cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57745/pqtfry
title: Replicate data for "Impact of chelation on reactivity and cytotoxicity of hemilabile biphenyl gold(III) N-heterocyclic carbene complexes"

description: This dataset is associated with a publication, and contains the NMR pulse program used for the cpmg-esgp1d experiment allowing solvent suppresion (through excitation sculpting) and T2-filtering (through Hahn echo), the python fitting program used to plot dose-response curves and to extract the EC50 values after fitting the data with a 4-parameter sigmoid and the videos and raw images resultng from the videomicroscopy experiments. The data is sorted in three folders containing an additional README.md file which includes useful information about the corresponding files.
DOI: 10.57745/pur7ml
title: Rapport de synthèse sur les projections climatiques régionalisées

description: Ce deuxième rapport sur le climat vise à préciser les évolutions climatiques projetées par l’ensemble Explore2, caractériser les incertitudes et proposer des modes d’exploration de ces données. Dans un premier temps, les simulations individuelles sélectionnées à partir de l’ensemble EURO-CORDEX et corrigées par les méthodes ADAMONT et CDF-t sont évaluées selon des critères de changement en température et précipitation sur la France par rapport à l’ensemble CMIP6 complet au pas de temps saisonnier (hiver et été). La comparaison réalisée sur le scénario RCP8.5 à l’horizon fin de siècle met en évidence la concordance globale de ces simulations à l’exception de deux simulations hors de la dispersion CMIP6 en été (à la fois en température et précipitation). Le projet a décidé de rejeter ces deux simulations de l’ensemble final afin de pouvoir garantir une cohérence avec les changements proposés par CMIP6 sur la France. Une sélection de 17 couples GCM/RCM compose finalement l’ensemble baptisé « Explore2-2024 » dont les simulations (10 sous RCP2.6, 9 sous RCP4.5 et 17 sous RCP8.5) seront corrigées par les méthodes ADAMONT et CDF-t. Au-delà d'une caractérisation statistique des propriétés de l'ensemble Explore2-2024, un travail a également été mené pour identifier des simulations particulières proposant des futurs climatiques contrastés sur la France. Cette approche narrative ou « storyline » en anglais a conduit à sélectionner de manière experte quatre simulations pour leurs impacts attendus sur l’hydrologie. Il est à noter que cette sélection a aussi été comparée aux résultats d’une approche objective par classification hiérarchique ascendante (fournie en Annexe 1). Une grande partie de ce livrable est consacrée à l’analyse des évolutions climatiques proposées par l’ensemble Explore2-2024 à partir d’une liste synthétique d’indicateurs climatiques d’intérêt pour l’hydrologie. Les incertitudes sur les changements projetés sont évaluées selon des critères de robustesse pour chaque simulation et d’accord de signe pour l’ensemble. Pour chaque indicateur, des cartes des paramètres de distribution (médiane, min et max) sont fournies en identifiant pour chaque maille les simulations de l’ensemble portant ce signal. Les figures et tableaux de valeur (pour les changements France entière, moitié Nord, moitié Sud) sont aussi complétés par des commentaires donnant les messages clé sur les évolutions attendues. Un chapitre spécifique est proposé pour l’analyse des quatre narratifs sélectionnés par le projet avec des visualisations synthétiques, mettant en avant la variabilité inter annuelle en complément des moyennes par horizon. L’ensemble des ressources graphiques est produit sur les simulations corrigées par les deux méthodes ADAMONT et CDF-t, avec une analyse des écarts par indicateur réalisée séparément sur les deux jeux de données (fournis en Annexe 2).
DOI: 10.57745/mka5yj
title: Point Cloud Data for Silicone Liquid Deposition Modeling

description: This dataset contains a set of point clouds acquired on parts produced using silicone liquid deposition modelling. These point clouds reflect the layer-by-layer evolution of the parts produced. A total of eleven parts were produced on four printing plates. Silicone printing by liquid deposition modelling is sensitive to a number of faults, including: incorrect adjustment of the extrusion flow rate, part geometry, interaction between the extrusion nozzle and the printed part, and occlusion of internal structures. Each printing palte contains parts enabling the manufacturing process to be tested against a defect that could lead to part destruction or manufacturing inaccuracies. This dataset was used to put forward a method for monitoring silicone printing through indicators based on the segmentation and measurement of metrics on these point clouds. This dataset is offered to the community so that others can analyze the results of monitoring by other methods on these data acquired on real parts. Details are provided in the file README.md
DOI: 10.57745/oj07sn
title: Merlot Genome Assembly

