cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/cc3djnn
title: CCDC 101421: Experimental Crystal Structure Determination

description: Related Article: C.Crevisy, B.Herbage, M.-L.Marrel, L.Toupet, R.Gree|1998|Eur.J.Org.Chem.|1998|1949|doi:10.1002/(SICI)1099-0690(199809)1998:9<1949::AID-EJOC1949>3.3.CO;2-#
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3jrbp
title: CCDC 105472: Experimental Crystal Structure Determination

description: Related Article: G.Rother, H.Worzala, U.Bentrup|1998|Z.Anorg.Allg.Chem.|624|1706|doi:10.1002/(SICI)1521-3749(199810)624:10<1706::AID-ZAAC1706>3.3.CO;2-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3ccqj
title: CCDC 100307: Experimental Crystal Structure Determination

description: Related Article: D.Veghini, M.W.Day, J.E.Bercaw|1998|Inorg.Chim.Acta|280|226|doi:10.1016/S0020-1693(98)00061-9
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3cxw7
title: CCDC 100839: Experimental Crystal Structure Determination

description: Related Article: N.Marsich, G.Nardin, L.Randaccio, A.Camus|1998|Inorg.Chim.Acta|278|237|doi:10.1016/S0020-1693(98)00024-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3gvm0
title: CCDC 103652: Experimental Crystal Structure Determination

description: Related Article: R.E.Patterson, S.W.Gordon-Wylie, C.G.Woomer, R.E.Norman, S.T.Weintraub, C.P.Horwitz, T.J.Collins|1998|Inorg.Chem.|37|4748|doi:10.1021/ic9803661
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3wgv8
title: CCDC 115780: Experimental Crystal Structure Determination

description: Related Article: M.Mascal, J.Hansen, A.J.Blake, Wan-Sheung Li|1998|Chem.Commun.||355|doi:10.1039/a707354b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3wgw9
title: CCDC 115781: Experimental Crystal Structure Determination

description: Related Article: M.Mascal, J.Hansen, A.J.Blake, Wan-Sheung Li|1998|Chem.Commun.||355|doi:10.1039/a707354b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccr9qmc
title: CCDC 694543: Experimental Crystal Structure Determination

description: Related Article: K.Murayama, K.Aoki|1998|Chem.Commun.||607|doi:10.1039/a800340h
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cctx5vq
title: CCDC 771864: Experimental Crystal Structure Determination

description: Related Article: K.N.Power, T.L.Hennigar, M.J.Zaworotko|1998|Chem.Commun.||595|doi:10.1039/a708943k
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4vjzg
title: CCDC 144676: Experimental Crystal Structure Determination

description: Related Article: C.L.Raston, B.W.Skelton, V.-A.Tolhurst, A.H.White|2000|J.Chem.Soc.,Dalton Trans.||1279|doi:10.1039/a909338i
description: Related Article: P.C.Andrews, C.L.Raston, B.W.Skelton, V.-A.Tolhurst, A.H.White|1998|Chem.Commun.||575|doi:10.1039/a705711c
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccr9qnd
title: CCDC 694544: Experimental Crystal Structure Determination

description: Related Article: K.N.Rose, L.J.Barbour, G.W.Orr, J.L.Atwood|1998|Chem.Commun.||407|doi:10.1039/a707802a
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3s0b6
title: CCDC 112447: Experimental Crystal Structure Determination

description: Related Article: G.E.Herberich, H.J.Eckenrath, U.Englert|1997|Organometallics|16|4292|doi:10.1021/om970422q
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccs9kd0
title: CCDC 724172: Experimental Crystal Structure Determination

description: Related Article: Hoi-Lun Kwong, Wing-Sze Lee, Hung-Foon Ng, Wing-Hong Chiu, Wing-Tak Wong|1998|J.Chem.Soc.,Dalton Trans.||1043|doi:10.1039/a706754b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3s0c7
title: CCDC 112448: Experimental Crystal Structure Determination

