cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1321361
title: Wellcome Trust open access (OA) spend and compliance monitoring: 2013-14

description: Wellcome Trust OA spend for the 2013-2014 year. In addition to simply reporting spend, this year we have run the data through a “compliance monitoring” tool (developed for us by Cottage Labs) to help us determine programmatically whether the paper is in the Europe PMC repository and what licence (if any) is attached to the article. The dataset only includes information when an APC was levied. If an author has self-archived a paper, or the publisher provides a gold OA service (but makes no charge), this information is not included in this dataset. Equally, data are not included in cases where a researcher (based at an institution not in receipt of an OA block grant) received a supplement to their grant to cover OA publishing costs.
DOI: 10.6084/m9.figshare.1321364.v1
title: Wellcome Trust open access (OA) spend and compliance montoring 2013-14: an explanation of the dataset

description: A short "Readme" file that seeks to describe the 2013-14 OA dataset, published in Figshare
DOI: 10.6084/m9.figshare.1321399.v2
title: 2 March 2015 Field Notes

description: Field notes including image and/or video records.
DOI: 10.6084/m9.figshare.1321351
title: LaTeX – A document preparation system

description: My review of LaTeX, 1987
DOI: 10.6084/m9.figshare.1321366.v1
title: Reversible Photo Actuated Bulk Nanocomposite with Nematic Liquid Crystalline Elastomer Matrix

description: Liquid crystal elastomers (LCEs) are excellent actuator materials. However, current LCE materials are generally made in the forms with thin thickness, such as films or fibers, which have limitations in forming actuators. We have developed a bulk LCE material with the three-dimensional elastic skeleton network of polyurethane and the matrix of nematic LCE incorporating single-wall carbon nanotubes (SWCNTs). This LCE nanocomposite bulk (LCENB) exhibited sensitive and reversible photo actuation. It could evenly contract by up to 25% of the initial height under a uniform irradiation, or bend towards the incident light by up to 40° under an asymmetrical irradiation. A photo-driven scanning mirror with superior scanning angle, implementing this LCENB as the actuator, was also demonstrated.
DOI: 10.6084/m9.figshare.1321361.v5
title: Wellcome Trust open access (OA) spend and compliance monitoring: 2013-14

description: Wellcome Trust OA spend for the 2013-2014 year. In addition to simply reporting spend, this year we have run the data through a “compliance monitoring” tool (developed for us by Cottage Labs) to help us determine programmatically whether the paper is in the Europe PMC repository and what licence (if any) is attached to the article. The dataset only includes information when an APC was levied. If an author has self-archived a paper, or the publisher provides a gold OA service (but makes no charge), this information is not included in this dataset. Equally, data are not included in cases where a researcher (based at an institution not in receipt of an OA block grant) received a supplement to their grant to cover OA publishing costs.
DOI: 10.6084/m9.figshare.1321311
title: Bacterial communities in heterosexual couples

description: Bacterial tag-encoded FLX amplicon pyrosequencing analysis of the V4 -V6 region of the 16S rRNA gene using primers 530F: GTGCCAGCMGCNGCGG and 1100R: GGGTTNCGNTCGTTG. Sequence files are in FASTA format. DNA was extracted from penile skin (PS), urethral (UT) and vaginal (VG) specimens from normal (N) women and women with bacterial vaginosis (BV) and their sexual partners.
DOI: 10.6084/m9.figshare.1321399.v3
title: 2 March 2015 Field Notes

description: Field notes including image and/or video records.
DOI: 10.6084/m9.figshare.1321361.v4
title: Wellcome Trust open access (OA) spend and compliance monitoring: 2013-14

description: Wellcome Trust OA spend for the 2013-2014 year. In addition to simply reporting spend, this year we have run the data through a “compliance monitoring” tool (developed for us by Cottage Labs) to help us determine programmatically whether the paper is in the Europe PMC repository and what licence (if any) is attached to the article. The dataset only includes information when an APC was levied. If an author has self-archived a paper, or the publisher provides a gold OA service (but makes no charge), this information is not included in this dataset. Equally, data are not included in cases where a researcher (based at an institution not in receipt of an OA block grant) received a supplement to their grant to cover OA publishing costs.
DOI: 10.6084/m9.figshare.1321302
title: Jihadi John has been identified Co-Retweeted Network

