cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13487605.v1
title: Genetic variation underlies the plastic response to shade of snapdragon plants (<i>Antirrhinum majus</i> L.)

description: A classic example of phenotypic plasticity in plants is the set of traits that change in response to shade. There is widespread evidence that plants in low light conditions often avoid shade by growing taller or by increasing their photosynthetic efficiency, i.e. the shade avoidance syndrome. Whether this plasticity might evolve in response to natural selection depends upon the presence of its standing genetic variation in wild populations. There is limited evidence for heritable standing variation in the plastic response of plants to shade. In this study, we used an experimental common garden approach to investigate this plastic response in snapdragon plants (<i>Antirrhinum majus</i> L.) originating from four natural populations from the Mediterranean region. Our results showed that individual plants reacted strongly to the presence of shade by growing longer shoots, longer internodes, and increasing their specific leaf area in these four populations. Our results also revealed genetic variation for the plastic response within these populations, as well as little genetic constraints to its evolution. Our findings imply that natural populations of <i>A. majus</i> harbour standing genetic variation for phenotypic plasticity in response to shade, providing them the potential to evolve in response to selection.
DOI: 10.5286/isis.e.rb1910370-3
title: Accounting for textural effects on total scattering data and the pair-distribution function

description: The total scattering technique has become an invaluable method for probing the local structure of materials in a host of interesting fields. However, the technique is reliant on some assumptions about the nature of the material being studied that currently limits the application of the technique in certain fields. Of particularly significance is the orientation of grains within the sample, known as texture, which can be strongly dependent on the method of manufacture of the material. By considering some important test case materials, we will investigate the affect of texture on total scattering measurements. From this information it will be possible to provide additional functionality to the instrument on which the samples are measured, open up the field of study and provide insight into some important materials.
DOI: 10.5286/isis.e.rb2010753-2
title: Magnetism close to the Majumdar-Ghosh point in the natural mineral szenicsite

description: There is huge interest in studying the intrinsic magnetism of minerals and how the physical properties of similar structures differ from each other. We week to understand the magnetism within szenicsite, a Cu based compound where the crystal structure was solved only in 1998. What is interesting is that it is made up of triple chains of Cu-O ions that run down the c-axis and it is believed that the middle chain behaves like a Heisenberg magnet, but the chains on the outside form dimers. Therefore there is some extremely interesting physics at play. To date, the evidence for this come from simulations combined with magnetic susceptibility and heat capacity measurements however we believe that µSR can provide more conclusive information.
DOI: 10.13140/rg.2.2.22968.47369
title: Billegrav2 logs
DOI: 10.15468/zk3avz
title: New species of Cyphocharax (Characiformes: Curimatidae) from the upper rio Negro, Amazon basin

description: This dataset contains the digitized treatments in Plazi based on the original journal article Melo, Bruno F., Vari, Richard P. (2014): New species of Cyphocharax (Characiformes: Curimatidae) from the upper rio Negro, Amazon basin. Neotropical Ichthyology 12 (2): 327-332, DOI: 10.1590/1982-0224-20130153, URL: http://dx.doi.org/10.1590/1982-0224-20130153
DOI: 10.5519/qd.98gxeb53
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4793223 records)
DOI: 10.5519/qd.olqqufjh
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4793223 records)
DOI: 10.15468/n47fvp
title: A new species of Characidium (Characiformes: Crenuchidae) from small coastal drainages in northeastern Brazil, with remarks on the pseudotympanum of some species of the genus

description: This dataset contains the digitized treatments in Plazi based on the original journal article Zanata, Angela M., Camelier, Priscila (2014): A new species of Characidium (Characiformes: Crenuchidae) from small coastal drainages in northeastern Brazil, with remarks on the pseudotympanum of some species of the genus. Neotropical Ichthyology 12 (2): 333-342, DOI: 10.1590/1982-0224-20130168, URL: http://dx.doi.org/10.1590/1982-0224-20130168
DOI: 10.6084/m9.figshare.14627052
title: ANPP.xlsx

