cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.ffbg79cz1
title: Social network inheritance and differentiation in wild baboons

description: Immatures’ social development may be fundamental to understanding
 important biological processes, such as social information transmission
 through groups, that can vary with age and sex. Our aim was to determine
 how social networks change with age and differ between sexes in wild
 immature baboons, group-living primates that readily learn socially. Our
 results show that immature baboons inherited their mothers’ networks and
 differentiated from them as they aged, increasing their association with
 partners of similar age and the same sex. Males were less bonded to their
 matriline and became more peripheral with age compared to females. Our
 results may pave the way to further studies testing a new hypothetical
 framework: in female-philopatric societies, social information
 transmission may be constrained at the matrilineal level by age- and
 sex-driven social clustering.
description: We tested two
 hypotheses on how social networks change in immature (≤ 5 years old) wild
 chacma baboons (<em>Papio ursinus</em>), focusing on (1) the
 inheritance of maternal networks and (2) the shifts in network integration
 and social partner preferences. Social network (and other) data were
 collected between 2014 and 2019 by the Tsaobis Baboon Project (http://tsaobisbaboonproject.org/) on three baboon troops ranging across Tsaobis Nature Park (Namibia). We used social network analysis within a longitudinal framework to build proximity and grooming networks on immature individuals and their mothers. We ran linear and generalised mixed models using the software R 4.0.2.
description: In order to view
 the data and run the analyses, Microsoft Excel or Open Office Calc and the
 software R (version 4.0.2 or above) are needed.
DOI: 10.5061/dryad.6hdr7sr41
title: The role of cell-envelope synthesis for envelope growth and cytoplasmic density in Bacillus subtilis

description: All cells must increase their volumes in response to biomass growth to
 maintain intracellular mass density within physiologically permissive
 bounds. Here, we investigate the regulation of volume growth in the
 Gram-positive bacterium Bacillus subtilis. To increase volume, bacteria
 enzymatically expand their cell envelopes and insert new envelope
 material. First, we demonstrate that cell-volume growth is determined
 indirectly, by expanding their envelopes in proportion to mass growth,
 similarly to the Gram-negative Escherichia coli, despite their
 fundamentally different envelope structures. Next, we studied, which
 pathways might be responsible for robust surface-to-mass coupling: We
 found that both peptidoglycan synthesis and membrane synthesis are
 required for proper surface-to-mass coupling. However, surprisingly,
 neither pathway is solely rate-limiting, contrary to wide-spread belief,
 since envelope growth continues at a reduced rate upon complete inhibition
 of either process. To arrest cell-envelope growth completely, the
 simultaneous inhibition of both envelope-synthesis processes is required.
 Thus, we suggest that multiple envelope-synthesis pathways collectively
 confer an important aspect of volume regulation, the coordination between
 surface growth and biomass growth.
DOI: 10.5061/dryad.m63xsj451
title: Climate warming benefits plant growth but net carbon uptake: Simulation of Alaska tundra and needle leaf forest using LPJ-GUESS

description: Climate warming has important effects on Arctic vegetation, but the roles
 of Arctic vegetation as a carbon sink or source in the future remain
 largely unknown. In this study, we selected the tundra and needle leaf
 forest areas in Alaska to examine vegetation growth and carbon exchange
 using the LPJ-GUESS model. We used flux site data to verify the accuracy
 of GPP and NEE simulated with climate variables, then simulated GPP and
 NEE from 1992 to 2014 and GPP and NEE from 2020 to 2100 under different
 climate scenarios, and compared the GPP and LAI simulated by the model
 with those under future scenarios. We used LPJ-GUESS model to explore the
 importance of climate variables on GPP and NEE.
description: Datasets include:
 -
 Precipitation changes in the future
 - Temperature changes in the
 future - Solar radiation changes in the future
 -
 Simulated and observed NEE and GPP 
 - Monthly NEE and
 GPP -
 Changes in NEE and GPP from 1992 to 2014 
 - Changes in NEE and GPP from
 2020 to 2100 - Comparison of GPP value
 between model simulation and ESM output - Comparison of
 LAI value between model simulation and ESM output -
 Changes in NEE and GPP from 2020 to 2100 by re-driving in ATQ
 - Changes in NEE and GPP from 2020 to 2100 by re-driving in
 PRR
DOI: 10.5061/dryad.t76hdr83p
title: Data from: Comparative host-pathogen associations of Snake Fungal Disease in sympatric species of water snakes (Nerodia)

