cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.a2d39q
title: Occurrence Download

description: A dataset containing 1922 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((129.83723 -41.25579,166.16277 -41.25579,166.16277 -26.74421,129.83723 -26.74421,129.83723 -41.25579))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bossiaea foliosa A.Cunn."
 ]
}

 The dataset includes 1922 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005082-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id409411.2
title: StrainInfo SI-ID 409411.2

description: StrainInfo dataset 409411 about a strain of Actinotignum schaalii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id409412.2
title: StrainInfo SI-ID 409412.2

description: StrainInfo dataset 409412 about a strain of Escherichia coli. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id409413.2
title: StrainInfo SI-ID 409413.2

description: StrainInfo dataset 409413 about a strain of Brevibacillus parabrevis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.13140/rg.2.2.27697.44647
title: Supplementary Review Report of From Uneventful Energy to Manifested Universes.
DOI: 10.5281/zenodo.18137791
title: ГАРАНТИИ ПРОЦЕССУАЛЬНОЙ НЕЗАВИСИМОСТИ СЛЕДОВАТЕЛЯ В СИСТЕМЕ УГОЛОВНО-ПРОЦЕССУАЛЬНЫХ ОТНОШЕНИЙ

description: Данная научная статья посвящена глубокому теоретическому и практическому анализу вопроса процессуальной независимости следователя в системе уголовно-процессуального права. Обосновано, что справедливое, беспристрастное и законное осуществление уголовного правосудия в условиях построения демократического правового государства напрямую связано, прежде всего, с самостоятельной деятельностью следственных органов и следователя в досудебном производстве. В исследовании широко освещены правовая природа уголовно-процессуальных отношений, место и роль следователя в них, презумпция невиновности, процессуальные полномочия и ответственность следователя в обеспечении прав и свобод человека.

В статье анализируются нормы Уголовно-процессуального кодекса Республики Узбекистан и на научно-критической основе показано, что процессуальный статус и функции следователя и дознавателя четко не определены в нормативном аспекте. Также посредством сравнительно-правового анализа освещено, как в уголовно-процессуальном законодательстве Казахстана, Кыргызстана, Российской Федерatsiи, Украины, Азербайджана и ряда других зарубежных стран нормативно закреплены процессуальный статус и независимость следователя.

В статье научно обосновано, что процессуальная самостоятельность следователя не ограничивается только свободой принятия решений, но и неразрывно связана с его внутренним убеждением, профессиональной ответственностью и обязанностью всесторонне, полно и беспристрастно расследовать дело. В целях совершенствования нatsiонального уголовно-процессуального законодательства автором разработаны научные выводы и предложения по нормативному определению понятия "следователь" в УПК, четкому определению его процессуального статуса и гарантий независимости. Результаты данного исследования послужат обогащению теории уголовно-процессуального права, а также повышению эффективности следственной практики.
DOI: 10.5281/zenodo.18137792
title: ГАРАНТИИ ПРОЦЕССУАЛЬНОЙ НЕЗАВИСИМОСТИ СЛЕДОВАТЕЛЯ В СИСТЕМЕ УГОЛОВНО-ПРОЦЕССУАЛЬНЫХ ОТНОШЕНИЙ

description: Данная научная статья посвящена глубокому теоретическому и практическому анализу вопроса процессуальной независимости следователя в системе уголовно-процессуального права. Обосновано, что справедливое, беспристрастное и законное осуществление уголовного правосудия в условиях построения демократического правового государства напрямую связано, прежде всего, с самостоятельной деятельностью следственных органов и следователя в досудебном производстве. В исследовании широко освещены правовая природа уголовно-процессуальных отношений, место и роль следователя в них, презумпция невиновности, процессуальные полномочия и ответственность следователя в обеспечении прав и свобод человека.

В статье анализируются нормы Уголовно-процессуального кодекса Республики Узбекистан и на научно-критической основе показано, что процессуальный статус и функции следователя и дознавателя четко не определены в нормативном аспекте. Также посредством сравнительно-правового анализа освещено, как в уголовно-процессуальном законодательстве Казахстана, Кыргызстана, Российской Федерatsiи, Украины, Азербайджана и ряда других зарубежных стран нормативно закреплены процессуальный статус и независимость следователя.

