cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14457/vru.res.2010.1
title: คุณภาพชีวิตในการทำงานกับความผูกพันต่อองค์กรของพนักงานมหาวิทยาลัยสายวิชาการ มหาวิทยาลัยราชภัฏวไลยอลงกรณ์ ในพระบรมราชูปถัมภ์ ปีพุทธศักราช 2553
DOI: 10.14457/vru.res.2020.6
title: นวัตกรรมเพื่อการพัฒนาศักยภาพชุมชนแบบมีส่วนร่วมอำเภอคลองหลวง จังหวัดปทุมธานี
DOI: 10.14457/vru.res.2017.2
title: ประสิทธิภาพความรับผิดชอบต่อสังคม และการพัฒนาคู่มือแนวทางการจัดทำรายงานการพัฒนาอย่างยั่งยืนของมหาวิทยาลัยราชภัฏ
DOI: 10.14457/vru.res.2020.7
title: รูปแบบความสัมพันธ์เชิงสาเหตุของการร่วมสร้างคุณค่า ภาพลักษณ์ความพึงพอใจที่ส่งผลต่อความภักดีของนักศึกษามหาวิทยาลัยราชภัฏ
DOI: 10.14457/vru.res.2020.8
title: วิถีชีวิตและอัตลักษณ์ชุมชน อำเภอคลองหลวง จังหวัดปทุมธานี
DOI: 10.14457/vru.res.2017.3
title: ศักยภาพชุมชนและการจัดการท่องเที่ยวเชิงเกษตรอย่างยั่งยืนในภาคกลาง
DOI: 10.14457/vru.res.2007.3
title: อิทธิพลของโลหะหนักที่มีผลต่อสาหร่ายสไปรูไลนา
DOI: 10.14457/vru.res.2020.9
title: แนวทางการพัฒนาการท่องเที่ยวแบบฟาร์มสเตย์ตามศาสตร์พระราชาของจังหวัดสระแก้ว
DOI: 10.48370/ofd/imxtxl/5rdew1
title: 2371.S3Dm

description: :unav
DOI: 10.48370/ofd/imxtxl
title: Peniophorella pubera (Fr.) P. Karst., 2371

description: Fungarium Makromycetes
DOI: 10.48370/ofd/qztwt2/6om03h
title: 2501.S3Dm

description: :unav
DOI: 10.48370/ofd/qztwt2
title: Peniophorella pubera (Fr.) P. Karst., 2501

description: Fungarium Makromycetes
DOI: 10.48370/ofd/o4sq1x/1zcjdu
title: 2550.S3Dm

description: :unav
DOI: 10.48370/ofd/o4sq1x
title: Peniophorella pubera (Fr.) P. Karst., 2550

description: Fungarium Makromycetes
DOI: 10.4121/14431418
title: Data underlying the publication: Designing a flexible method selection tool for the inclusion of soil biology measurements in the assessment of soil multi-functionality

description: These datasets represent the input of a user-flexible tool to support decision-making during the selection process of soil biological methods for monitoring soil functions. <br>The decision support tool is based on a structured and conceptual framework that connects soil biota to soil functions through their contribution to different soil processes.In the second version of this dataset, the files Supplementary information Methods references.xlsx and Supplementary information_Methods_scores.csv were updated.<br>
DOI: 10.4121/14431418.v2
title: Data underlying the publication: Designing a flexible method selection tool for the inclusion of soil biology measurements in the assessment of soil multi-functionality

description: These datasets represent the input of a user-flexible tool to support decision-making during the selection process of soil biological methods for monitoring soil functions. <br>The decision support tool is based on a structured and conceptual framework that connects soil biota to soil functions through their contribution to different soil processes.In the second version of this dataset, the files Supplementary information Methods references.xlsx and Supplementary information_Methods_scores.csv were updated.<br>
DOI: 10.4121/14431418.v1
title: Data underlying the publication: Designing a flexible method selection tool for the inclusion of soil biology measurements in the assessment of soil multi-functionality

description: These datasets represent the input of a user-flexible tool to support decision-making during the selection process of soil biological methods for monitoring soil functions. <br>The decision support tool is based on a structured and conceptual framework that connects soil biota to soil functions through their contribution to different soil processes.
DOI: 10.21942/uva.18865448
title: RDM-Photo-activated thin films of porphyrins for reactive oxygen species generation

