cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc20m2mc
title: CCDC 1865382: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.7284/127794
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise SAV-17-03 using a Sea-Bird SBE-25 instrument system onboard the platform RV Savannah

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.5161/steel/2018/sg18001
title: Weldability of conventional high manganese steel and ladle treatment one

description: ISSN 1611-4442
DOI: 10.5281/zenodo.1408264
title: Zhao-2019-9-3

description: data for my publication
DOI: 10.5281/zenodo.1408265
title: Zhao-2019-9-3

description: data for my publication
DOI: 10.15129/2bbce19a-4b47-43d9-b9d5-7549b4d9ae4a
title: Data for: "Self-assembling silk hydrogels as a mesenchymal stem cell support matrix for stroke"

description: Biomaterials such as silk which has self-assembling properties, is biocompatible and biodegradable show promise for improving stem cell delivery and retention for treatment of stroke. The present aims were to assess the capacity of self-assembling silk hydrogels to improve stem cell delivery in vitro and in an in vivo stroke model. 

Data formats: pzf Prism, Excel, images in JPJ and powerpoint
DOI: 10.17632/s6dvtkb48t.3
title: Association of cognitive function and serum BDNF levels in euthymic bipolar disorder patients treated with rTMS

description: We hypothesized that rTMS could improve the cognitive function and increase the serum BDNF levels in the active group as compared to the sham group. We also examined the correlation between serum BDNF levels and cognitive function.The document included general data from the subjects, Hamilton Depression Rating Scale (HDRS), the Young Mania Rating Scale (YMRS), the MATRICS Consensus Cognitive Battery (MCCB), and the brain-derived neurotrophic factor (BDNF). T test and χ2-squared test were performed to investigate demographic, baseline clinical variables and 2-weeks follow-up clinical variables between the rTMS group and the control group. Repeated measures ANOVA (RMANOVA) was used to test the significance of cognitive tests and serum BDNF levels. Pearson correlation analyses were performed to examine the relationship of serum levels of BDNF and cognitive variables, HDRS and YMRS scores. The threshold for significance was set at p&lt;0.05. All statistical analyses were conducted using SPSS 21.0. These findings indicated that rTMS could improve working memory and reasoning and problem solving in patients with BD. Moreover, the cognitive benefits may be positively associated with the changes of BDNF levels in euthymic BD patients after rTMS.
DOI: 10.17632/85r8wgk47r.1
title: Data set on the kinetics of oil extraction from algae.

description: The data set on the kinetics of oil extraction from microalgae (Chlorella Sp.) obtained in Landmark University commercial fish pond Omu-Aran, Kwara State. Algae biomass characterized using the photometer and Fourier transform infrared spectroscopy (FTIR) were presented in the data set. Oil from the algae was extracted using the Chemical method Extraction (N-hexane) with Soxhlet extractor unit.
DOI: 10.17632/s6dvtkb48t.4
title: Association of cognitive function and serum BDNF levels in euthymic bipolar disorder patients treated with rTMS

description: We hypothesized that rTMS could improve the cognitive function and increase the serum BDNF levels in the active group as compared to the sham group. We also examined the correlation between serum BDNF levels and cognitive function.The document included general data from the subjects, Hamilton Depression Rating Scale (HDRS), the Young Mania Rating Scale (YMRS), the MATRICS Consensus Cognitive Battery (MCCB), and the brain-derived neurotrophic factor (BDNF). T test and χ2-squared test were performed to investigate demographic, baseline clinical variables and 2-weeks follow-up clinical variables between the rTMS group and the control group. Repeated measures ANOVA (RMANOVA) was used to test the significance of cognitive tests and serum BDNF levels. Pearson correlation analyses were performed to examine the relationship of serum levels of BDNF and cognitive variables, HDRS and YMRS scores. The threshold for significance was set at p&lt;0.05. All statistical analyses were conducted using SPSS 21.0. These findings indicated that rTMS could improve working memory and reasoning and problem solving in patients with BD. Moreover, the cognitive benefits may be positively associated with the changes of BDNF levels in euthymic BD patients after rTMS.
DOI: 10.17632/67t9s63nby.1
title: MAGNATE

