cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/4v5t4jhhms
title: GIS dataset - Housing Stock 1951-1980 Córdoba (Spain)

description: -- DESCRIPTION -- The provided material supports a research over the residential building stock in Mediterranean areas and its potential for energy improvement. Architectural, constructive, and energy-related data of existing residential buildings dating from 1951-1980 in Córdoba, a Southern Spanish city, have been extensively compiled in a dataset supported by a Geographic Information System (GIS). Five interactive web maps that contain the data collected and the results of the research are hereby provided. The generated tool is expected to help interested stakeholders in decision-making processes, and encourage the upgrading of the city stock to reach the goals set for existing buildings within the European framework. -- INSTRUCTIONS -- The structure of the GIS dataset is subdivided into five compressed folders, each one containing the corresponding interactive web map: - 01 GIS Identification and definition - 02 GIS Architectural characterization - 03 GIS Constructive definition - 04 GIS Energy assessment - 05 GIS Scenarios for energy improvement The subsequent steps need to be followed to surf on the GIS dataset: 1. STEPS FOR A START To fully consult the provided data, it needs to be downloaded to the PC. The five different compressed folders can be downloaded separately and consulted independently. IMPORTANT NOTE: all the files contained in each of the five folders must remain together. Take caution when moving any of the downloaded folders to a different PC route. 2. LAUNCH THE INTERACTIVE WEB MAPS To open the interactive web maps you must dive into each folder and click on the *.html file that will be named similarly to the host folder. All *.html files can be launched in any internet browser. 3. NAVIGATE THE INTERACTIVE WEB MAPS Once an interactive web map is launched in the browser, it appears at its whole extent. Zooming in and out, and panning over the page is enabled and will provide for a higher level of detail. 4. MANAGE THE INTERACTIVE LEGEND Each web map contains an interactive legend with ticked boxes that reveal the activation or deactivation of the information layers. Top layers overlap the bottom ones downwards, in the same order of appearance in the legend. Hence to consult the hidden ones, the layers above need to be deactivated (unticked). 5. CONSULT THE BUILDINGS INFORMATION Graphical entities within each information layer will appear provided their host layer is switched on. The information of each building will appear in a pop-up window whenever a graphical entity is selected.
DOI: 10.3535/58b-0my-3rf
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y5m-90c-pkt
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ml2-4t3-w3a
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pb0-d9b-p2p
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tmh-h85-dsh
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23097608.v1
title: Conditional nucleotide diversity

description: Conditional nucleotide diversity (CND) calculated for a set of Mesolithic and Neolithic individual pairs as described in Skoglund et al. (2014). Skoglund, P. <em>et al.</em> Genomic diversity and admixture differs for stone-age Scandinavian foragers and farmers. <em>Science (80-. ).</em> <strong>344</strong>, 747–750 (2014).
DOI: 10.6084/m9.figshare.26356342.v1
title: Figshare repository for NCOMMS-23-38372B: <b>"Variations in plume activity reveal the dynamics of water-filled faults on Enceladus</b>" by Ondrej Soucek, Marie Behounkova, Martin Lanzendorfer, Gabriel Tobie, Gael Choblet. 2024

description: This is a Figshare repository to the manuscript "<b>Variations in plume activity reveal the dynamics of water-filled faults on Enceladus</b>" by Ondrej Soucek, Marie Behounkova, Martin Lanzendorfer, Gabriel Tobie, Gael Choblet, submitted to Nature Communications (NCOMMS-23-38372B).Manuscript abstract: After discovering a jet activity near the south pole of Saturn's moon Enceladus, the Cassini mission demonstrated the existence of a subsurface water ocean with a unique sampling opportunity through flybys. Diurnal variations in the observed brightness of the plume suggest a tidal control, although the existence and timing of two activity maxima seem to contradict stress analysis predictions. Here, we re-interpret the observed plume variability by combining a 3D global model of tidal deformation of the fractured ice shell with a 1D local model of transport processes within south-polar faults. Our model successfully predicts the observed plume's temporal variability by combining two independent vapour transport mechanisms: slip-controlled jet flow and normal-stress-controlled ambient flow. Moreover, it provides a possible explanation for the differences between the vapour and solid emission rates during the diurnal cycle and the observed fractionation of the various icy particle families. Our model prediction could be tested by future JWST observations targeted when Enceladus is at different positions on its orbit and could be used to determine the optimal strategy for plume material sampling by future space missions. <br>
DOI: 10.6084/m9.figshare.28559339.v2
title: The role of Trees of Fragmenting Granules (TFG) in the formation of the solar supergranular pattern from Hinode observations

