cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.58046/ooi-cp04ossm
title: Pioneer New England Shelf Offshore Surface Mooring

description: "The Pioneer Offshore Surface Mooring is located on the Continental Slope approximately 450 meters deep. The Continental Shelf-Slope area off the New England coast is a highly productive area and one that is located at a dynamic intersection where ocean currents meet in weather-like “fronts,” and where nutrients, pollutants, and other properties are exchanged between the coast and the deep ocean. Data from the offshore, slope area help to examine exchanges between the shelf and slope and the shelf ecosystem, as well as provide broader insight into the issues of air-sea gas exchange, including Carbon Dioxide.
Like other coastal moorings, the Pioneer Offshore Surface Mooring is specifically designed to examine coastal-scale phenomena and withstand the challenging conditions of shallow coastal environments, including large tidal fluctuations. The Surface Mooring contains instruments attached to a Surface Buoy floating on the sea surface, Near Surface Instrument Frame 7 meters below the surface, and a Seafloor Multi-Function Node (MFN) located on the seafloor. The Surface Buoy provides a platform on which to secure surface instruments above the sea surface, below the sea surface, and across the interface between. Additionally the Surface Buoy contains an antenna to transmit data to shore via satellite."
DOI: 10.58046/ooi-cp04ospm
title: Pioneer New England Shelf Offshore Profiler Mooring

description: "The Pioneer Offshore Profiler Mooring is located on the Continental Slope approximately 450 meters deep. The Continental Shelf-Slope area off the New England coast is a highly productive area and one that is located at a dynamic intersection where ocean currents meet in weather-like “fronts,” and where nutrients, pollutants, and other properties are exchanged between the coast and the deep ocean. Data from the offshore, slope area help to examine exchanges between the shelf and slope and the shelf ecosystem, as well as provide broader insight into the issues of air-sea gas exchange, including Carbon Dioxide.
Like other Coastal Profiler Moorings, the Pioneer Offshore Profiler Mooring contains a Wire-Following Profiler that houses instruments.  The Wire-Following Profiler moves through the water column along the mooring riser, continuously sampling ocean characteristics over a specified depth interval."
DOI: 10.26023/qjgg-4wks-hr08
title: POST: U. of Warsaw 1-hz Ultra Fast Thermometer (UFT) hot-wire temperature - NASA Ames format. Version 1.0

description: This data set contains UFT data obtained during the "Physics of Stratocumulus Tops"(POST) project off the west coast of Monterey, CA. This data set contains 1 hertz UFT data. The files are in NASA Ames format
DOI: 10.58046/ooi-cp03issp
title: Pioneer New England Shelf Inshore Surface Piercing Profiler Mooring

description: "The Pioneer Inshore Surface Piercing Profiler Mooring is located on the inner Continental Shelf, approximately 90 meters deep. The Continental Shelf-Slope area off the New England coast is a highly productive area and one that is located at a dynamic intersection where ocean currents meet in weather-like “fronts,” and where nutrients, pollutants, and other properties are exchanged between the coast and the deep ocean. Data from the inshore, shelf area help to examine exchanges between the shelf and slope and the shelf ecosystem, as well as provide broader insight into the issues of air-sea gas exchange, including Carbon Dioxide.
Like other Surface Piercing Profiler Moorings, this mooring contains a Surface Piercing Profiler that allows for the sampling of near surface phenomena as the Profiler travels through the water then breaches the surface. Fine resolution sampling of the water column, particularly at the very surface of the water, provide key insights into the exchange of gases, heat, etc between the atmosphere and the ocean. While on the surface, the profiler transmits data to shore."
DOI: 10.5281/zenodo.17256328
title: Fatores Influentes dos Níveis da Transparência Municipal Brasileira: Conjunto de Dados

description: Este conjunto de dados foi utilizado no artigo "Fatores Influentes dos Níveis da Transparência Municipal Brasileira". O estudo investiga quais variáveis exercem influência na transparência dos municípios brasileiros com baixo, médio e alto nível cultural de transparência. Os dados estão divididos em dois arquivos.

