cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.6k564b
title: Occurrence Download

description: A dataset containing 1477 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opilio canestrinii",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1477 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085540-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25592/uhhfdm.18097
title: The DLA-RMR dataset: Annotated subset of RMR notebooks for CVC development

description: What’s new in this version: This is the first complete version (v1.0). All images are in .png format, and the dataset annotations are divided into training (80 images) and test (20 images) sets.<br>
<br>
This dataset is structured into four components, each serving a distinct role in the development of a document analysis system. 


 
 <strong>Word-level annotations</strong> are provided in the file <code>word_annotations_for_cropped_images.json</code>. These annotations describe the images contained in the <code>cropped_images</code> folder. Each entry specifies the location of a word as a polygon, together with its orientation (horizontal, vertical, or tilted) and the type of writing implement used (ink or pencil). Additional metadata, such as bounding boxes and segmentation areas, is also included.
 
 
 <strong>Cropped images</strong> are stored in the <code>cropped_images</code> folder. This set comprises 50 images, each containing only the primary page extracted from the corresponding full notebook scans.
 
 
 <strong>Full images</strong> are located in the <code>full_images</code> folder. This collection also contains 50 items, representing the complete notebook scans in which the primary page appears alongside other material.
 
 
 <strong>Page-level annotations</strong> are contained in the <code>page_annotations</code> folder. These are provided in YOLO format, with a single class (<code>page</code>) defined in <code>classes.txt</code>. Each annotation file specifies the bounding box of the primary page within the corresponding image in the <code>full_images</code> folder.
 


Examples illustrate the annotation structure. In the JSON file, a typical word annotation records polygon coordinates, the attribute <code>"orientation": "horizontal"</code>, and <code>"writing_tool": "pencil"</code>. In the YOLO annotations, a sample entry such as <code>0 0.499023 0.500776 0.777344 0.816912</code> denotes the normalised coordinates of the primary page bounding box.

<strong>Acknowledgement:</strong>

The research for this work was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy - EXC 2176 ‘Understanding Written Artefacts: Material, Interaction and Transmission in Manuscript Cultures’, project no. 390893796. The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg.<br>
<br>
The images are taken from notebook pages of Rainer Maria Rilke, from the Deutsche Literaturarchiv Marbach (DLA), A:Rilke-Archiv Gernsbach. 

We thank Hui Xu for her support in annotating the images.
DOI: 10.25592/uhhfdm.17931
title: The DLA-RMR dataset: Annotated subset of RMR notebooks for CVC development

description: What’s new in this version: This is the first complete version (v1.0). All images are in .png format, and the dataset annotations are divided into training (80 images) and test (20 images) sets.<br>
<br>
This dataset is structured into four components, each serving a distinct role in the development of a document analysis system. 


 
 <strong>Word-level annotations</strong> are provided in the file <code>word_annotations_for_cropped_images.json</code>. These annotations describe the images contained in the <code>cropped_images</code> folder. Each entry specifies the location of a word as a polygon, together with its orientation (horizontal, vertical, or tilted) and the type of writing implement used (ink or pencil). Additional metadata, such as bounding boxes and segmentation areas, is also included.
 
 
 <strong>Cropped images</strong> are stored in the <code>cropped_images</code> folder. This set comprises 50 images, each containing only the primary page extracted from the corresponding full notebook scans.
 
 
 <strong>Full images</strong> are located in the <code>full_images</code> folder. This collection also contains 50 items, representing the complete notebook scans in which the primary page appears alongside other material.
 
 
 <strong>Page-level annotations</strong> are contained in the <code>page_annotations</code> folder. These are provided in YOLO format, with a single class (<code>page</code>) defined in <code>classes.txt</code>. Each annotation file specifies the bounding box of the primary page within the corresponding image in the <code>full_images</code> folder.
 


Examples illustrate the annotation structure. In the JSON file, a typical word annotation records polygon coordinates, the attribute <code>"orientation": "horizontal"</code>, and <code>"writing_tool": "pencil"</code>. In the YOLO annotations, a sample entry such as <code>0 0.499023 0.500776 0.777344 0.816912</code> denotes the normalised coordinates of the primary page bounding box.

