cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17188/1263036
title: Materials Data on SrFeO3 by Materials Project

description: SrFeO3 is (Cubic) Perovskite structured and crystallizes in the cubic Pm-3m space group. The structure is three-dimensional. Sr is bonded to twelve equivalent O atoms to form SrO12 cuboctahedra that share corners with twelve equivalent SrO12 cuboctahedra, faces with six equivalent SrO12 cuboctahedra, and faces with eight equivalent FeO6 octahedra. All Sr–O bond lengths are 2.77 Å. Fe is bonded to six equivalent O atoms to form FeO6 octahedra that share corners with six equivalent FeO6 octahedra and faces with eight equivalent SrO12 cuboctahedra. The corner-sharing octahedral tilt angles are 0°. All Fe–O bond lengths are 1.96 Å. O is bonded to four equivalent Sr and two equivalent Fe atoms to form a mixture of distorted edge, face, and corner-sharing OSr4Fe2 octahedra. The corner-sharing octahedra tilt angles range from 0–60°.
DOI: 10.5281/zenodo.6993693
title: Data used in: 'Atmospheric impacts of chlorinated very short-lived substances over the recent past – Part 1: Stratospheric chlorine budget and the role of transport' by Bednarz et al. (2022)

description: Data used in: 'Atmospheric impacts of chlorinated very short-lived substances over the recent past – Part 1: Stratospheric chlorine budget and the role of transport' by Bednarz et al. (2022), which has been accepted for publication in Atmospheric Chemistry and Physics.
description: Experiment names have been changed during writing up, see below for the names used in the datasets and the ACP article: NAME IN DATASET -&gt; NAME IN ARTICLE; BASE -&gt; BASE; NUDGEDBASE -&gt; BASE(SD5); NUDGEDBASE_ERAI -&gt; BASE(SDI); LBC -&gt; VSLS ; NUDGEDLBC -&gt; VSLS(SD5); NUDGEDLBC_ERAI -&gt; VSLS(SDI); The units are kg-tracer/kg-air for all tracer concentrations, kg-HCl/kg-air for total chlorine, and seconds for age-of-air.
DOI: 10.5285/0844186db1ba9e20319a2560f8d61651
title: British Antarctic Survey Twin Otter aircraft Meteorological Airborne Science INstrumentation (MASIN) core data for the Aerosol Cloud Coupling and Climate Interactions in the Arctic (ACCACIA) project.

description: ACCACIA was part of the NERC Arctic research programme. (NERC Reference: NE/I028858/1). ACCACIA aimed to improve our understanding of aerosol-cloud interactions in the Arctic, and the potential changes and feedbacks that may result from decreasing Arctic sea ice cover in the future. In situ measurements have been made during two field campaigns utilising ship-based measurements of surface aerosol sources and airborne measurements of aerosol and cloud microphysical properties, boundary layer dynamics, and radiative forcing. The observations have been complemented by modelling studies on a range of scales: from explicit aerosol and cloud microphysics process modelling, through large eddy simulation and mesoscale models, up to global climate models. This dataset contains meteorological data measured by the Meteorological Airborne Science INstrumentation (MASIN) onboard the British Antarctic Survey Twin Otter aircraft in the North Sea and Svalbard, Norway during the Aerosol Cloud Coupling and Climate Interactions in the Arctic (ACCACIA) project (2013).
DOI: 10.6084/m9.figshare.19232397.v1
title: Raw data on all rats

description: Raw data on all rats in the Catha edulis toxicity study<br>
DOI: 10.6073/pasta/ce4fa7fbbe6f5979e84ca1e15f9c8353
title: Fire Behavior: Biodiversity II: Effects of Plant Biodiversity on Population and Ecosystem Processes

description: Biodiversity II (E120) is designed to determine how the number of plant species affects the dynamics of ecological processes at the population, community, and ecosystem levels. By experimentally manipulating the number of species and the kinds of species, the amount of plant growth and the change from year to year, that result can be examined. Plots are large (9m x 9m actively maintained) and well-replicated, allowing responses of plant pathogens, insect herbivores, seed predators, soil parameters, invasive plant species and other variables to also be studied. Plots were seeded in May 1994 to have 1, 2, 4, 8, or 16 species, with roughly 30 replicates of each diversity level. The species composition of each plot was chosen by random draw from a pool of 18 grassland perennials that included four warm-season (C4) grasses, four cool-season (C3) grasses, four legumes, four non-legume forbs, and two woody species. All species occur in monoculture allowing comparison of responses of each species in monoculture to combinations of these same species. The experiment was established in 1994 by the lead investigators David Tilman, Peter Reich, Johannes Knops, and David Wedin. Experiment 120 is similar to Experiment 123, but it uses larger plots to provide a large capacity for long-term subexperiments.
DOI: 10.6084/m9.figshare.16970701.v1
title: Questionnaire data

