cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.2832v
title: Data from: Linkage and trade-off in trophic morphology and behavioral performance of birds

description: 1. Bill closing behaviour involves a complex suite of tissue types,
 kinematics, morphological states and muscle architectural arrangements
 that has been under the scrutiny of natural selection for millions of
 years. Hence, an evolutionary shift to specialize in closing force may
 come at a cost to closing velocity and vice versa. 2. Using field
 measurements on behavioural performance and morphological data from museum
 specimens, we tested predictions of the force–velocity trade-off
 hypothesis in 18 species of North American birds with diverse phylogenetic
 and ecological backgrounds. 3. Linear models revealed that size and shape
 are excellent predictors of both bite force and closing velocity. However,
 taken one at a time, they each have a somewhat unique set of morphological
 predictors. In-lever length, mandibular depth and bill width comprise the
 best model of prediction for force, while a combination of out-lever
 length and total skull length provides the best prediction of closing
 velocity. Additionally, in our sample, only force is size-dependent.
 Hence, the predicted trade-off is revealed only after correcting bite
 force for head size. 4. Various modes of predation and decoupled
 morphological prediction models for performance suggest that
 specialization towards one strategy (e.g. increase force) may not
 necessarily come at a cost to the other. towards one strategy (e.g.
 increase force) may not necessarily come at a cost to the other.
description: Data for
 FE-2013-00888.R2Appendix I. Bill closing
 velocity for 18 species of North American birds. First columns include:
 AOU Species Codes, vernacular and latin binomials. Other columns include:
 BC = bill closing velocity in cm/s (for analyses, I used the maximum value
 for each individual). Location: 1= Private residence in Pittsburgh, PA
 (PPA), 2 = Beechwood Farms Nature Reserve (PPA), 3 = North Park Latodami
 Nature Center (PPA), 4 = Bloomsburg University campus, Bloomsburg, PA, 5 =
 National Aviary in Pittsburgh, (PPA). Sex, M = Male, F = Female, “.” =
 unknown. Appendix II. Bite-force for 18 species of North American birds.
 First columns as in appendix I. Band # = USGS aluminum band number for
 each individual. Asterisk next to four-letter code denotes bite-force
 inferred by regression from a larger data set (Corbin, et al. in prep).
 Recap = recaptured individual; the highest value for captured or
 recaptured bird was used in analysis. Bite-force (N); these are the
 calibrated amplifier readings. Location = 1 Bloomsburg University campus,
 Bloomsburg, PA. 2 = private residence in Orange Township, Columbia County,
 PA, 3 = taken from a data set on netted birds in Coconino Forest, AZ in
 2011 (Corbin, et al. in prep). Appendix III. Skull/jaw morphological
 measurements for 18 species of North American birds. Measurements are in
 mm. First columns as Appendix I, M = male, F = female. Museum specimen
 numbers available upon request from CEC (BAHS, Bloomsburg University,
 Bloomsburg, PA 17815, ccorbin@bloomu.edu, 570-389-4134)
DOI: 10.25625/a2z8t8/qlwn4a
title: Vechta_MC.tab

description: :unav
DOI: 10.25625/a2z8t8/raiais
title: Forst_AF.tab

description: :unav
DOI: 10.25625/a2z8t8/67ze0n
title: Mariensee_AF_precipitation.tab

description: :unav
DOI: 10.25625/a2z8t8/uaecot
title: Forst_AF_precipitation.tab

description: :unav
DOI: 10.5061/dryad.q4545
title: Data from: Tree imbalance causes a bias in phylogenetic estimation of evolutionary timescales using heterochronous sequences

