cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pjbfps
title: Occurrence Download

description: A dataset containing 4833 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Selasphorus rufus (J.F.Gmelin, 1788)"
 ]
}

 The dataset includes 4833 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0275030-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rugbmj
title: Occurrence Download

description: A dataset containing 5165 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is EOD – eBird Observation Dataset",
 "GadmGid is CHN.13.12_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 5165 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0273130-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eak8nx
title: Occurrence Download

description: A dataset containing 36492 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Diglossa plumbea Cabanis, 1861"
 ]
}

 The dataset includes 36492 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050916-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ouzpqg
title: Occurrence Download

description: A dataset containing 278 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Agave kerchovei Lem.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 278 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010129-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pph6pd
title: Occurrence Download

description: A dataset containing 51227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is one of (Elodea nuttallii (Planch.) H.St.John, Heracleum mantegazzianum Sommier & Levier, Hydrocotyle ranunculoides L.fil., Ludwigia grandiflora (Michx.) Greuter & Burdet, Impatiens glandulifera Royle, Myriophyllum aquaticum (Vell.) Verdc., Orconectes limosus (Rafinesque, 1817), Pacifastacus leniusculus (Dana, 1852), Lagarosiphon major (Ridl.) Moss, Lysichiton americanus Hultén & H.St.John, Myriophyllum heterophyllum Michx., Procambarus clarkii (Girard, 1852), Cabomba caroliniana A.Gray, Heracleum persicum Desf. ex Fisch., C.A.Mey. & Avé-Lall., Heracleum sosnowskyi Manden., Ludwigia peploides (Kunth) P.H.Raven, Orconectes virilis (Hagen, 1870), Procambarus fallax f. virginalis Martin, Dorn, Kawai, van der Heiden & Scholtz, 2010)"
 ]
}

 The dataset includes 51227 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075817-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wx5mdj
title: Occurrence Download

description: A dataset listing the 12630 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Plantae of Costa Rica (INBio)"
 ]
}

 The dataset's 12630 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0289346-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvmyf7
title: Occurrence Download

description: A dataset containing 2582 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gallinago nobilis P.L.Sclater, 1856"
 ]
}

 The dataset includes 2582 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278728-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dqazwm
title: Occurrence Download

description: A dataset containing 18138 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-70.04025 -4.12125,-69.99956 -4.16965,-69.94703 -4.22802,-69.94686 -4.23386,-69.93244 -4.21532,-69.93107 -4.19334,-69.94343 -4.15215,-69.98257 -4.12193,-70.00678 -4.11132,-70.02016 -4.10545,-70.04025 -4.12125))",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 18138 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254181-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.36mhc7
title: Occurrence Download

description: A dataset containing 522 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lama glama (Linnaeus, 1758)",
 "Year 2018-2021"
 ]
}

 The dataset includes 522 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007533-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kglei7
title: Occurrence Download

description: A dataset containing 36952 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 {
 "or" : [
 "Country is Peru",
 "Country is Colombia",
 "Country is Bolivia (Plurinational State of)",
 "Country is Ecuador",
 "Country is Brazil",
 "Country is Suriname",
 "Country is Venezuela (Bolivarian Republic of)",
 "Country is Guyana"
 ]
 },
 "Issue is Geodetic datum assumed WGS84",
 "Geometry POLYGON((-81.47461 -22.26876,-32.25586 -22.26876,-32.25586 14.60485,-81.47461 14.60485,-81.47461 -22.26876))",
 "HasCoordinate is true",
 "TaxonKey is Rodentia",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 36952 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010130-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25939930
title: Data extraction for systematic mapping study LLM

description: Data
DOI: 10.6084/m9.figshare.25939930.v1
title: Data extraction for systematic mapping study LLM

description: Data
DOI: 10.15468/dl.sa4juv
title: Occurrence Download

description: A dataset containing 1160 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus alleni Mearns, 1890"
 ]
}

 The dataset includes 1160 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278732-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fz9pia
title: Occurrence Download

description: A dataset containing 289 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Observation"
 ]
 },
 "TaxonKey is Lophornis helenae (Delattre, 1843)"
 ]
}

 The dataset includes 289 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010130-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgkpax
title: Occurrence Download

description: A dataset containing 14107 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aloe vera (L.) Burm.f."
 ]
}

 The dataset includes 14107 records from 223 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0281509-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vx3b8u
title: Occurrence Download

description: A dataset containing 3107 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Country is Colombia",
 "Elevation 1212.0-3000.0m",
 "StateProvince is Santander",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 3107 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012159-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvsnpy
title: Occurrence Download

description: A dataset containing 5953722 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 5953722 records from 3196 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0307454-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4w3hhe
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leptosomiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-30 -30,0 -30,0 0,-30 0,-30 -30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064988-250920141307145/datasets/export for details.
DOI: 10.15468/dl.6wah7r
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Afrocardium richardi",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064986-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9bbxkx
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pheidole megacephala",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017067-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6hpwp5
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pheidole megacephala",
 "Country is Bahamas",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017066-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d9b9nj
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ACH5066"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017068-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m98bby
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypophthalmichthys nobilis",
 "Country is Thailand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017069-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7z95ze
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypophthalmichthys nobilis",
 "Country is Turkmenistan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017070-250717081556266/datasets/export for details.
DOI: 10.15468/dl.rr3ecx
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAV6719"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017072-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2n68yu
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypophthalmichthys nobilis",
 "Country is Ukraine",
 "HasCoordinate is true"
 ]
}

 The dataset includes 31 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017074-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6nucfz
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypophthalmichthys nobilis",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017076-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16150456
title: SemRef
DOI: 10.5281/zenodo.16207822
title: SemRef
DOI: 10.5281/zenodo.15495774
title: Blood immunomap for prediction of responses to aPD1 immunotherapy in metastatic non-small cell lung cancer

description: This repository contains mass cytometry (CyTOF) data generated as part of the study:

"Immune profiling of non-small cell lung cancer (NSCLC) patients undergoing immune checkpoint inhibitor therapy reveals enrichment of CD8⁺PD-L1⁺ T cells in non-responders" ( https://www.sciencedirect.com/science/article/pii/S258900422501065X ).

