cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17276569
title: Sustainable Aeolian Soil Stabilization Using Locally Sourced Marble Waste: Wind Tunnel Experiments on Scaled Thar Desert Dune Models

description: The attached file contains the dataset obtained from the wind tunnel experiments, which has been used to generate the figures presented in the manuscript.
DOI: 10.15468/dl.p5j7bb
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cleidiocarpon cavaleriei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 91 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053207-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yy7syy
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 {
 "or" : [
 "InstitutionKey is not null",
 "CollectionKey is not null"
 ]
 },
 "BasisOfRecord is one of (Specimen, Fossil, Material sample, Living Specimen, Material citation)"
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Acroteriobatus [GBIF Backbone Taxonomy])",
 "InstitutionKey is one of (a90ba963-9569-4b96-8d56-452aa7b83f75)"
 ]
 }
 ]
}

 The dataset includes 47 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053208-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/pc20-ftmx-8d09
title: ICE-T: OPC Surface Analysis Imagery. Version 1.0

description: This dataset consists of gif images from the National Weather Service Ocean Prediction Center (OPC) Surface Analysis plots taken during the Ice in Clouds Experiment - Tropical (ICE-T) project.
DOI: 10.15468/dl.rk4gvs
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Berberis aristata"
 ]
}

 The dataset includes 98 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053211-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qp6nv6
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pavetta leytensis"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053212-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16942045
title: MethylomeMiner: A Novel Tool for High-Resolution Analysis of Bacterial Methylation Patterns from Nanopore Sequencing

description: This dataset accompanies the manuscript MethylomeMiner: A Novel Tool for High-Resolution Analysis of Bacterial Methylation Patterns from Nanopore Sequencing. It contains sequencing data, genome assemblies, annotations, and downstream analysis results used in the study.

Basecalled FASTQ files are deposited at NCBI SRA under BioProject PRJNA675431.The following files are provided here on Zenodo:





de novo assembled genomes (FASTA)




genome annotations (GFF, GBK)




BAM files with methylation detection (4mC, 5mC and 6mA)




bedMethyl tables


Roary pangenome results (gene presence/absence table and pre-annotated GFF)



MethylomeMiner outputs (per genome and pangenome-level outputs)



For a detailed description of the dataset structure, please refer to the included README.md file.
DOI: 10.5281/zenodo.16942046
title: MethylomeMiner: A Novel Tool for High-Resolution Analysis of Bacterial Methylation Patterns from Nanopore Sequencing

description: This dataset accompanies the manuscript MethylomeMiner: A Novel Tool for High-Resolution Analysis of Bacterial Methylation Patterns from Nanopore Sequencing. It contains sequencing data, genome assemblies, annotations, and downstream analysis results used in the study.

Basecalled FASTQ files are deposited at NCBI SRA under BioProject PRJNA675431.The following files are provided here on Zenodo:





de novo assembled genomes (FASTA)




genome annotations (GFF, GBK)




BAM files with methylation detection (4mC, 5mC and 6mA)




bedMethyl tables


Roary pangenome results (gene presence/absence table and pre-annotated GFF)



MethylomeMiner outputs (per genome and pangenome-level outputs)



For a detailed description of the dataset structure, please refer to the included README.md file.
DOI: 10.15468/dl.7escrn
title: Occurrence Download

description: A dataset containing 6132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((42.12546 40.98696,42.99229 40.98696,42.99229 41.50134,42.12546 41.50134,42.12546 40.98696))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 6132 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053214-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sn8vh8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Polypodiopsida)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-180 -90,-150 -90,-150 -60,-180 -60,-180 -90))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053215-250920141307145/datasets/export for details.
DOI: 10.15468/dl.b35gt3
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Iberodes littoralis gallaecica)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 55 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053217-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7aea5v
title: Occurrence Download

description: A dataset containing 24107 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prosopis juliflora"
 ]
}

 The dataset includes 24107 records from 439 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053216-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k79d9x
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Echis coloratus Günther, 1878, Echis coloratus Arnold & Gallagher, 1977, Echis coloratus Gasperetti, 1988, Echis colorata Günther, 1878)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 216 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044970-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q3ht68
title: Occurrence Download

description: A dataset containing 422 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Muntingia calabura L."
 ]
}

 The dataset includes 422 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076496-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5523td
title: Occurrence Download

description: A dataset containing 88461 species occurrences available in GBIF matching the query:
{
 "and" : [
 "MediaType is Image",
 "TaxonKey is Alliaria petiolata (M.Bieb.) Cavara & Grande"
 ]
}

