cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3bw36t
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypochrosis hyadaria Guenée"
 ]
}

 The dataset includes 173 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078218-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fg9wgs
title: Occurrence Download

description: A dataset containing 79641 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyathea J.E.Sm.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 79641 records from 190 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015115-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.menytm
title: Occurrence Download

description: A dataset containing 169340 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is NHMO DNA Bank Fish and Herptile collection"
 ]
}

 The dataset includes 169340 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001685-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjvdv8
title: Occurrence Download

description: A dataset containing 167544 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is 6 - Inventaire général de la flore vasculaire et de la fonge sur le TAG du CBNMed-Divers jeux de données floristiques produits par le CEN du Languedoc-Roussillon dans les départements du 06, 11, 13, 30, 34, 48, 66, 83, 84"
 ]
}

 The dataset includes 167544 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001684-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fctut
title: Occurrence Download

description: A dataset containing 171564 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Abundances and biological traits of fish sampled by electrofishing (except specific abundance indices) on the River Oir since 1988 (France)."
 ]
}

 The dataset includes 171564 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001686-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.824zr3
title: Occurrence Download

description: A dataset containing 1027275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Philippines",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2014-2024"
 ]
}

 The dataset includes 1027275 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001672-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y9gb8u
title: Occurrence Download

description: A dataset containing 634 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aedes scutellaris"
 ]
}

 The dataset includes 634 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084984-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8v8jx2
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leptinotarsa decemlineata",
 "Country is Luxembourg",
 "HasCoordinate is true"
 ]
}

 The dataset includes 60 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084985-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c87etk
title: Occurrence Download

description: A dataset containing 1383 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Cycas L."
 ]
}

 The dataset includes 1383 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001944-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g6t2ub
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Pitcairn",
 "ScientificName is Scaevola taccada"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005897-250525065834625/datasets/export for details.
DOI: 10.15468/dl.ggpz2y
title: Occurrence Download

description: A dataset containing 515 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astrocaryum malybo H.Karst."
 ]
}

 The dataset includes 515 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005886-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4fh55
title: Occurrence Download

description: A dataset containing 3381 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Periploca graeca"
 ]
}

 The dataset includes 3381 records from 229 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028689-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13130/rd_unimi/jmksaw/gelr0o
title: 5.0_0.0.tab

description: :unav
DOI: 10.13130/rd_unimi/jmksaw/ij7gdg
title: 9.0_0.0.tab

description: :unav
DOI: 10.13130/rd_unimi/jmksaw/7d4l26
title: 8.0_0.0.tab

description: :unav
DOI: 10.13130/rd_unimi/jmksaw/7rxdsc
title: poisoned.h5netcdf

description: :unav
DOI: 10.13130/rd_unimi/jmksaw/qf9bt3
title: m2.tab

description: :unav
DOI: 10.58007/eg7g-yr63
title: Time Series Open Positions in Germany at the regional level – Delisted Positions
title: Zeitreihe Offener Arbeitsstellen auf regionaler Ebene in Deutschland - Abgänge

description: This dataset is a time series of data related to open positions across Germany and represents information about delisted/filled positions in a monthly interval. The data was scraped as individual files from the Federal Employment Agency Germany (https://statistik.arbeitsagentur.de/SiteGlobals/Forms/Suche/Einzelheftsuche_Formular.html?topic_f=gemeldete-arbeitsstellen) and converted into a time series. Data at the county-level is available starting from December 2015 till (currently) January 2025. The geographical data was only available in text form. A county identifier as well as a selection of BBSR spatial typologies were appended based on name matching accounting for differences in naming across time - other geographies (labor market areas) are included but not supplied with spatial references. Changes in punctuation in the variables where accounted for affecting especially Sheets 2_x_x and 3_x_x. To create a unified time series in cases of varying punctuation additonal variables were created representing the industry code (ICode for 2_x_x) and an occupation group code (BCode for 3_x_x) based on the 3 first symbold of the industry or occupation code. It is recommended to use these codes for subsetting instead of the written out names.

The data represents the sheets 1_3, 2_1_3, 2_2_3, 3_1_3 and 3_2_3 of the original data from the Federal Employment Agency Germany and includes all variables included in the original data.

The webscraper and code to create the time series from the original files are available in supplemental publications.

