cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12737939.v1
title: Additional file 9 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 9: Table S9. P. oxalicum secretory components and their transcriptional responses to Amy15A overproduction.
DOI: 10.6084/m9.figshare.12737322
title: Additional file 3 of The effect of aging on the biological and immunological characteristics of periodontal ligament stem cells

description: Additional file 3. mRNA_differential_expression/groupAvsgroupY_GO_Enrichment.xlsx.
DOI: 10.6084/m9.figshare.12737322.v1
title: Additional file 3 of The effect of aging on the biological and immunological characteristics of periodontal ligament stem cells

description: Additional file 3. mRNA_differential_expression/groupAvsgroupY_GO_Enrichment.xlsx.
DOI: 10.6084/m9.figshare.19029396
title: Additional file 11 of Loss of RPS27a expression regulates the cell cycle, apoptosis, and proliferation via the RPL11-MDM2-p53 pathway in lung adenocarcinoma cells

description: Additional file 11: Supplementary file 2. Information on IC50 of Dox-treated A549 cells.
DOI: 10.17632/5yy4764m57.1
title: Fiscal contracts 2019-24

description: General fiscal indicators from ICTD along with governance and regime indicators from Polity, V Dem, PRS, Heritage, and others. Used for testing hypotheses about the relationship of fiscal quantities, and their change over time, to political variables, and their changes over time.
DOI: 10.6084/m9.figshare.12737826
title: Additional file 5 of Splicing-accessible coding 3′UTRs control protein stability and interaction networks

description: Additional file 5: Table S4. Potential extended frames allowing translation into the 3’UTR of all mammalian species harboring a U2af26 gene.
DOI: 10.6084/m9.figshare.12737927.v1
title: Additional file 5 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 5: Table S5. Gene list of the 935 genes showed decrease in strain Δ13A-OamyR-ΔCreA as compared to strain Δ13A-OamyR.
DOI: 10.6084/m9.figshare.12737924
title: Additional file 4 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 4: Table S4. Gene list of the 762 genes showed increase in strain Δ13A-OamyR-ΔCreA as compared to strain Δ13A-OamyR.
DOI: 10.6084/m9.figshare.12737930
title: Additional file 6 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 6: Table S6. Gene list of the 66 genes showed continuously increase in strains Δ13A, Δ13A-OamyR, Δ13A-OamyR-ΔCreA.
DOI: 10.6084/m9.figshare.12737936
title: Additional file 8 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 8: Table S8. List of 40 putative transcription factors genes determined in this study that response to overexpression of AmyR and deletion of CreA.
DOI: 10.6084/m9.figshare.12737936.v1
title: Additional file 8 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 8: Table S8. List of 40 putative transcription factors genes determined in this study that response to overexpression of AmyR and deletion of CreA.
DOI: 10.6084/m9.figshare.19029396.v1
title: Additional file 11 of Loss of RPS27a expression regulates the cell cycle, apoptosis, and proliferation via the RPL11-MDM2-p53 pathway in lung adenocarcinoma cells

description: Additional file 11: Supplementary file 2. Information on IC50 of Dox-treated A549 cells.
DOI: 10.6084/m9.figshare.12736850.v1
title: Additional file 1 of Impact of initial dialysis modality on the survival of patients with ESRD in eastern China: a propensity-matched study

description: Additional file 1: Table S1. Baseline characteristics of 7761 excluded hemodialysis (HD) and 541 excluded peritoneal dialysis (PD) patients.
DOI: 10.6084/m9.figshare.12736863.v1
title: Additional file 2 of Intermittent theta burst stimulation (iTBS) combined with working memory training to improve cognitive function in schizophrenia: study protocol for a randomized controlled trial

description: Additional file 2. Funding Documentation: National Natural Science Foundation of China General Projects.
DOI: 10.6084/m9.figshare.12736866
title: Additional file 3 of Intermittent theta burst stimulation (iTBS) combined with working memory training to improve cognitive function in schizophrenia: study protocol for a randomized controlled trial

