cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16726895
title: Additional file 1 of Malaria parasite species composition of Plasmodium infections among asymptomatic and symptomatic school-age children in rural and urban areas of Kinshasa, Democratic Republic of Congo

description: Additional file 1: Table S1. Primer sequences and PCR conditions for Plasmodium spp. and Plasmodium genotyping amplification. Table S2. Description of study population. Table S3. Sociodemographic characteristics of asymptomatic school-age children and malaria preventive measures (N = 227). Table S4. Symptoms of outpatient school-age children at admission (N = 207). Table S5a. Association between age and gender with asymptomatic malaria infection in rural and urban areas. Table S5b. Association between age and gender with symptomatic malaria infection in rural and urban areas. Table S6a. Association between age / gender with asymptomatic malaria single and mixed infection in rural and urban areas. Table S6b. Association between age / gender with symptomatic malaria single and mixed infections in rural and urban areas. Table S7. Predictors of asymptomatic malaria infection (bivariate analysis vs multivariate analysis). Note: COR: Crude odds ratio; CI: Confidence interval; AOR: Adjusted odds ratio
DOI: 10.6084/m9.figshare.16726912
title: Additional file 7 of Humans and machines in biomedical knowledge curation: hypertrophic cardiomyopathy molecular mechanisms’ representation

description: Additional file 7. Original Manual HCM model.
DOI: 10.6084/m9.figshare.16726912.v1
title: Additional file 7 of Humans and machines in biomedical knowledge curation: hypertrophic cardiomyopathy molecular mechanisms’ representation

description: Additional file 7. Original Manual HCM model.
DOI: 10.6084/m9.figshare.16726925
title: Additional file 1 of On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples

description: Additional file 1. Screened primer set sequences developed in [16].
DOI: 10.6084/m9.figshare.16726925.v1
title: Additional file 1 of On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples

description: Additional file 1. Screened primer set sequences developed in [16].
DOI: 10.6084/m9.figshare.16726937
title: Additional file 5 of On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples

description: Additional file 5. 3D model of the PCR tubes holder.stl files. A. PCR tube holder.stl file. B. Slider to cover the tubes.stl file. Units are mm.
DOI: 10.6084/m9.figshare.16726937.v1
title: Additional file 5 of On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples

description: Additional file 5. 3D model of the PCR tubes holder.stl files. A. PCR tube holder.stl file. B. Slider to cover the tubes.stl file. Units are mm.
DOI: 10.6084/m9.figshare.16726943.v1
title: Additional file 7 of On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples

description: Additional file 7. On-farm vs. in-lab Hue values. Hue values from the precision cooker experiment on-farm shown in Figure 5 and in-lab shown in Figure 6. For both LAMP experiments and PCR, cells in blue indicate positive samples and cells in white indicate negative samples. Between farm LAMP and PCR, 2 out of 3 LAMP reactions with the same result as PCR was considered agreement.
DOI: 10.6084/m9.figshare.16726943
title: Additional file 7 of On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples

description: Additional file 7. On-farm vs. in-lab Hue values. Hue values from the precision cooker experiment on-farm shown in Figure 5 and in-lab shown in Figure 6. For both LAMP experiments and PCR, cells in blue indicate positive samples and cells in white indicate negative samples. Between farm LAMP and PCR, 2 out of 3 LAMP reactions with the same result as PCR was considered agreement.
DOI: 10.6084/m9.figshare.16726946
title: Additional file 8 of On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples

description: Additional file 8. Limit of detection absorbance values. Limit of detection table showing selection process for primers for each gene target. The numbers indicate the colorimetric absorbance ratio of absorbance measured at 430 nm to 520 nm. Blue cells correspond to colorimetric absorbance ratios higher than 3.0. Missing data indicates conditions that were not tested.
DOI: 10.6084/m9.figshare.16726946.v1
title: Additional file 8 of On-farm colorimetric detection of Pasteurella multocida, Mannheimia haemolytica, and Histophilus somni in crude bovine nasal samples

description: Additional file 8. Limit of detection absorbance values. Limit of detection table showing selection process for primers for each gene target. The numbers indicate the colorimetric absorbance ratio of absorbance measured at 430 nm to 520 nm. Blue cells correspond to colorimetric absorbance ratios higher than 3.0. Missing data indicates conditions that were not tested.
DOI: 10.6084/m9.figshare.16718056.v1
title: transcription anaylsis of Rhodococcus biphenyl TG9 induced by acid stress

