cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc21c7pc
title: CCDC 1887642: Experimental Crystal Structure Determination

description: Related Article: Vasudha Thakur, Jisha Mary Thomas, Mohammad Adnan, Chinnappan Sivasankar, G. Vijaya Prakash, Natesan Thirupathi|2024|RSC Advances|14|13291|doi:10.1039/D4RA00828F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21c7qd
title: CCDC 1887643: Experimental Crystal Structure Determination

description: Related Article: Vasudha Thakur, Jisha Mary Thomas, Mohammad Adnan, Chinnappan Sivasankar, G. Vijaya Prakash, Natesan Thirupathi|2024|RSC Advances|14|13291|doi:10.1039/D4RA00828F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21c7rf
title: CCDC 1887644: Experimental Crystal Structure Determination

description: Related Article: Vasudha Thakur, Jisha Mary Thomas, Mohammad Adnan, Chinnappan Sivasankar, G. Vijaya Prakash, Natesan Thirupathi|2024|RSC Advances|14|13291|doi:10.1039/D4RA00828F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21c7sg
title: CCDC 1887645: Experimental Crystal Structure Determination

description: Related Article: Vasudha Thakur, Jisha Mary Thomas, Mohammad Adnan, Chinnappan Sivasankar, G. Vijaya Prakash, Natesan Thirupathi|2024|RSC Advances|14|13291|doi:10.1039/D4RA00828F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25549/pcra-ouc11140004
title: The Word of Truth, 2009, vol. 20, no. 12 = Cuvantul Adevarului, 2009, anul XX, nr 12

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.5517/ccdc.csd.cc21c7th
title: CCDC 1887646: Experimental Crystal Structure Determination

description: Related Article: Vasudha Thakur, Jisha Mary Thomas, Mohammad Adnan, Chinnappan Sivasankar, G. Vijaya Prakash, Natesan Thirupathi|2024|RSC Advances|14|13291|doi:10.1039/D4RA00828F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21c7wk
title: CCDC 1887648: Experimental Crystal Structure Determination

description: Related Article: Vasudha Thakur, Jisha Mary Thomas, Mohammad Adnan, Chinnappan Sivasankar, G. Vijaya Prakash, Natesan Thirupathi|2024|RSC Advances|14|13291|doi:10.1039/D4RA00828F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21c7xl
title: CCDC 1887649: Experimental Crystal Structure Determination

description: Related Article: Vasudha Thakur, Jisha Mary Thomas, Mohammad Adnan, Chinnappan Sivasankar, G. Vijaya Prakash, Natesan Thirupathi|2024|RSC Advances|14|13291|doi:10.1039/D4RA00828F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25549/pcra-c14-229137
title: The Word of Truth, 2009, vol. 20, no. 12 = Cuvantul Adevarului, 2009, anul XX, nr 12

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.25549/pcra-c14-229112
title: The Word of Truth, 2009, vol. 20, no. 11 = Cuvantul Adevarului, 2009, anul XX, nr 11

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.25549/pcra-c14-229106
title: The Word of Truth, 2009, vol. 20, no. 11 = Cuvantul Adevarului, 2009, anul XX, nr 11

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.25549/pcra-c14-229111
title: The Word of Truth, 2009, vol. 20, no. 11 = Cuvantul Adevarului, 2009, anul XX, nr 11

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.25549/pcra-c14-229258
title: The Word of Truth, 2011, vol. 22, no. 2 = Cuvantul Adevarului, 2011, anul XXII, nr 2

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.25549/pcra-c14-230109
title: The Word of Truth, 2010, vol. 21, no. 1 = Cuvantul Adevarului, 2010, anul XXI, nr 1

description: [description english/roman)] The Word of Truth is the periodical, official publication of the Romanian Pentecostal Church beginning from 1990 to present.
DOI: 10.25549/pcra-c14-230607
title: Authentic prophets and false prophets = Prorocii veritabili şi prorocii falşi

description: [description english/roman)] Eugen Bodor (1902-1983), during the period between the wars and after WWII has been one of the two Pentecostal ministers with theological studies. He was marginalized by the Communist regime. For writing candestinely a "Bible study about the spiritual gifts" in 1961 he was sentenced to 5 years in prison and confiscation of personal belongings. "Authentic Prophets and False Prophets", dated 1981, is a prophetology handbook drafted by Eugen Bodor.
DOI: 10.25549/pcra-c14-230600
title: Authentic prophets and false prophets = Prorocii veritabili şi prorocii falşi

