cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1993444.08fu
title: SH1993444.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1993445.08fu
title: SH1993445.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh2683929.08fu
title: SH2683929.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh2683930.08fu
title: SH2683930.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh2683931.08fu
title: SH2683931.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1993446.08fu
title: SH1993446.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.25021337
title: Data from: Can overlooking ‘invisible landscapes’ bias habitat selection estimation and population distribution projections?

description: The README file explainshow to navigate between scriptsBecause of the size of simulated datasets (273G0), here, we provide all scripts required to generate data but provide only a small subsample of the simulated data.
DOI: 10.6084/m9.figshare.25021337.v2
title: Can overlooking ‘invisible landscapes’ bias habitat selection estimation and population distribution projections?

description: The README file explainshow to navigate between scriptsBecause of the size of simulated datasets (273G0), here, we provide all scripts required to generate data but provide only a small subsample of the simulated data.
DOI: 10.21227/yf9w-ha19
title: Exploring English Language Education: Curriculum Provided English Textbook for Classes 9 and 10 in Bangladesh

description: LinguoInsight English Textbook CorpusThe LinguoInsight English Textbook Corpus is a comprehensive dataset derived from (NCTB English Textbook class 9 and 10 of Bangladesh), a research study aimed at enhancing English language comprehension in diverse educational settings where English is a second language. The dataset is a result of an innovative unsupervised topic modeling approach utilizing Latent Dirichlet Allocation (LDA) through the LinguoInsight tool. The dataset aims to contribute to improved comprehension and acquisition skills by providing insights into the structure and thematic content of English textbooks. Potential applications of this dataset could be curriculum design and improvement, the development of educational technology tools for English language learning, and research on language acquisition and comprehension in diverse educational settings. Integration of NLP-driven approaches into mobile apps for enhanced learning experiences. Usage Recommendations:Researchers, educators, and developers can leverage this dataset to further explore and enhance English language learning methodologies, bridging the gap in comprehension challenges faced by students in diverse educational environments. The dataset encourages the development of innovative tools and strategies for more engaging and efficient learning experiences, particularly in regions where English is a second language.
DOI: 10.14459/2023mp1729943
title: Rawdataset to "Influence of compaction and curing in the Automated Fiber Placement Process on the mechanical performance of composite laminates"

description: This data set contains raw data on the basis of which paper "Influence of compaction and curing in the Automated Fiber Placement Process on the mechanical performance of composite laminates" was created. This includes, among other things, raw data from the mechanical characterization tests and images from the microCT scans.
DOI: 10.6084/m9.figshare.25027637
title: Supplementary Material for: An empirical survey on the adaption of neoadjuvant chemotherapy in bladder cancer

description: Objective:
To determine the adaption of neoadjuvant chemotherapy (NAC) in patients with muscle-invasive bladder cancer (MIBC) in Germany, Austria and Switzerland and especially underlying reasons for potential low adherence to guidelines. 
Methods:
We conducted a non-validated survey amongst 336 urologic departments in Germany, Austria and Switzerland. RedCap questionnaires were electronically distributed and included 23 items concerning the general NAC administration standards and guideline compliance in patient counselling regarding actual treatment.
Results:
Return rate of the questionnaire was 19.1% (63/336). Although 45 departments (71.4%) claim to perform NAC as standard-of-care, only 49% of eligible patients actually receive NAC. An advanced disease stage (≥cT3) and a high tumor-volume were mentioned to support application of NAC, whereas 35% of responders worry a deterioration of patients' preoperative status due to NAC. Furthermore, 26.7% of respondents are concerned about the low extent of survival benefit. 
Conclusion:
Application of NAC in eligible MIBC-patients in Germany, Austria and Switzerland remains low. Although the majority of urologic departments discusses NAC and acknowledges the need for intensified treatment in advanced disease stages, not all eligible patients will actually receive NAC before radical cystectomy.
DOI: 10.6084/m9.figshare.25027637.v1
title: Supplementary Material for: An empirical survey on the adaption of neoadjuvant chemotherapy in bladder cancer

description: Objective:
To determine the adaption of neoadjuvant chemotherapy (NAC) in patients with muscle-invasive bladder cancer (MIBC) in Germany, Austria and Switzerland and especially underlying reasons for potential low adherence to guidelines. 
Methods:
We conducted a non-validated survey amongst 336 urologic departments in Germany, Austria and Switzerland. RedCap questionnaires were electronically distributed and included 23 items concerning the general NAC administration standards and guideline compliance in patient counselling regarding actual treatment.
Results:
Return rate of the questionnaire was 19.1% (63/336). Although 45 departments (71.4%) claim to perform NAC as standard-of-care, only 49% of eligible patients actually receive NAC. An advanced disease stage (≥cT3) and a high tumor-volume were mentioned to support application of NAC, whereas 35% of responders worry a deterioration of patients' preoperative status due to NAC. Furthermore, 26.7% of respondents are concerned about the low extent of survival benefit. 
Conclusion:
Application of NAC in eligible MIBC-patients in Germany, Austria and Switzerland remains low. Although the majority of urologic departments discusses NAC and acknowledges the need for intensified treatment in advanced disease stages, not all eligible patients will actually receive NAC before radical cystectomy.
DOI: 10.6084/m9.figshare.25026785.v1
title: Original diet analysis data between sika deer and reeve's muntjac in the summer