<strong>Acknowledgement:</strong>

The research for this work was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy - EXC 2176 ‘Understanding Written Artefacts: Material, Interaction and Transmission in Manuscript Cultures’, project no. 390893796. The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg.<br>
<br>
The images are taken from notebook pages of Rainer Maria Rilke, from the Deutsche Literaturarchiv Marbach (DLA), A:Rilke-Archiv Gernsbach. 

We thank Hui Xu for her support in annotating the images.
DOI: 10.5281/zenodo.17097588
title: GEO3-NEP: Global 0.05° Monthly NEP Estimates Based on the Third Law of Geography

description: GEO3-NEP is a global monthly net ecosystem productivity (NEP) product with 0.05° resolution for the period 2001–2024, generated by the Geospatial Similarity Law-based prediction model (GSLM_NEP). This product addresses the interpretability challenges and predictive limitations of traditional data-driven models, which are highly dependent on spatially biased flux samples. GEO3-NEP provides a product, which spatiotemporal distributions consistent with existing data-driven NEP products and incorporates uncertainty information, complementing traditional data-driven approaches.

Monthly files are named “YYYYMM_NEP.tif” and expressed in gC m-2 month-1, while annual files are named “YYYY_NEP.tif” and expressed in gC m-2 yr-1. Corresponding global uncertainty estimates are also available as monthly products, following the naming convention “YYYYMM_Uncertainty.tif”.
DOI: 10.15468/dl.6z4hxk
title: Occurrence Download

description: A dataset containing 3233 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ophiothrix angulata (Say, 1825)"
 ]
}

 The dataset includes 3233 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028678-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/e4f8wb
title: paraviewID_12_19.py

description: Paraview script for producing the vtu file containing all trajectories from time =12 to time=19
DOI: 10.57745/jqiv40
title: figure_atypique.py

description: Paraview script for producing the figure related to fibre 'atypique' trajectory
DOI: 10.57745/ymhyxv
title: assembly.py

description: Paraview script to assembly box raw files
DOI: 10.57745/6ihhbj
title: dyn081_12_124_112_246.raw

description: Raw binarized box for time=12 produced by extractboxforallrawfiles.py
DOI: 10.57745/aofd3l
title: figure_verticale.png

description: figure showing the trajectory for fibre 'verticale'
DOI: 10.57745/azpqtb
title: dyn081_10_124_112_246.raw

description: Raw binarized box for time=10 produced by extractboxforallrawfiles.py
DOI: 10.57745/bjcjxx
title: extractboxforallrawfiles.py

description: Python script for extracting contrast values and making binarization inside a reduced rectangular box for all time steps
DOI: 10.57745/bq0t3o
title: dyn081_18_124_112_246.raw

description: Raw binarized box for time=18 produced by extractboxforallrawfiles.py
DOI: 10.57745/djojfx
title: dyn081_4_124_112_246.raw

description: :unav
DOI: 10.57745/dnodym
title: dyn081_14_124_112_246.raw

description: Raw binarized box for time=14 produced by extractboxforallrawfiles.py
DOI: 10.57745/dozxfb
title: figure_atypique.png

description: figure showing the trajectory for fibre 'atypique'
DOI: 10.57745/eivaaa
title: dyn081_19_124_112_246.raw

description: Raw binarized box for time=19 produced by extractboxforallrawfiles.py
DOI: 10.57745/ekwx5d
title: figure_frisoti1.py

description: Paraview script for producing the figure related to fibre 'frisoti1' trajectory
DOI: 10.57745/eqdf4l
title: figure_coin.png

description: figure showing the trajectory for fibre 'coin'
DOI: 10.57745/feilwm
title: Flecimz.py

description: Function used in python script
DOI: 10.57745/gcw5ts
title: dyn081_13_124_112_246.raw

description: Raw binarized box for time=13 produced by extractboxforallrawfiles.py
DOI: 10.57745/gkoqhs
title: figure_frisoti1.png

description: figure showing the trajectory for fibre frisoti1
DOI: 10.57745/gphwtf
title: figure_frisoti2.py

description: Paraview script for producing the figure related to fibre 'frisoti2' trajectory
DOI: 10.57745/gtvhow
title: figure_coin.py

