cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.4hkfae
title: Occurrence Download

description: A dataset containing 2357971 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 {
 "or" : [
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate reprojected",
 "Issue is Country derived from coordinates"
 ]
 },
 "Year 2000-2018",
 "HasCoordinate is true",
 "TaxonKey is Mammalia",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2357971 records from 724 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002152-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-57169
title: Redemption tidings, vol. 38, nos. 1-52, 5 Jan. - 28 Dec. 1962

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.xatukp
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudovanilla ternatensis (J.J.Sm.) Garay"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0097007-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ns75y3
title: Occurrence Download

description: A dataset containing 716 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Machine Observation"
 ]
 },
 "Geometry POLYGON((-108.23481 42.94303,-109.73763 41.63872,-109.68772 40.11108,-110.49279 39.01797,-110.43496 37.68458,-109.2915 37.05706,-108.85268 35.57419,-106.69723 34.93804,-105.29783 35.19872,-105.22722 36.61323,-105.69646 38.50396,-106.84639 39.89698,-106.17768 41.28778,-106.15886 42.77824,-106.97581 43.91493,-108.23481 42.94303))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Month is January",
 "Month is February",
 "Month is March",
 "Month is April",
 "Month is May",
 "Month is June",
 "Month is July",
 "Month is August",
 "Month is September",
 "Month is October",
 "Month is November",
 "Month is December"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Populus tremuloides Michx."
 ]
}

 The dataset includes 716 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0365260-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-57333
title: Redemption tidings, vol. 38, nos. 1-52, 5 Jan. - 28 Dec. 1962

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.dvcnx4
title: Occurrence Download

description: A dataset containing 3726 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Erebidae"
 ]
}

 The dataset includes 3726 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002699-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rf9k27
title: Occurrence Download

description: A dataset containing 1366 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microstegium fasciculatum (L.) Henrard"
 ]
}

 The dataset includes 1366 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040090-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.21351101.v1
title: Additional file 3 of Identification and characteristics of SnRK genes and cold stress-induced expression profiles in Liriodendron chinense

description: Additional file 3: Table S2. Details of the SnRK gene family for rice and Arabidopsis.
DOI: 10.6084/m9.figshare.20499826.v1
title: Additional file 7 of Nutrition or nature: using elementary flux modes to disentangle the complex forces shaping prokaryote pan-genomes

description: Additional file 7: Table S2. Bacterial and archaeal strains used in this study. The Aeromonadaceae strains are highlighted.
DOI: 10.6084/m9.figshare.21351110.v1
title: Additional file 6 of Identification and characteristics of SnRK genes and cold stress-induced expression profiles in Liriodendron chinense

description: Additional file 6: Table S3. The segmental and tandem duplication events of LcSnRKs.
DOI: 10.6084/m9.figshare.20499829.v1
title: Additional file 8 of Nutrition or nature: using elementary flux modes to disentangle the complex forces shaping prokaryote pan-genomes

description: Additional file 8: Table S3. Environment compounds used in this study. Concentrations of 1000 random environments that constitute the environment ball (see Methods). These concentrations are set as upper bounds to the metabolic models of the pan-reactomes.
DOI: 10.6084/m9.figshare.20499832.v1
title: Additional file 9 of Nutrition or nature: using elementary flux modes to disentangle the complex forces shaping prokaryote pan-genomes

description: Additional file 9: Table S4. Environment-driven reaction scores (EDS) for all 46 prokaryote families.
DOI: 10.6084/m9.figshare.21351092.v1
title: Additional file 14 of Identification and characteristics of SnRK genes and cold stress-induced expression profiles in Liriodendron chinense

description: Additional file 14: Table S8. The primers used in the qRT-PCR
DOI: 10.6084/m9.figshare.21351077.v1
title: Additional file 10 of Identification and characteristics of SnRK genes and cold stress-induced expression profiles in Liriodendron chinense

description: Additional file 10: Table S7. Alignment of protein sequences of LcSnRK and AtSnRK family members.
DOI: 10.6084/m9.figshare.21351119
title: Additional file 9 of Identification and characteristics of SnRK genes and cold stress-induced expression profiles in Liriodendron chinense

