cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/grcdmwryy6.1
title: Opinions among stakeholders from Bac Settlement about sustainable urban regeneration, urban design and Integrative urban design play

description: The presented data provides insights into the perspectives of key stakeholders within the Bac community in Serbia regarding sustainable urban regeneration, urban design, and the role of integrative urban design. The data was collected subsequent to a collaborative workshop on "Integrative Urban Design Play for Urban Regeneration on Bac Suburbia" in 2010, during which the attendees acquired novel insights into participatory approaches for fostering sustainable urban revitalization. The objective of the survey was to assess the perspectives of the different stakeholders regarding the feasibility of introducing novel urban development approaches in regions that are under conservation protection. 

The efficacy of the "Integrative Urban Design Play" in addressing particular hurdles associated with wicked urban regeneration problems such as raising public awareness regarding the preservation, introduction, and promotion of essential values in protected suburban regions, was assessed through the administration of questionnaires. The questions were categorised into three groups: viewpoints on sustainable urban regeneration, perspectives on urban design, and perspectives on knowledge and preparation for future participation in the Integrative Urban Design Game. The collaborative effort between the Faculty of Architecture in Belgrade and the Municipality of Bac, Serbia, involved the implementation of an anonymous survey. This survey was disseminated to pertinent stakeholders representing the public, private, and civil sectors.
DOI: 10.17632/dbrj65khn6.1
title: Mudi River Dataset-contamination level and ecological risk assessment of selected heavy metals 

description: Mudi River Dataset-contamination level and ecological risk assessment of selected heavy metals
DOI: 10.5281/zenodo.8177974
title: BioRodDis project - Individual information on rodent samples - Jura (France) 2020/2022

description: This xlxs file contains 190 rodent individuals for which the serological statut for the Puumala (PUUV) orthohantavirus was assessed by immunofluorescence assay (IFA) and enzyme-linked immunosorbent assay (ELISA). The table is organized with the sequencing code in row and the different individual variables in column: Corresponding abbreviations: - CodeID : the unique identifier of each individual - Species: the rodent species - Locality: the sampling locations: La Glacière=”FRFGLA”, Mignovillard=”FRFMIG” - Sex: the sex (F=female; M=male) - Season: the season of sampling - Year: the year of sampling - Period: the season and year of sampling - Weight: the weight (g) - Body_length: the body length (cm) - Tail_length: the tail lenght (cm) - Testes_position: the testes position status (0/1) - Testes_length: the testes lenght (mm) - Seminal_ves_dev: the seminal vesicles development status(0/1) - Vulva: the vulva opening status (0/1) - Lactation: the lactation status (0/1) - Placental_scars: presence of placental scars (0/1) - Uterus_dev: the uterus development status (0/1) - Gestation: the gestation status (0/1) - Sexual_Maturity: the sexual maturity (Mature or immature) - IFA_PUUV: the PUUV serological status by IFA (0= negative; 1= positive) - Serology: the PUUV serological status by ELISA (0= negative; 1= positive)
DOI: 10.5281/zenodo.8177973
title: BioRodDis project - Individual information on rodent samples - Jura (France) 2020/2022

description: This xlxs file contains 190 rodent individuals for which the serological statut for the Puumala (PUUV) orthohantavirus was assessed by immunofluorescence assay (IFA) and enzyme-linked immunosorbent assay (ELISA). The table is organized with the sequencing code in row and the different individual variables in column: Corresponding abbreviations: - CodeID : the unique identifier of each individual - Species: the rodent species - Locality: the sampling locations: La Glacière=”FRFGLA”, Mignovillard=”FRFMIG” - Sex: the sex (F=female; M=male) - Season: the season of sampling - Year: the year of sampling - Period: the season and year of sampling - Weight: the weight (g) - Body_length: the body length (cm) - Tail_length: the tail lenght (cm) - Testes_position: the testes position status (0/1) - Testes_length: the testes lenght (mm) - Seminal_ves_dev: the seminal vesicles development status(0/1) - Vulva: the vulva opening status (0/1) - Lactation: the lactation status (0/1) - Placental_scars: presence of placental scars (0/1) - Uterus_dev: the uterus development status (0/1) - Gestation: the gestation status (0/1) - Sexual_Maturity: the sexual maturity (Mature or immature) - IFA_PUUV: the PUUV serological status by IFA (0= negative; 1= positive) - Serology: the PUUV serological status by ELISA (0= negative; 1= positive)
DOI: 10.17632/vkgzyz6997.1
title: Landscape of gut microbiota and metabolites and their interaction in comorbid heart failure and depressive symptoms: a random forest analysis study

