cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/47d6a5773cd75f41f08dec4070387d82
title: Fire Temperatures: Biodiversity II:  Effects of Plant Biodiversity on Population and Ecosystem Processes

description: Biodiversity II (E120) is designed to determine how the number of plant species affects the dynamics of ecological processes at the population, community, and ecosystem levels. By experimentally manipulating the number of species and the kinds of species, the amount of plant growth and the change from year to year, that result can be examined. Plots are large (9m x 9m actively maintained) and well-replicated, allowing responses of plant pathogens, insect herbivores, seed predators, soil parameters, invasive plant species and other variables to also be studied. Plots were seeded in May 1994 to have 1, 2, 4, 8, or 16 species, with roughly 30 replicates of each diversity level. The species composition of each plot was chosen by random draw from a pool of 18 grassland perennials that included four warm-season (C4) grasses, four cool-season (C3) grasses, four legumes, four non-legume forbs, and two woody species. All species occur in monoculture allowing comparison of responses of each species in monoculture to combinations of these same species. The experiment was established in 1994 by the lead investigators David Tilman, Peter Reich, Johannes Knops, and David Wedin. Experiment 120 is similar to Experiment 123, but it uses larger plots to provide a large capacity for long-term subexperiments.
DOI: 10.17632/5kk6gzvvzr.1
title: Distance matrices used to investigate loggerhead sea turtle genetic structure.

description: The genetic structure of sea turtles nesting in the southeastern USA has been characterized extensively. Here we provide three distance matrices that we used to further investigate the population structure of loggerhead turtles this region. Because sea turtles use geomagnetic navigation to return to nest on their natal beaches, we might expect a relationship between the genetic differentiation between nesting beaches and the unique magnetic signatures that mark them. To investigate this idea we used the three distance matrices included here as well as previously reported metrics of genetic differentiation. Magnetic distance represents the difference in the magnetic signatures that have historically marked each of 20 nesting beaches across the southeastern USA. Geographic distance represents the shortest oversea distance between each possible combination of the 20 nesting beaches. Environmental distance represents the difference in the environmental characteristics at each of the 20 nesting beaches.
DOI: 10.17632/ph95d337dj.1
title: Server Scheduling Benchmark Instances

description: Data for job scheduling in a server. The data is divided into 5 ZIP files. Each zip file contains a collection of text files, where each file contains the information of all jobs arriving on a day to the server. The text file structure is as follows:  p  w  r  pr  The information in p, w, and r, follow the format of dictionaries in Python (job ID: information), whereas pr has the format of a Python list. The "results.xls" file, has 10 Excel sheets, with the best lower bound, and upper bound (i.e. schedule value) known for that instance. There are two sheets for each set of instances, one with the results considering release dates (ends in "wr") and one with the results without considering release dates (ends in "nr"). In all cases, the schedule was evaluated as total completion time, plus total energy consumption as described in "Resource Cost Aware Scheduling" by Carrasco, Iyengar, and Stein (https://doi.org/10.1016/j.ejor.2018.02.059).
DOI: 10.5281/zenodo.1194860
title: Vivolab Sys 3

description: VivoLab Sys 3
DOI: 10.17632/2drcj8mtbc.1
title: Databases of a clinico-ecological study of a triple epidemic

description: In these worksheets are exposed the tabulated raw data referring to the article "A clinico-ecological study of a triple epidemic: Zika, Dengue and Chikungunya"
DOI: 10.17632/7kpzswgdzf.2
title: Allosteric activation dictates PRC2 activity independent of its recruitment to chromatin. Lee et al.

description: Original data of this manuscript
DOI: 10.17632/y3ybyx47sx.2
title: Dataset for: Fusion of fibroblast growth factor 21 to a thermally responsive biopolymer forms an injectable depot with sustained anti-diabetic action

description: All raw data associated with the article, separated into individual tabs.
DOI: 10.4225/08/5aa1e2cc707b9
title: Parkes observations for project P892 semester 2017OCTS_BPSR_33

