cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4429249
title: SH2-containing-inositol-5-phosphatases (INPP5D); A Target Enabling Package

description: SH2-containing-inositol-5-phosphatases (SHIP1 and SHIP2, coded for by genes <em>INPP5D</em> and <em>INPPL1</em>, respectively) dephosphorylate phosphatidylinositol-3,4,5-trisphosphate (PI(3,4,5)P<sub>3</sub>) to produce phosphatidylinositol-3,4-bisphosphate (PI(3,4)P<sub>2</sub>). This is an important part of the PI3K/AKT/mTOR signalling pathway. The SHIPs have been linked to a range of conditions, including cancer, diabetes, hypertension, and graft versus host disease. A link has also been demonstrated by GWAS between a non-coding mutation in the <em>INPP5D</em> (SHIP1) gene and increased risk of late-onset Alzheimer’s disease. The role of SHIP1 in Alzheimer’s disease is believed to be mediated through inflammatory processes such as the regulation of microglia and cytokine release. The distinction between the effects of SHIP1 and SHIP2 on these processes is not fully understood. In this TEP we present an apo structure of the phosphatase and C2 domains of SHIP1 and a structure with a magnesium ion and a phosphate ion bound to the active site. We also present 91 fragment bound structures that may act as starting points for the modulation of SHIP1. We are also able to crystallise an equivalent construct of SHIP2 and purify a range of other inositol-5-phosphatases to serve as a selectivity panel for the development of specific compounds. An assay has also been developed.
description: Future versions of this TEP will contain experimental data on the INPP5D TEP.
DOI: 10.5281/zenodo.4429255
title: Description of tools for the sustainability assessment of farms and farming systems

description: <strong>The “summary” table shows the papers and names of the tools and the link to the main publication as well as the use of the paper in each part of the analysis. We presented the variables for all the methods in a table called “method” with the result of the classification. In the table “dimension”, we presented the extraction of the dimension of sustainability and classification of methods. We did the same for the “themes” with a colour that we used for providing the descriptive statistics on the number of themes per dimension. We used three tables for each indicator that present the name of the indicator as extracted in the publication.</strong>
description: {"references": ["Chopin et al., Agronomy for Sustainable Development. Avenues for assessing farming system sustainability with upgraded tools, sustainability framing and indicators. A review"]}
DOI: 10.5281/zenodo.4429254
title: Description of tools for the sustainability assessment of farms and farming systems

description: <strong>The “summary” table shows the papers and names of the tools and the link to the main publication as well as the use of the paper in each part of the analysis. We presented the variables for all the methods in a table called “method” with the result of the classification. In the table “dimension”, we presented the extraction of the dimension of sustainability and classification of methods. We did the same for the “themes” with a colour that we used for providing the descriptive statistics on the number of themes per dimension. We used three tables for each indicator that present the name of the indicator as extracted in the publication.</strong>
description: {"references": ["Chopin et al., Agronomy for Sustainable Development. Avenues for assessing farming system sustainability with upgraded tools, sustainability framing and indicators. A review"]}
DOI: 10.25345/c53b7j
title: MassIVE MSV000086676 - Sewage Sludge samples from March-June 2020
title: .RAW files and Compound Discoverer used for a manuscript regarding changes the chemical fingerprint of sewage sludge during the COVID-19 pandemic
DOI: 10.21429/cr80-fy95
title: Pairwise comparisons of river herring run dynamics and environmental regimes among Massachusetts streams

description: The timing of life-history events in many plants and animals depend on specific environmental conditions that fluctuate with seasonal conditions. Climate change is altering environmental regimes and disrupting natural cycles and patterns across communities. Anadromous fishes that migrate between marine and freshwater habitats to spawn are particularly sensitive to shifting environmental conditions, and thus are vulnerable to the effects of climate change. However, for many anadromous fish species the specific environmental mechanisms driving migration and spawning patterns are not well understood. The data in this release are a supplement to the publication Legett et al. (2021). Daily patterns of river herring (Alosa spp.) spawning migrations: environmental drivers and variation among coastal streams in Massachusetts. Trans. Am. Fish. The aim of the study was to investigate the upstream spawning migrations of river herring (Alosa spp.) in 12 coastal Massachusetts streams.The results are pairwise comparisons for seasonal river herring run dynamics and environmental regimes among the streams.
DOI: 10.18434/mds2-2339
title: Mapping of NIST Cybersecurity Framework Subcategories to Threat Scenarios from the National Electric Sector Cybersecurity Organization Resource (NESCOR) Electric Sector Failure Scenarios and Impact Analyses - Version 3.0
DOI: 10.6084/m9.figshare.13315220
title: mydata.rds

