cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.vq83bk3x5
title: Who develops pandemic fatigue? Insights from latent class analysis

description: According to the World Health Organization, pandemic fatigue poses a
 serious threat for managing COVID-19. Pandemic fatigue is characterized by
 progressive decline in adherence to social distancing (SDIS) guidelines,
 and is thought to be associated with pandemic-related emotional burnout.
 Little is known about the nature of pandemic fatigue; for example, it is
 unclear who is most likely to develop pandemic fatigue. We sought to
 evaluate this issue based on data from 5,812 American and Canadian adults
 recruited during the second year of the COVID-19 pandemic. Past-year
 decline in adherence to SDIS had a categorical latent structure according
 to Latent Class Analysis, consisting of a group adherent to SDIS (Class 1:
 92% of the sample) and a group reporting a progressive decline in
 adherence to SDIS (i.e., pandemic fatigue; Class 2: 8% of the sample).
 Class 2, compared to Class 1, was associated with greater pandemic-related
 burnout, pessimism, and apathy about the COVID-19 pandemic. They also
 tended to be younger, perceived themselves to be more affluent, tended to
 have greater levels of narcissism, entitlement, and gregariousness, and
 were more likely to report having been previously infected with SARSCOV2,
 which they regarded as an exaggerated threat. People in Class 2 also
 self-reported higher levels of pandemic-related stress, anxiety, and
 depression, and described making active efforts at coping with SDIS
 restrictions, which they perceived as unnecessary and stressful. People in
 Class 1 generally reported that they engaged in SDIS for the benefit of
 themselves and their community, although 35% of this class also feared
 they would be publicly shamed if they did not comply with SDIS guidelines.
 The findings suggest that pandemic fatigue affects a substantial minority
 of people and even many SDIS-adherent people experience emotionally
 adverse effects (i.e., fear of being shamed). Implications for the future
 of SDIS are discussed.
DOI: 10.5061/dryad.qjq2bvqkh
title: Stuck between the mandibles of an insect and of a rodent: where does the fate of ash-dominated riparian temperate forests lie?

description: The beaver (Castor canadensis Khul) is a key species that is
 known to shape the composition of riparian forests. Ash trees
 (Fraxinus spp.) can be abundant in these forests. However,
 invasion by the emerald ash borer (Agrilus planipennis Fairmaire)
 in North America threatens their survival. The disappearance of ash will
 have a large impact on the riparian forest composition in itself. It is
 not known what the consequences would be for the remaining forest if ash
 plays an important role in the beaver diet. Inventory plots across a ash
 gradient were measured in Plaisance National Park, Quebec, Canada, to
 collect data and to establish if (1) trees and saplings of this genus were
 selected or avoided by beavers, (2) if other genera had a lower or a
 greater probability of being consumed compared to ash, and (3) if ash
 density could affect the probability of consumption of other genera. Of
 all genera present in the park, ash trees were selected in the highest
 number of plots. Only two
 genera, Carpinus and Populus, had a higher
 probability of being consumed than ash. These genera are not abundant in
 the park, and neither in riparian forests of the temperate biome, and thus
 are not good candidates to replace ash as a staple for beavers. The most
 abundant genus in riparian temperate forests, along with ash,
 is Acer. In this study, Acer trees were not
 selected, and as for Acer saplings, were less likely to be
 consumed than ash. Mixed results were obtained about genera that could
 become more likely to be consumed as ash density decreases. It would seem
 that the disappearance of ash would not cause a switch to a single or a
 few genera in the future, which may be due to the high diversity of genera
 present in temperate riparian forests. However, ash may not disappear
 completely due to its capacity to sprout following the death of the
 aboveground portion of ash trees. This scenario is discussed in light of
 the susceptibility of intermediate-sized ash stems to be colonized by the
 emerald ash borer and of the greater likelihood of beavers to feed on
 these same-sized stems.
description: This data has been collected on 24 plots in Plaisance National
 Park, Quebec, Canada. Plots were 30m along the riverside, and 50m deep
 into the forests (1500m<sup>2</sup>) 1) On
 the plots, all trees (diameter above 9cm) were identified to the species
 and their diameter was measured. The trees were also attributed to a
 distance-to-the-shore class, and were designated as cut or uncut by the
 beavers. 2) On the plots, we selected 10 subplots (5m
 of diameter), and realized the same protocol as the one for the trees, but
 for the shrubs and saplings (diameter under 9cm).
description: All the analyses described in our manuscript have been realized
 with R software 4.1.0
DOI: 10.5061/dryad.w6m905qss
title: The ghosts of ecosystem engineers: Legacy effects of biogenic modifications

