cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/fkxgjyfjxf
title: ASP: Automated symbolic computation of approximate symmetries of differential equations

description: Abstract A recent paper (Pakdemirli et al. (2004) [12]) compared three methods of determining approximate symmetries of differential equations. Two of these methods are well known and involve either a perturbation of the classical Lie symmetry generator of the differential system (Baikov, Gazizov and Ibragimov (1988) [7], Ibragimov (1996) [6]) or a perturbation of the dependent variable/s and subsequent determination of the classical Lie point symmetries of the resulting coupled system (Fushchych and ... Title of program: ASP Catalogue Id: AEOG_v1_0 Nature of problem Calculates approximate symmetries for differential equations using any of the three methods as proposed by Baikov, Gazizov and Ibragimov [1,2], Fushchych and Shtelen [3] or Pakdemirli, Yürüsoy and Dolapci [4]. Package includes an altered version of the DESOLVII package (Vu, Jefferson and Carminati [5]). Versions of this program held in the CPC repository in Mendeley Data AEOG_v1_0; ASP; 10.1016/j.cpc.2012.11.012 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/n4rp4h55dz
title: Journal of Iran's Economic Essays; "Jostarhaye Eghtesadiye Iran; No. 15

description: Journal of Economic Essays; an Islamic approach (JEE) is an open-access double-blind peer-reviewed academic quarterly journal that publishes original research, written with an Islamic approach in various Economic areas including Islamic economics and finance, Iran's economy, Fiqh (Islamic jurisprudence) and economics, philosophy of economics, economic theory, ethics and business, Islamic banking, economic development, and social security institution in Islam. JEE especially welcomes comparative articles that study the western and Muslim scholars' viewpoints about important economic issues to find the best answer to theoretical and applied questions and also to explore their differences and similarities with the aim of bringing them closer to each other. This journal accepts analytical articles that reread Muslim scholars' ideas according to new approaches in economics, moral philosophy, Islamic banking and finance, social security, econometrics, and Islamic economic institutions. Therefore, it aims to serve the interests of a wide range of thoughtful and academic readers, economists, philosophers, theologians, banking and finance experts and others interested in the multidisciplinary study of economics and Islam (including Fiqh "Islamic jurisprudence"). We hope that this publication creates an atmosphere of constructive dialogue on different economic topics between national and international scholars by which it could have a role in the growth of Islamic economic thought in Iran. In addition, Islamic solutions to the economic problems of Iran and the world will be examined and analyzed, and they will be presented to the policy makers to help improve the Islamic economic system.

Major Topics

 The Journal publishes papers, including the following fields:

- Islamic economics and finance;

 - Iran's economy;

 - Fiqh (Islamic jurisprudence) and economics;

 - Philosophy of economics;

 - Economic theory;

 - Ethics;

- Islamic economic institutions

 - Islamic banking;

 - Economic development;

- Social security.
DOI: 10.6084/m9.figshare.28092218.v1
title: Ursula bacteriophage genome sequence in Genbank format

description: A full genomic sequence of Ursula bacteriophage, annotated
DOI: 10.17632/wz8jzcndwx
title: Splash induced soil data

description: This dataset includes three sheets. Sheet of “total splash soil weight” covers the total splash soil weight of two types of soils calcareous soil and purple soil. Sheet of “WDC WRC NDC” covers the relative percentage of each clay type to total clay (%).Sheet of “Soil binding agents” covers the data of soil organic matter content (SOM), free Fe oxides, Amorphous Fe oxides, and Chelated Fe oxides contents of two types of soils.
DOI: 10.6084/m9.figshare.20510862.v1
title: delias_pasithoe_zanfona_1.fasta.gz

description: .......
DOI: 10.17632/pf38g2x8sx
title: Disposal of Unused and Expired Medicines in Ga South Municipality, Ghana

