cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26587167.v1
title: Additional file 2 of Investigating the genetic components of tuber bruising in a breeding population of tetraploid potatoes

description: Additional file 2. Supplementary Table 3.
DOI: 10.6084/m9.figshare.26587308
title: Additional file 1 of First case report of splenomegaly with splenic infarction due to aortic graft infection

description: Additional file 1.
DOI: 10.6084/m9.figshare.26587308.v1
title: Additional file 1 of First case report of splenomegaly with splenic infarction due to aortic graft infection

description: Additional file 1.
DOI: 10.6084/m9.figshare.26641345
title: Additional file 1 of A phylogeny of the evening primrose family (Onagraceae) using a target enrichment approach with 303 nuclear loci

description: Additional file 1: Table S1. Table of all samples in the analysis, collecting locations, and where deposited.
DOI: 10.6084/m9.figshare.26641345.v1
title: Additional file 1 of A phylogeny of the evening primrose family (Onagraceae) using a target enrichment approach with 303 nuclear loci

description: Additional file 1: Table S1. Table of all samples in the analysis, collecting locations, and where deposited.
DOI: 10.6084/m9.figshare.26641351
title: Additional file 1 of Near complete genome sequences from Southern Vietnam revealed local features of genetic diversity and intergenerational changes in SARS- CoV-2 variants in 2020–2021

description: Additional file 1:  Supplementary Table. Samples used in the study.
DOI: 10.6084/m9.figshare.26641351.v1
title: Additional file 1 of Near complete genome sequences from Southern Vietnam revealed local features of genetic diversity and intergenerational changes in SARS- CoV-2 variants in 2020–2021

description: Additional file 1:  Supplementary Table. Samples used in the study.
DOI: 10.6084/m9.figshare.26587266
title: Additional file 4 of COVID-19 infection and vaccination uptake in men and gender-diverse people who have sex with men in the UK: analyses of a large, online community cross-sectional survey (RiiSH-COVID) undertaken November–December 2021

description: Additional file 4.
DOI: 10.6084/m9.figshare.26587266.v1
title: Additional file 4 of COVID-19 infection and vaccination uptake in men and gender-diverse people who have sex with men in the UK: analyses of a large, online community cross-sectional survey (RiiSH-COVID) undertaken November–December 2021

description: Additional file 4.
DOI: 10.6084/m9.figshare.26587410
title: Additional file 3 of Safety and efficacy of apatinib in patients with advanced gastric or gastroesophageal junction adenocarcinoma after the failure of two or more lines of chemotherapy (AHEAD): a prospective, single-arm, multicenter, phase IV study

description: Additional file 3. AHEAD Study Raw Data.
DOI: 10.6084/m9.figshare.26587410.v1
title: Additional file 3 of Safety and efficacy of apatinib in patients with advanced gastric or gastroesophageal junction adenocarcinoma after the failure of two or more lines of chemotherapy (AHEAD): a prospective, single-arm, multicenter, phase IV study

description: Additional file 3. AHEAD Study Raw Data.
DOI: 10.5281/zenodo.13318261
title: Supplementary materials - Exploring a Framework for Assessing the Socio-Ecological Performance of Systems Design

description: Supplementary materials for the paper presented for the Cirp LCE Conference 2025: Exploring a Framework for Assessing the Socio-Ecological Performance of Systems Design
DOI: 10.6084/m9.figshare.26563836
title: Additional file 5 of Temporal transcriptomic changes in microRNAs involved in the host immune response and metabolism during Neospora caninum infection

description: Additional file 5: Data S5. The predicted target mRNAs for the DEmiRNAs.
DOI: 10.15468/dl.6bnh9d
title: Occurrence Download

description: A dataset containing 61501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Year 2024-2024"
 ]
}

 The dataset includes 61501 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065642-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26090746
title: Sulfur starvation-induced autophagy in Saccharomyces cerevisiae involves SAM-dependent signaling and transcription activator Met4

description: RT-qPCR, ChIP and Western blot analyses from wild-type and mutant strains of Saccharomyces cerevisiae subjected to sulfur deprivation.
DOI: 10.6084/m9.figshare.26090746.v1
title: Sulfur starvation-induced autophagy in Saccharomyces cerevisiae involves SAM-dependent signaling and transcription activator Met4

description: RT-qPCR, ChIP and Western blot analyses from wild-type and mutant strains of Saccharomyces cerevisiae subjected to sulfur deprivation.
DOI: 10.6084/m9.figshare.26587215.v1
title: Additional file 1 of Human-associated bacteria adopt an unusual route for synthesizing 3-acetylated tetramates for environmental adaptation

description: Additional file 1. Supplementary Tables, Supplementary Figures.
DOI: 10.6084/m9.figshare.25305217
title: The Critical dynamics of hippocampal seizures

description: Overview

This repository contains the code and some process data accompanying the manuscirpt "The critical dynamics of hippocampal seizures".

The code implements the methods described in the paper, allowing for replication of the analysis and plots presented.

The code is provided as Jupyter notebooks. Each Jupyter can be run independently from the others.

