cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16619773.v18
title: Data from "Notch-dependent and -independent transcription are modulated by tissue movements at gastrulation"

description: Data from "Levels of Notch-regulated transcription are modulated by tissue movements at gastrulation":<br>- raw MS2 Live imaging movies: 124 '.lif' files captured in a Leica SP8 confocal. Each is a 1-2h movie of a developing fly embryo in the genetic condition described in the file name. The metadata file contains the information linking each movie with parameters used for image analysis and identifier of the genetic condition ("nickname" column).<br>- data obtained from image analysis: '.mat' files obtained from MATLAB after image analysis for each movie. README contains information of the data structure and all variables stored in each.<br>- numerical data used for figures: text files containing data points used in all figures in the paper. "NumericalData.txt" contains the information about each plot, axes, figure where it's used and name of the file containing the numerical data.
DOI: 10.6084/m9.figshare.19690495
title: SVM models

description: FOR PUBLICATION
DOI: 10.34740/kaggle/dsv/3562994
title: Polish-Ukrainian translations from Tatoeba
DOI: 10.15151/esrf-es-752395653
title: Operando X-ray absorption spectroscopy to understand the switching mechanisms in Pt/La2NiO4/TiN memristors for neuromorphic computing

description: Rising interest for beyond von-Neumann logics has led to the development of artificial synapses for neuromorphic computation using memristors as functional elements. Due to their adjustable resistance, the modulated synaptic weight of bio-synapse can be performed, making them suitable for learning and memory functions. In the last few years, special attention has been drawn to the use of perovskites (such as manganites or nickelates) as memristive layer due to their tunable ionic and electronic transport properties.In this context the main objectives of this proposal are to: 1) experimentally measure chemical changes related to the resistive switching (RS) behaviour of Pt/La2NiO4+δ/TiN memristors with different oxygen content and thickness, and 2) temporarily observe the chemical changes in each of the layers related to cycling, potentiation, depression and relaxation functions by operando XANES /electrical measurements.
DOI: 10.23729/c5ff9623-d162-46d8-83f5-690af0967843
title: 3D Library Set 2

description: Second set of structures for the GTK 3D structure library, intended to act as a database for geoinspired design projects. Samples are scanned only to add their structure to the library, with no other direct research interest. Preview dataset found at https://doi.org/10.23729/d12cdcc0-8cae-43b2-b6f9-0b5b69bf3a1d . To obtain data, please contact fairdata-pas@gtk.fi .
DOI: 10.5281/zenodo.6510722
title: Computational dataset for the manuscript "Tethered agonist exposure in intact adhesion/class B2 GPCRs through intrinsic structural flexibility of the GAIN domain"

description: This repository provides url links to the MDsrv sessions for the manuscript: <em>Tethered agonist exposure in intact adhesion/class B2 GPCRs through intrinsic structural flexibility of the GAIN domain<strong>.</strong></em> <strong>Link 1</strong>: L1 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1.ngl <strong>Link 2</strong>: G1 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/G1.ngl <strong>Link 3</strong>: E5 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5_crevice.ngl <strong>Link 4: </strong>E5 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5.ngl <strong>Link 5: </strong>E5 +3 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5+3.ngl <strong>Link 6: </strong>E5 +6 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5+6.ngl <strong>Link 7: </strong>E2 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E2.ngl <strong>Link 8: </strong>L1 Phe+3Lys dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Phe+3Lys.ngl <strong>Link 9: </strong>L1 Leu+6Lys dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Leu+6Lys.ngl <strong>Link 10: </strong>L1 dynamic (ribbon representation): proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Ribbon.ngl
DOI: 10.34740/kaggle/dsv/3563095
title: Bangla Newspaper Dataset - ebD
DOI: 10.6084/m9.figshare.16619773.v19
title: Data from "Notch-dependent and -independent transcription are modulated by tissue movements at gastrulation"

description: Data from "Levels of Notch-regulated transcription are modulated by tissue movements at gastrulation":<br>- raw MS2 Live imaging movies: 124 '.lif' files captured in a Leica SP8 confocal. Each is a 1-2h movie of a developing fly embryo in the genetic condition described in the file name. The metadata file contains the information linking each movie with parameters used for image analysis and identifier of the genetic condition ("nickname" column).<br>- data obtained from image analysis: '.mat' files obtained from MATLAB after image analysis for each movie. README contains information of the data structure and all variables stored in each.<br>- numerical data used for figures: text files containing data points used in all figures in the paper. "NumericalData.txt" contains the information about each plot, axes, figure where it's used and name of the file containing the numerical data.
DOI: 10.5281/zenodo.6510766
title: Computational dataset for the manuscript "Tethered agonist exposure in intact adhesion/class B2 GPCRs through intrinsic structural flexibility of the GAIN domain"

