cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ungztj
title: Occurrence Download

description: A dataset containing 3540951 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Lao People’s Democratic Republic, Viet Nam, Cambodia, Thailand, Myanmar, Malaysia, Singapore, Indonesia, Brunei Darussalam, Philippines, Timor-Leste)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 3540951 records from 1036 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065744-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m3wesj
title: Occurrence Download

description: A dataset listing the 656 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((72.74146 36.839,72.81472 36.62359,72.9514 36.60938,73.04544 36.73184,73.12526 36.74934,73.26084 36.76027,73.34941 36.81604,73.4839 36.81713,73.63698 36.83025,73.73102 36.8554,73.81412 36.92101,73.91253 37.01614,73.86989 37.06315,73.82615 37.10798,73.7179 37.12439,73.6184 37.15391,73.41611 37.12767,73.22585 37.13641,73.12088 37.14953,73.02029 37.155,72.78739 37.1386,72.73271 37.12111,72.6682 37.10252,72.63868 37.04457,72.64852 36.91445,72.74146 36.839))",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 656 records were derived from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012699-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pxm362
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002128-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vv6dtg
title: Occurrence Download

description: A dataset containing 2224182 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alcedo atthis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-180 -90, 180 -90, 180 90, -180 90, -180 -90))"
 ]
}

 The dataset includes 2224182 records from 3060 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017410-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8r7tk7
title: Occurrence Download

description: A dataset containing 322 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Metallura odomae G.R.Graves, 1980)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 322 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0291345-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pwbs27
title: Occurrence Download

description: A dataset containing 4362 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección Ictiológica - Museo de Historia Natural Unillanos"
 ]
}

 The dataset includes 4362 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278626-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xzfd3e
title: Occurrence Download

description: A dataset containing 985 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Metallura theresiae Simon, 1902)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 985 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0291349-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j4bnx2
title: Occurrence Download

description: A dataset containing 4232 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Accipiter superciliosus (Linnaeus, 1766)"
 ]
}

 The dataset includes 4232 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278628-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h9kknu
title: Occurrence Download

description: A dataset containing 260 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Xenopipo uniformis (Salvin & Godman, 1884))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 260 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0291346-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4aybau
title: Occurrence Download

description: A dataset containing 152 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Accipiter ventralis P.L.Sclater, 1866"
 ]
}

 The dataset includes 152 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278630-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5zpdyq
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laelia undulata (Lindl.) L.O.Williams"
 ]
}

 The dataset includes 113 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002796-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5p7a5h
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ptilocercus lowii Gray, 1848"
 ]
}

 The dataset includes 39 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0291359-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6kr5kb
title: Occurrence Download

description: A dataset containing 354 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllodactylus gerrhopygus (Wiegmann, 1834)"
 ]
}

 The dataset includes 354 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278633-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ks9hhn
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laelia weberbaueriana (Kraenzl.) C.Schweinf."
 ]
}

 The dataset includes 21 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002797-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xhacmz
title: Occurrence Download

description: A dataset containing 5147 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Specimen)",
 "TaxonKey is Bradypus variegatus Schinz, 1825"
 ]
}

 The dataset includes 5147 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0291351-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6yy49x
title: Occurrence Download

description: A dataset containing 2664579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 2664579 records from 3889 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002691-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s9jvmc
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample)",
 "OccurrenceStatus is Present",
 "TaxonKey is Phyllosticta citricarpa (McAlpine) Aa",
 "Year 1991-2024"
 ]
}

 The dataset includes 133 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0094652-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25886264
title: Characteristics and phylogenetic analysis of the complete chloroplast genome of <i>Cornus hongkongensis</i> Hemsl. 1888 (Cornaceae)

description: <i>Cornus hongkongensis</i> Hemsl. 1888, native to Hong Kong, belongs to the subgenus Syncarpea within the <i>Cornus</i> genus of the <i>Cornaceae</i> family. The complete chloroplast genome of <i>C. hongkongensis</i> spans 156,954 bp, comprising four subregions: a large single-copy region (86,290 bp), a small single-copy region (18,394 bp), and a pair of inverted repeats (26,135 bp). Within the chloroplast genome of <i>C. hongkongensis</i>, we identified 113 unique genes, including 80 protein-encoding genes, four ribosomal RNA (rRNA) genes, and 30 transfer RNA (tRNA) genes. Phylogenetic analysis based on the complete chloroplast genome of 30 related taxa of the <i>Cornus</i> genus indicates that <i>C. hongkongensis</i> has not formed a monophyletic lineage. Analyses of sequence divergence found three intergenic regions including <i>rps</i>19-<i>rpl</i>22, <i>ccs</i>A-<i>ndh</i>D, and <i>atp</i>H-<i>atp</i>I, exhibiting a high degree of variations. The first chloroplast genome of <i>C. hongkongensis</i> was reported in this work contributes to the enrichment of genomic data for the genus <i>Cornus</i>.
DOI: 10.6084/m9.figshare.25886264.v1
title: Characteristics and phylogenetic analysis of the complete chloroplast genome of <i>Cornus hongkongensis</i> Hemsl. 1888 (Cornaceae)

