cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10439654
title: A Positive Atmospheric Feedback on the North Atlantic Warming Hole Data Availability

description: There are three files with the data required to recreate: Figure 1, Figures 2&3, and Figure 4. Contact the corresponding author (sydney.kramer@colorado.edu) for additional information. The MATLAB files contain variables including: Sea Surface Temperature (SST), Zonal Wind (u), Meridional Wind (v), Sea Level Pressure (slp), Geopotential Height (z), Virtual Temperature (VirtualTemp), Latitude (lat), Longitude (lon), Vertical Levels (lev), and coastlines (xcoast/ycoast). These variables are provided for five different experiments, CESM control, CESM NAWH, CESM NAWH-S, ECHAM control, and ECHAM NAWH.
DOI: 10.5281/zenodo.10734755
title: Forcing and output data files associated with: The Atmospheric Response to North Atlantic SST Trends, 1870–2019 (Karnauskas et al. 2021, GRL)

description: This entry contains the model forcing and output data files associated with the following paper:

Karnauskas, K. B., L. Zhang, and D. J. Amaya, 2021: The Atmospheric Response to North Atlantic SST Trends, 1870–2019. Geophys. Res. Lett., 48(2), e2020GL090677, doi: 10.1029/2020GL090677.

File format is NetCDF, and filenames match experiment names described in the above referenced paper.
DOI: 10.5281/zenodo.10838066
title: Foot kinematics and kinetics data for different static foot posture collected using a multi-segment foot model

description: Dataset presented in the paper "Foot kinematics and kinetics data for different static foot posture collected using a multi-segment foot model".

This dataset contains human foot joints kinematics and kinetics data collected during walking, classified depending on their static foot posture. The kinematics data were recorded using a three-dimensional motion analysis system, and kinetics data were recorded through a pressure platform. The data was collected considering a multi-segment foot model that considers the ankle, midtarsal and first metatarsophalangeal joint. A total of 70 healthy subjects with different static posture (highly pronated, highly supinated and normal, as classified by the foot posture index) participated in the experiments. This dataset contains a total of 350 continuous recordings of anatomical angles and joint moments of the ankle, midtarsal, and first metatarsophalangeal joints of the right foot during walking, as well as the right foot contact pressures recorded. The recordings were collected at 100 Hz, and the resulting data are provided filtered and resampled to 100 frames evenly distributed along the stance phase. Participants’ descriptive data are also provided: age, weight, height, and foot anthropometric data and foot posture index for both feet. The data are presented as a spreadsheet file (.xlsx) and a Matlab structure file (.mat), with contact pressures provided only in the .mat file. Further details and data validation are provided in the main paper.
DOI: 10.5281/zenodo.11002229
title: Site-level CH4 flux data obtained from 35 chamber sites and 47 eddy covariance sites

description: This dataset supports the manuscript "Quantifying Global Wetland Methane Emissions with In Situ Methane Flux Data and Machine Learning Approaches" currently under review. Before reusing this data, please contact the first author (chen4371@purdue.edu) for citations and recent updates.
DOI: 10.5281/zenodo.11203446
title: Dataset of some added-lignin thermoformed pulps

description: This data summarizes the material properties of some added-lignin thermoformed pulps (ALTPs). The dataset was measured on wet formed substrates with either softwood chemi-thermomechanical pulp (CTMP) or northern bleached softwood Kraft pulp (NBSK). To the basis weight of 500 g/m2 pulp fibers (6 g pulp per 15 cm by 8 cm substrate area) were added 0.8 g of lignin, constituting a loading of 13.33 % added lignin per dry fibers. Right after forming, the sheets were pressed at 20 bar and room temperature between blotting paper to remove excess water, air dried overnight, and subsequently thermopressed at 175 °C and 200 bar. The resulting materials were measured and weighed, cut into test stripes with 15 mm width, and tensile tested. The absorption of water (water uptake) was measured after immersing the test pieces (15 mm by 15 mm) in distilled water for 24 h. The data shows slight increases in density after lignin addition and, on average, a reduction in water absorption. In particular, adding acetylated lignin significantly lowered the water uptake, as compared to the regular soda or Kraft lignin. The tensile strength and stiffness of CTMP was the same or lower after lignin addition, whereas NBSK showed increases in both stiffness and strength.
DOI: 10.5281/zenodo.11647317
title: Systematic lineage tracing unveils polyclonal origin and evolution in colorectal precancer

description: Data and code for Systematic lineage tracing unveils polyclonal origin and evolution in colorectal precancer: 

This dataset contains reproducibility, pipeline and data for 4 parts of the paper, including PacBio data analysis, scRNA-seq data analysis, HumanCRC data analysis and WGS data analysis. 

