cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14659131
title: Duke Lung Cancer Screening Dataset 2024 - part 3

description: Note - This is part 3 of the dataset.Part 1 can be found at : https://zenodo.org/records/13799069 Part 2 can be found at : https://zenodo.org/records/12784601Part 3 can be found at : https://zenodo.org/records/14659131

Background: Lung cancer risk classification is an increasingly important area of research as low-dose thoracic CT screening programs have become standard of care for patients at high risk for lung cancer. There is limited availability of large, annotated public databases for the training and testing of algorithms for lung nodule classification.

Methods: Screening chest CT scans done between January 1, 2015 and June 30, 2021 at Duke University Health System were considered for this study. Efficient nodule annotation was performed semi-automatically by using a publicly available deep learning nodule detection algorithm trained on the LUNA16 dataset to identify initial candidates, which were then accepted based on nodule location in the radiology text report or manually annotated by a medical student and a fellowship-trained cardiothoracic radiologist.

Results: The dataset contains 1613 CT volumes with 2487 annotated nodules, selected from a total dataset of 2061 patients, with the remaining data reserved for future testing. Radiologist spot-checking confirmed the semi-automated annotation had an accuracy rate of >90%.

Conclusions: The Duke Lung Cancer Screening Dataset 2024 is the first large dataset for CT screening for lung cancer reflecting the use of current CT technology. This represents a useful resource of lung cancer risk classification research, and the efficient annotation methods described for its creation may be used to generate similar databases for research in the future.Dataset part Details:Part 1: DLCS subset 1 to 7 and, metadata and Annotations.Part 2: DLCS subset 8,9 and CT image info metadata.Part 3: DLCS subset 10.

Updates and Versions:



Part 1, Version 1.0 (Published on [03/05/2024]): Released initial dataset, including partial data subsets 1 to 7 and 3D bounding box annotations of the lung nodules.

Part 1, Version 1.1 (Published on [09/19/2024]): Added metadata file (DLCSD24_metadata_v1.1.xlsx) and updated the dataset description and title. 10.5281/zenodo.13799069

Part 2, Version 1.0 (Published on [02/04/2025]): Released DLCS subset 8,9, CT image info metadata (DLCSD24_CT_ImageInfo_v1.csv and metadata documentation).

Part 3, Version 1.0 (Published on [02/04/2025]): Released DLCS subset 10.


Code Repository:To support reproducible open-access research and benchmarking, we have shared several pre-trained models and baseline results in a GitHub and GitLab repository.

GitLab: https://gitlab.oit.duke.edu/cvit-public/ai_lung_health_benchmarkingGitHub: https://github.com/fitushar/AI-in-Lung-Health-Benchmarking-Detection-and-Diagnostic-Models-Across-Multiple-CT-Scan-Datasets

Funding:This work was supported by the Duke Department of Radiology Charles E. Putman Vision Award, NIH/NIBIB P41-EB028744, and NIH/NCI R01-CA261457.
DOI: 10.25549/inscriptifact-ouc110589699
title: Persepolis Fortification Aramaic Text 153, PFAT 153

description: [Text Description:] Administrative text with seals PFATS 0001s; PFATS 0050; PFATS 0189s ❧ [Text or Publication Number Note:] PFAT 153, Bowman 153 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink and incised inscription. Seal impressions PFATS 0001s on upper edge; PFATS 0050 on reverse; PFATS 0189s on bottom edge.
DOI: 10.25549/inscriptifact-ouc110593414
title: Persepolis Fortification Elamite Text 0213, PF 0213

description: [Text Description:] Administrative text with seals PFS 0046; PFS 0076. Aramaic gloss. ❧ [Text or Publication Number Note:] PF 0213 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform, Aramaic ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impressions PFS 0046 on reverse; PFS 0076 on left edge. Aramaic gloss in ink, upper edge (one line), reverse (two lines).
DOI: 10.25549/jrbm-c91-166
title: Kankai ibun, vol. 2, 1807