description: Original diet analysis data between sika deer and reeve's muntjac in the summer included OTUs and quality filtering files based on highthroughput sequencing, they were uploaded to the Figshare system. These original data could support and strengthen the understanding of this paper.
DOI: 10.15161/oar.it/143331
title: Carta Geologica d'Italia alla scala 1:50.000, F. 633 Paternò

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 e 1:25.000 (eseguiti tra il 2001 e il 2004) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.15161/oar.it/143330
title: Carta Geologica d'Italia alla scala 1:50.000, F. 633 Paternò

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 e 1:25.000 (eseguiti tra il 2001 e il 2004) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.6084/m9.figshare.24995738
title: Datasets for Drought-induced seismicity modulation in the New Madrid Seismic Zone

description: Datasets for Drought-induced seismicity modulation in the New Madrid Seismic Zone
DOI: 10.6084/m9.figshare.24995738.v2
title: Datasets for Drought-induced seismicity modulation in the New Madrid Seismic Zone

description: Datasets for Drought-induced seismicity modulation in the New Madrid Seismic Zone
DOI: 10.6084/m9.figshare.24995738.v1
title: Datasets for Drought-induced seismicity modulation in the New Madrid Seismic Zone

description: Datasets for Drought-induced seismicity modulation in the New Madrid Seismic Zone
DOI: 10.15161/oar.it/143335
title: Carta Geologica d'Italia alla scala 1:50.000, F. 634 Catania

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 (eseguiti tra il 1998 e il 2001) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.15161/oar.it/143334
title: Carta Geologica d'Italia alla scala 1:50.000, F. 634 Catania

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 (eseguiti tra il 1998 e il 2001) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.5522/04/25020907
title: AFM liver tissue data

description: This dataset consists of 27 tissue samples collected from 7 patients suffering from colorectal or pancreatic cancer metastasis who underwent curative liver resection surgery. Tissue punches were collected from healthy and tumour regions during surgery. Each section was measured using an atomic force microscope (AFM) to extract the elastic modulus of the tissue at multiple sites. Microscope images were captured of the whole sample as well as at each measurement site, allowing for spatial localization of each measurement. In some cases, the section was stained post-hoc with haemotoxylin and eosin (H&E), providing ground-truth validation of tissue pathology.There are two datasets available:1. The full liver tissue dataset (46.4 GB), which for each sample containsRaw and processed AFM measurement data for each measurement site (multiple formats: .csv and .mat for processed data)4X microscopy image of the unstained tissue sample (RGB TIFF)4X microscopy images of each measurement site (RGB TIFFs)Annotated image showing spatially localized measurement sites (RGB TIFF)MATLAB workspaces of the registration results (.mat)20X microscopy image of the post-measurement stained sample (RGB TIFF) <i>(Note: not all samples contain stained images)</i>Predicted whole-sample elastic modulus maps produced by a GAN detailed here (32-bit float TIFF)2. The image patch training dataset (8.84 MB):308 training and 78 validation sets, each containing:- 64 x 64-pixel unstained tissue sample image patches (8-bit grayscale)- 32 x 32-pixel tissue topology maps (32-bit float)- 32 x 32-pixel elastic modulus maps (32-bit float)
DOI: 10.5522/04/21318339.v1
title: Quantics input files for 1,1-difluoroethylene

description: Input and operator files to calculate state populations and spectra of photo-excited 1,1-difluoroethylene using the Quantics program. Theses files can be used together with Quantics to generate the data in the paper Gomez et al (Can. J. Chem., 101:745–757, 2023). The files are standard ascii files, grouped into directories for the different systems studied. The Quantics program is a mostly Fortran code for running quantum dynamics simulations. It is open source and runs on linux workstations. It is freely available on request to the authors of the paper. For further details of the program see Comp. Phys. Comm., 248:107040–15, 2020.
DOI: 10.5522/04/21318339
title: Quantics input files for 1,1-difluoroethylene

description: Input and operator files to calculate state populations and spectra of photo-excited 1,1-difluoroethylene using the Quantics program. Theses files can be used together with Quantics to generate the data in the paper Gomez et al (Can. J. Chem., 101:745–757, 2023). The files are standard ascii files, grouped into directories for the different systems studied. The Quantics program is a mostly Fortran code for running quantum dynamics simulations. It is open source and runs on linux workstations. It is freely available on request to the authors of the paper. For further details of the program see Comp. Phys. Comm., 248:107040–15, 2020.
DOI: 10.25442/hku.24922164
title: Supporting data for “LAGUERRE PATH-DEPENDENT VOLATILITY MODEL"

