cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7505803
title: PAsCAL WP6 Pilot 1 High-Capacity Bus Operations

description: This dataset was collected within the context of the PAsCAL research project between June 2021 and September 2021 at the E-Bus Competence Centre premises in Livange, Luxembourg. Subject of the pilot was a Wizard of Oz experiment, which consisted of a modified high-capacity bus vehicle to simulate a Level-5 automated vehicle to the passengers, although the bus was operated and driven by a human driver, which was not visible to the participants. The participants experienced several malfunctions of the bus and were offered a Human-Machine-Interface (HMI), which connected them to a traffic control centre for troubleshooting. The purpose of the pilot was to evaluate whether available HMIs are able to bridge the gap to human driver support to passengers. Some of the participants were blind or partially sighted to also observe the adequacy of the solution on vulnerable travellers. In order to analyse the answers given to the questions, it is recommended to consult also the "PAsCAL WP6 Pilots Surveys" dataset, which contains all questions and possible answers.
DOI: 10.5281/zenodo.7505804
title: PAsCAL WP6 Pilot 1 High-Capacity Bus Operations

description: This dataset was collected within the context of the PAsCAL research project between June 2021 and September 2021 at the E-Bus Competence Centre premises in Livange, Luxembourg. Subject of the pilot was a Wizard of Oz experiment, which consisted of a modified high-capacity bus vehicle to simulate a Level-5 automated vehicle to the passengers, although the bus was operated and driven by a human driver, which was not visible to the participants. The participants experienced several malfunctions of the bus and were offered a Human-Machine-Interface (HMI), which connected them to a traffic control centre for troubleshooting. The purpose of the pilot was to evaluate whether available HMIs are able to bridge the gap to human driver support to passengers. Some of the participants were blind or partially sighted to also observe the adequacy of the solution on vulnerable travellers. In order to analyse the answers given to the questions, it is recommended to consult also the "PAsCAL WP6 Pilots Surveys" dataset, which contains all questions and possible answers.
DOI: 10.6084/m9.figshare.21821160
title: Immunity of turbot Induced by inactivated vaccine of Aeromonas salmonicida from the perspective of DNA methylation

description: Combined analysis of WGBS results and RNA-seq results.The expression level of DEGs was divided into four levels: none, low, medium, and high, and their corresponding methylation level in the CG sequence environment was calculated.
DOI: 10.6084/m9.figshare.21821160.v1
title: Immunity of turbot Induced by inactivated vaccine of Aeromonas salmonicida from the perspective of DNA methylation

description: Combined analysis of WGBS results and RNA-seq results.The expression level of DEGs was divided into four levels: none, low, medium, and high, and their corresponding methylation level in the CG sequence environment was calculated.
DOI: 10.34740/kaggle/dsv/4811792
title: COVID Vaccination in World (updated daily)
DOI: 10.6084/m9.figshare.21821229
title: UNC Assay Data

description: Data from 17 subjects (with one file per subject) from the University of North Carolina (UNC) HIV Cure Center in Chapel Hill, North Carolina.
DOI: 10.5517/ccdc.csd.cc2548by
title: CCDC 2000099: Experimental Crystal Structure Determination

description: Related Article: Fan Lv, Xing Guo, Zhong-Yuan Li, Qinghua Wu, Juanjie Chen, Changjiang Yu, Lijuan Jiao, Erhong Hao|2023|Dyes Pigm.|210|111030|doi:10.1016/j.dyepig.2022.111030
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.24417/bmdc.be:dataset:2681
title: Habitat suitability map of Abra alba community in the Belgian Part of the North Sea

description: The habitat suitability map (HSM) of the Abra alba community is a map describing the likelihood of presence of the Abra alba community from 0 to 100% across the Belgian Part of the North Sea. The Abra alba community is a macrobethic species assemblage characteristics of the area. The map is the visualization of a species distribution modelling exercise which consisted in modelling the likelihood of presence of the specific macrobenthic community based on the environmental parameters available. The modelling exercise was performed using a large dataset of macrobenthos samples.
DOI: 10.25405/data.ncl.21433008.v1
title: Biochar benefits carbon off-setting in blue-green infrastructure soil: A lysimeter study

