cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/114341
title: Water Temperature data collected during research cruise OC1310B using a Sea-Bird SBE-38 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405157
title: Additional file 29: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S19. List of the â guide genesâ of nine subnetwork, and their related information. (XLS 37 kb)
DOI: 10.6084/m9.figshare.7405160
title: Additional file 2 of Sample size calculation in multi-centre clinical trials

description: This file contains all source code used for simulations. (R 13 kb)
DOI: 10.6084/m9.figshare.7405160.v1
title: Additional file 2 of Sample size calculation in multi-centre clinical trials

description: This file contains all source code used for simulations. (R 13 kb)
DOI: 10.6084/m9.figshare.7405163.v1
title: Additional file 2: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S2. A table shows 180 new names of wheat bHLHs side by side with previous ones. (XLS 73 kb)
DOI: 10.7284/114342
title: Transmissometer data collected during research cruise OC1310B using a WET Labs C-Star instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405157.v1
title: Additional file 29: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S19. List of the â guide genesâ of nine subnetwork, and their related information. (XLS 37 kb)
DOI: 10.7284/114343
title: TSG (Thermosalinograph) data collected during research cruise OC1310B using a Sea-Bird SBE-45 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405145
title: Additional file 28: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S18. Summary of the significantly enriched GO terms (q-value &lt; 0.001) of genes in each co-expression module. BP, biological process; MF, molecule function; CC, cellular component. (XLS 279 kb)
DOI: 10.6084/m9.figshare.7405148
title: Additional file 2: of Phenotypic and genomic comparison of Photorhabdus luminescens subsp. laumondii TT01 and a widely used rifampicin-resistant Photorhabdus luminescens laboratory strain

description: Table S3b. Mapping of gene codes between the TT01, TT01m and DJC genomes. (XLSX 191 kb)
DOI: 10.6084/m9.figshare.7405148.v1
title: Additional file 2: of Phenotypic and genomic comparison of Photorhabdus luminescens subsp. laumondii TT01 and a widely used rifampicin-resistant Photorhabdus luminescens laboratory strain

