cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6626549
title: Reference dataset for sea ice concentration

description: 20211111: The dataset has been augmented with SIC0 (open water) and SIC1 (total ice cover) data from 2016-2019. Version 3 constitutes the entire v2.2.1 dataset and these new 2016-19 files.20190305: The 20190305 update (2.2.1) includes some updated CRREL-IMB based datafiles replacing a few empty files in the 20190207 version (2.2).20190207: Note that there was a bug in our reading of the accumulated ERA-I fields in the original dataset. For time series analysis (CRREL-IMB and OIB-backtrack), please use the ERAreruns dataset now also available here.In version 2.2 (2019-02-07) of the dataset and manual, this issue has been described and corrected. We recommend that all users use version 2.2. <br>The RRDP is a set of comma separated ASCII files which contain reference sea ice concentrations and/or other relevant data and co-located NWP data from ERA-Interim, satellite Brightness Temperatures (TBs) extracted from the AMSR-E/AMSR2 swath datasets, ASCAT, QuikSCAT, SMOS and SMAP data to be used to for ice concentration calculations and evaluations. The dataset is easy to use by reading the files line by line, calculate Sea Ice Concentration from the given TBs and compare with the given reference SIC. Please read the included manual for additional information
DOI: 10.15468/vvqcyr
title: A New Species of Peropteryx (Chiroptera: Emballonuridae) from Western Amazonia with Comments on Phylogenetic Relationships within the Genus

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lim, Burton K., Engstrom, Mark D., Reid, Fiona A., Simmons, Nancy B., Voss, Robert S., Fleck, David W. (2010): A New Species of Peropteryx (Chiroptera: Emballonuridae) from Western Amazonia with Comments on Phylogenetic Relationships within the Genus. American Museum Novitates 3686: 1-20, DOI: 10.1206/691.1, URL: http://www.bioone.org/doi/abs/10.1206/691.1
DOI: 10.5281/zenodo.5675601
title: DF1

description: Supporting datafile DF1.csv This file provides all experimental data associated with paper: Matrix gas flow through ‘impermeable’ rocks - shales and tight sandstone , by Ernest Rutter, Julian Mecklenburgh and Yusuf Bashir
DOI: 10.26207/gy08-g120
title: Dataset for Monitoring Emerging Contaminants in Wastewater Impacted Vernal Pools Using Integrative and Grab Sampling
DOI: 10.15468/b7yahw
title: Fossil turtles from the early Miocene localities of Mokrá-Quarry (Burdigalian, MN 4), South Moravian Region, Czech Republic

description: This dataset contains the digitized treatments in Plazi based on the original journal article Luján, Àngel H., Čerňanský, Andrej, Bonilla-Salomón, Isaac, Březina, Jakub, Ivanov, Martin (2021): Fossil turtles from the early Miocene localities of Mokrá-Quarry (Burdigalian, MN 4), South Moravian Region, Czech Republic. Geodiversitas 43 (20): 691-707, DOI: 10.5252/geodiversitas2021v43a20
DOI: 10.15128/r18c97kq420
title: Re-ID-AR: Improved Person Re-identification in Video via Joint Weakly Supervised Action Recognition [dataset]

description: We uniquely consider the task of joint person re-identification (Re-ID) and action recognition in video as a multi-task problem. In addition to the broader potential of joint Re-ID and action recognition within the context of automated multi-camera surveillance, we show that the consideration of action recognition in addition to Re-ID results in a model that learns discriminative feature representations that both improve Re-ID performance and are capable of providing viable per-view (clip-wise) action recognition. Our approach uses a single 2D Convolutional Neural Network (CNN) architecture comprising a common ResNet50-IBN backbone CNN architecture, to extract frame-level features with subsequent temporal attention for clip-level feature extraction, followed by two subbranches:- the IDentification (sub-)Network (IDN) for person Re-ID and the ActionRecognition (sub-)Network for per-view action recognition. The IDN comprises a single fully connected layer while the ARN comprises multiple attention blocks on a one-to-one ratio with the number of actions to be recognised. This is subsequently trained as a jointRe-ID and action recognition task using a combination of two task-specific, multi-loss terms via weakly labelled actions obtained over two leading benchmark Re-ID datasets (MARS & LPW). Our consideration of Re-ID and action recognition as a multi-task problem results in a multi-branch 2D CNN architecture that outperforms prior work in the field (rank-1 (mAP) – MARS: 93.21%(87.23%), LPW: 79.60%) without any reliance 3D convolutions or multi-stream networks architectures as found in other contemporary work. Our work represents the first benchmark performance for such a joint Re-ID and action recognition video understanding task, hitherto unapproached in the literature, and is accompanied by a new public dataset of supplementary action labels for the seminal MARS and LPW Re-ID datasets.
DOI: 10.34892/g54r-gx47
title: Overlapping hotspots of depletion of stocks of natural capital assets (atmosphere, water, soil and sediments, biodiversity) in terrestrial environments

