cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13153525
title: Data from: Birds influence vegetation coverage and structure on sandy biogeomorphic islands in the Dutch Wadden Sea.

description: Small uninhabited islands form important roosting and breeding habitats for many coastal birds.  Here, we assess the role of external nutrient input by coastal birds on the vegetation structure and coverage on sandy biogeomorphic islands in the Dutch Wadden Sea, where island-forming processes depend on vegetation-sedimentation feedbacks.  We Used a combination of bird observations and plant stable isotope (δ15N) analyses, to demonstrate that (i) breeding birds transport large quantities of nutrients via their faecal outputs to these islands annually and that (ii) this external nitrogen source influences vegetation development on these sandy, nutrient-limited, islands. We further discuss how this avian nutrient pump could impact island development and habitat suitability for coastal birds and discuss future directions for research. For the conservation of both threatened coastal birds and sandy back-barrier islands and the design of appropriate management strategies, we argue that three-way interactions between birds, vegetation and sandy island morphodynamics need to be further elucidated. 

 

Methods

Data stored in this repository are bird counts from all three islands [Breeding_total.csv] and the relation between total faecal excretion rates (estimated using bird counts) and average vegetation coverage (estimated using satellite imagery) [Vegetation_bird.csv]. Additionally, we gathered data in the field including vegetation charactersitics [field.data.xls], isotopic data of the vegetation [new_isotopes.csv] and soil charactersitics [Soil_prop.csv]. Detailed description of these methods and the results can found in the accompanying publication (Reijers et al. STOTEN).
DOI: 10.15468/dl.yzdg27
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.686779 -35.910858, 147.686779 -35.91535, 147.69127 -35.91535, 147.69127 -35.910858, 147.686779 -35.910858))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048105-240626123714530/datasets/export for details.
DOI: 10.15468/dl.3c5t6v
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Helarctos malayanus (Raffles, 1822)",
 "Year 1970-2024"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048106-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.82jv67
title: Occurrence Download

description: A dataset containing 409 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera uncia (Schreber, 1775)"
 ]
}

 The dataset includes 409 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048107-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3wnjj9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((147.462199 -35.910858, 147.462199 -35.917595, 147.464445 -35.917595, 147.464445 -35.910858, 147.462199 -35.910858)), ((147.464445 -35.917595, 147.464445 -35.919841, 147.468936 -35.919841, 147.468936 -35.917595, 147.464445 -35.917595)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048108-240626123714530/datasets/export for details.
DOI: 10.21227/0nt4-f976
title: RiceChain-Plus result data

description: The RiceChain-Plus framework introduces an advanced blockchain-based solution tailored for the rice supply chain, addressing key challenges of security, privacy, and efficiency. This study evaluates RiceChain-Plus using comprehensive performance metrics, including transaction and execution costs, gas consumption, energy consumption, execution time, and transaction throughput.Our analysis reveals that RiceChain-Plus achieves a notable reduction in transaction costs, with an average cost efficiency of approximately 9,781 units across various interactions. The execution cost remains low, averaging 43,965 units, emphasizing the framework's computational efficiency. Gas consumption metrics further substantiate these findings, indicating a significant optimization over traditional blockchain systems.Energy consumption metrics reveal a remarkably low usage, averaging just 0.000093 Joules per interaction, underscoring RiceChain-Plus's commitment to energy efficiency. The system demonstrates rapid execution times, with an average processing time of 44 milliseconds, and transaction times averaging 14 seconds, resulting in a transaction throughput of 0.071 transactions per second.These results highlight the potential of RiceChain-Plus to transform rice supply chains by enhancing operational efficiency and reducing costs. The framework's integration of elliptic curve cryptography and IoT sensors ensures robust security and privacy, making it a viable solution for real-world agricultural applications.
DOI: 10.5281/zenodo.8351669
title: Metabolic profiling and antibacterial activity of tree wood extracts obtained under variable extraction conditions

description: Scripts and dataset for Vinchira-Villarraga et al., 2024 "Metabolic profiling and antibacterial activity of tree wood extracts obtained under variable extraction conditions". The files label as A1, C6, H2/HCN2 and O1 correspond to the dataset obtained for Ash, Cherry, Horse-chestnut and Oak respectively. 

