cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5106662
title: Full data for 'Signatures of Majorana fermions in hybrid superconductor-semiconductor nanowire devices' Science 336, 1003-1007 (2012)

description: This Zenodo record contains full original data pertaining to V. Mourik, K. Zuo, S.M. Frolov, S.R. Plissard, E.P.A.M. Bakkers and L.P. Kouwenhoven Signatures of Majorana fermions in hybrid superconductor-semiconductor nanowire devices Science 336, 1003-1007 (2012) <br> --------------------------------------------- Author contributions to this repository: Data were obtained between November 2011 and March 2012 by KZ, VM and SF. The files in the repository were organized by SF. LK supports making data files available but has not contributed and has not checked the quality of the files in this data repository. --------------------------------------------- Original data obtained at the time of measurement are in the \Data folder. The folder also contains data selected for the paper. The repository also includes measurement logs (\Logs), and some plotting scripts (\Scipts) Folder \Analyses contains powerpoint files made at the time of measurement helpful for data overview --------------------------------------------- Devices studied: N-nanowire-S device 1 (chip name 6F2 device 3 in this repository)<br> Device measured in the dilution refrigerator 'Oxford 200s', at the same time as device 3 N-nanowire-S device 2 (chip name 6F4)<br> Device measured in the dilution refrigerator Frossati MCK-50 'Fristi', equipped with a 9-3-1 T vector magnet) M-nanowire-S device 3 (chip name 6F2 device 1 in this repository)<br> Device measured in the dilution refrigerator 'Oxford 200s', at the same time as device 1 N-N devices (Chip name 6F8)<br> Devices measured in Frossati MNK fridge 'Big Frossati' S-S devices (Chip name 6E5)<br> Devices measured in the dilution refrigerator 'Oxford 200s' --------------------------------------------- <br> Data for devcies are obatined using QTLab: https://github.com/heeres/qtlab Most data for device2 are obtained using Igor Pro: https://www.wavemetrics.com/ <br> ---------------------------------------------<br> Data file types: data_NNN.dat - the original data file obtained at the time of the experiment<br> dataNNN.py - the original QTLab data acquisition script saved with data<br> data_NNN.set - settings of measurement instruments at the time of measurement<br> data_NNN.meta - auxillary file necessary for plotting data using SpyView (see below) <br> NNN stands for dataset number, automatically indexex by QTLab -------------------------------------------- How to plot data: 1) Spyview - a free data plotting program written by Gary Steele Data in this repository can be simply dropped into Spyview for plotting. Spyview also produces and can read .mtx files which are available for some of the data in this repository. https://nsweb.tn.tudelft.nl/~gsteele/spyview/ <br> 2) QTPlot - a Python plotter written by Ruben van Gulik Data in this repository can be directly opened with QTPlot, which will read axis labels. https://github.com/Rubenknex/qtplot Note: requires PyQT4
DOI: 10.15142/t3736t
title: Replication data for “Can you take the heat?" Heat-health symptoms are associated with protective behaviors

description: This dataset contains survey data of the U.S. adult population that includes self-reported heat-health symptoms, protective behaviors implemented during heat waves, and perceptions of how a heat wave would affect personal health and the health of others. Temperature estimates of what participants may have experienced the summer prior to the survey are included at the county level. Demographic variables and spatial scales by region, state, and county are also included.
DOI: 10.15142/t3xm19
title: Thirteen years of vegetation chronosequence data in ex-arable and undisturbed fields near Winthrop, Washington, USA

description: Non-native plants have invaded much of the western United States over the past 100 years. Most of these invasive species are early-successional, yet they appear to persist for decades. The goal of this research was to describe non-native and native plant abundance in ex-arable and adjacent undisturbed fields over time.
DOI: 10.5281/zenodo.5122518
title: Radar-based mesocyclone detections in Switzerland from 2016-2020

