cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.hmzsub
title: Occurrence Download

description: A dataset containing 2284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Amolops mantzorum (David, 1872)"
 ]
}

 The dataset includes 2284 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004962-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8deuyt
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Nephelium chryseum Blume"
 ]
}

 The dataset includes 36 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004963-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwhpfc
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19.1_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Artemisia desertorum Spreng."
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004964-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28682711
title: Supplementary Material for: A CASE REPORT OF SUCCESSFUL CATARACT SURGERY IN THEIL-BEHNKE CORNEAL DYSTROPHY: A VISUAL REHABILITATION FOR THE PATIENT

description: Introduction
Thiel-Behnke corneal dystrophy is a rare inherited condition characterized by symmetrical subepithelial corneal opacities that gradually reduce vision. It is an autosomal dominant inherited epithelial stromal TGFB1 dystrophy that mainly causes visual impairment. 
Case Presentation
This case report describes case of a woman in her early 50s with progressive vision loss in her left eye over the past three months with a history of recurrent corneal erosions in childhood. Examination on a slit lamp showed corneal dystrophy affecting both eyes, matching the features of Thiel-Behnke dystrophy. Diagnosis was confirmed with Anterior Segment - Optical Coherence Tomography (AS-OCT), revealing a distinctive sawtooth pattern in Bowman's layer. The patient was managed conservatively for her dystrophy and was also surgically treated for her cataract in the left eye which showed a significant improvement in her vision.
Conclusion
 Despite its rarity, Thiel-Behnke dystrophy along with cataract can severely impair vision, making early diagnosis and continuous monitoring crucial for preventing further visual decline.
DOI: 10.6084/m9.figshare.28682711.v1
title: Supplementary Material for: A CASE REPORT OF SUCCESSFUL CATARACT SURGERY IN THEIL-BEHNKE CORNEAL DYSTROPHY: A VISUAL REHABILITATION FOR THE PATIENT

description: Introduction
Thiel-Behnke corneal dystrophy is a rare inherited condition characterized by symmetrical subepithelial corneal opacities that gradually reduce vision. It is an autosomal dominant inherited epithelial stromal TGFB1 dystrophy that mainly causes visual impairment. 
Case Presentation
This case report describes case of a woman in her early 50s with progressive vision loss in her left eye over the past three months with a history of recurrent corneal erosions in childhood. Examination on a slit lamp showed corneal dystrophy affecting both eyes, matching the features of Thiel-Behnke dystrophy. Diagnosis was confirmed with Anterior Segment - Optical Coherence Tomography (AS-OCT), revealing a distinctive sawtooth pattern in Bowman's layer. The patient was managed conservatively for her dystrophy and was also surgically treated for her cataract in the left eye which showed a significant improvement in her vision.
Conclusion
 Despite its rarity, Thiel-Behnke dystrophy along with cataract can severely impair vision, making early diagnosis and continuous monitoring crucial for preventing further visual decline.
DOI: 10.6084/m9.figshare.28682714
title: Supplementary Material for: D-bifunctional protein deficiency type III: Two Turkish cases and a novel HSD17B4 gene variant

description: Introduction: Bi-allelic variants in the 17-hydroxysteroid dehydrogenase type 4 gene (HSD17B4) cause the extremely rare autosomal recessive disorder known as peroxisomal D-bifunctional protein deficiency (D-BPD) (#OMIM 261515). This protein mediates hydration and dehydrogenation in the peroxisomal fatty acid β-oxidation pathway. Because of this, very long chain fatty acids (VLCFAs), branched fatty acids (pristanic acid), and bile acid components can't be broken down without it. Clinically, it causes developmental delay with neonatal hypotonia, seizures, and dysmorphic features. The D-BPD is divided into four subtypes according to the region affected by the variant causing the disorder. 
Case Presentation: Two newborns presented with severe hypotonia, intractable seizures, and dysmorphic facial features (microretrognathia, hypertelorism). These cases showed high levels of VLCFAs and were diagnosed by next-generation gene sequencing tests. We found a known homozygous variant (c.46G&gt;A/p.Gly16Ser) in the HSD17B4 gene of case 1, which had been linked to D-BPD type III before. Case 1 developed adrenal insufficiency during follow-up. In Case 2, we discovered a novel homozygous variant (c. 559A&gt;T, p. Ile187Phe) in the HSD17B4 gene in exon 8 that led to the development of D-BPD type III. The American College of Medical Genetics and Genomics (ACMG) classifies this missense variant as likely pathogenic.
Discussion: The D-BPD type III cases profiled in this report exhibit a severe phenotype, which includes dysmorphic facial features, severe hypotonia, and refractory seizures that manifest from birth. One month after the VLCFAs analysis revealed something suggestive of a peroxisomal disorder, a targeted gene panel analysis could confirm the diagnosis.
DOI: 10.6084/m9.figshare.28682714.v1
title: Supplementary Material for: D-bifunctional protein deficiency type III: Two Turkish cases and a novel HSD17B4 gene variant

