cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14760660.v1
title: Distortion product otoacoustic mapping measured pre- and post-loud sound exposures

description: Sampling distortion product otoacoustic emissions (DPOAEs) at multiple f<sub>2</sub>/f<sub>1</sub> ratios and f<sub>2</sub> frequency values produces a DPOAE “map.” This study examined the efficacy of DPOAE mapping compared with pure tone audiometry and standard DPOAEs for detecting noise effects in subjects exposed to loud sound. A map significance score was developed as a single measure of map change. Significance scores were evaluated before and after exposure to: loud music (LM), controlled noise (CN), and firing range noise (FR) in three separate sets of subjects. Scores were compared to audiometry and standard DPOAE results in the LM study. The LM and CN exposure studies involved 22, and 20 healthy young subjects respectively with normal hearing. Eight Marines were studied before and after FR exposure. After LM exposure, audiometry showed significant changes at 1, 2, 4, and 6 kHz. Standard DPOAE measures were also significantly different at several frequencies. Map significance scores detected changes more effectively and showed the distribution of DPOAE alterations. Map significance scores detected changes after noise exposure more reliably than audiometry and standard DPOAEs. Additionally, maps showed a diffuse response to sound exposure perhaps explaining why individual DP-grams appear less sensitive.
DOI: 10.6084/m9.figshare.14770026.v1
title: Inference of the distortion component of hearing impairment from speech recognition by predicting the effect of the attenuation component

description: A model-based determination of the average supra-threshold (“distortion”) component of hearing impairment which limits the benefit of hearing aid amplification. Published speech recognition thresholds (SRTs) were predicted with the framework for auditory discrimination experiments (FADE), which simulates recognition processes, the speech intelligibility index (SII), which exploits frequency-dependent signal-to-noise ratios (SNR), and a modified SII with a hearing-loss-dependent band importance function (PAV). Their attenuation-component-based prediction errors were interpreted as estimates of the distortion component. Unaided SRTs of 315 hearing-impaired ears measured with the German matrix sentence test in stationary noise. Overall, the models showed root-mean-square errors (RMSEs) of 7 dB, but for steeply sloping hearing loss FADE and PAV were more accurate (RMSE = 9 dB) than the SII (RMSE = 23 dB). Prediction errors of FADE and PAV increased linearly with the average hearing loss. The consideration of the distortion component estimate significantly improved the accuracy of FADE’s and PAV’s predictions. The supra-threshold distortion component—estimated by prediction errors of FADE and PAV—seems to increase with the average hearing loss. Accounting for a distortion component improves the model predictions and implies a need for effective compensation strategies for supra-threshold processing deficits with increasing audibility loss.
DOI: 10.6084/m9.figshare.19307042.v2
title: MA_Original data_code_picture.zip

description: Source code,original data and images of MA algorithm
DOI: 10.5525/gla.researchdata.1179
title: Elucidation of the immunological responses underpinning severe fever with thrombocytopenia syndrome reveals IL-6 as novel therapeutic target
DOI: 10.6084/m9.figshare.19196732.v1
title: Data for Fossorial life-style does not limit long distance dispersal in African mole-rats

description: Data and R code to analyze dispersal distances in subterranean and surface-dwelling rodents. Includes a dataset from Damaraland mole-rats in South Africa.
DOI: 10.6084/m9.figshare.19307210.v1
title: Datasets from The effects of substrate porosity, mechanical substrate properties and loading conditions on the attachment performance of the Mediterranean medicinal leech (<i>Hirudo verbana</i>)

description: Supplementary Datasets
DOI: 10.6084/m9.figshare.19307210
title: Datasets from The effects of substrate porosity, mechanical substrate properties and loading conditions on the attachment performance of the Mediterranean medicinal leech (<i>Hirudo verbana</i>)

description: Supplementary Datasets
DOI: 10.48370/ofd/pu6zh9
title: Lachnum bicolor (Bull.) P.Karst., 2236

description: Fungarium Macromycetes
DOI: 10.48370/ofd/1sf6ua
title: Lachnum bicolor (Bull.) P.Karst., 2247

description: Fungarium Macromycetes
DOI: 10.6084/m9.figshare.19085537
title: Supplementary Material for: Acute but not chronic central administration of the neuropeptide 26RFa (QRFP) improves glucose homeostasis in obese/diabetic mice