description: Assembly of Merlot PacBio Hifi reads using hifiasm 0.13 software with the trio binning option. The reads are stored at ENA here: https://www.ebi.ac.uk/ena/browser/view/PRJEB59893 The run ERR10930361 is PacBio Hifi reads from the Merlot mother Magdeleine noire des Charentes The run ERR10930362 is PacBio Hifi reads from the Merlot father Cabernet franc The run ERR10930363 is PacBio Hifi reads from Merlot leaves The run ERR10930364 is PacBio Hifi reads from Merlot roots
DOI: 10.57745/oj9fiy
title: An experimental and modeling investigation of the combustion of anisole and guaiacol

description: Anisole and guaiacol are both used as surrogates for lignin-derived biofuel. However, while the oxidation reaction mechanisms of anisole can be validated against a large set of experimental data, experimental measurements and models for guaiacol are limited. In this context, in addition to measuring adiabatic laminar burning velocities of both fuels using a flat flame burner, the oxidation of guaiacol was investigated at temperatures between 600 and 925 K. A near-atmospheric pressure jet–stirred reactor was used for three equivalence ratios (0.5, 1 and 2) with a high helium dilution. The experiments yielded mole fractions of 22 reaction products, among which two new species, benzodioxole and benzodioxole-2-one, were identified. All the measurements made in this work, along with extensive literature data on anisole, were compared with the predictions of a newly developed kinetic model. A good agreement was found between kinetic modeling and experiments, showing improved prediction for some species relative to the existing literature guaiacol oxidation models. Flowrate analyses are also discussed both in flames and in the jet-stirred reactor, especially focusing on the formation of the newly detected products.
DOI: 10.57745/pettgy
title: Genotyping and phenotyping data for an hybid grapevine progeny that includes disease resistance genes

description: This dataset was used during the PhD Thesis of Elsa Chedid
DOI: 10.57745/pmd42j
title: Séquences de culture, France, 2015-2021

description: Ce jeux de données regroupe les séquences de cultures à partir du RPG public (source IGN) pour la période 2015-2021. Les données ont été produites avec le logiciel RPG Explorer. Pour plus de renseignement sur le logiciel ou l'usage de ces données, vous pouvez contacter l'équipe RPG Explorer (rpg-explorer@inrae.fr) Les données sont fournies par département et au format Geopackage. Celles-ci peuvent être ouverte avec le logiciel libre QGIS. id_unique : Concaténation des différents identifiants RPG des parcelles. Les identifiants apparaissent de l'année la plus récente à l'année la plus ancienne et sont séparés par un "_". qualif_seq : Il s'agit de la qualité de la séquence. Si la valeur est de 1, alors la séquences est correctement reconnue. Si la valeur est de 8 alors il s'agit d'une séquence non réconnue (en l'occurence des séquences avec uniquement une culture sur l'ensemble de la période). seq_surf : Surface en hectare de la parcelle de filiation. seq_c311_YYYY : Code culture RPG à 3 caractères de la parcelle de filiation pour l'année YYYY. Le référentiel des cultures RPG est disponible ici . idilotYYYY : Identifiant de la parcelle du RPG présente dans la parcelle de filiation en année N. Attention, le terme ilot désigne l'identifiant parcelle du RPG public (source IGN) et non pas l'ilot.
DOI: 10.57745/psk04g
title: RPG complété 2021 Région Pays de la Loire

description: RPG complété 2021. Complète le RPG campagne 2021 pour les départements de la région Pays de la Loire (44, 49, 53, 72, 85). (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2023.
DOI: 10.57745/ralp5g
title: Land Supply Risk

