cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4121/14784369.v1
title: Data underlying the publication: "Distribution and ontogenetic habitat shifts of reef-associated shark species in the northeastern Caribbean"

description: Understanding how reef-associated sharks utilise coastal reef habitats throughout their ontogeny is essential for their effective management. In this study, we assessed the distribution of sharks in the northern Caribbean Netherlands (Saba, Saba Bank and St Eustatius) and ontogenetic shifts in habitat and depth use of the 2 most observed species: Caribbean reef shark Carcharhinus perezi and nurse shark Ginglymostoma cirratum. We used stereo baited remote underwater video (stereo-BRUV) surveys at 376 sites. A total of 126 shark sightings (6 species) were recorded, with C. perezi (n = 72) and G. cirratum (n = 42) most frequently observed. The probability of recording at least 1 shark per deployment ranged from 0.19 to 0.37 and is comparable with shark occurrences in the small number of other stereo-BRUV studies in the Wider Caribbean Region. Habitat type was the most important factor driving reef-associated shark occurrences, with the highest probability of observing C. perezi and G. cirratum in soft-coral habitat. Additionally, occurrences of C. perezi were significantly influenced by the management zone, with highest probabilities of occurrence in no-fishing zones. Almost all observed reef-associated sharks (95.6%) were juveniles, indicating that the study area may be a nursery area. Overall, both species were observed in deeper waters with increasing size, indicating ontogenetic shifts in depth use. Our findings imply that protected areas should not be limited to a single habitat or depth, but focus on protecting a large area with the range of habitats and depths necessary for reef-associated sharks to complete their life cycle.<br>
DOI: 10.34740/kaggle/dsv/3769509
title: AutoXGB
DOI: 10.5281/zenodo.6619766
title: Alles anders? Wie sich Zeitschriften in der Mittelalterforschung durch die Digitalisierung verändern

description: In dieser Seminararbeit wurde untersucht, wie sich deutsch- und englischsprachige Zeitschriften der Mittelalterforschung innerhalb der letzten 20 Jahre verändert haben. Dazu wurden von neun Zeitschriften die Jahrgänge von 1999 und 2019 miteinander verglichen. Neben den Rohdaten ist auch die Auswertung dieser Daten in der Hausarbeit zu finden. Die Seminararbeit wurde im Rahmen des Digital-Humanities-Hauptseminars "Digitalisierung in den Geisteswissenschaften" von Prof. Dr. Patrick Sahle im Sommersemester 2020 an der Bergischen Universität Wuppertal erstellt.
DOI: 10.5281/zenodo.6619765
title: Alles anders? Wie sich Zeitschriften in der Mittelalterforschung durch die Digitalisierung verändern

description: In dieser Seminararbeit wurde untersucht, wie sich deutsch- und englischsprachige Zeitschriften der Mittelalterforschung innerhalb der letzten 20 Jahre verändert haben. Dazu wurden von neun Zeitschriften die Jahrgänge von 1999 und 2019 miteinander verglichen. Neben den Rohdaten ist auch die Auswertung dieser Daten in der Hausarbeit zu finden. Die Seminararbeit wurde im Rahmen des Digital-Humanities-Hauptseminars "Digitalisierung in den Geisteswissenschaften" von Prof. Dr. Patrick Sahle im Sommersemester 2020 an der Bergischen Universität Wuppertal erstellt.
DOI: 10.6084/m9.figshare.20032997
title: Chinese Older Adults’ Preferences and Willingness to Pay for Home and Community-based Services: A Discrete Choice Experiment

description: A multinomial logit (MNL) model, a conditional logit (CL) model, and a mixed logit (MXL) model were individually estimated using STATA V15 software.The WTP in this study was obtained in terms of a non-economic attribute coefficient/economic attribute coefficient ratio.
DOI: 10.6084/m9.figshare.19762270
title: Supplementary Material for: Dexamethasone, a synthetic glucocorticoid, induces the activity of androgen receptor in human dermal papilla cells

