cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15572008
title: LeafMachine2 Data: Urticaceae Leaf Outlines and ECT

description: Urticaceae - 224,532 leaves - 31.3 GB: This repository contains HDF5 (.h5) files with leaf morphological data for species in the Urticaceae family. Each file represents a single leaf specimen and contains leaf shape outlines, the 128x128 ECT matrix, and associated metadata.

File Contents

This dataset contains 224,532 leaves from taxa in the family Urticaceae. Some leaves may be partial, predated, broken, or incomplete. 

Each .h5 file contains the following datasets:



ECT_matrices/ - Euler Characteristic Transform (ECT) matrices capturing topological features of leaf shapes

shapes/shape_0 - Coordinate array (x,y) defining the leaf outline boundary. 

component_names - Original filename identifier (without extension)

group_labels - Taxonomic classification dictionary containing:



family: Taxonomic family name

genus: Genus classification

genus_species: Binomial species name

fullname: Complete taxonomic identifier




Data Format

Files are organized with standardized naming: [Herbarium]_[ID]_[Family]_[Genus]_[Species]__[LeafID].h5

Shape coordinates are normalized to a unit circle centered at the origin (-0.5 to 0.5 range), vertically oriented.

Uncompressed Size:

31.3 GB

Usage

Code for reading, processing, and analyzing these files is available at: https://github.com/Gene-Weaver/LM2-Data-Tools

The repository includes functions for extracting data and generating visualizations.

Citation: Please cite the LeafMachine2 paper and this dataset.



Weaver, W. N., & Smith, S. A. (2023). From leaves to labels: Building modular machine learning networks for rapid herbarium specimen analysis with LeafMachine2. Applications in Plant Sciences, 11(5), e11548. https://doi.org/10.1002/aps3.11548
DOI: 10.15468/dl.23nqgb
title: Occurrence Download

description: A dataset containing 98681 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((120.08242 23.2933,120.22427 23.2933,120.22427 23.40709,120.08242 23.40709,120.08242 23.2933))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year is 2022"
 ]
}

 The dataset includes 98681 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014644-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ra7g8s
title: Occurrence Download

description: A dataset containing 127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coregonus nasus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 127 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025157-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pbex9f
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trichodrymonia splendens (M.Freiberg) M.M.Mora & J.L.Clark"
 ]
}

 The dataset includes 21 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022343-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4udjqe
title: Occurrence Download

description: A dataset containing 147 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micropterus salmoides (Lacepède, 1802)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.2855 -34.7533,20.509 -34.5676,20.509 -32.9007,17.7723 -32.9007,17.8156 -33.0786,18.3471 -33.7176,18.3748 -33.8287,18.2181 -34.0492,18.3197 -34.3408,18.4452 -34.429,18.5435 -34.4213,18.5872 -34.3667,18.5363 -34.167,18.7345 -34.1508,18.7216 -34.3637,18.7808 -34.4521,19.0289 -34.4206,19.0831 -34.4835,19.2655 -34.5017,19.2032 -34.6157,19.2394 -34.6926,19.375 -34.6963,19.6091 -34.8524,19.8251 -34.8396,19.9798 -34.9064,20.1081 -34.8731,20.1517 -34.7847,20.2855 -34.7533))"
 ]
}

 The dataset includes 147 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022345-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kcg9x4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1970",
 "Year is less than or equal to 2000",
 "Month is null",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Batrachoseps luciae Jockusch, Yanev & Wake, 2001"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022344-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.28519640.v2
title: Raw data of evaluation of turmeric genotypes for physico-chemical properties in Salyan, Nepal

