cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8422549
title: Invasive macroalgae shape chemical and microbial waterscapes on coral reefs

description: Over the past decades, human impacts have changed the structure of tropical benthic reef communities towards coral depletion and macroalgal proliferation. However, how these changes have modified chemical and microbial waterscapes is poorly known. Here, we assessed how the experimental removal of macroalgal assemblages influences the chemical and microbial composition of two reef boundary layers, the benthic and the momentum. Chemical and microbial waterscapes were spatially structured, both horizontally and vertically, according to macroalgal dominance and boundary layers. Microbes associated with reef degradation were enriched in the boundary layers surrounding macroalgal-dominated substrata. Dominant macroalgae were surrounded by a distinct chemical pool of diverse lipid classes (e.g., diterpenoids and glycerolipids) and labile organic matter (e.g., organooxygen compounds), which diffused from algal tissues to boundary layers according to their polarity. Finally, our results highlighted strong co-variations between specific algal-derived metabolites and planktonic microbes, giving insight into their roles in coral reef functioning and resilience.
description: Data and scripts for the manuscript "Invasive macroalgae shape chemical and microbial waterscapes on coral reefs"



Reefwater microbiome and metabolome analysis










Microbiome : seqtab.no1.rds, taxa_NS.rds and reefwater_sampleMetadata.csv. To use with script "reefwater microbiome analysis.R"




Metabolome : reefwater_posMZmine_wblanksQC.csv (MS1 feature intensities) and eaux_pos.sampleMetadata.csv. To use with script " reefwater metabolome_posMS analysis.R"




Multiomic :  "multiomic_processed data". To use with script "multiomic_reefwater_DIABLO.R"







Algal metabolites diffusion and molecular network analysis










Venn Diagrams, Compounds polarity: endosurf_posMZmine_MS1_quant.csv (MS1 feature peak intensities). To use with script "algal metabolites MS1.R"




Discriminant features, Molecular network analysis and annotations in positive ionization mode: endosurf_posMZmine_GNPS_wblanksQC_gap_quant.csv (MS1 features with MS2 peak intensities),endosurf_sw_pos_fbmnextra_gap.csv (FBMN output), sirius_classif_pos.xlsx, sirius_compID_pos.xlsx. To use with script "algal metabolites MS2_FBMN.R"


Discriminant features, Molecular network analysis and annotations in negative ionization mode: endosurf_sw_neg_quant_table.csv, endosurf_sw_neg_fbmn.csv, sirius_classif_neg.csv, sirius_compID_neg.csv. To use with script "algal metabolites MS2_FBMN_neg".R
DOI: 10.3535/lyz-l0y-0yg
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p7n-gdv-ah3
title: Ascocotyle septentrionalis (Van den Broek, 1967) Gustinelli, Caffara, Scaravelli, Fioravanti & Scholz, 2021

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/eym-1hl-sv8
title: Nephtys hombergii Savigny in Lamarck, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pye-yc3-1sd
title: Paramphistomum Fischoeder, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9ef-4wf-xab
title: Nicidion mutilata (Webster, 1884)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b7g-9qy-9vz
title: Glossiphonia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cvw-nhk-9rh
title: Hediste diversicolor (O.F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1th-jbx-haw
title: Polydora ciliata (Johnston, 1838)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gzk-vya-145
title: Nephtys Cuvier, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xgb-rch-0t3
title: Pristina (Pristina) proboscidea Beddard, 1896

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jne-e3b-2dn
title: Echinoparyphium recurvatum (von Linstow, 1873) Lühe, 1909

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mex-byf-g2r
title: Parasagitta setosa (J. Müller, 1847)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0e4-g5p-b8c
title: Apatemon gracilis (Rudolphi, 1819) Szidat, 1928

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lxr-d5q-8rf
title: Dugesia japonica Ichikawa & Kawakatsu, 1964

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p52-z9n-f63
title: Proteocephalus macrocephalus (Creplin, 1825) Nufer, 1905

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qvb-08s-wla
title: Pheretima Kinberg, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e3b-skf-bvw
title: Phagocata iwamai Ichikawa & Kawakatsu, 1962

