cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24988230
title: Antimicrobial resistance surveillance report, Yasothon Hospital, Yasothon, Thailand, 01 Jan 2023 to 31 Dec 2023

description: The AMASS Version 3.0 (BETA) Build 3026 that was released on 8 January 2024 provide updates including:Add “Annex C: Cluster signals”. This supplementary report shows the information of potential clusters which are identified using the SatScan (www.satscan.org);Add processed data files in the folder “Report_with_patient_identifiers” so that users can use the processed data files (e.g. deduplicated and merged data files for each AMR pathogen) for any further analysis and internal use;<i>Enterococcus faecalis</i> and <i>E. faecium</i> are explicitly included in the pathogens under the survey (while <i>Enterococcus</i><i> </i>spp. are used in the AMASS version 2.0);Add a few antibiotics in the list of antibiotics for a few pathogens under the survey;Use only Python rather than R + Python (as used in the AMASS version 2.0)The application can be downloaded from https://www.amass.websiteThis is a repository of the files for Yasothon Hospital.The attached four files are:1) The AMR surveillance report automatically generated from AMASS Version 3.0 (BETA) Build 3026 using hospital admission and microbiology data of Yasothon Hospital in Thailand2) Data dictionary for microbiology data file of Yasothon Hospital (configured by the hospital to be used with the exported dataset from WHONET version 2022 and the AMASS Version 3.0 (BETA) Build 3026 application)3) Data dictionary for hospital admission data of Yasothon Hospital (configured by the hospital to be used with the exported dataset from HOSxP and AMASS Version 3.0 (BETA) Build 3026 application)4) Data dictionary for wards from microbiology data file of Yasothon Hospital (configured by the hospital to be used with the AMASS Version 3.0 (BETA) Build 3026 application)Please note that the three data dictionary files can be re-used with the data files of the hospital in the future in cases when variables names and values in the raw data remained unchanged.
DOI: 10.6084/m9.figshare.24988230.v1
title: Antimicrobial resistance surveillance report, Yasothon Hospital, Yasothon, Thailand, 01 Jan 2023 to 31 Dec 2023

description: The AMASS Version 3.0 (BETA) Build 3026 that was released on 8 January 2024 provide updates including:Add “Annex C: Cluster signals”. This supplementary report shows the information of potential clusters which are identified using the SatScan (www.satscan.org);Add processed data files in the folder “Report_with_patient_identifiers” so that users can use the processed data files (e.g. deduplicated and merged data files for each AMR pathogen) for any further analysis and internal use;<i>Enterococcus faecalis</i> and <i>E. faecium</i> are explicitly included in the pathogens under the survey (while <i>Enterococcus</i><i> </i>spp. are used in the AMASS version 2.0);Add a few antibiotics in the list of antibiotics for a few pathogens under the survey;Use only Python rather than R + Python (as used in the AMASS version 2.0)The application can be downloaded from https://www.amass.websiteThis is a repository of the files for Yasothon Hospital.The attached four files are:1) The AMR surveillance report automatically generated from AMASS Version 3.0 (BETA) Build 3026 using hospital admission and microbiology data of Yasothon Hospital in Thailand2) Data dictionary for microbiology data file of Yasothon Hospital (configured by the hospital to be used with the exported dataset from WHONET version 2022 and the AMASS Version 3.0 (BETA) Build 3026 application)3) Data dictionary for hospital admission data of Yasothon Hospital (configured by the hospital to be used with the exported dataset from HOSxP and AMASS Version 3.0 (BETA) Build 3026 application)4) Data dictionary for wards from microbiology data file of Yasothon Hospital (configured by the hospital to be used with the AMASS Version 3.0 (BETA) Build 3026 application)Please note that the three data dictionary files can be re-used with the data files of the hospital in the future in cases when variables names and values in the raw data remained unchanged.
DOI: 10.5517/ccdc.csd.cc2hjzxy
title: CCDC 2310241: Experimental Crystal Structure Determination

