cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8113487
title: Additional file 4: of Associations between XRCC3 Thr241Met polymorphisms and breast cancer risk: systematic-review and meta-analysis of 55 case-control studies

description: Figure S3. Forest plots of XRCC3 T241 M Polymorphism and Sporadic Breast Cancer according to NOS subgroup analysis. (A) Homozygote model: MM vs. TT. (B) Dominant model: TM + MM vs. TT. (C) Recessive model: MM vs. TM + TT. (ZIP 22 kb)
DOI: 10.6084/m9.figshare.8113487.v1
title: Additional file 4: of Associations between XRCC3 Thr241Met polymorphisms and breast cancer risk: systematic-review and meta-analysis of 55 case-control studies

description: Figure S3. Forest plots of XRCC3 T241 M Polymorphism and Sporadic Breast Cancer according to NOS subgroup analysis. (A) Homozygote model: MM vs. TT. (B) Dominant model: TM + MM vs. TT. (C) Recessive model: MM vs. TM + TT. (ZIP 22 kb)
DOI: 10.6084/m9.figshare.8113481
title: Additional file 3: of Associations between XRCC3 Thr241Met polymorphisms and breast cancer risk: systematic-review and meta-analysis of 55 case-control studies

description: Figure S2. Forest plots of XRCC3 Thr241Met polymorphism and risk of familial breast cancer in society -based subgroups. (D) Homozygote model: MM vs. TT. (E) Dominant model: TM + MM vs. TT. (F) Recessive model: MM vs. TM + TT. (ZIP 8 kb)
DOI: 10.6084/m9.figshare.8113481.v1
title: Additional file 3: of Associations between XRCC3 Thr241Met polymorphisms and breast cancer risk: systematic-review and meta-analysis of 55 case-control studies

description: Figure S2. Forest plots of XRCC3 Thr241Met polymorphism and risk of familial breast cancer in society -based subgroups. (D) Homozygote model: MM vs. TT. (E) Dominant model: TM + MM vs. TT. (F) Recessive model: MM vs. TM + TT. (ZIP 8 kb)
DOI: 10.6084/m9.figshare.8113475
title: Additional file 2: of Associations between XRCC3 Thr241Met polymorphisms and breast cancer risk: systematic-review and meta-analysis of 55 case-control studies

description: Figure S1. Forest plots of XRCC3 Thr241Met polymorphism and risk of sporadic breast cancer in Study-based subgroups. (D) Homozygote model: MM vs. TT. (E) Dominant model: TM + MM vs. TT. (F) Recessive model: MM vs. TM + TT. (ZIP 21 kb)
DOI: 10.6084/m9.figshare.8113475.v1
title: Additional file 2: of Associations between XRCC3 Thr241Met polymorphisms and breast cancer risk: systematic-review and meta-analysis of 55 case-control studies

description: Figure S1. Forest plots of XRCC3 Thr241Met polymorphism and risk of sporadic breast cancer in Study-based subgroups. (D) Homozygote model: MM vs. TT. (E) Dominant model: TM + MM vs. TT. (F) Recessive model: MM vs. TM + TT. (ZIP 21 kb)
DOI: 10.6084/m9.figshare.8113466
title: Additional file 1: of Mapping the medical outcomes study HIV health survey (MOS-HIV) to the EuroQoL 5 Dimension (EQ-5D-3â L) utility index

description: MOS-HIV to EQ-5D-3L mapping functions. (XLS 27 kb)
DOI: 10.6084/m9.figshare.8113466.v1
title: Additional file 1: of Mapping the medical outcomes study HIV health survey (MOS-HIV) to the EuroQoL 5 Dimension (EQ-5D-3â L) utility index

description: MOS-HIV to EQ-5D-3L mapping functions. (XLS 27 kb)
DOI: 10.6084/m9.figshare.8113313
title: Additional file 2: of Circular statistics meets practical limitations: a simulation-based Raoâ s spacing test for non-continuous data

description: R code for the simulation-based Rao test. (R 5 kb)
DOI: 10.6084/m9.figshare.8113313.v1
title: Additional file 2: of Circular statistics meets practical limitations: a simulation-based Raoâ s spacing test for non-continuous data

description: R code for the simulation-based Rao test. (R 5 kb)
DOI: 10.5517/ccdc.csd.cc1p241y
title: CCDC 1551179: Experimental Crystal Structure Determination

