cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5816715
title: MOESM1 of Use of DAVID algorithms for clustering custom annotated gene lists in a non-model organism, rainbow trout

description: Additional file 1. R_script for clustering.
DOI: 10.6084/m9.figshare.5816715.v1
title: MOESM1 of Use of DAVID algorithms for clustering custom annotated gene lists in a non-model organism, rainbow trout

description: Additional file 1. R_script for clustering.
DOI: 10.6084/m9.figshare.5816712
title: MOESM1 of Plasmodium falciparum genetic variation of var2csa in the Democratic Republic of the Congo

description: Additional file 1. Details of systematic literature search in PubMed and Web of Science, including full search terms and details of all studies identified.
DOI: 10.6084/m9.figshare.5816712.v1
title: MOESM1 of Plasmodium falciparum genetic variation of var2csa in the Democratic Republic of the Congo

description: Additional file 1. Details of systematic literature search in PubMed and Web of Science, including full search terms and details of all studies identified.
DOI: 10.6084/m9.figshare.5816679
title: Additional file 1: Figure S1. of Management breaks the natural productivity-biodiversity relationship in forests and grassland: an opinion

description: Distribution of areas with plant species diversity &gt;â 2500/pixel, matching the global diversity hotspots. Figure S2. Volume growth versus tree diversity on 1Â ha plots of Fagus sylvatica in Thuringia, Germany (Schall et al. 2017). Figure S3. Full dataset of the Liang et al. (2016) database of productivity (P) and tree species richness (S), and the extracted productivity/diversity relationship. The very large values of P indicate that these data may be stand volumes rather than growth rates. The analysis of Liang et al. is driven by a very large number of plots of low productivity at low diversity. (ZIP 667Â kb)
DOI: 10.6084/m9.figshare.5816679.v1
title: Additional file 1: Figure S1. of Management breaks the natural productivity-biodiversity relationship in forests and grassland: an opinion

description: Distribution of areas with plant species diversity &gt;â 2500/pixel, matching the global diversity hotspots. Figure S2. Volume growth versus tree diversity on 1Â ha plots of Fagus sylvatica in Thuringia, Germany (Schall et al. 2017). Figure S3. Full dataset of the Liang et al. (2016) database of productivity (P) and tree species richness (S), and the extracted productivity/diversity relationship. The very large values of P indicate that these data may be stand volumes rather than growth rates. The analysis of Liang et al. is driven by a very large number of plots of low productivity at low diversity. (ZIP 667Â kb)
DOI: 10.6084/m9.figshare.5816664
title: Provenance of Permian Delaware Mountain Group, central and southern Delaware Basin, and implications of sediment dispersal pathway near the southwestern terminus of Pangea

description: The Delaware Basin is located near the southwestern end of the Alleghanian–Ouachita–Marathon orogenic belt. The basin is mostly filled by Permian clastic rocks of the Delaware Mountain Group with ramp- to shelf-carbonate rimming basin edges. The Delaware Mountain Group has been well-documented as a deep-water clastic reservoir unit in the prolific Permian Basin, but its sources and related sediment dispersal pathways remain inconclusive. In this study, a total of 55 samples of the Delaware Mountain Group were collected from whole core and sidewall core from the central and southern Delaware Basin, and sandstone modal analyses and U-Pb detrital zircon geochronology were applied to constrain their potential sources. Sandstone modal analyses show that the majority of samples fall within the transitional continental source field. Age spectra of detrital zircon from five selected samples include a prominent middle Palaeozoic age cluster (~490–275 Ma), a major Neoproterozoic to early Palaeozoic age cluster (~790–510 Ma), and a series of minor age clusters of the middle to late Mesoproterozoic (~1300–920 Ma), early Mesoproterozoic (~1600–1300 Ma), late Palaeoproterozoic (~1825–1600 Ma), and Archaean and Palaeoproterozoic (&gt; ~1825 Ma). Integrating detrital zircon data from all potential sources and coeval sandstones from the northern Delaware Basin suggests that the majority of sediment was derived from the Appalachian foreland, the Ouachita orogenic system, and the peri-Gondwanan terranes. Variation in the abundance of the different age groups reveals a provenance shift between deposition of the Brushy Canyon Formation and the Cherry and Bell Canyon Formations. To accommodate the composition, and the stratigraphic and spatial age spectral variations, we proposed that the sediment dispersal pathway includes a transcontinental fluvial system from the Appalachian orogenic belt to the east, a regional scale fluvial system from the Ouachita orogenic belt to the north and northeast, and a local, proximal fluvial system from the peri-Gondwanan terranes to the south and southeast.
DOI: 10.6084/m9.figshare.5816664.v2
title: Provenance of Permian Delaware Mountain Group, central and southern Delaware Basin, and implications of sediment dispersal pathway near the southwestern terminus of Pangea

