DOI: 10.6084/m9.figshare.26991211
title: Additional file 1 of Identification, evolution, and expression of GDSL-type Esterase/Lipase (GELP) gene family in three cotton species: a bioinformatic analysis

description: Additional file 1: Supplementary Table 1.  The Gossypium genome sources used in this study. Supplementary Table 2. The orthologous/paralogous gene pairs of GELPs of G. raimondii, G. arboreum, and G. hirsutum. Supplementary Table 3. The Nucleic acid coding region and amino acid sequences of GELP genes of G. hirsutum. Supplementary Table 4. Analysis of the physical and chemical properties of GELP gene sequences in G. raimondii, G. arboreum, and G. hirsutum. Supplementary Table 5. Prediction analysis of the protein conserved structure and potential functional classification of the members of the GELP gene family in G. raimondii, G. arboreum, and G. hirsutum. Supplementary Table 6. The GELP homologous gene pairs that are collinear on each subgenome of G. raimondii, G. arboreum, and G. hirsutum. Supplementary Table 7. The rate of base substitution between sequences of GELP orthologous or paralogous gene pairs in G. raimondii, G. arboreum, and G. hirsutum. Supplementary Table 8. The FPKM value of the expression level of GELP genes specifically expressed in different tissues in G. raimondii, G. arboreum, and G. hirsutum. Supplementary Table 9. The FPKM value of the expression of GELP genes during the fiber initiation and fiber growth in G. hirsutum. Supplementary Table 10. The FPKM value of GELP genes expression in different tissues during seed germination in G. hirsutum. Supplementary Table 11. The FPKM value of expression of GELP genes in response to abiotic stress in G. hirsutum. Supplementary Table 12. The FPKM value of expression of GELP genes in response to stress from Verticillium dahliae in G. hirsutum. Supplementary Table 13. Up-regulated and down-regulated expressed GELP genes at the initial stage of fiber development. Supplementary Table 14. Up-regulated and down-regulated expressed GELP genes during fiber development. Supplementary Table 15. Up-regulated and down-regulated expressed GELP genes during the initial stage of seed germination. Supplementary Table 16. Up-regulated and down-regulated expressed GELP genes in root tissues after seed germination. Supplementary Table 17. Up-regulated and down-regulated expressed GELP genes in cotyledons after seed germination. Supplementary Table 18. Up-regulated and down-regulated expressed GELP genes in response to 20% PEG stress. Supplementary Table 19. Up-regulated and down-regulated expressed GELP genes in response to 4℃ low temperature stress. Supplementary Table 20. Up-regulated and down-regulated expressed GELP genes in response to 38℃ high temperature stress. Supplementary Table 21. Up-regulated and down-regulated expressed GELP genes after 400 mM NaCl stress treatment. Supplementary Table 22. Up-regulated and down-regulated expressed GELP genes in response to Verticillium dahliae. Supplementary Table 23. Statistics of the number of hormone-responsive cis-acting elements locating on the promoters of GELP family members in G. raimondii, G. arboreum, and G. hirsutum. Supplementary Table 24. The RT-qPCR primers used to detect the relative expression of GhGELPs during cotton fiber development and in response to plant hormone treatment.