cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8228468.v1
title: Additional file 4: of Extensive genome analysis of Coxiella burnetii reveals limited evolution within genomic groups

description: Data File S1. Raw data for in silico MST genotyping and pan-genome analyses. Data Sheets A) Strain Overview; B) In silico MST genotyping results; C) Gene Sequence Identity Scores; D) BPGA results _ all strains; E) BPGA results _ Genomic-Group-specific proteins; F) Scoary output _ pan-GWAS significant associations; G) snippy output_merged vcf file; H) ParSNP output _ vcf file; I) MST20_SNP_Matrix. (XLSX 12334 kb)
DOI: 10.6084/m9.figshare.8228390
title: Additional file 1: of Copy number determination of the gene for the human pancreatic polypeptide receptor NPY4R using read depth analysis and droplet digital PCR

description: NPY4R copy number in 1000 Genomes individuals. A table displaying IDs, population and the copy number of the NPY4R gene determined using read depth analysis (66 individuals from the 1000 Genomes database) and ddPCR (18 samples from the 1000 Genomes Project). (XLSX 14 kb)
DOI: 10.6084/m9.figshare.8228390.v1
title: Additional file 1: of Copy number determination of the gene for the human pancreatic polypeptide receptor NPY4R using read depth analysis and droplet digital PCR

description: NPY4R copy number in 1000 Genomes individuals. A table displaying IDs, population and the copy number of the NPY4R gene determined using read depth analysis (66 individuals from the 1000 Genomes database) and ddPCR (18 samples from the 1000 Genomes Project). (XLSX 14 kb)
DOI: 10.6084/m9.figshare.8228282
title: MOESM2 of Status of insecticide resistance in Anopheles gambiae (s.l.) of The Gambia

description: Additional file 2. Raw dataset of the WHO insecticide susceptibility tests carried out during the 2016 and 2017 malaria transmission seasons in The Gambia.
DOI: 10.6084/m9.figshare.8228282.v1
title: MOESM2 of Status of insecticide resistance in Anopheles gambiae (s.l.) of The Gambia

description: Additional file 2. Raw dataset of the WHO insecticide susceptibility tests carried out during the 2016 and 2017 malaria transmission seasons in The Gambia.
DOI: 10.25919/5f473485911aa
title: Wolbachia Establishment Risk - Model Simulations

description: This collection contains all data generated from the debugIIT population model (https://github.com/dpagendam/debugIIT) and used for the analyses presented in the paper: Modelling the Wolbachia Incompatible Insect Technique: strategies for effective mosquito population elimination. Authors: D.E. Pagendam, B.J. Trewin, N. Snoad, S.A. Ritchie, A.A. Hoffmann, K.M. Staunton, C. Paton, N. Beebe https://www.biorxiv.org/content/10.1101/2020.07.13.201483v1.full.pdf+html
DOI: 10.6084/m9.figshare.8228042
title: MOESM1 of Mutational landscape of gastric cancer and clinical application of genomic profiling based on target next-generation sequencing

description: Additional file 1. Gene list of BTC-PCPD panel.
DOI: 10.6084/m9.figshare.8228039
title: Additional file 7: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S6. Statistical summary of the results of searches for putative SNPs. (XLSX 8 kb)
DOI: 10.6084/m9.figshare.8228042.v1
title: MOESM1 of Mutational landscape of gastric cancer and clinical application of genomic profiling based on target next-generation sequencing

