cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24737013.v1
title: Performance Analysis of Artificial Intelligence Approaches for LEMP Classification

description: Each raw corresponds to a LEMP, from columns 1101 to 1111 we have the timestamp, channel, normalization factor, LEMP type, and location (1 = Belem, 2 = Gainesville, 3 = Maraba). Numerical label 1 refers to the class -CGNumerical label 2 refers to the class +CGNumerical label 3 refers to the class -CIDNumerical label 4 refers to the class +CIDNumerical label 5 refers to the class ICThe ground-truth numerical labels 6, 7, and 8 are considered as label 5, indicating the class IC
DOI: 10.6084/m9.figshare.19615578.v1
title: Long-term data

description: Abundance and richness of herbaceous plant communities in sandy soils in inner Iberian Peninsula
DOI: 10.6084/m9.figshare.3528491.v1
title: Appendix D. Results of multivariate spatial mixed model for ßz for both data sets.

description: Results of multivariate spatial mixed model for ßz for both data sets.
DOI: 10.6084/m9.figshare.23905128.v1
title: Supplementary Material for: Geometric versus hemodynamic indexes for rupture-destined aneurysms: a retrospective cohort and a repeated-measures study

description: Introduction: A proper stratification of intracranial aneurysms is critical in identifying rupture-destined aneurysms and unruptured intracranial aneurysms. We aimed to determine the utility of geometric and hemodynamic indexes in differentiating two types of aneurysms, and to examine the characteristics of natural evolutionary changes of unruptured aneurysms. Methods: Rupture-destined aneurysm refers to an aneurysm that undergoes subsequent aneurysmal subarachnoid hemorrhage (SAH). On the other hand, an unruptured intracranial aneurysm is characterized by an aneurysm that does not experience rupture during serial time-of-flight magnetic resonance angiography (TOF-MRA). In addition to geometric indexes, signal intensity gradient (SIG), an in-vivo approximated wall shear stress from TOF-MRA, was measured in aneurysms. The difference between the maximum and minimum values of SIG in an aneurysm compared to parent arterial values was designated as the delta-SIG ratio. Results: This study analyzed 20 rupture-destined aneurysms in 20 patients and 45 unruptured intracranial aneurysms in 41 patients with follow-up TOF-MRA. While geometric indexes did not show differences between the two groups, the delta-SIG ratio was higher in the rupture-destined aneurysms (1.5±0.6 vs. 1.1±0.3, P=0.032). The delta-SIG ratio showed a higher area under the receiver operating characteristics curve for SAH than the size ratio (0.72 [95% CI, 0.58–0.87] vs. 0.56 [95% CI, 0.41–0.72], P=0.033). The longitudinal re-examination of TOF-MRA in the unruptured intracranial aneurysms revealed evidence of aneurysmal growth, while concurrently exhibiting hemodynamic stability. Discussion/Conclusion: The delta-SIG ratio showed higher discriminatory results between the two groups compared to geometric indexes. Aneurysmal rupture risk should be assessed by considering both geometric and hemodynamic information. This study was registered on ClinicalTrials.gov (NCT05450939).
DOI: 10.6084/m9.figshare.24582738.v2
title: ANI-aa-qmmm Data set

description: This data set was constructed for our work entitled "Assessment of embedding schemes in a hybrid machine learning/classical potentials (ML/MM) approach" to provide an unbiased insight into the performance of different atomic partial charges and embedding schemes to reach the <i>state of the art</i> electrostatic scheme level in multiscale frameworks.This data set was constructed using all the amino acid isomer species of the ANI-1x and ANI-2x data sets (only sulfur-containing species of the last one), which corresponded to about 80k structures <i>in vacuo</i>. We complemented the previously computed properties with new sets of atomic partial charges, energies, atom types, and QM/MM properties corresponding the structures solvated in TIP3P water molecules.A README.txt file to navigate the data set is provided.
DOI: 10.6084/m9.figshare.28623989.v1
title: 密闭环境中人群的肠道微生物群概况

description: 密闭环境中人群肠道微生物群的全长 16S 测序
DOI: 10.6084/m9.figshare.20537781.v1
title: Public preferences for governing AI technology: Comparative evidence

