cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8113376
title: Additional file 12: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S6. Gene ontology (GO) enrichment analysis for DEGFPU in nine tissues. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.8113433
title: Additional file 20: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S12. List of WGCNA module genes. (XLSX 465 kb)
DOI: 10.6084/m9.figshare.6540683
title: Additional file 9: of Genome-wide analysis of long non-coding RNAs affecting roots development at an early stage in the rice response to cadmium stress

description: Table S5. The differentially expressed mRNAs by lncRNA-seq. (XLS 831 kb)
DOI: 10.6084/m9.figshare.8113403
title: Additional file 16: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S8. Gene IDs of common up-regulated genes between F1 vs T449 and H1 vs T449 in anther at meiosis stage. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.8113421
title: Additional file 19: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S11. Up-regulated DEGs-sp in F1 compared to T449 were found to be overlapped with the down-regulated genes in T449 compared to E249 (diploid). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.8113448
title: Additional file 24: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S16. Gene IDs of DEGFPU combined with variations between parents lines in nine tissues. (XLSX 153 kb)
DOI: 10.6084/m9.figshare.8113403.v1
title: Additional file 16: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S8. Gene IDs of common up-regulated genes between F1 vs T449 and H1 vs T449 in anther at meiosis stage. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.8637647
title: Additional file 1: of A post-GWAS confirming effects of PRKG1 gene on milk fatty acids in a Chinese Holstein dairy population

description: Table S1. PCR primer information of PRKG1 gene. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.6540533.v1
title: Additional file 2: of Genome-wide analysis of long non-coding RNAs affecting roots development at an early stage in the rice response to cadmium stress

description: Table S2. The interaction information of rice root differential genes and co-expressed lncRNAs in cis. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.6540578
title: Additional file 4: of Genome-wide analysis of long non-coding RNAs affecting roots development at an early stage in the rice response to cadmium stress

description: Table S3. The interaction information of rice root differential genes and co-expressed lncRNAs in trans. (XLSX 870 kb)
DOI: 10.6084/m9.figshare.8113376.v1
title: Additional file 12: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S6. Gene ontology (GO) enrichment analysis for DEGFPU in nine tissues. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.8113382.v1
title: Additional file 13: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S7. Gene ontology (GO) enrichment analysis for NAGs in nine tissues. (XLSX 49 kb)
DOI: 10.6084/m9.figshare.8113433.v1
title: Additional file 20: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S12. List of WGCNA module genes. (XLSX 465 kb)
DOI: 10.6084/m9.figshare.8113439.v1
title: Additional file 21: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S13. Gene ontology (GO) enrichment analysis of WGCNA module genes. (XLSX 76 kb)
DOI: 10.6084/m9.figshare.18585843.v1
title: Additional file 1 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 1: Table S1. Clinicopathologic features of CRC patients.
DOI: 10.6084/m9.figshare.8113415
title: Additional file 18: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S10. Meiosis related and stage-specific genes detected in anther during meiosis. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.8113448.v1
title: Additional file 24: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S16. Gene IDs of DEGFPU combined with variations between parents lines in nine tissues. (XLSX 153 kb)
DOI: 10.6084/m9.figshare.6540533
title: Additional file 2: of Genome-wide analysis of long non-coding RNAs affecting roots development at an early stage in the rice response to cadmium stress

description: Table S2. The interaction information of rice root differential genes and co-expressed lncRNAs in cis. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.12307811.v1
title: Additional file 1 of Grading of Glioma: combined diagnostic value of amide proton transfer weighted, arterial spin labeling and diffusion weighted magnetic resonance imaging