description: Additional file 3. Ethical review approval
DOI: 10.6084/m9.figshare.19029399.v1
title: Additional file 12 of Loss of RPS27a expression regulates the cell cycle, apoptosis, and proliferation via the RPL11-MDM2-p53 pathway in lung adenocarcinoma cells

description: Additional file 12: Supplementary file 3. Sequences of three different siRNAs for RPL11, RPS27a and p53.
DOI: 10.6084/m9.figshare.19029405
title: Additional file 14 of Loss of RPS27a expression regulates the cell cycle, apoptosis, and proliferation via the RPL11-MDM2-p53 pathway in lung adenocarcinoma cells

description: Additional file 14: Supplementary file 5. Information on identified proteins.
DOI: 10.6084/m9.figshare.20076701.v1
title: Additional file 1 of SARS-CoV-2 productively infects human brain microvascular endothelial cells

description: Additional file 1: Table S1. Primers used for qPCR in this study.
DOI: 10.6084/m9.figshare.20076704
title: Additional file 2 of SARS-CoV-2 productively infects human brain microvascular endothelial cells

description: Additional file 2: Table S2. Differentially expressed mRNAs (Control vs. Infection).
DOI: 10.6084/m9.figshare.20076704.v1
title: Additional file 2 of SARS-CoV-2 productively infects human brain microvascular endothelial cells

description: Additional file 2: Table S2. Differentially expressed mRNAs (Control vs. Infection).
DOI: 10.17632/p6cvdv425b.1
title: Online teaching attitude and behavioral intention of college teachers

description: The OTE questionnaire was distributed through an online platform to facilitate responses from college teachers at all times and locations. We leveraged social media to promote the survey and expand the sample size. A total of 1,127 teachers completed the OTE questionnaire, but we excluded those who answered the questionnaire too quickly and those who chose the same option for all items. Ultimately, 1,102 valid data points were collected, resulting in a questionnaire validity rate of 97.8%.
DOI: 10.6084/m9.figshare.12737133
title: Additional file 2 of Transcriptome analysis provides insights into the non-methylated lignin synthesis in Paphiopedilum armeniacum seed

description: Additional file 2: Table S1. Overview of transcriptome sequencing and de novo assembly results. Table S2. Overview of transcriptome assembly showing length distribution of transcript and unigene. Table S3. Summary of functional annotation of contigs from BLAST searches against public databases. Table S4. KEGG enrichment analysis list. Table S5. Lignin related genes with RPKM values. Table S6. Differentially expressed transcription factors (TFs) list. Table S7. Primers used for qRT-PCR. Table S8. Primers used in the reference genes selection. Table S9. Average Ct, ΔCT, and coefficient of variation (CV) values used for the reference genes selection. The average values are shown for at least three replicates per gene and tissue type. Table S10. CDS sequences for monolignol biosynthetic genes.
DOI: 10.6084/m9.figshare.12737169.v1
title: Additional file 1 of RADAR: annotation and prioritization of variants in the post-transcriptional regulome of RNA-binding proteins

description: Additional file 1: Large Supplemental Tables from RADAR providing results and summaries regarding the data used, but are too large to be put in PDF format.
DOI: 10.6084/m9.figshare.12737924.v1
title: Additional file 4 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 4: Table S4. Gene list of the 762 genes showed increase in strain Δ13A-OamyR-ΔCreA as compared to strain Δ13A-OamyR.
DOI: 10.6084/m9.figshare.12737927
title: Additional file 5 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 5: Table S5. Gene list of the 935 genes showed decrease in strain Δ13A-OamyR-ΔCreA as compared to strain Δ13A-OamyR.
DOI: 10.6084/m9.figshare.12737930.v1
title: Additional file 6 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 6: Table S6. Gene list of the 66 genes showed continuously increase in strains Δ13A, Δ13A-OamyR, Δ13A-OamyR-ΔCreA.
DOI: 10.6084/m9.figshare.12737939
title: Additional file 9 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 9: Table S9. P. oxalicum secretory components and their transcriptional responses to Amy15A overproduction.
DOI: 10.6084/m9.figshare.19029399
title: Additional file 12 of Loss of RPS27a expression regulates the cell cycle, apoptosis, and proliferation via the RPL11-MDM2-p53 pathway in lung adenocarcinoma cells

