cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.u4jsrf
title: Occurrence Download

description: A dataset containing 2337 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Machilus zuihoensis)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2337 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060660-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30016222
title: Flat-band quantum materials empowering self-adapted ultrabroadband detectors

description: It is the source data of the figures in the paper
DOI: 10.6084/m9.figshare.30016222.v1
title: Flat-band quantum materials empowering self-adapted ultrabroadband detectors

description: It is the source data of the figures in the paper
DOI: 10.5281/zenodo.17292242
title: Zenodo package for Y. Wang et al. 2025, A&A --- Warm absorber outflows in radio-loud active galactic nucleus 3C 59

description: The supplementary package here contains the XMM-Newton data, SPEX scripts, and Python codes to reproduce the spectral fitting results and figures in the paper (Y. Wang et al. 2025, A&A --- Warm absorber outflows in radio-loud active galactic nucleus 3C 59).
DOI: 10.5281/zenodo.17292243
title: Zenodo package for Y. Wang et al. 2025, A&A --- Warm absorber outflows in radio-loud active galactic nucleus 3C 59

description: The supplementary package here contains the XMM-Newton data, SPEX scripts, and Python codes to reproduce the spectral fitting results and figures in the paper (Y. Wang et al. 2025, A&A --- Warm absorber outflows in radio-loud active galactic nucleus 3C 59).
DOI: 10.6084/m9.figshare.28669343
title: Within-host pneumococcal serotype 3 genetic diversity and evolution during a one-year prolonged carriage episode in a healthy adult

description: This dataset is longitudinal, microbiological, genomic, and epidemiological. It comprises multiple types of biological and clinical data collected from asymptomatic adults in Malawi over a 12-month study period. Below is a detailed classification of the data:

Study Design & Recruitment Data
Longitudinal, cohort-based clinical data. To track pneumococcal carriage persistence and clearance over time.
- Participant recruitment, screening procedures, inclusion criteria (adults, aged 18-45, living with children under 5), and follow-up schedule (days 3, 7, 14, 21, 28, then monthly for 12 months).

Microbiological & Culture Data
Laboratory-based microbiological data. To confirm the presence of Streptococcus pneumoniae and quantify bacterial density (CFU/mL).
- Nasopharyngeal sample collection, standard culture methods (WHO guidelines), pneumococcal identification via morphology, optochin sensitivity, bile solubility tests, and serotyping using latex agglutination.

Antimicrobial Resistance (AMR) Data
Antibiotic susceptibility testing data. To characterise multidrug resistance (MDR), defined as non-susceptibility to ≥3 antibiotic classes.
- Disk diffusion and Etest MICs to determine resistance to beta-lactams, macrolides, tetracyclines, and co-trimoxazole following EUCAST guidelines.

Whole Genome Sequencing (WGS) & Genomic Data
High-throughput sequencing data. To analyse pneumococcal genetic diversity, detect recombination events, and establish lineage relationships with global pneumococcal genomes.
- DNA extraction & quality control (Qubit quantification, threshold &gt;2.5 μg)
- Illumina NovaSeq 6000 sequencing (150 bp paired-end reads, 1.8M reads per sample).
- Genome assembly & quality metrics (QUAST, contig number &lt;500, genome size 1.9–2.35 Mb).
- Phylogenetics & population structure (RAxML, Gubbins, PopPUNK, GPSC lineage assignment).
- Pan-genome analysis (Prokka, Panaroo, Phandango).

Capsular Locus & Serotyping Data
Molecular epidemiology data. To determine serotype distribution and confirm multiple serotypes in cases of co-colonization.
- Capsular polysaccharide genes (Serotype 3 reference: CR931634)
- Serotyping pipelines (SeroBA, SeroCall)

Mobile Genetic Elements (MGE) & Resistance Gene Analysis
Mobile genetic element (MGE) annotation data. To detect transposable elements (e.g., Tn5253), which may contribute to antimicrobial resistance.
- ICEfinder, Geneious Prime, Artemis for MGE annotation
- Resistance genes were identified using ABRicate, CARD database, and Pathogen Watch CDC pipeline.

Minority Variant & Intrahost Evolution Data
Variant calling and within-host evolution data:
To track minority variants, which indicate within-host pneumococcal evolution.
- LoFreq for low-frequency variant calling.
- GATK for base quality recalibration.
- Filtering criteria: ≥20X coverage, allele frequency 0.15-0.50.
DOI: 10.6084/m9.figshare.28669343.v1
title: Within-host pneumococcal serotype 3 genetic diversity and evolution during a one-year prolonged carriage episode in a healthy adult

description: This dataset is longitudinal, microbiological, genomic, and epidemiological. It comprises multiple types of biological and clinical data collected from asymptomatic adults in Malawi over a 12-month study period. Below is a detailed classification of the data:

Study Design & Recruitment Data
Longitudinal, cohort-based clinical data. To track pneumococcal carriage persistence and clearance over time.
- Participant recruitment, screening procedures, inclusion criteria (adults, aged 18-45, living with children under 5), and follow-up schedule (days 3, 7, 14, 21, 28, then monthly for 12 months).

