cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34965/i10644
title: Manuscript_dataset_of_About_a_method_for_compressing_x-ray_computed_microtomography_data

description: Manuscript dataset of About a method for compressing x-ray computed microtomography data

DOI: 10.1088/1361-6501/aaa0fa
DOI: 10.5258/soton/d2076
title: Data supporting University of Southampton Doctoral Thesis 'Labelling, Modelling, and Predicting Cell Biocompatibility using Deep Neural Networks'

description: Data supporting the Doctoral Thesis: B S Mackay (2021) “Labelling, Modelling, and Predicting Cell Biocompatibility using Deep Neural Networks”, University of Southampton, Optoelectronic Research Centre of the Zepler Institute There are two main sections to the data enclosed here. The first section includes the figures, including graphs, found in the associated thesis. The second section includes the 203 raw images used to train the deep neural network of Chapter 6. Network architecture is a modified version of a typical U-Net, as can be found at https://github.com/affinelayer/pix2pix-tensorflow The raw data used to train the deep neural networks of Chapters 5 and 7 were provided by collaborators, and so are not included in this dataset.
DOI: 10.6073/pasta/678b0008e9906e402bcccde906fbbf25
title: Spatial and Social Behavior of Acanthurus triostegus on Moorea (French Polynesia) and Palmyra Atoll (USA), 2017-2018

description: These data describe the schooling behavior of coral reef fish on Moorea (French Polynesia) and Palmyra Atoll (USA) in 2017 and 2018. Data are grouped into two sets of observations: 1) surveys measuring the abundance of reef fish and the proportion of those fish occurring in schools, and 2) behavioral observations including time spent grazing and GPS tracks of schooling and solitary Acanthurus triostegus.
DOI: 10.5522/04/21756272
title: BehaviouralResults.csv

description: Behavioural results. This the behavioural data of time perception under threat of unpredictable shock. It was generated from the task script in this collection (coded using the cogent toolbox in matlab). For more details see the primary project description and the preregistration document: https://osf.io/54qfh
DOI: 10.5522/04/21756272.v1
title: BehaviouralResults.csv

description: Behavioural results. This the behavioural data of time perception under threat of unpredictable shock. It was generated from the task script in this collection (coded using the cogent toolbox in matlab). For more details see the primary project description and the preregistration document: https://osf.io/54qfh
DOI: 10.6084/m9.figshare.17005681.v3
title: ALIGNN models on JARVIS-DFT dataset

description: ALIGNN models on JARVIS-DFT datasethttps://github.com/usnistgov/alignn<br>
DOI: 10.5281/zenodo.7520459
title: Solid-state NMR data set for SI of "Probing a Hydrogen-π Interaction Involving a Trapped Water Molecule in the Solid State"

description: These datasets are part of the Supplementary Information of "Probing a Hydrogen-π Interaction Involving a Trapped Water Molecule in the Solid State". All experimental details are given in the mentioned document.
DOI: 10.5281/zenodo.7520458
title: Solid-state NMR data set for SI of "Probing a Hydrogen-π Interaction Involving a Trapped Water Molecule in the Solid State"

description: These datasets are part of the Supplementary Information of "Probing a Hydrogen-π Interaction Involving a Trapped Water Molecule in the Solid State". All experimental details are given in the mentioned document.
DOI: 10.6084/m9.figshare.20357538
title: Supplementary Material for: Mesenchymal stromal cell-secretome for therapeutic application in skin wound healing: a systematic review of preclinical studies

