cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17294210.v2
title: Supplementary Material for: Evaluation of the Completeness of ALS Case Ascertainment in the U.S. National ALS Registry: Application of the Capture-Recapture Method

description: Introduction: The Centers for Disease Control and Prevention (CDC) National Amyotrophic Lateral Sclerosis (ALS) Registry is the first national registry for a chronic neurologic disease in the U.S. and uses a combination of case-finding methods including administrative healthcare data and patient self-registration. Methods: We applied capture-recapture methodology to estimate the completeness of the Registry for ascertaining patients with ALS for the first full year and the fourth years of the Registry (2011, 2014). The Registry uses the combination of two national administrative claims databases (Medicare and Veterans Affairs) with a self-register option at the registry portal. We conducted descriptive analyses of the demographic and clinical characteristics of the ALS cases identified by each of the sources and estimated the completeness of case ascertainment for each of the three ALS Registry sources individually, pairwise, and in all combinations. Results: Case-finding completeness was 54% in 2011 and improved to 56% in 2014. A smaller proportion of ALS patients under age 65 were ascertained than those 65 or older and ascertainment was also lower for non-White than White patients. The uncorrected ALS prevalence was 4.3/100,000 in 2011 (in 2014 5.0/100,000), but after correction for under-ascertainment, annual prevalence in 2011 was 7.9/100,000 (95% CI 7.6-8.2) (in 2014 was 8.9/100,000 (95% CI 8.7-9.2)). Discussion/Conclusion: Our findings indicate that administrative healthcare databases are a very efficient method for identifying the majority of ALS prevalent cases in the National ALS Registry and that the inclusion of a web registry portal for patients to self-register is important to ensure a more representative population for estimating ALS prevalence. Nonetheless, more than 40% of ALS cases were not ascertained by the Registry, with individuals younger than age 65 and people of color underrepresented. Recommendations are provided for additional methods that can be considered to improve the completeness of case ascertainment.
DOI: 10.6084/m9.figshare.28749752.v3
title: Beijing subway station_rainfall_20230601-20230831

description: Rainfall data during the 2023 flood season in Beijing30 minute time granularity
DOI: 10.17632/6c4bzj9nzr
title: Schistosoma haematobium protein array features

description: Information on the Schistosoma haematobium antigen features that were printed on a proteome array for subsequent probing with serum and urine antibodies.
DOI: 10.17632/m5jwxfswd8
title: HSTERM — A program to calculate potential curves and radial matrix elements for two-electron systems within the hyperspherical adiabatic approach

description: Abstract A FORTRAN 77 program is presented which calculates potential curves and matrix elements of radial coupling for two-electron systems using the hyperspherical coordinate method. The adiabatic and diabatic-by-sector close-coupling approaches are considered. The program calculates also the overlap matrices on borders of all sectors which are necessary for integration of close-coupling hyperradial equations within the sector-diabatic approach. It performs also the computation of the angular part o... Title of program: HSTERM Catalogue Id: ADBZ_v1_0 Nature of problem The purpose of this program is to calculate potential curves and matrix elements of radial coupling for two-electron systems within the hyper- spherical adiabatic [4] and diabatic-by-sector [5] approaches. The program computes also the dipole transition matrix elements in the length and acceleration forms and calculates overlap matrices necessary for integration of close-coupling equations in the diabatic-by-sector approach [5]. Versions of this program held in the CPC repository in Mendeley Data ADBZ_v1_0; HSTERM; 10.1016/0010-4655(95)00084-S This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/54zmgtkp2t
title: Transporter-mediated uptake of environmental L-glutamate in a freshwater sponge

description: This dataset examines the kinetic transport properties of environmental L-glutamate in the freshwater sponge Ephydatia muelleri. This is the first evidence of carrier-mediated amino acid transport in a freshwater sponge. We do not show evidence of sodium or proton linked transport pathways.
DOI: 10.6084/m9.figshare.13383059.v1
title: MT_SC_MH_QUALTRICS

description: Dataset for PLOS One manuscript:PONE-D-20-08466R1 <br>Can athletes be tough yet compassionate to themselves? Practical Implications for NCAA Mental Health Best Practice No. 4.<br>
DOI: 10.6084/m9.figshare.105936.v1
title: Gaussian Job Archive for C12H14Cl2N2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.19948013.v1
title: Example TDT block containing original data from perceptual constancy project

