cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3518777.v1
title: Appendix A. Technical description of the Kalman filter and likelihood.

description: Technical description of the Kalman filter and likelihood.
DOI: 10.6084/m9.figshare.3518774
title: Appendix B. Data table of rookeries used in pup production estimation.

description: Data table of rookeries used in pup production estimation.
DOI: 10.6084/m9.figshare.3518774.v1
title: Appendix B. Data table of rookeries used in pup production estimation.

description: Data table of rookeries used in pup production estimation.
DOI: 10.6084/m9.figshare.3518771
title: Appendix A. Important dates for carryover effects experiments.

description: Important dates for carryover effects experiments.
DOI: 10.6084/m9.figshare.3518771.v1
title: Appendix A. Important dates for carryover effects experiments.

description: Important dates for carryover effects experiments.
DOI: 10.6084/m9.figshare.3518768
title: Appendix B. Pearson’s product-moment correlation coefficients between metamorphic parameters.

description: Pearson’s product-moment correlation coefficients between metamorphic parameters.
DOI: 10.6084/m9.figshare.3518768.v1
title: Appendix B. Pearson’s product-moment correlation coefficients between metamorphic parameters.

description: Pearson’s product-moment correlation coefficients between metamorphic parameters.
DOI: 10.6084/m9.figshare.3518765
title: Appendix C. Number of individuals placed in terrestrial mesocosms from each aquatic treatment.

description: Number of individuals placed in terrestrial mesocosms from each aquatic treatment.
DOI: 10.6084/m9.figshare.3518765.v1
title: Appendix C. Number of individuals placed in terrestrial mesocosms from each aquatic treatment.

description: Number of individuals placed in terrestrial mesocosms from each aquatic treatment.
DOI: 10.6084/m9.figshare.3518762
title: Appendix D. Model ranking of detection probability (p) models for wood frogs within Cormack-Jolly-Seber mark–recapture models.

description: Model ranking of detection probability (p) models for wood frogs within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518759
title: Appendix E. Model ranking of detection probability (p) models for American toads within Cormack-Jolly-Seber mark–recapture models.

description: Model ranking of detection probability (p) models for American toads within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518759.v1
title: Appendix E. Model ranking of detection probability (p) models for American toads within Cormack-Jolly-Seber mark–recapture models.

description: Model ranking of detection probability (p) models for American toads within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518756
title: Appendix F. Model ranking of detection probability (p) models for southern leopard frogs within Cormack-Jolly-Seber mark–recapture models.

description: Model ranking of detection probability (p) models for southern leopard frogs within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518756.v1
title: Appendix F. Model ranking of detection probability (p) models for southern leopard frogs within Cormack-Jolly-Seber mark–recapture models.

description: Model ranking of detection probability (p) models for southern leopard frogs within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518753
title: Appendix G. Goodness-of-fit tests (p values reported) and estimated value of ĉ for survival models.

description: Goodness-of-fit tests (p values reported) and estimated value of ĉ for survival models.
DOI: 10.6084/m9.figshare.3518753.v1
title: Appendix G. Goodness-of-fit tests (p values reported) and estimated value of ĉ for survival models.

description: Goodness-of-fit tests (p values reported) and estimated value of ĉ for survival models.
DOI: 10.6084/m9.figshare.3518750
title: Appendix H. Full AICc tables for wood frog survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.

description: Full AICc tables for wood frog survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518750.v1
title: Appendix H. Full AICc tables for wood frog survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.

description: Full AICc tables for wood frog survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518747
title: Appendix I. Full AICc tables for American toad survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.

description: Full AICc tables for American toad survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518747.v1
title: Appendix I. Full AICc tables for American toad survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.

description: Full AICc tables for American toad survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518744
title: Appendix J. Full QAICc tables for southern leopard frog survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.

description: Full QAICc tables for southern leopard frog survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518744.v1
title: Appendix J. Full QAICc tables for southern leopard frog survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.

description: Full QAICc tables for southern leopard frog survival (φ) modeled within Cormack-Jolly-Seber mark–recapture models.
DOI: 10.6084/m9.figshare.3518741
title: Supplement 1. Code to compute the habitat connectivity index for upstream passage (HCIU) for the analyses presented.