description: Turmeric (<i>Curcuma longa</i>) is an important rhizomatous spice crop with good nutritive and medicinal values. With the increasing production of turmeric in Nepal, its export is also increasing. However, the quality of turmeric products has not been up to international standards. In view of solving this problem, an experiment was conducted to evaluate the physico-chemical properties of different turmeric genotypes at the Ginger Research Program, Kapurkot, Salyan in April 2024. The experiment was carried out in a completely randomized design with 11 genotypes, each replicated 3 times. Parameters such as dry recovery %, powder recovery %, bulk density, moisture content of rhizome, pH content, essential oil, and curcumin content were observed. The data was tabulated in MS-Excel and analyzed using R-Studio Version 4.3.3. The inference was drawn at a 5% level of significance, and mean comparisons were made using DMRT. Result showed that curcumin content, essential oil content, and p<sup>H</sup> ranged from 2.81% (KH-2) to 6.07% (Cl 9803), 5.60% (Cl 0209) to 8.33% (Cl 9803), and 6.17 (Cl 0209) to 6.50 (Cl 0207 and Cl 1312), respectively. Dry recovery and powder recovery percentages ranged from 13.89% (Cl 9802) to 18.90% (Cl 9805) and 12.95% (Cl 9802) to 17.94% (Cl 9805), respectively. The highest bulk density was observed in Cl 0201 (1.07 g/cm³), and genotype Cl 9802 (87.05%) had the highest moisture percentage in the rhizome. Overall, the genotype Cl 9803 was identified as the best genotype for production.
DOI: 10.34740/kaggle/dsv/12063582
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.7910/dvn/toricy
title: Replication Data for: Estimating Attention Flow in Online Video Networks

description: The dataset is first introduced in the following paper:
&lt;br&gt;
Siqi Wu, Marian-Andrei Rizoiu, and Lexing Xie. &lt;a href="https://avalanchesiqi.github.io/files/cscw2019network.pdf" target="_blank"&gt;&lt;b&gt;Estimating Attention Flow in Online Video Networks&lt;/b&gt;&lt;/a&gt;. In ACM Conference on Computer-Supported Cooperative Work and Social Computing (CSCW), 2019.
&lt;br&gt;
See more details in this &lt;a href="https://github.com/avalanchesiqi/networked-popularity/tree/master/data" target="_blank"&gt;data description&lt;/a&gt;.
DOI: 10.15468/dl.4tctsg
title: Occurrence Download

description: A dataset containing 13417 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Arthrobacter Conn & Dimmick, 1947"
 ]
}

 The dataset includes 13417 records from 332 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017995-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/7zzwih
title: Whole-genome microsynteny-based phylogeny of angiosperms

description: Datasets used in this study of 'Whole-genome microsynteny-based phylogeny of angiosperms' . This includes all annotated protein sequences in FASTA format of each genome, entire synteny network database (edgelist), network clustering result, trimmed alignments and corresponding phylogenetic trees of BUSCO and CSSC genes, bipartitions with support values for each tree, and binary data matrices. Related codes and software parameters are available at Github (https://github.com/zhaotao1987/Syn-MRL).
DOI: 10.7910/dvn/7zzkc7
title: Supporting data

description: Supporting data for "University of Calgary Rapid Vehicle-based Methane Emissions Mapping System (PoMELO) Single-Blind Testing Results from the Methane Emissions Technology Evaluation Center (METEC)"
DOI: 10.15468/dl.pyr4pj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sciurus striatus Linnaeus, 1758",
 "StateProvince is one of (Alabama, Connecticut, Delaware, Florida, Georgia, Illinois, Indiana, Kentucky, Maine, Maryland, Massachusetts, Michigan, Mississippi, New Hampshire, New Jersey, New York, North Carolina, Ohio, Pennsylvania, Rhode Island, South Carolina, Tennessee, Vermont, Virginia, West Virginia, Wisconsin)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017999-250525065834625/datasets/export for details.
DOI: 10.7910/dvn/tpynu
title: Senate Unpassed Legislation 1851, Docket 13162, SC1/series 231, Petition of James O. Stetson