Microbiological & Culture Data
Laboratory-based microbiological data. To confirm the presence of Streptococcus pneumoniae and quantify bacterial density (CFU/mL).
- Nasopharyngeal sample collection, standard culture methods (WHO guidelines), pneumococcal identification via morphology, optochin sensitivity, bile solubility tests, and serotyping using latex agglutination.

Antimicrobial Resistance (AMR) Data
Antibiotic susceptibility testing data. To characterise multidrug resistance (MDR), defined as non-susceptibility to ≥3 antibiotic classes.
- Disk diffusion and Etest MICs to determine resistance to beta-lactams, macrolides, tetracyclines, and co-trimoxazole following EUCAST guidelines.

Whole Genome Sequencing (WGS) & Genomic Data
High-throughput sequencing data. To analyse pneumococcal genetic diversity, detect recombination events, and establish lineage relationships with global pneumococcal genomes.
- DNA extraction & quality control (Qubit quantification, threshold &gt;2.5 μg)
- Illumina NovaSeq 6000 sequencing (150 bp paired-end reads, 1.8M reads per sample).
- Genome assembly & quality metrics (QUAST, contig number &lt;500, genome size 1.9–2.35 Mb).
- Phylogenetics & population structure (RAxML, Gubbins, PopPUNK, GPSC lineage assignment).
- Pan-genome analysis (Prokka, Panaroo, Phandango).

Capsular Locus & Serotyping Data
Molecular epidemiology data. To determine serotype distribution and confirm multiple serotypes in cases of co-colonization.
- Capsular polysaccharide genes (Serotype 3 reference: CR931634)
- Serotyping pipelines (SeroBA, SeroCall)

Mobile Genetic Elements (MGE) & Resistance Gene Analysis
Mobile genetic element (MGE) annotation data. To detect transposable elements (e.g., Tn5253), which may contribute to antimicrobial resistance.
- ICEfinder, Geneious Prime, Artemis for MGE annotation
- Resistance genes were identified using ABRicate, CARD database, and Pathogen Watch CDC pipeline.

Minority Variant & Intrahost Evolution Data
Variant calling and within-host evolution data:
To track minority variants, which indicate within-host pneumococcal evolution.
- LoFreq for low-frequency variant calling.
- GATK for base quality recalibration.
- Filtering criteria: ≥20X coverage, allele frequency 0.15-0.50.
DOI: 10.15468/dl.y9ngwz
title: Occurrence Download

description: A dataset containing 131 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hibiscus vitifolius",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 131 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060661-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27189843
title: Hierarchical parafoveal processing in reading

description: Raw MEG data (.fif file, each participant has multiple files), eye movement data( .edf) and Psychotoolbox data (.mat). For instance, for the first participant, the Psychtoolbox data is 20220917_b59f.mat, the eye movement data is 0917b59f.edf, the MEG data is b59f.fif
DOI: 10.6084/m9.figshare.27189843.v1
title: Hierarchical parafoveal processing in reading

description: Raw MEG data (.fif file, each participant has multiple files), eye movement data( .edf) and Psychotoolbox data (.mat). For instance, for the first participant, the Psychtoolbox data is 20220917_b59f.mat, the eye movement data is 0917b59f.edf, the MEG data is b59f.fif
DOI: 10.5281/zenodo.17275696
title: Geographical word lists for pedagogical purposes

description: The dataset was created for the purposes of the author's PhD thesis, titled “Teaching English Geographical Vocabulary with the Use of a Corpus-based List and Pedagogical Translation”, supervised by Monika Kavalir and Darja Mertelj. Part of the study was published in the journal English for Specific Purposes in an academic paper titled “Compiling a Custom Corpus and Word List for ESAP: The Case of English for Geographers”, authored by Andreja Drašler and Monika Kavalir.

The dataset includes four word lists:

1.      Geographical word list for pedagogical purposes – single words (ranked by keyness score)

2.      Geographical word list for pedagogical purposes – multi-word items (ranked by keyness score)

3.      Geographical word list for pedagogical purposes – single words (ranked by document frequency)

4.      Geographical word list for pedagogical purposes – multi-word items (ranked by document frequency)
DOI: 10.15468/dl.jhds3m
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coraciiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((150 30,180 30,180 60,150 60,150 30))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060663-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jsfnxd
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Deutzia mexicana"
 ]
}

 The dataset includes 61 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060664-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8eb95a
title: Occurrence Download

description: A dataset containing 23734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Podicipediformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((60 30,90 30,90 60,60 60,60 30))"
 ]
}

