cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/fwyk4tfrhg.1
title: Raw fragment counts of RNA sequencing from single oocytes

description: Pair end sequencing data were produced from five single oocytes following the procedures described in Biase (2021). Sequences were aligned with Hisat2 (Kim et al., 2015; Kim et al., 2019; Pertea et al., 2016), followed by filtering with samtools (Li et al., 2009) (remove unmapped reads, secondary alignments, failing of platform quality checks, PCR or optical duplicate) and removal of duplicates with the function ‘bammarkduplicates’ from biobambam (Tischler and Leonard, 2014). Sorting and indexing were done with Picard (http://broadinstitute.github.io/picard/). Finally, fragments were counted with ‘featurecounts’ (Liao et al., 2014) using the Ensembl (Flicek et al., 2014; Kinsella et al., 2011) bovine annotation as a guide.
DOI: 10.17632/jjcwt5436h.1
title: FourPhonon: An extension module to ShengBTE for computing four-phonon scattering rates and thermal conductivity

description: FourPhonon is a computational package that can calculate four-phonon scattering rates in crystals. It is built within ShengBTE framework, which is a well-recognized lattice thermal conductivity solver based on Boltzmann transport equation. An adaptive energy broadening scheme is implemented for the calculation of four-phonon scattering rates. In analogy with thirdorder.py in ShengBTE, we also provide a separate python script, Fourthorder.py, to calculate fourth-order interatomic force constants. The extension module preserves all the nice features of the well-recognized lattice thermal conductivity solver ShengBTE, including good parallelism and straightforward workflow. In this paper, we discuss the general theory, program design, and example calculations on Si, BAs and LiCoO_2.
DOI: 10.17632/xwjmd598pv.1
title: Data for “Training and transfer effects of working memory updating training in male abstinent long-term methamphetamine users”

description: Methamphetamine use is associated with cognitive effects, as cause or effect of the drug (re-)use. Enhancement of cognitive functioning, especially of executive functioning through targeted trainings might alleviate these effects. The present study assessed the effect of an adaptive working memory updating (WMU) training in male long-term methamphetamine inpatients (n=16) on various executive functions. Before and after training, the participants completed a number of tasks measuring WMU, interference control, response inhibition, and cognitive flexibility. The inpatients showed a clear performance improvement across training sessions. Relative to an active control group (n=16), the trained participants further showed a beneficial near-transfer effect in the form of enhanced performance on the non-trained WMU task. No evidence of training-induced effects on any of the other tasks was seen, reflecting the absence of far transfer. These results are similar to those seen in other cognitive training studies in both healthy and clinical populations. They provide evidence for a fundamental ability to learn and for applying the changed capacity or learned skill to similar, novel contexts, which may have clinical implications.

The data file concerns an SPSS data file containing pre-processed data. The data consist of each participant’s score on the outcome measure(s) for each of the tasks used (n-back, flanker, go/no-go, Stroop, two running memory, and switching tasks), which were used to perform repeated measures analyses of variance to analyze training progress, traditional and Bayesian analyses of covariance to assess the evidence for training-induced transfer effects, and a Spearman correlation analysis to assess to what extent individual variation in training progress is linked to progress on the WMU transfer task, as described in the target article. The meaning of each column in the data file is described under the tap Variable View --> Label. The raw data (in eprime format) on which the pre-processed data are base are available from the corresponding author upon request.
DOI: 10.17632/vkr7sd6fhb.1
title: RichardsFoam3: A new version of RichardsFoam for continental surfaces hydrogeology modelling

description: RichardsFoam3 is an updated version of the OpenFOAM® solver RichardsFoam, previously presented in “An open source massively parallel solver for Richards equation: Mechanistic modelling of water fluxes at the watershed scale” by L. Orgogozo, N. Renon, C. Soulaine, F. Hénon, S.K. Tomer, D. Labat, O.S. Pokrovsky, M. Sekhar, R. Ababou, M. Quintard (Comput. Phys. Commun. 185 (2014) 3358-3371, https://doi.org/10.1016/j.cpc.2014.08.004), and in the new version announcement “RichardsFOAM2: a new version of RichardsFOAM devoted to the modelling of the vadose zone” by L. Orgogozo (Comput. Phys. Commun. 196 (2015) 619-620, https://doi.org/10.1016/j.cpc.2015.07.009).

This new version includes improvements of memory handling and of on-the-fly control of computations, a better integration in the OpenFOAM® framework, simplifications of the coding of some expressions, as well as new advanced boundary conditions. All together these developments allow to enhance the ease of application of the code to continental surfaces hydrogeology modelling, its computational performances and its readability.