description: Phylogenetic estimation of evolutionary timescales has become routine in
 biology, forming the basis of a wide range of evolutionary and ecological
 studies. However, there are various sources of bias that can affect these
 estimates. We investigated whether tree imbalance, a property that is
 commonly observed in phylogenetic trees, can lead to reduced accuracy or
 precision of phylogenetic timescale estimates. We analysed simulated data
 sets with calibrations at internal nodes and at the tips, taking into
 consideration different calibration schemes and levels of tree imbalance.
 We also investigated the effect of tree imbalance on two empirical data
 sets: mitogenomes from primates and serial samples of the African swine
 fever virus. In analyses calibrated using dated, heterochronous tips, we
 found that tree imbalance had a detrimental impact on precision and
 produced a bias in which the overall timescale was underestimated. A
 pronounced effect was observed in analyses with shallow calibrations. The
 greatest decreases in accuracy usually occurred in the age estimates for
 medium and deep nodes of the tree. In contrast, analyses calibrated at
 internal nodes did not display a reduction in estimation accuracy or
 precision due to tree imbalance. Our results suggest that molecular-clock
 analyses can be improved by increasing taxon sampling, with the specific
 aims of including deeper calibrations, breaking up long branches and
 reducing tree imbalance.
description: ASFV_dataDataset for the African Swine fever virus used in this study.asfv_dat.nexprimates_dataThis contains the dataset of the primates used in this study.primate_data.nex
DOI: 10.25625/a2z8t8/hf9uja
title: Forst_MC_precipitation.tab

description: :unav
DOI: 10.25625/a2z8t8/bkwta3
title: Wendhausen_AF_tower2.tab

description: :unav
DOI: 10.25625/a2z8t8/hjxkss
title: Vechta_MC_precipitation.tab

description: :unav
DOI: 10.25625/a2z8t8/keznwp
title: Wendhausen_MC_precipitation.tab

description: :unav
DOI: 10.5061/dryad.95gq1
title: Data from: The evolution of morphological integration in the ruminant skull

description: Patterns of morphological integration have the potential to influence
 evolutionary trajectories. However, this influence depends on the
 stability of the integration pattern relative to the rate of evolutionary
 change. Studying the evolution of integration over large phylogenetic
 scales is complicated by its multivariate nature and the need to have both
 large sample sizes and a comprehensive taxon coverage. As a result, the
 question of how integration evolves over long time scales is still poorly
 understood. In this study I examined the evolution of integration across
 the phylogeny of extant ruminants, as reflected in their within-population
 covariation structure. I analyzed interlandmark distances from 2,054
 skulls, representing 47 out of the 200 extant species of ruminants,
 including all major subfamilies of bovids and cervids. I estimated the
 within-population covariance matrix for each species, and compared them
 using multidimensional scaling and phylogenetic comparative methods.
 Results show that closely-related taxa differ substantially from each
 other in their integration pattern. However, the differences among
 higher-level clades still reflect their history of common descent.
 Differences between bovids and cervids involve mainly the oral and nasal
 regions, in accord with their different feeding and locomotion
 adaptations. Thus, the effect of both natural selection and phylogenetic
 history can be detected in the ruminant skull even though integration
 varies considerably among closely-related species.
description: EvoOfInt_EvoBioThis data package includes raw data, as well as R code and other information required to reproduce all results in the paper. Raw data and specimen information are provided as both tab-limited text file and R object. Phylogenetic trees are provided as both R object and a nexus file. Other information is provided as R objects. A detailed README file is also included
DOI: 10.25625/a2z8t8/pflni0
title: Mariensee_MC_precipitation.tab

description: :unav
DOI: 10.25625/a2z8t8/qwgisp
title: Forst_MC.tab

description: :unav
DOI: 10.25625/a2z8t8/ozfbqd
title: Dornburg_AF_precipitation.tab

description: :unav
DOI: 10.25625/a2z8t8/4rs4gj
title: Wendhausen_AF_tower3_precipitation.tab

description: :unav
DOI: 10.25625/a2z8t8/y4egbv
title: variable_name_unit.tab

description: :unav
DOI: 10.5061/dryad.50536
title: Data from: Geneious! Simplified genome skimming methods for phylogenetic systematic studies: a case study in Oreocarya (Boraginaceae)

