cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/dk3pfbb8f5.1
title: Novel variants in PCCA and PCCB Genes in Chinese Patients with propionic acidemia

description: Propionic acidemia (PA) is an autosomal recessive metabolic disorder caused by the deficiency of the mitochondrial protein propionyl-CoA carboxylase (PCC) and associated with pathogenic variants in either of the two genes, PCCA or PCCB. In the present study, three PA patients were diagnosed by using gas chromatography-mass spectrometry(GC-MS), tandem mass spectrometry (MS/MS) and Molecular diagnostic methods. All patients had onset in neonatal period. One patient died of infection and metabolic decompensation, and the other two had mild to moderate developmental delay/mental retardation. Mutation analysis of the PCCA gene identified compound heterozygous c.1288C&gt;T(p.R430X) and c.2002G&gt;A(p.G668R) in patient 1, homozygous c.1426C&gt;T(p.R476X) in patient 2; mutation analysis of the PCCB gene identified compound heterozygousc.359_360del AT(p.Y120Cfs*40) and c.1398+1G&gt;A in patient 3. Three novel mutations (c.1288C&gt;T, c.359_360del AT and c.1398+1G&gt;A were identified in PCCA and PCCB genes. Among them, in the PCCA gene, c.1288C&gt;T(p.R430X) was a nonsense mutation, resulting in a truncated protein. c.359_360del AT was a frameshift mutation, leading to p.Y120Cfs*40 mutation of amino acid sequence in PCCB. c.1398+1G&gt;A was a splicing mutation, causing skipping of the exons 13-14. In conclusion, the novel mutations of this study will expands the mutation spectrum of PA.
DOI: 10.17632/dk3pfbb8f5.2
title: Novel variants in PCCA and PCCB Genes in Chinese Patients with propionic acidemia

description: Propionic acidemia (PA) is an autosomal recessive metabolic disorder caused by the deficiency of the mitochondrial protein propionyl-CoA carboxylase (PCC) and associated with pathogenic variants in either of the two genes, PCCA or PCCB. In the present study, three PA patients were diagnosed by using gas chromatography-mass spectrometry(GC-MS), tandem mass spectrometry (MS/MS) and Molecular diagnostic methods. All patients had onset in neonatal period. One patient died of infection and metabolic decompensation, and the other two had mild to moderate developmental delay/mental retardation. Mutation analysis of the PCCA gene identified compound heterozygous c.1288C&gt;T(p.R430X) and c.2002G&gt;A(p.G668R) in patient 1, homozygous c.1426C&gt;T(p.R476X) in patient 2; mutation analysis of the PCCB gene identified compound heterozygousc.359_360del AT(p.Y120Cfs*40) and c.1398+1G&gt;A in patient 3. Three novel mutations (c.1288C&gt;T, c.359_360del AT and c.1398+1G&gt;A were identified in PCCA and PCCB genes. Among them, in the PCCA gene, c.1288C&gt;T(p.R430X) was a nonsense mutation, resulting in a truncated protein. c.359_360del AT was a frameshift mutation, leading to p.Y120Cfs*40 mutation of amino acid sequence in PCCB. c.1398+1G&gt;A was a splicing mutation, causing skipping of the exons 13-14. In conclusion, the novel mutations of this study will expands the mutation spectrum of PA.
DOI: 10.5281/zenodo.3715978
title: IO Islamic 2413. Ta'rîkh-i- Sulṭân Muḥammad Ḳuṭbshâhî, History of the Ḳuṭbshâhî Dynasty of Gulkundah

description: IO Islamic 2413. Ta’rîkh-i- Sulṭân Muḥammad Ḳuṭbshâhî, History of the Ḳuṭbshâhî Dynasty of Gulkundah
DOI: 10.5281/zenodo.3715977
title: IO Islamic 2413. Ta'rîkh-i- Sulṭân Muḥammad Ḳuṭbshâhî, History of the Ḳuṭbshâhî Dynasty of Gulkundah

