cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30857525.v1
title: Sequencing data of "Pulpal Pressure Aggravates Pulpitis by Mechano-Inflammatory Signal Synergy"

description: Sequencing data of "Pulpal Pressure Aggravates Pulpitis by Mechano-Inflammatory Signal Synergy"
DOI: 10.15151/esrf-es-2309418176
title: Probing crystallinity of in vivo grown crystals of the green fluorescent protein obtained by recombinant expression in bacillus thuriengiens

description: We will test the crystallinity of in vivo grown crystals of the green fluorescent protein obtained by recombinant expression in bacillus thuriengiensis (a bacteria that is not harmful to human and is being used worldwide to grow organic crops in the absence of chemical pesticides).
Two types of samples will be tested; gfp crystals still enclosed in the bacteria, and crystals purified out of the bacteria.
DOI: 10.15151/esrf-es-2309441946
title: Heavy metal samples and beam damage testing

description: Additional measurements from IHHG66
DOI: 10.5281/zenodo.17895084
title: Laborbestätigte Influenzafälle in Deutschland

description: Im Datensatz "Laborbestätigte Influenzafälle in Deutschland" des Robert Koch-Instituts werden die Daten basierend auf Meldungen zu Infektionen mit dem Influenzavirus nach dem Infektionsschutzgesetz (IfSG) bereitgestellt. Darin enthalten sind Informationen auf Bundeslandebene zu Infektionen nach Falldefinition des Robert Koch-Instituts, differenziert nach Altersgruppen. Diese Daten dienen als Grundlage für epidemiologische Bewertungen und gesundheitspolitische Maßnahmen.
DOI: 10.5281/zenodo.17895085
title: Respiratorische Synzytialvirusfälle in Deutschland

description: Im Datensatz "Respiratorische Synzytialvirusfälle in Deutschland" des Robert Koch-Instituts werden die Daten basierend auf Meldungen zu Infektionen mit dem Respiratorischen Synzytial-Virus (RSV) nach dem Infektionsschutzgesetz (IfSG) bereitgestellt. Darin enthalten sind Informationen auf Bundeslandebene zu Infektionen nach Falldefinition des Robert Koch-Instituts, differenziert nach Altersgruppen. Diese Daten dienen als Grundlage für epidemiologische Bewertungen und gesundheitspolitische Maßnahmen.
DOI: 10.5281/zenodo.15153846
title: Table 1 in A New Species of Apple Snail in the Genus Pomacea (Gastropoda: Caenogastropoda: Ampullariidae)

description: Table 1. Morphological comparison of Pomacea occulta nov. sp. with Pomacea maculata and Pomacea canaliculata. Typical characteristics of Pomacea maculata and Pomacea canaliculata are from Hayes et al. (2012). Columns in gray are features shared by two species
Pomacea maculataPomacea canaliculataPomacea occulta nov. sp.Adult shellThicknessThickThinThickSurfaceGeneral smooth, fine axial growthSmoothGeneral smooth, fine axial growthlines and frequent periodic growthlines and frequent periodic growtharrestsarrests, channeled sutures andspiral lined shallow malleationBody whorl shoulderAngulatedRoundedAngulatedInner pallial lipPigmented yellow-orange-redUnpigmentedPigmented yellow-orange-redOperculumInflexible, evenly thickFlexible, thinning dorsally towardsFlexible, thinning dorsally towardsedgeedgeAnatomical charactersKidneyAnterior leafletsNarrowBroadBroadPosterior leafletsShallow cleft with arc topDeep tapering cleftDeep tapering cleftRadulaRachidian baseConcaveConvexConcavePenis sheath glandsApical gland and basal glandApical gland and medial gland,Apical gland and medial gland,medial gland located right of themedial gland located in the sheathsheath channel and extending intochannelchannelEggsEggs per clutchA few hundred to> 450012 to ~100087 to ~1000Average egg diameter<2.00 mm> 3.00 mm2.38 mmOne-day hatchlingsMean hatching height1.249 mm2.754 mm2.23 mmMean first whorl width of hatchling0.812 mm2.406 mm2.11 mm
description: Published as part of Yang, Qian-Qian & Yu, Xiao-Ping, 2019, A New Species of Apple Snail in the Genus Pomacea (Gastropoda: Caenogastropoda: Ampullariidae), pp. 5 in Zoological Studies 58 (13) on page 5, DOI: 10.6620/ZS.2019.58-13, http://zenodo.org/record/8064741
DOI: 10.5281/zenodo.15153847
title: Table 1 in A New Species of Apple Snail in the Genus Pomacea (Gastropoda: Caenogastropoda: Ampullariidae)

