cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.636b0/2
title: Transconjugant 16S rRNA gene amplicon profiles

description: 16S rRNA gene amplicon sequencing profiles obtained from the DNA of transconjugant cells who received the GFP (Green Fluorescent Protein) tagged conjugative plasmid pKJK5 via FACS (Fluorescence Activated Cell Sorting)
DOI: 10.5061/dryad.636b0/3
title: RNA-based 16S rRNA gene amplicon profiles part.1

description: 16S rRNA gene amplicon sequencing profiles generated from extracted RNA (cDNA) of wastewater microbiomes. This file is the first part of the RNA-based samples, and contains only the wastewater inlet profiles.
DOI: 10.5061/dryad.636b0/4
title: RNA-based 16S rRNA gene amplicon profiles part.2

description: 16S rRNA gene amplicon sequencing profiles generated from extracted RNA (cDNA) of wastewater microbiomes. This file is the second part of the RNA-based samples, and contains only the wastewater outlet profiles.
DOI: 10.5061/dryad.6qs86/29
title: P04Se03

description: EEG data were recorded from participant 4(session 3). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/30
title: P05Se03

description: EEG data were recorded from participant 5(session 3). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/31
title: P06Se03

description: EEG data were recorded from participant 6(session 3). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/32
title: P07Se03

description: EEG data were recorded from participant 7(session 3). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/33
title: P08Se03

description: EEG data were recorded from participant 8(session 3). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/34
title: P09Se03

description: EEG data were recorded from participant 9(session 3). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/35
title: P10Se03

description: EEG data were recorded from participant 10(session 3). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/36
title: P11Se03

description: EEG data were recorded from participant 11(session 3). For further details, please see the associated README file.
DOI: 10.5061/dryad.75k1d/1
title: van der Meij et al_Biogeosciences2017_data

description: The experimental set-up, treatments, data collection and data analyses are thoroughly described in the Biogeoscience manuscript ‘Remote sensing of plant trait responses to field-based plant-soil feedback using UAV-based optical sensors’ doi:10.5194/bg-2016-452. Therefore we refer to the manuscript for detailed information an here we provide a brief summary to enable readers to follow what the data entail. The data were collected from a 2-year field experiment with plant rotations in a full factorial design. The plant treatments we focused on are legacy effects of the plant treatments (listed below) to the following oat crop. In this oat crop we quantified several plant traits both in situ and via remote sensing by use of UAV and hyperspectral and EGB sensors. The experiment was set-up in five randomized field blocks. We used part of the in situ collected data to parameterize the hyperspectral data based models and we validated these models with the other half of the field plots.
Plant treatments				
Fa= fallow				
Lp= Lolium perenne				
Rs= Raphanus sativus				
Tr= Trifolium repens				
Vs= Vicia sativa				
Lp+Tr= 50:50 species mixture (relative to the monoculture seed densities) of the species Lp and Tr
Rs+Vs= 50:50 species mixture (relative to the monoculture seed densities) of the species Rs and Vs
DOI: 10.5061/dryad.786m4/1
title: collareds_morpho

description: file containing information about the position of the markers (.map file) for flycatchers
DOI: 10.5061/dryad.786m4/2
title: collareds_morpho

description: files contain the genotype data (.ped file) for flycatchers
DOI: 10.5061/dryad.786m4/3
title: meanphenos_flycatchers

description: Phenotype mean values for flycatchers
DOI: 10.5061/dryad.786m4/4
title: RepeatABEL_ses

description: R script for RepeatABEL analyses (repeated phenotype values) for flycatchers
DOI: 10.5061/dryad.786m4/5
title: repeatedmeasuresphenotypes_flycatchers

description: Phenotype values (repeated values) for flycatchers
DOI: 10.5061/dryad.786m4/6
title: Flycatchers GCTA script

