cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7vyfhx
title: Occurrence Download

description: A dataset containing 1452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Colobanthus quitensis (Kunth) Bartl., Colobanthus subulatus (d'Urv.) Hook.fil., Colobanthus curtisiae J.G.West, Colobanthus apetalus (Labill.) Druce)",
 "OccurrenceStatus is one of (Present)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "Year is greater than or equal to 1970"
 ]
}

 The dataset includes 1452 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004161-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5773697
title: Microbial narrow-escape is facilitated by wall interactions: Simulation Supplementary material

description: Simulation codes and simulation results for the paper "Microbial narrow-escape is facilitated by wall interactions".
description: We acknowledge financial support from grants CTM2017-83774-P and IED2019-000958-I (IT), PID2019-104232GB-I00 (IT and MP) from the Spanish Ministerio de Ciencia e Innovaci ́on (MICINN), the Ram ́on y Ca jal Program (RYC-2018-02534; MP), ECOST-STSM-Request-CA17120-47203 for the COST Action (European Cooperation in Science and Technol- ogy); RPG-2018-345 (AA and MP) from The Leverhulme Trust; H2020 MSCA ITN PHYMOT (Grant agreement No 955910; IT and MP). MS also acknowledges A. Marin for his support.
DOI: 10.5281/zenodo.5773698
title: Microbial narrow-escape is facilitated by wall interactions: Simulation Supplementary material

description: Simulation codes and simulation results for the paper "Microbial narrow-escape is facilitated by wall interactions".
description: We acknowledge financial support from grants CTM2017-83774-P and IED2019-000958-I (IT), PID2019-104232GB-I00 (IT and MP) from the Spanish Ministerio de Ciencia e Innovaci ́on (MICINN), the Ram ́on y Ca jal Program (RYC-2018-02534; MP), ECOST-STSM-Request-CA17120-47203 for the COST Action (European Cooperation in Science and Technol- ogy); RPG-2018-345 (AA and MP) from The Leverhulme Trust; H2020 MSCA ITN PHYMOT (Grant agreement No 955910; IT and MP). MS also acknowledges A. Marin for his support.
DOI: 10.5281/zenodo.14764534
title: AIVA – AI Visual Vital Signs Assessment

description: This dataset is part of the **AIVA Project** (file number **2021/C005/00145071**), funded by **Red.es** through the 2021 call for grants aimed at research and development projects in artificial intelligence and other digital technologies.

The objective of the **AIVA Project** is to explore the use of **remote photoplethysmography (rPPG)** for non-invasive estimation of **heart rate and blood pressure**.
DOI: 10.5281/zenodo.14764535
title: AIVA – AI Visual Vital Signs Assessment

description: This dataset is part of the **AIVA Project** (file number **2021/C005/00145071**), funded by **Red.es** through the 2021 call for grants aimed at research and development projects in artificial intelligence and other digital technologies.

The objective of the **AIVA Project** is to explore the use of **remote photoplethysmography (rPPG)** for non-invasive estimation of **heart rate and blood pressure**.
DOI: 10.5281/zenodo.13892007
title: Integrated Datasets for analyses on potentially hazardous locations for women in Valencia, Dublin, San Francisco, and Toluca

description: This dataset provides a compilation of the data used to analyze and identify potentially dangerousplaces for women. Multiple data collection techniques, including official data downloads, webscraping, and participatory mapping, were combined for integration, applying specific processing.The datasets refer to four cities: Valencia (Spain), Dublin (Ireland), San Francisco (United States),and Toluca (Mexico).Depending on the availability and context of each city, the datasets are classified into threecategories: DATA, TWT, and MAP. The DATA prefix refers to files containing the results of theanalysis of socioeconomic variables downloaded from official sources; for the mapping, thestandard territorial unit was a 25x25 m grid for Valencia and 50x50 m for Dublin and San Francisco.The files with the prefix TWT are composed of datasets containing tweets collected through webscraping and analyzed using natural language processing (NLP) algorithms and neural networks;the purpose is to identify and classify tweets related to gender violence, feelings of fear, orperceptions of insecurity. For MAP files, participants gathered them through participatorymapping processes, using specific calls to public space users and a supporting web applicationdesigned for this purpose.
DOI: 10.5281/zenodo.14726381
title: Integrated Datasets for analyses on potentially hazardous locations for women in Valencia, Dublin, San Francisco, and Toluca