description: Psychosocial stress stimulates the secretion of glucocorticoids (GCs), which are stress-related neurohormones. GCs are secreted from hair follicles and promote hair follicle regression by inducing cellular apoptosis. Moreover, the androgen receptor (AR) is abundant in the balding scalp and androgens suppress hair growth by binding to androgen receptor (AR) in androgenetic alopecia (AGA). First, by using immunofluorescence, we investigated whether the treatment of dermal papilla (DP) cells with dexamethasone (DEX), a synthetic GC, causes the translocation of the glucocorticoid receptor (GR) into the nucleus. DEX treatment causes the translocation of the GR into the nucleus. Next, we investigated whether stress-induced GCs affect the AR, a key factor in male pattern baldness. In this study, we first assessed that DEX increases the expression of AR mRNA in non-balding DP cells, which rarely express AR without androgen. RU486, a GR antagonist, attenuated DEX-inducible AR mRNA expression and AR activation in human non-balding DP cells. In addition, AR translocated into the nucleus after DEX treatment. Furthermore, we indeed showed that the expression of AR was induced in the nucleus by DEX in DP cells of human and mouse hair follicles. Our results first suggest that stress-associated hair loss may be due to increased AR expression and activity induced by DEX. These results demonstrate that hair loss occurs in non-balding scalps with low AR expression
DOI: 10.6084/m9.figshare.19762270.v1
title: Supplementary Material for: Dexamethasone, a synthetic glucocorticoid, induces the activity of androgen receptor in human dermal papilla cells

description: Psychosocial stress stimulates the secretion of glucocorticoids (GCs), which are stress-related neurohormones. GCs are secreted from hair follicles and promote hair follicle regression by inducing cellular apoptosis. Moreover, the androgen receptor (AR) is abundant in the balding scalp and androgens suppress hair growth by binding to androgen receptor (AR) in androgenetic alopecia (AGA). First, by using immunofluorescence, we investigated whether the treatment of dermal papilla (DP) cells with dexamethasone (DEX), a synthetic GC, causes the translocation of the glucocorticoid receptor (GR) into the nucleus. DEX treatment causes the translocation of the GR into the nucleus. Next, we investigated whether stress-induced GCs affect the AR, a key factor in male pattern baldness. In this study, we first assessed that DEX increases the expression of AR mRNA in non-balding DP cells, which rarely express AR without androgen. RU486, a GR antagonist, attenuated DEX-inducible AR mRNA expression and AR activation in human non-balding DP cells. In addition, AR translocated into the nucleus after DEX treatment. Furthermore, we indeed showed that the expression of AR was induced in the nucleus by DEX in DP cells of human and mouse hair follicles. Our results first suggest that stress-associated hair loss may be due to increased AR expression and activity induced by DEX. These results demonstrate that hair loss occurs in non-balding scalps with low AR expression
DOI: 10.34740/kaggle/dsv/3769560
title: WallStreetBets 2022
DOI: 10.6084/m9.figshare.20036528
title: Supplementary Material for: Analysis of Geographic and Environmental Factors and Their Association with Cutaneous Melanoma Incidence in Canada

description: <b><i>Background:</i></b> Over 90% of skin cancers including cutaneous melanoma (CM) are related directly to sun exposure. Despite extensive knowledge on ultraviolet radiation’s (UVR) detrimental impact, many still fail to implement sun protection/sun avoidance. Human behavior, attitudes, and cultural norms of individuals and communities heavily depend on the surrounding climate/environment. In many instances, the climate shapes the culture/norms of the society. Canada has vast geographic/environmental differences. <b><i>Methods:</i></b> In the current ecological study, we sought to examine the relationship between various geographic and environmental factors and the distribution of CM incidence by Forward Sortation Area (FSA) postal code across Canada. CM incidence data were extracted from the Canadian Cancer Registry, while environmental data were extracted from the Canadian Urban Environmental Health Research Consortium (greenspace, as measured by the normalized difference vegetation index; annual highest temperature; absolute number and average length of yearly heat events; annual total precipitation [rain and snow]; absolute number and average length of events with precipitation [rain and snow]; and summer UVR index). The above geographic/environmental data by FSA were correlated with the respective CM incidence employing negative binomial regression model. <b><i>Results:</i></b> Our analysis highlights that increases in annual average temperature, summer UVR, and greenspace were associated with higher expected incidence of CM cases, while higher number of annual heat events together with highest annual temperature and higher average number of annual rain events were associated with a decrease in CM incidence rate. This study also highlights regional variation in environmental CM risk factors in Canada. <b><i>Conclusions:</i></b> This national population-based study presents clinically relevant conclusions on weather/geographic variations associated with CM incidence in Canada and will help refine targeted CM prevention campaigns by understanding unique weather/geographic variations in high-risk regions.
DOI: 10.6084/m9.figshare.20035442
title: ModelResults.zip