_batch.xml files contains the script for the pre-processing of .mzML mass spectrometry data created on MzMine 3.2.8. The file can be uploaded to newer versions of MzMine, but due to the addition of new modules, some parameters name have changed.

_SIRIUS.mfg files contains the mass spectrometry data of each dataset for analysis in SIRIUS. The files were used for chemical formula prediction, classification and compound annotation using SIRIUS 5.0

_quant.csv correspond to the output matrix as it was obtained from MzMine without noise, adducts and highly variable features filtering.

_abundance.csv correspond to the output matrix after noise, adducts and highly variable features filtering.
DOI: 10.5281/zenodo.8351670
title: Metabolic profiling and antibacterial activity of tree wood extracts obtained under variable extraction conditions

description: Scripts and dataset for Vinchira-Villarraga et al., 2024 "Metabolic profiling and antibacterial activity of tree wood extracts obtained under variable extraction conditions". The files label as A1, C6, H2/HCN2 and O1 correspond to the dataset obtained for Ash, Cherry, Horse-chestnut and Oak respectively. 

_batch.xml files contains the script for the pre-processing of .mzML mass spectrometry data created on MzMine 3.2.8. The file can be uploaded to newer versions of MzMine, but due to the addition of new modules, some parameters name have changed.

_SIRIUS.mfg files contains the mass spectrometry data of each dataset for analysis in SIRIUS. The files were used for chemical formula prediction, classification and compound annotation using SIRIUS 5.0

_quant.csv correspond to the output matrix as it was obtained from MzMine without noise, adducts and highly variable features filtering.

_abundance.csv correspond to the output matrix after noise, adducts and highly variable features filtering.
DOI: 10.15468/dl.s9c7uu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((147.410546 -35.91535, 147.410546 -35.917595, 147.415037 -35.917595, 147.415037 -35.91535, 147.410546 -35.91535)), ((147.415037 -35.917595, 147.415037 -35.919841, 147.417283 -35.919841, 147.417283 -35.917595, 147.415037 -35.917595)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048109-240626123714530/datasets/export for details.
DOI: 10.15468/dl.hsuq5c
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nigeria",
 "OccurrenceStatus is Present",
 "TaxonKey is Circaetus beaudouini J.Verreaux & Des Murs, 1862"
 ]
}

 The dataset includes 65 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048110-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.22585969
title: code

description: GEO and Lunar magnetic dataset and codes
DOI: 10.6084/m9.figshare.22585969.v2
title: code

description: GEO and Lunar magnetic dataset and codes
DOI: 10.6084/m9.figshare.22585969.v1
title: code

description: Code
DOI: 10.15468/dl.cwcx23
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.189218 -35.91535, 149.189218 -35.917595, 149.19371 -35.917595, 149.19371 -35.91535, 149.189218 -35.91535)), ((149.19371 -35.917595, 149.19371 -35.919841, 149.195956 -35.919841, 149.195956 -35.917595, 149.19371 -35.917595)))"
 ]
}

 The dataset includes 72 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048111-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u88dna
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.133073 -35.917595, 149.133073 -35.919841, 149.135319 -35.919841, 149.135319 -35.917595, 149.133073 -35.917595))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048112-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d55kpq
title: Occurrence Download

description: A dataset containing 351142 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombus terrestris (Linnaeus, 1758)"
 ]
}

 The dataset includes 351142 records from 1177 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048090-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57axxc
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Asclepias prostrata W.H.Blackw."
 ]
}

 The dataset's 1 records were derived from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231152-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d1sgjp
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Afrixalus weidholzi (Mertens, 1938)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 12 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006299-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5xtycr
title: Occurrence Download

description: A dataset containing 81633 species occurrences available in GBIF matching the query:
{
 "and" : [
 "InstitutionKey is 5798b9a6-8437-4726-85fb-339c577755c8",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 81633 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002298-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dzvapn
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prosthechea allemanii (Barb.Rodr.) W.E.Higgins"
 ]
}

 The dataset includes 30 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012466-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w4bzqr
title: Occurrence Download

description: A dataset containing 222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crotalus basiliscus (Cope, 1864)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 222 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006300-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wuu7sa
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is Taxon occurrence data for the FungalRoot database",
 "GadmGid is CHN.30_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 1980-2021"
 ]
}

