cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/vgpgvx
title: Cryptops (Trigonocryptops) didi sp. n. (Chilopoda: Scolopendromorpha: Cryptopidae): expanding the cryptopid biodiversity in a Brazilian hotspot of subterranean fauna

description: This dataset contains the digitized treatments in Plazi based on the original journal article Borges, Diva Maria, Bichuette, Maria Elina, Chagas-Jr, Amazonas (2024): Cryptops (Trigonocryptops) didi sp. n. (Chilopoda: Scolopendromorpha: Cryptopidae): expanding the cryptopid biodiversity in a Brazilian hotspot of subterranean fauna. Journal of Natural History 58 (33 - 36): 1303-1317, DOI: 10.1080/00222933.2024.2373469, URL: http://dx.doi.org/10.1080/00222933.2024.2373469ABSTRACTARTICLE HISTORY Received 17 August 2023 Accepted 21 June 2024A new troglobitic Cryptops species is described in Lage Branca Cave, Upper Ribeira karst, São Paulo state, Brazil. Cryptops (Trigonocryptops) didi sp. n. is closely related to Cryptops (T.) iporangensis Ázara and Ferreira, 2013 and Cryptops (T.) iheringi Brölemann, 1902. However, it differs from them in several aspects, including the number of saw teeth on the tibia and tarsus 1 of the ultimate legs, the sutures on the first antennal article, the sutures on the first trunk tergite, and the presence of trigonal sutures on the anterior sternites. Cryptops (Trigonocryptops) didi sp. n. is the second troglobitic species of Cryptops found in the caves of the Upper Ribeira karst area. This discovery enhances the diversity of troglobites in one of the richest cave systems in South America, the Areias Cave System. It also underscores the importance of ongoing faunistic inventories in one of the most extensively sampled areas for subterranean fauna in Brazil. We also transferred Cryptops (T.) iporangensis to the subgenus Cryptops Leach, 1814.KEYWORDSBrazilian caves; centipede; troglomorphic; Upper Ribeira karst areahttp://www.zoobank.org/ urn:lsid:zoobank.org:pub: 7BAB8A6B-047B-4752-BD5C-34AF0BAE4195
DOI: 10.5061/dryad.541pt
title: Data from: Differences between hard and soft phylogenetic data

description: When building the tree of life, variability of phylogenetic signal is
 often accounted for by partitioning gene sequences and testing for
 differences. The same considerations however are rarely applied to
 morphological data, potentially undermining its use in evolutionary
 contexts. Here we apply partition heterogeneity tests to 59 animal
 datasets to demonstrate that significant differences exist between the
 phylogenetic signal conveyed by ‘hard’ and ‘soft’ characters (bones, teeth
 and shells versus myology, integument etc). Furthermore, the morphological
 partitions differ significantly in their consistency relative to
 independent molecular trees. The observed morphological differences
 correspond with missing data biases, and as such their existence presents
 a problem not only for phylogeny reconstruction, but also for
 interpretations of fossil data. Evolutionary inferences drawn from clades
 in which hard, readily-fossilizable characters are relatively less
 consistent and different from other morphology (mammals, bivalves) may be
 less secure. More secure inferences might be drawn from the fossil record
 of clades that exhibit fewer differences, or exhibit more consistent hard
 characters (fishes, birds). In all cases it will be necessary to consider
 the impact of missing data on empirical data, and the differences that
 exist between morphological modules.
description: SI_matrices
 Edited
 morphological data matrices (TNT format) for each dataset with specific
 character codings, character partitions, and molecular trees
 TNT script for
 running IRD test
DOI: 10.57783/w1v8-kp72
title: LibreChat
DOI: 10.15468/dl.qp8z4n
title: Occurrence Download

description: A dataset containing 6748 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Platycodon"
 ]
}

