cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27118074
title: Supplementary Material for: Epidemiology and outcomes associated with cognitive frailty and reserve in a stroke population – systematic review and meta-analysis

description: Background: Cognitive frailty and the related concepts of cognitive reserve and imaging-based brain frailty are of increasing interest in older adult care. However, there is uncertainty regarding their importance within a stroke population. We aimed to establish the prevalence of cognitive frailty and reserve in stroke and determine impact on outcomes.

Methods: We conducted a systematic review across multidisciplinary electronic databases using validated search syntax. The protocol for this review has been published (PROSPERO, CRD42023433385). We identified studies on cognitive frailty and cognitive reserve, including studies that used related concepts. We extracted data to inform estimates of prevalence, and associations with outcomes of physical function, cognition and quality of life, performing meta-analyses where possible. Risk of bias was assessed using Newcastle-Ottawa tools appropriate to study design.

Results: Our search returned 12,095 studies, from which 14 papers met our criteria. No studies described cognitive frailty, rather studies described cognitive reserve and brain frailty. Cognitive reserve was assessed using proxy measures of education, employment, and leisure time. Four studies used the cognitive reserve index questionnaire (CRIq) with pooled estimate score of 103.25, 95%CI:96.87-109.65 (indicating moderate cognitive reserve). Cognitive reserve had varying associations with post-stroke outcomes, three studies (n=7759 participants) reporting significant negative association with cognitive measures. Brain frailty was assessed using imaging markers. Across four studies (n=3086 participants) pooled prevalence of brain frailty was 73.8%, 95%CI:72.2-75.3. Higher brain frailty was associated with poorer post stroke outcomes for majority of studies assessed. Seven studies (50%) were scored as low risk of bias. 

Conclusions: Attempts to synthesise these data were complicated by inconsistency in terminology and heterogeneity in methods. However, our findings suggest that brain frailty is common in stroke and associated with poorer outcomes. The epidemiology of cognitive frailty and reserve is less well described. All these measures may be useful for prognostication in stroke, but there are multiple areas where more research is needed.
DOI: 10.15468/dl.ktpbaa
title: Occurrence Download

description: A dataset containing 86110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Elasis hirsuta (Kunth) D.R.Hunt, Tradescantia blossfeldiana hort. ex Blossfeld, Tradescantia fluminensis Vell., Tradescantia spathacea Sw., Tradescantia commelinoides Schult. & Schult.f., Tradescantia soconuscana Matuda, Tradescantia poelliae D.R.Hunt, Tradescantia zebrina Bosse, Tradescantia zanonia (L.) Sw., Tradescantia sillamontana Matuda, Tradescantia hirsutiflora Bush, Tradescantia occidentalis (Britton) Smyth, Tradescantia ohiensis Raf., Tradescantia hirsuticaulis Small, Tradescantia tharpii E.S.Anderson & Woodson, Tradescantia virginiana L., Tradescantia ernestiana E.S.Anderson & Woodson, Tradescantia subaspera Ker Gawl., Tradescantia ozarkana E.S.Anderson & Woodson, Tradescantia semisomna Standl., Tradescantia tepoxtlana Matuda, Tradescantia crassifolia Cav., Tradescantia petricola J.R.Grant, Tradescantia hirta D.R.Hunt, Tradescantia brevifolia (Torr.) Rose, Tradescantia buckleyi (I.M.Johnst.) D.R.Hunt, Tradescantia pallida (Rose) D.R.Hunt, Gibasis geniculata (Jacq.) Rohweder, Gibasis linearis (Benth.) Rohweder, Gibasis pellucida (M.Martens & Galeotti) D.R.Hunt, Gibasis venustula (Kunth) D.R.Hunt, Gibasis pulchella (Kunth) Raf., Gibasis hintoniorum B.L.Turner, Gibasis oaxacana D.R.Hunt, Tripogandra glandulosa (Seub.) Rohweder, Tripogandra diuretica (Mart.) Handlos, Tripogandra amplexans Handlos, Tripogandra serrulata (Vahl) Handlos, Tripogandra disgrega (Kunth) Woodson, Callisia gracilis (Kunth) D.R.Hunt, Callisia warszewicziana (Kunth & C.D.Bouché) D.R.Hunt, Callisia repens (Jacq.) L., Callisia gentlei Matuda, Callisia soconuscensis Matuda, Callisia fragrans (Lindl.) Woodson, Callisia cordifolia (Sw.) Andiers. & Woodson, Callisia multiflora (M.Martens & Galeotti) Standl., Callisia graminea (Small) G.C.Tucker, Callisia ornata (Small) G.C.Tucker, Callisia rosea (Vent.) D.R.Hunt, Callisia micrantha (Torr.) D.R.Hunt, Callisia hintoniorum B.L.Turner, Callisia navicularis (Ortgies) D.R.Hunt, Weldenia candida Schult.f., Tinantia anomala (Torr.) C.B.Clarke, Tinantia leiocalyx C.B.Clarke, Tinantia erecta (Jacq.) Fenzl, Tinantia longipedunculata Standl. & Steyerm., Tinantia violacea Rohweder)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 86110 records from 730 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032791-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m96v7u
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Kenya",
 "TaxonKey is Dyschoriste Nees"
 ]
}

