cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/sjxzvn4zbs
title: Heat abatement during the pre-weaning period: Effects on growth, feed efficiency, and metabolites of male Holstein calves

description: Heat stress abatement strategies for pre-weaned dairy calves are seldom evaluated. We conducted an experiment to evaluate the effects of heat stress abatement during the pre-weaning phase on calf hood performance. The hypotheses of the current experiment were that provision of solid shade and solid shade + fans would reduce air temperature and increase air speed to the extent that it would improve growth and feed efficiency of pre-weaned male Holstein calves compared with calves housed outside. In addition, we hypothesized that provision of fans would improve air quality, measured by reduce air ammonia (NH3) concentration and bacterial counts, to the extent that it would improve health of calves. The objectives of the current experiment were to evaluate the effects of provision of solid shade and solid shade + fans on growth and feed efficiency. Furthermore, we aimed to determine the effect of provision of fans on NH3 concentration and bacteria counts in the air and health scores during the pre-weaning phase. The environmental conditions during our experiment were representative of heat stress. The provision of heat stress abatement through shade + fans increased air velocity by nearly 3-fold, but it only reduced the air temperature by 1.3 to 3.2 °C. Thus, throughout the experiment and within 24-h periods, calves from all treatments were exposed to heat stress. This may be the reason why we did not detect an effect of treatment on feed intake, ADG, feed efficiency, and BW at weaning. The heat abatement strategies used in this experiment, however, improved welfare and health of calves measured by rectal temperature, respiratory frequency, and URTS. An important finding of our experiment that warrants further investigation was the difference in wither height at weaning between the HS and SHF treatments. We speculate that this could be a consequence of heat stress induced changes in post-absorptive nutrient partitioning and/or bone metabolism, but these theories remain to be proved.
DOI: 10.17632/v3c7byb755
title: Alopecia Areata and COVID-19 Supplemental Table 1.

description: Race and Ethnicity stratification of COVID-19 infection rate and hospitalization rate of alopecia areata (AA) patients and non-AA patients.
DOI: 10.17632/38bvbsgprs
title: Linking_microstructure_excitability

description: Example dataset to manuscript "Linking microstructural integrity and motor cortex excitability in multiple sclerosis" by Radetz et al., including T1-, T2- and diffusion-weighted images of a healthy participant.
DOI: 10.17632/xd2k92sgjr
title: Northern Wheatear and European Rabbit (extract from Atlas of Early Modern Wildlife)

description: This is an extract from my Atlas of Early Modern Wildlife. It lists all the sources used in the current (May 2021) version of the Atlas, but gives full references for just two species, the Northern Wheatear (Oenanthe oenanthe) and the European Rabbit (Oryctolagus cuniculus).
DOI: 10.17632/5h9z2bfrch
title: SPI review-data collection

description: These are the data which collected and analysed from literature review
DOI: 10.17632/b9kkc3dpkp
title: A Vein-hosted Carbonate Geochemical, Isotopic and Geochronologoical Record of Late Miocene to Pleistocene Hydrothermal Activity in the Hajar Mountains (Jabal Akhdar Dome, Sultanate of Oman)

description: These data are used for the submitted manuscript "A Vein-hosted Carbonate Geochemical, Isotopic and Geochronological Record of Late Miocene to Pleistocene Hydrothermal Activity in the Hajar Mountains (Jabal Akhdar Dome, Sultanate of Oman)" to Tectonics.
DOI: 10.17632/n4k6wywftg
title: Supplemental materials of Regulatory T cells regulated by adenosine A2A receptor

description: Objective: the purpose of this study is to provide a further understanding the mechanisms of adenosine A2A receptor agonist on Treg cells and the important of adenosine A2A receptor to Treg cells. Methods: we first retrieved the GSE34006 data, which was discussed about the role of adenosine A2A receptors on regulatory T (Treg) cells, from the Gene Expression Omnibus database. Then we analyzed the differential expression genes (DEGs) among groups by limma package of R software. The criterions for DEGs were adjusted P-value &lt; 0.05 and | log2fold-change (FC) | ≥1. DAVID Bioinformatics Resources 6.8and BiNGO of Cytoscape 3.8.0 were used to analyze the Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways for these DEGs. STRING version 11.0 database was used to construct protein-protein interaction (PPI) network of DEGs and make the network for visualization. The Hub genes in the PPI network were determined according the degree centrality and betweenness centrality as calculated by the cytoHubba 0.1 and MCODE of Cytoscape 3.8.0. Result: There were 249 DEGs involved in Treg cells regulated by adenosine A2A receptor, including 163 genes upregulated and 86 genes downregulated. These DEGs were enriched to 75 Go terms (Biological Process 55; Cellular Component 7 and Molecular Function 13) and 5 pathways were enriched: TNF signaling pathway, TGF-beta signaling pathway, transcriptional misregulation in cancer, cytokine-cytokine receptor interaction and pertussis. In the PPI network, Fos, Stat5a, Crbpb and Il10 were the Hub genes and all were upregulated. Conclusion: The GO analysis and KEGG pathway enriched by DEGs may reveal the functions of adenosine A2A receptor on Treg cells and the Hub genes, Fos, Stat5a, Crbpb and Il10 were the key factors for regulation of adenosine A2A receptor on Treg cells. However, it still needs to be confirmed by the next more rigorous molecular biological experiments research.
DOI: 10.17632/nxbwdmh99x
title: Supplementary file 5 (Thesis)

