cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19936334
title: The prevalence of hepatitis B virus infection markers and socio-demographic risk factors in HIV-infected patients in Southern Brazil

description: IntroductionHepatitis B virus (HBV) and human immunodeficiency virus (HIV) infections are two of the world's most important infectious diseases. Our objective was to determine the hepatitis B surface antigen (HBsAg) and hepatitis B core antibody (anti-HBc) prevalences among adult HIV-infected patients and identify the associations between socio-demographic variables and these HBV infection markers.MethodsThis study was performed from October 2012 to March 2013. Three hundred HIV-seropositive patients were monitored by the Clinical Analysis Laboratory of Professor Polydoro Ernani de São Thiago University Hospital, Santa Catarina, Brazil. The blood tests included HBsAg, anti-HBc immunoglobulin M (IgM) and total anti-HBc. Patients reported their HIV viral loads and CD4+ T-cell counts using a questionnaire designed to collect sociodemographic data.ResultsThe mean patient age was 44.6 years, the mean CD4 T-cell count was 525/mm3, the mean time since beginning antiretroviral therapy was 7.6 years, and the mean time since HIV diagnosis was 9.6 years. The overall prevalences of HBsAg and total anti-HBc were 2.3% and 29.3%, respectively. Among the individuals analyzed, 0.3% were positive for HBsAg, 27.3% were positive for total anti-HBc, and 2.0% were positive either for HBsAg or total anti-HBc and were classified as chronically HBV-infected. Furthermore, 70.3% of the patients were classified as never having been infected. Male gender, age &gt;40 years and Caucasian ethnicity were associated with an anti-HBc positive test.ConclusionsThe results showed an intermediate prevalence of HBsAg among the studied patients. Moreover, the associations between the anti-HBc marker and socio-demographic factors suggest a need for HBV immunization among these HIV-positive individuals, who are likely to have HIV/HBV coinfection.
DOI: 10.6084/m9.figshare.19936334.v1
title: The prevalence of hepatitis B virus infection markers and socio-demographic risk factors in HIV-infected patients in Southern Brazil

description: IntroductionHepatitis B virus (HBV) and human immunodeficiency virus (HIV) infections are two of the world's most important infectious diseases. Our objective was to determine the hepatitis B surface antigen (HBsAg) and hepatitis B core antibody (anti-HBc) prevalences among adult HIV-infected patients and identify the associations between socio-demographic variables and these HBV infection markers.MethodsThis study was performed from October 2012 to March 2013. Three hundred HIV-seropositive patients were monitored by the Clinical Analysis Laboratory of Professor Polydoro Ernani de São Thiago University Hospital, Santa Catarina, Brazil. The blood tests included HBsAg, anti-HBc immunoglobulin M (IgM) and total anti-HBc. Patients reported their HIV viral loads and CD4+ T-cell counts using a questionnaire designed to collect sociodemographic data.ResultsThe mean patient age was 44.6 years, the mean CD4 T-cell count was 525/mm3, the mean time since beginning antiretroviral therapy was 7.6 years, and the mean time since HIV diagnosis was 9.6 years. The overall prevalences of HBsAg and total anti-HBc were 2.3% and 29.3%, respectively. Among the individuals analyzed, 0.3% were positive for HBsAg, 27.3% were positive for total anti-HBc, and 2.0% were positive either for HBsAg or total anti-HBc and were classified as chronically HBV-infected. Furthermore, 70.3% of the patients were classified as never having been infected. Male gender, age &gt;40 years and Caucasian ethnicity were associated with an anti-HBc positive test.ConclusionsThe results showed an intermediate prevalence of HBsAg among the studied patients. Moreover, the associations between the anti-HBc marker and socio-demographic factors suggest a need for HBV immunization among these HIV-positive individuals, who are likely to have HIV/HBV coinfection.
DOI: 10.6084/m9.figshare.19936333.v1
title: Analysis of the prevalence of dyslipidemia in individuals with HIV and its association with antiretroviral therapy