 The dataset includes 6748 records from 258 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000697-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.q3t310k
title: Data from: Examining human-carnivore interactions using a socio-ecological framework: sympatric wild canids in India as a case study

description: Many carnivores inhabit human-dominated landscapes outside protected
 reserves. Spatially explicit assessments of carnivore distributions and
 livestock depredation patterns in human-use landscapes are crucial for
 minimising negative interactions and fostering coexistence between people
 and predators. India harbors 23% of the world’s carnivore species that
 share space with 1.3 billion people in ~2.3% of the global land area. We
 examined carnivore distributions and human-carnivore interactions in a
 multi-use forest landscape in central India. We focused on five sympatric
 carnivore species: Indian gray wolf Canis lupus pallipes, dhole Cuon
 alpinus, Indian jackal C. aureus indicus, Indian fox Vulpes bengalensis
 and striped hyena Hyaena hyaena. Carnivore occupancy ranged from 12% for
 dholes to 86% for jackals, mostly influenced by forests, open scrublands,
 and terrain ruggedness. Livestock/poultry depredation probability in the
 landscape ranged from 21% for dholes to &gt;95% for jackals,
 influenced by land cover and livestock- or poultry-holding. The five
 species also showed high spatial overlap with free-ranging dogs,
 suggesting potential competitive interactions and disease-risks, with
 consequences for human health and safety. Our study provides insights on
 factors that facilitate and impede co-occurrence between people and
 predators. Spatial prioritisation of carnivore-rich areas and
 conflict-prone locations could facilitate human-carnivore coexistence in
 shared habitats. Our framework is ideally suited for making
 socio-ecological assessments of human-carnivore interactions in other
 multi-use landscapes and regions, worldwide.
description: Data_Srivathsa_etal2018
DOI: 10.17182/hepdata.157847.v1/t1
title: "Signal $c_{\mathrm{tW}}^{\mathrm{I}}$ score distribution" of "Search for $CP$ violation in events with top quarks and Z bosons at $\sqrt{s}$ = 13 and 13.6 TeV"

description: Distribution of the discretized $c_{\mathrm{tW}}^{\mathrm{I}}$ score for events in the $c_{\mathrm{tW}}^{\mathrm{I}}$-like category in tZq events. The contributions from the SM, linear, and quadratic terms when $c_{\mathrm{tW}}^{\mathrm{I}}$ is set to unity are plotted separately.
description: No data abstract available.
DOI: 10.17182/hepdata.157847.v1/t4
title: "Observed $c_{\mathrm{tZ}}^{\mathrm{I}}$ score distribution" of "Search for $CP$ violation in events with top quarks and Z bosons at $\sqrt{s}$ = 13 and 13.6 TeV"

description: Distribution of the discretized $c_{\mathrm{tZ}}^{\mathrm{I}}$ score for events in the $c_{\mathrm{tZ}}^{\mathrm{I}}$-like category, compared with the predictions obtained when all fit parameters are set to their maximum likelihood value in the linear fit.
description: No data abstract available.
DOI: 10.17182/hepdata.157847.v1/t5
title: "Likelihood scan (linear fit)" of "Search for $CP$ violation in events with top quarks and Z bosons at $\sqrt{s}$ = 13 and 13.6 TeV"

description: Likelihood scans as functions of $c_{\mathrm{tW}}^{\mathrm{I}}$ and $c_{\mathrm{tZ}}^{\mathrm{I}}$, including linear contributions only.
description: No data abstract available.
DOI: 10.17182/hepdata.157847.v1/t2
title: "Signal $c_{\mathrm{tZ}}^{\mathrm{I}}$ score distribution" of "Search for $CP$ violation in events with top quarks and Z bosons at $\sqrt{s}$ = 13 and 13.6 TeV"