The description of the elements contained in this release may be found in the readMe file.

Please note that you may also find RichardsFoam3 on the hydrology page of the develop.openfoam.com interface:

https://develop.openfoam.com/Community/hydrology/

The previous version of this program (AEUF_v2_0) may be found at https://doi.org/10.1016/j.cpc.2015.07.009.
DOI: 10.17632/2wz5vt8kdt.1
title: RNA-Seq

description: mRNA expression profiling
DOI: 10.17632/shpby46jf5.1
title: Costs and revenues on organic and conventional farms

description: This dataset contains information about the cash flows of two agricultural farms: one based on organic farming practices and the other on conventional farming. Both farms are located in the municipality of Cruz Alta, Rio Grande do Sul, Brazil. The data were collected from records and controls of income and expenses provided by the farmers. The data comprise a four-year period for the organic system: 2016 to 2019; and five years for the conventional system: 2015/2016 to 2019/2020. The data are expressed in monetary units (R$) per unit of land of each farm (hectares). The data set is composed of fixed costs, variable costs, opportunity costs, revenues, and depreciation, as well as financial indicators, such as unit contribution margin, profit, net profit, profitability, and break-even point.
DOI: 10.17632/4w8pbpwy56.1
title: MyDatabase

description: Meu espaço
DOI: 10.17632/53v5twv757.2
title: Pre-fire climate and snow drought explain most of western U.S. burned area variability

description: Data presented in the manuscript: "Pre-fire climate and snow drought explain most of western U.S. burned area variability" by Abolafia-Rosenzweig, R., He, C., and Chen, F. Details are provided in README.docx. 

Corresponding author: Ronnie Abolafia-Rosenzweig (abolafia@ucar.edu)
DOI: 10.17632/rrbrt3y53z.2
title: Mendeley Supplementary Table I AFX

description: Sample Search Strategy used to gather data. Database - Ovid MEDLINE(R) and Epub Ahead of Print, In-Process & Other Non-Indexed Citations and Daily 1946 to August 26, 2020. Date of search- March 18, 2020
DOI: 10.17632/923hy8vwhd.3
title: Mendeley Supplementary Fig 1 AFX

description: Figure 1. Atypical fibroxanthoma. Study inclusion flow diagram
DOI: 10.17632/y4kmnb3tvx.2
title: E.denticulatum quant BUP

description: MaxQuant output files (txt folder) from quantitative bottom-up proteomics analysis of two pilot-scale hot-water extracts from E. denticulatum, described in the manuscript "Proteomic characterization of pilot scale hot-water extracts from the industrial carrageenan red seaweed Eucheuma denticulatum"
Extract A is labelled "A-013-05e" and Extract B "A-022-05e". Data is organized as exploratory phase (unspecific analysis with 1%, 5%, and 10% FDR as well as semi-specific analysis with 1% and 5% FDR) and as final phase (for tryptic and semi-specific analysis with optimized search parameters). Raw MS data are available upon request.
Repository also contains the reference protein database (in .fasta format) as well as qRNAseq data.
DOI: 10.17632/ct3nz7k29x.1
title: DLQI and LPPAI study 

description: Participants' full data and statistical results.
DOI: 10.17632/829g8pwg4s.1
title: Supplementary material for "Epidemiological association between alopecia areata and celiac disease: a meta-analysis"

description: Supplemental data for "Epidemiological association between alopecia areata and celiac disease: a meta-analysis"
Supplemental Figure 1. Flow diagram of the included studies
Supplemental Table I. Database search strategy used for meta-analysis
Supplemental Table II. The New-castle Ottawa Scale of each study included in meta-analysis.
DOI: 10.17632/cy34mh68j9.2
title: Mexican Emotional Speech Database (MESD)

description: The Mexican Emotional Speech Database (MESD) provides single-word utterances for anger, disgust, fear, happiness, neutral, and sadness affective prosodies with Mexican cultural shaping. The MESD has been uttered by both adult (male and female) and child non-professional actors: 3 female, 2 male, and 6 child voices are available (female mean age ± SD = 23.33 ± 1.53, male mean age ± SD = 24 ± 1.41, and children mean age ± SD = 9.83 ± 1.17). Words for emotional and neutral utterances come from two corpora: (corpus A) composed of nouns and adjectives that are repeated across emotional prosodies and types of voice (female, male, child), and (corpus B) which consists of words controlled for age-of-acquisition, frequency of use, familiarity, concreteness, valence, arousal, and discrete emotion dimensionality ratings. Particularly, words from corpus B are nouns and adjectives which subjective age of acquisition is under 9-year-old. Neutral-uttered words have valence and arousal ratings strictly greater than 4, but lower than 6 (in a 9-point-scale). Emotional-uttered words have valence and arousal ratings ranging from 1 to 4, or from 6 to 9. Furthermore, ratings for discrete emotional dimension greater than 2.5 (on a 5-point scale) allowed the emotional utterance with the corresponding anger, disgust, fear, happiness, or sadness prosody. Finally, words from corpus B were selected so that emotional prosodies do not differ as regards frequency of use, familiarity, and concreteness dimensions. 