description: &lt;p&gt;Petition subject: Fugitive slave laws &lt;/p&gt; &lt;p&gt;Original: &lt;a href="http://nrs.harvard.edu/urn-3:FHCL:11858308"&gt;http://nrs.harvard.edu/urn-3:FHCL:11858308&lt;/a&gt; &lt;/p&gt; &lt;p&gt;Date of creation: (unknown) &lt;/p&gt; &lt;p&gt;Petition location: West Bridgewater &lt;/p&gt; &lt;p&gt;Legislator, committee, or address that the petition was sent to: Asahel Hathaway, Bridgewater &lt;/p&gt; &lt;p&gt;Selected signatures:&lt;ol&gt;&lt;li&gt;James O. Stetson&lt;/li&gt;&lt;li&gt;Salome Stetson&lt;/li&gt;&lt;li&gt;Mary H. Hayward&lt;/li&gt;&lt;/ol&gt; &lt;/p&gt; &lt;p&gt;Total signatures: 263 &lt;/p&gt; &lt;p&gt;Legal voter signatures (males not identified as non-legal): 129 &lt;/p&gt; &lt;p&gt;Female signatures: 95 &lt;/p&gt; &lt;p&gt;Other male signatures: 30 &lt;/p&gt; &lt;p&gt;Unidentified signatures: 9 &lt;/p&gt; &lt;p&gt;Female only signatures: No &lt;/p&gt; &lt;p&gt;Identifications of signatories: inhabitants, legal voters, other persons, [females], [other males], ["others"] &lt;/p&gt; &lt;p&gt;Prayer format was &lt;a href="http://en.wikipedia.org/wiki/Printing"&gt;printed&lt;/a&gt; vs. &lt;a href="http://en.wikipedia.org/wiki/Manuscript"&gt;manuscript&lt;/a&gt;: Printed &lt;/p&gt; &lt;p&gt;Signatory column format: column separated &lt;/p&gt; &lt;p&gt;Additional non-petition or unrelated documents available at archive: no additional documents &lt;/p&gt; &lt;p&gt;Location of the petition at the Massachusetts Archives of the Commonwealth: Senate Unpassed 1851, Docket 13162 &lt;/p&gt; &lt;p&gt;Acknowledgements: Supported by the National Endowment for the Humanities (PW-5105612), Massachusetts Archives of the Commonwealth, Radcliffe Institute for Advanced Study at Harvard University, Center for American Political Studies at Harvard University, Institutional Development Initiative at Harvard University, and Harvard University Library.&lt;/p&gt;
DOI: 10.7910/dvn/83ra7w
title: Measuring The Impacts Of Colonialism: A New Data Set For The Countries Of Africa And Asia

description: For questions, please contact Patrick Ziltener (zaibat@soziologie.uzh.ch).
DOI: 10.7910/dvn/85zekb
title: E-Procurement Research Dataset (1975-2019)

description: The e-procurement research & publication dataset, which was indexed by Scopus from 1975 to 2019. The dataset contains 1,389 documents data: authors, authors ID Scopus, title, year, source title, volume, issue, article number in Scopus, DOI, link, affiliation, abstract, index keywords, references, correspondence address, editors, publisher, conference name, conference date, conference code, ISSN, language, document type, access type, and EID.
description: Scopus.com
DOI: 10.7910/dvn/to0pwk
title: Replication Data for: Promoting sustainable development through trade? EU trade agreements and global value chains

description: Sustainable development provisions have become an integral part of the European Union's (EU's) ‘new generation’ trade agreements. Yet, a growing number of empirical works show that their design varies significantly, even in the trade agreements signed with countries at similar (low) levels of development. We contend that this variation can be accounted for by discussing how the growing integration of the EU economy with specific developing countries across global value chains (GVCs) affects the domestic politics of regulatory export in the EU. European firms that operate within GVCs rely on imports of inputs produced in low-labor cost countries. These firms tend to oppose the export of those regulatory burdens that generate an increase in their imports' variable costs. The political mobilization of these actors weakens domestic coalitions supporting regulatory export strategies, which explains why the EU adopts a more lenient approach over the inclusion of sustainable development provisions in Preferential Trade Agreement negotiations with some developing countries.
DOI: 10.7910/dvn/v1nd0b
title: Per-emb-32, image data

