cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.decbvr
title: Occurrence Download

description: A dataset containing 287679 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cerastis rubricosa (Denis & Schiffermüller), 1775, Cerastium glomeratum Thuill., Cerastium arvense L.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 287679 records from 695 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235742-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ff9ct
title: Occurrence Download

description: A dataset containing 753 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "Continent is Oceania",
 "Country is Australia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is CR",
 "OccurrenceStatus is Present",
 "TaxonKey is Mammalia",
 "Year 2018-2023"
 ]
}

 The dataset includes 753 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102032-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.67vhg4
title: Occurrence Download

description: A dataset containing 99949 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cerastium arvense L., Cerastium arvense L., Cerastium arvense L.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 99949 records from 374 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235764-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tgyudq
title: Occurrence Download

description: A dataset containing 96615 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Malawi"
 ]
}

 The dataset includes 96615 records from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031192-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkj8zt
title: Occurrence Download

description: A dataset containing 4021 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Thelypteridaceae"
 ]
}

 The dataset includes 4021 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102033-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xbdu9m
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "TaxonKey is Salvia coccinea Buc'hoz ex Etl."
 ]
}

 The dataset includes 91 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025899-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.75881
title: CACHETTE DE KARNAK - CK_981_nu_2009_00221

description: Référence : nu_2009_00221<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.34816/ifao.archives.75880
title: CACHETTE DE KARNAK - CK_981_nu_2009_00220

description: Référence : nu_2009_00220<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.hnehmy
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aulaceratidae",
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013790-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2jneup
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Lophophora diffusa (Croizat) Bravo"
 ]
}

 The dataset includes 36 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025901-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b3mrrp
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mitracarpus laeteviridis C.Wright"
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042458-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.75879
title: CACHETTE DE KARNAK - CK_979_nu_2009_00219

description: Référence : nu_2009_00219<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.34816/ifao.archives.75878
title: CACHETTE DE KARNAK - CK_979_nu_2009_00218

description: Référence : nu_2009_00218<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.wnsqqe
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Phalaenopsis taenialis (Lindl.) Christenson & Pradhan"
 ]
}

 The dataset includes 57 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013770-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.75877
title: CACHETTE DE KARNAK - CK_979_nu_2009_00217

description: Référence : nu_2009_00217<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.k9crcu
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Lophophora fricii Haberm."
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025912-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.75876
title: CACHETTE DE KARNAK - CK_979_nu_2009_00216

description: Référence : nu_2009_00216<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.2nug4k
title: Occurrence Download

description: A dataset containing 377421 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Argynnis paphia (Linnaeus, 1758)"
 ]
}

 The dataset includes 377421 records from 1549 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042457-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ewwy4w
title: Occurrence Download

description: A dataset listing the 128 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Uganda",
 "EstablishmentMeans is one of (introducedAssistedColonisation, introduced)",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 128 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015312-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.adzx5f
title: Occurrence Download

description: A dataset containing 1817 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Platalea minor Temminck & Schlegel, 1849",
 "Year 2022-2024"
 ]
}

 The dataset includes 1817 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015330-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yeg8hz
title: Occurrence Download

description: A dataset containing 11121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-4.31981 36.69297,-4.21075 36.69069,-4.21007 36.77056,-4.32023 36.7691,-4.31981 36.69297))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 11121 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015331-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dezcqq
title: Occurrence Download

description: A dataset containing 1168 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Reynoutria japonica Houtt.",
 "Country is Luxembourg"
 ]
}

 The dataset includes 1168 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015334-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4hc985
title: Occurrence Download

description: A dataset containing 15060 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Begomovirus"
 ]
}

 The dataset includes 15060 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015333-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p89875
title: Occurrence Download

description: A dataset containing 2248 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus saxatilis F.Cuvier, 1823"
 ]
}

 The dataset includes 2248 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015337-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u4qy5p
title: Occurrence Download

description: A dataset containing 42430 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Patagona gigas (Vieillot, 1824)"
 ]
}

 The dataset includes 42430 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015336-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xvrnsy
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Osteocephalus sangay Chasiluisa, Caminer, Varela-Jaramillo & Ron, 2020"
 ]
}

 The dataset includes 32 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015339-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.25hpcx
title: Occurrence Download

description: A dataset containing 5199 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Podocnemis unifilis Troschel, 1848"
 ]
}

 The dataset includes 5199 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015341-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13933692
title: Metadata of other Experiments
DOI: 10.5281/zenodo.13933693
title: Metadata of other Experiments
DOI: 10.5281/zenodo.13934469
title: Training split MS2Deepscore

description: The training data split into training, validation and test set used for training the ms2deepscore model found at: https://doi.org/10.5281/zenodo.13897744The spectra are a combination of GNPS spectra, MassBank, Mona and a library created by Corinna Brungs (see MSnLib Mass spectral libraries (.mgf and .json) (zenodo.org)) preprossessed using matchms to harmonize metadata. If you use this for academic work, please make sure to cite all relevant work.The data was split by selecting 1/20th of the unique inchikeys for the training set and the validation set. So no compound in the training data appears in the test or train set. For the rest the split is random.
DOI: 10.5281/zenodo.13934470
title: Training split MS2Deepscore