description: Premise of the study: As systematists grapple with how to best harness the
 power of next-generation sequencing (NGS), a deluge of review papers,
 methods, and analytical tools make choosing the right method difficult.
 Oreocarya (Boraginaceae), a genus of 63 species, is a good example of a
 group lacking both species-level resolution and genomic resources. The use
 of Geneious removes bioinformatic barriers and makes NGS genome skimming
 accessible to even the least tech-savvy systematists. Methods: A
 combination of de novo and reference-guided assemblies was used to process
 100-bp single-end Illumina HiSeq 2000 reads. A subset of 25 taxa was used
 to test the suitability of genome skimming for future systematic studies
 in recalcitrant lineages like Oreocarya. Results: The nuclear ribosomal
 cistron, the plastome, and 12 mitochondrial genes were recovered from all
 25 taxa. All data processing and phylogenomic analyses were performed in
 Geneious. We report possible future multiplexing levels and published
 low-copy nuclear genes represented within de novo contigs. Discussion:
 Genome skimming represents a much-improved primary data collection over
 PCR+Sanger sequencing when chloroplast DNA (cpDNA), nuclear ribosomal DNA
 (nrDNA), and mitochondrial DNA (mtDNA) are the target sequences. This
 study details methods that plant systematists can employ to study their
 own taxa of interest.
description: Final ML
 treesContains the final
 published phylogenetic trees for the nrDNA, cpDNA, and mtDNA in both nexus
 and Geneious format.mtDNA exon
 sequencesContains the raw mtDNA
 exon sequences in both fasta and Geneious format. These were aligned and
 trimmed prior to analysis.Nicotiana tabacum exons
 BA000042Contains the mtDNA exon
 sequences extracted from Nicotiana tabacum (BA000042). Reference guided
 assemblies were blastn searched against these extracted exons. Files are
 in both fasta and Geneious format.mtDNA exon
 alignmentsContains the final exon
 alignments used in analyses. Files are in both nexus and Geneious
 format.cpDNA
 alignmentContains the final cpDNA
 alignment used in analyses. Files are in both nexus and Geneious
 format.nrDNA
 alignmentContains the final nrDNA
 alignment used in analyses. Files are in both nexus and Geneious
 format.
DOI: 10.25625/a2z8t8/6731wm
title: Mariensee_AF.tab

description: :unav
DOI: 10.25625/a2z8t8/ocbdyz
title: footprint_2019_Forst_AF_70%.tab

description: :unav
DOI: 10.25625/a2z8t8/vzgf6y
title: footprint_2024_Vechta_MC_70%.tab

description: :unav
DOI: 10.18167/dvn1/6zcrgn
title: Floral traits of nineteen Mediterranean weed species
title: Traits floraux de dix-neuf espèces adventices méditerranéennes

description: The data set describes the floral phenotypes and phenology of 19 common weed species found in olive groves and vineyards in southern France (Occitanie region). In total, 15 floral traits and 10 leaf traits, including phenological, morpho-anatomical and chemical traits, were measured at the plant level (n = 274) in a greenhouse experiment.
description: This work was part of the FLORES ‘Weeds floral ressources’ project (ID 2101-052) and funded by the LabEx AGRO 2011-LABX-002 (under I-Site Muse framework) coordinated by Agropolis Fondation
DOI: 10.25625/a2z8t8/jxodcp
title: footprint_2021_Mariensee_AF_70%.tab

description: :unav
DOI: 10.25625/a2z8t8/rdlrvg
title: footprint_2024_Forst_MC_70%.tab

description: :unav
DOI: 10.5061/dryad.gp302
title: Data from: Vertical distribution of the soil microbiota along a successional gradient in a glacier forefield