description: Non-healing skin wounds remain a challenge in the healthcare system. In this sense, it is suggested that the secretome of mesenchymal stromal cells (MSCs) can be effective as a therapeutic strategy for regenerative medicine. Therefore, this systematic review aimed to determine the effects of treatment with secretome derived from MSCs on the healing of skin wounds in preclinical model of rodents (mice and rats). Studies were systematically retrieved from six databases and grey literature that provided 1172 records, of which 25 met the inclusion criteria for qualitative analysis. Results revealed substantial heterogeneity among studies concerning experimental designs and methodologies, resulting in a high risk of bias. Together, the selected studies reported that treatment improved wound healing by (I) accelerating wound closure and improving skin repair quality; (II) reducing inflammation by decreasing the number of cells and inflammatory cytokines, accompanied by polarization of the M2 macrophage; (III) complete re-epithelialization and epidermal reorganization; (IV) neovascularization promoted by proliferation of endothelial cells (CD34+) and increased levels of pro-angiogenic mediators; (V) better scar quality promoted by increased expression of collagen types I and III, as well as improved deposition and remodeling of collagen fibers. In conclusion, despite the need for alignment of methodological protocols and transparent reports in future studies, results show that the secretome of MSCs from different tissue sources corresponds to a promising tool of regenerative medicine for the treatment of skin wounds.
DOI: 10.6084/m9.figshare.20357538.v1
title: Supplementary Material for: Mesenchymal stromal cell-secretome for therapeutic application in skin wound healing: a systematic review of preclinical studies

description: Non-healing skin wounds remain a challenge in the healthcare system. In this sense, it is suggested that the secretome of mesenchymal stromal cells (MSCs) can be effective as a therapeutic strategy for regenerative medicine. Therefore, this systematic review aimed to determine the effects of treatment with secretome derived from MSCs on the healing of skin wounds in preclinical model of rodents (mice and rats). Studies were systematically retrieved from six databases and grey literature that provided 1172 records, of which 25 met the inclusion criteria for qualitative analysis. Results revealed substantial heterogeneity among studies concerning experimental designs and methodologies, resulting in a high risk of bias. Together, the selected studies reported that treatment improved wound healing by (I) accelerating wound closure and improving skin repair quality; (II) reducing inflammation by decreasing the number of cells and inflammatory cytokines, accompanied by polarization of the M2 macrophage; (III) complete re-epithelialization and epidermal reorganization; (IV) neovascularization promoted by proliferation of endothelial cells (CD34+) and increased levels of pro-angiogenic mediators; (V) better scar quality promoted by increased expression of collagen types I and III, as well as improved deposition and remodeling of collagen fibers. In conclusion, despite the need for alignment of methodological protocols and transparent reports in future studies, results show that the secretome of MSCs from different tissue sources corresponds to a promising tool of regenerative medicine for the treatment of skin wounds.
DOI: 10.5281/zenodo.6402159
title: Maritime routes and vessel tracklet dataset for vessel-to-route association

description: With an ever-increasing number of vessels at sea, the modelling, analysis and visualisation of maritime traffic are of paramount importance to support the monitoring tasks of maritime stakeholders. Sensors have been developed in this respect to track vessels and capture the maritime traffic at the global scale. The Automatic Identification System (AIS) is transmitting maritime positional and nominative information at highest frequency rate, making it a valuable source for maritime traffic modelling. From an original AIS dataset covering the area of Brest, France, we extracted a set of 17 maritime routes, connecting ports in this area. Two different representations for the routes are provided: (1) clusters of AIS contacts, and (2) route prototypes, representing the nominal trajectory of the vessels following the route. Additionally, a set of tracklets (built by five consecutive AIS contacts from the same vessel trajectory) has been extracted from the set of routes and the original dataset, and labelled either with the route name to which they belong or as off-route tracklets. This dataset provides thus some ground truth on the routes followed by vessels and is aimed at testing and validating vessel-to-route or track-to-route association algorithms.
DOI: 10.5281/zenodo.6344385
title: Si data files for Galaxy materials science tutorials

description: This is a training dataset for use in Galaxy materials science tutorials. These files can be used to demonstrate the AIRSS (Ab-Initio Random Structure Searching) method for finding muon stopping sites, using the UEP (Unperturbed Electrostatic Potential) technique for the optimisation stage of that method. The files included are: <strong>Si.cell:</strong> structure file containing atom locations <strong>Si.den_fmt:</strong> electron density data, generated with CASTEP <strong>Si.castep:</strong> CASTEP log file for the electron density calculation <strong>Si-muairss-uep.yaml:</strong> configuration file for the AIRSS / UEP workflow
DOI: 10.5281/zenodo.6344384
title: Si data files for Galaxy materials science tutorials

