cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4779123
title: Benchmark Dataset for designing and developing the National Edition of Aldo Moro's works

description: The dataset collects a series of values associated with a sample of 30 digital editions, and based on some evaluation criteria for reviewing scholarly digital editions compiled by Patrick Sahle in collaboration with Georg Voegler and IDE (Institut für Dokumentologie und Editorik) members (Sahle 2014). In particular, the aspects that have been taken into consideration during the evaluation process are the following: <code>Documentation</code> (<em>Documentation</em>, <em>Scholarly objectives</em>, <em>Mission</em> focusing on the objectives, <em>Documentation and associated texts</em>); <code>Audience</code> (<em>Mission</em>, focusing on the audience); <code>Representation</code> (<em>Representation of documents and texts</em>); <code>Data model</code> (<em>Data modelling</em>); <code>Browse</code>; <code>Search</code>; <code>Indices</code>; <code>Quality of the presentation</code>; <code>Metadata</code> (<em>Metadata for description of and interlinkage between objects in the edition</em>); <code>Identification</code> (<em>Identification and citation</em>); <code>Formats</code> (<em>Spin offs and export formats</em>); <code>OS-OA</code> (<em>Access to basic data</em>, <em>Rights and licences</em>); <code>Additional features</code>; Each aspect (except for <code>Audience</code> and <code>Data model</code>) has been given a score between <code>0</code>, <code>0.5</code>, and <code>1</code>, where: <code>0</code> represents a value that witnesses either the total absence or the lack of quality of the edition in terms of that specific aspect; <code>0.5</code> represents a value that witnesses a suboptimal implementation of that specific aspect in the edition; <code>1</code> represents a value that witnesses an optimal implementation of that specific aspect in the edition.
DOI: 10.5281/zenodo.4779122
title: Benchmark Dataset for designing and developing the National Edition of Aldo Moro's works

description: The dataset collects a series of values associated with a sample of 30 digital editions, and based on some evaluation criteria for reviewing scholarly digital editions compiled by Patrick Sahle in collaboration with Georg Voegler and IDE (Institut für Dokumentologie und Editorik) members (Sahle 2014). In particular, the aspects that have been taken into consideration during the evaluation process are the following: <code>Documentation</code> (<em>Documentation</em>, <em>Scholarly objectives</em>, <em>Mission</em> focusing on the objectives, <em>Documentation and associated texts</em>); <code>Audience</code> (<em>Mission</em>, focusing on the audience); <code>Representation</code> (<em>Representation of documents and texts</em>); <code>Data model</code> (<em>Data modelling</em>); <code>Browse</code>; <code>Search</code>; <code>Indices</code>; <code>Quality of the presentation</code>; <code>Metadata</code> (<em>Metadata for description of and interlinkage between objects in the edition</em>); <code>Identification</code> (<em>Identification and citation</em>); <code>Formats</code> (<em>Spin offs and export formats</em>); <code>OS-OA</code> (<em>Access to basic data</em>, <em>Rights and licences</em>); <code>Additional features</code>; Each aspect (except for <code>Audience</code> and <code>Data model</code>) has been given a score between <code>0</code>, <code>0.5</code>, and <code>1</code>, where: <code>0</code> represents a value that witnesses either the total absence or the lack of quality of the edition in terms of that specific aspect; <code>0.5</code> represents a value that witnesses a suboptimal implementation of that specific aspect in the edition; <code>1</code> represents a value that witnesses an optimal implementation of that specific aspect in the edition.
DOI: 10.6073/pasta/165f189ab3af6c37ad9b587177cec4ea
title: Landscape Position Project at North Temperate Lakes LTER: Aquatic Macrophytesn 1998 - 1999

description: Submersed and floating macrophytes were surveyed along transects running perpendicular to shore at two sites representative of muck (organic) and sand substrate macrophyte communities. Data were collected by Karen A. Wilson as part of her PhD work in Northern Wisconsin, (Vilas and Onieda Counties) during July and August of 1998 and 1999. Details of field collections can be found in Wilson, K.A. 2002. Impacts of the invasive rusty crayfish (Orconectes rusticus) in northern Wisconsin lakes. Ph.D. Dissertation. University of Wisconsin, Madison. Number of sites: 30 lakes; 2 sites per lake
DOI: 10.5281/zenodo.4318714
title: Pangenomics reveals alternative environmental lifestyles among chlamydiae

description: Chlamydiae are highly successful strictly intracellular bacteria associated with diverse eukaryotic hosts. Here we analysed metagenome-assembled genomes of the “Genomes from Earth’s Microbiomes” initiative from diverse environmental samples, which almost double the known phylogenetic diversity of the phylum. Our data and analyses provide an extended perspective of the variability of chlamydial biology and the ecology of this phylum of intracellular microbes.
DOI: 10.5281/zenodo.4318713
title: Pangenomics reveals alternative environmental lifestyles among chlamydiae

