cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/wymwcttdx4.1
title: Supplementary material

description: In this dataset, we incuded the files regarding the triatomine occurance data, Chagas disease cases data and the Calibration results of the species ENM created on KUENM.
DOI: 10.20350/digitalcsic/15692
title: Implicit hydromechanical upscaling of fractures using a continuum approach [Dataset]

description: Any usage of field data should aquire permission from Geo-Energie Suisse.
description: This dataset includes the input files of the numerical models used in the manuscript for simulating the hydraulic stimulation in the conceptual models as well as the Bedretto model with the executable file of the numerical code (CODE_BRIGHT). Each folder is named after the corresponding model in the manuscript described in the sections 3.1.1 and 3.2.1. In each folder, there is a file with the name of the folder ended as “_gen.dat” which contains the input data of the model, including material properties, initial and boundary conditions and the time intervals. There is also a file ended as “_gri.dat” that includes the information on the mesh. The file “root.dat” includes the name of the model. The file ended as “_bcf.dat” contains injection rate input for Bedretto model. To run the simulation, copy and paste Code_Bright executable file, i.e., “Cb_2021.exe”, in a folder that contains the input files and execute it.
DOI: 10.20350/digitalcsic/15681
title: Digitization of the collection "Manuscritos del Centro de Estudios Históricos" from Tomás Navarro Tomás Library Archive
title: Digitalización de la colección "Manuscritos del Centro de Estudios Históricos" del archivo de la biblioteca Tomás Navarro Tomás

description: Este conjunto de datos está sujeto a una licencia CC BY-SA 4.0
description: [EN] Dataset obtained from the CSIC's Library & Archive Network, which includes the digitalized documents from the collection “Manuscritos” (“Manuscripts”) preserved at the Tomás Navarro Tomás library belonging to the Centro de Ciencias Humanas y Sociales (CCHS) of the CSIC. The now disappeared Centro de Estudios Históricos (CEH) compiled a collection of miscellaneous documents. The complete collection contains 195 documents from private archives that were bound and gathered in codices and dossiers. It comprises mainly notary documents, testaments, property titles, papers related to administration and property management and accounting books, but it also includes work of a historical and literary character. This V1 of the dataset contains the 135 documents that have been digitalized to date.
description: [ES] Dataset procedente del catálogo de la Red de Bibliotecas y Archivos del CSIC que recoge los documentos digitalizados del fondo “Manuscritos” conservados en el Archivo de la biblioteca Tomás Navarro Tomás del Centro de Ciencias Humanas y Sociales (CCHS) del CSIC. Se trata de una colección de documentos misceláneos reunidos durante la etapa del Centro de Estudios Históricos (CEH). La colección al completo está formada por 195 documentos agrupados en legajos y códices encuadernados procedentes de archivos privados. Predomina la documentación de carácter notarial, testamentos y títulos de propiedad, de administración y gestión de propiedades, los libros de cuentas pero también hay obras de carácter histórico y literario. Este dataset contiene los 135 documentos digitalizados hasta el momento.
DOI: 10.20350/digitalcsic/15676
title: Dataset for analytical and numerical solutions of cyclic pore pressure diffusion equation

description: This dataset encompasses the input files associated with diverse analytical and numerical models investigating cyclic pressure diffusion within uniform poroelastic materials. The dataset is organized into two primary folders. The "Analytical Solutions" folder comprises three Python libraries containing the material properties and functions for calculating pressure amplitude at various distances. The "Numerical Solutions" folder contains simulations for both Hydraulic ("01_") and Hydro-Mechanical ("HM_") problems. The simulations are conducted for representative values corresponding to Berea sandstone ("BS_"), Opalinus Clay ("OPA_"), and Westerly granite ("WG_"), considering both monodimensional ("1D") and axisymmetric ("Ax") cases. Within each subfolder, files with the suffix "_gen.dat" provide input data for the model, encompassing material properties, initial and boundary conditions, and time intervals. Correspondingly, files concluding with "_gri.dat" contain information of the mesh employed. The "_bfc.dat" file documents the periodic injection pressure applied for each simulation, while the "root.dat" file specifies the model's nomenclature. To execute a model, launching the executable "Cb_v9_1_3par4.exe" within each ".gid" folder is sufficient.
description: File List: README.txt (this file) \Analytical Solutions\CyclicDiffusion.py \Analytical Solutions\CyclicDiffusion_Adimensional.py \Analytical Solutions\Materials.py \Numerical Solutions\01_BS_1D_g0_1yr.gid \Numerical Solutions\01_BS_Ax_g0_1yr.gid \Numerical Solutions\01_OPA_1D_g0_1w.gid \Numerical Solutions\01_OPA_Ax_g0_1w.gid \Numerical Solutions\01_WG_1D.gid \Numerical Solutions\01_WG_Ax.gid \Numerical Solutions\HM_BS_1D_g0_1yr.gid \Numerical Solutions\HM_BS_Ax_g0_1yr.gid \Numerical Solutions\HM_OPA_1D_g0_1w.gid \Numerical Solutions\HM_OPA_Ax_g0_1w.gid \Numerical Solutions\HM_WG_1D.gid \Numerical Solutions\HM_WG_Ax.gid \Numerical Solutions\Cb_v9_1_3par4.exe
DOI: 10.17632/ddgf9gkw7m.1
title: Numerical terrain analysis of fluvial-marine watersheds of the hotspot island Santiago

