cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7445378.v2
title: Archetypal Analysis With Missing Data: See All Samples by Looking at a Few Based on Extreme Profiles

description: In this article, we propose several methodologies for handling missing or incomplete data in archetype analysis (AA) and archetypoid analysis (ADA). AA seeks to find archetypes, which are convex combinations of data points, and to approximate the samples as mixtures of those archetypes. In ADA, the representative archetypal data belong to the sample, that is, they are actual data points. With the proposed procedures, missing data are not discarded or previously filled by imputation and the theoretical properties regarding location of archetypes are guaranteed, unlike the previous approaches. The new procedures adapt the AA algorithm either by considering the missing values in the computation of the solution or by skipping them. In the first case, the solutions of previous approaches are modified to fulfill the theory and a new procedure is proposed, where the missing values are updated by the fitted values. In this second case, the procedure is based on the estimation of dissimilarities between samples and the projection of these dissimilarities in a new space, where AA or ADA is applied, and those results are used to provide a solution in the original space. A comparative analysis is carried out in a simulation study, with favorable results. The methodology is also applied to two real datasets: a well-known climate dataset and a global development dataset. We illustrate how these unsupervised methodologies allow complex data to be understood, even by nonexperts. Supplementary materials for this article are available online.
DOI: 10.7284/110140
title: Winch data collected during research cruise MV1208 using a Markey DUSH-5 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7445375
title: Iterative Multiple Imputation: A Framework to Determine the Number of Imputed Datasets

description: We consider multiple imputation as a procedure iterating over a set of imputed datasets. Based on an appropriate stopping rule the number of imputed datasets is determined. Simulations and real-data analyses indicate that the sufficient number of imputed datasets may in some cases be substantially larger than the very small numbers that are usually recommended. For an easier use in various applications, the proposed method is implemented in the R package imi.
DOI: 10.7284/110208
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise MV1209 using a Hawaii UHDAS instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7445375.v1
title: Iterative multiple imputation: a framework to determine the number of imputed datasets<sup>*</sup>

description: We consider multiple imputation as a procedure iterating over a set of imputed datasets. Based on an appropriate stopping rule the number of imputed datasets is determined. Simulations and real-data analyses indicate that the sufficient number of imputed datasets may in some cases be substantially larger than the very small numbers that are usually recommended. For an easier use in various applications, the proposed method is implemented in the R package imi.
DOI: 10.6084/m9.figshare.7445372
title: Assignment 02 u1862646

description: https://drive.google.com/drive/folders/1iDl6A18H88R6yBTzBWFQQ_cBYAhfkkKT?usp=sharing
DOI: 10.7284/110201
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise MV1209 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7445372.v1
title: Assignment 02 u1862646

description: https://drive.google.com/drive/folders/1iDl6A18H88R6yBTzBWFQQ_cBYAhfkkKT?usp=sharing
DOI: 10.25390/caryinstitute.7445366
title: Cary Environmental Monitoring Program Hourly Meteorological and Solar Radiation Data: 1988-2017

description: The Cary Institute of Ecosystem Studies Environmental Monitoring Program is a long-term data collection program designed to understand how the environment changes over time. The program includes monitoring of climate including temperature and precipitation, as well as variables related to air pollution, such as acid deposition and ozone, and water pollution and other streamwater chemistry. Our solar radiation monitoring includes diffuse and global photosynthetically active radiation (PAR), diffuse and global shortwave radiation, net radiation and UV. Long-term monitoring of solar radiation provides us with an understanding of atmospheric energy dynamics, which can affect natural and human systems. The Cary Institute of Ecosystem Studies, Environmental Monitoring Program furnishes data under the following conditions: The data have received quality assurance scrutiny by our program, and, although we are confident of the accuracy of these data, the Cary Institute will not be held liable for errors in these data. Data are subject to change resulting from updates in data screening or models used. Data citation: The following is a standard citation for referencing data from the Cary Institute of Ecosystem Studies, Environmental Monitoring Program:<br>Cary Institute of Ecosystem Studies, Environmental Monitoring Program. 2008 (or current year). Cary Institute of Ecosystem Studies, Box AB, Millbrook, NY 12545, www.caryinstitute.org. <br>Those wishing to publish data from the Cary Institute of Ecosystem Studies, Environmental Monitoring Program are encouraged to contact Data Manager Vicky Kelly, kellyv@caryinstitute.org.
DOI: 10.7284/110203
title: Expendable Probe data collected during research cruise MV1209 using a Sippican MK21 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.25390/caryinstitute.7445366.v1
title: Cary Environmental Monitoring Program Hourly Meteorological and Solar Radiation Data: 1988-2017