description: Additional file 1. Gene list of BTC-PCPD panel.
DOI: 10.6084/m9.figshare.8228039.v1
title: Additional file 7: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S6. Statistical summary of the results of searches for putative SNPs. (XLSX 8 kb)
DOI: 10.6084/m9.figshare.8228036
title: Additional file 6: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S5. Statistical summary of the results of searches for putative SSRs. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.8228027
title: Additional file 5: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S4. GO enrichment of the up- and downregulated genes in RRIM600 at each time point of the series. (XLS 96 kb)
DOI: 10.6084/m9.figshare.8228036.v1
title: Additional file 6: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S5. Statistical summary of the results of searches for putative SSRs. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.8228027.v1
title: Additional file 5: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S4. GO enrichment of the up- and downregulated genes in RRIM600 at each time point of the series. (XLS 96 kb)
DOI: 10.6084/m9.figshare.8228021
title: Additional file 4: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S3. Gene annotation of the DEGs identified for each time point in RRIM600 and GT1. (XLSX 470 kb)
DOI: 10.6084/m9.figshare.8228021.v1
title: Additional file 4: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S3. Gene annotation of the DEGs identified for each time point in RRIM600 and GT1. (XLSX 470 kb)
DOI: 10.6084/m9.figshare.8228009
title: Additional file 3: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S2. Gene annotation of the DEGs identified for each time point in RRIM600. (XLS 5420 kb)
DOI: 10.6084/m9.figshare.8228000
title: Additional file 2: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S1. qPCR primer sequences of the 20 amplified genes. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.8228009.v1
title: Additional file 3: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S2. Gene annotation of the DEGs identified for each time point in RRIM600. (XLS 5420 kb)
DOI: 10.6084/m9.figshare.8228000.v1
title: Additional file 2: of Deep expression analysis reveals distinct cold-response strategies in rubber tree (Hevea brasiliensis)

description: Table S1. qPCR primer sequences of the 20 amplified genes. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.8227988
title: Additional file 1: of Correlated levels of cerebrospinal fluid pathogenic proteins in drug-naïve Parkinson’s disease

description: All data used during this study. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.8227985
title: MOESM4 of Robust hematopoietic specification requires the ubiquitous Sp1 and Sp3 transcription factors

description: Additional file 4. Dataset 3 - scRNA-seq cell cluster markers
DOI: 10.6084/m9.figshare.8227988.v1
title: Additional file 1: of Correlated levels of cerebrospinal fluid pathogenic proteins in drug-naïve Parkinson’s disease

description: All data used during this study. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.8227985.v1
title: MOESM4 of Robust hematopoietic specification requires the ubiquitous Sp1 and Sp3 transcription factors

description: Additional file 4. Dataset 3 - scRNA-seq cell cluster markers
DOI: 10.6084/m9.figshare.8227979
title: MOESM3 of Robust hematopoietic specification requires the ubiquitous Sp1 and Sp3 transcription factors

description: Additional file 3. Dataset 2 - Grouping analysis of RNA-seq data and ChIP-seq data.
DOI: 10.6084/m9.figshare.8227976
title: MOESM2 of Robust hematopoietic specification requires the ubiquitous Sp1 and Sp3 transcription factors

description: Additional file 2. Dataset 1 - Covariance analysis of RNA-seq data.
DOI: 10.6084/m9.figshare.8227976.v1
title: MOESM2 of Robust hematopoietic specification requires the ubiquitous Sp1 and Sp3 transcription factors

description: Additional file 2. Dataset 1 - Covariance analysis of RNA-seq data.
DOI: 10.6084/m9.figshare.8227979.v1
title: MOESM3 of Robust hematopoietic specification requires the ubiquitous Sp1 and Sp3 transcription factors

description: Additional file 3. Dataset 2 - Grouping analysis of RNA-seq data and ChIP-seq data.
DOI: 10.6084/m9.figshare.8227916
title: Muzzammil Muhammad Ghana SGM Collated Responses.xlsx

description: Data from 2017 survey on opinions and experiences of health and abuse administered to 99 Sexual and Gender Minority Individuals in Accra.
DOI: 10.17608/k6.auckland.8227784
title: Global biogeography of marine amphipod crustaceans

description: Raw data of global biogeography of marine amphipod crustaceans<b><br></b><br>
DOI: 10.17608/k6.auckland.8227784.v1
title: Global biogeography of marine amphipod crustaceans

description: Raw data of global biogeography of marine amphipod crustaceans<b><br></b><br>
DOI: 10.6084/m9.figshare.8227661
title: A realistic approach to strategic thinking and acting