 

In this study, we performed high-dimensional mass cytometry to construct a peripheral blood immunomap in NSCLC patients with metastatic disease receiving anti-PD-1 immunotherapy. Analysis of responders versus non-responders revealed an expansion of CD8⁺PD-L1⁺ T cells in non-responding individuals. These findings suggest a potential role for this population as a non-invasive biomarker of resistance to immune checkpoint blockade.

 

Contents

1. Mass Cytometry (CyTOF) data





Pre-processed CyTOF data files (cleaned single cell events with gaussian parameters and live/dead exclusion) (FCS format).







Sample metadata with clinical response annotations (md, excel file). 







Antibody panel used for the analysis (annotated markers/metal tags) (panel, excel file). 



 

2. Imaging Mass Cytometry (IMC) data







Raw IMC files (mcd):





            - 5269a.mcd (sample_1): includes ROIs 002 and 003.


            - 6362a.mcd (sample_2): includes ROIs 001, 003, 004 and 005. 





IMC antibody panel used for tissue staining listing metal tags and target markers (excel file).







Image metadata detailing ROI selection and annotations (excel file).




 

Usage

These data can be used for immune profiling, clustering analyses, and identification of immune cell subsets associated with therapy response in NSCLC.

 

This dataset supports a research article currently in press. The DOI of the associated publication will be added upon release.
DOI: 10.5281/zenodo.15148040
title: Blood immunomap for prediction of responses to aPD1 immunotherapy in metastatic non-small cell lung cancer

description: This repository contains mass cytometry (CyTOF) data generated as part of the study:

"Immune profiling of non-small cell lung cancer (NSCLC) patients undergoing immune checkpoint inhibitor therapy reveals enrichment of CD8⁺PD-L1⁺ T cells in non-responders" ( https://www.sciencedirect.com/science/article/pii/S258900422501065X ).

 

In this study, we performed high-dimensional mass cytometry to construct a peripheral blood immunomap in NSCLC patients with metastatic disease receiving anti-PD-1 immunotherapy. Analysis of responders versus non-responders revealed an expansion of CD8⁺PD-L1⁺ T cells in non-responding individuals. These findings suggest a potential role for this population as a non-invasive biomarker of resistance to immune checkpoint blockade.

 

Contents

1. Mass Cytometry (CyTOF) data





Pre-processed CyTOF data files (cleaned single cell events with gaussian parameters and live/dead exclusion) (FCS format).







Sample metadata with clinical response annotations (md, excel file). 







Antibody panel used for the analysis (annotated markers/metal tags) (panel, excel file). 



 

2. Imaging Mass Cytometry (IMC) data







Raw IMC files (mcd):





            - 5269a.mcd (sample_1): includes ROIs 002 and 003.


            - 6362a.mcd (sample_2): includes ROIs 001, 003, 004 and 005. 





IMC antibody panel used for tissue staining listing metal tags and target markers (excel file).







Image metadata detailing ROI selection and annotations (excel file).




 

Usage

These data can be used for immune profiling, clustering analyses, and identification of immune cell subsets associated with therapy response in NSCLC.

 

This dataset supports a research article currently in press. The DOI of the associated publication will be added upon release.
DOI: 10.15468/dl.qaa8cn
title: Occurrence Download

description: A dataset containing 5110 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tilapia sparrmanii"
 ]
}

 The dataset includes 5110 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017078-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jut337
title: Occurrence Download

description: A dataset containing 149461 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Plutella xylostella"
 ]
}

 The dataset includes 149461 records from 487 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017023-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fme6xm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pectinophora gossypiella",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017081-250717081556266/datasets/export for details.
DOI: 10.5281/zenodo.15010687
title: Poison to Cure: Privacy-preserving Wi-Fi Multi-User Sensing via Data Poisoning

description: This is the dataset for "Poison to Cure: Privacy-preserving Wi-Fi Multi-User Sensing via Data Poisoning." The source code can be found at DeepWiSe888/Poison2Cure .
DOI: 10.5281/zenodo.15010688
title: Poison to Cure: Privacy-preserving Wi-Fi Multi-User Sensing via Data Poisoning

description: This is the dataset for "Poison to Cure: Privacy-preserving Wi-Fi Multi-User Sensing via Data Poisoning." The source code can be found at DeepWiSe888/Poison2Cure .
DOI: 10.15468/dl.nnvttf
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pheidole megacephala",
 "Country is Cuba",
 "HasCoordinate is true"
 ]
}

 The dataset includes 45 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017080-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3n78kd
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pheidole megacephala",
 "Country is Cook Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 12 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017079-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wbhzan
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ACA6966"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017083-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ukvd6y
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pheidole megacephala",
 "Country is Dominican Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017085-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z6rbuf
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AEW5305"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017087-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2gjb4h
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pectinophora gossypiella",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 56 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017086-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16207055
title: RGEA Dataset: Dialogue Logs and Et-Score Scripts for "When Structure Speaks
DOI: 10.5281/zenodo.16207056
title: RGEA Dataset: Dialogue Logs and Et-Score Scripts for "When Structure Speaks