cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/95mmjfrsyh.2
title: Credal Dog-2

description: Most datasets used for classification use hard labels. Credal Dog-2 was labeled uncertainly and imprecisely by contributors during crowdsourcing campaigns. Resulting in richer labels, modeled with the theory of belief funtions, which generalizes several reasoning frameworks with uncertainty. These datasets can be used with classical models using hard labels but also with probabilistic, fuzzy or even evidential models.

Dataset:
2 classes, 200 observations, 42 features (or raw pictures)

When using the dataset please cite :
A. Hoarau, C. Thierry, A. Martin, J.-C. Dubois, Y. Le Gall, "Datasets with rich labels for machine learning", in: FUZZ-IEEE, 2023.

Credal Dog-2 dataset
├── data
│ ├── classes.csv: Classes of the dataset
│ ├── X.csv: Features of the dataset
│ ├── X_512.csv: Learge 512 features vector of the dataset
│ ├── X_pictures.csv: Raw features (Pictures themselves)
│ ├── y.csv: Rich labels
│ └── y_true.csv: True labels
└── extra
 ├── y_hard.csv: Hard labels given during a new campaign
 ├── DATA_imperfect.csv: Imperfect answers given during the campaign
 ├── ITERATION_imperfect.csv: Imperfect 2nd step answers given during the campaign
 ├── EVENT_imperfect.csv: Contributors events
 ├── ID_imperfect.csv: Contributors IDs
 └── DATA_perfect.csv: Precise answers given during a new campaign

Credal Dog-7:
https://data.mendeley.com/datasets/4hz3wx6wm5
Credal Dog-4:
https://data.mendeley.com/datasets/44zpkbrpxb
Credal Bird-10:
https://data.mendeley.com/datasets/9sz5vm8g7h
Credal Bird-2:
https://data.mendeley.com/datasets/v8k6c5s9cy
DOI: 10.17632/8kjcztbjz2.2
title: ImageWeeds: An Image dataset consisting of weeds in multiple formats to advance computer vision algorithms for real-time weed identification and spot spraying application

description: Dataset consists of aerial and greenhouse images in multiple formats to advance computer vision algorithms for site-specific spraying applications.
DOI: 10.17632/pbj4nx55jt.1
title: Membrane mediated TREK mechanosensation

description: Data are from Petersen et al to be published in elife. Data include pair correlations and cluster data from dSTORM of Twik Related potassium channel (TREK) relative to the lipids GM1 and PIP2. Condition include 3 dyns/cm2 shear and osmotic shock. Electrophysiology data of TREK with catalytically inactive phospholipase D2 (PLD2) from mouse over expressed in HEK293T. PLD activity assay with shear in insect cells.
DOI: 10.17632/pbj4nx55jt.2
title: Membrane mediated TREK mechanosensation

description: Data are from Petersen et al to be published in elife. Data include pair correlations and cluster data from dSTORM of Twik Related potassium channel (TREK) relative to the lipids GM1 and PIP2. Condition include 3 dyns/cm2 shear and osmotic shock. Electrophysiology data of TREK with catalytically inactive phospholipase D2 (PLD2) from mouse over expressed in HEK293T. PLD activity assay with shear in insect cells.
DOI: 10.17632/9sz5vm8g7h.2
title: Credal Bird-10

description: Most datasets used for classification use hard labels. Credal Bird-10 was labeled uncertainly and imprecisely by contributors during crowdsourcing campaigns. Resulting in richer labels, modeled with the theory of belief funtions, which generalizes several reasoning frameworks with uncertainty. These datasets can be used with classical models using hard labels but also with probabilistic, fuzzy or even evidential models.

Dataset:
10 classes, 200 observations, 30 features (or raw pictures)

When using the dataset please cite :
A. Hoarau, C. Thierry, A. Martin, J.-C. Dubois, Y. Le Gall, "Datasets with rich labels for machine learning", in: FUZZ-IEEE, 2023.