description: Land Supply Risk index and data sources used to compute them. The Land Supply Risk are based on the criticality methods of the Yale University and the Joint Research Centre of the European Commission. The index allows to quantify and compare the accessibility of land between countries.
DOI: 10.57745/ry0u0j
title: Characterization of the microstructure of IN718 thin walls produced by the WLAM additive manufacturing process with and without active cooling

description: The dataset includes the manufacturing parameters used to produce two IN718 thin walls by wire laser additive manufacturing (DED-LB-W) with a coaxial head and the results of the EBSD performed in a vertical slice of each wall. Each wall was built with a unidirectional laser path. The first with active cooling of the nozzle shielding gas during the return trajectory, the second without active cooling. The electron back-scatter diffraction (EBSD) analysis made with a FEI Quanta 600 FEG-ESEM Scanning Electron Microscope.
DOI: 10.57745/rzobcy
title: Leaf phenology of sessile oak (Quercus petraea) and Seasonal variations in the fraction of light intercepted by the tree crowns

description: The dataset results from a 10-year experiment conducted on sessile oak (Quercus petraea) both in a provenance plantation (Sillegny, NE France) and in a network of mature stands along a wide altitudinal gradient (Pyrénées, SW France). The aim was to assess the use of seasonal variations in the fraction of light intercepted by the tree canopy to (1) date the successive events of leafing in spring and leaf senescence in autumn, and (2) monitor environmental gradients in leaf phenology, such as those induced by altitude. The fraction of radiation intercepted (FiR) by the canopy of each studied tree population was estimated from continuous measurements of the radiation transmitted through the tree crowns and the radiation incident above the canopy. This was done in the wavelengths of photosynthetically active radiation (PAR) and in the blue and green spectral bands using two types of sensors, quantum sensors and photodiodes, respectively. In a given spectral band, FiR =1- Transmittance, where Transmittance= transmitted radiation / incident radiation. The time series of FiR have been produced with a daily frequency year by year. The dataset includes all the time series produced, from the raw measurements to the annual series of daily FiR. Temporal variations in FiR were smoothed to different degrees to best capture seasonal transitions using several models: non-parametric smoothers (Spline, Whittaker) and a parametric model (Gompertz). Metrics were extracted that systematically date variations in the modelled annual trajectory during leafing and senescence. The dataset includes the metrics produced for each model for each population, year by year. The metrics were evaluated by comparing them with visual phenological observations in the field, pooled by population. These data are also included.
DOI: 10.57745/nztmn9
title: Données de réplication pour : Rituals of Reasons: A Choice-Based Approach to the Acceptability of Lotteries in Allocation Problems

description: This repository contains the experimental instructions, the data collected and the code processing for the research paper Rituals of Reason: A Choice-Based Approach to the Acceptability of Lotteries in Allocation Problems (previously circulated as The Acceptability of Lotteries in Allocation Problems: A Choice-Based Approach).
DOI: 10.57745/ppjrok
title: DMP - data management plan - WAIT4 project

description: Data Management Plan of the research projet WAIT 4 - initial version Plan de Gestion de Données (PGD) du projet WAIT4 - version initiale
DOI: 10.57745/qoqfpn
title: BioAGgressor Ontology

description: This ontology was build during the D2KAB project. The goal is to model all the living organisms involved in cultivated plant disease appearance. The ontology and its documentation represent the point of view of some french researchers from differents institutions.
DOI: 10.57745/qqruyx
title: Données de collecte des réponses à un sondage sur l'éthique de l'usage des données personnelles

description: Ces données ont été collectées lors de sondages effectués entre 2019 et 2024 lors de présentations sur l'éthique de l'usage des données dans des conférences variées : événements professionnels, conférences grand public. Les participants devaient répondre à 3 questions. D'abord les deux questions : Q1 : « Est-il éthique de réutiliser des données personnelles à des finalités autres que celles prévues lors du recueil des données ? » Q2 : « Est-il légal de réutiliser des données personnelles à des finalités autres que celles prévues lors du recueil des données ? » Ensuite, des précisions juridiques étaient présentées et une présentation d'une problématique liée au besoin de réutilisation de données personnelles dans un cadre sceitnfique était exposée. Le contexte présenté est celui d'une étude sur le risque d'une consultation tardive pour un épistage du cancer du sein en fonction de la défavorisation sociale.  La troisième question était alors posée : « Est-il éthique de NE PAS utiliser des données existantes pour savoir si les femmes socialement défavorisées ont un risque accru de consulter tardivement ? »La collecte a été effectuée par des outils de vote en ligne de manière anonyme. Les résultats de chaque sondages sont donnés.
DOI: 10.57745/r6em40
title: Sustainability assessment of dairy production systems: Guide for the collection of farm environmental and economic data

