cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13073240.v1
title: DBrasiliensis

description: The DBrasiliensis dataset is a repository with 246 images containing 5141 cysts of Dendrocephalus brasiliensis, a native species from South America. The cyst examples were obtained from substrates portions took from the bottom of an aquarium used as an incubator and split into two parts: one to capture the training images and the other to capture the test images.<br><br>Training images: the substrate was fixed on white coverslips and observed under a XTRAD USB digital microscope model XT-2036, in which the images were captured using 52x objective lenses. Subsequently, the LabelImg software was used to label cysts in both PASCAL VOC and YOLO formats. There are 111 images in all for training with a resolution of 640x480, containing 3173 annotated cysts. <br><br>Test images: the testing set was built with the aim of assigning a weight to a set of images. The substrate was split into small portions on a white coverslip and weigh it using a precision scale. Then, we capture an image of each portion of the substrate using the digital microscope. The captured images were stored in a folder, whose name indicates the amount of cyst and the weight of the substrate contained in the set of images. Besides, the file name of each image in the folder indicates the image number and amount of cyst contained in it. The complete testing set has 1968 cysts in 135 images with a resolution of 640x480 distributed in 10 folders. The substrate weight used to build the testing set is 4.24 grams. <br>
DOI: 10.6084/m9.figshare.22682833.v2
title: Genome file

description: TM-1 HAU v2 and 3-79 HAU v3 genomes and annotations files.
DOI: 10.6084/m9.figshare.25587012.v1
title: Barbourofelis CT-scan

description: stl models of the skull and jaw of Barbourofelis fricki
DOI: 10.6084/m9.figshare.25933717.v1
title: GWAS Summary Statistics from "TransferGWAS of T1-weighted Brain MRI Data from the UK Biobank"

description: Summary statistics of a GWAS of 20 deep neural network features extracted from T1-weighted brain MRI scans from 36,311 participants of the UK Biobank
DOI: 10.6084/m9.figshare.26325676.v1
title: Sea-level rise and mental health among coastal communities

description: This cross-sectional study explores the impact of sea-level rise on mental health in Bangladesh's coastal communities. In 2021, during the pre-monsoon season, we surveyed 1,200 residents from regions with varying vulnerabilities to sea-level rise: high, moderate, and low. The survey assessed psychological distress, depression, anxiety, stress, environmental stressors, resource loss, and demographic factors. Results showed significantly higher mental health issues in the high-vulnerability areas. Resource loss was a key mediator linking environmental stressors to mental health outcomes. Additionally, demographic analysis revealed that older adults and women were disproportionately affected. These findings highlight the critical need for targeted mental health interventions in areas increasingly threatened by sea-level rise.
DOI: 10.6084/m9.figshare.27634032.v7
title: Source data for 'Navigating condensate microenvironment to enhance small molecule drug targeting'

description: This repository contains source data for Figures 1-6 and Extended Data Figures. It also includes downloaded raw data, processed data, and gels of purified proteins.
DOI: 10.6084/m9.figshare.21510738.v1
title: Supplementary tables for 'Chromosomal-level genome assembly of potato tuberworm, Phthorimaea operculella: a pest of solanaceous crops'

description: <strong>Supplementary Table 1. </strong>Annotation of repeat sequences in <em>Phthorimaea operculella</em>. <strong>Supplementary Table 2. </strong>The 23 reported genomes used in this study. <strong>Supplementary Table 3.</strong> Domain annotation of <em>Phthorimaea operculella</em>. <strong>Supplementary Table 4.</strong> Annotation of pathways in <em>Phthorimaea operculella</em>. <strong>Supplementary Table 5. </strong>The discovery of insecticide-tolerance and chemosensory genes from 20 genomes with BUSCO completeness of larger than 80%. <strong>Supplementary Table 6. </strong>A total of 69,067 orthogroups for genes from these 24 genomes.
DOI: 10.6084/m9.figshare.25991677.v1
title: <b>Appendixes of </b><b>The Impact of Duolingo in Reading and Writing Proficiency</b>

description: Appendixes of <b>The Impact of Duolingo in Reading and Writing Proficiency</b>
DOI: 10.6084/m9.figshare.26409430.v2
title: Transcriptome profiling and co-expression network analysis of 96 <i>Haematococcus pluvialis</i> samples

