cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13489485
title: Three Excel data show the experimental results detail from Common cuckoo females remove more conspicuous eggs during parasitism

description: Avian obligate brood parasites gain an advantage by removing the eggs of the cuckoos who have already visited the nest, which can increase the chances of survival for their offspring. Conversely, to prevent their eggs from being picked up by the next parasitic cuckoo, they need to take some precautions. Egg mimicry and egg crypsis are two alternative strategies to prevent the parasitized egg from being picked up by another parasitic cuckoo. Here, we tested whether the egg crypsis hypothesis has a preventative effect when common cuckoos (<i>Cuculus canorus</i>) parasitize their Oriental reed warbler (<i>Acrocephalus orientalis</i>) hosts. We designed two experimental groups with different crypsis effects to induce common cuckoos to lay eggs and observed whether the cuckoos selectively picked up the experimental eggs with low crypsis levels in the process of parasitism. Our results supported the egg crypsis hypothesis; the observed cuckoos significantly preferred to select the more obvious white model eggs. This shows that even in an open nest, eggs that are adequately hidden can also be protected from being picked up by cuckoo females during parasitism so as to increase the survival chance of their own parasitic eggs.
DOI: 10.6084/m9.figshare.13489482.v1
title: Five videos about cuckoos selection of egg-laying from Common cuckoo females remove more conspicuous eggs during parasitism

description: Avian obligate brood parasites gain an advantage by removing the eggs of the cuckoos who have already visited the nest, which can increase the chances of survival for their offspring. Conversely, to prevent their eggs from being picked up by the next parasitic cuckoo, they need to take some precautions. Egg mimicry and egg crypsis are two alternative strategies to prevent the parasitized egg from being picked up by another parasitic cuckoo. Here, we tested whether the egg crypsis hypothesis has a preventative effect when common cuckoos (<i>Cuculus canorus</i>) parasitize their Oriental reed warbler (<i>Acrocephalus orientalis</i>) hosts. We designed two experimental groups with different crypsis effects to induce common cuckoos to lay eggs and observed whether the cuckoos selectively picked up the experimental eggs with low crypsis levels in the process of parasitism. Our results supported the egg crypsis hypothesis; the observed cuckoos significantly preferred to select the more obvious white model eggs. This shows that even in an open nest, eggs that are adequately hidden can also be protected from being picked up by cuckoo females during parasitism so as to increase the survival chance of their own parasitic eggs.
DOI: 10.6084/m9.figshare.13489482
title: Five videos about cuckoos selection of egg-laying from Common cuckoo females remove more conspicuous eggs during parasitism

description: Avian obligate brood parasites gain an advantage by removing the eggs of the cuckoos who have already visited the nest, which can increase the chances of survival for their offspring. Conversely, to prevent their eggs from being picked up by the next parasitic cuckoo, they need to take some precautions. Egg mimicry and egg crypsis are two alternative strategies to prevent the parasitized egg from being picked up by another parasitic cuckoo. Here, we tested whether the egg crypsis hypothesis has a preventative effect when common cuckoos (<i>Cuculus canorus</i>) parasitize their Oriental reed warbler (<i>Acrocephalus orientalis</i>) hosts. We designed two experimental groups with different crypsis effects to induce common cuckoos to lay eggs and observed whether the cuckoos selectively picked up the experimental eggs with low crypsis levels in the process of parasitism. Our results supported the egg crypsis hypothesis; the observed cuckoos significantly preferred to select the more obvious white model eggs. This shows that even in an open nest, eggs that are adequately hidden can also be protected from being picked up by cuckoo females during parasitism so as to increase the survival chance of their own parasitic eggs.
DOI: 10.6084/m9.figshare.18208099.v1
title: D-methionine administered as late as 36 hours post-noise exposure rescues from permanent threshold shift and dose-dependently increases serum antioxidant levels

