cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.hya5dm
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lepidium meyenii Walp.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 212 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110080-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7vd7kb
title: Occurrence Download

description: A dataset containing 4818 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lepidium sativum L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4818 records from 269 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110081-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8fpwkt
title: Occurrence Download

description: A dataset containing 1016 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leptochloa chinensis (L.) Nees)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1016 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110083-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xdczzt
title: Occurrence Download

description: A dataset containing 422 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leptodermis oblonga Bunge)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 422 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110084-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8fjqv
title: Occurrence Download

description: A dataset containing 297 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Fulica rufifrons Philippi & Landbeck, 1861"
 ]
}

 The dataset includes 297 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110085-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26885329
title: dataset of glass enbayments and inclusions.xlsx

description: Chemical compositions and estimated water contents in the glass embayments and inclusions in the phenocrysts collected from the pumiceous deposits of the explosive phase of the 1914 Sakurajima eruption. The dataset was obtained with the SEM-EDS system.
DOI: 10.6084/m9.figshare.26885329.v1
title: dataset of glass enbayments and inclusions.xlsx

description: Chemical compositions and estimated water contents in the glass embayments and inclusions in the phenocrysts collected from the pumiceous deposits of the explosive phase of the 1914 Sakurajima eruption. The dataset was obtained with the SEM-EDS system.
DOI: 10.15468/dl.uj3yje
title: Occurrence Download

description: A dataset containing 19308 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leptospermum scoparium Forst.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 19308 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110086-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.14059293.v1
title: Additional file 18 of Pineal gland transcriptomic profiling reveals the differential regulation of lncRNA and mRNA related to prolificacy in STH sheep with two FecB genotypes

description: Additional file 18: Supplementary material 8A. Total set of the top 20 KEGG enrichment pathways for differentially expressed mRNAs in MM_FP vs MM_LP. Supplementary material 8B. Total set of the top 20 KEGG enrichment pathways for differentially expressed mRNAs in MM_FP vs ww_FP. Supplementary material 8C. Total set of the top 20 KEGG enrichment pathways for differentially expressed mRNAs in MM_LP vs ww_LP. Supplementary material 8D. Total set of the top 20 KEGG enrichment pathways for differentially expressed mRNAs in ww_FP vs ww_LP.
DOI: 10.6084/m9.figshare.14583574.v1
title: Additional file 10 of The YAP/HIF-1α/miR-182/EGR2 axis is implicated in asthma severity through the control of Th17 cell differentiation

description: Additional file 10: Table S2. Human transcription factors retrieved from the Cistrome database.
DOI: 10.6084/m9.figshare.14583574
title: Additional file 10 of The YAP/HIF-1α/miR-182/EGR2 axis is implicated in asthma severity through the control of Th17 cell differentiation

description: Additional file 10: Table S2. Human transcription factors retrieved from the Cistrome database.
DOI: 10.6084/m9.figshare.14583580
title: Additional file 12 of The YAP/HIF-1α/miR-182/EGR2 axis is implicated in asthma severity through the control of Th17 cell differentiation

description: Additional file 12: Table S4. Downstream genes of miR-182 identified from the mirDIP database.
DOI: 10.6084/m9.figshare.14583580.v1
title: Additional file 12 of The YAP/HIF-1α/miR-182/EGR2 axis is implicated in asthma severity through the control of Th17 cell differentiation

description: Additional file 12: Table S4. Downstream genes of miR-182 identified from the mirDIP database.
DOI: 10.6084/m9.figshare.14583577
title: Additional file 11 of The YAP/HIF-1α/miR-182/EGR2 axis is implicated in asthma severity through the control of Th17 cell differentiation

description: Additional file 11: Table S3. Differentially expressed genes obtained from the GSE64913 dataset.
DOI: 10.6084/m9.figshare.14059296
title: Additional file 19 of Pineal gland transcriptomic profiling reveals the differential regulation of lncRNA and mRNA related to prolificacy in STH sheep with two FecB genotypes

description: Additional file 19: Supplementary material 9A. Co-expression details of DE lncRNA-mRNA after lncRNA targets coincided with DE mRNAs in MM_FP vs MM_LP. Supplementary material 9B. Co-expression details of DE lncRNA-mRNA after lncRNA targets coincided with DE mRNAs in MM_FP vs ww_FP. Supplementary material 9C. Co-expression details of DE lncRNA-mRNA after lncRNA targets coincided with DE mRNAs in MM_LP vs ww_LP. Supplementary material 9D. Co-expression details of DE lncRNA-mRNA after lncRNA targets coincided with DE mRNAs in ww_FP vs ww_LP.
DOI: 10.6084/m9.figshare.14583577.v1
title: Additional file 11 of The YAP/HIF-1α/miR-182/EGR2 axis is implicated in asthma severity through the control of Th17 cell differentiation

