cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.12754/data-2025-0001
title: Physico-chemical data gathered in a biomonitoring project in the Warnow Estuary and the Baltic Sea coast with high spatio-temporal resolution (OTC-Genomics)

description: Estuaries and coasts are characterized by ecological dynamics that bridge the boundary between habitats, such as fresh and marine water bodies or the open sea and the land. Because of this, these ecosystems harbor ecosystem functions that shaped human history. At the same time, they display distinct dynamics on large and small temporal and spatial scales, impeding their study. Within the framework of the OTC-Genomics project, we compiled a data set describing the community composition as well as abiotic state of an estuary and the coastal region close to it with unprecedented spatio-temporal resolution. We sampled fifteen locations in a weekly to twice weekly rhythm for a year across the Warnow river estuary and the Baltic Sea coast. From those samples, we measured temperature  (TEMP7IDD, °C), salinity (PSAL7IDD), and the concentrations of Chlorophyll a (CPHT2F2D, mg/m<sup>3</sup>), phosphate (PHOS7DXD, mmol/m<sup>3</sup>), ammonium (AMON7DXD, mmol/m<sup>3</sup>), nitrate (NTRA7DXD, mmol/m<sup>3</sup>), and nitrite (NTRI7DXD, mmol/m<sup>3</sup>).
DOI: 10.6084/m9.figshare.29755565.v3
title: Data for Genome Report of Cladosporium oxysporum A3.I.1.docx

description: <b>These data contain additional information about the genome assembly and annotation process of </b><b><i>Cladosporium oxysporum</i></b><b> A3.I.1, an isolate capable of degrading polyurethane</b>
DOI: 10.6084/m9.figshare.29897750
title: OTU Abundance Data: Oral Microbiome in Hypertensive Patients with/without Periodontitis

description: This upload contains processed OTU data, Taxonomic Annotation Table and Sample Metadata supporting the manuscript : “A Comparative Analysis of Oral Microbial Communities in Hypertensive Patients with and without Chronic Periodontitis”Keywords reflect core concepts: disease conditions (hypertension, periodontitis), sample type (salivary microbiota), analytical method (16S rRNA sequencing), and main finding (microbial imbalance).
DOI: 10.6084/m9.figshare.29897750.v1
title: OTU Abundance Data: Oral Microbiome in Hypertensive Patients with/without Periodontitis

description: This upload contains processed OTU data, Taxonomic Annotation Table and Sample Metadata supporting the manuscript : “A Comparative Analysis of Oral Microbial Communities in Hypertensive Patients with and without Chronic Periodontitis”Keywords reflect core concepts: disease conditions (hypertension, periodontitis), sample type (salivary microbiota), analytical method (16S rRNA sequencing), and main finding (microbial imbalance).
DOI: 10.5281/zenodo.17752786
title: Emerging hotspots of agricultural drought under climate change (data)
DOI: 10.5281/zenodo.17752785
title: Emerging hotspots of agricultural drought under climate change (data)
DOI: 10.5683/sp3/6t3z6j
title: Une fille qui court: une aventure sportive offerte aux femmes du Québec pour favoriser et découvrir les bienfaits du mouvement dans leurs différentes sphères de vie
title: "Une fille qui court": a sporting adventure offered to women in Quebec to promote and discover the benefits of movement in their different spheres of life

description: Deux défis sportifs non compétitifs consistent en la réalisation d’épreuves de course à pied exclusivement réservées aux femmes à priori sédentaires. Malgré la grande popularité et les multiples bénéfices connus associés à une participation des événements sportifs, peu d’études, par surcroit québécoises, ont mesuré les effets à court, moyen et long terme de la participation des femmes. L’objectif principal est d’évaluer les variables physiques, psychologiques et sociales liées aux deux défis sportifs « Une fille qui court » et « Expérience Pyrénées ». L’étude sera réalisée à l’aide d’un devis mixte longitudinal à mesures répétées comportant cinq phases et faisant appel à des questionnaires électroniques (n=2 000) et des entrevues individuelles avec la partenaire et les coureuses dans les Pyrénées (n=18). Pour la partenaire, les résultats permettront de dépasser les observations réalisées sur le terrain et de vérifier de façon empirique l’atteinte de l’objectif visé par la présente étude.
//
Two non-competitive sporting challenges consist of running events exclusively reserved for women who are presumably sedentary. Despite the great popularity and the multiple known benefits associated with participation in sporting events, few studies, especially those from Quebec, have measured the short, medium and long-term effects of women's participation. The main objective is to evaluate the physical, psychological and social variables related to the two sporting challenges "Une fille qui court" and "Expérience Pyrénées". The study will be conducted using a longitudinal mixed design with repeated measures comprising five phases and using electronic questionnaires (n=2,000) and individual interviews with the partner and the runners in the Pyrenees (n=18). For the partner, the results will go beyond the observations made in the field and empirically verify the achievement of the objective of this study.
DOI: 10.6084/m9.figshare.30740003
title: Supplementary Material for: Predictive Factors for Infectious Complications After Robotic Gastrectomy for Gastric or Esophagogastric Junction Cancer

