cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.w979aa
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Muscari hierosolymitanum Ravenna"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058145-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmz5ec
title: Occurrence Download

description: A dataset containing 196 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monactinocephalus paniculatus Klatt"
 ]
}

 The dataset includes 196 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058146-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.554emu
title: Occurrence Download

description: A dataset containing 552 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontarrhena corsica (Duby) Španiel, Al-Shehbaz, D.A.German & Marhold"
 ]
}

 The dataset includes 552 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058147-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sh7e2c
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Muscari inconstrictum Rech.f."
 ]
}

 The dataset includes 103 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058148-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3eqs78
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monactinocephalus shirensis (Oliv.) D.Gut.Larr., Santos-Vicente, Anderb., E.Rico & M.M.Mart.Ort."
 ]
}

 The dataset includes 143 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058149-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hw5cph
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontarrhena corymbosoidea (Formánek) Španiel, Al-Shehbaz, D.A.German & Marhold"
 ]
}

 The dataset includes 63 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058150-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sdpfnm
title: Occurrence Download

description: A dataset containing 2764276 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Venezuela (Bolivarian Republic of)",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 2764276 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058088-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.du9ktg
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Muscari kerkis Karlén"
 ]
}

 The dataset includes 11 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058151-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pb84uv
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Seriola lalandi Valenciennes, 1833",
 "Year 2000-2024"
 ]
}

 The dataset includes 111 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058152-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rsdame
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Seriola lalandi Valenciennes, 1833",
 "Year 2000-2024"
 ]
}

 The dataset includes 111 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058153-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7bf7n
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monanthes anagensis Praeger"
 ]
}

 The dataset includes 69 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058154-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pdv7d9
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontarrhena crenulata (Boiss. & Heldr.) Španiel, Al-Shehbaz, D.A.German & Marhold"
 ]
}

 The dataset includes 27 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058155-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nenrp7
title: Occurrence Download

description: A dataset containing 761 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Muscari latifolium J.Kirk"
 ]
}

 The dataset includes 761 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058156-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvcdjf
title: Occurrence Download

description: A dataset containing 178 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monanthes atlantica Ball"
 ]
}

 The dataset includes 178 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058157-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ypb8x3
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontarrhena cyprica (Nyár.) Španiel, Al-Shehbaz, D.A.German & Marhold"
 ]
}

 The dataset includes 81 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058158-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.spbudh
title: Occurrence Download

description: A dataset containing 204 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Muscari longipes Boiss."
 ]
}

 The dataset includes 204 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058160-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fvyfbd
title: Occurrence Download

description: A dataset containing 309 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monanthes brachycaulos (Webb & Berth) Lowe"
 ]
}

 The dataset includes 309 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058161-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.627yqn
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontarrhena davisiana (T.R.Dudley) Španiel, Al-Shehbaz, D.A.German & Marhold"
 ]
}

 The dataset includes 11 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058163-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zbbwpv
title: Occurrence Download

description: A dataset containing 46339 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nereocystis Postels & Ruprecht, 1840"
 ]
}

 The dataset includes 46339 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058159-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hbj2kg
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neoarytera nekorensis (H.Turner) Callm., Buerki, Munzinger & Lowry"
 ]
}

 The dataset includes 25 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058162-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mdewvm
title: Occurrence Download

description: A dataset containing 2258794 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-47.68081 -25.26282,-45.84619 -25.13001,-41.07616 -22.78303,-38.65445 -18.66598,-38.28752 -12.37654,-45.62603 -11.87431,-51.05653 -11.73064,-55.09271 -12.16141,-58.24826 -16.35668,-58.5418 -21.90065,-54.79917 -23.72694,-47.68081 -25.26282))",
 "HasGeospatialIssue is false",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 2258794 records from 483 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057831-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.1192924.v1
title: Woodlot Dataset 3