description: <i>Haematococcus pluvialis</i> is a microalga known for producing the red carotenoid, astaxanthin. Key research areas to improve productivity include optimizing vegetative biomass, enhancing astaxanthin content, and controlling secondary cell wall formation. In this study, RNA-seq was conducted on 96<i> </i><i>H. pluvialis</i> samples under various treatments and time points, generating 96.7 GB of high-quality data (2,080,511,173 clean reads, quality score &gt; 30). Gene expression was quantified as transcripts per million (TPM), and genes with similar expression patterns were clustered. A co-expression network, constructed with a soft threshold of β = 7 (R² &gt; 0.9), identified 39 co-expression modules, each averaging 732 genes. Additionally, the re-annotation process provided functional descriptions for around 8,600 previously uncharacterized genes. Gene functional classification analysis revealed their involvement in metabolic pathways related to genetic information processing and primary/secondary metabolite metabolism. This dataset provides a valuable resource for exploring the molecular mechanisms involved in critical processes such as growth regulation, astaxanthin accumulation, and secondary cell wall synthesis in<i> </i><i>H. pluvialis</i><i>.</i>
DOI: 10.6084/m9.figshare.27288489.v1
title: <b>Genome-Wide Association Study and Genomic Prediction of Soft Wheat End-Use Quality Traits Under Post-Anthesis Heat-Stressed Conditions</b>

description: This study aimed to identify genomic regions associated with wheat quality traits using genome-wide association studies (GWAS) and evaluate prediction accuracy of different genomic selection (GS) models. A panel of 236 soft red facultative wheat genotypes was evaluated for end-use quality traits across four heat-stressed environments over three years.
DOI: 10.6084/m9.figshare.28171997.v1
title: dataset-Ecological Restoration of Exposed Slopes Enhances Soil Organic Carbon Accumulation

description: Ecological Restoration of Exposed Slopes Enhances Soil Organic Carbon Accumulation
DOI: 10.6084/m9.figshare.4004265.v1
title: Ketamine up-regulates a cluster of intronic miRNAs within the serotonin receptor 2C gene by inhibiting glycogen synthase kinase-3

description: <b>Objectives:</b> We examined mechanisms that contribute to the rapid antidepressant effect of ketamine in mice that is dependent on glycogen synthase kinase-3 (GSK3) inhibition. <b>Methods:</b> We measured serotonergic (5HT)-2C-receptor (5HTR2C) cluster microRNA (miRNA) levels in mouse hippocampus after administering an antidepressant dose of ketamine (10 mg/kg) in wild-type and GSK3 knockin mice, after GSK3 inhibition with L803-mts, and in learned helpless mice. <b>Results:</b> Ketamine up-regulated cluster miRNAs 448-3p, 764-5p, 1264-3p, 1298-5p and 1912-3p (2- to 11-fold). This up-regulation was abolished in GSK3 knockin mice that express mutant constitutively active GSK3. The GSK3 specific inhibitor L803-mts was antidepressant in the learned helplessness and novelty suppressed feeding depression-like behaviours and up-regulated the 5HTR2C miRNA cluster in mouse hippocampus. After administration of the learned helplessness paradigm mice were divided into cohorts that were resilient (non-depressed) or were susceptible (depressed) to learned helplessness. The resilient, but not depressed, mice displayed increased hippocampal levels of miRNAs 448-3p and 1264-3p. Administration of an antagonist to miRNA 448-3p diminished the antidepressant effect of ketamine in the learned helplessness paradigm, indicating that up-regulation of miRNA 448-3p provides an antidepressant action. <b>Conclusions:</b> These findings identify a new outcome of GSK3 inhibition by ketamine that may contribute to antidepressant effects.
DOI: 10.17632/tmxvzvyfm7
title: Diabetes review

description: papers for review
DOI: 10.6084/m9.figshare.22317175.v1
title: Mechanical properties of Titanium

description: Mechanical properties of titanium alloy (Ti6Al4V): Young's modulus, density, poisson coefficient, elastic limit and ultimate strength.
DOI: 10.6084/m9.figshare.4697308.v2
title: An Artificial EMG Generation Model Based on Signal-dependent Noise and Related Application to Motion Classification

description: The experimental data of measured and artificial EMG signals.
DOI: 10.17632/6fc7my86t4
title: Honeypot data

