cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7490657
title: Time course of selective attention to face regions in social anxiety: eye-tracking and computational modelling

description: We investigated the time course of selective attention to face regions during judgment of dis/approval by low (LSA) and high (HSA) social anxiety undergraduates (with clinical levels on questionnaire measures). The viewers’ gaze direction was assessed and the stimulus visual saliency of face regions was computed, for video-clips displaying dynamic facial expressions. Social anxiety was related to perception of disapproval from faces with an ambiguous smile (i.e. with non-happy eyes), but not those with congruent happy eyes and a smile. HSA observers selectively looked earlier at the eye region, whereas LSA ones preferentially looked at the smiling mouth. Consistently, gaze allocation was <i>less</i> related to visual saliency of the smile for HSA than for LSA viewers. The attentional bias towards the less salient eye region – thus opposing the automatic capture by the smile – suggests that it is strategically driven in HSA individuals, possibly aimed at detecting negative evaluators.
DOI: 10.6084/m9.figshare.7490657.v1
title: Time course of selective attention to face regions in social anxiety: eye-tracking and computational modelling

description: We investigated the time course of selective attention to face regions during judgment of dis/approval by low (LSA) and high (HSA) social anxiety undergraduates (with clinical levels on questionnaire measures). The viewers’ gaze direction was assessed and the stimulus visual saliency of face regions was computed, for video-clips displaying dynamic facial expressions. Social anxiety was related to perception of disapproval from faces with an ambiguous smile (i.e. with non-happy eyes), but not those with congruent happy eyes and a smile. HSA observers selectively looked earlier at the eye region, whereas LSA ones preferentially looked at the smiling mouth. Consistently, gaze allocation was <i>less</i> related to visual saliency of the smile for HSA than for LSA viewers. The attentional bias towards the less salient eye region – thus opposing the automatic capture by the smile – suggests that it is strategically driven in HSA individuals, possibly aimed at detecting negative evaluators.
DOI: 10.7284/107490
title: Winch data collected during research cruise KNOX13RR using a Markey DUTW-9-11 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490570
title: results 4.15.docx

description: data for us
DOI: 10.6084/m9.figshare.7490600
title: Multidimensional Cross-Recurrence Quantification Analysis (MdCRQA) – A Method for Quantifying Correlation between Multivariate Time-Series

description: In this paper, Multidimensional Cross-Recurrence Quantification Analysis (<i>MdCRQA</i>) is introduced. It is an extension of Multidimensional Recurrence Quantification Analysis (<i>MdRQA</i>), which allows to quantify the (auto-)recurrence properties of a single multidimensional time-series. <i>MdCRQA</i> extends <i>MdRQA</i> to bi-variate cases to allow for the quantification of the co-evolution of two multidimensional time-series. Moreover, it is shown how a Diagonal Cross-Recurrence Profile (<i>DCRP</i>) can be computed from the <i>MdCRQA</i> output that allows to capture time-lagged coupling between two multidimensional time-series. The core concepts of these analyses are described, as well as practical aspects of their application. In the supplementary materials to this paper, implementations of MdCRQA and the DCRP as MatLab- and R-functions are provided.
DOI: 10.6084/m9.figshare.7490600.v1
title: Multidimensional Cross-Recurrence Quantification Analysis (MdCRQA) – A Method for Quantifying Correlation between Multivariate Time-Series

description: In this paper, Multidimensional Cross-Recurrence Quantification Analysis (<i>MdCRQA</i>) is introduced. It is an extension of Multidimensional Recurrence Quantification Analysis (<i>MdRQA</i>), which allows to quantify the (auto-)recurrence properties of a single multidimensional time-series. <i>MdCRQA</i> extends <i>MdRQA</i> to bi-variate cases to allow for the quantification of the co-evolution of two multidimensional time-series. Moreover, it is shown how a Diagonal Cross-Recurrence Profile (<i>DCRP</i>) can be computed from the <i>MdCRQA</i> output that allows to capture time-lagged coupling between two multidimensional time-series. The core concepts of these analyses are described, as well as practical aspects of their application. In the supplementary materials to this paper, implementations of MdCRQA and the DCRP as MatLab- and R-functions are provided.
DOI: 10.7284/107476
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KNOX14RR using a Sea-Bird SBE-911+ instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490549
title: Design Futures Worldbuilding Templates

