cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5501212
title: Investigating the neuroanatomical substrate of pathological laughing and crying in amyotrophic lateral sclerosis with multimodal neuroimaging techniques

description: <i>Objective</i>: Pathological laughing and crying (PLC) is common in several neurological and psychiatric diseases and is associated with a distributed network involving the frontal cortex, the brainstem and cortico-pontine-cerebellar circuits. By applying multimodal neuroimaging approach, we examined the neuroanatomical substrate of PLC in a sample of patients with amyotrophic lateral sclerosis (ALS). <i>Methods</i>: We studied 56 non-demented ALS patients and 25 healthy controls (HC). PLC was measured in ALS using the Center of Neurologic Study Lability Scale (CNS-LS; cutoff score: 13). All participants underwent 3D-T1-weighted and 30-directional diffusion-weighted imaging at 3T. Voxel-based morphometry and tract-based spatial-statistics analysis was used to examine gray matter (GM) and white matter (WM) differences between ALS patients with and without PLC (ALS-PLC and ALS-nonPLC, respectively). Comparisons were restricted to regions with detected differences between ALS and HC, controlling for age, gender, total intracranial volume and depressive symptoms. <i>Results</i>: In regions with significant differences between ALS and HC, ALS-PLC patients showed decreased GM volume in left orbitofrontal cortex, frontal operculum, and putamen and bilateral frontal poles, compared to ALS-nonPLC. They also had decreased fractional anisotropy in left cingulum bundle and posterior corona radiata. WM abnormalities were additionally detected in WM associative and ponto-cerebellar tracts (using a more liberal threshold). <i>Conclusions</i>: PLC in ALS is driven by both GM and WM abnormalities which highlight the role of circuits rather than isolated centers in the emergence of this condition. ALS is suggested as a useful natural experimental model to study PLC.
DOI: 10.6084/m9.figshare.5501212.v1
title: Investigating the neuroanatomical substrate of pathological laughing and crying in amyotrophic lateral sclerosis with multimodal neuroimaging techniques

description: <i>Objective</i>: Pathological laughing and crying (PLC) is common in several neurological and psychiatric diseases and is associated with a distributed network involving the frontal cortex, the brainstem and cortico-pontine-cerebellar circuits. By applying multimodal neuroimaging approach, we examined the neuroanatomical substrate of PLC in a sample of patients with amyotrophic lateral sclerosis (ALS). <i>Methods</i>: We studied 56 non-demented ALS patients and 25 healthy controls (HC). PLC was measured in ALS using the Center of Neurologic Study Lability Scale (CNS-LS; cutoff score: 13). All participants underwent 3D-T1-weighted and 30-directional diffusion-weighted imaging at 3T. Voxel-based morphometry and tract-based spatial-statistics analysis was used to examine gray matter (GM) and white matter (WM) differences between ALS patients with and without PLC (ALS-PLC and ALS-nonPLC, respectively). Comparisons were restricted to regions with detected differences between ALS and HC, controlling for age, gender, total intracranial volume and depressive symptoms. <i>Results</i>: In regions with significant differences between ALS and HC, ALS-PLC patients showed decreased GM volume in left orbitofrontal cortex, frontal operculum, and putamen and bilateral frontal poles, compared to ALS-nonPLC. They also had decreased fractional anisotropy in left cingulum bundle and posterior corona radiata. WM abnormalities were additionally detected in WM associative and ponto-cerebellar tracts (using a more liberal threshold). <i>Conclusions</i>: PLC in ALS is driven by both GM and WM abnormalities which highlight the role of circuits rather than isolated centers in the emergence of this condition. ALS is suggested as a useful natural experimental model to study PLC.
DOI: 10.6084/m9.figshare.5501188
title: Old Cluttersims at Icy Scarps Sites