description: <i>Cornus hongkongensis</i> Hemsl. 1888, native to Hong Kong, belongs to the subgenus Syncarpea within the <i>Cornus</i> genus of the <i>Cornaceae</i> family. The complete chloroplast genome of <i>C. hongkongensis</i> spans 156,954 bp, comprising four subregions: a large single-copy region (86,290 bp), a small single-copy region (18,394 bp), and a pair of inverted repeats (26,135 bp). Within the chloroplast genome of <i>C. hongkongensis</i>, we identified 113 unique genes, including 80 protein-encoding genes, four ribosomal RNA (rRNA) genes, and 30 transfer RNA (tRNA) genes. Phylogenetic analysis based on the complete chloroplast genome of 30 related taxa of the <i>Cornus</i> genus indicates that <i>C. hongkongensis</i> has not formed a monophyletic lineage. Analyses of sequence divergence found three intergenic regions including <i>rps</i>19-<i>rpl</i>22, <i>ccs</i>A-<i>ndh</i>D, and <i>atp</i>H-<i>atp</i>I, exhibiting a high degree of variations. The first chloroplast genome of <i>C. hongkongensis</i> was reported in this work contributes to the enrichment of genomic data for the genus <i>Cornus</i>.
DOI: 10.6084/m9.figshare.25764232
title: The complete mitochondrial genome of <i>Neuroctenus taiwanicus</i> (Hemiptera: Aradidae)

description: <i>Neuroctenus taiwanicus</i> Kormilev, 1955 is a flat-bodied and enigmatic bug that was first discovered on the island of Taiwan, China. In this study, the whole mitochondrial genome of <i>N. taiwanicus</i> was sequenced and annotated for the first time, and its genomic data were uploaded to Genbank feedback number OR675057. The mitochondrial genome of <i>N. taiwanicus</i> is 15,340 bp in length, a typical circular DNA encoding 37 genes and a control region with 68.4% A + T content. The phylogeny reveals the taxonomic status of <i>N. taiwanicus</i>, which is most closely related to <i>N. yunnanensis</i>, and demonstrates the sister relationship among <i>Neuroctenus</i>, <i>Mezira</i>, and <i>Brachyrhynchus</i>. In addition, the results also confirm that Aradinae and Calisiinae are the earliest branching and more primitive in the family Aradidae, which is consistent with the analysis of the traditional classification.
DOI: 10.6084/m9.figshare.25764232.v1
title: The complete mitochondrial genome of <i>Neuroctenus taiwanicus</i> (Hemiptera: Aradidae)

description: <i>Neuroctenus taiwanicus</i> Kormilev, 1955 is a flat-bodied and enigmatic bug that was first discovered on the island of Taiwan, China. In this study, the whole mitochondrial genome of <i>N. taiwanicus</i> was sequenced and annotated for the first time, and its genomic data were uploaded to Genbank feedback number OR675057. The mitochondrial genome of <i>N. taiwanicus</i> is 15,340 bp in length, a typical circular DNA encoding 37 genes and a control region with 68.4% A + T content. The phylogeny reveals the taxonomic status of <i>N. taiwanicus</i>, which is most closely related to <i>N. yunnanensis</i>, and demonstrates the sister relationship among <i>Neuroctenus</i>, <i>Mezira</i>, and <i>Brachyrhynchus</i>. In addition, the results also confirm that Aradinae and Calisiinae are the earliest branching and more primitive in the family Aradidae, which is consistent with the analysis of the traditional classification.
DOI: 10.6084/m9.figshare.25780064
title: The complete chloroplast genome and phylogenetic analysis of <i>Cyperus brevifolius</i> (Rottb.) Hassk. 1844 (Cyperaceae)

