cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/qdc5rl
title: The intertidal genus Indopacifica (Acari, Oribatida, Selenoribatidae): new species juvenile morphology and distribution

description: This dataset contains the digitized treatments in Plazi based on the original journal article Resch, Bettina, Baumann, Julia, Pfingstl, Tobias (2019): The intertidal genus Indopacifica (Acari, Oribatida, Selenoribatidae): new species juvenile morphology and distribution. Zootaxa 4647 (1): 322-335, DOI: https://doi.org/10.11646/zootaxa.4647.1.19
DOI: 10.18739/a2kk94c28
title: Model output and code assessing mechanisms of projected 21st century ocean warming around Greenland, 2015-2019

description: This project assessed: (1.) observed and projected mechanisms driving change in large-scale North Atlantic heat content; (2.) sea surface temperature and ocean heat content variability and its relation to surface fluxes in observations and climate models; (3.) the role of Greenland ice sheet mass balance on the large-scale ocean circulation. Findings have been used to drive climate model evaluation efforts and development of methods for sea level projections from the Greenland and Antarctic ice sheets, as part of the Ice Sheet Model Intercomparison Project (ISMIP6) for Coupled Model Intercomparison Project (CMIP6). The set of sea level projections that will result from ISMIP6 will provide policy-relevant information to planners and policy-makers seeking to minimize the adverse consequences to people affected by sea-level change, and set the stage for improved projections from future climate model ensembles. This dataset contains links to all data sources and selected code used in course of this project. It is expected to evolve as the results of the ISMIP6 project are published and archived.
DOI: 10.5281/zenodo.3417207
title: tvb-data - Extended Dataset - Release 1.5.9

description: Various demonstration datasets for use with The Virtual Brain project are provided here. Here you will find: compatible file/folder structures that can be uploaded through the web interface of TVB. For this usage scenario, you should just download, and unzip the current package. Independently, download TVB_Distribution from https://www.thevirtualbrain.org/ and from its web GUI upload files from this unzipped folder, at need. the default datasets used when working in <code>console</code> or library mode. For this usage scenario, you should download, unzip, and install in your python distribution this tvb-data as a regular python package. More information on TVB documentation site: http://docs.thevirtualbrain.org/ or on the main webpage of the project https://www.thevirtualbrain.org/
description: {"references": ["Paula Sanz Leon, Stuart A. Knock, M. Marmaduke Woodman, Lia Domide, Jochen Mersmann, Anthony R. McIntosh, Viktor Jirsa (2013) The Virtual Brain: a simulator of primate brain network dynamics. Frontiers in Neuroinformatics (7:10. doi: 10.3389/fninf.2013.00010)"]}
DOI: 10.6073/pasta/90b50a2546d5bfafd56adfbed0ee8d8b
title: MCR LTER: Coral Reef: Ocean Currents and Biogeochemistry: salinity, temperature and current at CTD and ADCP mooring FOR04 from 2004 ongoing

description: Moored and bottom mounted instrumentation (ADCP, CTD, thermistors, wave-tide meters) sampled year-round on the reef of Moorea Island, French Polynesia at site FOR04. Sampling began in 2005. All data have been interpolated onto a 20 min grid. ADCP data are orgainized into 1-meter bins, measured as height from the bottom, to a maximum of 20 bins. All bins may not be filled, and although post processing attempted to exclude data from bins 'above the surface', users need to exercise caution with the near surface bins. CTD parameters include Pressure, Temperature, Conductivity, Salinity and Density. The two moored CTD packages are located approximately 5 and 14 meters above the bottom, and there are up to 5 additional temperature thermistors spaced vertically along the mooring line and 2 bottom mounted thermistors in the vicinity of the mooring at 10 and 20 meter depth. A bottom mounted wave-tide meter provides a measure of significant wave height and dominant wave period at a 2 hour sampling interval. Tide related data may be calculated from bottom-mounted pressure sensor data. This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 16-37396 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2018). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.
DOI: 10.15468/odyrrz
title: Two new species of Achipteriidae (Acari, Oribatida) from China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ren, Guoru, Yang, Maofa, Liang, Wenqin, Zheng, Qianfen (2019): Two new species of Achipteriidae (Acari, Oribatida) from China. Zootaxa 4647 (1): 336-347, DOI: https://doi.org/10.11646/zootaxa.4647.1.20
DOI: 10.25387/g3.8288591
title: Supplemental Material for Königer, Arif, and Grath, 2019

