cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/775hs9wrb5
title: Acute lymphoblastic leukaemia maintenance therapy dataset

description: This anonymised dataset collection refers to patients with acute lymphoblastic leukaemia (ALL) treated at a single institution (Tata Medical Center, Kolkata, India) during the maintenance treatment phase (MT), as part of the Indian Collaborative Childhood Leukaemia (ICiCLe-ALL-14) treatment protocol (1). The MT phase spans 96 weeks, split into eight 12-week cycles 
 
Each patient dataset contains longitudinal records of blood counts (absolute neutrophil counts [ANC] and platelet counts [PLT]) and the accompanying drug doses of 6-mercaptopurine (6MP) and oral methotrexate (MTX) prescribed at each dose advice visit (indicated by the date and MT cycle) through the 96 weeks of MT. 6MP and MTX doses are recorded both as absolute doses (milligrams per week) and as dose intensities (DI, percentage proportion of protocol-recommended doses) of 6MP (6MP_DI) and MTX (MTX_DI).
 
The companion dataset ‘cohort demographics’ provides relevant patient- (age at ALL diagnosis, sex) and disease-related information (ALL immune lineage [B or T-lineage] and highest white blood cell [WBC] count at presentation)
 
This dataset allows analysis of dose titration practice in individual patients and in patient cohorts (2)(3). 
 
Dataset interpretation: For patient UPN_1, row 1 is interpreted as follows: The patient visited the hospital on 08/05/2014 (dd/mm/yyyy) during MT Cycle 1 and had a blood count test. Results showed ANC and PLT counts of 1.148 x10^9/L and 186× 10^9/L, respectively. Based on these values, the physician prescribed 323 mg/week of 6MP, which corresponds to 99% 6MP dose intensity (6MP_DI) and 15.5 mg/week of MTX, which corresponds to 100% MTX dose intensity. For dose intensity calculations, prescribed doses are reported as a proportion of protocol-recommended doses of 6MP (420 mg/sqm/week) and MTX (20 mg/sqm/week) (1). BSA or body surface area (recorded in square metres, sqm) information is used for calculation of protocol-recommended doses.  

References:
1. Das N, Banavali S, Bakhshi S, Trehan A, Radhakrishnan V, Seth R, Arora B, Narula G, Sinha S, Roy P, Gogoi MP. Protocol for ICiCLe-ALL-14 (InPOG-ALL-15-01): a prospective, risk stratified, randomised, multicentre, open label, controlled therapeutic trial for newly diagnosed childhood acute lymphoblastic leukaemia in India. Trials. 2022;23:102.

2. Mungle T, Mahadevan A, Krishnan S. allMT: Acute Lymphoblastic Leukemia Maintenance Therapy Analysis. The Comprehensive R Archive Network 2023. https://CRAN.R-project.org/package=allMT.

3. Mahadevan A, Mungle T, Krishnan S. VIATAMIN: VIsualisation & Analysis Tool in ALL MaINtenance. ShinyApps 2023. https://ananyam.shinyapps.io/VIATAMIN/.
DOI: 10.17632/8v2zgvrf4t
title: Oceanographic dataset

description: The Oceanographic dataset is a comprehensive collection of physical, chemical, and biological parameters designed for monitoring and predicting ocean deoxygenation. It includes key variables such as temperature, salinity, dissolved oxygen (DO), pH, nutrients (nitrate, phosphate, silicate), and biological indicators like chlorophyll-a concentration and primary productivity. This dataset plays a crucial role in identifying hypoxic zones, modeling oxygen dynamics, and tracking long-term deoxygenation trends driven by climate change and anthropogenic activities. By facilitating the development and validation of predictive models, it enhances the accuracy of forecasting future hypoxic events. Beyond deoxygenation analysis, the dataset supports broader applications, including climate impact studies, marine ecosystem health assessments, and policy-making for ocean conservation. With its rich temporal and spatial coverage, it serves as a valuable resource for scientific research, education, and data-driven decision-making in marine and environmental sciences.
DOI: 10.17632/fk29shm2kn
title: Dataset Of Animal Images