description: Related Article: Shannon Pecnard, Xinya Liu, Olivier Provot, Pascal Retailleau, Christine Tran, Abdallah Hamze||Org.Chem.Front.|||doi:10.1039/D3QO01973J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hjzyz
title: CCDC 2310242: Experimental Crystal Structure Determination

description: Related Article: Shannon Pecnard, Xinya Liu, Olivier Provot, Pascal Retailleau, Christine Tran, Abdallah Hamze||Org.Chem.Front.|||doi:10.1039/D3QO01973J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hjzz0
title: CCDC 2310243: Experimental Crystal Structure Determination

description: Related Article: Shannon Pecnard, Xinya Liu, Olivier Provot, Pascal Retailleau, Christine Tran, Abdallah Hamze||Org.Chem.Front.|||doi:10.1039/D3QO01973J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hk5hr
title: CCDC 2310414: Experimental Crystal Structure Determination

description: Related Article: Can Luo, Chun-Yan Guan, Zhen-Yu Li, Beiling Gao, Guang-Jian Mei|2024|Org.Chem.Front.|||doi:10.1039/D3QO02033A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hm2y5
title: CCDC 2312257: Experimental Crystal Structure Determination

description: Related Article: Jonathan De Tovar, Christian Philouze, Aurore Thibon-Pourret, Catherine Belle|2024|Chem.Commun.|60|2228|doi:10.1039/D3CC06264C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hm2z6
title: CCDC 2312258: Experimental Crystal Structure Determination

description: Related Article: Jonathan De Tovar, Christian Philouze, Aurore Thibon-Pourret, Catherine Belle|2024|Chem.Commun.|60|2228|doi:10.1039/D3CC06264C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hm308
title: CCDC 2312259: Experimental Crystal Structure Determination

description: Related Article: Jonathan De Tovar, Christian Philouze, Aurore Thibon-Pourret, Catherine Belle|2024|Chem.Commun.|60|2228|doi:10.1039/D3CC06264C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hpfsf
title: CCDC 2314515: Experimental Crystal Structure Determination

description: Related Article: Koji Yamamoto, Kanta Tsutsui, Miho Tanuma, Kaname Ito, Kan Wakamatsu, Koji Yamamoto, Yosuke Nakamura|2024|Chem.Commun.|60|2220|doi:10.1039/D3CC06206F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h1gjk
title: CCDC 2295318: Experimental Crystal Structure Determination

description: Related Article: Xiaokang Wang, Hongyan Liu, Meng Sun, Haoyang Wang, Xueying Feng, Wenmiao Chen, Xiang Feng, Weidong Fan, Daofeng Sun|2024|ACS Applied Materials and Interfaces|16|7819|doi:10.1021/acsami.3c17622
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hzjrs
title: CCDC 2323256: Experimental Crystal Structure Determination

description: Related Article: Zhou Zhang, Jin Li, Zhiwei Cai, Songyao Kang, Jian Wang, Yue Cui, Siyuan Han, Lei Sheng, Qing Yin, Ang Dai, Weining Zhao, Fangyuan Zhao||Chem.Commun.|||doi:10.1039/D3CC05770D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gvkc8
title: CCDC 2289640: Experimental Crystal Structure Determination

description: Related Article: Nicholas Lutz, Josephine Bicknell, Jesus Daniel Loya, Eric W. Reinheimer, Gonzalo Campillo-Alvarado|2024|CrystEngComm|26|1067|doi:10.1039/D4CE00037D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gvkgc
title: CCDC 2289643: Experimental Crystal Structure Determination

description: Related Article: Nicholas Lutz, Josephine Bicknell, Jesus Daniel Loya, Eric W. Reinheimer, Gonzalo Campillo-Alvarado|2024|CrystEngComm|26|1067|doi:10.1039/D4CE00037D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gvkhd
title: CCDC 2289644: Experimental Crystal Structure Determination

description: Related Article: Nicholas Lutz, Josephine Bicknell, Jesus Daniel Loya, Eric W. Reinheimer, Gonzalo Campillo-Alvarado|2024|CrystEngComm|26|1067|doi:10.1039/D4CE00037D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gvkd9
title: CCDC 2289641: Experimental Crystal Structure Determination