description: This deposits contains data underpinning the tables and figures in the publication: Biochar benefits carbon off-setting in blue-green infrastructure soil: A lysimeter study https://doi.org/10.1016/j.jenvman.2022.116639 <br>
DOI: 10.6084/m9.figshare.21369996.v2
title: bRMS_data.xlsx

description: visual working memory regulates the priority for access to visual awareness. <br>
DOI: 10.6084/m9.figshare.21369996.v1
title: bRMS_data.xlsx

description: visual working memory regulates the priority for access to visual awareness. <br>
DOI: 10.6084/m9.figshare.21369996.v3
title: bRMS_raw data.xlsx

description: visual working memory regulates the priority for access to visual awareness. <br>
DOI: 10.6084/m9.figshare.21369996
title: bRMS_raw data.xlsx

description: visual working memory regulates the priority for access to visual awareness. <br>
DOI: 10.17909/n36k-dw61
title: IUE data HD 1909
DOI: 10.5281/zenodo.7506345
title: Contrasting phylogeographic patterns of mitochondrial and genome-wide variation in the groundwater amphipod (Crangonyx islandicus) that survived the Ice age in Iceland

description: In this zip "DataAvailability.zip" all the data and parameter files, as well as R scripts and bash codes used to perform the analyses of the mitochondrial and the RADseq data are provided. A ReadMe file is available at the root describing the content of the different folders and files. Below is the abstract of the associated manuscript: Analysis of phylogeographic patterns have often been based on mitochondrial DNA variation, but recent analyses dealing with nuclear DNA have in some instances revealed mito-nuclear discordances and complex evolutionary histories. These enigmatic scenarios which may involve stochastic lineage sorting, ancestral hybridization, past dispersal, and secondary contacts are increasingly scrutinized with a new generation of genomic tools such as RADseq, which pose also additional analytical challenges. Here, we revisited the previously inconclusive phylogeographic history, showing mito-nuclear discordance, of an endemic groundwater amphipod from Iceland, <em>Crangonyx islandicus,</em> which is the only metazoan known to have survived the Pleistocene beneath the glaciers. Previous studies based on three DNA markers documented a mitochondrial scenario with the main divergence occurring between populations in northern Iceland and an ITS scenario with the main divergence between the south and north. We used double digest restriction-site-associated DNA sequencing (ddRADseq) to clarify this mito-nuclear discordance by applying several statistical methods while estimating the sensitivity to different analytical approaches (data-type, differentiation indices and base call uncertainty). A majority of nuclear markers and methods support the ITS divergence. Nevertheless, a more complex scenario emerges, possibly involving introgression led by male-biased dispersal among northern locations or mitochondrial capture which may have been further strengthened by natural selection.
DOI: 10.5281/zenodo.7506344
title: Contrasting phylogeographic patterns of mitochondrial and genome-wide variation in the groundwater amphipod (Crangonyx islandicus) that survived the Ice age in Iceland

description: In this zip "DataAvailability.zip" all the data and parameter files, as well as R scripts and bash codes used to perform the analyses of the mitochondrial and the RADseq data are provided. A ReadMe file is available at the root describing the content of the different folders and files. Below is the abstract of the associated manuscript: Analysis of phylogeographic patterns have often been based on mitochondrial DNA variation, but recent analyses dealing with nuclear DNA have in some instances revealed mito-nuclear discordances and complex evolutionary histories. These enigmatic scenarios which may involve stochastic lineage sorting, ancestral hybridization, past dispersal, and secondary contacts are increasingly scrutinized with a new generation of genomic tools such as RADseq, which pose also additional analytical challenges. Here, we revisited the previously inconclusive phylogeographic history, showing mito-nuclear discordance, of an endemic groundwater amphipod from Iceland, <em>Crangonyx islandicus,</em> which is the only metazoan known to have survived the Pleistocene beneath the glaciers. Previous studies based on three DNA markers documented a mitochondrial scenario with the main divergence occurring between populations in northern Iceland and an ITS scenario with the main divergence between the south and north. We used double digest restriction-site-associated DNA sequencing (ddRADseq) to clarify this mito-nuclear discordance by applying several statistical methods while estimating the sensitivity to different analytical approaches (data-type, differentiation indices and base call uncertainty). A majority of nuclear markers and methods support the ITS divergence. Nevertheless, a more complex scenario emerges, possibly involving introgression led by male-biased dispersal among northern locations or mitochondrial capture which may have been further strengthened by natural selection.
DOI: 10.6084/m9.figshare.21312219
title: Data: Microplastic distribution among estuarine sedimentary habitats utilized by intertidal crabs (Vermeiren et al. 2022)