description: To elucidate D-methionine’s (D-met) dose and time rescue parameters from steady-state or impulse noise-induced permanent threshold shift (PTS) and determine D-met rescue’s influence on serum and cochlear antioxidant levels. Five D-met doses at 0, 50, 100, or 200 mg/kg/dose administered starting at 1, 24, or 36 hours post steady-state or impulse noise exposure. Auditory brainstem responses at baseline and 21 days post-noise measured PTS. Serum (superoxide dismutase [SOD], catalase [CAT],, glutathione reductaseand glutathione peroxidase [GPx]) and cochlear (Glutathione [GSH] and glutathione disulphide [GSSG]) antioxidant levels measured physiological impact. <i>Chinchillas</i> (10/study group; 6–8/confirmatory groups). D-met significantly reduced PTS for impulse noise (100 mg [2, 6, 14 and 20 kHz]; 200 mg [2, 14 and 20 kHz]) and steady-state noise (all dosing groups, time parameters and tested frequencies). PTS reduction did not significantly vary by rescue time. D-met significantly increased serum SOD (100 and 200 mg for 24 hour rescue) and GPx (50 mg/kg at 24 hour rescue) at 21 days post-noise. Cochlear GSH and GSSG levels were unaffected relative to control. D-met rescues from steady-state and impulse noise-induced PTS even when administered up to 36 hours post-noise and dose-dependently influences serum antioxidant levels even 21 days post-noise. D-met’s broad and effective dose/time window renders it a promising antioxidant rescue agent.
DOI: 10.6084/m9.figshare.8246570.v1
title: Additional file 3: of Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

description: All differential proteins compared Y with B (quantitative). There are 1684 differential proteins quantified including 51 significant differentially expressed genes (DEPs), and another 85 proteins were qualitatively analysed. (XLS 1602 kb)
DOI: 10.6084/m9.figshare.8246573.v1
title: MOESM2 of Metabolic engineering to enhance biosynthesis of both docosahexaenoic acid and odd-chain fatty acids in Schizochytrium sp. S31

description: Additional file 2: Table S1. Fatty acids profiles in the wild type, S-E, S-M and S-M-E strains. Table S2. LCâ MS metabolomics data sets of S-M and S-M-E strains. Table S3. The production cost of DHA and OCFAs in the wild type and S-M-E strains. Table S4. Primers used in this study.
DOI: 10.6084/m9.figshare.8246576
title: Additional file 4: of Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

description: GO enrichment analysis at level 2 for DEGs for three main categories (Biological Process, Cellular Component and Molecular Function) (XLS 235 kb)
DOI: 10.6084/m9.figshare.8246576.v1
title: Additional file 4: of Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

description: GO enrichment analysis at level 2 for DEGs for three main categories (Biological Process, Cellular Component and Molecular Function) (XLS 235 kb)
DOI: 10.5517/ccdc.csd.cc23fllr
title: CCDC 1949484: Experimental Crystal Structure Determination

description: Related Article: Benjamin J. Frogley, Anthony F. Hill, Lachlan J. Watson|2019|Chem.Commun.|55|14450|doi:10.1039/C9CC07757J
description: Related Article: Lachlan J. Watson, Anthony F. Hill|2024|Dalton Trans.|53|3629|doi:10.1039/D3DT03997H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.11916984.v1
title: Additional file 2 of Genome sequencing of gut symbiotic Bacillus velezensis LC1 forÂ bioethanol production from bamboo shoots

description: Additional file 2: Table S1. COG annotations of carbohydrate metabolism in genome of B. velezensis LC1.
DOI: 10.6084/m9.figshare.8246585
title: Additional file 5: of Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

description: Unigenes divided into nine parts for analysis of correlations between transcriptomic and label-free proteomic. (XLS 562 kb)
DOI: 10.6084/m9.figshare.8246585.v1
title: Additional file 5: of Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

description: Unigenes divided into nine parts for analysis of correlations between transcriptomic and label-free proteomic. (XLS 562 kb)
DOI: 10.5517/ccdc.csd.cc23flms
title: CCDC 1949485: Experimental Crystal Structure Determination

description: Related Article: Benjamin J. Frogley, Anthony F. Hill, Lachlan J. Watson|2019|Chem.Commun.|55|14450|doi:10.1039/C9CC07757J
description: Related Article: Lachlan J. Watson, Anthony F. Hill|2024|Dalton Trans.|53|3629|doi:10.1039/D3DT03997H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.12965583
title: Additional file 2 of Comparative analysis of maca (Lepidium meyenii) proteome profiles reveals insights into response mechanisms of herbal plants to high-temperature stress

description: Additional file 2 Table S2. List of 6966 proteins identified using TMT-based proteomic approach in this study.
DOI: 10.6084/m9.figshare.7203626.v1
title: Additional file 1: of Associations of sclerostin with carotid artery atherosclerosis and all-cause mortality in Chinese patients undergoing maintenance hemodialysis