description: Related Article: G.E.Herberich, H.J.Eckenrath, U.Englert|1997|Organometallics|16|4292|doi:10.1021/om970422q
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3s0d8
title: CCDC 112449: Experimental Crystal Structure Determination

description: Related Article: G.E.Herberich, H.J.Eckenrath, U.Englert|1997|Organometallics|16|4292|doi:10.1021/om970422q
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3clyz
title: CCDC 100531: Experimental Crystal Structure Determination

description: Related Article: U.Herber, E.Bleuel, O.Gevert, M.Laubender, H.Werner|1998|Organometallics|17|10|doi:10.1021/om970784y
description: Related Article: E.Bleuel, P.Schwab, M.Laubender, H.Werner|2001|J.Chem.Soc.,Dalton Trans.||266|doi:10.1039/b008354m
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3w68f
title: CCDC 115514: Experimental Crystal Structure Determination

description: Related Article: U.Herber, E.Bleuel, O.Gevert, M.Laubender, H.Werner|1998|Organometallics|17|10|doi:10.1021/om970784y
description: Related Article: U.Herber, R.G.Sanchez, O.Gevert, M.Laubender, H.Werner|2001|New J.Chem.|25|396|doi:10.1039/b008601k
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3jfbc
title: CCDC 105162: Experimental Crystal Structure Determination

description: Related Article: J.Niesmann, U.Klingebiel, M.Schafer, R.Boese|1998|Organometallics|17|947|doi:10.1021/om9710430
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25790/bml0cm.186
title: Mid-Space-Independent and Intermediate Deformable Image Registration
DOI: 10.15468/dl.sdfg9j
title: Occurrence Download

description: A dataset containing 4265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vultur gryphus",
 "Country is Peru",
 "HasCoordinate is true",
 "Year is greater than or equal to 2018",
 "Year is less than or equal to 2025",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Specimen)"
 ]
}

 The dataset includes 4265 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011642-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.unat7n
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004808-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j3zfnn
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex vallis-rosetto K.Schum."
 ]
}

 The dataset includes 51 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0125281-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.szzpg1
title: Occurrence Download

description: A dataset containing 212687283 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plantae"
 ]
}

 The dataset includes 212687283 records from 3639 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000176-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6075/j0bv7fzr
title: CIL:42451, Homo sapiens, embryonic stem cell. In Cell Image Library

description: Cells were fixed with formaldehyde, permeabilized using Triton X-100, and stained with anti-Bax antibody 6A7 which is specific to the active form (red) and Hoechst dye to stain nuclei (red). Images were recorded on a Hamamatsu ORCA-ER digital camera mounted on a Leica DMIRE2 inverted microscope.
See also: 
Dumitru R, Gama V, Fagan BM, Bower JJ, Swahari V, Pevny LH, Deshmukh M. 2012. Human embryonic stem cells have constitutively active Bax at the Golgi and are primed to undergo rapid apoptosis. Mol Cell. 46(5):573-83.
description: Immunofluorescence image of Human Embryonic Stem cells stained with an antibody to the active form of Bax (red) and Hoechst (blue). The distribution of Bax, an apoptosis mediator indicates that it resides in the Golgi apparatus under these conditions.
description: Preparation: formaldehyde fixed tissue
Relation to intact cell: whole mounted tissue
Item type: charge coupled device (CCD)
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of epitope; differences in adsorption or binding of stain
Visualization methods: Hoechst 33258; Alexa Fluor 488
Data qualification: Processed
DOI: 10.6075/j0qn65s5
title: CIL:2836, Caenorhabditis elegans. In Cell Image Library

