cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7681227
title: Negative effects of the spatial clumping of thermal resources on lizard thermoregulation in a fragmented habitat

description: Abstract of the manuscript associated to this dataset: In ecosystems threatened by the expansion of croplands, habitat fragmentation and climate change, two of the main extinction drivers, may have thermoregulationmediated interacting effects on demographic trends of terrestrial ectotherms. We studied the thermal biology of a metapopulation of the widespread Mediterranean lacertid Psammodromus algirus in fragments of evergreen or deciduous oak forests interspersed among cereal fields. We obtained thermoregulation statistics (selected temperature range, body and operative temperatures, thermal quality of the habitat, and precision, accuracy, and effectiveness of thermoregulation) that could be compared among fragments and with conspecific populations living in unfragmented habitat. We also measured the selection (use vs. availability) and spatial distribution of sunlit and shaded patches used for behavioral thermoregulation in fragments, and we estimated operative temperatures and thermal habitat quality in the agricultural matrix surrounding the fragments. Variation of the thermal environment was much larger within fragments than among them, and thermoregulation was accurate, precise, and efficient throughout the fragmented landscape; its effectiveness was similar to that of previously studied unfragmented populations. The average distance between sunlit and shaded patches was shorter in deciduous than in evergreen fragments, producing a more clumped distribution of the mosaic of thermal resources. Consequently, in evergreen habitat the cost of thermoregulation was higher, because lizards were more selective in their choice of sunlit sites (they used sunlit patches closer to shade and refuge than expected at random, and the extent of such selection was larger than at deciduous habitat). Temperatures available in croplands were too high to allow lizard dispersal, at least in the post-breeding season. This result confirms the role of croplands as a thermal barrier that promotes inbreeding in isolated fragments, and it forecasts a dark future for populations of forest lizards in agricultural landscapes under the combined effects of habitat fragmentation and global warming.
DOI: 10.5281/zenodo.7681226
title: Negative effects of the spatial clumping of thermal resources on lizard thermoregulation in a fragmented habitat

description: Abstract of the manuscript associated to this dataset: In ecosystems threatened by the expansion of croplands, habitat fragmentation and climate change, two of the main extinction drivers, may have thermoregulationmediated interacting effects on demographic trends of terrestrial ectotherms. We studied the thermal biology of a metapopulation of the widespread Mediterranean lacertid Psammodromus algirus in fragments of evergreen or deciduous oak forests interspersed among cereal fields. We obtained thermoregulation statistics (selected temperature range, body and operative temperatures, thermal quality of the habitat, and precision, accuracy, and effectiveness of thermoregulation) that could be compared among fragments and with conspecific populations living in unfragmented habitat. We also measured the selection (use vs. availability) and spatial distribution of sunlit and shaded patches used for behavioral thermoregulation in fragments, and we estimated operative temperatures and thermal habitat quality in the agricultural matrix surrounding the fragments. Variation of the thermal environment was much larger within fragments than among them, and thermoregulation was accurate, precise, and efficient throughout the fragmented landscape; its effectiveness was similar to that of previously studied unfragmented populations. The average distance between sunlit and shaded patches was shorter in deciduous than in evergreen fragments, producing a more clumped distribution of the mosaic of thermal resources. Consequently, in evergreen habitat the cost of thermoregulation was higher, because lizards were more selective in their choice of sunlit sites (they used sunlit patches closer to shade and refuge than expected at random, and the extent of such selection was larger than at deciduous habitat). Temperatures available in croplands were too high to allow lizard dispersal, at least in the post-breeding season. This result confirms the role of croplands as a thermal barrier that promotes inbreeding in isolated fragments, and it forecasts a dark future for populations of forest lizards in agricultural landscapes under the combined effects of habitat fragmentation and global warming.
DOI: 10.5281/zenodo.5525989
title: Public MetaPath database (EFSA project)

description: This MTB file contains a collection of maps publicly available that can be used with the MetaPath platform to search and analyse experimental data on metabolism or catabolism. For more details and background information please consult EFSA website <strong>Intellectual Property Rights Notice</strong> The reproduction, distribution, redistribution, exploiting, making commercial or further use of information, documents and data posted or otherwise made available on this website or in the websites linked to it may be subject to protection under intellectual property rights regulations, data exclusivity clauses or other applicable law, and their utilisation without obtaining the prior permission from the right(s)holder(s) of the respective information, documents and data might violate the pre-existing rights of the respective right(s)holder(s). For materials subject to intellectual property rights or other rights of a third party, the User must comply with the terms of use associated with such material or obtain the necessary and written permission for reproduction, distribution or any other use from the right(s)holder(s). EFSA does not accept any responsibility, and shall not be held liable, for any violation of any pre-existing rights or other infringements related to information, documents and data made available on this website or in the websites linked to it.
description: IT; MTB; pesticides.MRL@efsa.europa.eu
DOI: 10.5281/zenodo.7674871
title: EFSA's Public MetaPath database