The audio recordings took place in a professional studio with the following materials: (1) a Sennheiser e835 microphone with a flat frequency response (100 Hz to 10 kHz), (2) a Focusrite Scarlett 2i4 audio interface connected to the microphone with an XLR cable and to the computer, and (3) the digital audio workstation REAPER (Rapid Environment for Audio Production, Engineering, and Recording). Audio files were stored as a sequence of 24-bit with a sample rate of 48000Hz.
 
Utterances are shared as 864 audio files in WAV format that are named according to the following pattern:  <emotion>_<type of voice>_<word corpus>_<word>. 
<emotion>	        Anger, Disgust, Fear, Happiness, Neutral, or Sadness
<type of voice>	F: female, M: male, C: child
<word corpus >	A: corpus A, B: corpus B
<utterance word >	Entire word in lowercase letters

The MESD seems to be the first set of single-word emotional utterances that includes both adult and child voices for the Mexican population. 

If you use this dataset for your work, please cite the related paper:

M. M. Duville, L. M. Alonso-Valerdi, and D. Ibarra-Zarate, “The Mexican Emotional Speech Database (MESD): elaboration and assessment based on machine learning,” 43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, p. 4, 2021.
DOI: 10.17632/vtjhth7wyg.1
title: Survey of Lifetime Income Expectations (Kellogg MBA students, 2004)

description: For this study I administered a survey of 64 MBA students of the Kellogg Graduate School of Business in November of 2004, asking students about their expectation of their median earnings profile and a set of 4 other percentiles around their median at the horizon of 1 year, 5 years, and 15 years in the future after their graduation, both in the case of completing their degree and for the hypothetical scenario in which students had never enrolled in a post-graduate education program. Therefore this study can measure students' expectations both of the short-term gains in earnings from their degree and the increased gains to experience, as well as the perceived risk of students' earnings profile.

    The survey was implemented on a random sample of 64 students from the 960 student population of the Kellogg MBA program, with individual interviews of students inside the Kellogg Business School building in Evanston, during November of 2004. The characteristics of the 64 respondents in my sample are fairly similar to the overall population of students at Kellogg business school. The median student's age in my sample is 28 and 90% of the students have age 32 or lower. There are no students younger than 25 and all students were previously employed before their MBA, with the median student having 5 years of previous work experience. Both the survey data and its complete questionnaire are published with this article in anonymized form with a total of 198 variables. Readers can also refer to Madeira (2020) for a more complete description of the survey and its results. The survey was structured as follows:
    1) Background questions: Respondents report on their gender, age, previous education and work experience, last yearly pre-tax work income, GMAT scores, reasons for taking the MBA, and percent chances of doing each field major at Kellogg.
    2) Expectations regarding the nature of the 1st job: Subjective expectations of the most likely country of work, business areas, and job functions of the 1st work obtained by the student after graduation.
    3) Earnings expectations under counterfactual scenarios: Subjective expectations of the future pre-tax work income for 1, 5 and 15 years after the completion of their degree, for both counterfactual scenarios in which they have completed their MBA degree and in which they had followed their regular professional career without any additional post-graduate degree.
    4) Beliefs about last year's income distributions for the 2003 and 1998 MBA classes, which represent, respectively, the classes that graduated one and 5 years before the interview.
DOI: 10.17632/yfgndyv8bh.1
title: Adaptive translational pausing is a hallmark of the cellular response to severe environmental stress. 