description: Additional file 11: Table S3. Differentially expressed genes obtained from the GSE64913 dataset.
DOI: 10.6084/m9.figshare.14059296.v1
title: Additional file 19 of Pineal gland transcriptomic profiling reveals the differential regulation of lncRNA and mRNA related to prolificacy in STH sheep with two FecB genotypes

description: Additional file 19: Supplementary material 9A. Co-expression details of DE lncRNA-mRNA after lncRNA targets coincided with DE mRNAs in MM_FP vs MM_LP. Supplementary material 9B. Co-expression details of DE lncRNA-mRNA after lncRNA targets coincided with DE mRNAs in MM_FP vs ww_FP. Supplementary material 9C. Co-expression details of DE lncRNA-mRNA after lncRNA targets coincided with DE mRNAs in MM_LP vs ww_LP. Supplementary material 9D. Co-expression details of DE lncRNA-mRNA after lncRNA targets coincided with DE mRNAs in ww_FP vs ww_LP.
DOI: 10.6084/m9.figshare.25222052
title: doubletroubledb data - Ensembl Fungi

description: This data set contains duplicated gene pairs, duplicated genes, and .collinearity files (as returned by the syntenet R package) for all species on Ensembl Fungi release 57.
DOI: 10.6084/m9.figshare.25222052.v1
title: doubletroubledb data - Ensembl Fungi

description: This data set contains duplicated gene pairs, duplicated genes, and .collinearity files (as returned by the syntenet R package) for all species on Ensembl Fungi release 57.
DOI: 10.15151/esrf-es-1526073326
title: Analysis of samples for CO2 hydrogenation

description: In this experiment, we want to measure Zn and Cu K-edges on six samples for CO2 hydrogenation. The samples are grouped into two sets: one is laboratory-prepared, and the second one is commercial. Each set is made of three samples: the first one is as prepared, the second one has been activated in H2, and the last one has followed a catalytic reaction in H2/CO2. The samples will be prepared as pellets and measured in transmission mode under a normal atmosphere.
The experiment aims to observe whether there are changes in the copper and zinc coordination/surroundings after the reactions, and when present, if these changes can be observed both in the industrial and laboratory-made samples.
DOI: 10.6084/m9.figshare.22274935
title: Association between PM<sub>2.5</sub> and hypertension among the floating population in China: a cross-sectional study

description: Few studies have investigated the association between PM<sub>2.5</sub> and hypertension among floating populations. We therefore examined the relationship using binary logistic regression. Each grade of increment in the annual average PM<sub>2.5</sub> (grade one: ≤15 µg/m<sup>3</sup>; grade two: 15–25 µg/m<sup>3</sup>; grade three: 25–35 µg/m<sup>3</sup> [Excluding 25]; grade four: ≥35 µg/m<sup>3</sup>) was associated with an increased risk of hypertension (odds ratio [OR] = 1.081, 95% confidence interval (CI): 1.034–1.129). Among the female floating population (OR = 1.114, 95% CI: 1.030–1.204), those with education level of primary school and below (OR = 1.140, 95% CI: 1.058–1.229), construction workers (OR = 1.228, 95% CI: 1.058–1.426), and those living in the eastern region of China (OR = 1.241, 95% CI: 1.145–1.346) were more vulnerable to PM<sub>2.5</sub>. These results indicate that PM<sub>2.5</sub> is positively associated with hypertension in floating populations. Floating populations who are female, less educated, construction workers, and living in the eastern region of China are more vulnerable to the adverse impacts of PM<sub>2.5</sub>.
DOI: 10.6084/m9.figshare.22274935.v1
title: Association between PM<sub>2.5</sub> and hypertension among the floating population in China: a cross-sectional study

description: Few studies have investigated the association between PM<sub>2.5</sub> and hypertension among floating populations. We therefore examined the relationship using binary logistic regression. Each grade of increment in the annual average PM<sub>2.5</sub> (grade one: ≤15 µg/m<sup>3</sup>; grade two: 15–25 µg/m<sup>3</sup>; grade three: 25–35 µg/m<sup>3</sup> [Excluding 25]; grade four: ≥35 µg/m<sup>3</sup>) was associated with an increased risk of hypertension (odds ratio [OR] = 1.081, 95% confidence interval (CI): 1.034–1.129). Among the female floating population (OR = 1.114, 95% CI: 1.030–1.204), those with education level of primary school and below (OR = 1.140, 95% CI: 1.058–1.229), construction workers (OR = 1.228, 95% CI: 1.058–1.426), and those living in the eastern region of China (OR = 1.241, 95% CI: 1.145–1.346) were more vulnerable to PM<sub>2.5</sub>. These results indicate that PM<sub>2.5</sub> is positively associated with hypertension in floating populations. Floating populations who are female, less educated, construction workers, and living in the eastern region of China are more vulnerable to the adverse impacts of PM<sub>2.5</sub>.
DOI: 10.6084/m9.figshare.22317086
title: Genomic-wide analysis approach revealed genomic similarity for environmental Mexican <i>S</i>. Oranienburg genomes

