cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20224151
title: Experiences of young girls and women undergoing ovarian tissue cryopreservation: a systematic review and thematic synthesis

description: The aim of this study was to explore the experiences of young girls and women who underwent or considered ovarian tissue cryopreservation (OTC) using a systematic review of qualitative studies with thematic synthesis framework. Major electronic databases: MEDLINE, EMBASE, the Cochrane Library, CINAHL and PsycINFO were searched from 1946 to May 2020 and reference lists of relevant articles were hand searched. Any studies that described a qualitative inquiry and highlighted the experiences of women with regards to OTC were included. Two independent reviewers screened the title and abstracts and made a selection against inclusion criteria. Main outcomes measures were experiences of women who have considered and/or undergone OTC, decision making in women who underwent or considered OTC and patient education. Nineteen studies were assessed for full text eligibility and four were included in analysis. 144 verbatim quotations from 85 participants in high income countries (UK, USA and Denmark) were included. Two studies adopted grounded theory approach, one phenomenology and one inductive content analysis. Four themes were generated; participants described their experiences as emotional, involving complex decision-making, helping them prepare for the long-term consequences of potentially losing their fertility and hormonal function, as well as their experience being educational. Additionally, the more practical aspects of the procedure such as OTC being invasive as well as costs implications were highlighted. Women and young girls are often involved in making time-sensitive decisions whether or not to undergo OTC. Healthcare professionals involved in the care of young girls and women undergoing this method need to also take into consideration the emotional wellbeing of the patients as well as the time and expertise it requires to help them make an informed decision.
DOI: 10.6084/m9.figshare.20224151.v1
title: Experiences of young girls and women undergoing ovarian tissue cryopreservation: a systematic review and thematic synthesis

description: The aim of this study was to explore the experiences of young girls and women who underwent or considered ovarian tissue cryopreservation (OTC) using a systematic review of qualitative studies with thematic synthesis framework. Major electronic databases: MEDLINE, EMBASE, the Cochrane Library, CINAHL and PsycINFO were searched from 1946 to May 2020 and reference lists of relevant articles were hand searched. Any studies that described a qualitative inquiry and highlighted the experiences of women with regards to OTC were included. Two independent reviewers screened the title and abstracts and made a selection against inclusion criteria. Main outcomes measures were experiences of women who have considered and/or undergone OTC, decision making in women who underwent or considered OTC and patient education. Nineteen studies were assessed for full text eligibility and four were included in analysis. 144 verbatim quotations from 85 participants in high income countries (UK, USA and Denmark) were included. Two studies adopted grounded theory approach, one phenomenology and one inductive content analysis. Four themes were generated; participants described their experiences as emotional, involving complex decision-making, helping them prepare for the long-term consequences of potentially losing their fertility and hormonal function, as well as their experience being educational. Additionally, the more practical aspects of the procedure such as OTC being invasive as well as costs implications were highlighted. Women and young girls are often involved in making time-sensitive decisions whether or not to undergo OTC. Healthcare professionals involved in the care of young girls and women undergoing this method need to also take into consideration the emotional wellbeing of the patients as well as the time and expertise it requires to help them make an informed decision.
DOI: 10.25810/00zk-yj28.43
title: Norwegian Newspaper Coverage of Climate Change or Global Warming, 2000-2022 - October 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.6073/pasta/ce48133f9a79dd313b1d5a158174ef29
title: North Temperate Lakes LTER: Manure Managment in Urbanizing Settings 2003 - 2004

description: The management of manure in urbanizing settings is a critical issue in the Lake Mendota watershed. The primary focus of this project was to examine the difficulties faced by livestock operations when managing manure on field systems that are fragmented by development. A survey regarding manure management was sent to Dane County, WI farms within the Lake Mendota watershed. The survey was conducted in two phases; March to May 2003 and March to May 2004. This dataset and accompanying survey entitled "Manure Management on the Urban Fringe" is available for users wishing to ascertain animal feeding operation size and management patterns in the Lake Mendota watershed. The data also include the distance from animal feeding operations to nearest urban centers via Euclidean (crow flies) and Road Network distances. Results suggest that exurban developments exert a strong influence on manure management routines of livestock producers. This influence is very local. Farmers in an urbanizing setting were more likely to encounter problems during manure hauling when the fields they were accessing were in close proximity to urban developments, regardless of their proximity to the urban core. The distances and times required to haul manure between the farm and the most distant field increased in the last five years. Land rental rates steadily increased at the same time that lease lengths shortened. Cash grain land tends to be sparse as livestock producers compete with developers for tracts on which to distribute manure. Manure brokering is a possible strategy to monitor land availability and coordinate manure placement between farms Cabot, P. E., S. K. Bowen, and P. J. Nowak. 2004. Manure management in urbanizing settings. Journal of Soil and Water Conservation 59:235-243. The survey "Manure Management on the Urban Fringe" was developed with assistance from Roger Schmidt and Charmaine Tryon-Petith with the Integrated Crop and Pest Management Program, University of Wisconsin-Madison. Number of sites: 83 farms
DOI: 10.25810/zb7c-gf43.34
title: Oceania Newspaper Coverage of Climate Change or Global Warming, 2000-2022 - October 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.25810/q1-ts57.26
title: Russian Newspaper Coverage of Climate Change or Global Warming, 2000-2022 - October 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.6073/pasta/3caf8934cff273d8eabd493836bd1633
title: Water column and sediment porewater nutrient concentrations from lagoon, river, and ocean sites along the Alaska Beaufort Sea coast, 2018-ongoing