description: This document is designed to guide the data collector when completing the MilKey data template at data collection, specifically for the environmental and economic parts. In addition to this introduction, the document is divided into six sections. The first four sections correspond to the first four parts of the MilKey template (i.e., Part I: General farm information and crop production, Part II: Dairy enterprise, Part III: Beef enterprise, and Part IV: Economic data). They define all variables to be recorded one by one. The last two sections provide additional information to fill out the template, notably regarding the pre-entered variable lists used throughout the MilKey template and guidelines to record labour inputs.
DOI: 10.57745/rfkkyx
title: Building changes on the french part of the functional urban area of Strasbourg between 2011 and 2021

description: This dataset represents changes in building derived from changes detected in topographic building data from BDTopo product on the french part of a 45mn isochrone area around Strasbourg city between 2011 and 2021 and is associated with a stylesheet so that it can be visualised through GIS software like QGIS or ArcGIS. The data on the german part of Strasbourg functional urban area have also been computed but cannot be shared under an open licence.
DOI: 10.57745/rz6njo
title: Douglas vert / Pseudotsuga menziesii

description: Fichier d'impression 3D d'anatomie du bois file for 3D printer : Wood anatomy
DOI: 10.57745/s2rtiv
title: RPG complété 2021 Région Corse

description: RPG complété 2021. Complète le RPG campagne 2021 pour les départements de la région Corse (2A, 2B). (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2023.
DOI: 10.57745/oxynkt
title: MassiveFold data for target T1295

description: MassiveFold data generated for CASP16, in collaboration with CAPRI . 4080 predictions were generated for the target = 510 x 8 sets of parameters. - a description of the setup can be found in `MassiveFold_CASP16_Abstract.pdf` - `README.txt` describes the contents of the main `MassiveFold.tar.gz` file - the main `MassiveFold.tar.gz file contains all the predictions, divided into 8 folders named after the conditions. It contains predictions as well as pickle files, sequence alignments, rankings and plots. The README.txt file describes the contents of this tar.gz. - the `only_pdbs_MassiveFold.tar.gz` is the result of the `gather_runs.py` script, without the pickle files. It contains a list of all the pdb files and ranking files with scores. - `gather_runs.py` allows to gather the runs, to use preferentially to the one included in the main `MassiveFold.tar.gz` at the time of the prediction phase, because it has been updated - `combined_scores.csv` file contains the CASP assessment for the target (from https://predictioncenter.org/)
DOI: 10.57745/qcxrsi
title: Elastic modelling of lattice distortions in concentrated random alloys

description: This dataset includes the numerical results discussed in the paper entitled "Elastic modelling of lattice distortions in concentrated random alloys" published in Acta Materialia 257 in September 2023 (https://doi.org/10.1016/j.actamat.2023.119117). These results are obtained from molecular statics calculations and all the details of these simulations (interatomic potentials, size of the system, minimization algorithm, etc.) are described in the associated article. The results are reported here as .csv files encoded in ASCII where the data is organized in columns separated by blank spaces. The first line of the files include a bried description of each column and a README.txt file associated to each folder include a more precise description of its content and of its relation with the article's figures.
DOI: 10.57745/qjhgm7
title: Replication data for : The Towers on the Roman Coptos-Myos Hormos Road in Egypt