description: If you are looking for data from Dundas et al. 2017, please refer to the fileset with doi number 10.6084/m9.figshare.5537893, found at https://doi.org/10.6084/m9.figshare.5537893.<br>The clutter simulations at the above link were all processed with the most recent version of the clutter simulator out of Dr. Jack Holt's group at UTexas and are aligned with the FPB processed U.S. SHARAD team data, which is publicly available on the PDS.<br>The dataset here contains a mix of clutter simulations that do not all align with the data on the PDS.<br>The HRSC-based clutter simulations here for scarp sites #1 and 5 (HRSC DTMs h2213_0000_dt4.img and h2587_0001_dt4.img, respectively) are the same as that in the other dataset. These were generated by Michael Christoffersen, who kindly ran code out of Dr. Jack Holt's group at UTexas to generate these products. These files are in the HRSC_Cluttersims folder.<br><br>The MOLA-based clutter simulations for scarp sites #1-7 were generated by CO-SHARPS (Colorado SHARAD Radar Processing System). These use the QDA processor and are not aligned with the data available on the PDS. More information about CO-SHARPS can be found at http://www.psi.edu/SHARAD.<br><br>The MOLA-based cluttersims for the two tracks that pass over Milankovic crater that are in this dataset were also generated by Dr. Holt's UTexas group but with an old version of the clutter simulation (from 2013) for analysis in the Bramson et al. 2015 GRL paper "Widespread excess ice in Arcadia Planitia, Mars" (doi:10.1002/2015GL064844).<br>The clutter simulations in this fileset are inconsistent in processing and so if you are here for the icy scarp sites of Dundas et al. 2017, please go to https://doi.org/10.6084/m9.figshare.5537893.
DOI: 10.6084/m9.figshare.5501125
title: rich-selenium.xlsx

description: The present study investigated the growth of <i>Pleurotus eryngii </i>var. <i>tuoliensis</i> mycelia in liquid culture, PDA culture and cultivation substrate with different concentrations of sodium selenite, as well as selenium enrichment and selenium speciation in the fruiting body. The results showed that the sensitivity of <i>P. eryngii </i>var. <i>tuoliensis</i> mycelia to selenium was divergent under different culture modes. The biomass of <i>P. eryngii</i> var. <i>tuoliensis</i> was significantly decreased in liquid culture medium with selenium. A relatively low concentrations of selenium (≤ 10 mg/L) promoted mycelia growth under plate culture. In the cultivation substrate, the mycelia grew normally at selenium concentrations of less than 300 mg/kg and reached the highest growth rate of 3.23 mm/d at a concentration of 40 mg/kg. A selenium concentration of 10 mg/kg promoted fruiting of <i>P. eryngii</i> var. <i>tuoliensis</i>; the fruiting bodies were of good quality and had a low malformation rate. However, a selenium concentration greater than 10 mg/kg led to reduced yield, shorter stipes, smaller caps and a higher deformity rate. In addition, the selenium enrichment coefficient of the fruiting bodies was 1.82-3.12, which was far higher than that of those from the control mycelia (0.29). LC-AFS showed that selenium in the fruiting body exists mainly in the form of selenite, SeCys, Met-SeCys and SeMet. These findings suggest that <i>P. eryngii</i> var. <i>tuoliensis</i> could be developed as a selenium-rich mushroom product for use as a novel dietary source of bioavailable supplemental selenium.
DOI: 10.6084/m9.figshare.5501188.v2
title: Old Cluttersims at Icy Scarps Sites