description: IO Islamic 2413. Ta’rîkh-i- Sulṭân Muḥammad Ḳuṭbshâhî, History of the Ḳuṭbshâhî Dynasty of Gulkundah
DOI: 10.17632/dk3pfbb8f5.3
title: Novel variants in PCCA and PCCB Genes in Chinese Patients with propionic acidemia

description: Propionic acidemia (PA) is an autosomal recessive metabolic disorder caused by the deficiency of the mitochondrial protein propionyl-CoA carboxylase (PCC) and associated with pathogenic variants in either of the two genes, PCCA or PCCB. In the present study, three PA patients were diagnosed by using gas chromatography-mass spectrometry(GC-MS), tandem mass spectrometry (MS/MS) and Molecular diagnostic methods. All patients had onset in neonatal period. One patient died of infection and metabolic decompensation, and the other two had mild to moderate developmental delay/mental retardation. Mutation analysis of the PCCA gene identified compound heterozygous c.1288C&gt;T(p.R430X) and c.2002G&gt;A(p.G668R) in patient 1, homozygous c.1426C&gt;T(p.R476X) in patient 2; mutation analysis of the PCCB gene identified compound heterozygousc.359_360del AT(p.Y120Cfs*40) and c.1398+1G&gt;A in patient 3. Three novel mutations (c.1288C&gt;T, c.359_360del AT and c.1398+1G&gt;A were identified in PCCA and PCCB genes. Among them, in the PCCA gene, c.1288C&gt;T(p.R430X) was a nonsense mutation, resulting in a truncated protein. c.359_360del AT was a frameshift mutation, leading to p.Y120Cfs*40 mutation of amino acid sequence in PCCB. c.1398+1G&gt;A was a splicing mutation, causing skipping of the exons 13-14. In conclusion, the novel mutations of this study will expands the mutation spectrum of PA.
DOI: 10.17632/7p27nk75k3.2
title: Assessment of a New Volumetric Capnography-derived Parameter to Reflect Compression Depth and to Predict Return of Spontaneous Circulation during Cardiopulmonary Resuscitation in a Porcine Model

description: This experimental cross-over study using a domestic pig model evaluated a volumetric capnography-derived parameter, the volume of CO2 eliminated per minute and per kg body weight (V’CO2kg-1), as an indicator of quality of chest compression (CC) and as a predictor of return of spontaneous circulation (ROSC) under stable ventilation status following cardiac arrest. Animals were subjected to untreated ventricular fibrillation, followed by mechanical cardiopulmonary resuscitation (CPR) and ventilation. Three types of CC quality were tested, followed by advanced life support, consecutively. We believe that our study makes a significant contribution to the literature because we showed that CC quality had a significant effect on the partial pressure of end-tidal carbon dioxide (PETCO2), V’CO2kg-1, and other hemodynamic variables. While, V’CO2 kg-1 had similar performance as PETCO2 in terms of CC quality and ability to predict to ROSC, V’CO2kg-1 requires a longer time to achieve a stable state.
DOI: 10.17632/7p27nk75k3.3
title: Assessment of a New Volumetric Capnography-derived Parameter to Reflect Compression Depth and to Predict Return of Spontaneous Circulation during Cardiopulmonary Resuscitation in a Porcine Model

description: This experimental cross-over study using a domestic pig model evaluated a volumetric capnography-derived parameter, the volume of CO2 eliminated per minute and per kg body weight (V’CO2kg-1), as an indicator of quality of chest compression (CC) and as a predictor of return of spontaneous circulation (ROSC) under stable ventilation status following cardiac arrest. Animals were subjected to untreated ventricular fibrillation, followed by mechanical cardiopulmonary resuscitation (CPR) and ventilation. Three types of CC quality were tested, followed by advanced life support, consecutively. We believe that our study makes a significant contribution to the literature because we showed that CC quality had a significant effect on the partial pressure of end-tidal carbon dioxide (PETCO2), V’CO2kg-1, and other hemodynamic variables. While, V’CO2 kg-1 had similar performance as PETCO2 in terms of CC quality and ability to predict to ROSC, V’CO2kg-1 requires a longer time to achieve a stable state.
DOI: 10.17632/b4z79p2xsp.1
title: Data for Olfactory Function of Chinese PD Patients: an Event Related fMRI Study

