cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6729368.v2
title: Suppression of autophagy and HCK signaling promotes PTGS2<sup>high</sup> FCGR3<sup>−</sup> NK cell differentiation triggered by ectopic endometrial stromal cells

description: Impaired NK cell cytotoxic activity contributes to the local dysfunctional immune environment in endometriosis (EMS), which is an estrogen-dependent gynecological disease that affects the function of ectopic endometrial tissue clearance. The reason for the impaired cytotoxic activity of NK cells in an ectopic lesion microenvironment (ELM) is largely unknown. In this study, we show that the macroautophagy/autophagy level of endometrial stromal cells (ESCs) from EMS decreased under negative regulation of estrogen. The ratio of peritoneal FCGR3<sup>−</sup> NK to FCGR3<sup>+</sup> NK cells increases as EMS progresses. Moreover, the autophagy suppression results in the downregulation of HCK (hematopoietic cellular kinase) by inactivating STAT3 (signal transducer and activator of transcription 3), as well as the increased secretion of the downstream molecules CXCL8/IL8 and IL23A by ESCs, and this increase induced the upregulation of FCGR3<sup>−</sup> NK cells and decline of cytotoxic activity in ELM. This process is mediated through the depression of microRNA <i>MIR1185-1-3p</i>, which is associated with the activation of the target gene <i>PTGS2</i> in NK cells. FCGR3<sup>−</sup> NK with a phenotype of PTGS2/COX2<sup>high</sup> IFNG<sup>low</sup> PRF1<sup>low</sup> GZMB<sup>low</sup> induced by <i>hck</i> knockout (<i>hck</i><sup>−/-</sup>) or 3-methyladenine (3-MA, an autophagy inhibitor)-stimulated ESCs accelerates ESC’s growth both <i>in vitro</i> and <i>in vivo</i>. These results suggest that the estrogen-autophagy-STAT3-HCK axis participates in the differentiation of PTGS2<sup>high</sup> IFNG<sup>low</sup> PRF1<sup>low</sup> GZMB<sup>low</sup> FCGR3<sup>−</sup> NK cells in ELM and contributes to the development of EMS. This result provides a scientific basis for potential therapeutic strategies to treat diseases related to impaired NK cell cytotoxic activity. <b>Abbreviations</b>: anti-FCGR3: anti-FCGR3 with neutralizing antibody; Ctrl-ESC: untreated ESCs; CXCL8: C-X-C motif chemokine ligand 8; ectoESC: ESCs from ectopic lesion; ELM: ectopic lesion microenvironment; EMS: endometriosis; ESCs: endometrial stromal cells; eutoESC:eutopic ESCs; HCK: hematopoietic cellular kinase; <i>HCK(OE)</i>: overexpression of HCK; IFNG: interferon gamma; <i>IL23A (OE)</i>: overexpression of <i>IL23A</i>; KLRK1: Killer cell lectin like receptor K1; MAP1LC3B/LC3B: microtubule-associated protein 1 light chain 3 beta; 3 -MA: 3-methyladenine; 3-MA-ESC: 3-MA-treated ESCs; <i>MIR1185-1-3p<sup>+</sup></i>: overexpression of <i>HsMIR1185-1-3p</i>; NK: natural killer; normESCs: normal ESCs; Rap-ESC:rapamycin-treated ESCs; PCNA: proliferating cell nuclear antigen; PF: peritoneal fluid; SFKs: SRC family of cytoplasmic tyrosine kinases; si-<i>HCK</i>: silencing of <i>HCK</i>; si<i>IL23A</i>: silencing of <i>IL23A</i>; USCs: uterus stromal cells.
DOI: 10.18126/b3d8-s4z8
title: Bimolecularly passivated interface enables efficient and stable inverted perovskite solar cells
DOI: 10.15468/ev7jzp
title: Breeding success of Southern Australian little penguins, Australia (1990-2017)

