cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10520247
title: Lemming Mesocosm (Denmark): in-situ fluorescence chlorophyll-a calibration, underlying data

description: These data files include 2 years (2018-2020) of high-frequency in-situ chlorophyll-a and phycocyanin fluorescence sensor (Turner Designs, Cyclops 7F) data, together with data from various tests conducted with these sensors. Morever, in-vitro chlorophyll-a data for 2018-2020 period is also included.

These data are collected in Lemming mesocosm site, Denmark, where there are 24 tanks with 2 nutrient and 3 temperature treatments (2x3 factorial design). There is data from 24 in-situ chlorophyll-a and 12 in-situ phycocyanin fluorescence sensors.

In this Dataset folder, there are:



one Metadata (*.xlsx) file with 3 sheets;



"Descriptive": comprises information on location, authors, study period and the main instrument used, 

"Structural": includes detailed information on each dataset.

"Relational": includes a figure showing the relations between the datasets



thirteen files (*.csv) in LemCP_DataORE that were used to;



conduct in-situ fluorescence sensor tests (i.e. blank variation, linearity check, DOC effect check), 

calibrate 24 in-situ fluorescence chlorophyll-a sensors

plot various figures
DOI: 10.5281/zenodo.10520248
title: Lemming Mesocosm (Denmark): in-situ fluorescence chlorophyll-a calibration, underlying data

description: These data files include 2 years (2018-2020) of high-frequency in-situ chlorophyll-a and phycocyanin fluorescence sensor (Turner Designs, Cyclops 7F) data, together with data from various tests conducted with these sensors. Morever, in-vitro chlorophyll-a data for 2018-2020 period is also included.

These data are collected in Lemming mesocosm site, Denmark, where there are 24 tanks with 2 nutrient and 3 temperature treatments (2x3 factorial design). There is data from 24 in-situ chlorophyll-a and 12 in-situ phycocyanin fluorescence sensors.

In this Dataset folder, there are:



one Metadata (*.xlsx) file with 3 sheets;



"Descriptive": comprises information on location, authors, study period and the main instrument used, 

"Structural": includes detailed information on each dataset.

"Relational": includes a figure showing the relations between the datasets



thirteen files (*.csv) in LemCP_DataORE that were used to;



conduct in-situ fluorescence sensor tests (i.e. blank variation, linearity check, DOC effect check), 

calibrate 24 in-situ fluorescence chlorophyll-a sensors

plot various figures
DOI: 10.15468/dl.r5vhmm
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cicer tragacanthoides Jaub. & Spach"
 ]
}

 The dataset includes 102 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137828-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sefv65
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrobium deltatum Seidenf."
 ]
}

 The dataset includes 4 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022509-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uosoiz
title: Occurrence Download

description: A dataset containing 457 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-180 -90,180 -90,180 -45,-180 -45,-180 -90))",
 "TaxonKey is Psocodea"
 ]
}

 The dataset includes 457 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031654-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z7zkr3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cicerbita gmelinii Beauverd"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137833-230224095556074/datasets/export for details.
DOI: 10.5281/zenodo.10972454
title: Data

description: This dataset contains soil properties data, vegetation traits data, ecosystem carbon exchange in a field water level experiment established at the Yellow River Delta Ecological Experiment Station of the Chinese Academy of Sciences.

We discuss the role of water levels in regulating the threshold of wetland carbon sink function. First, we discuss how changes in water levels affect soil properties and plant growth. In addition, the variation of ecosystem net exchange of carbon dioxide (NEE) with water level and its seasonal variation were identified. Finally, the role of water level in controlling NEE through soil properties and vegetation characteristics was elaborated.