description: Hyposmia is one of the early signs in idiopathic Parkinson’s disease (PD). Olfactory stimuli were applied during fMRI scanning to show disease-related modulation of central nervous system structures and to advance our understanding of olfactory dysfunction in PD patients. Although there are a few fMRI studies on hyposmia, the findings are inclusive. Therefore, Using a block design of at a 3.0 T scanner we investigated a total of 19 PD patients and 20 age matched controls, while passively perceiving a positively valenced (rose-like or lavender) odoran .Th edifferent activated brain region are also observed.
DOI: 10.17632/4dg2c9vzft.2
title: Data for: Estimating apple flower stigma temperature with infrared thermography, thermocouples, and development of a proxy temperature model for use in fire blight predictions.

description: Thermal_Imagery_Data.csv is the processed data for the infrared thermograph on flower temperatures. - The column IR_Temperature indicates the infrared temperature (in Celcius). - The column Mounted_Thermocouple is either a number or a nan. When it is a number, it refers to the thermocouple that was measuring the same flower at the time of the thermal photograph. - The column Cloud_Cover indicates the cloud cover at the time of sampling (C for cloudy, S for sunny, M for mixed, N for night). - The column ID is to distinguish each flower. Weather_Station_Data.csv is the raw weather data taken by the weather station within the orchard - Data is for 2018 and 2019, from May 1 to July 1 - The columns Max_Temperature, Min_Temperature, Mean_Temperature all refer to the hourly maximum, minimum and mean temperature recorded at the station - The columns with the added sufix "Lag" indicates that it is the data from the previous hour. - The column Cloud_Cover is to indicate the cloud cover at each hour (C for cloudy, S for sunny, N for night) Thermocouple_Data.csv is the processed thermocouple data taken from the stationnary thermocouples for both 2018 and 2019 - Each number in paranthese (ex : Temp_C_Avg(1)) designates a specific thermocouple - The columns with "Avg" are for the 5-min average temperature data, the columns with "Min" are for the 5-min minimum temperature recorded data and the columns with "Max" are for the 5-min maximum temperature recorded data. - When there is no data means that there was no recording at that time or that it was removed because the thermocouple was detached from the flower.
DOI: 10.17632/xbvrxxzphj.1
title: NMR-based analysis of nucleotide π-stacking in a crowded environment: Implications for prebiotic reactions

description: The inherent heterogeneity of the prebiotic milieu is often overlooked when studying nonenzymatic reactions. However, it is important to note that the prebiotic soup of a putative ‘RNA World’ would have been replete with a plethora of molecules resulting from complex chemical syntheses, as well as exogeneous delivery. The presence of such background molecules could lead to pertinent phenomena such as molecular crowding, which can potentially affect how a reaction would advent in a crowded milieu. In the current study, we have analyzed the effect of crowding on the stacking ability of the RNA monomers, using Nuclear Magnetic Resonance (NMR) spectroscopy. In particular, DOSY and 13C-T1 relaxation studies are carried out to understand the formation of pseudo-oligomeric species at higher nucleotide concentrations and the effect of crowding agents on such oligomers. Our findings corroborate that the purine monomers possess better stacking efficiency than pyrimidine based monomers. Significantly, this competence is further enhanced in the presence of a crowding agent. Interestingly, this enhanced stacking could result in higher sequestration of the purine monomers, putting their ready availability for relevant nonenzymatic polymerization and replication reactions into question. Taken together, this study demonstrates the need for systematic biophysical characterization of molecular crowding in the context of prebiotically pertinent processes. Unraveling such phenomena is essential to gather a real understanding of how the transition from abiotic to biotic, would have happened during the origin of life.
DOI: 10.5281/zenodo.3716009
title: PAN14 Originality: Source Retrieval