description: 1. Ecosystem engineers strongly influence the communities in which they
 live by modifying habitats and altering resource availability. These
 biogenic changes can persist beyond the presence of the engineer, and such
 modifications are known as ecosystem engineering legacy effects. 2.
 Although many authors recognize ecosystem engineering legacies, and some
 case studies quantify the effects of legacies, few general frameworks
 describe their causes and consequences across species or ecosystem types.
 3. Here, we synthesize evidence for ecosystem engineering legacies and
 describe how consideration of key traits of engineers improves
 understanding of which engineers are likely to leave persistent biogenic
 modifications. 4. Our review demonstrates that engineering legacies are
 ubiquitous, with substantial effects on individuals, communities, and
 ecosystem processes. Attributes that may promote the persistence of
 influential legacies relate to an engineer’s traits, including its body
 size, lifespan, and living strategy (individual, conspecific group, or
 collection of multiple co-occurring species). 5. Additional lines of
 inquiry, such as how the recipients respond (e.g., density or richness) or
 the mechanism of engineering (e.g., burrowing or structure building),
 should be included in future ecosystem engineering legacy research. 6.
 Understanding patterns of these persistent effects of ecosystem engineers
 and evaluating the consequences of losing them is an important area of
 research needed for understanding long-term ecological responses to global
 change and biodiversity loss.
DOI: 10.5061/dryad.rr4xgxdcf
title: Speciation rates are unrelated to the formation of population structure in Malagasy Gemsnakes

description: Speciation rates vary substantially over the tree of life. These rates
 should be linked to the rate at which population structure forms if a
 continuum between micro and macroevolutionary processes exists. Previous
 studies examining the link between speciation rates and the degree of
 population formation in clades have shown both correlation and no
 correlation. No study has examined the relationship between speciation
 rates and population structure in a young group endemic to an island. We
 examine this correlation in 109 Gemsnakes (Pseudoxyrhophiidae) endemic to
 Madagascar originating in the early Miocene, thus controlling for
 extinction associated with time and area. We find no relationship between
 rates of speciation and the formation rates of population structure over
 space in 33 species of Gemsnakes. Rates of speciation show low variation,
 and population structure varying widely across species indicates that
 speciation rates and population structure disconnection are largely due to
 persistence of lineages not susceptible to extinction. Extinction can be
 due to many factors all of which can prevent long-term persistence of
 species. We discuss how delimiting populations versus species may
 contribute to problems understanding the continuum between shallow and
 deep evolutionary processes.
description: GBS and AHE genomic data processed for tree anf population
 structure inference. All data and scripts to run analyses in this paper
 are provided (excluding BAMM and CLaDS runs, which are run as
 standalones).
description: Need R.
DOI: 10.5061/dryad.gqnk98ss5
title: Data from: Evidence for the Predator Attraction Hypothesis in an amphibian predator-prey system

description: Many species possess damage-released chemical alarm cues that function in
 alerting nearby individuals to a predator attack. One hypothesis for the
 evolution and/or maintenance of such cues is the Predator Attraction
 Hypothesis, where predators, rather than prey, are the ‘intended’
 recipients of these cues. If a predator attack attracts additional
 predators, these secondary predators might interfere with the predation
 event, providing the prey with a better chance to escape. In this study,
 we conducted two experiments to explore this hypothesis in an amphibian
 predator/prey system. In Experiment 1, we found that tiger salamanders
 (Ambystoma mavortium) showed a foraging attraction to chemical cues from
 wood frog (Lithobates sylvaticus) tadpoles. Salamanders that were
 experienced with tadpole prey, in particular, were strongly attracted to
 tadpole alarm cues. In Experiment 2, we observed experimental encounters
 between a tadpole and either one or two salamanders. The presence of the
 second predator caused salamanders to increase attack speed at the cost of
 decreased attack accuracy (i.e., increasing the probability that the
 tadpole would escape attacks). We also found that the mere presence of
 visual and chemical cues from a second predator did not affect this
 speed/accuracy trade-off but did cause enough of a distraction to increase
 tadpole survival. Thus, our findings are thus consistent with the Predator
 Attraction Hypothesis for the evolution and/or maintenance of alarm cues.
DOI: 10.5061/dryad.mkkwh713w
title: Sea turtle relative abundance in nearshore waters adjacent to the Mississippi River delta, Gulf of Mexico, United States

description: We measured the relative abundance of sea turtles using standardized
 transect surveys conducted during the summer and fall of 2013 in neritic
 waters surrounding the Mississippi River delta in Louisiana, USA. Data
 comprise sea turtle locations, observation circumstances, and
 environmental covariates recorded at the beginning of each transect and at
 the time of each turtle observation. Turtles were recorded by species and
 size class, as well as location in the water column and the distance the
 turtle was from the transect line. Transects were performed on an
 8.2-meter vessel with two observers atop a 4.5-meter elevated platform,
 with vessel speed standardized at ~15 km/hr. These data are the first to
 describe relative abundance of sea turtles observed from small vessels in
 this region. Detection of turtles &lt;45 cm SSCL and data detail are
 greater than aerial surveys. The data serve to inform resource managers
 and researchers regarding these protected marine species.
DOI: 10.15468/dl.ba3f6z
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fiebrigiella gracilis",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 35 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003326-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.spnyvz
title: Occurrence Download