For the process of data collection: An LGR Ultraportable Greenhouse Gas Analyser (UGGA, Los Gatos Research, Inc., San Jose, USA) was used to measure the net ecosystem CO2 exchange (NEE) and ecosystem respiration (Reco). A portable conductivity meter (Milwaukee Model MW301 EC meter) was utilized to calculate the soil temperature (Tsoil) and electric conductivity (EC). Soil was collected for determination of soil organic carbon, total carbon and total nitrogen in the laboratory. During the growing season, we measured the plant height, coverage and density per m2 in the plots when measuring the Reco and NEE.  Aboveground biomass and belowground biomass data of vegetation were collected using the harvesting method.
DOI: 10.15468/dl.qrhdpg
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pelicinus marmoratus Simon, 1892"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004436-150316153013904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a55fvj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Weddell Seal census, Vestfold Hills, Antarctica"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008301-210914110416597/datasets/export for details.
DOI: 10.15468/dl.pdu79y
title: Occurrence Download

description: A dataset containing 12909 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Acacia decurrens Willd.",
 "Year 2010-2023"
 ]
}

 The dataset includes 12909 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137842-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10972563
title: Data and Codes of A Deep Learning-Based Consistency Test for Earth System Models on Heterogeneous Many-Core Systems

description: These are the supporting information to verify the results in the paper, including input data, model outputs, the postprocessing scripts and the source codes.
DOI: 10.15468/dl.aaqwuo
title: Occurrence Download

description: A dataset containing 150 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Podocnemis expansa (Schweigger, 1812)",
 "Geometry POLYGON((-180 -82,-180 82,180 82,180 -82,-180 -82))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 150 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004436-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7bw68
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lactuca nuristanica Kitam."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137843-230224095556074/datasets/export for details.
DOI: 10.5281/zenodo.10467529
title: Data and Codes of A Deep Learning-Based Consistency Test for Earth System Models on Heterogeneous Many-Core Systems

description: These are the supporting information to verify the results in the paper, including input data, model outputs, the postprocessing scripts and the source codes.
DOI: 10.15468/dl.xjy377
title: Occurrence Download

description: A dataset containing 233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Leucogeranus leucogeranus (Pallas, 1773)"
 ]
}

 The dataset includes 233 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008289-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10971058
title: Explorant Oportunitats: Anàlisi d'Ofertes d'Ocupació per a Data Scientists a Europa a través de Glassdoor.

description: L'exploració d'oportunitats professionals per a científics de dades a Europa s'ha realitzat mitjançant l'anàlisi de dades extretes de Glassdoor, una plataforma de recerca d'ocupació. Aquest estudi s'ha centrat en examinar les ofertes d'ocupació disponibles per a aquesta ocupació en el mercat laboral europeu. Mitjançant tècniques d'scraping de dades, s'han recopilat i analitzat detalladament les característiques clau de les ofertes, com ara requisits, ubicacions, salaris i beneficis, proporcionant una visió completa de les tendències i oportunitats per als científics de dades a Europa. Aquesta anàlisi exhaustiva pot ser útil tant per als professionals que busquen noves oportunitats laborals com per a les empreses i institucions interessades en comprendre millor la demanda i les expectatives en aquest camp en creixement.
DOI: 10.15468/dl.xsixaw
title: Occurrence Download

description: A dataset containing 640 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diadasia olivacea (Cresson, 1879)",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-180 -82,-180 82,180 82,180 -82,-180 -82))"
 ]
}

 The dataset includes 640 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004436-150811131857512/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10972606
title: Explorant Oportunitats: Anàlisi d'Ofertes d'Ocupació per a Data Scientists a Europa a través de Glassdoor.

description: L'exploració d'oportunitats professionals per a científics de dades a Europa s'ha realitzat mitjançant l'anàlisi de dades extretes de Glassdoor, una plataforma de recerca d'ocupació. Aquest estudi s'ha centrat en examinar les ofertes d'ocupació disponibles per a aquesta ocupació en el mercat laboral europeu. Mitjançant tècniques d'scraping de dades, s'han recopilat i analitzat detalladament les característiques clau de les ofertes, com ara requisits, ubicacions, salaris i beneficis, proporcionant una visió completa de les tendències i oportunitats per als científics de dades a Europa. Aquesta anàlisi exhaustiva pot ser útil tant per als professionals que busquen noves oportunitats laborals com per a les empreses i institucions interessades en comprendre millor la demanda i les expectatives en aquest camp en creixement.
DOI: 10.15468/dl.zhbqru
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paraprenanthes oligolepis (C.C.Chang ex C.Shih) Ze H.Wang"
 ]
}

 The dataset includes 12 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137844-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10955442
title: Raman spectra from "Discrimination of immune cell activation using Raman micro-spectroscopy in an in-vitro & ex-vivo model"

description: The uploaded files are data from Chaudhary et al, 2021 (Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, Discrimination of immune cell activation using Raman micro-spectroscopy in an in-vitro & ex-vivo model, https://doi.org/10.1016/j.saa.2020.119118).