description: Overlapping hotspots of depletion of stocks of natural capital asssets (atmosphere, water, soil and sediments, biodiversity) in terrestrial environments, as defined by the top 20% values of their respective depletion rates. The overlapping hotspots of natural capital depletion enable the identification of areas where human activities will be associated with higher risks of ecosystem service loss or degradation. This will, in turn, present higher risks for financial institutions investing in these areas.

The top 20% of values were extracted from each of the 4 single-asset depletion layers (atmosphere, water, soil and sediments, biodiversity) by using the 'Slice' tool in ArcGIS Pro with 5 output zones of equal area, and then reassigning the value of the highest slice to 1 and the other 4 slices to 0. The resulting 4 layers were summed to produce the combined hotspots layer.

Atmosphere: GISS Surface temperature analysis data used for temperature anomalies (https://data.giss.nasa.gov/gistemp/) and EC JRC EDGAR data for non-GHG emissions (https://edgar.jrc.ec.europa.eu/overview.php?v=50_AP). Water: WRI Aqueduct 2019 data (https://www.wri.org/applications/aqueduct/water-risk-atlas/). Soil and sediments: Global Soil Erosion from EC JRC (https://esdac.jrc.ec.europa.eu/content/global-soil-erosion), Global Soil salinity change from Ivushkin et al (2019) (https://data.isric.org) and Soil Organic Carbon Stocks from Soils Revealed (https://soilsrevealed.org/). Biodiversity: Biodiversity Intactness Index (https://data.nhm.ac.uk/dataset/global-map-of-the-biodiversity-intactness-index-from-newbold-et-al-2016-science).
DOI: 10.15468/6aqzg4
title: Hidden diversity within the Nemastoma bidentatum Roewer, 1914 complex (Opiliones: Nemastomatidae) Part I: Morphological evidence

description: This dataset contains the digitized treatments in Plazi based on the original journal article Novak, Tone, Novak, Ljuba Slana, Kozel, Peter, Schaider, Miriam Gudrun, Komposch, Christian, Lipovšek, Saška, Podlesnik, Jan, Paušič, Igor, Raspotnig, Günther (2021): Hidden diversity within the Nemastoma bidentatum Roewer, 1914 complex (Opiliones: Nemastomatidae) Part I: Morphological evidence. European Journal of Taxonomy 777: 1-67, DOI: https://doi.org/10.5852/ejt.2021.777.1561
DOI: 10.15468/zm8dc5
title: Review of the genus Sessiluncus (Acari: Mesostigmata: Ologamasidae), description of male and redescription of female of Sessiluncus aegypticus, and notes on some morphological characters of the genus