description: ABSTRACT: Depression is an individual risk factor for poor prognosis in patients with heart failure (HF). Recent studies show that gut microbiota and metabolites have critical role in comorbid HF and depressive symptoms. We recruited 95 subjects including 35 HF patients with depressive symptoms (HF-DS), 36 HF patients without depressive symptoms (HF-NDS), and 24 healthy controls (HC). The 16S rRNA, metagenome sequencing, and untargeted metabolomic analysis were employed to test fecal samples. Our analysis found there was a significant difference composition of gut microbiota in HF-DS, HF-NDS, and HC populations. At the genus level, Mediterranea, Tolumona, and Parabacteroides were significantly increased in HF-DS patients compared with HF-NDS patients, while Pedobacter, Azospirillum, and Ruminiclostridium were significantly decreased. Furthermore, anti-inflammatory mediators (abietic acid, quinic acid, linoleic acid, etc.) and neurotransmitters (catechin, serotonin, tryptamine, phenylethylamine, etc.) were reduced in HF-DS. The enrichment analysis revealed that the gut microbiota highly conformed with the functional pathways of metabolites, and amino acid-related metabolism, fatty acid-related metabolism, and cAMP signaling pathways may be crucial biological mechanisms involved in the development of comorbid depression and HF. Finally, Cloacibacillus and alpha-tocopherol were determined as diagnostic markers for HF-DS patients.
DOI: 10.57995/6g9m-ve84
title: Data for: Who is best placed to support cyber responsibilized UK parents?   

description: Dataset relating to publication in Children - Who Is Best Placed to Support Cyber Responsibilized UK Parents?. This is data for a Q-Sort on factors relating to different support options in cybersecurity information for UK Parents.
DOI: 10.17632/5bhm89vsd2.1
title: Asymmetric Influences of Direction and Magnitude Information on Nonsymbolic Numbers Coding: Evidence from the SNARC Effect

description: 箭头方向和大小线索对非符号数字编码影响的不对称性：来自SNARC效应的证据实验数据
DOI: 10.17632/5bhm89vsd2.2
title: The SNARC Effect for Nonsymbolic Numbers is Not Observed When Stimuli Spatially Orient Attention

description: 箭头方向和大小线索对非符号数字编码影响的不对称性：来自SNARC效应的证据实验数据
DOI: 10.5066/p9yqj8b7
title: Geospatial data sets and hydraulic models for selected streams in Stark County, Ohio

description: Digital flood-inundation maps for selected streams in Stark County were created by the U.S. Geological Survey (USGS) in cooperation with the Muskingum Watershed Conservancy District and the Stark County Commissioners as part of a Federal Emergency Management Agency (FEMA) Flood Insurance Study (FIS). The flood-inundation maps show estimates of the areal extent corresponding to the 1% and 0.2% annual-exceedance probability floods. Flood profiles were computed for the stream reach by means of the one-dimensional step-backwater model.
DOI: 10.17632/h8gb4rvb2x.1
title: 2022 Daily German Retail Fuel Price Data

description: Daily average price data set, including station information. Based on Tankerkoenig data (available under Lisense CC BY-NC-SA 4.0 at https://dev.azure.com/tankerkoenig/_git/tankerkoenig-data).
DOI: 10.17632/dxmdzb86wz.1
title: MODEL DATA

