cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29437733
title: ASV

description: ASV of soil microorganisms.
DOI: 10.6084/m9.figshare.29437733.v1
title: ASV

description: ASV of soil microorganisms.
DOI: 10.5281/zenodo.15779050
title: Hydro90 test data
DOI: 10.5281/zenodo.15779051
title: Hydro90 test data
DOI: 10.15468/dl.6ee8u6
title: Occurrence Download

description: A dataset containing 4301 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Fiji",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4301 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082896-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29442380
title: Dataset of <b>Supported Uranyl Photocatalyst on Hafnium-Metal-organic Layers for Alkylation of Cyclic Alcohols</b>

description: Visible-light excitation of uranyl cations produces highly oxidizing excited states capable of activating inert chemical bonds. The process utilizes 238U-depleted uranium, a fission fuel byproduct enriched in 238U, which has significantly lower radioactivity and is safe for practical use. However, homogeneous uranyl photocatalysis suffers from limited recyclability and potential uranium contamination concerns even with low radioactivity. Therefore, immobilization of depleted uranyl onto suitable supports is critical. To address these limitations, we implemented two distinct post-synthetic modification strategies targeting the secondary building units (SBUs) and organic linkers separately, enabling effective immobilization of uranyl ions on hafnium-based metal-organic layers (BTB/TPY-Hf-MOLs). Characterization revealed that BTB-Hf-MOL-U forms surface-bound uranyl species predominantly in the form of uranium oxide (UO3) nanoparticles, while TPY-Hf-MOL-U generates a single-site heterogeneous catalyst through ligand chelation. Under blue LED irradiation, BTB-Hf-MOL-U demonstrates noteworthy catalytic efficiency and diastereoselectivity, whereas TPY-Hf-MOL-U exhibited superior cycling stability.
DOI: 10.6084/m9.figshare.29442380.v1
title: Dataset of <b>Supported Uranyl Photocatalyst on Hafnium-Metal-organic Layers for Alkylation of Cyclic Alcohols</b>

description: Visible-light excitation of uranyl cations produces highly oxidizing excited states capable of activating inert chemical bonds. The process utilizes 238U-depleted uranium, a fission fuel byproduct enriched in 238U, which has significantly lower radioactivity and is safe for practical use. However, homogeneous uranyl photocatalysis suffers from limited recyclability and potential uranium contamination concerns even with low radioactivity. Therefore, immobilization of depleted uranyl onto suitable supports is critical. To address these limitations, we implemented two distinct post-synthetic modification strategies targeting the secondary building units (SBUs) and organic linkers separately, enabling effective immobilization of uranyl ions on hafnium-based metal-organic layers (BTB/TPY-Hf-MOLs). Characterization revealed that BTB-Hf-MOL-U forms surface-bound uranyl species predominantly in the form of uranium oxide (UO3) nanoparticles, while TPY-Hf-MOL-U generates a single-site heterogeneous catalyst through ligand chelation. Under blue LED irradiation, BTB-Hf-MOL-U demonstrates noteworthy catalytic efficiency and diastereoselectivity, whereas TPY-Hf-MOL-U exhibited superior cycling stability.
DOI: 10.6084/m9.figshare.29442521
title: Genetic Modulation of lncPSMB1 Confers Non-syndromic Cleft Lip with or without Cleft Palate Susceptibility by Promoting Cell Apoptosis

description: We performed RNA sequencing with HEPM cells transfected with an empty vector or <i>lncPSMB1</i> plasmid.
DOI: 10.6084/m9.figshare.29442521.v1
title: Genetic Modulation of lncPSMB1 Confers Non-syndromic Cleft Lip with or without Cleft Palate Susceptibility by Promoting Cell Apoptosis

description: We performed RNA sequencing with HEPM cells transfected with an empty vector or <i>lncPSMB1</i> plasmid.
DOI: 10.15468/dl.73nzm9
title: Occurrence Download

description: A dataset containing 156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Italy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 156 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082899-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dc3x3e
title: Occurrence Download

description: A dataset containing 6661 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anguilla japonica Temminck & Schlegel, 1846"
 ]
}

