cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.895349
title: MSM36 raw data of EM122 multibeam echosounder (bathymetry, beam time series & water column data) for the Alboran Sea

description: Multibeam echosounder (MBES) data recorded during RV MARIA S. MERIAN cruise MSM36 between 18.02.2014 and 17.03.2014 at the Moroccan continental margins. The cruise carried out multidisciplinary research on the long-term development of cold-water coral ecosystems in selected areas along the Moroccan continental margins in the Mediterranean Sea and in the Atlantic Ocean. The key instrument to be used during this expedition was the Bremen Deep Sea Drill Rig MeBo. CI Citation: Paul Wintersteller (seafloor-imaging@marum.de) as responsible party for bathymetry raw data ingest and approval. Description of data source: During the RV MARIA S. MERIAN cruise MSM36, the Kongsberg EM122 multibeam echosounder with a nominal sounding frequency of 12 kHz was utilized. 288 beams with an acoustical footprint of 2°(TX)/2°(RX) are formed for each ping. For further information consult https://www.km.kongsberg.com/. During the cruise the swath width was set to 120° and the survey speed was kept at around 8 knots. The use of the high-density equidistant and the dual-swath mode of the EM122 resulted in up to 864 soundings per ping. Both MBES devices (EM1002 and EM122) were used for the seabed mapping in the Mediterranean Sea. Though, the acquisition computer of the EM122 failed west of Melilla but could be repaired before entering the Atlantic region. The rest of the time the system was stable. In the Gulf of Cádiz, the seabed mapping was only conducted with the EM122 as the water depth was too deep for the EM1002. Two different subsets of hydroacoustic data were acquired during this cruise: A western Mediterranean Sea dataset covering the EMCP (East Melilla Cold-Water Coral Province) and the WMCP (West Melilla Cold-Water Coral Province) in the Alboran Sea and an Atlantic dataset covering the MACP (Moroccan Atlantic Cold-Water Coral Province) in the Gulf of Cádiz. Responsible person during this cruise / PI: Stefanie Gaide (sgaide@marum.de). Chief Scientist: D. Hebbeln CR: https://www.tib.eu/de/suchen/id/awi%3Adoi~10.2312%252Fcr_msm36/ CSR: http://www.bsh.de/aktdat/dod/fahrtergebnis/2014/20140066.htm A special thanks goes to the watch keeper during MSM36: J.P. Henriet, N. Stange
DOI: 10.1594/pangaea.895374
title: MSM36 raw data of EM1002 multibeam echosounder (bathymetry & beam time series) for the Alboran Sea

description: Multibeam echosounder (MBES) data recorded during RV MARIA S. MERIAN cruise MSM36 between 18.02.2014 and 17.03.2014 at the Moroccan continental margins. The cruise carried out multidisciplinary research on the long-term development of cold-water coral ecosystems in selected areas along the Moroccan continental margins in the Mediterranean Sea and in the Atlantic Ocean. The key instrument to be used during this expedition was the Bremen Deep Sea Drill Rig MeBo. CI Citation: Paul Wintersteller (seafloor-imaging@marum.de) as responsible party for bathymetry raw data ingest and approval. Description of data source: During the RV MARIA S. MERIAN cruise MSM36 the moon pooled Kongsberg EM1002 shallow multibeam echosounder was utilized. The EM1002 uses a nominal sounding frequency of 95 kHz. 111 beams with an acoustical footprint of 2°(Tx)/2°(Rx) are formed for each ping. For further information consult http://www.tdi-bi.com/downloads/EM1002_Product_specification.pdf. During the cruise the swath width was set to 120° and the survey speed was kept at around 8 knots. Both MBES devices (EM1002 and EM122) were used for the seabed mapping in the Mediterranean Sea. In the Gulf of Cádiz, the seabed mapping was only conducted with the EM122 as the water depth was too deep for the EM1002. In general, the EM1002 delivered reliable data, problems during the acquisition only occurred during bad weather conditions. Two different subsets of hydroacoustic data were acquired during this cruise: A western Mediterranean Sea dataset covering the EMCP (East Melilla Cold-Water Coral Province) and the WMCP (West Melilla Cold-Water Coral Province) in the Alboran Sea and an Atlantic dataset covering the MACP (Moroccan Atlantic Cold-Water Coral Province) in the Gulf of Cádiz. Responsible person during this cruise / PI: Stefanie Gaide (s.gaide@uni-bremen.de). Chief Scientist: D. Hebbeln CR: https://www.tib.eu/de/suchen/id/awi%3Adoi~10.2312%252Fcr_msm36/ CSR: http://www.bsh.de/aktdat/dod/fahrtergebnis/2014/20140066.htm A special thanks goes to the watch keeper during MSM36: J.P. Henriet, N. Stange
DOI: 10.1594/pangaea.895580
title: Continuous thermosalinograph oceanography along POLARSTERN cruise track PS112 (ANT-XXXIII/3)
DOI: 10.1594/pangaea.895640
title: Processed multinet CTD data from METEOR cruise M148/2