description: Supplementary tables with information on protein-coding genes within the identified quantitative trait loci (QTL1, QTL2, QTL3).<br><br>
DOI: 10.25387/g3.8288591.v1
title: Supplemental Material for Königer, Arif, and Grath, 2019

description: Supplementary tables with information on protein-coding genes within the identified quantitative trait loci (QTL1, QTL2, QTL3).<br><br>
DOI: 10.15468/fmrerg
title: Description of a new Pergalumna (Acari: Oribatida: Galumnidae) species from Mexico and its postembryonic development

description: This dataset contains the digitized treatments in Plazi based on the original journal article Páez, Jair, Villagomez, Fernando, Palacios-Vargas, Jóse G. (2019): Description of a new Pergalumna (Acari: Oribatida: Galumnidae) species from Mexico and its postembryonic development. Zootaxa 4647 (1): 385-406, DOI: https://doi.org/10.11646/zootaxa.4647.1.25
DOI: 10.5281/zenodo.3415223
title: Social contact data for Russia

description: Social contact data for Russia. Dataset prepared by Thang Hoang (University of Hasselt); original dataset available at this link.
DOI: 10.25345/c5tt07
title: MassIVE MSV000084328 - Integrative proteomics and pharmacogenomics analysis of methylphenidate treatment response
title: Transcriptomics and candidate gene/protein expression studies have indicated several biological processes modulated by methylphenidate (MPH), widely used in attention-deficit/hyperactivity disorder (ADHD) treatment. However, the lack of a differential proteomic profiling of MPH treatment limits the understanding of the most relevant mechanisms by which MPH exerts its pharmacological effects at the molecular level. Therefore, our aim is to investigate the MPH-induced proteomic alterations using an experimental design integrated with a pharmacogenomic analysis in a translational perspective. Proteomic analysis was performed using the cortices of Wistar-Kyoto rats, which were treated with MPH or saline for two weeks. After functional enrichment analysis of the differentially expressed proteins in rats, the significant biological pathways were tested for association with MPH response in adults with ADHD using genome-wide data. In total, 98 proteins were differentially expressed following MPH treatment in rats (86 downregulated and 12 upregulated). The functional enrichment analysis revealed 28 significant biological pathways (gene-sets) modulated by MPH, including some with recognized biological plausibility, such as those related to synaptic vesicle-mediated transmission. The pharmacogenomic analysis considering these gene-sets reinforced the influence of synaptic neurotransmission processes on MPH treatment response. Our results, that integrate proteomics and pharmacogenomics, revealed putative molecular effects of MPH, and extended the results involving the synaptic transmission to a clinical sample, shedding light on the molecular signatures of MPH effects and the possible biological sources of treatment response variability
DOI: 10.5281/zenodo.3363986
title: OccuTherm: Occupant Thermal Comfort Inference using Body Shape Information

description: <strong>OccuTherm: Occupant Thermal Comfort Inference using Body Shape Information</strong> This repository contains the official data from a USDOE-funded project at Carnegie Mellon University and Bosch Research Pittsburgh. The primary goal of the project was to investigate the relationship between indoor commercial building occupant thermal comfort and various biometric and environmental predictors. We performed 77 individual comfort experiments, approved by our Institutional Review Board (IRB) and in satisfaction of participant consent guidelines. Our goal was to generate a dataset than enables comprehensive study of human thermal comfort preferences, in a commercial building environment, across a wide range of indoor environmental conditions. The data is comprised of the following feature groups: depth camera frames, biometrics sensor data, body shape information, subjective comfort data from the mobile device application, environmental sensor data from the commercial building HVAC system, and outdoor weather station data. This is the official dataset release for the following conference paper: Jonathan Francis*, Matias Quintana*, Nadine von Frankenberg, Sirajum Munir, and Mario Bergés. 2019. OccuTherm: Occupant Thermal Comfort Inference using Body Shape Information. In BuildSys '19: ACM International Conference on Systems for Energy-Efficient Buildings, Cities, and Transportation, November 13–14, 2019, New York, NY. ACM, New York, NY, USA, 10 pages. To use this dataset, first download <strong>all</strong> the files. Next, issue the following commands on, e.g., Linux terminal: <pre><code class="language-bash">&gt;$ cd /path/to/dataset/files &gt;$ cat occutherm_dataset_v0-0-0.tar.gza* &gt; archive.tar.gz &gt;$ tar -xvzf archive.tar.gz</code></pre> Modeling and mobile application code are available in our project repository: https://github.com/jonfranc/occutherm If you find the repository or the dataset useful, please cite our paper: <pre><code>@inproceedings{francis_buildsys2019, author = {Francis, Jonathan and Quintana, Matias and von Frankenberg, Nadine and Munir, Sirajum and Berges, Mario}, title = {OccuTherm: Occupant Thermal Comfort Inference using Body Shape Information}, booktitle = {Proceedings of the 6th International Conference on Systems for Energy-Efficient Buildings, Cities, and Transportation}, series = {BuildSys '19}, year = {2019}, isbn = {978-1-4503-7005-9/19/11}, location = {New York, NY}, numpages = {10}, acmid = {3360858}, publisher = {ACM}, address = {New York, NY, USA}, keywords = {Thermal Comfort, Human Studies, Machine Learning}, }</code></pre>
DOI: 10.5281/zenodo.3415222
title: Social contact data for Russia

