cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28580120.v2
title: <b>Soil microbial networks mediate long-term effects of nitrogen fertilization on ecosystem multiservices</b>

description: We found that soil multiservice predominantly exhibited a hump-shaped response to the increasing levels of N addition across two soil depths. More importantly, changes in the complexity of soil microbial networks were positively correlated with ecosystem multiservices across the two soil depths. This relationship was especially important in explaining topsoil multiservice responses, while in subsoils, multiservices were more strongly associated with abiotic properties than network complexity.
DOI: 10.6084/m9.figshare.29092094.v1
title: Supplementary Material for: Co-occurrence of DNET and Hodgkin's Lymphoma in a patient with Noonan syndrome and mutation in the PTPN11 gene

description: Noonan syndrome (NS) is a genetic disorder which belongs to the RASopathy family, characterized by craniofacial dysmorphisms, short stature, congenital heart defects, and an increased predisposition to malignancies. Although hematologic malignancies, neuroblastomas and certain solid tumors have been documented in NS, the co-occurrence of dysembryoplastic neuroepithelial tumor (DNET) and Hodgkin’s lymphoma, has not been previously reported in the literature. We present the case of an 11-year-old boy with NS caused by a pathogenic variant in the PTPN11 gene who developed both a DNET and Hodgkin's Lymphoma. Notably, the patient had been receiving recombinant human growth hormone (rhGH) therapy prior to tumor diagnosis, raising concerns about potential contributing factors. Through a literature review, we identified reports of DNETs and lymphomas in patients with NS, highlighting the variability in genetic mutations and clinical presentations. However, no predominant PTPN11 variant was associated with a specific tumor predisposition. This case underscores the complex relationship between NS and tumor development, reinforcing the importance of individualized surveillance strategies, particularly in patients undergoing rhGH therapy. Further studies are needed to clarify the oncogenic potential of specific NS-associated mutations and to establish evidence-based guidelines for cancer surveillance in these patients.
DOI: 10.6084/m9.figshare.3552423.v1
title: Appendix B. Derivation of Eq. 6.

description: Derivation of Eq. 6.
DOI: 10.6084/m9.figshare.8216288.v2
title: NSE, S100B and MMP9 Expression Following Reperfusion after Carotid Artery Stenting data

description: <b>Abstract:</b> <b>Objective</b>: Previous studies have shown that the neuron-specific- enolase (NSE), S100B protein (S100B) and matrix metalloproteinase-9 (MMP9) are specific markers for studying cerebral injury. This study was to demonstrate these biomarkers for their correlation with reperfusion after carotid artery stenting (CAS). <b>Method</b>: In this study, a total of 44 patients who were diagnosed unilateral carotid artery stenosis by Digital Subtraction Angiography (DSA) and underwent CAS, were selected as the operation groups. The patients’ blood samples were collected at three different time points: T1, prior to operation; T2, next morning after operation (24 hours); T3, three days after operation (72 hours); All of patients with operation were received Computed Tomography Perfusion (CTP) at T1 and T3. The second group of 12 patients, who were excluded for carotid artery stenosis by DSA, were assigned to be the control group; Blood samples of these patients were collected at T1. The concentrations of NSE, S100B and MMP9 in serum from patients of both groups were detected by ELISA. <b>Results:</b> All of the operations were implanted in stents successfully without complications. (1) After CAS, rCBF increased while rMTT and rTTP decreased. (2) The concentrations of NSE, S100B and MMP9 in the serum decreased gradually (T1&gt;T2&gt;T3). There was no significant difference between the control group and the operation group at T1 (P&gt;0.05) on their concentrations of NSE, S100B and MMP9 in the serum. When compared among the operation groups, the concentrations of NSE, S100B and MMP9 in the serum at T1 and T3 showed significantly difference (P&lt;0.05). (3) Correlation analysis among the operation groups indicated that NSE, S100B, MMP9 and rCBF were positively correlated before operation (r = 0.69, 0.58 and 0.72, respectively, P &lt; 0.05), as well as after operation (r = 0.75, 0.65 and 0.60, respectively, P &lt; 0.05). <b>Conclusion: </b>We concluded that the concentrations of NSE, S100B and MMP9 in serum decreased with the improvement of cerebral reperfusion after CAS. NSE, S100B and MMP9 can be used as laboratory biochemical markers to evaluate the improvement of reperfusion after CAS. The results very well complement the imaging methods, such as CTP.
DOI: 10.6084/m9.figshare.13643837.v2
title: Ground gravity data compilation for Australia version 2.0

