cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17205043.v1
title: Additional file 9 of Effects of artificial light on bird movement and distribution: a systematic map

description: Additional file 9. Articles_Excluded_at_Full_Text.xls has three sheets. The first lists the articles screened on Rayyan QCRI excluded at the full text level, with reasons for exclusion. The second contains the list of articles screen on other platforms excluded at full text, with reasons for exclusion. The third shows a table of the number of studies excluded for each reason. The fourthlists all articles that were excluded from the map because we could not access their full texts.
DOI: 10.6084/m9.figshare.17086946
title: Additional file 3 of Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations

description: Additional file 2. All supplemental tables that are referenced in the text. Each sheet is a separate supplemental table.
DOI: 10.6084/m9.figshare.17086946.v2
title: Additional file 3 of Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations

description: Additional file 2. All supplemental tables that are referenced in the text. Each sheet is a separate supplemental table.
DOI: 10.6084/m9.figshare.17086946.v1
title: Additional file 3 of Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations

description: Additional file 2. All supplemental tables that are referenced in the text. Each sheet is a separate supplemental table.
DOI: 10.6084/m9.figshare.17086952
title: Additional file 5 of Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations

description: Additional file 4. Output of IQ-tree for the TerL phylogenetic trees, with bootstrapping values for each of the branches.
DOI: 10.6084/m9.figshare.17086952.v2
title: Additional file 5 of Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations

description: Additional file 4. Output of IQ-tree for the TerL phylogenetic trees, with bootstrapping values for each of the branches.
DOI: 10.6084/m9.figshare.17086952.v1
title: Additional file 5 of Minnesota peat viromes reveal terrestrial and aquatic niche partitioning for local and global viral populations

description: Additional file 4. Output of IQ-tree for the TerL phylogenetic trees, with bootstrapping values for each of the branches.
DOI: 10.6084/m9.figshare.17205129
title: Additional file 2 of Associations between indicators of socioeconomic position and DNA methylation: a scoping review

description: Additional file 2: Supplemental tables.
DOI: 10.6084/m9.figshare.17205129.v1
title: Additional file 2 of Associations between indicators of socioeconomic position and DNA methylation: a scoping review

description: Additional file 2: Supplemental tables.
DOI: 10.6084/m9.figshare.17205130
title: Additional file 1 of The association between acute fatty liver disease and nitric oxide during malaria in pregnancy

description: Additional file 1: Table S1. Comparative proteomic analysis of livers of immunized pregnant mice infected with P. berghei NK65. Livers were obtained from unimmunized pregnant mice without infection (naïve pregnant mice) and unimmunized non-pregnant mice without infection (naïve virgin mice), and immunized pregnant and non-pregnant mice infected with P. berghei NK65 on day 17 post-mating. Proteins showing one or two peptide spectral matches were excluded. Protein levels were normalized to actin, cytoplasmic 1 (accession: P60710).
DOI: 10.6084/m9.figshare.17205130.v1
title: Additional file 1 of The association between acute fatty liver disease and nitric oxide during malaria in pregnancy

description: Additional file 1: Table S1. Comparative proteomic analysis of livers of immunized pregnant mice infected with P. berghei NK65. Livers were obtained from unimmunized pregnant mice without infection (naïve pregnant mice) and unimmunized non-pregnant mice without infection (naïve virgin mice), and immunized pregnant and non-pregnant mice infected with P. berghei NK65 on day 17 post-mating. Proteins showing one or two peptide spectral matches were excluded. Protein levels were normalized to actin, cytoplasmic 1 (accession: P60710).
DOI: 10.6084/m9.figshare.17205136
title: Additional file 3 of The association between acute fatty liver disease and nitric oxide during malaria in pregnancy

description: Additional file 3: Table S2. Comparative proteomic analysis of livers of immunized pregnant inducible nitric oxide synthase-knockout (iNOS-KO) mice infected with P. berghei NK65. Livers were obtained from immunized pregnant mice infected with P. berghei NK65 on day 17 post-mating. Proteins showing one or two peptide spectral matches were excluded. Protein levels were normalized to actin, cytoplasmic 1 (accession: P60710).
DOI: 10.6084/m9.figshare.17205136.v1
title: Additional file 3 of The association between acute fatty liver disease and nitric oxide during malaria in pregnancy

