cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.47u8km
title: Occurrence Download

description: A dataset containing 400 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glebionis coronaria (Linnaeus, 1753) Cass"
 ]
}

 The dataset includes 400 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008415-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.74ucdg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amaranthus viridis Pollich"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008416-250127130748423/datasets/export for details.
DOI: 10.15468/dl.u5d8hy
title: Occurrence Download

description: A dataset containing 95101 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum lycopersicum L."
 ]
}

 The dataset includes 95101 records from 652 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008413-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evkhqc
title: Occurrence Download

description: A dataset containing 11754 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glebionis coronaria (L.) Cass. ex Spach"
 ]
}

 The dataset includes 11754 records from 192 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008417-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jx96eh
title: Occurrence Download

description: A dataset containing 564284 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Convolvulus arvensis L."
 ]
}

 The dataset includes 564284 records from 3528 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008405-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/i1fpjj
title: CTD water column metabarcoding

description: Water column metabarcoding of 16S rRNA from South Atlantic
DOI: 10.5281/zenodo.15869668
title: National Temperature Neutrality, Agricultural Methane and Climate Policy: Reinforcing Inequality in the Global Food System

description: This dataset underpins the analysis in "National Temperature Neutrality, Agricultural Methane and Climate Policy: Reinforcing Inequality in the Global Food System." It includes Ireland’s GHG emissions scenarios, modeled temperature contributions, and supporting agri-food and trade data. The files enable full reproducibility of results and figures in the manuscript, including all scenario, trade, and land use change calculations.
DOI: 10.5281/zenodo.15869669
title: National Temperature Neutrality, Agricultural Methane and Climate Policy: Reinforcing Inequality in the Global Food System

description: This dataset underpins the analysis in "National Temperature Neutrality, Agricultural Methane and Climate Policy: Reinforcing Inequality in the Global Food System." It includes Ireland’s GHG emissions scenarios, modeled temperature contributions, and supporting agri-food and trade data. The files enable full reproducibility of results and figures in the manuscript, including all scenario, trade, and land use change calculations.
DOI: 10.15468/x8zn26
title: MiSeq 16S rRNA gene (archaeal 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer

description: DNA from 33 Mai Po sediments have been extracted and amplified by 21f/958r & Arch347F/Arch806R primer pairs (for archaeal 16S rRNA gene). The archaeal communities of these 33 samples were obtained.
DOI: 10.57745/adcelx
title: CAPRIV_Orchards.tab

description: Main table for Drift Data for Orchards (CAPRIV project). Raw weather data currently under revision will be added. Data paper to be submitted. See other files in the dataset with Orchards in file name
DOI: 10.57745/0tclad
title: SAMC_Orchards_CAPRIV.tab

description: Secondary table (SAMC) for Drift Data for Orchards (CAPRIV project)
DOI: 10.57745/gu6bww
title: SAMC_FieldCrops_CAPRIV.tab

description: Secondary table (SAMC) for Drift Data for Field Crops (CAPRIV project)
DOI: 10.57745/ihuzad
title: SAMC_Viti_CAPRIV.tab

description: Secondary table (SAMC) for Drift Data for Viticulture (CAPRIV project)
DOI: 10.57745/1dksso
title: units_samctables.tab

description: Description of columns and units of all SAMC tables (Field Crops, Orchards, Viticulture): they share a common format
DOI: 10.57745/sewzhj
title: units_maintables.tab

description: Description of columns and units of all main tables (Field Crops, Orchards, Viticulture): they share a common format
DOI: 10.15468/v3el6r
title: nifH diversity in the North Pacific Ocean

description: This study was performed to elucidate community structure of nitrogen fixing bacteria in the North Pacific Ocean
DOI: 10.57745/gpluuq
title: CAPRIV_project.pdf

description: This document provides a short description of the CAPRIV project and of the data contents
DOI: 10.57745/vyqurs
title: CAPRIV_analyses.pdf

description: This document provides an overview of methodes used in CAPRIV project to analyse samples
DOI: 10.57745/ll3t9a
title: capriv.py

description: sample script in Python language to read the data
DOI: 10.57745/c6uvnz
title: CAPRIV_fieldcrops_weather_rawdata.zip

description: Raw data of wind for each trial
DOI: 10.57745/gbtt4j
title: CAPRIV_FieldCrops.tab

