cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14335015
title: Sample Graph Datasets in CSV Format

description: Sample Graph Datasets in CSV Format

Note: none of the data sets published here contain actual data, they are for testing purposes only. 

Description

This data repository contains graph datasets, where each graph is represented by two CSV files: one for node information and another for edge details. To link the files to the same graph, their names include a common identifier based on the number of nodes. For example:



dataset_30_nodes_interactions.csv:contains 30 rows (nodes).

dataset_30_edges_interactions.csv: contains 47 rows (edges).

the common identifier dataset_30 refers to the same graph.


CSV nodes

Each dataset contains the following columns:




Name of the Column
Type
Description


UniProt ID
string
protein identification


label
string
protein label (type of node)


properties
string
a dictionary containing properties related to the protein.




CSV edges

Each dataset contains the following columns:




Name of the Column
Type
Description


Relationship ID
string
relationship identification


Source ID
string
identification of the source protein in the relationship


Target ID
string
identification of the target protein in the relationship


label
string
relationship label (type of relationship)


properties
string
a dictionary containing properties related to the relationship.




Metadata




Graph
Number of Nodes
Number of Edges
Sparse graph




dataset_30*



30

47


Y





dataset_60*



60



181



Y





dataset_120*



120



689



Y





dataset_240*



240



2819



Y





dataset_300*



300



4658



Y





dataset_600*



600



18004



Y





dataset_1200*



1200



71785



Y





dataset_2400*



2400



288600



Y





dataset_3000*



3000



449727



Y





dataset_6000*



6000



1799413



Y





dataset_12000*



12000



7199863



Y





dataset_24000*



24000



28792361



Y





dataset_30000*



30000



44991744



Y





 

This repository include two (2) additional tiny graph datasets to experiment before dealing with larger datasets.

CSV nodes (tiny graphs)

Each dataset contains the following columns:




Name of the Column
Type
Description


ID
string
node identification


label
string
node label (type of node)


properties
string
a dictionary containing properties related to the node.




CSV edges (tiny graphs)

Each dataset contains the following columns:




Name of the Column
Type
Description


ID
string
relationship identification


source
string
identification of the source node in the relationship


target
string
identification of the target node in the relationship


label
string
relationship label (type of relationship)


properties
string
a dictionary containing properties related to the relationship.




Metadata (tiny graphs)




Graph
Number of Nodes
Number of Edges
Sparse graph


dataset_dummy*
3
6
N


dataset_dummy2*
3
6
N
DOI: 10.5281/zenodo.14335056
title: Barrier properties for PE/PA film made with a single screw extruder followed by METEOR

description: Oxygen (OTR) and Water Vapor (WVTR) transmission rates for PE/PA film made with METEOR Composition and process parameter in sheet 1, data in sheet 2.
DOI: 10.5281/zenodo.14335057
title: Barrier properties for PE/PA film made with a single screw extruder followed by METEOR

description: Oxygen (OTR) and Water Vapor (WVTR) transmission rates for PE/PA film made with METEOR Composition and process parameter in sheet 1, data in sheet 2.
DOI: 10.15468/dl.76medq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Priacanthus japonicus Cuvier, 1829",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026467-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13902402
title: Supplementary materials for paper "Stack Trace Deduplication: Faster, More Accurately, and in More Realistic Scenarios"

description: Update: this was an anonymized version for the double-blind submission and it is no longer actual.

This is a replication package for the paper "Stack Trace Deduplication: Faster, More Accurately, and in More Realistic Scenarios". 

It presents the code of our approach and an instruction for running the experiments.

Since we cannot provide the newly collected industrial dataset due to anonymity restrictions, instead, we append the existing open-source NetBeans dataset in the same format for clarity (it can be found in the `NetBeans` directory, its format is described in the README). Upon acceptance, we will release the new dataset to the research community.

Please find all the istructions in the README.
DOI: 10.5281/zenodo.13902403
title: Supplementary materials for paper "Stack Trace Deduplication: Faster, More Accurately, and in More Realistic Scenarios"

description: Update: this was an anonymized version for the double-blind submission and it is no longer actual.

This is a replication package for the paper "Stack Trace Deduplication: Faster, More Accurately, and in More Realistic Scenarios". 

It presents the code of our approach and an instruction for running the experiments.

Since we cannot provide the newly collected industrial dataset due to anonymity restrictions, instead, we append the existing open-source NetBeans dataset in the same format for clarity (it can be found in the `NetBeans` directory, its format is described in the README). Upon acceptance, we will release the new dataset to the research community.