description: This dataset presents a cross-sectional study on the disposal practices of unused or expired medications among residents in Ga Central Municipality, Ghana, which serves as a Take-Back-Unwanted-Medicines (TBUM) location. Data collection occurred from October 2021 to January 2022, involving 426 community members and utilizing pretested structured questionnaires via Kobo Collect. The dataset encompasses 93 variables, including socio-demographic factors, health system factors , and individual-level characteristics such as knowledge, attitude, and awareness.
The main outcome assessed was whether individuals had disposed of expired or unused medications in the previous 12 months, categorized as either having disposed of them or not. A secondary outcome examined the method of disposal, classified as either home-based or organized (such as returning medications to designated collection points at pharmacies). Additional variables were created to measure knowledge levels, attitudes, and awareness regarding medication disposal
DOI: 10.17632/vc6vwbrzs4
title: Jack of all trades: genome assembly of Wild Jack and comparative genomics of Artocarpus

description: This dataset comprises all the annotation sequences, figures and other relevant data incorporated in the manuscript.
Abstract:
Artocarpus (Moraceae), known as breadfruits for their diverse nutritious fruits, is prized for its high-quality timber, medicinal value, and economic importance. Breadfruits are native to Southeast Asia but have been introduced to other continents. The most commonly cultivated species are Artocarpus heterophyllus (Jackfruit) and Artocarpus altilis (Breadfruit). With numerous smaller but nutritionally comparable fruits on a larger tree, Artocarpus hirsutus, also called "Wild jack" or "Ayani", is an elusive forest species endemic to Indian Western Ghats. In this study, we sequenced and assembled the whole genome of Artocarpus hirsutus sampled from the sacred groves of Coorg, India. To decipher demographic and evolutionary history, we compared our Wild jack genome with previously published Jackfruit and Breadfruit genomes. Demographic history reconstruction indicates a stronger effect of habitat rather than phylogeny on the population histories of these plants. Repetitive genomic regions, especially LTR Copia, strongly affected the demographic trajectory of A. heterophyllus. Upon further investigation, we found a recent lineage-specific accumulation of LTR Copia in A. heterophyllus, which had a major contribution to its larger genome size. Several genes from starch, sucrose metabolism, and plant hormone signal transduction pathways, in Artocarpus species, had signatures of selection and gene family evolution. Our comparative genomic framework provides important insights by incorporating endemic species such as the Wild jack.
DOI: 10.17632/pgmcmfb243
title: Dataset for C-O bond activation using ultra-low loading noble metal catalysts on moderately reducible oxides

description: Selective C-O activation of complex multifunctional molecules is an essential step for many important chemical processes. Although reducible metal oxides are active and selective towards reductive C-O bond scission via the reverse Mars-van Krevelen mechanism, the most active oxides undergo bulk reduction during reaction. Here, we report a strategy for C-O bonds activation by surface doping moderately reducible oxides with ultra-low loading of noble metals. We demonstrate the principle using highly dispersed Pt anchored onto TiO2 for furfuryl alcohol conversion to methyl furan. A combination of density functional theory calculations, catalyst characterization (STEM, EPR, FTIR and XAS), kinetic experiments, and microkinetic modelling expose significant C-O activation rate enhancement, without either bulk catalyst reduction or unselective ring hydrogenation. A methodology is introduced to quantify various types of sites, revealing that the cationic redox Pt on TiO2 surface is more active than metallic sites for C-O bond activation.
DOI: 10.17632/86gswchptf
title: Forensic Genetic Genealogy Project

description: This research attempts to collect all publicly available information concerning cases that were successfully cleared through FGG, going back as far as possible in time and ending on December 31, 2020. Cases were selected for inclusion in the sample through internet searches, discussion boards related to genetic genealogy, missing persons, and cold cases, as well as press releases and blog posts from private companies and non-profit organizations known to perform FGG, publications devoted to advances in forensic science, and published court records. Attempts were made to confirm each piece of data collected through three separate sources, whenever this was possible. 

Cases were chosen for inclusion in the sample only if a public authority had confirmed that FGG was used to clear the investigation, and the investigation met the following definition of FGG:

1. Investigative Body: The investigation was led by a public, and not a private, authority, such as a law enforcement agency or a coroner/medical examiner’s office. 

