cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0189460.10fu
title: SH0189460.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0189461.10fu
title: SH0189461.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0189462.10fu
title: SH0189462.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0189463.10fu
title: SH0189463.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0189464.10fu
title: SH0189464.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.peff5s
title: Occurrence Download

description: A dataset containing 1182 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation)",
 "Country is United States of America",
 "GadmGid is USA.10_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sus scrofa",
 "Year 2000-2026"
 ]
}

 The dataset includes 1182 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001923-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh0189465.10fu
title: SH0189465.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0189466.10fu
title: SH0189466.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.26691760
title: Additional file 8 of Prediction of metabolites associated with somatic mutations in cancers by using genome-scale metabolic models and mutation data

description: Additional file 8: Dataset S3. Relative quantification data of metabolites from the 17 acute myeloid leukemia samples.
DOI: 10.6084/m9.figshare.26691760.v1
title: Additional file 8 of Prediction of metabolites associated with somatic mutations in cancers by using genome-scale metabolic models and mutation data

description: Additional file 8: Dataset S3. Relative quantification data of metabolites from the 17 acute myeloid leukemia samples.
DOI: 10.6084/m9.figshare.26691763
title: Additional file 9 of Prediction of metabolites associated with somatic mutations in cancers by using genome-scale metabolic models and mutation data

description: Additional file 9: Dataset S4. Information on 21 renal cell carcinoma samples considered in this study.
DOI: 10.6084/m9.figshare.26691763.v1
title: Additional file 9 of Prediction of metabolites associated with somatic mutations in cancers by using genome-scale metabolic models and mutation data

description: Additional file 9: Dataset S4. Information on 21 renal cell carcinoma samples considered in this study.
DOI: 10.6084/m9.figshare.26691766
title: Additional file 10 of Prediction of metabolites associated with somatic mutations in cancers by using genome-scale metabolic models and mutation data

description: Additional file 10: Dataset S5. Relative quantification data of metabolites from the 21 renal cell carcinoma samples.
DOI: 10.6084/m9.figshare.26691766.v1
title: Additional file 10 of Prediction of metabolites associated with somatic mutations in cancers by using genome-scale metabolic models and mutation data

description: Additional file 10: Dataset S5. Relative quantification data of metabolites from the 21 renal cell carcinoma samples.
DOI: 10.6084/m9.figshare.26691769
title: Additional file 11 of Prediction of metabolites associated with somatic mutations in cancers by using genome-scale metabolic models and mutation data

description: Additional file 11: Dataset S6. A list of 14,642 metabolite-gene-pathway sets (MGPs) predicted using Human1 for the PCAWG and TCGA samples that represent 18 cancer types.
DOI: 10.6084/m9.figshare.26691769.v1
title: Additional file 11 of Prediction of metabolites associated with somatic mutations in cancers by using genome-scale metabolic models and mutation data

description: Additional file 11: Dataset S6. A list of 14,642 metabolite-gene-pathway sets (MGPs) predicted using Human1 for the PCAWG and TCGA samples that represent 18 cancer types.
DOI: 10.15468/dl.gtvp3b
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.902376 -32.793689, 147.902376 -32.795935, 147.906867 -32.795935, 147.906867 -32.793689, 147.902376 -32.793689))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067621-240626123714530/datasets/export for details.
DOI: 10.26179/7hkr-mz03
title: Predicting trends in atmospheric CO2 across the Mid-Pleistocene Transition using existing climate archives
DOI: 10.6084/m9.figshare.26612078
title: Additional file 5 of Iguratimod suppresses Tfh cell differentiation in primary Sjögren’s syndrome patients through inhibiting Akt/mTOR/STAT3 signaling

description: Additional file 5: Supplementary Table S5. KEGG pathway gene sets.
DOI: 10.6084/m9.figshare.26612078.v1
title: Additional file 5 of Iguratimod suppresses Tfh cell differentiation in primary Sjögren’s syndrome patients through inhibiting Akt/mTOR/STAT3 signaling

description: Additional file 5: Supplementary Table S5. KEGG pathway gene sets.
DOI: 10.6084/m9.figshare.26573347.v1
title: Additional file 11 of Cell-specific vulnerability to metabolic failure: the crucial role of parvalbumin expressing neurons in creatine transporter deficiency

