cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1619654.v3
title: The importance of isomorphism for conclusions about homology: A Bayesian multilevel structural equation modeling approach with ordinal indicators

description: Supplementary files. Guenole, N. (in review). The importance of isomorphism for conclusions about homology. A bayesian multilevel structural equation modeling approach with ordinal indicators. Description: Van de Schoot et al. (2015) observed that variance parameters estimated with Bayesian methods can be subject to spikes (i.e., extreme estimates) especially for variance terms, which inflate parameter estimates. To permit readers to evaluate whether this occurred in the current Monte Carlo study this file contains trace plots for the within and between latent variance and latent residual variance parameters for a sample run from each of the 384 cells in the design. Each file is numbered according to the design cell represents and contains a panel plot of four figures a) within latent variance, b) within latent residual variance, c) between latent variance, and d) between latent residual variance. References Van de Schoot, R., Broere, J.J., Perryck, K., Zondervan-Zwijnenburg, M., & Van Loey, N. (2015). Analyzing Small Data Sets using Bayesian Estimation: The case of posttraumatic stress symptoms following mechanical ventilation in burn survivors. European Journal of Psychotraumatology, 6: 25216 - http://dx.doi.org/10.3402/ejpt.v6.25216
DOI: 10.6084/m9.figshare.1619681.v4
title: Training response inhibition to reduce food consumption: Mechanisms, stimulus specificity and appropriate training protocols

description: Data associated with: Adams, R. C., Lawrence, N. S., Verbruggen, F., & Chambers, C. D. Training response inhibition to reduce food consumption: Mechanisms, stimulus specificity and appropriate training protocols.
DOI: 10.6084/m9.figshare.1619681.v3
title: Training response inhibition to reduce food consumption: Mechanisms, stimulus specificity and appropriate training protocols

description: Data associated with: Adams, R. C., Lawrence, N. S., Verbruggen, F., & Chambers, C. D. Training response inhibition to reduce food consumption: Mechanisms, stimulus specificity and appropriate training protocols.
DOI: 10.6084/m9.figshare.1619654.v2
title: The importance of isomorphism for conclusions about homology: A Bayesian multilevel structural equation modeling approach with ordinal indicators

description: Supplementary files. v2. Adds excel table of MC results v1. Guenole, N. (in review). The importance of isomorphism for conclusions about homology. A bayesian multilevel structural equation modeling approach with ordinal indicators. Description: Van de Schoot et al. (2015) observed that variance parameters estimated with Bayesian methods can be subject to spikes (i.e., extreme estimates) especially for variance terms, which inflate parameter estimates. To permit readers to evaluate whether this occurred in the current Monte Carlo study this file contains trace plots for the within and between latent variance and latent residual variance parameters for a sample run from each of the 384 cells in the design. Each file is numbered according to the design cell represents and contains a panel plot of four figures a) within latent variance, b) within latent residual variance, c) between latent variance, and d) between latent residual variance. References Van de Schoot, R., Broere, J.J., Perryck, K., Zondervan-Zwijnenburg, M., & Van Loey, N. (2015). Analyzing Small Data Sets using Bayesian Estimation: The case of posttraumatic stress symptoms following mechanical ventilation in burn survivors. European Journal of Psychotraumatology, 6: 25216 - http://dx.doi.org/10.3402/ejpt.v6.25216
DOI: 10.6084/m9.figshare.1619641
title: EEG-fNIRS hybrid SMR BCI data S9-S15

description: The dataset contains raw EEG and fNIRS recordings for motor execution of Right-Arm, Left-Arm, Right-Hand, and Left-Hand tasks. All information on the data can be foud in DataOrganization.txt.
DOI: 10.6084/m9.figshare.1619638
title: Report_Nr1

description: http://www.google.com/trends/explore#q=%2Fm%2F0fdjtq%2C%20Apache%20SOLR%2C%20%2Fm%2F04f32m3%2C%20%2Fm%2F05z_r2n%2C%20Neo4J&date=1%2F2010%2048m&cmpt=q
DOI: 10.6084/m9.figshare.1619639
title: Dataset and Image Inventory