description: If you are looking for data from Dundas et al. 2017, please refer to the fileset with doi number 10.6084/m9.figshare.5537893, found at https://doi.org/10.6084/m9.figshare.5537893.<br>The clutter simulations at the above link were all processed with the most recent version of the clutter simulator out of Dr. Jack Holt's group at UTexas and are aligned with the FPB processed U.S. SHARAD team data, which is publicly available on the PDS.<br>The dataset here contains a mix of clutter simulations that do not all align with the data on the PDS.<br>The HRSC-based clutter simulations here for scarp sites #1 and 5 (HRSC DTMs h2213_0000_dt4.img and h2587_0001_dt4.img, respectively) are the same as that in the other dataset. These were generated by Michael Christoffersen, who kindly ran code out of Dr. Jack Holt's group at UTexas to generate these products. These files are in the HRSC_Cluttersims folder.<br><br>The MOLA-based clutter simulations for scarp sites #1-7 were generated by CO-SHARPS (Colorado SHARAD Radar Processing System). These use the QDA processor and are not aligned with the data available on the PDS. More information about CO-SHARPS can be found at http://www.psi.edu/SHARAD.<br><br>The MOLA-based cluttersims for the two tracks that pass over Milankovic crater that are in this dataset were also generated by Dr. Holt's UTexas group but with an old version of the clutter simulation (from 2013) for analysis in the Bramson et al. 2015 GRL paper "Widespread excess ice in Arcadia Planitia, Mars" (doi:10.1002/2015GL064844).<br>The clutter simulations in this fileset are inconsistent in processing and so if you are here for the icy scarp sites of Dundas et al. 2017, please go to https://doi.org/10.6084/m9.figshare.5537893.
DOI: 10.6084/m9.figshare.5501095
title: Dissociation between seasonal prey availability and prey consumption in a generalist predator

description: Daily temperatures averaged between four data loggers<br>Pitfall counts of what were potential prey items, other Collembola, and Schizocosa spp.<br>Predator molecular gut-content results
DOI: 10.6084/m9.figshare.5501125.v1
title: rich-selenium.xlsx

description: The present study investigated the growth of <i>Pleurotus eryngii </i>var. <i>tuoliensis</i> mycelia in liquid culture, PDA culture and cultivation substrate with different concentrations of sodium selenite, as well as selenium enrichment and selenium speciation in the fruiting body. The results showed that the sensitivity of <i>P. eryngii </i>var. <i>tuoliensis</i> mycelia to selenium was divergent under different culture modes. The biomass of <i>P. eryngii</i> var. <i>tuoliensis</i> was significantly decreased in liquid culture medium with selenium. A relatively low concentrations of selenium (≤ 10 mg/L) promoted mycelia growth under plate culture. In the cultivation substrate, the mycelia grew normally at selenium concentrations of less than 300 mg/kg and reached the highest growth rate of 3.23 mm/d at a concentration of 40 mg/kg. A selenium concentration of 10 mg/kg promoted fruiting of <i>P. eryngii</i> var. <i>tuoliensis</i>; the fruiting bodies were of good quality and had a low malformation rate. However, a selenium concentration greater than 10 mg/kg led to reduced yield, shorter stipes, smaller caps and a higher deformity rate. In addition, the selenium enrichment coefficient of the fruiting bodies was 1.82-3.12, which was far higher than that of those from the control mycelia (0.29). LC-AFS showed that selenium in the fruiting body exists mainly in the form of selenite, SeCys, Met-SeCys and SeMet. These findings suggest that <i>P. eryngii</i> var. <i>tuoliensis</i> could be developed as a selenium-rich mushroom product for use as a novel dietary source of bioavailable supplemental selenium.
DOI: 10.6084/m9.figshare.5501188.v1
title: SHARAD Cluttersims from Dundas et al. 2017 Science

