cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3625586_d11
title: Additional file 8: of Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil

description: Summary of dominant arm selection of detected miRNAs. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.c.3625586_d9
title: Additional file 9: of Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil

description: mirDeep2 results of known miRNA identification and novel miRNA discovery; ( A ) miRDeep2 performance for score cut-offs â  10 to 10, ( B ) novel miRNA information, ( C ) candidate novel miRNAs and ( D ) novel Precursors which were reversely complementary to known precursors. (XLSX 76 kb)
DOI: 10.6084/m9.figshare.c.3625616_d1
title: Additional file 1: of SjCa8, a calcium-binding protein from Schistosoma japonicum, inhibits cell migration and suppresses nitric oxide release of RAW264.7 macrophages

description: Microarray Analysis of 84 Genes Involved in NO Signaling. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3625586_d6
title: Additional file 6: of Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil

description: Summary of most abundant isomiRs of detected miRNAs. (XLSX 36 kb)
DOI: 10.6084/m9.figshare.c.3625277_d3
title: Table S1

description: List of genes coexpressed with PCDH gene clusters. Microarray analysis results stored in public databases were analyzed for genes showing coexpression with the different PCDH gene clusters (XLSX 13Â kb)
DOI: 10.17608/k6.auckland.28004864
title: Supporting data for a systematic literature review of space industry environmental impact

description: <b>Scoping SLR Data:</b> this file contains the results of the scoping SLR conducted on 26 Mar 2024. It provides the results for the critical appraisal (32 results) and It also contains the full results across the three databases which composed this SLR.<b>Second SLR Data:</b> this file contains the results of the second SLR conducted on 8 Aug 2024. It provides the results for the critical appraisal (252 results) and the results for the qualitative synthesis (21 results). It also contains the full results from each of the individual searches which composed this SLR.
DOI: 10.6084/m9.figshare.c.3625268_d4
title: Additional file 2: Table S2. of Comparative genomic analysis of the WRKY III gene family in populus, grape, arabidopsis and rice

description: The function prediction of WRKY III genes of Populus, Grape, Arabidopsis, Rice. (XLS 169 kb)
DOI: 10.17608/k6.auckland.28004864.v1
title: Supporting data for a systematic literature review of space industry environmental impact

description: <b>Scoping SLR Data:</b> this file contains the results of the scoping SLR conducted on 26 Mar 2024. It provides the results for the critical appraisal (32 results) and It also contains the full results across the three databases which composed this SLR.<b>Second SLR Data:</b> this file contains the results of the second SLR conducted on 8 Aug 2024. It provides the results for the critical appraisal (252 results) and the results for the qualitative synthesis (21 results). It also contains the full results from each of the individual searches which composed this SLR.
DOI: 10.6084/m9.figshare.c.3625271_d3
title: MOESM2 of Controlling microbial contamination during hydrolysis of AFEX-pretreated corn stover and switchgrass: effects on hydrolysate composition, microbial response and fermentation

description: Additional file 2: Table S2. Average chemical genomic interaction scores for ACSH and ASGH produced by autoclaved (AC) or no-autoclaved (NAC) methods.
DOI: 10.6084/m9.figshare.c.3625277_d1
title: Table S2

description: Functional annotation analysis of genes coexpressed with PCDH gene clusters. The genes that coexpress with PCDH gene clusters were analyzed with regard to annotated function using DAVID (XLSX 21Â kb)
DOI: 10.6084/m9.figshare.c.3625268_d3
title: Additional file 1: Table S1. of Comparative genomic analysis of the WRKY III gene family in populus, grape, arabidopsis and rice

description: Detailed information about the 20 motifs in WRKY III proteins of poplar, grape, Arabidopsis, rice. (XLS 36 kb)
DOI: 10.6084/m9.figshare.c.3625268_d2
title: Additional file 3: Table S3. of Comparative genomic analysis of the WRKY III gene family in populus, grape, arabidopsis and rice

description: Synteny data in Populus, Grape, Arabidopsis, Rice, Clade1, Clade2, Clade3, Clade4. (XLS 95 kb)
DOI: 10.6084/m9.figshare.c.3625238_d6
title: Additional file 5: of Analysis of weighted co-regulatory networks in maize provides insights into new genes and regulatory mechanisms related to inositol phosphate metabolism

