cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc229tmv
title: CCDC 1916067: Experimental Crystal Structure Determination

description: Related Article: Michael R. George, Paul E. Critchley, George F.S. Whitehead, Andrew J. Bailey, Francesco Cuda, Benedict N. Murdin, Martin C. Grossel, Richard J. Curry|2021|J.Lumin.|230|117715|doi:10.1016/j.jlumin.2020.117715
DOI: 10.5517/ccdc.csd.cc229tnw
title: CCDC 1916068: Experimental Crystal Structure Determination

description: Related Article: Michael R. George, Paul E. Critchley, George F.S. Whitehead, Andrew J. Bailey, Francesco Cuda, Benedict N. Murdin, Martin C. Grossel, Richard J. Curry|2021|J.Lumin.|230|117715|doi:10.1016/j.jlumin.2020.117715
DOI: 10.5517/ccdc.csd.cc25bnz5
title: CCDC 2006257: Experimental Crystal Structure Determination

description: Related Article: Li-Juan Han, Ya-Jie Kong, Ya-Yun Xu, Meng-Meng Huang|2021|Polyhedron|193|114868|doi:10.1016/j.poly.2020.114868
DOI: 10.5517/ccdc.csd.cc25h0tj
title: CCDC 2010437: Experimental Crystal Structure Determination

description: Related Article: Hao Qi, Zifeng Zhao, Ge Zhan, Boxun Sun, Wenchao Yan, Chengbo Wang, Liding Wang, Zhiwei Liu, Zuqiang Bian, Chunhui Huang|2020|Inorg.Chem.Front.|7|4593|doi:10.1039/D0QI00762E
DOI: 10.5517/ccdc.csd.cc25h0vk
title: CCDC 2010438: Experimental Crystal Structure Determination

description: Related Article: Hao Qi, Zifeng Zhao, Ge Zhan, Boxun Sun, Wenchao Yan, Chengbo Wang, Liding Wang, Zhiwei Liu, Zuqiang Bian, Chunhui Huang|2020|Inorg.Chem.Front.|7|4593|doi:10.1039/D0QI00762E
DOI: 10.5517/ccdc.csd.cc25h0wl
title: CCDC 2010439: Experimental Crystal Structure Determination

description: Related Article: Hao Qi, Zifeng Zhao, Ge Zhan, Boxun Sun, Wenchao Yan, Chengbo Wang, Liding Wang, Zhiwei Liu, Zuqiang Bian, Chunhui Huang|2020|Inorg.Chem.Front.|7|4593|doi:10.1039/D0QI00762E
DOI: 10.5517/ccdc.csd.cc25l644
title: CCDC 2013485: Experimental Crystal Structure Determination

description: Related Article: Marta Romaniszyn, Lesław Sieroń, Łukasz Albrecht|2020|Org.Biomol.Chem.|18|8633|doi:10.1039/D0OB01750G
DOI: 10.5281/zenodo.4299213
title: chameleon cholesky at tupi1 - native

description: git-annex in vgpinto@tupi1:/scratch/vgpinto/perf-ev-341074
DOI: 10.5517/ccdc.csd.cc25trqh
title: CCDC 2020757: Experimental Crystal Structure Determination

description: Related Article: Nikki A. Thiele, David J. Fiszbein, Joshua J. Woods, Justin J. Wilson|2020|Inorg.Chem.|59|16522|doi:10.1021/acs.inorgchem.0c02413
DOI: 10.5281/zenodo.4299212
title: chameleon cholesky at tupi1 - native

description: git-annex in vgpinto@tupi1:/scratch/vgpinto/perf-ev-341074
DOI: 10.5517/ccdc.csd.cc25trrj
title: CCDC 2020758: Experimental Crystal Structure Determination