description: Introduction: Bi-allelic variants in the 17-hydroxysteroid dehydrogenase type 4 gene (HSD17B4) cause the extremely rare autosomal recessive disorder known as peroxisomal D-bifunctional protein deficiency (D-BPD) (#OMIM 261515). This protein mediates hydration and dehydrogenation in the peroxisomal fatty acid β-oxidation pathway. Because of this, very long chain fatty acids (VLCFAs), branched fatty acids (pristanic acid), and bile acid components can't be broken down without it. Clinically, it causes developmental delay with neonatal hypotonia, seizures, and dysmorphic features. The D-BPD is divided into four subtypes according to the region affected by the variant causing the disorder. 
Case Presentation: Two newborns presented with severe hypotonia, intractable seizures, and dysmorphic facial features (microretrognathia, hypertelorism). These cases showed high levels of VLCFAs and were diagnosed by next-generation gene sequencing tests. We found a known homozygous variant (c.46G&gt;A/p.Gly16Ser) in the HSD17B4 gene of case 1, which had been linked to D-BPD type III before. Case 1 developed adrenal insufficiency during follow-up. In Case 2, we discovered a novel homozygous variant (c. 559A&gt;T, p. Ile187Phe) in the HSD17B4 gene in exon 8 that led to the development of D-BPD type III. The American College of Medical Genetics and Genomics (ACMG) classifies this missense variant as likely pathogenic.
Discussion: The D-BPD type III cases profiled in this report exhibit a severe phenotype, which includes dysmorphic facial features, severe hypotonia, and refractory seizures that manifest from birth. One month after the VLCFAs analysis revealed something suggestive of a peroxisomal disorder, a targeted gene panel analysis could confirm the diagnosis.
DOI: 10.6084/m9.figshare.28682717
title: Supplementary Material for: Clinical characteristics and outcomes of elderly COVID-19 patients admitted to ICU during Chinese Mainland’s Omicron Wave: A multicenter retrospective cohort study

description: Introduction: There is limited information on elderly patients with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron variant infections. We aimed to describe the characteristics and outcomes of elderly patients with Omicron variant infections admitted to the intensive care unit (ICU) on the Chinese Mainland and to evaluate the risk factors associated with mortality in these patients. 
Methods: We conducted a multicenter retrospective study including elderly patients with SARS-CoV-2 infection who were admitted to the ICU from November 1, 2022, to February 11, 2023, on the Chinese Mainland. The primary objective of the study was to describe the characteristics and outcomes of elderly ICU patients with Omicron variant infections. The secondary objective was to evaluate the risk factors for mortality of these patients.
Results: We included 1605 patients aged 65 years or older diagnosed with severe or critical COVID-19 and admitted to ICUs in 59 hospitals across different areas of the Chinese Mainland. The median age was 78 years (P25–P75, 72–84), with male patients accounting for 1164/1605 (72.5%), and 1459/1605 (90.9%) of patients having at least one comorbidity. The median APACHE II scores and SOFA scores were 16 (P25–P75, 11–23) and 5 (P25–P75, 3–8), respectively. Among these patients, 553 (34.5%) were recovery discharged, 557 (34.7%) died in the ICUs, and 495 (30.8%) discharged voluntarily during therapy and were later confirmed dead after discharge. Multivariable logistics analysis indicated that older age, coinfection, high levels of white blood cell count, blood urea nitrogen, D-Dimer, and lactate at admission were against for recovery discharged.
Conclusions: Elderly patients infected with the Omicron variant of SARS-CoV-2 and admitted to the ICU had a considerable mortality rate. Better understanding of risk factors for mortality may improve clinical management and more rational allocation of limited medical resources during a COVID-19 surge.
DOI: 10.6084/m9.figshare.28682720
title: Supplementary Material for: A novel homozygous missense SCUBE3 variant with protein modeling in a patient diagnosed as Short Stature, Facial Dysmorphism, and Skeletal Anomalies with or without Cardiac Anomalies 2

