cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.z55r3x
title: Occurrence Download

description: A dataset containing 4394 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aplysina",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-6.6 29.26705, -6.6 50.94, 40.81373 50.94, 40.81373 29.26705, -6.6 29.26705))",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Material sample)"
 ]
}

 The dataset includes 4394 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000153-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/4wmr2-vk659
title: Hyphomonas session5 27KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2008-11-18</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media...</p>
<strong>Sample Preparation:</strong> C-flat grid, 10nm gold, 100% humidity...</p>
  jsa2008-11-18-7_slicer9517.jpg: Hyphomonas neptunium  .  DNA ?
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-11-18-7/rawdata/</p>08nov18a_b620_1_010.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-11-18-7/rawdata/08nov18a_b620_1_010.mrc"
        > <i class="download icon"></i> Download </a></p>

        08nov18a_b620_1_010_1k.rec,  Reconstruction (Pixel Size 1.548 nm), 98.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-11-18-7/3dimage_5819/08nov18a_b620_1_010_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.hw5zan
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aplocheilichthys lacustris, Lacustricola lacustris, Aplocheilichthys macrurus, Lacustricola macrurus, Aplocheilichthys maculatus, Lacustricola maculatus, Aplocheilichthys mediolateralis, Lacustricola mediolateralis, Aplocheilichthys nigrolateralis, Lacustricola nigrolateralis, Aplocheilichthys omoculatus, Lacustricola omoculatus, Aplocheilichthys rudolfianus, Micropanchax rudolfianus, Aplocheilichthys spilauchen, Aplocheilichthys usanguensis, Lacustricola usanguensis, Aplocheilichthys vitschumbaensis, Lacustricola vitschumbaensis, Aplocheilus panchax, Apricaphanius saourensis, Archiaphyosemion guineense, Aristochromis christyi, Arius africanus, Arius festinus, Arius gigas, Arius latiscutatus, Arius madagascariensis, Arius uncinatus, Arnoglossus imperialis, Arnoldichthys spilopterus, Asprotilapia leptura, Xenotilapia leptura, Astatoreochromis alluaudi, Astatoreochromis straeleni, Astatoreochromis vanderhorsti, Astatotilapia bloyeti, Astatotilapia burtoni, Astatotilapia calliptera, Astatotilapia desfontainii, Astatotilapia paludinosa, Haplochromis paludinosus, Astatotilapia stappersii, Astatotilapia tweddlei, Atherina boyeri, Atherina caspia, Atherinomorus duodecimalis, Atopochilus chabanaudi, Atopochilus christyi, Atopochilus macrocephalus, Atopochilus mandevillei, Atopochilus pachychilus, Atopochilus savorgnani, Atopochilus vogti, Atopodontus adriaensi, Auchenoglanis biscutatus, Auchenoglanis occidentalis, Aulonocara aquilonium, Aulonocara auditor, Aulonocara baenschi, Aulonocara brevinidus, Aulonocara brevirostre, Aulonocara ethelwynnae, Aulonocara gertrudae, Aulonocara guentheri, Aulonocara hueseri, Aulonocara jacobfreibergi, Aulonocara kandeense, Aulonocara kandeensis, Aulonocara koningsi, Aulonocara korneliae, Aulonocara maylandi, Aulonocara nyassae, Aulonocara rostratum, Aulonocara saulosi, Aulonocara stonemani, Aulonocara stuartgranti, Aulonocara trematocephalum, Aulonocranus dewindti, Aurigequula fasciata, Auriglobus modestus, Austroglanis barnardi, Austroglanis gilli, Austroglanis sclateri, Awaous aeneofuscus, Awaous bustamantei, Awaous commersoni, Awaous lateristriga, Awaous macrorhynchus, Bagrus bajad, Bagrus caeruleus, Bagrus degeni, Bagrus docmak, Bagrus filamentosus, Bagrus lubosicus, Bagrus meridionalis, Bagrus orientalis, Bagrus ubangensis, Bagrus urostigma)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((-23.6874 16.958,-24.4615 17.1985,-24.6665 17.5286,-25.0075 17.6984,-25.6349 17.4955,-25.8608 17.0483,-25.642 16.5416,-24.4834 16.006,-23.7746 16.1142,-23.5201 16.4576,-23.6874 16.958))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005850-250827131500795/datasets/export for details.
DOI: 10.22002/g3q6r-r7x15
title: spore24

description: sporulating cell .
description: <strong>Tilt Series Date:</strong> 2008-07-02</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson grew the cells</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Anaerobic growth on CO2+glu</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, Au added to cells prior to freezing, no BSA.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-02-24/rawdata/</p>spore24.mrc,  Tilt Series (Pixel Size 0.961 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-02-24/rawdata/spore24.mrc"
        > <i class="download icon"></i> Download </a></p>

