cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7541672
title: Dataset: Comparative analysis of 1H NMR and 1H–13C HSQC NMR metabolomics to understand the effects of medium composition in yeast growth

description: NMR datasets used in https://doi.org/10.1021/acs.analchem.8b01196. In the corresponding study, we have performed a comparative chemometric analysis between untargeted <sup>1</sup>H NMR and <sup>1</sup>H-<sup>13</sup>C HSQC NMR analyses of metabolomics samples from <em>Saccharomyces cerevisiae</em> (yeast) extracts. Specifically, yeast was grown in two different liquid media and their metabolism was characterized at 8 different time-points of a 3-day period. The two media used, YPD (Yeast Peptone Dextrose) and YSC (Yeast nitrogen base Synthetic Complete), are broadly used in yeast lab routines, and results from this analysis should be of interest for improving lab methodologies involving yeast.
DOI: 10.5281/zenodo.7541671
title: Dataset: Comparative analysis of 1H NMR and 1H–13C HSQC NMR metabolomics to understand the effects of medium composition in yeast growth

description: NMR datasets used in https://doi.org/10.1021/acs.analchem.8b01196. In the corresponding study, we have performed a comparative chemometric analysis between untargeted <sup>1</sup>H NMR and <sup>1</sup>H-<sup>13</sup>C HSQC NMR analyses of metabolomics samples from <em>Saccharomyces cerevisiae</em> (yeast) extracts. Specifically, yeast was grown in two different liquid media and their metabolism was characterized at 8 different time-points of a 3-day period. The two media used, YPD (Yeast Peptone Dextrose) and YSC (Yeast nitrogen base Synthetic Complete), are broadly used in yeast lab routines, and results from this analysis should be of interest for improving lab methodologies involving yeast.
DOI: 10.6073/pasta/f6b2860e3a1244fb16f3124e21e2c9dd
title: CBS02 Nests of Grasshopper Sparrows on Konza Prairie

description: This data set contains data describing Grasshopper Sparrow nests. These nests were primarily found by rope dragging but also on surveys (see RI Survey Data Set), flushing birds during other activities, and via behavioral observations. We described nest contents and monitored nest fate via visits every 2-3 day and by placing an iButton placed in the center of the nest flush with the bottom of the nest cup and comparing temperature traces to a second iButton placed outside of the nest to determine the timing of nest failure and other metrics of incubation/brooding behavior. We compiled counts of partial egg loss, partial brood loss, and estimated causes of nest failure, comparing the timing of these events with KNZ-collected meteorological data to determine the temporal association between rainstorms and nest abandonment.
DOI: 10.6073/pasta/de4e3c4cb777f18fa1b1d83c8eea19cc
title: CBS03 Grasshopper sparrow surveys: densities, reproductive index, and locations of marked individuals on Konza Prairie

description: Data on the location, identity, and reproductive index (Vickery, 1992 #5253) of Grasshopper Sparrows within 10-ha plots on 14 watersheds units on Konza and on 2 adjoining units on the Rannells Preserve. Each plot was surveyed every ~7-10 days. These surveys documented individual sparrow locations, and are used to calculate dispersal distances and territory densities.
DOI: 10.6073/pasta/2cde467bd7a7782c135abb637a25c407
title: CBS04 Sweep sample data: prey estimates for Grasshopper Sparrows on Konza Prairie

description: This data set includes data on the contents of sweep samples. We collected sweeps in 2014 monthly in May, June, and July in 3 locations on each of the focal watersheds. Sweeps were X m long and centered at veg points. Data consist of information about the sampling events, and sample wet mass, edible mass (combined mass of selected orders listed below). Additionally, the dataset includes the number of individuals in each of a series of size categories, total N, and mass (in grams) of the following groups: Tettigoniidae, Acrididae, other Orthoptera, Gryllidae, Odonata, Ephemeroptera, Coleoptera, Hymenoptera, Lepidoptera, Arachnida, Hemiptera, Neuroptera, Diptera, Phasmatidae, Mantidae, and “other”.
DOI: 10.6073/pasta/70d8e14ba395700555a4aa531b95aae8
title: CBS05 Estimates of vegetation structure and composition collected on Konza Prairie watersheds and on the nearby Rannell’s Preserve