description: The ascomycete fungus Ophidiomyces ophiodiicola (Oo) is the causative
 agent of ophidiomycosis (Snake Fungal Disease), which has been detected
 globally. However, surveillance efforts in the central U.S., specifically
 Texas, have been minimal. The threatened and rare Brazos water snake
 (Nerodia harteri harteri) is one of the most range restricted snakes in
 the U.S. and is sympatric with two wide-ranging congeners, N.
 erythrogaster transversa and N. rhombifer, in north central Texas; thus,
 providing an opportunity to test comparative host-pathogen associations in
 this system. To accomplish this, we surveyed a portion of the Brazos river
 drainage (~400 river km) over 29 months and tested 150 Nerodia individuals
 for the presence of Oo via quantitative PCR and recorded any potential
 signs of Oo infection. We found Oo was distributed across the entire range
 of N. h. harteri, Oo prevalence was 46% overall, and there was a
 significant association between Oo occurrence and signs of infection in
 our sample. Models indicated adults had a higher probability of Oo
 infection than juveniles and subadults, and adult N. h. harteri had a
 higher probability of infection than adult N. rhombifer but not higher
 than adult N. e. transversa. High Oo prevalence estimates (94.4%) in adult
 N. h. harteri has implications for their conservation and management owing
 to their patchy distribution, comparatively low genetic diversity, and
 threats from anthropogenic habitat modification.
DOI: 10.5518/1493
title: Data to support Activating a High-Spin Iron(II) Complex to Thermal Spin-Crossover with an Inert Non-Isomorphous Molecular Dopant

description: [Fe(bpp)2][ClO4]2 (bpp = 2,6-bis{pyrazol-1-yl}pyridine) is high-spin but [FexNi1−x(bpp)2][ClO4]2 with 26 % Ni doping exhibits a complete, abrupt thermal spin-transition near 250 K.
DOI: 10.5061/dryad.8sf7m0crv
title: The evolution and biological correlates of hand preferences in anthropoid primates

description: The evolution of human right-handedness has been intensively debated for
 decades. Manual lateralization patterns in non-human primates have the
 potential to elucidate evolutionary determinants of human handedness.
 However, restricted species samples and inconsistent methodologies have so
 far limited comparative phylogenetic studies. By combining original data
 with published literature reports, we assembled data on hand preferences
 for standardized object manipulation in 1,786 individuals from 38 species
 of anthropoid primates, including monkeys, apes, and humans. Based on
 that, we employ quantitative phylogenetic methods to test prevalent
 hypotheses on the roles of ecology, brain size and tool use in primate
 handedness evolution. We confirm that human right-handedness represents an
 unparalleled extreme among anthropoids and found taxa displaying
 population-level handedness to be rare. Species-level direction of manual
 lateralization was largely uniform among non-human primates and did not
 strongly correlate with any of the selected biological predictors, nor
 with phylogeny. In contrast, we recovered highly variable patterns of hand
 preference strength, which show signatures of both ecology and phylogeny.
 In particular, terrestrial primates tend to display weaker hand
 preferences than arboreal species. These results challenge popular ideas
 on primate handedness evolution, especially the postural origins
 hypothesis. Furthermore, they point to a potential adaptive benefit of
 disparate lateralization strength in primates, a measure of hand
 preference that has often been overlooked in the past. Finally, our data
 show that human lateralization patterns do not align with trends found
 among other anthropoids, suggesting that unique selective pressures gave
 rise to the unusual hand preferences of our species.
DOI: 10.23668/psycharchives.21603
title: Data for: Waiting for translation: A review of translational research in psychological treatment