description: File List PassageNetwork_Code_2013-01-23.txt (MD5: e871e22831e144932522c05fd7efab08) Description Computational code used in analyses to compute fish passage connectivity via the metric described in the paper (i.e., the habitat connectivity index for upstream passage, HCIU). All code is provided in the R computational language. Comment lines specify the inputs and outputs of the model. The code may be called from an R program.
DOI: 10.6084/m9.figshare.3518741.v1
title: Supplement 1. Code to compute the habitat connectivity index for upstream passage (HCIU) for the analyses presented.

description: File List PassageNetwork_Code_2013-01-23.txt (MD5: e871e22831e144932522c05fd7efab08) Description Computational code used in analyses to compute fish passage connectivity via the metric described in the paper (i.e., the habitat connectivity index for upstream passage, HCIU). All code is provided in the R computational language. Comment lines specify the inputs and outputs of the model. The code may be called from an R program.
DOI: 10.6084/m9.figshare.3518738
title: Appendix A. Seven component PARAFAC model loadings and split-half validation.

description: Seven component PARAFAC model loadings and split-half validation.
DOI: 10.6084/m9.figshare.3518735
title: Appendix A. Photos of seminatural grasslands around paddy terraces.

description: Photos of seminatural grasslands around paddy terraces.
DOI: 10.6084/m9.figshare.3518735.v1
title: Appendix A. Photos of seminatural grasslands around paddy terraces.

description: Photos of seminatural grasslands around paddy terraces.
DOI: 10.6084/m9.figshare.3518732
title: Appendix B. Map of study paddy terraces.

description: Map of study paddy terraces.
DOI: 10.6084/m9.figshare.3518732.v1
title: Appendix B. Map of study paddy terraces.

description: Map of study paddy terraces.
DOI: 10.6084/m9.figshare.3518729
title: Appendix C. A list of vascular plants in 129 plots in autumn 2008.

description: A list of vascular plants in 129 plots in autumn 2008.
DOI: 10.6084/m9.figshare.3518729.v1
title: Appendix C. A list of vascular plants in 129 plots in autumn 2008.

description: A list of vascular plants in 129 plots in autumn 2008.
DOI: 10.6084/m9.figshare.3518726
title: Appendix D. Relationship between plot position within paddy terraces and environmental variables.

description: Relationship between plot position within paddy terraces and environmental variables.
DOI: 10.6084/m9.figshare.3518726.v1
title: Appendix D. Relationship between plot position within paddy terraces and environmental variables.

description: Relationship between plot position within paddy terraces and environmental variables.
DOI: 10.6084/m9.figshare.3518723
title: Appendix E. Relationships between aboveground biomass and two environmental variables.

description: Relationships between aboveground biomass and two environmental variables.
DOI: 10.6084/m9.figshare.3518723.v1
title: Appendix E. Relationships between aboveground biomass and two environmental variables.

description: Relationships between aboveground biomass and two environmental variables.
DOI: 10.6084/m9.figshare.3518720
title: Appendix F. Relationships between soil water content and species and rare species richness.

description: Relationships between soil water content and species and rare species richness.
DOI: 10.6084/m9.figshare.3518720.v1
title: Appendix F. Relationships between soil water content and species and rare species richness.

description: Relationships between soil water content and species and rare species richness.
DOI: 10.6084/m9.figshare.3518717
title: Appendix G. Relationships between aboveground biomass and species and between rare species richness and nitrogen concentration.

description: Relationships between aboveground biomass and species and between rare species richness and nitrogen concentration.
DOI: 10.6084/m9.figshare.3518717.v1
title: Appendix G. Relationships between aboveground biomass and species and between rare species richness and nitrogen concentration.

description: Relationships between aboveground biomass and species and between rare species richness and nitrogen concentration.
DOI: 10.6084/m9.figshare.3518714
title: Appendix A. Vegetation census at all study sites.

description: Vegetation census at all study sites.
DOI: 10.6084/m9.figshare.3518714.v1
title: Appendix A. Vegetation census at all study sites.

description: Vegetation census at all study sites.
DOI: 10.6084/m9.figshare.3518711
title: Appendix B. Soil C:N ratios at each physical fraction in surface and deep layers.