description: Data set includes estimates of vegetation structure and composition collected during monthly sampling events on Konza Prairie watersheds and on the nearby Rannell’s Preserve. Vegetation data were collected from three randomly-selected locations were chosen randomly on each watershed; two from outside the 10-ha plot (see project abstract) and one inside the plot. We sampled vegetation on each watershed once a month, during May, June, and July. Additional vegetation data were collected from Grasshopper Sparrow nest sites within ~3 days of nests failing. We used 5 sets of Daubenmire frame measures to determine percent cover of major plant functional groups (at the center of the plot and 5 m from center at the 4 cardinal directions). We estimated visual obstruction by placing a Robel Pole in the middle, and 5 m from the middle of the plot in each of the 4 cardinal directions. For each pole placement, we stood 4 m away with eye 1 m above the ground in each of 4 directions, and counting the highest 5-cm segment not completely obscured by vegetation. At nests, we also estimated the slope and aspect in the center of each plot.
DOI: 10.6073/pasta/6c39bc3e4414f415862d30ef160351dd
title: CFC01 Kings Creek long-term fish and crayfish community sampling at Konza Prairie

description: Prairie stream fish communities have been monitored seasonally at multiple sites within the Kings Creek watershed since 1995. The objective of this sampling is to evaluate how these communities respond to seasonal and annual variation in environmental conditions. Specifically, we are interesting in testing the resistance and resilience of stream communities in response to flood and drought disturbances. One site in a downstream perennial reach of the watershed has been sampled since 1995. Five sites have been sampled in smaller tributaries in the watershed, two were discontinued due to often lack of flow, two have been sampled since 1995 and one was added in 2008. Sampling is conducted with backpack electrofishing with at least one person dip netting. At each site, multiple habitats (pools and riffles) are sampled. Length of all fish and crayfish are measured.
DOI: 10.5281/zenodo.7541766
title: Dataset: 1H NMR metabolomic study of auxotrophic starvation in yeast using Multivariate Curve Resolution-Alternating Least Squares for Pathway Analysis

description: This dataset contains the set of 1H NMR data used in https://doi.org/10.1038/srep30982. Yeast was grown in five different liquid media and their metabolism was characterized at 6 different time-points during 24 h. The media used were YSC (Yeast nitrogen base Synthetic Complete) and four Drop-Out (DM) medium that do not contain one of the following nutrients (L-histidine, L-leucine, L-methionine and uracil). Since the used yeast strain does not encode in its genome some genes relative to the biosynthesis of these four nutrients, some gene de-regulations process will occur, detectable at the metabolome level. In this study, we have characterized the metabolome using <sup>1</sup>H NMR spectroscopy, detecting more than 40 metabolites, and the evolution of this metabolome along the measured time-points was described by application of PCA, ASCA and MCR-ALS chemometric methods.
DOI: 10.5281/zenodo.7541765
title: Dataset: 1H NMR metabolomic study of auxotrophic starvation in yeast using Multivariate Curve Resolution-Alternating Least Squares for Pathway Analysis

description: This dataset contains the set of 1H NMR data used in https://doi.org/10.1038/srep30982. Yeast was grown in five different liquid media and their metabolism was characterized at 6 different time-points during 24 h. The media used were YSC (Yeast nitrogen base Synthetic Complete) and four Drop-Out (DM) medium that do not contain one of the following nutrients (L-histidine, L-leucine, L-methionine and uracil). Since the used yeast strain does not encode in its genome some genes relative to the biosynthesis of these four nutrients, some gene de-regulations process will occur, detectable at the metabolome level. In this study, we have characterized the metabolome using <sup>1</sup>H NMR spectroscopy, detecting more than 40 metabolites, and the evolution of this metabolome along the measured time-points was described by application of PCA, ASCA and MCR-ALS chemometric methods.
DOI: 10.6084/m9.figshare.21347031.v1
title: Configuration 1 Testing Data

description: Data of pre-course and course testing (clinical knowledge and clinical reasoning skills) related to scenarios in configuration 1
DOI: 10.6073/pasta/a60640bbfe6860a5c7b349e06e8363c2
title: CFP01 Fish population on selected watersheds at Konza Prairie

description: Fishes were collected by habitat (pool or riffle) at 6 sites in the Kings Creek watershed with a single-pass electrofishing survey with one person operating the electrofisher and two people dipnetting. Collections were made seasonally.
DOI: 10.6084/m9.figshare.21347046.v1
title: Configuration Testing Data 2

description: Data of pre-course and course testing (clinical knowledge and clinical reasoning skills) related to scenarios in configuration 2
DOI: 10.6084/m9.figshare.21347031
title: Testing Data - Declarative Clinical Knowledge

