cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26793067.v1
title: p9 peptide simulation data. Dataset includes imaged trajectory files for the five Pep-GaMD simulations runs. We have also provided the topology and the pdb file.

description: Insights into the structural dynamic mechanism of PC1 activation by TA peptide agonists p9, p17 and p21 to provide an in-depth understanding that will facilitate development of therapeutics targeting PC1 for ADPKD by targeting PC1treatment.
DOI: 10.6084/m9.figshare.1067047.v2
title: Emissivity of LaB6 at 1622K from 550 nm to 2400 nm.

description: Emissivity of LaB6 at 1622K from 550 nm to 2400 nm. For a paper describing the acquisition of this data see: J. M. D. Kowalczyk, M. R. Hadmack, E. B. Szarmes, and J. M. J. Madey. Emissivity of Lanthanum<br>Hexaboride Thermionic Electron Gun Cathode. International Journal of Thermophysics, 35(8):1538–<br>1544, Aug. 2014. doi:10.1007/s10765-014-1712-3.
DOI: 10.6084/m9.figshare.19913230.v1
title: turbulentMomentField_spatialData_p3

description: The folder contains 13 moment data along the wall-normal direction (in the order: position, density, temperature, pressure, streamwise velocity, wall normal velocity, spanwise velocity, sigmaXX, sigmaYY, sigmaZZ, sigmaXY, sigmaYZ, sigmaZX, qX, qY, qZ) at every point in the domain and is used for spatial averaging.
DOI: 10.6084/m9.figshare.21637559.v2
title: E$$ENTIAL MEDICINE$ Challenge Database_Pilot_29 Nov 2022

description: This is a pilot of the database that conbined all the data collected from the News Flash, Price Hike$ and Cirlce of LIfe challanges of E$$ENTIAL MEDICINE$. <br> It was designed by students at the University of Sydney.
DOI: 10.6084/m9.figshare.28768049.v3
title: Data and R Code in<i>"</i><b><i>Community functional traits shift under long-term nitrogen addition: Roles of intraspecific trait variability and species turnover</i></b><i>"</i>

description: This dataset contains raw and processed data, along with R scripts used to generate Figures 1–6 in the manuscript titled <i>"</i><b><i>Community functional traits shift under long-term nitrogen addition: Roles of intraspecific trait variability and species turnover</i></b><i>"</i>. The study explores the trait-based responses of plants to nitrogen addition, using linear regression models, structural equation modeling, and Sum of squares decomposition analysis. Each figure is associated with a dataset (<code>.xlsx</code>) and corresponding R script(s) for full reproducibility.
DOI: 10.17632/fx3vd2tgcf
title: Data for: Putative past, present, and future spatial distributions of deep-sea coral and sponge microbiomes revealed by predictive models

