cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.gg5td/1
title: Proactive Evolutionary Algorithms for Dynamic Optimization Problems

description: Presentation slides that outline the three anticipation strategies used in proactive evolutionary algorithms designed for dynamic optimization problems.
DOI: 10.5061/dryad.gr1c5/1
title: Data_maternal_effects
DOI: 10.5061/dryad.m7n7f/1
title: Phytophthora infestans genotypes

description: 21 isolates of Phytophthora infestans were genotyped at 12 microsatellite loci: D13, PinfSSR8, PinfSSR4, PinfSSR11, PinfSSR6a, PinfSSR3, Pi4B, Pi70, Pi63, Pi04, G11 and PinfSSR2. Binary data indicate presence (1) or absence (0) of alleles.
DOI: 10.5061/dryad.m7n7f/2
title: Phytophthora infestans phenotypes

description: 21 isolates of Phytophthora infestans were phenotyped on detached leaflets of the potato cultivar Bintje and the tomato cultivar Marmande.	The following traits were measured on 6 replicate leaflets: latency, lesion size (lesion length/width) and number of sporangia produced per lesion.	The experiment was repeated twice.
DOI: 10.5061/dryad.mb605/11
title: Dataset2b_SI

description: Dataset2b_SI.txt is very similar to Dataset2b_HBD.txt and contains various constants, sample size information, and treatment codes required to run the HBL model. See Dataset2b_HBD.txt description for additional details.
DOI: 10.5061/dryad.mb605/12
title: ModelScript_HBL_SI

description: ModelScript_HBL_SI.txt is the OpenBUGS script file for running the HBL model (ModelCode_HBL_SI.txt), reading the correct data files, and loading the initial values for three MCMC chains (Initials_a … b_S1.txt). Note that the script calls Dataset1_SI.txt and Dataset2a_SI.txt, which are not provided because they are exactly the same as the data files called Dataset1_HBD.txt and Dataset2a_HBD.txt, respectively. In particular, Dataset1_SI.txt can be created by grabbing for following columns (variables) from Dataset1_HBD.txt: Datecode, Min, Veg, Plot, Group, and CorrCO2. Dataset2a_SI.txt can be created by simply making a copy of Dataset2a_HBD.txt.
DOI: 10.5061/dryad.mb605/13
title: ModelCode_HBL_SI

description: ModelCode_HBL_SI.txt is the OpenBUGS model code for implementing the HBL model.
DOI: 10.5061/dryad.mr0v3/2
title: HwangWangPLOScomp.tar

description: Contains R scripts used for the analysis presented in the associated manuscript along with the source files needed to run the scripts.
DOI: 10.5061/dryad.nh427/1
title: Feedingmarks on Dryas octopetala and Bistorta vivipara inside and otside OTCs at Finse, Norway

description: The data is based on field observations in two summer periods. The file consists of 3 datasheets: 1. used in table 1 in publication with feeding marks on Bistorta and Dryas. Feeding index as defined in publications 2. feeding marks on other common plant species 3. precentage of each leaf removed (table 2 in publication).
DOI: 10.5061/dryad.nt461/1
title: Unfiltered hapmap

description: An unfiltered hapmap including all SNPs and individuals from genotyping by sequencing pipeline. "N" or "S" prior to individual number refers to northern or southern mt-haplotype. "12" or "28" after individual refers to acclimation temperature of individual.
DOI: 10.5061/dryad.nt461/2
title: Filtered hapmap

description: Filtered hapmap with 155 individuals and 11,705 SNPs. Data was filtered so that each SNP was found in at least 70% of individuals, and each individual had at least 50% of all SNPs. "N" or "S" prior to individual number refers to northern or southern mt-haplotype. "12" or "28" after individual refers to acclimation temperature of individual.
DOI: 10.5061/dryad.nt461/3
title: Sequence Tags

description: Chromosome and start site of 64bp tags from genotyping by sequencing pipeline.
DOI: 10.5061/dryad.nt461/4
title: NJ_OxPhos_Data

description: OxPhos data for individuals in filtered hapmap. Includes State 2, State 3, Complex I, Complex II, Complex IV and E State.
DOI: 10.5061/dryad.pn35j/1
title: CombinedDataset_Nexusfile

description: data matrix in Nexus format
DOI: 10.5061/dryad.q7k33/1
title: Allele_scores_Ceroxylon_quindiuense_complex

description: These are allele scores (diploid) for populations studied in cited article
DOI: 10.5061/dryad.qk58h/5
title: Appendix E Final (BatData)

