cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21310708.v1
title: Additional file 2 of Construction of a transposase accessible chromatin landscape reveals chromatin state of repeat elements and potential causal variant for complex traits in pigs

description: Additional file 2: Fig. S1. The analysis process and characteristics of peaks. (a) and (b) The ATAC-seq signal enrichment around TSSs and insert size distribution of ATAC-seq for 2 samples (brain_sample1 and brain_sample2). (c) Proportion of tissue-specific peaks that were distal peaks or proximal peaks. (d) Distribution of peak size obtained in this study. Fig. S2. Identifying the functional pathway and tissue specificity via RNA-seq. (a) Hierarchical clustering using gene expression. (b) Functional enrichment of tissue-specific expression genes for each tissue based on Gene Ontology (GO) biological processes (left). Distribution of the number of tissue-specific genes (right). (c) Representative examples of heart specific gene which is highly expressed in heart tissue. (d) Bar plot showing representative biological processes enriched in target genes of the system specific peaks and conserved peaks. Different colors refer to different systems, and light yellow indicates biological processes enriched in target genes of conserved peaks. (e) Bar plot showing peak intensity of liver specific peaks which located close to ARG1 (a protein coding gene expressed primarily in the liver and involved in the urea cycle). (f) Functional enrichment of genes for each tissue based on GO biological processes. The columns represent 20 tissues. The rows represent GO terms in each tissue (upper). Representative examples of enriched biological processes in target genes of heart specific peaks (bottom). Fig. S3. Hierarchical clustering inferred from peak intensity and gene expression. (a) Hierarchical clustering using peak intensity. The top 100,000 peaks with high intensity were used for the analysis. (b) Hierarchical clustering using gene expression. The top 5000 highly variable genes were used for the analysis. Fig. S4. The flowchart and outcomes from the correlation between peak intensity and gene expression.
DOI: 10.6084/m9.figshare.15020576.v1
title: Additional file 3 of Application of CRISPR/Cas9 technology in wild apple (Malus sieverii) for paired sites gene editing

description: Additional file 3. Predicted Off-target site and related primers.
DOI: 10.6084/m9.figshare.15020582
title: Additional file 5 of Application of CRISPR/Cas9 technology in wild apple (Malus sieverii) for paired sites gene editing

description: Additional file 5. Sanger sequencing of target site.
DOI: 10.6084/m9.figshare.15020576
title: Additional file 3 of Application of CRISPR/Cas9 technology in wild apple (Malus sieverii) for paired sites gene editing

description: Additional file 3. Predicted Off-target site and related primers.
DOI: 10.6084/m9.figshare.15020582.v1
title: Additional file 5 of Application of CRISPR/Cas9 technology in wild apple (Malus sieverii) for paired sites gene editing

description: Additional file 5. Sanger sequencing of target site.
DOI: 10.6084/m9.figshare.15020579.v1
title: Additional file 4 of Application of CRISPR/Cas9 technology in wild apple (Malus sieverii) for paired sites gene editing

description: Additional file 4. Off target site Sanger sequencing.
DOI: 10.15468/dl.xvxf9f
title: Occurrence Download

description: A dataset containing 925227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hylocichla mustelina (Gmelin, 1789)",
 "Year 2000-2021"
 ]
}

 The dataset includes 925227 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242244-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzbu5t
title: Occurrence Download

description: A dataset containing 225 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron barbatum Wall. ex G.Don"
 ]
}

 The dataset includes 225 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041731-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7psnm2
title: Occurrence Download

