cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16814725.v1
title: Studies on algae from the Order Synurales (Chrysophyceae) in Northern Vietnam

description: This table is about characteristics of water samples from 55 localities in four provinces in Vietnam
DOI: 10.6084/m9.figshare.16814701
title: Variability in environmental persistence but not per capita transmission rates of the amphibian chytrid fungus leads to differences in host infection prevalence

description: Data corresponding to "Variability in environmental persistence but not per capita transmission rates of the amphibian chytrid fungus leads to differences in host infection prevalence" published in Journal of Animal Ecology in 2021.
DOI: 10.5066/p9vnzh7i
title: EverSparrow model scripts and outputs

description: EverSparrow is a spatially explicit Bayesian model of Cape Sable Seaside Sparrow (Ammospiza maritima mirabilis; CSSS) presence that quantifies the interdependent relationships between a range of environmental factors and CSSS presence. Using hydrologic conditions such as mean 4-year hydroperiod and maximum depth, fire occurrence history, and vegetation structure throughout the range of CSSS, EverSparrow provides weekly probabilities of CSSS presence on a 400 x 400 m grid. Here we provide the modeling scripts used to develop EverSparrow (including the frequentist model developed and included in the ensemble model), the validation scripts, a script to run the EverSparrow model and create predicted surfaces of CSSS probability of presence, and a netcdf showing predicted probability of presence from 1995 through 2020. For full details of the model development process, see Larger Work citation.
DOI: 10.3886/e152481
title: JCONRES-2018-560_

description: JCR Submission
DOI: 10.6084/m9.figshare.16814725.v2
title: Gusev et al., 2021 Studies on algae from the Order Synurales (Chrysophyceae) in Northern Vietnam

description: This table is about characteristics of water samples from 55 localities in four provinces in Vietnam
DOI: 10.5063/f10v8b7c
title: The effects of exclosures and foundation plant species on fine-scale desert temperatures

description: HOBO temperature loggers were deployed under Ephedra californica shrubs and in the open both surrounded by open-topped mesh exclosures and without exclosures in Carrizo National Monument.
DOI: 10.5281/zenodo.5570629
title: NCI60

description: NCI60 PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5570629 <strong>Disclaimer</strong> The NCI60 data were generated and shared by the US National Cancer Institute. The Haibe-Kains Lab has reprocessed and re-annotated the data to maximize overlap with other pharmacogenomic datasets. <strong>Data Usage Policy</strong> The data are provided under Creative Commons BY 4.0 license. Please note: The data files are experimental and academic in nature and are not licensed or certified by any regulatory body. <strong>Please cite the following when using these data</strong> Shoemaker, R. The NCI60 human tumour cell line anticancer drug screen. Nat Rev Cancer 6, 813–823 (2006). https://doi.org/10.1038/nrc1951
DOI: 10.5281/zenodo.5217440
title: NCI60

description: NCI60 PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5570629 <strong>Disclaimer</strong> The NCI60 data were generated and shared by the US National Cancer Institute. The Haibe-Kains Lab has reprocessed and re-annotated the data to maximize overlap with other pharmacogenomic datasets. <strong>Data Usage Policy</strong> The data are provided under Creative Commons BY 4.0 license. Please note: The data files are experimental and academic in nature and are not licensed or certified by any regulatory body. <strong>Please cite the following when using these data</strong> Shoemaker, R. The NCI60 human tumour cell line anticancer drug screen. Nat Rev Cancer 6, 813–823 (2006). https://doi.org/10.1038/nrc1951
DOI: 10.5281/zenodo.5570757
title: PRISM

