cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p98zso0x
title: Stable isotope analysis of San Francisco Bay-Delta primary producers (1990-2000)

description: This dataset is a compilation of multiple studies over different periods and in many environments as described below. These data were collected to measure temporal fluctuations in plant isotopic composition associated with seasonal cycles of growth and environmental variability. In 1990, 1992, and 1998-2000, a total of 868 samples were collected and analyzed to determine carbon and nitrogen mass and 13C:12C and 15N:14N ratios by mass spectrometry. Intensive sampling was done in 1999 when species of vascular plants common to wetlands of northern California were sampled biweekly to monthly for one year along a gradient of habitats (salt-marsh creek, freshwater brackish marsh, seasonal wetland) within the San Francisco Bay National Wildlife Refuge. Additional spatial variability was measured from seasonal sampling in the freshwater-brackish marshes, river channels, tidal lakes, and riparian corridors of the Sacramento-San Joaquin River Delta and from salt marshes and mudflats of the other marine embayments of San Francisco Bay (see attached map for sample locations). Target plant communities included terrestrial woody perennials of riparian habitat, emergent vascular plants of freshwater and brackish marshes, floating and submerged vascular plants, multicellular freshwater algae, benthic diatoms from intertidal mudflats, and C3 and C4 salt-marsh plants. Seston samples were collected in 1990, 1992 and 1999-2000 during algal blooms in river/lake habitats and San Francisco Bay to provide surrogate measures of the isotopic signatures of freshwater and estuarine-marine phytoplankton. The taxonomic identifications are based on 1994 naming conventions. Cloern, J. E., Canuel, E. A., & Harris, D. (2002). Stable carbon and nitrogen isotope composition of aquatic and terrestrial plants of the San Francisco Bay estuarine system. Limnology and oceanography, 47(3), 713-729.
DOI: 10.7910/dvn/f5ez7b/cjzaee
title: 12. 2019_WA_SEN_KAF_CSA Monitoring Results.xls

description: :unav
DOI: 10.7910/dvn/f5ez7b/nr0jla
title: M4.tab

description: :unav
DOI: 10.7910/dvn/f5ez7b/nzzeiy
title: M3.tab

description: :unav
DOI: 10.7910/dvn/f5ez7b/r6syk8
title: M2.tab

description: :unav
DOI: 10.18434/m32225
title: Calculated values of the second dielectric and refractivity virial coefficients of helium, neon, and argon.

description: Values of second dielectric and refractivity virial coefficients computed, with rigorous accounting for quantum effects, from state-of-the-art pair potentials and interaction polarizabilities. Values given at 1 K intervals (finer intervals below 10 K) for helium (both mass 3 and 4 isotopes), neon (both mass 20 and 22 isotopes), and argon (mass 40 isotope). Upper temperature limit is 2000 K in all cases. Lower temperature limit is 0.5 K for helium, 4 K for neon, 50 K for argon.These files are Supplemental information to: G. Garberoglio and A.H. Harvey, "Path-integral Calculation of the Second Dielectric and Refractivity Virial Coefficients of Helium, Neon, and Argon," submitted to J. Res. NIST (2020), which describes how the values were calculated.
DOI: 10.7910/dvn/f5ez7b/6lbf23
title: 5. 2019_WA_SEN_KAF_Comments_Data_Cleaning.tab

description: :unav
DOI: 10.7910/dvn/f5ez7b/jfbbk9
title: 9. 2019_WA_SEN_KAF_Enumerators_Recording_anonimized.pdf

description: :unav
DOI: 10.7910/dvn/f5ez7b/qxcuqk
title: Peanut_crop_calculator.xls

description: :unav
DOI: 10.7910/dvn/f5ez7b/znkukg
title: Cattle_calculator.xls

description: :unav
DOI: 10.5281/zenodo.3818038
title: Data accompanying the GitHub repository bartonlab/paper-MPL-inference

description: This dataset contains data from simulations and analysis of within-host HIV-1 evolution that accompany the GitHub repository bartonlab/paper-MPL-inference. The GitHub repository contains code and data for reproducing results described in the manuscript "Resolving genetic linkage reveals patterns of selection in HIV-1 evolution." See the GitHub repository for details on the interpretation and analysis of this data.
DOI: 10.6084/m9.figshare.3761562.v1479
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.7910/dvn/dopmqy/gsuign
title: M3.tab

description: :unav
DOI: 10.7910/dvn/dopmqy/pouf0a
title: M4.tab

description: :unav
DOI: 10.7910/dvn/dopmqy/wjxqsq
title: M1D.tab

description: :unav
DOI: 10.7910/dvn/f5ez7b/1jelfl
title: Goats_calculator.xls

description: :unav
DOI: 10.7910/dvn/f5ez7b/aya56m
title: Millet_crop_calculator.xls

description: :unav
DOI: 10.7910/dvn/f5ez7b/fqi25x
title: Poultry_calculator.xls

description: :unav
DOI: 10.7910/dvn/f5ez7b/oelv0f
title: Maize_crop_calculator.xls

description: :unav
DOI: 10.7910/dvn/f5ez7b/qqs5vv
title: Farm calculator.xls

description: :unav
DOI: 10.7910/dvn/f5ez7b/tlst5j
title: Sheep_calculator.xls

description: :unav
DOI: 10.15468/evssr3
title: Deep-sea Echinoderidae (Kinorhyncha: Cyclorhagida) from the Northwest Pacific