description: The article linked with this data set explores the role and chronology of the dozens of towers built along the Roman Coptos-Myos Hormos road in Egypt, using visibility analysis. The study concludes that their primary role was to monitor traffic rather than to transmit messages across the desert, during the 2nd century CE. The present repository contains the geographical dataset and processing used to create the visibility network discussed in the article. The towers were identified and located based on the four maps produced by Meredith 1958, Prickett 1979, Zitterkopf and Sidebotham 1989 and Brun, et al. 2003. The locations were refined and improved by photointerpretation using satellite images from Microsoft® Bing™ Satellite, Google Earth Pro® (version 7.3.3.7786), Maxar Imagery and the Pleiades satellites (CNES, primary, natural colour pansharpened 50 cm, Airbus Defence and Space). Some identifications were supported by the consultation of the excavation reports available for certain areas. The visibility analyses were carried out with the intervisibility network and viewshed tools in the QGIS 3 Visibility analysis plugin (version 1.5, 2015, Zoran Čučković). The TanDEM-X 0.4 arcsec digital elevation model used was provided by the German Aerospace Center (©DLR 2019) but cannot be shared by us due to user policy.
DOI: 10.57745/rpdbi6
title: A dataset on the ingestive behaviour of grazing ruminants collated from the literature

description: This dataset contains data regarding a number of components of the ingestive behaviour of grazing ruminants, collated from 90 scientific publications. See associated data paper published in Data in Brief.
DOI: 10.15468/dl.jvmfue
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Poyntonophrynus fenoulheti (Hewitt & Methuen, 1912)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -23.2724,25.1306 -24.0715,25.5395 -24.0715,25.5395 -23.2724))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035116-250525065834625/datasets/export for details.
DOI: 10.57745/otcffo
title: Gene expressions in porcine adipose tissues and blood cells

description: Data used for the manuscript entitled "Hygiene of housing conditions and proinflammatory signals alter gene expressions in porcine adipose tissues and blood cells" Authors: Audrey Quéméner, Marie-Hélène Perruchot, Frédéric Dessauge, Annie Vincent, Elodie Merlot, Nathalie Le Floc’h, Isabelle Louveau
DOI: 10.57745/pi0n92
title: Species distribution estimated from four Species Distribution Models (SDM) database, with their trophic levels informations

description: We identified a species list with occurrence records that included bivalves, cephalopods, crabs, and fish taxas. Occurrence records were collected from the publicly accessible databases: OBIS (www.iobis.org), the Intergovernmental Oceanographic Commission (ioc-unesco.org), GBIF (www.gbif.org), Fishbase (www.fishbase.org), and the International Union for the Conservation of Nature (http://www.iucnredlist.org/technical-documents/spatial-data). We eliminated duplicates, points on land and points outside of the known species biome from the compiled species occurrence data set (Froese, R. & Pauly, 2018). We excluded species whose TLs were unknown based on data from (FishBase www.fishbase.org and SeaLifeBase https://www.sealifebase.ca). The data were then gridded into a raster of the global oceans (1° of longitude per 1° degree of latitude). The species with occurrence records in less than 30 cells were discarded from further analysis (Hernandez et al., 2006). Therefore, the final dataset includes 95 bivalves, 15 cephalopods, 122 crabs, and 5241 fish species. Second, we employed an ensemble species distribution modelling approach (Asch et al., 2018; Reygondeau, 2019) to quantify these species' spatial distribution. The dataset includes species name, average trophic level and spatial distribution according to species distribution models. The coordinates correspond to the centroid of each ocean spatial cell.
DOI: 10.57745/o1s5l1
title: In-depth characterization of 4 carbon nanomaterials (MWCNT, DWCNT, FLG, GNP) chemically modified by oxidation with an acidic mixture of H2SO4/HNO3

description: Double-walled carbon nanotubes (DWCNTs), multi-walled carbon nanotubes (MWCNTs), few-layer graphene (FLG) and graphene nanoplatelets (GNPs) were chemically modified by refluxing in an acidic mixture of H2SO4/HNO3 rigorously in the same way. The oxidized samples have been characterized by means of several complementary characterization techniques : transmission electron microscopy (TEM), Raman spectroscopy, X-ray photoelectron spectroscopy (XPS), Fourier-transform infrared spectroscopy (FTIR), thermogravimetric analysis (TGA) under air and TGA coupled with a mass spectrometry (TGA-MS) under He. The dataset provides morphological, structural and chemical characterizations of the four chemically treated carbon nanomaterials.