description: Table 1. Morphological comparison of Pomacea occulta nov. sp. with Pomacea maculata and Pomacea canaliculata. Typical characteristics of Pomacea maculata and Pomacea canaliculata are from Hayes et al. (2012). Columns in gray are features shared by two species
Pomacea maculataPomacea canaliculataPomacea occulta nov. sp.Adult shellThicknessThickThinThickSurfaceGeneral smooth, fine axial growthSmoothGeneral smooth, fine axial growthlines and frequent periodic growthlines and frequent periodic growtharrestsarrests, channeled sutures andspiral lined shallow malleationBody whorl shoulderAngulatedRoundedAngulatedInner pallial lipPigmented yellow-orange-redUnpigmentedPigmented yellow-orange-redOperculumInflexible, evenly thickFlexible, thinning dorsally towardsFlexible, thinning dorsally towardsedgeedgeAnatomical charactersKidneyAnterior leafletsNarrowBroadBroadPosterior leafletsShallow cleft with arc topDeep tapering cleftDeep tapering cleftRadulaRachidian baseConcaveConvexConcavePenis sheath glandsApical gland and basal glandApical gland and medial gland,Apical gland and medial gland,medial gland located right of themedial gland located in the sheathsheath channel and extending intochannelchannelEggsEggs per clutchA few hundred to> 450012 to ~100087 to ~1000Average egg diameter<2.00 mm> 3.00 mm2.38 mmOne-day hatchlingsMean hatching height1.249 mm2.754 mm2.23 mmMean first whorl width of hatchling0.812 mm2.406 mm2.11 mm
description: Published as part of Yang, Qian-Qian & Yu, Xiao-Ping, 2019, A New Species of Apple Snail in the Genus Pomacea (Gastropoda: Caenogastropoda: Ampullariidae), pp. 5 in Zoological Studies 58 (13) on page 5, DOI: 10.6620/ZS.2019.58-13, http://zenodo.org/record/8064741
DOI: 10.5281/zenodo.17791012
title: COMSOL Multiphysics Model for Wireless Passive Temperature and Pressure sensors

description: This repository contains the COMSOL Multiphysics model (.mph) used in the paper titled “Multiphysics Analysis and Simulation of Wireless Passive Temperature and Pressure sensors for Harsh-Environment Applications”, accepted for publication in a future issue of IEEE Journal on Multiscale and Multiphysics Computational Techniques. To view the article abstract page, please use the below URL: https://ieeexplore.ieee.org/document/11286216The models include the complete geometry, material definitions, physics interfaces, boundary conditions, solver configurations, and post-processing settings used to reproduce multiphysics simulation results presented in the manuscript.

The provided file enables full reproducibility of the numerical study and may serve as a reference for researchers working on the electromagnetic-thermal-mechanical multiphysics simulation of microwave sensors.

Contents:





Temperature_Sensor_EM_heat.mph Temperature_Sensor_thermal_stress.mph— The original COMSOL Multiphysics models used in the paper for temperature sensor simulations, evaluating the electromagnetic–thermal coupling effect and the thermal–mechanical coupling effect, respectively.


Pressure_Sensor_thermal_stress.mph — The original COMSOL Multiphysics model used in the paper for pressure sensor simulations, evaluating the thermal–mechanical coupling effect.



Compatible version: COMSOL Multiphysics 6.0




Required physics modules: RF Module, Heat Transfer Module, and Structural Mechanics Module



Usage Instructions:Open the Temperature_Sensor/Pressure_Sensor.mph file using COMSOL Multiphysics 6.0. All simulation settings and solver sequences are preconfigured. Users may modify parameters or geometry as needed.