 The dataset includes 451 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032792-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.ck8omnuw
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5918741 records)
DOI: 10.34740/kaggle/dsv/9494165
title: World Stock Prices ( Daily Updating )
DOI: 10.15468/dl.6e58vr
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than 5",
 "Year is greater than 2004",
 "Geometry POLYGON ((10.0389972968219006 55.8971600347720781, 10.0389974239708959 55.8971604838799720, 10.0389716699240097 55.8986398987190753, 10.0389723019186334 55.8986421227243113, 10.0389742021257646 55.8986441059969010, 10.0389771599016697 55.8986456265715432, 10.0389808444273090 55.8986465138165443, 10.0389848436831990 55.8986466705690148, 10.0395178698995799 55.8986170643982447, 10.0395205941822887 55.8986167304974373, 10.0399442105179233 55.8985347890337039, 10.0399473889450750 55.8985338555400020, 10.0399499354356934 55.8985324358684323, 10.0399516182862829 55.8985306568762397, 10.0399522914265020 55.8985286779443555, 10.0400189377114764 55.8975581535551171, 10.0400191631257023 55.8975576125126636, 10.0400201342360358 55.8975575063672494, 10.0413925736625611 55.8975564186329024, 10.0413933928179269 55.8975564907789177, 10.0413935170869308 55.8975569506915733, 10.0413678285359698 55.8995045177861201, 10.0413676936802414 55.8995049762957308, 10.0413668733932688 55.8995050425378253, 10.0389577714346068 55.8994847758122830, 10.0389553659402591 55.8994848922538807, 10.0389530491733829 55.8994852766174617, 10.0379979841936233 55.8997048509404522, 10.0379969541815885 55.8997050294512334, 10.0354832382416621 55.9000029392351223, 10.0354822149755396 55.9000029514337768, 10.0354814498836404 55.9000025687892119, 10.0350465637810551 55.8996851744116583, 10.0350461550830943 55.8996847815803406, 10.0350460425608965 55.8996844599418026, 10.0349715232032874 55.8991704303910169, 10.0348746448011177 55.8983973791021214, 10.0348747574812851 55.8983968057700551, 10.0348752219549837 55.8983962905838823, 10.0350138332456229 55.8982934737950927, 10.0350150183252680 55.8982928132741534, 10.0352037907083513 55.8982135456293463, 10.0352046416060166 55.8982132482400189, 10.0368991201320092 55.8977245354237056, 10.0389965181369263 55.8971601599528327, 10.0389972968219006 55.8971600347720781))"
 ]
}

 The dataset includes 68 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032794-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.myq2du
title: Occurrence Download

description: A dataset containing 19748 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canis lupus Linnaeus, 1758",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 19748 records from 200 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032795-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tf9yga
title: Occurrence Download

description: A dataset containing 1030924 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material citation, Specimen, Living Specimen)",
 "Country is one of (South Africa, Lesotho, Namibia)",
 "DatasetKey is one of (Botanical Database of Southern Africa (BODATSA): Botanical Collections, Tropicos MO Specimen Data, Naturalis Biodiversity Center (NL) - Botany, IZIKO South Africa Museum Collection (1800-2013), Royal Botanic Gardens, Kew - Herbarium Specimens)",
 "Month is one of (January, October, November, December, February, March, April)"
 ]
}

