cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3ku9yy
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-89.5992 6.97482,-88.24373 -0.10375,-76.04449 1.55294,-74.37629 5.45136,-73.51199 7.14172,-71.77338 11.01526,-70.71258 12.0888,-70.65576 16.76036,-82.1516 15.99363,-82.18049 10.15461,-78.18231 9.44271,-77.5144 8.85861,-79.90684 6.92658,-89.5992 6.97482))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hypoplectrus providencianus Acero P. & Garzón-Ferreira, 1994"
 ]
}

 The dataset includes 38 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0280018-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c9yqd7
title: Occurrence Download

description: A dataset containing 59225 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Austria",
 {
 "or" : [
 "Geometry POLYGON((16.45268 48.12012,16.61196 48.12012,16.61196 48.19688,16.61196 48.24126,16.45268 48.24126,16.45268 48.12012))",
 "Geometry POLYGON((16.60546 48.09772,17.04751 48.09772,17.04751 48.18672,16.60546 48.18672,16.60546 48.09772))"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 59225 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182751-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cc3gwv
title: Occurrence Download

description: A dataset containing 185 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Argentina",
 "TaxonKey is Sappho sparganurus (Shaw, 1812)"
 ]
}

 The dataset includes 185 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182759-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bz72mc
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Halimolobos henricksonii (Rollins) Al-Shehbaz & C.D.Bailey"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237150-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ymahq5
title: Occurrence Download

description: A dataset containing 3251566 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence, Material sample, Material citation)",
 "Continent is Europe",
 "CoordinateUncertaintyInMeters is less than or equal to 5000.0",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Carnivora, Artiodactyla, Perissodactyla)"
 ]
}

 The dataset includes 3251566 records from 2746 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260805-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ub2kqb
title: Occurrence Download

description: A dataset containing 25377 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pyracantha coccinea M.Roem.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 25377 records from 241 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0299607-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7jjxd3
title: Occurrence Download

description: A dataset containing 2463015 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Philippines"
 ]
}

 The dataset includes 2463015 records from 1845 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067847-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a9cahp
title: Occurrence Download

description: A dataset containing 2851 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Heterogenea robinsoni (Viette, 1965), Heterogenea asella (Denis & Schiffermüller), 1776, Heterogenea asella (Denis & Schiffermüller), 1776, Heterogenea robinsoni (Viette, 1965), Heterogenea asella (Denis & Schiffermüller), 1776, Heterogenea asella (Denis & Schiffermüller), 1776, Heterogenea asella (Denis & Schiffermüller), 1776, Heterogenea shurtleffi Packard, 1864, Heterogenea robinsoni (Viette, 1965), Heterogenea asella (Denis & Schiffermüller), 1776, Heterogenea asella (Denis & Schiffermüller), 1776)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2851 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004213-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b27nwc
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Material sample, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Litopenaeus vannamei"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011115-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.grtc29
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Eucyclodes sanguilineata",
 "Year 2008-2025"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011116-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5j8gyh
title: Occurrence Download

description: A dataset containing 121457 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prunus cerasifera"
 ]
}

 The dataset includes 121457 records from 798 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011042-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uffx6m
title: Occurrence Download

description: A dataset containing 533343 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is OMN",
 "Year is greater than or equal to 1970"
 ]
}

 The dataset includes 533343 records from 224 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011048-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30195814
title: <i>The EF-IPS Model of External Factors Influencing the Teaching of Information Problem Solving in Higher Education</i>

