cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19850069
title: Figure 4 from Synthesis of Cu(OH)<sub>2</sub> nanowires modified by Fe<sub>3</sub>O<sub>4</sub>@SiO<sub>2</sub> nanocomposite via green and innovative method with antibacterial activity and investigation of magnetic behaviours

description: In this study, green synthesis of modified Cu(OH)<sub>2</sub> nanowires by Fe<sub>3</sub>O<sub>4</sub>@SiO<sub>2</sub> core–shell nanospheres was easily performed via chemical reduction. In other words, the direct coating of Cu(OH)<sub>2</sub> on Fe<sub>3</sub>O<sub>4</sub>@SiO<sub>2</sub> was successfully realized without the extra complicated procedures. Various concentrations of synthesized nanocomposites were tested on pathogenic and nosocomial bacteria. In this study, the structural information and characterization of Fe<sub>3</sub>O<sub>4</sub>@SiO<sub>2</sub>/Cu(OH)<sub>2</sub> nanowires (FSCNWs) were obtained using FE-SEM, FT-IR, EDX and X-ray diffraction. This nanocomposite can effectively kill important infectious bacteria, including <i>S. aureus</i>, <i>E. coli Staphylococcus saprophyticus</i>, <i>Pseudomonas aeruginosa</i> and <i>Klebsiella pneumoniae</i>. Studies have shown that FSCNW nanocomposites affect common antibiotic-resistant bacteria. This result confirms the function of FSCNW as an effective, beneficial and environmentally friendly antibacterial agent that can used in a wide range of applications in medicine. FSCNWs can be separated conveniently from bacteria-containing solutions using a magnet. Compared to nanocomposites based on other metals such as silver and gold, the use of FSCNWs in water treatment has been recommended because of the precursor of copper for its low price and less toxicity. In addition to its special properties such as mild reaction conditions, green synthesis methods, admissible magnetic properties, easy separation, high antibacterial activity and beneficial efficiency.
DOI: 10.6084/m9.figshare.19850069.v1
title: Figure 4 from Synthesis of Cu(OH)<sub>2</sub> nanowires modified by Fe<sub>3</sub>O<sub>4</sub>@SiO<sub>2</sub> nanocomposite via green and innovative method with antibacterial activity and investigation of magnetic behaviours

description: In this study, green synthesis of modified Cu(OH)<sub>2</sub> nanowires by Fe<sub>3</sub>O<sub>4</sub>@SiO<sub>2</sub> core–shell nanospheres was easily performed via chemical reduction. In other words, the direct coating of Cu(OH)<sub>2</sub> on Fe<sub>3</sub>O<sub>4</sub>@SiO<sub>2</sub> was successfully realized without the extra complicated procedures. Various concentrations of synthesized nanocomposites were tested on pathogenic and nosocomial bacteria. In this study, the structural information and characterization of Fe<sub>3</sub>O<sub>4</sub>@SiO<sub>2</sub>/Cu(OH)<sub>2</sub> nanowires (FSCNWs) were obtained using FE-SEM, FT-IR, EDX and X-ray diffraction. This nanocomposite can effectively kill important infectious bacteria, including <i>S. aureus</i>, <i>E. coli Staphylococcus saprophyticus</i>, <i>Pseudomonas aeruginosa</i> and <i>Klebsiella pneumoniae</i>. Studies have shown that FSCNW nanocomposites affect common antibiotic-resistant bacteria. This result confirms the function of FSCNW as an effective, beneficial and environmentally friendly antibacterial agent that can used in a wide range of applications in medicine. FSCNWs can be separated conveniently from bacteria-containing solutions using a magnet. Compared to nanocomposites based on other metals such as silver and gold, the use of FSCNWs in water treatment has been recommended because of the precursor of copper for its low price and less toxicity. In addition to its special properties such as mild reaction conditions, green synthesis methods, admissible magnetic properties, easy separation, high antibacterial activity and beneficial efficiency.
DOI: 10.6084/m9.figshare.19772089
title: Detection of Management Practices and Cropping Phases in Wild Lowbush Blueberry Fields Using Multispectral UAV Data

