cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13018/bmr16127
title: Solution Structure of the SAP30 zinc finger motif
DOI: 10.13018/bmr16129
title: The NMR structure of the TC10 and Cdc42 interacting domain of CIP4
DOI: 10.6084/m9.figshare.31420724
title: Lentiviral single-cell MPRA of synthetic enhancers in hematopoiesis

description: <br>R data objects associated with Rühle et al., biorxiv 2026. Three enhancer libraries (PoC, alpha, beta) were screened by single cell MPRA in primary hematopoeitic stem and progenitor cells (HSPCs). Library PoC was also screened in K562 cells.<b>Seurat objects (targeted gene expression data)</b>integrated_seurat.rds : Integrated gene expression data for the HSPC screens of library alpha and beta. Metdata column <i>experiment</i> indicates which library was used. <i>final_annotation</i> contains final cell type/cell state annotation. <i>SCT_snn_res.*</i> columns contain different clustering resolutions. In the correlation-based analyses from the manuscript, resolution SCT_snn_res.2 was used.libPoC_hsc_seurat.rds : Gene expression data for the HSPC screen of library PoClibPoC_k562_seurat.rds : Gene expression data for the K562 screen of library PoC<b>Enhancer activity data</b>Data frames containing, for each observed combination of presence barcodes (<i>guide_id</i>) and cell (<i>cell</i>), information on the UMI count of the detection barcode (<i>guide_count</i>), the UMI count of the quantification barcode (<i>gfp_count</i>). Entries in the <i>cell</i> column correspond to column names of the Seurat objects. Additionally, contains information on the enhancer including the sequence, a sequence ID (<i>CRS</i>), and several column describing the sequence design, such as the identities of the transcription factors used (<i>TF.1, TF.2</i>), their affinity, number of repeats, spacing, etc., and a systematic text description of the design (<i>Seqname</i>)libAlpha_matched_gfp_guide_enhancer_counts.rdslibBeta_matched_gfp_guide_enhancer_counts.rdslibPoC_hsc_gfp_guide_enhancer_counts.rdslibPoC_k562_gfp_guide_enhancer_counts.rds<br>
DOI: 10.6084/m9.figshare.31420724.v1
title: Lentiviral single-cell MPRA of synthetic enhancers in hematopoiesis

description: <br>R data objects associated with Rühle et al., biorxiv 2026. Three enhancer libraries (PoC, alpha, beta) were screened by single cell MPRA in primary hematopoeitic stem and progenitor cells (HSPCs). Library PoC was also screened in K562 cells.<b>Seurat objects (targeted gene expression data)</b>integrated_seurat.rds : Integrated gene expression data for the HSPC screens of library alpha and beta. Metdata column <i>experiment</i> indicates which library was used. <i>final_annotation</i> contains final cell type/cell state annotation. <i>SCT_snn_res.*</i> columns contain different clustering resolutions. In the correlation-based analyses from the manuscript, resolution SCT_snn_res.2 was used.libPoC_hsc_seurat.rds : Gene expression data for the HSPC screen of library PoClibPoC_k562_seurat.rds : Gene expression data for the K562 screen of library PoC<b>Enhancer activity data</b>Data frames containing, for each observed combination of presence barcodes (<i>guide_id</i>) and cell (<i>cell</i>), information on the UMI count of the detection barcode (<i>guide_count</i>), the UMI count of the quantification barcode (<i>gfp_count</i>). Entries in the <i>cell</i> column correspond to column names of the Seurat objects. Additionally, contains information on the enhancer including the sequence, a sequence ID (<i>CRS</i>), and several column describing the sequence design, such as the identities of the transcription factors used (<i>TF.1, TF.2</i>), their affinity, number of repeats, spacing, etc., and a systematic text description of the design (<i>Seqname</i>)libAlpha_matched_gfp_guide_enhancer_counts.rdslibBeta_matched_gfp_guide_enhancer_counts.rdslibPoC_hsc_gfp_guide_enhancer_counts.rdslibPoC_k562_gfp_guide_enhancer_counts.rds<br>
DOI: 10.13018/bmr16130
title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for colicinN Tdomain residues 40-76 in complex with unlabbeled TolAIII
DOI: 10.13018/bmr16131
title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for the Colicin N Tdomain residues 40-76
DOI: 10.13018/bmr16133
title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for TolAIII residues 296-421
DOI: 10.13018/bmr16134
title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for tolaIII residues296-421in complex with unlabelled colicin N Tdomain
DOI: 10.13018/bmr16135
title: Sequence-specific 1H, 15N, and 13C resonance assignments of the 23.7 kDa homodimeric toxin CcdB from Vibrio fischeri.
DOI: 10.13018/bmr16136
title: NMR assignment of jerdostatin from Trimeresurus jerdonii
DOI: 10.13018/bmr16137
title: NMR structure of the first SAM domain from AIDA1
DOI: 10.13018/bmr16138
title: NMR solution structure of metal-modified DNA
DOI: 10.13018/bmr16139
title: NMR solution structure of the CASKIN SH3 domain
DOI: 10.13018/bmr16140
title: [Sec13,Sec14]-kappa-hexatoxin-Hv1c
DOI: 10.15468/dl.humdsm
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyclemys oldhami"
 ]
}

