cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28916446
title: Additional file 4 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 4. Table S1. Related to Fig. 4A and 4B. Detailed Clinical information of 15 enrolled breast cancer patients.
DOI: 10.6084/m9.figshare.28916446.v1
title: Additional file 4 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 4. Table S1. Related to Fig. 4A and 4B. Detailed Clinical information of 15 enrolled breast cancer patients.
DOI: 10.6084/m9.figshare.28916449.v1
title: Additional file 5 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 5. Table S2. DNA finger printing analysis of 27 breast cancer in-vitro models.
DOI: 10.6084/m9.figshare.28916452.v1
title: Additional file 6 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 6. Table S3A. Related to Fig. S2. Representative mutations of 27 Breast Cancer Models. 3B. Related to Fig. S2. Confirmed pathogenicity using ClinVar database.
DOI: 10.6084/m9.figshare.28916449
title: Additional file 5 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 5. Table S2. DNA finger printing analysis of 27 breast cancer in-vitro models.
DOI: 10.6084/m9.figshare.28916452
title: Additional file 6 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 6. Table S3A. Related to Fig. S2. Representative mutations of 27 Breast Cancer Models. 3B. Related to Fig. S2. Confirmed pathogenicity using ClinVar database.
DOI: 10.6084/m9.figshare.28916455
title: Additional file 7 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 7. Table S4A. Related to Fig. 2A. Cluster identification of multiple set 1. 4B. Related to Fig. 2B. Cluster identification of multiple set 2. 4C. Related to Fig .2C. Cluster identification of multiple set 3.
DOI: 10.6084/m9.figshare.28916458
title: Additional file 8 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 8. Table S5. Related to Fig. 3B. Pathway analysis according to transcriptomic subtypes.
DOI: 10.6084/m9.figshare.28916458.v1
title: Additional file 8 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 8. Table S5. Related to Fig. 3B. Pathway analysis according to transcriptomic subtypes.
DOI: 10.6084/m9.figshare.28916461
title: Additional file 9 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 9. Table S6. Related to Fig. 3C. Total loading components of multiple set 3.
DOI: 10.6084/m9.figshare.28916455.v1
title: Additional file 7 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 7. Table S4A. Related to Fig. 2A. Cluster identification of multiple set 1. 4B. Related to Fig. 2B. Cluster identification of multiple set 2. 4C. Related to Fig .2C. Cluster identification of multiple set 3.
DOI: 10.6084/m9.figshare.28916461.v1
title: Additional file 9 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 9. Table S6. Related to Fig. 3C. Total loading components of multiple set 3.
DOI: 10.6084/m9.figshare.28916464
title: Additional file 10 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 10. Table S7. Related to Fig. 3D. Clustered pathway analysis separates multiple pathways into biological groups.
DOI: 10.6084/m9.figshare.28916464.v1
title: Additional file 10 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 10. Table S7. Related to Fig. 3D. Clustered pathway analysis separates multiple pathways into biological groups.
DOI: 10.6084/m9.figshare.28916467
title: Additional file 11 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 11. Table S8. Related to Fig. 3E. Enrichment scores with standard deviation for multiple sets.
DOI: 10.6084/m9.figshare.28916467.v1
title: Additional file 11 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 11. Table S8. Related to Fig. 3E. Enrichment scores with standard deviation for multiple sets.
DOI: 10.6084/m9.figshare.28916473
title: Additional file 12 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 12. Table S9. Related to Fig. 4A. 25 clinically-relevant antitumor reagents with AUC values for each cell line.
DOI: 10.6084/m9.figshare.28916473.v1
title: Additional file 12 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 12. Table S9. Related to Fig. 4A. 25 clinically-relevant antitumor reagents with AUC values for each cell line.
DOI: 10.6084/m9.figshare.28916476
title: Additional file 13 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 13. Table S10. Related to Fig. 4A. A. Multivariate Analysis of Variance with Transcriptomic Clusters with Shapiro-Wilk Normality Test. B. Wilcox ranked sum test with Mutation Status of PIK3CA. C. Wilcox ranked sum test with Mutation Status of TP53.
DOI: 10.6084/m9.figshare.28916476.v1
title: Additional file 13 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 13. Table S10. Related to Fig. 4A. A. Multivariate Analysis of Variance with Transcriptomic Clusters with Shapiro-Wilk Normality Test. B. Wilcox ranked sum test with Mutation Status of PIK3CA. C. Wilcox ranked sum test with Mutation Status of TP53.
DOI: 10.6084/m9.figshare.28916479
title: Additional file 14 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 14. Table S11. Related to Fig. 4B. Pearson correlation scores of drug responses to molecular factors.
DOI: 10.6084/m9.figshare.28916479.v1
title: Additional file 14 of Establishment and characterization of 24 breast cancer cell lines and 3 breast cancer organoids reveals molecular heterogeneity and drug response variability in malignant pleural effusion-derived models

description: Additional file 14. Table S11. Related to Fig. 4B. Pearson correlation scores of drug responses to molecular factors.
DOI: 10.15468/dl.angph6
title: Occurrence Download

description: A dataset containing 1377 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Batrachochytrium dendrobatidis Longcore, Pessier & D.K.Nichols"
 ]
}