The "README_figures.md" file serves as index, linking the different panels presented in the paper to specific notebook.

Please note that while this repository includes some sample or processed data necessary for running the code and reproducing the results presented in the paper, it is not meant to be a comprehensive data repository. If you require access to the full, unprocessed dataset used in the research, please contact the authors directly.
Citation

If you use this code or find it helpful for your work, please cite our paper as ...
Authors

Lepeu, Gregory (In Vivo analysis)

Proix, Timothee (In Silico modeling)

van Maren, Ellen (Human data processing)

Baud, Maxime (Supervision)
Contact

For any questions, feedback, or inquiries regarding the code or the research, please contact Gregory Lepeu at lepeu.gregory@gmail.com
Depedencies

Python 3.11

dabest 0.3.1

matplotlib 3.7.1

mne 1.4.2

numpy 1.25.0

pandas 1.5.3

scikit-learn 1.3.0

scipy 1.11.1

seaborn 0.12.2

statsmodels 0.14.0
DOI: 10.6084/m9.figshare.25305217.v1
title: The Critical dynamics of hippocampal seizures

description: Overview

This repository contains the code and some process data accompanying the manuscirpt "The critical dynamics of hippocampal seizures".

The code implements the methods described in the paper, allowing for replication of the analysis and plots presented.

The code is provided as Jupyter notebooks. Each Jupyter can be run independently from the others.

The "README_figures.md" file serves as index, linking the different panels presented in the paper to specific notebook.

Please note that while this repository includes some sample or processed data necessary for running the code and reproducing the results presented in the paper, it is not meant to be a comprehensive data repository. If you require access to the full, unprocessed dataset used in the research, please contact the authors directly.
Citation

If you use this code or find it helpful for your work, please cite our paper as ...
Authors

Lepeu, Gregory (In Vivo analysis)

Proix, Timothee (In Silico modeling)

van Maren, Ellen (Human data processing)

Baud, Maxime (Supervision)
Contact

For any questions, feedback, or inquiries regarding the code or the research, please contact Gregory Lepeu at lepeu.gregory@gmail.com
Depedencies

Python 3.11

dabest 0.3.1

matplotlib 3.7.1

mne 1.4.2

numpy 1.25.0

pandas 1.5.3

scikit-learn 1.3.0

scipy 1.11.1

seaborn 0.12.2

statsmodels 0.14.0
DOI: 10.6084/m9.figshare.25906393.v1
title: Real-space imaging for discovering a rotated node structure in metal-organic framework

description: The dataset contains plotting data for all figures in manuscript.
DOI: 10.6084/m9.figshare.26641378
title: Additional file 3 of Assessing the causal effect of genetically predicted metabolites and metabolic pathways on stroke

description: Additional file 3: Table S1. The Results of all stroke phenotypes.
DOI: 10.6084/m9.figshare.26641378.v1
title: Additional file 3 of Assessing the causal effect of genetically predicted metabolites and metabolic pathways on stroke

description: Additional file 3: Table S1. The Results of all stroke phenotypes.
DOI: 10.13140/rg.2.2.11813.01768
title: biomolecules-11-00414-s001.pdf
DOI: 10.15468/gy5cmu
title: Données naturalistes opportunistes issues de la plateforme INaturalist-Données naturalistes opportunistes "rolandgodon"

description: Données naturalistes opportunistes saisies sur iNaturalist à partir du compte "rolandgodon"
DOI: 10.13140/rg.2.2.11514.82888
title: ((المؤتمر العلمي الدولي الثاني للبحث العلمي ودوره في خدمة المجتمع 2-4 نيسان/أبريل2021م)) https://www.iccspm.com/event-detail/3648825?utm_campaign=37477
DOI: 10.13140/rg.2.2.18592.71689
title: ‫والسيلينيوم‬ ‫د‬ ‫وفيتامين‬ ‫ج‬ ‫فيتامين‬ ‫دور‬ vitamins C.D and Selenium in covid 19 Professor tareq alasadi : ‬‬
DOI: 10.15468/dl.aqa0fk
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "HasCoordinate is true",
 "TaxonKey is Podocnemis expansa (Schweigger, 1812)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 1 records were derived from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015727-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-12.1906270/2365220
title: Data for EMSL Project 48666 from December 2019
DOI: 10.15468/dl.qy42rm
title: Occurrence Download

description: A dataset containing 2883 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Inventory of Antarctic seabird breeding sites"
 ]
}

 The dataset includes 2883 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039482-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.suxbnh
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Duhaldea wissmanniana (Hand.-Mazz.) Anderb."
 ]
}

 The dataset includes 25 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028042-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m2phk2
title: Occurrence Download

description: A dataset containing 8630 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apodemus agrarius (Pallas, 1771)",
 "Year 1970-2000"
 ]
}

 The dataset includes 8630 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049939-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-10.1859416/2365221
title: Data for EMSL Project 48666 from October 2019
DOI: 10.15468/dl.bdmm6m
title: Occurrence Download

description: A dataset containing 246 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dianthus micropetalus Ser."
 ]
}

