cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.gentb5
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cynomorium coccineum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 169 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021343-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wpfjfr
title: Occurrence Download

description: A dataset containing 45028 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Carcina quercana"
 ]
}

 The dataset includes 45028 records from 286 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021342-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18654242
title: Stablecoin DeFi Hourly Dataset (weekly snapshot) - 2026-02-16

description: Weekly snapshot uploaded automatically from the GitHub rolling release `data-latest`.

Source release: https://github.com/MSCA-DN-Digital-Finance/stablecoin-onchain-data/releases/tag/data-latest
Release created at: 2026-01-20T12:09:16Z

Files included: AAVE, Uniswap, Curve, ETH blocks mapping (ZIP archives).
DOI: 10.15468/dl.xnedq5
title: Occurrence Download

description: A dataset containing 553 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Coordinate reprojected)",
 "TaxonKey is Abies hickelii"
 ]
}

 The dataset includes 553 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021344-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nd7grm
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Daphniphyllum dichotomum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021345-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fae6dt
title: Occurrence Download

description: A dataset containing 177 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Coordinate reprojected)",
 "TaxonKey is Senecio grandifolius"
 ]
}

 The dataset includes 177 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021346-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y8fevg
title: Occurrence Download

description: A dataset containing 2339 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Daphniphyllum macropodum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 2339 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021349-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k3yzj3
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is Coordinate rounded",
 "TaxonKey is Rubus adenotrichus"
 ]
}

 The dataset includes 14 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021350-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31306645
title: A High-Quality Genome Assembly of Fusarium ipomoeae strain F-1

description: <i>Fusarium ipomoeae</i> is an emerging soilborne fungal pathogen that infects roots and basal tissues of diverse crop species worldwide, leading to significant agricultural losses. To elucidate the genomic basis of<i> F. ipomoeae</i>, strain F-1was isolated and subjected to whole-genome analysis. A high-quality reference genome was assembled using Oxford Nanopore long-read sequencing and polished with DNBSEQ short-read data.This genome resource provides a foundation for investigating the pathogenic mechanisms, host adaptation, and evolutionary history of<i> F. ipomoeae</i>, with implications for disease control in the future.
DOI: 10.6084/m9.figshare.31306645.v2
title: A High-Quality Genome Assembly of Fusarium ipomoeae strain F-1

description: <i>Fusarium ipomoeae</i> is an emerging soilborne fungal pathogen that infects roots and basal tissues of diverse crop species worldwide, leading to significant agricultural losses. To elucidate the genomic basis of<i> F. ipomoeae</i>, strain F-1was isolated and subjected to whole-genome analysis. A high-quality reference genome was assembled using Oxford Nanopore long-read sequencing and polished with DNBSEQ short-read data.This genome resource provides a foundation for investigating the pathogenic mechanisms, host adaptation, and evolutionary history of<i> F. ipomoeae</i>, with implications for disease control in the future.
DOI: 10.6084/m9.figshare.31306645.v1
title: A Near-Complete, High-Quality Genome Assembly of <i>Fusarium ipomoeae</i> strain F-1

description: <i>Fusarium ipomoeae</i> is an emerging soilborne fungal pathogen that infects roots and basal tissues of diverse crop species worldwide, leading to significant agricultural losses. To elucidate the genomic basis of<i> F. ipomoeae</i>, strain F-1was isolated and subjected to whole-genome analysis. A high-quality reference genome was assembled using Oxford Nanopore long-read sequencing and polished with DNBSEQ short-read data.This genome resource provides a foundation for investigating the pathogenic mechanisms, host adaptation, and evolutionary history of<i> F. ipomoeae</i>, with implications for disease control in the future.
DOI: 10.15468/dl.mfst3b
title: Occurrence Download

description: A dataset containing 3894 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ribes rubrum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 3894 records from 205 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021352-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3a3s3n
title: Occurrence Download

description: A dataset containing 564 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Coordinate reprojected)",
 "TaxonKey is Nolina parviflora"
 ]
}

