cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/wn16-7z48
title: Coronavirus (COVID-19) Geo-tagged Tweets Dataset

description: This dataset contains the IDs of geo-tagged tweets. The tweets were captured by an on-going project deployed at https://live.rlamsal.com.np. The geolocation data was extracted from the tweets which mentioned anything about "corona", "covid-19", "coronavirus" or the variants of "sars-cov-2". Complying with Twitter's data sharing policy, only the tweet IDs are shared. You can re-construct the dataset by hydrating these IDs. The tweet IDs in this dataset belong to the tweets tweeted with an exact location that contained any of the previously mentioned keywords.Note: I started sharing the IDs of the tweets that contained the exact location information, only since April 28, 2020, with some genuine requests coming in from academic researchers who did not want to hydrate the whole lists of IDs (above 100+ million tweets) shared in the Coronavirus (COVID-19) Tweets Dataset.If you need the geolocation-based data starting March 20, 2020, then use the Coronavirus (COVID-19) Tweets Dataset and hydrate the IDs while adding the following condition:data = json.loads(data) if data["coordinates"]: longitude, latitude = data["coordinates"]["coordinates"]The data is available in two formats: CSV and JSON. I'll be sharing new files every day, and the files will be named period-wise. For example, april28-april29.* will contain tweet ID and sentiment data of the tweets that were tweeted between April 28, 2020, and April 29, 2020.
DOI: 10.15129/d3d48a4a-c040-4e18-b19f-95c1108eb8b3
title: Data for: "Oligofluorene truxene laser sensor: towards bacteria growth detection"

description: Data for figures 4 and 5 and beam diameter/fluence calculations
DOI: 10.15468/vm4k3b
title: Deep-sea spider crabs of the families Epialtidae MacLeay, 1838 and Inachidae MacLeay, 1838, from the South China Sea, with descriptions of two new species (Decapoda, Brachyura, Majoidea)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lee, Bee Yan, Forges, Bertrand Richer De, Ng, Peter K. L. (2017): Deep-sea spider crabs of the families Epialtidae MacLeay, 1838 and Inachidae MacLeay, 1838, from the South China Sea, with descriptions of two new species (Decapoda, Brachyura, Majoidea). European Journal of Taxonomy 358: 1-37, DOI: https://doi.org/10.5852/ejt.2017.358
DOI: 10.17632/hdw2zhmw4f.1
title: COVID-19 Cases

description: The high sensitivity of COVID-19 and the need for high accuracy calculations causes the necessity to collect required data sets from reliable sources. Thus all information was collected and categorized from reputable sources such as WHO (World Health Organization) and worldometers site (www.worldometers.info). The worldometers site contains information such as daily mortality statistics, recovery, and newly confirmed cases. Research data including observation data is obtained from a collection of Iranian samples reports in three parts (i.e. death, confirmed and recovered). This countrywide daily information is confirmed by the World Health Organization(WHO). It should be noted that the relevant data was collected between February 19 and May16 2020.
DOI: 10.15468/8wudfe
title: Two new species of Colletteidae (Crustacea: Tanaidacea: Tanaidomorpha) from Bransfield Strait, Antarctica

description: This dataset contains the digitized treatments in Plazi based on the original journal article Segadilha, Juliana L., Dos Santos, Kátia C., Serejo, Cristiana S. (2017): Two new species of Colletteidae (Crustacea: Tanaidacea: Tanaidomorpha) from Bransfield Strait, Antarctica. European Journal of Taxonomy 364: 1-16, DOI: https://doi.org/10.5852/ejt.2017.364
DOI: 10.17632/rp3hnvh494.1
title: Selecting for altered substrate specificity reveals the evolutionary flexibility of ATP-binding cassette transporters, Srikant S et al

description: This is the accompanying data for the Current Biology article titled "Selecting for altered substrate specificity reveals the evolutionary flexibility of ATP-binding cassette transporters" authored by Sriram Srikant, Rachelle Gaudet and Andrew W Murray (https://doi.org/10.1016/j.cub.2020.02.077). The sequence alignment and homology models presented here support the inferences made in our manuscript. The autocrine data presented here is the raw data supporting our figures. Data index: MendeleySourceDataFile1.fasta | Alignment of fungal pheromone ABC exporters focused on Y. lipolytica Ste6. MendeleySourceDataFile2.pdb | Homology model of YlSte6 made based on inward-open LTC4-bound BtMRP1 (PDB:5UJA). MendeleySourceDataFile3.pdb | Homology model of YlSte6 made based on outward-open ATP-bound BtMRP1 (PDB:6BHU). MendeleySourceDataFile4.xlsx | Autocrine data of ScSte6, YlSte6, selected clones and mutational combinations of YlSte6 used to test additive model (Figure 6). MendeleySourceDataFile5.csv | Autocrine data of all selected clones tested by flow cytometry (Figure S2 and S3).
DOI: 10.17632/s3ncfct2z8.1
title: Challenges and countermeasures in the prevention of nosocomial infections of SARS-CoV-2 before resumption of work: implications for the dermatology department--supplementary file