description: Paraview script for producing the figure related to fibre 'coin' trajectory
DOI: 10.57745/hokgdp
title: dyn081_9_124_112_246.raw

description: Raw binarized box for time=9 produced by extractboxforallrawfiles.py
DOI: 10.57745/idxrmt
title: paraviewID_0_11.py

description: Paraview script for producing the vtu file containing all trajectories from time =0 to time=11
DOI: 10.57745/m5voht
title: dyn081_2_124_112_246.raw

description: Raw binarized box for time=2 produced by extractboxforallrawfiles.py
DOI: 10.57745/mo4tue
title: dyn081_11_124_112_246.raw

description: Raw binarized box for time=11 produced by extractboxforallrawfiles.py
DOI: 10.57745/nwhrqc
title: dyn081_7_124_112_246.raw

description: Raw binarized box for time=7 produced by extractboxforallrawfiles.py
DOI: 10.57745/plncaa
title: dyn081_15_124_112_246.raw

description: Raw binarized box for time=15 produced by extractboxforallrawfiles.py
DOI: 10.57745/sjpl0x
title: figure_verticale.py

description: Paraview script for producing the figure related to fibre 'verticale' trajectory
DOI: 10.57745/tc9cxu
title: dyn081_0_124_112_246.raw

description: Raw binarized box for time=0 produced by extractboxforallrawfiles.py
DOI: 10.57745/tj8nso
title: Flecvolinfo.py

description: Function used in python script
DOI: 10.57745/tsjr6c
title: fibressg_0_11.vtu

description: VTU file produced by paraviewID_00_11.py and used in assembly.py
DOI: 10.57745/uqghvy
title: cut_for_frisoti1.py

description: Paraview script to clip fiber 'frisoti1'
DOI: 10.57745/uwlbhj
title: dyn081_17_124_112_246.raw

description: Raw binarized box for time=17 produced by extractboxforallrawfiles.py
DOI: 10.57745/vnek6b
title: dyn081_1_124_112_246.raw

description: Raw binarized box for time=1 produced by extractboxforallrawfiles.py
DOI: 10.57745/w5pk7o
title: dyn081_16_124_112_246.raw

description: Raw binarized box for time=16 produced by extractboxforallrawfiles.py
DOI: 10.57745/wspoha
title: frisoti2_fin.vtu

description: VTU file produced by cutforfrisoti2.py and used in assembly.py
DOI: 10.57745/wwtipq
title: coin.vtu

description: VTU file produced by assembly.py and used in figurecoin.py
DOI: 10.57745/x52uzp
title: dyn081_6_124_112_246.raw

description: Raw binarized box for time=6 produced by extractboxforallrawfiles.py
DOI: 10.57745/zciynv
title: dyn081_8_124_112_246.raw

description: Raw binarized box for time=8 produced by extractboxforallrawfiles.py
DOI: 10.57745/4opdxj
title: frisoti1_fin.vtu

description: VTU file produced by cutforfrisoti1.py and used in assembly.py
DOI: 10.57745/5nhpnz
title: readme_en.txt

description: Documentation and data description
DOI: 10.57745/9aptrn
title: cut_for_frisoti2.py

description: Paraview script for producing piece of trajectories for frisoti2 after clipping
DOI: 10.57745/ccqkxk
title: figure_frisoti2.png

description: figure showing the trajectory for fibre frisoti2
DOI: 10.57745/h4ubov
title: dyn081_3_124_112_246.raw

description: Raw binarized box for time=3 produced by extractboxforallrawfiles.py
DOI: 10.57745/htzi5h
title: Readme

description: Explanation for code
DOI: 10.57745/i5ejsp
title: dyn081_5_124_112_246.raw

description: Raw binarized box for time=5 produced by extractboxforallrawfiles.py
DOI: 10.57745/qbim7h
title: frisoti2.vtu

description: VTU file produced by assembly.py and used in figurefrisoti2.py
DOI: 10.57745/qmlaf0
title: atypique.vtu

description: VTU file produced by assembly.py and used in figureatypique.py
DOI: 10.57745/qxrc1j
title: frisoti1.vtu

description: VTU file produced by assembly.py and used in figurefrisoti1.py
DOI: 10.57745/xcnglh
title: fibressg_11_19.vtu