description: â  cornsilkâ   network and node annotation. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3625268_d1
title: Additional file 4: Table S4. of Comparative genomic analysis of the WRKY III gene family in populus, grape, arabidopsis and rice

description: List of primer sequences used for qRT-PCR analysis of the 10 poplar WRKY III genes. (XLS 30 kb)
DOI: 10.6084/m9.figshare.c.3625238_d4
title: Additional file 6: of Analysis of weighted co-regulatory networks in maize provides insights into new genes and regulatory mechanisms related to inositol phosphate metabolism

description: Sub-network 1 and 2 of â  dodgerblue4â   network, node annotation. (XLSX 9 kb)
DOI: 10.60656/d340826bc4004cf7
title: Custom collection of MWR brightness temperature data from Cabauw between 1 Jan 2023 and 12 Dec 2024
DOI: 10.6084/m9.figshare.c.3624704_d2
title: Additional file 7 of Improving RNA-Seq expression estimation by modeling isoform- and exon-specific read sequencing rate

description: Table S3. Description of 16 comparison cases for isoform expression validation in HBC data. This table shows the 16 comparison cases in HBC dataset. Each gene contains four comparison cases, among which two are from the same transcript with comparison between the two cell lines, and two from the same cell line with comparison between the two transcripts. (XLS 18.5 kb)
DOI: 10.6084/m9.figshare.c.3624698_d2
title: Additional file 1: of The mechanism of high contents of oil and oleic acid revealed by transcriptomic and lipidomic analysis during embryogenesis in Carya cathayensis Sarg.

description: Gene transcription in lipid synthesis. (XLSX 55 kb)
DOI: 10.6084/m9.figshare.c.3624698_d1
title: Additional file 2: of The mechanism of high contents of oil and oleic acid revealed by transcriptomic and lipidomic analysis during embryogenesis in Carya cathayensis Sarg.

description: Potential genes related with lipid synthesis via co-expression network. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.c.3624704_d1
title: Additional file 6 of Improving RNA-Seq expression estimation by modeling isoform- and exon-specific read sequencing rate

description: Table S2. Name list of the 279 genes used for comparison on DE analysis in MAQC data. This table shows the name list of the 279 qRT-PCR validated DE genes with high certainty, which are used to validate DE analysis approaches in MAQC data. (XLS 39.5 kb)
DOI: 10.6084/m9.figshare.c.3624650_d9
title: Additional file 6: of Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses

description: Identified targets of significant differential expressed novel miRNAs in flax. (XLS 22Â kb)
DOI: 10.6084/m9.figshare.c.3624650_d7
title: Additional file 5: of Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses

description: Summary of known miRNA and novel miRNA expression level in all samples. (XLS 81Â kb)
DOI: 10.6084/m9.figshare.c.3624650_d6
title: Additional file 2: of Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses

description: Summary of known miRNA and novel miRNA in each sample. (XLS 19Â kb)
DOI: 10.6084/m9.figshare.c.3624650_d5
title: Additional file 10: of Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses

description: The primers used in this study. (XLS 8Â kb)
DOI: 10.6084/m9.figshare.c.3624650_d4
title: Additional file 9: of Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses

description: Summary of data cleaning of degradome sequencing. (XLS 58Â kb)
DOI: 10.6084/m9.figshare.c.3624650_d3
title: Additional file 8: of Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses

description: GO ontology statistics of targets of known miRNAs and novel miRNAs having differential expression. (XLS 20Â kb)
DOI: 10.6084/m9.figshare.c.3624650_d2
title: Additional file 3: of Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses

description: Summary of intersample differential expression known miRNA and novel miRNA. (XLS 92Â kb)
DOI: 10.6084/m9.figshare.c.3624650_d1
title: Additional file 4: of Identification and characterization of miRNAs and targets in flax (Linum usitatissimum) under saline, alkaline, and saline-alkaline stresses

description: Summary of significant differential expressed novel miRNA. (XLS 32Â kb)
DOI: 10.15468/dl.txv4jc
title: Occurrence Download

description: A dataset containing 360917 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Observation.org, Nature data from around the World",
 "TaxonKey is Capreolus capreolus (Linnaeus, 1758)"
 ]
}