description: PRISM PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5570757. <strong>Disclaimer</strong> The PRISM data were generated and shared by PRISM Lab at Broad Institute. The Haibe-Kains Lab has reprocessed and re-annotated the data to maximize overlap with other pharmacogenomic datasets. <strong>Data Usage Policy</strong> The data are provided under Creative Commons BY 4.0 license. Please note: The data files are experimental and academic in nature and are not licensed or certified by any regulatory body. <strong>Please cite the following when using these data</strong> Corsello SM, Nagari RT, Spangler RD, et al. Discovering the anti-cancer potential of non-oncology drugs by systematic viability profiling. Nat Cancer. 2020;1(2):235-248. doi:10.1038/s43018-019-0018-6
DOI: 10.15468/9frfjy
title: On some deep-sea Stenheliinae from the Gulf of California and the west coast of the Baja California Peninsula (Mexico): the genus Delavalia Brady, 1869 and proposal of Archaeohuysia gen. nov. and Diarthropodella gen. nov. (Copepoda Harpacticoida: Miraciidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Gómez, Samuel (2021): On some deep-sea Stenheliinae from the Gulf of California and the west coast of the Baja California Peninsula (Mexico): the genus Delavalia Brady, 1869 and proposal of Archaeohuysia gen. nov. and Diarthropodella gen. nov. (Copepoda Harpacticoida: Miraciidae). Zootaxa 5051 (1): 171-235, DOI: https://doi.org/10.11646/zootaxa.5051.1.12
DOI: 10.5281/zenodo.5217482
title: PRISM

description: PRISM PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5570757. <strong>Disclaimer</strong> The PRISM data were generated and shared by PRISM Lab at Broad Institute. The Haibe-Kains Lab has reprocessed and re-annotated the data to maximize overlap with other pharmacogenomic datasets. <strong>Data Usage Policy</strong> The data are provided under Creative Commons BY 4.0 license. Please note: The data files are experimental and academic in nature and are not licensed or certified by any regulatory body. <strong>Please cite the following when using these data</strong> Corsello SM, Nagari RT, Spangler RD, et al. Discovering the anti-cancer potential of non-oncology drugs by systematic viability profiling. Nat Cancer. 2020;1(2):235-248. doi:10.1038/s43018-019-0018-6
DOI: 10.5281/zenodo.5570779
title: Sample simulation results for showyourwork

description: A sample dataset uploaded using showyourwork.
DOI: 10.5281/zenodo.5570778
title: Sample simulation results for showyourwork

description: A sample dataset uploaded using showyourwork.
DOI: 10.5281/zenodo.5569525
title: Network analysis reveals rare disease signatures across multiple levels of biological organization - Co-expression dataset

description: The GTEx-derived co-expression data in 38 tissues generated in Buphamalai et.al., Network analysis reveals rare disease signatures across multiple levels of biological organization, Nature Communications 2021. Please see the publication's Methods section for details.
DOI: 10.5281/zenodo.5569524
title: Network analysis reveals rare disease signatures across multiple levels of biological organization - Co-expression dataset

description: The GTEx-derived co-expression data in 38 tissues generated in Buphamalai et.al., Network analysis reveals rare disease signatures across multiple levels of biological organization, Nature Communications 2021. Please see the publication's Methods section for details.
DOI: 10.5281/zenodo.5568833
title: Data of "Interaction-based material network: a general framework for (porous) microstructured materials"

description: <pre>Data related to the publication (we would be grateful if you could cite the paper in the case in which you are using the data) title = "Interaction-based material network: a general framework for (porous) microstructured materials", journal = "Computer Methods in Applied Mechanics and Engineering", pages = " ", year = "202?", issn = "0045-7825", doi = "https://doi.org/10.1016/j.cma.", author = "Nguyen, Van Dung and Noels, Ludovic"</pre>
description: Van Dung Nguyen is Postdoctoral Researcher at the Belgian National Fund for Scientific Research (FNRS) Computational resources have been provided by the supercomputing facilities of the Consortium des Equipements de Calcul Intensif en Federation Wallonie Bruxelles (CECI) funded by the Fond de la Recherche Scientifique de Belgique (FRS-FNRS).
DOI: 10.5281/zenodo.5568832
title: Data of "Interaction-based material network: a general framework for (porous) microstructured materials"