description: Spatial patterns of microbial communities have been extensively surveyed
 in well-developed soils, but few studies investigated the vertical
 distribution of microorganisms in newly developed soils after glacier
 retreat. We used 454-pyrosequencing to assess whether bacterial and fungal
 community structures differed between stages of soil development (SSD)
 characterized by an increasing vegetation cover from barren (vegetation
 cover: 0%/ age: 10 years), sparsely-vegetated (13%/ 60 years), transient
 (60%/ 80 years) to vegetated (95%/ 110 years) and depths (surface, 5 and
 20 cm) along the Damma glacier forefield (Switzerland). Stage of soil
 development significantly influenced the bacterial and fungal communities.
 Based on indicator species analyses, metabolically versatile bacteria
 (e.g. Geobacter) and psychrophilic yeasts (e.g. Mrakia) characterized the
 barren soils. Vegetated soils with higher C, N and root biomass consisted
 of bacteria able to degrade complex organic compounds (e.g. Candidatus
 Solibacter), ligno-cellulolytic Ascomycota (e.g. Geoglossum) and
 ectomycorrhizal Basidiomycota (e.g. Laccaria). Soil depth only influenced
 bacterial and fungal communities in barren and sparsely-vegetated soils.
 These changes were partly due to more silt and higher soil moisture in the
 surface. In both soil ages, the surface was characterized by OTUs
 affiliated to Phormidium and Sphingobacteriales. In lower depths, however,
 bacterial and fungal communities differed between both SSDs. Lower depths
 of sparsely-vegetated soils consisted of OTUs affiliated to Acidobacteria
 and Geoglossum whereas depths of barren soils were characterized by OTUs
 related to Gemmatimonadetes. Overall, plant establishment drives the soil
 microbiota along the successional gradient but does not influence the
 vertical distribution of microbiota in recently deglaciated soils.
description: Environmental data Damma
 depthsEnvironmental and qPCR
 data collected in different soil depths in a successional gradient formed
 after glacier retreat. R script summarizing the statistical analyses
 conducted on the data.Damma_data_v2.zipDamma_Depth_OTU_dataAbundances and taxonomic paths of OTUs identified in various depths of different stages of soil development after retreat of the Damma glacier.DNA_seqs_MEC2014Quality-checked sequences from bacteria and fungi retrieved from various depths in different stages of soil development formed after retreat of the Damma glacier.
DOI: 10.25625/a2z8t8/gfwjas
title: footprint_2023_Forst_AF_90%.tab

description: :unav
DOI: 10.25625/a2z8t8/llbfyr
title: footprint_2024_Wendhausen_AF_80%.tab

description: :unav
DOI: 10.25625/a2z8t8/nqvt3b
title: footprint_Dornburg_AF_70%.tab

description: :unav
DOI: 10.5517/ccdc.csd.cc2kwwhv
title: CCDC 2380288: Experimental Crystal Structure Determination

description: Related Article: Lingjuan Chen, Jiaqi Dong, Shan Gao, Yirong Yuan, Junwei Wang, Deng-Tao Yang|2026|Org.Lett.|||doi:10.1021/acs.orglett.5c05129
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25625/a2z8t8/oyzu8i
title: Wendhausen_AF_precipitation_1h.tab

description: :unav
DOI: 10.5061/dryad.rc1k4
title: Data from: Value of information in natural resource management: technical developments and application to pink-footed geese

description: The “value of information” (VOI) is a generic term for the increase in
 value resulting from better information to guide management, or
 alternatively, the value foregone under uncertainty about the impacts of
 management (Yokota and Thompson, Medical Decision Making 2004; 24: 287).
 The value of information can be characterized in terms of several metrics,
 including the expected value of perfect information and the expected value
 of partial information. We extend the technical framework for the value of
 information by further developing the relationship between value metrics
 for partial and perfect information and describing patterns of their
 performance. We use two different expressions for the expected value of
 partial information to highlight its relationship to the expected value of
 perfect information. We also develop the expected value of partial
 information for hierarchical uncertainties. We highlight patterns in the
 value of information for the Svalbard population of the pink-footed goose
 (Anser brachyrhynchus), a population that is subject to uncertainty in
 both reproduction and survival functions. The framework for valuing
 information is seen as having widespread potential in resource decision
 making, and serves as a motivation for resource monitoring, assessment,
 and collaboration.
description: Williams and
 JohnsonOptimal harvesting
 policies
DOI: 10.5517/ccdc.csd.cc2kwwv6
title: CCDC 2380299: Experimental Crystal Structure Determination

description: Related Article: Lingjuan Chen, Jiaqi Dong, Shan Gao, Yirong Yuan, Junwei Wang, Deng-Tao Yang|2026|Org.Lett.|||doi:10.1021/acs.orglett.5c05129
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25625/a2z8t8/ssbjfe
title: footprint_2024_Dornburg_AF_90%.tab

description: :unav
DOI: 10.25625/a2z8t8/utsd5b
title: footprint_2020_Forst_AF_90%.tab

description: :unav
DOI: 10.5517/ccdc.csd.cc2hj6dn
title: CCDC 2309481: Experimental Crystal Structure Determination

