cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12926435.v1
title: Additional file 7 of The Tug1 lncRNA locus is essential for male fertility

description: Additional file 7: Table S3. Prostate, spleen, eyes, brain, heart, liver, and MEF RNA-seq.
DOI: 10.6084/m9.figshare.12926447.v1
title: Additional file 1 of Association between sexual violence and unintended pregnancy among adolescent girls and young women in South Africa

description: Additional file 1. Study questionnaire.
DOI: 10.6084/m9.figshare.12926442
title: Additional file 1 of Technical and environmental characterization of dual-purpose cattle farms and ways of improving production: A case study in Colombia

description: Additional file 1: Table S1. Contingency table for the categorical variables included in the FAMD analysis of each component evaluated. Table S2. Contribution of each variable to the construction of the first two dimensions in each FAMD analysis in terms of Square Cosine. Table S3. Coding of categorical and numerical variables by component.
DOI: 10.6084/m9.figshare.12926441.v1
title: Additional file 9 of The Tug1 lncRNA locus is essential for male fertility

description: Additional file 9: Table S5. Allele-specific RNA-seq in testes, differentially expressed genes.
DOI: 10.6084/m9.figshare.12926442.v1
title: Additional file 1 of Technical and environmental characterization of dual-purpose cattle farms and ways of improving production: A case study in Colombia

description: Additional file 1: Table S1. Contingency table for the categorical variables included in the FAMD analysis of each component evaluated. Table S2. Contribution of each variable to the construction of the first two dimensions in each FAMD analysis in terms of Square Cosine. Table S3. Coding of categorical and numerical variables by component.
DOI: 10.6084/m9.figshare.12926447
title: Additional file 1 of Association between sexual violence and unintended pregnancy among adolescent girls and young women in South Africa

description: Additional file 1. Study questionnaire.
DOI: 10.6084/m9.figshare.12926471
title: Additional file 5 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 5: Table S7. Spearman correlation between average DNA methylation in EZH2/SUZ12 region set and cancer stage for each cancer type.
DOI: 10.6084/m9.figshare.12926471.v1
title: Additional file 5 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 5: Table S7. Spearman correlation between average DNA methylation in EZH2/SUZ12 region set and cancer stage for each cancer type.
DOI: 10.6084/m9.figshare.12926456.v1
title: Additional file 1 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 1: Tables S1-S4, Tables S11-S12, Tables S14-S15. COCOA region set scores for the corresponding analysis. Table S1. BRCA DNA methylation data. Table S2. BRCA ATAC-seq data. Table S3. CLL multi-omics analysis. Table S4. KIRC cancer stage analysis. Table S11. Results for simulated DNA methylation data with low noise level. Table S12. Results for simulated DNA methylation data with high noise level. Table S14. BRCA DNA methylation data with median scoring method, Table S15. BRCA DNA methylation data when using loadings as FCSs.
DOI: 10.6084/m9.figshare.12926474.v1
title: Additional file 6 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 6: Table S8. Association between average DNA methylation level in EZH2/SUZ12-binding regions and cancer stage or patient survival.
DOI: 10.6084/m9.figshare.12926456
title: Additional file 1 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 1: Tables S1-S4, Tables S11-S12, Tables S14-S15. COCOA region set scores for the corresponding analysis. Table S1. BRCA DNA methylation data. Table S2. BRCA ATAC-seq data. Table S3. CLL multi-omics analysis. Table S4. KIRC cancer stage analysis. Table S11. Results for simulated DNA methylation data with low noise level. Table S12. Results for simulated DNA methylation data with high noise level. Table S14. BRCA DNA methylation data with median scoring method, Table S15. BRCA DNA methylation data when using loadings as FCSs.
DOI: 10.6084/m9.figshare.12926477
title: Additional file 7 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 7: Table S9. Results from Cox proportional hazards model for each cancer type that tested the relationship of average DNA methylation in the EZH2/SUZ12 region set with overall patient survival.
DOI: 10.6084/m9.figshare.12926468
title: Additional file 4 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 4: Table S6. Results from Cox proportional hazards model for the three training models and three validation models that tested the relationship of average DNA methylation in each region set with overall patient survival.
DOI: 10.6084/m9.figshare.12926457.v1
title: Additional file 10 of Associations of maternal early-pregnancy blood glucose and insulin concentrations with DNA methylation in newborns