description: The Co-Retweeted network of users tweeting about the claim that "Jihadi John" had been identified as British citizen Mohammed Emwazi.
DOI: 10.6084/m9.figshare.1321298
title: Gill Histopathologies Following Exposure to Nanosilver or Silver Nitrate

description: Fish gill is the site for many crucial physiological functions. It is among the first sites of xenobiotic exposure, and gill histopathological alterations may be detected soon after toxicant exposure. Silver (Ag) is one of the most toxic metals to aquatic organisms mainly due to its ability to disrupt ionic regulation. The goal of this study was to determine the effect of ionic and nanoscale Ag on fathead minnow gills by examining gill histology and Na<sup>+</sup>/K<sup>+</sup>-ATPase immunoreactivity. Fathead minnows were exposed to two measured concentrations of silver nitrate (AgNO<sub>3</sub>: 1.3 or 3.7 μg/L as Ag<sup>+</sup>), citrate silver nanoparticles (citrate-AgNP: 15 or 39 μg/L), and polyvinylpyrrolidone-AgNP (PVP-AgNP) (AgNP: 11 or 50 μg/L). Circulatory disturbances were the most prevalent gill alterations detected and were significantly increased in all Ag treatment groups compared to control. AgNO<sub>3</sub> (1.3 μg/L) was the only treatment that significantly elevated the number of total mucous goblet cells present. In all other Ag treatments, the percent of degenerated goblet cells was significantly increased compared to control. When the sum of all histopathological abnormalities (weighted index) was calculated, all Ag groups displayed a significantly higher index, with citrate-AgNP having the highest toxicity (index of 10 ± 0.32 versus 2.4 ± 0.6 in controls). Gill Na<sup>+</sup>/K<sup>+</sup>-ATPase immunoreactivity was decreased by Ag. These results indicated that both AgNO<sub>3</sub> and AgNP created similar disruptions in gill structure and ionic regulation, possibly due to the ionic Ag portion of each treatment.
DOI: 10.6084/m9.figshare.1321302.v1
title: Jihadi John has been identified Co-Retweeted Network

description: The Co-Retweeted network of users tweeting about the claim that "Jihadi John" had been identified as British citizen Mohammed Emwazi.
DOI: 10.6084/m9.figshare.1321295
title: Code for On the Heterogeneity Bias of Cost Matrices when Assessing Scheduling Algorithms

description: This project contains the code used for the article "On the Heterogeneity Bias of Cost Matrices when Assessing Scheduling Algorithms".
DOI: 10.6084/m9.figshare.1321298.v1
title: Gill Histopathologies Following Exposure to Nanosilver or Silver Nitrate

description: Fish gill is the site for many crucial physiological functions. It is among the first sites of xenobiotic exposure, and gill histopathological alterations may be detected soon after toxicant exposure. Silver (Ag) is one of the most toxic metals to aquatic organisms mainly due to its ability to disrupt ionic regulation. The goal of this study was to determine the effect of ionic and nanoscale Ag on fathead minnow gills by examining gill histology and Na<sup>+</sup>/K<sup>+</sup>-ATPase immunoreactivity. Fathead minnows were exposed to two measured concentrations of silver nitrate (AgNO<sub>3</sub>: 1.3 or 3.7 μg/L as Ag<sup>+</sup>), citrate silver nanoparticles (citrate-AgNP: 15 or 39 μg/L), and polyvinylpyrrolidone-AgNP (PVP-AgNP) (AgNP: 11 or 50 μg/L). Circulatory disturbances were the most prevalent gill alterations detected and were significantly increased in all Ag treatment groups compared to control. AgNO<sub>3</sub> (1.3 μg/L) was the only treatment that significantly elevated the number of total mucous goblet cells present. In all other Ag treatments, the percent of degenerated goblet cells was significantly increased compared to control. When the sum of all histopathological abnormalities (weighted index) was calculated, all Ag groups displayed a significantly higher index, with citrate-AgNP having the highest toxicity (index of 10 ± 0.32 versus 2.4 ± 0.6 in controls). Gill Na<sup>+</sup>/K<sup>+</sup>-ATPase immunoreactivity was decreased by Ag. These results indicated that both AgNO<sub>3</sub> and AgNP created similar disruptions in gill structure and ionic regulation, possibly due to the ionic Ag portion of each treatment.
DOI: 10.6084/m9.figshare.1321298.v3
title: Gill Histopathologies Following Exposure to Nanosilver or Silver Nitrate