description: Introduction: Robotic gastrectomy offers perioperative advantages such as reduced blood loss and faster recovery; however, infectious complications remain a significant concern. In this study, we aimed to identify the predictive factors for postoperative infectious complications following radical robotic gastrectomy in patients with gastric or esophagogastric junctional cancer.
Methods: This retrospective single-center study analysed data from 155 patients with gastric or esophagogastric junction cancer who underwent curative robotic gastrectomy between December 2017 and April 2025 to identify predictive factors for postoperative infectious complications. Twenty-two variables, including nutritional indices and surgical factors, were evaluated.
Results: A total of 18 patients developed Clavien–Dindo grade II–IIIa infectious complications. Infectious complications included pneumonia (n=5, 3.2%), intra-abdominal abscess (n=5, 3.2%), anastomotic leakage (n=3, 1.9%), cholecystitis (n=2, 1.2%), nonocclusive mesenteric ischemia (n=1, 0.6%), bile leakage (n=1, 0.6%), and sepsis (n=1, 0.6%). The number of patients with complications and American Society of Anesthesiologists Physical Status (ASA-PS) class ≥3 (p=0.006) and preoperative smoking (p=0.012) was higher than that among patients without complications. Although hemoglobin levels (p=0.041) and lymphocyte-to-monocyte ratios (LMR, p=0.017) were lower in patients with complications, the platelet-to-lymphocyte ratios (p=0.034) were higher. Multivariate analysis revealed that current smoking (odds ratio, 3.21; 95% confidence interval, 1.24–18.21) and ASA-PS class of ≥3 (odds ratio, 3.8; 95% confidence interval, 1.18–7.52) were identified as predictors of infectious complications.
Conclusion: Robotic gastrectomy offers technical advantages, but optimizing patient-specific risk is essential for the best outcomes. Preoperative smoking and a high ASA-PS class were independent predictors of infectious complications following robotic gastrectomy. Enhanced perioperative management targeting these risk factors may reduce postoperative morbidity.
DOI: 10.6084/m9.figshare.30740003.v1
title: Supplementary Material for: Predictive Factors for Infectious Complications After Robotic Gastrectomy for Gastric or Esophagogastric Junction Cancer

description: Introduction: Robotic gastrectomy offers perioperative advantages such as reduced blood loss and faster recovery; however, infectious complications remain a significant concern. In this study, we aimed to identify the predictive factors for postoperative infectious complications following radical robotic gastrectomy in patients with gastric or esophagogastric junctional cancer.
Methods: This retrospective single-center study analysed data from 155 patients with gastric or esophagogastric junction cancer who underwent curative robotic gastrectomy between December 2017 and April 2025 to identify predictive factors for postoperative infectious complications. Twenty-two variables, including nutritional indices and surgical factors, were evaluated.
Results: A total of 18 patients developed Clavien–Dindo grade II–IIIa infectious complications. Infectious complications included pneumonia (n=5, 3.2%), intra-abdominal abscess (n=5, 3.2%), anastomotic leakage (n=3, 1.9%), cholecystitis (n=2, 1.2%), nonocclusive mesenteric ischemia (n=1, 0.6%), bile leakage (n=1, 0.6%), and sepsis (n=1, 0.6%). The number of patients with complications and American Society of Anesthesiologists Physical Status (ASA-PS) class ≥3 (p=0.006) and preoperative smoking (p=0.012) was higher than that among patients without complications. Although hemoglobin levels (p=0.041) and lymphocyte-to-monocyte ratios (LMR, p=0.017) were lower in patients with complications, the platelet-to-lymphocyte ratios (p=0.034) were higher. Multivariate analysis revealed that current smoking (odds ratio, 3.21; 95% confidence interval, 1.24–18.21) and ASA-PS class of ≥3 (odds ratio, 3.8; 95% confidence interval, 1.18–7.52) were identified as predictors of infectious complications.
Conclusion: Robotic gastrectomy offers technical advantages, but optimizing patient-specific risk is essential for the best outcomes. Preoperative smoking and a high ASA-PS class were independent predictors of infectious complications following robotic gastrectomy. Enhanced perioperative management targeting these risk factors may reduce postoperative morbidity.
DOI: 10.6084/m9.figshare.30740006
title: Supplementary Material for: Exploring an alternative pre-operative sentinel lymph node mapping method using a Magnetic tracer and MRI for melanoma patients – SCARLETT study protocol