description: Additional file 10: Table S11. Look-up results of adult type 2 diabetes associated CpGs in maternal early-pregnancy glucose EWAS results.
DOI: 10.6084/m9.figshare.12926465.v1
title: Additional file 3 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 3: Table S5. Spearman correlation between average DNA methylation in each region set and KIRC cancer stage for training and validation data.
DOI: 10.6084/m9.figshare.12926480.v1
title: Additional file 8 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 8: Table S10. LOLA results from differentially methylated regions from simulated DNA methylation data with low noise.
DOI: 10.6084/m9.figshare.12926460.v1
title: Additional file 11 of Associations of maternal early-pregnancy blood glucose and insulin concentrations with DNA methylation in newborns

description: Additional file 11: Table S12. Look-up results of adult type 2 diabetes associated CpGs in maternal early-pregnancy insulin EWAS results.
DOI: 10.6084/m9.figshare.12926474
title: Additional file 6 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 6: Table S8. Association between average DNA methylation level in EZH2/SUZ12-binding regions and cancer stage or patient survival.
DOI: 10.6084/m9.figshare.12926483
title: Additional file 9 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 9: Table S13.. COCOA and chromVAR results for breast cancer ATAC-seq data using chromVAR motif database.
DOI: 10.6084/m9.figshare.12926483.v1
title: Additional file 9 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 9: Table S13.. COCOA and chromVAR results for breast cancer ATAC-seq data using chromVAR motif database.
DOI: 10.6084/m9.figshare.12926457
title: Additional file 10 of Associations of maternal early-pregnancy blood glucose and insulin concentrations with DNA methylation in newborns

description: Additional file 10: Table S11. Look-up results of adult type 2 diabetes associated CpGs in maternal early-pregnancy glucose EWAS results.
DOI: 10.6084/m9.figshare.12926468.v1
title: Additional file 4 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 4: Table S6. Results from Cox proportional hazards model for the three training models and three validation models that tested the relationship of average DNA methylation in each region set with overall patient survival.
DOI: 10.6084/m9.figshare.12926480
title: Additional file 8 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 8: Table S10. LOLA results from differentially methylated regions from simulated DNA methylation data with low noise.
DOI: 10.6084/m9.figshare.12926493
title: Additional file 9 of Associations of maternal early-pregnancy blood glucose and insulin concentrations with DNA methylation in newborns

description: Additional file 9: Table S10. Look-up results of maternal glucose metabolism associated CpGs in maternal early-pregnancy insulin EWAS results.
DOI: 10.6084/m9.figshare.12926460
title: Additional file 11 of Associations of maternal early-pregnancy blood glucose and insulin concentrations with DNA methylation in newborns

description: Additional file 11: Table S12. Look-up results of adult type 2 diabetes associated CpGs in maternal early-pregnancy insulin EWAS results.
DOI: 10.6084/m9.figshare.12926490.v1
title: Additional file 8 of Associations of maternal early-pregnancy blood glucose and insulin concentrations with DNA methylation in newborns

description: Additional file 8: Table S9. Look-up results of maternal glucose metabolism associated CpGs in maternal early-pregnancy glucose EWAS results.
DOI: 10.6084/m9.figshare.12926493.v1
title: Additional file 9 of Associations of maternal early-pregnancy blood glucose and insulin concentrations with DNA methylation in newborns

description: Additional file 9: Table S10. Look-up results of maternal glucose metabolism associated CpGs in maternal early-pregnancy insulin EWAS results.
DOI: 10.6084/m9.figshare.12926490
title: Additional file 8 of Associations of maternal early-pregnancy blood glucose and insulin concentrations with DNA methylation in newborns