description: The data is owned by MeteoSwiss and the Laboratoire de Télédétection Environnementale, EPFL. It is linked to the research article: Feldmann et al., 2021, A Characterisation of Alpine Mesocyclone Occurrence, submitted to Weather and Climate Dynamics. Whenever using the dataset, please include a reference to this article. This dataset contains thunderstorm track data of thunderstorms containing a radar-detected mesocyclone in Switzerland from 2016-2020. Tracked variables include time, position, size, terrain altitude, track direction, track distance, rotational velocity, vorticity and depth of rotation, amongst others. The README.txt file contains a comprehensive list of all included variables and their units. The data is provided as a .csv file. The methods used to obtain this data are described in the corresponding publication (Feldmann et al., 2021).
DOI: 10.6073/pasta/6ccb0ae5ac1004ff72f1174807a75f40
title: Inorganic Nitrogen Pools and Tree Composition in Hemlock Removal Experiment at Harvard Forest 2007-2009

description: This study assessed how the change in leaf litter input and environmental conditions, from that of hemlock stands to earlier successional deciduous stands, will affect inorganic nitrogen availability at the interface of the mineral soil and LFH horizons. In early October 2007 we exchanged 0.5 x 0.5 m "loaves" of LFH horizons from hemlock and deciduous stands between forest types, while keeping control plots in the original forest stands. Inorganic nitrogen outputs from the litter loaves were monitored for 20 months using ion-exchange resins, removing and replacing the resins three times at 5 - 8 month intervals. Results indicated that there were differences between the control hemlock and deciduous loaves - NO3 and NH4 availability were higher in deciduous stands. However, the transfer of litter loaves from one stand type to another did not reveal changes in nutrient availability due to a shift in habitat. Rather, the methodology of moving litter loaves to a new site caused greater changes in nutrient availability, particularly over the summer months.
DOI: 10.6073/pasta/37e344a61abcc12e05e368216f448ff0
title: Bayesian Analysis of Tree Distributions Across Space and Time in Eastern North America 2010-2011

description: The distributions of many organisms are spatially autocorrelated, but it is unclear whether including spatial terms in species distribution models (SDMs) improves projections of future species distributions. We provide the first comparative test of a purely spatial SDM, a purely non-spatial SDM, and an SDM that combines spatial and environmental information. Spatial SDMs provided better fits to the calibration data, more accurate predictions of a hold-out validation data set of modern trees, and lower false positive rates at all time periods than non-spatial SDMs. Hindcasted projection of spatial SDMs had higher variance than those of non-spatial SDMs. Overall predictive performance of non-spatial and spatial SDMs varied temporally and as a function of niche overlap. Ecological modelers should include spatial terms in SDMs used for projecting future distributions of species.
DOI: 10.5519/qd.5tt8hxhh
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (25 records)
DOI: 10.6073/pasta/7c9d22c7d26f61d37386b90df058483a
title: Modeling Range Expansion of Hemlock Woolly Adelgid in Eastern North America 1951-2009

description: Range expansion by native and exotic species will continue to be a major component of global change. Anticipating the potential effects of changes in species distributions requires models capable of forecasting population spread across realistic, heterogeneous landscapes and subject to spatiotemporal variability in habitat suitability. Several decades of theory and model development, as well as increased computing power and availability of fine-resolution GIS data, now make such models possible. This R code allows simulation of the spread of the hemlock woolly adelgid (HWA, Adelges tsugae) under climatic conditions experienced from December of 1951 until March of 2009. The code describes a spatially explicit stochastic model that combines dynamic dispersal and population processes with fine-resolution maps characterizing spatiotemporal heterogeneity in winter temperature and hemlock abundance to model range expansion of HWA. The model is parameterized using multi-year datasets describing population and dispersal dynamics of HWA and is applied to eastern North America.
DOI: 10.6073/pasta/5a9a8171db960c09d64e46c278cf8a33
title: Annual Maps of Mean Winter Temperature for Eastern North America 1951-2009

description: We developed annual raster maps depicting spatiotemporal variation in mean winter temperature for the purposes of modeling the spread of the hemlock woolly adelgid. The maps are based on the PRISM and WorldClim datasets as described in methods.
DOI: 10.26078/33qd-y974
title: Data from Analysis of Mesosphere Secular Trends and Episodic Variability, 9/3/1993 to 8/5/2003

