cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6504257.v1
title: The under-reporting of energy intake influences the dietary pattern reported by obese women in the waiting list for bariatric surgery

description: ABSTRACT Objective To verify the interference of the energy intake under-reporting in the determination of the dietary patterns and nutrient intakes reported by obese women in the waiting list for bariatric surgery. Methods The study included 412 women aged 20 to 45 years with a body mass index ranging from 35 to 60kg/m2 who were on waiting list for bariatric surgery. Data from three reported food intake and physical activity, body weight, and height were used for estimating the reported energy intake, physical activity level, and resting energy expenditure. Subsequently, it was checked the biological plausibility of the reported energy intakes, classifying all participants as plausible reporters or under-reporters. Exploratory factor analysis was used to determine the participants’ dietary patterns. The Mann-Whitney test assessed the reported energy and nutrient intakes between plausible reporters and under-reporters groups. The Z-test assessed the variables of plausible reporters or under-reporters in relation to all participants of the study. Results Six dietary patterns were determined for all participants of study. After excluding information from under-reporting women, only two dietary patterns remained similar to those of all participants, while three other dietary patterns presented different conformations from food subgroups to plausible reporters. The reported energy intake did not present difference for the subgroups of fruits, leaf vegetables and vegetables. However, the energetic value reported for the other food subgroups was higher for the plausible reporters. Conclusion The under-reporting of energy intake influenced the determination of dietary patterns of obese women waiting for bariatric surgery.
DOI: 10.6084/m9.figshare.19251758.v4
title: Swartz et al_2023_Bird functional traits and ecosystem services

description: Datasets and code necessary to reproduce analyses described in Swartz et al. (2023) "<em>A functional trait approach reveals the effects of landscape context on ecosystem services provided by urban birds"</em> published in Landscape and Urban Planning
DOI: 10.6084/m9.figshare.22309033.v1
title: Anvi'o single-copy core gene taxonomy for IBD gut metagenomes

description: Each file in this folder is the output of the program `anvi-estimate-scg-taxonomy`, for a given ribosomal protein, with the `--long-format` and `--metagenome-mode` flags run on 1419 gut metagenomes generated from individuals who were diagnosed with IBD. <br> Learn more about the `anvi-estimate-scg-taxonomy` here: <br> https://anvio.org/m/anvi-estimate-scg-taxonomy
DOI: 10.6084/m9.figshare.28770647.v1
title: Verification of Concepts for Robotic and Real-Time Etching in Metallography

description: Metallography is a traditional discipline where precision and repeatability in sample preparation are crucial. However, standard etching methods often rely on operator experience, leading to variability in results. This work presents the concept of robotic etching, which eliminates human influence, ensures consistent timing and movement control during the process, and allows efficient integration with other laboratory procedures. Although robotic etching currently employs predetermined etching times based on prior experience and optimization, significant benefits of this method have already been demonstrated during the optimization stage itself. Particularly for electrolytic etching, this standardized robotic approach consistently achieves reliable and repeatable results, even with materials that are notoriously challenging to prepare. Additionally, real-time monitoring of the sample surface using a stereomicroscope (initially tested without robotic integration) offers further potential by enabling termination of the etching process precisely at the optimal moment. Combining robotic control with real-time monitoring thus represents a promising approach with the potential to significantly enhance the repeatability and quality of sample preparation, effectively reducing variability and minimizing the role of chance in the etching procedure. The results validate the feasibility of these methods and highlight their significant potential for enhancing efficiency and quality control in metallography.
DOI: 10.6084/m9.figshare.22635064.v1
title: ALBM input data

description: Ancillary input data for ALBM simulations <br> https://github.com/tanzeli1982/ALBM
DOI: 10.6084/m9.figshare.4888664.v1
title: Data set for manuscript "<b>Mucin anchoring of SARS-CoV-2 neutralizing nanobinders increases intranasal antiviral efficacy</b>"

description: All data for each figure of the manuscript
DOI: 10.17632/tyd6hx2ft2
title: JMD-LJ-2021

description: SNP microarray data for the manuscript entitled "Clinical Utility of Targeted Next-Generation Sequencing Assay to Detect Copy Number Variants associated with myelodysplastic syndrome in Myeloid Malignancies: Is It Ready for Prime Time?".
DOI: 10.6084/m9.figshare.28350227.v2
title: Sediment -slurry incubation data Kiel Bight