description: Additional file 8: Table S9. Look-up results of maternal glucose metabolism associated CpGs in maternal early-pregnancy glucose EWAS results.
DOI: 10.6084/m9.figshare.12926501
title: Additional file 12 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 12: Additional Data 1. Summary statistics of the relative abundance of family in each sample.
DOI: 10.6084/m9.figshare.12926477.v1
title: Additional file 7 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 7: Table S9. Results from Cox proportional hazards model for each cancer type that tested the relationship of average DNA methylation in the EZH2/SUZ12 region set with overall patient survival.
DOI: 10.6084/m9.figshare.12926465
title: Additional file 3 of COCOA: coordinate covariation analysis of epigenetic heterogeneity

description: Additional file 3: Table S5. Spearman correlation between average DNA methylation in each region set and KIRC cancer stage for training and validation data.
DOI: 10.6084/m9.figshare.12926495
title: Additional file 10 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 10: Supplementary Table 6. The taxonomic assignment of the ASVs in the intersections of beef animals which are displayed in Supplementary Fig. 3.
DOI: 10.6084/m9.figshare.12926501.v1
title: Additional file 12 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 12: Additional Data 1. Summary statistics of the relative abundance of family in each sample.
DOI: 10.6084/m9.figshare.12926519
title: Additional file 5 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 5: Supplementary Table 1. Summary of sequencing and alpha-diversity analysis for each sample. ASV = assigned sequence variants. Only samples which exceeded the rarefaction threshold of 12,000 reads were included in the Shannon diversity index calculation.
DOI: 10.6084/m9.figshare.12926522
title: Additional file 6 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 6: Supplementary Table 2. The taxonomic assignment of the ASVs in the intersections of beef animals which are displayed in Fig. 5.
DOI: 10.6084/m9.figshare.12926495.v1
title: Additional file 10 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 10: Supplementary Table 6. The taxonomic assignment of the ASVs in the intersections of beef animals which are displayed in Supplementary Fig. 3.
DOI: 10.6084/m9.figshare.12926528
title: Additional file 8 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 8: Supplementary Table 4. The taxonomic assignment of the ASVs in the intersections of beef animals which are displayed in Fig. 6.
DOI: 10.6084/m9.figshare.12926498.v1
title: Additional file 11 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 11: Supplementary Table 7. The taxonomic assignment of the ASVs in the intersections of dairy animals which are displayed in Supplementary Fig. 3.
DOI: 10.6084/m9.figshare.12926522.v1
title: Additional file 6 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 6: Supplementary Table 2. The taxonomic assignment of the ASVs in the intersections of beef animals which are displayed in Fig. 5.
DOI: 10.6084/m9.figshare.12926525.v1
title: Additional file 7 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 7: Supplementary Table 3. The taxonomic assignment of the ASVs in the intersections of dairy animals which are displayed in Fig. 5.
DOI: 10.6084/m9.figshare.12926531
title: Additional file 9 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 9: Supplementary Table 5. The taxonomic assignment of the ASVs in the intersections of dairy animals which are displayed in Fig. 6.
DOI: 10.6084/m9.figshare.12926519.v1
title: Additional file 5 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 5: Supplementary Table 1. Summary of sequencing and alpha-diversity analysis for each sample. ASV = assigned sequence variants. Only samples which exceeded the rarefaction threshold of 12,000 reads were included in the Shannon diversity index calculation.
DOI: 10.6084/m9.figshare.12926528.v1
title: Additional file 8 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 8: Supplementary Table 4. The taxonomic assignment of the ASVs in the intersections of beef animals which are displayed in Fig. 6.
DOI: 10.6084/m9.figshare.12926498
title: Additional file 11 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 11: Supplementary Table 7. The taxonomic assignment of the ASVs in the intersections of dairy animals which are displayed in Supplementary Fig. 3.
DOI: 10.6084/m9.figshare.12926525
title: Additional file 7 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 7: Supplementary Table 3. The taxonomic assignment of the ASVs in the intersections of dairy animals which are displayed in Fig. 5.
DOI: 10.6084/m9.figshare.12926531.v1
title: Additional file 9 of Maternal influences on oral and faecal microbiota maturation in neonatal calves in beef and dairy production systems