description: The database examined here covers a time span from September 1993 to August 2003 and an altitude range of 45 to 90 km, and contains 593 nightly temperature profiles. We examine our data for secular warming and cooling and decadal scale (solar cycle) variations by applying three different models to the data.
DOI: 10.5281/zenodo.5148823
title: ApiNATOMY SciGraph snapshot 2021-07-30

description: This is an archive of the ApiNATOMY connectivity subset of the SPARC knowledge base loaded as a Neo4j database for use in SciGraph. For more information about the SPARC knowledge base see https://sparc.science/help/knowledge-management-and-curation-core-k-core-information. This work was funded by NIH award 1OT2OD030541-01.
description: SciGraph releases are only expected to work with the version of SciGraph they were build against. They may work with other versions, but this would be by accident rather than by intention. For the record, this release is known to work against https://github.com/SciGraph/SciGraph/commit/38d02f1eb1abb15b7c9dfc5ca920ededadcabf7e.
DOI: 10.5281/zenodo.4538727
title: ApiNATOMY SciGraph snapshot 2021-07-30

description: This is an archive of the ApiNATOMY connectivity subset of the SPARC knowledge base loaded as a Neo4j database for use in SciGraph. For more information about the SPARC knowledge base see https://sparc.science/help/knowledge-management-and-curation-core-k-core-information. This work was funded by NIH award 1OT2OD030541-01.
description: SciGraph releases are only expected to work with the version of SciGraph they were build against. They may work with other versions, but this would be by accident rather than by intention. For the record, this release is known to work against https://github.com/SciGraph/SciGraph/commit/38d02f1eb1abb15b7c9dfc5ca920ededadcabf7e.
DOI: 10.6073/pasta/b7ab734fdf47b6674bb33e059335e8bb
title: Food Web of Sarracenia Purpurea in United States and Canada 1999-2011

description: How food webs are structured and how their structure and dynamics vary through time and space is a central focus of research in community ecology. We documented structural variation in the aquatic food web inhabiting pitcher-shaped leaves of the carnivorous pitcher plant Sarracenia purpurea across the geographic range of the plant (from Florida north to Labrador and west to British Columbia); examined temporal variation in this food web with detailed experiments in Massachusetts and Vermont; experimentally manipulated top-down and bottom-up processes in this food web in Massachusetts; and developed a dynamic simulation model of this food web that incorporates metacommunity dynamics.
DOI: 10.5281/zenodo.5148825
title: PredLnc-GFStack - Models

description: PredLnc-GFStack - Models
DOI: 10.5281/zenodo.5148824
title: PredLnc-GFStack - Models

description: PredLnc-GFStack - Models
DOI: 10.6073/pasta/84ba29dfcd7d2b2f32326489279f0fe9
title: 20-Year Synthesis of Soil Respiration Data at Harvard Forest 1991-2008

description: All data on soil carbon flux (“soil respiration”) collected using chamber-based methods at Harvard Forest from a range of observational and experimental plots were collated, their units were harmonized, and geographic (locations) and environmental characteristics (soil series, drainage class, soil temperature, soil moisture, vegetation type, etc.) were identified for each observation. This yielded a dataset with 106,192 observations of soil respiration taken between 1991 and 2008. These data provide a unique resource for exploring spatial and temporal patterns in soil respiration in a range of common New England forest types. For the Giasson, et al. (2013) publication, we also used 24 site-years of eddy covariance measurements from two Harvard Forest sites (EMS and Hemlock towers) to examine the relationship between soil and ecosystem respiration. Here, we present all derived/synthetic datasets associated with the manuscript. M.-A. Giasson, A. M. Ellison, R. D. Bowden, P. M. Crill, E. A. Davidson, J. E. Drake, S. D. Frey, J. L. Hadley, M. Lavine, J. M. Melillo, J. W. Munger, K. J. Nadelhoffer, L. Nicoll, S. V. Ollinger, K. E. Savage, P. A. Steudler, J. Tang, R. K. Varner, S. C. Wofsy, D. R. Foster, and A. C. Finzi 2013. Soil respiration in a northeastern US temperate forest: a 22-year synthesis. Ecosphere 4:art140. http://dx.doi.org/10.1890/ES13.00183.1
DOI: 10.6073/pasta/0f40a67a52c260cd9baf5b394c749d62
title: History and Dynamics of American Beech in Coastal New England 1620-2006

