cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/h8hmkcf6gk.1
title: Host dysosmia in SARS-CoV-2 infection

description: The respiratory condition COVID-19 arises in a human host upon the infection with SARS-CoV-2, a coronavirus that was first acknowledged in Wuhan, China, at the end of December 2019 after its outbreak of viral pneumonia. The full-blown COVID-19 can lead, in susceptible individuals, to premature death because of the massive viral proliferation, hypoxia, misdirected host immunoresponse, microthrombosis, and drug toxicities. Alike other coronaviruses, SARS-CoV-2 has a neuroinvasive potential, which may be associated with early neurological symptoms. In the past, the nervous tissue of patients infected with other coronaviruses was shown to be heavily infiltrated. Patients with SARS-CoV-2 commonly report dysosmia, which has been related to the viral access in the olfactory bulb. However, this early symptom may reflect the nasal proliferation that should not be confused with the viral access in the central nervous system of the host, which can instead be allowed by means of other routes for spreading in most of the neuroanatomical districts. The dataset was used to write the hypothesis "Disentangling the Hypothesis of Host Dysosmia and SARS-CoV-2: The Bait Symptom That Hides Neglected Neurophysiological Routes", which was published by the Journal Frontiers in Physiology in 2020.
DOI: 10.17632/h5y24hzrgd.1
title: Malnutrition in SARS-CoV-2 infected patients

description: An outbreak of viral pneumonia was reported in Wuhan, China, at the end of December 2019, and subsequent sample analyses discovered the involvement of a new strain of coronavirus (SARS-CoV-2), which belongs to the same family of single-stranded enveloped RNA viruses that caused the emergences of SARS-CoV in 2003 and MERS-CoV in 2012. Symptoms of COVID-19 (SARS-CoV-2 syndrome) may occur within 2–14 days after exposure and can lead to difficulties in cilium beating of airway cells and to alveolar damage. Infected patients experience mild to severe manifestations, such as fever, dry cough, dyspnoea, abdominal pain, and diarrhea. Most cases resolve rapidly, but the infection can still be fatal in about 3% of cases. Much like MERS or the coronavirus that infects pigs, the enteric affections can be prominent, possibly leading to the loss of absorptive potential. Just a few weeks after its discovery, the COVID-19 has been considered a serious worldwide threat. Preliminary data suggest that male older adults and subjects with immune dysfunctions might be more susceptible to the worse viral disease, but there is a need to further investigate the virulence factors. One of the factors most discussed is the malnutritional status of the host, but most of the beliefs are anecdotal. The dataset was used to write the article "The Malnutritional Status of the Host as a Virulence Factor for New Coronavirus SARS-CoV-2", which was published by the Journal Frontiers in Medicine in 2020.
DOI: 10.17632/fyk55nh2hf.1
title: Replication files for "Anticipation effects of protectionist U.S. trade policies"

description: The replication folder contains all codes and data needed to replicate the empirical results in "Anticipation effects of protectionist U.S. trade policies". Disclaimer: The views expressed in the paper, its appendices, and the associated computer codes are those of the author and do not necessarily reflect the views of the Deutsche Bundesbank or the Eurosystem. All remaining errors are my own.
DOI: 10.17632/zckcb8strz.1
title: Size and shape effects on the strength of platinum nanoparticles

description: Processed data of the "Size and shape effects on the strength of platinum nanoparticles" paper
DOI: 10.17632/2skvdrf3rt.1
title: OrthoFinder analysis of nematode secretomes

description: The complex composition of parasite excretory/secretory proteins confounds the ability to identify those related to virulence and hence the success of an infection. Comparative analysis between ecologically diverse species may help prioritize proteins that play essential roles in parasitism for functional studies and may contribute to our understanding of the molecular basis of host-parasite specificity. The orthology analysis allowed to re-analyze all collected data simultaneously with the same tool, and resulted in a sequence-based clustering, independently of their initial annotation, reported in individual papers. We used the tool OrthoFinder (Emms DM, Kelly S. OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy. Genome Biol. 2015 Aug 6;16:157).
DOI: 10.5066/p9cbdu9d
title: Presence/Absence of Myxobolus inornatus, Aeromonas spp., and Flavobacterium spp. in Young-of-the-Year Smallmouth Bass with Fluorescence In Situ Hybridization