description: Related Article: Nicholas Lutz, Josephine Bicknell, Jesus Daniel Loya, Eric W. Reinheimer, Gonzalo Campillo-Alvarado|2024|CrystEngComm|26|1067|doi:10.1039/D4CE00037D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gvkfb
title: CCDC 2289642: Experimental Crystal Structure Determination

description: Related Article: Nicholas Lutz, Josephine Bicknell, Jesus Daniel Loya, Eric W. Reinheimer, Gonzalo Campillo-Alvarado|2024|CrystEngComm|26|1067|doi:10.1039/D4CE00037D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hm2w3
title: CCDC 2312255: Experimental Crystal Structure Determination

description: Related Article: Jonathan De Tovar, Christian Philouze, Aurore Thibon-Pourret, Catherine Belle|2024|Chem.Commun.|60|2228|doi:10.1039/D3CC06264C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hm2x4
title: CCDC 2312256: Experimental Crystal Structure Determination

description: Related Article: Jonathan De Tovar, Christian Philouze, Aurore Thibon-Pourret, Catherine Belle|2024|Chem.Commun.|60|2228|doi:10.1039/D3CC06264C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g0f31
title: CCDC 2264522: Experimental Crystal Structure Determination

description: Related Article: Qingxia Yao, Xuze Pan, Xuezhen Si, Xin Wang, Xiaoying Zhang, Jinle Hou, Jie Su, Yi Qiu, Jun Li|2024|Chem.Commun.|60|2188|doi:10.1039/D3CC06114K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hf8cl
title: CCDC 2306659: Experimental Crystal Structure Determination

description: Related Article: Wen-Wen Qin, Bing-Fan Long, Zhong-Hong Zhu, Hai-Ling Wang, Fu-Pei Liang, Hua-Hong Zou|2024|Dalton Trans.|53|3675|doi:10.1039/D3DT04028C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hf8dm
title: CCDC 2306660: Experimental Crystal Structure Determination

description: Related Article: Wen-Wen Qin, Bing-Fan Long, Zhong-Hong Zhu, Hai-Ling Wang, Fu-Pei Liang, Hua-Hong Zou|2024|Dalton Trans.|53|3675|doi:10.1039/D3DT04028C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hfddr
title: CCDC 2306784: Experimental Crystal Structure Determination

description: Related Article: Wen-Wen Qin, Bing-Fan Long, Zhong-Hong Zhu, Hai-Ling Wang, Fu-Pei Liang, Hua-Hong Zou|2024|Dalton Trans.|53|3675|doi:10.1039/D3DT04028C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hf8jr
title: CCDC 2306664: Experimental Crystal Structure Determination

description: Related Article: Wen-Wen Qin, Bing-Fan Long, Zhong-Hong Zhu, Hai-Ling Wang, Fu-Pei Liang, Hua-Hong Zou|2024|Dalton Trans.|53|3675|doi:10.1039/D3DT04028C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/vdjrhx6j8s.1
title: Sustained antidepressant effects of ketamine metabolite involve GABAergic inhibition-mediated molecular dynamics in aPVT glutamatergic neurons

description: Mendeley Table S1. List of primer sequences used for qPCR, related to STAR Methods.

Mendeley Table S2. Differentially expressed genes (a) upregulated and (b) downregulated in smSDS-exposed BALB mice receiving saline compared with non-stressed BALB mice receiving saline, related to Figure 4

Mendeley Table S3. Differentially expressed genes (a) upregulated and (b) downregulated in smSDS-exposed BALB mice receiving (2S,6S)-HNK compared with smSDS-exposed BALB mice receiving saline, related to Figure 4

Mendeley Table S4. Differentially expressed genes reciprocally regulated by smSDS and (2S,6S)-HNK, related to Figure 4

