cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11099915.v1
title: Supplementary data for R package FcircSEC

description: This supplementary data includes transcript data, circRNA classification information and full length circRNA sequences for different species
DOI: 10.6084/m9.figshare.11097977
title: Physicochemical and sensory properties of terasi, an Indonesian fermented shrimp (Acetes japonicus)

description: The data are the result for colour measurement, proximate composition of terasi, amino acid, and volatile compounds of terasi
DOI: 10.6084/m9.figshare.11097977.v1
title: Physicochemical and sensory properties of terasi, an Indonesian fermented shrimp (Acetes japonicus)

description: The data are the result for colour measurement, proximate composition of terasi, amino acid, and volatile compounds of terasi
DOI: 10.6084/m9.figshare.11097479
title: Tephrostratigraphic constraints on sedimentation and tectonism in the Whanganui Basin, New Zealand

description: In the following paper, we apply digital mapping techniques and tephrostratigraphy to correlate marker horizons across the Whanganui Basin, culminating in a new 1:25,000 geological map of the central Rangitikei. This is achieved by (1) compilation of existing research, (2) correlation of major element glass shard datasets to known eruptive products and (3) completion of a three-year field survey. We update and refine existing stratigraphic correlations, focusing on two critical units within the basin succession; namely the Makirikiri Tuff (1.6 Ma) and Kaimatira Pumice Sand (1 Ma) formations. Okehu Group is proposed to cover all strata from Pakihikura to Potaka pumice. Rewa Pumice is placed within its own formation bridging the Makirikiri Tuff and Kaimatira Pumice Sand formations. Mapping and analysis facilitate placement of Coutts Creek Horizon within Rewa Formation. Sub-aerial surfaces and influxes of greywacke and volcaniclastic detritus from c. 1.6 Ma onward provide evidence for an alluvial plain developing at the foot of the uplifting, paleo-axial range. We suggest uplift in the paleo-axial range occurred contemporaneously with the onset of rhyolitic activity at Mangakino caldera (c. 1.6 Ma) so that the first influxes of fluvial conglomerate and volcaniclastics occur in close proximity within the eastern basin succession.
DOI: 10.6084/m9.figshare.11097479.v1
title: Tephrostratigraphic constraints on sedimentation and tectonism in the Whanganui Basin, New Zealand

description: In the following paper, we apply digital mapping techniques and tephrostratigraphy to correlate marker horizons across the Whanganui Basin, culminating in a new 1:25,000 geological map of the central Rangitikei. This is achieved by (1) compilation of existing research, (2) correlation of major element glass shard datasets to known eruptive products and (3) completion of a three-year field survey. We update and refine existing stratigraphic correlations, focusing on two critical units within the basin succession; namely the Makirikiri Tuff (1.6 Ma) and Kaimatira Pumice Sand (1 Ma) formations. Okehu Group is proposed to cover all strata from Pakihikura to Potaka pumice. Rewa Pumice is placed within its own formation bridging the Makirikiri Tuff and Kaimatira Pumice Sand formations. Mapping and analysis facilitate placement of Coutts Creek Horizon within Rewa Formation. Sub-aerial surfaces and influxes of greywacke and volcaniclastic detritus from c. 1.6 Ma onward provide evidence for an alluvial plain developing at the foot of the uplifting, paleo-axial range. We suggest uplift in the paleo-axial range occurred contemporaneously with the onset of rhyolitic activity at Mangakino caldera (c. 1.6 Ma) so that the first influxes of fluvial conglomerate and volcaniclastics occur in close proximity within the eastern basin succession.
DOI: 10.6084/m9.figshare.11097329
title: MZ_0020_002_Neophyllobius_electrus_40x_legI_right_dorsal_parttwo

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11097329.v1
title: MZ_0020_002_Neophyllobius_electrus_40x_legI_right_dorsal_parttwo

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11097128
title: MZ_0019_002_Neophyllobius_electrus_40x_legI_right_dorsal_partone

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11097128.v1
title: MZ_0019_002_Neophyllobius_electrus_40x_legI_right_dorsal_partone

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11097041
title: MZ_0018_002_Neophyllobius_electrus_40x_legI_left_dorsal_parttwo

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11096660
title: MZ_0017_002_Neophyllobius_electrus_40x_legI_left_dorsal_partone

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11096906
title: Data Figures

description: These datasets have been obtained during two experiments with bees tested in a virtual reality device.
DOI: 10.6084/m9.figshare.11097041.v1
title: MZ_0018_002_Neophyllobius_electrus_40x_legI_left_dorsal_parttwo

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11096906.v1
title: Data Figures

description: These datasets have been obtained during two experiments with bees tested in a virtual reality device.
DOI: 10.6084/m9.figshare.11096660.v1
title: MZ_0017_002_Neophyllobius_electrus_40x_legI_left_dorsal_partone

