cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22179841
title: DataVassilissaDolivo.xlsx

description: Data used for reciprocity and learning experiments
DOI: 10.6084/m9.figshare.22179841.v1
title: DataVassilissaDolivo.xlsx

description: Data used for reciprocity and learning experiments
DOI: 10.5281/zenodo.7678854
title: cacatua_tenuirostris_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7678853
title: cacatua_tenuirostris_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7458802
title: Database of northeastern African archaeological and heritage sites

description: This dataset contains archaeological and heritage sites of the Marmarica region (NE-Libya/NW-Egypt) ranging from the Late Bronze to the Roman times. It has been developed in the framework of the PERAIA project, which aims to analyse the long-term history and interaction patterns along the harsh environments of north-eastern Africa. The records contain accurate geographic location of sites, including place names, typology, chronology, and metadata of documented remains, along with information regarding the environmental and ecological context. Additionally, the dataset accounts for the specificities of the region’s varying environmental conditions and their potential impact on archaeological heritage. All this information associated with each archaeological site was collected from published field data surveys, maps, archaeological reports, and it was subsequently cross-checked with historical aerial photographs and satellite imagery to detect, and to register known and unknown sites within the study area.
DOI: 10.5281/zenodo.7488554
title: Database of northeastern African archaeological and heritage sites

description: This dataset contains archaeological and heritage sites of the Marmarica region (NE-Libya/NW-Egypt) ranging from the Late Bronze to the Roman times. It has been developed in the framework of the PERAIA project, which aims to analyse the long-term history and interaction patterns along the harsh environments of north-eastern Africa. The records contain accurate geographic location of sites, including place names, typology, chronology, and metadata of documented remains, along with information regarding the environmental and ecological context. Additionally, the dataset accounts for the specificities of the region’s varying environmental conditions and their potential impact on archaeological heritage. All this information associated with each archaeological site was collected from published field data surveys, maps, archaeological reports, and it was subsequently cross-checked with historical aerial photographs and satellite imagery to detect, and to register known and unknown sites within the study area.
DOI: 10.5281/zenodo.7678852
title: Database of northeastern African archaeological and heritage sites

description: This dataset contains archaeological and heritage sites of the Marmarica region (NE-Libya/NW-Egypt) ranging from the Late Bronze to the Roman times. It has been developed in the framework of the PERAIA project, which aims to analyse the long-term history and interaction patterns along the harsh environments of north-eastern Africa. The records contain accurate geographic location of sites, including place names, typology, chronology, and metadata of documented remains, along with information regarding the environmental and ecological context. Additionally, the dataset accounts for the specificities of the region’s varying environmental conditions and their potential impact on archaeological heritage. All this information associated with each archaeological site was collected from published field data surveys, maps, archaeological reports, and it was subsequently cross-checked with historical aerial photographs and satellite imagery to detect, and to register known and unknown sites within the study area.
DOI: 10.5281/zenodo.7678858
title: The ARRIVE Essential 10: author checklist- The effect of 10% ointment concentration of ethyl acetate subfraction of meniran (Phyllanthusniruri L.) leaves on excision wound healing in white male rats

description: The ARRIVE Essential 10: author checklist- The effect of 10% ointment concentration of ethyl acetate subfraction of meniran (Phyllanthusniruri L.) leaves on excision wound healing in white male rats
DOI: 10.5281/zenodo.7678857
title: The ARRIVE Essential 10: author checklist- The effect of 10% ointment concentration of ethyl acetate subfraction of meniran (Phyllanthusniruri L.) leaves on excision wound healing in white male rats

description: The ARRIVE Essential 10: author checklist- The effect of 10% ointment concentration of ethyl acetate subfraction of meniran (Phyllanthusniruri L.) leaves on excision wound healing in white male rats
DOI: 10.21227/1r2d-j408
title: Physical Realizations of Multidimensional Voronoi Constellations in Optical Communication Systems