description: We provide you with a training corpus that consists of suspicious documents. Each suspicious document is about a specific topic and may consist of plagiarized passages obtained from web pages on that topic found in the ClueWeb09 corpus.
description: {"references": ["Martin Potthast, Matthias Hagen, Anna Beyer, Matthias Busse, Martin Tippmann, Paolo Rosso, and Benno Stein. Overview of the 6th International Competition on Plagiarism Detection. In Linda Cappellato, Nicola Ferro, Martin Halvey, and Wessel Kraaij, editors, Working Notes Papers of the CLEF 2014 Evaluation Labs, CEUR Workshop Proceedings, September 2014. CEUR-WS.org. ISSN 1613-0073.", "Matthias Hagen, Martin Potthast, and Benno Stein. Source Retrieval for Plagiarism Detection from Large Web Corpora: Recent Approaches. In Working Notes Papers of the CLEF 2015 Evaluation Labs, CEUR Workshop Proceedings, September 2015. CEUR-WS.org. ISSN 1613-0073."]}
DOI: 10.5281/zenodo.3716010
title: PAN14 Originality: Source Retrieval

description: We provide you with a training corpus that consists of suspicious documents. Each suspicious document is about a specific topic and may consist of plagiarized passages obtained from web pages on that topic found in the ClueWeb09 corpus.
description: {"references": ["Martin Potthast, Matthias Hagen, Anna Beyer, Matthias Busse, Martin Tippmann, Paolo Rosso, and Benno Stein. Overview of the 6th International Competition on Plagiarism Detection. In Linda Cappellato, Nicola Ferro, Martin Halvey, and Wessel Kraaij, editors, Working Notes Papers of the CLEF 2014 Evaluation Labs, CEUR Workshop Proceedings, September 2014. CEUR-WS.org. ISSN 1613-0073.", "Matthias Hagen, Martin Potthast, and Benno Stein. Source Retrieval for Plagiarism Detection from Large Web Corpora: Recent Approaches. In Working Notes Papers of the CLEF 2015 Evaluation Labs, CEUR Workshop Proceedings, September 2015. CEUR-WS.org. ISSN 1613-0073."]}
DOI: 10.5281/zenodo.3716035
title: Reviewed Forecasting Articles

description: As time series forecasting is an essential pillar in many decision-making fields, there is a broad range of academic work concerning forecasting. To this end, we reviewed 100 scientific papers published during the last 40 years. The papers were collected from the search engines: Google Schoolar, Mendely, IEEE Xplore, and Semantic Scholar. We select papers that have attracted at least on average 8.5 cites per year. The selected papers cover different topics, for example, supply chain demand, river flow, tourism, traffic, stock prices, electric/power demand, and many more.
DOI: 10.5281/zenodo.3716028
title: Mutation testing of smart contracts at scale

description: Replication package for the paper Mutation testing of smart contracts at scale. It is crucial that smart contracts are tested thoroughly due to their immutable nature. Even small bugs in smart contracts can lead to huge monetary losses. However, testing is not enough; it is also im- portant to ensure the quality and completeness of the tests. There are already several approaches that tackle this challenge with mutation test- ing, but their effectiveness is questionable since they only considered small contract samples. Hence, we evaluate the quality of smart contract mutation testing at scale. We choose the most promising of the existing (smart contract specific) mutation operators, analyse their effectiveness in terms of killability and highlight severe vulnerabilities that can be in- jected with the mutations. Moreover, we improve the existing mutation methods by introducing a novel killing condition that is able to detect a deviation in the gas consumption, i.e., in the monetary value that is required to perform transactions.
description: This work was supported in part by the National Research Foundation (NRF), Prime Minister's Office, Singapore, under its National Cybersecurity R&D Programme (Award No. NRF2016NCR-NCR002-028) and administered by the National Cybersecurity R&D Directorate.
DOI: 10.5519/qd.vj9r07af
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1001 records)
DOI: 10.5281/zenodo.3716027
title: Mutation testing of smart contracts at scale

