cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13144/lil-1285
title: État civil - Fichier détail Naissances - 2017

description: Le fichier annuel des naissances est le résultat de l'exploitation des bulletins d'état civil envoyés par les mairies ayant enregistré des naissances en France métropolitaine, dans les DOM (Guadeloupe, Martinique, Guyane, La Réunion), et depuis 2014 à Mayotte. À partir de 2015, les fichiers détail n'intègrent plus les données enregistrées à Saint-Martin, Saint-Barthélemy et Saint-Pierre-et-Miquelon, afin d'être cohérentes avec l'ensemble des données diffusées sur l'état civil.Depuis 2010, le fichier ne contient plus les bulletins d'enfants sans vie. Il comprend les bulletins de naissances (enfants nés vivants) et les bulletins de transcription relatifs à un jugement déclaratif de naissance. Le fichier de 2017 comprend 769 553 observations. L'enregistrement de la naissance est effectué dans la commune de l'accouchement. Les renseignements sont demandés au déclarant et si possible, contrôlés d'après le Livret de famille. Le jugement déclaratif de naissance est une naissance vivante qui n'a pas été déclarée dans le délai légal (3 jours) ou qui a fait l'objet d'une déclaration par un officier d'état civil incompétent pour la recevoir. Cette source administrative permet de comptabiliser et d'étudier les naissances selon divers critères sociodémographiques (sexe de l'enfant, âge des parents, environnement familial, situation professionnelle des parents, tranche d'unité urbaine...).
DOI: 10.13144/lil-1286
title: État civil communal - 2017

description: Présentation des statistiques de naissances et de décès domiciliés pour toutes les communes de France (métropole et DOM) en 2017. Pour les communes de Paris, Lyon et Marseille, les données sont présentées pour la commune entière et par arrondissement municipal (attention aux doubles comptes). Les statistiques sont dressées à partir des bulletins statistiques de l'état civil établis par les maires au moment et dans la commune où ont lieu des évènements, survenus en métropole ou dans les DOM. Pour les naissances, le lieu de l'évènement est celui du domicile de la mère. Seuls les enfants nés vivants sont intégrés dans ces statistiques. Pour les décès, le lieu de l'évènement est celui du domicile du défunt. Les évènements sont décrits dans les limites communales au 1er janvier 2018. Le fichier décrit 35 385 communes et arrondissements municipaux avec 15 variables, dont 13 identifiants et zonages.
DOI: 10.13144/lil-1287
title: Table d'appartenance géographique des communes - 2018

description: La table d'appartenance géographique des communes fournit pour toutes les communes de métropole et des DOM (Martinique, Guadeloupe, Guyane, La Réunion, Mayotte) le code géographique des niveaux géographiques supérieurs auxquels elles appartiennent (35 357 communes et les 45 arrondissements municipaux de Paris, Lyon et Marseille). Pour chaque commune, les niveaux géographiques supérieurs sont : la région (REG), le département (DEP), l'arrondissement (ARR), le canton ville (CV), la zone d'emploi (ZE), l'unité urbaine (UU), la tranche d'unité urbaine (TUU) et la tranche détaillée d'unité urbaine (TDUU), le type (TYPE_COM) et le statut (STATUT) de commune, l'aire urbaine (AU), la tranche d'aire urbaine (TAU), la catégorie de la commune dans le zonage en aires urbaines (CATAEU), le bassin de vie (BV), l'établissement public à fiscalité propre (EPCI), et la nature d'établissement public à fiscalité propre (NATURE_EPCI). Tous les découpages géographiques proposés sont à jour à la date du 1er janvier 2018.
DOI: 10.13144/lil-1288
title: État civil - Fichier détail Décès - 2017

description: Le fichier annuel des décès est le résultat de l'exploitation des bulletins d'état civil envoyés par les mairies ayant enregistré des décès en France métropolitaine, dans les DOM (Guadeloupe, Martinique, Guyane, La Réunion), et depuis 2014 à Mayotte. A partir de 2015, les fichiers détail n'intègrent plus les données enregistrées à Saint-Martin, Saint-Barthélemy et Saint-Pierre-et-Miquelon, afin d'être cohérentes avec l'ensemble des données diffusées sur l'état civil. Le fichier de 2017 comprend 606 274 observations. L'enregistrement du décès est effectué dans la commune où a eu lieu le décès. Les renseignements sont demandés au déclarant et inscrits sur le bulletin de décès. Les causes de décès sont traitées par l'Inserm et ne figurent pas dans ce fichier. A partir de 2010, le fichier annuel des décès contient en plus des bulletins habituels de décès, les bulletins de transcription relatifs à un jugement déclaratif de décès (JDD). Cette source administrative permet de comptabiliser et d'étudier les décès selon divers critères sociodémographiques (sexe, âge, état matrimonial...) ainsi que la mortalité infantile.
DOI: 10.13144/lil-1289
title: Recensement de la population 2015 : fichier détail logements

description: Le fichier détail logements du recensement de la population de 2015 porte sur la localisation, les caractéristiques d'un logement ordinaire (catégorie, type de construction, confort, surface, nombre de pièces, etc…), et les caractéristiques sociodémographiques du ménage qui y réside. Les informations relatives au ménage sont fournies uniquement lorsque le logement est occupé au titre de la résidence principale. Les variables y sont disponibles avec des modalités détaillées, y compris les variables à diffusion restreinte (nationalité, pays de naissance, ancienneté d'arrivée en France). A partir de ce fichier, il est donc possible de faire des analyses exploratoires de données, de modéliser des comportements, ou simplement de tabuler sur une sous-population particulière définie selon certains critères : appartenance à une zone géographique et/ou unité statistique présentant certaines caractéristiques.
DOI: 10.13144/lil-1290
title: Recensement de la population 2015 : fichier détail individus localisés au niveau du canton-ou-ville