 The dataset includes 1030924 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032787-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rddy2w
title: Occurrence Download

description: A dataset containing 3545 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ursus arctos Linnaeus, 1758",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 3545 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032797-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w6srk5
title: Occurrence Download

description: A dataset containing 891 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Nipponia nippon (Temminck, 1835)"
 ]
}

 The dataset includes 891 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032798-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c9yea2
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than 5",
 "Year is greater than 2004",
 "Geometry POLYGON ((10.0389972968219006 55.8971600347720781, 10.0389974239708959 55.8971604838799720, 10.0389716699240097 55.8986398987190753, 10.0389723019186334 55.8986421227243113, 10.0389742021257646 55.8986441059969010, 10.0389771599016697 55.8986456265715432, 10.0389808444273090 55.8986465138165443, 10.0389848436831990 55.8986466705690148, 10.0395178698995799 55.8986170643982447, 10.0395205941822887 55.8986167304974373, 10.0399442105179233 55.8985347890337039, 10.0399473889450750 55.8985338555400020, 10.0399499354356934 55.8985324358684323, 10.0399516182862829 55.8985306568762397, 10.0399522914265020 55.8985286779443555, 10.0400189377114764 55.8975581535551171, 10.0400191631257023 55.8975576125126636, 10.0400201342360358 55.8975575063672494, 10.0413925736625611 55.8975564186329024, 10.0413933928179269 55.8975564907789177, 10.0413935170869308 55.8975569506915733, 10.0413678285359698 55.8995045177861201, 10.0413676936802414 55.8995049762957308, 10.0413668733932688 55.8995050425378253, 10.0389577714346068 55.8994847758122830, 10.0389553659402591 55.8994848922538807, 10.0389530491733829 55.8994852766174617, 10.0379979841936233 55.8997048509404522, 10.0379969541815885 55.8997050294512334, 10.0354832382416621 55.9000029392351223, 10.0354822149755396 55.9000029514337768, 10.0354814498836404 55.9000025687892119, 10.0350465637810551 55.8996851744116583, 10.0350461550830943 55.8996847815803406, 10.0350460425608965 55.8996844599418026, 10.0349715232032874 55.8991704303910169, 10.0348746448011177 55.8983973791021214, 10.0348747574812851 55.8983968057700551, 10.0348752219549837 55.8983962905838823, 10.0350138332456229 55.8982934737950927, 10.0350150183252680 55.8982928132741534, 10.0352037907083513 55.8982135456293463, 10.0352046416060166 55.8982132482400189, 10.0368991201320092 55.8977245354237056, 10.0389965181369263 55.8971601599528327, 10.0389972968219006 55.8971600347720781))"
 ]
}

 The dataset includes 68 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032799-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gftemp
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Juxtacribrilina mutabilis"
 ]
}

 The dataset includes 171 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032800-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbyeeg
title: Occurrence Download

description: A dataset containing 2511 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xenicus gilviventris Pelzeln, 1867"
 ]
}

 The dataset includes 2511 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032801-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc6b32p
title: CCDC 188451: Experimental Crystal Structure Determination

description: Related Article: T.Hamann, K.Wijaya, O.Moers, A.Blaschette, P.G.Jones|2002|Z.Naturforsch.,B:Chem.Sci.|57|1152|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc6p0d8
title: CCDC 198939: Experimental Crystal Structure Determination

description: Related Article: Ya.Z.Voloshin, O.A.Varzatsky, I.I.Vorontsov, M.Yu.Antipin, E.Yu.Tkachenko|2002|Izv.Akad.Nauk SSSR,Ser.Khim.||933|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10118009
title: Improving Automated Code Reviews: Learning From Experience

description: This is the replication package for "Improving Automated Code Reviews: Learning From Experience"

Included contents:

- requirements.txt

- Mining Scripts

- Datasets

- Generated Reviews

- Manual Analysis Pack

- Checkpoints

 

To access CodeReviewer please visit this link:https://github.com/microsoft/CodeBERT/tree/master/CodeReviewer

