cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21282454.v1
title: Additional file 5 of Global diversity and distribution of prophages are lineage-specific within the Ralstonia solanacearum species complex

description: Additional file 5: Table S4A. PHASTER prophage genome information. Table S4B. PhiSpy prophage genome information. Table S4C. Virsorter2 + CheckV prophage genome information. Table S4D. Combined PHASTER/PhiSpy/Virsorter2+CheckV hits with grouped prophages labels. Table S4E. De-duplicated prophage hits. Table S4F. Filtered PHASTER intact prophages with taxonomic labels and/or cross-tool validation.
DOI: 10.6084/m9.figshare.21282454
title: Additional file 5 of Global diversity and distribution of prophages are lineage-specific within the Ralstonia solanacearum species complex

description: Additional file 5: Table S4A. PHASTER prophage genome information. Table S4B. PhiSpy prophage genome information. Table S4C. Virsorter2 + CheckV prophage genome information. Table S4D. Combined PHASTER/PhiSpy/Virsorter2+CheckV hits with grouped prophages labels. Table S4E. De-duplicated prophage hits. Table S4F. Filtered PHASTER intact prophages with taxonomic labels and/or cross-tool validation.
DOI: 10.6084/m9.figshare.21282457
title: Additional file 6 of Global diversity and distribution of prophages are lineage-specific within the Ralstonia solanacearum species complex

description: Additional file 6: Table S5A. VIGA annotations of intact prophages. Table S5B. Megablast results of intact prophage metabolic genes (CAZy database). Table S5C. Megablast results of intact prophage type III effectors (Ralsto T3E database). Table S5D. Megablast results of intact prophage virulence factors (Phi-Base database). Table S5E. Predicted functions of abundant intact prophage hypothetical proteins using Structure-based function tool.
DOI: 10.6084/m9.figshare.21282457.v1
title: Additional file 6 of Global diversity and distribution of prophages are lineage-specific within the Ralstonia solanacearum species complex

description: Additional file 6: Table S5A. VIGA annotations of intact prophages. Table S5B. Megablast results of intact prophage metabolic genes (CAZy database). Table S5C. Megablast results of intact prophage type III effectors (Ralsto T3E database). Table S5D. Megablast results of intact prophage virulence factors (Phi-Base database). Table S5E. Predicted functions of abundant intact prophage hypothetical proteins using Structure-based function tool.
DOI: 10.6084/m9.figshare.21282396
title: Data sets.rar

description: Data sets for skin detection Using the data sets, we can perform the skin detection based on transfer learning.
DOI: 10.25912/rdf_1665022859542
title: Development and Validation of the VCSDQ to Evaluate Food Groups Intakes and Dietary Practices among 9-11-Year-Olds Children in Urban Vietnam
DOI: 10.5517/ccdc.csd.cc2c53wk
title: CCDC 2179668: Experimental Crystal Structure Determination

description: Related Article: Weizuo Li|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21282480
title: Raw data - Analysis of differential metabolites and metabolic pathways in adipose tissue of tree shrews (Tupaia belangeri) under gradient cooling acclimation

description: <strong>The raw data of the article “Analysis of differential metabolites and metabolic pathways in adipose tissue of tree shrews (</strong><em><strong>Tupaia belangeri</strong></em><strong>) under gradient cooling acclimation”.</strong>
DOI: 10.25919/dxaz-hb06
title: Parkes observations for project P1119 semester 2022APRS_03

description: Recently, low-frequency periodic radio pulses have been detected from the prototypical M-dwarf flare star, UV Ceti. This shows that the low-frequency emission from this star is driven by auroral activity, in stark contrast to the solar-like coronal activity exhibited at microwave–X-ray wavelengths. However, the driver of this auroral activity is unclear. Possible drivers of this aurora include breakdown of co-rotation with a magnetospheric plasma disk, or the sub-Alfv\'enic interaction of the star with a companion planet. Expected signatures of the latter mechanism include small deviations of the radio pulse period from the stellar rotation period, or a modulation of the pulsed radio emission at the planetary orbital period. To detect these signatures, we require long-term, wide-band monitoring of the radio pulses. In this proposal, we seek to accurately measure the pulse rotation period of UV Ceti by measuring the pulse arrival times over four epochs separated by timescales of days--weeks. This will form an important part of the groundwork for detecting signatures of the auroral engine in future long-term monitoring. If successful, this project will mark the first steps toward unveiling the signature of star-planet interaction in this benchmark M-dwarf. This will enable this type of emission to be used as a future probe of exoplanetary systems.
DOI: 10.25919/ya0p-zg09
title: Parkes observations for project P1123 semester 2022APRS_01

