cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13519118.v1
title: Detecting Anomalous Time Series by GAMLSS-Akaike-Weights-Scoring

description: We, the American Statistical Association, the Institute of Mathematics, Editors, and Publisher of the Journal of Computational and Graphical Statistics, have retracted the following article: Sodja, Coda. “Detecting Anomalous Time Series by GAMLSS-Akaike-Weights-Scoring,” Journal of Computational and Graphical Statistics, Latest Articles, DOI: 10.1080/10618600.2020.1868306 The retraction is due to a misunderstanding that resulted in a double submission to JCGS and another journal. The author has approved the retraction from JCGS. We have been informed in our decision-making by our policy on publishing ethics and integrity and the COPE guidelines on retractions. The retracted article will remain online to maintain the scholarly record, but it will be digitally watermarked on each page as “Retracted”.
DOI: 10.34740/kaggle/dsv/14685678
title: Daily Public Opinion on Israel-Palestine War
DOI: 10.15468/dl.j5sfgq
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia antiquorum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 69 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003222-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wtnxdd
title: Occurrence Download

description: A dataset containing 1253 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia mesembryanthemifolia",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1253 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003223-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14685723
title: Public Opinion on Climate Change (Updated Daily)
DOI: 10.15468/dl.ka3gwh
title: Occurrence Download

description: A dataset containing 2168 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia pekinensis",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 2168 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003224-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.335pwa
title: Occurrence Download

description: A dataset containing 1330 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Excoecaria agallocha",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1330 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003225-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14685616
title: Child Malnutrition with Socioeconomic Factors
DOI: 10.15468/dl.wv7nw5
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fontainea venosa",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 77 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003226-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7rkwj5
title: Occurrence Download

description: A dataset containing 695 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pelopidas conjuncta"
 ]
}

 The dataset includes 695 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003227-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7hzk2s
title: Occurrence Download

description: A dataset containing 1102287 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Kyrgyzstan, Kazakhstan, Tajikistan, Turkmenistan, Uzbekistan)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1102287 records from 1001 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003217-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3929/ethz-b-000720083
title: The MA-3 Dataset: Data of three manual assembly use cases
DOI: 10.6086/d11974
title: Developing an efficient dispatching strategy to support commercial fleet electrification

description: This is a real-world dataset in a full-service supply chain company to
 evaluate the performance of our proposed battery electric truck
 dispatching strategy. We generated four instances ranging from 47 to 90
 customers based on the real-world dataset, the typical one-day historical
 movements of a heavy-duty diesel truck fleet that operated in the
 Riverside and San Bernardino County regions of California.
description: ## Developing an Efficient Dispatching Strategy to Support Commercial
 Fleet Electrification \[dataset] The generated four fleet operation
 instances ranging from 47 to 90 customers are based on a real-world
 dataset, the typical one-day historical movements of a heavy-duty diesel
 truck fleet that operated in the Riverside and San Bernardino County
 regions of California. ## Description of the data and file structure There
 are three types of CSV files: problem instance (BETVRPB), related distance
 matrix (BETVRPB_dist), and time matrix (BETVRPB_time). The distance matrix
 and time matrix files are used for the calculation. The detailed
 information is illustrated in the following. For the problem instances,
 the generated battery electric truck (vehicle) routing problem with
 backhauls (denoted BETVRPB) instances in our case study are described in
 the CSV files, i.e., BETVRPB1-BETVRPB4. It contains delivery ID, tractor
 ID, delivery types (i.e., pickups and deliveries), service time duration,
 required demands, and city name. That information is shown in the columns
 of the file BETVRPB from left to right, respectively. The depot time
 window section is shown in the last row of each problem instance. For each
 dispatching instance, the distance [in meter] and travel duration [in
 second] matrices are generated by OpenRouteService (openrouteservice.org)
 for the truck routes between node-to-node locations, which can be used to
 estimate the trip energy consumption. There is an example illustrating how
 to use the generated instances. Take the problem instance BETVRPB1 as an
 example. It contains 47 nodes, where the depot ID is 0, and others are
 customers (from 1 to 46). The related distance and trip time information
 is illustrated in files 'BETVRPB1_dist' and
 'BETVRPB1_time' for calculation steps. For example, the truck
 travel distance from the depot (0) to the customer ID1 is the element
 (0,1) in the distance matrix file (i.e., BETVRPB1_dist). The calculation
 of travel time is similar to the travel distance.
DOI: 10.5061/dryad.280gb5mv7
title: Data from: Introgression of non-native mitochondrial haplotypes from farmed to wild Atlantic salmon

