cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25422/azu.data.16606736
title: Data for "Effects of drying and orientation to perennial refuges on aquatic biodiversity across two basins differing in aridity"

description: Intermittent streams are globally distributed, comprise over half the length of the global river network, and are expected to become more prevalent. However, most studies of intermittent streams are conducted at extremes of scale, are limited in taxonomic and temporal scope, and focus exclusively on drying patterns. Here, we assessed how both flow intermittency and orientation to perennial refuges affect aquatic invertebrates and aquatic and semi-aquatic vertebrates across two years within two intermittent river basins differing in their aridity. We used loggers to characterize flow intermittency and wet-dry mapping to determine orientation to perennial refuge of reaches. In winter and summer 2015 and 2016, we collected and identified invertebrates and visually surveyed vertebrates. Using permutational multivariate analyses of variance with distance matrices, we found distinct invertebrate communities by basin, flow class (perennial or intermittent), and season, and distinct vertebrate communities by basin, and between flow classes and seasons in the more arid basin. Invertebrate communities had higher beta diversity in the more arid than mesic basin, whereas the opposite was true for vertebrates. We identified indicator species for all combinations of basin and flow class, perennial reaches combined from both basins, each basin, and some combinations of flow class and season within basins. Flow intermittency and orientation to perennial refuge predictors correlated well with both invertebrate and vertebrate communities. However, we did not find nestedness of communities that differed significantly from that expected by chance in response to increasing flow intermittency or distance to refuge. Lastly, basin, flow intermittency, and orientation to perennial refuge predictors were generally important for modeling taxon richness and densities, and richness and densities decreased with increasing flow intermittency and distance to perennial refuge. Collectively, our data suggest that intermittent streams harbor unique biodiversity, but also that some taxa have context-dependent responses to intermittency and orientation to perennial refuges. These findings also suggest that future increases in stream drying are likely to lead to changes to stream communities with high potential for the loss of aquatic biodiversity.<br><br><br><i>For inquiries regarding the contents of this dataset, please contact the Corresponding Author listed in the README.txt file. Administrative inquiries (e.g., removal requests, trouble downloading, etc.) can be directed to data-management@arizona.edu</i><br><i>This item is part of Data, R Code, and Supplemental Results for "Effects of drying and orientation to perennial refuges on aquatic biodiversity across two basins in California, USA". </i><i>See References, below, for the other parts.</i>
DOI: 10.25422/azu.data.16606736.v1
title: Data for "Effects of drying and orientation to perennial refuges on aquatic biodiversity across two basins differing in aridity"

description: Intermittent streams are globally distributed, comprise over half the length of the global river network, and are expected to become more prevalent. However, most studies of intermittent streams are conducted at extremes of scale, are limited in taxonomic and temporal scope, and focus exclusively on drying patterns. Here, we assessed how both flow intermittency and orientation to perennial refuges affect aquatic invertebrates and aquatic and semi-aquatic vertebrates across two years within two intermittent river basins differing in their aridity. We used loggers to characterize flow intermittency and wet-dry mapping to determine orientation to perennial refuge of reaches. In winter and summer 2015 and 2016, we collected and identified invertebrates and visually surveyed vertebrates. Using permutational multivariate analyses of variance with distance matrices, we found distinct invertebrate communities by basin, flow class (perennial or intermittent), and season, and distinct vertebrate communities by basin, and between flow classes and seasons in the more arid basin. Invertebrate communities had higher beta diversity in the more arid than mesic basin, whereas the opposite was true for vertebrates. We identified indicator species for all combinations of basin and flow class, perennial reaches combined from both basins, each basin, and some combinations of flow class and season within basins. Flow intermittency and orientation to perennial refuge predictors correlated well with both invertebrate and vertebrate communities. However, we did not find nestedness of communities that differed significantly from that expected by chance in response to increasing flow intermittency or distance to refuge. Lastly, basin, flow intermittency, and orientation to perennial refuge predictors were generally important for modeling taxon richness and densities, and richness and densities decreased with increasing flow intermittency and distance to perennial refuge. Collectively, our data suggest that intermittent streams harbor unique biodiversity, but also that some taxa have context-dependent responses to intermittency and orientation to perennial refuges. These findings also suggest that future increases in stream drying are likely to lead to changes to stream communities with high potential for the loss of aquatic biodiversity.<br><br><br><i>For inquiries regarding the contents of this dataset, please contact the Corresponding Author listed in the README.txt file. Administrative inquiries (e.g., removal requests, trouble downloading, etc.) can be directed to data-management@arizona.edu</i><br><i>This item is part of Data, R Code, and Supplemental Results for "Effects of drying and orientation to perennial refuges on aquatic biodiversity across two basins in California, USA". </i><i>See References, below, for the other parts.</i>
DOI: 10.25422/azu.data.16606754
title: Supplemental results for "Effects of drying and orientation to perennial refuges on aquatic biodiversity across two basins differing in aridity"