description: Honeypot data from sensors Dionaea installed at the Information Lab of the University of Muhammadiyah Malang, from January 2019 to December 2019, there were around 6.000,000 more attacks, the average attack reaching 500 to 700 attacks every day. This data is only in the form of attack data (Date, Sensor, Country, Src, IP, etc., port, Protocol, Honeypot Sensor), while Malware data can contact us at lab.informatics@umm.ac.id.
DOI: 10.6084/m9.figshare.12101376.v1
title: processed images for CO2 data at 570eV

description: This is a set of processed VMI images for CO2 570eV.
DOI: 10.6084/m9.figshare.14847963.v1
title: Responses of soil bacterial and fungal communities to freeze-thaw cycles in a Chinese temperate forest

description: The structure and function of soil microbial community may be different in different stages of freeze-thaw cycle. The dataset contain bacteria 16S V4 and fungi ITS1 amplification sequencing<br>
DOI: 10.6084/m9.figshare.21840498.v1
title: Molecular phylogeny, systematics and biogeography of the subfamily Nemognathinae (Coleoptera, Meloidae)

description: Data are provided in .fasta and .nex (Nexus) format as alignments. .fasta files can be used for several analyses on many softwares (e.g. MEGA, IQTree etc.) .nex files were built to be used on MrBayes for Bayesian reconstruction or on BEAST. <br> .tre and .treefile are also included. These files contain the output trees in Nexus format and can be opened in a text editor (such as notepad) or in FigTree to visualize the phylogenetic tree. <br> In the File Name: "SG" means: Single Genes --&gt; include the alignments of each gene analysed and provided both in .fasta and .nex, and the results of maximum likelihood (.treefile) and bayesian inference (.tre) obtained with IQtree and MrBayes respectively. <br> "Beast" indicates all th files used in the software BEAST, as well as the output obtained (.tre). <br> "DS1": refers to the dataset including only specimens for which at least two out of five markers were amplified. "Ds2": refers to the dataset including all the available specimens. <br> Both DS1 and DS2 include the alignment obtained by the combination of the 5 genes used and are provided in .fasta and .nex. <br> "PARTITIONFILE": provided in .txt for both DS1 and DS2, is the partition file defining the structure of the aignment.
DOI: 10.6084/m9.figshare.25493233.v1
title: Raw Data Package of compressed archive of video recordings for Moth drinking rate and proboscis depth project, specifically for submission titled "Feeding rate in adult Manduca sexta is unaffected by proboscis submergence depth" submitted to PLOS ONE.

description: The raw data in a compressed archive of .CINE format video files created and analyzed in the research project focused on moth drinking rates and proboscis submergence for adult Manduca sexta.This is the raw data for the submission to PLOS ONE titled "Feeding rate in adult Manduca sexta is unaffected by proboscis submergence depth."The file data_package.tar.gz is a gzip-compressed tar archive containing the video files used for the analysis described in the mentioned paper, which is implemented by the code in the GitHub repository at https://github.com/Tomas-Pierce-at-UNC/MothDrinks.Each video in the archive is in the .cine format defined by Phantom Vision and depicts a feeding bout for a moth and date identified in the file name. Video data is 8-bit and single-channel (grayscale). The code expects the data files to be within a folder named data2/ within the same folder the code is stored, so that the relative file paths for data files are data2/*.cine.
DOI: 10.6084/m9.figshare.5123938.v1
title: Supplementary Material for: AGO Recommendations for Diagnosis and Treatment of Patients with Early and Metastatic Breast Cancer: Update 2012

description: Medicine
DOI: 10.17632/8ptkfx254m
title: Calibration of Solar Pyranometers for Accurate Solar Irradiance Measurements: A Data Set from the Pre- and Post-Calibration Process.

description: This study outlines the calibration of five solar pyranometers following ISO 9847 standards to improve the accuracy of solar irradiance measurements. The calibration process involved data collection, consistency checks, and calculations to determine calibration factors. Post-calibration results demonstrated reduced systematic errors and more accurate irradiance readings. The resulting data set reports on the entire calibration process, including pre- and post-calibration irradiance measurements, which enhances the reliability of solar energy measurements for future applications. The calibrated pyranometers were then used to measure vertical, horizontal, and ground-reflected solar irradiance, including diffuse radiation.
DOI: 10.6084/m9.figshare.27074467.v1
title: RSCU values per gene in the yeast genomes

