cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4211/hs.4c61ac51067e452aaeda64c2dcecb306
title: Water temperature and conductivity, Dinwooody Creek glacial watershed, Wind River Range, Wyoming, summer 2018

description: To investigate glacial controls on water chemistry, we instrumented 13 sites in the Dinwoody Creek watershed (Wind River Range, Wyoming) to monitor conductivity and water temperature during the 2018 summer melt season (late June through late September). The primary sites were located along a longitudinal gradient along Dinwoody Creek (labeled Din-1 through Din-7) starting near the toe of Dinwoody Glacier. Additional sites were selected to capture tributary streams draining glacial, non-glacial, and lake-dominated subwatersheds. At each site, we deployed a HOBO U24 low-range conductivity logger protected by PVC housing with 0.5 cm holes to allow water flow. We recovered water temperature data from all 13 loggers and conductivity data from 8 loggers. An air temperature logger was placed near Din-4 to compare with water temperature measurements. All loggers recorded measurements at 15-min or 60-min intervals. To check the accuracy of the conductivity loggers, we measured conductivity with a YSI ProDSS probe at each stream site when loggers were deployed and retrieved, with similar values (within a few µS/cm) across instruments. Conductivity measurements from the HOBO loggers were converted to specific conductance at 25oC using the “low range” data and temperature compensation method for freshwater lakes and streams options in the HOBOware conductivity assistant. Specifics of logger locations, deployment dates, and sample type are provided in on the first tab of the data sheet.
DOI: 10.17632/dfmtgtg55w.1
title: Eco-Routing Database Project

description: This dataset contains OpenStreetMap (OSM) road network data for the Southeast region of Brazil in Protocol Buffer Binary Format (PBF). The file includes comprehensive geospatial information about the road infrastructure, including street networks, road types, speed limits, one-way restrictions, and road geometries. This dataset was used in the Ecological Route Optimization System project to enable route calculation algorithms (Dijkstra and A*) for comparing ecological (fuel-efficient) versus shortest distance routes.

The PBF format is a compressed, efficient binary format for storing OpenStreetMap data. This dataset can be used for transportation research, route optimization studies, urban planning, and geographic information system (GIS) applications.

Data includes:
- Road network topology (nodes and edges)
- Road names and classifications
- Speed limit information
- One-way street restrictions
- Road segment lengths and geometries
- Geographic coordinates for all network nodes
DOI: 10.4211/hs.5656632a4a4c4b2e96d591b7fc0e2a94
title: Spatially distributed estimates of Manning’s roughness within floodplain areas of the conterminous United States [scripts and datasets]

description: Reach-Scale Floodplain Manning’s Roughness Dataset for the Conterminous United States Derived from Remote Sensing and Machine Learning
Gabriel Barinas1,2, Stephen Good1,2, Samuel Rivera1,3
1Water Resources Graduate Program, Oregon State University, Corvallis OR, USA
2Department of Biological and Ecological Engineering, Oregon State University, Corvallis OR, USA
3School of Civil and Construction Engineering, Oregon State University, Corvallis OR, USA
Correspondence to: Gabriel Barinas (barinasg@oregonstate.edu)

Floodplain roughness, quantified through Manning’s coefficient n, is a critical parameter in hydrological models for predicting flood dynamics and managing water resources. Traditional methods to determine n rely on generalized land cover types and often fail to capture the spatial and structural variability of floodplains, resulting in limited understanding of floodplain roughness variation at regional scales. This study integrates high-resolution remotely sensed canopy height and biomass data from NASA’s Global Ecosystem Dynamics Investigation with other spatially distributed data to map Manning’s roughness at reach scales across the conterminous United States. After evaluation of six machine learning models, the best performing approach (Random Forest) was trained on 4,927 roughness estimates from 804 sites and applied to estimate n at 17.8 million reaches within the National Hydrography Database (NHDPlus HR). These n estimates have an R² of 0.51, a root mean squared error of 0.084, and a mean absolute percentage error of 122, capturing spatial variability in floodplain roughness that traditional static methods fail to represent. We find the sparsely vegetated southwest US region exhibits the lowest mean roughness, while the Appalachian region and parts of the southeast US exhibit moderate to high mean values due to denser and more varied floodplain vegetation. Canopy height and biomass were identified as influential non-linear predictors of n, highlighting the importance of vegetation structure on floodplain roughness. This integration of remote sensing data with machine learning models provides spatially distributed estimates of Manning’s n that elucidate patterns in floodplain roughness variability from reach to continental scales. The dataset and companion code are openly available here.
DOI: 10.5281/zenodo.17915311
title: fMRI ICA V101-200 Full Corr

