cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3259407
title: Kraken database (2019-01-26)

description: Kraken database containing genomes from bacteria, archaea, viruses and the human reference genome as of 2019-01-26. A the domain level the database composition is: Bacteria (85.13%, 358273085 bp) Eukaryota (11.29%, 47508472 bp) Archaea (2.56%, 10774261 bp) Viruses (0.98%, 4115713 bp) Viroids (0.00%, 277 bp)
DOI: 10.5281/zenodo.3402815
title: FeRh on I16 2019 September

description: Datasets collected during beamtime MM21966-1 (I16)
DOI: 10.5281/zenodo.3402816
title: FeRh on I16 2019 September

description: Datasets collected during beamtime MM21966-1 (I16)
DOI: 10.5255/ukda-sn-853918
title: Improving the use of evidence from climate models 2008-2013
DOI: 10.5281/zenodo.3385072
title: Bridge Inspecting with Unmanned Aerial Vehicles R&D

description: Corresponding data set for Tran-SET Project No. 17STLSU11. Abstract of the final report is stated below for reference: "The project achieves through research including literature, on site interviews, and experimentation: 1) a recommendation for a UAV-based system to practically assist in routine bridge inspection work in the State of Louisiana, 2) the identification and description of advantages, disadvantages, and limitations in the use of UAVs for routing bridge inspection work in Louisiana, and 3) provided recommendations for future work. The Yuneec H520 aircraft and its E90 camera are recommended, as is the need for a boat to be included as part of the system. The recommended system has advantages in reaching portions of the bridge that are difficult to reach by human inspectors and includes sufficient image resolution to assist the bridge inspection process. A disadvantage though, is that of the overburden of regulations both from the FAA and for getting permission to inspect a bridge using a UAV. These regulations my render negligible, any gains in efficiency perceived in the use of UAVs for bridge inspection. Also, the UAV is described by the project as an assistance tool for the manual bridge inspection process and cannot replace the needed work of bridge inspectors, as it has limitations. For example, the UAV cannot perform inspections beneath the bridge deck since it may lose its GPS navigation reference. Likewise, it cannot see beneath the surface to tell of concrete components have subsurface cracks or timbers might be hollow. These tests are still the domain of manual bridge inspection. The project provided recommendations with respect to changes in how inspections should be done using the UAV, i.e. in the pre-inspection phase, needed field studies using the UAV, needed economics alternative-tradeoffs studies, and recommendations for augmenting the aircraft and its instruments. The Second phase, i.e. the Implementation Phase, will utilize the information and educational fruits of the technical research phase for tutorials, seminars and to facilitate feedback surveys with engineering firms, the LADOTD, engineering societies, and students."
description: Tran-SET Project No. 17STLSU11
DOI: 10.5281/zenodo.3403285
title: Impacts of Freight Consolidation and Truck Sharing on Freight Mobility

description: Corresponding data set for Tran-SET Project No. 17ITSOKS02. Abstract of the final report is stated below for reference: "The trucking industry is an important sector of the U.S. economy. However, it is quite fragmented, hindering the efficiency of cargo transportation and the ability for small carriers to identify demands to fill full truck loads. The focus of this research is to study models and algorithms in order to aid online freight marketplaces to identify efficient consolidation strategies. To accomplish this aim, a new mixed integer programming model for the pickup and delivery problem has been developed. The model is geared towards identifying effective freight consolidation opportunities. A branch-and-cut algorithm to solve the model was also developed. The model was applied to several case studies using Transplace, Inc. (a third party logistics company) route data to identify optimized, consolidated routes. Emission impacts were also estimated for both the existing and consolidated routes using monetary equivalent cost (MEC) values. A linear regression model was developed to predict freight movement between metropolitan statistical areas (MSAs). Results of the case studies were then applied to estimate the operation and environment-related costs associated with freight movement from New Orleans MSA to Oklahoma City MSA for all commodities. Finally, the results of the case studies were applied at the national level and projected for future years, to estimate the potential cost savings in freight consolidation. Results indicate that it may be possible to consolidate cargo with only 67% of the currently used number of trucks, which may reduce the operation cost by 23% and MEC by 17%."
description: Tran-SET Project No. 17ITSOKS02
DOI: 10.5281/zenodo.3403290
title: Modeling Sulfate Attack in Modern Concrete for Building Sustainable and Resilient Infrastructure

