cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/h2ysy2fxk3
title: Dataset - Collective violence and glucose metabolism disorders in adolescents living in social conflict situation

description: These are databases that include information on Mexican adolescents with and without pre-diabetes who live exposed to collective violence, poverty and lack of access to health services.
DOI: 10.17632/nhppb95jyd
title: Data for "Elemental differentiation and isotopic fractionation during space weathering of Chang’E-5 lunar soil"

description: This study aims to address the chemical differentiation during space weathering in the CE-5 landing site. Elemental and Fe-Mg-Ca-Sr-Nd isotopic analyses were conducted on sieved Chang'E-5 lunar soils and two basaltic breccias in this study at the Isotope Geochemistry Lab at China University of Geosciences, Beijing.
DOI: 10.17632/smdth2ky5z
title: MLAWSMOTE

description: Performance for MLAWSMOTE
DOI: 10.6084/m9.figshare.12996686.v1
title: relativized abundance estimates.xlsx

description: Mean relativized abundance estimates for each species best recorded by either linear transect censuses (from Alouatta to Tinamus) or camera trapping (from Crax to Tayassu), considering island size classes and continuous forest sites
DOI: 10.6084/m9.figshare.14174828.v1
title: Gastrointestinal cancer in TCGA dataset

description: Immune-related characteristics of patients in Gastrointestinial cancer of TCGA dataset.<br>
DOI: 10.6084/m9.figshare.27011491.v1
title: <b>GloUCP</b>: A global 1 km spatially continuous urban canopy parameters for the WRF model.

description: This dataset provides <b>Glo</b>bal <b>U</b>rban <b>C</b>anopy <b>P</b>arameters (<b>GloUCP</b>) at a 1-km resolution for approximately the year 2020. The data is divided into 288 tiles, each stored in a compressed file, covering 15°×15° geographic regions. The corresponding geographic area for each compressed file can be identified from its filename (e.g., GloUCP-X105_119.Y15_29.zip contains data for the region spanning 105°E-120°E and 15°N-30°N, while GloUCP-X-180_-166.Y-60_-46.zip corresponds to the region between 180°W-165°W and 60°S-45°S).Each compressed file includes 255 <b>geogrid binary format files</b>, with each file representing a 1°×1° region. The specific geographic coverage of each file can be determined by consulting the <b>index file</b> and the file names, as explained in the WRF (Weather Research and Forecasting) User Guide.(e.g., 35161-35280.14281-14400 contains data for the region spanning 113°E-114°E and 29°N-30°N). (2024.09.13)
DOI: 10.6084/m9.figshare.28644392.v1
title: Allosteric Modulation of Plasmodium falciparum Isoleucyl tRNA Synthetase by South African Natural Compounds (Molecular dynamics simulations trajectories)

description: This dataset contains all the information reported in our manuscript submitted to <i>PLOS ONE</i> journal. It describes and illustrates a pipeline for allosteric site prediction in <i>Plasmodium falciparum</i> Isoleucyl tRNA Synthetase enzyme to address multidrug resistance and adverse reaction issues. Molecular dynamics trajectories in their original formats are provided, along with all analysis scripts for each intermediate step. Further CSV files for intermediate steps are included. The CSV data is divided into the <i>PfIleRS</i> folder and <i>HsIleRS</i> for post-MD analysis, while <i>MMGBSA</i> and <i>Network Centrality Analysis</i> are in separate folders.
DOI: 10.6084/m9.figshare.5624878.v1
title: Simulated dicot root systems

description: Library of simulated dicot root systems, with different architectural properties (genotypes). Each genotype was represented by 10 simulations. The different genotypes were based on a standard parameter set (mock) and had one parameter changed: growth rates (slow vs. fast), inter-lateral distances (dense vs sparse) or gravitropisms (steep vs shallow). <br>These root systems were used in web application: https://plantmodelling.shinyapps.io/archidart/
DOI: 10.17632/tj54nv46hj
title: Electric power load dataset

