cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.uxnhgz
title: Occurrence Download

description: A dataset containing 4587 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acacia farnesiana (L.) Willd."
 ]
}

 The dataset includes 4587 records from 289 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011744-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mhzw7
title: Occurrence Download

description: A dataset containing 737 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juncus ensifolius Wikstr.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 737 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010908-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31041036
title: Sarcoid Uveitis Epidemiology, Systemic Treatment, and Complications: A Large United States National Database Study

description: To determine the epidemiology of sarcoidosis and sarcoid uveitis and the investigations, systemic treatments, and complications of sarcoid uveitis on a population level. We performed a retrospective cohort study using the TriNetX United States Collaborative Network to identify cases using the International Classification of Diseases, 10th Revision (ICD-10) codes. We calculated the incidence and prevalence of sarcoidosis in our cohort and uveitis in sarcoidosis patients per 100,000 persons from 2013 to 2025. We assessed the management pathways and the ocular complication rates in sarcoid uveitis patients. Among 108,597,869 patients, 146,356 had sarcoidosis, and 5,609 had sarcoid uveitis, with mean ages of 62.6 years and 58.8 years, respectively, and female predominance in both cohorts (56.5–60.4%). Most sarcoidosis patients were White (53.4%), while the majority of sarcoid uveitis patients were Black or African American (43.68%). Almost 4% of patients with sarcoidosis developed uveitis within 5 years, and the incidence of uveitis in sarcoidosis patients remained relatively constant, while the prevalence of both sarcoidosis in our cohort and uveitis in sarcoidosis patients increased in our study period. In sarcoid uveitis patients, the most common investigative and treatment modalities were chest X-ray (41%) and glucocorticoids (44%), respectively, and the most common ocular complications within 5 years of sarcoid uveitis diagnosis were cataract (35.7%), glaucoma (30.6%), cystoid macular edema (16.1%), and low vision and blindness (10.2%). Sarcoidosis prevalence rose over 12 years, but uveitis rates remained stable. One-third of sarcoid uveitis patients developed major ocular complications, highlighting the disease burden.
DOI: 10.6084/m9.figshare.31041036.v1
title: Sarcoid Uveitis Epidemiology, Systemic Treatment, and Complications: A Large United States National Database Study