description: ASKAP sensitivity decreases quickly on large scales dropping to zero at the minimum baseline scale. Projects EMU and POSSUM are thus hampered in studying large objects (e.g. SNR, nearby galaxies, galaxy clusters, AGNs, the Galactic diffuse emission). Combination with data from a large single-dish telescope is required. The project GMIMS aims to cover the band 300-1800 MHz to study the properties of the Galactic magneto-ionic medium and magnetic field thanks to its unique resolution and dynamic range in RM space. Only the lower and upper end of the band have been observed in the south limiting its capabilities. Here we propose to conduct a pilot for PEGASUS (POSSUM EMU GMIMS All Stokes UWL Survey), a spectropolarimetric survey to map the entire southern sky up to Dec=+20 deg with the Parkes Radio Telescope, in the frequency range 704-1440-MHz. The goal is to map the large-scale emission in Stokes I, Q, U to serve those three cutting-edge projects. PEGASUS will: provide the large angular scales that ASKAP misses enabling EMU and POSSUM to study large-scale objects; complete coverage of the GMIMS 300-1800 MHz band in the South, and significantly improve its capability to investigate the magnetic properties of the Milky Way. In this pilot we aim to demonstrate that ASKAP and single-dish data can be combined, and the scanning strategy can be realized. The target is a Galactic EMU-POSSUM commensal Pilot II field with extended SNRs.
DOI: 10.48577/jpl.gbk7wj
title: Companion dataset for "Energy Deposition by Mesoscale High-latitude Electric Fields into the Thermosphere During the 26 October 2019 Geomagnetic Storm"

description: The dataset contains numerical modeling output files used to produce figures in the paper. The data set is in binary format.
DOI: 10.23708/zprfhr
title: Escherichia coli concentration in overland flow and in groundwater in the Houay Pano catchment, Northern Lao PDR (2012-2014)

description: This dataset has been collected thanks to the long-term partnership with Department of Agricultural Land Management (DALaM), Lao PDR, which granted the permission for field access, and to the financial, scientific, technical, and/or logistical support of the Multiscale TROPIcal CatchmentS (SNO M-TROPICS; https://mtropics.obs-mip.fr/) critical zone observatory (previously MSEC). This .csv dataset includes Escherichia coli concentration measured in overland flow and in groundwater within the Houay Pano catchment, Northern Lao PDR, in 2012 and 2014. Sampling in overland flow have been made on a range of different land uses described in the Readme file. The authors acknowledge the financial support of the Institut de Recherche pour le Développement (IRD), the GIS-Climat (http://www.gisclimat.fr/projet/pastek.html), and the French National Research Agency (TecItEasy project; ANR-13-AGRO-0007).
DOI: 10.6084/m9.figshare.20407647.v2
title: Effect of feed enriched by products formulated from coconut water, palm sap sugar, and mushroom on the chemical composition of feed and carcass, growth performance, body indices, and gut micromorphology of giant gourami, Osphronemus goramy (Lacepède, 1801), juveniles

description: <strong>Background:</strong> Giant gourami (Osphronemus goramy Lacepede, 1801) is a freshwater species of Indonesia's most important commercial fish, and most of the giant gourami is produced by aquaculture. The first purpose of this investigation is to determine the effect of various newly formulated products on the amino acid composition of the diet and whole-body carcass. The second aim is to analysed the impact of newly formulated products on the growth performance, body indices, and gut micromorphology. <strong>Methods:</strong> A total of 1.0 litres of palm sap sugar solution and 2.0 litres of mature coconut water were formulated. Each 1.0-litre product formulated was added to 2 g of Aspergillus niger (labeled CP2), 2 g of Rhizopus oligosporus (labeled CP3), and 2 g of Saccharomyces cerevisiae (labeled CP4). Commercial aquafeed to which freshwater was added was labeled CP1 (placebo). Aquafeed was added to CP1 and supplemented with CP2, CP3, and CP4 (labeled KP1, KP2, KP3, and KP4 diets). Their dosage was 150 ml/kg of feed. Juvenile giant gourami (initial weight 50 ± 0.25 g and length 13.2 ± 0.07 cm) were reared in triplicate net frames (2 m × 1 m × 1 m; water volume 1.5 m3/frame nets) in a freshwater concrete pond. The juveniles were randomly distributed at a stocking density of 30 juveniles/net. <strong>Results:</strong> Results support our hypothesis that different product formulations have a significant effect (P &lt; 0.05) on aquafeed nutrition and the whole-body carcass, growth indices, fish feed efficiency, and gut micromorphology of giant gourami juveniles. The KP3 diet contains a higher concentration of amino acids, which increased the growth rate, feed efficiency, and carcass quality more than the other diets that we tested. <strong>Conclusion:</strong> Diet KP3 contains higher total amino acids in diets and carcasses and gives the better growth of giant gourami.
DOI: 10.5281/zenodo.7151431
title: Mt Edgecumbe Sentinel 1 SLC scenes and pairs

