cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.bkxfeu
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Baphia breteleriana Soladoye"
 ]
}

 The dataset includes 23 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041078-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nnprjt
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tandonia kusceri (H.Wagner, 1931))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 90 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041079-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3v7ztf
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Baphia dewildeana Soladoye"
 ]
}

 The dataset includes 15 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041080-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wffqh4
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tapinoma darioi Seifert, D'Eustacchio, Kaufmann, Centorame, Lorite & Modica, 2017)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 36 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041081-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23729/08283750-30ed-4846-9f94-7a8b197bb758
title: Molecular dynamics simulations reveal how vinculin refolds partially unfolded talin rod helices to stabilize them against mechanical force

description: Molecular dynamics data files related to article Mykuliak et al. "Molecular dynamics simulations reveal how vinculin refolds partially unfolded talin rod helices to stabilize them against mechanical force" published in PLOS Computational Biology 2024
DOI: 10.15468/dl.c9jmtp
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tapinoma ibericum Santschi, 1925)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 16 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041082-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jese9r
title: Occurrence Download

description: A dataset containing 158 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tapinoma magnum Mayr, 1861)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 158 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041083-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5518/539
title: Domain Wall Motion and Interfacial Dzyaloshinskii-Moriya Interactions in Pt/Co/Ir(tIr)/Ta Multilayers - dataset

description: Domain Wall Motion and Interfacial Dzyaloshinskii-Moriya Interactions in Pt/Co/Ir(tIr)/Ta Multilayers - dataset. We give the data in two forms. The .zip files contain raw experimental data for each technique. The .opj files contain Origin plots of processed data corresponding to the figures in the paper.
DOI: 10.15468/dl.grq84k
title: Occurrence Download

description: A dataset containing 4820 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Culcita macrocarpa C.Presl"
 ]
}

 The dataset includes 4820 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041084-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26395513
title: Supplementary Material for: Effect of Hydration with Bicarbonate Ringer’s Solution on Cisplatin-induced Acute Kidney Injury in Patients with Esophageal Cancer: A Retrospective Cohort Study

description: Introduction: Cisplatin (CDDP) often causes acute kidney injury (AKI), and magnesium supplementation has been suggested to be important in preventing CDDP-induced AKI. Sodium bicarbonate Ringer’s solution (BRS) is a crystalloid solution composed of various electrolytes, including Mg2+, and can be generally used to supplement missing extracellular fluid and correct metabolic acidosis; however, the clinical outcomes of hydration with BRS for CDDP-induced AKI remain unclear. In this study, we retrospectively compared the effects of BRS and normal saline for hydration in patients undergoing CDDP treatment.
Methods: We analyzed the incidence rate of AKI (grade ≥ 1), the severity of AKI, the serum magnesium level, and the incidence rate of grade ≥ 3 hematological toxicities (leukopenia, neutropenia, anemia, or thrombocytopenia) following CDDP and fluorouracil (5-FU) administration in 131 in-patients who received CDDP and 5-FU for the first time to treat esophageal cancer.
Results: Fifty-six patients (43%) received saline alone, while 75 patients (57%) received BRS for hydration. The incidence rate of AKI (grade ≥ 1) was significantly lower in the BRS group (11%) than that in the saline group (39%, p &lt; 0.001). Moreover, severe AKI (grade ≥ 2) was significantly less common in the BRS group than in the saline group. Although the serum magnesium levels before CDDP administration were not significantly different between the two groups (p = 0.939), the serum magnesium levels on days 2–3 after CDDP administration in the BRS group were significantly higher than those in the saline group (p &lt; 0.001). In contrast, there were no significant differences in the incidence rates of hematological toxicity between the two groups. Multivariate analysis revealed that BRS use was an independent factor that significantly contributed to AKI prevention (odds ratio = 0.061, p &lt; 0.001).
Conclusion: Hydration with BRS could prevent CDDP-induced AKI in patients with esophageal cancer.
DOI: 10.15468/dl.qu9v35
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Taraxacum khatoonae Abedin)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041085-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13121385
title: eurillas_latirostris_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.13121386
title: eurillas_latirostris_zanfona_1.fasta.gz

description: .
DOI: 10.22000/1812
title: JadhavJGR2023
title: Quasi 16-day wave signatures in the inter-hemispheric field aligned currents: A new perspective toward atmosphere-ionosphere coupling

