cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7294/28390157
title: Spotted Lanternfly detection data - ORT, FE and LEORT

description: The Spotted Lanternfly (SLF) is an invasive plant hopper species in the United States (US) first detected in Pennsylvania in 2014. SLF target grape vines, apples, and hops causing millions of dollars in agricultural losses yearly. Due to its life cycle, the most effective way to mitigate and prevent its long-distance migration is to detect the egg masses and eradicate them. Currently, early detection relies on human visual inspection which is very difficult and inefficient. Dogs have been shown to be highly effective in detecting the egg masses and discriminating SLF egg masses from common environmental distractors; however, to effectively employ dogs to stem the spread of SLF would require many more trained dogs than available through government agencies. The purpose of this study was to evaluate the effectiveness of community scientist dog teams to attain standardized detection criteria. Handler teams were recruited from around the US and provided with devitalized SLF egg masses to use when training their dogs. The handlers were then evaluated with an odor recognition test, and a field test over a period of 3 – 6 months. Training and preparation for the evaluations were completed at the discretion of the enrolled handler teams, overseen by a local trainer. We evaluated the dogs' performance in two sequential experiments. We found that the community scientist dog teams were able to achieve a sensitivity of 81\% during controlled testing and 58\% during field trials. These results demonstrate a proof-of-concept; community scientist dog teams could play a significant part in protecting their local environments and agriculture from invasive species.
DOI: 10.7294/28390157.v1
title: Spotted Lanternfly detection data - ORT, FE and LEORT

description: The Spotted Lanternfly (SLF) is an invasive plant hopper species in the United States (US) first detected in Pennsylvania in 2014. SLF target grape vines, apples, and hops causing millions of dollars in agricultural losses yearly. Due to its life cycle, the most effective way to mitigate and prevent its long-distance migration is to detect the egg masses and eradicate them. Currently, early detection relies on human visual inspection which is very difficult and inefficient. Dogs have been shown to be highly effective in detecting the egg masses and discriminating SLF egg masses from common environmental distractors; however, to effectively employ dogs to stem the spread of SLF would require many more trained dogs than available through government agencies. The purpose of this study was to evaluate the effectiveness of community scientist dog teams to attain standardized detection criteria. Handler teams were recruited from around the US and provided with devitalized SLF egg masses to use when training their dogs. The handlers were then evaluated with an odor recognition test, and a field test over a period of 3 – 6 months. Training and preparation for the evaluations were completed at the discretion of the enrolled handler teams, overseen by a local trainer. We evaluated the dogs' performance in two sequential experiments. We found that the community scientist dog teams were able to achieve a sensitivity of 81\% during controlled testing and 58\% during field trials. These results demonstrate a proof-of-concept; community scientist dog teams could play a significant part in protecting their local environments and agriculture from invasive species.
DOI: 10.5281/zenodo.13319723
title: Water Body Checklists 2019: Alboran Sea Species List

description: Species checklists created using effechecka and modified polygons from IHO. The polygons were reduced in resolution.List of species collected from the Alboran Sea using effechecka and a modified polygon from the International Hydrographic Association. A filter was applied (based on data from WoRMS) to remove all non-marine taxa.
DOI: 10.5281/zenodo.13319724
title: Water Body Checklists 2019: Alboran Sea Species List

description: Species checklists created using effechecka and modified polygons from IHO. The polygons were reduced in resolution.List of species collected from the Alboran Sea using effechecka and a modified polygon from the International Hydrographic Association. A filter was applied (based on data from WoRMS) to remove all non-marine taxa.
DOI: 10.5281/zenodo.13319727
title: Water Body Checklists 2019: Andaman Sea Species List

description: Species checklists created using effechecka and modified polygons from IHO. The polygons were reduced in resolution.List of species collected from the Andaman Sea using effechecka and a modified polygon from the International Hydrographic Association. A filter was applied (based on data from WoRMS) to remove all non-marine taxa.
DOI: 10.5281/zenodo.13319728
title: Water Body Checklists 2019: Andaman Sea Species List

description: Species checklists created using effechecka and modified polygons from IHO. The polygons were reduced in resolution.List of species collected from the Andaman Sea using effechecka and a modified polygon from the International Hydrographic Association. A filter was applied (based on data from WoRMS) to remove all non-marine taxa.
DOI: 10.5281/zenodo.13381012
title: WoRMS internal: World Register of Marine Species

description: The aim of a World Register of Marine Species (WoRMS) is to provide an authoritative and comprehensive list of names of marine organisms, including information on synonymy. WoRMS data published to EOL include taxon names and classification, images and Notes, and attribute data including Environment and Distribution.