Credal Bird-10 dataset
├── data
│ ├── classes.csv: Classes of the dataset
│ ├── X.csv: Features of the dataset
│ ├── X_512.csv: Learge 512 features vector of the dataset
│ ├── X_pictures.csv: Raw features (Pictures themselves)
│ ├── y.csv: Rich labels
│ └── y_true.csv: True labels
└── extra
 ├── y_hard.csv: Hard labels given during a new campaign
 ├── DATA_imperfect.csv: Imperfect answers given during the campaign
 ├── ITERATION_imperfect.csv: Imperfect 2nd step answers given during the campaign
 ├── EVENT_imperfect.csv: Contributors events
 ├── ID_imperfect.csv: Contributors IDs
 └── DATA_perfect.csv: Precise answers given during a new campaign

Credal Dog-7:
https://data.mendeley.com/datasets/4hz3wx6wm5
Credal Dog-4:
https://data.mendeley.com/datasets/44zpkbrpxb
Credal Dog-2:
https://data.mendeley.com/datasets/95mmjfrsyh
Credal Bird-2:
https://data.mendeley.com/datasets/v8k6c5s9cy
DOI: 10.17632/jtn5ndky7x.4
title: Petrology, Geochronology and Geochemistry of the Xingshuwa ophiolite mélange in Southeastern Inner Mongolia: Implications for the Suture Zone between the Siberian and North China Paleoplates in the Southeastern Central Asian Orogenic Belt

description: Supporting data for "Petrology, Geochronology and Geochemistry of the Xingshuwa ophiolite mélange in Southeastern Inner Mongolia: Implications for the Suture Zone between the Siberian and North China Paleoplates in the Southeastern Central Asian Orogenic Belt"

Table S1. Zircon U–Pb data of the metagabbro (P4B4-5), tuffaceous sandstones (TD221-1 and TD221-3) and foliated argillaceous siltstone (20LX101-2, 20LX106-1) in the Xingshuwa ophiolite mélange
Table S2. Major and trace elements of the mafic and ultramafic rocks in the Xingshuwa ophiolite mélange
Table S3. Major and trace elements of the chert blocks in the Xingshuwa ophiolite mélange
Table S4. Sr-Nd Isotope data for mafic rocks in the Xingshuwa ophiolite mélange
DOI: 10.17632/p7rsc48hpt.1
title: Metabolomics of scorpionate-exposed cells - part 3

description: Full untargeted metabolomics raw data (Bruker Impact II QqTOF) from B16, HaCaT and HCT116 cells exposed to FeCl2Tpm (1) or CoTpm2(OH)2 (2) scorpionate complexes. Manuscript in press.
DOI: 10.17632/254vj2jgkc.1
title: Metabolomics of scorpionate-exposed cells - part 2

description: Full untargeted metabolomics raw data (Bruker Impact II QqTOF) from B16, HaCaT and HCT116 cells exposed to FeCl2Tpm (1) or CoTpm2(OH)2 (2) scorpionate complexes. Manuscript in press.
DOI: 10.17632/z2nb649hbz.1
title: Metabolomics of scorpionate-exposed cells - part 1

description: Full untargeted metabolomics raw data (Bruker Impact II QqTOF) from B16, HaCaT and HCT116 cells exposed to FeCl2Tpm (1) or CoTpm2(OH)2 (2) scorpionate complexes. Manuscript in press.
DOI: 10.17632/wbrxbydwds.1
title: A 14,000-year sediment record of mercury accumulation and isotopic signatures from Lake Malaya Chabyda (Siberia)

description: The frozen soils in Eurasia contain a lot of organic carbon and mercury. As the climate gets warmer and the soil thaws, carbon and mercury might be released into the air and water. To understand these dynamics, a study was conducted on sediment archives from a lake in Russia that go back 14,000 years. 

The study found that the amount of mercury in the sediment was connected to organic carbon. During a very cold period called the Younger Dryas, when the lake level was low, both mercury and carbon in the sediment were low. The lake had poor conditions for life during this time.

As the climate warmed, carbon and mercury inputs increased in the sediment, especially during the early Holocene period. This suggests that more aquatic algae and plant growth traps carbon and mercury. From 4,100 years ago until now, the ratio of mercury to organic carbon kept increasing, indicating more mercury being deposited into the lake. The type of mercury in the sediment changed, showing that more of it was directly taken up by the water. This happened because of more plant growth and better trapping of mercury in the sediment.

The data in this repository includes Age (BP), Hg (ng/g), HgAR (ug/m2/y), d202, D199, D200, and D201.
DOI: 10.17632/zgxdnbmy9n.1
title: Immuno-Kachiks formula immunomodulates and ameliorates hepatic damage induced by monosodium glutamate in rats