description: Datasheet S1. Original dataset. (XLS 51 kb)
DOI: 10.6084/m9.figshare.11917008
title: Additional file 6 of Genome sequencing of gut symbiotic Bacillus velezensis LC1 forÂ bioethanol production from bamboo shoots

description: Additional file 6: Table S5. CAZy annotation in the genome of B. velezensis LC1.
DOI: 10.6084/m9.figshare.12965586
title: Additional file 3 of Comparative analysis of maca (Lepidium meyenii) proteome profiles reveals insights into response mechanisms of herbal plants to high-temperature stress

description: Additional file 3 Table S3. List of identified proteins significant differentially expressed in two-week-old maca seedlings under high-temperature stress (HTS) for 12 h.
DOI: 10.6084/m9.figshare.13489485.v1
title: Three Excel data show the experimental results detail from Common cuckoo females remove more conspicuous eggs during parasitism

description: Avian obligate brood parasites gain an advantage by removing the eggs of the cuckoos who have already visited the nest, which can increase the chances of survival for their offspring. Conversely, to prevent their eggs from being picked up by the next parasitic cuckoo, they need to take some precautions. Egg mimicry and egg crypsis are two alternative strategies to prevent the parasitized egg from being picked up by another parasitic cuckoo. Here, we tested whether the egg crypsis hypothesis has a preventative effect when common cuckoos (<i>Cuculus canorus</i>) parasitize their Oriental reed warbler (<i>Acrocephalus orientalis</i>) hosts. We designed two experimental groups with different crypsis effects to induce common cuckoos to lay eggs and observed whether the cuckoos selectively picked up the experimental eggs with low crypsis levels in the process of parasitism. Our results supported the egg crypsis hypothesis; the observed cuckoos significantly preferred to select the more obvious white model eggs. This shows that even in an open nest, eggs that are adequately hidden can also be protected from being picked up by cuckoo females during parasitism so as to increase the survival chance of their own parasitic eggs.
DOI: 10.6084/m9.figshare.12965586.v1
title: Additional file 3 of Comparative analysis of maca (Lepidium meyenii) proteome profiles reveals insights into response mechanisms of herbal plants to high-temperature stress

description: Additional file 3 Table S3. List of identified proteins significant differentially expressed in two-week-old maca seedlings under high-temperature stress (HTS) for 12 h.
DOI: 10.6084/m9.figshare.18208099
title: D-methionine administered as late as 36 hours post-noise exposure rescues from permanent threshold shift and dose-dependently increases serum antioxidant levels

description: To elucidate D-methionine’s (D-met) dose and time rescue parameters from steady-state or impulse noise-induced permanent threshold shift (PTS) and determine D-met rescue’s influence on serum and cochlear antioxidant levels. Five D-met doses at 0, 50, 100, or 200 mg/kg/dose administered starting at 1, 24, or 36 hours post steady-state or impulse noise exposure. Auditory brainstem responses at baseline and 21 days post-noise measured PTS. Serum (superoxide dismutase [SOD], catalase [CAT],, glutathione reductaseand glutathione peroxidase [GPx]) and cochlear (Glutathione [GSH] and glutathione disulphide [GSSG]) antioxidant levels measured physiological impact. <i>Chinchillas</i> (10/study group; 6–8/confirmatory groups). D-met significantly reduced PTS for impulse noise (100 mg [2, 6, 14 and 20 kHz]; 200 mg [2, 14 and 20 kHz]) and steady-state noise (all dosing groups, time parameters and tested frequencies). PTS reduction did not significantly vary by rescue time. D-met significantly increased serum SOD (100 and 200 mg for 24 hour rescue) and GPx (50 mg/kg at 24 hour rescue) at 21 days post-noise. Cochlear GSH and GSSG levels were unaffected relative to control. D-met rescues from steady-state and impulse noise-induced PTS even when administered up to 36 hours post-noise and dose-dependently influences serum antioxidant levels even 21 days post-noise. D-met’s broad and effective dose/time window renders it a promising antioxidant rescue agent.
DOI: 10.6084/m9.figshare.12965595
title: Additional file 6 of Comparative analysis of maca (Lepidium meyenii) proteome profiles reveals insights into response mechanisms of herbal plants to high-temperature stress

description: Additional file 6 Table S6. List of 7 differentially expressed proteins that were involved in the porphyrin and chlorophyll metabolism pathway.
DOI: 10.6084/m9.figshare.12441311
title: Additional file 3 of Initiator and executioner caspases in salivary gland apoptosis of Rhipicephalus haemaphysaloides

