DOI: 10.5281/zenodo.1995439
title: Functional diversity of amphibian assemblages along a disturbance gradient

description: <b>Description: </b>Data on amphibian community composition and diet<b>Project: </b>This dataset was collected as part of the following SAFE research project: <b>Functional diversity of amphibian assemblages along a disturbance gradient</b><b>XML metadata: </b>GEMINI compliant metadata for this dataset is available here<b>Files: </b>This consists of 1 file: template_Konopik.xlsx<b>template_Konopik.xlsx</b>This file contains dataset metadata and 5 data tables:<b>Altitude of sites</b> (described in worksheet altitude)Description: Altitude for point sample sitesNumber of fields: 2Number of data rows: 63Fields: <b>name</b>: Sample site (Field type: Location)<b>ele</b>: altitude of sample site (Field type: Numeric)<b>Site details</b> (described in worksheet plots_transects)Description: Site codes plus dates and times of samplingNumber of fields: 8Number of data rows: 679Fields: <b>pt_id</b>: Unique code for each plot x date combination (Field type: ID)<b>type</b>: Type of sample area (Field type: Categorical)<b>date</b>: Date of sample (Field type: Date)<b>start</b>: Time at which sample collection began (Field type: Time)<b>end</b>: Time at which sample collection ended (Field type: Time)<b>area</b>: Identity of the sampling area (Field type: ID)<b>stream</b>: Identity of the stream where sample was collected; 'stream' is nested within 'area' (Field type: Location)<b>plot_transect</b>: Site code; 'plot_transect' is nested within 'stream' (Field type: Location)<b>Community data</b> (described in worksheet frog_community)Description: Frog community samplesNumber of fields: 4Number of data rows: 2428Fields: <b>pt_id</b>: Unique code relating to site and DateTime for the sample; links to pt_id in 'plots_transects' worksheet (Field type: Replicate)<b>frog_id</b>: Species identity (Field type: Taxa)<b>number</b>: Number of individuals observed (Field type: Abundance)<b>no_call</b>: Number of calls recorded (Field type: Abundance)<b>Sampled individuals</b> (described in worksheet diet_samples)Description: Morphometrics and identity of frogs whose gut contents were lavagedNumber of fields: 14Number of data rows: 3887Fields: <b>s_id</b>: Code number for the lavaged gut sample (Field type: ID)<b>code</b>: Code number recorded on sample tube (Field type: ID)<b>frog_id</b>: Identity of the captured individual (Field type: Taxa)<b>stream</b>: Stream the individual was collected from (Field type: Location)<b>date</b>: Date individual was collected (Field type: Date)<b>time</b>: Time individual was collected (Field type: Time)<b>svl</b>: Snout-venter length (Field type: Numeric Trait)<b>gw</b>: Gape width (Field type: Numeric Trait)<b>tibia</b>: Length of the tibia (Field type: Numeric Trait)<b>sex</b>: Sex of the individual (Field type: Categorical Trait)<b>juvenile</b>: Adult or juvenile individual? (Field type: Categorical Trait)<b>empty</b>: Result from stomach flushing (Field type: Categorical)<b>callo</b>: Frog was heard calling before being captured (Field type: Categorical)<b>remarks</b>: Field notes relevant to the individuals (Field type: Comments)<b>Stomach contents</b> (described in worksheet stomach_content)Description: Identity of gut contents from lavaged gut samplesNumber of fields: 10Number of data rows: 17396Fields: <b>sc_id</b>: Unique reference number for each individual (Field type: ID)<b>s_id</b>: Code number for the lavaged gut sample; corresponds to 's_id' on 'diet_samples' worksheet (Field