No arquivo Data, a planilha "General Data" apresenta, em sua primeira coluna, os índices de transparência de 5.568 municípios brasileiros, atribuídos pelo Ministério Público Federal (MPF) em 2016. As outras colunas apresentam 31 variáveis demogáficas, sociais, econômicas, contábeis, fiscais, políticas e institucionais relacionadas a cada município. Na planilha "missings" consta a quantidade de dados faltantes para cada variável. 

No arquivo Codes_and_results, constam todos os pacotes instalados e códigos utilizados no software R para a realização das análises estatísticas. A saber: estatísticas descritivas, análise de multicolinearidade (Matriz de Correlação e  Variance Inflation Factor) e Regressão Quantílica Quasi-Cauchy. São fornecidos comentários para cada código, de modo a orientar a replicação dos resultados.

No geral, os resultados apontam que 13, 16 e 14 variáveis impactam a transparência dos municípios brasileiros com nível cultural alto (quantil 0,75), médio (quantil 0,50) e baixo (quantil 0,25) de transparência, respectivamente.

Código JEL: H70, H83, C14.
DOI: 10.5281/zenodo.17256329
title: Fatores Influentes dos Níveis da Transparência Municipal Brasileira: Conjunto de Dados

description: Este conjunto de dados foi utilizado no artigo "Fatores Influentes dos Níveis da Transparência Municipal Brasileira". O estudo investiga quais variáveis exercem influência na transparência dos municípios brasileiros com baixo, médio e alto nível cultural de transparência. Os dados estão divididos em dois arquivos.

No arquivo Data, a planilha "General Data" apresenta, em sua primeira coluna, os índices de transparência de 5.568 municípios brasileiros, atribuídos pelo Ministério Público Federal (MPF) em 2016. As outras colunas apresentam 31 variáveis demogáficas, sociais, econômicas, contábeis, fiscais, políticas e institucionais relacionadas a cada município. Na planilha "missings" consta a quantidade de dados faltantes para cada variável. 

No arquivo Codes_and_results, constam todos os pacotes instalados e códigos utilizados no software R para a realização das análises estatísticas. A saber: estatísticas descritivas, análise de multicolinearidade (Matriz de Correlação e  Variance Inflation Factor) e Regressão Quantílica Quasi-Cauchy. São fornecidos comentários para cada código, de modo a orientar a replicação dos resultados.

No geral, os resultados apontam que 13, 16 e 14 variáveis impactam a transparência dos municípios brasileiros com nível cultural alto (quantil 0,75), médio (quantil 0,50) e baixo (quantil 0,25) de transparência, respectivamente.

Código JEL: H70, H83, C14.
DOI: 10.58046/ooi-cp03issm
title: Pioneer New England Shelf Inshore Surface Mooring

description: "The Pioneer Inshore Surface Mooring is located on the inner Continental Shelf, approximately 90 meters deep. The Continental Shelf-Slope area off the New England coast is a highly productive area and one that is located at a dynamic intersection where ocean currents meet in weather-like “fronts,” and where nutrients, pollutants, and other properties are exchanged between the coast and the deep ocean. Data from the inshore, shelf area help to examine exchanges between the shelf and slope and the shelf ecosystem, as well as provide broader insight into the issues of air-sea gas exchange, including Carbon Dioxide.
Like other Coastal Surface Moorings, the Pioneer Inshore Surface Mooring is specifically designed to examine coastal-scale phenomena and withstand the challenging conditions of shallow coastal environments, including large tidal fluctuations. The Surface Mooring contains instruments attached to a Surface Buoy floating on the sea surface, Near Surface Instrument Frame 7 meters below the surface, and a Seafloor Multi-Function Node (MFN) located on the seafloor. The Surface Buoy provides a platform on which to secure surface instruments above the sea surface, below the sea surface, and across the interface between. Additionally the Surface Buoy contains an antenna to transmit data to shore via satellite."
DOI: 10.25345/c5zs2ks3p
title: MassIVE MSV000099373 - A multi-omics exploration of biological responses upon high carotenoid intake
title: Scope Despite decades of research, aspects of the bioactive properties of carotenoids in vivo remain confounded by our limited understanding of their metabolic fates. Unbiased, systems-level approaches can help capture global metabolic shifts associated with carotenoid-rich diets. Here, we present an exploratory multi-omics integration, combining carotenoid/apocarotenoid concentrations, untargeted lipidomics, and transcriptomics, to elucidate the biological effects of tomato juices differing in beta-carotene and lycopene content. Methods and results This study leverages blood samples from a previously conducted 4-week controlled parallel arm clinical trial. Thirty-five healthy adults on standardized background diets consumed daily 360 mL high lycopene tomato juice (42.5 mg lycopene/d), high beta-carotene tomato juice (30.4 mg beta-carotene/d), or a macronutrient-matched control. Plasma (apo)carotenoids and lipid profiles pre- and post-intervention were assessed, along with whole blood transcriptomes sequenced at week 4 only. Pairwise correlations and multiblock sparse-PLS-DA were utilized for multi-omics integration. Gene-set enrichment revealed carotenoid-specific modulation of transcripts related to immune function. Thirteen lipidomic features were significantly altered after beta-carotene intake versus 2 upon high lycopene intake. Multi-omics integration resolved treatment groups, visualizing the distinct molecular signatures altered by two high carotenoid diets. This approach revealed subtle biological shifts are largely impacted by beta-apo-13-carotenone levels. We document its inverse relationship with retinoic acid receptors and its downstream genes for the first time in humans, consistent with in vitro reports that beta-apo-13-carotenone is an antagonist for retinoic acid signaling. Conclusion Multi-omics integration uncovers testable, hypothesis-generating insights about carotenoid metabolism and how metabolites may modulate molecular signaling pathways in humans.
DOI: 10.15468/dl.z6zafa
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ranunculus millefoliatus",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043856-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.58046/ooi-cp03ispm
title: Pioneer New England Shelf Inshore Profiler Mooring