description: i) Current version of MAGNATE Matlab version (beta, 18 June 2018) ii) 3D Oneshot-HSQC data for mixture of B vitamins (MAGNATE format) iii) NMR data for mixture of B vitamins (BRUKER format) Folder - Experiment 1 - 1H 2 - {1H}13C 3 - 2D Echo/Antiecho-HSQC with spectrum aliasing 4 - 2D DOSY-Oneshot45 8 - 3D Oneshot-HSQC with spectrum aliasing iv) NMR data for mixture of rutin and quercetin (BRUKER format) Folder - Experiment 1 - 1H 2 - {1H}13C 3 - 2D EA-HSQC with spectrum aliasing 4 - 3D Oneshot-HSQC with spectrum aliasing v) 3D Oneshot-HSQC pulse sequence (BRUKER)
DOI: 10.17632/bvkdw8f5j2.1
title: Oncoplastic breast surgery Dottorato di Ricerca dataset

description: History, surgery and developing techniques in oncoplastic breast reconstruction.
DOI: 10.17632/swnhc9sy89.1
title: VIX data US and ASIA

description: Daily Closing values of Volatility Index (VIX) of the U.S. , Hong Kong, Japan and India. The data is obtained from the official websites of the U.S., Japan and Indian official exchanges and for Hong Kong from Bloomberg data base. Vol
DOI: 10.6073/pasta/4f8ff6a2c63a2cd110b8769b35a4debb
title: Physical and Chemical Characteristics of Soil Sediments from the Shark River Slough and Taylor Slough, Everglades National Park (FCE) from August 2004 to Present

description: These data represent the results of soil sampling and analysis from all 17 FCE LTER transect locations during from Year 2004 thru Year 2017.  Surface soils from 0-10 cm been homogenized and analyzed from Sawgrass and mangrove sites and Florida Bay sites.  Soils and sediments were analyzed for a suite of physical/chemical variables, including bulk density, organic matter content, extractable iron, AVS and CRS sulfur, and various forms of extractable phosphorus.  These analyses are completed to document the differences in soil structure among transect sites, and to provide a baseline dataset against which long-term changes in the physical/chemical properties of the soils can be detected.
DOI: 10.6073/pasta/f49a301a827ddac3a13d841b4277866e
title: Physical and Chemical Characteristics of Soil Sediments from the Shark River Slough and Taylor Slough, Everglades National Park (FCE) from August 2004 to Present

description: These data represent the results of soil sampling and analysis from all 17 FCE LTER transect locations during from Year 2004 thru Year 2017.  Surface soils from 0-10 cm been homogenized and analyzed from Sawgrass and mangrove sites and Florida Bay sites.  Soils and sediments were analyzed for a suite of physical/chemical variables, including bulk density, organic matter content, extractable iron, AVS and CRS sulfur, and various forms of extractable phosphorus.  These analyses are completed to document the differences in soil structure among transect sites, and to provide a baseline dataset against which long-term changes in the physical/chemical properties of the soils can be detected.
DOI: 10.7910/dvn/yojqzi
title: Database creation through if, vlookup, sum and sumif functions of Microsoft Excel
DOI: 10.7910/dvn/yojqzi/kv0h54
title: 3.pdf
DOI: 10.17632/8pz43nvvxh.2
title: MHCflurry: open-source class I MHC binding affinity prediction

description: Predicting the binding affinity of major histocompatibility complex I (MHC I) proteins and their peptide ligands is important for vaccine design. We introduce an open-source package for MHC I binding prediction, MHCflurry. The software implements allele-specific neural networks that use a novel architecture and peptide encoding scheme. When trained on affinity measurements, MHCflurry outperformed the standard predictors NetMHC 4.0 and NetMHCpan 3.0 overall and particularly on non-9-mer peptides in a benchmark of ligands identified by mass spectrometry. The released predictor, MHCflurry 1.2.0, uses mass spectrometry datasets for model selection and showed competitive accuracy with standard tools, including the recently released NetMHCpan 4.0, on a small benchmark of affinity measurements. MHCflurry’s prediction speed exceeded 7,000 predictions per second, 396 times faster than NetMHCpan 4.0. MHCflurry is freely available to use, retrain, or extend, includes Python library and command line interfaces, may be installed using package managers, and applies software development best practices. DEPOSITED DATA ---------------------- * Curated training and model selection dataset: data_curated.20180219.tar.bz2 , derived from IEDB and other sources * MS benchmark dataset: abelin_peptides.mhcflurry_no_mass_spec.csv.bz2 , derived from Abelin et al. Immunity 2017. * MHCflurry 1.2.0 models: models_class1.20180225.tar.bz2 * MHCflurry (no MS) models: models_class1_selected_no_mass_spec.20180225.tar.bz2 * MHCflurry (train-MS) models: models_class1_trained_with_mass_spec.20180228.tar.bz2 See also: https://github.com/openvax/mhcflurry/ UPDATES ---------------------- * Version 2: The abelin_peptides.all_predictions.csv.bz2 given in Version 1 corresponded to an earlier preprint of the MHCflurry paper, not the final version published in Cell Systems. This file has been replaced with abelin_peptides.mhcflurry_no_mass_spec.csv.bz2, which gives the predictions analyzed in the Cell Systems paper.
DOI: 10.17632/gm6kwj8xvz.1
title: The Study of mTORC1-regulated and HUWE1-mediated WIPI2 degradation controls autophagy flux. Wan et al