description: Compilation of public ground gravity data provided by Geoscience Australia. Based on the compilation by Wynne (2018), which is distributed under a CC-BY 4.0 license (see the source). This version has filtered surveys by data quality, referenced positions and heights to the WGS84 ellipsoid, and packaged the data into a single netCDF file with compression and CF-compliant metadata. Also includes a plain-text CSV version (which does not contain the associated metadata).<br><br>If using this dataset, please cite the original compilation by Wynne (2018) as well as this compilation.<br>Python source code used to download the original survey data and generate this compilation is open-source under the MIT license and can be found at https://github.com/compgeolab/australia-gravity-data
DOI: 10.6084/m9.figshare.14781903.v3
title: 2021 - Sa et al. Marine-mammalsMHC Datasets and Rscripts

description: Datasets and R scripts used for the "Novel insights on aquatic mammal’s MHC evolution: evidence from manatees' DQB diversity" manuscript.
DOI: 10.6084/m9.figshare.20709268.v1
title: Supplementary Material for: The Cutting-EDGE: Biliary Intervention in Altered Anatomy

description: Medicine
DOI: 10.6084/m9.figshare.21347721.v3
title: Carbon-water flux datasets of Eurasian meteorological stations

description: Mining carbon-water flux information from more widely distributed meteorological stations has great potential to deal with the challenge of insufficient observational data on these fluxes. We constructed a new framework to assess the transferability of Eurasian carbon-water flux simulation models (random forest model, RFM) to meteorological stations. We used a combination of the determination coefficient (R<sup>2</sup>) and Euclidean distance to evaluate the match between these models and meteorological station data. Not all meteorological stations could be matched with suitable RFM. Results showed that 84.5% and 99.1% of the meteorological stations (N=4466) satisfying the transfer condition (R<sup>2</sup> ≥ 0.5) could produce the carbon and water fluxes when using remote sensing (RS) variables in RFM construction, respectively. Without the use of RS variables, 68.2% and 98.7% of the meteorological stations (N=6849) satisfying the transfer condition (R<sup>2</sup> ≥ 0.5) could produce the carbon and water fluxes, respectively. The 4 spatio-temporal carbon-water flux datasets with quasi-observational characteristics that we generated at meteorological stations have great potential to improve the accuracy of assessments of ecosystem carbon-water dynamics at regional and global scales (comparison reveals possible overestimation or underestimation in datasets, e.g., FLUXCOM, GOSAT, MODIS, etc.)
DOI: 10.6084/m9.figshare.21393486.v1
title: Water parameters correlated with the zootechnical performance of shrimp Litopenaeus vannamei grown in oligohaline waters

description: ABSTRACT. The present study aimed to correlate the influence of water quality, cultivation time, area, and density of ponds on the zootechnical performance of shrimp Litopenaeus vannamei in oligohaline waters. It was demonstrated that, under the conditions of this research, better control of temperature, pH and water alkalinity can be employed. Ammonia levels were within the normal range and correlated positively with the growth rate (ρ = 0.69859) and production (ρ = 0.66362) of the ponds. There was also a positive correlation between cultivation time and pond density with shrimp weight (ρ = 0.75305 and 0.68933) and pond productivity (ρ = 0.74763 and 0.79367, respectively). Negative correlations were observed between: I) pH with shrimp survival (ρ = -0.73238) and pond production (ρ = -0.68696); II) alkalinity and pond production (ρ = -0.66162). The results show that the cultivation of shrimp L. vannamei in oligohaline waters is viable and there is potential for increased productivity associated with better hydrological monitoring and use of higher density and cultivation time by some producers.
DOI: 10.6084/m9.figshare.997213.v1
title: travel satisfaction and subjective well-being

description: Chinese travelers' satisfaction and their subjective well-being
DOI: 10.17632/rw6hnm6xzb
title: Gene expression of 15 genes in eutopic endometrium of women with endometriosis, adenomyosis and controls measured by NanoString

description: We aimed to validate 15 putative markers involvement in the development of deep infiltrating endometriosis, ovarian endometriosis, and adenomyosis and evaluate their potential as biomarkers for these three conditions. An RNA-Seq discovery study using endometrial samples identified differentially expressed genes. 

