cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3518468
title: Appendix D. Summary of studies investigating relationships between the proportion of grassland bird nests parasitized by Brown-headed Cowbirds and edge proximity, patch size, or landscape composition.

description: Summary of studies investigating relationships between the proportion of grassland bird nests parasitized by Brown-headed Cowbirds and edge proximity, patch size, or landscape composition.
DOI: 10.6084/m9.figshare.3518468.v1
title: Appendix D. Summary of studies investigating relationships between the proportion of grassland bird nests parasitized by Brown-headed Cowbirds and edge proximity, patch size, or landscape composition.

description: Summary of studies investigating relationships between the proportion of grassland bird nests parasitized by Brown-headed Cowbirds and edge proximity, patch size, or landscape composition.
DOI: 10.6084/m9.figshare.3518465
title: Appendix E. Summary of studies used in investigation of the relationship between patch size and brood parasitism of grassland birds.

description: Summary of studies used in investigation of the relationship between patch size and brood parasitism of grassland birds.
DOI: 10.6084/m9.figshare.3518465.v1
title: Appendix E. Summary of studies used in investigation of the relationship between patch size and brood parasitism of grassland birds.

description: Summary of studies used in investigation of the relationship between patch size and brood parasitism of grassland birds.
DOI: 10.6084/m9.figshare.3518459
title: Appendix A. Maps of the park potential pika habitat and sampling frame with survey locations and results, and summary of occupancy survey results by park.

description: Maps of the park potential pika habitat and sampling frame with survey locations and results, and summary of occupancy survey results by park.
DOI: 10.6084/m9.figshare.3518459.v1
title: Appendix A. Maps of the park potential pika habitat and sampling frame with survey locations and results, and summary of occupancy survey results by park.

description: Maps of the park potential pika habitat and sampling frame with survey locations and results, and summary of occupancy survey results by park.
DOI: 10.6084/m9.figshare.3518456
title: Appendix B. Exploratory plots showing the relationship between site occurrence probabilities and site distances to nearest roads for each park unit.

description: Exploratory plots showing the relationship between site occurrence probabilities and site distances to nearest roads for each park unit.
DOI: 10.6084/m9.figshare.3518456.v1
title: Appendix B. Exploratory plots showing the relationship between site occurrence probabilities and site distances to nearest roads for each park unit.

description: Exploratory plots showing the relationship between site occurrence probabilities and site distances to nearest roads for each park unit.
DOI: 10.6084/m9.figshare.3518453
title: Supplement 1. OpenBUGS code for hierarchical multi-park distribution models.

description: File List OpenBUGScode.txt (MD5: )Description OpenBUGScode.txt – provides OpenBUGS model code for three Bayesian hierarchical site-occupancy models used to evaluate geographic variation in the climate-distribution relationships of the American pika across eight U.S. National Park study areas. Code can be copied from this file and pasted directly into OpenBUGS or into text editors for use with other software such as R.
DOI: 10.6084/m9.figshare.3518453.v1
title: Supplement 1. OpenBUGS code for hierarchical multi-park distribution models.

description: File List OpenBUGScode.txt (MD5: )Description OpenBUGScode.txt – provides OpenBUGS model code for three Bayesian hierarchical site-occupancy models used to evaluate geographic variation in the climate-distribution relationships of the American pika across eight U.S. National Park study areas. Code can be copied from this file and pasted directly into OpenBUGS or into text editors for use with other software such as R.
DOI: 10.6084/m9.figshare.3518450
title: Appendix A. List of species classified as "rarely grazed species" and hence not included in estimates of forage biomass.

description: List of species classified as "rarely grazed species" and hence not included in estimates of forage biomass.
DOI: 10.6084/m9.figshare.3518450.v1
title: Appendix A. List of species classified as "rarely grazed species" and hence not included in estimates of forage biomass.

description: List of species classified as "rarely grazed species" and hence not included in estimates of forage biomass.
DOI: 10.6084/m9.figshare.3518447
title: Appendix B. Parameters used to calculate the effect of black-tailed prairie dogs on daily cattle energy gain.