description: Data for: Petrule, C., Bittermann, A., Ritter, V., Rief, W., Haberkamp, A. (2026). Waiting for translation: A review of translational research in psychological treatment. Clinical Psychology Review, 102708. https://doi.org/10.1016/j.cpr.2026.102708
description: Translational psychological treatment aims to translate basic research findings and principles into novel psychological interventions, but recent research indicates unrealized potential. To better understand and overcome barriers in this translational process, we systematically reviewed 647 publications from a recently published bibliographic dataset. We took a mixed-methods approach, drawing on a previously proposed conceptual framework for translational research in clinical psychology. Specifically, we identified the exact translational stage of each publication and specified the object of translation, the targeted disorder, the proposed intervention, and the direction of translation. We further analyzed distribution patterns across translational stages and assessed differences in basic psychological subfields. In addition, we examined discussion sections to identify recurring challenges and strategic recommendations regarding the process of translation. Results show that extinction learning, emotion regulation, and inhibitory learning are the most frequently translated basic science constructs, with remarkable bottlenecks between establishing causality and intervention development. Quantitative analyses revealed a non-linear progression through translational stages and the strongest translation pathways from physiological psychology/neuropsychology and experimental psychology. Qualitative analyses identified methodological challenges, including a preference for simpler mechanisms, and conceptual barriers stemming from terminological inconsistencies. We conclude that more systematic approaches to intervention development are needed and propose strategies to accelerate the translation of basic psychological science into effective clinical applications.
DOI: 10.5061/dryad.bvq83bkcj
title: Group augmentation underlies the evolution of complex sociality in the face of environmental instability

description: Although kin selection is assumed to underlie the evolution of sociality,
 many vertebrates—including nearly half of all cooperatively breeding
 birds—form groups that also include unrelated individuals. Theory predicts
 that despite reducing kin structure, immigration of unrelated individuals
 into groups can provide direct, group augmentation benefits, particularly
 when offspring recruitment is insufficient for group persistence. Using
 population dynamic modelling and analysis of long-term data, we provide
 clear empirical evidence of group augmentation benefits favoring the
 evolution and maintenance of complex societies with low kin structure and
 multiple reproductives. We show that in the superb starling (Lamprotornis
 superbus)—a plural cooperative breeder that forms large groups with
 multiple breeding pairs, and related and unrelated non-breeders of both
 sexes—offspring recruitment alone cannot prevent group extinction,
 especially in smaller groups. Further, smaller groups, which stand to
 benefit more from immigration, exhibit lower reproductive skew for
 immigrants, suggesting that reproductive opportunities as joining
 incentives lead to plural breeding. Yet, despite a greater likelihood of
 becoming a breeder in smaller groups, immigrants are more likely to join
 larger groups where they experience increased survivorship and greater
 reproductive success as breeders. Moreover, immigrants form additional
 breeding pairs, increasing future offspring recruitment into the group and
 guarding against complete reproductive failure in the face of
 environmental instability and high nest predation. Thus, plural breeding
 likely evolves because the benefits of group augmentation by immigrants
 generate a positive feedback loop that maintains societies with low and
 mixed kinship, large group sizes, and multiple reproductives.
DOI: 10.5061/dryad.x3ffbg7nh
title: SNP data for Syringa vulgaris genotypes

