cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29581865
title: Supplementary Material for: Association between blood flow measured within 30 days from AV access creation and thrombosis risk

description: Introduction: Arteriovenous (AV) hemodialysis accesses are hampered by the risk of thrombosis. Due to lack of evidence, current guidelines do not suggest routine assessment of AV access blood flow (Qa) for surveillance. This study aims to analyze the association between post-operative Qa and thrombosis risk, in distal and proximal autologous AV fistulae (dAVF, and pAVF), and AV grafts (AVG).
Methods: This retrospective cohort study included all AV accesses created in San Paolo Hospital (Milan, IT) between 2013 and 2022, with a post-operative Qa measurement available within 30 days from creation. Thrombosis-free survival curves were plotted using the Kaplan-Meier method. The association between Qa and thrombosis risk was studied by multivariate Cox proportional hazard models. Non-linearity was assessed using natural splines. 
Results: A total of 218 AV accesses (92 dAVF, 76 pAVF, and 50 AVG) were created in 191 patients. During a median follow-up time of 1.35 years, 66 AV access thrombosis occurred. In dAVF, Qa showed a significant non-linear association with thrombosis risk, with nadir at Qa of 1289 ml/min and an exponential risk increase for Qa &lt;800 ml/min. In dAVF with a Qa&lt;1289 ml/min, there was a 43% increase in the risk of thrombosis every 100 ml/min decrease in Qa (aHR 1.43 [1.11-1.83], p 0.005). In pAVF and AVG, Qa was not associated with thrombosis risk. 
Conclusion: Post-operative Qa shows a non-linear association with thrombosis risk in dAVF, suggesting that this may be a useful tool to identify high-risk dAVF allowing closer surveillance or preventive interventions.
DOI: 10.6084/m9.figshare.29581865.v1
title: Supplementary Material for: Association between blood flow measured within 30 days from AV access creation and thrombosis risk

description: Introduction: Arteriovenous (AV) hemodialysis accesses are hampered by the risk of thrombosis. Due to lack of evidence, current guidelines do not suggest routine assessment of AV access blood flow (Qa) for surveillance. This study aims to analyze the association between post-operative Qa and thrombosis risk, in distal and proximal autologous AV fistulae (dAVF, and pAVF), and AV grafts (AVG).
Methods: This retrospective cohort study included all AV accesses created in San Paolo Hospital (Milan, IT) between 2013 and 2022, with a post-operative Qa measurement available within 30 days from creation. Thrombosis-free survival curves were plotted using the Kaplan-Meier method. The association between Qa and thrombosis risk was studied by multivariate Cox proportional hazard models. Non-linearity was assessed using natural splines. 
Results: A total of 218 AV accesses (92 dAVF, 76 pAVF, and 50 AVG) were created in 191 patients. During a median follow-up time of 1.35 years, 66 AV access thrombosis occurred. In dAVF, Qa showed a significant non-linear association with thrombosis risk, with nadir at Qa of 1289 ml/min and an exponential risk increase for Qa &lt;800 ml/min. In dAVF with a Qa&lt;1289 ml/min, there was a 43% increase in the risk of thrombosis every 100 ml/min decrease in Qa (aHR 1.43 [1.11-1.83], p 0.005). In pAVF and AVG, Qa was not associated with thrombosis risk. 
Conclusion: Post-operative Qa shows a non-linear association with thrombosis risk in dAVF, suggesting that this may be a useful tool to identify high-risk dAVF allowing closer surveillance or preventive interventions.
DOI: 10.15468/dl.wnm2pq
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ocimum forsskalii"
 ]
}

 The dataset includes 47 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023458-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4e6rrh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carex panicea gracilis, Carex panicea humilis, Carex panicea latifolia, Carex panicea longipedunculata, Carex panicea melanocarpa, Carex panicea microcarpa, Carex panicea microcarpa, Carex panicea nigra, Carex panicea pallida, Carex panicea refracta)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023462-250711103210423/datasets/export for details.
DOI: 10.15468/dl.dkrd7j
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAD1454"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023460-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ccsgru
title: Occurrence Download

description: A dataset containing 40127 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gracula religiosa"
 ]
}

 The dataset includes 40127 records from 137 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023461-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21957/5hd2-e117
title: Tropical relaxation experiment
DOI: 10.5281/zenodo.15973035
title: Data for: Post-collision interaction in the liquid phase: the role of electron scattering

description: Dataset pertaining to the article "The solvation shell probed by resonant intermolecular Coulombic decay", submitted for publication in Physical Review A. 