description: <pre>Data related to the publication (we would be grateful if you could cite the paper in the case in which you are using the data) title = "Interaction-based material network: a general framework for (porous) microstructured materials", journal = "Computer Methods in Applied Mechanics and Engineering", pages = " ", year = "202?", issn = "0045-7825", doi = "https://doi.org/10.1016/j.cma.", author = "Nguyen, Van Dung and Noels, Ludovic"</pre>
description: Van Dung Nguyen is Postdoctoral Researcher at the Belgian National Fund for Scientific Research (FNRS) Computational resources have been provided by the supercomputing facilities of the Consortium des Equipements de Calcul Intensif en Federation Wallonie Bruxelles (CECI) funded by the Fond de la Recherche Scientifique de Belgique (FRS-FNRS).
DOI: 10.6084/m9.figshare.16814842
title: Datos Mexico Dimensions.xlsx

description: Data collected and processed from Dimensions database, with the aim to build a scientometric multidimensional profile of Mexican scientific production during the period 2010-2019.<br>
DOI: 10.6084/m9.figshare.16814842.v1
title: Datos Mexico Dimensions.xlsx

description: Data collected and processed from Dimensions database, with the aim to build a scientometric multidimensional profile of Mexican scientific production during the period 2010-2019.<br>
DOI: 10.5281/zenodo.5567021
title: Global Fire Weather Indices - supporting data for Jain et al. 2021, Nature Climate Change

description: Daily fire weather indices (FWI and ISI, outputs of the Canadian Fire Weather Index System) from 1979-2020 at 0.25 deg resolution. This data supports the analysis in "Observed increases in extreme fire weather driven by atmospheric humidity and temperature", Jain et al. 2021, accepted for publication in Nature Climate Change.<br> <br> Variables were processed using inputs from the ERA5 Reanalysis (hourly surface data from 1979–2020, available from https://cds.climate.copernicus.eu/cdsapp#!/dataset/reanalysis-era5-single-levels?tab=overview). FWI System indices were calculated using the CFFDRS R package using the overwintering procedure outlined in McElhinny et al. 2020. References McElhinny, M., Beckers, J. F., Hanes, C., Flannigan, M., and Jain, P.: A high-resolution reanalysis of global fire weather from 1979 to 2018 – overwintering the Drought Code, Earth Syst. Sci. Data, 12, 1823–1833, https://doi.org/10.5194/essd-12-1823-2020, 2020.
DOI: 10.5281/zenodo.3626192
title: Global Fire Weather Indices - supporting data for Jain et al. 2021, Nature Climate Change

description: Daily fire weather indices (FWI and ISI, outputs of the Canadian Fire Weather Index System) from 1979-2020 at 0.25 deg resolution. This data supports the analysis in "Observed increases in extreme fire weather driven by atmospheric humidity and temperature", Jain et al. 2021, accepted for publication in Nature Climate Change.<br> <br> Variables were processed using inputs from the ERA5 Reanalysis (hourly surface data from 1979–2020, available from https://cds.climate.copernicus.eu/cdsapp#!/dataset/reanalysis-era5-single-levels?tab=overview). FWI System indices were calculated using the CFFDRS R package using the overwintering procedure outlined in McElhinny et al. 2020. References McElhinny, M., Beckers, J. F., Hanes, C., Flannigan, M., and Jain, P.: A high-resolution reanalysis of global fire weather from 1979 to 2018 – overwintering the Drought Code, Earth Syst. Sci. Data, 12, 1823–1833, https://doi.org/10.5194/essd-12-1823-2020, 2020.
DOI: 10.5517/ccdc.csd.cc23snl5
title: CCDC 1960117: Experimental Crystal Structure Determination

description: Related Article: Yuesen Shi, Tianle Huang, Ting Wang, Jian Chen, Xuexin Liu, Zhouping Wu, Xiaofang Huang, Yao Zheng, Zhongzhen Yang, Yong Wu|2021|Chem.-Eur.J.|27|13346|doi:10.1002/chem.202101839
DOI: 10.5281/zenodo.5567062
title: Daily maximum VPD - supporting data for Jain et al. 2021, Nature Climate Change

