cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7028969.v1
title: Pulse-shift gradient flow experiments

description: A set of pulse-shift gradient flow experiments
DOI: 10.6084/m9.figshare.7028801
title: Post-processed simulation results (2/2)

description: Post-processed simulation results from supplementary material.
DOI: 10.6084/m9.figshare.7028801.v1
title: Post-processed simulation results (2/2)

description: Post-processed simulation results from supplementary material.
DOI: 10.6084/m9.figshare.7028795
title: Post-processed simulation results (1/2)

description: Post-processed simulation results from manuscript.
DOI: 10.6084/m9.figshare.7028516
title: Dataset biomarkers

description: Data on 51 biomarkers collected in a time span of 5 years (2004 - 2009) for 93 patients in an European hospital. For a description of the biomarkers see https://doi.org/10.6084/m9.figshare.7028480.v1<br><br>If you use this dataset/KB, please cite the following articles:<br><br>Rizzo L., Majnaric L., Dondio P., Longo L. (2018) An Investigation of Argumentation Theory for the Prediction of Survival in Elderly Using Biomarkers. In: Iliadis L., Maglogiannis I., Plagianakos V. (eds) Artificial Intelligence Applications and Innovations. AIAI 2018. IFIP Advances in Information and Communication Technology, vol 519. Springer, Cham<br><br>Rizzo L., Majnaric L., Longo L. (2018) A Comparative Study of Defeasible Argumentation and Non-monotonic Fuzzy Reasoning for Elderly Survival Prediction Using Biomarkers. In: Ghidini C., Magnini B., Passerini A., Traverso P. (eds) AI*IA 2018 – Advances in Artificial Intelligence. AI*IA 2018. Lecture Notes in Computer Science, vol 11298. Springer, Cham
DOI: 10.6084/m9.figshare.7028795.v1
title: Post-processed simulation results (1/2)

description: Post-processed simulation results from manuscript.
DOI: 10.6084/m9.figshare.7028480
title: Fuzzy Knowledge-base - Mortality risk factors in community dwelling elderly

description: Fuzzy Knowledge-base for 51 different biomarkers and their association with mortality risk factors in community dwelling elderly<br><br>If you use this dataset/KB, please cite the following articles:<br><br>Rizzo L., Majnaric L., Dondio P., Longo L. (2018) An Investigation of Argumentation Theory for the Prediction of Survival in Elderly Using Biomarkers. In: Iliadis L., Maglogiannis I., Plagianakos V. (eds) Artificial Intelligence Applications and Innovations. AIAI 2018. IFIP Advances in Information and Communication Technology, vol 519. Springer, Cham<br><br>Rizzo L., Majnaric L., Longo L. (2018) A Comparative Study of Defeasible Argumentation and Non-monotonic Fuzzy Reasoning for Elderly Survival Prediction Using Biomarkers. In: Ghidini C., Magnini B., Passerini A., Traverso P. (eds) AI*IA 2018 – Advances in Artificial Intelligence. AI*IA 2018. Lecture Notes in Computer Science, vol 11298. Springer, Cham<br>
DOI: 10.6084/m9.figshare.7028480.v1
title: Fuzzy Knowledge-base - Mortality risk factors in community dwelling elderly

description: Fuzzy Knowledge-base for 51 different biomarkers and their association with mortality risk factors in community dwelling elderly<br><br>If you use this dataset/KB, please cite the following articles:<br><br>Rizzo L., Majnaric L., Dondio P., Longo L. (2018) An Investigation of Argumentation Theory for the Prediction of Survival in Elderly Using Biomarkers. In: Iliadis L., Maglogiannis I., Plagianakos V. (eds) Artificial Intelligence Applications and Innovations. AIAI 2018. IFIP Advances in Information and Communication Technology, vol 519. Springer, Cham<br><br>Rizzo L., Majnaric L., Longo L. (2018) A Comparative Study of Defeasible Argumentation and Non-monotonic Fuzzy Reasoning for Elderly Survival Prediction Using Biomarkers. In: Ghidini C., Magnini B., Passerini A., Traverso P. (eds) AI*IA 2018 – Advances in Artificial Intelligence. AI*IA 2018. Lecture Notes in Computer Science, vol 11298. Springer, Cham<br>
DOI: 10.6084/m9.figshare.7028471
title: Source code to reproduce all findings from Estimating statistical power, posterior probability and publication bias of psychological research using the observed replication rate

