cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2djrk8
title: CCDC 2220640: Experimental Crystal Structure Determination

description: Related Article: Emmanuel M. Gomes, Julia P. De Oliveira Silva, Marcos V. Colaço, Alexandre Cuin, Douglas F. Franco, Sérgio L. Scarpari, Danilo O. De Souza, Monica S. Ferreira, Ricardo O. Freire, Lippy F. Marques|2023|Opt.Mater.|137|113527|doi:10.1016/j.optmat.2023.113527
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d2w3h
title: CCDC 2207296: Experimental Crystal Structure Determination

description: Related Article: Ross Davidson, Yu-Ting Hsu, Mark A. Fox, Juan A. Aguilar, Dmitry Yufit, Andrew Beeby|2023|Inorg.Chem.|62|2793|doi:10.1021/acs.inorgchem.2c03934
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dq48k
title: CCDC 2225808: Experimental Crystal Structure Determination

description: Related Article: Haru Hirai, Takuya Nakashima, Shinjiro Takano, Yukatsu Shichibu, Katsuaki Konishi, Tsuyoshi Kawai, Tatsuya Tsukuda|2023|J.Mater.Chem.C|11|3095|doi:10.1039/D2TC05321G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22186066
title: Neogene Redbed data.xlsx

description: Column A- sample name<br> Column B- Region of Iceland that sample is from<br> Column C-D- Geographic coordinates<br> Column E- elevation<br> Column F- sample description<br> Column G- sample approximate thickness<br> Column H- sample stratigraphic age<br> Column I-R- major element XRF data volatile-free normalized<br> Column S-AD- trace element XRF data<br> Column AE- deuterium (dD) stable isotope data of authigenic clay separates
DOI: 10.6084/m9.figshare.22186066.v1
title: Neogene Redbed data.xlsx

description: Column A- sample name<br> Column B- Region of Iceland that sample is from<br> Column C-D- Geographic coordinates<br> Column E- elevation<br> Column F- sample description<br> Column G- sample approximate thickness<br> Column H- sample stratigraphic age<br> Column I-R- major element XRF data volatile-free normalized<br> Column S-AD- trace element XRF data<br> Column AE- deuterium (dD) stable isotope data of authigenic clay separates
DOI: 10.6084/m9.figshare.22186066.v2
title: Neogene Redbed data.xlsx

description: Column A- sample name<br> Column B- Region of Iceland that sample is from<br> Column C-D- Geographic coordinates<br> Column E- elevation<br> Column F- sample description<br> Column G- sample approximate thickness<br> Column H- sample stratigraphic age<br> Column I-R- major element XRF data volatile-free normalized<br> Column S-AD- trace element XRF data<br> Column AE- deuterium (dD) stable isotope data of authigenic clay separates
DOI: 10.25378/janelia.17777888.v4
title: Whole transcriptome annotation files

description: These are the manually corrected BRAKER annotations in GFF3 format, from Table S5 of "Gene Structure-Based Homology Search Identifies Highly Divergent Putative Effector Gene Family", Stern and Han, https://doi.org/10.1093/gbe/evac069 <br> Please contact Clair Han at hanc@janelia.hhmi.org with any questions.<br> See related materials in collection at: https://doi.org/10.25378/janelia.c.5778905. <br> Updates: <br> <strong>Hormaphis cornus</strong> GFF (7/26/22): -The manuscript lists Augustus.updated_w_annots.19viii21_final.gff3 as the GFF used. The correct version should be Augustus.updated_w_annots.3ix21_final.gff3. There are very few changes between these version. -This GFF has since then been further updated to Augustus.updated_w_annots.1vii22_final.gff3. Both Augustus.updated_w_annots.3ix21_final.gff3 and Augustus.updated_w_annots.1vii22_final.gff3 are provided. <br> <strong>Tetraneura nigriabdominalis</strong> GFF (2/25/23): -The manuscript uses Tnig.Augustus.updated_w_annots.7vii21.gff3. -However, the compatible GFF to be used with our genome on Genbank (accession JAIUCT000000000) is Tnig.Augustus.updated_w_annots.7vii21_genbank_final.gff3. The discrepancy is due to changes in the reference genome contig names in the Genbank upload. Both GFFs are provided. -Alternatively, the manuscript GFF could be used with the Genbank reference genome using the contig names conversion table available on Genbank: https://www.ncbi.nlm.nih.gov/Traces/wgs/JAIUCT01?display=contigs <br>
DOI: 10.25378/janelia.17777888.v3
title: Whole transcriptome annotation files