description: The Delaware Basin is located near the southwestern end of the Alleghanian–Ouachita–Marathon orogenic belt. The basin is mostly filled by Permian clastic rocks of the Delaware Mountain Group with ramp- to shelf-carbonate rimming basin edges. The Delaware Mountain Group has been well-documented as a deep-water clastic reservoir unit in the prolific Permian Basin, but its sources and related sediment dispersal pathways remain inconclusive. In this study, a total of 55 samples of the Delaware Mountain Group were collected from whole core and sidewall core from the central and southern Delaware Basin, and sandstone modal analyses and U-Pb detrital zircon geochronology were applied to constrain their potential sources. Sandstone modal analyses show that the majority of samples fall within the transitional continental source field. Age spectra of detrital zircon from five selected samples include a prominent middle Palaeozoic age cluster (~490–275 Ma), a major Neoproterozoic to early Palaeozoic age cluster (~790–510 Ma), and a series of minor age clusters of the middle to late Mesoproterozoic (~1300–920 Ma), early Mesoproterozoic (~1600–1300 Ma), late Palaeoproterozoic (~1825–1600 Ma), and Archaean and Palaeoproterozoic (&gt; ~1825 Ma). Integrating detrital zircon data from all potential sources and coeval sandstones from the northern Delaware Basin suggests that the majority of sediment was derived from the Appalachian foreland, the Ouachita orogenic system, and the peri-Gondwanan terranes. Variation in the abundance of the different age groups reveals a provenance shift between deposition of the Brushy Canyon Formation and the Cherry and Bell Canyon Formations. To accommodate the composition, and the stratigraphic and spatial age spectral variations, we proposed that the sediment dispersal pathway includes a transcontinental fluvial system from the Appalachian orogenic belt to the east, a regional scale fluvial system from the Ouachita orogenic belt to the north and northeast, and a local, proximal fluvial system from the peri-Gondwanan terranes to the south and southeast.
DOI: 10.6084/m9.figshare.5816658
title: Characteristics and genesis of diachronous Carboniferous volcano-sedimentary sequences: insights from geochemistry, petrology and U–Pb dating in the North Junggar basin, China

description: The subduction of oceanic lithosphere during the Carboniferous Period contributed to the formation of widely distributed subduction-related volcanic rocks within the Junggar basin. These volcanic rock associations contain significant clues for understanding the subduction of the Keramaili oceanic lithosphere and the filling of the remnant oceanic basin. Here, we report regional gravity and magnetic data, petrology, geochemistry, and U–Pb dating for Carboniferous volcanic rocks from the North Junggar basin (NJB). Using samples from well Y-1, we distinguish upper and lower volcanic sequences on the basis of selected geochemical data. An isochronous stratigraphic framework of Carboniferous volcano-sedimentary sequences is then constructed and the petrogenesis of these volcanic rocks is discussed. Finally, we propose an explanation for the genesis of these diachronous Carboniferous volcano-sedimentary sequences. The results show that various volcanic rocks are distributed in different areas of the NJB, and mainly consist of calc-alkaline basalt–andesite–dacite assemblages and alkaline basalt–basaltic andesite–andesite assemblages. The geochemical data also demonstrate a binary nature of the Carboniferous volcanic rocks. In the eastern NJB, the lower and upper volcanic sequences are formed during the early and late Carboniferous, respectively. However, all of these volcano-related sequences in the western of the NJB are formed during the late Carboniferous. These volcano-sedimentary sequences exhibit a ‘ladder-style’ of temporospatial evolution from east to west. The geochemical results also indicate that the upper volcanic rocks include island arc components formed in an extensional setting, whereas the lower volcanic rocks were derived from deep crustal cycling metasomatism by various mantle components in a continental arc environment. Earlier closure of the Keramaili oceanic basin and slab roll-back of the Junggar oceanic lithosphere in eastern <i>versus</i> western Junggar basin led to the formation of these diachronous volcano-sedimentary sequences.
DOI: 10.6084/m9.figshare.5816658.v1
title: Characteristics and genesis of diachronous Carboniferous volcano-sedimentary sequences: insights from geochemistry, petrology and U–Pb dating in the North Junggar basin, China

