cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10790747
title: Data from: Genome-wide Polygenic Risk Scores Predict Risk of Glioma and Molecular Subtypes

description: Background: Polygenic risk scores (PRS) aggregate the contribution of many risk variants to provide a personalized genetic susceptibility profile. Since sample sizes of glioma genome-wide association studies (GWAS) remain modest, there is a need to efficiently capture genetic risk using available data.

Methods: We applied a method based on continuous shrinkage priors (PRS-CS) to model the joint effects of over 1 million common variants on disease risk and compared this to an approach (PRS-CT) that only selects a limited set of independent variants that reach genome-wide significance (P<5×10-8). PRS models were trained using GWAS stratified by histological (10,346 cases, 14,687 controls) and molecular subtype (2,632 cases, 2,445 controls), and validated in two independent cohorts.

Results: PRS-CS was generally more predictive than PRS-CT with a median increase in explained variance (R2) of 24% (interquartile range=11-30%) across glioma subtypes. Improvements were pronounced for glioblastoma (GBM), with PRS-CS yielding larger odds ratios (OR) per standard deviation (OR=1.93, P=2.0×10-54 vs. OR=1.83, P=9.4×10-50) and higher explained variance (R2=2.82% vs. R2=2.56%). Individuals in the 80th percentile of the PRS- CS distribution had significantly higher risk of GBM (0.107%) at age 60 compared to those with average PRS (0.046%, P=2.4×10-12). Lifetime absolute risk reached 1.18% for glioma and 0.76% for IDH wildtype tumors for individuals in the 95th PRS percentile. PRS-CS augmented the classification of IDH mutation status in cases when added to demographic factors (AUC=0.839 vs. AUC=0.895, P=6.8×10-9).

Conclusions: Genome-wide PRS has potential to enhance the detection of high-risk individuals and help distinguish between prognostic glioma subtypes.

Citation: Nakase T, Guerra GA, Ostrom QT, et al. Genome-wide Polygenic Risk Scores Predict Risk of Glioma and Molecular Subtypes. Neuro-Oncology. Published online June 25, 2024:noae112. doi:10.1093/neuonc/noae112
DOI: 10.5281/zenodo.10903093
title: Performance Variation Across Multi-Factor Environments (vp9)
DOI: 10.5281/zenodo.10903094
title: Performance Variation Across Multi-Factor Environments (vp9)
DOI: 10.15468/dl.pgb8qx
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Lophostoma occidentale (Davis & Carter, 1978)"
 ]
}

 The dataset includes 55 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005123-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8n2z6
title: Occurrence Download

description: A dataset containing 277 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Bocageopsis mattogrossensis (R.E.Fr.) R.E.Fr., Bocagea mattogrossensis R.E.Fr.)"
 ]
}

 The dataset includes 277 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005124-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nseayj
title: Occurrence Download

description: A dataset containing 1847 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Guatteria megalophylla Diels, Guatteria megalophylla var. deminuta R.E.Fr., Guatteria melosma Diels)"
 ]
}

 The dataset includes 1847 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005125-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqnem2
title: Occurrence Download

description: A dataset containing 211 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Lophostoma silvicola d'Orbigny, 1836"
 ]
}

 The dataset includes 211 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005127-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pct58h
title: Occurrence Download

description: A dataset containing 844 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Xylopia polyantha R.E.Fr.)"
 ]
}

 The dataset includes 844 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005126-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pqut8e
title: Occurrence Download

description: A dataset containing 2968 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Xylopia frutescens Aubl.)"
 ]
}

 The dataset includes 2968 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005128-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mfk7ne
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Macrophyllum macrophyllum (Schinz, 1821)"
 ]
}

 The dataset includes 30 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005129-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z42a9h
title: Occurrence Download

description: A dataset containing 1238 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Xylopia benthamii R.E.Fr., Xylopia ulei Diels)"
 ]
}

 The dataset includes 1238 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005130-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eadpex
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Phylloderma stenops Peters, 1865"
 ]
}

 The dataset includes 19 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005131-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wswvx
title: Occurrence Download

description: A dataset containing 596 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Guatteria foliosa Benth.)"
 ]
}

 The dataset includes 596 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005133-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kwb3p9
title: Occurrence Download

description: A dataset containing 1040 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Xylopia amazonica R.E.Fr.)"
 ]
}