description: Additional file 1: Supplementary Table 1. Inter-observer agreement. Supplementary Table 2. Correlation between Ki-67 and the parameters. Supplementary Table 3. Comparison of the area under the receiver-operating characteristic curve of the combinations of MRI parameters. Supplementary Figure. Correlation between Ki-67 and the MRI parameters.
DOI: 10.6084/m9.figshare.18585846
title: Additional file 2 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 2: Table S2. List of primers.
DOI: 10.6084/m9.figshare.8113415.v1
title: Additional file 18: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S10. Meiosis related and stage-specific genes detected in anther during meiosis. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.12307832.v1
title: Additional file 1 of MicroRNA-214 modulates the senescence of vascular smooth muscle cells in carotid artery stenosis

description: Additional file 1: Supplemental materials and methods. Figure S1. MicroRNA-214-3p (miR-214) modulates the snenecence of human aortic smooth muscle cells induced by hypoxia. (A) The cellular and exosomal miR-214 in CoC2 treated HASMCs after 48 h (n = 5). (B,D) Representative western blots depicting quaking, TERF1, TERF2, p16INK4, and pRB expression in miR-214 mimic and miR-214 antagomiR transfected HASMCs (n = 3). (C,E) Normalized expressions of quaking, TERF1, TERF2, p16INK4, and pRB (n = 3). (F,H) Senescence-associated β-galactosidase staining demonstrating senescence in miR-214 mimic and miR-214 antagomiR transfected HASMCs. (G,I) Bar graphs show quantification of relative of SA-β-gal positive cells (n = 3). (J,L) Immunofluorescent staining showing the number of Ki-67 positive cells (pink; shown by white arrow) in miR-214 mimic and miR-214 antagomiR transfected HASMCs. (K,M) Bar graphs show quantification of relative of Ki-67 positive cells (n = 3). Bar, 100 μm. Data are presented as the means ± SEM. * P &lt; 0.05; ** P &lt; 0.01 (Two-tailed Student’s t-test).
DOI: 10.6084/m9.figshare.18585861
title: Additional file 7 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 7: Table S5. The top proteins specific to SLCO4A1-AS1 identified in sense RNA group bands at approximately 100 kD and 35 kD by Mass Spectrometry analysis.
DOI: 10.6084/m9.figshare.6540554
title: Additional file 3: of Genome-wide analysis of long non-coding RNAs affecting roots development at an early stage in the rice response to cadmium stress

description: Table S6. Pathways and proportions after KEGG (Kyoto Encyclopedia of Genes and Genomes) analysis of differentially expressed target genes in cis in the root. KEGG pathways significantly enriched in our experiments were displayed. (XLS 14 kb)
DOI: 10.6084/m9.figshare.8113451.v1
title: Additional file 25: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S17. Gene ontology (GO) enrichment analysis for DEGFPU combined with gene variations between parental lines in the nine tissues. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.8113490
title: Additional file 5: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S3. Frequency of cells exhibiting abnormal chromosome behavior in pollen mother cells (PMC) during meiosis. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.8637656.v1
title: Additional file 3: of A post-GWAS confirming effects of PRKG1 gene on milk fatty acids in a Chinese Holstein dairy population

description: Table S3. 48 breeds for 1575 individuals in the database of 1000 Bull Genomes Project. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.18585861.v1
title: Additional file 7 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 7: Table S5. The top proteins specific to SLCO4A1-AS1 identified in sense RNA group bands at approximately 100 kD and 35 kD by Mass Spectrometry analysis.
DOI: 10.6084/m9.figshare.8113439
title: Additional file 21: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S13. Gene ontology (GO) enrichment analysis of WGCNA module genes. (XLSX 76 kb)
DOI: 10.6084/m9.figshare.8113490.v1
title: Additional file 5: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S3. Frequency of cells exhibiting abnormal chromosome behavior in pollen mother cells (PMC) during meiosis. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.8637653
title: Additional file 2: of A post-GWAS confirming effects of PRKG1 gene on milk fatty acids in a Chinese Holstein dairy population

description: Table S2. Information of significant SNPs used for estimating the Linkage disequilibrium (LD) between PRKG1 and SCD. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.8637653.v1
title: Additional file 2: of A post-GWAS confirming effects of PRKG1 gene on milk fatty acids in a Chinese Holstein dairy population