description: Additional file 9: Table S6. Detailed information of interaction network of LcSnRKs with other proteins.
DOI: 10.6084/m9.figshare.11393532
title: MOESM4 of NaCl-responsive ROS scavenging and energy supply in alkaligrass callus revealed from proteomic analysis

description: Additional file 4: Table S3. Subcellular localization prediction of the NaCl-responsive proteins in the alkaligrass calli.
DOI: 10.6084/m9.figshare.21351113
title: Additional file 7 of Identification and characteristics of SnRK genes and cold stress-induced expression profiles in Liriodendron chinense

description: Additional file 7: Table S4. The Ka/Ks ratios between L.chinenese and Arabidopsis thaliana.
DOI: 10.6084/m9.figshare.21351124.v1
title: Additional file 1 of Gene Identification, expression analysis and molecular docking of ATP sulfurylase in the selenization pathway of Cardamine hupingshanensis

description: Supplementary Figure S1: Multiple sequence alignment of all the ChATPS proteins; Supplementary Table S1: Physicochemical properties of ATPS proteins in C. hupingshanensis. Supplementary Table S2: The gene coding sequences and protein sequences of ChATPS. Supplementary Table S3: Secondary structure analysis of the nine proteins. Supplementary Table S4: Primers used in qRT-PCR analysis for ChATPS. Table S5: The binding energy of each ligand to each protein at the catalytic site (unit: kcal mol-1). Table S6: At the minimum binding energy site of selenate and protein, the binding energy of each ligand and protein (unit: kcal mol-1).
DOI: 10.5281/zenodo.10683761
title: Engineering the Compositional Architecture of Core-Shell Upconverting Lanthanide-Doped Nanoparticles for Optimal Luminescent Donor in Resonance Energy Transfer: The Effects of Energy Migration and Storage

description: Förster Resonance Energy Transfer (FRET) between single molecule donor (D) and acceptor (A) is well understood from fundamental perspective and is widely applied in biology, biotechnology, medical diagnostics and bio-imaging. However, the reliability of molecular FRET measurements can be affected by numerous artefacts which eventually hamper quantitative and reliable analysis, mostly due to issues with the donor and acceptor molecules. Lanthanide doped upconverting nanoparticles (UCNPs) have demonstrated their suitability as alternative donor species. Nevertheless, while they solved most disadvantageous features of organic donor molecules, such as photo-bleaching, spectral cross-excitation and emission bleed-through, the fundamental understanding and practical realizations of bio-assays with UCNP donors remain challenging. Among others, the actual donor ions in individual donor UCNPs are the numerous activator ions randomly distributed in the nanoparticle at various distances to acceptors anchored on the nanoparticle surface. Further, the power dependent, complex energy transfer upconversion and energy migration between sensitizing and activating lanthanide ions within UCNPs complicate the decay based analysis of D-A interaction. In this work, the assessment of designed virtual core-shell nanoparticle (VNP) models led us to the new designs of UCNPs, such as …@Er, Yb@Er, Yb@YbEr, which were experimentally evaluated as donor nanoparticles and compared to the simulations. Moreover, the specific properties of lanthanide-based upconversion motivated us to analyze not only steady-state luminescence and luminescence decay responses of both the UNCP donor and the sensitized acceptor, but also the effects of their luminescence rise kinetics upon RET was discussed in newly proposed disparity measurements. The presented studies help to understand the role of energy-transfer and energy migration between lanthanide ion dopants (due to their concentration and spatial distribution) and how the architecture of core-shell UCNPs affects their performance as FRET donors to organic acceptor dyes.
description: A.P.-W.  and  A.M.K.  contributed  equally  to  this  work.  S.L.  and  T.S.  acknowledge    Business    Finland    for    the    financial    support.    A.K.    acknowledges   financial   support   from   the   National   Science   Centre   Poland   (Grant   No   2021/41/N/ST5/02753).   Calculations   have   been   carried out using resources provided by Wroclaw Centre for Networking and Supercomputing (https://wcss.pl), grant No. 529.
DOI: 10.5281/zenodo.8392747
title: Engineering the Compositional Architecture of Core-Shell Upconverting Lanthanide-Doped Nanoparticles for Optimal Luminescent Donor in Resonance Energy Transfer: The Effects of Energy Migration and Storage