The validation by Nanostring (n=285) includes 110 controls, 57 adenomyosis, 60 deep infiltrating endometriosis (DIE), and 58 ovarian endometriosis (OE). RNA was obtained from 285 blocks of formalin-fixed paraffin embedded (FFPE) eutopic endometrial samples by using High Pure FFPET-RNA Isolation Kit (Roche) and quality controls were performed. Then, they were analyzed by Nanostring following manufacturer’s instructions. Post-quality controls were also performed by using nSolver analysis software (Nanostring).

This dataset includes the raw files from the validation study by using a custom NanoString codeset (RCC files) (n=285). The dataset includes the excel file with the normalized data for each gene studied, which includes 20 genes (15 candidates to validate and 5 houskeeping genes) and 14 internal controls from the manufacturer and one excel file with the metadata of each of the 285 patients.
DOI: 10.6084/m9.figshare.24116424.v1
title: Baidu Migration Big Data

description: Baidu Migration Big Data provides indices of migration scale (including an in-migration scale index and an out-migration scale index) recorded in days for 369 cities(4 municipalities directly under the central government, 2 special administrative regions, 293 prefecture-level cities, 7 prefectures, 30 autonomous prefectures, 3 leagues, 29 county-level administrative units directly managed by the province, and Taiwan Province) in China and the percentage of in-migration from a particular city to the total in-migration from that city for each city's in-migration sources. The migration scale index reflects the size of a city's in-migration or out-migration populations and allows for cross-city comparisons. PM_ij is the index of spatial connection of population migration between city i and city j.
DOI: 10.6084/m9.figshare.28434071.v2
title: Data for HONO emissions from rice paddies

description: Flux measurements of HONO emissions from rice paddies in Shanghai
DOI: 10.6084/m9.figshare.7019777.v5
title: When Are Loss Frames More Effective in Climate Change Communication? An Application of Fear Appeal Theory

description: This study investigated how goal frames (gain, non-loss, loss) either with or without efficacy statements affect consumers’ support for climate-change policy. Addressing the goal-framing literature’s difficulty in establishing a guiding theory with consistent findings, we (1) propose fear appeal theory as an alternative framework to guide goal-framing research; (2) test five fear appeal variables (fear, perceived threat, hope, perceived efficacy, and message processing) as mediators of goal-framing effects on policy support; and (3) highlight four common goal-framing confounds that may partly underlie the literature’s inconsistent findings. Aligning with fear appeal theory, results from a carefully controlled experiment revealed that a more threatening loss frame paired with an efficacy statement produced the strongest pro-policy attitudes and the greatest willingness-to-pay by successfully balancing fear/threat with hope/efficacy and by producing deeper message processing.
DOI: 10.6084/m9.figshare.12533162.v1
title: Table S2: Transcriptome-wide expression profiling of Sporothrix schenckii yeast and mycelial forms

description: List of genes expressed in yeast and mold forms of <i>S. schenckii</i>
DOI: 10.6084/m9.figshare.19939241.v1
title: Saturated hydraulic conductivity (Ks) .xlsx

description: The current study was conducted in the ShaYanGou watershed (37°54′28′′N to 37°55′02′′N, 110°08′59′′E to 110°09′39′′E) located in Mizhi County, Shaanxi Province, China. The spatial pattern and heterogeneity of Ks on the hillslope was investigated using the method of extensive sampling.
DOI: 10.17632/kn59bpg6j6
title: Results of thermal imaging survey of enclosing structures within housing construction objects located in the city of St. Petersburg

description: Dataset contains thermogram files obtained during a thermal imaging survey performed with the use of measuring equipment "Fluke TiR" in relation to enclosing structures in residential construction projects located in the city of St. Petersburg.. Thermogram files are located in separate directories, corresponding to specific variants of the enclosing structure: directory "w_1" - tiled facade on reinforced concrete base; directory "w_2" - ventilated facade on reinforced concrete base; directory "w_3" - plaster facade on reinforced concrete base; directory "w_4" - tiled facade on brick base; directory "w_6" - plaster facade on brick base. Each file also contains a rectangular temperature marker created in the program "Fluke SmartView 4.3" to measure the temperature for a specific fragment of the enclosing structure's outer surface.
DOI: 10.25403/upresearchdata.13142792.v1
title: Real time in-situ RBS results of Sr implanted in glassy carbon

