cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6254432.v1
title: Additional file 2: of Waveband specific transcriptional control of select genetic pathways in vertebrate skin (Xiphophorus maculatus)

description: Table S2a–k. A list of all differentially modulated genes used by IPA enrichment software to predict the direction of change for each functional class represented in Additional file 1: Table S1. Table a is FL, tables b–e are the 50 nm wavebands and tables g–k are the 10 nm wavebands. (ZIP 701 kb)
DOI: 10.6084/m9.figshare.6254450
title: Additional file 3: of Waveband specific transcriptional control of select genetic pathways in vertebrate skin (Xiphophorus maculatus)

description: Table S3. A complete list of all NanoString targets and probe sequences used to verify the RNA-Seq data for each waveband exposure. (ZIP 242Â kb)
DOI: 10.6084/m9.figshare.6254450.v1
title: Additional file 3: of Waveband specific transcriptional control of select genetic pathways in vertebrate skin (Xiphophorus maculatus)

description: Table S3. A complete list of all NanoString targets and probe sequences used to verify the RNA-Seq data for each waveband exposure. (ZIP 242Â kb)
DOI: 10.6084/m9.figshare.6254465
title: Additional file 4: of Waveband specific transcriptional control of select genetic pathways in vertebrate skin (Xiphophorus maculatus)

description: Table S4a–k. A list of all differentially modulated genes used by IPA enrichment software to predict the direction of change for each functional class represented in Fig. 4. Table a is FL, tables b–e are the 50 nm wavebands and tables g–k are the 10 nm wavebands. (ZIP 262 kb)
DOI: 10.6084/m9.figshare.6254465.v1
title: Additional file 4: of Waveband specific transcriptional control of select genetic pathways in vertebrate skin (Xiphophorus maculatus)

description: Table S4a–k. A list of all differentially modulated genes used by IPA enrichment software to predict the direction of change for each functional class represented in Fig. 4. Table a is FL, tables b–e are the 50 nm wavebands and tables g–k are the 10 nm wavebands. (ZIP 262 kb)
DOI: 10.6084/m9.figshare.6254480
title: Additional file 5: of Waveband specific transcriptional control of select genetic pathways in vertebrate skin (Xiphophorus maculatus)

description: Table S5a–k. A list of all differentially modulated genes used by IPA enrichment software to predict the direction of change for each functional class represented in Fig. 6. Table a is FL, tables b–e are the 50 nm wavebands and tables g–k are the 10 nm wavebands. (ZIP 77 kb)
DOI: 10.6084/m9.figshare.6254480.v1
title: Additional file 5: of Waveband specific transcriptional control of select genetic pathways in vertebrate skin (Xiphophorus maculatus)

description: Table S5a–k. A list of all differentially modulated genes used by IPA enrichment software to predict the direction of change for each functional class represented in Fig. 6. Table a is FL, tables b–e are the 50 nm wavebands and tables g–k are the 10 nm wavebands. (ZIP 77 kb)
DOI: 10.6084/m9.figshare.6257510
title: Supplementary data from Metal-free C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> ternary heterostructures: synthesis and enhanced visible-light-driven photocatalytic performance.

description: A metal-free C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> nanoheterostructure with excellent visible-light photocatalysis for rhodamine B (Rh B) degradation has been reported. Via a convenient low-temperature solution-phase method, g-C<sub>3</sub>N<sub>4</sub> nanosheets can serve as substrate for dispersion of C<sub>60</sub>/CNTs. The loading of C<sub>60</sub>/CNTs onto g-C<sub>3</sub>N<sub>4</sub> nanosheets surfaces significantly enhanced visible-light-driven photocatalytic activity of g-C<sub>3</sub>N<sub>4</sub> catalyst, for oxidation of organic pollutant (Rh B, 100%). Excellent photocatalytic properties of C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> can be predominantly attributed to the intimate interfacial contact among constructing compounds, increased specific surface area and enhanced light adsorption efficiency resulted from C<sub>60</sub>/CNTs carbon materials. Particularly, the synergistic heterostructure interaction remarkably hinders the electrons–holes pairs recombination, giving rise to significantly enhanced photocatalytic performance of C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> in comparison with other counterparts.
DOI: 10.6084/m9.figshare.6257510.v2
title: Supplementary data from Metal-free C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> ternary heterostructures: synthesis and enhanced visible-light-driven photocatalytic performance.

