cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26030/2bde-0674
title: Skeletal muscle-on-a-chip in microgravity as a platform for regeneration modeling and drug screening - vastus lateralis data

description: Microgravity has been shown to lead to both muscle atrophy and impaired muscle regeneration. The purpose was to study the efficacy of microgravity to model impaired muscle regeneration in an engineered muscle platform and then to demonstrate the feasibility of performing drug screening in this model. Engineered human muscle was launched to the International Space Station National Laboratory, where the effect of microgravity exposure for 7 days was examined by transcriptomics and proteomics approaches. Gene set enrichment analysis of engineered muscle cultured in microgravity, compared to normal gravity conditions, highlighted a metabolic shift toward lipid and fatty acid metabolism, along with increased apoptotic gene expression. The addition of pro-regenerative drugs, insulin-like growth factor-1 (IGF-1) and a 15-hydroxyprostaglandin dehydrogenase inhibitor (15-PGDH-i), partially inhibited the effects of microgravity. In summary, microgravity mimics aspects of impaired myogenesis, and the addition of these drugs could partially inhibit the effects induced by microgravity. Only data for vastus lateralis tissue samples are reported here. See OSD-781 for myoblast data.
DOI: 10.15468/dl.d49a3d
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Strabomantis ruizi"
 ]
}

 The dataset includes 59 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028138-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5msfjq
title: Occurrence Download

description: A dataset containing 2103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is greater than or equal to 1900",
 "TaxonKey is Suaeda splendens"
 ]
}

 The dataset includes 2103 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028137-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atsshc
title: Occurrence Download

description: A dataset containing 77734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Necora",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 77734 records from 234 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028107-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mdegbb
title: Occurrence Download

description: A dataset containing 584 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (CAN.5_1, CAN.4_1, CAN.10_1, CAN.7_1)",
 "TaxonKey is one of (Achyranthes japonica, Lonicera japonica, Berberis vulgaris, Euonymus alatus, Ludwigia peploides, Lysimachia nummularia, Marsilea quadrifolia, Pinus mugo, Azolla schopfii)"
 ]
}

 The dataset includes 584 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028143-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwyecs
title: Occurrence Download

description: A dataset containing 39739 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United Kingdom of Great Britain and Northern Ireland, Ireland)",
 "TaxonKey is Rattus norvegicus"
 ]
}

 The dataset includes 39739 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028142-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26030/pb29-vv83
title: Multidirectional effect of low-intensity electrical myostimulation on gene expression and phenotype in thigh and calf muscles after one week of disuse - vastus lateralis data

description: Low-intensity neuromuscular electrical stimulation (NMES) is often used as an alternative to exercise and high-intensity electrical stimulation to prevent the loss of muscle mass, strength, and endurance in spaceflight and in patients with severe chronic diseases. This study assessed the efficiency of low-intensity (~10% of maximal voluntary contraction) combined (low- and high-frequency) electrical stimulation in preventing the negative effects of weekly disuse (dry immersion without [DI, see a related dataset GSE271607] and with [DI+NMES] daily stimulation; 10 males in each group) on the strength and aerobic performance of the ankle plantar flexors and knee extensors, mitochondrial function in permeabilized muscle fibers, and the proteomic (quantitative mass spectrometry-based analysis) and transcriptomic (RNA-sequencing) profiles of the soleus muscle and vastus lateralis muscle. Application of electrical stimulation during dry immersion prevented a decrease in the maximal strength and a slight reduction in aerobic performance of knee extensors, as well as a decrease in maximal ADP-stimulated mitochondrial respiration and changes in the expression of genes encoding mitochondrial, extracellular matrix, and membrane proteins in the vastus lateralis muscle. In contrast, for the ankle plantar flexors/soleus muscle, electrical stimulation had a positive effect only on maximal mitochondrial respiration, but accelerated the decline in the maximal strength and muscle fiber cross-sectional area, which appears to be associated with the activation of genes regulating the inflammatory response. The data obtained open up broad prospects for the use of low-intensity combined electrical stimulation to prevent the negative effects of disuse for “mixed” muscles, meanwhile, the optimization of the stimulation protocol is required for “slow” muscles. Only data for vastus lateralis tissue samples are reported here. See OSD-783 for soleus tissue data.
DOI: 10.15468/dl.mvauwj
title: Occurrence Download

description: A dataset containing 47402 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ara chloropterus"
 ]
}

 The dataset includes 47402 records from 172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028146-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18686275
title: Global 250 m coral reef prioritization layer (binary selection layer), v1.0

description: DescriptionThis dataset contains the global 250 m resolution binary prioritization surface generated for the coral reef portfolio optimization analysis described in the associated manuscript. The raster identifies selected planning units resulting from the optimization framework designed to maximize climate resilience, life history representation, spatial cohesion, and risk minimization.