description: Geochemical data from Kiel Bight measured in sediment -slurry incubations between October 2021 and June 2022. Sediments were sampled using a multiple-corer from RV Littorina and scientific diving expeditions. The samples were measured in the laboratories of GEOMAR Helmholtz Centre for Ocean Research Kiel (Germany). Analytical detail can be found in Dale et al. (2013, DOI: https://doi.org/10.5194/bg-10-629-2013 ) and Perner et al. (2022, DOI: https://doi.org/10.3389/fmicb.2022.1096062).
DOI: 10.17632/7y4vgjcf98
title: Servitization and Digital Integration of Manufacturing Enterprises in China

description: This dataset contains survey responses from 331 Chinese manufacturing companies across various sectors, including machinery, electronics, and telecommunications. The survey explores the level of digital integration within these enterprises, focusing on digital technology, labor, and relationship resources. Researchers can analyze the data to understand the adoption of digital strategies and their impact on business performance in the manufacturing industry.
DOI: 10.6084/m9.figshare.26509684.v1
title: Supplementary Material for: ASSOCIATION BETWEEN CONGENITAL ANOMALIES AND LATE ONSET BACTERIAL INFECTIONS IN NEONATES ADMITTED TO NEONATAL INTENSIVE CARE UNITS IN AUSTRALIA AND NEW ZEALAND - A POPULATION-BASED COHORT STUDY

description: Introduction 
Compromised neonatal intensive care units (NICU) neonates are at risk of acquiring late-onset infections (LOS). Neonates born with congenital anomalies (CA), could have an additional LOS risk. 
Methods
Utilizing the population-based Australian and New Zealand Neonatal Network data from 2007-2017, bacterial LOS rates were determined in very preterm (VPT, &lt;32 week), moderate preterm (MPT, 32-36 weeks) and term (FT, 37-41 weeks) neonates with or without CA. Stratified by major surgery, the association between CA and bacterial LOS was evaluated. 
Results 
Of 102,808 neonates, 37.7%, 32.8% and 29.6% were born VPT, MPT and FT respectively. Among these, 3.4% VPT, 7.5% MPT and 16.2% FT neonates had CA. VPT neonates had the highest LOS rate (11.1%), compared to MPT (1.8%) and FT (1.8%) neonates. LOS rates were higher in CA neonates than those without [8.2% vs. 5.1% aRR 1.67, 95% CI 1.45-1.92]. Neonates with surgery had a higher LOS rate (14.2%) than neonates without surgery (4.4%, p&lt;0.001)). Among the neonates without surgery, CA neonates had consistently a higher LOS rates than those without CA (VPT 14.3% vs 9.6%; [aRR 1.32, 95%CI 1.11-1.57]; MPT 4% vs 0.9% [aRR 4.45, 95%CI 3.23-6.14]; and FT 2% vs 0.7% [aRR 2.87, 95%CI 1.97-4.18]). For the neonates with surgery, CA were not associated with additional LOS risks. 
Conclusion 
Overall, we reported higher rates of LOS in neonates with CA compared to those without CA. Regardless of gestation, CA was associated with an increased LOS risk among non-surgical neonates. Optimisation of infection prevention strategies for CA neonates should be explored. Future studies are needed to evaluate if the infection risk is caused by CA or associated complications.
DOI: 10.6084/m9.figshare.11901468.v3
title: Historical data sets and parameters of the two-area system

description: The zip file contains the generated historical data of DG output and load demand of the two-area system in numerical tests. The PDF file contains the parameters of the two-area system.
DOI: 10.6084/m9.figshare.28560710.v1
title: Simulated dataset for analysis via Large language models, via the analytical framework Analysis of Individual Heterogeneity and Discriminatory Accuracy (AIHDA).

description: This dataset consists of 10 000 simulated observations. It is utilized to explore and apply Large language models for data analysis, via the analytical framework Analysis of Individual Heterogeneity and Discriminatory Accuracy (AIHDA). The dataset is based on a previous study's aggregated results (Öberg J, Khalaf K, Perez Vicente R, Johnell K, Fastbom J, J. M. Geographic and socioeconomic differences in potentially inappropriate medication among older adults – Applying a simplified analysis of individual heterogeneity and discriminatory accuracy (AIHDA) for basic comparisons of healthcare quality. BMC Health Services Research. 2024 (Under peer-review). Empirical patient data must be analyzed within a secure IT environment to ensure confidentiality. By utilizing simulated patient data, we can apply a cloud-based GPT to our analysis, thereby gaining access to computational power and LLM capabilities that would otherwise be inaccessible to us via local LLMs. For the purposes of our study, a simulated database is a suitable solution. The simulated database was created by ChatGPT 4o based on the previous publication already referenced. By doing so, we can illustrate the application of GPT-based analysis in a real-world example of a healthcare quality indicator. The quality indicator, known as potentially inappropriate medication among older adults, is managed by the Swedish National Board of Health and Welfare (NBHW).<br>
DOI: 10.6084/m9.figshare.19499519.v1
title: patches and local annotations, slide 121, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.16643005.v1
title: Supplementary 2 Relation extraction result