description: The Animal Image Dataset is a curated collection of high-resolution images of eight animals, including rabbits, goats, sheep, dogs, cows, hens, cats, and deer. This dataset focuses on night vision skills and includes photos taken in low-light circumstances to replicate nighttime driving scenarios. This focus assures that the dataset is particularly valuable for vehicles to detect and respond to animals in the dark, improving safety and lowering the chance of collisions while driving at night.
DOI: 10.17632/z3pkpdw6z4
title: Vasopressin drives aberrant myeloid differentiation of hematopoietic stem cells in depression

description: Psychological stress is often linked to depression and can also impact the immune system, illustrating the interconnectedness of mental health and immune function. Hematopoietic stem cells (HSCs) can directly sense neuroendocrine signals in bone marrow and play a fundamental role in the maintenance of immune homeostasis. However, it is still unclear how psychological stress impacts HSCs in depression. Here, we report that neuroendocrine factor arginine vasopressin (AVP) promotes myeloid-biased HSC differentiation by activating neutrophils. AVP administration increases neutrophil and Ly6Chi monocyte production by triggering HSCs that rely on intrinsic S100A9. When stimulated with AVP, neutrophils return to the bone marrow and release IL36G, which interacts with IL1RL2 on HSCs to produce neutrophils with high Elane expression that infiltrate the brain and induce neuroinflammation. Together, these findings define HSCs as a relay between psychological stress and myelopoiesis, and identify the IL36G-IL1RL2 axis as a potential target for depression therapy.
DOI: 10.6084/m9.figshare.29043038.v1
title: Tobermorites DFT datasets for MLPs

description: Several DFT datasets derived from CP2K calculation.
DOI: 10.17632/59d4n56792
title: How biased media generate support for the ruling authorities: Causal mediation analysis of evidence from Russia

description: If a medium has a monopoly in covering political news and daily distorts the news in favor of the ruling autocrat, how large will the persuasion effect be? Through which channels will such persuasion operate most? Working with a representative sample of the Russian population, I use a causal mediation analysis to figure out whether (1) frequency of exposure and/or (2) reliance on biased reporting mediate the link between how people voted for incumbent elites and how they evaluate these elites in the present. Perceiving explicitly biased information as credible transmits a large and robust effect from voting to evaluation, while frequent exposure to this information produces an insignificant mediating effect. Another important finding is that the effect of perceived news credibility overrides the effect of electoral support: accepting state propaganda as credible information converts people into regime supporters regardless of their previous voting.
DOI: 10.6084/m9.figshare.1224310.v2
title: Inter- and intra-specific diversity of Cuban <i>Pinguicula</i> (Lentibulariaceae) based on morphometric analyses and its relation with geographical distribution

description: <b><i>Background:</i></b> Phenotypic variations have been observed in populations of west Cuban <i>Pinguicula</i> species. Such populations occur in patches under different ecological conditions associated with specialised habitats and separated by geographical and ecological barriers, which can lead to morphological differentiation.<b><i>Aims:</i></b> To analyse morphological diversity among species and populations of Cuban <i>Pinguicula</i>; and to test if morphological variability is associated with geographical distribution and distance between populations.<b><i>Methods:</i></b> We sampled a total of eight populations of <i>P. albida</i>, <i>P. cubensis</i> and <i>P. filifolia</i> and tested for morphometric differences among them by Principal Component Analysis (PCA) and analysis of variance (ANOVA) based on 31 quantitative traits. We also assessed the geographical isolation with respect to morphological distance.<b><i>Results:</i></b> The studied species showed high morphological variability at both species and population level. Reproductive characteristics appeared to be more promissory than vegetative ones in distinguishing geographical groups since they clearly defined populations; nevertheless a strong component of individual variation was observed. According to the distance analysis, such morphological variations were correlated with fragmented populations and isolation and allowed the differentiation of two morphotypes of <i>P. albida</i> and two of <i>P. filifolia</i>.<b><i>Conclusions:</i></b> We conclude that high phenotypic variation of the analysed species is related to geographical and ecological isolation which have led to the differentiation of morphotypes within species.
DOI: 10.17632/39mmgjys7k
title: Thirty-five-color Spectral Flow Cytometry Panel for Total and Phosphorylated Protein Status, and Deep Immunophenotyping of Major Cell Subsets in Human Peripheral Blood