Each pixel represents a 250 m × 250 m grid cell (~0.003° × 0.003° at the equator). Pixel values are binary:0 = not selected1 = selected

The raster corresponds to the finalized optimization solution used in the main analysis (v1.0).

Fileprioritisations_250m.tifFormat: GeoTIFFFile size: 76 MBNumber of layers: 1

Spatial PropertiesCoordinate Reference System (CRS): WGS 84EPSG: 4326Units: degrees (longitude/latitude)Resolution: 0.003° × 0.003° (~250 m at the equator)Extent:xmin: -179.9907xmax: 179.9763ymin: -34.29605ymax: 32.51395

DimensionsRows: 22,270Columns: 119,989Total cells: 2,672,494,? (automatically defined by raster dimensions)

Data TypeSingle-band rasterValue range: 0–1Mean value: 0.3042389

InterpretationValues of 1 indicate 250 m pixels included in the optimized portfolio. Values of 0 indicate pixels not selected. The mean value reflects the proportion of reef pixels selected globally under the specified optimization constraints.

GenerationThe raster was produced using an integer programming framework and solved using Gurobi Optimizer. Input layers to the prioritization included 250 m global predictions of coral cover, life history groups, spatial cohesion, and model uncertainty. Full methodological details are provided in the associated manuscript.

Versionv1.0 – Corresponds to manuscript submission version.
DOI: 10.15468/dl.8uzn4g
title: Occurrence Download

description: A dataset containing 64309 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is CAN.1.2.12_1"
 ]
}

 The dataset includes 64309 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028118-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18686232
title: Data for: One Phenomenon, Many Hypotheses in Vadose Zone: Lagrangian Models of Coupled Non-Equilibrium Flow and Transport in 1-D Soil Column

description: This dataset contains simulation output data used to generate Figures 3–8 in the manuscript. The study compares three coupled flow–transport models for a 1-D unsaturated soil column: PE (Physical Equilibrium, Richards equation + advection–dispersion), SAMP (Subsystems and Moving Packets, Lagrangian particle framework with conductivity-ranked subsystems and interpacket diffusion), and MIPs (Multiple Interacting Pathways, Lagrangian particle framework with moisture-dependent velocity distributions and transition probability matrix). The benchmark experiment is the tritium tracer test from van Genuchten and Wierenga (1977), Experiment 5-2, using a repacked loam soil column (30 cm depth). See README.md for detailed file descriptions and column definitions.
DOI: 10.5281/zenodo.18686233
title: Data for: One Phenomenon, Many Hypotheses in Vadose Zone: Lagrangian Models of Coupled Non-Equilibrium Flow and Transport in 1-D Soil Column

description: This dataset contains simulation output data used to generate Figures 3–8 in the manuscript. The study compares three coupled flow–transport models for a 1-D unsaturated soil column: PE (Physical Equilibrium, Richards equation + advection–dispersion), SAMP (Subsystems and Moving Packets, Lagrangian particle framework with conductivity-ranked subsystems and interpacket diffusion), and MIPs (Multiple Interacting Pathways, Lagrangian particle framework with moisture-dependent velocity distributions and transition probability matrix). The benchmark experiment is the tritium tracer test from van Genuchten and Wierenga (1977), Experiment 5-2, using a repacked loam soil column (30 cm depth). See README.md for detailed file descriptions and column definitions.
DOI: 10.6084/m9.figshare.31366354
title: Sassafras Clonal Assignment: Multiple Thresholds with Ramet Size Class and Field Comments

description: This dataset was used for the creation of Figures 3 and 5. It broadly documents the clonal assignment of sampled ramets at genetic distance thresholds 0-15, of which we used TH6 for analyses and figure creation.
DOI: 10.6084/m9.figshare.31366354.v1
title: Sassafras Clonal Assignment: Multiple Thresholds with Ramet Size Class and Field Comments

description: This dataset was used for the creation of Figures 3 and 5. It broadly documents the clonal assignment of sampled ramets at genetic distance thresholds 0-15, of which we used TH6 for analyses and figure creation.
DOI: 10.15468/dl.kww5xg
title: Occurrence Download

description: A dataset containing 332891 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Mythimna pallens"
 ]
}