description: This is the figure and dataset inventory for the article: <strong>The detection of emerging trends using Wikipedia traffic data and context networks</strong>
DOI: 10.6084/m9.figshare.1619640
title: EEG-fNIRShybrid SMR BCI data S1-S8

description: The dataset contains raw EEG and fNIRS recordings for motoThe dataset contains raw EEG and fNIRS recordings for motor execution of Right-Arm, Left-Arm, Right-Hand, and Left-Hand tasks. All information on the data can be foud in DataOrganization.txt.
DOI: 10.6084/m9.figshare.1619636
title: Report_Nr3

description: http://www.google.com/trends/explore#q=%2Fm%2F0fdjtq%2C%20Apache%20Mahout%2C%20Apache%20Solr%2C%20Apache%20Lucene%2C%20Apache%20Zookeeper&cmpt=q&tz=Etc%2FGMT-1
DOI: 10.6084/m9.figshare.1619637
title: Report_Nr2

description: http://www.google.com/trends/explore#q=Hadoop%2C%20Mahout%2C%20Solr%2C%20Lucene%2C%20Zookeeper&cmpt=q
DOI: 10.6084/m9.figshare.1619637.v1
title: Report_Nr2

description: http://www.google.com/trends/explore#q=Hadoop%2C%20Mahout%2C%20Solr%2C%20Lucene%2C%20Zookeeper&cmpt=q
DOI: 10.6084/m9.figshare.1619638.v1
title: Report_Nr1

description: http://www.google.com/trends/explore#q=%2Fm%2F0fdjtq%2C%20Apache%20SOLR%2C%20%2Fm%2F04f32m3%2C%20%2Fm%2F05z_r2n%2C%20Neo4J&date=1%2F2010%2048m&cmpt=q
DOI: 10.6084/m9.figshare.1619636.v1
title: Report_Nr3

description: http://www.google.com/trends/explore#q=%2Fm%2F0fdjtq%2C%20Apache%20Mahout%2C%20Apache%20Solr%2C%20Apache%20Lucene%2C%20Apache%20Zookeeper&cmpt=q&tz=Etc%2FGMT-1
DOI: 10.6084/m9.figshare.1618851
title: CERN@school: Background Radiation Measurements sample data set

description: This dataset contains copies of the original data used in the background radiation measurement experiment reported in "<em>CERN@school: demonstrating physics with the Timepix detector</em>" [1]. The data were recorded with a CERN@school MX-10 particle camera (B06-W0212) and a CERN@school Mk1 detector (E09-W0092). Please see [1] for more details of the experimental methods used. [1] T. Whyntie et al. "<em>CERN@school: demonstrating physics with the Timepix detector</em>", Contemporary Physics, DOI: 10.1080/00107514.2015.1045193 (2015)<i>CERN@school was supported by the UK Science and Technology Facilities Council (STFC) via grant numbers ST/J000256/1 and ST/N00101X/1, as well as a Special Award from the Royal Commission for the Exhibition of 1851.</i>
DOI: 10.6084/m9.figshare.1618847
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 4 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 4 raw data
DOI: 10.6084/m9.figshare.1619639.v1
title: Image Inventory

description: This is the figure and data inventory for the article: <strong>The detection of emerging trends using Wikipedia traffic data and context networks</strong>
DOI: 10.6084/m9.figshare.1618851.v2
title: CERN@school: Background Radiation Measurements sample data set

description: This dataset contains copies of the original data used in the background radiation measurement experiment reported in "<em>CERN@school: demonstrating physics with the Timepix detector</em>" [1]. The data were recorded with a CERN@school MX-10 particle camera (B06-W0212) and a CERN@school Mk1 detector (E09-W0092). Please see [1] for more details of the experimental methods used. [1] T. Whyntie et al. "<em>CERN@school: demonstrating physics with the Timepix detector</em>", Contemporary Physics, DOI: 10.1080/00107514.2015.1045193 (2015)<i>CERN@school was supported by the UK Science and Technology Facilities Council (STFC) via grant numbers ST/J000256/1 and ST/N00101X/1, as well as a Special Award from the Royal Commission for the Exhibition of 1851.</i>
DOI: 10.6084/m9.figshare.1618846
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 2 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 2 raw data
DOI: 10.6084/m9.figshare.1618851.v1
title: CERN@school: Background Radiation Measurements sample data set

