cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/c95hp3m4mz.1
title: A Row Generation Algorithm for Finding Optimal Burning Sequences of Large Graphs - Complementary Data

description: This dataset contains complementary data to the paper "A Row Generation Algorithm for Finding Optimal Burning Sequences of Large Graphs" [1], which proposes an exact algorithm for the Graph Burning Problem, an NP-hard optimization problem that models a form of contagion diffusion on social networks.

Concerning the computational experiments discussed in that paper, we make available:

- Four sets of instances;
- The optimal (or best known) solutions obtained;
- The source code;
- An Appendix with additional details about the results.

The "delta" input sets include graphs that are real-world networks [1,2], while the "grid" input set contains graphs that are square grids.

The directories "delta_10K_instances", "delta_100K_instances", "delta_4M_instances" and "grid_instances" contain files that describe the sets of instances. The first two lines of each file contain:




where and are the number of vertices and edges in the graph. Each of the next lines contains:

 

where and identify a pair of vertices that determines an undirected edge.

The directories "delta_10K_solutions", "delta_100K_solutions", "delta_4M_solutions" and "grid_solutions" contain files that describe the optimal (or best known) solutions for the corresponding sets of instances.

The first line of each file contains:



where is the number of vertices in the burning sequence. Each of the next lines contains:



where identifies a fire source. The fire sources are listed in the same order that they appear in a burning sequence of length .

The directory "source_code" contains the implementations of the exact algorithm proposed in the paper [1], namely, PRYM.

Lastly, the file "appendix.pdf" presents additional details on the results reported in the paper.

This work was supported by grants from Santander Bank, Brazil, Brazilian National Council for Scientific and Technological Development (CNPq), Brazil, São Paulo Research Foundation (FAPESP), Brazil and Fund for Support to Teaching, Research and Outreach Activities (FAEPEX).

Caveat: the opinions, hypotheses and conclusions or recommendations expressed in this material are the sole responsibility of the authors and do not necessarily reflect the views of Santander, CNPq, FAPESP or FAEPEX.


References

[1] F. C. Pereira, P. J. de Rezende, T. Yunes and L. F. B. Morato. A Row Generation Algorithm for Finding Optimal Burning Sequences of Large Graphs. Submitted. 2024.

[2] Jure Leskovec and Andrej Krevl. SNAP Datasets: Stanford Large Network Dataset Collection. 2024. https://snap.stanford.edu/data

[3] Ryan A. Rossi and Nesreen K. Ahmed. The Network Data Repository with Interactive Graph Analytics and Visualization. In: AAAI, 2022. https://networkrepository.com
DOI: 10.17632/c9npfrpyn5.1
title: DataSet Sterilization Processes (Hydrogen Peroxide/Ethylene Oxide) on Commercial 3D-Printed PLA, PLA-FC

description: Data are presented for the study and mechanical and thermal analysis of commercial PLA polymers, PLA+FC, PETG that have been sterilized by hydrogen peroxide and ethylene oxide.
DOI: 10.17632/8mkngdftfp.1
title: Petrogenesis of the Early Paleogene North Island Syenite Complex, Seychelles

description: The dataset consists of analytical methods and the results from analysis. The Appendices (A and B) are related to the methods used to measure the zircon U-Pb age dates. Tables S1-S10 are the geochemical data used to interpret the petrogenesis of the North Island Syenite Complex of the Seychelles and consists of zircon U-Pb ages dates, zircon Hf isotopes, mineral chemistry, whole rock major and trace element chemistry, whole rock Sr-Nd isotopic data, clinopyroxene-liquid temperature estimates, QUIlF calculations, and Rhyolite-MELTS and MELTS modeling results.
DOI: 10.17632/nzt86s3r8p.2
title: Forces and grain-grain contacts in bidisperse beds sheared by viscous fluids II: Data_6rpm

description: These files include all .mat data results for a single case study (6rpm). With this data, we tracked the positions, velocities, forces, and solid contacts experienced by each grain, allowing us to analyze the distribution of forces caused either by fluid interactions or solid-solid contacts within the bed. Additionally, we explored the relationship between force propagation and the reorganization of grains in beds sheared by viscous flow.
DOI: 10.17632/8gbywtd7bv.1
title: Data on Gender-Equitable Healthcare Accessibility in Northern Nigeria

description: Data on Gender-Equity in Healthcare access in Northern Nigeria.
DOI: 10.17632/wh9w9gysd6.2
title: Conventional DSC Data of Isothermally and Non-Isothermally Crystallised Carbon-Fibre-Reinforced Low-Melting Poly(Aryl Ether Ketone)