description: Multidimensional geometric shaping has been shown to outperform uniform quadrature amplitude modulation (QAM) in optical communication systems but the complexity of symbol decision and bit mapping can often be significant as dimensionality increases. In this paper, a low-complexity geometric shaping method based on multidimensional lattices is investigated both in experiments and simulations. The modulation formats designed based on this method are called Voronoi constellations (VCs) and we study them in 8, 16, and 32 dimensions. We obtain transmission reach improvements of up to 22 and 70% for VCs compared to 4QAM and 16QAM, respectively, in nonlinear long-haul fiber transmission. Moreover, we compare different physical realizations of multidimensional VCs over wavelengths, polarizations, and time slots in both the Gaussian and nonlinear fiber channels. We demonstrate that different physical realizations perform similarly in the fiber-optic back-to-back channel. However, in long-haul transmission systems, spreading the dimensions over time slots can increase the transmission reach up to 4% compared to wavelengths and polarizations. Furthermore, the mutual information and generalized mutual information are estimated and compared to QAM formats at the same spectral efficiencies
DOI: 10.5281/zenodo.7675499
title: Embracing fine-root system complexity in terrestrial ecosystem modelling

description: Model outputs for manuscript " <strong>Embracing fine-root system complexity in terrestrial ecosystem modelling</strong>".
DOI: 10.5281/zenodo.7675500
title: Embracing fine-root system complexity in terrestrial ecosystem modelling

description: Model outputs for manuscript " <strong>Embracing fine-root system complexity in terrestrial ecosystem modelling</strong>".
DOI: 10.5281/zenodo.7678851
title: Embracing fine-root system complexity in terrestrial ecosystem modelling

description: Model outputs for manuscript " <strong>Embracing fine-root system complexity in terrestrial ecosystem modelling</strong>".
DOI: 10.5281/zenodo.7678861
title: negaprion_brevirostris_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7678860
title: negaprion_brevirostris_zanfona_1.fasta.gz

description: .
DOI: 10.5683/sp2/lq7coh
title: Hartwell Locks (House 1, Lock Master´s House and Storage House) (2020)

description: This is a dataset of information compiled for the CIVE3207 (ARCN4100) Historic Site Recording and Assessment course in 2020. Undergraduate students of the Architectural Conservation and Sustainability Program (Engineers and architects) at Carleton University will use these data to produce Heritage Recording of this important Site. This dataset contains information of three historic buildings, including the House 1, Lock Master's House and Storage House. A map identifying the sites has been included. For the 3D scanning point clouds two datasets have been provided: one including the Lock Master's and Storage Houses and one with the House 1, files are provided in E57 and Recap formats.
DOI: 10.6084/m9.figshare.14071439.v6
title: Replication Data for: Human-Network Regions as Effective Geographic Units for Disease Mitigation

description: CountyResultCommunities_ByMethod.csv: This dataset contains community detection results for each U.S. county in the Conterminous U.S., where the community detection methods divide counties into separate groups (i.e., clusters). There are five different input networks (Commuters, Facebook relationships, Migrants, GPS-based trips and Twitter co-mentions). The different methods were selected using the igraph package in R. A Q statistic is reported for each network/method combination.<br> <br> Migrants_Commuters.csv: Undirected edgelist of counties in the U.S. weighted by migrants and commuters.
DOI: 10.3886/e126941v1-133040
title: Data and Code for: Will Studying Economics Make You Rich? A Regression Discontinuity Analysis of the Returns to College Major

description: This record contains the code and publicly-available data used to produce the results presented in "Will Studying Economics Make You Rich? A Regression Discontinuity Analysis of the Returns to College Major":<br><br>We investigate the wage return to studying economics by leveraging a policy that prevented students with low introductory grades from declaring the major. Students who barely met the GPA threshold to major in economics earned $22,000 (46%) higher annual early-career wages than they would have with their second-choice majors. Access to the economics major shifts students' preferences toward business/finance careers, and about half of the wage return is explained by economics majors working in higher-paying industries. The causal return to majoring in economics is very similar to observational earnings differences in nationally representative data.<br>
description: 1999-2014 enrollees of the University of California, Santa Cruz.
description: Confidential data sources are omitted.
DOI: 10.34740/kaggle/ds/2943330
title: Head gesture recognition with Capacitive Sensors
DOI: 10.6084/m9.figshare.22179071.v4
title: Supplementary material of the project "Understanding the role of ectopic recombination of subtelomeres in the generation of antigenic gene diversity in Plasmodium parasites"

