cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.gs7k6/8
title: CloneFlwFreq

description: SampleNo – original sample number. Popn – population code. Lat – latitude in degrees N. Long – longitude in degrees W. Genotype. Label – clone ID. Clone.Sex. Num.Ramets.Flw - number of ramets associated with multilocus genotype observed flowering (in field). Num.Ramets - number of ramets associated with multilocus genotype. Num.Ramets.NonFlw - number of ramets associated with multilocus genotype not observed flowering (in field). (The following are same as above but NA for genotypes associated with single ramet). Num.Ramets.Flw.1. Num.Ramets.NonFlw.1. Ppn.Ramets.Flw.1. Num.Ramets – number of ramets associated with multilocus genotype. Num.Ramets.Flw – number of ramets associated with multilocus genotype observed flowering (in field)	. Num.Ramets.NonFlw- number of ramets associated with multilocus genotype not observed flowering (in field). Ppn.Ramets.Flw – proportion of ramets associatied with multilocus genotype observed flowering (in field)
DOI: 10.5061/dryad.gs7k6/9
title: CloneSize_byClone_GenoDive_flwfreq
DOI: 10.5061/dryad.j4923/1
title: Dryad - Complex effects of inbreeding on biparenatal cooperation

description: Microsoft Excel file containing data collected in a laboratory experiment at the University of Edinburgh. For an explanation of short hand column titles a read me file is attached.
DOI: 10.5061/dryad.k3r47/1
title: AntibioticProphylaxisDataDryad

description: De-identified Core data set from trial
DOI: 10.5061/dryad.p6n9s/1
title: Ancillary Datasets S1 and S2 Quilter et al. FASEB J 2014

description: Sample analysis was carried out using the Methylation Module of the Illumina Genome Studio software for Ancillary Datasets: S1: results have a cut off values of ± 10% delta beta at a P value &lt; 0.001 equivalent to a DiffScore of &gt;30 or 30 or
DOI: 10.5061/dryad.tb4k5/1
title: Env_Data_PONE-D-13-50148_081514

description: This dataset in csv format consists of all environmental data (moving average mean temperature, moving average standard deviation of temperature, 24-hr mean relative humidity, 4-hr lag black carbon) linked to each unique participant and date of examination visit used in the analysis. This dataset is sorted by participant ID and date of examination visit.
DOI: 10.5061/dryad.vm62n/1
title: Experiment 1, Attractive and unattractive phantoms

description: The data shows which feeders (A or B) were visited by individual trained vees.
DOI: 10.5061/dryad.vm62n/2
title: Experiment 2 dataset DRYAD

description: Dataset shows bee visits to feeders. The first tab shows data from binary trials (option 1 versus option 2), and the other tabs show data from ternary trials in which the option-1 and option-2 similar phantoms are included
DOI: 10.7925/drs1.ucdlib_32243
title: 7 St Andrew Street, Dublin

description: Consists of 2 orthorectified images of the structure. The orthorectified images have been derived from one or more photographic image that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and other image layers have been extracted and saved in TIFF image files, as well as JPEG files in various resolutions to facilitate inspection.
description: Brickwork structure, 4 levels above ground.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32247
title: St. Andrew's Street 8

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 4 levels above ground.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32250
title: St. Andrew Street, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Stone structure, constructed 1866.
description: Dublin City Council, Record of Protected Structures (2010), no. 7563
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32253
title: 19-24 St. Andrew Street, Dublin 2, Ireland

description: Consists of 14 orthorectified images of the structure. The orthorectified images have been derived from one or more photographic image that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and other image layers have been extracted and saved in TIFF image files, as well as JPEG files in various resolutions to facilitate inspection.
description: Blockwork structure, 4 levels above ground.
description: Dublin City Council, Record of Protected Structures (2010), no. 7569
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32269
title: 17 St Andrew Street, Dublin

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 4 levels above ground.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32272
title: 18 St Andrew Street, Dublin

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 4 levels above ground.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32275
title: 1 Saint Stephen's Green North, Dublin

description: Consists of 2 orthorectified images of the structure. The orthorectified images have been derived from one or more photographic image that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and other image layers have been extracted and saved in TIFF image files, as well as JPEG files in various resolutions to facilitate inspection.
description: Brickwork structure, 4 levels above ground.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32279
title: 2 Saint Stephen's Green North, Dublin

