cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13710748
title: Data Sharing Practices in the MRC Circadian Mental Health Network.

description: This dataset supports the research conducted within the MRC Circadian Mental Health Network which assesses data sharing practices among Principal Investigators' publications in 2023. This work aims to identify trends, challenges, and inform future recommendations and policies based on the findings. The dataset includes various files that detail the methodology, data collected, and analyses performed.

 

Repository Contents:





Methods and Analysis Report - Data Sharing Practices in the MRC CMHN.pdf



This report provides the methodologies used for selecting and assessing research papers within the network, along with detailed results, tables, and discussions from the evaluation.





CMHN_All_Data.xlsx



An Excel workbook containing:



Sheet 1: All data and variables collected and analysed for this project.

Sheet 2: A README file that explains each variable and its values.







CMHN DataType Scoring.xlsx



An Excel workbook detailing:



Sheet 1: All datatypes, both code and datasets, evaluated in this study.

Sheet 2: A README explaining the variables evaluated and their specific values.







CMHN Data Extraction Survey.pdf



A copy of the Microsoft Form used to systematically evaluate data-sharing practices from selected publications, describing the structured data extraction process used.





CMHN DataType Scoring Survey.pdf



A Microsoft Form used to assess the types of data (code and datasets) shared.





Data_CSV_Code.csv



This file is the original, uncleaned dataset directly extracted from the initial response data of the Microsoft Form used in the project. It served as the primary dataset for all subsequent data analysis and code execution within the study.





CMHN Code.Rmd



An R Markdown file containing the code used for data analysis; predominantly descriptive statistics due to the limited number of papers with shared data.




Recommended Use: For comparative purposes or further analysis, researchers are encouraged to utilise the cleaned datasets available in "CMHN_All_Data.xlsx" and "CMHN DataType Scoring.xlsx."Contact: For further inquiries, please email us at bio_rdm@ed.ac.uk.
DOI: 10.6084/m9.figshare.26954710
title: Characteristics of included studies

description: Characteristics of included studies
DOI: 10.5281/zenodo.11174074
title: Data underlying figures in "Turning on the emission from isolated GFP chromophore anions at cryogenic temperatures"
DOI: 10.5281/zenodo.11174075
title: Data underlying figures in "Turning on the emission from isolated GFP chromophore anions at cryogenic temperatures"
DOI: 10.5281/zenodo.13710978
title: Data underlying figures in "Turning on the emission from isolated GFP chromophore anions at cryogenic temperatures"
DOI: 10.34740/kaggle/dsv/9332899
title: e-IPO Indonesia Data - Investment
DOI: 10.5517/ccdc.csd.cc2ckyqm
title: CCDC 2192001: Experimental Crystal Structure Determination

description: Related Article: Adedibu C. Tella, Sunday J. Olatunji, Peter A. Ajibade|2024|RSC Advances|14|25759|doi:10.1039/D4RA03678F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.wwf3dg
title: Occurrence Download

description: A dataset containing 259 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Material sample, Specimen, Fossil, Living Specimen)",
 "Country is Belgium",
 "TaxonKey is Felis silvestris Schreber, 1777"
 ]
}

 The dataset includes 259 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000012-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yc5mw3
title: Occurrence Download

