cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12859838
title: Syntaxonomical revision of the <i>Triseto flavescentis-Polygonion bistortae</i> alliance in the Carpathians

description: This phytosociological study of the Carpathian species-rich mesophilous mountain hay meadows (<i>Triseto flavescentis-Polygonion bistortae</i> alliance, <i>Molinio-Arrhenatheretea</i> class) presents the first unified large-scale classification system in four countries: Slovakia, Poland, Romania and Ukraine. The starting dataset contained relevés of the <i>Molinio-Arrhenatheretea</i>, <i>Mulgedio-Aconitetea</i> and <i>Nardetea strictae</i> classes. Numerical classification and semi-supervised classification by K-means method were used for the analyses. An electronic expert system and diagnostic species for grassland vegetation served for identification of <i>a priori</i> groups in K-means method. The final dataset contained 612 relevés. Altitude, climatic data and Ellenberg indicator values were used for ecological differentiation of syntaxa. The main gradients in floristic composition were analysed by Detrended Correspondence Analysis. Finally, the eight well-differentiated associations and one newly described association were determined: <i>Campanulo glomeratae-Geranietum sylvatici</i>, <i>Geranio sylvatici-Trisetetum flavescentis</i>, <i>Crepido mollis-Agrostietum capillaris</i>, <i>Geranio-Alchemilletum crinitae</i>, <i>Alchemillo-Deschampsietum caespitosae</i>, <i>Phyteumo (orbicularis)-Trifolietum pratensis</i>, <i>Astrantio-Trisetetum flavescentis</i>, <i>Trollio altissimi-Knautietum dipsacifoliae</i> and <i>Violo declinatae-Agrostietum capillaris</i> ass. nova. The differences in vegetation diversity of mountain hay meadows between particular countries were confirmed: <i>Alchemillo-Deschampsietum caespitosae</i> occurs in all studied territories, <i>Campanulo glomeratae-Geranietum sylvatici</i> occurs predominantly in Slovakia and the newly described association <i>Violo declinatae-Agrostietum capillaris</i> ass. nova could be found only in Ukraine.
DOI: 10.6084/m9.figshare.12091074.v1
title: Mitochondrial genome SNPs analysis of eight barley genotypes displaying hot spot regions, phylogenetic relationships and heteroplasmy

description: Organellar genomes are small, circular entities that provide unique advantages as compared to the nuclear genome. The present study was aimed at evaluating the efficiency of utilizing mitochondrial single nucleotide polymorphisms (SNPs) approach in separating barley cultivars. Sequences generated via next-generation sequencing were further utilized to confirm the incidence of heteroplasmy in barley mitochondrial genome. The analysis involved seven cultivated barley (<i>Hordeum vulgare</i> subsp. <i>vulgare</i>) (VG) and one wild (<i>H. vulgare</i> subsp. <i>spontaneum</i>) (SP) genotypes. A total of 73 million paired-end reads per mitochondrial genomes across the eight barley genotypes were generated using Illumina HiSeq 2000 platform. Sequences of each genotype were separately aligned to the published barley mitochondrial reference genome, thus SNPs were detected. The overall results indicated the efficiency of using mitochondrial SNPs as a molecular marker in distinguishing among barley genotypes. Unique SNPs were determined in six out of the eight genotypes, where Giza131 and Giza129 had no specific mitochondrial SNPs, while Giza130 showed the largest number of unique mitochondrial SNPs. The phylogenetic tree indicated the close relationship between Giza129 and Giza130. Interestingly, SP was not clearly discriminated among genotypes.
DOI: 10.6084/m9.figshare.12091074
title: Mitochondrial genome SNPs analysis of eight barley genotypes displaying hot spot regions, phylogenetic relationships and heteroplasmy