description: Collection of processed sequencing data and metadata required to run custom scripts presented in "Profiling Serum Antibodies with a Pan Allergen Phage Library Identifies Key Wheat Allergy Epitopes" by Monaco et al.<br>Data is in the format of an RDS file and can be opened in R/R Studio for use in custom code.
DOI: 10.18434/m31933
title: *** SUPERSEDED *** Albatross Species Chemical Database and Annotated Bibliography

description: These data have been superseded. View data available at https://doi.org/10.18434/mds2-2304
DOI: 10.21227/jfay-qa71
title: optimal operating condition data of 8 pump-turbine

description: It contains all the optimal operating condition data from case 1 to case 8 used to verify the optimal linear model. The file name is “DataSource.xlsx”.
DOI: 10.21227/z7cf-cm74
title: optimal operating condition data of 8 pump-turbine

description: It contains all the optimal operating condition data from case 1 to case 8 used to verify the optimal linear model. The file name is “DataSource.xlsx”.
DOI: 10.6084/m9.figshare.3761562.v1739
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.13549592
title: Supplemental Table 2

description: <b>Supplemental Table 2.</b> Genomic Data. A) Primers used for qPCR confirmation of microarray results. B) RKO microarray, IPA input genes. C) RKO IPA, KEGG Biological Functions. D) RKO IPA, KEGG Pathways. E) RKO IPA, KEGG Transcription Factors. F through H contain RKO GSEA results: F) KEGG ribosome, G) KEGG oxidative phosphorylation, and H) KEGG proteosome gene sets. I through L contain Rapa IPA input genes: I) 0 hr, J) 3 hr, K) 6 hr and L) 12 hr. M through Q contain Rapa IPA results: M) Biological Functions at 3 hr, N) Canonical Pathways at 3 hr, O) Transcription Factors at 0 hr, P) Transcription Factors at 3 hr, and Q) Transcription Factors at 12 hr.
DOI: 10.6084/m9.figshare.13549592.v1
title: Supplemental Table 2

description: <b>Supplemental Table 2.</b> Genomic Data. A) Primers used for qPCR confirmation of microarray results. B) RKO microarray, IPA input genes. C) RKO IPA, KEGG Biological Functions. D) RKO IPA, KEGG Pathways. E) RKO IPA, KEGG Transcription Factors. F through H contain RKO GSEA results: F) KEGG ribosome, G) KEGG oxidative phosphorylation, and H) KEGG proteosome gene sets. I through L contain Rapa IPA input genes: I) 0 hr, J) 3 hr, K) 6 hr and L) 12 hr. M through Q contain Rapa IPA results: M) Biological Functions at 3 hr, N) Canonical Pathways at 3 hr, O) Transcription Factors at 0 hr, P) Transcription Factors at 3 hr, and Q) Transcription Factors at 12 hr.
DOI: 10.6084/m9.figshare.13549493
title: Supplemental Table 1

description: <b>Supplemental Table 1.</b> Phosphoproteomic Data. A) Full proteomic dataset. B) Significantly different phosphopeptides. C) Phosphopeptides likely decreased in RKO mice. D) Phosphopeptides likely increased in RKO mice. E) Genes entered into IPA. These genes represent phosphoproteins that differed between wild type and experimental groups by &gt;1.5-fold. F) Control genes entered into IPA. These genes represent five equally sized groups of randomly selected control phosphopeptides (fold change &lt;1.1).
DOI: 10.25345/c5zn48
title: MassIVE MSV000086677 - GNPS - Human Gut Bacteria Pilot Biotransformation subset 6-24h
title: Subset (6h, 18h and 24h) time-course pilot culture of human gut bacteria [Bacteroides thetaiotaomicron VPI-5482 NCBI:txid818 | Bacteroides vulgatus ATCC 8482 NCBI:txid435590 | Akkermansia muciniphila ATCC BAA-835 NCBI:txid349741 | Bifidobacterium longum subsp. infantis ATCC 15697 NCBI:txid391904] (Zengler Lab UCSD) on diluted BHI enriched with chemical compounds under anaerobic conditions. 50% MeOH:water extracts analyzed by LC-MS/MS performed in an UltiMate 3000 UPLC system (Thermo Scientific) using a Kinetex 1.7 um C18 reversed phase UHPLC column (50 X 2.1 mm) and Maxis Impact Q-TOF mass spectrometer (Bruker Daltonics) equipped with ESI source. Data was acquired in positive ion mode.
DOI: 10.15468/dl.fqcqjr
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polyscias mauritiana Marais"
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080210-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m544bu
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla spodiochlora Soják"
 ]
}