description: IntroductionAntiretroviral therapy (ART) has been used to treat large numbers of patients living with human immunodeficiency virus (HIV) infection. Lipid disorders are often observed in these patients, and include elevations in total cholesterol (TC) and triglycerides (TG).MethodsA cross-sectional study was performed using 333 patient records from the Regional Hospital of São José Doutor Homero de Miranda Gomes (HRSJHMG). The study population consisted of patients with HIV who were under medical follow up, either on or off drug treatment. The data were entered into Excel and exported to SPSS 16.0 for analysis using chi-square testing. We used prevalence ratios as the measure of association.ResultsLipid abnormalities were observed in 78.9% of individuals who received ART. Of the 308 subjects on ART, 59.1%, 41.9%, and 33.1% had TG, TC and low-density lipoprotein (LDL) abnormalities, respectively. The prevalence of LDL changes was 2.57-fold higher in individuals who had been using ART for more than 12 months, compared to those using ART for 6 to 12 months.ConclusionsHIV patients showed a significant increase in the association between TC and TG levels and the use of ART. In particular, changes in TC, LDL and TG were greater in individuals who had received ART for over more than 12 months.
DOI: 10.17632/fx79d55fpm.1
title: Knowledge and practice of complementary feeding among the mothers of the child aged  group 06-24 months in Dar es Salam, Tanzania.

description: These data in SPSS format comprise the information of nursing mothers under the study title "knowledge and practice of complementary feeding among the mothers of children aged 6–24 months in Dar es Salam, Tanzania." This data has the following research hypothesis: 1. The age of the mother is associated with the initiation of complementary foods below the age of 6 months. 
2. Education of the mother has a positive influence on knowledge and feeding practices.
3. Household income influences meal frequency 
4. The occupation of mothers has a positive influence on the feeding practices of mothers.
5. Involvement of the father in the feeding of the child may help to increase the timely introduction of complementary foods.
This data is a community, household-based cross-sectional study that was conducted among healthy nursing mothers who have children in the age group of 06–24 months in the Kinondoni municipal area, Dar es Salaam, Tanzania. The study was conducted from February 2022 to March 2022, where multistage sampling was used to select study participants.
This data can be used to analyze knowledge, practice, and associated factors for complementary feeding among nursing mothers who have children of the age group 6-24 months in Dar es Salaam, Tanzania.
DOI: 10.17632/sszg8fpkcn.1
title: Development of acne/folliculitis secondary to tofacitinib treatment for alopecia areata_Supplemental Table I

description: Development of acne/folliculitis secondary to tofacitinib treatment for alopecia areata
Supplemental Table I. Previous studies that have reported Janus kinase inhibitors-induced acne/folliculitis in patients with alopecia areata
DOI: 10.17632/4g6frzr4gs.1
title: A retrospective study : Apolipoprotein B displays superior predictive value than other lipids for long-term   prognosis in coronary atherosclerosis patients and particular subpopulations

description: We revealed that apoB could be “risk-enhancing factor” in the patients with coronary atherosclerosis disease, while in the Normal population, LDL-C still acts as a major risk factor for predicting MACEs events.  ApoB is a good predictor for long-term cardiovascular events in coronary atherosclerosis disease including AS group and CHD subpopulations (including CHD+DM, CHD+BMI≥25 and CHD+MS). ApoB is superior to other lipids in predicting the presence of myocardial infarction, hospitalization due to angina, cardiac death, particularly in CHD patients who complicated with diabetes, obesity and metabolic syndrome. Despite achieving optimal LDL-C or non-HDL-C level, CHD patients are still at risk of worse survival if they didn’t reach the tighter apoB control level (lower cut points like 65mg/dL). More attention should be paid to special populations with residual elevations of atherogenic particle numbers, and focusing on lowering base-line apoB helps achieving more long-term benefits.
DOI: 10.6084/m9.figshare.19936358.v1
title: Effects of piperonyl butoxide on the toxicity of the organophosphate temephos and the role of esterases in the insecticide resistance of Aedes aegypti

description: IntroductionThe effects of piperonyl butoxide (PBO) on the toxicity of the organophosphate temephos (TE) and the role of esterases in the resistance of Aedes aegypti to this insecticide were evaluated.MethodsA. aegypti L4 larvae susceptible and resistant to TE were pre-treated with PBO solutions in acetone at concentrations of 0.125, 0.25, 0.5, 1, and 2% for 24h and subsequently exposed to a diagnostic concentration of 0.02mg/L aqueous TE solution. The esterase activity of the larvae extracts pre-treated with varying PBO concentrations and exposed to TE for three time periods was determined.ResultsAt concentrations of 0.25, 0.5, 1, and 2%, PBO showed a significant synergistic effect with TE toxicity. High levels of esterase activity were associated with the survival of A. aegypti L4 larvae exposed to TE only.ConclusionsThe results of the biochemical assays suggest that PBO has a significant inhibitory effect on the total esterase activity in A. aegypti larvae.
DOI: 10.6084/m9.figshare.19936358
title: Effects of piperonyl butoxide on the toxicity of the organophosphate temephos and the role of esterases in the insecticide resistance of Aedes aegypti