description: Corresponding data set for Tran-SET Project No. 17CTAM01. Abstract of the final report is stated below for reference: "External sulfate attack is a complex phenomenon and is manifested in the form of large expansion, cracking, and spalling depending on the exposure solution and material constituent properties. Several models were developed in the past to demonstrate sulfate attack mechanisms that account for the diffusion of sulfate ions into the porous concrete and the successive deformation triggered by the chemical reaction and precipitation of expansive agents. However, none of these models accounts for the effect of the migration of solvent water from the low solute concentration solution to high solute concentration solution driven by the osmotic pressure. Osmotic pressure is believed to cause spalling and cracking of concrete substrates coated with semipermeable membrane that prohibits diffusion of ions from the surroundings into the porous body. In order to determine the effect of osmotic pressure on the deformation of concrete exposed to sulfate solution, a coupled poromechanical model has been developed. Sensitivity analysis has been performed to investigate the effect of material constituent properties and exposure solution on the osmotic pressure induced damage propensity of concrete. It has been found that concrete surface can exhibit high instantaneous tensile stress developed by the gradient in the salt concentration between the pore solution and external surroundings."
description: Tran-SET Project No. 17CTAM01
DOI: 10.5519/qd.4on653c2
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (131 records)
DOI: 10.5281/zenodo.3402837
title: On-farm demonstration datasets in excel

description: These files comprise 'Part A' of the questionnaire utilised to populate the inventory of on-farm demonstrations across Europe. The 'farms' file comprises the farmers who responded to the survey; the 'organisations' file the agricultural industry organisations which host or organise demonstrations (e.g. research institutions, agricultural advisory services, farming organisations). Part A identifies the topics and audiences of the demonstrations, as well as whether they are located. A search of the databases can also be conducted from the FarmDemo platform: https://farmdemo.eu/hub/
DOI: 10.5281/zenodo.3402838
title: On-farm demonstration datasets in excel

description: These files comprise 'Part A' of the questionnaire utilised to populate the inventory of on-farm demonstrations across Europe. The 'farms' file comprises the farmers who responded to the survey; the 'organisations' file the agricultural industry organisations which host or organise demonstrations (e.g. research institutions, agricultural advisory services, farming organisations). Part A identifies the topics and audiences of the demonstrations, as well as whether they are located. A search of the databases can also be conducted from the FarmDemo platform: https://farmdemo.eu/hub/
DOI: 10.7910/dvn/ojktd7/atzo3x
title: BhalotraClarke_TheTwinInstrument_onlineAppendix_JEEA.tex

description: :unav
DOI: 10.7910/dvn/ojktd7/cszglg
title: results.7z

description: :unav
DOI: 10.7910/dvn/ojktd7/exfv0k
title: dataSources.pdf

description: :unav
DOI: 10.7910/dvn/ojktd7/f1nnas
title: data.7z

description: :unav
DOI: 10.7910/dvn/ojktd7/fngehx
title: BhalotraClarke_TheTwinInstrument_JEEA.pdf

description: :unav
DOI: 10.7910/dvn/ojktd7/frcqqs
title: log.7z

description: :unav
DOI: 10.7910/dvn/ojktd7/uypcnq
title: source.7z

description: :unav
DOI: 10.7910/dvn/ojktd7/yxkopi
title: README.txt

description: :unav
DOI: 10.7910/dvn/ojktd7/zk83or
title: README.txt.pdf

description: :unav
DOI: 10.7910/dvn/ojktd7/lufbzg
title: BhalotraClarke_TheTwinInstrument_JEEA.tex

description: :unav
DOI: 10.7910/dvn/ojktd7/mz9wbh
title: BhalotraClarke_TheTwinInstrument_onlineAppendix_JEEA.pdf

description: :unav
DOI: 10.21227/rgh2-wg43
title: Electric Vehicle speed, pedal, accel, voltage and current data over four different roads

description: The four files in this dataset each contain vectors Time, PEDAL, SPEED, ACCEL, VOLTAGE and CURRENT related to an Electric Vehicle travelling on one of four different roads, mostly in urban areas. Data is obtained from the CAN bus of the vehicle (a Zhidou ZD model ZD2) and stored in the dataset vectors at the original sampling rate.
DOI: 10.21227/4v6q-gr58
title: Electric Vehicle speed, pedal, accel, voltage and current data over four different roads