Please find all the istructions in the README.
DOI: 10.15468/dl.y2kkud
title: Occurrence Download

description: A dataset containing 11311684 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Switzerland",
 "DatasetKey is Swiss National Databank of Vascular Plants",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1950-2024"
 ]
}

 The dataset includes 11311684 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026460-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.43vzbb
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heteropriacanthus cruentatus (Lacepède, 1801)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 115 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026469-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14335090
title: Materials and calberation curve 'Nefopam HCl in situ Mucoadhesive liquid suppository, a potential drug delivery system to enhance bioavailability'
DOI: 10.5281/zenodo.14335091
title: Materials and calberation curve 'Nefopam HCl in situ Mucoadhesive liquid suppository, a potential drug delivery system to enhance bioavailability'
DOI: 10.15468/dl.ahevfa
title: Occurrence Download

description: A dataset containing 175 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Persea Mill."
 ]
}

 The dataset includes 175 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026470-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sng66y
title: Occurrence Download

description: A dataset containing 213 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Occurrences of Spalax zemni"
 ]
}

 The dataset includes 213 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026472-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14335093
title: Dynamic Frequency Sweep tests for PE/PA film made with a single screw extruder followed by METEOR

description: Dynamic Frequency Sweep tests made with a plan/plan rheometer for PE/PA film made with a single screw extruder followed by METEOR

Composition and process parameter in sheet 1, data in sheet 2.
DOI: 10.5281/zenodo.14335094
title: Dynamic Frequency Sweep tests for PE/PA film made with a single screw extruder followed by METEOR

description: Dynamic Frequency Sweep tests made with a plan/plan rheometer for PE/PA film made with a single screw extruder followed by METEOR

Composition and process parameter in sheet 1, data in sheet 2.
DOI: 10.15468/dl.sf6ab9
title: Occurrence Download

description: A dataset containing 488 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physiculus japonicus Hilgendorf, 1879",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 488 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026473-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2d183v
title: CCDC 2205746: Experimental Crystal Structure Determination

description: Related Article: Qi-Fa Chen, Ke-Lin Xian, Hong-Tao Zhang, Xiao-Jun Su, Rong-Zhen Liao, Ming-Tian Zhang|2024|Angew.Chem.,Int.Ed.|63|e202317514|doi:10.1002/anie.202317514
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h35ld
title: CCDC 2296963: Experimental Crystal Structure Determination

description: Related Article: Tasuku Honda, Daiji Ogata, Makoto Tsurui, Satoshi Yoshida, Sota Sato, Takahiro Muraoka, Yuichi Kitagawa, Yasuchika Hasegawa, Junpei Yuasa, Hiroki Oguri|2024|Angew.Chem.,Int.Ed.|63|e202318548|doi:10.1002/anie.202318548
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h35mf
title: CCDC 2296964: Experimental Crystal Structure Determination

description: Related Article: Tasuku Honda, Daiji Ogata, Makoto Tsurui, Satoshi Yoshida, Sota Sato, Takahiro Muraoka, Yuichi Kitagawa, Yasuchika Hasegawa, Junpei Yuasa, Hiroki Oguri|2024|Angew.Chem.,Int.Ed.|63|e202318548|doi:10.1002/anie.202318548
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h35tm
title: CCDC 2296970: Experimental Crystal Structure Determination

description: Related Article: Tasuku Honda, Daiji Ogata, Makoto Tsurui, Satoshi Yoshida, Sota Sato, Takahiro Muraoka, Yuichi Kitagawa, Yasuchika Hasegawa, Junpei Yuasa, Hiroki Oguri|2024|Angew.Chem.,Int.Ed.|63|e202318548|doi:10.1002/anie.202318548
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h35vn
title: CCDC 2296971: Experimental Crystal Structure Determination

description: Related Article: Tasuku Honda, Daiji Ogata, Makoto Tsurui, Satoshi Yoshida, Sota Sato, Takahiro Muraoka, Yuichi Kitagawa, Yasuchika Hasegawa, Junpei Yuasa, Hiroki Oguri|2024|Angew.Chem.,Int.Ed.|63|e202318548|doi:10.1002/anie.202318548
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h35xq
title: CCDC 2296973: Experimental Crystal Structure Determination

description: Related Article: Tasuku Honda, Daiji Ogata, Makoto Tsurui, Satoshi Yoshida, Sota Sato, Takahiro Muraoka, Yuichi Kitagawa, Yasuchika Hasegawa, Junpei Yuasa, Hiroki Oguri|2024|Angew.Chem.,Int.Ed.|63|e202318548|doi:10.1002/anie.202318548
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.14335140
title: Mechanical properties for PE/PA film made with a single screw extruder followed by METEOR

description: Mechanical tensile properties for PE/PA film made with a single screw extruder followed by METEOR

Composition and process parameter in sheet 1, data in sheet 2.
DOI: 10.5281/zenodo.14335141
title: Mechanical properties for PE/PA film made with a single screw extruder followed by METEOR

description: Mechanical tensile properties for PE/PA film made with a single screw extruder followed by METEOR

Composition and process parameter in sheet 1, data in sheet 2.
DOI: 10.15468/dl.kpdpja
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physiculus maximowiczi (Herzenstein, 1896)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 40 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026474-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14335191
title: Strain relaxation measurements for PE/PA film made with a single screw extruder followed by METEOR

description: Strain relaxation measurements made with a plan/plan rheometer for PE/PA film made with a single screw extruder followed by METEOR

