cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22249894.v2
title: scirpy example datasets for v0.13

description: Example datasets for scirpy.
<br>
The datasets follow the new data structure introduced in v0.13.
DOI: 10.6084/m9.figshare.25410412.v2
title: Jacquay ID Data.xlsx

description: Short-term transportation of insulin dysregulated (ID) and non-ID horses.
DOI: 10.6084/m9.figshare.27284808.v1
title: Data Extract MNP Nephrotoxicity

description: This systematic review was aimed to explore the potential harmful effects of microplastics toward renal and urinary organs. This study was made according to PRISMA 2020 guidelines and used SYRCLE tool as the method of risk of bias assesment. This review included 77 studies that were published from 2017 to 2024 from various databases, such as PubMed, ScienceDirect, Taylor & Francis, SpringerLink, Wiley Online Library, and ProQuest with PECOS inclusion criteria of 1) Population: Animal; 2) Exposure: All types of exposure to micro and/or nanoplastics; 3) Comparison: Placebo/ control; 4) Outcome: Nephrotoxicity, oxidative stress, inflammation, deposition and abnormal structure; and 5) Study design: In vivo experimental study.
DOI: 10.6084/m9.figshare.19145912.v3
title: Contents of inflammatory cytokines IL-6, TNF-α and TGF-β1 in serum and BALF

description: Supplementary information for the papaer "Scorpion venom polypeptide inhibits pulmonary epithelial-mesenchymal transition in systemic sclerosis-interstitial lung disease model mice by intervening TGF-β1/Smad signaling pathway"
DOI: 10.6084/m9.figshare.28107578.v1
title: ComFilE for AD

description: Serum SERS spectra of Alzheimer's disease, Mild Cognitive Impairment and control.
DOI: 10.6084/m9.figshare.6203264.v1
title: Supporting Data for "Strelka2: Fast and accurate variant calling for germline and somatic sequencing applications"

description: This fileset includes supporting data files describing:<br>1. The SNV and Indel truth set used to evaluate accuracy on <i>in silico</i> mixtures of germline samples.- InSilicoMix_snvs.vcf.gz- InSilicoMix_indels.vcf.gz- InSilicoMix_falsePositiveRegions.bed.gz<br>2. The list of chromosomes included for analyses using the GRCh38+Decoy reference.- GRCh38DecoyCallableChroms.bed.gz
DOI: 10.17632/kdykty89xn
title: Supplemental material for Pneumocystis jirovecii pneumonia (PJP) Prophylaxis in Patients with Chronic Inflammatory Skin Diseases: A systematic review and meta-analysis

description: Supplemental material for 2024 manuscript by Rahman and Gniadecki (Pneumocystis jirovecii pneumonia (PJP) Prophylaxis in Patients with Chronic Inflammatory Skin Diseases: A systematic review and meta-analysis)
DOI: 10.6084/m9.figshare.28883669.v1
title: Myography data - Vascular reactivity after 2 weeks of very low calorie diet

description: Effects of severe food restriction (sFR) on vasomotricity in mesenteric arteries from male rats.
DOI: 10.6084/m9.figshare.3985422.v1
title: ESM2_as-dep_nanostructuredITO-GOPTS from Organosilane-functionalization of nanostructured indium tin oxide films

description: XPS data for GOPTS-coated as-deposited nanostructured ITO surfaces
DOI: 10.6084/m9.figshare.20449701.v2
title: QM9x

description: QM9x is a dataset that contains DFT calculations of energy and forces for all configurations in QM9 recalculated with the wb97x functional and 6-31G(d) basis set. Recalculating the energy and forces causes a slight shift of the potential energy surface which results in forces acting on most configurations in the dataset. <br> The choice of basis set and functional makes the QM9x compatible with the Transition1x and the ANI1x dataset. <br> see https://arxiv.org/abs/2207.12858 for comparison between ANI1x, QM9x and Transition1x. <br> Dataloaders and example scripts are availble in https://gitlab.com/matschreiner/QM9x <br> Please cite as Transition1x - Force and Energy Calculations of Millions of Near-Transition State Molecular Configurations, <br> and the original QM9 dataset.
DOI: 10.17632/9t68rbsz8w
title: Dataset for: Translation and Validation of the Arabic International Adjustment Disorder Questionnaire among Patients with Physical Illness and their Families in Iraq

description: Adjustment disorder (AjD) is common among patients with physical conditions and their family members, albeit frequently neglected, leading to a high rate of transition to more severe mental conditions and a high risk of suicide. This neglect is particularly apparent in middle- and lower-income countries, including Iraq, where the lower mental health coverage means that most primary and secondary care centers might not have sufficient capacity to assess AjD.

