cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5488756.v2
title: Figures for "The topography of the environment alters the optimal search strategy for active particles"

description: Figures for "The topography of the environment alters the optimal search strategy for active particles"<br>
DOI: 10.3535/4vn-zrj-923
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cjr-x9w-jfj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19922975.v1
title: Children with congenital heart disease in COVID-19 pandemic times: an integrative review

description: ABSTRACT Objective: to identify the scientific production in health about children with congenital heart disease in COVID-19 pandemic times. Method: this is an integrative review, carried out in June 2020 in the information resources Latin American and Caribbean Literature in Health Sciences (LILACS), National Library of Medicine, National Institutes of Health (PubMed), Scientific Electronic Library Online Journal Portal (SciELO) and Brazilian Institute of Information Science and Technology (Oasis Ibict). Results: 14 studies composed this review. Most studies pointed to tests, interventional procedures and surgery for children with heart disease in pandemic times; others discussed possible complications of COVID-19 among children with congenital heart disease. Conclusion: the incipient production of studies and the weak level of evidence denote an important knowledge gap so far, highlighting the need for studies with strong scientific evidence for the formulation of care guidelines aimed at children with heart disease.
DOI: 10.3535/mak-m12-2zt
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qbj-pqb-zn0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/drt-1nh-3k6
title: †Strophomenidae King, 1846

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f3m-6s4-1wr
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13047890.v1
title: Data figshare.xlsx

description: Patients’ poor performance status is the independent risk factor for urosepsis induced by kidney and ureteral stones
DOI: 10.3535/f8n-y34-bj7
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qzg-1nd-plb
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22224133.v1
title: RCP4.5-SSP2 Model output

description: Model output for a RCP4.5-SSP2 scenario.
DOI: 10.3535/03f-s02-4yy
title: †Leptellinidae Ulrich & Cooper, 1936

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w7n-3h1-w8v
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ksp-5n5-szk
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j60-q9k-l76
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k13-fav-hw9
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/94q-tgp-6q9
title: †Batostoma Ulrich, 1882

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9rg-rxd-kad
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v16-5x8-ysn
title: Platycladus Spach

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19604276.v1
title: Functional mixed effects clustering with application to longitudinal urologic chronic pelvic pain syndrome symptom data

description: By clustering patients with the urologic chronic pelvic pain syndromes (UCPPS) into homogeneous subgroups and associating these subgroups with baseline covariates and other clinical outcomes, we provide opportunities to investigate different potential elements of pathogenesis, which may also guide us in selection of appropriate therapeutic targets. Motivated by the longitudinal urologic symptom data with extensive subject heterogeneity and differential variability of trajectories, we propose a functional clustering procedure where each subgroup is modeled by a functional mixed effects model, and the posterior probability is used to iteratively classify each subject into different subgroups. The classification takes into account both group-average trajectories and between-subject variabilities. We develop an equivalent state-space model for efficient computation. We also propose a cross-validation based Kullback-Leibler information criterion to choose the optimal number of subgroups. The performance of the proposed method is assessed through a simulation study. We apply our methods to longitudinal bi-weekly measures of a primary urological urinary symptoms score from a UCPPS longitudinal cohort study, and identify four subgroups ranging from moderate decline, mild decline, stable and mild increasing. The resulting clusters are also associated with the one-year changes in several clinically important outcomes, and are also related to several clinically relevant baseline predictors, such as sleep disturbance score, physical quality of life and painful urgency.
DOI: 10.3535/6et-kd7-gjv
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/eqa-wd0-z4d
title: †Diplotrypa Nicholson, 1879

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lb3-nbr-t9b
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/4p7kc4s5fk
title: Data for: Development of a simple new flow cytometric antibody-dependent cellular cytotoxicity (ADCC) assay with excellent sensitivity
DOI: 10.3535/739-qyv-deb
title: Kukersite oil shale