Citation:If you use this model in your work, please cite the associated paper and this Zenodo dataset using the DOI provided.
DOI: 10.5281/zenodo.17791011
title: COMSOL Multiphysics Model for Wireless Passive Temperature and Pressure sensors

description: This repository contains the COMSOL Multiphysics model (.mph) used in the paper titled “Multiphysics Analysis and Simulation of Wireless Passive Temperature and Pressure sensors for Harsh-Environment Applications”, accepted for publication in a future issue of IEEE Journal on Multiscale and Multiphysics Computational Techniques. To view the article abstract page, please use the below URL: https://ieeexplore.ieee.org/document/11286216The models include the complete geometry, material definitions, physics interfaces, boundary conditions, solver configurations, and post-processing settings used to reproduce multiphysics simulation results presented in the manuscript.

The provided file enables full reproducibility of the numerical study and may serve as a reference for researchers working on the electromagnetic-thermal-mechanical multiphysics simulation of microwave sensors.

Contents:





Temperature_Sensor_EM_heat.mph Temperature_Sensor_thermal_stress.mph— The original COMSOL Multiphysics models used in the paper for temperature sensor simulations, evaluating the electromagnetic–thermal coupling effect and the thermal–mechanical coupling effect, respectively.


Pressure_Sensor_thermal_stress.mph — The original COMSOL Multiphysics model used in the paper for pressure sensor simulations, evaluating the thermal–mechanical coupling effect.



Compatible version: COMSOL Multiphysics 6.0




Required physics modules: RF Module, Heat Transfer Module, and Structural Mechanics Module



Usage Instructions:Open the Temperature_Sensor/Pressure_Sensor.mph file using COMSOL Multiphysics 6.0. All simulation settings and solver sequences are preconfigured. Users may modify parameters or geometry as needed.

Citation:If you use this model in your work, please cite the associated paper and this Zenodo dataset using the DOI provided.
DOI: 10.15468/dl.m2unsd
title: Occurrence Download

description: A dataset containing 47110193 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "DatasetKey is iNaturalist Research-grade Observations",
 "Country is United States of America",
 "Year is greater than or equal to 1984",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 47110193 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046492-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17188019
title: Vibe Coding in Practice: Motivations, Challenges, and a Future Outlook - a Grey Literature Review

description: This dataset accompanies the paper “Vibe Coding in Practice: Motivations, Challenges, and a Future Outlook – a Grey Literature Review.” It contains systematic extractions from 154 grey literature sources, including 101 included sources and 518 coded behavioral units. The dataset now provides six sheets in the main workbook and an additional thematic-analysis workbook, enabling full transparency and reproducibility.

 

The main file, Vibe Coding in Practice GLR DataSet.xlsx, includes:

(1) GL_Screening_Data_Extraction (row-level quotes, interpretations, themes, and metadata);

(2) GL_QA Scores & Evidence (quality assessment scores with justifications);

(3) GL_QA Scoring Guide (the rubric used for QA scoring);

(4) Stats (summary counts of sources and behavioral units);

(5) Search Settings (search engine, query configurations, hit counts, and screening depth);

(6) Behavioral_Units (compact raw evidence table containing Source ID, RQ, quote, interpretation, and final theme).

 

A second file, AllThemes_Analysis.xlsx, provides theme-level summaries used in the paper, including definitions, frequencies, percentages, cross-RQ comparisons, and chart-ready data for all final themes across motivations, experiences, QA behaviors, and code-quality perceptions.

 

Together, these files allow complete reproduction of the GLR process and support follow-up research on vibe-coding motivations, experiences, QA practices, and perceived code quality.
DOI: 10.5281/zenodo.17894798
title: Vibe Coding in Practice: Motivations, Challenges, and a Future Outlook - a Grey Literature Review

description: This dataset accompanies the paper “Vibe Coding in Practice: Motivations, Challenges, and a Future Outlook – a Grey Literature Review.” It contains systematic extractions from 154 grey literature sources, including 101 included sources and 518 coded behavioral units. The dataset now provides six sheets in the main workbook and an additional thematic-analysis workbook, enabling full transparency and reproducibility.

