cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/m2n8h6gdcf.1
title: Data for: In-Kind Contributions to Orange County Marine Protected Area Management

description: The two Excel databases include the data, provided by OCMPAC members, describing their in-kind contributions to MPA management. There is one Excel workbook for each of the study years (2013-2014 and 2014-2015). Data have been scrubbed to protect the anonymity of OCMPAC members; we removed organizations' and individuals' names from the database and revised the qualitative descriptions of contributions as needed to remove identifying information.
DOI: 10.15468/dl.pwm7ez
title: Occurrence Download

description: A dataset containing 1305991 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acer argutum Maxim. ex Miq., Acer buergerianum Miq., Acer campbellii Hook.fil. & Thomson, Acer campestre L., Acer capillipes Maxim. ex Miq., Acer carpinifolium Siebold & Zucc., Acer cissifolium (Siebold & Zucc.) C.Koch, Acer cordatum Pax, Acer crataegifolium Siebold & Zucc., Acer davidii Franch., Acer diabolicum Blume ex Koch, Acer distylum Siebold & Zucc., Acer fabri Hance, Acer garrettii Craib, Acer japonicum C.P.Thunberg ex A.Murray, Acer laurinum Hassk., Acer micranthum Siebold & Zucc., Acer miyabei Maxim., Acer monspessulanum L., Acer morifolium Koidz., Acer negundo L., Acer nipponicum H.Hara, Acer oblongum Wall. ex DC., Acer olivaceum W.P.Fang & P.L.Chiu, Acer opalus Mill., Acer palmatum Thunb. ex Murr., Acer pectinatum Wall., Acer pictum Thunb. ex Murray, Acer pilosum Maxim., Acer platanoides L., Acer pseudoplatanus L., Acer pseudosieboldianum (Pax) Kom., Acer pycnanthum C.Koch, Acer rubrum L., Acer rufinerve Siebold & Zucc., Acer saccharinum L., Acer saccharum Marshall, Acer shirasawanum Koidz., Acer sieboldianum Miq., Acer spicatum Lam., Acer tataricum L., Acer truncatum Bunge, Acer tschonoskii Maxim., Acer tutcheri Duthie, Dipteronia sinensis Oliv., Acer acuminatum Wall. ex D.Don, Acer barbinerve Maxim. ex Miq., Acer caesium Wall. ex Brandis, Acer calcaratum Gagnep., Acer caudatifolium Hayata, Acer caudatum Wall., Acer circinatum Pursh, Acer erianthum Schwer., Acer erythranthum Gagnep., Acer glabrum Torr., Acer grandidentatum Nutt. ex Torr. & A.Gray, Acer griseum (Franch.) Pax, Acer heldreichii Orph., Acer henryi Pax, Acer komarovii Pojark., Acer laevigatum Wall., Acer linganense W.P.Fang & P.L.Chiu, Acer macrophyllum Pursh, Acer mandshuricum Maxim., Acer oliverianum Pax, Acer pauciflorum W.P.Fang, Acer pensylvanicum L., Acer pentaphyllum Diels, Acer robustum Pax, Acer sikkimense Miq., Acer stachyophyllum Hiern, Acer sterculiaceum Wall., Acer tegmentosum Maxim., Acer tonkinense Lecomte, Acer triflorum Kom., Dipteronia dyeriana Henry, Acer lucidum F.P.Metcalf, Acer paxii Franch., Acer pentapomicum Stewart ex Brandis, Acer wardii W.W.Sm.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1305991 records from 1401 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081691-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z7bdtt
title: Occurrence Download

description: A dataset containing 226 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diplectrum macropoma (Günther, 1864)"
 ]
}

 The dataset includes 226 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032551-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nm49ry
title: Occurrence Download

description: A dataset containing 493 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhamnus betulifolia Greene"
 ]
}

 The dataset includes 493 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0268198-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.omuwgi
title: Occurrence Download

description: A dataset containing 343 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anolis christophei Williams, 1960",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 343 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078571-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ao5jgc
title: Occurrence Download

description: A dataset containing 3481 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Empoasca fabae (Harris, 1841)"
 ]
}