description: GWAS summary statistics for fMRI ICA full corr
DOI: 10.5281/zenodo.17915313
title: fMRI ICA V101-200 Full Corr

description: GWAS summary statistics for fMRI ICA full corr
DOI: 10.4211/hs.a042c5cb427b45279494b87dc305ed7d
title: Deep Critical Zone State Shifts Hydrology and Well Logs

description: Volcanic provinces are among the most active but least well understood landscapes on Earth. In a publication we show that the central Cascade arc, USA, exhibits systematic spatial covariation of topography and hydrology that are linked to aging volcanic bedrock, suggesting systematic controls on landscape evolution. At the Cascade crest, a locus of Quaternary volcanism, water circulates deeply through the upper ∼ 1 km of crust but transitions to shallow and dominantly horizontal flow as rocks age away from the arc front. We argue that this spatial pattern reflects a temporal state shift in the deep Critical Zone. Chemical weathering at depth, surface particulate deposition, and tectonic forcing drive landscapes away from an initial state with minimal topographic dissection, large vertical hydraulic conductivity, abundant lakes, and muted hydrographs toward a state of deep fluvial dissection, small vertical hydraulic conductivity, few lakes, and flashy hydrographs. Deeply circulating groundwater also impacts volcanism, and Holocene High Cascades eruptions reflect explosive magma-water interactions that increase regional volcanic hazard potential. We propose that a Critical Zone state shift drives volcanic landscape evolution in wet climates and represents a framework for understanding interconnected solid earth dynamics and climate in these terrains.
This resource represents stream discharge data for spring-fed streams that do not have USGS gages, well log data entered from paper copies, and a geotiff of natural lakes in the area.
DOI: 10.4211/hs.fbef1844a00e4926a6020d3607ef5dbd
title: Collected data for Shin et al. (2025): Nutrient limitation induces a productivity decline from light-controlled maximum

description: This resource contains chlorophyll-a measurement from NDS experiments conducted in Greenland streams in 2022-23. In 2022, NDSs were deployed in five streams twice (early and late summer). In 2023, we conducted continuous dosing experiment in one of the five streams, where the dosing separated the reach into three segments (control, +N, +NP). NDSs were deployed in these three segments. Along with NDS results, abiotic factors (light, water temperature, and discharge) were also continuously monitored during NDS deployments.
DOI: 10.15468/dl.djza8b
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "NetworkKey is 99d66b6c-9087-452f-a9d4-f15f2c2d0e7e",
 "TaxonKey is Chordata"
 ]
 },
 {
 "and" : [
 "StateProvince is one of (Georgia)",
 "TaxonKey is one of (Eurycea aquatica [GBIF Backbone Taxonomy])"
 ]
 }
 ]
}

 The dataset's 1 records were derived from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049987-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4211/hs.b355e8f82ad24fb0a143d1382e8ffee5
title: Spatially compounding drought-flood events in Europe between 1981-2020

description: This dataset provides the data needed to reproduce the results by Brunner et al. 2025. Namely, a list of days with spatially compounding drought-flood events with the corresponding weather regimes and a list of days with spatially compounding dry-wet events with the corresponding weather regimes.
These events were extracted from a large-sample dataset of 4299 catchments in Europe with streamflow and precipitation data for the period 1981-2020: Brunner, M., B. Anderson (2024). Hydrologic and meteorologic extremes and transitions for 4299 catchments in Europe, HydroShare, http://www.hydroshare.org/resource/41dac0a2caf24ce0924ec7fe35b27aa1.

