cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.9jh21/2
title: Dissection data of control workers in Experiment2

description: This is the raw data of dissections performed on control groups of workers in Experiment2. Definition of column headings:
-	Group no.: identification number of the 3-worker groups
-	Collection time: workers were collected sequentially in three time steps (15, 30 and 60 days after group establishment)
-	Colony no.: identification number of the mother colonies
-	Treatment: social treatment applied to the workers (F+ or F-)
-	Worker no.: identification number of the workers
-	Focal/Non-focal: type of worker within the group (focal or non-focal)
-	Mean oocyte: mean length of all eight terminal oocytes (mm)
-	Body size: length of the radial cell in a forewing (mm)
DOI: 10.5061/dryad.9jh21/4
title: Longevity data of Experiment2

description: This is the raw data for workers used in the longevity experiment in Experiment2. Definition of column headings:
-	Group no.: identification number of the 3-worker groups
-	Colony no.: identification number of the mother colonies
-	Treatment: social treatment applied to the workers (F+ or F-)
-	Worker no.: identification number of the workers
-	Focal/Non-focal: type of worker within the group (focal or non-focal)
-	Eclosion date: eclosion date of the workers
-	Pre-starting date: date at which the non-focal workers in treatment F- were grouped in the plastic boxes
-	Starting date: date at which 3-worker groups were formed
-	Death date: date at which workers died
-	Longevity: age of the workers at death in days
-	Mean oocyte: mean length of all eight terminal oocytes (mm)
-	Longest oocyte: length of the longest visible oocyte (mm)
-	Body size: length of the radial cell in a forewing (mm)
DOI: 10.5061/dryad.9jh21/5
title: Reproduction data of Experiment2

description: This is the raw data of the egg-laying behaviours observed in Experiment2. There are two excel sheets: “Number of scans” described the number of scans performed on workers during the interval between the first and last observed instances of egg-laying; “Worker egg-laying” described the egg-laying observations and the detailed statistical procedure used to compare the egg-laying activities. Column headings are self-explanatory.
DOI: 10.5061/dryad.bg15b/1
title: Angertetal_AmNat_HabitatSuitabilityOccupancy_Dryad

description: Presence and presence/absence records used for distribution model building and hypothesis testing. Please see README for details.
DOI: 10.5061/dryad.c553k/1
title: Odonata occurrence, pond environmental data and location

description: Sheet one: Odonate occurrence by location and date matrix. Sheet two: Environmental data for ponds. Sheet three: Pond locations by latitude and longitude.
DOI: 10.5061/dryad.g4n5q/6
title: RESIGHTING_ALL

description: Datafile containing all resightings of harriers
DOI: 10.5061/dryad.g4n5q/7
title: unicapt

description: Datafile with selection of a single resighting per individual per year
DOI: 10.5061/dryad.h4p2b/4
title: Metabolomic data_Polar phase

description: Metabolic results non-polar phase compounds of plant esxtracts, as measured with MALI-TOF.
DOI: 10.5061/dryad.j4g98/3
title: Differentially expressed genes

description: Each spread sheet contains the list of differentially expressed genes (FDR &lt;5%) at each time point and concentration.
DOI: 10.5061/dryad.j4g98/4
title: Common genes

description: This is the list of genes that are common to both 0.3 nM and 1.2 nM PCB126 exposed adult whole brain samples.
DOI: 10.5061/dryad.j4g98/5
title: KEGG and Geno Ontology Pathway analysis of upregulated genes in the brain

description: This file contains the list of genes that are represented under each enriched GO and KEGG pathway terms. These genes are differentially expressed in the adult brain samples exposed to either 0.3nM or 1.2nM PCB126.
DOI: 10.5061/dryad.j4g98/6
title: KEGG and Gene Ontology Pathway analysis of the downregulated genes in the brain

description: This file contains the list of genes associated with each enriched KEGG and GO terms in the whole brain samples of 0.3nM and 1.2nM PCB126 exposed adult fish. These GO and KEGG terms are enriched in the downregulated gene set.
DOI: 10.5061/dryad.nd951/1
title: Overall number of bird territories and species as well as per nesting guild, foraging guild and sensitivity

