cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.mxjhpb
title: Occurrence Download

description: A dataset containing 1292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calidris temminckii",
 "HasCoordinate is true",
 "Country is Türkiye"
 ]
}

 The dataset includes 1292 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028819-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7teqzm
title: Occurrence Download

description: A dataset containing 99196 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Accipiter gentilis (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Year is greater than 1989",
 "Year is less than 2026",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is Absent"
 ]
 }
 },
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 99196 records from 346 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002163-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aw5r2d
title: Occurrence Download

description: A dataset containing 27653 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynomys Rafinesque, 1817"
 ]
}

 The dataset includes 27653 records from 156 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002173-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h4p4ts
title: Occurrence Download

description: A dataset containing 2155 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyanocorax dickeyi R.T.Moore, 1935"
 ]
}

 The dataset includes 2155 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078542-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8715691
title: US Cities Urban Connectivity
DOI: 10.6084/m9.figshare.24603129.v2
title: Model

description: These are the model files that have been trained in the paper, unzipped in the same directory as the code and use them, see the github site for steps on how to use them https://github.com/TimE9527/stDGCC
DOI: 10.15468/dl.s8xkyk
title: Occurrence Download

description: A dataset containing 10456 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Potentilla micrantha Ramond ex DC.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10456 records from 213 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078543-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tx3uku
title: Occurrence Download

description: A dataset containing 2155 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyanocorax dickeyi R.T.Moore, 1935"
 ]
}

 The dataset includes 2155 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078545-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uwyjgm
title: Occurrence Download

description: A dataset containing 32646 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melanerpes pygmaeus (Ridgway, 1885)"
 ]
}

 The dataset includes 32646 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078544-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.csarbg
title: Occurrence Download

description: A dataset containing 114053 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Spergularia rubra (L.) J.Presl & C.Presl)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 114053 records from 1168 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078528-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ymuxtf
title: Occurrence Download

description: A dataset containing 1530 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Potentilla hippiana Lehm.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1530 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078546-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mg4zb4
title: Occurrence Download

description: A dataset containing 3651 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Spergularia diandra (Guss.) Heldr.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3651 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078547-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r36dy7
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amaranthus spinosus",
 "Country is Viet Nam",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085552-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bgwn7y
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Monomorium destructor",
 "Country is Cook Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085553-250717081556266/datasets/export for details.
DOI: 10.5281/zenodo.16616204
title: BeeSAM2: Image data
DOI: 10.5281/zenodo.16616205
title: BeeSAM2: Image data
DOI: 10.15468/dl.n3jk6z
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Oxycaryum cubense (Poepp. & Kunth) Palla"
 ]
}

 The dataset includes 83 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000295-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28856963
title: Angela you are 'unacceptable'... Reddit Comments

description: Comments scraped from the post, "Angela You Are 'Unacceptable'..."<br>https://www.reddit.com/r/90DayFiance/comments/1etffuc/angela_you_are_unacceptable_shes_suing_him/
DOI: 10.15468/dl.4umqgt
title: Occurrence Download

description: A dataset containing 20250 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EMBRAPA FLORESTAS | Soil macrofauna communities in various land use systems in Jaguapitã, Paraná, Brazil"
 ]
}

 The dataset includes 20250 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028832-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13144/lil-1023
title: Enquête Ménages Déplacements (EMD), Lyon / Aire métropolitaine lyonnaise - 2015

