cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/jwrdck627d.1
title:  Stata code: Additive and intersectional analyses for self-health concerns during the COVID-19 pandemic in Canada

description: This repository includes two files: 
(1) a secondary data file with an analytical sample, "Rahman_2022_Covid19 AnalyticalSample_StatCanadaData2020" and 
(2) a Stata code file, "Rahman_2022_Covid19_StataCode" .

Rahman (2022) wrote Stata code to analyse a sub-sample (N=239143) of Statistics Canada’s publicly available crowdsourcing data for findings presented in a book chapter. The purpose of this chapter was to showcase the contrast between additive and intersectional approaches to examine the COVID-19 impact on intersectional groups of Canadians. See Rahman's (2022) methods section and Supplemental Figure S1 in order to learn about this analytical sample.

Statistics Canada (2020a) collected crowdsourcing data online from April 3 to 23, 2020 to understand the impacts of the COVID-19 pandemic in Canada. Statistics Canada’s (2020a; 2020b) publicly available complete data set and their documentation can be downloaded from https://doi.org/10.25318/45250003-eng.

REFERENCES

Rahman, Laila. 2022. Concern for self-health during the COVID-19 pandemic in Canada: How to tell an intersectional story using quantitative data? In D. Woolford, D. Kotsopoulos, and B. Samuels (Eds.), Applied Data Science: Data Translators Across the Disciplines, Springer, Interdisciplinary Applied Sciences. (Accepted for publication).

Statistics Canada. (2020a, June 3). Crowdsourcing: Impacts of COVID-19 on Canadians. https://doi.org/10.25318/45250003-eng

Statistics Canada. (2020b). User guide for the crowdsourcing: Impacts of the COVID-19 on Canadians, public use microdata file. https://doi.org/10.25318/45250003-eng
DOI: 10.17632/js8d5by4fw.1
title: LINF_320012700

description: Pan3 pseudokinase domain containing protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/2fp47vg2w9.1
title: Instrumented open-source filament extruder for research and education

description: These components are the machined parts needed to build the structural part of the extruder.
DOI: 10.17632/2fp47vg2w9.2
title: Instrumented open-source filament extruder for research and education

description: These components are the machined parts needed to build the structural part of the extruder.
DOI: 10.17632/2fp47vg2w9.3
title: Instrumented open-source filament extruder for research and education

description: These components are the machined parts needed to build the structural part of the extruder.
DOI: 10.17632/2fp47vg2w9.4
title: Instrumented open-source filament extruder for research and education

description: Extruders are necessary equipment for 3D filament manufacturing, which is considered a clean technology, because it has less scrap and can reuse materials, increasing its life cycle. Open-source extruders are less expensive than industrial extruders. However, they have little instrumentation, which limits the analysis of the processing and, consequently, the development of new materials, screw design and process control. Therefore, this project aims to develop a low-cost extruder with a high degree of instrumentation. To achieve this, equipment with a circuit board was developed, with modularity, machine and peripherals control, process stability, and data acquisition. To validate the equipment, the processing was done at constant temperature and with flow variation. The data obtained were temperatures in different points of the barrel, the rotation speed of the extruder motor, current consumed by the motor and by the resistances, and the speed of the puller motor. Thermal images of the components were taken during processing, validating the type of material used in the parts manufactured by additive manufacturing. The ABS filament produced was analyzed by flow and surface analysis using a confocal microscope.
DOI: 10.17632/2fp47vg2w9.5
title: Instrumented open-source filament extruder for research and education

description: Extruders are necessary equipment for 3D filament manufacturing, which is considered a clean technology, because it has less scrap and can reuse materials, increasing its life cycle. Open-source extruders are less expensive than industrial extruders. However, they have little instrumentation, which limits the analysis of the processing and, consequently, the development of new materials, screw design and process control. Therefore, this project aims to develop a low-cost extruder with a high degree of instrumentation. To achieve this, equipment with a circuit board was developed, with modularity, machine and peripherals control, process stability, and data acquisition. To validate the equipment, the processing was done at constant temperature and with flow variation. The data obtained were temperatures in different points of the barrel, the rotation speed of the extruder motor, current consumed by the motor and by the resistances, and the speed of the puller motor. Thermal images of the components were taken during processing, validating the type of material used in the parts manufactured by additive manufacturing. The ABS filament produced was analyzed by flow and surface analysis using a confocal microscope.
DOI: 10.17632/w5b8vhmbf6.1
title: LINF_320012200

