cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3557820
title: Appendix G. Generalized linear model for postfire Douglas-fir seedling density.

description: Generalized linear model for postfire Douglas-fir seedling density.
DOI: 10.6084/m9.figshare.3557820.v1
title: Appendix G. Generalized linear model for postfire Douglas-fir seedling density.

description: Generalized linear model for postfire Douglas-fir seedling density.
DOI: 10.6084/m9.figshare.3557817
title: Appendix A. Location and habitat description of the study populations.

description: Location and habitat description of the study populations.
DOI: 10.6084/m9.figshare.3557817.v1
title: Appendix A. Location and habitat description of the study populations.

description: Location and habitat description of the study populations.
DOI: 10.6084/m9.figshare.3557814
title: Appendix B. Detailed description of the methods.

description: Detailed description of the methods.
DOI: 10.6084/m9.figshare.3557814.v1
title: Appendix B. Detailed description of the methods.

description: Detailed description of the methods.
DOI: 10.6084/m9.figshare.3557811
title: Appendix C. Proportion of high-performance genotypes in each population.

description: Proportion of high-performance genotypes in each population.
DOI: 10.6084/m9.figshare.3557811.v1
title: Appendix C. Proportion of high-performance genotypes in each population.

description: Proportion of high-performance genotypes in each population.
DOI: 10.6084/m9.figshare.3557808
title: Appendix D. ANOVA results testing for the effects of performance group and genotype within each treatment on seedling traits, fitness traits, and functional traits.

description: ANOVA results testing for the effects of performance group and genotype within each treatment on seedling traits, fitness traits, and functional traits.
DOI: 10.6084/m9.figshare.3557808.v1
title: Appendix D. ANOVA results testing for the effects of performance group and genotype within each treatment on seedling traits, fitness traits, and functional traits.

description: ANOVA results testing for the effects of performance group and genotype within each treatment on seedling traits, fitness traits, and functional traits.
DOI: 10.6084/m9.figshare.3557805
title: Appendix E. Performance of Asian genotypes in a high-light, moist environment.

description: Performance of Asian genotypes in a high-light, moist environment.
DOI: 10.6084/m9.figshare.3557805.v1
title: Appendix E. Performance of Asian genotypes in a high-light, moist environment.

description: Performance of Asian genotypes in a high-light, moist environment.
DOI: 10.6084/m9.figshare.3557802
title: Appendix A. Examples of the variability in community and individual plant attributes in Emas National Park, central Brazil.

description: Examples of the variability in community and individual plant attributes in Emas National Park, central Brazil.
DOI: 10.6084/m9.figshare.3557802.v1
title: Appendix A. Examples of the variability in community and individual plant attributes in Emas National Park, central Brazil.

description: Examples of the variability in community and individual plant attributes in Emas National Park, central Brazil.
DOI: 10.6084/m9.figshare.3557799
title: Appendix B. Detailed description of field and laboratory methods.

description: Detailed description of field and laboratory methods.
DOI: 10.6084/m9.figshare.3557799.v1
title: Appendix B. Detailed description of field and laboratory methods.

description: Detailed description of field and laboratory methods.
DOI: 10.6084/m9.figshare.3557796
title: Appendix C. Relationship between the community closure index (CCI) and basal area per hectare.

description: Relationship between the community closure index (CCI) and basal area per hectare.
DOI: 10.6084/m9.figshare.3557796.v1
title: Appendix C. Relationship between the community closure index (CCI) and basal area per hectare.

description: Relationship between the community closure index (CCI) and basal area per hectare.
DOI: 10.6084/m9.figshare.3557793
title: Appendix D. Soil variables, leaf toughness and diversity indices along the community closure index gradient (CCI) and their breakpoints.

description: Soil variables, leaf toughness and diversity indices along the community closure index gradient (CCI) and their breakpoints.
DOI: 10.6084/m9.figshare.3557790
title: Appendix E. Distribution of basal area and mean height at each side of the threshold.

description: Distribution of basal area and mean height at each side of the threshold.
DOI: 10.6084/m9.figshare.3557790.v1
title: Appendix E. Distribution of basal area and mean height at each side of the threshold.

description: Distribution of basal area and mean height at each side of the threshold.
DOI: 10.6084/m9.figshare.3557787
title: Appendix A. Supplementary photos of the studied bat roosts and a figure showing the experimental design.