description: This MTB file contains a collection of maps publicly available that can be used with the MetaPath platform to search and analyse experimental data on metabolism or catabolism. The External Scientific Report by EFSA's contractor, the German Federal Institute for Risk Assessment (BfR), describes how the extraction and coding of the data on which this database was based was conducted. For more details and background information please consult EFSA website <strong>Intellectual Property Rights Notice</strong> The reproduction, distribution, redistribution, exploiting, making commercial or further use of information, documents and data posted or otherwise made available on this website or in the websites linked to it may be subject to protection under intellectual property rights regulations, data exclusivity clauses or other applicable law, and their utilisation without obtaining the prior permission from the right(s)holder(s) of the respective information, documents and data might violate the pre-existing rights of the respective right(s)holder(s). For materials subject to intellectual property rights or other rights of a third party, the User must comply with the terms of use associated with such material or obtain the necessary and written permission for reproduction, distribution or any other use from the right(s)holder(s). EFSA does not accept any responsibility, and shall not be held liable, for any violation of any pre-existing rights or other infringements related to information, documents and data made available on this website or in the websites linked to it.
description: IT; MTB; pesticides.MRL@efsa.europa.eu
DOI: 10.5281/zenodo.4601173
title: EFSA's Public MetaPath database

description: This MTB file contains a collection of maps publicly available that can be used with the MetaPath platform to search and analyse experimental data on metabolism or catabolism. The External Scientific Report by EFSA's contractor, the German Federal Institute for Risk Assessment (BfR), describes how the extraction and coding of the data on which this database was based was conducted. For more details and background information please consult EFSA website <strong>Intellectual Property Rights Notice</strong> The reproduction, distribution, redistribution, exploiting, making commercial or further use of information, documents and data posted or otherwise made available on this website or in the websites linked to it may be subject to protection under intellectual property rights regulations, data exclusivity clauses or other applicable law, and their utilisation without obtaining the prior permission from the right(s)holder(s) of the respective information, documents and data might violate the pre-existing rights of the respective right(s)holder(s). For materials subject to intellectual property rights or other rights of a third party, the User must comply with the terms of use associated with such material or obtain the necessary and written permission for reproduction, distribution or any other use from the right(s)holder(s). EFSA does not accept any responsibility, and shall not be held liable, for any violation of any pre-existing rights or other infringements related to information, documents and data made available on this website or in the websites linked to it.
description: IT; MTB; pesticides.MRL@efsa.europa.eu
DOI: 10.5281/zenodo.7669301
title: Data from: Balanced replacement of fish meal with Hermetia illucens meal allows efficient hepatic nutrient metabolism and increased fillet lipid quality in gilthead sea bream (Sparus aurata) juveniles

description: In the present study, gilthead sea bream (<em>Sparus aurata</em>) juveniles were reared using sustainable feeds containing insect meal from <em>Hermetia illucens</em> larvae and poultry by-products meal. Proteomics and Proton Nuclear Magnetic Resonance-based metabolomics analysis were used to assess the metabolic impact of tested dietary formulations in sea bream liver, whereas the composition of muscle fillet was characterized by means of metabolomics and gas chromatography of fatty acids methyl esters. Replacing fish meal with insect meal in a 5% fish meal diet did not substantially alter metabolism of dietary nutrients, leading to small but statistically detectable effects solely on lauric acid content of sea bream fillet, and few alterations in some markers of immune response, such as leukocyte elastase inhibitor-like, granzyme B (G,H)-like, and two associated ortholog groups namely serpin B, and chymase). Liver morphology confirmed the absence of structural damage or inflammation in the insect meal-fed group, which showed a lower amount of hepatic lipid deposition and accumulation, too.
DOI: 10.5281/zenodo.7669302
title: Data from: Balanced replacement of fish meal with Hermetia illucens meal allows efficient hepatic nutrient metabolism and increased fillet lipid quality in gilthead sea bream (Sparus aurata) juveniles