description: In this paper, we show how Bayes' theorem can be used to better understand the implications of the 36% reproducibility rate of published psychological findings reported by the Open Science Collaboration. We demonstrate a method to assess publication bias and show that the observed reproducibility rate was not consistent with an unbiased literature. We estimate a plausible range for the prior probability of this body of research, suggesting expected statistical power in the original studies of 48–75%, producing (positive) findings that were expected to be true 41–62% of the time. Publication bias was large, assuming a literature with 90% positive findings, indicating that negative evidence was expected to have been observed 55–98 times before one negative result was published. These findings imply that even when studied associations are truly NULL, we expect the literature to be dominated by statistically significant findings.
DOI: 10.6084/m9.figshare.7028471.v1
title: Source code to reproduce all findings from Estimating statistical power, posterior probability and publication bias of psychological research using the observed replication rate

description: In this paper, we show how Bayes' theorem can be used to better understand the implications of the 36% reproducibility rate of published psychological findings reported by the Open Science Collaboration. We demonstrate a method to assess publication bias and show that the observed reproducibility rate was not consistent with an unbiased literature. We estimate a plausible range for the prior probability of this body of research, suggesting expected statistical power in the original studies of 48–75%, producing (positive) findings that were expected to be true 41–62% of the time. Publication bias was large, assuming a literature with 90% positive findings, indicating that negative evidence was expected to have been observed 55–98 times before one negative result was published. These findings imply that even when studied associations are truly NULL, we expect the literature to be dominated by statistically significant findings.
DOI: 10.6084/m9.figshare.7028387
title: RESULTS

description: Numerical results <br>
DOI: 10.6084/m9.figshare.7028384
title: CODE PLOTTING

description: Python 2.7 scripts for plotting results<br>
DOI: 10.6084/m9.figshare.7028387.v2
title: RESULTS

description: Numerical results <br>
DOI: 10.6084/m9.figshare.7028387.v1
title: RESULTS

description: Numerical results <br>
DOI: 10.6084/m9.figshare.7028345
title: L2-L4 thin-film terracing numerical simulations

description: Gradient flow numerical experiments to investigate time evolution of L2-L4 thin-film terracing scenarios.
DOI: 10.6084/m9.figshare.7028345.v1
title: L2-L4 thin-film terracing numerical simulations

description: Gradient flow numerical experiments to investigate time evolution of L2-L4 thin-film terracing scenarios.
DOI: 10.6084/m9.figshare.7028327
title: L1-L3 thin-film terracing numerical simulations

description: Gradient flow numerical experiments to investigate time evolution of L1-L3 thin-film terracing scenarios; the open and closed configurations.
DOI: 10.6084/m9.figshare.7028327.v1
title: L1-L3 thin-film terracing numerical simulations

description: Gradient flow numerical experiments to investigate time evolution of L1-L3 thin-film terracing scenarios; the open and closed configurations.
DOI: 10.6084/m9.figshare.7028330
title: Seabird breeding populantions decrease along the arid coastline of South Africa’s Northern Cape province<sup>§</sup>

description: Numbers of eight seabird species that have bred in coastal areas of South Africa’s arid Northern Cape province have all shown substantial decreases since initial estimates of their abundance were made in the latter part of the twentieth century. Likely drivers of these decreases include reduced availability of food and the loss of suitable breeding habitat, including in the Orange River Estuary and at coastal pans and islands, which has resulted from a variety of human alterations, uses and disturbances. The decreases have contributed to a worsening conservation status of several of the seabirds, some of which are endemic to southern Africa. The more adaptable species appear to have partially offset habitat loss by moving to alternative breeding sites. However, substitute habitat is limited and the more numerous species suffered relatively large decreases. In order to conserve remnant populations it will be necessary to prevent further loss of breeding habitat, restore some former habitats and provide suitable, alternative habitat.
DOI: 10.6084/m9.figshare.7028300
title: 3-Phase regularisation parameter investigation