description: This dataset provides a compilation of the data used to analyze and identify potentially dangerousplaces for women. Multiple data collection techniques, including official data downloads, webscraping, and participatory mapping, were combined for integration, applying specific processing.The datasets refer to four cities: Valencia (Spain), Dublin (Ireland), San Francisco (United States),and Toluca (Mexico).Depending on the availability and context of each city, the datasets are classified into threecategories: DATA, TWT, and MAP. The DATA prefix refers to files containing the results of theanalysis of socioeconomic variables downloaded from official sources; for the mapping, thestandard territorial unit was a 25x25 m grid for Valencia and 50x50 m for Dublin and San Francisco.The files with the prefix TWT are composed of datasets containing tweets collected through webscraping and analyzed using natural language processing (NLP) algorithms and neural networks;the purpose is to identify and classify tweets related to gender violence, feelings of fear, orperceptions of insecurity. For MAP files, participants gathered them through participatorymapping processes, using specific calls to public space users and a supporting web applicationdesigned for this purpose. The files with the prefix POL contain datasets used for crime prediction based on crime density for the city of Valencia.
DOI: 10.15468/dl.wr8ru6
title: Occurrence Download

description: A dataset containing 1709 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Puma concolor (Linnaeus, 1771)"
 ]
}

 The dataset includes 1709 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004163-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10275419
title: Supplementary material for Gender & Personality & Tears manuscript (Gadea et al. 2023)

description: Supplementary material for the manuscript "The impact of gender stereotypes and observer personality on the perceived authenticity of tears". Consists of: 
- The anonymized databases (options A & B): only the age & gender of the participants are shown as demographic data, together with the results of the Salamanca questionnaire and the answers to the questions regarding perceptions about type of emotion, sincerity, and intensity for each photograph presented.  
- The 10 photographs that were used in the study (men and women), both the originals and the ones that were edited with the tear digitally erased.
DOI: 10.5281/zenodo.10275418
title: Supplementary material for Gender & Personality & Tears manuscript (Gadea et al. 2025)

description: Supplementary material for the manuscript "The impact of gender stereotypes and observer personality on the perceived authenticity of tears". Consists of: 
- The anonymized databases (options A & B): only the age & gender of the participants are shown as demographic data, together with the results of the Salamanca questionnaire and the answers to the questions regarding perceptions about type of emotion, sincerity, and intensity for each photograph presented.  
- The 10 photographs that were used in the study (men and women), both the originals and the ones that were edited with the tear digitally erased.
DOI: 10.5281/zenodo.14765684
title: Supplementary material for Gender & Personality & Tears manuscript (Gadea et al. 2025)

description: Supplementary material for the manuscript "The impact of gender stereotypes and observer personality on the perceived authenticity of tears". Consists of: 
- The anonymized databases (options A & B): only the age & gender of the participants are shown as demographic data, together with the results of the Salamanca questionnaire and the answers to the questions regarding perceptions about type of emotion, sincerity, and intensity for each photograph presented.  
- The 10 photographs that were used in the study (men and women), both the originals and the ones that were edited with the tear digitally erased.
DOI: 10.15468/dl.22m8tk
title: Occurrence Download

description: A dataset containing 2961 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mansonia altissima A.Chev."
 ]
}

 The dataset includes 2961 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004166-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/10610760
title: Mahanagar Yatayat Transport Dataset
DOI: 10.15468/dl.4shbjn
title: Occurrence Download

description: A dataset containing 1349 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melaleuca argentea W.Fitzg."
 ]
}

 The dataset includes 1349 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004168-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pjsqcc
title: Occurrence Download

description: A dataset containing 2875 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Maranthes corymbosa Blume"
 ]
}