description: A dataset containing 12034 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Viet Nam",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 12034 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003325-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.9cnp5hqnm
title: Aquatic macroinvertebrates from the Nicaraguan Dry Corridor region

description: Aquatic macroinvertebrates are widely used as indicators for water quality
 assessment around the world. Modern strategies for environmental
 assessment implement molecular analysis to delimitate species of aquatic
 macroinvertebrates. Delimitation methods have been established to
 determine boundaries between species units using sequencing data from DNA
 barcodes and serve as the first exploratory tools for taxonomic revisions.
 This is useful in regions such as the neotropics where aquatic
 macroinvertebrate habitats are threatened by human interference and DNA
 databases remain under-studied. We asked whether the biodiversity of
 aquatic macroinvertebrates in a stream in Nicaragua, within the Central
 American Dry Corridor, could be characterized with biological indices and
 DNA barcoding. In this study, we combined regional biological indices
 (BMWP-CR, IBF-SV-2010) along with distance-based (ASAP, BIN) and
 tree-based (GMYC, bPTP) delimitation methods, as well as nucleotide BLAST
 in public barcode databases. We collected samples from the upper, middle,
 and low reaches of the Petaquilla river. The three sites presented
 excellent water quality with the BMWP-CR index, but evidence of high
 organic pollution was found in the middle reach with the IBF-SV-2010
 index. We report a total of 219 COI sequences successfully generated from
 18 families and 8 orders. Operational taxonomic units (OTUs) designation
 ranged from 69–73 using the four methods, with a congruency of 92% for
 barcode assignation. Nucleotide BLAST identified 14 species (27.4% of
 barcodes) and 33 genera (39.3% of barcodes) from query sequences in
 GenBank and BOLD systems databases. This small number of identified OTUs
 may be explained by the paucity of molecular data from the Neotropical
 region. Our study provides valuable information about the characterization
 of macroinvertebrate families that are important biological indicators for
 the assessment of water quality in Nicaragua. The application of molecular
 approaches will allow the study of local diversity and further improve the
 application of molecular techniques for biomonitoring.
description: Collection of samples was done using a multi-habitat approach
 with a 500 µm mesh D-frame dip net. DNA was extracted using the DNeasy
 Blood & Tissue kit (Qiagen, CA, USA). Extraction was done using
 the 658-bp fragment of the COI region with Folmer et al. primers.
 Sequencing was completed using a SeqStudio genetic analyzer (SeqStudio,
 Thermofisher, MA, USA). 
description: Sanger sequencing and fragment analysis software (e.g., MEGA,
 FinchTV, SeqA, etc.).
DOI: 10.5061/dryad.qfttdz0mj
title: Inferring human immunodeficiency virus 1 proviral integration dates with Bayesian Inference

description: Human immunodeficiency virus 1 (HIV) proviruses archived in the persistent
 reservoir currently pose the greatest obstacle to HIV cure due to their
 evasion of combined antiretroviral therapy and ability to reseed HIV
 infection. Understanding the dynamics of the HIV persistent reservoir is
 imperative for discovering a durable HIV cure. Here, we explore Bayesian
 methods using the software BEAST2 to estimate HIV proviral integration
 dates. We started with within-host longitudinal HIV sequences collected
 prior to therapy, along with sequences collected from the persistent
 reservoir during suppressive therapy. We built a BEAST2 model to estimate
 integration dates of proviral sequences collected during suppressive
 therapy, implementing a tip date random walker to adjust the sequence tip
 dates and a latency-specific prior to inform the dates. To validate our
 method, we implemented it on both simulated and empirical data sets.
 Consistent with previous studies, we found that proviral integration dates
 were spread throughout active infection. Path sampling to select an
 alternative prior for date estimation in place of the latency-specific
 prior produced unrealistic results in one empirical data set, while on
 another data set the latency-specific prior was selected as best-fitting.
 Our Bayesian method outperforms current date estimation techniques with a
 root mean squared error of 0.89 years on simulated data relative to
 1.23–1.89 years with previously developed methods. Bayesian methods offer
 an adaptable framework for inferring proviral integration dates.
DOI: 10.5061/dryad.w9ghx3fsn
title: Data from: Repeated alpine flight loss within the widespread New Zealand stonefly Nesoperla fulvescens