description: Supplementary photos of the studied bat roosts and a figure showing the experimental design.
DOI: 10.6084/m9.figshare.3557787.v1
title: Appendix A. Supplementary photos of the studied bat roosts and a figure showing the experimental design.

description: Supplementary photos of the studied bat roosts and a figure showing the experimental design.
DOI: 10.6084/m9.figshare.3557781
title: Appendix B. Supplementary information on the local herbivore community and model selection procedures.

description: Supplementary information on the local herbivore community and model selection procedures.
DOI: 10.6084/m9.figshare.3557781.v1
title: Appendix B. Supplementary information on the local herbivore community and model selection procedures.

description: Supplementary information on the local herbivore community and model selection procedures.
DOI: 10.6084/m9.figshare.3557778
title: Appendix C. Supplementary tables of the results from the generalized linear mixed models and Piper species sampled.

description: Supplementary tables of the results from the generalized linear mixed models and Piper species sampled.
DOI: 10.6084/m9.figshare.3557778.v1
title: Appendix C. Supplementary tables of the results from the generalized linear mixed models and Piper species sampled.

description: Supplementary tables of the results from the generalized linear mixed models and Piper species sampled.
DOI: 10.6084/m9.figshare.3557775
title: Appendix D. Supplementary information on non-Piper species diversity and canopy openness across the four plot treatments.

description: Supplementary information on non-Piper species diversity and canopy openness across the four plot treatments.
DOI: 10.6084/m9.figshare.3557775.v1
title: Appendix D. Supplementary information on non-Piper species diversity and canopy openness across the four plot treatments.

description: Supplementary information on non-Piper species diversity and canopy openness across the four plot treatments.
DOI: 10.6084/m9.figshare.3557772
title: Appendix A. Details of soil variables included in our analysis.

description: Details of soil variables included in our analysis.
DOI: 10.6084/m9.figshare.3557772.v1
title: Appendix A. Details of soil variables included in our analysis.

description: Details of soil variables included in our analysis.
DOI: 10.6084/m9.figshare.3557769
title: Appendix B. A detailed introduction to the Cox process model.

description: A detailed introduction to the Cox process model.
DOI: 10.6084/m9.figshare.3557766
title: Appendix C. Simulation studies on the performance of the given Cox process model.

description: Simulation studies on the performance of the given Cox process model.
DOI: 10.6084/m9.figshare.3557766.v1
title: Appendix C. Simulation studies on the performance of the given Cox process model.

description: Simulation studies on the performance of the given Cox process model.
DOI: 10.6084/m9.figshare.3557763
title: Appendix D. Performance and the estimated parameters of the best-fit model for each species in the three plots.

description: Performance and the estimated parameters of the best-fit model for each species in the three plots.
DOI: 10.6084/m9.figshare.3557763.v1
title: Appendix D. Performance and the estimated parameters of the best-fit model for each species in the three plots.

description: Performance and the estimated parameters of the best-fit model for each species in the three plots.
DOI: 10.6084/m9.figshare.3557760
title: Supplement 1. R functions for estimating parameters of the Cox process, model selections, and calculating percentage of variances explained by habitat heterogeneity and other clustering processes.

description: File List Spatial_variance_decomposition.r (MD5: 20310c761f123be5bbd329bb1d698e33) Description Spatial_variance_decomposition.r contains R code for estimating parameters of the Cox process, model selections and calculating percentage of variances explained by habitat heterogeneity and other clustering processes. The code may be called from an R program as an external function, or it may be placed in-line within a R program. The single entice function is variance Decomposite.
DOI: 10.6084/m9.figshare.3557760.v1
title: Supplement 1. R functions for estimating parameters of the Cox process, model selections, and calculating percentage of variances explained by habitat heterogeneity and other clustering processes.

description: File List Spatial_variance_decomposition.r (MD5: 20310c761f123be5bbd329bb1d698e33) Description Spatial_variance_decomposition.r contains R code for estimating parameters of the Cox process, model selections and calculating percentage of variances explained by habitat heterogeneity and other clustering processes. The code may be called from an R program as an external function, or it may be placed in-line within a R program. The single entice function is variance Decomposite.
DOI: 10.6084/m9.figshare.3557757
title: Appendix A. Detailed description of methods for obtaining palm species distribution and richness patterns.

description: Detailed description of methods for obtaining palm species distribution and richness patterns.
DOI: 10.6084/m9.figshare.3557757.v1
title: Appendix A. Detailed description of methods for obtaining palm species distribution and richness patterns.