description:  List of GO terms over-represented in lists of genes differently expressed in LE, GE and ST cells from high and low progesterone cows
DOI: 10.17632/jvct3269nz
title: Supplementary Figure 1

description: Methods 
To calculate overall power, surface EMG data were digitally bandpass filtered from 10-250Hz and then rectified. EEG data were digitally bandpass filtered between 0.5-100Hz (Kenville et al., 2020) prior to power analyses. EEG power was calculated as the squared amplitude of the signal in both the alpha (8-12Hz) and beta frequency (15-35Hz) ranges. Two-way ANOVAs with factors of Protocol and Time were run separately for females and males for alpha and beta power at the Cz electrode. For all other power analyses, data from females and males were pooled for the two-way ANOVAs. 

Results 
A Protocol by Sex interaction was found for alpha power at the Cz electrode location (F(1,14) = 9.117, p = 0.009). A main effect of Protocol was found for males (F(1,7) = 7.327, p = 0.030). Alpha power was not different between protocols at the beginning of the contractions, but, during the last minute, was higher for the matched-torque than matched-EMG contraction (t(7) = 2.650, p = 0.033). No Protocol by Time or main effect of Time was found for males. For females, alpha power did not have an interaction or main effects. 
Beta power at the Cz electrode location had a Protocol by Sex by Time interaction (F(1,14) = 11.235, p = 0.005). For males, there was a Protocol by Time interaction (F(1,7) = 17.368, p = 0.004) and a main effect of Time (F(1,7) = 6.242, p = 0.041), but not a main effect of Protocol. During the final minute of the contraction, beta power was higher for the matched-torque (t(7) = −3.934, p = 0.006), but not the matched-EMG contraction. Females did not have an interaction or main effects. 
A Time by Protocol interaction and main effects of Protocol and Time were found for biceps brachii power in both the alpha (Interaction: F(1,15) = 7.071, p = 0.018; Protocol: F(1,15) = 6.895, p = 0.019; Time: F(1,15) = 19.336, p &lt; 0.001;) and beta (Interaction: F(1,15) = 22.284, p &lt; 0.001; Protocol: F(1,15) = 9.605, p = 0.007; Time: F(1,15) = 38.660, p &lt; 0.001) frequency ranges. Power was greater at the end compared to the beginning of the matched-torque contraction for both the alpha (t(15) = −3.649, p = 0.002) and beta (t(15) = −6.341, p &lt; 0.001) ranges. In contrast, power in both the alpha and beta ranges did not increase during the matched-EMG contraction. Alpha and beta power were not different between contraction types during the first minute; however, both alpha (t(15) = 3.947, p = 0.001) and beta (t(15) = 5.405, p &lt; 0.001) power were higher for the matched-torque than matched-EMG contraction during the last minute. 
For triceps brachii, alpha power had neither an Interaction nor main effects. Beta power had a main effect of Protocol (F(1,15) = 5.785, p = 0.030), but not an interaction or main effect of Time. Beta power was not different between contractions during the first minute, but was higher during the last minute for the matched-torque compared to matched-EMG contraction (t(15) = 2.857, p = 0.012).
DOI: 10.17632/v6782r2zf7
title: Ixekizumab-induced urticaria is associated with the short duration of remission in psoriasis by activation of mast cells- Supplemental Data

description: "Ixekizumab-induced urticaria is associated with the short duration of remission in psoriasis by activation of mast cells"
Supplemental Data for JAAD Article
DOI: 10.17632/2bjxjrt4zf
title: (p)ppGpp controls stringent factors by exploiting antagonistic allosteric coupling between catalytic domains. Roghanian et al.