The experimental data consists of all the raw electron spectra that were used to obtain the results presented in the figures of the paper. They are compiled as .h5 hdf5 files which contain spectra with some relevant metadata.

The simulation data consists of the output of the Monte-Carlo electron transport simulations, in the form of energy shift spectra computed either with the classical or semiclassical methods presented in the article. They are given as .txt ascii files. 

Contact person for questions regarding this data set: Rémi Dupuy, remi.dupuy@sorbonne-universite.fr. Do not hesitate to contact me for further requests regarding the data analysis or the simulation procedures. If you use these data for your scientific work we are curious to learn about it.
DOI: 10.5281/zenodo.15973036
title: Data for: Post-collision interaction in the liquid phase: the role of electron scattering

description: Dataset pertaining to the article "The solvation shell probed by resonant intermolecular Coulombic decay", submitted for publication in Physical Review A. 

The experimental data consists of all the raw electron spectra that were used to obtain the results presented in the figures of the paper. They are compiled as .h5 hdf5 files which contain spectra with some relevant metadata.

The simulation data consists of the output of the Monte-Carlo electron transport simulations, in the form of energy shift spectra computed either with the classical or semiclassical methods presented in the article. They are given as .txt ascii files. 

Contact person for questions regarding this data set: Rémi Dupuy, remi.dupuy@sorbonne-universite.fr. Do not hesitate to contact me for further requests regarding the data analysis or the simulation procedures. If you use these data for your scientific work we are curious to learn about it.
DOI: 10.15468/dl.zfk9af
title: Occurrence Download

description: A dataset containing 284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cotula australis",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 284 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023463-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21957/zgmt-gh30
title: Polar relaxation experiment
DOI: 10.21957/39r0-pe66
title: Control 48R1 xperiment
DOI: 10.34712/042.2
title: Research data to project: Fixing Change? Maintaining Hamburg’s Gas, Water and Sanitation Infrastructures 1842 until the present day
DOI: 10.15468/dl.kudg9w
title: Occurrence Download

description: A dataset containing 1931 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cotula australis",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1931 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023464-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qcmty8
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anoplophora glabripennis",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 16 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023466-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9k9rks
title: Occurrence Download

description: A dataset containing 207 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Descurainia streptocarpa"
 ]
}

 The dataset includes 207 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023467-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aenkac
title: Occurrence Download

description: A dataset containing 1243 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus norvegicus",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1243 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023465-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m2zc68
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mespilodaphne cupularis"
 ]
}

 The dataset includes 116 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023468-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yynef8
title: Occurrence Download

description: A dataset containing 193844 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus norvegicus",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 193844 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023436-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8drww
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carex panicea robusta, Carex panicea tumidula, Carex panicea dalmatica, Carex panicea panicea, Carex panicea pelia, Carex panicea ramosa, Carex panicea elatior, Carex panicea glaucescens, Carex panicea gynobasica, Carex panicea hercynica)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 19 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023469-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6whnbu
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAD1455"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023470-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pe4haz
title: Occurrence Download

description: A dataset containing 18527 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is one of (Argentina, Bolivia (Plurinational State of), Peru)",
 "OccurrenceStatus is Present",
 "TaxonKey is Vultur gryphus",
 "Year 2020-2025"
 ]
}

 The dataset includes 18527 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023474-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jygcuc
title: Occurrence Download

description: A dataset containing 417 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Miliusa balansae"
 ]
}