description: Social contact data for Russia. Dataset prepared by Thang Hoang (University of Hasselt); original dataset available at this link.
DOI: 10.15468/qb1yq1
title: Naiadacarus sidorchukae sp. n. (Acariformes: Acaridae) from Western Siberia closely related to a North American species, with a new generic synonymy

description: This dataset contains the digitized treatments in Plazi based on the original journal article Klimov, Pavel B., Oconnor, Barry, Khaustov, Alexander A. (2019): Naiadacarus sidorchukae sp. n. (Acariformes: Acaridae) from Western Siberia closely related to a North American species, with a new generic synonymy. Zootaxa 4647 (1): 441-456, DOI: https://doi.org/10.11646/zootaxa.4647.1.28
DOI: 10.5519/qd.69ghq9rc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.6073/pasta/d8b229b574c727dcf19d63bb350b5d71
title: MCR LTER: Coral Reef: Ocean Currents and Biogeochemistry: salinity, temperature and current at CTD and ADCP mooring FOR05 from 2005 ongoing

description: Moored and bottom mounted instrumentation (ADCP, CTD, thermistors, wave-tide meters) sampled year-round on the reef of Moorea Island, French Polynesia at site FOR05. Sampling began in 2005. All data have been interpolated onto a 20 min grid. ADCP data are orgainized into 1-meter bins, measured as height from the bottom, to a maximum of 20 bins. All bins may not be filled, and although post processing attempted to exclude data from bins 'above the surface', users need to exercise caution with the near surface bins. CTD parameters include Pressure, Temperature, Conductivity, Salinity and Density. The two moored CTD packages are located approximately 5 and 14 meters above the bottom, and there are up to 5 additional temperature thermistors spaced vertically along the mooring line and 2 bottom mounted thermistors in the vicinity of the mooring at 10 and 20 meter depth. A bottom mounted wave-tide meter provides a measure of significant wave height and dominant wave period at a 2 hour sampling interval. Tide related data may be calculated from bottom-mounted pressure sensor data. This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 16-37396 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2018). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.
DOI: 10.5281/zenodo.3422348
title: DWD European Weather 2

description: opendata.dwd.de - OpenData by Deutscher Wetter Dienst Conditions: https://www.dwd.de/EN/service/copyright/copyright_node.html dates and times are UTC.
DOI: 10.14457/cu.the.2009.1953
title: Accelerating the solving process of optimal layout design using genetic algorithm

description: The layout design optimization is a complicated process of an architectural design which is concerned with finding feasible locations and size of rooms that meet design requirement and design preference. This paper formulates the optimal layout design as multi-objective mixed integer programming model using the binary variables and branch & bound technique to determine the best location and size of a group of interrelated rectangular rooms by placing a representative point at the center of the room. Although solving the layout problems using MIP model is easy to formulate and adapt for meeting architectural requirements, the number of iterations to find the optimal solution is still influenced by the number of rooms. For this reason, we decrease the number of iterations by accelerating branch and bound process. The genetic algorithm has been adopted to find a candidate sequence of branching variables which helps reducing the search tree. From the empirical test, we found that the iterations can be reduced significantly.
DOI: 10.14457/cu.the.2009.1954
title: The effects of recombinant bovine somatotropin and misty-fan cooling system on milk production relating to renal function in regulation of body fluids in crossbred holstein cattle