description: U3 small nucleolar ribonucleoprotein protein IMP3
Leishmania infantum (strain JPCM5)
DOI: 10.17632/yjhrxctpw5.1
title: LINF_320012400

description: ubiquitin-conjugating enzyme E2 | UBC8
Leishmania infantum (strain JPCM5)
DOI: 10.17632/b6pnv9tggg.1
title: LINF_320012600

description: U6 snRNA-associated Sm-like protein LSm4p
Leishmania infantum (strain JPCM5)
DOI: 10.17632/z629248f2x.1
title: SI data

description: SI data for Visual cortex encodes timing information in humans and mice
DOI: 10.17632/3z2tr4zjvf.1
title: Raw Data-Manuscript_The deubiquitinase OTUD1 negatively regulates inflammation and plays an immunoregulatory role in sepsis-induced lung injury

description: These additional files are uploaded as the "Raw Data of Original Materials", which we would like to share for review purpose only.

Document List for all the Raw data: 
Raw data 1: 
Demographics and Clinical characterization of patients;
Main clinical indexes and inflammatory biomarkers in sepsis patients.
Raw data 2: 
The Detailed Transcriptomics profile of clinical sepsis patients;
Public array-based profiling of sepsis patients from the GEO database of NCBI: GSE57065; GSE28750; GSE76293.
Raw data 3：
The Detailed Proteomics profile and primary bioinformatics analysis of OTUD1 KO mice.
Raw data 4：
The Detailed Transcriptomics profile and primary bioinformatics analysis of CLP-induced experimental sepsis in OTUD1 KO mice.
Raw data 5：
The original images for HE staining and Transmission electron microscopy；lung injury scores; lung W/D ratio；MPO, SOD and LDH activities；PaO2+PaO2/FiO2 ratio；survival rates.
Raw data 6：
The levels of inflammatory cytokines in the serum of mice (ELISA)：TNF-α, IL-6, IL-1β and HMGB1 levels.
Raw data 7:
The levels of inflammatory cytokines of LPS-stimulated BMDMs (qRT-PCR-1)：TNF‐α, IL-6, IL‐1β and HMGB1 expression levels;
The levels of inflammatory cytokines of LPS-stimulated BMDMs by pretreatment with 5Z-7-ox (qRT-PCR-2)：TNF‐α, IL-6, IL‐1β and HMGB1 expression levels.
Raw data 8
The activation of TAK1-MAPK/NF-κB pathways in LPS-stimulated BMDMs (Western Blot-1)：Expression levels of TAK1, p38, JNK, ERK, p65 as well as their respective phosphorylated proteins;
The activation of TAK1-MAPK/NF-κB pathways in LPS-stimulated BMDMs by pretreatment with 5Z-7-ox (Western Blot-2)：Expression levels of TAK1, p38, JNK, ERK, p65 as well as their respective phosphorylated proteins;
The activation of TAK1-MAPK/NF-κB pathways in lung tissues of mice (Western Blot-3)：Expression levels of TAK1, p38, JNK, ERK, p65 as well as their respective phosphorylated proteins.
DOI: 10.17632/t7b5s58vxt.3
title: Wax worm saliva and the enzymes therein are the key to polyethylene degradation by Galleria mellonella

description: Plastic degradation by biological systems with re-utilization of the by-products can be the future solution to the global threat of plastic waste accumulation. We report that the saliva of Galleria mellonella larvae (wax worms) is capable of oxidizing and depolymerizing polyethylene (PE), one of the most produced and sturdy polyolefin-derived plastics. This effect is achieved after a few hours’ exposure at room temperature and physiological conditions (neutral pH). The wax worm saliva can indeed overcome the bottleneck step in PE biodegradation, that is the initial oxidation step. Within the saliva, we identified two enzymes that can reproduce the same effect. This is the first report of enzymes with this capability, opening up the way to new ground-breaking solutions for plastic waste management through bio-recycling/up-cycling.

