cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.gd6c8q
title: Occurrence Download

description: A dataset containing 2846 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Ficus thonningii Blume"
 ]
}

 The dataset includes 2846 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000082-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/shnbyd
title: Lungkow & Chefoo

description: Lungkow & Chefoo is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.7910/dvn/orcmoi
title: Kiaochow

description: Kiaochow is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.7910/dvn/asll2q
title: Chungking & Wanhsien

description: Chungking & Wanhsien is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.7910/dvn/bc3t7j
title: Ichang

description: Ichang is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.7910/dvn/x2ztiw
title: Shasi

description: Shasi is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.7910/dvn/teblwc
title: Changsha

description: Changsha is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.7910/dvn/h6owhf
title: Hankow

description: Hankow is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.7910/dvn/djlli2
title: Wuhu

description: Wuhu is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.7910/dvn/cipshk
title: Nanking

description: Nanking is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.7910/dvn/rl6oqv
title: Chinkiang

description: Chinkiang is a series of tables and text files associated with: Annual trade report and returns - 1926. Created by: China. Hai guan zong shui wu si shu
description: Annual trade report and returns - 1926
DOI: 10.22029/jlupub-19060
title: Raw data for shrimp feeding study based on insects reared on plant by-products

description: The dataset contains the raw data of randomized controlled feeding trial, which aimed at testing whether black soldier flies (BSF) reared on widely available but underutilized plant by-products such as cocoa bean shells, depectinized apple pomace and potato peelings may serve as sustainable feeds for Pacific white shrimp (PWS) aquaculture. The dataset consists of four sheets: 1. Raw data for the nutritional profiles of (cocoa bean shells, depectinized apple pomace, potato peelings and a grain-based control feed (FM = fresh matter, DM = dry matter), 2. Raw data for the nutritional profiles of black soldier fly (BSF) larvae reared on cocoa bean shells, depectinized apple pomace, potato peelings and a grain-based control feed (FM = fresh matter, DM = dry matter), 3. Raw data for growth curves, larval development time and final weight of black soldier fly (BSF) larvae reared on three plant by-products (CBS: cocoa bean shells, DAP: depectinized apple pomace, PP: potato peelings) and a grain-based control feed, 4. Raw data for feeding regimes, growth characteristics and feed conversion parameters of Pacific white shrimp (PWS) fed with black soldier fly (BSF) based diets where BSF larvae were reared on cocoa bean shells, depectinized apple pomace, potato peelings and a grain -based control feed.
DOI: 10.5281/zenodo.13941414
title: Data and code accompanying Hasnain, Birnbaum et al., Nature Neuroscience 2024

description: Data and code accompanying Hasnain M, Birnbaum J, Ugarte Nunez JL, Hartman E, Chandramouli C, Economo M (2024).

Electrophysiology data recorded in anterior lateral motor cortex (ALM) and keypoint tracking data from mice performing a two-context task (delayed-response and water-cued).

File organization:

In the data folder, there are 4 subfolders, each containing different datasets:



Ephys_Behavior: electrophysiology and keypoint data for mice performing the two-context task with a static delay length 

RandomizedDelay_Ephys_Behavior: electrophysiology and keypoint data for mice performing the delayed-response task with a randomized delay length.

DelayInhibition_BilatMC_Behavior: keypoint data for mice performing the two-context task while the motor cortex was bilaterally silenced during the delay epoch on a random subset of trials.

GoCueInhibition_BilatMC_Behavior: keypoint data for mice performing thetwo-context task while the motor cortex was bilaterally silenced during the response epoch on a random subset of trials.


There are two types of .mat files:



data_structure_animal_sessiondate.mat: MATLAB struct containing electrophysiology and/or keypoint data for a single session.

motionEnergy_animal_sessiondate.mat: MATLAB struct containing motion energy data and assigned movement threshold for a single session (for behavior-only sessions, motion energy is stored in the data_structure file itself).


______________________________________________________________________________________________________________

See the README in the code folder for more info and instructions on how to use the data and the provided code.