Our study aims to address both issues by being the first Arabic validation of the IADQ, a self-administrated instrument for AjD, and the first validation on a clinical sample of patients with physical conditions and their family members. Robust statistical methods were utilized to address issues of data normality while assessing structural validity, and regression instead of correlation was used to assess concurrent validity to assess multicollinearity.

We found that the Arabic adaptation of the IADQ shows a valid 2-factor structure that corresponds to the ICD-11 diagnostic criteria. The 2-factor structure showed favorable reliability and concurrent validity and could be utilized in clinical settings. However, due to multicollinearity, we demonstrated that an equally reliable and valid total scale might be more appropriate for research. The two factors of preoccupation and failure to adapt were highly related but more distinct compared to previous validations, which provided supportive evidence for the hypothesis that these constructs are less ambiguous with more advanced forms of AjD present in clinical samples. We believe that these findings offer a significant contribution to the field and would be of interest to the readers of your journal.
DOI: 10.6084/m9.figshare.23166755.v1
title: 30s Bosco Jump Data

description: Force-Time Data for all 30s Bosco jump trials
DOI: 10.6084/m9.figshare.8276750.v1
title: Sperm Motility

description: Raw data sperm motility and results of statistical analysis<br>
DOI: 10.17632/rztknhvtzh
title: The Coercive Power of Manipulation in Propagandistic Discourses

description: The paper explores how manipulation, a fundamental part of human communication, is pivotal in political, religious, and advertising discourses. It discusses how both left and right political factions accuse each other of manipulating public opinion. The hypothesis posits that manipulation plays a coercive role in communication, particularly through propaganda, which is a communicative phenomenon driven by power entities seeking dominance. Propaganda is universal and transhistorical, reflecting the consistent intention of power. The study highlights how manipulation, as defined by linguist Teun van Dijk, involves the abuse of power to influence others detrimentally. The paper explains that propaganda and manipulation are intertwined, with the former being the message's content and the latter its expression. The text also examines the structure of manipulative discourses, emphasizing victimization and the identification of enemies. It contrasts constructive propaganda, which allows for public comparison and reasoning, with negative propaganda in totalitarian regimes, which suppresses opposing views to maintain control. Examples from various political leaders illustrate these dynamics. The study concludes that manipulation is central to propaganda, with coercion and subjugation as its bases, crucial for achieving power and control.
DOI: 10.6084/m9.figshare.27961362.v1
title: Effects of the Social Acoustical Environment on Zebra Finch Auditory Electrophysiology

description: These data are from a study of the effects of the early social-acoustical environment on the responses of neurons in the auditory pallium of zebra finches to conspecific songs presented on their own or embedded in synthetic colony noise. The data files include the stimuli used in the study and the spike time responses from single units recorded using extracellular electrophysiology.
DOI: 10.6084/m9.figshare.13496997.v1
title: The Impact of Surface Composition on the Interfacial Energetics and Photoelectrochemical Properties of BiVO4

description: The ability to engineer the photoelectrode surface is pivotal for optimizing the properties of any photoelectrode used for solar fuel production. Altering crystal facets exposed on the surface of photoelectrodes has been a major strategy to modify their surface structure. However, there exist numerous ways to terminate the surface even for the same facet, which can considerably alter the photoelectrode properties. Here, we report tightly integrated experimental and computational investigations of epitaxial BiVO4 photoelectrodes with V-rich and Bi-rich (010) facets. Our study demonstrates that even for the same facet the surface Bi:V ratio has a remarkable impact on the interfacial energetics and photoelectrochemical properties. We also elucidate the microscopic origins of how the surface composition can affect the photoelectrochemical properties. This study opens an unexplored path for understanding and engineering surface energetics via tuning the surface termination/composition of multinary oxide photoelectrodes.<br>(To access dataset, use the link above or visit https://qresp.org/ on the University of Chicago node)<br>
DOI: 10.6084/m9.figshare.6076082.v1
title: Experiences of Using the Toll Free Telephone Line to Access Maternal and Newborn Health Services in Central Uganda: A Qualitative Study