description: Supplemental Material 1: Training and Evaluation form for the Department of Dermatology; Supplemental Material 2: Online Examination for the Department of Dermatology;
DOI: 10.15468/rvby4j
title: On Kincaidiana Altman, 1936 and Guestphalinus Michaelsen, 1933 (Annelida, Clitellata, Lumbriculidae), with the descriptions of three new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Fend, Steven V., Rodriguez, Pilar, Achurra, Ainara, Erséus, Christer (2017): On Kincaidiana Altman, 1936 and Guestphalinus Michaelsen, 1933 (Annelida, Clitellata, Lumbriculidae), with the descriptions of three new species. European Journal of Taxonomy 361: 1-46, DOI: https://doi.org/10.5852/ejt.2017.361
DOI: 10.15468/4s6zxa
title: First record of the genus Spinaethorax Papáč & Palacios-Vargas, 2016 (Collembola, Neelipleona, Neelidae) in Asia, with a new species from a Vietnamese cave

description: This dataset contains the digitized treatments in Plazi based on the original journal article Schneider, Clément, Deharveng, Louis (2017): First record of the genus Spinaethorax Papáč & Palacios-Vargas, 2016 (Collembola, Neelipleona, Neelidae) in Asia, with a new species from a Vietnamese cave. European Journal of Taxonomy 363: 1-20, DOI: https://doi.org/10.5852/ejt.2017.363
DOI: 10.15468/ndkj8s
title: The genus Dasydorylas Skevington in Iran, with the description of two new species (Diptera: Pipunculidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Motamedinia, Behnam, Kehlmaier, Christian, Mokhtari, Azizollah, Rakhshani, Ehsan, Gilasian, Ebrahim (2017): The genus Dasydorylas Skevington in Iran, with the description of two new species (Diptera: Pipunculidae). European Journal of Taxonomy 362: 1-13, DOI: https://doi.org/10.5852/ejt.2017.362
DOI: 10.5281/zenodo.3835811
title: Perceptual comparison between the auralized and the real room for a classroom scenario - listening test results

description: The raw data of the listening test.
DOI: 10.5281/zenodo.3345287
title: Dataset biopt study

description: Raw database with data on which our article entitled 'An observational study on intracutaneous sodium storage in intensive care patients and controles' was based.
DOI: 10.5281/zenodo.3345288
title: Dataset biopt study

description: Raw database with data on which our article entitled 'An observational study on intracutaneous sodium storage in intensive care patients and controles' was based.
DOI: 10.7910/dvn/d0cof1/osxkpp
title: Analyses.do

description: :unav
DOI: 10.7910/dvn/d0cof1/ygyvw5
title: learn social media_cleaned.tab

description: :unav
DOI: 10.17632/pryjs39z37.1
title: In-stream wood characteristics and budget model simulation results

description: This dataset contains files with in-stream wood information for Carnation Creek, B.C. These files include wood piece and logjam information, piece orientation, input files for a wood budget model, and simulation results from this model. Detailed descriptions of how the data were collected are found in Reid, D. A., Hassan, M. A., Bird, S., and Hogan, D. ( 2019) Spatial and temporal patterns of sediment storage over 45 years in Carnation Creek, BC, a previously glaciated mountain catchment. Earth Surf. Process. Landforms, 44: 1584– 1601. https://doi.org/10.1002/esp.4595. Descriptions of individual files: "TIPSYCWD.csv": file containing timeseries data of riparian coarse wood debris, simulated from the TIPSY program. This file is uses as input to the wood budget model "TIPSYregen.csv" file containing timeseries of riparian vegetation regrowth, simulated from the TIPSY program. This file is uses as input to the wood budget model "Erosionrate.csv": File containing bank erosion rate information (m/yr) used for estimating riparian wood input for the budget model "Orientations.csv" : File containing information on the orientation of wood pieces relative to channel thalweg. "SA piece and volume.csv": File containing information on the proportion of wood pieces in different size classes, and the volume per year in different study sections of Carnation Creek. "SAwood_model.csv": File containing field values used for comparison with model result data. "Wood piece size distribution.csv": File containing information on the distribution of wood piece sizes in each piece size class Folder: "Model output" - contains wood budget model output in the form of .rds files (open with R programming language). These files contain timeseries data of model simulations Folder "Longitudinal survey data (jams)" - this folder contains four .csv files, each with information on logjam volume relative to distance along Carnation Creek.
DOI: 10.5281/zenodo.3835990
title: Supporting data for "Spatial Noise Correlations in a Si/SiGe Two-Qubit Device from Bell State Coherences"