description: Soil C:N ratios at each physical fraction in surface and deep layers.
DOI: 10.6084/m9.figshare.3518711.v1
title: Appendix B. Soil C:N ratios at each physical fraction in surface and deep layers.

description: Soil C:N ratios at each physical fraction in surface and deep layers.
DOI: 10.6084/m9.figshare.3518708
title: Appendix C. Average C:P ratios in soil profiles.

description: Average C:P ratios in soil profiles.
DOI: 10.6084/m9.figshare.3518708.v1
title: Appendix C. Average C:P ratios in soil profiles.

description: Average C:P ratios in soil profiles.
DOI: 10.6084/m9.figshare.3518705
title: Appendix D. Average δ15N in invasive grass leaves across sites.

description: Average δ15N in invasive grass leaves across sites.
DOI: 10.6084/m9.figshare.3518705.v1
title: Appendix D. Average δ15N in invasive grass leaves across sites.

description: Average δ15N in invasive grass leaves across sites.
DOI: 10.6084/m9.figshare.3518702
title: Appendix A. Stream physicochemical characteristics for study reaches in the Columbus Metropolitan Area, Ohio, USA.

description: Stream physicochemical characteristics for study reaches in the Columbus Metropolitan Area, Ohio, USA.
DOI: 10.6084/m9.figshare.3518702.v1
title: Appendix A. Stream physicochemical characteristics for study reaches in the Columbus Metropolitan Area, Ohio, USA.

description: Stream physicochemical characteristics for study reaches in the Columbus Metropolitan Area, Ohio, USA.
DOI: 10.6084/m9.figshare.3518699
title: Appendix B. Tables presenting stream benthic invertebrate monitoring data and precipitation and climate data for the Columbus, Ohio, USA, study area.

description: Tables presenting stream benthic invertebrate monitoring data and precipitation and climate data for the Columbus, Ohio, USA, study area.
DOI: 10.6084/m9.figshare.3518699.v1
title: Appendix B. Tables presenting stream benthic invertebrate monitoring data and precipitation and climate data for the Columbus, Ohio, USA, study area.

description: Tables presenting stream benthic invertebrate monitoring data and precipitation and climate data for the Columbus, Ohio, USA, study area.
DOI: 10.6084/m9.figshare.3518696
title: Appendix C. Tables presenting aquatic insect families captured in emergent traps and terrestrial arthropod families captured in pan traps.

description: Tables presenting aquatic insect families captured in emergent traps and terrestrial arthropod families captured in pan traps.
DOI: 10.6084/m9.figshare.3518696.v1
title: Appendix C. Tables presenting aquatic insect families captured in emergent traps and terrestrial arthropod families captured in pan traps.

description: Tables presenting aquatic insect families captured in emergent traps and terrestrial arthropod families captured in pan traps.
DOI: 10.6084/m9.figshare.3518693
title: Appendix D. Summary statistics of invertebrate responses for Columbus, Ohio, study reaches.

description: Summary statistics of invertebrate responses for Columbus, Ohio, study reaches.
DOI: 10.6084/m9.figshare.3518693.v1
title: Appendix D. Summary statistics of invertebrate responses for Columbus, Ohio, study reaches.

description: Summary statistics of invertebrate responses for Columbus, Ohio, study reaches.
DOI: 10.6084/m9.figshare.3518690
title: Appendix A. Oribatid mite species present in this study and their species scores from nMDS analysis.

description: Oribatid mite species present in this study and their species scores from nMDS analysis.
DOI: 10.6084/m9.figshare.3518684
title: Appendix B. Figures for microbial phospholipid fatty acids (PLFAs) outside the litterbags.

description: Figures for microbial phospholipid fatty acids (PLFAs) outside the litterbags.
DOI: 10.6084/m9.figshare.3518684.v1
title: Appendix B. Figures for microbial phospholipid fatty acids (PLFAs) outside the litterbags.

description: Figures for microbial phospholipid fatty acids (PLFAs) outside the litterbags.
DOI: 10.6084/m9.figshare.3518681
title: Appendix A. List of understory vascular plant species by seral status.

description: List of understory vascular plant species by seral status.
DOI: 10.6084/m9.figshare.3518678
title: Appendix B. Detailed description of nonmetric multidimensional scaling analysis: methods and results.