 The dataset includes 360917 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032623-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60656/5f469847ded949df
title: Custom collection of MWR brightness temperature data from Chilbolton between 17 Oct 2019 and 12 Dec 2024
DOI: 10.6084/m9.figshare.c.3624278_d9
title: Additional file 17: Table S8. of Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation

description: KEGG functions from metagenome data commonly identified in Wilcoxon rank sum test and sparse partial least squares analysis as related to methane yield against their occurrence in Hungate 1000 and other rumen-derived genomes available in the IMG database in June 2015. (XLSX 204Â kb)
DOI: 10.60656/3f50663656644820
title: Custom collection of MWR brightness temperature data from Cluj-Napoca between 3 Sep and 9 Dec 2024
DOI: 10.6084/m9.figshare.c.3624266_d3
title: Additional file 4: Table S1 of Decreased expression of the long noncoding RNA LINC00261 indicate poor prognosis in gastric cancer and suppress gastric cancer metastasis by affecting the epithelialâ  mesenchymal transition

description: Primers used for qRT-PCR and siRNA oligonucleotides. (XLS 16Â kb)
DOI: 10.6084/m9.figshare.c.3624266_d4
title: Additional file 1: Table S2 of Decreased expression of the long noncoding RNA LINC00261 indicate poor prognosis in gastric cancer and suppress gastric cancer metastasis by affecting the epithelialâ  mesenchymal transition

description: Clinical data of all patients involved in the study. (XLS 40Â kb)
DOI: 10.6084/m9.figshare.c.3624266_d1
title: Additional file 3: Table S4 of Decreased expression of the long noncoding RNA LINC00261 indicate poor prognosis in gastric cancer and suppress gastric cancer metastasis by affecting the epithelialâ  mesenchymal transition

description: Top-scoring genes which is enriched in the focal adhesion pathway according to LINC00261 expression. (XLS 10Â kb)
DOI: 10.6084/m9.figshare.c.3624242_d5
title: Additional file 7: Table S2. of Shifting patterns of genomic variation in the somatic evolution of papillary thyroid carcinoma

description: Shows ConsensusPathDB Pathway analysis. (XLSX 23Â kb)
DOI: 10.6084/m9.figshare.c.3624242_d6
title: Additional file 1: Table S1. of Shifting patterns of genomic variation in the somatic evolution of papillary thyroid carcinoma

description: Shows Patient Demographic and Clinical Information. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3624242_d2
title: Additional file 8: Table S3. of Shifting patterns of genomic variation in the somatic evolution of papillary thyroid carcinoma

description: Shows Single Nucleotide Substitutions in the MAPK Pathway. (XLSX 43Â kb)
DOI: 10.60656/032a7737096146a8
title: Custom collection of MWR brightness temperature data from Galați between 1 Sep and 12 Dec 2024
DOI: 10.6084/m9.figshare.c.3623750_d6
title: Additional file 12: of Evidence for contribution of common genetic variants within chromosome 8p21.2-8p21.1 to restricted and repetitive behaviors in autism spectrum disorders

description: Enrichment of functional annotation terms identified using DAVID software for genes linked to SNPs from ten results of phenotype-permuted datasets. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.c.3623750_d5
title: Additional file 10: of Evidence for contribution of common genetic variants within chromosome 8p21.2-8p21.1 to restricted and repetitive behaviors in autism spectrum disorders

description: Candidate gene list for Functional Enrichment Analysis. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3623750_d2
title: Additional file 3: of Evidence for contribution of common genetic variants within chromosome 8p21.2-8p21.1 to restricted and repetitive behaviors in autism spectrum disorders

description: Sample information for 2,588 individuals in SSC. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.c.3623744_d1
title: Additional file 1: Table S1. of Study on LOC426217 as a candidate gene for beak deformity in chicken

description: Genotypes of all the 171 beak-deformed and 164 normal birds in this study (XLSX 26 kb)
DOI: 10.6084/m9.figshare.c.3623675_d7
title: Additional file 2: of EST-based in silico identification and in vitro test of antimicrobial peptides in Brassica napus