description: As the human population grows, an increase in food trade is needed. This elevates the risk of epidemiological outbreaks. One of the prevalent pathogens associated with food production in Mexico has been Salmonella Oranienburg. Effective surveillance systems require microbial genetic knowledge. The objective of this work is to describe the genetic composition of Mexican S. Oranienburg genomes. For that, 53 strains from different environmental sources were isolated and sequenced. Additionally, 109 S. Oranienburg genomes were downloaded. Bioinformatic analyses were used to explore the clonal complex and genomic relatedness. A major clonal group formed by ST23 was identified comprising four STs. 202 SNPs were found the maximum difference among isolates. Virulence genes for host invasion and colonization as rpoS, fimbria type 1, and, T3SS were found common for all isolates. This study suggests that Mexican S. Oranienburg strains are potential pathogens circulating continuously in the region between host and non-host environments.
DOI: 10.6084/m9.figshare.22317086.v1
title: Genomic-wide analysis approach revealed genomic similarity for environmental Mexican <i>S</i>. Oranienburg genomes

description: As the human population grows, an increase in food trade is needed. This elevates the risk of epidemiological outbreaks. One of the prevalent pathogens associated with food production in Mexico has been Salmonella Oranienburg. Effective surveillance systems require microbial genetic knowledge. The objective of this work is to describe the genetic composition of Mexican S. Oranienburg genomes. For that, 53 strains from different environmental sources were isolated and sequenced. Additionally, 109 S. Oranienburg genomes were downloaded. Bioinformatic analyses were used to explore the clonal complex and genomic relatedness. A major clonal group formed by ST23 was identified comprising four STs. 202 SNPs were found the maximum difference among isolates. Virulence genes for host invasion and colonization as rpoS, fimbria type 1, and, T3SS were found common for all isolates. This study suggests that Mexican S. Oranienburg strains are potential pathogens circulating continuously in the region between host and non-host environments.
DOI: 10.6084/m9.figshare.23607810.v1
title: A quantification and analysis of historical sectoral and regional water withdrawals in Canada

description: Canada is a water rich country with one of the highest annual water uses per person among developed countries. This study provides a systematic, comprehensive analysis of recent data on this water use at national and subnational scales. It spatially disaggregates surveyed data from Statistics Canada (StatCan) to develop a historical dataset from 2005-2018 for Canadian water withdrawals at provincial and river basin scales for seven water use sectors: domestic use, manufacturing, irrigation, livestock, mining, oil and gas and thermal power generation. Additionally, sectoral water withdrawals are estimated for each province-river basin combination. Sectoral priorities are analyzed at the provincial and river basin scales and historical trends are identified. Water use intensity indicators are calculated and compared between different provinces, and a water stress index is used to identify regions most prone to water shortages. We find that water use decreased nationally over the study years for all sectors except irrigation, mining and oil and gas. Ontario had the highest water use of all provinces, mainly for thermal power generation. Manufacturing and domestic sectors were the dominant users in Quebec and British Columbia while the Prairies had more diversified uses. Domestic water use per capita values in Newfoundland & Labrador and Quebec are higher than the national average and all global values included in the study for comparison. Finally, the irrigation sector withdraws the most water per $GDP nationally while the oil and gas sector withdraws the least. Dataset development faced challenges related to data availability and uncertainties in downscaling assumptions. These challenges are described, and emphasize the need for a systematic and standardized approach to water data gathering and sharing in Canada.
DOI: 10.6084/m9.figshare.21901899
title: Selection of appropriate on-site household sanitation options for rural communities of Zimbabwe – case of Mbire district, Zimbabwe

description: Selecting an appropriate sanitation option involves multiple stakeholders with often conflicting objectives. A multiple criteria decision analysis (MCDA) framework was developed to inform decision makers on selecting appropriate sanitation options for rural communities. Criteria established from literature were evaluated and weighted on-line by stakeholders. A performance matrix was developed by assigning weights to criteria and scoring alternatives. Selection of alternatives was based on a composite appropriateness index from a rank using the simple multi-attribute ranking technique. The framework was evaluated by verification, validation and sensitivity analysis. Five alternatives were evaluated on 14 decision criteria. The first preferred alternative was the urine diverting dry toilet (72.54) then the Blair ventilated improved pit latrine (67.10). The framework was commented as reasonable and robust. A simple and transparent MCDA framework was developed considering local conditions in a participatory manner to select appropriate alternatives for rural sanitation where a single option is encouraged.
DOI: 10.6084/m9.figshare.23607810
title: A quantification and analysis of historical sectoral and regional water withdrawals in Canada