description: Histopathological assessments of young-of-the-year smallmouth bass (YOY SMB) in the Susquehanna River drainage identified a high prevalence of the myxozoan Myxobolus inornatus. This myxozoan infects the connective tissue of the muscle below the skin but is sometimes observed in the esophagus and buccal cavity. In some instances, shallow infections cause breaks in the skin which could increase the chance of opportunistic bacterial infections. Several microbial pathogens including Flavobacterium columnare, Aeromonas spp. and largemouth bass virus (LMBV) have also been cultured from clinically diseased YOY. A multiplex fluorescence in situ hybridization (FISH) assay was developed to determine potential co-localization of M. inornatus, Flavobacterium spp., and Aeromonas spp. infections. With FISH, 75% of YOY SMB exhibited M. inornatus infections, 10% had Aeromonas spp. infections, and 5% had Flavobacterium spp. infections, while 3% had coinfections with both bacterial species and M. inornatus. The results of the multiplex FISH assay revealed a low occurrence of coinfections of Flavobacterium spp. and/or Aeromonas spp. with M. inornatus in randomly sampled individuals.
DOI: 10.17632/6m3yhx4ssw.1
title: Fully Geant4 compatible package for the simulation of Dark Matter in fixed target experiments

description: We present the package for the simulation of DM (Dark Matter) particles in fixed target experiments. The most convenient way of this simulation (and the only possible way in the case of beam-dump) is to simulate it in the framework of the Monte-Carlo program performing the particle tracing in the experimental setup. The Geant4 toolkit framework was chosen as the most popular and versatile solution nowadays. Specifically, the package includes the codes for the simulation of the processes of DM particles production via electron and muon bremsstrahlung off nuclei, resonant in-flight positron annihilation on atomic electrons and gamma to ALP (axion-like particles) conversion on nuclei. Four types of DM mediator particles are considered: vector, scalar, pseudoscalar and axial vector. The total cross sections of bremsstrahlung processes are calculated numerically at exact tree level (ETL). The code handles both the case of invisible DM decay and of visible decay into e^+ e^- (μ^+ μ^- for Z', γγ for ALP). The proposed extension implements native Geant4 application programming interfaces (API) designed for these needs and can be unobtrusively embedded into the existing applications. As an example of its usage, we discuss the results obtained from the simulation of a typical active beam-dump experiment. We consider 5 x 10^12 100 GeV electrons impinging on a lead/plastic heterogeneous calorimeter playing a role of an active thick target. The expected sensitivity of the experiment to the four types of DM mediator particles mentioned above is then derived.
DOI: 10.17632/4npf3sx6ng.1
title: Supplementary Tables and Figures: Trichoscopic findings in syphilitic alopecia: A Systematic Review

description: Supplementary tables and figures for 'Trichoscopic findings in syphilitic alopecia: A Systematic Review'.
DOI: 10.17632/sjtp7bb33t.1
title: BSMPT v2 a tool for the electroweak phase transition and the baryon asymmetry of the universe in extended Higgs Sectors

description: We present the C++ code BSMPT v2 which is an extension of the previous code BSMPT for the calculation of the strength of the electroweak phase transition in extended Higgs sectors. The new version BSMPT v2 includes the features of BSMPT and extends the already implemented models (the 2-Higgs-Doublet model (2HDM) in its CP-conserving and CP-violating versions and the Next-to-2HDM) by the Complex Singlet Extension of the Standard Model (CxSM). The major upgrade is the implementation of the computation of the baryon asymmetry of the Universe for the CP-violating 2HDM (C2HDM), which is performed in two different approximations. These changes and further smaller modifications are described in this manual. Additionally, a detailed explanation of the procedure for the implementation of new models is given, which has also changed with respect to the previous version.
DOI: 10.17632/c45776hm2w.1
title: The effects on water resources in a floodplain in JJJ region

description: The effects on water resources in Yongding river floodplain, the economic data based on yearbooks of Beijing, Tianjin and Hebei province and water resources reports of Beijing, Tianjin and Hebei.
DOI: 10.17632/hkwbf6nrgx.1
title: Bayesian model updating and class selection of a wing-engine structure with nonlinear connections using nonlinear normal modes

description: Data associated with the paper entitled "Bayesian model updating and class selection of a wing-engine structure with nonlinear connections using nonlinear normal modes" published in Mechanical Systems and Signal Processing. The archive contains the backbone curves associated with the first two NNMs of the structure. Backbone curves were experimentally measured using control-based continuation and a single input excitation. The archive also contains the Matlab post-processing file necessary to reproduce Figures 4 and 5 of the paper (i.e the figures associated with experimental data).
DOI: 10.17632/sb38dsw6vm.2
title: 6DV2S_II_A