description: Templates for worldbuilding as part of a design futures summer school
DOI: 10.7284/107474
title: Expendable Probe data collected during research cruise KNOX14RR using a Sippican MK21 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107471
title: GNSS (Global Navigation Satellite System) data collected during research cruise KNOX14RR using a Furuno GP-90D instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490474
title: Large-scale validation of miRNAs by disease association, evolutionary conservation and pathway activity

description: The validation of microRNAs (miRNAs) identified by next generation sequencing involves amplification-free and hybridization-based detection of transcripts as criteria for confirming valid miRNAs. Since respective validation is frequently not performed, miRNA repositories likely still contain a substantial fraction of false positive candidates while true miRNAs are not stored in the repositories yet. Especially if downstream analyses are performed with these candidates (e.g. target or pathway prediction), the results may be misleading. In the present study, we evaluated 558 mature miRNAs from miRBase and 1,709 miRNA candidates from next generation sequencing experiments by amplification-free hybridization and investigated their distributions in patients with various disease conditions. Notably, the most significant miRNAs in diseases are often not contained in the miRBase. However, these candidates are evolutionary highly conserved. From the expression patterns, target gene and pathway analyses and evolutionary conservation analyses, we were able to shed light on the complexity of miRNAs in humans. Our data also highlight that a more thorough validation of miRNAs identified by next generation sequencing is required. The results are available in miRCarta (https://mircarta.cs.uni-saarland.de).
DOI: 10.7284/107472
title: GNSS (Global Navigation Satellite System) data collected during research cruise KNOX14RR using a Ashtech ADU2 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490474.v2
title: Large-scale validation of miRNAs by disease association, evolutionary conservation and pathway activity

description: The validation of microRNAs (miRNAs) identified by next generation sequencing involves amplification-free and hybridization-based detection of transcripts as criteria for confirming valid miRNAs. Since respective validation is frequently not performed, miRNA repositories likely still contain a substantial fraction of false positive candidates while true miRNAs are not stored in the repositories yet. Especially if downstream analyses are performed with these candidates (e.g. target or pathway prediction), the results may be misleading. In the present study, we evaluated 558 mature miRNAs from miRBase and 1,709 miRNA candidates from next generation sequencing experiments by amplification-free hybridization and investigated their distributions in patients with various disease conditions. Notably, the most significant miRNAs in diseases are often not contained in the miRBase. However, these candidates are evolutionary highly conserved. From the expression patterns, target gene and pathway analyses and evolutionary conservation analyses, we were able to shed light on the complexity of miRNAs in humans. Our data also highlight that a more thorough validation of miRNAs identified by next generation sequencing is required. The results are available in miRCarta (https://mircarta.cs.uni-saarland.de).
DOI: 10.6084/m9.figshare.7490474.v1
title: Large-scale validation of miRNAs by disease association, evolutionary conservation and pathway activity

description: The validation of microRNAs (miRNAs) identified by next generation sequencing involves amplification-free and hybridization-based detection of transcripts as criteria for confirming valid miRNAs. Since respective validation is frequently not performed, miRNA repositories likely still contain a substantial fraction of false positive candidates while true miRNAs are not stored in the repositories yet. Especially if downstream analyses are performed with these candidates (e.g. target or pathway prediction), the results may be misleading. In the present study, we evaluated 558 mature miRNAs from miRBase and 1,709 miRNA candidates from next generation sequencing experiments by amplification-free hybridization and investigated their distributions in patients with various disease conditions. Notably, the most significant miRNAs in diseases are often not contained in the miRBase. However, these candidates are evolutionary highly conserved. From the expression patterns, target gene and pathway analyses and evolutionary conservation analyses, we were able to shed light on the complexity of miRNAs in humans. Our data also highlight that a more thorough validation of miRNAs identified by next generation sequencing is required. The results are available in miRCarta (https://mircarta.cs.uni-saarland.de).
DOI: 10.7284/107479
title: Gravimeter data collected during research cruise KNOX14RR using a Bell BGM-3 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17632/r5tfvj35p3.3
title: Data for: Adolescent Aggression and Violent Video Games: The role of moral disengagement and parental rearing patterns