description: Global daily maximum Vapour Pressure Deficit (VPD) for 1979-2020 at 0.25 deg resolution. This data supports the analysis in "Observed increases in extreme fire weather driven by atmospheric humidity and temperature", Jain et al. 2021, accepted for publication in Nature Climate Change. VPD was calculated using the hourly ERA5 2m temperature and 2m dewpoint temperature using the Alduchov and Eskridge (1996) approximation as implemented in the R package ‘bigleaf’ (Knauer et al. 2018). Variables were processed using inputs from the ERA5 Reanalysis (hourly surface data from 1979–2020, available from https://cds.climate.copernicus.eu/cdsapp#!/dataset/reanalysis-era5-single-levels?tab=overview). References Alduchov, O. A. & Eskridge, R. E., 1996: Improved Magnus form approximation of saturation vapor pressure. Journal of Applied Meteorology, 35, 601-609 Knauer, J., El-Madany, T. S., Zaehle, S., & Migliavacca, M. (2018). Bigleaf—An R package for the calculation of physical and physiological ecosystem properties from eddy covariance data. <em>PloS one</em>, <em>13</em>(8), e0201114.
DOI: 10.5281/zenodo.5567061
title: Daily maximum VPD - supporting data for Jain et al. 2021, Nature Climate Change

description: Global daily maximum Vapour Pressure Deficit (VPD) for 1979-2020 at 0.25 deg resolution. This data supports the analysis in "Observed increases in extreme fire weather driven by atmospheric humidity and temperature", Jain et al. 2021, accepted for publication in Nature Climate Change. VPD was calculated using the hourly ERA5 2m temperature and 2m dewpoint temperature using the Alduchov and Eskridge (1996) approximation as implemented in the R package ‘bigleaf’ (Knauer et al. 2018). Variables were processed using inputs from the ERA5 Reanalysis (hourly surface data from 1979–2020, available from https://cds.climate.copernicus.eu/cdsapp#!/dataset/reanalysis-era5-single-levels?tab=overview). References Alduchov, O. A. & Eskridge, R. E., 1996: Improved Magnus form approximation of saturation vapor pressure. Journal of Applied Meteorology, 35, 601-609 Knauer, J., El-Madany, T. S., Zaehle, S., & Migliavacca, M. (2018). Bigleaf—An R package for the calculation of physical and physiological ecosystem properties from eddy covariance data. <em>PloS one</em>, <em>13</em>(8), e0201114.
DOI: 10.5517/ccdc.csd.cc24n2lh
title: CCDC 1985506: Experimental Crystal Structure Determination

description: Related Article: Ines F. M. Costa, Marina V. Kirillova, Vânia André, Tiago A. Fernandes, Alexander M. Kirillov|2021|Inorg.Chem.|60|14491|doi:10.1021/acs.inorgchem.1c01268
DOI: 10.5517/ccdc.csd.cc24n2jf
title: CCDC 1985504: Experimental Crystal Structure Determination

description: Related Article: Ines F. M. Costa, Marina V. Kirillova, Vânia André, Tiago A. Fernandes, Alexander M. Kirillov|2021|Inorg.Chem.|60|14491|doi:10.1021/acs.inorgchem.1c01268
DOI: 10.5517/ccdc.csd.cc24n2hd
title: CCDC 1985503: Experimental Crystal Structure Determination

description: Related Article: Ines F. M. Costa, Marina V. Kirillova, Vânia André, Tiago A. Fernandes, Alexander M. Kirillov|2021|Inorg.Chem.|60|14491|doi:10.1021/acs.inorgchem.1c01268
DOI: 10.5517/ccdc.csd.cc24n2kg
title: CCDC 1985505: Experimental Crystal Structure Determination

description: Related Article: Ines F. M. Costa, Marina V. Kirillova, Vânia André, Tiago A. Fernandes, Alexander M. Kirillov|2021|Inorg.Chem.|60|14491|doi:10.1021/acs.inorgchem.1c01268
DOI: 10.5281/zenodo.5570567
title: EDGAR-CORPUS

description: EDGAR-CORPUS: Billions of Tokens Make The World Go Round In the Proceedings of the Workshop on Economics and Natural Language Processing (ECONLP) - co-located with EMNLP 2021 We release EDGAR-CORPUS, a novel corpus comprising annual reports from all the publicly traded companies in the US spanning a period of more than 25 years. All the reports are downloaded, split into their corresponding items (sections), and provided in a clean, easy-to-use JSON format.
DOI: 10.5281/zenodo.5570566
title: EDGAR-CORPUS