 The dataset includes 417 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023473-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f7ynga
title: Occurrence Download

description: A dataset containing 20448 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((174.44116 -41.65544,177.00127 -41.65544,177.00127 -40.63271,174.44116 -40.63271,174.44116 -41.65544))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hemiphaga novaeseelandiae"
 ]
}

 The dataset includes 20448 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023475-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aj2qfa
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus norvegicus",
 "Country is Egypt",
 "HasCoordinate is true"
 ]
}

 The dataset includes 50 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023477-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.872xzs
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sitodiplosis mosellana",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023478-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27937988
title: Prognostic predictive value of Ki-67 in stage I–II triple-negative breast cancer

description: <b>Aim:</b> Our research aimed to determine an optimal cutoff value and investigate the prognostic predictive function of Ki-67. <b>Materials & methods:</b> We retrospectively enrolled 1146 patients diagnosed with stage I–II triple-negative breast cancer. Disease-free and overall survival were analyzed using the Kaplan–Meier method and the Cox regression model. <b>Results:</b> We classified Ki-67 &gt;45% as the high group (n = 716). A Ki-67 level of &gt;45% was associated with poorer disease-free survival (p = 0.039) and overall survival (p = 0.029). Lymph node stage, neoadjuvant chemotherapy, and radiotherapy were independent predictive variables of prognosis. <b>Conclusion:</b> Triple-negative breast cancer may be further subcategorized according to the Ki-67 level. Neoadjuvant chemotherapy and postoperative radiotherapy can improve the prognosis of early triple-negative breast cancer. This study aimed to find the best value of Ki-67, which is a marker used in breast cancer. At last, according to the Ki-67 level over 45%, triple-negative breast cancer may be divided into two groups. Based on the level of Ki-67, treatment decisions may be better. However, we still need more studies to confirm this. Triple-negative breast cancer may be further subcategorized according to the Ki-67 level &gt;45%, which is associated with a poorer prognosis. Treatment decisions based on the level of Ki-67 may be more favorable to the prognosis of patients. This research aimed to determine an optimal cutoff value and investigate the prognostic predictive function of Ki-67, which is a proliferation-related biomarker used in luminal breast cancer. We retrospectively enrolled 1146 patients diagnosed with stage I–II triple-negative breast cancer, between Jan 2013 and Dec 2020, at the Sun Yat-sen University Cancer Center. The best cutoff point for Ki-67 was 45%, which was found in the X-tile. For the 1146 patients, we classified Ki-67 &gt;45% as the high group and Ki-67 ≤ 45% as the low group. Lymph node stage, neoadjuvant chemotherapy, and postoperative radiotherapy were independent predictive variables of prognosis. Triple-negative breast cancer may be further subcategorized according to the Ki-67 level &gt;45%, which is associated with a poorer prognosis, particularly in the lymph node-negative group. Neoadjuvant chemotherapy and postoperative radiotherapy can improve the prognosis. Therefore, there is still a need for prospective studies with large sample sizes, specialized assay technicians, and standard operating procedures to explore the optimal detection procedure for Ki-67.
DOI: 10.6084/m9.figshare.27937988.v1
title: Prognostic predictive value of Ki-67 in stage I–II triple-negative breast cancer