 

The main file, Vibe Coding in Practice GLR DataSet.xlsx, includes:

(1) GL_Screening_Data_Extraction (row-level quotes, interpretations, themes, and metadata);

(2) GL_QA Scores & Evidence (quality assessment scores with justifications);

(3) GL_QA Scoring Guide (the rubric used for QA scoring);

(4) Stats (summary counts of sources and behavioral units);

(5) Search Settings (search engine, query configurations, hit counts, and screening depth);

(6) Behavioral_Units (compact raw evidence table containing Source ID, RQ, quote, interpretation, and final theme).

 

A second file, AllThemes_Analysis.xlsx, provides theme-level summaries used in the paper, including definitions, frequencies, percentages, cross-RQ comparisons, and chart-ready data for all final themes across motivations, experiences, QA behaviors, and code-quality perceptions.

 

Together, these files allow complete reproduction of the GLR process and support follow-up research on vibe-coding motivations, experiences, QA practices, and perceived code quality.
DOI: 10.5281/zenodo.17894923
title: AIDA-Syn

description: AIDA-Syn is a synthetic dataset meant to be used as a diagnostic tool for contamination detection in LLMs.

We provide smaller versions of the dataset (10, 50 and 100 documents) containing different alternatives than the full dataset.

Do note that the document reference IRIs remain the same across the 4 provided datasets despite document mentions, mention spans and entities varying.

The data is provided in NIF / TTL (NLP Interchange Format / Turtle) format and can be ingested using e.g. pynif or any knowledge graph database.
DOI: 10.5281/zenodo.17894924
title: AIDA-Syn

description: AIDA-Syn is a synthetic dataset meant to be used as a diagnostic tool for contamination detection in LLMs.

We provide smaller versions of the dataset (10, 50 and 100 documents) containing different alternatives than the full dataset.

Do note that the document reference IRIs remain the same across the 4 provided datasets despite document mentions, mention spans and entities varying.

The data is provided in NIF / TTL (NLP Interchange Format / Turtle) format and can be ingested using e.g. pynif or any knowledge graph database.
DOI: 10.15468/dl.arpd2j
title: Occurrence Download

description: A dataset containing 47110193 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "DatasetKey is iNaturalist Research-grade Observations",
 "Country is United States of America",
 "Year is greater than or equal to 1984",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 47110193 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046493-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.np874w
title: Occurrence Download

description: A dataset containing 1913 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ribes mandshuricum"
 ]
}

 The dataset includes 1913 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046505-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30857564
title: Landslides data

description: Landslides for UHLE
DOI: 10.6084/m9.figshare.30857564.v1
title: Landslides data

description: Landslides for UHLE
DOI: 10.6084/m9.figshare.30857495
title: Lipid metabolism data of mycobacterial phage swu1 early expression gene <i>gp53</i> overexpressing bacteria cultured in trehalose and glucose

description: Lipids metabolism data of mycobacterial phage swu1 <i>gp53 </i>expression in <i>mycolicibacterium smegmatis</i> under trehalose and glucose culture conditions. 53H represents gp53 overexpressing bacteria cultured in trehalose, 53P represents gp53 overexpressing bacteria cultured in glucose; PH stands for palace empty bacteria cultured in trehalose, PP stands for palace empty bacteria cultured in glucose.
DOI: 10.6084/m9.figshare.30857495.v1
title: Lipid metabolism data of mycobacterial phage swu1 early expression gene <i>gp53</i> overexpressing bacteria cultured in trehalose and glucose

description: Lipids metabolism data of mycobacterial phage swu1 <i>gp53 </i>expression in <i>mycolicibacterium smegmatis</i> under trehalose and glucose culture conditions. 53H represents gp53 overexpressing bacteria cultured in trehalose, 53P represents gp53 overexpressing bacteria cultured in glucose; PH stands for palace empty bacteria cultured in trehalose, PP stands for palace empty bacteria cultured in glucose.
DOI: 10.15468/dl.zmmmy3
title: Occurrence Download

description: A dataset containing 264519 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to 34.085278",
 "DecimalLatitude is less than or equal to 39.085278",
 "DecimalLongitude is greater than or equal to 130.0",
 "DecimalLongitude is less than or equal to 135.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 264519 records from 176 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046498-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v62cph
title: Occurrence Download