description: The medicinal plant <i>Cyperus brevifolius</i> (Rottb.) Hassk. 1844 has a long history of use in traditional Chinese medicine. In this study, we determined and systematically analyzed the complete chloroplast (cp) genome of <i>C. brevifolius</i>. The genome is 183,717 bp in length with a GC content of 33.24%. It comprises four distinct regions: a large-single copy (LSC) region of 101,190 bp, a small-single copy (SSC) region of 10,366 bp, and two inverted repeat (IR) regions of 36,079 bp each. A total of 137 genes are present in the genome including 89 protein-coding genes, 40 tRNA genes, and eight rRNA genes. Phylogenetic analysis reveals that <i>C. brevifolius</i> belongs to the <i>Cyperus</i> genus. This newly sequenced cp genome provides valuable insights for future genetic and genomic studies on <i>Cyperus</i>.
DOI: 10.6084/m9.figshare.25780064.v1
title: The complete chloroplast genome and phylogenetic analysis of <i>Cyperus brevifolius</i> (Rottb.) Hassk. 1844 (Cyperaceae)

description: The medicinal plant <i>Cyperus brevifolius</i> (Rottb.) Hassk. 1844 has a long history of use in traditional Chinese medicine. In this study, we determined and systematically analyzed the complete chloroplast (cp) genome of <i>C. brevifolius</i>. The genome is 183,717 bp in length with a GC content of 33.24%. It comprises four distinct regions: a large-single copy (LSC) region of 101,190 bp, a small-single copy (SSC) region of 10,366 bp, and two inverted repeat (IR) regions of 36,079 bp each. A total of 137 genes are present in the genome including 89 protein-coding genes, 40 tRNA genes, and eight rRNA genes. Phylogenetic analysis reveals that <i>C. brevifolius</i> belongs to the <i>Cyperus</i> genus. This newly sequenced cp genome provides valuable insights for future genetic and genomic studies on <i>Cyperus</i>.
DOI: 10.6084/m9.figshare.25886267
title: The complete chloroplast genome sequence of <i>Calystegia hederacea</i> Wall. in Roxb. 1824 (Convolvulaceae) in Enshi, Hubei

description: <i>Calystegia hederacea</i> Wall. in Roxb. 1824 is a perennial herbaceous vine in the family Convolvulaceae and has several biological effects. Herein, we reported the first complete chloroplast genome of <i>C. hederacea</i>. The chloroplast genome sequence was 152,057 bp in length, comparing a large single-copy (LSC) region of 87,891 bp, a small single-copy (SSC) region of 19,866 bp, and a pair of inverted repeat (IR) regions of 22,150 bp. This sequenced chloroplast genome contained 126 predicted genes, including 81 protein-coding genes, 37 tRNA genes, and eight rRNA genes, and the total GC content of the chloroplast genome was 37.79%. Phylogenetic analysis revealed that <i>C. hederacea</i> was closely related to <i>C. soldanella</i>. The chloroplast genome presented in this study will enrich the genome information of the genus <i>Calystegia</i> and provide deeper insights into the evolution study of the family Convolvulaceae.
DOI: 10.6084/m9.figshare.25886267.v1
title: The complete chloroplast genome sequence of <i>Calystegia hederacea</i> Wall. in Roxb. 1824 (Convolvulaceae) in Enshi, Hubei

description: <i>Calystegia hederacea</i> Wall. in Roxb. 1824 is a perennial herbaceous vine in the family Convolvulaceae and has several biological effects. Herein, we reported the first complete chloroplast genome of <i>C. hederacea</i>. The chloroplast genome sequence was 152,057 bp in length, comparing a large single-copy (LSC) region of 87,891 bp, a small single-copy (SSC) region of 19,866 bp, and a pair of inverted repeat (IR) regions of 22,150 bp. This sequenced chloroplast genome contained 126 predicted genes, including 81 protein-coding genes, 37 tRNA genes, and eight rRNA genes, and the total GC content of the chloroplast genome was 37.79%. Phylogenetic analysis revealed that <i>C. hederacea</i> was closely related to <i>C. soldanella</i>. The chloroplast genome presented in this study will enrich the genome information of the genus <i>Calystegia</i> and provide deeper insights into the evolution study of the family Convolvulaceae.
DOI: 10.6084/m9.figshare.25736021
title: Characterization of the complete chloroplast genome of <i>Helicteres hirsuta</i> Lour. 1790 (Helicteriodeae: Malvaceae)