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 4 levels above ground.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32282
title: 3 St. Stephen's Green North, Dublin 2, Ireland

description: Consists of 2 orthorectified images of the structure. The orthorectified images have been derived from one or more photographic image that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and other image layers have been extracted and saved in TIFF image files, as well as JPEG files in various resolutions to facilitate inspection.
description: Brickwork structure, 4 levels above ground.
description: Dublin City Council, Record of Protected Structures (2010), no. 7762
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32286
title: 4 St. Stephen's Green North, Dublin 2, Ireland

description: Consists of 2 orthorectified images of the structure. The orthorectified images have been derived from one or more photographic image that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and other image layers have been extracted and saved in TIFF image files, as well as JPEG files in various resolutions to facilitate inspection.
description: Brickwork structure, 4 levels above ground, constructed 1820.
description: Dublin City Council, Record of Protected Structures (2010), no. 7763
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.5061/dryad.063h8/1
title: All data for manuscript

description: The spreadsheet includes 1) all the raw data used to analyze the effects of cockroach strain, diet & sugar on growth, Fat mass, N body mass, N feces mass, N mass, and survival; 2) the residuals used in subsequent analyses; 3) data used for analyses of reciprocally crossed wild type x glucose averse hybrids
DOI: 10.5061/dryad.1546n/1
title: GeneraSpecificMolecularMarkers

description: The Haloarcula, Halorubrum and Haloferax genera contain seven, fourteen, and fifteen sequenced members respectively. Genes that are unique, universal to the genus, and single-copy in these genera may serve as good molecular markers for metagenomic analyses. We include a list of the homology clusters as well as the protein translations, multiple alignments and a hidden Markov model for each proposed molecular marker.
DOI: 10.5061/dryad.1546n/2
title: Supplementary_Code_1_MySQL_database_mining

description: Scripts for accessing haloarchaeal genomic data in a navigable SQL database. A copy of the database file is available upon request.
DOI: 10.5061/dryad.1546n/3
title: Supplementary_Dataset_5_All_pI_histograms
DOI: 10.5061/dryad.1546n/4
title: Supplementary_Dataset_6_Abnormal_GC_regions
DOI: 10.5061/dryad.1546n/5
title: Supplementary_Dataset_6_All_GC_plots
DOI: 10.5061/dryad.175cv/1
title: Map Parare

description: This ZIP-file contains all data shapefiles as well as ArcGIS 9.3 & 10 MXD-files and the ArcPAD APM-file that were used to create the maps from this publication.
DOI: 10.5061/dryad.3723p/11
title: Data_Fig4_and_SFig3_Mouse_Part1

description: Raw data used to produce Figure 4 and Figure S3 (Mouse dataset part 1)
DOI: 10.5061/dryad.3723p/12
title: Data_Fig4_and_SFig3_Mouse_Part2

description: Raw data used to produce Figure 4 and Figure S3 (Mouse dataset part 2)
DOI: 10.5061/dryad.3723p/13
title: Data_Fig4_and_SFig3_Mouse_Part3

description: Raw data used to produce Figure 4 and Figure S3 (Mouse dataset part 3)
DOI: 10.5061/dryad.3723p/14
title: Data_Fig4_and_SFig3_Mouse_Part4

description: Raw data used to produce Figure 4 and Figure S3 (Mouse dataset part 4)
DOI: 10.5061/dryad.758d0/1
title: Genotypes_Dryad
DOI: 10.5061/dryad.758d0/2
title: Phenotypic_data_Dryad
DOI: 10.5061/dryad.7763s/1
title: Vitamin D status of Thai school children

description: This dataset includes the following: demographic, anthropometric and vitamin D status (25-hydroxyvitamin D, 1,25-dihydroxyvitamin D and parathyroid hormone concentrations) of a group of northeast Thai schoolchildren
DOI: 10.5061/dryad.7kr08/1
title: SI1_Cyrt_PLS

description: Summary methods and data
DOI: 10.5061/dryad.7kr08/2
title: SI2_Cyrt3p_ML_str_cals_mrb

description: MrBayes Input file
DOI: 10.5061/dryad.7kr08/3
title: SI3_Cyrt3part4cal_ucln_size

description: BEAST input file
DOI: 10.5061/dryad.7s848/1
title: FOR_DRYAD_TandB_fwd_june2013_434