description: Data set on sociodemographic information, human and veterinary uses of Catha edulis<br>
DOI: 10.5281/zenodo.6050002
title: Supplementary Materials: Laser-solid interaction studies enabled by the new capabilities of the iP2 BELLA PW beamline

description: <pre>Supplementary Materials ======================= Corresponding manuscript: "Laser-solid interaction studies enabled by the new capabilities of the iP2 BELLA PW beamline" by Sahel Hakimi, Lieselotte Obst-Huebl, Axel Huebl, Kei Nakamura, Stepan S. Bulanov, Sven Steinke, Wim P. Leemans, Zachary Kober, Tobias M. Ostermayr, Thomas Schenkel, Anthony J. Gonsalves, Jean-Luc Vay, Jeroen van Tilborg, Csaba Toth, Carl B. Schroeder, Eric Esarey, and Cameron G.R. Geddes (2022) Structure of this Archive ------------------------- This archive is structured as follows in sub-directories: - `WarpXsource/`: the simulation source code, build instructions/documentation and references - `WarpXDataAndInputs/`: the simulation inputs, submission scripts, and representative output - `FigureDataAndScripts/`: the analysis scripts and, where applicable, processed data for individual figures Note that raw data output of simulations is approximately 180 TByte per simulation and can thus not easily be shared in this data archive. Instead, we make all source code, documenation and build instructions, selected processed/reduced data, and relevant analysis scripts available to ensure reproducibility of the raw data basis. Please see the individual subdirectories for further `README.txt` files. Contacts -------- For general questions about the publication and data archive, please contact the corresponding authors. Please see the archive metadata and the publication manuscript for contacts.</pre>
description: This work was supported by the U.S. Department of Energy (DOE) Office of Science, Offices of Fusion En- ergy Science (FES) and High Energy Physics, Laser- NetUS, and used resources at NERSC under contract No. DE-AC02-05CH11231, as well as OLCF (DE-AC05- 00OR22725). S. Hakimi was supported by the U.S. DOE FES Postdoctoral Research Program administered by the Oak Ridge Institute for Science and Education (ORISE) for the DOE. ORISE is managed by Oak Ridge Asso- ciated Universities (ORAU) under Contract No. DE- SC0014664. All opinions expressed in this paper are the author's and do not necessarily reflect the policies and views of DOE, ORAU, or ORISE. WarpX was supported by the Exascale Computing Project (17-SC-20-SC), a col- laborative effort of two U.S. DOE organizations (Office of Science and the National Nuclear Security Adminis- tration).
DOI: 10.6073/pasta/5c2f17c295413da2a2a091fd7696af40
title: Biomass Inventories at Harvard Forest EMS Tower since 1993

description: In 1993, we installed 40 circular, 10 m radius biometric plots in the footprint of the EMS tower on Prospect Hill. We randomly placed the plots within 100 m increments along ten 500 m transects that extend from the tower in the northwest and southwest directions. In 2001, we removed three plots (G3, H3, H4) from the datasets and ceased measurements there due to their inundation by a beaver pond. In 1999, we installed 6 additional circular, 10 m radius biometric plots on the Simes Lot, adjacent to Prospect Hill to study the effects of a selective harvest that occurred there in the winter of 2000-01. In the summer of 2001, we expanded the harvested plots in size to 15 m radius and ceased measurements at one plot (X4) because it was unaffected by the harvest. The harvest also affected three of the original tower plots (A4, A5, B5), which were expanded in size as a part of the harvest plot group. Consequently, there are 34 tower plots and 8 harvest plots. We have taken the following ecological measurements at each site: tree growth, woody debris, litter, leaf area increment (LAI), leaf chemistry, and soil respiration and moisture.
DOI: 10.15121/1441453
title: Wister, CA Downhole and Seismic Data