description: This repository provides url links to the MDsrv sessions for the manuscript: <em>Tethered agonist exposure in intact adhesion/class B2 GPCRs through intrinsic structural flexibility of the GAIN domain<strong>.</strong></em> <strong>Link 1</strong>: L1 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1.ngl <strong>Link 2</strong>: G1 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/G1.ngl <strong>Link 3</strong>: E5 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5_crevice.ngl <strong>Link 4: </strong>E5 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5.ngl <strong>Link 5: </strong>E5 +3 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5+3.ngl <strong>Link 6: </strong>E5 +6 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5+6.ngl <strong>Link 7: </strong>E2 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E2.ngl <strong>Link 8: </strong>L1 Phe+3Lys dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Phe+3Lys.ngl <strong>Link 9: </strong>L1 Leu+6Lys dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Leu+6Lys.ngl <strong>Link 10: </strong>L1 dynamic (ribbon representation): proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Ribbon.ngl
DOI: 10.5281/zenodo.3238198
title: Computational dataset for the manuscript "Tethered agonist exposure in intact adhesion/class B2 GPCRs through intrinsic structural flexibility of the GAIN domain"

description: This repository provides url links to the MDsrv sessions for the manuscript: <em>Tethered agonist exposure in intact adhesion/class B2 GPCRs through intrinsic structural flexibility of the GAIN domain<strong>.</strong></em> <strong>Link 1</strong>: L1 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1.ngl <strong>Link 2</strong>: G1 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/G1.ngl <strong>Link 3</strong>: E5 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5_crevice.ngl <strong>Link 4: </strong>E5 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5.ngl <strong>Link 5: </strong>E5 +3 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5+3.ngl <strong>Link 6: </strong>E5 +6 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5+6.ngl <strong>Link 7: </strong>E2 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E2.ngl <strong>Link 8: </strong>L1 Phe+3Lys dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Phe+3Lys.ngl <strong>Link 9: </strong>L1 Leu+6Lys dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Leu+6Lys.ngl <strong>Link 10: </strong>L1 dynamic (ribbon representation): proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Ribbon.ngl
DOI: 10.6084/m9.figshare.19690591
title: Data for the paper of Concurrent Precipitation Extremes Modulate the Response of Rice Transplanting Date to Preseason Temperature Extremes in China

description: Data for the paper of Concurrent Precipitation Extremes Modulate the Response of Rice Transplanting Date to Preseason Temperature Extremes in China.
DOI: 10.6084/m9.figshare.19690591.v1
title: Data for the paper of Concurrent Precipitation Extremes Modulate the Response of Rice Transplanting Date to Preseason Temperature Extremes in China

description: Data for the paper of Concurrent Precipitation Extremes Modulate the Response of Rice Transplanting Date to Preseason Temperature Extremes in China.
DOI: 10.5281/zenodo.4114651
title: Computational dataset for the manuscript "Tethered agonist exposure in intact adhesion/class B2 GPCRs through intrinsic structural flexibility of the GAIN domain"

description: This repository provides url links to the MDsrv sessions for the manuscript: <em>Tethered agonist exposure in intact adhesion/class B2 GPCRs through intrinsic structural flexibility of the GAIN domain<strong>.</strong></em> <strong>Link 1</strong>: L1 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1.ngl <strong>Link 2</strong>: G1 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/G1.ngl <strong>Link 3</strong>: E5 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5_crevice.ngl <strong>Link 4: </strong>E5 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5.ngl <strong>Link 5: </strong>E5 +3 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5+3.ngl <strong>Link 6: </strong>E5 +6 static: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E5+6.ngl <strong>Link 7: </strong>E2 dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/E2.ngl <strong>Link 8: </strong>L1 Phe+3Lys dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Phe+3Lys.ngl <strong>Link 9: </strong>L1 Leu+6Lys dynamic: proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Leu+6Lys.ngl <strong>Link 10: </strong>L1 dynamic (ribbon representation): proteinformatics.uni-leipzig.de/html/mdsrv.html?load=file://base/aGPCRs/L1Ribbon.ngl
DOI: 10.7910/dvn/zads6q
title: Replication Data for: Accountability and Corruption Displacement: Evidence from Italy

description: One of the reasons for which corruption is so difficult to eradicate is because the actors involved are skilled in adapting their behaviour to changing institutional landscapes. However, surprisingly little is known about how corruption displacement functions across multiple levels of government. Using novel multilevel data on a political scandal in Italy and a Difference-in-Differences estimation strategy, I provide within-country evidence that a sudden increase in accountability for national deputies can impact negatively upon the behaviour of local-level public officials and politicians. In treated districts, where there is an increase in the indictment rate of national deputies, local level corruption increases significantly as compared to non-treated districts. My results show how, in contexts characterised by systemic corruption, changes intended to enhance accountability can trigger a series of mechanisms within the political machine that exploit different levels of government.
DOI: 10.6084/m9.figshare.18286232
title: adjacency matrix