http://www.marinespecies.org/
DOI: 10.5281/zenodo.13315800
title: Arctic Biodiversity: Arctic Arthropods

description: Biogeography and other attributes for Arctic organisms, various sources.Danks, H.V., 1981. Arctic arthropods: a review of systematics and ecology with particular reference to the North American fauna. Entomological Society of Canada.
DOI: 10.5281/zenodo.13315801
title: Arctic Biodiversity: Arctic Arthropods

description: Biogeography and other attributes for Arctic organisms, various sources.Danks, H.V., 1981. Arctic arthropods: a review of systematics and ecology with particular reference to the North American fauna. Entomological Society of Canada.
DOI: 10.6075/j0513zkp
title: UC San Diego 2021 Climate Justice and Action Rally. In Green New Deal at UC San Diego

description: This is a series of photos taken at the Climate Justice and Action Rally that shows the evolution of student demands for a Fossil-Fuel Free UC San Diego along with a poster advertising the event, a press release, and press coverage.
DOI: 10.5066/f7x928c3
title: Data Supporting Walrus Areas of Use in the Chukchi Sea During Sparse Sea Ice Cover

description: The dataset consists of geospatial files depicting the estimated June-to-November distribution of walrus foraging and occupancy during a four year period of sparse sea ice cover above the Chukchi Sea continental shelf (2008-2011). The walrus distribution and utilization estimates are based on location data from satellite-linked radio-tracked walruses in the Chukchi Sea (2008-2011). Compared to previous years this period was marked by earlier and more extensive sea ice retreat (June - September) and delayed sea ice freeze-up (October - November). This allowed walruses to arrive earlier, occupy slightly more northern areas, and stay later in the Chukchi Sea than previously. Data are combined for all four years and structured by month (June [06] - November [11]). Within each month, we estimated walrus utilization distributions by using an unweighted movement based kernel density estimator. The kernel density was then weighted by the amount of time walruses spent foraging during each recorded track segment. We present contours of the kernel density ranging from the 10th to 95th percentile.
DOI: 10.15468/dl.bb4c24
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Catoptrus iejima Fujita & Naruse, 2011",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000656-250213122211068/datasets/export for details.
DOI: 10.5281/zenodo.14867192
title: Supplementary data for Acropora cervicornis alternative splicing analysis

description: The repository holds supplementary data associated with alternative splicing analysis of the coral Acropora cervicornis.

 

The pre-print of the manuscript can be accessed at: https://www.biorxiv.org/content/10.1101/2025.01.21.634199v1 

 

File descriptions:

Supplementary Table 1: CBASS temperature profile log fileSupplementary Table 2: Count of uniquely mapped reads per sample per species (coral host and symbiont)Supplementary Table 3: PSI estimates of called events for all samples in the coral host and symbiontSupplementary Table 4: Significant differential AS events in the coral hostSupplementary Table 5: Enriched GO terms for significant differentially AS genes for each tested contrastSupplementary Table 6: Enriched GO terms for significant differentially expressed genes for each tested contrast
DOI: 10.5281/zenodo.14867193
title: Supplementary data for Acropora cervicornis alternative splicing analysis

description: The repository holds supplementary data associated with alternative splicing analysis of the coral Acropora cervicornis.

 

The pre-print of the manuscript can be accessed at: https://www.biorxiv.org/content/10.1101/2025.01.21.634199v1 

 

File descriptions:

Supplementary Table 1: CBASS temperature profile log fileSupplementary Table 2: Count of uniquely mapped reads per sample per species (coral host and symbiont)Supplementary Table 3: PSI estimates of called events for all samples in the coral host and symbiontSupplementary Table 4: Significant differential AS events in the coral hostSupplementary Table 5: Enriched GO terms for significant differentially AS genes for each tested contrastSupplementary Table 6: Enriched GO terms for significant differentially expressed genes for each tested contrast
DOI: 10.5281/zenodo.13316337
title: AnAge: AnAge text (40) DwCA

description: AnAge is a database of longevity and ageing in animals. It features quantitative life history data for over 4,000 species, including extensive longevity records, body masses at different developmental stages, reproductive data, and physiological traits related to metabolism. In addition to quantitative data, AnAge also features comments and observations related to ageing or relevant to the life history of individual taxa.

AnAge features a manually-curated collection of animal longevity records. Moreover, AnAge has extensive life-history traits such as adult body weight, gestation or incubation time, age at sexual maturity and other reproductive data. Lastly, observations on physiological or pathological changes with age in animals are (where available) featured. AnAge focuses primarily on chordates. At the time of writing, AnAge features 4,122 entries, including 1,331 mammals, 1,098 birds, 539 reptiles, 169 amphibians, 962 fishes and 28 non-chordates. Our focus is on accuracy and quality, however, not quantity, and only species for which we have confidence in the data are featured. Numerous experts have contributed information to AnAge and helped us meet quality standards. Professor Steven Austad, a world-renowned expert in mammalian ageing at the Barshop Institute in San Antonio, is AnAge__s expert mammalogist and curator.AnAge is a database of longevity and ageing in animals. It features quantitative life history data for over 4,000 species, including extensive longevity records, body masses at different developmental stages, reproductive data, and physiological traits related to metabolism. In addition to quantitative data, AnAge also features comments and observations related to ageing or relevant to the life history of individual taxa.