description: The file contains all the data acquired from the investigation of the diffusion behaviour of Sr implanted in glassy carbon using real-time in-situ RBS measurements.
DOI: 10.17632/ftmp4cvtmb
title: Histopathological imaging database for Oral Cancer analysis 

description: Total 1224 images are there in this repository. Images are divided into two sets in two different resolutions. First set composed of 89 histopathological images with the normal epithelium of the oral cavity and 439 images of Oral Squamous Cell Carcinoma (OSCC) in 100x magnification. The second set consists of 201 images with the normal epithelium of the oral cavity and 495 histopathological images of OSCC in 400x magnifications. The images were captured using a Leica ICC50 HD microscope from H&E stained tissue slides collected, prepared and catalogued by medical experts from 230 patients.
DOI: 10.6084/m9.figshare.22014422.v1
title: Absorbance of infrared fluorescent proteins

description: Absorbance of infrared fluorescent proteins
DOI: 10.6084/m9.figshare.25983526.v1
title: MERSCOPE human lung cancer (clustered)

description: Processed dataset from Vizgen MERSCOPE spatial transcriptomics measurement of 2 sections from 2 lung cancer patients. Cells are clustered based on their cellular niches (also known as spatial domains or spatial clusters) using CellCharter.Additionally, we share the scANVI model used for batch effect removal, dimensionality reduction and cell type estimation.
DOI: 10.6084/m9.figshare.26983645.v2
title: The CeTI-Age-Kinematics dataset: A Full-Body IMU-Based Motion Dataset of Daily Tasks by Older and Younger Adults

description: The <i>CeTI-Age-Kinematics</i> dataset provides <b>full-body movements from 30 common daily tasks in nine categories</b>, e.g., targeted reaching, lifting and walking tasks, and of multiple object interactions. Kinematic data were recorded at Dresden University of Technology (Germany) with informed consent of the participants under well-controlled conditions, covering multiple motion repetitions and task variations. The tasks were performed by <b>32 participants</b> covering a wider age range, including <b>older adults (66-75 years)</b> and <b>younger adults (19-28 years)</b>. Data were recorded using <b>sensor suits and gloves with inertial measurement units</b> (Rokoko Electronics, Denmark), with utilizing 33 sensors in total for full-body, wrist, and finger movements. The dataset also entails <b>anthropometric body measurements</b> and further <b>demographic data</b>. Additionally, the dataset provides <b>spatial measurements of the experimental setups</b> to enhance the interpretation of the kinematic data in relation to body characteristics and situational surroundings.The data records are structured according to the <b>Motion-BIDS</b> standard, with (i) meta-files describing the participants' characteristics such as demographic, anthropomorphic, and other data (see participant[.json|.tsv] files); (ii) metadata and additional information on the dataset (see dataset_description.json, README.md); (iii) TSV and BVH data that contain the kinematic motion data for each movement task, along with metadata on the task descriptions and instructions, (iv) source code to process and visualize the data, (v) materials that document the acquisition process such as recording protocols and exemplary videos of the motion executions.Detailed information, visualizations of the dataset content, and explanations of algorithmic approaches are available in the linked supplements, such as in the data descriptor and supplementary information accessible here: <i>Pogrzeba, L., Muschter, E., Hanisch, S. et al. (2025). A Full-Body IMU-Based Motion Dataset of Daily Tasks by Older and Younger Adults. Scientific Data, 12, 531. </i><i>https://doi.org/10.1038/s41597-025-04818-y</i><i> </i>
DOI: 10.6084/m9.figshare.9033983.v1
title: EEG recordings and stimuli

description: Sample data to run example code generating temporal response function to word-level features in the delta band.<br>The dataset contains EEG recordings, preprocessed (band-pass filtered, rereferenced to average, and resampled at 125Hz) for all participants, as well as corresponding stimulus material.<br>The software and code can be found at:Weissbart, Hugo (2019): Example code for linguistic TRFs in delta band. figshare. Software.https://doi.org/10.6084/m9.figshare.9034481
DOI: 10.17632/7chdr568x7
title: Egyptian Stock Exchange (EGX)