description: VTU file produced by paraviewID_12_19.py and used in assembly.py
DOI: 10.57745/y9wgb2
title: verticale.vtu

description: VTU file produced by assembly.py and used in figurevertcal.py
DOI: 10.57745/z2wifj
title: comments.pdf

description: Illustrated documentation
DOI: 10.15468/dl.q2zham
title: Occurrence Download

description: A dataset containing 739816 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Clangula hyemalis (Linnaeus, 1758)",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 739816 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028666-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14553173
title: Recorder trace files of 91 built-in tests from three widely-used I/O libraries

description: This dataset contains the Recorder trace files of 91 built-in tests from three widely-used I/O libraries.

It was utilized in our IPDPS '25 paper, VerifyIO: Verifying Adherence to Parallel I/O Consistency Semantics.

The dataset can be used to reproduce the results presented in the paper (see instructions here) and to conduct additional analyses.

 

License: CC BY 4.0

LLNL CP 2025-096
DOI: 10.5281/zenodo.14553174
title: Recorder trace files of 91 built-in tests from three widely-used I/O libraries

description: This dataset contains the Recorder trace files of 91 built-in tests from three widely-used I/O libraries.

It was utilized in our IPDPS '25 paper, VerifyIO: Verifying Adherence to Parallel I/O Consistency Semantics.

The dataset can be used to reproduce the results presented in the paper (see instructions here) and to conduct additional analyses.

 

License: CC BY 4.0

LLNL CP 2025-096
DOI: 10.15468/dl.am9u43
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidobatrachus asper Budgett, 1899"
 ]
}

 The dataset includes 104 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028681-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/ipinim
title: American Museum of Natural History (AMNH) Cnidaria Collection

description: AMNH Division of Invertebrate Zoology Cnidaria Collection
DOI: 10.6084/m9.figshare.29052134
title: Length of Stay, Social Support, and Sex Differences in Recovery E. Garrity & L. Jason Data File.sav

description: The Oxford House model is an expanding network of sober-living houses that aid individuals struggling with substance use disorders. Research exploring sober-living environments can be essential in understanding the factors that relate to sustained addiction recovery. This study examined whether sex differences were present within the relationship between perceived social support and recovery outcomes. This study also investigated whether length of stay within a recovery home mediated the relationship between perceived social support and one’s recovery outcomes. 352 Oxford House residents, from recovery homes in North Carolina, Texas, and Oregon, participated in the following study. Participants ranged from ages 18-70 (<i>M</i> = 37.54, <i>SD</i> = 10.74), where 52% of respondents disclosed their biological sex as male and 48% disclosed their biological sex as female.
DOI: 10.6084/m9.figshare.29052134.v1
title: Length of Stay, Social Support, and Sex Differences in Recovery E. Garrity & L. Jason Data File.sav

description: The Oxford House model is an expanding network of sober-living houses that aid individuals struggling with substance use disorders. Research exploring sober-living environments can be essential in understanding the factors that relate to sustained addiction recovery. This study examined whether sex differences were present within the relationship between perceived social support and recovery outcomes. This study also investigated whether length of stay within a recovery home mediated the relationship between perceived social support and one’s recovery outcomes. 352 Oxford House residents, from recovery homes in North Carolina, Texas, and Oregon, participated in the following study. Participants ranged from ages 18-70 (<i>M</i> = 37.54, <i>SD</i> = 10.74), where 52% of respondents disclosed their biological sex as male and 48% disclosed their biological sex as female.
DOI: 10.5066/p1hjavar
title: Coastal Single-beam Bathymetry Data Collected in 2023 from the Chandeleur Islands, Louisiana 