description: Introduction: The aim of the study is to investigate whether acute or chronic central administration of the hypothalamic neuropeptide 26RFa may ameliorate the glycemic control of obese/diabetic mice. Methods: mice were treated for 4 months with a high fat diet (HF) and received a single i.c.v. injection of 26RFa (3 µg) or a chronic i.c.v. administration of the peptide during 28 days via osmotic minipumps (25 µg/day). i.p. and oral glucose tolerance tests, insulin tolerance test, glucose-stimulated insulin secretion, food/water intake, horizontal/vertical activity, energy expenditure, meal pattern and whole body composition were monitored. In addition, 26RFa and GPR103 mRNA expression as well as plasma 26RFa levels were evaluated by RT-QPCR and radioimmunoassay. Results: Acute administration of 26RFa in HF mice induced a robust anti-hyperglycemic effect by enhancing insulin secretion whereas chronic administration of the neuropeptide is unable to improve glucose homeostasis in these obese/diabetogenic conditions. By contrast, chronic 26RFa treatment induced an increase of the body weight accompanied with an enhanced food intake and a decreased energy expenditure. Finally, we show that the HF diet does not alter the hypothalamic expression of the 26RFa/GPR103 neuropeptidergic system nor the levels of circulating 26RFa. Conclusion: Our data indicate that the central beneficial effect of 26RFa on glucose homeostasis, by potentiating glucose-stimulated insulin secretion, is preserved in HF mice. However, chronic administration of the neuropeptide is unable to balance glycemia in these pathophysiological conditions, suggesting that the hypothalamic 26RFa/GPR103 neuropeptidergic system mainly affects short term regulation of glucose metabolism.
DOI: 10.6084/m9.figshare.19085537.v1
title: Supplementary Material for: Acute but not chronic central administration of the neuropeptide 26RFa (QRFP) improves glucose homeostasis in obese/diabetic mice

description: Introduction: The aim of the study is to investigate whether acute or chronic central administration of the hypothalamic neuropeptide 26RFa may ameliorate the glycemic control of obese/diabetic mice. Methods: mice were treated for 4 months with a high fat diet (HF) and received a single i.c.v. injection of 26RFa (3 µg) or a chronic i.c.v. administration of the peptide during 28 days via osmotic minipumps (25 µg/day). i.p. and oral glucose tolerance tests, insulin tolerance test, glucose-stimulated insulin secretion, food/water intake, horizontal/vertical activity, energy expenditure, meal pattern and whole body composition were monitored. In addition, 26RFa and GPR103 mRNA expression as well as plasma 26RFa levels were evaluated by RT-QPCR and radioimmunoassay. Results: Acute administration of 26RFa in HF mice induced a robust anti-hyperglycemic effect by enhancing insulin secretion whereas chronic administration of the neuropeptide is unable to improve glucose homeostasis in these obese/diabetogenic conditions. By contrast, chronic 26RFa treatment induced an increase of the body weight accompanied with an enhanced food intake and a decreased energy expenditure. Finally, we show that the HF diet does not alter the hypothalamic expression of the 26RFa/GPR103 neuropeptidergic system nor the levels of circulating 26RFa. Conclusion: Our data indicate that the central beneficial effect of 26RFa on glucose homeostasis, by potentiating glucose-stimulated insulin secretion, is preserved in HF mice. However, chronic administration of the neuropeptide is unable to balance glycemia in these pathophysiological conditions, suggesting that the hypothalamic 26RFa/GPR103 neuropeptidergic system mainly affects short term regulation of glucose metabolism.
DOI: 10.48370/ofd/kc20cx
title: Lachnum bicolor (Bull.) P.Karst., 2248

description: Fungarium Macromycetes
DOI: 10.25345/c5mg7fx21
title: MassIVE MSV000088983 - GNPS Culture filtrate Fusarium proliferatum TRIAL
title: Fusarium proliferatum was grown for 7 days then extract filtrate by centrifuge for another 30 days further treatment for Panax ginseng.
DOI: 10.48370/ofd/eilkvi
title: Lactarius camphoratus (Bull.) Fr., 1814

description: Fungarium Macromycetes
DOI: 10.6084/m9.figshare.19307249
title: Supplementary Material for: Effects of L-Carnitine Treatment on Kidney Mitochondria and Macrophages in Mice with Diabetic Nephropathy