description: The annotation with Gene ontology (GO) terms results of unigenes which matches to AMPs and the blast result against to the swissprot database with an E value cut-off equal or less than 10 â  5 using Blast2GO program. (XLSX 110Â kb)
DOI: 10.6084/m9.figshare.c.3623675_d6
title: Additional file 5: of EST-based in silico identification and in vitro test of antimicrobial peptides in Brassica napus

description: Thirty-one recombinant AMP activities test for Gramâ  +â  and Gram- strain halo diameter. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3623675_d4
title: Additional file 7: of EST-based in silico identification and in vitro test of antimicrobial peptides in Brassica napus

description: The PCR primers used in this work. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.c.3623675_d5
title: Additional file 1: of EST-based in silico identification and in vitro test of antimicrobial peptides in Brassica napus

description: Blast result of four B. napus ESTs dataset against to known AMPs. (XLSX 85Â kb)
DOI: 10.6084/m9.figshare.c.3623675_d3
title: Additional file 3: of EST-based in silico identification and in vitro test of antimicrobial peptides in Brassica napus

description: Figure S1-S7. Multiple sequence alignments of different AMPs families. Each of the resulting rough set of AMPs family sequence subgroups was separately realigned via Clustal W and via Jalview. S1: defesin family; S2: LTP family; S3: snakin family; S4: hevein family; S5: hipposin family; S6: thionin family; S7: unknown family. (ZIP 3830Â kb)
DOI: 10.6084/m9.figshare.c.3623675_d2
title: Additional file 4: of EST-based in silico identification and in vitro test of antimicrobial peptides in Brassica napus

description: Thirty-one Sequences of the AMP candidate for activities conform. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.c.3623678_d1
title: Additional file 1: of Increased concentrations of soluble B7-H3 and interleukin 36 in bronchoalveolar lavage fluid of Children with Mycoplasma pneumoniae pneumonia

description: Supporting data. (XLS 58 kb)
DOI: 10.6084/m9.figshare.27300615.v3
title: The Stereocontrolled Synthesis and NMR Analysis of PB/PO-Chimeric Oligonucleotides

description: The experimental procedures and supporting information (HPLC and UPLC profiles, copies of <sup>1</sup>H, <sup>13</sup>C, <sup>31</sup>P <sup>11</sup>B NMR, COSY, NOESY, ROESY, HSQC and HMBC spectra)<br>
DOI: 10.60656/d246b6d4ebf74688
title: Custom collection of MWR brightness temperature data from Granada between 12 Dec 2018 and 7 Dec 2024
DOI: 10.60656/be6c1888489f4b11
title: Custom collection of MWR brightness temperature data from Hyytiälä between 29 Jan 2021 and 12 Dec 2024
DOI: 10.6084/m9.figshare.c.3623138_d1
title: Additional file 2: of Release of extracellular vesicles containing small RNAs from the eggs of Schistosoma japonicum

description: Table S1. The list of schistosome small RNAs (over 100 reads) associated with S. japonicum egg extracellular vesicles (EVs). (XLSX 126Â kb)
DOI: 10.60656/398112828b2f44ad
title: Custom collection of MWR brightness temperature data from Jülich between 12 Dec 2018 and 12 Dec 2024
DOI: 10.6084/m9.figshare.c.3622730_d12
title: Additional file 6: of Mapping and validation of major quantitative trait loci for kernel length in wild barley (Hordeum vulgare ssp. spontaneum)

description: Linkage maps constructed using the Baudin/Awcs276 recombinant inbred line (RILs) population. (XLSX 60 kb)
DOI: 10.6084/m9.figshare.c.3622730_d11
title: Additional file 8: of Mapping and validation of major quantitative trait loci for kernel length in wild barley (Hordeum vulgare ssp. spontaneum)

description: Average kernel length of the Fleet/Awcs276 recombinant inbred line (RILs) population. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3622730_d10
title: Additional file 4: of Mapping and validation of major quantitative trait loci for kernel length in wild barley (Hordeum vulgare ssp. spontaneum)