description: IntroductionThe effects of piperonyl butoxide (PBO) on the toxicity of the organophosphate temephos (TE) and the role of esterases in the resistance of Aedes aegypti to this insecticide were evaluated.MethodsA. aegypti L4 larvae susceptible and resistant to TE were pre-treated with PBO solutions in acetone at concentrations of 0.125, 0.25, 0.5, 1, and 2% for 24h and subsequently exposed to a diagnostic concentration of 0.02mg/L aqueous TE solution. The esterase activity of the larvae extracts pre-treated with varying PBO concentrations and exposed to TE for three time periods was determined.ResultsAt concentrations of 0.25, 0.5, 1, and 2%, PBO showed a significant synergistic effect with TE toxicity. High levels of esterase activity were associated with the survival of A. aegypti L4 larvae exposed to TE only.ConclusionsThe results of the biochemical assays suggest that PBO has a significant inhibitory effect on the total esterase activity in A. aegypti larvae.
DOI: 10.17632/kysvwvcxmf.2
title: The dataset of Japanese patents and patents’ holding firms in green vehicle powertrains field

description: A Japanese patents dataset of the vehicle powertrain systems for hybrid electric vehicle (HEV), battery electric vehicle (BEV) and fuel cell electric vehicles (FCEV).
Identify green patents using patents’ IPC classification and keywords in description document (title and abstract).
Comparison tables of searching keywords and patents’ holding firms’ names between English and Japanese
DOI: 10.6084/m9.figshare.19936364.v1
title: Evaluation of constitutive and inducible resistance to clindamycin in clinical samples of Staphylococcus aureus from a tertiary hospital

description: IntroductionInfections caused by methicillin-resistant Staphylococcus aureus (MRSA) have become common in hospitals and the community environment, and this wide resistance has limited patient treatment. Clindamycin (CL) represents an important alternative therapy for infections caused by S. aureus. Antimicrobial susceptibility testing using standard methods may not detect inducible CL resistance. This study was performed to detect the phenotypes of resistance to macrolides-lincosamides-streptogramin B (MLSB) antibiotics, including CL, in clinical samples of S. aureusfrom patients at a tertiary hospital in Santa Maria, State of Rio Grande do Sul, Brazil.MethodsOne hundred and forty clinical isolates were submitted to the disk diffusion induction test (D-test) with an erythromycin (ER) disk positioned at a distance of 20mm from a CL disk. The results were interpreted according to the recommendations of the Clinical and Laboratory Standards Institute (CLSI).ResultsIn this study, 29 (20.7%) of the 140 S. aureus samples were resistant to methicillin (MRSA), and 111 (79.3%) were susceptible to methicillin (MSSA). The constitutive resistance phenotype (cMLSB) was observed in 20 (14.3%) MRSA samples and in 5 (3.6%) MSSA samples, whereas the inducible resistance phenotype (iMLSB) was observed in 3 (2.1%) MRSA samples and in 8 (5.8%) MSSA samples.ConclusionsThe D-test is essential for detecting the iMLSBphenotype because the early identification of this phenotype allows clinicians to choose an appropriate treatment for patients. Furthermore, this test is simple, easy to perform and inexpensive.
DOI: 10.6084/m9.figshare.19936364
title: Evaluation of constitutive and inducible resistance to clindamycin in clinical samples of Staphylococcus aureus from a tertiary hospital

description: IntroductionInfections caused by methicillin-resistant Staphylococcus aureus (MRSA) have become common in hospitals and the community environment, and this wide resistance has limited patient treatment. Clindamycin (CL) represents an important alternative therapy for infections caused by S. aureus. Antimicrobial susceptibility testing using standard methods may not detect inducible CL resistance. This study was performed to detect the phenotypes of resistance to macrolides-lincosamides-streptogramin B (MLSB) antibiotics, including CL, in clinical samples of S. aureusfrom patients at a tertiary hospital in Santa Maria, State of Rio Grande do Sul, Brazil.MethodsOne hundred and forty clinical isolates were submitted to the disk diffusion induction test (D-test) with an erythromycin (ER) disk positioned at a distance of 20mm from a CL disk. The results were interpreted according to the recommendations of the Clinical and Laboratory Standards Institute (CLSI).ResultsIn this study, 29 (20.7%) of the 140 S. aureus samples were resistant to methicillin (MRSA), and 111 (79.3%) were susceptible to methicillin (MSSA). The constitutive resistance phenotype (cMLSB) was observed in 20 (14.3%) MRSA samples and in 5 (3.6%) MSSA samples, whereas the inducible resistance phenotype (iMLSB) was observed in 3 (2.1%) MRSA samples and in 8 (5.8%) MSSA samples.ConclusionsThe D-test is essential for detecting the iMLSBphenotype because the early identification of this phenotype allows clinicians to choose an appropriate treatment for patients. Furthermore, this test is simple, easy to perform and inexpensive.
DOI: 10.48370/ofd/heeprk/ujql7d
title: FMW Gloiothele lactescens (Berk.) Hjortstam M-3852 (3).JPG