This data contains the gene models generated for the reference G. mellonella genome ASM258982v1 in GTF and GFF3 formats
DOI: 10.17632/mbmzpbfxdz.1
title: An optimized Vofi library to initialize the volume fraction field

description: The Vofi (Volume Of Fluid Initializer) library has been developed to initialize the volume fraction field determined by implicitly-defined interfaces. The major conceptual changes in the numerical algorithms of the library are discussed and a few new features, including the computation of the reference phase centroid and of the interface length/area, are presented and applied to grid cells that are cuboids. Several numerical tests are considered to demonstrate both the accuracy of the new features, as the grid resolution and the number of integration points are varied, and the considerably improved efficiency of the library with respect to its previous version. A few of these tests are also included in the software distribution written in C, examples of C++ and Fortran interfaces are also provided.

The previous version of this program (AEYT_v1_0) may be found here https://doi.org/10.1016/j.cpc.2015.10.026.
DOI: 10.17632/jbz2s9xsmv.1
title: MyElas: An automatized tool-kit for high-throughput calculation, post-processing and visualization of elasticity and related properties of solids

description: Elasticity is one of the most fundamental mechanical properties of solid. In high-throughput design of advanced materials, there is an imperative demand for the capability to quickly calculate and screen a massive pool of candidate structures. A fully automatized pipeline with minimal human intervention is the key to provide high efficiency to achieve the goal. Here, we introduce a tool-kit MyElas that aims to address this problem by forging all pre-processing, elastic constant and other related property calculations, and post-processing into an integrated framework that automatically performs the assigned tasks to drive data flowing through parallelized pipelines from input to output. The core of MyElas is to calculate the second and third order elastic constants of a solid with the energy-strain method from first-principles. MyElas can auto-analyze the elastic constants, to derive other related physical quantities. Furthermore, the tool-kit also integrates a visualization function, which can, for example, plot the spatial anisotropy of elastic modulus and sound velocity of monocrystalline. The validity and efficiency of the toolkit are tested and bench-marked on several typical systems.
DOI: 10.17632/t58z289tpc.1
title: BTE-Barna: An extension of almaBTE for thermal simulation of devices based on 2D materials

description: We present BTE-Barna (Boltzmann Transport Equation - Beyond the RTA for NAnosystems), a software package that extends the Monte Carlo (MC) module of the almaBTE solver of the Peierls-Boltzmann transport equation for phonons (PBTE) to work with nanosystems based on 2D materials with complex geometries. To properly capture how the phonon occupations evolve in momentum space as a result of scattering, we have supplemented the relaxation-time approximation with an implementation of the propagator for the full linearized version of the PBTE. The code can now find solutions for finite and extended devices under the effect of a thermal gradient, with isothermal reservoirs or with an arbitrary initial temperature distribution in space and time, writing out the temperature and heat flux distributions as well as their spectral decompositions. Besides the full deviational MC solver, a number of useful approximations for highly symmetric devices are also included.
DOI: 10.17632/sfhhvt9ymx.1
title: Nonlinear equation systems

description: Nonlinear equation systems may be solved by using a modified version of the Levenberg-Marquardt algorithm.
DOI: 10.17632/g53r4hf79x.1
title: Black Bullhead and Potential Predator Data

description: This data includes body dimensions measurement of black bullhead and the length, weight, and gape widths of walleye, largemouth bass, and channel catfish in two South Dakota impoundments.
DOI: 10.17632/5dtkgrnvrj.1
title: LINF_320012800

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/g53r4hf79x.2
title: Black Bullhead and Potential Predator Data

description: This data includes body dimensions measurement of black bullhead and the length, weight, and gape widths of walleye, largemouth bass, and channel catfish in two South Dakota impoundments.
DOI: 10.17632/8tzv35n2bs.1
title: LINF_320013600

description: Repressor of differentiation kinase 1 | RDK1
Leishmania infantum (strain JPCM5)
DOI: 10.17632/4p4ynttfgc.1
title: ISB HEMDAPHRAGMATIC PARESIS

