cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26670687
title: Additional file 7 of MethScore as a new comprehensive DNA methylation-based value refining the prognosis in acute myeloid leukemia

description: Additional file 7. R script that was used for data analysis—including data filtering and MethScore calculation.
DOI: 10.6084/m9.figshare.26670684
title: Additional file 6 of MethScore as a new comprehensive DNA methylation-based value refining the prognosis in acute myeloid leukemia

description: Additional file 6. List of CpGs (n = 289) with methylation levels significantly affecting the overall survival of TCGA training cohort patients.
DOI: 10.6084/m9.figshare.26670684.v1
title: Additional file 6 of MethScore as a new comprehensive DNA methylation-based value refining the prognosis in acute myeloid leukemia

description: Additional file 6. List of CpGs (n = 289) with methylation levels significantly affecting the overall survival of TCGA training cohort patients.
DOI: 10.6084/m9.figshare.26670687.v1
title: Additional file 7 of MethScore as a new comprehensive DNA methylation-based value refining the prognosis in acute myeloid leukemia

description: Additional file 7. R script that was used for data analysis—including data filtering and MethScore calculation.
DOI: 10.6084/m9.figshare.26670693
title: Additional file 2 of A taxonomic revision of the genus Angelica (Apiaceae) in Taiwan with a new species A. aliensis

description: Additional file 2. Alignment, ML tree, and BI tree files of cpDNA.
DOI: 10.6084/m9.figshare.26670693.v1
title: Additional file 2 of A taxonomic revision of the genus Angelica (Apiaceae) in Taiwan with a new species A. aliensis

description: Additional file 2. Alignment, ML tree, and BI tree files of cpDNA.
DOI: 10.6084/m9.figshare.26670696
title: Additional file 3 of A taxonomic revision of the genus Angelica (Apiaceae) in Taiwan with a new species A. aliensis

description: Additional file 3. Alignment, ML tree, and BI tree files of nrDNA.
DOI: 10.6084/m9.figshare.26670696.v1
title: Additional file 3 of A taxonomic revision of the genus Angelica (Apiaceae) in Taiwan with a new species A. aliensis

description: Additional file 3. Alignment, ML tree, and BI tree files of nrDNA.
DOI: 10.6084/m9.figshare.26670717.v1
title: Additional file 9 of 3D printed non-uniform anthropomorphic phantoms for quantitative SPECT

description: Additional file 9. thyroid2.
DOI: 10.15468/dl.gtnj6k
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Kenya, Indonesia, Colombia)",
 "TaxonKey is Carassius carassius (Linnaeus, 1758)"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067046-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26604688
title: Additional file 1 of Reduced polymorphism of Plasmodium vivax early transcribed membrane protein (PvETRAMP) 11.2

description: Additional file 1. List of P. vivax samples retrieved from Plasmo DB with their IDs.
DOI: 10.6084/m9.figshare.26604688.v1
title: Additional file 1 of Reduced polymorphism of Plasmodium vivax early transcribed membrane protein (PvETRAMP) 11.2

description: Additional file 1. List of P. vivax samples retrieved from Plasmo DB with their IDs.
DOI: 10.6084/m9.figshare.26604697
title: Additional file 4 of Reduced polymorphism of Plasmodium vivax early transcribed membrane protein (PvETRAMP) 11.2

description: Additional file 4: Table S2. Amino acid sequence polymorphisms in P. vivax ETRAMP11.2 protein worldwide.
DOI: 10.6084/m9.figshare.26604697.v1
title: Additional file 4 of Reduced polymorphism of Plasmodium vivax early transcribed membrane protein (PvETRAMP) 11.2

description: Additional file 4: Table S2. Amino acid sequence polymorphisms in P. vivax ETRAMP11.2 protein worldwide.
DOI: 10.5281/zenodo.13152561
title: Molecular Dynamics of Compact and Extended Conformations of alpha-Synuclein Tetramer on Biological Membranes and with Micelles

description: The data contains starting and end structures (in their protein data bank or PDB format) of molecular dynamics (MD) simulations of two conformations of alpha-Synuclein protein tetramer on two different membrane environments (POPS and mixed), and with two different kind of micelles (SDS and mixed).