description: These are the finite element modeling data sets for the model cases presented in the research article titled Seismic Retrofitting Options for Modernist Housing Blocks A Case Study in Ankara. ProtaStructure software.
DOI: 10.6084/m9.figshare.23736702
title: STAMPS 2023 example data

description: example files for the STAMPS 2023 GToTree tutorial: https://hackmd.io/@AstrobioMike/STAMPS2023-GToTree
DOI: 10.26207/yt4a-6s83
title: COVID-19 Vaccine Tobacco User Dissertation Data 2022
DOI: 10.25345/c5t43jc9c
title: MassIVE MSV000092510 - Global proteomics analysis of two ER+ breast cancer cell lines
title: Sample preparation for LC-MS analysis 5E5 ESR1 Mutant MCF-7 cells (8x Y537S and 8x D538G, 4x control, 4x Dex treated, total 16 samples) were collected, washed twice in PBS and lysed in 50 ul lysis buffer (2% sodium deoxycholate (SDC), 0.1 M TRIS, 10 mM TCEP, pH = 8.5) using strong ultra-sonication (10 cycles, Bioruptor, Diagnode). Protein concentration was determined by tryptophan fluorescence analysis (PMID: 25837572) using a small sample aliquot. Sample aliquots containing 50 ug of total proteins were reduced for 10 min at 95 C and alkylated at 15 mM chloroacetamide for 30 min at 37 C. After diluting samples 1:1 (v:v) using 0.1 M TRIS (pH=8.5), proteins were digested by incubation with sequencing-grade modified trypsin (1/50, w/w; Promega, Madison, Wisconsin) overnight at 37C. Then, the peptides were cleaned up using iST cartridges (PreOmics, Munich) according to the manufacturers instructions. Samples were dried under vacuum and stored at -80 C until further use. Sample aliquots comprising 5 ug of peptides were labeled with isobaric tandem mass tags (TMTpro 16-plex, Thermo Fisher Scientific) as described previously (PMID:27345528) using a Freedom Evo 100 liquid handling platform (Tecan Group Ltd., Mannedorf, Switzerland). Shortly, peptides were resuspended in 12.5 ul labeling buffer (2 M urea, 0.2 M HEPES, pH 8.3) and 2.5 uL of each TMT reagent were added to the individual peptide samples followed by a 1 h incubation at 25C, shaking at 500 rpm. The labelling reaction was quenched by adding 2 uL aqueous 0.75 M hydroxylamine solution and incubation for 5 min at 25C. After pooling, the pH of the obtained sample was increased to 11.9 by adding 1 M phosphate buffer (pH 12) and incubated for 20 min at 25C to remove TMT labels linked to peptide hydroxyl groups. Subsequently, the reaction was stopped by adding 2 M hydrochloric acid until a pH &lt; 2 was reached. Finally, the peptide sample was further acidified using 5 % TFA, desalted using Sep-Pak Vac 1cc (50 mg) C18 cartridges (Waters) according to the manufacturers instructions and dried under vacuum. TMT-labeled peptides were fractionated by high-pH reversed phase separation using a XBridge Peptide BEH C18 column (3,5 um, 130 A, 1 mm x 150 mm, Waters) on an Ultimate 3000 HPLC system (Thermo Fisher Scientific) at a flow rate of 42 ul/min. Peptides were loaded on column in buffer A and eluted using the following gradient: from 2% B to 15% B over 3 min to 45% B over 59 min to 80 % B over 3 min followed by 9 min at 80% B to 2% B over 2 min followed by 2 min at 2% B. Buffer A was 20 mM ammonium formate in water and buffer B was 20 mM ammonium formate in 90% acetonitrile. Both buffers were adjusted to pH 10. Elution of peptides was monitored with a UV detector (205 nm and 214 nm) and a total of 36 fractions were collected, pooled into 12 fractions using a post-concatenation strategy as previously described (PMID:21500348) and dried under vacuum.
DOI: 10.17632/fgv4mnpmcz.1
title: Removal of Hg(II) from Water by Adsorption onto the Fe3O4/GO-Zeolite Absorbent

