cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6656045
title: Dataset for the clostyper software

description: Clostyper is a Snakemake-based tool designed to automate the analysis process of Clostridial genomes in a highly customizable manner, tailoring tasks to clinically relevant species. Detailed information about Clostyper, including its development rationale, available analyses, installation guidelines and usage instructions is provided: https://gitlab.com/FLI_Bioinfo/clostyper. This repository contains several Illumina FASTQ files and a reference genome which can be used to check whether Clostyper has been successfully installed and configured.
DOI: 10.5281/zenodo.14859379
title: Dataset for clostyper

description: Clostyper is a Snakemake-based tool designed to automate the analysis process of Clostridia genomes. Detailed information about Clostyper, including its development rationale, available analyses, installation guidelines and usage instructions is provided: https://gitlab.com/FLI_Bioinfo/clostyper. 

This repository contains the Clostyper database
DOI: 10.5281/zenodo.6656044
title: Dataset for clostyper

description: Clostyper is a Snakemake-based tool designed to automate the analysis process of Clostridia genomes. Detailed information about Clostyper, including its development rationale, available analyses, installation guidelines and usage instructions is provided: https://gitlab.com/FLI_Bioinfo/clostyper. 

This repository contains the Clostyper database
DOI: 10.15468/dl.ffcfwd
title: Occurrence Download

description: A dataset containing 1162 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["3187799"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 1162 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025405-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m6hfbh
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["8075816"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 57 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025404-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ehqxzb
title: Occurrence Download

description: A dataset containing 2851 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["8373355"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 2851 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025403-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5cnkjf
title: Occurrence Download

description: A dataset containing 120713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phalacrocorax carbo (Linnaeus, 1758)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 120713 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025362-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4xadk
title: Occurrence Download

description: A dataset containing 718 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cryptobranchus alleganiensis (Sonnini de Manoncourt & Latreille, 1801)",
 "Year 1900-2025"
 ]
}

 The dataset includes 718 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025406-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14859480
title: GNSS L1 Jammed Signal 10MHz Recording - Triangular (Part 2)

description: These gzip files contain I-Q data dumps of Jammed GNSS signal with the following characteristics:GNSS Band: L1Sample frequency: 10 MHzJamming signal: TriangularJamming power: 60, 55

This project has received funding from the European Union’s Horizon Europe Research and Innovation Programme under the Grant Agreement No. 101073909.
DOI: 10.5281/zenodo.14859481
title: GNSS L1 Jammed Signal 10MHz Recording - Triangular (Part 2)

description: These gzip files contain I-Q data dumps of Jammed GNSS signal with the following characteristics:GNSS Band: L1Sample frequency: 10 MHzJamming signal: TriangularJamming power: 60, 55

This project has received funding from the European Union’s Horizon Europe Research and Innovation Programme under the Grant Agreement No. 101073909.
DOI: 10.15468/dl.3pp8fw
title: Occurrence Download

description: A dataset containing 3911 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["2706301"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 3911 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025407-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2putqx
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["5635657"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025409-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.32e2xn
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["4939951"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 30 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025408-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u589w6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelecanus carbo Linnaeus, 1758",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025410-250127130748423/datasets/export for details.
DOI: 10.6084/m9.figshare.25659063
title: Supplementary Table 2

description: Annotation of BME/CTVM6 Trinity genes. Incorporated annotation results combined BLAST searches (Trinotate), ortholog searches (EggNOG) and protein domain searches (InterProScan).
DOI: 10.6084/m9.figshare.25659063.v1
title: Supplementary Table 2

description: Table with our Differential Gene expression, transcriptomics data frrom BME/CTVM6 cells infected with SFTSV MOI 1 PFU/cell.
DOI: 10.6084/m9.figshare.25659063.v2
title: Supplementary Table 2

description: Annotation of BME/CTVM6 Trinity genes. Incorporated annotation results combined BLAST searches (Trinotate), ortholog searches (EggNOG) and protein domain searches (InterProScan).
DOI: 10.15468/dl.yzhqv2
title: Occurrence Download

description: A dataset containing 1384 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["3152707"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 1384 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025411-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qvjkzh
title: Occurrence Download

description: A dataset containing 948 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["5289521"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 948 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025413-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.msgvqj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phalacrocorax lucidus (Lichtenstein, 1823)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025415-250127130748423/datasets/export for details.
DOI: 10.15468/dl.qsgu55
title: Occurrence Download

description: A dataset containing 5213 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["2928978"],"matchCase":false},{"type":"in","key":"LICENSE","values":["CC0 1.0","CC-BY 4.0"],"matchCase":false},{"type":"equals","key":"MEDIA_TYPE","value":"StillImage","matchCase":false}]}

 The dataset includes 5213 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025414-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.48dp62
title: Occurrence Download

description: A dataset containing 739593 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is July",
 "OccurrenceStatus is Present",
 "TaxonKey is Picidae",
 "Year 2017-2019"
 ]
}

 The dataset includes 739593 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025386-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14859460
title: Allen Brain Atlas Whole Mouse Brain Subset

description: This is a subset of 248 genes in the Xenium Mouse Brain panel. There are approximately 4 million cells from the v2 and v3 datasets combined.
DOI: 10.5281/zenodo.14859461
title: Allen Brain Atlas Whole Mouse Brain Subset

description: This is a subset of 248 genes in the Xenium Mouse Brain panel. There are approximately 4 million cells from the v2 and v3 datasets combined.
DOI: 10.15468/dl.aek68w
title: Occurrence Download

description: A dataset containing 787636 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lupinus polyphyllus Lindl., Festuca rubra L., Achillea millefolium L., Trisetum flavescens (L.) P.Beauv., Primula veris L., Gentiana pneumonanthe L., Arnica montana L., Pulsatilla vulgaris Mill., Dactylorhiza incarnata (L.) Soó, Gymnadenia conopsea (L.) R.Br., Leontodon hispidus L., Scabiosa columbaria L., Campanula rotundifolia L., Helianthemum nummularium (L.) Mill., Leucanthemum vulgare Lam., Anthoxanthum odoratum L., Filipendula ulmaria (L.) Maxim., Ranunculus acris L., Lathyrus pratensis L., Galium verum L., Sanguisorba officinalis L., Lotus corniculatus L., Hypericum perforatum L., Orchis mascula (L.) L., Polygonum bistorta Garcke, Carlina vulgaris L.)",
 "Country is Sweden",
 "HasCoordinate is true",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 787636 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025393-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8vgyte
title: Occurrence Download

description: A dataset containing 291512 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is JODC Dataset"
 ]
}

 The dataset includes 291512 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019719-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5kfb3e
title: Occurrence Download

description: A dataset containing 291402 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is ARABEL - Arachnologia Belgica"
 ]
}

 The dataset includes 291402 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019720-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh0194697.10fu
title: SH0194697.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194698.10fu
title: SH0194698.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194699.10fu
title: SH0194699.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194700.10fu
title: SH0194700.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194701.10fu
title: SH0194701.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194702.10fu
title: SH0194702.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194703.10fu
title: SH0194703.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0194704.10fu
title: SH0194704.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.