description: Data of declarative clinical knowledge in pre-course and course testing
DOI: 10.6084/m9.figshare.21347031.v3
title: Testing Data - Declarative Clinical Knowledge

description: Data of declarative clinical knowledge in pre-course and course testing
DOI: 10.6084/m9.figshare.21347031.v2
title: Testing Data - Declarative Knowledge

description: Data of declarative clinical knowledge in pre-course and course testing
DOI: 10.6084/m9.figshare.21347046
title: Testing Data - Conceptual Clinical Knowledge

description: Data of conceptual clinical knowledge in pre-course and course testing
DOI: 10.6084/m9.figshare.21347046.v3
title: Testing Data - Conceptual Clinical Knowledge

description: Data of conceptual clinical knowledge in pre-course and course testing
DOI: 10.6084/m9.figshare.21347046.v2
title: Testing Data - Conceptual Knowledge

description: Data of conceptual clinical knowledge in pre-course and course testing
DOI: 10.6084/m9.figshare.21905220
title: Testing Data - Clinical Reasoning Skills

description: Data of clinical reasoning skills course testing
DOI: 10.6084/m9.figshare.21905220.v1
title: Testing Data - Clinical Reasoning Skills

description: Data of clinical reasoning skills course testing
DOI: 10.5519/qd.cktwug8o
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (508 records)
DOI: 10.6084/m9.figshare.21905226
title: Student Perception Data - Satisfaction & Self-confidence

description: Data of students' perception of satisfaction and self-confidence in learning with simulations.
DOI: 10.6084/m9.figshare.21905232
title: Student Perception Data - Simulation Design

description: Data of students' perception of the simulation design
DOI: 10.6084/m9.figshare.21905232.v1
title: Student Perception Data - Simulation Design

description: Data of students' perception of the simulation design
DOI: 10.5517/ccdc.csd.cc2ckmf0
title: CCDC 2191682: Experimental Crystal Structure Determination

description: Related Article: Dehao Duan, Fangyuan Cai, Yi Wu, Quan Gong, Aiqiong Huang, Dongcheng Yi, Yinbao Li, Yingzhen Lai, Xiang-Jun Peng|2022|Tetrahedron|131|133229|doi:10.1016/j.tet.2022.133229
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ckmg1
title: CCDC 2191683: Experimental Crystal Structure Determination

description: Related Article: Dehao Duan, Fangyuan Cai, Yi Wu, Quan Gong, Aiqiong Huang, Dongcheng Yi, Yinbao Li, Yingzhen Lai, Xiang-Jun Peng|2022|Tetrahedron|131|133229|doi:10.1016/j.tet.2022.133229
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cmqj8
title: CCDC 2193700: Experimental Crystal Structure Determination

description: Related Article: Dong-Liu Lu, Yi-Yun Yao, Yu-Feng Liang, Cui Liang, Lu Lei, Lu Ma, Dong-Liang Mo|2022|J.Org.Chem.|88|690|doi:10.1021/acs.joc.2c02140
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cpq2w
title: CCDC 2195608: Experimental Crystal Structure Determination

description: Related Article: Sayan Pramanik, Pinaki Saha, Prasanta Ghosh, Chhanda Mukhopadhyay|2022|Tetrahedron|131|133202|doi:10.1016/j.tet.2022.133202
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cpq3x
title: CCDC 2195609: Experimental Crystal Structure Determination

description: Related Article: Sayan Pramanik, Pinaki Saha, Prasanta Ghosh, Chhanda Mukhopadhyay|2022|Tetrahedron|131|133202|doi:10.1016/j.tet.2022.133202
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cyk63
title: CCDC 2203145: Experimental Crystal Structure Determination

description: Related Article: Hui Huang, Yiru Pu, Dikai Zhu, Chaozheng Zhang, Jirui Yang, Changqun Liu, Xin Zhang, Feiyan Tao, Mei-Mei Li, Jun Lu|2022|Tetrahedron|131|133203|doi:10.1016/j.tet.2022.133203
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d0d0v
title: CCDC 2204906: Experimental Crystal Structure Determination

description: Related Article: Ratchanaporn Chokchaisiri, Suphakit Chantorn, Wachirachai Pabuprapap, Waraluck Chaichompoo, Bunlawee Yotnoi, Sareeya Bureekaew, Lucksagoon Ganranoo, Apichart Suksamrarn|2022|Tetrahedron|131|133232|doi:10.1016/j.tet.2022.133232
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d0k77
title: CCDC 2205068: Experimental Crystal Structure Determination