description: Additional file 3: Table S2. Comparative proteomic analysis of livers of immunized pregnant inducible nitric oxide synthase-knockout (iNOS-KO) mice infected with P. berghei NK65. Livers were obtained from immunized pregnant mice infected with P. berghei NK65 on day 17 post-mating. Proteins showing one or two peptide spectral matches were excluded. Protein levels were normalized to actin, cytoplasmic 1 (accession: P60710).
DOI: 10.6084/m9.figshare.17205165.v1
title: Additional file 1 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 1. Single copy genes from publically available CPR genomes used to predict CPR MAGs in this study. The file was taken from Anvi’o codebase ( https://github.com/merenlab/anvio ).
DOI: 10.6084/m9.figshare.17205165
title: Additional file 1 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 1. Single copy genes from publically available CPR genomes used to predict CPR MAGs in this study. The file was taken from Anvi’o codebase ( https://github.com/merenlab/anvio ).
DOI: 10.6084/m9.figshare.17205168
title: Additional file 2 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 2. Genome statistics and taxonomic assignments of Patescibacteria MAGs in this study.
DOI: 10.6084/m9.figshare.17205168.v1
title: Additional file 2 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 2. Genome statistics and taxonomic assignments of Patescibacteria MAGs in this study.
DOI: 10.6084/m9.figshare.17205171
title: Additional file 3 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 3. The Newick tree file for phylogenetic tree shown in Fig. 3B.
DOI: 10.6084/m9.figshare.17205171.v1
title: Additional file 3 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 3. The Newick tree file for phylogenetic tree shown in Fig. 3B.
DOI: 10.6084/m9.figshare.17205180
title: Additional file 6 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 6. Correlations of average normalized genome coverages of Patescibacteria MAGs enriched in oxic wells with dissolved oxygen and nitrate concentration.
DOI: 10.6084/m9.figshare.17205180.v1
title: Additional file 6 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 6. Correlations of average normalized genome coverages of Patescibacteria MAGs enriched in oxic wells with dissolved oxygen and nitrate concentration.
DOI: 10.6084/m9.figshare.17205183
title: Additional file 7 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 7. Genomic coverages of 1275 microbial MAGs in all studied metagenomes.
DOI: 10.6084/m9.figshare.17205183.v1
title: Additional file 7 of The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

description: Additional file 7. Genomic coverages of 1275 microbial MAGs in all studied metagenomes.
DOI: 10.6084/m9.figshare.17205181
title: Additional file 2 of Development of an exercise programme for balance abilities in people with multiple sclerosis: a development of concept study using Rasch analysis

description: Additional file 2. Pool of 98 balance exercises. File format: xlsx. 98 balance exercises were identified after the literature search. Two authors (KMS, LND) classified involved balance components (such as stability limits, ankle strategy or static balance) indicated with an x.
DOI: 10.6084/m9.figshare.17205181.v1
title: Additional file 2 of Development of an exercise programme for balance abilities in people with multiple sclerosis: a development of concept study using Rasch analysis

description: Additional file 2. Pool of 98 balance exercises. File format: xlsx. 98 balance exercises were identified after the literature search. Two authors (KMS, LND) classified involved balance components (such as stability limits, ankle strategy or static balance) indicated with an x.
DOI: 10.6084/m9.figshare.17205190
title: Additional file 4 of Development of an exercise programme for balance abilities in people with multiple sclerosis: a development of concept study using Rasch analysis

description: Additional file 4. Similarity matrix. File format: xlsx. The number of times a pair of exercises were grouped together and the percentage of participants agreeing with an exercise pairing are shown.
DOI: 10.6084/m9.figshare.17205190.v1
title: Additional file 4 of Development of an exercise programme for balance abilities in people with multiple sclerosis: a development of concept study using Rasch analysis

description: Additional file 4. Similarity matrix. File format: xlsx. The number of times a pair of exercises were grouped together and the percentage of participants agreeing with an exercise pairing are shown.
DOI: 10.18112/openneuro.ds003382.v1.5.0
title: Monash vis-fPET-fMRI
DOI: 10.5281/zenodo.5781949
title: Line-Source Model based Rapid Inversion for Deriving Large Earthquake Rupture Characteristics using High-rate GNSS Observations

description: The high-rate GNSS velocities of three large earthquakes (the 2016 Mw 6.6 Norcia earthquake in central Italy, the 2010 Mw 7.2 EI Mayor-Cucapah earthquake in northern Baja California, and the 2016 Mw 7.8 Kaikoura earthquake in North Canterbury, New Zealand) are included in this repository.
DOI: 10.6084/m9.figshare.17204117
title: Triticale snp.vcf.gz

description: GBS sequencing of Triticale
DOI: 10.6084/m9.figshare.17204117.v1
title: Triticale snp.vcf.gz