description: Background: Immuno-Kachiks® is an herbal formulation made in Uganda that is being used for immunomodulation and the management of hepatic fibrosis.
Aim: To determine the pharmacognostic parameters, safety, and effects of the Immuno-Kachiks® formulation against monosodium glutamate-induced liver fibrosis and adaptive immune suppression in male Wistar rats.
Methodology: Liver fibrosis and immune suppression were induced by orally administering 2000 mg/kg monosodium glutamate to male Wistar rats aged 10 to 12 weeks for three months, followed by 28 days of treatment with the Immuno-Kachiks® product. The treatment doses were 400, 800, and 1500 mg/kg. Curative anti-hepatic fibrosis effects were determined by evaluating levels of alpha fetoproteins, total bilirubin, ALP, AST, the neutrophil-to-lymphocyte ratio, and liver histopathological studies. Immunomodulatory effects were assessed by evaluating the white blood cell count, lymphocyte count, neutrophil count, and mixed cell count. Phytochemical screening, product fingerprinting, and acute toxicity evaluation were also performed.
Results: Saponins, cardiac glycosides, tannins, flavonoids, phenolic compounds, alkaloids, steroids, and terpenoids were present. The Immuno-Kachiks® formulation exhibited 4 similar retention times at each of the three different wavelengths: 230 nm, 254 nm, and 370 nm. The median lethal dose (LD50) of the Immuno-Kachiks® formulation was greater than 5000 mg/kg. Monosodium glutamate significantly reduced the lymphocyte count and increased the neutrophil-to-lymphocyte ratio. The Immuno-Kachiks® formulation significantly increased the lymphocyte count, reduced the neutrophil-to-lymphocyte ratio, and normalised the neutrophil count. Treatment with the Immuno-Kachiks® product significantly reversed the alterations in liver morphology observed in rats with monosodium glutamate-induced liver fibrosis.
Conclusion: The Immuno-Kachiks® formulation is relatively safe, is a potential curative agent for early-stage liver fibrosis and enhances adaptive immunity.
Recommendations: Subacute and chronic toxicity studies, stability studies, and a study on the curative potential of the Immuno-Kachiks® product for liver cirrhosis be done.
DOI: 10.17632/d3nnnd9j9p.1
title: Data for the paper titled "Safety, immunogenicity and lot-to-lot consistency of a Euvichol-S for prevention of Vibrio cholerae O1: a phase 3, observer-blinded, randomized, active-controlled trial in Nepal"

description: This package includes a dataset with a data dictionary for the analysis results that were used to generate tables and figures presented in the paper titled "Safety, immunogenicity and lot-to-lot consistency of a simplified, monovalent, whole cell, inactivated oral cholera vaccine (Euvichol-S) for prevention of Vibrio cholerae O1: a phase 3, observer-blinded, randomized, active-controlled trial in Nepal"
DOI: 10.17632/888s8c459k.1
title: LDHU3_02.0140

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/72b2chbxxs.1
title: LDHU3_02.0170

description: Exportin-T; Leishmania donovani (HU3 strain)
DOI: 10.17632/jdcmgw5dtm.1
title: LDHU3_02.0210

description: Conserved oligomeric Golgi complex subunit 1; Leishmania donovani (HU3 strain)
DOI: 10.17632/5f6fym89zm
title: Anatase and rutile nanoparticles in photopolymer 3D-printed nanocomposites: Band gap-controlled electron interactions in free-radical and cationic photocuring

description: This dataset contains the following processed data: cyclic voltammograms, UV-VIS absorbance spectra, Raman spectra, STEM images, real-time FTIR and conversion data, and Jacobs working curves
DOI: 10.17632/c6kwtt4v49.1
title: LDHU3_02.0200

description: Ankyrin repeat-containing protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/5f6fym89zm.1
title: Anatase and rutile nanoparticles in photopolymer 3D-printed nanocomposites: Band gap-controlled electron interactions in free-radical and cationic photocuring

description: This dataset contains the following processed data: cyclic voltammograms, UV-VIS absorbance spectra, Raman spectra, STEM images, real-time FTIR and conversion data, and Jacobs working curves
DOI: 10.17632/9hk9k4bj44.1
title: German Ixodes inopinatus samples may not actually represent this tick species

description: Supplementary data related to the manuscript German Ixodes inopinatus samples may not actually represent this tick species which has been submitted for publication in the International Journal for Parasitology. A current version of the manuscript can be found as a pre-print here: https://doi.org/10.1101/2023.02.14.528458