description: <b><i>Introduction:</i></b> In diabetic nephropathy (DN), mitochondrial dysfunction and leakage of mitochondrial DNA (mtDNA) are caused by the downregulation of superoxide dismutase 2 (SOD2). mtDNA induces the activation of Toll-like receptor (TLR) 9, which is present in macrophages (Mφs), and triggers their activation. <b><i>Methods:</i></b> We orally administered L-carnitine, which exerts protective effects on the mitochondria, to obesity-induced DN (db/db) mice for 8 weeks. We then investigated the effects of L-carnitine on kidney mitochondrial reactive oxygen species (mtROS) production, circulating mtDNA content, and kidney CD11b<sup>high</sup>/CD11b<sup>low</sup> Mφ functions. <b><i>Results:</i></b> In db/db mice, mtROS production increased in proximal tubular cells and kidney CD11b<sup>low</sup> Mφs; both Mφ types showed enhanced TLR9 expression. L-Carnitine treatment suppressed mtROS production in both proximal tubular cells and CD11b<sup>low</sup> Mφs (<i>p</i> &lt; 0.01), with improved SOD2 expression in the kidney (<i>p</i> &lt; 0.01), decreased circulating mtDNA content, and reduced albuminuria. Moreover, it suppressed Mφ infiltration into kidneys and reduced TLR9 expression in Mφs (<i>p</i> &lt; 0.01), thereby lowering tumor necrosis factor-α production in CD11b<sup>high</sup> Mφs (<i>p</i> &lt; 0.05) and ROS production by CD11b<sup>low</sup> Mφs (<i>p</i> &lt; 0.01). Collectively, these changes alleviated DN symptoms. <b><i>Conclusion:</i></b> The positive effects of L-carnitine on DN suggest its potential as a novel therapeutic agent against obesity-linked DN.
DOI: 10.5281/zenodo.6308874
title: Understanding Digits in Identifier Names: An Exploratory Study

description: This is the dataset that accompanies the study: "<strong>Understanding Digits in Identifier Names: An Exploratory Study</strong>." This study has been accepted for publication at: The 1<sup>st</sup> International Workshop on Natural Language-based Software Engineering (NLBSE 2022). <strong><em>Following is the abstract of the study:</em></strong> Before any software maintenance can occur, developers must read the identifier names found in the code to be maintained. Thus, high-quality identifier names are essential for productive program comprehension and maintenance activities. With developers free to construct identifier names to their liking, it can be difficult to automatically reason about the quality and semantics behind an identifier name. Studying the structure of identifier names can help alleviate this problem. Existing research focuses on studying words within identifiers, but there are other symbols that appear in identifier names-- such as digits. This paper explores the presence and purpose of digits in identifier names through an empirical study of 800 open-source Java systems. We study how digits contribute to the semantics of identifier names and how identifier names that contain digits evolve over time through renaming. We envision our findings improving the efficiency of name appraisal and recommendation tools and techniques.
description: This study is part of the work conducted by the Source Code Analysis And Natural Language Laboratory. For more information about what we do and to download the preprint of this study, visit: https://scanl.org/
DOI: 10.48370/ofd/svztuf
title: Lactarius deliciosus (L.: Fr.) Gray, 1180

description: Fungarium Macromycetes
DOI: 10.6084/m9.figshare.19307288
title: Supplementary Material for: Obesity in Older Adults and Associations with Cardiovascular Structure and Function

description: Introduction: Body mass index (BMI), despite being widely used as a marker of obesity, fails to fully capture cardiovascular risks as it is an insufficient biomarker of abdominal adiposity, unlike waist circumference (WC). We aim to characterize associations between BMI and WC with cardiovascular structure and function in older adults. Methods: Among an observational cohort study of community older adults, transthoracic echocardiography determined cardiovascular structure and function, while aerobic capacity was determined by peak oxygen uptake (VO2) metrics. The cut-offs for obesity were 27.5kg/m2 for BMI, and &gt;90cm for males and &gt;80cm for females for WC. Results: 970 older adults without cardiovascular disease [mean age 73±4 years, 432 (44%) males], 124 (12.8%) were obese by BMI definition while 347 (35.7%) were obese by WC definition. Inter-definitional agreement was fair (Cohen’s κ=0.345). Unlike BMI definition, participants defined as obese by WC were more likely to be women (65% vs 50%, p
DOI: 10.6084/m9.figshare.19307288.v1
title: Supplementary Material for: Obesity in Older Adults and Associations with Cardiovascular Structure and Function