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kazemi, Shahrooz, Nasr, Abdelrady Korashy, Ramadan, Mahmoud Mohamed, Klompen, Hans (2021): Review of the genus Sessiluncus (Acari: Mesostigmata: Ologamasidae), description of male and redescription of female of Sessiluncus aegypticus, and notes on some morphological characters of the genus. Zootaxa 5061 (2): 271-299, DOI: https://doi.org/10.11646/zootaxa.5061.2.3
DOI: 10.6084/m9.figshare.16943812.v1
title: Data&ScriptsFigure3

description: Data and scripts to generate Figure 3<br>
DOI: 10.23728/fmi-b2share.752699d19f34489bbdaead7e7c591e27
title: Data for Raatikainen et al. (2021): The effect of marine ice-nucleating particles on mixed-phase clouds

description: UCLALES-SALSA model outputs focusing on the effect marine ice-nucleating particle (INP) emissions on mixed-phase clouds.
description: UCLALES-SALSA is available from GitHub: https://github.com/UCLALES-SALSA/UCLALES-SALSA. These simulations are made with branch "isdac_poa" (last updated Wed Mar 3 14:59:05 2021), which is available from https://github.com/UCLALES-SALSA/UCLALES-SALSA/tree/isdac_poa. 3D outputs were merged using post-processing code ../script/combine.f90. The model and the post-processing code were compiled using Fortran, and simulations were made with 64 PUs. Template NAMELISTs and soundings can be found from inputs.zip.
description: File isdac2021.zip contains all model outputs files compressed into a single zip file. File inputs.zip contains the model input files compressed into a single zip file. File readme.txt contains a brief explanation of the simulations and calculations used to produce the figures for the publication.
description: UCLALES-SALSA outputs are NetCDF files, which contain several variables. Variables are described with their long name and unit. Three types of ouput files are produced from each simulation: 1) Time series, which are averaged/integrated over domain (*.ts.nc) 2) Profiles, which are averaged over horizontal dimensions (*.ps.nc) 3) Analysis outputs, which are 3D snapshots of the domain (e.g., isdac_s0b0.nc and isdac_s0b2.nc)
DOI: 10.34740/kaggle/dsv/2799621
title: COVID Vaccination in World (updated daily)
DOI: 10.15468/pwt675
title: Reinstatement of Athis miastagma (Dyar, 1925) (Lepidoptera: Castniidae) as a valid species inhabiting the Pacific slope of Central Mexico

description: This dataset contains the digitized treatments in Plazi based on the original journal article González, Jorge M., López, Bernardo, Díaz, José De Jesús García, Simon, Sabrina, Sarto, Víctor, Worthy, Robert (2021): Reinstatement of Athis miastagma (Dyar, 1925) (Lepidoptera: Castniidae) as a valid species inhabiting the Pacific slope of Central Mexico. Zootaxa 5061 (2): 300-322, DOI: https://doi.org/10.11646/zootaxa.5061.2.4
DOI: 10.5281/zenodo.5675685
title: Dynamic rupture simulation of the 1833 Songming, Yunnan, China, M 8.0 earthquake: Effects from stepover location and overlap distance

description: This datasets accompany the western Xiaojiang fault surface coordinates that were used for construction of the fault geometry model and the observational fault surface slip of the 1833 Songming M 8.0 earthquake in Dynamic rupture simulation of the 1833 Songming, Yunnan, China, M 8.0 earthquake: Effects from stepover location and overlap distance submitted to <em>Earth and Space Science </em>by Yu et al. (2021). The data is structured as follows: Once unzipped the data within the archive are two folders structured as follows: subfolder "fault_coordinates" is for the western Xiaojiang fault surface coordinates and "fault_slip" is for the observational fault surface slip. Inside the first folder, there are three txt files, "wxj_conti.txt" is for the continuous western Xiaojiang fault model, "wxj_qshso.txt" is for the western Xiaojiang fault model with Qingshuihai stepover structure, and "wxj_yzhso.tx" is for the western Xiaojiang fault model with Qingshuihai and Yangzonghai stepover structures. Inside the second folder, there is one txt file, 'fault_surface_slip.txt' is for the observational fault surface slip of the 1833 Songming earthquake with the observational location.
DOI: 10.15468/kpa7wz
title: Cybister (s. str.) poblanus sp. n. from Mexico and notes on other species of Cybistrinae (Coleoptera: Dytiscidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Arce-Pérez, Roberto, Novelo-Gutiérrez, Rodolfo, Fery, Hans (2021): Cybister (s. str.) poblanus sp. n. from Mexico and notes on other species of Cybistrinae (Coleoptera: Dytiscidae). Zootaxa 5061 (2): 323-339, DOI: https://doi.org/10.11646/zootaxa.5061.2.5
DOI: 10.14457/tu.the.2020.516
title: Solid-liquid lipid mixtures study by coarse-grained molecular dynamics simulations

