cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/kd64xjfpc2
title: Water Quality Analysis During COVID-19 Lockdown - Remote Sensing Data for Lake Hussain Sagar, India

description: Landsat 8 OLI Satellite Images for Lake Hussain Sagar, India are provided in the folder 'Satellite Images- Clipped- Hussain Sagar Lake Hyderabad India'. Data contains band 1 (B1), band 2 (B2), band 3 (B3), band 4 (B4), and band 5 (B5) for March and April in 2015 - 2019, and January, March, April, and May in 2020. All cloud-free images are used. Surface Reflectance (SR) values extracted for the above-mentioned bands are available in the folder 'Extracted Surface Reflectance Values'. This data is used for water quality analysis during the COVID-19 lockdown. For more details refer to Wagh et. al, 2021 (https://doi.org/10.3390/w13010073).
DOI: 10.6084/m9.figshare.28497692.v1
title: Notes on ants of Astypalaia

description: Supplementary FilesSupplementary File 1. Binary matrix including presence (=1) / absence (=0) data on 13 Aegean islands, including all taxa. Legend: Astypalaea (AST), Crete (CRE), Amorgos (AMO), Milos (MIL), Naxos (NAX), Serifos (SER), Nisyros (NIS), Tilos (TIL), Kalymnos (KAL), Kos (KOS), Karpathos (KAR), Samos (SAM), Rhodes (RHO).Supplementary File 2. Binary matrix including presence (=1) / absence (=0) data on 13 Aegean islands, excluding alien taxa. Legend: Astypalaea (AST), Crete (CRE), Amorgos (AMO), Milos (MIL), Naxos (NAX), Serifos (SER), Nisyros (NIS), Tilos (TIL), Kalymnos (KAL), Kos (KOS), Karpathos (KAR), Samos (SAM), Rhodes (RHO).Supplementary File 3. Binary matrix including presence (=1) / absence (=0) data for all ant species found in Astypalaia (AST), Crete (CRE), Dodecanese (DOD) and Cyclades (CYC).Supplementary File 4. Binary matrix including presence (=1) / absence (=0) data for ants, excluding alien species, found in Astypalaia (AST), Crete (CRE), Dodecanese (DOD) and Cyclades (CYC).Supplementary File 5. Similarity indices for UPGMA dendrographs using the Jaccard similarity index including all known taxa (A), Jaccard similarity index removing alien species (B), Dice-Sørensen similarity index including all known taxa (C) and Dice-Sørensen similarity index removing alien species (D). Legend: Astypalaea (AST), Crete (CRE), Amorgos (AMO), Milos (MIL), Naxos (NAX), Serifos (SER), Nisyros (NIS), Tilos (TIL), Kalymnos (KAL), Kos (KOS), Karpathos (KAR), Samos (SAM), Rhodes (RHO).Supplementary File 6. Similarity indices matrix for UPGMA dendrographs using Jaccard similarity index including all known taxa (A), Jaccard similarity index removing alien species (B), Sorensen similarity index including all known taxa (C) and Dice-Sørensen similarity index removing alien species (D). Legend: Astypalaia (AST), Crete (CRE), Dodecanese (DOD) and Cyclades (CYC).
DOI: 10.17632/bhkdrfd3cr
title: Evaluating the Feasibility of Modular Nuclear Reactors in the European Union: A GIS-based Multicriteria Decision Analysis Approach to Meet Paris Agreement

description: This study identifies all 193 operational coal-fired power plants in the EU and evaluates their suitability for conversion to Small Modular Reactors (SMRs) based on Multi Criteria Decision Making Model (MCDM)
By leveraging ARC GIS software for data collection and the TOPSIS method for ranking, the study prioritizes sites for SMR construction, ensuring the most optimal locations are selected based on various geographical, infrastructure and economic criteria.
Findings suggest that converting the top 70 ranked existing coal plant sites to SMRs with could generate four times the electricity currently produced by all 193 coal plants combined, offering a significant boost to the EU's energy capacity.
The research highlights SMRs as a solution to enhance energy security considering the geopolitical tensions, while also addressing the EU's climate goals by replacing coal with low-carbon nuclear energy, especially given the current challenges with renewable energy development.
DOI: 10.17632/wzcxws83wb
title: Data on growth performance of marine Chlorella sp. cultured in different cost-effective media

