cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12144378
title: Additional file 7 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 7: Supplementary Table 7. Pathway analysis of GTEx S-TissueXcan results.
DOI: 10.6084/m9.figshare.12144378.v1
title: Additional file 7 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 7: Supplementary Table 7. Pathway analysis of GTEx S-TissueXcan results.
DOI: 10.6084/m9.figshare.12144384.v1
title: Additional file 8 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 8: Supplementary Table 8. Pathway analysis of CMC S-PrediXcan results.
DOI: 10.6084/m9.figshare.12144366
title: Additional file 5 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 5: Supplementary Table 5. Single-tissue S-PrediXcan results from dorsolateral prefrontal cortex (CMC).
DOI: 10.6084/m9.figshare.12144372
title: Additional file 6 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 6: Supplementary Table 6. Fine-mapping of causal gene sets (FOCUS) of Alzheimer’s disease GWAS summary statistics.
DOI: 10.6084/m9.figshare.12144360
title: Additional file 4 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 4: Supplementary Table 4. Significant S-TissueXcan results.
DOI: 10.6084/m9.figshare.12144366.v1
title: Additional file 5 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 5: Supplementary Table 5. Single-tissue S-PrediXcan results from dorsolateral prefrontal cortex (CMC).
DOI: 10.6084/m9.figshare.12144372.v1
title: Additional file 6 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 6: Supplementary Table 6. Fine-mapping of causal gene sets (FOCUS) of Alzheimer’s disease GWAS summary statistics.
DOI: 10.6084/m9.figshare.12144360.v1
title: Additional file 4 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 4: Supplementary Table 4. Significant S-TissueXcan results.
DOI: 10.6084/m9.figshare.12144348
title: Additional file 2 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 2: Supplementary Table 2. Single-tissue S-PrediXcan results across 48 GTEx tissues.
DOI: 10.6084/m9.figshare.12144357
title: Additional file 3 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 3: Supplementary Table 3. Single-tissue S-PrediXcan results across 48 GTEx collapsed by gene.
DOI: 10.6084/m9.figshare.12144357.v1
title: Additional file 3 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 3: Supplementary Table 3. Single-tissue S-PrediXcan results across 48 GTEx collapsed by gene.
DOI: 10.6084/m9.figshare.12144348.v1
title: Additional file 2 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 2: Supplementary Table 2. Single-tissue S-PrediXcan results across 48 GTEx tissues.
DOI: 10.6084/m9.figshare.12144339
title: Additional file 1 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 1: Supplementary Table 1. Bonferroni corrected P value thresholds after adjusting for the number of genes expressed in a given tissue (i.e. 0.05/number of genes in tissue).
DOI: 10.6084/m9.figshare.12144339.v1
title: Additional file 1 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 1: Supplementary Table 1. Bonferroni corrected P value thresholds after adjusting for the number of genes expressed in a given tissue (i.e. 0.05/number of genes in tissue).
DOI: 10.6084/m9.figshare.12144318
title: Additional file 7 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 7. Supplementary Table S6
DOI: 10.6084/m9.figshare.12144321
title: Additional file 10 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 10: Supplementary Table 10. Pathway analysis of CMC S-PrediXcan results, no APOE region.
DOI: 10.6084/m9.figshare.12144309
title: Additional file 5 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 5. Supplementary Table S4
DOI: 10.6084/m9.figshare.12144318.v1
title: Additional file 7 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 7. Supplementary Table S6
DOI: 10.6084/m9.figshare.12144309.v1
title: Additional file 5 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 5. Supplementary Table S4
DOI: 10.6084/m9.figshare.12144315
title: Additional file 6 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 6. Supplementary Table S5
DOI: 10.6084/m9.figshare.12144321.v1
title: Additional file 10 of An analysis of genetically regulated gene expression across multiple tissues implicates novel gene candidates in Alzheimer’s disease

description: Additional file 10: Supplementary Table 10. Pathway analysis of CMC S-PrediXcan results, no APOE region.
DOI: 10.6084/m9.figshare.12144306
title: Additional file 4 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 4. Supplementary Table S3
DOI: 10.6084/m9.figshare.12144315.v1
title: Additional file 6 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 6. Supplementary Table S5
DOI: 10.6084/m9.figshare.12144300
title: Additional file 3 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 3. Supplementary Table S2
DOI: 10.6084/m9.figshare.12144306.v1
title: Additional file 4 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 4. Supplementary Table S3
DOI: 10.6084/m9.figshare.12144294
title: Additional file 2 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 2. Supplementary Table S1
DOI: 10.6084/m9.figshare.12144300.v1
title: Additional file 3 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 3. Supplementary Table S2
DOI: 10.6084/m9.figshare.12144294.v1
title: Additional file 2 of Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes

description: Additional file 2. Supplementary Table S1
DOI: 10.6084/m9.figshare.12144237
title: Additional file 1 of Data sources and methods used to determine pretest probabilities in a cohort of Cochrane diagnostic test accuracy reviews

description: Additional file1. Included and excluded reviews. An Excel table showing the included and excluded Cochrane DTA reviews with exclusion reasons and URLs linking to the reviews in the Cochrane Database of Systematic Reviews.
DOI: 10.6084/m9.figshare.12144237.v1
title: Additional file 1 of Data sources and methods used to determine pretest probabilities in a cohort of Cochrane diagnostic test accuracy reviews

description: Additional file1. Included and excluded reviews. An Excel table showing the included and excluded Cochrane DTA reviews with exclusion reasons and URLs linking to the reviews in the Cochrane Database of Systematic Reviews.
DOI: 10.6084/m9.figshare.12144180
title: Additional file 2 of Effects of industrial effluents on the quality of water in Namanve stream, Kampala Industrial and Business Park, Uganda

description: Additional file 2: Table S2. Raw data for investigated quality parameters of water from Namanve stream, Kampala Industrial and Business Park, Uganda.
DOI: 10.6084/m9.figshare.12144180.v1
title: Additional file 2 of Effects of industrial effluents on the quality of water in Namanve stream, Kampala Industrial and Business Park, Uganda

description: Additional file 2: Table S2. Raw data for investigated quality parameters of water from Namanve stream, Kampala Industrial and Business Park, Uganda.
DOI: 10.6084/m9.figshare.12144165
title: Additional file 5 of Supply ranges of stone blocks used in masonry bridges and their construction period along the East Royal Road in the Khmer Empire, Cambodia

description: Additional file 5: Raw data of thickness of laterite blocks used for the bridge construction along the East Royal Road.
DOI: 10.6084/m9.figshare.12144156
title: Additional file 4 of Supply ranges of stone blocks used in masonry bridges and their construction period along the East Royal Road in the Khmer Empire, Cambodia

description: Additional file 4: Raw data of magnetic susceptibilities of sandstone blocks used for the bridge construction along the East Royal Road.
DOI: 10.6084/m9.figshare.12144144
title: Additional file 1 of Supply ranges of stone blocks used in masonry bridges and their construction period along the East Royal Road in the Khmer Empire, Cambodia

description: Additional file 1: Data used for the cluster and principal component analyses. The median concentrations of each element and magnetic susceptibility data listed in Table 1 were standardised to a constant total.
DOI: 10.6084/m9.figshare.12144147
title: Additional file 2 of Supply ranges of stone blocks used in masonry bridges and their construction period along the East Royal Road in the Khmer Empire, Cambodia

description: Additional file 2: Raw data of chemical composition analysis of laterite blocks used for the bridge construction along the East Royal Road by a portable XRF.
DOI: 10.6084/m9.figshare.12144153
title: Additional file 3 of Supply ranges of stone blocks used in masonry bridges and their construction period along the East Royal Road in the Khmer Empire, Cambodia

description: Additional file 3: Raw data of magnetic susceptibilities of laterite blocks used for the bridge construction along the East Royal Road.
DOI: 10.6084/m9.figshare.12144147.v1
title: Additional file 2 of Supply ranges of stone blocks used in masonry bridges and their construction period along the East Royal Road in the Khmer Empire, Cambodia

description: Additional file 2: Raw data of chemical composition analysis of laterite blocks used for the bridge construction along the East Royal Road by a portable XRF.
DOI: 10.6084/m9.figshare.12144123
title: Additional file 1 of Optimization of PET protocol and interrater reliability of 18F-PSMA-11 imaging of prostate cancer

description: Additional file 1. Dataset representing detailed results of the Phase 2 clinical trial study on 18F-PSMA-11.
DOI: 10.6084/m9.figshare.12144123.v1
title: Additional file 1 of Optimization of PET protocol and interrater reliability of 18F-PSMA-11 imaging of prostate cancer

description: Additional file 1. Dataset representing detailed results of the Phase 2 clinical trial study on 18F-PSMA-11.
DOI: 10.6084/m9.figshare.12144114
title: Additional file 3 of Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina

description: Additional file 3: Proteomic analysis data. Raw and processed proteomic analysis data of secreted proteins during growth of P. anserina on glucuronoarabinoxylan (GAX) and GAX + Lignin. Table S3. Unique/induced proteins other than plant cell wall active CAZymes during growth of P. anserina on GAX or GAX + Lignin. Minimal relative abundance 0.2% of total protein and &gt; twofold increase in absence/presence lignin.
DOI: 10.6084/m9.figshare.12144114.v1
title: Additional file 3 of Evidence for ligninolytic activity of the ascomycete fungus Podospora anserina

description: Additional file 3: Proteomic analysis data. Raw and processed proteomic analysis data of secreted proteins during growth of P. anserina on glucuronoarabinoxylan (GAX) and GAX + Lignin. Table S3. Unique/induced proteins other than plant cell wall active CAZymes during growth of P. anserina on GAX or GAX + Lignin. Minimal relative abundance 0.2% of total protein and &gt; twofold increase in absence/presence lignin.
DOI: 10.6084/m9.figshare.12144084
title: Additional file 1 of Modern human changes in regulatory regions implicated in cortical development

description: Additional file 1. Supplementary Material.
DOI: 10.6084/m9.figshare.12144084.v1
title: Additional file 1 of Modern human changes in regulatory regions implicated in cortical development

description: Additional file 1. Supplementary Material.
DOI: 10.6084/m9.figshare.12144048
title: Additional file 9 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 9 Table S3. Table showing all CNVs detected in the fine-mapped region of association by CNVnator. For every CNV the following information is displayed: sample showing the CNV (Sample); type of CNV (Event); genomic coordinates (Chr:start-stop); length of the CNV (Event Length); CNV normalized read depth (Normalized RD); p-value of the mean normalized read depth value difference from genomic average (p-val1); p-value from probability of read depth values within the region to be in the tails of Gaussian distribution describing frequencies of read depth values in bins (p-val2); same as p-val1, but for the middle of the CNV (p-val3); same as p-val2, but for the middle of the CNV (p-val4); fraction of reads mapped with mapping quality equal to zero (q0).
DOI: 10.6084/m9.figshare.12144048.v1
title: Additional file 9 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 9 Table S3. Table showing all CNVs detected in the fine-mapped region of association by CNVnator. For every CNV the following information is displayed: sample showing the CNV (Sample); type of CNV (Event); genomic coordinates (Chr:start-stop); length of the CNV (Event Length); CNV normalized read depth (Normalized RD); p-value of the mean normalized read depth value difference from genomic average (p-val1); p-value from probability of read depth values within the region to be in the tails of Gaussian distribution describing frequencies of read depth values in bins (p-val2); same as p-val1, but for the middle of the CNV (p-val3); same as p-val2, but for the middle of the CNV (p-val4); fraction of reads mapped with mapping quality equal to zero (q0).
DOI: 10.6084/m9.figshare.12144033
title: Additional file 7 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 7: Table S1. Table showing the genotypes of the GWA analysis top SNP (CFA11: 40,777,312), average coverage and proportions of reads mapping to Canfam3.1 for the sequenced HC and LC case (highlighted in dark and light red) and HC and LC control (highlighted in dark and light blue) samples. HC: high coverage; LC: low coverage.
DOI: 10.6084/m9.figshare.12144033.v1
title: Additional file 7 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 7: Table S1. Table showing the genotypes of the GWA analysis top SNP (CFA11: 40,777,312), average coverage and proportions of reads mapping to Canfam3.1 for the sequenced HC and LC case (highlighted in dark and light red) and HC and LC control (highlighted in dark and light blue) samples. HC: high coverage; LC: low coverage.
DOI: 10.6084/m9.figshare.12144006
title: Additional file 4 of High post-anthesis temperature effects on bread wheat (Triticum aestivum L.) grain transcriptome during early grain-filling

description: Additional File 4. Table showing endosperm predominantly expressed genes arranged in clusters.
DOI: 10.6084/m9.figshare.12143997
title: Additional file 3 of High post-anthesis temperature effects on bread wheat (Triticum aestivum L.) grain transcriptome during early grain-filling

description: Additional File 3. Table showing pericarp predominantly expressed genes arranged in clusters.
DOI: 10.6084/m9.figshare.12144006.v1
title: Additional file 4 of High post-anthesis temperature effects on bread wheat (Triticum aestivum L.) grain transcriptome during early grain-filling

description: Additional File 4. Table showing endosperm predominantly expressed genes arranged in clusters.
DOI: 10.6084/m9.figshare.12143997.v1
title: Additional file 3 of High post-anthesis temperature effects on bread wheat (Triticum aestivum L.) grain transcriptome during early grain-filling