        spore24_part122_34.rec,  Reconstruction (Pixel Size 1.922 nm), 891.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-02-24/3dimage_26125/spore24_part122_34.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/4vr04-kny08
title: spore10

description: sporulating cell .
description: <strong>Tilt Series Date:</strong> 2008-07-02</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson grew the cells</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Anaerobic growth on CO2+glu</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-02-9/rawdata/</p>spore10.mrc,  Tilt Series (Pixel Size 0.961 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-02-9/rawdata/spore10.mrc"
        > <i class="download icon"></i> Download </a></p>

        spore10_part122_8.rec,  Reconstruction (Pixel Size 1.922 nm), 891.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-07-02-9/3dimage_26136/spore10_part122_8.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.xgdzrv
title: Occurrence Download

description: A dataset containing 91523 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Hylotelephium telephium"
 ]
}

 The dataset includes 91523 records from 843 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005798-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15602629
title: Potentials of Mean Force for Solutes in mW water

description: Potentials of Mean Force for Solutes in mW water





The repository contains the main raw results of the calculation of the potential of mean force between spherical solutes in mW water using well-tempered metadynamics.


The simulations were performed using LAMMPS+PLUMED with the mW water model. The solute is modelled as a spherical particle with repulsive solute-solute interaction and Morse (with large cutoff) solute-water interactions.

 

The potential of mean force is calculated for both the case when the solute water interaction is purely repulsive (hard solute) and when it is attractive (attractive solute). The results are stored in the `BIAS...` directories, where the directory name corresponds to the parameters used for the metadynamics simulation.


PLUMED is used to perform the metadynamics simulations, and the input files for equilibration and PMF calculations are provided in each directory.
DOI: 10.5281/zenodo.15602630
title: Potentials of Mean Force for Solutes in mW water

description: Potentials of Mean Force for Solutes in mW water





The repository contains the main raw results of the calculation of the potential of mean force between spherical solutes in mW water using well-tempered metadynamics.


The simulations were performed using LAMMPS+PLUMED with the mW water model. The solute is modelled as a spherical particle with repulsive solute-solute interaction and Morse (with large cutoff) solute-water interactions.

 

The potential of mean force is calculated for both the case when the solute water interaction is purely repulsive (hard solute) and when it is attractive (attractive solute). The results are stored in the `BIAS...` directories, where the directory name corresponds to the parameters used for the metadynamics simulation.


PLUMED is used to perform the metadynamics simulations, and the input files for equilibration and PMF calculations are provided in each directory.
DOI: 10.15468/dl.c8xh9d
title: Occurrence Download

description: A dataset containing 311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Madagascar",
 "TaxonKey is Dalbergia peltieri Bosser & R.Rabev"
 ]
}

 The dataset includes 311 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022749-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6mufub
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Arachis seridoensis Valls, C.E.Simpson, Krapov. & R.Veiga"
 ]
}

 The dataset includes 10 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022751-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d94ckg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micralestes acutidens (Peters, 1852)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.1586 -33.5889,28.2048 -32.9007,25.5395 -32.9007,25.5395 -34.1098,25.6468 -34.1222,25.7787 -34.0734,25.7098 -33.9109,25.8639 -33.797,26.4806 -33.8473,27.1586 -33.5889))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022752-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15602688
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250605p Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250605p Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.15602689
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250605p Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250605p Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.15468/dl.wbvqdj
title: Occurrence Download

description: A dataset containing 1095 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callianthe rufinerva (A.St.-Hil.) Donnell"
 ]
}

 The dataset includes 1095 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022750-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.43hseb
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dimorphandra exaltata)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 48 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001012-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nf3we4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Syringa persica",
 "Country is Armenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001013-250827131500795/datasets/export for details.
DOI: 10.15468/dl.2phsrs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Syringa persica",
 "Country is Croatia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001015-250827131500795/datasets/export for details.
DOI: 10.15468/dl.tq36ux
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Syringa persica",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 74 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001016-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5883/ds-bgmessor
title: Towards delimiting the diversity of Messor ants in Bulgaria using molecular data

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.15468/dl.gp6g2t
title: Occurrence Download

description: A dataset containing 14095 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lymantria dispar",
 "Country is Canada",
 "HasCoordinate is true",
 "Year is greater than or equal to 2012"
 ]
}

 The dataset includes 14095 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001014-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tp6gxm
title: Occurrence Download

description: A dataset containing 83588 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coscoroba coscoroba"
 ]
}