description: Related Article: Romain Gautier, Florian Massuyeau, Gabin Galnon, Michael Paris|2019|Adv.Mater.|31|1807383|doi:10.1002/adma.201807383
DOI: 10.6084/m9.figshare.8113286
title: Emerging trends in contraceptive use, transitions and preferences among Female Sex Workers screened for an HIV prevention clinical trial in Kisumu, Kenya

description: This excel spreadsheet contains the raw data underlying analysis and results for this manuscript. The variables are clearly marked at the column headers while legends have been included to clarify any abbreviations.
DOI: 10.6084/m9.figshare.8113286.v1
title: Emerging trends in contraceptive use, transitions and preferences among Female Sex Workers screened for an HIV prevention clinical trial in Kisumu, Kenya

description: This excel spreadsheet contains the raw data underlying analysis and results for this manuscript. The variables are clearly marked at the column headers while legends have been included to clarify any abbreviations.
DOI: 10.6084/m9.figshare.8113268
title: Uploaded data file from Coral degradation alters predator odour signatures and influences prey learning and survival

description: Habitat degradation is a key factor leading to the global loss of biodiversity. This problem is particularly acute in coral reef ecosystems. We investigated whether recognition of predator odours by damselfish was influenced by coral degradation and whether these changes altered survival in the wild. We taught whitespot damselfish to recognize the odour of a predator in the presence of live/healthy coral or dead/degraded coral. Fish were tested for a response to predator odours in environments that matched their conditioning environment or in environments that were mismatched. Next, we taught blue damselfish to recognize the odour of three common reef predators in live and degraded coral environments and then stocked them onto live or degraded patch reefs, where we monitored their subsequent response to predator odour along with their survival. Damselfish learned to recognize predator odours in both coral environments, but the intensity of their antipredator response was much greater when the conditioning and test environments matched. Fish released on degraded coral had about 50% higher survival if they had been trained in the presence of degraded coral rather than live coral. Altering the intensity of antipredator responses could have rather profound consequences on population growth.
DOI: 10.6084/m9.figshare.8113268.v1
title: Uploaded data file from Coral degradation alters predator odour signatures and influences prey learning and survival

description: Habitat degradation is a key factor leading to the global loss of biodiversity. This problem is particularly acute in coral reef ecosystems. We investigated whether recognition of predator odours by damselfish was influenced by coral degradation and whether these changes altered survival in the wild. We taught whitespot damselfish to recognize the odour of a predator in the presence of live/healthy coral or dead/degraded coral. Fish were tested for a response to predator odours in environments that matched their conditioning environment or in environments that were mismatched. Next, we taught blue damselfish to recognize the odour of three common reef predators in live and degraded coral environments and then stocked them onto live or degraded patch reefs, where we monitored their subsequent response to predator odour along with their survival. Damselfish learned to recognize predator odours in both coral environments, but the intensity of their antipredator response was much greater when the conditioning and test environments matched. Fish released on degraded coral had about 50% higher survival if they had been trained in the presence of degraded coral rather than live coral. Altering the intensity of antipredator responses could have rather profound consequences on population growth.
DOI: 10.6084/m9.figshare.8113208
title: Identifying Common Decision Problem Elements for the Management of Emerging Fungal Diseases of Wildlife

description: Emerging infectious diseases (EIDs) of wildlife have characteristics that make them difficult to manage, leading to reactive and often ineffective management strategies. Currently, two fungal pathogens, <i>Pseudogymnoascus destructans</i> (<i>Pd</i>) and <i>Batrachochytrium salamandrivorans</i> (<i>Bsal</i>), are causing declines in novel host species. To improve the application of management strategies addressing the risk of these pathogens to North American wildlife, we queried wildlife managers about their concerns regarding managing populations of bats and amphibians potentially impacted by <i>Pd</i> and <i>Bsal</i>. Using these responses, we identified aspects of each decision problem that were shared across pathogens, regions and agencies – and found similarities in decision-problem elements for disease management. Reframing management problems as decisions can enable managers to identify similarities across EIDs, i.e. uncertainties within management actions, and improve reactive responses if proactive management is not possible. Such an approach recognizes context-specific constraints and identifies relevant uncertainties that must be reduced in developing a response.
DOI: 10.6084/m9.figshare.8113208.v1
title: Identifying Common Decision Problem Elements for the Management of Emerging Fungal Diseases of Wildlife