description: Table S2. Information of significant SNPs used for estimating the Linkage disequilibrium (LD) between PRKG1 and SCD. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.18585846.v1
title: Additional file 2 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 2: Table S2. List of primers.
DOI: 10.6084/m9.figshare.8113451
title: Additional file 25: of Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes

description: Table S17. Gene ontology (GO) enrichment analysis for DEGFPU combined with gene variations between parental lines in the nine tissues. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.18585849.v1
title: Additional file 3 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 3: Table S3. Identificantion of fourteen lncRNAs candidates upregulation from 5 and 50 pairs CRC and adjacent tissues
DOI: 10.6084/m9.figshare.14391489
title: Additional file 1 of Efficacy and mechanism of the combination of PARP and CDK4/6 inhibitors in the treatment of triple-negative breast cancer

description: Additional file 1: Table S1. Primers used in RT-PCR. Table S2. Antibodies used in this study. Table S3. sgRNA sequence of genes. Table S4. Inhibition rate and combination index of HCC1937 and MDA-MB-436 with single-agent or combined treatment.
DOI: 10.6084/m9.figshare.18585843
title: Additional file 1 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 1: Table S1. Clinicopathologic features of CRC patients.
DOI: 10.6084/m9.figshare.19634698
title: Additional file 1 of Salt-tolerant and thermostable mechanisms of an endoglucanase from marine Aspergillus niger

description: Additional file 1: AnEGL.
DOI: 10.6084/m9.figshare.18585849
title: Additional file 3 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 3: Table S3. Identificantion of fourteen lncRNAs candidates upregulation from 5 and 50 pairs CRC and adjacent tissues
DOI: 10.6084/m9.figshare.12307907
title: Additional file 2 of Development of nuclear SSR and chloroplast genome markers in diverse Liriodendron chinense germplasm based on low-coverage whole genome sequencing

description: Additional file 2: Table S2. Primers of Indels markers in the L. chinense chloroplast genome.
DOI: 10.6084/m9.figshare.14391394
title: Additional file 1 of Periostin loss-of-function protects mice from post-traumatic and age-related osteoarthritis

description: Additional file 1. Gene transcripts
DOI: 10.6084/m9.figshare.12307922
title: Additional file 5 of Development of nuclear SSR and chloroplast genome markers in diverse Liriodendron chinense germplasm based on low-coverage whole genome sequencing

description: Additional file 5: Table S5. Nuclear SSRs identified in this study.
DOI: 10.6084/m9.figshare.14391394.v1
title: Additional file 1 of Periostin loss-of-function protects mice from post-traumatic and age-related osteoarthritis

description: Additional file 1. Gene transcripts
DOI: 10.6084/m9.figshare.12307922.v1
title: Additional file 5 of Development of nuclear SSR and chloroplast genome markers in diverse Liriodendron chinense germplasm based on low-coverage whole genome sequencing

description: Additional file 5: Table S5. Nuclear SSRs identified in this study.
DOI: 10.34740/kaggle/dsv/7626450
title: Full TMDB Movies Dataset 2024 (985K Movies)
DOI: 10.6084/m9.figshare.6540647
title: Additional file 7: of Genome-wide analysis of long non-coding RNAs affecting roots development at an early stage in the rice response to cadmium stress

description: Table S4. The qPCR used transcripts and their primers. We made a random selection of 10 genes in the genesâ data of lncRNA-seq. According to the random criteria, so we have selected both the significantly different expressing part and the nonsignificantly part to enhance the reliability of the results by lncRNA-seq. (XLS 15 kb)
DOI: 10.6084/m9.figshare.6540647.v1
title: Additional file 7: of Genome-wide analysis of long non-coding RNAs affecting roots development at an early stage in the rice response to cadmium stress

