cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15139/s3/hofscs
title: NIH/NIAID Clinical Trials Networks

description: The Office of HIV/AIDS Network Coordination (HANC) works with NIAID and the HIV/AIDS Clinical Trials Networks to facilitate collaboration and coordination on priority areas of research and operations, increase communication, and streamline processes to improve research efficiency. In addition to coordinating the efforts of the leadership principal investigators, inter-network coordination encompasses, among other areas, statistical and data management, laboratory, training, evaluation, clinical trials logistics, and community participation and education.
DOI: 10.15139/s3/ytizys
title: AIDS Clinical Trials Group (ACTG)

description: The ACTG conducts groundbreaking research to improve the treatment of HIV and its co-infections, including tuberculosis and viral hepatitis, as well as its co-morbidities. The ACTG also seeks to advance approaches to ultimately cure HIV. ACTG clinical trial units in 12 countries serve as major resources for HIV/AIDS research and training/education in their communities.
DOI: 10.15139/s3/heijjg
title: International Maternal Pediatric Adolescent AIDS Clinical Trials (IMPAACT)

description: The International Maternal Pediatric Adolescent AIDS Clinical Trials (IMPAACT) Network is a global collaboration of investigators, institutions, community representatives and other partners organized for the purpose of evaluating interventions to treat and prevent HIV infection and its consequences in infants, children, adolescents, and pregnant/postpartum women through the conduct of high quality clinical trials.
DOI: 10.15139/s3/f2ba0s
title: HIV Prevention Trials Network (HPTN)

description: The HIV Prevention Trials Network develops and tests the safety and efficacy of primarily non-vaccine interventions designed to prevent the transmission of HIV.
DOI: 10.15139/s3/0sulzy
title: North American AIDS Cohort Collaboration on Research and Design

description: NA-ACCORD has established a multi-disciplinary group of collaborators that span disciplines such as basic science, clinical research, epidemiology, data informatics and biostatistics. Collectively, our group is poised to answer the key questions in practice today. The NA-ACCORD has established a unique scientific platform to address clinical issues that are now of paramount importance in the modern treatment era.
DOI: 10.15139/s3/rab8h8
title: Women's Interagency HIV Study (WIHS)

description: WIHS is a large, comprehensive prospective cohort study designed to investigate the progression of HIV disease in women. The WIHS began in 1993 in response to growing concern about the impact of HIV on women. The core study visit includes a detailed and structured interview, physical and gynecologic examinations, and laboratory testing.
DOI: 10.5281/zenodo.8271651
title: CARDIOMYOCYTE RYANODINE RECEPTOR CLUSTERS EXPAND AND COALESCE AFTER APPLICATION OF ISOPROTERENOL

description: This is data that was used to generate the figures and tables for the Journal of General Physiology paper<br> CARDIOMYOCYTE RYANODINE RECEPTOR CLUSTERS EXPAND AND COALESCE AFTER APPLICATION OF ISOPROTERENOL The data is in two parts: i) Blink data that records the positions of blinks collected from fluorescently labelled ryanodine receptors on the surface of rat ventricular myocytes. ii) Cluster data that records parameters from each of the clusters created by the blink data. The blink data was used to generate Figs. 1 to 4, S3 to S5, while cluster data was used to generate the tables<br> and Figs. 5 to 9. More detailed explanations of the data are in the files blinkinfo.html and clustinfo.html in their respective<br> directories.
DOI: 10.5281/zenodo.8271650
title: CARDIOMYOCYTE RYANODINE RECEPTOR CLUSTERS EXPAND AND COALESCE AFTER APPLICATION OF ISOPROTERENOL