description: Abstract Coming from a split between thinking and acting, the trend of strategy as a practice seeks to connect micro/macro dimensions and link structure to agency. Due to this issue, it is argued that the trend may receive contributions from critical realism. Thus, this theoretical essay aims to establish a relation between thinking and acting in the field of research on strategy, by means of critical realism. Analyzing the reasons to separate schools, the first finding of this study was clarifying the use of discursive strategies in the field, obvious due to prioritization of moments when concepts of thinking and acting are used by each school. Moreover, a solenoid model was proposed, with cyclical connections among practice, practitioner, and praxis. However, besides the proposal, the strategy field may advance through a detailed view of structures/practices and agency/praxis, since the model has, at its core, the practitioner.
DOI: 10.6084/m9.figshare.8227658
title: Response of dual-purpose wheat to nitrogen fertilization and seed inoculation with Azospirillum brasilense

description: ABSTRACT The use of inoculants containing plant growth-promoting bacteria is an alternative to increase the efficiency of nitrogen fertilizers. Studies evaluating the effects of inoculation on forage yield, straw yield, and grain yield in dual-purpose wheat cultivars are scarce. This study aimed to evaluate the forage yield and grain yield in dual-purpose wheat inoculated with Azospirillum brasilense and fertilized with increasing nitrogen rates during two agricultural years (2016-2017) under cutting management. The trial was carried out in a completely randomized block design with four replicates, using a 2 x 4 factorial arrangement. The factors were the inoculation (control or A. brasilense) and nitrogen rates (0, 50, 100 and 150 kg ha-1 of N). Forage, grain and straw yield, and number of tillers were evaluated. Forage yield differed between treatments with inoculation and without inoculation, 3952 and 3350 kg DM ha-1, respectively. There was no effect of inoculation on grain yield. The forage and leaf biomass yield, the number of tillers and straw yield increased with inoculation.
DOI: 10.6084/m9.figshare.8227649
title: Integrated management systems as a driver for sustainability: the review and analysis of the literature and the proposition of the conceptual framework

description: Abstract Paper aims This paper aims to analyze the literature on standard management systems (ISO 14001, OHSAS 18001, SA 8000, and ISO 26000), and to propose a conceptual framework relating these standards to sustainability (based on TBL) to help answer the following research question: How does the literature address IMS and sustainability based on TBL? Originality This research sheds light on controversies, discussed in the literature, concerning the effects of IMS with sustainability standards. Research method The methodological approach used is a systematic literature review based on bibliometric theory and social network analysis. A conceptual model is presented, linking the main constructs, variables, and their relations to better understand the role of IMS as a driver for sustainability. Main findings Briefly, results show that more research is needed on the social dimension of Triple Bottom Line, especially in the standards OHSAS 18001, ISO 26000, and SA 8000. Moreover, there is a gap considering empirical data on relating IMS impact on performance. Implications for theory and practice This paper contributes by proposing a conceptual model, defining the variables and presenting four relational propositions among the key variables. In a future research agenda, this study could be applied to survey-based research to answer the research propositions suggested.
DOI: 10.6084/m9.figshare.8227652
title: Lake Guaíba: a historical and cultural analysis of water pollution in Porto Alegre, RS, Brazil

description: ABSTRACT The quality of life is intrinsically linked to water availability; however, pollution on this resource directly affects people. Lake Guaíba has a historical, economic and cultural importance to Porto Alegre (RS, Brazil) and its metropolitan region. This report discusses the historical and cultural context of Lake Guaíba’s pollution. With a large watershed, Lake Guaíba suffers many environmental impacts and, at the same time, has multiple uses for its waters. Despite the great importance of Lake Guaíba to Porto Alegre metropolitan region, there is a historical disregard with its quality. The lake is polluted and there is a public perception of this reality with direct limitation of its water’s use.
DOI: 10.6084/m9.figshare.8227655
title: Residual herbicides in Roundup Ready soybean: A case study in multiple years and locations with Ipomoea triloba

description: ABSTRACT The evolution of glyphosate-resistant and -tolerant weeds has caused changes in weed management around the world. Residual herbicides are crucial tools for weed management, but the rate of adoption by soybean growers remains very low in Brazil. In this research, we used glyphosate tolerant Ipomoea triloba as a model weed species to evaluate the advantages of using residual herbicides on soybeans in multiple years and locations of transition and Cerrado regions of Brazil, rather than relying only on post-emergence control. Most residual herbicides provided enough residual activity to allow a longer application window in post-emergence. Treatments with residual herbicides increased overall weed control, preventing weed interference and increasing soybean yield. When two residual herbicides were used as opposed to only one, a better I. triloba control was achieved, reflecting in higher crop yield, especially in conditions of high weed infestation. The use of pre-emergence herbicides allows growers to have a longer application window for the post-emergence treatment, which is particularly important in Brazilian Cerrado large fields when logistic could be an issue.
DOI: 10.6084/m9.figshare.8227658.v1
title: Response of dual-purpose wheat to nitrogen fertilization and seed inoculation with Azospirillum brasilense