description: Chlamydiae are highly successful strictly intracellular bacteria associated with diverse eukaryotic hosts. Here we analysed metagenome-assembled genomes of the “Genomes from Earth’s Microbiomes” initiative from diverse environmental samples, which almost double the known phylogenetic diversity of the phylum. Our data and analyses provide an extended perspective of the variability of chlamydial biology and the ecology of this phylum of intracellular microbes.
DOI: 10.6073/pasta/b569123d4b10d0861842e5eed9ce8118
title: Data from NEGATIVE EFFECTS OF NITROGEN OVERRIDE POSITIVE EFFECTS OF PHOSPHORUS ON GRASSLAND LEGUMES WORLDWIDE

description: Anthropogenic nutrient enrichment is driving global biodiversity decline and modifying ecosystem functions. Theory suggests that plant functional types that fix atmospheric nitrogen have a competitive advantage in nitrogen-poor soils, but lose this advantage with increasing nitrogen supply. By contrast, addition of phosphorus, potassium and other nutrients may benefit such species in low nutrient environments by enhancing their nitrogen-fixing capacity. We present the first global-scale experiment confirming these predictions for nitrogen-fixing legumes (Fabaceae) across 45 grasslands on six continents. Nitrogen addition reduced legume cover, richness, and biomass particularly in nitrogen-poor soils while cover of non-nitrogen-fixing plants increased. Addition of phosphorous, potassium, and other nutrients enhanced legume abundance but did not mitigate the negative effects of nitrogen addition. Increasing nitrogen-supply thus has potential to decrease the diversity and abundance of grassland legumes worldwide regardless of the availability of other nutrients, with consequences for biodiversity, food webs, ecosystem resilience and genetic improvement of protein-rich agricultural plant species.
DOI: 10.25500/edata.bham.00000658
title: Research data supporting the publication "Liquid extraction surface analysis mass spectrometry of ESKAPE pathogens"
DOI: 10.6084/m9.figshare.13456355.v1
title: JERICHO-E-usage dataset

description: The JERICHO-E-usage dataset. The dataset includes time series of useful energy consumption patterns for energy system modeling. The time series data covers 38 NUTS2 regions in germany and has an hourly resolution. The dataset distinguished between four sectors - the residential, the industrial, the commerce, and the mobility sectors. Useful energy types comprise space heating, warm water, process heating, space cooling, process cooling, mechanical energy, information and communication technology, and lighting.
DOI: 10.6084/m9.figshare.13456355
title: JERICHO-E-usage dataset

description: The JERICHO-E-usage dataset. The dataset includes time series of useful energy consumption patterns for energy system modeling. The time series data covers 38 NUTS2 regions in germany and has an hourly resolution. The dataset distinguished between four sectors - the residential, the industrial, the commerce, and the mobility sectors. Useful energy types comprise space heating, warm water, process heating, space cooling, process cooling, mechanical energy, information and communication technology, and lighting.
DOI: 10.6084/m9.figshare.13456361
title: JERICHO-E-usage code

description: Python code for compiling the JERICHO-E-usage dataset. A Jupyter Notebook with further instructions on the workflow is included.
DOI: 10.6084/m9.figshare.13456361.v1
title: JERICHO-E-usage code

description: Python code for compiling the JERICHO-E-usage dataset. A Jupyter Notebook with further instructions on the workflow is included.
DOI: 10.3886/e140641
title: Women at Work in the United States Since 1860: An Analysis of Unreported Family Workers

description: This study uses microdata from IPUMS USA, available from the Minnesota Population Center, University of Minnesota. Samples used for this study are: 1860 1% sample, 1920 1% sample, and 2015-2019 ACS 5-year sample. This deposit includes the codebooks used for the data samples (data can be accessed at https://usa.ipums.org/usa/index.shtml), as well as the description of the additional variables created from the microdata samples used in this study.<br>
DOI: 10.3886/e140641v1
title: Women at Work in the United States Since 1860: An Analysis of Unreported Family Workers

description: This study uses microdata from IPUMS USA, available from the Minnesota Population Center, University of Minnesota. Samples used for this study are: 1860 1% sample, 1920 1% sample, and 2015-2019 ACS 5-year sample. This deposit includes the codebooks used for the data samples (data can be accessed at https://usa.ipums.org/usa/index.shtml), as well as the description of the additional variables created from the microdata samples used in this study.<br>
DOI: 10.6073/pasta/06b0ad82b20a2491cc1f390f69465bdd
title: Lake Metabolism at North Temperate Lakes LTER 2000