description: Houssein, Essam H., Mahmoud Dirar, Kashif Hussain, and Waleed M. Mohamed. "Assess deep learning models for Egyptian exchange prediction using nonlinear artificial neural networks." Neural Computing and Applications 33, no. 11 (2021): 5965-5987.
DOI: 10.6084/m9.figshare.22309114.v1
title: crAssphage across healthy gut metagenomes

description: The anvi'o contigs-db and profile-db files in this folder represent the metagenomic read recruitment results from 4,515 global gut metagenomes from healthy individuals using the crAssphage genome.
DOI: 10.6084/m9.figshare.5285521.v3
title: Gridded bathymetry of the Baker-Martinez fjord complex (Chile, 48°S) v1

description: <b>UPDATE:</b> <b>version 2 of the bathymetric map is available at Marine Geoscience Data System</b> <br>(www.marine-geo.org/tools/search/entry.php?id=ChileanFjords_Piret)<br><br>We present a bathymetric map of the Baker-Martinez fjord complex (Chile, 48⁰S) constructed from multiple data sets: multibeam echosounder data of Baker channel (Harada et al., 2008) and of Steffen fjord and Baker river delta (Vandekerkhove & Bertrand, 2016), single beam echosounder data of Jorge Montt fjord (Rivera et al., 2012, Moffat, 2014 and additional data from C. Moffat) and individual bathymetry points from two SHOA nautical charts (SHOA, 2001, 2008). The heterogeneous data with distinct spatial resolution was gridded using the kriging method (3.6 arc-second resolution) in Surfer from Golden Software. We intend to update this map when new datasets become available. The deepest basin of Baker channel (73.8°W) reaches depths of 1075 m below sea level (BSL). To the west, the channel has depths ranging from 450 to 750 m BSL. Martinez channel is between 200 and 440 m deep in its eastern part and reaches depths of 535 m BSL to the west. The bullseye effect in Martinez channel is a mere artefact of the gridding procedure as there is only sparse bathymetric data available in that area. The deepest and largest basin (1405 m BSL and approx. 10 km wide) is located in Messier channel. All the channels are flanked by steep slopes (20 – 40°). Transverse ridges are present throughout the fjord complex, creating separated sub-basins (e.g. north of the deepest basin in Messier channel, in the center of Baker channel at 74.35°W). The fjord becomes shallower (200 – 300m BSL) towards its mouth in the Gulf of Penas. This bathymetric map is intended for regional oceanographic and geological research projects. <b>References:</b> Harada, N. and the shipboard scientific party, 2008. MIRAI cruise report MR06-04 Leg 3, Japan Agency for Marine Earth Science and Technology, Yokosuka, 176 pp. Moffat, C., 2014. Wind-driven modulation of warm water supply to a proglacial fjord, Jorge Montt Glacier, Patagonia. Geophysical Research Letters, <i>41</i>, 1–8. Rivera, A., Koppes, M.N., Bravo, C., Aravena, J.C., 2012. Little Ice Age advance and retreat of Glaciar Jorge Montt, Chilean Patagonia. Climate of the Past, 8, 403–414. SHOA (Servicio Hidrográfico y Oceanográfico de la Armada de Chile), 2001. "Canal Baker y Puertos Adyacentes (Canal Baker)", 6<sup>th</sup> ed., sheet 9100, 1:200 000, Mercator projection. SHOA (Servicio Hidrográfico y Oceanográfico de la Armada de Chile), 2008. “Acceso Norte a Canal Messier – Boca de Canales a Isla Van Der Meulen”, 2nd ed., sheet 9300, 1:100 000, Mercator projection. Vandekerkhove, E., Bertrand, S., 2016. Expedition report Paleo-GLOFs and HYDROPROX, 13 pp.
DOI: 10.6084/m9.figshare.16929766.v1
title: Conjugate Natural Convection Heat Transfer

description: These data sets and plots present the variation of fluid flow and heat transfer in the case of conjugate natural convection in vertical eccentric annular channel.