description: Breeding success (counts of eggs, fledgings, nestlings) of Little Penguins (Eudyptula minor) at 10 colonies in South Australian over a nonconsecutive 28-yr time period. Data from Flinders University Research Datasets (https://doi.org/10.25957/dyv5-4a64).
DOI: 10.15468/58d87r
title: Projet de Gravière à Autreville-sur-Moselle (54) - Données odonates Autreville-sur-Moselle 2015

description: Données relatives aux odonates présents sur le site en question se trouvant sur la commune d'Autreville-sur-Moselle, en 2015.
DOI: 10.18126/a1el-l0yg
title: Aerosol‐Jet‐Printable Covalent Organic Framework Colloidal Inks and Temperature‐Sensitive Nanocomposite Films
DOI: 10.15468/7v8cas
title: Projet éolien de Burey - Données chiroptères en période de parturition, SM4BAT-FS

description: Etude des chiroptères au sol avec des points d'écoutes passives
DOI: 10.18126/fu9m-y02f
title: Chiral and flat-band magnetic quasiparticles in ferromagnetic and metallic kagome layers
DOI: 10.18126/0j6m-p79v
title: Air-stable ternary organic solar cells achieved by using fullerene additives in non-fullerene acceptor-polymer donor blends
DOI: 10.18126/aut7-zp3j
title: Dataset for the article "Enhanced Twist-Averaging Technique for Magnetic Metals: Applications using Quantum Monte Carlo".

description: Dataset for the article "Enhanced Twist-Averaging Technique for Magnetic Metals: Applications using Quantum Monte Carlo."
DOI: 10.18126/k9al-w012
title: Micromagnetic simulation training data for skyrmion detection in Lorentz TEM
DOI: 10.18126/tmk5-zf6h
title: Mof-generation-at-scale (mofa) GEOM dataset

description: Training data (GEOM) for GHP_MOFassemble code. 
GHP_MOFassemble is used as part of MOF-generation-at-scale project. 
Training data was generated using the codes from DiffLinker paper.
DOI: 10.18126/icm7-z0n8
title: The role of electron correlations in the electronic structure of putative Chern magnet TbMn6Sn6 using correlated methods

description: Dataset for "The role of electron correlations in the electronic structure of putative Chern magnet TbMn6Sn6 using correlated methods"
DOI: 10.15468/fy32gd
title: Parc éolien de Perles-Suivi de mortalité - Perles - 2021

description: Suivi de mortalité du parc éolien de Perles effectué dans le cadre du suivi post-implantation d’une installation classée ICPE.
DOI: 10.15124/7e27c95e-63f5-43de-9cf7-d1aeb52f6d02
title: Open-access data for the paper "Dibaryons and where to find them"
DOI: 10.18126/y2vi-ntsk
title: Data for Momentum Transfer Resolved Electron Correlation Microscopy

description: 5D electron correlation microscopy data from a Pt57.5Cu14.7Ni5.2P22.5 metallic glass. Associated with the publication "Momentum Transfer Resolved Electron Correlation Microscopy" by Shuoyuan Huang and Paul Voyles, Ultramicroscopy 113886 (2023) DOI: 10.1016/j.ultramic.2023.113886
DOI: 10.6084/m9.figshare.13545113
title: Additional file 5 of DNA methylation and lipid metabolism: an EWAS of 226 metabolic measures

description: Additional file 5: Table S4. Replication tables. Replicated associations are displayed by CpG site, CpG gene location, metabolite (metabolic measure), and metabolite type (metabolic measure type). A total of 274 significant, robust associations in the discovery cohort (KORA F4) were found.
DOI: 10.18126/a6sr-0s9p
title: Two-Dimensional Metal–Organic Framework Self-Assembly and Defect Engineering Studied <i>via</i> Coarse-Grained Simulations