description: Additional file 9: Supplementary Table 5. The taxonomic assignment of the ASVs in the intersections of dairy animals which are displayed in Fig. 6.
DOI: 10.6084/m9.figshare.12926547
title: Additional file 1 of A large deletion in the COL2A1 gene expands the spectrum of pathogenic variants causing bulldog calf syndrome in cattle

description: Additional file 1. EBI Accession numbers of all publicly available genome sequences. We compared the genotypes of the calf with 494 cattle genomes of various breeds that had been sequenced in the course of other ongoing studies and that were publicly available.
DOI: 10.6084/m9.figshare.12926550.v1
title: Additional file 2 of A large deletion in the COL2A1 gene expands the spectrum of pathogenic variants causing bulldog calf syndrome in cattle

description: Additional file 2. List of the remaining private protein-coding variants after comparison of the genotypes of the calf with 494 cattle genome. A total of 20 private protein-changing single-nucleotide or short indel variants with a moderate or high predicted impact, located within 19 different genes or loci, were identified.
DOI: 10.6084/m9.figshare.12926547.v1
title: Additional file 1 of A large deletion in the COL2A1 gene expands the spectrum of pathogenic variants causing bulldog calf syndrome in cattle

description: Additional file 1. EBI Accession numbers of all publicly available genome sequences. We compared the genotypes of the calf with 494 cattle genomes of various breeds that had been sequenced in the course of other ongoing studies and that were publicly available.
DOI: 10.6084/m9.figshare.12926550
title: Additional file 2 of A large deletion in the COL2A1 gene expands the spectrum of pathogenic variants causing bulldog calf syndrome in cattle

description: Additional file 2. List of the remaining private protein-coding variants after comparison of the genotypes of the calf with 494 cattle genome. A total of 20 private protein-changing single-nucleotide or short indel variants with a moderate or high predicted impact, located within 19 different genes or loci, were identified.
DOI: 10.6084/m9.figshare.12926562.v1
title: Additional file 2 of Does new instrument for Oxford unicompartmental knee arthroplasty improve short-term clinical outcome and component alignment? A meta-analysis

description: Additional file 2.
DOI: 10.6084/m9.figshare.12926562
title: Additional file 2 of Does new instrument for Oxford unicompartmental knee arthroplasty improve short-term clinical outcome and component alignment? A meta-analysis

description: Additional file 2.
DOI: 10.6084/m9.figshare.12926583.v1
title: Additional file 2 of Teladorsagia circumcincta beta tubulin: the presence of the E198L polymorphism on its own is associated with benzimidazole resistance

description: Additional file 2: Table S2. Faecal egg count (FEC) mean per flock before and after treatment and results of the faecal egg count reduction test (FECRT) (%) and egg hatch test (EHT) (%). Results before treatment: pyrosequencing (% of each base and mean C and T), proportion of T. circumcincta carrying the leucine (LEU) amino acid at codon 198 (%) and species identification (%).
DOI: 10.6084/m9.figshare.12926589
title: Additional file 3 of Teladorsagia circumcincta beta tubulin: the presence of the E198L polymorphism on its own is associated with benzimidazole resistance

description: Additional file 3: Table S3. Results after treatment: pyrosequencing (% of each base and mean C and T), proportion of T. circumcincta carrying the leucine (LEU) amino acid at codon 198 (%) and species identification (%).
DOI: 10.6084/m9.figshare.12926583
title: Additional file 2 of Teladorsagia circumcincta beta tubulin: the presence of the E198L polymorphism on its own is associated with benzimidazole resistance

description: Additional file 2: Table S2. Faecal egg count (FEC) mean per flock before and after treatment and results of the faecal egg count reduction test (FECRT) (%) and egg hatch test (EHT) (%). Results before treatment: pyrosequencing (% of each base and mean C and T), proportion of T. circumcincta carrying the leucine (LEU) amino acid at codon 198 (%) and species identification (%).
DOI: 10.6084/m9.figshare.12926580
title: Additional file 1 of Teladorsagia circumcincta beta tubulin: the presence of the E198L polymorphism on its own is associated with benzimidazole resistance