description: Related Article: Nikki A. Thiele, David J. Fiszbein, Joshua J. Woods, Justin J. Wilson|2020|Inorg.Chem.|59|16522|doi:10.1021/acs.inorgchem.0c02413
DOI: 10.5517/ccdc.csd.cc25trsk
title: CCDC 2020759: Experimental Crystal Structure Determination

description: Related Article: Nikki A. Thiele, David J. Fiszbein, Joshua J. Woods, Justin J. Wilson|2020|Inorg.Chem.|59|16522|doi:10.1021/acs.inorgchem.0c02413
DOI: 10.5517/ccdc.csd.cc25vgp6
title: CCDC 2021438: Experimental Crystal Structure Determination

description: Related Article: Hui Chang, Shuangquan Yao, Xiena Kang, Xiya Zhang, Ningning Ma, Meiyun Zhang, Xinping Li, Zhao Zhang|2020|Inorg.Chem.|59|16611|doi:10.1021/acs.inorgchem.0c02518
DOI: 10.5517/ccdc.csd.cc25y4v4
title: CCDC 2024016: Experimental Crystal Structure Determination

description: Related Article: Yanay Popowski, Juan J. Moreno, Asa W. Nichols, Shelby L. Hooe, Caitlin J. Bouchey, Nigam P. Rath, Charles W. Machan, William B. Tolman|2020|Chem.Commun.|56|14027|doi:10.1039/D0CC05652A
DOI: 10.5517/ccdc.csd.cc25y4w5
title: CCDC 2024017: Experimental Crystal Structure Determination

description: Related Article: Yanay Popowski, Juan J. Moreno, Asa W. Nichols, Shelby L. Hooe, Caitlin J. Bouchey, Nigam P. Rath, Charles W. Machan, William B. Tolman|2020|Chem.Commun.|56|14027|doi:10.1039/D0CC05652A
DOI: 10.5517/ccdc.csd.cc25y4x6
title: CCDC 2024018: Experimental Crystal Structure Determination

description: Related Article: Yanay Popowski, Juan J. Moreno, Asa W. Nichols, Shelby L. Hooe, Caitlin J. Bouchey, Nigam P. Rath, Charles W. Machan, William B. Tolman|2020|Chem.Commun.|56|14027|doi:10.1039/D0CC05652A
DOI: 10.5517/ccdc.csd.cc25y4y7
title: CCDC 2024019: Experimental Crystal Structure Determination

description: Related Article: Yanay Popowski, Juan J. Moreno, Asa W. Nichols, Shelby L. Hooe, Caitlin J. Bouchey, Nigam P. Rath, Charles W. Machan, William B. Tolman|2020|Chem.Commun.|56|14027|doi:10.1039/D0CC05652A
DOI: 10.6084/m9.figshare.13309049
title: Gene clusters potentially associated with environmental adaptation, bioremediation, biocontrol, and plant-growth promotion in H. alvei A23BA

description: Gene clusters potentially associated with environmental adaptation, bioremediation, biocontrol, and plant-growth promotion in <i>H. alvei</i> A23BA
DOI: 10.5281/zenodo.4299228
title: SeaFlow data: optical properties of single celled phytoplankton + auxillary physical data

description: The file contains two data types: <strong>CRUISENAME</strong><strong>_bio.parquet</strong>: contains optical properties of single celled phytoplankton measured by SeaFlow (namely <em>Prochlorococcus</em>, <em>Synechococcus</em> and picoeukaryotes), which includes forward light scattering, red and orange fluorescence measured in surface waters (~ 5 m depth) during each oceanographic cruise. The datasets has been sub-sampled to include 10% of the original data. <strong>CRUISENAME</strong><strong>_phys.parquet</strong>: contains location of the SeaFlow data, along with sea surface temperature and salinity measured during the cruises. For full description of the dataset, please read Ribalet et al. 2019.
description: This work was supported by grants from the Simons Foundation (#574495 to FR) and the National Aeronautics and Space Administration (#80NSSC17K0561 to FR)
DOI: 10.15468/dl.hahmgg
title: Occurrence Download