description: Detailed description of methods for obtaining palm species distribution and richness patterns.
DOI: 10.6084/m9.figshare.3557754
title: Appendix B. Additional data processing and statistical analyses of palm species richness patterns.

description: Additional data processing and statistical analyses of palm species richness patterns.
DOI: 10.6084/m9.figshare.3557754.v1
title: Appendix B. Additional data processing and statistical analyses of palm species richness patterns.

description: Additional data processing and statistical analyses of palm species richness patterns.
DOI: 10.6084/m9.figshare.3557751
title: Appendix C. Latitudinal species richness patterns of African palms.

description: Latitudinal species richness patterns of African palms.
DOI: 10.6084/m9.figshare.3557751.v1
title: Appendix C. Latitudinal species richness patterns of African palms.

description: Latitudinal species richness patterns of African palms.
DOI: 10.6084/m9.figshare.3557748
title: Appendix A. Demonstration that the conditional trial-swap algorithm is unbiased.

description: Demonstration that the conditional trial-swap algorithm is unbiased.
DOI: 10.6084/m9.figshare.3557748.v1
title: Appendix A. Demonstration that the conditional trial-swap algorithm is unbiased.

description: Demonstration that the conditional trial-swap algorithm is unbiased.
DOI: 10.6084/m9.figshare.3557745
title: Appendix B. Detailed description of analytical algorithms.

description: Detailed description of analytical algorithms.
DOI: 10.6084/m9.figshare.3557742
title: Appendix C. Observed and expected range overlap of exclusive congeneric and within-guild pairs.

description: Observed and expected range overlap of exclusive congeneric and within-guild pairs.
DOI: 10.6084/m9.figshare.3557742.v1
title: Appendix C. Observed and expected range overlap of exclusive congeneric and within-guild pairs.

description: Observed and expected range overlap of exclusive congeneric and within-guild pairs.
DOI: 10.6084/m9.figshare.3557739
title: Appendix D. Observed numbers of TCC, TPC, and significance tests.

description: Observed numbers of TCC, TPC, and significance tests.
DOI: 10.6084/m9.figshare.3557739.v1
title: Appendix D. Observed numbers of TCC, TPC, and significance tests.

description: Observed numbers of TCC, TPC, and significance tests.
DOI: 10.6084/m9.figshare.3557736
title: Appendix E. Congeneric and within-guild pairs of species identified as true complete checkerboards (TCC) or true partial checkerboards.

description: Congeneric and within-guild pairs of species identified as true complete checkerboards (TCC) or true partial checkerboards.
DOI: 10.6084/m9.figshare.3557736.v1
title: Appendix E. Congeneric and within-guild pairs of species identified as true complete checkerboards (TCC) or true partial checkerboards.

description: Congeneric and within-guild pairs of species identified as true complete checkerboards (TCC) or true partial checkerboards.
DOI: 10.6084/m9.figshare.3557733
title: Appendix F. Color versions of manuscript Figs. 2–4.

description: Color versions of manuscript Figs. 2–4.
DOI: 10.6084/m9.figshare.3557730
title: Supplement 1. Data on species incidences, island group membership, and coordinates of island perimeters.

