cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/v3gwhkyjsg.3
title: Brain lesion MRI and co-related MRS Spectroscopy Dataset

description: This dataset is significant as it integrates conventional imaging (MRI) with metabolic imaging (MRS) and expert diagnostic information. To the best of our knowledge, it is the first publicly available dataset to include both MRI and MRS images paired with expert diagnoses, providing exceptional reuse potential for medical imaging and diagnostic research.
DOI: 10.17632/gfvmk3ty67.1
title: Renewable Energy Installation Capacity Taiwan

description: Renewable Energy Installation Capacity Taiwan is the dataset for RE capacity across Taiwan Cities and Districts
DOI: 10.17632/7xb9dhvbcn.1
title: Prediabetes and Health

description: This dataset is a subset derived from the Korea National Health and Nutrition Examination Survey (KNHANES). It focuses on health metrics, dietary habits, employment status, and their association with prediabetes. The data provides valuable insights into the relationship between socioeconomic factors, physical activity, nutrition, and prediabetes risk in participants aged 19 and older. The dataset includes clinically measured indicators such as height, weight, and diabetes status, along with self-reported lifestyle behaviors.
DOI: 10.17632/dfk6pk4ss9.1
title: Zn isotopic fractionation controlled by volatiles in magmatic-hydrothermal systems

description: Data for "Zn isotopic fractionation controlled by volatiles in magmatic-hydrothermal systems"
DOI: 10.17632/ddxv7j4t7w.1
title: Date of Zhengzhou i-tree

description: These data are the Zhengzhou GCS data estimated by i-Tree Eco based on field research. A field survey was conducted in the selected sample plot from June to July 2021. A 20 m×20 m plot was set up in each sample plot to perform the tally of woody plants in the plot. The tree and shrub species name, DBH, overall height, crown width in the east-west and north-south directions, crown height, growth status, crown missing rate, light transmittance, site conditions, and other indicators were recorded. These data were used to estimate the urban forest carbon sequestration in the study area. This study only addresses the annual gross carbon sequestration (GCS) in the study area, which refers to the amount of carbon in the atmosphere that trees reduce by sequestering new carbon increased each year. This study, based on i-Tree Eco, uses the field survey data to obtain the GCS of each sample plot. Before the estimation, the i-Tree Eco basic database was updated, including tree species data, location information, meteorological precipitation data, and air quality data.
DOI: 10.17632/k4gxfhzdwz.1
title: Dataset for High-δ18O signature of Early Cretaceous lithospheric mantle beneath the North China Craton: Role of plate subduction

description: This dataset includes Supplementary Table S1-S2 for the manuscript entitled "High-δ18O signature of Early Cretaceous lithospheric mantle beneath the North China Craton: Role of plate subduction.
DOI: 10.17632/5cj4d9myrr.1
title: Data for "The effect of natural disasters on pregnancy"

description: Data for "The effect of natural disasters on pregnancy"
DOI: 10.17632/nzv7bvb2bg
title: The role of Fe2+ toxicity in inhibiting methanogenesis during microbial iron reduction by methanogens: An overlooked factor

description: Experimental data (wet chemistry, isotope values, and XRD patterns)
DOI: 10.17632/nzv7bvb2bg.1
title: The role of Fe2+ toxicity in inhibiting methanogenesis during microbial iron reduction by methanogens: An overlooked factor

description: Experimental data (wet chemistry, isotope values, and XRD patterns)
DOI: 10.15468/dl.3497s8
title: Occurrence Download

description: A dataset containing 1472 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arctium lappa L."
 ]
}