description: Related Article: D. D. Strunin, I. A. Nikovskii, T. M. Aliev, Yu. V. Nelyubina
|2025|Russ.J.Coord.Chem.|51|564|doi:10.1134/S1070328424601493
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m2776
title: CCDC 2415217: Experimental Crystal Structure Determination

description: Related Article: Reicha, Rajesh B.R.D. Yamajala, Natarajan Sampath|2026|J.Mol.Struct.|1353|144664|doi:10.1016/j.molstruc.2025.144664
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25625/a2z8t8/e7vblp
title: footprint_Vechta_MC_90%.tab

description: :unav
DOI: 10.5061/dryad.pd790
title: Data from: Experts’ consensus on use of electronic cigarettes: a Delphi survey from Switzerland

description: Objectives: In some countries, nicotine-containing electronic cigarettes
 (e-cigarettes) are considered a consumer product without specific
 regulations. In others (eg, Switzerland), the sale of e-cigarettes
 containing nicotine is forbidden, despite the eagerness of many smokers to
 obtain them. As scientific data about efficacy and long-term safety of
 these products are scarce, tobacco control experts are divided on how to
 regulate them. In order to gain consensus among experts to provide
 recommendations to health authorities, we performed a national consensus
 study. Setting: We used a Delphi method with electronic questionnaires to
 bring together the opinion of Swiss experts on e-cigarettes. Participants:
 40 Swiss experts from across the country. Outcome measures: We measured
 the degree of consensus between experts on recommendations regarding
 regulation, sale, use of and general opinion about e-cigarettes containing
 nicotine. New recommendations and statements were added following the
 experts’ answers and comments. Results: There was consensus that
 e-cigarettes containing nicotine should be made available, but only under
 specific conditions. Sale should be restricted to adults, using quality
 standards, a maximum level of nicotine and with an accompanying list of
 authorised ingredients. Advertisement should be restricted and use in
 public places should be forbidden. Conclusions: These recommendations
 encompass three principles: (1) the reality principle, as the product is
 already on the market; (2) the prevention principle, as e-cigarettes
 provide an alternative to tobacco for actual smokers, and (3) the
 precautionary principle, to protect minors and non-smokers, since
 long-term effects are not yet known. Swiss authorities should design
 specific regulations to sell nicotine-containing e-cigarettes.
description: Questionnaire_Round1Questionnaire sent to the expert panel for the 1st round of the Delphi process.Questionnaire_Round_2Questionnaire sent to the expert panel for the 2nd round of the Delphi process.Questionnaire_Round_3Questionnaire sent to the expert panel for the 3rd round of the Delphi process.Questionnaire_Round_4Questionnaire sent to the expert panel for the 4th round of the Delphi process.Results_Round1Data from 1st RoundResults_Round2Data from round 2Results_round3Data from round 3Results_round_4Data from round 4
DOI: 10.5517/ccdc.csd.cc2m4n5m
title: CCDC 2417540: Experimental Crystal Structure Determination

description: Related Article: Ravallika Aluri, Darakhshan Begum, Regula Sanjeev, Ponnada Chandrasekhar, Jyothi Kumari, Dharmarajan Sriram, Balaram Ghosh, Krishnan Rangan|2026|Chem.Asian J.|21|e70535|doi:10.1002/asia.70535
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m8bkt
title: CCDC 2421086: Experimental Crystal Structure Determination

description: Related Article: Eduard Bernhardt,Tanja Knuplez, Tobias Preitschopf, Andreas Drichel, Björn Beele, Alexey Maximenko, Maik Finze, Adam Slabon |2025|Angew.Chem.,Int.Ed.|65|e19283|doi:10.1002/anie.202519283
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25625/a2z8t8/hvzufo
title: footprint_2022_Dornburg_MC_80%.tab

description: :unav
DOI: 10.25625/a2z8t8/vbuuci
title: footprint_2021_Wendhausen_AF_80%.tab

description: :unav
DOI: 10.5517/ccdc.csd.cc2m99w4
title: CCDC 2422026: Experimental Crystal Structure Determination

description: Related Article: Saksham Mishra, Amit Kumar|2026|Chem.Asian J.|21|e70539|doi:10.1002/asia.70539
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25625/a2z8t8/3sn4wd
title: footprint_2020_Dornburg_MC_70%.tab

description: :unav