cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14091295
title: Additional file 4 of Prion protein oligomers cause neuronal cytoskeletal damage in rapidly progressive Alzheimer’s disease

description: Additional file 4. The spreadsheet gives the average peptide counts and SEM of the cytoskeletal and cytoskeletal-associated proteins from the HDF pools from frontal cortex lysates of control brains and those other neurodegenerative samples described in the study. It also contains the results of the post-hoc intergroup analyses of these peptide counts.
DOI: 10.6084/m9.figshare.14091310
title: Additional file 7 of Prion protein oligomers cause neuronal cytoskeletal damage in rapidly progressive Alzheimer’s disease

description: Additional file 7. The additional file contains spreadsheets with averaged normalized mass spectrometric data after removal of candidates found in beads only controls (unique peptide counts), for the interactors of high-density prion protein oligomers in cerebral cortices from controls and neurodegenerative cases included in the study.
DOI: 10.6084/m9.figshare.14091298
title: Additional file 5 of Prion protein oligomers cause neuronal cytoskeletal damage in rapidly progressive Alzheimer’s disease

description: Additional file 5. The spreadsheet contains the raw global proteomics data (SWATH-MS values) of Con, spAD, rpAD, DLB, rDLB, DFTL, and SVD. Subsequent normalized data along with the results of pairwise statistical testing (Welch’s t-test).
DOI: 10.6084/m9.figshare.14091304
title: Additional file 6 of Prion protein oligomers cause neuronal cytoskeletal damage in rapidly progressive Alzheimer’s disease

description: Additional file 6. The spreadsheet contains the raw proteomics data (unique peptide counts data) of HDFs, and subsequent normalized data along with the results of pairwise statistical testing (Welch’s t-test).
DOI: 10.6084/m9.figshare.14091304.v1
title: Additional file 6 of Prion protein oligomers cause neuronal cytoskeletal damage in rapidly progressive Alzheimer’s disease

description: Additional file 6. The spreadsheet contains the raw proteomics data (unique peptide counts data) of HDFs, and subsequent normalized data along with the results of pairwise statistical testing (Welch’s t-test).
DOI: 10.6084/m9.figshare.14091310.v1
title: Additional file 7 of Prion protein oligomers cause neuronal cytoskeletal damage in rapidly progressive Alzheimer’s disease

description: Additional file 7. The additional file contains spreadsheets with averaged normalized mass spectrometric data after removal of candidates found in beads only controls (unique peptide counts), for the interactors of high-density prion protein oligomers in cerebral cortices from controls and neurodegenerative cases included in the study.
DOI: 10.6084/m9.figshare.14091298.v1
title: Additional file 5 of Prion protein oligomers cause neuronal cytoskeletal damage in rapidly progressive Alzheimer’s disease

description: Additional file 5. The spreadsheet contains the raw global proteomics data (SWATH-MS values) of Con, spAD, rpAD, DLB, rDLB, DFTL, and SVD. Subsequent normalized data along with the results of pairwise statistical testing (Welch’s t-test).
DOI: 10.6084/m9.figshare.14091295.v1
title: Additional file 4 of Prion protein oligomers cause neuronal cytoskeletal damage in rapidly progressive Alzheimer’s disease

description: Additional file 4. The spreadsheet gives the average peptide counts and SEM of the cytoskeletal and cytoskeletal-associated proteins from the HDF pools from frontal cortex lysates of control brains and those other neurodegenerative samples described in the study. It also contains the results of the post-hoc intergroup analyses of these peptide counts.
DOI: 10.6084/m9.figshare.14490089.v1
title: Additional file 2 of Genome of the destructive oomycete Phytophthora cinnamomi provides insights into its pathogenicity and adaptive potential

description: Additional file 2: Supplementary Table 1. Genome assembly statistics of GKB4 and other currently available genome sequences for Phytophthora cinnamomi. Table S2. RxLR effectors identified in the current version of P. cinnamomi genome following the method of McGowin and Fitzpatrick (2017). Table S3. Crinkler effectors identified in the current version of P. cinnamomi genome. Table S4. NLPs identified in the current version of P. cinnamomi genome. Table S5. CAZymes identified from the current version of P. cinnamomi genome. Table S6. Summary of RNA-Seq data generated in this study. Table S7. List of differentially expressed genes between mycelia and in planta infection as identified from DESeq2.
DOI: 10.6084/m9.figshare.14490089
title: Additional file 2 of Genome of the destructive oomycete Phytophthora cinnamomi provides insights into its pathogenicity and adaptive potential