description: Intermittent streams are globally distributed, comprise over half the length of the global river network, and are expected to become more prevalent. However, most studies of intermittent streams are conducted at extremes of scale, are limited in taxonomic and temporal scope, and focus exclusively on drying patterns. Here, we assessed how both flow intermittency and orientation to perennial refuges affect aquatic invertebrates and aquatic and semi-aquatic vertebrates across two years within two intermittent river basins differing in their aridity. We used loggers to characterize flow intermittency and wet-dry mapping to determine orientation to perennial refuge of reaches. In winter and summer 2015 and 2016, we collected and identified invertebrates and visually surveyed vertebrates. Using permutational multivariate analyses of variance with distance matrices, we found distinct invertebrate communities by basin, flow class (perennial or intermittent), and season, and distinct vertebrate communities by basin, and between flow classes and seasons in the more arid basin. Invertebrate communities had higher beta diversity in the more arid than mesic basin, whereas the opposite was true for vertebrates. We identified indicator species for all combinations of basin and flow class, perennial reaches combined from both basins, each basin, and some combinations of flow class and season within basins. Flow intermittency and orientation to perennial refuge predictors correlated well with both invertebrate and vertebrate communities. However, we did not find nestedness of communities that differed significantly from that expected by chance in response to increasing flow intermittency or distance to refuge. Lastly, basin, flow intermittency, and orientation to perennial refuge predictors were generally important for modeling taxon richness and densities, and richness and densities decreased with increasing flow intermittency and distance to perennial refuge. Collectively, our data suggest that intermittent streams harbor unique biodiversity, but also that some taxa have context-dependent responses to intermittency and orientation to perennial refuges. These findings also suggest that future increases in stream drying are likely to lead to changes to stream communities with high potential for the loss of aquatic biodiversity.<br><br><br><i>For inquiries regarding the contents of this dataset, please contact the Corresponding Author listed in the README.txt file. Administrative inquiries (e.g., removal requests, trouble downloading, etc.) can be directed to data-management@arizona.edu</i><br><i>This item is part of Data, R Code, and Supplemental Results for "Effects of drying and orientation to perennial refuges on aquatic biodiversity across two basins in California, USA". </i><i>See References, below, for the other parts.</i>
DOI: 10.25422/azu.data.16606754.v1
title: Supplemental results for "Effects of drying and orientation to perennial refuges on aquatic biodiversity across two basins differing in aridity"