description: EDGAR-CORPUS: Billions of Tokens Make The World Go Round In the Proceedings of the Workshop on Economics and Natural Language Processing (ECONLP) - co-located with EMNLP 2021 We release EDGAR-CORPUS, a novel corpus comprising annual reports from all the publicly traded companies in the US spanning a period of more than 25 years. All the reports are downloaded, split into their corresponding items (sections), and provided in a clean, easy-to-use JSON format.
DOI: 10.6084/m9.figshare.16814932
title: 600 JEOL ULT NMR Spectrometer Data

description: This dataset contains the spectrometer data for the temperature sensor and MAS sensor.
DOI: 10.6084/m9.figshare.16814740
title: 600 JEOL ULT NMR

description: This dataset contains the raw data collected with the 600 JEOL ULT NMR system.Samples:375 mM U-13C-Alanine dissolved in DNP Juice doped with: 1) no radical, 2) 10 mM AMUPol, 3) 10 mM TEMTriPol-1, 4) 14.3 mM Gd-DOTA, 5) 20 mM 4-Amino-TEMPO
DOI: 10.6084/m9.figshare.16807231
title: 400_Bruker_DNP

description: 375 mM U-13C-Alanine dissolved in DNP Juice with10 mM AMUPol/TEMTriPol-1. <br>Experiments are done with a 400 Bruker DNP at 100 K. MAS = 7 kHz.<br>H-C CP, direct 1H detection, 1H T1 and T1rho are detected without microwave irradiation. H-C CP with microwave on is used to check the DNP enhancement with AMUPol radical.
DOI: 10.6084/m9.figshare.14522781
title: ST-2021-Cobia-transcriptome.xlsx

description: Cobia (<i>Rachycentron canadum</i>) is a marine teleost species with great productive potential worldwide. However, the genomic information currently available for this species in public databases is limited. Such lack of information hinders gene expression assessments that might bring forward novel insights into the physiology, ecology, evolution, and genetics of this potential aquaculture species. In this study, we report the first <i>de novo</i> transcriptome assembly of <i>R. canadum</i> liver, improving the availability of novel gene sequences for this species. Illumina sequencing of liver transcripts generated 1,761,965,794 raw reads, which were filtered into 1,652,319,304 high-quality reads. De novo assembly resulted in 101,789 unigenes and 163,096 isoforms, with an average length of 950.61 and 1617.34 nt, respectively. Moreover, we found that 126,013 of these transcripts bear potentially coding sequences, and 125,993 of these elements (77.3%) correspond to functionally annotated genes found in six different databases. We also identified 701 putative ncRNA and 35,414 putative lncRNA. Interestingly, homologues for 410 of these putative lncRNAs have already been observed in previous analyzes with <i>Danio rerio</i>, <i>Lates calcarifer</i>, <i>Seriola lalandi dorsalis</i>, <i>Seriola dumerili</i> or <i>Echeneis naucrates</i>. Finally, we identified 7894 microsatellites related to cobia's putative lncRNAs. Thus, the information derived from the transcriptome assembly described herein will likely assist future nutrigenomics and breeding programs involving this important fish farming species.<i></i>
DOI: 10.6084/m9.figshare.14522781.v1
title: ST-2021-Cobia-transcriptome.xlsx

description: Cobia (<i>Rachycentron canadum</i>) is a marine teleost species with great productive potential worldwide. However, the genomic information currently available for this species in public databases is limited. Such lack of information hinders gene expression assessments that might bring forward novel insights into the physiology, ecology, evolution, and genetics of this potential aquaculture species. In this study, we report the first <i>de novo</i> transcriptome assembly of <i>R. canadum</i> liver, improving the availability of novel gene sequences for this species. Illumina sequencing of liver transcripts generated 1,761,965,794 raw reads, which were filtered into 1,652,319,304 high-quality reads. De novo assembly resulted in 101,789 unigenes and 163,096 isoforms, with an average length of 950.61 and 1617.34 nt, respectively. Moreover, we found that 126,013 of these transcripts bear potentially coding sequences, and 125,993 of these elements (77.3%) correspond to functionally annotated genes found in six different databases. We also identified 701 putative ncRNA and 35,414 putative lncRNA. Interestingly, homologues for 410 of these putative lncRNAs have already been observed in previous analyzes with <i>Danio rerio</i>, <i>Lates calcarifer</i>, <i>Seriola lalandi dorsalis</i>, <i>Seriola dumerili</i> or <i>Echeneis naucrates</i>. Finally, we identified 7894 microsatellites related to cobia's putative lncRNAs. Thus, the information derived from the transcriptome assembly described herein will likely assist future nutrigenomics and breeding programs involving this important fish farming species.<i></i>
DOI: 10.21223/culf3b/xrucnf
title: 01_Taxon sample.tab