See readme.txt in each folder for more details.
DOI: 10.5281/zenodo.12696383
title: Historical and Future Global Wetland Methane Emissions from 1979 to 2100

description: This dataset supports the manuscript "Quantifying Global Wetland Methane Emissions with In Situ Methane Flux Data and Machine Learning Approaches" currently under review. Before reusing this data, please contact the first author (chen4371@purdue.edu) for citations and recent updates.
DOI: 10.5281/zenodo.12748069
title: Local Differential Editing Index - Results

description: All result files and the corresponding Podman image used to generate the results are provided here:



results.tar.gz: contains differential A-to-I editing data calculated by LoDEI, Jacusa2, and REDIT for six RNA-seq datasets; results from the Alu Editing Index, and results from DESeq2.

lodei_24_07_15.tar: Podman/Docker image used to generate the results provided in results.tar.gz. 

README.html: information for the Podman image to re-run the analysis
DOI: 10.5281/zenodo.12748864
title: Local Differential Editing Index - Test Dataset

description: Test dataset and corresponding result files for the local differential editing index (LoDEI) software. See full description at https://github.com/rna-editing1/lodei
DOI: 10.5281/zenodo.1310165
title: Fruit Recognition Dataset

description: The database used in this study is comprising of 44406 fruit images, which we collected in a period of 6 months. The images where made with in our lab’s environment under different scenarios which we mention below. We captured all the images on a clear background with resolution of 320×258 pixels. We used HD Logitech web camera to took the pictures. During collecting this database, we created all kind of challenges, which, we have to face in real-world recognition scenarios in supermarket and fruit shops such as light, shadow, sunshine, pose variation, to make our model robust for, it might be necessary to cope with illumination variation, camera capturing artifacts, specular reflection shading and shadows. We tested our model’s robustness in all scenarios and it perform quit well.
DOI: 10.5281/zenodo.13860389
title: NW Galician Amphibian BD

description: Database compiled by Pedro Galán (University of A Coruña. E-mail: pedro.galan@udc.es) on the presence of breeding amphibians in water points in Galicia (NW Spain).

This dataset contains the presence/absence of amphibian species in ca. 4.000 water points in NW Spain, in relation to several environmental features and human impacts.

Dataset used for the study: Rodríguez, S., Galán, P. & Martínez-Abraín, A. (2024). Anthropogenic determinants of species presence in amphibian communities across a regional elevation gradient. Ecosphere XX: X-X.
DOI: 10.5281/zenodo.13883320
title: Celiac-superior mesenteric ganglia (CG-SMG) spatial transcriptomics

description: We prepared the spatial transcriptomics dataset for the celiac and superior mesenteric ganglia (CG-SMG) with 5 sections of 3 mice per Right (R)-CG, SMG, Left (L)-CG).
DOI: 10.5281/zenodo.14193335
title: COQTEL dataset: Corrosion Quantification Through Extended use of Lamb waves

description: Corrosion is a major threat in the aeronautic industry, both in terms of safety and cost. Ultrasonic Lamb Waves (LW) appear to be very efficient for corrosion monitoring and can be made cost effective and versatile when emitted and received by a sparse array of piezoelectric elements (PZT). A LW solution relying on a sparse PZT array and allowing to monitor corrosion pit growth on stainless 316L grade steel plate is here used to collect data during a controlled corrosion experiment. Experimentally, the corrosion pit size is electrochemically controlled by both the imposed electrical potential and the injection of a corrosive NaCl solution through a capillary located at the desired pit location. In parallel, the corrosion pit growth is monitored in-situ every 10 seconds by sending and measuring LW using a sparse array of 4 PZTs bonded to the back of the steel plate enduring corrosion. Two independent experiments were achieved in order to assess the repeatability of the proposed approach. If embedded in aeronautical structure, such an approach could be a versatile and cost-effective alternative to actual non-destructive maintenance procedures that are time and manpower consuming. This dataset can thus ease the development of associated SHM algorithms and methodologies and help filling the gap actually existing between research and industry in that domain. This dataset has been used for the article "In-situ monitoring of µm-sized electrochemically generated corrosion pits using Lamb Waves managed by a sparse array of piezoelectric transducers" published in open access in the "Ultrasonics" peer reviewed journal by the same authors as the dataset.
DOI: 10.5281/zenodo.6785643
title: Data from 666 earthquake/tsunami scenario simulations targeting Nankai subduction