description: Data recorded from auditory cortex of ferret during vowel discrimination task, together with behavioral metadata. <br> Data is in OpenEx format from TDT.
DOI: 10.17632/3cx23k2b88
title: Data for: Phylogenomic analyses and divergence time estimation of Elateroidea (Coleoptera) based on RNA-Seq data
DOI: 10.17632/fm5hy2ksk8
title: Data for: Voice Disorders are Associated with Stress among Teachers: A Cross-Sectional Study

description: The data involves the variables and the values related to the article.
DOI: 10.17632/frr28xgh35
title: Performance ratios and performance loss rates of various PV technologies in Poland

description: Dtaset contains: monthly final yield, array capture loss and balance of systems loss for the PV systems investigated over 48 months of operation (a) pc-Si, (b) CIGS, (c) a-Si (d) CdTe, annual performance ratio of the analyzed technologies, monthly DC performance ratio of PV systems over 48 months of operation.
DOI: 10.17632/pykwjskznb
title: Simulation of heterogeneous degradation in amorphous polymers based on a discrete chain scission model

description: Supporting software for: Z. Pan, L. Brassart. A reaction-diffusion framework for hydrolytic degradation of amorphous polymers based on a discrete chain scission model, submitted in May 2023. Matlab codes can be used to reproduce numerical results presented in the paper, or for producing original results.
DOI: 10.6084/m9.figshare.20338335.v1
title: DNA barcode reference library for the West Sahara-Sahel reptiles

description: This project represents the first and thorough DNA reference barcoding dataset of the reptiles in the Western Sahara Sahel
DOI: 10.6084/m9.figshare.22346461.v1
title: Supplementary Material for: Comparison of Social Evaluative Anxiety and Theory of Mind Functions in Social Anxiety Disorder, Schizophrenia and Healthy Controls

description: Introduction: Despite the similarities in poor social competence and clinical manifestations of poor social behavior, no study has compared the theory of mind performance between social anxiety disorder (SAD) and schizophrenia, considering the effect of social-evaluative anxiety and neurocognitive functions. In our study, we aimed to compare the theory of mind functions and social-evaluative anxiety between patients with SAD and schizophrenia and healthy controls, and to examine the relationship between the theory of mind, neurocognitive skills, and social-evaluative anxiety. Methods: Thirty-four consecutive patients with schizophrenia, 29 patients with SAD, and 30 controls matched by age, education level, and sex were enrolled in the study. Structured Clinical Interview for DSM, Beck Depression Inventory, Liebowitz Social Anxiety Scale, Theory of Mind measures (Reading the Mind in the Eyes Test, Hinting Task, Faux Pas Test), Social Appearance Anxiety Scale, Fear of Positive Evaluation Scale, Fear of Negative Evaluation Scale-Short Form, and neuropsychological tests were administered to all participants. Results: A greater significant deterioration in theory of mind and neurocognitive functions was found in patients with schizophrenia compared to those with SAD and healthy controls. Social evaluation anxiety was highest in patients with SAD. Although social-evaluative anxiety was associated with theory of mind function in schizophrenia, only fear of positive evaluation was associated with SAD. In all groups, neither theory of mind nor neurocognitive ability measures were correlated with social anxiety levels and related symptoms. Conclusions: The impaired theory of mind functioning detected in our study is more prominent in schizophrenia group and largely independent on anxiety in schizophrenia and SAD. Although social evaluation anxiety, as a transdiagnostic concept, seems to be independent of theory of mind function in general, fear of positive evaluation seems to be associated with hinting in both disorders.
DOI: 10.6084/m9.figshare.28482608.v1
title: Salonen_ea-NA_drought-Supplementary_Data.xlsx

description: Supplementary dataset related to the paper "Patterns and drivers of Holocene moisture variability in mid-latitude eastern North America" by Sakari Salonen and coauthors.This file contains the paleoclimate reconstructions and paleoclimate model simulation results discussed in the paper.
DOI: 10.17632/24bv5v2mnx
title: GRL dataset