 The dataset includes 18 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080211-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.32j8se
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pogostemon aquaticus (C.H.Wright) Press"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080212-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.46jpbt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Aquilaria"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080213-240321170329656/datasets/export for details.
DOI: 10.15468/dl.drzhvy
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polystachya mystacioides De Wild."
 ]
}

 The dataset includes 62 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080214-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6jrcdy
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prismatocarpus implicatus Adamson"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080215-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bmy6cu
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polyscias mayottensis Lowry, Pascal & Labat"
 ]
}

 The dataset includes 83 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080216-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c27p76
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla squamosa Soják"
 ]
}

 The dataset includes 73 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080217-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zu6je8
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pogostemon atropurpureus Benth."
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080218-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vpzxvp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Aquilaria"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080219-240321170329656/datasets/export for details.
DOI: 10.15468/dl.sf6n56
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polystachya mzuzuensis P.J.Cribb & la Croix"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080220-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69kvcr
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prismatocarpus lasiophyllus Adamson"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080221-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7s69j
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polyscias microbotrys (Baill.) Harms"
 ]
}

 The dataset includes 65 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080222-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4bnjqd
title: Occurrence Download

description: A dataset containing 1095 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pogostemon auricularius (L.) Hassk."
 ]
}

 The dataset includes 1095 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080224-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z4fd7h
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla stepposa Soják"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080223-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7cuv8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Aquilaria"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080225-240321170329656/datasets/export for details.
DOI: 10.15468/dl.yvgnvs
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polystachya neobenthamia Schltr."
 ]
}

 The dataset includes 96 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080227-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68px3t
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prismatocarpus lycioides Adamson"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080226-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fbm4sw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Aguilaria J. D. Taylor & F. E. Wells, 1994"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080230-240321170329656/datasets/export for details.
DOI: 10.15468/dl.rw45wz
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polyscias montana (Ridl.) Lowry & G.M.Plunkett"
 ]
}

 The dataset includes 26 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080229-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.te2rnf
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pogostemon barbatus Bhoti & Ingr."
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080232-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uud64b
title: Occurrence Download

description: A dataset containing 10221 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Verbena bracteata Cav. ex Lag. & Rodr."
 ]
}

 The dataset includes 10221 records from 236 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080228-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ea6uf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Aguilaria J.D.Taylor & F.E.Wells, 1994"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080233-240321170329656/datasets/export for details.
DOI: 10.15468/dl.nw2n72
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polystachya ngomensis G.McDonald & McMurtry"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080236-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6cn6hv
title: Occurrence Download

description: A dataset containing 266 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polyscias multibracteata (Baker) Harms"
 ]
}

 The dataset includes 266 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080237-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6yakj7
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prismatocarpus lycopodioides A.DC."
 ]
}

 The dataset includes 23 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080235-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6b9jgd
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pogostemon benghalensis (Burm.f.) Kuntze"
 ]
}

 The dataset includes 109 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080238-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qkvywa
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Juniperus komarovii Florin"
 ]
}

 The dataset includes 146 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080239-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r6aate
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polystachya nyanzensis Rendle"
 ]
}

 The dataset includes 37 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080242-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqpe8f
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prismatocarpus nitidus L'Hér."
 ]
}

 The dataset includes 81 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080243-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h3mum4
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Aguilaria J.D.Taylor & F.E.Wells, 1994"
 ]
}

 The dataset includes 32 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080240-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.