description: Parameters used to calculate the effect of black-tailed prairie dogs on daily cattle energy gain.
DOI: 10.6084/m9.figshare.3518447.v1
title: Appendix B. Parameters used to calculate the effect of black-tailed prairie dogs on daily cattle energy gain.

description: Parameters used to calculate the effect of black-tailed prairie dogs on daily cattle energy gain.
DOI: 10.6084/m9.figshare.3518444
title: Appendix C. Comparison of the daily energy balance of cattle foraging in the absence of black-tailed prairie dogs, vs. cattle foraging 50% of their time on prairie dog colonies and 50% of their time off prairie dog colonies.

description: Comparison of the daily energy balance of cattle foraging in the absence of black-tailed prairie dogs, vs. cattle foraging 50% of their time on prairie dog colonies and 50% of their time off prairie dog colonies.
DOI: 10.6084/m9.figshare.3518444.v1
title: Appendix C. Comparison of the daily energy balance of cattle foraging in the absence of black-tailed prairie dogs, vs. cattle foraging 50% of their time on prairie dog colonies and 50% of their time off prairie dog colonies.

description: Comparison of the daily energy balance of cattle foraging in the absence of black-tailed prairie dogs, vs. cattle foraging 50% of their time on prairie dog colonies and 50% of their time off prairie dog colonies.
DOI: 10.6084/m9.figshare.3518441
title: Appendix A. Five figures that illustrate model procedures, show model sensitivity analyses, and compare results to observations in published predator–prey interaction webs.

description: Five figures that illustrate model procedures, show model sensitivity analyses, and compare results to observations in published predator–prey interaction webs.
DOI: 10.6084/m9.figshare.3518441.v1
title: Appendix A. Five figures that illustrate model procedures, show model sensitivity analyses, and compare results to observations in published predator–prey interaction webs.

description: Five figures that illustrate model procedures, show model sensitivity analyses, and compare results to observations in published predator–prey interaction webs.
DOI: 10.6084/m9.figshare.3518438
title: Appendix A. Native bee species collected off of flowers at control and hedgerow sites (aerial net collections).

description: Native bee species collected off of flowers at control and hedgerow sites (aerial net collections).
DOI: 10.6084/m9.figshare.3518438.v1
title: Appendix A. Native bee species collected off of flowers at control and hedgerow sites (aerial net collections).

description: Native bee species collected off of flowers at control and hedgerow sites (aerial net collections).
DOI: 10.6084/m9.figshare.3518435
title: Appendix A. Time series of the numbers of male, female, fry, and juvenile mosquitofish (Gambusia holbrooki) in the experimental ponds.

description: Time series of the numbers of male, female, fry, and juvenile mosquitofish (Gambusia holbrooki) in the experimental ponds.
DOI: 10.6084/m9.figshare.3518435.v1
title: Appendix A. Time series of the numbers of male, female, fry, and juvenile mosquitofish (Gambusia holbrooki) in the experimental ponds.

description: Time series of the numbers of male, female, fry, and juvenile mosquitofish (Gambusia holbrooki) in the experimental ponds.
DOI: 10.6084/m9.figshare.3518432
title: Appendix B. Details of the relationships among starting sex ratios, mortality, and recruitment rates in the experimental ponds.

description: Details of the relationships among starting sex ratios, mortality, and recruitment rates in the experimental ponds.
DOI: 10.6084/m9.figshare.3518432.v1
title: Appendix B. Details of the relationships among starting sex ratios, mortality, and recruitment rates in the experimental ponds.

description: Details of the relationships among starting sex ratios, mortality, and recruitment rates in the experimental ponds.
DOI: 10.6084/m9.figshare.3518429
title: Appendix A. A figure displaying species-specific leaf area data used in the calculation of leaf-level transpiration.

description: A figure displaying species-specific leaf area data used in the calculation of leaf-level transpiration.
DOI: 10.6084/m9.figshare.3518429.v1
title: Appendix A. A figure displaying species-specific leaf area data used in the calculation of leaf-level transpiration.