description: The original imaging data of the Study of mTORC1-regulated and HUWE1-mediated WIPI2 degradation controls autophagy flux. Wan et al.
DOI: 10.17632/kxw9c8jf6c.1
title: Comparative studies on the structure and properties of rapidly solidified and conventionally cast AM60 magnesium alloys

description: Data for: "Comparative studies on the structure and properties of rapidly solidified and conventionally cast AM60 magnesium alloys" The data represent mechanical properties of AM60 alloy produced by conventional casting (AM60 IM alloy) and rapid solidification technique (AM60 RS alloy). The flow stress of rapidly solidified and conventionally cast AM60 magnesium alloy has been investigated under conditions of uniaxial tension and compression at 4 K, 78 K and 298 K.
DOI: 10.17632/rtd9dnz5k5.5
title: Results of the comparative chemical analysis of the rind and pith of totora (Schoenoplectus californicus (C.A. Mey.) Soják) stems

description: The research hypothesis is that the chemical characteristics of the rind and pith of totora stems are different. These differences have not been reported elsewhere. The data is a spreadsheet that includes the results of the chemical analysis conducted to test the hypothesis that was proven true, and the standards used in each case.
DOI: 10.3886/e105700v1-8161
title: Replication Files - "In the Shadow of the Mushroom Cloud: Nuclear Testing, Radioactive Fallout and Damage to U.S. Agriculture, 1945 to 1970"

description: Included are replication files for the Journal of Economic History manuscript titled "In the Shadow of the Mushroom Cloud: Nuclear Testing, Radioactive Fallout and Damage to U.S. Agriculture, 1945 to 1970." This paper studies the adverse effects radioactive fallout from atmospheric nuclear testing had on crop yields and livestock populations in the United States.<br><br>The project was written in STATA as part of my dissertation and the data was gathered from a myriad of sources. Unzip the files to a directory and replication requires that only the working directory be changed in the .DO files.<br>
description: Smallest Geographic Unit: County
DOI: 10.17632/cc798dvdbn.2
title: Raw data of DEM simulation of linear motion double deck vibrating screen

description: This data set include raw data of a discrete element simulation of a linear motion double deck vibrating screen using open-source LIGGGHTS software. The folder Paraview Data contains .vtk files to import in a post-processing software, as Paraview, and visualize the particle motion at every time step. Files with .stl extension are meshes. The plain text files s6_data.dat, s6_fuerza_malla_sup.dat and s6_fuerza_malla_inf.dat contains tabular data of every time step of total mass of particles and the force of the particles over the screen deck.
DOI: 10.17632/ddxtvjjfdk.3
title: Data for "Mechanical characterization and strain-rate sensitivity measurement by nanoindentation and crystal plasticity finite element modeling: Application to Ti-7Mo-3Nb-3Cr-3Al near β titanium alloy"

description: the supporting data for paper entitled 'Mechanical characterization and strain-rate sensitivity measurement by nanoindentation and crystal plasticity finite element modeling: Application to Ti-7Mo-3Nb-3Cr-3Al near β titanium alloy'
DOI: 10.17632/k4m628mm5r.1
title: Empirical data from China to examine which kinds of risk perception play key role in the relationship between community participation and protective action in the context of hazardous chemicals.