description: The subduction of oceanic lithosphere during the Carboniferous Period contributed to the formation of widely distributed subduction-related volcanic rocks within the Junggar basin. These volcanic rock associations contain significant clues for understanding the subduction of the Keramaili oceanic lithosphere and the filling of the remnant oceanic basin. Here, we report regional gravity and magnetic data, petrology, geochemistry, and U–Pb dating for Carboniferous volcanic rocks from the North Junggar basin (NJB). Using samples from well Y-1, we distinguish upper and lower volcanic sequences on the basis of selected geochemical data. An isochronous stratigraphic framework of Carboniferous volcano-sedimentary sequences is then constructed and the petrogenesis of these volcanic rocks is discussed. Finally, we propose an explanation for the genesis of these diachronous Carboniferous volcano-sedimentary sequences. The results show that various volcanic rocks are distributed in different areas of the NJB, and mainly consist of calc-alkaline basalt–andesite–dacite assemblages and alkaline basalt–basaltic andesite–andesite assemblages. The geochemical data also demonstrate a binary nature of the Carboniferous volcanic rocks. In the eastern NJB, the lower and upper volcanic sequences are formed during the early and late Carboniferous, respectively. However, all of these volcano-related sequences in the western of the NJB are formed during the late Carboniferous. These volcano-sedimentary sequences exhibit a ‘ladder-style’ of temporospatial evolution from east to west. The geochemical results also indicate that the upper volcanic rocks include island arc components formed in an extensional setting, whereas the lower volcanic rocks were derived from deep crustal cycling metasomatism by various mantle components in a continental arc environment. Earlier closure of the Keramaili oceanic basin and slab roll-back of the Junggar oceanic lithosphere in eastern <i>versus</i> western Junggar basin led to the formation of these diachronous volcano-sedimentary sequences.
DOI: 10.6084/m9.figshare.5816649
title: Raw data Larval density.jpg

description: Raw values of DOI: 10.6084/m9.figshare.5807508.v1.
DOI: 10.6084/m9.figshare.5816643
title: Raw data Larval mortality.jpg

description: Raw values (numbers of survivors) of DOI: 10.6084/m9.figshare.5808279.v1.
DOI: 10.6084/m9.figshare.5816643.v1
title: Raw data Larval mortality.jpg

description: Raw values (numbers of survivors) of DOI: 10.6084/m9.figshare.5808279.v1.
DOI: 10.6084/m9.figshare.5816628
title: Comparison of bioinformatics workflows (Item P)

