cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1285450.10fu
title: SH1285450.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1285451.10fu
title: SH1285451.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1285454.10fu
title: SH1285454.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1285455.10fu
title: SH1285455.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1285458.10fu
title: SH1285458.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.u836np
title: Occurrence Download

description: A dataset containing 11845561 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 11845561 records from 4316 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004185-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29558837
title: Supplementary Material for: Sex Associated Differential Expressions of the Alternatively Spliced Variants mRNA of OPRM1 in Brain Regions of C57BL/6 Mouse

description: <b><i>Background/Aims:</i></b> Opiates are potent analgesics but their clinical use is limited by sex-associated side effects, such as drug tolerance, opioid-induced hyperalgesia and withdrawal reaction. OPRM1, as the main receptor of opioids, plays an important role in the pharmacological process of opioids in rodents and human. We have previously investigated OPRM1, the μ opioid receptor gene, which have dozens of alternatively spliced variants probably correlating with opioid-induced effects in brain regions of four inbred mouse strains and demonstrated the strain-specific expressions of these splice variants. Also, within a strain, the regional expression patterns of some of the variants were similar while others were opposite. Thus, we are aiming to seek out the relationship between sex differences and these alternatively spliced variants. <b><i>Methods:</i></b> The present studies follow a SYBR green quantitative PCR (qPCR) which we had used before to examine the expression of OPRM1 splice variant mRNAs in selected brain regions of male and female C57BL/6 mice. Sex-associated differences in baseline latency, opioid-induced tolerance, analgesia and addiction were examined and determined by Tail-flick test, jumps and statistical analysis. <b><i>Results:</i></b> The mRNA levels of opioid receptor gene splice variants in male and female mice showed significant differences among the brain regions, implying region-specific alternative splicing of the OPRM1 gene, which was consistent with our previous study. More importantly, the complete mRNA expression profiles of the OPRM1 splice variants was also gender-specific, suggesting a sexual influence on OPRM1 alternative splicing. <b><i>Conclusion:</i></b> In brief, we put forward that the distinctions among baseline latency, opioid-induced tolerance, analgesia and physical dependence in male and female mice might correlate with sex associated differential expressions of OPRM1 gene.
DOI: 10.6084/m9.figshare.29558837.v1
title: Supplementary Material for: Sex Associated Differential Expressions of the Alternatively Spliced Variants mRNA of OPRM1 in Brain Regions of C57BL/6 Mouse

description: <b><i>Background/Aims:</i></b> Opiates are potent analgesics but their clinical use is limited by sex-associated side effects, such as drug tolerance, opioid-induced hyperalgesia and withdrawal reaction. OPRM1, as the main receptor of opioids, plays an important role in the pharmacological process of opioids in rodents and human. We have previously investigated OPRM1, the μ opioid receptor gene, which have dozens of alternatively spliced variants probably correlating with opioid-induced effects in brain regions of four inbred mouse strains and demonstrated the strain-specific expressions of these splice variants. Also, within a strain, the regional expression patterns of some of the variants were similar while others were opposite. Thus, we are aiming to seek out the relationship between sex differences and these alternatively spliced variants. <b><i>Methods:</i></b> The present studies follow a SYBR green quantitative PCR (qPCR) which we had used before to examine the expression of OPRM1 splice variant mRNAs in selected brain regions of male and female C57BL/6 mice. Sex-associated differences in baseline latency, opioid-induced tolerance, analgesia and addiction were examined and determined by Tail-flick test, jumps and statistical analysis. <b><i>Results:</i></b> The mRNA levels of opioid receptor gene splice variants in male and female mice showed significant differences among the brain regions, implying region-specific alternative splicing of the OPRM1 gene, which was consistent with our previous study. More importantly, the complete mRNA expression profiles of the OPRM1 splice variants was also gender-specific, suggesting a sexual influence on OPRM1 alternative splicing. <b><i>Conclusion:</i></b> In brief, we put forward that the distinctions among baseline latency, opioid-induced tolerance, analgesia and physical dependence in male and female mice might correlate with sex associated differential expressions of OPRM1 gene.
DOI: 10.15468/dl.26xn9z
title: Occurrence Download

description: A dataset containing 71439 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Corchorus aestuans, Cordia alliodora, Cordia lutea, Cordia myxa, Cordia sebestena, Cordyline fruticosa, Coreopsis basalis, Coreopsis tinctoria, Corymbia citriodora, Corymbia maculata)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 71439 records from 872 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011053-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6dzgsv
title: Occurrence Download

description: A dataset containing 32495 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Abutilon theophrasti"
 ]
}

