cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8328760
title: Unveiling the Catalytic Mechanism of NADP+-Dependent Isocitrate Dehydrogenase with QM/MM Calculations

description: Raw molecular dynamics simulations for the complexes simulated for 20 ns with the AMBER 12 software. Details can be found in the original manuscript (https://doi.org/10.1021/acscatal.5b01928). Molecular topology in AMBER Parameter Topology format and Trajectories in NETCDF binary coordinate format. Two protonation states were simulated: non-charged state of catalytic Lys212/Asp275 (<strong>LYN626+ASH275+ASP666</strong>) and charged state of catalytic Lys212/Asp275 (<strong>LYS626+ASP275+ASP666</strong>) Production trajectories are included in the <strong>MM-MD</strong> folders. Input and restart coordinates files for reproducibility are located in folders <strong>inputs</strong> and <strong>rst</strong>. Instructions for the calculations are summarized in <em>amber_min-md.sh</em>.
DOI: 10.21238/s8spray8135
title: Glider observations of circulation near abrupt topography

description: The overarching goal of these Spray underwater glider missions was to observe the wake caused by the North Equatorial Current flowing westward past the northern tip of Palau. A specific accomplishment was to quantify the vorticity in wake eddies.
DOI: 10.15468/dl.vqhntw
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medinilla whitfordii Merr."
 ]
}

 The dataset includes 82 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056672-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.87k7fz
title: Occurrence Download

description: A dataset containing 308 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myosotis krylovii Serg."
 ]
}

 The dataset includes 308 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056673-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evr3bn
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microtoena muliensis C.Y.Wu"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056674-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2wgkg6
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon phanerophlebium Merr."
 ]
}

 The dataset includes 10 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056675-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9gsbev
title: Occurrence Download

description: A dataset containing 196 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mundulea laxiflora Baker"
 ]
}

 The dataset includes 196 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056676-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8qese6
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Miraglossum verticillare (Schltr.) Kupicha"
 ]
}

 The dataset includes 32 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056677-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gs8ah8
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medinilla zoster Veldkamp"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056679-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mu6x3f
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microtoena nepalensis Stearn"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056678-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjm7ce
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myosotis kurdica Riedl"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056680-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dew99b
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon phyllanthifolium Thwaites ex Trimen"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056681-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5r9zd4
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mundulea menabeensis R.Vig."
 ]
}

 The dataset includes 50 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056683-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mmxukw
title: Occurrence Download

description: A dataset containing 2920 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "OccurrenceStatus is Present",
 "TaxonKey is Andigena hypoglauca (Gould, 1833)",
 "Year 1000-2024"
 ]
}

 The dataset includes 2920 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056682-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.apecm3
title: Occurrence Download

description: A dataset containing 374 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Miricacalia makineana (Yatabe) Kitam."
 ]
}

 The dataset includes 374 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056684-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d9bzh3
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Estonia, Russian Federation, Germany, Poland, Belarus, Ukraine, Hungary)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Thuidium abietinum (Hedw.) Schimp."
 ]
}

 The dataset includes 235 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056686-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dp7rhk
title: Occurrence Download

description: A dataset containing 195 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mediocalcar agathodaemonis J.J.Sm."
 ]
}

 The dataset includes 195 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056688-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6uyuqz
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microtoena omeiensis C.Y.Wu & S.J.Hsuan"
 ]
}

 The dataset includes 36 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056687-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.twsq6d
title: Occurrence Download

description: A dataset containing 4296 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myosotis latifolia Poir."
 ]
}

 The dataset includes 4296 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056689-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8stsc
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mundulea micrantha R.Vig."
 ]
}

 The dataset includes 132 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056691-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xyweaa
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon pileatum Jacq.-Fél."
 ]
}

 The dataset includes 66 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056690-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kz3uxx
title: Occurrence Download

description: A dataset containing 377 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Miscanthidium junceum (Stapf) Stapf"
 ]
}

 The dataset includes 377 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056692-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ej3mw
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mediocalcar arfakense J.J.Sm."
 ]
}

 The dataset includes 37 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056694-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.emrbea
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microtoena patchoulii (C.B.Clarke ex Hook.f.) C.Y.Wu & S.J.Hsuan"
 ]
}

 The dataset includes 55 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056695-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10854406
title: Example genome files

description: These genome are the input files of the GitHub respository intended to provide a framework for the estimation of dN/dS on archaeal genomes. 

A detailed summary of the steps to follow for the estimation of dN/dS are provided as the following book chapter:

These genomes were retrieved from the Genome Taxonomy Database release214. Genomes are >95% complete and have <5% contamination.
DOI: 10.5281/zenodo.10854407
title: Example genome files

description: These genome are the input files of the GitHub respository intended to provide a framework for the estimation of dN/dS on archaeal genomes. 