description: Several water types (lagoon, river, ocean) and surface sediment porewater from the coastal Beaufort Sea system are sampled seasonally to investigate temporal and spatial shifts in nutrient dynamics. Surface and bottom water samples, and surface sediment samples are collected during full ice cover (April), ice break-up (mid-June to early July), and open water (late July and August) periods, and analyzed for ammonia (2018-2019) or ammonium (2021 on), nitrate + nitrite, orthophosphate, and silicate concentrations.
DOI: 10.25810/37f9-1j65.54
title: Spanish Newspaper Coverage of Climate Change or Global Warming, 2000-2022 - September 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.5281/zenodo.7335628
title: Dominis proteics PDZs extrets d'un conjunt de proteïnes proporcionat

description: Aquest conjunt de dades consta del llistat de <strong>dominis proteics</strong> <strong>PDZ</strong> que formen part d'un conjunt de proteïnes proporcionat, així com informació sobre aquests. Conté atributs detallats sobre el domini proteic desitjat, com la seva localització i la seva seqüència, així com informació general sobre la proteïna al qual pertany, com el seu nom, l’organisme i l’estat d'annotació. Tota aquesta informació s’obté a partir del repositori biològic <strong>UniProt</strong>, mitjançant tècniques <em>web scraping</em>.
description: S'han aplicat mètodes de web scraping per a l'extracció i tabulació de dades de dominis proteics de la base de dades biològica UniProt per a un conjunt de proteïnes seleccionades.
DOI: 10.5281/zenodo.7335627
title: Dominis proteics PDZs extrets d'un conjunt de proteïnes proporcionat

description: Aquest conjunt de dades consta del llistat de <strong>dominis proteics</strong> <strong>PDZ</strong> que formen part d'un conjunt de proteïnes proporcionat, així com informació sobre aquests. Conté atributs detallats sobre el domini proteic desitjat, com la seva localització i la seva seqüència, així com informació general sobre la proteïna al qual pertany, com el seu nom, l’organisme i l’estat d'annotació. Tota aquesta informació s’obté a partir del repositori biològic <strong>UniProt</strong>, mitjançant tècniques <em>web scraping</em>.
description: S'han aplicat mètodes de web scraping per a l'extracció i tabulació de dades de dominis proteics de la base de dades biològica UniProt per a un conjunt de proteïnes seleccionades.
DOI: 10.25810/37f9-1j65.55
title: Spanish Newspaper Coverage of Climate Change or Global Warming, 2000-2022 - October 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.6084/m9.figshare.8798999
title: CESM ocean pCO2 testbed

description: This dataset contains select variables from 25 randomly selected members from the CESM large ensemble (CESM-LENS). Each variable is interpolated from the native grid to a 1x1 degree lat/lon grid. The variables are monthly over the 1982-2017 time frame. Each variable has been sampled as the SOCATv5 data product. RCP8.5 is used after 2005. <br> The intent of this testbed is to evaluate ocean pCO2 gap-filling methods. <br> <strong>Extracting variables</strong> <em>&gt;&gt; unzip file.tar.gz</em> <br>
DOI: 10.25810/qt7k-6r09.42
title: Swedish Newspaper Coverage of Climate Change or Global Warming, 2000-2022 - October 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.22002/d1.978
title: PyCLES ISDAC intercomparison simulation

description: Input and output files of ISDAC LES intercomparison (Ovchinnikov et al., 2014) using PyCLES (Pressel et al. 2015).
DOI: 10.22002/d1.975
title: Tilt Corrected Ground Motion Dataset

description: Dataset includes raw, tilt-corrected, and zero-phase high-pass filtered (at different corner periods) acceleration time series for different recent earthquakes.
description: Related Publication:
NGA HIGH-PASS FILTERS REMOVE IMPORTANT REAL SIGNALS; SIMPLE TILT CORRECTION IS PREFERABLE.