 The dataset includes 32495 records from 539 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013827-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/705-2gy-mjm
title: Gyroidina altiformis Stewart & Stewart, 1930

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pkj-xrz-7nf
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7fj-42p-b1r
title: Carpentaria Lowry, Springthorpe & Myers, 2020

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zxc-zl5-6aj
title: Sorites orbiculus (Forsskål in Niebuhr, 1775)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ctk-jvq-paq
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5cw-gp9-0h9
title: Planctostoma luculentum (Brady, 1884)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ak3-d9b-2qj
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8wp-rth-yv8
title: Poroeponides lateralis (Terquem, 1878)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sys-8zl-erx
title: Rotorbinella rosea (d'Orbigny in Guérin-Méneville, 1832)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2vd-19e-fpx
title: Pseudoclavulina mexicana (Cushman, 1922)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pfs-eaj-x8e
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zrb-ynw-tep
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b4r-rqg-ky0
title: Gavelinopsis umbonifera (Parr, 1950)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n7z-fhw-yye
title: †Cribrogenerina Schubert, 1908

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.mbq37f
title: Occurrence Download

description: A dataset containing 210396 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachemys scripta"
 ]
}

 The dataset includes 210396 records from 1084 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013695-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9j0b7jr
title: Hierarchically nested and biologically relevant monitoring frameworks for Greater Sage-grouse, 2019, Nevada and Wyoming, Interim

description: We developed a hierarchical clustering approach that identifies biologically relevant landscape units that can 1) be used as a long-term population monitoring framework, 2) be repeated across the Greater sage-grouse range, 3) be used to track the outcomes of local and regional populations by comparing population changes across scales, and 4) be used to inform where to best spatially target studies that identify the processes and mechanisms causing population trends to change among spatial scales. The spatial variability in the amount and quality of habitat resources can affect local population success and result in different population growth rates among smaller clusters. Equally so, the spatial structure and ecological organization driving scale-dependent systems in a fragmented landscape affects dispersal behavior, suggesting inclusion in population monitoring frameworks. Studies that compare conditions among spatially explicit hierarchical clusters may elucidate the cause of differing growth rates, indicating the appropriate location and spatial scale of a management action.

The data presented here reflect the results from developing a hierarchical monitoring framework and then applying these methods to Greater Sage-grouse in Nevada and Wyoming, US. When using these data for evaluating population changes or when identifying a spatially balanced sampling protocol, all cluster levels are designed to work together and therefore we recommend evaluating multiple cluster levels prior to selecting a single cluster level, if a single scale is desired, when analyzing population growth rates or other analyses, as these data are intended for multi-scale efforts. In other words, let your data decide which scale(s) are appropriate for the given species. These cluster levels are specific to Greater Sage-grouse but they may be appropriate for other sagebrush obligate species, but the user will need to make this determination. 

The products from this study aim to support multiple research and management needs. However, these data represent an interim data product because there may be errors associated with clusters along the edges of the state boundaries (due to the lack of lek data in neighboring states). We are planning to release new data that we will develop for the Greater sage-grouse range. We recommend using the new data products once available instead of these data products. 

These data will remain online as they are associated with the following citation, which provides a detailed explanation of the methods used to develop these data:

O'Donnell, Michael S., David R. Edmunds, Cameron L. Aldridge, Julie A. Heinrichs, Peter S. Coates, Brian G. Prochazka, and Steve E. Hanser. 2019. Designing multi-scale hierarchical monitoring frameworks for wildlife with high site fidelity to support conservation: a sage-grouse case study. Ecosphere
DOI: 10.15468/dl.dx2xaz
title: Occurrence Download

description: A dataset containing 750 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pan troglodytes schweinfurthii (Giglioli, 1872)"
 ]
}