Composition and process parameter in sheet 1, data in sheet 2.
DOI: 10.5281/zenodo.14335192
title: Strain relaxation measurements for PE/PA film made with a single screw extruder followed by METEOR

description: Strain relaxation measurements made with a plan/plan rheometer for PE/PA film made with a single screw extruder followed by METEOR

Composition and process parameter in sheet 1, data in sheet 2.
DOI: 10.5284/1125024
title: Data from Trial Pit Investigations at Colne Valley Viaduct, Buckinghamshire and London Borough of Hillingdon, 2018-2022 (HS2 Phase One)

description: This archive can be used independently and/or in in conjunction with the rest of HS2 datasets in order to further investigate the archaeological landscape recorded along the route as. This can also function as a guide to digital archiving for future infrastructure projects benefiting both the commercial sector and the research community.
DOI: 10.15468/dl.5swjn6
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lotella maximowiczi Herzenstein, 1896",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026477-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k67ypj
title: Occurrence Download

description: A dataset containing 278 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is one of (Chile, Peru)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cumulopuntia sphaerica (C.F.Först.) E.F.Anderson"
 ]
}

 The dataset includes 278 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026478-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zd5cfn
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (IDN.9.14_1, IDN.9.2_1)",
 "IucnRedListCategory is VU",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 140 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026479-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gtdvqt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chrysophrys tumifrons Temminck & Schlegel, 1843",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026480-241126133413365/datasets/export for details.
DOI: 10.25405/data.ncl.27249585
title: Behavioural data of speech-in-noise ability, figure-ground segregation performance and demographic information from 159 native British English speakers

description: This data is linked to the article <i>Predicting speech-in-noise ability with static and dynamic auditory figure-ground analysis using structural equation modelling. </i>It contains behavioural data from 159 samples of native British English speakers.
DOI: 10.25405/data.ncl.27249585.v1
title: Behavioural data of speech-in-noise ability, figure-ground segregation performance and demographic information from 159 native British English speakers

description: This data is linked to the article <i>Predicting speech-in-noise ability with static and dynamic auditory figure-ground analysis using structural equation modelling. </i>It contains behavioural data from 159 samples of native British English speakers.
DOI: 10.15468/dl.9s7u7q
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Evynnis japonica Tanaka, 1931",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 74 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026481-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13952279
title: 26/11 Mumbai Terror Network Communication Dataset

description: This dataset provides an adjacency matrix representing the communication dynamics among members of the terrorist group involved in the 26/11 Mumbai attacks. Sourced from Ze L., et al., this dataset contains critical insights into the interactions and relationships among 13 identified members, facilitating a deeper understanding of their operational collaboration.

Dataset Structure:Members: 13 individuals associated with the terrorist group.Format: The dataset is structured as a binary adjacency matrix, where rows and columns correspond to the group members. Each cell in the matrix indicates whether a communication link existed between the corresponding members (1 for communication, 0 for no communication).Key Features:Adjacency Matrix: A 13x13 matrix capturing the communication relationships among members.Binary Representation: Indicates the presence (1) or absence (0) of communication between each pair of members.Purpose and Use Cases:This dataset is intended for researchers and analysts focused on:

Analyzing terrorist communication networks and their structural properties.Exploring the dynamics of group interactions in the context of terrorism.Developing algorithms for network analysis and visualization.

Citation:

[15] Ze L., et al., “Detecting Key Individuals in Terrorist Network Based on FANP Model,” no. Asonam, pp. 724–727, 2014.








 

License

Attribution 4.0 International (CC BY 4.0)Edit
DOI: 10.5281/zenodo.13952280
title: 26/11 Mumbai Terror Network Communication Dataset

description: This dataset provides an adjacency matrix representing the communication dynamics among members of the terrorist group involved in the 26/11 Mumbai attacks. Sourced from Ze L., et al., this dataset contains critical insights into the interactions and relationships among 13 identified members, facilitating a deeper understanding of their operational collaboration.

Dataset Structure:Members: 13 individuals associated with the terrorist group.Format: The dataset is structured as a binary adjacency matrix, where rows and columns correspond to the group members. Each cell in the matrix indicates whether a communication link existed between the corresponding members (1 for communication, 0 for no communication).Key Features:Adjacency Matrix: A 13x13 matrix capturing the communication relationships among members.Binary Representation: Indicates the presence (1) or absence (0) of communication between each pair of members.Purpose and Use Cases:This dataset is intended for researchers and analysts focused on:

Analyzing terrorist communication networks and their structural properties.Exploring the dynamics of group interactions in the context of terrorism.Developing algorithms for network analysis and visualization.

Citation:

[15] Ze L., et al., “Detecting Key Individuals in Terrorist Network Based on FANP Model,” no. Asonam, pp. 724–727, 2014.








 

License

Attribution 4.0 International (CC BY 4.0)Edit