description: 1. The file SolutionData.doc contains the sets of solutions for the cases analysed in the manuscript. 2. The notebook 4Bar3Points_6DV2S_II_A.nb created in Wolfram Mathematica 8.0 is the code of the algorithm 6DV2S_II for determining the mechanism dimensions from output data of the algorithm 6DV2S_II and for the results visualisation. 3. The pdf file of this notebook is also available. 4. The zip file SupplFigs contains the figures of the spring extensions and the rates of the spring extensions for all the cases except for I.A.1. The name of the figure addresses the adequate case.
DOI: 10.17632/bshhwy3czd.2
title: Low-Cost Residential Air Quality Device using Ultraviolet Germicidal Irradiation (UVGI) light

description: Many New Zealand residential dwellings suffer from dampness and fungi during the winter, which can cause respiratory health problems. This can be due to poor insulation and ventilation, and the situation worsens when residents cannot afford to heat the dwelling. The main aim of this paper is to modify an existing dehumidifier so that it can remove moisture, heat the living space and reduce fungi growth and bacteria. To achieve that, we installed ultraviolet germicidal lights (UVGI) in an existing dehumidifier with a total cost of NZD 213.76. The UVGI lights are known to be efficient in destroying the DNA of fungi and bacteria. The results show that the device reduced the fungi growth and did increase the room temperature because the dehumidifier captured two litres of water over 24 hours of testing. Therefore, our proposed low-cost device does improve the indoor air quality (IAQ) in the living space. The design files for the modified dehumidifier will be included here.
DOI: 10.15468/5eaxt9
title: Brachiopods from Late Jurassic-Early Cretaceous hydrocarbon seep deposits, central Spitsbergen, Svalbard

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sandy, Michael R., Hryniewicz, Krzysztof, Hammer, Øyvind, Nakrem, Hans Arne, Little, Crispin T. S. (2014): Brachiopods from Late Jurassic-Early Cretaceous hydrocarbon seep deposits, central Spitsbergen, Svalbard. Zootaxa 3884 (6): 501-532, DOI: http://dx.doi.org/10.11646/zootaxa.3884.6.1
DOI: 10.17632/km2n2p6j6x.1
title: LINF_170007100

description: elongation factor 1-alpha Leishmania infantum (strain JPCM5)
DOI: 10.17632/dxcdgrpnh6.1
title: Articles on Income Inequality

description: The dataset includes bibliographic information of 7,505 articles of the topic of Income Inequality in the Scopus database
DOI: 10.17632/yhd2j7ddxc.3
title: Clip #22

description: Road footage recorded using Logitech C525 webcam on Perodua Kancil 660 EX. The recorded steering wheel angle and vehicle speed are in degree and km/h, respectively. For synchronization, road footage, steering wheel angle, and vehicle speed data are recorded in 1/30 second step size.
DOI: 10.17632/2m6zttn7yj.1
title: miRNA in peripheral and coronary serum of CAD and acute MI patients

description: Background: We aimed to identify circulating miRNA associated with chronic coronary artery disease (CAD) and myocardial infarction (MI) in peripheral blood vessels and coronary arteries proximal to an occluded culprit area. Methods: Patients having chronic CAD, acute MI either with or without ST segment elevation (STEMI and NSTEMI, respectively), and control patients with no previous or current CAD, were recruited to the study. Blood samples were collected during coronary catheterization procedure from the peripheral and from the culprit coronary artery. Serum miRNA was sequenced, and miRNA identified as differentially expressed was validated by quantitative-real-time PCR. Results: Sequencing analysis revealed miR-483-5p as differentially expressed in STEMI patients versus controls. Further qPCR experiment demonstrated a significant downregulation of miR-483-5p in peripheral samples of CAD and MI patients compared with controls (1.1 vs.2.6, respectively). In coronary samples, miR-483-5p was reduced only in chronic CAD, whereas its expression in MI patients was similar to controls. A ROC analysis for association of peripheral serum miR-483-5p with chronic CAD demonstrated an area under the curve of 0.722. Conclusion: miR-483-5p is differentially expressed in chronic CAD and MI and has local effects in culprit artery, suggesting it as an important player in CAD and a potential biomarker.
DOI: 10.6084/m9.figshare.16410502.v1
title: Determining structure and action mechanism of LBF14 by molecular simulation

