cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3393706.v2
title: TDO datasets archives

description: <b>BirhtPlace and Genre</b> <b>datasets</b> used in the experiments presented in the paper “<i>How Can Ontologies Give You Clue for Truth-Discovery? An Exploratory Study</i>”. Valentina Beretta, Sébastien Harispe, Sylvie Ranwez, Isabelle Mougenot. To be published in the proceedings of WIMS 2016.Source code is available at https://github.com/valentinaberetta/TDO
DOI: 10.17045/sthlmuni.3393493
title: Tarfala daily mean temperature series 1965-

description: This data set consists of daily mean temperatures recorded at Tarfala Research Station since 1965. The record is an assembly of automatically recoded air temperatures. Measurement devices have changed over time as the equipment has been modernized. Please refer to the annual meteorological measurements reported from Tarfala Reseearch Station for more detailed information. The data is provided as is. The data includes breaks indicated by a "Not-a-Number", "NaN" value. Since 1995, the Swedish Meteorological and Hydrological Institute, SMHI, maintains an official station (Tarfala A; Climate number: 178970; WMO-number: 2-29) in close proximity to the Tarfala meteorological site. It is therefore possible to use data from the SMHI station to fill in gaps in the TRS record.<br>
DOI: 10.17045/sthlmuni.3393493.v1
title: Tarfala daily mean temperature series 1965-

description: This data set consists of daily mean temperatures recorded at Tarfala Research Station since 1965. The record is an assembly of automatically recoded air temperatures. Measurement devices have changed over time as the equipment has been modernized. Please refer to the annual meteorological measurements reported from Tarfala Reseearch Station for more detailed information. The data is provided as is. The data includes breaks indicated by a "Not-a-Number", "NaN" value. Since 1995, the Swedish Meteorological and Hydrological Institute, SMHI, maintains an official station (Tarfala A; Climate number: 178970; WMO-number: 2-29) in close proximity to the Tarfala meteorological site. It is therefore possible to use data from the SMHI station to fill in gaps in the TRS record.<br>
DOI: 10.6084/m9.figshare.3391885
title: Leislers?

description: Is there enough to confirm a species?
DOI: 10.6084/m9.figshare.3391885.v2
title: Leislers?

description: Is there enough to confirm a species?
DOI: 10.6084/m9.figshare.3391885.v1
title: Leislers?

description: Is there enough to confirm a species?
DOI: 10.6084/m9.figshare.3391822
title: Hydrological Impacts of Land Use Change and Climate Variability in the Headwater Region of the Heihe River Basin, Northwest China

description: All data and related metadata underlying the findings reported in our submitted manuscript entitled "Hydrological Impacts of Land Use Change and Climate Variability in the Headwater Region of the Heihe River Basin, Northwest China" to PLOS ONE are deposited here. For more information, please refer to this MS.
DOI: 10.6084/m9.figshare.3391822.v1
title: Publish Data

description: All data and related metadata underlying the findings reported in our submitted manuscript entitled "Hydrological Impacts of Land Use Change and Climate Variability in the Headwater Region of the Heihe River Basin, Northwest China" to PLOS ONE are deposited here.
DOI: 10.6084/m9.figshare.3391822.v3
title: Hydrological Impacts of Land Use Change and Climate Variability in the Headwater Region of the Heihe River Basin, Northwest China

description: All data and related metadata underlying the findings reported in our submitted manuscript entitled "Hydrological Impacts of Land Use Change and Climate Variability in the Headwater Region of the Heihe River Basin, Northwest China" to PLOS ONE are deposited here. For more information, please refer to this MS.
DOI: 10.6084/m9.figshare.3391822.v2
title: Hydrological Impacts of Land Use Change and Climate Variability in the Headwater Region of the Heihe River Basin, Northwest China