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y05-qfb-7kk
title: †Eridotrypa Ulrich, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26340253.v1
title: Source Data.zip

description: This is the Source Data for the paper “Lapsed El Nino impact on Atlantic and Northwest Pacific tropical cyclone activity in 2023”
DOI: 10.3535/vms-g0g-hdn
title: †Hallopora Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x4q-x7l-00g
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.96222.v1
title: Yeast Adaptation Day 6

description: Yeast growth in 99% D2O and 50% D2O. The experiment started with a DDW sample as well, but the sample was destroyed prior to measurement at hour 3.
DOI: 10.3535/194-tgw-sns
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lvq-vh8-0zc
title: Posidonia K.D.Koenig

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3829800.v1
title: Parking lot Car Data

description: Variables:Colour: The paint colour of the car.Company: The company that produced the car.
DOI: 10.3535/2gv-pyv-s58
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7941506.v1
title: Pharmacovigilance of patients with multiple myeloma being treated with bortezomib and/or thalidomide

description: In order to evaluate the main adverse effects of drug protocols using bortezomib and/or thalidomide for the treatment of multiple myeloma, we conducted a prospective study. Data were collected through interviews, clinical observation, and from hospital records. A total of 59 patients were included. There was a predominance of females, 36 (61%) vs 23 (39%) males, and of whites, 49 (83.1%) vs 10 (16.9%) blacks. Age ranged from 40 to 94 years, with a median of 65 years (SD=11.6). Regarding staging at diagnosis, 27 (45.7%) patients were in stage III-A, with 12 (20.3%) patients having serum creatinine ≥2 mg/dL. The main adverse effects in the bortezomib treatment group (n=40) were: neutropenia (42.5%), diarrhea (47.5%), and peripheral neuropathy in 60% of cases, with no difference between the iv (n=26) and sc (n=14) administration routes (P=0.343). In the group treated with thalidomide (n=19), 31.6% had neutropenia, 47.4% constipation, and 68.4% peripheral neuropathy. Neutropenia was associated with the use of alkylating agents (P=0.038). Of the 3 patients who received bortezomib in combination with thalidomide, only 1 presented peripheral neuropathy (33.3%). Peripheral neuropathy was the main adverse effect of the protocols that used bortezomib or thalidomide, with a higher risk of neutropenia in those using alkylating agents. Improving the identification of adverse effects is critical in multiple myeloma patient care, as the patient shows improvements during treatment, and requires a rational and safe use of medicines.
DOI: 10.3535/2a7-nez-cj2
title: Posidonia K.D.Koenig

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v58-wbf-0qh
title: †Diplotrypa Nicholson, 1879

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1j7-pdm-32f
title: †Dianulites Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d9y-bbw-mty
title: †Esthoniopora Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/4m8p7k54t4
title: Data for: Geomorphic Response of Inlet Barrier Islands to Storms

description: Bird Shoal 11/23/2016 "Recovery"
DOI: 10.3535/gye-gbc-k5z
title: †Mesotrypa Ulrich, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lfd-hnk-stl
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/3dg4vn85rv
title: Data of the manuscript Aversive control of Betta splendens behavior using water disturbances: Effects of signaled and unsignaled free-operant avoidance and escape contingencies