description: Recent literature suggests that for many lakes and rivers, the respiratory breakdown of organic matter (R) exceeds production of organic matter by photosynthesis (gross primary production; GPP) within the water body. This metabolic balance (GPP less than R; heterotrophy ) implies that allochthonous organic matter supports a portion of the aquatic ecosystems respiration. Evidence that many lakes are heterotrophic comes from diverse approaches, and debate remains over the circumstances in which heterotrophy exists. The methods used to estimate GPP and R and the limited extent of lake types studied, especially with respect to dissolved organic carbon (DOC) and total phosphorus (TP) concentrations, are two reasons for differing conclusions. In this study, O2 and CO2 sondes were deployed during July and August, 2000 to measure diel gas dynamics in the surface waters of 25 lakes in the Northern Highland Lake district of Wisconsin and the Upper Peninsula of Michigan. The lakes were chosen to span wide and orthogonal ranges in DOC and TP concentrations. From these data, we calculated GPP, R and net ecosystem production (NEP=GPP-R). Over the broad range in TP and DOC among the lakes, diel CO2 and O2 changed on a near 1:1 molar ratio. Metabolism estimates from the two gases were comparable, except at high pH. Most lakes in our data set had -NEP, but GPP and R appeared to be controlled by different factors. TP correlated strongly with GPP, whereas DOC correlated with R. At low DOC concentrations, GPP and R were nearly equal, but at higher DOC, GPP and R uncoupled and lakes had -NEP. Strong correlations between lake metabolism and landscape related variables suggest that allochthonous carbon influences lake metabolism. Sampling Frequency: Chemical parameters and physical properties sampled from 1 to 4 times during the summer. Time series data step is 30 minutes. Number of sites: Time series data for 25 lakes. Chemical and physical data from 31 lakes.
DOI: 10.34740/kaggle/dsv/2257000
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.14639412
title: Erythrocystisfinal.contigskmer71.fa

description: This file contains the contigs that were generated <i>de novo</i> in MEGAHIT using 12,251,113 single-end reads with kmers set to 71-150. The data are part of the results for the manuscript "Transfer of the marine red alga <i>Erythrocystis saccata </i>(Rhodomelaceae, Rhodophyta) to the tribe Streblocladieae inferred from organellar genome analysis."
DOI: 10.6084/m9.figshare.14639412.v1
title: Erythrocystisfinal.contigskmer71.fa

description: This file contains the contigs that were generated <i>de novo</i> in MEGAHIT using 12,251,113 single-end reads with kmers set to 71-150. The data are part of the results for the manuscript "Transfer of the marine red alga <i>Erythrocystis saccata </i>(Rhodomelaceae, Rhodophyta) to the tribe Streblocladieae inferred from organellar genome analysis."
DOI: 10.6073/pasta/7ee716007f574b76a28c31e12c941bc0
title: North Temperate Lakes LTER: Residential Lakeshore Property Sales in Vilas County 1997 - 2004

description: Sales of residential shoreline property parcels in Vilas County, WI, USA for the period January 1997 througt Dec 2004. This dataset includes sales of over 2000 parcels on 234 lakes. In addtion to the sale price, other information collected include assessed value of the land, assessed value of improvements, length of lake frontage and total size of the parcel.
DOI: 10.5281/zenodo.4775266
title: Resveratrol-elicited Sirt1 phosphorylation by LKB1 guides mitochondrial metabolism

description: The NAD<sup>+</sup>-dependent deacetylase Sirt1 is implicated in the prevention of many age-related diseases such as cancer, type 2 diabetes, and cardiovascular disease. Resveratrol, a plant polyphenol, exhibits anti-aging, anti-tumor and vascular protection effects by activating Sirt1. However, the molecular mechanism of Sirt1 activation induced by resveratrol remains unclear. Here, we identify the tumor suppressor LKB1 as a direct activator of Sirt1 elicited by resveratrol. Resveratrol promotes the binding between LKB1 and Sirt1, which elicits LKB1 phosphorylation of Sirt1 at three different serine residues in the C-terminus. Mechanistically, LKB1-mediated phosphorylation increases the intramolecular interaction of Sirt1, that the binding of C-terminus to deacetylase core domain, thereby eliminating DBC1 inhibition and promoting Sirt1-substrate interaction. Functionally, LKB1-dependent Sirt1 activation increases mitochondrial biogenesis and respiration through deacetylation and activation of co-activator PGC-1a. These results uncover Sirt1 as a context-dependent target of LKB1 and suggest that resveratrol-stimulated LKB1-Sirt1 pathway plays a vital role in mitochondrial metabolism.
DOI: 10.5281/zenodo.4775265
title: Resveratrol-elicited Sirt1 phosphorylation by LKB1 guides mitochondrial metabolism