2. Investigative Techniques: The investigation must use the techniques of genomics, computer database technologies, and traditional genealogy. Cases were included when family lineages were drawn out to at least three or more generations. The sample includes investigations that use Y-chromosome STR profiles and/or mitochondrial DNA profiles to trace the paternal and maternal lineages of persons of interest. Cases solved through familial searching of law enforcement databases were excluded from the sample, as this technique raises separate legal and ethical issues. 

3. Investigative Purpose: The investigation must be for a forensic purpose, meaning that the evidence thus produced is relevant to an ongoing legal dispute. Most cases considered here are for the identification of perpetrators of criminal offences or the identification of decedents but can also include the identification of living does. Not included in this data are cases that are of purely historical interest, or the identification of unknown soldiers by military authorities. The term ‘forensic genetic genealogy’ has been chosen for this project in preference to the broader, and more generic term ‘investigative genetic genealogy’, which has also been used, to highlight the fact that these investigations are directed towards an ongoing legal dispute before the public legal system.  

4. Causation: This database only includes cases that have been successfully cleared using FGG. The resolution of any investigation – particularly very large and lengthy investigations as were many of the cases described in this data – has many causes. To be included here, the FGG investigation must have played a significant causal role in the resolution of the case.
DOI: 10.6084/m9.figshare.5718334.v1
title: Interactive effects of genotype x environment on the live weight of GIFT Nile tilapias

description: ABSTRACT In this paper, the existence of a genotype x environment interaction for the average daily weight in GIFT Nile tilapia (Oreochromis niloticus) in different regions in the state of Paraná (Brazil) was analyzed. The heritability results were high in the uni-characteristic analysis: 0.71, 0.72 and 0.67 for the cities of Palotina (PL), Floriano (FL) and Diamond North (DN), respectively. Genetic correlations estimated in bivariate analyzes were weak with values between 0.12 for PL-FL, 0.06 for PL and 0.23 for DN-FL-DN. The Spearman correlation values were low, which indicated a change in ranking in the selection of animals in different environments in the study. There was heterogeneity in the phenotypic variance among the three regions and heterogeneity in the residual variance between PL and DN. The direct genetic gain was greater for the region with a DN value gain of 198.24 g/generation, followed by FL (98.73 g/generation) and finally PL (98.73 g/generation). The indirect genetic gains were lower than 0.37 and greater than 0.02 g/generation. The evidence of the genotype x environment interaction was verified, which indicated the phenotypic heterogeneity of the variances among the three regions, weak genetic correlation and modified rankings in the different environments.
DOI: 10.17632/ckm2rn67p5
title: Batemans Bay Data

description: Modelling study on the sediment dynamics and the formation of the flood tide delta near Cullendulla Beach in the Batemans Bay, Australia
DOI: 10.6084/m9.figshare.26778619.v1
title: <b>Single-cell transcriptomic analyses of lncRNA expression patterns and regulatory networks in pancreatic cancer liver metastasis</b>

description: Pancreatic ductal adenocarcinoma (PDAC), with a poor 5-year survival rate, has risen as a leading cause of cancer-related deaths. The molecular landscape of PDAC remains unveiled. This study profiled the expression of long noncoding RNAs (lncRNAs) and their regulatory networks underpinning PDAC progression. Using high-throughput single-cell RNA sequencing (scRNA-seq) on 441,758 cells, we characterized cell-type-specific and conserved expression patterns of lncRNAs in PDAC. Notably, we constructed an updated cell atlas of the PDAC microenvironment. We further clarified the dynamic expression of lncRNAs in heterogeneous ductal cells, unraveling their pivotal roles in diverse biological pathways. This research offers insights into the regulatory mechanisms of lncRNAs responsible for intratumor heterogeneity in PDAC. Our findings may guide future explorations for therapeutic strategies against PDAC.
DOI: 10.17632/hsmt2hvxxv
title: US weapons exported to Iran in 1979

description: We relied in our research on an American report issued by the U.S. Embassy in Tehran, signed by the last American ambassador, William Sullivan. The report was released in 1979 and contains information about the possibility of the U.S. administration providing weapons to the government of Shah Mohammad Reza Pahlavi. The report was originally in Persian, and we translated it into Arabic.

