cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/7x8x4g3s44
title: Monopolar TURP catheterised vs non catheterised

description: Comparison of outcomes between those patients undergoing monopolar transurethral resection of prostate for symptomatic benign prostatic hyperplasia with Foley catheterization preoperatively after at least one failed trial without catheter and those with moderate to severe bothersome lower urinary tract symptoms requiring surgical intervention with no Foley catheter preoperatively. Patient’s age, body mass index (BMI), American Society of Anesthesiologists’ classification (ASA), prostate volume, IPP, prostate specific antigen level (PSA) level, uroflowmetry findings, post-void residual (PVR) volume, International Prostate Symptom Score (IPSS). The operating time was calculated as time from the introduction of resectoscope till the placement of Foley catheter. Proportion of prostate resected was calculated as the volume resected weighed at the end of operation divided by the preoperative ultrasound determined prostate volume. Post-operative hemoglobin level was assessed at 24hr. Change in hemoglobin level was derived by subtracting the postoperative hemoglobin level at 24 hours from the preoperative level. Complications were classified as per modified Clavien classification system. Data analysis was done using the Statistical Package for Social Sciences Windows version 23. Baseline characteristics were compared using the Chi-square test for categorical variables and the student t-test/ Mann Whitney U test for continuous data. Anova was used to compare groups with various duration of preoperative catheterization. A p-value &lt; 0.05 was considered statistically significant. Patient with preoperative catheterization had higher prostate volume, higher PSA level, higher volume of prostate resected, better postoperative subjective symptoms score and QOL score, longer duration of hospital stay and lower Qmax. T with similar complication rate. This data set can be used with SPSS software.
DOI: 10.17632/j8vp85b5cn
title:  Transmittance spectra above PVA-ppy sample at different heights from sample surface under 520 nm LED

description:  Transmittance spectra above PVA-ppy sample at different heights from sample surface under 520 nm LED
DOI: 10.17632/n882hp8f97
title: europe_air_cargo_counttry_data_2019_2020

description: origin destination data of european air cargo movements in 2019 and 2020
DOI: 10.17632/wfc7cwjnwd
title: Investigating the Writing Skills Alternative Assessment Strategies used in Moroccan ESP Classrooms: Teachers’ Perceptions and Prevailing Practices

description: Assessment is the backbone of the learning-teaching process. Several studies have proven that assessment goes hand in hand
with learning. Classroom assessment can be either traditionally of learning or formatively an ongoing process for learning. The
current study explores the writing skills alternative assessment strategies used by Moroccan English for Specific Purposes (ESP)
teachers in their classrooms. To reach this, the study seeks to explore Moroccan ESP practitioners’ perceptions and prevailing
practices of writing skills alternative assessment strategies. Similarly, the study tries to identify possible challenges that impede
the proper implementation of alternative assessment pedagogy in the Moroccan ESP context. Following a qualitative research
design, the current paper deploys semi-structured interviews to collect data from 10 ESP instructors working in different higher
institutes and universities in Morocco. The findings reveal that the participants possess favorable opinions regarding alternative
assessment methods of writing skills. Nevertheless, these optimistic viewpoints are not clearly reflected in their assessment
practices. The research paper can benefit both practitioners and policymakers in the field of education.
DOI: 10.17632/yhsbfxdkdr
title: Supplemental Materials 24.10.30

description: Supplemental materials for JDS
DOI: 10.17632/zf385knyfs
title: Air sampling metadata

description: The data describes the parameters noted during air sample collection for the analysis of SARS-CoV-2 nucleic acids in air
DOI: 10.17632/zjw625jj3w
title: Cathepsin S- Cystatin C data- PAD-polyvascular disease

description: Database of 90 peripheral arterial disease patients from Targu Mures, Romania, with measurements of Cathepsin S and Cystatin C
DOI: 10.17632/52886yjprk
title: Bayesian evidence for the neural dissociation between finger and hand imitation skills

description: Online data for Bayesian evidence for the neural dissociation between finger and hand imitation skills by Rosenzopf, Röhrig, Goldenberg & Karnath
DOI: 10.17632/rx9vd79fwp
title: Aerosols and tides in the martian tropics during southern hemisphere spring equinox from Mars Climate Sounder data

description: These data files were used in the analysis and figure production of the manuscript "Aerosols and tides in the martian tropics during southern hemisphere spring equinox from Mars Climate Sounder data", by L. J. Steele, A. Kleinböhl, D. M. Kass, and R. W. Zurek.
DOI: 10.17632/s82sc4mv34
title: Ultra-fine resolution of pre-saccadic attention in the fovea