description: Organellar genomes are small, circular entities that provide unique advantages as compared to the nuclear genome. The present study was aimed at evaluating the efficiency of utilizing mitochondrial single nucleotide polymorphisms (SNPs) approach in separating barley cultivars. Sequences generated via next-generation sequencing were further utilized to confirm the incidence of heteroplasmy in barley mitochondrial genome. The analysis involved seven cultivated barley (<i>Hordeum vulgare</i> subsp. <i>vulgare</i>) (VG) and one wild (<i>H. vulgare</i> subsp. <i>spontaneum</i>) (SP) genotypes. A total of 73 million paired-end reads per mitochondrial genomes across the eight barley genotypes were generated using Illumina HiSeq 2000 platform. Sequences of each genotype were separately aligned to the published barley mitochondrial reference genome, thus SNPs were detected. The overall results indicated the efficiency of using mitochondrial SNPs as a molecular marker in distinguishing among barley genotypes. Unique SNPs were determined in six out of the eight genotypes, where Giza131 and Giza129 had no specific mitochondrial SNPs, while Giza130 showed the largest number of unique mitochondrial SNPs. The phylogenetic tree indicated the close relationship between Giza129 and Giza130. Interestingly, SP was not clearly discriminated among genotypes.
DOI: 10.21258/1638747
title: Inventario forestale nazionale svizzero - Tabella n. 898870
DOI: 10.21258/1651403
title: Inventario forestale nazionale svizzero - Tabella n. 898869
DOI: 10.21258/1663261
title: Inventario forestale nazionale svizzero - Tabella n. 897451
DOI: 10.21258/1630865
title: Inventario forestale nazionale svizzero - Tabella n. 897497
DOI: 10.5281/zenodo.4335410
title: Genome assembly of Fusarium oxysporum f.sp. sesami

description: Here we summarized the scripts used for the genome assembly of the sesame wilt disease pathogen (<em>Fusarium oxysporum f.sp. sesami</em>).
DOI: 10.5281/zenodo.4271593
title: Genome assembly of Fusarium oxysporum f.sp. sesami

description: Here we summarized the scripts used for the genome assembly of the sesame wilt disease pathogen (<em>Fusarium oxysporum f.sp. sesami</em>).
DOI: 10.21258/1652529
title: Inventario forestale nazionale svizzero - Tabella n. 897365
DOI: 10.6084/m9.figshare.13398686
title: Data participation report member Crossref

description: file ini berisi rekap data cakupan metada anggota Crossref yang diambil dari situs Participation report member Crossref<br>
DOI: 10.21258/1629379
title: Inventario forestale nazionale svizzero - Tabella n. 896961
DOI: 10.6084/m9.figshare.13398686.v1
title: Data participation report member Crossref

description: file ini berisi rekap data cakupan metada anggota Crossref yang diambil dari situs Participation report member Crossref<br>
DOI: 10.21258/1669948
title: Inventario forestale nazionale svizzero - Tabella n. 891693
DOI: 10.21258/1657744
title: Inventario forestale nazionale svizzero - Tabella n. 897109
DOI: 10.21258/1649897
title: Inventario forestale nazionale svizzero - Tabella n. 899656
DOI: 10.25646/7758
title: Tagesdaten-CSV aus dem DIVI-Intensivregister

description: Die Tagesdaten-CSV entspricht einem Auszug der Daten des DIVI-Intensivregisters. Die Datei enthält eine Aggregation der aktuellsten Meldungen pro Landkreis. Es werden die aktuell gemeldeten Anzahlen der COVID-19 Intensivfälle sowie die gemeldeten intensivmedizinischen Behandlungskapazitäten angezeigt. Die Tagesdaten-CSV liefert dabei ausschließlich einen Blick auf die Daten gemäß dem Stand des betrachteten Tages. Die Daten sind im situationsbedingten Kontext aufbereitet, damit sind verschiedene Tagesdaten-CSVs u.U. nicht direkt miteinander vergleichbar. Die aktuellsten Meldungen werden im gewählten Betrachtungszeitfenster über alle Meldebereiche und Standorte aufsummiert. Weitere Informationen sind zu finden unter https://www.intensivregister.de/#/faq
DOI: 10.5281/zenodo.4335632
title: Supplementary Dataset for "Clumped isotope geochemistry of island carbonates in the South China Sea: Implications for early diagenesis and dolomitization"

description: This supplementary dataset contains raw geochemical data used to generate figures in the article "Clumped isotope geochemistry of island carbonates in the South China Sea: Implications for early diagenesis and dolomitization" by Guo et al.
DOI: 10.5517/ccdc.csd.cc238dxq
title: CCDC 1944503: Experimental Crystal Structure Determination