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n44-hfj-nqk
title: Nereis pelagica Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7v2-j91-2va
title: Nereis pelagica Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hyc-nmn-crn
title: Pristina (Pristina) Ehrenberg, 1831

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qly-kc6-nq6
title: Phagocata kawakatsui Okugawa, 1956

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5cj-n4b-3ys
title: Heteromastus filiformis (Claparède, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lyc-gwg-vzk
title: Fasciolopsis buskii (Lankester, 1857) Stiles, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gz5-0cg-clr
title: Hydroides elegans (Haswell, 1883) [nomen protectum]

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kag-cbs-tmm
title: Vejdovskyella (Vejdovskyella) Michaelsen, 1903

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8a4-dma-h7q
title: Alitta succinea (Leuckart, 1847)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k4x-bmd-whm
title: Zyras (Craspa) Blackwelder, 1952

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5l8-2rh-tpm
title: Vermiliopsis infundibulum (Philippi, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qqx-4e6-h9n
title: Dugesia japonica Ichikawa & Kawakatsu, 1964

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/llr-98y-sba
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cl1-p52-g34
title: Lepidonotus squamatus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tbj-v69-wd5
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mp4-x38-g3t
title: Parafilaroides gymnurus (Railliet, 1899) Dougherty, 1946

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zdc-nvj-g7r
title: Longistrongylus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3c8-9mr-dlz
title: Perinereis macropus (Claparède, 1870)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vnb-1dz-7rf
title: Setaria cervi (Rudolphi, 1819) Baylis, 1936

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3938236_d1.v1
title: Additional file 1: Table S1. of Evidence of high-altitude adaptation in the glyptosternoid fish, Creteuchiloglanis macropterus from the Nujiang River obtained through transcriptome analysis

description: Sequencing output result of all eleven mixed samples. Q20 represents the percentage of quality score of bases that above 20. Q30 represents the percentage of quality score of bases that above 30. Table S2. FPGs (The overlaps of genes of the fast evolving genes (FEGs) and positively selected genes (PSGs)). Table S3. Mutual DEGs (differentially expressed genes) that best reciprocal BLAST hits with zabrafish in all pairwise comparisons (High vs. Mid, Mid vs. Low and High vs. Low). Table S4. Genes in cluster 1 (the largest gene group in the resluts of co-expression analysis) which were highly expressed in individuals from high-altitude. Table S5. Highly expressed gene in tissues from high-altitude. Table S6. GO terms enriched by genes of FPGs, DEGs and HEGs. (XLSX 73 kb)
DOI: 10.3535/xjp-p0b-e7q
title: Polynoidae Kinberg, 1856

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3938236_d1
title: Additional file 1: Table S1. of Evidence of high-altitude adaptation in the glyptosternoid fish, Creteuchiloglanis macropterus from the Nujiang River obtained through transcriptome analysis

description: Sequencing output result of all eleven mixed samples. Q20 represents the percentage of quality score of bases that above 20. Q30 represents the percentage of quality score of bases that above 30. Table S2. FPGs (The overlaps of genes of the fast evolving genes (FEGs) and positively selected genes (PSGs)). Table S3. Mutual DEGs (differentially expressed genes) that best reciprocal BLAST hits with zabrafish in all pairwise comparisons (High vs. Mid, Mid vs. Low and High vs. Low). Table S4. Genes in cluster 1 (the largest gene group in the resluts of co-expression analysis) which were highly expressed in individuals from high-altitude. Table S5. Highly expressed gene in tissues from high-altitude. Table S6. GO terms enriched by genes of FPGs, DEGs and HEGs. (XLSX 73 kb)
DOI: 10.3535/dg9-77t-j23
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tct-8fy-tht
title: Phagocata tahoena Kawakatsu, 1968

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/alr-gxh-432
title: Paracanthonchus Micoletzky, 1924

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gpd-xzn-5cm
title: Proteocephalus ambiguus (Dujardin, 1845) Weinland, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j18-zwv-zle
title: Eunice vittata (Delle Chiaje, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kvx-8bs-4d2
title: Solidosagitta planctonis (Steinhaus, 1896)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/90f-e04-mvc
title: Prodesmodora circulata Micoletzky, 1925