description: This dataset includes output rasters of the spatio-temporal model presented in Busch et al. 2024 (Data folder 1) giving cumulative microbial richnesses in deep-sea sponges and corals for the present, and two future scenarios. We also provide point data on the environmental variables used in our predictions (Data file 2): Depth, Slope, Bottom Stress (“BtmStress”), Bottom Current Speed (“BtmCur”), Mixed Layer Depth (“MLD”), Bottom Salinity (“BtmSal”), Sea Surface Salinity (“SSS”), Sea Surface Temperature (“SST”), and Bottom Temperature (“BtmTmp”) averaged for each of the seven time periods (extracted from the Simple Ocean Data Assimilation, SODA, for the past periods 1871-1900, 1901-1930, 1931-1960, 1961-1989; extracted from the BNAM Ocean Model for the present period 1990-2015 and for the future periods 2046-2065 and 2066-2085 under a RCP8.5 scenario). This dataset also contains raw occurrence data compiled from different indicated sources (Data file 3), and presence/absence data (true absences as well as pseudo absences) gridded to be used as model input (Data file 4) of the analysed host species Weberella bursa, Stryphnus fortis, Lophelia pertusa, Desmophyllum dianthus, and Vazella pourtalesii. Another data file (Data file 5) contains an overview of the ENA (European Nucleotide Archive) accession numbers, the original literature sources, and some basic ecological metadata of the used microbial data (16S amplicon data) drawn from the host species. After assigning the microbial abundance status (HMA – high microbial abundance, and LMA – low microbial abundance) to ten key sponge species in the Flemish Cap area area (Asconema foliatum, Geodia barretti, Geodia macandrewii, Geodia parva-phlegraei, Mycale lingua, Stelletta normani, Stryphnus fortis, Stylocordyla borealis, Tentorium semisuberites, and Weberella bursa) we correlated our spatial predictions of status occurrence with predictions of overall ecosystem function, i.e. here nutrient cycling and habitat provision (derived from Murillo et al. 2020, Diversity and Distributions). For our study the original rasters (created by Murillo et al. 2020) were resampled to a 0.088 cell size using Bilinear interpolation as the resampling technique in ArcGIS Pro. Data 6 contains the resampled predictions of overall ecosystem function, as well as our predicted occurrences of the HMA and LMA status, and the respective summed biomasses. In our article (above) we show a biomass network, integrating the generated information on HMA and LMA sponge biomasses with biomass measurements of other sessile filter feeding invertebrates, which occur in high abundances at the Flemish Cap (data taken from Murillo et al. 2020, Diversity and Distributions). Data file 7 contains the underlying biomass data used for the network, covering 116 different species, which are classified according to size (small, medium, medium large, large), functional (passive “PFF”, and active “AFF” filter feeders) and taxonomic (8 phyla) groups.
DOI: 10.6084/m9.figshare.21441711.v1
title: Determination of Loyalty among High School Students to Retain in the Same University for Higher Education.xlsx

description: The raw data of a paper entitled "Determination of Loyalty among High School Students to Retain in the Same University for Higher Education: An Integration of Self-Determination Theory and Extended Theory of Planned Behavior"
DOI: 10.6084/m9.figshare.21629633.v1
title: SDL-PAND model 2.11

description: The model 2.11 of SDL-PAND project that incorporates the vaccination process, the confinement, the detection rate, the reinfections, allowing us to understand the effects of the NPIs in the disease's containment and forecast the trend of the pandemic.
DOI: 10.6084/m9.figshare.28877525.v1
title: test data

description: The DOI becomes active when the item is
DOI: 10.6084/m9.figshare.22203787.v1
title: Constant temperature and fluctuating temperature have distinct effects on hypoxia tolerance in killifish (Fundulus heteroclitus)

description: Source data for manuscript submitted to Journal of Experimental Biology entitled <em>Constant temperature and fluctuating temperature have distinct effects </em> <em>on hypoxia tolerance in killifish (Fundulus heteroclitus). </em>
DOI: 10.6084/m9.figshare.11864493.v1
title: Supplementary Material for: Effectiveness of an Adjunctive Psychotherapeutic Intervention Developed for Enhancing the Placebo Effect of Antidepressants Used within an Inpatient-Treatment Program of Major Depression: A Pragmatic Parallel-Group, Randomized Controlled Trial

description: Medicine
DOI: 10.6084/m9.figshare.23052875.v1
title: Supplementary Material for: MRI-Induced Neurosensory Events in Decorative Black Tattoos: Study by Advanced Experimental Methods

description: Adverse reactions in tattooed skin during magnetic resonance imaging (MRI) are rare but well known. Previous reports describe sudden burning pain in tattooed skin, sometimes accompanied by mild erythema and oedema when entering MRI scanners. The pathophysiology remains unclear, but simple direct thermal heating can be excluded. It has been hypothesized that MRI-triggered torque and traction create neural sensations from magnetic pigment particles. However, this case enlightens yet another possible mechanism. We present a 35-year-old woman experiencing reoccurring stinging sensations in three decorative black tattoos just seconds after the initiation of the MRI. Single-blind tests with handheld power magnets or a dummy could reproduce painful subjective feelings in her tattooed skin. Similar events were provoked during re-evaluation with MRI. Surprisingly, chemical analyses and electron microscopy of skin samples revealed carbon black as the colouring agent – no iron-based solids were detected. Our case demonstrates that MRI tattoo reactions are not limited to magnetic contaminants alone. More distinct subgroups of MRI-induced reactions may occur. We hypothesize that radiofrequency induction of surface currents in black carbon particles adjacent to sensory axons in the dermis may lead to neurosensations.
DOI: 10.6084/m9.figshare.26402761.v1
title: <b>Development and Validation of Interpretable Machine Learning Models for Triage Patients Admitted to the Intensive Care Unit</b>