description: The purpose of the dataset C. elegans terminal bulb aging is to deduce the age of the nemathode based on images of the pharynx terminal bulb (part of the eating apparatus). Images of C. elegans were taken at different chronological ages. This image is part of the day 8 data set. Note that the morphological and chronological ages are not fully correlated due to the variability among individuals even though the individuals are genetically identical. The source for the dataset is Laboratory of Genetics/NIA/NIH.
description: Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: differential interference contrast microscopy
Parameter imaged: optical path length gradient
Source of contrast: boundaries between regions with different refractive index
Visualization methods: visualization of contiguous regions
Processing history: unprocessed raw data
description: Terminal Bulb is a dataset of DIC (differential interference contrast) 20x microscopy images of the pharynx terminal bulb of C. elegans at different ages (0, 2, 4, 6, 8, 10, 12 days). Note that the data sets for each age can be found by searching for a featured image from each set: CIL 1587, 1694, 1905, 2213, 2622, 2544, and 2606, respectively.
DOI: 10.6075/j03n222d
title: CIL:35272, Danio rerio, embryonic cell. In Cell Image Library

description: Zebrafish development from cleavage until tailbud formation. This video made available through Mark Cooper and Zebrafish - The Living Laboratory.
description: Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: bright-field microscopy
Parameter imaged: absorption of illumination
Source of contrast: differences in intrinsic optical density
Visualization methods: visualization of contiguous regions
Processing history: unprocessed raw data
Data qualification: Raw
DOI: 10.6075/j0dr2v8f
title: CIL: 52047, Homo sapiens. In Cell Image Library

description: Imaging mode: Fluoresence
Visualization methods: objective based TIRFM using a modified Nikon TE-2000U (60x 1.49 N.A. TIRF objective) and illumination from a 532-nm solid-state laser with power modification by neutral-density filters
description: This assay utilizes physiological concentrations class I PI3Ka, 1mM ATP, drug identified in subfolder, and saturating concentrations of fluorescently-labeled GRP-PH domain, a PIP3 product lipid binder, in order to count each product lipid produced. Enzyme rates are calculated as the slope of product lipid created vs. time. 21.5 ± 0.5°C.

Images are provided as uncorrected, 16 bit .nd2 files to preserve all original data. To view these .nd2 files:
1. Download ImageJ viewer at (https://imagej.nih.gov/ij/download.html)
2. Download the BioFormats.jar package at (https://www.openmicroscopy.org/bio-formats/downloads/)
3. Open the ImageJ directory after installation and drag the extracted BioFormats.jar package into the "Plugins" subdirectory
4. Open an .nd2 image using imageJ and select opening options when prompted, if desired. If no modifications are desired, select "OK"
5. The 16 bit image will typically look dark and will require brightness adjustment.
6. In the ImageJ toolbar, select Image &gt;&gt; Adjust &gt;&gt; Brightness/Contrast and select "Auto", or manually set the brightness and contrast.
description: A single molecule TIRFM assay was employed to measure the kinase activity of purified PI3K molecules on a supported lipid bilayer by counting the number of product PIP3 molecules they produce.
DOI: 10.6075/j0ff3rdk
title: CIL:6563, Oryctolagus cuniculus, skeletal muscle cell. In Cell Image Library

description: Rabbit psoas skeletal muscle fibers were held at constant length and rigor induced by immersion in glycerol. The fibers were fixed in buffered glutaraldehyde, treated with tannic acid and quick-frozen by contact with a liquid helium-cooled copper block in a Heuser-type cryopress, and freeze-etched in a Balzers 400 freeze fracture machine. The sample was then rotary-replicated with Pt-C at 24 degrees and visualized in a JEOL 100CX2 transmission electron microscope operated at 100 kev.

This image was recorded on Kodak 4489 film at 75,000x magnification. Stereo pairs were taken at +5 and -5 degrees. Films were scanned with a 20 micrometer pixel spacing on a Nikon Coolscan 9000ED scanner.

