cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.t93y7x
title: Occurrence Download

description: A dataset containing 3067 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gentianella praecox subsp. bohemica (Skalický) Holub, Gentianella ramosa (Hegetschw.) Holub, Comastoma tenellum (Rottb.) Toyok., Gentianella uliginosa (Willd.) Börner, Geocaryum capillifolium (Guss.) Coss., Geocaryum creticum (Boiss. & Heldr.) Engstrand, Geocaryum cynapioides (Guss.) Engstrand, Geocaryum macrocarpum (Boiss. & Spruner) Engstrand, Geocaryum peloponesiacum Engstrand, Geranium ×magnificum Hyl.)",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "DatasetKey is one of (Pl@ntNet automatically identified occurrences, Pl@ntNet observations, iNaturalist Research-grade Observations, Observation.org, Nature data from around the World, naturgucker, Artportalen (Swedish Species Observation System), Norwegian Species Observation Service, Programme d'observation naturaliste participative avec l'application mobile INPN Espèces - Application INPN Espèces: Observations naturalistes, participatives et opportunistes, fondées sur des photographies, Species recordings from the Danish National portal Arter.dk, Lajitietokeskus/FinBIF - Notebook, general observations, Vascular plant records verified via iRecord, iRecord Surveys)",
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 500",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 3067 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069593-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d6qcuq
title: Occurrence Download

description: A dataset containing 833 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Continent is Asia",
 {
 "or" : [
 "Country is India",
 "Country is Sri Lanka",
 "Country is Nepal",
 "Country is Malaysia",
 "Country is Myanmar"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Corvus splendens Vieillot, 1817",
 "Year 1950-2020"
 ]
}

 The dataset includes 833 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0101792-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.js2quz
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carcinonemertes Coe, 1902",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 73 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009958-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.veqhah
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anommatus diecki Reitter, 1875)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 41 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042769-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2tx54n
title: Occurrence Download

description: A dataset containing 2156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Jaltomata procumbens (Cav.) J.L.Gentry"
 ]
}

 The dataset includes 2156 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069598-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gzxmfy
title: Occurrence Download

description: A dataset containing 286 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trichodina Ehrenberg",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 286 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009965-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hqe66p
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eupatorium adenophorum Hort.Berol. ex Kunth, 1869"
 ]
}

 The dataset includes 32 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0101795-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.veuwm6
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Angraecum pumilio Schltr."
 ]
}

 The dataset includes 12 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009380-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5newdi
title: Occurrence Download

description: A dataset containing 2772 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pachygrapsus crassipes Randall, 1840",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2772 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009966-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txmt8v
title: Occurrence Download

description: A dataset containing 9547 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-68.5507 -51.27317,-23.16716 -51.27317,-23.16716 15.32465,-68.5507 15.32465,-68.5507 -51.27317))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Scleractinia"
 ]
}

 The dataset includes 9547 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111277-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2s3duz
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Antimima varians (L.Bolus) H.E.K.Hartmann"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009399-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bdfqvj
title: Occurrence Download

description: A dataset containing 2094599 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anas acuta Linnaeus, 1758"
 ]
}

 The dataset includes 2094599 records from 635 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000608-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.usnamc
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Demansia atra Cogger, 1975",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009977-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ztevm2
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Angraecum sanfordii P.J.Cribb & B.J.Pollard"
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009430-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5fczv
title: Occurrence Download

description: A dataset containing 66051 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Colibri coruscans (Gould, 1846)"
 ]
}

 The dataset includes 66051 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111276-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g39qjs
title: Occurrence Download

description: A dataset containing 26316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Isoodon macrourus (Gould, 1842)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 26316 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009975-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hau3ph
title: Occurrence Download

description: A dataset containing 15143764 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anas platyrhynchos Linnaeus, 1758"
 ]
}

 The dataset includes 15143764 records from 1580 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000612-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ty6cwn
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Hedycarya rivularis"
 ]
}

 The dataset includes 43 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058947-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16928268
title: The Global Coastal Transect Repository (GCTR): An analyis-ready, cloud-native data repository for coastal analytics

description: The Global Coastal Transect Repository (GCTR) is an extension of the Global Coastal Transect System (GCTS), which provides over 11 million cross-shore transects spaced at 100-meter intervals along the world's coastlines.

This repository extends the GCTS framework by adding two attribute sets:

Directional Coastline Proximity: To characterize the spatial coastal context, this set provides 12 distance measurements from each transect origin to the nearest OpenStreetMap (OSM) coastline. These measurements are calculated along fixed bearings at 30° intervals (0°, 30°, 60°, ..., 330°). This provides a simple yet powerful proxy for coastal orientation and climate exposure (e.g., wave protected vs. wave unprotected coasts).