description: This repository contains data associated with the paper "Ultra-fine resolution of pre-saccadic attention in the fovea".
DOI: 10.17632/svr9kvsngy
title: norven

description: The data presented herein relates to the article entitled "Effects of norfluoxetine and venlafaxine in zebrafish larvae: molecular data" by Rodrigues et al., submitted to Data In Brief. The file contains raw data corresponding to expression of several zebrafish genes related to mode of action of psychoactive compounds acting upon serotonergic or/and noradrenergic neurotransmission. Zebrafish embryos were exposed to concentrations of norfluoxetine (0.64 to 400 ng/L), venlafaxine (16 to 10000 ng/L) or their combination (3.2 ng/L norfluoxetine + 2000 ng/L venlafaxine) over 80 hpf (hours post-fertilisation). At the end of the exposure, larvae were collected for quantification of the expression of 34 genes. Gene expression was evaluated by qPCR (SYBRGreen). Details on exposure conditions, gene sequences, primers employed and assay conditions are provided in the submitted article. The work was supported by funding EU and FCT/UEFISCDI/FORMAS funding through project REWATER (ERA-NET Cofund WaterWorks2015, Water JPI) and by national funds through FCT (Portuguese Foundation for the Science and Technology) within the scope of UIDB/04423/2020 and UIDP/04423/2020. PR was supported by a PhD fellowship (SFRH/BD/134518/2017) from FCT.
DOI: 10.5281/zenodo.14849644
title: h5 matrix files from the paper: "Detecting chromosomal rearrangements in boars using Hi-C"

description: Hi-C contact matrices (h5 format) generated by HiCExplorer. The files contain the interactions of each locus in the genome with other loci.



Frozen_hic_matrix.h5: This file contains the contact matrices from a control boar blood sample that had been frozen and then thawed before being used to generate a Hi-C library.

Fresh_hic_matrix.h5: This file contains the contact matrices from a fresh control boar blood sample that was used to generate a Hi-C library.

RT_hic_matrix.h5: This file contains the contact matrices from a blood sample from a boar with an RT, that had been frozen and then thawed before being used to generate a Hi-C library.


ginteraction files:



Frozen_hic_matrix500kb_normalised_ICE_corrected_intermediate_threshold_chronly_matrix.ginteractions: This file contains the ginteractions from the frozen control. boar sample.

Fresh_hic_matrix500kb_normalised_ICE_corrected_intermediate_threshold_chronly_matrix.ginteractions: This file contains the ginteractions from the fresh control. boar sample.

RT_hic_matrix500kb_normalised_ICE_corrected_intermediate_threshold_chronly_matrix.ginteractions: This file contains the ginteractions from the frozen RT sample.
DOI: 10.5281/zenodo.14849645
title: h5 matrix files from the paper: "Detecting chromosomal rearrangements in boars using Hi-C"

description: Hi-C contact matrices (h5 format) generated by HiCExplorer. The files contain the interactions of each locus in the genome with other loci.



Frozen_hic_matrix.h5: This file contains the contact matrices from a control boar blood sample that had been frozen and then thawed before being used to generate a Hi-C library.

Fresh_hic_matrix.h5: This file contains the contact matrices from a fresh control boar blood sample that was used to generate a Hi-C library.

RT_hic_matrix.h5: This file contains the contact matrices from a blood sample from a boar with an RT, that had been frozen and then thawed before being used to generate a Hi-C library.


ginteraction files:



Frozen_hic_matrix500kb_normalised_ICE_corrected_intermediate_threshold_chronly_matrix.ginteractions: This file contains the ginteractions from the frozen control. boar sample.

Fresh_hic_matrix500kb_normalised_ICE_corrected_intermediate_threshold_chronly_matrix.ginteractions: This file contains the ginteractions from the fresh control. boar sample.