description: Number of bird territories (Individuals) and bird species (Species) found in our 12 plots over the two years. Most continuous variables were scaled (mean=0, SD=1), this is indicated by (.z) at the end of the column heading "name.z".The Shannon_index refers to the tree species' which we found in our plots.
DOI: 10.5061/dryad.p6q3s/1
title: 61 haplotypes cytb 702 bases in phylip format

description: Phylip file listing 61 haplotypes of partial reads of the mtDNA cytochrome b gene used in Walter et al., The first 22 haplotypes originally published in Murray et al. (2008 - Mar Biol): H1-H22. Eight haplotypes reported in Hussey et al. (2015 - Polar Biol): H28 H38 H41 H43 H46, H48, H50, H53. all other recovered as novel sequences in Walter et al.
DOI: 10.5061/dryad.p7c77/1
title: Dsim_3reps_F0F60_majorChr_downsampled

description: Sync file of allele coverage for Drosophila simulans SNPs in major chromosome arms (X, 2L, 2R, 3L, 3R). Columns in this sync file correspond to chromosome, position, base, Dsim_A_F0, Dsim_B_F0, Dsim_C_F0, Dsim_A_F60_Hot, Dsim_B_F60_Hot, Dsim_C_F60_Hot. Nomenclature of the samples is as follows: e.g. species_replicate_generation_selection regime. Species: Dsim (Drosophila simulans), replicate: letters (A-Z), generation: F#, # indicating the number of generations, and selection regime: Hot. Format specification of sync file is described in Kofler et al., PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq).
 Bioinformatics 2011;27:3435-3436. See main publication for additional information about data processing, SNP calling and filtering.
DOI: 10.5061/dryad.pd40m/1
title: Muscle Spindle Afferent Stretch Recordings from Blum et al. 2017
DOI: 10.5061/dryad.pt07g/1
title: Selection on skewed characters - Simulations Scripts and Results

description: Simulations scripts and results for both cases of skewness in environmental effects and skewness in breeding values distribution, and scripts used for generate the figure 1 and S1.
DOI: 10.5061/dryad.rf7g5.1/31.1
title: Breinholt_et_al_DS6

description: Dataset 6 (shallow_flanks). Nexus file containing 749 loci and 35 taxa. The Extract_probe_region.py script was used on Dataset 4 to isolate data coming from the flanking regions region. See taxa_list.txt for species names of each taxon, this is a nucleotide nexus file with a CHARSET that defines each gene. For further information see Breinholt et al. (2017) and Breinholt_et_al_Supplementary_File_1_S1-S11.xlsx in this Dryad package for more details.
DOI: 10.5061/dryad.rf7g5.1/32.1
title: Breinholt_et_al_DS5

description: Dataset 5 (shallow_probe). Nexus file containing 749 loci and 48 taxa. The Extract_probe_region.py script was used on Dataset 4 to isolate data coming from the probe region. See taxa_list.txt for species names of each taxon, this is a nucleotide nexus file with a CHARSET that defines each gene. For further information see Breinholt et al. (2017) and Breinholt_et_al_Supplementary_File_1_S1-S11.xlsx in this Dryad package for more details.
DOI: 10.5061/dryad.rf7g5.1/33.1
title: Breinholt_et_al_DS4

description: Dataset 4 (shallow_probe+flanks). Nexus file containing 749 loci and 48 taxa. Alignments were trimmed with a density of 60% and entropy of 1.5 using alignment_DE_trim.py and flacking regions were processed with the flank_dropper.py to remove head or tail sequences using 2 standard deviations for both the head and tail. See taxa_list.txt for species names of each taxon, this is a nucleotide nexus file with a CHARSET that defines each gene. For further information see Breinholt et al. (2017) and Breinholt_et_al_Supplementary_File_1_S1-S11.xlsx in this Dryad package for more details.
DOI: 10.5061/dryad.rf7g5.1/35.1
title: Breinholt_et_al_aminoacid_DS2