 The dataset includes 451 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260041-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z34x5f
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arctium pallidivirens (Kult.) S.López, Romasch., Susanna & N.Garcia"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015237-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngq387
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uromys rex (Thomas, 1888)"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015283-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u8levj
title: Occurrence Download

description: A dataset containing 33518 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Year 1990-2017",
 {
 "or" : [
 "DatasetKey is Corredor neotropical de migración de aves en Colombia Temporada I-II/2016",
 "DatasetKey is Xeno-canto - Bird sounds from around the world"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Aves",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 33518 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012468-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6lzxks
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meriones tamariscinus (Pallas, 1773)"
 ]
}

 The dataset includes 128 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012482-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7kkbnm
title: Occurrence Download

description: A dataset containing 26398 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cnemidophorus lemniscatus (Linnaeus, 1758)"
 ]
}

 The dataset includes 26398 records from 202 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015370-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.etmw4t
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 {
 "or" : [
 "DatasetKey is Tropicos MO Specimen Data",
 "DatasetKey is Geneva Herbarium – General Collection (G)",
 "DatasetKey is SPF - Herbário da Universidade de São Paulo",
 "DatasetKey is Field Museum of Natural History (Botany) Seed Plant Collection",
 "DatasetKey is The New York Botanical Garden Herbarium (NY)",
 "DatasetKey is Instituto de Botánica Darwinion",
 "DatasetKey is iNaturalist Research-grade Observations",
 "DatasetKey is Natural History Museum (London) Collection Specimens",
 "DatasetKey is CGMS - Herbário da Fundação Universidade Federal de Mato Grosso do Sul",
 "DatasetKey is RB - Rio de Janeiro Botanical Garden Herbarium Collection"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate reprojected"
 ]
 },
 "TaxonKey is Handroanthus heptaphyllus (Vell.) Mattos"
 ]
}

 The dataset includes 279 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0263146-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.adp8n3
title: Occurrence Download

description: A dataset containing 432 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prosthechea aemula (Lindl.) W.E.Higgins"
 ]
}

 The dataset includes 432 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012470-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z9xja6
title: Occurrence Download

description: A dataset containing 17940 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Serranus tortugarum Longley, 1935"
 ]
}

 The dataset includes 17940 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059674-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2r1eon
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meriones chengi Wang, 1964"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012484-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hewndp
title: Occurrence Download

description: A dataset containing 11342901 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "DatasetKey is one of (Ringing and recovery database of birds (TIPU), Artportalen (Swedish Species Observation System), DOF/BirdLife Denmark - Observations from DOFbasen, Anillamiento SEO_Bird ringing, Waarnemingen.be - Bird occurrences in Flanders and the Brussels Capital Region, Belgium, Line transect censuses of breeding birds, Bird Ringing Centre in Sweden (NRM), Norwegian Species Observation Service, ZOBODAT (Zoological Botanical Database))",
 "Month is one of (April, May, June, July)",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 1975-2000"
 ]
}

 The dataset includes 11342901 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015138-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fvpd43
title: Occurrence Download

description: A dataset listing the 456 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-82.67873 36.46929,-82.61011 36.49332,-82.58689 36.52662,-82.67808 36.50027,-82.67873 36.46929))",
 "OccurrenceStatus is Present",
 "Year 1000-2021"
 ]
}

 The dataset's 456 records were derived from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0276701-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85ha6b
title: Occurrence Download

description: A dataset containing 2610 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Valeriana celtica L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2610 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077059-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n3ayyi
title: Occurrence Download

description: A dataset containing 963 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meriones meridianus (Pallas, 1773)"
 ]
}

 The dataset includes 963 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012483-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.su3d4h
title: Occurrence Download

description: A dataset containing 14845 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Leucaena leucocephala (Lam.) de Wit"
 ]
}

 The dataset includes 14845 records from 410 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033572-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ihxte
title: Occurrence Download

description: A dataset containing 413423 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Anthocharis Boisduval, Rambur, Duméril & Graslin, 1833",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 413423 records from 542 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012490-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czsyha
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Faurea racemosa Farmar"
 ]
}

 The dataset includes 40 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002307-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.