description: Fish gill is the site for many crucial physiological functions. It is among the first sites of xenobiotic exposure, and gill histopathological alterations may be detected soon after toxicant exposure. Silver (Ag) is one of the most toxic metals to aquatic organisms mainly due to its ability to disrupt ionic regulation. The goal of this study was to determine the effect of ionic and nanoscale Ag on fathead minnow gills by examining gill histology and Na<sup>+</sup>/K<sup>+</sup>-ATPase immunoreactivity. Fathead minnows were exposed to two measured concentrations of silver nitrate (AgNO<sub>3</sub>: 1.3 or 3.7 μg/L as Ag<sup>+</sup>), citrate silver nanoparticles (citrate-AgNP: 15 or 39 μg/L), and polyvinylpyrrolidone-AgNP (PVP-AgNP) (AgNP: 11 or 50 μg/L). Circulatory disturbances were the most prevalent gill alterations detected and were significantly increased in all Ag treatment groups compared to control. AgNO<sub>3</sub> (1.3 μg/L) was the only treatment that significantly elevated the number of total mucous goblet cells present. In all other Ag treatments, the percent of degenerated goblet cells was significantly increased compared to control. When the sum of all histopathological abnormalities (weighted index) was calculated, all Ag groups displayed a significantly higher index, with citrate-AgNP having the highest toxicity (index of 10 ± 0.32 versus 2.4 ± 0.6 in controls). Gill Na<sup>+</sup>/K<sup>+</sup>-ATPase immunoreactivity was decreased by Ag. These results indicated that both AgNO<sub>3</sub> and AgNP created similar disruptions in gill structure and ionic regulation, possibly due to the ionic Ag portion of each treatment.
DOI: 10.6084/m9.figshare.1321298.v2
title: Gill Histopathologies Following Exposure to Nanosilver or Silver Nitrate

description: Fish gill is the site for many crucial physiological functions. It is among the first sites of xenobiotic exposure, and gill histopathological alterations may be detected soon after toxicant exposure. Silver (Ag) is one of the most toxic metals to aquatic organisms mainly due to its ability to disrupt ionic regulation. The goal of this study was to determine the effect of ionic and nanoscale Ag on fathead minnow gills by examining gill histology and Na<sup>+</sup>/K<sup>+</sup>-ATPase immunoreactivity. Fathead minnows were exposed to two measured concentrations of silver nitrate (AgNO<sub>3</sub>: 1.3 or 3.7 μg/L as Ag<sup>+</sup>), citrate silver nanoparticles (citrate-AgNP: 15 or 39 μg/L), and polyvinylpyrrolidone-AgNP (PVP-AgNP) (AgNP: 11 or 50 μg/L). Circulatory disturbances were the most prevalent gill alterations detected and were significantly increased in all Ag treatment groups compared to control. AgNO<sub>3</sub> (1.3 μg/L) was the only treatment that significantly elevated the number of total mucous goblet cells present. In all other Ag treatments, the percent of degenerated goblet cells was significantly increased compared to control. When the sum of all histopathological abnormalities (weighted index) was calculated, all Ag groups displayed a significantly higher index, with citrate-AgNP having the highest toxicity (index of 10 ± 0.32 versus 2.4 ± 0.6 in controls). Gill Na<sup>+</sup>/K<sup>+</sup>-ATPase immunoreactivity was decreased by Ag. These results indicated that both AgNO<sub>3</sub> and AgNP created similar disruptions in gill structure and ionic regulation, possibly due to the ionic Ag portion of each treatment.
DOI: 10.6084/m9.figshare.1321300.v2
title: 01 March 2015 Field Notes

description: Field notes including image and/or video records.
DOI: 10.6084/m9.figshare.1321295.v3
title: Code for On the Heterogeneity Bias of Cost Matrices when Assessing Scheduling Algorithms

description: This project contains the code used for the article "On the Heterogeneity Bias of Cost Matrices when Assessing Scheduling Algorithms".
DOI: 10.6084/m9.figshare.1321300.v3
title: 01 March 2015 Field Notes

description: Field notes including image and/or video records.
DOI: 10.6084/m9.figshare.1321295.v2
title: Code for On the Heterogeneity Bias of Cost Matrices when Assessing Scheduling Algorithms

description: This project contains the code used for the article "On the Heterogeneity Bias of Cost Matrices when Assessing Scheduling Algorithms".
DOI: 10.6084/m9.figshare.1321270
title: Googling Toubon