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sørensen, Martin V., Rohal, Melissa, Thistle, David (2018): Deep-sea Echinoderidae (Kinorhyncha: Cyclorhagida) from the Northwest Pacific. European Journal of Taxonomy 456: 1-75, DOI: https://doi.org/10.5852/ejt.2018.456
DOI: 10.5281/zenodo.3817821
title: Data from: International authorship and collaboration in bioRxiv preprints

description: Data and supplementary tables for "International authorship and collaboration in bioRxiv preprints," a preprint first posted to bioRxiv on April 25, 2020. <strong>"reproduce.md"</strong> includes all R code used to generate figures and perform analyses described in the paper. <strong>"biorxiv_countries.postgres.backup"</strong> is a database snapshot that can be loaded into a PostgreSQL database to access all data collected and used in the study. <strong>"schema.pdf"</strong> describes each field in each table of the database. <strong>"manual_edits.sql"</strong> describes all corrections made to the automated inference of the country-level affiliations inferred for all authors. <strong>"affiliation_corrections.csv"</strong> lists every unique affiliation string that was re-categorized after institutional corrections. The consequences of the corrections described in "manual_edits.sql." <strong>"institution_corrections_summary.csv"</strong> summarizes "affiliation_corrections.csv" by listing each "before" and "after" correction one time. It is important to note that each before/after pair does not necessarily indicate that <em>every</em> affiliation string from the "before" institution was reassigned to the "after" institution, just that at least one affiliation string was switched from one to the other. <strong>Version history:</strong> <strong>0.2.1:</strong> Added "schema.pdf" file, previously only in the manuscript. <strong>0.2.0:</strong> Added new files "affiliation_corrections.csv" and "institution_corrections_summary.csv" <strong>0.1.1: </strong>Database snapshot added. <strong>0.1.0: </strong>First version with supplementary tables added.
DOI: 10.5281/zenodo.3818043
title: Recurrent inversion toggling and great ape genome evolution

description: This repository contains raw Strand-seq data aligned to GRCh38 that have been used to detect inversions in the study "Recurrent inversion toggling and great ape genome evolution". See Methods section of the above mentioned paper for more details.
DOI: 10.7910/dvn/dopmqy/mjvjwc
title: M5.tab

description: :unav
DOI: 10.7910/dvn/dopmqy/n1zamn
title: M1B.tab

description: :unav
DOI: 10.7910/dvn/dopmqy/rlrbnp
title: 12. 2019_EA_ETH_DOG_CSA Monitoring Results.xls

description: :unav
DOI: 10.7910/dvn/dopmqy/uafnwh
title: 5. 2019_EA_ETH_DOG_Comments_Data_Cleaning.tab

description: :unav
DOI: 10.7910/dvn/dopmqy/yta1hm
title: M1A.tab

description: :unav
DOI: 10.7910/dvn/dopmqy/ywlayr
title: M2.tab

description: :unav
DOI: 10.7910/dvn/1zak6z
title: Survei sosial ekonomi nasional 2017

description: Indonesian national socioeconomic survey, March 2017. In Indonesian.
DOI: 10.7910/dvn/1zak6z/f6kifw
title: Susenas 2017 Maret.zip

description: :unav
DOI: 10.5281/zenodo.3817080
title: Linked COVID-19 Data: Johns Hopkins University (JHU) and European Centre for Disease Prevention and Control (ECDC)

description: Linked COVID-19 Data derived from <strong>Johns Hopkins University</strong> and <strong>European Centre for Disease Prevention and Control</strong> using the COVID-19 Ontology 10.5281/zenodo.3757828 developed for the Linked COVID-19 Data Dashboard: http://covid19data.link This files include data for covid19_jhu.ttl - COVID-19 data collected by the JHU covid19_ecdc.ttl - COVID-19 data collected by the ECDC This RDF files are based on https://pomber.github.io/covid19/timeseries.json https://opendata.ecdc.europa.eu/covid19/casedistribution/json/
DOI: 10.5281/zenodo.3817081
title: Linked COVID-19 Data: Robert Koch-Institut (RKI)

