cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3pysgx
title: Occurrence Download

description: A dataset containing 825 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Estonia, Russian Federation, Germany, Poland, Belarus, Ukraine, Hungary)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Campylopus introflexus (Hedw.) Brid."
 ]
}

 The dataset includes 825 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056281-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rtb7hu
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mucuna persericea (Wilmot-Dear) T.M.Moura & A.M.G.Azevedo"
 ]
}

 The dataset includes 25 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056282-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.47t7d6
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon macrocarpum Thwaites"
 ]
}

 The dataset includes 19 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056283-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v6v6uk
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medinilla sarcorhiza (Baill.) Cogn."
 ]
}

 The dataset includes 24 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056284-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6wuapb
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microstegium brandisii (Hook.f.) D.Rhind"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056285-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5h3d52
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myosotis ambigens (Bég.) Grau"
 ]
}

 The dataset includes 9 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056286-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dexety
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon macrodendron Gilg ex Engl."
 ]
}

 The dataset includes 91 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056288-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sjm2xj
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Minuartia dichotoma L."
 ]
}

 The dataset includes 468 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056287-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t82dqc
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mucuna pesa De Wild."
 ]
}

 The dataset includes 49 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056289-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a53m3f
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medinilla schlechteri Mansf."
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056290-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rwshy7
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microstegium delicatulum (Hook.f.) A.Camus"
 ]
}

 The dataset includes 10 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056291-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqreqh
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myosotis anomala Riedl"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056292-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czbbw3
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon macrophyllum Thwaites"
 ]
}

 The dataset includes 23 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056293-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6fwmw9
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Minuartia ellenbeckii (Engl.) M.G.Gilbert"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056294-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shppcf
title: Occurrence Download

description: A dataset containing 228 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mucuna platyphylla A.Gray"
 ]
}

 The dataset includes 228 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056295-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vrnz7h
title: Occurrence Download

description: A dataset containing 4786 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Estonia, Russian Federation, Germany, Poland, Belarus, Ukraine, Hungary)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ceratodon purpureus (Hedw.) Brid."
 ]
}

 The dataset includes 4786 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056296-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kbjt4s
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medinilla schumanniana Mansf."
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056297-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s2b44y
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microstegium dispar (Nees ex Steud.) A.Camus"
 ]
}

 The dataset includes 25 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056298-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qz6mmc
title: Occurrence Download

description: A dataset listing the 1618 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-120.48275 34.43002,-120.41392 34.43002,-120.41392 34.4771,-120.48275 34.4771,-120.48275 34.43002))"
 ]
}

 The dataset's 1618 records were derived from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056265-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffxuga
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon madgolense Gamble"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056300-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qw9thd
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Minuartia erythrosepala (Boiss.) Hand.-Mazz."
 ]
}

 The dataset includes 106 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056301-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h7qkgs
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mucuna platyplekta Quisumb. & Merr."
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056302-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zk3shf
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medinilla scortechinii King"
 ]
}

 The dataset includes 79 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056303-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wp4tf2
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microstegium eucnemis (Nees ex Steud.) A.Camus"
 ]
}

 The dataset includes 28 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056304-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8zyqtv
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Memecylon magnifoliatum A.Fern. & R.Fern."
 ]
}

 The dataset includes 15 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056305-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ex62dx
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Minuartia eurytanica (Boiss. & Heldr.) Hand.-Mazz."
 ]
}

 The dataset includes 70 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056306-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u94sbk
title: Occurrence Download

description: A dataset containing 370 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mucuna poggei Taub."
 ]
}

 The dataset includes 370 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056307-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fhh2d7
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microstegium falconeri (Hook.f.) Clayton"
 ]
}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056309-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r4623d
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medinilla sedifolia Jum. & H.Perrier"
 ]
}

 The dataset includes 146 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056310-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3j6vx6
title: Occurrence Download

description: A dataset containing 4067 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Estonia, Russian Federation, Germany, Poland, Belarus, Ukraine, Hungary)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Climacium dendroides (Hedw.) F.Weber & D.Mohr"
 ]
}