description: This dataset contains lists of all SLC files used in the paper "Return from Dormancy: Rapid inflation and seismic unrest driven by transcrustal magma transfer at Mt. Edgecumbe (L'ux Shaa) Volcano, Alaska" by R. Grapenthin, Y. Cheng, M. Angarita, D. Tan, F. Meyer, D. Fee, A. Wech, published in GRL in 2022. The file contains all the dates of Sentinel 1 paths 50, 79 (Ascending) and 174 (descending) scenes and the respective pairing of SLC observations for interferograms in YYYYMMDD_YYYYMMDD format.
DOI: 10.5281/zenodo.7151430
title: Mt Edgecumbe Sentinel 1 SLC scenes and pairs

description: This dataset contains lists of all SLC files used in the paper "Return from Dormancy: Rapid inflation and seismic unrest driven by transcrustal magma transfer at Mt. Edgecumbe (L'ux Shaa) Volcano, Alaska" by R. Grapenthin, Y. Cheng, M. Angarita, D. Tan, F. Meyer, D. Fee, A. Wech, published in GRL in 2022. The file contains all the dates of Sentinel 1 paths 50, 79 (Ascending) and 174 (descending) scenes and the respective pairing of SLC observations for interferograms in YYYYMMDD_YYYYMMDD format.
DOI: 10.6084/m9.figshare.21283143
title: MK22020316022-fengjianyi-515F_907R-9sam.result.zip

description: 16 s sequence and analysis
DOI: 10.6084/m9.figshare.21283143.v1
title: MK22020316022-fengjianyi-515F_907R-9sam.result.zip

description: 16 s sequence and analysis
DOI: 10.5281/zenodo.7151475
title: Effect of host light level on the M sativa P japonicum interaction

description: This dataset shows the data for an experiment to explore the relationship between the hemiparasite Phtheirospermum japonicum and host plant Medicago sativa, where the host wss subject to high or low light levels
DOI: 10.5281/zenodo.7151474
title: Effect of host light level on the M sativa P japonicum interaction

description: This dataset shows the data for an experiment to explore the relationship between the hemiparasite Phtheirospermum japonicum and host plant Medicago sativa, where the host wss subject to high or low light levels
DOI: 10.25912/rdf_1665031561571
title: Musical training refines audiovisual integration but does not influence temporal recalibration
DOI: 10.5281/zenodo.6912860
title: Factors influencing halide vacancy transport in perovskite solar cells

description: Python code will generate high grid structures in CsPbX<sub>3</sub> (X=Cl, Br, I) and a migration path. It will collect the data from a customized number of grids and calculate the migration barrier. Various factors, such as defect charge states or pressure, can be applied to high grid structures to consider device-like conditions. Examples of CsPbI<sub>3</sub> high grid structures are named by {#of grids}_{grid point x}_{grid point y}.
DOI: 10.5281/zenodo.6912859
title: Factors influencing halide vacancy transport in perovskite solar cells

description: Python code will generate high grid structures in CsPbX<sub>3</sub> (X=Cl, Br, I) and a migration path. It will collect the data from a customized number of grids and calculate the migration barrier. Various factors, such as defect charge states or pressure, can be applied to high grid structures to consider device-like conditions. Examples of CsPbI<sub>3</sub> high grid structures are named by {#of grids}_{grid point x}_{grid point y}.
DOI: 10.26180/21284424
title: Multivariate developmental plasticity