description: Related Article: Sunanda Dey, Suvendu Maity, Rakesh Purkait, Kunal Pal, Prasanta Ghosh, Kuladip Jana, Chittaranjan Sinha|2020|Analytical Methods|12|5485|doi:10.1039/D0AY01090A
description: Related Article: Sunanda Dey, Suvendu Maity, Rakesh Purkait, Kunal Pal, Prasanta Ghosh, Kuladip Jana, Chittaranjan Sinha|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc238f72
title: CCDC 1944513: Experimental Crystal Structure Determination

description: Related Article: Sunanda Dey, Suvendu Maity, Rakesh Purkait, Kunal Pal, Prasanta Ghosh, Kuladip Jana, Chittaranjan Sinha|2020|Analytical Methods|12|5485|doi:10.1039/D0AY01090A
description: Related Article: Sunanda Dey, Suvendu Maity, Rakesh Purkait, Kunal Pal, Prasanta Ghosh, Kuladip Jana, Chittaranjan Sinha|2020|CSD Communication|||
DOI: 10.5883/ds-zylep
title: Molecular data support the Atelurinae and Coletiinae as sister groups: a second Lepidospora (Brinckina) species (Zygentoma: Nicoletiidae: Coletiniinae) from the Pilbara

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/ds-vgds18
title: Balleriodes, a new monotypic paleoendemic genus of pill scarabs (Coleoptera: Hybosoridae: Ceratocanthinae) from the relict Udzungwa forest, Tanzania, and a new clade Synarmostes group shed light on the subfamily biogeographic pattern

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/ds-daccoi
title: DNA barcodes and reliable molecular identifications in a diverse group of invasive pests: lessons from Bactrocera fruit flies on variation across the COI gene, introgression, and standardization

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/ds-lepnelva
title: Identity of some recently described Lepidoptera from France reassessed with DNA barcodes

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/ds-zamareti
title: The Geometridae of Ethiopia III: genus Zamarada (Lepidoptera: Geometridae, Ennominae, Cassymini).

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/ds-minoa
title: Minoa lutea Schwingenschuss, 1954 (Lepidoptera: Geometridae: Larentiinae) recognized as bona species

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/ds-giuris
title: Giuris (Teleostei: Eleotridae) from Indonesia, with description of a new species

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/ds-apopl
title: Distribution pattern of the brackish Apocorophium lacustre (Vanhoffen, 1911) (Amphipoda: Corophiidae) and the structure of the amphipod assemblages in the upper Oder River catchment

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/ds-phaedusa
title: Evolution of reproductive strategies in the species rich land snail subfamily Phaedusinae (Stylommatophora: Clausiliidae)

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5281/zenodo.4335023
title: TRACMASS trajectories in the Southern Ocean

description: Data set of trajectories that are runned with the Lagrangian trajectory code TRACMASS v7.0.0 using data from an EC-Earth run performed following the guidelines of CMIP5. The data are stored according to the output from TRACMASS. NEMO_ORCA1_trajectories_back_Drake_ini.csv - Contains the initial position of trajectories that are started in the Drake Passage and runned backward to either the Drake Passage again or to 2 degree Celcius. NEMO_ORCA1_trajectories_back_Drake_out.csv - The end position of the trajectories that are started in the Drake Passage and runned backward until they reach the Drake Passage again or 2 degree Celcius. NEMO_ORCA1_trajectories_back_Drake_run.csv - The whole trajectories that are started in the Drake Passage and runned backward until they reach the Drake Passage again or 2 degree Celcius. NEMO_ORCA1_trajectories_Drake_ini.csv - Contains the initial position of trajectories that are started in the Drake Passage and runned forward to either the Drake Passage again or to 25 degree Celcius. NEMO_ORCA1_trajectories_Drake_out.csv - The end position of the trajectories that are started in the Drake Passage and runned forward until they reach the Drake Passage again or 25 degree Celcius. NEMO_ORCA1_trajectories_Drake_run.csv - The whole trajectories that are started in the Drake Passage and runned forward until they reach the Drake Passage again or 25 degree Celcius.
DOI: 10.5281/zenodo.4335022
title: TRACMASS trajectories in the Southern Ocean