Brunner et al. 2025, Spatially Compounding Drought‐Flood Events Are Favored by Atmospheric Blocking Over Europe, Water Resrouces Research, DOI: 10.1029/2024WR039622
DOI: 10.15468/dl.69efjv
title: Occurrence Download

description: A dataset listing the 80 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Guinea",
 "TaxonKey is Araceae"
 ]
}

 The dataset's 80 records were derived from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049993-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/8mtf8k7tjz
title: Evaluation and comparison of the physical, chemical and antibacterial properties of selenium doped natural and synthetic hydroxyapatite

description: Natural hydroxyapatite was extracted from spongy and compact bovine bone tissue using the precipitation method. The obtained HA samples were characterized using scanning electron microscopy, X-ray diffraction analysis, and infrared spectroscopy. It was observed that Se substituted phosphorus without disrupting the crystal structure of HA. The Se substituted samples exhibited antibacterial activity against E. coli and S. aureus strains. However, only the Se-doped HA derived from compact bone tissue showed antifungal activity against the C. albicans strain. The cytotoxicity assay indicated that only the Se-doped HA derived from spongy bone tissue had a toxic effect on normal fibroblast cells. The results were confirmed by the cell viability assay.
DOI: 10.17632/8mtf8k7tjz.1
title: Evaluation and comparison of the physical, chemical and antibacterial properties of selenium doped natural and synthetic hydroxyapatite

description: Natural hydroxyapatite was extracted from spongy and compact bovine bone tissue using the precipitation method. The obtained HA samples were characterized using scanning electron microscopy, X-ray diffraction analysis, and infrared spectroscopy. It was observed that Se substituted phosphorus without disrupting the crystal structure of HA. The Se substituted samples exhibited antibacterial activity against E. coli and S. aureus strains. However, only the Se-doped HA derived from compact bone tissue showed antifungal activity against the C. albicans strain. The cytotoxicity assay indicated that only the Se-doped HA derived from spongy bone tissue had a toxic effect on normal fibroblast cells. The results were confirmed by the cell viability assay.
DOI: 10.4211/hs.55478a4db09c4ade8882cc5d738487c5
title: Black Hawk Lake - Water Quality Monitoring data

description: Excess Nitrate (N) and Phosphorus (P) in agricultural runoff can cause water quality issues like disproportionate eutrophication which can lead to depleted oxygen levels in water bodies.  Implementation of Best Management Practices (BMPs) can help control the issue, however continuous monitoring and evaluation is essential to warrant a positive impact of the implemented BMPs. The objective of this 5-year (2014-2018) study was to compare the in-stream nutrient concentrations and load, both upstream and downstream with in a catchment that has high level of functioning BMPs. Linear Regression (LR) was used to assess temporal trends, and the significance of these trends was evaluated using the ANOVA analysis. The student's t-test was used for assessing spatial agreement/disagreement of the nutrient data. Results show that TSS load and concentration both are significantly higher downstream. Only monthly NO3-N concentration showed a significantly decreasing trend. The load of TSS (Upstream) and OP (Downstream) are significantly increasing for harvest season only. Overall, sediment and associated pollutants appear more sensitive to the intensity of rainfall in the late growing and harvest seasons. A more extended period of observed water quality and flow data are required to see any significant trend in phosphorus concentration.
DOI: 10.4211/hs.b7f9d294de0941a485d5daba466d0fce
title: Expanding towards contraction: the alternation of floods and droughts as a fundamental component in river ecology

description: Climate warming is causing more extreme weather conditions, with both larger and more intense precipitation events as well as extended periods of drought in many regions of the world. The consequence is an alteration of the hydrological regime of streams and rivers, with an increase in the probability of extreme hydrological conditions. Mediterranean-climate regions usually experience extreme hydrological events on a seasonal basis and thus, freshwater Mediterranean ecosystems can be used as natural laboratories for better understanding how climate warming will impact ecosystem structure and functioning elsewhere. In this study, we revisited and contextualized historical and new datasets collected at Fuirosos, a well-studied Mediterranean intermittent stream naturally experiencing extreme hydrological events, to illustrate how the seasonal alternation of floods and droughts influence hydrology, microbial assemblages, water chemistry, and the potential for biogeochemical processing. 
The Hydroshare files contain the data and R code to reproduce the figures shown in this paper, entitled "Expanding towards contraction: the alternation of flood and droughts as fundamental component in river ecology".
DOI: 10.15468/dl.grgwm9
title: Occurrence Download