description: Detailed description of nonmetric multidimensional scaling analysis: methods and results.
DOI: 10.6084/m9.figshare.3518678.v1
title: Appendix B. Detailed description of nonmetric multidimensional scaling analysis: methods and results.

description: Detailed description of nonmetric multidimensional scaling analysis: methods and results.
DOI: 10.6084/m9.figshare.3518675
title: Appendix C. Figure depicting the relationships of climate variables to statistical composites used in structural equation models.

description: Figure depicting the relationships of climate variables to statistical composites used in structural equation models.
DOI: 10.6084/m9.figshare.3518675.v1
title: Appendix C. Figure depicting the relationships of climate variables to statistical composites used in structural equation models.

description: Figure depicting the relationships of climate variables to statistical composites used in structural equation models.
DOI: 10.6084/m9.figshare.3518672
title: Appendix A. Number of trees and plots in each compartment, and number and length of time intervals.

description: Number of trees and plots in each compartment, and number and length of time intervals.
DOI: 10.6084/m9.figshare.3518672.v1
title: Appendix A. Number of trees and plots in each compartment, and number and length of time intervals.

description: Number of trees and plots in each compartment, and number and length of time intervals.
DOI: 10.6084/m9.figshare.3518669
title: Appendix B. Measurement methods and auditing of explanatory variables (tree size, basal area, insolation, elevation, slope, annual water deficit, and soil type).

description: Measurement methods and auditing of explanatory variables (tree size, basal area, insolation, elevation, slope, annual water deficit, and soil type).
DOI: 10.6084/m9.figshare.3518669.v1
title: Appendix B. Measurement methods and auditing of explanatory variables (tree size, basal area, insolation, elevation, slope, annual water deficit, and soil type).

description: Measurement methods and auditing of explanatory variables (tree size, basal area, insolation, elevation, slope, annual water deficit, and soil type).
DOI: 10.6084/m9.figshare.3518666
title: Appendix C. Additional details on statistical model and algebra regarding standardization of explanatory variables.

description: Additional details on statistical model and algebra regarding standardization of explanatory variables.
DOI: 10.6084/m9.figshare.3518666.v1
title: Appendix C. Additional details on statistical model and algebra regarding standardization of explanatory variables.

description: Additional details on statistical model and algebra regarding standardization of explanatory variables.
DOI: 10.6084/m9.figshare.3518663
title: Appendix D. Details on model estimation and the evaluation of model results.

description: Details on model estimation and the evaluation of model results.
DOI: 10.6084/m9.figshare.3518663.v1
title: Appendix D. Details on model estimation and the evaluation of model results.

description: Details on model estimation and the evaluation of model results.
DOI: 10.6084/m9.figshare.3518660
title: Appendix E. Table of parameter estimates.

description: Table of parameter estimates.
DOI: 10.6084/m9.figshare.3518660.v1
title: Appendix E. Table of parameter estimates.

description: Table of parameter estimates.
DOI: 10.6084/m9.figshare.3518657
title: Appendix F. Latent unmeasured sizes for nine trees.

description: Latent unmeasured sizes for nine trees.
DOI: 10.6084/m9.figshare.3518657.v1
title: Appendix F. Latent unmeasured sizes for nine trees.

description: Latent unmeasured sizes for nine trees.
DOI: 10.6084/m9.figshare.3518654
title: Appendix G. Examples of simpler models.

description: Examples of simpler models.
DOI: 10.6084/m9.figshare.3518654.v1
title: Appendix G. Examples of simpler models.

description: Examples of simpler models.
DOI: 10.6084/m9.figshare.3518651
title: Appendix H. Comparison of conditions at BFRS with FHA data from a similar latitude.

description: Comparison of conditions at BFRS with FHA data from a similar latitude.
DOI: 10.6084/m9.figshare.3518651.v1
title: Appendix H. Comparison of conditions at BFRS with FHA data from a similar latitude.

description: Comparison of conditions at BFRS with FHA data from a similar latitude.
DOI: 10.6084/m9.figshare.3518648
title: Supplement 1. BUGS model code for full model.