description: A dataset listing the 72185 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Malaysia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 72185 records were derived from 903 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021697-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.13294381
title: Additional file 11 of Genomics and lipidomics analysis of the biotechnologically important oleaginous red yeast Rhodotorula glutinis ZHK provides new insights into its lipid and carotenoid metabolism

description: Additional file 11. CDS/cDNA sequences resulted from genome analysis.
DOI: 10.6084/m9.figshare.20116936
title: Long non-coding RNA-X-inactive specific transcript inhibits cell viability, and induces apoptosis through the microRNA-30c-5p/Bcl2-like protein 11 signaling axis in human granulosa-like tumor cells

description: The role of long noncoding RNAs (lncRNAs) is being actively explored in polycystic ovary syndrome (PCOS). Recent research has shown that long non-coding RNA (lncRNA) X–inactive Specific Transcript (XIST) is overexpressed in patients with PCOS and is associated with poor pregnancy outcomes. However, the precise function and mechanism of action of lncRNA XIST in PCOS are unknown. We aimed to determine whether lncRNA XIST contributes to PCOS by modulating ovarian granulosa cell physiology. We also investigated any potential molecular regulatory mechanisms. In this study, we discovered that the lncRNA XIST was significantly downregulated in human ovarian granulosa-like tumor (KGN) cells. Notably, overexpression of lncRNA XIST decreased miR-30c-5p expression in KGN cells, inhibited proliferation, and induced apoptosis in KGN cells. However, cotransfection with amiR-30c-5p mimic significantly reduced these effects. Additionally, we discovered that the miR-30c-5p mimic effectively inhibited Bcl2-like protein 11 (BCL2L11) expression, a critical apoptotic promoter, whereas silencing of miR-30c-5p increased BCL2L11 expression, inhibited KGN cell proliferation, and induced apoptosis. In contrast, cotransfection of BCL2L11 with siRNA significantly reversed these effects. In conclusion, this study established that lncRNA XIST plays a critical role in PCOS by modulating the miR-30c-5p/BCL2L11 signaling axis and regulating ovarian granulosa cell physiology.
DOI: 10.6084/m9.figshare.13294405
title: Additional file 7 of Genomics and lipidomics analysis of the biotechnologically important oleaginous red yeast Rhodotorula glutinis ZHK provides new insights into its lipid and carotenoid metabolism

description: Additional file 7. Annotations of species-specific genes of the ZHK.
DOI: 10.6084/m9.figshare.23788304
title: Additional file 1 of Diagnostic value and immune infiltration characterization of YTHDF2 as a critical m6A regulator in osteoarthritic synovitis

description: Additional file 1: The list of differential genes between subtypes.
DOI: 10.6084/m9.figshare.23788307
title: Additional file 2 of Diagnostic value and immune infiltration characterization of YTHDF2 as a critical m6A regulator in osteoarthritic synovitis

description: Additional file 2: The list of macrophage-related genes.
DOI: 10.6084/m9.figshare.9631769.v1
title: Additional file 1: of Signatures of differential selection in chloroplast genome between japonica and indica

description: Table S1. Summarize the information of the total samples. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.9631796.v1
title: Additional file 5: of Signatures of differential selection in chloroplast genome between japonica and indica

description: Table S5. Comparison of nucleotide diversity of indica, O. rufipogon, O. nivara and japonica. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.9631817.v1
title: Additional file 8: of Signatures of differential selection in chloroplast genome between japonica and indica

description: Table S8. Allele frequency information of indica, temperate japonica and tropical japonica. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.13294405.v1
title: Additional file 7 of Genomics and lipidomics analysis of the biotechnologically important oleaginous red yeast Rhodotorula glutinis ZHK provides new insights into its lipid and carotenoid metabolism

description: Additional file 7. Annotations of species-specific genes of the ZHK.
DOI: 10.6084/m9.figshare.22214487.v1
title: PREDICTION OF DEM PARAMETERS OF COATED FERTILIZER PARTICLES BASED ON GA-BP NEURAL NETWORK