description: This data includes raw data from the characterization of the Fe3O4/GO-Zeolite adsorbent and the results of the Hg(II) adsorption process.
DOI: 10.17632/w3v45f24m2.1
title: The data underlying the manuscript "eWOM Antecedents, University Reputation, eWOM Adoption, and Choosing Decision a Private Higher Education Institution: Use of the IAM and TPB"

description: We confirm that we refer to relevant studies in writing of the manuscript entitled "eWOM Antecedents, University Reputation, eWOM Adoption, and Choosing Decision a Private Higher Education Institution: Use of the IAM and TPB". 
1. Erkan, I., & Evans, C. (2016). The influence of eWOM in social media on consumers’ purchase intentions: An extended approach to information adoption. Computers in Human Behavior, 61(2016), 47-55. https://doi.org/10.1016/j.chb.2016.03.003. 
2. Sardar, A., Manzoor, A., Shaikh, K. A., & Ali, L. (2021). An empirical examination of the impact of eWom information on young consumers’ online purchase intention: Mediating role of eWom information adoption. SAGE Open, 11(4), 1-12. https://doi.org/10.1177/21582440211052547.
3. Mateus, M. A., & Acosta, F. J. (2022). Reputation in higher education: A systematic review. Frontiers in Education, 7(925117), 1-19. https://doi.org/10.3389/feduc.2022.925117. 
4. Ajzen, I. (1991). The theory of planned behavior. Organizational Behavior and Human Decision Processes, 50(2), 179-211. https://doi.org/10.1016/0749-5978(91)90020-T.
5. Abbas, J., Alturki, U., Habib, M., Aldraiweesh, A., & Al-Rahimi, W. M. (2021). Factors affecting students in the selection of country for higher education: A comparative analysis of international students in Germany and the UK. Sustainability, 13(18), 10065. https://doi.org/10.3390/su131810065.
6. Sussman, S. W., & Siegal, W. S. (2003). Informational influence in organizations: An integrated approach to knowledge adoption. Information Systems Research, 14(1), 47-65. https://doi.org/10.1287/isre.14.1.47.14767.
DOI: 10.17632/gzj9jz2cnv.1
title: Paper-based flow injection device with two-electrode detector

description: Prefix "HOLDER": STL files for 3D printed holders. The holders are best printed with an SLS 3D printer and accommodate spring connectors (5110/S-C-1.5N-AU-2.3 C, PTR Hartmann). There are two different types of device: static analyzer ("static") or flow injection analysis device ("FIA"). Each device comprise a top and bottom part.

Prefix "PAPERELEC": paper-based electrode design. All cut lines are cut into the wax layers. For the laser-pyrolyzed electrodes, the black design are engraved (i.e. pyrolyzed), and the alignment holes cut. All design, both for the static and FIA devices are included in a single file.

Prefix "CODE": (i) "CODE_microcontroller.ino.": arduino code for ATmega328P microcontroller. Embedded software to drive the smart reader. (ii) "CODE_GUI.py" Python3 code for the graphical user interface. Data from serial communication with the reader through USB communication.
DOI: 10.17632/hrnj8m65pm.1
title: eFF_simulation_of_proton_motion_in_H2

description: Here you can find three directories containing similar files for three different proton energies (10, 60, and 120 keV).

The files used by LAMMPS: in.h2 (task parameters), data.conf.$i.h2 (supercells).

Python scripts: sp_rw_v2.0.py (stopping power), hero_cut.py (to cut *.traj file for faster further treatment), and all 3 files in ./traj_container subdirectory (calculation of a spectrum).