description: Additional file 3: Alignment S1. Sequences of unigenes (FASTA format).
DOI: 10.6084/m9.figshare.11917038
title: Additional file 1 of Detection of CNV in the SH3RF2 gene and its effects on growth and carcass traits in chickens

description: Additional file 1: Table S1. The Genotypic information on the studied chicken breeds. (XLS 234 kb)
DOI: 10.6084/m9.figshare.12441125
title: Additional file 2 of Long non-coding RNAs in ovarian granulosa cells

description: Additional file 2. The eight novel lncRNAs in GCs that were associated with risk factors for OHSS.
DOI: 10.6084/m9.figshare.12965619.v1
title: Additional file 2 of Revealing the full-length transcriptome of caucasian clover rhizome development

description: Additional file 2: Table S1. The prediction of SSRs.
DOI: 10.6084/m9.figshare.12965634.v1
title: Additional file 5 of Revealing the full-length transcriptome of caucasian clover rhizome development

description: Additional file 5: Table S2. Statistics of comparison results between the Illumina sequencing data and the non-redundant transcripts
DOI: 10.6084/m9.figshare.12965637.v1
title: Additional file 6 of Revealing the full-length transcriptome of caucasian clover rhizome development

description: Additional file 6: Table S3. The prediction of caucasian clover rhizome transcription factor (TF) family.
DOI: 10.6084/m9.figshare.12965618
title: Additional file 1 of Transcriptome profiling at osmotic and ionic phases of salt stress response in bread wheat uncovers trait-specific candidate genes

description: Additional file 1: Table S1. Overview of reads processing and reference genome mapping from all libraries.
DOI: 10.6084/m9.figshare.12965618.v1
title: Additional file 1 of Transcriptome profiling at osmotic and ionic phases of salt stress response in bread wheat uncovers trait-specific candidate genes

description: Additional file 1: Table S1. Overview of reads processing and reference genome mapping from all libraries.
DOI: 10.3217/4rwvv-n5j05
title: DFT and MTP Calculations for HKUST-1

description: Supplementary data including input and output files of VASP, FHI-aims and MLIP calculations are provided.

For detailed descriptions and clearer results, please consult the main paper and its Supplementary Materials.
DOI: 10.3217/nscwp-tsd84
title: DFT and MTP Calculations for HKUST-1

description: Supplementary data including input and output files of VASP, FHI-aims and MLIP calculations are provided.

For detailed descriptions and clearer results, please consult the main paper and its Supplementary Materials.
DOI: 10.6084/m9.figshare.12441158
title: Additional file 4 of Genome-wide association study identifies genetic susceptibility loci and pathways of radiation-induced acute oral mucositis

description: Additional file 4: Table S3. Association P-values for all lead SNPs for severe oral mucositis.
DOI: 10.6084/m9.figshare.12965385
title: Additional file 2 of Diet-induced changes in bacterial communities in the jejunum and their associations with bile acids in Angus beef cattle

description: Additional file 2:. OTU table and the family level abundance table for fecal bacterial communities.
DOI: 10.6084/m9.figshare.12441164
title: Additional file 6 of Genome-wide association study identifies genetic susceptibility loci and pathways of radiation-induced acute oral mucositis

description: Additional file 6: Table S5. eQTL linking GWAS risk SNPs of severe oral mucositis to mapped genes.
DOI: 10.6084/m9.figshare.12441359.v1
title: Additional file 2 of A bioinformatics investigation into the pharmacological mechanisms of javanica oil emulsion injection in non-small cell lung cancer based on network pharmacology methodologies

description: Additional file 2: Supplementary 2. List of GO enrichment results of potential targets of JOEI associated with NSCLC.
DOI: 10.6084/m9.figshare.12441371
title: Additional file 4 of A bioinformatics investigation into the pharmacological mechanisms of javanica oil emulsion injection in non-small cell lung cancer based on network pharmacology methodologies

description: Additional file 4: Supplementary 4. RSs of candidate mRNAs for each NSCLC patient.
DOI: 10.6084/m9.figshare.12441170.v1
title: Additional file 7 of Genome-wide association study identifies genetic susceptibility loci and pathways of radiation-induced acute oral mucositis

