cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.j8qb4x
title: Occurrence Download

description: A dataset containing 315 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Enyalius Wagler, 1830",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 315 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102082-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xyntq4
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erigeron petroiketes Rech.fil."
 ]
}

 The dataset includes 17 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200410-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nwd3rz
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Philippines",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chromolaena odorata (L.) R.M.King & H.Rob."
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075432-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1bnjhz
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Enyalius bilineatus (Duméril & Bibron, 1837)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 32 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102083-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c3ykjm
title: Occurrence Download

description: A dataset containing 533 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erigeron petrophilus Greene"
 ]
}

 The dataset includes 533 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200411-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hep4wk
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Philippines",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Eichhornia crassipes (Mart.) Solms"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075433-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zoawso
title: Occurrence Download

description: A dataset containing 1589 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haplotrematidae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1589 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102086-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6yunsb
title: Occurrence Download

description: A dataset containing 707 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cinclodes palliatus (Tschudi, 1844)"
 ]
}

 The dataset includes 707 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006205-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdm2nm
title: Occurrence Download

description: A dataset containing 3273 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Turnera ulmifolia L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3273 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025236-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.78w2tc
title: Occurrence Download

description: A dataset containing 326685 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Egretta tricolor (Statius Muller, 1776)"
 ]
}

 The dataset includes 326685 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102088-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7jwacp
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erigeron oxyphyllus Greene"
 ]
}

 The dataset includes 88 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200383-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rptfns
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Mexico",
 "Country is Honduras",
 "Country is Belize",
 "Country is Guatemala",
 "Country is Nicaragua"
 ]
 },
 "Year 1970-2020",
 "CoordinateUncertaintyInMeters 0.0-5000.0",
 "HasCoordinate is true",
 "TaxonKey is Lithobates brownorum (Sanders, 1973)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 74 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075440-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ya4wb
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saimiri cassiquiarensis albigena (Pusch, 1942)"
 ]
}

 The dataset includes 55 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102094-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aurpzf
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erigeron palmeri A.Gray"
 ]
}

 The dataset includes 96 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200391-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uttssd
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epicrates cenchria (Linnaeus, 1758)"
 ]
}

 The dataset includes 197 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102095-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czsy5b
title: Occurrence Download

description: A dataset containing 131004 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 131004 records from 188 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064352-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qftcz3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erigeron pamiricus Botsch. & Kochk."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200393-230224095556074/datasets/export for details.
DOI: 10.15468/dl.3gry5c
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Palicourea fissistipula (Müll.Arg.) C.M.Taylor"
 ]
}

 The dataset includes 13 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178260-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.woz0k2
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Achillea ochroleuca Ehrh."
 ]
}

 The dataset includes 54 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102100-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4ptcn
title: Occurrence Download

description: A dataset containing 800 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Amblyomma americanum Linnaeus, 1758"
 ]
}

 The dataset includes 800 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075452-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4q6d5
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erigeron pallidus Popov"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200387-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0ljfch
title: Occurrence Download

description: A dataset containing 165 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Achillea ageratifolia (Lindl.) Boiss."
 ]
}

 The dataset includes 165 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102103-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w3pu7t
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-70.62122 -32.96443,-70.75305 -33.09706,-70.52454 -33.80106,-69.7511 -33.74261,-69.9884 -32.92755,-70.62122 -32.96443))",
 "HasCoordinate is true",
 "TaxonKey is Liolaemus bellii Gray, 1845",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 36 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075456-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xbd7df
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "GadmGid is FRA.8_1",
 "TaxonKey is Crataegus azarolus L.",
 "Year 2018-2023"
 ]
}

 The dataset includes 59 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200382-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ctjox9
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Achillea tomentosa Pursh"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102104-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10965363
title: TECHNOLOGY OF TEACHING FOREIGN LANGUAGE DIALOGIC SPEECH
DOI: 10.5281/zenodo.10965364
title: TECHNOLOGY OF TEACHING FOREIGN LANGUAGE DIALOGIC SPEECH
DOI: 10.15468/dl.f9tbnq
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "TaxonKey is Rallus tenuirostris",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 47 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075460-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v95k6g
title: Occurrence Download

description: A dataset containing 375 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Metamyriactis panduratus (Nees ex Walp.) G.L.Nesom"
 ]
}

 The dataset includes 375 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200394-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v1qix4
title: Occurrence Download

description: A dataset containing 1718 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Achillea macrophylla L."
 ]
}

 The dataset includes 1718 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102107-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u5r2qq
title: Occurrence Download

description: A dataset containing 3795 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-70.94751 -32.78358,-71.05298 -33.07865,-71.05298 -33.94336,-69.68188 -33.73896,-69.99829 -32.62087,-70.94751 -32.78358))",
 "HasCoordinate is true",
 "TaxonKey is Vultur gryphus Linnaeus, 1758",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3795 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075476-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cyr2tt
title: Occurrence Download

description: A dataset containing 201 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erigeron paolii Gamisans"
 ]
}

 The dataset includes 201 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200395-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p2lg2c
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Achillea grandifolia Friv."
 ]
}

 The dataset includes 108 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102110-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xyxt2h
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nothoscordum ibiramense Ravenna"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178262-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10211305
title: Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending

description: This repository contains the DNA affinity purification sequencing (DAP-seq) data, for two biological replicates, as used in the following manuscript:Yimin Hu, Samuel Schwab, Silvia Deiss, Pedro Escudeiro, Joe D. Joiner, Marcus D. Hartmann, Andrei N. Lupas, Birte Hernandez Alvarez, Vikram Alva, and Remus T. Dame. 'Bacterial Histone HBb from Bdellovibrio Bacteriovorus Compacts DNA by Bending'. bioRxiv, 27 September 2023. https://doi.org/10.1101/2023.02.26.530074.There are four types of data in this repository:

