cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9944216
title: Contrast normalisation masks naturalexpression-related differences and artificiallyenhances the perceived salience of fearexpressions.

description: Three datasets: <br>Set 1: 'allphysicalblmdrms.xlsm' file. This is RMS contrast values measured for 140 KDEF face images of 5 facial expressions (neutral, fear, anger, happiness, disgust). Each expression has an RMS contrast value at each level of spatial frequency filtering (broad, low-, mid-, high-range spatial frequency). <br>Set 2: 'amplitude_slope_data.xlsx' file. This is the averaged amplitude slopes for each facial expression, pooled across 140 KDEF faces. <br>Set 3: Behavioural data from 19 observers. The amount of physical contrast required for each expression to perceptually match a reference target (whose Michelson contrast is set permanently at 10%). <br>File 'RMS_matching-bsf-data.sav': apparent contrast values for 5 broadband expressions when upright and invertedFile 'RMS_matching-lsf-data.sav': apparent contrast values for 5 low-frequency filtered expressions when upright and inverted<br>File 'RMS_matching-msf-data.sav': apparent contrast values for 5 mid-range frequency filtered expressions when upright and inverted<br>File 'RMS_matching-hsf-data.sav': apparent contrast values for 5 ghih frequency filtered expressions when upright and inverted<br><br>Set 4: 'skewness_all.xlsx' This is an excel file containing average skew values obtained from 16 KDDEF faces. These are provided for 4 frequency conditions (intact, low, mid, and high). Sheet 1 is the data for upright, natural images of faces (internal features only, grayscale). Data for their manipulated versions are available on sheet 2. This includes skew values for manipulated faces: those that were inverted by 180 deg and subjected to reversed luminance polarity. Faces were also internally cropped and grayscale.
DOI: 10.6084/m9.figshare.9944303.v4
title: Supplementary Material for: Metadata Concepts for Advancing the Use of Digital Health Technologies in Clinical Research

description: Digital health technologies (smartphones, smartwatches, and other body-worn sensors) can act as novel tools to aid in the diagnosis and remote objective monitoring of an individual’s disease symptoms, both in clinical care and in research. Nonetheless, such digital health technologies have yet to widely demonstrate value in clinical research due to insufficient data interpretability and lack of regulatory acceptance. Metadata, i.e., data that accompany and describe the primary data, can be utilized to better understand the context of the sensor data and can assist in data management, data sharing, and subsequent data analysis. The need for data and metadata standards for digital health technologies has been raised in academic and industry research communities and has also been noted by regulatory authorities. Therefore, to address this unmet need, we here propose a metadata set that reflects regulatory guidelines and that can serve as a conceptual map to (1) inform researchers on the metadata they should collect in digital health studies, aiming to increase the interpretability and exchangeability of their data, and (2) direct standard development organizations on how to extend their existing standards to incorporate digital health technologies. The proposed metadata set is informed by existing standards pertaining to clinical trials and medical devices, in addition to existing schemas that have supported digital health technology studies. We illustrate this specifically in the context of Parkinson’s disease, as a model for a wide range of other chronic conditions for which remote monitoring would be useful in both care and science. We invite the scientific and clinical research communities to apply the proposed metadata set to ongoing and planned research. Where the proposed metadata fall short, we ask users to contribute to its ongoing revision so that an adequate degree of consensus can be maintained in a rapidly evolving technology landscape.
DOI: 10.6084/m9.figshare.9944165
title: ES2019.csv

description: Biometric and physiological dataset on European starling chicks<br>
DOI: 10.6084/m9.figshare.9944303.v5
title: Supplementary Material for: Metadata Concepts for Advancing the Use of Digital Health Technologies in Clinical Research