description: A dataset containing 503567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abacarus hystrix (Nalepa, 1896), Abaeis nicippe (Cramer, 1779), Abarema sapindoides (A.Cunn. ex Sweet) Kosterm., Abbottina rivularis (Basilewsky, 1855), Abelia chinensis R.Br., Vesalea floribunda M.Martens & Galeotti, Abelia uniflora R.Br., Abelia uniflora R.Br., Abelmoschus esculentus (L.) Moench, Abelmoschus esculentus (L.) Moench, Abelmoschus manihot (L.) Medik., Abelmoschus moschatus (L.) Medik., Abelmoschus moschatus (L.) Medik., Abgrallaspis cyanophylli (Signoret, 1869), Dynaspidiotus degeneratus (Leonardi, 1896), Abia fasciata (Linnaeus, 1758), Abies alba Mill., Abies amabilis Douglas ex J.Forbes, Abies balsamea (L.) Mill., Abies cephalonica Loudon, Abies concolor (Gordon) Lindl. ex Hildebr., Abies firma Siebold & Zucc., Abies fraseri (Pursh) Poir., Abies grandis (Douglas ex D.Don) Lindl., Abies grandis (Douglas ex D.Don) Lindl., Abies homolepis Siebold & Zucc., Abies koreana E.H.Wilson, Abies lasiocarpa (Hook.) Nutt., Abies concolor (Gordon) Lindl. ex Hildebr., Abies magnifica A.Murray bis, Abies mariesii Mast., Abies nordmanniana (Steven) Spach, Abies nordmanniana (Steven) Spach, Abies balsamea (L.) Mill., Abies pindrow (Royle ex D.Don) Royle, Abies pinsapo Boiss., Abies procera Rehd., Abies religiosa (Kunth) Schltdl. & Cham., Abies sachalinensis (F.Schmidt) Mast., Abies sibirica Ledeb., Abies spectabilis (D.Don) Mirb., Abies veitchii Lindl., Ablattaria laevigata (Fabricius, 1775), Ablerus chionaspidis (Howard, 1914), Ablerus clisiocampae (Ashmead, 1894), Ablerus perspeciosus Girault, 1916, Abra segmentum (Récluz, 1843), Abramis brama (Linnaeus, 1758))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 503567 records from 1001 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248685-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pj6da3
title: Occurrence Download

description: A dataset containing 392 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia chamaedryoides Cav."
 ]
}

 The dataset includes 392 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065571-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c3dpdw
title: Occurrence Download

description: A dataset containing 107 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oxytropis yunnanensis Franch.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 107 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0320846-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rfl2hp
title: Occurrence Download

description: A dataset containing 7504 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus mugo Turra",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation"
 ]
 },
 "HasCoordinate is true",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 7504 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009815-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w79wpx
title: Occurrence Download

description: A dataset containing 5192 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Setophaga petechia (Linnaeus, 1766)",
 "Year 2011-2018"
 ]
}

 The dataset includes 5192 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242259-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xrvusn
title: Occurrence Download

description: A dataset containing 424 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fuchsia ×hybrida Voss"
 ]
}

 The dataset includes 424 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049987-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4rk0lb
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "Year 1950-2019",
 "Geometry POLYGON((-143.99324 -45.73402,21.99324 -45.73402,21.99324 20.73402,-143.99324 20.73402,-143.99324 -45.73402))",
 "HasCoordinate is true",
 "TaxonKey is Inga marginata Willd.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 23 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009815-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k4cjsf
title: Occurrence Download

description: A dataset containing 233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-76.14014 -19.60449,-78.60596 -48.02979,-46.33057 -47.15088,-39.93408 -19.85596,-71.52954 -17.4231,-75.62744 -19.61182,-76.14014 -19.60449))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tetragonia L."
 ]
}

 The dataset includes 233 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0287614-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.paw7ym
title: Occurrence Download

description: A dataset containing 370 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron rex subsp. fictolacteum (Balf.fil.) D.F.Chamb."
 ]
}

 The dataset includes 370 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245022-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jfxqyt
title: Occurrence Download

description: A dataset containing 558037 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calluna vulgaris (L.) Hull"
 ]
}

 The dataset includes 558037 records from 691 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059710-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.clvzl5
title: Occurrence Download

description: A dataset containing 287 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Durio zibethinus Murray"
 ]
}

 The dataset includes 287 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004349-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8drps9
title: Occurrence Download

description: A dataset containing 1162 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cirsium oligophyllum (Franch. & Sav.) Matsum."
 ]
}

 The dataset includes 1162 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138568-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g9n39n
title: Occurrence Download

description: A dataset containing 174320 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Araneae"
 ]
}