 The dataset includes 1472 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062613-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-4514
title: Models and Prepared Datasets for Convolutional Long Short-Term Memory (ConvLSTM) Networks

description: The dataset contains trained ConvLSTM models for heat plume extension and the prepared dataset for training and testing. 
&lt;br/&gt;&lt;br/&gt;
In &lt;a href="https://github.com/JohannaHn/1HP_NN/tree/conv_lstm"&gt;this repo&lt;/a&gt; the code for model training and dataset preparation is published.
The last relevant git commit is 0a148e6131b98260.
&lt;br/&gt;&lt;br/&gt;
The prepared dataset for training is called ep_medium_1000dp_only_vary_dist inputs_ks. 
It consists of 1000 simulation runs from &lt;a href="https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3652"&gt;darus-3652&lt;/a&gt; that are prepared for the ConvLSTM network.
Each data point measures 320 m x 6400 m with 64 x 1280 cells. All parameters are constant except for the permeability, which varies across the domain and from data point to data point.
DOI: 10.17632/7bw2hngcvz.1
title: ZD001

description: A fabric defect dataset was independently collected and constructed, with all original images sourced from the fabric inspection workshops of textile enterprises. A flaw imaging control system, based on computer vision, was developed in conjunction with industrial field equipment. The system integrates key technologies such as multi-light source fusion, high-precision visual sensing modules, edge computing platforms, and visual interaction. It is capable of multi-angle, high-quality, and high-resolution defect image acquisition and digital storage. For clarity, the dataset created is named ZD001_FD, which was used for training the IFD-GAN algorithm and validating its industrial application. The ZD001_FD dataset includes eight categories of cross-scale fabric defects: warp-direction defects, such as broken end, misdraw, and reediness; weft-direction defects, including thin place and thick place; and localized defects, such as hole, cotton ball, and kinky filling. 
The conventional approach to dividing test sets has limitations, as it often involves simplistic scenarios that fail to capture the complexity and diversity of real-world industrial applications, which are influenced by numerous interfering factors . To address these shortcomings, test sets were collected and created under various industrial scenarios to replicate edge-testing conditions, thereby assessing the model's adaptability and generalization capabilities.
Due to the flexible and high-fidelity cross-scale defect generation capability of IFD-GAN, the expansion and inter-class balancing of the ZD001_FD dataset were successfully achieved, resulting in enhanced diversity. The augmented dataset is named ZD001_FD_IG.
DOI: 10.17632/vppj6wtm6w.1
title: Conservative Transport Using a Compact Third-order Scheme on the Yin-Yang Grid

description: The data for this study is produced based on idealized numerical tests.
DOI: 10.17632/vppj6wtm6w.2
title: Conservative Transport Using a Compact Third-order Scheme on the Yin-Yang Grid

description: The data for this study is produced based on idealized numerical tests.
DOI: 10.17632/8krrcngmzs.1
title: An uncharacterized microprotein MicN mediates the metabolic reprogramming of Salmonella within macrophages through regulating the RpoS-RNA polymerase interaction

description: Supplementary Material of the article titled an uncharacterized microprotein MicN mediates the metabolic reprogramming of Salmonella within macrophages through regulating the RpoS-RNA polymerase interaction
DOI: 10.17632/ryzvs2zw9v.1
title: Network characterization data assessed in the chicken aortic ring assay using human adipose-derived stem cell secretomes

description: We present data assessed with the chicken aortic ring assay in the following six Excel files. First, we provide a data set covering the vessel area, maximum outgrowth radius and number of endpoints per aortic ring for the following matrices: egg white, bovine collagen, jellagel and matrigel (DiB_Figure_1_manuscript vessel network complexity). Second, secretome harvested from human adipose-derived stem cells (3 donors) cultivated as single cells, 250 cells/spheroid or 8000 cells/spheroid were applied in the chicken aortic ring assay. We provide data on the spheroid size, the protein concentration of the three secretomes, the weight of the embryos used for these experiments, the circumference of the aortic rings, the migration extent at days 1,4 and 7, the percentage of initial vessels and the number of loops per aortic ring (DiB_Figure_2_manuscript vessel network complexity). Next, the network was characterized at days 1,4 and 7. Here, we provide data on maximum outgrowth radius, maximum initial vessel length, speed mean vessel length and speed maximum vessel length, respectively (DiB_Figure_3_manuscript vessel network complexity). After that, sprouting parameters are presented. Raw data on vessel density, number of branches, mean branch length, relative frequency of branch length, number of junctions and number of junctions per initial vessels are provided (DiB_Figure_4_manuscript vessel network complexity). Finally, the raw data for these parameters for each donor are presented (DiB_Figure_S2_manuscript vessel network complexity); and the calculated angiogenic activity index (AAI) for each parameter is provided (DiB_Table_S1_manuscript vessel network complexity).
DOI: 10.17632/gdxnvsr555.1
title: Student Dataset Updated