 The dataset includes 3481 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008466-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kbnfm9
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lates angustifrons Boulenger, 1906"
 ]
}

 The dataset includes 16 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0295355-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pjvp3z
title: Occurrence Download

description: A dataset containing 455 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cichla monoculus Agassiz, 1831"
 ]
}

 The dataset includes 455 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078578-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uyvjrb
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sedum corynephyllum Fröd."
 ]
}

 The dataset includes 94 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033803-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dzkhe6
title: Occurrence Download

description: A dataset containing 10981 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Eretmochelys imbricata (Linnaeus, 1766)",
 "TaxonKey is Tectona philippensis Benth. & Hook.f.",
 "TaxonKey is Shorea astylosa Foxw.",
 "TaxonKey is Dipterocarpus alatus A.DC."
 ]
}

 The dataset includes 10981 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008466-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9cv3mc
title: Occurrence Download

description: A dataset containing 342 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Croton mutisianus Kunth"
 ]
}

 The dataset includes 342 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021680-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.21151136
title: Additional file 3 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

description: Additional file 3: KEGG pathway analysis for DEGs in INSM２-knockdown SK-N-BE(2) cells with abs(log2(foldchange))&gt;1 and adjusted p value&lt;0.05.
DOI: 10.6084/m9.figshare.21151136.v1
title: Additional file 3 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

description: Additional file 3: KEGG pathway analysis for DEGs in INSM２-knockdown SK-N-BE(2) cells with abs(log2(foldchange))&gt;1 and adjusted p value&lt;0.05.
DOI: 10.6084/m9.figshare.21151139
title: Additional file 4 of Super-enhancer-associated INSM2 regulates lipid metabolism by modulating mTOR signaling pathway in neuroblastoma

description: Additional file 4: INSM２, FASN and ACC levels in NB patients.
DOI: 10.6084/m9.figshare.20098493.v1
title: Additional file 2 of Effects of glycemic traits on left ventricular structure and function: a mendelian randomization study

description: Additional file 2: Table S2. Characteristics of the single-nucleotide polymorphisms associated with insulin resistance and their associations with left ventricular parameters. Table S3. Characteristics of the single-nucleotide polymorphisms associated with fasting insulin and their associations with left ventricular parameters. Table S4. Characteristics of the single-nucleotide polymorphisms associated with glycated hemoglobin and their associations with left ventricular parameters. Table S5. Characteristics of the single-nucleotide polymorphisms associated with fasting glucose and their associations with left ventricular parameters.
DOI: 10.6084/m9.figshare.20102894
title: Comparative metabolomic study of three clones of <i>Eucommia ulmoides</i> wood

description: It is important to reveal the differences in the metabolites of different clones of <i>Eucommia</i> wood to explore the beneficial components of <i>Eucommia</i> wood and the selection of <i>Eucommia</i> wood. In this study, an extensive targeted metabolomic analysis was conducted on three different clones of <i>Eucommia</i> wood, Huazhong 12 <i>Eucommia</i> (HZ), Cili <i>Eucommia</i> (CL), and Miye <i>Eucommia</i> (MY), using UPLC-EI-MS/MS analysis. The results show that the <i>Eucommia</i> wood contains phenolic acids, lipids, amino acids and derivatives, organic acids, flavonoids, nucleotides and derivatives, terpenoids, lignans and coumarins, alkaloids, tannins, and other classes with a total of 854 metabolites. Among them, HZ and CL, HZ and MY, and MY and CL contain 99, 115, and 154 substantially different metabolites, respectively, enriched in 83, 128, and 199 metabolic pathways, mainly enriched in the metabolic pathways and biosynthesis of secondary metabolites. The metabolites in HZ with a relatively high content were sexangularetin-3-O-glucoside-7-O-rhamnoside, narcissin*, quercetin-3-O-sambubioside*, and quercetin-3-O-apiosyl(1→2)galactoside*; the metabolites in MY with a relatively high content were L-lysine and L-ornithine. The relatively more abundant metabolite in CL is 1,3,5-benzenetriol. The results of the study not only reveal that different clones of <i>Eucommia</i> wood have different metabolite components. This may provide not only different health functions to <i>Eucommia</i> wood, but also theoretical and technical support for the selection and breeding of good <i>Eucommia</i> species for timber and the enhancement of added value.
DOI: 10.6084/m9.figshare.12762682
title: Additional file 2 of Inverse correlation between Interleukin-34 and gastric cancer, a potential biomarker for prognosis