description: ABSTRACT The use of inoculants containing plant growth-promoting bacteria is an alternative to increase the efficiency of nitrogen fertilizers. Studies evaluating the effects of inoculation on forage yield, straw yield, and grain yield in dual-purpose wheat cultivars are scarce. This study aimed to evaluate the forage yield and grain yield in dual-purpose wheat inoculated with Azospirillum brasilense and fertilized with increasing nitrogen rates during two agricultural years (2016-2017) under cutting management. The trial was carried out in a completely randomized block design with four replicates, using a 2 x 4 factorial arrangement. The factors were the inoculation (control or A. brasilense) and nitrogen rates (0, 50, 100 and 150 kg ha-1 of N). Forage, grain and straw yield, and number of tillers were evaluated. Forage yield differed between treatments with inoculation and without inoculation, 3952 and 3350 kg DM ha-1, respectively. There was no effect of inoculation on grain yield. The forage and leaf biomass yield, the number of tillers and straw yield increased with inoculation.
DOI: 10.6084/m9.figshare.8227661.v1
title: A realistic approach to strategic thinking and acting

description: Abstract Coming from a split between thinking and acting, the trend of strategy as a practice seeks to connect micro/macro dimensions and link structure to agency. Due to this issue, it is argued that the trend may receive contributions from critical realism. Thus, this theoretical essay aims to establish a relation between thinking and acting in the field of research on strategy, by means of critical realism. Analyzing the reasons to separate schools, the first finding of this study was clarifying the use of discursive strategies in the field, obvious due to prioritization of moments when concepts of thinking and acting are used by each school. Moreover, a solenoid model was proposed, with cyclical connections among practice, practitioner, and praxis. However, besides the proposal, the strategy field may advance through a detailed view of structures/practices and agency/praxis, since the model has, at its core, the practitioner.
DOI: 10.6084/m9.figshare.8227649.v1
title: Integrated management systems as a driver for sustainability: the review and analysis of the literature and the proposition of the conceptual framework

description: Abstract Paper aims This paper aims to analyze the literature on standard management systems (ISO 14001, OHSAS 18001, SA 8000, and ISO 26000), and to propose a conceptual framework relating these standards to sustainability (based on TBL) to help answer the following research question: How does the literature address IMS and sustainability based on TBL? Originality This research sheds light on controversies, discussed in the literature, concerning the effects of IMS with sustainability standards. Research method The methodological approach used is a systematic literature review based on bibliometric theory and social network analysis. A conceptual model is presented, linking the main constructs, variables, and their relations to better understand the role of IMS as a driver for sustainability. Main findings Briefly, results show that more research is needed on the social dimension of Triple Bottom Line, especially in the standards OHSAS 18001, ISO 26000, and SA 8000. Moreover, there is a gap considering empirical data on relating IMS impact on performance. Implications for theory and practice This paper contributes by proposing a conceptual model, defining the variables and presenting four relational propositions among the key variables. In a future research agenda, this study could be applied to survey-based research to answer the research propositions suggested.
DOI: 10.6084/m9.figshare.8227652.v1
title: Lake Guaíba: a historical and cultural analysis of water pollution in Porto Alegre, RS, Brazil

description: ABSTRACT The quality of life is intrinsically linked to water availability; however, pollution on this resource directly affects people. Lake Guaíba has a historical, economic and cultural importance to Porto Alegre (RS, Brazil) and its metropolitan region. This report discusses the historical and cultural context of Lake Guaíba’s pollution. With a large watershed, Lake Guaíba suffers many environmental impacts and, at the same time, has multiple uses for its waters. Despite the great importance of Lake Guaíba to Porto Alegre metropolitan region, there is a historical disregard with its quality. The lake is polluted and there is a public perception of this reality with direct limitation of its water’s use.
DOI: 10.6084/m9.figshare.8227655.v1
title: Residual herbicides in Roundup Ready soybean: A case study in multiple years and locations with Ipomoea triloba

