cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18407278
title: CheckAMG database

description: Profile HMM databases and their associated cutoff files required to run CheckAMG's annotation module.



CheckAMG_db_v1_20260128.tar.gz: tar archive containing the following



*.hmm, *.h3m, *.h3i, *.h3f, and *.h3p files for each of KEGG, FOAM, Pfam-A, PHROGs, dbCAN, METABOLIC_custom, and CAMPER

KEGG_cutoffs.tsv: score cutoffs for KEGG KOfam HMMs

FOAM_cutoffs.tsv: score cutoffs for FOAM HMMs

CAMPER_cutoffs.tsv: score cutoffs for CAMPER HMMs

README.txt: dependent database versions and citations
DOI: 10.6084/m9.figshare.30901946.v1
title: Supplementary Materials

description: Supplementary methods and dataset
DOI: 10.5281/zenodo.18445210
title: Operando AP-XMCD data: CO oxidation on NiFe2O4 powders
DOI: 10.5281/zenodo.18445209
title: Operando AP-XMCD data: CO oxidation on NiFe2O4 powders
DOI: 10.34740/kaggle/dsv/14691804
title: Berita UNNES
DOI: 10.15468/dl.j9nbgk
title: Occurrence Download

description: A dataset containing 54807 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ligustrum sinense"
 ]
}

 The dataset includes 54807 records from 344 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003713-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18445100
title: SuperDARN data in netCDF format (2009-Sep)

description: 2009-Sep SuperDARN radar data in netCDF format. These files were produced using version 3.0 of the public FitACF algorithm, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication.


The RST is available here: https://github.com/SuperDARN/rst



The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process data and provide access, develop and improve data products, and assist users in interpretation.
Users of SuperDARN data and data products are asked to acknowledge this support in presentations and publications.
A brief statement on how to acknowledge use of SuperDARN data is provided below.




Users are also asked to consult with a SuperDARN PI prior to submission of work intended for publication.
A listing of radars and PIs with contact information can be found here:
(SuperDARN Radar Overview)



Recommended form of acknowledgement for the use of SuperDARN data:



'The authors acknowledge the use of SuperDARN data. SuperDARN is a collection of radars funded by national scientific funding agencies of Australia, Canada, China, France, Italy, Japan, Norway, South Africa, United Kingdom and the United States of America.'
DOI: 10.5281/zenodo.6578268
title: SuperDARN data in netCDF format (2009-Sep)

description: 2009-Sep SuperDARN radar data in netCDF format. These files were produced using version 3.0 of the public FitACF algorithm, using the AACGM v2 coordinate system. Cite this dataset if using our data in a publication.


The RST is available here: https://github.com/SuperDARN/rst



The research enabled by SuperDARN is due to the efforts of teams of scientists and engineers working in many countries to build and operate radars, process data and provide access, develop and improve data products, and assist users in interpretation.
Users of SuperDARN data and data products are asked to acknowledge this support in presentations and publications.
A brief statement on how to acknowledge use of SuperDARN data is provided below.




Users are also asked to consult with a SuperDARN PI prior to submission of work intended for publication.
A listing of radars and PIs with contact information can be found here:
(SuperDARN Radar Overview)



Recommended form of acknowledgement for the use of SuperDARN data:



'The authors acknowledge the use of SuperDARN data. SuperDARN is a collection of radars funded by national scientific funding agencies of Australia, Canada, China, France, Italy, Japan, Norway, South Africa, United Kingdom and the United States of America.'
DOI: 10.34740/kaggle/dsv/14691808
title: Berita UNDIP
DOI: 10.34740/kaggle/dsv/14691831
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.nnhdtf
title: Occurrence Download

description: A dataset containing 5934 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Bulgaria",
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Upupidae",
 "Year 2000-2025"
 ]
}

 The dataset includes 5934 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003720-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ewn4z9
title: Occurrence Download

description: A dataset containing 4037 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Loeselia mexicana"
 ]
}

 The dataset includes 4037 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003722-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6rmd5c
title: Occurrence Download

description: A dataset containing 14257 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Bulgaria",
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Ciconiidae",
 "Year 2000-2025"
 ]
}