description: Intermittent streams are globally distributed, comprise over half the length of the global river network, and are expected to become more prevalent. However, most studies of intermittent streams are conducted at extremes of scale, are limited in taxonomic and temporal scope, and focus exclusively on drying patterns. Here, we assessed how both flow intermittency and orientation to perennial refuges affect aquatic invertebrates and aquatic and semi-aquatic vertebrates across two years within two intermittent river basins differing in their aridity. We used loggers to characterize flow intermittency and wet-dry mapping to determine orientation to perennial refuge of reaches. In winter and summer 2015 and 2016, we collected and identified invertebrates and visually surveyed vertebrates. Using permutational multivariate analyses of variance with distance matrices, we found distinct invertebrate communities by basin, flow class (perennial or intermittent), and season, and distinct vertebrate communities by basin, and between flow classes and seasons in the more arid basin. Invertebrate communities had higher beta diversity in the more arid than mesic basin, whereas the opposite was true for vertebrates. We identified indicator species for all combinations of basin and flow class, perennial reaches combined from both basins, each basin, and some combinations of flow class and season within basins. Flow intermittency and orientation to perennial refuge predictors correlated well with both invertebrate and vertebrate communities. However, we did not find nestedness of communities that differed significantly from that expected by chance in response to increasing flow intermittency or distance to refuge. Lastly, basin, flow intermittency, and orientation to perennial refuge predictors were generally important for modeling taxon richness and densities, and richness and densities decreased with increasing flow intermittency and distance to perennial refuge. Collectively, our data suggest that intermittent streams harbor unique biodiversity, but also that some taxa have context-dependent responses to intermittency and orientation to perennial refuges. These findings also suggest that future increases in stream drying are likely to lead to changes to stream communities with high potential for the loss of aquatic biodiversity.<br><br><br><i>For inquiries regarding the contents of this dataset, please contact the Corresponding Author listed in the README.txt file. Administrative inquiries (e.g., removal requests, trouble downloading, etc.) can be directed to data-management@arizona.edu</i><br><i>This item is part of Data, R Code, and Supplemental Results for "Effects of drying and orientation to perennial refuges on aquatic biodiversity across two basins in California, USA". </i><i>See References, below, for the other parts.</i>
DOI: 10.5281/zenodo.6326480
title: Explanation of peaks that were not reported by IDSL.IPA

description: The file provides an explanation of peaks that were not reported by the IDSL.IPA pipeline, however other tools did. The last column indicated that these peaks were probably part of an isotopic pattern for peaks that were already reported by IDSL.IPA.
DOI: 10.5281/zenodo.6326479
title: Explanation of peaks that were not reported by IDSL.IPA

description: The file provides an explanation of peaks that were not reported by the IDSL.IPA pipeline, however other tools did. The last column indicated that these peaks were probably part of an isotopic pattern for peaks that were already reported by IDSL.IPA.
DOI: 10.5281/zenodo.6326493
title: SHEBA CPI iamges

description: CPI images collected during the NCAR C-130 research flight on 7 May 1998 over the SHEBA campaign site (for details, please see Fridlind et al. 2012).
DOI: 10.6073/pasta/6e55031fc79fa3cc6305ff318522b775
title: Major ion and nutrient concentrations of water-soluble salts leached from aeolian material, McMurdo Dry Valleys, Antarctica (2013-2016)

description: To evaluate the role of Antarctic aeolian transport in surface chemistry homogenization, fifty-three samples of aeolian material from the McMurdo Dry Valleys region of Antarctica were collected and analyzed for water-soluble major ions and nutrients at a 1:5 sediment:water ratio. Samples were collected seasonally from Alatna Valley, Victoria Valley, Miers Valley, and Taylor Valley (Taylor Glacier, East Lake Bonney, F6 (Lake Fryxell), and Explorer’s Cove) at five heights (~5, 10, 20, 50, 100 cm) above the surface between 2013 and 2015. This data package is associated with Aeolian Material Transport and Its Role in Landscape Connectivity in the McMurdo Dry Valleys, Antarctica, published by Diaz et al. in 2018 (DOI: 10.1029/2017JF004589).
DOI: 10.6084/m9.figshare.19303913.v1
title: Games that can be used in psycholinguistics

description: Lists of games that can be used to have students apply knowledge of psycholinguistic models incorporating active learning in the teaching of psychology. Commercial board games and boardless games are included.
DOI: 10.6084/m9.figshare.19303913.v2
title: Teaching Psychlinguistics through Party Games (Materials)

description: Lists of games that can be used to have students apply knowledge of psycholinguistic models incorporating active learning in the teaching of psychology. Commercial board games and boardless games are included.
DOI: 10.6084/m9.figshare.19304072
title: taxonomy_v3.tsv

description: Taxonomy file for R data analysis
DOI: 10.6084/m9.figshare.19304072.v1
title: taxonomy_v3.tsv

description: Taxonomy file for R data analysis
DOI: 10.5281/zenodo.6326365
title: Data supporting figures of deforestation_carbon_biophysics