description: Table S4. The qPCR used transcripts and their primers. We made a random selection of 10 genes in the genesâ data of lncRNA-seq. According to the random criteria, so we have selected both the significantly different expressing part and the nonsignificantly part to enhance the reliability of the results by lncRNA-seq. (XLS 15 kb)
DOI: 10.6084/m9.figshare.8113661.v1
title: Additional file 1 of miRspongeR: an R/Bioconductor package for the identification and analysis of miRNA sponge interaction networks and modules

description: The used running R scripts for reproducing the results of the case study. (R 4 kb)
DOI: 10.6084/m9.figshare.8113664
title: Additional file 2 of miRspongeR: an R/Bioconductor package for the identification and analysis of miRNA sponge interaction networks and modules

description: The predicted miRNA sponge interactions by the 8 built-in methods. (XLSX 49 kb)
DOI: 10.6084/m9.figshare.12832002
title: Additional file 4 of China’s practice to prevent and control COVID-19 in the context of large population movement

description: Additional file 4. The original data of daily mortality.
DOI: 10.6084/m9.figshare.12832005
title: Additional file 5 of China’s practice to prevent and control COVID-19 in the context of large population movement

description: Additional file 5. The original data of population shift levels.
DOI: 10.6084/m9.figshare.6540578.v1
title: Additional file 4: of Genome-wide analysis of long non-coding RNAs affecting roots development at an early stage in the rice response to cadmium stress

description: Table S3. The interaction information of rice root differential genes and co-expressed lncRNAs in trans. (XLSX 870 kb)
DOI: 10.6084/m9.figshare.12832008
title: Additional file 6 of China’s practice to prevent and control COVID-19 in the context of large population movement

description: Additional file 6. The original data of daily local new diagnosed and cured cases.
DOI: 10.6084/m9.figshare.12832008.v1
title: Additional file 6 of China’s practice to prevent and control COVID-19 in the context of large population movement

description: Additional file 6. The original data of daily local new diagnosed and cured cases.
DOI: 10.6084/m9.figshare.6540632.v1
title: Additional file 7: of UGbS-Flex, a novel bioinformatics pipeline for imputation-free SNP discovery in polyploids without a reference genome: finger millet as a case study

description: Table S4. Comparison of SNPs identified by UGbS-Flex and GBS-SNP-CROP. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.12832065
title: Additional file 11 of Gut microbiota modulation with long-chain corn bran arabinoxylan in adults with overweight and obesity is linked to an individualized temporal increase in fecal propionate

description: Additional file 11: Table S5. Supporting metadata. Table provides relevant 16S rRNA gene amplicons sequencing metadata
DOI: 10.6084/m9.figshare.12832002.v1
title: Additional file 4 of China’s practice to prevent and control COVID-19 in the context of large population movement

description: Additional file 4. The original data of daily mortality.
DOI: 10.6084/m9.figshare.12832005.v1
title: Additional file 5 of China’s practice to prevent and control COVID-19 in the context of large population movement

description: Additional file 5. The original data of population shift levels.
DOI: 10.6084/m9.figshare.18585855.v1
title: Additional file 5 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 5: Table S4. The related original data of Fig. 2d.
DOI: 10.6084/m9.figshare.12307904.v1
title: Additional file 1 of Development of nuclear SSR and chloroplast genome markers in diverse Liriodendron chinense germplasm based on low-coverage whole genome sequencing

description: Additional file 1: Table S1. Primers of SNP markers in the L. chinense chloroplast genome.
DOI: 10.6084/m9.figshare.12308009
title: Additional file 3 of Genome-wide variations analysis of sorghum cultivar Hongyingzi for brewing Moutai liquor

description: Additional file 3: Figure S5 and Figure S6.
DOI: 10.6084/m9.figshare.6540605.v1
title: Additional file 5: of Genome-wide analysis of long non-coding RNAs affecting roots development at an early stage in the rice response to cadmium stress

description: Table S7. Pathways and proportions after KEGG (Kyoto Encyclopedia of Genes and Genomes) analysis of differentially expressed target genes in trans in the root. KEGG pathways significantly enriched in our experiments were displayed. (XLS 14 kb)
DOI: 10.6084/m9.figshare.8113754
title: MOESM3 of Enhancement of cellulase production in Trichoderma reesei RUT-C30 by comparative genomic screening