description: Citizens’ attitudes concerning aspects of AI such as transparency, privacy, and discrimination have received considerable attention. However, it is an open question to what extent economic consequences affect preferences for public policies governing AI. When does the public demand imposing restrictions on – or even prohibiting – emerging AI technologies? Do average citizens’ preferences depend causally on normative and economic concerns or only on one of these causes? If both, how might economic risks and opportunities interact with assessments based on normative factors? And to what extent does the balance between the two kinds of concerns vary by context? I answer these questions using a comparative conjoint survey experiment conducted in Germany, the United Kingdom, India, Chile, and China. The data analysis suggests strong effects regarding AI systems’ economic and normative attributes. Moreover, I find considerable cross-country variation in normative preferences regarding the prohibition of AI systems vis-a-vis economic concerns.
DOI: 10.6084/m9.figshare.5678386.v1
title: Additional file 4 of Dorsal spine evolution in threespine sticklebacks via a splicing change in MSX2A

description: Transgenic analysis. Dorsal spine measurements of PAXB sticklebacks carrying different MSX2A transgenes. (ZIP 22 kb)
DOI: 10.6084/m9.figshare.20006248.v1
title: Comparison of two procedures of college teaching: An example of interteaching

description: Abstract The objective of this study was to compare two methods of college teaching in increasing quizzes scores. A total of 11 students were tested in the two experimental conditions, interteaching with peer discussion (IWPD) and interteaching without peer discussion (IWOPD). An alternating treatment design was used to compare both procedures. In each condition participants completed study guides before class, then in the IWPD students meet in groups to discuss and selectt eaching topics for class. This condition ended with a quiz. The other condition, IWOPD was similar to the above, except students did not meet in groups to discuss the study guides. The results show that quiz scores were higher in the ICWPD. Some educational implications are presented and futures research described.
DOI: 10.6084/m9.figshare.24650310.v1
title: Data for: Shoenberger, T.W. & Fowler-Finn, K.D. Seasonal variation in the strength and consistency of tritrophic interactions among treehoppers, plants, and ants may favor generalist relationships. 2023. Arthropod Plant Interactions.

description: Abstract: Organisms interact with numerous species in their environment, and these interactionsAQ1 can influence a variety of social and ecological processes. Thus, temporal and spatial variation in species interactions is important for understanding the fitness consequences of multi-trophic relationships. Here, we investigate how tritrophic interactions between a host plant generalist sap-feeding insect, host plant species, and ant mutualists vary in a prairie habitat. We used field transects to quantify the abundances of three host plant species, three species of ants, and the treehopper Entylia carinata. We repeated the transects from Spring until late Fall to quantify seasonal changes in abundances, and across three years to investigate stability of tritrophic relationships across years. In the first year of the study, we also measured plant height. Finally, we characterized variation in the tending behavior inof the three species of ants. We found that certain plant-ant species combinations are more common than others. Furthermore, wWhile these tritrophic associations between plants, ants, and treehoppers changed seasonally, they were largely stable across years. Furthermore, Wwe found pervasive effects of ants on E. carinata, including E. carinata presence and abundance, E. carinata aggregation size and abundance, E. carinata nest presence and abundance, and E. carinata nest-tending behavior. Plant species had fewer effects, but affected E. carinata presence and abundance as well as the likelihood of E. carinata aggregations occurring on a plant. SFinally, significant seasonal changes in ant abundances and ant tending rates create dynamic temporal variation in tritrophic interactions. The patterns observed are likely to have significant effects on E. carinata populations, and—due to the importance of ant-treehopper mutualisms in local ecosystems—cascading effects on local communities.
DOI: 10.6084/m9.figshare.27311667.v2
title: Comparison of Scapulohumeral rhythm in individuals with and without Forward Shoulder Posture

description: Data set for the project Comparison of Scapulohumeral rhythm in individuals with and without Forward Shoulder Posture
DOI: 10.6084/m9.figshare.21948542.v2
title: Land--atmosphere feedbacks contribute to crop failure in global rainfed breadbaskets [Data]

description: This project accompanies the datasets from “<strong>Land--atmosphere feedbacks contribute to crop failure in global rainfed breadbaskets</strong>”. The structure is listed below: Spatio-temporal origins of moisture and heat over the world's largest 75 rainfed breadbaskets during growing seasons from 1983--2015.zip Anomalies of atmospheric moisture and heat transports for individual breadbaskets.zip Global 75 rainfed breadbaskets.zip Processed data, e.g. crop-climate-atlas.csv
DOI: 10.6084/m9.figshare.19729636.v1
title: Eye Tracker Data