The tetramer-membrane pdb files are named as kind of tetramer conformation (Compact or Extended) followed by the membrane type (POPS or mixed) and finally followed by whether it is the start/beginning ('s') or end ('e') of MD simulations.

The tetramer-micelle pdb files are named such that the sides of the tetramer in which the two micelles are placed (B for bottom towards the C-termini of tetramer, and S for side towards one of the lateral sides of the tetramer) followed by the type of tetramer (B for broken or compact conformation while E for extended conformation) followed by the type of micelle (SDS or mixed), and finally the start (s) or end (e) of the simulation. For instance, BSB_mixed_s.pdb means that the 'mixed' micelle is placed at the 'bottom' and the 'side' of the broken or compact tetramer at the start (s).
DOI: 10.6084/m9.figshare.26670753
title: Additional file 1 of A novel methodological approach to participant engagement and policy relevance for community-based primary medical care research during the COVID-19 pandemic in Australia and New Zealand

description: Additional file 1: Table S1 and S2. Questions and answer formats for all questionnaires in Australia and New Zealand during the study period. List of all question and answer options for all surveys conducted in Australia and New Zealand relating to this study.
DOI: 10.6084/m9.figshare.26670753.v1
title: Additional file 1 of A novel methodological approach to participant engagement and policy relevance for community-based primary medical care research during the COVID-19 pandemic in Australia and New Zealand

description: Additional file 1: Table S1 and S2. Questions and answer formats for all questionnaires in Australia and New Zealand during the study period. List of all question and answer options for all surveys conducted in Australia and New Zealand relating to this study.
DOI: 10.15468/dl.uqxtyw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.430138 -32.580338, 148.436876 -32.580338, 148.436876 -32.575846, 148.432384 -32.575846, 148.432384 -32.578092, 148.430138 -32.578092, 148.430138 -32.580338)), ((148.430138 -32.580338, 148.427893 -32.580338, 148.427893 -32.582584, 148.430138 -32.582584, 148.430138 -32.580338)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067047-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26670786.v1
title: Additional file 2 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 2: Table S1. Number of interaction eQTLs per expression PC or PIC in blood and brain.
DOI: 10.6084/m9.figshare.26670789
title: Additional file 3 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 3: Table S2. Blood conditional PIC ieQTL summary statistics.
DOI: 10.6084/m9.figshare.26670789.v1
title: Additional file 3 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 3: Table S2. Blood conditional PIC ieQTL summary statistics.
DOI: 10.6084/m9.figshare.26670792
title: Additional file 4 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 4: Table S3. Brain conditional PIC ieQTL summary statistics.
DOI: 10.6084/m9.figshare.26670792.v1
title: Additional file 4 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 4: Table S3. Brain conditional PIC ieQTL summary statistics.
DOI: 10.6084/m9.figshare.26670798.v1
title: Additional file 6 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 6: Table S4. Blood annotation correlations.
DOI: 10.6084/m9.figshare.26670786
title: Additional file 2 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 2: Table S1. Number of interaction eQTLs per expression PC or PIC in blood and brain.
DOI: 10.6084/m9.figshare.26670798
title: Additional file 6 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 6: Table S4. Blood annotation correlations.
DOI: 10.6084/m9.figshare.26670801
title: Additional file 7 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 7: Table S5. Brain annotation correlations.
DOI: 10.6084/m9.figshare.26670801.v1
title: Additional file 7 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 7: Table S5. Brain annotation correlations.
DOI: 10.6084/m9.figshare.26670804
title: Additional file 8 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 8: Table S6. Blood and brain gene expression vs PIC correlations.
DOI: 10.6084/m9.figshare.26670804.v1
title: Additional file 8 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 8: Table S6. Blood and brain gene expression vs PIC correlations.
DOI: 10.6084/m9.figshare.26670807
title: Additional file 9 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 9: Table S7. ToppGene gene list enrichment.
DOI: 10.6084/m9.figshare.26670807.v1
title: Additional file 9 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 9: Table S7. ToppGene gene list enrichment.
DOI: 10.6084/m9.figshare.26670810
title: Additional file 10 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 10: Table S8. Replication of the MetaBrain EUR ieQTLs in AFR samples.
DOI: 10.6084/m9.figshare.26670810.v1
title: Additional file 10 of PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs

description: Additional file 10: Table S8. Replication of the MetaBrain EUR ieQTLs in AFR samples.
DOI: 10.15468/dl.9ssdke
title: Occurrence Download

description: A dataset containing 35805 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carassius gibelio (Bloch, 1782))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 35805 records from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015169-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc24gqs4
title: CCDC 1980366: Experimental Crystal Structure Determination

description: Related Article: Taewon Kang, Hongsik Kim, Sungeun Jeoung, Dohyun Moon, Hoi Ri Moon, Dongwhan Lee|2021|Chemical Science|12|6378|doi:10.1039/D1SC01163D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.mkqedv
title: Occurrence Download

description: A dataset containing 39358 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Psittacula krameri (Scopoli, 1769)"
 ]
}

 The dataset includes 39358 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015171-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5653tv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "FamilyKey is Culicidae",
 "Country is Canada",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015173-241107131044228/datasets/export for details.
DOI: 10.15468/dl.mamke5
title: Occurrence Download

description: A dataset containing 26427 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudoplatystoma magdaleniatum Buitrago-Suárez & Burr, 2007)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 26427 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015172-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.scvm2m
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Beaucarnea olsonii V.Rojas-Piña & L.O.Alvarado"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015174-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5814070
title: Spatially gridded cross-shelf hydrographic sections and monthly climatologies from shipboard survey data collected along the Newport Hydrographic Line, 1997-2021

description: This data set, described in detail in Risien et al. (2022), contains Newport Hydrographic Line station data; gridded, cross-shelf hydrographic sections; and derived monthly climatologies for temperature, practical salinity, potential density, spiciness, and dissolved oxygen. It consists of CSV (Comma Separated Values) files (newport_hydrographic_line_station_data.zip) that contain CTD observations collected at the seven hydrographic stations located 1, 3, 5, 10, 15, 20 and 25 nautical miles west of Newport, Oregon between March 1997 and July 2021. Additionally, the data set contains three NetCDF files that follow CF (Climate and Forecast) metadata conventions: newport_hydrographic_line_gridded_sections.nc contains observations gridded to a 0.01o x 1 dbar longitude - pressure grid to create cross-shelf hydrographic sections for each of the five variables for each cruise. newport_hydrographic_line_gridded_section_climatologies.nc contains climatological hydrographic sections, calculated using harmonic analysis over the 24-year period March 1997 to February 2021 and reported here for the middle of each month, and newport_hydrographic_line_gridded_section_coefficients.nc contains the associated linear regression model coefficients for all five variables. From the regression coefficients, users can construct seasonal cycles at any location in the gridded section with a temporal resolution that best suits their specific needs. Finally, this data set includes example MATLAB and R scripts that show how to read the data files, plot cross-shelf hydrographic sections, and calculate daily and monthly climatologies using the regression coefficients.
description: We would like to thank the members of the NHL long term observation program who collected data over the years, especially Leah Feinberg, Julie Keister, Jennifer Menkel, Tracy Shaw, and Samantha Zeman. This work was supported by the NOAA-Fisheries and the Environment Program (FATE), the NOAA-National Marine Fisheries Service Stock Assessment Improvement Program (SAIP), the NOAA-Fisheries Biological Opinion (BiOp), the Global Ocean Ecosystems Dynamics Program (GLOBEC), the Comparative Analysis of Marine Ecosystem Organization (CAMEO; NA09NMF4720182), the Bonneville Power Administration (BPA; 1998-014-00), and NOAA's Climate Program Office, Climate Monitoring Program grant NA17OAR4310154.
DOI: 10.5281/zenodo.5814071
title: Spatially gridded cross-shelf hydrographic sections and monthly climatologies from shipboard survey data collected along the Newport Hydrographic Line, 1997-2021