Code can also be found at Github.
DOI: 10.5281/zenodo.13941415
title: Data and code accompanying Hasnain, Birnbaum et al., Nature Neuroscience 2024

description: Data and code accompanying Hasnain M, Birnbaum J, Ugarte Nunez JL, Hartman E, Chandramouli C, Economo M (2024).

Electrophysiology data recorded in anterior lateral motor cortex (ALM) and keypoint tracking data from mice performing a two-context task (delayed-response and water-cued).

File organization:

In the data folder, there are 4 subfolders, each containing different datasets:



Ephys_Behavior: electrophysiology and keypoint data for mice performing the two-context task with a static delay length 

RandomizedDelay_Ephys_Behavior: electrophysiology and keypoint data for mice performing the delayed-response task with a randomized delay length.

DelayInhibition_BilatMC_Behavior: keypoint data for mice performing the two-context task while the motor cortex was bilaterally silenced during the delay epoch on a random subset of trials.

GoCueInhibition_BilatMC_Behavior: keypoint data for mice performing thetwo-context task while the motor cortex was bilaterally silenced during the response epoch on a random subset of trials.


There are two types of .mat files:



data_structure_animal_sessiondate.mat: MATLAB struct containing electrophysiology and/or keypoint data for a single session.

motionEnergy_animal_sessiondate.mat: MATLAB struct containing motion energy data and assigned movement threshold for a single session (for behavior-only sessions, motion energy is stored in the data_structure file itself).


______________________________________________________________________________________________________________

See the README in the code folder for more info and instructions on how to use the data and the provided code.

Code can also be found at Github.
DOI: 10.15468/dl.e2s72x
title: Occurrence Download

description: A dataset containing 116119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (CR, EN, VU, NT, LC)",
 "License is CC-BY-NC 4.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 116119 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000047-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oamock
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Ecuador",
 "TaxonKey is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 22 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006437-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-51453
title: Redemption tidings, vol. 33, nos. 1-52, 4 Jan. - 25 Dec. 1957

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.4jyqis
title: Occurrence Download

description: A dataset listing the 81 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Carcharodon carcharias (Linnaeus, 1758)"
 ]
}

 The dataset's 81 records were derived from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012269-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cbqe55
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lariscus obscurus (Miller, 1903)"
 ]
}

 The dataset includes 33 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0351694-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9np7eb
title: Occurrence Download

description: A dataset containing 20888 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is one of (Spain, Portugal)",
 "TaxonKey is Bituminaria Heist. ex Fabr."
 ]
}

 The dataset includes 20888 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093815-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ee67x5
title: Occurrence Download

description: A dataset containing 298 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mimon cozumelae Goldman, 1914"
 ]
}

 The dataset includes 298 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0351697-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-51457
title: Redemption tidings, vol. 33, nos. 1-52, 4 Jan. - 25 Dec. 1957

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.r2qhvg
title: Occurrence Download

description: A dataset containing 32544 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acer L.",
 "Year 2020-2020"
 ]
}

 The dataset includes 32544 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064379-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xegwcr
title: Occurrence Download

description: A dataset containing 2343 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Partamona testacea (Klug, 1807)"
 ]
}

 The dataset includes 2343 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093802-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m2nkm4
title: Occurrence Download

description: A dataset containing 552 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maxillopoda",
 "HasCoordinate is true",
 "Country is one of (Netherlands)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 552 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220558-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-51478
title: Redemption tidings, vol. 33, nos. 1-52, 4 Jan. - 25 Dec. 1957

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.c8j4vd
title: Occurrence Download

description: A dataset containing 252 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus lineata Blume"
 ]
}

 The dataset includes 252 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068979-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jmuwgf
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potentilla balansae Pesmen"
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093803-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-51468
title: Redemption tidings, vol. 33, nos. 1-52, 4 Jan. - 25 Dec. 1957

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.5kqypf
title: Occurrence Download

description: A dataset containing 531 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senna italica subsp. arachoides (Burch.) Lock"
 ]
}

 The dataset includes 531 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0383171-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-51993
title: Redemption tidings, vol. 33, nos. 1-52, 4 Jan. - 25 Dec. 1957