description: Script+ data for the analysis of the impact of decisions of the French "commission générale de terminologie" on the use of anglicisms in the French google books corpus.
DOI: 10.6084/m9.figshare.1321300.v4
title: 01 March 2015 Field Notes

description: Field notes including image and/or video records. Original versions of all videos are available as of 20 Jan 2016 following the increase in allowed file size by figshare.
DOI: 10.6084/m9.figshare.1321250
title: Achelata Supertree Data

description: Supporting data files and information for the Achelata supertree.
DOI: 10.6084/m9.figshare.1321270.v1
title: Googling Toubon

description: Script+ data for the analysis of the impact of decisions of the French "commission générale de terminologie" on the use of anglicisms in the French google books corpus.
DOI: 10.6084/m9.figshare.1321238
title: Gaussian Job Archive for CH11NO5

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1321244
title: Googling Toubon

description: Data used with script that analyzes the impact of decisions of the French "commission générale de terminologie" on the use of anglicisms in the French google books corpus.
DOI: 10.6084/m9.figshare.1321238.v1
title: Gaussian Job Archive for CH11NO5

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.1321244.v1
title: Googling Toubon

description: Data used with script that analyzes the impact of decisions of the French "commission générale de terminologie" on the use of anglicisms in the French google books corpus.
DOI: 10.6084/m9.figshare.1321211
title: 4D/BTi headshape file

description: This is a 4D/BTi headshape file of representative subject, which can be used in combination with HCP MEG data for software that requires a hs_file. The headshape of HCP subjects is not released due to privacy restrictions. The headshape of HCP subjects is also not required for coregistration, since the coregistration is already done and transformations between various coordinate systems are shared in the anatomy package of each HCP subject.
DOI: 10.6084/m9.figshare.1320986
title: Pig (Sus scrofa) lincRNAs

description: Identified by Zhou et al. Full Text (PDF) : http://gbe.oxfordjournals.org/content/early/2014/06/02/gbe.evu113.short?rss=1
DOI: 10.6084/m9.figshare.1320987
title: ALDB: a domestic-animal long noncoding RNA database

description: <strong>Introduction</strong> The domestic-animal lncRNA database (ALDB) is the first comprehensive database with a focus on the domestic-animal lncRNAs. ALDB currently comprises 12,103 pig lincRNAs, 8,923 chicken lincRNAs, and 8,250 cow lincRNAs, which we have identified using computational pipeline in this study. Moreover, ALDB provides related useful data, such as genome-wide expression profile and animal quantitative trait loci (QTLs), that is not available in the existing lncRNA database (lncRNAdb and NONCODE), along with convenient tools, such as BLAST, GBrowse and flexible search functionalities. <strong>This published compressed file(.zip) includes the following files:</strong><strong><br></strong> <strong>Pig (Sus scrofa) lincRNAs</strong> Pig lincRNAs (on SS_10.2 in GFF3 format)<br> Pig lincRNAs (on SS_10.2 in GTF format)<br> Pig lincRNAs (in fasta format) Pig lincRNAs (on SS_10.2 in GTF format) [Identified by Zhou et al. ] <strong>Chicken (Gallus gallus) lincRNAs</strong> Chicken lincRNAs (on GG_4.0 in GFF3 format)<br> Chicken lincRNAs (on GG_4.0 in GTF format)<br> Chicken lincRNAs (in fasta format) <strong>Cow (Bos taurus) lincRNAs</strong> Cow lincRNAs (on UMD_3.1 in GFF3 format)<br> Cow lincRNAs (on UMD_3.1 in GTF format)<br> Cow lincRNAs (in fasta format) <strong>Pig (Sus scrofa) expression</strong> Pig FPKM expression levels, derived from ERA178851 using TopHat and Cufflinks<br> Pig count expression levels, derived from ERA178851 using SummaryOverlaps <strong>Chicken (Gallus gallus) expression</strong> Chicken FPKM expression levels, derived from SRA059960 using TopHat and Cufflinks<br> Chicken count expression levels, derived from SRA059960 using SummaryOverlaps <strong>Cow (Bos taurus) expression</strong> Cow FPKM expression levels, derived from SRA059960 using TopHat and Cufflinks<br> Cow count expression levels, derived from SRA059960 using SummaryOverlaps <strong>CNCI of lincRNA transcripts</strong> ALDB_pig_lincRNAs_with_CNCI<br> ALDB_chicken_lincRNAs_with_CNCI<br> ALDB_cow_lincRNAs_with_CNCI
DOI: 10.6084/m9.figshare.1320934
title: Single Scattering Albedo Monitor for Airborne Particulates