description: Data set of trajectories that are runned with the Lagrangian trajectory code TRACMASS v7.0.0 using data from an EC-Earth run performed following the guidelines of CMIP5. The data are stored according to the output from TRACMASS. NEMO_ORCA1_trajectories_back_Drake_ini.csv - Contains the initial position of trajectories that are started in the Drake Passage and runned backward to either the Drake Passage again or to 2 degree Celcius. NEMO_ORCA1_trajectories_back_Drake_out.csv - The end position of the trajectories that are started in the Drake Passage and runned backward until they reach the Drake Passage again or 2 degree Celcius. NEMO_ORCA1_trajectories_back_Drake_run.csv - The whole trajectories that are started in the Drake Passage and runned backward until they reach the Drake Passage again or 2 degree Celcius. NEMO_ORCA1_trajectories_Drake_ini.csv - Contains the initial position of trajectories that are started in the Drake Passage and runned forward to either the Drake Passage again or to 25 degree Celcius. NEMO_ORCA1_trajectories_Drake_out.csv - The end position of the trajectories that are started in the Drake Passage and runned forward until they reach the Drake Passage again or 25 degree Celcius. NEMO_ORCA1_trajectories_Drake_run.csv - The whole trajectories that are started in the Drake Passage and runned forward until they reach the Drake Passage again or 25 degree Celcius.
DOI: 10.6084/m9.figshare.12934820
title: Raw_Data_Antileishmanial activity of fullerol and its liposomal formulation in experimental models of visceral leishmaniasis.xlsx

description: Visceral leishmaniasis (VL) is a systemic parasitic disease that leads to high rates of morbidity and mortality in humans worldwide. There is a great need to develop new drugs and novel strategies to make chemotherapy for this disease more efficacious and well tolerated. Recent reports on the immunomodulatory effects and the low toxicity of the spherical carbon nanostructure fullerol led us to investigate <i>in vitro</i> and in <i>vivo</i> its antileishmanial activity in free and encapsulated forms in liposomes. When assayed against intramacrophagic <i>Leishmania</i> amastigotes, fullerol showed a dose-dependent reduction of the infection index with IC<sub>50</sub> of 0.042 mg/mL. When given daily by i.p. route for 20 days (0.05 mg/kg/d) in a murine model of acute VL, fullerol promoted significant reduction in the liver parasite load. When evaluated under the liposomal form at 0.05 and 0.2 mg/kg with 4-days intervals, it was more effective than the free form, with significant parasite reductions in both liver and spleen. Liposomal fullerol at 0.2 mg/kg promoted the complete parasite elimination in the liver and significant increase in levels of pro-inflammatory TNF-α and IFN-g. The antileishmanial activity of the liposomal fullerol was further confirmed in a chronic model of VL. In conclusion, this work reports for the first time the antileishmanial activity of fullerol and introduces an innovative approach for treatment of VL based on the association of this nanostructure with liposomes.
DOI: 10.6084/m9.figshare.12934820.v1
title: Raw_Data_Antileishmanial activity of fullerol and its liposomal formulation in experimental models of visceral leishmaniasis.xlsx

description: Visceral leishmaniasis (VL) is a systemic parasitic disease that leads to high rates of morbidity and mortality in humans worldwide. There is a great need to develop new drugs and novel strategies to make chemotherapy for this disease more efficacious and well tolerated. Recent reports on the immunomodulatory effects and the low toxicity of the spherical carbon nanostructure fullerol led us to investigate <i>in vitro</i> and in <i>vivo</i> its antileishmanial activity in free and encapsulated forms in liposomes. When assayed against intramacrophagic <i>Leishmania</i> amastigotes, fullerol showed a dose-dependent reduction of the infection index with IC<sub>50</sub> of 0.042 mg/mL. When given daily by i.p. route for 20 days (0.05 mg/kg/d) in a murine model of acute VL, fullerol promoted significant reduction in the liver parasite load. When evaluated under the liposomal form at 0.05 and 0.2 mg/kg with 4-days intervals, it was more effective than the free form, with significant parasite reductions in both liver and spleen. Liposomal fullerol at 0.2 mg/kg promoted the complete parasite elimination in the liver and significant increase in levels of pro-inflammatory TNF-α and IFN-g. The antileishmanial activity of the liposomal fullerol was further confirmed in a chronic model of VL. In conclusion, this work reports for the first time the antileishmanial activity of fullerol and introduces an innovative approach for treatment of VL based on the association of this nanostructure with liposomes.
DOI: 10.5523/bris.27qu5twt57gu62m9dpk4ntcrfs
title: Data from Steiner et al. 2021. Exceptionally preserved early Cambrian bilaterian developmental stages from Mongolia. Nature Communications

