cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15138/g35k54
title: Airccraft Campaign Data over the Northeastern Marcellus Shale, May-June 2015

description: These data were collected aboard a NOAA Twin Otter aircraft based in Williamsport, Pennsylvania in May and June of 2015. Research flights covered the Marcellus Shale region in northeastern Pennsylvania. This dataset is comprised of continuous measurements of CH4, CO2, CH4, H2O mole fractions from a Picarro cavity ring-down spectromer operated by the NOAA ESRL group, and C2H6 mole fractions from an Aerodyne laser absorption spectromoter operated by the University of Michigan group. Other paramters reported in this dataset are GPS location, course over ground, ground elevation, wind speed and direction, and ambient temperature, pressure and relative humidity. All measurements are given to the nearest 1-second. More information about the overall project goals and findings can be found at: http://sites.psu.edu/marcellus/, http://www.netl.doe.gov/research/oil-and-gas/project-summaries/natural-gas-resources/fe0013590-PSU
DOI: 10.6084/m9.figshare.18661667
title: Germ Defence - Overall Dataset

description: Final behavioural dataset collected from the Germ Defence project, during the entirety of the project (8 April 2020 - 6 Jan 2022).<br>The data is encrypted and can be accessed by contacting the research team.
DOI: 10.25919/thdy-3f16
title: Parkes pulsar observations with undefined project IDs for 2021OCTS_07

description: Parkes pulsar observations with undefined project IDs for 2021OCTS. This collection contains observations from project ID PX071.
DOI: 10.5281/zenodo.5874701
title: Unsupervised Blink Detection Using Eye Aspect Ratio Values

description: This datastore supports an open-source blink detection software which acts as both an implementation of methods proposed in the (unpublished) paper "Unsupervised Blink Detection Using Eye Aspect Ratio Values" and a validation of the results provided. The software can be accessed at the <strong>GitHub repository</strong>: https://github.com/mi3nts/tobiiBlinkDetection Although the study results can be displayed readily from the files provided at the GitHub, this datastore contains the required resources to apply the proposed blink detection algorithm to new data. Simply download this file and replace the resources folder of the cloned repository.
DOI: 10.5281/zenodo.5874700
title: Unsupervised Blink Detection Using Eye Aspect Ratio Values

description: This datastore supports an open-source blink detection software which acts as both an implementation of methods proposed in the (unpublished) paper "Unsupervised Blink Detection Using Eye Aspect Ratio Values" and a validation of the results provided. The software can be accessed at the <strong>GitHub repository</strong>: https://github.com/mi3nts/tobiiBlinkDetection Although the study results can be displayed readily from the files provided at the GitHub, this datastore contains the required resources to apply the proposed blink detection algorithm to new data. Simply download this file and replace the resources folder of the cloned repository.
DOI: 10.7284/145889
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise FK210922 using a Hawaii UHDAS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145890
title: Expendable Probe data collected during research cruise FK210922 using a Turo Quoll instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145891
title: Fluorometer data collected during research cruise FK210922 using a WET Labs ECO-FLNTU instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145892
title: GNSS (Global Navigation Satellite System) data collected during research cruise FK210922 using a C&C C-Nav 3050 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145893
title: Gyrocompass data collected during research cruise FK210922 using a Raytheon STD 22 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145885
title: INS (Inertial Navigation System) data collected during research cruise FK210922 using a Applanix POS/MV-320 V5 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145888
title: INS (Inertial Navigation System) data collected during research cruise FK210922 using a Applanix POS/MV-320 V5 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145894
title: INS (Inertial Navigation System) data collected during research cruise FK210922 using a Kongsberg Seapath 320 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145895
title: Magnetometer data collected during research cruise FK210922 using a Marine Magnetics SeaSPY2 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145886
title: Meteorological Station data collected during research cruise FK210922 using a Gill MetPak Pro instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145887
title: Meteorological Station data collected during research cruise FK210922 using a Gill MetPak Pro instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145896
title: Meteorological Station data collected during research cruise FK210922 using a Gill MetPak Pro instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145882
title: Multibeam Echosounder data collected during research cruise FK210922 using a Kongsberg EM710 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145897
title: Multibeam Echosounder data collected during research cruise FK210922 using a Kongsberg EM302 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145898
title: Multibeam Echosounder data collected during research cruise FK210922 using a Kongsberg EM710 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145901
title: Multibeam Echosounder data collected during research cruise FK210922 using a Kongsberg EM302 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145883
title: pH data collected during research cruise FK210922 using a SUNBURST SAMI-pH instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145884
title: Speedlog data collected during research cruise FK210922 using a SKIPPER EML244 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145899
title: SSV (Sound Speed Velocimeter) data collected during research cruise FK210922 using a Valeport MiniSVS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/145900
title: TSG (Thermosalinograph) data collected during research cruise FK210922 using a Sea-Bird SBE-45 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.20383/102.0480
title: Secondary Geomorphic Processes and their Influence on Alluvial Fan Morphology, Channel Behaviour and Flood Hazards

