cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.6s5gvm
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brugmansia suaveolens",
 "Country is Ethiopia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 92 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029682-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16922849
title: Pamflow's tutorial dataset

description: This is a minimal toy dataset meant to run tests on the passive acoustic data pipeline pamflow.

Each folder contains passively collected acoustic files recorded at Guaviare, Colombia during a project conducted by FCDS and Instituto Humboldt. The acoustic devices where set and collected by members of the project and the community that hosted it (see table bellow)

 


MOISES ROMERO FRANCO


ANIBAL DE JESUS MARTINEZ PEÑA


DANIEL CHITIVA DIAZ


NUBIA QUINTERO MEDINA


EDGAR GUSTAVO RODRIGUEZ GARZON


GRANJA ESCUELA CAPRICHO GRANJA ESCUELA CAPRICHO


MARIA DE LOS ANGELES GAITAN MUÑOS


FLOR MARLENI GAITAN MUÑOS


JEFFERSON COCINERO GARCIA


JOSE EDUARDO LEON TRIANA


CESAR AUGUSTO URREGO GONZALEZ


ANDERSON URREA TACUMA


LUZ IDALBA RESTREPO SUAREZ


MARIA DE LOS ANGELES GAITAN MUÑOZ


EDWIN ALCIDES REYES LOPEZ
DOI: 10.5281/zenodo.16922285
title: A comparison of short- and long-read whole genome sequencing for microbial pathogen epidemiology

description: Whole genome sequencing provides the highest resolution for characterizing pathogen evolution, epidemiology, and diagnostics. Genome assemblies contain information on the identity and potential phenotypes of a pathogen. Likewise, variant calling can inform on transmission patterns and evolutionary relationships. Recent improvements in Oxford Nanopore long-read sequencing have made its use attractive for genomic epidemiology. However, the accuracy and optimal strategy for analysis of Nanopore reads remains to be determined. We compared the use of Illumina short reads and Oxford Nanopore long reads for genome assembly and variant calling of phytopathogenic bacteria. We generated short- and long-read datasets for diverse phytopathogenic Agrobacterium strains. We then analyzed these data using multiple pipelines designed for either short or long reads and compared the results. We found that assemblies made from long reads were more complete than those made from short-read data and contained few sequence errors. Variant calling pipelines differed in their ability to accurately call variants and infer genotypes from long reads. Results suggest that computationally fragmenting long reads can improve the accuracy of variant calling in population-level studies. Using fragmented long reads, pipelines designed for short reads were more accurate at recovering genotypes than pipelines designed for long reads. Further, short- and long-read datasets can be analyzed together with the same pipelines. These findings show that Oxford Nanopore sequencing is accurate and can be sufficient for microbial pathogen genomics and epidemiology. Ultimately, this enhances the ability of researchers and clinicians to understand and mitigate the spread of pathogens.
DOI: 10.15468/dl.vp2j4z
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brugmansia suaveolens",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 52 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029684-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z46ama
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brugmansia suaveolens",
 "Country is Fiji",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029683-250811113504898/datasets/export for details.
DOI: 10.15468/dl.q73m5e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blackfordia virginica",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029685-250811113504898/datasets/export for details.
DOI: 10.15468/dl.zb6vzm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blackfordia virginica",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029686-250811113504898/datasets/export for details.
DOI: 10.15468/dl.bvbw72
title: Occurrence Download

description: A dataset containing 69774 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vultur gryphus"
 ]
}

 The dataset includes 69774 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029634-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3bkwun
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blackfordia virginica",
 "Country is Bulgaria",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029687-250811113504898/datasets/export for details.
DOI: 10.5519/qd.zculz055
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (56 records)
DOI: 10.15468/dl.xkrayf
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brugmansia suaveolens",
 "Country is Kenya",
 "HasCoordinate is true"
 ]
}