description: Comparison of the performance of the Kraken+Bracken workflow described in Kirstahler <i>et al</i>. 2018, with 12 metagenomic classifiers using a synthetic mock community, as described in Peabody <i>et al.</i>, 2015. <br>Examination of the MetaSimHC250 dataset containing simulated reads from 11 microorganisms with a read length of 250 bp (Peabody <i>et al</i>., 2015). The values obtained using our Kraken+Bracken workflow (see Fig. 2 in Kirstahler <i>et al</i>., 2018) are compared with the values obtained by Peabody <i>et al</i>., 2015.<br>A) The proportion of assigned reads after classification. Kraken+Bracken performance is similar to Kraken.<br>B) Calculated sensitivity for tested methods on each individual species in the synthetic mock community. Our workflow shows comparable performance to the other Kraken results.<br>C) Calculated precision for tested methods on each individual species in the synthetic mock community. Kraken-based methods show high similarities.<br>D) Bracken results for MetaSimHC250 dataset with calculated sensitivity and precision for the classification of the Kraken+Bracken workflow.<br><br><b>Reference</b> <b>Kirstahler P, Bjerrum SS, Friis-Møller A, </b><b>la Cour M, Aarestrup FM, Westh H., and Pamp SJ. (2018) </b>Genomics-Based Identification of Microorganisms in Human Ocular Body Fluid.<b> </b> <b>Scientific Reports</b>, doi:10.1038/s41598-018-22416-4.
DOI: 10.6084/m9.figshare.5816628.v1
title: Comparison of bioinformatics workflows (Item P)

description: Comparison of the performance of the Kraken+Bracken workflow described in Kirstahler <i>et al</i>. 2018, with 12 metagenomic classifiers using a synthetic mock community, as described in Peabody <i>et al.</i>, 2015. <br>Examination of the MetaSimHC250 dataset containing simulated reads from 11 microorganisms with a read length of 250 bp (Peabody <i>et al</i>., 2015). The values obtained using our Kraken+Bracken workflow (see Fig. 2 in Kirstahler <i>et al</i>., 2018) are compared with the values obtained by Peabody <i>et al</i>., 2015.<br>A) The proportion of assigned reads after classification. Kraken+Bracken performance is similar to Kraken.<br>B) Calculated sensitivity for tested methods on each individual species in the synthetic mock community. Our workflow shows comparable performance to the other Kraken results.<br>C) Calculated precision for tested methods on each individual species in the synthetic mock community. Kraken-based methods show high similarities.<br>D) Bracken results for MetaSimHC250 dataset with calculated sensitivity and precision for the classification of the Kraken+Bracken workflow.<br><br><b>Reference</b> <b>Kirstahler P, Bjerrum SS, Friis-Møller A, </b><b>la Cour M, Aarestrup FM, Westh H., and Pamp SJ. (2018) </b>Genomics-Based Identification of Microorganisms in Human Ocular Body Fluid.<b> </b> <b>Scientific Reports</b>, doi:10.1038/s41598-018-22416-4.
DOI: 10.6084/m9.figshare.5816574
title: Confluência do Capital Social, Empoderamento e Governança Ambiental na Sadia Qualidade de Vida em Comunidades Rurais no Ceará

description: Abstract: The understanding of how social capital, empowerment and environmental governance relate in the local level can strengthen the role of public power and private institutions in implementing strategies to promote quality of life. In this perspective the objective of this study is to analyse the confluence of social capital, empowerment and environmental governance for the healthy quality of life in rural communities in Ceará, Brazil. For this, primary data obtained from community representatives were used. The operationalization of the analysed concepts was accomplished through the construction of aggregate indexes. As the main method of analysis, a structural equation model was estimated. The most relevant results showed that social capital and empowerment are related to each other in promoting healthy quality of life in the communities studied, while environmental governance cannot promote change in this sense. The importance of community participation in development / involvement was evident, thus improving access to social rights with responsible and supportive participation in order to achieve the healthy quality of life in an ecologically balanced environment for present and future generations.
DOI: 10.6084/m9.figshare.5816574.v1
title: Confluência do Capital Social, Empoderamento e Governança Ambiental na Sadia Qualidade de Vida em Comunidades Rurais no Ceará

description: Abstract: The understanding of how social capital, empowerment and environmental governance relate in the local level can strengthen the role of public power and private institutions in implementing strategies to promote quality of life. In this perspective the objective of this study is to analyse the confluence of social capital, empowerment and environmental governance for the healthy quality of life in rural communities in Ceará, Brazil. For this, primary data obtained from community representatives were used. The operationalization of the analysed concepts was accomplished through the construction of aggregate indexes. As the main method of analysis, a structural equation model was estimated. The most relevant results showed that social capital and empowerment are related to each other in promoting healthy quality of life in the communities studied, while environmental governance cannot promote change in this sense. The importance of community participation in development / involvement was evident, thus improving access to social rights with responsible and supportive participation in order to achieve the healthy quality of life in an ecologically balanced environment for present and future generations.
DOI: 10.6084/m9.figshare.5816571
title: Pork barrel efficacy: the importance of budgetary amendments and allied mayors in the election of deputies