description: Additional file 2: Figure S2. Correlation of MCSF and CD68+ TAMs with clinicopathological parameters of age, gender and differentiation subtypes of GC. MCSF and CD68+ TAMs both have no correlations with any clinicopathological parameters of age, gender and differentiation subtypes of GC.
DOI: 10.6084/m9.figshare.22199830.v1
title: Crosstalk between m6A mRNAs and m6A circRNAs and the time-specific biogenesis of m6A circRNAs after OGD/R in primary neurons

description: Cerebral ischaemiareperfusion injury is an important pathological process in nervous system diseases during which neurons undergo oxygenglucose deprivation and reoxygenation (OGD/R) injury. No study has used epitranscriptomics to explore the characteristics and mechanism of injury. N6methyladenosine (m6A) is the most abundant epitranscriptomic RNA modification. However, little is known about m6A modifications in neurons, especially during OGD/R. m6A RNA immunoprecipitation sequencing (MeRIPseq) and RNA-sequencing data for normal and OGD/R-treated neurons were analysed by bioinformatics. MeRIP quantitative real-time polymerase chain reaction was used to determine the m6A modification levels on specific RNAs. We report the m6A modification profiles of the mRNA and circRNA transcriptomes of normal and OGD/R-treated neurons. Expression analysis revealed that the m6A levels did not affect m6A mRNA or m6A circRNA expression. We found crosstalk between m6A mRNAs and m6A circRNAs and identified three patterns of m6A circRNA production in neurons; thus, distinct OGD/R treatments induced the same genes to generate different m6A circRNAs. Additionally, m6A circRNA biogenesis during distinct OGD/R processes was found to be time specific. These results expand our understanding of m6A modifications in normal and OGD/R-treated neurons, providing a reference to explore epigenetic mechanisms and potential treatments for OGD/R-related diseases.
DOI: 10.6084/m9.figshare.21151177
title: Additional file 2 of Dynamic antimicrobial resistant patterns of Escherichia coli from healthy poultry and swine over 10 years in Chongming Island, Shanghai

description: Additional file 2: Table S1. The quantity of E. coli isolates from the involved farm in Chongming Island from 2009 to 2021. Table S2. Resistant rates for various antimicrobial classes and the resistance prevalence of antimicrobials in E. coli isolates, categorized by host of different production functions. Table S3. Profile composition and number of E. coli isolates from human and animal in Chongming Island, Shanghai.
DOI: 10.4121/822fc9bb-7b03-4e16-8bef-1c5964ed9aa5
title: Supporting data for: "On the scalability of helium-filled soap bubbles for volumetric PIV"

description: The dataset in this repository complements the publication: Grille Guerra, A., Scarano, F. & Sciacchitano, A. On the scalability of helium-filled soap bubbles for volumetric PIV. <em style="color:rgb(34, 34, 34);">Exp Fluids</em> <strong style="color:rgb(34, 34, 34);">65</strong>, 23 (2024). https://doi.org/10.1007/s00348-024-03760-w. The dataset contains the electronic supplementary material also available in the online version of the journal (two videos and a zipped file with the CAD geometry of the nozzle generator) and a digital version of the figures of the publication containing experimental data in Matlab figure format.
DOI: 10.4121/822fc9bb-7b03-4e16-8bef-1c5964ed9aa5.v1
title: Supporting data for: "On the scalability of helium-filled soap bubbles for volumetric PIV"