description: Proper estimation of the herb layer annual net primary production (ANPP) can help to appreciate the role of this layer in carbon assimilation and nutrient cycling. Simple methods of ANPP estimation often understate its value. More accurate methods take into account biomass increments of individual species but are more laborious. We conducted our study in an oak-hornbeam forest (site area 12 ha) dominated by beech in NW Poland during two growing seasons (2010 and 2011). We collected herb layer biomass from 7 to 10 square frames (0.6×0.6 m). We collected plant biomass every week in April and May and every two weeks for the rest of the growing season. We compared six methods of calculating ANPP. The highest current year standing biomass (1<sup>st</sup> method of ANPP calculation) was obtained on 15<sup>th</sup> May 2010 – 37.8 g m<sup>-2</sup> and 7<sup>th</sup> May 2011 – 41.0 g m<sup>-2</sup>. The highest values of ANPP were obtained by the 6<sup>th</sup> method based on the sum of the highest products of shoot biomass and density for individual species: 74.3 g m<sup>‑2</sup> year<sup>-1</sup> in 2010 and 94.0 g m<sup>-2</sup> year<sup>‑1</sup> in 2011. The spring ephemeral <i>Anemone nemorosa</i> had the highest share of ANPP with 50% of the total ANPP. Two summer-greens, <i>Galeobdolon luteum</i> and <i>Galium odoratum</i>, each had a ca. 10% share of ANPP. The best results of ANPP calculation resulted from laborious tracking of dynamics of biomass and density of individual shoots.
DOI: 10.5284/1085020
title: Images from an Evaluation at Combe Cross, Filham, Ivybridge, Devon 2020

description: This collection comprises of site photographs taken during an archaeological evaluation carried out by Cotswold Archaeology at Combe Cross, Filham, Ivybridge, Devon in March 2020.
DOI: 10.5281/zenodo.4775861
title: Dataset to synthesis paper "Dehesas as high nature value farming systems: A social-ecological synthesis of drivers, pressures, state, impacts, and responses"

description: This dataset is part of the study "Dehesas as high nature value farming systems: A social-ecological synthesis of drivers, pressures, state, impacts, and responses" (Plieninger et al, 2021, Ecology and Society). All coded variables are described in Table 1 and Table 2 of the open-access journal article.
DOI: 10.5281/zenodo.4775860
title: Dataset to synthesis paper "Dehesas as high nature value farming systems: A social-ecological synthesis of drivers, pressures, state, impacts, and responses"

description: This dataset is part of the study "Dehesas as high nature value farming systems: A social-ecological synthesis of drivers, pressures, state, impacts, and responses" (Plieninger et al, 2021, Ecology and Society). All coded variables are described in Table 1 and Table 2 of the open-access journal article.
DOI: 10.15468/d9fynt
title: A new species of Neoplecostomus Eigenmann & Eigenmann, 1888 (Siluriformes: Loricariidae: Neoplecostominae) from the upper rio Paraná basin

description: This dataset contains the digitized treatments in Plazi based on the original journal article Andrade, Breno Neves, Langeani, Francisco (2014): A new species of Neoplecostomus Eigenmann & Eigenmann, 1888 (Siluriformes: Loricariidae: Neoplecostominae) from the upper rio Paraná basin. Neotropical Ichthyology (Neotrop. Ichthyol.) 12 (4): 675-681, DOI: 10.1590/1982-0224-20130195, URL: http://dx.doi.org/10.1590/1982-0224-20130195
DOI: 10.15468/vpeyme
title: Deep-sea squat lobsters of the genus Paramunida Baba, 1988 (Crustacea: Decapoda: Munididae) from the Philippines Panglao 2004, Panglao 2005 and Aurora 2007 expeditions, with the description of three new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Cabezas, Patricia, Chan, Tin-Yam (2014): Deep-sea squat lobsters of the genus Paramunida Baba, 1988 (Crustacea: Decapoda: Munididae) from the Philippines Panglao 2004, Panglao 2005 and Aurora 2007 expeditions, with the description of three new species. Raffles Bulletin of Zoology 62: 302-316, DOI: http://doi.org/10.5281/zenodo.4502233
DOI: 10.5258/soton/d1623
title: Dataset for: Orbital stability of compact three-planet systems, II: Post-instability impact behaviour

description: Dataset for the paper "Orbital stability of compact three-planet systems, II: Post-instability impact behaviour" in Monthly Notices of the Royal Astronomical Society.
DOI: 10.15468/bga9pe
title: Phuphania costata, a new species of dyakiid land snail (Pulmonata: Dyakiidae) from Phu Pha Lom limestone area, Loei Province, northeastern Thailand