description: These files contain the data supporting all of the results in Reum N. Scott, et. al, Metal–organic frameworks (MOFs) are crystalline materials that self-assemble from inorganic nodes and organic linkers, and isoreticular chemistry allows for modular and synthetic reagents of various sizes. In this study, a MOF's components—metal nodes and organic linkers—are constructed in a coarse-grained model from isotropic beads, retaining the basic symmetries of the molecular components. Lennard-Jones and Weeks–Chandler–Andersen pair potentials are used to model attractive and repulsive particle interactions, respectively. We analyze the crystallinity of the self-assembled products and explore the role of modulators—molecules that compete with the organic linkers in binding to the metal nodes, and which we construct analogously—during the self-assembly process of defect-engineered MOFs. Coarse-grained simulation allows for the uncoupling of experimentally interdependent variables to broadly map and determine essential MOF self-assembly conditions, among which are properties of the modulator: binding strength, size (steric hindrance), and concentration. Of these, the simulated modulator's binding strength has the most pronounced effect on the resulting MOF's crystal size.
DOI: 10.18126/b3yc-1mnp
title: Targeted Discovery of Low-Coordinated Crystal Structures via Tunable Particle Interactions

description: This dataset accompanies the manuscript by H. Pan and J. Dshemuchadse, “Targeted Discovery of Low-Coordinated Crystal Structures via Tunable Particle Interactions” ACS Nano 17(8), 7157–7169 (2023). In this work, we designed a new isotropic pair potential, in which all energy wells and maxima can be tuned independently. We use our interaction potential design to systematically explore self-assembled crystal structure configurations, specifically targeting low-coordinated structures. We report the computational self-assembly of 20 new crystal structure types, 14 of which are low-coordinated, and we investigate the relationship between features of the interaction potential and the resulting structures. This dataset includes over 2000 final simulation frames of the resulting crystal droplets (.gsd) and the corresponding interaction potential and simulation parameters (.json) used in this study. A README.txt file is included for parsing the data. We hope that this dataset will be useful for a variety of future work, both fundamental in nature as well as data-centric applications related to self-assembly, interaction potentials, and complex crystal structures.
DOI: 10.6084/m9.figshare.13545113.v1
title: Additional file 5 of DNA methylation and lipid metabolism: an EWAS of 226 metabolic measures

description: Additional file 5: Table S4. Replication tables. Replicated associations are displayed by CpG site, CpG gene location, metabolite (metabolic measure), and metabolite type (metabolic measure type). A total of 274 significant, robust associations in the discovery cohort (KORA F4) were found.
DOI: 10.15468/dckxmv
title: Ferme éolienne de la Queue d'Ane - Inventaire des espèces de chauves-souris observées en altitude

description: Liste des espèces de chauves-souris observées en altitude sur la zone d'étude du projet de parc éolien Ferme éolienne de la Queue d'Ane
DOI: 10.18126/r7lp-z2wj
title: Software and Datasets for "Accelerating Electronic Stopping Power Predictions by 10 Million Times with a Combination of Time-Dependent Density Functional Theory and Machine Learning"

description: The software associated with a publication showing how to quickly assess the electronic stopping power of a material using a combination of simulation and machine learning. This publication is a snapshot of [our GitHub repository](https://github.com/globus-labs/stopping-power-ml/tree/mdfv231027) including the intermediate files used to communicate between each notebook.
DOI: 10.15468/eyvtb5
title: Suivi Environnemental 2021-2022 Ferme éolienne des Tilleuls - Chiro à hauteur de nacelle 2021 Tilleuls

description: Suivi chiroptérologique à hauteur de nacelle sur un cycle complet sur le parc des Tilleuls
DOI: 10.18126/5q8s-3ef9
title: Grain structure evolution during heat treatment of a Al-5wt%Cu alloy studied with lab-based diffraction contrast tomography

description: ### Sample and materials
* Sample: Al-wt%Cu alloy
* Dimension: 1.4mm in diameter, 6.5mm in length

### Experiment and characterisation
* Heat treatment: 15min annealing at 630°C in a muffle furnace, air cooling to room temperature
* X-ray imaging equipment: ZEISS Xradia 520 Versa X-ray microscope with LabDCT pro module
* Absorption contrast tomography scan: 80kV-7W, 4X detector, 1601 projections, 1.84 µm voxel size
* Diffraction contrast tomography scan: 110kV-10W, flat panel detector, helical phyllotaxis scanning scheme, 2900 projections