description: This is data that was used to generate the figures and tables for the Journal of General Physiology paper<br> CARDIOMYOCYTE RYANODINE RECEPTOR CLUSTERS EXPAND AND COALESCE AFTER APPLICATION OF ISOPROTERENOL The data is in two parts: i) Blink data that records the positions of blinks collected from fluorescently labelled ryanodine receptors on the surface of rat ventricular myocytes. ii) Cluster data that records parameters from each of the clusters created by the blink data. The blink data was used to generate Figs. 1 to 4, S3 to S5, while cluster data was used to generate the tables<br> and Figs. 5 to 9. More detailed explanations of the data are in the files blinkinfo.html and clustinfo.html in their respective<br> directories.
DOI: 10.26300/2fby-nz61
title: Data information for elevated amyloid-β PET scan and cognitive and functional decline in mild cognitive impairment and dementia of uncertain etiology
DOI: 10.25345/c51g0j52g
title: MassIVE MSV000092754 - 05092023-pos-philic-data-backup
title: Human serum samples from Johns Hopkins University. LCMS run on 05-09-2023. Polar HILIC column. This project is about the chagas disease progression. Four groups in this dataset: infected-progressed, infected-non-progressed, uninfected-progressed, uninfected-non-progressed. We want to compare the progressed and non-progressed in infected groups to see the changes of metabolites related to the disease progression.
DOI: 10.6084/m9.figshare.24033960
title: Supplementary Tables 1-4

description: List of significantly altered genes in aHepGHRkd compared to Null data from GEO (GSE154217)Suppl Table 1: Significantly upregulated in malesSuppl Table 2: Significantly downregulated in malesSuppl Table 3: Significantly upregulated in femalesSuppl Table 4: Significantly downregulated in females-<br><br>
DOI: 10.6084/m9.figshare.24033960.v1
title: Supplementary Tables 1-4

description: List of significantly altered genes in aHepGHRkd compared to Null data from GEO (GSE154217)Suppl Table 1: Significantly upregulated in malesSuppl Table 2: Significantly downregulated in malesSuppl Table 3: Significantly upregulated in femalesSuppl Table 4: Significantly downregulated in females-<br><br>
DOI: 10.48511/t4gy-9g27
title: Bruce Climate Station

description: This dataset contains climate data for Bruce Climate Station. This site is part of the Living Lakes Canada Columbia Basin Water Monitoring Framework program. Bruce Creek was selected for monitoring to represent a broad range of climatic conditions at mid elevation. This climate station is paired with the Bruce Creek hydrometric station. The data is being collected to track the impacts of climate change on Columbia Basin water supply and support community climate adaptation. Monitoring has been implemented on this site. Data will be added soon.

Funding provided by the Province of BC, Healthy Watersheds Initiative partners (Stronger BC, Real Estate Foundation of BC, Watersheds BC), Province of BC, Columbia Basin Trust, Canada’s Digital Technology Supercluster partners (Carl Data Solutions, Teck Resources Ltd., Microsoft, Astra Smart Systems, i4C Innovation, the University of Victoria and Genome BC), MakeWay, RBC Tech for Nature, Regional District of Central Kootenay, Sitka Foundation, and the Vancouver Foundation.
DOI: 10.5281/zenodo.8284219
title: Dataset for the paper: Linking the Dynamic PicoProbe Analytical Electron-Optical Beam Line / Microscope to Supercomputers