description: Raw imaging and gel data
DOI: 10.17632/rxvd36tkvp.2
title: Puntos de vista de los profesores sobre la implementación del e-learning durante la pandemia de COVID-19

description: Durante el periodo de confinamiento por la pandemia de COVID-19 las técnicas del proceso de enseñanza – aprendizaje han tenido que cambiar de una forma drástica, pasando a la modalidad virtual. En este sentido, esta encuesta busca identificar cómo se utilizan las Tecnologías de la Información y la Comunicación (TIC) y las barreras que les impiden dar a los docentes ofrecer su mejor desempeño. 
La información que se proporcione en esta encuesta será completamente confidencial y usada únicamente para fines académicos y científicos que permitan generar estrategias que ayuden a facilitar el uso de las TIC en su entorno laboral y mitigar las barreras que impiden el buen desempeño.
DOI: 10.17632/x32kgssf89.2
title: Dataset for paper: MACHINERY-ASSOCIATED LEAN MANUFACTURING TOOLS AND THEIR EFFECT ON SUSTAINABILITY: THE CASE OF MEXICAN MAQUILADORAS 

description: This data set is in SAV extension to be open with SPSS software.
Contain 239 responses to a questionnaire from Mexican maquiladora.
DOI: 10.17632/xy26gg3cns.1
title: Data for incarcerated hernia during COVID 19 

description: Data for incarcerated hernia during COVID 19
DOI: 10.17632/86fxmytx4j.1
title: Secondary School Teachers Psychological Status and Competencies in E-Teaching During Covid-19

description: RESEARCH OBJECTIVE
1.	To determine teachers’ psychological status (stress, anxiety, depression) during the Covid-19 outbreak. 
2.	To determine teachers’ competencies in e-teaching (application, monitoring, evaluation). 
3.	To determine examine teachers’ working motivation.
4.	To determine the relationship between secondary school teachers’ psychological status and competencies in e-teaching during Covid-19.

Overall, the study shows that e-teaching during Covid-19 pandemic is promising though every teacher is caught by surprise and overwhelmed. Though they face stress, anxiety and depression but it is at moderate level, and they are not deterred from fulfilling their responsibility. Despite of that e-teaching is conducted effectively by teachers at moderate level on the higher end due to team spirit and cooperation among teachers. It is also driven by strong motivation among teachers to carry out their responsibilities. Last but not least, a negative correlation was determined between Malaysia secondary school teachers’ psychological status and competencies in e-teaching during Covid-19.
DOI: 10.17632/j5gsvv4jw3.3
title: Assessment of Households' Spatial Access to Water Points in Dodoma Rural Wards

description: Rural Wards of Dodoma Urban District shapefile was extracted from the 2012 Wards shapefile obtained from the National Bureau of Statistics (NBS) of Tanzania downloaded at https://www.nbs.go.tz/index.php/en/census-surveys/gis/386-2012-phc-shapefiles-level-three. The shapefile of the randomly sampled nine Rural Wards studied in this study was extracted from the Rural Wards of Dodoma Urban District shapefile. The household size of each of the nine Rural Wards was extracted from the 2012 Population and Housing Census report of the NBS [24]. Waterpoint data were derived from the Directorate of Rural Water Supply (DRWS) of Tanzania through the Government Basic Statistics Portal. The catchment areas were generated in this study using water point data as input and buffer tool in QGIS 3.10.5 software. Households shapefile was generated by extracting households within catchment areas from Google Earth through digitization. Households folder contain household shapefile containing calculated spatial accessibility indices (Ai). Water point folder contain water point shapefile with fields containing water points capacity (Sj), water  demand (Dj) and service (Rj).
DOI: 10.17632/gcxcbrj7c6.1
title: Features of Image To Audio Converted Tomato Leaf (Bacterial Spot and Healthy Leaf ) Dataset

description: This csv format dataset consists of audio features of the image dataset converted from from tomato leaf disease(bacterial spot) and healthy leaf images to audio dataset . This process of converting raw image data into sound data(audio format) is done with Audacity. Then the features from the audio dataset are extracted from pyAudioAnalysis  and stored in csv format. This dataset consists of only the features which are already selected using feature selection algorithms.
DOI: 10.17632/rp8xbgdykj.1
title: Design and implementation of high-speed Additive manufacturing system using pagewide diode laser module

description: Tensile test of PA 12 printed sample by page wide diode laser printer
DOI: 10.17632/jk4gb8t59b.1
title: IT City Chowk to Kurali Chandigarh Road EIA Package-II

description: IT City Chowk to Kurali Chandigarh Road EIA Package-II
DOI: 10.17632/w3s6jbx2tk.2
title: ONTOLOGÍA CRÍTICA

description: ...
DOI: 10.17632/sr5gzbsf9p.2
title: Multi-temporal photographic dataset of glacier changes in the Rupal Valley, Nanga Parbat, north-western Himalaya