description: The student data sheet contains 9000 records of students and twelve attributes.
The course profile sheet contains 36 records and five attributes
The course list sheet contains 37 records and three attributes
The dataset is freely available for research purposes and for building and training AI and ML models. 
This dataset will only be used for the purpose of academic research.
DOI: 10.17632/nm6pncz5xw.1
title: Dark BrC model code in GEOS-Chem

description: Dark BrC model code based on GEOS-Chem v14.2.3 in paper titled: "Global warming effect driven by overlooked dark brown carbon from biomass burning" by Wang et al.
DOI: 10.17632/j54w6n6prf.1
title: Cognitive Uncertainty

description: This dataset comes from a survey of office workers employed in an acquired or merged company in Poland in the last 10 years before the data collection. The data was collected by a professional company using the computer-assisted web interviewing method. The main part of the dataset consists of the answers for 36 statements. Respondents were asked to indicate their feelings after the merger/acquisition. The statements were meant to measure 6 latent variables: CU - Cognitive Uncertainty, JS - Job Satisfaction, CE - Communication Effectiveness, VL - Visionary Leadership, ER - Employee Resilience, and OI - Organisational Identification. The answers for each statement were indicated on the 5-point Likert-type scale (from -2, meaning ‘strongly disagree’, to 2, meaning ‘strongly agree’).
DOI: 10.17632/d98r7czmhr.2
title: Green synthesis of spermidine from xylose through combination of enzyme molecular modification and metabolic engineering

description: In this study, the accurate mutant library was constructed by rational design to screen the beneficial mutants in Bacillus amyloliquefaciens PM1 using xylose as substrate. Therein, the spermidine titers of mutants PM1/speDI39A/D22A and PM1/speEI108A/T54A were improved by 53% and 44% compared to the control strain, respectively, and the enzyme activities of the SpeDI39A/D22A and SpeEI108A/T54A increased by 58% and 44% accordingly. The mechanism of the enhanced enzymatic activity was further explained by molecular dynamics simulations. Moreover, the engineering strain PM1::D/E was constructed by combination of speDI39A/D22A and speEI108A/T54A to enhance spermidine pathway. Through fed-batch fermentation, the spermidine titer reached 683.14 mg/L, which was higher than previous reports in shake flask fermentation. This study provides a novel strategy for green synthesis of spermidine from xylose, which will promote the clean and efficient production of spermidine.
DOI: 10.17632/m7zbrr34t4.1
title: Bio-Based Prawn Farming and Byproduct Data: AI-driven Analyses

description: It comprises structured data related to various aspects of prawn farming, including industry insights, production comparisons, AI-driven analyses, and potential applications of byproducts, such as cosmetics. It captures critical information to evaluate the sustainability, efficiency, and market potential of bio-based prawn farming practices. The data is organized across multiple sheets, focusing on key metrics, comparisons, and innovative approaches, providing a comprehensive foundation for research and development in the bio-based aquaculture industry.
DOI: 10.17632/2rn7t3xfgn.1
title: Trace and major elements data for three types of red soils in South China

description: Weathering and recycling controls on rare earth element behavior: A comparative study on granitic, basaltic and eolian red soil crusts, linked to paper submitted to Geochimica and Cosmochimica Acta. Full details can be found in the accompanying paper.
DOI: 10.17632/ght7xs48zn.1
title: Glyoxylate-Tet2