description: ABSTRACT To provide an efficient and reliable calibration method with reduced time cost and increased accuracy, the angle of repose (AoR) in the simulation is batch-processed based on Python and the GA-BP neural network is used to improve the prediction accuracy of the DEM parameters of coated fertilizer particles. The single-factor test data were firstly interpolated to obtain sufficient training samples, thus avoiding the drawback that the BP network tends to fall into the local minimum during the training process. Then the GA-BP neural network was trained in combination with the orthogonal combination test, and the fitted correlation coefficients were all greater than 0.975, indicating that the algorithm has strong generalization performance and good stability. The predicted values matched the expected output values, indicating that the GA-BP neural network can accurately predict the nonlinear function output, and the network predicted output can be approximated as the actual output of the function. With the actual AoR as the output value, the simulation value of the AoR was obtained as 24.457° when the coefficient of restitution (CoR), coefficient of static friction (CoSF), and coefficient of rolling friction (CoRF) were 0.509, 0.176, and 0.0332, respectively, and the relative error with the actual value was 0.068%, indicating that the well-fitted GA-BP neural network could accurately predict the DEM parameters of fertilizer particles.
DOI: 10.6084/m9.figshare.13294408
title: Additional file 8 of Genomics and lipidomics analysis of the biotechnologically important oleaginous red yeast Rhodotorula glutinis ZHK provides new insights into its lipid and carotenoid metabolism

description: Additional file 8. One-to-one orthologous genes between R. glutinis ZHK and its close related species R. toruloides, R. graminis, R. diobovata and R. taiwanensis.
DOI: 10.6084/m9.figshare.13294411.v1
title: Additional file 9 of Genomics and lipidomics analysis of the biotechnologically important oleaginous red yeast Rhodotorula glutinis ZHK provides new insights into its lipid and carotenoid metabolism

description: Additional file 9. Ka/Ks results of single-copy orthologous genes.
DOI: 10.6084/m9.figshare.13294390.v1
title: Additional file 2 of Genomics and lipidomics analysis of the biotechnologically important oleaginous red yeast Rhodotorula glutinis ZHK provides new insights into its lipid and carotenoid metabolism

description: Additional file 2. All genes expression profile resulted from RNA-seq analysis.
DOI: 10.6084/m9.figshare.19068693
title: Additional file 1 of High-resolution genomic surveillance elucidates a multilayered hierarchical transfer of resistance between WWTP- and human/animal-associated bacteria

description: Additional file 1: Supplementary Table 1. Quality evaluation of the assembled MDR isolates (82 in total).
DOI: 10.6084/m9.figshare.13294540
title: Additional file 1 of Genetic analysis of rice seedling traits related to machine transplanting under different seeding densities