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h0g-a66-nzj
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.enmhu5
title: Occurrence Download

description: A dataset containing 1418 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-3.90209 36.70317,-3.79656 36.70317,-3.79656 36.76816,-3.90209 36.76816,-3.90209 36.70317))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1418 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039620-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/jlz-exk-pmf
title: Jasmineira elegans Saint-Joseph, 1894

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jqt-kym-jsy
title: Hediste diversicolor (O.F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tgr-hgm-aj5
title: Spirobranchus triqueter (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/99b-nda-835
title: Rhabdias bufonis (Schrank, 1788) Stiles & Hassall, 1905

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/21w-0h0-h0x
title: Hediste diversicolor (O.F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vxn-12d-kye
title: Skrjabingylus nasicola (Leuckart, 1842)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/et3-9yj-njt
title: Schistosoma bovis (Sonsino, 1876) Blanchard, 1895.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qfm-d1l-lht
title: Eunereis longissima (Johnston, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b0f-s3z-c4l
title: Hydroides dirampha Mörch, 1863

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xyq-6jd-r09
title: Phyllodoce maculata (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2y4-3ne-cte
title: Proteocephalus tetrastomus (Rudolphi, 1810) Willemse, 1969

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5b4-fbk-0wr
title: Pygospio elegans Claparède, 1863

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w0d-0jv-r33
title: Stenostomum Schmidt, 1848

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yqr-taa-j6a
title: Dugesia hymanae (Sivickis, 1928)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dta-65d-e6s
title: Laonice Malmgren, 1867

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gsx-rj6-q2f
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b8x-xe4-7py
title: Mexieulepis weberi (Horst, 1922)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v4c-7t5-955
title: Phagocata vivida (Ijima & Kaburaki, 1916)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hj6-swx-kp8
title: Hydroides brachyacantha Rioja, 1941

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qe0-nvp-j6l
title: Perinereis suluana (Horst, 1924)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9g0-kt8-da7
title: Lamellibrachia luymesi van der Land & Nørrevang, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y02-lab-skf
title: Eulalia venusta de Saint Joseph, 1888

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gge-cpj-48r
title: Heteromastus filiformis (Claparède, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/77y-jwb-760
title: Eurythoe complanata (Pallas, 1766)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dht-kcy-s6b
title: Naididae Ehrenberg, 1831

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9gt-k8z-kfc
title: Eumida sanguinea (Örsted, 1843)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n8p-mmw-x3v
title: Paramphistomum Fischoeder, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n6l-3tt-cac
title: Ophelia borealis Quatrefages, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1fh-5wj-k6v
title: Serratosagitta serratodentata (Krohn, 1853)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7rs-n3e-wf6
title: Nephtys Cuvier, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/98w-3wt-c82
title: Lamellibrachia luymesi van der Land & Nørrevang, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dv2-cge-y72
title: Seidlia akkeshi (Ichikawa & Kawakatsu, 1963)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b8s-4ye-nqb
title: Erpobdella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tl2-d6l-9mh
title: Proteocephalus ambiguus (Dujardin, 1845) Weinland, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ybf-y0k-kx0
title: Ophelia borealis Quatrefages, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.57745/kky3km
title: Pure_Tri_0N_A12_20240321_144206_mask.png

description: :unav
DOI: 10.57745/g4tl5z
title: Pure_Tri_0N_A12_20240321_144340_mask.png

description: :unav
DOI: 10.57745/sn7tjn
title: Intercropping_Mixed_REDN11_20240408_151029.jpg

description: :unav
DOI: 10.57745/chex77
title: Pure_tri_0N_A12_20240422_152916_mask.png

description: :unav
DOI: 10.57745/dok0gt
title: Pure_Faba_REDN4_20240422_164125_mask.png

description: :unav
DOI: 10.57745/xhjb6a
title: Pure_tri_TS_REDN4_20240408_143741.jpg

description: :unav
DOI: 10.57745/ixwqlp
title: Intercropping_Mixed_A12_20240422_161450_mask.png

description: :unav
DOI: 10.57745/8mnk0a
title: Pure_tri_0N_REDN11_20240422_153954.jpg

description: :unav
DOI: 10.57745/vbdpa5
title: Pure_Faba_REDN11_20240422_163947.jpg