Documents of the Espionage Den, Document No. (123), Volume 11, pp. 290–333 
Confidential 
From: U.S. Embassy, Tehran 
To: U.S. Department of State, Washington D.C. 
Reference: Department of State - 167901 
Subject: Report on the Necessity of Security Assistance
Report on U.S.-Iran Relations within the Framework of Security Assistance Programs
DOI: 10.6084/m9.figshare.24305011.v2
title: Site measurements of soil C and living biomass in the blue carbon ecosystems across China

description: To estimate soil C stocks (SOCS), aboveground and belowground living biomass C stocks of the blue carbon ecosystems in a spatially explicit form across China, I compiled a total of 1,670 measurements of soil C and 1,229 samples of living biomass. The site measurements were accessed here.<br>
DOI: 10.17632/6rpf6r3nvb
title: Modeling The Health Effects of Adding Bicycle & Pedestrian Paths At The Census Tract-Level Supplementary Information

description: Background: Adding additional bicycle and pedestrian paths (BPPs) to an area should lead to improved health outcomes of residents over time. However, quantitatively determining which areas stand to benefit more from BPPs, how many miles of BPPs are needed, and the health outcomes that may be most improved remain open questions.
Objective: Our work provides and evaluates a methodology that offers actionable insight for city-level planners, public health officials, and decision makers tasked with the question: “To what extent will adding specified BPP milage to a census tract improve residents’ health outcomes over time?”
Methods: We conduct factor analysis on data from the American Community Survey (ACS), CDC 500 Cities Project, Strava and BPP location and usage data from two different cities (Norfolk, VA and San Francisco, CA). We construct two city-specific factor models and use an algorithm to predict the expected mean improvement that a specified amount of BPP miles contributes to identified health outcomes.
Results: We show that given a factor model constructed from data from 2011-2015, an amount of additional BPP miles in the year 2016 and a specific census tract, our models forecasts health outcome improvements in 2020 more accurately than two alternative approaches for both Norfolk, VA and San Francisco, CA. Furthermore, for each city we show that the additional accuracy is a statistically significant improvement (P<.001 in every case) compared to the alternate approaches. For Norfolk, VA (n=31 census tracts) our approach estimates, on average, the: (a) % of individuals with high blood pressure in the census tract within 1.49% (0.85), (b) % of individuals with diabetes in the census tract within 1.63% (0.59), and (c) % of individuals who suffer more than two weeks worth of poor physical health days in the census tract within 1.83% (0.57). For San Francisco (n=49 census tracts), our approach estimates, on average, the: (a) % on individuals who suffer a stroke in the census tract within 1.81% (0.52), and (b) rate of % of individuals with diabetes in the census tract within 1.26% (0.91). 
Conclusions: We propose and evaluate a methodology to enable decision-makers to: (1) weigh the extent to which two BPPs of equal cost proposed in different census tracts improve residents’ health outcomes, (2) identify areas where BPPs are unlikely to be effective interventions and other strategies should be employed and (3) quantify the minimum amount of additional bicycle path miles needed to maximize health outcome improvements. Our methodology shows statistically significant improvements, compared to alternative approaches, in historical accuracy for two large cities, for 2016, in different geographic areas and with different demographics.
DOI: 10.17632/bt2fc8tv6g
title: Data for: Effects of a zero exchange biofloc system on the growth performance and health of Nile tilapia at different stocking densities
DOI: 10.6084/m9.figshare.24995963.v1
title: GWAS summary statistics for voice pitch (Fundamental Frequency (F0) median)

description: This repository contains GWAS summary statistics for voice pitch on 7,654 Han Chinese Women (F0final_sma_quartile2.assoc) and the results of a meta-GWAS of the Chinese women with an Icelandic study (meta_pitch_q2case_q2control_1).
DOI: 10.17632/sbwfyh2btr
title: Retron-Eco1 assembles NAD+-hydrolyzing filaments that provide immunity against bacteriophages. Carabias et al (2024)

