cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.72summ
title: Occurrence Download

description: A dataset containing 2476 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Crypturellus bartletti (P.L.Sclater & Salvin, 1873))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2476 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294768-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4t2sr
title: Occurrence Download

description: A dataset containing 2068 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus saxatilis F.Cuvier, 1823"
 ]
}

 The dataset includes 2068 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294769-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqj3hm
title: Occurrence Download

description: A dataset containing 446 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Montipora turgescens Bernard, 1897"
 ]
}

 The dataset includes 446 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136000-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ysthwg
title: Occurrence Download

description: A dataset containing 408 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Eudromia formosa (Lillo, 1905), Eudonia formosa Butler, 1881, Euchromia formosa Boisduval, 1833)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 408 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294785-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ktxy3s
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus dabeshanensis W.C.Cheng & Y.W.Law"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136001-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tdr74q
title: Occurrence Download

description: A dataset containing 447289 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sericornis frontalis (Vigors & Horsfield, 1827))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 447289 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294803-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cm7ynb
title: Occurrence Download

description: A dataset containing 25605 species occurrences available in GBIF matching the query:
{
 "and" : [
 "MediaType is Image",
 "TaxonKey is Eupeodes Osten-Sacken, 1877"
 ]
}

 The dataset includes 25605 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159451-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.22j9rz
title: Occurrence Download

description: A dataset containing 842369 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Calidris pusilla (Linnaeus, 1766))",
 "HasCoordinate is one of (true)"
 ]
}

 The dataset includes 842369 records from 173 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294811-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x5rtsj
title: Occurrence Download

description: A dataset containing 160 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "TaxonKey is one of (Nothoscordum andicola Kunth, Zephyranthes tubiflora (L'Hér.) Schinz)"
 ]
}

 The dataset includes 160 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006453-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3s66e8
title: Occurrence Download

description: A dataset containing 268 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-6.57079 39.91048,-3.69690 39.91048,-3.69690 41.05953,-6.57079 41.05953,-6.57079 39.91048))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Eryngium tenue Lam."
 ]
}

 The dataset includes 268 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159456-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bw37b4
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liparis petricola (D.L.Jones & B.Gray) Bostock"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011312-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pfexeq
title: Occurrence Download

description: A dataset containing 500999 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saxicola rubetra (Linnaeus, 1758)",
 "CoordinateUncertaintyInMeters is less than 10000",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 500999 records from 577 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0159433-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdxnsf
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liparis platychila Schltr."
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011321-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9mm4g5
title: Occurrence Download

description: A dataset containing 5858 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sauromalus ater Duméril, 1856"
 ]
}

 The dataset includes 5858 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0160591-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8q4b22
title: Occurrence Download

description: A dataset containing 7112 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Origma solitaria (Lewin, 1808))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7112 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294793-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m6k6qs
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Megupsilon aporus Miller & Walters, 1972"
 ]
}

 The dataset includes 12 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0160623-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbqsnh
title: Occurrence Download

description: A dataset containing 7012 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Eudromia elegans I.Geoffroy Saint-Hilaire, 1832)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7012 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294783-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w6zk7r
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psenulus laevigatus (Schenck, 1857)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0225244-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.umteq4
title: Occurrence Download

description: A dataset containing 1194 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Nothocrax urumutum (Spix, 1825))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1194 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294830-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6sjc5
title: Occurrence Download

description: A dataset containing 28969 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Calidris ptilocnemis (Coues, 1873))",
 "HasCoordinate is one of (true)"
 ]
}

 The dataset includes 28969 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294794-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/7xcgbfkbz5.1
title: Data with DNA damaged-induced phosphorylation of a replicative DNA helicase results in inhibition of DNA replication through attenuation of helicase function - NAR 2024

description: SV40 DNA replication inhibition is associated with enhanced DDR kinase phosphorylation of SV40 Large T-antigen (LT), the viral DNA helicase. In this study mass spectroscopy was used to identify a novel highly conserved DDR kinase site, T518, on LT. In cell-based assays expression of a phosphomimetic form of LT at T518 (T518D) resulted in dramatically decreased levels of SV40 DNA replication, but LT-dependent transcriptional activation was unaffected. In concordance with the cell-based data, reactions using purified WT and LT-T518D, but not T518A, showed dramatic inhibition of SV40 DNA replication in vitro as well. 
The MS data includes all peptides identified as excel files from the UB Mass Spec Facility. The data is sorted by XCorr, which is the search engine score from Sequest HT, the higher XCorr the more confident the identification. The MS2 fragmentation of the phosphorylated and nonphosphorylated T518Q containing peptide is included in sheet 2 of the excel document. Results are also reported from MS facility as a .doc report. Raw data used to create the final figures in the paper in a pptx format is the final inclusion.