description: The Cary Institute of Ecosystem Studies Environmental Monitoring Program is a long-term data collection program designed to understand how the environment changes over time. The program includes monitoring of climate including temperature and precipitation, as well as variables related to air pollution, such as acid deposition and ozone, and water pollution and other streamwater chemistry. Our solar radiation monitoring includes diffuse and global photosynthetically active radiation (PAR), diffuse and global shortwave radiation, net radiation and UV. Long-term monitoring of solar radiation provides us with an understanding of atmospheric energy dynamics, which can affect natural and human systems. The Cary Institute of Ecosystem Studies, Environmental Monitoring Program furnishes data under the following conditions: The data have received quality assurance scrutiny by our program, and, although we are confident of the accuracy of these data, the Cary Institute will not be held liable for errors in these data. Data are subject to change resulting from updates in data screening or models used. Data citation: The following is a standard citation for referencing data from the Cary Institute of Ecosystem Studies, Environmental Monitoring Program:<br>Cary Institute of Ecosystem Studies, Environmental Monitoring Program. 2008 (or current year). Cary Institute of Ecosystem Studies, Box AB, Millbrook, NY 12545, www.caryinstitute.org. <br>Those wishing to publish data from the Cary Institute of Ecosystem Studies, Environmental Monitoring Program are encouraged to contact Data Manager Vicky Kelly, kellyv@caryinstitute.org.
DOI: 10.7284/110196
title: GNSS (Global Navigation Satellite System) data collected during research cruise MV1209 using a Furuno GP-150 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/110204
title: GNSS (Global Navigation Satellite System) data collected during research cruise MV1209 using a Ashtech ADU2 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7443431
title: NicholsonEtal2019_validation_metadata

description: Variable descriptions for "NicholsonEtal2019_LEM_validation.csv" & "NicholsonEtal2019_CPF_validation.csv"
DOI: 10.7284/110206
title: Gravimeter data collected during research cruise MV1209 using a Bell BGM-3 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7443431.v1
title: NicholsonEtal2019_validation_metadata

description: Variable descriptions for "NicholsonEtal2019_LEM_validation.csv" & "NicholsonEtal2019_CPF_validation.csv"
DOI: 10.6084/m9.figshare.7443305
title: PathMe Workflow

description: PathMe Framework Workflow. The PathMe software package facilitates the transformation of pathway content into BEL. The initial step consists of extracting, parsing and/or querying content from each pathway database to retrieve entities, concepts, interactions and reactions and their associated meta-data. Subsequently, database specific identifiers for all entities are unified to stable and consistent ones, where possible. Data is then directly mapped into equivalent BEL nodes and edges, translating all human pathways from the databases into BEL. Finally, an interactive pathway viewer is implemented such that any combination of BEL networks can be explored and the consensus surrounding pathway knowledge can be directly compared.
DOI: 10.6084/m9.figshare.7443326
title: VP1_raw

description: Dataset from Ehinger, Groß et. al 2019A test battery for eye tracking comparisons. Concurrent recording of Eyelink 1000 & Pupil Labs Glasses in 15 subject in many different tasks<br>
DOI: 10.7284/110199
title: Gyrocompass data collected during research cruise MV1209 using a SGB Meridian instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/110198
title: INS (Inertial Navigation System) data collected during research cruise MV1209 using a TSS TSS Orion instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7443227.v1
title: CNI_Minor_Swift20181011.pptx

description: Presentation for the Fall 2018 membership meeting of the Coalition for Networked Information (CNI) on Dec. 10, 2018. <br>https://www.cni.org/events/membership-meetings/upcoming-meeting/fall-2018/schedule-f18The goal of the project is to shape and guide infrastructure adoption so that our academic institutions will influence and contribute to a healthy, sustainable, fair and equitable research information and scholarly communication ecosystem. <br>Related to https://doi.org/10.6084/m9.figshare.7406849 <br>
DOI: 10.7284/114664
title: INS (Inertial Navigation System) data collected during research cruise MV1209 using a CodaOctopus F-185 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/115497
title: Meteorological Station data collected during research cruise MV1209 using a SIO MET-System instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7443137
title: Seed Data Set_and Raw Data.xlxs from Superb autorotator: rapid decelerations in impulsively launched samaras

description: First sheet shows the datasets used for statistical analysis. Other sheets show 3D digitized data from 5 individual maple seeds during free-fall and when launched either vertically or launched horizontally. Each sheet displays the sparse digitized data from DLTdv6.m software: seed tip (point 1 and 2), seed root (points 3 and 4), and seed tip at maximal length (points 5 and 6), corresponding to (x, y) Cartesian coordinates in units of cm. Software is described in: Hedrick, T. L. (2008). Software techniques for two- and three-dimensional kinematic measurements of biological and biomimetic systems. Bioinspir. Biomim. 3, 034001.
DOI: 10.7284/110200
title: Multibeam Echosounder data collected during research cruise MV1209 using a Kongsberg EM122 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7443137.v1
title: Seed Data Set_and Raw Data.xlxs from Superb autorotator: rapid decelerations in impulsively launched samaras