 The dataset includes 245 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003109-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr16141
title: NMR solution structure of the HACS1 SH3 domain
DOI: 10.13018/bmr16142
title: Structure of SDF-1/CXCL12
DOI: 10.15468/dl.mztfeh
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyclemys pulchristriata"
 ]
}

 The dataset includes 57 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003108-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kmxx7f
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dehaasia acuminata"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003112-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr16143
title: Structure of SDF-1/CXCL12
DOI: 10.15468/dl.62w6rn
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "DistanceFromCentroidInMeters is greater than or equal to 2000",
 "Geometry POLYGON ((105.610544 14.999999, 179.999961 14.999999, 179.999961 65.08290100000001, 105.610544 65.08290100000001, 105.610544 14.999999))",
 "TaxonKey is Osteomugil engeli"
 ]
}

 The dataset includes 49 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003110-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr16144
title: Backbone and side chain 1H, 13C, and 15N NMR assignments for the organichydroperoxide resistance protein (Ohr) from Burkholderia pseudomallei, SeattleStructural Genomics Center for Infectious Disease (SSGCID) target BupsA.00074
DOI: 10.13018/bmr16145
title: Structure of SDF-1/CXCL12
DOI: 10.13018/bmr16146
title: Backbone resonance assignment of Staphylococcal Enterotoxin H
DOI: 10.13018/bmr16147
title: NMR assignments of oxidised thioredoxin from Plasmodium falciparum
DOI: 10.15468/dl.d2gqev
title: Occurrence Download

description: A dataset containing 339 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Thailand",
 "Geometry POLYGON((102.11332 12.58779,102.13843 12.58779,102.13843 12.62903,102.11332 12.62903,102.11332 12.58779))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 339 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003111-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr16148
title: NMR structure of Plantaricin K in DPC-micelles
DOI: 10.13018/bmr16149
title: Plantaricin K in TFE
DOI: 10.13018/bmr16150
title: NMR assignment of jerdostatin mutant R24K from Trimeresurus jerdonii
DOI: 10.13018/bmr16151
title: NMR assignment of jerdostatin from Trimeresurus jerdonii, with deletion of two residues (N45 G46) from the C-terminal end
DOI: 10.13018/bmr16152
title: NMR assignment of jerdostatin mutant R24K from Trimeresurus jerdonii, with deletion of two residues (N45 G46) from the end C-terminal
DOI: 10.13018/bmr16153
title: Structure of the transcription repressor SvtR08 (gp08) from the hyperthermophilic archaeal virus SIRV1
DOI: 10.13018/bmr16154
title: Solution NMR structure of the OB domain (residues 67-166) of MM0293 from Methanosarcina mazei. Northeast Structural Genomics Consortium target MaR214a.
DOI: 10.5281/zenodo.18782523
title: Cat Welfare and Management- RSPCA Australia & Animal Welfare Victoria (2023/2024).

description: This dataset contains aggregated welfare outcome data pertaining to cats in the Victorian animal welfare system. The dataset contains animal welfare and management data compiled from publicly available sources (RSPCA Australia National Statistics Reports (22/23 and 23/24) and Animal Welfare Victoria 2023 and 2024 Combined Shelter and Pound datasets). This includes admissions, animal welfare outcomes, rehoming and euthanasia (and the reasons for). The dataset covers multiple reporting years and has been combined for exploration and analysis. The variables examined are intake figures, outcome proportions (calculated as rates) and reasons for euthanasia.  