description: Maternal mortality remains a significant public health challenge in Sub-Saharan Africa. Most of these deaths are preventable and can be addressed with low cost, effective interventions with an understanding of the <i>three delays</i> associated with maternal morbidity and mortality. This qualitative study used Focused Group Discussions (FGDs) to collect data in four health facilities. A total of 10 FGDs were conducted; two with health workers, four with women, and another four with both men and women. Each session lasted 45-60 minutes and had a moderator, observer and note taker. All discussions were audio recorded after obtaining consent from the participants. Interviews were transcribed verbatim and translated to English from audio recordings. Data analysis was performed using the thematic analysis with major themes determined appriori while sub themes emerge using QDA DATA Miner software. This data comprises of 10 full text transcripts from the group discussion sessions<br><br><br><br>
DOI: 10.17632/4z8z2tm7dh
title: LINF_170020700

description: Nicotinamide Mononucleotide Adenylyltransferase | NMNAT; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.27985502.v1
title: The supplementary data for Measuring the Causal Effect of Urban Environments on Crime with Street View Images and Points of Interest.zip

description: The supplementary data for Measuring the Causal Effect of Urban Environments on Crime with Street View Images and Points of Interest
DOI: 10.6084/m9.figshare.28202699.v3
title: profile HMMs, alignments, and phylogenetic trees

description: Folder "HMMs" contains profile HMMs used for HMMER searches of proteins of membrane-trafficking system (MTS) in diplonemids.Folder "diplonemids_trees" contains full (xxx.mafft.aln) and trimmed (xxx.trimal.aln) alignments and tree files in Newick format (xxx.mb+raxml.tre) for phylogenetic analyses of diplonemid MTS proteins.Folder "mantamonas_tree" contains full (xxx.mafft.aln) and trimmed (xxx.trimal.aln) alignments and tree files in Newick format for phylogenetic analyses (xxx.mb+raxml.tre) of <i>Mantamonas</i> MTS proteins.<br>
DOI: 10.6084/m9.figshare.11787333.v2
title: Notre-Dame Cathedral Fire dataset

description: <b>Notre-Dame Cathedral Fire Dataset</b><b># of images: </b>1,657 images during or after the fire<br>If you use the dataset, please cite the following works:<br>Padilha, Rafael and Andaló, Fernanda A. and Pereira, Luís A. M. and Rocha, Anderson. "Unraveling the Notre Dame Cathedral fire in space and time: an X-coherence approach,” in Crime Science and Digital Forensics: A holistic view. CRC Press by Taylor and Francis Group.<br><br>Padilha, Rafael and Andaló, Fernanda A. and Rocha, Anderson. “Improving the chronological sorting of images through occlusion: A study on the Notre-Dame cathedral fire,” in 45th International Conference on Acoustics, Speech, and Signal Processing (ICASSP), 2020. <br><br><br><br><br><b>Description of the event and data collection: </b>On April 15th, 2019, large parts of Notre-Dame Cathedral's structure and spire were devastated by a fire. People worldwide followed the tragic event through images and videos that were shared by the media and citizens.<br>From the generated imagery, we collected a total of 23,683 images posted on Twitter during and on the day after the fire. Even though most of them were related to the event, several were memes, cartoons, compositions and artwork, while some depicted the cathedral before the fire. As we focus on learning how the fire and appearance of the cathedral evolved during the event, we removed them, reducing our set to 5,206 relevant images. Among these, several examples were duplicates or near-duplicates of other images. Considering their little contribution to the training process, after their removal, we were left with 1,657 distinct images related to the event. The cleaning process involved using methods such as local sensitive hashing for filtering near-duplicates, and semi-supervised approaches based on Optimum-path Forest theory to mine for relevant and non-relevant imagery of the event. By analyzing the event's description, four main sub-events can be defined: <i>spire on fire</i>, <i>spire collapsing</i>, <i>fire continues on roof</i>, and <i>fire extinguished</i>. Each sub-event contains specific visual clues (e.g., the absence of the central spire) that can be leveraged to estimate the temporal position of an image. Each image in the dataset was manually labeled as being captured in one of these sub-events. We also consider an <i>unknown</i> category for images that do not contain any hint of the sub-event in which they were captured, such as zoom-ins of the cathedral's facades.<br>Besides that, each image was annotated with respect to the intercardinal direction of the cathedral’s facade being depicted in the image (<i>north, northeast, east, southeast, south, southwest, west, northwest).</i>
DOI: 10.6084/m9.figshare.21514272.v3
title: Reliable estimation of tree branch lengths using deep neural networks