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.j2bz0t
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Caracterización del caracol pala Lobatus gigas de la Isla Cayo Serranilla durante la Expedición Seaflower 2017 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 54 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013417-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12801912
title: 16S Amplicon sequence variants (ASVs) data of NEREA Augmented Observatory

description: Metabarcoding - 16S ASV generation and taxonomic assignment. Raw 16S paired-end sequences were subjected to a data quality control step and subsequently imported into the QIIME2 pipeline v.2022.2.0. Leftover primers and adapter sequences were removed through cutadapt. The amplicon sequence variants (ASV) table, which represent true biological sequences within each sample, was generated using the denoised-paired method including truncation, denoising, dereplication, merging, and chimera filtering of the DADA2 (Divisive Amplicon Denoising Algorithm 2) plugin inside QIIME2. Default parameters were used with the exception of the forward and reverse sequence length (--p-trunc-len-f and --p-trunc-len-r), that were set to 220 and 180, respectively. Processed reads that passed all these filters were used for taxonomy classification. The V4-V5 regions were extracted from the pre-formatted reference sequences and taxonomy file built on the SILVA 138 99% OTUs database and the vsearch v.2.6.2 global alignment implemented in QIIME2 was used.
DOI: 10.5281/zenodo.12801913
title: 16S Amplicon sequence variants (ASVs) data of NEREA Augmented Observatory

description: Metabarcoding - 16S ASV generation and taxonomic assignment. Raw 16S paired-end sequences were subjected to a data quality control step and subsequently imported into the QIIME2 pipeline v.2022.2.0. Leftover primers and adapter sequences were removed through cutadapt. The amplicon sequence variants (ASV) table, which represent true biological sequences within each sample, was generated using the denoised-paired method including truncation, denoising, dereplication, merging, and chimera filtering of the DADA2 (Divisive Amplicon Denoising Algorithm 2) plugin inside QIIME2. Default parameters were used with the exception of the forward and reverse sequence length (--p-trunc-len-f and --p-trunc-len-r), that were set to 220 and 180, respectively. Processed reads that passed all these filters were used for taxonomy classification. The V4-V5 regions were extracted from the pre-formatted reference sequences and taxonomy file built on the SILVA 138 99% OTUs database and the vsearch v.2.6.2 global alignment implemented in QIIME2 was used.
DOI: 10.15468/dl.2g7pfw
title: Occurrence Download

description: A dataset containing 1795082159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (South America, North America, Europe, Oceania, Asia, Antarctica, Africa)",
 "Country is one of (Guatemala, Mexico, Norway, Spain, Sweden, Germany, Switzerland, France, Canada, United States of America)"
 ]
}

 The dataset includes 1795082159 records from 35129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033586-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uqrtms
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-131.14723 21.24421,-94.85277 21.24421,-94.85277 35.75579,-131.14723 35.75579,-131.14723 21.24421))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Peromyscus interparietalis Burt, 1932"
 ]
}

 The dataset includes 468 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159165-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hvkfn8
title: Occurrence Download

description: A dataset containing 469 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Motacilla samveasnae J.W.Duckworth, Alstrom, P.Davidson, T.D.Evans, C.M.Poole, T.Setha & R.J.Timmins, 2001)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 469 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0295339-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.95gh2s
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liparis viridipurpurea Griseb."
 ]
}

 The dataset includes 28 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011480-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u9uv3m
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liparis tunensis J.J.Sm."
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011468-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v22mpr
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liparis wightiana Thwaites"
 ]
}

 The dataset includes 9 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011493-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.48pacd
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((11.38798 52.60959,14.93678 52.60959,14.93678 54.50553,11.38798 54.50553,11.38798 52.60959))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aeshna viridis Eversmann, 1836"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0134124-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yc3qye
title: Occurrence Download

description: A dataset containing 953948 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Belgium, Germany, Netherlands)",
 "TaxonKey is one of (Ondatra zibethicus (Linnaeus, 1766), Myocastor coypus (Molina, 1782))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 953948 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0295364-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gz5zn6
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Upogebia barbata (Strahl, 1862)"
 ]
}

 The dataset includes 10 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0134147-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.