description: Solid Lipid nanoparticle is a very important carrier in the drug delivery system. It was developed in early 1990s as an alternative to other traditional colloidal carriers like liposomes, polymeric nanoparticles and emulsions as it has an increased stability. It is formulated based on the mixture of lipids. However, the mixture of lipids must be carefully chosen to ensure the stability and the good mixing between different lipids. To understand the stability and the structure of lipid nanoparticles, binary mixtures of solid-liquid lipids will be modeled using coarse-grained molecular dynamics simulations to investigate their phase separation behaviors as a function of lipid types and solid-liquid lipid ratios. We will use stearic acid (STA) and cetyl palmitate (CTP) as solid lipids. Oleic acid (OLA) and isopropyl palmitate (IPP) will be selected as liquid lipids. Aggregation of binary lipid mixtures will be studied by varying ratios of solid lipid and liquid lipid starting from the lipid molecules dispersed randomly in water. The structural properties of the lipid aggregates such as the radial distribution function and the density profile, will be calculated. The analysis of simulation data should provide a guideline for selecting a pair of solid-liquid lipids for a stable lipid nanoparticles formulation.
DOI: 10.14457/tu.the.2020.517
title: Bio-renewable supercapacitor with improved performance based on rice wastes-derived carbon dots and activated carbon and rice-based electrolyte

description: A high-performance energy storage device fabricated from readily available, abundant resources is highly desirable for large-scale and low-cost electronic applications. In this work, an environmentally friendly carbohydrate-based supercapacitor with a high energy density was developed from bio-renewable rice and rice wastes. Specifically, both activated carbon and carbon dots were prepared together from rice straw and rice husk. The obtained activated carbon was used to make an electrode while the carbon dots were combined with (i) bio-renewable rice for the preparation of electrolytes and (ii) activated carbon for the preparation of CDs-reinforce activated carbon electrode. The fabricated supercapacitor using rice straw-derived activated carbon (RSAC) in rice electrolyte yielded a specific capacitance, potential window, and energy density of 88 F g-1, 2 V, and 12 Wh kg-1, respectively, at a scan rate of 30 mV s-1. For the first time in supercapacitor, the addition of rice straw carbon dots (RSCDs) to rice electrolytes further increased the specific capacitance, potential window, and energy density are 144 F g-1, 2.4 V, and 29 Wh kg-1, equivalent to 163, 120, and 241% increases, respectively, at the same scan rate. The highest specific capacitance and energy density obtained in this work were 491 F g-1 and 98 Wh kg-1 at a scan rate of 2 mV s-1. As a comparison, electrolyte prepared from a conventional poly(vinyl alcohol) yielded only 45 F g-1, 1.6 V, and 4 Wh kg-1. The rice husk-derived activated carbon (RHAC) and carbon dots (RHCDs) were used to fabricate CDs-reinforce activated carbon electrode. The RHAC/RHCDs electrode displayed a higher specific capacitance of 129 F g-1 and energy density of 4.8 Wh kg-1 when compared with those of the bare AC electrode (specific capacitance of 104 F g-1 and energy density of 3.6 Wh kg-1). The addition of RHCDs increased the specific capacitance and energy density by 124 and 133%, respectively. This work can also be applied to other abundant biomasses, which will increase their value by using them in the high-performance and low-cost supercapacitor as an efficient energy storage system.
DOI: 10.5517/ccdc.csd.cc25l0ld
title: CCDC 2013313: Experimental Crystal Structure Determination

description: Related Article: Mhmuod Zughdani, Hasan Soliman Yusufoğlu, Güner Ekiz, Anthony Linden, İhsan Çalış|2020|Phytochemistry|180|112530|doi:10.1016/j.phytochem.2020.112530
DOI: 10.5517/ccdc.csd.cc26ckjp
title: CCDC 2036902: Experimental Crystal Structure Determination