description: This data is about the transcription anaylsis of Rhodococcus biphenyl TG9 induced by acid stress.
DOI: 10.6084/m9.figshare.16718056
title: Transcription anaylsis of Rhodococcus biphenylivorans TG9 induced by acid stress

description: This data is about the transcription anaylsis of Rhodococcus biphenyl TG9 induced by acid stress.
DOI: 10.6084/m9.figshare.16718056.v3
title: Transcription anaylsis of Rhodococcus biphenylivorans TG9 induced by acid stress

description: This data is about the transcription anaylsis of Rhodococcus biphenyl TG9 induced by acid stress.
DOI: 10.6084/m9.figshare.16718056.v2
title: transcription anaylsis of Rhodococcus biphenylivorans TG9 induced by acid stress

description: This data is about the transcription anaylsis of Rhodococcus biphenyl TG9 induced by acid stress.
DOI: 10.6084/m9.figshare.16649944
title: Population size, time to extinction and allelic richness data

description: Raw data (Scientific article "Genotype diversity promotes the persistence of Daphnia populations exposed to severe copper stress"):<br>- Sheet 1 "Pop_size" : population size data (both raw and ln-transformed) with info about day , population ID, expected copper concentrations, and food regime<br>- Sheet 2 "Time_to_extinction" : time to extinction data (day)<br><br>- Sheet 3 "Allelic_richness" : raw data of the dynamic of allelic richness through time, population size and expected copper concentrations at sampling days.<br>
DOI: 10.25919/hpfb-xr50
title: Parkes observations for project PX500 semester 2021APRS_25

description: This proposal relates to time purchased by the Chinese Academy of Sciences for Parkes follow-up confirmation and timing of FAST discoveries. As the observing time has been purchased this proposal (and the related PX501) does not require TAC grading. The primary reason for submitting a proposal is to ensure an outreach statement and that the proposal is entered into OPAL for the data archive to access. The Chinese team have two time requests. The time scheduled for the first, relating to this proposal, will be allocated in blocks of 24 hours and the data will become available in the data archive with an 18 month embargo period. The second type of time will be scheduled in shorter blocks and the data archived with a 10 year embargo.
DOI: 10.5066/p9wx8n0l
title: Noble gas isotopes and lumped parameter model results for environmental tracer based groundwater ages, South Rim Grand Canyon, Arizona, USA

description: This data release documents three Microsoft Excel tables; one contains noble gas isotopic data, one contains data for understanding groundwater ages in the South Rim of the Grand Canyon, and one that describe the data fields. Results described include raw noble gas concentrations, environmental tracer concentrations (tritium, tritiogenic helium-3, sulfur hexafluoride, carbon-14, and chlorofluorocarbons), and mean age and age distribution. Noble gas isotopes (NobleGas) contain noble gas isotope concentrations measured for South Rim springs. Samples were collected in pinch clousure copper tubes (Weiss, 1968) and analyzed at the University of Utah Dissolved Gas Lab. Mean age and age distribution results (TracerLPM) contain final models of groundwater age by calibration of lumped parameter models to tracer concentrations (Jurgens and others, 2012). In cases where age was modeled with a binary lumped parameter model (BMM), the mean age was computed from the mean age and fraction of the two components in the mixture. Please see the processing steps below and the main manuscript for additional details on the results presented in this table. Multiple LPMs are provided for a single sample to estimate uncertainty in mean age and age distribution associated with LPM parameter estimates. Jurgens, B.C., Bohlke, J.K., and Eberts, S.M., 2012, TracerLPM (Version 1): An Excel workbook for interpreting groundwater age distributions from environmental tracer data: U.S. Geological Survey Techniques and Methods Report 4-F3, 60 p., https://pubs.usgs.gov/tm/4-f3/.
DOI: 10.5066/f77d2td0
title: Estimated and measured streamflow and groundwater-level data in the Mississippi Delta