description: <b>Photo-activated thin films of porphyrins for reactive oxygen species generation</b><b><br></b> <b>Dáire J. Gibbons,<sup>a, b</sup> Alexandre Boh,<sup>c</sup> Benoit Habermeyer,<sup>c</sup></b> <b>Nicolas Villandier,<sup>a</sup> Stéphanie Leroy-Lhez*<sup>a</sup></b> and <b>René M. Williams*<sup>b</sup></b> Journal of Porphyrins and Phthalocyanines<br><br>
DOI: 10.21942/uva.18865448.v2
title: RDM-Photo-activated thin films of porphyrins for reactive oxygen species generation

description: <b>Photo-activated thin films of porphyrins for reactive oxygen species generation</b><b><br></b> <b>Dáire J. Gibbons,<sup>a, b</sup> Alexandre Boh,<sup>c</sup> Benoit Habermeyer,<sup>c</sup></b> <b>Nicolas Villandier,<sup>a</sup> Stéphanie Leroy-Lhez*<sup>a</sup></b> and <b>René M. Williams*<sup>b</sup></b> Journal of Porphyrins and Phthalocyanines<br><br>
DOI: 10.21942/uva.18865448.v1
title: RDM-Photo-activated thin films of porphyrins for reactive oxygen species generation

description: <b>Photo-activated thin films of porphyrins for reactive oxygen species generation</b><b><br></b> <b>Dáire J. Gibbons,<sup>a, b</sup> Alexandre Boh,<sup>c</sup> Benoit Habermeyer,<sup>c</sup></b> <b>Nicolas Villandier,<sup>a</sup> Stéphanie Leroy-Lhez*<sup>a</sup></b> and <b>René M. Williams*<sup>b</sup></b> Journal of Porphyrins and Phthalocyanines<br><br>
DOI: 10.6084/m9.figshare.16578881
title: Activity time data.xlsx

description: Data on diel activity patterns of skinks, collected from primary literature sources and personal observations in the field. Species are categorised under one of three character states, and references are given to the sources of the data.
DOI: 10.17894/ucph.66a5590d-5732-445e-95bf-64a6624860f4
title: Assessing flower-visiting arthropod diversity in apple orchards through environmental DNA flower metabarcoding and visual census

description: This file contains a summary of all the supplemental material contained in supplemental_information folder. 1. Supp1- Supplemental Tables S1 to S13 2. Supp2- Supplemental 2- Figures S1 to S2 3. rawdata.tgz- Raw sequence files from AllGenetics 4. cutadapt_OBItools.zip: Cutadapt trimmed files for OBITool 5. My_code_pollinators.bash: Bioinformatic script used to generate metabarcoding data contained in Supp1 6. paper_Rscript- R scripts used to generate metabarcoding and visual census data (Rmd) contained in Supp1 and Supp2 7. paper_Rscript- R scripts used to generate metabarcoding and visual census data (html) contained in Supp1 and Supp2 8. paper_Rscript.zip- .csv files used for stats test on R-studio. From TableI1 to TableI8
DOI: 10.15151/esrf-es-649776694
title: Distribution of macroscopic and intergranular residual stresses in Wire Arc Additively Manufactured structures

description: Wire Arc Additive Manufacturing (WAAM) is a promising additive manufacturing technique that allows for structures to be built with a high degree of freedom of design and repair large components. Residual stress induced by high temperature gradients are one of the main limiting factors affecting mechanical performance of WAAM parts. An analysis of the residual stress distribution within WAAM Ti-6Al-4V parts using synchrotron energy dispersive diffraction will allow to calibrate simulation tools and to optimize the process. The proposed study aims to characterize the macroscopic residual stress and intergranular stress distribution in WAAM parts produced with different interlayer times; and to determine the variation of residual stress at the interface between WAAM part and substrate, and at internal WAAM interfaces within the individual layers.
DOI: 10.15151/esrf-es-649171083
title: XANES of high-pressure water with X-ray Raman spectroscopy
DOI: 10.15151/esrf-es-649778080
title: Southampton, Bristol, Exeter, KCL, Portsmouth, UCL Royal Free Block Allocation Group (BAG)

description: This BAG coordinates activities of groups from the South-West of the UK. The focus is on projects in Immunology, transcriptional regulation, and enzymology. A particular strength are the macromolecular complexes that several of the groups target. The activities in rational protein design (Bristol) and enzyme design (Portsmouth) are particular highlight and have enriched the portfolio of projects of this ag since joining in 2020.
DOI: 10.15151/esrf-es-644087723
title: Proteins and protein/DNA/RNA complexes involved in biosynthesis, protein folding and degradation, splicing, cancer, host pathogen interacti
DOI: 10.15151/esrf-es-645856048
title: The Netherlands BAG
DOI: 10.15151/esrf-es-645857601
title: BAG for the Structural Biology Groups in Madrid