description: This compressed file contains the SHARAD (Shallow Radar) clutter simulations inspected in the Dundas et al. 2017 Science manuscript "Exposed sheets of subsurface ice in the Martian mid-latitudes". The SHARAD instrument was provided to NASA’s Mars Reconnaissance Orbiter mission by the Italian Space Agency (ASI).<br>HRSC is the High Resolution Stereo Camera onboard Mars Express. Scarps #1 and #5 were in areas where HRSC Digital Terrain Models (DTMs) already existed publicly (h2213_0000_dt4.img and h2587_0001_dt4.img, respectively). Using these DTMs, Michael Christoffersen kindly ran code out of Dr. Jack Holt's group at UTexas to generate higher resolution cluttersims for these two scarp sites. These files are in the HRSC_Cluttersims folder.<br><br>MOLA-based cluttersims that were inspected for all 7 sites + Milankovic crater are in the MOLA_Cluttersims folder.The cluttersims for two tracks that pass over Milankovic crater were also generated by Dr. Holt's UTexas group back in 2013 for analysis in the Bramson et al. 2015 GRL paper "Widespread excess ice in Arcadia Planitia, Mars" (doi:10.1002/2015GL064844).The cluttersims for scarp sites #1-7 were generated by CO-SHARPS (Colorado SHARAD Radar Processing System). More information about CO-SHARPS can be found at http://www.psi.edu/SHARAD.<br>
DOI: 10.6084/m9.figshare.5501074
title: Data_SETAC_2017.xlsx

description: Biochemical, genetic and chemical biomarkers.
DOI: 10.6084/m9.figshare.5501074.v1
title: Data_SETAC_2017.xlsx

description: Biochemical, genetic and chemical biomarkers.
DOI: 10.6084/m9.figshare.5501035
title: Statistical Data Analysis using R

description: R Scripts contain statistical data analisys for streamflow and sediment data, including Flow Duration Curves, Double Mass Analysis, Nonlinear Regression Analysis for Suspended Sediment Rating Curves, Stationarity Tests and include several plots.
DOI: 10.6084/m9.figshare.5501041
title: HEC-RAS Steady and Quasi-Unsteady Flow Files

description: File set contains HEC-RAS associated files for Taiacupeba Sediment Model, including main project file (.prj), geometric data (.g0*), steady flow data (.f0*), quasi-unsteady flow data (.q0*), sediment boundary conditions (.s0*) and simulation plans (.p0*). Computational results are not available, one should download files and run them locally.
DOI: 10.6084/m9.figshare.5501047.v1
title: Predicting Hospital Patients Admission to Reduce Emergency Depar.pdf

description: Predicting Hospital Patients Admission to Reduce Emergency Depar
DOI: 10.6084/m9.figshare.5500987
title: Gray OA 2: 2014-2017

description: This study partially updates Gray OA 2012-2016: Open Access Beyond DOAJ, adding full counts for 2016 and doubled counts for January-June 2017, but not updating fee/APC information. Based on actual visits to 18,791 journal and "journal" websites. The report appears as the October 2017 issue of <i>Cites & Insights</i>, a fully OA non-refereed publication: https://citesandinsights.info/civ17i9.pdf<br>
DOI: 10.4225/03/59e33dfb920f1
title: Source Code

description: This is the source code for the paper "Efficient search of the best warping window for Dynamic Time Warping".This work focused on fast learning/searching for the best warping window for Dynamic Time Warping and Time Series Classification.<br>For more info, visit https://github.com/ChangWeiTan/FastWWSearch
DOI: 10.6084/m9.figshare.5500876
title: climate suitablity of annual ryegrass, alfalfa, and sorghum

description: climate suitability index maps of three forage and grain crops including annual ryegrass, alfalfa, and sorghum.
DOI: 10.6084/m9.figshare.5500891.v1
title: ASAIO 2017 DEF.pptx

description: Presentation given at the ASAIO 2017 Meeting on ALMA score coming out from a multiistitutional experience of LVAD and BiVAD.The factors entering in the ALMA score are analysed regarding their potential reversal before implantation.
DOI: 10.6084/m9.figshare.5500873
title: Harland et al. in-situ measurements of wool fibre cortex

description: These data describe <i>in-situ</i> measurements of the cortical cell type distributions or cell lengths from confocal micrographs of merino wool fibres. The associated study, reported in the connected publication, used these data to test theories about the underlying mechanism of hair curvature in mammals. The study adhered fully to New Zealand ethics laws.<br>
DOI: 10.6084/m9.figshare.5500864
title: dataset.rar