description: L'Enquête Ménages Déplacements Lyon 2015, réalisée selon la méthodologie nationale élaborée par le CERTU,  est une EDGT (enquête déplacements grands territoires) qui porte donc sur un territoire s'étendant sur 3 départements (Rhône, Ain et Isère) et divisé en 2 parties. La première, comprenant 123 communes (dont l'agglomération lyonnaise) pour une population de 1 542 000 habitants, a fait l'objet d'une enquête en face à face. La deuxième partie, composée de 446 communes (pour une population de 750 000 habitants), a été enquêtée par téléphone.Cette enquête permet de connaître la mobilité, restreinte aux jours ouvrables, des individus de 5 ans et plus  qui appartiennent à un ménage résidant dans les 569 communes de la zone d'étude. Les 16 361 ménages enquêtés sont caractérisés par leur lieu de résidence et le parc de voitures particulières et de 2-roues à leur disposition. Les 28 230 individus interrogés l'ont principalement été sur leurs caractéristiques socio-démographiques et leur utilisation des modes de transport (individuels et collectifs). Des 99 585 déplacements, on connaît leurs heures et lieux de départ et d'arrivée, leur distance, leur durée, leur motif et le nombre de trajets (en mode mécanisé). Les 77 314 trajets sont décrits par leur mode de transport, les lieux de départ et d'arrivée, le temps de marche à pied au départ et à l'arrivée... Enfin, 9 743 individus ont donné leur avis sur la vie locale, les modes de transport dont le covoiturage et les améliorations possibles en matière de transport.
DOI: 10.15468/dl.epr7fx
title: Occurrence Download

description: A dataset containing 10791 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Hyacinthoides non-scripta (L.) Chouard ex Rothm., Hyacinthoides hispanica (Mill.) Rothm.)",
 "Year 2021-2025"
 ]
}

 The dataset includes 10791 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028833-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.puphua
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Cabassous centralis (Miller, 1899)"
 ]
}

 The dataset includes 28 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028834-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ey3x43
title: Occurrence Download

description: A dataset containing 23453832 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cardinalis cardinalis (Linnaeus, 1758)"
 ]
}

 The dataset includes 23453832 records from 234 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028794-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wng6q
title: Occurrence Download

description: A dataset containing 986586 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Calidris alpina (Linnaeus, 1758)",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 986586 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028827-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13144/lil-1024
title: Enquête Ménages Déplacements (EMD), Nantes / Loire Atlantique - 2015

description: L'Enquête Ménages Déplacements "Nantes / Loire Atlantique 2015", réalisée selon la méthodologie nationale élaborée par le CERTU,  est une EDGT (enquête déplacements grands territoires) qui porte donc sur un territoire divisé en 2 parties. La première, comprenant 39 communes autour de Nantes et Saint-Nazaire (pour une population de 787 200 habitants), a fait l'objet d'une enquête en face à face. La deuxième partie, composée de 191 communes (essentiellement les 182 autres communes de Loire-Atlantique), pour une population de 588 700 habitants, a été enquêtée par téléphone.Cette enquête permet de connaître la mobilité, restreinte aux jours ouvrables, des individus (de 5 ans et plus) qui appartiennent à un ménage résidant dans les 230 communes de la zone d'étude. Les 12 722 ménages enquêtés sont caractérisés par leur lieu de résidence et les voitures, 2-3 roues motorisés et vélos à leur disposition. Les 20 799 individus interrogés l'ont principalement été sur leurs caractéristiques socio-démographiques et leur utilisation des modes de transport (individuels et collectifs). Des 81 924 déplacements, on connaît leurs heures et lieux de départ et d'arrivée, leur distance, leur durée, leur motif et le nombre de trajets (en mode mécanisé). Les 67 898 trajets sont décrits par leur mode de transport, les lieux de départ et d'arrivée, le temps de marche à pied au départ et à l'arrivée... Enfin, 6 112 individus ont donné leur avis sur la vie locale, les déplacements et les modes de transport ; ils ont aussi décrits leurs déplacements du week-end précédent.
DOI: 10.15468/dl.nwqwne
title: Occurrence Download

description: A dataset containing 10982 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spizaetus melanoleucus (Vieillot, 1816)"
 ]
}

