cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.q5tjbx
title: Occurrence Download

description: A dataset containing 117 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alpheus spongiarum Coutière, 1897"
 ]
}

 The dataset includes 117 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049669-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tm3bwk
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hydropsyche opthalmica Flint, 1965"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010754-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kg6t8d
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyoscyamus leptocalyx Stapf"
 ]
}

 The dataset includes 36 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026009-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3bwddf
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Astronesthes niger Richardson, 1845",
 "Year 2000-2024"
 ]
}

 The dataset includes 22 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012260-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.l67xzo
title: Occurrence Download

description: A dataset containing 1718 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tyto alba (Scopoli, 1769)",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1718 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010755-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ugmhw5
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is New Zealand",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cervus elaphus Linnaeus, 1758",
 "Year 1981-2024"
 ]
}

 The dataset includes 161 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026007-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n63bk9
title: Occurrence Download

description: A dataset containing 5027180 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 5027180 records from 3336 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004866-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gj8za
title: Occurrence Download

description: A dataset containing 6454 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spheniscus humboldti Meyen, 1834"
 ]
}

 The dataset includes 6454 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055328-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7wrtnm
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Cheirogaleus major É.Geoffroy Saint-Hilaire, 1812",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 26 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063446-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h7kpcf
title: Occurrence Download

description: A dataset containing 551 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bursera tomentosa (Jacq.) Triana & Planch."
 ]
}

 The dataset includes 551 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078438-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ypaqz
title: Occurrence Download

description: A dataset containing 291126 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Swiss National Amphibian Databank"
 ]
}

 The dataset includes 291126 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048027-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j7jag4
title: Occurrence Download

description: A dataset containing 26484 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepomis cyanellus Rafinesque, 1819"
 ]
}

 The dataset includes 26484 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048611-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kydvc9
title: Occurrence Download

description: A dataset containing 31983 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 31983 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033061-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cax8ht
title: Occurrence Download

description: A dataset containing 19881 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Curimatidae"
 ]
}

 The dataset includes 19881 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055331-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e6e8y7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tholodontidae"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060187-210914110416597/datasets/export for details.
DOI: 10.15468/dl.9t2u9a
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "TaxonKey is Pycreus polystachyos var. polystachyos"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046235-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fc3fy6
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-168 13,-51 13,-51 84,-168 84,-168 13))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rosa rubiginosa L.",
 "Year 2000-2020"
 ]
}

 The dataset includes 111 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075776-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ry51k6
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is South Sudan",
 "Country is Sudan"
 ]
 },
 "TaxonKey is Kobus megaceros (Fitzinger, 1855)"
 ]
}

 The dataset includes 112 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000553-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbkxqr
title: Occurrence Download

description: A dataset containing 81099 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "TaxonKey is Polypodiopsida"
 ]
}

 The dataset includes 81099 records from 183 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054279-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6xpnl
title: Occurrence Download

description: A dataset containing 376992 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prunus spinosa L."
 ]
}

 The dataset includes 376992 records from 455 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003159-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5l2wae
title: Occurrence Download

description: A dataset containing 249 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Gyalopion quadrangulare (Günther, 1893)"
 ]
}

 The dataset includes 249 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000554-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.du7t3w
title: Occurrence Download

description: A dataset containing 59532 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diglossa cyanea (Lafresnaye, 1840)"
 ]
}

 The dataset includes 59532 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0283000-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6ubn5
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chilodidae"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055321-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ud73gd
title: Occurrence Download

description: A dataset containing 2973 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "EventDate 2010-01-01-2020-05-01",
 "Geometry POLYGON((11.43677 50.89841,15.09888 51.01836,14.71802 53.60554,11.36352 53.58816,11.43677 50.89841))",
 "HasCoordinate is true",
 "TaxonKey is Luscinia megarhynchos C.L.Brehm, 1831",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2973 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054275-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cb3xwy
title: Occurrence Download

description: A dataset containing 33617 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyla cinerea (Schneider, 1799)"
 ]
}

 The dataset includes 33617 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182805-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uvf6vq
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample"
 ]
 },
 "Country is Guatemala",
 {
 "or" : [
 "DatasetKey is Datos de ocurrencia de triatominos americanos del Laboratorio de Triatominos del CEPAVE (CONICET-UNLP)",
 "DatasetKey is Geographically tagged INSDC sequences",
 "DatasetKey is iNaturalist Research-grade Observations"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Triatoma dimidiata (Latreille, 1811)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 1 records were derived from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035235-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zkwreu
title: Occurrence Download

description: A dataset containing 3050 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Barisia imbricata (Wiegmann, 1828)"
 ]
}

 The dataset includes 3050 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002718-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xplvxx
title: Occurrence Download

description: A dataset listing the 176315 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Unknown evidence"
 ]
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada",
 "Country is Mexico"
 ]
 },
 "TaxonKey is Arthropoda"
 ]
}

 The dataset's 176315 records were derived from 1348 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013433-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17063985
title: Are STAM MOFs overlooked as promising water-stable adsorbents? Elucidating their physical and hydrolytic properties using Machine-Learned Potentials.

description: This repository contains data for QHA calculations and MLP-MD simulations of STAM MOFs. Some previous dataset are available in the previous version STAM-v1.zip. In this new version, the additional dataset contains:

1. MLP-QHA-PhysicalProperties contains the trained MLP model and the cifs of the pristine and defective STAMs and HKUST-1 without water.