description: Introduction: Body mass index (BMI), despite being widely used as a marker of obesity, fails to fully capture cardiovascular risks as it is an insufficient biomarker of abdominal adiposity, unlike waist circumference (WC). We aim to characterize associations between BMI and WC with cardiovascular structure and function in older adults. Methods: Among an observational cohort study of community older adults, transthoracic echocardiography determined cardiovascular structure and function, while aerobic capacity was determined by peak oxygen uptake (VO2) metrics. The cut-offs for obesity were 27.5kg/m2 for BMI, and &gt;90cm for males and &gt;80cm for females for WC. Results: 970 older adults without cardiovascular disease [mean age 73±4 years, 432 (44%) males], 124 (12.8%) were obese by BMI definition while 347 (35.7%) were obese by WC definition. Inter-definitional agreement was fair (Cohen’s κ=0.345). Unlike BMI definition, participants defined as obese by WC were more likely to be women (65% vs 50%, p
DOI: 10.25405/data.ncl.17430548.v1
title: Climate change impacts on plant-pollinator interactions and functioning - experiment data

description: All data files for the manuscript titled: "Experimental climate warming reduces floral resources and alters insect visitation and wildflower seed set in a cereal agro-ecosystem".<br>Full descriptions of the data files (and some details of the methodology) can be found in the readme file. See the open access manuscript for further details of the methodology (https://doi.org/10.3389/fpls.2022.826205).<br>All code used for analysis and plot creation can be found on Github: https://github.com/FrikadEllen/CC-plant-pollinator <br><br>
DOI: 10.6084/m9.figshare.19307294
title: Supplementary Material for: Obesity in Older Adults and Associations with Cardiovascular Structure and Function

description: Introduction: Body mass index (BMI), despite being widely used as a marker of obesity, fails to fully capture cardiovascular risks as it is an insufficient biomarker of abdominal adiposity, unlike waist circumference (WC). We aim to characterize associations between BMI and WC with cardiovascular structure and function in older adults. Methods: Among an observational cohort study of community older adults, transthoracic echocardiography determined cardiovascular structure and function, while aerobic capacity was determined by peak oxygen uptake (VO2) metrics. The cut-offs for obesity were 27.5kg/m2 for BMI, and &gt;90cm for males and &gt;80cm for females for WC. Results: 970 older adults without cardiovascular disease [mean age 73±4 years, 432 (44%) males], 124 (12.8%) were obese by BMI definition while 347 (35.7%) were obese by WC definition. Inter-definitional agreement was fair (Cohen’s κ=0.345). Unlike BMI definition, participants defined as obese by WC were more likely to be women (65% vs 50%, p
DOI: 10.25405/data.ncl.17430548
title: Climate change impacts on plant-pollinator interactions and functioning - experiment data

description: All data files for the manuscript titled: "Experimental climate warming reduces floral resources and alters insect visitation and wildflower seed set in a cereal agro-ecosystem".<br>Full descriptions of the data files (and some details of the methodology) can be found in the readme file. See the open access manuscript for further details of the methodology (https://doi.org/10.3389/fpls.2022.826205).<br>All code used for analysis and plot creation can be found on Github: https://github.com/FrikadEllen/CC-plant-pollinator <br><br>
DOI: 10.6084/m9.figshare.19307294.v1
title: Supplementary Material for: Obesity in Older Adults and Associations with Cardiovascular Structure and Function

description: Introduction: Body mass index (BMI), despite being widely used as a marker of obesity, fails to fully capture cardiovascular risks as it is an insufficient biomarker of abdominal adiposity, unlike waist circumference (WC). We aim to characterize associations between BMI and WC with cardiovascular structure and function in older adults. Methods: Among an observational cohort study of community older adults, transthoracic echocardiography determined cardiovascular structure and function, while aerobic capacity was determined by peak oxygen uptake (VO2) metrics. The cut-offs for obesity were 27.5kg/m2 for BMI, and &gt;90cm for males and &gt;80cm for females for WC. Results: 970 older adults without cardiovascular disease [mean age 73±4 years, 432 (44%) males], 124 (12.8%) were obese by BMI definition while 347 (35.7%) were obese by WC definition. Inter-definitional agreement was fair (Cohen’s κ=0.345). Unlike BMI definition, participants defined as obese by WC were more likely to be women (65% vs 50%, p
DOI: 10.5258/soton/d2140
title: ML-assisted Equalization for 50-Gb/s/λ O-band CWDM Transmission over 100-km SMF

description: This dataset supports the publication: Yang Hong, Stavros Deligiannidis, Natsupa Taengnoi, Kyle R. H. Bottrill, Naresh K. Thipparapu, Yu Wang, Jayanta K. Sahu, David J. Richardson, Charis Mesaritakis, Adonis Bogris, and Periklis Petropoulos ML-assisted Equalization for 50 Gb/s/λ O-band CWDM Transmission over 100-km SMF IEEE Journal of Selected Topics in Quantum Electronics 10.1109/JSTQE.2022.3155990
DOI: 10.48370/ofd/epvmlb/1wymn9
title: Zając Hubert .pdf