 The dataset includes 10982 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028835-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p1bi62ny
title: Estimated Annual Recharge to the Edwards Aquifer in the San Antonio Area, by Stream Basin or Ungaged Area, 1934–2024

description: The Edwards aquifer in south-central Texas is one of the most permeable and productive aquifers in the United States and is the major source of public water supply for Bexar, Comal, Hays, Medina, and Uvalde Counties. The Edwards aquifer also supplies large quantities of water for use in agriculture, business, and industry in the region. The major artesian springs of the Edwards aquifer provide water for recreational activities, businesses, and downstream users, and provide habitat for several threatened or endangered species. The areas pertinent to the recharge process are the catchment area and the recharge zone. The catchment area consists of the parts of river basins upstream from the recharge zone. Streams in the catchment area generally gain water as they flow toward the recharge zone. As the streams flow across the recharge zone, which is essentially the outcrop of the Edwards aquifer, they lose substantial amounts of water through infiltration into the highly permeable, faulted and fractured rocks of the outcrop. Direct infiltration of rainfall also occurs in the interstream areas within the recharge zone. Annual recharge estimates are based on data collected from a network of U.S. Geological Survey (USGS) streamflow-gaging stations at sites upstream and downstream from the recharge zone and on assumptions related to applying runoff characteristics from gaged areas to ungaged areas, Puente (1978). Runoff is affected by the distribution of rainfall, which historically has been estimated from a network of rain gages, some operated by the USGS, some by the Edwards Aquifer Authority (EAA), and some by the National Weather Service. Since 2004, the distribution of rainfall has been estimated from calibrated NEXRAD (NEXt-generation weather RADar) data provided by the EAA. The annual estimation of recharge to the Edwards aquifer is part of a continuing program of the USGS in cooperation with the Edwards Aquifer Authority. This data release is formatted as a tab-delimited file (.txt) that contains the estimated annual recharge to the Edwards aquifer for 1934 through 2024. The estimated annual recharge is divided into eight major river basins within the catchment area and for some of those basins will also include estimates of recharge from adjacent ungaged areas.
DOI: 10.5281/zenodo.15398036
title: Dataset Supporting Publication: A Curated Geospatial Dataset of Chemicals Used in Hydraulic Fracturing and their Functions

description: Dataset Files Supporting the publication: A Curated Geospatial Dataset of Chemicals Used in Hydraulic Fracturing and their Functions. 

Kristin K. Isaacs1,*, Antony J. Williams1, Katherine Phillips1, Michael Jayne2, and Sean Thimons2

1. Center for Computational Toxicology and Exposure, Office of Research and Development, United States Environmental Protection Agency, 109 T.W. Alexander Drive, P.O. Box 12055, Research Triangle Park, NC 27711 

2. Center for Environmental Solutions and Emergency Response, Office of Research and Development, United States Environmental Protection Agency, 26 Martin Luther King Dr W, Cincinnati, OH 45220 

*Corresponding author

Submitted for publication as of 5/13/2025. 

Abstract:

Produced water is wastewater generated by the oil and gas industry as a byproduct of conventional extraction and hydraulic fracturing activities. Chemicals used in HF may affect PW quality and must be evaluated for risk to humans and ecological species when considering the conditions of PW reuse. FracFocus is a public database of chemicals used in HF where operators of wells report information either voluntarily or as mandated under specific state statutes. However, data reported to FF is not standardized in terms of either chemical identifier or chemical function during HF. Here, we develop and provide a curated geospatial database of chemicals used in HF and reported to FF, harmonized to standard chemical identifiers and function categories used by the U.S. Environmental Protection Agency, which facilitates direct linkage to its chemical exploration tools such as the CompTox Chemicals Dashboard. This harmonized dataset provides an enhanced resource to risk assessors and environmental programs when evaluating the potential impact of HF chemicals in PW reuse.