RT_hic_matrix500kb_normalised_ICE_corrected_intermediate_threshold_chronly_matrix.ginteractions: This file contains the ginteractions from the frozen RT sample.
DOI: 10.17632/5rvk9szwhj
title: Effect of Myricetin dataset

description: These data are useful to test and compare the biomechanical and biological effects of myricetin (MYR) with synthetic and natural cross-linker agents of collagen, on demineralized dentin. The dataset includes the solubilization of collagen by the concentration of hydroxyproline, the micro tensile strength, and elastic modulus after to subjected to MYR.  Additionally, some of the raw data of results obtained in Raman analysis (70 to 3500 cm-1) of mineralized dentin slabs, after being subjected to acid conditioning, and after dentin was exposed to test substances.
DOI: 10.17632/7dgch2pnhy
title: LINF_350019500

description: 60S ribosomal protein L2; Leishmania infantum
DOI: 10.17632/7w2cdsrt87
title: Agent-based models predict emergent behavior of heterogeneous cell populations in dynamic microenvironments: MODULE COMPLEXITY

description: Data and results for `MODULE COMPLEXITY` simulations. Simulations of population with different combinations of metabolism and signaling module complexities (random, simple, medium, and complex). Each condition is run for 15 days (21600 ticks) with 20 replicates (random seeds 0 - 19). Cells are introduced to the center of the constant source environment after a 1 day delay. Snapshots are taken every 0.5 days (720 ticks). The data folder contains .tar.xz compressed replicate sets. The results folder contains .pkl files of data parsed into arrays (only for the full model rule simulations). Simulations are labeled as: [case]_[metabolism]_[signaling] - [case] - simulations full model rules do not have this label - both = fixed state with both modules - metabolism = fixed state with only metabolism module - signaling = fixed state with only signaling module - [metabolism] - R = random metabolism module - S = simple metabolism module - M = medium metabolism module - C = complex metabolism module - [signaling] - R = random signaling module - S = simple signaling module - M = medium signaling module - C = complex signaling module
DOI: 10.17632/89xcnk5cjr
title: LDHU3_09.0330

description: ATP-dependent protease ATPase subunit HslU | HslU2
Leishmania donovani (HU3 strain)
DOI: 10.17632/8dn49kxpz5
title: ASR indigenous language Bribri

description: This dataset includes a Bribri language model (bribri_model.pt) for ASR inference, accompanied by a phoneme dictionary (dict.ltr.txt) and a lexicon (lexicon.txtB
DOI: 10.17632/9hb3yxp2b2
title: LDHU3_11.1470

description: ABCA2 | ATP-binding cassette protein subfamily A member 2; Leishmania donovani (HU3 strain)
DOI: 10.17632/9srwd22jy8
title: G&E Students publications May 2021- July 2022

description: 2022 G&E newsletter full publication list
DOI: 10.17632/dsf7s4tpjc
title: Therapy of allergic rhinitis using ribavirin spray to clear nasal commensal viruses

description: Much attention has focused on commensal bacteria in health and disease, but the role of commensal viruses is largely unexplored. Although commensal viruses are suggested in some organs such as intestine to maintain tissue homeostasis, it is unknown whether they participate in the physiology or pathology of nose, which directly contacts outer environment. Here, we focused on nasal commensal viruses in the development of allergic rhinitis (AR), a global health problem affecting 20% to 30% of the population, and found that clearance of nasal commensal viruses using ribavirin alleviated AR symptoms, suggesting that nasal commensal viruses promote AR development. Mechanistically, nasal commensal viruses, recognized by innate sensors, initiated the production of type I interferon, recruiting and generating a population of interferon-induced neutrophils in the nasal cavity, which released neutrophil extracellular traps (NETs) to promote AR. Most importantly, to verify whether clearing nasal commensal viruses could treat AR patients clinically, we performed a randomized, double-blind, placebo-controlled, phase 2 clinical trial (Chinese Clinical Trial Registry identifier: ChiCTR2400082642) to explore the efficacy and safety of ribavirin spray in treating AR patients, and found that the patients of ribavirin group experienced significantly alleviated symptoms as compared to the placebo group, determining the therapeutic efficacy of ribavirin spray. Thus, we suggest a new mechanism for AR and a new approach for treating AR patients.
DOI: 10.17632/khkj29tsbr
title: TasteCultArt

description: Contains four taste variables (sweet, sour, umami, and bitter) for the expected taste of four fruits (guava, apple, pineapple, and grape). Subjects respond to each taste question on a continuous line that ranges from none to strong.
DOI: 10.17632/nmzvwtk886
title: LINF_020005200

description: tagatose-6-phosphate kinase-like protein
DOI: 10.17632/tm2r68vfwm
title: Torques within and outside the human spindle balance twist at anaphase