description: GBS sequencing of Triticale
DOI: 10.6084/m9.figshare.17205773
title: Supplementary Material for: Clinical Implications of Chromosome 16 Copy Number Variation

description: Chromosome 16 is one of the gene-rich chromosomes; however, approximately 10% of the chromosome 16 sequence is composed of segmental copies, which renders this chromosome instable and predisposes it to rearrangements via frequent nonallelic homologous recombination. Microarray technologies have enabled the analysis of copy number variations (CNV), which may be associated with the risk of developing complex diseases. Through comparative genomic hybridisation in 1,298 patients, we detected 18 cases with chromosome 16 CNV. We identified 2recurrent CNV regions, including 1 at 16p13.11 in 4 patients and another at 16p11.2 in 7 patients. We also detected atypical chromosome 16 rearrangements in 7 patients. Furthermore, we noted an increased frequency of co-occurring genomic changes, supporting the two-hit hypothesis to explain the phenotypic variability in the clinical presentation of CNV syndromes. Our findings can contribute to the creation of a chromosome 16 disease map based on regions that may be associated with disease development.
DOI: 10.5517/ccdc.csd.cc26y17g
title: CCDC 2053695: Experimental Crystal Structure Determination

description: Related Article: Hui Yang, Wen-Lei Xu, Xin-Yi Zeng, Jie Chen, Le Yu, Ling Zhou|2021|Org.Lett.|23|9315|doi:10.1021/acs.orglett.1c03710
DOI: 10.5517/ccdc.csd.cc26y7zd
title: CCDC 2053904: Experimental Crystal Structure Determination

description: Related Article: Hui Yang, Wen-Lei Xu, Xin-Yi Zeng, Jie Chen, Le Yu, Ling Zhou|2021|Org.Lett.|23|9315|doi:10.1021/acs.orglett.1c03710
DOI: 10.5281/zenodo.5782764
title: VC-SLAM Versatile Corpus for Semantic Labeling And Modeling

description: Benchmark Corpus for semantic labeling and modeling. This corpus contains 101 data sets from different open data portals.<br> Each data set consists of the following data: Raw csv data [rawdata_csv] Large json data sample [json_sample_large] Small json data sample [json_sample_small] Raw data in csv format [rawdata_csv] Raw data samples in csv format [rawdata_csv_samples] Mappings to translate between csv and json files [csv_json_mappings] Textual description / Metadata [descriptions] Semantic model as rdf/ttl [semantic_models] Mappings describing mapping between raw data attributes and concepts from the ontology [mappings] List of attributes that have been ignored during modeling [ignored_attributes] Additionally the corpus contains a target ontology as rdf/ttl [ontology]. The individual data sets are licensed by the licenses specified in the attached Excel sheet (DataSetOverview.xlsx) These data are provided "as is", without any warranties of any kind. The data are provided under the Creative Commons Attribution 4.0 International license.
DOI: 10.5281/zenodo.4355562
title: VC-SLAM Versatile Corpus for Semantic Labeling And Modeling

description: Benchmark Corpus for semantic labeling and modeling. This corpus contains 101 data sets from different open data portals.<br> Each data set consists of the following data: Raw csv data [rawdata_csv] Large json data sample [json_sample_large] Small json data sample [json_sample_small] Raw data in csv format [rawdata_csv] Raw data samples in csv format [rawdata_csv_samples] Mappings to translate between csv and json files [csv_json_mappings] Textual description / Metadata [descriptions] Semantic model as rdf/ttl [semantic_models] Mappings describing mapping between raw data attributes and concepts from the ontology [mappings] List of attributes that have been ignored during modeling [ignored_attributes] Additionally the corpus contains a target ontology as rdf/ttl [ontology]. The individual data sets are licensed by the licenses specified in the attached Excel sheet (DataSetOverview.xlsx) These data are provided "as is", without any warranties of any kind. The data are provided under the Creative Commons Attribution 4.0 International license.
DOI: 10.5281/zenodo.5748628
title: Instrument response files for seismic stations in South Korea