description: :unav
DOI: 10.21223/culf3b/lyh8zz
title: 02_Silico DArT data.tab

description: :unav
DOI: 10.21223/culf3b/n7wu7q
title: 03_Data_dictionary.tab

description: :unav
DOI: 10.21223/culf3b/hq1cmo
title: 04_Data_dictionary.tab

description: :unav
DOI: 10.21223/culf3b/b5frj2
title: 03_Crossing data.tab

description: :unav
DOI: 10.6084/m9.figshare.3761562.v2011
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5281/zenodo.5570769
title: Molecular dynamics simulation data of stapled peptides

description: Molecular dynamics simulations for Axin and HIV peptides.
DOI: 10.5281/zenodo.5570768
title: Molecular dynamics simulation data of stapled peptides

description: Molecular dynamics simulations for Axin and HIV peptides.
DOI: 10.5517/ccdc.csd.cc269wxb
title: CCDC 2035302: Experimental Crystal Structure Determination

description: Related Article: Bin Cheng, Taimin Wang, Hongbin Zhai, Yixuan He, Xinping Zhang, Hui Li, Zijie Ding, Lizhe Feng, Haiyan Sun|2021|Synthesis|53|3578|doi:10.1055/a-1509-5175
DOI: 10.5517/ccdc.csd.cc26cmpx
title: CCDC 2036969: Experimental Crystal Structure Determination

description: Related Article: Xiaochen Tian, Xiaoli Zhang, Xiaohan Hou, Weiwu Ren, Xiaoyang Li, Fei Zhao, Houchao Tao, Yang Wang|2021|Asian J.Org.Chem|10|2385|doi:10.1002/ajoc.202100363
DOI: 10.5517/ccdc.csd.cc26cmqy
title: CCDC 2036970: Experimental Crystal Structure Determination

description: Related Article: Xiaochen Tian, Xiaoli Zhang, Xiaohan Hou, Weiwu Ren, Xiaoyang Li, Fei Zhao, Houchao Tao, Yang Wang|2021|Asian J.Org.Chem|10|2385|doi:10.1002/ajoc.202100363
DOI: 10.5517/ccdc.csd.cc26jwwj
title: CCDC 2042028: Experimental Crystal Structure Determination

description: Related Article: Rui-Li Wang, Shi-Kun Jia, Ya-Jun Guo, Yang Yi, Yuan-Zhao Hua, Hui-Jie Lu, Min-Can Wang|2021|Org.Biomol.Chem.|19|8492|doi:10.1039/D1OB01599K
DOI: 10.5517/ccdc.csd.cc26kn7p
title: CCDC 2042752: Experimental Crystal Structure Determination

description: Related Article: Xu Qiu, Lei Xu, Shian Ying, Xiyun Ye, Pei Xu, Bohan Wang, Dehua Hu, Dongge Ma, Yuguang Ma|2021|J.Mater.Chem.C|9|13697|doi:10.1039/D1TC03898B
DOI: 10.5517/ccdc.csd.cc26krdy
title: CCDC 2042850: Experimental Crystal Structure Determination

description: Related Article: Xu Qiu, Lei Xu, Shian Ying, Xiyun Ye, Pei Xu, Bohan Wang, Dehua Hu, Dongge Ma, Yuguang Ma|2021|J.Mater.Chem.C|9|13697|doi:10.1039/D1TC03898B