description: These data are simulated results used in the manuscript titled "Improvement of the aerosol forecast and analysis over East Asia with joint assimilation of two geostationary satellite observations " to Geophysical Research Letters.
DOI: 10.25505/fiz.icsd.cc1xf23j
title: CSD 1770227: Experimental Crystal Structure Determination

description: Related Article: Kurt Mereiter|2013|Min.Petrol.|107|179|doi:10.1007/s00710-012-0261-3
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25z33d
title: CCDC 2024923: Experimental Crystal Structure Determination

description: Related Article: Yanling Zheng, Yang Long, Huihua Gong, Jiaqi Xu, Chunchun Zhang, Haiyan Fu, Xueli Zheng, Hua Chen, Ruixiang Li|2022|Org.Lett.|24|3878|doi:10.1021/acs.orglett.2c01497
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27zrjj
title: CCDC 2085138: Experimental Crystal Structure Determination

description: Related Article: Daniel Duvinage, Pim Puylaert, Erna K. Wieduwilt, Lorraine A. Malaspina, Alison J. Edwards, Enno Lork, Stefan Mebs, Emanuel Hupf, Simon Grabowsky, Jens Beckmann|2022|Inorg.Chem.|61|8406|doi:10.1021/acs.inorgchem.1c03266
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15131/shef.data.20036507.v1
title: Data from laboratory tests on sediment behaviour in drinking water distribution systems

description: Laboratory tests were performed at the University of Sheffield using a full-scale drinking water test rig. Sediment was added to the test rig from different water systems in the UK and Netherlands. The turbidity under different flow conditions was monitoring using a bespoke measurement lens with readings taken at the bottom, middle, and top of the pipe.
DOI: 10.15131/shef.data.20036507
title: Data from laboratory tests on sediment behaviour in drinking water distribution systems

description: Laboratory tests were performed at the University of Sheffield using a full-scale drinking water test rig. Sediment was added to the test rig from different water systems in the UK and Netherlands. The turbidity under different flow conditions was monitoring using a bespoke measurement lens with readings taken at the bottom, middle, and top of the pipe.
DOI: 10.5281/zenodo.6627053
title: Magnetic Soft Robotic Bladder for Assisted Urination

description: The poor contractility of the detrusor muscle in underactive bladders (UABs) fails to increase the pressure inside the UAB, leading to strenuous and incomplete urination. However, existing therapeutic strategies by modulating/repairing detrusor muscles, e.g., neurostimulation and regenerative medicine, still have low efficacy and/or adverse effects. Here, we present an implantable magnetic soft robotic bladder (MRB) that can directly apply mechanical compression to the UAB to assist urination. Composed of a biocompatible elastomer composite with optimized magnetic domains, the MRB enables on-demand contraction of the UAB when actuated by magnetic fields. A representative MRB for an UAB in a porcine model is demonstrated and MRB-assisted urination is validated by in situ computed tomography imaging after 14-day implantation. The urodynamic tests show a series of successful urination with a high pressure increase and fast urine flow. Our work paves the way for developing MRB to assist urination for humans with UABs.
DOI: 10.5281/zenodo.6626560
title: Magnetic Soft Robotic Bladder for Assisted Urination

description: The poor contractility of the detrusor muscle in underactive bladders (UABs) fails to increase the pressure inside the UAB, leading to strenuous and incomplete urination. However, existing therapeutic strategies by modulating/repairing detrusor muscles, e.g., neurostimulation and regenerative medicine, still have low efficacy and/or adverse effects. Here, we present an implantable magnetic soft robotic bladder (MRB) that can directly apply mechanical compression to the UAB to assist urination. Composed of a biocompatible elastomer composite with optimized magnetic domains, the MRB enables on-demand contraction of the UAB when actuated by magnetic fields. A representative MRB for an UAB in a porcine model is demonstrated and MRB-assisted urination is validated by in situ computed tomography imaging after 14-day implantation. The urodynamic tests show a series of successful urination with a high pressure increase and fast urine flow. Our work paves the way for developing MRB to assist urination for humans with UABs.
DOI: 10.25402/cer.20036663
title: Application of quantitative bias analysis for unmeasured confounding in cost–effectiveness modelling - Supplementary material.docx

description: Appendix 1 – Simulation of survival data Appendix 2 – Model parameters and output Appendix 3 – Cost-effectiveness model <strong>Appendix 4 – Supportive results</strong> Appendix 5 – R code
DOI: 10.25402/cer.20036663.v1
title: Application of quantitative bias analysis for unmeasured confounding in cost–effectiveness modelling - Supplementary material.docx