description: Research expedition M148-2 took place from July 2nd, 2018 (Walvis Bay, Namibia) to July 20th, 2018 (Las Palmas, Spain). CTD data for 7 stations with a total of 14 individual casts along the cruise track were recorded using a Sea & Sun Technology CTD90M (SN 979) down to depths of 500m. The CTD was equipped with the following sensors: Temperature sensor Pt100 model 1509 (Thermal Developments International), Conductivity sensor 7-pole platinum coated electrode cell in quartz glass (Sea & Sun Technology), Seapoint Chlorophyll Fluorometer (Seapoint) and dissolved oxygen sensor (DO522M18, Clark type, OxyGuard). The data files contain the data for temperature, salinity, density, chlorophyll a concentration and oxygen concentration; as raw data and processed and flagged according to the recommendations for real-time data processing of EuroGOOS and GTSPP, as well as the outlier detection method CoTeDe (https://github.com/castelao/CoTeDe). Biogeographic regions are determined according to Spalding et al. (2012). TEOS-10 unit conversions have been performed with the GSW Oceanographic Toolbox (McDougall and Barker, 2011).
DOI: 10.1594/pangaea.895641
title: MSM57/2 raw data of EM122 multibeam echosounder (bathymetry, beam time series & water column data)

description: Multibeam echosounder (MBES) data recorded during RV MARIA S. MERIAN cruise MSM57/2 between 13.08.2016 and 07.09.2016 at Svalbard. The cruise investigated gas hydrate systems and their dynamics at the continental margin of Svalbard. The key instrument to be used during this expedition was the Bremen Deep Sea Drill Rig MeBo. Drilling during Leg 2 was concentrated mostly at the uppermost part of the continental slope offshore Prins Karls Forland. CI Citation: Paul Wintersteller (seafloor-imaging@marum.de) as responsible party for bathymetry raw data ingest and approval. Description of data source: During the RV MARIA S. MERIAN cruise MSM57/2, the hull-mounted Kongsberg EM122 multibeam echosounder with a nominal sounding frequency of 12 kHz was utilized. 288 beams with an acoustical footprint of 2°(Tx)/2°(Rx) are formed for each ping. For further information consult https://www.km.kongsberg.com/. During this cruise the swath width was set to 120° to improve data quality, reduce the amount of noisy data at the outer beams and increase the ping rate. The use of the high-density equidistant and the dual-swath mode of the EM122 resulted in up to 864 soundings per ping. The EM122 was running continuously during the cruise with an average vessel speed of about 4.4 kn. Responsible person during this cruise / PI: C. dos Santos Ferreira (cferreira@marum.de). Chief Scientist: G. Bohrmann (gbohrmann@marum.de) CR: http://elib.suub.uni-bremen.de/edocs/00105895-1.pdf CSR: https://www2.bsh.de/aktdat/dod/fahrtergebnis/2016/20160045.htmA special thanks goes to the watchkeeper during MSM57/2: Nikolas Stange, Michael Riedel
DOI: 10.1594/pangaea.895807
title: Physical oceanography during VALDIVIA cruise VA22