description: These are the manually corrected BRAKER annotations in GFF3 format, from Table S5 of "Gene Structure-Based Homology Search Identifies Highly Divergent Putative Effector Gene Family", Stern and Han, https://doi.org/10.1093/gbe/evac069 <br> Please contact Clair Han at hanc@janelia.hhmi.org with any questions.<br> See related materials in collection at: https://doi.org/10.25378/janelia.c.5778905. <br> Please note update for <strong>Hormaphis cornus</strong> GFF (7/26/22): -The manuscript lists Augustus.updated_w_ annots.19viii21_final.gff3 as the GFF used. The correct version should be Augustus.updated_w_annots.3ix21_final.gff3. There are very few changes between these version. -This GFF has since then been further updated to Augustus.updated_w_annots.1vii22_final.gff3. Both Augustus.updated_w_annots.3ix21_final.gff3 and Augustus.updated_w_annots.1vii22_final.gff3 are provided. <br>
DOI: 10.25378/janelia.17777888
title: Whole transcriptome annotation files

description: These are the manually corrected BRAKER annotations in GFF3 format, from Table S5 of "Gene Structure-Based Homology Search Identifies Highly Divergent Putative Effector Gene Family", Stern and Han, https://doi.org/10.1093/gbe/evac069 <br> Please contact Clair Han at hanc@janelia.hhmi.org with any questions.<br> See related materials in collection at: https://doi.org/10.25378/janelia.c.5778905. <br> Updates: <br> <strong>Hormaphis cornus</strong> GFF (7/26/22): -The manuscript lists Augustus.updated_w_annots.19viii21_final.gff3 as the GFF used. The correct version should be Augustus.updated_w_annots.3ix21_final.gff3. There are very few changes between these version. -This GFF has since then been further updated to Augustus.updated_w_annots.1vii22_final.gff3. Both Augustus.updated_w_annots.3ix21_final.gff3 and Augustus.updated_w_annots.1vii22_final.gff3 are provided. <br> <strong>Tetraneura nigriabdominalis</strong> GFF (2/25/23): -The manuscript uses Tnig.Augustus.updated_w_annots.7vii21.gff3. -However, the compatible GFF to be used with our genome on Genbank (accession JAIUCT000000000) is Tnig.Augustus.updated_w_annots.7vii21_genbank_final.gff3. The discrepancy is due to changes in the reference genome contig names in the Genbank upload. Both GFFs are provided. -Alternatively, the manuscript GFF could be used with the Genbank reference genome using the contig names conversion table available on Genbank: https://www.ncbi.nlm.nih.gov/Traces/wgs/JAIUCT01?display=contigs <br>
DOI: 10.6084/m9.figshare.22148975
title: spatio-temporal-infection_abortive

description: processed anndata file of the spatio-temporal single-cell atlas of the Plasmodium liver stage (Afriat et al., <em>Nature</em> <strong>611</strong>, 563–569 (2022)) as processed here to include infected cells from late time points (24, 30 and 36 hpi).
DOI: 10.6084/m9.figshare.22148975.v1
title: spatio-temporal-infection_abortive

description: processed anndata file of the spatio-temporal single-cell atlas of the Plasmodium liver stage (Afriat et al., <em>Nature</em> <strong>611</strong>, 563–569 (2022)) as processed here to include infected cells from late time points (24, 30 and 36 hpi).
DOI: 10.6084/m9.figshare.22082699.v3
title: Cuadro suplementario 1. Caracteristicas asociadas a lácteos totales..docx

description: Anexo 1.
DOI: 10.6084/m9.figshare.22082699
title: Cuadro suplementario 1. Caracteristicas asociadas a lácteos totales..docx

description: Anexo 1.
DOI: 10.6084/m9.figshare.22082699.v5
title: Cuadro suplementario 1. Caracteristicas asociadas a lácteos totales..docx

description: Anexo 1.
DOI: 10.6084/m9.figshare.22082699.v4
title: Cuadro suplementario 1. Caracteristicas asociadas a lácteos totales..docx

description: Anexo 1.
DOI: 10.6084/m9.figshare.22186144
title: Emotionality, Self-efficacy, Rational- and Intuitive- thinking in Chess Expertise (Dataset).sav

description: The database is part of an explorational study, involving competitive chess players from Hungary and Romania, with the aim to investigate the role of emotionality, self-efficacy, rational- and inuitive thinking in chess expertise. The study uses a demographic questionnaire, HEXACO Emotionality Scale, General Self Efficacy Scale and Rational Experiental Inventory. Participants are divided into two groups, based on the ELO scoring system. Using binary logistic regression, we assess how much effect does emotionality, self-efficacy, rational- and inuitive thinking have on the level of one’s chess playing skills.
DOI: 10.5281/zenodo.7681111
title: pagurus_hirsutiusculus_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7681110
title: pagurus_hirsutiusculus_zanfona_1.fasta.gz