description: This data release provides the data that support the findings in "Characterizing groundwater and surface-water interaction using hydrograph-separation techniques and groundwater-level data throughout the Mississippi Delta" by Killian and others (2019). There are two child items below: (1) Estimated baseflow includes the baseflow_est data and metadata that contain daily mean streamflow data provided by the U.S. Geological Survey (USGS) and the U.S. Army Corps of Engineers (USACE), as well as estimated daily mean streamflow records for any missing data and the hydrograph-separation and trends analyses results for the five selected sites output by the USGS Groundwater Toolbox (https://water.usgs.gov/ogw/gwtoolbox/); and (2) Generalized Additive Model includes GAMobs_0410_error data and metadata with the grid node coordinates in North American Datum of 1983 (NAD 83) and results, including error estimates for the Generalized Additive Model (GAM) used to estimate the difference in groundwater altitudes relative to NAD 83 for April 10th of 1980 and April 10th of 2016. The paper associated with the data release quantifies the spatial and temporal changes in baseflow contributions to streamflow and compares changes in baseflow with estimated changes in groundwater altitudes to evaluate the possible impacts of groundwater withdrawals on freshwater resources in the Mississippi Delta.
DOI: 10.5066/p9lzd1v0
title: Testing transmitter types, harness types, and harness materials for attachment of radio transmitters onto avian chicks

description: In an effort to facilitate research into the period between fledging and first breeding of juvenile terns we examined the impact of various combinations of harness types (backpack, leg-loop, and 3D printed harnesses), harness materials (Conrad-Jarvis automotive ribbon, Stretch Magic elastic thread, and Teflon ribbon), and transmitter types (CTT LifeTag and Lotek Nanotag) on a surrogate for juvenile terns, 28 day-old Japanese Quail (Coturnix japonica. This species was selected due to similarities in adult mass and downy feathering of juveniles), in a 30-day experiment. We monitored for abrasion at points of contact and tag gap issues via daily exams while also recording mass and wing cord as indices of growth. This study was designed to serve as an initial examination of the impacts of marking on the growth and development of young birds and does not account for any impacts of tags on movement or behavior. The results of this study are provided in this data release.
DOI: 10.5066/p9s4qv7t
title: Data from SiteOpt: an Open-source R-package for Site Selection and Portfolio Optimization
DOI: 10.5066/p91xt14b
title: Data Files for the Development of Regression Equations for the Estimation of the Magnitude and Frequency of Floods at Rural, Unregulated Gaged and Ungaged Streams in Puerto Rico through Water Year 2017 (ver. 1.1, September 2021)

description: Estimates of the magnitude of peak-flows were updated for the 50-, 20-, 10-, 4-, 2-, 1-, 0.5-, and 0.2-percent chance exceedance levels for 91 rural, unregulated streamgaging stations on the main island of Puerto Rico. These stations required 10 or more years of annual peak-flow record, using data to 2017, for inclusion in the study. The magnitude and frequency of floods at selected streamgages in Puerto Rico were estimated using the U.S. Geological Survey PeakFQ program and updated methods outlined in Bulletin 17C (England and others, 2018). Regional regression equations were calculated to estimate flood frequency statistics at ungaged locations using selected basin characteristics as explanatory variables. These variables were determined from digital spatial datasets and geographic information systems using the most recent data available, as referenced in the U.S. Geological Survey web application, StreamStats, and published in Kolb and Ryan (2021). A generalized least squares procedure in the U.S. Geological Survey program, WREG, was used to account for cross-correlation of sites and develop the final regional regression equations using drainage area as the only explanatory variable. Two separate regions were defined for regression equation use in this study to minimize residuals. References Cited: England J.F., Jr., Cohn, T.A., Faber, B.A., Stedinger,J.R., Thomas,W.O.,Jr., Veilleux,A.G., Kiang,J.E., and Mason,R.R., Jr., 2018, Guidelines for determining flood flow frequency -Bulletin 17C: U.S. Geological Survey Techniques and Methods, book 4, chap. B5, 148p., https://doi.org/10.3133/tm4B5. Kolb, K.R., and Ryan, P.J., 2021, Basin Characteristic Rasters for Puerto Rico StreamStats, 2021: U.S. Geological Survey data release, https://doi.org/10.5066/P9HK9SSQ.
DOI: 10.25919/k235-mm70
title: Parkes observations for project PX500 semester 2021APRS_26

description: This proposal relates to time purchased by the Chinese Academy of Sciences for Parkes follow-up confirmation and timing of FAST discoveries. As the observing time has been purchased this proposal (and the related PX501) does not require TAC grading. The primary reason for submitting a proposal is to ensure an outreach statement and that the proposal is entered into OPAL for the data archive to access. The Chinese team have two time requests. The time scheduled for the first, relating to this proposal, will be allocated in blocks of 24 hours and the data will become available in the data archive with an 18 month embargo period. The second type of time will be scheduled in shorter blocks and the data archived with a 10 year embargo.
DOI: 10.5281/zenodo.5543906
title: Transcriptome sequence of Acer buergerianum Miq.