description: Replication package for the paper Mutation testing of smart contracts at scale. It is crucial that smart contracts are tested thoroughly due to their immutable nature. Even small bugs in smart contracts can lead to huge monetary losses. However, testing is not enough; it is also im- portant to ensure the quality and completeness of the tests. There are already several approaches that tackle this challenge with mutation test- ing, but their effectiveness is questionable since they only considered small contract samples. Hence, we evaluate the quality of smart contract mutation testing at scale. We choose the most promising of the existing (smart contract specific) mutation operators, analyse their effectiveness in terms of killability and highlight severe vulnerabilities that can be in- jected with the mutations. Moreover, we improve the existing mutation methods by introducing a novel killing condition that is able to detect a deviation in the gas consumption, i.e., in the monetary value that is required to perform transactions.
description: This work was supported in part by the National Research Foundation (NRF), Prime Minister's Office, Singapore, under its National Cybersecurity R&D Programme (Award No. NRF2016NCR-NCR002-028) and administered by the National Cybersecurity R&D Directorate.
DOI: 10.5281/zenodo.3716076
title: Temperature and ADCP data collected on Lake Geneva between 2015 and 2017

description: Data collected between 2015 and 2017 on Lake Geneva by Acoustic Doppler Current Profiler (ADCP) and CTDs. One file includes all the temperature profiles, the two others are the ADCP data (up- and down-looking) at the SHL2 station (centre of the main basin). Coordinates of the SHL2 station are 534700 and 144950 in the Swiss CH1903 coordinate system. The file with the CTD data contains the coordinates of the sample location (lat, lon), times (in MATLAB time), depths (in meters) and temperatures (in °C). All files are in MATLAB .mat format.
DOI: 10.15490/fairdomhub.1.datafile.3408.1
title: SupplementaryFile1

description: Supplementary File 1 - Merged ITAG/PGSC Phureja DM gene models. Archive containing GTF, CDS and peptide fasta files for merged ITAG and PGSC gene models for S. tuberosum Group Phureja DM genome v4.04
DOI: 10.5281/zenodo.3716092
title: Dataset for Neural Network 3D Body Pose Tracking and Prediction for Motion-to-Photon Latency Compensation in Distributed Virtual Reality

description: Distributed Virtual Reality (DVR) systems enable geographically dispersed users to interact in a shared virtual environment. The realism of the interaction is crucial to increase the feeling of co-presence. Latency, produced either by hard- or software components of DVR applications, impedes reaching high realism levels of the DVR experience. For example, the time delay between the user's motion and the corresponding display rendering of the DVR system might lead to adverse effects such as a reduced sense of presence or motion sickness. One way of minimizing the latency is to predict user's motion and thus compensate for the inherent latency in the system. In order to address this problem, we propose a neural network 3D pose tracking and prediction system with latency guarantees for end-to-end avatar reconstruction. We evaluate and compare our system against multiple traditional methods and provide a thorough analysis on real-world human motion data. Datasets used in the paper experiments. Datasets used in paper experiments.
DOI: 10.5281/zenodo.3716093
title: Dataset for Neural Network 3D Body Pose Tracking and Prediction for Motion-to-Photon Latency Compensation in Distributed Virtual Reality