description: Flight loss is a common feature of upland insect assemblages, with recent
 studies detecting parallel wing reduction events across independent alpine
 lineages. However, the geographic scale over which such repeated evolution
 can operate remains unclear. In this study, we use
 genotyping-by-sequencing to assess the genomic relationships among
 vestigial-winged and full-winged populations of the widespread New Zealand
 stonefly Nesoperla fulvescens, to test for repeated wing loss events over
 small spatial scales. Biogeographic analyses indicate that alpine wing
 loss in this widespread species is restricted to a single, narrow mountain
 range. Intriguingly, our coalescent analyses indicate that upland
 vestigial-winged N. fulvescens populations are not sister to one another,
 suggesting wings have been lost independently in disjunct populations of
 this species, over a &lt;30 km scale. Our results suggest that
 selection against flight above the alpine treeline can drive rapid and
 repeated adaptation even across narrow spatial scales. We propose that
 such repetitive processes may represent a far more pervasive feature of
 alpine insect adaptation than is currently recognised.
DOI: 10.34810/data2948
title: Dades obtingudes de les proves als estudiants de Màster Interuniversitari en Formació de Professorat d'Educació Secundària Obligatòria i Batxillerat, Formació Professional i Ensenyaments d'Idiomes (Especialitat Matemàtiques) el curs 2025/26

description: El conjunt de dades recull els resultats obtinguts pels alumnes del màster, classificats per alumne i per rúbrica. La seva naturalesa és 0,0.5,1. Les 4 pestanyes reflecteixen els resultats dels 4 problemes.
DOI: 10.5061/dryad.70rxwdc28
title: Data for: Size and abundance of stomach contents from Chatham Island lake smelt

description: Sea level rise threatens ecosystem function in coastal lakes by increasing
 salinity and altering community composition. As mobile generalists, fish
 have considerable influence on the stability of a system by impacting
 trophic network structure. Understanding their diet across abiotic
 gradients, including salinity, can show key characteristics of their
 ecological role, and predator diet shifts may serve as warning signs of
 food web restructuring. Stomach contents analysis was used to look at the
 diet of Retropinna retropinna (common smelt) across
 shallow coastal lakes on Rēkohu (Chatham Island). Smelt stomachs from 10
 lakes (seven freshwater; three salt-influenced) were analysed. Comparisons
 of salt-influenced and freshwater lakes showed shifts in composition, with
 reduced beta diversity with salinity. Smelt in
 freshwater lakes predominantly consumed herbivorous, omnivorous, or
 predatory insect larvae while diet in salt-influenced lakes was dominanted
 by crustacean shredders. The between lake taxonomic variation amongst
 salt-influenced lakes was lower than between freshwater lakes, suggesting
 homogenisation of smelt diet with salinity. Differences in
 composition and heterogeneity did not translate to consistent differences
 in total niche width or individual specialisation between freshwater and
 salt-influenced lakes.  Further development of knowledge
 on biological structure across salinity gradients is essential to
 understand ecosystem function under future climate scenarios.
DOI: 10.15468/dl.wej4bp
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "GadmGid is BRA.13_1",
 "TaxonKey is Melanoxylum brauna"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003327-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.3r2280gkr
title: Survey: Motivation, capability and opportunity for food safety messages

description: Background A significant part of foodborne infections is caused by food
 eaten at home, and food safety messages are given to help consumers
 mitigate risk. The World Health Organisation (WHO) “Five Keys to Safer
 Food”, developed about 20 years ago has been used with success worldwide
 to provide general advice on how to prepare food safely. Scope and
 Approach In this commentary, we discuss how food safety messages could be
 updated using a holistic approach built on implementation science,
 considering new food consumption patterns and insights from natural and
 social sciences. A stepwise approach for developing and evaluating food
 safety messages, performed in the European project SafeConsume, is
 presented. The top pathogen-food combinations associated with foodborne
 disease in Europe combined with common consumer practices were used to
 identify behaviours potentially leading to illness. Food safety messages
 were suggested and evaluated for understanding as well as capability,
 opportunity and motivation in an expert survey. Key Findings and
 Conclusions Overall, the food safety topics prioritised overlapped with
 those from WHO. The opportunity and motivation for changing behaviour,
 (e.g. choose pasteurised egg) were identified as important restrictions
 for uptake of messages. Also, the large variation in basic terminology,
 such as “thoroughly cooked” is a challenge. Therefore, to enhance the
 capability, there is a need to be very specific, without excluding other
 safe alternatives or making lengthy explanations. The food safety messages
 suggested by the expert group were evaluated as more likely to the
 implemented among domestic cooks and resulting in safer practices than
 corresponding WHO messages.
description: In the H2020 RIA Safeconsume, a web-based expert survey was
 performed to measure potential impact of a set of Food Safety Messages on
 consumers' food practices. For each message, the experts gave a score
 on potential capability, motivation and opportunity for consumers to
 change behaviour. The dataset is the raw data collected, that is the
 scores given for each participant and each Food Safety Message. Also, data
 on the field of expertise and country of residence were
 collected. 
description: Microsoft Excel.