description: Rarefaction and extrapolation analysis for bat data
DOI: 10.5061/dryad.qk58h/7
title: Appendix G Final (reference points)

description: Relationship between the phylogenetic diversities of two temporal reference points
DOI: 10.5061/dryad.qk58h/8
title: Appendix H Final (IncidenceData)

description: Rarefaction and extrapolation of abundance-sensitive phylogenetic diversity based on incidence data
DOI: 10.5061/dryad.r4g74/1
title: Female agonistic interactions
DOI: 10.5061/dryad.r4g74/2
title: Male agonistic interactions
DOI: 10.5061/dryad.r4g74/3
title: Female presence grid

description: Lists each date of study period and presence/absence of each adult female. This allows the calculation of relative ranks on each date based on Elo scores.
DOI: 10.5061/dryad.r4g74/4
title: Male presence grid

description: Lists each date of study period and presence/absence of each adult male. This allows the calculation of relative ranks on each date based on Elo scores.
DOI: 10.5061/dryad.s6c7j/1
title: Edaphic_properties_fairy_circles_Ecography

description: Compilation of data that is not publicly available and was utilised in the associated manuscript. Brief notes on each worksheet page explain the origin of data and provide a guide to interpretation. The methods used are documented in the manuscript.
DOI: 10.5061/dryad.sq1v7/1
title: all loggers

description: All logger data derived coordinates
DOI: 10.5061/dryad.sq1v7/10
title: ML6740 V1691 089 recosntructed_000

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/2
title: Cyprus wheatear initial location analysis 8

description: R script of analysis for the paper; split main logger data file into separate logger files as necessary
DOI: 10.5061/dryad.sq1v7/3
title: ML6740 V1691 057 reconstructed

description: Raw geolocator file - last number indicates the logger identity - here it is logger 057
DOI: 10.5061/dryad.sq1v7/4
title: ML6740 V1691 057 reconstructed

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/5
title: ML6740 V1691 057 reconstructed

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/6
title: ML6740 V1691 057 reconstructed_000

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/7
title: ML6740 V1691 089 recosntructed

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/8
title: ML6740 V1691 089 recosntructed

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.17s0s/1
title: sap flux and census data

description: This file includes 30-min and daily data of sap flux for 11 lianas and 10 trees, as well as meteorological variables (precipitation, temperature, vapour pressure deficit and solar radiation) over 1 year period. This also contains census data for lianas and trees rooted in our study plot.
DOI: 10.5061/dryad.1d28m/4
title: Sweet cherry phenology data 1978-2015

description: Sweet cherry phenological data were collected from two networks: flowering and maturity dates for up to 191 reference cultivars, and from 10 sites, were extracted from the French database, coordinated by a French national network of experimentation Centre technique interprofessionnel des fruits et legumes - CTIFL). At the European scale, in the context of the COST Action 1104 (2012-2016; https://www.bordeaux.inra.fr/cherry/), flowering and maturity dates were collected from 14 sites. Recorded years span is 1978 - 2015. Metadata are included in the dataset as a separate spreadsheet.
DOI: 10.5061/dryad.1mj01/1
title: sequence of miRNAs of camellia species  in seed natural drying process

description: Camellia miRNAs related to lipid metabolism
DOI: 10.5061/dryad.245kq/1
title: Arce.et.al_census

description: Census data from 20 bumblebee colonies before and after a 5 week semi field experiment.
DOI: 10.5061/dryad.245kq/2
title: Arce.et.al_forage_freq

description: Total observed returning foragers from a 5 week semi field experiment. Freq = total number of foragers, success = individuals carrying pollen, fail = individuals not carrying pollen
DOI: 10.5061/dryad.245kq/3
title: Arce.et.al_observer1

description: Observations of foraging behaviour from a five week semi-sield experiment. Data comes from Observer 1 who counted the number of bees returning to each colony and removed the pollen from one corbicula from any bee observed carrying pollen.
DOI: 10.5061/dryad.2jf75/1
title: Behavioural assays

description: Results from the behavioural assays on D. melanogaster females on the presence of Sour rot vs D. suzukii larvae on grape, see ReadMe for details.
DOI: 10.5061/dryad.2jf75/2
title: Natural infestation in the field

description: Counting and identification of the individuals which emerged from the bunches collected in Epernay, France. See ReadMe for details.
DOI: 10.5061/dryad.2jf75/3
title: Experimental infections

description: Data from the experimental infections, see ReadMe for details.
DOI: 10.5061/dryad.2jf75/4
title: Presence of sour rot agents in wild D. suzukii flies