description: Nexus file containing amino acid data for 557 loci and 75 taxa. See taxa_list.txt for species names of each taxon, this is an amino acid nexus file with a CHARSET that defines each loci. Loci names correspond to Loci numbers in the Lep1 enrichment kit included in this DRAYD package. For further information see Breinholt et al. (2017) and Breinholt_et_al_Supplementary_File_1_S1-S11.xlsx in this Dryad package for more details.
DOI: 10.5061/dryad.rk37b/1
title: Biochar_dilution_exp_plantbiomass_nematodes_and_protozoa

description: This excel file contains data from an experiment started July 2011. A paper describing the conclusions from the data is published in Soil Biology and Biochemistry.
Basically three times autoclaved soil from Mossel (Ede, NL) is inoculated with soil inoculum or a suspension. The inoculum comes from the Biochar experiment, from treatments control and Biochar600, 6 blocks for each
Soil inoculum is applied in 3 densities: 10% live inoculum, 1% and 0,1 % with a total volume of 600 g fw soil/pot
Suspensions are made in similar densities, but sieved over 45 um and thus should only contain microbes
Non-inoculated control pots are added (6 replicates per block, 36 in total)
This dataset contains data from 3 consequtive experiments, presented in one worksheet
Dry weight of the soil at the start of the experiment is presented in a separate worksheet
DOI: 10.5061/dryad.10gm6/2
title: retention of fungal growth on unpreserved prey of Cerceris arenaria and C. sabulosa

description: Retention time of fungal growth on untreated prey items (Coleopteran prey from Cerceris arenaria, Hymenopteran prey from C. sabulosa), values in days scored by three different helpers.
DOI: 10.5061/dryad.10gm6/3
title: potential prey preservation by Cerceris bupresticida

description: Wasp characteristic CHC substances of Cerceris bupresticida females, as well as fresh prey and potentially preserved prey from C. bupresticida nests
DOI: 10.5061/dryad.10gm6/4
title: potential prey preservation by Cerceris rubida

description: Wasp characteristic CHC substances of Cerceris rubida females, as well as fresh prey and potentially preserved prey from C. rubida nests
DOI: 10.5061/dryad.10gm6/5
title: potential prey preservation by Cerceris stratiotes

description: Wasp characteristic CHC substances of Cerceris stratiotes females, as well as fresh prey and potentially preserved prey from C. stratiotes nests
DOI: 10.5061/dryad.10gm6/6
title: potential prey preservation by Cerceris sabulosa

description: Wasp characteristic CHC substances of Cerceris sabulosa females, as well as fresh prey and potentially preserved prey from C. sabulosa nests
DOI: 10.5061/dryad.10gm6/7
title: potential prey preservation by Cerceris arenaria

description: Wasp characteristic CHC substances of Cerceris arenaria females, as well as fresh prey and potentially preserved prey from C. arenaria nests
DOI: 10.5061/dryad.13250/1
title: data_teacher_adherence
DOI: 10.5061/dryad.14mt7/1
title: NZ-Sea-Lion_Enderby_GPS_locations-2001-03

description: This is an excel file that contains daily GPS locations of breeding branded New Zealand sea lion females that were obtained manually at the breeding aggregation on Enderby Island over the breeding period (Dec-March) for 2 years (for more details on methodology see Augé et al. 2009 DOI: 10.1163/15683909X427687). Tag is the brand number. Lat and Long are in NZGD2000.
DOI: 10.5061/dryad.19fg1/1
title: Caspase 8 expression data

description: Procaspase 8 ELISA results of FDA-approved drug screen.
DOI: 10.5061/dryad.19sq4/1
title: Discosoma Images

description: Unprocessed chlorophyll emission images at different excitation wavelengths in Discosoma.
DOI: 10.5061/dryad.19sq4/2
title: Suspension Images

description: Unprocessed chlorophyll emission images at different excitation wavelengths in zooxanthellae suspension.
DOI: 10.5061/dryad.19sq4/3
title: ILM for Dryad

description: Raw data used to produce figures in the manuscript.
DOI: 10.5061/dryad.1g3r5/1
title: bat passes per transect per night

