cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14169740.v1
title: Supplementary Material for: Hyperfunctioning Papillary Thyroid Carcinoma with a <b><i>BRAF</i></b> Mutation: The First Case Report and a Literature Review

description: <b><i>Introduction:</i></b> Hyperfunctioning papillary thyroid carcinoma (PTC) is rare and consequently, little information on its molecular etiology is available. Although <i>BRAF</i> V600E (<i>BRAF</i> c.1799T&gt;A, p.V600E) is a prominent oncogene in PTC, its mutation has not yet been reported in hyperfunctioning PTC. <b><i>Case Presentation:</i></b> Ultrasonography detected a 26-mm nodule in the right lobe of the thyroid gland of a 48-year-old man. Thyroid function tests indicated that he was hyperthyroid with a TSH level of 0.01 mIU/L (reference range: 0.05–5.00) and a free thyroxine level of 23.2 pmol/L (reference range: 11.6–21.9). TSHR autoantibodies were &lt;0.8 IU/L (reference value: &lt;2.0 IU/L). The <sup>99m</sup>Tc thyroid scintigram revealed a round, right-sided focus of tracer uptake by the nodule with a decreased uptake in the remainder of the gland. The patient underwent total thyroidectomy because fine-needle aspiration cytology revealed a malignancy. The histopathological diagnosis was conventional PTC. Subsequent mutational analysis of <i>BRAF</i> (exon 15), <i>TSHR</i> (exons 1–10), <i>GNAS</i> (exons 7–10), <i>EZH1</i> (exon 16), <i>KRAS</i>, <i>NRAS</i>, <i>HRAS</i> (codons 12, 13, and 61), and <i>TERT</i> promoter (C250T and C228T) identified a heterozygous point mutation in <i>BRAF</i> V600E in a tumor tissue sample. In addition, we identified a <i>TSHR</i> D727E polymorphism (<i>TSHR</i> c.2181C&gt;G, p.D727E) in both the tumor and the surrounding normal thyroid tissue. <b><i>Discussion and Conclusions:</i></b> We report a case of hyperfunctioning PTC with a <i>BRAF</i> V600E mutation for the first time. Our literature search yielded 16 cases of hyperfunctioning thyroid carcinoma in which a mutational analysis was conducted. We identified <i>TSHR</i> mutations in 13 of these cases. One case revealed a combination of <i>TSHR</i> and <i>KRAS</i> mutations; the other case revealed a <i>TSHR</i> mutation with a <i>PAX8/PPARG</i> rearrangement. These findings suggest that the concomitant activation of oncogenes (in addition to constitutive activation of the TSHR-cyclic AMP cascade) are associated with the malignant phenotype in hyperfunctioning thyroid nodules.
DOI: 10.17632/rhykmwgbc3
title: External Validation of the Melanoma Institute Australia Sentinel Node Metastasis Risk Prediction Tool Using the National Cancer Database (Supplementary Material)

description: Supplemental Material Figure 1:  A detailed patient selection schema.
Supplemental Material Figure 2:  Pictorial depiction of the freely accessible Melanoma Institute Australia Sentinel Node Metastasis Risk Prediction Tool.
DOI: 10.17632/6xb4j8xtv5
title: Prior infection with an unrelated neurotropic virus exacerbates influenza disease, impairs lung CD8+ T cell responses and promotes generation of brain tissue-resident memory pools

description: Number and frequency of CDR3ab clonotypes within DbNP366+CD8+ and DbPA224+CD8+ T cells detected in the lung and brain of IAV and SFV→IAV infected mice.
DOI: 10.17632/v452tr6wbk
title: The Effect of Foot and Ankle Trauma on the body, Risk Factors and Complications and how to avoid it

description: Ignoring the signs of any disease can make it worse so, it's important to take care of any risk factors for the disease. Foot and ankle trauma represents a significant clinical concern due to its prevalence and the potential for long-term complications cause of the possibility of getting it due to our daily activities or any incorrect movement that cause the injury. An estimated 25% of all injuries treated in emergency departments involve the foot and ankle. This includes fractures, sprains, and soft tissue injuries. This chapter examines the various risk factors associated with foot and ankle injuries, including age, activity level, underlying health conditions, and environmental influences. Common complications arising from these traumas, such as chronic pain, instability, and post-traumatic arthritis, are also explored. Understanding these factors is crucial for improving prevention strategies, optimizing treatment protocols, and enhancing patient outcomes. In this chapter, we focus on the awareness about Risk Factors and Complications of Foot and Ankle Trauma.
DOI: 10.17632/cx8wghpjs3
title: Material Management Key Performance Indicators (KPI) in Military