description: Numerical terrain analysis constitutes the missing link between the classical descriptive geomorphology and geomorphometry providing landform indices by means of which issues in applied and genetic geosciences can be solved. This method is fully satellite-based and supplemented by ground-truthing dealing with the interior of the positive landforms and the inter-landform sediments.
This approach can successfully be taken prevalently for immature modern landscapes, exemplified by Cenozoic volcanic hotspot islands such as Santiago, the main island of the Cape Verde Archipelago. Corresponding to the scale of observation, a tripartite subdivision is achieved in numerical terrain analysis (1st order regional, 2nd order local, 3rd order outcrop scale). The compositional quantification encompasses mineralogy, sedimentology and isotope geochemistry (δ13C, δ18O, 14C-dating ).
The first order indices allow for a tripartite compartmentalization of the volcanic island into the presumed paleosurface of all volcanic summits within a certain altitude (“Gipfelflur”), the volcanic pediment and the coastal zone. A binary subdivision is conducted in time into an Older Hotspot Island (OHI) with badlands characterized by strong vertical morphotectonic activity and a Younger Hotspot Island (YHI). The summits of the YHI are affected by strong lateral morphotectonic activity even though they are rising higher in the modern-day hinterland than the OHI. This activity resulted in a dissected shield area and a volcanic strike-slip wedge. The first order index called Vertical Sinuosity of Valleys (VeSival) index is crucial and reflects the intensity of relief of the volcanic landscape of the hotspot island.
Among the second order indices, the VaSlAnalti index giving the variation of slope angle as function of altitude is an excellent environmental marker. Its correlation coefficients provide a measure for the homogeneity of volcanogenic, mass wasting, fluvial, and coastal landform series.
Among the third order indices, the QuantGravsitu index (Quantification Gravel situmetry) lends much support to the afore-mentioned environmental markers. It is a meticulous measure of the modality, sharpness and fan width of the orientation of clasts with their data, illustrated in semicircle rose diagrams. It is used to fine-tune volcaniclastic deposits at outcrop scale. 
The current study is a combination of near-surface geoscientific disciplines where exogeneous processes shaping the volcanic landscape are used to translate into endogenous processes also applicable to economic geology. The metallogenic comparison of the Canary Islands and the Cape Verde Archipelago is based on terrain analysis and yields a contrasting picture of both alkali-magmatite-carbonatite hotspot provinces regarding their potential for REE-Nb-Ta-Be-Li metal deposits.
DOI: 10.20350/digitalcsic/15668
title: Dataset: Almond, hazelnut, and pistachio skins as feedstuff: in vitro ruminal fermentation and biohydrogenation
DOI: 10.20350/digitalcsic/15665
title: Data on the WeLASER robot carrying out a mission in the experimental fields of the Center for Automation and Robotics (UPM-CSIC)