description: Kankai ibun, [1807], volume 2 = Description and travel of circumnavigation of seas, [1807], volume 2 = 環海 異聞 二 文化 4. Volume two of a manuscript by Gentaku Ōtsuki and Kōkyō Shimura who drew from four Japanese fishermen the story of their voyage around the world during repeated interviews. The Kankai Ibun is an account of their journey when they were sent off-course en route to the capital, Edo. The fishermen were rescued by a Russian ship and taken to late 18th / early 19th century Europe and, most especially, Russia.; The cargo ship, Wakamiyamaru, left from the port of Ishimaki in Sendai-han, today’s Miyagi Prefecture, in Japan carrying rice and lumber with 16 crew members for Edo, today’s Tokyo, on November 27th, 1793. Shipwrecked and drifted in the Pacific Ocean for half a year, they finally landed in one of the islands of the Andreanof Islands, a part of the Aleutian Islands on May 10th, 1794. They were transferred to Irkutsk by Russians where they stayed until the spring of 1803. They were then called in by Alexander I of Russia to St. Petersburg where they stayed from April to June in 1803, and from where they started their journey back home. They were included in the Rezanov mission on the first Russian global circumnavigation by a ship Nadezhda. It took them 16 months to reach the port of Nagasaki, Japan in September, 1804 since they left in June, 1803. Of the sixteen, five crewmen got on board. Four returned home in Sendai; one, who had become an interpreter, returned to Russia with Rezanov.
DOI: 10.15468/dl.qa8uc2
title: Occurrence Download

description: A dataset containing 52526 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hippodamia variegata"
 ]
}

 The dataset includes 52526 records from 699 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027513-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110592038
title: Persepolis Fortification Aramaic Text 267, PFAT 267

description: [Text Description:] Administrative text with seal PFS 0075 ❧ [Text or Publication Number Note:] PFAT 267, Bowman 267 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFS 0075 on obverse, upper edge, reverse, bottom edge, flat edge.
DOI: 10.25549/inscriptifact-ouc110589697
title: Persepolis Fortification Aramaic Text 153, PFAT 153

description: [Text Description:] Administrative text with seals PFATS 0001s; PFATS 0050; PFATS 0189s ❧ [Text or Publication Number Note:] PFAT 153, Bowman 153 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink and incised inscription. Seal impressions PFATS 0001s on upper edge; PFATS 0050 on reverse; PFATS 0189s on bottom edge.
DOI: 10.25549/jrbm-c91-1360
title: Kankai ibun, vol. 3, 1807

description: Kankai ibun, [1807], volume 3 = Description and travel of circumnavigation of seas, [1807], volume 3 = 環海 異聞 三 文化 4. Volume three of a manuscript by Gentaku Ōtsuki and Kōkyō Shimura who drew from four Japanese fishermen the story of their voyage around the world during repeated interviews. The Kankai Ibun is an account of their journey when they were sent off-course en route to the capital, Edo. The fishermen were rescued by a Russian ship and taken to late 18th / early 19th century Europe and, most especially, Russia.; The cargo ship, Wakamiyamaru, left from the port of Ishimaki in Sendai-han, today’s Miyagi Prefecture, in Japan carrying rice and lumber with 16 crew members for Edo, today’s Tokyo, on November 27th, 1793. Shipwrecked and drifted in the Pacific Ocean for half a year, they finally landed in one of the islands of the Andreanof Islands, a part of the Aleutian Islands on May 10th, 1794. They were transferred to Irkutsk by Russians where they stayed until the spring of 1803. They were then called in by Alexander I of Russia to St. Petersburg where they stayed from April to June in 1803, and from where they started their journey back home. They were included in the Rezanov mission on the first Russian global circumnavigation by a ship Nadezhda. It took them 16 months to reach the port of Nagasaki, Japan in September, 1804 since they left in June, 1803. Of the sixteen, five crewmen got on board. Four returned home in Sendai; one, who had become an interpreter, returned to Russia with Rezanov.
DOI: 10.25549/inscriptifact-ouc110592036
title: Persepolis Fortification Aramaic Text 268, PFAT 268