Data included:
- Input and output files for all median-joining networks run on marker genes
- Nuclear sequences (194 x 1000bp) used in demography, diversity, and phylogenetic analysis
- Input files and outputs for al phylogenetic analyses (mitochondrial and nuclear)
- R-script for running demographic model in Jaatha
DOI: 10.17632/jj3bd76wsr.1
title: Wear resistance of smooth TiO2 coating obtained by anodic oxidation and sol-gel dip-coating combination - Research Data & Supplemental Files

description: The data represents the results of wear tests using a reciprocating ball-on-flat equipment. The counterpart was a conical, hemispherical tip with a radius of 10 microns. The counterpart oscillated at 0.7 Hz with an amplitude of 4 mm. The loads applied were 39, 78, 117, and 156 mN for 1, 2, 3, and 4 minutes, respectively. The tests were conducted at 22 ± 2 °C, with 40 ± 10% humidity, and without lubrication.
The tests were performed on:
-Two samples of Ti-6Al-4V (TI-1 and TI-2)
-Two samples of Ti-6Al-4V coated with compact and crystalline TiO2, with a thickness of approximately 100 nm (TSS-1 and TSS-2).
-Four samples of Ti-6Al-4V coated with crystalline and semicompact TiO2, with a thickness of approximately 600 nm (TASS-1, TASS-2, TASS-3 y TASS-4).
All surfaces had the same roughness: Ra = 50 nm (measured with a profilometer) and Ra = 15 nm (measured with an AFM). 
For each wear scar, the following measurements were taken:
-The width of the wear scar (2r)
-The penetration of the counterpart (d)
-The volume of wear (V).
DOI: 10.17632/svhr62dxx3.1
title: Awake hippocampal synchronous events are incorporated into offline neuronal reactivation

description: In each folder, LFP data and spike data during rest and task periods are uploaded.
DOI: 10.17632/t2kzy9tjvj.1
title: data for the manuscript 'Ab initio study of magnesium and sulfate impurities in CaCO3 and their effects on mineral-solution equilibrium isotope fractionations' by Chirantan Pramanik and Itay Halevy

description: DFT and DFPT calculations files (using plane wave PBE xc-functional and the PAW pseudopotentials in Quantum ESPRESSO and DFT-B3LYP functional and Pople basis sets in Gaussian) for the manuscript 'Ab initio study of magnesium and sulfate impurities in CaCO3 and their effects on mineral-solution equilibrium isotope fractionations' by Chirantan Pramanik and Itay Halevy. Python scripts for partition functions and stable isotope fractionation calculations are also included.
DOI: 10.17632/t2kzy9tjvj.2
title: data for the manuscript 'Ab initio density functional theory study of magnesium and sulfate impurities in CaCO3 and their effects on mineral-solution equilibrium isotope fractionations' by Chirantan Pramanik and Itay Halevy

description: DFT and DFPT calculations output files and phonon csv files (using plane wave PBE xc-functional and the PAW pseudopotentials in Quantum ESPRESSO and DFT-B3LYP functional and Pople basis sets in Gaussian) for the manuscript 'Ab initio density functional theory study of magnesium and sulfate impurities in CaCO3 and their effects on mineral-solution equilibrium isotope fractionations' by Chirantan Pramanik and Itay Halevy. Python scripts for partition functions and stable isotope fractionation calculations are also included.
DOI: 10.17632/xxkbhd7k5b.1
title: Influence of maternal hierarchical position on offspring rank acquisition: the case of captive collared peccaries (Dicotyles tajacu)

description: Social data used for sociality metrics calculation
DOI: 10.17632/pfgfbv3rjx.1
title: Effect of cell membrane tension on the lifetime and size of mature clathrin-coated pits and their spatial distribution

description: Clarthin coated pits images scanned by SIM on fix spread cells and scanned by TRIF on bottom of living cells
DOI: 10.17632/f7fvmmsd86.4
title: WristInsight Vendor Data

description: The dataset to be published was generated through exploratory case studies conducted on wrist-worn devices from three vendors: Huawei, Amazfit, and Xiaomi. The specific devices investigated include the Huawei Fit 2 Smartwatch and Band 7, Amazfit Band 7, and Xiaomi Watch 3. These devices operate on different operating systems, namely Android Wear, Zepp OS, and Wear OS.

The data collection period for each device varies, with Huawei having approximately one year of data collected, while the other devices have shorter durations. All wrist-wear devices from different vendors were connected to an iPhone 11 mobile device, which acted as the host device. The iPhone facilitated data synchronization and provided access to the data through the respective health applications provided by the vendors.

To extract the data, MD-NEXT was employed, and the extracted data was further analyzed using the MD-RED tool. These tools were chosen due to their recognized forensically sound capabilities. As a result, the dataset contains data that is considered suitable for use in digital forensics fields.