description: <strong>Citation</strong> If you use it, please cite the following article in your work: Lim and Kim (2020), A dataset of seismic sensor responses of South Korea seismic stations. Journal of the Geological Society of Korea, 56(4), 515-524, http://dx.doi.org/10.14770/jgsk.2020.56.4.515 (Korean with English abstract) <strong>Example 1 (Seismic Analysis Code)</strong> Examples to deconvolve the instrument response from raw data are below, using the Seismic Analysis Code (SAC, version sac-101.6a). 1. A unit of output is 'm/s' <pre><code>r $input rtr rmean taper TRANS FROM POLEZERO S $pzfile TO none FREQ 0.05 0.1 1.5 3.0 w vel.sac q</code></pre> 2. A unit of output is 'm' <pre><code>r $input rtr rmean taper TRANS FROM POLEZERO S $pzfile TO none FREQ 0.05 0.1 1.5 3.0 TRANS FROM VEL TO NONE w disp.sac q</code></pre> 3. A unit of output is 'm/s2' <pre><code>r $input rtr rmean taper TRANS FROM POLEZERO S $pzfile TO none FREQ 0.05 0.1 1.5 3.0 TRANS FROM VEL TO ACC w acc.sac q</code></pre> Note that the unit of the output is incoherent with the SAC header 'IDEP'. <strong>Example 2 (StationXML with obspy)</strong> <pre><code class="language-python">#!/usr/bin/env python3 from obspy import read_inventory from obspy import read st = read('/path/to/waveforms') inv = read_inventory('ksgn.xml') st.detrend(type="linear") st.detrend(type="demean") pref = [0.1, 0.2, 15, 20] #output = m/s**2 st2 = st.copy() st2.remove_response(inventory=inv,output='ACC',pre_filt=pref,taper=True,zero_mean=False) st2[0].write('acc.sac',format="SAC") #... #output = m/s st2 = st.copy() st2.remove_response(inventory=inv,output='VEL',pre_filt=pref,taper=True,zero_mean=False) st2[0].write('vel.sac',format="SAC") #... #output = m st2 = st.copy() st2.remove_response(inventory=inv,output='DISP',pre_filt=pref,taper=True,zero_mean=False) st2[0].write('disp.sac',format="SAC") #...</code></pre> <strong>Update notes</strong> [1.01] Files for the sensor JC-V100 are provided from Won-Young Kim (2 Dec 2021) Station KS.HA2B is added StationXML file is added (ksgn.xml) [1.00] The files for the KG network are made based on the logs until 12 April 2019 (personal communication with the Korea Institute of Geoscience and Mineral Resources). <strong>Others</strong> Velocity seismometer https://doi.org/10.5281/zenodo.3700312<br> Accelerometer https://doi.org/10.5281/zenodo.3872436
DOI: 10.48370/ofd/0xy0ak/kcgdiu
title: HMW_Rumex_crispus_L._H_3157.jpg

description: :unav
DOI: 10.48370/ofd/0xy0ak
title: Szczaw kędzierzawy (Rumex crispus L.), 3157

description: Herbarium
DOI: 10.48370/ofd/tkhsuw/xiuuse
title: HMW_Rumex_crispus_L._H_2048.jpg

description: :unav
DOI: 10.48370/ofd/tkhsuw
title: Szczaw kędzierzawy (Rumex crispus L.), 2048

description: Herbarium
DOI: 10.48370/ofd/d2ubdn/wjraa8
title: HMW_Rumex_crispus_L._H_1685.jpg

description: :unav
DOI: 10.48370/ofd/d2ubdn
title: Szczaw kędzierzawy (Rumex crispus L.), 1685

description: Herbarium
DOI: 10.48370/ofd/m2lay3/kfnpux
title: HMW_Rumex_crispus_L._H_1570.jpg

description: :unav
DOI: 10.48370/ofd/m2lay3
title: Szczaw kędzierzawy (Rumex crispus L.), 1570

description: Herbarium
DOI: 10.48370/ofd/t349yz/fwqjhg
title: HMW_Rumex_crispus_L._H_1241.jpg

description: :unav
DOI: 10.48370/ofd/t349yz
title: Szczaw kędzierzawy (Rumex crispus L.), 1241

description: Herbarium
DOI: 10.48370/ofd/oawl1g/eovt9n
title: HMW_Rumex_conglomeratus_Murray_H_7705.jpg

description: :unav
DOI: 10.48370/ofd/oawl1g
title: Szczaw skupiony (Rumex conglomeratus Murray), 7705

description: Herbarium
DOI: 10.48370/ofd/vgecgb/l3lz3t
title: HMW_Rumex_conglomeratus_Murray_H_4747.jpg

description: :unav
DOI: 10.48370/ofd/vgecgb
title: Szczaw skupiony (Rumex conglomeratus Murray), 4747

description: Herbarium
DOI: 10.48370/ofd/4qcbbh/ktbey4
title: HMW_Rumex_confertus_x_obtusifolius_H_03884.jpg