description: Based on the data, we examined the role of risk perception in the relationship between community participation and protective action in the context of hazardous chemicals. The data file contains raw data collected by online platform in the year of 2017. 1700 questionnaires was collected from six cities in china where has typical characteristics of hazardous chemicals accidents, such as Zhangzhou, Zibo, Lanzhou, Changzhou, Chongqing, and Tianjin. The data include (1) the performance of demographic characteristics, include sex, age, marital status, etc. (2) the characteristics of public community participation, risk perception and protective action intention.
DOI: 10.7910/dvn/ojbz67/1oonoo
title: AnalyzePTT_deshape.m
DOI: 10.7910/dvn/ojbz67/f3o2bv
title: AllSignalFigurePS.pdf
DOI: 10.7910/dvn/ojbz67/xdrfgd
title: PTT_deShapeSTFT.pdf
DOI: 10.7910/dvn/ojbz67/xwwmwk
title: AllSignalFigure.pdf
DOI: 10.17632/g73g7ynwr5.1
title: turbulent combustion speed of internal combustion engines

description: The thermodinamic model to obtain the turbulent combustion speed (together with the geometrical model) is presented in a pdf file. The results of the quasidemensinal model is presented in an excell file.
DOI: 10.17632/rh9mx7fh7b.1
title: MEFF-MEditerranean Flood Fatalities

description: In the Mediterranean environment, floods pose a significant threat to people, in spite of the noteworthy improvements in forecasting, emergency management, and defensive works. This paper examines flood mortality in the Mediterranean environment based on a 36-year long database (1980–2015) that was built in five study areas using documentary sources. Information on fatal accidents was disaggregated in database fields describing victim's profile and the circumstances of the accidents. Data show an increasing trend of flood fatalities during the study period. Accidents mainly occurred outdoor: the majority of the 458 fatalities were males, mainly aged between 30 and 49 years, and residents in the area of the accident. In the majority of cases, people were dragged by water/mud when travelling by car. Some cases of hazardous behaviours, such as fording rivers or trying to save belongings, were also detected. The cause of death was drowning in the majority of cases, and heart attack in a few cases it was. The results of the research can be proficiently used in information campaigns aiming to increase people safety during future floods. To use these data, quote the paper: Petrucci, O., Papagiannaki, K., Aceto, L., Boissier, L., Kotroni, V., Grimalt, M., Llasat M.C., Llasat‐Botija M., Rosselló J., Pasqua A.A., Vinet, F. MEFF: the database of MEditerranean Flood Fatalities (1980 to 2015). Journal of Flood Risk Management, 2018; e12461. wileyonlinelibrary.com/journal/jfr3, https://doi.org/10.1111/jfr3.12461.
DOI: 10.17632/xf4k25cnpk.1
title: The Chandrasekhar function for modeling photoelectron transport in solids

description: The objective of this study was to design an algorithm for calculating the Chandrasekhar function (H-function) dedicated for theoretical models of photoelectron transport in condensed matter. It has been shown that only the H-function values for non-conservative isotropic scattering are needed with the largest albedo, w, values reaching 0.85. Different algorithms for calculating the H-function were analyzed to identify values of arguments for which an accuracy of 14 decimals is reached. It turned out that the most universal approach was an algorithm implementing the double-exponential rule which provided accurate values of the H-function for arguments varying over 10 orders of magnitude. However, the execution time was found to be shorter for algorithms implementing approximate analytical expressions in the region of small argument values, and the Stibbs and Weir algorithm (Stibbs and Weir, 1959) in the region of largest albedo values considered here. Based on these results, a mixed algorithm was created, and tested in calculations of integrals with integrands containing the H-function that are needed in the formalism for photoelectron transport. The execution time of calculations of the photoelectron current emitted from a solid or the photoelectron mean escape depth usually was very short, well below 1 s despite the fact that several such integrals were calculated, and the desired and attained accuracy was 13 decimals or better.
DOI: 10.5281/zenodo.1409805
title: Jeu Fastoche HAL

description: Ce jeu de plateau pédagogique a été créé au sein du SCD de l’Université de Guyane par Marie Latour et Caroline Boiteux afin de permettre aux joueurs l’appropriation des grandes notions de l’Open Access, et d’ouvrir le débat sur les enjeux de celui-ci. Pour cela, les joueurs sont invités à réfléchir sur le fonctionnement de l’archive ouverte HAL, et sont initiés aux grandes étapes d’un dépôt avec la présentation des principaux types de métadonnées à remplir.