description: SUPERBx is an extension to the SUPERB survey which looks at the highest Galactic latitudes in a search for fast radio bursts (FRBs). We will focus our efforts at high Galactic latitudes where our previous work has shown FRB detectability to be as much as 3 times higher than in the plane. SUPERBx uses optimised GPU codes to search for pulsars and fast radio bursts (FRBs), making discoveries in real time. Handling our data as it comes in is essential for the SKA Phase I era so this work applies directly to the high-data rates of next generation telescopes. The FRBs discovered (we have already discovered five FRBs in this project) will have much more associated information than all previous detections. Firstly our discovery lag is ~1 second, rather than months/years. The Parkes observations will be shadowed by other radio telescopes (in particular the refurbished Molonglo which has now reached a level of performance where it has independently discovered 3 FRBs) to allow localisation of the discovered FRBs, and a host of optical and high-energy telescopes will then be triggered as appropriate. This is key for identifying FRB host galaxies, so as to solve the mystery of their progenitors and to exploit their many uses as tools for precision cosmology measurements.
DOI: 10.5281/zenodo.1194861
title: Vivolab Sys 3

description: VivoLab Sys 3
DOI: 10.17632/5k2x54hz2x.1
title: 2016_PM2_5

description: Data extracted from EPA site https://www.epa.gov/sites/production/files/2017-07/cbsafactbook2016.xlsx As in March 8th, 2018 The data has been modified to teach a lesson about data reprodicibility
DOI: 10.17632/ncjgvxjywd.1
title: Bio-inspired Hydro-Pressure Consolidation of Silica - Supplementary Material

description: Detailed studies related to Bio-Inspired Hydro-Pressure (HyPS) Consolidation of Silica. These studies comprehend a demonstration of the Ostwlad ripening participation in the dynamics of HyPS process, an assessment of the influence of process variables on the final consolidation of the samples, and an evaluation of the mechanical properties of HyPS samples, including Vickers micro-hardness and indentation fracture toughness
DOI: 10.17632/ncjgvxjywd.2
title: Bio-inspired Hydro-Pressure Consolidation of Silica - Supplementary Material

description: Detailed studies related to Bio-Inspired Hydro-Pressure (HyPS) Consolidation of Silica. These studies comprehend a demonstration of the Ostwlad ripening participation in the dynamics of HyPS process, an assessment of the influence of process variables on the final consolidation of the samples, and an evaluation of the mechanical properties of HyPS samples, including Vickers micro-hardness and indentation fracture toughness
DOI: 10.17632/y8p7yvkttw.1
title: Dataset for Alva Size 12 Form

description: Size 12 Alva Form Measurements data. Dress Form size code UMR-WMSK12H-1504, dress form code AVF58535 Size Stream SS20_3D Body Scanner
DOI: 10.5281/zenodo.1194538
title: Modeling Of The Yeast Nuclear Pore Complex

description: These scripts demonstrate the use of IMP in the modeling of the yeast NPC complex using diverse types of data as described in Seung Joong Kim, et al.'s 2018 NPC article published in Nature.
DOI: 10.5281/zenodo.1194539
title: Modeling Of The Yeast Nuclear Pore Complex

description: These scripts demonstrate the use of IMP in the modeling of the yeast NPC complex using diverse types of data as described in Seung Joong Kim, et al.'s 2018 NPC article published in Nature.
DOI: 10.6073/pasta/ff7123b1cb0ae1f66eab97f4e918406b
title: Soil nitrogen: Biodiversity II:  Effects of Plant Biodiversity on Population and Ecosystem Processes

description: Biodiversity II (E120) is designed to determine how the number of plant species affects the dynamics of ecological processes at the population, community, and ecosystem levels. By experimentally manipulating the number of species and the kinds of species, the amount of plant growth and the change from year to year, that result can be examined. Plots are large (9m x 9m actively maintained) and well-replicated, allowing responses of plant pathogens, insect herbivores, seed predators, soil parameters, invasive plant species and other variables to also be studied. Plots were seeded in May 1994 to have 1, 2, 4, 8, or 16 species, with roughly 30 replicates of each diversity level. The species composition of each plot was chosen by random draw from a pool of 18 grassland perennials that included four warm-season (C4) grasses, four cool-season (C3) grasses, four legumes, four non-legume forbs, and two woody species. All species occur in monoculture allowing comparison of responses of each species in monoculture to combinations of these same species. The experiment was established in 1994 by the lead investigators David Tilman, Peter Reich, Johannes Knops, and David Wedin. Experiment 120 is similar to Experiment 123, but it uses larger plots to provide a large capacity for long-term subexperiments.
DOI: 10.21227/tfzx-7y78
title: Brazilian Flights Dataset

description: An integrated dataset containing data on departure and arrival data for Brazilian domestic flights comprising the period from the years 2000 to 2019.Composed of 15,506,069 records of flight data, each containing 51 attributes. The attributes include data regarding the airline, flight, airports, meteorological conditions, and scheduled and real times of departure and arrival.
DOI: 10.5281/zenodo.1194862
title: Testsys

description: Result upload test
DOI: 10.5281/zenodo.1194372
title: Ws-Crr

description: DIHARD track1 ws-cr system (with R)
DOI: 10.5281/zenodo.1194547
title: Modeling Of The Yeast Nuclear Pore Complex

description: These scripts demonstrate the use of IMP in the modeling of the yeast NPC complex using diverse types of data as described in Seung Joong Kim, et al.'s 2018 NPC article published in Nature.

