cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10885646
title: Dissolved organic carbon concentrations, pH and conductivity of water flowing from eroding and restored peatland catchments

description: Water was collected  from gullies within an eroding blanket bog. The bog is on a large high-altitude plateau blanket bog in the eastern part of the Cairngorms National Park, Scotland, UK (56.93° N, − 3.16° E, 642 m asl). 

At Balmoral DOC concentrations were measured from water flowing through six v-notch weirs. Three weirs measured drainage from mini catchments that had undergone restoration and three measured drainage from  degraded mini-catchments with multiple upstream erosion gullies and bare peat. Restoration at this site included reprofiling and vegetating (turving) of peat haggs, bunding using coir logs to ‘slow the  flow’ and encourage Sphagnum growth, and mulching of areas of bare peat with locally sourced vegetation.

The six V-notch weirs conforming to British Standard 3680:Part 4A:1981 (British Standards Institute, 1981) were constructed from 18 mm marine plywood. Initially 90°, 65 l s-1, V-notch plates cut from 1 mm aluminium plate were fitted. Weirs were installed at sites identified in the experimental design phase. Each weir was embedded into the peat by 20cm vertically and 20-40cm horizontally and supported by two posts embedded 60-80cm into the peat. Where required the weirs were extended to ensure that there were no leaks between the bank and the weir. A stilling well equipped with a capacitive water logger was installed at each weir. The stilling wells were manufactured from 800 mm long, 43 mm diameter, ABS waste pipe tubing. After a period of evaluation (November 2020 – May 2021) the 90°, 65 l/s, V-notch plates were replaced with 28.4°, 15 l s-1 plates in order to improve low-flow (<6cm head) accuracy. The water loggers were set to record water levels every 10 minutes. Raw data was downloaded every 6 months and processed in a Python script using the BS 3680 formula.

Water samples were taken from each weir (if water was present behind the weir on the sampling day)  over a two year period from September 2021 to September 2023  After samples are delivered to the laboratory the protocol for wet chemistry analysis follows the protocol of the National Water Inventory of Scotland (NWIS) project. pH, conductivity and turbidity were then measured on all samples before a 100ml subsample was filtered through a 0.45 µm membrane. The remaining unfiltered sample is stored in a cold room and the filter membrane was retained, air dried and stored in plastic bags, for potential further analysis. The filtered water was analysed for DOC on a Skalar TOC analyser (Norcross, USA).
DOI: 10.6075/j0gx4bs2
title: Our Tax Dollars and the Future of Data: FAIR Data Ecosystems and AI-Readiness. In San Diego Supercomputer Center (SDSC) Research Data Services Materials Collection

description: This is a slide deck for an invited talk for the Gulf Coast Consortium, Houston, TX. This talk reviews the FAIR Data Principles, frames the evolving FAIR data ecosystem in the U.S. and considers AI-readiness in the context of academic research.
DOI: 10.15468/dl.pa494m
title: Occurrence Download

description: A dataset containing 442 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Didymelaceae"
 ]
}

 The dataset includes 442 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045275-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c7558g
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Diegodendraceae"
 ]
}

 The dataset includes 101 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045278-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6075/j07h1jtj
title: DeCODER Town Hall: Use Case Application for a Democratized Cyberinfrastructure for Open Discovery to Enable Research. In San Diego Supercomputer Center (SDSC) Research Data Services Materials Collection

description: This file is the slide deck that was used at the DeCODER Town Hall at the 2023 American Geophysical Union (AGU) Meeting.
DOI: 10.15468/dl.gbkbs3
title: Occurrence Download

description: A dataset containing 6919 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Didymochlaenaceae"
 ]
}

 The dataset includes 6919 records from 224 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045277-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10879251
title: Interim model output of estimated bare peat/erosion density in Aberdeenshire and Angus at 1m resolution.

description: This dataset contains the estimated unit density of peat erosion accross Aberdeenshire and Angus at 1m resolution. These outputs are derived from high resolution aerial imagery using the PeatNet pipeline for predicting the location and extent of peatland degradation features. This output was created to estimate the particulate organic carbon (POC) emissions from eroding peat based on multiple scenarios.
DOI: 10.6075/j03r0t37
title: FARR: FAIR in ML, AI Readiness, & Reproducibility v2 Postcard. In San Diego Supercomputer Center (SDSC) Research Data Services Materials Collection

description: This postcard was distributed at conferences to disseminate project objectives and to promote awareness of AI reproducibility and ways to document implementation factors of AI-based research.
DOI: 10.15468/dl.9tzagj
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((26.04041 44.3688,26.17413 44.3688,26.17413 44.51337,26.04041 44.51337,26.04041 44.3688))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Emberiza hortulana Linnaeus, 1758"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045279-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ky4qcf
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Telmatobius culeus (Garman, 1876)"
 ]
}