description: [Text Description:] Administrative text with seals PFATS 0026; PFATS 0033 ❧ [Text or Publication Number Note:] PFAT 268, Bowman 268 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impressions PFATS 0026 on reverse; PFATS 0033 on bottom edge. ❧ [Physical Object Note:] Damage on obverse, upper edge, round edge
DOI: 10.25549/inscriptifact-ouc110594581
title: Persepolis Fortification Anepigraphic Tablet 0843.107, PFAnep 0843.107

description: [Text Description:] Administrative text with seals PFUTS 0028; PFUTS 0029; illeg. ❧ [Text or Publication Number Note:] PFAnep 0843.107, PFUT 0843-107 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions PFUTS 0028 on upper edge, reverse, left edge; PFUTS 0029 on bottom edge; illeg. on obverse.
DOI: 10.25549/jrbm-c91-1373
title: Kankai ibun, vol. 3, 1807

description: Kankai ibun, [1807], volume 3 = Description and travel of circumnavigation of seas, [1807], volume 3 = 環海 異聞 三 文化 4. Volume three of a manuscript by Gentaku Ōtsuki and Kōkyō Shimura who drew from four Japanese fishermen the story of their voyage around the world during repeated interviews. The Kankai Ibun is an account of their journey when they were sent off-course en route to the capital, Edo. The fishermen were rescued by a Russian ship and taken to late 18th / early 19th century Europe and, most especially, Russia.; The cargo ship, Wakamiyamaru, left from the port of Ishimaki in Sendai-han, today’s Miyagi Prefecture, in Japan carrying rice and lumber with 16 crew members for Edo, today’s Tokyo, on November 27th, 1793. Shipwrecked and drifted in the Pacific Ocean for half a year, they finally landed in one of the islands of the Andreanof Islands, a part of the Aleutian Islands on May 10th, 1794. They were transferred to Irkutsk by Russians where they stayed until the spring of 1803. They were then called in by Alexander I of Russia to St. Petersburg where they stayed from April to June in 1803, and from where they started their journey back home. They were included in the Rezanov mission on the first Russian global circumnavigation by a ship Nadezhda. It took them 16 months to reach the port of Nagasaki, Japan in September, 1804 since they left in June, 1803. Of the sixteen, five crewmen got on board. Four returned home in Sendai; one, who had become an interpreter, returned to Russia with Rezanov.
DOI: 10.25549/inscriptifact-ouc110592016
title: Persepolis Fortification Aramaic Text 267, PFAT 267

description: [Text Description:] Administrative text with seal PFS 0075 ❧ [Text or Publication Number Note:] PFAT 267, Bowman 267 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFS 0075 on obverse, upper edge, reverse, bottom edge, flat edge.
DOI: 10.25549/inscriptifact-ouc110594561
title: Persepolis Fortification Anepigraphic Tablet 0045.101, PFAnep 0045.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] PFAnep 0045.101, PFUT 0045-101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression on obverse, upper edge, reverse, left edge.
DOI: 10.25549/jrbm-c91-1324
title: Kankai ibun, vol. 3, 1807

description: Kankai ibun, [1807], volume 3 = Description and travel of circumnavigation of seas, [1807], volume 3 = 環海 異聞 三 文化 4. Volume three of a manuscript by Gentaku Ōtsuki and Kōkyō Shimura who drew from four Japanese fishermen the story of their voyage around the world during repeated interviews. The Kankai Ibun is an account of their journey when they were sent off-course en route to the capital, Edo. The fishermen were rescued by a Russian ship and taken to late 18th / early 19th century Europe and, most especially, Russia.; The cargo ship, Wakamiyamaru, left from the port of Ishimaki in Sendai-han, today’s Miyagi Prefecture, in Japan carrying rice and lumber with 16 crew members for Edo, today’s Tokyo, on November 27th, 1793. Shipwrecked and drifted in the Pacific Ocean for half a year, they finally landed in one of the islands of the Andreanof Islands, a part of the Aleutian Islands on May 10th, 1794. They were transferred to Irkutsk by Russians where they stayed until the spring of 1803. They were then called in by Alexander I of Russia to St. Petersburg where they stayed from April to June in 1803, and from where they started their journey back home. They were included in the Rezanov mission on the first Russian global circumnavigation by a ship Nadezhda. It took them 16 months to reach the port of Nagasaki, Japan in September, 1804 since they left in June, 1803. Of the sixteen, five crewmen got on board. Four returned home in Sendai; one, who had become an interpreter, returned to Russia with Rezanov.
DOI: 10.25549/inscriptifact-ouc110592013
title: Persepolis Fortification Aramaic Text 267, PFAT 267