description: script for GCTA analyses of Flycatchers
DOI: 10.5061/dryad.8g7h7/6
title: HD .fam
DOI: 10.5061/dryad.8g7h7/7
title: ED .fam
DOI: 10.5061/dryad.8g7h7/8
title: ED .bed
DOI: 10.5061/dryad.8g7h7/9
title: ED .bim
DOI: 10.5061/dryad.8s1qt/1
title: Keith IFS 2yr combined master of arthropod data

description: Master file of raw arthropod data (2yrs)
DOI: 10.5061/dryad.8v212/1
title: Data_Moth_Foraging

description: Data collected to test the effect of lamp type and size classes of moths on foraging: Day = date of the experiment; Block = refers to the block design (block 1 up to 10); Treatment = lamp type (Green, White or Red) or no lamp (Dark); Species = four moth species; Sex = male versus female; unique.id = unique id of every individual, measured over approximately 8 hours; Obs = observation of foraging by moths every six minutes, where 1 = foraging and 0 = not foraging; Size = size classes of moths, where 1 = large (forewing length &lt; 15mm) and 0 = small (forewing length &gt;= 15mm)
DOI: 10.5061/dryad.8v212/2
title: Model_Moth_Foraging

description: R-script for analysis of effects of lamp type and size classes of moths (as fixed factors) on foraging (yes/no) using a generalized linear mixed model
DOI: 10.5061/dryad.b74d0/1
title: Group Size Plotted Points Data

description: Plotted points of the fish and prey locations at the point of attack during group size trials
DOI: 10.5061/dryad.b74d0/2
title: Group Density Plotted Points Data

description: Plotted points of the fish and prey locations at the point of attack during group density trials
DOI: 10.5061/dryad.b74d0/3
title: Group size attack and trial data

description: Data on trials environmental factors and attacks for group size trials
DOI: 10.5061/dryad.b74d0/4
title: Group density attack and trial data

description: Data on trials environmental factors and attacks for group density trials
DOI: 10.5061/dryad.cf137/1
title: Genotype profiles

description: Georeferenced genotypes based on 8 microsatellite markers of 1531 brown bears in Scandinavia
DOI: 10.5061/dryad.cq814/1
title: Characteristics of 201 field-collected egg clutches

description: This file provides for each of 201 field-collected egg clutches the collection date, number of eggs, number of developed and undeveloped embryos, and (for clutches of which embryos were genotyped) two estimates of the number of fathers that sired the clutch, one obtained from using the parentage analysis software COLONY version 2.0.5.9 and one obtained from simple allele counting.
DOI: 10.5061/dryad.cq814/2
title: Shell lengths of 1013 field-collected snails

description: This file provides the collection date and shell length for each of 1013 adult field-collected snails.
DOI: 10.5061/dryad.db827/1
title: JEB-2017-00293_data

description: Data matrix on morphological and ecological traits of 94 species of tropical fruit-feeding butterflies. WTR refers to wing-thorax ratio, calculated as wtr = forewing length²/thorax volume; cf refers to canopy fidelity, estimated from hierarchical Bayesian modeling on butterfly occurrence in canopy or understorey; tv refers to thoracic volume, calculated as tv = thorax length x thorax width²; war refers to wing aspect ratio, calculated as war = 4 x forewing length²/wing area. Traits are separated for males and females.
DOI: 10.5061/dryad.j7d50/1
title: In situ dipteran larva abundances

description: In situ observations of the dipteran larvae inhabiting pitchers of Nepenthes gracilis at three different localities in Singapore
DOI: 10.5061/dryad.j7d50/2
title: Digestion experiments

description: Digestion experiments
DOI: 10.5061/dryad.j7d50/3
title: Interaction experiments

description: Interaction experiments
DOI: 10.5061/dryad.nq8nd/1
title: ML tree of mycetinis Figure2

description: PhyML tree of Mycetinis based on ITS sequences showing relationships within Mycetinis and between Mycetinis and Gymnopus taxa
DOI: 10.5061/dryad.nq8nd/2
title: ML tree of scorodonius_ITS Figure 77

description: Unrooted PhyML tree based on  Mycetinis scorodonius ITS sequences.
DOI: 10.5061/dryad.q713h/1
title: Measurements of seed germination in Arabidopsis lyrata