<strong>For more information</strong> about how to reproduce this modeling, see the Sali lab website or the README file.
DOI: 10.5281/zenodo.1194785
title: Ultraspeechdataset2017

description: Ultrasound/Audio databases related to (Fabre et al., Speech Communication, 2017) ——————————————————————

HOW-to-CITE: 

Fabre, D., Hueber, T., Girin, L., Alameda-Pineda, X., Badin, P., (2017) "Automatic animation of an articulatory tongue model from ultrasound images of the vocal tract", Speech Communication, vol. 93, pp. 63-75

These databases are distributed in the hope that they will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License for more details.

CONTENT: 

- (unzip first) Ultrasound/Audio data (synchronized) for three native French speakers (2 male speakers (PB and TH), one female speaker (DF)), recorded using Ultraspeech software (www.ultraspeech.com). Data acquisition protocol is described in (Fabre et al., Speech Communication, 2017). More information on the Ultraspeech acquisition system can be found at www.ultraspeech.com and in (Hueber et al., ISSP 2008). 

- audio_capture/, ultrasound_capture/ directories contain audio/ultrasound data (one folder per sentence).  Ultrasound data are 640x480 jpeg images (with 100% quality during compression) recorded at 60 fps. Audio files are in WAV format, 44.1 kHz, 32 bits. Text files in audio directory contain the text prompt for each recorded item. 

*** WARNING *** : Item 418 of speaker PB is missing. 

 

Thomas Hueber, Ph. D., CNRS researcher, GIPSA-lab (Grenoble, France), thomas.hueber@gipsa-lab.fr
DOI: 10.5281/zenodo.1194786
title: Ultraspeechdataset2017

description: Ultrasound/Audio databases related to (Fabre et al., Speech Communication, 2017) ——————————————————————

HOW-to-CITE: 

Fabre, D., Hueber, T., Girin, L., Alameda-Pineda, X., Badin, P., (2017) "Automatic animation of an articulatory tongue model from ultrasound images of the vocal tract", Speech Communication, vol. 93, pp. 63-75

These databases are distributed in the hope that they will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License for more details.

CONTENT: 

- (unzip first) Ultrasound/Audio data (synchronized) for three native French speakers (2 male speakers (PB and TH), one female speaker (DF)), recorded using Ultraspeech software (www.ultraspeech.com). Data acquisition protocol is described in (Fabre et al., Speech Communication, 2017). More information on the Ultraspeech acquisition system can be found at www.ultraspeech.com and in (Hueber et al., ISSP 2008). 

- audio_capture/, ultrasound_capture/ directories contain audio/ultrasound data (one folder per sentence).  Ultrasound data are 640x480 jpeg images (with 100% quality during compression) recorded at 60 fps. Audio files are in WAV format, 44.1 kHz, 32 bits. Text files in audio directory contain the text prompt for each recorded item. 

*** WARNING *** : Item 418 of speaker PB is missing. 

 

Thomas Hueber, Ph. D., CNRS researcher, GIPSA-lab (Grenoble, France), thomas.hueber@gipsa-lab.fr
DOI: 10.5281/zenodo.1194371
title: Ws-Crr

description: DIHARD track1 ws-cr system (with R)
DOI: 10.5281/zenodo.1194822
title: Raw

description: This is the system which uses raw speech .
DOI: 10.17632/v3r3dn8th8.1
title: SPSS Data for: Behavioral testing and litter effects in the rabbit

description: SPSS file.
DOI: 10.17632/d7c23zbvvv.1
title: Motif analysis of human ZNF343 using published Chip-exo data