 The dataset includes 4067 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056311-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.22604702
title: Additional file 9 of Expression of EMT-related genes in lymph node metastasis in endometrial cancer: a TCGA-based study

description: Additional file 9: Supplementary table 8. The 7 genes with the best performance in logistic regression were selected, with ERS based on which, both in TCGA and CPTAC database.
DOI: 10.6084/m9.figshare.22604702.v1
title: Additional file 9 of Expression of EMT-related genes in lymph node metastasis in endometrial cancer: a TCGA-based study

description: Additional file 9: Supplementary table 8. The 7 genes with the best performance in logistic regression were selected, with ERS based on which, both in TCGA and CPTAC database.
DOI: 10.6084/m9.figshare.22604687
title: Additional file 4 of Expression of EMT-related genes in lymph node metastasis in endometrial cancer: a TCGA-based study

description: Additional file 4: Supplementary table 3. Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were carried out by 'enrichplot' package.
DOI: 10.6084/m9.figshare.22604684.v1
title: Additional file 3 of Expression of EMT-related genes in lymph node metastasis in endometrial cancer: a TCGA-based study

description: Additional file 3: Supplementary table 2. Gene Ontology (GO) analyses were carried out by 'enrichplot' package.
DOI: 10.6084/m9.figshare.22604687.v1
title: Additional file 4 of Expression of EMT-related genes in lymph node metastasis in endometrial cancer: a TCGA-based study

description: Additional file 4: Supplementary table 3. Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were carried out by 'enrichplot' package.
DOI: 10.6084/m9.figshare.22604789.v1
title: Additional file 9 of Identification and validation of pyroptosis-related gene landscape in prognosis and immunotherapy of ovarian cancer

description: Additional file 9: Table S1. Basic characteristics of datasets enrolled in this study for identifying pyroptosis-associated genes (PYAGs) signatures. Table S2. Demographic and clinical characteristics of 1334 ovarian cancer patients from TCGA-OV and  five GEO cohorts. Table S3. Summary of 51 recognized  PYAGs. Table S4. Summary of DNA methylation modifications of 51  PYAGs with DiseaseMeth 2.0. Table S5. The prognostic values of 49 PYAGs in OC patients of TCGA-OV and  five GEO cohorts. Table S6. Spearman correlation analysis of the 49  PYAGs in OC. Table S7. The activation states of biological pathways in distinct pyroptosis-associated clusters (PACs) by GSVA enrichment analysis. Table S8. The TME score and tumor purity of OC samples were analyzed with ESTIMATETable S9. Functional annotation of the differentially expressed genes（DEGs） between the two PACs.. Table S9. Functional annotation of the differentially expressed genes（DEGs） between the two PACs.Table S9. Functional annotation of the differentially expressed genes（DEGs） between the two PACs. Table S9. Functional annotation of the differentially expressed genes（DEGs） between the two PACs. Table S10. Prognostic analysis of 889 DEGs using a univariate Cox analysis. Table S11. Distribution of PYAG scores in the different pyroptosis subtypes (Kruskal-Wallis H test, P&lt;0.01).  Table S12. Relationships between the expressions of CD8, GSDMD, GZMB and clinicopathological parameters of 65 ovarian cancer patients. Table S13. Correlation between Pyrsig score and expressions of GSDMD, GZMB in 65 ovarian cancer patients.
DOI: 10.6084/m9.figshare.22601513
title: Additional file 2 of Integrated single-molecule real-time sequencing and RNA sequencing reveal the molecular mechanisms of salt tolerance in a novel synthesized polyploid genetic bridge between maize and its wild relatives

description: Additional file 2: Table S1. SMRT sequences summary. Table S2. Statistics of unigenes unmapped to maize. Table S3. Functional annotation of unigenes unmapped to maize. Table S4. Orthologous groups in nine grass species according to maize (Mo17 and B73)-MTP-T. dactyloides ortholog relationships. Table S5. Statistics of orthologous gene set between MTP and nine grass species. Table S6. Summary statistics of RNA sequencing data. Table S7. Comparison of copy numbers of gene families in MTP that are involved in salt-saline tolerance with other species. Table S8. Expression patterns of genes in MTP that are involved in salt-saline tolerance.
DOI: 10.6084/m9.figshare.22601513.v1
title: Additional file 2 of Integrated single-molecule real-time sequencing and RNA sequencing reveal the molecular mechanisms of salt tolerance in a novel synthesized polyploid genetic bridge between maize and its wild relatives

