cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10798036
title: Outgroup Phyla CANTATA Transcriptomes

description: CANTATA is a Community bAsed Non-bilaTeriAn Transcriptome Archive aiming to provide an archive of non-bilaterian transcriptomic resources assembled and annotated in a standardized manner.

 

In this repository, we provide the transcriptomes assemblies corresponding to different animal outgroup Phyla.

 

Currently the following species are available:



Abeoforma whisleri

Acanthoeca spectabilis

Amoebidium parasiticum

Capsaspora owczarzaki

Helgoeca nana

Salpingoeca infusionum


The details about the read files used to assemble each transcriptome can be found at the CANTATA repository (https://gitlab.lrz.de/palmuc/cantata)
DOI: 10.15468/dl.otfci1
title: Occurrence Download

description: A dataset listing the 2815321 species recorded in GBIF matching the query:
{ }

 The dataset's 2815321 records were derived from 25196 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008040-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18041370
title: Dataset of agricultural labor force characteristics and mechanization adoption

description: This dataset was generated and processed by the Yantai Agricultural Science Research Institute, Shandong, China, through a peasant household survey workflow. The process began with the design of a structured questionnaire based on the research objectives, covering modules such as household demographics, labor force structure, farmland management, agricultural mechanization adoption, and household economics. A multi-stage stratified random sampling method was employed to select representative counties, townships, and villages within high-standard farmland project areas of Shandong Province, culminating in the random selection of farm households for the final sample. Face-to-face interviews during the 2024-2025 period. The final cleaned and anonymized dataset was exported into a non-proprietary format (.xlsx) . This final package constitutes the version deposited in the public repository. The entire process adhered to the institute's internal research ethics guidelines, ensuring data sharing complies with ethical standards while maintaining utility for reuse.
DOI: 10.5281/zenodo.17160020
title: Drivers of TCs in the SWIO based on 5 CMIP6 Models
title: Historical and SSP585  zonal & meridional wind components

description: This dataset provides monthly mean zonal (ua) and meridional (va) wind components on standard atmospheric pressure levels from CMIP6 global climate models. It covers both the historical period (1959–2000) and the high-emission SSP585 scenario (2060–2100).

The data are extracted for the Southwest Indian Ocean (SWIO) domain to enable detailed investigations of tropical cyclone (TC) environmental conditions, including:





Vertical wind shear (computed from ua and va differences between upper- and lower-troposphere)




Steering flow patterns relevant for TC tracks and propagation




Large-scale circulation changes under a warming climate



The included CMIP6 models are:





ACCESS-CM2




CIESM




CMCC-ESM2




INM-CM5-0




MPI-ESM1-2-LR



Files are distributed in NetCDF format and follow the CMIP6 “Amon” frequency (Atmosphere, monthly). Each file corresponds to one model experiment on its native grid (gn, gr, or gr1).
DOI: 10.5281/zenodo.17160021
title: Drivers of TCs in the SWIO based on 5 CMIP6 Models
title: Historical and SSP585  zonal & meridional wind components

description: This dataset provides monthly mean zonal (ua) and meridional (va) wind components on standard atmospheric pressure levels from CMIP6 global climate models. It covers both the historical period (1959–2000) and the high-emission SSP585 scenario (2060–2100).

The data are extracted for the Southwest Indian Ocean (SWIO) domain to enable detailed investigations of tropical cyclone (TC) environmental conditions, including:





Vertical wind shear (computed from ua and va differences between upper- and lower-troposphere)




Steering flow patterns relevant for TC tracks and propagation




Large-scale circulation changes under a warming climate



The included CMIP6 models are:





ACCESS-CM2




CIESM




CMCC-ESM2




INM-CM5-0




MPI-ESM1-2-LR



Files are distributed in NetCDF format and follow the CMIP6 “Amon” frequency (Atmosphere, monthly). Each file corresponds to one model experiment on its native grid (gn, gr, or gr1).
DOI: 10.18419/darus-3895
title: Ship-based GNSS Tsunami Detection Pilot Network

description: &lt;p&gt;The dataset contains the real-time GNSS position solutions from ships in the
Ship-based GNSS Tsunami Detection Pilot Network. Each file contains the full
rate ascii position data for one calendar year per ship with one line per 
record and the following columns:&lt;/p&gt;
&lt;pre&gt;
YYYY MM DD HH MN SS LAT LON ELEV SIGMAY SIGMAX SIGMAZ
&lt;/pre&gt;
&lt;p&gt;
Date and time are in UTC. LAT LON are in degrees, with ELEV being the antenna
reference point height in meters above the WGS84 ellipsoid. SIGMAX|Y|Z are the
formal errors returned by the RTX Positioning service onboard each ship's GNSS 
receiver (Units are meters). &lt;/p&gt;
&lt;p&gt;
Files are named by ship and year. (Note that the Maersk Aotea started the project
named Maersk Svend, and its name was changed during the project. We have gathered all the data under its Aotea name.&lt;/p&gt;
&lt;ul&gt;
&lt;li&gt;The R/Vs Kamimikai and Kilo Moana are research vessels from the University of Hawaii&lt;/li&gt;
&lt;li&gt;The R/V Ron Brown is a NOAA research vessel. &lt;/li&gt;
&lt;li&gt;M/V Mahimahi and Manoa are Matson Inc container ships.&lt;/li&gt;
&lt;li&gt;Maersk ships are all the same model of container ship.&lt;/li&gt;
 &lt;/ul&gt;
&lt;p&gt;
DOI: 10.18419/darus-3669
title: Replication data of Kästner group for: "Ruthenium-Catalyzed Secondary Amine Formation Studied by Density Functional Theory"

description: In this dataset, all simulation data are listed. That includes all geometry optimized structures as xyz-files and all input-files for the calculations as chm-files. The files are named according to the nomenclature in the publication. Furthermore, the dataset includes a &lt;a href="https://darus.uni-stuttgart.de/file.xhtml?fileId=251062"&gt;README&lt;/a&gt; file with a more detailed description on content of the dataset.
DOI: 10.18419/darus-1508
title: Publication data for: "3D Sub-Nanometer Analysis of Glucose in an Aqueous Solution by Cryo-Atom Probe Tomography"

description: All primary data files and processed data of the journal article. DFT calculations to the fragmentation of glucose cations to explain the peaks in the APT mass spectrum. Glucose with attached water molecules and glucose with fractions removed. Each directory contains the input and output data of one turbomole DFT calculation.
DOI: 10.18419/darus-3440
title: Replication Data for: Holes in glulam - Orientation and design of internal reinforcements

description: This repository contains the finite element models for Abaqus used to generate the results shown in the paper. The models are written in Python and were tested with Abaqus v2016. Three models are provided:
&lt;ol&gt;
&lt;li&gt;Model of a glulam beam with a circular hole without reinforcement&lt;/li&gt;
&lt;li&gt;Model of a glulam beam with a circular hole with internal reinforcements (internal reinforcements can be defined with a varying angle)&lt;/li&gt;
&lt;li&gt;Model of a glulam beam with a circular hole with internal reinforcements and a discrete crack at the position of maximum tensile stresses perpendicular to the grain (internal reinforcements can be defined with a varying angle)&lt;/li&gt;
&lt;/ol&gt;
DOI: 10.18419/darus-3611
title: Experiment Videos of a Force-Based Organization and Control Scheme for the Non-Prehensile Cooperative Transportation of Objects

description: &lt;p&gt;The videos provided show experimental results of the cooperative object transportation using mobile robots with on-board force control. In particular, the mobile robots shall transport four different polygonal, but non-convex, objects along predefined paths. The distributed formation synthesis explicitly takes the robots' maximum pushing force into account such that a closed-set manipulation space in terms of a zonotope follows. This zonotopic manipulation space, following from the Minkoswki sum of the individual manipulation capabilities of the robots, is visualized in the fifth video (Visualization_Fig4a.mp4) using data from the corresponding hardware experiment (Rectangle_N4_square.mp4).&lt;/p&gt;
Novelly, a lightweight quadratic program runs on each robot and determines in a decentralized manner the desirable individual pushing forces suitable to transport the object. These pushing forces are then governed by means of hybrid position-force controllers running at 100 Hz. As for formation finding, no central entity is used for control purposes. The tasks are accomplished in a purely distributed manner using inter-robot communication. For each robot, the pushing force is measured using a self-designed force-sensing unit mounted on board of each mobile robot. In the videos, the direction of the uniaxial and unilateral force sensor is indicated by white rectangles. Moreover, the measured force is visualized by red rectangles superimposed onto the white ones.
DOI: 10.15468/dl.qp33cw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Medicago monantha",
 "Country is Latvia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011475-250920141307145/datasets/export for details.
DOI: 10.18419/darus-3653
title: Dataset: Single Heat Pump Simulation - Prepared "Learn Params", 100 Data Points