description: Measurements of germination time and germination success in controlled conditions. Block and place mark the seed position within a plate. Crosstype defines the reciprocal crosses. Group is the ID number of the mother plant. Ripening- and stratdays refer to lengths of the after-ripening and stratification treatments. Germination is the binary representation of whether seed germinated during the experiment (1) or not (0). Germdays is number of days from the start of the experiment until germination.
DOI: 10.5061/dryad.sk497/1
title: Compiled_CommunityData

description: Data of all the compiled years for Figure 2. Meta-data is in the second page of the file.
DOI: 10.5061/dryad.sk497/2
title: 2012_CommunityData

description: Compiled data at the plot level for Figure 3. Meta-data is in the second page.
DOI: 10.5061/dryad.t0r3p/1
title: RSOS_Dryad_Egorov_Figure 1, right panel

description: Mathcad program file validating the results in figure 1
DOI: 10.5061/dryad.t0r3p/2
title: RSOS_Dryad_Egorov_Figure 5, right panel

description: Mathcad program file validating the results in figure 5
DOI: 10.5061/dryad.t0r3p/3
title: RSOS_Dryad_Egorov_Figure 6, left panel

description: Mathcad program file validating the results in figure 6, left panel
DOI: 10.5061/dryad.t0r3p/4
title: RSOS_Dryad_Egorov_Figure 6, right panel

description: Mathcad program file validating the results in figure 6, right panel
DOI: 10.5061/dryad.t84q0/1
title: dataAppendix

description: Gazetteer of specimens corresponding to localities of Eliurus majori employed in this study, providing museum, catalog number, specific locality, altitude (in meters), and latitude and longitude (in decimal degrees). Museum abbreviations are as follows: FMNH: Field Museum of Natural History (Chicago, USA); UADBA: Université d‘Antananarivo, Département de Biologie Animale (Antananarivo, Madagascar). All identifications were verified based on DNA sequences.
DOI: 10.5061/dryad.vv760/1
title: Diet of perch in experiment

description: Stomach content (%) of the perch at the end of the experiment.
DOI: 10.5061/dryad.vv760/2
title: Morphology_Drottningholm_2013_TPS_data

description: TPS file with digitised landmarks for each perch.
DOI: 10.5061/dryad.vv760/3
title: Morphology_Drottningholm_2013_classifiers

description: Classifiers for the TPS morphology file with details of Pond, Treatment and Habitats
DOI: 10.5061/dryad.00715/1
title: SBW_noOG_0.9missing

description: Population genetic analyses input file (5,048 SNPs).
DOI: 10.5061/dryad.18157/1
title: survey_data_5km_1

description: The attached ascII format file contains locations of all detections (1) and negative locations (0) in a 5 km x 5 km grid. All cells with no data are shown with the value -9999
DOI: 10.5061/dryad.2g5r0/1
title: Hirata data

description: Original data on responses of the five subject chimpanzees toward live and video images.
DOI: 10.5061/dryad.30cn0/1
title: nCounter miRNA assay - w1118 1 day Replicate #1

description: NanoString nCounter miRNA assay from Drosophila testes,
Genotype w1118, Age 1 day, Replicate #1
DOI: 10.5061/dryad.30cn0/2
title: nCounter miRNA assay - w1118 1 day Replicate #2

description: NanoString nCounter miRNA assay from Drosophila testes,
Genotype w1118, Age 1 day, Replicate #2
DOI: 10.5061/dryad.30cn0/3
title: nCounter miRNA assay - w1118 15 days Replicate #1

description: NanoString nCounter miRNA assay from Drosophila testes,
Genotype w1118, Age 15 days, Replicate #1
DOI: 10.5061/dryad.30cn0/4
title: nCounter miRNA assay - w1118 15 days Replicate #2

description: NanoString nCounter miRNA assay from Drosophila testes,
Genotype w1118, Age 15 days, Replicate #2
DOI: 10.5061/dryad.30cn0/5
title: nCounter miRNA assay - w1118 30 days Replicate #1