description: Twenty, primiparous, 87.5% crossbred Holstein cows were used to evaluate the effect of supplemental recombinant bovine somatotropin (rbST) and mister-fan cooling on milk production and hormonal responses relating to renal function in regulation of body fluids at early, mid and late lactation. Animals in each experiment were divided into two groups. Cows in the first group were housing in the barn under normal shade (NS) as non-cooled cows and cows in the second group were housing under normal shade plus misty-fan cooling system (MF) as cooled cows. Cows in both groups were received subcutaneous injections of 500 mg of rbST every 2 wks three times in each stage of lactation. The results showed that the averaged temperature humidity index (THI) in both NS and MF barns were from 80 to 84, but the rectal temperature (RT) and respiration rate (RR) of cooled cows were lower than those of non-cooled cows. The milk yield, DMI and water intake of cooled cows without rbST had tendency to higher than non-cooled cows. Cows treated with rbST were significantly higher in milk yield, mammary blood flow (MBF), body fluids, dry matter intake (DMI), water intake, rectal temperature (RT) and respiration rate (RR) than the pretreated period in each stage of lactation . During supplemental rbST in both cooled and non-cooled cows, a marked increase in plasma insulin like growth factor (IGF-I) coincided with an increase in the plasma aldosterone level, while there were no changes in plasma cortisol and vasopressin concentrations in all stages of lactation. The plasma thyroxine (T4) concentration was significantly decreased during early lactation. The study of renal function in both cooled and non-cooled cows whether supplemental rbST or not showed no significant changes in renal hemodynamics. There were decreases in the rate of urine flow, urinary electrolytes excretion and osmolar clearance in both cooled and non-cooled cows supplementation with rbST. The lithium clearance study revealed the increases in water and sodium reabsorption in renal proximal tubule. These data can conclude that rbST supplementation is main action to increase milk production which is mediated primarily through higher body fluid and secondary increased MBF to mammary gland for distribution of nutrients for milk synthesis. The stimulatory effects of rbST on body fluid expansion could be in part stimulate sodium and water reabsorption in renal proximal tubule by mediated via increases in plasma levels of aldosterone and IGF-1 which may involve a stimulation of renin–angiotensin–aldosterone (RAAS) system, but not for vasopressin.
DOI: 10.14457/cu.the.2009.1955
title: Preparation of TiO₂ layer for dye-sensitized solar cells

description: The suitable conditions for the formation of TiO₂ layer by spray coating technique were investigated for the application of dye-sensitized solar cell. TiO₂ layers were prepared by spray coating technique on 3x3 cm2 ZnO(Al)/SLG substrates. The TiO₂ colloidal solution was prepared from ground TiO₂ powder in acetylacetone and deionized water. The TiO₂ colloidal solution was sprayed on ZnO(Al)/SLG substrate consisting of a very thin sputtered TiO₂ blocking layer. The substrates used in this work were spun at 1800 rpm prior to spraying at room temperature. The as-grown TiO₂ samples were annealed at 450ºC for 1 hour in atmosphere. The characterization tools such as XRD, UV-VIS spectrometer and AFM were used to verify the deposited TiO₂ films for its structural, optical and surface properties, respectively. The counter electrode for the dye-sensitized solar cells in this work was prepared from the electrochemical deposition of Pt on the ZnO(Al)/SLG substrate. The ruthenium 535 bis-TBA dye was used as the sensitizer. The photo-to-current conversion efficiency of the cells was characterized under standard AM 1.5 radiation (100 mW/cm²). The highest efficiency of DSSC was prepared from the TiO₂-blocking-layer (thick ~25 nm), thickness of TiO₂ layer ~13 μm and Degussa TiO₂ P25 which value short circuit current density (Jsc) of approximately 0.368 mA/cm2, open-circuit voltage (Voc) of approximately 730 mV, Fill Factor (FF) 0.59 and efficiency (η) of approximately 0.158%.
DOI: 10.5281/zenodo.3418684
title: Density survey of apex predators, their main prey and human disturbance in the eastern Central African Republic

description: Summary of all density estimates as described in Aebischer et al. 2020, Biological Conservation.
DOI: 10.5281/zenodo.3418685
title: Density survey of apex predators, their main prey and human disturbance in the eastern Central African Republic

description: Summary of all density estimates as described in Aebischer et al. 2020, Biological Conservation.
DOI: 10.7910/dvn/r4reow/gr74je
title: DTA199.file0847.M455.PDF