description: File List WhiteFirBUGSModel.txt (MD5: f7c238534f45c8cb363482a385d7f078) Description This Supplement includes the BUGS specification of the model. When using OpenBUGS or WinBUGS, open this file, go to the menu “Model&gt;Specification” and when the Specification Tool appears, click “Check Model.” If the code works, the program displays in the status bar at the bottom of the window “Model is syntactically correct.”
DOI: 10.6084/m9.figshare.3518648.v1
title: Supplement 1. BUGS model code for full model.

description: File List WhiteFirBUGSModel.txt (MD5: f7c238534f45c8cb363482a385d7f078) Description This Supplement includes the BUGS specification of the model. When using OpenBUGS or WinBUGS, open this file, go to the menu “Model&gt;Specification” and when the Specification Tool appears, click “Check Model.” If the code works, the program displays in the status bar at the bottom of the window “Model is syntactically correct.”
DOI: 10.6084/m9.figshare.3518645
title: Supplement 2. BUGS-formatted Abies concolor data suitable for running full model.

description: File List WhiteFirData.txt (MD5: 78e4b781b4ae15f159fcb038360d4c84) Description This Supplement includes the data for white fir used in the article. The data is arranged in the right way for BUGS to use it to run the full model in the first supplement. After checking the model, open this data file, and then click “Load Data” in the same dialog box as before. BUGS should display the message “Data Loaded.” Then click “Compile” - this could take some time on some systems. But if it works, BUGS displays “Model Compiled.”
DOI: 10.6084/m9.figshare.3518645.v1
title: Supplement 2. BUGS-formatted Abies concolor data suitable for running full model.

description: File List WhiteFirData.txt (MD5: 78e4b781b4ae15f159fcb038360d4c84) Description This Supplement includes the data for white fir used in the article. The data is arranged in the right way for BUGS to use it to run the full model in the first supplement. After checking the model, open this data file, and then click “Load Data” in the same dialog box as before. BUGS should display the message “Data Loaded.” Then click “Compile” - this could take some time on some systems. But if it works, BUGS displays “Model Compiled.”
DOI: 10.6084/m9.figshare.3518639
title: Supplement 3. Inital values for full model.

description: File List WhiteFirInits.txt (MD5: 886cd1c1629a7ff0f2f042d5630b44ba) Description This Supplement includes initial values for all the parts of the model that need estimating, including the latent (unmeasured) tree sizes. Once the model is compiled, open the this file and click “Load Inits.” BUGS should display “Model is Initialized.” It is possible for BUGS to generate initial values for you using your priors, but because the priors specified in the first file are uninformative, they could be quite large or small and due to the complexity of the model the Markov chains might not converge. Therefore we recommend using these initial values to start with. Once you have loaded all these files, you can open the menu “Inference&gt;Samples” and enter the names of the variables you want to track estimates for in to the Sample Monitor Tool. Then return to the “Model” menu and choose “Update.” When the Update Tool appears, specify the number of updates and click “update.” It may take a lot of updates to get good posteriors for this model! BUGS has a help system should you have any troubles.
DOI: 10.6084/m9.figshare.3518639.v1
title: Supplement 3. Inital values for full model.

description: File List WhiteFirInits.txt (MD5: 886cd1c1629a7ff0f2f042d5630b44ba) Description This Supplement includes initial values for all the parts of the model that need estimating, including the latent (unmeasured) tree sizes. Once the model is compiled, open the this file and click “Load Inits.” BUGS should display “Model is Initialized.” It is possible for BUGS to generate initial values for you using your priors, but because the priors specified in the first file are uninformative, they could be quite large or small and due to the complexity of the model the Markov chains might not converge. Therefore we recommend using these initial values to start with. Once you have loaded all these files, you can open the menu “Inference&gt;Samples” and enter the names of the variables you want to track estimates for in to the Sample Monitor Tool. Then return to the “Model” menu and choose “Update.” When the Update Tool appears, specify the number of updates and click “update.” It may take a lot of updates to get good posteriors for this model! BUGS has a help system should you have any troubles.
DOI: 10.6084/m9.figshare.3518636
title: Appendix A. A description of unpublished neural network models of native vegetation and habitat variables.

description: A description of unpublished neural network models of native vegetation and habitat variables.
DOI: 10.6084/m9.figshare.3518636.v1
title: Appendix A. A description of unpublished neural network models of native vegetation and habitat variables.

description: A description of unpublished neural network models of native vegetation and habitat variables.