description: Imaged continuum and spectral line cubes for Per-emb-32
DOI: 10.7910/dvn/a0tsvt
title: The home state effect: How subnational governments shape climate coalitions

description: This package contains replication files for "Mobilizing from Below: The Home State Effect on Climate Coalitions". Please see the "readme" for more information.
DOI: 10.7910/dvn/9xlf4o
title: An on-Farm Performance Assessment of Aquaculture Production Systems in Nigeria

description: The survey was implemented to assess on-farm performance of
aquaculture fish production systems in Nigeria. The primary
sampling unit was aquaculture farming households/farms. The
survey comprised the following modules: (1) farmer
characteristics; (2) aquaculture production and marketing
activities including input use and cost as well as output harvested
and sold; (3) Aquaculture experience, change and livelihoods; (4)
aquaculture credit and association; (5) food safety and
willingness to participate in aquaculture certification; Data on
aquaculture production were collected at farm level. The survey
captured detailed data about all types of systems and practices
allowing for a characterization of farming systems
DOI: 10.7910/dvn/tmgayb
title: Distribution change in GenBank submission networks: 1992-2018.

description: Degree centrality plotted on the y-axis with network nodes sorted from largest to smallest on the x-axis. Point colors reflect the networks nodes are in. (Red: data submission; blue: publication; purple: both) The highest degree nodes in 2017 and 2018 (red) may reflect a professionalization of data submission administration. The visualizations were generated with External dataset S1: data submission network graph: https://doi.org/10.7910/DVN/4QUAXY and publication network graph: https://doi.org/10.7910/DVN/YGWKLA.
DOI: 10.7910/dvn/a0zc97
title: Replication Data for: "Trade and Uncertainty"

description: Novy, Dennis, and Taylor, Alan M., (2020) “Trade and Uncertainty.” Review of Economics and Statistics 102:4, 749-765.
DOI: 10.7910/dvn/o0cdzb
title: Biodiversity and dietary diversity in Vihiga Kenya

description: The objective of the study was to assess contribution of local agrobiodiversity to the diet and assess diet diversity in Vihiga County, Western Kenya // the dataset also serves as baseline survey in a 3 year project on participatory development of interventions to diversify diets in Vihiga.
Dietary assessment was conducted using two non-consecutive 24 hour recalls from 1580 women and children in plenty and lean seasons. Household measures, monetary values, direct weighing, or clay moulding were used to assess portion sizes. We also estimated quantities of foods in form of fluids using volume estimations. Food compostion tables used were the following: Tanzanian food composition (Lukmanji et al., 2008) complemented with information from the USDA food composition table (USDA, 2014), the Kenyan food composition table (Sehmi, 1993) and the West African food composition table (Stadlmayr et al., 2012). Nutrients composition of raw ingredients was converted into cooked ones using the USDA Table for Nutrient Retention Factors (2007). Species Identification was done at the East African Herbarium, Botany department of National of Museums of Kenya for missing or unknown species.
DOI: 10.7910/dvn/tqj2pj
title: Scaling models for Regreening Africa: enhancing agroecological integration through smallholders’ assets and agency in Kenya

description: Urgent action is needed to address climate change, land degradation, and biodiversity loss. The Regreening Africa project (2017–2023), recently recognized as a UN World Restoration Flagship, aimed to reverse land degradation over large areas of land for the triple benefit of people, biodiversity, and climate in eight African countries. Based on projections and early lessons learned, the project sought to identify sustainable scaling models to achieve its ambitious targets. The so-called “Asset-Based Community-driven Development (ABCD) in Regreening” project aimed to demonstrate the positive contribution of deliberate community engagement and co-design. The project introduced ABCD sessions to 30 purposively selected community groups in the Regreening intensification sites in western Kenya. ABCD combines a unique set of framings, methods, and processes that focus on people’s assets and agency, and emphasizes the importance of their attitudes toward self and others for sustainable behavior change. To evidence that ABCD intrinsically contributes to sustainable adoption and scaling of Regreening practices, the project developed the F-ACT+ tool to assess the alignment between ABCD and agroecological practices, and collected baseline and endline data from 300 project and 300 non-project participants. Results showed accelerated agroecological integration among ABCD project participants. ABCD participants showed significant improvements in nine agroecological principles and eight system components, particularly in the economic diversification, social values and diets, and knowledge co-creation principles, as well as in the pest and disease, household, and value chain system components. Summary ATT between ABCD and non-ABCD respondents was positive and significant in 10 principles and eight system components. The results support the synergistic contribution of ABCD to projects targeting sustainable behavior change at the individual and collective levels. Due to its focus on outcomes, this study provided limited insight into the specific mechanisms of ABCD, which are the subject of a separate publication on parallel theory-based contribution analysis work.
description: KoboToolbox, null
DOI: 10.7910/dvn/v0vvwa
title: Aligning the Thomson scattering and charge exchange recombination diagnostics using neutral beam emission at DIII-D

