mA, ##.## is the DFB laser section current in mA and @@.@@ is the SOA forward current in mA.<br>IPH$$.$$DFB##.##VAS@@.@@.h5 - where $$.$$ is the phase section current in mA, ##.## is the DFB laser section current in mA and @@.@@ is the SOA reverse bias in V.<br>Each file contains a single time series in the '/TimeSeries' dataset. Each of these has 3 attributes: 'DFB', 'GAS', IPH' which specify the values of the experimental parameters at which the data was captured.<br>Number of time series = 42,822 per phase section current (342,576 total)<br>Time series length = 80,000 points<br>Sampling rate = 40 GSa/s (25 ps per point)<br>Oscilloscope bandwidth = 12 GHz <br>ReferenceKane, D. M., McMahon, C., Argyris, A., & Syvridis, D. (2015). Integrated semiconductor laser with optical feedback: transition from short to long cavity regime. Optics Express, 23(14), 18754. doi:10.1364/OE.23.018754<br>
DOI: 10.6084/m9.figshare.5288224.v1
title: A Schiff-base cross-linked supramolecular polymer containing diiminophenol compartments and its interaction with copper(II) ions

description: We report here the preparation of a Schiff-base linked organic polymer <b>1</b> based on linkages containing the potent supramolecular aggregator benzene-1,3,5-tricarboxamide, connected through 2,6-diiminophenol metal binding pockets into a cross-linked polymer. The morphological and physical properties of this material are studied using electron microscopy techniques, thermal analysis, NMR, fluorescence spectroscopy and gas adsorption studies. The interaction of the polymer <b>1</b> with Cu<sup>II</sup> ions is then investigated by soaking the material with methanolic copper acetate solution, and studying the resulting aggregates using EDX microscopy and FTIR spectroscopy. A small-molecule model compound <b>2</b> is also prepared and crystallographically characterised to act as a spectroscopic comparison, providing strong evidence that <b>1</b> interacts with copper ions through a nucleation/seeding mechanism for the growth of microcrystalline copper acetate deposits, rather than via chemisorption of the copper ions within the diiminophenol binding pockets. Preliminary results suggest a similar mechanism for Co<sup>II</sup> adsorption, while Zn<sup>II</sup> ions exhibit a separate interaction mode.
DOI: 10.6084/m9.figshare.5288230.v1
title: Photonic Integrated Chip Laser

description: Data Set Information:<br>This data was recorded from an integrated 4-section semiconductor laser. <br>The device is made up of 3 active sections and 1 passive section. <br>- a DFB laser section (300um), <br>- a semiconductor optical amplifier (SOA) section (200um), which can be operated forward biased for gain (amplified feedback) or reverse bias for absorption (feedback attenuation),<br>- a phase section (150um),<br>- a passive waveguide section (10,000um) with high reflectance coating to provide feedback.Output power time series were recorded as 3 system parameters were varied: the DFB laser current, the level of optical feedback and phase of the optical feedback.<br>- DFB laser current varied between 15mA and 50mA in steps of 0.1mA (351 values)<br>- Optical feedback level was increased by passing a forward current through the SOA section or attenuated by applying a reverse bias across the SOA section. The SOA section forward current is varied between 0mA and 10mA in 0.1mA steps (101 values) and reverse bias between 0V and 2V in 0.1V steps (21 values).<br>- Phase of the optical feedback was controlled by applying a current to the phase section. This was varied from 0mA to 7mA in steps of 1mA (8 values).The data is stored in HDF5 format. The filenames indicate the level of DFB current, phase section current (IPH) and SOA section forward current (GAS) or reverse voltage (VAS). <br>IPH$$.$$DFB##.##GAS@@.@@.h5 - where $$.$$ is the phase section current in mA, ##.## is the DFB laser section current in mA and @@.@@ is the SOA forward current in mA.<br>IPH$$.$$DFB##.##VAS@@.@@.h5 - where $$.$$ is the phase section current in mA, ##.## is the DFB laser section current in mA and @@.@@ is the SOA reverse bias in V.<br>Each file contains a single time series in the '/TimeSeries' dataset. Each of these has 3 attributes: 'DFB', 'GAS', IPH' which specify the values of the experimental parameters at which the data was captured.<br>Number of time series = 42,822 per phase section current (342,576 total)<br>Time series length = 80,000 points<br>Sampling rate = 40 GSa/s (25 ps per point)<br>Oscilloscope bandwidth = 12 GHz <br>ReferenceKane, D. M., McMahon, C., Argyris, A., & Syvridis, D. (2015). Integrated semiconductor laser with optical feedback: transition from short to long cavity regime. Optics Express, 23(14), 18754. doi:10.1364/OE.23.018754<br>
DOI: 10.6084/m9.figshare.5288200
title: Tomography Scan Data Points