description: Numerical investigation of the effect of the regularisation parameter $\mu$ in a 3-phase Ohta-Kawasaki model for diblock copolymer/homopolymer blends, for three different mesh sizes.
DOI: 10.6084/m9.figshare.7028297
title: Large $\chi^{\Delta}$, larger $L$ 1D gradient-flow/sharp-interface comparison (Scenario 3 subset)

description: Large $\chi^{\Delta}$, larger $L$ 1D gradient-flow/sharp-interface comparison
DOI: 10.6084/m9.figshare.7028291
title: Large $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison (Scenario 2 subset)

description: Large $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison
DOI: 10.6084/m9.figshare.7028297.v1
title: Large $\chi^{\Delta}$, larger $L$ 1D gradient-flow/sharp-interface comparison (Scenario 3 subset)

description: Large $\chi^{\Delta}$, larger $L$ 1D gradient-flow/sharp-interface comparison
DOI: 10.25585/1487556
title: Thermophilic and halophilic bacteria from microbial communities enriched on switchgrass with ionic liquid from bioreactor at University of California, Davis
DOI: 10.25585/1487557
title: Deconstructing the Microbial Decomposition Strategies in a Wet, Tropical Soil
DOI: 10.25585/1487558
title: Evaluating Regulation of Simultaneous Sugar Metabolism in S. acidocaldarius
DOI: 10.25585/1487559
title: Genome resequencing to investigate movement of transposons in Caldicellulosiruptor and Clostridia species after genetic manipulation
DOI: 10.25585/1487560
title: Comparative metagneomics of mesophilic and thermophilic cellulose-adapted consortia
DOI: 10.25585/1487561
title: Metagenome sequence for biofuel synthesis (IV)
DOI: 10.25585/1487562
title: Mapping of xylan supressor mutants
DOI: 10.25585/1487563
title: Metagenomic and genomic analysis of terrestrial hot springs at Yellowstone National Park for novel enzymes and pathways from extremely thermophilic bacteria
DOI: 10.25585/1487564
title: The role of the GlyR3 transcriptional regulator in biomass hydrolysis and metabolism in Clostridium thermocellum
DOI: 10.25585/1487565
title: Resequencing of Trichoderma reesei cellulase production mutants
DOI: 10.25585/1487566
title: RNAseq profiling of engineered S. cerevisiae during conversion of cellulosic sugars into biofuels
DOI: 10.25585/1487567
title: Rice EFR-XA21 RNAseq
DOI: 10.25585/1487568
title: Rapid genome re-sequencing of E. coli free fatty acid producers
DOI: 10.25585/1487569
title: Switchgrass diversity analysis via exome capture sequencing
DOI: 10.25585/1487570
title: Rhodopseudomonas palustris evolution for photoheterotrophic metabolism of syringic acid
DOI: 10.25585/1487571
title: Connecting fungal phenotypes to genotypes in Neurospora crassa
DOI: 10.25585/1487572
title: Comparative transcriptomics of Aspergillus niger during biomass deconstruction of wheat straw
DOI: 10.25585/1487573
title: Whole genome sequencing of Brachypodium distachyon late flowering natural accessions and flowering time mutants
DOI: 10.25585/1487574
title: Highly Ionic Liquid Tolerant Bacillus Strains
DOI: 10.25585/1487575
title: Tracking down cineol synthesis in endophytic fungi.
DOI: 10.25585/1487576
title: Understanding the mechanisms of enzyme hyperporduction in Aspergillus
DOI: 10.25585/1487577
title: Biofuel Metagenome 5 - Metagenome sequence for biofuel synthesis
DOI: 10.25585/1487578
title: Biofuel Metagenome 6 - Metagenome sequence for biofuel synthesis
DOI: 10.25585/1487580
title: Full length cDNA sequencing using PacBio technology to improve switchgrass EST unigene assembly
DOI: 10.25585/1487582
title: Evolution of Microbial Consortia Adapted to Biomass Substrates
DOI: 10.25585/1487583
title: Oryza sativa DEX-Inducible XA21 transcriptomics
DOI: 10.25585/1487585
title: RNA-seq transcriptomics analysis of BESC switchgrass plants
DOI: 10.25585/1487586
title: High solids ionic liquid tolerant metagenome and metatransciptome
DOI: 10.25585/1487587