description: Main table for Drift Data for Field Crops (CAPRIV project). A Data paper has been accepted (DOI:10.1016/j.dib.2024.110366) that describes the experiments and the data. See also other files in the dataset with FieldCrops in file name.
DOI: 10.57745/fg5sfq
title: CAPRIV_fieldcrops_weather_doc.pdf

description: Documentation on raw data about weather for trials in field crops and on computation of synthetic weather indicators that are available in the main table for field crops: CAPRIV_FieldCrops
DOI: 10.57745/vzcvyx
title: CAPRIV_Viti.tab

description: Main table for Drift Data for Viticulture (CAPRIV project). A Data paper has been accepted (DOI:10.1016/j.dib.2024.110819). See other files in the dataset with Viti in file name.
DOI: 10.57745/g8txwy
title: CAPRIV_viti_weather_rawdata.zip

description: Raw data of wind, temperature and hygrometry, for each trial
DOI: 10.57745/irjyu8
title: CAPRIV_weather_viticulture_doc.pdf

description: Documentation on raw data about weather for trials in viticulture and on computation of synthetic weather indicators that are available in the main table for viticulture: CAPRIV_Viti
DOI: 10.57745/ttu5ta
title: CAPRIV_Orchards.tab

description: Main table for Drift Data for Orchards (CAPRIV project). Data paper to be submitted. See other files in the dataset with Orchards in file name.
DOI: 10.57745/3ttb6d
title: CAPRIV_orchards_weather_rawdata.zip

description: Zipped raw data of wind, temperature and hygrometry, for each trial and two complementary files
DOI: 10.57745/kwudcu
title: CAPRIV_weather_orchards_doc.pdf

description: Documentation on raw data about weather for trials in orchards and on computation of synthetic weather indicators that are available in the main table for orchard: CAPRIV_Orchards
DOI: 10.57745/5qlskq
title: units_samctables.tab

description: Description of columns and units of all SAMC tables (Field Crops, Orchards, Viticulture): they share a common format.
DOI: 10.57745/z8oj3a
title: Drift data from French CAPRIV project

description: Drift from sprayers and influence of drift mitigation technologies and methods: data from the French CAPRIV project for 3 agricultural production sectors: field crops, orchards, viticulture
DOI: 10.15468/cc7dbe
title: AT26-10 Crab Spa IGT incubations raw sequence reads

description: These are sequences from the final time point of ~24 h incubations of diffuse-flow hydrothermal vent fluids from "Crab Spa" (9o50.3981 N, 104o17.4942 W). All but two samples were incubated at 24 C, the remaining two were incubated at 50 C. Further details about sampling and experimental conditions are available in an accepted publication by McNichol et al (2016) entitled "Assessing Microbial Processes in Deep-Sea Hydrothermal Systems via Incubations at In Situ Temperature and Pressure" to be published in Deep-Sea Research Part I. A forthcoming publication will also use these data.
DOI: 10.15468/yg0uin
title: Life in a toxic environment

description: Monitoring of microbial groups along redox gradients in different marine environments.
DOI: 10.15468/dl.wkcf9t
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Medicago tornata",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011506-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vxp3tk
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Allium senescens glaucum)"
 ]
}

 The dataset includes 89 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011508-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17140298
title: Organisational stakeholders identified for mainstreaming nature-based solutions across European economic sectors

description: Organisational stakeholders identified for mainstreaming nature-based solutions across European economic sectors.
DOI: 10.15468/1gos8d
title: Marine Bacteria 16S V4 Raw sequence reads

description: Analysis of Bacterioplankton Community Distribution Pattern in Bohai Bay
DOI: 10.15468/dl.vpara6
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (France, unknown or invalid)",
 "OccurrenceStatus is Present",
 "TaxonKey is Muntiacus reevesi"
 ]
}

 The dataset includes 21 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011510-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/tqq2pn
title: sediment metagenome Raw sequence reads

description: It was used to reflect the microbial community diversity for the sediment samples collected from the Yellow River Estuary.
DOI: 10.15468/dl.5ps8vd
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Medicago tornata",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011507-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/rouw0w
title: Abundance, diversity and distribution of Legionellales in wet environments in Sweden

description: In this study, 57 samples from water, soil and sediments were collected in different wet environments in Uppland, Sweden. 45 of them were taken from natural reserves, and 12 from a silver mine. The main objective was to study the abundance, diversity and distribution of members of the gammaproteobacterial order Legionellales.
DOI: 10.5281/zenodo.17191240
title: TranscriptomicData associated to publication https://doi.org/10.3390/agronomy15061479

description: Transcriptomic Data associated to publication https://doi.org/10.3390/agronomy15061479