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tumpeesuwan, Chanidaporn, Tumpeesuwan, Sakboworn (2014): Phuphania costata, a new species of dyakiid land snail (Pulmonata: Dyakiidae) from Phu Pha Lom limestone area, Loei Province, northeastern Thailand. Raffles Bulletin of Zoology 62: 352-357, DOI: http://doi.org/10.5281/zenodo.4502260
DOI: 10.5258/soton/d1815
title: IMPETUS Water Demand Microsimulation Model output

description: Resiential water demand microsimulation data based on the SPRG water practices survey, EST water use by appliance data, Metoffice climate data and CEH drought histroy data.
DOI: 10.15468/qpwe37
title: A new catfish species of the genus Trichomycterus (Siluriformes: Trichomycteridae) from the río Orinoco versant of Páramo de Cruz Verde, Eastern Cordillera of Colombia

description: This dataset contains the digitized treatments in Plazi based on the original journal article DoNascimiento, Carlos, Prada-Pedreros, Saúl, Guerrero-Kommritz, Jürgen (2014): A new catfish species of the genus Trichomycterus (Siluriformes: Trichomycteridae) from the río Orinoco versant of Páramo de Cruz Verde, Eastern Cordillera of Colombia. Neotropical Ichthyology 12 (4): 717-728, DOI: 10.1590/1982-0224-20140005, URL: http://dx.doi.org/10.1590/1982-0224-20140005
DOI: 10.25405/data.ncl.14614179
title: Output parameters.xlsx

description: Output parameters from the optimal dispatch model developed in NCL used for the demonstration of the evaluation framework developed in my PhD, for the North of Tyne region case study with integrated energy networks
DOI: 10.17909/t9-e1dq-2r77
title: Test Swift DOI 4

description: Test
DOI: 10.15468/mb4m8f
title: A new species of the armored catfish Parotocinclus (Loricariidae: Hypoptopomatinae), from the Amazon basin in Colombia

description: This dataset contains the digitized treatments in Plazi based on the original journal article A, Pablo Lehmann, Schvambach, Lucas J., Reis, Roberto E. (2015): A new species of the armored catfish Parotocinclus (Loricariidae: Hypoptopomatinae), from the Amazon basin in Colombia. Neotropical Ichthyology (Neotrop. Ichthyol.) 13 (1): 47-52, DOI: 10.1590/1982-0224-20140113, URL: http://dx.doi.org/10.1590/1982-0224-20140113
DOI: 10.3886/e116022v1-87040
title: Replication data for: Vouchers for Private Schooling in Colombia: Evidence from a Randomized Natural Experiment

description: Colombia used lotteries to distribute vouchers which partially covered the cost of private secondary school for students who maintained satisfactory academic progress. Three years after the lotteries, winners were about 10 percentage points more likely to have finished 8th grade, primarily because they were less likely to repeat grades, and scored 0.2 standard deviations higher on achievement tests. There is some evidence that winners worked less than losers and were less likely to marry or cohabit as teenagers. Benefits to participants likely exceeded the $24 per winner additional cost to the government of supplying vouchers instead of public-school places.
DOI: 10.15468/mwf2tn
title: Review of the dwarf Glossogobius lacking head pores from the Malili lakes, Sulawesi, with a discussion of the definition of the genus.

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hoese, Douglass F., Hadiaty, Renny Kurnia, Herder, Fabian (2015): Review of the dwarf Glossogobius lacking head pores from the Malili lakes, Sulawesi, with a discussion of the definition of the genus. Raffles Bulletin of Zoology 63: 14-26, DOI: http://doi.org/10.5281/zenodo.4502305
DOI: 10.15468/qejsvd
title: Description of Orthoprotella bicornis, new species, and Paraprotella teluksuang, new species (Crustacea: Amphipoda) from Johor, Malaysia with special reference to unusual sexual bias towards females in Paraprotella