description: The four files in this dataset each contain vectors Time, PEDAL, SPEED, ACCEL, VOLTAGE and CURRENT related to an Electric Vehicle travelling on one of four different roads, mostly in urban areas. Data is obtained from the CAN bus of the vehicle (a Zhidou ZD model ZD2) and stored in the dataset vectors at the original sampling rate.
DOI: 10.25345/c5xq04
title: MassIVE MSV000084306 - RIMONSALVE DATA FOR VELUTINA PROTEINS CHARACTERIZED
title: RI MONSALVE DATA FOR VELUTINA PROTEINS CHARACTERIZED (VV1, AG5)
DOI: 10.5281/zenodo.3402976
title: Raw data for "Coupled ptychography and tomography algorithm improves reconstruction of experimental data"

description: Raw data used in "<em>Coupled ptychography and tomography algorithm improves reconstruction of experimental data</em>" by M. Kahnt, J. Becher, D. Brückner, Y. Fam, T. Sheppard, T. Weissenberger, F. Wittwer, J.-D. Grunwaldt, W. Schwieger and C.G. Schroer
DOI: 10.5281/zenodo.3402977
title: Raw data for "Coupled ptychography and tomography algorithm improves reconstruction of experimental data"

description: Raw data used in "<em>Coupled ptychography and tomography algorithm improves reconstruction of experimental data</em>" by M. Kahnt, J. Becher, D. Brückner, Y. Fam, T. Sheppard, T. Weissenberger, F. Wittwer, J.-D. Grunwaldt, W. Schwieger and C.G. Schroer
DOI: 10.5519/qd.nnh2zeo7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.15468/1l6iup
title: The vertebrate Fauna of the Judith River formation, Montana

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sahni, Ashok (1972): The vertebrate Fauna of the Judith River formation, Montana. Bulletin of the American Museum of Natural History 147 (6): 319-416, DOI: 10.5281/zenodo.3382461, Hdl: http://hdl.handle.net/2246/1099
DOI: 10.21227/hyeh-g394
title: Electric Vehicle speed, pedal, accel, voltage and current data over four different roads

description: The files in this dataset each contain vectors Time, PEDAL, SPEED, ACCEL, VOLTAGE and CURRENT related to an Electric Vehicle travelling on one of four different roads, mostly in urban areas. Data is obtained from the CAN bus of the vehicle (a Zhidou ZD model ZD2) resampled in order to obtain a single time coordinate and stored in the dataset.
DOI: 10.17632/gncknw3g7h.6
title: Data for: Ethnomedicine of Tetun ethnic people in West Timor Indonesia; Philosophy and practice in the treatment of malaria

description: Supplementary data PLANTS USED FOR THE TREATMENT OF MALARIA BY TETUN ETHNIC PEOPLE IN WEST TIMOR (INDONESIA) Note: 1. Data collected in April 20017 to December 2017 in Belu and Malaka Districts (West Timor, Indonesia). 2. Data collected by interview on 94 informants of Tetun ethnic people.
DOI: 10.5281/zenodo.3370934
title: Image datasets for jammer classification in GNSS

description: Set of spectrogram binary images corresponding to GNSS signal with and without interference in a variety of scenarios and signal parameters. It also includes two Matlab functions to perform the analisys.
DOI: 10.5445/ir/1000098024
title: Parking events derived from trip data from MiD2008

description: The data set covers mobility diaries in 6.465 German car users for one week. This data set is based on the work of [1]. The car users noted their mobility behavior in for a whole week. The participants started logging their mobility patterns on different days. In the end, the data was aggregated starting on a Monday. The time of data collection was selected so that there were no holidays in the data. This data for different driver types are found in the CSV-files named "DrivingProfiles_*.CSV" During the week the participants noted where they went, \eg work, shopping, home, the mode of transportation and the distance traveled. This resulted in mobility diaries in 15 minutes resolution. Each column represents a 15-minute slot. One driver is resembled by to lines. First, her location, second, her distance traveled by car in the 15-minute slot. From this data, we derived parking events with different features found in ParkingEventsData.csv [1] Zumkeller, D., Chlond, B., Ottmann, P., Kagerbauer, M., & Kuhnimhof, T. (2011). Deutsches Mobilitätspanel (MOP)–wissenschaftliche Begleitung und erste Auswertungen. Kurzbericht. Karlsruhe: Institut für Verkehrswesen, Universität Karlsruhe. The original data set can be acquired via https://daten.clearingstelle-verkehr.de/192/
DOI: 10.5281/zenodo.3402789
title: Fast and sensitive flow-injection mass spectrometry metabolomics by analyzing sample specific ion distributions