description: Additional file 2: Supplementary Table 1. Genome assembly statistics of GKB4 and other currently available genome sequences for Phytophthora cinnamomi. Table S2. RxLR effectors identified in the current version of P. cinnamomi genome following the method of McGowin and Fitzpatrick (2017). Table S3. Crinkler effectors identified in the current version of P. cinnamomi genome. Table S4. NLPs identified in the current version of P. cinnamomi genome. Table S5. CAZymes identified from the current version of P. cinnamomi genome. Table S6. Summary of RNA-Seq data generated in this study. Table S7. List of differentially expressed genes between mycelia and in planta infection as identified from DESeq2.
DOI: 10.6084/m9.figshare.14490283
title: Additional file 11 of Genetic diversity structure of western-type carrots

description: Additional file 11: Table S10. Characteristics of the 78 carrot cultivars used in the study.
DOI: 10.6084/m9.figshare.14490283.v1
title: Additional file 11 of Genetic diversity structure of western-type carrots

description: Additional file 11: Table S10. Characteristics of the 78 carrot cultivars used in the study.
DOI: 10.6084/m9.figshare.14490286
title: Additional file 12 of Genetic diversity structure of western-type carrots

description: Additional file 12: Table S11. Description of 93 DcS-ILP markers used for genotyping the collection of 78 OP carrot cultivars.
DOI: 10.6084/m9.figshare.14490289
title: Additional file 13 of Genetic diversity structure of western-type carrots

description: Additional file 13: Table S12. The codominant DcS-ILP marker matrix obtained for the collection of 390 carrot plants.
DOI: 10.6084/m9.figshare.14490280
title: Additional file 10 of Genetic diversity structure of western-type carrots

description: Additional file 10: Table S9. Results of DAPC grouping carried out on SNP genotyping data.
DOI: 10.6084/m9.figshare.14490292
title: Additional file 14 of Genetic diversity structure of western-type carrots

description: Additional file 14: Table S13. The codominant SNP marker matrix obtained for the collection of 390 carrot plants.
DOI: 10.6084/m9.figshare.14490292.v1
title: Additional file 14 of Genetic diversity structure of western-type carrots

description: Additional file 14: Table S13. The codominant SNP marker matrix obtained for the collection of 390 carrot plants.
DOI: 10.6084/m9.figshare.14490280.v1
title: Additional file 10 of Genetic diversity structure of western-type carrots

description: Additional file 10: Table S9. Results of DAPC grouping carried out on SNP genotyping data.
DOI: 10.6084/m9.figshare.14490286.v1
title: Additional file 12 of Genetic diversity structure of western-type carrots

description: Additional file 12: Table S11. Description of 93 DcS-ILP markers used for genotyping the collection of 78 OP carrot cultivars.
DOI: 10.6084/m9.figshare.14490298
title: Additional file 2 of Genetic diversity structure of western-type carrots

description: Additional file 2: Table S1. DcS-ILP panel summary statistics for the analysed collection of carrot cultivars.
DOI: 10.6084/m9.figshare.14490289.v1
title: Additional file 13 of Genetic diversity structure of western-type carrots

description: Additional file 13: Table S12. The codominant DcS-ILP marker matrix obtained for the collection of 390 carrot plants.
DOI: 10.6084/m9.figshare.14490298.v1
title: Additional file 2 of Genetic diversity structure of western-type carrots

description: Additional file 2: Table S1. DcS-ILP panel summary statistics for the analysed collection of carrot cultivars.
DOI: 10.6084/m9.figshare.14490301
title: Additional file 3 of Genetic diversity structure of western-type carrots

description: Additional file 3: Table S2. SNP panel summary statistics for the analysed collection of carrot cultivars.
DOI: 10.6084/m9.figshare.14490301.v1
title: Additional file 3 of Genetic diversity structure of western-type carrots

description: Additional file 3: Table S2. SNP panel summary statistics for the analysed collection of carrot cultivars.
DOI: 10.6084/m9.figshare.14490304
title: Additional file 4 of Genetic diversity structure of western-type carrots

description: Additional file 4: Table S3. Comparison of the percentage of polymorphic loci observed within analysed cultivars.
DOI: 10.6084/m9.figshare.14490304.v1
title: Additional file 4 of Genetic diversity structure of western-type carrots