description: Common lilac (Syringa vulgaris L.) is a popular landscaping plant. In the
 present study, its genotypes were investigated using
 genotyping-by-sequencing (GBS) methodology. Our aim was to obtain a large
 set of SNP markers, to reveal the precise identities of the investigated
 S. vulgaris accessions, and to discover genetic relationships among them.
 The studied plant material included local Finnish, previously unidentified
 accessions, known reference cultivars, and so-called historical accessions
 i.e., old shrubs growing in historic cultural landscapes. We intended to
 verify cultivar names for some valuable local common lilac accessions and
 to provide insights into the history of common lilac cultivation in
 Finland. In the analyses, we used a set of 15,007 SNP markers. First,
 polymorphic information contents (PIC) were calculated (mean 0.190, range
 0.012–0.500 per marker). Then, to investigate genetic relationships among
 genotypes, a phylogenetic tree was constructed, and a principal coordinate
 analysis (PCoA) was conducted. A Bayesian analysis of population structure
 was carried out to determine the number and distribution of genetic
 clusters among samples. Genetic marker data combined with existing
 historical and phenotypic knowledge revealed novel information on the
 unidentified cultivars and on the genetic relationships among studied
 accessions, and solved the arrival and early history of common lilac in
 Finland. Overall, such comprehensive genomic characterization and deep
 understanding of genetic relationships of S. vulgaris can be used when
 utilizing present cultivars and developing new ones in future breeding
 programs.
description: Genotyping by sequencing of 85
 <em>S. vulgaris</em> samples was conducted by using a genome
 profiling service by Diversity Arrays Technology Pty Ltd. (Canberra,
 Australia, http://www.diversityarrays.com), following the
 DArT genotyping protocol. Pairwise
 genetic distances between <em>S. vulgaris</em> genotypes were
 calculated by GenAlEx 6.5. Based on the distance values, a phylogenetic
 tree was constructed and visualized using the Neighbor-Joining method with
 Mega 6. GenAlEx was also
 used to conduct a principal coordinate analysis (PCoA) to investigate
 genetic relationships among genotypes. A Bayesian analysis of
 population structure using software Structure 2.3.4. was carried out to
 determine the number and distribution of genetic clusters among
 samples.
description: Excel
DOI: 10.5061/dryad.573n5tb9w
title: Vegetative cover, light availability, and Buckthorn performance in five forest revegetation treatments

description: Data describing the cover, light availability, and buckthorn performance
 of five forest revegetation treatments (passive restoration, herbaceous
 seeding, sedge planting, shrub planting, and tree planting). 
description: Methods described in "Using plants to control buckthorn
 (<em>Rhamnus cathartica</em>): Improved biotic resistance of
 forests through revegetation" published in <em>Ecological
 Engineering.</em> Abbreviations:
 
 Small_Treatment  Description
 Seeded? Fenced? 
 SF Seeded
 Yes Yes 
 F Control
 No Yes 
 T Tree Yes
 Yes W
 Shrub Yes
 Yes S
 Sedge Yes
 Yes 
 NA = "Not Available" or "Not Applicable" -
 Values were not measured 
 Focal_plant_found
 (Phytometers_Standing) description
 F marked focal
 seedling found NF
 marked focal seedling not found (marker found, but no seedling
 was present - presumed dead) 
 
 leaf_status (Phytometers_Standing)
 description 
 LI Leaves intact 
 LD Leaves damaged (more than 25%
 of leaf area missing) 
 DEAD No leaves present, plant presumed
 dead 
 Exclude_after_this = whether plants were excluded from later
 calculations either because it was used for allometry, damaged by a
 falling tree, or otherwise no longer informative (1=yes)
DOI: 10.15468/dl.dzw7mw
title: Occurrence Download

description: A dataset containing 528 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is POL",
 "TaxonKey is Misgurnus fossilis"
 ]
}

 The dataset includes 528 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003178-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.x69p8czmr
title: The main driver of soil organic carbon differs greatly between topsoil and subsoil in a grazing steppe