description: Uncropped images
DOI: 10.6084/m9.figshare.20072117.v1
title: A Chromosome-Level Reference Genome Assembly and Evolution of Dongxiang Wild Rice

description: Dongxiang wild rice (DXWR, Oryza rufipogon Griff.) is the immediate ancestral progenitor of cultivated rice, possessing important gene resources for rice breeding. However, the distribution of DXWR is decreasing rapidly, and no reference genome has been published to date. In this study, we constructed a chromosome-level reference genome of DXWR by Oxford Nanopore Technology (ONT) and High-through chromosome conformation capture (Hi-C). A total of 58.41 Gb clean data were de novo assembled into 231 contigs with the total length of 413.46 Mb and N50 length of 5.18 Mb. These contigs were clustered and ordered onto 12 pseudo-chromosomes covering about 97.39% assembly with Hi-C data, with a scaffold N50 length of 33.47Mb. Moreover, 54.10% of the genome sequences were identified as repeat sequences. 33,862 (94.21%) genes were functionally annotated from a total of predicted 35,942 protein-coding sequences. Compared with other Oryza species, the genes related to disease and cold resistance in DXWR had undergone a large-scale expansion, which may be one of the reasons for the stronger disease resistance and cold resistance of DXWR. Evolution analysis showed that DXWR and O. sativa, O. rufipogon diverged from a common ancestor approximately 0.86 million years ago. The collinearity between DXWR and cultivated rice was high, but there were still some significant structural variations, including a specific inversion on chromosome 11, which may be related to the differentiation of DXWR. The high-quality chromosome-level reference genome of DXWR assembled in this study will become a valuable resource for rice molecular breeding and genetic research in the future.
DOI: 10.6084/m9.figshare.25053329.v1
title: Supplementary Material for: Barriers and facilitators in continuous medical education related to allogeneic stem cell transplantation - a qualitative study of physicians

description: Background 
This study explored qualitatively, in a sample of German hematologists working in clinical allogeneic hematopoietic stem cell transplantation (alloHSCT), the perceptions of barriers and facilitators to participate in continuous medical education (CME), to provide detailed information how to improve participation in CME activities related to alloHSCT which may also apply to other areas of medicine.

Methods
Based on a recruitment campaign of the German Association for Hematopoietic Stem Cell Transplantation (DAG-HSZT), 21 semi-structured telephone interviews were conducted, transcribed, and analyzed using framework analysis.

Results
Three clusters of barriers were identified that explained why alloHSCT physicians may or may not participate in CME: individual constraints (e.g., better networking, young physicians’ being overwhelmed by the complexity of alloHSCT), structural constraints (e.g., time and financial issues, tailoring of CME courses according to the targeted audience), and content-related constraints (e.g., requirement of CME sessions, provision of an overview of CME courses, more flexible offers). We discuss the ten most frequently pronounced issues, including the use of incentives and the need for support at the start of residency, staff shortages, and requirements for learning sessions.

Conclusion
There is a need for a paradigm shift in CME related to alloHSCT towards a more individualized and needs-based approach. Close monitoring of residents' needs and learning progress as well as feedback systems could help to identify suitable CME courses that should be integrated into a stepwise learning system. CME should focus more closely on the specific target population (i.e., residents, fellows, and attendees) to provide training that is tailored to individual CME needs. On-demand courses may help to strike a balance between work and family obligations. Finally, peer-reviewed, up-to-date information platforms should be expanded.
DOI: 10.17632/c29c36n4mr
title: Role of Perceived Parenting Style on Academic motivation, Self Esteem & Anxiety among University Students

description: Study on Role of Perceived Parenting Style on Academic motivation, Self Esteem & Anxiety among University Students
DOI: 10.17632/fgjgv2ymxp
title:  Dataset of quaternary abandoned channel in Tövises bed, Great Hungarian Plain

description: The data represents Multi Proxy paleoenvironmental dataset for the construction of quaternary abandoned channel illuviation history. It is based on a 345 cm long core of undisturbed sediments and include grain-size classes, chronology, loss-on-ignition and magnetic susceptibility datasets.