description: The comma separated vector files that contain the points from the generated surfaces from the scans of the three defective bearings and the stl files contain the complete 3D scans.
DOI: 10.6084/m9.figshare.5288227.v1
title: Optically Injected Solid State Laser Experiment Dataset

description: Output power time series from an optically injected 1064 nm solid-state Nd:YVO4 microchip laser. Time series recorded for different combinations of injection strength and optical frequency detuning.Full details here http://research.science.mq.edu.au/photonics-dynamical-systems/our-research/optically-injected-solid-state-lasers/Two 1064 nm solid state Nd:YVO4 lasers were operated in a master-slave configuration. The laser crystals were pumped with 150 mW diode lasers (SDL) operating at 809 nm. The pump power was low enough to ensure single mode operation. Light from the master laser was injected into the slave via an acousto-optic modulator (AOM) and the relative injection power measured on a detector. The temperature of the master laser was tuned with the Peltier element to control the frequency detuning between the lasers. The optical input of a Tektronix CSA 7404 oscilloscope was used to measure the intensity time-series of the slave laser under different combinations of injection strength and frequency detuning. This dataset consists of 55,440 files containing a single time series corresponding to a particular combination of injection strength and frequency detuning. The value of injection and detuning are specified in the file attributes 'var1' and 'var2'. The filename also contains the detuning value and injection index.J. P. Toomey, D. M. Kane, S. Valling and A. M. Lindberg 'Automated correlation dimension analysis of optically injected solid state lasers,' Optics Express 17 (9), 7592-7608 (2009).<br><br>
DOI: 10.6084/m9.figshare.5287732
title: ANI-1 data set: 20M DFT energies for non-equilibrium small molecules

description: Contains more than 20 million non-equilibrium conformations and density function theory (DFT) energies for small molecules. The molecules contain between 1 and 8 heavy atoms. The DFT calculations were carried out with the wb97x density functional with the 6-31g(d) basis set. Possible use cases include development of machine learned potentials.
DOI: 10.6084/m9.figshare.5287735
title: Motor deficit score (MDS) and post-MDS motor neuron cell numbers in rats with spinal cord ischemia-reperfusion (IR) injury, grouped according to Simvastatin treatment

description: This dataset consists of two Excel spreadsheets containing:<br>1. <b>MDS (raw).xlsx</b>: Motor deficit score (MDS) data per experiment group at various time points2. <b>number of normal motor neuron.xlsx: </b>counts of normal motor neurons within the anterior horns of the spinal cord following final MDS evaluation per experiment groupNeurological function was evaluated with hind limbs motor function after reperfusion for 7 days. The observer was blinded to the group assignments. Groups were assigned based on MDS at 8 hours, 1, 3, 5 and 7 days after reperfusion (see more detailed description below. Article abstract:Background: Spinal cord ischemic injury remains a serious complication of open surgical and endovascular aortic procedures. Simvastatin has been reported to be associated with neuroprotective effect after spinal cord ischemia-reperfusion (IR) injury.The aim of the study associated with this data was to determine the therapeutic efficacy of starting simvastatin after spinal cord IR injury in a rat model.Methods: In adult Sprague-Dawley rats, spinal cord ischemia was induced using a balloon-tipped catheter placed in the descending thoracic aorta. The animals were then randomly divided into 4 groups: group A (control); group B (0.5 mg/kg simvastatin); group C (1 mg/kg simvastatin); and group D (10 mg/kg simvastatin). Simvastatin was administered orally upon reperfusion for 5 days. Neurological function of the hind limbs was evaluated for 7 days after reperfusion and recorded using a motor deficit score (MDS) (0: normal, 5: complete paraplegia). The number of normal motor neurons within the anterior horns of the spinal cord was counted after final MDS evaluation. Then, the spinal cord was harvested for histopathological examination.
DOI: 10.6084/m9.figshare.5287735.v1
title: Motor deficit score (MDS) and post-MDS motor neuron cell numbers in rats with spinal cord ischemia-reperfusion (IR) injury, grouped according to Simvastatin treatment