description: Le fichier détail "individus localisés au niveau du canton-ou-ville" du recensement de la population de 2015 décrit les individus selon leurs caractéristiques sociodémographiques, celles du ménage auquel ils appartiennent, ainsi que les principales caractéristiques de leur résidence principale. Les variables y sont disponibles avec des modalités détaillées, y compris les variables à diffusion restreinte (nationalité, pays de naissance, ancienneté d'arrivée en France). A partir de ce fichier, il est donc possible de faire des analyses exploratoires de données, de modéliser des comportements, ou simplement de tabuler sur une sous-population particulière définie selon certains critères : appartenance à une zone géographique et/ou unité statistique présentant certaines caractéristiques.
DOI: 10.15468/dl.a9v2sp
title: Occurrence Download

description: A dataset containing 4808 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pedicularis comosa L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4808 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0297715-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tk6esj
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex chinganensis Litv."
 ]
}

 The dataset includes 23 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120114-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qtb5ah
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nymphargus nephelophila (Ruiz-Carranza & Lynch, 1991)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0297759-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqsks9
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex rhynchophora Franch."
 ]
}

 The dataset includes 17 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120136-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yrq3m6
title: Occurrence Download

description: A dataset containing 1717 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyrtonyx ocellatus (Gould, 1837)"
 ]
}

 The dataset includes 1717 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0307249-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n98vky
title: Occurrence Download

description: A dataset containing 668252 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Ringing Data from the Bird Migration Research Station, University of Gdańsk"
 ]
}

 The dataset includes 668252 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120116-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7phx4y
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Physalaemus cuqui Lobo, 1993"
 ]
}

 The dataset includes 67 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0307260-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uaexbj
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex cirrhulosa Nees"
 ]
}

 The dataset includes 10 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120164-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k46tem
title: Occurrence Download

description: A dataset containing 10871 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Albizia lebbekoides (DC.) Benth., Alburnoides bipunctatus (Bloch, 1782))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 10871 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0229556-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v4sxxq
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epicriidae",
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 31 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018911-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ytdkv
title: Occurrence Download

description: A dataset containing 1914 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alburnus arborella (Bonaparte, 1841))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 1914 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0229563-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p2mfq8
title: Occurrence Download

description: A dataset containing 885 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-194.76481 69.0494,-243.0925 44.37898,-258.58215 15.36084,-79.52189 9.31111,-102.44656 21.81655,-114.21867 32.80125,-125.99081 54.77102,-140.24128 71.55229,-171.22056 73.5913,-194.76481 69.0494))",
 "HasGeospatialIssue is false",
 "Month is December",
 "TaxonKey is Megaptera novaeangliae (Borowski, 1781)",
 "Year 2021-2021"
 ]
}

 The dataset includes 885 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023008-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9mhecx
title: Occurrence Download

description: A dataset containing 3198 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alchemilla fissa Günther & Schummel)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 3198 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0229604-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ca5jgz
title: Occurrence Download

description: A dataset containing 186 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Halarachnidae",
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 186 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018927-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hbs7h7
title: Occurrence Download

description: A dataset containing 457 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Chrysocyon brachyurus (Illiger, 1815)"
 ]
}

 The dataset includes 457 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0282963-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4dybuq
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex chillanensis Phil."
 ]
}

 The dataset includes 39 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120108-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fxc6an
title: Occurrence Download

description: A dataset containing 835 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllobates terribilis Myers, Daly & Malkin, 1978"
 ]
}

 The dataset includes 835 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0307230-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hrrudc
title: Occurrence Download

description: A dataset containing 202 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eviphididae",
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 202 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018917-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzvug7
title: Occurrence Download

description: A dataset containing 3513 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Lepeophtheirus salmonis (Krøyer, 1837))"
 ]
}

 The dataset includes 3513 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023515-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9gda4
title: Occurrence Download

description: A dataset containing 90889 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crocodylia",
 "Geometry POLYGON((95 -20,150 -20,150 16,95 16,95 -20))",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 2000",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY-NC 4.0, CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 90889 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002062-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4e78sh
title: Occurrence Download

description: A dataset containing 1152929 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alburnus alburnus (Linnaeus, 1758), Alcedo atthis (Linnaeus, 1758))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 1152929 records from 1102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0229564-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vxuvuv
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xyris blanchetiana Malme"
 ]
}

 The dataset includes 60 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034992-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10947877
title: Supplementary data for: Convergent reductive evolution of cyanobacteria in symbiosis with Dinophysiales dinoflagellates

description: Supplementary data for phylogenomic analysis in "Convergent reductive evolution of cyanobacteria in symbiosis with Dinophysiales dinoflagellates" by Nakayama, T., Nomura, M., Yabuki, A., Shiba, K., Inaba, K., & Inagaki, Y. (https://doi.org/10.1101/2024.01.11.574452).

The compressed file phylogenomic_analysis_dataset.tar.gz contains the following directories and files.



concatenated_dataset.fasta : dataset used for the phylogenomic analysis, constructed by combining 143 protein alignments.

single_protein_datasets: directory containing each orthologous protein sequence from which the concatenated dataset was derived.It also contains the following subdirectories.



original_sequences: contains the multi-FASTA files of the original sequences for each orthologous protein.

multiple_alignments: contains multiple alignments for each orthologous protein.

trimmed_alignments: contains multiple alignments for each protein, with positions not suitable for analysis removed. These files are combined into single_protein_dataset.fasta.