description: The EF-IPS Model (External Factors Influencing Information Problem Solving) synthesizes practitioner perspectives on conditions shaping the teaching of Information Problem Solving (IPS) in higher education. Drawing on survey and focus group data from 63 academic librarians, the model identifies six interrelated factors: student, faculty, and librarian characteristics; librarian–faculty cooperation; librarian–student cooperation; and the broader learning environment. These external factors influence the ease of implementing seven evidence-based IPS design principles as identified by Boetje et al. (2025). Findings highlight that embedded instruction and authentic task design depend heavily on faculty collaboration and curricular integration, while learning environment constraints such as time, group size, and disciplinary domain further shape feasibility. The EF-IPS Model provides a framework for analyzing contextual influences and guiding the effective adoption of IPS instruction.
DOI: 10.6084/m9.figshare.30195814.v1
title: <i>The EF-IPS Model of External Factors Influencing the Teaching of Information Problem Solving in Higher Education</i>

description: The EF-IPS Model (External Factors Influencing Information Problem Solving) synthesizes practitioner perspectives on conditions shaping the teaching of Information Problem Solving (IPS) in higher education. Drawing on survey and focus group data from 63 academic librarians, the model identifies six interrelated factors: student, faculty, and librarian characteristics; librarian–faculty cooperation; librarian–student cooperation; and the broader learning environment. These external factors influence the ease of implementing seven evidence-based IPS design principles as identified by Boetje et al. (2025). Findings highlight that embedded instruction and authentic task design depend heavily on faculty collaboration and curricular integration, while learning environment constraints such as time, group size, and disciplinary domain further shape feasibility. The EF-IPS Model provides a framework for analyzing contextual influences and guiding the effective adoption of IPS instruction.
DOI: 10.34740/kaggle/dsv/13155444
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.yds9vt
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sarracenia purpurea",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011117-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/bvfvjt
title: Oil-water intephase microbial community analysis Raw sequence reads

description: Following the succession of microbial community changes at oil-seawater interphase during oil degradation
DOI: 10.15468/xja64s
title: MiSeq 16S rRNA gene (archaeal 16S rRNA gene) sequences of 4 SCS sediments

description: DNA from 4 SCS sediments have been extracted and amplified by 21f/958r & Arch347F/Arch806R primer pairs (for archaeal 16S rRNA gene). The archaeal communities of these 4 samples were obtained.
DOI: 10.15468/dd.czy59n
title: Dataset generated from Esri tool

description: Derived dataset generated by Esri geoprocessing tool using GBIF API
DOI: 10.15468/dl.296jjt
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sarracenia purpurea",
 "Country is Czechia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 16 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011118-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.258apq
title: Occurrence Download

description: A dataset containing 2028 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Cinnamomum camphora"
 ]
}

 The dataset includes 2028 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011112-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/2mwteb
title: zooplankton environmental sample Metagenome

description: COI sequences of Zooplankton in Lake Tai Metagenome
DOI: 10.15468/dl.sq953a
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sarracenia purpurea",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 68 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011119-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/36hova
title: Bacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia

description: Populations on small islands surrounded by coral reefs often heavily depend on these reefs. The health and recovery of reefs are strongly influenced by recruitment of coral larvae. Their settlement relies on cues such as those emitted from bacterial communities forming biofilms on reef surfaces. Environmental conditions can change these bacterial community compositions (BCC) and may in turn affect settlement of coral larvae. We investigated BCC and coral larvae settlement at three small inhabited islands with different distance from the mainland in the Spermonde Archipelago, Indonesia. BCC and recruitment were analyzed on artificial ceramic tiles after 2-8 weeks exposure time and on natural reef substrate. Environmental analysis showed a clear separation in water parameters between inshore and near-shore/mid-shelf sites, as well as distinct benthic communities at all of the three sites. No coral recruitment was observed at the inshore site with highest anthropogenic impact. At the other two sites coral recruitment occurred on natural surfaces (recruits per 100 cm2: 0.73 ± 1.75 near-shore, 0.90 ± 1.97 mid-shelf), but there was no significant difference between the two sites. On artificial substrates coral recruitment differed between these two sites, with tile orientation and with exposure time of the tiles in the reef. The most abundant bacteria on both substrates were Gammaproteobacteria, Alphaproteobacteria and Cyanobacteria. BCC was strongly correlated with water quality and significant differences in BCC between the inshore site and near-shore/mid-shelf were found. On artificial substrates there was a significant difference in BCC with exposure time in the reef. Furthermore, bacterial communities on artificial tiles showed changes in their composition after being subjected to higher water temperatures in an experimental setting. We demonstrate how changes in water quality and temperature can affect BCC in coral reefs, which in turn could affect coral recruitment. Small islands such as these investigated feature a high spatial variability, as seen e.g. in environmental gradients, differences in BCC or in coral recruitment. Our study highlights the value of taking both BCC and coral recruitment into account in addition to the environmental conditions, when considering the recovery potential of coral reefs.
DOI: 10.6084/m9.figshare.30195847
title: <b>Digital twin-driven dynamic optimization of flexible job shop scheduling considering operations outsourcing</b>