description: :unav
DOI: 10.48370/ofd/heeprk/svnm1e
title: FMW Gloiothele lactescens (Berk.) Hjortstam M-3852.JPG

description: :unav
DOI: 10.48370/ofd/heeprk/gpgiva
title: FMW Gloiothele lactescens (Berk.) Hjortstam M-3852 (2).JPG

description: :unav
DOI: 10.48370/ofd/heeprk
title: Gloiothele lactescens (Berk.) Hjortstam, 3852

description: Fungarium Macromycetes
DOI: 10.48370/ofd/z79mqy/psc0jp
title: FMW Gloiothele lactescens (Berk.) Hjortstam M-4849.JPG

description: :unav
DOI: 10.48370/ofd/z79mqy/mxzzo5
title: FMW Gloiothele lactescens (Berk.) Hjortstam M-4849 (3).JPG

description: :unav
DOI: 10.48370/ofd/z79mqy/krx3dc
title: FMW Gloiothele lactescens (Berk.) Hjortstam M-4849 (2).JPG

description: :unav
DOI: 10.48370/ofd/z79mqy
title: Gloiothele lactescens (Berk.) Hjortstam, 4849

description: Fungarium Macromycetes
DOI: 10.17632/bh47n6fnpd.1
title: Fast and highly sensitive full-length single-cell RNA-sequencing using FLASH-seq

description: https://www.nature.com/articles/s41587-022-01312-3

Plate-based single-cell RNA-sequencing methods provide high transcriptome coverage and full-length mRNA information but have limited throughput. We present FLASH-seq (FS), a full-length scRNA-seq method with increased sensitivity and reduced hands-on time compared to Smart-Seq3. The entire FS protocol can be performed in ~4.5 hours, is simple to automate and can be easily miniaturized to decrease resource consumption. ​​
In addition, the FS protocol can takes advantage of Unique Molecular Identifiers (UMIs) for molecule counting and display reduced strand-invasion artefacts. We expect FS to become the tool of choice when the characterization of gene expression at high-resolution across multiple cell types and tissues is required.

The following folders contain the table of counts and extra files associated with the manuscript "Fast and highly sensitive full-length single-cell RNA-sequencing using FLASH-seq" (10.1038/s41587-022-01312-3). Please contact us if something is missing or if some clarifications is required. 

Notes: 

1. ".rds" files were generated in R v4.1 with "write_rds" (readr, v2.0.0) and can be read with the "read_rds" function (readr).
2. The code associated to these files can be found at: https://github.com/vincenthahaut/FLASH-Seq
3. Tables of counts provided here are not meant to replace the actual raw data that can be found here in NCBI SRA: PRJNA816486. If you want to repeat the analysis we advice you to start from the raw data whenever possible.
DOI: 10.17632/72x4y58p8z.1
title: chemical composition and hygroscopicity data_Beijing

description: This is the data used in the paper of “Ren, J., Zhang, F., Chen, L., Liu, J. The density of ambient black carbon retrieved by a new method and implications on predicting cloud nuclei concentrations . Geophysical Research Letters”
DOI: 10.6084/m9.figshare.19936382
title: Awareness of visceral leishmaniasis and its relationship to canine infection in riverside endemic areas in Northeastern Brazil