description: Normalized difference vegetation index (NDVI) and normalized difference red-edge index (NDRE) are vegetation indices commonly used in agriculture to provide information on crop’s growth and health. Here, we investigated the sensitivity of both indices to management practices in lowbush blueberry fields. Images of the experimental plots were collected with a multispectral camera installed on an unmanned aerial vehicle. Both NDVI and NDRE values were significantly higher in fertilized plots than in controls (0.88 ± 0.03 vs. 0.79 ± 0.03 for NDVI, and 0.37 ± 0.01 vs. 0.33 ± 0.01 for NDRE) due to fertilization effect on vegetative growth. The increase was higher under mineral than organic fertilization during the two first phases of the cropping system (by ∼0.3 and ∼0.2 for NDVI and NDRE, respectively). NDRE was not affected by thermal pruning and fungicide application but was negatively correlated with Septoria infection level. NDVI was more strongly correlated with stem length than NDRE, but unlike NDRE, NDVI was not impacted by the development of reproductive shoots during the harvest phases. Overall, the results indicate that although both index values are correlated, their sensitivity to changes in canopy characteristics differs depending on the cropping phase. Further research must be conducted to relate these indices to blueberry’s nutrient status.
DOI: 10.6084/m9.figshare.19772089.v1
title: Detection of Management Practices and Cropping Phases in Wild Lowbush Blueberry Fields Using Multispectral UAV Data

description: Normalized difference vegetation index (NDVI) and normalized difference red-edge index (NDRE) are vegetation indices commonly used in agriculture to provide information on crop’s growth and health. Here, we investigated the sensitivity of both indices to management practices in lowbush blueberry fields. Images of the experimental plots were collected with a multispectral camera installed on an unmanned aerial vehicle. Both NDVI and NDRE values were significantly higher in fertilized plots than in controls (0.88 ± 0.03 vs. 0.79 ± 0.03 for NDVI, and 0.37 ± 0.01 vs. 0.33 ± 0.01 for NDRE) due to fertilization effect on vegetative growth. The increase was higher under mineral than organic fertilization during the two first phases of the cropping system (by ∼0.3 and ∼0.2 for NDVI and NDRE, respectively). NDRE was not affected by thermal pruning and fungicide application but was negatively correlated with Septoria infection level. NDVI was more strongly correlated with stem length than NDRE, but unlike NDRE, NDVI was not impacted by the development of reproductive shoots during the harvest phases. Overall, the results indicate that although both index values are correlated, their sensitivity to changes in canopy characteristics differs depending on the cropping phase. Further research must be conducted to relate these indices to blueberry’s nutrient status.
DOI: 10.5281/zenodo.6586018
title: Dataset: Substantial organic and particulate nitrogen and phosphorus export from geomorphologically stable African tropical forest landscapes

description: Raw chemical and stream data from the publication 'Substantial organic and particulate nitrogen and phosphorus export from geomophologically stable African tropical forest landscapes'. Data shows dissolved and particulate nitrogen and phosphorus concentrations of stream waters of two forested first order streams withing the Congo Basin.
DOI: 10.5281/zenodo.6586017
title: Dataset: Substantial organic and particulate nitrogen and phosphorus export from geomorphologically stable African tropical forest landscapes

description: Raw chemical and stream data from the publication 'Substantial organic and particulate nitrogen and phosphorus export from geomophologically stable African tropical forest landscapes'. Data shows dissolved and particulate nitrogen and phosphorus concentrations of stream waters of two forested first order streams withing the Congo Basin.
DOI: 10.34740/kaggle/dsv/3703712
title: Russian Invasion of Ukraine
DOI: 10.5281/zenodo.6028447
title: SextYouth project

description: Data of the SextYouth project financed by Croatian Science Foundation (number 3553).
DOI: 10.5281/zenodo.6028446
title: SextYouth project

description: Data of the SextYouth project financed by Croatian Science Foundation (number 3553).
DOI: 10.5281/zenodo.3757768
title: Dataset: Seasonality, drivers, and isotopic composition of soil CO2 fluxes from tropical forests of the Congo Basin

description: These data sets contain data from soil CO2 flux measurements and its drivers (soil moisture, soil temperature) from lowland and montane tropical forests of the Congo Basin. Additionally, 13C values of soil emitted CO2, SOC, Leaflitter, and stream dissolved CO2 are reported. A Manuscript using these data sets has been submitted to Biogeosciences
DOI: 10.5281/zenodo.3757767
title: Dataset: Seasonality, drivers, and isotopic composition of soil CO2 fluxes from tropical forests of the Congo Basin