description: A metal-free C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> nanoheterostructure with excellent visible-light photocatalysis for rhodamine B (Rh B) degradation has been reported. Via a convenient low-temperature solution-phase method, g-C<sub>3</sub>N<sub>4</sub> nanosheets can serve as substrate for dispersion of C<sub>60</sub>/CNTs. The loading of C<sub>60</sub>/CNTs onto g-C<sub>3</sub>N<sub>4</sub> nanosheets surfaces significantly enhanced visible-light-driven photocatalytic activity of g-C<sub>3</sub>N<sub>4</sub> catalyst, for oxidation of organic pollutant (Rh B, 100%). Excellent photocatalytic properties of C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> can be predominantly attributed to the intimate interfacial contact among constructing compounds, increased specific surface area and enhanced light adsorption efficiency resulted from C<sub>60</sub>/CNTs carbon materials. Particularly, the synergistic heterostructure interaction remarkably hinders the electrons–holes pairs recombination, giving rise to significantly enhanced photocatalytic performance of C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> in comparison with other counterparts.
DOI: 10.6084/m9.figshare.6257510.v1
title: Supplementary data from Metal-free C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> ternary heterostructures: synthesis and enhanced visible-light-driven photocatalytic performance

description: A metal-free C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> nanoheterostructure with excellent visible-light photocatalysis for rhodamine B (Rh B) degradation has been reported. Via a convenient low-temperature solution-phase method, g-C<sub>3</sub>N<sub>4</sub> nanosheets can serve as substrate for dispersion of C<sub>60</sub>/CNTs. The loading of C<sub>60</sub>/CNTs onto g-C<sub>3</sub>N<sub>4</sub> nanosheets surfaces significantly enhanced visible-light-driven photocatalytic activity of g-C<sub>3</sub>N<sub>4</sub> catalyst, for oxidation of organic pollutant (Rh B, 100%). Excellent photocatalytic properties of C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> can be predominantly attributed to the intimate interfacial contact among constructing compounds, increased specific surface area and enhanced light adsorption efficiency resulted from C<sub>60</sub>/CNTs carbon materials. Particularly, the synergistic heterostructure interaction remarkably hinders the electrons–holes pairs recombination, giving rise to significantly enhanced photocatalytic performance of C<sub>60</sub>/CNTs/g-C<sub>3</sub>N<sub>4</sub> in comparison with other counterparts.
DOI: 10.6084/m9.figshare.6262319
title: Additional file 1: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S1. Comparison of expression profiles of random selected 21 genes by RNA-seq and qRT-PCR data. Twenty one genes were randomly selected from the genes differentially regulated, and examined for their expression at 5Â days post-inoculation using. The results were the average from three biological replicates. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.6262319.v1
title: Additional file 1: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S1. Comparison of expression profiles of random selected 21 genes by RNA-seq and qRT-PCR data. Twenty one genes were randomly selected from the genes differentially regulated, and examined for their expression at 5Â days post-inoculation using. The results were the average from three biological replicates. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.6262337
title: Additional file 2: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S2. Statistics of DEG sequencing. The data quality assessment of sample sequencing output is detailed in the table. Raw reads: statistics of original sequence data. Clean data/clean reads: after filtering the raw data, the remaining data of the low quality data is removed. Subsequent analyses are based on clean data. Q20, Q30: calculate the percentage of bases of Phred value greater than 20 and 30, respectively. GC content: the total amount of base G and C is calculated as a percentage of the total bases. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.6262337.v1
title: Additional file 2: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S2. Statistics of DEG sequencing. The data quality assessment of sample sequencing output is detailed in the table. Raw reads: statistics of original sequence data. Clean data/clean reads: after filtering the raw data, the remaining data of the low quality data is removed. Subsequent analyses are based on clean data. Q20, Q30: calculate the percentage of bases of Phred value greater than 20 and 30, respectively. GC content: the total amount of base G and C is calculated as a percentage of the total bases. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.6262361
title: Additional file 3: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S3.Statistics of reads mapped back to the reference transcriptome. Total reads: the sequencing sequence has been filtered by the sequencing data (Clean data). Total mapped: the number of sequences that can be located on the genome; n general, if there is no pollution and the reference genome is appropriate, the percentage of this data is greater than 70%. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.6262361.v1
title: Additional file 3: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S3.Statistics of reads mapped back to the reference transcriptome. Total reads: the sequencing sequence has been filtered by the sequencing data (Clean data). Total mapped: the number of sequences that can be located on the genome; n general, if there is no pollution and the reference genome is appropriate, the percentage of this data is greater than 70%. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.6262412
title: Additional file 6: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S5. Metabolites enriched into twenty different metabolic pathways. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.6262412.v1
title: Additional file 6: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S5. Metabolites enriched into twenty different metabolic pathways. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.6262433
title: Additional file 7: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S6. Comprehensive networks of metabolites and transcripts, changed in common KEGG pathways and differentially expressed genes among these pathways. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.6262433.v1
title: Additional file 7: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S6. Comprehensive networks of metabolites and transcripts, changed in common KEGG pathways and differentially expressed genes among these pathways. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.6262445
title: Additional file 8: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S4. Entire data set for metabolite profiling from different treatment soybean roots. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.6262445.v1
title: Additional file 8: of Transcriptomic and metabolomic analyses reveal that bacteria promote plant defense during infection of soybean cyst nematode in soybean