 The dataset includes 208 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045283-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9mz96c
title: Occurrence Download

description: A dataset containing 559447 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Rumex acetosella L.)"
 ]
}

 The dataset includes 559447 records from 2653 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045206-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sv24bq
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083402-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.86ee9a
title: Occurrence Download

description: A dataset containing 11403 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Mesoleuca albicillata (Linnaeus, 1758)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 11403 records from 169 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083403-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u5ey8h
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trogoderma granarium Everts, 1898)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900",
 "BasisOfRecord is one of (Specimen)",
 "Country is one of (United States of America, Kenya, Netherlands, United Kingdom of Great Britain and Northern Ireland)",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than or equal to 50000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 89 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083405-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ssq85z
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083404-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3mhjxm
title: Occurrence Download

description: A dataset containing 61432 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Alsophila aescularia (Denis & Schiffermüller), 1775",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 61432 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083406-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fqxfmw
title: Occurrence Download

description: A dataset containing 6055 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus palustris Mill."
 ]
}

 The dataset includes 6055 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083408-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.96cd7b
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083407-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/f71g0jgn
title: Greater White-Fronted Goose Genetic Data, Circumpolar, 1988-2009

description: This data set describes nuclear microsatellite genotypes derived from eight autosomal loci (BCA6, BCA9, BCA11, BCA5, CRG, OXY13, TSP1.20.09 and TSP1.20.46) and a 366 base pair portion of the mitochondrial control region. A total of 665 Greater White-fronted Geese were examined by genotyping and 518 by sequencing with samples coming from its circumpolar range representing multiple flyways (Midcontinent, Pacific, Greenland, Palearctic). The sex of most samples was determined in the field by morphology or cloacal examination.
DOI: 10.15468/dl.j4ap5b
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083410-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ts8c8n
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083411-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23719/1531682
title: A database of chemical absorption in human skin with mechanistic modeling applications

description: Data Records

The database is deposited on the Dryad Digital Repository as a series of Microsoft Excel files prepared to be used in coding. It is presented as individual files for each layer (epidermis, stratum corneum, dermis) and chemical type (fragrance related, non-volatile, hydrocortisone). Additional spreadsheets containing all information, the chemical descriptors, and time course data are also included along with a notated and color-coded file which is condensed and not recommended for coding.

Data Validation

The collection of experimental data was collected from its corresponding publication and the additional features were collected from the EPA CompTox Chemicals Dashboard (version 2.2.0), Padel-descriptor, as well as additional literature. The database was curated by a team of two and reviewed by an additional team member in order to ensure that the data were accurately reported with correct units. The dermal absorption coefficients were collected from peer-reviewed publications and included in the database, taking into account any additional supplementary materials and corrections.
DOI: 10.23719/1531659
title: Development and validation of CYP26A1 inhibition assay for high-throughput screening

description: Dataset for Sakamuru, S., Ma, D., Pierro, J. D., Baker, N. C., Kleinstreuer, N., Cali, J. J., Knudsen, T. B., & Xia, M. (2024). Development and validation of CYP26A1 inhibition assay for high-throughput screening. Biotechnology Journal, 19, e2300659. https://doi.org/10.1002/biot.202300659
DOI: 10.15468/dl.nt8dmz
title: Occurrence Download

description: A dataset containing 5817 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus taeda L."
 ]
}

 The dataset includes 5817 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083412-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xv7us3
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083413-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive145707.20230509.8
title: Actinomyces viscosus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145708.20230509.8
title: Plesiomonas shigelloides

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145709.20230509.8
title: Plesiomonas shigelloides

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145710.20230509.8
title: Actinotignum schaalii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145711.20230509.8
title: Rhodococcus erythropolis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.10512936
title: NUTRISHIELD_Bile acids_Results_Study

description: Bile acids measurements of patients participating in the NUTRISIHELD study I
DOI: 10.13145/bacdive145712.20230509.8
title: Streptobacillus moniliformis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145713.20230509.8
title: Streptococcus agalactiae

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145714.20230509.8
title: Moraxella osloensis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145715.20230509.8
title: Campylobacter coli

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145716.20230509.8
title: Campylobacter coli

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145717.20230509.8
title: Campylobacter lari

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145718.20230509.8
title: Campylobacter lari

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145719.20230509.8
title: Campylobacter jejuni

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145720.20230509.8
title: Campylobacter jejuni

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145721.20230509.8
title: Campylobacter jejuni

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145722.20230509.8
title: Campylobacter jejuni

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145723.20230509.8
title: Campylobacter jejuni

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145724.20230509.8
title: Shigella flexneri

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145725.20230509.8
title: Shigella flexneri

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145726.20230509.8
title: Shigella dysenteriae

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145727.20230509.8
title: Shigella flexneri

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145728.20230509.8
title: Shigella flexneri

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145729.20230509.8
title: Clostridium paraputrificum

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145730.20230509.8
title: Escherichia coli

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive145731.20230509.8
title: Escherichia coli

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.