description: The training data split into training, validation and test set used for training the ms2deepscore model found at: https://doi.org/10.5281/zenodo.13897744The spectra are a combination of GNPS spectra, MassBank, Mona and a library created by Corinna Brungs (see MSnLib Mass spectral libraries (.mgf and .json) (zenodo.org)) preprossessed using matchms to harmonize metadata. If you use this for academic work, please make sure to cite all relevant work.The data was split by selecting 1/20th of the unique inchikeys for the training set and the validation set. So no compound in the training data appears in the test or train set. For the rest the split is random.
DOI: 10.25345/c57w67h8d
title: MassIVE MSV000096095 - The ProCisTranomic of human ETS family
title: ETS-domain proteins are a family of evolutionarily conserved transcription factors (TFs) critical in the development of various cancers. Despite their recognized role in oncogenesis, the proteomic landscape of ETS family members remains underexplored. This study focuses on the systematic analysis of high-throughput proteomics data to decode the protein-protein interaction (PPI) networks and signal transduction pathways regulated by ETS factors in human cellular systems. Our findings uncover key PPIs that highlight both the redundancy and specificity of ETS family proteins, with a particular emphasis on their cooperative interactions with the MYC oncogene. These shared protein networks are strongly implicated in the pathogenesis of kidney renal clear cell carcinoma (KIRC) and other cancer types. By identifying key ETS-regulated proteins, we offer insights into novel molecular mechanisms that hold potential for therapeutic targeting. This proteomics-based approach enhances our understanding of ETS family proteins' regulatory roles, laying the groundwork for future research into oncogenic pathways and their implications in clinical oncology.
DOI: 10.15468/dl.eyr7q7
title: Occurrence Download

description: A dataset containing 1817 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Platalea minor Temminck & Schlegel, 1849",
 "Year 2022-2024"
 ]
}

 The dataset includes 1817 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015343-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jxcavs
title: Occurrence Download

description: A dataset containing 42727341 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fungi"
 ]
}

 The dataset includes 42727341 records from 4145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015321-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pupevn
title: Occurrence Download

description: A dataset containing 13238 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Talinum paniculatum"
 ]
}

 The dataset includes 13238 records from 473 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052085-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ugyydf
title: Occurrence Download

description: A dataset containing 361 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((69.04042 20.47910,74.19982 20.47910,74.19982 22.54177,69.04042 22.54177,69.04042 20.47910))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chromista",
 "Year 1599-2025"
 ]
}

 The dataset includes 361 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052086-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g5ufee
title: Occurrence Download

description: A dataset containing 20890 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum torvum"
 ]
}

 The dataset includes 20890 records from 462 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052087-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26388709
title: Supporting data set for article 'Groundwater-derived carbon promotes hypoxia and acidification in a large tropical estuary'

description: Submarine groundwater discharge (SGD) can carry substantial quantities of dissolved carbon from coastal aquifers into estuarine waters. However, its importance on estuarine carbon budgets is frequently neglected. Here, we resolve SGD and dissolved carbon budgets in the Pearl River Estuary (PRE), the largest estuary in Southern China surrounded by the world’s largest urban conglomerate. Results show that broadly-defined SGD contributed ~90% to the dissolved inorganic carbon (DIC) sources of the PRE exceeding riverine loads by 2–4 times. Moreover, SGD contributed 20-70% of the dissolved organic carbon (DOC) fluxes. SGD transports DIC at levels exceeding total alkalinity (TAlk) by 2.7–7 times, leading to acidification of nearshore waters. The groundwater <i>p</i>CO<sub>2</sub> was 10–36 times higher than that in estuary water. DOC mineralization derived by SGD can cause a decrease in estuary seawater pH by 0.04–0.16 and further increase bottom seawater CO<sub>2</sub> concentrations by 6.0–90.0 μmol L<sup>-1</sup>, potentially affecting local coral populations. This process also can reduce bottom seawater oxygen levels by 12.0–150.0 μmol L<sup>-1</sup> and fuel the development of hypoxic zones. Overall, SGD regionally enhanced bottom water hypoxia and seawater acidification, creating challenging conditions for coral reef survival in an already stressed ecosystem. SGD should be considered when constructing carbon and ecological assessments at the land-ocean continuum.
DOI: 10.6084/m9.figshare.26388709.v3
title: Supporting data set for article 'Groundwater-derived carbon promotes hypoxia and acidification in a large tropical estuary'

description: Submarine groundwater discharge (SGD) can carry substantial quantities of dissolved carbon from coastal aquifers into estuarine waters. However, its importance on estuarine carbon budgets is frequently neglected. Here, we resolve SGD and dissolved carbon budgets in the Pearl River Estuary (PRE), the largest estuary in Southern China surrounded by the world’s largest urban conglomerate. Results show that broadly-defined SGD contributed ~90% to the dissolved inorganic carbon (DIC) sources of the PRE exceeding riverine loads by 2–4 times. Moreover, SGD contributed 20-70% of the dissolved organic carbon (DOC) fluxes. SGD transports DIC at levels exceeding total alkalinity (TAlk) by 2.7–7 times, leading to acidification of nearshore waters. The groundwater <i>p</i>CO<sub>2</sub> was 10–36 times higher than that in estuary water. DOC mineralization derived by SGD can cause a decrease in estuary seawater pH by 0.04–0.16 and further increase bottom seawater CO<sub>2</sub> concentrations by 6.0–90.0 μmol L<sup>-1</sup>, potentially affecting local coral populations. This process also can reduce bottom seawater oxygen levels by 12.0–150.0 μmol L<sup>-1</sup> and fuel the development of hypoxic zones. Overall, SGD regionally enhanced bottom water hypoxia and seawater acidification, creating challenging conditions for coral reef survival in an already stressed ecosystem. SGD should be considered when constructing carbon and ecological assessments at the land-ocean continuum.