description: Introduction: Short Stature, Facial Dysmorphism, and Skeletal Anomalies with or without Cardiac Anomalies 2 is a very rare genetic disorder caused by biallelic pathogenic variants in the SCUBE3 gene and has been reported in approximately 20 patients to date. SCUBE3 protein exhibits significant expression in various tissues, including primary osteoblasts, long bones, and the cartilage of the axial skeleton throughout development, while also playing a regulatory role in the FGF, Hedgehog, and TGF-β signaling pathways. Case Presentation: We report a 13-year-old female patient from a consanguineous Turkish family with a novel homozygous missense variant, c.908G&gt;C; (p.Cys303Ser) in the SCUBE3 gene identified, through exome sequencing. The patient exhibited prenatal growth retardation, short stature, microcephaly, distinctive facial traits, such as long face, high arched eyebrows, epicanthus, blepharoptosis, hypotelorism, high nasal bridge, micrognathia, and large ears, dental anomalies, and skeletal abnormalities, including scoliosis, eleven pairs of ribs, mild radial bowing, irregular endplates in the lower thoracic vertabrae, and narrow iliac wings. Conclusion: Protein modeling using AlphaFold3 revealed disruption of a critical disulfide bridge within the seventh epidermal growth factor-like repeat, likely affecting protein stability. In this study, we aimed to further characterize the clinical, radiological, and molecular features of this disorder with protein modeling.
DOI: 10.6084/m9.figshare.28682720.v1
title: Supplementary Material for: A novel homozygous missense SCUBE3 variant with protein modeling in a patient diagnosed as Short Stature, Facial Dysmorphism, and Skeletal Anomalies with or without Cardiac Anomalies 2

description: Introduction: Short Stature, Facial Dysmorphism, and Skeletal Anomalies with or without Cardiac Anomalies 2 is a very rare genetic disorder caused by biallelic pathogenic variants in the SCUBE3 gene and has been reported in approximately 20 patients to date. SCUBE3 protein exhibits significant expression in various tissues, including primary osteoblasts, long bones, and the cartilage of the axial skeleton throughout development, while also playing a regulatory role in the FGF, Hedgehog, and TGF-β signaling pathways. Case Presentation: We report a 13-year-old female patient from a consanguineous Turkish family with a novel homozygous missense variant, c.908G&gt;C; (p.Cys303Ser) in the SCUBE3 gene identified, through exome sequencing. The patient exhibited prenatal growth retardation, short stature, microcephaly, distinctive facial traits, such as long face, high arched eyebrows, epicanthus, blepharoptosis, hypotelorism, high nasal bridge, micrognathia, and large ears, dental anomalies, and skeletal abnormalities, including scoliosis, eleven pairs of ribs, mild radial bowing, irregular endplates in the lower thoracic vertabrae, and narrow iliac wings. Conclusion: Protein modeling using AlphaFold3 revealed disruption of a critical disulfide bridge within the seventh epidermal growth factor-like repeat, likely affecting protein stability. In this study, we aimed to further characterize the clinical, radiological, and molecular features of this disorder with protein modeling.
DOI: 10.15468/dl.79ts2a
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19.1_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Haloxylon ammodendron (C.A.Mey.) Bunge ex Fenzl"
 ]
}

 The dataset includes 31 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004965-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyeasj
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19.1_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Kalidium gracile Fenzl"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004966-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a4ddqd
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19.1_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Corethrodendron scoparium (Fisch. & C.A.Mey.) Fisch. & Basiner"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004967-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7paxzb
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19.1_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Caragana stenophylla Pojark."
 ]
}

 The dataset includes 16 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004968-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bw4sz8
title: Occurrence Download

description: A dataset containing 551176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "MediaType is Image",
 "OccurrenceStatus is Present",
 "TaxonKey is Fagaceae"
 ]
}

 The dataset includes 551176 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004947-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gwg9pn
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19.1_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Kalidium foliatum (Pall.) Moq."
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004969-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e224262
title: Growth theory appendices

description: Collected appendices of published growth theories for replication purposes
DOI: 10.3886/e224262v1-172861
title: Growth theory appendices

description: Collected appendices of published growth theories for replication purposes
DOI: 10.6084/m9.figshare.28682723
title: depression

description: 1233 45 23 45
DOI: 10.6084/m9.figshare.28682723.v1
title: depression