description: This is the experimental data of the manuscript entitled "Digital twin-driven dynamic optimization of flexible job shop scheduling considering operations outsourcing".
DOI: 10.6084/m9.figshare.30195847.v1
title: <b>Digital twin-driven dynamic optimization of flexible job shop scheduling considering operations outsourcing</b>

description: This is the experimental data of the manuscript entitled "Digital twin-driven dynamic optimization of flexible job shop scheduling considering operations outsourcing".
DOI: 10.15468/wdm6jc
title: PCE/TCE dechlorinating microbial community and dehalogenase genes from Wonju Stream, South Korea

description: Groundwater at an industrial complex in Wonju remains contaminated with TCE despite several attempts at remediation over the last 15 years. Since the microbial dechlorination intermediates cis-DCE and VC were detected in the down-stream groundwater, we investigated whether the indigenous microbial communities could convert chloroethenes to ethene making bioremediation potentially feasible. Pyrosequencing of the 16S rRNA genes showed that Geobacter, Desulfuromonas, and Dehalococcoides populations grew significantly during the time PCE and TCE were converted to ethene. Most 16S rRNA sequences of Dehalococcoides spp. were phylogenetically close to known Dehalococcoides sp. strains, however about 10% of sequences were quite distant from the previously characterized Dehalococcoides sp. (97% or less sequence identity). Bellininea and Longilinea populations, which belong to Chloroflexi, also grew during the dechlorination phase.
DOI: 10.15468/dl.qnztbn
title: Occurrence Download

description: A dataset containing 40764 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (function (name, pos = -1, envir = as.environment(pos), all.names = FALSE, pattern, sorted = TRUE) \n{\n if (!missing(name)) {\n pos &lt;- tryCatch(name, error = function(e) e)\n if (inherits(pos, \"error\")) {\n name &lt;- substitute(name)\n if (!is.character(name)) \n name &lt;- deparse(name)\n warning(gettextf(\"%s converted to character string\", sQuote(name)), domain = NA)\n pos &lt;- name\n }\n }\n all.names &lt;- .Internal(ls(envir, all.names, sorted))\n if (!missing(pattern)) {\n if ((ll &lt;- length(grep(\"[\", pattern, fixed = TRUE))) && ll != length(grep(\"]\", pattern, fixed = TRUE))) {\n if (pattern == \"[\") {\n pattern &lt;- \"\\\\[\"\n warning(\"replaced regular expression pattern '[' by '\\\\\\\\['\")\n }\n else if (length(grep(\"[^\\\\\\\\]\\\\[&lt;-\", pattern))) {\n pattern &lt;- sub(\"\\\\[&lt;-\", \"\\\\\\\\\\\\[&lt;-\", pattern)\n warning(\"replaced '[&lt;-' by '\\\\\\\\[&lt;-' in regular expression pattern\")\n }\n }\n grep(pattern, all.names, value = TRUE)\n }\n else all.names\n}, Bidens pilosa, Ageratina adenophora, Chromolaena odorata, Praxelis clematidea, Leucaena leucocephala, Mimosa diplotricha, Trifolium repens, Oenothera biennis, Malvastrum coromandelianum, Amaranthus blitum, Amaranthus viridis, Opuntia dillenii, Solanum erianthum, Synedrella nodiflora, Sphagneticola trilobata, Tridax procumbens, Calopogonium mucunoides, Euphorbia hypericifolia, Euphorbia peplus, Phyllanthus amarus, Waltheria indica, Sieruela rutidosperma, Mitracarpus hirtus, Coreopsis lanceolata)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 40764 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011120-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvdh6q
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pipistrellus nathusii",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "Country is Spain",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 },
 "DistanceFromCentroidInMeters is greater than or equal to 1000",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2015",
 "Month is not null"
 ]
}