description: <strong>Supplementary material datasets: </strong> <strong>Dataset 1:</strong> Database for phylogenetic reconstruction of the genus <em>Plasmodium.</em> <strong>Dataset 2:</strong> Trees of the genus <em>Plasmodium</em> generated with six phylogenetic tools (Majority-rule consensus tree of the 6 trees obtained). <strong>Dataset 3:</strong> Database for chromosome mapping of gene conservation. <strong>Dataset 4:</strong> List of predominant gene families in young regions per species. <strong>Dataset 5: </strong>Classification of gene families (with the highest number of sequences in young regions) based on the nature of its products. <strong>Supplementary material 1:</strong> <strong>Table S1: </strong> Criteria to define the four levels in which <em>Plasmodium</em> species are classified based on evidence of the intensity of production of antigenic diversity through ectopic recombination. <strong>Table S2:</strong> Number of species present in each major clade and in their respective minor clades. <strong>Figure S1:</strong> Proportion of species-specific or young genes excluded from chromosome mapping analysis. <strong>Supplementary material 2: </strong> Chromosome maps showing the gene conservation profile, presence of young regions, and distribution of antigenic genes in 19 <em>Plasmodium</em> species. <em>P. adleri</em> (Page 1) <em>P. berghei </em>(Page 2) <em>P. billcollinsi</em> (Page 3) <em>P. blacklocki</em> (Page 4) <em>P. chabaudi</em> chabaudi (Page 5) <em>P. coatneyi </em>(Page 6) <em>P. cynomolgi </em>(Page 7) <em>P. falciparum</em> (Page 8) <em>P. gaboni </em>(Page 9) <em>P. knowlesi</em> (Page 10) <em>P. malariae</em> (Page 11) <em>P. ovale curtisi </em>(Page 12) <em>P. praefalciparum</em> (Page 13) <em>P. reichenowi</em> (Page 14) <em>P. relictum</em> (Page 15) <em>P. vivax-like</em> (Page 16) <em>P. vivax</em> (Page 17) <em>P. vinckei vinckei</em> (Page 18) <em>P. yoelii yoelii </em>(Page 19)
DOI: 10.5281/zenodo.7678944
title: rhina_ancylostoma_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.7678943
title: rhina_ancylostoma_zanfona_1.fasta.gz

description: .
DOI: 10.6084/m9.figshare.22179895
title: Content search “Ethics software” on MOOCs, esp. edX & Coursera

description: This work takes on two research questions: · Research question 1 (RQ1): What are common structures of curricula that integrate software-related topics and ethics? · Research question 2 (RQ2): What are common topics in the curricula? I analyzed six well-known platforms for MOOCs (edX, Coursera, FutureLearn, Khan Academy, Udacity, and Udemy). All of those platforms offer a search function. The first search term was “ethics software”. I used a deliberately wide search term in order to find a wide array of courses. It is unclear how the search functions work (e.g., usage of which properties of a course; if the two words are connected by an AND- or an OR-conjunction) and they work probably differently across the platforms: · Udemy lists 3,998 courses on this search term. The search term was therefore restricted to “ethics” and filtered by pre-defined keywords “IT security” and “Artificial Intelligence”. · Coursera lists 49 results. · Khan Academy lists 19 items, but not one of them is course. · EdX delivers 10 items. · Future Learn delivers eight results. · Udacity delivers one result. Although I collected data from six MOOC platforms, this sampling covers only two platforms, namely edX and Coursera.
DOI: 10.6084/m9.figshare.22179895.v1
title: Content search “Ethics software” on MOOCs, esp. edX & Coursera