There are two files in .mat format. In one (Preprocessed.mat) the data has been completely pre-processed according to the methods described in the paper.

In the second (Unpreprocessed.mat) the data has been calibrated using the methods described in the paper, but has not received further pre-processing.

Within both files there are datasets for the spectral measurement from each cell (‘spectra’), together with the treatment which was applied to each sample (‘treatment’) and the wavenumber at which the spectral measurements were made (‘wavenumber’).
DOI: 10.5281/zenodo.10955443
title: Raman spectra from "Discrimination of immune cell activation using Raman micro-spectroscopy in an in-vitro & ex-vivo model"

description: The uploaded files are data from Chaudhary et al, 2021 (Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, Discrimination of immune cell activation using Raman micro-spectroscopy in an in-vitro & ex-vivo model, https://doi.org/10.1016/j.saa.2020.119118).

There are two files in .mat format. In one (Preprocessed.mat) the data has been completely pre-processed according to the methods described in the paper.

In the second (Unpreprocessed.mat) the data has been calibrated using the methods described in the paper, but has not received further pre-processing.

Within both files there are datasets for the spectral measurement from each cell (‘spectra’), together with the treatment which was applied to each sample (‘treatment’) and the wavenumber at which the spectral measurements were made (‘wavenumber’).
DOI: 10.15468/dl.wkftiw
title: Occurrence Download

description: A dataset containing 1465 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Chad",
 "Country is Cameroon",
 "Country is Senegal",
 "Country is Mauritania",
 "Country is Burkina Faso"
 ]
 },
 "TaxonKey is Senegalia senegal (L.) Britton"
 ]
}

 The dataset includes 1465 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007670-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10972453
title: Data

description: This dataset contains soil properties data, vegetation traits data, ecosystem carbon exchange in a field water level experiment established at the Yellow River Delta Ecological Experiment Station of the Chinese Academy of Sciences.

We discuss the role of water levels in regulating the threshold of wetland carbon sink function. First, we discuss how changes in water levels affect soil properties and plant growth. In addition, the variation of ecosystem net exchange of carbon dioxide (NEE) with water level and its seasonal variation were identified. Finally, the role of water level in controlling NEE through soil properties and vegetation characteristics was elaborated.

For the process of data collection: An LGR Ultraportable Greenhouse Gas Analyser (UGGA, Los Gatos Research, Inc., San Jose, USA) was used to measure the net ecosystem CO2 exchange (NEE) and ecosystem respiration (Reco). A portable conductivity meter (Milwaukee Model MW301 EC meter) was utilized to calculate the soil temperature (Tsoil) and electric conductivity (EC). Soil was collected for determination of soil organic carbon, total carbon and total nitrogen in the laboratory. During the growing season, we measured the plant height, coverage and density per m2 in the plots when measuring the Reco and NEE.  Aboveground biomass and belowground biomass data of vegetation were collected using the harvesting method.
DOI: 10.5281/zenodo.10972688
title: Phage production trials with bioractors

description: General protocol for phage production in the DasBox Bioreactor system. Raw data and first results in excel using phage St2 which is a Vibriophage of Myovirus morphotype infecting Vibrio alginolyticus strain V1
DOI: 10.5281/zenodo.10972687
title: Phage production trials with bioractors

description: General protocol for phage production in the DasBox Bioreactor system. Raw data and first results in excel using phage St2 which is a Vibriophage of Myovirus morphotype infecting Vibrio alginolyticus strain V1
DOI: 10.15468/dl.xndy4j
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cicerbita zeravschanica Popov ex Kovalevsk., 1962"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137848-230224095556074/datasets/export for details.
DOI: 10.5281/zenodo.10889613
title: SensoryArt

description: The automatic recognition of sensory gestures in artworks provides the opportunity to open up methods of computational humanities to modern paradigms like sensory studies or everyday history. 

We introduce SensoryArt, a dataset of multisensory gestures in historical artworks, annotated with person boxes, pose estimation key points and gesture labels. 