description: Datasets, analysis scripts and simulations for "Spatial Noise Correlations in a Si/SiGe Two-Qubit Device from Bell State Coherences". For more information and instructions, see READ ME.txt. For questions, contact Jelmer Boter (j.m.boter@tudelft.nl) or Lieven Vandersypen (l.m.k.vandersypen@tudelft.nl).
DOI: 10.17632/hhjb594rhj.1
title: Data for Quantum Chemical Topology and Natural Bond Orbital Analysis of M-O Covalency in M(OC6H5)4 (M = Ti, Zr, Hf, Ce, Th, Pa, U, Np)

description: Optimized geometries for Pa and Np systems and IQA data for all systems studied.
DOI: 10.17894/ucph.2129b5a8-a6c7-45b9-aa1d-8065249be1de
title: Biodeterioration of bone - the effect of four marine and terrestrial depositional environments on bacterial community of pig bone fragments
DOI: 10.5281/zenodo.3835306
title: i2QTL HipSci Structural Variant and Short Tandem Repeat Genotypes

description: Here we provide structural variant and short tandem repeat variant calls from 204 HipSci donors as described in the manuscript Jakubosky et al. "Discovery and quality analysis of a comprehensive set of structural variants and short tandem repeats". https://www.biorxiv.org/content/10.1101/713198v2 Jakubosky D, Smith EN, D’Antonio M, Bonder MJ, Young Greenwald WW, Matsui H, D’Antonio-Chronowska A, (Hipsci), Stegle O, Montgomery SB, DeBoever C, Frazer KA. Discovery and Quality Analysis of a Comprehensive Set of Structural Variants and Short Tandem Repeats. bioRxiv. January 2019:713198. doi:10.1101/713198.
DOI: 10.5281/zenodo.3835307
title: i2QTL HipSci Structural Variant and Short Tandem Repeat Genotypes

description: Here we provide structural variant and short tandem repeat variant calls from 204 HipSci donors as described in the manuscript Jakubosky et al. "Discovery and quality analysis of a comprehensive set of structural variants and short tandem repeats". https://www.biorxiv.org/content/10.1101/713198v2 Jakubosky D, Smith EN, D’Antonio M, Bonder MJ, Young Greenwald WW, Matsui H, D’Antonio-Chronowska A, (Hipsci), Stegle O, Montgomery SB, DeBoever C, Frazer KA. Discovery and Quality Analysis of a Comprehensive Set of Structural Variants and Short Tandem Repeats. bioRxiv. January 2019:713198. doi:10.1101/713198.
DOI: 10.3886/e100281
title: Resting state fMRI and clinical data from adolescents with remitted depression: A pilot study of rumination-focused cognitive behavior therapy

description: This pilot randomized control trial was designed to examine whether Rumination-Focused Cognitive Behavior Therapy (RFCBT) reduces rumination and residual depressive symptoms among adolescents with a history of Major Depressive Disorder (MDD) who are at risk for relapse. We also examined whether these changes in symptoms were associated with changes in functional connectivity of the posterior cingulate cortex (PCC), a key node in the default mode network (DMN). Thirty-three adolescents (ages 12-18) were randomized to eight weeks of RFCBT or an assessment only (AO) control. Twenty two adolescents successfully completed fMRI scans pre- and post-intervention. Adolescents were recruited from the clinic and community and met criteria for at least one previous episode of MDD and were currently in full or partial remission. An Independent Evaluator interviewed parent and child before and after the eight-week intervention. The left PCC (-5, -50, 36) seed was used to probe resting state functional connectivity of the DMN. Adolescents who received RFCBT demonstrated reduced rumination (F = -2.76, df = 112, p &lt; .01, 95% CI [-4.72,-0.80]) and self-report depression across eight weeks (F = -2.58, df = 113, p &lt; .01, 95% CI [-4.21, -0.94]). Youth who received RFCBT also demonstrated significant decreases in connectivity between the left PCC and the right inferior frontal gyrus (IFG) and bilateral inferior temporal gyri (ITG). Degree of change in connectivity was correlated with changes in self-report depression and rumination. These data suggest that rumination can be reduced over eight weeks and that this reduction is associated with parallel decreases in residual depressive symptoms and decreased functional connectivity of the left PCC with cognitive control nodes. These changes may enhance the ability of vulnerable youth to stay well during the transition to adulthood.<br>*From abstract of published article in PLOS ONE
DOI: 10.3886/e100281v3
title: Resting state fMRI and clinical data from adolescents with remitted depression: A pilot study of rumination-focused cognitive behavior therapy