description: <b>Bipolar Disorder Content Analysis</b>
DOI: 10.6084/m9.figshare.26156446.v1
title: 01-north of chengshantou.zip

description: In order to analyze the sediment exchange process 
between the North Yellow Sea and the South Yellow Sea in winter, the
 current field and sediment concentration in the sorthern part of Chengshantou, a representative
 area of the Yellow Sea, were observed in winter. The results show that in the 
north of Chengshantou sea area in winter, the current velocity does not change with the water
depth when the water depth is more than 20 m, and the variation range is less than 5 cm/s, and the
 tides are regular semi-diurnal tides. The resuspension of sediments in the sea area is not controlled
by the current velocity, but the sediment transport per unit width is mainly affected by the current
 velocity.
DOI: 10.25403/upresearchdata.23783265.v1
title: The impact of flexible working arrangements on employees

description: The dataset presented underpin a dissertation on evaluating the impact of flexible working arrangements on employee satistaction, motivation and performance. The data was collected via a survey that targeted working individuals that are over the age of 18. SmartPLS was used to analyse the data. SmartPLS Structural Models.zip contains the SmartPLS files for the structural models that were used, titled main structural model and subdivided structural model. In the dissertation, for the analysis of the <em>q</em><sup><em>2</em></sup> effect size, model re-estimation was conducted in which a specific predecessor of an endogenous latent variable was removed (i.e. flexible working arrangements, motivation, and satisfaction) in order to obtain the values to complete the calculation. Complete dataset containing biographics, indicators, and questions (included for comprehension).<em>csv</em> contains the full dataset, along with the biographic data, to identify which questions were associated with the indicators. This dataset has been included for comprehension and was not analysed using SmartPLS. Complete dataset used for analysis.csv contains the full dataset. It only contains the indicators and the survey responses. The remaining datasets (30 and Under (age).csv, 31 and over (age).csv, female.csv, male.csv, No has not made prior use of flexible working arrangements.csv, and Yes has made prior use of flexible working arrangements.csv) contain the filtered data which was used for the comparative analysis. Each dataset only contains survey responses associated with the specific category, i.e. age 30 and under, age 31 and over, female, male, no has not made prior use of flexible working arrangements, and yes has made prior use of flexible working arrangements. All datasets were applied to the SmartPLS Structural Model titled main structural model to obtain results. The SmartPLS structural model titled subdivided structural model only made use of the dataset complete dataset used for analysis.csv, in which the indicators associated with flexible working hours and flexible working locations were linked to the associated latent variable, either flexible working hours or flexible working locations. For the questions that were asked in the reverse/negative format, their answers were reversed/recoded so that all data was presented in the same progression, starting from the least desirable outcome, coded as 1, to the most desirable outcome, coded as 5.
DOI: 10.6084/m9.figshare.13415930.v1
title: Supplementary Material for: Acute Kidney Injury and Renal Replacement Therapy in Critically Ill COVID-19 Patients: Risk Factors and Outcomes: A Single-Center Experience in Brazil