description: Assembled transcriptome sequence of <em>Acer buergerianum</em> Miq.
DOI: 10.5281/zenodo.5543905
title: Transcriptome sequence of Acer buergerianum Miq.

description: Assembled transcriptome sequence of <em>Acer buergerianum</em> Miq.
DOI: 10.5281/zenodo.5541394
title: Oxide abundances on the lunar surface

description: Abundance and distribution of oxide abundances and Mg# values generated from KAGUYA multiband imager (MI) spectra
DOI: 10.5281/zenodo.5541393
title: Oxide abundances on the lunar surface

description: Abundance and distribution of oxide abundances and Mg# values generated from KAGUYA multiband imager (MI) spectra
DOI: 10.5281/zenodo.5517754
title: Dublin's Corrected Mean Sea Level (1938-2016)

description: This dataset has been created and published to accompany the paper "A newly reconciled data set for identifying sea level rise and variability in Dublin Bay" by Shoari Nejad et al 2021.
DOI: 10.15151/esrf-es-514010985
title: Structural Biology of Macromolecules and Macromolecular complexes from India

description: Structural biology research groups located in India constitute the INDIA-BAG and will utilize MX, SAXS and CryoEM to study different biological macromolecules. Together, these groups address multiple pathways in animals, plants, bacteria and fungi. These studies will provide fundamental mechanistic insight regarding different processes critical for the survival and propagation of the relevant organism. Many groups in the BAG study proteins from pathogens to identify novel intervention points that can be the targeted with small molecule inhibitors to inhibit the growth of the corresponding infectious agents. There are more than 50 groups that are part of this BAG and the allocated beamtime will be available for over 500 young researchers. A brief description of all the research groups is provided in the global summary and a summary of the research contributions involving data collected at ESRF is provided in the last BAG report.
DOI: 10.15151/esrf-es-514140987
title: Structural studies of various proteins in Uppsala and Stockholm

description: The Block Allocation Group (BAG) includes projects for protein structure-based studies at Uppsala University, the Swedish University for Agricultural Sciences (SLU), KTH, Stockholm, and Karolinska Institut, Stockholm under the canopy of Professor Stefan D Knight (UU). A broad range of scientific topics are covered, including but not limited to antibiotics resistance, drug development aiming at new antibiotics, photosynthesis, carbohydrate synthesis and degradation, enzymology, protein evolution, transcription, chromatin remodelling, metal homeostasis, spider silk, and molecular chaperones.
DOI: 10.15151/esrf-es-514137503
title: DCT & 3D-XRD study of strain partitioning in 316L additive manufacturing microstructure during fatigue lifetime

description: With the recent progress in additive manufacturing (AM), the grain shape and crystallographic orientations can be controlled in laser beam melting (LBM). This is an opportunity to optimize the grain texture of materials to fit with higher load specifications. However, grain texture governs the mechanical fields at the grain scale. So, it is primordial to know how these mechanical fields are modified by the novel texture that it is possible to generate thanks to AM. To do that, the evolution of strain partitioning through grains will be studied with 3DXRD method after different number of fatigue cycles. Furthermore, DCT experiments are an opportunity to create numerical clones of 3D 316L microstructures obtained by AM in order to use it in finite element simulations to predict the areas of fatigue crack initiation. The coupling of these two methods is the key to understand the strain partitioning in AM microstructures and its role on fatigue crack initiation.
DOI: 10.6084/m9.figshare.14112968
title: The dataset of walled cities and urban extent in late imperial China in 15th-19th centuries

description: We reconstruct the walled cities for China that extend back from 15th century to 19th century based on multiple historical documents. Cities in late imperial China (the Ming and the Qing Dynasties, 1368-1911) generally had city walls, and these walls were usually built around the urban built-up area. By restoring the scope of the city walls, it is helpful to explore the urban extend in this period Firstly, we collected the years of construction or reconstruction of city walls from the historical data. Specifically, the period in which the scope of the city wall keeps unchanged is recorded as a lifetime of it. Secondly, specialization of the scope of the city wall could be conducted based on the urban morphology method, and variety of documentation, including the historical literature materials, the military topographic maps of the first half of the 20th century, and the remote sensing images of the 1970s. Correlation and integration of the lifetime and the spatial data would produce China City Wall Areas Dataset (CCWAD) in late imperial. Based on the proximity to the time of most of the city walls, we selected six representative years (i.e., 1400, 1537, 1648, 1708, 1787, and 1866) from CCWAD to produce China Urban Extent Dataset (CUED) in the 15th-19th centuries. <br>
DOI: 10.6084/m9.figshare.16546227
title: Demographic Data