description: 1233 45 23 45
DOI: 10.15151/esrf-es-2112563910
title: CHRONOS

description: Many fundamental processes evolve over months and years, including 1) the strengthening of fault zones in the interseismic period between earthquakes, 2) the sequestration of carbon-bearing minerals in subsurface geologic reservoirs, 3) charge cycling in batteries, 4) the reactions between mixing magmas preceding volcanic eruptions, and 5) the degradation of fossils. Characterizing these processes in experiments typically requires unnatural methods of increasing the rates of reactions, or periodically removing the material from the apparatus or host material. Organization of a group of experts focused on these processes into a BAG will provide significant advances in our understanding of these processes. The BAG will enable far longer experiments than achieved previously that reveal the 4D evolution in situ, without significant perturbation of the sample, and without unnatural acceleration of the rates of the processes.
DOI: 10.15151/esrf-es-2015886362
title: NORWAY BAG

description: The fourteen PIs associated to this proposal represent the entire crystallography community in Norway and are affiliated to the major Norwegian universities. The research interests of the PIs and their collaborators revolves around topics linked to structural biology and material sciences.

We apply for beam time for single- and multi-wavelength MX, Bio-SAXS and Cryo-EM, in support of our research projects funded e.g. by the Research Council of Norway and the ERC. Examples of research projects or topics are carbohydrate-active proteins of medical or bioeconomic relevance, inhibition of DNA repair enzymes, metalloprotein function and catalysis, regulation of cell-cycle processes, enzyme discovery, antibiotic resistance/drug-discovery and neurological diseases.

Our overarching aim is to use bright synchrotron sources to produce high quality science.
DOI: 10.15151/esrf-es-2066300024
title: Scientific projects of the IBS synchrotron group

description: We study the structures of a broad diversity of macromolecules from fluorescent to metabolic proteins. One of our primary focus is on solving the 3D structures of enzymes within the MEP pathway, as they represent promising drug targets. Additionally, we are engaged in characterizing new fluorescent proteins derived for instance from bacteriophytochrome. Our research activities also include the development of instrumentation and methodologies, spanning from crystallization to room temperature data collection. We strive to enhance crystal quality for both X-ray and neutron diffraction. Furthermore, we conduct high-throughput screening (HTS) of chemical libraries to identify active ligands targeting proteins with pharmaceutical relevance.
DOI: 10.15151/esrf-es-2112539071
title: Feasibility study for upcoming beamtime MA-6528

description: Feasibility study for upcoming beamtime MA-6528
DOI: 10.15151/esrf-es-2112608343
title: RIXS-MCD of e-Fe2O3 and AlFO3 thin films

description: This experiment will perform survey measurements on e-Fe2O3 and AlFO3 thin films. We want to characterize the Fe L3,2 edge spectra of these two materials to identify how they can be discriminated in feature experiments.
DOI: 10.5281/zenodo.15095140
title: Submarine channel network of upper Indus Fan, Arabian Sea

description: Geospatial data of identified channel-levee system of the upper Indus Fan, Arabian Sea from the high-resolution multibeam bathymetric data.
DOI: 10.5281/zenodo.15095141
title: Submarine channel network of upper Indus Fan, Arabian Sea

description: Geospatial data of identified channel-levee system of the upper Indus Fan, Arabian Sea from the high-resolution multibeam bathymetric data.
DOI: 10.15468/dl.8p8fc8
title: Occurrence Download

description: A dataset containing 268 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Octopus minor (Sasaki, 1920)"
 ]
}

 The dataset includes 268 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004971-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28225736
title: Miscible Chemical Ordering in Ti-Cr-Mo Ternary System by Solid Solution of Mo2Ti2AlC3 and Cr2.5Ti1.5AlC3 o-MAXs

description: XRD patterns, computational models, computational results of bonds, and the results of mechanical tests
DOI: 10.6084/m9.figshare.28225736.v1
title: Miscible Chemical Ordering in Ti-Cr-Mo Ternary System by Solid Solution of Mo2Ti2AlC3 and Cr2.5Ti1.5AlC3 o-MAXs

description: XRD patterns, computational models, computational results of bonds, and the results of mechanical tests
DOI: 10.6084/m9.figshare.27618465
title: Quantifying second messenger information transmission in bacteria.

description: Jin_SourceData_Fig1.xlsx provides raw data for the dose-response curve of the cAMP sensor and the temporal changes in fluorescence intensity under light and dark conditions.
Jin_SourceData_Fig2.xlsx contains the raw data of two key parameters (k and γ) extracted from individual bacterial cells across all experiments, along with the original measurements of cAMP signal intensity and signal-to-noise ratio as a function of reduced frequency. These experimental measurements serve as the foundation for the theoretical analysis and computational modeling presented in Figure 3.
Jin_SourceData_Fig4.xlsx contains raw data of intracellular cAMP dynamics in single bacterial cells under random light stimulation with various code durations, and the relationship between decoding accuracy and frequency presented in the main text.