The intended use for this dataset is to extend exploratory analysis and discussion relevant to cat welfare in Australia. 

Data were manually extracted from annual reports and represented in a single dataset for visualisation purposes. 
description: Limitations of the data: This dataset includes variables reported using both financial and calendar years which limits direct comparison. The data are best suited to evaluation of broad change rather than specific comparisons.

Users of this dataset should interpret results cautiously and consider the above limits in their analysis.
DOI: 10.13018/bmr16155
title: Solution NMR structure of protein HS00059 from Homo Sapiens. Northeast Structural Genomics Consortium (NESG) target HT98A.
DOI: 10.5281/zenodo.18782522
title: Cat Welfare and Management- RSPCA Australia & Animal Welfare Victoria (2023/2024).

description: This dataset contains aggregated welfare outcome data pertaining to cats in the Victorian animal welfare system. The dataset contains animal welfare and management data compiled from publicly available sources (RSPCA Australia National Statistics Reports (22/23 and 23/24) and Animal Welfare Victoria 2023 and 2024 Combined Shelter and Pound datasets). This includes admissions, animal welfare outcomes, rehoming and euthanasia (and the reasons for). The dataset covers multiple reporting years and has been combined for exploration and analysis. The variables examined are intake figures, outcome proportions (calculated as rates) and reasons for euthanasia.  

The intended use for this dataset is to extend exploratory analysis and discussion relevant to cat welfare in Australia. 

Data were manually extracted from annual reports and represented in a single dataset for visualisation purposes. 
description: Limitations of the data: This dataset includes variables reported using both financial and calendar years which limits direct comparison. The data are best suited to evaluation of broad change rather than specific comparisons.

Users of this dataset should interpret results cautiously and consider the above limits in their analysis.
DOI: 10.13018/bmr16156
title: Solution Structure of the Coiled-coil Domain of Synphilin-1
DOI: 10.13018/bmr16157
title: alpha-amylase inhibitor Parvulustat (Z-2685) from Streptomyces parvulus
DOI: 10.13018/bmr16158
title: Beta1D Integrin Cytoplasmic Tail 1H and 15N Chemical Shift Assignments
DOI: 10.13018/bmr16159
title: Beta1A Integrin Cytoplasmic Tail 1H and 15N Chemical Shift Assignments
DOI: 10.13018/bmr16160
title: 1H, 13C, and 15N Chemical Shift Assignments for Myosin Phosphatase Trageting Subunit 1 (residues 1-98)
DOI: 10.13018/bmr16161
title: Solution NMR Structure of a domain from a Putative Phage Integrase Protein BF2284 from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR257C
DOI: 10.13018/bmr16162
title: Beta1D Integrin Cytoplasmic Tail (Polyhistidine-Tagged) 1H and 15N Chemical Shift Assignments
DOI: 10.13018/bmr16163
title: NMR structure of the N-terminal domain of kindlin1
DOI: 10.13018/bmr16164
title: Solution structure of XcpT, the main component of the type 2 secretion system of Pseudomonas aeruginosa
DOI: 10.15468/dl.hcymbf
title: Occurrence Download

description: A dataset containing 156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Squalius peloponensis)",
 "Geometry POLYGON((19.0 42.0, 19.0 34.5, 29.7 34.5, 29.7 42.0, 19.0 42.0))"
 ]
}