title: Characterization of deconstructive microbial communities enriched on lignocellulosic waste streams from bioreactor at University of California, Davis
DOI: 10.25585/1487588
title: Transcriptional analysis of flowering time in switchgrass
DOI: 10.25585/1487589
title: Genome sequence of novel Thermoanaerbacterium sp. strain RBIITD
DOI: 10.25585/1487590
title: Resequencing of isolates of evolved Clostridium thermocellum ethanol tolerant mutants
DOI: 10.25585/1487591
title: Resequencing of Aspergillus niger strains transformed with thermophilic bacterial cellulases
DOI: 10.25585/1487592
title: Transcriptome analysis of Aspergillus niger stains grown at different temperatures
DOI: 10.25585/1487593
title: Resequencing of Aspergillus niger heterologous enzyme hyperproduction mutants
DOI: 10.25585/1487595
title: Sequencing of Potential Lignin Degrading Lysinibacillus isolates
DOI: 10.25585/1487596
title: Transcriptome profiling of vernalization mediated expression changes in Brachypodium
DOI: 10.25585/1487597
title: RNA-seq analysis of virus-induced gene silenced (VIGS) lines in foxtail millet
DOI: 10.25585/1487598
title: Metatranscriptome of Switchgrass Rhizosphere
DOI: 10.25585/1487599
title: Analyses of transcriptional responses of an Arabidopsis pectin mutant to decipher cell wall-dependent signaling mechanisms
DOI: 10.25585/1487600
title: Comparative genomics of bacterial root endophytes of switchgrass collected from native prairies over two seasons
DOI: 10.25585/1487601
title: Identification of genes involved in cell wall acetylation
DOI: 10.25585/1487602
title: Strand-specific RNAseq to identify transcription units and quantify gene expression during the fermentation of ethanologens in lignocellulosic hydrolysates produced from different biomass feedstocks and other multiomic fermentation experiments.
DOI: 10.25585/1487604
title: Whole genome sequencing of first native US strain of Sebacina sp isolated from switchgrass
DOI: 10.14457/mu.the.1999.525
title: Protein-energy and carnitine status in patients with carcinoma of the larynx receiving two different types of enteral formulas
DOI: 10.14457/mu.the.1999.526
title: Evaluation of 2 enteral formulas on lipid status in patients with carcinoma of the larynx
DOI: 10.14457/mu.the.1999.527
title: Development of an amperometric immunosensor for the determination of methamphetamine
DOI: 10.14457/mu.the.1999.528
title: Pulpal response to dental silver amalgam and amalgam bond
DOI: 10.14457/mu.the.1999.529
title: A design and development of the student registration and evaluation system using object-oriented technology and relational database
DOI: 10.14457/mu.the.1999.530
title: Image analysis of red blood cell morphology and nucleated red blood cell in relation to parameters of hematology analyzer
DOI: 10.14457/mu.the.1999.531
title: Evaluation of nonsteroidal anti-inflammatory drugs as ligand of peroxisome proliferator activated receptor
DOI: 10.14457/mu.the.1999.532
title: Proline scanning mutagenesis of selected helices of the Bacillus thuringiensis Cry 48 toxin
DOI: 10.14457/mu.the.1999.533
title: Expression and purification of the protease complex NS2B-NS3 from the dengue virus type 2
DOI: 10.14457/mu.the.1999.534
title: A prototype of voice personality transformation
DOI: 10.14457/mu.the.1999.535
title: Formulation of dietary fiber-enriched bakery products containing guava pomace and guava seeds
DOI: 10.14457/mu.the.1999.536
title: Optimization of heterologous expression of giant catfish pangasianodon gigas growth hormone in Saccharomyces cerevisiae
DOI: 10.14457/mu.the.1999.537
title: Plasmodium falciparum : mitochondrial oxygen uptake in asexual and sexual blood stages
DOI: 10.14457/mu.the.1999.538
title: A study of phase structure formation and mechanical properties of ternary composites of polypropylene, elastomer and filler
DOI: 10.14457/mu.the.1999.539