 The dataset includes 246 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028038-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uiioms
title: Occurrence Download

description: A dataset containing 500 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "Year 1980-2019",
 "HasCoordinate is true",
 "InstitutionCode is instituto nacional de pesquisas da amazônia (inpa)",
 "TaxonKey is Podocnemis expansa (Schweigger, 1812)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 500 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015752-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-10.1859456/2365222
title: Data for EMSL Project 48666 from October 2019
DOI: 10.15468/dl.a3mgde
title: Occurrence Download

description: A dataset containing 1818 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-103.34247 18.2716,-103.34334 18.27151,-103.3439 18.27136,-103.3447 18.27121,-103.34541 18.27092,-103.34573 18.27067,-103.3461 18.27022,-103.3465 18.26984,-103.34681 18.2697,-103.34773 18.26905,-103.34785 18.26885,-103.3478 18.26863,-103.34703 18.26918,-103.3462 18.26982,-103.34555 18.27047,-103.34509 18.27075,-103.3442 18.27102,-103.34287 18.27118,-103.34161 18.27112,-103.34043 18.27096,-103.33936 18.27065,-103.33724 18.26995,-103.33623 18.26957,-103.33569 18.26942,-103.33488 18.26916,-103.33174 18.26805,-103.32958 18.26727,-103.3289 18.26686,-103.32723 18.26592,-103.32707 18.26621,-103.32734 18.26641,-103.32733 18.26673,-103.32921 18.26769,-103.33038 18.26822,-103.33074 18.26835,-103.3342 18.26956,-103.33432 18.26963,-103.33602 18.27017,-103.33611 18.26998,-103.33712 18.27037,-103.33901 18.27101,-103.34084 18.27156,-103.34247 18.2716))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1818 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049399-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m8ywmf
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Apristurus microps (Gilchrist, 1922)"
 ]
}

 The dataset includes 78 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028048-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ywd7pe
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Thermopsis lanceolata R.Br.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 164 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015744-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-10.1879526/2365223
title: Data for EMSL Project 48666 from October 2019
DOI: 10.15468/dl.3yvjj6
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-98.082 22.732,-98.059 22.732,-98.059 22.754,-98.082 22.754,-98.082 22.732))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049410-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-11.1882941/2365224
title: Data for EMSL Project 48666 from November 2019
DOI: 10.15468/dl.6rntp7
title: Occurrence Download

description: A dataset containing 10736 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arctozenus risso (Bonaparte, 1840)"
 ]
}

 The dataset includes 10736 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028067-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kz6i3c
title: Occurrence Download

description: A dataset containing 4761 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Tragus racemosus (L.) All.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4761 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015749-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-10.1878828/2365225
title: Data for EMSL Project 48666 from October 2019
DOI: 10.15468/dl.h6aspf
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "GadmGid is ESP.1.2_1",
 "TaxonKey is Abies pinsapo Boiss."
 ]
}

 The dataset includes 27 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049408-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngrniv
title: Occurrence Download

description: A dataset containing 6055 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Picea sitchensis (Bong.) Carrière",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation"
 ]
 },
 "HasCoordinate is true",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 6055 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015733-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2n6nd
title: Occurrence Download

description: A dataset containing 71828 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Dipterocarpaceae)"
 ]
}

 The dataset includes 71828 records from 283 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028235-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2020-01.1936348/2365226
title: Data for EMSL Project 48666 from January 2020
DOI: 10.15468/dl.85au2e
title: Occurrence Download

description: A dataset containing 24658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calliostoma zizyphinum (Linnaeus, 1758)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 24658 records from 175 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049401-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-11.1883938/2365227
title: Data for EMSL Project 48666 from November 2019
DOI: 10.15468/dl.5lmwec
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tugarinovia mongolica Iljin"
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015753-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ed995
title: Occurrence Download

description: A dataset containing 2094 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Hemitriccus furcatus (Lafresnaye, 1846)"
 ]
}

 The dataset includes 2094 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028018-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-10.1879133/2365228
title: Data for EMSL Project 48666 from October 2019
DOI: 10.15468/dl.6w8eqw
title: Occurrence Download

description: A dataset containing 6704 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dorycnopsis gerardi (L.) Boiss."
 ]
}

 The dataset includes 6704 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049947-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fioc2h
title: Occurrence Download

description: A dataset containing 39164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "Country is Botswana"
 ]
}

 The dataset includes 39164 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010360-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-10.1875045/2365229
title: Data for EMSL Project 48666 from October 2019
DOI: 10.15468/dl.52t5q5
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dombeya amaniensis Engl."
 ]
}

 The dataset includes 37 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028021-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fwq3nk
title: Occurrence Download

description: A dataset containing 636115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is RBINS DaRWIN"
 ]
}

 The dataset includes 636115 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017699-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2019-06.1790080/2365230
title: Data for EMSL Project 48666 from June 2019
DOI: 10.15468/dl.hepmei
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 {
 "or" : [
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate rounded"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Podocnemis expansa (Schweigger, 1812)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 1 records were derived from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015731-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.