description: <i>Helicteres hirsuta</i> Lour. 1790 is a precious medicinal plant species, especially for treating chronic liver diseases. Genomic data on <i>H. hirsuta</i> are limited. Therefore, this current study aimed to characterize the chloroplast genome of <i>H. hirsuta</i> and reconstruct the phylogenetic relationship among Helicteroideae taxa. Consequently, the complete chloroplast genome of <i>H. hirsuta</i> was 163,404 bp in length and contained 113 unique genes (79 protein-coding genes, 30 tRNA genes, and four rRNA genes). Notably, two introns of <i>clpP</i> gene of <i>H. hirsuta</i> were lost in comparison to that of other Helicteroideae species. The phylogenetic tree based on chloroplast genomes of eleven Helicteroideae species revealed that <i>H. hirsuta</i> was closely related to <i>Reevesia</i> species. In conclusion, our study described the first complete chloroplast genome of <i>H. hirsuta</i>, which is essential for tracing evolutionary history in the Helicteroideae subfamily.
DOI: 10.6084/m9.figshare.25736021.v1
title: Characterization of the complete chloroplast genome of <i>Helicteres hirsuta</i> Lour. 1790 (Helicteriodeae: Malvaceae)

description: <i>Helicteres hirsuta</i> Lour. 1790 is a precious medicinal plant species, especially for treating chronic liver diseases. Genomic data on <i>H. hirsuta</i> are limited. Therefore, this current study aimed to characterize the chloroplast genome of <i>H. hirsuta</i> and reconstruct the phylogenetic relationship among Helicteroideae taxa. Consequently, the complete chloroplast genome of <i>H. hirsuta</i> was 163,404 bp in length and contained 113 unique genes (79 protein-coding genes, 30 tRNA genes, and four rRNA genes). Notably, two introns of <i>clpP</i> gene of <i>H. hirsuta</i> were lost in comparison to that of other Helicteroideae species. The phylogenetic tree based on chloroplast genomes of eleven Helicteroideae species revealed that <i>H. hirsuta</i> was closely related to <i>Reevesia</i> species. In conclusion, our study described the first complete chloroplast genome of <i>H. hirsuta</i>, which is essential for tracing evolutionary history in the Helicteroideae subfamily.
DOI: 10.6084/m9.figshare.25756012
title: The complete chloroplast genome sequence and phylogenetic analysis of the Bichetii grass <i>Chlorophytum laxum</i> (Asparagaceae)

description: <i>Chlorophytum laxum</i> of Asparagaceae is a valuable ornamental plant native to the tropical regions of Asia, Africa, and Australia. The plant also has medicinal properties and is used as source for folk medicine. Despite being commercially important, genetic studies of <i>C. laxum</i> are still limited. To expand the genomic information of this plant species, we sequenced, assembled, and characterized its complete chloroplast genome. The chloroplast genome was 153,678 bp in length, with a large single-copy region (83,225 bp) and a small single-copy region (18,031 bp) separated by a pair of inverted repeat regions (26,211 bp each). A total of 127 genes were predicted, including 81 protein-coding, 38 tRNA, and eight rRNA genes. The overall GC content was 37.3%. Based on current sampling size, phylogenetic analysis using the maximum likelihood based on the complete chloroplast genome sequence revealed that the relationship in <i>Chlorophytum</i> is well resolved; <i>C. laxum</i> was closely related to <i>C. rhizopendulum</i>.
DOI: 10.6084/m9.figshare.25756012.v1
title: The complete chloroplast genome sequence and phylogenetic analysis of the Bichetii grass <i>Chlorophytum laxum</i> (Asparagaceae)

description: <i>Chlorophytum laxum</i> of Asparagaceae is a valuable ornamental plant native to the tropical regions of Asia, Africa, and Australia. The plant also has medicinal properties and is used as source for folk medicine. Despite being commercially important, genetic studies of <i>C. laxum</i> are still limited. To expand the genomic information of this plant species, we sequenced, assembled, and characterized its complete chloroplast genome. The chloroplast genome was 153,678 bp in length, with a large single-copy region (83,225 bp) and a small single-copy region (18,031 bp) separated by a pair of inverted repeat regions (26,211 bp each). A total of 127 genes were predicted, including 81 protein-coding, 38 tRNA, and eight rRNA genes. The overall GC content was 37.3%. Based on current sampling size, phylogenetic analysis using the maximum likelihood based on the complete chloroplast genome sequence revealed that the relationship in <i>Chlorophytum</i> is well resolved; <i>C. laxum</i> was closely related to <i>C. rhizopendulum</i>.