description: These data sets contain data from soil CO2 flux measurements and its drivers (soil moisture, soil temperature) from lowland and montane tropical forests of the Congo Basin. Additionally, 13C values of soil emitted CO2, SOC, Leaflitter, and stream dissolved CO2 are reported. A Manuscript using these data sets has been submitted to Biogeosciences
DOI: 10.5281/zenodo.4113895
title: Stable isotope signatures of soil nitrogen on an environmental-geomorphic gradient within the Congo Basin

description: Stable isotope signatures of soil N of three different forest types within the Congo Basin.
DOI: 10.5281/zenodo.4113894
title: Stable isotope signatures of soil nitrogen on an environmental-geomorphic gradient within the Congo Basin

description: Stable isotope signatures of soil N of three different forest types within the Congo Basin.
DOI: 10.15151/esrf-es-824038827
title: Structural Biology at EMBL Grenoble, IBS-CIBB and IAB

description: The proposals covers a broad range of structural biology projects related to pathogen biology, host-pathogen interactions, RNA biology and structure-based drug development that are carried out by PIs at EMBL Grenoble, IBS-CIBB and IAB. The proposers have long-standing experience in the use, as well as the development of beam lines for macromolecular crystallography and have participated in successive BAG applications over the years, mostly at the ESRF but also at other synchrotrons (e.g. Soleil, Petra III, Diamond, SLS).
DOI: 10.15151/esrf-es-782104851
title: XRDCT of a fresh NMC811 cathode particle

description: High resolution XRD-CT dataset for a fresh NMC811 cathode particle.
DOI: 10.15151/esrf-es-779305051
title: Speckle-based directional dark-field tomography on carbon fibre composites

description: Speckle-based imaging (SBI) uses a wavefront marker to create a randomly patterned illumination. Refraction and small-angle scattering by a sample then results in a shift or blur of this pattern. In this experiment, we will use SBI to retrieve 3D dark-field information for evaluating microstructural damage to carbon-fiber-reinforced polymer samples. We have expanded our SBI image retrieval software to model dark-field as anisotropic blurring, allowing us to retrieve directional dark-field projections from SBI data. We will then extract directional, volumetric scattering data, similar to X-ray tensor tomography. This signal is especially useful for materials with a strongly directional microstructure. The experiment will demonstrate the feasibility of retrieving directional 3D dark-field data with SBI, and showcase the method’s experimental advantages for directional dark-field measurements.
DOI: 10.14469/hpc/10518
title: BOB cycle, 2,6-di-Cl-Ph-B and phenylbenzoic acid, wB97XD, GS G = -3879.520332

description: Gaussian 16 calculation
DOI: 10.14469/hpc/10519
title: BOB cycle, o-Cl-Ph-B and phenylbenzoic acid, TS4 @wB97XD, G = -2960.257838 DG = 22.0

description: Gaussian 16 (C01) calculation
DOI: 10.14469/hpc/10520
title: BOB cycle, 2,6-di-Cl-Ph-B and phenylbenzoic acid, wB97XD, GS G =-3879.520326

description: Gaussian 16 (C01) calculation
DOI: 10.14469/hpc/10528
title: BOB cycle, o-H-Ph-B and benzoic acid, TS4, G = -2041.899957 DG =19.8

description: Gaussian 16 (C01) calculation
DOI: 10.6084/m9.figshare.19898107
title: transkrip (1).id.en.docx

description: This is the blank survey and the transcription of online learning communication phenomenology in Indonesia research
DOI: 10.6084/m9.figshare.19898107.v1
title: transkrip (1).id.en.docx

description: This is the blank survey and the transcription of online learning communication phenomenology in Indonesia research
DOI: 10.6084/m9.figshare.19898127.v1
title: <b>SI3Code.rar:</b> from Light flashes and the geometry of specular fish schools

description: the simulation code
DOI: 10.6084/m9.figshare.19898148
title: <b>SI2.xlsx:</b> from Light flashes and the geometry of specular fish schools

description: a list of parameters for the different plots
DOI: 10.6084/m9.figshare.19898148.v1
title: <b>SI2.xlsx:</b> from Light flashes and the geometry of specular fish schools