description: The dataset in this repository complements the publication: Grille Guerra, A., Scarano, F. & Sciacchitano, A. On the scalability of helium-filled soap bubbles for volumetric PIV. <em style="color:rgb(34, 34, 34);">Exp Fluids</em> <strong style="color:rgb(34, 34, 34);">65</strong>, 23 (2024). https://doi.org/10.1007/s00348-024-03760-w. The dataset contains the electronic supplementary material also available in the online version of the journal (two videos and a zipped file with the CAD geometry of the nozzle generator) and a digital version of the figures of the publication containing experimental data in Matlab figure format.
DOI: 10.6084/m9.figshare.21679660
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C4 (20LZK-111 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679660.v1
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C4 (20LZK-111 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679663
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material B (Element compositions)
DOI: 10.6084/m9.figshare.21679663.v1
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material B (Element compositions)
DOI: 10.6084/m9.figshare.21679666
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C6 (20LZK-155 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679666.v1
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C6 (20LZK-155 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679669
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C2 (20KJG-01 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679669.v1
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C2 (20KJG-01 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679672
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C5 (20LZK-121 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679672.v1
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C5 (20LZK-121 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679675
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C1 (19LCC-01 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679675.v1
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C1 (19LCC-01 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679678
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material D (Lu-Hf isotopes)
DOI: 10.6084/m9.figshare.21679678.v1
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material D (Lu-Hf isotopes)
DOI: 10.6084/m9.figshare.21679681
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material A (Kangjiagou section sandstone petrographic composition data)
DOI: 10.6084/m9.figshare.21679681.v1
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material A (Kangjiagou section sandstone petrographic composition data)
DOI: 10.6084/m9.figshare.21679687
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C3 (20KJG-07 U-Pb isotopes)
DOI: 10.6084/m9.figshare.21679687.v1
title: Formation and evolution of an Early Cambrian foreland basin in the northwest Yangtze Block, South China

description: Supplementary material C3 (20KJG-07 U-Pb isotopes)
DOI: 10.6084/m9.figshare.6999710
title: Additional file 1: of Forward and reverse mutations in stages of cancer development

description: Table S1. Information on 103 samples analyzed by AluScan. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.21151217
title: Additional file 1 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 1: ChIP-seq data used for identifying regulated targets of human transcription factors.
DOI: 10.6084/m9.figshare.21151217.v1
title: Additional file 1 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 1: ChIP-seq data used for identifying regulated targets of human transcription factors.
DOI: 10.6084/m9.figshare.21151226
title: Additional file 4 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 4: Number of regulated target genes of individual transcription factors combined from multiple ChIP-seq data sets.
DOI: 10.6084/m9.figshare.21151229.v1
title: Additional file 5 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 5: Table of all regulated targets of TFs.
DOI: 10.6084/m9.figshare.21151223
title: Additional file 3 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 3: Surrogate ChIP-seq data for finding indirect regulated targets of transcription factors.
DOI: 10.6084/m9.figshare.21151232
title: Additional file 6 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 6: Comparison of lists of regulated target genes generated here (ART-TF) with existing databases.
DOI: 10.6084/m9.figshare.21151226.v1
title: Additional file 4 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 4: Number of regulated target genes of individual transcription factors combined from multiple ChIP-seq data sets.
DOI: 10.6084/m9.figshare.21151220.v1
title: Additional file 2 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 2: Regulated targets of transcription factors identified based on each ChIP-seq data set. The second worksheet includes counts of ChIP-seq data sets that yielded some regulated target genes for each TF.
DOI: 10.6084/m9.figshare.21151229
title: Additional file 5 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 5: Table of all regulated targets of TFs.
DOI: 10.6084/m9.figshare.21151235
title: Additional file 7 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 7: Similarity of sets of regulated target genes of most strongly overlapping 150 TFs in ESCs; z-values show the significance of overlap between gene sets (hypergeometric test).
DOI: 10.6084/m9.figshare.21151238.v1
title: Additional file 8 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 8: Similarity of sets of regulated target genes of TFs in ESCs; z-values show the significance of overlap between gene sets (hypergeometric test).
DOI: 10.6084/m9.figshare.21151235.v1
title: Additional file 7 of Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

description: Additional file 7: Similarity of sets of regulated target genes of most strongly overlapping 150 TFs in ESCs; z-values show the significance of overlap between gene sets (hypergeometric test).