description: Data generated and analyzed in "Fast and sensitive flow-injection mass spectrometry metabolomics by analyzing sample specific ion distributions" Boris Sarvin<sup>‡1</sup>, Shoval Lagziel<sup>‡2</sup>, Nikita Sarvin<sup>1</sup>, Dzmitry Mukha<sup>1</sup>, Praveen Kumar<sup>1</sup>, Elina Aizenshtein<sup>3</sup>, Tomer Shlomi *<sup>123</sup> <sup>1</sup> Faculty of Biology, Technion – Israel Institute of Technology, 32000 Haifa, Israel. <sup>2</sup> Faculty of Computer Science, Technion – Israel Institute of Technology, 32000 Haifa, Israel. <sup>3</sup> Lokey Center for Life Science and Engineering, Technion – Israel Institute of Technology, 32000 Haifa, Israel. <sup>‡</sup> BS and SL contributed equally to this work.
DOI: 10.5281/zenodo.3402790
title: Fast and sensitive flow-injection mass spectrometry metabolomics by analysing sample specific ion distributions

description: <strong>The mass spectrometry data generated as part of the work on the manuscript entitled "</strong><strong>Fast and sensitive flow-injection mass spectrometry metabolomics by analysing sample specific ion distributions". </strong>
DOI: 10.5285/37cafd85-e84f-416c-8c09-51a5ec9b001c
title: A bathymetric compilation of the South Shetland Islands, 1991-2017

description: We present a new bathymetric compilation of the South Shetland Islands here defined by the following bounding box: 63 to 53.3 W, 63.5 to 60.5 S. This bathymetry grid was compiled from a variety of multibeam swath bathymetry data acquired during 76 different cruises (see lineage). The data is available as a grid of approximately 100 m resolution in two different formats: a GMT-compatible (2-D) NetCDF and Arc/Info and ArcView ASCII grid format using geographic coordinates on the WGS84 datum.
description: The bathymetry map was compiled from a variety of different data sources. The primary data are multibeam swath bathymetry collected from scientific cruises undertaken by British Antarctic Survey (BAS), or acquired during RV Nathaniel B. Palmer, RV Surveyor, RV Maurice Ewing and RRS James Cook expeditions. The complete list of the cruises used for the compilation is described below: James Clark Ross expeditions: JR59, JR69-67, JR71, JR81, JR84, JR93, JR112, JR115, JR149, JR150, JR158, JR179, JR185, JR188, JR193-196, JR194-197, JR228, JR230, JR233, JR239-235-236, JR240, JR244, JR252-254c, JR254D-264-265, JR255A, JR276, JR279-286, JR281, JR299, JR306-307, JR312, JR15003, JR16002, JR16003, JR17003, JR17003A Ewing cruise: EW9101 James Cook cruises: JC055, JC054 NB Palmer cruises: NBP9507, NBP9902, NBP9903, NBP9904, NBP9905, NBP0001, NBP0002, NBP0003, NBP0106, NBP0107, NBP0201, NBP0202, NBP0502, NBP0602A, NBP0603, NBP0606, NBP0703, NBP0710, NBP0805, NBP0908, NBP1001, NBP1003, NBP1103, NBP1105, NBP1107, NBP1203, NBP1304, NBP1602, NBP1603, NBP1608 Surveyor cruises: AMLR95, RITS93A, RITS94B, AMLR90, AMLR92, AMLR94 The grid was created using the mbgrid program from MB-system version 5.5.2336 , using the parameters " -E0.001/0.001/degrees! -G4 -A2 -F1 -R-63/-53.3/-63.50/-60.5" for Arc/Info and ArcView ASCII grid and " -E0.001/0.001/degrees! -G3 -A2 -F1 -R-63/-53.3/-63.50/-60.5" for the netCDF file. This uses a Gaussian weighted mean filter and the bathymetry is gridded as topography (positive upwards)
description: The grid contains both raw and processed data.
DOI: 10.17632/3jtgk4zvtg.1
title: Prevalence of helicobacter pylori infection among Egyptian children with nephrotic syndrome: a single center study.