description: Data for: Adolescent Aggression and Violent Video Games: The role of moral disengagement and parental rearing patterns boys=1, girls=2.
DOI: 10.7284/107473
title: Meteorological Station data collected during research cruise KNOX14RR using a SIO MET-System instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107478
title: Multibeam Echosounder data collected during research cruise KNOX14RR using a Kongsberg EM120 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490423
title: Additional file 6: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: Transporter annotations. Excel file with all transporter annotations by all 3 tools for all 27 genomes. (XLS 2134 kb)
DOI: 10.6084/m9.figshare.7490417
title: Additional file 4: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: Genome data. Zip file with the 27 reference genomes in Genbank format, cleaned to include only coding sequences and locus tags. (ZIP 68984 kb)
DOI: 10.6084/m9.figshare.7490420
title: Additional file 5: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: EC annotations. Excel file with all EC annotations by all 4 tools for all 27 genomes. (XLS 3442 kb)
DOI: 10.6084/m9.figshare.7490423.v1
title: Additional file 6: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: Transporter annotations. Excel file with all transporter annotations by all 3 tools for all 27 genomes. (XLS 2134 kb)
DOI: 10.6084/m9.figshare.7490414
title: Additional file 3: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: Substrate ranks. Excel file with all transporter substrate ranks. (XLS 74 kb)
DOI: 10.6084/m9.figshare.7490417.v1
title: Additional file 4: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: Genome data. Zip file with the 27 reference genomes in Genbank format, cleaned to include only coding sequences and locus tags. (ZIP 68984 kb)
DOI: 10.6084/m9.figshare.7490420.v1
title: Additional file 5: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: EC annotations. Excel file with all EC annotations by all 4 tools for all 27 genomes. (XLS 3442 kb)
DOI: 10.7284/107480
title: Singlebeam Echosounder data collected during research cruise KNOX14RR using a Knudsen 320B/R instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490411
title: Additional file 2: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: EC numbers predicted by all 4 tools. Excel file with the EC numbers predicted by all 4 tools in most genomes. (XLS 35 kb)
DOI: 10.6084/m9.figshare.7490414.v1
title: Additional file 3: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: Substrate ranks. Excel file with all transporter substrate ranks. (XLS 74 kb)
DOI: 10.7284/107475
title: Winch data collected during research cruise KNOX14RR using a Markey DUTW-9-11 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490411.v1
title: Additional file 2: of Combining multiple functional annotation tools increases coverage of metabolic annotation