description: Raw flow cytometry data using human peripheral blood mononuclear cells.
DOI: 10.17632/j6kjmfrbby
title: Hausa Speech Corpus

description: This is a Hausa Speech data set that was recorded as a baseline for Hausa Speech Recognition. The data sets can be used in building Automatic Speech recognition for Hausa language, Speech synthesis and speaker recognition.
DOI: 10.6084/m9.figshare.25750842.v1
title: <b>Metabolic Syndrome and Anxiety Levels in Light and Heavy Smokers</b>

description: Data
DOI: 10.17632/ktgcp4mtk2
title: ALDH1L1 bacTRAP microarray from striatum 12, 24, and 48 hrs post-MPTP exposure (mice)

description: Raw data from Illumina MouseRef-8 v2 Expression BeadChip microarray. ALDH1L1 bacTRAP mice were exposed to a single dose of MPTP (12.5 mg/kg, s.c.) or saline and sacrificed at 12, 24, or 48 hours post-exposure. Astrocyte RNA was isolated from pooled striatal tissue (7 mice/sample; 2-3 samples per group) following the TRAP procedure [Heiman et al. (2014) Cell type-specific mRNA purification by translating ribosome affinity purification (TRAP). Nat Protoc, 9: 1292-1291.]
DOI: 10.17632/rhjr3czc9k
title: Data for: Ozone impact on wheat in Europe, Asia and North America - a comparison

description: Data extracted from the scientific literature to compare ozone sensitivity in wheat on different continents.
DOI: 10.6084/m9.figshare.5121724.v1
title: Supplementary Material for: Analysis of Sexually Dimorphic Expression of Genes at Early Gonadogenesis of Pejerrey <i>Odontesthes bonariensis</i> Using a Heterologous Microarray

description: The process of morphological development of a differentiated gonad from an undifferentiated primordium is a very important step of gonadogenesis. Studies on sexually dimorphic gene expression are important to increase our understanding of this process and to investigate how environmental factors such as temperature can regulate gonadal development. The aim of this study was to identify putative genes involved in sex differentiation in pejerrey <i>(Odontesthes bonariensis) </i>reared at male- and female-producing temperatures (MPT and FPT, respectively) using a microarray heterologous from the medaka <i>(Oryzias latipes)</i>, a closely phylogenetic species. Genes related to numerous processes presented higher expression at MPT, including those involved in muscular contraction, metabolic pathways, developmental processes, and reproduction. Genes induced by FPT were classified under the gene ontology terms of response to stimulus, transport and proteolysis. From genes selected for validation, at MPT <i>ndrg3</i> expression was observed in the somatic cells, whereas <i>pen-2</i> was detected in germ cells in the caudal portion of the gonads, where no apoptotic signals were observed. Finally, <i>hsp90</i> was highly expressed in somatic cells of the gonads at the FPT. The results suggest that the interplay of pro-apoptotic and anti-apoptotic genes is important during the masculinization process and for the prevention of sterility following exposure to warm temperatures.
DOI: 10.17632/shwpvfb9sr
title: Monthly beach profile surveys of the Shoalhaven Coastal Compartment, Australia

description: This data repository hosts the monthly beach profile surveys undertaken between December 2013 and November 2015 using RTK-GPS at all three beaches of the Shoalhaven Coastal Compartment, on the southeastern coast of Australia. Four profiles were monitored at Seven Mile Beach-Comerong Island (SH1, SH2, SH3 and SH4) and three profiles were monitored at Culburra (CU1-CU2 and CU3) and Warrain-Currarong (WA1, WA2 and WA3) beaches. Profiles, scheduled at low tide, were surveyed at a 1 m interval across the beaches down to 0 m AHD (Australian Height Datum). Technical problems prevented the collection of data during specific months at some locations and no surveys were conducted during the months of June 2014, January 2015, April 2015 and May 2015. Profile locations (GDA_1994_MGA_Zone_56; Transverse_Mercator): SH1: 299,394.613 Lon 6,149,853.897 Lat SH2: 296,939.003 Lon 6,147,702.392 Lat SH3: 294,278.257 Lon 6,141,141.964 Lat SH4: 294,243.712 Lon 6,137,602.183 Lat CU1: 295,855.795 Lon 6,134,693.361 Lat CU2: 295,943.708 Lon 6,133,321.577 Lat CU3: 296,526.167 Lon 6,132,352.159 Lat WA1: 297,084.590 Lon 6,131,777.251 Lat WA2: 297,907.127 Lon 6,125,922.995 Lat WA3: 300,671.613 Lon 6,123,136.590 Lat
DOI: 10.17632/9zxht4rchk
title: MacFawn et al 2024. Cancer Cell. The activity of tertiary lymphoid structures in high grade serous ovarian cancer is governed by site, stroma, and cellular interactions