description: Lakes and reservoirs are significant sources of methane (CH4) and carbon dioxide (CO2) in global scale, yet their responses to climate change remain inadequately studied.We present high-resolution vertical profiles of CH4 and CO2 concentrations to elucidate their production, storage, and emission dynamics in a eutrophic subtropical reservoir. Methanogenesis initiated in the hypoxic hypolimnion led to a steady rise in CH4 and CO2 levels, with CH4 comprising up to ~50% of total carbonaceous greenhouse gases during ventilation. During stratification, oxic CH4 production dominated in surface waters, while vertical mixing, driven by cooling and wind events, enhanced hypolimnetic CH4 release. A synthesis of global CH4 fluxes and stratification days suggests that prolonged stratification may enhance CH4 storage but limit its release from bottom waters. With increasing eutrophication and global warming, enhanced stratification could amplify the climatic impact of aerobic, rather than anaerobic, CH4 production in subtropical lakes and reservoirs.
DOI: 10.17632/wy343nk8nt
title: Data for: Adaptation action and research in glaciated mountain systems: Are they enough to meet the challenge of climate change?

description: This Excel file contains three pages of data: 1. Data for all documents reviewed. 2. Data for documents that were explicitly framed as mountain and adaptation focused. 3. Summary statistics for both sets of documents. For pages 1 and 2, columns represent questions asked about each document. See the Questionnaire and Codebook in the article’s Supplementary Materials for details about questions as well as descriptions for possible response options. For pages 1 and 2, values in Column A “PR” and “GL” stand for per-reviewed and grey literature, respectively. For pages 1 and 2, each row represents a ‘discrete adaptation initiative’. Discrete adaptation initiatives are defined as actions that are distinct in their timing, form, intent, or scope. One document may report several discrete adaptation initiatives. For pages 1 and 2, raw data is disaggregated in columns AO - GF to facilitate analysis.
DOI: 10.17632/pm4sw7hy3b
title: MOYA-Bolivia Llanos de Moxos Wetland Methane Emission Data and Modelling

description: Data associated with the publication Very large fluxes of methane measured above Bolivian seasonal wetlands, 10.1073/pnas.2206345119.
DOI: 10.17632/s8jbmtxc7n
title: Data for art student satisfaction

description: This dataset contains information about the satisfaction of art students in Chinese universities, covering 1524 programs.
DOI: 10.21233/w54z-cp69
title: Bense Marsh ostracode surface sample dataset

description: Raw data for the Bense Marsh ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/49zsh4b2hg
title: Defined p16High senescent cell types are indispensable for mouse healthspan

description: The accumulation of senescent cells can drive many age-associated phenotypes and pathologies. Consequently, it has been proposed that removing senescent cells might extend lifespan. Here we generated two knock-in mouse models targeting the best-characterized marker of senescence, p16Ink4a. Using a genetic lineage tracing approach, we found that age-induced p16High senescence is a slow process that manifests around 10-12 months of age. The majority of p16High cells were vascular endothelial cells primarily in liver sinusoids (LSECs), and to lesser extent macrophages and adipocytes. In turn, continuous or acute elimination of p16High senescent cells disrupted blood–tissue barriers with subsequent liver and peri-vascular tissue fibrosis and health deterioration. Our data show that senescent LSECs are not replaced after removal and have important structural and functional roles in the aging organism. In turn, delaying senescence or replacement of senescent LSECs could represent a powerful tool in slowing down aging.
DOI: 10.17632/69k277b76r
title: A. thaliana Col-0 juvenile leaf time-lapse images

description: Raw confocal data used in the following Manuscript: 
TITLE: Cell-cycle-linked growth reprogramming encodes developmental time into leaf morphogenesis
JOURNAL: Current Biology
Article Type: Research Article 
Authors: Xin-Min Li, Hannah Jenke, Sören Strauss, Christos Bazakos, Gabriella Mosca, Rena Lymbouridou, Daniel Kierzkowski, Ulla Neumann, Purva Naik, Peter Huijser, Stefan Laurent, Richard S. Smith, Adam Runions, Miltos Tsiantis*
*Corresponding Authors: Miltos Tsiantis (tsiantis@mpipz.mpg.de)
Cellular growth of Col-0 juvenile leaves (leaf1) was tracked using live imaging in a 24-hour time window (D, days after initiation). 
TdTomato signals from the plasma membrane were captured by a Leica TCS SP8 Confocal Laser Scanning Microscope, and images were channel-split and converted into .tif format stacks using FIJI. For further information, please refer to the related publication.
DOI: 10.17632/8yrn4bfhv8
title: Isotopically Heavy Micrometeorites – Fragments of CY Chondrite or a New Hydrous Parent Body? (Supporting Data)