description: [description english/roman)] Eugen Bodor (1902-1983), during the period between the wars and after WWII has been one of the two Pentecostal ministers with theological studies. He was marginalized by the Communist regime. For writing candestinely a "Bible study about the spiritual gifts" in 1961 he was sentenced to 5 years in prison and confiscation of personal belongings. "Authentic Prophets and False Prophets", dated 1981, is a prophetology handbook drafted by Eugen Bodor.
DOI: 10.25549/pcra-c14-230593
title: Authentic prophets and false prophets = Prorocii veritabili şi prorocii falşi

description: [description english/roman)] Eugen Bodor (1902-1983), during the period between the wars and after WWII has been one of the two Pentecostal ministers with theological studies. He was marginalized by the Communist regime. For writing candestinely a "Bible study about the spiritual gifts" in 1961 he was sentenced to 5 years in prison and confiscation of personal belongings. "Authentic Prophets and False Prophets", dated 1981, is a prophetology handbook drafted by Eugen Bodor.
DOI: 10.25549/pcra-ouc11141878
title: The By-laws of the Pentecostal Apostolic Church of God in Romania, 1947 = Statutul Bisericii lui Dumnezeu Apostolice-Penticostale din Romania din anul 1947

description: [description english/roman)] The By-laws of the Pentecostal Apostolic Church of God in Romania 1947.
DOI: 10.15468/dl.ahb27t
title: Occurrence Download

description: A dataset listing the 3820421 species recorded in GBIF matching the query:
{ }

 The dataset's 3820421 records were derived from 54175 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0210498-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvxq4x
title: Occurrence Download

description: A dataset containing 5098 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phoradendron piperoides (Kunth) Trel."
 ]
}

 The dataset includes 5098 records from 234 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001981-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v67bnt
title: Occurrence Download

description: A dataset containing 66332 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhodiola L."
 ]
}

 The dataset includes 66332 records from 563 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001980-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vksbv2
title: Occurrence Download

description: A dataset containing 397 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Russian Federation, Korea (Democratic People’s Republic of), Korea, Republic of)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salamandrella tridactyla Nikolskii, 1905"
 ]
}

 The dataset includes 397 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001985-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14228937
title: Gefell Stadt Apotheke

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope):

https://kalliope-verbund.info/ead?ead.id=DE-611-BF-70963

Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.24355/dbbs.084-202306231402-0
title: Gene expression data sets of selected plant species

description: RNA-seq data sets of various plant species were retrieved from the Sequence Read Archive. Gene expression was analyzed in all species via kallisto v0.44 based on annotated coding sequences.
DOI: 10.15468/dl.5ku86p
title: Occurrence Download

description: A dataset containing 600 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phoradendron planiphyllum Kuijt"
 ]
}

 The dataset includes 600 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001986-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13946591
title: Performance Advancements in P-Type TaFeSb-Based Thermoelectric Materials through Composition and Composite Optimizations

description: The full data sets for the manuscript "Performance Advancements in P-Type TaFeSb-Based Thermoelectric Materials through Composition and Composite Optimizations" by Naderloo, et al.

The paper is published in Energy & Environmental Science: https://doi.org/10.1039/D4EE04819A
DOI: 10.5281/zenodo.13946590
title: Performance Advancements in P-Type TaFeSb-Based Thermoelectric Materials through Composition and Composite Optimizations

description: The full data sets for the manuscript "Performance Advancements in P-Type TaFeSb-Based Thermoelectric Materials through Composition and Composite Optimizations" by Naderloo, et al.

The paper is published in Energy & Environmental Science: https://doi.org/10.1039/D4EE04819A
DOI: 10.15468/dl.v8ht3e
title: Occurrence Download

description: A dataset containing 520 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phoradendron platycaulon Eichler"
 ]
}

 The dataset includes 520 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001987-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rcc5zp
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phoradendron poeppigii (Tiegh.) Kuijt"
 ]
}

 The dataset includes 64 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001988-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rw2n7n
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phocoena phocoena (Linnaeus, 1758)"
 ]
}

