cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25413/sun.26310676
title: Impacts of the invasive reed Arundo donax on biodiversity at the community-ecosystem level.

description: Arundo donax is an invasive species that mostly impacts on sensitive riparian ecosystems. In California, USA, Arundo worsens flood effects, outcompetes and displaces indigenous plant and animal species, creates fire hazards, and has the potential to alter soil nutrient status. Arundo is also invasive in South Africa, though less is known about its ecology, biology, and impacts. Since California and the Western Cape of South Africa have similar Mediterranean-type climates, we could assume that the impacts of Arundo on ecosystems in California are likely to be similar in the Western Cape, and that control methods used could be extrapolated for use in South Africa.
DOI: 10.25413/sun.26310676.v1
title: Impacts of the invasive reed Arundo donax on biodiversity at the community-ecosystem level.

description: Arundo donax is an invasive species that mostly impacts on sensitive riparian ecosystems. In California, USA, Arundo worsens flood effects, outcompetes and displaces indigenous plant and animal species, creates fire hazards, and has the potential to alter soil nutrient status. Arundo is also invasive in South Africa, though less is known about its ecology, biology, and impacts. Since California and the Western Cape of South Africa have similar Mediterranean-type climates, we could assume that the impacts of Arundo on ecosystems in California are likely to be similar in the Western Cape, and that control methods used could be extrapolated for use in South Africa.
DOI: 10.15468/dl.e2p4k7
title: Occurrence Download

description: A dataset containing 40334 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alternanthera philoxeroides (Mart.) Griseb."
 ]
}

 The dataset includes 40334 records from 427 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001954-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/ozf1cg
title: 211_alisier.3mf

description: file for 3D printer
DOI: 10.5281/zenodo.14833853
title: DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions

description: This dataset contains conformational Representatives of protein structures derived from two sources:



Molecular Dynamics (MD) Simulations (three replicates of 500 microseconds for each entry) – Representative structures were selected based on RMSD clustering, with dynamically chosen cutoffs to retain between 20 to 50 representatives per trajectory.

AlphaFlow-Generated Conformations – A distilled version of AlphaFlow was used to generate 25 conformations per protein.
DOI: 10.5281/zenodo.14833854
title: DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions

description: This dataset contains conformational Representatives of protein structures derived from two sources:



Molecular Dynamics (MD) Simulations (three replicates of 500 microseconds for each entry) – Representative structures were selected based on RMSD clustering, with dynamically chosen cutoffs to retain between 20 to 50 representatives per trajectory.

AlphaFlow-Generated Conformations – A distilled version of AlphaFlow was used to generate 25 conformations per protein.
DOI: 10.5281/zenodo.13849409
title: Antiphospholipid IgG Certified Reference Material ERM®- DA477/IFCC: a tool for aPL harmonization?

description: Dataset associated with the following paper DOI: 10.1515/cclm-2025-0032

This set of raw data cannot be made publicly available as including sensitive information, but might be available to interested researchers upon reasonable requests. Please, forward your request to: c.grossi@auxologico.it
description: Objectives: The Certified Reference Material (CRM) ERM®-DA477/IFCC is a new polyclonal IgG anti-beta2-glycoprotein I (anti-β2GPI) material for the harmonization of the laboratory diagnosis of antiphospholipid syndrome (APS). We evaluated CRM’s ability to represent the heterogeneity of APS patient anti-β2GPI antibodies and to calibrate IgG anti-β2GPI methods.

Methods: We characterized CRM for its reactivity against domain-1, using the QUANTA Flash® β2GPI-domain-1 assay, and against domains-4-5 of β2GPI, and single-domain-deleted β2GPI molecules using in-house ELISAs. We used QUANTA Lite® ELISA, QUANTA Flash® CLIA, and EliATM FEIA methods to evaluate the CRM’s anti-Cardiolipin (anti-CL) activity. Four anti-β2GPI IgG methods (in-house and QUANTA Lite® ELISA, QUANTA Flash® CLIA, and EliATM FEIA) were also used to evaluate the CRM’s calibration efficacy, alongside 133 clinical samples (CSs) and 99 controls.

Results: The CRM showed high anti-domain-1 activity and no anti-domain-4-5 activity at the recommended assay dilution. The domain-dependent-β2GPI reactivity profiles were comparable with full-blown APS. There was acceptable dilution linearity for anti-CL assays with R2 ranging from 0.957 to 0.997. For the four anti-β2GPI IgG assays, calibration with the CRM led to a good comparability of the average result of CSs for two of the assays. New cut-offs calculated from this work improved comparability in quantitative results between three of the assays: 85% concordance with CRM compared to 66% concordance with assay-specific-calibration. 