 The dataset includes 174320 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008103-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsgzng
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Meiofauna abundance in sediment core 12930-075"
 ]
}

 The dataset includes 23 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004349-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7z3kfj
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Rubus wangii F.P.Metcalf"
 ]
}

 The dataset includes 37 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138571-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t2ju23
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is MEX",
 "OccurrenceStatus is Present",
 "TaxonKey is Commelina caroliniana Walter"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013434-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oj3vaf
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chionochloa spiralis Zotov"
 ]
}

 The dataset includes 15 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004349-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xsax7e
title: Occurrence Download

description: A dataset containing 1883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is United States of America",
 "TaxonKey is Lonicera sempervirens L.",
 "Year 1950-2023"
 ]
}

 The dataset includes 1883 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025630-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zwx8l0
title: Occurrence Download

description: A dataset containing 1497 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-87.15692 20.56886,-87.16183 20.58392,-87.1893 20.62482,-87.228 20.66338,-87.28293 20.64001,-87.41028 20.51261,-87.30362 20.4259,-87.29706 20.43467,-87.2877 20.44812,-87.27584 20.46158,-87.25836 20.48029,-87.23121 20.50602,-87.2156 20.51362,-87.2053 20.52005,-87.19937 20.5259,-87.1897 20.53671,-87.16972 20.56184,-87.15692 20.56886))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1497 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001937-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sihk6i
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gasteria acinacifolia (J.Jacq.) Haw."
 ]
}

 The dataset includes 101 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004349-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hunpdm
title: Occurrence Download

description: A dataset containing 1733376 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1733376 records from 1283 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013435-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ya4q8
title: Occurrence Download

description: A dataset listing the 15 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Asociación de cactáceas con arbustos en el desierto costero de Topolobampo, Sinaloa",
 "TaxonKey is Cactaceae"
 ]
}

 The dataset's 15 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025627-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ecc2zf
title: Occurrence Download

description: A dataset containing 97 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Vellozia minima Pohl"
 ]
}

 The dataset includes 97 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039235-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sx2b2v
title: Occurrence Download

description: A dataset listing the 129 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Dataset of butterfly monitoring in Sierra Nevada (Spain)"
 ]
}

 The dataset's 129 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017706-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3nkqkc
title: Occurrence Download

description: A dataset containing 6048 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "DatasetKey is one of (Estado actual de conservación de la población de Ceroxylon quindiuense (H.Karst.) H.Wendl. (Arecaceae) en la cuenca del río Tochecito, Tolima, Demografía y propagación de palmas andinas con potencial ornamental en Colombia, Evaluación de los patrones fenológicos y reproductivos de la población de Ceroxylon quindiuense (Arecaceae) en la microcuenca del Río Tochecito, Tolima, iNaturalist Research-grade Observations, Registros de Palma de cera palma (Ceroxylon quindiuense) por medio de fotografías aéreas en el parque Chingaza, Colección de Tejidos del Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH-CT), Herbario Nacional Colombiano (COL), ICN - Universidad Nacional de Colombia, Colección Herbario Federico Medem Bogotá - FMB, Evaluación de especies vegetales aptas para la restauración ecológica de una plantación forestal exótica en la localidad de San Cristóbal - Bogotá)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ceroxylon quindiuense (H.Karst.) H.Wendl."
 ]
}

 The dataset includes 6048 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059552-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nqmrxq
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corydalis flabellata Edgew.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 44 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027849-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tuffm3
title: Occurrence Download

description: A dataset containing 504 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is Material sample"
 ]
}

 The dataset includes 504 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000120-170814131059671/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7rfdh7
title: Occurrence Download

description: A dataset containing 715 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Xenacanthidae",
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 715 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059567-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsqn95
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Cyclopes Gray, 1821"
 ]
}

 The dataset includes 123 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0181831-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e7drzv
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sonerila maculata Roxb.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 145 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027853-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zsh5ul
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus hirtifolia M.L.Vázquez, S.Valencia & Nixon"
 ]
}

 The dataset includes 27 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000120-170817152713382/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.