description: This pilot randomized control trial was designed to examine whether Rumination-Focused Cognitive Behavior Therapy (RFCBT) reduces rumination and residual depressive symptoms among adolescents with a history of Major Depressive Disorder (MDD) who are at risk for relapse. We also examined whether these changes in symptoms were associated with changes in functional connectivity of the posterior cingulate cortex (PCC), a key node in the default mode network (DMN). Thirty-three adolescents (ages 12-18) were randomized to eight weeks of RFCBT or an assessment only (AO) control. Twenty two adolescents successfully completed fMRI scans pre- and post-intervention. Adolescents were recruited from the clinic and community and met criteria for at least one previous episode of MDD and were currently in full or partial remission. An Independent Evaluator interviewed parent and child before and after the eight-week intervention. The left PCC (-5, -50, 36) seed was used to probe resting state functional connectivity of the DMN. Adolescents who received RFCBT demonstrated reduced rumination (F = -2.76, df = 112, p &lt; .01, 95% CI [-4.72,-0.80]) and self-report depression across eight weeks (F = -2.58, df = 113, p &lt; .01, 95% CI [-4.21, -0.94]). Youth who received RFCBT also demonstrated significant decreases in connectivity between the left PCC and the right inferior frontal gyrus (IFG) and bilateral inferior temporal gyri (ITG). Degree of change in connectivity was correlated with changes in self-report depression and rumination. These data suggest that rumination can be reduced over eight weeks and that this reduction is associated with parallel decreases in residual depressive symptoms and decreased functional connectivity of the left PCC with cognitive control nodes. These changes may enhance the ability of vulnerable youth to stay well during the transition to adulthood.<br>*From abstract of published article in PLOS ONE
DOI: 10.3886/e119550v2
title: Supplementary Data for "Household Search and the Marital Wage Premium"

description: Data extract from PSID used to create Appendix Figure H2
DOI: 10.5281/zenodo.3835795
title: GAW URLs and time stamps 2019-06

description: The dataset comprises the URLs and corresponding time stamps of the GAW snapshot harvested in 2019-06. The compressed directory <em>2019-06.zip</em> contains 100 files. Each file contains two columns delimited by a tab. The time stamps are given in the format of the java equivalent yyyyMMddHHmmss and are parsed as: <pre>DateTime.parse(timeStamp, DateTimeFormat.forPattern("yyyyMMddHHmmss")).getMillis</pre>
DOI: 10.5281/zenodo.3835796
title: GAW URLs and time stamps 2019-06

description: The dataset comprises the URLs and corresponding time stamps of the GAW snapshot harvested in 2019-06. The compressed directory <em>2019-06.zip</em> contains 100 files. Each file contains two columns delimited by a tab. The time stamps are given in the format of the java equivalent yyyyMMddHHmmss and are parsed as: <pre>DateTime.parse(timeStamp, DateTimeFormat.forPattern("yyyyMMddHHmmss")).getMillis</pre>
DOI: 10.17638/datacat.liverpool.ac.uk/1090
title: Southwell deer SBV data
DOI: 10.3886/e100281v3-24491
title: Resting state fMRI and clinical data from adolescents with remitted depression: A pilot study of rumination-focused cognitive behavior therapy