Coastal Exposure Metrics: To quantify the exposure of human assets to coastal processes, this set provides metrics derived from the Overture Maps global building footprints dataset. For each transect, it includes:



The distance from the shoreline to the nearest building footprint.

The distance from the OpenStreetMap coastline to the nearest building footprint. 

The total count of building footprints intersecting a 100-meter wide coastal zone centered on the transect.

The total area (in square meters) of these intersecting building footprints.


Structure and Format:

The dataset is provided as a collection of GeoParquet files, partitioned by continent. Each row corresponds to a single coastal transect and contains the original GCTS attributes alongside the new derived attributes.

Usage and Access:

While the data is available here for download, we recommend direct cloud access for large-scale analytics via the CoCliCo STAC catalog. The coastpy Python library provides the primary interface for discovering, loading, and analyzing this data. For usage instructions and tutorials, please see the project repository: https://github.com/TUDelft-CITG/coastpy.

Citation:

When using this dataset, please cite the following two papers:

For the foundational transect system (GCTS): Calkoen, F. R., Luijendijk, A. P., Vos, K., Kras, E., & Baart, F. (2025). Enabling coastal analytics at planetary scale. Environmental Modelling & Software, 183, 106257. https://doi.org/10.1016/j.envsoft.2024.106257

For the coastal exposure metrics and the directional coastline proximity: Calkoen, F. R., Luijendijk, A. P., Barli, P., Hemmes, J., Ranasinghe, R., & Nicholls, R. J. (2025). Global coastal exposure and future erosion impacts on sandy shores. Manuscript in preparation.
DOI: 10.15468/dl.2sq74w
title: Occurrence Download

description: A dataset containing 28840 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Vicia hirsuta (L.) Gray",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 28840 records from 300 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018848-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/5173
title: HKUST-CrystDB
DOI: 10.15468/dl.64jckn
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is December",
 "OccurrenceStatus is Present",
 "TaxonKey is Jacanidae",
 "Year 2023-2025"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005526-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.19027508.v1
title: Behavioral Data.xlsx

description: Behavioral data showing the time spent in each behavior for each rat, presented at Neural correlates of distinct levels of predatory threat in dorsal periaqueductal gray neurons.
DOI: 10.6084/m9.figshare.c.3666373_d3.v1
title: Additional file 3 of TTCA: an R package for the identification of differentially expressed genes in time course microarray data

description: The complete result table is given in Table S4. (XLSX 816 kb)
DOI: 10.6084/m9.figshare.22591759.v1
title: Untitled Item

description: BioClim environmental variables 30 arcsec
DOI: 10.6084/m9.figshare.25503343.v1
title: Data from: From treetops to river bottoms: exploring the role of phyllosphere fungi in aquatic fungal communities

description: These are the files necessary to follow the qSIP pipeline as described in Finley, et al., 2019. Metadata is also included to differentiate between the two leaf types, and to compare the phyllosphere data, which was not put through the qSIP pipeline. The feature-table is included as a courtesy. It contains the ASV assignments given to sequences after being denoised using the DADA2 plug-in in QIIME2. Raw sequence data can be accessed at the following link: https://dataview.ncbi.nlm.nih.gov/object/PRJNA1093091?reviewer=h0r55ld4h206fu77cfrm888on4.<br>"Figure_inputs.csv" contains relative growth rates and relative abundances of each taxon per leaf type as calculated by the R pipeline described in Finley et al., 2019. All figures in this paper should be possible to recreate from this table, but it is not technically raw data.
DOI: 10.6084/m9.figshare.28057661.v1
title: <b>Bacterial alpha diversity but fungal beta diversity are more responsive to crop rotation</b>

description: Data and Code for the meta-analysis
DOI: 10.6084/m9.figshare.14495811.v2
title: Drought.Net.HST2017.Soil.Fungi.fITS7.ITS4

description: Soil fungal metabarcoding sequence data with N filtered.
DOI: 10.6084/m9.figshare.23779860.v1
title: T-S, altimeter zonal wind data sets over the Tropical Pacific and software used in Eusebi Borzelli and Carniel (2023)-Where the winds clash: what is really triggering El Niño initiation? npj Climate and Atmos. Sci.