description: This work addresses discrepancies in the alignment of the H-mode pedestal profiles of the electron and ion properties in the DIII-D tokamak as measured by Thomson Scattering (TS) and Charge Exchange Recombination Spectroscopy (CER) diagnostics. While the alignment of these profiles is key for accurate studies of tokamak physics and plasma confinement, misalignments can occur due to inaccuracies, such as in magnetic equilibrium reconstructions required to map measurements in different poloidal and toroidal locations. Both FIDASIM, an established simulation package, and a simplified collisional radiative model are used to simulate neutral beam state densities and neutral beam emission. Simulated neutral beam emissions are calculated based on shifted TS profiles and compared to beam emission measurements from the Main Ion CER system to determine the best shift for aligning TS with CER. This analysis is performed on various DIII-D discharges.
description: PSFC REPORT PSFC/JA-24-10<br><br>This material is based upon work supported by the U.S. Department of Energy, Office of Science, Office of Fusion Energy Sciences, using the DIII-D National Fusion Facility, a DOE Office of Science user facility, under Award Nos. DE-FC02-04ER54698 and DE-AC02-09CH11466. This work was also supported in part by the U.S. DOE under the Science Undergraduate Laboratory Internships (SULIs) Program at General Atomics.<br><br>If this record does not contain the full text, then the manuscript has been embargoed by the publisher thus restricting open access for 12 to 24 months after publication.
DOI: 10.7910/dvn/80xslu
title: California Poll: 6804 -- July 1-15, 1968

description: The Field Poll, established in 1945 as The California Poll by Mervin Field, has operated continuously as an independent, non-partisan, media-sponsored public opinion news service. Each year the Field Polls cover a wide range of political and social topics examining California public opinion. Continuing measures are made of voter support for leading political figures vying for major state and federal offices, job ratings of important political figures and reactions to significant political events. Voter awareness, understanding and predispositions of major campaign issues and salient statewide ballot propositions are also tracked over time. For poll 6804 N=1294.
description: Subject: STANDARD DEPOSIT TERMS 1.0 Type: DATAPASS:TERMS:STANDARD:1.0 Notes: The UCLA Social Science Data Archive (“the Archive”) gives permission and any required licenses to Data-PASS to make the Content available for archiving, preservation and access (with permission of the Archive), within the Data Preservation Alliance for the Social Sciences ("Data-PASS") in accordance with the Data-PASS terms (the "Terms") of use (available from: http://www.icpsr.org/Data-PASS). Including permission to: (a) redisseminate copies of the Data Collection in a variety of distribution formats only according to the standard terms of use of the Archive; (b) promote and advertise the Data Collection in any publicity (in any form) for Data-PASS and the Archive; (c) describe, catalog, validate and document the Content; (d) store, translate, copy or re-format the Data Collection in any way to ensure its future preservation and accessibility, improve usability and/or protect respondent confidentiality; (e) incorporate metadata (cataloging information) or documentation regarding this study into public access catalogues. The Archive represents and warrants that the Content conforms to all Terms and that the Archive is lawfully entitled and has full authority to license Data-Pass to use the Materials in the ways described in the Terms.;