cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/cc10nr7n
title: CCDC 943461: Experimental Crystal Structure Determination

description: Related Article: Xiaoyan Chen, Wolfgang Runde|2014|Polyhedron|68|80|doi:10.1016/j.poly.2013.10.015
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nr9q
title: CCDC 943463: Experimental Crystal Structure Determination

description: Related Article: Xiaoyan Chen, Wolfgang Runde|2014|Polyhedron|68|80|doi:10.1016/j.poly.2013.10.015
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrbr
title: CCDC 943464: Experimental Crystal Structure Determination

description: Related Article: Xiaoyan Chen, Wolfgang Runde|2014|Polyhedron|68|80|doi:10.1016/j.poly.2013.10.015
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrcs
title: CCDC 943465: Experimental Crystal Structure Determination

description: Related Article: Xiaoyan Chen, Wolfgang Runde|2014|Polyhedron|68|80|doi:10.1016/j.poly.2013.10.015
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrdt
title: CCDC 943466: Experimental Crystal Structure Determination

description: Related Article: Xiaoyan Chen, Wolfgang Runde|2014|Polyhedron|68|80|doi:10.1016/j.poly.2013.10.015
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrfv
title: CCDC 943467: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrgw
title: CCDC 943468: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrhx
title: CCDC 943469: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrjy
title: CCDC 943470: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrkz
title: CCDC 943471: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrl0
title: CCDC 943472: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrm1
title: CCDC 943473: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrn2
title: CCDC 943474: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrp3
title: CCDC 943475: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrq4
title: CCDC 943476: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrr5
title: CCDC 943477: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc10nrs6
title: CCDC 943478: Experimental Crystal Structure Determination

description: Related Article: Kirill Nikitin, Helge Müller-Bunz, and Michael J. McGlinchey|2013|Organometallics|32|6118|doi:10.1021/om400762f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.5sdhvp
title: Occurrence Download

description: A dataset containing 94827 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((111.23394 -6.78567,110.92021 -7.41983,110.98993 -8.24861,111.71033 -8.36359,111.94272 -8.24861,112.68636 -8.49002,113.00008 -8.39807,113.24409 -8.27161,114.08068 -8.6279,114.32469 -8.63939,114.46412 -8.81166,114.67327 -8.71979,114.49898 -8.55897,114.34793 -8.36359,114.48736 -7.83443,114.22012 -7.68476,113.99935 -7.54656,113.66239 -7.70779,113.44162 -7.66173,113.24409 -7.76536,112.98846 -7.61566,112.77931 -7.50048,112.84903 -7.29307,112.7096 -7.0971,112.61664 -6.90104,112.19834 -6.83182,111.96596 -6.82029,111.55928 -6.6472,111.23394 -6.78567))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 94827 records from 248 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049024-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14624944
title: Results for "Efficient count-based models improve power and robustness for large-scale single-cell eQTL mapping"

description: Results and datasets for jaxQTL paper: Efficient count-based models improve power and robustness for large-scale single-cell eQTL mapping. We provide all cis-SNP-gene pairs summary statistics by cell type and fine-mapping results by cell type. See details in preprint on medRxiv: https://www.medrxiv.org/content/10.1101/2025.01.18.25320755v1
DOI: 10.5281/zenodo.14967637
title: Data from: Biodiversity loss disrupts seasonal carbon dynamics in a species-rich temperate grassland