description: &lt;p&gt;This data set serves as training data for modelling the temperature field emanating from a groundwater heat pump. It is simulated with Pflotran, preprocessed with python and saved in pt-format. It contains 100 data points, each consisting of one simulation run after 5 years - so not necessarily in steady state. Each datapoint measures 100 m x 1280 m with 20 x 256 cells. The varying parameters of the data set are pressure and permeability. Both are constant within a data point, but vary across the data set. Other parameters that define the data set, such as porosity, are chosen to be as close as possible to reality. Generated with scripts from &lt;a href="https://github.com/JuliaPelzer/Dataset-generation-with-Pflotran"&gt;Dataset generation with Pflotran&lt;/a&gt; (commit 94daf52) with arguments given in inputs/args.yaml.&lt;/p&gt;

&lt;p&gt;The prepared dataset contains two input options: full fields in Inputs folder or reduced input of 4 parameters per datapoint in InputParams; and two label options: full fields in Labels and 4 parameters in LearnableParams.&lt;/p&gt;

More information about the specific parameters are in the readme file.
DOI: 10.15468/dl.qr5u22
title: Occurrence Download

description: A dataset containing 330 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Checklist of vascular plants of the projected regional landscape park «Valley of kurgans» (Kherson region, Ukraine)"
 ]
}

 The dataset includes 330 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011476-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13626240
title: Anticoagulant and anti-inflammatory effects of fondaparinux sodium in anterior cruciate ligament reconstruction in patients at high risk of VTE: A Randomized Controlled Trial
DOI: 10.5281/zenodo.17190817
title: Anticoagulant and anti-inflammatory effects of fondaparinux sodium in anterior cruciate ligament reconstruction in patients at high risk of VTE: A Randomized Controlled Trial
DOI: 10.18419/darus-3789
title: Crash Simulations of a Racing Kart's Structural Frame Colliding against a Rigid Wall

description: &lt;b&gt;Crash Simulations of a Racing Kart Frame Model&lt;/b&gt; &lt;br&gt;&lt;br&gt;
This dataset contains results for several crash simulations of the frame of a racing kart colliding against a rigid wall. 
&lt;br&gt;&lt;br&gt;
The wall and the frame itself are modeled as finite element models, implemented in the commercial software tool LS-Dyna. The latter comprises 9314 nodes, each possessing 3 translational degrees of freedom. The simulated scenario involves the kart colliding against a rigid wall, with the impact speed varying between 5 and 30 m/s, the impact angle between -45 and 45 degrees and the yield stress between 168 and 758 MPa.
&lt;br&gt;&lt;br&gt;
The impact angle is the angle between the wall normal and the orientation of the kart, while the yield stress influences the effective plastic stress-strain curve of the kart material. This curve matches that of typical steel, but is adjusted based on the unique yield stress of each simulation.&lt;br&gt;
Each crash simulation covers a time span of 0.003 seconds with a sampling interval of 0.3 milliseconds, resulting in 101 samples per simulation. A total of 128 parameter combinations were generated with Halton sequences.
&lt;br&gt;&lt;br&gt;
Moreover, the source code of the finite element model itself, written for the commercial simulation software LS-DYNA, is included as well. &lt;br&gt;&lt;br&gt;