To fine-tune and evaluate the review comment generation model refer to:

code/sh/finetune-msg.sh

code/sh/test-msg.sh
DOI: 10.5281/zenodo.10118010
title: Improving Automated Code Reviews: Learning From Experience

description: This is the replication package for "Improving Automated Code Reviews: Learning From Experience"
Included contents:
- Mining Scripts
- Datasets
- Generated Reviews
- Manual Analysis Pack
DOI: 10.5281/zenodo.10146583
title: Improving Automated Code Reviews: Learning From Experience

description: This is the replication package for "Improving Automated Code Reviews: Learning From Experience"
Included contents:
- Mining Scripts
- Datasets
- Generated Reviews
- Manual Analysis Pack
DOI: 10.5281/zenodo.10572047
title: Improving Automated Code Reviews: Learning From Experience

description: This is the replication package for "Improving Automated Code Reviews: Learning From Experience"

Included contents:

- requirements.txt

- Mining Scripts

- Datasets

- Generated Reviews

- Manual Analysis Pack

- Checkpoints

 

To access CodeReviewer please visit this link:https://github.com/microsoft/CodeBERT/tree/master/CodeReviewer

To fine-tune and evaluate the review comment generation model refer to:

code/sh/finetune-msg.sh

code/sh/test-msg.sh
DOI: 10.5517/ccdc.csd.cc2gtdxm
title: CCDC 2288541: Experimental Crystal Structure Determination

description: Related Article: Andrey V. Kolos, Yulia V. Nelyubina, Evgeniya S. Podyacheva, Dmitry S. Perekalin|2023|Dalton Trans.|52|17005|doi:10.1039/D3DT03279E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.13844839
title: R scripts for analyzing LiDAR data to assess forest canopy structure and perform Principal Component Analysis (PCA) on derived metrics

description: This repository contains R scripts for analyzing LiDAR data to assess forest canopy structure and perform Principal Component Analysis (PCA) on spectral and LiDAR-derived metrics. The scripts cover LiDAR data processing, canopy height model (CHM) generation, calculation of forest canopy metrics, and PCA analysis.
DOI: 10.5281/zenodo.13844840
title: R scripts for analyzing LiDAR data to assess forest canopy structure and perform Principal Component Analysis (PCA) on derived metrics

description: This repository contains R scripts for analyzing LiDAR data to assess forest canopy structure and perform Principal Component Analysis (PCA) on spectral and LiDAR-derived metrics. The scripts cover LiDAR data processing, canopy height model (CHM) generation, calculation of forest canopy metrics, and PCA analysis.
DOI: 10.15468/dl.2a99zx
title: Occurrence Download

description: A dataset containing 59364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hydrothrix gardneri Hook.f., Heteranthera zosterifolia Mart., Heteranthera seubertiana Solms, Heteranthera dubia (Jacq.) MacMill., Heteranthera rotundifolia (Kunth) Griseb., Heteranthera limosa (Sw.) Willd., Heteranthera oblongifolia Mart. ex Schult. & Schult.f., Eichhornia azurea (Sw.) Kunth, Eichhornia heterosperma Alexander, Eichhornia diversifolia (Vahl) Urb., Eichhornia meyeri A.G.Schulz, Eichhornia paradoxa (Mart. ex Schult. & Schult.f.) Solms, Eichhornia paniculata (Spreng.) Solms, Eichhornia crassipes (Mart.) Solms, Pontederia cordata L., Pontederia sagittata C.Presl, Pontederia rotundifolia L.f., Monochoria cyanea (F.Muell.) F.Muell., Monochoria hastata (L.) Solms, Monochoria vaginalis (Burm.f.) C.Presl, Monochoria korsakowii Regel & Maack)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 59364 records from 708 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032802-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzgmnn
title: Occurrence Download

description: A dataset containing 2515 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hippocampus zosterae Jordan & Gilbert, 1882"
 ]
}

 The dataset includes 2515 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322656-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ibwm45
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cycas L.",
 "BasisOfRecord is Fossil"
 ]
}

 The dataset includes 82 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019265-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3atak2
title: Occurrence Download

description: A dataset containing 940 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hippocampus whitei Bleeker, 1855"
 ]
}

 The dataset includes 940 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322649-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eug7ra
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pristimantis divnae Lehr & von May, 2009"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040457-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.