 The dataset includes 1040 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005134-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26131195
title: Multipoint Acceleration vs distance raw data

description: Ground vibration acceleration raw data in metres per second squared measured against distance from the rail vibration sources and farther away.Digital accelerometer sensors used at the various points of data logging.
DOI: 10.6084/m9.figshare.26131195.v1
title: Multipoint Acceleration vs distance raw data

description: Ground vibration acceleration raw data in metres per second squared measured against distance from the rail vibration sources and farther away.Digital accelerometer sensors used at the various points of data logging.
DOI: 10.15468/dl.y95jw5
title: Occurrence Download

description: A dataset containing 1773 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Bocageopsis multiflora (Mart.) R.E.Fr., Bocagea multiflora Mart., Guatteria multiflora Poepp. ex Baill., Bocageopsis multiflora var. angustifolia R.E.Fr.)"
 ]
}

 The dataset includes 1773 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005136-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12594614
title: vireo_latimeri_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.12594615
title: vireo_latimeri_zanfona_1.fasta.gz

description: .
DOI: 10.15468/dl.ecsw8b
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ismene amancaes (Ruiz & Pav.) Herb."
 ]
}

 The dataset includes 103 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005138-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7jyf4
title: Occurrence Download

description: A dataset containing 162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Phyllostomus discolor Wagner, 1843"
 ]
}

 The dataset includes 162 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005137-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3jcyjh
title: Occurrence Download

description: A dataset containing 1047 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Oxandra xylopioides Diels, Oxandra major R.E.Fr.)"
 ]
}

 The dataset includes 1047 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005139-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xasyxb
title: Occurrence Download

description: A dataset containing 714 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sorbus sambucifolia (Cham. & Schltdl.) M.Roem.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "Country is Russian Federation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 714 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037313-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8u7sk4
title: Occurrence Download

description: A dataset containing 873972 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Silene gallica L., Diplotaxis muralis (L.) DC., Erysimum repandum L., Lepidium perfoliatum L., Lepidium densiflorum Schrad., Lepidium bonariense L., Alyssum alyssoides (L.) L., Herissantia crispa (L.) Brizicky, Malvastrum americanum (L.) Torr., Corchorus olitorius L., Miconia crenata (Vahl) Michelang., Psidium guajava L., Eucalyptus robusta Sm., Eucalyptus globulus subsp. maidenii (F.Muell.) J.B.Kirkp., Eucalyptus globulus Labill., Eucalyptus exserta F.Muell., Oenothera villosa Thunb., Oenothera tetraptera Cav., Oenothera stricta Link, Oenothera speciosa Nutt., Oenothera rosea Aiton, Oenothera parviflora L., Oenothera oakesiana (A.Gray) J.W.Robbins ex S.Watson, Oenothera drummondii Hook., Clarkia pulchella Pursh, Ludwigia leptocarpa (Nutt.) H.Hara, Sonneratia apetala Buch.-Ham., Phyllanthus debilis J.G.Klein ex Willd., Euphorbia tirucalli L., Euphorbia serpens Kunth, Euphorbia pulcherrima Willd. ex Klotzsch, Euphorbia marginata Pursh, Euphorbia hyssopifolia L., Euphorbia chamaeclada Ule, Euphorbia antiquorum L., Croton hirtus L'Hér., Passiflora quadrangularis L., Passiflora edulis Sims, Oxalis triangularis A.St.-Hil., Oxalis bowiei W.T.Aiton ex G.Don, Begonia cucullata Willd., Echinocystis lobata (Michx.) Torr. & A.Gray, Trifolium incarnatum L., Trifolium hybridum L.)"
 ]
}

 The dataset includes 873972 records from 3208 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037297-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d9wsse
title: Occurrence Download

description: A dataset containing 2507 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salix pyrenaica Gouan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2507 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084384-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-140252
title: Renewal, no. 93 (June/July 1981)

description: [description english/roman)] Renewal, no. 93 (June/July 1981). Published six times per year.
DOI: 10.15468/dl.a4hj8c
title: Occurrence Download

description: A dataset containing 394 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Podarcis peloponnesiacus (Bibron & Bory, 1833))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 394 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026412-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zrp7cd
title: Occurrence Download

description: A dataset containing 515 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea ×pouzinii DC."
 ]
}

 The dataset includes 515 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006137-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-140021
title: Renewal, no. 89 (Oct./Nov. 1980)

description: [description english/roman)] Renewal, no. 89 (Oct./Nov. 1980). Published six times per year.
DOI: 10.15468/dl.bnkv7h
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coralliophila bulbiformis (Conrad, 1837)"
 ]
}