AnAge features a manually-curated collection of animal longevity records. Moreover, AnAge has extensive life-history traits such as adult body weight, gestation or incubation time, age at sexual maturity and other reproductive data. Lastly, observations on physiological or pathological changes with age in animals are (where available) featured. AnAge focuses primarily on chordates. At the time of writing, AnAge features 4,122 entries, including 1,331 mammals, 1,098 birds, 539 reptiles, 169 amphibians, 962 fishes and 28 non-chordates. Our focus is on accuracy and quality, however, not quantity, and only species for which we have confidence in the data are featured. Numerous experts have contributed information to AnAge and helped us meet quality standards. Professor Steven Austad, a world-renowned expert in mammalian ageing at the Barshop Institute in San Antonio, is AnAge__s expert mammalogist and curator.
DOI: 10.5281/zenodo.13316336
title: AnAge: AnAge text (40) DwCA

description: AnAge is a database of longevity and ageing in animals. It features quantitative life history data for over 4,000 species, including extensive longevity records, body masses at different developmental stages, reproductive data, and physiological traits related to metabolism. In addition to quantitative data, AnAge also features comments and observations related to ageing or relevant to the life history of individual taxa.

AnAge features a manually-curated collection of animal longevity records. Moreover, AnAge has extensive life-history traits such as adult body weight, gestation or incubation time, age at sexual maturity and other reproductive data. Lastly, observations on physiological or pathological changes with age in animals are (where available) featured. AnAge focuses primarily on chordates. At the time of writing, AnAge features 4,122 entries, including 1,331 mammals, 1,098 birds, 539 reptiles, 169 amphibians, 962 fishes and 28 non-chordates. Our focus is on accuracy and quality, however, not quantity, and only species for which we have confidence in the data are featured. Numerous experts have contributed information to AnAge and helped us meet quality standards. Professor Steven Austad, a world-renowned expert in mammalian ageing at the Barshop Institute in San Antonio, is AnAge__s expert mammalogist and curator.AnAge is a database of longevity and ageing in animals. It features quantitative life history data for over 4,000 species, including extensive longevity records, body masses at different developmental stages, reproductive data, and physiological traits related to metabolism. In addition to quantitative data, AnAge also features comments and observations related to ageing or relevant to the life history of individual taxa.

AnAge features a manually-curated collection of animal longevity records. Moreover, AnAge has extensive life-history traits such as adult body weight, gestation or incubation time, age at sexual maturity and other reproductive data. Lastly, observations on physiological or pathological changes with age in animals are (where available) featured. AnAge focuses primarily on chordates. At the time of writing, AnAge features 4,122 entries, including 1,331 mammals, 1,098 birds, 539 reptiles, 169 amphibians, 962 fishes and 28 non-chordates. Our focus is on accuracy and quality, however, not quantity, and only species for which we have confidence in the data are featured. Numerous experts have contributed information to AnAge and helped us meet quality standards. Professor Steven Austad, a world-renowned expert in mammalian ageing at the Barshop Institute in San Antonio, is AnAge__s expert mammalogist and curator.
DOI: 10.5281/zenodo.13319766
title: Water Body Checklists 2019: Banda Sea Species List

description: Species checklists created using effechecka and modified polygons from IHO. The polygons were reduced in resolution.List of species collected from the Banda Sea using effechecka and a modified polygon from the International Hydrographic Association. A filter was applied (based on data from WoRMS) to remove all non-marine taxa.
DOI: 10.5281/zenodo.13319767
title: Water Body Checklists 2019: Banda Sea Species List

description: Species checklists created using effechecka and modified polygons from IHO. The polygons were reduced in resolution.List of species collected from the Banda Sea using effechecka and a modified polygon from the International Hydrographic Association. A filter was applied (based on data from WoRMS) to remove all non-marine taxa.
DOI: 10.6075/j01836ws
title: UC San Diego 2023 Walkout for Climate. In Green New Deal at UC San Diego

description: This is a series of photos taken at the Walkout for Climate that shows continued student demands for a Fossil-Fuel Free UC San Diego along with a poster and graffiti artwork advertising the event, a press release, and press coverage.
DOI: 10.6075/j0736r8m
title: Green New Deal at UC San Diego