description: Emerging infectious diseases (EIDs) of wildlife have characteristics that make them difficult to manage, leading to reactive and often ineffective management strategies. Currently, two fungal pathogens, <i>Pseudogymnoascus destructans</i> (<i>Pd</i>) and <i>Batrachochytrium salamandrivorans</i> (<i>Bsal</i>), are causing declines in novel host species. To improve the application of management strategies addressing the risk of these pathogens to North American wildlife, we queried wildlife managers about their concerns regarding managing populations of bats and amphibians potentially impacted by <i>Pd</i> and <i>Bsal</i>. Using these responses, we identified aspects of each decision problem that were shared across pathogens, regions and agencies – and found similarities in decision-problem elements for disease management. Reframing management problems as decisions can enable managers to identify similarities across EIDs, i.e. uncertainties within management actions, and improve reactive responses if proactive management is not possible. Such an approach recognizes context-specific constraints and identifies relevant uncertainties that must be reduced in developing a response.
DOI: 10.6084/m9.figshare.8976473
title: On the discovery of population-specific state transitions from single-cell RNA sequencing data

description: 10x genomics single cell data -- 8 mice, treated either with vehicle or LPS (4 replicates each). Brain cortex tissue. See the enclosed metadata.xlsx files. Enclosed are the output files (barcodes.tsv, genes.tsv, matrix.mtx) needed for preprocessing and analysis in the R scripts from <br>https://github.com/HelenaLC/muscat-comparison/tree/master/LPS
DOI: 10.25934/00003516.0
title: Available IPD datapackage for study 'A Randomised, Double-blind, Placebo Controlled, Parallel Group 24 Week Study to Assess the Efficacy and Safety of BI 1356 (5 mg) in Combination With 30 mg Pioglitazone (Both Administered Orally Once Daily), Compared to 30 mg Pioglitazone Plus Placebo in Drug Naive or Previously Treated Type 2 Diabetic Patients With Insufficient Glycaemic Control.'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00003516.1
title: IPD datapackage for study 'A Randomised, Double-blind, Placebo Controlled, Parallel Group 24 Week Study to Assess the Efficacy and Safety of BI 1356 (5 mg) in Combination With 30 mg Pioglitazone (Both Administered Orally Once Daily), Compared to 30 mg Pioglitazone Plus Placebo in Drug Naive or Previously Treated Type 2 Diabetic Patients With Insufficient Glycaemic Control.' and research request: 'Stratification of SGLT2 inhibitor glucose lowering therapy in Type 2 diabetes'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.6084/m9.figshare.8111609
title: sc_latitude_radius.zip

description: More correct scripts, direct collision<br>
DOI: 10.6084/m9.figshare.8111609.v1
title: sc_latitude_radius.zip

description: More correct scripts, direct collision<br>
DOI: 10.6084/m9.figshare.8111603
title: Log Files

description: Log Files Visual enhancement of relevantspeech in a ‘cocktail party’
DOI: 10.6084/m9.figshare.8111594
title: Source Data.zip

description: This dataset includes data to generate figures.
DOI: 10.6084/m9.figshare.8111594.v1
title: Source Data.zip

description: This dataset includes data to generate figures.
DOI: 10.6084/m9.figshare.8111525
title: EEG Files

description: EEG Files for Visual enhancement of relevantspeech in a ‘cocktail party’
DOI: 10.6084/m9.figshare.8111525.v1
title: EEG Files

description: EEG Files for Visual enhancement of relevantspeech in a ‘cocktail party’
DOI: 10.6084/m9.figshare.8111492
title: InSilicoSeq Test Data

description: Bioconda doesn't want test data co-located with build configurations, so I'm loading this here for the InSilicoSeq Bioconda recipe.<br>
DOI: 10.6084/m9.figshare.8111408
title: Pawpaw Defoliation Data

description: Data from an observational study indicating that defoliation by a native herbivore, <i>Omphalocera munroei</i>, led to patch size reduction of a native plant species, <i>Asimina triloba,</i> following small-scale removal of the Amur honeysuckle,<i> Lonicera maackii</i>.<br>
DOI: 10.25390/caryinstitute.8111345
title: Cary Institute Environmental Monitoring Program Current Year Data