description: a list of parameters for the different plots
DOI: 10.6084/m9.figshare.19898127
title: <b>SI3Code.rar:</b> from Light flashes and the geometry of specular fish schools

description: the simulation code
DOI: 10.6084/m9.figshare.19898119
title: RepairPattern.md

description: The repair patterns
DOI: 10.6084/m9.figshare.19898119.v1
title: RepairPattern.md

description: The repair patterns
DOI: 10.6084/m9.figshare.19898113
title: Partial replacement of chemical fertilizer by manure maintains maize yield by stimulating root growth in a calcareous soil

description: Data for the paper about the effect of fertilizaiton on maize root.
DOI: 10.6084/m9.figshare.19898113.v1
title: Partial replacement of chemical fertilizer by manure maintains maize yield by stimulating root growth in a calcareous soil

description: Data for the paper about the effect of fertilizaiton on maize root.
DOI: 10.6084/m9.figshare.19898157
title: Data from 'Captive Asian short-clawed otters (Aonyx cinereus) learn to exploit unfamiliar natural prey'

description: Data used in the GLMM and NBDA analyses
DOI: 10.6084/m9.figshare.19898157.v1
title: Data from 'Captive Asian short-clawed otters (Aonyx cinereus) learn to exploit unfamiliar natural prey'

description: Data used in the GLMM and NBDA analyses
DOI: 10.6084/m9.figshare.19898160
title: Example NBDA script from Captive Asian short-clawed otters (<i>Aonyx cinereus</i>) learn to exploit unfamiliar natural prey

description: R file containing code used to run the time of first interaction NBDA analysis
DOI: 10.6084/m9.figshare.19898160.v1
title: Example NBDA script from Captive Asian short-clawed otters (<i>Aonyx cinereus</i>) learn to exploit unfamiliar natural prey

description: R file containing code used to run the time of first interaction NBDA analysis
DOI: 10.6084/m9.figshare.19898163.v1
title: Extraction time analysis GLMM r script from Captive Asian short-clawed otters (<i>Aonyx cinereus</i>) learn to exploit unfamiliar natural prey

description: R file containing code used in the extraction time GLMM
DOI: 10.6084/m9.figshare.19898163
title: Extraction time analysis GLMM r script from Captive Asian short-clawed otters (<i>Aonyx cinereus</i>) learn to exploit unfamiliar natural prey

description: R file containing code used in the extraction time GLMM
DOI: 10.5281/zenodo.6337925
title: Multi-omic machine learning predictor of breast cancer therapy response

description: H&E slides used in the training dataset described in "Multi-omic machine learning predictor of breast cancer therapy response" published in <em>Nature</em>: https://www.nature.com/articles/s41586-021-04278-5 Metadata associated with these images also included in file Slide metadata.xlsx
description: {"references": ["Sammut, SJ. et al. Multi-omic machine learning predictor of breast cancer therapy response. Nature 601, 623\u2013629 (2022)."]}
DOI: 10.5281/zenodo.6337924
title: Multi-omic machine learning predictor of breast cancer therapy response

description: H&E slides used in the training dataset described in "Multi-omic machine learning predictor of breast cancer therapy response" published in <em>Nature</em>: https://www.nature.com/articles/s41586-021-04278-5 Metadata associated with these images also included in file Slide metadata.xlsx
description: {"references": ["Sammut, SJ. et al. Multi-omic machine learning predictor of breast cancer therapy response. Nature 601, 623\u2013629 (2022)."]}
DOI: 10.6084/m9.figshare.19898217
title: Analysis script from Conceptual preferences can be transmitted via selective social information use between competing wild bird species

description: R scripts used in the analysis
DOI: 10.6084/m9.figshare.19898217.v1
title: Analysis script from Conceptual preferences can be transmitted via selective social information use between competing wild bird species

description: R scripts used in the analysis
DOI: 10.6084/m9.figshare.19898220
title: Data from Conceptual preferences can be transmitted via selective social information use between competing wild bird species

description: Flycatcher choices
DOI: 10.6084/m9.figshare.19898220.v1
title: Data from Conceptual preferences can be transmitted via selective social information use between competing wild bird species

description: Flycatcher choices
DOI: 10.6084/m9.figshare.19898170.v1
title: Mulberry Phytochemistry and antioxidant profile