description: A dataset containing 384878 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((119.23696 29.62607,121.07348 29.62607,121.07348 30.85932,119.23696 30.85932,119.23696 29.62607))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 384878 records from 290 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046467-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uwvyrt
title: Occurrence Download

description: A dataset containing 389760 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is one of (Ammodramus savannarum)",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 1951",
 "Year is less than or equal to 2024",
 "Month is greater than or equal to April",
 "Month is less than or equal to July",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 389760 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046499-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30857471
title: <b>Characterization of the complete chloroplast genome of </b><b>Sphagnum multifibrosum</b><b> (Sphagnaceae), a unique moss</b>

description: Sphagnum (Sphagnaceae) plays key roles in southwestern China’s wetland water conservation and carbon sequestration. This study reports the first complete chloroplast genome (plastome) of Sphagnum multifibrosum X. J. Li & M. Zang, an endangered alpine wetland species. The circular cp genome has a total length of 140,417 bp, comprising a large single-copy (LSC) region of 98,305 bp, a small single-copy (SSC) region of 21,340 bp, and two inverted repeat (IR) regions, each 10,386 bp in length. The genome encodes a total of 129 functional genes, including 84 protein-coding genes, 8 ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. The overall GC content was determined to be 36.83%. Among the genes, eleven were identified as containing introns. Nine of these possess a single intron, while the clpP and ycf3 genes are unique in containing two introns each. The IR regions were found to contain duplicates of eight protein-coding genes, two tRNA genes, and all four rRNA genes. Maximum likelihood phylogenetic analysis (based on Sphagnales plastomes) strongly supports a close relationship between S. multifibrosum and S. palustre, clarifying its subgenus placement. This plastome resource aids Sphagnaceae taxonomy, evolutionary research, and conservation of this endangered species.
DOI: 10.6084/m9.figshare.30857471.v1
title: <b>Characterization of the complete chloroplast genome of </b><b>Sphagnum multifibrosum</b><b> (Sphagnaceae), a unique moss</b>

description: Sphagnum (Sphagnaceae) plays key roles in southwestern China’s wetland water conservation and carbon sequestration. This study reports the first complete chloroplast genome (plastome) of Sphagnum multifibrosum X. J. Li & M. Zang, an endangered alpine wetland species. The circular cp genome has a total length of 140,417 bp, comprising a large single-copy (LSC) region of 98,305 bp, a small single-copy (SSC) region of 21,340 bp, and two inverted repeat (IR) regions, each 10,386 bp in length. The genome encodes a total of 129 functional genes, including 84 protein-coding genes, 8 ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. The overall GC content was determined to be 36.83%. Among the genes, eleven were identified as containing introns. Nine of these possess a single intron, while the clpP and ycf3 genes are unique in containing two introns each. The IR regions were found to contain duplicates of eight protein-coding genes, two tRNA genes, and all four rRNA genes. Maximum likelihood phylogenetic analysis (based on Sphagnales plastomes) strongly supports a close relationship between S. multifibrosum and S. palustre, clarifying its subgenus placement. This plastome resource aids Sphagnaceae taxonomy, evolutionary research, and conservation of this endangered species.
DOI: 10.15468/zp5umd
title: Agarna malayi Tiwari 1952

description: This dataset contains the digitized treatments in Plazi based on the original journal article Wang, Zhi, Qiu, Jian-Wen, Salazar-Vallejo, Sergio I. (2018): Agarna malayi Tiwari 1952. Zoological Studies (Zool. Stud.) 57 (5): 1-11, DOI: 10.6620/ZS.2018.57-05, URL: http://dx.doi.org/10.5281/zenodo.12826721
DOI: 10.15468/dl.3cubtp
title: Occurrence Download

description: A dataset containing 23511 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Burmanniaceae"
 ]
}

 The dataset includes 23511 records from 529 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046508-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f59n8t
title: Occurrence Download

description: A dataset containing 77405 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "TaxonKey is Anser anser (Linnaeus, 1758)",
 "Year is 2023"
 ]
}

 The dataset includes 77405 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007880-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.