description: Supporting data for: Isotopically heavy micrometeorites – fragments of CY chondrite or a new hydrous parent body? 
Including: O-isotope raw fiels, example μCT tomographic slices and SEM data.
DOI: 10.6084/m9.figshare.23807175.v1
title: Supplementary Material for: Dietary Flavonoid Intake and Carotid Calcification in Patients with Ischemic Stroke

description: Introduction: Owing to the antioxidant and anti-inflammatory effects, flavonoids can influence the initiation and development of atherosclerosis, but the underlying mechanisms remain largely undetermined. This study aimed to evaluate the associations between dietary flavonoids and carotid calcification in patients with ischemic stroke. Methods: This study screened consecutive patients with ischemic stroke via Nanjing Stroke Registry Program during February 2016 and April 2021. A semi-quantitative food frequency questionnaire was used to evaluate dietary consumption of flavonoids and other nutritional components. Presence and degree of carotid calcification were determined according to Agatston scores on computer tomography angiography. Logistic regression was performed to evaluate the association between dietary flavonoids (total flavonoids, flavonols, flavones, flavanones, flavan-3-ols, anthocyanins, and isoflavones) and carotid calcification. Results: Of the 601 enrolled patients, 368 (61.2%) were detected with carotid calcification. Patients with high intake of total flavonoids (the fifth quintile) had a 52% lower carotid calcification risk than those with low intake (the first quintile; OR =0.48; 95% CI, 0.26 -0.90; P =0.007 for trends) after adjusting for major confounders. Patients with high intake of flavan-3-ols (the fifth quintile) had a 51% lower carotid calcification risk than those with low intake (the first quintile; OR =0.49; 95% CI, 0.25 -0.97; P =0.016 for trends). Discussion/Conclusion: Dietary flavonoid intake is associated with carotid calcification, and, therefore, may influence the risk of stroke occurrence and recurrence.
DOI: 10.6084/m9.figshare.25323052.v1
title: Supplementary Material for: Near adult height and BMI changes in growth hormone treated short children with Noonan syndrome: the Belgian experience

description: Introduction
A variable near adult height (NAH) outcome after growth hormone (GH) therapy in Noonan syndrome (NS) patients with short stature has been reported. The main objective of this study was to evaluate NAH and body mass index (BMI) evolution in a large Belgian cohort of NS patients treated for short stature. The secondary objectives were to investigate whether sex, genotype, the presence of a thoracic deformity and/or a heart anomaly might affect NAH and to validate the recently developed NAH prediction model by Ranke et al. 
Methods 
Clinical and auxological data of GH treated short NS patients born before 2001 were extracted from the national Belgrow registry. NAH was available in 54 (35 male) genotyped NS using a gene panel of 9 genes, showing pathogenic variants in PTPN11 in 32 and in SOS1 in 5 patients, while in 17 patients gene panel analysis was inconclusive (no mutation group).
Results
After a median (P10; P90) duration of 5.4 (2.2-10.3) years of GH therapy with a median dose of 0.05 mg/kg/day NS patients reached a median NAH of -1.7 (-3.4; -0.8) SDS. Median total height gain was 1.1 (0.1; 2.3) SDS. Sex, genotype and the presence of a thoracic or cardiac malformation did not correlate with NAH or total height gain. Linear regression modelling revealed that height SDS at start (beta=0.90, p&lt;0.001), mid-parental height SDS (beta =0.27; p=0.005), birth weight SDS (beta=0.15; p=0.051), age at start (beta=0.07; p=0032) were independently associated with NAH SDS. Median BMI SDS increased significantly (p&lt;0.001) from -1.0 (-2.5; 0.0) at start to -0.2 (-1.5; 0.9) at NAH. The observed NAH in a subgroup of 44 patients with more than 3 years of GH treatment was not statistically different from the predicted NAH by the Noonan NAH prediction model of Ranke. 
Conclusion 
Long-term GH therapy at a dose of 0.05 mg/kg/day in short NS patients is effective in improving adult height and BMI, irrespective of the genotype and presence or absence of cardiac and or thoracic anomalies.
DOI: 10.17632/h355wmc5cf
title: A simple model to calculate rail bending