description: include three public datasets:MSR action3DMSR dailyActivity3Dhttp://www.uow.edu.au/~wanqing/#MSRAction3DDatasets<br><br>UTD-MHADhttp://www.utdallas.edu/~kehtar/UTD-MHAD.html<br><br>
DOI: 10.6084/m9.figshare.5500864.v1
title: dataset.rar

description: include three public datasets:MSR action3DMSR dailyActivity3Dhttp://www.uow.edu.au/~wanqing/#MSRAction3DDatasets<br><br>UTD-MHADhttp://www.utdallas.edu/~kehtar/UTD-MHAD.html<br><br>
DOI: 10.4225/03/59e302de4ad10
title: Results

description: This is the result folder for our SDM18 paper on "Efficient search of the best warping window for Dynamic Time Warping"
DOI: 10.6084/m9.figshare.5500843
title: "Mapping the Curricular Structure and Contents of Network Science Courses": Dataset and High Resolution Figures

description: Dataset and High-Resolution Figures for:<br><br>Hiroki Sayama, Mapping the curricular structure and contents of network science courses, in Catherine Cramer, Hiroki Sayama, Lori Sheetz, Stephen Uzzo, and Mason Porter, eds., Network Science in Education -- Tools and Techniques for Transforming Teaching and Learning, Springer, 2017, to appear.<br>https://arxiv.org/abs/1707.09570<br><br>The following data and high-resolution figure files are made available here. <br><br>Dataset:<br>* Original dataset of network science topics -- netsci-course-analysis-dataset.zip<br><br>Figures:<br>* Topic word cloud (Fig. 3) -- word-cloud-final.pdf<br>* Original topic network (not included in the paper) -- topic-network-vector.pdf<br>* Filtered topic network (Fig. 4) -- topic-network2.pdf<br>* Topic communities (Fig. 5) -- comm-rev.pdf<br>* Minimum spanning tree (Fig. 6) -- mst-rev.pdf<br><br>
DOI: 10.6084/m9.figshare.5500828
title: La producción musical como objeto de estudio musicológico: un acercamiento metodológico a su análisis.

description: Propuestas de análisis para el estudio de la producción musical desde la musicología.
DOI: 10.6084/m9.figshare.5500831
title: BINEGI.xlsx

description: Descripción de ingreso disponible de los hogares per cápita. Fuente: OCDE Organización para la Cooperación y el Desarrollo Económicos. OCDE, con base en estimaciones del CONEVAL con datos en el MCS-ENIGH 2008, 2010, 2012 y 2014.
DOI: 10.6084/m9.figshare.5500843.v1
title: "Mapping the Curricular Structure and Contents of Network Science Courses": Dataset and High Resolution Figures

description: Dataset and High-Resolution Figures for:<br><br>Hiroki Sayama, Mapping the curricular structure and contents of network science courses, in Catherine Cramer, Hiroki Sayama, Lori Sheetz, Stephen Uzzo, and Mason Porter, eds., Network Science in Education -- Tools and Techniques for Transforming Teaching and Learning, Springer, 2017, to appear.<br>https://arxiv.org/abs/1707.09570<br><br>The following data and high-resolution figure files are made available here. <br><br>Dataset:<br>* Original dataset of network science topics -- netsci-course-analysis-dataset.zip<br><br>Figures:<br>* Topic word cloud (Fig. 3) -- word-cloud-final.pdf<br>* Original topic network (not included in the paper) -- topic-network-vector.pdf<br>* Filtered topic network (Fig. 4) -- topic-network2.pdf<br>* Topic communities (Fig. 5) -- comm-rev.pdf<br>* Minimum spanning tree (Fig. 6) -- mst-rev.pdf<br><br>
DOI: 10.6084/m9.figshare.5500834
title: AC pelleting raw data.xlsx

description: Emergence and mortality of annual ryegrass (<i>Lolium rigidum</i> Gaudin)
DOI: 10.6084/m9.figshare.5500828.v1
title: La producción musical como objeto de estudio musicológico: un acercamiento metodológico a su análisis.