description: File List bismarcks-islands.csv (MD5: 85146e9d4760445ca261e985f44d75c7) bismarcks-species-matrix.csv (MD5: 68d0b38c7c352c5575cbbc12ae80088f) nhbirds-islands.csv (MD5: adfeffb8b2367698c71a79df58a7e282) nhbirds-species-matrix.csv (MD5: cbc955403bb8d17d81c123a3c7a59c6a) solomons-islands.csv (MD5: dc09dfb69d2674dd790c6947944921c8) solomons-species-matrix.csv (MD5: 5605bc6505efabdd98c4b77816723e6d) Description bismarcks-islands.csv - A data file for the Bismarck islands with island names and associations in columns B–G, coordinates of island perimeters in columns Y–BV, and coordinates of approximate island mid-points in column CA–CB. Column pairs give latitude and longitude in decimal degrees. bismarcks-species-matrix.csv - A data file for the Bismarck islands with species names in column A, species and genus codes in columns E–F, guild membership in column G–H, and guild codes in columns H–I. The species incidence matrix is in columns J–AX (rows 2–151). Island abbreviations in row 1 (columns J–AX), and the island group code for each island in row 153 (columns J–AX). The island group memberships for each species are found in columns AZ–BC (rows 2–151). nhbirds-islands.csv - A data file for Vanuatu with island names in column A, the coordinates of the approximate mid-points of each island in columns B–C, and the coordinates of the island perimeters in columns E–AN. Each pair of columns gives the latitude and longitude of a coordinate in decimal degrees. nhbirds-species-matrix.csv - A data file for Vanuatu with species, genus, and family names in columns A–C. Columns D–G contain the family code, genus code, multi-species genus code, and guild codes of each species. Columns H–AI gives the species incidence matrix. solomons-islands.csv - A data file for the Solomon Islands with island number in column A, island abbreviation in column B, island name in column C, the coordinates of the approximate mid-points of each island in columns AU–AV, and the coordinates of the island perimeters in columns D–AS. Each pair of columns gives the latitude and longitude of a coordinate in decimal degrees. solomons-species-matrix.csv - A data file for the Solomon Islands with species, genus, family names, and codes in columns A–J, and guild codes in columns K–M. Columns The species incidence matrix is in columns O–EZ (rows 2–142). Island abbreviations in row 1 (columns O–EZ), and the island group code for each island in row 144 (columns O–EZ). The island group memberships for each species are found in columns FB-FG (rows 2–142).
DOI: 10.6084/m9.figshare.3557730.v1
title: Supplement 1. Data on species incidences, island group membership, and coordinates of island perimeters.

description: File List bismarcks-islands.csv (MD5: 85146e9d4760445ca261e985f44d75c7) bismarcks-species-matrix.csv (MD5: 68d0b38c7c352c5575cbbc12ae80088f) nhbirds-islands.csv (MD5: adfeffb8b2367698c71a79df58a7e282) nhbirds-species-matrix.csv (MD5: cbc955403bb8d17d81c123a3c7a59c6a) solomons-islands.csv (MD5: dc09dfb69d2674dd790c6947944921c8) solomons-species-matrix.csv (MD5: 5605bc6505efabdd98c4b77816723e6d) Description bismarcks-islands.csv - A data file for the Bismarck islands with island names and associations in columns B–G, coordinates of island perimeters in columns Y–BV, and coordinates of approximate island mid-points in column CA–CB. Column pairs give latitude and longitude in decimal degrees. bismarcks-species-matrix.csv - A data file for the Bismarck islands with species names in column A, species and genus codes in columns E–F, guild membership in column G–H, and guild codes in columns H–I. The species incidence matrix is in columns J–AX (rows 2–151). Island abbreviations in row 1 (columns J–AX), and the island group code for each island in row 153 (columns J–AX). The island group memberships for each species are found in columns AZ–BC (rows 2–151). nhbirds-islands.csv - A data file for Vanuatu with island names in column A, the coordinates of the approximate mid-points of each island in columns B–C, and the coordinates of the island perimeters in columns E–AN. Each pair of columns gives the latitude and longitude of a coordinate in decimal degrees. nhbirds-species-matrix.csv - A data file for Vanuatu with species, genus, and family names in columns A–C. Columns D–G contain the family code, genus code, multi-species genus code, and guild codes of each species. Columns H–AI gives the species incidence matrix. solomons-islands.csv - A data file for the Solomon Islands with island number in column A, island abbreviation in column B, island name in column C, the coordinates of the approximate mid-points of each island in columns AU–AV, and the coordinates of the island perimeters in columns D–AS. Each pair of columns gives the latitude and longitude of a coordinate in decimal degrees. solomons-species-matrix.csv - A data file for the Solomon Islands with species, genus, family names, and codes in columns A–J, and guild codes in columns K–M. Columns The species incidence matrix is in columns O–EZ (rows 2–142). Island abbreviations in row 1 (columns O–EZ), and the island group code for each island in row 144 (columns O–EZ). The island group memberships for each species are found in columns FB-FG (rows 2–142).
DOI: 10.6084/m9.figshare.3557724
title: Appendix A. An example of calculation of the null models for the functional-diversity–area relationship.

description: An example of calculation of the null models for the functional-diversity–area relationship.
DOI: 10.6084/m9.figshare.3557724.v1
title: Appendix A. An example of calculation of the null models for the functional-diversity–area relationship.

description: An example of calculation of the null models for the functional-diversity–area relationship.
DOI: 10.6084/m9.figshare.3557721
title: Appendix B. Testing the null models for the functional-diversity–area relationship.