description: Summary of the work: At each cell division, nanometer-scale motors and microtubules give rise to the micron-scale spindle. Many mitotic motors step helically around microtubules in vitro, and most are predicted to twist the spindle in a left-handed direction. However, the human spindle exhibits only slight global twist, raising the question of how these molecular torques are balanced. Here we find that anaphase spindles in the epithelial cell line MCF10A have high baseline twist, and we identify factors that both increase and decrease this twist. The midzone motors KIF4A and MKLP1 are together required for left-handed twist at anaphase, and we show that KIF4A generates left-handed torque in vitro. The actin cytoskeleton also contributes to left-handed twist, but dynein and its cortical recruitment factor LGN counteract it. Together, our work demonstrates that force generators regulate twist in opposite directions from both within and outside the spindle, preventing strong spindle twist during chromosome segregation.

Here we provide Microsoft Excel files containing the source data used to generate the plots in this paper.
DOI: 10.17632/vw32ttfgnr
title: Raw data on sheep follicular fluid proteomics

description: This data is related to a study to describe the proteins present in this fluid and correlate with the follicular development, basing the findings on small and large growing follicles.
The ovaries were collected in a slaughterhouse and transported to the laboratory to collect follicular fluid. For proteomic analysis, the follicular fluid was submitted to albumin depletion and then analyzed for protein concentration by the Bradford method for mass spectrometry.
DOI: 10.17632/w928dbh3pp
title: DATASET - JUDICIALIZAÇÃO DA COMPETIÇÃO ELEITORAL RJ -2012/2020

description: Esta base de dados foi compilada em pesquisa que pretende aferir o tamanho da judicialização da competição eleitoral no Estado do Rio de Janeiro. Foram agrupadas todas as ações judiciais movidas em face de candidatos eleitos para o cargo de Prefeito Municipal nas eleições de 2012, 2016 e 2020, nas quais a procedência do pedido resultaria na anulação do pleito. Em relação ao ciclo eleitoral de 2020, as ações foram compiladas até o início do recesso forense de dezembro.
DOI: 10.17632/zhj9vkk3rj
title: Supplementary table 1 for "A retrospective cohort study of hepatitis B reactivation in patients with autoimmune bullous diseases on immunosuppressive therapy in Singapore"

description: Supplementary table 1: Characteristics of patients in Groups 1 and 2.
DOI: 10.17632/6kmkjntgnp
title: Data for: Trace element composition of amphibole and petrogenesis of Cretaceous hornblendites and plutonic suites in the Fuegian Andes, southernmost South America

description: Raw data of amphibole geochemistry. Includes EMPA and LA-ICP-MS data from Patagonia.
DOI: 10.17632/6mrr5v39y8
title: Data for: An Experimental Study on Quartz Dissolution Kinetics in Water under Supercritical Geothermal Conditions

description: Raw data for all figures in the manuscript by Zhong et al to be published by Geochimica et Cosmochimica Acta as "An Experimental Study on Quartz Dissolution Kinetics in Water under Supercritical Geothermal Conditions"
DOI: 10.17632/72j9sz2j2x
title: NSUN2 mediated distinct pathways regulate enterovirus 71 replication

description: The file showed all original strips of western blot.
DOI: 10.17632/95ftczcnv7
title: Systemic profile of immune factors in an elderly Italian population affected by chronic strongyloidiasis

description: Background: Strongyloidiasis caused by Strongyloides stercoralis is a soil-transmitted helminthiasis affecting an estimated 370 million people and considered one of the most neglected tropical diseases. Although mostly distributed in tropical and subtropical areas, autochthonous infections have also been documented in northeastern Italy, even though the transmission presumably stopped decades ago. Because of its peculiar auto-infective cycle, strongyloidiasis can persist lifelong, but the pathophysiological mechanisms associated with the maintenance of such a chronic infection are yet to be fully deciphered. Methods: Serum levels of 23 immune factors were retrospectively assessed in a subgroup of participants in a randomised clinical trial for the treatment of strongyloidiasis (Strong Treat). Here we included Italian subjects born between 1931 and 1964 and diagnosed with strongyloidiasis between 2013 and 2017 (Ss+, n = 32). Serum samples obtained before (BT) and 6 months (6M AT) after ivermectin treatment, as well as from age- and gender-matched uninfected controls (CTRL, n = 34) were analysed. Results: The assessed immune factors showed a general reduced concertation in Ss+ patients and a lack of association with eosinophilia. In our cohort, we did not observe the classical shift towards a type 2 immune response, since Th1 and Th2 cytokines were mostly unaltered. Instead, we observed chemokines as particularly affected by the presence of the parasite, since IL-8, CCL3, CCL4 and CCL5 were significantly reduced in concentration in Ss+ subjects compared to CTRL, suggesting that immune cell recruitment to the infection site might be dampened in these patients. This observation was further sustained by a significant increase of CCL4, CCL5 and CCL11 concentrations 6M AT. A significant raised systemic concentration of three growth factors, bFGF, PDGF-BB and IL-7 (haematopoietic growth factor) was also observed post-treatment, indicating a potential involvement in restoring tissue integrity and homeostasis following parasite elimination. Conclusions: These preliminary data suggest that, in order to survive for such a long period, S. stercoralis might suppress host responses that could otherwise result in its ejection. Our results offer novel insights in the potential mechanisms of disease tolerance that might take place during this chronic infection, including a potential T-cell hypo-responsiveness and a role for chemokines.
DOI: 10.17632/bs9wdkj6fy
title: AVs_minority