Ce jeu a été présenté pour la première fois lors de l’Open Access Week 2016 qui a été organisé à Cayenne par la BU, avec le concours financier de COUPERIN. Pour cet évènement, un graphiste, Jordy le Bruchec (Société Signarama, Cayenne) a été embauché afin de créer les visuels. Deux séances d’animation ont été effectuées à Cayenne auprès des doctorants de l’École doctorale « Diversités, santé et développement en Amazonie » (Université de Guyane). Ce jeu a ensuite été intégré à la formation doctorale proposée chaque année par le SCD de l’Université de Guyane à ses doctorants. D’autres écoles et universités l’ont par la suite repris et adapté à destination de leurs évènements et de leur formations propres : la Bibliothèque « Marie Curie » de l’INSA Lyon, l’Université Claude Bernard (Lyon 1), etc.

Le SCD de l’Université de Guyane vous offre la possibilité de télécharger l’intégralité du jeu afin de l’utiliser librement et gratuitement dans vos établissements. Celui-ci est placé sous la licence Creative Commons BY NC SA, qui permet sa libre réutilisation dans les conditions où les auteurs sont cités et où aucune utilisation commerciale n’en est faite. Il est possible d’effectuer des modifications sur le jeu : cependant toutes celles-ci doivent être exclusivement partagées dans la même licence que celle sous laquelle le jeu a été initialement placé. Nous attirons votre attention sur le fait que le retrait des logos de l’Université de Guyane sur les cartes est absolument interdit.
DOI: 10.5281/zenodo.1409806
title: Jeu Fastoche HAL

description: Ce jeu de plateau pédagogique a été créé au sein du SCD de l’Université de Guyane par Marie Latour et Caroline Boiteux afin de permettre aux joueurs l’appropriation des grandes notions de l’Open Access, et d’ouvrir le débat sur les enjeux de celui-ci. Pour cela, les joueurs sont invités à réfléchir sur le fonctionnement de l’archive ouverte HAL, et sont initiés aux grandes étapes d’un dépôt avec la présentation des principaux types de métadonnées à remplir.

Ce jeu a été présenté pour la première fois lors de l’Open Access Week 2016 qui a été organisé à Cayenne par la BU, avec le concours financier de COUPERIN. Pour cet évènement, un graphiste, Jordy le Bruchec (Société Signarama, Cayenne) a été embauché afin de créer les visuels. Deux séances d’animation ont été effectuées à Cayenne auprès des doctorants de l’École doctorale « Diversités, santé et développement en Amazonie » (Université de Guyane). Ce jeu a ensuite été intégré à la formation doctorale proposée chaque année par le SCD de l’Université de Guyane à ses doctorants. D’autres écoles et universités l’ont par la suite repris et adapté à destination de leurs évènements et de leur formations propres : la Bibliothèque « Marie Curie » de l’INSA Lyon, l’Université Claude Bernard (Lyon 1), etc.

Le SCD de l’Université de Guyane vous offre la possibilité de télécharger l’intégralité du jeu afin de l’utiliser librement et gratuitement dans vos établissements. Celui-ci est placé sous la licence Creative Commons BY NC SA, qui permet sa libre réutilisation dans les conditions où les auteurs sont cités et où aucune utilisation commerciale n’en est faite. Il est possible d’effectuer des modifications sur le jeu : cependant toutes celles-ci doivent être exclusivement partagées dans la même licence que celle sous laquelle le jeu a été initialement placé. Nous attirons votre attention sur le fait que le retrait des logos de l’Université de Guyane sur les cartes est absolument interdit.
DOI: 10.5517/ccdc.csd.cc1pppmp
title: CCDC 1569983: Experimental Crystal Structure Determination

description: Related Article: Malgorzata T. Kaczmarek, Monika Skrobanska, Michal Zabiszak, Monika Wałęsa-Chorab, Maciej Kubicki, Renata Jastrzab|2018|RSC Advances|8|30994|doi:10.1039/C8RA03565B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pppnq
title: CCDC 1569984: Experimental Crystal Structure Determination

description: Related Article: Malgorzata T. Kaczmarek, Monika Skrobanska, Michal Zabiszak, Monika Wałęsa-Chorab, Maciej Kubicki, Renata Jastrzab|2018|RSC Advances|8|30994|doi:10.1039/C8RA03565B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.