### Data 
* Number of datasets: 11 
* Format: .dream3d 
* Naming: t0 - initial state, t10 - after the 10th annealing treatment
DOI: 10.15468/vxdwgx
title: Demande d'autorisation environnementale - Ouverture d'une carrière - Inventaire chiroptères pour un projet de Demande d'autorisation environnementale

description: Passage d'un expert chiroptérologue sur l'emprise durant 1 jour (recherche de gîtes) et 3 nuits, répartis de juin 2018 à août 2018. Inventaire par points d'écoute et écoute en cheminement à l'aide d'un détecteur manuel hétérodyne/expansion de temps (Pettersson Elektroniks D240X + enregistreur numérique Edirol R09-HR). Enregistrement et analyse de 12 nuits complètes d'échantillonnage au détecteur automatique (Wildlife Acoustics SM2BAT, v.384kHz).
DOI: 10.18126/2kdh-3lwi
title: Time-Dependent Density Functional Theory Calculations of Proton Radiation in Aluminum

description: Input file and outputs of Real Time Time-Dependent Density Functional Data (RT-TDDFT) computations of proton radiation in Aluminum. This dataset contains four additional trajectories in Aluminum using the same settings as in [Schleife et al. (2015)](https://journals.aps.org/prb/abstract/10.1103/PhysRevB.91.014306).
DOI: 10.18126/uy0k-bwkq
title: Accurate atomistic first-principles calculations of electronic stopping

description: This dataset contains the outputs of real time time-dependent density functional theory (RT-TDDFT) calculations of a proton traveling at high velocities through face-centered cubic aluminum.
DOI: 10.15468/xpwf68
title: projet de prolongation d'exploitation et de modification de remise en état d'une carrière par remblayage partiel avec des matériaux inertes - Communes de Jumièges et Le Mesnil-sous-Jumièges - Chauves-souris - Points d'écoute

description: Listes des espèces de chauves-souris contactées grâce à des points d'écoute au niveau de l'aire d'étude rapprochée du projet de valorisation écologique du site de Jumièges par la création de 32 hectares de zones humides sur les communes de Jumièges et Le Mesnil-sous-Jumièges (76)
DOI: 10.18126/3a2c-lkac
title: Biomimetic Human Skin Model Patterned with Rete Ridges

description: Image data from Biomimetic human skin model patterned with rete ridges by Nagarajan et al., 2023. Data is organized by figure.
DOI: 10.18126/c9zx-r4gs
title: Control of lithium salt partitioning, coordination, and solvation in vitrimer electrolytes

description: Structures for  polyethylene oxide (PEO) molecules (repeating units 2, 4, and 6) with a vinylogous urethane cross linker. Pre-relaxed and relaxed structures are provided. A Li+ ion is placed along different sites of the polymer backbone to calculate the binding energies at different oxygen sites.
DOI: 10.15468/jxna3w
title: Parc Eolien de la Coutancière - Inventaire Chiroptères au sol

description: Expertises chiroptérologique réalisée au sol en 2015
DOI: 10.15468/gpfkes
title: Suivi mortalité et activité chiroptérologique (2021) - Parc éolien du Paradis

description: Suivi de la mortalité des Oiseaux et des Chiroptères Suivi chiroptérologique à hauteur de nacelle
DOI: 10.15468/t845zb
title: Projet éolien des Portes du Porcien - chiro hauteur

description: ecoutes chiroptérologiques en hauteur du projet éolien des portes du porcien.
DOI: 10.18126/v84f-we14
title: Accelerated Multimodal Characterization of Ni and Ni-Fe Electrodeposited Films

description: This dataset constitutes the output from a novel workflow for accelerating the multimodal characterization of a combinatorial set of 915 electroplated Ni and Ni-Fe thin films, as outlined in accompanying paper “A Workflow for Accelerating Multimodal Data Collection for Electrodeposited Films.” Approximately four films were created for each unique set of process conditions. These process conditions span seven different chemical bath solutions (and one repeated solution with the addition of agitation), and current densities varied between 1 and 200 mA/cm^2. The in-situ voltage time series data for these electrodepositions is included to capture process information. Six characterization modalities are represented: X-ray diffraction, X-ray fluorescence, nanoindentation, optical microscopy, laser profilometry, and tribological (friction and wear) testing.