description: Table S4. Entire data set for metabolite profiling from different treatment soybean roots. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.6262571
title: Additional file 3: of Intravenous injection of allogeneic umbilical cord-derived multipotent mesenchymal stromal cells reduces the infarct area and ameliorates cardiac function in a porcine model of acute myocardial infarction

description: Figure S2. Effects of intravenous injection of allogeneic UC-MSCs on cardiac structure and diastolic function after AMI. Left ventricular end-diastolic diameter (A), left ventricular end-systolic diameter (B), left ventricular end-diastolic volume (C), and left ventricular end-systolic volume (D). Intraventricular septal diastolic thickness (E), intraventricular septal systolic thickness (F), left ventricular posterior wall diastolic thickness (G), and left ventricular posterior wall systolic thickness (H). Left atrial diameter (I). Cardiac diastolic function: E/A ratio (J). Data are presented as the mean ± SD (PBS group n = 3, low-dose group n = 4, and high-dose group n = 4). *P &lt; 0.05 (ZIP 298 kb)
DOI: 10.6084/m9.figshare.6262571.v1
title: Additional file 3: of Intravenous injection of allogeneic umbilical cord-derived multipotent mesenchymal stromal cells reduces the infarct area and ameliorates cardiac function in a porcine model of acute myocardial infarction

description: Figure S2. Effects of intravenous injection of allogeneic UC-MSCs on cardiac structure and diastolic function after AMI. Left ventricular end-diastolic diameter (A), left ventricular end-systolic diameter (B), left ventricular end-diastolic volume (C), and left ventricular end-systolic volume (D). Intraventricular septal diastolic thickness (E), intraventricular septal systolic thickness (F), left ventricular posterior wall diastolic thickness (G), and left ventricular posterior wall systolic thickness (H). Left atrial diameter (I). Cardiac diastolic function: E/A ratio (J). Data are presented as the mean ± SD (PBS group n = 3, low-dose group n = 4, and high-dose group n = 4). *P &lt; 0.05 (ZIP 298 kb)
DOI: 10.6084/m9.figshare.6262616
title: Additional file 6: of Intravenous injection of allogeneic umbilical cord-derived multipotent mesenchymal stromal cells reduces the infarct area and ameliorates cardiac function in a porcine model of acute myocardial infarction