2. MLP-NEB contains the trained MLP model and initial and final states of the structures used in analysis of mechanism

3. MLP-MD contains the trained MLP model and structures used in MLP-MD simulations

4. MLP-GCMC contains the trained MLP model and structures used in MLP-GCMC simulations
DOI: 10.15468/dl.emqtc3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artemisia vulgaris",
 "Country is Palau",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022204-250914085247600/datasets/export for details.
DOI: 10.15468/dl.hhscuz
title: Occurrence Download

description: A dataset containing 163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artemisia vulgaris",
 "Country is Philippines",
 "HasCoordinate is true"
 ]
}

 The dataset includes 163 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022206-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fnjzsz
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artemisia vulgaris",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022207-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14287106
title: Are STAM MOFs overlooked as promising water-stable adsorbents? Elucidating their physical and hydrolytic properties using Machine-Learned Potentials.

description: This repository contains data for QHA calcations/MLP-MD simulations of STAM MOFs. 

 

1. The 'QHA-Calculations' folder contains the scripts/results obtained from QHA calculations. The subfolders within are organized as follows:

- 'CIF-structures' contain the optimized geometries of STAMs that were then used for DFTPT calculations

- 'INCAR_Configurations' contain the input parameters for VASP; including the ones used for geometry optimized (INCAR.OPT) and DFTPT (INCAR.DFTPT). The KPOINTS contains the kpoint-mesh (just the gamma point)

- 'QHA_results' contains the raw outputs from QHA calculations using phonopy (see subfolder CpData, BulkModulusData), the processed data for reference is provided in the csv files (Cp.csv, BulkModulus.csv)

 

2. The 'StructureSnapshots' folder contains the contain the structures used in illustrations:

- 'WaterClusters' contains the geometry of water clusters taken from 1ns MLP-MD simulation of water-sovlated STAM (Figure 4)

- 'STAM1-paddlewheels' contains the .VESTA files of the defective and stable paddlewheel obtained from the final snapshot of water-solvated STAM-1 (Figure 4) from 1 ns MLP-MD simulations

- 'DFT-Optimized' contains the optimized geometeries (without water) of the STAMs (shown in Figure S1)

 

3. The 'EnergyAndAngularData' folder contains a compressed csv-file "Ewc_Angle_inTriangular_HexagonalPores.csv";

  - This file contains raw data used to analyze distribution of relative water energy (e.g. Figure 5b) and angular information (Figure 5a):

- The relative potential energy of water clusters at each position in STAMs (denoted DeltaEwc, the column name in file is 'PotEner_Norm'). This is the data used to plot the 2D-histogram distributions of Delta_Ewc in the STAMs in (e.g. Figure 3b and 5b) . 

- Also the deviation in ange (denoted Delta_theta, referred to as 'stdAngle') is also used to plot the 2D-histogram distribution of Delta_Angle plots (e.g. Figure 4c and 5a). 

 

4. The 'WaterDiffusivity' folder contains 'water-diffusivity.csv', which has the raw data collected from diffusion studies in STAM, namely

- Water MSD (Ang^2) curves obtained from the mean MSD values over five 200 ps trajectories (200,000 points, sampled every 1fs).

- The MSD curves are shown separately for water in the hexagonal/triangular channels.

- The calculated diffusion coefficients (Dc in 10^-10 m^2/s) and the R-square of linear fit is also provided.
DOI: 10.5281/zenodo.14287105
title: Are STAM MOFs overlooked as promising water-stable adsorbents? Elucidating their physical and hydrolytic properties using Machine-Learned Potentials.

description: This repository contains data for QHA calculations and MLP-MD simulations of STAM MOFs. Some previous dataset are available in the previous version STAM-v1.zip. In this new version, the additional dataset contains:

1. MLP-QHA-PhysicalProperties contains the trained MLP model and the cifs of the pristine and defective STAMs and HKUST-1 without water.

2. MLP-NEB contains the trained MLP model and initial and final states of the structures used in analysis of mechanism

3. MLP-MD contains the trained MLP model and structures used in MLP-MD simulations

4. MLP-GCMC contains the trained MLP model and structures used in MLP-GCMC simulations
DOI: 10.5281/zenodo.17165613
title: Source Data

description: Source Data for "Accelerated growth increases the somatic epimutation rate in trees".
DOI: 10.5281/zenodo.17164287
title: Data for "Phase reduction analysis of traveling breathers in reaction–diffusion systems"

description: This dataset contains the time-series data of the phase differences shown in Fig. 6, Fig. 8, and Fig. 14 of the following paper:

T. Arai and Y. Kawamura, Phase reduction analysis of traveling breathers in reaction–diffusion systems, Physical Review Research (2025, in press).
DOI: 10.5281/zenodo.17164886
title: Data for "Phase reduction analysis of traveling breathers in reaction–diffusion systems"

description: This dataset contains the time-series data of the phase differences shown in Fig. 6, Fig. 8, and Fig. 14 of the following paper:

T. Arai and Y. Kawamura, Phase reduction analysis of traveling breathers in reaction–diffusion systems, Physical Review Research (2025, in press).
DOI: 10.15468/dl.hkbgd5
title: Occurrence Download

description: A dataset containing 622653 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Human Observation, Observation)",
 "Country is Hungary",
 "Geometry POLYGON((18.4848 47.95573,18.55802 47.71981,18.71911 47.63107,18.55802 47.36888,18.54338 47.0206,18.51409 46.51907,18.353 45.99253,18.57267 45.63529,19.21703 45.75803,19.12916 46.00271,19.26096 46.3576,19.33419 46.92067,19.42205 47.44322,19.45134 47.7789,19.21703 47.97534,18.4848 47.95573))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1901-2025"
 ]
}

 The dataset includes 622653 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022177-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtfgd4
title: Occurrence Download

description: A dataset containing 1913 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euterpe edulis"
 ]
}

 The dataset includes 1913 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022208-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cdwzvq
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artemisia vulgaris",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022209-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w9wmn2
title: Occurrence Download

description: A dataset containing 5171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Macaca mulatta"
 ]
}

 The dataset includes 5171 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022211-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.