В статье научно обосновано, что процессуальная самостоятельность следователя не ограничивается только свободой принятия решений, но и неразрывно связана с его внутренним убеждением, профессиональной ответственностью и обязанностью всесторонне, полно и беспристрастно расследовать дело. В целях совершенствования нatsiонального уголовно-процессуального законодательства автором разработаны научные выводы и предложения по нормативному определению понятия "следователь" в УПК, четкому определению его процессуального статуса и гарантий независимости. Результаты данного исследования послужат обогащению теории уголовно-процессуального права, а также повышению эффективности следственной практики.
DOI: 10.6084/m9.figshare.28935206
title: Polycyclic aromatic hydrocarbons across global reservoirs

description: A meta-analysis dataset comprising 1,154 samples from 144 reservoirs across five continents.
DOI: 10.6084/m9.figshare.28935206.v1
title: Polycyclic aromatic hydrocarbons across global reservoirs

description: A meta-analysis dataset comprising 1,154 samples from 144 reservoirs across five continents.
DOI: 10.5281/zenodo.18137786
title: Preliminary Literature Review Dataset on Contemporary Leadership

description: This dataset presents the results of a structured literature review conducted as part of doctoral research on contemporary leadership frameworks. It includes metadata and thematic classifications for 295 peer-reviewed journal articles published between 2017 and 2025, sourced from Scopus and Wiley Online Library. No full-text articles or confidential data are included.

Articles were screened using Covidence and coded according to leadership model types, principles, organizational outcomes, and focus areas such as generational leadership, diversity, and innovation. Final data were analyzed using SPSS and organized into six Excel sheets: article metadata, thematic codes, frequency tables, comparative summaries, and principle mappings. 

This dataset is publicly shared to promote transparency, reproducibility, and open science in leadership and organizational research.

The data are compatible with Excel, SPSS, R, and Python, and follow FAIR data principles. Licensed under CC BY 4.0.
DOI: 10.6084/m9.figshare.27191856
title: HDSVT: High-Density Semantic Vehicle Trajectory Dataset Based on a Cosmopolitan City Bridge

description: Trajectory prediction is crucial for autonomous driving, necessitating robust models supported by comprehensive datasets. Most existing vehicle trajectory datasets often lack long-duration trajectories or high vehicle density, limiting their use in complex scenarios. In this paper, we construct a High-Density Semantic Vehicle Trajectory Dataset (HDSVT), collected via Unmanned Aerial Vehicles (UAVs) over the Guangzhou Bridge. Our dataset is characterized by higher vehicle density, extended trajectory lengths, and semantic enhancements, which facilitate in-depth vehicle trajectory analysis. We provide its original UAV videos, after processing these videos, our dataset is divided into three parts: (i) pixel coordinates of vehicle trajectory and lane lines in each video, (ii) corresponding geographic coordinates and (iii) semantic promotion for trajectories and motions. In this high-density, long-range trajectory context, the dataset captures diverse driving behaviors and complex multi-vehicle interaction. With its rich data on diverse driving behaviors and complex multi-vehicle interactions, this dataset is not only suitable for trajectory and motion prediction but also serves broader applications in driving decision-making, traffic management, and long-term tracking of small objects.
DOI: 10.6084/m9.figshare.27191856.v1
title: HDSVT: High-Density Semantic Vehicle Trajectory Dataset Based on a Cosmopolitan City Bridge