description: Frequency distributions of kernel length in the Baudin/Awcs276 recombinant inbred line (RILs) population over the three years. (XLSX 26 kb)
DOI: 10.6084/m9.figshare.c.3622730_d9
title: Additional file 10: of Mapping and validation of major quantitative trait loci for kernel length in wild barley (Hordeum vulgare ssp. spontaneum)

description: Information regarding the peak marker within the interval of LEN-3H detected in 2015.. (XLSX 14 kb)
DOI: 10.60656/f303aef8e79245ca
title: Custom collection of MWR brightness temperature data from Lampedusa between 1 Jan and 11 Dec 2024
DOI: 10.6084/m9.figshare.c.3622376_d16
title: Additional file 2: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: The length distribution of unigenes and transcripts. (A) Transcript length distribution; (B) Unigene length distribution. (RAR 97 kb)
DOI: 10.6084/m9.figshare.c.3622376_d17
title: Additional file 16: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: KEGG pathway enrichment analysis of differentially expressed genes when peanut seeds respond to aflatoxin production by A. flavus. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3622376_d15
title: Additional file 8: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Primer information for genes used to validate the FPKM-based expression data using qRT-PCR. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3622376_d14
title: Additional file 13: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Hierarchical clustering of the differentially expressed unigenes in the peanut seeds. The blue, white, and red bands indicate low, intermediate, and high gene expression quantity, respectively. (RAR 2787 kb)
DOI: 10.6084/m9.figshare.c.3622376_d13
title: Additional file 11: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Differentially expressed unigenes analysis and annotation in each comparison. (XLSX 16087 kb)
DOI: 10.6084/m9.figshare.c.3622376_d11
title: Additional file 9: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Quantitative real-time PCR validations of the FPKM-based expression of unigenes by RNA-seq. Note: RE indicates relative expression levels of unigenes by qRT-PCR. (RAR 18 kb)
DOI: 10.6084/m9.figshare.c.3622376_d10
title: Additional file 12: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Number of DEGs in the control and A. flavus inoculated samples of peanut seeds. The numbers of DEGs in one sample or comparison are shown in each circle. The numbers of DEGs between the two samples or comparisons are shown in the overlapping regions. (RAR 118 kb)
DOI: 10.6084/m9.figshare.c.3622376_d8
title: Additional file 14: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Hierarchical clustering of the DEGs in two biological replicates of the peanut seeds. A, B and C showed the results of hierarchical clustering analysis at three culture time points, respectively. The blue, white, and red bands indicate low, intermediate, and high gene expression quantity, respectively. (RAR 110 kb)
DOI: 10.6084/m9.figshare.c.3622376_d7
title: Additional file 1: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Classification of raw reads. Raw reads including clean reads (purple), adapter sequences (green), reads containing undefined nucleotides (Nâ  s) (yellow), and low quality reads (orange) generated from Illumina RNA-sequencing (RNA-seq). (RAR 1485 kb)
DOI: 10.6084/m9.figshare.c.3622388_d4
title: Additional file 3: Table S3. of Transcriptome analysis of dormant tomonts of the marine fish ectoparasitic ciliate Cryptocaryon irritansÂ under lowÂ temperature

description: KEGG pathway enrichment analysis of the differently expressed genes among low temperature treated (B) and untreated (A, C) C. irritans tomonts. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3622376_d6
title: Additional file 6: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Statistics analysis of FPKM value of all unigenes. (XLSX 16479 kb)
DOI: 10.6084/m9.figshare.c.3622376_d5
title: Additional file 4: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Summary of the uniquely mapped reads in each library. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3622388_d3
title: Additional file 4: Table S4. of Transcriptome analysis of dormant tomonts of the marine fish ectoparasitic ciliate Cryptocaryon irritansÂ under lowÂ temperature

description: Differently expressed genes among low temperature treated (B) and untreated (A, C) C. irritans tomonts. (XLSX 188 kb)
DOI: 10.6084/m9.figshare.c.3622376_d4
title: Additional file 17: of Comparative transcript profiling of resistant and susceptible peanut post-harvest seeds in response to aflatoxin production by Aspergillus flavus

description: Expression analysis of peanut defense-related genes in response to aflatoxin production by A. flavus. (XLSX 373 kb)