description: Codebook (PDF). For all parts.
DOI: 10.7910/dvn/r4reow/yrdj5u
title: DTA886.file0025.D096.DAT

description: Pilot I Data - Essex Version. Raw data in text format.
DOI: 10.14457/cu.the.2009.1956
title: An independent software for IMRT dose verification in CT-based patient data

description: The patient specific dose verification is necessary process in advanced radiation therapy. In this study, the independent software (ISOFT) was developed to calculate absolute dose from 3 dimensional conformal radiation therapy (3D-CRT) and intensity modulated radiation therapy (IMRT) field in CIRS thorax phantom by combining modified Clarkson integration with 3D beam subtraction method (3D-BSM). The overall of percent deviation of point dose between measured by ion chamber and calculated by ISOFT and Eclipse system for square, rectangular and shaped MLC field at 1.5 to 15 cm depths in homogeneous phantom was within 2%. For the verification of 3D-CRT and IMRT plans, the doses from ISOFT and Eclipse system were compared with ion chamber and EDR2 film in CIRS thorax phantom. The measured lung dose presented mostly the lower dose than calculated by ISOFT and Eclipse system. The percent deviation between measurement and ISOFT was within 5% which reached the acceptable criteria. So ISOFT can be used as an independent software to verify absolute dose of 3D-CRT and IMRT field in inhomogeneous medium for CT base patient data. The correction of external body contour was included. The limitation of ISOFT was the only one field can be applied at 90 degree gantry angle. The build up doses at the surface and interface could not be determined correctly.
DOI: 10.14457/cu.the.2009.1957
title: Effects of Antidesma acidum crude extract on oxidative stress in cats with spontaneous chronic renal failure

description: The effects of crude extract of Antidesma acidum in cats with spontaneous chronic renal failure were performed. Thirty cats were assigned into 3 groups accordings to the International Renal Interest Society, 10 cats in the clinically normal group (creatinine levels &lt; 1.6 mg/dl), 10 cats in the mild azotemia group (creatinine levels 1.6-2.8 mg/dl) and 0 cats in the moderate azotemia group (creatinine levels 2.9-5.0 mg/dl). Each group was randomly divided into 2 subgroups: subgroup 1 received placebo and subgroup 2 received the crude extract of Antidesma acidum 120 mg/kg per oral, once daily for 56 days. Blood collection was performed every 2 weeks for 10 consecutive weeks. Blood hematology was determined. The blood chemistries were analyzed for blood urea nitrogen (BUN), creatinine, alanine aminotransferase (ALT) and alkaline phosphatase (ALP). The oxidative stress markers were tested using blood reduced glutathione (GSH), blood oxidizing glutathione (GSSG) and the erythrocyte glutathione peroxidase (Gpx) activity. Teh results demonstrated that the moderate azotemia cats received the crude extract of Antidesma acidum had significantly decrease in ALT levels (day 42, 56 and 70), ALP levels (day 56 and 70) and creatinine levels (day 28 and 42). The mild and moderate azotemia cats received the crude extract of Antidesma acidum had the trend to increase in GSH levels (day 56). In conclusion, the crude extract of Antidesma acidum significantly decreased ALT, ALP, creatinine levels and inhibited the glutathione depletion. The exact mechanisms of how the crude extract of Antidesma acidum effects on the oxidative stress in cats with moderate azotemia remains to be investigated.
DOI: 10.7910/dvn/q6bo6q/gmlafg
title: 1.4. Installation Cost.tab

description: :unav
DOI: 10.7910/dvn/q6bo6q/guxhny
title: 1.2. Harvest Cost.tab

description: :unav
DOI: 10.7910/dvn/q6bo6q/kcicoz
title: 2. CodeBook.xls

description: :unav
DOI: 10.7910/dvn/q6bo6q/kzus00
title: 1.1. Main Data.tab

description: :unav
DOI: 10.7910/dvn/q6bo6q/ua6eru
title: 1.3. Maintenance Cost.tab

description: :unav
DOI: 10.7910/dvn/r4reow/6nenmi
title: DTA886.file0030.O656.DAT

description: Phase I, Questionnaire Data - Essex Version Raw data in text format.
DOI: 10.7910/dvn/r4reow/b4bjyc
title: DTA886.file0029.O240.DAT

description: Phase I Data, Census File - Essex Version Raw data in text format.