description: Förster Resonance Energy Transfer (FRET) between single molecule donor (D) and acceptor (A) is well understood from fundamental perspective and is widely applied in biology, biotechnology, medical diagnostics and bio-imaging. However, the reliability of molecular FRET measurements can be affected by numerous artefacts which eventually hamper quantitative and reliable analysis, mostly due to issues with the donor and acceptor molecules. Lanthanide doped upconverting nanoparticles (UCNPs) have demonstrated their suitability as alternative donor species. Nevertheless, while they solved most disadvantageous features of organic donor molecules, such as photo-bleaching, spectral cross-excitation and emission bleed-through, the fundamental understanding and practical realizations of bio-assays with UCNP donors remain challenging. Among others, the actual donor ions in individual donor UCNPs are the numerous activator ions randomly distributed in the nanoparticle at various distances to acceptors anchored on the nanoparticle surface. Further, the power dependent, complex energy transfer upconversion and energy migration between sensitizing and activating lanthanide ions within UCNPs complicate the decay based analysis of D-A interaction. In this work, the assessment of designed virtual core-shell nanoparticle (VNP) models led us to the new designs of UCNPs, such as …@Er, Yb@Er, Yb@YbEr, which were experimentally evaluated as donor nanoparticles and compared to the simulations. Moreover, the specific properties of lanthanide-based upconversion motivated us to analyze not only steady-state luminescence and luminescence decay responses of both the UNCP donor and the sensitized acceptor, but also the effects of their luminescence rise kinetics upon RET was discussed in newly proposed disparity measurements. The presented studies help to understand the role of energy-transfer and energy migration between lanthanide ion dopants (due to their concentration and spatial distribution) and how the architecture of core-shell UCNPs affects their performance as FRET donors to organic acceptor dyes.
description: A.P.-W.  and  A.M.K.  contributed  equally  to  this  work.  S.L.  and  T.S.  acknowledge    Business    Finland    for    the    financial    support.    A.K.    acknowledges   financial   support   from   the   National   Science   Centre   Poland   (Grant   No   2021/41/N/ST5/02753).   Calculations   have   been   carried out using resources provided by Wroclaw Centre for Networking and Supercomputing (https://wcss.pl), grant No. 529.
DOI: 10.5281/zenodo.8392748
title: Engineering the Compositional Architecture of Core-Shell Upconverting Lanthanide-Doped Nanoparticles for Optimal Luminescent Donor in Resonance Energy Transfer: The Effects of Energy Migration and Storage

description: Förster Resonance Energy Transfer (FRET) between single molecule donor (D) and acceptor (A) is well understood from fundamental perspective and is widely applied in biology, biotechnology, medical diagnostics and bio-imaging. However, the reliability of molecular FRET measurements can be affected by numerous artefacts which eventually hamper quantitative and reliable analysis, mostly due to issues with the donor and acceptor molecules. Lanthanide doped upconverting nanoparticles (UCNPs) have demonstrated their suitability as alternative donor species. Nevertheless, while they solved most disadvantageous features of organic donor molecules, such as photo-bleaching, spectral cross-excitation and emission bleed-through, the fundamental understanding and practical realizations of bio-assays with UCNP donors remain challenging. Among others, the actual donor ions in individual donor UCNPs are the numerous activator ions randomly distributed in the nanoparticle at various distances to acceptors anchored on the nanoparticle surface. Further, the power dependent, complex energy transfer upconversion and energy migration between sensitizing and activating lanthanide ions within UCNPs complicate the decay based analysis of <strong><em>D</em></strong>-<strong><em>A</em></strong> interaction. In this work, the assessment of designed virtual core-shell nanoparticle (VNP) models led us to the new designs of UCNPs, such as …@Er, Yb@Er, Yb@YbEr, which were experimentally evaluated as donor nanoparticles and compared to the simulations. Moreover, the specific properties of lanthanide-based upconversion motivated us to analyze not only steady-state luminescence and luminescence decay responses of both the UNCP donor and the sensitized acceptor, but also the effects of their luminescence rise kinetics upon RET was discussed in newly proposed disparity measurements. The presented studies help to understand the role of energy-transfer and energy migration between lanthanide ion dopants (due to their concentration and spatial distribution) and how the architecture of core-shell UCNPs affects their performance as FRET donors to organic acceptor dyes.
description: A.P.-W. and A.M.K. contributed equally to this work. S.L. and T.S. acknowledge Business Finland for the financial support. A.K. acknowledges financial support from the National Science Centre Poland (Grant No 2021/41/N/ST5/02753). Calculations have been carried out using resources provided by Wroclaw Centre for Networking and Supercomputing (https://wcss.pl), grant No. 529.
DOI: 10.6084/m9.figshare.21351184.v1
title: Additional file 2 of ELOVL gene family plays a virtual role in response to breeding selection and lipid deposition in different tissues in chicken (Gallus gallus)

