cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.bq0rm
title: Data from: Association of high-sensitivity cardiac troponin T with mortality and cardiovascular events in a community-based prospective study in Beijing

description: Objective: The prognostic value of cardiac troponins in apparently healthy
 populations is not well established. The aim of this study was to
 investigate the prognostic properties of high-sensitivity cardiac troponin
 T (hs-cTnT) for long-term adverse outcomes. Setting: A community-dwelling
 prospective survey of residents from two communities in Beijing.
 Participants: From September 2007 to January 2009, 1680 participants were
 initially enrolled. Of these, 1499 (870 females, mean age: 61.4 years)
 participants completed the survey and were followed up for a median of 4.8
 years (interquartile range: 4.5–5.2). Outcome measures: The primary
 outcome was the occurrence of all-cause mortality and major cardiovascular
 events. Results: Overall, 820 individuals (54.7%) had detectable hs-cTnT
 levels. During the follow-up, 52 participants (3.5%) died, 154 (10.3%) had
 major cardiovascular events, and 99 (6.6%) experienced new-onset coronary
 events. Compared with those with undetectable hs-cTnT levels, participants
 with hs-cTnT levels in the highest category(≥14 ng/L) had a significantly
 increased risk for all-cause mortality (adjusted hazard ratio [aHR] :
 2.07, 95% confidence interval [CI]: 1.05–3.01), major cardiovascular
 events (aHR: 3.27, 95% CI: 1.88–5.70), and coronary events (aHR: 4.50, 95%
 CI: 2.26–9.02) in covariate-adjusted analyses. No differences in stroke
 incidence were found (aHR: 1.27; 95% CI: 0.69–2.62). Also, significant
 associations were presented when hs-cTnT levels were modelled as a
 continuous variable and when analysing changes in hs-cTnT levels over time
 with adverse outcomes. The addition of troponin T levels to clinical
 variables led to significant increases in risk prediction with a marked
 improvement in the c-statistic (P=0.003 or lower). Conclusions: In this
 cohort of individuals from a community-based population, cardiac troponin
 T levels measured with a highly sensitive assay were associated with
 increases in the subsequent risk for all-cause mortality and major
 cardiovascular events. These results might support screening for at-risk
 individuals.
description: Database of the
 studyData
 sheet .xls
DOI: 10.1594/pangaea.972603
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ARK-XX/3 (PS66), Fram Strait, Arctic Ocean

description: Multibeam data were collected during RV Polarstern cruise ARK-XX/3 (2004-08-31 to 2004-10-03). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
DOI: 10.1594/pangaea.972605
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXIX/5 (PS81), Falkland Plateau, South Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXIX/5 (2013-04-18 to 2013-05-29). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from SVPs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
DOI: 10.1594/pangaea.917946
title: Oceanographic profile of CTD cast K180528_TowYo_001_Cast_010
DOI: 10.1594/pangaea.965142
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS139/1, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS139/1 (2023-10-22 to 2023-11-03). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.949075
title: Alkenone unsaturation index, remote sensing seasona, annual SST and chlorophyll-a data from the continental shelf of the South Brazilian Bight

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.5061/dryad.m5c7m
title: Data from: Fungal endophytes of Vanilla planifolia across Réunion Island: isolation, distribution and biotransformation.