description: Alluvial fans form through primary and secondary geomorphic processes. Primary processes comprise major geomorphic events that build the fan by transporting sediment from the watershed to the fan; these events occur at decadal time scales. Secondary processes include the smaller flood events which recruit little sediment from the watershed but can re-mobilize and rework sediment already delivered to the fan. We conducted experiments to study the effects of secondary events on alluvial fan behaviour and morphology. We conducted four experiments, in which alluvial fans were built by alternating between primary events, with high flows and high sediment supply, and secondary events, with moderate flows and no sediment supply. In our experiments, primary events are best described as debris floods and secondary events correspond to smaller floods with much lower sediment concentrations. The duration of the secondary events varied between experiments, but the number and duration of the primary events was held constant keeping the total volume of sediment delivered to the fan the same. We monitored fan gradient, area, channel patterns and avulsions.
DOI: 10.17632/wrpp9m5hn3.1
title: Supplementary Table I. Summary of demographic, clinical, and treatment characteristics green nail syndrome cases reported in the literature. 

description: Green nail syndrome (GNS) is a nail disorder usually associated to Pseudomonas aeruginosa infection. We aimed to systematically review the clinical presentation, associations, and treatment of GNS. The attached document contains a table with patients' characteristics from a literature search of this disease.
DOI: 10.17632/gnyrym4mv4.3
title: Code & data — Further improvement of bending performance for conditioning covariance matrices

description: A Jupyter Notebook (.ipynb) and its corresponding R Markdown (.rmd) and HTML (.html) files are provided. It provides the code to reproduce and analyze the data, and the results. Different bending procedures are compared based on the modification of eigenvalues. An updated bending procedure is presented, in which not only the eigenvalues smaller than a small positive value (Ɛ) are changed to Ɛ, but the smallest eigenvalue greater than Ɛ is gradually reduced as long as the bending performance is improved (reduced average absolute deviation between the upper triangle elements of the original matrix and the bent matrix).
DOI: 10.17632/rhwjnp8tzh.1
title: Geochronological and geochemical data of the Liaoji granites and coeval mafic rocks

description: The data show the geochronological and genchemical characteristics of bulk rock and zircon of the Paleoproterozoic Liaoji granites and coeval mafic rocks within the Jiao-Liao-Ji belt, revealing that the Liaoji granites and coeval mafic rocks are attributed to a back-arc basin setting.
DOI: 10.17632/mjhhw3zdwv.1
title: Dataset for "Content-based image retrieval for the diagnosis of myocardial perfusion imaging using deep convolutional autoencoder"

description: Minimal dataset to reproduce our study results. Python codes used in the study are included.
We showed that deep convolutional autoencoder can extract clinical information from myocardial perfusion imaging.
DOI: 10.17632/mwgkz8yxz5.1
title: Random Samples of Investigation Depth Variation Analysis 

description: This data set is related to the PhD Research of RMM Pradeep, General Sir John Kotelawala Defence UIniversity, Rathmalana, Sri Lanka. The original data were collected through an in-depth analysis of component integrations.  Further, this data set was used to analyse the sample size effect on the investigation depths of different integrations between components of the hydroGISmodel development framework. The first page of the document contains the final outcome of the data analysis and the second page shows how to reproduce the data set. The rest of the pages shows random samples utilised.
DOI: 10.17632/94w8tfp972.1
title: The molecular phylogenetic position of Mariplanella piscadera sp. nov. reveals a new major group of rhabdocoel flatworms: Mariplanellida status novus (Platyhelminthes: Rhabdocoela)

description: Rhabdocoels comprise a large group of flatworms that currently consists of two major subgroups: (1) Kalyptorhynchia with an anterior proboscis and (2) Dalytyphloplanida without a proboscis. Most genera of rhabdocoels can easily be classified into one of these two subgroups, except for the three monotypic representatives of the Mariplanellinae. Comparative morphological data and previous molecular phylogenetic analyses have so far been unable to determine the positions of these rarely encountered microturbellarians within the context of rhabdocoels. Here we describe a new species of Mariplanellinae, Mariplanella piscadera sp. nov. from Curaçao (Dutch Caribbean), and present an updated phylogeny inferred from 18S and 28S rDNA sequences, including data from M. piscadera sp. nov., M. frisia, and a selection of rhabdocoels, proseriates and other trepaxonematan flatworms. Our molecular phylogenetic trees reveal that Mariplanella belongs to a distinct higher-level group of rhabdocoels that forms the sister lineage to a clade uniting Kalyptorhynchia and Dalytyphloplanida. Therefore, we update the status of Mariplanellinae to Mariplanellida status novus, containing the family Mariplanellidae status novus, in order to better reflect our current understanding of rhabdocoel phylogeny and the establishment of now three major subgroups.
DOI: 10.17632/bsdc4jmhwm.2
title: Endothelial Shp2 deficiency controls alternative activation of macrophage preventing radiation-induced lung injury through Notch signaling