description: This data enumerates the Key Performance Indicators (KPIs) that are amenable to representation on dashboards. It includes a comprehensive overview of their definitions, the advised types of visual displays and color schemes, and their prioritization through assigned weights derived using the Analytical Hierarchy Process (AHP), a multi-criteria decision-making methodology. Additionally, it delineates whether these KPIs have been chosen for exhibition on the principal Business Intelligence (BI) dashboard and elaborates on their calculation methods as specified.
DOI: 10.6084/m9.figshare.21626348.v1
title: data.zip

description: This dataset was collected from the eastern experimental field of Northeast Agricultural University from July 15 to August 15, 2021. The maize varieties are Huannong 887, Nongken 10, and Zhongdan 909. A total of 278 images of maize northern leaf blight leaves, 263 images of maize northern anthracnose leaves, and 315 images of healthy maize leaves were collected. The original pixels of all image data were 3968 × 2976. To reduce the number of parameters for the construction of the model, the pixels were adjusted to 256 ×256, and all images' data were stored in JPG format.
DOI: 10.17632/fx5k8sx42r
title: Uniaxial compressive strength data for fly ash-based geopolymer

description: The provided dataset is used to establish machine learning models for the uniaxial compressive strength (UCS) of fly ash-based geopolymer (FABG). The UCS dataset consists of 897 samples. Samples in the dataset are compiled from published studies.
DOI: 10.17632/dc4tygdnw9
title: Remote teachers Intention for Educational Research

description: This data set examines the interplay between four factors that can possibly explain remote teachers’ intentions to utilize educational research for professional development purposes in remote schools in Greece. These factors are Research Intention, Professional Isolation,  Research Knowledge and Research Skills.
DOI: 10.21233/cqjd-hc58
title: Tangra Yumco (Spring) ostracode surface sample dataset

description: Raw data for the Tangra Yumco (Spring) ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/6grfnrbsh4
title: data_wind_magnitud_direction

description: This database offers wind magnitude and direction data at varying heights of 10 and 50 meters, with updates every hour and over the course of a year.
DOI: 10.17632/c4s6j94546
title: Student Grade Data: Grit

description: Estimating Student Fixed Effects in Explaining Grade Outcomes: The Importance of Grit in Determining Student Performance Grit is a term that has emerged in the literature as a way of describing a person’s persistence over time to overcome challenges and accomplish goals. Past measures of grit have been based on self-reported data. We develop a model of student grit that does not rely on self-reported data by employing a rich data set and fixed effects regression techniques to model student letter grade in a course, a proxy for student learning and success, while controlling for the student’s measured cognitive performance, sociodemographic variables, academic rank, relative high school performance, subject matter of the course, instructor, advisor and an individual student effect, interpreted as grit. We find the individual student effect explains significant variation in student academic performance in the classroom. We also demonstrate a method for predicting student grit using secondary education data. Data represents a cohort of economics majors at a public four-year, full-time selective university located in the midwest. Rows represent a single university course taken by the student. Columns: Grade Grade earned by the student Parent_Work_Income Parent's income, normalized SCHOOL_GPA Student's high school grade point average, normalized ACT_COMPOSITE Student's composite ACT score, normalized STUDENT_RANK Student's college rank when the course was taken (Freshman, Sophomore, etc.) Age Student's age when the course was taken, normalized GENDER_DESC Student's self-identified gender, URM Under-represented minority status Student.22 Student indicators Student.01 Student.36 Student.04 Student.05 Student.23 Student.15 Student.28 Student.27 Student.10 Student.11 Student.12 Student.13 Student.14 Student.30 Student.16 Student.18 Student.31 Student.19 Student.20 Student.03 Student.09 Student.26 Student.21 Student.02 Student.06 Student.32 Student.08 Student.29 Student.07 Student.17 Student.25 Student.33 Student.34 Student.24 Student.35 SubjECON Subject indicators SubjMGT SubjFIN SubjENGL SubjACCT SubjCIS SubjMKT SubjCOMM SubjMATH SubjBIOL SubjBLAW SubjHIST SubjAE SubjPSY SubjMUS SubjELCT SubjPE SubjART SubjPOLS SubjSPAN Instructor.04 Instructor indicators Instructor.08 Instructor.07 Instructor.03 Instructor.16 Instructor.05 Instructor.12 Instructor.02 Instructor.06 Instructor.11 Instructor.13 Instructor.10 Instructor.01 Instructor.14 Instructor.09 Instructor.15 Advisor.02 Advisor indicators Advisor.01 Advisor.04 Advisor.11 Advisor.05 Advisor.09 Advisor.07 Advisor.03 Advisor.06 Advisor.10 Advisor.08 Advisor.12
DOI: 10.17632/whgnf4s4bp
title: cabbage_Hyperspectral_dataset

description: Cabbage crop hyperspectral data was acquired using a terrestrial hyperspectral imaging spectroradiometer.
DOI: 10.17632/dk2zvnj2c3
title: Codes for: Free-ridership in subsidies for company and private electric vehicles.

