cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/p4hbjm5zcs
title: Fructose-1,6-bisphosphatase 1 mediates Ikkβ dephosphorylation and promotes the polarization of immunosuppressive tumor-associated macrophages during metabolic adaptation in gallbladder carcinoma

description: Human GBC tissues were obtained from patients undergoing surgery at the Department of General Surgery, Shengjing Hospital of China Medical University. The tumor samples were processed for single-cell RNA sequencing and GBC organoid construction. To prepare the tissues for single-cell RNA sequencing, tissues were dissociated into single cells in dissociation solution in a 37°C water bath with shaking for 20 min at 100 rpm. The cell pellet was subsequently resuspended in 50 μl of 1× PBS. Single-cell suspensions were loaded into a 10x Chromium system according to the manufacturer’s instructions of the 10X Genomics Chromium Single-Cell 3’ kit (V3). The following cDNA amplification and library construction steps were performed according to the standard protocol.
DOI: 10.17632/p4hbjm5zcs.1
title: Fructose-1,6-bisphosphatase 1 mediates Ikkβ dephosphorylation and promotes the polarization of immunosuppressive tumor-associated macrophages during metabolic adaptation in gallbladder carcinoma

description: Human GBC tissues were obtained from patients undergoing surgery at the Department of General Surgery, Shengjing Hospital of China Medical University. The tumor samples were processed for single-cell RNA sequencing and GBC organoid construction. To prepare the tissues for single-cell RNA sequencing, tissues were dissociated into single cells in dissociation solution in a 37°C water bath with shaking for 20 min at 100 rpm. The cell pellet was subsequently resuspended in 50 μl of 1× PBS. Single-cell suspensions were loaded into a 10x Chromium system according to the manufacturer’s instructions of the 10X Genomics Chromium Single-Cell 3’ kit (V3). The following cDNA amplification and library construction steps were performed according to the standard protocol.
DOI: 10.17632/78gxvmmm88
title: Adaptive ranking algorithm for material selection in Mechanical Engineering Design

description: The selection of engineering materials remains a critical challenge in mechanical design, where multiple, often conflicting, criteria must be evaluated under uncertainty. This study presents a novel decision-support model that integrates adaptive fuzzy variable creation, balanced weighting strategies, and defuzzification techniques to improve fidelity of material ranking and usability. Unlike conventional multi-criteria decision-making (MCDM) methods that either rely solely on crisp datasets or impose high computational costs through complex fuzzy logic, the proposed model offers a flexible and computationally efficient hybrid framework. It combines subjective expert judgments with objective entropy-based weights, enabling directional control of attributes such as maximising strength and minimising cost. The model was benchmarked against an established published method, and results demonstrate high comparability in ranking outcomes, validating its robustness and credibility. Beyond achieving performance parity, the proposed framework offers clearer interpretability, reduced computational complexity, and adaptability across various design contexts. These findings highlight its potential as a scalable and reliable tool for systematic material selection, bridging theoretical advances in MCDM with practical engineering applications.
DOI: 10.17632/78gxvmmm88.1
title: Adaptive ranking algorithm for material selection in Mechanical Engineering Design

description: The selection of engineering materials remains a critical challenge in mechanical design, where multiple, often conflicting, criteria must be evaluated under uncertainty. This study presents a novel decision-support model that integrates adaptive fuzzy variable creation, balanced weighting strategies, and defuzzification techniques to improve fidelity of material ranking and usability. Unlike conventional multi-criteria decision-making (MCDM) methods that either rely solely on crisp datasets or impose high computational costs through complex fuzzy logic, the proposed model offers a flexible and computationally efficient hybrid framework. It combines subjective expert judgments with objective entropy-based weights, enabling directional control of attributes such as maximising strength and minimising cost. The model was benchmarked against an established published method, and results demonstrate high comparability in ranking outcomes, validating its robustness and credibility. Beyond achieving performance parity, the proposed framework offers clearer interpretability, reduced computational complexity, and adaptability across various design contexts. These findings highlight its potential as a scalable and reliable tool for systematic material selection, bridging theoretical advances in MCDM with practical engineering applications.
DOI: 10.5517/ccdc.csd.cc2jljd2
title: CCDC 2341504: Experimental Crystal Structure Determination