description: Data on the growth performance of marine Chlorella sp. cultured in different cost-effective media
DOI: 10.6084/m9.figshare.25234249.v6
title: Benchmarking Density Functional Methods for Accurate Prediction of Ground and Excited State Reduction and Oxidation Potentials of Organic Photoredox Catalysts

description: These folders contain optimized geometries, log files, and predicted properties of nine organic photoredox catalysts, which were benchmarked using 21 density functionals and seven basis sets.
DOI: 10.6084/m9.figshare.25764879.v3
title: Microcontroller based DO control Data

description: This data repository contains dissolved oxygen measurements from experiments during which oxygen was controlled by a microcontroller connected to a FireStingO2 oxygen sensor (PyroScience). R scripts for analysis of DO measurements are supplied to reproduce analyses and DO control systems.See the GitHub repository for further information and the Arduino sketches and library necessary to set up a microcontroller-based oxygen control system: https://github.com/muchaste/ArdoxyFunding for this project was provided by Humboldt-Universität zu Berlin and the NeuroCure Cluster of Excellence to Prof. Rüdiger Krahe
DOI: 10.6084/m9.figshare.28466066
title: Supplementary Information for MR of CpG Methylation and Immune Phenotypes in Epithelial Ovarian Cancer Outcomes.

description: Supplementary Information for Mendelian Randomization Analysis of CpG Methylation and Immune Phenotypes in Epithelial Ovarian Cancer Outcomes.
DOI: 10.6084/m9.figshare.28466066.v1
title: Supplementary Information for MR of CpG Methylation and Immune Phenotypes in Epithelial Ovarian Cancer Outcomes.

description: Supplementary Information for Mendelian Randomization Analysis of CpG Methylation and Immune Phenotypes in Epithelial Ovarian Cancer Outcomes.
DOI: 10.6084/m9.figshare.28596332.v2
title: Video-Based Fall Detection Dataset with 2017 Activities from 29 Subjects

description: This dataset comprises a diverse collection of 2,017 video recordings for fall detection, captured from various subjects. It includes 999 falls and 1,017 Activities of Daily Living (ADL), providing a balanced and realistic representation of real-world scenarios. Fall events cover a range of conditions, including falls to the left, right, front, and back, as well as complex situations such as falling while attempting to sit or from elevated positions. ADL activities include walking, running, standing up from the ground, and other daily movements. This dataset serves as a valuable resource for developing and evaluating advanced video-based fall detection models.
DOI: 10.6084/m9.figshare.6860261.v1
title: ProteomeTools - Prosit fragmentation - Data

description: ProteomeTools HCD data as training, test and holdout dataset for machine learning applications.
DOI: 10.17632/ct626vbjt5
title: Applied tests for the Central American and Caribbean Chemistry Olympiad 2022

description: Several prestigious international competitions, including the Central American and Caribbean Chemistry Olympiad, are intended to promote the study of chemistry and to develop young talents in the field. In Havana, Cuba, the XV Central American and XIII Caribbean Chemistry Olympiad was held between November 14 and 19, 2022. Five countries participated, including Cuba, Honduras, Guatemala, El Salvador, and Panama (as an observer). This dataset presents the exams administered to the students at the event as well as the instructions provided before starting the exam. Ideally, these exams will be used as instruments in research pertaining to the teaching and learning of chemistry.
DOI: 10.17632/ry5t7vjn3p
title: Lobbying, Trade, and Misallocation

description: Replication package for "Lobbying, Trade, and Misallocation"
DOI: 10.17632/yyw6t8r4gx
title: Three Layers of Uncertainty - data and replication codes

description: This readme contains instructions about the datasets and codes necessary to re-produce the results, tables and figures reported in paper entitled “Three Layers of Uncertainty”.
DOI: 10.25452/figshare.plus.28821213.v1
title: Retinal Pigment Epithelium (RPE) Segmentation Stacks