description: All data and related metadata underlying the findings reported in our submitted manuscript entitled "Hydrological Impacts of Land Use Change and Climate Variability in the Headwater Region of the Heihe River Basin, Northwest China" to PLOS ONE are deposited here. For more information, please refer to this MS.
DOI: 10.22008/fk2/do2kkp/adsdep
title: 4630-Supplementary Material-S2.xls

description: Macrofossil analyses of samples from Lammefjorden. August 2017. Ole Bennike. To accompany Bennike et al. 2020.
DOI: 10.22008/fk2/do2kkp/ohunrf
title: 4630-Supplementary Material-S3.pdf

description: Notes on samples from the Lammefjordskanal, collected by Peter Roll Jacobsen January 2019, analysed by Ole Bennike
DOI: 10.22008/fk2/do2kkp/fbsw4v
title: 4630-Supplementary Material-S5.jpg

description: Radiocarbon ages from Lammefjorden plotted against elevation
DOI: 10.22008/fk2/do2kkp/9uiwco
title: 4630-Supplementary Material-S1.pdf

description: Radiocarbon ages for Lammefjorden, Denmark.
DOI: 10.22008/fk2/do2kkp/gdodzk
title: 4630-Supplementary Material-S4.jpg

description: Simplified log for site A, Lammefjord, Denmark.
DOI: 10.6084/m9.figshare.3388903
title: Tables in csv format

description: csv files created from this Google Sheets https://docs.google.com/spreadsheets/d/1-Oar5kaox0dkvMlE1OyoA_omb8ttb6t1gbfilq8ty9M/edit?usp=sharing
DOI: 10.22008/fk2/do2kkp/cghzyv
title: 4630-Supplementary Material-Methods.pdf

description: Written description of methods
DOI: 10.6084/m9.figshare.3386392
title: GENOME_Capsaspora_annotations.fasta

description: Annotation of some C. owczarzaki genes
DOI: 10.6084/m9.figshare.3386392.v2
title: GENOME_Capsaspora_annotations.fasta

description: Annotation of some C. owczarzaki genes
DOI: 10.6084/m9.figshare.3386392.v1
title: GENOMEmendoza.fasta

description: Annotation of some C. owczarzaki genes
DOI: 10.6084/m9.figshare.3386329
title: The spread of social energy

description: <br>osf.io/sgrxm
DOI: 10.6084/m9.figshare.3386329.v1
title: The spread of social energy

description: <br>osf.io/sgrxm
DOI: 10.6084/m9.figshare.3386311
title: Quartz types of the Eocene Broken River Formation, Mount Somers, South Island, New Zealand

description: Quartz arenites are a very common geological feature on the South Island of New Zealand. The provenance of the quartz grains that form these arenites is not well constrained because standard point-counting techniques do not provide enough detailed information. In this study we distinguish different quartz types using scanning electron microscopy–cathodoluminescence combined with standard optical microscopy on the same individual quartz grains. This is done on a suite of samples collected from shallow marine quartz arenites of the Paleocene–Eocene Blondin Sand Member of the Broken River Formation (Eyre Group) at Mt Somers in the Canterbury basin on the South Island of New Zealand. Our results show that the volcanic quartz grains were derived from local volcanic source rocks, whereas metamorphic quartz grains may have been derived from either local source rocks of the Torlesse Supergroup or from distant metamorphic sources rocks via longshore transport. Plutonic quartz grains were exclusively derived by long-distance transport. Warm and humid climatic conditions and the presence of humic acids in the associated coal-forming depositional environment probably increased the proportion of quartz in the sampled rocks.
DOI: 10.6084/m9.figshare.3386311.v1
title: Quartz types of the Eocene Broken River Formation, Mount Somers, South Island, New Zealand