description: the data contains two experiments
DOI: 10.17632/h6pgswr27h
title: HyPR-MS for multiplexed discovery of MALAT1, NEAT1, and NORAD lncRNA protein interactomes

description: This data set includes the mass spectrometric raw files for all capture, scrambled, and input samples used for the manuscript.
DOI: 10.17632/jk88r7xcwr
title: Supplemental Materials: Th17/IL-17-axis in paraneoplastic pemphigus/paraneoplastic autoimmune multiorgan syndrome as potential therapeutic targets: A prospective cohort study

description: Supplemental figure 1. Clinical manifestations of paraneoplastic pemphigus/paraneoplastic autoimmune multiorgan syndrome (PNP/PAMS), including: A. lichenoid dermatitis, B. blisters with erosions, C. oral erosions, D. vulvar erosions, E. ocular erosions, and F. penile erosions. 

Supplemental figure 2. Hematoxylin and eosin stain showed suprabasal acantholysis along with perivascular lymphocytic infiltrate with scattered neutrophils.

Supplemental figure 3. Direct immunofluorescence stains demonstrated positive immunostaining against immunoglobulin G and/or C3 depositions on intraepidermal spaces and/or dermo-epidermal junctions.

Supplemental figure 4. Enzyme-linked immunosorbent assay detecting autoantibodies against self-antigens within the plasma of patients with PNP/PAMS. BP, Bullous pemphigoid; DSG, Desmoglein.

Supplemental figure 5. Hierarchical cluster heatmap of Nanostring gene expression of patients with PNP/PAMS and healthy controls (HC).

Supplemental figure 6. A. Refractory painful mucosal erosions that require nasoduodenal tube placement for feeding; B. Healed erosions after anti-interleukin-17 receptor A (brodalumab) treatment for three weeks.

Supplemental figure 7. PNP/PAMS lesions before (A) and after (B) two doses of brodalumab treatment.

Supplemental Methods.
DOI: 10.17632/nd4s9z7jgk
title: LINF_230016200

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/s3h6gjktmp
title: Spike rate modulation of locus coeruleus neurons associated with visual spatial attention in monkeys

description: Spike rate modulation of locus coeruleus neurons associated with visual spatial attention in monkeys. We trained two rhesus monkeys to selectively attend one of two visual stimulus locations while performing a visual orientation change detection task. Once the animal fixated, two Gabor sample stimuli appeared for 200 ms, one in each hemifield. After a brief delay (200-300 ms), a Gabor test stimulus appeared in one of the locations. The monkey had to report whether the test stimulus had a different orientation than the sample that had appeared in that location by making a saccade to one of two colored saccade targets after the fixation spot went off. The locations of the saccade targets were interchanged randomly across trials. Spatially selective attention was controlled in blocks of trials by different reward sizes and by varying the test stimulus probability for the two locations. While the monkeys did the attention task, we recorded simultaneously from populations of LC neurons (monkey S, n = 229; monkey P, n = 185). Recorded neurons were classified as phasic responsive to visual stimulus (phasic, monkey S, n = 89/229; monkey P, n = 74/185), pre-stimulus fixation responsive (non-phasic, monkey S, n = 88/229; monkey P, n = 53/185) or saccade related (saccade, monkey S, n = 104/229; monkey P, n = 124/185).
DOI: 10.17632/sh3tkztmgp
title: Research Paper

description: Organizational Strategies for Real Estate Developers in a Post-COVID-19 Environment