description: The recently discovered, membrane–active peptide LBF14 contains several non–proteinogenic amino acids and is able to transform vesicles into tubule networks. The exact membrane interaction mechanism and detailed secondary structure are yet to be determined. We performed molecular dynamics simulations of LBF14 and let it fold de novo into its ensemble of native secondary structures. Histidine protonation state effects on secondary structure were investigated. An MD simulation of the peptide with a lipid bilayer was performed. Simulation results were compared to circular dichroism and electron paramagnetic resonance data of previous studies. LBF14 contains a conserved helical section in an otherwise random structure. Helical stability is influenced by histidine protonation. The peptide localized to the polar layer of the membrane, consistent with experimental results. While the overall secondary structure is unaffected by membrane interaction, Ramachandran plot analysis yielded two distinct peptide conformations during membrane interaction. This conformational change was accompanied by residue repositioning within the membrane. LBF14 only affected the local order in the membrane, and had no measurable effect on pressure. The simulation results are consistent with the previously proposed membrane interaction mechanism of LBF14 and can additionally explain the local interaction mechanism. Communicated by Ramaswamy H. Sarma
DOI: 10.34740/kaggle/dsv/2551501
title: COVID Vaccination in World (updated daily)
DOI: 10.15468/tfanx2
title: A new genus to accommodate three skinks currently assigned to Menetia (Lacertilia: Scincidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Couper, Patrick J., Hoskin, Conrad J. (2014): A new genus to accommodate three skinks currently assigned to Menetia (Lacertilia: Scincidae). Zootaxa 3884 (6): 597-599, DOI: http://dx.doi.org/10.11646/zootaxa.3884.6.8
DOI: 10.25402/imt.16411299
title: IMT-2021-0052 Supplementary Data - Supplementary Material: Immune cells and signatures characterize tumor microenvironment and predict outcome in ovarian and endometrial cancers

description: Supplemental Table 1. Genes used for immune cell abundance calculation with MCP. Supplemental Table 2. Genes included for TGF-b gene signature and 18-gene IFN-γ immune signature. Supplemental Table 3. Cut-off values selected for Kaplan-Meier curve. * For IFN-γ and TGF-β signature score, quantile normalization was first applied and followed by log10 transformation, and signature scores were calculated by averaging of the included genes for the IFN-γ (18-gene) and TGF-β (6-gene) signatures. Both scores for each single sample were then scaled and 0-centered. ABSTRACT Aims: We investigated immunogenomic signatures with survival in ovarian and endometrial cancers (OC/EC). Patients & Methods/Materials: We used whole transcriptome sequencing data from uterine serous cancer and TCGA data of OC and EC (n=719). Gene expression score was calculated. Population abundance of immune cells were estimated. Results: TGF-β, myeloid cells, IFN-γ, T-cells, B-cells and endothelial cells predicted OS. Whereas CD47, neutrophils and endothelial cells predicted PFS. In multivariate analyses, TGF-β, CD47 and monocytic cells predicted survival in MSI-H EC whereas high IFN-γ trended toward improved survival in the MSS-EC. High IFN-γ/low TGF-β and high IFN-γ/low CD47 signatures predicted longer OS. Low TGF-β/low CD47 signature predicted longer OS only in the MSI-H EC. Conclusion: Our data support the role of immune markers in predicting survival in OC/EC.
DOI: 10.25402/imt.16411299.v1
title: IMT-2021-0052 Supplementary Data - Supplementary Material: Immune cells and signatures characterize tumor microenvironment and predict outcome in ovarian and endometrial cancers