description: Dataset for manuscript titled 'Univariate and multivariate plasticity in response to incubation temperature in an Australian lizard'
DOI: 10.26180/21284424.v1
title: Multivariate developmental plasticity

description: Dataset for manuscript titled 'Univariate and multivariate plasticity in response to incubation temperature in an Australian lizard'
DOI: 10.5517/ccdc.csd.cc2c5q1b
title: CCDC 2180231: Experimental Crystal Structure Determination

description: Related Article: Hongxiao Lv|2022|CSD Communication|||
description: Related Article: Hongxiao Lv, Hongtai Chen, Liming Fan, Xiutang Zhang|2022|Inorg.Chem.|61|15558|doi:10.1021/acs.inorgchem.2c02302
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15151/esrf-es-874776054
title: Structural and dynamical studies from the Gothenburg BAG

description: This BAG has been remodeled in 2021 so as to reflect the realities of ESRF usage. Several years ago, at the request of the ESRF, we merged with scientists at Lund University to create a joint Gothenburg/Lund BAG. In practice, as MAX IV Laboratory (Lund) has been increasingly successful at serving the needs of its users, demand for ESRF BAG time from scientists based in Lund decreased. We are therefore returning this BAG to be from scientists at the University of Gothenburg only, which both reflects the reality of the situation and simplifies management of the BAG. Moreover, our interests of scientists at the University of Gothenburg have become increasingly dominated by serial synchrotron crystallography applications and difference X-ray scattering. For these reasons our request for beamtime has changed to create more space for these methodology developments, while maintaining an appropriate request for access to more traditional cryo-crystallography approaches.
DOI: 10.15151/esrf-es-874802477
title: NORWAY BAG

description: The fifteen PIs associated to this proposal represent the entire crystallography community in Norway and are affiliated to the major Norwegian universities. The research interests of the PIs and their collaborators revolves around topics linked to structural biology and material sciences. We apply for beam time for single- and multi-wavelength MX, Bio-SAXS and Cryo-EM, in support of our research projects funded e.g. by the Research Council of Norway and the ERC. Examples of research projects or topics are carbohydrate-active proteins of medical or bioeconomic relevance, inhibition of DNA repair enzymes, metalloprotein function and catalysis, regulation of cell-cycle processes, enzyme discovery, antibiotic resistance/drug-discovery and neurological diseases. Our overarching aim is to use bright synchrotron sources to produce high quality science.
DOI: 10.15151/esrf-es-885249588
title: Structural Biology of Macromolecules and Macromolecular complexes from India

description: Structural biology research groups located in India constitute the INDIA-BAG and will utilize MX & SAXS to study different biological macromolecules. The non-proprietary agreement signed between ESRF and the Department of Biotechnology (DBT) enables studies that provide fundamental mechanistic insight regarding different biological processes. A brief description of over 50 research groups is provided in the global summary and a summary of their research contributions involving data collected at ESRF is provided in the 2 year BAG report. The ESRF-India partnership is supported by a single grant provided to the RCB by the DBT. Please note that a report listing no. of shifts utilized, details of users and the research output from these visits has to be sent to the DBT to obtain release of funds to pay ESRF membership dues. Consequently, all the structural biologists from India are grouped in a single BAG to enable monitoring of progress to collect the required statistics.
DOI: 10.15151/esrf-es-885526466
title: BAG Barcelona

description: BAG Barcelona has a long tradition of accessing the ESRF. It is constituted by 10 groups that belong to the Institute of Molecular Biology Barcelona from the Spanish Research Council (IBMB-CSIC), the Institute for Research in Biomedicine (IRB), and the Research Institute from Hospital Santa Creu i Sant Pau (HSCSP-IR). The main subjects of research are protein/DBA complexes, molecular machines, compounds of viruses, molecular mechanisms of proteases, and other enzymes. Recently, a new group (E. Marcos) interested in de-novo designed protein scaffolds has joined the BAG. Our Scientific results strongly rely on the high-quality data and excellent performance and support of ESRF macromolecular crystallography beamlines.
DOI: 10.15151/esrf-es-902989083
title: Modeling the short-range order in a one-dimensional lead halide pseudo-perovskite

description: We have recently described the short-range ordering due to Pb/Bi/vacancy substitution on the metal cation sites of the monodimensional lead halide pseudoperovskite (TMSO)3Pb3xBi2(1-x)I9. The clustering between defects occurring at the nanometer range is probably the cause for the appearance of very peculiar trapezoidal diffraction peak shapes on (hkl) peaks with non-zero h. We then developed a statistical model of disorder to simulate the XRD pattern and fitting to the experimental data, analogous to our earlier work on metals. The model fits well to laboratory data on a limited Q-range, but higher resolution on a wide range is needed to validate it and allow for reliable structure-properties correlation.
DOI: 10.15151/esrf-es-956049892
title: Precise characterization of beam damage on hybrid lead halide perovskite thin layers.