description: File contains (only valid nights included) number of bat passes per night per transect. For detailed information on the setup of the experiment, please see Spoelstra et al. 2015, Experimental illumination of natural habitat—an experimental set-up to assess the direct and indirect ecological consequences of artificial light of different spectral composition. nightNR=night number, with first night January 1, 2012; yearperiod=June/July(1), August/September(2); lightonoff=experimental light on (1) or off (0).
DOI: 10.5061/dryad.1rr57/1
title: Motion and force data

description: MATLAB data file (.MAT) with experimental data for Joiner et al 2017
DOI: 10.5061/dryad.2ht78/1
title: Tuser et al - data

description: These data were resource data for figures in the manuscript. They include both background data from the field and data which arised after proccesing of acoustical data in Sonar5 software (see methodical chapter of the ms).
DOI: 10.5061/dryad.3j6rr/1
title: Data file_FUNCTIONALITY, BALANCE AND STRATEGY
DOI: 10.5061/dryad.486g4/1
title: populationSizes_gen12_CompletePlants

description: Population sizes after 12 generations evolving on tomato plants under different treatments (dispersal/competition). Population sizes was measured as the number of adult females on the experimental complete tomato plants (before removing epigenetic effects).
DOI: 10.5061/dryad.486g4/2
title: populationSizes_gen8_CompletePlants

description: Population sizes of T. urticae after 8 generations evolving on tomato plants under different treatments of competition and dispersal. population sizes are measured as number of adult females.
DOI: 10.5061/dryad.486g4/3
title: fecundity-Longevity_data_gen20

description: fecundity (number of eggs at day 6) and longevity (number of days females were alive) for females during the fitness tests after 20 generation evolving on tomato. Females were placed on detached bean and tomato leaves for 1 generation. Before the fitness test females were place on common garden (detached bean leaves) for 2 generations to remove juvenile and maternal effects. Dispersal treatments have 4 levels: 1 = 2mites/week, 2 = 3mites/week, 3 = 5mites/week, 4=10mites/week. Fecundity data for females that died of non-natural causes (drowned or disappeared) was excluded from the analysis (NA).
DOI: 10.5061/dryad.486g4/4
title: fecundity-longevity_data_gen8

description: Fecundity (day 6) and longevity data for mites after 8 generations evolving on tomato plants. Data from the fitness test after removing juvenile and maternal effects. Females were placed individually on detached tomato and bean leaves for one generation. Dispersal treatments have 4 levels: 1 = 2mites/week, 2 = 3mites/week, 3 = 5mites/week, 4=10mites/week. Fecundity data for females that died of non-natural causes (drowned or disappeared) was excluded from the analysis (NA).
DOI: 10.5061/dryad.486g4/5
title: fecundity_longevity_data_g&gt;100

description: Fecundity (day 6) and longevity data on detached tomato and bean leaves (fitness test) after removal of juvenile and maternal effects. We used T. urticae females from the stock population (ST - a population reared on bean plants) and from a population that has been adapted to tomato (same strain as the stock population - London strain) for more than 100 generations (STa-reared on tomato plants, but originally coming from bean plants). Fecundity data for females that died of non-natural causes (drowned or disappeared) was excluded from the analysis (NA).
DOI: 10.5061/dryad.52v62/10
title: Cfol.cosii.hits

description: Identified COSII hits for Castilleja tenuis in fasta format.
DOI: 10.5061/dryad.52v62/11
title: Ccus.ppr.hits

description: Identified PPR hits for Castilleja cusickii in fasta format.
DOI: 10.5061/dryad.52v62/12
title: Ccus.cosii.hits

description: Identified COSII hits for Castilleja tenuis in fasta format.
DOI: 10.5061/dryad.52v62/8
title: Cten.cosii.hits

description: Identified COSII hits for Castilleja tenuis in fasta format.
DOI: 10.5061/dryad.52v62/9
title: Cfol.ppr.hits

description: Identified PPR hits for Castilleja foliolosa in fasta format.
DOI: 10.5061/dryad.55bp8/12
title: mapped_pv_all_sources_2006