description: Supplemental Table 1. Genes used for immune cell abundance calculation with MCP. Supplemental Table 2. Genes included for TGF-b gene signature and 18-gene IFN-γ immune signature. Supplemental Table 3. Cut-off values selected for Kaplan-Meier curve. * For IFN-γ and TGF-β signature score, quantile normalization was first applied and followed by log10 transformation, and signature scores were calculated by averaging of the included genes for the IFN-γ (18-gene) and TGF-β (6-gene) signatures. Both scores for each single sample were then scaled and 0-centered. ABSTRACT Aims: We investigated immunogenomic signatures with survival in ovarian and endometrial cancers (OC/EC). Patients & Methods/Materials: We used whole transcriptome sequencing data from uterine serous cancer and TCGA data of OC and EC (n=719). Gene expression score was calculated. Population abundance of immune cells were estimated. Results: TGF-β, myeloid cells, IFN-γ, T-cells, B-cells and endothelial cells predicted OS. Whereas CD47, neutrophils and endothelial cells predicted PFS. In multivariate analyses, TGF-β, CD47 and monocytic cells predicted survival in MSI-H EC whereas high IFN-γ trended toward improved survival in the MSS-EC. High IFN-γ/low TGF-β and high IFN-γ/low CD47 signatures predicted longer OS. Low TGF-β/low CD47 signature predicted longer OS only in the MSI-H EC. Conclusion: Our data support the role of immune markers in predicting survival in OC/EC.
DOI: 10.6084/m9.figshare.16411296
title: data.rar

description: It includes the COVID-19 data of Hebei Province and a map of the administrative divisions of Hebei Province.
DOI: 10.6084/m9.figshare.16411296.v1
title: data.rar

description: It includes the COVID-19 data of Hebei Province and a map of the administrative divisions of Hebei Province.
DOI: 10.6084/m9.figshare.16411302
title: Digital schematic maps and samples

description: samples and digital schematic maps
DOI: 10.5517/ccdc.csd.cc26yp62
title: CCDC 2054314: Experimental Crystal Structure Determination

description: Related Article: Yujie Ma, Xue Han, Shaojun Xu, Zi Wang, Weiyao Li, Ivan da Silva, Sarayute Chansai, Daniel Lee, Yichao Zou, Marek Nikiel, Pascal Manuel, Alena M. Sheveleva, Floriana Tuna, Eric J. L. McInnes, Yongqiang Cheng, Svemir Rudić, Anibal J. Ramirez-Cuesta, Sarah J. Haigh, Christopher Hardacre, Martin Schröder, Sihai Yang|2021|J.Am.Chem.Soc.|143|10977|doi:10.1021/jacs.1c03036
DOI: 10.6084/m9.figshare.16408392
title: Classification of COVID-19, Normal and Pneumonia Based on Enhancement X-Ray Image and Squeeze Net Model

description: In this study, a primary dataset containing 21,909 X-ray images as shown in table 1[11-13], that is basic dataset consists of three classes (COVID-19, Normal and Pneumonia) each class has different numbers of images. The dataset used is available on the best and famous websites such as (GitHub, Eurorad, Figshare and Kaggle).
DOI: 10.17632/g55n9xmnt2.1
title: eQE 2.0: Subsystem DFT beyond GGA functionals

description: By adopting a divide-and-conquer strategy, subsystem-DFT (sDFT) can dramatically reduce the computational cost of large-scale electronic structure calculations. The key ingredients of sDFT are the nonadditive kinetic energy and exchange-correlation functionals which dominate it's accuracy. Even though, available semilocal nonadditive functionals find a broad range of applications, their accuracy is somewhat limited especially for those systems where achieving balance between exchange-correlation interactions on one side and nonadditive kinetic energy on the other is crucial. In eQE 2.0, we improve dramatically the accuracy of sDFT simulations by (1) implementing nonlocal nonadditive kinetic energy functionals based on the LMGP family of functionals; (2) adapting Quantum ESPRESSO's implementation of rVV10 and vdW-DF nonlocal exchange-correlation functionals to be employed in sDFT simulations; (3) implementing “deorbitalized” meta GGA functionals (e.g., SCAN-L). We carefully assess the performance of the newly implemented tools on the S22-5 test set. eQE 2.0 delivers excellent interaction energies compared to conventional Kohn-Sham DFT and CCSD(T). The improved performance does not come at a loss of computational efficiency. We show that eQE 2.0 with nonlocal nonadditive functionals retains the same linear scaling behavior achieved previously in eQE 1.0 with semilocal nonadditive functionals.
DOI: 10.17632/sptvjxzdc9.1
title: Estadística sobre Actividades en I+D en el Sector Empresas

description: Medición de los recursos humanos y financieros destinados a actividades en I+D en el sector empresasVariables de estudio: Empresas que realizan I+D, personal empleado en I+D, gastos en I+D por disciplina científica y por rama de actividadLa url de acceso se dirige al menú de la operación desde donde se pueden visualizar como html y descargar las diferentes tablas que componen la publicación. La descarga se puede realizar en formato pc-axis, excel y CSV