description: Electric power load (active power load) data is created based on hourly voltage (V), current(I) and power factor(pf) information available at 33/11 KV substation (Godishala, huzurabad, Telangana state, India). Hourly voltage, current and power factor information collected during the period from 01.01.2021 to 31.12.2021. Based these values (V,I and pf)  3-phase load on the substation at each hour calculated. This data consists hourly load, status of the day [weekday:0 and weekend:1],  season[Winter:1, Summer:2 and Rainy:0], hourly temperature and humidity information. While preparing the data total 66 missing values are found. This missing data is due to shutdown of the substation for maintenance or power outage. Missing values are replaced with average of load at previous day and next day but at same time of load data missing (In case of Tuesday, Wednesday, Thursday and Friday). Whereas in case of missing load data related to Monday then average of load at Saturday and Tuesday considered,  Similarly if the missing load data belongs to Saturday then average of load at Friday and Monday is considered.  If the missing load data belongs to weekend then average of load at previous weekend and next weekend considered. This dataset consists total 8760 hourly load data values. Load data available in this data set are in kilo-watts, temperature in degree Fahrenheit and humidity in percentage. It has been observed that load data distribution has  a mean value of 2130kW, standard deviation of 1302kW, minimum load is 412kW and peak load is 6306kW. Total number of hours substation shutdown happened in the year 2021 is 66 hours. During the year 2021, godishala town feeder (F1) has 25 outage hours, Bommakal feeder (F2)  has 71 outage hours, Godishala rural feeder (F3)  has 97outage hours and Raikal feeder(F4)  has 46 outage hours.
DOI: 10.25378/janelia.21594129.v2
title: Dataset supporting main results of "ACC neural ensemble dynamics are structured by strategy prevalence"

description: Behavioral and electrophysiological datasets supporting the conclusions of the work in the manuscript titled: "ACC neural ensemble dynamics are structured by strategy prevalence".
The dataset is a Matlab file containing a data structure. Each element in the data structure corresponds to a single session/behavioral sequence type. The fields of the data structure have behavioral data (choices, rewards, trial times, behavioral context), electrophysiological data (binned firing rates around behavioral events) and metadata about each session (animal ID, brain area, location of recordings).
The code for processing the data and generating figures is here: https://doi.org/10.25378/janelia.21594105
DOI: 10.6084/m9.figshare.25250659.v7
title: Data and R codes for Zhang <i>et al.</i> <b>Temporal dynamic of Grime’s CSR strategies in plant communities during 60 years of succession</b>

description: Data and R codes for Zhang <i>et al.</i> <b>Temporal dynamic of Grime’s CSR strategies in plant communities during 60 years of succession</b>
DOI: 10.17632/8z9p4wkvbn
title: Pregnant women with systemic lupus erythematosus in Latin America: systemic review.

description: This is a search carried out to advance a systematic review on results in pregnant patients with systemic lupus erythematosus in Latin America.
DOI: 10.17632/fxf6ysvw89
title: Encuesta de Satisfacción del Usuario SUPERSALUD

description: La Superintendencia Delegada para la Protección al Usuario, a través de la Dirección de Atención al Usuario, Grupo de Atención al Usuario, en cumplimiento del manual de procesos y procedimientos de la entidad, con el objetivo de conocer la satisfacción de los ciudadanos y las ciudadanas respecto del servicio de atención personalizada brindada en la Superintendencia Nacional de Salud, dispone de la encuesta que responde el usuario cuando acude en demanda de trámites y servicios.
DOI: 10.6084/m9.figshare.12609434.v1
title: JVASP-39334 to JVASP-41154

description: JARVIS-DFT
DOI: 10.17632/dmvmghhsbs
title: Data for: SODIUM ION CONDUCTING GEL POLYMER ELECTROLYTE USING POLY(VINYLIDENE FLUORIDE HEXAFLUOROPROPYLENE)