description: Abstract There is little consensus among empirical studies regarding the electoral effect of individual budget amendments. The present article addresses this question by using regressions with panel data to study how a deputy's amendments affect his performance in the race for re-election. In addition, a regression discontinuity is estimated to assess how the mayor's party affects the proposition and execution of the budget amendments. The results show that only amendments made as transfers to mayoral administrations generate votes, especially when the mayor belongs to the party of the legislator. In addition, a larger volume of amendments is proposed and implemented in the municipalities.
DOI: 10.6084/m9.figshare.5816571.v1
title: Pork barrel efficacy: the importance of budgetary amendments and allied mayors in the election of deputies

description: Abstract There is little consensus among empirical studies regarding the electoral effect of individual budget amendments. The present article addresses this question by using regressions with panel data to study how a deputy's amendments affect his performance in the race for re-election. In addition, a regression discontinuity is estimated to assess how the mayor's party affects the proposition and execution of the budget amendments. The results show that only amendments made as transfers to mayoral administrations generate votes, especially when the mayor belongs to the party of the legislator. In addition, a larger volume of amendments is proposed and implemented in the municipalities.
DOI: 10.6084/m9.figshare.5816565
title: Accessibility, Gender and Higher Education: Indicators from Scientific Research

description: ABSTRACT This article aims to present a literature review of texts that articulate accessibility, gender and higher education published from 2013 to the current period. To place the object of study within the wide dissemination of scientific works, researchers must choose a method that includes information relevant to the research problem. This phase of the investigation, therefore, involves the choice of criteria for search management and procedures for comparing, categorizing and analyzing publications among themselves and with the research to be developed. In this context, the purpose of this text is to disseminate an alternative to literature review design made from the categorization and analysis carried out through NVivo 11 Program and the detailed reading of 72 papers developed in Brazil, Spain, Colombia, Chile, Mexico and Canada. With the search software, the identification of the most frequent words allowed the elaboration of a conceptual mosaic that guided a discussion of the present research. However, the words lacking in the search procedure, but important for the development of the thesis - such as gender, feminism and woman - reveal the need to introduce these terms into an investigative work. The result of this literature review shows that the study on accessibility in higher education is developed predominantly by women and that the multidimensionality of the meaning of accessibility causes researchers to seek answers in other fields of knowledge, thus escaping the limits of the hyper-specialization of Special Education. This aspect can contribute to innovation and advancement of knowledge in focus.
DOI: 10.6084/m9.figshare.5816565.v1
title: Accessibility, Gender and Higher Education: Indicators from Scientific Research

description: ABSTRACT This article aims to present a literature review of texts that articulate accessibility, gender and higher education published from 2013 to the current period. To place the object of study within the wide dissemination of scientific works, researchers must choose a method that includes information relevant to the research problem. This phase of the investigation, therefore, involves the choice of criteria for search management and procedures for comparing, categorizing and analyzing publications among themselves and with the research to be developed. In this context, the purpose of this text is to disseminate an alternative to literature review design made from the categorization and analysis carried out through NVivo 11 Program and the detailed reading of 72 papers developed in Brazil, Spain, Colombia, Chile, Mexico and Canada. With the search software, the identification of the most frequent words allowed the elaboration of a conceptual mosaic that guided a discussion of the present research. However, the words lacking in the search procedure, but important for the development of the thesis - such as gender, feminism and woman - reveal the need to introduce these terms into an investigative work. The result of this literature review shows that the study on accessibility in higher education is developed predominantly by women and that the multidimensionality of the meaning of accessibility causes researchers to seek answers in other fields of knowledge, thus escaping the limits of the hyper-specialization of Special Education. This aspect can contribute to innovation and advancement of knowledge in focus.