description: Related Article: Maryam F. Abdollahi, Yuming Zhao|2021|J.Org.Chem.|86|14855|doi:10.1021/acs.joc.1c01633
DOI: 10.5517/ccdc.csd.cc26ckms
title: CCDC 2036905: Experimental Crystal Structure Determination

description: Related Article: Maryam F. Abdollahi, Yuming Zhao|2021|J.Org.Chem.|86|14855|doi:10.1021/acs.joc.1c01633
DOI: 10.5517/ccdc.csd.cc27f06x
title: CCDC 2068078: Experimental Crystal Structure Determination

description: Related Article: Maryam F. Abdollahi, Yuming Zhao|2021|J.Org.Chem.|86|14855|doi:10.1021/acs.joc.1c01633
DOI: 10.5517/ccdc.csd.cc27j2vq
title: CCDC 2071043: Experimental Crystal Structure Determination

description: Related Article: Ilya V. Chuchelkin, Konstantin N. Gavrilov, Vladislav K. Gavrilov, Sergey V. Zheglov, Ilya D. Firsin, Alexander M. Perepukhov, Alexander V. Maximychev, Nataliya E. Borisova, Ilya A. Zamilatskov, Vladimir S. Tyurin, Catherine Dejoie, Vladimir V. Chernyshev, Vladislav S. Zimarev, Nataliya S. Goulioukina|2021|Organometallics|40|3645|doi:10.1021/acs.organomet.1c00491
DOI: 10.5517/ccdc.csd.cc27p223
title: CCDC 2075824: Experimental Crystal Structure Determination

description: Related Article: Felicity J. Frank, Paul G. Waddell, Michael J. Hall, Julian G. Knight|2021|Org.Lett.|23|8595|doi:10.1021/acs.orglett.1c03317
DOI: 10.5517/ccdc.csd.cc27p234
title: CCDC 2075825: Experimental Crystal Structure Determination

description: Related Article: Felicity J. Frank, Paul G. Waddell, Michael J. Hall, Julian G. Knight|2021|Org.Lett.|23|8595|doi:10.1021/acs.orglett.1c03317
DOI: 10.5517/ccdc.csd.cc27p245
title: CCDC 2075826: Experimental Crystal Structure Determination

description: Related Article: Felicity J. Frank, Paul G. Waddell, Michael J. Hall, Julian G. Knight|2021|Org.Lett.|23|8595|doi:10.1021/acs.orglett.1c03317
DOI: 10.5517/ccdc.csd.cc27p256
title: CCDC 2075827: Experimental Crystal Structure Determination

description: Related Article: Felicity J. Frank, Paul G. Waddell, Michael J. Hall, Julian G. Knight|2021|Org.Lett.|23|8595|doi:10.1021/acs.orglett.1c03317
DOI: 10.5517/ccdc.csd.cc27p267
title: CCDC 2075828: Experimental Crystal Structure Determination

description: Related Article: Felicity J. Frank, Paul G. Waddell, Michael J. Hall, Julian G. Knight|2021|Org.Lett.|23|8595|doi:10.1021/acs.orglett.1c03317
DOI: 10.5517/ccdc.csd.cc27p278
title: CCDC 2075829: Experimental Crystal Structure Determination

description: Related Article: Felicity J. Frank, Paul G. Waddell, Michael J. Hall, Julian G. Knight|2021|Org.Lett.|23|8595|doi:10.1021/acs.orglett.1c03317
DOI: 10.34892/6pqq-d759
title: Global relative rate of natural capital depletion of biodiversity.

description: Depletion of biodiversity was defined as a decrease in species and habitat intactness, which affects the delivery of ecosystem services such as pollination and mass stabilisation, as well as recreation and tourism. 