description: This is a training dataset for use in Galaxy materials science tutorials. These files can be used to demonstrate the AIRSS (Ab-Initio Random Structure Searching) method for finding muon stopping sites, using the UEP (Unperturbed Electrostatic Potential) technique for the optimisation stage of that method. The files included are: <strong>Si.cell:</strong> structure file containing atom locations <strong>Si.den_fmt:</strong> electron density data, generated with CASTEP <strong>Si.castep:</strong> CASTEP log file for the electron density calculation <strong>Si-muairss-uep.yaml:</strong> configuration file for the AIRSS / UEP workflow
DOI: 10.48323/7tw3q-7jn66
title: MS_Lumos_2022_December
DOI: 10.48323/37wsy-g7z07
title: MS_Lumos_2022_December_Yang
DOI: 10.3886/ndt6-1n69
title: Indonesia Compact - Green Prosperity: Participatory Land Use Planning: Final Analysis Report
DOI: 10.6084/m9.figshare.21858726.v1
title: Landslides 1719

description: Landslides mapped for Hokkaido Earthquake Region
DOI: 10.6084/m9.figshare.21858726
title: Landslides 1719

description: Landslides mapped for Hokkaido Earthquake Region
DOI: 10.5255/ukda-sn-856165
title: Making Reading Real: Survey Data, 2022

description: What is the problem I am solving? How would you feel if, while reading this text, letters and words started merging or disappearing, making your reading impossible, and you knew there was nothing you could do to recover your reading ability? Frightening. Devastating. That is precisely the experience of millions of people in the world who have had a stroke or live with neurodegenerative conditions affecting the back of the brain – the area that controls vision. Science cannot repair a damaged brain, but in our research, I found a way to manipulate the text displayed in a reader device to compensate for this brain damage and make reading possible again. During this grant, we aim to convert these manipulation techniques into a commercially viable app to bring reading back to the lives of people with brain injury. For that purpose, we will release an MVP of the app and will collect anonymous user data to better understand the behaviour of the app beyond the clinical setting. The collection contains data collected via the app and online surveys – anonymous data. The app collected data from users (e.g., age, gender, country, type of brain injury). Data does not contain any personal identifiable data from users.
DOI: 10.3886/3dd3-sk66
title: Indonesia Compact - Green Prosperity: Participatory Land Use Planning: Final Data Set
DOI: 10.3886/95ca-wv07
title: Indonesia Compact - Green Prosperity: Participatory Land Use Planning: Final Data Set
DOI: 10.5281/zenodo.7515305
title: Triplet-encoded prebiotic RNA aminoacylation

description: Raw sequencing data and code for data cleaning and analysis associated with the manuscript: Triplet-encoded prebiotic RNA aminoacylation.
DOI: 10.5281/zenodo.7515304
title: Triplet-encoded prebiotic RNA aminoacylation

description: Raw sequencing data and code for data cleaning and analysis associated with the manuscript: Triplet-encoded prebiotic RNA aminoacylation.
DOI: 10.3886/8km6-dm59
title: Indonesia Compact - Procurement Modernization: Final Analysis Report
DOI: 10.3886/ftm6-hr64
title: Indonesia Compact - Procurement Modernization: Final Analysis Report
DOI: 10.17028/rd.lboro.21858663
title: Supplementary information files for Stakeholder acceptance of shared toilets to improve sanitation access in low-income urban settings: a case study of Gulu city, Uganda

description: Supplementary files for article Stakeholder acceptance of shared toilets to improve sanitation access in low-income urban settings: a case study of Gulu city, Uganda <br> With growing worldwide urbanisation, ensuring adequate sanitation for all urban citizens is gaining importance. Access to sufficient and appropriate sanitation presents particular challenges for low-income areas of high population density. In Gulu city, Uganda, 87% of the population relies on shared sanitation facilities. This paper investigates under what circumstances shared toilets can offer access to improved sanitation facilities. It explores stakeholders' perceptions of shared toilets – users, political leaders, and key decision-makers of Gulu. Findings are analysed from an existing dataset of over 10,000 households, alongside qualitative data from household interviews, key informant interviews with health inspectors, health workers, political leaders, and focus group discussions. Results reveal that shared toilets have the potential to improve access to enhanced sanitation technology in areas where people lack the space and financial means to construct individual household toilets. For shared toilets to be acceptable, they would be of a higher sanitation technology, located on private land, with the familiarity of users, and agreed cleaning and maintenance regimes. The paper, therefore, proposes improving both the technology and arrangements for the use of shared facilities, to a level that satisfies users and improves access to safe sanitation in low-income urban areas.
DOI: 10.17028/rd.lboro.21858663.v1
title: Supplementary information files for Stakeholder acceptance of shared toilets to improve sanitation access in low-income urban settings: a case study of Gulu city, Uganda