We analyze algorithms for each label type and explore their combination for gesture recognition without intermediate supervision. These combined algorithms are evaluated for their ability to recognize and localize depicted persons performing sensory gestures. Our experiments show that direct detection of smell gestures is the most effective method for both detecting and localizing gestures. After applying post-processing, this method outperforms even image-level classification algorithms in image-level classification metrics, despite not being the primary training objective. 

This work aims to open up the field of sensory history to the computational humanities and provide humanities-based scholars with a solid foundation to complement their methodological toolbox with quantitative methods.

 

Instruction on how to use the dataset for training and evaluating recognition algorithms can be found on GitHub: https://github.com/mathiaszinnen/SensoryGestureRecognition
DOI: 10.15468/dl.lrubso
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tyrannosaurus rex Osborn, 1905"
 ]
}

 The dataset includes 220 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007671-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wshrim
title: Occurrence Download

description: A dataset containing 73338 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Uruguay"
 ]
}

 The dataset includes 73338 records from 448 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004436-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10924812
title: ATAC-seq raw reads, MACS3 outputs

description: The dataset contains raw reads that were mapped to the nuclear genome and all outputs of MACS3 in 10.5281/zenodo.10972575
DOI: 10.5281/zenodo.10972554
title: ATAC-seq dataset: Chromatin accessibility landscapes activated by cell-surface and intracellular immune receptors

description: The dataset encompasses raw sequencing reads, identified peaks, and regions of differential accessibility derived from ATAC-seq experiments conducted under various immune activation conditions. For additional technical details regarding data collection, please refer to the published source at https://doi.org/10.1093/jxb/erab373.
DOI: 10.5281/zenodo.10877094
title: ATAC-seq raw reads, MACS3 outputs

description: The dataset contains raw reads that were mapped to the nuclear genome and all outputs of MACS3 in 10.5281/zenodo.10972575
DOI: 10.5281/zenodo.10948948
title: Dynamic conformational changes of acid-sensing ion channels in different desensitizing conditions

description: Peer-reviewed manuscript, supplemental file, and source data related to the article 'Dynamic conformational changes of acid-sensing ion channels in different desensitizing conditions'.
DOI: 10.6073/pasta/d12a89673510131582c584b0b08ea136
title: Marcell Experimental Forest 30-minute resolution meteorological data, 2006 - ongoing

description: This data publication contains 30-minute meteorological data collected from 2006 - ongoing at the Marcell Experimental Forest (MEF) in Itasca County, Minnesota, which is operated and maintained by the USDA Forest Service, Northern Research Station. Air temperature, relative humidity, wind speed and direction, photosynthetic photon flux density, soil temperature, and soil volumetric water content were measured at three meteorological monitoring stations. One station is in an upland clearing, one is under an upland forest canopy, and the third is in a peatland.
DOI: 10.15468/dl.h73y4p
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cicerbita auriculiformis (C.Shih) N.Kilian"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137831-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10972575
title: ATAC-seq dataset: Chromatin accessibility landscapes activated by cell-surface and intracellular immune receptors

description: The dataset encompasses raw sequencing reads, identified peaks, and regions of differential accessibility derived from ATAC-seq experiments conducted under various immune activation conditions. For additional technical details regarding data collection, please refer to the published source at https://doi.org/10.1093/jxb/erab373.
DOI: 10.5281/zenodo.10972817
title: Metaverse Gaming Application Addiction

description: Data set for an empirical study on Metaverse Gaming Application Addiction
DOI: 10.15468/dl.vurhgk
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acacia gracilenta Tindale & Kodela"
 ]
}

 The dataset includes 90 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004436-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10948949
title: Dynamic conformational changes of acid-sensing ion channels in different desensitizing conditions

description: Peer-reviewed manuscript, supplemental file, and source data related to the article 'Dynamic conformational changes of acid-sensing ion channels in different desensitizing conditions'.
DOI: 10.5281/zenodo.10972818
title: Metaverse Gaming Application Addiction

description: Data set for an empirical study on Metaverse Gaming Application Addiction
DOI: 10.15468/dl.eszjpm
title: Occurrence Download

description: A dataset listing the 136679 species recorded in GBIF matching the query:
{
 "Country" : [
 "is Costa Rica"
 ]
}

 The dataset's 136679 records were derived from 1554 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017919-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.