description: The dataset is made up of 4 files: (1) map.geojson: a GEOJSON file that describes the digital representation of the experimental field where the tests were carried out; (2) mission.geojson: a GEOJSON file describing the geographic coordinates of the planned mission between Building T and Field 3; (3) robot_path.geojson: a GEOJSON file describing the geographic coordinates of the robot performing the mission; (4) RobotLog.txt: a TXT file with the log generated by the robot during the execution of the mission.
description: This database presents the results of the tests developed in the WeLASER experimental farm, setup in the facilities of the Centre for Automation and Robotics (UPM-CSIC). These experiments consisted of autonomous navigation of the WeLASER robot following a complete mission within the farm. This dataset contains the digital representation of the farm, as well as the geographic coordinates that represent the mission. Furthermore, the geographical coordinates that the robot followed during the execution of the mission are also presented, in addition to the log generated by the robot where the different actions and states that the robot performed at each instant of time are were recorded. This for the purpose of promoting transparency, reproducibility, and the sharing of our research findings.
DOI: 10.20350/digitalcsic/15667
title: Optimal wave reflection as mechanism for seagrass self-organization [Dataset]

description: Scripts, figures, raw and processed data.
description: Whenever you use any part of the data (scripts, figures, raw and processed data) described in this README-file, please make sure to correctly refer to this dataset, the manuscript described above and its authors.
description: AVAILABLE SOON.
description: Please, see scripts-figures-raw-processed-data.pdf file.
DOI: 10.20350/digitalcsic/15663
title: Vallcebre Research Catchments Datasets 6

description: 6. CalRotesPlot_Rainfall-AirTemp-RH-SWC-5min_2021-07_2022-07.xlsx The precipitation data (mm), air temperature data (ºC), relative humidity data (%) and Soil Water Content data (cm3.cm-3) at the Cal Rotes Plot (5 min time step) for the period 07-2021-07-2022.
DOI: 10.17632/8528b5xyhd.1
title: High-Resolution Satellite Monitoring of Forest Degradation and Carbon Sequestration in Costa Rica’s Gandoca-Manzanillo Wildlife Refuge

description: The data supporting the findings of this study are available and can be accessed via the Google Earth Engine platform. The Google Earth Engine code used for the calculation of indices, CO₂ removal, forest loss, and other metrics related to this study.The following elements have been shared:

Sentinel-2 and Planet NICFI Satellite Data: The images for January and August 2024 used for NDVI, GNDVI, EVI, SAVI, NDFI calculations.
Google Earth Engine (GEE) Code: The script for calculating satellite-derived vegetation indices, CO₂ absorption, and forest loss, which is available in the repository.
Figures and Python Code: The figures generated using Spyder and Python scripts are also available for reproduction and further analysis.
The datasets used in this study, including the area of interest (Gandoca-Manzanillo Wildlife Refuge), were derived from public satellite data (Sentinel-2 and Planet NICFI) accessible via Google Earth Engine. Raw data can be accessed directly from the corresponding repositories. Supplementary materials, including the scripts and figures.
DOI: 10.20350/digitalcsic/15648
title: SARS-CoV-2 mapped reads and consensus genomes of an intra-patient serially sampled infection

description: [Description of methods used for collection/generation of data] Viral samples were sequenced in the Institute of Biomedicine of Valencia using the ARTIC v3 primer scheme. Libraries were prepared using the Nextera Flex DNA Library Preparation Kit and sequenced on the Illumina MiSeq platform. 2. Methods for processing the data: Reads were processed with the SeqCOVID pipeline for SARS-CoV-2 bioinformatic analysis (https://gitlab.com/fisabio-ngs/sars-cov2-mapping).
description: Mapped reads and consensus genomes derived of 12 SARS-CoV-2 serial samples from a chronically infected patient in Barcelona, Spain, between March 30, 2020 and November 11, 2020. The samples belong to lineage B.1 and were obtained in the Hospital Clínic de Barcelona. Sequencing was performed at the Institute of Biomedicine of Valencia using the ARTIC v3 protocol, the Nextera Flex DNA Library Preparation Kit and the Illumina MiSeq platform. The bioinformatic analysis was done with the SeqCOVID pipeline for SARS-CoV-2 bioinformatic analysis. The dataset has been analyzed with VIPERA, a pipeline that integrates phylogenetic and evolutionary analysis of intrapatient SARS-CoV-2 sequences, allowing the automated detection of serially sampled infections and the identification of evolutionary patterns within the same viral infection.
description: ERR5708628.trim.sort.bam ERR5708640.trim.sort.bam ERR5708657.trim.sort.bam ERR5709045.trim.sort.bam ERR5709055.trim.sort.bam ERR5709318.trim.sort.bam ERR5709345.trim.sort.bam ERR5709354.trim.sort.bam ERR5709379.trim.sort.bam ERR5709385.trim.sort.bam ERR5709420.trim.sort.bam ERR5709463.trim.sort.bam ERR5708628.fa ERR5708640.fa ERR5708657.fa ERR5709045.fa ERR5709055.fa ERR5709318.fa ERR5709345.fa ERR5709354.fa ERR5709379.fa ERR5709385.fa ERR5709420.fa ERR5709463.fa metadata.csv
DOI: 10.20350/digitalcsic/15655
title: Quercus ilex germination