 The dataset includes 14257 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003721-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31223059
title: Data "The bat <i>Dermanura watsoni</i> builds thorny tents in an endangered palm"

description: We report <i>Dermanura watsoni</i> roosting in tents in the endangered palm <i>Bactris militaris </i>subsp. <i>militaris</i>. We hypothesize that <i>D. watsoni</i> builds the thorny bifid tents on this palm and are able to remove spines from the midrib to build the roosts, which provides favorable conditions for their establishment and survival.
DOI: 10.6084/m9.figshare.31223059.v1
title: Data "The bat <i>Dermanura watsoni</i> builds thorny tents in an endangered palm"

description: We report <i>Dermanura watsoni</i> roosting in tents in the endangered palm <i>Bactris militaris </i>subsp. <i>militaris</i>. We hypothesize that <i>D. watsoni</i> builds the thorny bifid tents on this palm and are able to remove spines from the midrib to build the roosts, which provides favorable conditions for their establishment and survival.
DOI: 10.15468/dl.mb5r3t
title: Occurrence Download

description: A dataset containing 1750 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Gentianopsis thermalis"
 ]
}

 The dataset includes 1750 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003723-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vgu5dh
title: Occurrence Download

description: A dataset containing 1271 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lupinus montanus"
 ]
}

 The dataset includes 1271 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003724-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/fjdtrry9zs
title: Data for: Effect of non-structural masonry brick infill walls on the robustness of a RC framed building severely damaged due to a landslide
DOI: 10.25387/g3.13146539.v1
title: Supplemental Material for Jones et al., 2020

description: Supplemental Materials
DOI: 10.6084/m9.figshare.15273897.v1
title: Supplementary Material for: Changes in CRP and CA19-9 during Preoperative Oncological Therapy Predict Postoperative Survival in Pancreatic Ductal Adenocarcinoma

description: <b><i>Introduction:</i></b> Tumor and systemic inflammatory markers predict survival. This retrospective study aimed to explore the changes in CRP, CA19-9, and other routine laboratory tests during preoperative oncological therapy as prognostic factors in pancreatic ductal adenocarcinoma (PDAC). <b><i>Methods:</i></b> Between 2000 and 2016, 68 borderline resectable PDAC patients received preoperative oncological therapy and underwent subsequent surgery at Helsinki University Hospital, Finland. We investigated changes in CRP, CA19-9, CEA, albumin, leukocytes, bilirubin, and platelets and examined the impact on survival. <b><i>Results:</i></b> In the multivariate analysis, CRP remaining at ≥3 mg/L after preoperative oncological therapy predicted a poorer postoperative outcome when compared to CRP decreasing to or remaining at &lt;3 mg/L (hazard ratio [HR] 2.766, 95% confidence interval [CI]: 1.300–5.885, <i>p</i> = 0.008). Furthermore, a CA19-9 decrease &gt;90% during preoperative treatment predicted a favorable postoperative outcome (HR 0.297, 95% CI: 0.124–0.708, <i>p</i> = 0.006). In the Kaplan-Meier analysis, the median survival for patients with CRP remaining at &lt;3 mg/L was longer than among patients with an increased CRP level at ≥3 mg/L (42 months vs. 24 months, <i>p</i> = 0.001). Patients with a CA19-9 decrease &gt;90% or level normalization (to ≤37 kU/L) during preoperative treatment exhibited a median survival of 47 months; those with a 50–90% decrease, 15 months; and those with a &lt;50% decrease, 17 months (<i>p</i> &lt; 0.001). <b><i>Conclusions:</i></b> Changes in CRP and CA19-9 during preoperative oncological therapy predict postoperative survival.
DOI: 10.6084/m9.figshare.27569472.v2
title: Genome assembly and annotation of <i>Saccharina japonica</i> female sporophyte

description: <i>Saccharina japonica</i> female sporophyte
DOI: 10.6084/m9.figshare.12854992.v1
title: Public Opinion Towards Gene Drive as a Pest Control Approach for Biodiversity Conservation and the Association of Underlying Worldviews