 The dataset includes 750 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015727-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.67g8p4
title: Occurrence Download

description: A dataset containing 6382 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trifolium pratense L.)",
 "MediaType is Image",
 "Country is one of (Germany)",
 "BasisOfRecord is one of (Living Specimen, Observation, Human Observation, Machine Observation, Occurrence evidence)"
 ]
}

 The dataset includes 6382 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015724-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15498084
title: AZO-coated refractory nanoneedles as ultra-black wide-angle solar absorbers (dataset)
DOI: 10.5281/zenodo.15498085
title: AZO-coated refractory nanoneedles as ultra-black wide-angle solar absorbers (dataset)
DOI: 10.15468/dl.5uu5av
title: Occurrence Download

description: A dataset containing 363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "GadmGid is RUS.66_1",
 "TaxonKey is Vicia sylvatica L."
 ]
}

 The dataset includes 363 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015729-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9xvmtak
title: Fortymile River Cosmogenic Isotope and Luminescence Data Collected 2016-2019

description: This dataset is four tables containing cosmogenic beryllium-10 and aluminum-26 concentrations and related data, as well as infrared stimulated luminescence data, from samples collected at 21 sites along the Fortymile River in eastern Alaska and Yukon, Canada between 2016 to 2018, and processed between 2016 and 2019. The file "burialDating_siteLocations_fortymile_bender.csv" contains site locations in the NAD83 reference frame, and depositional ages or erosion rates computed from raw data contained in the other files. All files are linked by the "site_id" field.
DOI: 10.25835/hpg36of2
title: gpu-tim-thermal-resistance-study-steinhoff-2025

description: This set provides supplementary data for the following paper: 
This dataset contains calculated thermal resistance values (R<sub>th</sub>) for various Thermal Interface Materials (TIMs) used in graphics card assemblies. Calculations are based on realistic geometries, power consumption values, and thermal conductivities typical for high-performance GPUs. The effects of a proposed metallurgical bonding layer formed via Al-Cu compound casting are also evaluated. Performance comparisons are made for different TIM configurations (thermal pastes, pads, solder, compound joints) across high-end and mid-range GPU models (e.g., NVIDIA RTX 4090 and 4070). Temperature reductions are quantified as a function of interface quality and thermal power dissipation.
DOI: 10.5281/zenodo.15476914
title: Unified gravity mode and Rossby mode Analysis of Accreting White Dwarf Stars

description: This repository contains the files and related work directories used in the preparation of the paper "Unified g-mode and r-mode Analysis of Accreting White Dwarf Stars."

This has mesa models including the inlists and the gyre input files. The cooled WD model is taken from "Gravity Modes on Rapidly Rotating Accreting White Dwarfs and Their Variation after Dwarf Novae." 

The requirements are



MESA version: 15140

MESASDK version: 21.4.1

Proper environments, see MESA Documentation

GYRE version: 7.0 (GYRE Documentation)


The details of the steps on MESA models and GYRE input/output are provided in README.txt.
DOI: 10.15468/dl.nb4k8m
title: Occurrence Download

description: A dataset containing 7902 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peperomia pellucida (L.) Kunth"
 ]
}

 The dataset includes 7902 records from 375 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015728-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27274875
title: Datasets for "Abrupt shift of El Niño periodicity under CO<sub>2</sub> mitigation"

description: Datasets for Abrupt shift of El Niño periodicity under CO<sub>2</sub> mitigation. Each netcdf file corresponds to each figure.
DOI: 10.6084/m9.figshare.27274875.v2
title: Datasets for "Abrupt shift of El Niño periodicity under CO<sub>2</sub> mitigation"

description: Datasets for Abrupt shift of El Niño periodicity under CO<sub>2</sub> mitigation. Each netcdf file corresponds to each figure.
DOI: 10.6084/m9.figshare.27274875.v1
title: Abrupt shift of El Niño periodicity under CO<sub>2</sub> mitigation

description: Datasets for Abrupt shift of El Niño periodicity under CO<sub>2</sub> mitigation. Each netcdf file corresponds to each figure.
DOI: 10.15468/dl.epw5sq
title: Occurrence Download

description: A dataset containing 2386 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Polysphaeria Hook.f."
 ]
}

 The dataset includes 2386 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015735-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.