description: Gel polymer electrolyte (GPE) films using polyvinylidene fluoride – hexafluoropropylene (PVdF – HFP) matrix were prepared for aim to achieve good sodium-ion conductivity at room temperature. GPE of PVF-HFP were formed by microporous PVDF-HFP membranes filled and swollen in different liquid electrolytes: GPEs were formed by microporous PVDF-HFP membranes filled and swollen in different liquid electrolytes: NaClO4, NaPF6 and NaTFSI salts dissolved in mixtures of carbonate solvents (propylene carbonate (PC), fluoroethylenecarbonate (FEC)) or ionic liquids (1-ethyl-3-methylimidazolium bis(trifluoromethane-sulfonyl)imide and 1-butyl-3-methyl bis(trifluoromethanesulfonyl)imide). The effect of different electrolytes on the structure and morphology, electrolyte absorption and sodium ionic conductivity of activated membrane were investigated. GPEs showed “sponge-like” structure with high porosity of 80 – 85 % and large pore size. The ionic conductivity of GPEs reached 1-2 mS.cm-1 at room temperature. Sodium intercalation into Na0.44MnO2 electrode was performed in coin-cell type by using GPEs as conduction media. Cycling data of sodium cell using PVdF-HFP/NaClO4 1M-PC:2%FEC exhibited an excellent stable specific capacity of 100 mAh.g-1 at room temperature.
DOI: 10.17632/hysk76z6c3
title: Theophylline and Zinc Sulfate Co-administration improves the Sperm Parameters in Asthenoteratozoospermic Patients: A Double-blind, Randomized Clinical Trial Study

description: Research question: Theophylline can improve sperm quality in patients but also causes sperm DNA fragmentation. The question is “does co-administration of zinc sulfate and theophylline reduce DNA fragmentation in asthenoteratozoospermia men?” 
Design: One hundred and twenty asthenoteratozoospermic patients were divided into Placebo, theophylline, zinc sulfate and theophylline+ zinc sulfate groups. At the beginning of the trial and three months after oral treatment, sperm parameters, viability and DNA fragmentation, oxidative stress and seminal plasma levels of inflammatory and pro-inflammatory markers and theophylline and zinc levels in the blood and seminal plasma were analyzed using the relative techniques and kits. Also, the conception rates following the trial were reported at the end of study. Data were analyzed using one-way ANOVA, Tukey’s test and paired t-test and the means were considered significantly different at P<0.05.
Results: Sperm parameters, oxidative stress, levels of inflammatory and pro-inflammatory markers ameliorated significantly in three groups compared to the placebo while these changes were more significant in the theophylline+ zinc sulfate group. Sperm DNA fragmentation occurred at a significantly lower rate in the zinc sulfate and theophylline+ zinc sulfate groups compared to the Theophylline group. The theophylline and zinc levels in the blood and seminal plasma increased in the theophylline and zinc sulfate groups, respectively. The overall conception rate was 38.3% in this study. 
Conclusions: Co-administration of theophylline and zinc sulfate, not only improves sperm parameters and reduces oxidative stress and inflammation but also protects the sperm DNA from fragmentation caused by theophylline. Therefore, this combination is recommended in infertile men with asthenoteratozoospermia.
DOI: 10.6084/m9.figshare.11347025.v1
title: Table 9_Lysosomal Protein List

description: Lysosomal protein list created by combination of a manually curated bonafide list from the literature and list retrieved from the panther gene ontology database (http://www.pantherdb.org/) and uniprot database (https://www.uniprot.org/) for mouse.
DOI: 10.6084/m9.figshare.13106694.v2
title: Appendix S1 from Species traits elucidate crop pest response to landscape composition: a global analysis

description: Details on the original studies included in the analyses.
DOI: 10.6084/m9.figshare.24201603.v2
title: <b>MD package of wtXPD-damaged-ssDNA</b>