title: Effect of a simple nutrition education model on weight control in obese school children
DOI: 10.14457/mu.the.1999.540
title: Antimicrobial activities of volatile oil and curcuminoids from curcuma longa
DOI: 10.14457/mu.the.1999.541
title: Comparison of radon concentrations in dwellings and concrete product factories in Ubonratchathani
DOI: 10.14457/mu.the.1999.542
title: Modification of swelling clays for use as reinforcing additives in poly (vinyl chloride)
DOI: 10.14457/mu.the.1999.543
title: Risk factors of mortality associated with motor vehicle accidents in Saraburi province
DOI: 10.14457/mu.the.1999.544
title: Bioactive compounds from root of phyllanthus acidus skeels
DOI: 10.25585/1487579
title: Biofuel Metagenome 7 - Metagenome sequence for biofuel synthesis
DOI: 10.25585/1487581
title: Genomic analysis of Rhodobacter sphaeroides strains with altered electron flow
DOI: 10.25585/1487584
title: Eucalyptus resequencing: establishing genotype to phenotype
DOI: 10.25585/1487594
title: Understanding pathway leading to the biosynthesis of novel lignins
DOI: 10.25585/1487603
title: Populus deltoides de novo assembly project
DOI: 10.25585/1487605
title: Interaction transcriptome analysis between switchgrass and its beneficial microbial partner, Sebacina vermifera
DOI: 10.25585/1487606
title: Epigenetics in Aspergillus niger
DOI: 10.25585/1487607
title: PacBio sequencing to determine DNA methylase specificity
DOI: 10.25585/1487608
title: Maize RNAseq and small RNA expression profiling of core biomass genotypes
DOI: 10.25585/1487609
title: Bacterium that degrades ferulic acid
DOI: 10.25585/1487610
title: Genome sequencing of three representative oleaginous yeasts to better understand growth and lipid synthesis coupling
DOI: 10.25585/1487611
title: Populus deltoides EPSP transgenic fast track
DOI: 10.25585/1487612
title: Bacterium that degrades ferulic acid II
DOI: 10.25585/1487613
title: Time Series Metagenomic Analysis of the Development of Thermophilic Bacterial Consortium Growing on Cellulose
DOI: 10.25585/1487614
title: Whole Genome sequencing of Brachypodium mutants
DOI: 10.25585/1487615
title: Comparison of transcriptomes of Clostridium thermocellum cultures for higher ethanol production
DOI: 10.25585/1487616
title: Re-sequencing of highly productive methyl ketone-producing E. coli mutants
DOI: 10.25585/1487617
title: Aromatic degrading bacteria and fungi
DOI: 10.25585/1487618
title: Sequencing of uracil auxotroph parent strains used in the genetic manipulation of Caldicellulosiruptor bescii
DOI: 10.25585/1487619
title: Expression Quantitative Trait Nucleotides Mapping in Populus trichocarpa
DOI: 10.25585/1487620
title: EFR RNAseq
DOI: 10.25585/1487621
title: Single-cell RNA-seq in budding yeast responding to stress
DOI: 10.25585/1487622
title: Arabidopsis thaliana angustifolia mutant fast track
DOI: 10.25585/1487623
title: Genome and Transcriptome Sequencing of an Alkaline-tolerant Cellulolytic Fungus
DOI: 10.25585/1487624
title: Genomic analysis of Escherichia coli strains with improved co-utilization of lignocellulos-derived sugars
DOI: 10.25585/1487625
title: Switchgrass resequencing of diversity for the Community sequencing effort
DOI: 10.25585/1487626
title: Evaluation of Caldicellulosiruptor bescii uracil auxotroph strains MACB1017-1021 for use in genetic manipulations
DOI: 10.25585/1487627
title: Sequencing of Streptomyces to enable strain engineering
DOI: 10.25585/1487628
title: Resequencing of PCA-degrading E. coli
DOI: 10.25585/1487629
title: BESC_Line_270_Switchgrass_UAM1_KD
DOI: 10.25585/1487630
title: Characterization of Microbial Solubilization of Switchgrass at High Solids by Enrichment Cultures
DOI: 10.25585/1487631
title: Sugarcane BAC sequencing
DOI: 10.25585/1487632
title: Characterizing lignin-adapted microbial communities
DOI: 10.25585/1487633