description: Hydrographic observations in the Nordic Seas during Valdivia cruise 22 from 15. June - 25. July 1984.
DOI: 10.1594/pangaea.896014
title: Metal and nutrient concentrations and grain size distribution in sediments following crushed nodule substrate deposition for eleven days during SONNE cruise SO242/2
DOI: 10.5281/zenodo.12561119
title: Dataset: Old National Bancorp (ONBPP) Stock Performance

description: This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
DOI: 10.5281/zenodo.12561120
title: Dataset: Old National Bancorp (ONBPP) Stock Performance

description: This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
DOI: 10.1594/pangaea.896026
title: Copper concentrations in nematoda following crushed nodule substrate deposition for eleven days during SONNE cruise SO242/2
DOI: 10.1594/pangaea.895465
title: IRD record of sediment core JM07-015
DOI: 10.1594/pangaea.896102
title: Documentation of sediment core PS115/1_11-1

description: Date/Time is given in UTC. Certainty of identification: definite if observer clearly identified the species. The number of individuals is binned according to the options given in the data acquisition software: 1, 2, 3, less equal 5, less equal 10, greater than 10, greater than 20. More precise values may exist, due to observer comments.
DOI: 10.15156/bio/sh1382957.10fu
title: SH1382957.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.6u89ky
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_2_GID","value":"BRA.12.129_2","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005810-260108223611665/datasets/export for details.
DOI: 10.15156/bio/sh1382958.10fu
title: SH1382958.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1382960.10fu
title: SH1382960.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1382961.10fu
title: SH1382961.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1382966.10fu
title: SH1382966.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1382967.10fu
title: SH1382967.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.18668988
title: Videomicroscopy of the Article "Combating resilient Acanthamoeba castellanii cysts: Ultrasonic frequency-dependent effects on viability and excystment"

description: 2.3. Videomicroscopy



2.3.1. Imaging for low-frequency ultrasound treatment

After low-frequency ultrasound treatment, A. castellanii cysts were seeded into a µ-slide 8-well plate (ibidi®) at a density of 2.5 × 104 cells per well. These were cultured in PYG medium at room temperature. Images were captured using an Andor Revolution XD imaging system, featuring a CSUX1 Yokogawa spinning disk unit and an Andor Ixon + 897 back-illuminated EMCCD camera (16 µm2 pixel size). This system was mounted on an Olympus inverted IX81S1F-ZDC microscope equipped with a 40x objective lens (NA 0.95). IQ3 acquisition software (Andor Technology) was used to acquire approximately 1,800 images, each 512x512 pixels, over a 16-hr period.




2.3.2. Imaging for high-frequency ultrasound treatment

For cells exposed to high-frequency ultrasound, 50 µL of the post-treatment cell suspension was added to a µ-slide 8-well plate (ibidi®) and supplemented with 250 µL of PYG medium. Cells were then incubated at room temperature for 48 h. Images were subsequently acquired every three minutes for 16 h using a Nikon CrestOptics X-Light V3 Spinning Disk Confocal microscope with a 40× objective lens. Nikon Imaging Software was used to capture 2720 × 2720 pixel images.
DOI: 10.5281/zenodo.18668987
title: Videomicroscopy of the Article "Combating resilient Acanthamoeba castellanii cysts: Ultrasonic frequency-dependent effects on viability and excystment"

description: 2.3. Videomicroscopy



2.3.1. Imaging for low-frequency ultrasound treatment

After low-frequency ultrasound treatment, A. castellanii cysts were seeded into a µ-slide 8-well plate (ibidi®) at a density of 2.5 × 104 cells per well. These were cultured in PYG medium at room temperature. Images were captured using an Andor Revolution XD imaging system, featuring a CSUX1 Yokogawa spinning disk unit and an Andor Ixon + 897 back-illuminated EMCCD camera (16 µm2 pixel size). This system was mounted on an Olympus inverted IX81S1F-ZDC microscope equipped with a 40x objective lens (NA 0.95). IQ3 acquisition software (Andor Technology) was used to acquire approximately 1,800 images, each 512x512 pixels, over a 16-hr period.