 The dataset includes 156 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003113-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr16165
title: 1H, 15N and 13C backbone resonance assignments of domain 2 (D2) of the non-structural 5A protein (NS5A) from the JFH1 Hepatitis C virus (HCV) strain.
DOI: 10.13018/bmr16166
title: 1H, 15N and 13C backbone resonance assignments of domain 3 of the non-structural 5A (NS5A) protein from Hepatitis C Virus (Con1)
DOI: 10.15468/dl.8b6mhq
title: Occurrence Download

description: A dataset containing 72032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Carex flacca",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 72032 records from 282 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003056-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc8050f
title: CCDC 238483: Experimental Crystal Structure Determination

description: Related Article: O.V.Ozerov, Chengyun Guo, V.A.Papkov, B.M.Foxman|2004|J.Am.Chem.Soc.|126|4792|doi:10.1021/ja049659l
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8051g
title: CCDC 238484: Experimental Crystal Structure Determination

description: Related Article: M.Kita, M.Kondo, T.Koyama, K.Yamada, T.Matsumoto, Kun-Hyung Lee, Je-Tae Woo, D.Uemura|2004|J.Am.Chem.Soc.|126|4794|doi:10.1021/ja049277f
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8053j
title: CCDC 238486: Experimental Crystal Structure Determination

description: Related Article: Do Hyun Ryu, Gang Zhou, E.J.Corey|2004|J.Am.Chem.Soc.|126|4800|doi:10.1021/ja049323b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8054k
title: CCDC 238487: Experimental Crystal Structure Determination

description: Related Article: Do Hyun Ryu, Gang Zhou, E.J.Corey|2004|J.Am.Chem.Soc.|126|4800|doi:10.1021/ja049323b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8055l
title: CCDC 238488: Experimental Crystal Structure Determination

description: Related Article: Do Hyun Ryu, Gang Zhou, E.J.Corey|2004|J.Am.Chem.Soc.|126|4800|doi:10.1021/ja049323b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8056m
title: CCDC 238489: Experimental Crystal Structure Determination

description: Related Article: Do Hyun Ryu, Gang Zhou, E.J.Corey|2004|J.Am.Chem.Soc.|126|4800|doi:10.1021/ja049323b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8057n
title: CCDC 238490: Experimental Crystal Structure Determination

description: Related Article: Do Hyun Ryu, Gang Zhou, E.J.Corey|2004|J.Am.Chem.Soc.|126|4800|doi:10.1021/ja049323b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8059q
title: CCDC 238492: Experimental Crystal Structure Determination

description: Related Article: V.Alezra, G.Bernardinelli, C.Corminboeuf, U.Frey, E.P.Kundig, A.E.Merbach, C.M.Saudan, F.Viton, J.Weber|2004|J.Am.Chem.Soc.|126|4843|doi:10.1021/ja0374123
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc805br
title: CCDC 238493: Experimental Crystal Structure Determination

description: Related Article: V.Alezra, G.Bernardinelli, C.Corminboeuf, U.Frey, E.P.Kundig, A.E.Merbach, C.M.Saudan, F.Viton, J.Weber|2004|J.Am.Chem.Soc.|126|4843|doi:10.1021/ja0374123
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc805cs
title: CCDC 238494: Experimental Crystal Structure Determination

description: Related Article: A.D.Bolig, E.Y.-X.Chen|2004|J.Am.Chem.Soc.|126|4897|doi:10.1021/ja031558k
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc805dt
title: CCDC 238495: Experimental Crystal Structure Determination

description: Related Article: A.D.Bolig, E.Y.-X.Chen|2004|J.Am.Chem.Soc.|126|4897|doi:10.1021/ja031558k
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc805fv
title: CCDC 238496: Experimental Crystal Structure Determination

description: Related Article: Wei Lu, Bao-Xiu Mi, M.C.W.Chan, Zheng Hui, Chi-Ming Che, Nianyong Zhu, Shuit-Tong Lee|2004|J.Am.Chem.Soc.|126|4958|doi:10.1021/ja0317776
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc805gw
title: CCDC 238497: Experimental Crystal Structure Determination

description: Related Article: Wei Lu, Bao-Xiu Mi, M.C.W.Chan, Zheng Hui, Chi-Ming Che, Nianyong Zhu, Shuit-Tong Lee|2004|J.Am.Chem.Soc.|126|4958|doi:10.1021/ja0317776
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc805hx
title: CCDC 238498: Experimental Crystal Structure Determination

description: Related Article: Wei Lu, Bao-Xiu Mi, M.C.W.Chan, Zheng Hui, Chi-Ming Che, Nianyong Zhu, Shuit-Tong Lee|2004|J.Am.Chem.Soc.|126|4958|doi:10.1021/ja0317776
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.