description: Biodiversity loss poses a significant threat to ecosystem functioning. However, much of the empirical evidence for these effects is based on artificial experiments that often fail to simulate the structure of natural communities. Hence, it is still unclear whether natural diversity losses would significantly affect the functioning of “real world” ecosystems. As subordinate and rare species constitute most of the diversity in natural communities and are often more vulnerable to local extinction, we evaluated their contribution to ecosystem functioning in a naturally species-rich grassland. We focused on two mechanisms by which they can support ecosystem functions: redundancy and complementarity. We conducted two long-term field experiments (> 6 years) simulating contrasting biodiversity loss scenarios through the manual removal of plant species and measured the consequences of species loss on various ecosystem functions related to carbon dynamics. The latter were examined seasonally to explore diversity effects outside the typical peak of vegetation. We found that dominant removal led to substantial reductions in aboveground phytomass and litter production and altered the annual carbon fixation capacity of the vegetation, highlighting the pivotal role of dominant species in driving ecosystem functioning. Despite high species diversity, other species could not fully compensate for the loss of a single dominant even after more than 25 years, challenging assumptions about redundancy. Complementarity effects were not detected at the peak of vegetation but were evident in early spring and autumn when subordinate and rare species enhanced ecosystem functions. Surprisingly, belowground phytomass, soil organic carbon content, and litter decomposition were unaffected by species removal, suggesting complex interactions in belowground processes. These findings underscore the importance of dominant species in maintaining ecosystem functioning and emphasize the need for nuanced approaches to studying biodiversity loss in real-world communities. Comprehensive seasonal measurements are essential for accurately discerning the effects of biodiversity on ecosystem dynamics and informing effective conservation strategies that maintain ecosystem functioning.
DOI: 10.5281/zenodo.14967638
title: Data from: Biodiversity loss disrupts seasonal carbon dynamics in a species-rich temperate grassland

description: Biodiversity loss poses a significant threat to ecosystem functioning. However, much of the empirical evidence for these effects is based on artificial experiments that often fail to simulate the structure of natural communities. Hence, it is still unclear whether natural diversity losses would significantly affect the functioning of “real world” ecosystems. As subordinate and rare species constitute most of the diversity in natural communities and are often more vulnerable to local extinction, we evaluated their contribution to ecosystem functioning in a naturally species-rich grassland. We focused on two mechanisms by which they can support ecosystem functions: redundancy and complementarity. We conducted two long-term field experiments (> 6 years) simulating contrasting biodiversity loss scenarios through the manual removal of plant species and measured the consequences of species loss on various ecosystem functions related to carbon dynamics. The latter were examined seasonally to explore diversity effects outside the typical peak of vegetation. We found that dominant removal led to substantial reductions in aboveground phytomass and litter production and altered the annual carbon fixation capacity of the vegetation, highlighting the pivotal role of dominant species in driving ecosystem functioning. Despite high species diversity, other species could not fully compensate for the loss of a single dominant even after more than 25 years, challenging assumptions about redundancy. Complementarity effects were not detected at the peak of vegetation but were evident in early spring and autumn when subordinate and rare species enhanced ecosystem functions. Surprisingly, belowground phytomass, soil organic carbon content, and litter decomposition were unaffected by species removal, suggesting complex interactions in belowground processes. These findings underscore the importance of dominant species in maintaining ecosystem functioning and emphasize the need for nuanced approaches to studying biodiversity loss in real-world communities. Comprehensive seasonal measurements are essential for accurately discerning the effects of biodiversity on ecosystem dynamics and informing effective conservation strategies that maintain ecosystem functioning.
DOI: 10.5281/zenodo.14968281
title: Results for "Efficient count-based models improve power and robustness for large-scale single-cell eQTL mapping"

description: Results and datasets for jaxQTL paper: Efficient count-based models improve power and robustness for large-scale single-cell eQTL mapping. We provide all cis-SNP-gene pairs summary statistics by cell type and fine-mapping results by cell type. See details in preprint on medRxiv: https://www.medrxiv.org/content/10.1101/2025.01.18.25320755v1
DOI: 10.5281/zenodo.14968265
title: In-Depth Characterization of Human T Cell Populations Utilizing a 35-Color Spectral Panel

description: This panel was created to evaluate the activation status of T cell populations within human samples, either from ex vivo peripheral blood mononuclear cell preparations, or from primary cells cultured ex vivo.  This panel can be used to identify which T cells produce cytokines in response to peptide antigen stimulation, and characterize their cytotoxic or helper subtype, including classification as Th1, Th2, Th9, Tfh, Th17, Th21, or Treg.  Additionally, this panel can characterize the expression of memory, activation, and exhaustion markers within the identified polyclonal T cell populations.