description: First sheet shows the datasets used for statistical analysis. Other sheets show 3D digitized data from 5 individual maple seeds during free-fall and when launched either vertically or launched horizontally. Each sheet displays the sparse digitized data from DLTdv6.m software: seed tip (point 1 and 2), seed root (points 3 and 4), and seed tip at maximal length (points 5 and 6), corresponding to (x, y) Cartesian coordinates in units of cm. Software is described in: Hedrick, T. L. (2008). Software techniques for two- and three-dimensional kinematic measurements of biological and biomimetic systems. Bioinspir. Biomim. 3, 034001.
DOI: 10.6084/m9.figshare.7443125
title: VP2_raw

description: Dataset from Ehinger, Groß et. al 2019A test battery for eye tracking comparisons. Concurrent recording of Eyelink 1000 & Pupil Labs Glasses in 15 subject in many different tasks<br>
DOI: 10.7284/110197
title: TSG (Thermosalinograph) data collected during research cruise MV1209 using a Sea-Bird SBE-45 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7443125.v1
title: VP2_raw

description: Dataset from Ehinger, Groß et. al 2019A test battery for eye tracking comparisons. Concurrent recording of Eyelink 1000 & Pupil Labs Glasses in 15 subject in many different tasks<br>
DOI: 10.7284/110207
title: Winch data collected during research cruise MV1209 using a Markey DUSH-5 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/110223
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise MV1210 using a Hawaii UHDAS instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/110216
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise MV1210 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/110218
title: Expendable Probe data collected during research cruise MV1210 using a Sippican MK21 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/110211
title: GNSS (Global Navigation Satellite System) data collected during research cruise MV1210 using a Furuno GP-150 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7442915.v1
title: A synthesis of global change manipulative experiments: What have we learned?

description: Database for the manuscript entitled "A synthesis of global change manipulative experiments: What have we learned?".
DOI: 10.7284/110219
title: GNSS (Global Navigation Satellite System) data collected during research cruise MV1210 using a Ashtech ADU2 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.15131/shef.data.7442645
title: Data for "Personalised 3D knee compliance from clinically viable knee laxity measurements: A proof of concept ex vivo experiment"

description: Data pertaining to:Lamberto, G., Amin, D., Solomon, B., Reynolds, K., Mazzà, C., Martelli, S. (In Submission), "Personalized 3D knee compliance from clinically viable knee laxity measurements: a proof of ex vivo experiment", Medical Engineering & Physics<br>
DOI: 10.6084/m9.figshare.7442711
title: Functional and structural liver abnormalities in former PCB exposed workers – analyses from the HELPcB cohort

description: The effects of polychlorinated biphenyls (PCB) on liver function and structure are still under debate. Although higher transaminase activity and tumor promoting potential of PCB reported for animal and human studies was suggested, these studies were not able to provide definitive evidence on the ability of these chemicals to affect liver function and contribution to tumor development. The aim of this study was to determine the influence of PCB on liver function and morphology in a cohort of former PCB exposed workers. Over 5 years, a longitudinal analysis of the association between PCB concentration and hepatic transaminases such as alanine transaminase (ALT) aspartate amino transaminase (AST) and gamma glutamyltransferase (γGT), as well as liver size and structure was undertaken. Data demonstrated a significant inverse association between PCB concentration and γGT activity levels but there was no marked relationship with AST and ALT activities. Regarding sonographic examination, a significant association was found between liver size and PCB concentration. This association remained, even after adjusting for alcohol consumption, liver affecting drugs, timespan of internal exposure, or age. No marked correlation was noted between PCB concentration and liver structure changes. In summary, an association was observed between PCB concentration and γGT activity levels as well as liver size in humans. The long-term health consequences attributed to PCB on liver and in particular in tumorigenesis are not foreseeable in our cohort thus far, but remain a focus in further ongoing surveillance.
DOI: 10.7284/110221
title: Gravimeter data collected during research cruise MV1210 using a Bell BGM-3 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.15131/shef.data.7442645.v1
title: Data for "Personalised 3D knee compliance from clinically viable knee laxity measurements: A proof of concept ex vivo experiment"

description: Data pertaining to:Lamberto, G., Amin, D., Solomon, B., Reynolds, K., Mazzà, C., Martelli, S. (In Submission), "Personalized 3D knee compliance from clinically viable knee laxity measurements: a proof of ex vivo experiment", Medical Engineering & Physics<br>
DOI: 10.7284/110214
title: Gyrocompass data collected during research cruise MV1210 using a SGB Meridian instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7442609
title: Baluk cave (NW China) Holocene speleothem oxygen isotope data

description: Data of Holocene oxygen isotope record from Baluk cave, NW China. U-Th dates and oxygen isotope time series vs. depths and ages of two stalagmites are included. Original reference: Liu, X., Rao, Z., Shen, C.C., Liu, J., Chen, J., Chen, S., Wang, X., Chen, F., 2019. Holocene solar activity imprint on centennial‐ to multidecadal‐scale hydroclimatic oscillations in arid central Asia. <i>Journal of Geophysical Research: Atmospheres</i> 124, 2562-2573.
DOI: 10.6084/m9.figshare.7442915.v3
title: A synthesis of global change manipulative experiments: What have we learned?