description: Additional file 4: Table S3. Comparison of the percentage of polymorphic loci observed within analysed cultivars.
DOI: 10.6084/m9.figshare.14490307
title: Additional file 5 of Genetic diversity structure of western-type carrots

description: Additional file 5: Table S4. Mean HO and HE estimates and pairwise FST values obtained for the predefined market classes.
DOI: 10.6084/m9.figshare.14490307.v1
title: Additional file 5 of Genetic diversity structure of western-type carrots

description: Additional file 5: Table S4. Mean HO and HE estimates and pairwise FST values obtained for the predefined market classes.
DOI: 10.6084/m9.figshare.14490310
title: Additional file 6 of Genetic diversity structure of western-type carrots

description: Additional file 6: Table S5. Pairwise cultivar estimates of FST based on 93 DcS-ILP markers.
DOI: 10.6084/m9.figshare.14490310.v1
title: Additional file 6 of Genetic diversity structure of western-type carrots

description: Additional file 6: Table S5. Pairwise cultivar estimates of FST based on 93 DcS-ILP markers.
DOI: 10.6084/m9.figshare.14490313
title: Additional file 7 of Genetic diversity structure of western-type carrots

description: Additional file 7: Table S6. Pairwise cultivar estimates of FST based on 2354 SNP markers.
DOI: 10.6084/m9.figshare.14490313.v1
title: Additional file 7 of Genetic diversity structure of western-type carrots

description: Additional file 7: Table S6. Pairwise cultivar estimates of FST based on 2354 SNP markers.
DOI: 10.6084/m9.figshare.14490316.v1
title: Additional file 8 of Genetic diversity structure of western-type carrots

description: Additional file 8: Table S7. Estimation of the optimum number of clusters based on Evanno’s ∆K method.
DOI: 10.6084/m9.figshare.14490319
title: Additional file 9 of Genetic diversity structure of western-type carrots

description: Additional file 9: Table S8. Results of DAPC grouping carried out on DcS-ILP genotyping data.
DOI: 10.6084/m9.figshare.14490316
title: Additional file 8 of Genetic diversity structure of western-type carrots

description: Additional file 8: Table S7. Estimation of the optimum number of clusters based on Evanno’s ∆K method.
DOI: 10.6084/m9.figshare.14490319.v1
title: Additional file 9 of Genetic diversity structure of western-type carrots

description: Additional file 9: Table S8. Results of DAPC grouping carried out on DcS-ILP genotyping data.
DOI: 10.6084/m9.figshare.14490353
title: Additional file 1 of A genome-wide scan of copy number variants in three Iranian indigenous river buffaloes

description: Additional file 1: Supplementary Table S1 List of CNVs identified for each Iranian river buffalo breed.
DOI: 10.6084/m9.figshare.14490353.v1
title: Additional file 1 of A genome-wide scan of copy number variants in three Iranian indigenous river buffaloes

description: Additional file 1: Supplementary Table S1 List of CNVs identified for each Iranian river buffalo breed.
DOI: 10.6084/m9.figshare.14490356.v1
title: Additional file 2 of A genome-wide scan of copy number variants in three Iranian indigenous river buffaloes

description: Additional file 2: Supplementary Table S2 List of all CNVRs identified for each Iranian river buffalo breed.
DOI: 10.6084/m9.figshare.14490359
title: Additional file 3 of A genome-wide scan of copy number variants in three Iranian indigenous river buffaloes

description: Additional file 3: Supplementary Table S3 List of 203 non redundant CNVRs. Samples count for each breed, genes and QTL are also reported.
DOI: 10.6084/m9.figshare.14490362
title: Additional file 4 of A genome-wide scan of copy number variants in three Iranian indigenous river buffaloes

description: Additional file 4: Supplementary Table S4 Gene annotation according to DAVID Database.
DOI: 10.6084/m9.figshare.14490356
title: Additional file 2 of A genome-wide scan of copy number variants in three Iranian indigenous river buffaloes

description: Additional file 2: Supplementary Table S2 List of all CNVRs identified for each Iranian river buffalo breed.
DOI: 10.6084/m9.figshare.14490362.v1
title: Additional file 4 of A genome-wide scan of copy number variants in three Iranian indigenous river buffaloes