description: Variation in forest response to hurricane disturbance in coastal New England Research on disturbance in forest ecosystems has generally focused on either catastrophic disturbances generating stand-replacing successional sequences, or small-scale disturbances (e.g. individual tree-fall gaps) resulting in tree-by-tree replacement. The role of moderate disturbances in forest development, in contrast, is poorly understood. While the most severe hurricanes can cause catastrophic disturbance, the vast majority of hurricanes that affect forests from the Caribbean to the northeastern United States are moderate in intensity. In this study we examine both individual and population level responses of beech (Fagus grandifolia) and oak species (Quercus spp.) to hurricanes of varying intensity in coastal Massachusetts. We characterize growth response to disturbance using a novel approach that explicitly compares the range of growth responses observed following known disturbances to the range of growth responses in non-event years. The tree species exhibited a wide range of growth and regeneration responses to hurricanes; however, only a single storm caused dramatic increases in growth and new establishment for beech. The results of this study highlight the importance of wind disturbance in the establishment and persistence of beech, and suggest that while some moderate disturbances have little or no effect on species growth and regeneration dynamics, individual storms may have substantial impacts. Forest response to wind storms of varying, but moderate intensities, depended on local site conditions, including environmental, meteorological, topographical, historical and biological factors. Beech dominance in a coastal New England forest Monodominant forests occur in a wide range of tropical and temperate ecosystems, but the mechanisms enabling their development are not well understood. This study examines the history and dynamics of beech-dominated forests in coastal New England in order to identify factors that facilitate beech dominance. We also characterize beech structural variation with respect to edaphic and environmental conditions, and describe ‘dwarf beech forests’ which have not been documented in the literature. The development of beech dominance in the study area, Naushon Island, Massachusetts, was influenced by numerous factors - selective oak harvesting in the early historical period, infrequent fire, frequent and occasionally intense hurricanes, intense deer herbivory, minimal anthropogenic disturbance over the past 150 years, and geographic isolation – and facilitated by beech’s ability to persist in the understory and reproduce vegetatively. This study highlights the importance of both disturbance history and species-specific traits in the development of monodominant forests, and suggests that these stands can persist for long periods of time in the absence of pest, pathogen, or other disturbances.
DOI: 10.6073/pasta/0f02419549cd1c272a596c554e243fb6
title: Impacts of Land Use on Japanese Barberry Invasion in Central Massachusetts 2005

description: Despite the recognized importance of historical factors in controlling many native species distributions, few studies have incorporated historical landscape changes into models of invasive species distribution and abundance. We explore the possibility that the current distribution of invasive species may reflect legacies of historical land use despite nearly a century of forest succession and subsequent disturbances. We evaluated the modern distribution and abundance of Berberis thunbergii DC. (Japanese barberry), a problematic non-native shrub in forests of the northeastern U.S., relative to two distinct periods of historical land use, modern forest harvesting activity, and environmental and edaphic characteristics. Species questions addressed in this study include: (1) Do patterns of historical land use influence modern barberry distribution and abundance? (2) What is the influence of disturbance type and timing relative to the timing of introduction on current barberry distribution and abundance? (3) Which disturbance, environmental and edaphic variables best predict modern barberry distribution and abundance? Japanese barberry occurred more frequently and was more abundant in sites historically cleared for agriculture than in historically wooded sites. This relationship was strongest for areas in agriculture in the early 20th century after barberry was introduced to the region. The strong relationship between modern distribution patterns and prior land use suggests historical colonization of abandoned agricultural lands and persistence through subsequent reforestation. Contrary to our expectations, recent forest harvesting did not influence the occurrence or abundance of barberry. Our results indicate that interpretations of both native community composition and modern plant invasions must consider the importance of historical landscape changes and the timing of species introduction along with current environmental and edaphic conditions.
DOI: 10.3886/e146302
title: Critical Data Practices in a MultiPandemic