description: :unav
DOI: 10.48370/ofd/4qcbbh
title: Rumex confertus x obtusifolius, 3884

description: Herbarium
DOI: 10.11583/dtu.17197772
title: Dataset and NNP-files for "Room temperature structure and energetics of water-hydroxyl layers on Pt(111)"

description: Supplementary files for the publication "Room temperature structure and energetics of water-hydroxyl layers on Pt(111)". The contents are the training set used to train the neural network potentials as well as the neural RuNNer input and output files used for training and running molecular dynamics simulations.
DOI: 10.11583/dtu.17197772.v1
title: Dataset and NNP-files for "Room temperature structure and energetics of water-hydroxyl layers on Pt(111)"

description: Supplementary files for the publication "Room temperature structure and energetics of water-hydroxyl layers on Pt(111)". The contents are the training set used to train the neural network potentials as well as the neural RuNNer input and output files used for training and running molecular dynamics simulations.
DOI: 10.5281/zenodo.5782792
title: Simulation results

description: Asian monsoon simulation
DOI: 10.5281/zenodo.5782791
title: Simulation results

description: Asian monsoon simulation
DOI: 10.14278/rodare.1316
title: Dataset in paper 'FISHMORPH: A global database on morphological traits of freshwater fishes'

description: This dataset is publiched in the paper "FISHMORPH: A global database on morphological traits of freshwater fishes" in Global Ecology and Biogeography (doi.org/10.1111/geb.13395). The FISHMORPH database includes 10 morphological traits measured on 8,342 freshwater fish species, covering 48.69% of the world freshwater fish fauna. It provides the most comprehensive database on fish morphological traits to date. It represents an essential source of information for ecologists and environmental managers seeking to consider morphological patterns of fish faunas throughout the globe, and for those interested in current and future impacts of human activities on the morphological structure of fish assemblages.
description: This study was supported by "Investissement d'Avenir" grants (Centre d'Etude de la Biodiversité Amazonienne, ANR-10-LABX-0025; Towards a unified theory of biotic interactions (TULIP), ANR-10-LABX-41).
DOI: 10.14278/rodare.1315
title: Dataset in paper 'FISHMORPH: A global database on morphological traits of freshwater fishes'

description: This dataset is publiched in the paper "FISHMORPH: A global database on morphological traits of freshwater fishes" in Global Ecology and Biogeography (doi.org/10.1111/geb.13395). The FISHMORPH database includes 10 morphological traits measured on 8,342 freshwater fish species, covering 48.69% of the world freshwater fish fauna. It provides the most comprehensive database on fish morphological traits to date. It represents an essential source of information for ecologists and environmental managers seeking to consider morphological patterns of fish faunas throughout the globe, and for those interested in current and future impacts of human activities on the morphological structure of fish assemblages.
description: This study was supported by "Investissement d'Avenir" grants (Centre d'Etude de la Biodiversité Amazonienne, ANR-10-LABX-0025; Towards a unified theory of biotic interactions (TULIP), ANR-10-LABX-41).
DOI: 10.6084/m9.figshare.17195009.v1
title: Vegetation photosynthetic phenology metrics in northern terrestrial ecosystems: a dataset derived from a gross primary productivity product based on solar-induced chlorophyll fluorescence

description: Data description：<br>This product provides annual (2001-2020) 0.05 degree vegetation photosynthetic phenology (i.e., start of season-SOS; end of season-EOS; length of season-LOS) in terrestrial ecosystems of the Northern Hemisphere.<br>In each rar file, it includes SOS or EOS or LOS of every year (format: nc, NetCDF). In each nc file, including:Phenology metrics with 10% threshold;5th percentile phenology metrics with 10% threshold;<br>95th percentile phenology metrics with 10% threshold;<br>Phenology metrics with 25% threshold;5th percentile phenology metrics with 25% threshold;<br>95th percentile phenology metrics with 25% threshold;Phenology metrics with 50% threshold;5th percentile phenology metrics with 50% threshold;<br>95th percentile phenology metrics with 50% threshold.The file name is the year-metrics-threshold-confidence interval.<br>Any questions about this data can be corresponded to Dr. Jing Fang (jingfang@mail.bnu.edu.cn)<br><br><br>
DOI: 10.6084/m9.figshare.17205845
title: Raw data of bridge maintenance costs.xls

description: To promote the further study of bridge maintenance cost prediction, the original data used in this study was uploaded to the public database under the premise of concealing the specific name and address of the bridges.<br>