description: This items contains stacks of cell, nuclei, and organelle segmentation. These were combined to facilitate browsing.<b>Dataset description:</b>The dataset contains images of retinal pigment epithelium (RPE) cells derived from 16 isogenic iPSC lines expressing proteins tagged with a fluorophore.<br>Each cell line was seeded in a row of a 96-well plate. For every row: Well numbers 02 to 06 – Cells treated with PGE2 Well numbers 07 to 11 – Cells treated with HPI4<br>Six fields of view were acquired within each well with no tile overlap. They were evenly distributed around the well, and no field of view was placed at the very center of the well or at the edges as these locations may introduce a bias in the cell phenotype.Each cell line was imaged once a week for four weeks (W1-W4)The z-stacks contain three channels: – Cell border segmentation<br> – Nuclear border segmentation<br> – Organelle segmentation<br>Voxel dimension: 0.217 x 0.217 x 0.500 µm (xyz)File name convention:<br>Ex: P1-W2-LAMP1_B02_F001.tif<br>Plate # (1 to 5) - Week # (1 to 6) - Organelle of interest _ Well # (02 to 11) _ Field of view # (001-006)
DOI: 10.6084/m9.figshare.1581981.v1
title: Microbial community succession driven by different nutrients in tailings: effects of different nutrients on microbial community and remediation efficiency of tailing

description: Carbon source and nitrogen source
DOI: 10.6084/m9.figshare.27479808.v1
title: Semi-supervised animal action segmentation: HuGaDB

description: The Human Gait Database (HuGaDB) is a publicly available action segmentation dataset that contains lower limb activities such as walking, running, and sitting for a total of 18 subjects (Chereshnev et al. 2017, AIST). HuGaDB measured movements from six inertial measurement units (IMUs) with a 60 Hz sampling frequency. The IMUs were placed on each individual’s right and left feet, shins, and thighs. Each inertial sensor tracks the acceleration data and gyroscope data on each of the three x,y,z axes. We consider eight behavioral categories: walking, running, going up, going down, sitting, sitting down, standing up, and standing. The original dataset contained four additional behaviors that we excluded from our analysis. Two of those behaviors, “bicycling” and “sitting in car,” were not present in the publicly available dataset. The IMU data for the classes “up by elevator” and “down by elevator” did not seem to contain measurable variability.The dataset contains 517k frames, all of which are labeled.
DOI: 10.6084/m9.figshare.28012565.v1
title: TWSA per day per location

description: Incoming daily TWSA per location, split by international and domestic
DOI: 10.6084/m9.figshare.28261079.v2
title: Accelerating Large-Scale Hydrological Modeling with Stepwise Spatial-Temporal Multimember Parallelization

description: Accelerating Large-Scale Hydrological Modeling with Stepwise Spatial-Temporal Multimember Parallelization<b>Highlights</b><b>:</b>A new stepwise spatial-temporal-multimember domain decomposition method improves high-performance parallel computing for grid-based hydrological modeling Computational units are partitioned into parallel spatial layers and conflict-free temporal indices with independent multimember arrays for ensemble modeling The high parallel efficiency is achieved in river basins with highly imbalanced workloads between channel and overland routing process
DOI: 10.6084/m9.figshare.28321706.v1
title: Supplementary Material for: Association between serum iron store biomarkers and all-cause mortality in Japanese patients undergoing hemodialysis: a nationwide cohort study

description: Introduction
We evaluated the association between iron-related biomarkers—key indicators of iron metabolism and inflammation, and crucial in the management of anemia in patients undergoing hemodialysis—and all-cause mortality. This study aimed to clarify the nuanced relationship between these biomarkers and mortality outcomes, addressing the limitations of traditional cutoff-based analyses.
Methods
We conducted a prospective cohort analysis of patients undergoing dialysis across Japan using data from the Japan Renal Database collected between 2019 and 2020. Patients who had been on dialysis for at least 3 months by the end of 2019 were considered eligible. The associations between iron-related biomarkers and all-cause within 1 year were analyzed using Cox proportional hazards models. The relationship between each biomarker and outcome was illustrated using restricted cubic spline curves, while the combined association of serum ferritin and TSAT with mortality was shown using contour plots.
Results
A total of 215,927 patients were included in the analysis. During the follow-up period, 17,803 (8.24%) deaths were recorded. Contour plots demonstrated increased mortality risk in areas with low ferritin and TSAT levels. Additionally, even in regions with high TSAT levels, there was a trend toward increased mortality risk with increasing ferritin levels. Conversely, in areas with low ferritin levels, there was a trend toward a decreased risk of death.
Conclusions
Our findings highlight the complex interplay between serum ferritin and TSAT levels, emphasizing the limitations of relying on single cutoff values for clinical decision-making. The study underscores the need for individualized approaches to iron management in patients undergoing hemodialysis.
DOI: 10.11583/dtu.19786672.v2
title: DFT energies with TZP basis of the molecules