description: Relative synonymous codon usage was calculated for all genomes in the Y1000+ database. The RSCU for orders with a CTG codon reassignment were computed taking the reassignment into account. The script used to generate the RSCU values can be found here: https://github.com/The-Lab-LaBella/RSCU_Calculation_Analysis<br>The file contains the name of the assemblies, as listed in the supplemental data 1 of Opulente et al 2024. The columns contain the clade/order and codons analyzed.
DOI: 10.6084/m9.figshare.28828043.v1
title: <b>Endogenous Money and Monetary Policy Autonomy in India: A Compensation View</b>

description: This dataset is used in the paper titled "<b>Endogenous Money and Monetary Policy Autonomy in India: A Compensation View</b>".
DOI: 10.6084/m9.figshare.6291740.v1
title: Diagnostic SNP markers

description: A total of 2,015 species-specific SNPs to monitor hybridization between sika deer and wapiti
DOI: 10.6084/m9.figshare.7944278.v1
title: gVCF_NA18502

description: 1000 Genomes gVCF mapped to hs37d5 for NA18502. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/279783p5df
title: Lithium-ion battery cycle data

description: The data includes 4 documents:
1.	EIL-MJ1-015: electrochemical cycle data of Li-ion battery INR18650MJ1 published by University College London.
2.	Simulation results of single battery model capacity fade: simulation results of single Li-ion battery INR18650MJ1 capacity fade under the cycle condition in the same way as the entity experiment of Li-ion battery done by University College London.
3.	Simulation results of 34 experimental group: simulation results of capacity fading of lithium-ion battery pack under different cycle conditions.
4.	Simulation results of No.35 experimental group: simulation results of capacity fading of lithium-ion battery pack under a certain cycle condition.
DOI: 10.17632/knmbfjsdwn
title: DEVANAGARI CAPTCHA DATASET OF 1 Million Images :  A challenge Test

description: CAPTCHA (Completely Automated Public Turing Tests to Tell Computers and Humans Apart). Only humans can successfully complete this test; current computer systems cannot. It is utilized in several applications for both human and machine identification. Text-based CAPTCHAs are the most typical type used on websites. Most of the letters in this protected CAPTCHA script are in English, it is challenging for rural residents who only speak their native tongues to pass the test. 
Devanagari characters have more complex characters than standard English characters and numeral-based CAPTCHAs, which makes machine recognition much more difficult. The majority of official websites in India only offer information in Devanagari. Unfortunately, websites do not use Devanagari CAPTCHAs.As a result, we have created a new text-based CAPTCHA in Devanagari script in this article. 
A computer/printed font and handwritten Devanagari character(34 each) and number(10 each) , in total 44+44 = 88 character images are used to design CAPTCHA. General CAPTCHA generation principles are used to add noise to the image using digital image processing techniques. Size of each CAPTCHA image is 250 X 90 pixels. 04 (Four) types of Character Sets are used  – Printed Alphabet(34), Handwritten Alphabet(34),  Printed Digit(10), and Handwritten Digit(10). Generated 11 Classes from these 04 combinations. 
The string length of the CAPTCHA image considered here is FIVE, SIX, and SEVEN ( 5, 6, 7). For each class – 03 (THREE) subclasses are created depending upon string length. In total there are 11 classes X 3 subclasses = 33 subclasses. So 33 types of CAPTCHA images were generated. For each class, 10,000 CAPTCHA images were created. For 11 Classes  X 10,000 images , a Devanagari CAPTCHA Data set of 1,10,000 ( One Million Ten Thousand) images were created using Python.
To make the CAPTCHA image less recognized or not easily broken. Passing a test with identifying Devanagari alphabets is difficult. It is beneficial to researchers who are investigating captcha recognition in this area.
This dataset is helpful to researcher to design OCR for recognize Devanagari CAPTCHA and break it.
DOI: 10.17632/t2nwpwwsmg
title: Experts’ Evaluation: Datasets of Rating Questionnaires for the HEUROBOX Heuristics to Evaluate Industrial Collaborative Robotic Environments