description: Additional file 7: Table S6. Chromatin interaction regions linking GWAS risk loci of severe oral mucositis to mapped genes.
DOI: 10.6084/m9.figshare.12441371.v1
title: Additional file 4 of A bioinformatics investigation into the pharmacological mechanisms of javanica oil emulsion injection in non-small cell lung cancer based on network pharmacology methodologies

description: Additional file 4: Supplementary 4. RSs of candidate mRNAs for each NSCLC patient.
DOI: 10.6084/m9.figshare.12965385.v1
title: Additional file 2 of Diet-induced changes in bacterial communities in the jejunum and their associations with bile acids in Angus beef cattle

description: Additional file 2:. OTU table and the family level abundance table for fecal bacterial communities.
DOI: 10.6084/m9.figshare.12965388
title: Additional file 3 of Diet-induced changes in bacterial communities in the jejunum and their associations with bile acids in Angus beef cattle

description: Additional file 3:. Feature tables, including OTU table, family level abundance table, and the differential genera, OTUs, and KEGGs.
DOI: 10.6084/m9.figshare.12965388.v1
title: Additional file 3 of Diet-induced changes in bacterial communities in the jejunum and their associations with bile acids in Angus beef cattle

description: Additional file 3:. Feature tables, including OTU table, family level abundance table, and the differential genera, OTUs, and KEGGs.
DOI: 10.6084/m9.figshare.12965463.v1
title: Additional file 1 of Cultural adaptation of the mental health first aid guidelines for assisting a person at risk of suicide to China: a Delphi expert consensus study

description: Additional file 1. Statements that were presented to the panel and their ratings across 2 rounds of the survey.
DOI: 10.6084/m9.figshare.14532273.v1
title: Additional file 3 of Conversion of stem cells from apical papilla into endothelial cells by small molecules and growth factors

description: Additional file 3.
DOI: 10.6084/m9.figshare.12441137
title: Additional file 10 of Genome-wide association study identifies genetic susceptibility loci and pathways of radiation-induced acute oral mucositis

description: Additional file 10: Table S7. The top 20 significantly gene sets analysis for radiation-induced oral mucositis.
DOI: 10.6084/m9.figshare.25251583
title: PHO data set

description: The study was conducted at Kasturba Hospital, Manipal
DOI: 10.6084/m9.figshare.25251583.v1
title: PHO data set

description: The study was conducted at Kasturba Hospital, Manipal
DOI: 10.6084/m9.figshare.11916852.v1
title: Additional file 7 of FKBP9 promotes the malignant behavior of glioblastoma cells and confers resistance to endoplasmic reticulum stress inducers

description: Additional file 7: Table S1. Case information and pathological diagnosis of glioma patient tissue sections. Case information and pathological diagnosis were provided by the Second Affiliated Hospital of Dalian Medical University.
DOI: 10.6084/m9.figshare.12965463
title: Additional file 1 of Cultural adaptation of the mental health first aid guidelines for assisting a person at risk of suicide to China: a Delphi expert consensus study

description: Additional file 1. Statements that were presented to the panel and their ratings across 2 rounds of the survey.
DOI: 10.6084/m9.figshare.11916888
title: Additional file 3 of LncRNA profile study reveals a seven-lncRNA signature predicts the prognosis of patients with colorectal cancer

description: Additional file 3 Table S5. Gene set enrichment analysis (GSEA) results of GSE39582 cohort.
DOI: 10.6084/m9.figshare.11916891
title: Additional file 4 of LncRNA profile study reveals a seven-lncRNA signature predicts the prognosis of patients with colorectal cancer

description: Additional file 4 Table S6A. LncRNAs associated protein identified in ENCORI database. Table S6B. LncRNAs associated miRNAs identified in ENCORI database.
DOI: 10.6084/m9.figshare.12441137.v1
title: Additional file 10 of Genome-wide association study identifies genetic susceptibility loci and pathways of radiation-induced acute oral mucositis

description: Additional file 10: Table S7. The top 20 significantly gene sets analysis for radiation-induced oral mucositis.
DOI: 10.6084/m9.figshare.11916852
title: Additional file 7 of FKBP9 promotes the malignant behavior of glioblastoma cells and confers resistance to endoplasmic reticulum stress inducers

description: Additional file 7: Table S1. Case information and pathological diagnosis of glioma patient tissue sections. Case information and pathological diagnosis were provided by the Second Affiliated Hospital of Dalian Medical University.