description: Additional file 11: Table S10. Gene Ontology analysis for cellular component for up- and downregulated genes in major sn-RNAseq clusters.
DOI: 10.6084/m9.figshare.26612126
title: Additional file 1 of A national screening for the prevalence and profile of disability types among Egyptian children aged 6–12 years: a community-based population study

description: Additional file 1: S1. Raw data Disability 6-12 years.
DOI: 10.6084/m9.figshare.26573386
title: Additional file 3 of Opposite and dynamic regulation of the interferon response in metastatic and non-metastatic breast cancer

description: Additional file 2. Correlation between IFN-I induced genes expression.
DOI: 10.6084/m9.figshare.26612126.v1
title: Additional file 1 of A national screening for the prevalence and profile of disability types among Egyptian children aged 6–12 years: a community-based population study

description: Additional file 1: S1. Raw data Disability 6-12 years.
DOI: 10.6084/m9.figshare.26692948
title: Additional file 5 of The pharyngeal taste organ of a blood-feeding insect functions in food recognition

description: Additional file 5: Table S1. Raw count matrix generated by STAR after mapping trimmed and cleaned reads against the R. prolixus genome. Table S2. Transcripts per kilobase per Million read (TPM) values in the three replicates for all targeted genes. TPM values &gt; 1 are in light blue.
DOI: 10.6084/m9.figshare.26692948.v1
title: Additional file 5 of The pharyngeal taste organ of a blood-feeding insect functions in food recognition

description: Additional file 5: Table S1. Raw count matrix generated by STAR after mapping trimmed and cleaned reads against the R. prolixus genome. Table S2. Transcripts per kilobase per Million read (TPM) values in the three replicates for all targeted genes. TPM values &gt; 1 are in light blue.
DOI: 10.6084/m9.figshare.26573389
title: Additional file 4 of Opposite and dynamic regulation of the interferon response in metastatic and non-metastatic breast cancer

description: Additional file 3. Correlation between cGAS and IFN-I induced genes expression.
DOI: 10.6084/m9.figshare.26612228
title: Additional file 8 of Emergence and influence of sequence bias in evolutionarily malleable, mammalian tandem arrays

description: Additional file 8. List of genomes searched with Tandem ClipR.
DOI: 10.15468/dl.ktvk89
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Spodoptera exigua (Hübner, 1808)",
 "Year 1834-1900"
 ]
}

 The dataset includes 52 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067622-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26612228.v1
title: Additional file 8 of Emergence and influence of sequence bias in evolutionarily malleable, mammalian tandem arrays

description: Additional file 8. List of genomes searched with Tandem ClipR.
DOI: 10.6084/m9.figshare.26573389.v1
title: Additional file 4 of Opposite and dynamic regulation of the interferon response in metastatic and non-metastatic breast cancer

description: Additional file 3. Correlation between cGAS and IFN-I induced genes expression.
DOI: 10.6084/m9.figshare.26612219
title: Additional file 5 of Emergence and influence of sequence bias in evolutionarily malleable, mammalian tandem arrays

description: Additional file 5. Gene-wise data, including isochore assignment, k-means cluster, local sequence characteristics, variant rates.
DOI: 10.6084/m9.figshare.26692960
title: Additional file 1 of Exploring the link between walking and lung cancer risk: a two-stage Mendelian randomization analysis

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.26692960.v1
title: Additional file 1 of Exploring the link between walking and lung cancer risk: a two-stage Mendelian randomization analysis

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.24597767
title: Additional file 1 of Emergence and influence of sequence bias in evolutionarily malleable, mammalian tandem arrays

description: Additional file 1. Isochore calls in the hg38 human genome assembly.
DOI: 10.6084/m9.figshare.26612210
title: Additional file 2 of Emergence and influence of sequence bias in evolutionarily malleable, mammalian tandem arrays

description: Additional file 2. Isochore calls in the hg19 human genome assembly.
DOI: 10.6084/m9.figshare.24597767.v1
title: Additional file 1 of Emergence and influence of sequence bias in evolutionarily malleable, mammalian tandem arrays

description: Additional file 1. Isochore calls in the hg38 human genome assembly.
DOI: 10.6084/m9.figshare.26612303.v1
title: Additional file 3 of A swift expanding trend of extracellular vesicles in spinal cord injury research: a bibliometric analysis