description: <b>Aim:</b> Our research aimed to determine an optimal cutoff value and investigate the prognostic predictive function of Ki-67. <b>Materials & methods:</b> We retrospectively enrolled 1146 patients diagnosed with stage I–II triple-negative breast cancer. Disease-free and overall survival were analyzed using the Kaplan–Meier method and the Cox regression model. <b>Results:</b> We classified Ki-67 &gt;45% as the high group (n = 716). A Ki-67 level of &gt;45% was associated with poorer disease-free survival (p = 0.039) and overall survival (p = 0.029). Lymph node stage, neoadjuvant chemotherapy, and radiotherapy were independent predictive variables of prognosis. <b>Conclusion:</b> Triple-negative breast cancer may be further subcategorized according to the Ki-67 level. Neoadjuvant chemotherapy and postoperative radiotherapy can improve the prognosis of early triple-negative breast cancer. This study aimed to find the best value of Ki-67, which is a marker used in breast cancer. At last, according to the Ki-67 level over 45%, triple-negative breast cancer may be divided into two groups. Based on the level of Ki-67, treatment decisions may be better. However, we still need more studies to confirm this. Triple-negative breast cancer may be further subcategorized according to the Ki-67 level &gt;45%, which is associated with a poorer prognosis. Treatment decisions based on the level of Ki-67 may be more favorable to the prognosis of patients. This research aimed to determine an optimal cutoff value and investigate the prognostic predictive function of Ki-67, which is a proliferation-related biomarker used in luminal breast cancer. We retrospectively enrolled 1146 patients diagnosed with stage I–II triple-negative breast cancer, between Jan 2013 and Dec 2020, at the Sun Yat-sen University Cancer Center. The best cutoff point for Ki-67 was 45%, which was found in the X-tile. For the 1146 patients, we classified Ki-67 &gt;45% as the high group and Ki-67 ≤ 45% as the low group. Lymph node stage, neoadjuvant chemotherapy, and postoperative radiotherapy were independent predictive variables of prognosis. Triple-negative breast cancer may be further subcategorized according to the Ki-67 level &gt;45%, which is associated with a poorer prognosis, particularly in the lymph node-negative group. Neoadjuvant chemotherapy and postoperative radiotherapy can improve the prognosis. Therefore, there is still a need for prospective studies with large sample sizes, specialized assay technicians, and standard operating procedures to explore the optimal detection procedure for Ki-67.
DOI: 10.6084/m9.figshare.27719219
title: CD4+ T-cell transcription factors predict phenoconversion in idiopathic rapid eye movement sleep behavior disorder

description: <b>Aim:</b> Early biomarkers of phenoconversion to neurodegeneration are crucial to identify individuals at high risk. In patients with idiopathic REM sleep behavior disorder (iRBD), the strongest risk factor for neurodegeneration, CD4<sup>+</sup> T cells exhibit a peculiar transcription factor pattern. <b>Objective:</b> To assess transcription factor mRNA levels in CD4<sup>+</sup> T cells as predictive biomarkers of phenoconversion in iRBD patients. <b>Methods:</b> iRBD patients were followed prospectively. ROC curve analysis and Kaplan-Meier curves were used to assess the discrimination between converters and non-converters. <b>Results:</b> CD4<sup>+</sup> T cells from converters had higher <i>STAT1</i>, and lower <i>GATA3</i> and <i>FOXP3</i> mRNA levels. Hazard ratio was 58.3 (95% CI: 6.2–547.1) for higher <i>STAT1</i>, 101.2 (95% CI: 16.8–609.4) for lower <i>GATA3</i> and 15.7 (2.7–91.4) for lower <i>FOXP3</i>. <b>Conclusion:</b><i>STAT1</i>, <i>GATA3</i> and <i>FOXP3</i> mRNA levels in CD4<sup>+</sup> T cells are promising predictive biomarkers of phenoconversion in iRBD patients. Idiopathic REM sleep behavior disorder (iRBD) can lead to neurodegeneration, and the early identification of patients at risk would be crucial. Our research now shows that mRNA levels of some transcription factors in CD4<sup>+</sup> T cells may represent early biomarkers predicting phenoconversion to established neurodegenerative conditions on average up to 3.5 years earlier. Patients with idiopathic REM sleep behavior disorder (iRBD) are at risk of progression toward established neurodegeneration, and early biomarkers of phenoconversion would be crucial to identify individuals at higher risk. This study shows that, in iRBD subjects progressing to neurodegenerative conditions, CD4<sup>+</sup> T cells have higher expression of the transcription factors <i>STAT1</i>, and lower levels of <i>GATA3</i> and <i>FOXP3</i> on average 3.5 years before progression. <i>STAT1</i>, <i>GATA3</i> and <i>FOXP3</i> mRNA levels in CD4<sup>+</sup> T cells are therefore promising predictive biomarkers of phenoconversion in iRBD patients.