description: Testing the null models for the functional-diversity–area relationship.
DOI: 10.6084/m9.figshare.3557721.v1
title: Appendix B. Testing the null models for the functional-diversity–area relationship.

description: Testing the null models for the functional-diversity–area relationship.
DOI: 10.6084/m9.figshare.3557718
title: Appendix C. Map of the region used to create the mammalian body size FAR.

description: Map of the region used to create the mammalian body size FAR.
DOI: 10.6084/m9.figshare.3557718.v1
title: Appendix C. Map of the region used to create the mammalian body size FAR.

description: Map of the region used to create the mammalian body size FAR.
DOI: 10.6084/m9.figshare.3557715
title: Supplement 1. R scripts for trait-level model (TLM) and species-trait-level model (STLM) tests for nonrandom patterns in the functional-diversity–area relationship.

description: File List R scripts for calculating FAR null models.r (MD5: 023dab61d9ade8305be9f11f88cd8753)Description R scripts for calculating FAR null models.r contains R scripts for implementing trait-level null model tests (TLM) and species-trait-level null model tests (STLM). Comment lines specify input and its format. The code can be copied and pasted into the R command line interface or called using the source() function. Results are plotted.
DOI: 10.6084/m9.figshare.3557712
title: Supplement 2. R scripts for simulating and testing functional-diversity–area relationships of communities with known levels of biotic sorting and abiotic filtering.

description: File List R scripts for simulating communities with known levels of sorting or filtering.r (MD5: ba675c8f1030d23a5309ad532d646d26)Description R scripts for simulating communities with known levels of sorting or filtering.r contains an R script for simulating communities with user-specified levels of biotic sorting and/or environmental filtering and testing the output with the trait-level (TLM) and species-trail–level (STLM) models. The script is useful for determining the power of the null model tests. Comment lines specify input and its format . The code can be copied and pasted into the R command line interface or called using the source() function. Results are plotted and output as CSV files. The format of the CSV files is explained in the comments.
DOI: 10.6073/pasta/eb094c43ecd8c2c99bbeda0605f67fd3
title: Mangrove Litterfall from the Shark River Slough and Taylor Slough, Everglades National Park (FCE), South Florida from January 2001 to Present

description: Monthly litterfall data is being collected in two mangrove-dominated regions (Shark River and Taylor Slough) in South Florida. Three sites (SRS4, SRS5, SRS6) in the Shark River region and one site (TS/Ph8) in the Joe Bay area region were used to characterize patterns of litterfall production. At each mangrove site 10 litter baskets (0.5 x 0.5 m) were placed in two 20 x 20 m plots (five baskets per plot). Data have been collected since January 2001. Statistical analysis is being performed.
DOI: 10.6084/m9.figshare.3557709
title: Supplement 1. R code for analysis of simulated data.

description: File List Rcode_simulations.r (MD5: 6b104d150c5a84507fc200044b4e4a61) Description Rcode_simulations.r contains R code for recreating the simulated data set and performing various steps of SCR on the example data.
DOI: 10.6084/m9.figshare.3557709.v1
title: Supplement 1. R code for analysis of simulated data.

description: File List Rcode_simulations.r (MD5: 6b104d150c5a84507fc200044b4e4a61) Description Rcode_simulations.r contains R code for recreating the simulated data set and performing various steps of SCR on the example data.
DOI: 10.6084/m9.figshare.3557706
title: Supplement 2. R code for analysis of oribatid mite data.

description: File List Rcode_oribatid.r (MD5: cff114d383995cbea34bf4acd232f463)Description Rcode_oribatid.r contains R code for analysis of the oribatid mite data with SCR.
DOI: 10.6084/m9.figshare.3557706.v1
title: Supplement 2. R code for analysis of oribatid mite data.

description: File List Rcode_oribatid.r (MD5: cff114d383995cbea34bf4acd232f463)Description Rcode_oribatid.r contains R code for analysis of the oribatid mite data with SCR.
DOI: 10.6084/m9.figshare.3557703
title: Appendix A. Detailed methods.

description: Detailed methods.
DOI: 10.6084/m9.figshare.3557703.v1
title: Appendix A. Detailed methods.

description: Detailed methods.
DOI: 10.6084/m9.figshare.3557700
title: Appendix B. Juvenile survivorship and genetic discrimination using microsatellites for the six Daphnia pulicaria genotypes used in the experiments.

description: Juvenile survivorship and genetic discrimination using microsatellites for the six Daphnia pulicaria genotypes used in the experiments.