description: To determine the epidemiology of sarcoidosis and sarcoid uveitis and the investigations, systemic treatments, and complications of sarcoid uveitis on a population level. We performed a retrospective cohort study using the TriNetX United States Collaborative Network to identify cases using the International Classification of Diseases, 10th Revision (ICD-10) codes. We calculated the incidence and prevalence of sarcoidosis in our cohort and uveitis in sarcoidosis patients per 100,000 persons from 2013 to 2025. We assessed the management pathways and the ocular complication rates in sarcoid uveitis patients. Among 108,597,869 patients, 146,356 had sarcoidosis, and 5,609 had sarcoid uveitis, with mean ages of 62.6 years and 58.8 years, respectively, and female predominance in both cohorts (56.5–60.4%). Most sarcoidosis patients were White (53.4%), while the majority of sarcoid uveitis patients were Black or African American (43.68%). Almost 4% of patients with sarcoidosis developed uveitis within 5 years, and the incidence of uveitis in sarcoidosis patients remained relatively constant, while the prevalence of both sarcoidosis in our cohort and uveitis in sarcoidosis patients increased in our study period. In sarcoid uveitis patients, the most common investigative and treatment modalities were chest X-ray (41%) and glucocorticoids (44%), respectively, and the most common ocular complications within 5 years of sarcoid uveitis diagnosis were cataract (35.7%), glaucoma (30.6%), cystoid macular edema (16.1%), and low vision and blindness (10.2%). Sarcoidosis prevalence rose over 12 years, but uveitis rates remained stable. One-third of sarcoid uveitis patients developed major ocular complications, highlighting the disease burden.
DOI: 10.15156/bio/sh0194957.10fu
title: SH0194957.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194958.10fu
title: SH0194958.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194959.10fu
title: SH0194959.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194960.10fu
title: SH0194960.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.26646963
title: Additional file 10 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 10. Data supporting Table 1.
DOI: 10.6084/m9.figshare.26646963.v1
title: Additional file 10 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 10. Data supporting Table 1.
DOI: 10.6084/m9.figshare.26646969
title: Additional file 12 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 12: Table S6. Gene ontology analysis for gene expression epimutations. Gene ontology analysis results for gene expression changes across the mutation accumulation lines
DOI: 10.6084/m9.figshare.26646969.v1
title: Additional file 12 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 12: Table S6. Gene ontology analysis for gene expression epimutations. Gene ontology analysis results for gene expression changes across the mutation accumulation lines
DOI: 10.6084/m9.figshare.26646975
title: Additional file 14 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 14. Data supporting Fig. 3.
DOI: 10.6084/m9.figshare.26646975.v1
title: Additional file 14 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 14. Data supporting Fig. 3.
DOI: 10.6084/m9.figshare.26646984
title: Additional file 17 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 17: Table S7. Stepwise analysis of association of gene expression changes and 22G-RNAs epimutations in the different exposure conditions. To test the association between 22G-RNAs epimutations and gene expression epimutations, we first looked at all genes as a background regardless of whether they had expression change or not. Then, the proportion of genes with gene expression epimutation was compared to the proportion of genes which had 22G-RNAs epimutation. The overlap, in which genes had both expression changes and 22G-RNA epimutations, was calculated (Test 1). In a second time, only genes with gene expression epimutation were selected and among these genes, the proportion of genes with inherited expression changes was compared with the proportion of genes with 22G-RNA epimutations and the overlap was calculated (Test 2). In third, among genes with genes expression changes, the proportion of ones with inherited expression change was compared with the proportion of genes with simultaneous 22G-RNA epimutation. The overlap of genes with both conditions was calculated (Test 3) Finally, this third analysis was repeated but among genes with BOTH gene expression change and 22G-RNA epimutation (Test 4). Odds ratios and p-values for each test and in each condition were calculated with Fisher’s Exact Test. Cells in yellow indicate significantly increased odds of association, cells in grey indicate no significant association.
DOI: 10.6084/m9.figshare.26646984.v1
title: Additional file 17 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 17: Table S7. Stepwise analysis of association of gene expression changes and 22G-RNAs epimutations in the different exposure conditions. To test the association between 22G-RNAs epimutations and gene expression epimutations, we first looked at all genes as a background regardless of whether they had expression change or not. Then, the proportion of genes with gene expression epimutation was compared to the proportion of genes which had 22G-RNAs epimutation. The overlap, in which genes had both expression changes and 22G-RNA epimutations, was calculated (Test 1). In a second time, only genes with gene expression epimutation were selected and among these genes, the proportion of genes with inherited expression changes was compared with the proportion of genes with 22G-RNA epimutations and the overlap was calculated (Test 2). In third, among genes with genes expression changes, the proportion of ones with inherited expression change was compared with the proportion of genes with simultaneous 22G-RNA epimutation. The overlap of genes with both conditions was calculated (Test 3) Finally, this third analysis was repeated but among genes with BOTH gene expression change and 22G-RNA epimutation (Test 4). Odds ratios and p-values for each test and in each condition were calculated with Fisher’s Exact Test. Cells in yellow indicate significantly increased odds of association, cells in grey indicate no significant association.
DOI: 10.6084/m9.figshare.26646987
title: Additional file 18 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 18. Data supporting Fig. 4.
DOI: 10.6084/m9.figshare.26646987.v1
title: Additional file 18 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 18. Data supporting Fig. 4.
DOI: 10.6084/m9.figshare.26646996
title: Additional file 21 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 21: Table S8. Number and maximal duration of epimutations by tRNAs type.
DOI: 10.6084/m9.figshare.26646996.v1
title: Additional file 21 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 21: Table S8. Number and maximal duration of epimutations by tRNAs type.
DOI: 10.6084/m9.figshare.26647002
title: Additional file 23 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 23. Data supporting Fig. 5.
DOI: 10.6084/m9.figshare.26647002.v1
title: Additional file 23 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 23. Data supporting Fig. 5.
DOI: 10.1594/pangaea.220424
title: Mineral composition of bulk sediment from Hole 17-164
DOI: 10.6084/m9.figshare.26647005
title: Additional file 24 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 24: Table S9. Table of tRNAs 3’ halves epimutations associated with apoptotic genes. Only the gene vps-16 was identified as a potential tRNAs target. No associated tRNA 3’ halve epimutation was observed and thus for all lineages and in all conditions.
DOI: 10.6084/m9.figshare.26647005.v1
title: Additional file 24 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 24: Table S9. Table of tRNAs 3’ halves epimutations associated with apoptotic genes. Only the gene vps-16 was identified as a potential tRNAs target. No associated tRNA 3’ halve epimutation was observed and thus for all lineages and in all conditions.
DOI: 10.6084/m9.figshare.26647008
title: Additional file 25 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 25. Data supporting Fig. 6.
DOI: 10.6084/m9.figshare.26647008.v1
title: Additional file 25 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 25. Data supporting Fig. 6.
DOI: 10.6084/m9.figshare.26647011
title: Additional file 26 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 26. Data supporting Fig. 7.
DOI: 10.6084/m9.figshare.26647011.v1
title: Additional file 26 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 26. Data supporting Fig. 7.
DOI: 10.1594/pangaea.220426
title: Mineral composition of bulk sediment from Hole 17-165A
DOI: 10.1594/pangaea.802531
title: (Table 1) Mineralogy of bulk samples at DSDP Holes 86-576, 86-578, and 86-581