description: This file contains genotype data for 499 P. trichocarpa and 10 P. balsamifera accessions genotyped with a 34K SNP chip previously described in Geraldes et al 2013: “A 34K SNP genotyping array for Populus trichocarpa: Design, application to the study of natural populations and transferability to other Populus species.” Molecular Ecology Resources, 13(2):306-23. Details for all accessions genotyped can be found in Supplementary table 1 of “Landscape genomics of Populus trichocarpa: the role of hybridization, limited gene flow and natural selection in shaping patterns of population structure” accepted for publication in Evolution on July 8th 2014. This data file is a matrix with each locus in a row and each accession in a column. Genotypes are given in Illumina’s Forward strand as exported from Illumina’s GenomeStudio software. The numerical value after each genotype is the Genotype Call score. Loci with GenTrain score &lt;0.5 were considered failed assays and were not exported. The file contains data for the remaining 33,070 loci genotyped.
DOI: 10.5061/dryad.8ct18/1
title: H1

description: Aligned sequences for H1 avian subtype
DOI: 10.5061/dryad.8ct18/2
title: H2

description: Aligned sequences for H1 avian subtype
DOI: 10.5061/dryad.8ct18/3
title: H3

description: Aligned sequences for H3 avian subtype
DOI: 10.5061/dryad.8ct18/4
title: H4

description: Aligned sequences for H4 avian subtype
DOI: 10.5061/dryad.8ct18/5
title: H5

description: Aligned sequences for H5 avian subtype
DOI: 10.5061/dryad.8ct18/6
title: H6

description: Aligned sequences for H6 avian subtype
DOI: 10.5061/dryad.8ct18/7
title: H7

description: Aligned sequences for H7 avian subtype
DOI: 10.5061/dryad.8t581/1
title: Swamp sparrow prealternate molt timing data

description: Molt initiation date, sex, age, and treatment for all swamp sparrows (Melospiza georgiana) used in the study.
DOI: 10.5061/dryad.9fp3g/1
title: Data from: Season-specific and guild-specific effects of anthropogenic landscape modification on metacommunity structure of tropical bats

description: Data file contains protocol/methods of data collection, geographic location and general description of sampling sites, dates of data collections, and site-by-species abundance matrices for the dry season and wet season of 2010.
DOI: 10.5061/dryad.ff1tq/12
title: protein-sequence alignments

description: Peptide alignments for orthogroup clusters in the project, calculated using MUSCLE. These are multifasta alignment files.
DOI: 10.5061/dryad.ff1tq/13
title: trees - bipartitions

description: The RAxML bipartitions trees for the 3360 orthogroup alignments containing Glycine max. syntelogs. These are Newick tree files.
DOI: 10.5061/dryad.gs7k6/16
title: GenoDive

description: Self extracting stuffit folder of input files formatting for GenoDive.   One file for each monoecious population.   For each dioecious population there is one file for the fine-scale samples, plus one file (population name + 'f" for flowering) that contains fine-scale plus extra flowering samples. PDFs of genetic distance threshold choice are also in this folder.
DOI: 10.5061/dryad.gs7k6/17
title: GenCloneFiles

description: Self-extracting stuff-it folder with GenClone output files for each monoecious and dioecious population (separate folder for each population).
DOI: 10.5061/dryad.gs7k6/18
title: MvsD_Analyses

description: Word document with R script and output of analyses comparing genotypic diversity, clone size, and clone area between moneocious and dioecious populations.
DOI: 10.5061/dryad.gs7k6/19
title: Dioecious_Analyses

description: Analysis in R of phenotypic vs. genotypic sex ratio; comparison of size, area and flowering frequency of female vs. male clones in 11 dioecious populations.
DOI: 10.5061/dryad.h7pm2/1
title: Total genes RNA-seq

description: This spreadsheet shows all the genes found by RNA-seq and their counts (RPKM) in all four samples, WT-mock, WT-Rose Bengal, sak1-mock, sak1-Rose Bengal. Each column shows results from a single sequencing lane, each sample was loaded on two lanes.
DOI: 10.5061/dryad.m2db0/1
title: Rhamnus lycioides DDBB
DOI: 10.5061/dryad.p1r40/1
title: Fawn survival from birth/capture to 70 days of age

description: Capture-mark-recapture data for fawns captured at birth or opportunistically until 70 days of age, including individual covariates for mass at birth, timber harvest regime of capture watershed, age at capture, sex, and year.
DOI: 10.5061/dryad.p2kf0/1
title: Seaducks_Data_Viain_et_al
DOI: 10.5061/dryad.pq7d7/1
title: Phylogeny of Arabidopsis eukaryotic kinases