Included are titration data for the 34 antibodies and viability staining, along with a sample full stain of peripheral blood cells.
DOI: 10.15468/dl.cctmsk
title: Occurrence Download

description: A dataset containing 607 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-96.42225 15.29633,-93.05904 15.29633,-93.05904 15.68371,-94.74064 16.74022,-96.42225 15.68371,-96.42225 15.29633))",
 "TaxonKey is Cetacea"
 ]
}

 The dataset includes 607 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005439-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14963467
title: Nanomaterial-Induced Mitochondrial Biogenesis Enhances Intercellular Mitochondrial Transfer Efficiency in Human Mesenchymal Stem Cells

description: Raw data (GraphPad files, confocal images, uncropped western blot images ) of the publication titled "Nanomaterial-Induced Mitochondrial Biogenesis Enhances Intercellular Mitochondrial Transfer Efficiency in Human Mesenchymal Stem Cells"
DOI: 10.15468/dl.t5qqpn
title: Occurrence Download

description: A dataset containing 539 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((-170 5,-50 5,-50 83,-170 83,-170 5))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Brickellia eupatorioides var. corymbulosa (Torr. & A.Gray) Shinners"
 ]
}

 The dataset includes 539 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005481-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10957150
title: Input data for https://github.com/CCSB-DFCI/TF_isoforms_paper

description: The input data for the code at https://github.com/CCSB-DFCI/TF_isoforms_paper which generates the figures in the paper "Widespread variation in molecular interactions and regulatory properties among transcription factor isoforms" to be published in Molecular Cell in 2025. This data directory is just to reproduce the analysis and figures. The supplementary data tables contain the original data in a cleaner format than these files.
DOI: 10.5281/zenodo.10957151
title: Input data for https://github.com/CCSB-DFCI/TF_isoforms_paper

description: The input data for the code at https://github.com/CCSB-DFCI/TF_isoforms_paper which generates the figures in the preprint "Widespread variation in molecular interactions and regulatory properties among transcription factor isoforms" (https://www.biorxiv.org/content/10.1101/2024.03.12.584681v3). This data directory is just to reproduce the analysis and figures. Both the biorxiv and github host the supplementary data tables which contain the original data in a cleaner format than these files.
DOI: 10.5281/zenodo.14968584
title: Input data for https://github.com/CCSB-DFCI/TF_isoforms_paper

description: The input data for the code at https://github.com/CCSB-DFCI/TF_isoforms_paper which generates the figures in the paper "Widespread variation in molecular interactions and regulatory properties among transcription factor isoforms" to be published in Molecular Cell in 2025. This data directory is just to reproduce the analysis and figures. The supplementary data tables contain the original data in a cleaner format than these files.
DOI: 10.5281/zenodo.14783592
title: IODP Expedition 357 Proposal Planning Data

description: Data submitted to the IODP Site Survey Data Bank as part of the planning process for IODP Expedition 357. Only data not available from other repositories or locations are included here. Locations for data in other repositories are indicated in the Metadata cvs file.
DOI: 10.5281/zenodo.14783593
title: IODP Expedition 357 Proposal Planning Data

description: Data submitted to the IODP Site Survey Data Bank as part of the planning process for IODP Expedition 357. Only data not available from other repositories or locations are included here. Locations for data in other repositories are indicated in the Metadata cvs file.
DOI: 10.15468/dl.t6s7je
title: Occurrence Download

description: A dataset containing 81071 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Flora y epífitas presentes en el proyecto Minera de Cobre Quebradona, municipio de Jericó"
 ]
}

 The dataset includes 81071 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005470-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14019015
title: Understanding the Energy Consumption of Cloud-native Software Systems
DOI: 10.5281/zenodo.14968607
title: Vertical variations in enzymatic activity in forest soil

description: --
DOI: 10.5281/zenodo.14968608
title: Vertical variations in enzymatic activity in forest soil

description: --