description: A dataset containing 3663 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Issue is one of (Zero coordinate, Coordinate out of range, Coordinate invalid, Coordinate rounded, Geodetic datum invalid, Geodetic datum assumed WGS84, Coordinate reprojected, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate accuracy invalid, Coordinate precision invalid, Coordinate uncertainty meters invalid, Coordinate precision/uncertainty mismatch, Footprint SRS invalid, Footprint WKT mismatch, Footprint WKT invalid, Country coordinate mismatch, Country mismatch, Country invalid, Country derived from coordinates, Continent coordinate mismatch, Continent country mismatch, Continent invalid, Continent derived from country, Continent derived from coordinates, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Recorded date mismatch, Recorded date invalid, Recorded date unlikely, Taxon match fuzzy, Taxon match higher rank, Taxon match aggregate, The scientific name ID was not used in backbone matching, The taxon concept ID was not used in backbone matching, The taxon ID was not used in backbone matching, The scientific name ID was not found in the checklist, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, The scientific name differs on the record from that found in the checklist, Taxon match none, The backbone match found using the taxon IDs differs from what would be found if using the scientific names , Depth not metric, Depth unlikely, Depth min max swapped, Depth non numeric, Elevation unlikely, Elevation min max swapped, Elevation not metric, Elevation non numeric, Modified date invalid, Modified date unlikely, Identified date unlikely, Identified date invalid, Basis of record invalid, Type status invalid, Multimedia date invalid, Multimedia URI invalid, References URI invalid, Error during interpretation, Individual count invalid, Individual count conflicts with occurrence status, Occurrence status unparsable, Occurrence status inferred from individual count, ccurrence status inferred from basis of record, Georeferenced date unlikely, Georeferenced date invalid, Ambiguous institution, Ambiguous collection, Institution match none, Collection match none, Institution match fuzzy, Collection match fuzzy, Institution collection mismatch, Possibly on loan, Different owner institution)",
 "OccurrenceStatus is Present",
 "TaxonKey is Sloanea guianensis (Aubl.) Benth."
 ]
}

 The dataset includes 3663 records from 209 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000013-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.93rudb
title: Occurrence Download

description: A dataset containing 209056 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helleborus foetidus L."
 ]
}

 The dataset includes 209056 records from 1116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000011-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2umjsb
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sciodaphyllum rodolfoi Lowry, G.M.Plunkett & M.M.Mora"
 ]
}

 The dataset includes 64 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0194265-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8owbs
title: Occurrence Download

description: A dataset containing 1902 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Rhizophoraceae"
 ]
}

 The dataset includes 1902 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003154-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7q93nv
title: Occurrence Download

description: A dataset containing 1997193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "PublishingCountry is United States of America",
 "TaxonKey is Chaetura pelagica (Linnaeus, 1758)"
 ]
}

 The dataset includes 1997193 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060832-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vtygpd
title: Occurrence Download

description: A dataset containing 1127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Aves de San Andrés y Providencia - Expedición Sea Flower Plus 2021"
 ]
}

 The dataset includes 1127 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044077-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s6m894
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Protozoa",
 "DecimalLatitude is greater than 36.5039399164908",
 "DecimalLatitude is less than 37.0593511552172",
 "DecimalLongitude is greater than -104.323806930893",
 "DecimalLongitude is less than -103.622322165264"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007081-180824113759888/datasets/export for details.
DOI: 10.15468/dl.rppjmk
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thalictrum treleasei B.Boivin"
 ]
}

 The dataset includes 6 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0194264-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wtax3
title: Occurrence Download

description: A dataset listing the 5 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leiolepis reevesii (Gray, 1831)"
 ]
}

 The dataset's 5 records were derived from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044036-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h0bhq4
title: Occurrence Download

description: A dataset containing 160763 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Elevation is less than or equal to 500.0m",
 "Year 1960-1990",
 "Geometry POLYGON((-180 9,180 9,180 11,-180 11,-180 9))",
 "HasCoordinate is true",
 "TaxonKey is Tracheophyta",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 160763 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001398-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g1byrg
title: Occurrence Download

description: A dataset containing 297 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON ((-97.03125 25.64152637306577, -99.140625 26.43122806450644, -101.07421875 29.53522956294847, -102.48046875 29.6880527498568, -103.35937499999999 29.075375179558346, -104.4140625 29.53522956294847, -105.29296874999999 30.751277776257812, -106.5234375 31.80289258670676, -108.28125 31.80289258670676, -109.51171875 31.203404950917395, -112.1484375 31.50362930577303, -114.78515624999999 32.39851580247402, -117.42187500000001 32.69486597787505, -114.60937499999999 27.68352808378776, -112.5 25.005972656239187, -110.74218749999999 22.755920681486405, -104.0625 18.812717856407776, -98.4375 14.944784875088372, -94.921875 15.961329081596647, -92.28515625 14.604847155053898, -92.10937499999999 15.623036831528264, -90.703125 16.46769474828897, -91.0546875 17.97873309555617, -89.296875 17.811456088564483, -88.06640625 18.812717856407776, -87.1875 21.12549763660628, -89.82421875 20.96143961409684, -94.5703125 18.145851771694467, -96.50390625 20.138470312451155, -97.20703125 22.105998799750566, -97.03125 25.64152637306577))",
 "HasCoordinate is true",
 "TaxonKey is Tamandua mexicana (Saussure, 1860)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 297 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003154-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dr7cna
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Mamíferos laguna El Tinije"
 ]
}