description: Datasets used in the publication: Vermeiren et al. (2023) Microplastic distribution among estuarine sedimentary habitats utilized by intertidal crabs, Science of the Total Environment. <br> <br> Please see the 'Data Overview.txt' file for details on all datasets
DOI: 10.5281/zenodo.7495771
title: A randomized controlled trial of hand/foot-cooling by hilotherapy to prevent oxaliplatin-related peripheral neuropathy in patients with malignancies of the digestive system

description: This dataset reports data from a randomized controlled trial of hand/foot-cooling by hilotherapy to prevent oxaliplatin-related peripheral neuropathy in patients with malignancies of the digestive system.
DOI: 10.5281/zenodo.7495770
title: A randomized controlled trial of hand/foot-cooling by hilotherapy to prevent oxaliplatin-related peripheral neuropathy in patients with malignancies of the digestive system

description: This dataset reports data from a randomized controlled trial of hand/foot-cooling by hilotherapy to prevent oxaliplatin-related peripheral neuropathy in patients with malignancies of the digestive system.
DOI: 10.6084/m9.figshare.21821328
title: Inversions maintain differences between migratory phenotypes of a songbird - Source and annotation data

description: Data associated with the study <em><strong>Inversions maintain differences between migratory phenotypes of a songbird</strong></em>
DOI: 10.6084/m9.figshare.21821328.v1
title: Inversions maintain differences between migratory phenotypes of a songbird - Source and annotation data

description: Data associated with the study <em><strong>Inversions maintain differences between migratory phenotypes of a songbird</strong></em>
DOI: 10.6084/m9.figshare.21221912
title: DataSet

description: Full dataset used in the study "Faster triceps surae muscle cyclic contractions alter muscle activity and whole-body metabolic rate" including the individual data.
DOI: 10.6084/m9.figshare.21552416.v2
title: Valid Model-Free Spatial Prediction

description: Predicting the response at an unobserved location is a fundamental problem in spatial statistics. Given the difficulty in modeling spatial dependence, especially in nonstationary cases, model-based prediction intervals are at risk of misspecification bias that can negatively affect their validity. Here we present a new approach for model-free nonparametric spatial prediction based on the <i>conformal prediction</i> machinery. Our key observation is that spatial data can be treated as exactly or approximately exchangeable in a wide range of settings. In particular, under an infill asymptotic regime, we prove that the response values are, in a certain sense, locally approximately exchangeable for a broad class of spatial processes, and we develop a local spatial conformal prediction algorithm that yields valid prediction intervals without strong model assumptions like stationarity. Numerical examples with both real and simulated data confirm that the proposed conformal prediction intervals are valid and generally more efficient than existing model-based procedures for large datasets across a range of nonstationary and non-Gaussian settings.
DOI: 10.6084/m9.figshare.21552416
title: Valid model-free spatial prediction

description: Predicting the response at an unobserved location is a fundamental problem in spatial statistics. Given the difficulty in modeling spatial dependence, especially in non-stationary cases, model-based prediction intervals are at risk of misspecification bias that can negatively affect their validity. Here we present a new approach for model-free nonparametric spatial prediction based on the conformal prediction machinery. Our key observation is that spatial data can be treated as exactly or approximately exchangeable in a wide range of settings. In particular, under an infill asymptotic regime, we prove that the response values are, in a certain sense, locally approximately exchangeable for a broad class of spatial processes, and we develop a local spatial conformal prediction algorithm that yields valid prediction intervals without strong model assumptions like stationarity. Numerical examples with both real and simulated data confirm that the proposed conformal prediction intervals are valid and generally more efficient than existing model-based procedures for large datasets across a range of non-stationary and non-Gaussian settings.
DOI: 10.6084/m9.figshare.21552416.v1
title: Valid model-free spatial prediction