 The dataset includes 6661 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082898-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15779109
title: Students' readiness to work in Industry 4.0 conditions - PL responses

description: Study of students' readiness to work in Industry 4.0 conditions - responses of Polish students (raw data)
DOI: 10.5281/zenodo.15779110
title: Students' readiness to work in Industry 4.0 conditions - PL responses

description: Study of students' readiness to work in Industry 4.0 conditions - responses of Polish students (raw data)
DOI: 10.15468/dl.zec5bq
title: Occurrence Download

description: A dataset containing 946 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Jordan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 946 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082900-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ndqn4y
title: Occurrence Download

description: A dataset containing 663553 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 663553 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082887-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gqatmc
title: Occurrence Download

description: A dataset containing 315 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Larix gmelinii var. principis-rupprechtii (Mayr) Pilg."
 ]
}

 The dataset includes 315 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082901-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9wwpyq
title: Occurrence Download

description: A dataset containing 994 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carex vaginata Tausch",
 "Geometry POLYGON((-8.00174339329464 54.1998526673513, 0.202120938926891 54.1998526673513, 0.202120938926891 61.2628565887411, -8.00174339329464 61.2628565887411, -8.00174339329464 54.1998526673513))",
 "CoordinateUncertaintyInMeters is 0,101",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 994 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082902-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q43wak
title: Occurrence Download

description: A dataset containing 3597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Material citation, Specimen, Occurrence evidence)",
 "Continent is one of (North America, South America)",
 "TaxonKey is Sphyraenidae"
 ]
}

 The dataset includes 3597 records from 136 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082903-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q8fw3n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Kiribati",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082904-250525065834625/datasets/export for details.
DOI: 10.15468/dl.3und6s
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Material citation, Specimen, Occurrence evidence)",
 "Continent is one of (North America, South America)",
 "TaxonKey is Xiphiidae"
 ]
}

 The dataset includes 102 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082905-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvzvuu
title: Occurrence Download

description: A dataset containing 11611 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Madagascar",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11611 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082906-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hhk7p4
title: Occurrence Download

description: A dataset containing 87230 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Israel",
 "HasCoordinate is true"
 ]
}

 The dataset includes 87230 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082897-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15779119
title: Students' readiness to work in Industry 4.0 conditions - UA responses

description: Study of students' readiness to work in Industry 4.0 conditions - responses of Ukrainian students (raw data)
DOI: 10.5281/zenodo.15779118
title: Students' readiness to work in Industry 4.0 conditions - UA responses

description: Study of students' readiness to work in Industry 4.0 conditions - responses of Ukrainian students (raw data)
DOI: 10.15468/dl.pkeeyx
title: Occurrence Download

description: A dataset containing 1985 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Mauritius",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1985 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082907-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.89emdh
title: Occurrence Download

description: A dataset containing 4988 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Oman",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4988 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082909-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18112/openneuro.ds006395.v1.0.2
title: Upper limb dystonia, cervical dystonia and healthy controls dataset
DOI: 10.34847/nkl.6eb98klb
title: Site 6Honor

description: Dossier compressé du site 6Honor hébergé par l'université de Strasbourg. Il contient les fichiers HTML, CSS et images. Commentaires de diverses sections du Panégyrique pour le sixième consulat d'Honorius de Claudien.
description: Projet développé en lien avec le GIS international GIRPAM
description: Relation: https://6honor-girpam.u-strasbg.fr/
DOI: 10.5281/zenodo.15778578
title: Machine Learning na Predição de Longevidade Empresarial: Análise do Impacto das Licitações Públicas
DOI: 10.5281/zenodo.15778579
title: Machine Learning na Predição de Longevidade Empresarial: Análise do Impacto das Licitações Públicas
DOI: 10.15468/dl.xhcmks
title: Occurrence Download