description: Quartz arenites are a very common geological feature on the South Island of New Zealand. The provenance of the quartz grains that form these arenites is not well constrained because standard point-counting techniques do not provide enough detailed information. In this study we distinguish different quartz types using scanning electron microscopy–cathodoluminescence combined with standard optical microscopy on the same individual quartz grains. This is done on a suite of samples collected from shallow marine quartz arenites of the Paleocene–Eocene Blondin Sand Member of the Broken River Formation (Eyre Group) at Mt Somers in the Canterbury basin on the South Island of New Zealand. Our results show that the volcanic quartz grains were derived from local volcanic source rocks, whereas metamorphic quartz grains may have been derived from either local source rocks of the Torlesse Supergroup or from distant metamorphic sources rocks via longshore transport. Plutonic quartz grains were exclusively derived by long-distance transport. Warm and humid climatic conditions and the presence of humic acids in the associated coal-forming depositional environment probably increased the proportion of quartz in the sampled rocks.
DOI: 10.6084/m9.figshare.3386260
title: Dethreading Processes of Rotaxanes -Supporting Information (article DOI: 10.1002/cphc.201501160)

description: Supporting information for the article Dethreading of a photoactive azobenzene-containing molecular axle from a crown ether ring: a computational investigationby Gloria Tabacchi · Serena Silvi · Margherita Venturi · Alberto Credi ·Ettore FoisDOI: 10.1002/cphc.201501160
DOI: 10.6084/m9.figshare.3386260.v1
title: Dethreading Processes of Rotaxanes -Supporting Information (article DOI: 10.1002/cphc.201501160)

description: Supporting information for the article Dethreading of a photoactive azobenzene-containing molecular axle from a crown ether ring: a computational investigationby Gloria Tabacchi · Serena Silvi · Margherita Venturi · Alberto Credi ·Ettore FoisDOI: 10.1002/cphc.201501160
DOI: 10.6084/m9.figshare.3386254.v1
title: 3 March 2015 MVI_0309 Discussion

description: Discussion notes on video MVI_0309 taken on 3 March 2015. A short segment of this video documents a live observation.<br>The video is re-posted here along with a format conversion and a slowed and enlarged segment. Cropped and color adjusted enlargements of the most relevant frames are also posted here. These are for convenience only - the data of record is the video itself in the original 1080p HD .MOV format. Also for convenience, a complete set of original frames extracted from this video is posted in a separate folder labelled "3 March 2015 MVI_0309 Original Frames."<br>The original video is also located in the 3 March 2015 Field Notes folder. See also 3 March 2015 Field Notes for additional details on the data collection.<br>
DOI: 10.6084/m9.figshare.3386254.v2
title: 3 March 2015 MVI_0309 Discussion

description: Discussion notes on video MVI_0309 taken on 3 March 2015.<br>The video is re-posted here along with a format conversion and a slowed and enlarged segment. Cropped and color adjusted enlargements of the most relevant frames are also posted here. These are for convenience only - the data of record is the video itself in the original 1080p HD .MOV format. Also for convenience, a complete set of original frames extracted from this video is posted in a separate folder labelled "3 March 2015 MVI_0309 Original Frames."<br>The original video is also located in the 3 March 2015 Field Notes folder. See also 3 March 2015 Field Notes for additional details on the data collection.<br>
DOI: 10.6084/m9.figshare.3386248
title: 2015 03 03 MVI_0309 Original Frames

description: Every frame of MVI_0309 taken on 3 March 2015. Frames are extracted using IrfanView 4.42 software.<br><br>Project order 61a<br>
DOI: 10.6084/m9.figshare.3386248.v2
title: 2015 03 03 MVI_0309 Original Frames

description: Every frame of MVI_0309 taken on 3 March 2015. Frames are extracted using IrfanView 4.42 software.<br><br>Project order 61a<br>
DOI: 10.6084/m9.figshare.3386248.v1
title: 3 March 2015 MVI_0309 Original Frames

description: Every frame of MVI_0309 taken on 3 March 2015. Frames are extracted using IrfanView 4.42 software.<br>
DOI: 10.6084/m9.figshare.3386182
title: Alleviating salt stress in tomato seedlings using <i>Arthrobacter</i> and <i>Bacillus</i> <i>megaterium</i> isolated from the rhizosphere of wild plants grown on saline–alkaline lands