description: .
DOI: 10.18712/10.18712/norlag_v3
title: Den norske studien av livsløp, aldring og generasjon - NorLAG 2002-2017

description: NorLAG er en studie som gir ny kunnskap om aldring og eldre år i Norge. Så langt er det gjennomført tre runder med datainnsamling (2002, 2007 og 2017). Studien belyser sentrale livsområder til personer født mellom 1922 og 1966 og deres nære familiemedlemmer (partner, foreldre og barn). Spørreskjemadata kobles til årlige registerdata. Denne kombinasjonen av data gir unike muligheter for forskere fra ulike disipliner til å studere årsaker og konsekvenser av tidspunkt og rekkefølge for overganger som preger andre halvdel av livet. NorLAG data er gratis tilgjengelig for forskningsformål. I tillegg til en basismodul med nøkkelopplysninger om respondenten (f.eks. kjønn, fødselsår), er dataene organisert i 18 moduler som dekker følgende hovedområder: (1) Familie og sosiale nettverk; (2) Arbeid og aktiviteter; og (3) Helse, velvære og verdier. Familie og sosiale nettverk Barn (CH) Partner (PA) Foreldre (PT) Familie og nettverk (FN) Hushold (HH) Sivil status (register) Bolig og bomiljø (HE) Arbeid og aktiviteter Arbeid og pensjonering (WR) Aktiviteter (AC) FD-Trygd: Sykefravær, AAP og pensjon (register) Utdanning (register) Inntekt (register) Helse, velvære og verdier Helse og omsorg (HC) Velvære (WB) Personlighet (PC) Verdier og holdninger (VA) Livshendelser (LE)
DOI: 10.25573/data.20235462.v1
title: Collection of datasets - Scaling of indirect defenses in Central American swollen thorn acacias

description: Collection of three datasets for the experiments presented in the article: Scaling of indirect defenses in Central American swollen thorn acacias.<br> Dataset 01.ScalingDatasetByTree - contains the measurements of ant-rewards in <em>Vachellia collinsii </em>trees occupied by <em>Pseudomyrmex spinicola</em> ants or by <em>Crematogaster crinosa, </em>at two locations. These are averaged values of rewards for each tree, and the plant diameter. <br> Dataset 02.ScalingDatasetByNodet - contains the measurements of ant-rewards in <em>Vachellia collinsii</em> trees occupied by <em>Pseudomyrmex spinicola</em> or by <em>Crematogaster crinosa, </em>at two locations. <br> Each dataset (csv) has a corresponding metadata file explaining each column and the units used.
DOI: 10.25573/data.20235462
title: Collection of datasets - Scaling of indirect defenses in Central American swollen thorn acacias

description: Collection of three datasets for the experiments presented in the article: Scaling of indirect defenses in Central American swollen thorn acacias.<br> Dataset 01.ScalingDatasetByTree - contains the measurements of ant-rewards in <em>Vachellia collinsii </em>trees occupied by <em>Pseudomyrmex spinicola</em> ants or by <em>Crematogaster crinosa, </em>at two locations. These are averaged values of rewards for each tree, and the plant diameter. <br> Dataset 02.ScalingDatasetByNodet - contains the measurements of ant-rewards in <em>Vachellia collinsii</em> trees occupied by <em>Pseudomyrmex spinicola</em> or by <em>Crematogaster crinosa, </em>at two locations. <br> Each dataset (csv) has a corresponding metadata file explaining each column and the units used.
DOI: 10.25573/data.16702273.v1
title: Dataset - Three neotropical bird species shift nest-site preferences from swollen-thorn acacias to other sites in human-altered habitats

description: The Excel file includes four datasheets. · #Nests_trees: refers to the observed number of bird nests by tree species in the different habitats. It also includes nests placed on electrical wires or electricity poles. The spreadsheet includes the expected number of nests, calculated from the proportional abundance at each habitat, and the standardized residuals (standardized difference between observed and expected values) · #Nests_ants: it includes the number of bird nests on swollen-thorn acacias (Vachellia collinsii), and the ant species nesting inhabiting it, and separated by the sampled habitats. · Tree_abundance includes the number of trees by habitat of the 15 species where at least one of the three birds of interest nested on. All other censused trees are in the category "Other". · Acacia-ant_abundance includes the number of ant-species by habitat that were associated with an acacia tree in which were at least one bird nest of interest.
DOI: 10.25573/data.16702273
title: Dataset - Three neotropical bird species shift nest-site preferences from swollen-thorn acacias to other sites in human-altered habitats