description: This pilot randomized control trial was designed to examine whether Rumination-Focused Cognitive Behavior Therapy (RFCBT) reduces rumination and residual depressive symptoms among adolescents with a history of Major Depressive Disorder (MDD) who are at risk for relapse. We also examined whether these changes in symptoms were associated with changes in functional connectivity of the posterior cingulate cortex (PCC), a key node in the default mode network (DMN). Thirty-three adolescents (ages 12-18) were randomized to eight weeks of RFCBT or an assessment only (AO) control. Twenty two adolescents successfully completed fMRI scans pre- and post-intervention. Adolescents were recruited from the clinic and community and met criteria for at least one previous episode of MDD and were currently in full or partial remission. An Independent Evaluator interviewed parent and child before and after the eight-week intervention. The left PCC (-5, -50, 36) seed was used to probe resting state functional connectivity of the DMN. Adolescents who received RFCBT demonstrated reduced rumination (F = -2.76, df = 112, p &lt; .01, 95% CI [-4.72,-0.80]) and self-report depression across eight weeks (F = -2.58, df = 113, p &lt; .01, 95% CI [-4.21, -0.94]). Youth who received RFCBT also demonstrated significant decreases in connectivity between the left PCC and the right inferior frontal gyrus (IFG) and bilateral inferior temporal gyri (ITG). Degree of change in connectivity was correlated with changes in self-report depression and rumination. These data suggest that rumination can be reduced over eight weeks and that this reduction is associated with parallel decreases in residual depressive symptoms and decreased functional connectivity of the left PCC with cognitive control nodes. These changes may enhance the ability of vulnerable youth to stay well during the transition to adulthood.<br>*From abstract of published article in PLOS ONE
DOI: 10.5281/zenodo.3836543
title: Response of psychrophilic plant endosymbionts to experimental temperature increase

description: Countless uncertainties remain regarding the effects of global warming on biodiversity, including the ability of organisms to adapt and how that will affect obligate symbiotic relationships. The present study aimed to determine the consequences of temperature increase on the adaptation of plant endosymbionts (endophytes) that grow better at low temperatures (psychrophilic). We isolated fungal endophytes from a high-elevation (paramo) endemic plant. Initial growth curves were constructed at different temperatures (4–25°C). Then, experiments were carried in which only the psychrophilic isolates were subjected to repeated increments in temperature. After the experiments, the final growth curves showed significantly slower growth than the initial curves, and some isolates even ceased to grow. While most studies suggest that the distribution of microorganisms will expand as temperatures increase because most of these organisms grow better at 25°C, the results from our experiments demonstrate that psychrophilic fungi were negatively affected by temperature increases. These outcomes raise questions concerning the potential adaptation of beneficial endosymbiotic fungi in the already threatened plant ecosystems. Assessing the consequences of global warming at all trophic levels is urgent because many species on Earth depend on their microbial symbionts for survival. Associations are mutually beneficial, results from our study have implications on the potential survival of these plants and high-elevation ecosystems.
DOI: 10.5281/zenodo.3836544
title: Response of psychrophilic plant endosymbionts to experimental temperature increase

description: Countless uncertainties remain regarding the effects of global warming on biodiversity, including the ability of organisms to adapt and how that will affect obligate symbiotic relationships. The present study aimed to determine the consequences of temperature increase on the adaptation of plant endosymbionts (endophytes) that grow better at low temperatures (psychrophilic). We isolated fungal endophytes from a high-elevation (paramo) endemic plant. Initial growth curves were constructed at different temperatures (4–25°C). Then, experiments were carried in which only the psychrophilic isolates were subjected to repeated increments in temperature. After the experiments, the final growth curves showed significantly slower growth than the initial curves, and some isolates even ceased to grow. While most studies suggest that the distribution of microorganisms will expand as temperatures increase because most of these organisms grow better at 25°C, the results from our experiments demonstrate that psychrophilic fungi were negatively affected by temperature increases. These outcomes raise questions concerning the potential adaptation of beneficial endosymbiotic fungi in the already threatened plant ecosystems. Assessing the consequences of global warming at all trophic levels is urgent because many species on Earth depend on their microbial symbionts for survival. Associations are mutually beneficial, results from our study have implications on the potential survival of these plants and high-elevation ecosystems.
DOI: 10.5281/zenodo.3835646
title: Simulated salinity for the saltwater intrusion study in the Po Delta (Italy)

description: This database includes the results of the SHYFEM<br> application to the Po Delta (Italy) presented in the work entitled<br> "Saltwater intrusion in a Mediterranean delta under a changing climate".<br> Model results are presented in terms of the 3D maximum salinity for the<br> present day condition (summer 2017) and the RCP8.5 scenario.<br>
DOI: 10.5281/zenodo.3835647
title: Simulated salinity for the saltwater intrusion study in the Po Delta (Italy)

description: This database includes the results of the SHYFEM<br> application to the Po Delta (Italy) presented in the work entitled<br> "Saltwater intrusion in a Mediterranean delta under a changing climate".<br> Model results are presented in terms of the 3D maximum salinity for the<br> present day condition (summer 2017) and the RCP8.5 scenario.<br>