description: A figure displaying species-specific leaf area data used in the calculation of leaf-level transpiration.
DOI: 10.6084/m9.figshare.3518426
title: Appendix A. Tables showing the sectors and activities considered, the pressure types generated by each sector, and the ecological characteristics of the ecosystem that are impacted by each pressure type, as well as short descriptions of sectors, activities, and pressure types.

description: Tables showing the sectors and activities considered, the pressure types generated by each sector, and the ecological characteristics of the ecosystem that are impacted by each pressure type, as well as short descriptions of sectors, activities, and pressure types.
DOI: 10.6084/m9.figshare.3518426.v1
title: Appendix A. Tables showing the sectors and activities considered, the pressure types generated by each sector, and the ecological characteristics of the ecosystem that are impacted by each pressure type, as well as short descriptions of sectors, activities, and pressure types.

description: Tables showing the sectors and activities considered, the pressure types generated by each sector, and the ecological characteristics of the ecosystem that are impacted by each pressure type, as well as short descriptions of sectors, activities, and pressure types.
DOI: 10.6084/m9.figshare.3518423
title: Appendix A. Information on environment dependent functions, species biomass data, and the type of ecological models used and details on hydro-climatic variables used for forcing.

description: Information on environment dependent functions, species biomass data, and the type of ecological models used and details on hydro-climatic variables used for forcing.
DOI: 10.6084/m9.figshare.3518423.v1
title: Appendix A. Information on environment dependent functions, species biomass data, and the type of ecological models used and details on hydro-climatic variables used for forcing.

description: Information on environment dependent functions, species biomass data, and the type of ecological models used and details on hydro-climatic variables used for forcing.
DOI: 10.6084/m9.figshare.3518420
title: Appendix A. Descriptive statistics of logbook data, tables showing estimates of the effect of prices on catch and numbers of fishermen, and figures showing the total catch by size class and cooperative and the effects of the four harvest scenarios under different conditions for initial harvest and new entrants.

description: Descriptive statistics of logbook data, tables showing estimates of the effect of prices on catch and numbers of fishermen, and figures showing the total catch by size class and cooperative and the effects of the four harvest scenarios under different conditions for initial harvest and new entrants.
DOI: 10.6084/m9.figshare.3518420.v1
title: Appendix A. Descriptive statistics of logbook data, tables showing estimates of the effect of prices on catch and numbers of fishermen, and figures showing the total catch by size class and cooperative and the effects of the four harvest scenarios under different conditions for initial harvest and new entrants.

description: Descriptive statistics of logbook data, tables showing estimates of the effect of prices on catch and numbers of fishermen, and figures showing the total catch by size class and cooperative and the effects of the four harvest scenarios under different conditions for initial harvest and new entrants.
DOI: 10.6084/m9.figshare.3518417
title: Appendix B. Detailed description of fish population model.

description: Detailed description of fish population model.
DOI: 10.6084/m9.figshare.3518417.v1
title: Appendix B. Detailed description of fish population model.

description: Detailed description of fish population model.
DOI: 10.6084/m9.figshare.3518414
title: Supplement 1. Code for age- and stage-based population models of Lutjanus peru and four harvest scenarios run under four different conditions.

description: File List Age_based_model.txt (md5: 79dcedfb16de00a82c617e05c87c17e7) Stage_based_model.txt (md5: 7c91d0b1b3d3b431aabd1dfd6c7d14ff) Harvest_scenarios_run1.txt (md5: 271ed1e5a78e7935caa79c6210add541) Harvest_scenarios_run2.txt (md5: 42d7068eba16cc61e286416c1173367f) Harvest_scenarios_run3.txt (md5: 194496c7ee948907c47f3679f1945a19) Harvest_scenarios_run4.txt (md5: ad140c55ec41b584af2f9c553dd0966c) Description Age_based_model.txt Matlab script file for the age-based model. Stage_based_model.txt Matlab script file for the stage-based model. Harvest_scenarios_run1.txt Matlab script file to simulate the four harvest scenarios with market effects acting on catch per trip. Harvest_scenarios_run2.txt Matlab script file to simulate the four harvest scenarios with market effects acting on catch per trip with higher initial harvest rates. Harvest_scenarios_run3.txt Matlab script file to simulate the four harvest scenarios with market effects acting on catch per trip and new entrants. Harvest_scenarios_run4.txt Matlab script file to simulate the four harvest scenarios with market effects acting on catch per trip and new entrants with higher initial harvest rates.
DOI: 10.6084/m9.figshare.3518414.v1
title: Supplement 1. Code for age- and stage-based population models of Lutjanus peru and four harvest scenarios run under four different conditions.