 The dataset includes 83588 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000940-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57hk89
title: Occurrence Download

description: A dataset containing 35697 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Linaria alpina"
 ]
}

 The dataset includes 35697 records from 270 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001017-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pxvtfm
title: Occurrence Download

description: A dataset containing 4512 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Noctuidae [GBIF Backbone Taxonomy])",
 "BasisOfRecord is one of (Material sample, Specimen, Occurrence evidence)"
 ]
 }
 ]
}

 The dataset includes 4512 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001019-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gssdkc
title: Occurrence Download

description: A dataset containing 1687186 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Centaurea solstitialis, Centaurea stoebe, Centaurea virgata, Centaurium erythraea, Centaurium pulchellum, Centella asiatica, Centranthus ruber, Centratherum punctatum, Centrosema molle, Centrosema pubescens, Cerastium arvense, Cerastium fontanum, Cerastium, Cerastium glomeratum, Cerastium holosteoides, Cerastium nemorale, Cerastium tomentosum, Ceratocephala testiculata, Ceratophyllum demersum, Ceratophyllum submersum)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 1687186 records from 3677 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000997-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e230801
title: Data and Code for: Optimizing Electric Vehicle Infrastructure

description: This replication package reproduces the main quantitative results of the journal article "Optimizing Electric Vehicle Infrastructure", AEA Papers and Proceedings. It includes relevant code, public data inputs, and output files to replicate Figure 1(b) and associated welfare calculations.<br>
DOI: 10.3886/e230801v1
title: Data and Code for: Optimizing Electric Vehicle Infrastructure

description: This replication package reproduces the main quantitative results of the journal article "Optimizing Electric Vehicle Infrastructure", AEA Papers and Proceedings. It includes relevant code, public data inputs, and output files to replicate Figure 1(b) and associated welfare calculations.<br>
DOI: 10.6084/m9.figshare.29236700
title: Supplementary dataset for "Heterologous plastoquinone production using a newly identified O2-dependent cyanobacterial hydroxylase", Dataset S2: Phylogenies and alignments

description: This archive contains all the Multiple Sequence Alignments (MSA) and phylogenies (Newick format) realized for the study "Heterologous plastoquinone production using a newly identified O2-dependent cyanobacterial hydroxylase", submitted to <i>The FEBS</i><i> Journal</i>.Authors' list: Morgane Roger-Margueritat, Margot Beltran, Juliette Schnoebelen, Laura Flandrin, Wafa Rezali, Eline Michel, Sophie S. Abby, Fabien PierrelFor the species tree (fig3) obtained by concatenation of 41 markers or COGs, the 41 COG alignements and the concatenated tree are available in this archive.For the tree with more than 1 iteration (figS1 and figS2), the tree are numbered in order of their appearance in the corresponding figure.
DOI: 10.6084/m9.figshare.29236700.v2
title: Supplementary dataset for "Heterologous plastoquinone production using a newly identified O2-dependent cyanobacterial hydroxylase", Dataset S2: Phylogenies and alignments

description: This archive contains all the Multiple Sequence Alignments (MSA) and phylogenies (Newick format) realized for the study "Heterologous plastoquinone production using a newly identified O2-dependent cyanobacterial hydroxylase", submitted to <i>The FEBS</i><i> Journal</i>.Authors' list: Morgane Roger-Margueritat, Margot Beltran, Juliette Schnoebelen, Laura Flandrin, Wafa Rezali, Eline Michel, Sophie S. Abby, Fabien PierrelFor the species tree (fig3) obtained by concatenation of 41 markers or COGs, the 41 COG alignements and the concatenated tree are available in this archive.For the tree with more than 1 iteration (figS1 and figS2), the tree are numbered in order of their appearance in the corresponding figure.
DOI: 10.6084/m9.figshare.29236700.v1
title: Supplementary dataset for "Heterologous plastoquinone production using a newly identified O2-dependent cyanobacterial hydroxylase", Dataset S2: Phylogenies and alignments

description: This archive contains all the Multiple Sequence Alignments (MSA) and phylogenies (Newick format) realized for the study "Heterologous plastoquinone production using a newly identified O2-dependent cyanobacterial hydroxylase", submitted to <i>The FEBS</i><i> Journal</i>.Authors' list: Morgane Roger-Margueritat, Margot Beltran, Juliette Schnoebelen, Laura Flandrin, Wafa Rezali, Eline Michel, Sophie S. Abby, Fabien PierrelFor the species tree (fig3) obtained by concatenation of 41 markers or COGs, the 41 COG alignements and the concatenated tree are available in this archive.For the tree with more than 1 iteration (figS1 and figS2), the tree are numbered in order of their appearance in the corresponding figure.