description: Synthetic gene drive approaches are nascent technologies with potential applicability for pest control for conservation purposes. Responsible science mandates that society be engaged in a dialogue over new technology, particularly where there exist global ramifications as with gene drive. We hypothesize that public attitudes towards gene drive are not formed on scientific knowledge or demographics alone, but are heavily influenced by underlying worldviews, which encapsulate a broad and interactive system of attitudes, beliefs, and values. To test this, we conducted a national survey in New Zealand (<i>n</i> = 8199) and found that respondents clustered into four distinct segments with underlying worldviews, better able to explain attitudes toward gene drive than either the participants' scientific knowledge or other explanatory factors such demographics, political ideology or religiosity. We found that the use of gene drive for biodiversity conservation currently has moderate (32%) levels of support in New Zealand but that varied substantially across the four segments. Should gene drive become a technically viable approach for pest control, understanding the worldviews that shape public decision-making can guide a more empathetic engagement process and empower society to participate in informed decision-making about if and how gene drive should be used for conservation purposes.
DOI: 10.6084/m9.figshare.22637368.v1
title: HG005 Illumina PCR Free

description: HG005 Illumina PCR Free vcf 40x coverage
DOI: 10.6084/m9.figshare.3529178.v1
title: Appendix A. A table showing the general characteristics of the surveyed sites.

description: A table showing the general characteristics of the surveyed sites.
DOI: 10.15468/dl.dyxbra
title: Occurrence Download

description: A dataset containing 2234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Helichrysum petiolare Hilliard & B.L.Burtt)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2234 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013019-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/4398vvvvzj
title: Geospatial Mapping of Sampling Sites in Bali and Banda Aceh Using KML Format

description: The data provides a description of the KML data, showing the sampling site names, their geographic coordinates (longitude, latitude, elevation), and the region (Bali or Banda Aceh).

Name: S01, Coordinates: 115.0906094,-8.837937499999999,0, Region: Bali
Name: S02, Coordinates: 115.0922656,-8.8388875,0, Region: Bali
Name: S03, Coordinates: 115.0940781,-8.8395875,0, Region: Bali
Name: S04, Coordinates: 115.0958594,-8.840412499999999,0, Region: Bali
Name: S05, Coordinates: 115.0966481936237,-8.840546564128275,-0.04716860386552724, Region: Bali
Name: S06, Coordinates: 115.0980621035383,-8.840751272390458,-0.04715956638423391, Region: Bali
Name: S01, Coordinates: 115.1241389,-8.7911944,0, Region: Bali
Name: S02, Coordinates: 115.1237222,-8.791638899999999,0, Region: Bali
Name: S03, Coordinates: 115.123328,-8.792147,0, Region: Bali
Name: S04, Coordinates: 115.12275,-8.7929444,0, Region: Bali
Name: S05, Coordinates: 115.122192,-8.793675,0, Region: Bali
Name: S01, Coordinates: 115.11775,-8.7995833,0, Region: Bali
Name: S01, Coordinates: 115.333392,-8.601433,0, Region: Bali
Name: S02, Coordinates: 115.334525,-8.600968999999999,0, Region: Bali
Name: S03, Coordinates: 115.335467,-8.600574999999999,0, Region: Bali
Name: S04, Coordinates: 115.336561,-8.600047,0, Region: Bali
Name: S05, Coordinates: 115.337536,-8.599582999999999,0, Region: Bali
Name: S06, Coordinates: 115.338375,-8.598908,0, Region: Bali
Name: S01, Coordinates: 95.227739,5.497247,0, Region: Banda Aceh
Name: S02, Coordinates: 95.228678,5.496424999999999,0, Region: Banda Aceh
Name: S03, Coordinates: 95.22987199999999,5.492878,0, Region: Banda Aceh
Name: S04, Coordinates: 95.22849452003169,5.488163859063651,0, Region: Banda Aceh
Name: S05, Coordinates: 95.22641399999999,5.486828,0, Region: Banda Aceh
Name: S01, Coordinates: 95.24567499999998,5.416592,0, Region: Banda Aceh
Name: S02, Coordinates: 95.24615799999999,5.415628,0, Region: Banda Aceh
Name: S03, Coordinates: 95.24676699999999,5.414172,0, Region: Banda Aceh
Name: S04, Coordinates: 95.247119,5.412910999999999,0, Region: Banda Aceh
Name: S05, Coordinates: 95.24783599999999,5.410978,0, Region: Banda Aceh
Name: S06, Coordinates: 95.24834399999999,5.408843999999999,0, Region: Banda Aceh
Name: S01, Coordinates: 95.269858,5.548794,0, Region: Banda Aceh
Name: S02, Coordinates: 95.27111099999999,5.548931,0, Region: Banda Aceh
Name: S03, Coordinates: 95.27319399999999,5.549492,0, Region: Banda Aceh
Name: S04, Coordinates: 95.274519,5.550358,0, Region: Banda Aceh
Name: S05, Coordinates: 95.275278,5.550653,0, Region: Banda Aceh
DOI: 10.17632/4kdp62pshs
title: Establishment of a model for predicting preterm birth based on the machine learning algorithm