description: Includes a Stata do-file to estimate the free rider share and the cost-effectiveness of Germany's subsidy program for electric vehicles using high-dimensional vehicle registration panel data from 2014 to 2021. Additionally, an Excel file is provided, which contains the processed data at the aggregate level, as well as the descriptive statistics reported in the paper.
DOI: 10.17632/nz3hnmxkyf
title: Impact of producer group membership on the adoption of sustainable cocoa practices

description: Data collection occurred from August to October 2023, targeting farmers who are part of cooperatives and other self-help farmer associations. The study evaluated the impact of these producer groups on the adoption of sustainable crop practices (SCPs) and farm performance, using three distinct groups. A multi-stage sampling technique was employed. Initially, a list of cocoa producer groups in five districts was obtained from district cocoa cooperative officers. Then, a purposive sampling method was used to select three districts from the Ashanti region and two from the Ahafo region, based on input from agricultural extension officers regarding the presence of cooperatives and other farmer associations. The districts included in the study were Agona, Ahafo Ano Southwest, Ahafo Ano Southeast, Asunafo North, and Asunafo South. From these districts, 20 communities were chosen based on the presence of cooperatives and farmer associations. Within each producer group, ten members were randomly selected. After data cleaning and excluding missing data, the analysis included 193 cooperative members and 144 members from other self-help farmer associations.
DOI: 10.17632/5jdkzyfw9p
title: Data for: Chironomid assemblages in surface sediments from 182 lakes across New England and Eastern Canada: Development and validation of a new summer temperature transfer function
DOI: 10.17632/gxcptgc798
title: Exploring farmers’ attitudes and determinants of dairy calf welfare in an expanding dairy sector_Supplemental File_S1

description: Supplemental File (survey) for the manuscript titled "Exploring farmers' attitudes and determinants of dairy calf welfare in an expanding dairy sector"
DOI: 10.17632/vrk25hjhpy
title: Renewable Energy Companies

description: REnewable energy companies
DOI: 10.21233/39qk-nw92
title: Okayama ostracode surface sample dataset

description: Raw data for the Okayama ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.28909724
title: Additional file 22 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 22:  Data File 1. List of genes differentially expressed between D. prolongata males and D. prolongata females.
DOI: 10.6084/m9.figshare.28909724.v1
title: Additional file 22 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 22:  Data File 1. List of genes differentially expressed between D. prolongata males and D. prolongata females.
DOI: 10.6084/m9.figshare.28909727
title: Additional file 23 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 23:  Data File 2. List of genes differentially expressed between D. prolongata males and D. carrolli males.
DOI: 10.6084/m9.figshare.28909727.v1
title: Additional file 23 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 23:  Data File 2. List of genes differentially expressed between D. prolongata males and D. carrolli males.
DOI: 10.6084/m9.figshare.28909730
title: Additional file 24 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 24:  Data File 3. List of genes differentially expressed between D. carrolli males and D. carrolli females.
DOI: 10.6084/m9.figshare.28909730.v1
title: Additional file 24 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 24:  Data File 3. List of genes differentially expressed between D. carrolli males and D. carrolli females.
DOI: 10.6084/m9.figshare.28909733
title: Additional file 25 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 25:  Data File 4. List of genes differentially expressed between D. prolongata females andD. carrolli females.
DOI: 10.6084/m9.figshare.28909733.v1
title: Additional file 25 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 25:  Data File 4. List of genes differentially expressed between D. prolongata females andD. carrolli females.
DOI: 10.6084/m9.figshare.28909736
title: Additional file 26 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 26:  Data File 5.  Genes for which the direction or magnitude of male-female (MF) differences in expression levels differs between D. prolongata and D. carrolli.
DOI: 10.6084/m9.figshare.28909736.v1
title: Additional file 26 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 26:  Data File 5.  Genes for which the direction or magnitude of male-female (MF) differences in expression levels differs between D. prolongata and D. carrolli.
DOI: 10.6084/m9.figshare.28909739
title: Additional file 27 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 27:  Data File 6.  Three one-way comparisons used to identify candidate genes for sex-specific pheromone divergence, showing gene names ordered by union P values.
DOI: 10.6084/m9.figshare.28909739.v1
title: Additional file 27 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 27:  Data File 6.  Three one-way comparisons used to identify candidate genes for sex-specific pheromone divergence, showing gene names ordered by union P values.
DOI: 10.6084/m9.figshare.28909742
title: Additional file 28 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 28:  Data File 7.  Genes expressed in the adult oenocytes of D. melanogaster.
DOI: 10.6084/m9.figshare.28909742.v1
title: Additional file 28 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 28:  Data File 7.  Genes expressed in the adult oenocytes of D. melanogaster.
DOI: 10.17632/bxd4752txg
title: Framing effect_Brzozowicz