 The dataset includes 23734 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060665-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7807/immo:redx:puf:v14
title: Regional Real Estate Price Index for Germany - PUF, 2008-05/2024
title: Regional Real Estate Price Index for Germany - PUF, 2008-05/2024
title: Version 14

description: Based on the RWI-GEO-RED data that base on the data provided by ImmobilienScout24 hedonic housing price indices are estimated. The indices are on the grid level, LMR, district/county and municipality level. We conduct a hedonic price regression that covers characteristics of the object as well as regional fixed effects. The hedonic regression is estimated separately for houses for sale as well as apartments for rent and for sale. We also offer a combined index which combines the individual housing types into one index. There are three different specifications: First, the overall time development from 01/2008 to 05/2024 on grid level given yearly and quaterly; Second, cross-regional differences for each year separately and time development within one region from 01/2018 to 05/2024 (municipality, district, LMR, and grid level); third, the time-region fixed effect between 2008 and 2024, which is used to determine the price changes for all three region types to the base year of 2008.
description: Based on the RWI-GEO-RED data that base on the data provided by ImmobilienScout24 hedonic housing price indices are estimated. The indices are on the grid level, LMR, district/county and municipality level. We conduct a hedonic price regression that covers characteristics of the object as well as regional fixed effects. The hedonic regression is estimated separately for houses for sale as well as apartments for rent and for sale. We also offer a combined index which combines the individual housing types into one index. There are three different specifications: First, the overall time development from 01/2008 to 05/2024 on grid level given yearly and quaterly; Second, cross-regional differences for each year separately and time development within one region from 01/2018 to 05/2024 (municipality, district, LMR, and grid level); third, the time-region fixed effect between 2008 and 2024, which is used to determine the price changes for all three region types to the base year of 2008.
description: RWI-GEO-REDX
description: RWI-GEO-REDX
description: Other
description: The data is based on the data set RWI-GEO-RED, that collects all offers for private housing on ImmobilienScout24 between January 2008 and May 2024. ImmobilienScout24 is the largest listing website for real estate in Germany. The price indices are estimated labor market region, district and municipality level
description: The data is based on the data set RWI-GEO-RED, that collects all offers for private housing on ImmobilienScout24 between January 2008 and May 2024. ImmobilienScout24 is the largest listing website for real estate in Germany. The price indices are estimated labor market region, district and municipality level
description: Stratified random sampling
DOI: 10.15468/dl.h465mc
title: Occurrence Download

description: A dataset containing 1147627 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Botany (UPS)"
 ]
}

 The dataset includes 1147627 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060647-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7488/ds/7815
title: Klebsiella pneumoniae dataset

description: This dataset of Klebsiella pneumonia contains 1000 genome files randomly selected from NCBI. This dataset was built for comparative analysis with the Klebsiella variicola dataset.
DOI: 10.15468/dl.4kg9kv
title: Occurrence Download

description: A dataset listing the 5429 species recorded in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is 2498d55c-dcd2-4caf-abb7-14f2ffe05c37",
 "TaxonKey is Animalia"
 ]
}

 The dataset's 5429 records were derived from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060640-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.49fxxk
title: Occurrence Download

description: A dataset listing the 158 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Antarctica",
 "Country is one of (Antarctica, South Georgia and the South Sandwich Islands, French Southern Territories, Heard Island and McDonald Islands, Falkland Islands (Malvinas), Australia, South Africa)",
 "Geometry POLYGON((-180 -90,180 -90,180 -19,-180 -19,-180 -90))",
 "TaxonKey is Poales"
 ]
}

 The dataset's 158 records were derived from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060627-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tgusvs
title: Occurrence Download

description: A dataset containing 25137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Maclura pomifera)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 25137 records from 254 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060668-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.duw7r9
title: Occurrence Download

description: A dataset containing 206 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trisidos tortuosa",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is one of (Absent)"
 ]
 }
 }
 ]
}

 The dataset includes 206 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060670-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2t5k3y
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kleinhovia hospita",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 54 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060671-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mxq2qh
title: Occurrence Download

description: A dataset containing 16155 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera leo"
 ]
}

 The dataset includes 16155 records from 178 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060651-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kjssvt
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kleinhovia hospita",
 "Country is Seychelles",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060674-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2p2778
title: CCDC 2474799: Experimental Crystal Structure Determination

description: Related Article: Markus Vorholt, Alex J. Corkett, Andreas Drichel, Lucie M. Lindenbeck, Adam Slabon, Richard Dronskowski|2025|Chem.Mater.|||doi:10.1021/acs.chemmater.5c01984
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.nrz8t8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kleinhovia hospita",
 "Country is North Macedonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060672-250920141307145/datasets/export for details.
DOI: 10.15468/dl.dmrnrg
title: Occurrence Download

description: A dataset containing 270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coraciiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-180 0,-150 0,-150 30,-180 30,-180 0))"
 ]
}

 The dataset includes 270 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060673-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9gktbu
title: Occurrence Download

description: A dataset containing 265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Prunus hypoleuca)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 265 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060677-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14278/rodare.4029
title: Data publication: Non-van der Waals Heterostructures

description: This dataset includes the primary research data for the publication "Non-van der Waals Heterostructures".
DOI: 10.14278/rodare.3621
title: Data publication: Non-van der Waals Heterostructures

description: This dataset includes the primary research data for the publication "Non-van der Waals Heterostructures".
DOI: 10.15468/dl.cbjq8r
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Luehea candida",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060679-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8nkt7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coraciiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-150 0,-120 0,-120 30,-150 30,-150 0))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060678-250920141307145/datasets/export for details.
DOI: 10.15468/dl.a5sp3n
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Deutzia mollis"
 ]
}

 The dataset includes 29 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060680-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.