description: File List Age_based_model.txt (md5: 79dcedfb16de00a82c617e05c87c17e7) Stage_based_model.txt (md5: 7c91d0b1b3d3b431aabd1dfd6c7d14ff) Harvest_scenarios_run1.txt (md5: 271ed1e5a78e7935caa79c6210add541) Harvest_scenarios_run2.txt (md5: 42d7068eba16cc61e286416c1173367f) Harvest_scenarios_run3.txt (md5: 194496c7ee948907c47f3679f1945a19) Harvest_scenarios_run4.txt (md5: ad140c55ec41b584af2f9c553dd0966c) Description Age_based_model.txt Matlab script file for the age-based model. Stage_based_model.txt Matlab script file for the stage-based model. Harvest_scenarios_run1.txt Matlab script file to simulate the four harvest scenarios with market effects acting on catch per trip. Harvest_scenarios_run2.txt Matlab script file to simulate the four harvest scenarios with market effects acting on catch per trip with higher initial harvest rates. Harvest_scenarios_run3.txt Matlab script file to simulate the four harvest scenarios with market effects acting on catch per trip and new entrants. Harvest_scenarios_run4.txt Matlab script file to simulate the four harvest scenarios with market effects acting on catch per trip and new entrants with higher initial harvest rates.
DOI: 10.6084/m9.figshare.3518411
title: Appendix A. Detailed mathematical description of the model.

description: Detailed mathematical description of the model.
DOI: 10.6084/m9.figshare.3518411.v1
title: Appendix A. Detailed mathematical description of the model.

description: Detailed mathematical description of the model.
DOI: 10.6084/m9.figshare.3518408
title: Appendix B. Parameterization and conditioning.

description: Parameterization and conditioning.
DOI: 10.6084/m9.figshare.3518402
title: Appendix C. Further simulation details and supplementary results.

description: Further simulation details and supplementary results.
DOI: 10.6084/m9.figshare.3518402.v1
title: Appendix C. Further simulation details and supplementary results.

description: Further simulation details and supplementary results.
DOI: 10.6084/m9.figshare.3518399
title: Appendix A. Description of the conditional Gaussian process (GP) prior used in this study.

description: Description of the conditional Gaussian process (GP) prior used in this study.
DOI: 10.6084/m9.figshare.3518399.v1
title: Appendix A. Description of the conditional Gaussian process (GP) prior used in this study.

description: Description of the conditional Gaussian process (GP) prior used in this study.
DOI: 10.6084/m9.figshare.3518396
title: Supplement 1. Matlab software used in this study.

description: File List <b>Folder lists:</b><br> Data<br> GP(the linear model)<br> GP(the constant model)<br> GP(the S model)<br> GP(the lnS model)<br> Ricker(integral)<br> BH(integral) <b>Download all files at once -- </b>AllFilesAtOnce.zip (md5: b667a9b12b231ebbb2d06da38f6b117a) Description 'Data' contains a script file used for generating simulated data sets. 'GP(the linear model)' contains functions used for running the semiparametric Bayesian model with the linear mean function) to estimate log(alpha). The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'GP(the constant model)' contains functions used for running the semiparametric Bayesian model (with the constant mean function) to estimate log(alpha). The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'GP(the S model)' contains functions used for running the semiparametric Bayesian model (un-conditional model) to estimate log(alpha). The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'GP(GP(the lnS model))' contains functions used for running the semiparametric Bayesian model (un-conditional model) to estimate log(alpha) (developed in Munch et al. 2005). The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'Ricker(integral)' contains functions used for estimating log(alpha) using the Ricker model. The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'BH(integral)' contains functions used for estimating log(alpha) using the Beverton-Holt model. The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0.
DOI: 10.6084/m9.figshare.3518396.v1
title: Supplement 1. Matlab software used in this study.