description: Table S3b. Mapping of gene codes between the TT01, TT01m and DJC genomes. (XLSX 191 kb)
DOI: 10.7284/119874
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise OC1401A using a Hawaii UHDAS instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405145.v1
title: Additional file 28: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S18. Summary of the significantly enriched GO terms (q-value &lt; 0.001) of genes in each co-expression module. BP, biological process; MF, molecule function; CC, cellular component. (XLS 279 kb)
DOI: 10.7284/119861
title: Anemometer data collected during research cruise OC1401A using a Gill WindObserver II instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119859
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise OC1401A using a Sea-Bird SBE-911+ instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405118
title: Additional file 7: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: Matlab version of the model. (MAT 48Â kb)
DOI: 10.6084/m9.figshare.7405115
title: Additional file 25: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S17. The RPKM values for 147 ZmbHLHs after F. verticillioides infection. (XLS 42 kb)
DOI: 10.7284/119863
title: Fluorometer data collected during research cruise OC1401A using a WET Labs WETStar instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405109
title: Additional file 6: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: SBML version of the model. (XML 716Â kb)
DOI: 10.6084/m9.figshare.7405115.v1
title: Additional file 25: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S17. The RPKM values for 147 ZmbHLHs after F. verticillioides infection. (XLS 42 kb)
DOI: 10.6084/m9.figshare.7405118.v1
title: Additional file 7: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: Matlab version of the model. (MAT 48Â kb)
DOI: 10.6084/m9.figshare.7405106
title: Additional file 24: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S16. Convertion of maize AGPv3 gene IDs to maize AGPv4 gene IDs. (XLS 63 kb)
DOI: 10.6084/m9.figshare.7405109.v1
title: Additional file 6: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: SBML version of the model. (XML 716Â kb)
DOI: 10.7284/117336
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1401A using a Ashtech ADU5 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405100
title: Additional file 23: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S15. The TPM values of 88 TabHLHs under stripe rust (S) and powdery mildew (P) stresses. (XLS 41 kb)
DOI: 10.6084/m9.figshare.7405106.v1
title: Additional file 24: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S16. Convertion of maize AGPv3 gene IDs to maize AGPv4 gene IDs. (XLS 63 kb)
DOI: 10.6084/m9.figshare.7405097
title: Additional file 5: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: Simulation file. (XLSX 226Â kb)
DOI: 10.6084/m9.figshare.7405100.v1
title: Additional file 23: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S15. The TPM values of 88 TabHLHs under stripe rust (S) and powdery mildew (P) stresses. (XLS 41 kb)
DOI: 10.7284/119864
title: Gyrocompass data collected during research cruise OC1401A using a Sperry MK-37 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405085
title: Additional file 22: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S14. List of primers used in this study for qPCR. (XLS 27 kb)
DOI: 10.6084/m9.figshare.7405097.v1
title: Additional file 5: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: Simulation file. (XLSX 226Â kb)
DOI: 10.7284/119866
title: Hygrometer data collected during research cruise OC1401A using a Vaisala HMT300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405082
title: Additional file 4: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: List of reactions. (XLSX 98Â kb)
DOI: 10.6084/m9.figshare.7405085.v1
title: Additional file 22: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S14. List of primers used in this study for qPCR. (XLS 27 kb)
DOI: 10.6084/m9.figshare.7405082.v1
title: Additional file 4: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: List of reactions. (XLSX 98Â kb)
DOI: 10.6084/m9.figshare.7405070
title: Additional file 21: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S13. The RPKM values of 59 OsbHLHs under drought stress. (XLS 29 kb)
DOI: 10.7284/119865
title: PTU (Pressure, Temperature, Humidity) data collected during research cruise OC1401A using a Vaisala PTU300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405064
title: Additional file 3: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: Links of the KEGG reactions. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.7405070.v1
title: Additional file 21: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S13. The RPKM values of 59 OsbHLHs under drought stress. (XLS 29 kb)
DOI: 10.7284/119867
title: Radiometer data collected during research cruise OC1401A using a RMR Co. PRP instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405064.v1
title: Additional file 3: of CiliateGEM: an open-project and a tool for predictions of ciliate metabolic variations and experimental condition design

description: Links of the KEGG reactions. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.7405058
title: Additional file 20: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S12. The FPKM values of 78 ZmbHLHs under drought stress. (XLS 71 kb)
DOI: 10.7284/119868
title: Radiometer data collected during research cruise OC1401A using a Biospherical QSR-2200 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405058.v1
title: Additional file 20: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S12. The FPKM values of 78 ZmbHLHs under drought stress. (XLS 71 kb)
DOI: 10.7284/119869
title: Rain Gauge data collected during research cruise OC1401A using a RM Young 50202 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405043
title: Additional file 1: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S1. List of 1154 bHLHs from Arabidopsis, rice, maize and wheat and their related information. (XLS 509 kb)
DOI: 10.7284/119860
title: Singlebeam Echosounder data collected during research cruise OC1401A using a Knudsen 3260 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405043.v1
title: Additional file 1: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S1. List of 1154 bHLHs from Arabidopsis, rice, maize and wheat and their related information. (XLS 509 kb)
DOI: 10.7284/119862
title: Singlebeam Echosounder data collected during research cruise OC1401A using a Knudsen 3260 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405025
title: Additional file 19: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S11. The TPM values of 80 TabHLHs under drought stress. (XLS 39 kb)
DOI: 10.7284/119870
title: Speedlog data collected during research cruise OC1401A using a Furuno DS-50 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405019
title: Additional file 2: of Putative chemosensory receptors are differentially expressed in the sensory organs of male and female crown-of-thorns starfish, Acanthaster planci

description: File S1. Results of differential gene expression analysis in comparisons 1â 3. (XLSX 11659 kb)
DOI: 10.6084/m9.figshare.7405025.v1
title: Additional file 19: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S11. The TPM values of 80 TabHLHs under drought stress. (XLS 39 kb)
DOI: 10.6084/m9.figshare.7405019.v1
title: Additional file 2: of Putative chemosensory receptors are differentially expressed in the sensory organs of male and female crown-of-thorns starfish, Acanthaster planci