description: Trajectory prediction is crucial for autonomous driving, necessitating robust models supported by comprehensive datasets. Most existing vehicle trajectory datasets often lack long-duration trajectories or high vehicle density, limiting their use in complex scenarios. In this paper, we construct a High-Density Semantic Vehicle Trajectory Dataset (HDSVT), collected via Unmanned Aerial Vehicles (UAVs) over the Guangzhou Bridge. Our dataset is characterized by higher vehicle density, extended trajectory lengths, and semantic enhancements, which facilitate in-depth vehicle trajectory analysis. We provide its original UAV videos, after processing these videos, our dataset is divided into three parts: (i) pixel coordinates of vehicle trajectory and lane lines in each video, (ii) corresponding geographic coordinates and (iii) semantic promotion for trajectories and motions. In this high-density, long-range trajectory context, the dataset captures diverse driving behaviors and complex multi-vehicle interaction. With its rich data on diverse driving behaviors and complex multi-vehicle interactions, this dataset is not only suitable for trajectory and motion prediction but also serves broader applications in driving decision-making, traffic management, and long-term tracking of small objects.
DOI: 10.6084/m9.figshare.29594627
title: Numerical Signature Dataset of Curculionidae and Tenebrionidae Beetle Fragments for ML Identification

description: Image Processing, Numerical Signature, Machine Learning
DOI: 10.6084/m9.figshare.29594627.v1
title: Numerical Signature Dataset of Curculionidae and Tenebrionidae Beetle Fragments for ML Identification

description: Image Processing, Numerical Signature, Machine Learning
DOI: 10.6084/m9.figshare.26511043
title: Structural insights into Pseudomonas aeruginosa lysine-specific uptake mechanism for extremely low pH regulation

description: The dataset denotes the cryo-EM maps and model files for the cryo-EM structure of lysine-specific permease bound to L-lysine and in complex with a nanobody.
Electron microscopy sample preparation and data acquisition:
The cryo-EM grids were prepared by applying 3 μL of the LysP-Nb5755 complex protein at 2 mg/mL in buffer containing 100 mM NaCl, 20 mM Tris-HCl pH 7.5, 0.03 %(w/v) DDM and 10 mM L-lysine, to a glow-discharged Quantifoil R1.2/1.3 200/300-mesh copper/gold holey carbon grid (QUANTIFOIL, Micro Tools GmbH, Germany) and blotted for 3.0 s under conditions of 100% relative humidity and 4°C before being plunged into liquid ethane using a Mark IV Vitrobot (FEI). Grids were screened in a 200 keV Talos Arctica microscope (Thermo Fisher) at Uppsala University, Sweden and the Membrane Protein Lab, Diamond Light Source Ltd., UK cryo-EM imaging facilities. Micrographs were acquired on a Titan Krios microscope (FEI) operated at 300 kV with a K2 Summit direct electron detector (Gatan) at the cryo-EM Swedish National Facility in Stockholm. SerialEM software was used for automated data collection following standard procedures. A calibrated magnification of ×130,000 was used for imaging, yielding a pixel size of 0.67 Å on images. The defocus range was set from −0.8 to −2.4 μm. Each micrograph was dose-fractionated to 50 frames under a dose rate of 7 - 8 electrons.pixel-1.s-1, with a total exposure time of 8 s, resulting in a total dose of ~80 electrons.Å-2.
Cryo-EM data processing, model building, and structure analysis:
The data set was processed using CryoSPARC64. The dose fractionated movie frames were aligned using “patch motion correction”, contrast transfer function (CTF) were estimated using “Patch CTF estimation”, the particles were picked using automated blob picker and extracted by binning 6 times in cryoSPARC live. Afterwards, several rounds of 2D classifications were performed. Finally, good particles were selected and extracted by binning equal to 1.0 Å.pixiel-1. 177,424 particles were further used for ab initio maps and heterogeneous refinements. After refinement, 145,063 particles were selected. Several rounds of non-uniform refinement and local refinement were performed. To remove bad particles, further phase randomized heterogeneous refinement was performed with low-pass filter 8 Å, 20 Å and 40 Å. The 78,459 particles were selected and local refinement with a tight mask was performed. The resolution reached 3.68 Å at the gold standard FSC resolution value of 0.143. The local resolution was calculated in CryoSPARC64. 
An AlphaFold 265 model of LysP was automatically fitted into the cryo-EM density map of our inward-facing state. Iterative model building and real space refinement were performed using COOT and PHENIX.refine.
DOI: 10.6084/m9.figshare.26511043.v1
title: Structural insights into Pseudomonas aeruginosa lysine-specific uptake mechanism for extremely low pH regulation