description: Database for the manuscript entitled "A synthesis of global change manipulative experiments: What have we learned?", which is currently under revision in Nature Ecology & Evolution.
DOI: 10.7284/110213
title: INS (Inertial Navigation System) data collected during research cruise MV1210 using a TSS TSS Orion instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7442609.v1
title: Baluk cave (NW China) Holocene oxygen isotope data

description: Data of Holocene oxygen isotope record from Baluk cave, NW China. U-Th dates and oxygen isotope time series vs. depths and ages of two stalagmites are included. Original reference: Liu, X.K., Rao, Z.G., Shen, C.-C., Liu, J.B., Chen, J.H., Chen, S.Q., Wang, X.F., Chen, F.H.. Holocene solar activity imprint on centennial- to multidecadal-scale hydroclimatic oscillations in arid central Asia. Journal of Geophysical Research-Atmospheres, <i>under revision</i>.
DOI: 10.7284/114665
title: INS (Inertial Navigation System) data collected during research cruise MV1210 using a CodaOctopus F-185 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7442915.v4
title: A synthesis of 1090 global change manipulative experiments: What have we learned?

description: Database for the manuscript entitled "A synthesis of 1090 global change manipulative experiments: What have we learned?", which is currently under revision in Nature Ecology & Evolution.
DOI: 10.6084/m9.figshare.7442915.v5
title: A meta-analysis of 1119 manipulative experiments on terrestrial carbon cycling responses to global change

description: Database for the manuscript entitled "A meta-analysis of 1119 manipulative experiments on terrestrial carbon cycling responses to global change", which is currently under revision in Nature Ecology & Evolution.
DOI: 10.7284/115498
title: Meteorological Station data collected during research cruise MV1210 using a SIO MET-System instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7442609.v2
title: Baluk cave (NW China) Holocene oxygen isotope data

description: Data of Holocene oxygen isotope record from Baluk cave, NW China. U-Th dates and oxygen isotope time series vs. depths and ages of two stalagmites are included. Original reference: Liu, X., Rao, Z., Shen, C.C., Liu, J., Chen, J., Chen, S., Wang, X., Chen, F., 2019. Holocene solar activity imprint on centennial‐ to multidecadal‐scale hydroclimatic oscillations in arid central Asia. <i>Journal of Geophysical Research: Atmospheres</i> 124, 2562-2573.
DOI: 10.6084/m9.figshare.7442609.v4
title: Baluk cave (NW China) Holocene speleothem oxygen isotope data

description: Data of Holocene oxygen isotope record from Baluk cave, NW China. U-Th dates and oxygen isotope time series vs. depths and ages of two stalagmites are included. Original reference: Liu, X., Rao, Z., Shen, C.C., Liu, J., Chen, J., Chen, S., Wang, X., Chen, F., 2019. Holocene solar activity imprint on centennial‐ to multidecadal‐scale hydroclimatic oscillations in arid central Asia. <i>Journal of Geophysical Research: Atmospheres</i> 124, 2562-2573.
DOI: 10.7284/110215
title: Multibeam Echosounder data collected during research cruise MV1210 using a Kongsberg EM122 instrument system onboard the platform RV Melville

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7442609.v3
title: Baluk cave (NW China) Holocene oxygen isotope data

description: Data of Holocene oxygen isotope record from Baluk cave, NW China. U-Th dates and oxygen isotope time series vs. depths and ages of two stalagmites are included. Original reference: Liu, X., Rao, Z., Shen, C.C., Liu, J., Chen, J., Chen, S., Wang, X., Chen, F., 2019. Holocene solar activity imprint on centennial‐ to multidecadal‐scale hydroclimatic oscillations in arid central Asia. <i>Journal of Geophysical Research: Atmospheres</i> 124, 2562-2573.
DOI: 10.6084/m9.figshare.7442915.v6
title: A meta-analysis of 1119 manipulative experiments on terrestrial carbon cycling responses to global change

description: Database for the manuscript entitled "A meta-analysis of 1119 manipulative experiments on terrestrial carbon cycling responses to global change", which is accepted by Nature Ecology & Evolution.