description: The data and software in this repository have been used in Eusebi Borzelli and Carniel (2023)- Where the winds clash: what is really triggering El Niño initiation? npj Climate and Atmos. Sci.
DOI: 10.6084/m9.figshare.6274148.v2
title: Gill surface area and ecological lifestyle traits in 12 shark species

description: These data and code are from Bigman et al. (2018) Journal of Morphology and include the raw gill surface area and body mass estimates for 12 shark species, the assigned ecological lifestyle traits for each of those 12 species, and the raw gill surface area and associated dimensions (total filament length, average lamellar frequency, and mean bilateral lamellar surface area) as well as body mass for <i>Mustelus californicus </i>examined in this study<i>. </i>Also included is the code for all analyses in the paper. <br>These data are primarily obtained from Hughes (1972), Hughes et al. (1986), Emery and Sczcepanski (1985), Hata (1993), Wegner et al. (2010), and Wootton et al. (2016). Data were available from more than one study for three species (Common Thresher Shark, Shortfin Mako, and Sandbar Shark). We urge anyone who is using these data to read the original papers to understand the data.<br><br><br>*Cite this figshare and the following if any of the data or code is used:<br>Bigman JS, Pardo SA, Prinzing TS, Dando M, Wegner NC, Dulvy NK. Ecological lifestyles and the scaling of shark gill surface area. Journal of Morphology. 2018; 1-9.
DOI: 10.15468/dl.8bkbdk
title: Occurrence Download

description: A dataset containing 7614 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alternanthera brasiliana (L.) Kuntze"
 ]
}

 The dataset includes 7614 records from 317 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001437-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.3553053.v1
title: Appendix C. Tables showing the occurrence and abundance of algal and mobile invertebrate species across treatments.

description: Tables showing the occurrence and abundance of algal and mobile invertebrate species across treatments.
DOI: 10.6084/m9.figshare.28107605.v1
title: <b>Ruminative Thought Style and its Relationship to Quality of Life Among University Students</b>

description: Data set for <b>Ruminative Thought Style and its Relationship to Quality of Life Among University Students</b> research
DOI: 10.17632/sb6hrs3fbn
title: LINF_310019500

description: pentamidine resistance protein 1 | ABCC5
Leishmania infantum (strain JPCM5)
DOI: 10.60893/figshare.jcp.27264729.v1
title: Supplementary Material 1

description: Notes and Figures
DOI: 10.6084/m9.figshare.21299502.v6
title: Resolution, conflict and rate shifts: insights from a densely sampled plastome phylogeny for Rhododendron (Ericaceae)

description: • <strong>Background and Aims</strong> <em>Rhododendron </em>is a species-rich and taxonomically challenging genus due to recent adaptive radiation and frequent hybridization. A well-resolved phylogenetic tree would help to understand the diverse history of <em>Rhododendron </em>in the Himalaya–Hengduan Mountains where the genus is most diverse.
• <strong>Methods </strong>We reconstructed the phylogeny based on plastid genomes with broad taxon sampling, covering 161 species representing all eight subgenera and all 12 sections, including ~45 % of the <em>Rhododendron </em>species native to the Himalaya–Hengduan Mountains. We compared this phylogeny with nuclear phylogenies to elucidate reticulate evolutionary events and clarify relationships at all levels within the genus. We also estimated the timing and diversification history of <em>Rhododendron</em>, especially the two species-rich subgenera <em>Rhododendron </em>and <em>Hymenanthes </em>that comprise &gt;90 % of <em>Rhododendron </em>species in the Himalaya–Hengduan Mountains.
• <strong>Key Results </strong>The full plastid dataset produced a well-resolved and supported phylogeny of <em>Rhododendron</em>. We identified 13 clades that were almost always monophyletic across all published phylogenies. The conflicts between nuclear and plastid phylogenies suggested strongly that reticulation events may have occurred in the deep lineage history of the genus. Within <em>Rhododendron</em>, subgenus <em>Therorhodion </em>diverged first at 56 Mya, then a burst of diversification occurred from 23.8 to 17.6 Mya, generating ten lineages among the component 12 clades of core <em>Rhododendron</em>. Diversification in subgenus <em>Rhododendron </em>accelerated c. 16.6 Mya and then became fairly continuous. Conversely, <em>Hymenanthes </em>diversification was slow at first, then accelerated very rapidly around 5 Mya. In the Himalaya–Hengduan Mountains, subgenus <em>Rhododendron </em>contained one major clade adapted to high altitudes and another to low altitudes, whereas most clades in <em>Hymenanthes </em>contained both low- and high-altitude species, indicating greater ecological plasticity during its diversification.
• <strong>Conclusions </strong>The 13 clades proposed here may help to identify specific ancient hybridization events. This study will help to establish a stable and reliable taxonomic framework for <em>Rhododendron</em>, and provides insight into what drove its diversification and ecological adaption. Denser sampling of taxa, examining both organelle and nuclear genomes, is needed to better understand the divergence and diversification history of <em>Rhododendron</em>.
DOI: 10.3886/e221201
title: Department of Veterans Affairs - Veteran Population Data

description: This dataset is based on American Community Survey data related to Veterans, including period of service and geographic location.
DOI: 10.3886/e221201v1
title: Department of Veterans Affairs - Veteran Population Data

description: This dataset is based on American Community Survey data related to Veterans, including period of service and geographic location.