description: <strong>Summary: </strong> Data from 666 earthquake/tsunami scenario simulations targeting Nankai subduction Tsunami simulation solver: TUNAMI-N2 Fault rupture model: Okada model(Okada, 1985) Each scenario data consists of 71 ASCII files containing the simulated wave sequences at the synthetic gauges Each single scenario is tagged as "Nankai-XYZE", where XYZW would be the number from <strong>0003</strong> to <strong>1470</strong>. Some of the synthetic gauges are located based on the real ocean gauge points (e.g., DONET2, NOPHAS) nearby Shikoku region, Japan. <strong>Details of each file:</strong> <strong>wave_sequenses.tar.gz</strong>: A series of wave sequences (4-hour wave history-data, recorded every 5 seconds) at 71 synthetic gauges are provided in ascii type format. <br> Note that <strong>5.8GB additional storage would be required</strong> to fully unzip this archive file with the following command. <pre><code>tar xzvf wave_sequences.tar.gz</code></pre> You can get all scenario data as follows: <pre><code>wave_sequences ├ Nankai-0003 ├ Nankai-0004 ├… ├ Nankai-1467 └ Nankai-1470 </code></pre> Each directory contains the 71 files, head with 'pntX_Y.asc', <pre><code>Nankai-0003 ├ pnt1_01.asc ├ pnt1_02.asc ├... ├ pnt5_46.asc └ pnt5_47.asc</code></pre> which contains the wave sequence data. The ASCII file, the time (minute) elapsed from the fault rupture is aligned in the left column, and the wave displacements \eta (meter) from the original surface location are in the right column. <strong>quake_params.csv</strong>: The parameter used to generate 666 earthquake scenarios caused by the rupture of rectangular fault, by means of Okada model. (Okada 1985) <strong>synthetic_gauges.csv</strong>: The locations of 71 synthetic gauges.
description: {"references": ["Okada, Yoshimitsu. \"Surface deformation due to shear and tensile faults in a half-space.\" Bulletin of the seismological society of America 75.4 (1985): 1135-1154."]}
DOI: 10.5281/zenodo.7132178
title: LISA Data Challenge Sangria (LDC2a)

description: <strong>Sangria</strong> includes two main datasets: each contains Gaussian instrumental noise and simulated waveforms from 30 million Galactic white dwarf binaries, from 17 verification Galactic binaries, and from merging massive black-hole binaries with parameters derived from an astrophysical model. The first dataset includes the full specification used to generate it: source parameters, a description of instrumental noise with the corresponding power spectral density, LISA's orbit, etc. We also release noiseless data for each type of source, for waveform validation purposes. The second dataset is <em>blinded</em>: the level of istrumental noise and number of sources of each type are not disclosed (except for the known parameters of the verification binaries). See LDC website for more details.
DOI: 10.5281/zenodo.8287917
title: Data from 1564 earthquake/tsunami scenario simulations targeting the Nankai Trough subduction zone

description: Summary:



	
Data from 1564 earthquake/tsunami scenario simulations targeting the Nankai Trough subduction zone
	
Tsunami simulation solver: TUNAMI-N2
	
Fault rupture model: Okada model (Okada, 1985)
	
Each scenario data comprises 247 ASCII files storing the simulated wave sequences at synthetic gauges.
	
Every single scenario is tagged as "JNan_X.X_YYY", where X.X indicates the magnitude and YYY is a serial number.
	