description: "The Pioneer Inshore Profiler Mooring is located on the inner Continental Shelf, approximately 90 meters deep. The Continental Shelf-Slope area off the New England coast is a highly productive area and one that is located at a dynamic intersection where ocean currents meet in weather-like “fronts,” and where nutrients, pollutants, and other properties are exchanged between the coast and the deep ocean. Data from the inshore, shelf area help to examine exchanges between the shelf and slope and the shelf ecosystem, as well as provide broader insight into the issues of air-sea gas exchange, including Carbon Dioxide.
Like other Coastal Profiler Moorings, the Pioneer Central Inshore Profiler Mooring contains a Wire-Following Profiler that houses instruments. The Wire-Following Profiler moves through the water column along the mooring riser, continuously sampling ocean characteristics over a specified depth interval."
DOI: 10.26023/nhbr-f0q6-fd0k
title: POST: U. of Warsaw 100-hz Ultra Fast Thermometer (UFT) hot-wire temperature - NASA Ames format. Version 1.0

description: This data set contains UFT data obtained during the "Physics of Stratocumulus Tops"(POST) project off the west coast of Monterey, CA. This data set contains 100 hertz UFT data. The files are in NASA Ames format
DOI: 10.5286/isis.e.rb2590199-1
title: Investigation of the antiferromagnet/Co exchange bias heterostructures
DOI: 10.14288/1.0450266
title: Galapagos Farmer perspectives on bird ecosystem services and disservices and planting native trees

description: The dataset comes from field interviews conducted with 53 farmers on Santa Cruz Island, Galapagos to better understand farmers' perspectives on bird ecosystem (dis)services and willingness, motivations, and hesitations to planting native trees on their farms. The data is a mix of quantitative and qualitative questions.
DOI: 10.14288/1.0450292
title: Data on composition and structure of trees inside and outside of forests in Guanacaste, Costa Rica: comparisons among conservation areas, fencerows, and municipal parks

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Many studies of tropical forest ecology occur in protected areas such as national parks.  We have a limited understanding of the composition and structure of trees in areas outside forests, such as urban areas or along roads. Here we report three datasets that are critical for understanding how tree communities differ in Guanacaste, Costa Rica. Our data allow the user to contrast trees in three different land-use types that represent a rural to urban gradient: forests inside conservation areas (20 plots), fencerows (68 plots), and municipal parks (36 parks).  We measured and identified trees &gt;7cm diameter in addition to collecting ancillary data such as plot area (in hectares) and canopy cover (in percent). We also collated information for each identified species on functional characteristics including: status as native to Guanacaste, Costa Rica, leaf habit (evergreen, deciduous, or other) and whether the tree species produces fruit that are edible for humans. Collectively, these data allow the user to calculate stand-level properties such as basal area and percentage of the tree community that is evergreen.&lt;/p&gt;
DOI: 10.14288/1.0450290
title: Regulation of Ca2+ leak and susceptibility to malignant hyperthermia and heat stroke