description: This work takes on two research questions: · Research question 1 (RQ1): What are common structures of curricula that integrate software-related topics and ethics? · Research question 2 (RQ2): What are common topics in the curricula? I analyzed six well-known platforms for MOOCs (edX, Coursera, FutureLearn, Khan Academy, Udacity, and Udemy). All of those platforms offer a search function. The first search term was “ethics software”. I used a deliberately wide search term in order to find a wide array of courses. It is unclear how the search functions work (e.g., usage of which properties of a course; if the two words are connected by an AND- or an OR-conjunction) and they work probably differently across the platforms: · Udemy lists 3,998 courses on this search term. The search term was therefore restricted to “ethics” and filtered by pre-defined keywords “IT security” and “Artificial Intelligence”. · Coursera lists 49 results. · Khan Academy lists 19 items, but not one of them is course. · EdX delivers 10 items. · Future Learn delivers eight results. · Udacity delivers one result. Although I collected data from six MOOC platforms, this sampling covers only two platforms, namely edX and Coursera.
DOI: 10.6084/m9.figshare.11173082
title: A multi-institutional study of inquiry-based lab activities using the Augmented Reality Sandbox: impacts on undergraduate student learning

description: We developed and tested different pedagogical treatments using an Augmented Reality (AR) Sandbox to teach introductory geoscience students about reading topographic maps at five institutions in both pilot and full implementation studies. The AR Sandbox treatments were characterized as 1) unstructured play, 2) a semi-structured lesson, and 3) a structured lesson. The success of each was contrasted with the control condition of a traditional topographic map lab without the AR Sandbox. Students completed a subset of questions from the Topographic Maps Assessment (TMA) and a series of mental rotation questions post-implementation. No significant differences were found on TMA post-test scores between groups who used the unstructured Sandbox play treatment compared to the control condition. Semi-structured and structured lesson formats similarly failed to produce a statistically significant difference on the TMA post-test. This indicates that no single treatment worked universally better than another. However, regression analysis showed two factors significantly predicted performance on the TMA, including spatial performance and self-assessed knowledge (or confidence) of topographic maps. Of the groups that used the Sandbox, students with low and high scores on the mental rotation test performed best on the TMA following the structured treatment.
DOI: 10.6084/m9.figshare.11173082.v1
title: A multi-institutional study of inquiry-based lab activities using the Augmented Reality Sandbox: impacts on undergraduate student learning

description: We developed and tested different pedagogical treatments using an Augmented Reality (AR) Sandbox to teach introductory geoscience students about reading topographic maps at five institutions in both pilot and full implementation studies. The AR Sandbox treatments were characterized as 1) unstructured play, 2) a semi-structured lesson, and 3) a structured lesson. The success of each was contrasted with the control condition of a traditional topographic map lab without the AR Sandbox. Students completed a subset of questions from the Topographic Maps Assessment (TMA) and a series of mental rotation questions post-implementation. No significant differences were found on TMA post-test scores between groups who used the unstructured Sandbox play treatment compared to the control condition. Semi-structured and structured lesson formats similarly failed to produce a statistically significant difference on the TMA post-test. This indicates that no single treatment worked universally better than another. However, regression analysis showed two factors significantly predicted performance on the TMA, including spatial performance and self-assessed knowledge (or confidence) of topographic maps. Of the groups that used the Sandbox, students with low and high scores on the mental rotation test performed best on the TMA following the structured treatment.
DOI: 10.6084/m9.figshare.11297819
title: Teaching social responsibility and geographic literacy through a course on social vulnerability in disasters

description: Social vulnerability describes human susceptibility to harm or loss from hazards; hence, understanding the human-environment interactions that underlie vulnerability is essential for aspiring emergency managers. Notably, however, pedagogical scholarship on social vulnerability remains scarce. To address this gap, this paper considers how an upper-division undergraduate course integrates a state-mandated social science objective (social responsibility). Next, it profiles a teaching intervention (the Signature Assignment Institute) aimed at improving alignment of student assignments with this objective. Empirical comparison of student assignments reveals a statistically significant improvement in quality post-intervention. Finally, the paper discusses social vulnerability’s aptness for promoting geographic literacy and social responsibility across the curriculum. Resources to improve student learning outcomes are also identified.
DOI: 10.6084/m9.figshare.11297819.v1
title: Teaching social responsibility and geographic literacy through a course on social vulnerability in disasters