description: Metagenomics results from wild D. suzukii flies captured in the field, after data filtering
DOI: 10.5061/dryad.2s910/1
title: GSD_photo_data_JAE

description: Data set file with sightings records and individual giraffe data
DOI: 10.5061/dryad.2s910/2
title: Appendix1

description: JAGS code for giraffe spatial capture-recapture model
DOI: 10.5061/dryad.31g05/18
title: LIB0153 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/19
title: LIB0184 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/20
title: LIB0147 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/21
title: LIB0157 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/22
title: LIB0177 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/23
title: LIB0181 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/24
title: LIB0210 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/25
title: LIB0180 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.34s86/1
title: 150309_whale1_record

description: This is a compass output from the M20 digital compass/accelerometer chip. It contains timing information and the outputs from those sensors.
DOI: 10.5061/dryad.34s86/2
title: 150309_whale2_record
DOI: 10.5061/dryad.34s86/3
title: 150309_whale3_record
DOI: 10.5061/dryad.34s86/4
title: M20_acoustic_data
DOI: 10.5061/dryad.4271s/1
title: Shamoun-Baranes et al. (2016)

description: This file includes the longitude and latitude data for each of the gulls included in our analyses, re-sampled at a 20 minute interval. Individuals are identified using a unique three digit code (BirdID) and bird-year subsets are each assigned a separate identifier (Subset). In addition to the coordinate data, cumulative distance travelled (CumulativeDistance) and distance from the colony (ColonyDistance) are also provided for each subset.
DOI: 10.5061/dryad.67cq5/1
title: SNPcalling_result_377530

description: We have successfully constructed 30 saker cDNA libraries, and RNA-seq produced a total of 107.56 Gb of clean data . SNP calling with strict filtering resulted in the identification of 377,530 SNPs.
DOI: 10.5061/dryad.6968k/3
title: TickDrag

description: Off-host tick data
DOI: 10.5061/dryad.7kr85/2
title: data analysis and simulations

description: see read me file
DOI: 10.5061/dryad.860ks/1
title: Oxygen consumption and aerobic scope for digestion

description: Oxygen consumption and aerobic scope for digestion at four experimental temperatures in adult newts, Ichthyosaura alpestris.
DOI: 10.5061/dryad.860ks/2
title: Specific dynamic action

description: Oxygen consumption before (0–5 h) and after feeding in newts, Ichthyosaura alpestris, at four temperatures (n = 12 per temperature).
DOI: 10.5061/dryad.860ks/3
title: Preferred body temperatures

description: Preferred body temperatures in hungry and digesting newts, Ichthyosaura alpestris.
DOI: 10.5061/dryad.8902n/1
title: FigS1map
DOI: 10.5061/dryad.8902n/2
title: FigS2lnl
DOI: 10.5061/dryad.8902n/3
title: FigS3mccCarib
DOI: 10.5061/dryad.8902n/4
title: FigS4mccMnlnd
DOI: 10.5061/dryad.8902n/5
title: FigS5mrcCarib
DOI: 10.5061/dryad.8vb83/1
title: Males segment of a prairie vole population in Illinois

description: The data collection was led by Lowell L. Getz and consisted of monthly captures of prairie voles over the period 1972 - 1997. For more details please refer to http://www.life.illinois.edu/getz/index.html . The data contained in data.zip is the part of the data from the overall dataset that was used in the associated paper. Please refer to the ReadMe for an explanation of all columns and files.
DOI: 10.5061/dryad.94d1s/1
title: Sebastes_raw_data

description: Data includes two sub-sets: 1. Data used to study genetic structure of S. mentella (mentella genotypes) and 2. data used for studying introgression (Sebastes genotypes). Biological data are shown in subsequent sheets.
DOI: 10.5061/dryad.964pf/1
title: Janes et al Functional traits predict production rawdata

description: This database includes the description of the study sites together with associated values of macroalgal community production and traits.
DOI: 10.5061/dryad.9b458/1
title: Data from: Bowers & Timberlake-Do rats learn conditional independence?
DOI: 10.5061/dryad.b60c1/1
title: microsatellite dataset

description: Excel file for allele sizes (bp) for 8 microsatellite loci for individual Euproctus platycephalus, sampled in Sardinia, with gender/lifehistory stage (J juvenile, L larva, NK not known).
DOI: 10.5061/dryad.c2df1/1
title: Forest_bird_abundance

description: All bird species recorded within coastal forest fragments
DOI: 10.5061/dryad.c2df1/2
title: Presence_absence_matrix_species