description: Additional file 1: Table S1.Genotypes for all 2778 bins for the 213 RILs from the 9311/Nipponbare cross based on high quality SNPs. AA, Nipponbare genotype; BB, 9311 genotype; AB, heterozygous genotype. The position represents the physical position of each bin. Table S2. Phenotypic variation of the RIL population of 9311/Nipponbare cross among three seeding densities. SH, seedling height (cm); FLSL, first leaf sheath length (cm); FLL, first leaf length (cm); SLL, second leaf length (cm); SDW, shoot dry weight (mg); RDW, root dry weight (mg). Table S3. Correlation analyses among different seedling traits. LD, low density; MD, medium density; HD, high density; Ex1, Ex2 and Ex3 indicated the three experiments, respectively. SH, seedling height; FLSL, first leaf sheath length; FLL, first leaf length; SLL, second leaf length; SDW, shoot dry weight; RDW, root dry weight. * and ** indicated significant at P ≤ 0.05 and P ≤ 0.01, respectively. Table S4. The QTLs identified for seedling traits from the RIL population of 9311/Nipponbare cross under three seeding densities. LD, low density; MD, medium density; HD, high density; SH, seedling height; FLSL, first leaf sheath length; FLL, first leaf length; SLL, second leaf length; SDW, shoot dry weight; RDW, root dry weight. The position is the lod peak of each QTL. The interval is 1.5-LOD support interval of the QTL. Positive and negative additive effect values indicate that the allele from NIP and 9311 increase trait values, respectively. The Var is variation (%) explained by each QTL. Table S5. Additive effects of each bin under three seeding densities. A_score, additive effect, in which positive values indicate that alleles from NIP are in the direction of increasing the trait scores, and negative values indicate that alleles from 9311 are in the direction of increasing the score. NA, NIP and 9311 indicated the additive effect non-significant, positive significant and negative significant, respectively. LD, low density; MD, medium density; HD, high density; SH, seedling height; FLSL, first leaf sheath length; FLL, first leaf length; SLL, second leaf length; SDW, shoot dry weight; RDW, root dry weight. Table S6. Two-locus combinations showing significant epistatic effects under three seeding densities. LD, low density; MD, medium density; HD, high density; SH, seedling height; FLSL, first leaf sheath length; FLL, first leaf length; SLL, second leaf length; SDW, shoot dry weight; RDW, root dry weight. Var, the percentage (%) of variation explained by the interaction.
DOI: 10.6084/m9.figshare.13294540.v1
title: Additional file 1 of Genetic analysis of rice seedling traits related to machine transplanting under different seeding densities

description: Additional file 1: Table S1.Genotypes for all 2778 bins for the 213 RILs from the 9311/Nipponbare cross based on high quality SNPs. AA, Nipponbare genotype; BB, 9311 genotype; AB, heterozygous genotype. The position represents the physical position of each bin. Table S2. Phenotypic variation of the RIL population of 9311/Nipponbare cross among three seeding densities. SH, seedling height (cm); FLSL, first leaf sheath length (cm); FLL, first leaf length (cm); SLL, second leaf length (cm); SDW, shoot dry weight (mg); RDW, root dry weight (mg). Table S3. Correlation analyses among different seedling traits. LD, low density; MD, medium density; HD, high density; Ex1, Ex2 and Ex3 indicated the three experiments, respectively. SH, seedling height; FLSL, first leaf sheath length; FLL, first leaf length; SLL, second leaf length; SDW, shoot dry weight; RDW, root dry weight. * and ** indicated significant at P ≤ 0.05 and P ≤ 0.01, respectively. Table S4. The QTLs identified for seedling traits from the RIL population of 9311/Nipponbare cross under three seeding densities. LD, low density; MD, medium density; HD, high density; SH, seedling height; FLSL, first leaf sheath length; FLL, first leaf length; SLL, second leaf length; SDW, shoot dry weight; RDW, root dry weight. The position is the lod peak of each QTL. The interval is 1.5-LOD support interval of the QTL. Positive and negative additive effect values indicate that the allele from NIP and 9311 increase trait values, respectively. The Var is variation (%) explained by each QTL. Table S5. Additive effects of each bin under three seeding densities. A_score, additive effect, in which positive values indicate that alleles from NIP are in the direction of increasing the trait scores, and negative values indicate that alleles from 9311 are in the direction of increasing the score. NA, NIP and 9311 indicated the additive effect non-significant, positive significant and negative significant, respectively. LD, low density; MD, medium density; HD, high density; SH, seedling height; FLSL, first leaf sheath length; FLL, first leaf length; SLL, second leaf length; SDW, shoot dry weight; RDW, root dry weight. Table S6. Two-locus combinations showing significant epistatic effects under three seeding densities. LD, low density; MD, medium density; HD, high density; SH, seedling height; FLSL, first leaf sheath length; FLL, first leaf length; SLL, second leaf length; SDW, shoot dry weight; RDW, root dry weight. Var, the percentage (%) of variation explained by the interaction.
DOI: 10.6084/m9.figshare.23788289
title: Additional file 2 of Rising trends in the burden of migraine and tension-type headache among adolescents and young adults globally, 1990 to 2019