description: File S1. Results of differential gene expression analysis in comparisons 1â 3. (XLSX 11659 kb)
DOI: 10.7284/119858
title: Water Temperature data collected during research cruise OC1401A using a Sea-Bird SBE-48 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/119871
title: Water Temperature data collected during research cruise OC1401A using a Sea-Bird SBE-38 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405001
title: Additional file 16: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S10. The FPKM values of 110 OsbHLHs in seven tissues. (XLS 35 kb)
DOI: 10.7284/119872
title: Transmissometer data collected during research cruise OC1401A using a WET Labs C-Star instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7405001.v1
title: Additional file 16: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S10. The FPKM values of 110 OsbHLHs in seven tissues. (XLS 35 kb)
DOI: 10.6084/m9.figshare.7404992
title: Additional file 7: of Time series analysis of neoadjuvant chemotherapy and bevacizumab-treated breast carcinomas reveals a systemic shift in genomic aberrations

description: Table S6. Aberrant genes in &gt; 30% of the samples at week 25 within the Chemotherapy arm. (XLSX 72 kb)
DOI: 10.7284/119873
title: TSG (Thermosalinograph) data collected during research cruise OC1401A using a Sea-Bird SBE-45 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7404989
title: Additional file 15: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S9. The FPKM values of 188 ZmbHLHs in 18 tissues. (XLS 78 kb)
DOI: 10.6084/m9.figshare.7404992.v1
title: Additional file 7: of Time series analysis of neoadjuvant chemotherapy and bevacizumab-treated breast carcinomas reveals a systemic shift in genomic aberrations

description: Table S6. Aberrant genes in &gt; 30% of the samples at week 25 within the Chemotherapy arm. (XLSX 72 kb)
DOI: 10.6084/m9.figshare.7404977
title: Additional file 14: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S8. The TPM values of 209 TabHLHs in 15 tissues. (XLS 85 kb)
DOI: 10.6084/m9.figshare.7404983
title: Additional file 3: of Combined linkage and association mapping reveal QTL for host plant resistance to common rust (Puccinia sorghi) in tropical maize

description: Pedigree of the tropical maize inbred lines constituting the drought tolerant maize for Africa (DTMA) panel. (XLSX 21â kb)
DOI: 10.6084/m9.figshare.7404989.v1
title: Additional file 15: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S9. The FPKM values of 188 ZmbHLHs in 18 tissues. (XLS 78 kb)
DOI: 10.7284/119890
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise OC1404A using a Hawaii UHDAS instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7404974
title: Additional file 6: of Time series analysis of neoadjuvant chemotherapy and bevacizumab-treated breast carcinomas reveals a systemic shift in genomic aberrations

description: Table S5. Aberrant genes in &gt; 30% of the samples at week 12 within the Chemotherapy arm. (XLSX 71 kb)
DOI: 10.6084/m9.figshare.7404977.v1
title: Additional file 14: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S8. The TPM values of 209 TabHLHs in 15 tissues. (XLS 85 kb)
DOI: 10.6084/m9.figshare.7404974.v1
title: Additional file 6: of Time series analysis of neoadjuvant chemotherapy and bevacizumab-treated breast carcinomas reveals a systemic shift in genomic aberrations

description: Table S5. Aberrant genes in &gt; 30% of the samples at week 12 within the Chemotherapy arm. (XLSX 71 kb)
DOI: 10.6084/m9.figshare.7404983.v1
title: Additional file 3: of Combined linkage and association mapping reveal QTL for host plant resistance to common rust (Puccinia sorghi) in tropical maize

description: Pedigree of the tropical maize inbred lines constituting the drought tolerant maize for Africa (DTMA) panel. (XLSX 21â kb)
DOI: 10.6084/m9.figshare.7404962
title: Additional file 13: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S7. Summary of RNA-seq data generated and mapping statistics. (XLS 35 kb)
DOI: 10.6084/m9.figshare.7404968
title: Additional file 2: of Combined linkage and association mapping reveal QTL for host plant resistance to common rust (Puccinia sorghi) in tropical maize