description: Distribution of the discretized $c_{\mathrm{tZ}}^{\mathrm{I}}$ score for events in the $c_{\mathrm{tZ}}^{\mathrm{I}}$-like category in $t\bar{t}Z$ events. The contributions from the SM, linear, and quadratic terms when $c_{\mathrm{tZ}}^{\mathrm{I}}$ is set to unity are plotted separately.
description: No data abstract available.
DOI: 10.17182/hepdata.157847.v1/t3
title: "Observed $c_{\mathrm{tW}}^{\mathrm{I}}$ score distribution" of "Search for $CP$ violation in events with top quarks and Z bosons at $\sqrt{s}$ = 13 and 13.6 TeV"

description: Distribution of the discretized $c_{\mathrm{tW}}^{\mathrm{I}}$ score for events in the $c_{\mathrm{tW}}^{\mathrm{I}}$-like category, compared with the predictions obtained when all fit parameters are set to their maximum likelihood value in the linear fit.
description: No data abstract available.
DOI: 10.17182/hepdata.157847.v1/t6
title: "Likelihood scan (quadratic fit)" of "Search for $CP$ violation in events with top quarks and Z bosons at $\sqrt{s}$ = 13 and 13.6 TeV"

description: Likelihood scans as functions of $c_{\mathrm{tW}}^{\mathrm{I}}$ and $c_{\mathrm{tZ}}^{\mathrm{I}}$, including both linear and quadratic contributions.
description: No data abstract available.
DOI: 10.5061/dryad.72602
title: Data from: Many places called home: the adaptive value of seasonal adjustments in range fidelity

description: 1. The vast majority of animal species display range fidelity, a space-use
 behaviour enhancing familiarity with local habitat features. While the
 fitness benefits of this behaviour have been demonstrated in a variety of
 taxa, some species or populations rather display infidelity, displacing
 their home range over time. Others, such as many ungulate species, show
 seasonal adjustments in their range fidelity to accommodate changes in the
 dominance of limiting factors or in the distribution of resources. 2. Few
 empirical studies have explored the adaptive value of seasonal adjustments
 in range fidelity. Using boreal populations of woodland caribou (Rangifer
 tarandus caribou) as a biological model, we evaluated how range fidelity
 impacted individual performance during two seasons where juvenile and
 adult survival are limited by different predation pressures. 3. Between
 2004 and 2013, we monitored the survival, reproductive success, habitat
 selection and range fidelity of female caribou in the boreal forest of
 eastern Canada. Using resource selection functions, we assessed how
 seasonal range fidelity was linked to two fitness correlates: calf
 survival in summer and adult female survival in winter. 4. Females
 displayed season-specific space use tactics: they selected previously used
 areas during calving and summer, but tended to shift their winter range
 from one year to the next. During calving and summer, range fidelity
 yielded relatively high fitness benefits, as females that did not lose
 their calf displayed stronger fidelity than females that did. In winter,
 however, adult survival was negatively linked to range fidelity, as
 females that survived selected areas further away from their seasonal
 range of the previous year than females that died. 5. We provide one of
 the first evidences that making seasonal adjustments in range fidelity can
 be an adaptive behaviour influencing the spatial distribution of a
 threatened species. Assessing the seasonal nature of range fidelity
 tactics may improve our predictions of space use and associated fitness
 implications for species displaying this behaviour.
description: summer_baseData used in the resource selection function analysis linking habitat selection to range fidelity and calf survival in calving and summer.winter_baseData used in the resource selection function analysis linking habitat selection to range fidelity and adult female survival during winter.
DOI: 10.5061/dryad.pf318
title: Data from: Mixed-source reintroductions lead to outbreeding depression in second-generation descendents of a native North American fish