description: Scientists from the U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center (SPCMSC) conducted single-beam and multibeam bathymetry (Stalk and others, 2025) surveys around the northern Chandeleur Islands, Louisiana, from June 12 to 20 and from July 31 to August 9, 2023, as part of Field Activity Number (FAN) 2023-325-FA. The purpose of data collection was to measure submerged coastal elevations along the Chandeleur Islands, located in the Breton National Wildlife Refuge. Funded by the Extending Government Funding and Delivering Emergency Assistance Act (Public Law 117-43) enacted on September 30, 2021, these data, in combination with previous bathymetric data collected at the study area (Stalk and others, 2017; Stalk and others, 2020), can be used to quantify storm-related barrier island sediment redistribution following the 2020-2021 hurricane seasons. The survey encompassed approximately 760 square kilometers (km) of the gulf-side and sound-side nearshore environments around the northern Chandeleur Islands. The single-beam bathymetry was acquired using two 12-foot (ft) personal watercrafts and two boats (a 20-ft Twin Vee [TVEE] and a 17-ft Mako). All vessels were outfitted with high precision Global Navigation Satellite System receivers, motion reference units, and survey grade single-beam echosounders (SBES). Long Term Change (LTC) lines were collected by the TVEE as part of a comparative long term change analysis, but for this data release, LTC lines represent shore-perpendicular transects extending both offshore and soundward 3 km on either side of the island. Sub-bottom profile geophysical data were also collected during this FAN and are provided in Forde and others (2024).
Forde, A.S., Miselis, J.L., Stalk, C.A., and Buster, N.A., 2024, Chirp sub-bottom profile geophysical data collected in 2023 from the Chandeleur Islands, Louisiana: U.S. Geological Survey data release, https://doi.org/10.5066/P1HOLGKM.

Stalk, C.A., DeWitt, N.T., Bernier, J.C., Kindinger, J.G., Flocks, J.G., Miselis, J.L., Locker, S.D., Kelso, K.W., and Tuten, T.M., 2017, Coastal single-beam bathymetry data collected in 2015 from the Chandeleur Islands, Louisiana: U.S. Geological Survey Data Series 1039, https://doi.org/10.3133/ds1039.

Stalk, C.A., Miselis, J.L., Fredericks, J.J., DeWitt, N.T., and Reynolds, B.J., 2020, Coastal bathymetry data collected in September 2018 from the Chandeleur Islands, Louisiana: U.S. Geological Survey data release, https://doi.org/10.5066/P9E6E79E.

Stalk C.A., Bemelmans, C.C., and Miselis, J.L., 2025, Coastal bathymetry and backscatter data collected June-August 2023 from the Chandeleur Islands, Louisiana: U.S. Geological Survey data release, https://doi.org/10.5066/P1NWHXZS.
DOI: 10.15468/dl.anucw8
title: Occurrence Download

description: A dataset containing 39337 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((20.39557 10.62999,28.03175 7.65577,34.85388 11.4028,39.07529 18.55417,34.8981 31.6059,26.4181 32.21942,24.90607 32.37097,24.9545 22.47376,23.70771 19.23799,20.39557 10.62999))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bacteria"
 ]
}

 The dataset includes 39337 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028685-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15398321
title: Rheumatoid Arthritis Management: Implications of Steroid Use on Thyroid Function and Autoimmunity

description: Rheumatoid arthritis (RA) is a systemic autoimmune disease characterized by chronic inflammation and joint destruction. Glucocorticoids (GCs) are commonly employed in RA management due to their potent anti-inflammatory effects. However, their impact on thyroid function and autoimmunity remains a subject of clinical interest. This article explores the interplay between RA, Asteroid therapy, and thyroid dysfunction, emphasizing the need for vigilant monitoring and individualized treatment strategies.
DOI: 10.5281/zenodo.15398322
title: Rheumatoid Arthritis Management: Implications of Steroid Use on Thyroid Function and Autoimmunity

description: Rheumatoid arthritis (RA) is a systemic autoimmune disease characterized by chronic inflammation and joint destruction. Glucocorticoids (GCs) are commonly employed in RA management due to their potent anti-inflammatory effects. However, their impact on thyroid function and autoimmunity remains a subject of clinical interest. This article explores the interplay between RA, Asteroid therapy, and thyroid dysfunction, emphasizing the need for vigilant monitoring and individualized treatment strategies.
DOI: 10.5281/zenodo.15398311
title: Experimental and CFD Analysis of Ventilation Systems in a Layer House: Assessing Air Quality and Microclimate for Improved Poultry Welfare
DOI: 10.5281/zenodo.15398312
title: Experimental and CFD Analysis of Ventilation Systems in a Layer House: Assessing Air Quality and Microclimate for Improved Poultry Welfare