description: Germination data of sterilized and non-sterilized oak (Quercus ilex) seeds on sterilized and non-sterilized oak and pine soils, added with microbial extracts from oak and pine soils, plus a control of distilled water.
DOI: 10.20350/digitalcsic/15647
title: Images and annotations of sugar beet crop in early growth stages (2 - 8 leaves)

description: [Description of methods used for collection/generation of data] The data were acquired using the RGB camera TRI032S-CC RGB from Lucid Vision Labs equipped with the SV- 04514V lens (resolution: 5 MP; FoV: 59.4° × 79°).
description: This dataset consists of a set images of sugar beet fields representing real-world conditions, acquired with medium-high angle perspective, containing four distinct growth stages based on the BBCH notation system. Within each folder are images in .jpg format and matching .txt files, containing the bounding boxes identifying the plants within the image.
description: The dataset is composed of 4 folders, each folder containing a specific crop and growth stage based on the BBCH notation system. Within each folder are images in .jpg files and matching .txt files, which contain the bounding boxes identifying the plants within the image.
DOI: 10.20350/digitalcsic/15646
title: Images and annotations of maize crop in early growth stages (1 - 8 leaves)

description: [Description of methods used for collection/generation of data] The data were acquired using the RGB camera TRI032S-CC RGB from Lucid Vision Labs equipped with the SV- 04514V lens (resolution: 5 MP; FoV: 59.4° × 79°).
description: This dataset consists of a set images of maize fields representing real-world conditions, acquired with medium-high angle perspective, containing five distinct growth stages based on the BBCH notation system. Within each folder are images in .jpg format and matching .txt files, containing the bounding boxes identifying the plants within the image.
description: The dataset is composed of 5 folders, each folder containing a specific growth stage based on the BBCH notation system. Within each folder are images in .jpg files and matching .txt files, which contain the bounding boxes identifying the plants within the image.
DOI: 10.20350/digitalcsic/15644
title: Valverde de Júcar. Iglesia de Sta. María Magdalena. Inscripciones explicativas en un relicario

description: Las inscripciones se encuentran en el lado interior de las dos puertas del relicario, que el Catálogo monumental de la Diócesis de Cuenca (p. 339) describe del siguiente modo: "En el Presbiterio, en su lado Norte, hay una alacena con doble puerta con versículos de la Sagrada Escritura alusivos a las reliquias, como marco de la misma, columnas y frontón de perfecta traza renacentista, pero de yeso". Son cuatro en letra negra sobre fondo blanco con algunos roleos como adorno en la parte inferior: puerta izquierda (A y B), y puerta derecha (C y D). Los textos en latín están tomados de la Biblia, de Salmos (A y B) y del Evangelio de Lucas (C y D). Inéditas.
DOI: 10.20350/digitalcsic/15645
title: Splicing Assays of CHEK2 variants and microdeletions located at exons 8 and 10: identification of splicing regulatory elements

description: [Description of methods used for collection/generation of data] - Bioinformatics: DeepCLIP analysis (https://deepclip-web.compbio.sdu.dk/) - Sanger sequencing - Fluorescent Fragment Analysis.
description: This dataset corresponds to a comprehensive study of the alternatively spliced exons 8 and 10 of the breast cancer susceptibility gene CHEK2. For this purpose, we have used a minigene with exons 6 to 10, where we introduced 12 internal microdeletions of exons 8 and 10 and 87 variants by site-directed mutagenesis that were assayed in MCF-7 cells. We identified three minimal (10,11,15-nt) regions essential for exon recognition. Thirty-eight variants impaired splicing, and 3 of which were classified as pathogenic/likely pathogenic variants according to ACMG/AMP (American College of Medical Genetics and Genomics/Association for Molecular Pathology)-based guidelines, so carrier patients and families may benefit from tailored prevention protocols and personalized therapies.
description: File: DeepCLIP_Predictions_Variants_exons_8_10.xlsx Folder: cDNA_Sequences. Transcript Sequencing: • 176 *.ab1 files of cDNA sequences of the wild type and mutant minigenes. Folder: Fragment_Analysis. Fluorescent Fragment Analysis: • 267 *.fsa files of fluorescent fragment analysis of the wild type and mutant sequences. Folder: Minigenes_Sequences. Sequence files of wild type and mutant constructs (89 *.ab1 files).
DOI: 10.20350/digitalcsic/15643
title: Uclés. Puerta del Agua. Inscripción conmemorativa (1759)