description: Response of inbred lines constituting the drought tolerant maize for Africa association mapping panel to common rust in different environments. (XLSX 34â kb)
DOI: 10.6084/m9.figshare.7404968.v1
title: Additional file 2: of Combined linkage and association mapping reveal QTL for host plant resistance to common rust (Puccinia sorghi) in tropical maize

description: Response of inbred lines constituting the drought tolerant maize for Africa association mapping panel to common rust in different environments. (XLSX 34â kb)
DOI: 10.7284/119878
title: Anemometer data collected during research cruise OC1404A using a Gill WindObserver II instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7404962.v1
title: Additional file 13: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S7. Summary of RNA-seq data generated and mapping statistics. (XLS 35 kb)
DOI: 10.7284/119876
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise OC1404A using a Sea-Bird SBE-911+ instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7404953
title: Additional file 5: of Time series analysis of neoadjuvant chemotherapy and bevacizumab-treated breast carcinomas reveals a systemic shift in genomic aberrations

description: Table S4. Aberrant genes in &gt; 30% of the samples at week 25 within the Combination arm. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.7404953.v1
title: Additional file 5: of Time series analysis of neoadjuvant chemotherapy and bevacizumab-treated breast carcinomas reveals a systemic shift in genomic aberrations

description: Table S4. Aberrant genes in &gt; 30% of the samples at week 25 within the Combination arm. (XLSX 25 kb)
DOI: 10.7284/119879
title: Fluorometer data collected during research cruise OC1404A using a WET Labs WETStar instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7404944
title: Additional file 12: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S6. The distribution of cis-regulatory elements in TabHLH promoters. â Yâ means that the element is present in the promoter region. (XLS 648 kb)
DOI: 10.6084/m9.figshare.7404944.v1
title: Additional file 12: of Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat

description: Table S6. The distribution of cis-regulatory elements in TabHLH promoters. â Yâ means that the element is present in the promoter region. (XLS 648 kb)
DOI: 10.7284/117337
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1404A using a Ashtech ADU5 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7404926
title: Additional file 1: of Proteomic profiling of senescent human diploid fibroblasts treated with gamma-tocotrienol

description: Table S1. Protein lists for the datasets. (XLSX 111 kb)
DOI: 10.6084/m9.figshare.7404932
title: Additional file 4: of Time series analysis of neoadjuvant chemotherapy and bevacizumab-treated breast carcinomas reveals a systemic shift in genomic aberrations

description: Table S3. Aberrant genes in &gt; 30% of the samples at week 12 within the Combination arm. (XLSX 26 kb)
DOI: 10.6084/m9.figshare.7404926.v1
title: Additional file 1: of Proteomic profiling of senescent human diploid fibroblasts treated with gamma-tocotrienol

description: Table S1. Protein lists for the datasets. (XLSX 111 kb)
DOI: 10.6084/m9.figshare.7404923
title: Additional file 2: of In vivo induction of membrane damage by Î˛-amyloid peptide oligomers

description: Individual Experiment Data. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.7404932.v1
title: Additional file 4: of Time series analysis of neoadjuvant chemotherapy and bevacizumab-treated breast carcinomas reveals a systemic shift in genomic aberrations

description: Table S3. Aberrant genes in &gt; 30% of the samples at week 12 within the Combination arm. (XLSX 26 kb)
DOI: 10.7284/119880
title: Gyrocompass data collected during research cruise OC1404A using a Sperry MK-37 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7404923.v1
title: Additional file 2: of In vivo induction of membrane damage by Î˛-amyloid peptide oligomers

description: Individual Experiment Data. (XLSX 21 kb)
DOI: 10.7284/119882
title: Hygrometer data collected during research cruise OC1404A using a Vaisala HMT300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7404911
title: Additional file 3: of Time series analysis of neoadjuvant chemotherapy and bevacizumab-treated breast carcinomas reveals a systemic shift in genomic aberrations

description: Table S2. Genes and loci with significantly difference in logR estimates between the two extreme response groups GR and NR (t-test, FDR p-value