description: Additional file 4: Supplementary Table S4 Gene annotation according to DAVID Database.
DOI: 10.6084/m9.figshare.14490359.v1
title: Additional file 3 of A genome-wide scan of copy number variants in three Iranian indigenous river buffaloes

description: Additional file 3: Supplementary Table S3 List of 203 non redundant CNVRs. Samples count for each breed, genes and QTL are also reported.
DOI: 10.6084/m9.figshare.14490380
title: Additional file 1 of From informed consent to adherence: factors influencing involvement in mass drug administration with ivermectin for malaria elimination in The Gambia

description: Additional file 1: Table S1. Demographic, social, and implementation factors associated with consent and enrollment, coverage, and adherence in the MDA trial based on surveyed respondents.
DOI: 10.6084/m9.figshare.14490380.v1
title: Additional file 1 of From informed consent to adherence: factors influencing involvement in mass drug administration with ivermectin for malaria elimination in The Gambia

description: Additional file 1: Table S1. Demographic, social, and implementation factors associated with consent and enrollment, coverage, and adherence in the MDA trial based on surveyed respondents.
DOI: 10.6084/m9.figshare.14490406
title: Additional file 1 of Overweight in Swedish show dogs–prevalence and association with performance in competition

description: Additional file 1. Raw data (breed, sex, age, BCS and performance in competition) for the 120 dogs included in the study cohort.
DOI: 10.6084/m9.figshare.14490406.v1
title: Additional file 1 of Overweight in Swedish show dogs–prevalence and association with performance in competition

description: Additional file 1. Raw data (breed, sex, age, BCS and performance in competition) for the 120 dogs included in the study cohort.
DOI: 10.6084/m9.figshare.14490424
title: Additional file 1 of Study protocol: evaluation of sheds for life (SFL): a community-based men’s health initiative designed “for shedders by shedders” in Irish Men’s sheds using a hybrid effectiveness-implementation design

description: Additional file 1.
DOI: 10.6084/m9.figshare.14490424.v1
title: Additional file 1 of Study protocol: evaluation of sheds for life (SFL): a community-based men’s health initiative designed “for shedders by shedders” in Irish Men’s sheds using a hybrid effectiveness-implementation design

description: Additional file 1.
DOI: 10.6084/m9.figshare.14490430.v1
title: Additional file 1 of High prevalence of vitamin D deficiency among normotensive and hypertensive pregnant women in Ghana

description: Additional file 1.
DOI: 10.6084/m9.figshare.14490430
title: Additional file 1 of High prevalence of vitamin D deficiency among normotensive and hypertensive pregnant women in Ghana

description: Additional file 1.
DOI: 10.6084/m9.figshare.14490437.v1
title: Additional file 5 of An enhanced approach to simulation-based mastery learning: optimising the educational impact of a novel, National Postgraduate Medical Boot Camp

description: Additional file 5. Dataset.
DOI: 10.6084/m9.figshare.14490437
title: Additional file 5 of An enhanced approach to simulation-based mastery learning: optimising the educational impact of a novel, National Postgraduate Medical Boot Camp

description: Additional file 5. Dataset.
DOI: 10.6084/m9.figshare.14490467
title: Additional file 1 of Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment

description: Additional file 1. SnRK peptides used for the blast, SnRK genes in Arabidopsis, rice and barley, and 1500 bp upstream nucleic acids sequences of HvSnRKs.
DOI: 10.6084/m9.figshare.14490470
title: Additional file 2 of Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment

description: Additional file 2. Promoter predictions of HvSnRKs.
DOI: 10.6084/m9.figshare.14490473.v1
title: Additional file 3 of Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment

description: Additional file 3. Synteny analysis between Arabidopsis/rice and barley.
DOI: 10.6084/m9.figshare.14490467.v1
title: Additional file 1 of Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment

description: Additional file 1. SnRK peptides used for the blast, SnRK genes in Arabidopsis, rice and barley, and 1500 bp upstream nucleic acids sequences of HvSnRKs.
DOI: 10.6084/m9.figshare.14490470.v1
title: Additional file 2 of Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment

description: Additional file 2. Promoter predictions of HvSnRKs.
DOI: 10.6084/m9.figshare.14490476
title: Additional file 4 of Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment

description: Additional file 4. Up/down-regulated HvSnRKs genes response to ABA treatment.
DOI: 10.6084/m9.figshare.14490476.v1
title: Additional file 4 of Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment

description: Additional file 4. Up/down-regulated HvSnRKs genes response to ABA treatment.
DOI: 10.6084/m9.figshare.14490473
title: Additional file 3 of Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment

description: Additional file 3. Synteny analysis between Arabidopsis/rice and barley.
DOI: 10.6084/m9.figshare.14490493
title: Additional file 2 of O-GlcNAcylation protein disruption by Thiamet G promotes changes on the GBM U87-MG cells secretome molecular signature

description: Additional file 2. List of proteins identified with UniPotID.
DOI: 10.6084/m9.figshare.14490493.v1
title: Additional file 2 of O-GlcNAcylation protein disruption by Thiamet G promotes changes on the GBM U87-MG cells secretome molecular signature

description: Additional file 2. List of proteins identified with UniPotID.
DOI: 10.6084/m9.figshare.14490512
title: Additional file 1 of Positive natural selection in primate genes of the type I interferon response

description: Additional file 1. Summary of genes analysed in this study with evolutionary model information.
DOI: 10.6084/m9.figshare.14490512.v1
title: Additional file 1 of Positive natural selection in primate genes of the type I interferon response

description: Additional file 1. Summary of genes analysed in this study with evolutionary model information.
DOI: 10.6084/m9.figshare.14490581
title: Additional file 1 of Neutral theory: applicability and neutrality of using generic health-related quality of life tools in diseases or conditions where specific tools are available

description: Additional file 1. Details of all included and excluded tools.
DOI: 10.6084/m9.figshare.14490581.v1
title: Additional file 1 of Neutral theory: applicability and neutrality of using generic health-related quality of life tools in diseases or conditions where specific tools are available

description: Additional file 1. Details of all included and excluded tools.
DOI: 10.6084/m9.figshare.14490592.v1
title: Additional file 10 of Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

description: Additional file 10: Table S1: Small RNA sequencing data processing statistics for all 28 serum samples from blood donor sequenced in house (GSE155370; ).
DOI: 10.6084/m9.figshare.14490595.v1
title: Additional file 11 of Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

description: Additional file 11: Table S2: Small RNA sequencing data processing statistics for all 16 plasma samples from NAFLD patients from a public dataset (GSE114923).
DOI: 10.6084/m9.figshare.14490595
title: Additional file 11 of Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

description: Additional file 11: Table S2: Small RNA sequencing data processing statistics for all 16 plasma samples from NAFLD patients from a public dataset (GSE114923).
DOI: 10.6084/m9.figshare.14490592
title: Additional file 10 of Paired-end small RNA sequencing reveals a possible overestimation in the isomiR sequence repertoire previously reported from conventional single read data analysis

description: Additional file 10: Table S1: Small RNA sequencing data processing statistics for all 28 serum samples from blood donor sequenced in house (GSE155370; ).
DOI: 10.6084/m9.figshare.14490644
title: Additional file 4 of Functional morphology of immature mating in a widow spider

description: Additional file 4: Dataset S1. Data generated and analysed during the current study.
DOI: 10.6084/m9.figshare.14490644.v1
title: Additional file 4 of Functional morphology of immature mating in a widow spider

description: Additional file 4: Dataset S1. Data generated and analysed during the current study.
DOI: 10.6084/m9.figshare.14490656
title: Additional file 1 of Identification of key methylation differentially expressed genes in posterior fossa ependymoma based on epigenomic and transcriptome analysis

description: Additional file 1: Table S1. The list of DEGs between the two EPN-PF subtypes
DOI: 10.6084/m9.figshare.14490656.v1
title: Additional file 1 of Identification of key methylation differentially expressed genes in posterior fossa ependymoma based on epigenomic and transcriptome analysis

description: Additional file 1: Table S1. The list of DEGs between the two EPN-PF subtypes
DOI: 10.6084/m9.figshare.14490659.v1
title: Additional file 2 of Identification of key methylation differentially expressed genes in posterior fossa ependymoma based on epigenomic and transcriptome analysis

description: Additional file 2: Table S2.The list of DMGs between the two EPN-PF subtypes
DOI: 10.6084/m9.figshare.14490662
title: Additional file 3 of Identification of key methylation differentially expressed genes in posterior fossa ependymoma based on epigenomic and transcriptome analysis

description: Additional file 3: Table S3. The list of methylated-related highly expressed genes