description: Bird species recorded in the matrix that adjoin forest fragments (presence absence)
DOI: 10.5061/dryad.c2df1/3
title: Tree_abundance

description: Tree species recorded within forest fragments
DOI: 10.5061/dryad.c2df1/4
title: sem_input

description: Input variables for structural equation models
DOI: 10.5061/dryad.ct810/1
title: DataScripts

description: Compressed folder with subfolders with raw data, R scripts and results from cluster randomization analysis. Also a README.pdf file.
DOI: 10.5061/dryad.d149b/1
title: data_packet

description: This is a zipped folder that contains the input alignment files for analyses carried out on selected Lecanora s.l. species to document the phylogenetic placement of the new sorediate species Lecanora remota. The new species was originally included within the broad concept of Lepraria friabilis (a species of the southeastern U.S. including low-elevations of the southern Appalachian Mountains), and shown with molecular data to be unrelated. The data file contains 1) the input files for maximum parsimony (MP), maximum likelihood (ML), Bayesian Inference (BI) and sequence distance analyses, and 2) the original alignment before formatting for those analyses.
DOI: 10.5061/dryad.gg5td/2
title: Compressed Sensing for Fast 31P-MRSI of Brain Tumors and 1H-MRSI of Mild Cognitive Impairment in Parkinson’s Disease

description: Presentation slides that explain compressed sensing accelerated phosphorus MR spectroscopic imaging of brain tumors, and preliminary findings in proton MR spectroscopic imaging of Parkinson's disease with mild cognitive impairment.
DOI: 10.5061/dryad.mb605/14
title: Initials_a_SI

description: Initials_a_S1.txt contains initial (starting) values for parameters in the HBL model, for chain 1.
DOI: 10.5061/dryad.mb605/15
title: Initials_b_SI

description: Initials_b_S1.txt contains initial (starting) values for parameters in the HBL model, for chain 2.
DOI: 10.5061/dryad.mb605/16
title: Initials_c_SI

description: Initials_c_S1.txt contains initial (starting) values for parameters in the HBL model, for chain 3.
DOI: 10.5061/dryad.mm820/1
title: Table A1
DOI: 10.5061/dryad.mm820/2
title: Table A2
DOI: 10.5061/dryad.mm820/3
title: Table A3
DOI: 10.5061/dryad.n7b2q/1
title: Lugon_etal_DungBeetles
DOI: 10.5061/dryad.n7b2q/2
title: Lugon_etal_SecDisp
DOI: 10.5061/dryad.n7b2q/3
title: Lugon_etal_mortality
DOI: 10.5061/dryad.n7b2q/4
title: Lugon_etal_sde
DOI: 10.5061/dryad.n7b2q/5
title: Lugon_etal_phaseII
DOI: 10.5061/dryad.p12g5/1
title: Lynx_data_dryad

description: Lynx home range overlap estimates and reproduction data files with data descriptions provided for each.
DOI: 10.5061/dryad.ph81h/3
title: Dielectric tensors and refractive indices

description: The data provided are in the form of a human-readable JSON file. The file contains the dielectric tensors and refractive index values for 1,056 inorganic compounds, calculated using Density Functional Perturbation Theory.
DOI: 10.5061/dryad.r140b/1
title: Goldin_Startsev_PALA-05-16-3818-OA-R2_suppl
DOI: 10.5061/dryad.r4g74/5
title: Optimized elo rating R code

description: Commented R code used for  modeling Elo scores, corresponding to models 1-3 in manuscript. Includes code for import of sample data files to allow rerunning of models.
DOI: 10.5061/dryad.r6k64/1
title: Concat_FEB-2016 (ITS 1+2)

description: This is an alignment matrix of ITS sequences of Coreopsideae (Compositae). Three new sequences are new and the other ones were gotten from Genbank. The 5.8 part of ITS was excluded from the alignment.
DOI: 10.5061/dryad.r6k64/2
title: BayConcat FEB (ITS 1-2) con

description: Bayesian consensus tree (50 % majority rule) from the analysis with ITS data of Bidens and closely related outgroups.
DOI: 10.5061/dryad.r6k64/3
title: PAUP 2 Concat_FEB-2016 (ITS 1+2)

description: Phylogram of strict consensus of 1260 most parsimonious trees based on ITS data matrix, showing the relationship of the new species described and closely related groups of Coreopsideae
DOI: 10.5061/dryad.sq1v7/11
title: ML6740 V1691 100 reconstructed

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/12
title: ML6740 V1691 100 reconstructed