description: [Text Description:] Administrative text with seal PFS 0075 ❧ [Text or Publication Number Note:] PFAT 267, Bowman 267 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFS 0075 on obverse, upper edge, reverse, bottom edge, flat edge.
DOI: 10.25549/inscriptifact-ouc110594560
title: Persepolis Fortification Anepigraphic Tablet 0045.101, PFAnep 0045.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] PFAnep 0045.101, PFUT 0045-101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression on obverse, upper edge, reverse, left edge.
DOI: 10.25549/jrbm-c91-316
title: Kankai ibun, vol. 1, 1807

description: Kankai ibun, [1807], volume 1 = Description and travel of circumnavigation of seas, [1807], volume 1 = 環海 異聞一 文化 4. Volume one of a manuscript by Gentaku Ōtsuki and Kōkyō Shimura who drew from four Japanese fishermen the story of their voyage around the world during repeated interviews. The Kankai Ibun is an account of their journey when they were sent off-course en route to the capital, Edo. The fishermen were rescued by a Russian ship and taken to late 18th / early 19th century Europe and, most especially, Russia.; The cargo ship, Wakamiyamaru, left from the port of Ishimaki in Sendai-han, today’s Miyagi Prefecture, in Japan carrying rice and lumber with 16 crew members for Edo, today’s Tokyo, on November 27th, 1793. Shipwrecked and drifted in the Pacific Ocean for half a year, they finally landed in one of the islands of the Andreanof Islands, a part of the Aleutian Islands on May 10th, 1794. They were transferred to Irkutsk by Russians where they stayed until the spring of 1803. They were then called in by Alexander I of Russia to St. Petersburg where they stayed from April to June in 1803, and from where they started their journey back home. They were included in the Rezanov mission on the first Russian global circumnavigation by a ship Nadezhda. It took them 16 months to reach the port of Nagasaki, Japan in September, 1804 since they left in June, 1803. Of the sixteen, five crewmen got on board. Four returned home in Sendai; one, who had become an interpreter, returned to Russia with Rezanov.
DOI: 10.15468/dl.xd5wk8
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_2_GID","value":"USA.1.27_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007124-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gvuadv
title: Occurrence Download

description: A dataset containing 115968 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hippophae rhamnoides L."
 ]
}

 The dataset includes 115968 records from 678 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007508-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.asxns7
title: Occurrence Download

description: A dataset listing the 30434 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bacteria"
 ]
}

 The dataset's 30434 records were derived from 2293 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001561-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/14z-zw7-08r
title: †Kurnubia jurassica (Henson, 1948)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1y6-wr6-vs3
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0b9-l1v-5xm
title: Heteroschismoides Ludbrook, 1960

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1pb-7lb-arb
title: †Marginotruncana marginata (Reuss, 1845)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cx5-at1-b6z
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ebj-ca0-gqb
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b5m-xc2-fbs
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/66h-15c-5k9
title: Operculinella Yabe, 1918

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b9f-vnf-zbp
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dan-820-xj3
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bkk-055-058
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lnz-152-bpn
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5wa-jpv-vhf
title: Pteroplatus gracilis Buquet, 1840

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wtv-hg9-ddk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s73-2cs-8ns
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5zc-41a-x8p
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/99j-828-2n4
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5hd-dea-01w
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/93e-279-8n9
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5gz-f7k-1e4
title: †Dicarinella concavata (Brotzen, 1934)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jx5-wq4-6hj
title: Insecta

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6pf-vra-2bq
title: Cetacea Brisson, 1762

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cyr-ar6-7dx
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ade-8g3-a09
title: Ostracoda Latreille, 1802

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gk5-j4e-3dl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/66p-b5a-ml2
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vtp-ptc-t5h
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/653-54m-3x7
title: †Clavulinoides philippinica (Karrer, 1878)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.