description: Referenced data from manuscript and Key Resource Table.
DOI: 10.6084/m9.figshare.25627485.v1
title: (Database) Development and Validation of Inertial Measurement Unit System for Tracking Wheelchair Sports Kinematics

description: <b>Purpose:</b> Inertial Measurement Unit (IMU) system was developed for tracking wheelchair sports kinematics which installed on the left side of the wheel axle. The researchers developed the data processing system and designed the Graphical User Interface (GUI) that displays the kinematic data of the wheelchair. It allows trainers to track wheelchairs to gather data for analyzing and developing wheelchair athletes’ skills and fitness. It can be used in both competitive and training sessions. This research aims to study the validition of developed IMU system for tracking wheelchair sports kinematics, compared with a 2D motion analysis (2DMA).
DOI: 10.15468/dl.znaztu
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Oxytheca perfoliata Torr. & A.Gray",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 144 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012971-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/d9h4xhvt32
title: The Housing Market Impacts of Bicycle-Sharing Systems

description: This dataset includes data files and codes for replicating the results in "The Housing Market Impacts of Bicycle-Sharing Systems" at Regional Science and Urban Economics by Yau-Huo (Jimmy) Shr, Feng-An Yang, and Yi-Syun Chen.
DOI: 10.17632/3yrx8xxccb
title: FDI drivers & machine learning

description: Balanced data of 66 developing countries is presented. The data includes explanatory variables to FDI inflows. We employ econometrics and machine learning to exploit the pattern of FDI drivers.
DOI: 10.17632/95mgdkrdzp
title: Bibliometric analysis on good governance against corruption: A dataset from (2015-2024)

description: This study focuses on analyzing research on good governance and corruption, utilizing a dataset of 2,537 documents extracted from the Scopus database. The analysis covers various aspects of the dataset, such as publication trends, citation patterns, keyword co-occurrence, bibliographic coupling, co-citation analysis, and collaborative networks among authors and countries. The goal is to gain a comprehensive understanding of the research landscape, including leading research areas, institutions, and countries contributing to the field. The study also explores thematic evolution and trends within the literature, providing insights into the development and current state of research on governance and corruption.
DOI: 10.17632/cb8t8np9z3
title: Sky Images and PV Power Measurements for Irradiance Forecasting

description: Ground-based sky images related to sunny, partially cloudy, and overcast sky conditions are available in this data set with corresponding power measurements that were obtained from two rooftop PV systems. The sky camera systems were made using Raspberry Pi mini-computers (3rd Generation Model B) and using programmable high-resolution Pi-Cameras with fisheye lenses. The sky camera systems were operated remotely and were programmed to automatically capture images from 8.00 am to 4.45 pm at a rate of 10 seconds and store them in JPEG format with a resolution of 1024x768 pixels. The RPI camera was assumed to have an equidistant mapping function. To collect the data, one camera was installed near a rooftop PV system (Location 1) at the Sustainable Buildings Research Centre (SBRC) at the Innovation Campus, University of Wollongong, Australia. The second camera was installed 1.9 km away (Location 2) from the first camera and it was installed at the roof of "Building 35" at the Main Campus of the University of Wollongong, Australia. Further corresponding PV power measurements were collected from Location 1 and Locations 3 ([34.41°N, 150.88°E] rooftop PV system at "Building 28", the main campus, University of Wollongong) which is 2 km away from camera 1 (Location 1 [34.40°N, 150.90°E]). Power measurements were acquired from both locations with a 1-minute resolution. Data sets obtained from camera 1 can be used for onsite PV forecasting, whereas using both data sets obtained from camera 1 and camera 2, PV forecasts for multiple PV sites can be derived via calculating cloud base heights.
DOI: 10.17632/jcng3638wx
title: The Competition Dynamics of Approach and Avoidance Motivations Following Interpersonal Transgression