description: These matlab-scripts calculate the bending moments used to evaluate the crack detection method in Meyer, K. A., D. Gren, J. Ahlström, A. Ekberg (2021) “In-field Railhead Crack Detection Using Digital Image Correlation.”, currently available as preprint, https://engrxiv.org/zhg5c/
DOI: 10.17632/wxg6pd862z
title: Sectoral shifts and labour market outcomes in sub-Saharan Africa

description: Using the Economic Transformation Database, this paper attempts to assess the magnitude of structural transformation and the effects of sectoral shifts due to structural transformation on the labour market performance of 18 sub-Saharan African countries over the period from 1990 to 2018. The first part of this study examines some patterns of structural transformation in Africa, focusing on sectoral output shares, sectoral employment shares, and the relative labour productivity of sectors. We find that Africa is gradually advancing towards structural transformation but at a very slow speed. The empirical analysis indicates that the sectoral shift has a significantly negative impact on the labour market, whereas gross domestic product growth and population density reduce unemployment and non-employment.
DOI: 10.17632/2vnz2ng6hp
title: Body positive social media and women with adverse history

description: This study aimed to examine the effect of these body-positive images on mood and body satisfaction in young women who experienced emotional abuse and/or bullying victimization. A sample of 197 women aged 18-35 years completed questionnaires of emotional abuse/bullying victimization, body appreciation and self-objectification. They also rated levels of mood and body satisfaction before and after viewing either body-positive, thin-ideal or neutral images.
DOI: 10.17632/fywppsfw78
title: Betaine protects human melanocytes from H2O2-induced dysfunction and degeneration

description: This study aimed to clarify the potential protective effects and mechanisms of betaine against H2O2-induced apoptosis and dysfunction in human melanocytes. Pretreatment with 2mM betaine increased proliferation, decreased apoptotic rates, and reduced intracellular oxidative damage in both normal and vitiligo melanocytes. It also reversed H2O2-induced cellular dysfunction in migration and melanogenesis. Betaine upregulated the expression of SCF/c-KIT/MITF signaling components, and its protective effects on melanocytes were partially blocked by c-KIT inhibitor treatment. Furthermore, betaine reduced the Bax/Bcl-2 ratio and the release of cleaved caspase-3 protein, and prevented the phosphorylation of ERK, p38, and JNK MAPKs in H2O2-treated melanocytes. Additionally, 5-methylcytosine immunodetection results indicated that betaine pretreatment reversed the enhancement of global DNA demethylation induced by H2O2 in melanocytes. These results demonstrate for the first time that betaine protects human melanocytes from H2O2-induced dysfunction and degeneration by modulating SCF/c-KIT, MITF, apoptosis, and MAPK pathways.
DOI: 10.17632/kfzzt5sc5m
title: The adipose-neural axis is involved in epicardial adipose tissue-related cardiac arrhythmias

description: The original Western Blot images
DOI: 10.17632/v3wpdnwrjs
title: Medical Comorbidities and Gender Distribution Among Patients with Lichen Planopilaris and Frontal Fibrosing Alopecia: A Retrospective Cohort Study- Supplementary Methods

description: We performed a retrospective cohort study at Columbia University Irving Medical Center (CUIMC) to investigate the gender distribution and comorbidities associated with lichen planopilaris (LPP) and frontal fibrosis alopecia (FFA). we have included the supplemental methods for this analysis here. The full paper is available through the Journal of the American Academy of Dermatology.
DOI: 10.17632/vytyg7sdxx
title: Asymmetric centromeres differentially coordinate with mitotic machinery to ensure biased sister chromatid segregation in germline stem cells

description: Many stem cells utilize asymmetric cell division (ACD) to produce a self-renewed stem cell and a differentiating daughter cell. How non-genic information could be inherited differentially to establish distinct cell fates is not well understood. Here, we report a series of spatiotemporally regulated asymmetric components, which ensure biased sister chromatid attachment and segregation during ACD of Drosophila male germline stem cells (GSCs). First, sister centromeres are differentially enriched with proteins involved in centromere specification and kinetochore function. Second, temporally asymmetric microtubule activities and polarized nuclear envelope breakdown allow for the preferential recognition and attachment of microtubules to asymmetric sister kinetochores and sister centromeres. Abolishment of either the asymmetric sister centromeres or the asymmetric microtubule activities results in randomized sister chromatid segregation. Together, these results provide the cellular basis for partitioning epigenetically distinct sister chromatids during stem cell ACDs, which opens new directions to study these mechanisms in other biological contexts.