description: Figure S5. Intravenous injection of allogeneic UC-MSCs did not affect mRNA expression level of the inflammation factors TNF alpha, IL-6, IL-10, and TGF-beta in the infarct area (A,D,G,J), border area (B,E,H,K), or remote area (C,F,I,L) of LV myocardium at week 8 after AMI. (ZIP 248Â kb)
DOI: 10.6084/m9.figshare.6262616.v1
title: Additional file 6: of Intravenous injection of allogeneic umbilical cord-derived multipotent mesenchymal stromal cells reduces the infarct area and ameliorates cardiac function in a porcine model of acute myocardial infarction

description: Figure S5. Intravenous injection of allogeneic UC-MSCs did not affect mRNA expression level of the inflammation factors TNF alpha, IL-6, IL-10, and TGF-beta in the infarct area (A,D,G,J), border area (B,E,H,K), or remote area (C,F,I,L) of LV myocardium at week 8 after AMI. (ZIP 248Â kb)
DOI: 10.6084/m9.figshare.6265757
title: Supplementary Tables from Metabolic profiles of Cuibi-1 and Zhongyan-100 flue-cured tobacco leaves in different growing regions by gas chromatography/mass spectrometry

description: Supplemental Table 1. Qualitative compounds using commercial standards and databases; Supplemental table 2 Differential metabolites of tobacco samples beteween different cultivars and geographic origins.; Supplemental table 3 Correlation analysis between the identified differential metabolites.
DOI: 10.6084/m9.figshare.6265757.v1
title: Supplementary Tables from Metabolic profiles of Cuibi-1 and Zhongyan-100 flue-cured tobacco leaves in different growing regions by gas chromatography/mass spectrometry

description: Supplemental Table 1. Qualitative compounds using commercial standards and databases; Supplemental table 2 Differential metabolites of tobacco samples beteween different cultivars and geographic origins.; Supplemental table 3 Correlation analysis between the identified differential metabolites.
DOI: 10.6084/m9.figshare.6269177
title: Cotton Late Embryogenesis Abundant (LEA2) genes promote Root growth and Confers Drought Stress Tolerance in Transgenic Arabidopsis thaliana

description: <b>Supplementary Fig. S1</b>: Phylogenetic tree, gene
structure and motif compositions of <i>LEA2</i>
genes in upland cotton. The phylogenetic tree was constructed using MEGA 7.0.
Exon/intron structures of <i>LEA </i>genes
in upland cotton, exons introns and up/down-stream were represented by yellow
boxes, black lines and blue boxes, respectively. Protein motif analysis
represented by different colours, and each motif represented by number; <b>Supplementary Fig. S2</b>: conserved motifs
in upland cotton, <i>G. hirsutum</i> LEA2
proteins. The conserved motifs were obtained using MEME program. The color
scheme of the logo indicates amino acid types. Polar: green=uncharged;
blue=+vely charged; red=-vely charged; Non-polar: violet/purple=aliphatic. As
described by Dure, 2001; <b>Supplementary Fig.
S3</b>: Alignment of the LEA2 protein sequences of Upland cotton, <i>Gossypium hirsutum</i>. Amino acid sequences
were aligned using the ClustalW2 algorithm. Dashes indicate gaps introduced for
optimal alignment. The typical LEA2 sequence elements are bound in boxes in
different colours: K segment–red box; Y segment–green; S segment–black; E
segment–gray; R segment–purple; D segment–yellow; <b>Supplementary Fig. S4</b>. <i>LEA2 </i>genes
distribution in A and D cotton chromosomes: Chromosomal position of each <i>LEA</i>2 genes was mapped according to the upland cotton genome. The chromosome
number is indicated at the top of each chromosome; <b>Supplementary Fig. S5</b>: <i>LEA2</i>
genes distribution in upland cotton chromosomes. Chromosomal position of each<i> LEA</i>2 genes was mapped according to the upland cotton genome. The chromosome
number is indicated at the top of each chromosome; <b>Supplementary Table S1</b>: List of primers used for upland cotton, <i>G. hirsutum</i> <i>LEA2</i> genes expression analysis under drought stress; <b>Supplementary Table S2</b>: Conserved
domain analysis of LEA2s proteins identified from upland cotton using CDD tool
from NCBI; <b>Supplementary Table S3</b>:
Transmembrane domains in LEA2s identified from upland cotton, using TMHMM and
SOSUI servers. ExpAA: The expected number of amino acids in transmembrane
helices. First60: The expected number of amino acids in transmembrane helices
in the first 60 amino acids of the protein. MP: Membrane protein; TMH: The
number of predicted transmembrane helices; <b>Supplementary
Table S4</b>: Subcellular location as determined by TargetP and Pprowler
prediction tools. SP-secretory pathways; C-chloroplast;-any other location; <b>Supplementary Table S5</b>: Gene
duplication and determination of the Ks/Ka in paralogous gene pairs; <b>Supplementary</b> <b>Table S6</b>: Cis element analysis of putative LEA 2 promoters related
to drought stress and <b>Supplementary
Table S7</b>: <i>LEA2</i> genes and miRNA
targets
DOI: 10.6084/m9.figshare.6269177.v1
title: Cotton Late Embryogenesis Abundant (LEA2) genes promote Root growth and Confers Drought Stress Tolerance in Transgenic Arabidopsis thaliana