description: Method: Group members: Afra, Maham, Farinaz and Sana The purpose of this experiment with respect to Woodlot dataset 3 is to become familiar with sampling tools such as the transect tape and learning techniques for collecting field data such as distance between trees, circumference of trees and subsequently the diameter at breast height and determining tree condition. This data could be used to determine tree conditions near the edge of the woodlot in comparison to the centre of the woodlot. I predict that trees found on the edge of the woodlot receive more sunlight than those found in centre of the woodlot. Thus, I hypothesize that the adult trees near the edge of the woodlot would possess healthier and non decaying bark and a large canopy (abundant leaves) whereas adult trees located closer to the centre of the woodlot would possess decaying bark and a smaller canopy. Data collection for Woodlot dataset 3 took place at the Northwest corner of York University's Keele campus in a Woodlot on September 26, 2014 from 3:00pm to 4:00pm by Sana Jamal and Maham Anees. Sana both recorded and took measurements while, Maham solely took the measurements. At the time of data collection, it was sunny with very little cloud cover and wind. The temperature at this time was about 23 degrees Celsius. The transect tape was placed on the ground at the edge of the woodlot and extended approximately 30 meters in a straight line to centre of the woodlot. One adult tree was selected at random from the edge of the woodlot and subsequent adult trees were selected along the transect tape placed on the ground. Overall, 10 pairs of adult trees were selected giving a total of 20 trees. The distance between a pair of adult trees was measured in centimeter using a transect tape where each distance measurement was taken from the base of each tree. The diameter at breast height (dbh) of each tree was determine by measuring the circumference of each adult tree in centimeter using a transect tape and applying the formula, diameter= circumference/ π. Lastly, the condition of the tree was determined by visually observing the tree with the eyes. The condition of the tree was based on a scale where, 0 = dead , 1 = living, 2 = huge green canopy.
DOI: 10.6084/m9.figshare.1192875
title: New technologies & approaches for citizen science @scotbio14

description: Workshop intro that I should have given at the Biodiversity Science Conference hosted by the RBGE
DOI: 10.6084/m9.figshare.1192875.v1
title: New technologies & approaches for citizen science @scotbio14

description: Workshop intro that I should have given at the Biodiversity Science Conference hosted by the RBGE
DOI: 10.6084/m9.figshare.1192874
title: Data generated in an experiment on the impact of pH on survival and settlement of dreissenid mussels

description: This are the raw data produced in the experiment by Claudi et al. (2012), who used Lake Ontario water in a continuous flow through system to determine the impact of low pH on dreissenid mussel (zebra mussel, Dreissena polymorpha Pallas, 1771, and quagga mussel, Dreissena rostriformis<br>bugensis Andrusov, 1897) settlement and survival in calcium rich waters (see link to the original paper). <em>Claudi et al. (2012) Impact of pH on survival and settlement of dreissenid mussels. Aquatic Invasions 7(1): 21-28 </em>
DOI: 10.6084/m9.figshare.1192860
title: JSS Web API Data

description: Web API data for JSS paper.
DOI: 10.6084/m9.figshare.1192860.v1
title: JSS Web API Data

description: Web API data for JSS paper.
DOI: 10.6084/m9.figshare.1192874.v2
title: Data generated in an experiment on the impact of pH on survival and settlement of dreissenid mussels

description: This are the raw data produced in the experiment by Claudi et al. (2012), who used Lake Ontario water in a continuous flow through system to determine the impact of low pH on dreissenid mussel (zebra mussel, Dreissena polymorpha Pallas, 1771, and quagga mussel, Dreissena rostriformis<br>bugensis Andrusov, 1897) settlement and survival in calcium rich waters (see link to the original paper). <em>Claudi et al. (2012) Impact of pH on survival and settlement of dreissenid mussels. Aquatic Invasions 7(1): 21-28 </em>
DOI: 10.6084/m9.figshare.1192874.v1
title: Impact of pH on survival and settlement of dreissenid mussels