 The dataset includes 282 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084386-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-140241
title: Renewal, no. 93 (June/July 1981)

description: [description english/roman)] Renewal, no. 93 (June/July 1981). Published six times per year.
DOI: 10.15468/dl.esnexk
title: Occurrence Download

description: A dataset containing 3155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudemys texana Baur, 1893)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3155 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026402-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jxumna
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ptychohyla legleri (Taylor, 1958)"
 ]
}

 The dataset includes 55 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004764-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9kkm8j
title: Occurrence Download

description: A dataset containing 75 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Asthenothaerus diegensis (Dall, 1915)"
 ]
}

 The dataset includes 75 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0104431-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-140229
title: Renewal, no. 93 (June/July 1981)

description: [description english/roman)] Renewal, no. 93 (June/July 1981). Published six times per year.
DOI: 10.15468/dl.vhx48h
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Heteronotia spelea (Kluge, 1963), Heteronota spelea Kluge, 1963)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 149 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026408-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-140235
title: Renewal, no. 93 (June/July 1981)

description: [description english/roman)] Renewal, no. 93 (June/July 1981). Published six times per year.
DOI: 10.15468/dl.a6jbw6
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-74.0248634999999950 40.7878480999999979, -74.0248634999999950 40.7905529100000024, -74.0248634999999950 40.7921133700000027, -74.0248634999999950 40.7945060799999979, -74.0248634999999950 40.7964826700000032, -74.0248634999999950 40.7993955399999990, -74.0248634999999950 40.8018922899999978, -74.0248634999999950 40.8042850000000001, -74.0230997999999971 40.8042850000000001, -74.0209211100000033 40.8042850000000001, -74.0195724000000013 40.8042850000000001, -74.0172899699999931 40.8042850000000001, -74.0144887999999952 40.8042850000000001, -74.0144887999999952 40.8025164700000005, -74.0144887999999952 40.8006439099999980, -74.0144887999999952 40.7977310500000030, -74.0144887999999952 40.7962746099999976, -74.0144887999999952 40.7948181800000000, -74.0144887999999952 40.7925295000000006, -74.0144887999999952 40.7914891900000001, -74.0144887999999952 40.7895126000000019, -74.0144887999999952 40.7878480999999979, -74.0171862199999993 40.7878480999999979, -74.0192611599999992 40.7878480999999979, -74.0207136199999951 40.7878480999999979, -74.0230997999999971 40.7878480999999979, -74.0248634999999950 40.7878480999999979))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 78 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084439-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-140273
title: Renewal, no. 94 (Aug./Sept. 1981)

description: [description english/roman)] Renewal, no. 94 (Aug./Sept. 1981). Published six times per year.
DOI: 10.15468/dl.xijvsd
title: Occurrence Download

description: A dataset containing 164528 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Year 1948-1949",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 164528 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004764-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3hdhtb
title: Occurrence Download

description: A dataset containing 32804 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Brazil",
 "GadmGid is BRA.14_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is CC-BY 4.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Arthropoda",
 "Year 2001-2022"
 ]
}

 The dataset includes 32804 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034161-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-140225
title: Renewal, no. 93 (June/July 1981)

description: [description english/roman)] Renewal, no. 93 (June/July 1981). Published six times per year.
DOI: 10.15468/dl.mjnydj
title: Occurrence Download

description: A dataset containing 6299 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-74.0529690999999985 40.7158546000000001, -74.0529690999999985 40.7170020800000003, -74.0529690999999985 40.7187233000000006, -74.0529690999999985 40.7198707900000016, -74.0529690999999985 40.7219198599999999, -74.0529690999999985 40.7240509000000017, -74.0514114700000050 40.7240509000000017, -74.0490340099999997 40.7240509000000017, -74.0473123999999956 40.7240509000000017, -74.0456727699999959 40.7240509000000017, -74.0432133200000067 40.7240509000000017, -74.0420656000000008 40.7240509000000017, -74.0420656000000008 40.7229853799999972, -74.0420656000000008 40.7214280800000026, -74.0420656000000008 40.7195429399999966, -74.0420656000000008 40.7180675999999977, -74.0420656000000008 40.7167561899999981, -74.0420656000000008 40.7158546000000001, -74.0435412500000041 40.7158546000000001, -74.0454268200000030 40.7158546000000001, -74.0468205100000034 40.7158546000000001, -74.0488700399999971 40.7158546000000001, -74.0500997700000028 40.7158546000000001, -74.0514934499999953 40.7158546000000001, -74.0529690999999985 40.7158546000000001))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 6299 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084392-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.