description: This dataset comprises conventional DSC data regarding the isothermal and non-isothermal crystallisation of a relatively novel low-melting poly(aryl ether ketone) (LM-PAEK) reinforced with carbon fibres (CF), in the form of TC1225 unidirectional tape. The Excel files contain raw data from the DSC instrument as well as processed data of cooling ramps, heating ramps, and isothermal holds. The supplementary material includes screenshots of the processing in the analysis software Trios by TA Instruments, shows exemplary baselines used in the calculation of crystallisation and melting enthalpies, and refers to the corresponding research paper.
DOI: 10.6084/m9.figshare.28239017
title: 宝华山一批次6个样点形态种统计记录与同一批次宏条形码鉴定结果-2

description: 使用形态学手段将标本分为形态种，根据易于观察的形态特征来分类分类群，鉴定时在酒精湿标本上进行，使用双目显微镜，根据外部形态特征分离形态种，此外观察表面纹理，毛和颜色等进行区分，并按目级阶元统计。通过比较形态学分类与宏条形码检测的分类单元数量、科级、属级分类的差异，以及检出频次和物种数量，来验证宏条形码的可靠性。
DOI: 10.6084/m9.figshare.28239017.v1
title: 宝华山一批次6个样点形态种统计记录与同一批次宏条形码鉴定结果-2

description: 使用形态学手段将标本分为形态种，根据易于观察的形态特征来分类分类群，鉴定时在酒精湿标本上进行，使用双目显微镜，根据外部形态特征分离形态种，此外观察表面纹理，毛和颜色等进行区分，并按目级阶元统计。通过比较形态学分类与宏条形码检测的分类单元数量、科级、属级分类的差异，以及检出频次和物种数量，来验证宏条形码的可靠性。
DOI: 10.17632/8gbywtd7bv.2
title: Data on Gender-Equitable Healthcare Accessibility in Northern Nigeria

description: Data on Gender-Equity in Healthcare access in Northern Nigeria.
DOI: 10.17632/ktmvth9796.1
title: Conexões entre os princípios da Cultura Oceânica e as competências específicas da Base Nacional Comum Curricular (Ciências da Natureza - Ensino Médio)

description: Tabela evidenciando possibilidades de conexões entre os princípios da cultura oceânica e as competências específicas das Ciências da Natureza (Ensino Médio) da Base Nacional Comum Curricular brasileira/ Table showing possibilities of connections between the ocean literacy principles and the specific competences of Natural Sciences (High School) of the Brazilian Common Curricular Base.
DOI: 10.17632/ktmvth9796.2
title: Conexões entre os princípios da Cultura Oceânica e as competências específicas da Base Nacional Comum Curricular (Ciências da Natureza - Ensino Médio)

description: Tabela evidenciando possibilidades de conexões entre os princípios da cultura oceânica e as competências específicas das Ciências da Natureza (Ensino Médio) da Base Nacional Comum Curricular brasileira/ Table showing possibilities of connections between the ocean literacy principles and the specific competences of Natural Sciences (High School) of the Brazilian Common Curricular Base.
DOI: 10.17632/ktmvth9796.3
title: Conexões entre os princípios da Cultura Oceânica e as competências específicas da Base Nacional Comum Curricular (Ciências da Natureza - Ensino Médio)

description: Tabela evidenciando possibilidades de conexões entre os princípios da cultura oceânica e as competências específicas das Ciências da Natureza (Ensino Médio) da Base Nacional Comum Curricular brasileira/ Table showing possibilities of connections between the ocean literacy principles and the specific competences of Natural Sciences (High School) of the Brazilian Common Curricular Base.
DOI: 10.17632/ktmvth9796.4
title: Conexões entre os princípios da Cultura Oceânica e as competências específicas da Base Nacional Comum Curricular (Ciências da Natureza - Ensino Médio)

description: Metodologia para a construção de tabelas evidenciando possibilidades de articulação entre os princípios da cultura oceânica e as competências específicas de Ciências da Natureza (Ensino Médio) da Base Nacional Comum Curricular Brasileira.
Resultados que mostram as conexões identificadas, expressas tanto na forma de conteúdos conceituais que podem ser trabalhados em sala de aula quanto na forma de presença e ausência de conexões.
DOI: 10.17632/t2bw2d2hxy.1
title: LDHU3_05.1380

description: Hypothetical protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/cb74tf72gt.1
title: LDHU3_06.0150