description: This study investigates how youth from two cities in the US engage in critical data practices as they learn about and take action on COVID-19. Since March 2020, we have co-documented, with youth in the Midwest and the West Coast of the US, how people learn and make decisions in relation to COVID-19 in real time, and how this is shaped by justice-related concerns. Guided by theories of critical data literacies and data justice, a historicized and future-oriented participatory methodological approach is used to center the lived lives and communities of participants through dialogic interviews and experience sampling. Data were co-analyzed with participants using critical grounded theory. Findings illustrate how youth not only aimed to reveal the dynamic and human aspects of and relationships with data as they engage with/in the world as people who matter, but also offered alternative infrastructures for counter data production and aggregation towards justice in the here-and-now and possible futures. Implications for studies of learning with/through data practices in everyday life in relation to issues of justice are discussed.<br><br>
description: The larger study involves 60 participants across two metropolitan areas representing different geographic regions of the US, including 19 youth (29 BIPoC; 4 White) in Great Lakes City and 13 youth (6 BIPoC; 3 White; 2 Asian and 2 Caucasian/Middle Eastern) in West Coast City. This study examines data generated March - July 2020 with youth ages 12-24 (N=32), during the initial waves of the pandemic in the US. We used snowball sampling methods drawing from multi-year relationships grounded in our longterm community center partnerships in two geographic regions.<br><br>
description: West Coast City (13 youth, ages 12-24): 6 BIPoC; 3 White; 2 Asian; 2 Middle Eastern<br><br>Great Lakes City (19 youth, ages 12-24): 13 Black/Biracial; 2 Indigenous/Native American; 4 White<br>. Smallest Geographic Unit: USA
description: computer-assisted personal interview (CAPI); mixed mode; other; web-based survey; Using a historicized and future-oriented participatory methodological approach, we seek to give witness to and learn with youth and community (Villenas, 2019). This requires centering participant voices as opposed to researcher voice, placing importance on methods such as open-ended interviews with co-determined protocols and co-analyzed findings.<br>
DOI: 10.3886/e146302v1
title: Critical Data Practices in a MultiPandemic

description: This study investigates how youth from two cities in the US engage in critical data practices as they learn about and take action on COVID-19. Since March 2020, we have co-documented, with youth in the Midwest and the West Coast of the US, how people learn and make decisions in relation to COVID-19 in real time, and how this is shaped by justice-related concerns. Guided by theories of critical data literacies and data justice, a historicized and future-oriented participatory methodological approach is used to center the lived lives and communities of participants through dialogic interviews and experience sampling. Data were co-analyzed with participants using critical grounded theory. Findings illustrate how youth not only aimed to reveal the dynamic and human aspects of and relationships with data as they engage with/in the world as people who matter, but also offered alternative infrastructures for counter data production and aggregation towards justice in the here-and-now and possible futures. Implications for studies of learning with/through data practices in everyday life in relation to issues of justice are discussed.<br><br>
description: The larger study involves 60 participants across two metropolitan areas representing different geographic regions of the US, including 19 youth (29 BIPoC; 4 White) in Great Lakes City and 13 youth (6 BIPoC; 3 White; 2 Asian and 2 Caucasian/Middle Eastern) in West Coast City. This study examines data generated March - July 2020 with youth ages 12-24 (N=32), during the initial waves of the pandemic in the US. We used snowball sampling methods drawing from multi-year relationships grounded in our longterm community center partnerships in two geographic regions.<br><br>
description: West Coast City (13 youth, ages 12-24): 6 BIPoC; 3 White; 2 Asian; 2 Middle Eastern<br><br>Great Lakes City (19 youth, ages 12-24): 13 Black/Biracial; 2 Indigenous/Native American; 4 White<br>. Smallest Geographic Unit: USA
description: computer-assisted personal interview (CAPI); mixed mode; other; web-based survey; Using a historicized and future-oriented participatory methodological approach, we seek to give witness to and learn with youth and community (Villenas, 2019). This requires centering participant voices as opposed to researcher voice, placing importance on methods such as open-ended interviews with co-determined protocols and co-analyzed findings.<br>
DOI: 10.5281/zenodo.5148858
title: ezLncPred: PredLnc-GFStack - Models

description: PredLnc-GFStack - Models
DOI: 10.6084/m9.figshare.15085068
title: Raw data.xlsx

description: Raw Dataset for University Instructors' Technostress and Online Teaching Self-Efficacy Project