A detailed summary of the steps to follow for the estimation of dN/dS are provided as the following book chapter:

These genomes were retrieved from the Genome Taxonomy Database release214. Genomes are 100% complete and have <5% contamination.
DOI: 10.5281/zenodo.10892728
title: Example genome files

description: These genome are the input files of the GitHub respository intended to provide a framework for the estimation of dN/dS on archaeal genomes. 

A detailed summary of the steps to follow for the estimation of dN/dS are provided as the following book chapter:

These genomes were retrieved from the Genome Taxonomy Database release214. Genomes are >95% complete and have <5% contamination.
DOI: 10.15468/dl.8yqe9c
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mundulea obovata Du Puy & Labat"
 ]
}

 The dataset includes 23 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056696-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wfdzg5
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon planifolium Jacq.-Fél."
 ]
}

 The dataset includes 18 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056697-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.42yk5n
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Miscanthidium violaceum (K.Schum.) Robyns"
 ]
}

 The dataset includes 95 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056700-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3fe9an
title: Occurrence Download

description: A dataset containing 225 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mediocalcar bifolium J.J.Sm."
 ]
}

 The dataset includes 225 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056702-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ctnhj4
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microtoena praineana Diels"
 ]
}

 The dataset includes 87 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056703-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9xtj2k
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon plebejum Kurz"
 ]
}

 The dataset includes 113 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056705-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yynfau
title: Occurrence Download

description: A dataset containing 2113 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mundulea sericea (Willd.) A.Chev."
 ]
}

 The dataset includes 2113 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056704-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffvrcm
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Miscanthus depauperatus Merr."
 ]
}

 The dataset includes 8 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056706-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26030/r1hr-jv04
title: Transcriptomic analysis of quadriceps from mice subjected to simulated spaceflight euthanasia, freezing, and tissue preservation protocols

description: To understand the molecular mechanisms affected by spaceflight, it is essential to achieve high quality sample preservation on-orbit for downstream gene expression analysis. However, sample preservation protocols must also be compatible with available equipment and crew time. NASA's Rodent Research (RR) missions have used various methods for euthanasia, carcass preservation, and tissue preservation. This study extends the sample preservation study performed by GeneLab in GLDS-49 which examined conditions used for the RR-1 mission to include conditions used for multiple RR missions and is designed to help determine factors which may confound data analysis. To determine whether these various factors affect changes in gene expression, this ground-based study generated gene expression profiles measured by RNAseq from the quadriceps of 20-21 week-old female C57BL/6J mice. Multiple, interacting factors were investigated: 1) To understand how euthanasia protocols affect gene expression when mouse carcasses are slow frozen, mice were euthanized by either euthasol injection, ketamine/xylazine injection, or CO2 inhalation, and carcasses slow frozen on dry-ice mimicking carcass preservation in the MELFI on the ISS. Carcasses were thawed and RNA extracted from quadriceps; 2) To understand how carcass preservation protocols affect gene expression, mice were euthanized with euthasol and carcasses preserved by flash freezing in liquid nitrogen, slow freezing on dry ice, or immersion in RNAlater following three-way segmentation. Carcasses were thawed and RNA extracted from quadriceps; 3) To understand how tissue preservation protocols affect gene expression, mice were euthanized with euthasol and quadriceps immediately dissected and preserved by flash freezing in liquid nitrogen, slow freezing on dry ice, or immersion in RNAlater.
DOI: 10.15468/dl.2maqee
title: Occurrence Download

description: A dataset containing 469 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Estonia, Russian Federation, Germany, Poland, Belarus, Ukraine, Hungary)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tortella inclinata (R.Hedw.) Limpr."
 ]
}

 The dataset includes 469 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056707-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ret9hn
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microtoena robusta Hemsl."
 ]
}

 The dataset includes 18 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056709-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ufxwsp
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mediocalcar bulbophylloides J.J.Sm."
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056708-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frerpm
title: Occurrence Download

description: A dataset containing 138 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon polyanthemos Hook.fil."
 ]
}

 The dataset includes 138 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056711-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bznws7
title: Occurrence Download

description: A dataset containing 183 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mundulea stenophylla R.Vig."
 ]
}

 The dataset includes 183 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056712-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ykcz9g
title: Occurrence Download

description: A dataset containing 480 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Miscanthus ecklonii (Nees) Mabb."
 ]
}

 The dataset includes 480 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056713-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.phgp38
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microtoena stenocalyx C.Y.Wu & S.J.Hsuan"
 ]
}

 The dataset includes 13 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056715-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvdy8d
title: Occurrence Download

description: A dataset containing 346 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laqueus erythraeus Dall, 1920"
 ]
}

 The dataset includes 346 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056714-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mdvmgw
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon polyanthum H.L.Li"
 ]
}

 The dataset includes 22 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056717-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.