description: Background: Sentinel lymph node biopsy (SLNB) is important in the management of malignant melanoma and is currently performed by pre-operatively injecting a colloid nanomaterial labeled with Technetium (99mTc). Intra-operatively, Patent Blue (PB) is injected to improve the visualization of the lymphatic tract. However, this technique is associated with disadvantages such as radiation exposure and logistic challenges due to short half-live time of 99mTc. Superparamagnetic iron-oxide (SPIO) is a non-radioactive alternative using a magnetic tracer (Magtrace® (Endomagnetics Ltd.)). Several studies showed that SPIO is non-inferior to 99mTc and PB in breast cancer patients. SPIO is expected to be non-inferior in melanoma patients as well. This study aims to evaluate the non-inferiority of pre-operative MRI scanning using SPIO compared to lymphoscintigraphy (LS) and SPECT/CT using 99mTc for identifying SLN status in melanoma patients. Additionally, the non-inferiority of SPIO/magnetometer (Sentimag®, Endomagnetics Ltd.) in comparison with gold standard (99mTc) will be evaluated for SLN procedures in melanoma patients.

Methods: A prospective single-arm non-inferiority study is being performed at the department of surgical oncology at the Zuyderland Medical Center Sittard, the Netherlands. One-hundred-and-forty adult patients with primary melanoma stage I-II with an indication for wide local excision (1 cm) and SLNB will be included. All patients will undergo lymphatic mapping with Magtrace® and 99mTc. The MRI protocol proved to be feasible in the previously conducted pilot study. The MRI protocol will be implemented if it proves to be non-inferior with a margin of 5%. ClinicalTrials.gov number: NCT05145829.

Discussion: Elimination of radiation exposure is beneficial for both patients and healthcare personnel. Moreover, logistic challenges will be eliminated as SPIO can be injected several days before surgery, immediately followed by MRI scanning. Scheduled surgeries will not be jeopardized by pre-operative logistics and procedures. It will increase both hospital-oriented productivity, patient-friendliness and comfort as surgical delays are avoided.
DOI: 10.6084/m9.figshare.30740006.v1
title: Supplementary Material for: Exploring an alternative pre-operative sentinel lymph node mapping method using a Magnetic tracer and MRI for melanoma patients – SCARLETT study protocol

description: Background: Sentinel lymph node biopsy (SLNB) is important in the management of malignant melanoma and is currently performed by pre-operatively injecting a colloid nanomaterial labeled with Technetium (99mTc). Intra-operatively, Patent Blue (PB) is injected to improve the visualization of the lymphatic tract. However, this technique is associated with disadvantages such as radiation exposure and logistic challenges due to short half-live time of 99mTc. Superparamagnetic iron-oxide (SPIO) is a non-radioactive alternative using a magnetic tracer (Magtrace® (Endomagnetics Ltd.)). Several studies showed that SPIO is non-inferior to 99mTc and PB in breast cancer patients. SPIO is expected to be non-inferior in melanoma patients as well. This study aims to evaluate the non-inferiority of pre-operative MRI scanning using SPIO compared to lymphoscintigraphy (LS) and SPECT/CT using 99mTc for identifying SLN status in melanoma patients. Additionally, the non-inferiority of SPIO/magnetometer (Sentimag®, Endomagnetics Ltd.) in comparison with gold standard (99mTc) will be evaluated for SLN procedures in melanoma patients.

Methods: A prospective single-arm non-inferiority study is being performed at the department of surgical oncology at the Zuyderland Medical Center Sittard, the Netherlands. One-hundred-and-forty adult patients with primary melanoma stage I-II with an indication for wide local excision (1 cm) and SLNB will be included. All patients will undergo lymphatic mapping with Magtrace® and 99mTc. The MRI protocol proved to be feasible in the previously conducted pilot study. The MRI protocol will be implemented if it proves to be non-inferior with a margin of 5%. ClinicalTrials.gov number: NCT05145829.