description: This submission contains Downhole geophysical logs associated with Wister, CA Wells 12-27 and 85-20. The logs include Spontaneous Potential (SP), HILT Caliper (HCAL), Gamma Ray (GR), Array Induction (AIT), and Neutron Porosity (NPOR) data. Also included are a well log, Injection Test, Pressure Temperature Spinner log, shut in temperature survey, a final well schematic, and files about the well's location and drilling history. This submission also contains data from a three-dimensional (3D) multi-component (3C) seismic reflection survey on the Wister Geothermal prospect area in the northern portion of the Imperial Valley, California. The Wister seismic survey area was 13.2 square miles. (Resistivity image logs (Schlumberger FMI) in 85-20 indicate that maximum horizontal stress (Shmax) is oriented NNE but that open fractures are oriented suboptimally).
DOI: 10.18112/openneuro.ds003643.v2.0.0
title: Le Petit Prince: A multilingual fMRI corpus using ecological stimuli
DOI: 10.21227/wg71-v415
title: FMR-DB

description: Recently, the coronavirus pandemic has made the use of facial masks and respirators common, the former to reduce the likelihood of spreading saliva droplets and the latter as Personal Protective Equipment (PPE). As a result, this caused problems for the existing face detection algorithms. For this reason, and for the implementation of other more sophisticated systems, able to recognize the type of facial mask or respirator and to react given this information, we created the Facial Masks and Respirators Database (FMR-DB), that, unlike the other database released so far, also has an accurate classification of the most important types of facial masks and respirators.
DOI: 10.25500/edata.bham.00000695
title: Anthropogenic emission inventory DICE-EDGAR data for the year 2013
DOI: 10.5281/zenodo.1244034
title: Oms Project For Kriging Interpolation Of Precipitation And Temperature In Isarco River Valley

description: The OMS project contains the simulations, jar files of the components, the inputs and the ouputs used in the Chapter 6 of the thesis " A flexible approach to the estimation of water budgets and its connection to the travel time theory ", Bancheri (2017) and in the article "The design and implementatation of Kriging models in the Object Modelling System v.3.", Bancheri et al. 2018. The project allows the Kriging interpolation of the precipitation and temperature, using data from Isarco River Valley.
DOI: 10.5281/zenodo.4549764
title: A physiologically realistic virtual patient database for the study of arterial haemodynamics

description: This database contains a physiologically realistic virtual patient database (VPD), representing the human arterial system, for the primary purpose of studying the affects of arterial disease on haemodynamics.
DOI: 10.6084/m9.figshare.20651049
title: Supplementary Material for: Patient-Reported Outcomes and Predictive Factors following Focused Ultrasound Thalamotomy for Essential Tremor

description: <b><i>Introduction:</i></b> The objectives of this study were to determine long-term patient-reported outcomes with magnetic resonance-guided focused ultrasound (MRgFUS) thalamotomy for medication-refractory essential tremor (ET) and to identify risk factors for a poor clinical outcome. <b><i>Methods:</i></b> We administered a telephone or mail-in survey to patients who consecutively underwent unilateral MRgFUS thalamotomy for ET at our institution over an 8-year period. Patients were asked to self-report measures of hand tremor improvement, degree of overall postprocedure improvement, activities of daily life, side effects, and willingness to undergo the procedure again. Specific patient characteristics, ultrasound treatment parameters, and postoperative radiological findings from magnetic resonance imaging performed 1 day after the procedure were analyzed, and multivariable linear regression was used to determine if these factors could serve as predictors of clinical outcome. <b><i>Results:</i></b> A total of 85 patients were included in this study with a mean follow-up time of 3.0 years (range 2 months to 1 8.4 years). The mean patient-reported improvement in hand tremor at last follow-up was 66%, and 73% of patients reported meaningful change in their overall condition after the procedure. The percentages of patients reporting normal or only minimal limitations with feeding, drinking, and writing ability at last follow-up were 60%, 71%, and 48%, respectively. In the position of their former selves, 89% of patients would again choose to undergo the procedure. Larger lesions were correlated with a higher risk of adverse events. <b><i>Discussion/Conclusion:</i></b> While subjective hand tremor improvement declines with time, willingness to undergo the procedure again following MRgFUS thalamotomy for ET remains very high even several years after the procedure.
DOI: 10.5066/f7js9njz
title: Fish and selected physical and chemical water-quality data for the U.S. Geological Survey Midwest Stream Quality Assessment