description: Distributed Virtual Reality (DVR) systems enable geographically dispersed users to interact in a shared virtual environment. The realism of the interaction is crucial to increase the feeling of co-presence. Latency, produced either by hard- or software components of DVR applications, impedes reaching high realism levels of the DVR experience. For example, the time delay between the user's motion and the corresponding display rendering of the DVR system might lead to adverse effects such as a reduced sense of presence or motion sickness. One way of minimizing the latency is to predict user's motion and thus compensate for the inherent latency in the system. In order to address this problem, we propose a neural network 3D pose tracking and prediction system with latency guarantees for end-to-end avatar reconstruction. We evaluate and compare our system against multiple traditional methods and provide a thorough analysis on real-world human motion data. Datasets used in the paper experiments. Datasets used in paper experiments.
DOI: 10.5281/zenodo.3716095
title: IO Islamic 2978. Ḥadîḳat-alsalâṭîn, The History of Sulṭân 'Abdallâh Ḳuṭbshâh of Gulkundah

description: IO Islamic 2978. Ḥadîḳat-alsalâṭîn, The History of Sulṭân ‘Abdallâh Ḳuṭbshâh of Gulkundah
DOI: 10.5281/zenodo.3716094
title: IO Islamic 2978. Ḥadîḳat-alsalâṭîn, The History of Sulṭân 'Abdallâh Ḳuṭbshâh of Gulkundah

description: IO Islamic 2978. Ḥadîḳat-alsalâṭîn, The History of Sulṭân ‘Abdallâh Ḳuṭbshâh of Gulkundah
DOI: 10.5258/soton/d1015
title: Computational data for: Photocatalytic Proton Reduction by a Computationally Identified, Molecular Hydrogen-Bonded Framework

description: Crystal structure prediction dataset for molecules included in the publication Photocatalytic Proton Reduction by a Computationally Identified, Molecular Hydrogen-Bonded Framework, Journal of Materials Chemistry A (2020) Crystal structure files (CIF format) for the four molecules: 1,3,6,8-tetraphenylpyrene (TPhP), 1,3,6,8-tetrapyridin-4-yl pyrene (TPyP), and 1,3,6,8-tetra(4’-carboxyphenyl)pyrene (TBAP). All crystal structures generated for each molecules are included as separate files for each conformer of each molecule. Calculated energies and densities are included in the CIF for each structure. Energies include the intermolecular interactions and the conformational energy with respect to the lowest energy conformer of the isolated molecule. Files are also included with calculated properties of each structure. These are provided in csv format. These files include the structure key (which can be referenced against the structures included in the CIF files) and calculated properties. One file per molecule is provided with accessible surface area calculated for each predicted crystal structure. A second file per molecule is included with calculated information on the stacking on molecules in the crystal structures.
DOI: 10.5258/soton/d1062
title: Dataset for: Ultra-short wavelength operation of thulium doped fiber amplifiers and lasers

description: Dataset supports: Chen, S, et al. (2019). Ultra-short wavelength operation of thulium doped fiber amplifiers and lasers. Optics Express.
DOI: 10.5281/zenodo.3715345
title: Free-Space Optics Transmission with Time-Adaptive PCS Modulation

description: This dataset contains several batches of received optical signal of an outdoor free-space optics (FSO) link (during raining weather conditions) obtained from continuous measurement (3-hours) with a high-speed coherent optical transmission testbed (400G+). Further details on the experimental setup and acquisition conditions can be consulted in https://arxiv.org/abs/1907.12120
DOI: 10.5281/zenodo.3715346
title: Free-Space Optics Transmission with Time-Adaptive PCS Modulation

description: This dataset contains several batches of received optical signal of an outdoor free-space optics (FSO) link (during raining weather conditions) obtained from continuous measurement (3-hours) with a high-speed coherent optical transmission testbed (400G+). Further details on the experimental setup and acquisition conditions can be consulted in https://arxiv.org/abs/1907.12120
DOI: 10.5281/zenodo.3716087
title: IO Islamic 2908. Ta'rîkh-i- Sulṭân Muḥammad Ḳuṭbshâhî, History of the Ḳuṭbshâhî Dynasty of Gulkundah

description: IO Islamic 2908. Ta’rîkh-i- Sulṭân Muḥammad Ḳuṭbshâhî, History of the Ḳuṭbshâhî Dynasty of Gulkundah