Table S1: Summary statistics of V. sativa (a) and P. sativum (b) transcriptome sequencing (Trimming Data Stats)

Table S2: Statistics of clustered contigs (unigenes) and ORF prediction in V.sativa transcriptome sequencing 

Table S3: Annotation result of various databases for V.sativa  transcriptomic data    

Table S4. Gene-specific primers used for quantitative real-time PCR assays
DOI: 10.5281/zenodo.17191241
title: TranscriptomicData associated to publication https://doi.org/10.3390/agronomy15061479

description: Transcriptomic Data associated to publication https://doi.org/10.3390/agronomy15061479

Table S1: Summary statistics of V. sativa (a) and P. sativum (b) transcriptome sequencing (Trimming Data Stats)

Table S2: Statistics of clustered contigs (unigenes) and ORF prediction in V.sativa transcriptome sequencing 

Table S3: Annotation result of various databases for V.sativa  transcriptomic data    

Table S4. Gene-specific primers used for quantitative real-time PCR assays
DOI: 10.15468/t32q8r
title: Microbial community structure of sediment microbiome in the pelagic zone of Gulf of Kutch, Gujarat, India.

description: The pelagic sediment microbiota was assessed in the three sections of the sampled core (1m) from four locations of the Gulf of Kutch.
DOI: 10.15468/hqedjb
title: A metagenetic approach for revealing community structure of marine planktonic copepods

description: Marine planktonic copepods are an ecologically important group with high species richness and abundance. Here, we propose a new metagenetic approach for revealing the community structure of marine planktonic copepods using 454 pyrosequencing of nuclear large subunit ribosomal DNA. We developed a method for clustering pyrosequencing data into molecular operational taxonomic units (MOTUs) through analysis of an artificial copepod community containing 33 morphologically identified species. The 99% similarity threshold had high species-level resolution for MOTU clustering but overestimated species richness. The artificial community was appropriately clustered into MOTUs at 97% similarity, with little inflation in MOTU numbers and with relatively high species-level resolution. The number of sequence reads per MOTU was correlated with dry weight of that taxon, suggesting that sequence reads could be used as a proxy for biomass. Next, we applied the method to field-collected samples, and the results corresponded reasonably well with morphological analysis of these communities. Numbers of MOTUs were well correlated with species richness at 97% similarity, and large numbers of sequence reads were generally observed in MOTUs derived from species with large biomass. MOTUs were successfully classified at the family level at 97% similarity; similar patterns of species richness and biomass within families were revealed with metagenetic and morphological analyses. At the 99% similarity threshold, MOTUs with high proportions of sequence reads were identified as biomass-dominant species in each field-collected sample. The metagenetic approach reported here can be an effective tool for rapid and comprehensive assessment of copepod community structure.
DOI: 10.5281/zenodo.17135974
title: Longitudinal Dataset – HAPA Smoking Cessation Scale (T0–T1) in Head and Neck Cancer Patients

description: README – Dataset Description

This dataset accompanies the manuscript entitled "From Diagnosis to Behavior Change: Predictive Value of the HAPA Model on Smoking Cessation in Head and Neck Cancer Patients."It includes longitudinal data from participants recently diagnosed with head and neck cancer (ORL) who completed a set of self-report questionnaires at baseline (T0) and were followed up one month later (T1) to assess smoking status and dependence.

The dataset is provided in Excel format (.xlsx) and is organized as follows:

·        Columns A to G: Sociodemographic and clinical information – gender, age, marital status, socio-professional status, cancer diagnosis, cancer treatment, and tumor stage.

·        Columns H to S: Responses to the 12 items of the Cigarette Dependence Scale (CDS) at baseline (T0).

·        Columns T to AE: Responses to the 12 items of the Thoughts about Smoking Questionnaire (TCQ) at baseline (T0).

·        Columns AF to BF: Responses to the 27 items of the HAPA-based scale adapted to tobacco use, including risk perception (RP1–RP4), outcome expectancies (OE1–OE4), action self-efficacy (ASE1–ASE4), maintenance self-efficacy (MSE1–MSE4), recovery self-efficacy (RSE1–RSE3), behavioral intention (BI1–BI3), action planning (AP1–AP2), and coping planning (CP1–CP3).

·        Column BG: Smoking cessation status at one-month follow-up (T1) – binary outcome (0 = still smoking, 1 = abstinent).