type: ID)<b>frog_id</b>: Predator - frog species whose gut was lavaged (Field type: Taxa)<b>sample_code</b>: Codes related to sample processing (Field type: ID)<b>taxon</b>: Prey - taxa identified from frog gut samples (Field type: Taxa)<b>number</b>: Number of individuals of that taxon within the sample (Field type: Numeric Interaction)<b>description</b>: Field notes related to taxon ID (Field type: Comments)<b>larva</b>: Adult or larva? (Field type: Categorical Trait)<b>reproductive</b>: Reproductive life stage? (Field type: Categorical Trait)<b>volume</b>: the measured/ estimated (or calculated in case of extremely individual rich samples, ants!) volume of this stomach content fraction (Field type: Numeric)<b>Date range: </b>2000-06-21 to 2014-06-25<b>Latitudinal extent: </b>4.5465 to 4.9618<b>Longitudinal extent: </b>115.1379 to 117.8075<b>Taxonomic coverage: </b><br> All taxon names are validated against the GBIF backbone taxonomy. If a dataset uses a synonym, the accepted usage is shown followed by the dataset usage in brackets. Taxa that cannot be validated, including new species and other unknown taxa, morphospecies, functional groups and taxonomic levels not used in the GBIF backbone are shown in square brackets.Animalia<br> - Annelida<br> -  - Clitellata<br> -  -  - [Oligochaeta]<br> - Arthropoda<br> -  - Arachnida<br> -  -  - [Acari]<br> -  -  - Amblypygi<br> -  -  - Araneae<br> -  -  -  - Araneidae<br> -  -  -  -  - <i>Gasteracantha</i><br> -  -  -  - Salticidae<br> -  -  -  - Theraphosidae<br> -  -  - Mesostigmata<br> -  -  -  - Varroidae<br> -  -  - Opiliones<br> -  -  - Pseudoscorpiones<br> -  -  - Scorpiones<br> -  -  - Uropygi<br> -  - Chilopoda<br> -  -  - Geophilomorpha<br> -  -  -  - Geophilidae<br> -  -  - Scutigeromorpha<br> -  -  -  - Scutigeridae<br> -  - Diplopoda<br> -  -  - Glomerida<br> -  -  - Julida<br> -  -  -  - Julidae<br> -  -  - Polydesmida<br> -  - Entognatha<br> -  -  - Collembola<br> -  -  -  - Sminthuridae<br> -  - Insecta<br> -  -  - Archaeognatha<br> -  -  - Blattodea<br> -  -  - Coleoptera<br> -  -  -  - Carabidae<br> -  -  -  -  - [Cicindelinae]<br> -  -  -  - Cerambycidae<br> -  -  -  - Curculionidae<br> -  -  -  - Elateridae<br> -  -  -  - Geotrupidae<br> -  -  -  - Haliplidae<br> -  -  -  - Lampyridae<br> -  -  -  - Lucanidae<br> -  -  -  - Lycidae<br> -  -  -  -  - <i>Duliticola</i><br> -  -  -  - Psephenidae<br> -  -  -  - Scarabaeidae<br> -  -  -  - Scolytidae<br> -  -  -  - Staphylinidae<br> -  -  - Dermaptera<br> -  -  -  - Forficulidae<br> -  -  -  -  - <i>Opisthocosmia</i><br> -  -  - Diptera<br> -  -  -  - Blephariceridae<br> -  -  -  - [Brachycera]<br> -  -  -  - Diopsidae<br> -  -  -  - Drosophilidae<br> -  -  -  -  - [Drosophilinae]<br> -  -  -  - [Nematocera]<br> -  -  - Embioptera<br> -  -  - Ephemeroptera<br> -  -  - Hemiptera<br> -  -  -  - [Cicadomorpha]<br> -  -  -  - Corixidae<br> -  -  -  - Gerridae<br> -  -  -  - [Heteroptera]<br> -  -  -  - [Homoptera]<br> -  -  -  - Membracidae<br> -  -  -  - Naucoridae<br> -  -  -  - Pyrrhocoridae<br> -  -  -  - Reduviidae<br> -  -  -  -  - [Emesinae]<br> -  -  -  - Tessaratomidae<br> -  -  -  - Veliidae<br> -  -  - Hymenoptera<br> -  -  -  - Apidae<br> -  -  -  -  - [Meliponini]<br> -  -  -  - [Apiformes]<br> -  -  -  - Bethylidae<br> -  -  -  - [Chalcidoidea]<br> -  -  -  - Formicidae<br> -  -  -  -  - <i>Acanthomyrmex</i><br> -  -  -  -  -  - [Acanthomyrmex UTNP024]<br> -  -  -  -  -  - [Acanthomyrmex cf. ferox]<br> -  -  -  -  - <i>Acropyga</i><br> -  -  -  -  -  - [Acropyga OK113]<br> -  -  -  -  -  - [Acropyga