description: Canada is a water rich country with one of the highest annual water uses per person among developed countries. This study provides a systematic, comprehensive analysis of recent data on this water use at national and subnational scales. It spatially disaggregates surveyed data from Statistics Canada (StatCan) to develop a historical dataset from 2005-2018 for Canadian water withdrawals at provincial and river basin scales for seven water use sectors: domestic use, manufacturing, irrigation, livestock, mining, oil and gas and thermal power generation. Additionally, sectoral water withdrawals are estimated for each province-river basin combination. Sectoral priorities are analyzed at the provincial and river basin scales and historical trends are identified. Water use intensity indicators are calculated and compared between different provinces, and a water stress index is used to identify regions most prone to water shortages. We find that water use decreased nationally over the study years for all sectors except irrigation, mining and oil and gas. Ontario had the highest water use of all provinces, mainly for thermal power generation. Manufacturing and domestic sectors were the dominant users in Quebec and British Columbia while the Prairies had more diversified uses. Domestic water use per capita values in Newfoundland & Labrador and Quebec are higher than the national average and all global values included in the study for comparison. Finally, the irrigation sector withdraws the most water per $GDP nationally while the oil and gas sector withdraws the least. Dataset development faced challenges related to data availability and uncertainties in downscaling assumptions. These challenges are described, and emphasize the need for a systematic and standardized approach to water data gathering and sharing in Canada.
DOI: 10.6084/m9.figshare.21901899.v1
title: Selection of appropriate on-site household sanitation options for rural communities of Zimbabwe – case of Mbire district, Zimbabwe

description: Selecting an appropriate sanitation option involves multiple stakeholders with often conflicting objectives. A multiple criteria decision analysis (MCDA) framework was developed to inform decision makers on selecting appropriate sanitation options for rural communities. Criteria established from literature were evaluated and weighted on-line by stakeholders. A performance matrix was developed by assigning weights to criteria and scoring alternatives. Selection of alternatives was based on a composite appropriateness index from a rank using the simple multi-attribute ranking technique. The framework was evaluated by verification, validation and sensitivity analysis. Five alternatives were evaluated on 14 decision criteria. The first preferred alternative was the urine diverting dry toilet (72.54) then the Blair ventilated improved pit latrine (67.10). The framework was commented as reasonable and robust. A simple and transparent MCDA framework was developed considering local conditions in a participatory manner to select appropriate alternatives for rural sanitation where a single option is encouraged.
DOI: 10.6084/m9.figshare.14583607
title: Additional file 9 of The YAP/HIF-1α/miR-182/EGR2 axis is implicated in asthma severity through the control of Th17 cell differentiation

description: Additional file 9: Table S1. Differentially expressed genes identified in GSE27876 dataset.
DOI: 10.6084/m9.figshare.14583607.v1
title: Additional file 9 of The YAP/HIF-1α/miR-182/EGR2 axis is implicated in asthma severity through the control of Th17 cell differentiation

description: Additional file 9: Table S1. Differentially expressed genes identified in GSE27876 dataset.
DOI: 10.6084/m9.figshare.7243574
title: Low-intensity pulsed ultrasound promotes proliferation and migration of HaCaT keratinocytes through the PI3K/AKT and JNK pathways

description: Although the effects of low-intensity pulsed ultrasound (LIPUS) on diverse cell types have been fully studied, the functional role of LIPUS in keratinocytes remains poorly understood. This study aimed to investigate the effects of LIPUS on proliferation and migration of HaCaT cells as well as the regulatory mechanisms associated with signaling pathways. Human HaCaT cells were exposed or not to LIPUS, and cell proliferation and migration were measured by BrdU incorporation assay and Transwell assay, respectively. Expression of proteins associated with proliferation and migration was evaluated by western blot analysis. Expression of key kinases in the PI3K/AKT and JNK pathways was also evaluated by western blot analysis. Effects of LIPUS on the PI3K/AKT and JNK pathways, and whether LIPUS affected HaCaT cells via these two pathways were finally explored. When the parameter of LIPUS (number of cycles) was set at 300, cell viability was the highest after LIPUS stimulation. We then found that the percentage of BrdU positive cells was enhanced by LIPUS, along with up-regulation of cyclinD1, CDK6, CDK4, and VEGF. LIPUS promoted migration, as well as up-regulation of MMP-2 and MMP-9. Phosphorylation levels of key kinases in the PI3K/AKT and JNK pathways were increased by LIPUS. Inhibition of either PI3K/AKT pathway or JNK pathway attenuated effects of LIPUS on HaCaT cells, and co-inhibition of these two pathways showed augmented effects. LIPUS promoted proliferation and migration of HaCaT cells through activating the PI3K/AKT and JNK pathways.