description: Linked COVID-19 Data derived from <strong>Robert Koch Institute</strong> using the COVID-19 Ontology 10.5281/zenodo.3757828 developed for the Linked COVID-19 Data Dashboard: http://covid19data.link This files include data for covid19_rki*.ttl - single COVID-19 cases per day, collected by the RKI https://www.arcgis.com/home/item.html?id=dd4580c810204019a7b8eb3e0b329dd6 "confirmed" is calcaulated by the column "Refdatum" covid19_rki_ger.ttl - COVID-19 cases per day for Germany, collected by the RKI covid19_rki_ger_cum.ttl - COVID-19 cases accumulated per day for Germany, collected by the RKI covid19_rki_fs.ttl - COVID-19 cases per day for the federal states in Germany, collected by the RKI covid19_rki_fs_cum.ttl - COVID-19 cases accumulated per day for the federal states in Germany, collected by the RKI This RDF files are based on the NPGEO Corona Hub 2020 https://opendata.arcgis.com/datasets/dd4580c810204019a7b8eb3e0b329dd6_0.geojson https://npgeo-corona-npgeo-de.hub.arcgis.com/datasets/dd4580c810204019a7b8eb3e0b329dd6_0/data
DOI: 10.15468/4d45kk
title: Chapter 7: Linnaean Plant Names and their Types (part F)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part F). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 516-528, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/5wu5kd
title: Chapter 7: Linnaean Plant Names and their Types (part E)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part E). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 490-515, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/af2wgd
title: Chapter 7: Linnaean Plant Names and their Types (part D)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part D). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 474-489, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/bjw8km
title: Chapter 7: Linnaean Plant Names and their Types (part C)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part C). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 370-473, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.5281/zenodo.3817873
title: Using White-Box Test Generation During Development: A Replicated Study

description: This package contains the artifacts for our external, differentiated replication of an empirical study on using white-box test generation. The original experiment is described in the following paper. José Miguel Rojas, Gordon Fraser, and Andrea Arcuri. 2015. Automated unit test generation during software development: a controlled experiment and think-aloud observations. In Proceedings of the 2015 International Symposium on Software Testing and Analysis (ISSTA 2015), 338–349. DOI: 10.1145/2771783.2771801 30 developers and students participated in the experiment in January 2016. The main difference in the replication was using the IntelliTest test generator tool instead of EvoSuite. The contents of the package are the followings. /assignments session_starts_endings.csv - Timestamps when each session was started assignments_with_projects.csv - Assigments of participants to projects, classes and sessions /projects /golden - Contains the golden implementation and test suites of all 4 classes /user - Contains the user implementation and test method stubs of all 4 classs /results time_merged.csv - File of timing analysis containing each test run of subjects results.csv - Contains the coverage and other required data of each participant tasks exit.csv - Answers of the exit survey background.csv - Answers of the background questionnaire /scripts /ps Get-Results.ps1 - Gets the results of both tasks for one specified participant (invokes MSBuild, MSTest, VisualMutator, OpenCover) Get-Failures-Errors.ps1 - Gets failures and errors of both tasks for one specified participant (invokes MSBuild, MSTest) Get-TimeData.ps1 - Iterates over all test runs for each participant /r likert.R - Generates the Likert chart si_st.R - Generates table of subject implementation executed with subject test suites gi_st.R - Generates table of results where subject test suites was run on golden implementation time_spent_tests.R - Generates a table of time and activity of testing errors_failures.R - Generates table of errors and failures obtained using the golden test suite correlation_analysis.R - Generates table containing correlation between lack of correctness and IntelliTest usage
DOI: 10.5281/zenodo.3817874
title: Using White-Box Test Generation During Development: A Replicated Study