description: This data set, described in detail in Risien et al. (2022), contains Newport Hydrographic Line station data; gridded, cross-shelf hydrographic sections; and derived monthly climatologies for temperature, practical salinity, potential density, spiciness, and dissolved oxygen. It consists of CSV (Comma Separated Values) files (newport_hydrographic_line_station_data.zip) that contain CTD observations collected at the seven hydrographic stations located 1, 3, 5, 10, 15, 20 and 25 nautical miles west of Newport, Oregon between March 1997 and July 2021. Additionally, the data set contains three NetCDF files that follow CF (Climate and Forecast) metadata conventions: newport_hydrographic_line_gridded_sections.nc contains observations gridded to a 0.01o x 1 dbar longitude - pressure grid to create cross-shelf hydrographic sections for each of the five variables for each cruise. newport_hydrographic_line_gridded_section_climatologies.nc contains climatological hydrographic sections, calculated using harmonic analysis over the 24-year period March 1997 to February 2021 and reported here for the middle of each month, and newport_hydrographic_line_gridded_section_coefficients.nc contains the associated linear regression model coefficients for all five variables. From the regression coefficients, users can construct seasonal cycles at any location in the gridded section with a temporal resolution that best suits their specific needs. Finally, this data set includes example MATLAB and R scripts that show how to read the data files, plot cross-shelf hydrographic sections, and calculate daily and monthly climatologies using the regression coefficients.
description: We would like to thank the members of the NHL long term observation program who collected data over the years, especially Leah Feinberg, Julie Keister, Jennifer Menkel, Tracy Shaw, and Samantha Zeman. This work was supported by the NOAA-Fisheries and the Environment Program (FATE), the NOAA-National Marine Fisheries Service Stock Assessment Improvement Program (SAIP), the NOAA-Fisheries Biological Opinion (BiOp), the Global Ocean Ecosystems Dynamics Program (GLOBEC), the Comparative Analysis of Marine Ecosystem Organization (CAMEO; NA09NMF4720182), the Bonneville Power Administration (BPA; 1998-014-00), and NOAA's Climate Program Office, Climate Monitoring Program grant NA17OAR4310154.
DOI: 10.15468/dl.7pvujp
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Puntioplites bulu (Bleeker, 1851))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 56 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015176-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2d9w22
title: Occurrence Download

description: A dataset containing 704 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is one of (United States of America, Norway)",
 {
 "or" : [
 "Geometry POLYGON((-18.07285 32.63595,48.35151 32.63595,48.35151 78.52532,-18.07285 78.52532,-18.07285 32.63595))",
 "Geometry POLYGON((-145.26396 21.32076,-96.65055 21.32076,-96.65055 61.34299,-145.26396 61.34299,-145.26396 21.32076))"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "MediaType is Image",
 "TaxonKey is Cakile maritima Scop.",
 "Year 1957-2016"
 ]
}

 The dataset includes 704 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015175-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ugk2e4
title: Occurrence Download

description: A dataset containing 2505 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "License is one of (CC0 1.0, CC-BY 4.0)",
 "TaxonKey is Meles meles (Linnaeus, 1758)"
 ]
}

 The dataset includes 2505 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015177-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bn2s2a
title: Occurrence Download

description: A dataset containing 401716 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is ITA.20_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 401716 records from 448 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015024-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qjcq4y
title: Occurrence Download

description: A dataset containing 3161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coptodon zillii (Gervais, 1848))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3161 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015178-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kjjgyn
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Salvelinus fontinalis (Mitchill, 1814)"
 ]
}

 The dataset includes 57 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015179-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.