We acknowledge the Laboratory Directed Research and Development program for providing funding for this study. This work was performed, in part, at the Center for Integrated Nanotechnologies, an Office of Science User Facility operated for the U.S. Department of Energy (DOE) Office of Science. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.
DOI: 10.18126/tacz-v14v
title: Simulated Vibrational Density of States and X-ray Diffraction Profiles of Mechanically Deformed and Disordered Atomic Structures in Gold, Iron, Magnesium, and Silicon

description: Raw molecular dynamics (LAMMPS) dump files, X-ray diffraction (XRD) compute outputs, and text files containing velocity autocorrelation function (VACF) measurements, computed vibrational density of states (VDoS) profiles, and microstructural descriptors of the dump files.
Data was collected using the molecular dynamics code LAMMPS from simulations of bulk silicon, gold, magnesium, and iron with and without disorder insertion and with and without mechanical loading.
A portion of the Si data provided in this dataset was used for a previous publication (10.1021/acs.chemmater.2c03207).
DOI: 10.18126/h2vw-rrzu
title: PyEBSDIndex Demo

description: Data used to demonstrate PyEBSDIndex, a electron backscattered diffraction (EBSD) indexing algorithm.  Jupyter notebooks are included to create simulated patterns of known orientation with varying levels of noise, which then can be indexed, with the index orientation compared to the simulated orientation.  Additionally, a test Ti64 dataset is included, with a Jupyter notebook, that is used to demonstrate typical usage of PyEBSDIndex.
DOI: 10.18126/csff-i4um
title: Raw data set for LYC paper

description: Raw dataset for LYC paper
DOI: 10.15468/v95gke
title: opération d'aménagement "Les Boutiques du Chaudron" - DEPOBIO_OCIDIM_CONSTRUCTION_BOUTIQUES_FAUNE

description: Le jeux de données présente l'occurance d'une espèce de chauve-souris (Mormopterus francoismoutoui) contactée durant l'étude. Le fichier.csv comporte 9 colonnes renseignées avec : nomCite = nom de l'espèce, cdNom: code Taxref de l'espèce , dateDebut : date du début de l'observation , dateFin : date de fin de l'observation, observer : le nom et prénom de l'observateur, objDenbr : le type d'objet dénombré, geometrie : les coordonées GPS de la surface de prospection
DOI: 10.18126/s9fs-ob68
title: CIF files of isolated nanothreads formed by furan and thiophene derivatives

description: DFT simulations of isolated furan-based and thiophene-based nanothreads; structure CIF files and energy txt files;
DOI: 10.18126/m28k8m
title: Database-driven Materials-selection Framework for Semiconductor Heterojunction Design
DOI: 10.13140/rg.2.2.11543.34726
title: Why GPT-Based Chatbots Will Be Vital: Applications, Challenges, and the Shaping of the Fragile Job Market (chapter 1)
DOI: 10.18126/p8jh-shxc
title: Effect of material extrusion additive manufacturing process parameters on cross-sectional geometry, fracture behavior, and mechanical properties for polycarbonate

description: Material extrusion additive manufacturing of polycarbonate, including tensile properties, cross-sectional microscopy, and fracture surfaces for single road width boxes printed with different print speeds, layer times, and extrusion temperatures.
DOI: 10.15468/z2vb76
title: EDPR FRANCE HOLDING - Parc Eolien de Marcheville - [SUIVI] Suivi post-implantation pour Marchéville (nacelle)

description: Suivi post-implantation en nacelle pour le parc éolien de Marchéville
DOI: 10.13140/rg.2.2.24965.12007
title: Why GPT-Based Chatbots Will Be Vital: Applications, Challenges, and the Shaping of the Fragile Job Market (chapter 1)
DOI: 10.18126/ckt2-g8j2
title: Prognosis of Multivariate Battery State of Performance and Health via Transformers - Data