description: Research on aversive control of behavior using animal models typically employs electric-shock based procedures with avian and mammalian species. There is a need for testing shock-based facts about aversive control using other forms of stimulation and other species. Here you find available the data supporting the study in which we developed a preparation for studying free-operant avoidance with Betta splendens in which water flows (WFs) replaced electric shocks (Hurtado-Parrado, Acevedo-Triana, & Pear, 2019 - https://doi.org/10.1016/j.beproc.2018.10.021). Fish changed compartments in a shuttle tank to escape or avoid 10-s WFs, which were delivered with 30-s flow-flow (F-F) and response-flow (R-F) intervals. We tested the effect of adding a warning stimulus (curtains of air bubbles) to the last 5 s of the response-flow interval (i.e., signaled avoidance) on the bettas’ behavioral patterns. Crossings during the WFs were categorized as escape (Esc) and initiated a R-F interval. Crossings that occurred during R-F or F-F intervals were classified as avoidance, and likewise initiated an R-F interval. Avoidance crossings were further differentiated into early avoidance (EA) if crossing occurred during the first 25 s of the R-F interval; late avoidance (LA) if crossing occurred during the last 5 s of the R-F interval; and Flow-Flow avoidance (FF) if crossing occurred anytime during the F-F interval. Here we present the data of six bettas across the different phases of the study; namely, baseline (BL - no WFs programmed), signaled avoidance (SA - the warning stimulus was scheduled), and unsignaled avoidance (UA - no warning stimulus presented). The dataset available here includes for each fish and per daily session the total number of crossings; frequency of each type of crossing (Esc, EA, LA, FF); total WF frequency and duration, and the total time spent in each compartment. Escape was the predominant response across all fish, which importantly reduced their exposure to the WFs. Avoidance responses rarely exceeded the frequency of escape.
DOI: 10.3535/lq4-jc5-56k
title: Chondrites isp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s3f-j9c-ad7
title: Planolites montanus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/53j-rrt-2lt
title: †Dianulites Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wkv-mr0-1xq
title: Posidonia K.D.Koenig

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jmy-514-6p2
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l4s-gcv-lnx
title: †Mesotrypa excentrica Modzalevskaya, 1953

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28012063.v2
title: Spatiotemporal Interactive Modeling of Event-Based Dynamic Networks

description: Event-based dynamic networks exist in a wide range of areas, including traffic, biological, and social applications. Such a network consists of interaction event sequences over different locations, where each event may trigger or influence a series of subsequent events under certain intrinsic spatial structure because of their geographical and semantic proximities. Such influence patterns and triggering motivations reflect the nature and semantics of human/object behaviors in the network. Thus, modeling event-based dynamic networks properly is critically important. This article proposes a spatiotemporal interactive Hawkes process (SIHP) that describes how a series of events occurs and models the rate of interaction events between any pair of nodes on the network explicitly with the information from related historical events as well as geographical and semantic neighboring nodes. The proposed SIHP can not only learn the patterns of influence from historical interaction events on later ones, but can also understand the network dynamics by fully considering spatial structure knowledge. Specifically, we incorporate prior knowledge of spatial structure as a graph and design graph regularization in the SIHP, where model parameters are estimated by designing an alternating direction method of multiplier (ADMM) framework. Numerical experiments and a real case study on New York yellow taxi data validate the effectiveness of the proposed method.
DOI: 10.3535/c6j-ens-phv
title: †Orthidae Woodward, 1852

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m87-3mb-dr5
title: Palaeophycus tubularis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xng-em3-914
title: Palaeophycus tubularis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28585298.v1
title: README

description: DNA sequence alignments and outputs from phylogenetic and population genomic analyses.
DOI: 10.3535/05q-64e-3qn
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2nq-avc-733
title: Posidonia K.D.Koenig

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1470172.v5
title: SUMOylation of the C-terminal domain of DNA topoisomerase IIα regulates the centromeric localization of Claspin

description: DNA topoisomerase II (TopoII) regulates DNA topology by its strand passaging reaction, which is required for genome maintenance by resolving tangled genomic DNA. In addition, TopoII contributes to the structural integrity of mitotic chromosomes and to the activation of cell cycle checkpoints in mitosis. Post-translational modification of TopoII is one of the key mechanisms by which its broad functions are regulated during mitosis. SUMOylation of TopoII is conserved in eukaryotes and plays a critical role in chromosome segregation. Using <i>Xenopus laevis</i> egg extract, we demonstrated previously that TopoIIα is modified by SUMO on mitotic chromosomes and that its activity is modulated via SUMOylation of its lysine at 660. However, both biochemical and genetic analyses indicated that TopoII has multiple SUMOylation sites in addition to Lys660, and the functions of the other SUMOylation sites were not clearly determined. In this study, we identified the SUMOylation sites on the C-terminal domain (CTD) of TopoIIα. CTD SUMOylation did not affect TopoIIα activity, indicating that its function is distinct from that of Lys660 SUMOylation. We found that CTD SUMOylation promotes protein binding and that Claspin, a well-established cell cycle checkpoint mediator, is one of the SUMOylation-dependent binding proteins. Claspin harbors 2 SUMO-interacting motifs (SIMs), and its robust association to mitotic chromosomes requires both the SIMs and TopoIIα-CTD SUMOylation. Claspin localizes to the mitotic centromeres depending on mitotic SUMOylation, suggesting that TopoIIα-CTD SUMOylation regulates the centromeric localization of Claspin. Our findings provide a novel mechanistic insight regarding how TopoIIα-CTD SUMOylation contributes to mitotic centromere activity.
DOI: 10.6084/m9.figshare.27175851.v2
title: Above ground biomass