description: This zip file contains the log files corresponding to the 76 XC energies. The log files contains single point calculations on the geometries of the xyzfiles.zip molecules. The TZP basis was used in combination with the DFT functionals. This item is part of the collection MultiXC-QM9 with DOI: 10.11583/DTU.c.6185986
DOI: 10.17632/43wxw3w8sk
title: Matlab Code of Enhanced Opposition Based Grey Wolf Optimization Algorithm

description: Here, the Matlab code of Enhanced Opposition Based Grey Wolf Optimization Algorithm is shared.
DOI: 10.17632/hkyjg2spxf
title: Data for demand-side management of multiple homes

description: DATA_BASE.csv: contains the base load profile for each home. DATA_BATTERY.csv: contains the battery characteristics for each home, the zero value indicates the non-availability of the battery for this home. DATA_OUTDOOR_TEMP.csv: contains the outdoor temperature for each home at each hour. DATA_PV.csv: contains the photovoltaic power for each home at each hour. DATA_WATER.csv: contains the hot water demand for each home at each hour of the day. DATA_TSA.csv: contains the minimum starting time (MIN_START_TIME), maximum ending time (MAX_END_TIME), preferred starting time (PREFERRED_TIME), the processing time (PROCESSIN_TIME), the rated power for each time-shiftable load (RATED_POWER). DATA_CONFIGURATION.csv: contains the number of homes, number of time slots, the electricity prices from the grid, and the number of time-shiftable loads per home.
DOI: 10.17632/s3j9vpfdff
title: The variation of free amino acids and peptides in yak bone collagen hydrolysates during simulated gastrointestinal digestion and absorption

description: Supplemental materials
DOI: 10.17632/vjwf9vb5cf
title: Data for: 3D imaging of bean seeds: correlations between hilum region structures and hydration kinetics
DOI: 10.17632/wts7c8mmw4
title: Interent Of Things

description: Internet    of    Things    is    network    of    physical    objects    or things embedded with electronics, software, sensors, and network connectivity, enabling objects collect and exchange data. Objects can be sensed and controlled remotely across existing network infrastructure, creating opportunities for more direct integration between the physical world and computer-based systems, and resulting in improved efficiency, accuracy, and economic benefit.
DOI: 10.17632/yhybmfrmgs
title: Detecting Mycobacterium tuberculosis Bacilli from TB Smear Images

description: This dataset is a subset of tuberculosis smear images that Wellgen Medical collected from across Asia to train and validate its smear microscopy automated system. The slides are digitized using a microscopic scanner (Wellgen Medical M-Scan Microscope Advance, a USFDA listing device) and subdivided into images with a resolution of 2448x2048. All positive smear images in the dataset come from sputum slides with culture-proven tuberculosis. Some images are generated from a single slide; not all contain TB bacilli. Only the images with TB bacilli are included in the dataset with the positive label. These bacilli are identified with Wellgen Medical’s AI algorithm and then double-checked by two licensed medical technicians. For more information, please contact service@wellgenmed.com
DOI: 10.6084/m9.figshare.16610068.v1
title: Parametric dependence of polarization reversal effects on the particle pitch angle scattering by EMIC waves

description: Electromagnetic ion cyclotron (EMIC) waves play an important role in the loss of both radiation belt electrons and ring current protons. After EMIC waves are excited near the magnetic equator, they will propagate to high latitudes and suffer a polarization reversal from left-handed to right-handed polarized at the crossover frequency. In this study, to improve the current understanding of the EMIC wave-induced loss of radiation belt electrons and ring current protons, we perform a detailed analysis of the sensitivity of polarization reversal effects to L-shell, electron number density, and wave frequency spectrum. Our results show that polarization reversal contributes significantly to the pitch angle diffusion coefficients at low pitch angles extending to the loss cone angle for various parameter sets. The inclusion of polarization reversal mainly enhances the electron scattering loss at several MeV and weaken the proton scattering loss over a broad energy range from a few keV to 1 MeV. While the increase of electron diffusion coefficients can be up to a factor of 5, the decrease of proton diffusion coefficients can be larger than an order of magnitude. As L-shell or electron density increases, the affected resonant region by polarization reversal for both electrons and protons tends to expand to lower energies, while an increase of peak wave frequency will shift the resonant region to higher energies. Our results confirm the vital importance of including polarization reversal in understanding the EMIC wave-induced scattering loss of radiation belt electrons and ring current protons. <br>
DOI: 10.6084/m9.figshare.19920858.v1
title: An evaluation of farmers’ perception, awareness, and adaptation towards climate change: a study from Punjab province Pakistan