description: <strong>Dataset</strong> This dataset contains the input and output examples used in the publication described below. The hyperspectral folder contains the first example and use case. The spatiotemporal folder contains the second example use case. <strong>Contents</strong> data/<br> ├── hyperspectral<br> │ ├── VeloxTest-Membranes.emd<br> │ └── example_output<br> │ ├── simulator-0-VeloxTest-Membranes.emd<br> │ ├── simulator-0-VeloxTest-Membranes.json<br> │ └── simulator-0-VeloxTest-Membranes.png<br> └── spatiotemporal<br> ├── 2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.emd<br> ├── best-yolo.pt<br> └── example_output<br> ├── prediction-simulator-17-2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.mp4<br> ├── simulator-17-2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.emd<br> ├── simulator-17-2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.json<br> └── simulator-17-2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.mp4<br> <strong>Source Code</strong><br> Our code is hosted on GitHub at the following link: https://github.com/ramanathanlab/PicoProbeDataFlow/tree/main<br> <br> <strong>Paper Name</strong><br> Linking the Dynamic PicoProbe Analytical Electron-Optical Beam Line / Microscope to Supercomputers<br> <br> <strong>Paper Abstract</strong><br> The Dynamic PicoProbe at Argonne National Laboratory is undergoing upgrades that will enable it to produce up to 100s of GB of data per day. While this data is highly important for both fundamental science and industrial applications, there is currently limited on-site infrastructure to handle these high-volume data streams. We address this problem by providing a software architecture capable of supporting large-scale data transfers to the neighboring supercomputers at the Argonne Leadership Computing Facility. To prepare for future scientific workflows, we implement two instructive use cases for hyperspectral and spatiotemporal datasets, which include: (i) off-site data transfer, (ii) machine learning/artificial intelligence and traditional data analysis approaches, and (iii) automatic metadata extraction and cataloging of experimental results. This infrastructure supports expected workloads and also provides domain scientists the ability to reinterrogate data from past experiments to yield additional scientific value and derive new insights.
DOI: 10.5281/zenodo.8284218
title: Dataset for the paper: Linking the Dynamic PicoProbe Analytical Electron-Optical Beam Line / Microscope to Supercomputers

description: <strong>Dataset</strong> This dataset contains the input and output examples used in the publication described below. The hyperspectral folder contains the first example and use case. The spatiotemporal folder contains the second example use case. <strong>Contents</strong> data/<br> ├── hyperspectral<br> │ ├── VeloxTest-Membranes.emd<br> │ └── example_output<br> │ ├── simulator-0-VeloxTest-Membranes.emd<br> │ ├── simulator-0-VeloxTest-Membranes.json<br> │ └── simulator-0-VeloxTest-Membranes.png<br> └── spatiotemporal<br> ├── 2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.emd<br> ├── best-yolo.pt<br> └── example_output<br> ├── prediction-simulator-17-2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.mp4<br> ├── simulator-17-2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.emd<br> ├── simulator-17-2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.json<br> └── simulator-17-2023081040-700kx MultiFrams 991ms 600F Counting & FFI mode Falcon 700 kx 1819.mp4<br> <strong>Source Code</strong><br> Our code is hosted on GitHub at the following link: https://github.com/ramanathanlab/PicoProbeDataFlow/tree/main<br> <br> <strong>Paper Name</strong><br> Linking the Dynamic PicoProbe Analytical Electron-Optical Beam Line / Microscope to Supercomputers<br> <br> <strong>Paper Abstract</strong><br> The Dynamic PicoProbe at Argonne National Laboratory is undergoing upgrades that will enable it to produce up to 100s of GB of data per day. While this data is highly important for both fundamental science and industrial applications, there is currently limited on-site infrastructure to handle these high-volume data streams. We address this problem by providing a software architecture capable of supporting large-scale data transfers to the neighboring supercomputers at the Argonne Leadership Computing Facility. To prepare for future scientific workflows, we implement two instructive use cases for hyperspectral and spatiotemporal datasets, which include: (i) off-site data transfer, (ii) machine learning/artificial intelligence and traditional data analysis approaches, and (iii) automatic metadata extraction and cataloging of experimental results. This infrastructure supports expected workloads and also provides domain scientists the ability to reinterrogate data from past experiments to yield additional scientific value and derive new insights.
DOI: 10.4121/b4d97366-a512-4a93-9fe5-3cbda29fa9de.v1
title: Supporting data for the article “Monitoring and Forecasting Injection Induced Fault Reactivation and Seismicity in the Laboratory using Active Acoustic Methods”

description: Support data consists of all waveforms recorded, loading data of each fault reactivation experiment.
DOI: 10.48511/des7-3a16
title: Kokanee Glacier Weather Station

description: Weather station at Kokanee Glacier Cabin in association with the Alpine Club of Canada.
DOI: 10.26208/n95w-7r96
title: Idealized tornado simulations for Wang et al. (2020) turbulence memory study.