description: Interscalane block was performed under ultrasound guidance. Before and 30 min after the block, an independent observer evaluated ipsilateral hemidiaphragmatic movement on deep inspiration by ultrasonography using a 2-5 MHz broadband curved array transducer. Patients were examined in the semirecumbent position and scanned from a subcostal approach using the liver or spleen as an acoustic window. A < 25% reduction in Diaphragmatic Excursion (DE) was taken as mild paresis. Partial diaphragmatic palsy is diagnosed by a reduction in DE of 25-75% and complete palsy is confirmed by a more than 75% reduction in DE or paradoxical cephalad movement of the diaphragm. [11] 
The sensory blockade was assessed every five min for up to 30 min by the pinprick method in the C5-6 dermatome on a 3-point verbal rating scale: 0 - normal sensation, 1 - dull sensation (analgesia) and 2 - no sensation (anaesthesia). The onset time for a sensory block was defined as the time elapsed between the time of drug administration and the moment when the pinprick test yielded a score of two. Failure to reach a score of two within 30 min of interscalene block was considered to be block failure. General anaesthesia was administered to these patients. But results from these patients were also included in the final analysis based on intention to treat rather than per-protocol basis. [12, 13] The total cases of block failure were noted and the success rate for different groups was compared. The total duration of surgery was documented.
At the end of the surgery, the patient was shifted to the postoperative ward. The Visual Analogue Scale (VAS) was used to assess pain and the patient was explained about the score. The patient was administered paracetamol 1g intravenously (IV) when VAS ≥ 4 and repeated after six hours only when VAS ≥ 4. If the patient has pain even after paracetamol administration, tramadol 100 mg IV was used as a rescue analgesic. The duration of postoperative analgesia was defined as the time taken from the administration of the block to the time of the first request for postoperative analgesia (VAS ≥ 4). [14] The patients were observed for any other side effects like hoarseness of voice, and Horners’ syndrome. The patients were followed up for 24 hours.
DOI: 10.17632/k4k8wzjr47.1
title: LINF_320013300

description: protein kinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/zcs95zy8h9.1
title: LINF_320013100

description: cyclin 9 | CYC9
Leishmania infantum (strain JPCM5)
DOI: 10.17632/2gjym8f3c3.1
title: LINF_320013000

description: RNA binding protein | NRBD1
Leishmania infantum (strain JPCM5)
DOI: 10.17632/2g5r6dy5z8.1
title: Predictive factors for prospective falls and protective effect of group exercising in older adults

description: Dataset of the project: Predictive factors for prospective falls and protective effect of group exercising in older adults
DOI: 10.17632/vdngbzzcpg.1
title: The Prospective of Artificial Neural Network (ANN’s) Model Application to Ameliorate Management of Post Disaster Engineering Projects

description: In this paper, We have studied a post disaster for emergency reconstruction projects. 
The software used is SPSS which provide an optimized method to find the optimum number of nodes in the hidden layer using training process according to the theory of ANN. The set of the input data is processed using assumed model parameters and the results outputs are found and compared with the real output , which then adjust the assumed parameters to minimize the sum of square error, this is the algorithm that the ANN use to adjust the parameters to the best values. 
The data was divided into two sets the training set 20 projects, to build the model (estimating the parameters), then the rest 10 project will used for verification, which proved that the output are reliable.
About the originality of this paper, it was first mentioned in the abstract, besides, it is the first time that we invent an application using both ANN’s and Java script to predict deviation in cost and time before even starting the project.
Findings were clearly shown in results and discussions. 
The used approach in analyzing data was the standard statistics and ANN’s approach that was first time used in such studies in Iraq. 
About the significant points, I shortly briefed that because the focus was on ANN’s first. 
Then these points should be made even clearer; that there is little use of ANN and delay factors, and that our main findings are related to post-emergency construction projects (like the other paper)
DOI: 10.17632/gyz3zrnfrx.1
title: Table S1. Multivariable logistic regression model for receipt of radiotherapy in patients with Merkel cell carcinoma

description: Multivariable logistic regression model for receipt of radiotherapy in patients with Merkel cell carcinoma
DOI: 10.17632/k4kdxsn64h.1
title: WARM-D-22-00524

description: These are supplementary files for the manuscript entitled: A Long-term Global Comparison of IMERG and CFSR with Surface Precipitation Stations.
This paper is submitted in 'Water Resources Management' Journal and under review. Table S2, Table S5 and Table S6 are the Excel files. The rest of the Figures and Tables are available inside the word file namely ‘Supplementary_IMERGpaper’.
DOI: 10.17632/hjf5sctyt8.2
title: MATLAB implementation of an analytical model for the emission of x rays from an x-ray tube