title: Genome-sequencing pathogenic bacteria to identify effectors stimulating plant growth
DOI: 10.25585/1487634
title: Drought tolerance gene
DOI: 10.25585/1487635
title: Metagenome sequence of soil samples from the Meta-N Project
DOI: 10.25585/1487636
title: Understanding the impact of integration copy number and genome location on heterologous gene expression in Rhodosporidium toruloides
DOI: 10.25585/1487637
title: Switchgrass TF regulatory network
DOI: 10.25585/1487638
title: Novosphingobium aromaticivorans Lignin BarSeq
DOI: 10.25585/1487639
title: RNA-Seq for Clostridium thermocellum chemostat experiment
DOI: 10.25585/1487640
title: Transcriptomics analysis to reveal tolerance mechanisms of Pseudomonas putida towards the toxicity of complex biomass derived substrates
DOI: 10.25585/1487641
title: Biological deconstruction of lignocellulose under thermophilic and microaerophilic conditions
DOI: 10.25585/1487642
title: Resequencing E. coli with improved tolerance or catabolism
DOI: 10.25585/1487643
title: Resequencing the genome for Clostridium thermocellum CTN20
DOI: 10.25585/1487644
title: Characterize Cellular Metabolisms of Biofuels-Producing Microbes During No-Growth, Chemical Production Phases
DOI: 10.25585/1487645
title: Resequencing Corynebacterium glutamicum spontaneous mutants
DOI: 10.25585/1487646
title: Genome sequencing and expression profiling of engineered isobutanol-producing Clostridium thermocellum strains
DOI: 10.25585/1487647
title: Understand the epigenomics status of Arabidospsis mutants impaired in C1 pathway gene S-adenosyl-l-methionine synthetase (SAMS) and its impact on biomass production
DOI: 10.25585/1487648
title: Analyses of transcriptional responses of an Arabidopsis EMS mutant to decipher cell wall-dependent signaling mechanisms
DOI: 10.25585/1487649
title: Re-sequencing of engineered methyl ketone-producing E. coli strains
DOI: 10.25585/1487650
title: De novo sequencing of Pseudomonas fluorescens ATCC 49036
DOI: 10.25585/1487651
title: Gene synthesis and expression of novel carbohydrate-active enzymes from a thermal marsh for expression in Escherichia coli
DOI: 10.25585/1487652
title: Synthetic operons for upgrade to cellulolytic capacity
DOI: 10.25585/1487653
title: Resequencing of Actinobacillus succinogenes after evolution for fast growth on hemicellulosic sugars and crude glycerol
DOI: 10.25585/1487654
title: Genome Sequencing of Cochliobolus sativus, an important fungal pathogen of cereal crops
DOI: 10.25585/1487655
title: Connection between methane and nitrogen cycles in freshwater lakes, as revealed by functional metagenomics
DOI: 10.25585/1487656
title: Comparative genome sequencing of four Labyrinthulomycete species to provide new insights into their biosynthetic pathways and role in global carbon cycling
DOI: 10.25585/1487657
title: Sequencing of the pan-global basidiomycetes Pisolithus tinctorius and Pisolithus microcarpus for increased knowledge of the ectomycorrhizal symbiosis
DOI: 10.25585/1487658
title: Completion of the Dekkera (Brettanomyces) bruxellensis genome sequence
DOI: 10.25585/1487660
title: Using stable isotope probing to uncover carbon flow and transcriptomics of a microbial community carrying out naphthalene biodegradation
DOI: 10.25585/1487662
title: Resequencing Zymomonas mobilis industrial strain ZM4. Sequencing Zymomonas mobilis transcriptomes.
DOI: 10.25585/1487663
title: A deep transcriptomic and genomic investigation of diatom life cycle regulation
DOI: 10.25585/1487667
title: Single cell genome sequencing of the mesopelagic bacterioplankton
DOI: 10.25585/1487668
title: Determination of the natural microbial communty associated with the cyanobacteria Trichodesmium
DOI: 10.14457/mu.res.1999.4
title: Pathophysiology of diseases prevalent in Thailand
DOI: 10.14457/mu.the.1999.545
title: Molecular cloning and sequencing of phosphotransacetylase gene from Salmonella typhimurium