description: We present an exceptional scientific dataset allowing to investigate the structure and evolution of the interior of solar supergranulation cells. Trees of Fragmenting Granules (TFG) and associated flows were evidenced using Local Correlation Tracking techniques (LCT) from a 24 H duration sequence of Hinode (JAXA/NASA) observations. The treatment of the dataset exhibits the evolution of the TFG and shows that their mutual interactions are able to build horizontal flows with longer lifetime than granules (1 to 2 hours) over a scale of 10 arcsec (the mesogranulation). These flows act on the diffusion of the intranetwork magnetic elements and also on the location and shape of the network. Hence, the TFG appear as one of the major elements involved in supergranular formation and evolution.
DOI: 10.6084/m9.figshare.4573021.v3
title: Dallas lifespan brain study anatomical segmentations

description: http://fcon_1000.projects.nitrc.org/indi/retro/dlbs.html segmentations for the anatomical images<br>summary demographics file: dlbs_demog.csv<br>template in: template.zip p.p1 {margin: 0.0px 0.0px 0.0px 0.0px; font: 14.0px Menlo; background-color: #fef49c} span.s1 {font-variant-ligatures: no-common-ligatures} <br>Affine transformations to the template in file: toTemplateAffineMaps.zip p.p1 {margin: 0.0px 0.0px 0.0px 0.0px; font: 14.0px Menlo; background-color: #fef49c} span.s1 {font-variant-ligatures: no-common-ligatures}
DOI: 10.3535/8jp-b6z-63c
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d9g-3r0-e64
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19236774.v2
title: Raw reads of Cucurbita moschat F2 population (Nigerian Local X Butterbush) PRSV resistant pool.

description: The data represents raw reads obtained by resequencing 10 PRSV resistant F2 individuals derived by crossing PRSV resistant (Nigerian Local) with PRSV susceptible (Butterbush). Equal concentration of DNA from the 10 individuals were pooled together and re-sequenced.
DOI: 10.6084/m9.figshare.23535423.v3
title: Supplementary Tables for "Association of polygenic score with tumor molecular subtypes in papillary thyroid carcinoma"

description: Thyroid cancer molecular subtypes and polygenic score
DOI: 10.6084/m9.figshare.26197748.v1
title: Large herbivores dung seed bank drive seed circulation in an alpine meadow

description: This is data availability statement for the manuscript entitled Large herbivores dung seed bank drive seed circulation in an alpine meadow (Wang and Hou, 2024).
DOI: 10.3535/rc0-kg3-q5q
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/208-vlj-9l4
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5lb-yxb-xfd
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v8l-bma-nkq
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gec-rk2-d33
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13565201.v1
title: kraken2_output.tar.gz

description: Kraken 2 output for draft assemblies of 82 KpSC strains. First to fourth columns are included.
DOI: 10.3535/bc7-jpn-b36
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/csw-8lh-v1y
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19807477.v1
title: Land cover maps for Jamanxim National Forest in Brazil for 2008 & 2018

description: Maps were generated using a supervised classification (with a random forest classifier). We used Landsat satellite imagery (L5 and L7 for 2008 and L7 and L8 for 2018), elevation, EVI, and EVI difference as input variables. <br> <br> Land cover codes used in the rasters: 1: Agriculture 2: Forest 3: Bare soil 4: Urban 5: Water 6: Desert 7: Wetland <br> For additional information, see Kinnebrew et al. 2022 (PLOS ONE) DOI: 10.1371/journal.pone.0268970
DOI: 10.17632/66ynzwm63d
title: BPM1 regulates  RdDM-mediated DNA methylation via a cullin 3 independent mechanism

description: AtBPM1 regulates DDR complex activity and RdDM mediated DNA methylation via a cullin 3 independent mechanism

