cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26953963
title: Supplementary Material for: p16 Immunohistochemical Patterns in Triple-Negative Breast Cancer: Clinical and Genomic Similarities of the p16 Diffuse Pattern to pRB Deficiency

description: Introduction: Triple-negative breast cancer (TNBC) is associated with alterations in the retinoblastoma pathway. As a consequence of retinoblastoma protein (pRB) loss, compensatory upregulation of p16 occurs due to the loss of phosphorylated pRB-mediated negative feedback on p16 expression. The aim of this study is to investigate the clinicopathologic and genomic characteristics associated with the diffuse pattern of p16 immunohistochemistry (IHC) in TNBC. Methods: The study analyzed surgically resected TNBC for whole-exome sequencing in 113 cases and for cDNA microarray in 144 cases. The p16 IHC results were classified into two patterns: diffuse and negative/mosaic. 
Results: In the entire cohort (n = 257), the diffuse pattern of p16 IHC was observed in 123 (47.9%) patients and the negative/mosaic pattern in 134 (52.1%). Bi-allelic RB1 inactivation was observed in 14.3% of patients with the diffuse pattern. The diffuse pattern of p16 IHC showed more frequent RB1 alterations and cell cycle progression signatures, a higher Ki-67 labeling index, more frequent chromosome segment copy number changes, a higher frequency of homologous recombination deficiency high, and immune-related signatures. PIK3CA mutations were more frequent in the negative/mosaic pattern. CCND1 amplification was identified in five cases, all with the negative/mosaic pattern
Conclusion: In TNBC, the diffuse p16 pattern shows clinical and genomic similarities to pRB-deficient tumors, suggesting shared characteristics. This suggests that p16 IHC testing may provide new therapeutic approaches, underscoring its potential clinical importance.
DOI: 10.15468/8w2uje
title: msc_biodiversityinformatics_studentprojectdata

description: This contains data from postgraduate students from the MSc Biodiversity Informatics students at MUST. This programme was developed with funding from JRS Biodiversity Foundation. Data sents from Cohort 1 and 2 were collected from student projects funded by small grants from JRS funding. Projects cover both freshwater and terrestrial systems
DOI: 10.34740/kaggle/dsv/9330962
title: best horror movies
DOI: 10.5281/zenodo.13709537
title: FRAMEWORK FOR A VOLUME MODEL FOR MONOCLINIC AMPHIBOLE - Data and Code

description: This upload includes the data and code I used to calibrate a volume model for monoclinic amphoboles.
DOI: 10.5281/zenodo.13709538
title: FRAMEWORK FOR A VOLUME MODEL FOR MONOCLINIC AMPHIBOLE - Data and Code

description: This upload includes the data and code I used to calibrate a volume model for monoclinic amphoboles.
DOI: 10.5281/zenodo.13471041
title: Sentinel-1 interferograms and weather-based tropospheric delays maps (ERA5, GACOS) for two volcanoes: Piton de la Fournaise and Merapi

description: InSAR Sentinel-1 dataset and weather-based models used in the paper "Benefits of GNSS local observations compared to global weather-based models for InSAR tropospheric corrections over tropical volcanoes: case studies of Piton de la Fournaise and Merapi" by Albino et al. (2024).

The two zip files are associated with the two targets: REUNION_ISLAND and MERAPI. The directories "ERA5" and "GACOS" contain the GACOS and ERA5 tropospheric delay maps per epoch in geotiff format, respectively. The directory "INTERFEROGRAM" contains the unwrapped interferograms in geotiff format. The "AUX" directory contains the DEM and incidence angle in geotiff format.
DOI: 10.25388/nwu.26947810
title: Untitled Item

description: <b>Exploring the care leaving experiences of youth who have exited the foster care system from rural</b><b>Fetakgomo-Tubatse Municipality, Sekhukhune Limpopo province</b>Foster care leavers (FCLs) acknowledge the care, support, and protection the youth need. Many do not achieve their educational goals, leading to unemployment and poverty. In rural areas, limited resources, discrimination, and cultural factors often hinder the establishment of consistent social support networks.Transitioning out of care is a multiple, diverse, and complex experience that requires balancing practical needs, emotional desires, and social influences, especially in rural, resource-limited areas. FCLs' experiences from kinship care and the perspectives of social workers post-exit shed light on the impact of limited supportive policies.The study followed a qualitative exploratory design to gain better insight into FCLs’ experiences after leaving foster care. Participants from young adult FCLs (YAFCL) (at least 10, any gender, under 25 years) and eight social workers working in foster care for 12 months were purposively selected. Data were collected through semi-structured face-to-face interviews. Ecological systems theory was used to guide the study. Data were analysed and interpreted using thematic analysis.Five main themes derived from the data were foster care systems, strengths and shortcomings, environmental influences, reflection on pre- and post-care support, and novel hardship. The research summary discusses FCLs exceeding circumstances, needs, and recommendations to improve the foster care system.This study anticipates contributing to the needed policy for FCLs and adding to the local knowledge of FCLs' experiences within the Limpopo Province in Sekhukhune district, Fetakgomo-Tubatse municipality. <br><br><br>
DOI: 10.25388/nwu.26947810.v1
title: Untitled Item