description: :unav
DOI: 10.57745/tsfdwy
title: Intercropping_Mixed_HUAP30_20240408_151539.jpg

description: :unav
DOI: 10.57745/vjyeeh
title: Pure_tri_TS_REDN11_20240422_154503_mask.png

description: :unav
DOI: 10.57745/wkpalg
title: Pure_Faba_REDN4_20240408_152342.jpg

description: :unav
DOI: 10.57745/bvqrfo
title: Intercropping_Mixed_REDN4_20240321_160347.jpg

description: :unav
DOI: 10.57745/xdvrjw
title: Intercropping_In_row_REDN4_20240422_160719.jpg

description: :unav
DOI: 10.15468/dl.dmdbzj
title: Occurrence Download

description: A dataset containing 230 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "DatasetKey is one of (DIBA-Parc Natural del Montseny, Col·lecció de plantes de l'herbari de la Universitat de Barcelona, CSIC-Real Jardín Botánico-Colección de Plantas Vasculares (MA), VIT Herbarium - Vascular Plants (The Natural History Museum of Alava))",
 "Geometry POLYGON((-2.4435 44.00704,-5.55756 44.08843,-7.82233 44.04774,-9.35105 43.68035,-9.40767 41.80947,-6.74656 41.59811,-7.25614 39.8823,-7.70909 38.2115,-7.70909 36.81937,-7.82233 35.99918,-4.93475 35.86164,-1.99055 36.27353,-0.40521 37.27128,0.5007 38.96385,0.7838 40.229,2.42576 40.8743,3.95448 42.27201,-2.4435 44.00704))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Senecio inaequidens"
 ]
}

 The dataset includes 230 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004872-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/ozhnbf
title: Pure_tri_0N_REDN11_20240321_143630_mask.png

description: :unav
DOI: 10.57745/vai3mw
title: Pure_Faba_REDN11_20240408_152617.jpg

description: :unav
DOI: 10.57745/yicimq
title: Intercropping_Mixed_REDN4_20240321_155738.jpg

description: :unav
DOI: 10.15468/dl.h6gnza
title: Occurrence Download

description: A dataset containing 261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Millettia pachyloba Drake)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 261 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024756-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15076263
title: AuNPs
DOI: 10.5281/zenodo.15076264
title: AuNPs
DOI: 10.17632/kvbjv9w9yy.1
title: Internal Self-benefit or External Self-benefit? The Effects of Message Appeals and Regulatory Focus on Blood Donation Intention
DOI: 10.17632/5ydgs39r2z.1
title: Ecology of eastern and southern festoons: dataset and software

description: The dataset contains the R script used to explore the differences between ecological niches of eastern (Zerynthia cerisy) and southern festoon (Zerynthia polyxena) and the species observation points from GBIF and Biologer databases. The raster files used to extract variables of interest are not included, but are freely available online. Follow the R script for detailed methodology and read the paper entitled "Ecology of eastern and southern festoons: living in a city or thriving in semi-natural areas?" for more details. The study demonstrated eastern festoon preference towards the urban environments, that provides similar ecological niche compared to the original habitats found in Mediterranean. On the other hand, southern festoon is found in more natural environments that resemble species natural habitats found along the river banks in the temperate regions of Europe and Asia.
DOI: 10.5281/zenodo.13889769
title: Extracted trails from airborne laser scanning in the Oostvaardersplassen nature reserve

description: Ungulates and other mammalian herbivores can create trails in dense vegetation by trampling and browsing. This can affect vegetation structure and results in the fragmentation of closed, high vegetation, with subsequent impacts on biodiversity. Manually mapping trails in the field or from aerial photographs can be challenging and time consuming, especially in inaccessible or difficult to access habitats such as wetlands and if trails occur beneath the canopy. Airborne laser scanning provides an alternative method because it penetrates vegetation canopies and efficiently obtains highly accurate data in the form of dense 3D point clouds. This repository consists of the extracted trails in wetland area of the Oostvaardersplassen nature reserve in the Netherlands using 3D airborne point cloud data (AHN4) and the manually created 50 plots of ground truth in two regions, i.e. grazed only by red deer and grazed by both red deer and geese.