description: Inscripción que forma parte de un escudo situado sobre el arco de la "Puerta del Agua". Únicamente contiene una fecha.
DOI: 10.17632/wydknkk5k2.1
title: lymphoblastic leukemia

description: successfully captured 1776 high-resolution bone marrow images, each with dimensions of 5440×3648 pixels. The camera's physical resolution is perfectly matched to the image dimension, encompassing approximately 17826 cells, we cropped cells into single cell images based on annotations from medical experts.
DOI: 10.20350/digitalcsic/15641
title: Uclés. Monasterio de la Orden de Santiago. Inscripciones en la fachada oriental de la iglesia

description: Son dos inscripciones sobre piedra que se encuentran en la fachada oriental de la iglesia, en dos cartelas de piedra a ambos lados de la puerta, bajo sendas hornacinas. Texto en latín reelaborado a partir de citas bíblicas. la inscripción 1 contiene una reelaboración de 1 Pedro 2:4-5; la inscripción 2 texto de 1 Corintios 3:11. la hierba que ha nacido sobre la piedra impide leer algunas letras, pero se pueden reconocer fácilmente.
DOI: 10.20350/digitalcsic/15642
title: Uclés. Monasterio de la Orden de Santiago. Inscripciones en un cuadro. S. XVIII?

description: Cuadro de gran tamaño con una escena de la batalla de Clavijo. Tiene dos inscripciones: una (Inscripción 2) en el extremo inferior, en latín, con el pasaje de Josué 10:12-13, referido a la batalla de Israel contra los amorreos: el sol y la luna se detuvieron hasta que Israel se vengó de sus enemigos. Situación parecida, según la leyenda, se dio en la batalla de Clavijo, que es la que se representa en esta escena. La Virgen escuchó la súplica de los cristianos y detuvo por unas horas el Sol, consiguiendo con ello los cristianos ganar la batalla a los moros. Ésta es, precisamente, la otra inscripción (Inscripción 1) que encontramos en el cuadro, en una filacteria que ocupa el centro de la escena. En algunos lugares, se venera a la Virgen de Tentudía el mismo día que el apóstol Santiago. El cuadro se encuentra en la nave de la iglesia del Convento, en el lado de la epístola.
DOI: 10.17632/wydknkk5k2.2
title: LLC-2024

description: Lymphocyte Leukemia Image Classification 2024. 1776 high-resolution bone marrow images, each with dimensions of 5440×3648 pixels. The camera's physical resolution is perfectly matched to the image dimension, encompassing approximately 17826 cells, we cropped cells into single cell images based on annotations from medical experts.
DOI: 10.20350/digitalcsic/15640
title: Uclés. Monasterio de la Orden de Santiago. Inscripción explicativa en la fachada

description: Inscripción realizada mediante la perforación en la espada que sostiene en su mano la figura que representa al apóstol Santiago y que corona la fachada sur del convento.
DOI: 10.20350/digitalcsic/15639
title: Uclés. Monasterio de la Orden de Santiago. Inscripción conmemorativa del accidente. 1679

description: Inscripción sobre una cartela de piedra empotrada en el muro, en la fachada occidental del convento. texto en castellano dispuesto en dos columnas en la cartela, con cuatro conchas en los ángulos y una cruz de la Orden de Santiago en el centro. La segunda línea de la columna izquierda presenta algunos daños, que impiden casi completamente la lectura del texto. La inscripción conmemora el accidente que tuvo lugar durante las obras de construcción del patio y ala occidental del convento.
DOI: 10.17632/6fdxbc8h83.1
title: CS paper

description: The paper deals with the challenges presented by in-situ field measurements, stemming from both ambient light contributions and sample fluorescence. We illustrate and demonstrate the potential of SERDS and charge-shifting approaches coupled with SORS technique. Data consists in recorded Raman spectra and Python scripts to analyze them.