description: The potential vorticity calculated from the vertical gradient of the neutral density (ie. PV = f/rho_0 d(gamma)/dz) for the year 2006 (with annual and semi-annual harmonics) from 75S to 30S.
DOI: 10.5061/dryad.55bp8/13
title: mapped_pv_all_sources_2007

description: The potential vorticity calculated from the vertical gradient of the neutral density (ie. PV = f/rho_0 d(gamma)/dz) for the year 2007 (with annual and semi-annual harmonics) from 75S to 30S.
DOI: 10.5061/dryad.55bp8/14
title: mapped_pv_all_sources_2008

description: The potential vorticity calculated from the vertical gradient of the neutral density (ie. PV = f/rho_0 d(gamma)/dz) for the year 2008 (with annual and semi-annual harmonics) from 75S to 30S.
DOI: 10.5061/dryad.55bp8/15
title: mapped_pv_all_sources_2009.nc

description: The potential vorticity calculated from the vertical gradient of the neutral density (ie. PV = f/rho_0 d(gamma)/dz) for the year 2009 (with annual and semi-annual harmonics) from 75S to 30S.
DOI: 10.5061/dryad.55bp8/16
title: mapped_pv_all_sources_2010

description: The potential vorticity calculated from the vertical gradient of the neutral density (ie. PV = f/rho_0 d(gamma)/dz) for the year 2010 (with annual and semi-annual harmonics) from 75S to 30S.
DOI: 10.5061/dryad.55bp8/17
title: mapped_pv_all_sources_2011

description: The potential vorticity calculated from the vertical gradient of the neutral density (ie. PV = f/rho_0 d(gamma)/dz) for the year 2011 (with annual and semi-annual harmonics) from 75S to 30S.
DOI: 10.5061/dryad.55bp8/18
title: mapped_pv_all_sources_2012

description: The potential vorticity calculated from the vertical gradient of the neutral density (ie. PV = f/rho_0 d(gamma)/dz) for the year 2012 (with annual and semi-annual harmonics) from 75S to 30S.
DOI: 10.5061/dryad.55bp8/19
title: mapped_pv_all_sources_2013

description: The potential vorticity calculated from the vertical gradient of the neutral density (ie. PV = f/rho_0 d(gamma)/dz) for the year 2013 (with annual and semi-annual harmonics) from 75S to 30S.
DOI: 10.5061/dryad.55bp8/21
title: mapped_streamfunction_abs_all_sources_2006

description: The absolute geostrophic streamfunction on depth surfaces for the year 2006 (including annual and semi-annual harmonics), caluculated using the TEOS-10 routine gsw_geo_strf_dyn_height (McDougall & Barker 2011).
DOI: 10.5061/dryad.55bp8/9
title: mapped_gamma_all_sources_2013

description: Neutral Density (Jackett &  McDougall, 1997) for the year 2013 (with annual and semi-annual harmonics) from 75S to 30S.
DOI: 10.5061/dryad.58c8v/1
title: nest level data

description: Data at the level of wasp nests
DOI: 10.5061/dryad.58c8v/2
title: wasp level data

description: Data at the level of individual wasps
DOI: 10.5061/dryad.5d5b3/1
title: Information on Anopheles nili samples sequenced from Cameroon
DOI: 10.5061/dryad.5n481/5
title: Fig.6-Cluster 4-video of 3d
DOI: 10.5061/dryad.5n481/6
title: Fig.7-Cluster 5-video of 3d
DOI: 10.5061/dryad.5n481/7
title: Fig.8-Cluster 6-video of 3d
DOI: 10.5061/dryad.6f8f0/1
title: Multivariate classifier performance: moving dot field stimuli

description: Multivariate classifier performance (proportion correct) when discriminating moving dot field stimuli (varying in direction and speed) based on multi electrode recordings from marmoset area MT.  All data is stored in Matlab data (.mat) files that were created with Matlab 2013a.
DOI: 10.5061/dryad.6f8f0/2
title: Spike counts: moving dot field stimuli