Roh, Becky Caltech

Buyco, Kenny Caltech

Heaton, Tom Caltech

11th National Conference on Earthquake Engineering

2018-06-27
eng
DOI: 10.22002/d1.971
title: IHN GC Data from 2017 Caltech Roof Study

description: Isoprene hydroxynitrate isomer measurements observed with the GC-HR-ToF-CIMS during a 2017 field study located on the Caltech Library rooftop.
description: Contact person: Krystal Vasquez kvasquez@caltech.edu
DOI: 10.22002/d1.961
title: Processed sequence data as .csv from "Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria"

description: This contains all quality filtered sequence data as .csv files with each set of sequencing bins contained in a unique file.
description: Related Publication:
Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria

Nathan Belliveau Caltech

Proceedings of the National Academy of Science

2018-05-04

https://doi.org/10.1073/pnas.1722055115
eng
description: Contact person: Rob Phillips phillips@pboc.caltech.edu
DOI: 10.22002/d1.960
title: Processed data, code, and Jupiter notebooks from "Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria"

description: This contains all processed data sets used to construct expression shift plots and energy matrices, as well as several Jupiter notebooks associated with supplemental information of the work. Scripts used for data processing (in particular for .fastq files) are also included.
description: Related Publication:
Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria

Nathan Belliveau Caltech

Proceedings of the National Academy of Science

2018-05-04

https://doi.org/10.1073/pnas.1722055115
eng
description: Contact person: Rob Phillips phillips@pboc.caltech.edu
DOI: 10.22002/d1.947
title: Thesis Plate 2: Stratigraphic columns of the Zebra Nappe, Southern Naukluft Mountains, Namibia

description: Website containing stratigraphic columns for the southern Naukluft Mountains, Namibia.
DOI: 10.22002/d1.946
title: Thesis Plate 1: Preliminary geologic map of the southern Naukluft Mountains

description: Web map of the southern part of the Naukluft Mountains created from fieldwork in 2015 and 2016.
DOI: 10.25810/8196-e820.55
title: United Kingdom Newspaper Coverage of Climate Change or Global Warming, 2000-2022 - October 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.22002/d1.931
title: Human Magnetoreception Dataset 2

description: Data
description: Related Publication:
Transduction of the Geomagnetic Field as Evidenced from Alpha-band Activity in the Human Brain

eNeuro

https://doi.org/10.1523/ENEURO.0483-18.2019
eng
DOI: 10.22002/d1.930
title: Human Magnetoreception Dataset 1

description: Data
description: Related Publication:
Transduction of the Geomagnetic Field as Evidenced from Alpha-band Activity in the Human Brain

eNeuro

https://doi.org/10.1523/ENEURO.0483-18.2019
eng
DOI: 10.22002/d1.8975
title: Density of States Prediction for Materials Discovery via Contrastive Learning from Probabilistic Embeddings

description: Data related to the publication are provided as a single .zip that contains ascii, .csv, and .json files as well as .pkl, .npy, and .chkpt files referenced in the code repository available at TBD
description: Related Publication:
Density of states prediction for materials discovery via contrastive learning from probabilistic embeddings

Nature Communications

2022-02-17

https://doi.org/10.1038/s41467-022-28543-x
eng
DOI: 10.15468/jgg64h
title: Fish abundances for Troux aux Biches lagoon, Mauritius
DOI: 10.5517/ccdc.csd.cc24yfxg
title: CCDC 1994506: Experimental Crystal Structure Determination

description: Related Article: Rajendra Prasad Nandi, Chinna Ayya Swamy P, Pandi Dhanalakshmi, Santosh Kumar Behera, Pakkirisamy Thilagar|2021|Inorg.Chem.|60|5452|doi:10.1021/acs.inorgchem.0c02739
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.22002/d1.8969
title: bi183 VMH metadata

description: Cell Metadata csv for 10x VMH neurons from Kim et al. 2019
DOI: 10.22002/d1.8962
title: River floc data extracted from a river suspended sediment concentration-depth profile data compilation

description: The file "riverfloc_datacompilation.csv" contains the data in csv format. The file "metadata.txt" contains the metadata describing the data in the csv file.
description: Related Publication:
A Mechanistic Model for Mud Flocculation in Freshwater Rivers

Justin Nghiem Caltech

Woodward W. Fischer Caltech

Gen K. Li Caltech

Michael P. Lamb Caltech
eng
DOI: 10.22002/d1.8958
title: A simple force balance model of subduction initiation--Supplementary dataset

description: This is the supplementary dataset for paper "A simple force balance model of subduction initiation".
DOI: 10.5517/ccdc.csd.cc2bvsrr
title: CCDC 2170705: Experimental Crystal Structure Determination

description: Related Article: Xiao-Yan Zhang, Ka Lu, Bao-Kuan Guo, Ya-Ping Shao, Hong Wang, Fu-Min Zhang, Yong-Qiang Tu, Xiao-Ming Zhang|2022|J.Org.Chem.|87|15031|doi:10.1021/acs.joc.2c01421
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.22002/d1.866
title: Ubr1_2_Hot_Plate