description: The dataset denotes the cryo-EM maps and model files for the cryo-EM structure of lysine-specific permease bound to L-lysine and in complex with a nanobody.
Electron microscopy sample preparation and data acquisition:
The cryo-EM grids were prepared by applying 3 μL of the LysP-Nb5755 complex protein at 2 mg/mL in buffer containing 100 mM NaCl, 20 mM Tris-HCl pH 7.5, 0.03 %(w/v) DDM and 10 mM L-lysine, to a glow-discharged Quantifoil R1.2/1.3 200/300-mesh copper/gold holey carbon grid (QUANTIFOIL, Micro Tools GmbH, Germany) and blotted for 3.0 s under conditions of 100% relative humidity and 4°C before being plunged into liquid ethane using a Mark IV Vitrobot (FEI). Grids were screened in a 200 keV Talos Arctica microscope (Thermo Fisher) at Uppsala University, Sweden and the Membrane Protein Lab, Diamond Light Source Ltd., UK cryo-EM imaging facilities. Micrographs were acquired on a Titan Krios microscope (FEI) operated at 300 kV with a K2 Summit direct electron detector (Gatan) at the cryo-EM Swedish National Facility in Stockholm. SerialEM software was used for automated data collection following standard procedures. A calibrated magnification of ×130,000 was used for imaging, yielding a pixel size of 0.67 Å on images. The defocus range was set from −0.8 to −2.4 μm. Each micrograph was dose-fractionated to 50 frames under a dose rate of 7 - 8 electrons.pixel-1.s-1, with a total exposure time of 8 s, resulting in a total dose of ~80 electrons.Å-2.
Cryo-EM data processing, model building, and structure analysis:
The data set was processed using CryoSPARC64. The dose fractionated movie frames were aligned using “patch motion correction”, contrast transfer function (CTF) were estimated using “Patch CTF estimation”, the particles were picked using automated blob picker and extracted by binning 6 times in cryoSPARC live. Afterwards, several rounds of 2D classifications were performed. Finally, good particles were selected and extracted by binning equal to 1.0 Å.pixiel-1. 177,424 particles were further used for ab initio maps and heterogeneous refinements. After refinement, 145,063 particles were selected. Several rounds of non-uniform refinement and local refinement were performed. To remove bad particles, further phase randomized heterogeneous refinement was performed with low-pass filter 8 Å, 20 Å and 40 Å. The 78,459 particles were selected and local refinement with a tight mask was performed. The resolution reached 3.68 Å at the gold standard FSC resolution value of 0.143. The local resolution was calculated in CryoSPARC64. 
An AlphaFold 265 model of LysP was automatically fitted into the cryo-EM density map of our inward-facing state. Iterative model building and real space refinement were performed using COOT and PHENIX.refine.
DOI: 10.6084/m9.figshare.27686151
title: Biologically informed deep learning integrating drug representations for breast cancer treatment selection

description: Breast cancer transcriptome and clinical data to train the model described in the manuscript. Train_transcriptome_clean.csv and Train_clincal_information_clean.csv are the cleaned transcriptome and clinical data in the training dataset. Validation_transcriptome_clean.csv and Validation_clincal_information_clean.csv are the cleaned transcriptome and clinical data in the validation dataset.
DOI: 10.6084/m9.figshare.27686151.v1
title: Biologically informed deep learning integrating drug representations for breast cancer treatment selection

description: Breast cancer transcriptome and clinical data to train the model described in the manuscript. Train_transcriptome_clean.csv and Train_clincal_information_clean.csv are the cleaned transcriptome and clinical data in the training dataset. Validation_transcriptome_clean.csv and Validation_clincal_information_clean.csv are the cleaned transcriptome and clinical data in the validation dataset.
DOI: 10.6084/m9.figshare.30993322
title: Metabolite BridgeDb ID Mapping Database (20260102)

description: BridgeDb ID mapping database for metabolites, using HMDB (Release of January 2026), ChEBI (Release of 247), and Wikidata (2 January 2026) as data sources.
DOI: 10.6084/m9.figshare.30993322.v1
title: Metabolite BridgeDb ID Mapping Database (20260102)