description: In the present study, gilthead sea bream (<em>Sparus aurata</em>) juveniles were reared using sustainable feeds containing insect meal from <em>Hermetia illucens</em> larvae and poultry by-products meal. Proteomics and Proton Nuclear Magnetic Resonance-based metabolomics analysis were used to assess the metabolic impact of tested dietary formulations in sea bream liver, whereas the composition of muscle fillet was characterized by means of metabolomics and gas chromatography of fatty acids methyl esters. Replacing fish meal with insect meal in a 5% fish meal diet did not substantially alter metabolism of dietary nutrients, leading to small but statistically detectable effects solely on lauric acid content of sea bream fillet, and few alterations in some markers of immune response, such as leukocyte elastase inhibitor-like, granzyme B (G,H)-like, and two associated ortholog groups namely serpin B, and chymase). Liver morphology confirmed the absence of structural damage or inflammation in the insect meal-fed group, which showed a lower amount of hepatic lipid deposition and accumulation, too.
DOI: 10.5281/zenodo.7681240
title: Data from: Balanced replacement of fish meal with Hermetia illucens meal allows efficient hepatic nutrient metabolism and increased fillet lipid quality in gilthead sea bream (Sparus aurata) juveniles

description: In the present study, gilthead sea bream (<em>Sparus aurata</em>) juveniles were reared using sustainable feeds containing insect meal from <em>Hermetia illucens</em> larvae and poultry by-products meal. Proteomics and Proton Nuclear Magnetic Resonance-based metabolomics analysis were used to assess the metabolic impact of tested dietary formulations in sea bream liver, whereas the composition of muscle fillet was characterized by means of metabolomics and gas chromatography of fatty acids methyl esters. Replacing fish meal with insect meal in a 5% fish meal diet did not substantially alter metabolism of dietary nutrients, leading to small but statistically detectable effects solely on lauric acid content of sea bream fillet, and few alterations in some markers of immune response, such as leukocyte elastase inhibitor-like, granzyme B (G,H)-like, and two associated ortholog groups namely serpin B, and chymase). Liver morphology confirmed the absence of structural damage or inflammation in the insect meal-fed group, which showed a lower amount of hepatic lipid deposition and accumulation, too.
DOI: 10.25955/22179796
title: Datasets

description: Datasets used for RE (Relation Extraction) <br> LLL IEPA HPRD50 BioInfer <br> LLL Abstracts E_Coli RegulonDB Abstracts
DOI: 10.5522/04/22132580
title: Data underlying Figure 1 in the paper 'Topological states in honeycomb arrays of implanted acceptors in semiconductors'

description: FIg 1(a): each line consists of a list of comma-separated 8-tuples corresponding to the eight eigenvalues of the tight-binding Hamiltonian at a particular k-point. The eigenvalues are given on an array of 573 k-points uniformly spaced along the path Gamma-M-K-Gamma in the Brillouin zone, and then in an outermost loop the anistropy parameter delta is varied from 0.0 to 1.0 in steps of 0.2 (six values in all). <br> Fig 1(b): CSV file with each line contatining 96 comma-separated eigenvalues for the 24-atom wide strip with an armchair edge. The 2001 rows correspond to an array of k-points in the edge direction equally spaced from -pi to pi with an increment pi/1000. <br>
DOI: 10.5522/04/22132580.v1
title: Data underlying Figure 1 in the paper 'Topological states in honeycomb arrays of implanted acceptors in semiconductors'

description: FIg 1(a): each line consists of a list of comma-separated 8-tuples corresponding to the eight eigenvalues of the tight-binding Hamiltonian at a particular k-point. The eigenvalues are given on an array of 573 k-points uniformly spaced along the path Gamma-M-K-Gamma in the Brillouin zone, and then in an outermost loop the anistropy parameter delta is varied from 0.0 to 1.0 in steps of 0.2 (six values in all). <br> Fig 1(b): CSV file with each line contatining 96 comma-separated eigenvalues for the 24-atom wide strip with an armchair edge. The 2001 rows correspond to an array of k-points in the edge direction equally spaced from -pi to pi with an increment pi/1000. <br>
DOI: 10.6084/m9.figshare.21175129.v1
title: Great Apes Reinstate an Interrupted Triadic Game: A Comparison Across Age and Species