Examples: dissipath.dat (calculated total stopping power), dissipath_list.dat (drop of the proton energy with the path).
DOI: 10.17632/n3cgckk6yx.1
title: Data for article: Economic Analysis of Heat Distribution Concepts for a small Solar District Heating System

description: This repository contains material specific to the article named in the title. 
The material includes input .dck files of the different simulation models for import into TRNSYS, including pipe calibration models and calculation sheets with values from the calibration simulation. 
Furthermore, there are some calculation sheets with economic calculations used for the life cycle costs and energy quantities used for the energy balance and sensitivity studies.
Some calculation reports from the cost calculation software Wikells are included, together with costs from tenders and price lists of manufacturers. 
Price quotes have been anonymised and the manufacturer product catalogues are not included, to avoid identification of the manufacturer. 
This because academic work should not contain information which may used for commercial purposes (e.g. use of academic work for marketing) or affect commercial conditions (e.g. disclosing information on price structure). 

Additional material, such as detailed model descriptions, method descriptions and calculations is available, from a related dataset from another article using the same system models, through the supplied link. 
This includes the calibration of the copper pipes used in the solar thermal system. 

Using the information supplied in the two repositories, it should be possible to get a proper understanding of the work done and to reproduce the results.
DOI: 10.17632/nfp87dbcdh.1
title: Identification of pathological pathways centered on circRNA dysregulation associated with early pathogenic progression of Alzheimer’s disease

description: The introns flanking the two BSJ sites of a given circRNA need to base-pair and bring the BSJs into close proximity, which in turn allow circRNA biogenesis.  In addition, specific RBPs often promote circRNA production by binding to the flanking intronic sequences and bring BSJs together via forming homodimers. siRNAs targeting the hnRNPL was transfected in Neuro 2A (N2a) cells. Depletion of the hnRNPL (Fig. 5h) caused a significant reduction of circRNA.

To experimentally validate circGigyf2-CPSF6 interactions, we performed circGigyf2 pulldown. A robust and specific CPSF6 enrichment was found in circGigyf2 pulldown (Fig. 7b). In contrast, QKI and TAR DNA-binding protein 43 (TDP-43), two RBPs that are not predicted to bind circGigyf2 strongly, were not detected in circGigyf2 pulldown (Fig. 7b). The non-RBP GAPDH was also absent (Fig. 7b).

western blots indicated marked elevation of PLAU protein levels in 7-month-old 5xFAD cortex as compared to age-matched littermate controls while no PLAU increase was observed in 5-month 5xFAD mouse (Fig. 7g).
DOI: 10.17632/46mjk7w5s4.1
title: Boca Raton Excavation Screen Size Element Counts

description: This data includes measurements and counts of faunal artifact bone elements collected using different size mesh screens.  The faunal bone artifacts came from an excavation in Boca Raton, FL.
DOI: 10.17632/rcxgmdxhbr.1
title: JUST Slewing bearing datasets-2

description: This is a continuation of JUST Slewing bearing datasets-1, with additional details described in  JUST Slewing bearing datasets-1.
DOI: 10.17632/wk5t9vj5r5.1
title: Prevention against mastitis of dairy animals: In vitro and in vivo evaluation of "MASTIN", a novel edible bismuth-free lipid-based internal teat sealant

description: This Supplementary Materials dataset contains:
1. Video files (n=2) of the administration process of the internal teat sealant MASTIN in dairy ewes' teats.
2. Table 2: Comparison of the mean Numerical Pixel Value (NPV) from ultrasound images of the internal area of the teat cistern between the left and right teat of the dairy ewes, from Day 0 (before the administration of the teat sealant) until Day 120 in non-lactating period.
3. Table 3: Comparison of the mean Numerical Pixel Value (NPV) from ultrasound images of the internal area of the teat cistern between Groups B, C and Control Group, from Day 0 (before the administration of the teat sealant) until Day 120 in non-lactating period.
4. Fig. 9. Hemolysis rate of various concentrations of the produced oleofoams (0.5, 1, and 2 mg/mL) presented along with the control (Triton-X) and the negative control (PBS) samples. Inset: Digital images of the erythrocyte extract after incubation with the Triton-X, PBS and oleofoams.
DOI: 10.6084/m9.figshare.23666733
title: Supplementary Material for: A meta-analysis of neurodevelopmental outcomes following intravitreal bevacizumab for the treatment of retinopathy of prematurity