description: A dataset listing the 60138 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-128.20769 50.10131,-125.30534 48.68038,-123.67825 48.22382,-123.46103 48.23412,-123.25427 48.33459,-123.22506 48.35328,-123.18301 48.41168,-123.14329 48.46659,-123.2239 48.54135,-123.26968 48.70107,-123.18541 48.71313,-123.00517 48.78133,-123.01028 48.83942,-123.26604 48.99779,-122.76294 49.00425,-122.40387 49.00182,-121.74678 48.99829,-121.0967 48.99828,-120.93242 49.67887,-121.0263 49.9605,-121.42526 50.17171,-123.23235 50.42987,-125.34452 51.36861,-125.43258 51.5033,-125.6393 51.81946,-125.96311 52.16504,-128.67706 54.46647,-129.05256 54.72462,-129.05256 54.72462,-129.21684 55.47562,-129.475 55.94499,-129.89743 56.10927,-130.21872 56.42466,-130.4362 56.58,-131.46147 56.79748,-131.8688 57.14189,-132.02071 57.51206,-132.78407 58.0337,-133.20651 58.43266,-133.39425 58.66735,-133.57415 58.91016,-134.28606 59.20713,-134.84931 59.41835,-135.08399 59.69997,-135.57684 59.84078,-136.32783 59.74691,-136.61617 59.48362,-136.93802 59.27753,-137.36045 59.08979,-137.5482 58.87857,-137.06929 59.06175,-136.70333 59.13672,-136.42171 59.34794,-136.16355 59.6061,-135.5299 59.69997,-135.10746 59.48875,-134.9287 59.28049,-134.68503 59.18366,-134.12178 58.80816,-133.44119 58.43266,-132.28812 57.15553,-132.06445 57.06172,-132.05375 56.87428,-131.61625 56.53054,-130.64843 56.27355,-130.10865 55.92152,-130.01478 55.33481,-130.39027 54.84197,-131.89226 54.63075,-133.53507 54.30219,-132.99529 53.2461,-132.8356 52.87031,-131.72733 52.2072,-128.20769 50.10131))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 60138 records were derived from 990 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049988-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.23ucdf
title: Occurrence Download

description: A dataset containing 662 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Apodemus witherbyi (Thomas, 1902)"
 ]
}

 The dataset includes 662 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043655-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a0xw5m
title: Occurrence Download

description: A dataset containing 1700 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lycaste Lindl."
 ]
}

 The dataset includes 1700 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040362-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ggk5jp
title: Occurrence Download

description: A dataset containing 598 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erica fascicularis L.fil."
 ]
}

 The dataset includes 598 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043617-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t579yk
title: Occurrence Download

description: A dataset containing 613 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sitta formosa Blyth, 1843"
 ]
}

 The dataset includes 613 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0264312-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2xzr0
title: Occurrence Download

description: A dataset containing 1999 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Perdicula asiatica (Latham, 1790)"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1999 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040363-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uw6m7z
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Inga silanchensis T.D.Penn.",
 "Year 2000-2021"
 ]
}

 The dataset includes 15 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011115-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6dbc3t
title: Occurrence Download

description: A dataset containing 8009 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Living Specimen, Specimen, Occurrence evidence)",
 "Continent is Europe",
 "CoordinateUncertaintyInMeters 0.0-3039.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Erica scoparia L.",
 "Year 1970-2024"
 ]
}

 The dataset includes 8009 records from 151 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004601-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cygvhy
title: Occurrence Download

description: A dataset containing 12061 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((0.12246 52.19511,0.12405 52.19221,0.12628 52.1909,0.13173 52.19176,0.13113 52.19592,0.12246 52.19511))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 12061 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040364-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t4qn3x
title: Occurrence Download

description: A dataset containing 1939897 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Archilochus colubris (Linnaeus, 1758)"
 ]
}

 The dataset includes 1939897 records from 163 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0266785-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ujy1w3
title: Occurrence Download

description: A dataset containing 77975 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tilia cordata Mill.",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 77975 records from 455 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040366-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.etvkyh
title: Occurrence Download

description: A dataset containing 13881 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Honduras",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 13881 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0268912-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6tkaqg
title: Occurrence Download

description: A dataset listing the 49 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Ghana",
 "TaxonKey is Rotifera"
 ]
}

 The dataset's 49 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004605-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.