description: This are the raw data produced in the experiment by Claudi et al. (2012), who used Lake Ontario water in a continuous flow through system to determine the impact of low pH on dreissenid mussel (zebra mussel, Dreissena polymorpha Pallas, 1771, and quagga mussel, Dreissena rostriformis<br>bugensis Andrusov, 1897) settlement and survival in calcium rich waters (see link to the original paper). <em>Claudi et al. (2012) Impact of pH on survival and settlement of dreissenid mussels. Aquatic Invasions 7(1): 21-28 </em>
DOI: 10.6084/m9.figshare.1192705
title: Variation in crossover frequencies perturb crossover assurance without affecting meiotic chromosome segregation in Saccharomyces cerevisiae.

description: <strong>"Variation in crossover frequencies perturb crossover assurance without affecting meiotic chromosome segregation in <em>Saccharomyces cerevisiae</em>"</strong> - This work has been published in Genetics journal. We have deposited all the processed files generated by analysing Whole Genome Sequencing data from 80 yeast tetrads in the S288c/YJM789 background (20 wild type, 38 <em>msh4-R676W</em>, 18 <em>msh4</em>-null, and 4 WT SK1 MSH4/5). Recombination analysis was carried out using ReCombine software, and the output files generated are included in this deposit. We have also uploaded an in house R script written to process the ReCombine output files into images used in the manuscript. citation: Krishnaprasad GN, Anand MT, Lin G, Tekkedil MM, Steinmetz LM, Nishant KT. Variation in Crossover Frequencies Perturb Crossover Assurance Without Affecting Meiotic Chromosome Segregation in Saccharomyces cerevisiae. Genetics 2015;199(2):399-412. doi:10.1534/genetics.114.172320. PubMed: http://www.ncbi.nlm.nih.gov/pubmed/25467183 Genetics: http://www.genetics.org/content/199/2/399.long
DOI: 10.6084/m9.figshare.1192705.v2
title: Variation in crossover frequencies perturb crossover assurance without affecting meiotic chromosome segregation in Saccharomyces cerevisiae.

description: The manuscript <strong>"Variation in crossover frequencies perturb crossover assurance without affecting meiotic chromosome segregation in <em>Saccharomyces cerevisiae</em>"</strong> has been submitted to Genetics journal. We have deposited all the processed files generated by analysing Whole Genome Sequencing data from 80 yeast tetrads in the S288c/YJM789 background (20 wild type, 38 <em>msh4-R676W</em>, 18 <em>msh4</em>-null, and 4 WT SK1 MSH4/5). Recombination analysis was carried out using ReCombine software, and the output files generated are included in this deposit. We have also uploaded an in house R script written to process the ReCombine output files into images used in the manuscript.
DOI: 10.6084/m9.figshare.1192659
title: SyntenyMapper - 25 species pairs

description: This data represents SyntenyMapper results for 25 species pairs, including input data from ENSEMBL Compara, SyntenyMapper output and, for some species, visualization. SyntenyMapper is a tool for highly accurate detection of micro-rearranged regions within macro-rearranged synteny regions. For each species pair, four files are present:<br>species1-species2-orthologs-v73.filtered: ENSEMBL Compara orthology relationships for protein-coding genes species1-species2-synteny-v73: ENSEMBL Compara synteny regions species1-species2-output_synteny-v73: SyntenyMapper output, refined synteny regions including micro-rearrangements species1-species2-output_mapping-v73: SyntenyMapper output, one-to-one mapping of orthologous genes, including reference to refined synteny regions (optional) species1-species2-visualization.tar: SyntenyMapper visualization of all synteny regions for the species pair, as html files with clickable gene labels and png files. All ENSEMBL data is downloaded from version 73.
DOI: 10.6084/m9.figshare.1192659.v1
title: SyntenyMapper - 25 species pairs