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/g5m32ms8zs.1
title: LDHU3_05.1340

description: Hook complex subunit; Leishmania donovani (HU3 strain)
DOI: 10.15468/dl.r8fkn4
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The Hymenoptera collection (EY) of the Muséum national d'Histoire naturelle (MNHN - Paris)",
 "Geometry POLYGON((49.67842 -11.76934,47.45136 -13.31392,44.18261 -15.43322,43.42828 -18.70197,42.38659 -23.91042,46.48151 -26.49669,50.57643 -15.90018,49.67842 -11.76934))"
 ]
}

 The dataset includes 45 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004296-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/26jsdz32hc.4
title: 3-Monochloropropane-1,2-diol reduced bioaccessibility of sn-2 palmitate via bounding with pancreatic lipase in infant formula during gastrointestinal digestion

description: Infant formula contains 3-monochloropropane-1,2-diol esters which are formed during the deodorization step of vegetable oils refining. European Food Safety Authority stated that 3-monochloropropane-1,2-diol esters can be hydrolyzed in the gastrointestinal tract to free-form 3-monochloropropane-1,2-diol, which has potential toxicity and can be rapidly absorbed. Evaluating the effect of 3-monochloropropane-1,2-diol on nutrition absorption is a prerequisite for establishing effective management strategies. A total of 66 crucial lipid molecules associated with 3-monochloropropane-1,2-diol were identified based on Debiased Sparse Partial Correlation analysis. 3-Monochloropropane-1,2-diol affected triglyceride hydrolyzation and increased the concentration of undigested sn-2 palmitate (9.57 to 17.06 mg kg-1). 3-Monochloropropane-1,2-diol reduced the bioaccessibility of fatty acids and more short- (31.42 to 58.02 mg kg-1) and medium-chain fatty acids (17.03 to 26.43 mg kg-1) remained unabsorbed. Lipidomics profiles of infant formula models spiked with different 3-MCPDE levels were investigated and the results were consistent with the experiments with the commercial formula indicating lipid alteration was mainly affected by the digestive 3-MCPD. The formation of 3-monochloropropane-1,2-diol ester-pancreatic lipase with the binding energy of -4.9 kcal mol-1 was more stable than triglyceride-pancreatic lipase (-4.0 kcal mol-1), affecting triglyceride hydrolyzation. 3-Monochloropropane-1,2-diol was bound to Glu13 and Asp331 residues of the pancreatic lipase via hydrogen bonds, which resulted in a conformational change of pancreatic lipase and spatial shielding effect. The existence of the spatial shielding effect reduced the accessibility of pancreatic lipase and further affected triglyceride hydrolyzation. These findings indicated that 3-monochloropropane-1,2-diol obstructed nutrient acquisition and laid the foundation for the subsequent nutrition enhancement design.
DOI: 10.17632/z4p8tj4jxv.1
title: Prolonged inhibition of CaMKII results in hyperexcitability by increasing NaV1.2 expression and its interaction with CaM

description: Dysfunction of calcium/calmodulin (CaM)-dependent kinase II (CaMKII) has been involved in hyperexcitability-related disorders including epilepsy. However, the exact mechanism by which CaMKII inhibits neuronal excitability remains to be elucidated. In the present study, we found that seizure-like events recorded by EEG in both wild-type and genetic epilepsy model rats were markedly augmented in response to the prolonged inhibition of CaMKII, indicating that the inactivation of CaMKII enhanced the neuronal excitability. Electrophysiological recording showed that CaMKII inhibition induced hyperexcitability of cultured hippocampal neurons and potentiation of neuronal activity in induced pluripotent stem cell (iPSC)-derived cortical neurons. We further revealed that CaMKII inhibition enhanced the persistent slow inactivating sodium current (INaP) of hippocampal neurons, which was attributed to increased neuronal expression of the voltage-gated sodium channel NaV1.2. Our findings suggest that NaV1.2 expression was transcriptionally upregulated by the negative regulator nuclear receptor subfamily 4 group A member 2 (NR4A2). Furthermore, CaMKII inhibition induced interaction between NaV1.2 and CaM through immunoprecipitation assay. Intriguingly, a peptide that antagonized the binding of CaM to the IQ domain of NaV1.2 prevented neuronal hyperexcitability induced by CaMKII inhibition in vivo and in vitro. Altogether, we unveil that prolonged CaMKII inhibition leads to hyperexcitability through increasing the expression of NaV1.2 and its association with CaM. Thus, our study uncovers a novel signaling mechanism by which CaMKII maintains to appropriate neuronal excitability.
DOI: 10.17632/45dzm7mgsp.2
title: Data for: Competitive and Cooperative Effects of Chloride on Palladium(II) Adsorption to Iron (Oxyhydr)oxides: Implications for Mobility During Weathering