Paired-end FASTQ files, containing the raw Illumina reads (raw_reads folder).
Raw read QC reports, generated by the nf-core/chipseq pipeline (fastqc folder).
BAM files, generated by the nf-core/chipseq pipeline (bam folder).
bigWig files, generated by the nf-core/chipseq pipeline (bigwig folder).
Abstract:Histones are essential for genome compaction and transcription regulation in eukaryotes, where they assemble into octamers to form the nucleosome core. In contrast, archaeal histones assemble into dimers that form hypernucleosomes upon DNA binding. Although histone homologs have recently been identified in bacteria, their DNA-binding characteristics remain largely unexplored. Our study reveals that the bacterial histone HBb is indispensable for the survival of Bdellovibrio bacteriovorus, suggesting critical roles in DNA organization and gene regulation. We also elucidate the crystal structure of the HBb dimer at 1.06 Å resolution and employ various biophysico-chemical approaches to show its ability to bind and compact DNA in a sequence-independent manner. This binding induces DNA bending, similar to that observed with bacterial HU/IHF family proteins. Finally, using DNA affinity purification and sequencing, we reveal that HBb binds along the entire genomic DNA of B. bacteriovorus without sequence specificity. These unique DNA-binding properties of bacterial histones, distinct from their archaeal and eukaryotic counterparts, highlight the diverse roles that histones can play in DNA organization across the domains of life.To whom correspondence should be addressed (E-mail):birte.hernandez@tuebingen.mpg.de, or vikram.alva@tuebingen.mpg.de, or rtdame@chem.leidenuniv.nl
DOI: 10.5281/zenodo.10211306
title: Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending

description: This repository contains the DNA affinity purification sequencing (DAP-seq) data, for two biological replicates, as used in the following manuscript:Yimin Hu, Samuel Schwab, Silvia Deiss, Pedro Escudeiro, Joe D. Joiner, Marcus D. Hartmann, Andrei N. Lupas, Birte Hernandez Alvarez, Vikram Alva, and Remus T. Dame. 'Bacterial Histone HBb from Bdellovibrio Bacteriovorus Compacts DNA by Bending'. bioRxiv, 27 September 2023. https://doi.org/10.1101/2023.02.26.530074.There are four types of data in this repository:

Paired-end FASTQ files, containing the raw Illumina reads (raw_reads folder).
Raw read QC reports, generated by the nf-core/chipseq pipeline (fastqc folder).
BAM files, generated by the nf-core/chipseq pipeline (bam folder).
bigWig files, generated by the nf-core/chipseq pipeline (bigwig folder).
Abstract:Histones are essential for genome compaction and transcription regulation in eukaryotes, where they assemble into octamers to form the nucleosome core. In contrast, archaeal histones assemble into dimers that form hypernucleosomes upon DNA binding. Although histone homologs have recently been identified in bacteria, their DNA-binding characteristics remain largely unexplored. Our study reveals that the bacterial histone HBb is indispensable for the survival of Bdellovibrio bacteriovorus, suggesting critical roles in DNA organization and gene regulation. We also elucidate the crystal structure of the HBb dimer at 1.06 Å resolution and employ various biophysico-chemical approaches to show its ability to bind and compact DNA in a sequence-independent manner. This binding induces DNA bending, similar to that observed with bacterial HU/IHF family proteins. Finally, using DNA affinity purification and sequencing, we reveal that HBb binds along the entire genomic DNA of B. bacteriovorus without sequence specificity. These unique DNA-binding properties of bacterial histones, distinct from their archaeal and eukaryotic counterparts, highlight the diverse roles that histones can play in DNA organization across the domains of life.To whom correspondence should be addressed (E-mail):birte.hernandez@tuebingen.mpg.de, or vikram.alva@tuebingen.mpg.de, or rtdame@chem.leidenuniv.nl
DOI: 10.15468/dl.w8aj2x
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "TaxonKey is Dermochelys coriacea (Vandelli, 1761)"
 ]
}

 The dataset includes 20 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075481-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.egrkgu
title: Occurrence Download

description: A dataset containing 335 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pappochroma pappocromum (Labill.) G.L.Nesom"
 ]
}

 The dataset includes 335 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200396-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.120873
title: NÉCROPOLE THÉBAINE_nu_2008_08892

description: Référence : nu_2008_08892<br />Site : Cheikh Abd el-Gourna<br />Secteur : Chapelle (TT_123 (Amenemhat)); TT_123 (Amenemhat)<br />Type : photographie<br />
DOI: 10.15468/dl.xqua9r
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spigelia amambaiensis Fern.Casas"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0139402-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.120874
title: NÉCROPOLE THÉBAINE_nu_2008_08891

description: Référence : nu_2008_08891<br />Site : Cheikh Abd el-Gourna<br />Secteur : Chapelle (TT_123 (Amenemhat)); TT_123 (Amenemhat)<br />Type : photographie<br />
DOI: 10.15468/dl.2wn9dm
title: Occurrence Download

description: A dataset containing 4479 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Moehringia ciliata (Scop.) Dalla Torre"
 ]
}

 The dataset includes 4479 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042560-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.120875
title: NÉCROPOLE THÉBAINE_nu_2008_08890

description: Référence : nu_2008_08890<br />Site : Cheikh Abd el-Gourna<br />Secteur : Chapelle (TT_123 (Amenemhat)); TT_123 (Amenemhat)<br />Type : photographie<br />