&lt;b&gt;Content&lt;/b&gt; &lt;br&gt;
&lt;ol&gt;
&lt;li&gt;Model&lt;br&gt;
 * input files for the FE simulation software LS-DYNA containing the model description&lt;br&gt;&lt;/li&gt;
&lt;li&gt;Kart Dataset&lt;br&gt;
 * simulation results containing the node displacements and simulation parameters. The units are [N,m,s].&lt;br&gt;&lt;/li&gt;
&lt;/ol&gt;
DOI: 10.18419/darus-1827
title: Data for "Ordered Mesoporous Carbons via Self-Assembly of Tailored Block Copolyethers for Pore Size-Dependent Applications"

description: &lt;p&gt;Data for "Ordered Mesoporous Carbons via Self-Assembly of Tailored Block Copolyethers for Pore Size-Dependent Applications" is reported.&lt;/p&gt;
 
&lt;p&gt;The data is structured according to polymer sample identifiers in the research article and contains the following data types: NMR raw data, GPC (SEC) raw data, gas sorption (N2) data, SAXS raw data.&lt;/p&gt;

&lt;p&gt;The data is further structured in a way that for each polymer sample, the NMR and GPC analysis is given. The carbon materials resulting from the applications of these polymers are then further characterized by gas sorption and SAXS.&lt;/p&gt;

NMR data can be used to calculate average block lengths and the hydrophilic-to-lipophilic balance. GPC data contain information about relative molar masses and molar mass distribution. Gas sorption reveals information about, e.g., pore sizes and their distribution as well as specific surface area. SAXS data can be studied for symmetry of pore arrangement.
DOI: 10.15468/dl.7aqhvs
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Medicago monantha",
 "Country is Qatar",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011478-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3j8cgb
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Medicago monantha",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011477-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3331
title: Experiment Videos of the Force-Based Non-Prehensile Cooperative Transportation of Objects with Mobile Robots

description: The videos provided show two experimental results of cooperative object transportation using lightweight omnidirectional mobile robots. In particular, the mobile robots shall transport two different polygonal, but non-convex, objects along predefined paths. No central decision entity is employed; the tasks are accomplished in a purely distributed manner using inter-robot communication. Novelly, the formation synthesis relies on a force-based consideration that explicitly takes into account the physical limitations of the robotic agents. Due to this, if necessary, multiple robots are placed along one edge in order to exert the desired force acting on the object. This is exemplarily shown in the video and demonstrates one crucial advantage compared to purely position-based approaches. Furthermore, an underlying hybrid position-force controller is utilized to govern the individual pushing forces of the robots. The interacting force is measured by each agent using a self-designed onboard force-sensing unit. In the videos, the direction of the unilateral force sensor is indicated by white rectangles. Moreover, the measured force is visualized by the red rectangles superimposed onto the white ones.
DOI: 10.18419/darus-3303
title: Ikarus v0.3

description: Ikarus is a C++-based library (&lt;a href="https://ikarus-project.github.io/v0.3/"&gt;link to documentation&lt;/a&gt;) built to solve partial differential equations with the finite element method. 
&lt;br /&gt;&lt;br /&gt;
This release contains implementation of some fundamental concepts of finite element technology, addition of several workflows for efficient checks on github and improved documentation. For more details on the changes of this release refer the repo file CHANGELOG.md. or go to &lt;a href="https://github.com/ikarus-project/ikarus/blob/main/CHANGELOG.md#release-v03-prometheus"&gt;github&lt;/a&gt;.
&lt;br /&gt;&lt;br /&gt;
The dataset under this DOI contains the current release (v0.3) of the Ikarus library. This version's documentation (as *.zip and *.tar.gz) is also included, and it can be accessed by navigating to the top-level file "index.html" in a browser.
&lt;br /&gt;&lt;br /&gt;
Additionally, this dataset comes with two Docker containers. One has Ikarus for this release installed that can be used to execute examples. The other Docker container comes with pieces of the Ikarus library that can be built and developed further. 
&lt;br /&gt;&lt;br /&gt;
The Ikarus sources are also included as files formatted similarly to the documentation (i.e., as *.zip and *.tar.gz).
description: Use persistent identifiers from Software Heritage to cite individual files or even lines of the source code.
DOI: 10.18419/darus-3302
title: Continuum-mechanical Forward Simulation Results of a Human Upper-limb Model Under Varying Muscle Activations