 The dataset includes 564 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021353-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31199993
title: Kitasamycin overcomes ferroptosis and immunotherapy resistance by targeting the HUWE1-NCOA4-FTH1 axis

description: Clinicians typically avoid antibiotics use during immunotherapy due to concerns about reduced efficacy. However, cancer patients requiring antibiotics postoperatively or for infections urgently need options that provide antimicrobial coverage while potentially enhancing, rather than impairing, immunotherapy. Restoring ferroptosis susceptibility represents a promising strategy to overcome immunotherapy resistance, yet the role of antibiotics in modulating ferroptosis and interacting with immunotherapy remains unexplored. In this study, we screened 96 FDA-approved antibiotics across seven pharmacological classes and identified the macrolide kitasamycin as a specific and potent ferroptosis sensitizer in vitro and in vivo. Mechanistically, kitasamycin competitively bound to HUWE1, inhibiting its E3 ubiquitin ligase activity, which stabilized NCOA4 and activated the NCOA4-FTH1 ferritinophagy axis. Single-cell transcriptomics, flow cytometry, and multiplex immunohistochemistry revealed that kitasamycin induced immunogenic ferroptosis and reshaped anti-tumor T-cell immunity. Critically, kitasamycin potentiated immune checkpoint blockade (ICB)-mediated ferroptosis and overcame ICB resistance across multiple preclinical melanoma models, including B16F10 subcutaneous tumors, BRAF-PTEN-driven spontaneous tumors, and human sourced peripheral blood mononuclear cells (HsPBMCs)-humanized mouse models. Clinically, a high NCOA4, low HUWE1 signature correlated with ferroptosis activation, increased T-cell infiltration, and improved survival in ICB-treated patients, suggesting its potential as a predictive biomarker. Our findings positioned kitasamycin as a promising adjunct to immunotherapy for cancer patients requiring concurrent antibiotic therapy. <b>Abbreviations</b>: FTH1: ferritin heavy chain 1; ICB: immune checkpoint blockade; IFNG: interferon gamma; mIHC: multiplex immunohistochemistry; scRNA-seq: single-cell RNA sequencing.
DOI: 10.6084/m9.figshare.31199993.v1
title: Kitasamycin overcomes ferroptosis and immunotherapy resistance by targeting the HUWE1-NCOA4-FTH1 Axis

description: Clinicians typically avoid antibiotics use during immunotherapy due to concerns about reduced efficacy. However, cancer patients requiring antibiotics postoperatively or for infections urgently need options that provide antimicrobial coverage while potentially enhancing, rather than impairing, immunotherapy. Restoring ferroptosis susceptibility represents a promising strategy to overcome immunotherapy resistance, yet the role of antibiotics in modulating ferroptosis and interacting with immunotherapy remains unexplored. In this study, we screened 96 FDA-approved antibiotics across seven pharmacological classes and identified the macrolide kitasamycin as a specific and potent ferroptosis sensitizer in vitro and in vivo. Mechanistically, kitasamycin competitively bound to HUWE1, inhibiting its E3 ubiquitin ligase activity, which stabilized NCOA4 and activated the NCOA4-FTH1 ferritinophagy axis. Single-cell transcriptomics, flow cytometry, and multiplex immunohistochemistry revealed that kitasamycin induced immunogenic ferroptosis and reshaped anti-tumor T-cell immunity. Critically, kitasamycin potentiated immune checkpoint blockade (ICB)-mediated ferroptosis and overcame ICB resistance across multiple preclinical melanoma models, including B16F10 subcutaneous tumors, BRAF-PTEN-driven spontaneous tumors, and human sourced peripheral blood mononuclear cells (HsPBMCs)-humanized mouse models. Clinically, a high NCOA4, low HUWE1 signature correlated with ferroptosis activation, increased T-cell infiltration, and improved survival in ICB-treated patients, suggesting its potential as a predictive biomarker. Our findings positioned kitasamycin as a promising adjunct to immunotherapy for cancer patients requiring concurrent antibiotic therapy. <b>Abbreviations</b>: FTH1: ferritin heavy chain 1; ICB: immune checkpoint blockade; IFNG: interferon gamma; mIHC: multiplex immunohistochemistry; scRNA-seq: single-cell RNA sequencing.
DOI: 10.6084/m9.figshare.31199993.v2
title: Kitasamycin overcomes ferroptosis and immunotherapy resistance by targeting the HUWE1-NCOA4-FTH1 axis