Conclusions: The CRM is representative of patient anti-β2GPI/CL heterogeneity and should improve anti-β2GPI IgG method harmonization. However, the level of achievable method harmonization is affected by differences in the selectivity among the assays.
DOI: 10.5281/zenodo.13849410
title: Antiphospholipid IgG Certified Reference Material ERM®- DA477/IFCC: a tool for aPL harmonization?

description: Dataset associated with the following paper DOI: 10.1515/cclm-2025-0032

This set of raw data cannot be made publicly available as including sensitive information, but might be available to interested researchers upon reasonable requests. Please, forward your request to: c.grossi@auxologico.it
description: Objectives: The Certified Reference Material (CRM) ERM®-DA477/IFCC is a new polyclonal IgG anti-beta2-glycoprotein I (anti-β2GPI) material for the harmonization of the laboratory diagnosis of antiphospholipid syndrome (APS). We evaluated CRM’s ability to represent the heterogeneity of APS patient anti-β2GPI antibodies and to calibrate IgG anti-β2GPI methods.

Methods: We characterized CRM for its reactivity against domain-1, using the QUANTA Flash® β2GPI-domain-1 assay, and against domains-4-5 of β2GPI, and single-domain-deleted β2GPI molecules using in-house ELISAs. We used QUANTA Lite® ELISA, QUANTA Flash® CLIA, and EliATM FEIA methods to evaluate the CRM’s anti-Cardiolipin (anti-CL) activity. Four anti-β2GPI IgG methods (in-house and QUANTA Lite® ELISA, QUANTA Flash® CLIA, and EliATM FEIA) were also used to evaluate the CRM’s calibration efficacy, alongside 133 clinical samples (CSs) and 99 controls.

Results: The CRM showed high anti-domain-1 activity and no anti-domain-4-5 activity at the recommended assay dilution. The domain-dependent-β2GPI reactivity profiles were comparable with full-blown APS. There was acceptable dilution linearity for anti-CL assays with R2 ranging from 0.957 to 0.997. For the four anti-β2GPI IgG assays, calibration with the CRM led to a good comparability of the average result of CSs for two of the assays. New cut-offs calculated from this work improved comparability in quantitative results between three of the assays: 85% concordance with CRM compared to 66% concordance with assay-specific-calibration. 

Conclusions: The CRM is representative of patient anti-β2GPI/CL heterogeneity and should improve anti-β2GPI IgG method harmonization. However, the level of achievable method harmonization is affected by differences in the selectivity among the assays.
DOI: 10.57745/kisd7q
title: 73_chene.3mf

description: :unav
DOI: 10.15468/dl.h8vxx2
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nanocnide pilosa Migo"
 ]
}

 The dataset includes 142 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001955-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a6fqrd
title: Occurrence Download

description: A dataset containing 9478 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ranunculus muricatus L.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 9478 records from 291 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001956-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/tzcbrhd2ny.2
title: Phonocardiogram Signal Dataset Paired with Blood Pressure Measurements

description: This dataset comprises phonocardiogram (PCG) signals, blood pressure measurements, and additional demographic collected from 78 participants under controlled conditions. The data were recorded using medical-grade digital stethoscope and automated blood pressure monitor to ensure precision and consistency.
DOI: 10.17632/zn2fvdgywb.1
title: Datasets to supports: 'Non-monotonic impact of erosion on solute dispersion in porous media'

description: Datasets to supports: 'Non-monotonic impact of erosion on solute dispersion in porous media'
DOI: 10.21227/qvr7-n418
title: Car Hacking: Attack Defense Challenge 2020 Dataset

description: This is the dataset provided and collected while Car Hacking: Attack amp; Defense Challenge in 2020. We are the main organizer of the competition along with Culture Makers and Korea Internet amp; Security Agency. We are very proud of releasing these valuable datasets for all security researchers for free.The competition aimed to develop attack and detection techniques of Controller Area Network (CAN), a widely used standard of in-vehicle network. The target vehicle of competition was Hyundai Avante CN7.Therefore, the dataset is a CAN network traffic of Avante CN7 including normal messages and attack messages. The dataset contains1) Preliminary round train/test dataset2) Final round dataset of host's attack session
DOI: 10.5067/aqua/modis/l2/oc/2018
title: MODIS-Aqua Level 2 Ocean Color Data Version R2018.0
DOI: 10.5067/measures/swdb/data304
title: SeaWiFS Deep Blue Aerosol Optical Depth and Angstrom Exponent Monthly Level 3 Data Gridded at 1.0 Degree V4.0
DOI: 10.5067/viirs/cldprop_d3_viirs_snpp.011
title: VIIRS/SNPP Cloud Properties Level 3 daily, 1x1 degree grid
DOI: 10.5281/zenodo.10123598
title: evapoRe