Discussion: Elimination of radiation exposure is beneficial for both patients and healthcare personnel. Moreover, logistic challenges will be eliminated as SPIO can be injected several days before surgery, immediately followed by MRI scanning. Scheduled surgeries will not be jeopardized by pre-operative logistics and procedures. It will increase both hospital-oriented productivity, patient-friendliness and comfort as surgical delays are avoided.
DOI: 10.12754/data-2024-0024
title: Dataset for the publication by Nadezhda Iakovchuk, Jenny Fabian, Olaf Dellwig, Christiane Hassenrück, Heide N. Schulz-Vogt with the topic of "physiological traits of <i>Beggiatoa</i> sp. 35Flor strain under overplus phosphate conditions and its applications to the marine coastal ecosystems"

description: Lab experiment was performed with <i>Beggiatoa</i> sp. 35Flor strain under defined conditions. Bacteria were cultivated under phosphate limited conditions until stationary phase (6<sup>th</sup> day after inoculation) with subsequent transfer to a new media to get 5<sup>th</sup> generations of starved culture. 6 days old 5<sup>th</sup> generation P starved cultures were supplemented with 100 µL of 0.5 mmol L<sup>-1</sup> KH<sub>2</sub>PO<sub>4</sub> dissolved in artificial seawater and sampled for total P, protein content, total dissolved P, dissolved inorganic phosphate and filaments for microscopy. Throughout the incubation period, samples were collected immediately (within first 10 min) after adding P-supplement, after 30 min, 2 h, and 24 h of incubation with phosphate. The entire experiment was repeated 5 times.
description: Cultivation experiments, laboratory measurements (see ReadMe file for more info)
description: 2 datasets: Survival of different generations (survival) and environmental data for incubation experiment (envir_data_Beggiatoa_polyP)
description: Size, Survival: 61 rows (including 1 row for header), 5 columns
envir_data_Beggiatoa_polyP: 36 rows (including 1 row for header), 12 columns
DOI: 10.15468/dl.3u87ds
title: Occurrence Download

description: A dataset containing 199700 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is Culicidae"
 ]
}

 The dataset includes 199700 records from 650 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014361-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aa7w6e
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-99.64761 22.00162,-99.64759 22.00123,-99.64753 22.00084,-99.64744 22.00046,-99.64731 22.00009,-99.64714 21.99973,-99.64694 21.99938,-99.64671 21.99905,-99.64645 21.99875,-99.64616 21.99846,-99.64585 21.9982,-99.64551 21.99796,-99.64515 21.99775,-99.64478 21.99758,-99.64439 21.99743,-99.64398 21.99731,-99.64357 21.99723,-99.64315 21.99718,-99.64273 21.99717,-99.6423 21.99719,-99.64189 21.99725,-99.64147 21.99733,-99.64107 21.99746,-99.64068 21.99761,-99.64031 21.99779,-99.63996 21.99801,-99.63962 21.99825,-99.63931 21.99851,-99.63903 21.99881,-99.63878 21.99912,-99.63855 21.99945,-99.63836 21.9998,-99.6382 22.00016,-99.63808 22.00054,-99.63799 22.00092,-99.63794 22.00131,-99.63793 22.0017,-99.63795 22.00209,-99.63801 22.00248,-99.6381 22.00286,-99.63823 22.00324,-99.6384 22.0036,-99.6386 22.00394,-99.63883 22.00427,-99.63909 22.00458,-99.63938 22.00487,-99.63969 22.00513,-99.64003 22.00536,-99.64039 22.00557,-99.64076 22.00575,-99.64115 22.0059,-99.64156 22.00601,-99.64197 22.00609,-99.64239 22.00614,-99.64281 22.00615,-99.64324 22.00613,-99.64365 22.00608,-99.64407 22.00599,-99.64447 22.00587,-99.64486 22.00571,-99.64523 22.00553,-99.64558 22.00532,-99.64592 22.00507,-99.64623 22.00481,-99.64651 22.00452,-99.64676 22.0042,-99.64699 22.00387,-99.64718 22.00352,-99.64734 22.00316,-99.64746 22.00278,-99.64755 22.0024,-99.6476 22.00201,-99.64761 22.00162))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1000-2025"
 ]
}

 The dataset includes 19 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014383-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fa5v9
title: Occurrence Download

description: A dataset containing 121297 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhodymeniales"
 ]
}