 The dataset includes 227 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001989-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24355/dbbs.084-202311010959-0
title: Mini Buoy measurements to evaluate flooding frequency and duration in the salt marsh from January 2022 to March 2023 (Spiekeroog and Butjadingen, Germany)

description: This dataset details the data collected by a Mini Buoy using the method presented in Balke et al. (2021) in the low marsh on Spiekeroog, Germany from January 2022 to March 2023 in a monthly resolution. A first analysis looking at data until July 2022 is presented in Keimer et al. (2023). Furthermore, Mini Buoy data collected in Butjadingen from March 2022 to March 2023 is included as well. This dataset includes the y acceleration measured by the Mini Buoy for two locations.
DOI: 10.18419/darus-4576
title: Data related to Panzer: A Machine Learning Based Approach to Analyze Supersecondary Structures of Proteins

description: &lt;p&gt;This entry contains the data used to implement the bachelor thesis.
It was investigated how embeddings can be used to analyze supersecondary structures.&lt;/p&gt;

&lt;p&gt;Abstract of the thesis:&lt;/p&gt;
&lt;p&gt;This thesis analyzes the behavior of supersecondary structures in the context of embeddings. For this purpose, data from the Protein Topology Graph Library was provided
with embeddings. This resulted in a structured graph database, which will be used
for future work and analyses. In addition, different projections were made into the
two-dimensional space to analyze how the embeddings behave there.&lt;/p&gt;

&lt;p&gt;In the Jupyter Notebook 1_data_retrival.ipynb the download process of the graph files from the Protein Topology Graph Library (&lt;a href="https://ptgl.uni-frankfurt.de"&gt;https://ptgl.uni-frankfurt.de&lt;/a&gt;) can be found. The downloaded .gml files can also be found in graph_files.zip. These form graphs that represent the relationships of supersecondary structures in the proteins. These form the data basis for further analyses.&lt;/p&gt;

&lt;p&gt;These graph files are then processed in the Jupyter Notebook &lt;a href="https://darus.uni-stuttgart.de/file.xhtml?persistentId=doi:10.18419/darus-4576/4"&gt;2_data_storage_and_embeddings.ipynb&lt;/a&gt; and entered into a graph database. The sequences of the supersecondary and secondary structures from the PTGL can be found in fastas.zip.&lt;br/&gt;
The embeddings were also calculated using the ESM model of the Facebook Research Group (huggingface.co/facebook/esm2_t12_35M_UR50D), which can be found in three .h5 files. These are then added there subsequently.
The whole process in this notebook serves to build up the database, which can then be searched using Cypher querys.&lt;/p&gt;

&lt;p&gt;In the Jupyter Notebook 3_data_science.ipynb different visualizations and analyses are then carried out, which were made with the help of UMAP.&lt;/p&gt;

&lt;p&gt;For the installation of all dependencies, it is recommended to create a Conda environment and then install all packages there.
To use the project, PyEED should be installed using the snapshot of the original repository (source repository: &lt;a href="https://github.com/PyEED/pyeed"&gt;https://github.com/PyEED/pyeed&lt;/a&gt;).&lt;br/&gt;
The best way to install PyEED is to execute the pip install -e . command in the pyeed_BT folder. The dependencies can also be installed by using poetry and the .toml file.&lt;/p&gt;
&lt;p&gt;In addition, seaborn, h5py and umap-learn are required.&lt;/p&gt;
&lt;p&gt;These can be installed using the following commands:&lt;/p&gt;
&lt;pre&gt;
pip install h5py==3.12.1
pip install seaborn==0.13.2
umap-learn==0.5.7
&lt;/pre&gt;
DOI: 10.15468/dl.zgvrx6
title: Occurrence Download

description: A dataset containing 3343 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "OccurrenceStatus is Present",
 "TaxonKey is Boletus edulis Bull."
 ]
}

 The dataset includes 3343 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001990-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24355/dbbs.084-202311010949-0
title: Field measurements of geometrical and mechanical properties of Spartina anglica on Spiekeroog, Germany, from December 2021 to December 2022

description: This dataset details the data collected by Keimer et al. on Spiekeroog. The investigated species is Spartina anglica, which is dominating the low marsh. Each month, geometrical and mechanical properties were measured and determined using three-point bending tests. Further information can be found in Keimer et al. (2023) on the proposed phenological states. In total, 1746 specimen were measured and 702 specimen were investigated mechanically.
DOI: 10.15468/dl.7tewss
title: Occurrence Download

description: A dataset containing 106559 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Galeopsis bifida Boenn."
 ]
}

 The dataset includes 106559 records from 499 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001962-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14228949
title: Gau-Algesheim Stadt Apotheke

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope):

https://kalliope-verbund.info/ead?ead.id=DE-611-BF-70963

Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15156/bio/sh0214489.10fu
title: SH0214489.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0214490.10fu
title: SH0214490.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.