description: Our findings demonstrate that endothelial Shp2 is a key regulator in radiation-induced lung injury by maintaining the radiation-induced Jag1 level through the β-catenin pathway, thereby reducing alternative macrophage activation to relieve radiation-induced lung injury. Two short-term and a long-term mouse model were used to evaluate the role of endothelial Shp2 in radiation-induced lung injury. The in vitro co-culture system was used to investigate the relationship between irradiated-endothelium and macrophage. HUVECs and MLECs were used here for in vitro study.
DOI: 10.17632/y334dzzrgw.1
title: Data for: The Role of Working Memory in Unfamiliar Word Processing  across Proficiency Levels: Evidence from Eye Movements

description: Participants’ eye movements were recorded using an EyeLink 1000 plus desk-mounted eye-tracking camera (SR Research, Osgoode, Ontario, Canada).  Here, the data of total reading time, first fixation duration, gaze duration, and number of fixations were used to obtain a comprehensive picture of target words processing.
DOI: 10.17632/ht4h95h7cm.1
title: Physical attraction measured by use of a body figure scale in an age of changing body ideals: An age discriminated sample from a regional Australian city.

description: There is a substantial body of research that uses figure rating scales for personal body image assessment and satisfaction where typically women self-identify as heavier than what they wish to be, and men self-identify as less muscular than what they wish to be. The aim of this research was to determine the difference in attractiveness of physical body image by age of men and women, where it was hypothesised that younger age groups would be more likely to identify more mesomorphic or muscular images as more attractive due to social media images and the “fitspiration” phenomenon. 460 participants who were representative of the population of a major Australian regional city were sampled using face-to-face interviews and made selections using a computer-based survey tool. Although the results of this study did not support the hypothesis, women were found likely to identify thin images of women as more attractive to men; and men were found likely to identify more muscular images of men as more attractive to women. These findings have implications for clinical treatments related to body image, eating disorders, and compulsive exercise.
DOI: 10.17632/2cbws3g2sn.2
title: Effect of anemoside B4 on milk whey in clinical mastitis-affected cows elucidated using tandem mass tag (TMT)-based quantitative proteomics

description: supplement metarial for "Effect of anemoside B4 on milk whey in clinical mastitis-affected cows elucidated using tandem mass tag (TMT)-based quantitative proteomics"
DOI: 10.17632/rvn7h96s2f.1
title: data

description: For a certain part of the data, pictures and tables of this experimental paper
DOI: 10.17632/m3rrb8tpfv.3
title: Theoretical Instance for SCD Model

description: The first and most restrictive setting has two suppliers per part and the total integration for each supplier is limited between 1 and 5. As such, each supplier can source at least one low risk part, and at most five low risk parts, but could also, for example, source a high risk part and a medium risk part. For ensuing artificial instances, the number of suppliers per part was increased in steps of three, and both limits of the risk interval were also increased by three. This would mean a total of sixteen different possible instance settings. For each combination, individual suppliers are assigned a random number to be their total integration risk. To account for the variance of this step, for each setting, five different instances are generated. Figure \ref{fig:feasibleinstances} outlines the parameters for each artificial instance, and the labels used for the results in this Section. For similar reasons to the ones outlined in the previous paragraph, some permutations of these parameters do not yield feasible instances.
DOI: 10.17632/t3p3mdbydv.1
title: Supplemental Figures Acne Adherence

description: Supplemental Figures Acne Adherence
DOI: 10.17632/fy3csfm7kv.1
title: Soil chemical elements and ground-surface hydrothermal conditions

description: Wujiaqu2021_Xray.csv: An Olympus Vanta handheld X-ray fluorescence (XRF) spectrometer was used to monitor the internal and external data at the PPP and collect the soil element concentration data in different positions on the PPP panels, on every 10 rows of panels, and at different orientations inside and outside the PPP. 
Wujiaqu2021_TDR.csv: The temperature and humidity of the soil ground surface layer were monitored using an Acclima Sensor Reader Kit (SDI-12).
DOI: 10.17632/pjf5rdcdf9.1
title: Data for: Comparative Assessment of Outcomes in Drug Treatment for Smoking Cessation and Role of Genetic Polymorphisms of Human Nicotinic Acetylcholine Receptor Subunits

description: The data of this manuscript entitled “Comparative Assessment of Outcomes in Drug Treatment for Smoking Cessation and Role of Genetic Polymorphisms of Human Nicotinic Acetylcholine Receptor Subunits” by Muderrisoglu et. al., 2022 is presented in this file. In the study, the effects of functional genetic polymorphisms of nicotinic acetylcholine receptor subunits on smoking status and success of cessation treatments in a Turkish population of non-smokers and smokers treated with nicotine replacement, bupropion or varenicline were investigated.
DOI: 10.5281/zenodo.5793958
title: Dataset related to article "Multifaceted and age-dependent phenotypes associated with biallelic PNPLA6 gene variants: eight novel cases and review of the literature."