description: This repository provides access to a collection of evapotranspiration datasets, enabling researchers, scientists, and practitioners to conveniently access and utilize these valuable resources. The repository ensures easy retrieval of evapotranspiration data by providing clear documentation and instructions for downloading the datasets. With a diverse range of evapotranspiration data available, users can explore various spatial and temporal resolutions tailored to their specific research needs. This repository aims to facilitate the integration of evapotranspiration data into diverse applications, such as hydrological modeling, climate studies, and agricultural research, fostering scientific advancements and data-driven decision-making.
DOI: 10.5281/zenodo.11392152
title: El Niño Enhances Exposure to Humid Heat Extremes with Regionally Varying Impacts during Eastern vs Central Pacific Events

description: Humid heat extremes, characterized by high wet bulb temperature (Tw), pose significant health risks. While strong El Niño events are known to affect the frequency of extreme Tw days, the distinct impacts of Central Pacific (CP) and Eastern Pacific (EP) El Niño events remain understudied. Using a 12-member CMIP6 ensemble at discrete global warming targets (+1.5˚C, 2˚C, 3˚C, 4˚C), this study shows progressively enhanced humid heat exposure during EP events primarily in Mainland Southeast Asia, while South Asia experiences regionally opposing effects from EP and CP events. EP and CP events expose distinct, regionally varying areas to dangerous Tw, yet both significantly amplify population and area exposure to humid heat extremes at all global warming levels. This amplification surpasses the impact of an additional degree of global warming, highlighting El Niño’s compounding effect on heat stress threats across warmer climates.
DOI: 10.5281/zenodo.13357924
title: Simulation Data of the ICME Effect on the Martian Bow Shock

description: Simulation Data of the ICME Effect on the Martian Bow Shock
DOI: 10.5281/zenodo.13774026
title: Repository of "How Stress Biaxiality Controls Crack Morphology and Apparent Fracture Energy of Dikes and Sills"

description: This repository contains the dataset of the future publication "How Stress Biaxiality Controls Crack Morphology and Apparent Fracture Energy of Dikes and Sills". It contains:



1 file recapitulating sample dimensions and informations on the tests.

12 “raw” mechanical results of experiments on Carrara marble (6 WST — 3 dry/3 saturated tests, 6 MRT — 3 dry/3 saturated tests) with minimal filtering.

12 “computed” mechanical results of experiments on Carrara marble (6 WST — 3 dry/3 saturated tests, 6 MRT — 3 dry/3 saturated tests) with the use of the compliance method.

2 compressed and stitched back-scattered SEM scans imaging the crack tip in xz direction after crack arrest on WST and MRT.

5 stitched back-scattered SEM scans imaging the crack in yz direction on WST at 20, 40, 60 mm MRT at 10, 25 mm of crack propagation.


For more details and information about the dataset, do not hesitate to contact me at antoine.guggisberg@epfl.ch
DOI: 10.5281/zenodo.13790211
title: Unveiling Energy Conversions of the Venus Atmosphere by the Bred Vectors

description: This is the data for the paper: Unveiling Energy Conversions of the Venus Atmosphere by the Bred Vectors

BV-energy-equation.ipynb: script for plotting

solar-position.csv: solar positions

control-run.tar.gz: control run data

perturbed-run.tar.gz: perturbed run data
DOI: 10.5281/zenodo.14002921
title: Processed data of "Observations of Ring Current Proton Fast Local Loss Associated with Deepening Local Minimum in Phase Space Density in Earth's Inner Magnetosphere"

description: The dataset includs the processed observation data of "Observations of Ring Current Proton Fast Local Loss Associated with Deepening Local Minimum in Phase Space Density in Earth’s Inner Magnetosphere". *.sav files are the phase space densities of protons and the corresponding adiabatic invariants (μ, K, and L*) which are calculated under the T89D magnetic field model (using the observation data measured by the RBSPICE on the Van Allen Probes from 24th to 26th Jun 2017), which are used to plot Figure 1. The data in Processed data for Figures 2-5.zip are the processed data for Figures 2-5.
DOI: 10.5281/zenodo.14786975
title: Dataset: Observations and Simulations of Bora episode in the Vipava valley