description: Additional file 3. Primers used in this study.
DOI: 10.5281/zenodo.8187943
title: A Parsec-Scale Galactic 3D Dust Map out to 1.25 kpc from the Sun -- Dataset for the 1.25 kpc 3D Dust Map and the 2 kpc 3D Dust Map

description: Accompanying data products for Edenhofer et al. (2023).
DOI: 10.5281/zenodo.8212070
title: A Parsec-Scale Galactic 3D Dust Map out to 1.25 kpc from the Sun -- Dataset for the 1.25 kpc 3D Dust Map and the 2 kpc 3D Dust Map

description: Accompanying data products for Edenhofer et al. (2023).
DOI: 10.6084/m9.figshare.12307913
title: Additional file 4 of Development of nuclear SSR and chloroplast genome markers in diverse Liriodendron chinense germplasm based on low-coverage whole genome sequencing

description: Additional file 4: Table S4. Primers of small inversions.
DOI: 10.6084/m9.figshare.12832065.v1
title: Additional file 11 of Gut microbiota modulation with long-chain corn bran arabinoxylan in adults with overweight and obesity is linked to an individualized temporal increase in fecal propionate

description: Additional file 11: Table S5. Supporting metadata. Table provides relevant 16S rRNA gene amplicons sequencing metadata
DOI: 10.6084/m9.figshare.14391489.v1
title: Additional file 1 of Efficacy and mechanism of the combination of PARP and CDK4/6 inhibitors in the treatment of triple-negative breast cancer

description: Additional file 1: Table S1. Primers used in RT-PCR. Table S2. Antibodies used in this study. Table S3. sgRNA sequence of genes. Table S4. Inhibition rate and combination index of HCC1937 and MDA-MB-436 with single-agent or combined treatment.
DOI: 10.6084/m9.figshare.25213742
title: Datasets and models enclosed within the paper: Rapid Prediction of Conformationally-Dependent DFT-Level Descriptors using Graph Neural Networks for Carboxylic Acids and Alkyl Amines.

description: This Figshare repository contains the datasets and models for our paper titled: Rapid Prediction of Conformationally-Dependent DFT-Level Descriptors using Graph Neural Networks for Carboxylic Acids and Alkyl Amines. It is organized into 2D and 3D, which represent the modeling architectures used in building graph neural networks for molecular descriptors corresponding to acids and amines. Carboxylic acid, primary alkyl amine, and secondary alkyl amine (as well as a combined alkyl amine) libraries are provided in their entirety, including conformer properties. Additional test and external validation statistics for each library are also provided within this repository.
DOI: 10.6084/m9.figshare.25213742.v2
title: Datasets and models enclosed within the paper: Rapid Prediction of Conformationally-Dependent DFT-Level Descriptors using Graph Neural Networks for Carboxylic Acids and Alkyl Amines.

description: This Figshare repository contains the datasets and models for our paper titled: Rapid Prediction of Conformationally-Dependent DFT-Level Descriptors using Graph Neural Networks for Carboxylic Acids and Alkyl Amines. It is organized into 2D and 3D, which represent the modeling architectures used in building graph neural networks for molecular descriptors corresponding to acids and amines. Carboxylic acid, primary alkyl amine, and secondary alkyl amine (as well as a combined alkyl amine) libraries are provided in their entirety, including conformer properties. Additional test and external validation statistics for each library are also provided within this repository.
DOI: 10.6084/m9.figshare.18585864.v1
title: Additional file 8 of SLCO4A1-AS1 promotes colorectal tumourigenesis by regulating Cdk2/c-Myc signalling

description: Additional file 8: Table S6. A total of 754 regulated DEGs (|logFC|≧0.5) selected after both overexpression and knockdown of SLCO4A1-AS1 in two independent RNA sequencing data sets.