UTNP034]<br> -  -  -  -  - <i>Aenictus</i><br> -  -  -  -  -  - [Aenictus HH003]<br> -  -  -  -  -  - [Aenictus MB014]<br> -  -  -  -  -  - [Aenictus MB024]<br> -  -  -  -  -  - [Aenictus MB063]<br> -  -  -  -  -  - [Aenictus OK163]<br> -  -  -  -  -  - [Aenictus OK173]<br> -  -  -  -  -  - [Aenictus OK228]<br> -  -  -  -  -  - [Aenictus OK311]<br> -  -  -  -  -  - [Aenictus UTNP008]<br> -  -  -  -  -  - [Aenictus UTNP038]<br> -  -  -  -  -  - [Aenictus UTNP047]<br> -  -  -  -  -  - [Aenictus cf. inflatus]<br> -  -  -  -  - <i>Amblyopone</i><br> -  -  -  -  -  - [Amblyopone CG031]<br> -  -  -  -  - <i>Anochetus</i><br> -  -  -  -  -  - [Anochetus MB018]<br> -  -  -  -  -  - [Anochetus OK029]<br> -  -  -  -  -  - [Anochetus OK072]<br> -  -  -  -  -  - [Anochetus OK093]<br> -  -  -  -  -  - [Anochetus OK135]<br> -  -  -  -  -  - [Anochetus OK162]<br> -  -  -  -  -  - [Anochetus OK221]<br> -  -  -  -  -  - [Anochetus UTNP028]<br> -  -  -  -  -  - [Anochetus UTNP102]<br> -  -  -  -  -  - [Anochetus cf. agilis]<br> -  -  -  -  -  - [Anochetus cf. graeffei]<br> -  -  -  -  -  - [Anochetus cf. rugosus]<br> -  -  -  -  - <i>Anoplolepis</i><br> -  -  -  -  -  - <i>Anoplolepis gracilipes</i><br> -  -  -  -  - <i>Aphaenogaster</i><br> -  -  -  -  -  - [Aphaenogaster OK048]<br> -  -  -  -  -  - [Aphaenogaster cf. feae]<br> -  -  -  -  - <i>Bothriomyrmex</i><br> -  -  -  -  -  - [Bothriomyrmex CG036]<br> -  -  -  -  - <i>Calyptomyrmex</i><br> -  -  -  -  -  - [Calyptomyrmex OK117]<br> -  -  -  -  -  - [Calyptomyrmex OK355]<br> -  -  -  -  - <i>Camponotus</i><br> -  -  -  -  -  - [Camponotus CG010]<br> -  -  -  -  -  - [Camponotus CG030]<br> -  -  -  -  -  - [Camponotus MB003]<br> -  -  -  -  -  - [Camponotus MB015]<br> -  -  -  -  -  - [Camponotus MB017]<br> -  -  -  -  -  - [Camponotus MB034]<br> -  -  -  -  -  - [Camponotus MB036]<br> -  -  -  -  -  - [Camponotus MB066]<br> -  -  -  -  -  - [Camponotus OK007]<br> -  -  -  -  -  - [Camponotus OK008]<br> -  -  -  -  -  - [Camponotus OK009]<br> -  -  -  -  -  - [Camponotus OK054]<br> -  -  -  -  -  - [Camponotus OK067]<br> -  -  -  -  -  - [Camponotus OK076]<br> -  -  -  -  -  - [Camponotus OK078]<br> -  -  -  -  -  - [Camponotus OK082]<br> -  -  -  -  -  - [Camponotus OK127]<br> -  -  -  -  -  - [Camponotus OK165]<br> -  -  -  -  -  - [Camponotus OK198]<br> -  -  -  -  -  - [Camponotus OK309]<br> -  -  -  -  -  - [Camponotus OK319]<br> -  -  -  -  -  - [Camponotus OK335]<br> -  -  -  -  -  - [Camponotus OK339]<br> -  -  -  -  -  - [Camponotus OK349]<br> -  -  -  -  -  - [Camponotus P016]<br> -  -  -  -  -  - [Camponotus UTNP003]<br> -  -  -  -  -  - [Camponotus UTNP030]<br> -  -  -  -  -  - [Camponotus UTNP048]<br> -  -  -  -  -  - [Camponotus UTNP053]<br> -  -  -  -  -  - [Camponotus UTNP103]<br> -  -  -  -  -  - [Camponotus cf. saundersi]<br> -  -  -  -  -  - [Camponotus cf. singularis]<br> -  -  -  -  -  - [Camponotus cf. striatipes]<br> -  -  -  -  -  - <i>Camponotus festinus</i><br> -  -  -  -  -  - <i>Camponotus gigas</i><br> -  -  -  -  - <i>Cardiocondyla</i><br> -  -  -  -  -  - [Cardiocondyla CG009]<br> -  -  -  -  -  - [Cardiocondyla CG018]<br> -  -  -  -  -  - [Cardiocondyla MB059]<br> -  -  -  -  - <i>Carebara</i><br> -  -  -  -  -  - [Carebara HH008]<br> -  -  -  -  -  - [Carebara OK147]<br> -  -  -  -  -  - [Carebara OK184]<br> -  -  -  -  -  - [Carebara OK350]<br> -  -  -  -  -  - [Carebara UTNP035]<br> -  -  -  -  - <i>Cataulacus</i><br> -  -  -  -  -  - [Cataulacus MB038]<br> -  -  -  -  - <i>Centromyrmex</i><br> -  -  -  -  -  - [Centromyrmex CG022]<br> -  -  -  - &en