description: Data associated with "(p)ppGpp controls stringent factors by exploiting antagonistic allosteric coupling between catalytic domains". Uncut images of the TLC plates shown in Figures 2 and S4. Plates shown in Figures 2, 4, 5, S4, and S6. Uncut Western blot and SDS-PAGE from Figures 4 and S2, respectively.
DOI: 10.17632/ks2n45rmyf
title: DNA alignments of annual Alyssum (Brassicaceae) species.

description: ITS_alignment_Alyssum_annuals.txt: Sequence alignment of the ITS1-5.85S-ITS2 region of nrDNA of annual Alyssum species and related taxa in the nexus format. rpoB_trnC_alignment_Alyssum_annuals.txt: Sequence alignment of the rpoB-trnC intergenic spacer of cpDNA in annual Alyssum species and related taxa in the nexus format. DET1_alignment_Alyssum_annuals.txt: Sequence alignment of the nuclear single-copy DET1 gene in annual Alyssum species and related taxa in the nexus format.
DOI: 10.17632/nbsdht6y36
title: LINF_250024700

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/9k4m5w85zk
title: Perceived Barriers and Facilitators Affecting Utilisation of Radiation Therapy Services: Scoping Review Findings - Health Professional Influences_RAW DATA

description: The following document contains the raw data of 225 studies that identified health professional influences as impacting the utilisation of radiation therapy. This data has been synthesised in the Scoping Review " Perceived Barriers and Facilitators Affecting Utilisation of Radiation Therapy Services: Scoping Review Findings- Health Professional Influences" by L. Cramp, T. Burrows and Y. Surjan.
DOI: 10.17632/mpsz8pjg79
title: Microstructure and tensile properties of fine-grained copper

description: Microstructure and tensile properties of fine-grained copper fabricated by thermomechanical consolidation of copper nanopowder/micron-sized powder blend
DOI: 10.17632/9s3jty3wxm
title: Raw data

description: Raw data for western blot.
DOI: 10.17632/42vvyryf84
title: LINF_280014300

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/bkz6jvfwsr
title: Simulation of piezoelectric fan bidirectional flow-solid coupling in confined space

description: Based on ANSYS Workbench numerical simulation platform, numerical simulation work has been carried out around the intrinsic correlation mechanisms and laws of non-constant flow field, nonlinear aerodynamic force, amplitude response and heat transfer characteristics of piezoelectric fan flow-solid coupling under different confined environments.
DOI: 10.17632/d3thy28yc2
title: Bathymetry of the southern part of the Baltic Sea in the vicinity of the Coastal Research Station (CRS) in Lubiatowo - April, 2023

description: Date of the measuring works: April 22 – 24, 2023 Format: dBASE Table, structure: ID, X, Y, Z
The coordinates of the vertices of the polygon: 17,806° E 54,831° N, 17,803° E 54,836° N, 17,853° E 54,845° N, 17,856° E 54,840° N
Coordinate system: The Polish height coordinate system Kronsztad 86 (PL-KRON86-NH) and the horizontal coordinate system WGS 84 UTM 33 (PL-UTM-33). 
Conditions during the measurements on April, 2023:
Wave direction: N-W
Wave height [m]: 0.2
Wind direction: N-W, S-W 
Wind velocity [m/s]: 2 - 7 
Grid resolution: 0,25m x 0,25m
The measurements were carried out with a multibeam Norbit Winghead i77 at a frequency of 400 kHz. During the measurements, 21 profile passes were made, each 3500 m long and spaced every 20 m. The Echo sounder was mounted centrally on the bow of the boat. 
Before measurements, the echo sounder was calibrated on the Margaret wreck. Prior to calibration and measurements, the sound velocity was measured in a water column at intervals of 0.2 m (by use of SWIFT SVP VALEPORT). RTK corrections were downloaded from Leica SmartNet, which resulted in a position accuracy of up to 2 - 5 cm. A positioning compensator Applanix OceanMaster was also used to support positioning.
DOI: 10.17632/n8ftvjj4v5
title: LINF_320020400

description: Microtubule-binding protein MIP-T3
Leishmania infantum (strain JPCM5)
DOI: 10.17632/vs4c5gtns9
title: Seasonal Trends in Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS)

description: Supplemental Table 1, Figure 1 for 'Seasonal Trends in Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS)' manuscript in the Journal of the American Academy of Dermatology
DOI: 10.17632/73nbvs8925
title: Ras/MAPK signalling intensity defines subclonal fitness in a mouse model of primary and metastatic hepatocellular carcinoma