description: Reintroductions are commonly employed to preserve intraspecific
 biodiversity in fragmented landscapes. However, reintroduced populations
 are frequently smaller and more geographically isolated than native
 populations. Mixing genetically divergent sources is often proposed to
 attenuate potentially low genetic diversity in reintroduced populations
 that may result from small effective population sizes. However, a possible
 negative tradeoff for mixing sources is outbreeding depression in hybrid
 offspring. We examined the consequences of mixed-source reintroductions on
 several fitness surrogates at nine slimy sculpin (Cottus cognatus)
 reintroduction sites in southeast Minnesota. We inferred the relative
 fitness of each crosstype in the reintroduced populations by comparing
 their growth rate, length, weight, body condition, and persistence in
 reintroduced populations. Pure strain descendents from a single source
 population persisted in a greater proportion than expected in the
 reintroduced populations, whereas all other crosstypes occurred in a
 lesser proportion. Length, weight, and growth rate were lower for
 second-generation intra-population hybrid descendents than for pure strain
 and first generation hybrids. In the predominant pure strain, young-of
 the-year size was significantly greater than any other crosstype. Our
 results suggested that differences in fitness surrogates among crosstypes
 were consistent with disrupted co-adapted gene complexes associated with
 beneficial adaptations in these reintroduced populations. Future
 reintroductions may be improved by evaluating the potential for local
 adaptation in source populations or by avoiding the use of mixed sources
 by default when information on local adaptations or other genetic
 characteristics is lacking.
description: Dryad_data_ddhMicrosatellite alleles, weight, and length for slimy sculpins collected and used in this study.
DOI: 10.5061/dryad.c4k2n06
title: Data from: Functional group, biomass, and climate change effects on ecological drought in semiarid grasslands

description: Water relations in plant communities are influenced both by contrasting
 functional groups (grasses, shrubs) and by climate change via complex
 effects on interception, uptake and transpiration. We modelled the effects
 of functional group replacement and biomass increase, both of which can be
 outcomes of invasion and vegetation management, and climate change on
 ecological drought (soil water potential below which photosynthesis stops)
 in 340 semiarid grassland sites over 30-year periods. Relative to control
 vegetation (climate and site-determined mixes of functional groups), the
 frequency and duration of drought were increased by shrubs and decreased
 by annual grasses. The rankings of shrubs, control vegetation, and annual
 grasses in terms of drought effects were generally consistent in current
 and future climates, suggesting that current differences among functional
 groups on drought effects predict future differences. Climate change
 accompanied by experimentally-increased biomass (i.e. the effects of
 invasions that increase community biomass, or management that increases
 productivity through fertilization or respite from grazing) increased
 drought frequency and duration, and advanced drought onset. Our results
 suggest that the replacement of perennial temperate semiarid grasslands by
 shrubs, or increased biomass, can increase ecological drought both in
 current and future climates.
description: Wilson2018Data
DOI: 10.5061/dryad.c17p8
title: Data from: Iterative ontogenetic development of ammonoid conch shapes from the Devonian through to the Jurassic

description: We measured longitudinal growth in conch cross-sections of 177 Devonian to
 Jurassic ammonoid species to test whether conch ontogenetic development
 parallels the iterative evolution of pachyconic or globular conch shapes.
 Ontogenetic trajectories of two cardinal conch parameters, conch width
 index and umbilical width index, show a few common recurring ontogenetic
 pathways in terms of the number of ontogenetic phases. The most common,
 with three phases in the conch width index (decrease–increase–decrease)
 and umbilical width index (increase–decrease–increase), is termed here
 C-mode ontogeny (after the Carboniferous genus Cravenoceras). Many of the
 studied globular Palaeozoic and Triassic species (of the latter,
 particularly the arcestid ammonoids) share principal patterns in the
 triphasic C-mode conch ontogeny in closely related groups but also between
 unrelated groups as well. The repetition of conch growth patterns is an
 example of convergent evolution of the entire life history of globular
 ammonoids. The studied Jurassic globular shaped ammonoids deviate from the
 growth patterns seen in earlier groups showing less pronounced ontogenetic
 trajectories with nearly isometric or weakly asymmetric growth without
 distinct phases. This trajectory is termed here M-mode ontogeny (after the
 Jurassic genus Macrocephalites). No major change in the ontogenetic modes
 of pachyconic and globular ammonoids occurred moving from the Palaeozoic
 into the Mesozoic; the survivors of the end-Permian extinction event
 iteratively developed conch ontogenies similar to those of Palaeozoic
 forms. In contrast, the Triassic–Jurassic boundary marks the major event
 with the evolution of some cardinal conch parameters relating to globular
 ammonoid ontogeny.
description: Ontogenetic_Conch_Parameter_DataAmmonoid species list with taxonomic affiliations, geological stage information and source of the ontogenetic data. Ontogenetic series of conch parameters, conch width index (CWI), umbilical width index (UWI) and whorl expansion rate (WER) from studied ammonoid cross sections.
DOI: 10.5061/dryad.2m614
title: Data from: Cardiac dysfunction in Duchenne muscular dystrophy is less frequent in patients with mutations in the dystrophin Dp116 coding region than in other regions