description: <b><i>Background:</i></b> Critically ill patients with COVID-19 may develop multiple organ dysfunction syndrome, including acute kidney injury (AKI). We report the incidence, risk factors, associations, and outcomes of AKI and renal replacement therapy (RRT) in critically ill COVID-19 patients. <b><i>Methods:</i></b> We performed a retrospective cohort study of adult patients with COVID-19 diagnosis admitted to the intensive care unit (ICU) between March 2020 and May 2020. Multivariable logistic regression analysis was applied to identify risk factors for the development of AKI and use of RRT. The primary outcome was 60-day mortality after ICU admission. <b><i>Results:</i></b> 101 (50.2%) patients developed AKI (72% on the first day of invasive mechanical ventilation [IMV]), and thirty-four (17%) required RRT. Risk factors for AKI included higher baseline Cr (OR 2.50 [1.33–4.69], <i>p</i> = 0.005), diuretic use (OR 4.14 [1.27–13.49], <i>p</i> = 0.019), and IMV (OR 7.60 [1.37–42.05], <i>p</i> = 0.020). A higher C-reactive protein level was an additional risk factor for RRT (OR 2.12 [1.16–4.33], <i>p</i> = 0.023). Overall 60-day mortality was 14.4% {23.8% (<i>n</i> = 24) in the AKI group versus 5% (<i>n</i> = 5) in the non-AKI group (HR 2.79 [1.04–7.49], <i>p</i> = 0.040); and 35.3% (<i>n</i> = 12) in the RRT group versus 10.2% (<i>n</i> = 17) in the non-RRT group, respectively (HR 2.21 [1.01–4.85], <i>p</i> = 0.047)}. <b><i>Conclusions:</i></b> AKI was common among critically ill COVID-19 patients and occurred early in association with IMV. One in 6 AKI patients received RRT and 1 in 3 patients treated with RRT died in hospital. These findings provide important prognostic information for clinicians caring for these patients.
DOI: 10.6084/m9.figshare.25512211.v4
title: Data for the manuscript “<b>Warmer and wider river systems accelerate permafrost thaw on the Third Pole</b>”

description: This dataset provide key data of the study “<b>Warmer and wider river systems accelerate permafrost thaw on the Third Pole</b>”. This study investigates the dynamics of a representative permafrost river on the Third Pole and the corresponding changes of underlying permafrost. The results indicate a widening and warming trend of the river, which accelerates the sub-river permafrost thaw.
DOI: 10.17632/nskggn8kw7
title: Base de dados: sugestões de alterações nas dimensões da quadra, altura da cesta e nas características da bola de basquete para a categoria sub-12

description: Os dados apresentados dizem respeito a sugestões para modificar as características do jogo de basquete voltado para a categoria Sub 12, ou seja, crianças com idades entre 11 e 12 anos. Especificamente, através do Modelo de Potência/Alometria, foram recomendadas alterações nas dimensões da quadra, na altura da cesta, na circunferência e no peso da bola. Dessa forma, o objetivo é ajustar o jogo de basquete às particularidades fisiológicas das crianças, evitando a reprodução dos elementos que caracterizam os jogos de adultos nesta categoria. Por fim, o resultado do estudo compara as medidas oficiais, as recomendações do Minibasquete e os achados obtidos nesta pesquisa.
DOI: 10.6084/m9.figshare.16897066.v1
title: March 2021 Covid-19 Vaccines Twitter Streaming Dataset

description: The file contains Tweet IDs* for COVID-19 related tweets containing at <b>least one vaccine-related word</b> (i.e., words that start with vaccin*, vacin*, or vax*) collected in <b>March, 2021</b> from <b>Twitter's COVID-19 Streaming Endpoint </b>via a custom script developed by the <b>Social Media Lab (https://socialmedialab.ca/)</b>.<br>Visit <b>our interactive dashboard at https://stream.covid19misinfo.org</b>/ for a preview and some general stats about this COVID-19 Twitter streaming dataset.<br>For more info about <b>Twitter's COVID-19 Streaming Endpoint</b>, visit <b>https://developer.twitter.com/en/docs/labs/covid19-stream/overview</b><br><b>Note</b>: In accordance with Twitter API Terms, the dataset only includes Tweet IDs (as opposed to the actual tweets and associated metadata). To recollect tweets contained in this dataset, you can use programs such as Hydrator (https://github.com/DocNow/hydrator/) or the Python library Twarc (https://github.com/DocNow/twarc/).
DOI: 10.6084/m9.figshare.26827666.v1
title: Compressive strength of UHPC

description: Data set derived from experimental results and literature results
DOI: 10.6084/m9.figshare.27021589.v1
title: SSP126

description: The data consist of simulations of the carbon cycle in the terrestrial ecosystems of China from 2015 to 2100, using the Community Earth System Model (CESM) under the SSP1-2.6 scenario. The SSP1-2.6 scenario represents a low-emission pathway, consistent with efforts to limit global warming to well below 2°C. The dataset includes variables such as net primary production (NPP), soil carbon stocks, vegetation carbon, and carbon fluxes between the atmosphere and land. These simulations provide insights into how land-use changes and climate change impact carbon dynamics over time, specifically within the context of China's terrestrial ecosystems.
DOI: 10.6084/m9.figshare.2198773.v1
title: Regulatory region definitions