·        Columns BH to BS: Responses to the 12 items of the Cigarette Dependence Scale (CDS) at T1.

A codebook describing the coding of categorical variables, item labels, and response formats is provided in the second sheet of the Excel file.
DOI: 10.5281/zenodo.17135975
title: Longitudinal Dataset – HAPA Smoking Cessation Scale (T0–T1) in Head and Neck Cancer Patients

description: README – Dataset Description

This dataset accompanies the manuscript entitled "From Diagnosis to Behavior Change: Predictive Value of the HAPA Model on Smoking Cessation in Head and Neck Cancer Patients."It includes longitudinal data from participants recently diagnosed with head and neck cancer (ORL) who completed a set of self-report questionnaires at baseline (T0) and were followed up one month later (T1) to assess smoking status and dependence.

The dataset is provided in Excel format (.xlsx) and is organized as follows:

·        Columns A to G: Sociodemographic and clinical information – gender, age, marital status, socio-professional status, cancer diagnosis, cancer treatment, and tumor stage.

·        Columns H to S: Responses to the 12 items of the Cigarette Dependence Scale (CDS) at baseline (T0).

·        Columns T to AE: Responses to the 12 items of the Thoughts about Smoking Questionnaire (TCQ) at baseline (T0).

·        Columns AF to BF: Responses to the 27 items of the HAPA-based scale adapted to tobacco use, including risk perception (RP1–RP4), outcome expectancies (OE1–OE4), action self-efficacy (ASE1–ASE4), maintenance self-efficacy (MSE1–MSE4), recovery self-efficacy (RSE1–RSE3), behavioral intention (BI1–BI3), action planning (AP1–AP2), and coping planning (CP1–CP3).

·        Column BG: Smoking cessation status at one-month follow-up (T1) – binary outcome (0 = still smoking, 1 = abstinent).

·        Columns BH to BS: Responses to the 12 items of the Cigarette Dependence Scale (CDS) at T1.

A codebook describing the coding of categorical variables, item labels, and response formats is provided in the second sheet of the Excel file.
DOI: 10.15468/jsjpdt
title: 16S rRNA sequences of bacterioplankton spatial distributions in the Baltic Proper

description: The overall goal of this spatial sampling of marine bacterioplankton was to observe the distribution of populations from coastal to offshore. In relation to bacterial production and primary production such information is relevant for investigating coastal to offshore food web efficiency and the role of bacterioplankton community composition in food web dynamics.
DOI: 10.15468/dl.6dakk5
title: Occurrence Download

description: A dataset containing 112261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amandava amandava)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 112261 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011464-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/e3itrl
title: Picocyanobacterial diversity in spring in the East China Sea and the East Sea (Targeted loci environmental)

description: To understand a distribution pattern of picocyanobacterial diversity during spring season in seas around Korean peninsula, their genetic diversity were studied using barcoded amplicon sequencing approaches in the East Sea and the East China Sea.
DOI: 10.13131/2jje-r163
title: Il fenomeno della cristianizzazione rurale negli Erei meridionali (fine IVIX sec. d.C.): dati archeologici dalle indagini di superficie nei territori di Enna e Piazza Armerina (EN, Sicilia)
DOI: 10.15468/hw9eqg
title: Arctic Microbial response to oil and Corexit

description: The fate of oil and oil spill response chemicals in the Arctic is of critical importance as marine shipping and oil exploration are increasing due to receding sea ice cover. Using indigenous Arctic marine organisms in freshly collected seawater, we identified of bacterial taxa that increase in relative abundance in response to both oil and Corexit in Arctic seawater, suggesting that some taxa biodegrade components of both oil and dispersant. We then paried these microbial analyses with the chemical loss of oil and the surfactant components of Corexit 9500. These results allow for the first comparison between Arctic and temperate environments in regards to the fate of Corexit and the microbes involved in biodegrading dispersants and oil.
DOI: 10.15468/yyd7cm
title: Picoplankton 16S rRNA gene sequences (DNA and RNA) from Vertical Profiles (surface to 4000m depth) sampled during the Malaspina 2010 circumglobal expedition

description: The study here includes 182 samples (91 DNA and 91 RNA) of the 16S from the Malaspina-2010 expedition. The samples were sequenced using Illumina MiSeq 2x250bp.
DOI: 10.15468/dl.4brafe
title: Occurrence Download

description: A dataset containing 546 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Allium sikkimense)"
 ]
}

 The dataset includes 546 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011513-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.