description: This dataset consists of two Excel spreadsheets containing:<br>1. <b>MDS (raw).xlsx</b>: Motor deficit score (MDS) data per experiment group at various time points2. <b>number of normal motor neuron.xlsx: </b>counts of normal motor neurons within the anterior horns of the spinal cord following final MDS evaluation per experiment groupNeurological function was evaluated with hind limbs motor function after reperfusion for 7 days. The observer was blinded to the group assignments. Groups were assigned based on MDS at 8 hours, 1, 3, 5 and 7 days after reperfusion (see more detailed description below. Article abstract:Background: Spinal cord ischemic injury remains a serious complication of open surgical and endovascular aortic procedures. Simvastatin has been reported to be associated with neuroprotective effect after spinal cord ischemia-reperfusion (IR) injury.The aim of the study associated with this data was to determine the therapeutic efficacy of starting simvastatin after spinal cord IR injury in a rat model.Methods: In adult Sprague-Dawley rats, spinal cord ischemia was induced using a balloon-tipped catheter placed in the descending thoracic aorta. The animals were then randomly divided into 4 groups: group A (control); group B (0.5 mg/kg simvastatin); group C (1 mg/kg simvastatin); and group D (10 mg/kg simvastatin). Simvastatin was administered orally upon reperfusion for 5 days. Neurological function of the hind limbs was evaluated for 7 days after reperfusion and recorded using a motor deficit score (MDS) (0: normal, 5: complete paraplegia). The number of normal motor neurons within the anterior horns of the spinal cord was counted after final MDS evaluation. Then, the spinal cord was harvested for histopathological examination.
DOI: 10.6084/m9.figshare.5286298
title: Sherlock movie-recall angular gyrus data, single subject

description: Data from 1 subject watching the first episode of BBC's Sherlock and performing free recall - for more details, see:<br>J. Chen, Y.C. Leong, C.J. Honey, C.H. Yong, K.A. Norman, U. Hasson (2017). Shared memories reveal shared structure in neural activity across individuals. Nature Neuroscience.<br>C. Baldassano, J. Chen, A. Zadbood, J.W. Pillow, U. Hasson, K.A. Norman (2017). Discovering event structure in continuous narrative perception and memory. Neuron.
DOI: 10.6084/m9.figshare.5286310
title: MinimalDataSet_Seebacher_et_al.xlsx

description: An anonymized and reduced version of the dataset used for the study "<b>Development of a tool for prediction of ovarian cancer in patients with adnexal masses: value of plasma fibrinogen" </b>is presented here. Material, methods and statistical tests used are described in detail within the published manuscript.
DOI: 10.6084/m9.figshare.5286298.v1
title: Sherlock movie-recall angular gyrus data, single subject

description: Data from 1 subject watching the first episode of BBC's Sherlock and performing free recall - for more details, see:<br>J. Chen, Y.C. Leong, C.J. Honey, C.H. Yong, K.A. Norman, U. Hasson (2017). Shared memories reveal shared structure in neural activity across individuals. Nature Neuroscience.<br>C. Baldassano, J. Chen, A. Zadbood, J.W. Pillow, U. Hasson, K.A. Norman (2017). Discovering event structure in continuous narrative perception and memory. Neuron.
DOI: 10.6084/m9.figshare.5286310.v1
title: MinimalDataSet_Seebacher_et_al.xlsx

description: An anonymized and reduced version of the dataset used for the study "<b>Development of a tool for prediction of ovarian cancer in patients with adnexal masses: value of plasma fibrinogen" </b>is presented here. Material, methods and statistical tests used are described in detail within the published manuscript.
DOI: 10.4225/03/598a634fcfab8
title: Data from: Effects of the insect body size on the wing leading-edge vortex