description: Propuestas de análisis para el estudio de la producción musical desde la musicología.
DOI: 10.6084/m9.figshare.5500834.v1
title: AC pelleting raw data.xlsx

description: Emergence and mortality of annual ryegrass (<i>Lolium rigidum</i> Gaudin)
DOI: 10.6084/m9.figshare.5500807
title: Streamflow Records

description: Data sets contain daily discharge records for discontinued gages at Taiacupeba Mirim, Balainho and Taiacupeba Guacu rivers, covering approximately sixteen years of data. Unit system is metric.
DOI: 10.6084/m9.figshare.5500768

description: Modern Electric Field Sensor using modern optic waveguide (Segmented slot waveguide). This study investigates the use of an optimized segmented slot waveguide as the core of an electric field sensor to determine the sensor features that is able to detect a low-frequency AC electric field. The study provides evidence of the feasibility of using a segmented slot waveguide as the primary element for highly sensitive, low-frequency AC electric-field sensors.
DOI: 10.6084/m9.figshare.5500786
title: Cross Sectional Survey

description: Data sets contain station and elevation information, bank stations, and UTM Coordinates for surveyed cross sections within the lower course of Taiacupeba Mirim, Balainho and Taiacupeba Guacu rivers and JUTA Channel. Unit system is metric.
DOI: 10.6084/m9.figshare.5500801
title: Sediment Data

description: Data sets contain bed gradation, suspended sediment concentration and associated discharges, and site description for the stream gages at Taiacupeba Mirim, Balainho and Taiacupeba Guacu rivers's, JUTA Channel and Taiacupeba's Dam Outlet. Unit system is metric.
DOI: 10.6084/m9.figshare.5500807.v1
title: Streamflow Records

description: Data sets contain daily discharge records for discontinued gages at Taiacupeba Mirim, Balainho and Taiacupeba Guacu rivers, covering approximately sixteen years of data. Unit system is metric.
DOI: 10.6084/m9.figshare.5500777
title: Source Code and sample data for RNFL defect analysis

description: This software can be measured retinal nerve fiber layer defect angle (RNFLDA) by using a volume data of optical coherence tomography (OCT). "DATA1.zip" is a sample dataset. For the operation, refer to the operation manual "RNFLDA measurement software operation manual_rev1.pdf".
DOI: 10.6084/m9.figshare.5500747
title: A prediction model for early death in non-small cell lung cancer patients following curative-intent chemoradiotherapy

description: <b>Background:</b> Early death after a treatment can be seen as a therapeutic failure. Accurate prediction of patients at risk for early mortality is crucial to avoid unnecessary harm and reducing costs. The goal of our work is two-fold: first, to evaluate the performance of a previously published model for early death in our cohorts. Second, to develop a prognostic model for early death prediction following radiotherapy. <b>Material and methods:</b> Patients with NSCLC treated with chemoradiotherapy or radiotherapy alone were included in this study. Four different cohorts from different countries were available for this work (<i>N</i> = 1540). The previous model used age, gender, performance status, tumor stage, income deprivation, no previous treatment given (yes/no) and body mass index to make predictions. A random forest model was developed by learning on the Maastro cohort (<i>N</i> = 698). The new model used performance status, age, gender, T and N stage, total tumor volume (cc), total tumor dose (Gy) and chemotherapy timing (none, sequential, concurrent) to make predictions. Death within 4 months of receiving the first radiotherapy fraction was used as the outcome. <b>Results:</b> Early death rates ranged from 6 to 11% within the four cohorts. The previous model performed with AUC values ranging from 0.54 to 0.64 on the validation cohorts. Our newly developed model had improved AUC values ranging from 0.62 to 0.71 on the validation cohorts. <b>Conclusions:</b> Using advanced machine learning methods and informative variables, prognostic models for early mortality can be developed. Development of accurate prognostic tools for early mortality is important to inform patients about treatment options and optimize care.