description: Background: Duchenne muscular dystrophy (DMD), the most common inherited
 muscular disease in childhood, is caused by dystrophin deficiency because
 of mutations in the DMD gene. Although DMD is characterized by fatal
 progressive muscle wasting, cardiomyopathy is the most important nonmuscle
 symptom threatening the life of patients with DMD. The relationship
 between cardiac involvement and dystrophin isoforms has not been analyzed.
 Methods and Results: The results of 1109 echocardiograms obtained from 181
 Japanese DMD patients with confirmed mutations in the DMD gene were
 retrospectively analyzed. Patients showed an age-related decline in left
 ventricular ejection fraction. Patients were divided by patterns of
 dystrophin isoform deficiency into 5 groups. The cardiac dysfunction-free
 survival was significantly higher in the group with mutations in the Dp116
 coding region than the others, whereas no significant differences in the
 other 3 groups. At age 25 years, the cardiac dysfunction-free rate was 0.6
 in the Dp116 group, but only 0.1 in others. PCR amplification of Dp116
 transcript in human cardiac muscle indicated promoter activation.
 Conclusions: Left ventricular ejection fraction in DMD declined stepwise
 with age. Cardiac dysfunction was less frequent in Dp116-deficient than
 other patients with DMD. Dp116 transcript was identified in human cardiac
 muscle for the first time. These results indicate that Dp116 is associated
 with cardiac involvement in DMD.
description: Echocardiographic
 examinations of Duchenne muscular dystrophyFollow-up data of
 echocardiographic examinations of Japanese Duchenne muscular dystrophy
 patientsYamamoto CIRCVG
 database.xlsx
DOI: 10.17182/hepdata.132661.v1/t1
title: "Table 1" of "Beam Energy Dependence of Fifth and Sixth-Order Net-proton Number Fluctuations in Au+Au Collisions at RHIC"

description: Event-by-event proton multiplicity distributions for 0-40$\%$, 0-5$\%$ and 50-60$\%$ Au+Au collisions at $\sqrt{s_{NN}} = 3 GeV. The distributions are not corrected for proton and antiproton detection efficiency.
description: No data abstract available.
DOI: 10.17182/hepdata.132661.v1/t2
title: "Table 2" of "Beam Energy Dependence of Fifth and Sixth-Order Net-proton Number Fluctuations in Au+Au Collisions at RHIC"

description: Proton factorial cumulants K4, K5 and K6 in 0-40$\%$ and 50-60$\%$ Au+Au collisions from $\sqrt{s_{NN}}$ = 3 - 200 GeV. At $\sqrt{s_{NN}}$ = 3 GeV, measurement is done with halfrapdity coverage (-0.5 $&lt;$ y $&lt;$ 0) while for rest of energies the rapidity coverage is (-0.5 $&lt;$ y $&lt;$ -0.5).
description: No data abstract available.
DOI: 10.17182/hepdata.132661.v1/t3
title: "Table 3" of "Beam Energy Dependence of Fifth and Sixth-Order Net-proton Number Fluctuations in Au+Au Collisions at RHIC"