description: A dataset containing 393 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Samoa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 393 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082912-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.79zd25
title: Occurrence Download

description: A dataset containing 4505 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myrica gale L.",
 "Geometry POLYGON((-8.00174339329464 54.1998526673513, 0.202120938926891 54.1998526673513, 0.202120938926891 61.2628565887411, -8.00174339329464 61.2628565887411, -8.00174339329464 54.1998526673513))",
 "CoordinateUncertaintyInMeters is 0,101",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4505 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082911-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nsp9aq
title: Occurrence Download

description: A dataset containing 2736 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "Country is Saudi Arabia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2736 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082913-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14849886
title: Predicting enhancer-gene links from single-cell multi-omics data by integrating prior Hi-C information

description: SCEG-HiC predicts links between genes and enhancers by integrating multi-omics data (either scATAC-seq/RNA-seq or scATAC-seq data alone) with three-dimensional omics data (bulk average Hi-C). The approach employs the weighted graphical lasso (wglasso) model to incorporate average bulk Hi-C data, effectively regularizing the correlation matrix with the prior Hi-C contact matrix as a penalty term.

Here, we generated mouse bulk average Hi-C data by averaging seven mouse Hi-C datasets from different cell types, including two embryonic stem cells (mESC1, mESC2), CH12LX, CH12F3, fiber cells, epithelial cells, and mature B cells. We adopted the activity-by-contact (ABC) model as a reference. The Hi-C matrices for each cell type were scale normalized at 5 kb resolution. To account for the known power-law decay of intra-chromosomal interactions, we corrected for differences in this decay across cell types before averaging. The final averaged Hi-C matrix was used as prior input for SCEG-HiC and is available as mouse_average_hic.tar.gz.

We evaluated the model on five human and five mouse paired scATAC-seq/RNA-seq datasets, and further applied it to COVID-19 PBMC scATAC-seq datasets. The human datasets, generated by 10x Genomics, include PBMC, skin stromal cells, fetal retina, brain gray matter, and developing cerebral cortex. These data are available as: PBMC_multiomic.rds, human_skin_multiomic.rds, human_retinal_multiomic.rds, human_brain_multiomic.rds, and human_cortex_multiomic.rds. The mouse datasets, collected from various platforms, cover embryonic brain, skin, adult cerebral cortex, thymic epithelial cells, and liver, and are available as: mouse_brain_multiomic.rds, mouse_skin_multiomic.rds, mouse_cortex_multiomic.rds, mouse_thymic_multiomic.rds, and mouse_liver_multiomic.rds. In addition, we applied the model to COVID-19 PBMC scATAC-seq datasets from SARS-CoV-2 infected individuals, available as covid_19_multiomic.rds. Data processing was carried out using standard Seurat and Signac workflows. This included quality control, normalization using SCTransform for RNA data, peak calling and matrix construction for ATAC data, dimensionality reduction using LSI, and cell type annotation based on canonical markers or original study metadata.
DOI: 10.5281/zenodo.14849885
title: Predicting enhancer-gene links from single-cell multi-omics data by integrating prior Hi-C information

description: SCEG-HiC predicts links between genes and enhancers by integrating multi-omics data (either scATAC-seq/RNA-seq or scATAC-seq data alone) with three-dimensional omics data (bulk average Hi-C). The approach employs the weighted graphical lasso (wglasso) model to incorporate average bulk Hi-C data, effectively regularizing the correlation matrix with the prior Hi-C contact matrix as a penalty term.

Here, we generated mouse bulk average Hi-C data by averaging seven mouse Hi-C datasets from different cell types, including two embryonic stem cells (mESC1, mESC2), CH12LX, CH12F3, fiber cells, epithelial cells, and mature B cells. We adopted the activity-by-contact (ABC) model as a reference. The Hi-C matrices for each cell type were scale normalized at 5 kb resolution. To account for the known power-law decay of intra-chromosomal interactions, we corrected for differences in this decay across cell types before averaging. The final averaged Hi-C matrix was used as prior input for SCEG-HiC and is available as mouse_average_hic.tar.gz.