description: This dataset contains the numerical simulations used in the Wang et al. (2020) study of turbulence memory in idealized tornadoes. Surface friction contributes to tornado formation and maintenance by enhancing the convergence of angular momentum. The traditional lower boundary condition in atmospheric models typically assumes an instant equilibrium between the unresolved stress and the resolved shear. This assumption ignores the physics that turbulent motions are generated and dissipated at finite rates—in effect, turbulence has a memory through its lifetime. In this work, a modified lower boundary condition is proposed to account for the effect of turbulence memory. Specifically, when an air parcel moves along a curved trajectory, a normal surface-shear-stress component arises owing to turbulence memory. In the accompanying large-eddy simulation (LES) of idealized tornadoes, the normal surface-shear-stress component is a source of additional dynamic instability, which provides an extra pathway for the development of turbulent motions. The influence of turbulence memory on the intensity of quasi-steady-state tornadoes remains negligible as long as assumptions employed by the modified lower boundary condition hold over a relatively large fraction of the flow region of interest. However, tornadoes in a transient state may be especially sensitive to turbulence memory. See Wang et al. (2021) for additional details.
DOI: 10.48511/9vmc-mn20
title: Talus Lodge Weather Station

description: Weather Station located at Talus Backcountry Lodge and snow data.
DOI: 10.48511/z8f9-0559
title: Valhalla Mountain Touring Weather Station

description: Weather station operated by Valhalla Mountain Touring and Avalanche Canada.
DOI: 10.4121/21557910.v1
title: Supporting data for the article “Forecasting of Rock Failure in the Laboratory using Active Acoustic Monitoring Methods”

description: Data from the article 'Forecasting of Rock Failure in the Laboratory using Active Acoustic Monitoring Methods'. Waveforms and loading data recorded during rock failure experiments in the TU Delft laboratory.
DOI: 10.6075/j03n21bk
title: Teaching Bee

description: This collection of documents provides teaching exercises and information for instructors of students ranging from junior high school through college. The target audience is indicated for each collection item.
DOI: 10.48511/4mcy-2v30
title: Rosen Lake Field Water Quality

description: The East Kootenay Invasive Species Council (EKISC) conducts invasive mussel monitoring on various waterbodies across the region. A water sample is taken at each lake using a plankton tow net to test for invasive Zebra and Quagga mussel larva. Ancillary data including temperature, pH, and Secchi depth are taken at each water body and are shared in this dataset. Higher priority lakes (i.e., lakes that receive more transient use) are sampled twice per month, while lower priority lakes are sampled once per month from the beginning of June until the end of September.

This program is funded by a grant program administered by the Habitat Conservation Trust Foundation (HCTF) in partnership with B.C’s Ministry of Environment and Climate Change Strategy.
DOI: 10.48511/y0m8-yy02
title: Bull River Field Water Quality

description: The East Kootenay Invasive Species Council (EKISC) conducts invasive mussel monitoring on various waterbodies across the region. A water sample is taken at each lake using a plankton tow net to test for invasive Zebra and Quagga mussel larva. Ancillary data including temperature, pH, and Secchi depth are taken at each water body and are shared in this dataset. Higher priority lakes (i.e., lakes that receive more transient use) are sampled twice per month, while lower priority lakes are sampled once per month from the beginning of June until the end of September.

This program is funded by a grant program administered by the Habitat Conservation Trust Foundation (HCTF) in partnership with B.C’s Ministry of Environment and Climate Change Strategy.
DOI: 10.48511/mw3s-0t16
title: Elk River Field Water Quality

description: The East Kootenay Invasive Species Council (EKISC) conducts invasive mussel monitoring on various waterbodies across the region. A water sample is taken at each lake using a plankton tow net to test for invasive Zebra and Quagga mussel larva. Ancillary data including temperature, pH, and Secchi depth are taken at each water body and are shared in this dataset. Higher priority lakes (i.e., lakes that receive more transient use) are sampled twice per month, while lower priority lakes are sampled once per month from the beginning of June until the end of September.