description: This dataset contains the processed files required to reproduce results in the Prognosis of Multivariate Battery State of Performance and Health via Transformers work. CSV files are included for a lithium-iron-phosphate fast charging dataset and a six cathode chemistry (HE5050, 5VSpinel, NMC111, NMC532, NMC622, NMC811) cycling dataset.
DOI: 10.15468/rp2b5n
title: SOCPE DE LA MARDELLE - [SUIVI] Suivi post-implantation pour la Mardelle (nacelle)

description: Suivi post-implantation en nacelle pour le parc éolien de la Mardelle
DOI: 10.18126/62wr-j188
title: Minimal Molecular Building Blocks for Screening in Quasi-Two-Dimensional Organic–Inorganic Lead Halide Perovskites

description: Inputs for Quantum Espresso and BerkeleyGW to compute the bandstructures mentioned in "Minimal Molecular Building Blocks for Screening in Quasi-Two-Dimensional Organic–Inorganic Lead Halide Perovskites", for full calculations and calculations with IPSA-2C.
DOI: 10.18126/m2dk97
title: Dataset for A New Generation of Effective Core Potentials for Correlated Calculations

description: Dataset includes all input and output files of calculations performed in the work "A new generation of effective core potentials for correlated calculations" as well as effective core potentials and correlation consistent basis sets generated in the study.
DOI: 10.18126/6oby-l2lp
title: Data sets for "Charge-spin susceptibility as a useful probe of electronic correlations in quantum materials"

description: Data files and plotting scripts used to calculate the charge-spin susceptibility of a set of layered materials (with 2D arrays of transition metal atoms).
DOI: 10.18126/xv6r-y3lr
title: Experimental data for evaluation of deep learning approach for high-accuracy electron counting of MAPS-type direct electron detectors

description: Experimental data of Celeritas XS direct detector for evaluation of deep learning counting approach as well as conventional connected component labeling counting and integrating. The dataset contains uniformly illuminated data with and without beam stop for MTF/DQE/DCE calculation, 4DSTEM datasets of monolayer WS2 before and after counting, and 4DSTEM datasets of SrTiO3[100] before and after counting. The zspy files can be loaded using Hyperspy(https://hyperspy.org)
DOI: 10.15468/cpjjez
title: Parc éolien des taillades - Suivi des chiroptères en nacelle 2021 - TAIL

description: Suivi des chiroptères en nacelles sur le parc éolien de Taillades
DOI: 10.6084/m9.figshare.22982309
title: The effect of dexmedetomidine on expression of neuronal nitric oxide synthase in spinal dorsal cord in a rat model with chronic neuropathic pain

description: Abstract Background Neuropathic pain typically refers to the pain caused by somatosensory system injury or diseases, which is usually characterized by ambulatory pain, allodynia, and hyperalgesia. Nitric oxide produced by neuronal nitric oxide synthase (nNOS) in the spinal dorsal cord might serve a predominant role in regulating the algesia of neuropathic pain. The high efficacy and safety, as well as the plausible ability in providing comfort, entitle dexmedetomidine (DEX) to an effective anesthetic adjuvant. The aim of this study was to investigate the effect of DEX on the expression of nNOS in spinal dorsal cord in a rat model with chronic neuropathic pain. Methods Male Sprague Dawley (SD) rats were randomly assigned into three groups: sham operation group (sham), (of the sciatic nerve) operation (CCI) group, and dexmedetomidine (DEX) group. Chronic neuropathic pain models in the CCI and DEX groups were established by sciatic nerve ligation. The thermal withdrawal latency (TWL) was measured on day 1 before operation and on day 1, 3, 7 and 14 after operation. Six animals were sacrificed after TWL measurement on day 7, and 14 days after operation, in each group, the L4–6 segment of the spinal cords was extracted for determination of nNOS expression by immunohistochemistry. Results Compared with the sham group, the TWL threshold was significantly decreased and the expression of nNOS was up-regulated after operation in the CCI and DEX groups. Compared with the CCI grou[, the TWL threshold was significantly increased and the expression of nNOS was significantly down-regulated on day 7 and 14 days after operation in the DEX group. Conclusion Down-regulated nNOS in the spinal dorsal cord is involved in the attenuation of neuropathic pain by DEX.