description: Stable attachment of a leading-edge vortex (LEV) plays a key role in generating the high lift on insect wings. The insect's body-size can affect the LEV structure broadly in two ways. First, an overall change in the size changes the Reynolds number, which is known to have an influence on the LEV structure. Second, it may affect the Coriolis acceleration acting across the wing, depending on the wing-offset from the axis of rotation. To investigate this, the effects of Reynolds number and the wing-offset are independently studied for a rotating wing. The three-dimensional LEV structure is mapped using a scanning PIV technique. The rapid acquisition of images and their correlation are carefully validated. The results presented in this paper show that the LEV structure changes mainly with the Reynolds number. However, it is found to be only minimally affected by changing the central body radius over a wide range of body sizes.
DOI: 10.6084/m9.figshare.5286214
title: The Vanderbilt Chest Radiograph Test (VCRT)

description: Images used to test people on AMT - you can use these to reprogram the task using any software you would like.<br>
DOI: 10.6084/m9.figshare.5286166
title: Sherlock movie-recall angular gyrus data

description: Data from 17 subjects watching the first episode of BBC's Sherlock and performing free recall - for more details, see:<br>J. Chen, Y.C. Leong, C.J. Honey, C.H. Yong, K.A. Norman, U. Hasson (2017). Shared memories reveal shared structure in neural activity across individuals. Nature Neuroscience.<br>C. Baldassano, J. Chen, A. Zadbood, J.W. Pillow, U. Hasson, K.A. Norman (2017). Discovering event structure in continuous narrative perception and memory. Neuron.
DOI: 10.6084/m9.figshare.5286094
title: adolecents_prisoners_text_data_coded.csv

description: Dataset + R code.
DOI: 10.6084/m9.figshare.5286097
title: S-7-Swath1.wiff

description: Chlamydospore specific proteins of C. albicans.<br>
DOI: 10.6084/m9.figshare.5286091
title: Data from: Direct fitness benefits explain mate preference, but not choice, for similarity in heterozygosity levels, Ecology Letters

description: Data from: <b><i>Direct fitness benefits explain mate preference, but not choice, for similarity in heterozygosity levels - </i></b><i>Lies Zandberg, Gerrit Gort, Kees van Oers, Camilla A. Hinde</i><i></i><i>Ecology Letters</i>
DOI: 10.6084/m9.figshare.5286094.v1
title: adolecents_prisoners_text_data_coded.csv

description: Dataset + R code.
DOI: 10.6084/m9.figshare.5286097.v1
title: S-7-Swath1.wiff

description: Chlamydospore specific proteins of C. albicans.<br>
DOI: 10.6084/m9.figshare.5286091.v1
title: Data from: Direct fitness benefits explain mate preference, but not choice, for similarity in heterozygosity levels, Ecology Letters

description: Data from: <b><i>Direct fitness benefits explain mate preference, but not choice, for similarity in heterozygosity levels - </i></b><i>Lies Zandberg, Gerrit Gort, Kees van Oers, Camilla A. Hinde</i><i></i><i>Ecology Letters</i>
DOI: 10.6084/m9.figshare.5286025
title: SBSB 2015 adolescentes dataset

description: Stata 8.0 format SBSP -2015 survey database of a representative sample of the adolescent population living in the state of São Paulo, Brazil.
DOI: 10.6084/m9.figshare.5286091.v3
title: Data from: Direct fitness benefits explain mate preference, but not choice, for similarity in heterozygosity levels, Ecology Letters

description: Data from: <b><i>Direct fitness benefits explain mate preference, but not choice, for similarity in heterozygosity levels - </i></b><i>Lies Zandberg, Gerrit Gort, Kees van Oers, Camilla A. Hinde</i><i></i><i>Ecology Letters</i>
DOI: 10.6084/m9.figshare.5286091.v2
title: Data from: Direct fitness benefits explain mate preference, but not choice, for similarity in heterozygosity levels, Ecology Letters

description: Data from: <b><i>Direct fitness benefits explain mate preference, but not choice, for similarity in heterozygosity levels - </i></b><i>Lies Zandberg, Gerrit Gort, Kees van Oers, Camilla A. Hinde</i><i></i><i>Ecology Letters</i>
DOI: 10.6084/m9.figshare.5286016
title: 15-19wtfn.xls

description: SBSP -2015 survey database of a representative sample of the adolescent population living in the state of São Paulo, Brazil. <br>
DOI: 10.6084/m9.figshare.5286016.v1
title: 15-19wtfn.xls

description: SBSP -2015 survey database of a representative sample of the adolescent population living in the state of São Paulo, Brazil. <br>
DOI: 10.6084/m9.figshare.5286019.v1
title: SQLite database with MGI mouse gene annotations from Mouse Genome Informatics (MGI) at The Jackson Laboratory