description: The NAD<sup>+</sup>-dependent deacetylase Sirt1 is implicated in the prevention of many age-related diseases such as cancer, type 2 diabetes, and cardiovascular disease. Resveratrol, a plant polyphenol, exhibits anti-aging, anti-tumor and vascular protection effects by activating Sirt1. However, the molecular mechanism of Sirt1 activation induced by resveratrol remains unclear. Here, we identify the tumor suppressor LKB1 as a direct activator of Sirt1 elicited by resveratrol. Resveratrol promotes the binding between LKB1 and Sirt1, which elicits LKB1 phosphorylation of Sirt1 at three different serine residues in the C-terminus. Mechanistically, LKB1-mediated phosphorylation increases the intramolecular interaction of Sirt1, that the binding of C-terminus to deacetylase core domain, thereby eliminating DBC1 inhibition and promoting Sirt1-substrate interaction. Functionally, LKB1-dependent Sirt1 activation increases mitochondrial biogenesis and respiration through deacetylation and activation of co-activator PGC-1a. These results uncover Sirt1 as a context-dependent target of LKB1 and suggest that resveratrol-stimulated LKB1-Sirt1 pathway plays a vital role in mitochondrial metabolism.
DOI: 10.7284/131380
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise EN611 using a Hawaii UHDAS instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131384
title: Anemometer data collected during research cruise EN611 using a RM Young 05103 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131385
title: Anemometer data collected during research cruise EN611 using a RM Young 05103 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131381
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise EN611 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131379
title: Expendable Probe data collected during research cruise EN611 using a Sippican MK21 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131378
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN611 using a Ashtech ADU2 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131390
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN611 using a Northstar 952 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131391
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN611 using a Furuno GP-33 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131393
title: GNSS (Global Navigation Satellite System) data collected during research cruise EN611 using a Ashtech ADU5 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131382
title: Gyrocompass data collected during research cruise EN611 using a Sperry MK-37 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131383
title: Gyrocompass data collected during research cruise EN611 using a Sperry MK-37 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131389
title: Meteorological Station data collected during research cruise EN611 using a RM Young 26800 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131386
title: Radiometer data collected during research cruise EN611 using a Eppley RAD instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131387
title: Radiometer data collected during research cruise EN611 using a Eppley RAD instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131395
title: Singlebeam Echosounder data collected during research cruise EN611 using a Knudsen 320B/R instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131392
title: Speedlog data collected during research cruise EN611 using a Furuno DS-50 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131394
title: Timeserver data collected during research cruise EN611 using a Spectracom SecureSync instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.5286/isis.e.rb2010152-3
title: Plant Antimicrobial Protein Interactions with Self-Assembled Floating Membrane Models of Plant and Bacterial Membranes

description: Previously (RB1910140) we developed free floating model plant and pathogen membranes where complex unsaturated lipid mixtures and sterols which can be self-assembled adjacent to anionic PEGylated thiol self-assembling monolayers (SAM). Here, we will examine the interaction of plant defence protein purothionin, under physiologically accurate conditions using this sample system. Furthermore, we will examine whether this novel sample system has any particular issues relating to this kind of interaction studies and how the disruption of the floating bilayer affects the system behaviour. For our study we will generate four different membranes – two plant plasma membrane models of different complexity in their lipid composition and two bacterial models. The distribution of purothionin across each membrane, as well as the position and condition of each membrane itself will be elucidated.
DOI: 10.7284/131388
title: TSG (Thermosalinograph) data collected during research cruise EN611 using a Sea-Bird SBE-45 instrument system onboard the platform RV Endeavor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.15139/s3/h8v8qa
title: Data for Empirical relationships among wind conditions and ozone exceedances in Houston and other cities in Texas

description: In the Houston-Galveston-Beaumont (HGB) region considerable scientific effort has been directed at elucidating the relationships among atmospheric circulations and urban mixed-layer ozone concentrations. These studies of the HGB region have provided guidance on the meteorological conditions that are used herein to identify specific meteorological metrics with a significant correlation with observed exceedances of the National Ambient Air Quality Standard for ozone. These metrics were developed using 15 years of ozone concentrations and localized wind conditions enhanced by the incorporation of a private monitoring network. Using this data several key metrics were found that described the most common meteorological conditions for an exceedance day. The most highly correlated parameters included: the wind direction at midnight, wind speeds from 0-6 LST, and the extent of wind direction rotation in a 24-hour period. It was found that throughout the observational period the strength of these correlations remained relatively stable through the years. These metrics, and the meteorological conditions they describe, are influenced through large scale synoptic forces described here and supported with observational data from across the state of Texas. These metrics can be used in support of regulatory model performance evaluations to assure accuracy in predicting ozone conducive conditions necessary for developing effective mitigation