 The dataset includes 58 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044025-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a9epve
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Protozoa",
 "DecimalLatitude is greater than 34.953128568572",
 "DecimalLatitude is less than 35.5018124441846",
 "DecimalLongitude is greater than -118.895697269295",
 "DecimalLongitude is less than -118.227089914001"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007084-180824113759888/datasets/export for details.
DOI: 10.15468/dl.f4yzpk
title: Occurrence Download

description: A dataset containing 5279 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prunus persica (L.) Batsch"
 ]
}

 The dataset includes 5279 records from 238 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030901-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pa82k2
title: Occurrence Download

description: A dataset containing 373 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cheilotrema saturnum (Girard, 1858)"
 ]
}

 The dataset includes 373 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035185-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.66hvw1
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eucnide cordata (Kellogg) Kellogg ex Curran"
 ]
}

 The dataset includes 129 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003155-150316153013904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f6zk6z
title: Occurrence Download

description: A dataset containing 353 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is IDN.2_1",
 "Year 2021-2021"
 ]
}

 The dataset includes 353 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078000-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yefffd
title: Occurrence Download

description: A dataset containing 5875 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Veronica fruticans Jacq.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5875 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003155-150410134957023/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jwrjat
title: Occurrence Download

description: A dataset containing 3862 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Fauna y flora del municipio de Lipa, Arauca"
 ]
}

 The dataset includes 3862 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044042-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y3jbpd
title: Occurrence Download

description: A dataset containing 238 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macrovipera Reuss, 1927"
 ]
}

 The dataset includes 238 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021109-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bt1z97
title: Occurrence Download

description: A dataset containing 978 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Petrosaurus thalassinus (Cope, 1863)"
 ]
}

 The dataset includes 978 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003155-150422101436696/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kf9sdw
title: Occurrence Download

description: A dataset containing 8096 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Ecuador",
 "Geometry POLYGON((-77.93984 0.15356,-78.69012 -0.42124,-78.18792 -0.48175,-78.16372 -0.32444,-78.32103 -0.17922,-77.93984 0.15356))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2013-2023"
 ]
}

 The dataset includes 8096 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005928-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wr02ib
title: Occurrence Download

description: A dataset containing 7455 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Year 1980-2019",
 "Geometry POLYGON((35.7249999652143 -4.27500000971424,37.7833332985384 -4.27500000971424,37.7833332985384 -2.20000000972658,35.7249999652143 -2.20000000972658,35.7249999652143 -4.27500000971424))",
 "HasCoordinate is true",
 "TaxonKey is Tracheophyta",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7455 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013577-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.liimme
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Palisota pedicellata K.Schum."
 ]
}

 The dataset includes 24 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003155-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pntd6b
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Hormigas de hojarasca asociadas a fragmentos de bosque y cafetales de la zona cafetera de Cundinamarca"
 ]
}

 The dataset includes 171 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044045-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gqnnkl
title: Occurrence Download

description: A dataset containing 271 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Karwinskia mollis Schltdl.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 271 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018229-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.osznci
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paralabrax auroguttatus Walford, 1936"
 ]
}

 The dataset includes 73 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003155-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u92n3p
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is On the validity and taxonomicstatus of Crypturellus obsoletus griseiventris (Salvadori 1895) and C. o. hypochraceus (Miranda-Ribeiro, 1938) (Aves, Tinamidae)"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044050-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frofj1
title: Occurrence Download

description: A dataset containing 13040 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-80.2776 43.34051,-80.28632 43.33599,-80.2829 43.33439,-80.27108 43.33521,-80.26729 43.33654,-80.26658 43.33679,-80.26821 43.33923,-80.27448 43.33837,-80.2776 43.34051))",
 "Year 2010-2019"
 ]
}

 The dataset includes 13040 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018230-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tfvgd5
title: Occurrence Download

description: A dataset containing 128656 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is San Diego Natural History Museum Entomology Department"
 ]
}

 The dataset includes 128656 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044031-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.