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Sarcoplasmic reticulum (SR) Ca2+ leak is elevated in many myopathies, but whether Ca2+ leak is a driver or consequence of the disease process is not always clear. The Ryanodine Receptor, RYR1, is the SR Ca2+ release channel required for both muscle contraction and Ca2+ leak. SPEG (striated muscle preferentially expressed protein kinase) regulates the Ca2+ leak properties of RYR1 by phosphorylation of serine 2902. Mutation of Serine S2902 to an aspartic acid to mimic SPEG phosphorylation of RYR1 decreases muscle temperature-dependent SR Ca2+ leak, restores the levels of excitation-contraction coupling proteins, and reduces the heat and volatile anesthetic sensitivity of mice with a malignant hyperthermia susceptibility mutation in RYR1 (Y524S, Y522S in humans). The S2902D mice allow a direct test of the role of SR Ca2+ leak in both normal muscle function (aging, exercise) and mice disease pathophysiology.&lt;/p&gt;
DOI: 10.14288/1.0450291
title: Data for: Critical habitat thresholds for effective pollinator conservation in agricultural landscapes

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Biodiversity in human-dominated landscapes is declining, but evidence-based conservation targets to guide international policies for such landscapes are lacking. We present a framework for informing habitat conservation policies based on the enhancement of habitat quantity and quality and define thresholds of habitat quantity at which it becomes effective to also prioritize habitat quality. We applied this framework to pollinators, an important part of agroecosystem biodiversity, by synthesizing 59 studies from 19 countries. Given low habitat quality, hoverflies had the lowest threshold at 6% semi-natural habitat cover, followed by solitary bees (16%), bumble bees (18%), and butterflies (37%). These figures represent minimum habitat thresholds in agricultural landscapes, but when habitat quantity is restricted, marked increases in quality are required to reach similar outcomes.&lt;/p&gt;
DOI: 10.58046/ooi-cp02pmuo
title: Pioneer New England Shelf Upstream Offshore Profiler Mooring

description: "The Pioneer Upstream Offshore Profiler Mooring is located on the Continental Slope (approximately 450 m deep), east (i.e., upstream) of the other Moorings.  The Continental Shelf-Slope area off the New England coast is a highly productive area and one that is located at a dynamic intersection where ocean currents meet in weather-like “fronts,” and where nutrients, pollutants, and other properties are exchanged between the coast and the deep ocean. Data from the offshore slope area help to examine exchanges between the shelf and slope and the shelf ecosystem, as well as provide broader insight into the issues of air-sea gas exchange, including Carbon Dioxide.
Like other Coastal Profiler Moorings, the Pioneer Upstream Offshore Profiler Mooring contains a Wire-Following Profiler that houses instruments.  The Wire-Following Profiler moves through the water column along the mooring riser, continuously sampling ocean characteristics over a specified depth interval."
DOI: 10.14288/1.0450293
title: The effects of hot-iron application method on wound characteristics and healing in dairy calves

description: Hot-iron disbudding is the most commonly used method for horn bud removal in dairy calves. While factors such as post-treatment care, calf age, and hot-iron brand have been studied in relation to wound healing, procedural factors—such as application time and tip size—have received little attention. The objective of this study was to evaluate the effects of hot-iron application time and tip size on wound characteristics and healing progression. Female Holstein calves (n = 24) were randomly assigned to one of two application times: 10 s vs. 20 s. Within each calf, one horn bud was disbudded using a small tip and the other with a large tip. Disbudding was performed at 28 d of age using multimodal pain management (sedation, local nerve block, and analgesics). Wound size and depth were measured on the day of disbudding and every three days thereafter until the wounds had fully re-epithelialized. Wounds were also photographed for classification of tissue type. Wounds resulting from the large tip were larger and shallower than those created with the smaller tip, requiring more time to re-epithelialize (51.9 ± 2.04 d vs. 45.3 ± 2.04 d). Wounds from the 20-s application were larger and deeper than those from the 10-s application, but this did not result in increased time to re-epithelialization. Evidence of horn development after disbudding was observed in 15 of the 24 buds treated with the small tip versus 3 of the 24 treated with the larger tip. These findings suggest that larger tips increase wound size and healing times, and that a 10-s application time is sufficient to prevent horn growth.
DOI: 10.58046/ooi-cp02pmui
title: Pioneer New England Shelf Upstream Inshore Profiler Mooring