description: Additional file 3: Table S2. Detailed information of all keywords in VoSviewer, arranged in ascending order of clustering and descending order of occurrences.
DOI: 10.6084/m9.figshare.26612312.v1
title: Additional file 3 of Partial gene suppression improves identification of cancer vulnerabilities when CRISPR-Cas9 knockout is pan-lethal

description: Additional file 3: Table S2. Gene dependency classes (pan-dependency, strongly selective dependency, etc.) and the related metrics.
DOI: 10.6084/m9.figshare.26612216.v1
title: Additional file 4 of Emergence and influence of sequence bias in evolutionarily malleable, mammalian tandem arrays

description: Additional file 4. Results of all statistical analyses presented here.
DOI: 10.6084/m9.figshare.26612219.v1
title: Additional file 5 of Emergence and influence of sequence bias in evolutionarily malleable, mammalian tandem arrays

description: Additional file 5. Gene-wise data, including isochore assignment, k-means cluster, local sequence characteristics, variant rates.
DOI: 10.15468/dl.fvwmpf
title: Occurrence Download

description: A dataset containing 1431 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Ferocactus histrix (DC.) G.E.Linds."
 ]
}

 The dataset includes 1431 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067624-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.edte35
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.531819 -32.795935, 147.531819 -32.798181, 147.534065 -32.798181, 147.534065 -32.795935, 147.531819 -32.795935))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067623-240626123714530/datasets/export for details.
DOI: 10.25345/c5nk36h13
title: MassIVE MSV000095607 - GNPS - Linking Ecology, Behavior, and Immunology to Spatio-Temporal Variation in Helminth Transmission - PRJ5
title: Samples of livers from stickleback fish captured from 47 lakes on Vancouver Island, with associated data on parasite infection status, immune traits, diet, and morphology. Untargeted LC-MS/MS acquisition was performed on a Vanquish Flex UHPLC system coupled to an Orbitrap Exploris 240 (Thermo Fisher Scientific, Bremen, Germany). Chromatographic separation was performed on a Kinetex 2.6 um 100 A pore size Polar C18 reversed phase UHPLC column 100 x 2.1 mm (Phenomenex, Torrance, CA).
DOI: 10.6084/m9.figshare.26693026
title: Additional file 9 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 9: Table S8. D0 vs D7 and D0 vs D14 and D0 vs D21 and D0 vs D28 co-expressed genes.
DOI: 10.6084/m9.figshare.26693026.v1
title: Additional file 9 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 9: Table S8. D0 vs D7 and D0 vs D14 and D0 vs D21 and D0 vs D28 co-expressed genes.
DOI: 10.6084/m9.figshare.26693029
title: Additional file 10 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 10: Table S9. D0 vs D14, D21, D28, and D7 vs D14, D21, D28 co-expressed genes.
DOI: 10.6084/m9.figshare.26693029.v1
title: Additional file 10 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 10: Table S9. D0 vs D14, D21, D28, and D7 vs D14, D21, D28 co-expressed genes.
DOI: 10.6084/m9.figshare.26693032.v1
title: Additional file 11 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 11: Table S10. D0 vs D21, D28 and D7 vs D21, D28 and D14 vs D21, D28 co-expressed genes.
DOI: 10.6084/m9.figshare.26693032
title: Additional file 11 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 11: Table S10. D0 vs D21, D28 and D7 vs D21, D28 and D14 vs D21, D28 co-expressed genes.
DOI: 10.6084/m9.figshare.26693035
title: Additional file 12 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 12: Table S11. GO enrichment analysis of 519 genes.
DOI: 10.6084/m9.figshare.26693035.v1
title: Additional file 12 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 12: Table S11. GO enrichment analysis of 519 genes.
DOI: 10.6084/m9.figshare.26693038
title: Additional file 13 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 13: Table S12. GO enrichment analysis of 9 genes.
DOI: 10.6084/m9.figshare.26693038.v1
title: Additional file 13 of Global gene expression profiling of perirenal brown adipose tissue whitening in goat kids reveals novel genes linked to adipose remodeling

description: Additional file 13: Table S12. GO enrichment analysis of 9 genes.
DOI: 10.6084/m9.figshare.26612297
title: Additional file 2 of A swift expanding trend of extracellular vesicles in spinal cord injury research: a bibliometric analysis

description: Additional file 2: Table S1. Details of all 359 exosomes and spinal cord injury research papers.