description: Supplementary data for Reliable estimation of tree branch lengths using deep neural networks
DOI: 10.6084/m9.figshare.26340732.v1
title: Swimming_speed_calculator.xlsx from 3-D shape of natural riblets in a great white shark: relationship between the denticle morphology and swimming speed of sharks

description: Swimming speed can be calculated by entering ridge spacing, distance from the leading tip, and target s+ values.
DOI: 10.6084/m9.figshare.28811315.v1
title: Amblyopinina Data Geisler et al. 2025_16_04_2025

description: Data on the interactions between Amblyopinina and their mammal hosts.
DOI: 10.6084/m9.figshare.24106161.v3
title: Data from: No universal mathematical model for thermal performance curves across traits and taxonomic groups

description: This repository contains two compilations of thermal performance datasets of a) biological traits and b) individual enzymes of ectotherms from the literature.<br><br>The two tables include:an id for each thermal performance datasetthe organism (taxon column)taxonomy information (kingdom and phylum columns)the enzyme name (if applicable)trait information (trait, broad_trait_group, specific_trait_group columns, if applicable)trait units (trait_unit_SI column)the experimental temperature in °Ctrait/enzyme measurements (trait_value column)the study from which data were obtained (citation column)
DOI: 10.17632/c95ysmspfm
title: Data for: Generalizing scaling laws for mantle convection with mixed heating

description: These files include the numerical measurements presented in Tables 1, 3, and 4.
DOI: 10.6084/m9.figshare.24827661.v1
title: <b>Data </b><b>from </b><b>A meta-analysis of peatland microbial diversity and function responses to climate change</b>

description: Database on microbial responses to climate change in peatlands. This file contains the effect sizes (EF) calculated for microbial richness, diversity, abundance and functions, as well as their variance (EF_var_g) and p-value (EF-pvalue), along with metadata (coordinates, community type, function, etc). <br>
DOI: 10.17632/6gyvj25pty
title: The Impact of Aesthetics, Technological Optimism, and Technological Innovativeness mediated by Gender on the Acceptance of VR for the Education of Electrical Circuits

description: AE is aesthetic; ATU is attitude toward using; BIU is behavioral intention to use; PEOU is perceived ease of use; PU is perceived usefulness; TI is technology innovativeness; TO is technology optimism; Sex (1 Male, 0 Female)
DOI: 10.6084/m9.figshare.24268762.v4
title: <b>Dataset comparing the effectiveness of perineal cold pack application over oral 1000mg paracetamol intake in perineal pain relief among postnatal women after spontaneous vaginal delivery in Dodoma region.</b>

description: Vaginal delivery is the common and safest standard model of childbirth worldwide<b>. </b>However, it is associated with perineal trauma, which limits the woman’s mobility, quality of life, and ability to care for her baby comfortably. The study aimed to test the effectiveness of perineal cold pack application on postpartum perineal pain and timely breastfeeding initiation among post-delivery mothers after Spontaneous Vaginal Delivery (SVD). This randomized control clinical trial recruited 228 post-partum mothers (114 participants in the intervention group and 114 in the control group). The participants were randomly allocated to either an intervention or control group. The intervention group received the cold pack, while the control group received the Paracetamol 500mg. Data were collected using a standardized questionnaire and then analyzed using Stata™ software (StataCorp LLC, College Station, TX, US) version 14. The estimate of the effect of the intervention was measured using an analysis of variance. Omega square test was used to establish the effect size.A cold pack reduces perineal pain intensity following soft tissue injury after spontaneous vaginal delivery. It is practical and can be promoted to be employed in our health facility because it is cheap and available, also feeling the gap of stock and out-of-pocket to the women.
DOI: 10.6084/m9.figshare.25903345.v2
title: MortalityBirdGalapagosIndex_Output.zip

description: This data contains the abundance of bird species in the Galapagos Islands found roadkilled in Santa Cruz Road for several years. Also, the graphical Abstract
DOI: 10.6084/m9.figshare.4955465.v4
title: Global forest loss disproportionately erodes biodiversity in intact landscapes (data and code)