description: "The Pioneer Upstream Inshore Profiler Mooring is located on the inner Continental Shelf (approximately 90 m deep), east (i.e., upstream) of the other Moorings.  The Continental Shelf-Slope area off the New England coast is a highly productive area and one that is located at a dynamic intersection where ocean currents meet in weather-like “fronts,” and where nutrients, pollutants, and other properties are exchanged between the coast and the deep ocean. Data from the inner shelf area help to examine exchanges between the shelf and slope and the shelf ecosystem, as well as provide broader insight into the issues of air-sea gas exchange, including Carbon Dioxide.
Like other Coastal Profiler Moorings, the Pioneer Upstream Inshore Profiler Mooring contains a Wire-Following Profiler that houses instruments.  The Wire-Following Profiler moves through the water column along the mooring riser, continuously sampling ocean characteristics over a specified depth interval."
DOI: 10.26023/ene0-mbrn-8a12
title: POST: U. of Warsaw 1000-hz Ultra Fast Thermometer (UFT) hot-wire temperature - NASA Ames format. Version 1.0

description: This data set contains UFT data obtained during the "Physics of Stratocumulus Tops"(POST) project off the west coast of Monterey, CA. This data set contains 1000 hertz UFT data. The files are in NASA Ames format
DOI: 10.58046/ooi-cp02pmco
title: Pioneer New England Shelf Central Offshore Profiler Mooring

description: "The Pioneer Central Offshore Profiler Mooring is located at the Continental Shelf-Slope Break approximately 150 meters deep. The Continental Shelf-Slope area off the New England coast is a highly productive area and one that is located at a dynamic intersection where ocean currents meet in weather-like “fronts,” and where nutrients, pollutants, and other properties are exchanged between the coast and the deep ocean. Data from the slope break area help to examine exchanges between the shelf and slope and the shelf ecosystem, as well as provide broader insight into the issues of air-sea gas exchange, including Carbon Dioxide.
Like other Coastal Profiler Moorings, the Pioneer Central Offshore Profiler Mooring contains a Wire-Following Profiler that houses instruments.  The Wire-Following Profiler moves through the water column along the mooring riser, continuously sampling ocean characteristics over a specified depth interval.
"
DOI: 10.15468/dl.sexy6x
title: Occurrence Download

description: A dataset listing the 47550 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cecidomyiidae"
 ]
}

 The dataset's 47550 records were derived from 619 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043843-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26011986
title: Additional file 2 of Whole transcriptome analysis to identify non-coding RNA regulators and hub genes in sperm of non-obstructive azoospermia by microarray, single-cell RNA sequencing, weighted gene co-expression network analysis, and mRNA-miRNA-lncRNA interaction analysis

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26011986.v1
title: Additional file 2 of Whole transcriptome analysis to identify non-coding RNA regulators and hub genes in sperm of non-obstructive azoospermia by microarray, single-cell RNA sequencing, weighted gene co-expression network analysis, and mRNA-miRNA-lncRNA interaction analysis

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26732119
title: Additional file 3 of Whole transcriptome analysis to identify non-coding RNA regulators and hub genes in sperm of non-obstructive azoospermia by microarray, single-cell RNA sequencing, weighted gene co-expression network analysis, and mRNA-miRNA-lncRNA interaction analysis

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26732119.v1
title: Additional file 3 of Whole transcriptome analysis to identify non-coding RNA regulators and hub genes in sperm of non-obstructive azoospermia by microarray, single-cell RNA sequencing, weighted gene co-expression network analysis, and mRNA-miRNA-lncRNA interaction analysis

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26011845
title: Additional file 1 of Shared genetic effect of kidney function on bipolar and major depressive disorders: a large-scale genome-wide cross-trait analysis

description: Additional file 1. Supplementary Table 1. Summary of GWAS data.