description: This proposal is a collaborative effort of the Structural Biology Groups of Madrid with the objective to form a strong core of scientist devoted to this area of research in Spain. It is composed of 18 groups distributed in 4 Institutes.
DOI: 10.15151/esrf-es-650701714
title: Universities of St Andrews, Dundee and Glasgow

description: The Dundee/St Andrews/Glasgow BAG continues to move forward with fundamental research into a range biological processes. Early stage drug discovery remains a key research interest where structural data can inform on target assessment and support compound screening and medicinal chemistry projects. Projects across the BAG include:- characterization of enzymes producing natural products or involved in biocatalysis; antibiotic discovery; enzyme kinetics and regulation; the role of O-GlcNAc modification in cytosolic proteins; RNA structure and DNA junctions; ubiquitin signalling and transfer; bacterial type 6 secretion system; protein degradation and protein-protein interactions; pseudokinase regulation of the innate immune response. Synchrotron beamtime provides us with increased throughput, resolution, and quality of data to drive our research forward, optimising and clarifying diffraction data collected in-house, and complementing a range of other biophysical research techniques.
DOI: 10.15151/esrf-es-652751579
title: ITABAG: 3D structures of macromolecules related to human health

description: The ITABAG includes structural biologists from Universities, National Research Council and Hospital research centres in Italy. The laboratories apply various diffraction methods to study the structure-function relationships in various macromolecules. A unifying factor for the vast majority of the macromolecules under study is that they are related to human health, either directly, being human proteins involved in some disease, or indirectly, as proteins expressed by human pathogens and validated as potential pharmacological targets. Other projects investigate basic chemical processes, such as crystal growth and polymer association and formation of nanostructures.
DOI: 10.15151/esrf-es-705875229
title: setting crl

description: setting crl
DOI: 10.15151/esrf-es-642714737
title: Cryo-electron microscopy EPN BAG

description: At the EPN campus level structural biology work is carried out in all the 4 institutes (IBS, ESRF, ILL and EMBL). Today all structural biology groups are turning to cryo-EM. The EM demand is therefore extremely high and present in the 4 Institutes. In a nutshell, there are 42 PIs that could benefit from Krios time on the EPN campus (more than 90 different samples). Around 20 % of the sample are ready for high resolution data collection with already prepared grids that have been pre-screened on Glacios microscopes. Whereas some work could be carried out on Glacios microscopes, for difficult samples the use of a krios is indispensable (heterogeneous sample or limited concentration requiring a large number of images; small protein etc). Only these samples will be selected for Krios time at the BAG level.
DOI: 10.15151/esrf-es-657590245
title: XRD of hydrogen above 200 GPa: structural changes associated to Phase III and Phase IV.

description: This proposal aims at measuring the structural changes and the EoS of hydrogen up to above 400 GPa. Various advances can now provide a game-changer in the structural study of hydrogen: the reopening of the beamline ID27 on the new EBS (Extremely Brilliant Source) with a submicrom beamsize; the availability of a state of the art detector (Eiger2 CdTe 9M from Dectris); the possibility to generate pressure above 400 GPa on a 6 µm diameter sample using toroidal diamond anvil. We plan to investigate the structural properties of phase IV above 220 GPa up to 400 GPa and of phase III above 180 GPa at 80 K.
DOI: 10.15151/esrf-es-649350597
title: The Israeli BAG

description: The BAG includes numerous principal investigators which are the majority of structural biologists in Israel. The scientific topics are diverse and so different that depicting them in a short Abstract is extremely difficult. In this context BAG members are studying the parameters that govern protein assemblage, structural impacts of signaling processes in different cascades, Thermodynamics of proteolytic reaction. In addition, we have the ribosome project and the design of unique antibiotics with specific functional interactions from the mycinamycins family and their resistance related mechanism compared with other macrolides and the photosystem and how it converts light into energy. The current events promote several Covid-19 related projects but BAG members are and have been involved and virus infection and inhibitory strategies including Hepatitis C virus, arthropod borne viruses (e.g .dengue, West Nile, Zika, Israel Turkey Meningoencephalitis), chikungunya virus and more.
DOI: 10.15151/esrf-es-685576317
title: Structural characterization of cerasomes