description: ABSTRACT The evolution of glyphosate-resistant and -tolerant weeds has caused changes in weed management around the world. Residual herbicides are crucial tools for weed management, but the rate of adoption by soybean growers remains very low in Brazil. In this research, we used glyphosate tolerant Ipomoea triloba as a model weed species to evaluate the advantages of using residual herbicides on soybeans in multiple years and locations of transition and Cerrado regions of Brazil, rather than relying only on post-emergence control. Most residual herbicides provided enough residual activity to allow a longer application window in post-emergence. Treatments with residual herbicides increased overall weed control, preventing weed interference and increasing soybean yield. When two residual herbicides were used as opposed to only one, a better I. triloba control was achieved, reflecting in higher crop yield, especially in conditions of high weed infestation. The use of pre-emergence herbicides allows growers to have a longer application window for the post-emergence treatment, which is particularly important in Brazilian Cerrado large fields when logistic could be an issue.
DOI: 10.6084/m9.figshare.8227640
title: Influence of Abutment Collar Height and Implant Length on Stress Distribution in Single Crowns

description: Abstract This in silico study evaluated the influence of the abutment collar height and implants length on the biomechanical behavior of morse taper single dental implants with different crown-to-implant ratio. Six virtual models were constructed (S11, M11, L11, S13, M13 and L13) by combining short (S: 2.5 mm), medium (M: 3.5 mm) or long (L: 4.5 mm) abutment collar heights with different implant lengths (11 or 13-mm). An upper central incisor of 11-mm height was constructed on top of each abutment. Each set was positioned in a virtual bone model and exported to analyze mathematically. A 0.60-mm mesh was created after convergence analysis and a 49 N load was applied to the cingulum of the crown at an angle of 45°. Load-generated stress distribution was analyzed in the prosthetic components according to von Mises stress criteria (σvM) and in the cortical and cancellous bone by means of shear stress (εmax). The use of longer collar abutments (L11) increased the stress on the abutment by 250% and resulted in 40% higher stresses on the screw and 92% higher cortical shear stresses compared to short collared abutments (S11). Increasing the implant length produced a slight stress reduction on cortical bone. Cancellous bone was not affected by the crown-to-implant ratio. Longer abutment collars concentrate stresses at the implant level and cortical bone by increasing the crown-to-implant ratio.
DOI: 10.6084/m9.figshare.8227643
title: Patency of Individual and Sequential Coronary Artery Bypass in Patients with Ischemic Heart Disease: A Meta-analysis

description: Abstract Objective: To evaluate the patency of individual and sequential coronary artery bypass in patients with ischemic heart disease. Methods: We searched PubMed, Cochrane Library, Excerpta Medica Database, and ClinicalTrials.gov databases for controlled trials. Endpoints included graft patency, anastomosis patency, occluded rates in left anterior descending (LAD) system and right coronary artery (RCA) system, in-hospital mortality, and follow-up mortality. Pooled risk ratios (RRs) and standardized mean difference (SMD) were used to assess the relative data. Results: Nine cohorts, including 7100 patients and 1440 grafts under individual or sequential coronary artery bypass. There were no significant differences between individual and sequential coronary artery bypass in the graft patency (RR=0.96; 95% CI=0.91-1.02; P=0.16; I2=87%), anastomosis patency (RR=0.95; 95% CI=0.91-1.00; P=0.05; I2=70%), occluded rate in LAD system (RR=1.03; 95% CI=0.92-1.16; P=0.58; I2=37%), occluded rate in RCA system (RR=1.36; 95% CI=0.72-2.57; P=0.35; I2=95%), in-hospital mortality (RR=1.57; 95% CI=0.92-2.69; P=0.10; I2=0%), and follow-up mortality (RR=0.96; 95% CI=0.36-2.53; P=0.93; I2=0%). Conclusion: No significant differences on clinical data were observed regarding anastomosis patency, occluded rate in LAD system, occluded rate in RCA system, in-hospital mortality, and follow-up mortality, indicating that the patency of individual and the patency of sequential coronary artery bypass are similar to each other.