description: A product adjacency matrix for all products available in the donkey skin product network
DOI: 10.6084/m9.figshare.18286232.v2
title: adjacency matrix

description: A product adjacency matrix for all products available in the donkey skin product network
DOI: 10.6084/m9.figshare.18286232.v1
title: adjacency matrix

description: A product adjacency matrix for all products available in the donkey skin product network
DOI: 10.6084/m9.figshare.15190011.v3
title: How do second language learners process Russian verbal morphology?

description: These datasets include reaction times from a masked priming study. The goal of the study is to study processing of Russian verbal morphology in L1 and L2 participants. There were 80 participants in total, 57 second language learners and 23 Russian native speakers. <br>
DOI: 10.6084/m9.figshare.19690603.v1
title: Codes and files

description: The repository consist of .ipynb files, excel files as test data and a metadata file with the instructions how to run the code(s).
DOI: 10.6084/m9.figshare.19690603
title: Codes and files

description: The repository consist of .ipynb files, excel files as test data and a metadata file with the instructions how to run the code(s).
DOI: 10.6084/m9.figshare.13685839.v1
title: Carbon Monitor: Global daily CO2 emissions from fossil fuel combustion and cement production 2020

description: <i>Carbon Monitor is a near real-time dataset for daily CO2 emissions with global coverage from 6 main sectors (power, industry, ground transportation, aviation, residential and international shipping).</i><br><i>Here, we provide the whole year data of 2019 and 2020.<br>Visit our website for more information: <i>https://carbonmonitor.org</i></i>
DOI: 10.6084/m9.figshare.19690618
title: Supplementary Material for: <b><i>Staphylococcus aureus</i></b> Activates the Aryl Hydrocarbon Receptor in Human Keratinocytes

description: <i>Staphylococcus aureus</i> is an important pathogen causing various infections, including – as most frequently isolated bacterium – cutaneous infections. Keratinocytes as the first barrier cells of the skin respond to <i>S. aureus</i> by the release of defense molecules such as cytokines and antimicrobial peptides. Although several pattern recognition receptors expressed in keratinocytes such as Toll-like and NOD-like receptors have been reported to detect the presence of <i>S. aureus</i>, the mechanisms underlying the interplay between <i>S. aureus</i> and keratinocytes are still emerging. Here, we report that <i>S. aureus</i> induced gene expression of CYP1A1 and CYP1B1, responsive genes of the aryl hydrocarbon receptor (AhR). AhR activation by <i>S. aureus</i> was further confirmed by AhR gene reporter assays. AhR activation was mediated by factor(s) &lt;2 kDa secreted by <i>S. aureus</i>. Whole transcriptome analyses and real-time PCR analyses identified IL-24, IL-6, and IL-1beta as cytokines induced in an AhR-dependent manner in <i>S. aureus</i>-treated keratinocytes. AhR inhibition in a 3D organotypic skin equivalent confirmed the crucial role of the AhR in mediating the induction of IL-24, IL-6, and IL-1beta upon stimulation with living <i>S. aureus</i>. Taken together, we further highlight the important role of the AhR in cutaneous innate defense and identified the AhR as a novel receptor mediating the sensing of the important skin pathogen <i>S. aureus</i> in keratinocytes.
DOI: 10.5281/zenodo.6509836
title: Data to reproduce the results presented in Sehgal et al. 2022. Water Resources Research, https://doi.org/10.1029/2021WR030624 ("Inferring suspended sediment carbon content and particle size at high-frequency from the optical response of a submerged spectrometer")

description: This repository consists data to reproduce results as presented in: "Inferring suspended sediment carbon content and particle size at high-frequency from the optical response of a submerged spectrometer", Water Resorces Research. Kindly refer to the readme.text file to navigate through the dataset.
description: The research was funded by the Luxembourg National Research Fund(FNR) (PRIDE15/10623093/HYDRO‐CSI).
description: {"references": ["Sehgal, D., Mart\u00ednez\u2010Carreras, N., Hissler, C., Bense, V. F., & Hoitink, A. J. F. (Ton). (2022). Inferring suspended sediment carbon content and particle size at high frequency from the optical response of a submerged spectrometer. Water Resources Research, 58, e2021WR030624. https://doi.org/10.1029/2021WR030624"]}
DOI: 10.6084/m9.figshare.15190011.v4
title: How do second language learners process Russian verbal morphology?