description: The idea is to characterize cerasomes particles. Such objects are 200 nm micelles with a mono- or bilayer of silanol lipids (&lt;5 nm) suspended in water. Their surface is partly rigid thanks to silanol crosslinking, still those are "soft glass bubbles" and can be used for a variety of application in chemistry or biology, mainly for drug delivery. We would be interested by checking the bi- or mono- layer thickness of those micelles, indeed batch and microfluidic reactors were used for the synthesis of cerasomes and they seem to have different rigidity and therefore different layer thickness. Only SAXS would allow to characterize such dimension.
DOI: 10.6073/pasta/623e5ed6413677ea5aa9b06a768a36c8
title: Measurement of Fuel load (organic biomass) Quantities of Organic Soils, Understory Plants and Trees at Sites within the Bonanza Creek LTER Regional Site Network in Interior Alaska, 2019

description: This dataset contains fuel load measurements for a subset of the BNZ LTER's RSN sites (n = 28). The data for each site separted by 16 fuel types (or plant functional types) including organic soil layers (fibric, mesic), vascular understory (evergreen shrub, short deciduous shrub, graminoid, forb, tall deciduous shrub, tree seedling/sapling, dead-downed wood), nonvascular understory (feather moss, Sphagnum moss, colonizer moss, lichen) and trees (evergreen tree, deciduous tree).
DOI: 10.6073/pasta/9aedb3019f4c39b5cf37bfb3e43b121b
title: Measurement of Plant Traits on Hylocomium splendens Samples Collected at Sites within the Bonanza Creek LTER Regional Site Network in Interior Alaska, 2019

description: This dataset contains measurements of plant traits on Hylocomium splendens species collected at a subset of sites from the Regional Site Network (n = 26). The two species, Hylocomium splendens and Vaccinium uliginosum, are the two most ubiquitous nonvascular and vascular species at these sites. The traits measured on these species relate to the fire ecology of each species. Traits measured for Hylocomium splendens include: length, width, aspect ratio (width/length), specific leaf area (SLA) and moisture content % at maximum water retention capacity. There is a corresponding dataset with trait data for Vaccinium uliginosum.
DOI: 10.15151/esrf-es-643214262
title: Russian BAG for Xtallography and BioSAXS
DOI: 10.15151/esrf-es-646013822
title: Munich Crystallography BAG

description: The diverse groups of the Munich Crystallography BAG study a far range of subjects, reaching from structural aspects of fundamental cellular processes - such as RNA processing, protein folding and degradation, DNA repair, chromatin remodelling, enzymes - to the design of foldamers. The research groups are located at the LMU and TUM universities in Munich, at the Max-Planck-Institute of Biochemistry, Martinsried, and the Helmholtz Center, Neuherberg. Out-groups are located at the universities in Darmstadt and Ulm, Germany. The research groups use X-ray crystallography, single-particle cryo-EM, SAXS, NMR and HDX and XL-MS mass-spectrometry for structural studies.
DOI: 10.15151/esrf-es-649173307
title: NORWAY BAG

description: The fifteen PIs associated to this proposal represent the entire crystallography community in Norway and are affiliated to the major Norwegian universities. The research interests of the PIs and their collaborators revolves around topics linked to structural biology and material sciences. We apply for beam time for single- and multi-wavelength MX, Bio-SAXS and Cryo-EM, in support of our research projects funded e.g. by the Research Council of Norway and the ERC. Examples of research projects or topics are carbohydrate-active proteins of medical or bioeconomic relevance, inhibition of DNA repair enzymes, metalloprotein function and catalysis, regulation of cell-cycle processes, enzyme discovery, antibiotic resistance/drug-discovery and neurological diseases. Our overarching aim is to use bright synchrotron sources to produce high quality science.
DOI: 10.15151/esrf-es-644972092
title: Heidelberg BAG (HeidelBAG)

description: The HeidelBAG unifies structural efforts of the EMBL, the Heidelberg University Biochemistry Center (BZH), and the German Cancer Research Center (DKFZ). Central to all projects are large assemblies involved in chromosome organization and transcription control, in nuclear and cytoplasmic RNA regulation, in translational control as ribosome associated factors or further on in protein targeting, membrane protein insertion or post-translational modification. As new members, Mandy Jeske from BZH adds projects on early embryonic development in Drosophila and Erec Stebbins from DKFZ on immune evasion of the African trypanosome T. brucei. Nearly all projects make use of integrated structural biology techniques (MX, SAXS/SANS, NMR, cryo-EM) combined with complementary biophysical, biochemical and cell biological approaches, a strategy that warrantied the continuous success of the BAG. More and more pathological implications of the studied central cellular processes come into focus.
DOI: 10.15151/esrf-es-657589207
title: Superionic water at high pressures and temperatures