description: Background: The purpose of this study was to construct a preterm birth prediction model based on electronic medical records and to provide a reference for preterm birth prediction in the future. 
Methods: This was a cross sectional design. The risk factors for the outcomes of preterm birth were assessed by multifactor logistic regression analysis. In this study, logical regression model, decision tree, Naive Bayes, support vector machine and AdaBoost are used to construct prediction model. Accuracy, recall, precision, F1 value, and receiver operating characteristic curve, were used to evaluate the prediction performance of the model, and the clinical application of the model was verified.
Results: A total of 5411 participants were included and was used for model construction. AdaBoost model has the best prediction ability among the five models. The accuracy of the model for the prediction of “non-preterm birth” was the highest, reaching 100%, and that of “preterm birth” was 72.73%.
Conclusions: By constructing a preterm birth prediction model based on electronic medical records, we believe that machine algorithms have great potential for preterm birth identification. However, more relevant studies are needed before its application in the clinic.
DOI: 10.6084/m9.figshare.23732853.v1
title: Plan de Mejoramiento de Matemáticas para Grado 2do. 2023

description: Plan de Mejoramiento de Matemáticas para Grado 2do. 2023. Fecha: 14 de julio de 2023. Lugar: Institución Educativa Distrital Manuelita Sáenz.
DOI: 10.6084/m9.figshare.6350033.v2
title: Additional file 2: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Table S2. Putative bovine TAD genomic coordinates. This table provides the genomic coordinates of putative bovine TADs. First and second columns (i.e. input TAD cell/tissue type and input TAD reference genome) specify the input bovine TAD set. Third, fourth and fifth columns respectively specify the chromosome number, start and end positions of the putative bovine TADs. (XLSX 495 kb)
DOI: 10.26181/26953450.v1
title: Data File - Psychological Wellbeing and Endometriosis/Adenomyosis

description: <strong>Introduction: </strong>Endometriosis and adenomyosis are chronic health conditions that effect up to 20% of women. Despite their prevalence the average time for diagnosis is 7.5 years which can cause individuals’ significant psychological distress. Currently most research on these conditions focusses on the physical symptoms.
<strong>Aims: </strong>The aim of this research was to understand how living with endometriosis or adenomyosis impacts psychological wellbeing.
<strong>Results: </strong>Survey<strong> </strong>results of 114 participants indicated that more than 90% of participants experienced a lengthy and negative diagnostic process. They also reported feeling high levels of pain consistently, that impaired their daily functioning and was linked to severe levels of psychological distress.
<strong>Conclusions: </strong>This research highlights the serious psychological distress that many people diagnosed with these conditions experience as a result of chronic pain. Furthermore, it highlights the general dismissal of symptoms and the lack of support that individuals feel that they receive during the diagnostic process.
DOI: 10.6084/m9.figshare.20514693.v2
title: Dicom data, MRI Alpine dingo and domestic dog brain

description: Data associated with manuscript: <strong>The Australasian dingo archetype: De novo chromosome-length genome assembly, DNA methylome, and cranial morphology</strong> <br> Raw Dicom data, Alpine Dingo brain (zip) and domestic dog brain (zip). Brains were scanned using high-resolution magnetic resonance imaging (MRI). A Bruker Biospec 94/20 9.4T high field pre-clinical MRI system located at the Biological Resources imaging Laboratory University of New South Wales (UNSW) was used to acquire MRI data of a fixed dingo and domestic dog brain. The system was equipped with microimaging gradients with a maximum gradient strength of 660mT/m and a 72mm Quadrature volume coil. Images were acquired in transverse and coronal orientation using optimized 2D and 3D Fast Spin Echo (FSE) and Gradient Echo (MGE) methods. Image resolution was 200x200x500 and 300x300 microns isotropic for type 3D and 2D pulse sequences, respectively.
DOI: 10.6084/m9.figshare.24434944.v2
title: Data for "Spatio-temporal Forecasting for the US Drought Monitor"