description: Data supporting figures in "Deforestation-induced climate change reduces carbon storage in remaining tropical forests"
DOI: 10.5281/zenodo.6326364
title: Data supporting figures of deforestation_carbon_biophysics

description: Data supporting figures in "Deforestation-induced climate change reduces carbon storage in remaining tropical forests"
DOI: 10.6084/m9.figshare.19304078
title: metadata

description: Metadata for R data analysis
DOI: 10.6084/m9.figshare.19304078.v1
title: metadata

description: Metadata for R data analysis
DOI: 10.6084/m9.figshare.19303913.v3
title: Teaching Psychlinguistics through Party Games (Materials)

description: Lists of games that can be used to have students apply knowledge of psycholinguistic models incorporating active learning in the teaching of psychology. Commercial board games and boardless games are included.
DOI: 10.5281/zenodo.6326369
title: Wikidata Subsets of 4 Gene Wiki Classes (wdsub)

description: Chemical compound (Q11173), disease (Q12136), gene (Q7187), and protein (Q8054) are some of the main classes containing the Gene Wiki WikiProjects. In this repository, we put the corresponding subsets of each class. The subsets contain all instances of the four main classes (no sub-classes). All subsets are extracted from the Wikidata JSON dump of 3 January 2022 (https://t.co/vdmJc8V1v2) using wdsub (https://github.com/weso/wdsub)
DOI: 10.5281/zenodo.6326368
title: Wikidata Subsets of 4 Gene Wiki Classes (wdsub)

description: Chemical compound (Q11173), disease (Q12136), gene (Q7187), and protein (Q8054) are some of the main classes containing the Gene Wiki WikiProjects. In this repository, we put the corresponding subsets of each class. The subsets contain all instances of the four main classes (no sub-classes). All subsets are extracted from the Wikidata JSON dump of 3 January 2022 (https://t.co/vdmJc8V1v2) using wdsub (https://github.com/weso/wdsub)
DOI: 10.6084/m9.figshare.19304090
title: Teaching Psycholinguistics with Party Games

description: Materias for article: Using Party Games to Help Students Understand Models of Psycholinguistics<br>Includes assignment given to students and lists of games that can be used to have students apply knowledge of psycholinguistic models incorporating active learning in the teaching of psychology. The lists are separated into commercial board games and boardless games.<br>
DOI: 10.6084/m9.figshare.19303913.v4
title: Teaching Psycholinguistics through Party Games (Materials)

description: Lists of games that can be used to have students apply knowledge of psycholinguistic models incorporating active learning in the teaching of psychology. Commercial board games and boardless games are included.
DOI: 10.5517/ccdc.csd.cc29lv4x
title: CCDC 2133269: Experimental Crystal Structure Determination

description: Related Article: Masahiro Hayakawa, Satoshi Horike, Yuh Hijikata, Kosuke Yasui, Shigehiro Yamaguchi, Aiko Fukazawa|2022|Chem.Commun.|58|2548|doi:10.1039/D1CC06996A
DOI: 10.17632/dw9swdmn3z.1
title: Petros Galanis_Fear of covid-19

description: Spss data
DOI: 10.5517/ccdc.csd.cc29w7k0
title: CCDC 2141342: Experimental Crystal Structure Determination

description: Related Article: Narito Ozawa, Kilingaru I. Shivakumar, Muthuchamy Murugavel, Yuya Inaba, Tomoki Yoneda, Yuki Ide, Jenny Pirillo, Yuh Hijikata, Yasuhide Inokuma|2022|Chem.Commun.|58|2971|doi:10.1039/D2CC00361A
DOI: 10.5517/ccdc.csd.cc29w7l1
title: CCDC 2141343: Experimental Crystal Structure Determination

description: Related Article: Narito Ozawa, Kilingaru I. Shivakumar, Muthuchamy Murugavel, Yuya Inaba, Tomoki Yoneda, Yuki Ide, Jenny Pirillo, Yuh Hijikata, Yasuhide Inokuma|2022|Chem.Commun.|58|2971|doi:10.1039/D2CC00361A
DOI: 10.5517/ccdc.csd.cc29w7m2
title: CCDC 2141344: Experimental Crystal Structure Determination