description: Data to reproduce the figures in publication.
DOI: 10.5281/zenodo.13121395
title: gomphosus_varius_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.13121396
title: gomphosus_varius_zanfona_1.fasta.gz

description: .
DOI: 10.15468/dl.5tg4dg
title: Occurrence Download

description: A dataset containing 9904 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Taraxacum erythrospermum Andrz. ex Besser)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 9904 records from 235 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041086-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9058806
title: e-IPO Data - Investment
DOI: 10.5517/ccdc.csd.cc2j422v
title: CCDC 2327606: Experimental Crystal Structure Determination

description: Related Article: Jiaxin Lou, Lulin Xu, Wanting Ju, Dong Wang, Tianlin Cheng, Weiguo Zhu, Ning Su, Junqiao Ding|2024|J.Mater.Chem.C|12|10660|doi:10.1039/D4TC01841A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j423w
title: CCDC 2327607: Experimental Crystal Structure Determination

description: Related Article: Jiaxin Lou, Lulin Xu, Wanting Ju, Dong Wang, Tianlin Cheng, Weiguo Zhu, Ning Su, Junqiao Ding|2024|J.Mater.Chem.C|12|10660|doi:10.1039/D4TC01841A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jdjq6
title: CCDC 2335748: Experimental Crystal Structure Determination

description: Related Article: Qian-Ru Sun, Dan Luo, Yaokang Lv, Wei-Hui Fang, Jian Zhang|2024|Chem.Commun.|60|7574|doi:10.1039/D4CC01611D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jdjr7
title: CCDC 2335749: Experimental Crystal Structure Determination

description: Related Article: Qian-Ru Sun, Dan Luo, Yaokang Lv, Wei-Hui Fang, Jian Zhang|2024|Chem.Commun.|60|7574|doi:10.1039/D4CC01611D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jftng
title: CCDC 2336986: Experimental Crystal Structure Determination

description: Related Article: Qian-Ru Sun, Dan Luo, Yaokang Lv, Wei-Hui Fang, Jian Zhang|2024|Chem.Commun.|60|7574|doi:10.1039/D4CC01611D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.rzqvjz
title: Occurrence Download

description: A dataset containing 10946 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Taraxacum officinale Weber)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 10946 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041087-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2kpkzt
title: CCDC 2374227: Experimental Crystal Structure Determination

description: Related Article: le zhang|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.ktdgrq
title: Occurrence Download

description: A dataset containing 3666 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1019.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Larix kaempferi (Lamb.) Carrière"
 ]
}

 The dataset includes 3666 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041088-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.scg275
title: Occurrence Download

description: A dataset containing 663593 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diptera",
 "Country is Norway",
 "HasCoordinate is true",
 "Year is greater than or equal to 2005",
 "Year is less than or equal to 2024",
 "CoordinateUncertaintyInMeters is less than or equal to 100"
 ]
}

 The dataset includes 663593 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041069-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ayc3qf
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Taraxacum)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041089-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26395579
title: Supplementary Material for: A complete response to combined immunotherapy in a patient with an ATM plus SF3B1 mutation and a moderate tumor mutational burden with a high-grade treatment-emergent neuroendocrine prostate cancer (T-NEPC): Case report and review of the literature

description: Introduction: High-grade treatment-emergent neuroendocrine prostate cancer (T-NEPC) is a rare subtype of prostate cancer with limited therapeutic options and poor prognosis. Understanding biomarkers that influence the efficacy of immune checkpoint inhibitors (IO) is vital to form a better therapeutic arsenal for these patients. Case presentation: We describe an impressive response to IO combination immunotherapy with ipilimumab plus nivolumab (Ipi/nivo) in a patient with T-NEPC who had failed standard treatment approaches. The patient was showing signs of a rapid decline in quality of life despite his prostate-specific antigen (PSA) levels remaining undetectable and had no previous response to standard therapies. The results of the next sequencing generation (NGS) DNA analysis demonstrated the presence of intermediary tumor burden, an ATM mutation and a rare SF3B1 (G742D) mutation, and served as rational for IO therapy in this patient . Conclusions: This case highlights the genetic profile of tumor with a rare combination of ATM and SF3B1 mutations that could be further explored as biomarkers for IO therapy in T-NEPC and other tumor types.
DOI: 10.6084/m9.figshare.26395579.v1
title: Supplementary Material for: A complete response to combined immunotherapy in a patient with an ATM plus SF3B1 mutation and a moderate tumor mutational burden with a high-grade treatment-emergent neuroendocrine prostate cancer (T-NEPC): Case report and review of the literature