description: The Excel file includes four datasheets. · #Nests_trees: refers to the observed number of bird nests by tree species in the different habitats. It also includes nests placed on electrical wires or electricity poles. The spreadsheet includes the expected number of nests, calculated from the proportional abundance at each habitat, and the standardized residuals (standardized difference between observed and expected values) · #Nests_ants: it includes the number of bird nests on swollen-thorn acacias (Vachellia collinsii), and the ant species nesting inhabiting it, and separated by the sampled habitats. · Tree_abundance includes the number of trees by habitat of the 15 species where at least one of the three birds of interest nested on. All other censused trees are in the category "Other". · Acacia-ant_abundance includes the number of ant-species by habitat that were associated with an acacia tree in which were at least one bird nest of interest.
DOI: 10.6084/m9.figshare.22148900
title: spatio-temporal-infection_infected

description: processed anndata file of the spatio-temporal single-cell atlas of the Plasmodium liver stage (Afriat et al., <em>Nature</em> <strong>611</strong>, 563–569 (2022)) as processed here to include infected and uninfected hepatocytes from injected mice, as well as hepatocytes from control mice.
DOI: 10.6084/m9.figshare.22148900.v1
title: spatio-temporal-infection_infected

description: processed anndata file of the spatio-temporal single-cell atlas of the Plasmodium liver stage (Afriat et al., <em>Nature</em> <strong>611</strong>, 563–569 (2022)) as processed here to include infected and uninfected hepatocytes from injected mice, as well as hepatocytes from control mice.
DOI: 10.22003/xfel.eu-data-004656-00
title: RELOC commissioning
DOI: 10.6084/m9.figshare.22122701
title: sciplex3

description: sci-Plex 3 perturbation dataset from Srivatsan et al. 2019, curated for perturbation modeling.
DOI: 10.5281/zenodo.7616852
title: Global Dam Tracker: A database of more than 35,000 dams with location, catchment, and attribute information

description: <strong>Citation</strong> Zhang, Alice Tianbo, and Vincent Xinyi Gu. 2023. “Global Dam Tracker: A Database of More than 35,000 Dams with Location, Catchment, and Attribute Information.” <em>Scientific Data</em> 10 (1): 111. https://www.nature.com/articles/s41597-023-02008-2 <strong>Description</strong> We present one of the most comprehensive geo-referenced global dam databases to date. The Global Dam Tracker (GDAT) contains 35,000 dams with cross-validated geo-coordinates, satellite-derived catchment areas, and detailed attribute information. Combining GDAT with fine-scaled satellite data spanning three decades, we demonstrate how GDAT improves upon existing databases to enable the inter-temporal analysis of the costs and benefits of dam construction on a global scale. Our findings show that over the past three decades, dams have contributed to a dramatic increase in global surface water coverage, especially in developing countries in Asia and South America. This is an important step toward a more systematic understanding of the worldwide impact of dams on local communities. By filling in the data gap, GDAT would help inform a more sustainable and equitable approach to energy access and economic development.
DOI: 10.5281/zenodo.7616851
title: Global Dam Tracker: A database of more than 35,000 dams with location, catchment, and attribute information

description: <strong>Citation</strong> Zhang, Alice Tianbo, and Vincent Xinyi Gu. 2023. “Global Dam Tracker: A Database of More than 35,000 Dams with Location, Catchment, and Attribute Information.” <em>Scientific Data</em> 10 (1): 111. https://www.nature.com/articles/s41597-023-02008-2 <strong>Description</strong> We present one of the most comprehensive geo-referenced global dam databases to date. The Global Dam Tracker (GDAT) contains 35,000 dams with cross-validated geo-coordinates, satellite-derived catchment areas, and detailed attribute information. Combining GDAT with fine-scaled satellite data spanning three decades, we demonstrate how GDAT improves upon existing databases to enable the inter-temporal analysis of the costs and benefits of dam construction on a global scale. Our findings show that over the past three decades, dams have contributed to a dramatic increase in global surface water coverage, especially in developing countries in Asia and South America. This is an important step toward a more systematic understanding of the worldwide impact of dams on local communities. By filling in the data gap, GDAT would help inform a more sustainable and equitable approach to energy access and economic development.
DOI: 10.34740/kaggle/dsv/5077104
title: Unleashing Social Sentiments: A Twitter Analysis
DOI: 10.6084/m9.figshare.22186246
title: summary_table.pkl