description: Sediment depth is given in mbsf. x indicates mineral is present.
DOI: 10.6084/m9.figshare.26647014
title: Additional file 27 of Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans

description: Additional file 27. Data supporting Fig. S2.
DOI: 10.15468/dl.42jcxb
title: Occurrence Download

description: A dataset containing 41117 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation, Occurrence evidence, Observation)",
 "GadmGid is CZE",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 1000-1958"
 ]
}

 The dataset includes 41117 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035242-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xaqq54
title: Occurrence Download

description: A dataset containing 2778 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lemna turionifera Landolt"
 ]
}

 The dataset includes 2778 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003454-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2rjkry
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anoura carishina Mantilla-Meluk & Baker, 2010"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035243-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hksr7r
title: Occurrence Download

description: A dataset containing 1232 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Phyllodactylus xanti Cope, 1863"
 ]
}

 The dataset includes 1232 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004695-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfqzp2
title: Occurrence Download

description: A dataset containing 278 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendriscocaulon umhausense (Auersw.) Degel."
 ]
}

 The dataset includes 278 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012674-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a1gq5g
title: Occurrence Download

description: A dataset containing 473 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monomorium minimum (Buckley, 1867)"
 ]
}

 The dataset includes 473 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003455-150410134957023/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f7qxmp
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mnium heterophyllum (Hook.) Schwägr.",
 "Year 1970-2023"
 ]
}

 The dataset includes 38 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045984-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kqthmh
title: Occurrence Download

description: A dataset containing 2238409 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2238409 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003455-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z47arb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trichogramma dendrolimi (Matsumura, 1926), Trichogramma dendrolimi, Trichogramma dendrolimi, Trichogramma dendrolimi, Trichogramma dendrolimi Matsumura, 1926, Trichogramma dendrolimi Matsumura, 1926, Trichogramma dendrolimi Matsumura, 1926, Trichogramma dendrolimi Matsumura, 1926, Wolbachia endosymbiont of Trichogramma dendrolimi, Trichogramma dendrolimi Matsumura, 1926, Trichogramma dendrolimi Matsumura, 1926, Trichogramma dendrolimi Matsumura, 1926, Trichogramma dendrolimi (Matsumura, 1926), Trichogramma dendrolimi Matsumura, 1926, 161515115, 157852007, Trichogramma dendrolimi Matsumura, 1926, Trichogramma dendrolimi Matsumura, 1926, Wolbachia endosymbiont of Trichogramma dendrolimi, Ostrinia furnacalis (Guenée, 1854), Trichogramma pallida Meyer, 1940, Trichogramma dendrolimusi Matsumura, Trichogramma pallida Meyer, 1940, Trichogramma liliyingae Voegele & Pintureau, 1984, Trichogramma pallidum Meyer, 1940, Trichogramma dendrolini Matsumura, 1926, Trichogramma liliyingae Voegelé & Pintureau, 1984, Trichogramma dendrolimusi Matsumura, Trichogramma pallida Meyer, 1940, 161515118, 161515117, Trichogramma dendrolini Matsumura, 1926)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045967-231002084531237/datasets/export for details.