description: For human ZNF343, to derive the extended motif besides the previously identified core motif GAAGCA, we searched this hexamer and found 3,237 intact binding sites within all those 4,532 binding peaks called by Trono lab (NCBI GEO GSE78099). Using this hexamer as the prefixed core (position 1-6), all flanking sequences within ±40bp ranges were extracted and aligned accordingly (from -39 to 46). For each particular site, all those raw Chip-exo reads (NCBI SRA SRX2512772) falling in its neighboring range were mapped based on the their starting positions, either in forward or reverse direction, thus the total Chip-exo reads for this site was calculated as the forward exo reads count (position -39 to +5) plus the reverse exo reads count (position +2 to 46). Ideally the Chip-exo reads count for each site should be proportional to the binding probability of that site, or approximately its binding affinity if the in vivo ZNF343 protein occupancy is low enough, therefore the negative logarithmic ratio of its Chip-exo reads was used as the relative binding energy for data regression and motif analysis.
DOI: 10.5281/zenodo.1194559
title: Accompanying Dataset For: A Monte Carlo Method For Metamorphic Testing Of Machine Translation Services

description: This is the original dataset, where white spaces are used to separate words of all languages. This is however not the best method of analyzing some Asian languages. Please refer to the following new version for enhanced, character-based analysis results:

Zhi Quan Zhou. (2018). Accompanying dataset for: A Monte Carlo Method for Metamorphic Testing of Machine Translation Services (Version 2.0) [Data set]. Zenodo. http://doi.org/10.5281/zenodo.1230139
DOI: 10.5281/zenodo.1194560
title: Accompanying Dataset For: A Monte Carlo Method For Metamorphic Testing Of Machine Translation Services

description: This is the original dataset, where white spaces are used to separate words of all languages. This is however not the best method of analyzing some Asian languages. Please refer to the following new version for enhanced, character-based analysis results:

Zhi Quan Zhou. (2018). Accompanying dataset for: A Monte Carlo Method for Metamorphic Testing of Machine Translation Services (Version 2.0) [Data set]. Zenodo. http://doi.org/10.5281/zenodo.1230139
DOI: 10.17632/6chch8vs6p.1
title: Data for: The importance of grass cover for mammalian diversity and habitat associations in a bush encroached savanna
DOI: 10.17632/7p3hr62bkk.1
title: Inter-specific competition of stiff-stemmed aquatic macrophytes in different flow rates of simulated water channels

description: Because of few studies discuss whether inter-floral competition occurs in aquatic macrophytes when they experience survival adversity such as a high flow rate. By simulating a river course, previous studies have found that the flow rate can affect the speed of growth, survival, leaf area, plant height, root length, and even stem diameters of emergent plants such as Oenanthe javanica, Hygrophila pogonocalyx, and Hygrophila salicifolia. Since plants are often mixed in a real water environment, in our study, we planted a mix of two Hygrophila species with the goal of exploring whether the response mechanism of Hygrophila to different flow rates is the same as when these species are planted alone. Meanwhile, we aimed to explore the differences and competition between different species of aquatic macrophytes when experiencing changes in flow. Furthermore, the growth speed and the soil protection effects of Hygrophila were studied in order to seek the optimal species and configuration. These data uploaded were used to compare the survival of Hygrophila at different flow rates, the growth rate of Hygrophila at different flow rates and the growth rate of Hygrophila at different flow rates.
DOI: 10.5281/zenodo.1194763
title: Dev-S

description: dev-s 1
DOI: 10.5281/zenodo.1194838
title: Fruiting Phenology Patterns Supplemental Files

description: Supplemental files from "Solar radiation and ENSO predict fruiting phenology patterns in a 15-year record from Kibale National Park, Uganda"
DOI: 10.5281/zenodo.1194839
title: Fruiting Phenology Patterns Supplemental Files

description: Supplemental files from "Solar radiation and ENSO predict fruiting phenology patterns in a 15-year record from Kibale National Park, Uganda"
DOI: 10.17632/5ys7zbwkbb.1
title: Data for: Does practicing a skill with the expectation of teaching alter motor preparatory cortical dynamics?