description: Related Article: Hengyi Xu,  Xianyan Zhang,  Yawen Zhang,  Guowei Liu,  Yinghan Chen,  Xuewen Hou,  Xiaolin Liu,  Kaijin Zhang,  Chuanteng Ma,  Ruqian Feng,  Juan Shen,  Blaine A. Pfeifer,  Qian Che,  Tianjiao Zhu,  Guojian Zhang|2025|Nat.Commun.|16|7369|doi:10.1038/s41467-025-62075-4
description: Related Article: Hengyi Xu|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jljg4
title: CCDC 2341506: Experimental Crystal Structure Determination

description: Related Article: Hengyi Xu,  Xianyan Zhang,  Yawen Zhang,  Guowei Liu,  Yinghan Chen,  Xuewen Hou,  Xiaolin Liu,  Kaijin Zhang,  Chuanteng Ma,  Ruqian Feng,  Juan Shen,  Blaine A. Pfeifer,  Qian Che,  Tianjiao Zhu,  Guojian Zhang|2025|Nat.Commun.|16|7369|doi:10.1038/s41467-025-62075-4
description: Related Article: Hengyi Xu|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k3ls2
title: CCDC 2356954: Experimental Crystal Structure Determination

description: Related Article: Shuai Zhang,  Wenbin Huang,  Yuxin Zhu,  Jian Wang,  Feng Cao,  Qian Zhang,  Engui Zhao,  Zikai He|2025|Nat.Commun.|16|7320|doi:10.1038/s41467-025-62581-5
description: Related Article: shuai zhang|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k3lt3
title: CCDC 2356955: Experimental Crystal Structure Determination

description: Related Article: Shuai Zhang,  Wenbin Huang,  Yuxin Zhu,  Jian Wang,  Feng Cao,  Qian Zhang,  Engui Zhao,  Zikai He|2025|Nat.Commun.|16|7320|doi:10.1038/s41467-025-62581-5
description: Related Article: shuai zhang|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kz4qf
title: CCDC 2382465: Experimental Crystal Structure Determination

description: Related Article: Hengyi Xu,  Xianyan Zhang,  Yawen Zhang,  Guowei Liu,  Yinghan Chen,  Xuewen Hou,  Xiaolin Liu,  Kaijin Zhang,  Chuanteng Ma,  Ruqian Feng,  Juan Shen,  Blaine A. Pfeifer,  Qian Che,  Tianjiao Zhu,  Guojian Zhang|2025|Nat.Commun.|16|7369|doi:10.1038/s41467-025-62075-4
description: Related Article: Hengyi Xu|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lybjf
title: CCDC 2411475: Experimental Crystal Structure Determination

description: Related Article: Russell M. Main, Romy Ettlinger, Tia K. Tajnšek, Deborah A. Brako-Amoafo, Maximillian G. Stanzione, Morven J. Duncan, Philip Ettlinger, Gaynor B. Lawrence, Mark R. Warren, Christopher J. Heard, Russell E. Morris|2025|J.Am.Chem.Soc.|147|31260|doi:10.1021/jacs.5c10395
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.9dfdt3
title: Occurrence Download

description: A dataset containing 810 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Forchhammeria watsonii"
 ]
}

 The dataset includes 810 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012724-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n49ubk
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Forchhammeria sessilifolia"
 ]
}

 The dataset includes 49 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012725-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30225316.v2
title: Functional Gene table

description: Functional Gene table of <i>Bacillus altitudinis</i> AK25 related to metal stress, motility, chemotaxis and biofilm.
DOI: 10.5281/zenodo.17512011
title: Integrating mitochondrial, genomic and species distribution model approaches in the reconstruction of the Sardinian Warbler (Curruca melanocephala) phylogeography

description: Fasta sequences submitted to Genbank and associated to the original paper "Integrating mitochondrial, genomic and species distribution model approaches in the reconstruction of the Sardinian Warbler (Curruca melanocephala) phylogeography"
DOI: 10.5281/zenodo.17512012
title: Integrating mitochondrial, genomic and species distribution model approaches in the reconstruction of the Sardinian Warbler (Curruca melanocephala) phylogeography

description: Fasta sequences submitted to Genbank and associated to the original paper "Integrating mitochondrial, genomic and species distribution model approaches in the reconstruction of the Sardinian Warbler (Curruca melanocephala) phylogeography"
DOI: 10.15468/dl.7jj4gq
title: Occurrence Download

description: A dataset containing 152 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Forchhammeria macrocarpa"
 ]
}

 The dataset includes 152 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012727-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u329tw
title: Occurrence Download

description: A dataset containing 198101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scomber scombrus",
 "Year 1965-2024"
 ]
}

