cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.abjf8j
title: Occurrence Download

description: A dataset containing 71938633 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters is less than or equal to 20400.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate reprojected",
 "Issue is Coordinate precision invalid",
 "Issue is Footprint SRS invalid",
 "Issue is Footprint WKT invalid",
 "Issue is Country derived from coordinates",
 "Issue is Continent invalid",
 "Issue is Continent derived from coordinates",
 "Issue is Presumed swapped coordinate",
 "Issue is Presumed negated longitude",
 "Issue is Presumed negated latitude",
 "Issue is Recorded date mismatch",
 "Issue is Recorded date invalid",
 "Issue is Recorded date unlikely",
 "Issue is Taxon match fuzzy",
 "Issue is Taxon match higher rank",
 "Issue is Taxon match aggregate",
 "Issue is Taxon match none",
 "Issue is Depth not metric",
 "Issue is Depth unlikely",
 "Issue is Depth min max swapped",
 "Issue is Depth non numeric",
 "Issue is Elevation unlikely",
 "Issue is Elevation min max swapped",
 "Issue is Elevation not metric",
 "Issue is Elevation non numeric",
 "Issue is Modified date invalid",
 "Issue is Modified date unlikely",
 "Issue is Identified date unlikely",
 "Issue is Identified date invalid",
 "Issue is Basis of record invalid",
 "Issue is Type status invalid",
 "Issue is Multimedia date invalid",
 "Issue is Multimedia URI invalid",
 "Issue is References URI invalid",
 "Issue is Error during interpretation",
 "Issue is Individual count invalid",
 "Issue is Individual count conflicts with occurrence status",
 "Issue is Occurrence status unparsable",
 "Issue is Occurrence status inferred from individual count",
 "Issue is ccurrence status inferred from basis of record",
 "Issue is Georeferenced date unlikely",
 "Issue is Georeferenced date invalid",
 "Issue is Ambiguous institution",
 "Issue is Ambiguous collection",
 "Issue is Institution match none",
 "Issue is Collection match none",
 "Issue is Institution match fuzzy",
 "Issue is Collection match fuzzy",
 "Issue is Institution collection mismatch",
 "Issue is Possibly on loan",
 "Issue is Different owner institution"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Insecta",
 "Year 1901-2020"
 ]
}

 The dataset includes 71938633 records from 2251 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0295985-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1425092.10fu
title: SH1425092.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1425093.10fu
title: SH1425093.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1425094.10fu
title: SH1425094.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1425095.10fu
title: SH1425095.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1425627.10fu
title: SH1425627.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1425631.10fu
title: SH1425631.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1425636.10fu
title: SH1425636.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.18232719
title: Metagenome bins assembled from the sponge Xestospongia bergquistia Fromont, 1991

description: This metagenome data accompanies the data note: "The chromosomal genome sequence of the Indo-Pacific barrel sponge, Xestospongia bergquistia Fromont, 1991, and its associated microbial metagenome sequences"
DOI: 10.15156/bio/sh1425638.10fu
title: SH1425638.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.18232718
title: Metagenome bins assembled from the sponge Xestospongia bergquistia Fromont, 1991

description: This metagenome data accompanies the data note: "The chromosomal genome sequence of the Indo-Pacific barrel sponge, Xestospongia bergquistia Fromont, 1991, and its associated microbial metagenome sequences"
DOI: 10.15156/bio/sh1425647.10fu
title: SH1425647.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1425671.10fu
title: SH1425671.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.60712/si-id90000.1
title: StrainInfo SI-ID 90000.1

description: StrainInfo dataset 90000 about a strain of Zygosaccharomyces mellis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90001.1
title: StrainInfo SI-ID 90001.1

description: StrainInfo dataset 90001 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90093.1
title: StrainInfo SI-ID 90093.1

description: StrainInfo dataset 90093 about a strain of Cyberlindnera bimundalis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90094.1
title: StrainInfo SI-ID 90094.1

description: StrainInfo dataset 90094 about a strain of Peterozyma toletana. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90095.1
title: StrainInfo SI-ID 90095.1

description: StrainInfo dataset 90095 about a strain of Peterozyma toletana. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90002.1
title: StrainInfo SI-ID 90002.1

description: StrainInfo dataset 90002 about a strain of Pichia kudriavzevii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90096.1
title: StrainInfo SI-ID 90096.1

description: StrainInfo dataset 90096 about a strain of Schwanniomyces polymorphus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90003.1
title: StrainInfo SI-ID 90003.1

description: StrainInfo dataset 90003 about a strain of Candida friedrichii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90004.1
title: StrainInfo SI-ID 90004.1

description: StrainInfo dataset 90004 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90005.1
title: StrainInfo SI-ID 90005.1

description: StrainInfo dataset 90005 about a strain of Zygosaccharomyces rouxii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90097.1
title: StrainInfo SI-ID 90097.1

description: StrainInfo dataset 90097 about a strain of Scheffersomyces segobiensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90098.1
title: StrainInfo SI-ID 90098.1

description: StrainInfo dataset 90098 about a strain of Schwanniomyces polymorphus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90099.1
title: StrainInfo SI-ID 90099.1

description: StrainInfo dataset 90099 about a strain of Schwanniomyces polymorphus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90156.1
title: StrainInfo SI-ID 90156.1

description: StrainInfo dataset 90156 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90157.1
title: StrainInfo SI-ID 90157.1

description: StrainInfo dataset 90157 about a strain of Wickerhamomyces anomalus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90158.1
title: StrainInfo SI-ID 90158.1

description: StrainInfo dataset 90158 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90159.1
title: StrainInfo SI-ID 90159.1

description: StrainInfo dataset 90159 about a strain of Komagataella pastoris. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90006.1
title: StrainInfo SI-ID 90006.1

description: StrainInfo dataset 90006 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90007.1
title: StrainInfo SI-ID 90007.1

description: StrainInfo dataset 90007 about a strain of Schwanniomyces polymorphus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90008.1
title: StrainInfo SI-ID 90008.1

description: StrainInfo dataset 90008 about a strain of Komagataella pseudopastoris. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90009.1
title: StrainInfo SI-ID 90009.1

description: StrainInfo dataset 90009 about a strain of Zygosaccharomyces rouxii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90100.1
title: StrainInfo SI-ID 90100.1

description: StrainInfo dataset 90100 about a strain of Candida tropicalis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90101.1
title: StrainInfo SI-ID 90101.1

description: StrainInfo dataset 90101 about a strain of Candida santamariae var. santamariae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90102.1
title: StrainInfo SI-ID 90102.1

description: StrainInfo dataset 90102 about a strain of Cyberlindnera bimundalis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90103.1
title: StrainInfo SI-ID 90103.1

description: StrainInfo dataset 90103 about a strain of Candida oregonensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id90160.1
title: StrainInfo SI-ID 90160.1

description: StrainInfo dataset 90160 about a strain of Citeromyces matritensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.