description: <b>MD simulation: wtXPD-damaged-ssDNA</b><b>XPD-64PP.tgz</b> and <b>XPD-CPD.tgz</b><br>The 8 µs MD simulations of human XPD bound to damaged ssDNA, containing a 6−4PP (XPD-64PP) or a CPD (XPD-CPD) lesion right outside the entry pore of XPD, are provided.<br><br><b>Descriptions of each simulations</b><br>1. Simulation of XPD-64PP reveals that 6−4PP initially positioned outside the entry pore is translocated in the 3' to 5' direction as its bases flip into the unoccupied space within the pore.<br>2. Simulation of XPD-CPD reveals that CPD initially positioned outside the DNA entry pore undergoes a backbone-translocation into the pore, but its bases are blocked from entering.<br><br><b>Files included</b><br>For each system, the trajectory files are presented in binary NETCDF format, *.nc, a corresponding topology PRMTOP files, *.top, and the coordinates of the initial structure in PDB files, *.pdb are also provided, where * = XPD-64PP, XPD-CPD.<br><br><b>Note</b><br>1. Water molecules and ions are not included in all files.<br>2. The trajectories were saved every 1 ns.<b>Coordinates of the model of XPG-XPD-XPB bound to the open bubble substrate </b><b>XPG-XPD-XPB-initial.pdb</b> and <b>XPG-XPD-XPB-final.pdb</b>XPG-XPD-XPB-initial.pdb: XPD prior to the shift of the Arch domain within the XPG-XPD-XPB-DNA complex. XPG-XPD-XPB-final.pdb: XPD after the shift of the Arch domain within the XPG-XPD-XPB-DNA complex.<b>Note</b><br>This model is derived from the structural model provided by Bralic <i>et al.</i> In this model, XPB and XPD helicase were replaced with those in the exiting cryo-EM structure of TFIIH-XPA-DNA; XPG was replaced with the existing XPG crystal structure PDB 3Q8K.
DOI: 10.17632/4jm4fh2nk2
title: ALATDYN: A set of Anharmonic LATtice DYNamics codes to compute thermodynamic and thermal transport properties of crystalline solids

description: We introduce a lattice dynamics package which calculates elastic, thermodynamic and thermal transport properties of crystalline materials from data on their force and potential energy as a function of atomic positions. The data can come from density functional theory (DFT) calculations or classical molecular dynamics runs performed in a supercell. First, the model potential parameters, which are anharmonic force constants are extracted from the latter runs. Then, once the anharmonic model is defined, thermal conductivity and equilibrium properties at finite temperatures can be computed using lattice dynamics, Boltzmann transport theories, and a variational principle respectively. In addition, the software calculates the mechanical properties such as elastic tensor, Gruneisen parameters and the thermal expansion coefficient within the quasi-harmonic approximation (QHA). Phonons, elastic constants and thermodynamic properties results applied to the germanium crystal will be illustrated. Using the force constants as a force field, one may also perform molecular dynamics (MD) simulations in order to investigate the combined effects of anharmonicity and defect scattering beyond perturbation theory.
DOI: 10.6084/m9.figshare.22491997.v7
title: CROPGRIDS

description: CROPGRIDS is a comprehensive global, geo-referenced dataset providing area information for 173 crops circa the year 2020, at a resolution of 0.05˚ (~5.6 km at the equator). It represents a major update of the Monfreda et al. (2008) dataset (hereafter MRF), the most widely used geospatial dataset previously available, covering 175 crops with reference year 2000 at 10 km spatial resolution. CROPGRIDS builds on information originally provided in MRF and expands it using 28 selected published gridded datasets, providing more recent crop information at regional, national, and global levels, largely covering the period 2015 – 2020. By combining the gridded information and the 2020 national-level statistics from FAOSTAT, CROPGRIDS reports the updated harvested and crop (physical) area for 173 crops. The new CROPGRIDS data represent a useful input into modelling studies and sustainability analyses including in support of the 2030 Sustainable Development Agenda.<br>For more information, please refer to:Tang F. H. M., Nguyen T. H., Conchedda G., Casse L., Tubiello F., and Maggi F. (2023). CROPGRIDS, a global geo-referenced dataset of 173 crops, Scientific Data (<b>in press</b>).
DOI: 10.6084/m9.figshare.28139639.v7
title: Journal's Data

description: The dataset focuses on comparing the occurrence of lip print patterns observed in frontal and oblique view photographs, detected using ImageJ software. The total number of occurrences of lip patterns in each quadrant, from both frontal and oblique view photographs, is analyzed statistically to assess the similarities between the two views.
DOI: 10.6084/m9.figshare.6989933.v1
title: Assessment of eight reference evapotranspiration (ET<sub>o</sub>) methods considering Köppen climate class in Iran