description: This dataset provides simulation results from a high-fidelity human upper-arm finite element model under varying muscle activations and an example script to load the data.&lt;br&gt;
The upper arm model consists of the bones of the radius and ulna for the forearm and the humerus for the upper arm. The elbow joint that connects them is modeled as a simple hinge joint. It contains five muscles that operate this joint, two extensors and three flexors: 
&lt;ul&gt;
 &lt;li&gt;m. triceps brachii&lt;/li&gt;
 &lt;li&gt;m. anconeus&lt;/li&gt;
 &lt;li&gt;m. biceps brachii&lt;/li&gt;
 &lt;li&gt;m. brachialis&lt;/li&gt;
 &lt;li&gt;m. brachioradialis&lt;/li&gt;
&lt;/ul&gt;
The geometry of all these components is modeled after the Visible Human Male dataset. Each of the muscles is associated with a corresponding muscle activation, which represents the percentage of the maximum possible active stress that the muscle is currently exerting.&lt;br&gt;
The provided simulation results themselves contain data on element- and node-level including positional data as well as stress data and node-connectivity information. The saved simulation results constitutes equilibrium states for the given activation levels.
DOI: 10.18419/darus-4734
title: Replication Data for: Origin of Stereoselectivity in Ring Opening Metathesis Polymerization with Cationic Molybdenum Imido Alkylidene CAAC Complexes

description: In this dataset, all simulation data are listed. That includes all geometry optimizations and preceding CREST calculations for the first monomer along the mechanism described in the referenced paper. The calculations for each system can be found in the directory named after the monomer and the subdirectory named after the catalyst. All structures are named "*.xyz" and the input-files are named "*.chm" and the output-files are named "out". The third directory contains the python script used to calculate the fit function from the steric data extracted from the optimized geometries and the Excel table containing the statistical data of the fit.
DOI: 10.18419/darus-3668
title: Replication data of Kästner group for: "How Solid Surfaces Control Stability and Interactions of Supported Cationic Cu^I(dppf) Complexes - A Solid-State NMR Study"

description: In this dataset, all simulation data are listed. That includes all geometry optimizations and single-point calculations and solid-state NMR calculations. The folders with the data are named similar to the nomenclature in the publication. All structures are named "*.xyz" and the input-files are named "*.chm" and the output-files are named "out".
DOI: 10.15468/dl.ppvafh
title: Occurrence Download

description: A dataset containing 2359 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus saxatilis"
 ]
}

 The dataset includes 2359 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011466-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3366
title: Microstructure feature engineering data

description: &lt;p&gt;The dataset contains image data of periodic microstructural representative volume elements (RVE), as well as the effective heat conductivity for multiple phase contrasts.&lt;br&gt;
Various features and feature descriptors (explained in the related publication) are provided, as well as the computation thereof. The features were used in a machine learning regression setting (see related publication).&lt;br&gt;
The data is split into two sets, one with 30.000 samples containing only one inclusion type per RVE and another set of 1.500 samples containing mixed inclusions.&lt;/p&gt;

The repository comes with a data loader suited for flexible indexing.
DOI: 10.18419/darus-3550
title: Experimental Data and Models for "Knowledge-Based Modeling of Simulation Behavior for Bayesian Optimization"

description: &lt;p&gt;These files contain the data for the OpenDiHu experiments in sections 5.1.3 and 5.2.&lt;br&gt;
The settings used for the OpenDiHu simulations are in the &lt;code&gt;opendihu/&lt;/code&gt; folder.&lt;br&gt;
The simulation data is in the &lt;code&gt;data/&lt;/code&gt; folder and the used stan models are in the &lt;code&gt;models/&lt;/code&gt; folder.&lt;/p&gt;

For more details see &lt;a href="https://darus.uni-stuttgart.de/file.xhtml?fileId=239645"&gt;&lt;code&gt;README.md&lt;/code&gt;&lt;/a&gt;.
DOI: 10.18419/darus-1169
title: Replication Data for: "Olefin Metathesis in Confined Geometries: A Biomimetic Approach toward Selective Macrocyclization"

description: &lt;p&gt;This paper addresses the synthesis of macrocyclic molecules by a spatial confinement effect in SBA-15. Various aspects such as concentration dependence, substrate size and temperature dependence have been discussed. &lt;/p&gt;

Article PDF, submitted and accepted version, Figures and ChemDraw files with structures as published. OPEN ACCESS Article- Request access to files if needed.