description: The aim of this proposal is to explore the structural properties and P-T boundaries of the superionic phases of water, as a continuation of our previous runs HC-2185 and HC-3952. In run HC-2185, using CO2 laser heating, we were able to determine the melting curve of water up to 45 GPa and evidence the transition to the superionic bcc ice [1]. In run HC-3952 we extended the investigated pressure range to 166 GPa using YAG laser heating and observed the bcc-fcc transition at two pressures, 100 and 166 GPa. The aim of the present proposal is to map in more details the bcc-fcc transition line from 50 to 200 GPa and extend the melting line measurement of superionic ice up to 200 GPa. This will allow us to extract the thermodynamics of each phase transition from which it can be determined the molecular or superionic nature.
DOI: 10.5281/zenodo.6346604
title: Accipiter rufitorques decontaminated FSCR

description: .
DOI: 10.6073/pasta/b916266914e3b0afc10239a377ca15fd
title: Measurement of Plant Traits on Vaccinium uliginosum Samples Collected at Sites within the Bonanza Creek LTER Regional Site Network in Interior Alaska, 2019

description: This dataset contains measurements of plant traits on Vaccinium uliginosum species collected at a subset of sites from the Regional Site Network (n = 26). The two species, Hylocomium splendens and Vaccinium uliginosum, are the two most ubiquitous nonvascular and vascular species at these sites. The traits measured on these species relate to the fire ecology of each species. Traits measured for Vaccinium uliginosum include: rhizome depth, number of rhizomes, plant height, moisture content % of aboveground tissues, aboveground tissue ratios and dry mass of leaves. There is a corresponding dataset with trait data for Hylocomium splendens.
DOI: 10.5281/zenodo.6346603
title: Accipiter rufitorques decontaminated FSCR

description: .
DOI: 10.5281/zenodo.3769174
title: Conformational maps of human 20S proteasomes reveal PA28- and immuno-dependant inter-ring crosstalks

description: Data and R scripts associated to the HDX-MS analysis of the 20S core particule and its PA28 regulators: Here, we used for the first time Hydrogen-Deuterium eXchange coupled to Mass Spectrometry (HDX-MS) to investigate conformational differences between the human standard 20S (std20S) and immuno 20S (i20s) proteasomes alone or in complex with PA28αβ or PA28γ activators. Their solvent accessibility (in the form of deuteration kinetics) were analysed through a dedicated bioinformatic pipeline including stringent statistical analysis and 3D visualisation. These data confirmed the existence of allosteric differences between the std20S and i20S at the surface of the α-ring triggered from inside the catalytic β-ring. Additionally, binding of the PA28 regulators to the 20S proteasomes modified solvent accessibility due to conformational changes of the β-rings. This work is not only a proof of concept that HDX-MS can be used to get structural insights on large multi-protein complexes in solution, it also demonstrates that the binding of the std20S or i20S subtype to any of its PA28 activator triggers allosteric changes that are specific to this 20S/PA28 pair, in terms of the regions affected.
DOI: 10.5281/zenodo.3764505
title: Conformational maps of human 20S proteasomes reveal PA28- and immuno-dependant inter-ring crosstalks

description: Data and R scripts associated to the HDX-MS analysis of the 20S core particule and its PA28 regulators: Here, we used for the first time Hydrogen-Deuterium eXchange coupled to Mass Spectrometry (HDX-MS) to investigate conformational differences between the human standard 20S (std20S) and immuno 20S (i20s) proteasomes alone or in complex with PA28αβ or PA28γ activators. Their solvent accessibility (in the form of deuteration kinetics) were analysed through a dedicated bioinformatic pipeline including stringent statistical analysis and 3D visualisation. These data confirmed the existence of allosteric differences between the std20S and i20S at the surface of the α-ring triggered from inside the catalytic β-ring. Additionally, binding of the PA28 regulators to the 20S proteasomes modified solvent accessibility due to conformational changes of the β-rings. This work is not only a proof of concept that HDX-MS can be used to get structural insights on large multi-protein complexes in solution, it also demonstrates that the binding of the std20S or i20S subtype to any of its PA28 activator triggers allosteric changes that are specific to this 20S/PA28 pair, in terms of the regions affected.