description: ABSTRACT: Globally, all environmental sectors are threatened by climate change, most especially to the food and agriculture sectors. Pakistan is a developing country that is most vulnerable to extreme and harsh climatic conditions, especially in Southeast Asia. Climate change has often adverse effects on Pakistan because it is often affected by severe weather conditions. Although, some studies have reported on farmers’ perceptiveness regarding climate change adaptation and mitigation, there is still insufficient awareness among Pakistanis’ farmers. Key knowledge is very important for farmers to overcome the harsh climatic conditions for harvesting and saving crops. To bridge this gap, this research discovered the awareness level of climate change, weather conditions, and related factors among Pakistani farmers. Through a stratified random sampling technique, 500 structured questionnaires were distributed among the farmers in four districts of Punjab Pakistan for study analysis. The probit model was used to analyze the farmer’s perception regarding climate change, socio-demographic and economic variables. The findings of this research showed that 75% of farmers are aware of climate change. Perception of climate change between farmers was directly associated with agriculture experience, farmers’ age, land ownership status, level of education, information sources, and access to extension. Also, our research showed that farmers’ assessment of adaptive behavior showed that farmers are actively implementing crop diversification, irrigation, and other adaptation strategies. Results of this study will help government agencies and policymakers in Pakistan and other regions to develop sustainable adaptation measures in the framework of climate change.
DOI: 10.6084/m9.figshare.28343258.v1
title: Implications of diets supplemented with modified bird-eye pepper powder on proximate composition, sensory profile and shelf stability of meat of broiler chickens

description: This study investigated the implications of varying quantities and sieve sizes of bird-eye pepper (BeP) on proximate composition, sensory profile and shelf stability of meat of broiler chickens.
DOI: 10.6084/m9.figshare.28771073.v2
title: <b>Single-dose replicon RNA Sudan virus vaccine uniformly protects female guinea pigs from disease</b>

description: The Sudan virus (SUDV) outbreaks in Uganda in 2022 and 2025 created public health concerns in-country and the entire East African region. There are currently no licensed countermeasures against SUDV. We developed a SUDV vaccine candidate based on a nanocarrier (LION<sup>TM</sup>) complexed with an alphavirus-based replicon RNA. Here, we compare the protective efficacy of the LION-SUDV vaccine either encoding the SUDV glycoprotein (GP) alone or in combination with the Ebola virus (EBOV) GP (LION-Combination). A LION-EBOV vaccine which is protective against EBOV was also included to determine the potential for cross-protection against SUDV infection. Single-dose vaccinations were conducted three weeks before challenge with a lethal dose of guinea pig-adapted SUDV using a female guinea pig disease model. We demonstrate 100% survival and protection with the LION-SUDV and the LION-Combination vaccines, while the LION-EBOV vaccine achieved 50% protection. Antigen-specific humoral responses correlate with decreased virus replication and survival. This result warrants further studies in larger animal species to ensure that protective efficacy is maintained with the single-dose LION-SUDV vaccine.
DOI: 10.17632/75k76546ms
title: Clinically Applicable Deep Learning Framework for Measuring the Extent of Hair Loss in Patients with Alopecia Areata

description: A companion code and data repository for the article, "Clinically Applicable Deep Learning Framework for Measuring the Extent of Hair Loss in Patients with Alopecia Areata". Along with the programs in the “/Program/” directory, a total of 2716 pixelwise annotations used to train the hair loss identifier (mask), and the hair loss identifier (target) can be find in the “/Data/” directory. However, please note that patients’ clinical photographs cannot be made publicly available because of strict privacy regulations.
DOI: 10.17632/8zdxdbscnf
title: Krewer et al., 2024 - Controls on the termination of Cretaceous Oceanic Anoxic Event 2 in the Tarfaya Basin, Morocco

description: Data repository for Krewer et al., 2024 - 'Controls on the termination of Cretaceous Oceanic Anoxic Event 2 in the Tarfaya Basin, Morocco'
Accepted for publication in American Journal of Science.