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11096450
title: MZ_0017x_002_Neophyllobius_electrus_10x_specimen_dorsal

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Plan Apochromat Lambda 10X + DIC
DOI: 10.6084/m9.figshare.11096450.v1
title: MZ_0017x_002_Neophyllobius_electrus_10x_specimen_dorsal

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Plan Apochromat Lambda 10X + DIC
DOI: 10.6084/m9.figshare.11096225
title: MZ_0016_002_Neophyllobius_electrus_40x_ventralcuticlesecondpreparation

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11096225.v1
title: MZ_0016_002_Neophyllobius_electrus_40x_ventralcuticlesecondpreparation

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11093864
title: Multiple xylosyltransferases heterogeneously xylosylate protein N-linked glycans in Chlamydomonas reinhardtii

description: <br><pre>Multiple xylosyltransferases heterogeneously xylosylate protein N-linked glycans in Chlamydomonas reinhardtii</pre>
DOI: 10.6084/m9.figshare.11093345
title: 3D tomographic and surface data of Ellopetalichthys scheii

description: Tomography data, 3D segmentation files (STL), and photogrammetric 3D surface scan of Ellopetalichthys scheii
DOI: 10.6084/m9.figshare.11093345.v1
title: 3D tomographic and surface data of Ellopetalichthys scheii

description: Tomography data, 3D segmentation files (STL), and photogrammetric 3D surface scan of Ellopetalichthys scheii
DOI: 10.6084/m9.figshare.11093864.v1
title: Raw data xylosyltransferases.7z

description: <br><b><i><b>Xylosylation of protein <i>N</i>-linked glycans<i> </i>in <i>Chlamydomonas reinhardtii<br></i></b></i></b>
DOI: 10.6084/m9.figshare.11091116
title: Building on shaky foundations? Lack of falsification and knowledge contestation in IS theories, methods, and practices

description: Among the defining characteristics of a healthy research discipline is the ability to correct its knowledge if more recent evidence creates grounds for this. Studies that reveal errors in earlier theories demonstrate, in line with Karl Popper’s thinking, an approach called <i>falsificationism</i>. They complement approaches aimed at developing and expanding knowledge by generalising empirical observations or postulating new contributions and testing them. The paper presents an analysis that applies this categorisation to abstracts of research papers (<i>N</i> = 5,202) in the eight leading IS journals. Machine-learning-based classification determined that only 7.0% of the papers manifested any clear form of knowledge-contestation, such as falsification, in the approach or findings presented. In light of this, we call on IS researchers to increase the falsification and knowledge-contestation in their research, to nurture more valid theories, methods, and practices, thereby achieving greater societal impact. We present two suitable IS research designs accordingly: knowledge-contesting comparisons and knowledge-contesting replications. We also discuss how these designs, exemplifying opportunities to increase the number of knowledge-contesting studies in the field, can be applied in both positivist and interpretivist research epistemology.
DOI: 10.6084/m9.figshare.11091116.v1
title: Building on shaky foundations? Lack of falsification and knowledge contestation in IS theories, methods, and practices

description: Among the defining characteristics of a healthy research discipline is the ability to correct its knowledge if more recent evidence creates grounds for this. Studies that reveal errors in earlier theories demonstrate, in line with Karl Popper’s thinking, an approach called <i>falsificationism</i>. They complement approaches aimed at developing and expanding knowledge by generalising empirical observations or postulating new contributions and testing them. The paper presents an analysis that applies this categorisation to abstracts of research papers (<i>N</i> = 5,202) in the eight leading IS journals. Machine-learning-based classification determined that only 7.0% of the papers manifested any clear form of knowledge-contestation, such as falsification, in the approach or findings presented. In light of this, we call on IS researchers to increase the falsification and knowledge-contestation in their research, to nurture more valid theories, methods, and practices, thereby achieving greater societal impact. We present two suitable IS research designs accordingly: knowledge-contesting comparisons and knowledge-contesting replications. We also discuss how these designs, exemplifying opportunities to increase the number of knowledge-contesting studies in the field, can be applied in both positivist and interpretivist research epistemology.
DOI: 10.6084/m9.figshare.11090708
title: spss data20191113_전체.sav

description: My data is data of donors and recipients who have undergone kidney transplantation from deceased donors in KOTRY registry in Korea. The purpose of this study is to compare the results of renal transplantation between elderly deceased donors over 60 years old and donors below 60 years old.
DOI: 10.6084/m9.figshare.11088614
title: data.zip

description: The data uploaded explaining how we calculate geometric and structural fractal dimension with the corresponding road data of Hong Kong from 1971 to 2011.
DOI: 10.6084/m9.figshare.11086874
title: MZ_0014_002_Neophyllobius_electrus_60x_gnathosoma