description: Objectives: Increasing attention has been paid for the role of helicobacter pylori (H.pylori) infection in nephrotic syndrome (NS) pathogenesis. We investigated the frequency, possible role and risk factors of H. pylori among NS children. Methods: We conducted a cross-sectional comparative study in Mansoura, Egypt from January 2017 to January 2019. We enrolled 100 children with NS (NS group) and 100 healthy controls. All patients were assessed for gastritis symptoms, response to steroid therapy, dose and duration of steroid therapy. H. pylori infection was investigated using H.pylori stool antigen (HpSA) test. Renal biopsy results were retrieved. Chi-square, Fisher exact and Mann-Whitney tests were used for statistical analysis. Results: With regard to HpSA test results, neither statistically significant difference was found between NS and control groups (P =0.193) nor between steroid sensitive and steroid resistant NS subgroups (P =0.286). Mesangioproliferative glomerulonephritis and minimal change disease (MCD) were the most common biopsy findings in NS group. Minimal change disease (MCD) was the most frequent biopsy finding in H.pylori positive patients (9 patients, 45%) with statistically significant difference in comparison to H.pylori negative patients (P =0.013). High dose steroid was associated with an increased risk of H.pylori infection among NS children (Odds ratio [OR] = 3.8; 95% confidence interval [CI] = 1.3-11.3). Conclusions: H.pylori may contribute in MCD pathogenesis. High dose steroid is associated with an increased risk for H.pylori among NS children.
DOI: 10.17632/wwxf49yvvx.3
title: data_rapeseed

description: Purple rapeseed leaves dataset contains training set and test set, both of which included RGB images which were cropped using UAV orthoimage and the corresponding labels, with the size of 256 × 256 pixels. The codes for the U-Net model used in this experiment was also assigned to the folder.
DOI: 10.21227/a4qg-5390
title: Charge and Discharge cycle pattern

description: This paper looks at six different applications for a domestically located battery system and determines how these could be translated into different electrical power application “drive” cycles. The applications considered are as follows: 1) a house with four people and a solar panel using the battery to absorb extra energy when the PV panel is producing more power than is absorbed in the house and then releasing this energy afterwards. 2) A house with four people and PV panels on a time of use tariff where the battery is used to absorb extra energy from the PV panel and release this when the tariff is highest. 3) A house with four people and no PV on a time of use Tariff –where the battery is charged at low tariff and discharged on high tariff. 4) The battery is operating as part of an aggregated frequency response system performing on the Firm Frequency Response (FFR) market. 5)The battery is operating as part of an aggregated frequency response system performing on the Enhanced Frequency Response (EFR) market. 6) The battery is operating as part of an aggregated system looking at competing in the day ahead market. It is important to be able to take the data generated in the 6 use cases over the course of the year and produce application-specific battery systems cycle testing to help get an indication of life span. The process around this is typical:1. Quantify the charge/discharge test profile associated with each application2. Develop accelerated ageing tests around the profile.The process is complicated by the processes around ageing and degradation. This includes the yearlong data that is turned into sweat test curves that represent the typical usage that the batteries could see over a year-long period of their life. This paper looks at the development of the charge and discharge profiles of these applications and defines a set of power application “drive” cycles which are published in excel alongside this paper for use by researchers longing at battery degradation.
DOI: 10.25345/c5sw91
title: MassIVE MSV000084307 - Metabolomic Profiling of Coronary Endothelium Under Simulated Diabetes
title: We performed an untargeted metabolomic analysis of bovine coronary artery endothelial cells cultured under simulated diabetes
DOI: 10.5281/zenodo.3403215
title: PROTAC virtual screening: A retrospective screening exercise

description: My goal is to test whether retrospective virtual screening approaches can guide the design of PROTACs. As a first step, I showed that HADDOCK was the best protein-protein docking tool among those I tested to predict how E3 ligases interact with their protein substrates. Here, I ask whether docking virtual libraries of PROTAC candidates to these E3 ligase – substrate protein interfaces can be used to predict which PROTACs are active.
description: Funding Acknowledgment: The SGC is a registered charity (number 1097737) that receives funds from AbbVie, Bayer Pharma AG, Boehringer Ingelheim, Canada Foundation for Innovation, Eshelman Institute for Innovation, Genome Canada through Ontario Genomics Institute [OGI-055], Innovative Medicines Initiative (EU/EFPIA) [ULTRA-DD grant no. 115766], Janssen, Merck KGaA, Darmstadt, Germany, MSD, Novartis Pharma AG, Ontario Ministry of Research, Innovation, and Science (MRIS), Pfizer, São Paulo Research Foundation-FAPESP, Takeda, and Wellcome.
DOI: 10.5287/bodleian:8grvpv41r
title: Supporting Data - Depth-dependent oxygen redox activity in lithium-rich layered oxide cathodes
DOI: 10.17632/p3x8x928dn.1
title: EPLA_RAW DATA

description: EPLA DATA
DOI: 10.17632/zx2d698h7w.1
title: A pseudorandom based crystal plasticity finite element method for grain scale polycrystalline material modeling

description: Data of paper: A pseudorandom based crystal plasticity finite element method for grain scale polycrystalline material modeling