 The dataset includes 121297 records from 641 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014363-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.12754/data-2024-0021
title: MARNET Arkona Basin
title: Temperature 2022-2023

description: Temperature Data from MARNET station Arkona Basin
description: Moored SBE37-Microcat, 10-minute time resolution
description: 43m and 45m(bottom) water depth, time range 1.1.2022 – 31.12.2023
DOI: 10.15468/dl.jcrfja
title: Occurrence Download

description: A dataset containing 59933 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Turdus migratorius",
 "Year is 2025"
 ]
}

 The dataset includes 59933 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014380-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.12754/data-2024-0020
title: Hydrographic data (CTD, PCTD, MSS, VMADCP) of RV SONNE during cruise 296/2 in the Golfo Almirante Montt (Chile)

description: Hydrographic data were recorded with various instruments (SBE CTD 911+, SST - MSS90 profiler, RDI VMADCP-OS75, thermosalinograph) data during RV SONNE cruise SO296/2, which took place in the Golfo Almirante Montt (Chile) between February 3rd and 8th 2023. The aim of the investigations of the project MAPUCHE was to gain a comprehensive understanding of recent and past biogeochemical processes in the fjord by combining biogeochemical, oceanographic, and paleo-oceanographic investigations. The oceanographic investigations were performed to gather information about the stratification, dynamics and mixing of water masses in the semi-enclosed fjord system.
The data are provided as a collection of files for the particular instruments. CTD and MSS data are given as vertical profiles. Surface temperatures and salinity as well as meteorological data are provided as time series of 30 minutes averages. ADCP current and backscatter data are formatted as two-dimensional grid files.
description: CTD profiles; Microstructure Profiles (MSS); Current meter profiles; Time series of sea surface and meteorological data
description: SO296_ADCP_GAM_transectC_current.dat; SO296_ADCP_Station_GAM21_target_strength.dat; SO296_GAM_surface_TS_wind_data_30min.dat; SO296_MSS_GAM_transectC.dat; SO296_MSS_Station_GAM21-end.dat; SO296_MSS_Station_GAM21-start.dat
description: ADCP currents; ADCP target strength; Surface Temperature, salinity and meteorology data; Hydrographic transect data from MSS; Hydrographic profile data from MSS
DOI: 10.15468/dl.9v52nj
title: Occurrence Download

description: A dataset containing 29230217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abies, Aesculus, Alnus, Amelanchier, Ampelopsis, Andromeda, Betula, Boehmeria, Brasenia, Buxus, Calluna, Calocedrus, Carpinus, Carya, Castanea, Cedrela, Cedrus, Celtis, Cephalotaxus, Cercidiphyllum, Cercis, Chamaecyparis, Chamaedaphne, Collinsonia, Comptonia, Corylopsis, Corylus, Cotinus, Cotoneaster, Crataegus, Cryptomeria, Cunninghamia, Cyclocarya, Cyrilla, Decodon, Diervilla, Dulichium, Elaeagnus, Empetrum, Epimedium, Eucommia, Eurya, Fagus, Fatsia, Ficus, Fraxinus, Gaylussacia, Ginkgo, Gleditsia, Glyptostrobus, Halesia, Hedera, Hibiscus, Ilex, Itea, Juglans, Leucothoe, Liquidambar, Liriodendron, Loranthus, Magnolia, Mahonia, Malus, Meliosma, Morus, Myrica, Nelumbo, Nyssa, Ostrya, Pachysandra, Paliurus, Parrotia, Parrotiopsis, Paulownia, Philadelphus, Physocarpus, Picea, Pinus, Pistacia, Platycarya, Populus, Proserpinaca, Pseudolarix, Pseudotsuga, Pterocarya, Pteroceltis, Pyracantha, Pyrus, Quercus, Rhamnus, Rhododendron, Rhus, Sambucus, Sassafras, Saururus, Sequoia, Smilax, Sorbus, Spiraea, Stewartia, Styrax, Symphoricarpos, Symplocos, Taxodium, Taxus, Tilia, Toona, Torreya, Trema, Trichosanthes, Tsuga, Ulmus, Urtica, Viscum, Vitis, Weigela, Zanthoxylon, Zelkova)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "CoordinateUncertaintyInMeters is less than or equal to 10000",
 "DistanceFromCentroidInMeters is greater than or equal to 2000",
 "OccurrenceStatus is one of (Present)",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 29230217 records from 4930 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014374-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.