description: This dataset contains the data needed to implement the analysis in the paper "Spatio-temporal Forecasting for the US Drought Monitor" by Robert Erhardt, Staci Hepler, Daniel Wolodkin, and Andy Greene. The code to perform the analysis can be found here. This data contains observations on a 0.5 degree x 0.5 degree grid for the western United State - west of Nevada's eastern border. There is one observation for each grid location for each week beginning January 4, 2000 and ending June 15, 2021. The variables included are described below. <b>Index variables:</b>'time' is YYYYMMDD'grid' is an arbitrary naming convention based on lat/lon. Letters index lat, and numbers index lon. 'lon' is the longitude of the centroid for the grid cell'lat' is the latitude for the centroid for the grid cell<b>USDM variable:</b>'drought' is a factor with levels 0, D0, D1, D2, D3, D4 and refer to the value of the US Drought MOnitor at the particular time and at the grid centroid.<b>NOAA variables:</b>'apcp' is weekly total precipitation in kg/m2'air' is surface air temperature'soilm' is soil moisture<br>
DOI: 10.6084/m9.figshare.25637166.v1
title: NCOMMS-23-56823A_Data_Deposition.zip

description: This is source data of the manuscript entitled "Directional thermal emission and display using pixelated non-imaging micro-optics". <i>Nat Commun</i> <b>15</b>, 4544 (2024). https://doi.org/10.1038/s41467-024-48826-9
DOI: 10.6084/m9.figshare.25974427.v1
title: IS executives and sustainability: Literature review coding outcomes

description: To find relevant literature, we searched the AIS Senior Scholar’s List of Premier Journals and the MIS Quarterly Executive journal. Additionally, we systematically queried the proceedings of the top IS conferences: the International, Asia Pacific, European, and American Conferences on Information Systems (ICIS, PACIS, ECIS, and AMCIS), for which we used AIS eLibrary.In April 2024, we submitted the search string defined in the attached Excel file (sheet 1: <b>Search String</b>).We predefined a specific set of inclusion (IC) and exclusion (EC) criteria:(Inclusion) Articles written in English that were published after 2007(Exclusion) Articles that do not map to any of the seventeen SDGs(Exclusion) Articles that do not target non-IS executives(Exclusion) The research findings do not elucidate the role of or the implications for IS executives(Exclusion) Articles that report on research in progress After these filtering steps, 27 articles remained. Then, for- and backward reference search was conducted to ensure a comprehensive coverage of relevant literature from the predefined sources. The final count of articles is 31. The coding results are available in the attached Excel file:<b>SDG Categorization</b>: Author, type of publication (journal = J, conference = C), article title, publication year, sustainability development goals 1 through 17<b>Descriptive summary</b>: Author, publication type (Journal = J, , Conference = C), Title, publication year, Methodology (CON = Conceptual, MM = Mixed Method, QL = Qualitative, QN = Quantitative", Reference to IS executives (Direct (D), Indirect (I))<b>IMO Framework Mapping</b>: Author, Title, YYYY, Hypothesis, Status, Category, Input:What, SDGOutcome<br>
DOI: 10.6084/m9.figshare.26972467.v3
title: Open inventories of rainfall-triggered landslides, new landslide events

description: New inventories of rainfall event-based landslide data digitized automatically or manually by NASA scientists for either disaster response or for the Cooperative Open Online Landslide Repository (COOLR). The new inventories correspond to 22 different rainfall events from the years 2019-2023.
DOI: 10.6084/m9.figshare.4902917.v1
title: HBDs-AA-SEQUENCE-DATABASE

description: Amino acid sequences occurring in all scaffolds &gt;1,000 in each co-assembly of TARA Oceans metagenomic sets.