description: Additional file 2: Table S2. Effects of 14 candidate SNPs on growth, carcass and meat quality traits.
DOI: 10.6084/m9.figshare.21351116
title: Additional file 8 of Identification and characteristics of SnRK genes and cold stress-induced expression profiles in Liriodendron chinense

description: Additional file 8: Table S5. The Ka/Ks ratios between L.chinenese and Oryza sativa.
DOI: 10.6084/m9.figshare.11393568
title: MOESM1 of Design and evaluation of nano-hydroxyapatite/poly(vinyl alcohol) hydrogels coated with poly(lactic-co-glycolic acid)/nano-hydroxyapatite/poly(vinyl alcohol) scaffolds for cartilage repair

description: Additional file 1: Figure S1. Toluidine blue staining(A) and immunohistochemical staining of type II collagen(B) of chondrocytes; The growth curve of rabbit chondrocytes(C). G represents the cell-generation of rabbit chondrocytes passage number. Figure S2. Western-Blot analysis of Col2 and GAG protein expression and actin expression after co-culturing rabbit chondrocytes with scaffold for 3d,7d,14d. PVA mass fraction of 5wt%(E1), 10wt%(E2), or 15wt%(E3); PLGA of 30wt%; and nano-HA of 5wt% was used for investigation. The control group contained HA: 5wt%, PVA: 15wt% (CG). Figure S3. Results of toluidine blue staining after co-culturing rabbit chondrocytes with scaffold for 3d,7d,14d; PVA mass fraction of 5wt%(E1), 10wt%(E2), or 15wt%(E3); PLGA of 30wt%; and nano-HA of 5wt% were used for investigation. The control group contained HA: 5wt%, PVA: 15wt% (CG). Figure S4. The bottom-emitting image of the double-layer HA/PVA hydrogel coated with PLGA/HA/PVA scaffold. The radius of mold 2 was 10 mm, and that of mold 1 was 7 mm in experimental group one (EG1), 8 mm in experimental group two (EG2), and 9 mm in experimental group three (EG3).
DOI: 10.6084/m9.figshare.21351178
title: Additional file 1 of ELOVL gene family plays a virtual role in response to breeding selection and lipid deposition in different tissues in chicken (Gallus gallus)

description: Additional file 1: Table S1. Association analysis of 51 SNPs in the ELOVL gene family with growth, carcass and meat quality traits in Gushi ×Anka F2 chickens.
DOI: 10.6084/m9.figshare.19778136.v1
title: Additional file 3 of Equations for predicting DXA-measured visceral adipose tissue mass based on BMI or weight in adults

description: Additional file 3.
DOI: 10.6084/m9.figshare.21351184
title: Additional file 2 of ELOVL gene family plays a virtual role in response to breeding selection and lipid deposition in different tissues in chicken (Gallus gallus)

description: Additional file 2: Table S2. Effects of 14 candidate SNPs on growth, carcass and meat quality traits.
DOI: 10.6084/m9.figshare.21351190
title: Additional file 4 of ELOVL gene family plays a virtual role in response to breeding selection and lipid deposition in different tissues in chicken (Gallus gallus)

description: Additional file 4: Table S3. Putative ERE and AP1 element in chicken ELOVL genes promoter.
DOI: 10.18112/openneuro.ds004980.v1.0.0
title: EEG data set for a architectural affordances task
DOI: 10.6084/m9.figshare.21351196
title: Additional file 6 of ELOVL gene family plays a virtual role in response to breeding selection and lipid deposition in different tissues in chicken (Gallus gallus)