description: Salt-induced soil degradation is common in farmlands and limits the growth and development of numerous crop plants in the world. In this study, we isolated salt-tolerant bacteria from the rhizosphere of <i>Tamarix chinensis</i>, <i>Suaeda salsa</i> and <i>Zoysia sinica</i>, which are common wild plants grown on a saline–alkaline land, to test these bacteria's efficiency in alleviating salt stress in tomato plants. We screened out seven strains (TF1–7) that are efficient in reducing salt stress in tomato seedlings. The sequence data of 16S rRNA genes showed that these strains belong to <i>Arthrobacter</i> and <i>Bacillus megaterium</i>. All strains could hydrolyze casein and solubilize phosphate, and showed at least one plant growth promotion (PGP)-related gene, indicating their potential in promoting plant growth. The <i>Arthrobacter</i> strains TF1 and TF7 and the <i>Bacillus megaterium</i> strain TF2 and TF3 could produce indole acetic acid under salt stress, further demonstrating their PGP potential. Tomato seed germination, seedling length, vigor index, and plant fresh and dry weight were enhanced by inoculation of <i>Arthrobacter</i> and <i>B. megaterium</i> strains under salt stress. Our results demonstrated that salt-tolerant bacteria isolated from the rhizosphere of wild plants grown on saline–alkaline lands could be used for alleviating salt stress in crop plants.
DOI: 10.6084/m9.figshare.3386182.v2
title: Alleviating salt stress in tomato seedlings using <i>Arthrobacter</i> and <i>Bacillus</i> <i>megaterium</i> isolated from the rhizosphere of wild plants grown on saline–alkaline lands

description: Salt-induced soil degradation is common in farmlands and limits the growth and development of numerous crop plants in the world. In this study, we isolated salt-tolerant bacteria from the rhizosphere of <i>Tamarix chinensis</i>, <i>Suaeda salsa</i> and <i>Zoysia sinica</i>, which are common wild plants grown on a saline–alkaline land, to test these bacteria's efficiency in alleviating salt stress in tomato plants. We screened out seven strains (TF1–7) that are efficient in reducing salt stress in tomato seedlings. The sequence data of 16S rRNA genes showed that these strains belong to <i>Arthrobacter</i> and <i>Bacillus megaterium</i>. All strains could hydrolyze casein and solubilize phosphate, and showed at least one plant growth promotion (PGP)-related gene, indicating their potential in promoting plant growth. The <i>Arthrobacter</i> strains TF1 and TF7 and the <i>Bacillus megaterium</i> strain TF2 and TF3 could produce indole acetic acid under salt stress, further demonstrating their PGP potential. Tomato seed germination, seedling length, vigor index, and plant fresh and dry weight were enhanced by inoculation of <i>Arthrobacter</i> and <i>B. megaterium</i> strains under salt stress. Our results demonstrated that salt-tolerant bacteria isolated from the rhizosphere of wild plants grown on saline–alkaline lands could be used for alleviating salt stress in crop plants.
DOI: 10.6084/m9.figshare.3386143
title: Datesets for Chang, Zhou, Liu (2016, PLoS ONE)

description: To be published in PLoS ONE.
DOI: 10.6084/m9.figshare.3386065
title: Sequences of gyrA and gyr B of some H. pylori strains

description: Sequences of <i>gyr</i>A and <i>gyr</i>B genes of some <i>H. pylori</i> isoles of the paper submitted to Plos One (2016) entitle “<b>Surveillance of levofloxacin resistance in <i>Helicobacter pylori</i> isolates in Bogotá-Colombia (2009-2014)</b>”
DOI: 10.6084/m9.figshare.3386062.v1
title: BLM herbicide usage data, Wagner et al. (2016b)