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 60X W + DIC
DOI: 10.6084/m9.figshare.11086877
title: MZ_0015_002_Neophyllobius_electrus_60x_opisthosomaventral

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 60X W + DIC
DOI: 10.6084/m9.figshare.11086865
title: MZ_0013_002_Neophyllobius_electrus_40x_ventralparttwo

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11086874.v1
title: MZ_0014_002_Neophyllobius_electrus_60x_gnathosoma

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 60X W + DIC
DOI: 10.6084/m9.figshare.11086877.v1
title: MZ_0015_002_Neophyllobius_electrus_60x_opisthosomaventral

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 60X W + DIC
DOI: 10.6084/m9.figshare.11086862
title: MZ_0012_002_Neophyllobius_electrus_40x_ventralpartone

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11086865.v1
title: MZ_0013_002_Neophyllobius_electrus_40x_ventralparttwo

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11086478
title: Alternative splicing analysis of different growth stages of O. sinensis

description: ASprofile (version b-1.0.4, http://ccb.jhu.edu/software/ASprofile/ was used to detect the splice junction sites and provided information about boundaries and combinations of different exons in a transcript, and then total splice junction sites of the same gene were used to distinguish the type of its alternative splicing (AS) event. Using rMATs (version 4.0.3, http://rnaseq-mats.sourceforge.net/), the number of differentsplicing events (DASs) and different splicing genes (DSGs) were compared between different growth stages and FDR ≤ 0.05 as statistically significant.
DOI: 10.6084/m9.figshare.11086862.v1
title: MZ_0012_002_Neophyllobius_electrus_40x_ventralpartone

description: <b>Species:</b> <i>Neophyllobius electrus</i> Zmudzinski<b>Source:</b> Baltic amber<b>Deposition: </b>Senckenberg Museum of Natural History Görlitz (SMNG) in Germany, Sammlung Oribatida, under the collection number 07/36290–78<b>Author's catalog number:</b> MZ_XXXX_002_Neophyllobius_electrus_XXx_XXX_info<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics: </b>CFI Apochromat NIR 40X W + DIC
DOI: 10.6084/m9.figshare.11086454
title: DATA_HTS (2).zip

description: The data is from in-depth interviews with HIV positive men and HIV testing providers. The data describes motivations and facilitators for HIV testing and other issues around access to care for HIV positive persons.<br>
DOI: 10.6084/m9.figshare.11086454.v1
title: DATA_HTS (2).zip

description: The data is from in-depth interviews with HIV positive men and HIV testing providers. The data describes motivations and facilitators for HIV testing and other issues around access to care for HIV positive persons.<br>
DOI: 10.6084/m9.figshare.11086391
title: MOESM6 of A genomic survey of transposable elements in the choanoflagellate Salpingoeca rosetta reveals selection on codon usage

description: Additional file 6. gypsy-like, copia-like and DNA transposon alignments. All alignments used to create phylogenies and nucleotide diversity values are provided.
DOI: 10.6084/m9.figshare.11086391.v1
title: MOESM6 of A genomic survey of transposable elements in the choanoflagellate Salpingoeca rosetta reveals selection on codon usage

description: Additional file 6. gypsy-like, copia-like and DNA transposon alignments. All alignments used to create phylogenies and nucleotide diversity values are provided.
DOI: 10.6084/m9.figshare.11086379
title: MOESM2 of A genomic survey of transposable elements in the choanoflagellate Salpingoeca rosetta reveals selection on codon usage

description: Additional file 2. Annotated sequences of the 20 families of transposable element characterized in the S. rosetta genome. The full-length sequences for each identified family are presented, along with putative open-reading frames, untranslated regions and flanking repeats. Conceptual translations of encoded proteins are provided.
DOI: 10.6084/m9.figshare.11086379.v1
title: MOESM2 of A genomic survey of transposable elements in the choanoflagellate Salpingoeca rosetta reveals selection on codon usage

description: Additional file 2. Annotated sequences of the 20 families of transposable element characterized in the S. rosetta genome. The full-length sequences for each identified family are presented, along with putative open-reading frames, untranslated regions and flanking repeats. Conceptual translations of encoded proteins are provided.
DOI: 10.6084/m9.figshare.11086373
title: MOESM12 of A genomic survey of transposable elements in the choanoflagellate Salpingoeca rosetta reveals selection on codon usage

description: Additional file 12. Edited TE ORFs used in SMALT analyses. The ORF sequences of the four families presented contained repetitive regions that were excluded when determining gene expression levels.
DOI: 10.6084/m9.figshare.11086373.v1
title: MOESM12 of A genomic survey of transposable elements in the choanoflagellate Salpingoeca rosetta reveals selection on codon usage

description: Additional file 12. Edited TE ORFs used in SMALT analyses. The ORF sequences of the four families presented contained repetitive regions that were excluded when determining gene expression levels.