description: Supplementary files for article Stakeholder acceptance of shared toilets to improve sanitation access in low-income urban settings: a case study of Gulu city, Uganda <br> With growing worldwide urbanisation, ensuring adequate sanitation for all urban citizens is gaining importance. Access to sufficient and appropriate sanitation presents particular challenges for low-income areas of high population density. In Gulu city, Uganda, 87% of the population relies on shared sanitation facilities. This paper investigates under what circumstances shared toilets can offer access to improved sanitation facilities. It explores stakeholders' perceptions of shared toilets – users, political leaders, and key decision-makers of Gulu. Findings are analysed from an existing dataset of over 10,000 households, alongside qualitative data from household interviews, key informant interviews with health inspectors, health workers, political leaders, and focus group discussions. Results reveal that shared toilets have the potential to improve access to enhanced sanitation technology in areas where people lack the space and financial means to construct individual household toilets. For shared toilets to be acceptable, they would be of a higher sanitation technology, located on private land, with the familiarity of users, and agreed cleaning and maintenance regimes. The paper, therefore, proposes improving both the technology and arrangements for the use of shared facilities, to a level that satisfies users and improves access to safe sanitation in low-income urban areas.
DOI: 10.3886/1dhq-4946
title: Indonesia Compact - Procurement Modernization: Interim Analysis Report
DOI: 10.3886/pqev-tc68
title: Indonesia Compact - Procurement Modernization: Interim Analysis Report
DOI: 10.3886/rpsz-jd33
title: Mozambique Compact - Farmer Income Support: Final Analysis Report
DOI: 10.3886/yr9c-1f90
title: Mozambique Compact - Farmer Income Support: Final Analysis Report
DOI: 10.3886/39ts-wm89
title: Mozambique Compact - Farmer Income Support: Design Report
DOI: 10.3886/7t87-rt80
title: Mozambique Compact - Farmer Income Support: Design Report
DOI: 10.3886/hqem-vf97
title: Mozambique Compact - Farmer Income Support: Final Data Set
DOI: 10.3886/ffdz-jz82
title: Mozambique Compact - Farmer Income Support: Final Data Set
DOI: 10.34740/kaggle/dsv/4834348
title: 45+ M Domains with size & Language - Common Crawl
DOI: 10.6084/m9.figshare.21858942
title: Tissue changes induced by cyanoacrylate-based glues used to fix a light polyvinylidene fluoride (PVDF) mesh in a rat model

description: For their quick action and binding strength, cyanoacrylate (CA)-based tissue adhesives can be used instead of sutures to fix meshes used for hernia repair. The current study's objective was to evaluate the tissue alterations induced by CA glues of a different formulation used to fix mesh for hernia repair in a rat models. l. In 40 rats, parietal defects were induced in the abdomen wall, which were then repaired using polyvinylidene fluoride mesh fixed by two different types of CA glue. (Glubran® Tiss 2, GEM s.r.l., Viareggio, Italy and Histoacryl, BBraun Corp., Germany). Macroscopic and histological examinations were carried out to assess mesh fixation , the existence of complications, and tissue responses at one day, seven days, fifteen days, and thirty days after fixation.. Because there were no symptoms of inflammation, displacement, or detachment, the tissue adhesives were effective and had a good biocompatibility. The initial tissue response was minimal and transient in the areas where CA glues were used. Collagen fibrils production around prosthetic components began 7 days after implantation and collagen maturation was achieved 30 days after surgery, ensuring a successful mesh integration. The fixation of the mesh with the Glubran® Tiss 2 glue induced a minor inflammatory reaction and a minor foreign body reaction while inducing a good production of connective tissue necessary for fixing the prosthetic material. In conclusion, our research demonstrated that the two CA adhesives tested caused a successful integration of mesh into host abdominal wall with few complication and a good tolerance as testified by a diminished acute tissue reactivity.
DOI: 10.6084/m9.figshare.21858942.v1
title: Tissue changes induced by cyanoacrylate-based glues used to fix a light polyvinylidene fluoride (PVDF) mesh in a rat model