 The dataset includes 67 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029689-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jv8vw4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blackfordia virginica",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029690-250811113504898/datasets/export for details.
DOI: 10.15468/dl.z4vpmh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blackfordia virginica",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029691-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jq3u98
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brugmansia suaveolens",
 "Country is Indonesia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 33 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029688-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qmsgbq
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blackfordia virginica",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 36 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029692-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.8ha6arp7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (18 records)
DOI: 10.15468/dl.g7j59g
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brugmansia suaveolens",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029694-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13625158
title: Final Version of the Data associated to the publication "A Benchmark for Finite Prandtl Number Convection: Comparison of Boltzmann and Navier-Stokes Solutions"

description: Final Version of V_rms and Nu for the three codes, GAIA, StreamV, TLBM, used for a benchmark manuscript titled "A Benchmark for Finite Prandtl Number Convection: Comparison of Boltzmann and Navier-Stokes Solutions", Authors: Gabriele Morra, Peter Mora, Christian Huttig, Nicola Tosi, Henri Samuel, David A. Yuen

The Zip file contains both npy and out versions of V_rms and Nu. In the out files, time is embedded in each file. In the "npy" version, time is a separate npy file. In this final version, pdf figures for each case are also embedded.
DOI: 10.5281/zenodo.16922811
title: Final Version of the Data associated to the publication "A Benchmark for Finite Prandtl Number Convection: Comparison of Boltzmann and Navier-Stokes Solutions"

description: Final Version of V_rms and Nu for the three codes, GAIA, StreamV, TLBM, used for a benchmark manuscript titled "A Benchmark for Finite Prandtl Number Convection: Comparison of Boltzmann and Navier-Stokes Solutions", Authors: Gabriele Morra, Peter Mora, Christian Huttig, Nicola Tosi, Henri Samuel, David A. Yuen

The Zip file contains both npy and out versions of V_rms and Nu. In the out files, time is embedded in each file. In the "npy" version, time is a separate npy file. In this final version, pdf figures for each case are also embedded.
DOI: 10.5281/zenodo.16922765
title: Datasets for "A Practical Guide to Transition State Analysis in Biomolecular Simulations with TS-DAR"

description: 3 Datasets for "A Practical Guide to Transition State Analysis in Biomolecular Simulations with TS-DAR": (a). Alanine Dipeptide, (b). Villian headpiece H35 peptide, (c). PP2A.  All these datasets contain the featurized MD conformations, rather than the original x,y,z coordinates.
DOI: 10.15468/dl.9btbgc
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brugmansia suaveolens",
 "Country is Malawi",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029693-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ep4sq6
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blackfordia virginica",
 "Country is Romania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029695-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ekq8ja
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blackfordia virginica",
 "Country is Ukraine",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029696-250811113504898/datasets/export for details.
DOI: 10.15468/dl.h9j79n
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blackfordia virginica",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 26 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029697-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26093/cds/vizier.36470137
title: 800pc tidal tail of Hyades

description: VizieR online Data Catalogue associated with article published in journal Astronomy and Astrophysics with title ' The 800pc long tidal tails of the Hyades star cluster. Possible discovery of candidate epicyclic overdensities from an open star cluster.' (bibcode: 2021A&A...647A.137J)
DOI: 10.26093/cds/vizier.36470152
title: Tully-Fisher relation in MAGIC groups

description: VizieR online Data Catalogue associated with article published in journal Astronomy and Astrophysics with title ' The Tully-Fisher relation in dense groups at z~0.7 in the MAGIC survey.' (bibcode: 2021A&A...647A.152A)
DOI: 10.26093/cds/vizier.36840144
title: Ammonia observations of Planck cold cores

description: VizieR online Data Catalogue associated with article published in journal Astronomy and Astrophysics with title ' Ammonia observations of Planck cold cores.' (bibcode: 2024A&A...684A.144B)
DOI: 10.26093/cds/vizier.36840208
title: Unassociated Fermi-LAT sources seen with eROSITA

description: VizieR online Data Catalogue associated with article published in journal Astronomy and Astrophysics with title ' Searching for X-ray counterparts of unassociated Fermi-LAT sources and rotation-powered pulsars with SRG/eROSITA.' (bibcode: 2024A&A...684A.208M)
DOI: 10.60719/aphrc-2025-059
title: A Qualitative Study on Visibility of African Journals: A Case for Kenya

description: Journals are the primary medium for scholarly communication among academic communities. Journal visibility helps researchers to make decisions on where to publish. Some of the visibility platforms include Google Scholar (GS) platform, Scopus platform, Open Access (OA) system, Directory of Open Access Journals (DOAJ) platform, International Standard Serial Number (ISSN) platform, International Network for Advancing Science and Policy (INASP) platform, Web of Science (WoS) and PubMed platform. There is limited visibility of African journals which can be attributed to a number of underlying factors that affect the journal editorial practices. The factors include a lack of awareness among researchers, challenges related to access and dissemination, financial constraints, and limited access to digital platforms and technological infrastructure.