description: ABSTRACTWe describe a robust, compact, field deployable instrument (the CAPS PM<sub>ssa</sub>) that simultaneously measures airborne particle light extinction and scattering coefficients and thus the single scattering albedo (SSA) on the same sample volume. With an appropriate change in mirrors and light source, measurements have been made at wavelengths ranging from 450 to 780 nm. The extinction measurement is based on cavity attenuated phase shift (CAPS) techniques as employed in the CAPS PM<sub>ex</sub> particle extinction monitor; scattering is measured using a integrating nephelometry by incorporating a Lambertian integrating sphere within the sample cell. The scattering measurement is calibrated using the extinction measurement. Measurements using ammonium sulfate particles of various sizes indicate that the response of the scattering channel with respect to measured extinction is linear to within 1% up to 1000 Mm<sup>−1</sup> and can be extended further (4000 Mm<sup>−1</sup>) with additional corrections. The precision in both measurement channels is less than 1 Mm<sup>−1</sup> (1s, 1σ). The truncation effect in the scattering channel, caused by light lost at extreme forward/backward scattering angles, was measured as a function of particle size using monodisperse polystyrene latex particles (n=1.59). The results were successfully fit using a simple geometric model allowing for reasonable extrapolation to a given wavelength, particle index of refraction and particle size distribution, assuming spherical particles. For sub-micron sized particles, the truncation corrections are comparable to those reported for commercial nephelometers. Measurements of the optical properties of ambient aerosol indicate that the values of the SSA of these particles measured with this instrument (0.91±0.03) using scattering and extinction agreed within experimental uncertainty with those determined using extinction measured by this instrument and absorption measured using a Multi-Angle Absorption Spectrometer (0.89±0.03) where the uncertainties are derived from best estimates of the accuracy of the two approaches.
DOI: 10.6084/m9.figshare.1320986.v1
title: Pig (Sus scrofa) lincRNAs

description: Identified by Zhou et al. Full Text (PDF) : http://gbe.oxfordjournals.org/content/early/2014/06/02/gbe.evu113.short?rss=1
DOI: 10.6084/m9.figshare.1320945
title: What can their eyes tell us? Assessing the relationship between eye spotting, age, and breeding location of Golden-winged Warblers

description: We quantified the amount of white around the eyes of golden-winged warblers to see if it changed over a latitudinal gradient.
DOI: 10.7925/drs1.duchas_5008814
title: Dulargy

description: A collection of folklore and local history stories from Dulargy (school) (Doolargy, Co. Louth), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher James Mc Creesh.
description: An Dúleargaidh -- Bellurgan -- Baile Mhic Scanláin - Village -- Proleek - Bru Leac -- Ballymakellet -- Anaverna -- Anaverna -- Ravensdale Park -- Feede -- Aghnaskeagh -- Drumnasilliagh -- Drumnacarra -- Stories -- Stories -- Stories -- Stories -- Bellurgan - Deerpark -- Doolargy -- Doolargy - Story -- Doolargy -- Stories -- Stories -- Stories -- Stories -- Stories -- Stories -- Stories -- Stories -- Stories -- Stories -- Stories
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5008815
title: Achadh Mín, Dundalk

description: A collection of folklore and local history stories from Achadh Mín, Dundalk (school) (Aghameen, Co. Louth), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher Bean Uí Riada.
description: Story / Rice, Joe -- Mass Rock / Rice, Moira -- Legend of the Long Woman's Grave / Rice, Joe -- Sweat-House / Keenan, Mary -- Penal Days / Rice, Joe -- Phantom Ship of Carlingford Lough / Rice, Joe -- Local Place Names -- Local Marriage Customs / Rice, Joe -- Bonfires / Rice, Joe -- Local Patron Saint / Rice, Joe -- John the Priest Hunter / Rice, Joe -- Proverbs -- Care of Our Farm Animals -- Riddles / Rice, Moira -- Riddles / Rice, Joe -- Story / Rice, Sheila
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_4954297
title: Local Happening

description: Story collected by Anthony Martin, a student at Stoneyford, Thomastown school (Stonyford, Co. Kilkenny) from informant James Martin.
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Finghín Mac Íobhair.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.