description: TPC and TFC of crude extract
DOI: 10.6084/m9.figshare.19898170
title: Mulberry Phytochemistry and antioxidant profile

description: TPC and TFC of crude extract
DOI: 10.6084/m9.figshare.19898238
title: Correlation Matrix Format from Flexible growth and body mass predict physiological condition at fledging in the synchronously breeding European starling, <i>Sturnus vulgaris</i>

description: Recent studies have reported beneficial carryover effects of juvenile development that predict interspecific survival differences at independence. Yet, traits relating to body size (i.e. morphological traits) have proven to be unreliable predictors of juvenile survival within species. Exploring individual variation of growth trajectories and how they covary with physiology could reveal species-specific developmental modes which have implications for our assessments of juvenile quality. Here, we investigated morphological development of European starlings (<i>Sturnus vulgaris</i>) approaching fledging in relation to three components of physiological condition at independence: aerobic capacity, energy state and oxidative status. We found evidence of flexible mass and wing growth which independently covaried with fledgling energy state and aerobic capacity, respectively. By comparison, tarsus and wing length at fledging were unrelated to any physiological trait, while mass was positively associated with principal component scores that comprised aerobic capacity and energy state. Thus, flexible growth trajectories were consistent with ‘developmental plasticity’: adaptive pre-fledging mass recession and compensatory wing growth, which seemingly came at a physiological cost, while fledgling body mass positively reflected overall physiological condition. This highlights how patterns of growth and absolute size may differently reflect fledgling physiology, potentially leading to variable relationships between morphological traits and juvenile fitness.
DOI: 10.6084/m9.figshare.19898238.v1
title: Correlation Matrix Format from Flexible growth and body mass predict physiological condition at fledging in the synchronously breeding European starling, <i>Sturnus vulgaris</i>

description: Recent studies have reported beneficial carryover effects of juvenile development that predict interspecific survival differences at independence. Yet, traits relating to body size (i.e. morphological traits) have proven to be unreliable predictors of juvenile survival within species. Exploring individual variation of growth trajectories and how they covary with physiology could reveal species-specific developmental modes which have implications for our assessments of juvenile quality. Here, we investigated morphological development of European starlings (<i>Sturnus vulgaris</i>) approaching fledging in relation to three components of physiological condition at independence: aerobic capacity, energy state and oxidative status. We found evidence of flexible mass and wing growth which independently covaried with fledgling energy state and aerobic capacity, respectively. By comparison, tarsus and wing length at fledging were unrelated to any physiological trait, while mass was positively associated with principal component scores that comprised aerobic capacity and energy state. Thus, flexible growth trajectories were consistent with ‘developmental plasticity’: adaptive pre-fledging mass recession and compensatory wing growth, which seemingly came at a physiological cost, while fledgling body mass positively reflected overall physiological condition. This highlights how patterns of growth and absolute size may differently reflect fledgling physiology, potentially leading to variable relationships between morphological traits and juvenile fitness.
DOI: 10.6084/m9.figshare.19898241
title: R code from Flexible growth and body mass predict physiological condition at fledging in the synchronously breeding European starling, <i>Sturnus vulgaris</i>

description: Recent studies have reported beneficial carryover effects of juvenile development that predict interspecific survival differences at independence. Yet, traits relating to body size (i.e. morphological traits) have proven to be unreliable predictors of juvenile survival within species. Exploring individual variation of growth trajectories and how they covary with physiology could reveal species-specific developmental modes which have implications for our assessments of juvenile quality. Here, we investigated morphological development of European starlings (<i>Sturnus vulgaris</i>) approaching fledging in relation to three components of physiological condition at independence: aerobic capacity, energy state and oxidative status. We found evidence of flexible mass and wing growth which independently covaried with fledgling energy state and aerobic capacity, respectively. By comparison, tarsus and wing length at fledging were unrelated to any physiological trait, while mass was positively associated with principal component scores that comprised aerobic capacity and energy state. Thus, flexible growth trajectories were consistent with ‘developmental plasticity’: adaptive pre-fledging mass recession and compensatory wing growth, which seemingly came at a physiological cost, while fledgling body mass positively reflected overall physiological condition. This highlights how patterns of growth and absolute size may differently reflect fledgling physiology, potentially leading to variable relationships between morphological traits and juvenile fitness.