description: Additional file 2: Table S1. SMRT sequences summary. Table S2. Statistics of unigenes unmapped to maize. Table S3. Functional annotation of unigenes unmapped to maize. Table S4. Orthologous groups in nine grass species according to maize (Mo17 and B73)-MTP-T. dactyloides ortholog relationships. Table S5. Statistics of orthologous gene set between MTP and nine grass species. Table S6. Summary statistics of RNA sequencing data. Table S7. Comparison of copy numbers of gene families in MTP that are involved in salt-saline tolerance with other species. Table S8. Expression patterns of genes in MTP that are involved in salt-saline tolerance.
DOI: 10.6084/m9.figshare.14740689.v1
title: Germline IGHV3-53-encoded RBD-targeting neutralizing antibodies are commonly present in the antibody repertoires of COVID-19 patients

description: Monoclonal antibodies (mAbs) encoded by IGHV3-53 (VH3-53) targeting the spike receptor-binding domain (RBD) have been isolated from different COVID-19 patients. However, the existence and prevalence of shared VH3-53-encoded antibodies in the antibody repertoires is not clear. Using antibody repertoire sequencing, we found that the usage of VH3-53 increased after SARS-CoV-2 infection. A highly shared VH3-53-J6 clonotype was identified in 9 out of 13 COVID-19 patients. This clonotype was derived from convergent gene rearrangements with few somatic hypermutations and was evolutionary conserved. We synthesized 34 repertoire-deduced novel VH3-53-J6 heavy chains and paired with a common IGKV1-9 light chain to produce recombinant mAbs. Most of these recombinant mAbs (23/34) possess RBD binding and virus-neutralizing activities, and recognize ACE2 binding site via the same molecular interface. Our computational analysis, validated by laboratory experiments, revealed that VH3-53 antibodies targeting RBD are commonly present in COVID-19 patients’ antibody repertoires, indicating many people have germline-like precursor sequences to rapidly generate SARS-CoV-2 neutralizing antibodies. Moreover, antigen-specific mAbs can be digitally obtained through antibody repertoire sequencing and computational analysis.
DOI: 10.6084/m9.figshare.22604789
title: Additional file 9 of Identification and validation of pyroptosis-related gene landscape in prognosis and immunotherapy of ovarian cancer

description: Additional file 9: Table S1. Basic characteristics of datasets enrolled in this study for identifying pyroptosis-associated genes (PYAGs) signatures. Table S2. Demographic and clinical characteristics of 1334 ovarian cancer patients from TCGA-OV and  five GEO cohorts. Table S3. Summary of 51 recognized  PYAGs. Table S4. Summary of DNA methylation modifications of 51  PYAGs with DiseaseMeth 2.0. Table S5. The prognostic values of 49 PYAGs in OC patients of TCGA-OV and  five GEO cohorts. Table S6. Spearman correlation analysis of the 49  PYAGs in OC. Table S7. The activation states of biological pathways in distinct pyroptosis-associated clusters (PACs) by GSVA enrichment analysis. Table S8. The TME score and tumor purity of OC samples were analyzed with ESTIMATETable S9. Functional annotation of the differentially expressed genes（DEGs） between the two PACs.. Table S9. Functional annotation of the differentially expressed genes（DEGs） between the two PACs.Table S9. Functional annotation of the differentially expressed genes（DEGs） between the two PACs. Table S9. Functional annotation of the differentially expressed genes（DEGs） between the two PACs. Table S10. Prognostic analysis of 889 DEGs using a univariate Cox analysis. Table S11. Distribution of PYAG scores in the different pyroptosis subtypes (Kruskal-Wallis H test, P&lt;0.01).  Table S12. Relationships between the expressions of CD8, GSDMD, GZMB and clinicopathological parameters of 65 ovarian cancer patients. Table S13. Correlation between Pyrsig score and expressions of GSDMD, GZMB in 65 ovarian cancer patients.