description: <b>Exploring the care leaving experiences of youth who have exited the foster care system from rural</b><b>Fetakgomo-Tubatse Municipality, Sekhukhune Limpopo province</b>Foster care leavers (FCLs) acknowledge the care, support, and protection the youth need. Many do not achieve their educational goals, leading to unemployment and poverty. In rural areas, limited resources, discrimination, and cultural factors often hinder the establishment of consistent social support networks.Transitioning out of care is a multiple, diverse, and complex experience that requires balancing practical needs, emotional desires, and social influences, especially in rural, resource-limited areas. FCLs' experiences from kinship care and the perspectives of social workers post-exit shed light on the impact of limited supportive policies.The study followed a qualitative exploratory design to gain better insight into FCLs’ experiences after leaving foster care. Participants from young adult FCLs (YAFCL) (at least 10, any gender, under 25 years) and eight social workers working in foster care for 12 months were purposively selected. Data were collected through semi-structured face-to-face interviews. Ecological systems theory was used to guide the study. Data were analysed and interpreted using thematic analysis.Five main themes derived from the data were foster care systems, strengths and shortcomings, environmental influences, reflection on pre- and post-care support, and novel hardship. The research summary discusses FCLs exceeding circumstances, needs, and recommendations to improve the foster care system.This study anticipates contributing to the needed policy for FCLs and adding to the local knowledge of FCLs' experiences within the Limpopo Province in Sekhukhune district, Fetakgomo-Tubatse municipality. <br><br><br>
DOI: 10.15468/dl.ee5awn
title: Occurrence Download

description: A dataset containing 11426 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spodoptera frugiperda J.E.Smith, 1797"
 ]
}

 The dataset includes 11426 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0118346-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26780035
title: Supplementary Material for: Deciphering Breast Origin in Malignant Effusions: The Diagnostic Utility of an MGP, GATA-3, and TRPS-1 Immunocytochemical Panel

description: Introduction: Defining the origin of metastatic cancer is crucial for establishing an optimal treatment strategy, especially when obtaining sufficient tissue from secondary malignancies is limited. While cytological examination is often used in this diagnostic setting, morphologic analysis alone often fails to differentiate metastases derived from the breast from other primaries. The hormone receptor, human epidermal growth factor receptor-2 (HER2), gross cystic disease fluid protein 15 (GCDFP-15), and mammaglobin immunohistochemistry are often used to diagnose metastatic breast cancer. But their effectiveness decreases in estrogen-receptor (ER)-negative breast cancers, including the triple-negative breast cancer (TNBC) subtype. 
Methods: We conducted a comprehensive evaluation of GATA-binding protein 3 (GATA-3), trichorhinophalangeal syndrome type 1 (TRPS-1), and Matrix Gla Protein (MGP) immunochemistry across 140 effusion cytology specimens with metastatic adenocarcinoma derived from various primaries, including the breast, colon, pancreaticobiliary, lung, ovary, and stomach. 
Results: The expression rates of these immunomarkers were significantly higher in metastatic cancers originating from the breast than in other primaries. In TNBC, TRPS-1 (80.00%) and MGP (65.00%) exhibited higher positivity rates compared to GATA-3 (40.00%). Additionally, our data suggests that an immunohistochemical panel comprising MGP, GATA-3, and TRPS-1 significantly enhances the detection of metastatic breast cancer in effusion cytology specimens, including TNBC in particular. When considering dual-marker positivity, the diagnostic accuracy was calculated to be 89.29% across all breast cancer subtypes and 92.93% for TNBC. 
Conclusions: MGP appears to be a robust marker for identifying metastatic breast cancer in malignant effusions, especially TNBC. MGP notably enhances diagnostic accuracy when incorporated together with GATA-3 and TRPS-1 in an immunohistochemical panel.
DOI: 10.6084/m9.figshare.26780035.v1
title: Supplementary Material for: Deciphering Breast Origin in Malignant Effusions: The Diagnostic Utility of an MGP, GATA-3, and TRPS-1 Immunocytochemical Panel