Overall, the dataset provides valuable information obtained from wrist-worn devices, covering multiple vendors, operating systems, and data collection periods. Researchers in the digital forensics field can utilize this dataset for various investigative and analytical purposes.
DOI: 10.17632/4xwtjbx2wk.1
title: The role of online emotions and gender in the prediction of problematic internet use

description: The objective of the research is to analyze whether emotional online content and socio-emotional e-competencies predict problematic internet use in the university population according to gender and country, as well as to compare the level of these variables in 1524 university students (50.2% Spain vs. 49.8% Mexico). Descriptive analyses of the variables used are performed, differentiating by gender and country, using the nonparametric Kruskal Wallis test. The relationships between variables are then analyzed by means of nonparametric bivariate correlations with Spearman's Rho. Correlational analyses between the variables are performed using Fisher's Z-transformation, differentiated by gender and country. The ability of the variables to predict problematic internet use, differentiating between girls and boys, is then examined using Multiple Linear Regression. In the regressions, the variables are included in blocks to avoid possible collinearity, and the Step-wise method is used within each block to assess the contribution of new variables.
DOI: 10.17632/47z3s4fnzh.1
title: Nutrient and total dissolved carbon (TOC) concentrations as well as pH in the water column in the Gdańsk Basin (southern Baltic Sea) in summer 2023

description: Concentration of nutrients and total dissolved carbon (TOC) and pH was analyzed in the water column of five stations located in the Gdańsk Basin (southern Baltic Sea). Samples were collected during a cruise aboard the RV Oceanograf (owned by the University of Gdańsk) from July 28 to August 5, 2023. Station depths were 52 m for MET2, 82 m for MET1-MP and MET1-REF, 89 m for MET1-BH and 103 m for ZGG. The MET1-BH station is a small but very active pokmark with strong and concentrated methane outflow, and MET1-MP is an extensive pokmark with diffuse gas outflow. MET2 is shallow gas regular accumulation in close proximity to the coast. The MET-REF and ZGG station represents anaerobic sediment with no signs of gas accumulation in the upper layers. The purpose of the study was to determine whether pH and nutrient concentrations in the water column change as a result of methane from the sediment.
DOI: 10.17632/ppf3k7pdp9.1
title: Effects of Brief Mindfulness Meditation Training on Attention and Dispositional Mindfulness in Young Adult Males

description: the raw data of the outcome measures from the pretest to the posttest for the BMM and the control groups in terms of the FFMQ, ANT, attention concentration task, attention assignment task, and salivary cortisol.
DOI: 10.17632/xd8s497nsz.1
title: Data for: Defect Landscape Engineering to Tune Skyrmion-Antiskyrmion Systems in FeGe

description: A promising architecture for next-generation, low energy spintronic devices uses skyrmions— nanoscale whirlpools of magnetic moments— as information carriers. Notably, schemes for racetrack memory have been proposed in which skyrmions and antiskyrmions, their antiparticle, serve as the logical bits 1 and 0. However, major challenges exist to designing skyrmion-antiskyrmion based computing. The presence of both particles in one material is often mutually exclusive such that few systems have been identified in which they coexist, and in these systems their appearance is stochastic rather than deterministic. Here, we create a tunable skyrmion-antiskyrmion system in FeGe films through ion-irradiation and annealing, and detail the structural properties of the films under these various conditions. Specifically, we irradiate epitaxial B20-phase FeGe films with 2.8 MeV Au4+ ions, showing evidence that the amorphized regions preferentially host antiskyrmions at densities controlled by the irradiation fluence. In this work, we focus on a subsequent, systematic electron diffraction study with in-situ annealing, demonstrating the ability to recrystallize controllable fractions of the material at temperatures ranging from approximately 150°C to 250°C, enabling further tunability of skyrmion/antiskyrmion populations. We describe the crystallization kinetics using the Johnson-Mehl-Avrami-Kolmogorov model, finding that growth of crystalline grains is consistent with diffusion-controlled one-to-two dimensional growth with a decreasing nucleation rate. The procedures developed here can be applied towards creation of skyrmion-antiskyrmion systems for energy efficient, high density data storage, spin wave emission produced by skyrmion-antiskyrmion pair annihilation, and more generally testbeds for research on skyrmion-antiskyrmion liquids and crystals.

This dataset includes all the raw data and the Python script used for data analysis and figure generation for the paper. This includes .csv files containing the data used in figures, microscopy images (.tif files), python code used for the analysis, and an Origin file (.opju) containing all figures and data spreadsheets, which can be opened using Origin Viewer, a free application that permits viewing and copying of data contained in Origin project files.