description: Predicting the response at an unobserved location is a fundamental problem in spatial statistics. Given the difficulty in modeling spatial dependence, especially in non-stationary cases, model-based prediction intervals are at risk of misspecification bias that can negatively affect their validity. Here we present a new approach for model-free nonparametric spatial prediction based on the conformal prediction machinery. Our key observation is that spatial data can be treated as exactly or approximately exchangeable in a wide range of settings. In particular, under an infill asymptotic regime, we prove that the response values are, in a certain sense, locally approximately exchangeable for a broad class of spatial processes, and we develop a local spatial conformal prediction algorithm that yields valid prediction intervals without strong model assumptions like stationarity. Numerical examples with both real and simulated data confirm that the proposed conformal prediction intervals are valid and generally more efficient than existing model-based procedures for large datasets across a range of non-stationary and non-Gaussian settings.
DOI: 10.26106/zdwq-x775
title: Pilotage data on the unified test of metaphor, humor, and irony comprehension (MCFLCT) - concept
DOI: 10.5281/zenodo.7506049
title: Human genomes for GGCAT benchmarks - part 1

description: The first 50 genomes of the 100 Human genomes used for GGCAT benchmarks
description: {"references": ["Cracco, A., Tomescu, A.I.: Extremely-fast construction and querying of compacted and colored de Bruijn graphs with GGCAT. bioRxiv (2022). https://doi.org/10. 1101/2022.10.24.513174", "Sebastian Schmidt, Shahbaz Khan, Jarno Alanko, and Alexandru I. Tomescu. Matchtigs: minimum plain text representation of kmer sets. bioRxiv, 2021.12.15.472871, 2022.", "The 1000 Genomes Project Consortium et al. A global reference for human genetic variation. Nature, 526(7571):68\u201374, September 2015."]}
DOI: 10.5281/zenodo.7506048
title: Human genomes for GGCAT benchmarks - part 1

description: The first 50 genomes of the 100 Human genomes used for GGCAT benchmarks
description: {"references": ["Cracco, A., Tomescu, A.I.: Extremely-fast construction and querying of compacted and colored de Bruijn graphs with GGCAT. bioRxiv (2022). https://doi.org/10. 1101/2022.10.24.513174", "Sebastian Schmidt, Shahbaz Khan, Jarno Alanko, and Alexandru I. Tomescu. Matchtigs: minimum plain text representation of kmer sets. bioRxiv, 2021.12.15.472871, 2022.", "The 1000 Genomes Project Consortium et al. A global reference for human genetic variation. Nature, 526(7571):68\u201374, September 2015."]}
DOI: 10.5281/zenodo.7498778
title: Dataset with Risk estimates of major currency pairs on the Forex market

description: This dataset includes Value at Risk (VaR) and Expected Shortfall (ES) estimations of the major currency pairs on the Forex market. Notably, it provides daily VaR and ES estimates for the AUDUSD, EURCAD, EURCHF, EURUSD, GBPUSD, and USDJPY FX assets for January 2021 to September 2022. The reported risk estimates were calculated by various parametric and non-parametric models, including Variance-Covariance (VS), Historical Simulation (HS), Monte Carlo (MC), and Garch(1,1) at both 95% and 99% confidence levels. To enable model evaluation, the last column of each CSV file, named pnl, provides the actual daily returns of the FX asset. The data and code used to create this dataset are available at Zenodo and INFINITECH Marketplace, respectively.
description: {"references": ["Fatouros, G., Makridis, G., Kotios, D. et al. DeepVaR: a framework for portfolio risk assessment leveraging probabilistic deep neural networks. Digit Finance (2022). https://doi.org/10.1007/s42521-022-00050-0"]}
DOI: 10.5281/zenodo.7498779
title: Dataset with Risk estimates of major currency pairs on the Forex market