description: Data package for manuscript "Competitive and Cooperative Effects of Chloride on Palladium(II) Adsorption to Iron (Oxyhydr)oxides: Implications for Mobility During Weathering" by Emily G. Wright, Xicheng He, Elaine D. Flynn, Daniel E. Giammar, and Jeffrey G. Catalano. The manuscript will be submitted to Geochimica et Cosmochimica Acta. This dataset contains adsorption results from experiments designed to investigate the effect of chloride on Pd(II) adsorption to hematite and 2-line ferrihydrite. This includes lab experiments reacting suspensions of the minerals with various amounts of Pd and chloride at pH 4. We also characterized adsorbed Pd with X-ray absorption fine structure spectroscopy.

The file "Wright2024_PdAds_data.csv" contains the target starting Pd concentration (uM), final aqueous Pd and associated error (in uM), calculated adsorbed Pd and associated error (in umol/m2), aqueous chloride (mM), final pH, mineral concentration/loading (in g/L), and the calculated activity of the Pd++ aqueous species (not calculated for pH 3 samples or mineral free controls). Associated mineral-free controls (mineral loading = 0 g/L) are included; the aqueous Pd error was not calculated. These data appear in Figures 1, 2, 4, 7, S2, S3, S8, and S9 and Tables 1 and S2 in the associated manuscript.

The file "Wright2024_MineralBatches_data.csv" contains the mineral identity and BET specific surface area (in m2/g) for every mineral batch used in experiments. These data appear in Table S1 in the associated manuscript.

The file "Wright2024_XRD_data.csv" contains the powder X-ray diffraction patterns of synthesized batches of hematite and 2-line ferrihydrite. Labels starting with "H" were hematite samples; labels starting with "F" were 2-line ferrihydrite samples. Note that the data were collected under variable conditions that are detailed in the manuscript. These data appear in Figure S1 in the associated manuscript.

The file "Wright 2024_ZetaPotential_data.csv" contains the measured zeta potentials for samples of hematite (batch H4) and ferrihydrite (batch F2) at pH 4 in the presence of varying amounts of sodium chloride. Chloride was not measured in these samples. These data appear in Table 2 in the associated manuscript.

The file "Wright2024_XAFSSamples_data.csv" contains the specific mineral batch, measured final aqueous Pd (in uM), measured final aqueous chloride (in mM), and estimated adsorbed Pd (in umol/m2) of all XAFS samples. These data appear in Tables 3 and S4 in the associated manuscript.

The file "Wright2024_XAFS_data.csv" contains the normalized XAFS spectra of samples of Pd adsorbed to hematite and 2-line ferrihydrite at varying chloride concentrations, as well as reference materials PdO and PdCl2. See "Wright2024_XAFSSamples_data.csv" for a guide to sample names for experimental samples. H05h is equivalent to H0.5h and F05h is equivalent to F0.5h. These data appear in Figures 5, S4, S5, and S6 in the associated manuscript.
DOI: 10.17632/fs5v44wdz2.1
title: LINF_280008900

description: Zinc finger containing protein | Bcd1-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/by5tzcp9sj.2
title: Reducing alertness does not affect line bisection bias in neurotypical participants

description: This is a set of .csv data files as well as R analysis code for the project stated in the title. Participants were required to bisect 32 horizontal lines of varying size and shape (see McIntosh et al., 2005; 2017) on a computer screen using their mouse. This was done with and without spatial cues (shortly displayed, red, vertical lines at one end of the horizontal line), followed by a vigilance task, followed by the line bisection task again. The vigilance task was a 50-minute task in which a horizontal line moved up and down randomly; whenever it reached a certain threshold (i.e., it crossed a static horizontal line in the top half of the screen), participants were meant to push the space bar as quickly as possible. On average, participants' reaction times decreased over the vigilance task, suggesting a reduction in alertness. Similarly, for about half the sample this reduction was also indicated by the Stanford Sleepiness Scale. For the other half of the sample, no such data could be used, as the Stanford Sleepiness Scale was translated incorrectly. While the reduction in alertness did not have an effect on a measure of spatial attention (endpoint weightings bias, EWB), it did show an effect on a measure of general attention, endpoint weightings sum (EWS). McInt_Vig_04-20.csv and McInt_Vig_cue_04-20.csv contain, for each participant, all bisection measures derived without cues and with cues, respectively. McInt_Vig_vig.csv contains the reaction times of participants to the vigilance task.