description: This repository contains the data and code reported in the paper authored by Bo Shen, Yang Chen, Zhewen He, Weijian Li, Hongbo Yu, and Xiaolin Zhou "The Competition Dynamics of Approach and Avoidance Motivations Following Interpersonal Transgression".
In this study, we are interested in testing the approach-avoidance behavioral conflict in a transgressor after interpersonal harm.
The analyses were conducted using R and Matlab.
Data files: There are two data files, the binary choice dataset named "allsubjdat.RData" and the dataset combined with mouse trajectories named "allsubjmstrckdat.RData".
Codes:
DOI: 10.17632/nvdnrhf833
title: boreal_wetland_recovery_sentinel

description: These data were used to train and validate predictive models for the temporal change of four vegetation metrics. Metrics are expressed as a proportion of the associated Sentinel-2 cells. Proportions of jack pine, tamarack, and exposed herbaceous vegetation were derived from aerial field estimates. The height metric derives from a LiDAR CHM expressed as the maximum at 1 m resolution, then expressed as a proportion of the Sentinel-2 cell over 2 m in height. Spatial attributes have been removed, but training values extracted from Sentinel-2 bands and spectral indices are included ('Training Features'). Individual Sentinel-2 scenes used in the study are listed. The data dictionary provides additional details about each attribute.
DOI: 10.17632/bbmh79cwrt
title: Glycolysis-derived lactate induces ACSL4 expression and lactylation to activate ferroptosis during intervertebral disc degeneration

description: This is the single - cell sequencing data from the article titled "Glycolysis - derived lactate induces ACSL4 expression and lactylation to activate ferroptosis during intervertebral disc degeneration”
DOI: 10.6084/m9.figshare.12456623.v1
title: JARVIS-DFT Finite Difference Elastic Constants (JVASP-20261 to JVASP-22430)

description: Contains input/output files for finite difference method based elastic calculations in the JARVIS-DFT.
DOI: 10.6084/m9.figshare.19733449.v1
title: Metadata for 'evidence of co-limitation in global forest diversity gradients'

description: Metadata for the research paper entitled 'evidence of co-limitation in global forest diversity gradients'
DOI: 10.17632/zd56zx44h7
title: GPT-QUAL

description: The dataset contains three sheets:
Questionnaire: Includes the questions (potential items) of the scale.
Sample 411: Contains data collected from 411 participants.
GPT-Qual: Include the scale for perceived quality of the Chat-GPT.
DOI: 10.6084/m9.figshare.28039496.v1
title: <b>The genome annotation files for </b><b>the predatory flower bug </b><b><i>Orius strigicollis</i></b>

description: Predatory insects serve as important biological control agents in ecosystems by efficiently reducing pest populations. <i>Orius strigicollis</i> is a highly effective beneficial predator in cultivated fields in China. It is widely used as a biological control agent against many pests, including thrips, aphids, and spider mites. The lack of public availability of <i>O. strigicollis</i> genomes has limited our ability to thoroughly explore and research its evolution and gene function, particularly genes related to pesticide resistance.<i> </i>Here, we report a chromosome-scale assembly of the <i>O. strigicollis</i> genome by PacBio High fidelity (HiFi) long-reads, high-throughput chromosome conformation capture (Hi-C) and Illumina sequencing technologies. The final genome assembly was 167 Mb with a contig N50 size of 12.05 Mb, and 98.21% of the assembly was anchored to 12 chromosomes. Annotation identified 11,551 protein-coding genes. In this article, we reported a high-quality chromosome-scale assembly genome for the species of the genus <i>Orius</i> for the first time, which provide valuable resources for functional gene research and genetic transformation of natural enemy insects.
DOI: 10.17632/2pxd8wc64y
title: Rare earth element signatures of the Yarlung Zangbo basin aeolian sediments

description: Rare earth element (REE) characteristics of the mainstream and major tributaries in the Yarlung Zangbo River Basin