Please contact us via the associated gitlab to report errors.

description: Der Datensatz ist eine Umwandlung einzelner Dateien der Bundesagentur für Arbeit in eine Zeitreihe zur Analyse. Die Daten geben einen Überblick über Abgänge bei offenen Stellen. Regionale Daten sind auf Landkreis- und Arbeitsmarktdistriktebene verfügbar. Nur der Landkreisebene wird eine GEOID zugewiesen. Regionale Daten sind monatlich von Dezember 2015 bis Januar 2025 verfügbar. Der Datensatz wird gelegentlich aktualisiert und es werden neue Versionen erstellt. Der Code wird als Teil der Veröffentlichung bereitgestellt.
DOI: 10.5281/zenodo.15272342
title: IODP Expedition 346 P-wave velocity caliper (section)

description: P-wave velocity data were measured on undisturbed section halves (JRSO-defined x-axis) and/or discrete cube and cylinder samples (x, y, or z-axis) using pairs of piezoelectric transducers mounted on a caliper system. Report includes P-wave velocity in x, y, and/or z-direction, caliper separation, traveltime between transucers, and first arrival picks.
DOI: 10.5281/zenodo.15272343
title: IODP Expedition 346 P-wave velocity caliper (section)

description: P-wave velocity data were measured on undisturbed section halves (JRSO-defined x-axis) and/or discrete cube and cylinder samples (x, y, or z-axis) using pairs of piezoelectric transducers mounted on a caliper system. Report includes P-wave velocity in x, y, and/or z-direction, caliper separation, traveltime between transucers, and first arrival picks.
DOI: 10.5281/zenodo.15272339
title: IODP Expedition 346 P-wave velocity bayonet (section)

description: P-wave velocity data were measured on undisturbed section halves using pairs of piezoelectric transducers mounted in bayonets that are inserted into soft sediment along the JRSO-defined y-axis and/or z-axis. Report includes P-wave velocity in y and/or z direction, bayonet separation, traveltime between transducers, and first arrival picks.
DOI: 10.5281/zenodo.15272340
title: IODP Expedition 346 P-wave velocity bayonet (section)

description: P-wave velocity data were measured on undisturbed section halves using pairs of piezoelectric transducers mounted in bayonets that are inserted into soft sediment along the JRSO-defined y-axis and/or z-axis. Report includes P-wave velocity in y and/or z direction, bayonet separation, traveltime between transducers, and first arrival picks.
DOI: 10.5281/zenodo.15272337
title: IODP Expedition 346 Laser height profile (section half)

description: Height profile data were measured on the Section Half Multisensor Logger (SHMSL) by a rangefinding laser and recorded in uncorrected height units in millimeters in CSV files.
DOI: 10.5281/zenodo.15272338
title: IODP Expedition 346 Laser height profile (section half)

description: Height profile data were measured on the Section Half Multisensor Logger (SHMSL) by a rangefinding laser and recorded in uncorrected height units in millimeters in CSV files.
DOI: 10.15468/dl.ay4hjk
title: Occurrence Download

description: A dataset containing 913 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Loxodon macrorhinus Müller & Henle, 1839"
 ]
}

 The dataset includes 913 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000034-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/mgm-7y0-jdm
title: Cellana ornata (Dillwyn, 1817)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p60-5j7-qsp
title: Hemimarginula pumila (A. Adams, 1852)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0qg-0h3-dk3
title: Scurria araucana (A. d'Orbigny, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wy0-h49-6qt
title: Clio pyramidata Linnaeus, 1767

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9n1-962-f3p
title: Fissurella barbadensis (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/15x-g9c-yx4
title: Brotia torquata (von dem Busch, 1842)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ad7-exh-18x
title: Clio pyramidata Linnaeus, 1767

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1zs-jvf-ewj
title: Polyplacophora Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gt3-er8-7w4
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0j6-br9-lsy
title: Clione limacina limacina (Phipps, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dq8-zk1-can
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/92j-5jy-0ep
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v39-y61-90e
title: Patella vulgata Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z1q-cdc-709
title: Clione limacina limacina (Phipps, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.16814445
title: Whole Genome Sequencing Pt2 Generation and characterization of a novel mouse model of Becker Muscular Dystrophy with a deletion of exons 52 to 55

description: Becker muscular dystrophy (BMD) is a rare X-linked recessive neuromuscular disorder, frequently caused by in-frame deletions in the DMD gene that result in the production of a truncated, yet functional, dystrophin protein. The consequences of BMD-causing in-frame deletions on the organism are difficult to predict, especially in regard to long-term prognosis. Here, we used CRISPR-Cas9 to generate a new Dmd Δ52-55 mouse model by deleting exons 52-55 in the Dmd gene, resulting in a BMD-like in-frame deletion. To delineate the long-term effects of this deletion, we studied these mice over 52 weeks by performing histology and echocardiography analyses and assessing motor functions. The dataset presented here shows the results of the Whole Genome Sequencing that was conducted to confirm the presence of the 52-55 deletion, and, thus, the generation of this new model. Due to size restrictions, this WGS dataset will be published on Zenodo in three parts. This second part contains the R1 fastq and associated files as well as the bai (index) and md5 files accompanying the bam file submitted in Part 1. 