description: Additional file 1: Table S1. Individual faecal egg count (FEC) before and after treatment per flock.
DOI: 10.6084/m9.figshare.12926580.v1
title: Additional file 1 of Teladorsagia circumcincta beta tubulin: the presence of the E198L polymorphism on its own is associated with benzimidazole resistance

description: Additional file 1: Table S1. Individual faecal egg count (FEC) before and after treatment per flock.
DOI: 10.6084/m9.figshare.12926589.v1
title: Additional file 3 of Teladorsagia circumcincta beta tubulin: the presence of the E198L polymorphism on its own is associated with benzimidazole resistance

description: Additional file 3: Table S3. Results after treatment: pyrosequencing (% of each base and mean C and T), proportion of T. circumcincta carrying the leucine (LEU) amino acid at codon 198 (%) and species identification (%).
DOI: 10.6084/m9.figshare.12911510.v1
title: msm_data_alcohol.sav

description: Alcohol consumption among men who have sex with men in Myanmar
DOI: 10.6084/m9.figshare.12911510
title: msm_data_alcohol.sav

description: Alcohol consumption among men who have sex with men in Myanmar
DOI: 10.6084/m9.figshare.11504715
title: Appendix S1. Database of literature and codebook

description: Cleaned database of conservation social psychology literature and associated codebook.
DOI: 10.6084/m9.figshare.11504715.v2
title: Appendix S1. Database of literature and codebook

description: Cleaned database of conservation social psychology literature and associated codebook.
DOI: 10.6084/m9.figshare.11504715.v1
title: Database of literature and codebook

description: Cleaned database of conservation social psychology literature and associated codebook.
DOI: 10.6084/m9.figshare.11504817
title: Appendix S2. Database of excluded literature

description: Database of literature excluded from systematic map exercise based on eligibility criteria.
DOI: 10.6084/m9.figshare.11504817.v2
title: Appendix S2. Database of excluded literature

description: Database of literature excluded from systematic map exercise based on eligibility criteria.
DOI: 10.6084/m9.figshare.11504817.v1
title: Database of excluded literature

description: Database of literature excluded from systematic map exercise based on eligibility criteria.
DOI: 10.6084/m9.figshare.11504847
title: Appendix S3. List of key terms and FTMs

description: List and analyses of the key terms coded and FTMs recorded for systematic map.
DOI: 10.6084/m9.figshare.11504847.v2
title: Appendix S3. List of key terms and FTMs

description: List and analyses of the key terms coded and FTMs recorded for systematic map.
DOI: 10.6084/m9.figshare.11504847.v1
title: List of key terms and FTMs

description: List and analyses of the key terms coded and FTMs recorded for systematic map.
DOI: 10.6084/m9.figshare.11504865
title: Appendix S4. List of journals

description: List and rankings of journals searched for systematic map of conservation social psychology.
DOI: 10.6084/m9.figshare.11504865.v2
title: Appendix S4. List of journals

description: List and rankings of journals searched for systematic map of conservation social psychology.
DOI: 10.6084/m9.figshare.11504865.v1
title: List of journals

description: List and rankings of journals searched for systematic map of conservation social psychology.
DOI: 10.6084/m9.figshare.11504886
title: Appendix S5. PRISMA statement

description: PRISMA statement for scoping review (systematic map).
DOI: 10.6084/m9.figshare.11504886.v2
title: Appendix S5. PRISMA statement

description: PRISMA statement for scoping review (systematic map).
DOI: 10.6084/m9.figshare.11504886.v1
title: PRISMA statement

description: PRISMA statement for scoping review (systematic map).
DOI: 10.6084/m9.figshare.11504931
title: Appendix S5. ROSES statement

description: ROSES statement for systematic map (scoping review).
DOI: 10.6084/m9.figshare.11504931.v2
title: Appendix S5. ROSES statement

description: ROSES statement for systematic map (scoping review).