description: <b>Objectives:</b> Developing and validating interpretable machine learning (ML) models for predicting whether triaged patients need to be admitted to the intensive care unit (ICU).<b>Measures:</b> This was a single-center, retrospective study. Emergency Severity Index (ESI), vital signs, demographic characteristics, history, and chief complaints of triaged patients were extracted from the Medical Information Mart for Intensive Care IV database, and the predicted outcome was admission to the ICU.Three models were compared: Model 1 based on ESI, Model 2 on vital signs, and Model 3 on vital signs, demographic characteristics, medical history, and chief complaints. Nine ML algorithms were employed. The area under the receiver operating characteristic curve (AUC), Matthews correlation coefficient (MCC), learning curves, recall curves, calibration curves, and decision curves analysis were used to evaluate the performance of the models.
DOI: 10.6084/m9.figshare.27778713.v1
title: Tourism

description: Data
DOI: 10.15468/dl.9cjvu5
title: Occurrence Download

description: A dataset containing 210 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Barbourula busuangensis Taylor & Noble, 1924"
 ]
}

 The dataset includes 210 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009372-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24433726.v1
title: Supplementary Material for: FTO genotypes (rs9939609 T&gt;A) are associated with increased added sugar intake in healthy young adults

description: Introduction: Single-nucleotide polymorphism (SNP) rs9939609 in the FTO gene has been associated with dietary intake and appetite traits mainly in participants with obesity, however it remains widely unexplored in normal weight participants. Thus, the aims of this study were 1) to compare the changes in subjective appetite sensations, ghrelin, and insulin concentrations according to the SNP rs9939609 T&gt;A in FTO and 2) to compare dietary intake between rs9939609 genotype groups in normal weight young participants. Methods: We conducted a quasi-experimental study involving 88 normal-weight participants to analyze subjective perception of appetite, hormonal response for hunger and satiety, and dietary intake according to the rs9939609 SNP. Participants received a standardized single breakfast. Visual Analogue Scales (VAS) were utilized for assessing the subjective perception of appetite at fasting and immediately after breakfast and at 30, 60, 90, and 120 minutes postprandially. Glucose, lipid profile, ghrelin, and insulin were measured at fasting and at 120 minutes after breakfast. Dietary intake was assessed with a 3-day food record. The SNP was determined by allelic discrimination with TaqMan probes. To compare dietetic, biochemical, and the subjective appetite sensations, Student T test, ANCOVA test, and the repeated measures ANOVA were used. The linear regression model and the linear mixed model were used for the association analysis. Pearson correlation was used to test the correlation between two quantitative variables. Results: A total of 88 people participated, 81.8% were female, with a mean BMI of 21.8 ± 2.0 kg/m2 and a mean age of 20.6 ± 2.0. Genotype frequencies of the rs9939609 SNP were 52 % for the TT allele and 48 % for the TA/AA. The subjective perception of appetite named hunger, fullness, satiety, desire to eat, and prospective food consumption were similar between genotypes of the rs9939609. Participants with the TA/AA genotype showed a higher intake of added sugar (p=0.039) than TT participants. No differences were found in ghrelin, insulin, glucose, or lipid parameters between genotypes. Conclusion: Carriers of the A allele from FTO gene SNP rs9939609 may have an increased preference for foods, specifically for added sugars.
DOI: 10.6084/m9.figshare.27191613.v1
title: Additional file 2 of Personal values clusters and their associations to social media behaviors and psychological well-being

description: Supplementary Material 2.
DOI: 10.17632/h8vg9w9ht5
title: School Atlas Survey