Stereo pair with CIL:6562.
description: Preparation: glutaraldehyde fixed tissue; freeze_fracture/freeze_etch
Relation to intact cell: isolated subcellular component
Item type: recorded image
Imaging mode: transmission electron microscopy (TEM); wide-field detection; widefield illumination; illumination by electrons; detection of electrons
Parameter imaged: electron density; elevation
Source of contrast: differences in deposition of metal shadow
Visualization methods: shadowing and plating
Processing history: unprocessed raw data
DOI: 10.6075/j0m61j8p
title: CIL:2863, Colpoda cucullus, cell by organism, eukaryotic cell, Eukaryotic Protist, Ciliated Protist. In Cell Image Library

description: Preparation: glutaraldehyde fixed tissue; osmium tetroxide fixed tissue; tissue in epoxy resin embedment; microtome-sectioned tissue
Relation to intact cell: microtome-sectioned tissue
Item type: transmission electron microscopy (TEM); illumination by electrons
Imaging mode: detection of electrons; film
Parameter imaged: electron density
Source of contrast: stain with broad specificity
Visualization methods: stain with broad specificity; osmium tetroxide; uranyl salt; lead salt
Processing history: recorded image; film; unprocessed raw data
Data qualification: Raw;spatialmeasurements;intensitiesquantitation
description: A high resolution image of the base of a dikinetid deeper in the cell. A postciliary ribbon and other microtubules fan out from it's basal bodies. TEM taken on 6/3/69 by R. Allen with Philips 300 operating at 60kV. Neg. 14,800X. The raw film was digitized by scanning with a Nikon Coolscan 9000ED. This image is suitable for quantitative analysis. Standard glutaraldehyde fixation followed by osmium tetroxide, dehydrated in alcohol and embedded in an epoxy resin. Microtome sections were prepared at approximately 75nm thickness. Additional information is available at (http://www5.pbrc.hawaii.edu/allen/).
DOI: 10.6075/j0x929sq
title: CIL: 52119, Homo sapiens. In Cell Image Library

description: Imaging mode: Fluoresence
Visualization methods: objective based TIRFM using a modified Nikon TE-2000U (60x 1.49 N.A. TIRF objective) and illumination from a 532-nm solid-state laser with power modification by neutral-density filters
description: This assay utilizes physiological concentrations class I PI3Ka, 1mM ATP, drug identified in subfolder, and saturating concentrations of fluorescently-labeled GRP-PH domain, a PIP3 product lipid binder, in order to count each product lipid produced. Enzyme rates are calculated as the slope of product lipid created vs. time. 21.5 ± 0.5°C

Images are provided as uncorrected, 16 bit .nd2 files to preserve all original data. To view these .nd2 files:
1. Download ImageJ viewer at (https://imagej.nih.gov/ij/download.html)
2. Download the BioFormats.jar package at (https://www.openmicroscopy.org/bio-formats/downloads/)
3. Open the ImageJ directory after installation and drag the extracted BioFormats.jar package into the "Plugins" subdirectory
4. Open an .nd2 image using imageJ and select opening options when prompted, if desired. If no modifications are desired, select "OK"
5. The 16 bit image will typically look dark and will require brightness adjustment.
6. In the ImageJ toolbar, select Image &gt;&gt; Adjust &gt;&gt; Brightness/Contrast and select "Auto", or manually set the brightness and contrast.
description: A single molecule TIRFM assay was employed to measure the kinase activity of purified PI3K molecules on a supported lipid bilayer by counting the number of product PIP3 molecules they produce.
DOI: 10.6075/j05q4v8p
title: CIL:11904, Haemanthus katharinae, endosperm. In Cell Image Library

description: Dividing cells from the liquid endosperm of the lily Haemanthus katherinae were fixed with paraformaldehye, embedded in epoxy, and 0.5 micrometer sections prepared. Images were obtained with the Wisconsin high voltage TEM at 1MEV. For this micrograph of a chromosome at anaphase, the grid was tilted to 60 degrees. A similar micrograph tilted to 40 degrees is grouped with this image, making a stereo pair that provides an oblique 3D view.
description: Preparation: formaldehyde fixed tissue
Relation to intact cell: microtome-sectioned tissue
Item type: film
Imaging mode: transmission electron microscopy (TEM)
Parameter imaged: electron density
Source of contrast: elastic scattering of electrons
Visualization methods: uranyl salt
Processing history: unprocessed raw data