description: <b>Supplementary Fig. S1</b>: Phylogenetic tree, gene
structure and motif compositions of <i>LEA2</i>
genes in upland cotton. The phylogenetic tree was constructed using MEGA 7.0.
Exon/intron structures of <i>LEA </i>genes
in upland cotton, exons introns and up/down-stream were represented by yellow
boxes, black lines and blue boxes, respectively. Protein motif analysis
represented by different colours, and each motif represented by number; <b>Supplementary Fig. S2</b>: conserved motifs
in upland cotton, <i>G. hirsutum</i> LEA2
proteins. The conserved motifs were obtained using MEME program. The color
scheme of the logo indicates amino acid types. Polar: green=uncharged;
blue=+vely charged; red=-vely charged; Non-polar: violet/purple=aliphatic. As
described by Dure, 2001; <b>Supplementary Fig.
S3</b>: Alignment of the LEA2 protein sequences of Upland cotton, <i>Gossypium hirsutum</i>. Amino acid sequences
were aligned using the ClustalW2 algorithm. Dashes indicate gaps introduced for
optimal alignment. The typical LEA2 sequence elements are bound in boxes in
different colours: K segment–red box; Y segment–green; S segment–black; E
segment–gray; R segment–purple; D segment–yellow; <b>Supplementary Fig. S4</b>. <i>LEA2 </i>genes
distribution in A and D cotton chromosomes: Chromosomal position of each <i>LEA</i>2 genes was mapped according to the upland cotton genome. The chromosome
number is indicated at the top of each chromosome; <b>Supplementary Fig. S5</b>: <i>LEA2</i>
genes distribution in upland cotton chromosomes. Chromosomal position of each<i> LEA</i>2 genes was mapped according to the upland cotton genome. The chromosome
number is indicated at the top of each chromosome; <b>Supplementary Table S1</b>: List of primers used for upland cotton, <i>G. hirsutum</i> <i>LEA2</i> genes expression analysis under drought stress; <b>Supplementary Table S2</b>: Conserved
domain analysis of LEA2s proteins identified from upland cotton using CDD tool
from NCBI; <b>Supplementary Table S3</b>:
Transmembrane domains in LEA2s identified from upland cotton, using TMHMM and
SOSUI servers. ExpAA: The expected number of amino acids in transmembrane
helices. First60: The expected number of amino acids in transmembrane helices
in the first 60 amino acids of the protein. MP: Membrane protein; TMH: The
number of predicted transmembrane helices; <b>Supplementary
Table S4</b>: Subcellular location as determined by TargetP and Pprowler
prediction tools. SP-secretory pathways; C-chloroplast;-any other location; <b>Supplementary Table S5</b>: Gene
duplication and determination of the Ks/Ka in paralogous gene pairs; <b>Supplementary</b> <b>Table S6</b>: Cis element analysis of putative LEA 2 promoters related
to drought stress and <b>Supplementary
Table S7</b>: <i>LEA2</i> genes and miRNA
targets