description: Resistance, tolerance and persistence enable pathogenic bacteria to survive antibiotic treatment and are associated with an elevated risk of treatment failure and relapsing infections. The mechanism underlying bacterial antibiotic persister formation is not well understood. Here, we show that glyoxylate, a metabolite originally evolved to allow bacteria to utilize alternative carbon sources for growth, serves as a signaling molecule to reprogram host transcriptome and support persister formation. Specifically, we discovered glyoxylate interacting with TET2 DNA dioxygenase through an in-silico screen of human metabolome. We further show that Salmonella-produced glyoxylate inhibits the activity of Tet2 to suppress the expression of pro-inflammatory genes and attenuate host immune defense. Catalytic inactivation of Tet2, by genetic knock-in mutation, glyoxylate production by Salmonella, or exogenous glyoxylate treatment, facilitates bacterial persister formation in both murine and human macrophages. Conversely, stimulating TET2 with vitamin C or blocking Salmonella production of glyoxylate suppresses bacterial antibiotic resistance and improves the infection treatment outcomes. Our study uncovers a previously unrecognized function of Tet2 in preventing bacterial antibiotic persistence and the function of glyoxylate in reprograming host transcriptome beyond energetic and biosynthetic metabolism. Our findings also suggest that stimulating TET activity represents a potential therapeutic strategy to combat bacterial persistence.
DOI: 10.17632/ght7xs48zn.2
title: Glyoxylate-Tet2

description: Resistance, tolerance and persistence enable pathogenic bacteria to survive antibiotic treatment and are associated with an elevated risk of treatment failure and relapsing infections. The mechanism underlying bacterial antibiotic persister formation is not well understood. Here, we show that glyoxylate, a metabolite originally evolved to allow bacteria to utilize alternative carbon sources for growth, serves as a signaling molecule to reprogram host transcriptome and support persister formation. Specifically, we discovered glyoxylate interacting with TET2 DNA dioxygenase through an in-silico screen of human metabolome. We further show that Salmonella-produced glyoxylate inhibits the activity of Tet2 to suppress the expression of pro-inflammatory genes and attenuate host immune defense. Catalytic inactivation of Tet2, by genetic knock-in mutation, glyoxylate production by Salmonella, or exogenous glyoxylate treatment, facilitates bacterial persister formation in both murine and human macrophages. Conversely, stimulating TET2 with vitamin C or blocking Salmonella production of glyoxylate suppresses bacterial antibiotic resistance and improves the infection treatment outcomes. Our study uncovers a previously unrecognized function of Tet2 in preventing bacterial antibiotic persistence and the function of glyoxylate in reprograming host transcriptome beyond energetic and biosynthetic metabolism. Our findings also suggest that stimulating TET activity represents a potential therapeutic strategy to combat bacterial persistence.
DOI: 10.17632/ght7xs48zn.3
title: Glyoxylate-Tet2

description: Resistance, tolerance and persistence enable pathogenic bacteria to survive antibiotic treatment and are associated with an elevated risk of treatment failure and relapsing infections. The mechanism underlying bacterial antibiotic persister formation is not well understood. Here, we show that glyoxylate, a metabolite originally evolved to allow bacteria to utilize alternative carbon sources for growth, serves as a signaling molecule to reprogram host transcriptome and support persister formation. Specifically, we discovered glyoxylate interacting with TET2 DNA dioxygenase through an in-silico screen of human metabolome. We further show that Salmonella-produced glyoxylate inhibits the activity of Tet2 to suppress the expression of pro-inflammatory genes and attenuate host immune defense. Catalytic inactivation of Tet2, by genetic knock-in mutation, glyoxylate production by Salmonella, or exogenous glyoxylate treatment, facilitates bacterial persister formation in both murine and human macrophages. Conversely, stimulating TET2 with vitamin C or blocking Salmonella production of glyoxylate suppresses bacterial antibiotic resistance and improves the infection treatment outcomes. Our study uncovers a previously unrecognized function of Tet2 in preventing bacterial antibiotic persistence and the function of glyoxylate in reprograming host transcriptome beyond energetic and biosynthetic metabolism. Our findings also suggest that stimulating TET activity represents a potential therapeutic strategy to combat bacterial persistence.
DOI: 10.17632/znjt5tjm95.1
title: MT data for 3D inversion