description: Genetic data in VCF format and Sanger electropherograms of an Italian patient with spastic ataxia phenotype
description: Study supported by Italian Ministry of Health to Lorenzo Nanetti CP 20/2018 (Care-4NeuroRare) from Fondazione Regionale per la Ricerca Biomedica (FRRB) to FT
DOI: 10.5281/zenodo.5793957
title: Dataset related to article "Multifaceted and age-dependent phenotypes associated with biallelic PNPLA6 gene variants: eight novel cases and review of the literature."

description: Genetic data in VCF format and Sanger electropherograms of an Italian patient with spastic ataxia phenotype
description: Study supported by Italian Ministry of Health to Lorenzo Nanetti CP 20/2018 (Care-4NeuroRare) from Fondazione Regionale per la Ricerca Biomedica (FRRB) to FT
DOI: 10.17632/wpnpxn9brh.1
title: The interplay between arginine dimethylation and ubiquitylation coordinates TDP1 proteostasis for the repair of topoisomerase I covalent complexes. Bhattacharjee et al

description: SUMMARY

Tyrosyl-DNA phosphodiesterase (TDP1) hydrolyzes the phosphodiester bond between a DNA 3'-end and a tyrosyl moiety and is implicated in the repair of trapped topoisomerase I (Top1)-DNA covalent complexes (Top1cc).  Protein arginine methyltransferase 5 (PRMT5) catalyzes methylation of TDP1 at residues R361 and R586. Here we establish mechanistic crosstalk between TDP1 arginine methylation and ubiquitylation, which is critical for TDP1 homeostasis and cellular responses to Top1 poisons. Using PRMT5 knockout cells, we show that loss of TDP1 arginine methylation results in an imbalance in TDP1 degradation with marked elevation of Top1cc-induced DNA breaks and cell death. We identify that R586 methylation promotes TDP1 ubiquitylation that facilitates ubiquitin/proteasome-dependent TDP1 turnover by impeding the binding of UCHL3 (deubiquitylase enzyme) with TDP1. Intriguingly, R586 dimethylation also enhances TDP1-XRCC1 binding and propagation of the DNA damage response through the recruitment of XRCC1 foci at Top1cc-damage sites. We further show R361 dimethylation enhances the 3'-phosphodiesterase activity of TDP1 in real-time fluorescence-based cleavage assays and this was rationalized using structural modeling. Together, our findings establish arginine methylation as a coregulator of TDP1 proteostasis and activity, which modulates the repair of trapped Top1cc.
DOI: 10.17632/dyy2wxf3kk.1
title: 300 topics in "Exploring the Subject Heterogeneity of Scientific Research Project Funding"

description: We analyze topic distribution is extracted using the LDA topic model. We first build a text corpus based on the titles, abstracts, and keywords of the 115,813 papers through normalization techniques of natural language processing, including word segmentation, stop word removal, and standardized stemming. Then, we use the LDA topic model to extract topics and correspond each of them to several high-frequency words. The perplexity index is used to determine the number of topics--the smaller the perplexity is, the stronger the overall effect of the model. It can be seen from the graph that the perplexity reaches the lowest value when the number of topics is 300. So we choose 300 topics as the reference for the following analysis on topic attributes. The table contains all the  theme-words contained in 300 topics
DOI: 10.17632/ykx6jrpsm3.1
title: Mass spectrometry and proteome analysis to identify SARS-CoV-2 protein from COVID-19 patient swab samples

description: Supplementary Table S4-Host Peptide added. Related to step 5a.
DOI: 10.17632/bpr9dxmg6f.1
title: LDHU3_07.0760

description: ras-related protein rab-14
Leishmania donovani (HU3 strain)
DOI: 10.17632/kfr5bnzrmw.1
title: LDHU3_07.0720

description: mitochondrial ADP/ATP carrier | MCP15
Leishmania donovani (HU3 strain)
DOI: 10.17632/cbhzd8xdsz.1
title: LDHU3_07.0680

description: 60S ribosomal protein L7a | eL8
Leishmania donovani (HU3 strain)
DOI: 10.17632/mpcrw4fn6x.1
title: LDHU3_07.0600

description: TSR1
Leishmania donovani (HU3 strain)