description: This data represents SyntenyMapper results for 25 species pairs, including input data from ENSEMBL Compara, SyntenyMapper output and, for some species, visualization. SyntenyMapper is a tool for highly accurate detection of micro-rearranged regions within macro-rearranged synteny regions. For each species pair, four files are present:<br>species1-species2-orthologs-v73.filtered: ENSEMBL Compara orthology relationships for protein-coding genes species1-species2-synteny-v73: ENSEMBL Compara synteny regions species1-species2-output_synteny-v73: SyntenyMapper output, refined synteny regions including micro-rearrangements species1-species2-output_mapping-v73: SyntenyMapper output, one-to-one mapping of orthologous genes, including reference to refined synteny regions (optional) species1-species2-visualization.tar: SyntenyMapper visualization of all synteny regions for the species pair, as html files with clickable gene labels and png files. All ENSEMBL data is downloaded from version 73.
DOI: 10.6084/m9.figshare.1192705.v3
title: Variation in crossover frequencies perturb crossover assurance without affecting meiotic chromosome segregation in Saccharomyces cerevisiae.

description: The manuscript <strong>"Variation in crossover frequencies perturb crossover assurance without affecting meiotic chromosome segregation in <em>Saccharomyces cerevisiae</em>"</strong> has been submitted to Genetics journal. We have deposited all the processed files generated by analysing Whole Genome Sequencing data from 80 yeast tetrads in the S288c/YJM789 background (20 wild type, 38 <em>msh4-R676W</em>, 18 <em>msh4</em>-null, and 4 WT SK1 MSH4/5). Recombination analysis was carried out using ReCombine software, and the output files generated are included in this deposit. We have also uploaded an in house R script written to process the ReCombine output files into images used in the manuscript.
DOI: 10.6084/m9.figshare.1192460.v1
title: Origin of the balanomorph barnacles (Crustacea, Cirripedia, Thoracica): new evidence from the Late Cretaceous (Campanian) of Sweden

description: New material of thoracican cirripedes, traditionally assigned to Brachylepadomorpha and basal Balanomorpha, is described from abundant isolated plates collected from sediment deposited between boulders on a rocky coastline of Late Campanian age (<i>c</i>. 80 Ma) at Ivö Klack in Scania, southern Sweden. Two new genera, <i>Epibrachylepas</i> Gale gen. nov. and <i>Parabrachylepas</i> Gale gen. nov. (type species <i>P. ifoensis</i> Withers, 1935) are described, as is a new species, <i>Epibrachylepas newmani</i> Gale sp. nov<i>. Pachydiadema cretacea</i> Withers, 1935 and <i>Brachylepas guascoi</i> (Bosquet, 1857) are redescribed on the basis of extensive new material. It is concluded that the long-held homologies between lateral plates of pedunculate cirripedes and balanomorphs are incorrect, and a new nomenclature is proposed for the latter group. Cladistic analysis based on 40 morphological characters of 12 species yields a consensus tree showing successive <i>Brachylepas</i> species and <i>Pachydiadema</i> as sister taxa to the crown group balanomorphs, which are here called Neobalanomorpha Gale suborder nov. Both ‘Brachylepadomorpha’ and ‘Brachylepadidae’ are paraphyletic, and together with <i>P. cretacea</i> form a morphocline leading from pedunculate ancestors (<i>Pycnolepas articulata</i>), through to basal sessile forms (<i>B. naissanti</i>, <i>B. guascoi</i>) and on to taxa identified as basal balanomorphs (<i>Parabrachylepas</i>, <i>Epibrachylepas</i>, <i>Pachydiadema</i>). The functional significance of the progressive changes is discussed with reference to living taxa. It is suggested that the radiation of Neobalanomorpha, dominant shallow water thoracicans in the Cenozoic, postdated the K-Pg near-extinction of more basal sessile barnacle groups.http://zoobank.org/urn:lsid:zoobank.org:pub:BB41A405-C0AE-472D-AD09-77D39C6A32FC