description: Digital health technologies (smartphones, smartwatches, and other body-worn sensors) can act as novel tools to aid in the diagnosis and remote objective monitoring of an individual’s disease symptoms, both in clinical care and in research. Nonetheless, such digital health technologies have yet to widely demonstrate value in clinical research due to insufficient data interpretability and lack of regulatory acceptance. Metadata, i.e., data that accompany and describe the primary data, can be utilized to better understand the context of the sensor data and can assist in data management, data sharing, and subsequent data analysis. The need for data and metadata standards for digital health technologies has been raised in academic and industry research communities and has also been noted by regulatory authorities. Therefore, to address this unmet need, we here propose a metadata set that reflects regulatory guidelines and that can serve as a conceptual map to (1) inform researchers on the metadata they should collect in digital health studies, aiming to increase the interpretability and exchangeability of their data, and (2) direct standard development organizations on how to extend their existing standards to incorporate digital health technologies. The proposed metadata set is informed by existing standards pertaining to clinical trials and medical devices, in addition to existing schemas that have supported digital health technology studies. We illustrate this specifically in the context of Parkinson’s disease, as a model for a wide range of other chronic conditions for which remote monitoring would be useful in both care and science. We invite the scientific and clinical research communities to apply the proposed metadata set to ongoing and planned research. Where the proposed metadata fall short, we ask users to contribute to its ongoing revision so that an adequate degree of consensus can be maintained in a rapidly evolving technology landscape.
DOI: 10.17637/rh.9944153
title: Time-series analysis of varve thickness data

description: This data package comprises two datasets. <br>1) Time-series analysis of glacial varve thickness data from Lago General Carrera (Chile)–Buenos Aires (Argentina) in Patagonia, southern South America. This analysis was carried out using the Fenix Chico Master Varve Chronology (FCMC17) developed by Bendle et al. (2017).<br>2) Time-series analysis of modern climate indices for comparison to the varve time-series results.
DOI: 10.6084/m9.figshare.9944165.v1
title: ES2019.csv

description: Biometric and physiological dataset on European starling chicks<br>
DOI: 10.6084/m9.figshare.9944126
title: Abia2019EJTmatrix

description: Datamatrix of morphological character set for analyzing phylogeny of Cimbicidae (Hymenoptera)
DOI: 10.6084/m9.figshare.9944129
title: A new baenid turtle, <i>Saxochelys gilberti</i>, gen. et sp. nov., from the uppermost cretaceous (Maastrichtian) Hell Creek Formation: sexual dimorphism and spatial niche partitioning within the most speciose group of Late Cretaceous turtles

description: The uppermost Cretaceous (Maastrichtian) Hell Creek Formation in North America has yielded a diverse assemblage of fossil turtles dominated by baenids. A population of over 30 individual skeletons from the Hell Creek Formation of North Dakota comprises a new baenid turtle, <i>Saxochelys gilberti</i>, increasing the number of recognized Hell Creek turtles to at least 26, 11 of which are baenids. <i>Saxochelys gilberti</i> is differentiated from all other baenids based on the presence of a nuchal scale, finely sculptured shell, absence of an omega-shaped femoral-anal sulcus, presence of an omega-shaped extragular-humeral sulcus, a cavum tympani that is relatively smaller than the diameter of the orbit, presence of a robust single scale on the posteromedial portion of the parietals, and jugal exclusion from the orbital margin. Two distinct plastral morphologies, concave (N = 8) and flat (N = 9), are interpreted as representing male and female individuals, respectively. A ca. 10% size difference between the sexes indicates that <i>S. gilberti</i> is a sexually size-dimorphic turtle with larger females. This suggests female mate choice in this baenid turtle. A referred <i>S. gilberti</i> skeleton from above the Cretaceous–Paleogene boundary provides evidence for the survival of yet another species of turtle across this extinction event. The type locality of <i>S. gilberti</i> is close both stratigraphically and geographically to another locality consisting of a completely different assortment of baenid species, suggesting a fine degree of spatial niche partitioning in baenid turtles that may help explain the extremely high diversity of the group within the Hell Creek Formation.
DOI: 10.6084/m9.figshare.9944126.v1
title: Abia2019EJTmatrix

description: Datamatrix of morphological character set for analyzing phylogeny of Cimbicidae (Hymenoptera)
DOI: 10.6084/m9.figshare.9944129.v1
title: A new baenid turtle, <i>Saxochelys gilberti</i>, gen. et sp. nov., from the uppermost Cretaceous (Maastrichtian) Hell Creek Formation: sexual dimorphism and spatial niche partitioning within the most speciose group of Late Cretaceous turtles