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/13
title: ML6740 V1691 100 reconstructed
DOI: 10.5061/dryad.sq1v7/14
title: ML6740 V1691 100 reconstructed_000

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/15
title: ML6740 V1691 107

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/16
title: ML6740 V1691 107

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/17
title: ML6740 V1691 107

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/18
title: ML6740 V1691 107_000

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq1v7/9
title: ML6740 V1691 089 recosntructed

description: Raw geolocator file - last number indicates the logger identity
DOI: 10.5061/dryad.sq651/1
title: All laydate

description: File All laydate:
Year = year
Sp = Species 1 = Marsh tit; 2 = Blue tit; 3 = Great tit; 4 = Pied flycatcher
Reg. = Region 1 = Revinge; 2 = Linnebjer; 3 = Vomb; 4 = Dalby Norreskog; 5 = Frueräften; 6 = Kungsmarken
Temp = Mean ambient temperature for the 30 d preceding the mean laying date for each species and year
Date = Laying of the first egg in a clutch; 1 = 1 April
Anno = Year since the first year in the study; 1 = 1969
DOI: 10.17632/c8tg89hrbr.1
title: Centrality Over Time of CJEU Decisions

description: Included is the data and the script used in the study published in Mattias Derlén & Johan Lindholm, 'Measuring Centrality in Legal Citation Networks – A Case Study of the HITS and PageRank Algorithms', Journal of International Economic Law (2017). The dataset contains all 38,261 citations made by the CJEU in its 8,891 decisions issued between 1954 and May 2011 to its own previous case law (edgelist.csv). Included is also the script for R (3.3.1) that we used to calculate the centrality of individual decisions over time. The script includes the code for calculating HubRank, a new centrality measurement introduced in the article.
DOI: 10.5061/dryad.0ds20/1
title: Zimmerman B cell data archive

description: Sheet one contains data for the phagocytic assay. Sheet two contains data from the ELISpot.
DOI: 10.5061/dryad.1p3s4/1
title: DOV fish and habitat height data ALL 3D Points and Lengths

description: Text file output from EventMeasure including all length and 3D point measurements for each fish, visual score habitat classification. Transect were swum using a stereo diver operated video in the Pilbara region of Western Australia.
DOI: 10.5061/dryad.1p3s4/2
title: Method comparison chain and tape and insitu data

description: Raw values for chain and tape measurements and in situ height measurements recorded for methods comparison.
DOI: 10.5061/dryad.1p3s4/3
title: Methods comparison EM All length and 3D points

description: Text file outputs from EvenMeasure of all lengths and 3D points of habitat height for all transects used in analysis. Transect were swum using a stereo diver operated video in the Pilbara region of Western Australia.
DOI: 10.5061/dryad.218n0/1
title: PAsampling_data

description: This dataset contains data from presence-absence registrations on the permanent plots of the Swedish National Forest Inventory. On each plot, registrations are made for two subplots. The data file is separated into three parts: the first contain information about the first subplot, the second about the second subplot, and the third about the union of the two subplots. Descriptions of the variables are given inside the data file.
DOI: 10.5061/dryad.245kq/4
title: Arce.et.al_observer2

description: Observations of foraging behaviour from a five week semi-sield experiment. Data comes from Observer 2 who photographed each bee returning to each colony, also included is the 2 dimensional size of the pollen load.
DOI: 10.5061/dryad.245kq/5
title: JAE_script_sumbission

description: R script for the analysis of the data from Arce et al.  "Combining realism with control: impact of controlled neonicotinoid exposure on bumblebees in a realistic field setting"
DOI: 10.5061/dryad.2hf40/1
title: FUNECO_605_SerendipitaATP6

description: Sequence data: locus ATP6
DOI: 10.5061/dryad.2hf40/2
title: FUNECO_605_SerendipitaC11488

description: Sequence data: locus C11488
DOI: 10.5061/dryad.2hf40/3
title: FUNECO_605_SerendipitaC11804

description: Sequence data: locus C11804
DOI: 10.5061/dryad.2hf40/4
title: FUNECO_605_SerendipitaC16699

description: Sequence data: locus C16699
DOI: 10.5061/dryad.2hf40/5
title: FUNECO_605_SerendipitaC28586

description: Sequence data: locus C28586
DOI: 10.5061/dryad.31g05/26
title: LIB0183 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/27
title: LIB0176 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/28
title: LIB0155 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench
DOI: 10.5061/dryad.31g05/29
title: LIB0164 de novo assembly

description: List of contigs generated from the de novo assembly in CLC Genomics Workbench