description: Raw data from figures 1 to 5 Lozano et al 2021
DOI: 10.17632/b8wwpgdh89
title: Research Data

description: Source of Research Data: Author from the World Development Indicators (WDI), Notre Dame Global Adaptation Institute (ND-GAIN), and Greater Mekong Sub-region (GMS) Secretariat estimates.
DOI: 10.17632/8sw4hpnm39
title: Remodeling of the Fatty Acid Moiety of Ganglioside GM1 Reveals its Cholesterol Biosynthesis Regulation Mechanism Through ERBB4-Activated SREBP2 Up-regulation in Neuro2a Cells

description: Remodeling of the Fatty Acid Moiety of Ganglioside GM1 Reveals its Cholesterol Biosynthesis Regulation Mechanism Through ERBB4-Activated SREBP2 Up-regulation in Neuro2a Cells
DOI: 10.15468/dl.bsnhu8
title: Occurrence Download

description: A dataset containing 167 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phataginus tetradactyla (Linnaeus, 1766)"
 ]
}

 The dataset includes 167 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025524-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/csb2w8f53m
title: When the heart inhibits the brain: cardiac phases modulate Short-interval intracortical inhibition

description: Background: The phasic cardiovascular activity influences the central nervous system through the systolic baroreceptor inputs, inducing widespread inhibitory effects on behaviour. Despite this, few studies assessed how the cardiac systole affects neurotransmission within our nervous system. Hypothesis: Phasic systolic baroreceptor inputs affect the motor system through intracortical-inhibition modulation, in particular of fast-acting inhibitory postsynaptic potentials GABAA neurotransmission. Methods: Through Transcranial magnetic stimulation (TMS) delivered during resting-state over the left primary motor cortex and across the different cardiac phases, we measured corticospinal excitability-(CSE) and distinct indices of intracortical motor inhibition: short-(SICI) and long-(LICI) interval, corresponding to GABAA and GABAB neurotransmission, respectively. Results: We found a significant interaction between the cardiac phase and intracortical inhibition specific for SICI only. SICI was stronger at systole than at diastole. Conclusions: These results show a tight relationship between the cardiac cycle and the inhibitory neurotransmission within M1, and in particular with GABAA–ergic mediated motor inhibition.
DOI: 10.17632/g676frd5d5
title: GLS1 filament formation facilitates glutamine deprivation induced cell death. Jiang et al

description: Unprocessed and uncompressed imaging data for manuscript "GLS1 filament formation facilitates glutamine deprivation induced cell death"
DOI: 10.17632/njkjkybrx2
title: Data for: Highly siderophile elements and Os isotope constraints on the genesis of peridotites from the Kızıldağ ophiolite, southern Turkey

description: This table is the Major oxide compositions (wt.%) of minerals from the Kızıldağ ophiolite, SE Turkey
DOI: 10.17632/3fgjk8k7rp
title: LINF_060018800

description: pteridine transporter; Leishmania infantum
DOI: 10.17632/c45g8xgrwc
title: LINF_160014400

description: Nucleolar protein NOP52 | RRP1 Leishmania infantum (strain JPCM5)
DOI: 10.17632/kzzszbs3ws
title: Mutant FOXO1 Controls an Oncogenic Network via Enhancer Accessibility

description: Raw data used to create figures in Layden et al., Cell Genomics. 2024
DOI: 10.17632/m492n6ykkv
title: Screening and polyphasic identification of locally isolated Aspergillus niger ANO-5 for optimum citric acid production

description: Supplementary Data 1: Supplementary data for "Selection of isolate for citric acid production"								
Supplementary Data 2: Supplementary data for "Selection of appropriate medium for citric acid production"								
Supplementary Data 3: Supplementary data for "Selection of nitrogen source for optimum citric acid production"									
Supplementary Data 4: Supplementary data for "Optimum fermentation period for citric acid production"
DOI: 10.17632/snzdrrc448
title: A multi-omic single-cell landscape of cellular diversification in the developing human cerebral cortex

description: We conducted single-cell Multiome ATAC + Gene Expression sequencing to simultaneously profile chromatin accessibility and gene expression of the same individual cell derived from three early human fetal cortex tissues.
DOI: 10.17632/4dxhmkb4gb
title: LINF_110008400

description: 14-3-3 protein-like protein; Leishmania infantum
DOI: 10.17632/6hzvtywynb
title: A tri-functional amino acid enables mapping of binding sites for posttranslational modification-mediated protein-protein interactions