description: This is the dataset that is synthesized to conduct the numerical experiment of model calibration and option pricing using the proposed LPDV model and the benchmark model in the study. The methodology for the synthesis of this dataset is outlined in the study. Asset prices can be obtained directly from the field S_t. Local volatility surfaces can be recovered from the field state according to the model parameters given in the study. Both the LPDV model and the benchmark model are then calibrated to the asset prices and the local volatilities surfaces. The calibrated models are then used to produce option prices of selected option payoffs for discussions.
DOI: 10.5281/zenodo.10512571
title: Data for Tree-scale carbon allocation in a mixed forest publication (Yishi forest)

description: Disentangling species-specific strategies and contribution to the C balance of mixed forests, requires observations at the individual tree-level. We measured a complete set of C pools and fluxes at the tree-level in five tree species, conifers and broadleaves, co-existing in a mature evergreen mixed Mediterranean forest. 

Field measurements of mature trees were conducted in 1 ha forest research plot at the Judean foothills in Israel (Yishi forest, 31º 43´N 34º 57´E, 320 m elevation) (Klein et al. 2013, Lapidot et al. 2019, Rog et al. 2021b). The climate is Mediterranean with annual precipitation of 510 mm falling between Sep and May, rendering May-Sep as a prolonged drought. Mean diurnal temperatures are 16.0°C in February and 25.3°C in August.

During two consecutive hydrological years (Oct 2017 to Sep 2019) we assessed monthly C mass pool sizes and fluxes and up-scaled them to the compartment and tree levels. For this purpose, we combined direct and indirect measurements and data from previous onsite studies
DOI: 10.5281/zenodo.10512572
title: Data for Tree-scale carbon allocation in a mixed forest publication (Yishi forest)

description: Disentangling species-specific strategies and contribution to the C balance of mixed forests, requires observations at the individual tree-level. We measured a complete set of C pools and fluxes at the tree-level in five tree species, conifers and broadleaves, co-existing in a mature evergreen mixed Mediterranean forest. 

Field measurements of mature trees were conducted in 1 ha forest research plot at the Judean foothills in Israel (Yishi forest, 31º 43´N 34º 57´E, 320 m elevation) (Klein et al. 2013, Lapidot et al. 2019, Rog et al. 2021b). The climate is Mediterranean with annual precipitation of 510 mm falling between Sep and May, rendering May-Sep as a prolonged drought. Mean diurnal temperatures are 16.0°C in February and 25.3°C in August.

During two consecutive hydrological years (Oct 2017 to Sep 2019) we assessed monthly C mass pool sizes and fluxes and up-scaled them to the compartment and tree levels. For this purpose, we combined direct and indirect measurements and data from previous onsite studies
DOI: 10.5281/zenodo.10532600
title: Case Study for the Paper: How LLMs Aid in UML Modeling: An Exploratory Study with Novice Analysts
DOI: 10.5281/zenodo.10532601
title: Case Study for the Paper: How LLMs Aid in UML Modeling: An Exploratory Study with Novice Analysts
DOI: 10.5258/soton/d2934
title: Dataset for Doctoral Thesis 'Physiology of rest/activity cycles in Drosophila melanogaster'

description: This dataset includes the luciferase data, tracking data, code to analyse, used for the doctoral thesis.
DOI: 10.5517/ccdc.csd.cc2grgnc
title: CCDC 2286673: Experimental Crystal Structure Determination

description: Related Article: Xiong Sun, Zhuoyi Xie, Shuyi Li, Hanfei Cao, Yeli Fan, Pinggui Li, Lianghua Zou|2024|Polyhedron|249|116773|doi:10.1016/j.poly.2023.116773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2grgpd
title: CCDC 2286674: Experimental Crystal Structure Determination

description: Related Article: Xiong Sun, Zhuoyi Xie, Shuyi Li, Hanfei Cao, Yeli Fan, Pinggui Li, Lianghua Zou|2024|Polyhedron|249|116773|doi:10.1016/j.poly.2023.116773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2grgrg
title: CCDC 2286676: Experimental Crystal Structure Determination

description: Related Article: Xiong Sun, Zhuoyi Xie, Shuyi Li, Hanfei Cao, Yeli Fan, Pinggui Li, Lianghua Zou|2024|Polyhedron|249|116773|doi:10.1016/j.poly.2023.116773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2grgsh
title: CCDC 2286677: Experimental Crystal Structure Determination

description: Related Article: Xiong Sun, Zhuoyi Xie, Shuyi Li, Hanfei Cao, Yeli Fan, Pinggui Li, Lianghua Zou|2024|Polyhedron|249|116773|doi:10.1016/j.poly.2023.116773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.