description: BridgeDb ID mapping database for metabolites, using HMDB (Release of January 2026), ChEBI (Release of 247), and Wikidata (2 January 2026) as data sources.
DOI: 10.6084/m9.figshare.28303499
title: Interferon Dependent Immune Memory during HSV-1 Neuronal Latency Results in Increased H3K9me3 and Restriction of Reactivation by ATRX

description: All source data relating to the figures
DOI: 10.6084/m9.figshare.28303499.v1
title: Interferon Dependent Immune Memory during HSV-1 Neuronal Latency Results in Increased H3K9me3 and Restriction of Reactivation by ATRX

description: All source data relating to the figures
DOI: 10.6084/m9.figshare.28792415
title: Renal insulin-like growth factor binding-protein 7 is a critical promoter of progressive diabetic kidney disease

description: Renal tubulointerstitial abnormalities predict diabetic kidney disease (DKD) progression, and targeting them may prevent DKD. Insulin-like growth factor binding-protein 7 (IGFBP7) is expressed in renal tubular cells and is elevated in both blood and urine during the early stages of human diabetes, serving as a predictor of the rate of disease progression. We showed that tubule- and glomerular-specific IGFBP7 promotes DKD, with tubular-derived IGFBP7 disrupting the renal microenvironment. IGFBP7 impairs mitochondrial bioenergetics in tubular cells, causing lipid accumulation, cell cycle arrest, interstitial inflammation, fibrosis, and glomerulosclerosis. These findings were substantiated by transgenic overexpression and the specific deletion of IGFBP7 in type 1/2 DKD mice. Mechanistically, IGFBP7 interacts with STAT3, promoting its acetylation/dimerization and downregulating mitochondrial bioenergetics. Our study identified levomefolic acid as a novel inhibitor of IGFBP7 and demonstrated its efficacy in mitigating the progression of DKD. Here we show IGFBP7 is a promising therapeutic target for DKD.
DOI: 10.6084/m9.figshare.28792415.v1
title: Renal insulin-like growth factor binding-protein 7 is a critical promoter of progressive diabetic kidney disease

description: Renal tubulointerstitial abnormalities predict diabetic kidney disease (DKD) progression, and targeting them may prevent DKD. Insulin-like growth factor binding-protein 7 (IGFBP7) is expressed in renal tubular cells and is elevated in both blood and urine during the early stages of human diabetes, serving as a predictor of the rate of disease progression. We showed that tubule- and glomerular-specific IGFBP7 promotes DKD, with tubular-derived IGFBP7 disrupting the renal microenvironment. IGFBP7 impairs mitochondrial bioenergetics in tubular cells, causing lipid accumulation, cell cycle arrest, interstitial inflammation, fibrosis, and glomerulosclerosis. These findings were substantiated by transgenic overexpression and the specific deletion of IGFBP7 in type 1/2 DKD mice. Mechanistically, IGFBP7 interacts with STAT3, promoting its acetylation/dimerization and downregulating mitochondrial bioenergetics. Our study identified levomefolic acid as a novel inhibitor of IGFBP7 and demonstrated its efficacy in mitigating the progression of DKD. Here we show IGFBP7 is a promising therapeutic target for DKD.
DOI: 10.15468/dl.np8q7k
title: Occurrence Download

description: A dataset containing 52570 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hypsipetes amaurotis)",
 "Country is one of (Philippines, Korea, Republic of, Japan, China, Chinese Taipei, Thailand, Viet Nam, Cambodia, Lao People’s Democratic Republic, Mongolia, Myanmar)",
 "Month is one of (May, June, July)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2024",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Human Observation, Observation)"
 ]
}

 The dataset includes 52570 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071578-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xmkrhe
title: Occurrence Download

description: A dataset containing 8305 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ailanthus altissima (Mill.) Swingle",
 "Country is Spain",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 8305 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001113-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p4gn2c
title: Occurrence Download

description: A dataset containing 1270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aloe maculata All.",
 "Country is Spain",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 1270 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001114-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wy8s2b
title: Occurrence Download

description: A dataset containing 651 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aloe vera (L.) Burm.f.",
 "Country is Spain",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 651 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001115-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.