description: This is the raw data of imaging used in the paper "A tri-functional amino acid enables mapping of binding sites for posttranslational modification-mediated protein-protein interactions".
DOI: 10.17632/9vcctz2yp8
title: Diversity of indigenous fruit trees and their role in rural livelihoods in marginal areas of Zimbabwe: case of Chirumanzu, Chivi and Mberengwa districts

description: Ethno-botanical surveys were conducted in Chirumhanzu, Chivi and Mberengwa districts, in April and November 2021, to gather information on the diversity and the role played by IFTs in the socio-economy of inhabitants of these districts. A structured and semi-structured questionnaire were used to gather data from 172 participants identified from 57 villages. The frequency index of each IFT species was calculated and responses from the participants were analyzed. Thirty-seven (37) IFT species from 21 different Genera were identified. Strychnos spinosa, Azanza garckeana and Sclerocarya birrea were the most mentioned indigenous fruit tree species. Approximately 97% of the respondents viewed indigenous fruits as important sources of food and nutrition. Eighty-nine percent considered IFTs as a source of medicine. 95.3% agreed that IFTs had the potential to generate revenue through commerce. 64% of the respondents had received knowledge on domestication and conservation of IFT species mainly from extension officers. However, negative attitudes and lack of quality germplasm hindered their domestication and inclusion of IFTs into their cropping systems. The study showed that more efforts are needed in the propagation, awareness and policy intervention to improve the status of IFTs.
DOI: 10.17632/yc8m5wpykt
title: Physiological changes through an insect ear due to age and noise - a longitudinal study

description: Each file contains the analysed data for each figure along with the code to analyse the dataset to produce the figures in the paper and for statistical analysis. 
We included raw data for figure 1 and 3 only as the file size for the remaining data is ~80 GB.
DOI: 10.17632/23mt4wm5kv
title: original data table of Linking Regeneration Niche to monodominance in biodiverse tropical forest landscapes

description: Geographical coordinates of the occurrence records, monodominant patches and density records of the secondary data and the values of previous forest cover in the landscape (FC-%); mean germination rate (GR-%), mean germination time (GT-days), dominance (%), values of the PCA axis 1 (pca1) and PCA axis 2 (pca2) extracted in each location.
DOI: 10.17632/7fz99tnjmx
title: Data for: A calibration of cellulose isotopes in modern prostrate Nothofagus and its application to fossil material from Antarctica

description: Full isotope dataset
DOI: 10.17632/kkmm72k2n3
title: LINF_100017200

description: nucleoside phosphorylase-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/kzt2x3s273
title: Nutrient-poor meadows in the Trudner Horn Nature Park: Perceptions of different population groups regarding visual cognition, ecosystem services, and management

description: This questionnaire is part of the master thesis "Nutrient-poor meadows in the Trudner Horn Nature Park: Perceptions of different population groups regarding visual cognition, ecosystem services, and management". It was created in spring 2023 and the surveys were conducted in June 2023. The questionnaire was created with Microsoft Forms. The questionnaire consisted of 54 questions in total and was in line with the principles established by national and international regulations, including the Declaration of Helsinki (64th WMA General Assembly, Fortaleza, Brazil, Oct 2013) and the Code of Ethics. The questionnaire is divided into different sections. In the first section, the conditions for participating in the survey are explained to the participant. Section 2 dealt with the visual perception of different landscapes/grasslands of the respondents. For this purpose, different pictures, such as nutrient-poor grasslands and more intensively managed grasslands, were included in the questionnaire. In the following section of the survey (Section 3), first the perception of the importance of ecosystem services in general and then the extent to which these ecosystem services are supply by nutrient-poor grasslands were investigated. The following section (4) focused on the perception of the respondents concerning some agricultural management aspects possibly relevant for the farmers to decide whether to maintain the nutrient-poor meadows through their management. Section 5 dealt with the perception and knowledge of aspects related to the botanical diversity of nutrient-poor meadows. The respondents were asked to indicate on a metric scale how many different plant species they think grow in nutrient-poor grasslands and if they were able to name some of these species. In the last section (7) some questions concerning the age, gender, the residence municipality and the profession of the respondents (non-agricultural profession, grassland farmers, apple and/or wine growers, other professions in agriculture) were asked.
DOI: 10.17632/vnbnfbbxj8
title: Nucleolar stress caused by arginine-rich peptides triggers a ribosomopathy and accelerates aging in mice. Sirozh et al.

description: Raw image files for figures in Molecular Cell manuscript. Western blots.