Edit: Added raw data
DOI: 10.17632/by5tzcp9sj.1
title: Reducing alertness does not affect line bisection bias in neurotypical participants

description: This is a set of .csv data files as well as R analysis code for the project stated in the title. Participants were required to bisect 32 horizontal lines of varying size and shape (see McIntosh et al., 2005; 2017) on a computer screen using their mouse. This was done with and without spatial cues (shortly displayed, red, vertical lines at one end of the horizontal line), followed by a vigilance task, followed by the line bisection task again. The vigilance task was a 50-minute task in which a horizontal line moved up and down randomly; whenever it reached a certain threshold (i.e., it crossed a static horizontal line in the top half of the screen), participants were meant to push the space bar as quickly as possible. On average, participants' reaction times decreased over the vigilance task, suggesting a reduction in alertness. Similarly, for about half the sample this reduction was also indicated by the Stanford Sleepiness Scale. For the other half of the sample, no such data could be used, as the Stanford Sleepiness Scale was translated incorrectly. While the reduction in alertness did not have an effect on a measure of spatial attention (endpoint weightings bias, EWB), it did show an effect on a measure of general attention, endpoint weightings sum (EWS). McInt_Vig_04-20.csv and McInt_Vig_cue_04-20.csv contain, for each participant, all bisection measures derived without cues and with cues, respectively. McInt_Vig_vig.csv contains the reaction times of participants to the vigilance task.
DOI: 10.17632/797t9r4k7n.2
title: Influences of Religiosity on Guilt Coping in a Situation of Moral Consumption

description: All the raw and modified data from the survey, conducted as a part of the dissertation developed by Max Murtinho under the supervision of André Urdan.
DOI: 10.17632/797t9r4k7n.1
title: Influences of Religiosity on Guilt Coping in a Situation of Moral Consumption

description: All the raw and modified data from the survey.
DOI: 10.17632/4mxj6rpv48.1
title: Facial Profile Soft Tissue Annotations for Orthodontic Diagnosis and Classification

description: This dataset consists of 400 annotated facial soft tissue profile images curated for orthodontic research and deep learning model development. The images were annotated using the WebCeph tool, focusing on soft tissue landmarks such as the lips, nose, chin, and jawline. Additionally, the annotations include detailed skeletal and dental measurements, all validated by orthodontic specialists to ensure clinical relevance and precision.

Each CSV file includes comprehensive patient data with the following fields:

patients: Patient identifier (anonymized).
skeletal_status: General skeletal classification.
skeletal_maxilla: Skeletal condition of the maxilla.
skeletal_mandible: Skeletal condition of the mandible.
dental_status: Overall dental status of the patient.
dental_overjet: Measurement of the overjet.
dental_overbite: Measurement of the overbite.
dental_upper_incisor_inclination: Inclination of the upper incisors.
dental_lower_incisor_inclination: Inclination of the lower incisors.
dental_interincisal_angle: Angle between the upper and lower incisors.
dental_upper_incisal_display: Display of the upper incisors.
soft-tissue_upper_lip: Soft tissue condition of the upper lip.
soft-tissue_lower_lip: Soft tissue condition of the lower lip.
The dataset provides five classification categories for the soft tissue profiles: Plane, Concave, Convex, Convex-Concave, and Concave-Convex. This classification assists in understanding soft tissue structure and planning appropriate orthodontic treatments. The CSV files contain detailed annotations for each patient, enabling research into the relationships between skeletal, dental, and soft tissue characteristics.

This dataset is well-suited for developing deep learning models, such as convolutional neural networks (CNNs), to improve the accuracy and efficiency of orthodontic diagnosis and treatment planning.

Key Features:
Images: 400 high-quality profile images of patients’ facial soft tissues.
Annotations: Comprehensive skeletal, dental, and soft tissue annotations provided in CSV format, using the WebCeph tool.
Classes: Five classification categories for soft tissue profiles:
Plane
Concave
Convex
Convex-Concave
Concave-Convex
Format: Images in JPEG/PNG format, annotations in CSV format.
Validation: All annotations validated by orthodontic specialists for clinical accuracy.
Application: Orthodontic research, deep learning model development, AI-based diagnostics.
Use Case: Ideal for training machine learning models for enhanced diagnosis and treatment planning in orthodontics, focusing on the relationships between skeletal, dental, and soft tissue profiles.
Intended Audience:
This dataset is designed for researchers, data scientists, and developers working in orthodontics, artificial intelligence, and medical imaging. It offers a valuable resource for advancing research in AI-powered diagnostic tools and soft tissue analysis in orthodontics.