 The dataset includes 130 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011121-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/tu5bvf
title: Taxonomic study of endospores in a marine sediment

description: This study mapped the taxonomy and diversity of endospores and vegetative bacteria in a marine sediment. We further investigated potential sources of endospore accumulation in the seabed.
DOI: 10.15468/rguc4r
title: Soil metagenome from healthy and unhealthy agricultural soil

description: Soil samples were collected from healthy and unhealthy agricultural soil. Soil health was determined based on plant productivity and farmer's perception. DNA was extracted and subjected to metagenome sequencing.
DOI: 10.15468/2ve69k
title: Eukaryotic metabarcoding (18S rRNA V9 region) of environmental DNA from an archived marine sediment record, Skagerrak, North Sea, spanning 8000 years

description: This is a dataset associated with the following publication.

Holman LE, Zampirolo G, Gyllencreutz R, Scourse J, Frøslev T, Carøe C, Gopalakrishnan S, Pedersen MW, Bohmann K. (2025) Navigating past oceans: comparing metabarcoding and metagenomics of marine ancient sediment environmental DNA. Molecular Ecology Resources. DOI: 10.1111/1755-0998.14086

https://doi.org/10.1111/1755-0998.14086

The condition of ancient marine ecosystems provides context for contemporary biodiversity changes in human-­ impacted oceans.
Sequencing sedimentary ancient DNA (sedaDNA) is an emerging method for generating high-­ resolution biodiversity time-­ series
data, offering insights into past ecosystems. However, few studies directly compare the two predominant sedaDNA sequencing
approaches: metabarcoding and shotgun-­ metagenomics, and it remains unclear if these methodological differences affect diver-
sity metrics. We compared these methods using sedaDNA from an archived marine sediment record sampled in the Skagerrak,
North Sea, spanning almost 8000 years. We performed metabarcoding of a eukaryotic 18S rRNA region (V9) and sequenced
153–229 million metagenomic reads per sample. Our results show limited overlap between metabarcoding and metagenomics,
with only three metazoan genera detected by both methods. For overlapping taxa, metabarcoding detections became inconsistent
for samples older than 2000 years, while metagenomics detected taxa throughout the time series. We observed divergent patterns
of alpha diversity, with metagenomics indicating decreased richness towards the present and metabarcoding showing an in-
crease. However, beta diversity patterns were similar between methods, with discrepancies only in metazoan data comparisons.
Our findings demonstrate that the choice of sequencing method significantly impacts detected biodiversity in an ancient marine
sediment record. While we stress that studies with limited variation in DNA degradation among samples may not be strongly
affected, researchers should exonerate methodological explanations for observed biodiversity changes in marine sediment cores,
particularly when considering alpha diversity, before making ecological interpretations.[This dataset was processed using the GBIF Metabarcoding Data Toolkit.]
DOI: 10.15468/yo2clo
title: Sediment samples Raw sequence reads

description: the Sediment samples and background Environmental microbial diversity
DOI: 10.15468/dl.yn7ny4
title: Occurrence Download

description: A dataset containing 20905 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "HasCoordinate is true",
 "Year is 1903"
 ]
}

 The dataset includes 20905 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011114-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.