description: Eye tracker as described in the paper
DOI: 10.6084/m9.figshare.19646544.v1
title: Supplementary Material for: Senolytics Cocktail Dasatinib and Quercetin Alleviate Human Umbilical Vein Endothelial Cell Senescence via the TRAF6-MAPK-NF-κB Axis in a YTHDF2-Dependent Manner

description: <b><i>Introduction:</i></b> Senescent cells play a key role in the initiation and development of various age-related diseases. Human umbilical vein endothelial cells (HUVECs) senescence is closely associated with age-related cardiovascular diseases. Accumulating evidence has demonstrated that senolytics, the combination of dasatinib and quercetin (D+Q), could selectively eliminate senescent cells. N6-methyladenosine (m6A), the most abundant internal transcript modification, greatly influences RNA metabolism and modulates gene expression. We aimed to investigate whether RNA m6A functions in lipopolysaccharide (LPS)-induced HUVECs senescence and D+Q suppress HUVECs senescence by regulating RNA m6A. <b><i>Methods:</i></b> Senescence-associated β-galactosidase activity, western blot, and real-time quantitative polymerase chain reaction were performed to demonstrate that D+Q suppress HUVECs senescence. Methylated RNA immunoprecipitation (MeRIP)-qPCR assay and RIP-qPCR confirmed that RNA m6A plays a key role in the suppression of HUVECs senescence by D+Q. Chromatin immunoprecipitation and mRNA stability assay were carried out to prove that D+Q alleviate HUVECs senescence in a YTHDF2-dependent manner. <b><i>Results:</i></b> Here, we demonstrate that D+Q alleviate LPS-induced senescence in HUVECs via inhibiting autocrine and paracrine of the senescence-associated secretory phenotype (SASP). We further confirm that D+Q alleviate HUVECs senescence via the TNF receptor-associated factor 6 (TRAF6)-MAPK pathway. Mechanically, this study validates that D+Q suppress SASP by upregulating m6A reader YTHDF2. Besides, YTHDF2 regulates the stability of MAP2K4 and MAP4K4 mRNAs. <b><i>Conclusion:</i></b> Collectively, we first identified that D+Q alleviate LPS-induced senescence in HUVECs via the TRAF6-MAPK-NF-κB axis in a YTHDF2-dependent manner, providing novel ideas for clinical treatment of age-related cardiovascular diseases.
DOI: 10.6084/m9.figshare.19130729.v2
title: European patent data for text analytics

description: The data combines European patent data with the OECD-REGPAT and OECD Patent Quality Indicators databases by using the publication number.
DOI: 10.6084/m9.figshare.25824124.v1
title: Data for "Responses of El Niño and La Niña precipitation to CO<sub>2</sub> removal"

description: The El Niño-Southern Oscillation (ENSO)-induced tropical Pacific rainfall anomaly is central to ENSO dynamics and has broad socio-economic and ecosystem relevance through ocean-atmosphere teleconnections, but its response to climate change mitigation remains less explored. Using large ensemble simulations of an idealized CO<sub>2</sub> removal pathway, we found pronounced hysteresis and asymmetric features of equatorial Pacific rainfall changes between two ENSO phases. El Niño rainfall inherits its intensification and eastward shift changes under global warming throughout the CO<sub>2</sub> removal phase, showing strong hysteresis on a century scale. This is primarily due to the hysteretic southward shift of the background Intertropical Convergence Zone in the eastern Pacific, whose low-level cross-equatorial winds enhance near-equatorial surface convergence and high cloudiness, facilitating El Niño deep convection through cloud-longwave radiation feedback. In contrast, El Niño rainfall reduction in the shallow convection-dominated central Pacific is driven by the eastward shift of El Niño-induced sea surface temperature (SST) anomalies and associated boundary layer divergences. The intensification of La Niña precipitation, mainly contributed by increased background moisture and shallow convective precipitation anomalies related to the SST anomaly structure, is confined to the central western Pacific, with a hysteresis timescale of a few decades following the thermal inertia of the upper ocean. The distinct regimes and resilience of El Niño and La Niña precipitation climate change, shaped by their respective mean state forcers, can provide a reference for climate change mitigation, and shed light on ENSO characteristic changes in past and future climate.
DOI: 10.6084/m9.figshare.13109540.v1
title: Supplementary Material for: Obesity Prevalence in the Long-Term Future in 18 European Countries and in the USA