The Biodiversity Intactness Index (BII), by Newbold et al. (2016), was determined to be a suitable indicator of depletion of biodiversity. The BII is a modelled average abundance of originally present species (species found in such an ecosystem in an intact state), relative to their abundance in an intact ecosystem (a pristine baseline). It models changes in the abundance and composition of ecological communities in response to a range of pressures, including land use change. It therefore reflects elements of habitat quantity and quality. The BII layer does not reflect recent change (unlike the other asset datasets used in the analysis) as intactness is modelled in comparison to fully intact natural habitat. A global layer depicting change in the BII (declines in the level of intactness compared to a fixed point in time) is in development, but not yet available. Eventually, this layer may distinguish areas where habitat loss is currently occurring from areas where habitat was lost historically. 

Large hotspots of biodiversity depletion (which correspond to the top 20% of relative depletion values) were found in the Great Plains in North America, the Southern cone of South America, Southern Africa, Central Asia, and Australia. The overlap of hotspots of biodiversity depletion with terrestrial biomes are detailed in Annex 2. 

Temperate Grasslands, Savannas and Shrublands had the greatest overlap (70%) with hotspots of depletion, whereas Boreal Forests and Taiga, and Tundra had close to no overlap.
DOI: 10.6084/m9.figshare.16989037
title: Supplementary Material for: Dysregulated Immunometabolism Is Associated with the Generation of Myeloid-Derived Suppressor Cells in <b><i>Staphylococcus aureus</i></b> Chronic Infection

description: Myeloid-derived suppressor cells (MDSCs) are a compendium of immature myeloid cells that exhibit potent T-cell suppressive capacity and expand during pathological conditions such as cancer and chronic infections. Although well-characterized in cancer, the physiology of MDSCs in the infection setting remains enigmatic. Here, we integrated single-cell RNA sequencing (scRNA-seq) and functional metabolic profiling to gain deeper insights into the factors governing the generation and maintenance of MDSCs in chronic <i>Staphylococcus aureus</i> infection. We found that MDSCs originate not only in the bone marrow but also at extramedullary sites in <i>S. aureus</i>-infected mice. scRNA-seq showed that infection-driven MDSCs encompass a spectrum of myeloid precursors in different stages of differentiation, ranging from promyelocytes to mature neutrophils. Furthermore, the scRNA-seq analysis has also uncovered valuable phenotypic markers to distinguish mature myeloid cells from immature MDSCs. Metabolic profiling indicates that MDSCs exhibit high glycolytic activity and high glucose consumption rates, which are required for undergoing terminal maturation. However, rapid glucose consumption by MDSCs added to infection-induced perturbations in the glucose supplies in infected mice hinders the terminal maturation of MDSCs and promotes their accumulation in an immature stage. In a proof-of-concept in vivo experiment, we demonstrate the beneficial effect of increasing glucose availability in promoting MDSC terminal differentiation in infected mice. Our results provide valuable information of how metabolic alterations induced by infection influence reprogramming and differentiation of MDSCs.
DOI: 10.15468/y7zw9t
title: New Species of Entypus (Hymenoptera: Pompilidae) and notes on the natural history of some Atlantic Forest spider wasps

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lopez, Vinicius M., Cardoso, Renan Kobal De Oliveira Alves, Cezário, Rodrigo R., Guillermo-Ferreira, Rhainer, Dos Santos, Eduardo F. (2021): New Species of Entypus (Hymenoptera: Pompilidae) and notes on the natural history of some Atlantic Forest spider wasps. Zootaxa 5061 (2): 361-368, DOI: https://doi.org/10.11646/zootaxa.5061.2.8
DOI: 10.6084/m9.figshare.16988674
title: A Campylobacter integrative and conjugative element with a CRISPR-Cas9 system targeting competing plasmids: a history of plasmid warfare?

description: Supplementary Material for 'A Campylobacter integrative and conjugative element with a CRISPR-Cas9 system targeting competing plasmids: a history of plasmid warfare?'<br>
DOI: 10.6084/m9.figshare.16988674.v1
title: A Campylobacter integrative and conjugative element with a CRISPR-Cas9 system targeting competing plasmids: a history of plasmid warfare?

description: Supplementary Material for 'A Campylobacter integrative and conjugative element with a CRISPR-Cas9 system targeting competing plasmids: a history of plasmid warfare?'<br>