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lim, Jacqueline Hui Chern, Othman, Bin Haji Ross, Takeuchi, Ichiro (2015): Description of Orthoprotella bicornis, new species, and Paraprotella teluksuang, new species (Crustacea: Amphipoda) from Johor, Malaysia with special reference to unusual sexual bias towards females in Paraprotella. Raffles Bulletin of Zoology 63: 33-48, DOI: http://doi.org/10.5281/zenodo.4502389
DOI: 10.5281/zenodo.4775974
title: Cooperation of two opposite flagella allows high-speed swimming and active turning in zoospores

description: This contains the data of zoospores swimming in water at global scale and the Matlab file containing the simulation.
DOI: 10.3886/e127824
title: Code for Efficiency and Equity Impacts of Energy Subsidies

description: Replication code for AER-2018-0441
DOI: 10.3886/e127824v1
title: Code for Efficiency and Equity Impacts of Energy Subsidies

description: Replication code for AER-2018-0441
DOI: 10.15468/enu4vj
title: A new deep-sea species of Barathronus Goode & Bean from Brazil, with notes on Barathronus bicolor Goode & Bean (Ophidiiformes: Aphyonidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Nielsen, Jørgen G., Mincarone, Michael M., Dario, Fabio Di (2015): A new deep-sea species of Barathronus Goode & Bean from Brazil, with notes on Barathronus bicolor Goode & Bean (Ophidiiformes: Aphyonidae). Neotropical Ichthyology (Neotrop. Ichthyol.) 13 (1): 53-60, DOI: 10.1590/1982-0224-20140034, URL: http://dx.doi.org/10.1590/1982-0224-20140034
DOI: 10.5281/zenodo.4775919
title: Goniobranchus kuniei SPAdes preassembly

description: .
DOI: 10.5281/zenodo.4775918
title: Goniobranchus kuniei SPAdes preassembly

description: .
DOI: 10.15468/85m5nz
title: Sinoennea loeiensis, a new species of diapherid microsnail (Pulmonata: Streptaxoidea: Diapheridae) from Phu Pha Lom Limestone Hill, Loei Province, Northeastern Thailand

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tanmuangpak, Kitti, Dumrongrojwattana, Pongrat, Tumpeesuwan, Chanidaporn, Tumpeesuwan, Sakboworn (2015): Sinoennea loeiensis, a new species of diapherid microsnail (Pulmonata: Streptaxoidea: Diapheridae) from Phu Pha Lom Limestone Hill, Loei Province, Northeastern Thailand. Raffles Bulletin of Zoology 63: 293-300, DOI: http://doi.org/10.5281/zenodo.4502341
DOI: 10.15468/q7n4t7
title: Species of the anglerfish genus Chaunax from Indonesia, with descriptions of two new species (Lophiiformes: Chaunacidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ho, Hsuan-Ching, Kawai, Toshio, Satria, Fayakun (2015): Species of the anglerfish genus Chaunax from Indonesia, with descriptions of two new species (Lophiiformes: Chaunacidae). Raffles Bulletin of Zoology 63: 301-308, DOI: http://doi.org/10.5281/zenodo.4502357
DOI: 10.5281/zenodo.4776010
title: Enhancing bioreactor arrays for automated measurements and reactive control with ReacSight

description: This dataset supports the paper <em>"</em>Enhancing bioreactor arrays for automated measurements and reactive control with ReacSight" (2021). ReacSight is a generic and flexible strategy to enhance bioreactor arrays for automated measurements and reactive experiment control. We used ReacSight to assemble a platform for cytometry-based characterization and reactive optogenetic control of parallel yeast continuous cultures. Using a dedicated bioreactor array, we showcased its capabilities on three applications. First, we achieved parallel real-time control of gene expression with light in different bioreactors. Second, we explored the impact of nutrient scarcity on fitness and cellular stress using well-controlled, high-information content competition assays. Third, we exploited nutrient scarcity to achieve dynamic control over the composition of a two-strain consortium. This dataset contains all the corresponding raw data. Together with code available in the ReacSight git repository, it allows to reproduce the analysis of raw data and the generation of figures appearing in the paper.
DOI: 10.6084/m9.figshare.14471628.v1
title: Additional file 2 of Chloroplast phylogenomic insights into the evolution of Distylium (Hamamelidaceae)

description: Additional file 2: Table S2. More detail of SSRs in Distylium species.
DOI: 10.6084/m9.figshare.14471550
title: Additional file 5 of Optimization of SPME–GC–MS and characterization of floral scents from Aquilegia japonica and A. amurensis flowers

description: Additional file 5: Table S4. All data generated or analyzed during this study.
DOI: 10.6084/m9.figshare.14471541.v1
title: Additional file 2 of Optimization of SPME–GC–MS and characterization of floral scents from Aquilegia japonica and A. amurensis flowers

description: Additional file 2: Table S1. Comparison of three SPME fibers for the extraction of volatile compounds identified in the flowers of A. amurensis. The character 0, 1, 2, 3 represents the number of times the VOCs have been detected.
DOI: 10.6084/m9.figshare.14471631
title: Additional file 3 of Chloroplast phylogenomic insights into the evolution of Distylium (Hamamelidaceae)