Following are brief explanations of all columns in the table of the MS data (peptide list) : 
Sequence - the peptide sequence identified 
# PSMs - how many times a spectrum has been matched to this peptide sequence ( a crude quantitative value) 
# Proteins - how many protein(s) this peptide can be inferred to 
# Protein groups - similar with above but several proteins can be grouped to one protein group if no unique peptides can be identified to discriminated one from the other 
Protein group accessions - Uniprot (or other protein database) accession number 
Modifications - PTMs identified on the peptide 
deltaCn - the difference of XCorr (search engine score) between the best match and the second best match (which is a match to another peptide, usually only the best match is considered as the "correct" match) 
phosphoRS site probabilities - Predicted probabilities of PTM localization 
XCorr - search engine score from Sequest HT, the higher XCorr the more confident the identification 
Charge, MH+, RT - basic probabilities of the peptide ion 
deltaM - mass difference between the theoretical and detected peptide ion 
# Missed cleavages - how many K/Rs left in the peptide sequence, which should be cleaved by trypsin but are not.
DOI: 10.17632/nm8k3rxwy2.1
title: LINF_020008200

description: RRP41B
Leishmania infantum (strain JPCM5)
DOI: 10.17632/ktgkjb3btb.1
title: LINF_020008700

description: proteasome regulatory non-ATPase subunit 6
Leishmania infantum (strain JPCM5)
DOI: 10.17632/45hrz42s9r.1
title: LINF_310008400

description: CRAL/TRIO domain containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/grwkzzcd5n.1
title: LINF_020008900

description: ubiquitin-conjugating enzyme E2 | UBC9
Leishmania infantum (strain JPCM5)
DOI: 10.17632/dnjd6h83bc.1
title: LINF_020008800

description: Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/nwtms3s4pj.1
title: LINF_300039700

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/m8jvzmw82r.1
title: LINF_300039000

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/jd6823d8pv.1
title: Indoxacarb, cyantraniliprole, and the earwig Euborellia annulipes as options for integrated control of diamondback moth

description: Data that support the findings of this study.
DOI: 10.17632/hs9bv4vnsc.1
title: In vitro detection of cancer-associated-MSC-primed quiescent and slow cycling cells in leukaemia patient-derived co-cultures.

description: Raw data files
DOI: 10.17632/csncnv8wnd.1
title: Driving data by an internet taxi (Snapp) using Irankhodro Runna car

description: Driving data by an internet taxi (Snapp) using Irankhodro Runna car including the data of 5739.1 km in Tehran, Iran, in the summer of 2023
DOI: 10.17632/hh82vmg6t6.1
title: Part 3 of data for for Elizondo et al Adipose Tissue Macrophage Transglutaminase 2 and the Inflammation of Diet-Induced Obese Male Mice”

description: Part 3 of Data for Elizondo et al Adipose Tissue Macrophage Transglutaminase 2 and the Inflammation of Diet-Induced Obese Male Mice” - more RNAseq raw data
DOI: 10.17632/9j622zfd4s.1
title: Experimental dataset for cross-laminated timber-concrete composite floor systems

description: Dataset #1 contains slips measurements small-scale tests. Dataset #2 contains deflections, interface slips and edge warping measured for half-scale tests. Dataset #3 contains deflections, interface slips and edge warping measured for full-scale tests.
DOI: 10.17632/9j622zfd4s.2
title: Experimental dataset for cross-laminated timber-concrete composite floor systems

description: Dataset #1 contains slips measurements small-scale tests. Dataset #2 contains deflections, interface slips and edge warping measured for half-scale tests. Dataset #3 contains deflections, interface slips and edge warping measured for full-scale tests.
DOI: 10.15468/dl.4spj3g
title: Occurrence Download