description: For their quick action and binding strength, cyanoacrylate (CA)-based tissue adhesives can be used instead of sutures to fix meshes used for hernia repair. The current study's objective was to evaluate the tissue alterations induced by CA glues of a different formulation used to fix mesh for hernia repair in a rat models. l. In 40 rats, parietal defects were induced in the abdomen wall, which were then repaired using polyvinylidene fluoride mesh fixed by two different types of CA glue. (Glubran® Tiss 2, GEM s.r.l., Viareggio, Italy and Histoacryl, BBraun Corp., Germany). Macroscopic and histological examinations were carried out to assess mesh fixation , the existence of complications, and tissue responses at one day, seven days, fifteen days, and thirty days after fixation.. Because there were no symptoms of inflammation, displacement, or detachment, the tissue adhesives were effective and had a good biocompatibility. The initial tissue response was minimal and transient in the areas where CA glues were used. Collagen fibrils production around prosthetic components began 7 days after implantation and collagen maturation was achieved 30 days after surgery, ensuring a successful mesh integration. The fixation of the mesh with the Glubran® Tiss 2 glue induced a minor inflammatory reaction and a minor foreign body reaction while inducing a good production of connective tissue necessary for fixing the prosthetic material. In conclusion, our research demonstrated that the two CA adhesives tested caused a successful integration of mesh into host abdominal wall with few complication and a good tolerance as testified by a diminished acute tissue reactivity.
DOI: 10.15128/r13197xm075
title: On Depth Error from Spherical Camera Calibration within Omnidirectional Stereo Vision [dataset]

description: Predominantly image files in PNG format.
description: As a depth sensing approach, whilst stereo vision provides a good compromise between accuracy and cost, a key limitation is the limited field of view of the conventional cameras that are used within most stereo configurations. By contrast, the use of spherical cameras within a stereo configuration offers omnidirectional stereo sensing. However, despite the presence of significant image distortion in spherical camera images, only very limited attempts have been made to study and quantify omnidirectional stereo depth accuracy. In this paper we construct such an omnidirectional stereo system that is capable of real-time 360 degree disparity map reconstruction as the basis for such a study. We first investigate the accuracy of using a standard spherical camera model for calibration combined with a longitude-latitude projection for omnidirectional stereo, and show that the depth error increases significantly as the angle from the camera optical axis approaches the limits of the camera field of view. In contrast, we then consider an alternative calibration approach via the use of perspective undistortion with a conventional pinhole camera model allowing omnidirectional cameras to be mapped to a conventional rectilinear stereo formulation. We find that conversely this proposed approach exhibits improved depth accuracy at large angles from the camera optical axis when compared to omnidirectional stereo depth based on a spherical camera model calibration. [ On Depth Error from Spherical Camera Calibration within Omnidirectional Stereo Vision (M. Groom, T.P. Breckon), In Proc. Int. Conf. on Pattern Recognition, IEEE, 2022. ] Supporting dataset - all stereo camera calibration and depth evaluation images used in this study.
description: Numerical methods in computational and multiple view geometry.
DOI: 10.5517/ccdc.csd.cc287byt
title: CCDC 2092436: Experimental Crystal Structure Determination

description: Related Article: Zhi Hui |2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2br6r2
title: CCDC 2167264: Experimental Crystal Structure Determination

description: Related Article: Peng-Hao Wang, Bin-Wen Liu, Guo-Qiang Wang, Cai Sun|2022|Inorg.Chem.|61|17196|doi:10.1021/acs.inorgchem.2c02760
description: Related Article: penghao wang|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.