description: :unav
DOI: 10.48370/ofd/epvmlb
title: Odnowienia naturalne jodły pospolitej poza zwartym zasięgiem wybranych drzewostanów w pobliżu Rezerwatu Jata w Nadleśnictwie Łuków

description: Promotor: Rafał Paluch
DOI: 10.5281/zenodo.5902396
title: NDN Content Store and Caching Policies: Performance Evaluation - Dataset

description: This is a dataset results from the evaluation of the following caching replacement policies: Random, Least Recently Used (LRU), Least Frequently Used (LFU), and First In First Out (FIFO) applied to NDN. It was used for the paper "NDN Content Store and Caching Policies: Performance Evaluation", DOI: https://doi.org/10.3390/computers11030037 . The simulation tool used is the ndnSIM-2.7. Includes: 1. The actual dataset from simulations (for both NDN Testbed and Abilene). 2. The C++ ndnSIM scenarios (for both NDN Testbed and Abilene). 3. Matlab scripts for data extraction. 4. Simple Bash scripts for automating the execution
DOI: 10.5281/zenodo.5902395
title: NDN Content Store and Caching Policies: Performance Evaluation - Dataset

description: This is a dataset results from the evaluation of the following caching replacement policies: Random, Least Recently Used (LRU), Least Frequently Used (LFU), and First In First Out (FIFO) applied to NDN. It was used for the paper "NDN Content Store and Caching Policies: Performance Evaluation", DOI: https://doi.org/10.3390/computers11030037 . The simulation tool used is the ndnSIM-2.7. Includes: 1. The actual dataset from simulations (for both NDN Testbed and Abilene). 2. The C++ ndnSIM scenarios (for both NDN Testbed and Abilene). 3. Matlab scripts for data extraction. 4. Simple Bash scripts for automating the execution
DOI: 10.5281/zenodo.5871109
title: Hydrogeological Survey in the Mincio River and Goito aquifer for the hydrological year 2020-2021

description: Data collected from 2020 to 2021 in surface- and groundwater in the Goito aquifer and Mincio River (Po Plain, northen Italy). These data were published in https://doi.org/10.3390/hydrology9030044.
DOI: 10.5281/zenodo.5871108
title: Hydrogeological Survey in the Mincio River and Goito aquifer for the hydrological year 2020-2021

description: Data collected from 2020 to 2021 in surface- and groundwater in the Goito aquifer and Mincio River (Po Plain, northen Italy). These data were published in https://doi.org/10.3390/hydrology9030044.
DOI: 10.48370/ofd/fkxs9r/2eav6k
title: Zaremba Paweł.pdf

description: :unav
DOI: 10.48370/ofd/fkxs9r
title: Sposoby inwentaryzacji wolno żyjącej populacji żubrów (Bison bonasus) w Polsce północno-wschodniej.

description: Promotor: Michał Krzysiak
DOI: 10.6084/m9.figshare.18857399
title: Supplementary Material for: SELENOT deficiency in the mouse brain impacts catecholaminergic neuron density: an immunohistochemical, in situ hybridization and 3D light-sheet imaging study

description: Background: Selenoprotein T (SELENOT), a PACAP-regulated thioredoxin-like protein, plays a role in catecholamine secretion and protects dopaminergic neurons. However, the role of SELENOT in the establishment of the catecholaminergic (CA) neuronal system is not known yet. Methods: We analyzed by immunohistochemistry and RNAscope in situ hybridization the distribution of SELENOT and the expression of its mRNA, respectively. In addition, 3D imaging involving immunostaining in toto, clearing through the iDISCO+ method, acquisitions by light sheet microscopy and processing of 3D images was performed to map the CA neuronal system. A semi-automatic quantification of 3D images was carried out. Results: SELENOT protein and mRNA are widely distributed in the mouse brain, with important local variations. Three-dimensional mapping, through tyrosine hydroxylase (TH) labeling, and semi-automated quantification of CA neurons in brain-specific SELENOT knockout mice showed a significant decrease in the number of TH-positive neurons in the area postrema (AP-A2), the A11 cell group (A11) and the zona incerta (ZI-A13) of SELENOT-deficient females, and in the hypothalamus (Hyp-A12-A14-A15) of SELENOT-deficient females and males. Conclusion: These results showed that SELENOT is diffusely expressed in the mouse brain and that its deficiency impacts CA neuron distribution in different brain areas including Hyp-A12-A14-A15, in both male and female mice.