description: When humans engage in joint action, they do so with an underlying sense of joint commitment, a feeling of mutual obligation towards their partner and the shared goal. Whether our closest living relatives, the great apes, experience and understand joint actions in the same way is subject to debate. Crucial evidence concerns how participants respond to interruptions of joint actions, particularly if they protest or attempt to reengage their reluctant or distracted partners. During dyadic interactions, great apes appear to have some sense of joint commitment, according to recent studies, but data are inconsistent for triadic games with artefacts. We addressed this issue by engaging <em>N</em>=23 apes (5 adult chimpanzees, 5 infant bonobos, 13 adult bonobos) in a “tug-of-war” game with a human experimenter who abruptly stopped playing. Adult apes readily attempted to reengage the experimenter, with no species differences. Older bonobos showed more reengagement attempts with more game-related behaviours than younger bonobos, which might explain negative results of earlier research. Great apes may thus have motivational foundations for joint commitment experienced by humans, but this capacity might develop only later in life. We discuss this finding in relation to evolutionary and developmental theories on shared intentionality.
DOI: 10.5522/04/22109162
title: Data underlying Figure 2 in the paper 'Topological states in honeycomb arrays of implanted acceptors in semiconductors'

description: Data underlying FIgure 2. For parts (a) to (d) format is: csv file with each line containiing a triple (delta, U, quantiy - where quantity is the quadrupole moment Q, the magnetization m, the auxiliary polarization p or the single-particle energy gap). For part (e) and (f) format is a csv file with each line containing a row of 96 eigenvalues on a uniformly spaced k-point grid from -pi to pi.
DOI: 10.5522/04/22109162.v1
title: Data underlying Figure 2 in the paper 'Topological states in honeycomb arrays of implanted acceptors in semiconductors'

description: Data underlying FIgure 2. For parts (a) to (d) format is: csv file with each line containiing a triple (delta, U, quantiy - where quantity is the quadrupole moment Q, the magnetization m, the auxiliary polarization p or the single-particle energy gap). For part (e) and (f) format is a csv file with each line containing a row of 96 eigenvalues on a uniformly spaced k-point grid from -pi to pi.
DOI: 10.5517/ccdc.csd.cc2bvsjj
title: CCDC 2170698: Experimental Crystal Structure Determination

description: Related Article: Preeti Oswal, Aayushi Arora, Suraj Purohit, Anurag Bahuguna, Pankaj Sharma, Jiben Roy, Arun Kumar|2023|New J.Chem.|47|4346|doi:10.1039/D2NJ04408K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bw5kz
title: CCDC 2171071: Experimental Crystal Structure Determination

description: Related Article: Preeti Oswal, Aayushi Arora, Suraj Purohit, Anurag Bahuguna, Pankaj Sharma, Jiben Roy, Arun Kumar|2023|New J.Chem.|47|4346|doi:10.1039/D2NJ04408K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2chhm0
title: CCDC 2189642: Experimental Crystal Structure Determination

description: Related Article: Jin Tong, Li-Rong Zhao, Jin Zhang, Xia-Yan Wang, Yan-Min Yu, Shu-Yan Yu|2023|New J.Chem.|47|4374|doi:10.1039/D2NJ05408F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bftxj
title: CCDC 2158248: Experimental Crystal Structure Determination

description: Related Article: Jin Tong, Li-Rong Zhao, Jin Zhang, Xia-Yan Wang, Yan-Min Yu, Shu-Yan Yu|2023|New J.Chem.|47|4374|doi:10.1039/D2NJ05408F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bftyk
title: CCDC 2158249: Experimental Crystal Structure Determination

description: Related Article: Jin Tong, Li-Rong Zhao, Jin Zhang, Xia-Yan Wang, Yan-Min Yu, Shu-Yan Yu|2023|New J.Chem.|47|4374|doi:10.1039/D2NJ05408F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bftzl
title: CCDC 2158250: Experimental Crystal Structure Determination

description: Related Article: Jin Tong, Li-Rong Zhao, Jin Zhang, Xia-Yan Wang, Yan-Min Yu, Shu-Yan Yu|2023|New J.Chem.|47|4374|doi:10.1039/D2NJ05408F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f12l5
title: CCDC 2235366: Experimental Crystal Structure Determination

description: Related Article: Petr Vosáhlo, Petr Štěpnička|2023|New J.Chem.|47|4510|doi:10.1039/D3NJ00201B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f12n7
title: CCDC 2235368: Experimental Crystal Structure Determination

description: Related Article: Petr Vosáhlo, Petr Štěpnička|2023|New J.Chem.|47|4510|doi:10.1039/D3NJ00201B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f12p8
title: CCDC 2235369: Experimental Crystal Structure Determination

description: Related Article: Petr Vosáhlo, Petr Štěpnička|2023|New J.Chem.|47|4510|doi:10.1039/D3NJ00201B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f12q9
title: CCDC 2235370: Experimental Crystal Structure Determination

description: Related Article: Petr Vosáhlo, Petr Štěpnička|2023|New J.Chem.|47|4510|doi:10.1039/D3NJ00201B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.