description: Phylogeny of 942 eukaryotic kinase domains of Arabidopsis proteins. An alignment of 491 eukaryotic protein kinases was downloaded on Feb 9, 2012 from http://kinase.com/human/kinome/phylogeny.html, and this alignment was used to compute a profile Hidden Markov Model (HMM) using the software HMMer [12]. All representative gene models from Arabidopsis thaliana (TAIR10_pep) were searched against the profile HMM using HMMer. In total, 1,045 sequences generated hits with an E-value lower than 0.01. These sequences were then aligned to the profile HMM. Two sequences (AT1G11300.1 and AT2G32800.1) each had two distinct kinase domains and both domains per gene were therefore included as separate sequences in the alignment, resulting in an alignment of 1,047 distinct Arabidopsis kinase domains (additional File 5). All alignment positions not part of the profile HMM were removed from the alignment. In addition, all sequences covering less than 70% of the profileHMM were removed using the software REAP [13]. The cutoff value of 70% corresponded to a threshold value in sequence coverage distribution with sharp decline of sequence coverage for 111 kinase domains below coverage of 70% (additional File 8). The final alignment then consisted of 317 columns from 942 sequences (kinase domains) and was used to compute a maximum likelihood phylogeny and 100 bootstrap replicates using the PROTCATWAG model of the RAxML program [14].
DOI: 10.5061/dryad.r06h2/1
title: Unweighted Percentages of Weekly Outpatient Visits for ILI and Google Flu Trends data

description: We retrieved the weekly unweighted percentages of patient visits due to influenza-like illness (ILI), reported through the U.S. Outpatient Influenza-like Illness Surveillance Network (ILINet), from http://www.cdc.gov/flu/weekly/ on 10th December 2013. Here, ILI is defined as fever with a temperature of 100°F or greater, accompanied by a cough or a sore throat. Note that the data recorded for a given week can be updated in subsequent weeks, if the CDC have reason to believe that an updated figure would be more accurate. Here, we focus our analysis on the latest data available on the date of retrieval.We obtained the weekly time series of query volume for searches relating to ILI symptoms from Google Flu Trends (http://www.google.org/flutrends) on 18th December 2013. This time series is restricted to searches made in the United States, and has been shown by Ginsberg et al. to be correlated with the percentage of physician visits in which a patient presents with influenza-like symptoms. The creators of Google Flu Trends state that their algorithm for identifying influenza related searches is constantly evaluated against figures reported by the CDC and is occasionally updated to reflect changes in human online search behaviour. Since publication of the work carried out by Ginsberg et al., the algorithm underwent updates in 2009 and 2013. Data analysed here is therefore an amalgamation of two different Google Flu Trends algorithms, with the transition occurring in August 2013.In both the patient visit and search engine query time series, weeks start on Sundays and end on Saturdays.
DOI: 10.5061/dryad.sm3tg/1
title: Dataset
DOI: 10.5061/dryad.v244v/1
title: Parasite and red blood counts

description: File contains daily parasite counts and red blood cell densities for infections with 5 genotypes of P. chabaudi which were either treated with artesunate or untreated (control). All methods as described in the paper. Please contact Laura Pollitt if any additional details are needed.
DOI: 10.5061/dryad.vd57n/1
title: alate_data

description: Data on the number of winged aphids
DOI: 10.7925/drs1.ucdlib_32290
title: 5 St. Stephen's Green North, Dublin 2, Ireland

description: Consists of 2 orthorectified images of the structure. The orthorectified images have been derived from one or more photographic image that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and other image layers have been extracted and saved in TIFF image files, as well as JPEG files in various resolutions to facilitate inspection.
description: Brickwork structure, 4 levels above ground, constructed 1820.
description: Dublin City Council, Record of Protected Structures (2010), no. 7764
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32294
title: 6-7 St. Stephen's Green North, Dublin 2, Ireland

description: Consists of 2 orthorectified images of the structure. The orthorectified images have been derived from one or more photographic image that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and other image layers have been extracted and saved in TIFF image files, as well as JPEG files in various resolutions to facilitate inspection.
description: Brickwork structure, 4 levels above ground, constructed 1870.
description: Dublin City Council, Record of Protected Structures (2010), no. 7765
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_32298
title: 8 St. Stephen's Green North, Dublin 2, Ireland

description: Consists of 2 orthorectified images of the structure. The orthorectified images have been derived from one or more photographic image that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and other image layers have been extracted and saved in TIFF image files, as well as JPEG files in various resolutions to facilitate inspection.
description: Brickwork structure, 4 levels above ground, constructed 1848.
description: Dublin City Council, Record of Protected Structures (2010), no. 7766
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.