description: 1. Soil organic carbon (SOC) dynamics is regulated by a complex interplay
 of factors such as climate and potential anthropogenic activities.
 Livestocks play a key role in regulating the C cycle in grasslands.
 However, the interrelationship between SOC and these drivers remains
 unclear at different soil layers, and their potential relationships
 network have rarely been quantitatively assessed. 2. Here, we completed a
 six-year manipulation experiment of grazing exclusion (no grazing: NG) and
 increasing grazing intensity (light grazing: LG, medium grazing: MG, heavy
 grazing: HG). We measurements of light fraction organic carbon (LFOC) and
 heavy fraction organic carbon (HFOC) in 12 plots along grazing intensity
 in three soil layers (topsoil: 0-10 cm, mid-soil: 10-30 cm, subsoil: 30-50
 cm) to assess their underlying controls. 3. Grazing significantly reduced
 SOC of the soil profile, but with significant depth and time dependencies.
 (1) SOC and SOC stability of the topsoil is primarily regulated by grazing
 duration (years). Specifically, grazing duration and grazing intensity
 increased the SOC lability of topsoil due to an increase in LFOC. (2)
 Grazing intensity was the major factor affecting the mid-soil SOC
 dynamics, among which MG had significantly lower SOC than did NG. (3)
 Subsoil organic carbon dynamics were mainly regulated by climatic factors.
 The increase in mean annual temperature (MAT) may have promoted the
 turnover of LFOC to HFOC in the subsoil. 4. Synthesis and applications.
 When evaluating the impacts of grazing on soil organic fraction, we need
 to consider the differences in sampling depth and the duration of grazing
 years. Our results highlight that the key factors influencing SOC dynamics
 differ among soil layers. Climatic and grazing factors have different
 roles in determining SOC in each soil layer.
DOI: 10.5061/dryad.31zcrjdpk
title: Data from: Examining competition during the agnathan/gnathostome transition using distance-based morphometrics

description: The rise of jawed vertebrates (gnathostomes) and extinction of nearly all
 jawless vertebrates (agnathans) is one of the most important transitions
 in vertebrate evolution, but the causes are poorly understood. Competition
 between agnathans and gnathostomes during the Devonian period is the most
 commonly hypothesized cause; however, no formal attempts to test this
 hypothesis have been made. Generally, competition between species
 increases as morphological similarity increases; therefore, this study
 uses the largest-to-date morphometric comparison of Silurian and Devonian
 agnathan and gnathostome groups to determine which groups were most and
 least likely to have competed. Five agnathan groups (Anaspida,
 Heterostraci, Osteostraci, Thelodonti, and Furcacaudiformes) were compared
 with five gnathostome groups (Acanthodii, Actinopterygii, Chondrichthyes,
 Placodermi, Sarcopterygii) including taxa from most major orders.
 Morphological dissimilarity was measured by Gower’s dissimilarity
 coefficient, and the differences between agnathan and gnathostome body
 forms across early vertebrate morphospace were compared using principal
 coordinate analysis. Our results indicate competition between some
 agnathans and gnathostomes is plausible, but not all agnathan groups were
 similar to gnathostomes. Furcacaudiformes (fork-tailed thelodonts) are
 distinct from other early vertebrate groups and the least likely to have
 competed with other groups.
description: Supplementary table T3: 29 measurements of body form and the
 size, shape, and position of eyes and fins taken from fossil specimens of
 Silurian and Devonian vertebrates using calipers and, in rare cases for
 large specimens, tailor tape. Categorized by Class. Proportions of each
 measurement relative to standard length (tip of the rostrum to the caudal
 peduncle) calculated for each specimen. For taxa with multiple specimens,
 averages were taken. length or leading edge of structures that were absent
 were recorded as "0", distances (from the rostrum) and missing
 measurements (from incomplete specimens) were recorded as "-" or
 not applicable. proportions of 120 taxa used in associated article for
 this data were z-transformed. Supplementary file
 containing additional supplementary tables and figures, with results, are
 included; as is the r-script and necessary files for calculating
 Gower's dissimilarity matrix and Principal Coordinate Analysis, as
 well as correlation coefficients and the coefficient of determination for
 each variable on the first four axes.
description: Supplementary Table T3 is an .xlsx file and can be opened with a
 spreadsheet editor (e.g. Excel, or Google Sheets). Associated metadata can
 be opened with any text editor (e.g. Notepad).
 Supplementary information can be opened with a document editor
 (recommended: Microsoft Word) R-script can be opened
 with R. We recommend R-studio for ease importing datasets and
 packages.