description: Additional file 12: Supplementary file 3. Sequences of three different siRNAs for RPL11, RPS27a and p53.
DOI: 10.6084/m9.figshare.19029405.v1
title: Additional file 14 of Loss of RPS27a expression regulates the cell cycle, apoptosis, and proliferation via the RPL11-MDM2-p53 pathway in lung adenocarcinoma cells

description: Additional file 14: Supplementary file 5. Information on identified proteins.
DOI: 10.6084/m9.figshare.12737933
title: Additional file 7 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 7: Table S7. Gene list of the 134 genes showed continuously decrease in strains Δ13A, Δ13A-OamyR, Δ13A-OamyR-ΔCreA
DOI: 10.6084/m9.figshare.12737933.v1
title: Additional file 7 of Constructing a novel expression system by specific activation of amylase expression pathway in Penicillium

description: Additional file 7: Table S7. Gene list of the 134 genes showed continuously decrease in strains Δ13A, Δ13A-OamyR, Δ13A-OamyR-ΔCreA
DOI: 10.6084/m9.figshare.10116560.v1
title: Java source code to repeat the experiment;Weibo data collected by the experiment from Endogenetic structure of filter bubble in social networks

description: The filter bubble is an intermediate structure to provoke polarization and echo chamber in social network, and it has become one of the most urgent issues for social media of the time. Previous studies usually equated filter bubbles with community structures and emphasized this exogenous isolation effect, but there is a lack of full discussion of the internal organization of filter bubbles. Here, we design an experiment for analysing filter bubbles taking advantage of social bots. We deployed 128 bots to Weibo (the largest microblogging network in China), and each bot consumed a specific topic (entertainment or sci-tech) and ran for at least two months. In total, we recorded about 1.3 million messages exposed to these bots and their social networks. By analysing the text received by the bots and motifs in their social networks, we found that a filter bubble is not only a dense community of users with the same preferences but also presents an endogenetic unidirectional star-like structure. The structure could spontaneously exclude non-preferred information and cause polarization. Moreover, our work proved that the felicitous use of artificial intelligence technology could provide an useful experimental approach that combines privacy protection and controllability in studying social media.
DOI: 10.6084/m9.figshare.12737169
title: Additional file 1 of RADAR: annotation and prioritization of variants in the post-transcriptional regulome of RNA-binding proteins

description: Additional file 1: Large Supplemental Tables from RADAR providing results and summaries regarding the data used, but are too large to be put in PDF format.
DOI: 10.6084/m9.figshare.10116563
title: Java source code to repeat the experiment;Weibo data collected by the experiment from Endogenetic structure of filter bubble in social networks

description: The filter bubble is an intermediate structure to provoke polarization and echo chamber in social network, and it has become one of the most urgent issues for social media of the time. Previous studies usually equated filter bubbles with community structures and emphasized this exogenous isolation effect, but there is a lack of full discussion of the internal organization of filter bubbles. Here, we design an experiment for analysing filter bubbles taking advantage of social bots. We deployed 128 bots to Weibo (the largest microblogging network in China), and each bot consumed a specific topic (entertainment or sci-tech) and ran for at least two months. In total, we recorded about 1.3 million messages exposed to these bots and their social networks. By analysing the text received by the bots and motifs in their social networks, we found that a filter bubble is not only a dense community of users with the same preferences but also presents an endogenetic unidirectional star-like structure. The structure could spontaneously exclude non-preferred information and cause polarization. Moreover, our work proved that the felicitous use of artificial intelligence technology could provide an useful experimental approach that combines privacy protection and controllability in studying social media.
DOI: 10.6084/m9.figshare.10116554
title: Java source code to repeat the experiment from Endogenetic structure of filter bubble in social networks.