description: Data spreadsheet
DOI: 10.17632/vcgcpf4r76.1
title: Data For: Beach rock as sea level indicator: a case study at the coastline of Oman (Indian Ocean)

description: This dataset contains sedimentological and petrographical data that lead to a facies analysis on several beach rock outcrops. The aim was to show that sedimentological facies analysis can lower the vertical error that has to be assumed when reconstructing paleo sea level based on beach rock. The study area is located along the northeastern coastline of Oman and a key area for the investigation of beach rock. This is due to the geomorphology of the region. Twelve marine terraces are observed running parallel to the coastline. On many of these terraces, beach rocks are observed.
DOI: 10.5281/zenodo.1194762
title: Dev-S

description: dev-s 1
DOI: 10.3886/e101105v1-5201
title: Growing Wealth Gaps in Education

description: Prior research on trends in educational inequality has focused chiefly on changing gaps in educational attainment by family income or parental occupation. In contrast, this contribution provides the first assessment of trends in educational attainment by family wealth and suggests that we should be at least as much concerned about growing wealth gaps in education. Despite overall growth in educational attainment and some signs of decreasing wealth gaps in high school attainment and college access, I find a large and rapidly increasing wealth gap in college attainment between cohorts born in the 1970 and 1980s, respectively. This growing wealth gap in higher educational attainment co-occurred with a rise in inequality in children's wealth backgrounds, though the analyses also suggest that the latter does not fully account for the former. Nevertheless, the results reported here raise concerns about the distribution of educational opportunity among today's children who grow up in a context of particularly extreme wealth inequality.
DOI: 10.7487/2018.68.1.1120
title: Chongyuan Mao

description: Update to B5 tot dia, dino and pci
DOI: 10.5281/zenodo.1194576
title: Meshes Of The Rpi Formula Hybrid Suspension Upright

description: Meshes generated with Simmetrix SimModSuite and converted to PUMI/MDS using PUMI (d7ec4ca)
DOI: 10.5281/zenodo.1194828
title: Testsys

description: Result upload test
DOI: 10.5281/zenodo.1194575
title: Meshes Of The Rpi Formula Hybrid Suspension Upright

description: Meshes generated with Simmetrix SimModSuite and converted to PUMI/MDS using PUMI (d7ec4ca)
DOI: 10.15129/cf3c8924-85a9-4813-8896-48ba7dbe3fe4
title: Data for: "Centralities in Simplicial Complexes. Applications to Protein Interaction Networks"

description: The data set consists of matlab code files, which are the .m files and require matlab to process them. The data set for the paper "Centralities in Simplicial Complexes. Applications to Protein Interaction Networks"
DOI: 10.15785/sbgrid/484
title: X-Ray Diffraction data from Human biliverdin IX beta reductase, source of 5OOG structure

description: X-Ray Diffraction data from human biliverdin IX beta reductase - phloxine B complex, source of 5OOG structure - low resolution pass
DOI: 10.15785/sbgrid/485
title: X-Ray Diffraction data from Human biliverdin IX beta reductase, source of 5OOG structure

description: X-Ray Diffraction data from human biliverdin IX beta reductase - phloxine B complex, source of 5OOG structure - high resolution pass
DOI: 10.15785/sbgrid/486
title: X-Ray Diffraction data from Human biliverdin IX beta reductase, source of 5OOH structure

description: X-Ray Diffraction data from human biliverdin IX beta reductase - erythrosine extra bluish complex, source of 5OOH structure - low resolution pass
DOI: 10.17632/xpkwrm7kpd.1
title: Data for: A tale of two landscapes: which landscape quality metrics are truly ransferable?
DOI: 10.5281/zenodo.1194829
title: Front-End System2

description: This is the system which uses traditional source separation methods. It's different from system1.
DOI: 10.5285/3952a4fe-683a-42e7-a074-bdec41c8ab16
title: Southern Hemisphere tropospheric westerly jet: 1979-present

description: This dataset documents the trends and variability in the latitude and strength of the belt of lower-atmosphere westerly winds over the Southern Ocean, referred to as the 'westerly jet'. Time series of annual mean and seasonal diagnostics are available for the period 1979-present, specifically time series of seasonal and annual mean jet latitude and strength. The diagnostics are derived from the European Centre for Medium Range Weather Forecasts (ECMWF) ERA-Interim reanalysis (for more information see www.ecmwf.int and Dee et al. (2011)), which is an observationally-constrained reconstruction of atmospheric conditions. The broad characterisation of the westerly winds into these simple diagnostics has been found to be useful for understanding long-term climate change due to contrasting drivers of change and impacts on other aspects of the climate system. 

This is an index of winds around the full circumference of all longitudes at Southern Hemisphere middle latitudes. The exact latitude depends on the position of the jet at any given time, but on average the jet (the core of the westerlies) is located at approximately 52 deg S.
description: The files' names refer to seasonal or annual data of the latitude or strength of the jet, where:
      ann = Annual
      djf = December January February
      mam = March April May
      jja = June July August
      son = September October November