description: In 2013, the first of several Regional Stream Quality Assessments (RSQA) was done in the Midwest United States. The Midwest Stream Quality Assessment (MSQA) was a collaborative study by the U.S. Geological Survey National Water Quality Assessment and the U.S. Environmental Protection Agency National Rivers and Streams Assessment. One of the objectives of the RSQA, and thus the MSQA, is to characterize relations between stream ecology and water-quality stressors to determine the relative effects of these stressors on aquatic biota in streams. Data required to meet this objective included fish species and abundance data and physical and chemical water-quality characteristics of the ecological reaches of the sites that were sampled. This dataset comprises 135 fish species, 39,920 fish, 10 selected water-quality stressor metrics, and six selected fish community stressor response variables for 98 sites sampled for the MSQA.
DOI: 10.5281/zenodo.6842025
title: Automated systematic evaluation of cryo-EM specimens with SmartScope - Trained models for square and hole detectors

description: Trained models used by SmartScope for square and hole detection.
DOI: 10.5281/zenodo.6974414
title: Supplementary materials (s.m.) of "The first report on detecting SARS-CoV-2 inside bacteria of the human gut microbiome: A case series on asymptomatic family members and a child with COVID-19".

description: These are Supplementary materials of the version 2 of the article published at the following link: https://f1000research.com/articles/11-135/v2. The article is: Brogna C, Cristoni S, Petrillo M <em>et al.</em> The first report on detecting SARS-CoV-2 inside bacteria of the human gut microbiome: A case series on asymptomatic family members and a child with COVID-19 [version 2; peer review]. <em>F1000Research</em> 2022, <strong>11</strong>:135 (https://doi.org/10.12688/f1000research.77421.2)
DOI: 10.5281/zenodo.48780
title: Rosetta Decoy Datasets

description: Rosetta decoy training sets for various uses.
DOI: 10.48588/jpl.221447
title: Data for publication "An Assessment of Reprocessed GPS/MET Observations Spanning 1995-1997"

description: Atmospheric measurements
DOI: 10.5281/zenodo.5081242
title: GLIB: image dataset

description: data/images: <em>data/images/Base</em> : 132 screenshots of game1 & game2 with UI display issues from 466 test reports. <em>data/images/Code</em> : 9,412 screenshots of game1 & game2 with UI display issues generated by our Code augmentation method. <em>data/images/Normal</em>: 7,750 screenshots of game1 & game2 without UI display issues collected by randomly traversing the game scene. <em>data/images/Rule(F)</em> : 7,750 screenshots of game1 & game2 with UI display issues generated by our Rule(F) augmentation method. <em>data/images/Rule(R)</em> : 7,750 screenshots of game1 & game2 with UI display issues generated by our Rule(R) augmentation method. <em>data/images/testDataSet</em> : 192 screenshots with UI display issues from 466 test reports(exclude game1 & game2). data/data_csv: <em>data/data_csv/Base</em> : dataset for baseline method. <em>data/data_csv/Code</em> : dataset for our Code Augmentation method. <em>data/data_csv/Rule(F)</em> : dataset for our Rule(F) Augmentation method. <em>data/data_csv/Rule(R)</em> : dataset for our Rule(R) Augmentation method. <em>data/data_csv/Code_plus_Rule(F)</em> : dataset for our Code&Rule(F) Augmentation method. <em>data/data_csv/Code_plus_Rule(R)</em> : dataset for our Code&Rule(R) Augmentation method. <em>data/data_csv/testDataSet</em> : test dataset(normal image and real glitch images from 466 test reports).
DOI: 10.5281/zenodo.5724576
title: Wflow SBM streamflow estimates for CAMELS data set

description: The dataset contains 3 simulated timeseries at the basin outlet for the CAMELS dataset created with the wflow_sbm model at various spatial resolutions (3km, 1km, 200m). The data set includes the calculated objective functions NSE, KGE 2009, KGE 2012, and KGE NP.
DOI: 10.5281/zenodo.6337593
title: AWI-CM3 version 3.0 historic, 4XCO2, 1% CO2 data