description: Additional file 2.
DOI: 10.6084/m9.figshare.23788289.v1
title: Additional file 2 of Rising trends in the burden of migraine and tension-type headache among adolescents and young adults globally, 1990 to 2019

description: Additional file 2.
DOI: 10.5281/zenodo.10653826
title: Data used in Wintermantel et al. 2022 Flowering resources modulate the sensitivity of bumblebees to a common fungicide. Science of the Total Environment

description: This is the data used in Wintermantel et al. 2022 Flowering resources modulate the sensitivity of bumblebees to a common fungicide. Science of the total Environment.
DOI: 10.5281/zenodo.10653827
title: Data used in Wintermantel et al. 2022 Flowering resources modulate the sensitivity of bumblebees to a common fungicide. Science of the Total Environment

description: This is the data used in Wintermantel et al. 2022 Flowering resources modulate the sensitivity of bumblebees to a common fungicide. Science of the total Environment.
DOI: 10.6084/m9.figshare.13294384.v1
title: Additional file 12 of Genomics and lipidomics analysis of the biotechnologically important oleaginous red yeast Rhodotorula glutinis ZHK provides new insights into its lipid and carotenoid metabolism

description: Additional file 12. Annotations of all gene resulted from assembled ZHK genome.
DOI: 10.6084/m9.figshare.19068714
title: Additional file 5 of High-resolution genomic surveillance elucidates a multilayered hierarchical transfer of resistance between WWTP- and human/animal-associated bacteria

description: Additional file 5: Supplementary Table 5. Summary of the most closely related isolates to WWTP Escherichia flexneri and Klebsiella pneumoniae in public NCBI datasets.
DOI: 10.6084/m9.figshare.13294399.v1
title: Additional file 5 of Genomics and lipidomics analysis of the biotechnologically important oleaginous red yeast Rhodotorula glutinis ZHK provides new insights into its lipid and carotenoid metabolism

description: Additional file 5. All the genes involved in the biosynthesis of antibiotics in the ZHK genome.
DOI: 10.6084/m9.figshare.13294408.v1
title: Additional file 8 of Genomics and lipidomics analysis of the biotechnologically important oleaginous red yeast Rhodotorula glutinis ZHK provides new insights into its lipid and carotenoid metabolism

description: Additional file 8. One-to-one orthologous genes between R. glutinis ZHK and its close related species R. toruloides, R. graminis, R. diobovata and R. taiwanensis.
DOI: 10.6084/m9.figshare.19068723.v1
title: Additional file 6 of High-resolution genomic surveillance elucidates a multilayered hierarchical transfer of resistance between WWTP- and human/animal-associated bacteria

description: Additional file 6: Supplementary Table 6. Summary of all the detected ARGs.
DOI: 10.6084/m9.figshare.19068726
title: Additional file 7 of High-resolution genomic surveillance elucidates a multilayered hierarchical transfer of resistance between WWTP- and human/animal-associated bacteria

description: Additional file 7: Supplementary Table 7. Wide dissemination of WWTP plasmids carrying dynamic ARGs.
DOI: 10.6084/m9.figshare.19068726.v1
title: Additional file 7 of High-resolution genomic surveillance elucidates a multilayered hierarchical transfer of resistance between WWTP- and human/animal-associated bacteria

description: Additional file 7: Supplementary Table 7. Wide dissemination of WWTP plasmids carrying dynamic ARGs.
DOI: 10.6084/m9.figshare.9631562.v1
title: Additional file 10: of Genetic determinants controlling maize rubisco activase gene expression and a comparison with rice counterparts

description: Table S7. Cis-acting elements in the RCA promoter region of C3 and C4 species. (XLSX 12 kb)