 The dataset includes 198101 records from 220 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012701-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/44jsyrj24r
title: Original Data

description: Data of the manuscript to CATENA，We collected soil samples for the analysis of their laboratory physical and chemical properties.
DOI: 10.17632/44jsyrj24r.1
title: Original Data

description: Data of the manuscript to CATENA，We collected soil samples for the analysis of their laboratory physical and chemical properties.
DOI: 10.15468/dl.arfmqj
title: Occurrence Download

description: A dataset containing 3395 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((0.53882 43.02102,0.33976 40.21888,3.34096 41.26777,3.73908 42.77602,0.53882 43.02102))",
 "TaxonKey is Aquila fasciata"
 ]
}

 The dataset includes 3395 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012728-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5d50g994
title: MassIVE MSV000099725 - GNPS Chemical profiling of Beauveria bassiana
title: Differential metabolite profiles induced by different substrates on the fungal metabolome
DOI: 10.15468/dl.vfgn8x
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mus musculus",
 "HasCoordinate is true",
 "Country is Czechia"
 ]
}

 The dataset includes 86 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012729-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.utr8qz
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mus musculus",
 "HasCoordinate is true",
 "Country is Slovakia"
 ]
}

 The dataset includes 87 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012730-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.95emba
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mus musculus",
 "HasCoordinate is true",
 "Country is Hungary"
 ]
}

 The dataset includes 30 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012731-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ss/qhqkhz
title: NGT Signs Iconicity Ratings

description: This dataset contains iconicity ratings and response times for 415 signs in NGT (Sign Language of the Netherlands/Dutch Sign Language). &lt;br&gt;
There are five documents in this repository:&lt;br&gt;
(1) Iconicity ratings&lt;br&gt;
(2) Response times&lt;br&gt;
(3) Summary description of participants&lt;br&gt;
(4) Questionnaire&lt;br&gt;
(5) Instruction videos in NGT&lt;br&gt;
&lt;p&gt;
The documents (1) and (2) contain data from the same 23 deaf signers. Response times are for the iconicity ratings. The videos referred to in the CSV files are in a separate repository, "NGT video stimuli, with and without mouth actions" here: https://doi.org/10.17026/SS/CNQGSY
DOI: 10.6084/m9.figshare.25360240
title: Geographic and taxonomic patterns influence the scientific and societal interest in urban soil microbial diversity

description: This folder contains relevant datasets and code generated in the study:Masson S., Chialva<sup> </sup>M., Bongiovanni D., Adamo M., Stefanini I., Lanfranco L. A systematic scoping review reveals that geographic and taxonomic patterns influence the scientific and societal interest in urban soil microbial diversity. (2025). <i>Environmental Microbiome</i>, 20:17. Available at: https://doi.org/10.1186/s40793-025-00677-7.The main database (tab-delimited file), additional files and R scripts used to parse and analyze the data are provided.The main dataset provided (UrbanSoil_DB_with_metrics.tsv) was generated based on a raw database retrieved from Web of Science (see the paper for further details) by adding citations and the Altmetric Attention Score using the uRban_v5_add_metrics.R script.Modeling and statistics were performed using the uRban_v5_models_and_statistics.R script and the datasets provided here as input.Auth_lon_lat.txt &gt; geographical coordinates for each of the investigated site across the reviewed studies (WGS84).StudySite_lon_lat.txt &gt; geographical coordinates for each of the corresponding author institution across the reviewed studies (WGS84).<br><br>
DOI: 10.6084/m9.figshare.25360240.v2
title: Geographic and taxonomic patterns influence the scientific and societal interest in urban soil microbial diversity

description: This folder contains relevant datasets and code generated in the study:Masson S., Chialva<sup> </sup>M., Bongiovanni D., Adamo M., Stefanini I., Lanfranco L. A systematic scoping review reveals that geographic and taxonomic patterns influence the scientific and societal interest in urban soil microbial diversity. (2025). <i>Environmental Microbiome</i>, 20:17. Available at: https://doi.org/10.1186/s40793-025-00677-7.The main database (tab-delimited file), additional files and R scripts used to parse and analyze the data are provided.The main dataset provided (UrbanSoil_DB_with_metrics.tsv) was generated based on a raw database retrieved from Web of Science (see the paper for further details) by adding citations and the Altmetric Attention Score using the uRban_v5_add_metrics.R script.Modeling and statistics were performed using the uRban_v5_models_and_statistics.R script and the datasets provided here as input.Auth_lon_lat.txt &gt; geographical coordinates for each of the investigated site across the reviewed studies (WGS84).StudySite_lon_lat.txt &gt; geographical coordinates for each of the corresponding author institution across the reviewed studies (WGS84).<br><br>
DOI: 10.6084/m9.figshare.25360240.v1
title: Geographic and taxonomic patterns influence the scientific and societal interest in urban soil microbial diversity