 The dataset includes 2875 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004167-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5284/1126012
title: 'Rewilding' later prehistory: Bronze and Iron Age ecologies from the perspective of the wild

description: This collection brings together plant macrofossil and vertebrate animal remains data for the Bronze and Iron Ages (2500 BCE - 43 CE) from five widely-spaced case study areas, with the aim of informing a novel analysis of wildlife in prehistoric Britain. While the main analytical focus was on wild plants and animals, the collection comprises data for all plant macrofossil and vertebrate animal remains within the study period and areas, in recognition of the reality that 'wild' and 'domesticated' are neither fixed nor neatly defined categories. Summary information is also provided for pollen, insect and molluscan evidence and for objects made of materials derived from plants or animals. The data were gathered by Anwen Cooper (PI) and Tina Roushannafas (project researcher) between September 2022 and December 2024 in collaboration with 71 palaeoenvironmental specialists from across British Archaeology and with digital experts at the Archaeology Data Service. This work was undertaken as part of the UKRI-funded 'Rewilding' later prehistory project (Grant ref. MR/W00755X/1).
DOI: 10.17632/tzjjzxxtwy.1
title: LINF_040012500

description: WASH1-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.5mbg84
title: Occurrence Download

description: A dataset containing 4727 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melaleuca armillaris (Gaertn.) Sm."
 ]
}

 The dataset includes 4727 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004169-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzpbem
title: Occurrence Download

description: A dataset containing 2587 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melaleuca bracteata F.Muell."
 ]
}

 The dataset includes 2587 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004171-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uqabzt
title: Occurrence Download

description: A dataset containing 2411 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Inocybe assimilata Britzelm."
 ]
}

 The dataset includes 2411 records from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004170-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9uhf6v
title: Occurrence Download

description: A dataset containing 4882 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melaleuca cajuputi Powell"
 ]
}

 The dataset includes 4882 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004172-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14765677
title: Seasonal, daily and hourly flight schedule deviations - 4 European airports (01.12.2023-30.11.2024)
DOI: 10.5281/zenodo.14765678
title: Seasonal, daily and hourly flight schedule deviations - 4 European airports (01.12.2023-30.11.2024)
DOI: 10.15468/dl.cycje3
title: Occurrence Download

description: A dataset containing 260 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-31.03950 32.38533,23.55758 32.38533,23.55758 54.21457,-31.03950 54.21457,-31.03950 32.38533))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salix ceretana (P.Monts.) Chmelar"
 ]
}

 The dataset includes 260 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004174-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14655729
title: Dataset for manuscript titled: Female mice exhibit resistance to disease progression despite early pathology in a transgenic mouse model inoculated with alpha-synuclein fibrils

description: This repository contains the source data and code for the analyses in the manuscript titled "Female mice exhibit resistance to disease progression despite early pathology in a transgenic mouse model inoculated with alpha-synuclein fibrils", accepted for publication at Communications Biology.



Main subject file csv: masterfile-all-timepoint-data.csv

however additional csv files used for analysis are as following:



PT-WH-behavioural-data-bytrial-for-coxanalysis.csv -- data structured by trial to enable cox analysis



symptom-and-survival-tracking-data.csv -- symptom tracking and survival information provided separately


sex-difference-western-blot-data.xlsx -- western blot data collected and analyzed by Vladislav Novikov and Rodrigo Sandoval Contreras



All *.R files are R code scripts and named according to the analysis performed



Behavioural analyses



survival-plot.R           

symptom_profile.R

weight-rotarod-plots.R

PT-cox-analysis.R

PT-cox-analysis-sex-specific.R

WH-cox-analysis.R

WH-cox-analysis-sex-specific.R



Deformation-based analysis: voxel-wise volume trajectories



dbm-template.mnc



dbm-template-mask.mnc


DBM-models-and-peak-voxel-plots.R 

linear models:



M83-HuvsPBS-model.rds 

M83-HuvsPBS-model-females-only.rds  

M83-HuvsPBS-model-males-only.rds 

M83HuPFF-MvsF-model-male-effect-female-reference.rds



statistical maps for the 4 linear models:



DBM-statsmap-M83-HuvsPBS.mnc  

DBM-statsmap-M83HuvsPBS-withsex.mnc

DBM-statsmap-M83-HuvsPBS-females-only.mnc  

DBM-statsmap-M83-HuvsPBS-males-only.mnc

DBM-statsmap-M83HuPFF-MvsF-male-effect-female-reference.mnc   





Orthogonal projective non-negative martix factorization analysis  



4 OPNMF runs were performed: 1) 90 dpi all subjects; 2) 90 dpi female only; 3) 90 dpi male only; 4) 120 dpi all subjects



each run has an .R script, 6 minc files containing the spatial pattens for each of the 6 output components, and a csv file containing the subject weights
DOI: 10.5281/zenodo.14655730
title: Dataset for manuscript titled: Female mice exhibit resistance to disease progression despite early pathology in a transgenic mouse model inoculated with alpha-synuclein fibrils

description: This repository contains the source data and code for the analyses in the manuscript titled "Female mice exhibit resistance to disease progression despite early pathology in a transgenic mouse model inoculated with alpha-synuclein fibrils", accepted for publication at Communications Biology.



Main subject file csv: masterfile-all-timepoint-data.csv

however additional csv files used for analysis are as following:



PT-WH-behavioural-data-bytrial-for-coxanalysis.csv -- data structured by trial to enable cox analysis



symptom-and-survival-tracking-data.csv -- symptom tracking and survival information provided separately


sex-difference-western-blot-data.xlsx -- western blot data collected and analyzed by Vladislav Novikov and Rodrigo Sandoval Contreras



All *.R files are R code scripts and named according to the analysis performed



Behavioural analyses



survival-plot.R           

symptom_profile.R

weight-rotarod-plots.R

PT-cox-analysis.R

PT-cox-analysis-sex-specific.R

WH-cox-analysis.R

WH-cox-analysis-sex-specific.R



Deformation-based analysis: voxel-wise volume trajectories



dbm-template.mnc



dbm-template-mask.mnc


DBM-models-and-peak-voxel-plots.R 

linear models:



M83-HuvsPBS-model.rds 

M83-HuvsPBS-model-females-only.rds  

M83-HuvsPBS-model-males-only.rds 

M83HuPFF-MvsF-model-male-effect-female-reference.rds



statistical maps for the 4 linear models:



DBM-statsmap-M83-HuvsPBS.mnc  

DBM-statsmap-M83HuvsPBS-withsex.mnc

DBM-statsmap-M83-HuvsPBS-females-only.mnc  

DBM-statsmap-M83-HuvsPBS-males-only.mnc

DBM-statsmap-M83HuPFF-MvsF-male-effect-female-reference.mnc   





Orthogonal projective non-negative martix factorization analysis  



4 OPNMF runs were performed: 1) 90 dpi all subjects; 2) 90 dpi female only; 3) 90 dpi male only; 4) 120 dpi all subjects



each run has an .R script, 6 minc files containing the spatial pattens for each of the 6 output components, and a csv file containing the subject weights
DOI: 10.15468/dl.enxhze
title: Occurrence Download

description: A dataset listing the 6 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-12.71662 36.87569,4.63253 36.87569,4.63253 43.81230,-12.71662 43.81230,-12.71662 36.87569))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cervus elaphus Linnaeus, 1758"
 ]
}

 The dataset's 6 records were derived from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004151-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18033363
title: Synthetic datasets for Make - Generalized Assignment with Polyvalence and Difficulty Problem / Mathematical Programming / Base Model
DOI: 10.5281/zenodo.18033364
title: Synthetic datasets for Make - Generalized Assignment with Polyvalence and Difficulty Problem / Mathematical Programming / Base Model
DOI: 10.15468/dl.kphshg
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Armenia, Angola, Argentina)",
 "TaxonKey is one of (, Elasmobranchii, Holocephali, Myxini)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Specimen, Material sample, Living Specimen)",
 "Year is 2022"
 ]
}

 The dataset includes 44 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063922-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a2r27s
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ardisia artemata B.C.Stone"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015970-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ssdvm6
title: Occurrence Download

description: A dataset containing 1763 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Luciobarbus bocagei (Steindachner, 1864)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1763 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0221193-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aygpsf
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eubalaena japonica (Lacépède, 1818)"
 ]
}

 The dataset includes 53 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017929-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cuw8f5
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "Country is South Africa",
 "TaxonKey is Trachurus capensis Castelnau, 1861",
 "Year 1980-2021"
 ]
}

 The dataset includes 191 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033379-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.