description: The filter bubble is an intermediate structure to provoke polarization and echo chambers in social networks, and it has become one of today's most urgent issues for social media. Previous studies usually equated filter bubbles with community structures and emphasized this exogenous isolation effect, but there is a lack of full discussion of the internal organization of filter bubbles. Here, we design an experiment for analysing filter bubbles taking advantage of social bots. We deployed 128 bots to Weibo (the largest microblogging network in China), and each bot consumed a specific topic (entertainment or sci-tech) and ran for at least two months. In total, we recorded about 1.3 million messages exposed to these bots and their social networks. By analysing the text received by the bots and motifs in their social networks, we found that a filter bubble is not only a dense community of users with the same preferences but also presents an endogenetic unidirectional star-like structure. The structure could spontaneously exclude non-preferred information and cause polarization. Moreover, our work proved that the felicitous use of artificial intelligence technology could provide an useful experimental approach that combines privacy protection and controllability in studying social media.
DOI: 10.6084/m9.figshare.10116554.v1
title: Java source code to repeat the experiment; Weibo data collected by the experiment from Endogenetic structure of filter bubble in social networks

description: The filter bubble is an intermediate structure to provoke polarization and echo chamber in social network, and it has become one of the most urgent issues for social media of the time. Previous studies usually equated filter bubbles with community structures and emphasized this exogenous isolation effect, but there is a lack of full discussion of the internal organization of filter bubbles. Here, we design an experiment for analysing filter bubbles taking advantage of social bots. We deployed 128 bots to Weibo (the largest microblogging network in China), and each bot consumed a specific topic (entertainment or sci-tech) and ran for at least two months. In total, we recorded about 1.3 million messages exposed to these bots and their social networks. By analysing the text received by the bots and motifs in their social networks, we found that a filter bubble is not only a dense community of users with the same preferences but also presents an endogenetic unidirectional star-like structure. The structure could spontaneously exclude non-preferred information and cause polarization. Moreover, our work proved that the felicitous use of artificial intelligence technology could provide an useful experimental approach that combines privacy protection and controllability in studying social media.
DOI: 10.6084/m9.figshare.10116554.v2
title: Java source code to repeat the experiment from Endogenetic structure of filter bubble in social networks.

description: The filter bubble is an intermediate structure to provoke polarization and echo chambers in social networks, and it has become one of today's most urgent issues for social media. Previous studies usually equated filter bubbles with community structures and emphasized this exogenous isolation effect, but there is a lack of full discussion of the internal organization of filter bubbles. Here, we design an experiment for analysing filter bubbles taking advantage of social bots. We deployed 128 bots to Weibo (the largest microblogging network in China), and each bot consumed a specific topic (entertainment or sci-tech) and ran for at least two months. In total, we recorded about 1.3 million messages exposed to these bots and their social networks. By analysing the text received by the bots and motifs in their social networks, we found that a filter bubble is not only a dense community of users with the same preferences but also presents an endogenetic unidirectional star-like structure. The structure could spontaneously exclude non-preferred information and cause polarization. Moreover, our work proved that the felicitous use of artificial intelligence technology could provide an useful experimental approach that combines privacy protection and controllability in studying social media.
DOI: 10.6084/m9.figshare.19028933
title: Additional file 2 of Genome-wide annotation of protein-coding genes in pig

description: Additional file 2. List of sequencing quality control metrics, overview of samples used for analysis, and a description of the mapping of tissue types to organ systems and grouped tissues.
DOI: 10.34740/kaggle/dsv/7612447
title: Mahanagar Yatayat Transport Dataset
DOI: 10.6084/m9.figshare.12737846.v1
title: Additional file 3 of DNA methylation data-based molecular subtype classification and prediction in patients with gastric cancer