description: Background The objective of the work was to characterize fungal endophytes
 from aerial parts of Vanilla planifolia. Also, to establish their
 biotransformation abilities of flavor-related metabolites. This was done
 in order to find a potential role of endophytes on vanilla flavors.
 Results Twenty three MOTUs were obtained, representing 6 fungal classes.
 Fungi from green pods were cultured on mature green pod based media for 30
 days followed by 1H NMR and HPLC-DAD analysis. All fungi from pods
 consumed metabolized vanilla flavor phenolics. Though Fusarium
 proliferatum was recovered more often (37.6 % of the isolates), it is
 Pestalotiopsis microspora (3.0 %) that increased the absolute amounts
 (quantified by 1H NMR in μmol/g DW green pods) of vanillin (37.0 × 10−3),
 vanillyl alcohol (100.0 × 10−3), vanillic acid (9.2 × 10−3) and
 p-hydroxybenzoic acid (87.9 × 10−3) by significant amounts. Conclusions
 All plants studied contained endophytic fungi and the isolation of the
 endophytes was conducted from plant organs at nine sites in Réunion Island
 including under shade house and undergrowth conditions. Endophytic
 variation occured between cultivation practices and the type of organ.
 Given the physical proximity of fungi inside pods, endophytic
 biotransformation may contribute to the complexity of vanilla flavors.
description: Phylogenetic Tree
 Original Data Set (Opens with MEGA 5.0 + MS Powerpoint)All files were
 generated, and can be opened, on MEGA 5.0 (http://www.megasoftware.net/) +
 MS Powerpoint. Phylogenetic relationships among the 23 identified MOTUs
 from fungal endophytes isolated from Vanilla planifolia. The analysis was
 based on LSU rDNA sequences.Phylogenetic_Tree_Data.zip
DOI: 10.1594/pangaea.949063
title: Extracted water column temperatures data from the World Ocean Atlas (WOA13) from the continental shelf of the South Brazilian Bight

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.965146
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS139/2, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS139/2 (2023-11-03 to 2023-11-22). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.917956
title: Oceanographic profile of CTD cast K180528_TowYo_001_Cast_019
DOI: 10.1594/pangaea.955075
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS98, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS98 (2016-04-10 to 2016-05-11). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from World Ocean Atlas 13 (https://doi.org/10.7289/v5f769gt), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.973026
title: Multibeam bathymetry processed data (Kongsberg EM 122 entire dataset) of RV SONNE during cruise SO261, Atacama Trench, South Pacific Ocean

description: Multibeam data were collected during RV Sonne cruise SO261 (2018-03-03 to 2018-04-02). Multibeam sonar system was Kongsberg EM 122 multibeam echosounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.973125
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS95/1, North Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS95.N1 (2015-10-29 to 2015-11-08). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.5061/dryad.j6p0b
title: Data from: Herbivore size matters for productivity-richness relationships in African savannas

description: 1.Productivity and herbivory often interact to shape plant community
 composition and species richness with levels of production mediating the
 impact of herbivory. Yet, differences in herbivore traits such as size,
 feeding guild, and dietary requirements may result in different impacts of
 diverse herbivore guilds across productivity gradients. 2.We used
 size-selective herbivore exclosures to separate the effects of herbivory
 by larger herbivores, such as elephant, Burchell's zebra, and blue
 wildebeest from those of medium/smaller herbivores, such as impala and
 warthog, on herbaceous plant communities. These exclosures were
 established along a 10-fold productivity gradient, ranging from 90-950 g
 m−2 of standing plant biomass in the Kruger National Park, South Africa.
 3.Exclusion of all herbivores generally increased plant species richness
 at low productivity but decreased richness at high productivity. Exclusion
 of medium/smaller herbivores (e.g. impala, warthog) showed stronger
 effects on plant richness, particularly loss of forbs, at higher
 productivity rather than at lower productivity. In contrast, exclusion of
 larger herbivores had stronger effects on plant richness, typically with
 increasing forb richness, at low rather than high productivity. 4.The
 change in species richness appeared linked to changes in light
 availability following herbivore exclusion. Strong increases in shading
 led to declines in species richness while more moderate increases in
 shading led in increases in species richness, possibly due to amelioration
 of heat and water stress by modest increases in shading. 5.Increasing
 plant dominance, which likely alters multiple mechanisms of plant
 interactions, was correlated with declines in plant richness following
 herbivore exclusion. The impact of increasing dominance on plant richness
 operated independent of productivity, with the exclusion of impala
 appearing particularly important in driving this relationship.
 6.Synthesis. We show that the impact of herbivore losses on plant
 diversity will be strongly situation dependent and will vary with the
 herbivores lost (e.g. larger vs. smaller, grazers vs. browsers), plant
 functional type (e.g. grasses vs. forbs), and environmental context (e.g.
 productivity). Although larger herbivores are often emphasized for their
 strong impacts on community dynamics and ecosystem processes, we show that
 smaller, abundant herbivores can exert strong top-down control on plant
 communities.
description: Productivity_Spp_Comp_Burkepile_et_al_JoEThis file contains data for plant species composition, productivity, and light availability from a herbivore exclusion experiment conducted across a productivity gradient in Kruger National Park, South AfricaProductivity_Spp_Comp_2013_Dryad.xlsx
DOI: 10.1594/pangaea.973028
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS85, Fram Strait, Arctic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS85 (2014-06-06 to 2014-07-03). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.955080
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS113, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS113 (2018-05-08 to 2018-06-11). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 13 (https://doi.org/10.7289/v5f769gt), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.955081
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS115/1, Northeast Greenland, Arctic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS115/1 (2018-08-05 to 2018-09-03). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from SVPs and World Ocean Atlas 13 (https://doi.org/10.7289/v5f769gt), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.954691
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS120, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS120 (2019-06-02 to 2019-06-29). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs, XBTs and World Ocean Atlas 09 (https://accession.nodc.noaa.gov/0094866), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.955078
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS105, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS105 (2017-03-21 to 2017-04-20). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from World Ocean Atlas 13 (https://doi.org/10.7289/v5f769gt), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.5061/dryad.k1t5ph0
title: Data from: Facilitation beyond species richness