description: Appendix 1 – Simulation of survival data Appendix 2 – Model parameters and output Appendix 3 – Cost-effectiveness model <strong>Appendix 4 – Supportive results</strong> Appendix 5 – R code
DOI: 10.6084/m9.figshare.20036720
title: Supplementary Material for: Neurodevelopmental Outcome of Extremely Low Birth Weight Infants with Cholestasis at 12 and 24 Months

description: <b><i>Introduction:</i></b> The aims of the study were to describe the neurodevelopmental outcome of extremely low birth weight (ELBW) infants with parenteral nutrition-associated cholestasis (PNAC) and to assess whether PNAC is associated with adverse neurodevelopmental outcome. <b><i>Methods:</i></b> The study is a secondary analysis of controlled trial (June 2012–October 2017) on PNAC incidence in ELBW infants receiving two different parenteral lipid emulsions (mixed lipid emulsion containing fish oil vs. soybean oil-based). Neurodevelopmental follow-up at 12- and 24-month corrected age was compared in infants with and without PNAC. A machine learning-based regression analysis was used to assess whether PNAC was associated with adverse neurodevelopmental outcome. <b><i>Results:</i></b> For assessment of neurodevelopmental outcome (Bayley-III), 174 infants were available at 12-month (PNAC: <i>n</i> = 21; no PNAC: <i>n</i> = 153) and 164 infants at 24-month (PNAC: <i>n</i> = 20; no PNAC: <i>n</i> = 144) corrected age. The neurodevelopment of ELBW infants with PNAC was globally delayed, with significantly lower cognitive, language, and motor scores at both 12- and 24-month corrected age. Regression analyses revealed that PNAC was associated with an adverse motor outcome. <b><i>Conclusion:</i></b> ELBW infants with PNAC are at increased risk for adverse neurodevelopmental outcome.
DOI: 10.5281/zenodo.6627072
title: dados do transdutor colado a cuba

description: dados referente aos valores do circuito BVD do transdutor após ser colado na cuba.
DOI: 10.5281/zenodo.6627071
title: dados do transdutor colado a cuba

description: dados referente aos valores do circuito BVD do transdutor após ser colado na cuba.
DOI: 10.6084/m9.figshare.21564285
title: Additional file 12 of FMO3 deficiency of duck leads to decreased lipid deposition and increased antibacterial activity

description: Additional file 12: Table S5. Taxa associated with TMA metabolism using LEfSe analysis.
DOI: 10.6084/m9.figshare.22613933.v1
title: Additional file 1 of Bacterial chondronecrosis with osteomyelitis related Enterococcus cecorum isolates are genetically distinct from the commensal population and are more virulent in an embryo mortality model

description: Additional file 1. Summary of E. cecorum isolates. Swabs were collected from both diseased (top) or healthy (bottom) birds originating from different farms. In case multiple houses were sampled from the same farm, this is indicated in the column “House”.
DOI: 10.6084/m9.figshare.22614052
title: Additional file 2 of Identification of biomarkers and therapeutic targets related to Sepsis-associated encephalopathy in rats by quantitative proteomics

description: Additional file 2. Peptide report.
DOI: 10.6084/m9.figshare.22613788.v1
title: Additional file 7 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 7: Table S7. The repeat sequence distribution in the thirteen Rhizirideum plastomes.
DOI: 10.6084/m9.figshare.22614016.v1
title: Additional file 15 of Transcriptomic analysis reveals the formation mechanism of anemone-type flower in chrysanthemum

description: Additional file 15: Table S5. Primer sequences used in RT-PCR experiments.
DOI: 10.6084/m9.figshare.22614353
title: Additional file 1 of Genome-wide identification and expression pattern analysis of R2R3-MYB transcription factor gene family involved in puerarin biosynthesis and response to hormone in Pueraria lobata var. thomsonii