description: The uppermost Cretaceous (Maastrichtian) Hell Creek Formation in North America has yielded a diverse assemblage of fossil turtles dominated by baenids. A population of over 30 individual skeletons from the Hell Creek Formation of North Dakota comprises a new baenid turtle, <i>Saxochelys gilberti</i>, increasing the number of recognized Hell Creek turtles to at least 26, 11 of which are baenids. <i>Saxochelys gilberti</i> is differentiated from all other baenids based on the presence of a nuchal scale, finely sculptured shell, absence of an omega-shaped femoral-anal sulcus, presence of an omega-shaped extragular-humeral sulcus, a cavum tympani that is relatively smaller than the diameter of the orbit, presence of a robust single scale on the posteromedial portion of the parietals, and jugal exclusion from the orbital margin. Two distinct plastral morphologies, concave (N = 8) and flat (N = 9), are interpreted as representing male and female individuals, respectively. A ca. 10% size difference between the sexes indicates that <i>S. gilberti</i> is a sexually size-dimorphic turtle with larger females. This suggests female mate choice in this baenid turtle. A referred <i>S. gilberti</i> skeleton from above the Cretaceous–Paleogene boundary provides evidence for the survival of yet another species of turtle across this extinction event. The type locality of <i>S. gilberti</i> is close both stratigraphically and geographically to another locality consisting of a completely different assortment of baenid species, suggesting a fine degree of spatial niche partitioning in baenid turtles that may help explain the extremely high diversity of the group within the Hell Creek Formation.
DOI: 10.6084/m9.figshare.9944087
title: Function annotation of Takifugu flavidus genome genes

description: Function annotation ressult of Takifugu flavidus genome genes
DOI: 10.25392/leicester.data.9944090
title: Mars North Pole Edifices Profiles

description: This data set contains geophysics derived data from the MOLA altimeter on board Mars Global Surveyor mission. It contains morphometric information, as well as topographic profiles from 201 edifices (positive topographic elevations) analysed from the North Polar region of Mars. Specifically, from the Scandia Cavi and Olympia Undae regions.<br> <b>This data set accompanies the following paper:</b> Sánchez-Bayton, M., Tréguier, E., Herraiz, M., Martin, P., Kereszturi, A., and Sánchez-Cano, B., (2019), New Landforms in Scandia Cavi and Olympia Undae, North Polar Region of Mars. Discrimination of possible volcanoes edifices. Journal of Geophysical Research Planets, 124, (awaiting for DOI).<br> <b>Abstract:</b> A survey of edifices on Olympia Undae sand sea and Scandia Cavi in the northern circumpolar region of Mars has been performed using images from Mars Express, Mars Global Surveyor, and Mars Reconnaissance Orbiter. These are key areas for the evolution of the Northern Polar cap as they can cast light on the gypsum formation process that occur in there, which is essential for liquid water. This study has led to identifying 201 elevated edifices,<i> </i>more than 90% of them not classified before, with diameters between 6 and 86 km. Considering their morphometric parameters and image-based appearances, these positive topographic features have been classified into five categories: cratered cones, impact craters, and simple, irregular, and peaked domes. Cratered cones and impact craters include all crater shaped edifices and are far more numerous than the dome-shaped ones. 100 of 130 crater-shaped edifices are probably not impact craters, although can be erroneously taken as eroded remnants of earlier craters of this type. Regarding their origin, different types of formation processes are evaluated.<i> </i>There is not a unique definite origin as they could be explained by various causes, such as impact craters, mud domes, pingos and volcanic activity, although the main cause seems to be either hydrothermal or volcanic nature. The formation mechanism and their potential role on volcanic activity can cast light on the geological evolution of this region and its ice and water-related history, which might be connected to the formation of gypsum and to the volcanic deposits found inside craters. <br>
DOI: 10.6084/m9.figshare.9944057
title: PDT and Fairness

description: Parental Differential Treatment, Fairness Perception and Personality
DOI: 10.6084/m9.figshare.9944057.v1
title: PDT and Fairness

description: Parental Differential Treatment, Fairness Perception and Personality
DOI: 10.25392/leicester.data.9944090.v1
title: Mars North Pole Edifices Profiles