Mateja Jagić1§, Tamara Vuk1§, Andreja Škiljaica1, Lucija Markulin1, Vedrana Vičić Bočkor1, Mirta Tokić1, Karlo Miškec1, Genadij Razdorov2, Siniša Habazin2 Marko Šoštar3, Igor Weber3, Nataša Bauer1, Dunja Leljak Levanić1*

1Division of Molecular Biology, Department of Biology, Faculty of Science, University of 11 Zagreb, Zagreb, Croatia
2Genos Glycoscience Research Laboratory, Zagreb, Croatia
3Division of Molecular Biology,Institute Ruđer Bošković, Zagreb, Croatia

* Correspondence:
Dunja Leljak Levanić
dunja@zg.biol.pmf.hr

§ Both authors contributed equally to this work

Abstract

The best-known function of MATH-BTB proteins, including those from Arabidopsis (the BPM proteins) is their role as substrate-specific adaptors of CUL3-based E3 ligases in the ubiquitin proteasome pathway. In this process, BTB domain enables assembly with the CUL3, while less conserved MATH domain serves as an adaptor and binds substrates destined for degradation via 26S proteasome. Here, we report a new CUL3 independent role of AtBPM1 in RNA directed DNA methylation (RdDM). Proved by different interaction assays, nuclear fraction of BPM1 interacted with DMS3 and RDM1 proteins, the components of the chromatin remodeling DDR complex that is involved in positioning of RdDM methylation machinery. BTB domain itself had a strong interaction affnity for RDM1, while MATH domain itself, despite detected interactions with both partners, was not essential for the interactions, both suggesting that DMS3 and RDM1 are not substrates for proteasomal degradation. Moreover, in transgenic line lacking a functional CUL3-based E3 ligase complex, DMS3 remained ubiquitinated and the levels of DMS3 did not differ between BPM1-overexpresing plants and wild type. Finally, increased CHH methylation status of the two RdDM controled genes, FWA and CLM41 in BPM1-overexpressing plants confirmed that BPM1 does not participate in DMS3 and RDM1 degradation, instead it is involved in recruitment of the RdDM to specific chromatin positions destined for de novo DNA methylation.
DOI: 10.17632/mchrwr4x9x
title: LINF_110011100

description: EGF domain-specific O-linked N-acetylglucosamine transferase; Leishmania infantum (strain JPCM5)
DOI: 10.3535/28l-bml-syd
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rmc-zwb-7hy
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/02l-47a-01k
title: †Athyrididina Boucot et al., 1964

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4g9-q89-n3q
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27324201.v2
title: production_data

description: This dataset is a subset of our GVHD dataset, originally created for a Retrieval-Augmented Generation bot to provide information on GVHD, now augmented with selected toxic inputs to enhance resilience in handling challenging queries.
DOI: 10.17632/nbjwktymrg
title: Estimating preferences for Mediterranean deep-sea ecosystem services: a discrete choice experiment

description: Data on choice experiment on Mediterranean deep-sea ecosystem services
DOI: 10.3535/aha-3py-pbr
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fyw-f6z-588
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fj3-ra6-42e
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jws-kvq-stp
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12638957.v1
title: Raw data and code for epidemiological model

description: Files in this folder contain data collected from parasite adaptation assays.<br>1. Dispersal_data: number of infected individuals observed in dispersal patch (n_I_DISPERSERS) and number of infected in resident tube (n_I_RESIDENT) for each unique combination of Host genotype, selection line and experimental block.2. Infectivity_data: number of infected and uninfected individuals on day 4 post inoculation for each culture; unique combinations of host genotype and selection line.3. Infectiousness_data: number of host with infectious stages of infection over time (days post infection, DPI). Unique host genotype and selection line combinations are measured over a sliding-window as explained in the text.4. Virulence data: data collected from the virulence assay. The maximum number of paramecia observed in each culture (n_paramecium_max) and the number of paramecium at day 20 (n_paramecium_dat20), for each combination of infected and uninfected host genotype and selection lines. Column survive_day (and column censor) refer to the day that each culture goes extinct, or are alive at experimental termination on day 20.5. Movement_data: swimming speed (net_speed_mean) and turning angle (sd_turning_mean) for each culture; unique combinations of infected and uninfected host genotype and selection line.<br>And, a compressed file contains the code and data used to fit the epidemiological model. Specified details and readme is provided within the folder.
DOI: 10.3535/p7e-9mg-106
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/thq-l0x-w4f
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19379906.v1
title: Data and Results "Prevalence of sexually transmissible infections in adolescents treated in a family planning outpatient clinic for adolescents in the western Amazon."