Some synthetic gauges are in identical locations to actual ocean gauges (e.g., DONET2, NOWPHAS) near Shikoku, Japan.



Details of each file:



	
data.tar.gz: A series of wave sequences (6-hour wave historical data, recorded every 5 seconds) at the 247 virtual gauges. Note that 52 GB of additional storage would be required to fully unzip this archive file with the following command.

	
tar xzvf data.tar.gz

	
The unzipped directory contains all scenario data as follows:

	
data
├── JNan_7.6_001
├── JNan_7.6_002
├── JNan_7.6_003
├──
├──
├── JNan_8.8_326
├── JNan_8.8_327
└── JNan_8.8_328

	
Each directory contains 247 files named 'pntX_YY.asc'.

	
JNan_X.X_YYY
├── pnt1_01.asc
├── pnt1_02.asc
├── pnt1_03.asc
├──
├──
├── pnt5_46.asc
├── pnt5_47.asc
└── pnt5_48.asc

	
In each ASCII file, the time (minute) elapsed from the fault rupture is aligned in the left column, and the wave displacements (meter) from the original sea level are in the right column.
	
	

	
quake_params.csv: The parameter used to generate 1564 earthquake scenarios caused by the rupture of rectangular fault, by means of the Okada model (Okada 1985)
	
	

	
synthetic_gauges.csv: The locations of the 247 synthetic gauges
DOI: 10.6069/ghcw-8955
title: Global Burden of Disease Study 2019 (GBD 2019) Cause List Mapped to ICD Codes

description: "The Global Burden of Disease Study 2019 (GBD 2019), coordinated by the Institute for Health Metrics and Evaluation (IHME), estimated the burden of diseases, injuries, and risk factors for 204 countries and territories and selected subnational locations.

This table contains the GBD 2019 cause list mapped to International Classification of Diseases (ICD) codes: ICD-10, ICD-10 used in hospital/claim analyses, ICD-9 and ICD-9 used in hospital/claim analyses.

For additional GBD results and resources, visit the GBD 2019 Data Resources page."
DOI: 10.6073/pasta/4fb183a9b4480ce9748570c3716c3813
title: Harvard Forest Climate Data since 1964

description: This dataset provides daily minimum, maximum, and mean air temperature and 24-hour precipitation data from Harvard Forest for long-term climate studies. It combines measurements from the original manual weather station (Shaler Met Station, 1964-2002, 42.53167 N, 72.18937 W, dataset HF000) with measurements from the current automated weather station (Fisher Met Station, since 2001, 42.53311 N, 72.18968 W, dataset HF001). Gaps in the Shaler data were filled using data from nearby stations. Data from a 12-month period when both stations were operational were used to adjust the Shaler data to account for differences in microclimate at the two sites. This dataset is updated annually.
DOI: 10.6084/m9.figshare.19050569
title: Metadata record for: Climate Stability Index maps, a global high resolution cartography of climate stability from Pliocene to 2100

description: This dataset contains key characteristics about the data described in the Data Descriptor Climate Stability Index maps, a global high resolution cartography of climate stability from Pliocene to 2100. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.24636933
title: Data file 4 - Protein content of <i>Pistia stratiotes</i> related to pollutants exposure time

description: Data information used in the meta-analysis of relevance of exposure time of <i>Pistia stratiotes</i> to different pollutants.
DOI: 10.6084/m9.figshare.24637005
title: Data file 5 - Complete data for meta-analysis of <i>Pistia stratiotes</i> when exposed to water pollutants

description: Data information used in the meta-analysis of different pollutants on the protein content of <i>Pistia stratiotes</i>.
DOI: 10.6084/m9.figshare.26839933.v4
title: <b>Spatiotemporal variability of flash floods and their human impacts in the Czech Republic during the 2001–2023 period</b>

description: This is a companion dataset to the paper [SPATIOTEMPORAL VARIABILITY OF FLASH FLOODS AND THEIR HUMAN IMPACTS IN THE CZECH REPUBLIC DURING THE 2001–2023 PERIOD] by Brázdil et al.], to be submitted to [NATURAL HAZARDS AND EARTH SYSTEM SCIENCES].
DOI: 10.6084/m9.figshare.27308829
title: Supplementary Material for: Stroke is Not an Accident: An Integrative Review on the Use of the Term ‘Cerebrovascular Accident’