description: Annotations of 'regulatory regions' generated and described in article 'An integrative analysis of non-coding regulatory DNA variations associated with autism'. All coordinates are human hg19 assembly. Refer to article for details, including references and funding.<br>
DOI: 10.6084/m9.figshare.23284334.v2
title: <strong>Reducing spatial resolution increased net primary productivity prediction of terrestrial ecosystems: A Random Forest approach</strong>

description: Net primary production (NPP) is a pivotal component of the terrestrial carbon dynamic, as it directly contributes to the sequestration of atmospheric carbon by vegetation. However, significant variations and uncertainties persist in both the total amount and spatiotemporal patterns of terrestrial NPP, primarily stemming from discrepancies among datasets, modeling approaches, and spatial resolutions. In order to assess the influence of different spatial resolutions on global NPP, we employed a random forest (RF) model using a comprehensive global observational dataset to predict NPP at 0.05°, 0.25°, and 0.5° resolutions. Our dataset contained two types of data: field observations of global NPP and predicted NPP at three resolutions. The relevant details of the data files are as follows:Filename: 02_NPP_1981_2018_0.05_degree.nc; 03_NPP_1981_2018_0.25_degree.nc; 04_NPP_1981_2018_0.5_degree.ncFile information：‘02_NPP_1981_2018_0.05_degree.nc’ is the predicted global NPP data at 0.05° spatial resolution; ‘03_NPP_1981_2018_0.25_degree.nc’ is the predicted global NPP data at 0.25° spatial resolution; ‘04_NPP_1981_2018_0.5_degree.nc’ is the predicted global NPP data at 0.5° spatial resolution.The unit for these data is 'g C m<sup>-2 </sup>a<sup>-1</sup>'.<b>Corresponding author</b>: Xiaolu Tang (lxtt2010@163.com)<b>Acknowledgments</b>:The study was supported by the National Science Foundation of China (32271856); the Everest Scientific Research Program, Chengdu University of Technology (80000-2021ZF11410) and Large Engineering Project of Huaneng, China (JC2022/D01).
DOI: 10.1184/r1/26951887.v1
title: Data from "Recent Visual Experience Reshapes V4 Neuronal Activity and Improves Perceptual Performance"

description: This contains data and code associated with the paper "Recent Visual Experience Reshapes V4 Neuronal Activity and Improves Perceptual Performance" published in the Journal of Neuroscience.
<br>
https://doi.org/10.1523/JNEUROSCI.1764-23.2024
DOI: 10.17632/w5rpxwf99g
title: Stable water isotope monitoring network of different water bodies in Shiyang River Basin, a typical arid river in China (Supplemental Edition)

description: Data set of isotopes of different water bodies (precipitation, surface water, groundwater,soil water, and plant water) in the Shiyang River Basin from 2015 to 2019. A total of 52 monitoring points were set up in the Shiyang River Basin , among which 35 were upstream, 6 in the midstream, and 11 in the downstream. 6,760 samples have been obtained, including 1,210 precipitation samples (P1-P12), 1,101 surface water samples (S1-S35), 161 groundwater samples (G1-G17), 3,779 soil water samples (S1-S18), and 509 plant water samples (P1-P12).
DOI: 10.6084/m9.figshare.28616207.v1
title: IDWE_CHM (NRT)

description: A near-real-time (NRT) extension of the IDWE_CHM dataset with ongoing daily updates beyond 2023. This NRT product continues to apply the IDWE framework on incoming data, thereby extending the record in near real-time. Users can obtain timely precipitation estimates with the same ~0.1° resolution and methodology consistency as the historical dataset.The IDWE_CHM dataset provides <b>four precipitation variables</b>, all derived from the ensemble framework but with slightly different modeling approaches:<b>ENS_Reg</b> – A purely regression-based merged precipitation estimate. This product is generated by optimally weighting and combining the input datasets (ERA5-Land, IMERG, GSMaP, etc.) using regression, without additional classification. It serves as a baseline for the IDWE approach.<b>ENS_RegCla1</b>, <b>ENS_RegCla2</b>, <b>ENS_RegCla3</b> – Three variants of a hybrid <i>regression-plus-classification</i> approach (collectively called <b>ENS_RegCla</b>). These are produced by first applying the regression merging (as in ENS_Reg) and then using a classification step to adjust the estimates. The classification is enhanced with incremental learning, meaning the algorithm learns from errors over time. These three variants may correspond to different configurations or epochs of incremental learning, and they generally show improved skill in capturing precipitation occurrence and extremes compared to a regression-only merge.<br>
DOI: 10.6084/m9.figshare.20781417.v1
title: Human Proteins

description: This folder includes the features calculatd by Jet2.