description: <b><i>Introduction:</i></b> Obesity constitutes a major public health problem in Europe, but how the obesity epidemic in European countries will evolve remains unknown. Most previous obesity projections considered the short-term future only, focused on single non-European countries, and projected ongoing increases foremost. We comparatively project obesity prevalence into the long-term future for 18 European countries and the USA. <b><i>Data:</i></b> We used national age-specific (20–84 years) and sex-specific obesity prevalence estimates (1975–2016) from the NCD Risk Factor Collaboration (NCD-RisC) 2017 study, which are based on available measured height and weight data, supplemented with estimates from a Bayesian hierarchical model. <b><i>Methods:</i></b> We projected age- and sex-specific obesity prevalence up to the year 2100 by integrating the notion of a wave-shaped obesity epidemic into conventional age-period projections. <b><i>Results:</i></b> In 1990–2016, the increasing trends in obesity prevalence were decelerating. Obesity is expected to reach maximum levels between 2030 and 2052 among men, and between 2026 and 2054 among women. The maximum levels will likely be reached first in The Netherlands, USA, and UK, and last in Switzerland; and are expected to be highest in the USA and UK, and lowest in The Netherlands for men and Denmark for women. In 2060, obesity prevalence is expected to be lowest among Dutch men and highest among Swiss men. The projected age-specific obesity prevalence levels have an inverse U-shape, peaking at around the age of 60–69 years. <b><i>Discussion:</i></b> Applying our novel approach to the NCD-RisC 2017 data, obesity prevalence is expected to reach maximum levels between 2026 and 2054, with the USA and UK reaching the highest maximum levels first, followed by other European countries.
DOI: 10.6084/m9.figshare.4981748.v1
title: Working for Biochar

description: Calculations for Economic analysis of biochar production from date palm fronds.
DOI: 10.6084/m9.figshare.6244058.v1
title: Accuracy of TcCO2 monitoring meta-analysis

description: This is the data and R code for analyses undertaken in a systematic review and meta-analysis of the agreement between transcutaneous and arterial measurements of CO2.
DOI: 10.25452/figshare.plus.24255795.v1
title: Running Injury Clinic Kinematic Dataset

description: OverviewBiomechanics dataset of human subjects (N=1798) walking and or running on a treadmill. Data include 3D marker positions over trials ranging from 25-60 seconds. Also included are demographic information and calculated variables of interest (step with, stride rate, peak knee flexion angle, etc...), sample processing code, and data analysis tutorials.<br>Data DescriptionContained within this dataset are 4 categories of files. They consist of datafiles (.JSON format -&gt;2506 files), metadata (.CSV format -&gt;2 files), Matlab processing code (.M, .MAT format -&gt; 8 files) and Matlab tutorial files (.M, .MLX, .MAT format -&gt; 8 files). All code which accompanies this dataset (processing and tutorials) can be found in the "supplementary_materials.zip" file.Data files are contained within the zipped folder "ric_data" which itself a contains series of folders with names representing the subject ID. Each subject ID folder contains timestamped datafile(s) in ".json" format with each containing walking and/or running data from a single collection session.<br>MethodsThree-dimensional (3D) marker trajectory data were captured using either a 3-camera or an 8-camera VICON motion capture system (Bonita or MX3+, Vicon Motion Systems Oxford, UK) while participants walked or ran on a treadmill. Spherical retro-reflective markers were placed on anatomical landmarks and rigid plates with clusters of 3-4 markers were placed on each of seven lower body segments as per Pohl et al. (Gait Posture. 2010;32(4):559-563.). The marker-set consisted of seven rigid segments and followed International Society of Biomechanics standards. To allow for unobstructed movement during running, anatomical markers were removed following a one second static trial where subjects stood upon a template with their feet positioned straight ahead and 0.3m apart with arms crossed over their chest. Following a warmup period of 2-5mins, kinematic data were collected for approximately 60 seconds while participants walked and then ran at a self-selected speed.Data were collected at the University of Calgary Running Injury Clinic as part of research studies or as part of clinical practice between 2009 and 2017. All subjects provided informed consent and all data were collected under approval from the University of Calgary's Conjoint Health Research Ethics Board (CHREB) (Ethics IDs: E–21705, E–22194, E–24339).<br>More detailsMore details regarding this dataset can be found in the README file. This file contains more detailed descriptions of the contents of the datafiles, processing code, and tutorial code.<br>LicensingThe data is protected under a CC BY 4.0 license. All scripts and functions are protected under a permissive MIT license which can be found in the file LICENSE.txt.
DOI: 10.6084/m9.figshare.27854667.v1
title: <b>Grief and Death Anxiety in Patients with Panic Disorder: A Cross-Sectional Observational Study in a Mediterranean Context</b>