description: This dataset contains copies of the original data used in the background radiation measurement experiment reported in "<em>CERN@school: demonstrating physics with the Timepix detector</em>" [1]. The data were recorded with a CERN@school MX-10 particle camera (B06-W0212) and a CERN@school Mk1 detector (E09-W0092). Please see [1] for more details of the experimental methods used. [1] T. Whyntie et al. "<em>CERN@school: demonstrating physics with the Timepix detector</em>", Contemporary Physics, DOI: 10.1080/00107514.2015.1045193 (2015)
DOI: 10.6084/m9.figshare.1618845
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 3 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 3 raw data
DOI: 10.6084/m9.figshare.1619639.v2
title: Image Inventory

description: This is the figure and data inventory for the article: <strong>The detection of emerging trends using Wikipedia traffic data and context networks</strong>
DOI: 10.6084/m9.figshare.1618847.v1
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 3 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 3 raw data
DOI: 10.6084/m9.figshare.1618845.v2
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 3 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 3 raw data
DOI: 10.6084/m9.figshare.1618846.v2
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 2 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 2 raw data
DOI: 10.6084/m9.figshare.1619639.v3
title: Dataset and Image Inventory

description: This is the figure and data inventory for the article: <strong>The detection of emerging trends using Wikipedia traffic data and context networks</strong>
DOI: 10.6084/m9.figshare.1618845.v1
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 1 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 1 raw data
DOI: 10.6084/m9.figshare.1618846.v1
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 2 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 2 raw data
DOI: 10.6084/m9.figshare.1618847.v2
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 4 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 4 raw data
DOI: 10.6084/m9.figshare.1618847.v4
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 4 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 4 raw data
DOI: 10.6084/m9.figshare.1619639.v4
title: Dataset and Image Inventory

description: This is the figure and dataset inventory for the article: <strong>The detection of emerging trends using Wikipedia traffic data and context networks</strong>
DOI: 10.6084/m9.figshare.1618847.v3
title: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 4 raw data

description: Open source approaches to establishing Roseobacter clade bacteria as synthetic biology chassis for biogeoengineering. Fig 4 raw data
DOI: 10.6084/m9.figshare.1618823
title: N-polar Visualization: A Radial Layout with Multiple Interactive Anchors (PacificVis 2015)

description: In this paper, we propose N-polar Visualization, an interactive visualization technique to graphically represent how the data objects are related against multiple anchors. This technique allows the user to assign a particular set of data objects as anchors and radially move them around of a circle. This enables the user to control the arrangement of the anchors and interactively perform multiple comparisons of the data set. To test the utility of this technique, a case study was performed using N-polar Visualization of UN General Assembly voting data, and the underlying insights were compared with the actual historical events.
DOI: 10.6084/m9.figshare.1618824
title: Mapping Visual Attributes of Logos: A Case Study of Parallel Coordinate Plots (EuroVis 2015)

description: This paper uses visualization technique on graphical features of logos as a different way to approach creating or studying logo designs. We gathered 720 logos from the website, logolounge.com, and identified 9 features and 55 feature attributes through a full-script open coding analysis. Identified features were mapped using Parallel Coordinates Plot, with which users could analyze and compare logo designs. This visualization process might contribute to any designers or researchers who are looking for ways to study historical trend or visual attributes of logos.
DOI: 10.6084/m9.figshare.1619639.v5
title: Dataset and Image Inventory

description: This is the figure and dataset inventory for the article: <strong>The detection of emerging trends using Wikipedia traffic data and context networks</strong>
DOI: 10.6084/m9.figshare.1618824.v1
title: Mapping Visual Attributes of Logos: A Case Study of Parallel Coordinate Plots (EuroVis 2015)