description: Background: Retinopathy of prematurity (ROP) is the most common cause of preventable blindness in preterm infants. First-line treatments include intravitreal bevacizumab (IVB) or laser photocoagulation (LPC). Objectives: To evaluate neurodevelopmental safety of IVB compared to LPC for ROP. Methods: MEDLINE, EMBASE and Cochrane were searched up to September 2022. Studies were included with at least 12-month follow-up of primary outcomes such as severe neurodevelopmental impairment (sNDI), cerebral palsy (CP), and hearing impairment (HI). Secondary outcomes were moderate-to-severe impairment (msNDI), Bayley Scores of Infant Development (BSID-III) and visual impairment. Results: 1231 patients from 11 comparative studies were included. Quality of evidence was rated low for all outcomes. IVB was associated with a higher risk for sNDI (risk ratio [RR]=1.25, 95% confidence interval [CI] 1.01, 1.53, P=0.04) and CP (RR=1.40, CI [1.08, 1.81], P=0.01) compared to LPC. There was no significant difference between IVB and LPC for msNDI (RR=1.15, CI [0.98, 1.35], P=0.08) and HI (RR=1.43, CI [0.86, 2.39], P=0.17). BSID-III percentile scores were similar between IVB and LPC, with weighted mean differences of 1.51 [CI=-1.25, 4.27], 2.43 [CI=-1.36, 6.22] and 1.97 [CI=-1.06, 5.01] for cognitive, language, and motor domains, respectively (P&gt;0.05). Conclusion: To our knowledge, this is the largest meta-analysis on neurodevelopmental outcomes and the first to rigorously examine IVB monotherapy in ROP treatment. Compared to LPC, there was a marginally increased risk for sNDI and CP with IVB but little or no difference in the risk of msNDI and HI. Further randomized studies are needed to strengthen these findings.
DOI: 10.17632/m9hczgj2w2.1
title: Dr. Mojdeh Abolmolouki-Raw Data

description: There are the data of Dr. Mojdeh Abolmolouki, Email: mojdeh.abolmolouki@gmail.com
I help her submitting her scientific article
DOI: 10.17632/33c5j3jjt9.1
title: Prevalence and Risk Factors for Chlamydia trachomatis Infection among Women in Southwest Algeria

description: Prevalence and Risk Factors for Chlamydia trachomatis Infection among Women in Southwest Algeria
DOI: 10.17632/srp4rhjkmy.1
title: Data-to-Music UES Surveys by the D2M Research Team at TAUCHI 

description: Data-to-Music User Engagement Surveys (UES). Three surveys presented in a single musical context: 1) Melody, 2) Chords, 3) Rhythm.  There are three Conditions: a) pure tones, b) tones with timbre, and c) tones with timbre and rhythm.  24 participants per survey (N=72). IRB exemption provided by Eastern Washington University (human subjects protocol HS-5429 on December 1, 2017.  Survey statements questionnaire based on User Engagement Survey developed by O'Brien and Toms (2008&2010), with a 5 step Likert scale.
Hypothesis: Engagement levels are elevated from data sonifications (for auditory display) with musical characteristics.
DOI: 10.17632/srp4rhjkmy.2
title: Data-to-Music UES Surveys by the D2M Research Team at TAUCHI (Tampere University)

description: Data-to-Music User Engagement Surveys (UES). Three surveys presented in a single musical context: 1) Melody, 2) Chords, 3) Rhythm.  There are three Conditions: a) pure tones, b) tones with timbre, and c) tones with timbre and rhythm.  24 participants per survey (N=72). IRB exemption provided by Eastern Washington University (human subjects protocol HS-5429 on December 1, 2017).  Survey statements questionnaire based on User Engagement Survey developed by O'Brien and Toms (2008&2010), with a 5 step Likert scale.
Hypothesis: Engagement levels are elevated from data sonifications (for auditory display) with musical characteristics.