description: Proton factorial cumulants K4, K5 and K6 from UrQMD model (0-40$\%$ and 50-60$\%$ centrality) for Au+Au collisions from $\sqrt{s_{NN}}$ = 3 - 200 GeV. UrQMD calculation for 3 GeVis with rapidity coverage (-0.5 $&lt;$ y $&lt;$ 0) while for rest of energies the rapidity coverage is (-0.5 $&lt;$ y $&lt;$ -0.5). In addition, two-component model (0-40$\%$) calculations for facorial cumulants are also given.
description: No data abstract available.
DOI: 10.17182/hepdata.132661.v1/t4
title: "Table 4" of "Beam Energy Dependence of Fifth and Sixth-Order Net-proton Number Fluctuations in Au+Au Collisions at RHIC"

description: Net-proton cumulant ratios C4/C2, C5/C1, C6/C2 (0-40$\%$ and 50-60$\%$ centrality) and C3/C1 (0-40$\%$ centrality) in Au+Au collisions from $\sqrt{s_{NN}}$ = 3 - 200 GeV. At $\sqrt{s_{NN}}$ = 3 GeV, measurement is done for protons instead of net-protons, and with halfrapdity coverage (-0.5 $&lt;$ y $&lt;$ 0) while for rest of energies the rapidity coverage is (-0.5 $&lt;$ y $&lt;$ -0.5).
description: No data abstract available.
DOI: 10.17182/hepdata.132661.v1/t5
title: "Table 5" of "Beam Energy Dependence of Fifth and Sixth-Order Net-proton Number Fluctuations in Au+Au Collisions at RHIC"

description: Net-proton cumulant ratios C4/C2, C5/C1, C6/C2 (0-40$\%$ and 50-60$\%$ centrality) and C3/C1 (0-40$\%$ centrality) from UrQMD model in Au+Au collisions from $\sqrt{s_{NN}}$ = 3 -200 GeV. At $\sqrt{s_{NN}}$ = 3 GeV, UrQMD calculation is done for protons instead of net-protons, and with halfrapdity coverage (-0.5 $&lt;$ y $&lt;$ 0) while for rest of energies the rapidity coverage is (-0.5 $&lt;$ y $&lt;$ -0.5).
description: No data abstract available.
DOI: 10.17182/hepdata.132661.v1/t6
title: "Table 6" of "Beam Energy Dependence of Fifth and Sixth-Order Net-proton Number Fluctuations in Au+Au Collisions at RHIC"

description: Fifth-to-first (KS5/KS1) and sixth-to-second (KS6/KS2) order K-statistic ratios of net-proton distributions in Au+Au collisions at $\sqrt{s_{NN}}$ = 7.7 GeV for 0-40$\%$ and 50-60$\%$ centrality.
description: No data abstract available.
DOI: 10.17182/hepdata.132661.v1/t7
title: "Table 7" of "Beam Energy Dependence of Fifth and Sixth-Order Net-proton Number Fluctuations in Au+Au Collisions at RHIC"

description: Net-proton cumulant ratio C6/C2 and corresponding K-statistic ratio (0-40$\%$) in Au+Au collisions at $\sqrt{s_{NN}}$ = 7.7 GeV as a function of sample size. Uncertainties are only statistical.
description: No data abstract available.
DOI: 10.17182/hepdata.132661.v1/t8
title: "Table 8" of "Beam Energy Dependence of Fifth and Sixth-Order Net-proton Number Fluctuations in Au+Au Collisions at RHIC"

description: Cumulant ratios C4/C2, C5/C1 and C6/C2 of net-proton distributions measured with half rapdity coverage (-0.5 $&lt;$ y $&lt;$ 0) in 0-40$\%$ central Au+Au collisions for collider energies from $\sqrt{s_{NN}}$ = 7.7 - 54.4 GeV.
description: No data abstract available.