description: Precise characterization of beam damage on hybrid lead halide perovskite thin layers on EH3
DOI: 10.15151/esrf-es-946950822
title: Magnetism in SrNi2P2 and GdCo2Si2

description: Magnetism in SrNi2P2 and GdCo2Si2
DOI: 10.15151/esrf-es-946957811
title: Spin dynamics in PrCo2P2

description: Spin dynamics in PrCo2P2
DOI: 10.5281/zenodo.7151638
title: Delphi survey on clinical signs and symptoms at primary health facilities

description: Data from a Delphi survey conducted among 30 primary health care workers in Tanzania. The Delphi survey was based on a recent Delphi study among international experts on predictors of sepsis in children under five and included questions about each clinical element based on three domains: 1. Reliability of measurement, 2. Frequency of finding an abnormal value, and 3. Level of training required. Additionally, availability of instruments to measure vital signs and other challenges in collecting each element were evaluated. The answers were classified using a 5-point Likert scale: minimal, moderate, high, not applicable, I don’t know. The answer options for the availability of vital sign instruments were yes/no/I don’t know. We also collected data on the professional background and expertise of the participants.
DOI: 10.5281/zenodo.7151637
title: Delphi survey on clinical signs and symptoms at primary health facilities

description: Data from a Delphi survey conducted among 30 primary health care workers in Tanzania. The Delphi survey was based on a recent Delphi study among international experts on predictors of sepsis in children under five and included questions about each clinical element based on three domains: 1. Reliability of measurement, 2. Frequency of finding an abnormal value, and 3. Level of training required. Additionally, availability of instruments to measure vital signs and other challenges in collecting each element were evaluated. The answers were classified using a 5-point Likert scale: minimal, moderate, high, not applicable, I don’t know. The answer options for the availability of vital sign instruments were yes/no/I don’t know. We also collected data on the professional background and expertise of the participants.
DOI: 10.34740/kaggle/dsv/3989065
title: Erbil Heart Disease Dataset
DOI: 10.6084/m9.figshare.21019963
title: Crop Wild Relatives conservation in Switzerland. Distribution of priority CWR

description: Species distribution (observed and modelled) of 265 priority crop wild relatives in Switerland. Appendix S5 from Petitpierre et al. <strong>"Importance of agriculture for Crop Wild Relatives conservation in Switzerland"</strong>
DOI: 10.6084/m9.figshare.21019963.v1
title: Crop Wild Relatives conservation in Switzerland. Distribution of priority CWR

description: Species distribution (observed and modelled) of 265 priority crop wild relatives in Switerland. Appendix S5 from Petitpierre et al. <strong>"Importance of agriculture for Crop Wild Relatives conservation in Switzerland"</strong>
DOI: 10.26106/mwbc-kp63
title: Global self-esteem and body esteem as predictors of intuitive eating among young adult men and women - concept
DOI: 10.11583/dtu.19446944.v1
title: SEAwise quantitative metadatabase

description: This metadatabase contains links to data used to analyse effects of environment on fish and fisheries and of fish and fisheries on the ecological and social system in the SEAwise project. More information is available at https://www.seawiseproject.org/
DOI: 10.11583/dtu.19447265.v1
title: SEAwise qualitative metadatabase

description: The SEAwise project works to deliver a fully operational tool that will allow fishers, managers, and policy makers to easily apply Ecosystem Based Fisheries Management (EBFM) in their own fisheries. With the input from advice users, SEAwise identifies and addresses core challenges facing EBFM, creating tools and advice for collaborative management aimed at achieving long-terms goals under environmental change and increasing competition for space. <br> The present data provides metadata describing the qualitative data collected during the data in interviews and workshops and contact persons for further information. <br> More information is available at https://www.seawiseproject.org/ <br>