description: Pain response of Ubr1_2 DKO mice using hot plate
DOI: 10.25810/k55w-7a04.55
title: World Radio Coverage of Climate Change or Global Warming, 2000-2022 - October 2022

description: The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.22002/d1.321
title: Code for Crystal Knob xenoliths project

description: Code repository for creating the analytical results of the Crystal Knob xenolith project.
DOI: 10.22002/d1.320
title: Database for Crystal Knob xenoliths project

description: PostgreSQL/PostGIS (10.0/2.4) database binary dump file containing analytical data and model results for Crystal Knob xenolith project. The database contains analytical microprobe and SIMS data, mapping data for tectonic reconstructions, and results of finite-element and modeling runs. The  data models and analysis code used to access this database is in an accompanying data record.
DOI: 10.22002/d1.305
title: Supplemental Data for manuscript titled 'Hard X-ray Bursts Observed in Association with Rayleigh-Taylor Instigated Current Disruption in a Solar-Relevant Lab Experiment'

description: X-ray, Magnetic, and Voltage/Current data for all shots used in analysis presented in the manuscript titled 'Hard X-ray Bursts Observed in Association with Rayleigh-Taylor Instigated Current Disruption in a Solar-Relevant Lab Experiment'. Headers included in each data set and ReadMe.pdf is included to ensure understanding.
description: Related Publication:
Hard X-ray Bursts Observed in Association with Rayleigh-Taylor Instigated Current Disruption in a Solar-Relevant Lab Experiment

Marshall, R.S. Applied Physics and Materials Science, California Institute of Technology

Bellan, P.M. Applied Physics and Materials Science, California Institute of Technology

JGR: Space Physics
eng
DOI: 10.22002/d1.298
title: Subduction Initiation Simulation Results

description: How subduction initiates with mechanically unfavorable lithospheric heterogeneities is important and rarely studied. We investigate this with a geodynamic model for the Puysegur Incipient Subduction Zone (PISZ) south of New Zealand. The model incorporates a true free surface, elasto-visco-plastic rheology and phase changes. Our predictions fit the morphology of the Puysegur Trench and Ridge and the deformation history on the overriding plate. We show how a new thrust fault forms and evolves into a smooth subduction interface, and how a preexisting weak zone can become a vertical fault inboard of the thrust fault during subduction initiation, consistent with two-fault system at PISZ. The model suggests that the PISZ may not yet be self-sustaining. We propose the Snares Zone (or Snares Trough) is caused by plate coupling differences between shallower and deeper parts, the tectonic sliver between two faults experiences strong rotation, and low density material accumulates beneath the Snares Zone.
DOI: 10.6084/m9.figshare.21585567
title: Round 1 - Primary school literature scores

description: This dataset contains literature scores of grade 2 primary school students in 2017.
DOI: 10.22002/d1.237
title: AAV-PHP.S transduction across multiple layers of the small intestine

description: A video demonstrating the transduction of AAV-PHP.S across multiple layers of the small intestine after optical clearing with refractive index matching solution (RIMS). Native GFP fluorescence (green) from ssAAV-PHP.S:CAG-NLS-GFP at 1 x 1012vg/mouse is shown. S100b staining (magenta) is shown for contrast.
DOI: 10.22002/d1.236
title: Visualizing endogenous fluorescence throughout a cleared mouse vertebral body.

description: The movie shows an L4 vertebra body of a mouse. The intervertebral disks labeled in red can be seen in the vertical edge of the image. Longitudinal sections (30 µm thick) of the vertebra body at different depths can also be seen where the red channel shows Sox9+ cells and the green channel shows tissue autofluorescence.
description: Related Publication:
Bone CLARITY: clearing, imaging, and computational analysis of osteoprogenitors within intact bone marrow 

Chan, Ken Caltech

Greenbaum, Alon Caltech

Gradinaru, Viviana Caltech

Science Translational Medicine 

2017-04-26

https://doi.org/10.1126/scitranslmed.aah6518
eng
DOI: 10.22002/d1.235
title: Visualizing endogenous fluorescence throughout a cleared mouse tibia

description: MIP image of an entire mouse tibia rotated in different angles. Zoomed in digital sections (30 µm thick) of the tuberosity and the diaphysis are shown. The Sox9+ cells are labeled with tdTomato and tissue autofluorescence in green for structural orientation. When the red channel is turned off (Z = 2016 µm) some cellular processes can be seen.
description: Related Publication:
Bone CLARITY: clearing, imaging, and computational analysis of osteoprogenitors within intact bone marrow 

Chan, Ken Caltech

Greenbaum, Alon Caltech

Gradinaru, Viviana Caltech

Science Translational Medicine 

2017-04-26

https://doi.org/10.1126/scitranslmed.aah6518
eng