description: These datasets include reaction times from a masked priming study. The goal of the study is to study processing of Russian verbal morphology in L1 and L2 participants. There were 80 participants in total, 57 second language learners and 23 Russian native speakers. <br>
DOI: 10.14457/tu.the.2020.1273
title: A study of students' perceptions toward cooperative learning in English language classrooms

description: This study is entitled “A Study of Students' Perceptions toward Cooperative Learning in English Language Classrooms”. The purposes of this study were to examine the perception of students in SMTE and Regular Program Program toward Cooperative Learning for studying in an English language classroom and to compare the difference of perception toward Cooperative Learning for studying in an English language classroom between students in SMTE Program and students in Regular Program. The participants of this study were students in Mattayom 2 in the second semester of academic year 2020 at a public school in Nakhon Ratchasima province. They were selected by using purposive sampling method for the reason that in one classroom was SMTE Program (30 students) and in the other classroom was Regular Program (30 students), the total participants were 60. The instruments used in this study were a questionnaire to investigate the perception of students in SMTE and Regular Program toward Cooperative Learning in their English Language Classroom launched three periods per week. They were taught with the same content over seventeen weeks for 50 minutes per period. The data was analyzed by using mean, standard deviation (SD), percentage and t-test. The open – ended questions were analyzed based on the themes of the answers from the students. Cooperative Learning is very advantageous and profitable to students in the English subject, according to the findings of the study. The study demonstrated students' positive attitudes toward Cooperative Learning and their satisfaction with this technique for teaching and studying English in Thai secondary schools.
DOI: 10.5281/zenodo.6510855
title: Gold and Bitcoin Prices

description: 这些数据来自数学建模竞赛,描述了2016年至2021年黄金和比特币的价格。
DOI: 10.6084/m9.figshare.19690639
title: mizuRoute_global_ancillary_data

description: Ancillary data to run mizuRoute in global setting
DOI: 10.6084/m9.figshare.19690657
title: settings_mizuRoute_global

description: Settings to run mizuRoute in global domain
DOI: 10.6084/m9.figshare.19690657.v2
title: settings_mizuRoute_global

description: Settings to run mizuRoute in global domain
DOI: 10.6084/m9.figshare.19690657.v1
title: settings_mizuRoute_global

description: Settings to run mizuRoute in global domain
DOI: 10.34740/kaggle/dsv/3563428
title: AutoXGB
DOI: 10.34740/kaggle/dsv/3563424
title: Health Workforce Shortage Areas
DOI: 10.5281/zenodo.6510948
title: Metrics for continuous delivery: a rapid review

description: This is a replication package as part of the paper submitted for ESEM'22 (ACM / IEEE International<br> Symposium on Empirical Software Engineering and Measurement (ESEM)
DOI: 10.5281/zenodo.6505233
title: Metrics for continuous delivery: a rapid review

description: This is a replication package as part of the paper submitted for ESEM'22 (ACM / IEEE International<br> Symposium on Empirical Software Engineering and Measurement (ESEM)
DOI: 10.5281/zenodo.5840377
title: Supplementary material for "Spatio-temporal modelling of abundance from multiple data sources in an integrated spatial distribution model"

description: <strong>Abstract</strong> <strong>Aim:</strong> In biodiversity monitoring, observational data are often collected in multiple, disparate schemes with greatly varying degrees of standardization and possibly at different spatial and temporal scales. Technical advances also change the type of data over time. The resulting heterogeneous data sets are often deemed to be incompatible. Consequently, many available data sets may be ignored in practical analyses. Here, we propose a more efficient use of disparate biodiversity data to assess species distributions and population trends.<br> <br> <strong>Location:</strong> Switzerland (Europe)<br> <br> <strong>Taxon:</strong> Birds <strong>Methods: </strong>We developed an integrated, hierarchical species distribution model with a joint likelihood for all data sets using a shared state process (e.g., latent species abundance or occurrence), but distinct observation process for each data set. We show how the abundance submodel of a binomial N-mixture model can fuse four different data types (count, detection/non-detection, presence-only, and absence-only data) and enable improved inferences about spatio-temporal patterns in abundance. As case studies, we use data from multiple avian biodiversity monitoring schemes. In the first, the goal is estimating abundance-based species distribution maps. In the second, we infer trends in population abundance across time. <strong>Results: </strong>Accuracy and precision of abundance estimates increased when combining data from different sources compared to using a single data source alone. This is particularly valuable when data from each single data source is too sparse for reliable parameter estimation.<br> Main conclusions: We show that exploiting the complementary nature of "cheap", but abundant, citizen-science data and less abundant, but more information-rich, data from structured monitoring programs might be ideal to estimate distribution and population trends more accurately, especially for rare species. Joint likelihoods allow to include a wide variety of different data sets to (1) combine all the available information and to (2) mitigate weaknesses of one by the strength of another.