description: Above ground biomass from 2015 to 2016
DOI: 10.17632/5wksxskj53
title: First-line Therapy Response in Patients with Pyoderma Gangrenosum: A Retrospective Cohort Study

description: These supplementary tables and figure pertain to a research letter titled "First-line Therapy Response in Patients with Pyoderma Gangrenosum: A Retrospective Cohort Study" and describe a full list of data collected on study, definitions of terms used, and subject selection methods.
DOI: 10.3535/0z9-0es-1xg
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mps-snj-cdy
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a5p-lt9-czb
title: Serpula Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qqg-m39-zqr
title: †Chasmatopora d'Orbigny, 1849

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zm0-zbb-ldx
title: Palaeophycus tubularis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8y8-lnx-3ye
title: †Mesotrypa excentrica Modzalevskaya, 1953

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m9m-7ze-mjg
title: Palaeophycus tubularis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.18823172.v2
title: Data files and related resources for word type and contrast display

description: Data files and related resources for word type and contrast display
DOI: 10.6084/m9.figshare.4630210.v1
title: scripts N-O-P-Q

description: Movie scripts starting with N-O-P-Q
DOI: 10.25403/upresearchdata.21975503.v1
title: Egg production weights trial

description: Dataset containing the results of trial conducted in an effort to determine the effects of long-term inclusion of the trace minerals: zinc, copper, and manganese in the feed on the egg production, egg shell quality, and internal egg quality of Lohmann lite laying hens<em>.</em> This trial compared minerals sourced from chelated hydroxy-analogues of methionine, with conventional sulphide and oxide salt sources of the same minerals. The production parameters that were measured during the trial included egg production, total feed intake, feed conversion ratio, and hen mortality. Egg shell quality was quantified by recording the total amount of eggs rejected per category, egg shell weight, egg weight, and the egg shell breaking strength. Internal egg quality was quantified by measuring the albumin height (Haugh unit), and the mineral concentration in the egg yolk of Zn, Cu and Mn. A total of 1080 Lohmann Brown Lite laying hens were allocated to six treatments. The trial was run for 60 weeks, was initiated at 16 weeks-of-age, and was terminated at 76 weeks-of-age. Each treatment was repeated eighteen times, and a complete randomised block design was used.
DOI: 10.3535/67e-p8h-v8t
title: Planolites montanus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yzd-51n-yqv
title: †Mesotrypa Ulrich, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/753-xeb-xea
title: Palaeophycus tubularis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ajz-132-zww
title: Arthropoda

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ylx-jf8-047
title: Arthropoda

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3686725_d3.v1
title: Additional file 3: of Genome scaffolding and annotation for the pathogen vector Ixodes ricinus by ultra-long single molecule sequencing

description: Dataset S2. Number of I. ricinus annotations by protein categories. The frequency of assigned annotations was counted. For each annotation, the number of sequences is given. (XLS 354Â kb)
DOI: 10.3535/581-g4j-dvw
title: Arthropoda

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/931-8xg-01z
title: Arthropoda

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rsm-nky-nne
title: Arthropoda

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xzg-1pa-97x
title: Arthropoda

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16786558.v3
title: R Code for analysis - The effect of resource availability on interspecific competition between a native and an invasive ant

description: R Code for "The effect of resource availability on interspecific<br>competition between a native and an invasive ant"