description: The data used in the manuscript titled "Revealing Deep Heat Transfer Characteristics of the Yalu River Basin Using Joint Magnetotelluric and Gravity Inversion" is published here.
DOI: 10.17632/2g8bmzkdnv.1
title: Rabbit Achilles tenocytes proliferation: Alamar Blue® assay data for cell cultures with or without high molecular weight hyaluronic acid having a molecular weight range of 1.01-1.8 MDa

description: We present data for the cell proliferation of rabbit Achilles tenocytes isolated from three female New Zealand white rabbits, assessed by the Alamar Blue® proliferation assay, with or without supplementation of high molecular weight hyaluronic acid (HMW HA). For HMW HA supplementation, a physiological concentration of 1.4 mg/mL was applied. In detail, standard curves of Alamar Blue® assay are provided, and fluorescence intensities as well as calculated cell numbers for time points 0, 3, 5, 7 and 14 days of in vitro culture, respectively. Furthermore, calculated doubling times are given.
DOI: 10.17632/jyjrnrbp3y.1
title: Biodegradation pathway and mechanism of Lysinibacillus sphaericus 38-6 on triphenylmethane dye aniline blue

description: In this study, an aniline blue degrading bacterium was isolated from soil and identified as Lysinibacillus sp. by molecular biology. Moreover, we sequenced and annotated its genome, and analyzed its strategies for dye decomposition at the genomic level to provide insight into the mechanism of dye decomposition for guiding the development of its new applications.
DOI: 10.17632/m8mkgn3x6k
title: Latyan Watershed Data1

description: The hydrometric (sediment concentration and flow discharge) data of the Roudak Station of the Latyan watersheds, Tehran province, Iran. Also the estimated rainfall and snowmelt-runoff erosivities of the climatological station inside and around the watershed.
DOI: 10.17632/m8mkgn3x6k.1
title: Latyan Watershed Data1

description: The hydrometric (sediment concentration and flow discharge) data of the Roudak Station of the Latyan watersheds, Tehran province, Iran. Also the estimated rainfall and snowmelt-runoff erosivities of the climatological station inside and around the watershed.
DOI: 10.17632/bd5h8jt6f9.1
title: The Chimeric Genomes Whisper the Elusive Birth of Oropouche and Oropouche-like Viruses

description: Records of the online distant BLAST execution, which identified non-viral hits, also included the execution date for each file.
DOI: 10.15468/dl.g5xsag
title: Occurrence Download

description: A dataset containing 198939 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CZE.11_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Passeriformes",
 "Year 1994-2023"
 ]
}

 The dataset includes 198939 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062610-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/3pyh9jpgzg.1
title: Supporting information for Antúnez & Ricker 2025 in Ecology and Evolution

description: The Excel file represents the supporting information for the article of Antúnez & Ricker (2025) in the journal "Ecology and Evolution". It contains three sheets: "S1a Raw data", "S1b Regression parameters", and "S1c Limits for symmetry".
DOI: 10.17632/s7k4vfs2mm.1
title: Research on energy management strategy of MRMT with HESS

description: It's the experimental data from Research on energy management strategy of MRMT with HESS.
DOI: 10.5517/ccdc.csd.cc2jc165
title: CCDC 2334306: Experimental Crystal Structure Determination

description: Related Article: D.O. Charkin, A.M. Banaru, S.A. Ivanov, V.E. Kireev, S.M. Aksenov|2024|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|80|706|doi:10.1107/S2052520624007443
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jc176
title: CCDC 2334307: Experimental Crystal Structure Determination

description: Related Article: D.O. Charkin, A.M. Banaru, S.A. Ivanov, V.E. Kireev, S.M. Aksenov|2024|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|80|706|doi:10.1107/S2052520624007443
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l1dln
title: CCDC 2384631: Experimental Crystal Structure Determination

description: Related Article: Morgan E. John, Daven Foster, Stephen A. Moggach, George A. Koutsantonis, Reto Dorta, Scott G. Stewart|2024|Org.Process Res.Dev.|28|4485|doi:10.1021/acs.oprd.4c00408
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.