description: A dataset listing the 4 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Geometry MULTIPOLYGON Z(((-81.45611 46.3816 0,-81.45626 46.38094 0,-81.45615 46.38011 0,-81.45602 46.37958 0,-81.45569 46.37924 0,-81.4552 46.37919 0,-81.45473 46.37961 0,-81.45389 46.3799 0,-81.45255 46.37979 0,-81.45096 46.37975 0,-81.45047 46.37968 0,-81.45035 46.37985 0,-81.4502 46.38009 0,-81.45006 46.38031 0,-81.44996 46.38073 0,-81.44989 46.38091 0,-81.44984 46.38116 0,-81.44979 46.38139 0,-81.44967 46.38165 0,-81.44932 46.38162 0,-81.44876 46.38138 0,-81.44864 46.38144 0,-81.44859 46.38168 0,-81.44855 46.38202 0,-81.44908 46.38206 0,-81.4498 46.38206 0,-81.45019 46.38292 0,-81.45006 46.38347 0,-81.45035 46.38365 0,-81.45097 46.38421 0,-81.45202 46.38387 0,-81.45229 46.38262 0,-81.45383 46.38269 0,-81.45452 46.38261 0,-81.45573 46.3821 0,-81.45611 46.3816 0)))",
 "Geometry MULTIPOLYGON Z(((-81.45752 46.37733 0,-81.45717 46.37755 0,-81.45683 46.37792 0,-81.45657 46.37818 0,-81.45667 46.37852 0,-81.45714 46.37885 0,-81.45791 46.37884 0,-81.45841 46.37848 0,-81.45832 46.37809 0,-81.45761 46.37806 0,-81.45754 46.37787 0,-81.45754 46.37786 0,-81.45767 46.37776 0,-81.45793 46.37774 0,-81.4582 46.37769 0,-81.45823 46.37749 0,-81.45804 46.37718 0,-81.45783 46.37712 0,-81.45768 46.37719 0,-81.45752 46.37733 0)))"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC0 1.0, CC-BY 4.0)",
 "OccurrenceStatus is Present",
 "Year 2014-2025"
 ]
}

 The dataset's 4 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004424-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/rr9x7658hh.3
title: D & V Hipp. BrdU+ Cells by Age_Data Assoc. w. PMID37146791

description: Electroconvulsive seizure, vs. sham procedure, was administered once daily for 10 consecutive days to paired male WT and Egr3-/- mice. Brain tissue was collected and cellular proliferation in the hippocampal formation was analyzed via bromodeoxyuridine (BrdU) immunohistochemistry. Analyses investigated whether number of BrdU+ cell counts were associated with animal age. Complete methods are found in associated Data in Brief article (submitted) and original associated article: Meyers, K.T., et al., Serial electroconvulsive Seizure alters dendritic complexity and promotes cellular proliferation in the mouse dentate gyrus; a role for Egr3. Brain Stimul, 2023. 16(3): p. 889-900. https://doi.org/10.1016/j.brs.2023.04.022
PMID: 37146791
DOI: 10.17632/n9hrg8hj2t.2
title: Part 1 of data for Elizondo et al Adipose Tissue Macrophage Transglutaminase 2 and the Inflammation of Diet-Induced Obese Male Mice

description: Part 1 of underlying data for manuscript Elizondo DM, Patel TP, Iben JR, Roberson RB, Hollis MC, Chen J, Yanovski JA. Adipose Tissue Macrophage Transglutaminase 2 and the inflammation of Diet-Induced Obese Mice
DOI: 10.15468/dl.rh7d2t
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-15.64178 33.23070,46.27568 33.23070,46.27568 58.01173,-15.64178 58.01173,-15.64178 33.23070))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pochazia shantungensis (Chou & Lu, 1977)"
 ]
}

 The dataset includes 88 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018060-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/n6kwbftr6h.2
title: Transitions and multistability in macroevolutionary dynamics of large mammals

description: v.2 includes additional datasets that were used to characterise the sample and quality of the fossil record shown in Appendix A.
Please read the README.txt file for description of the data and code. Source files can be provided upon request at this point.
NOW database used in this work was published by the NOW Community, 2022. New and Old Worlds Database of Fossil Mammals (NOW). Licensed under CC BY 4.0. Retrieved 2022-04-27 from https://nowdatabase.org/now/database/. 
CENOGRID climate time series used in this work and provided here for ease of replication were published in Westerhold et al., 2022, https://doi.org/10.1126/science.aba6853. We downsample the time series to match the resolution of mammalian diversity time series and provide this data in CENOGRID_interp.csv file.
PanTheria database (Jones et al., 2009, https://doi.org/10.1890/08-1494.1) is also provided here for ease of replication.
DOI: 10.17632/wrj6f33ncb.1
title: Raw X-ray Diffraction and Magnetization Data for (Sm,Zr)(Fe,Co,Ti)12 Alloy Particles Synthesized via Reduction-Diffusion

description: These data, after the appropriate processing such as a correction for the self-demagnetization, were used in the research article "Structural evolution and magnetic hardness of (Sm,Zr)(Fe,Co,Ti)12 alloy particles via reduction-diffusion" by Chaoya Han, A.M. Gabay, Christopher Chan, L.H. Lewis, G.C. Hadjipanayis and Chaoying Ni submitted to the Journal of Alloys and Compounds. The name of each datafile contains a reference to the specific alloy batch, described in the article, and a duration of the reduction annealing.