This program is funded by a grant program administered by the Habitat Conservation Trust Foundation (HCTF) in partnership with B.C’s Ministry of Environment and Climate Change Strategy.
DOI: 10.48511/y285-qf36
title: Norbury Lake Field Water Quality

description: The East Kootenay Invasive Species Council (EKISC) conducts invasive mussel monitoring on various waterbodies across the region. A water sample is taken at each lake using a plankton tow net to test for invasive Zebra and Quagga mussel larva. Ancillary data including temperature, pH, and Secchi depth are taken at each water body and are shared in this dataset. Higher priority lakes (i.e., lakes that receive more transient use) are sampled twice per month, while lower priority lakes are sampled once per month from the beginning of June until the end of September.

This program is funded by a grant program administered by the Habitat Conservation Trust Foundation (HCTF) in partnership with B.C’s Ministry of Environment and Climate Change Strategy.
DOI: 10.48511/adh9-ac37
title: Monroe Lake Field Water Quality

description: The East Kootenay Invasive Species Council (EKISC) conducts invasive mussel monitoring on various waterbodies across the region. A water sample is taken at each lake using a plankton tow net to test for invasive Zebra and Quagga mussel larva. Ancillary data including temperature, pH, and Secchi depth are taken at each water body and are shared in this dataset. Higher priority lakes (i.e., lakes that receive more transient use) are sampled twice per month, while lower priority lakes are sampled once per month from the beginning of June until the end of September.

This program is funded by a grant program administered by the Habitat Conservation Trust Foundation (HCTF) in partnership with B.C’s Ministry of Environment and Climate Change Strategy.
DOI: 10.48511/dkev-gc76
title: Jim Smith Lake Field Water Quality

description: The East Kootenay Invasive Species Council (EKISC) conducts invasive mussel monitoring on various waterbodies across the region. A water sample is taken at each lake using a plankton tow net to test for invasive Zebra and Quagga mussel larva. Ancillary data including temperature, pH, and Secchi depth are taken at each water body and are shared in this dataset. Higher priority lakes (i.e., lakes that receive more transient use) are sampled twice per month, while lower priority lakes are sampled once per month from the beginning of June until the end of September.

This program is funded by a grant program administered by the Habitat Conservation Trust Foundation (HCTF) in partnership with B.C’s Ministry of Environment and Climate Change Strategy.
DOI: 10.5517/ccdc.csd.cc286g10
title: CCDC 2091571: Experimental Crystal Structure Determination

description: Related Article: Luis A. Ortiz-Rodríguez, Ye-Guang Fang, Germain Niogret, Kaivin Hadidi, Sean J. Hoehn, Heather J. Folkwein, Steffen Jockusch, Yitzhak Tor, Ganglong Cui, Liraz Levi, Carlos E. Crespo-Hernández|2023|Chemical Science|14|8831|doi:10.1039/D3SC02592F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cpwlk
title: CCDC 2195779: Experimental Crystal Structure Determination

description: Related Article: Yuting Qing, Ziyun Tan, Hejinglong Zhang, Yanwei Wang, Yize Shi, Dan Yuan, Wenyi Li, Yingming Yao|2023|Organometallics|42|2102|doi:10.1021/acs.organomet.3c00255
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cpwml
title: CCDC 2195780: Experimental Crystal Structure Determination

description: Related Article: Yuting Qing, Ziyun Tan, Hejinglong Zhang, Yanwei Wang, Yize Shi, Dan Yuan, Wenyi Li, Yingming Yao|2023|Organometallics|42|2102|doi:10.1021/acs.organomet.3c00255
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cpwnm
title: CCDC 2195781: Experimental Crystal Structure Determination

description: Related Article: Yuting Qing, Ziyun Tan, Hejinglong Zhang, Yanwei Wang, Yize Shi, Dan Yuan, Wenyi Li, Yingming Yao|2023|Organometallics|42|2102|doi:10.1021/acs.organomet.3c00255
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dpcdw
title: CCDC 2225068: Experimental Crystal Structure Determination

description: Related Article: Arpine Vardanyan, Alexander Villinger, Peter Ehlers, Peter Langer|2023|J.Org.Chem.|88|11411|doi:10.1021/acs.joc.2c02997
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.