description: The Green New Deal at UC San Diego is a grassroots climate justice organization formed in 2019 to promote climate solutions and climate action on campus. It succeeded in changing institutional policies on a number of important fronts, both at the San Diego divisional level and systemwide. Notable institutional transformations include a shift from 'carbon neutrality' to 'fossil free' as the goal of the UC climate protection policy; decarbonization planning on all ten campuses; and a climate education requirement at UC San Diego. This collection consists of primary source documents and other media related to these campaigns. It includes material from two subsidiary collectivities: the UC San Diego Committee on Campus Climate Change, a standing committee of the divisional Academic Senate, founded shortly after the GND with the same goals, and the UC Green New Deal Coalition, the ten-campus organization, founded by members of the GND to pursue the same agenda systemwide. The purpose of assembling these materials is to create a historical record of the success of a grassroots political movement addressing one of the most urgent issues of our time.
DOI: 10.5281/zenodo.13322874
title: LifeDesks Archive: Diatom LifeDesk (77) DwCA

description: This is where EOL hosts source datasets (archives, dumps, etc.) from EOL content partners (especially partners without a web presence of their own).

This organization will also include the content partner utility files EOL connectors use to generate a particular content partner__s resource EOL archive or XML.

For questions or suggestions please visit the EOL Services forum at http://discuss.eol.org/c/eol-services
DOI: 10.5281/zenodo.13322873
title: LifeDesks Archive: Diatom LifeDesk (77) DwCA

description: This is where EOL hosts source datasets (archives, dumps, etc.) from EOL content partners (especially partners without a web presence of their own).

This organization will also include the content partner utility files EOL connectors use to generate a particular content partner__s resource EOL archive or XML.

For questions or suggestions please visit the EOL Services forum at http://discuss.eol.org/c/eol-services
DOI: 10.15468/dl.ec62xh
title: Occurrence Download

description: A dataset containing 542 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Brownea ariza Benth."
 ]
}

 The dataset includes 542 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000658-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5dqa2f
title: Occurrence Download

description: A dataset containing 69017 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alectoris rufa (Linnaeus, 1758), Anas acuta Linnaeus, 1758, Anas crecca Linnaeus, 1758, Anas platyrhynchos Linnaeus, 1758, Ardea cinerea Linnaeus, 1758, Arenaria interpres (Linnaeus, 1758), Asio otus (Linnaeus, 1758), Aythya fuligula (Linnaeus, 1758), Buteo buteo (Linnaeus, 1758), Calidris alba (Pallas, 1764), Carduelis carduelis (Linnaeus, 1758), Charadrius alexandrinus Linnaeus, 1758, Carduelis chloris (Linnaeus, 1758), Columba livia J.F.Gmelin, 1789, Columba palumbus azorica Hartert, 1905, Coturnix coturnix (Linnaeus, 1758), Egretta garzetta (Linnaeus, 1766), Erithacus rubecula (Linnaeus, 1758))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Material citation)"
 ]
 }
 },
 "Year is greater than or equal to 2019",
 "Year is less than or equal to 2024",
 "HasCoordinate is true",
 "Geometry POLYGON ((-31.5 40, -24.5 40, -24.5 36.5, -31.5 36.5, -31.5 40))"
 ]
}

 The dataset includes 69017 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000657-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pcb7d3
title: Occurrence Download

description: A dataset containing 6245815 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "GadmGid is USA.18_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 6245815 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000633-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7284/159814
title: Splitbeam Echosounder data collected during research cruise AR77 using a Kongsberg EK80 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.5281/zenodo.13319938
title: Water Body Checklists 2019: Molukka Sea Species List

description: Species checklists created using effechecka and modified polygons from IHO. The polygons were reduced in resolution.List of species collected from the Molukka Sea using effechecka and a modified polygon from the International Hydrographic Association. A filter was applied (based on data from WoRMS) to remove all non-marine taxa.
DOI: 10.5281/zenodo.13319939
title: Water Body Checklists 2019: Molukka Sea Species List

description: Species checklists created using effechecka and modified polygons from IHO. The polygons were reduced in resolution.List of species collected from the Molukka Sea using effechecka and a modified polygon from the International Hydrographic Association. A filter was applied (based on data from WoRMS) to remove all non-marine taxa.
DOI: 10.7284/159728
title: Splitbeam Echosounder data collected during research cruise AR80 using a Kongsberg EK80 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/161016
title: Speedlog data collected during research cruise AR83-A using a Furuno DS-60 instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/162597
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AR84-04 using a Hawaii UHDAS instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/162604
title: Flowmeter data collected during research cruise AR84-04 using a Thiel Thiel Flowmeter instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/162592
title: Fluorometer data collected during research cruise AR84-04 using a WETLabs WETStar instrument system onboard the platform RV Neil Armstrong

description: Original (unprocessed) data collected during a Field_expedition