description: Related Article: Balendra, Sanyukta, Mahboob Ali, Sevi Murugavel|2023|Inorg.Chem.Commun.|148|110280|doi:10.1016/j.inoche.2022.110280
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d0k88
title: CCDC 2205069: Experimental Crystal Structure Determination

description: Related Article: Balendra, Sanyukta, Mahboob Ali, Sevi Murugavel|2023|Inorg.Chem.Commun.|148|110280|doi:10.1016/j.inoche.2022.110280
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d5nkt
title: CCDC 2209976: Experimental Crystal Structure Determination

description: Related Article: Marco Meyer, Alessandro Prescimone, Edwin C. Constable, Catherine E. Housecroft|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d5t4k
title: CCDC 2210118: Experimental Crystal Structure Determination

description: Related Article: Faizan  Ahmad|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d65d6
title: CCDC 2210467: Experimental Crystal Structure Determination

description: Related Article: xiaoxin Xie|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d67d8
title: CCDC 2210529: Experimental Crystal Structure Determination

description: Related Article: Ping Lu|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d6d12
title: CCDC 2210673: Experimental Crystal Structure Determination

description: Related Article: George Bartholomew, Filippo Carpaneto, Richmond Sarpong|2022|CSD Communication|||
description: Related Article: G. Logan Bartholomew, Filippo Carpaneto, Richmond Sarpong|2022|J.Am.Chem.Soc.|144|22309|doi:10.1021/jacs.2c10746
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.6521827
title: Sibyl Datasets

description: This upload includes the three datasets used in the experimental evaluation of the algorithm selector Sibyl for the submission "Sibyl: Improving Software Engineering Tools with SMT Selection".
DOI: 10.5281/zenodo.7065631
title: Sibyl Datasets

description: This upload includes the three datasets used in the experimental evaluation of the algorithm selector Sibyl for the submission "Sibyl: Improving Software Engineering Tools with SMT Selection". We also include the pre-comupted graphs
DOI: 10.5281/zenodo.7541808
title: Sibyl Datasets

description: This upload includes the three datasets used in the experimental evaluation of the algorithm selector Sibyl for the submission "Sibyl: Improving Software Engineering Tools with SMT Selection". We also include the pre-comupted graphs
DOI: 10.17864/1947.000424
title: Inter-rater reliability of functional MRI data quality control assessments dataset

description: This dataset contains rating information from four raters who reviewed the quality of functional magnetic resonance imaging (fMRI) datasets. These data were task-based and resting state fMRI data that were included in part of the fMRI Open QC Project [1], which aimed to showcase examples of QC practices across institutions and to foster discussions within the field. Raters made quality control decisions based on output generated by the python package, pyfMRIqc [2], which generates user friendly reports to aid decision making on the quality of fMRI data. Raters classified data using one of the three following criteria: Include, Uncertain, Exclude, based on guidance provided by a protocol included in the publication. Raters also provided notes describing their decision making for uncertain or exclude cases. A summary of the majority decision of all four raters is also included in this dataset for each subject. The reports generated by pyfMRIqc can be found externally on GitHub [3].
DOI: 10.6073/pasta/84a6238e21104f367115fc693584865a
title: CGP01 Gall-insect densities on selected plant species in watersheds with different fire frequencies

description: Long-term monitoring of gall-insect densities on Solidago canadensis, Vernonia baldwinii, and Ceanothus herbaceous. Gall abundances are censused in watersheds burned at one- to twenty- year intervals to asses the role of fire frequency and time since fire on gall-insect population dynamics. The data sets contain the following: Watershed fire frequency, number of growing seasons since last fire, plant species, number of galled stems, and number of censused stems. Censuses conducted for the 1989-1996 growing seasons except 1992 and 1994, next scheduled census is fall 1997.
DOI: 10.6073/pasta/a78eec11ecc68e190151880895e8fd2c
title: CGR01 Sweep sampling of Grasshoppers on Konza Prairie LTER watersheds in 1981 only

description: Sweep samples for estimating grasshopper (Acrididae) composition and relative abundance at one site for each of 12 Konza Prairie LTER fire/grazing/soil treatment combinations (3 fire treatments x 2 soils x 2 grazing treatments). Samples were collected in June, August, and September. At each site on each occasion, 18 sets of 10 sweeps each (180 sweeps total) were taken. Stored data include for each site on each occasion: total number of each species (all instars combined) collected and total number for each instar for each species (180 sweeps combined).