 The dataset includes 88461 records from 137 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044945-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xv4rwn
title: Occurrence Download

description: A dataset containing 2022 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Papaver setigerum DC.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2022 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076459-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5rmyjp
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-88.9069230000000061 39.8404595000000015, -88.9069230000000061 39.8415795499999987, -88.9069230000000061 39.8422067799999979, -88.9069230000000061 39.8432820299999975, -88.9069230000000061 39.8439092500000029, -88.9069230000000061 39.8449396999999976, -88.9061174299999948 39.8449396999999976, -88.9054461700000047 39.8449396999999976, -88.9045511500000032 39.8449396999999976, -88.9039246399999996 39.8449396999999976, -88.9031191299999932 39.8449396999999976, -88.9020451100000031 39.8449396999999976, -88.9012843400000037 39.8449396999999976, -88.9004788299999973 39.8449396999999976, -88.8990914999999973 39.8449396999999976, -88.8990914999999973 39.8443124699999984, -88.8990914999999973 39.8434164299999978, -88.8990914999999973 39.8427444000000008, -88.8990914999999973 39.8422515800000028, -88.8990914999999973 39.8415795499999987, -88.8990914999999973 39.8404595000000015, -88.8998970699999944 39.8404595000000015, -88.9007473300000015 39.8404595000000015, -88.9021346100000045 39.8404595000000015, -88.9031191299999932 39.8404595000000015, -88.9038351399999982 39.8404595000000015, -88.9046406599999983 39.8404595000000015, -88.9056699300000020 39.8404595000000015, -88.9069230000000061 39.8404595000000015))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 25 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087686-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9aqgbh
title: Occurrence Download

description: A dataset containing 975 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carlia rufilatus Storr, 1974)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 975 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044993-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ehe34d
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Philodendron simulans G.S.Bunting"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074361-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.66wc75
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trapania japonica (Baba, 1935)"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100247-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eddbvc
title: Occurrence Download

description: A dataset containing 1065 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Setaria incrassata (Hochst.) Hack."
 ]
}

 The dataset includes 1065 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126964-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yxj854
title: Occurrence Download

description: A dataset containing 162 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Adalaria loveni (Alder & Hancock, 1862)"
 ]
}

 The dataset includes 162 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076450-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.53gwsx
title: Occurrence Download

description: A dataset containing 165 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trapania maculata Haefelfinger, 1960"
 ]
}

 The dataset includes 165 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100249-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.snyu6h
title: Occurrence Download

description: A dataset containing 429 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pleuropogon refractus (A.Gray) Benth. ex Vasey"
 ]
}

 The dataset includes 429 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085565-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qfz46d
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontostemma filipes (C.Y.Wu ex L.H.Zhou) Rabeler & W.L.Wagner"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044924-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6fkzxn
title: Occurrence Download

description: A dataset containing 26410 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Digitalis lutea L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 26410 records from 235 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100252-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g99msw
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carlia leucotaenia (Bleeker, 1860))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044906-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yrvmgt
title: Occurrence Download

description: A dataset containing 989 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trichotropis cancellata Hinds, 1843"
 ]
}

 The dataset includes 989 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100257-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9nbmqa
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tricolia deschampsi Gofas, 1993"
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100263-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gjgnhs
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arenaria funiculata Fior & P.O.Karis"
 ]
}

 The dataset includes 41 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044964-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wq99jr
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tricolia punctura Gofas, 1993"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100275-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7yy8d7
title: Occurrence Download

description: A dataset containing 19791 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Fraxinus ornus L.)",
 "OccurrenceStatus is one of (Present)",
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than 1e+05"
 ]
}

 The dataset includes 19791 records from 200 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085566-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ugwvp
title: Occurrence Download

description: A dataset containing 2251 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Jamesbrittenia atropurpurea (Benth.) Hilliard, Macropsychanthus scaber (Rich.) L.P.Queiroz & Snak, Senna cernua (Balb.) H.S.Irwin & Barneby, Senna foetidissima (Ruiz & Pav. ex G.Don) H.S.Irwin & Barneby, Madhuca curtisii (King & Gamble) Ridl.)"
 ]
}

 The dataset includes 2251 records from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064099-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yv7kfk
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is White shark tagging off New Zealand"
 ]
}

 The dataset includes 2214 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044928-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dkyyec
title: Occurrence Download

description: A dataset containing 4536 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acteon tornatilis (Linnaeus, 1758)"
 ]
}

 The dataset includes 4536 records from 131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076441-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wghz99
title: Occurrence Download

description: A dataset containing 5776 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vicia disperma DC."
 ]
}

 The dataset includes 5776 records from 202 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030278-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b54fgq
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Passiflora campanulata Mast.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 67 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076489-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3g9dx
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Heteroliodon lava Nussbaum & Raxworthy, 2000)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044916-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4bgxxu
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cyrtodactylus annandalei Bauer, 2003)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045004-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.azy47s
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Addisonia excentrica (Tiberi, 1855)"
 ]
}

 The dataset includes 61 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076456-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.