description: This data set contain socio-demographic information of participants
DOI: 10.6084/m9.figshare.16546227.v2
title: Demographic Data

description: This data set contain socio-demographic information of participants
DOI: 10.6084/m9.figshare.5281099.v7
title: NBN Speedtest on HFC 50/20(Aug 17),100/40 (May 18) in Hughesdale Vic 3166

description: A speedtest of NBN speeds was run across a weekend, every two hours, from Friday 8.00pm to Monday 8.00am. NBN was running in Hughesdale, 3166 Victoria over Telecube HFC 50/20mbps NBN subscription. The NBN is the Australian National Broadband Network. HFC is the payTV network (a hybrid fibre-coaxial network) and is currently sold at speeds up to 100/40 mbps (download/upload). The test is run on a residential premise with a 50/20mbps subscription with Telecube. Where mbps is megabits per second, and 50/20 is 50mbps download and 20mbps upload.<br>Now includes updated to NBN HFC 100/40 last week. Rerun test. Friday 8.00pm to Monday 8.00am (18-20 May 2018). Using same procedure.<br><br>Speedtest is a network service to test an internet connection speed. See html5 version at http://beta.speedtest.net.<br><br>Speedtest recorded from server: 2225 Telstra Melbourne.List of servers available by running: speedtest-cli --listRecommend: run speedtest against a single server to remove server speed variability. See http://whrl.pl/ReX2rn for server variability impact on speedtest.<br>Version:5. More data on 100/40 upgrade plan. File data200518new.csv added. New plot: Plotly:/50. New jpg. Plot200518.4. More data from 280817 - added every 15mins. File: data280817.csv. New plot: Plotly:/48. New jpg. Plot280817.3. Added play2.csv tidied file including parsed date/time, where DayHr = Day.Hr and DayHr2 = Day.Hr*4 *i.e. close to per cent.2. Out.csv deletes test data.1. Out.csv includes 12 lines of test data from Monash Uni LAN (speeds 200/100mbps). Now deleted in v2..<br>Recording:- upload (mbps)- download (mbps)- ping (milliseconds)and output to a csv file.<br>Code from: Github to run speedtest under python control. https://github.com/sivel/speedtest-cli (linked below).<br>Bash script executes speedtest. (Bash file attached here.)Cron controls automated execution of script and write out data to csv file. (out.csv).Further coding docs included in bash file: job.sh<br>Inspired by: https://forums.cacti.net/viewtopic.php?f=12&t=52732 <br>Cron: 5 */2 * * * cd ~/Downloads/speed/ && ./job.shRuns speedtest every two hours at five minutes past the hour.<br>Environment: MacBook Pro 2012 10.12.6 Python 2.7.10 (MacOS)<br>Data graphed (and data available) at plotly: https://plot.ly/~areff20000/46/ (linked below).<br>
DOI: 10.5517/ccdc.csd.cc23t100
title: CCDC 1960471: Experimental Crystal Structure Determination

description: Related Article: Shuquan Wu, Jun Xu, Rui Deng, Hongling Wang, Yonggui Robin Chi, Pengcheng Zheng|2021|Org.Lett.|23|7513|doi:10.1021/acs.orglett.1c02676
DOI: 10.5517/ccdc.csd.cc2436zg
title: CCDC 1969305: Experimental Crystal Structure Determination

description: Related Article: Shuquan Wu, Jun Xu, Rui Deng, Hongling Wang, Yonggui Robin Chi, Pengcheng Zheng|2021|Org.Lett.|23|7513|doi:10.1021/acs.orglett.1c02676
DOI: 10.5517/ccdc.csd.cc2483q8
title: CCDC 1974009: Experimental Crystal Structure Determination

description: Related Article: Shuquan Wu, Jun Xu, Rui Deng, Hongling Wang, Yonggui Robin Chi, Pengcheng Zheng|2021|Org.Lett.|23|7513|doi:10.1021/acs.orglett.1c02676
DOI: 10.5517/ccdc.csd.cc26qrzp
title: CCDC 2047673: Experimental Crystal Structure Determination

description: Related Article: Jing Liu, Yi Zhou, Jiaqi Zhu, Zhi-Xiang Yu|2021|Org.Lett.|23|7566|doi:10.1021/acs.orglett.1c02766