description: Farmed salmon escape and interbreed with wild Atlantic salmon on a large
 scale. We studied introgression of mitochondrial haplotypes from farmed
 Atlantic salmon originating from the Eastern Atlantic phylogenetic group
 to wild salmon of the Barents-White Sea phylogenetic group. We find that
 farmed genetic introgression introduced novel, non-native haplotypes into
 the Barents-White Sea phylogenetic group. The mitochondrial genome has
 important functional effects and is inherited as a haploid from the
 mother. Hence, the observed introgression across natural genetic barriers
 is expected to cause long-lasting functional maladaptation of the hybrids
 in the maternal line. As the use of farmed Atlantic salmon from non-native
 phylogenetic groups is widespread in aquaculture, the impact on wild
 Atlantic salmon may be more severe than previously recognized. Our results
 highlight the ecological risks of releasing non-native wild and
 domesticated animals.
description: Data from: Introgression of non-native mitochondrial haplotypes from
 farmed to wild Atlantic salmon Haplotypes.csv Mitochondrial haplotypes for
 wild and farmed Atlantic salmon used to analyse the introgression of
 non-native mitochondrial haplotypes from farmed to wild Atlantic salmon in
 Northern Norway. Columns: Individual: individual id year: year scale
 sample was collected River_code: river id corresponding to table and map
 in supplementary material Pwild: likelihood of an individual to belong to
 a wild versus a farmed reference type: group of sample corresponding to
 analyses in the article haplotype: mitochondrial haplotype, sequences can
 be found in supplementary material
DOI: 10.5061/dryad.crjdfn39j
title: Climate and ant diversity explain the global distribution of ant-plant mutualisms

description: Biotic interactions play an important role in shaping species geographic
 distributions and diversity patterns. However, the role of mutualistic
 interactions in shaping global plant diversity patterns remains poorly
 understood, particularly with respect to interactions with invertebrates.
 It is unclear how the nature of different mutualisms interacts with
 abiotic drivers and affects the distribution of mutualistic organisms.
 Here, we present a global-scale biogeographic analysis of three distinct
 ant-plant mutualisms, differentiating between plants bearing domatia,
 extrafloral nectaries (EFNs), and elaiosomes, based on comprehensive
 geographic distributions of ~19,000 flowering plants and ~13,000 ant
 species. Domatia and extrafloral nectaries involve indirect plant defences
 provided by ants, while elaiosomes attract ants to disperse seeds. Our
 results reveal distinct biogeographic patterns of different ant-plant
 mutualisms, with domatium- and EFN-bearing plant diversity decreasing
 sharply from the equator towards the poles, while elaiosome-bearing plants
 prevail at mid-latitudes. Present climate, especially mean annual
 temperature and precipitation, emerge as the strongest predictors of
 ant-associated plant diversity. In hot and moist regions, typically the
 tropics, the representation of EFN-bearing plants increases with the
 proportion of potential ant partners while domatium-bearing plants show no
 correlation with ants. In dry regions, plants with elaiosomes are strongly
 linked to interacting ant seed dispersers. Our results suggest that ants
 in combination with climate drive the spatial variation of plants bearing
 domatia, extrafloral nectaries, and elaiosomes, highlighting the
 importance of mutualistic interactions for understanding plant
 biogeography.
DOI: 10.5061/dryad.g1jwstqwk
title: Data from: Concrete survivors: The herpetofauna of an urban green area over 100 years of increasing urbanization

description: The goal of our study was to evaluate changes in the assemblage of
 reptiles in an urban habitat over 100 years of increasing urbanization,
 aiming to identify which ecological attributes allowed the persistence of
 species that can be found in the area today. To accomplish that, we
 accessed historical records in two important scientific collections for
 the study area and carried out fieldwork to access the current reptile
 assemblage in an urban green area, in São Paulo, Brazil. The dataset
 presented here is the result of all individuals collected in the study
 area between 1908 and 2019, including also the animals collected by the
 authors during the fieldwork carried out in 2016 and preserved in the
 collection. 
description: To have acess to the
 specimens, we asked the curators to provide us with a spreedsheet with all
 animals (reptiles and amphibians) that were collected in the city of São
 Paulo from the first record to the last available in the collections. We
 received a dataset and filtered it to show only specimens with a specific
 location reported. We then selected all specimens collected at the
 Instituto Butantan or at the Universidade de São Paulo. Specimens without
 specific location were disregarded. 
 Once we had all the specimens
 from the study site, we also assessed whether they were currently
 available in the collection, and missing specimens were disregarded in the
 data analysis. We check preserved specimens and, when necessary, seek
 advice from senior herpetologists in correctly identifying specimens.
 However, it was only necessary once, for an amphibian we collected during
 fieldwork, which we sent to Dr. José P. Pombal Jr. Except for the animals that we personally
 collected using specific methods, the records before and after 2016 came
 from occasional encounters involving the Institution's
 staff.  After processing all data and information about
 the specimens preserved in the collections, we used the species richness
 of each period/year to infer the reptile assemblage in the area during our
 sampling time. 
description: The dataset is available in Excel, so it can be easily open in
 any software that can read .xls and similar.
DOI: 10.5061/dryad.zcrjdfnjd
title: Data from: Warming-induced functional shifts in the decomposer community interact with plant community compositional shifts to impact litter decomposition