description: Historical simulation output from AWI-CM3 version 3.0 Years: 1850-2014 Frequency: Annual means Variables: T2M: near surface (2m) air temperature PRECIP: precipitation SSR: Surface solar radiation STR: Surface thermal radiation SSRD: Surface solar downward radiation TTR: Top thermal radiation TCC: Total cloud cover CI: Sea ice concentration (on atmospheric grid) CP: Convective precipitation LSP: Large scale precipitation U10M: 10meter eastward wind V10M: 10meter northward wind U: 300hPa eastward wind V: 300hPa northward wind Z: 500hPa geopotential height a_ice: sea ice concentration (on ocean mesh) m_ice: sea ice mass per unit area temp: 3D ocean temperature sst: sea surface temperature w: vertical velocity MLD2: Mixed layer depth according to Large et al. (https://doi.org/10.1175/1520-0485(1997)027%3C2418:STSFAB%3E2.0.CO;2) 4xCO2 simulation output from AWI-CM3 version 3.0 Years: 1850-1970 Frequency: Annual means Variables: T2M: near surface (2m) air temperature TTR: Top thermal radiation TSR: Top solar radiation 1% per year increased of CO2 simulation output from AWI-CM3 version 3.0 Years: 1850-2010 Frequency: Annual means Variables: T2M: near surface (2m) air temperature
DOI: 10.5281/zenodo.6828906
title: Multiscale light-sheet organoid imaging framework

description: These two files correspond to the data associated with the light-sheet recordings and time-course recordings utilized for the manuscript entitled "Multiscale light-sheet organoid imaging framework".<br> If access to the imaging data is needed, (which in total comprises of ~700 GB), please contact Prisca Liberali (prisca.liberali@fmi.ch) for more information.
DOI: 10.5284/1000069
title: Anglo-Saxon Kent Electronic Database (ASKED)

description: The Anglo-Saxon Kent Electronic Database (ASKED) is a collaboratively built research tool, developed to facilitate the doctoral research of two students of the UCL Institute of Archaeology: Stuart Brookes, investigating state formation in Anglo-Saxon East Kent, and Sue Harrington, examining aspects of gender and craft production in early Anglo-Saxon England with particular reference to the early kingdom of Kent. The aim of ASKED was to enumerate all those individuals within eastern Kent for the period AD 400-750 for whom there is archaeological burial evidence. The project produced a comprehensive electronic register of the archaeological remains and material culture of these populations, thus providing for the first time a searchable corpus of this information. The database lists 52 cemeteries from eastern Kent, as well as the inhumations and objects interred within. Information for these burials is derived from published reports and the inspection of museum archival material.
DOI: 10.6084/m9.figshare.20153645.v1
title: original data

description: Original data
DOI: 10.15129/ab3e0b31-fcee-432e-995f-687a7446d045
title: Data for: "Propagation of errors and quantitative quantum simulation with quantum advantage"

description: This dataset contains data corresponding to the figures in the paper, "Propagation of errors and quantitative quantum simulation with quantum advantage". The data was produced through numerical simulations using C++. All data is saved as Matlab ".mat" files, and in the zip folder we also provide Matlab scripts for plotting the data. The plot scripts include the corresponding figure number in the name. The purpose is for future studies to be able to quantitively compare to results presented in the paper.
DOI: 10.23708/rjdlcn
title: Test data, reports and documentation for CulebrONT software: a streamlined long reads multi-assembler pipeline for prokaryotic and eukaryotic genomes

description: Related to CulebrONT software, this dataset includes: - data used to test the software - 2 reports generated by the software : from the test data and from other data - supplementary technical information about CulebrONT pipeline
DOI: 10.26302/sshade/experiment_gm_20220122
title: Raman spectra of some chlorate minerals
DOI: 10.5281/zenodo.1305180
title: Ammonia Emission Measurements Of An Intensively Grazed Pasture - Dataset

description: Dataset presented and referenced in the corresponding Biogeosciences publication by Voglmeier et al. (2018) [see Related identifiers]. The dataset results from a field experiment in Posieux, Switzerland. During that experiment ammonia emissions of two pasture systems were measured over an entire grazing season in 2016. The spreadsheet file contains half-hourly values of measured ammonia concentration data, computed ammonia emissions, weather and turbulence data. Additionally the calculated nitrogen in the excretion of the cows and the grazing management is given. Detailed information on the measurement methods and the data evaluation is presented in Voglmeier et al. (2018).
description: The authors gratefully acknowledge the funding from the Swiss National Science Foundation (Project NICEGRAS, number 155964) which enabled the realisation of the experiment.
DOI: 10.5281/zenodo.5223410
title: Rapid adaptation in Intercropped Systems

description: R code and dataset for the study <strong>Rapid transgenerational adaptation in response to intercropping increases facilitation and reduces competition. </strong>