description: File List <b>Folder lists:</b><br> Data<br> GP(the linear model)<br> GP(the constant model)<br> GP(the S model)<br> GP(the lnS model)<br> Ricker(integral)<br> BH(integral) <b>Download all files at once -- </b>AllFilesAtOnce.zip (md5: b667a9b12b231ebbb2d06da38f6b117a) Description 'Data' contains a script file used for generating simulated data sets. 'GP(the linear model)' contains functions used for running the semiparametric Bayesian model with the linear mean function) to estimate log(alpha). The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'GP(the constant model)' contains functions used for running the semiparametric Bayesian model (with the constant mean function) to estimate log(alpha). The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'GP(the S model)' contains functions used for running the semiparametric Bayesian model (un-conditional model) to estimate log(alpha). The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'GP(GP(the lnS model))' contains functions used for running the semiparametric Bayesian model (un-conditional model) to estimate log(alpha) (developed in Munch et al. 2005). The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'Ricker(integral)' contains functions used for estimating log(alpha) using the Ricker model. The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0. 'BH(integral)' contains functions used for estimating log(alpha) using the Beverton-Holt model. The outputs of this model is mean ('mloga') and variance ('vloga)' of the posterior distribution of 'log(alpha)', where 'alpha' is reproductive rate estimated at S=0.
DOI: 10.6084/m9.figshare.3518390
title: Appendix A. Detailed information on the process model developed and used in this paper, including derivation of the prior distributions for the process model parameters.

description: Detailed information on the process model developed and used in this paper, including derivation of the prior distributions for the process model parameters.
DOI: 10.6084/m9.figshare.3518390.v1
title: Appendix A. Detailed information on the process model developed and used in this paper, including derivation of the prior distributions for the process model parameters.

description: Detailed information on the process model developed and used in this paper, including derivation of the prior distributions for the process model parameters.
DOI: 10.6084/m9.figshare.3518387
title: Appendix B. Derivation of the autoregressive processes used in the paper.

description: Derivation of the autoregressive processes used in the paper.
DOI: 10.6084/m9.figshare.3518387.v1
title: Appendix B. Derivation of the autoregressive processes used in the paper.

description: Derivation of the autoregressive processes used in the paper.
DOI: 10.6084/m9.figshare.3518384
title: Appendix C. Some technical details on the particle Markov chain Monte Carlo (PMCMC) sampling approach used to conduct statistical inference.

description: Some technical details on the particle Markov chain Monte Carlo (PMCMC) sampling approach used to conduct statistical inference.
DOI: 10.6084/m9.figshare.3518384.v1
title: Appendix C. Some technical details on the particle Markov chain Monte Carlo (PMCMC) sampling approach used to conduct statistical inference.

description: Some technical details on the particle Markov chain Monte Carlo (PMCMC) sampling approach used to conduct statistical inference.
DOI: 10.6084/m9.figshare.3518381
title: Appendix D. Supplementary material describing the forcing data used in the case study.

description: Supplementary material describing the forcing data used in the case study.
DOI: 10.6084/m9.figshare.3518381.v1
title: Appendix D. Supplementary material describing the forcing data used in the case study.

description: Supplementary material describing the forcing data used in the case study.
DOI: 10.6084/m9.figshare.3518378
title: Appendix A. Conceptual shortcomings and inaccuracies in the inventory data used by L11.

description: Conceptual shortcomings and inaccuracies in the inventory data used by L11.
DOI: 10.6084/m9.figshare.3518378.v1
title: Appendix A. Conceptual shortcomings and inaccuracies in the inventory data used by L11.

description: Conceptual shortcomings and inaccuracies in the inventory data used by L11.
DOI: 10.6084/m9.figshare.3518375
title: Appendix A. Formulations for extensions of the models that include movement distance.

description: Formulations for extensions of the models that include movement distance.