description: Additional file 1: Table S1. MYB-binding domain of PtMYBs. Table S2. Details information of the identified PtR2R3-MYB genes. Table S3. The prediction of subcellular localization in PtR2R3-MYB proteins. Table S4. Duplication modes and Ka/Ks ratios of R2R3-MYB gene pairs in P. thomsonii. Table S5. Putative functions of the R2R3-MYB proteins in P. thomsonii and Arabidopsis. Table S6. Detailed information for the 10 motifs in the R2R3-MYB proteins of P. thomsonii. Table S7a. Correlation between puerarin contents, SGs, PtR2R3-MYBs by RNA-seq data in P. thomsonii. Table S7b. P values between puerarin contents, SGs, PtR2R3-MYBs by RNA-seq data in P. thomsonii. Table S8. Structural genes related to puerarin biosynthesis. Table S9a. Correlation between puerarin and 46 genes by qRT-PCR data in 9 samples. Table S9b. P values between puerarin and 46 genes by qRT-PCR data in 9 samples. Table S10a. Correlation between puerarin and 46 genes by qRT-PCR data in ZG11. Table S10b. P values between puerarin and 46 genes by qRT-PCR data in ZG11. Table S11a. Correlation between puerarin and 46 genes by qRT-PCR data in ZG39. Table S11b. P values between puerarin and 46 genes by qRT-PCR data in ZG39. Table S12a. Correlation between puerarin and 46 genes by qRT-PCR data in ZG19. Table S12b. P values between puerarin and 46 genes by qRT-PCR data in ZG19. Table S13. Prediction of cis-acting elements in the promoter regions of 44 genes. Table S14a. Correletion between 44 genes qRT-PCR data by GSH treatment in ZG11. Table S14b. P values between 44 genes qRT-PCR data by GSH treatment in ZG11. Table S15a. Correletion between 44 genes qRT-PCR data by MeJA treatment in ZG11. Table S15b. P values between 44 genes qRT-PCR data by MeJA treatment in ZG11. Table S16. Primer sequence for qRT-PCR. Table S17. Puerarin contents and gene expression level by qRT-PCR.
DOI: 10.6084/m9.figshare.22614524.v1
title: Additional file 3 of Genetic screening of a Chinese cohort of children with hearing loss using a next-generation sequencing panel

description: Additional file 3: Table S3. The frequency of mutation site in 5000 normal population.
DOI: 10.6084/m9.figshare.22615114.v1
title: Additional file 4 of SMAD9-MYCN positive feedback loop represents a unique dependency for MYCN-amplified neuroblastoma

description: Additional file 4.
DOI: 10.6084/m9.figshare.22613840.v1
title: Additional file 6 of RNA-seq analysis reveals the critical role of the novel lncRNA BIANCR in intramuscular adipogenesis through the ERK1/2 signaling pathway

description: Additional file 6. Type information of lncRNA.
DOI: 10.6084/m9.figshare.22615123.v1
title: Additional file 7 of SMAD9-MYCN positive feedback loop represents a unique dependency for MYCN-amplified neuroblastoma

description: Additional file 7.
DOI: 10.6084/m9.figshare.22614041
title: Additional file 1 of Identification and validation of crucial lnc-TRIM28-14 and hub genes promoting gastric cancer peritoneal metastasis

description: Additional file 1
DOI: 10.6084/m9.figshare.22614091
title: Additional file 3 of Integrated single-cell and bulk RNA sequencing analysis identifies a cancer-associated fibroblast-related gene signature for predicting survival and therapy in gastric cancer

description: Additional file 3: Table S3. The coefficient of the CAF-related gene signature.
DOI: 10.6084/m9.figshare.22614085
title: Additional file 1 of Integrated single-cell and bulk RNA sequencing analysis identifies a cancer-associated fibroblast-related gene signature for predicting survival and therapy in gastric cancer

description: Additional file 1: Table S1. The primer sequences of the CAF-related genesignature.
DOI: 10.6084/m9.figshare.22613974
title: Additional file 2 of Transcriptomic analysis reveals the formation mechanism of anemone-type flower in chrysanthemum

description: Additional file 2: Table S1. Summary statistics of clean reads in the transcriptomes of Chrysanthemum × morifolium.
DOI: 10.6084/m9.figshare.22614746
title: Additional file 2 of Prenatal social support in low-risk pregnancy shapes placental epigenome

description: Additional file 2: Tables S7–S12. Enrichment and depletion of CpGs in placenta associated with maternal social support in different cell types and tissues for DNAase hypersensitive sites, chromatin marks and H3 histone marks in all pregnancies. Tables S13–S18. Enrichment and depletion of CpGs in placenta associated with maternal social support in different cell types and tissues for DNAase hypersensitive sites, chromatin marks and H3 histone marks in pregnancies with male fetus. Tables S19–S24. Enrichment and depletion of CpGs in placenta associated with maternal social support in different cell types and tissues for DNAase hypersensitive sites, chromatin marks and H3 histone marks in pregnancies with female fetus.