description: The dataset contains the responses of 603 Czech teachers about the importance and use of school world atlases in their geography classes. The dataset is an export from JotForm. All the responses are in the Czech language + machine translation using Google Translator. Alternatively, the data can be interactively inspected using Fluorish. Most of the teachers who completed the questionnaire worked at primary schools (487 teachers). A total of 116 respondents taught in secondary schools and grammar schools. The total number of all Czech geography teachers is not available. Based on the number of schools in the Czech Republic, the authors estimated that the questionnaire was filled in by approximately 15% of geography teachers in the Czech Republic. The questionnaire survey contained a total of 30 questions focused on four main areas. Three areas are associated with the proposed research questions: which atlases are used in teaching and their importance; the types of task students solve with them; other teaching aids the teachers use.
DOI: 10.6084/m9.figshare.12826823.v1
title: Supplementary Material for: Short-Term Intravenous Infusion of Cyclophosphamide in the Treatment of Refractory Pemphigus Vulgaris: A Retrospective Study

description: <b><i>Background:</i></b> Pemphigus is an autoimmune disease of the skin and mucous membranes. Glucocorticoids have been the most effective drug for the treatment of pemphigus; however, some patients are insensitive to glucocorticoid therapy. Cyclophosphamide has been extensively used in the treatment of pemphigus. <b><i>Objectives:</i></b> To observe and evaluate the efficacy and safety of high-dose glucocorticoid with weekly intravenous cyclophosphamide in the treatment of refractory pemphigus vulgaris insensitive to glucocorticoids. <b><i>Methods:</i></b> Clinical data of 19 patients with refractory pemphigus vulgaris (insensitive to glucocorticoid) who were treated with high-dose glucocorticoids(1.5 mg/kg/day prednisone) and weekly intravenous infusion of cyclophosphamide, and 24 patients who were sensitive to glucocorticoid therapy received a medium dose of glucocorticoid alone (1 mg/kg/day prednisone) were retrospectively analyzed. <b><i>Results:</i></b> By the time the disease was brought under control, the average total dose of cyclophosphamide was 2.02 g. Comparison between the glucocorticoid-insensitive and glucocorticoid-sensitive groups showed that the average time to disease control was 2.68 vs. 2 weeks, and the average daily dosage of steroid was 1.33 ± 0.53 vs. 0.90 ± 0.28 mg/kg. At the 12- and 18-month follow-ups, the recurrence rate of the glucocorticoid-insensitive group was significantly lower than that of the sensitive group (5.3 vs. 37.5%, 15.8 vs. 45.8%). No serious adverse reactions were observed. <b><i>Conclusion:</i></b> High-dose glucocorticoid plus weekly intravenous infusion of cyclophosphamide safely, effectively, and rapidly controlled the conditions of the patients with refractory pemphigus who were insensitive to glucocorticoids, shortened the duration of hospitalization, avoided the risk of complications that could be caused by further increasing the dose of glucocorticoids (&gt;1.5 mg/kg/day), and lowered the recurrence rate within 18 months.
DOI: 10.6084/m9.figshare.24998723.v1
title: Supplementary Material for: Blood eosinophil count and its determinants in a Chinese population-based cohort

description: Introduction: Blood eosinophil count has been shown markedly variable across different populations. However, its distribution in Chinese general population remains unclear. We aimed to investigate blood eosinophil count and its determinants in a Chinese general population.

Methods: In this population-based study, general citizens of Sichuan province in China were extracted from the China Pulmonary Health study. Data on demographics, personal and family history, living condition, lifestyle, spirometry and complete blood count test were obtained and analyzed. A stepwise multivariate binary logistic regression analysis was performed to identify determinants of high blood eosinophils (&gt;75th percentile).

Results: A total of 3310 participants were included, with a mean age (SD) of 47.0 (15.6) years. In total population, the median blood eosinophil count was 110.0 (IQR 67.2-192.9) cells/μL, lower than that in smokers (133.4 cells/μL, IQR 79.3-228.4) and patients with asthma (140.7 cells/μL, IQR 79.6-218.2) or post-bronchodilator airflow limitation (141.5 cells/μL, IQR 82.6-230.1), with a right-skewed distribution. Multivariate analyses revealed that oldness (aged ≥60 years) (OR 1.66, 95% CI 1.11-2.48), smoking ≥ 20 pack-years (OR 1.90, 95% CI 1.20-3.00), raising dog/cat (OR 1.72, 95% CI 1.17-2.52) and occupational exposure to dust, allergen and harmful gas (OR 1.58, 95% CI 1.15-2.15) were significantly associated with high blood eosinophils.

