cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/syk7q-ev143
title: Desulfobacter_sulfur

description: sulfur enrichment
description: <strong>Tilt Series Date:</strong> 2015-05-16</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Desulfobacter</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Victoria Orphan</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-16-6/rawdata/</p>Vic_40002.mrc,  Tilt Series (Pixel Size 0.33 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-16-6/rawdata/Vic_40002.mrc"
        > <i class="download icon"></i> Download </a></p>

        Vic_40002_full.rec,  Reconstruction (Pixel Size 1.32 nm), 801.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-16-6/3dimage_56579/Vic_40002_full.rec"
        > <i class="download icon"></i> Download </a></p>

        etl2015-05-16-6_slicer16408.png,  irregular shaped REZ .  (possible extremely faint flow-lines .  blue and green arrows) .  -andrew, 910.6 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/etl2015-05-16-6_slicer16408.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/2sk3h-62122
title: Chromogranin A-GFP

description: INS-1E Pancreatic Beta Cells expressing Chromogranin A-GFP
description: <strong>Tilt Series Date:</strong> 2015-12-10</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> INS-1E Pancreatic Cells expressing Chromogranin A GFP</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Zach Freyberg</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-12-10-11/3dimage_71310/</p>tomography19.rec,  Reconstruction (Pixel Size 24.0 nm), 2.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-12-10-11/3dimage_71310/tomography19.rec"
        > <i class="download icon"></i> Download </a></p>

        tomography19.mrc,  Tilt Series (Pixel Size 6.0 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-12-10-11/rawdata/tomography19.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography19new_full.rec,  Reconstruction (Pixel Size 0.0 nm), 1.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-12-10-11/3dimage_118642/tomography19new_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.3m42zj
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rapana venosa",
 "Country is Italy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 68 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033133-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/b52s6-dac48
title: Crosslinked HIV-1 cores TRIM5α

description: Hyperstable purified HIV-1 cores crosslinked with TRIM5α
description: <strong>Tilt Series Date:</strong> 2015-01-03</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> HIV cores</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 109.0 eV/Å²,  defocus: -5.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> SIRT</p>
<strong>Collaborators and Roles:</strong> Wes Sundquist</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grids frozen in Utah</p>
<strong>Sample Preparation:</strong> Non infectious HIV-1 cores decorated with TRIM5α. 0.3 µM sulfo-EGS</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-01-03-28/3dimage_73516/</p>tomography0029_full.rec,  Reconstruction (Pixel Size 0.0 nm), 355.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-01-03-28/3dimage_73516/tomography0029_full.rec"
        > <i class="download icon"></i> Download </a></p>

        tomography0029.sirt.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-01-03-28/3dimage_73515/tomography0029.sirt.rec"
        > <i class="download icon"></i> Download </a></p>

        tomography0029.mrc,  Tilt Series (Pixel Size 0.26 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2015-01-03-28/rawdata/tomography0029.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rbpkt-n8705
title: Ecoli Minicell with Pul-T2SS

description: Grid box YWC239
description: <strong>Tilt Series Date:</strong> 2017-02-06</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 140.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Olivera Francetic</p>
  ycw2017-02-06-18_slicer17752.jpg: Flagellar motor?
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-02-06-18/rawdata/</p>20170206_YWC239_10019.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-02-06-18/rawdata/20170206_YWC239_10019.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170206_YWC239_10019_part121_54.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-02-06-18/3dimage_82087/20170206_YWC239_10019_part121_54.rec"
        > <i class="download icon"></i> Download </a></p>

        20170206_YWC239_10019_part121_53.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-02-06-18/3dimage_82102/20170206_YWC239_10019_part121_53.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/12t5j-fzt46
title: Conjugation_Ecoli

description: These are conjugation in Ecoli samples. The cells are the ANB35 cells (donor) and ANB24  .  cells (recipient), More information on these strains can be found in the paper (Direct .  visualization of horizontal gene transfer). These are tomograms from (square 3) in Grid 1 .  from box 4 (See William's notes for more information).  There are cryoLM data for this grid .  obtained during the Linkam stage demo.
description: <strong>Tilt Series Date:</strong> 2019-06-23</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> ANB35, Hfr3000 mrfp1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> The samples were sent by Ariel B Lindner (who is the second author on the above-mentioned . paper) in Paris.</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-34/rawdata/</p>SquThreeTS4.mrc,  Tilt Series (Pixel Size 0.449 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-34/rawdata/SquThreeTS4.mrc"
        > <i class="download icon"></i> Download </a></p>

        SquThreeTS4_full.rec,  Reconstruction (Pixel Size 1.796 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-34/3dimage_104179/SquThreeTS4_full.rec"
        > <i class="download icon"></i> Download </a></p>

        SquThreeTS4.mrc.mdoc,  32.2 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-34/rawdata/SquThreeTS4.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.88mvek
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fraxinus potosina"
 ]
}

 The dataset includes 57 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033134-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/849w1-73x98
title: Conjugation_Ecoli

description: These are conjugation in Ecoli samples. The cells are the ANB35 cells (donor) and ANB24  .  cells (recipient), More information on these strains can be found in the paper (Direct .  visualization of horizontal gene transfer). These are tomograms from (square 6) in Grid 1 .  from box 4 (See William's notes for more information).  There are cryoLM data for this grid .  obtained during the Linkam stage demo.
description: <strong>Tilt Series Date:</strong> 2019-06-23</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> ANB35, Hfr3000 mrfp1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> The samples were sent by Ariel B Lindner (who is the second author on the above-mentioned . paper) in Paris.. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-42/rawdata/</p>SquSixTS.mrc,  Tilt Series (Pixel Size 0.449 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-42/rawdata/SquSixTS.mrc"
        > <i class="download icon"></i> Download </a></p>