description: Additional File 3. Table showing pericarp predominantly expressed genes arranged in clusters.
DOI: 10.6084/m9.figshare.12143991
title: Additional file 2 of High post-anthesis temperature effects on bread wheat (Triticum aestivum L.) grain transcriptome during early grain-filling

description: Additional File 2. RNA alignment rate.
DOI: 10.6084/m9.figshare.12143985
title: Additional file 1 of High post-anthesis temperature effects on bread wheat (Triticum aestivum L.) grain transcriptome during early grain-filling

description: Additional File 1. Table 1S Grain yield data.
DOI: 10.6084/m9.figshare.12143982
title: Additional file 13 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 13: Table S7. Primer sequences, used annealing temperatures and times and predicted PCR product lengths used in the study.
DOI: 10.6084/m9.figshare.12143991.v1
title: Additional file 2 of High post-anthesis temperature effects on bread wheat (Triticum aestivum L.) grain transcriptome during early grain-filling

description: Additional File 2. RNA alignment rate.
DOI: 10.6084/m9.figshare.12143979
title: Additional file 12 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 12: Table S6. Overview of all individuals genotyped for the deletion.
DOI: 10.6084/m9.figshare.12143982.v1
title: Additional file 13 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 13: Table S7. Primer sequences, used annealing temperatures and times and predicted PCR product lengths used in the study.
DOI: 10.6084/m9.figshare.12143985.v1
title: Additional file 1 of High post-anthesis temperature effects on bread wheat (Triticum aestivum L.) grain transcriptome during early grain-filling

description: Additional File 1. Table 1S Grain yield data.
DOI: 10.6084/m9.figshare.12143979.v1
title: Additional file 12 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 12: Table S6. Overview of all individuals genotyped for the deletion.
DOI: 10.6084/m9.figshare.12143964
title: Additional file 10 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 10: Table S4. Table showing the genotypes of the GWA study top SNP (CFA11: 40,777,312), the predicted CNV (Del3) inferred genotypes (CFA11: 40,858,901 - 40,862,600) and genotypes of the fine-mapping top SNP (CFA11: 42,382,440) of the sequenced HC and LC case (highlighted in dark and light red) and HC and LC control (highlighted in dark and light blue) samples. HC: high coverage; LC: low coverage.
DOI: 10.6084/m9.figshare.12143967
title: Additional file 1 of Assessing two methods for estimating excess mortality of chronic diseases from aggregated data

description: Additional file 1. Script (plain text file, accessible via any text editor, e.g., Notepad, GNU Emacs etc.) for the example about type 2 diabetes, intended to use with the statistical software R (The R Foundation of Statistical Software).
DOI: 10.6084/m9.figshare.12143964.v1
title: Additional file 10 of Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

description: Additional file 10: Table S4. Table showing the genotypes of the GWA study top SNP (CFA11: 40,777,312), the predicted CNV (Del3) inferred genotypes (CFA11: 40,858,901 - 40,862,600) and genotypes of the fine-mapping top SNP (CFA11: 42,382,440) of the sequenced HC and LC case (highlighted in dark and light red) and HC and LC control (highlighted in dark and light blue) samples. HC: high coverage; LC: low coverage.
DOI: 10.6084/m9.figshare.12143967.v1
title: Additional file 1 of Assessing two methods for estimating excess mortality of chronic diseases from aggregated data

description: Additional file 1. Script (plain text file, accessible via any text editor, e.g., Notepad, GNU Emacs etc.) for the example about type 2 diabetes, intended to use with the statistical software R (The R Foundation of Statistical Software).
DOI: 10.6084/m9.figshare.12143931
title: Additional file 7 of Simultaneous quantification of natural and inducible regulatory T-cell subsets during interferon-β therapy of multiple sclerosis patients

description: Additional file 7: Table S3. Association with disease activity. Patients were divided in two groups depending on whether they manifested or not new lesions in T2 or new enhancing lesions.
DOI: 10.6084/m9.figshare.12143931.v1
title: Additional file 7 of Simultaneous quantification of natural and inducible regulatory T-cell subsets during interferon-β therapy of multiple sclerosis patients

description: Additional file 7: Table S3. Association with disease activity. Patients were divided in two groups depending on whether they manifested or not new lesions in T2 or new enhancing lesions.
DOI: 10.6084/m9.figshare.12143901
title: Additional file 2 of Simultaneous quantification of natural and inducible regulatory T-cell subsets during interferon-β therapy of multiple sclerosis patients

description: Additional file 2: Table S2. Number of samples received at T12 and T24 for MxA quantification and patient subdivision according to MxA induction. The MxA quantification was performed before IFN-β therapy initiation (T0) and then after 12 (T12) and 24 (T24) months of therapy.