description: This dataset contains lidar-based observational data and numerical simulation results related to orography-induced atmospheric waves observed during a Bora wind event in the Vipava Valley, Slovenia, on January 25, 2019. The dataset supports the findings in the research article "Orography-Induced Atmospheric Small-Scale Waves During Bora Using Lidar Observations and Numerical Simulations", where two lidar systems were used to capture small-scale atmospheric wave dynamics, and high-resolution computational fluid dynamics (CFD) simulations were performed to complement the observations.
DOI: 10.6084/m9.figshare.26054158
title: Australian Heritage for the North Lhasa Terrane

description: <b>此文件包括：</b>表 S1 至 S4
DOI: 10.15468/dl.9bc88r
title: Occurrence Download

description: A dataset containing 7022 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dissostichus mawsoni Norman, 1937"
 ]
}

 The dataset includes 7022 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001957-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rbepyb
title: Occurrence Download

description: A dataset containing 6653 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amaranthus palmeri S.Watson"
 ]
}

 The dataset includes 6653 records from 284 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001958-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48804/jucqr4
title: Fast face-selective responses in prefrontal face patches of the macaque.

description: "This dataset includes data files containing spike rates for both the main stimulus set and the receptive field. The spike rate data is provided in two formats: binned in 10 ms intervals or averaged over larger response windows. Additionally, the accompanying code is provided to generate all figures and perform statistical analyses as presented in the associated publication."
DOI: 10.15468/dl.2bq5a6
title: Occurrence Download

description: A dataset containing 596 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stenus fuscipes Gravenhorst, 1802",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 596 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001959-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6hgupr
title: Occurrence Download

description: A dataset containing 1973 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ophiopogon japonicus (Thunb.) Ker Gawl.",
 "Year 1970-2000"
 ]
}

 The dataset includes 1973 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001960-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gy4za9
title: Occurrence Download

description: A dataset containing 695 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ranunculus psilostachys Griseb.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 695 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001961-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6skn6e
title: Occurrence Download

description: A dataset containing 229 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((113.50742790073859 24.15595858514487,117.50742790073859 24.15595858514487,117.50742790073859 28.15595858514487,113.50742790073859 28.15595858514487,113.50742790073859 24.15595858514487))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tarenna mollissima (Hook. & Arn.) B.L.Rob.",
 "Year 1929-2024"
 ]
}

 The dataset includes 229 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001963-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ud5tr
title: Occurrence Download

description: A dataset containing 229 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((113.50742790073859 24.15595858514487,117.50742790073859 24.15595858514487,117.50742790073859 28.15595858514487,113.50742790073859 28.15595858514487,113.50742790073859 24.15595858514487))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tarenna mollissima (Hook. & Arn.) B.L.Rob.",
 "Year 1929-2024"
 ]
}

 The dataset includes 229 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001962-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f5auhj
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Arachniodes cavaleriei (Christ) Ohwi",
 "Year 1970-2000"
 ]
}

 The dataset includes 45 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001964-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14985076
title: GPP estimation by transfer learning with combined solar-induced chlorophyll fluorescence and eddy covariance data

description:  

This dataset provides 8-day global gross primary production (GPP) at 0.05° latitude by 0.05° longitude for 2001-2023.

(1) Model description and performance

n this study, a transfer learning (SIFEC-TL) method is proposed to obtain global long-time-series high-accuracy GPP products by combining constrained SIF and EC data. SIF data is used as the source domain to provide spatial information for pre-training, and EC GPP is used as the target domain to provide accurate GPP for fine-tuning of the machine learning model. To validate the performance of SIFEC-TL, the results are compared with those of machine learning models that use only SIF or EC GPP alone (SIFML and ECML). The results show that the SIFEC-TL model has higher temporal consistency and stronger spatial scalability than the SIFML and ECML models, which effectively addresses the underestimation/overestimation of high/low GPP values in the SIFML and ECML models.

(2) Dataset information

Non-vegetated areas in the dataset were filled using nan.

Data format: TIFF

Temporal Resolution: 8-Day

Spatial Resolution: 0.05°

Temporal Extent: 2001 to 2023

Spatial Extent: Global

Unit: g C m-2 8-day-1