description: Clinicians typically avoid antibiotics use during immunotherapy due to concerns about reduced efficacy. However, cancer patients requiring antibiotics postoperatively or for infections urgently need options that provide antimicrobial coverage while potentially enhancing, rather than impairing, immunotherapy. Restoring ferroptosis susceptibility represents a promising strategy to overcome immunotherapy resistance, yet the role of antibiotics in modulating ferroptosis and interacting with immunotherapy remains unexplored. In this study, we screened 96 FDA-approved antibiotics across seven pharmacological classes and identified the macrolide kitasamycin as a specific and potent ferroptosis sensitizer in vitro and in vivo. Mechanistically, kitasamycin competitively bound to HUWE1, inhibiting its E3 ubiquitin ligase activity, which stabilized NCOA4 and activated the NCOA4-FTH1 ferritinophagy axis. Single-cell transcriptomics, flow cytometry, and multiplex immunohistochemistry revealed that kitasamycin induced immunogenic ferroptosis and reshaped anti-tumor T-cell immunity. Critically, kitasamycin potentiated immune checkpoint blockade (ICB)-mediated ferroptosis and overcame ICB resistance across multiple preclinical melanoma models, including B16F10 subcutaneous tumors, BRAF-PTEN-driven spontaneous tumors, and human sourced peripheral blood mononuclear cells (HsPBMCs)-humanized mouse models. Clinically, a high NCOA4, low HUWE1 signature correlated with ferroptosis activation, increased T-cell infiltration, and improved survival in ICB-treated patients, suggesting its potential as a predictive biomarker. Our findings positioned kitasamycin as a promising adjunct to immunotherapy for cancer patients requiring concurrent antibiotic therapy. <b>Abbreviations</b>: FTH1: ferritin heavy chain 1; ICB: immune checkpoint blockade; IFNG: interferon gamma; mIHC: multiplex immunohistochemistry; scRNA-seq: single-cell RNA sequencing.
DOI: 10.6084/m9.figshare.31344159
title: Toward an explainable AI-Based clinical decision support system for predicting adverse outcomes in Rhabdomyolysis

description: Rhabdomyolysis is a severe condition with high morbidity and mortality, driven by complications like acute kidney injury. Early risk stratification remains challenging as traditional scores fail to capture complex data patterns. This study lays the foundation for an explainable AI (XAI)-based clinical decision support system (CDSS) by developing a machine learning model to predict the composite outcome of renal replacement therapy or 90-day mortality. Using routinely available admission data from 1031 adults, we applied multivariate imputation, Boruta feature selection, and ADASYN for class imbalance. The CatBoost model achieved the highest discrimination (AUC = 0.942, 95% CI: 0.904–0.980), accuracy (0.913), and maintained good calibration (Brier score = 0.080). Shapley additive explanations (SHAP) identified creatinine, troponin T, and albumin as key predictors, validating clinical plausibility and enabling instance-level explanations for CDSS deployment. Decision-curve analysis confirmed superior net benefit against treat-all or treat-none strategies across clinically relevant thresholds. We propose a framework for integrating this interpretable model into electronic health records to provide real-time risk scores at the point of care. Calibration drift in older adults highlights the need for age-specific refinement, underscoring the value of transparent, evaluable AI in clinical informatics.
DOI: 10.6084/m9.figshare.31344159.v1
title: Toward an explainable AI-Based clinical decision support system for predicting adverse outcomes in Rhabdomyolysis