description: An analytical model for the energy and angular distribution of bremsstrahlung and characteristic x rays emitted from an x-ray tube is provided for tungsten and molybdenum targets. The model includes photon mass attenuation coefficients, CSDA ranges, NIST bremsstrahlung cross sections, and bremsstrahlung shape functions extracted from the PENELOPE [v. 2014] materials database. Also included are Monte Carlo-calculated (PENELOPE) electron penetration data, describing the depth, energy, and angular distribution of electrons in thick x-ray targets. The emission of characteristic x rays is taken into account using a previously developed model, which includes Monte Carlo-calculated depth distributions of x-ray fluorescence: http://dx.doi.org/10.17632/mnr2zx92h3.1
DOI: 10.17632/hjf5sctyt8.3
title: MATLAB implementation of an analytical model for the emission of x rays from an x-ray tube

description: An analytical model for the energy and angular distribution of bremsstrahlung and characteristic x rays emitted from an x-ray tube is provided for tungsten and molybdenum targets. The model includes photon mass attenuation coefficients, CSDA ranges, NIST bremsstrahlung cross sections, and bremsstrahlung shape functions extracted from the PENELOPE [v. 2014] materials database. Also included are Monte Carlo-calculated (PENELOPE) electron penetration data, describing the depth, energy, and angular distribution of electrons in thick x-ray targets. The emission of characteristic x rays is taken into account using a previously developed model, which includes Monte Carlo-calculated depth distributions of x-ray fluorescence (see the related link to dataset below).
DOI: 10.17632/hjf5sctyt8.4
title: MATLAB implementation of an analytical model for the emission of x rays from an x-ray tube

description: An analytical model for the energy and angular distribution of bremsstrahlung and characteristic x rays emitted from an x-ray tube is provided for tungsten and molybdenum targets. The model includes photon mass attenuation coefficients, CSDA ranges, NIST bremsstrahlung cross sections, and bremsstrahlung shape functions extracted from the PENELOPE [v. 2014] materials database. Also included are Monte Carlo-calculated (PENELOPE) electron penetration data, describing the depth, energy, and angular distribution of electrons in thick x-ray targets.

The emission of characteristic x rays is taken into account using a previously developed model, which includes Monte Carlo-calculated depth distributions of x-ray fluorescence (see the related link to dataset below).

A Python implementation of the above model has been included in the following toolkit: 
https://bitbucket.org/spekpy/spekpy_release
Some of the key features of this toolkit are also available through a web-based graphical user interface (GUI):
https://spekpy.smile.ki.se/
DOI: 10.17632/753ywvd5yz.1
title: Ca2+ sensor-mediated ROS scavenging suppresses rice immunity and is exploited by a fungal effector

description: This dataset contains all original data for the disease resistance phenotypes in wild-type, rod1, ROD1-OE, rod1 complemented with Ca2+ binding mutants, RIP1 CRISPR mutants, RIP1-OE, APIP6 CRISPR mutants, APIP6-OE, ROD1-SNP, and rod1 complemented with AvrPiz-t. This dataset is related to: https://doi.org/10.1016/j.cell.2021.09.009.
DOI: 10.25574/62803
title: Chandra X-ray Observatory ObsId 62803
DOI: 10.25574/62807
title: Chandra X-ray Observatory ObsId 62807
DOI: 10.25574/62808
title: Chandra X-ray Observatory ObsId 62808
DOI: 10.25574/62809
title: Chandra X-ray Observatory ObsId 62809
DOI: 10.25574/62810
title: Chandra X-ray Observatory ObsId 62810
DOI: 10.25574/62811
title: Chandra X-ray Observatory ObsId 62811
DOI: 10.25574/62812
title: Chandra X-ray Observatory ObsId 62812
DOI: 10.25574/62813
title: Chandra X-ray Observatory ObsId 62813
DOI: 10.25574/62814
title: Chandra X-ray Observatory ObsId 62814
DOI: 10.25574/62815
title: Chandra X-ray Observatory ObsId 62815
DOI: 10.25574/62816
title: Chandra X-ray Observatory ObsId 62816
DOI: 10.25574/62817
title: Chandra X-ray Observatory ObsId 62817
DOI: 10.25574/62819
title: Chandra X-ray Observatory ObsId 62819
DOI: 10.25574/62820
title: Chandra X-ray Observatory ObsId 62820
DOI: 10.25574/62821
title: Chandra X-ray Observatory ObsId 62821
DOI: 10.25574/62822
title: Chandra X-ray Observatory ObsId 62822
DOI: 10.25574/62823
title: Chandra X-ray Observatory ObsId 62823
DOI: 10.25574/62824
title: Chandra X-ray Observatory ObsId 62824
DOI: 10.25574/62825
title: Chandra X-ray Observatory ObsId 62825