description: This data set contains geophysics derived data from the MOLA altimeter on board Mars Global Surveyor mission. It contains morphometric information, as well as topographic profiles from 201 edifices (positive topographic elevations) analysed from the North Polar region of Mars. Specifically, from the Scandia Cavi and Olympia Undae regions.<br> <b>This data set accompanies the following paper:</b> Sánchez-Bayton, M., Tréguier, E., Herraiz, M., Martin, P., Kereszturi, A., and Sánchez-Cano, B., (2019), New Landforms in Scandia Cavi and Olympia Undae, North Polar Region of Mars. Discrimination of possible volcanoes edifices. Journal of Geophysical Research Planets, 124, (awaiting for DOI).<br> <b>Abstract:</b> A survey of edifices on Olympia Undae sand sea and Scandia Cavi in the northern circumpolar region of Mars has been performed using images from Mars Express, Mars Global Surveyor, and Mars Reconnaissance Orbiter. These are key areas for the evolution of the Northern Polar cap as they can cast light on the gypsum formation process that occur in there, which is essential for liquid water. This study has led to identifying 201 elevated edifices,<i> </i>more than 90% of them not classified before, with diameters between 6 and 86 km. Considering their morphometric parameters and image-based appearances, these positive topographic features have been classified into five categories: cratered cones, impact craters, and simple, irregular, and peaked domes. Cratered cones and impact craters include all crater shaped edifices and are far more numerous than the dome-shaped ones. 100 of 130 crater-shaped edifices are probably not impact craters, although can be erroneously taken as eroded remnants of earlier craters of this type. Regarding their origin, different types of formation processes are evaluated.<i> </i>There is not a unique definite origin as they could be explained by various causes, such as impact craters, mud domes, pingos and volcanic activity, although the main cause seems to be either hydrothermal or volcanic nature. The formation mechanism and their potential role on volcanic activity can cast light on the geological evolution of this region and its ice and water-related history, which might be connected to the formation of gypsum and to the volcanic deposits found inside craters. <br>
DOI: 10.6084/m9.figshare.9944015
title: Oiricolor_annotation.txt

description: Trinonate annotation table for O. iricolor s.l. transcriptome.
DOI: 10.6084/m9.figshare.9944018
title: Osphegdoes_annotation

description: Trinotate annotation of <i>Ophrys sphegodes s.l.</i> transcriptome assembly.
DOI: 10.6084/m9.figshare.9944006
title: Gymnadenia_annotation.txt

description: Trinotate annotation from <i>Gymnadenia's </i>cross-species (<i>G. densiflora, G. odoratissima, G. conopsea, G. rhellicani</i>) transcriptome.
DOI: 10.6084/m9.figshare.9944018.v1
title: Osphegdoes_annotation

description: Trinotate annotation of <i>Ophrys sphegodes s.l.</i> transcriptome assembly.
DOI: 10.6084/m9.figshare.9944015.v1
title: Oiricolor_annotation.txt

description: Trinonate annotation table for O. iricolor s.l. transcriptome.
DOI: 10.6084/m9.figshare.9944006.v1
title: Gymnadenia_annotation.txt

description: Trinotate annotation from <i>Gymnadenia's </i>cross-species (<i>G. densiflora, G. odoratissima, G. conopsea, G. rhellicani</i>) transcriptome.
DOI: 10.6084/m9.figshare.9943856
title: Restricted Recombination Maps

description: Time-restricted recombination maps of hominin individuals obtained using iSMC.
DOI: 10.6084/m9.figshare.9943859
title: Strategic elements in the Fort Cooper Coal Measures: potential rare earth elements and other multi-product targets

description: Mineral matter in coals has been found to host valuable elements including germanium, lithium and rare-earth elements (REE), but such content of Australian coals remains under-explored. The aim of this paper is to provide a proof-of-concept study that determines elemental concentrations in the mineral matter of the high-ash, Fort Cooper Coal Measures (FCCM), Bowen Basin, Queensland. Coal in the FCCM has good coking properties but has not been extensively explored owing to its high ash content. This study performs a preliminary assessment of the elements from the coal portion that would typically become waste after washing or combustion. Given that the needs for industrial extraction methods will change over time, cataloguing and documenting the elemental composition of coal may assist future development of multiple products for the benefit of both the coal and mineral industries. This preliminary study has revealed similar elevations of REE and higher-than-average crustal concentrations of lithium, bismuth and scandium in some of the samples. Further analyses will be required on a larger dataset to better understand elemental associations and explore spatial patterns of elemental content that may indicate localised enrichments. Understanding the potential of valuable elements in the FCCM may stimulate interest in multiple-product-coal (or elemental-coal) mining in this under-exploited resource and further encourage the reduction of waste from other Australian coals at the wash-plant stage.
DOI: 10.6084/m9.figshare.9943850
title: Strain Genotype Data