We evaluated the model on five human and five mouse paired scATAC-seq/RNA-seq datasets, and further applied it to COVID-19 PBMC scATAC-seq datasets. The human datasets, generated by 10x Genomics, include PBMC, skin stromal cells, fetal retina, brain gray matter, and developing cerebral cortex. These data are available as: PBMC_multiomic.rds, human_skin_multiomic.rds, human_retinal_multiomic.rds, human_brain_multiomic.rds, and human_cortex_multiomic.rds. The mouse datasets, collected from various platforms, cover embryonic brain, skin, adult cerebral cortex, thymic epithelial cells, and liver, and are available as: mouse_brain_multiomic.rds, mouse_skin_multiomic.rds, mouse_cortex_multiomic.rds, mouse_thymic_multiomic.rds, and mouse_liver_multiomic.rds. In addition, we applied the model to COVID-19 PBMC scATAC-seq datasets from SARS-CoV-2 infected individuals, available as covid_19_multiomic.rds. Data processing was carried out using standard Seurat and Signac workflows. This included quality control, normalization using SCTransform for RNA data, peak calling and matrix construction for ATAC data, dimensionality reduction using LSI, and cell type annotation based on canonical markers or original study metadata.
DOI: 10.15468/dl.rfg4zx
title: Occurrence Download

description: A dataset containing 2469 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leopardus wiedii (Schinz, 1821)"
 ]
}

 The dataset includes 2469 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082914-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cbpjdt
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "TaxonKey is Anacamptis laxiflora (Lam.) R.M.Bateman, Pridgeon & M.W.Chase",
 "Year 1974-2025"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005161-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/ed343cbe3843b85e6b97dfb22fbb849f
title: Jornada Basin LTER: Wireless meteorological station at NPP C-CALI site: 1-second summary precipitation data: 2013 - ongoing

description: 1-second summary precipitation data at NPP C-CALI met station. Total precipitation per second is recorded only if there is measurable precipitation. This is recorded at an automated meteorological station installed at Jornada LTER NPP C-CALI site.. This climate station is operated by the Jornada LTER Program. IMPORTANT: Rainfall is only recorded when a bucket tip occurs on the tipping bucket rain gauge. If there is missing data due to equipment or other problems, there will be no indication of this within this dataset. The user needs to review precipitation values in the 30 minute, hourly, or data summary datasets to determine if there are missing periods in this 1 second detailed precipitation dataset. Reference the package i.d.'s knb-lter-jrn.210437016, knb-lter-jrn.210437031, and knb-lter-jrn.210437046 for the NPP C-CALI met station 30 minute, hourly, and daily summary datasets, respectively. This is an ONGOING dataset.
DOI: 10.15468/dl.r4qbsw
title: Occurrence Download

description: A dataset containing 804 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tremulicerus fulgidus (Fabricius, 1775)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 804 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005162-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/53a2381830321f90c9c1a3a96521f11b
title: Jornada Basin LTER: Wireless meteorological station at NPP C-GRAV site: 1-second summary precipitation data: 2013 - ongoing

description: 1-second summary precipitation data at NPP C-GRAV met station. Total precipitation per second is recorded only if there is measurable precipitation. This is recorded at an automated meteorological station installed at Jornada LTER NPP C-GRAV site.. This climate station is operated by the Jornada LTER Program. IMPORTANT: Rainfall is only recorded when a bucket tip occurs on the tipping bucket rain gauge. If there is missing data due to equipment or other problems, there will be no indication of this within this dataset. The user needs to review precipitation values in the 30 minute or hourly summary datasets to determine if there are missing data in this 1 second detailed precipitation dataset. Reference the package i.d.'s knb-lter-jrn.210437017, knb-lter-jrn.210437032, and knb-lter-jrn.210437047 for the NPP C-GRAV met station 30 minute, hourly, and daily summary datasets, respectively. This is an ONGOING dataset.