description: Background: Cerebrovascular accident (CVA) is an outdated term for describing stroke as it implies stroke is an accident. We conducted an integrative review to determine use of CVA in terms of 1) frequency in major medical journals over time; 2) associated publication characteristics (e.g., number of authors, senior author country, topic); and 3) frequency in medical records. 
Methods: We searched Google Scholar for publications in leading neurology and vascular journals (Quartile 1) across two 5-year periods (1998-2002 and 2018-2022) using the terms “cerebrovascular accident” or “CVA.” Two reviewers independently reviewed full-text publications and recorded the frequency of CVA use. Rates of use (per 1,000 articles/year) were calculated for each journal and time period. Associations of publication characteristics with CVA use were determined using multivariable logistic regression models. In addition, admission and discharge forms in the Auckland Regional Community Stroke Study (ARCOS V) were audited for frequency of use of the term CVA. 
Results: Of the 1,643 publications retrieved, 1,539 were reviewed in full. Of these, CVA was used ≥1 time in 676 publications, and ≥2 times in 276 publications (129 in 1998-2002; 147 in 2018-2022). The terms CVA and stroke both appeared in 57% of publications where CVA was used ≥2 times in 1998-2002, compared to 65% in 2018-2022. Majority of publications were on the topic of stroke (22% in 1998-2002; 20% in 2018-2022). There were no associations between publication characteristics and the use of CVA. The highest rate of CVA use in 2018-2022 was in Circulation, and increased over time from 1.3 uses per 1,000 publications in 1998-2002 to 1.8 uses per 1,000 publications in 2018-2022. The largest reduction the use of CVA was in Neuroepidemiology (2.0 uses per 1,000 publications in 1998-2002 to 0 uses in 2018-2022). The term CVA was identified in 0.2% of stroke admission and discharge forms audited (17/7808). 
Conclusion: We found evidence of changes in the use of CVA in the scientific literature over the past two decades. Editors, authors and clinicians should avoid the use of the term CVA as it perpetuates the use of a non-specific, non-diagnostic, and non-scientific term.
DOI: 10.7265/n5zs2tft
title: MASAM2: Daily 4 km Arctic Sea Ice Concentration, Version 1
DOI: 10.18140/flx/1669368
title: FLUXNET-CH4 BR-Npw Northern Pantanal Wetland

description: This is the FLUXNET-CH4 version of the carbon flux data for the site BR-Npw Northern Pantanal Wetland.
DOI: 10.18140/flx/1669688
title: FLUXNET-CH4 US-NGC NGEE Arctic Council

description: This is the FLUXNET-CH4 version of the carbon flux data for the site US-NGC NGEE Arctic Council.
DOI: 10.18140/flx/1669693
title: FLUXNET-CH4 US-Sne Sherman Island Restored Wetland

description: This is the FLUXNET-CH4 version of the carbon flux data for the site US-Sne Sherman Island Restored Wetland.
DOI: 10.5281/zenodo.10779223
title: Research data supporting "Hyperspectral unmixing for Raman spectroscopy via physics-constrained autoencoders"

description: Experimental and synthetic Raman data used in Georgiev et al., PNAS (2024) DOI:10.1073/pnas.2407439121.
DOI: 10.15468/dl.dv5nv4
title: Occurrence Download

description: A dataset containing 374081 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "Year 2000-2024"
 ]
}

 The dataset includes 374081 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009745-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rx58ps
title: Occurrence Download

description: A dataset containing 1821 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "License is one of (CC0 1.0, CC-BY 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Carya Nutt.",
 "Year 2020-2022"
 ]
}

 The dataset includes 1821 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009757-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cyv9pk
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Chamaesium thalictrifolium H.Wolff)"
 ]
}

 The dataset includes 71 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009758-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qtxjmk
title: Occurrence Download

description: A dataset containing 562 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Toona sinensis (A.Juss.) M.Roem.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 562 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009759-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z4s2f7
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Chamaesium viridiflorum (Franch.) H.Wolff ex R.H.Shan)"
 ]
}

 The dataset includes 32 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009760-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.