 The dataset includes 1377 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0266414-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kold4y
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0092442-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bjd1sk
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017923-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dumk3t
title: Occurrence Download

description: A dataset containing 107602027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 107602027 records from 1792 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0417359-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jvbmbe
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002075-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ahqfol
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021429-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uiu4o9
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008648-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.liaz6l
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095194-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.npocdn
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002033-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.45ijnc
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095193-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xzqgod
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001995-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n4f6d7
title: Occurrence Download

description: A dataset listing the 42897 species recorded in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Mammalia"
 ]
}

 The dataset's 42897 records were derived from 14777 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075461-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/75wv7p
title: Records of epifauna of freshwater invertebrates from Danube Delta region during 2007-2012

description: The dataset includes 3206 records of more than 200 species of epifauna freshwater invertebrates mostly belonging to phylums Annelida, Arthropoda and Mollusca. Samples were collected from 104 sampling sites across the Danube Delta.
DOI: 10.15468/dl.js9h5b
title: Occurrence Download

description: A dataset containing 12534 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Bombinatoridae",
 "Year 2023-2025"
 ]
}

 The dataset includes 12534 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007904-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2c5pg4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brassica juncea",
 "Country is Dominican Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091583-250717081556266/datasets/export for details.
DOI: 10.15468/dl.zv4nm2
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brassica juncea",
 "Country is Estonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 80 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091584-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fby4re
title: Occurrence Download

description: A dataset containing 20895963 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Depth 0.0-85.0m",
 "Month is one of (January, February, March, May, April, June, July, August, September, October, November, December)",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia",
 "Year 1000-2024"
 ]
}

 The dataset includes 20895963 records from 2724 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091523-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1888026.10fu
title: SH1888026.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1888045.10fu
title: SH1888045.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5517/cc7lp6p
title: CCDC 226492: Experimental Crystal Structure Determination

description: Related Article: E.J.Chan, B.G.Cox, J.M.Harrowfield, M.I.Ogden, B.W.Skelton, A.H.White|2004|Inorg.Chim.Acta|357|2365|doi:10.1016/j.ica.2003.12.035
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25921/rq2y-4k67
title: NOAA/WDS Paleoclimatology - Global Sea-level and Deep-sea Temperature Reconstructions over the past 40 Million Years

description: Sea level and deep-sea temperature variations are key indicators of global climate changes. For continuous records over millions of years, deep-sea carbonate microfossil–based d18O (dc) records are indispensable because they reflect changes in both deep-sea temperature and seawater d18O (dw); the latter are related to ice volume and, thus, to sea level changes. Deep-sea temperature is usually resolved using elemental ratios in the same benthic microfossil shells used for dc, with linear scaling of residual dw to sea level changes. Uncertainties are large and the linear-scaling assumption remains untested. Here, we present a new process-based approach to assess relationships between changes in sea level, mean ice sheet d18O, and both deep-sea dw and temperature and find distinct nonlinearity between sea level and dw changes. Application to dc records over the past 40 million years suggests that Earth’s climate system has complex dynamical behavior, with threshold-like adjustments (critical transitions) that separate quasi-stable deep-sea temperature and ice-volume states.
DOI: 10.5517/cc7pyvp
title: CCDC 229643: Experimental Crystal Structure Determination

description: Related Article: B.Orzeszko, Z.Kazimierczuk, J.K.Maurin, A.E.Laudy, B.J.Starosciak, J.Vilpo, L.Vilpo, J.Balzarini, A.Orzeszko|2004|Il Farmaco|59|929|doi:10.1016/j.farmac.2004.07.010
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc802t4
title: CCDC 238415: Experimental Crystal Structure Determination

description: Related Article: K.Onitsuka, M.Fujimoto, H.Kitajima, N.Oshiro, F.Takei, S.Takahashi|2004|Chem.-Eur.J.|10|6433|doi:10.1002/chem.200400544
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.