description: The data accompanies the paper: Michael Steiner, Ben Yang, Simon Hohl, Da Li, Philip Donoghue. 2021. Exceptionally preserved early Cambrian bilaterian developmental stages from Mongolia. Nature Communications.
DOI: 10.21258/1657905
title: Inventario forestale nazionale svizzero - Tabella n. 891968
DOI: 10.5281/zenodo.4333054
title: Reactome

description: The Reactome dataset originates from the website https://reactome.org/ where it can be downloaded as Neo4j graph. This graph has been subsequently imported to Neo4j and in turn exported as RDF dump file in Turtle format which is now hosted on this site. The dataset is not yet RDFS-entailed and it utilizes the "http://dev.neo4j.owl.de/" base URI instead of "http://reacome.org/".
DOI: 10.1184/r1/13281518
title: Simulation files for current field computation in layer-homogeneous media, applied to skull-transparent currents

description: Simulation files used in paper "Effect of skull thickness and conductivity on current propagation for noninvasively injected currents" (M Forssell, C Goswami, A Krishnan, M Chamanzar, and P Grover)<br><br>
DOI: 10.1184/r1/13281518.v1
title: Simulation files for current field computation in layer-homogeneous media, applied to skull-transparent currents

description: Simulation files used in paper "Effect of skull thickness and conductivity on current propagation for noninvasively injected currents" (M Forssell, C Goswami, A Krishnan, M Chamanzar, and P Grover)<br><br>
DOI: 10.6084/m9.figshare.13399040
title: Supplementary Material for: Stress Management during the Intracytoplasmic Sperm Injection Cycle May Slow Down First Embryo Cleavage and Accelerate Embryo Compaction: A Pilot Randomized Controlled Trial

description: <b><i>Introduction:</i></b> A firm consensus on the effectiveness of psychological interventions during infertility treatment has not been reached yet in terms of mental health and pregnancy rates. Moreover, the influence of these interventions on embryo cleavage kinetics has not been investigated. <b><i>Objective:</i></b> The aim of this work was to study whether stress management in couples undergoing an intracytoplasmic sperm injection (ICSI) cycle influences stress levels, mitochondrial DNA (mtDNA) levels in granulosa cells, and cleavage-stage embryos. <b><i>Methods:</i></b> Infertile couples were randomized into a treatment as usual (TAU) group (<i>n</i> = 30) and stress management program (SMP) group (<i>n</i> = 29) at the beginning of an ICSI cycle. Couples in the SMP group attended education and relaxation sessions at each visit to the clinic for folliculometry. The perceived stress scale (PSS) was used to assess stress levels at the beginning and end of the cycle. Moreover, mtDNA levels of granulosa cells and embryo morphokinetics were evaluated. <b><i>Results:</i></b> Post-intervention, women in the SMP group had significantly lower PSS scores than their initial PSS (<i>p</i> &lt; 0.001; effect size, ES = 0.5) and than the final PSS of the TAU group (<i>p</i> = 0.02; ES = 0.09). Additionally, mtDNA levels were significantly lower in luteal granulosa cells of the SMP group than the TAU group (<i>p</i> = 0.02). An earlier time of pronuclei appearance (<i>p</i> = 0.03) and time to 2 cells (<i>p</i> = 0.015) and a faster time to full compaction (<i>p</i> = 0.045) were detected in the embryos of the SMP group compared with the TAU group. <b><i>Conclusion(s):</i></b> The implemented program may reduce stress levels, retard first embryo cleavage, and accelerate embryo compaction. Further studies with an active control group are needed to confirm these results.