description: NARSA <i>S. aureus</i> metadata including<i> spa </i>type, <i>mecA</i> type, and ST/CC.<br>
DOI: 10.6084/m9.figshare.9943859.v1
title: Strategic elements in the Fort Cooper Coal Measures: potential rare earth elements and other multi-product targets

description: Mineral matter in coals has been found to host valuable elements including germanium, lithium and rare-earth elements (REE), but such content of Australian coals remains under-explored. The aim of this paper is to provide a proof-of-concept study that determines elemental concentrations in the mineral matter of the high-ash, Fort Cooper Coal Measures (FCCM), Bowen Basin, Queensland. Coal in the FCCM has good coking properties but has not been extensively explored owing to its high ash content. This study performs a preliminary assessment of the elements from the coal portion that would typically become waste after washing or combustion. Given that the needs for industrial extraction methods will change over time, cataloguing and documenting the elemental composition of coal may assist future development of multiple products for the benefit of both the coal and mineral industries. This preliminary study has revealed similar elevations of REE and higher-than-average crustal concentrations of lithium, bismuth and scandium in some of the samples. Further analyses will be required on a larger dataset to better understand elemental associations and explore spatial patterns of elemental content that may indicate localised enrichments. Understanding the potential of valuable elements in the FCCM may stimulate interest in multiple-product-coal (or elemental-coal) mining in this under-exploited resource and further encourage the reduction of waste from other Australian coals at the wash-plant stage.
DOI: 10.6084/m9.figshare.9943775
title: Additional file 1: of Evaluating the potential impact of targeted vaccination strategies against severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV) outbreaks in the healthcare setting

description: The R code for the simulation algorithm for generating multiple stochastic realizations to assess the effect of vaccination strategies using Monte Carlo simulation methods is included as supplementary material. (R 7 kb)
DOI: 10.6084/m9.figshare.9943850.v1
title: Strain Genotype Data

description: NARSA <i>S. aureus</i> metadata including<i> spa </i>type, <i>mecA</i> type, and ST/CC.<br>
DOI: 10.6084/m9.figshare.9943751
title: ocurrences_data_Andigena_laminirostris_Ecuador

description: Georeferenced occurrences data of Andigena laminirostris in Ecuador.
DOI: 10.6084/m9.figshare.9943775.v1
title: Additional file 1: of Evaluating the potential impact of targeted vaccination strategies against severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV) outbreaks in the healthcare setting

description: The R code for the simulation algorithm for generating multiple stochastic realizations to assess the effect of vaccination strategies using Monte Carlo simulation methods is included as supplementary material. (R 7 kb)
DOI: 10.6084/m9.figshare.9943751.v1
title: ocurrences_data_Andigena_laminirostris_Ecuador

description: Georeferenced occurrences data of Andigena laminirostris in Ecuador.
DOI: 10.6084/m9.figshare.9943736
title: Genome assembly stats

description: Genome statistics for <i>S. aureus</i> assemblies.<br>
DOI: 10.6084/m9.figshare.9943742
title: Strain Metadata

description: Metadata including CC, agr type, MSSA/MRSA as well as GWAS results. These data were used for extreme gradient boosting, phylogenetic regression, and ancestral reconstruction<br>
DOI: 10.6084/m9.figshare.9943751.v3
title: ocurrences_data_Andigena_laminirostris_Ecuador

description: Georeferenced occurrences data of Andigena laminirostris in Ecuador.
DOI: 10.6084/m9.figshare.9943751.v2
title: ocurrences_data_Andigena_laminirostris_Ecuador

description: Georeferenced occurrences data of Andigena laminirostris in Ecuador.
DOI: 10.6084/m9.figshare.9943718
title: Mutant HPLC and SBA hemolysis

description: Transposon mutants and complemented strains of USA300 <i>S. aureus</i> were assessed for delta-toxin production via HPLC and sheep's blood agar hemolysis.<br>
DOI: 10.6084/m9.figshare.9943697
title: Teste

description: Figure 1
DOI: 10.6084/m9.figshare.9943712
title: occurrence_data_Andigena_Colombia.xlsx

description: Georeferenced occurrences data of Andigena hypoglauca, Andigena nigrirostris and Andigena laminirostris in Colombia
DOI: 10.6084/m9.figshare.9943718.v1
title: Mutant HPLC and SBA hemolysis

description: Transposon mutants and complemented strains of USA300 <i>S. aureus</i> were assessed for delta-toxin production via HPLC and sheep's blood agar hemolysis.<br>