description: The Cary Institute of Ecosystem Studies Environmental Monitoring Program is a long-term data collection program designed to understand how the environment changes over time. The program includes monitoring of climate including temperature and precipitation, as well as variables related to air pollution, such as acid deposition and ozone, and water pollution and other streamwater chemistry. Our solar radiation monitoring includes diffuse and global photosynthetically active radiation (PAR), diffuse and global shortwave radiation, net radiation and UV. Long-term monitoring of solar radiation provides us with an understanding of atmospheric energy dynamics, which can affect natural and human systems. The Cary Institute of Ecosystem Studies, Environmental Monitoring Program furnishes data under the following conditions: The data have received quality assurance scrutiny by our program, and, although we are confident of the accuracy of these data, Cary Institute will not be held liable for errors in these data. Data are subject to change resulting from updates in data screening or models used. Data citation: The following is a standard citation for referencing data from the Cary Institute of Ecosystem Studies, Environmental Monitoring Program:<br>Cary Institute of Ecosystem Studies, Environmental Monitoring Program. 2018 (or current year). Cary Institute of Ecosystem Studies, Box AB, Millbrook, NY 12545, www.caryinstitute.org. <br>Those wishing to publish data from Cary Institute of Ecosystem Studies, Environmental Monitoring Program are encouraged to contact data manager Vicky Kelly, kellyv@caryinstitute.org.<br>For complete data for previous years and for complete metadata, please see appropriate items for the Cary Institute Environmental Monitoring Program at https://caryinstitute.figshare.com/
DOI: 10.6084/m9.figshare.8111399
title: Rhizobiales-assigned draft genome orthology matrix

description: Table describing gene orthology between all draft and finished <i>Mesorhizobium </i>genomes determined to be of sufficient quality for species assignments. Orthology assignments generated using the roary pipeline.
DOI: 10.6084/m9.figshare.8111492.v2
title: InSilicoSeq Test Data

description: Bioconda doesn't want test data co-located with build configurations, so I'm loading this here for the InSilicoSeq Bioconda recipe.<br>
DOI: 10.6084/m9.figshare.8111390
title: Data - Noise in the labour ward

description: The article "Noise as a risk factor in the delivery room: a clinical study" is based one the data provided here.
DOI: 10.6084/m9.figshare.8111399.v1
title: Rhizobiales-assigned draft genome orthology matrix

description: Table describing gene orthology between all draft and finished <i>Mesorhizobium </i>genomes determined to be of sufficient quality for species assignments. Orthology assignments generated using the roary pipeline.
DOI: 10.6084/m9.figshare.8111408.v1
title: Pawpaw Defoliation Data

description: Data from an observational study indicating that defoliation by a native herbivore, <i>Omphalocera munroei</i>, led to patch size reduction of a native plant species, <i>Asimina triloba,</i> following small-scale removal of the Amur honeysuckle,<i> Lonicera maackii</i>.<br>
DOI: 10.6084/m9.figshare.8111492.v1
title: InSilicoSeq Test Data

description: Bioconda doesn't want test data co-located with build configurations, so I'm loading this here for the InSilicoSeq Bioconda recipe.<br>
DOI: 10.25390/caryinstitute.8111345.v1
title: Cary Institute Environmental Monitoring Program Current Year Data

description: The Cary Institute of Ecosystem Studies Environmental Monitoring Program is a long-term data collection program designed to understand how the environment changes over time. The program includes monitoring of climate including temperature and precipitation, as well as variables related to air pollution, such as acid deposition and ozone, and water pollution and other streamwater chemistry. Our solar radiation monitoring includes diffuse and global photosynthetically active radiation (PAR), diffuse and global shortwave radiation, net radiation and UV. Long-term monitoring of solar radiation provides us with an understanding of atmospheric energy dynamics, which can affect natural and human systems. The Cary Institute of Ecosystem Studies, Environmental Monitoring Program furnishes data under the following conditions: The data have received quality assurance scrutiny by our program, and, although we are confident of the accuracy of these data, Cary Institute will not be held liable for errors in these data. Data are subject to change resulting from updates in data screening or models used. Data citation: The following is a standard citation for referencing data from the Cary Institute of Ecosystem Studies, Environmental Monitoring Program:<br>Cary Institute of Ecosystem Studies, Environmental Monitoring Program. 2018 (or current year). Cary Institute of Ecosystem Studies, Box AB, Millbrook, NY 12545, www.caryinstitute.org. <br>Those wishing to publish data from Cary Institute of Ecosystem Studies, Environmental Monitoring Program are encouraged to contact data manager Vicky Kelly, kellyv@caryinstitute.org.<br>For complete data for previous years and for complete metadata, please see appropriate items for the Cary Institute Environmental Monitoring Program at https://caryinstitute.figshare.com/
DOI: 10.6084/m9.figshare.8111339
title: CCDB_6351.jpg