Conclusion: This study identifies a median blood eosinophil count of 110.0 cells/μL and determinants of high blood eosinophils in a Chinese general population, including oldness (aged ≥60 years), smoking ≥ 20 pack-years, raising dog/cat and occupational exposure to dust, allergen and harmful gas.
DOI: 10.6084/m9.figshare.23661798.v5
title: Data for the microgrid at Shoals Marine Laboratory, Appledore Island, Maine

description: Appledore Island, ME, USA, Microgrid Modeling and Optimization
DOI: 10.17632/nw2kwsfz6m
title: Lutz-Wahl et al. 2024 JDS_Supplements

description: These are the Supplements to the manuscript "A new beta-galactosidase from Paenibacillus wynnii with potential for industrial applications"
DOI: 10.6084/m9.figshare.11618256.v1
title: Supplementary Material for: Family History of Alcohol Abuse Associated with Higher Impulsivity in Patients with Alcohol Use Disorder: A Multisite Study

description: <b><i>Background:</i></b> Alcohol use disorder (AUD) is to a high degree heritable, and in clinical practice it is common to assert presence of alcohol abuse family history (FH) in treatment-seeking AUD patients. Patients with AUD also exhibit cognitive deficits, including elevated impulsivity and impairments in executive functions (EF), but less is known regarding the relation between FH and these cognitive domains. The aim of the current study was to investigate if alcohol abuse FH in AUD patients is associated with a specific cognitive profile. <b><i>Methods:</i></b> Patients with AUD (<i>n</i> = 197) from Sweden (<i>n</i> = 106) and Belgium (<i>n</i> = 91) were recruited. Self-rated impulsivity was assessed by the Barratt Impulsiveness Scale (BIS). EF assessed were response inhibition (stop signal task), attention (rapid visual processing task), and working memory (digit span). A series of linear regression models were run to explore the effect of FH on cognitive outcomes. <b><i>Results:</i></b> A FH of alcohol abuse was associated with elevated score in self-rated impulsivity assessed by the BIS, with the greatest effect on the subscale of nonplanning. There was no statistically significant association between FH and any of the other neuropsychological task outcomes. <b><i>Conclusion:</i></b> Presence of alcohol abuse FH within AUD patients could be a marker of higher impulsivity, which may have clinical implications regarding diagnostic evaluation and treatment.
DOI: 10.6084/m9.figshare.17087492.v1
title: Community Health Workers Questionnaire.pdf

description: This questionnaire was used to interview and collect information from community health workers about their understanding of obstetric fistula and the efforts put in place to address the issue.
DOI: 10.6084/m9.figshare.5242021.v1
title: Erratum: Atorvastatin Protects Myocardium Against Ischemia-Reperfusion Injury Through Inhibiting miR-199a-5p

description: <b><i>Objective: </i></b>This study aimed to evaluate the protective effects of atorvastatin against myocardial ischemia/reperfusion (I/R) injury in cardiomyocytes and its possible underlying mechanism. <b><i>Method</i></b><b><i>: </i></b>Direct cytotoxic effect of OGD/R on cardiomyocytes with and without atorvastatin pretreatment was evaluated. Effects of atorvastatin on expression of GSK-3β and miR-199a-5p were determined using RT-PCR and Western blot. In addition, GSK-3β expression with miR-199a-5p upregulation and downregulation was detected using RT-PCR, Western blot, and immunohistochemistry. <b><i>Results</i></b><b><i>: </i></b>Pretreatment with atorvastatin significantly improved the recovery of cells viability from OGD/R (p&lt;0.05). In addition, the atorvastatin pretreatment significantly increased GSK-3β expression both in mRNA level and protein level and decreased miR-199a-5p expression in mRNA level (p&lt;0.05). Upregulation and downregulation of miR-199a-5p respectively decreased and increased GSK-3β expression both in mRNA level and protein level. <b><i>Conclusion</i></b><b><i>: </i></b>These results suggested that atorvastatin provides the cardioprotective effects against I/R injury via increasing GSK-3β through inhibition of miR-199a-5p.