2.3.2. Imaging for high-frequency ultrasound treatment

For cells exposed to high-frequency ultrasound, 50 µL of the post-treatment cell suspension was added to a µ-slide 8-well plate (ibidi®) and supplemented with 250 µL of PYG medium. Cells were then incubated at room temperature for 48 h. Images were subsequently acquired every three minutes for 16 h using a Nikon CrestOptics X-Light V3 Spinning Disk Confocal microscope with a 40× objective lens. Nikon Imaging Software was used to capture 2720 × 2720 pixel images.
DOI: 10.25625/2d2wfo/sfqh5o
title: localresidual.hh

description: :unav
DOI: 10.25625/2d2wfo/ede0ja
title: mg.hh

description: :unav
DOI: 10.15468/dl.57a9ak
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ponerorchis exilis (Ames & Schltr.) S.C.Chen, P.J.Cribb & S.W.Gale"
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093029-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25625/2d2wfo/n48lfu
title: Comsol_Bent_100bar_40C_05ml.txt

description: :unav
DOI: 10.25625/2d2wfo/r8ugtc
title: h2.hh

description: :unav
DOI: 10.25625/2d2wfo/ccj8e8
title: CMakeLists.txt

description: :unav
DOI: 10.15468/dl.ynhwtu
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006071-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25625/2d2wfo/bhwf6k
title: h2o_ch4.hh

description: :unav
DOI: 10.25625/2d2wfo/t4udsv
title: h2o_co2.hh

description: :unav
DOI: 10.25625/2d2wfo/vtbjtm
title: d2_he.hh

description: :unav
DOI: 10.25625/2d2wfo/l0znib
title: h2o_so4.hh

description: :unav
DOI: 10.25625/2d2wfo/kfmqco
title: ch4_c2h6.hh

description: :unav
DOI: 10.25625/2d2wfo/qrihe7
title: n2_d2.hh

description: :unav
DOI: 10.25625/2d2wfo/e5blrb
title: ch4_n2.hh

description: :unav
DOI: 10.25625/2d2wfo/yi3nde
title: benchmark_hyuspre_fluidsystem.hh

description: :unav
DOI: 10.25625/2d2wfo/t5wd3l
title: P22.tab

description: :unav
DOI: 10.25625/2d2wfo/5dgqsk
title: c3plus_d2.hh

description: :unav
DOI: 10.25625/2d2wfo/4oitmf
title: pre-applypatch.sample

description: :unav
DOI: 10.25625/2d2wfo/cxqpwe
title: c2h6.hh

description: :unav
DOI: 10.25625/2d2wfo/qpar0w
title: Pliocene_88bar_45C_0.5ml.txt

description: :unav
DOI: 10.25625/2d2wfo/6zi4xr
title: CMakeLists.txt

description: :unav
DOI: 10.25625/2d2wfo/ecxyou
title: h2s_c2h6.hh

description: :unav
DOI: 10.15468/dl.tw2ten
title: Occurrence Download

description: A dataset containing 134490263 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arthropoda"
 ]
}

 The dataset includes 134490263 records from 14185 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096838-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15522495
title: disfluentES_v1
DOI: 10.5281/zenodo.15522496
title: disfluentES_v1
DOI: 10.15468/dl.pmyw6v
title: Occurrence Download

description: A dataset containing 4090 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Amphiprion clarkii (Bennett, 1830))"
 ]
}

 The dataset includes 4090 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002498-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.