description: Related Article: Narito Ozawa, Kilingaru I. Shivakumar, Muthuchamy Murugavel, Yuya Inaba, Tomoki Yoneda, Yuki Ide, Jenny Pirillo, Yuh Hijikata, Yasuhide Inokuma|2022|Chem.Commun.|58|2971|doi:10.1039/D2CC00361A
DOI: 10.6084/m9.figshare.19303913
title: Empty - mistake

description: Lists of games that can be used to have students apply knowledge of psycholinguistic models incorporating active learning in the teaching of psychology. Commercial board games and boardless games are included.
DOI: 10.6084/m9.figshare.19303913.v6
title: Empty - mistake

description: Lists of games that can be used to have students apply knowledge of psycholinguistic models incorporating active learning in the teaching of psychology. Commercial board games and boardless games are included.
DOI: 10.6084/m9.figshare.19303913.v5
title: Teaching Psycholinguistics through Party Games (Materials)

description: Lists of games that can be used to have students apply knowledge of psycholinguistic models incorporating active learning in the teaching of psychology. Commercial board games and boardless games are included.
DOI: 10.5281/zenodo.6325397
title: Dataset for "Oxidase-type C-H/C-H coupling using an isoquinoline-derived organic photocatalyst"

description: We have uploaded the corresponding raw and processed data for each figure from main text and supporting information. We also uploaded the raw data of NMR and HR-MS for characterization of the organic products.
DOI: 10.5281/zenodo.5176028
title: Dataset for "Oxidase-type C-H/C-H coupling using an isoquinoline-derived organic photocatalyst"

description: We have uploaded the corresponding raw and processed data for each figure from main text and supporting information. We also uploaded the raw data of NMR and HR-MS for characterization of the organic products.
DOI: 10.5281/zenodo.6326515
title: Words are monuments data-only archive

description: These are the data that go with the paper "Words are monuments: Patterns in US national park place names perpetuate settler colonial mythologies including white supremacy" (available 6 April 2022) by the above authors. Our code (and these data) are available at https://doi.org/10.5281/zenodo.5712009. This archive is here for folks who just want the data. This is the <strong>full dataset with name explanations</strong> and references for the explanations, traditional Indigenous place names for settler colonial place names (where available), additional categories for sorting, and more. Note: .csv files can be opened in Excel and Google Sheets. column info: A: Unique ID per row B: National Park place name is in C: Place name according to NPS visitor map D: Feature type (mountain, island, picnic area, etc.) E: Name type (person, non-human animal, plant, etc.) F: Natural or human constructed (human constructed includes so-called "ruins", as well as visitor centers, etc.) G: Is the word from an Indigenous or western language? H: Is it a traditional Indigenous place name? I: If it is Indigenous is it the name of an Indigenous person or people? J: Is it a translation of a traditional Indigenous PN? K: Word meaning class (similar to column E) L: Erasure -- see paper for definitions of each class below and decision trees Yes potentially no information not erasure - evidence it is a traditional Indigenous PN or settler built with western PN translation of traditional IPN) M: Dimensions of racism and colonialism -- see paper for definitions of each class below and decision trees No (traditional Indigenous PN, western built with western PN, or erasure as only problem) Name itself promotes racist ideas and/or violence against a group Named after person who supported racist ideas (but not physically violent) Named for a person who directly or use their power to indirectly perpetrate violence against a racial group Western use of Indigenous name (Appropriation) Other - truly does not fit any other classes No info - cannot find explanation Colonialism - memorializes colonialism Relevant western use of Indigenous name (i.e., appropriation of traditional name) N: Derogatory Yes Potentially No info O: explanation of name found in research P: Link to resources explaining name (for full citation for books cited, e.g., "name year" entries, see Table S1 in the paper). Q: Link to resources explaining name (if second link or source available) R: Indigenous name found in research v1.0.0 did not include columns O-R by mistake; corrected in this version update.
description: This work was funded by David H. Smith Conservation Research Fellowships to authors BM, SB, GW, KI, and JBUK.