description: This folder contains relevant datasets and code generated in the study:Masson S., Chialva<sup> </sup>M., Bongiovanni D., Adamo M., Stefanini I., Lanfranco L. Geographic and taxonomic patterns influence the scientific and societal interest in urban soil microbial diversity. 2024 <i>under revision</i>.The main database (tab-delimited file), additional files and R scripts used to parse and analyze the data are provided.The main dataset provided (UrbanSoil_DB_with_metrics.tsv) was generated based on a raw database retrieved from Web of Science (see the paper for further details) by adding citations and the Altmetric Attention Score using the uRban_v5_add_metrics.R script.Modeling and statistics were performed using the uRban_v5_models_and_statistics.R script and the datasets provided here as input.Auth_lon_lat.txt &gt; geographical coordinates for each of the investigated site across the reviewed studies (WGS84).StudySite_lon_lat.txt &gt; geographical coordinates for each of the corresponding author institution across the reviewed studies (WGS84).<br><br>
DOI: 10.17031/68f7904580c83
title: 2023 South Skye Seas Initiative Under water marine life observation in Gott Bay, Tiree

description: Survey to identify a suspected seagrass bed. Seagrass bed was identified using GoPro on a pole lowered on a rope from a stationary boat.
description: Data archived into DASSH from Marine Recorder Online
DOI: 10.5281/zenodo.17512327
title: TILDE: Trustworthy Access to Knowledge from the Indexed Web

description: Dataset of curated health-related websites used for the TILDE RAG system, containing json exports for SOLR collections (i) covid and (ii) covidChunks for semantic retrieval.
DOI: 10.5281/zenodo.17512328
title: TILDE: Trustworthy Access to Knowledge from the Indexed Web

description: Dataset of curated health-related websites used for the TILDE RAG system, containing json exports for SOLR collections (i) covid and (ii) covidChunks for semantic retrieval.
DOI: 10.15468/dl.tyvx6q
title: Occurrence Download

description: A dataset containing 3427 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.6.4_1",
 "TaxonKey is Pycnonotus sinensis"
 ]
}

 The dataset includes 3427 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012732-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17512772
title: Pressure drop of design models by flow rate

description: Pressure-drop results for a Nissan Leaf traction motor with a serpentine water jacket, comparing the no-vane configuration and the optimized guide-vane design across coolant flow rates (LPM). Units: flow rate in LPM; pressure drop in Pa.
DOI: 10.5281/zenodo.17512773
title: Pressure drop of design models by flow rate

description: Pressure-drop results for a Nissan Leaf traction motor with a serpentine water jacket, comparing the no-vane configuration and the optimized guide-vane design across coolant flow rates (LPM). Units: flow rate in LPM; pressure drop in Pa.
DOI: 10.6084/m9.figshare.29820410
title: <b>Metagenome Assembled Genomes of bacterial communities in the eastern Southwest Indian Ridge, Indian Ocean</b>

description: This data presents high-quality metagenome-assembled genomes (MAGs) from hydrothermal plumes of the eastern Southwest Indian Ridge. MAGs associated with methane, metal, and sulfur metabolism were detected at the 67.67°E field. These genomes associated with chemosynthetic pathways distinct from bottom-water communities offer insights into microbial transformation of hydrothermal constituents in deep-sea vent environments.
DOI: 10.15468/dl.vfrpuh
title: Occurrence Download

description: A dataset containing 1725530 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nepal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1725530 records from 509 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012714-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/2vr-lpe-6nq
title: Turridae H. Adams & A. Adams, 1853 (1838)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a84-lwy-0qm
title: Terebridae Mörch, 1852

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mf7-28a-yg7
title: Macteola anomala (Angas, 1877)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g4l-pw8-s0n
title: Zospeum isselianum Pollonera, 1887

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zne-0dv-195
title: Cyrillia linearis (Montagu, 1803)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ga5-x32-7qe
title: Canalispira fallax (E. A. Smith, 1903)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.