description: Climate warming is altering plant and soil microbial communities, with
 important implications for ecosystem processes like litter decomposition.
 As warming alters plant community composition, quality of litter will
 change. Further, shifts in microbial community activity and/or composition
 will alter microbial function. However, it is not yet completely
 understood how these shifts will interact to drive decomposition. We
 explored how changes in plant and microbial communities interact to
 influence litter decomposition using a 15-year-old grassland warming
 experiment. Previous studies within this system have shown that warming
 shifted the microbial community in ways that accelerate litter
 decomposition while simultaneously shifting the plant community in ways
 that may slow decomposition. Specifically, warming increased abundance of
 Sorghastrum nutans, while decreasing abundance of the previously dominant
 Schizachyrium scoparium. Using a series of lab-based microcosm
 experiments, we examined the rate at which eight common grasses and,
 separately, varying abundances of S. nutans and S. scoparium decomposed.
 Using litter and soil from the warming experiment, we then incubated soils
 from warmed or control plots with different abundances of S. nutans and S.
 scoparium in a reciprocal design. We found S. nutans to be the
 slowest-decomposing grass in our system. Further, decomposition slowed as
 S. nutans increased and S. scoparium decreased. When examining the
 interaction of plant and microbial communities, decomposition was
 generally greater early in our experiment as the relative abundance of S.
 scoparium increased. However, soil microbial community origin and litter
 composition interacted significantly. Specifically, decomposition
 increased with greater relative abundance of S. scoparium on soils derived
 from control plots, while litter composition did not shape rates of
 decomposition on soils from warmed plots. The influence of litter species
 on decomposition waned in the later stages of the experiment when
 decomposition was driven by microbial community origin. These results
 suggest that warming-induced changes in microbial community function may
 interact with changes in plant litter composition to mitigate the impacts
 of warming on rates of decomposition. This emphasizes the importance of
 considering concurrent warming-induced changes in both plant and microbial
 communities on ecosystem processes like decomposition.
DOI: 10.5061/dryad.hhmgqnkn5
title: Data from: Serosurvey of SARS-COV-2 at a large public university

description: Objective: This study investigated the seroprevalence of SARS-CoV-2
 antibodies among adults over 18 years. Design: Prospective cohort study.
 Settings: a population-based study among the big university community.
 Participants: This study took volunteers over five days and recruited
 adult 1064 participants. Primary outcome measures: We conducted a
 seroprevalence in our community with SARS-CoV-2-specific antibodies due to
 previous exposure to SARS-CoV-2 and/or vaccination. Results: The
 seroprevalence of the anti-receptor binding domain (RBD) antibody was 90%
 by a lateral flow assay and 88% by a semi-quantitative chemiluminescent
 immunoassay. The seroprevalence for anti-nucleocapsid (NC) was 20%. In
 addition, individuals with previous natural COVID infection plus
 vaccination had higher anti-RBD antibody levels compared to those who had
 vaccination only or infection only. Individuals who had a breakthrough
 infection had the highest anti-RBD antibody levels. Conclusion: Accurate
 estimates of the cumulative incidence of SARS-CoV-2 infection can inform
 the development of university risk mitigation protocols such as
 encouraging booster shots, extending mask mandates, or reverting to online
 classes. It could help us to have clear guidance to act at the first sign
 of the next surge as well, especially since there is a surge of COVID
 subvariant infections.
description: This is a survey and lab data. Survey data is exported from
 Qualtrics and lab experimental data is added separately. Additional
 information regarding the methodology will be published in <em>BMJ
 Open</em>. All demographic information and assay
 results were provided via Excel files. Any participant under the age of
 18, those who did not provide a biological sample, or those with
 non-unique sample IDs were removed from the study. Assay information was
 first merged together by a sample ID and those in common were kept in the
 study (inner join). The combined assay data was then merged with the
 demographic information. Those who provided biological samples but no
 demographic information were removed from the study (left join). Finally,
 we performed data cleaning in order to fix input mistakes (e.g. spelling,
 wrong dates, etc.) and group responses in the appropriate categories. We
 also generated new variables based on the information received from
 participants, such as calculating the participant’s last vaccination date,
 if applicable, or whether a participant completed their vaccination
 cycle.
description: Empty cells in the data file represent data not available in the
 study due to failure to report by the study participant.
DOI: 10.5061/dryad.2280gb5z5
title: Data from: Ant abundance in pitfall traps across different fire treatments