description: This dataset includes Value at Risk (VaR) and Expected Shortfall (ES) estimations of the major currency pairs on the Forex market. Notably, it provides daily VaR and ES estimates for the AUDUSD, EURCAD, EURCHF, EURUSD, GBPUSD, and USDJPY FX assets for January 2021 to September 2022. The reported risk estimates were calculated by various parametric and non-parametric models, including Variance-Covariance (VS), Historical Simulation (HS), Monte Carlo (MC), and Garch(1,1) at both 95% and 99% confidence levels. To enable model evaluation, the last column of each CSV file, named pnl, provides the actual daily returns of the FX asset. The data and code used to create this dataset are available at Zenodo and INFINITECH Marketplace, respectively.
description: {"references": ["Fatouros, G., Makridis, G., Kotios, D. et al. DeepVaR: a framework for portfolio risk assessment leveraging probabilistic deep neural networks. Digit Finance (2022). https://doi.org/10.1007/s42521-022-00050-0"]}
DOI: 10.6084/m9.figshare.18397244.v1
title: Wheat functional and nutritional quality phenotypes dataset

description: Phenotypes dataset associated with the publication (Trade-offs in the genetic control of functional and nutritional quality traits in UK winter wheat) DOI: https://doi.org/10.1038/s41437-022-00503-7
DOI: 10.6084/m9.figshare.18397244
title: Wheat functional and nutritional quality phenotypes dataset

description: Phenotypes dataset associated with the publication (Trade-offs in the genetic control of functional and nutritional quality traits in UK winter wheat) DOI: https://doi.org/10.1038/s41437-022-00503-7
DOI: 10.5281/zenodo.2541226
title: Sri Ksetra (HMA) Digitised Paper Archive (Version 1)

description: This is the current version of a digitised excavation archive, deriving from archaeological investigations at Sri Ksetra (HMA) in Burma (Myanmar) carried out 2014-16. It comprises: excavation records, artefact illustrations, section drawings, plans, maps, artefact data, sample data, field notes and accompanying indexes.
DOI: 10.5281/zenodo.2541225
title: Sri Ksetra (HMA) Digitised Paper Archive (Version 1)

description: This is the current version of a digitised excavation archive, deriving from archaeological investigations at Sri Ksetra (HMA) in Burma (Myanmar) carried out 2014-16. It comprises: excavation records, artefact illustrations, section drawings, plans, maps, artefact data, sample data, field notes and accompanying indexes.
DOI: 10.6084/m9.figshare.21821457
title: NIAB global and UK subset wheat pedigree files. 05/01/23 update

description: Input files for use with Helium crop pedigree visualisation software (https://github.com/cardinalb/helium-docs/wiki/Download-Helium). This dataset is an updated and edited version of the original pedigree published in PLOS Biology (https://doi.org/10.1371/journal.pbio.3000071). <br>
DOI: 10.6084/m9.figshare.21821457.v1
title: NIAB global and UK subset wheat pedigree files. 05/01/23 update

description: Input files for use with Helium crop pedigree visualisation software (https://github.com/cardinalb/helium-docs/wiki/Download-Helium). This dataset is an updated and edited version of the original pedigree published in PLOS Biology (https://doi.org/10.1371/journal.pbio.3000071). <br>
DOI: 10.5281/zenodo.7506220
title: Parallel text typology dataset

description: This repository contains data accompanying the paper <em>Neural models can sometimes discover typological generalizations</em>, currently being submitted for publication. It contains the following information for 1295 different languages: language vector representations from a range of neural models automatically derived lists of affixes automatically derived lists of inflectional paradigms typological features derived from annotation projection, and statistics on dependency relations typological features derived from classifiers trained on language vectors and typological databases automatically derived word lists data needed for automatic evaluation of language representations (code in separate repository) Note that the multilingual word embeddings described in the paper are very large, and therefore distributed in a separate public repository.
description: The computations were enabled by resources provided by the Swedish National Infrastructure for Computing (SNIC) at C3SE partially funded by the Swedish Research Council through grant agreement no. 2018-05973. This work was funded in part by the Swedish Research Council through grant agreement no. 2019-04129.