description: This study presents a dataset derived from expert evaluation aimed at assessing two aspects: (1) the usability of a newly developed set of heuristics (HEUROBOX), and (2) the relative importance of heuristic categories in evaluating collaborative robotic environments for industrial applications. The experts were carefully selected based on their expertise in various relevant fields, including collaborative robotics, human factors, biomechanics, and manufacturing. Their evaluations were obtained through the System Usability Scale (SUS) questionnaire and category-rating questionnaires, which were employed in conjunction with the Analytical Hierarchy Process (AHP) methodology. The resulting dataset was analyzed using AHP algorithms implemented in the R programming language. The transparency of both the data and the code allows design practitioners and researchers to utilize them for replication and further analysis, thereby adhering to the principles of reproducible research in the context of multiple-criteria decision analysis.
DOI: 10.6084/m9.figshare.13151228.v1
title: Anisotropy of Magnetic Susceptibility Data, Prague Synform, Barrandian area (Inverse Fabrics, Sites 7, 18, 47)

description: This dataset contains anisotropy of magnetic susceptibility (AMS) data related to the article titled: Magnetic Anisotropy of Rocks: A new Classification of Inverse Magnetic Fabrics to Help Geological Interpretations .
DOI: 10.6084/m9.figshare.13356959.v1
title: RISED - Data Pemekaran Daerah (Kab/Kota)

description: Data ini mencakup data kabupaten/kota yang mengalami pemekaran menjadi kabupaten baru dan tahun pelaksanaan pemekaran. Data juga mencakup tahun dimana kabupaten/kota diberikan Dana Alokasi Umum.
DOI: 10.6084/m9.figshare.25513990.v1
title: Appendix dataset for "Differential responses of soil phosphorus fractions to nitrogen and phosphorus fertilization: A global meta-analysis"

description: Here, we conducted a global meta-analysis based on 818 observations of soil P fractions from 99 field N and P addition experiments in forest, grassland, and cropland ecosystems ranging from temperate to tropical zones. In the dataset, two commonly used P fraction extraction methods were employed: the Chang and Jackson inorganic P (Pi) and the Hedley P extraction methods.
DOI: 10.6084/m9.figshare.6744206.v1
title: Raman spectroscopic techniques to detect ovarian cancer biomarkers in blood plasma

description: Raw and pre-processed spectra after spontaneous Raman and surface-enhanced Raman spectroscopy (SERS) on blood plasma samples.
DOI: 10.6084/m9.figshare.8428868.v1
title: Table S1 - Muscle perfusion and oxygenation.

description: <br>Local skeletal muscle perfusion (blood flow) and oxygenation (PO<sub>2</sub>) in normovolemic and hemorrhagic shock rats.
DOI: 10.6084/m9.figshare.21370002.v2
title: The near-bed flow structure and bed shear stresses within emergent vegetation [Dataset]

description: The data presented here are from “The near-bed flow structure and bed shear stresses within emergent vegetation ” by Conde-Frias et al. (2022) in Water Resources Research.
DOI: 10.6084/m9.figshare.27609957.v1
title: Table-S1-Astyanax-lacustris-pantranscriptome

description: <i>Astyanax lacustris</i> as a model native fish laboratory species. The reproductive studies of this species have already been performed. Nevertheless, there is a relative shortcoming of gene sequence information available in public databases, which hinder their use in more comprehensive investigations that employ sensitivity molecular biology techniques to assess gene expression profile for biomarker identification.
DOI: 10.6084/m9.figshare.7570727.v3
title: Whole genome sequencing of female pompano (Trachinotus ovatus)

description: Golden pompano (<i>Trachinotus ovatus</i>), belong to the Carangidae family, are important aquaculture fish in China due to their economic value. To aid genomic research in this species, a high-quality reference genome of the golden pompano would be a very useful resource. We produced 106 Gb cleaned Illumina data from paired-end and mate-pair libraries. Another 16.9 Gb long reads data on Pacbio platform were also sequenced. By combination of Illumina and Pacbio reads, we generated a 648 Mb female pompano assembly with a contig N50 size of 1.8 Mb and a scaffold N50 size of 5.05 Mb. With 114.8 Gb cleaned Hi-C data, 99.4% of the total assembled bases were anchored into 24 chromosomes. This assembly would promote the scientific research and aquaculture related to this fish.
DOI: 10.6084/m9.figshare.c.3597548_d3.v1
title: Additional file 1: Table S1. of Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01

description: NCBI ssID, SNP ID of SoySNP50K SNPs (Song et al. [23]), genome position Glyma1.01, corresponding genome position in the Wm82.a2.v1 assembly, gene IDs of SNPs in the Wm82.a2.v1 assembly and genetic linkage group and linkage position of the SNPs in the Williams 82 x PI479752 (WP) and Essex x Williams 82 (EW) populations (XLS 10149 kb)