description: Fire is a dominant ecological force shaping many faunal communities
 globally. Fire affects faunaeither directly, such as by killing
 individuals, or indirectly, such as by modifying vegetation structure.
 Vegetation structure itself also modulates fire frequency and intensity.
 As such, faunal responses to fire need to be seen through the lens of
 variable fire activity and vegetation structure. Here, we incorporate
 information on fire activity and vegetation structure to enhance an
 understanding of the response of ants to long-term (17-year) experimental
 fire treatments in an extremely fire-prone tropical savanna in northern
 Australia. A previous analysis revealed limited divergence in ant
 communities after five years of experimental fire treatment. Hence, we
 first investigated the extent to which ant communities diverged over a
 subsequent 12 years of treatment. We then assessed the relative
 contribution of fire treatment, cumulative fire intensity(fire activity)
 and woody cover to responses of ant species frequency of occurrence,
 richness and composition. We found that, even after 17 years, fire
 treatments explained little variation in any ant response variable. In
 contrast, woody cover was a strong predictor for all of them, while fire
 activity was a moderate predictor for abundance and richness. Ant species
 occurrence and richness increased in open habitats receiving higher levels
 of fire activity, compared with plots with higher vegetation cover
 experiencing low (or no) fire activity. Moreover, species composition
 differed between plots with high and low vegetation cover. Our findings
 provide experimental support to the principle that the effects of fire on
 fauna are primarily indirect, via its effect on vegetation structure.
 Furthermore, our results show that a ‘uniform’ fire regime does not have
 uniform impacts on the ant fauna, because of variability imposed by
 interactions between vegetation structure and fire activity. This helps
 explain why there is often a weak relationship between pyrodiversity and
 biodiversity, and it lessens the need for active management of
 pyrodiversity to maintain biodiversity.
description: This dataset consists of ant abundance data collected using
 pitfall traps at the Territory Wildlife Park fire experiment near Darwin,
 NT Australia. It was used for an ecology project assessing the effects of
 fire on ant diversity.
description: This dataset can be opened using Excel or R.
DOI: 10.5061/dryad.m63xsj47f
title: Data from: Superb Lyrebird nesting habitat and the 2019 megafires in Australia

description: An animal’s habitat offers food and protection necessary for survival and
 reproduction and consequently impacts individual fitness. In birds,
 understanding nest site selection is critical to understanding a species’
 ecology and developing effective conservation management actions. The
 Superb Lyrebird (Menura novaehollandiae) is one of many endemic species
 extensively impacted by Australia’s unprecedented 2019-20 megafires. Over
 a period of 5 months, an estimated 43% of the entire range of this
 slow-breeding species was burnt, with the biggest impact on the central
 subspecies M. n. novaehollandiae (55%). 4 months prior to these megafires,
 we conducted a field study of nest site habitat selection in the Superb
 Lyrebird within the Greater Blue Mountains World Heritage Area (15,400
 km2): a key stronghold of the central subspecies of the Superb Lyrebird.
 We found that at the local scale, lyrebird nest sites were more likely to
 be found in habitats characterized by dense canopy trees and rich in
 rainforest elements such as vines and treeferns. At the landscape scale,
 lyrebird nests were most likely to be constructed in rainforest; this
 fire-sensitive habitat type made up only 1% of the Greater Blue Mountains
 World Heritage Area. The probability of nest occurrence also increased
 with slope. We also found that more than 74% of all nesting habitat within
 the Greater Blue Mountains World Heritage Area burned in the 2019-20
 megafires, including 80% of areas of high suitability for nesting. These
 results suggest that the impact of these megafires on Superb Lyrebirds may
 be greater than currently thought. Given the importance of rainforest as
 nesting habitat for the superb lyrebird, managers should prioritize its
 restoration and protect it from future fire events. More broadly, our
 results illustrate how large-scale catastrophic events – such as megafires
 – can disproportionately affect habitats critical to specific points
 within an organism’s life cycle.