description: The objective of this study was to evaluate the prevalence of STIs (chlamydia, gonorrhea, trichomoniasis, herpes simplex virus, syphilis, HIV, hepatitis B, hepatitis C) in adolescents treated at a family planning outpatient clinic in the western Amazon: Porto Velho, Rondônia, Brazil.
DOI: 10.6084/m9.figshare.8241401.v1
title: The late blooming amphipods: global change promoted post-Jurassic ecological radiation despite Palaeozoic origin

description: The dataset contains a sequence alignment (in nexus format consisting of concatenated sequences of COI, H3, 28S and 18S), a maximum likelihood phylogram (obtained with IQTREE) and a time calibrated Bayesian phylogeny (obtained with BEAST).
DOI: 10.17632/fgsw49mc9k
title: Raw data for paper - Distinct dynamics of theta and gamma rhythmicity during social interaction suggest differential mode of action in the medial amygdala of SD rats and C57BL/6J mice

description: The following dataset holds the data extracted using "Distinct dynamics of theta and gamma rhythmicity during social interaction suggest differential mode of action in the medial amygdala of SD rats and C57BL/6J mice" by Shanah Rachel John, Wael Dagash, Alok Nath Mohapatra, Shai Netser, and Shlomo Wagner.
DOI: 10.3535/axx-eat-tgn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5114080.v1
title: Quercus robur chorology

description: Distribution map of pedunculate oak (<i>Quercus robur</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geodatabases and scientific literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix “plg”), which define continuous areas of occupancy of the species, and with point features (name suffix “pnt”), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix “syn”).<br>All polygon borders delimiting the range are generalized across the mainland and sea boundaries, and not clipped to a specific coastline. This offers the possibility to mask sea areas, or to clip and extract the terrestrial range parts using GIS data layers of the users’ choice. <br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007 <br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.17632/wf4h3s58fp
title: LINF_120012700

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.3535/52l-exl-cem
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/esb-ml1-q79
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/gdj64y22dz
title: MS1 freeze valve experimental and simulation data

description: Temperatures measured by thermocouples TC10T and TC10B in the freezing experiment of the MS1 loop.
Temperature measurements at locations of thermocouples TC10T and TC10B obtained in STAR-CCM+ simulations of the freezing experiment.
DOI: 10.3535/a3g-bz7-lh1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pw1-mmc-9ex
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ynn-m62-0hf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zbg-3hg-0ce
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a0r-j9q-4fv
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y8m-f15-b1l
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/eb1-yn8-rtz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/g2m-raf-6s9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19376666.v1
title: Fastq Files

description: Fastq files of metabarcoding.<br>
DOI: 10.17632/f6j9nsyy7h
title: Green Jobs Research Data (1984-2021)

description: The green jobs research and publication dataset, which was indexed by Scopus from 1984 to 2021. The dataset contains data authors, authors ID Scopus, title, year, source title, volume, issue, article number in Scopus, DOI, link, affiliation, abstract, index keywords, references, Correspondence Address, editors, publisher, conference name, conference date, conference code, ISSN, language, document type, access type, and EID.
DOI: 10.3535/7dz-ez2-7h3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ggx-g9k-hv2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nlx-ad4-29a
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sry-2cf-9y2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14788014.v1
title: Paraphrynus_williamsi_raw_photos

description: Raw photos from which pedipalp outlines were constructed for the paper "Assessing the patterns and drivers of shape complexity in the amblypygid pedipalp", Ecology and Evolution, 2021
DOI: 10.6084/m9.figshare.14897697.v5
title: Histology Data

description: Histology Data<br><br>
DOI: 10.3535/0mx-lzr-ysc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1cl-555-73x
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.7uaspm
title: Occurrence Download

description: A dataset containing 2690 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Données NEO-Observations NEO (saisies avec l'outil géonature OccTax)",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Tettigoniidae, Gryllidae, Gryllotalpidae, Trigonidiidae, Oecanthidae)"
 ]
}

 The dataset includes 2690 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009647-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.