description: The performance of eight empirical equations for estimating ET<sub>o</sub> at 80 weather stations in Iran is evaluated. The equations assessed are Hargreaves (HGS), Trajkovic (TKC), Berti (BTI), Ravazzani (RZI), Irmak (IMK), Turc (TRC) and two Valiantzas methods (VTS1 and VTS2). The FAO56 reference crop Penman-Monteith (PM) equation is used as a baseline to evaluate their performance. Also, a Köppen climate classification map for Iran is developed and the best ET<sub>o</sub> method for each climate type identified. The updated Köppen climate map shows six climate sub-classes; BWh, BWk, BSh, BSk, Csa and Dsa in Iran with a percentage of land area covered by each sub-class of 43, 17, 7, 9, 11 and 13%, respectively. The best performing ET<sub>o</sub> equation for each climate class in Iran was HGS for BSh, VTS1 for BWk, and VTS2 for BSk, BWh, Csa and Dsa.
DOI: 10.17632/yvt8zvbt8c
title: Innovation, human capital, environmental and economic sustainability nexus: case of MENA countries

description: Efficiency and productivity analysis of innovation, human capital, environmental and economic sustainability nexus: case of MENA countries
DOI: 10.6084/m9.figshare.16900075.v1
title: Responses to the Young Adult Literature Questionnaire of English Teachers (7-12) who Identify as Members of the Church of Jesus Christ of Latter-Day Saints

description: This data set stems from a survey. We crafted both close and open-ended responses. We used quantitative analysis (i.e., descriptive statistics) for the close-ended questions and a qualitative analysis for the open-ended responses.We used Saldana’s method of two-round coding to analyze the qualitative data (Saldaña, 2009). Saldaña (2009) recommends using a specific coding system he calls “values coding” (p. 89) where codes “reflect a participant’s values, attitudes, and beliefs, representing his or her perspectives or worldview” (p. 89). For our second round of coding, we tallied the number of recurring codes as a form of pattern coding (Saldaña, 2009, p. 152). We formed those reoccurring codes into larger themes.
DOI: 10.6084/m9.figshare.28782368.v1
title: data in TXT format to AL-lith Hot Spring sample Original data

description: The data in FASTA GZ format was converted to TXT format.
DOI: 10.6084/m9.figshare.5124820.v1
title: Supplementary Material for: Impact of Mild Cognitive Impairment on Health-Related Quality of Life in Parkinson's Disease

description: <b><i>Background/Aims:</i></b> To assess the impact of mild cognitive impairment (MCI) or cognitive decline on health-related quality of life (HR-QOL) in Parkinson's disease (PD). <b><i>Methods:</i></b> HR-QOL measured by the Parkinson Disease Quality of Life Questionnaire (PDQ-39), MCI according to Movement Disorder Society Task Force criteria and cognitive decline from premorbid baseline were assessed in non-demented PD patients at 6 movement disorder clinics. <b><i>Results:</i></b> Among 137 patients, after adjusting for education, gender, disease duration, and Movement Disorder Society Unified Parkinson's Disease Rating Scale total score, MCI was associated with worse scores within the PDQ-39 dimension of communication (p = 0.008). Subjects were divided into tertiles of cognitive decline from premorbid level. Scores in the dimension of stigma were worst in the second tertile of cognitive decline (p = 0.03). MCI was associated with worse social support scores in the second tertile of cognitive decline (p = 0.008). <b><i>Conclusion:</i></b> MCI and cognitive decline from premorbid baseline are associated with reduced HR-QOL in communication, stigma, and social support domains. The cognitive decline from premorbid baseline modifies the association between MCI and HR-QOL in PD and knowing both will allow a better appreciation of difficulties patients face in daily life.
DOI: 10.6084/m9.figshare.1021647.v4
title: CitNet Explorer

description: CitNet Explorer is a citation network visualisation tool developed at Leiden University, available here http://www.citnetexplorer.nl/Home and documented here http://arxiv.org/abs/1404.5322. In this fileset are some CitNet Explorer compatible files for one of the citation networks we used in our paper 'Transitive Reduction of citation networks', available here - http://arxiv.org/abs/1310.8224.pdf We will hopefully be adding more information to this fileset (eg. author names) soon, but the current files are enough to start visualising the networks.
DOI: 10.6084/m9.figshare.13096703.v1
title: IMU and Mocap data

description: IMU and motion capture system validation datasets for spinal motion.
DOI: 10.6084/m9.figshare.25311631.v1
title: Medicago falcata H20 Genome

description: Medicago falcata H20 Genome