description: BLM herbicide usage data used in the publication<br><br>"Wagner, V., Antunes, P.M., Irvine, M., Nelson, C.R. (2016) Herbicide usage for invasive non-native plant management in wildland areas of North America. Journal of Applied Ecology"<br><br>The data are summaries provided by the BLM for the purpose of the study. <br><br>See accompanying R script (10.6084/m9.figshare.3386032) and publication for more details on data preparation and analysis.<br>
DOI: 10.6084/m9.figshare.3386014
title: Revisiting the revisit: added evidence for a social chemosignal in human emotional tears

description: In a study by Gelstein et al., we found that human emotional tears act as a social chemosignal. In the first of three different experiments in that study we observed that sniffing women’s emotional tears reduced the sexual attractiveness attributed by men to pictures of women’s faces. In a study partly titled “Chemosignaling effects of human tears revisited”, Gračanin et al. claim failed replication of this effect in a series of experiments, one they described as “exactly the same procedure” as Gelstein. Given that Gračanin et al. refused our extended offer to jointly replicate the experiment at our expense, we can merely comment on their effort. We find that Gračanin, who are not a chemosignaling laboratory, used methodology that falls short of standards typically applied in chemosignaling research. Thus, their experiments were profoundly different from Gelstein. Finally, we found that in reanalysing their raw data we could in fact replicate the effect from Gelstein. Thus, we conclude that the failed replication in Gračanin is neither a replication nor failed.
DOI: 10.6084/m9.figshare.3386014.v1
title: Revisiting the revisit: added evidence for a social chemosignal in human emotional tears

description: In a study by Gelstein et al., we found that human emotional tears act as a social chemosignal. In the first of three different experiments in that study we observed that sniffing women’s emotional tears reduced the sexual attractiveness attributed by men to pictures of women’s faces. In a study partly titled “Chemosignaling effects of human tears revisited”, Gračanin et al. claim failed replication of this effect in a series of experiments, one they described as “exactly the same procedure” as Gelstein. Given that Gračanin et al. refused our extended offer to jointly replicate the experiment at our expense, we can merely comment on their effort. We find that Gračanin, who are not a chemosignaling laboratory, used methodology that falls short of standards typically applied in chemosignaling research. Thus, their experiments were profoundly different from Gelstein. Finally, we found that in reanalysing their raw data we could in fact replicate the effect from Gelstein. Thus, we conclude that the failed replication in Gračanin is neither a replication nor failed.
DOI: 10.6084/m9.figshare.3385924
title: Validating self-reporting of hearing-related symptoms against pure-tone audiometry, otoacoustic emission, and speech audiometry

description: <i>Objective</i>: To validate self-reported hearing-related symptoms among personnel exposed to moderately high occupational noise levels at an obstetrics clinic. <i>Design</i>: Sensitivity, specificity, and predictive values were calculated for questionnaire items assessing hearing loss, tinnitus, sound sensitivity, poor hearing, difficulty perceiving speech, and sound-induced auditory fatigue. Hearing disorder was diagnosed by pure-tone audiometry, distortion product otoacoustic emissions, and HINT (Hearing In Noise Test). <i>Study sample</i>: Fifty-five female obstetrics personnel aged 22–63 participated; including 26 subjects reporting hearing loss, poor hearing, tinnitus, or sound sensitivity, and 29 randomly selected subjects who did not report these symptoms. <i>Results</i>: The questionnaire item assessing sound-induced auditory fatigue had the best combination of sensitivity ≥85% (95% CIs 56 to 100%) and specificity ≥70% (95% CIs 55 to 84%) for hearing disorder diagnosed by audiometry or otoacoustic emission. Of those reporting sound-induced auditory fatigue 71% were predicted to have disorder diagnosed by otoacoustic emission. Participants reporting any hearing-related symptom had slightly worse measured hearing. <i>Conclusions</i>: We suggest including sound-induced auditory fatigue in questionnaires for identification of hearing disorder among healthcare personnel, though larger studies are warranted for precise estimates of diagnostic performance. Also, more specific and accurate hearing tests are needed to diagnose mild hearing disorder.
DOI: 10.6084/m9.figshare.3385924.v2
title: Validating self-reporting of hearing-related symptoms against pure-tone audiometry, otoacoustic emission, and speech audiometry