description: Rhabdomyolysis is a severe condition with high morbidity and mortality, driven by complications like acute kidney injury. Early risk stratification remains challenging as traditional scores fail to capture complex data patterns. This study lays the foundation for an explainable AI (XAI)-based clinical decision support system (CDSS) by developing a machine learning model to predict the composite outcome of renal replacement therapy or 90-day mortality. Using routinely available admission data from 1031 adults, we applied multivariate imputation, Boruta feature selection, and ADASYN for class imbalance. The CatBoost model achieved the highest discrimination (AUC = 0.942, 95% CI: 0.904–0.980), accuracy (0.913), and maintained good calibration (Brier score = 0.080). Shapley additive explanations (SHAP) identified creatinine, troponin T, and albumin as key predictors, validating clinical plausibility and enabling instance-level explanations for CDSS deployment. Decision-curve analysis confirmed superior net benefit against treat-all or treat-none strategies across clinically relevant thresholds. We propose a framework for integrating this interpretable model into electronic health records to provide real-time risk scores at the point of care. Calibration drift in older adults highlights the need for age-specific refinement, underscoring the value of transparent, evaluable AI in clinical informatics.
DOI: 10.15468/dl.6ktzzv
title: Occurrence Download

description: A dataset containing 626 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Glischrocaryon behrii",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 626 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021354-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10211352
title: Replication package

description: Replication package. Paper: Towards Recommending Refactoring Operations to SupportBug Fixing
DOI: 10.5281/zenodo.7708512
title: Replication package

description: Replication package. Paper: Towards Recommending Refactoring Operations to SupportBug Fixing
DOI: 10.15468/dl.8gmdh8
title: Occurrence Download

description: A dataset containing 1053 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gonocarpus elatus",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1053 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021355-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14854072
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.w97478
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Congo, Democratic Republic of the",
 "Geometry POLYGON((19.935 -2.7652,20.09331 -3.08373,20.11662 -3.14854,20.74264 -3.2837,21.27453 -3.50672,22.85843 -3.52792,23.1098 -3.40572,23.28542 -3.40572,23.39717 -3.35791,23.7484 -3.29416,23.83856 -3.15905,23.96711 -3.04674,23.90239 -3.01606,24.00758 -2.84244,24.1156 -2.52883,23.99195 -2.23351,23.90337 -1.61782,23.8225 -1.0596,23.62709 -0.77355,23.28996 -0.70614,23.03635 -0.71819,22.32915 -0.38588,22.04778 -0.37864,21.80185 -0.41933,21.3585 -0.25688,20.95393 -0.16167,20.56434 -0.24892,20.28415 -0.35475,20.16671 -0.69238,20.01991 -0.98594,19.97587 -1.2061,19.94651 -1.57299,19.98751 -1.97849,19.93236 -2.19893,19.81439 -2.39661,19.935 -2.7652))",
 "HasCoordinate is true",
 "TaxonKey is Pan paniscus",
 "Year 1980-2026"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021356-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.98w7bg
title: Occurrence Download

description: A dataset containing 1782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myriophyllum aquaticum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1782 records from 258 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021358-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3e6tbn
title: Occurrence Download

description: A dataset containing 555 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dalbergia latifolia"
 ]
}

 The dataset includes 555 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021359-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31341739
title: WASRdata

description: WASR的数据。
DOI: 10.6084/m9.figshare.31341739.v1
title: WASRdata

description: WASR的数据。
DOI: 10.15468/dl.fuzd6z
title: Occurrence Download

description: A dataset containing 7743 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myriophyllum spicatum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 7743 records from 344 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021360-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.faa8nz
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trihaloragis hexandra",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 106 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021361-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31342729
title: FimH-All-Raw-Data

description: Structural Rewiring of the Mannose-Binding Pocket Reveals Pathoadaptive FimH Mutations that Enhance Uroplakin-Associated Glycan Recognition and Uropathogenic Adhesion
DOI: 10.6084/m9.figshare.31342729.v1
title: FimH-All-Raw-Data

description: Structural Rewiring of the Mannose-Binding Pocket Reveals Pathoadaptive FimH Mutations that Enhance Uroplakin-Associated Glycan Recognition and Uropathogenic Adhesion
DOI: 10.15468/dl.5k5xwe
title: Occurrence Download

description: A dataset containing 1200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corylopsis sinensis",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1200 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021362-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3326h4
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Distylium buxifolium",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 110 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021363-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9mk6ce
title: Occurrence Download

description: A dataset containing 1555 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sechium"
 ]
}

 The dataset includes 1555 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021364-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.