description: Additional file 3: Table S3. 271 genes obtained by genomic annotation.
DOI: 10.6084/m9.figshare.12737837.v1
title: Additional file 1 of DNA methylation data-based molecular subtype classification and prediction in patients with gastric cancer

description: Additional file 1: Table S1. 22,062 significant methylation sites.
DOI: 10.6084/m9.figshare.12737849.v1
title: Additional file 4 of DNA methylation data-based molecular subtype classification and prediction in patients with gastric cancer

description: Additional file 4: Table S4. The expression profile of the 271 genes in 160 samples.
DOI: 10.6084/m9.figshare.12737846
title: Additional file 3 of DNA methylation data-based molecular subtype classification and prediction in patients with gastric cancer

description: Additional file 3: Table S3. 271 genes obtained by genomic annotation.
DOI: 10.6084/m9.figshare.12737837
title: Additional file 1 of DNA methylation data-based molecular subtype classification and prediction in patients with gastric cancer

description: Additional file 1: Table S1. 22,062 significant methylation sites.
DOI: 10.6084/m9.figshare.12737843
title: Additional file 2 of DNA methylation data-based molecular subtype classification and prediction in patients with gastric cancer

description: Additional file 2: Table S2. 347 cluster-specific methylation sites.
DOI: 10.6084/m9.figshare.12737843.v1
title: Additional file 2 of DNA methylation data-based molecular subtype classification and prediction in patients with gastric cancer

description: Additional file 2: Table S2. 347 cluster-specific methylation sites.
DOI: 10.6084/m9.figshare.12737849
title: Additional file 4 of DNA methylation data-based molecular subtype classification and prediction in patients with gastric cancer

description: Additional file 4: Table S4. The expression profile of the 271 genes in 160 samples.
DOI: 10.6084/m9.figshare.12737133.v1
title: Additional file 2 of Transcriptome analysis provides insights into the non-methylated lignin synthesis in Paphiopedilum armeniacum seed

description: Additional file 2: Table S1. Overview of transcriptome sequencing and de novo assembly results. Table S2. Overview of transcriptome assembly showing length distribution of transcript and unigene. Table S3. Summary of functional annotation of contigs from BLAST searches against public databases. Table S4. KEGG enrichment analysis list. Table S5. Lignin related genes with RPKM values. Table S6. Differentially expressed transcription factors (TFs) list. Table S7. Primers used for qRT-PCR. Table S8. Primers used in the reference genes selection. Table S9. Average Ct, ΔCT, and coefficient of variation (CV) values used for the reference genes selection. The average values are shown for at least three replicates per gene and tissue type. Table S10. CDS sequences for monolignol biosynthetic genes.
DOI: 10.6084/m9.figshare.10116560
title: Java source code to repeat the experiment;Weibo data collected by the experiment from Endogenetic structure of filter bubble in social networks

description: The filter bubble is an intermediate structure to provoke polarization and echo chamber in social network, and it has become one of the most urgent issues for social media of the time. Previous studies usually equated filter bubbles with community structures and emphasized this exogenous isolation effect, but there is a lack of full discussion of the internal organization of filter bubbles. Here, we design an experiment for analysing filter bubbles taking advantage of social bots. We deployed 128 bots to Weibo (the largest microblogging network in China), and each bot consumed a specific topic (entertainment or sci-tech) and ran for at least two months. In total, we recorded about 1.3 million messages exposed to these bots and their social networks. By analysing the text received by the bots and motifs in their social networks, we found that a filter bubble is not only a dense community of users with the same preferences but also presents an endogenetic unidirectional star-like structure. The structure could spontaneously exclude non-preferred information and cause polarization. Moreover, our work proved that the felicitous use of artificial intelligence technology could provide an useful experimental approach that combines privacy protection and controllability in studying social media.