description: Electron micrograph of the cell body of a 0.25 um thick section through a cortical pyramidal neuron from the brain of a patient with Alzheimer's disease. The specimen was prepared from biopsy material obtained several decades ago.
DOI: 10.6084/m9.figshare.8111390.v1
title: Data - Noise in the labour ward

description: The article "Noise as a risk factor in the delivery room: a clinical study" is based one the data provided here.
DOI: 10.6084/m9.figshare.8111324
title: CCDB_6350.jpg

description: Electron micrograph of paired helical filaments in the cell body of a 0.25 um thick section through a cortical pyramidal neuron from the brain of a patient with Alzheimer's disease. The specimen was prepared from biopsy material obtained several decades ago.
DOI: 10.6084/m9.figshare.8111243
title: CCDB_6348.jpg

description: Single computed slice through a double tilt electron tomogram of a lamellar structure observed in HeLa cells transfected with mutant connexin 50, imaged using intermediate voltage electron microscopy, and labeled using the tetracysteine-ReHAsH system and fluorescence photoooxidation. The concentric double membrane layers of the aggregate appear to form "onion skin" sheets that do not form a closed structure along the long axis. The differential staining between the outside and inside is most likely due to impeded diffusion of DAB into the interior of these accumulations.
DOI: 10.6084/m9.figshare.8111339.v1
title: CCDB_6351.jpg

description: Electron micrograph of the cell body of a 0.25 um thick section through a cortical pyramidal neuron from the brain of a patient with Alzheimer's disease. The specimen was prepared from biopsy material obtained several decades ago.
DOI: 10.6084/m9.figshare.8111201
title: Graft glycocalyx degradation in LTX upload.xlsx

description: Data file from the study "Graft glycocalyx degradation in human liver transplantation".
DOI: 10.6084/m9.figshare.8111243.v1
title: CCDB_6348.jpg

description: Single computed slice through a double tilt electron tomogram of a lamellar structure observed in HeLa cells transfected with mutant connexin 50, imaged using intermediate voltage electron microscopy, and labeled using the tetracysteine-ReHAsH system and fluorescence photoooxidation. The concentric double membrane layers of the aggregate appear to form "onion skin" sheets that do not form a closed structure along the long axis. The differential staining between the outside and inside is most likely due to impeded diffusion of DAB into the interior of these accumulations.
DOI: 10.6084/m9.figshare.8111324.v1
title: CCDB_6350.jpg

description: Electron micrograph of paired helical filaments in the cell body of a 0.25 um thick section through a cortical pyramidal neuron from the brain of a patient with Alzheimer's disease. The specimen was prepared from biopsy material obtained several decades ago.
DOI: 10.6084/m9.figshare.8111192
title: ffpe_tumor_VEP_UCSC.vcf.gz

description: ffpe tumor variants gibbon
DOI: 10.6084/m9.figshare.8111195
title: postrad_tumor_VEP_UCSC.vcf.gz.tbi

description: postrad tumor variants index
DOI: 10.6084/m9.figshare.8111192.v1
title: ffpe_tumor_VEP_UCSC.vcf.gz

description: ffpe tumor variants gibbon
DOI: 10.6084/m9.figshare.8111195.v1
title: postrad_tumor_VEP_UCSC.vcf.gz.tbi

description: postrad tumor variants index
DOI: 10.6084/m9.figshare.8111186
title: ffpe_tumor_VEP_UCSC.vcf.gz.tbi

description: ffpe tumor variants index
DOI: 10.6084/m9.figshare.8111201.v1
title: Graft glycocalyx degradation in LTX upload.xlsx

description: Data file from the study "Graft glycocalyx degradation in human liver transplantation".