description: This study addresses an understudied topic, exploring the interplay between panic disorder, grief, and death anxiety in a culturally rich population. Our findings offer valuable insights into the psychological vulnerabilities of individuals with panic disorder, emphasizing the moderating effects of demographic and relational factors. We believe this research aligns with your journal’s scope, contributing to a deeper understanding of stress and coping mechanisms.
DOI: 10.6084/m9.figshare.1430096.v1
title: Maraviroc intensification of cART in patients with suboptimal immunological recovery: a 48-week, placebo-controlled randomized trial

description: File: CD4 and CD8 subsets. This SPSS file contains the absolute number of CD4 and CD8 T cell subsets, as well as the percentage of CD31+ in CD4 naive T cells, at various time points during the MIRS trial. Please see the 'variable view' of the SPSS file and the 'methods' section of the paper for more information. We have used SAS software for our analyses.
DOI: 10.6084/m9.figshare.24494578.v1
title: Nicotiana Benthamiana KLAB Genome assembly and annotation

description: Nicotiana Benthamiana KLAB Genome assembly and annotation
DOI: 10.6084/m9.figshare.24831567.v5
title: M2CVD

description: Code and dataM2CVD:Multi-Model Collaboration for Code Vulnerability Detection
DOI: 10.6084/m9.figshare.26792983.v1
title: p17 peptide simulation data. Dataset includes imaged trajectory files for the five Pep-GaMD simulations runs. We have also provided the topology and the pdb file.

description: Insights into the structural dynamic mechanism of PC1 activation by TA peptide agonists p9, p17 and p21 to provide an in-depth understanding that will facilitate development of therapeutics targeting PC1 for ADPKD by targeting PC1treatment.
DOI: 10.6084/m9.figshare.11894742.v1
title: A comparison of the inquiline and prey species of Nepenthes rafflesiana pitchers in contiguous and fragmented habitat patches in Singapore

description: Data associated with the article:Lam WN, Yeo H, Lim RJY, Wong SH, Lam-Phua SG, Fashing NJ, Neo L, Wang WY, Cheong LF, Ng PYC & Tan HTW. (2020).A comparison of the inquiline and prey species of Nepenthes rafflesiana pitchers in contiguous and fragmented habitat patches in Singapore. Raffles Bulletin of Zoology.
DOI: 10.6084/m9.figshare.7532777.v1
title: Fig. 4 All pairwise outcomes

description: All pairwise outcomes, including starting fraction, ending fraction, and colonies counted on last day
DOI: 10.6084/m9.figshare.24548590.v1
title: Local variation in plant community with slope aspect as a tool for forest restoration in Malagasy tropical montane forest

description: To address the loss in forest cover and biodiversity in tropical regions, human intervention in forest restoration is vital to help the forests get back the structure and diversity they have lost. Therefore, stakeholders involved in forest restoration activities require comprehensive information about the structure and composition of original forests in the region to make informed decisions regarding the selection of appropriate species and plant communities to reproduce. The objective of this study is to characterize the forest structure and identify the contribution of terrain topography to the distribution of plant communities in a tropical humid montane forest in the central region of Madagascar. Species composition and tree basal area across 30 plots were measured, and similarities between plots were analyzed. The analysis identified two different communities. The statistical tests demonstrated significant segregation between the two groups along the south-north axis but it was not significant along the west-east axis. The first community, referred to as the “north-slope community <i>NC</i>”, dominated the north-facing slopes, and the second community, hereafter “south-slope community <i>SC</i>” dominated the east, south and west-facing slopes. Species and functional diversity of <i>SC</i> were higher, but the community-weighted wood density was lower than <i>NC</i>. To facilitate future forest restoration efforts in the region, the study recommends replicating <i>NC</i> on slopes with aspects ranging from 288° to 63° (in the clockwise direction) and <i>SC</i> on other slopes. This study underscores the influence of terrain topography and slope aspects on ecosystem and species diversity in tropical montane forests.