description: EC numbers predicted by all 4 tools. Excel file with the EC numbers predicted by all 4 tools in most genomes. (XLS 35 kb)
DOI: 10.7284/107520
title: Multibeam Echosounder data collected during research cruise KNOX15RR using a Kongsberg EM120 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107526
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KNOX17RR using a Hawaii UHDAS instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107524
title: Expendable Probe data collected during research cruise KNOX17RR using a Sippican MK21 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107521
title: GNSS (Global Navigation Satellite System) data collected during research cruise KNOX17RR using a Furuno GP-90D instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107522
title: GNSS (Global Navigation Satellite System) data collected during research cruise KNOX17RR using a Ashtech ADU2 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107527
title: Gravimeter data collected during research cruise KNOX17RR using a Bell BGM-3 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107523
title: Meteorological Station data collected during research cruise KNOX17RR using a SIO MET-System instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107525
title: Winch data collected during research cruise KNOX17RR using a Markey DUTW-9-11 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107533
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KNOX18RR using a Hawaii UHDAS instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107531
title: Expendable Probe data collected during research cruise KNOX18RR using a Sippican MK21 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107528
title: GNSS (Global Navigation Satellite System) data collected during research cruise KNOX18RR using a Furuno GP-90D instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107529
title: GNSS (Global Navigation Satellite System) data collected during research cruise KNOX18RR using a Ashtech ADU2 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/107535
title: Gravimeter data collected during research cruise KNOX18RR using a Bell BGM-3 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490288
title: Additional file 9: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: List of primers used in this study. (XLSX 21 kb)
DOI: 10.7284/107530
title: Meteorological Station data collected during research cruise KNOX18RR using a SIO MET-System instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490288.v1
title: Additional file 9: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: List of primers used in this study. (XLSX 21 kb)
DOI: 10.7284/107534
title: Multibeam Echosounder data collected during research cruise KNOX18RR using a Kongsberg EM120 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490270
title: Additional file 5: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: Custom script for estimating the number of reads spanning a tandem repeat together with its 20â nt-long flanking regions, considering soft-clipped reads with several partial alignments to the flanks. (SH 2 kb)
DOI: 10.6084/m9.figshare.7490270.v1
title: Additional file 5: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: Custom script for estimating the number of reads spanning a tandem repeat together with its 20â nt-long flanking regions, considering soft-clipped reads with several partial alignments to the flanks. (SH 2 kb)
DOI: 10.7284/107532
title: Winch data collected during research cruise KNOX18RR using a Markey DUTW-9-11 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490252
title: Additional file 1: of Early sofosbuvir-ledipasvir treatment for acute HCV infection induced severe immune thrombocytopenia â a case report

description: Table S1. Laboratory data evolution. (XLSX 11 kb)
DOI: 10.7284/107501
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KNOX19RR using a Sea-Bird SBE-911+ instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490252.v1
title: Additional file 1: of Early sofosbuvir-ledipasvir treatment for acute HCV infection induced severe immune thrombocytopenia â a case report

description: Table S1. Laboratory data evolution. (XLSX 11 kb)
DOI: 10.7284/107499
title: Expendable Probe data collected during research cruise KNOX19RR using a Sippican MK21 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490243
title: Additional file 1: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: Custom script searching for unique capture probes that are closest to the target within a specified distance. (SH 13 kb)
DOI: 10.6084/m9.figshare.7490243.v1
title: Additional file 1: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: Custom script searching for unique capture probes that are closest to the target within a specified distance. (SH 13 kb)
DOI: 10.6084/m9.figshare.7490246
title: Additional file 2: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: SureSelect capture probe design and information on the performance of the different probe combinations per target. (XLSX 1353 kb)
DOI: 10.7284/107496
title: GNSS (Global Navigation Satellite System) data collected during research cruise KNOX19RR using a Furuno GP-90D instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7490237
title: Additional file 13: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: Output data from the linkage analysis in the L084 family with X-linked intellectual disability. (LOG 4 kb)
DOI: 10.6084/m9.figshare.7490246.v1
title: Additional file 2: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: SureSelect capture probe design and information on the performance of the different probe combinations per target. (XLSX 1353 kb)
DOI: 10.6084/m9.figshare.7490237.v1
title: Additional file 13: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: Output data from the linkage analysis in the L084 family with X-linked intellectual disability. (LOG 4 kb)
DOI: 10.6084/m9.figshare.7490228
title: Additional file 12: of Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

description: Output data from the linkage analysis in the L061 family with X-linked intellectual disability. (LOG 13992 kb)
DOI: 10.7284/107497
title: GNSS (Global Navigation Satellite System) data collected during research cruise KNOX19RR using a Ashtech ADU2 instrument system onboard the platform RV Roger Revelle

description: Original (unprocessed) data collected during a Field_expedition