description: <i>Objective</i>: To validate self-reported hearing-related symptoms among personnel exposed to moderately high occupational noise levels at an obstetrics clinic. <i>Design</i>: Sensitivity, specificity, and predictive values were calculated for questionnaire items assessing hearing loss, tinnitus, sound sensitivity, poor hearing, difficulty perceiving speech, and sound-induced auditory fatigue. Hearing disorder was diagnosed by pure-tone audiometry, distortion product otoacoustic emissions, and HINT (Hearing In Noise Test). <i>Study sample</i>: Fifty-five female obstetrics personnel aged 22–63 participated; including 26 subjects reporting hearing loss, poor hearing, tinnitus, or sound sensitivity, and 29 randomly selected subjects who did not report these symptoms. <i>Results</i>: The questionnaire item assessing sound-induced auditory fatigue had the best combination of sensitivity ≥85% (95% CIs 56 to 100%) and specificity ≥70% (95% CIs 55 to 84%) for hearing disorder diagnosed by audiometry or otoacoustic emission. Of those reporting sound-induced auditory fatigue 71% were predicted to have disorder diagnosed by otoacoustic emission. Participants reporting any hearing-related symptom had slightly worse measured hearing. <i>Conclusions</i>: We suggest including sound-induced auditory fatigue in questionnaires for identification of hearing disorder among healthcare personnel, though larger studies are warranted for precise estimates of diagnostic performance. Also, more specific and accurate hearing tests are needed to diagnose mild hearing disorder.
DOI: 10.6084/m9.figshare.3385906
title: Bayesian codon substitution modeling to identify sources of pathogen evolutionary rate variation

description: Figures 1-4 as published in <i>Microbial Genomics</i> in the following article: 'Bayesian codon substitution modeling to identify sources of pathogen evolutionary rate variation' [10.1099/mgen.0.000057]
DOI: 10.6084/m9.figshare.3385906.v1
title: Bayesian codon substitution modeling to identify sources of pathogen evolutionary rate variation

description: Figures 1-4 as published in <i>Microbial Genomics</i> in the following article: 'Bayesian codon substitution modeling to identify sources of pathogen evolutionary rate variation' [10.1099/mgen.0.000057]
DOI: 10.6084/m9.figshare.3385861.v1
title: Transcriptomic Analysis of Staphylococcal sRNAs: Insights into Species Specific Adaption and the Evolution of Pathogenesis

description: Supplementary files as published in <i>Microbial Genomics</i> in the following article: 'Transcriptomic Analysis of Staphylococcal sRNAs: Insights into Species Specific Adaption and the Evolution of Pathogenesis' [10.1099/mgen.0.000065]
DOI: 10.6084/m9.figshare.3385828
title: Fresno Aerial USGS Imagery from the Distributed Solar Photovoltaic Array Location and Extent Data Set

description: This collection of USGS Orthoimagery data contains the .tif images files and associated .xml metadata files for the Fresno, CA imagery data from the dataset:<br>Bradbury, Kyle; Saboo, Raghav; Malof, Jordan; Johnson, Timothy; Devarajan, Arjun; Zhang, Wuming; Collins, Leslie; Newell, Richard: Distributed Solar Photovoltaic Array Location and Extent Data Set for Remote Sensing Object Identification. figshare. https://dx.doi.org/10.6084/m9.figshare.3385780<br>Acknowledgement: Data available from the U.S. Geological Survey. See USGS Visual Identity System Guidance (https://www2.usgs.gov/visual-id/credit_usgs.html) for further details.