description: Main data set and code for our analysis of how the effects of forest loss vary depending on current forest cover. Consists of the following files:<br>1. species_data_simple.csvData set for our main analysis containing data on mammals, amphibians, and birds. Data set consists of taxonomic information, whether or not the species is tropical, was listed as threatened under range-related issues, geographic region, IUCN Red List category/trend/change, location of geographic range centroid, and averages across ranges of the following variables: 2000 forest cover, 2000-2012 forest gain, 2000-2014 forest loss, historic forest loss, and human footprint.<br>2. model_everything_simple_serial.RCode to fit our primary spatial models using logistic regression with spatial autocovariates. Models are fit separately for each response variable (category/trend/change) and level of forest dependency.<br>3. plot_models_simple.RCode to plot the primary results (logistic regression standardized coefficients). The plot produced is used in Figure 2 of our manuscript.<br>
DOI: 10.17632/2mbdw5252j
title: Supplementary data

description: Supplementary data
DOI: 10.6084/m9.figshare.13551377.v1
title: Dryas reflectance spectra from Murphy Dome

description: Leaf reflectance spectra from Dryas ajanensis, Dryas alaskensis, and their hybrids from Eagle Summit. Refer to mdb_pops.csv for metadata.
DOI: 10.6084/m9.figshare.1412636.v1
title: SMILES strings for compounds

description: SMILES strings provided for the set of compounds
DOI: 10.6084/m9.figshare.28674782.v1
title: Supplementary Material for: Yoga Asana Increases Pre-Frontal Cortex Activity and Reduces Resting State Functional Connectivity

description: Introduction: Various aspects of yoga have been researched for their psychological benefits, yet the neurological mechanisms underlying physical yoga postures (asana) remain inadequately explored due to limitations in prior neuroimaging techniques. The pre-frontal cortex (PFC) has been established as an important region of interest (ROI) concerning psychological health. Therefore, this study aimed to characterize changes in the PFC before, during and after asana by applying the functional near-infrared spectroscopy (fNIRS) mobile neuroimaging technique.
Methods: Twenty-seven healthy adults completed two 6-minute, task-independent resting-states before and after a 23-minute asana routine. With the fNIRS device positioned on the frontal region of the skull, PFC activity was measured during each asana and resting state. The block design involved alternating between three active postures and one control posture. Each active posture was performed for 30 seconds and repeated 8 times, while the control posture was held during inter-trial intervals lasting 25–30 seconds. Across the session, this block design resulted in a total of 24 active blocks (8 repetitions of each active posture) and 25 baseline blocks (control posture intervals).
Results: All three active asanas significantly increased PFC activity versus baseline, particularly in the right PFC. Furthermore, analysis of short-term changes in resting-state functional connectivity (rsFC) revealed a significant decrease, primarily in the left medial prefrontal cortex (PFC), a key region of the default mode network (DMN), an area known to exhibit heightened activity in individuals suffering from depression and anxiety
Conclusion: This study provides neurological insight into the effects of yoga asana and supports fNIRS for assessing movement-based practices in real-world settings.
DOI: 10.6084/m9.figshare.28829945.v1
title: Synthetic Reasoning - Designing AI Architectures Beyond Neural Networks with Hybrid Neuro-Symbolic Systems

description: <i>Synthetic reasoning stands at the forefront of artificial intelligence innovation, proposing a paradigm shift through the fusion of neural networks and symbolic reasoning. Hybrid neuro-symbolic systems aim to overcome the inherent limitations of conventional AI architectures, offering a pathway toward enhanced interpretability, robustness, and common-sense reasoning — attributes that are critical for high-stakes applications in healthcare, finance, and autonomous systems. This paper investigates the architectural design, practical applications, and ethical implications of these hybrid systems, highlighting their capacity to combine data-driven learning with structured, logic-based reasoning. While these architectures promise improved adaptability and decision transparency, they also present formidable challenges in scalability, complexity, and ethical governance. Addressing these obstacles is essential for developing AI systems that align with human values and societal needs. The study positions synthetic reasoning as an essential step toward bridging the divide between human cognitive flexibility and machine intelligence, paving the way for reliable and ethically resilient AI solutions.</i>
DOI: 10.6084/m9.figshare.25294945.v1
title: Surface Roughness Raw Data.xlsx

description: A raw data set of surface roughness value from 3D printed workpieces from before and after post-processing.