description: A SQLite database with two tables: "description" and "genes". The description table includes the URL for the source file. The "genes" table contains the data, with 14 fields including chr (1-19, X, Y, MT), start and stop (in basepairs, GRCm38/mm10 build), source, strand, Name, and type.<br>This is like mouse_genes.sqlite, but just with the records with source=="MGI".
DOI: 10.6084/m9.figshare.5285950
title: flavohemoglobins

description: A folder containing flavohemoglobin nucleotide and protein sequences detected in over 700 fungal genomes.<br>
DOI: 10.6084/m9.figshare.5285950.v1
title: flavohemoglobins

description: A folder containing flavohemoglobin nucleotide and protein sequences detected in over 700 fungal genomes.<br>
DOI: 10.6084/m9.figshare.5285965.v1
title: Reseach data supporting "Microbial mineralization of cellulose in frozen soils"

description: Research data supporting "microbial mineralization of cellulose in frozen soils". The files uploaded contain solid state and liquid state NMR data in TOPSPIN,bruker format. A word document contains the NMR data key information.<br>An excel file contains all GC data for CO2 <br>An Excel file summarizes the data from NMR and GC experiment and is the base of the figures generated for the manuscript.
DOI: 10.6084/m9.figshare.5286019.v2
title: SQLite database with MGI mouse gene annotations from Mouse Genome Informatics (MGI) at The Jackson Laboratory

description: A SQLite database with two tables: "description" and "genes". The description table includes the URL for the source file. The "genes" table contains the data, with 14 fields including chr (1-19, X, Y, MT), start and stop (in basepairs, GRCm38/mm10 build), source, strand, Name, and type.<br>This is like mouse_genes.sqlite, but just with the records with source=="MGI" and taking just one of each of the duplicate records for a gene.
DOI: 10.6084/m9.figshare.5285872
title: Age-related differences in left ventricular structure and function between healthy men and women

description: <b>Objectives:</b> Cardiovascular function generally decreases with age, but whether this decrease differs between men and women is unclear. Our aims were twofold: (1) to investigate age-related sex differences in left ventricular (LV) structure, function and mechanics, and (2) to compare these measures between pre- and postmenopausal women in the middle-aged group. <b>Methods:</b> Resting echocardiography was performed in a cross-sectional sample of 82 healthy adults (14 young men, 19 middle-aged men, 15 young women, 34 middle-aged women: 15 premenopausal and 19 postmenopausal). Two-way ANOVAs were used to examine sex × age interactions, and <i>t</i>-tests to compare pre- and postmenopausal women (<i>α &lt;</i> 0.1). <b>Results:</b> Normalized LV mass, stroke volume and end-diastolic volume were significantly lower in middle-aged than young men, but this difference was smaller between middle-aged and young women. Peak systolic apical mechanics were significantly greater in middle-aged men than in middle-aged women, but not between young men and women. Postmenopausal women had significantly lower LV relaxation and mechanics (torsion, twisting velocity and apical circumferential strain rates) compared with middle-aged premenopausal women. <b>Conclusion:</b> Our cross-sectional findings suggest that the hearts of men and women may age differently, with men displaying greater differences in LV volumes accompanied by differences in apical mechanics.
DOI: 10.6084/m9.figshare.5285965.v2
title: Research data supporting "Microbial mineralization of cellulose in frozen soils"

description: Research data supporting "Microbial mineralization of cellulose in frozen soils". The files uploaded contain solid state and liquid state NMR data in TOPSPIN, Bruker format. A word document contains the NMR_data_key information.<br>An excel file contains all GC analysis <br>An Excel file summarizes the data from NMR and GC experiments and is the base of the figures generated for the manuscript.
DOI: 10.6084/m9.figshare.5286019.v3
title: SQLite database with MGI mouse gene annotations from Mouse Genome Informatics (MGI) at The Jackson Laboratory

description: A SQLite database with two tables: "description" and "genes". The description table includes the URL for the source file. The "genes" table contains the data, with 14 fields including chr (1-19, X, Y, MT), start and stop (in basepairs, GRCm38/mm10 build), source, strand, Name, and type.<br>This is like mouse_genes.sqlite, but just with the records with source=="MGI" and taking just one of each of the duplicate records for a gene.