description: Social vulnerability describes human susceptibility to harm or loss from hazards; hence, understanding the human-environment interactions that underlie vulnerability is essential for aspiring emergency managers. Notably, however, pedagogical scholarship on social vulnerability remains scarce. To address this gap, this paper considers how an upper-division undergraduate course integrates a state-mandated social science objective (social responsibility). Next, it profiles a teaching intervention (the Signature Assignment Institute) aimed at improving alignment of student assignments with this objective. Empirical comparison of student assignments reveals a statistically significant improvement in quality post-intervention. Finally, the paper discusses social vulnerability’s aptness for promoting geographic literacy and social responsibility across the curriculum. Resources to improve student learning outcomes are also identified.
DOI: 10.6084/m9.figshare.14236762.v1
title: Extracellular vesicle microRNA in early versus late pregnancy with birth outcomes in the MADRES study

description: Circulating miRNA may contribute to the development of adverse birth outcomes. However, few studies have investigated extracellular vesicle (EV) miRNA, which play important roles in intercellular communication, or compared miRNA at multiple time points in pregnancy. In the current study, 800 miRNA were profiled for EVs from maternal plasma collected in early (median: 12.5 weeks) and late (median: 31.8 weeks) pregnancy from 156 participants in the MADRES Study, a health disparity pregnancy cohort. Associations between miRNA and birth weight, birth weight for gestational age (GA), and GA at birth were examined using covariate-adjusted robust linear regression. Differences by infant sex and maternal BMI were also investigated. Late pregnancy measures of 13 miRNA were associated with GA at birth (P<sub>FDR</sub>&lt;0.050). Negative associations were observed for eight miRNA (miR-4454+ miR-7975, miR-4516, let-7b-5p, miR-126-3p, miR-29b-3p, miR-15a-5p, miR-15b-5p, miR-19b-3p) and positive associations for five miRNA (miR-212-3p, miR-584-5p, miR-608, miR-210-3p, miR-188-5p). Predicted target genes were enriched (P<sub>FDR</sub>&lt;0.050) in pathways involved in organogenesis and placental development. An additional miRNA (miR-107), measured in late pregnancy, was positively associated with GA at birth in infants born to obese women (P<sub>FDR</sub> for BMI interaction = 0.011). In primary analyses, the associations between early pregnancy miRNA and birth outcomes were not statistically significant (P<sub>FDR</sub>≥0.05). However, sex-specific associations were observed for early pregnancy measures of 37 miRNA and GA at birth (P<sub>FDR</sub> for interactions&lt;0.050). None of the miRNA were associated with fetal growth measures (P<sub>FDR</sub>≥0.050). Our findings suggest that EV miRNA in both early and late pregnancy may influence gestational duration.
DOI: 10.6084/m9.figshare.14974765
title: A comparison of epithelial cell content of oral samples estimated using cytology and DNA methylation

description: Saliva and buccal samples are popular for epigenome wide association studies (EWAS) due to their ease of collection compared and their ability to sample a different cell lineage compared to blood. As these samples contain a mix of white blood cells and buccal epithelial cells that can vary within a population, this cellular heterogeneity may confound EWAS. This has been addressed by including cellular heterogeneity obtained through cytology at the time of collection or by using cellular deconvolution algorithms built on epigenetic data from specific cell types. However, to our knowledge, the two methods have not yet been compared. Here we show that the two methods are highly correlated in saliva and buccal samples (R = 0.84, P &lt; 0.0001) by comparing data generated from cytological staining and Infinium MethylationEPIC arrays and the EpiDISH deconvolution algorithm from buccal and saliva samples collected from twenty adults. In addition, by using an expanded dataset from both sample types, we confirmed our previous finding that age has strong, non-linear negative correlation with epithelial cell proportion in both sample types. However, children and adults showed a large within-population variation in cellular heterogeneity. Our results validate the use of the EpiDISH algorithm in estimating the effect of cellular heterogeneity in EWAS and showed DNA methylation generally underestimates the epithelial cell content obtained from cytology.