description: IntroductionAn awareness of visceral leishmaniasis (VL) is necessary to encourage the population to participate in prevention and control in collaboration with more efficient, centrally organized health programs. The aim of this study was to evaluate the awareness of the riverside population regarding VL and the association between awareness and the prevalence of canine visceral leishmaniasis (CVL).MethodsIn total, 71 people living in riverside areas in the City of Mossoró in State of Rio Grande do Norte participated of the study, and 71 dogs were tested for CVL by polymerase chain reaction (PCR). Association analysis of several variables related to knowledge of the riverside population regarding CVL positivity was performed, yielding odds ratios (OR) and 95% confidence intervals (CI), and significance was determined using chi-square (χ2) and Fisher's exact tests.ResultsAmong individuals whose dogs tested positive for CVL, 60% did not know the cure for CVL, and these subjects were three times more likely to have a dog test positive for CVL than those who were aware the cure for CVL. Knowledge of CVL cure was the only variable that remained in the logistic model after the successive removal of variables, with an adjusted OR of 3.11 (95%CI: 1.1-8,799; p=0.032).ConclusionsInsufficient awareness regarding VL in riverside areas with CVL-positive dogs was associated with increased rates of canine infection, which suggests that changes in habits and the adoption of attitudes and preventive practices may contribute to the control and prevention of this disease. This study reinforces the need to invest in better health education programs regarding VL.
DOI: 10.6084/m9.figshare.19936382.v1
title: Awareness of visceral leishmaniasis and its relationship to canine infection in riverside endemic areas in Northeastern Brazil

description: IntroductionAn awareness of visceral leishmaniasis (VL) is necessary to encourage the population to participate in prevention and control in collaboration with more efficient, centrally organized health programs. The aim of this study was to evaluate the awareness of the riverside population regarding VL and the association between awareness and the prevalence of canine visceral leishmaniasis (CVL).MethodsIn total, 71 people living in riverside areas in the City of Mossoró in State of Rio Grande do Norte participated of the study, and 71 dogs were tested for CVL by polymerase chain reaction (PCR). Association analysis of several variables related to knowledge of the riverside population regarding CVL positivity was performed, yielding odds ratios (OR) and 95% confidence intervals (CI), and significance was determined using chi-square (χ2) and Fisher's exact tests.ResultsAmong individuals whose dogs tested positive for CVL, 60% did not know the cure for CVL, and these subjects were three times more likely to have a dog test positive for CVL than those who were aware the cure for CVL. Knowledge of CVL cure was the only variable that remained in the logistic model after the successive removal of variables, with an adjusted OR of 3.11 (95%CI: 1.1-8,799; p=0.032).ConclusionsInsufficient awareness regarding VL in riverside areas with CVL-positive dogs was associated with increased rates of canine infection, which suggests that changes in habits and the adoption of attitudes and preventive practices may contribute to the control and prevention of this disease. This study reinforces the need to invest in better health education programs regarding VL.
DOI: 10.25394/pgs.7439111
title: Drain flow record

description: Using the Hooghoudt equation and measured water table depths, together with linear regression method, a long-term drain flow record for a controlled drainage (CD) experiment at the Davis Purdue Agriculture Center was constructed. <b> Site description:</b> The Davis Purdue Agricultural Center (DPAC) is a research farm in eastern Indiana. The controlled drainage experimental site is the 0.16 km<sup>2</sup> field split into four quadrants, northwest (NW), southwest (SW), northeast (NE), and southeast (SE) with areas of 3.5 ha, 3.5 ha, 3.6 ha, and 3.7 ha. This field has a slope of less than 1%. Soils at the site consist of Blount (somewhat poorly drained), Condit (poorly drained), Pewamo (very poorly drained) and a small portion of Glynwood (moderately well drained) series. The drainage system was installed in 2004. Laterals have an approximate depth of 1 m and spacing of 14m. Drainage in the SE and NW quadrants was controlled during some periods while the SW and NE were allowed to freely drain at all times. A more detailed description of the methods can be found in Saadat et al. (2018).<br>
DOI: 10.25394/pgs.7439111.v1
title: Drain flow record

description: Using the Hooghoudt equation and measured water table depths, together with linear regression method, a long-term drain flow record for a controlled drainage (CD) experiment at the Davis Purdue Agriculture Center was constructed. <b> Site description:</b> The Davis Purdue Agricultural Center (DPAC) is a research farm in eastern Indiana. The controlled drainage experimental site is the 0.16 km<sup>2</sup> field split into four quadrants, northwest (NW), southwest (SW), northeast (NE), and southeast (SE) with areas of 3.5 ha, 3.5 ha, 3.6 ha, and 3.7 ha. This field has a slope of less than 1%. Soils at the site consist of Blount (somewhat poorly drained), Condit (poorly drained), Pewamo (very poorly drained) and a small portion of Glynwood (moderately well drained) series. The drainage system was installed in 2004. Laterals have an approximate depth of 1 m and spacing of 14m. Drainage in the SE and NW quadrants was controlled during some periods while the SW and NE were allowed to freely drain at all times. A more detailed description of the methods can be found in Saadat et al. (2018).<br>