description: Introduction: High-grade treatment-emergent neuroendocrine prostate cancer (T-NEPC) is a rare subtype of prostate cancer with limited therapeutic options and poor prognosis. Understanding biomarkers that influence the efficacy of immune checkpoint inhibitors (IO) is vital to form a better therapeutic arsenal for these patients. Case presentation: We describe an impressive response to IO combination immunotherapy with ipilimumab plus nivolumab (Ipi/nivo) in a patient with T-NEPC who had failed standard treatment approaches. The patient was showing signs of a rapid decline in quality of life despite his prostate-specific antigen (PSA) levels remaining undetectable and had no previous response to standard therapies. The results of the next sequencing generation (NGS) DNA analysis demonstrated the presence of intermediary tumor burden, an ATM mutation and a rare SF3B1 (G742D) mutation, and served as rational for IO therapy in this patient . Conclusions: This case highlights the genetic profile of tumor with a rare combination of ATM and SF3B1 mutations that could be further explored as biomarkers for IO therapy in T-NEPC and other tumor types.
DOI: 10.5281/zenodo.13121415
title: otus_manadensis_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.13121416
title: otus_manadensis_zanfona_1.fasta.gz

description: .
DOI: 10.15468/dl.s5wnvc
title: Occurrence Download

description: A dataset containing 127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tarenaya aculeata (L.) Soares Neto & Roalson)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 127 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041090-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12744804
title: PyRAMD scheme: a protocol for computing the infrared spectra of polyatomic molecules using ab initio molecular dynamics

description: Here are illustrative examples of how to compute molecular-dynamics-based vibrational infrared spectra of polyatomic molecules using PyRAMD software.

The dataset includes the version of the software used (PyRAMD from https://gitlab.desy.de/denis.tikhonov/pyramd, obtained July 15, 2024) for running molecular dynamics (MD) and various examples of MD simulations that illustrate various analysis issues. The large-time-step correction applicability is shown with methane (CH4) as an example. The applicability of the regularized least-squares spectral analysis is demonstrated in the case of carbon dioxide (CO2). The scale factors for the MD are obtained using water, ammonia, methane, ethane, methylamine, and methanol as the training set of molecules. The scale factors were obtained at the BLYP-D3(BJ)/6-31G,  PBE-D3(BJ)/6-31G, and PBEh-3c levels of theory. The whole procedure was demonstrated with protonated methane as a test case.
DOI: 10.5281/zenodo.12744805
title: PyRAMD scheme: a protocol for computing the infrared spectra of polyatomic molecules using ab initio molecular dynamics

description: Here are illustrative examples of how to compute molecular-dynamics-based vibrational infrared spectra of polyatomic molecules using PyRAMD software.

The dataset includes the version of the software used (PyRAMD from https://gitlab.desy.de/denis.tikhonov/pyramd, obtained July 15, 2024) for running molecular dynamics (MD) and various examples of MD simulations that illustrate various analysis issues. The large-time-step correction applicability is shown with methane (CH4) as an example. The applicability of the regularized least-squares spectral analysis is demonstrated in the case of carbon dioxide (CO2). The scale factors for the MD are obtained using water, ammonia, methane, ethane, methylamine, and methanol as the training set of molecules. The scale factors were obtained at the BLYP-D3(BJ)/6-31G,  PBE-D3(BJ)/6-31G, and PBEh-3c levels of theory. The whole procedure was demonstrated with protonated methane as a test case.
DOI: 10.6084/m9.figshare.25954027.v2
title: A compendium of synthetic lethal gene pairs defined by extensive combinatorial pan-cancer CRISPR screening

description: To be confirmed
DOI: 10.34740/kaggle/dsv/9031440
title: Heart Disease Dataset
DOI: 10.15468/dl.nscn5g
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tarenaya diffusa (Banks ex DC.) Soares Neto & Roalson)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041091-240626123714530/datasets/export for details.
DOI: 10.15468/dl.fmu8wz
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Schoeniparus dubius (Hume, 1874)",
 "Year 2000-2024"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041093-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57nub8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tarenaya guaranitica (Chodat & Hassl.) Soares Neto & Roalson)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041094-240626123714530/datasets/export for details.
DOI: 10.15468/dl.wr2gr9
title: Occurrence Download

description: A dataset containing 2830 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tarenaya houtteana (Schltdl.) Soares Neto & Roalson)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 2830 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041095-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.