description: Strategy model fits
DOI: 10.6084/m9.figshare.22186246.v1
title: summary_table.pkl

description: Strategy model fits
DOI: 10.6084/m9.figshare.3761562.v2510
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5517/ccdc.csd.cc2dq49l
title: CCDC 2225809: Experimental Crystal Structure Determination

description: Related Article: Haru Hirai, Takuya Nakashima, Shinjiro Takano, Yukatsu Shichibu, Katsuaki Konishi, Tsuyoshi Kawai, Tatsuya Tsukuda|2023|J.Mater.Chem.C|11|3095|doi:10.1039/D2TC05321G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22179071.v5
title: Supplementary material of the project "Understanding the role of ectopic recombination of subtelomeres in the generation of antigenic gene diversity in Plasmodium parasites"

description: <strong>Supplementary material datasets: </strong> <strong>Dataset 1:</strong> Database for phylogenetic reconstruction of the genus <em>Plasmodium.</em> <strong>Dataset 2:</strong> Trees of the genus <em>Plasmodium</em> generated with six phylogenetic tools (Majority-rule consensus tree of the 6 trees obtained). <strong>Dataset 3:</strong> Database for chromosome mapping of gene conservation. <strong>Dataset 4:</strong> List of predominant gene families in young regions per species. <strong>Dataset 5: </strong>Classification of gene families (with the highest number of sequences in young regions) based on the nature of its products. <strong>Supplementary material 1:</strong> <strong>Table S1: </strong> Criteria to define the four levels in which <em>Plasmodium</em> species are classified based on evidence of the intensity of production of antigenic diversity through ectopic recombination. <strong>Table S2:</strong> Number of species present in each major clade and in their respective minor clades. <strong>Figure S1:</strong> Proportion of species-specific or young genes excluded from chromosome mapping analysis. <strong>Supplementary material 2: </strong> Chromosome maps showing the gene conservation profile, presence of young regions, and distribution of antigenic genes in 19 <em>Plasmodium</em> species. <em>P. adleri</em> (Page 1) <em>P. berghei </em>(Page 2) <em>P. billcollinsi</em> (Page 3) <em>P. blacklocki</em> (Page 4) <em>P. chabaudi</em> chabaudi (Page 5) <em>P. coatneyi </em>(Page 6) <em>P. cynomolgi </em>(Page 7) <em>P. falciparum</em> (Page 8) <em>P. gaboni </em>(Page 9) <em>P. knowlesi</em> (Page 10) <em>P. malariae</em> (Page 11) <em>P. ovale curtisi </em>(Page 12) <em>P. praefalciparum</em> (Page 13) <em>P. reichenowi</em> (Page 14) <em>P. relictum</em> (Page 15) <em>P. vivax-like</em> (Page 16) <em>P. vivax</em> (Page 17) <em>P. vinckei vinckei</em> (Page 18) <em>P. yoelii yoelii </em>(Page 19)
DOI: 10.5281/zenodo.7675926
title: Precariously balanced rock photo archive from Meadowcliff Canyon, California.

description: Photo archive of field surveys of Meadowcliff Canyon, CA. Images were taken in 1996 and 2022 that document precariously balanced rocks near active normal faults. The 2022 photos were taken after the M6.0 Antelope Valley earthquake occurred in July 2021, with a hypocenter several kilometers to the south.
DOI: 10.5281/zenodo.7675927
title: Precariously balanced rock photo archive from Meadowcliff Canyon, California.

description: Photo archive of field surveys of Meadowcliff Canyon, CA. Images were taken in 1996 and 2022 that document precariously balanced rocks near active normal faults. The 2022 photos were taken after the M6.0 Antelope Valley earthquake occurred in July 2021, with a hypocenter several kilometers to the south.
DOI: 10.5281/zenodo.7682807
title: Precariously balanced rock photo archive from Meadowcliff Canyon, California.

description: Photo archive of field surveys of Meadowcliff Canyon, CA. Images were taken in 1996 and 2022 that document precariously balanced rocks near active normal faults. The 2022 photos were taken after the M6.0 Antelope Valley earthquake occurred in July 2021, with a hypocenter several kilometers to the south.
DOI: 10.5281/zenodo.7682953
title: Precariously balanced rock photo archive from Meadowcliff Canyon, California.

description: Photo archive of field surveys of Meadowcliff Canyon, CA. Images were taken in 1996 and 2022 that document precariously balanced rocks near active normal faults. The 2022 photos were taken after the M6.0 Antelope Valley earthquake occurred in July 2021, with a hypocenter several kilometers to the south.