Methodology
This study employed a cross-sectional study design and the data was collected qualitatively. In-depth interviews (IDIs), Key Informant Interviews (KIIs) were conducted in Kenya. Focus Group Discussions (FGDs) were conducted conducted in Kenya, Ethiopia, Nigeria, and Mozambique . The study population comprised the journal chief editors, representatives from African-wide journal databases/indexers, institutional repository representatives, and researchers. A purposive sampling technique was utilized in identifying the study participants. Ethical approvals were sought from relevant bodies in the countries. The qualitative data from the audio-recorded interviews was transcribed using MS Word and exported to NVivo software for analysis. The analysis was based on pre-defined themes as well as the use of open inductive content analysis.
DOI: 10.15468/dl.8fx42y
title: Occurrence Download

description: A dataset containing 1340 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Statewide Alaska Tern Occurrences"
 ]
}

 The dataset includes 1340 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028851-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hbr5dd
title: Occurrence Download

description: A dataset containing 2030849 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio L."
 ]
}

 The dataset includes 2030849 records from 4624 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002409-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b99drt
title: Occurrence Download

description: A dataset containing 181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eleusine indica (L.) Gaertn.",
 "Country is Nigeria"
 ]
}

 The dataset includes 181 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008102-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2kahjg
title: Occurrence Download

description: A dataset containing 5459 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eucalyptus sideroxylon A.Cunn. ex Woolls"
 ]
}

 The dataset includes 5459 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029367-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bmxfzs
title: Occurrence Download

description: A dataset containing 3058 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Crudia Schreb."
 ]
}

 The dataset includes 3058 records from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029369-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29061068
title: Decoding Urban Mobility: A Spatiotemporal Comparison of Ride-hailing and Traditional Taxi Pick-up/Drop-off Dynamics

description: This dataset is used to explore the spatiotemporal differences in the number of pick-up and drop-off passengers of ride-hailing services and taxis. It respectively includes the pick-up points, drop-off points, latitude and longitude information, and time information of passengers of taxis and ride-hailing vehicles, and is stored in the form of a csv file. It covers the data of three days, namely June 1, 2019 (weekend), June 5, 2019 (weekday), and June 7, 2019 (holiday). Gridswithfactors.shp is the grid data of the study area, and the influencing factors are stored in the attribute table.
DOI: 10.15468/dl.rv4s7a
title: Occurrence Download

description: A dataset containing 2802 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fraxinus uhdei (Wenz.) Lingelsh."
 ]
}

 The dataset includes 2802 records from 156 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029370-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yschmc
title: Occurrence Download

description: A dataset containing 2857 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dahlia coccinea Cav.",
 "Year 1995-2025"
 ]
}

 The dataset includes 2857 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029371-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.br8pjw
title: Occurrence Download

description: A dataset containing 425 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "GadmGid is IDN.21.11_1",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 425 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029373-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.37re94
title: Occurrence Download

description: A dataset containing 18302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Crupina (Pers.) DC."
 ]
}

 The dataset includes 18302 records from 328 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029372-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.evbkbu
title: Occurrence Download

description: A dataset containing 10557 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geijera parviflora Lindl."
 ]
}

 The dataset includes 10557 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029374-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/11803493
title: Layline Shareholder activism dataset
DOI: 10.15468/dl.cb37sr
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Análisis de los efectos ecológicos del aprovechamiento forestal en el Corredor Biológico Mesoamericano: mamíferos, plantas y sus interacciones",
 "TaxonKey is Puma yagouaroundi (É.Geoffroy Saint-Hilaire, 1803)"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029375-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ef8h4r
title: Occurrence Download

description: A dataset containing 15056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Issue is one of (Coordinate reprojected, The taxon concept ID was not used in backbone matching, The taxon ID was not used in backbone matching, Coordinate rounded, Continent derived from coordinates)",
 "OccurrenceStatus is Present",
 "TaxonKey is Cathartes melambrotus Wetmore, 1964",
 "Year 1970-2015"
 ]
}

 The dataset includes 15056 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011995-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.