Workflow: FASTQ files were first converted into unmapped BAM format using Picard FastqToSam. Subsequently, reads were aligned to a custom hybrid reference genome (GRCm38_68 combined with human hg38 sequences and additional vector constructs) using BWA MEM, followed by merging the aligned and unmapped reads with GATK's MergeBamAlignment. The resulting BAM files underwent duplicate marking using GATK MarkDuplicates tool to produce BAM files for downstream analysis. Data can be visualized using the Integrated Genome Viewer (IGV).
DOI: 10.5281/zenodo.16814446
title: Whole Genome Sequencing Pt2 Generation and characterization of a novel mouse model of Becker Muscular Dystrophy with a deletion of exons 52 to 55

description: Becker muscular dystrophy (BMD) is a rare X-linked recessive neuromuscular disorder, frequently caused by in-frame deletions in the DMD gene that result in the production of a truncated, yet functional, dystrophin protein. The consequences of BMD-causing in-frame deletions on the organism are difficult to predict, especially in regard to long-term prognosis. Here, we used CRISPR-Cas9 to generate a new Dmd Δ52-55 mouse model by deleting exons 52-55 in the Dmd gene, resulting in a BMD-like in-frame deletion. To delineate the long-term effects of this deletion, we studied these mice over 52 weeks by performing histology and echocardiography analyses and assessing motor functions. The dataset presented here shows the results of the Whole Genome Sequencing that was conducted to confirm the presence of the 52-55 deletion, and, thus, the generation of this new model. Due to size restrictions, this WGS dataset will be published on Zenodo in three parts. This second part contains the R1 fastq and associated files as well as the bai (index) and md5 files accompanying the bam file submitted in Part 1. 

Workflow: FASTQ files were first converted into unmapped BAM format using Picard FastqToSam. Subsequently, reads were aligned to a custom hybrid reference genome (GRCm38_68 combined with human hg38 sequences and additional vector constructs) using BWA MEM, followed by merging the aligned and unmapped reads with GATK's MergeBamAlignment. The resulting BAM files underwent duplicate marking using GATK MarkDuplicates tool to produce BAM files for downstream analysis. Data can be visualized using the Integrated Genome Viewer (IGV).
DOI: 10.3535/wmp-sx2-99k
title: Clione limacina (Phipps, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/375-f1f-8kk
title: Diodora listeri (A. d'Orbigny, 1850)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j6n-g5j-rnf
title: Kelliella abyssicola (Forbes, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hn6-blw-pln
title: Fissurella oriens G. B. Sowerby I, 1834

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ss9-l8s-mkc
title: Diodora J. E. Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5f2-6r3-t2y
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a23-m4j-lpe
title: Nerita patula Récluz, 1841

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7al-6v3-gfv
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/stx-3by-emv
title: Onoba semicostata (Montagu, 1803)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dv5-nfw-av7
title: Collonista Iredale, 1918

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jt2-qm8-7yj
title: Eburna balteata G. B. Sowerby I, 1823

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0mr-mry-l8y
title: Lunella coronata (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9m5-p0n-7sp
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/glm-y3r-pp2
title: Glyptophysa gibbosa (A. Gould, 1847)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6ny-hna-tgr
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sfl-v60-tfn
title: Spongiobranchaea australis A. d'Orbigny, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vdx-fzc-g9c
title: Pterotrachea coronata Forsskål, 1775

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yc3-hhe-6ld
title: Lithopoma phoebium (Röding, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jj2-a36-dp7
title: Scutellastra cochlear (Born, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yb9-0qf-xg8
title: Cymbula granatina (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4x1-hb1-092
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d94-pk2-yd1
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z4f-bfh-8re
title: Nerita nigrita Röding, 1798

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x9f-n1b-4kc
title: Fissurella mutabilis G. B. Sowerby I, 1835

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hly-d8b-anm
title: Octopus vulgaris Cuvier, 1797

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xqy-27v-sep
title: Vaughtia fenestrata (A. Gould, 1860)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c0k-qgj-cbm
title: Parviturbo fenestratus (Chaster, 1896)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y17-pjv-hnr
title: Menathais intermedia (Kiener, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a7s-0pp-vx4
title: Liardetia Gude, 1913

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l9x-l32-wpa
title: Epimenia australis (Thiele, 1897)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8xd-d5t-szp
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g21-74d-b8f
title: Pectinidae Rafinesque, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q2x-h08-5yb
title: Vitta clenchi (H. D. Russell, 1940)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fq6-8zj-48g
title: Fissurella angusta (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vdk-jfd-vav
title: Neripteron cornucopia (W. H. Benson, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jpp-wlq-f3g
title: Neritidae Rafinesque, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yep-5h8-jmf
title: Cerithium litteratum (Born, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9cd-5cs-9pm
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/srj-pnn-fks
title: Cymbulia peronii Blainville, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9yq-sn6-6f0
title: Hydromyles globulosus (Rang, 1825)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k44-pvp-eyh
title: Claremontiella nodulosa (C. B. Adams, 1845)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.