description: This paper uses visualization technique on graphical features of logos as a different way to approach creating or studying logo designs. We gathered 720 logos from the website, logolounge.com, and identified 9 features and 55 feature attributes through a full-script open coding analysis. Identified features were mapped using Parallel Coordinates Plot, with which users could analyze and compare logo designs. This visualization process might contribute to any designers or researchers who are looking for ways to study historical trend or visual attributes of logos.
DOI: 10.6084/m9.figshare.1618820
title: Radial History Flow: Direct Visualization of Author Dynamics in Wikipedia (EuroVis 2015)

description: In this paper, we propose Radial History Flow, which enhances History Flow by enabling comparison of author dynamics shown in the revision histories of Wikipedia articles. The key objective of this study is to unravel the complex relationships among the authors by linking two authors when one has a history of revising the other’s contribution on the article. Using the revision history dataset of the Wikipedia article on ‘electric energy’, we perform a case study and demonstrate the feasibility of Radial History Flow.
DOI: 10.6084/m9.figshare.1618820.v1
title: Radial History Flow: Direct Visualization of Author Dynamics in Wikipedia (EuroVis 2015)

description: In this paper, we propose Radial History Flow, which enhances History Flow by enabling comparison of author dynamics shown in the revision histories of Wikipedia articles. The key objective of this study is to unravel the complex relationships among the authors by linking two authors when one has a history of revising the other’s contribution on the article. Using the revision history dataset of the Wikipedia article on ‘electric energy’, we perform a case study and demonstrate the feasibility of Radial History Flow.
DOI: 10.6084/m9.figshare.1618823.v2
title: N-polar Visualization: A Radial Layout with Multiple Interactive Anchors (PacificVis 2015)

description: In this paper, we propose N-polar Visualization, an interactive visualization technique to graphically represent how the data objects are related against multiple anchors. This technique allows the user to assign a particular set of data objects as anchors and radially move them around of a circle. This enables the user to control the arrangement of the anchors and interactively perform multiple comparisons of the data set. To test the utility of this technique, a case study was performed using N-polar Visualization of UN General Assembly voting data, and the underlying insights were compared with the actual historical events.
DOI: 10.6084/m9.figshare.1618823.v1
title: N-polar Visualization (PacificVis 2015)

description: In this paper, we propose N-polar Visualization, an interactive visualization technique to graphically represent how the data objects are related against multiple anchors. This technique allows the user to assign a particular set of data objects as anchors and radially move them around of a circle. This enables the user to control the arrangement of the anchors and interactively perform multiple comparisons of the data set. To test the utility of this technique, a case study was performed using N-polar Visualization of UN General Assembly voting data, and the underlying insights were compared with the actual historical events.
DOI: 10.6084/m9.figshare.1618810
title: Supplemental files for NSPN manuscript "Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome".

description: All supplemental files submitted in support of NSPN manuscript "Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome".<br>
DOI: 10.6084/m9.figshare.1618815
title: Analysis directory for NSPN manuscript "Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome".

description: The directory contains the figures and tables of statistics that combine results from across the three cohorts featured in NSPN manuscript "Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome". In order to reproduce data analyses the DISCOVERY.zip, VALIDATION.zip and COMPLETE.zip directories should be unzipped into this CT_MT_ANALYSES directory.
DOI: 10.6084/m9.figshare.1618815.v1
title: Analysis directory for NSPN manuscript "Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome".

description: The directory contains the figures and tables of statistics that combine results from across the three cohorts featured in NSPN manuscript "Adolescence is associated with genomically patterned consolidation of the hubs of the human brain connectome". In order to reproduce data analyses the DISCOVERY.zip, VALIDATION.zip and COMPLETE.zip directories should be unzipped into this CT_MT_ANALYSES directory.
DOI: 10.6084/m9.figshare.1618807
title: A systematic review of stress measurement methods, sample size, study environment, and single or conspecific housing in studies on the domestic cat