 The dataset includes 332891 records from 436 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028114-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/bvj-wpz-gp5
title: Veronica chamaedrys L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.wad2gm
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bos taurus",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 80 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063336-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/rn3-v2y-3qy
title: Odontites vulgaris Moench

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/cfq-2ne-nn9
title: Neottia ovata (L.) Hartm.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/dbl-87q-h7b
title: Mimosaceae R. Br.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/cv5-zzz-tgj
title: Artemisia absinthium L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/x3v-wn4-cms
title: Artemisia absinthium L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/6fq-e2y-dx9
title: Helianthemum nummularium subsp. grandiflorum (Scop.) Schinz & Thell.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.s37tsz
title: Occurrence Download

description: A dataset containing 618 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sisymbrium officinale",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 618 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063334-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/se7-637-w9s
title: Orchis mascula (L.) L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/clf-ztd-059
title: Peganum harmala L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/fad-q20-dsz
title: Galium verum L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.drhsst
title: Occurrence Download

description: A dataset containing 4044099 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((-104 17,-97 17,-97 21,-104 21,-104 17))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 4044099 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063285-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/a8r-t4q-tmg
title: Gentiana frigida Haenke

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/cd6-44f-55e
title: Euphorbia L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/pxb-mab-4nk
title: Kalimeris integrifolia Turcz. ex DC.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/bt0-wf7-pya
title: Pentanema salicinum (L.) D. Gut. Larr., Santos-Vicente, Anderb., E. Rico & M. M. Mart. Ort.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/v74-66s-lmk
title: Leucanthemum ircutianum (Turcz.) DC.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.2mpfn5
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cenchrus spinifex",
 "Country is Croatia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063335-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/676-4nh-562
title: Kernera saxatilis (L.) Sweet

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/nwm-fgc-nt2
title: Rubus L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/72k-w9r-4a6
title: Juncus squarrosus L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/kzj-e0w-t5t
title: Epipactis pontica Taubenheim

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/wqt-hqd-8cr
title: Euphrasia stricta J. P. Wolff ex J. F. Lehm.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/y9w-pse-jj4
title: Turgenia latifolia (L.) Hoffm.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/9sw-w8d-t7y
title: Saxifraga L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/jep-4bw-dr7
title: Asteraceae Dumort.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/b16-6tj-17n
title: Galium austriacum Jacq.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/l1y-42p-cdg
title: Haloxylon persicum Bunge

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/4le-qnq-krm
title: Salvia deserti Decne.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/bc8-jva-hs0
title: Lavandula coronopifolia Poir.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.rst8pa
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Luciobarbus leptopogon)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 31 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063339-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/57m-7ll-x71
title: Viola L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/db2-t1e-0cb
title: Viola canina L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/mbm-5j5-eqz
title: Cynanchum rostellatum (Turcz.) Liede & Khanum

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ncy-e01-aly
title: Arctium lappa L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/f80-h9k-l5f
title: Cleistogenes polyphylla Keng ex Keng f. & L.Liou

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/rmt-c35-42y
title: Trifolium rubens L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/8fl-xx5-qkf
title: Cotoneaster Medik.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/zfg-3me-xm2
title: Malva L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ezq-bkj-jsk
title: Aerva javanica (Burm. fil.) Juss.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/2a2-21d-bvt
title: Hedera helix L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/lbv-f88-ysd
title: Persicaria hydropiper (L.) Spach

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/04w-620-maf
title: Bartsia alpina L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/wb7-edf-lwk
title: Scrophularia scopolii Hoppe

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.ebh569
title: Occurrence Download

description: A dataset containing 232164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Fulica cristata)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 232164 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063308-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/fpf-14g-c4e
title: Iranecio B. Nord.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/h43-8rm-ktv
title: Genista tinctoria L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/75l-kzx-sr1
title: Geranium pyrenaicum Burm. f.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/9hy-fpy-m7m
title: Alkanna Tausch

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/bxs-s62-e0c
title: Onobrychis oxyodonta Boiss.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/jyk-ml3-mcn
title: Nepeta L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/40t-df9-2s7
title: Lotus corniculatus L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/zyd-p0z-k32
title: Mentha arvensis L.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/15v-wgd-pa9
title: Anthriscus nitida (Wahlenb.) Hazsl.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/93z-lra-329
title: Hypodematium glandulosopilosum (Tagawa) Ohwi

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/c37-76f-cfz
title: Allium tenuissimum L.

description: Digital Specimen for the physical specimen hosted at University of Graz.