description: This dataset presents multi-temporal glacier photography from the Rupal Valley, south of Nanga Parbat in the north-western Himalaya. The elevation of viewpoints of re-photographic surveys ranges between 2940 and 5370 m a.s.l. The research is based on the hypothesis that repeat photography of these mountain glaciers allows for a longer monitoring period than remote sensing data as historical metric photographs from the years 1934, 1958, and 1987 are available. All relevant historical photographs showing glacier aspects taken during scientific expeditions have been collected from archives and repeated from the same viewpoints during several surveys between 1992 and 2010. Prints of the selected photographs were taken to the field in order to identify the exact viewpoints. The camera was always mounted on a tripod for careful selection of the view angle and frame. This multi-temporal dataset allows for a detailed visual assessment of glacier fluctuations, changes in glacier snout positions, ice volumes, and debris cover over a period of seven to eight decades. It offers insights for a better understanding of glacier changes in this prominent Himalayan mountain region and can serve as a baseline for further studies. The dataset provides baseline data for a recently published article (Nüsser and Schmidt, 2021) with original archival material and replicated glacier photography.

Publication:

Nüsser, M., Schmidt, S. 2021. Glacier changes on the Nanga Parbat 1856-2020: A multi-source retrospective analysis. Science of the Total Environment 785, 147321. doi: 10.1016/j.scitotenv.2021.147321
DOI: 10.17632/rx9x4vbs2y.1
title: BRO_-_Kurkuti-Ghamsali-Niti_Road_UK

description: BRO_-_Kurkuti-Ghamsali-Niti_Road_UK
DOI: 10.17632/gxbf8zf324.1
title: BRO_Ditte – Dimme – Migging_Road

description: BRO_Ditte – Dimme – Migging_Road
DOI: 10.17632/7swkchn88z.1
title: BRO_-_Kurkuti-Ghamsali-Niti_Road_UK (2)

description: BRO_-_Kurkuti-Ghamsali-Niti_Road_UK (2)
DOI: 10.17632/8x5ztvtpgg.1
title: BRO_Geldung – Niti Pass_Road_UK2

description: BRO_Geldung – Niti Pass_Road_UK2
DOI: 10.17632/p5nhvv4ndh.1
title: BRO_Geldung – Niti Pass_Road_UK

description: BRO_Geldung – Niti Pass_Road_UK
DOI: 10.17632/3xkrgm25t9.1
title: BRO_Rishi-Rongli-Kupup Road

description: BRO_Rishi-Rongli-Kupup Road
DOI: 10.17632/4d6stj3w34.1
title: Research 674

description: Research
DOI: 10.17632/fcf77htn8m.1
title: LINF_190005100

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/vpfwyznvpm.1
title: Technical/economic feasibility of the adequacy of a fully renewable power system: the case study of the Sardinia island

description: The dataset provides input data of the mixed zonal/nodal LP procedure developed for the feasibility study. Also data and results related to "Case6" and "Case 24" case studies are reported.
- Hourly hydro inflow data are provided as daily average flow rates, expressed in m3/h: for a given day, hourly flow rates are obrtained considering them constant during the day and equal to the daily average value. Hourly flow rates are then converted from m3/h to hm3.
- For case6 and case24 hourly load coefficients are provided. Hourly nodal loads are obtained by multiplying for each bus the bus load in the base case file and the hourly load coefficients.
- For the Sardinia island case, hourly aggregate loads are provided. Hourly load coefficients are obtained by dividing hourly aggregate loads by the aggregate load in the base case file. Hourly nodal loads are then obtained in the same way of case6 and case24.
- For the Sardinia island case, nodes are grouped into zones according to the ‘area’ values reported in the bus data of ‘Sardinia.m’.
- For the Sardinia island case, the list of nodes where installation of PV plants and onshore wind plants is not allowed is reported in the file 'List_of_nodes_with_PV_and_W_generation_not_allowed.xlsx'. 
- In all cases, hourly dispatch and installed generation are in MW
DOI: 10.17632/bm57cmg73v.1
title: LINF_190005200

description: histone H2B
Leishmania infantum (strain JPCM5)
DOI: 10.17632/pnpwtrf4fw.1
title: LINF_190005300

description: histone H2B
Leishmania infantum (strain JPCM5)
DOI: 10.17632/h4m46v2573.1
title: Rajasthan_Report_EIA_WB

description: Rajasthan_Report_EIA_WB
DOI: 10.17632/4c466grm5x.1
title: Chapter_9_Jharkhand_IEE_Report

description: Chapter_9_Jharkhand_IEE_Report