description: 1. Facilitation studies have previously focused on the effects of
 plant-plant interactions on species richness and, more recently, on
 functional traits or phylogenetic aspects. Little is known, however, about
 the simultaneous effects that facilitation have on overall biodiversity,
 jointly considering taxonomic, functional and phylogenetic diversity. 2.
 In this study, we investigated shrub facilitation on herb communities in a
 Mediterranean grassland over a 9-year period (2007-2015), each year
 representing different water availability conditions. Taxonomic,
 functional and phylogenetic diversity indices were estimated using
 generalized Hill numbers within the integrated framework of attribute
 diversity. We used generalized linear mixed models to analyse the effect
 of shrub cover on the different diversity indices along a water
 availability gradient. 3. Shrub cover had a positive effect on all
 attribute diversity indices, yet greater for abundant species. Shrubs also
 favoured survival of certain species (26.5% of total species), but above
 all they affected relative abundances of common species, filtering growth
 of dominant species (e.g. Poa bulbosa) and promoting evenness. Diversity
 indices accounting for abundant (i.e. high coverage) species showed
 stronger facilitation effects under mid-range water availability
 conditions. 4. These results suggest a preeminent role of shrubs in the
 maintenance of all three dimensions of diversity in Mediterranean
 grasslands, promoting more even communities, and to a lower extent, also
 species richness. Facilitation effects on taxonomic, functional and
 phylogenetic diversity also increased at mid-range values of water
 availability, in accordance with the humped-back model. Our study
 illustrates the need to evaluate different biodiversity dimensions from an
 integrated perspective, such as attribute diversity, to disentangle the
 role of facilitation in community assembly.
description: Abundance
 matrixPlant cover (%) data of
 147 herbaceous species collected in a Mediterranean grassland (Salamanca,
 Spain) during the period 2007-2015. Samples are coded indicating their
 position (SH= beneath shrub canopy; OF= open field area), pair number
 (1-270) and the year of sampling (2007-2015).abundances.csvFunctional traitsFunctional traits collected from public databases of the 147 species surveyed in this study. Description of the traits with measurement units, variable types, categories, and references used for data compilation can be found in supplementary material (Table S1) of the original paper.traits.csvPhylogenetic treeNewick format phylogenetic tree of the 147 focal species pruned from the megaphylogeny of Zanne et al. 2014. The species not included in the megaphylogeny, were added (Qian & Jin, 2016), and corrected based on specific published phylogenies. Bibliographic references are shown in supplementary material (Table S2) of the original paper.tree.txt
DOI: 10.1594/pangaea.954624
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 3 echo sounder entire dataset) of RV POLARSTERN during cruise PS123, Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise PS123 (2020-12-20 to 2021-02-01). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 3 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from SVPs, UCTDs and World Ocean Atlas 13 (https://doi.org/10.7289/v5f769gt), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.