description: Does the framing affect the willingness to pay for consumption goods in realistic shopping settings?
DOI: 10.6084/m9.figshare.28909754
title: Additional file 32 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 32:  Data File 8.  Oenocyte-specific marker genes in D. melanogaster, showing log fold changes (oenocytes vs. other tissues) and associated P values.
DOI: 10.6084/m9.figshare.28909757.v1
title: Additional file 33 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 33:  Data File 9.  1kb upstream DNA sequences of the oenocyte marker genes listed in Data File 8.
DOI: 10.6084/m9.figshare.28909754.v1
title: Additional file 32 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 32:  Data File 8.  Oenocyte-specific marker genes in D. melanogaster, showing log fold changes (oenocytes vs. other tissues) and associated P values.
DOI: 10.6084/m9.figshare.28909757
title: Additional file 33 of Regulatory changes in the fatty acid elongase eloF underlie the evolution of sex-specific pheromone profiles in Drosophila prolongata

description: Additional file 33:  Data File 9.  1kb upstream DNA sequences of the oenocyte marker genes listed in Data File 8.
DOI: 10.17632/gpsfjmf59m
title: Collegiate Athlete ACSI Data - 379 Athletes

description: Three psychological skill profiles were found among athletes in each of the three NCAA Divisions. They revealed significant differences in the amounts of psychological practices in Divisions I and II and precompetition anxiety in all three divisions. Findings suggest that psychological practice is related to more adaptive psychological skill profiles.
DOI: 10.17632/h9c46gw9b4
title: A Risk-Informed Approach in Safety Assessment of the Back-End Nuclear Fuel Cycle: Example Reviews/Summaries

description:       An approach in the assessment of nuclear energy safety is summarized based on the author’s previous related research and safety decision made using physics-based risk-informed probabilistic approach.  The system considered includes primarily spent nuclear fuel (SNF) and high-level nuclear waste (HLW) glass in metallic containment systems during the transportation, storage and disposal of SNF and HLW. Materials behavior with time and varying temperatures were investigated in-depth.  Appropriate abstractions of the materials behavior were made to be used for the safety associated with sub-system or total system of transportation, storage and disposal.  The abstractions were probabilistically represented. This summary is presented, to extend the author’s previous work potentially for more advanced technologies.
DOI: 10.17632/589tchmsty
title: Data for: Iterated Greedy methods for the distributed permutation flowshop scheduling problem

description: Online materials for the paper Iterated Greedy methods for the distributed permutation flowshop scheduling problem
DOI: 10.17632/rcm9k9d2by
title: A class of secreted mammalian peptides with potential to expand cell-cell communication - Capped peptide detection

description: Using a hybrid computational-biochemical approach, we have demonstrated the endogenous presence of a large and sequence diverse class of orphan, blood-borne peptides that we call “capped peptides.” Capped peptides are post-translationally modified fragments of classically secreted proteins. They exhibit structural and regulatory characteristics similar to other signaling peptides, including N-terminal pyroglutamylation, C-terminal amidation, and cell type-specific expression. Circulating levels of capped peptides are dynamically regulated by internal physiologic states and external environmental stimuli. The data deposited here are the raw .d files from the initial detection of the capped peptides in mouse and human plasma, along with synthetic standards. We are also including the files from evaluating the peptides level under different physiologic conditions: fasting, high fat diet, LPS injection, aging, and exercise.
DOI: 10.17632/whwgrycztz
title: Maly Javornik Radar

description: The dataset consists of radar reflectivity observations from the 1st of January 2016 until the 30th of June 2019, collected periodically in 5-minute intervals. Data originates from Malý Javorník weather radar station, located in the Carpathian Mountains in Western Slovakia. The dataset was provided by the Slovak Hydrometeorological Institute (SHMU) and used to train the LUPIN model from https://arxiv.org/pdf/2402.10747.

To prevent training the neural network on a biased dataset that contains mostly observations with no precipitation, the dataset contains only the top 63 007 out of the total 355 761 observations. See the linked paper for details.
DOI: 10.17632/3gndhj3t6h
title: Data for: "Self-correction of science: a comparative study of negative citations and post-publication peer review"

description: In order to evaluate negative citations in articles and comments on PubPeer as mechanisms for correcting science, we have built up a corpus of articles associated with retraction or correction notices. As we are interested in citations, we focus here on articles with at least 1 citation according to Scite database, that is 45,811 articles.