Associated code available at: https://github.com/HumanExposure/ProducedWaterCuration

Included files:

FFfinalcurateddata.rds: Final dataset of curated chemical and function records in R RDS format

FFfinalcurateddata.zip: Final dataset of curated chemical and function records in CSV format (compressed)

LargeInputandIntermediateFiles.zip: large input and intermediate files required to produce dataset with code code provided at linked repository

Disclaimer:

The United States Environmental Protection Agency, through its Office of Research and Development, funded and managed the research and data described here. e data included herein do not represent and should not be construed to represent any Agency determination or policy. Further, any reference to commercial products or services does not constitute endorsement. The referenced manuscript has been subject to Agency review and approved for publication.
DOI: 10.5281/zenodo.14950403
title: Metalloproteome and Global Proteome of Pseudomonas aeruginosa under oxic and anoxic conditions

description: The metalloproteomic dataset associated with the Pseudomonas aeruginosa, strain 2-54, grown under oxic and anoxic conditions. A 2D native separation was conducted using the methods of Mazzotta et al., 2020 (Metallomics), followed by metal and protein dual mass spectrometry approaches. Separate CSV files are included for metals asd proteins for the oxic and anoxic treatments.  Metals are in units of ppb and proteins in spectral counts. The data were visualized using a Metalloproteomics viewer available on Github. Note that blank data fields are included in CSV, to allow for complete 2D chromatographic matrix and to enable ease of visualization and analysis. A global proteome (pao_df.csv) is also included with technical triplicates, with average and standard deviation, for oxic and anoxic conditions, in units of spectral counts. The resulting data have been described in publication Saito and McIlvin 2025.
DOI: 10.5281/zenodo.14950404
title: Metalloproteome of Pseudomonas aeruginosa under oxic and anoxic conditions

description: The metalloproteomic dataset associated with the Pseudomonas aeruginosa, strain 2-54, grown under oxic and anoxic conditions. A 2D native separation was conducted using the methods of Mazzotta et al., 2020 (Metallomics), followed by metal and protein dual mass spectrometry approaches. The resulting data have been described in publication Saito and McIlvin 2025. The data were visualized using a Metalloproteomics viewer available on Github. Note that blank data fields are included in CSV, to allow for complete 2D chromatographic matrix and to enable ease of visualization and analysis.
DOI: 10.5281/zenodo.15115169
title: Metalloproteome of Pseudomonas aeruginosa under oxic and anoxic conditions

description: The metalloproteomic dataset associated with the Pseudomonas aeruginosa, strain 2-54, grown under oxic and anoxic conditions. A 2D native separation was conducted using the methods of Mazzotta et al., 2020 (Metallomics), followed by metal and protein dual mass spectrometry approaches. The resulting data have been described in publication Saito and McIlvin 2025. The data were visualized using a Metalloproteomics viewer available on Github. Note that blank data fields are included in CSV, to allow for complete 2D chromatographic matrix and to enable ease of visualization and analysis.
DOI: 10.5281/zenodo.15336746
title: Metalloproteome and Global Proteome of Pseudomonas aeruginosa under oxic and anoxic conditions

description: The metalloproteomic dataset associated with the Pseudomonas aeruginosa, strain 2-54, grown under oxic and anoxic conditions. A 2D native separation was conducted using the methods of Mazzotta et al., 2020 (Metallomics), followed by metal and protein dual mass spectrometry approaches. Separate CSV files are included for metals asd proteins for the oxic and anoxic treatments.  Metals are in units of ppb and proteins in spectral counts. The data were visualized using a Metalloproteomics viewer available on Github. Note that blank data fields are included in CSV, to allow for complete 2D chromatographic matrix and to enable ease of visualization and analysis. A global proteome (pao_df.csv) is also included with technical triplicates, with average and standard deviation, for oxic and anoxic conditions, in units of spectral counts. The resulting data have been described in publication Saito and McIlvin 2025.
DOI: 10.15468/dl.62mt98
title: Occurrence Download

description: A dataset containing 50976 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-100.714 21.135,-99.671 21.135,-99.671 21.687,-100.714 21.687,-100.714 21.135))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 50976 records from 236 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028802-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26030/hjw6-kp78
title: Microbiological and nutritional analysis of lettuce crops grown on the International Space Station-VEG01B

description: Lettuce crops grown in the Veggie payload aboard ISS, harvested and returned for chemical, microbiological and molecular analysis
DOI: 10.34740/kaggle/dsv/11800830
title: vehicles in China