description: Introduction: Defining the origin of metastatic cancer is crucial for establishing an optimal treatment strategy, especially when obtaining sufficient tissue from secondary malignancies is limited. While cytological examination is often used in this diagnostic setting, morphologic analysis alone often fails to differentiate metastases derived from the breast from other primaries. The hormone receptor, human epidermal growth factor receptor-2 (HER2), gross cystic disease fluid protein 15 (GCDFP-15), and mammaglobin immunohistochemistry are often used to diagnose metastatic breast cancer. But their effectiveness decreases in estrogen-receptor (ER)-negative breast cancers, including the triple-negative breast cancer (TNBC) subtype. 
Methods: We conducted a comprehensive evaluation of GATA-binding protein 3 (GATA-3), trichorhinophalangeal syndrome type 1 (TRPS-1), and Matrix Gla Protein (MGP) immunochemistry across 140 effusion cytology specimens with metastatic adenocarcinoma derived from various primaries, including the breast, colon, pancreaticobiliary, lung, ovary, and stomach. 
Results: The expression rates of these immunomarkers were significantly higher in metastatic cancers originating from the breast than in other primaries. In TNBC, TRPS-1 (80.00%) and MGP (65.00%) exhibited higher positivity rates compared to GATA-3 (40.00%). Additionally, our data suggests that an immunohistochemical panel comprising MGP, GATA-3, and TRPS-1 significantly enhances the detection of metastatic breast cancer in effusion cytology specimens, including TNBC in particular. When considering dual-marker positivity, the diagnostic accuracy was calculated to be 89.29% across all breast cancer subtypes and 92.93% for TNBC. 
Conclusions: MGP appears to be a robust marker for identifying metastatic breast cancer in malignant effusions, especially TNBC. MGP notably enhances diagnostic accuracy when incorporated together with GATA-3 and TRPS-1 in an immunohistochemical panel.
DOI: 10.15468/dl.4a6qks
title: Occurrence Download

description: A dataset containing 4049958 species occurrences available in GBIF matching the query:
{
 "GadmGid" : [
 "is KOR"
 ]
}

 The dataset includes 4049958 records from 730 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0118345-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10710427
title: Neither alpha-synuclein-preformed fibrils derived from patients with GBA1 mutations nor the host murine genotype significantly influence seeding efficacy in the mouse olfactory bulb

description: Data sets for 

Neither alpha-synuclein-preformed fibrils derived from patients with GBA1 mutations nor the host murine genotype significantly influence seeding efficacy in the mouse olfactory bulb
DOI: 10.15468/dl.59ffvg
title: Occurrence Download

description: A dataset containing 7843 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trachycarpus fortunei (Hook.) H.Wendl."
 ]
}

 The dataset includes 7843 records from 251 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127781-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e4ez6n
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vaccinium jagorii Warb."
 ]
}

 The dataset includes 63 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127782-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u2b2ta
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trigonostemon wetriifolius Airy Shaw & Ng"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127783-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k43hev
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helianthemum canum (L.) Baumg.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127784-240321170329656/datasets/export for details.
DOI: 10.15468/dl.ztehvq
title: Occurrence Download

description: A dataset containing 48627 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acorus calamus L."
 ]
}

 The dataset includes 48627 records from 502 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127730-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.puk67j
title: Occurrence Download

description: A dataset containing 241 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tricalysia ambrensis Ranariv. & De Block"
 ]
}

 The dataset includes 241 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127785-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jdtesj
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uapaca ambanjensis Leandri"
 ]
}

 The dataset includes 88 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127787-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kg3xjg
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thymus gobi-altaicus (N.Ulziykh.) Kamelin & A.L.Budantsev"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127786-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rbmsad
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helianthemum cinereum (Cav.) Pers.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127791-240321170329656/datasets/export for details.
DOI: 10.15468/dl.y7kr9j
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trigonostemon whiteanus (Croizat) Airy Shaw"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127789-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ppsmnf
title: Occurrence Download

description: A dataset containing 1728 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "TaxonKey is Loxodonta africana (Blumenbach, 1797)"
 ]
}

 The dataset includes 1728 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127788-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k3x7bs
title: Occurrence Download

description: A dataset containing 2991 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vaccinium japonicum Miq."
 ]
}

 The dataset includes 2991 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127790-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rju9nf
title: Occurrence Download

description: A dataset containing 254650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is BeeWalk bumblebee distributions for Great Britain 2008-2022",
 "Year 2010-2024"
 ]
}

 The dataset includes 254650 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127704-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6xqv3e
title: Occurrence Download

description: A dataset containing 15392 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sprattus sprattus (Linnaeus, 1758)"
 ]
}

 The dataset includes 15392 records from 184 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127792-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.398pgy
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trachycarpus geminisectus Spanner, Gibbons, V.D.Nguyen & T.P.Anh"
 ]
}

 The dataset includes 24 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127793-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mmpted
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tricalysia amplexicaulis Robbr."
 ]
}

 The dataset includes 109 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127794-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mh5tjd
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uapaca amplifolia Denis"
 ]
}

 The dataset includes 80 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127795-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ynfqk2
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio coincyi Rouy"
 ]
}

 The dataset includes 61 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127797-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.har7cm
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thymus gobicus Czern."
 ]
}

 The dataset includes 67 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127796-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sufnnr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helianthemum hirtum (L.) Mill.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127800-240321170329656/datasets/export for details.
DOI: 10.15468/dl.snzkdr
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trigonostemon wildeorum R.Y.Yu & Welzen"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127799-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b692wm
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vaccinium jevidalianum Smitinand & P.H.Hô"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127802-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.