description: NanoString nCounter miRNA assay from Drosophila testes,
Genotype w1118, Age 30 days, Replicate #1
DOI: 10.5061/dryad.30cn0/6
title: nCounter miRNA assay - w1118 30 days Replicate #2

description: NanoString nCounter miRNA assay from Drosophila testes,
Genotype w1118, Age 30 days, Replicate #2
DOI: 10.5061/dryad.30cn0/7
title: RNA-Seq - w1118 1day Replicate #1 Lane 1

description: RNA-Sequencing data from Drosophila testes, Genotype w1118, Age 1 day, Replicate #1, Lane 1
DOI: 10.5061/dryad.30cn0/8
title: RNA-Seq - w1118 1day Replicate #1 Lane 2

description: RNA-Sequencing data from Drosophila testes, Genotype w1118, Age 1 day, Replicate #1, Lane 2
DOI: 10.5061/dryad.30cn0/9
title: RNA-Seq - w1118 1day Replicate #2 Lane 1

description: RNA-Sequencing data from Drosophila testes, Genotype w1118, Age 1 day, Replicate #2, Lane 1
DOI: 10.5061/dryad.35ch4/1
title: Allele report_Hu et al._20170329

description: Allele report of 523 samples of Bulbophyllum bicolor with 12 SSR markers.
DOI: 10.5061/dryad.4c8f8/1
title: Satler&Carstens2017_data

description: Data sets used in Satler and Carstens (2017). Included are allele and SNP files, as well as general information from pyrad analyses.
DOI: 10.5061/dryad.4c8f8/3
title: Satler&Carstens2017_scripts

description: Scripts used to analyze data in Satler and Carstens (2017).
DOI: 10.5061/dryad.6n65q/1
title: OCC_DATA_COVARIATES

description: Contains binary observations of animal detections; and covariates included in the occupancy model
DOI: 10.5061/dryad.6n65q/2
title: Occupancy model code

description: r code file containing occupancy model script
DOI: 10.5061/dryad.6n65q/3
title: Simulation code for power analysis

description: r code used in power analysis
DOI: 10.5061/dryad.6qs86/37
title: P12Se03

description: EEG data were recorded from participant 12(session 3). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/38
title: P02Se04

description: EEG data were recorded from participant 2(session 4). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/39
title: P03Se04

description: EEG data were recorded from participant 3(session 4). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/40
title: P04Se04

description: EEG data were recorded from participant 4(session 4). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/41
title: P05Se04

description: EEG data were recorded from participant 5(session 4). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/42
title: P06Se04

description: EEG data were recorded from participant 6(session 4). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/43
title: P07Se04

description: EEG data were recorded from participant 7(session 4). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/44
title: P08Se04

description: EEG data were recorded from participant 8(session 4). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/45
title: P09Se04

description: EEG data were recorded from participant 9(session 4). For further details, please see the associated README file.
DOI: 10.5061/dryad.6qs86/46
title: P10Se04

description: EEG data were recorded from participant 10(session 4). For further details, please see the associated README file.
DOI: 10.5061/dryad.716hk/1
title: Sex ratio and climate

description: This table describes % females, % of all-female sexuparae, and the total investment of sexuparae in each locality and year. Climatic factors are precipitation in July, August, and September, and mean temperature in  July, August, and September.
DOI: 10.5061/dryad.716hk/2
title: The sex ratio of each autumnal winged female

description: This file shows the numbers of male and female embryos that autumnal winged females of Prociphilus oriens have in their abdomen. The localities and collection years of the females are also shown. The embryos are fully grown, and they sexually mature without taking food after birth.
DOI: 10.5061/dryad.7296h/1
title: Rubalcaba_etal
DOI: 10.5061/dryad.786m4/10
title: h2SE_GenABEL

description: R script for estimating Standard Errors of heritability values from genABEL
DOI: 10.5061/dryad.786m4/11
title: map_Sparrows

description: file containing information about the position of the markers (.map file) for sparrows
DOI: 10.5061/dryad.786m4/12
title: ped_Sparrows.ped