        SquSixTS_full.rec,  Reconstruction (Pixel Size 1.796 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-42/3dimage_104191/SquSixTS_full.rec"
        > <i class="download icon"></i> Download </a></p>

        SquSixTS.mrc.mdoc,  32.3 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-42/rawdata/SquSixTS.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/crmfs-1c817
title: Conjugation_Ecoli

description: These are conjugation samples in Ecoli. The donor strain is ANB35 and the recipient strain is  .  ANB24. More information on these strains can be found in the paper (Direct visualization of .  horizontal gene transfer). These are tomograms from (Square 1) in Grid 1 from box 4 (see .  William's notes for more information).
description: <strong>Tilt Series Date:</strong> 2019-06-23</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> ANB35, Hfr3000 mrfp1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> The samples were sent by Ariel B Lindner (who is the second author on the above-mentioned . paper) in Paris. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-19/rawdata/</p>SquOneTS3_smallcell.mrc,  Tilt Series (Pixel Size 0.449 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-19/rawdata/SquOneTS3_smallcell.mrc"
        > <i class="download icon"></i> Download </a></p>

        SquOneTS3_smallcell_full.rec,  Reconstruction (Pixel Size 1.796 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-19/3dimage_104164/SquOneTS3_smallcell_full.rec"
        > <i class="download icon"></i> Download </a></p>

        SquOneTS3_smallcell.mrc.mdoc,  32.2 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-19/rawdata/SquOneTS3_smallcell.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/qfvj3-6pp05
title: P. gingivalis ABK mutant

description: Triple gingipain ABK mutant in the P. gingivalis W50 strain
description: <strong>Tilt Series Date:</strong> 2018-01-15</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 205.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Sample Preparation:</strong> Harvested and plunge-frozen from liquid culture.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-33/rawdata/</p>Pgin_50.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-33/rawdata/Pgin_50.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pgin_50_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-33/3dimage_91747/Pgin_50_full.rec"
        > <i class="download icon"></i> Download </a></p>

        gca2018-01-15-33_slicer19443.png,  P gingivalis ABK mutant .   .  Another fat/empty tube outside cell, 1.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/gca2018-01-15-33_slicer19443.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1rrzs-ahg47
title: Conjugation_Ecoli

description: These are conjugation in Ecoli samples. The cells are the ANB35 cells (donor) and ANB24  .  cells (recipient), More information on these strains can be found in the paper (Direct .  visualization of horizontal gene transfer). These are tomograms from (square 4) in Grid 1 .  from box 4 (See William's notes for more information).  There are cryoLM data for this grid .  obtained during the Linkam stage demo.
description: <strong>Tilt Series Date:</strong> 2019-06-23</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> ANB35, Hfr3000 mrfp1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> The samples were sent by Ariel B Lindner (who is the second author on the above-mentioned . paper) in Paris.. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-37/rawdata/</p>SquFourTS2.mrc,  Tilt Series (Pixel Size 0.449 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-37/rawdata/SquFourTS2.mrc"
        > <i class="download icon"></i> Download </a></p>

        SquFourTS2_full.rec,  Reconstruction (Pixel Size 1.796 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-37/3dimage_104184/SquFourTS2_full.rec"
        > <i class="download icon"></i> Download </a></p>

        SquFourTS2.mrc.mdoc,  32.2 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-37/rawdata/SquFourTS2.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.e69edj
title: Occurrence Download

description: A dataset containing 16219 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Apis mellifera"
 ]
}

 The dataset includes 16219 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033135-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/br4mw-49j23
title: P. gingivalis ABK mutant

description: Triple gingipain ABK mutant in the P. gingivalis W50 strain
description: <strong>Tilt Series Date:</strong> 2018-01-15</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Sample Preparation:</strong> Harvested and plunge-frozen from liquid culture.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-44/rawdata/</p>Pgin_84.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-44/rawdata/Pgin_84.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pgin_84_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-44/3dimage_91767/Pgin_84_full.rec"
        > <i class="download icon"></i> Download </a></p>

        gca2018-01-15-44_slicer19474.png,  P gingivalis ABK - Large/Empty tube being secreted out?, 1.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/gca2018-01-15-44_slicer19474.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/tw12k-y4241
title: Conjugation_Ecoli

description: These are conjugation samples in Ecoli. The donor strain is ANB35 and the recipient strain is  .  ANB24. More information on these strains can be found in the paper (Direct visualization of .  horizontal gene transfer). These are tomograms from (Square 1) in Grid 1 from box 4 (see .  William's notes for more information).
description: <strong>Tilt Series Date:</strong> 2019-06-23</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> ANB35, Hfr3000 mrfp1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> The samples were sent by Ariel B Lindner (who is the second author on the above-mentioned . paper) in Paris. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-15/rawdata/</p>SquOneTS10.mrc,  Tilt Series (Pixel Size 0.449 nm), 2.3 GB  
        
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        SquOneTS10_full.rec,  Reconstruction (Pixel Size 1.796 nm), 737.3 MB  
        
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        SquOneTS10.mrc.mdoc,  25.9 kB  
        
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