description: This package contains the artifacts for our external, differentiated replication of an empirical study on using white-box test generation. The original experiment is described in the following paper. José Miguel Rojas, Gordon Fraser, and Andrea Arcuri. 2015. Automated unit test generation during software development: a controlled experiment and think-aloud observations. In Proceedings of the 2015 International Symposium on Software Testing and Analysis (ISSTA 2015), 338–349. DOI: 10.1145/2771783.2771801 30 developers and students participated in the experiment in January 2016. The main difference in the replication was using the IntelliTest test generator tool instead of EvoSuite. The contents of the package are the followings. /assignments session_starts_endings.csv - Timestamps when each session was started assignments_with_projects.csv - Assigments of participants to projects, classes and sessions /projects /golden - Contains the golden implementation and test suites of all 4 classes /user - Contains the user implementation and test method stubs of all 4 classs /results time_merged.csv - File of timing analysis containing each test run of subjects results.csv - Contains the coverage and other required data of each participant tasks exit.csv - Answers of the exit survey background.csv - Answers of the background questionnaire /scripts /ps Get-Results.ps1 - Gets the results of both tasks for one specified participant (invokes MSBuild, MSTest, VisualMutator, OpenCover) Get-Failures-Errors.ps1 - Gets failures and errors of both tasks for one specified participant (invokes MSBuild, MSTest) Get-TimeData.ps1 - Iterates over all test runs for each participant /r likert.R - Generates the Likert chart si_st.R - Generates table of subject implementation executed with subject test suites gi_st.R - Generates table of results where subject test suites was run on golden implementation time_spent_tests.R - Generates a table of time and activity of testing errors_failures.R - Generates table of errors and failures obtained using the golden test suite correlation_analysis.R - Generates table containing correlation between lack of correctness and IntelliTest usage
DOI: 10.15468/ud4vjw
title: Chapter 7: Linnaean Plant Names and their Types (part G)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part G). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 529-556, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/rqakvg
title: Chapter 7: Linnaean Plant Names and their Types (part H)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part H). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 557-585, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/3wyjnh
title: Chapter 7: Linnaean Plant Names and their Types (part L)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part L). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 610-650, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/c835xu
title: Chapter 7: Linnaean Plant Names and their Types (part K)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part K). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 608-609, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/w8bg8e
title: Chapter 7: Linnaean Plant Names and their Types (part I)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part I). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 586-598, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/ccy2y9
title: Chapter 7: Linnaean Plant Names and their Types (part N)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part N). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 690-695, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/hft2yc
title: Chapter 7: Linnaean Plant Names and their Types (part O)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part O). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 696-717, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.15468/qnuc2r
title: Chapter 7: Linnaean Plant Names and their Types (part M)

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Jarvis, Charlie (2007): Chapter 7: Linnaean Plant Names and their Types (part M). In: Order out of Chaos. Linnaean Plant Types and their Types. London: Linnaean Society of London in association with the Natural History Museum: 651-689, ISBN: 978-0-9506207-7-0, DOI: https://doi.org/10.5281/zenodo.291971
DOI: 10.21227/dfnb-qn91
title: WHUBuilding Dataset

description: This aerial image dataset consists of more than 22,000 independent buildings extracted from aerial images with 0.0075 m spatial resolution and 450 km^2 covering in Christchurch, New Zealand. The most parts of aerial images are down-sampled to 0.3 m ground resolution and cropped into 8,189 non-overlapping tiles with 512* 512. These tiles make up the whole dataset. They are split into three parts: 4,736 tiles for training, 1,036 tiles for validation and 2,416 tiles for testing.
DOI: 10.21227/g0hv-0521
title: WHUBuilding Dataset

description: This aerial image dataset consists of more than 22,000 independent buildings extracted from aerial images with 0.0075 m spatial resolution and 450 km^2 covering in Christchurch, New Zealand. The most parts of aerial images are down-sampled to 0.3 m ground resolution and cropped into 8,189 non-overlapping tiles with 512* 512. These tiles make up the whole dataset. They are split into three parts: 4,736 tiles for training, 1,036 tiles for validation and 2,416 tiles for testing.
DOI: 10.15468/n86xx6
title: A taxonomic revision of seed harvester ants of the Tetramorium solidum group (Hymenoptera: Formicidae) in southern Africa

description: This dataset contains the digitized treatments in Plazi based on the original journal article Mbanyana, Nokuthula, Garcia, Francisco Hita, Robertson, Hamish Gibson, Roux, Johannes Jacobus Le (2018): A taxonomic revision of seed harvester ants of the Tetramorium solidum group (Hymenoptera: Formicidae) in southern Africa. European Journal of Taxonomy 454: 1-59, DOI: https://doi.org/10.5852/ejt.2018.454
DOI: 10.5281/zenodo.3817983
title: BigFuzz: Efficient Fuzz Testing for Data Analytics using Framework Abstraction

description: BigFuzz supplementary material.
DOI: 10.5281/zenodo.3817984
title: BigFuzz: Efficient Fuzz Testing for Data Analytics using Dataflow Abstraction

description: BigFuzz supplementary material.
DOI: 10.5281/zenodo.3817075
title: HiC matrices from Sungalee et al. for lymphoma cell lines

description: <strong>Hi-C datasets</strong> generated in Sungalee et al. are provided as intra-chromosomal contact lists and matrices, divided by cell line/condition and chromosome. The following lymphoma cell lines/conditions are available:<br> - WSU-DLCL2 (WSU_A485 treatment) - Karpas-422 (Karpas422_A485 treatment) Contact lists are provided as compressed plain-text files in which each row represents a Hi-C contact. Column fields are described below:<br> 1) strand of read 1 (0=forward, 16=reverse)<br> 2) chromosome of read 1<br> 3) position on the chromosome where read 1 aligned<br> 4) strand of read 2 (0=forward, 16=reverse)<br> 5) chromosome of read 2<br> 6) position on the chromosome where read 2 aligned<br> 7) mapping quality of read 1<br> 8) name of the read pair as seen in the FASTQ files<br> 9) mapping quality of read 2