Mendeley Figure S14. Illustration of the AAV-driven transgene expression and taCasp3 efficacy, related to Figures 2, 3, 5, 6, 7, and 8.
AAV-driven transgene expression (in the cell soma or nucleus) and taCasp3 efficacy (Cre deficient) in the PVT overlayed on brain sections adapted from Franklin and Paxinos (2008).
DOI: 10.17632/vkcnhm7rwc.1
title: Li-Purser-Liwocha-Scott et al raw image data

description: Raw image data including autoradiograms and Western blots.
DOI: 10.5281/zenodo.10685531
title: cultural-ai/ContentiousTermsLOD: v1.0.0

description: Investigating how culturally sensitive terms are used in Linked Open Data. The archived repository of the research paper.
DOI: 10.5281/zenodo.10685532
title: cultural-ai/ContentiousTermsLOD: v1.0.0

description: Investigating how culturally sensitive terms are used in Linked Open Data. The archived repository of the research paper.
DOI: 10.26030/mx0n-ta73
title: Spaceflight increases sarcoplasmic reticulum Ca2+ leak and this cannot be counteracted with BuOE treatment (Soleus muscle from RR-18, Western Blot and ATPase Assays)

description: Spending time in a microgravity environment is known to cause significant skeletal muscle atrophy and weakness via muscle unloading, which can be partly attributed to Ca2+ dysregulation. The sarco(endo)plasmic reticulum Ca2+ ATPase (SERCA) pump is responsible for bringing Ca2+ from the cytosol into its storage site, the sarcoplasmic reticulum (SR), at the expense of ATP. We have recently demonstrated that, in the soleus of spaceflown mice, the Ca2+ uptake ability of the SERCA pump is severely impaired and this may be attributed to increases in reactive oxygen/nitrogen species (RONS), to which SERCA is highly susceptible. The purpose of this study was therefore to investigate whether treatment with the antioxidant, MnTnBuOE-2-PyP (BuOE), could attenuate muscle atrophy and SERCA dysfunction. We received soleus muscles from the rodent research 18 mission which had male mice housed on the international space station for 35 days and treated with either saline or BuOE. Spaceflight significantly reduced the soleus:body mass ratio and significantly increased SERCA’s ionophore ratio, a measure of SR Ca2+ leak, and 4-HNE content (marker of RONS), none of which could be rescued by BuOE treatment. In conclusion, we find that spaceflight induces significant soleus muscle atrophy and SR Ca2+ leak that cannot be counteracted with antioxidant treatment. Future work should investigate alternative therapeutics that are specifically aimed at increasing SERCA activation or reducing Ca2+ leak. This study derives results from the Western Blot and ATPase Assays using soleus tissue from the RR-18 mission.
DOI: 10.34740/kaggle/dsv/7666962
title: BBC News
DOI: 10.5281/zenodo.10685466
title: Image data for Rosser et al. 2024 Hybrid speciation driven by multilocus introgression of ecological traits.

description: Butterfly colour pattern phenotypes (RGB images) analysed in Rosser et al. 2024 Hybrid speciation driven by multilocus introgression of ecological traits. See Supplementary Information for details.
DOI: 10.5281/zenodo.10685467
title: Image data for Rosser et al. 2024 Hybrid speciation driven by multilocus introgression of ecological traits.

description: Butterfly colour pattern phenotypes (RGB images) analysed in Rosser et al. 2024 Hybrid speciation driven by multilocus introgression of ecological traits. See Supplementary Information for details.
DOI: 10.5281/zenodo.10685537
title: Supporting materials for "Direction-aware functional class scoring enrichment analysis of Infinium DNA methylation data"

description: Here are the supporting information for the manuscript entitled "Direction-aware functional class scoring enrichment analysis of Infinium DNA methylation data". The article describes a method for accurate pathway enrichment analysis of Infinium Methylation array data.

This archive contains the software repository for the project at time of public release, a docker image to facilitate reproduction, a copy of the preprint and an R Markdown generated HTML report that demonstrates a simple application of the method as mentioned in the preprint. 

The PDF file "Direction-aware FCS V2.3 preprint.pdf" is the preprint. The "gmea.tar.gz" file is the docker image. The "gmea-main.zip" file is the git software repository. The "example_workflow.html" file is the HTML report.