description: Spike counts for each electrode from marmoset area MT recorded while the anaesthetised animal was shown moving dot field stimuli. All data is stored in Matlab data (.mat) files that were created with Matlab 2013a.
DOI: 10.5061/dryad.6f8f0/3
title: Multivariate classifier performance: moving grating stimuli

description: Multivariate classifier performance (proportion correct) when discriminating moving grating stimuli (varying in direction and speed) based on multi electrode recordings from marmoset area MT.  All data is stored in Matlab data (.mat) files that were created with Matlab 2013a.
DOI: 10.5061/dryad.6vs80/1
title: Dataset for Economic Burden and HRQoL of HFMD
DOI: 10.5061/dryad.73kc6/4
title: mt_POWSIM

description: Text file used as input for POWSIM forward-time simulations with mtDNA. 
The file is based on cytochrome b haplotypic frequencies in 7 Adriatic-Ionian populations (Santa Caterina di Nardò, Brindisi, Manfredonia, Lesina, Ancona, Mljet, Miramare), obtained from Maltagliati et al. (2010, Biological Journal of the Linnean Society, 100, 910–923. Rename the file to POWSIM.IN to run POWSIM.
DOI: 10.5061/dryad.77k64/3
title: Ensifer_genus_snps

description: VCF file containing common SNPs of species Ensifer meliloti and Ensifer medicae
DOI: 10.5061/dryad.77k64/4
title: Mlupulina_snps

description: VCF file containing SNPs from the species Medicago lupulina
DOI: 10.5061/dryad.77k64/5
title: Nucleotide_diversity

description: Python script for calculating nucleotide diversity values from a VCF file
DOI: 10.5061/dryad.7g877/1
title: GPC alignment for evolutionary analyses
DOI: 10.5061/dryad.7g877/2
title: NP alignment for evolutionary analyses.
DOI: 10.5061/dryad.7g877/3
title: L alignment for evolutionary analyses.
DOI: 10.5061/dryad.7g877/4
title: GPC, NP and L trees for evolutionary analyses.
DOI: 10.5061/dryad.7nt8f/1
title: RNAseq_1
DOI: 10.5061/dryad.7nt8f/2
title: RNAseq_2
DOI: 10.5061/dryad.7nt8f/3
title: RNAseq_3
DOI: 10.5061/dryad.7nt8f/4
title: RNAseq_4
DOI: 10.5061/dryad.7nt8f/5
title: RNAseq_5
DOI: 10.5061/dryad.7nt8f/6
title: RNAseq_6
DOI: 10.5061/dryad.9d2n3/1
title: SchaefferHemlockFunEcolData

description: Data on exotic herbivore impacts on eastern hemlock root functional traits.
DOI: 10.5061/dryad.9dc21/1
title: Estimated vulnerability and risk of impacts

description: Data table that contains species name, the estimated vulnerability index and risk of impact index under the RCP 8.5 scenario.
DOI: 10.5061/dryad.bp20p/1
title: JEXBIO_154948

description: Spreadsheets containing raw data files for Regan and Richards (2016)
DOI: 10.5061/dryad.ff574/1
title: Seedling emergence and survival_Loranger2017

description: Emergence and survival_Loranger2017.csv = Comma-delimited CSV. Emergence of tree seedlings from seeds and subsequent survival through the first growing season at alpine treeline elevation in the French Alps. Seeds were sown in autumn 2013 and emergence and survival/mortality were registered weekly throughout the growing season in 2014.
Date = date of monitoring
FreeDays = number of days after snowmelt
Block = experimental block
Treat = treatments: C = Control = bare-ground plots; Sh = shading = covered by shade roofs; V = full vegetation, V2 = intermediate vegetation.
Species: Lar = Larix decidua; Pic = Picea abies; Sor = Sorbus aucuparia; Pinc = Pinus cembra; Pinu = Pinus uncinata
Row = row in plot
Sown = number of seeds sown
Dead = number of dead seedlings
Alive = number of surviving seedlings
Germ_All = number of germinated seedlings (including subsequently dead ones)