description: files contain the genotype data (.ped) for sparrows
DOI: 10.5061/dryad.786m4/13
title: pheno_mean_Sparrows

description: Phenotype mean values for sparrows
DOI: 10.5061/dryad.786m4/14
title: pheno_rep_Sparrows

description: Phenotype values (repeated values) for sparrows
DOI: 10.5061/dryad.786m4/7
title: Flycatcher GenABEL-RepeatABEL code

description: R script for GenABEL and RepeatABEL analyses of flycatchers
DOI: 10.5061/dryad.786m4/8
title: GCTA script Sparrows

description: Command line script for GCTA analyses (heritability estimates and chromosome partitioning analyses) for sparrows
DOI: 10.5061/dryad.786m4/9
title: GWAS RepeatAbel_Sparrows

description: R script for RepeatABEL analyses (repeated phenotype values) for sparrows
DOI: 10.5061/dryad.7tv64/1
title: moraineA

description: Community data (early stage)
DOI: 10.5061/dryad.887g1/1
title: Photographs for behavioral analyses 1-100724
DOI: 10.5061/dryad.887g1/2
title: Photographs for behavioral analyses 2-100725
DOI: 10.5061/dryad.887g1/3
title: Photographs for behavioral analyses 3-100729
DOI: 10.5061/dryad.887g1/4
title: Photographs for behavioral analyses 4-100730
DOI: 10.5061/dryad.887g1/5
title: Photographs for behavioral analyses 5-100731
DOI: 10.5061/dryad.9mf02/2
title: Gallo_et_al_2017_Ecological_Applications

description: R script, JAGS model, and data used to estimate 𝛾-, 𝛼-, and 𝛽-diversity and community and population dynamics in urban green spaces in the Chicago metropolitan area, IL USA.
DOI: 10.5061/dryad.bb458/1
title: Datasheet_covercrop_root_shoot_label_Austinetal2017_GCBB
DOI: 10.5061/dryad.c15d8/1
title: Data from MacFarlane and Kane 2017 Functional Ecology

description: This data set includes tree, stem and branch data from the MacFarlane and Kane 2017 Functional Ecology paper.  A data dictionary is included in the file to explain the meaning of all the variables.
DOI: 10.5061/dryad.dk4n0/1
title: STAG_2014_2015_MASTERSHEET

description: Data collected in the field in inoculated experiments in 2014 and 2015 at two locations "h" = Hyslop farm; "b" = Botany farm. "Treatment" column is in reference to table 1 of the manuscript. "Total" column is the total number of isolates collected, "Resistant" column is the number of isolates collected that were resistant to fungicide
DOI: 10.5061/dryad.gm187/1
title: Jindal et al. trial_data
DOI: 10.5061/dryad.gm187/2
title: Jindal et al. brood_removal
DOI: 10.5061/dryad.jc8kd/1
title: albums_time_dump.json.tar

description: This dataset contains data that allows for the complete reproducibility of the study. The data is a collection of json records, with the following information: name of the album, list of tags, Last.fm score of each tag, release date of the album.
DOI: 10.5061/dryad.kv3j7/1
title: Lamprey_CYP27C1_qPCR

description: Data from qPCR analysis of Cyp27c1 expression in the retinal pigment epithelia of downstream juvenile and upstream migrant adult Petromyzon marinus.
DOI: 10.5061/dryad.kv3j7/2
title: Figure 2A - rod responses

description: Mean responses of 13 rods to 20-ms 500-nm flashes given at t = 0 at the following intensities (in photons μm−2): 9, 40, 98, 366, 1055, and 2591.
DOI: 10.5061/dryad.kv3j7/3
title: Figure2B - cone responses

description: Mean responses of 6 cones to 20-ms 600-nm flashes given at t = 0 at the following intensities (in photons μm−2): 78, 711, 2051, 5036, 1.91 × 10^4, 2.20 × 10^5, 6.71 × 10^5, and 6.96 × 10^5.
DOI: 10.5061/dryad.kv3j7/4
title: Figure2C - response intensity curves