description: This systematic review looks at studies which measured stress in domestic cats, and serves to highlight commonalities, differences, and gaps in sample size, sample location, solitary or conspecific housing and types of stress measurements in these studies. A search of the literature was conducted on November 30, 2015 using Web of Science and following the PRISMA flow diagram criteria (http://www.prisma-statement.org/PRISMAStatement/FlowDiagram.aspx). The keywords used were "cat OR cats", "fel*", "behavio$r" and "stress" and keywords excluded were "mice", "mouse", and "rat*" which resulted in 88 articles. These articles were then screened to assess their relevance to the review topic, by selecting only articles conforming to two criteria: 1) the domestic cat was the subject of study, and 2) stress in cats was measured in at least one way as part of the study methods. Thirty-five of the original articles conformed to the criteria, and data was extracted from these articles in 5 categories: type of stress measurement, details of stress measurement, sample size, study environment, and single or group housing. This data was then analyzed for trends and presented within the final review paper.
DOI: 10.6084/m9.figshare.1618809
title: Tetraploidization or autophagy: the ultimate fate of senescent human endometrial stem cells under ATM or p53 inhibition

description: Previously we demonstrated that endometrium-derived human mesenchymal stem cells (hMESCs) via activation of the ATM/p53/p21/Rb pathway enter the premature senescence in response to oxidative stress. Down regulation effects of the key components of this signaling pathway, particularly ATM and p53, on a fate of stressed hMESCs have not yet been investigated. In the present study by using the specific inhibitors Ku55933 and Pifithrin-α, we confirmed implication of both ATM and p53 in H<sub>2</sub>O<sub>2</sub>-induced senescence of hMESCs. ATM or p53 down regulation was shown to modulate differently the cellular fate of H<sub>2</sub>O<sub>2</sub>-treated hMESCs. ATM inhibition allowed H<sub>2</sub>O<sub>2</sub>-stimulated hMESCs to escape the permanent cell cycle arrest due to loss of the functional ATM/p53/p21/Rb pathway, and induced bypass of mitosis and re-entry into S phase, resulting in tetraploid cells. On the contrary, suppression of the p53 transcriptional activity caused a pronounced cell death of H<sub>2</sub>O<sub>2</sub>-treated hMESCs via autophagy induction. The obtained data clearly demonstrate that down regulation of ATM or p53 shifts senescence of human endometrial stem cells towards tetraploidization or autophagy
DOI: 10.6084/m9.figshare.1618804
title: 2014PSociusDatanestIDInc.csv

description: Data set associated with Leighton and Vander Meiden (2016)
DOI: 10.6084/m9.figshare.1618809.v1
title: Tetraploidization or autophagy: the ultimate fate of senescent human endometrial stem cells under ATM or p53 inhibition

description: Previously we demonstrated that endometrium-derived human mesenchymal stem cells (hMESCs) via activation of the ATM/p53/p21/Rb pathway enter the premature senescence in response to oxidative stress. Down regulation effects of the key components of this signaling pathway, particularly ATM and p53, on a fate of stressed hMESCs have not yet been investigated. In the present study by using the specific inhibitors Ku55933 and Pifithrin-α, we confirmed implication of both ATM and p53 in H<sub>2</sub>O<sub>2</sub>-induced senescence of hMESCs. ATM or p53 down regulation was shown to modulate differently the cellular fate of H<sub>2</sub>O<sub>2</sub>-treated hMESCs. ATM inhibition allowed H<sub>2</sub>O<sub>2</sub>-stimulated hMESCs to escape the permanent cell cycle arrest due to loss of the functional ATM/p53/p21/Rb pathway, and induced bypass of mitosis and re-entry into S phase, resulting in tetraploid cells. On the contrary, suppression of the p53 transcriptional activity caused a pronounced cell death of H<sub>2</sub>O<sub>2</sub>-treated hMESCs via autophagy induction. The obtained data clearly demonstrate that down regulation of ATM or p53 shifts senescence of human endometrial stem cells towards tetraploidization or autophagy
DOI: 10.6084/m9.figshare.1618803
title: 2014PSociusDataTOTALS.csv

description: Data associated with Leighton and Vander Meiden (2016)