description: Additional file 3: Table S3. The primers used for amplification the variable markers.
DOI: 10.6084/m9.figshare.7131671
title: Effects of Rosuvastatin on Apolipoprotein J in Balloon-Injured Carotid Artery in Rats

description: Abstract Background: Restenosis after percutaneous coronary intervention in coronary heart disease remains an unsolved problem. Clusterin (CLU) (or Apolipoprotein [Apo] J) levels have been reported to be elevated during the progression of postangioplasty restenosis and atherosclerosis. However, its role in neointimal hyperplasia is still controversial. Objective: To elucidate the role Apo J in neointimal hyperplasia in a rat carotid artery model in vivo with or without rosuvastatin administration. Methods: Male Wistar rats were randomly divided into three groups: the control group (n = 20), the model group (n = 20) and the statin intervention group (n = 32). The rats in the intervention group were given 10mg /kg dose of rosuvastatin. A 2F Fogarty catheter was introduced to induce vascular injury. Neointima formation was analyzed 1, 2, 3 and 4 weeks after balloon injury. The level of Apo J was measured by real-time PCR, immunohistochemistry and western blotting. Results: Intimal/medial area ratio (intimal/medial, I/M) was increased after balloon-injury and reached the maximum value at 4weeks in the model group; I/M was slightly increased at 2 weeks and stopped increasing after rosuvastatin administration. The mRNA and protein levels of Apo J in carotid arteries were significantly upregulated after rosuvastatin administration as compared with the model group, and reached maximum values at 2 weeks, which was earlier than in the model group (3 weeks). Conclusion: Apo J served as an acute phase reactant after balloon injury in rat carotid arteries. Rosuvastatin may reduce the neointima formation through up-regulation of Apo J. Our results suggest that Apo J exerts a protective role in the restenosis after balloon-injury in rats.
DOI: 10.6084/m9.figshare.7131671.v1
title: Effects of Rosuvastatin on Apolipoprotein J in Balloon-Injured Carotid Artery in Rats

description: Abstract Background: Restenosis after percutaneous coronary intervention in coronary heart disease remains an unsolved problem. Clusterin (CLU) (or Apolipoprotein [Apo] J) levels have been reported to be elevated during the progression of postangioplasty restenosis and atherosclerosis. However, its role in neointimal hyperplasia is still controversial. Objective: To elucidate the role Apo J in neointimal hyperplasia in a rat carotid artery model in vivo with or without rosuvastatin administration. Methods: Male Wistar rats were randomly divided into three groups: the control group (n = 20), the model group (n = 20) and the statin intervention group (n = 32). The rats in the intervention group were given 10mg /kg dose of rosuvastatin. A 2F Fogarty catheter was introduced to induce vascular injury. Neointima formation was analyzed 1, 2, 3 and 4 weeks after balloon injury. The level of Apo J was measured by real-time PCR, immunohistochemistry and western blotting. Results: Intimal/medial area ratio (intimal/medial, I/M) was increased after balloon-injury and reached the maximum value at 4weeks in the model group; I/M was slightly increased at 2 weeks and stopped increasing after rosuvastatin administration. The mRNA and protein levels of Apo J in carotid arteries were significantly upregulated after rosuvastatin administration as compared with the model group, and reached maximum values at 2 weeks, which was earlier than in the model group (3 weeks). Conclusion: Apo J served as an acute phase reactant after balloon injury in rat carotid arteries. Rosuvastatin may reduce the neointima formation through up-regulation of Apo J. Our results suggest that Apo J exerts a protective role in the restenosis after balloon-injury in rats.
DOI: 10.6084/m9.figshare.9229166
title: R code for provincial population projection and distribution

description: R code used for provincial population projection for China, and the subsequent downscaling process for population gridmaps.
DOI: 10.6084/m9.figshare.9229169.v1
title: Projected provincial population for China

description: Projected provincial population by age, sex and educational attainment for China under SSPs from 2010 to 2100
DOI: 10.5281/zenodo.10670872
title: "Molecular beam laser spectroscopic studies of the photoactive properties of resveratrol" dataset
DOI: 10.5281/zenodo.10670873
title: "Molecular beam laser spectroscopic studies of the photoactive properties of resveratrol" dataset