description: Normalized mean current response amplitudes (± SE) as a function of flash intensity for rods and cones.  Data for both cell types were fitted with the Michaelis-Menton equation, r/rmax = I/(I + I½) where r/rmax is the normalized current amplitude, I is the flash intensity, and I½ is the flash intensity producing a half-maximal response. Best-fitting values of I½ were 52 photons μm−2 for rods and 3210 photons μm−2 for cones.
DOI: 10.5061/dryad.kv3j7/5
title: Figure3A - MSP

description: Microspectrophotometric determinations of mean pigment absorbance (± SE) normalized to absorbance at λmax, taken from 58 juvenile rods.
DOI: 10.5061/dryad.p11b0/1
title: Mouse data

description: Mouse data used in analysis.
DOI: 10.5061/dryad.p1j71/1
title: Python and NLTK-based Source Code

description: The python-based source code deals with development of sentiment analysis system with emphasis on modifiers, emoticons, SWN and others. The read me text file is self explanatory for installation.
DOI: 10.5061/dryad.p5c14/1
title: FE_Zverev-etal_DATA

description: Damage of birch leaves by herbivorous insects.
DOI: 10.5061/dryad.q713h/2
title: Genotypes and phenotypes of QTL mapping family 1
DOI: 10.5061/dryad.q713h/3
title: Genotypes and phenotypes of QTL mapping family 2
DOI: 10.5061/dryad.q713h/4
title: Phenotype_script

description: R commands used to analyze the phenotype data
DOI: 10.5061/dryad.q713h/5
title: QTL_script

description: R/qtl commands used in the QTL analysis
DOI: 10.5061/dryad.r7s04/1
title: macula

description: Patients with and without macula degeneration diagnosis in the time 2011-2014 from general practitioner offices in Germany. Age, gender, diagnoses of depression; anxiety; adjustment disorder; somatoform disorder are included.
DOI: 10.5061/dryad.sk497/3
title: Individual_LevelData

description: Raw species level data for each plot from 2012. Meta-data on second page. Used to make Figure 3c.
DOI: 10.5061/dryad.sq816/1
title: AcornAntThermalTolerance

description: Acorn ant thermal tolerances (upper and lower) from urban and rural sites in Cleveland Ohio USA. Column header descriptions: ColonyID = unique identifier for each ant colony; latitude = decimal degrees latitude for collection site; longitude = decimal degrees longitude for collection site; ISA = percent developed impervious surface of collection site; UR = whether the habitat is considered urban or rural; Individual = unique identifier for each individual; Genus/Species = latin binomial for study organism; Caste = whether the individual is a worker, alate or queen; WhenTol = when the tolerances were assessed, post.cg is post-common garden; Treatment = temperature treatment, daytime_nighttime; DateIn = date put in temperature treatment; DateTol = date thermal tolerance assessed; TrtDays = number of days in the temperature treatment; Tolerance = thermal tolerance estimate; TolType = maximum or minimum tolerance assessed; TolRamp = rate of temperature increase degreesC_per number of minutes
DOI: 10.5061/dryad.t0r3p/5
title: RSOS_Dryad_Egorov_Figure 9, right panel

description: Mathcad program file validating the results in figure 9
DOI: 10.5061/dryad.t0r3p/6
title: RSOS_Dryad_Egorov_Figure 10

description: Mathcad program file validating the results in figure 10
DOI: 10.5061/dryad.t0r3p/7
title: RSOS_Dryad_Egorov_Figure 11

description: Mathcad program file validating the results in figure 11
DOI: 10.5061/dryad.t0r3p/8
title: RSOS_Dryad_Egorov_Figure 12, right panel

description: Mathcad program file validating the results in figure 12
DOI: 10.5061/dryad.ts569/1
title: Ruellia_no_exclusions_OW_pruned taxa

description: Full, aligned DNA matrix
DOI: 10.5061/dryad.vc543/1
title: Table S2. Cichlid parasite data

description: Parasite and host trait data for each cichlid specimen included in the study