description: Additional file 6: Table S4. List of lipids in intramuscular fat correlated with ELOVL3 expression in pectorals.
DOI: 10.6084/m9.figshare.11393622.v1
title: MOESM3 of Protein expression profiles in Meishan and Duroc sows during mid-gestation reveal differences affecting uterine capacity, endometrial receptivity, and the maternalâ€“fetal Interface

description: Additional file 3: Table S3. List of DEPs and functional enrichment analysis results for DEPs at day 49.
DOI: 10.6084/m9.figshare.21351095
title: Additional file 1 of Identification and characteristics of SnRK genes and cold stress-induced expression profiles in Liriodendron chinense

description: Additional file 1: Table S1. Basic protein information of LcSnRK family members.
DOI: 10.6084/m9.figshare.11393634.v1
title: MOESM5 of Protein expression profiles in Meishan and Duroc sows during mid-gestation reveal differences affecting uterine capacity, endometrial receptivity, and the maternalâ€“fetal Interface

description: Additional file 5: Table S5. List of DEPs associated to extracellular vesicular exosome.
DOI: 10.34740/kaggle/ds/4458934
title: 🇵🇭 Ivana Alawi Youtube Influencer Video Comments
DOI: 10.6084/m9.figshare.21351124
title: Additional file 1 of Gene Identification, expression analysis and molecular docking of ATP sulfurylase in the selenization pathway of Cardamine hupingshanensis

description: Supplementary Figure S1: Multiple sequence alignment of all the ChATPS proteins; Supplementary Table S1: Physicochemical properties of ATPS proteins in C. hupingshanensis. Supplementary Table S2: The gene coding sequences and protein sequences of ChATPS. Supplementary Table S3: Secondary structure analysis of the nine proteins. Supplementary Table S4: Primers used in qRT-PCR analysis for ChATPS. Table S5: The binding energy of each ligand to each protein at the catalytic site (unit: kcal mol-1). Table S6: At the minimum binding energy site of selenate and protein, the binding energy of each ligand and protein (unit: kcal mol-1).
DOI: 10.25549/whit-c170-54895
title: Tonopah Extension, mine, Tonopah, AZ, 1932

description: 4 photographs of man working on machinery and 3 photographs of mining machinery. "Subject: Tonopah Extension, mine Tonopah; Agency: L & T, Phillipe; Client: Union Oil; Classifications: I misc[e]l[laneous]; Original Print Order: 1 ea[ch]; Size: 11x14; Finish: gl[ossy] mtd; Re-Order: 2 #4, [ilg] # 1, 3, 5, 1 #1, 7, 2; Size: 8x10; Finish: gl[ossy]; Job: 11-28-168; Year: 1932" -- on envelope front. "6- ch[ar]g[e]d on 11-28-156 (1932)" -- on envelope back.
DOI: 10.25549/whit-c170-106206
title: Marine, Los Angeles, Calif., 1942

description: 41 photographs taken in the Whittington studio of a man dressed as a US Marine, Los Angeles, California, 1942 April 13.
DOI: 10.15468/dl.exukgo
title: Occurrence Download

description: A dataset containing 192 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tremarctos ornatus (F.G.Cuvier, 1825)"
 ]
}

 The dataset includes 192 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088938-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-106198
title: Marine, Los Angeles, Calif., 1942

description: 41 photographs taken in the Whittington studio of a man dressed as a US Marine, Los Angeles, California, 1942 April 13.
DOI: 10.15468/dl.hli1r2
title: Occurrence Download

description: A dataset containing 9487 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anthoxanthum aristatum Boiss."
 ]
}

 The dataset includes 9487 records from 158 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088939-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-54168
title: Two circulators, Ward heaters, Southern California, 1932

description: 2 photographs of circulators, Southern California, 1932. "Subject: Two circulators; Agency: Mail to: Graham Hughes, 351 No[rth] Western; Client; Ward Heater, Mr. Logue; Original Print Order: 1 ea[ch]; Size: 8x10; Finish: gl[ossy]; Year: 1932; Job: 12-1-6" -- on envelope front. "Operator's Report Name: Frank; 2 Original Photographs-- Size: 8x10; Amount: 4.50; Extra Charges: Hughes" -- on envelope back.