cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10432611
title: Instances for the Hampered k-Median Problem with Neighbourhoods

description: This repository contains the instances used for studying the Hampered k-Median Problem with Neighborhoods (KMPN). The instances are saved in .csv format. For each folder, a README.txt is included to load the instances to include to the model.
DOI: 10.5281/zenodo.10432612
title: Instances for the Hampered k-Median Problem with Neighbourhoods

description: This repository contains the instances used for studying the Hampered k-Median Problem with Neighborhoods (KMPN). The instances are saved in .csv format. For each folder, a README.txt is included to load the instances to include to the model.
DOI: 10.6084/m9.figshare.24903552
title: Dataset from Catch-up growth and adult overweight in offspring of young gecko mothers resembling low birth weight infants

description: Complete dataset
DOI: 10.6084/m9.figshare.24903552.v1
title: Dataset from Catch-up growth and adult overweight in offspring of young gecko mothers resembling low birth weight infants

description: Complete dataset
DOI: 10.6084/m9.figshare.24038328
title: <b>A Dataset of </b><b>HLA-C*06:02 Peptidomes</b>

description: The dataset provides comprehensive information on HLA-C*06:02 immunopeptidomes of human B cells, consisting of a full list of HLA class-I peptides eluted from four human HLA-C*06:02-homozygous EBV-transformed B cell lines, which was identified by Prof<i>.</i> Andreas Schlosser and Melissa Bernhardt (Rudolf-Virchow-Center, Center for Integrative and Translational Bioimaging, University of Würzburg), as well as HLA-C*06:02 ligands unveiled by Di Marco <i>et al</i>. (doi: 10.1097/ppo.0000000000000252) and Sarkizova <i>et al</i>. (doi: 10.1038/s41587-019-0322-9).Note that the immunopeptidomes from four HLA-C*06:02-homozygous EBV-transformed B cell lines are the full MHC I-immunopeptidomes, with an HLA assignment provided in the lane "BD."
DOI: 10.6084/m9.figshare.24038328.v1
title: <b>A Dataset of </b><b>HLA-C*06:02 Peptidomes</b>

description: The dataset provides comprehensive information on HLA-C*06:02 immunopeptidomes of human B cells, consisting of a full list of HLA class-I peptides eluted from four human HLA-C*06:02-homozygous EBV-transformed B cell lines, which was identified by Prof<i>.</i> Andreas Schlosser and Melissa Bernhardt (Rudolf-Virchow-Center, Center for Integrative and Translational Bioimaging, University of Würzburg), as well as HLA-C*06:02 ligands unveiled by Di Marco <i>et al</i>. (doi: 10.1097/ppo.0000000000000252) and Sarkizova <i>et al</i>. (doi: 10.1038/s41587-019-0322-9).Note that the immunopeptidomes from four HLA-C*06:02-homozygous EBV-transformed B cell lines are the full MHC I-immunopeptidomes, with an HLA assignment provided in the lane "BD."
DOI: 10.6084/m9.figshare.24903561
title: Supplementary text, figures S1–S3, and tables S3–S4 from Ecological structure of diversity-dependent diversification in Phanerozoic marine bivalves

description: Rigorous analysis of diversity-dependence—the hypothesis that the rate of proliferation of new species is inversely related to standing diversity—requires consideration of the ecology of the organisms in question. Differences between infaunal marine bivalves (living entirely within the sediment) and epifaunal forms (living partially or completely above the sediment-water interface) predict that these major ecological groups should have different diversity dynamics: epifaunal species may compete more intensely for space and be more susceptible to predation and physical disturbance. By comparing detrended standing diversity with rates of diversification, origination, and extinction in this exceptional fossil record, we find that epifaunal bivalves experienced significant, negative diversity-dependence in origination and net diversification, whereas infaunal forms show little appreciable relationship between diversity and evolutionary rates. This macroevolutionary contrast is robust to the time span over which dynamics are analysed, whether mass-extinction rebounds are included in the analysis, the treatment of stratigraphic ranges that are not maximally resolved, and the details of detrending. We also find that diversity-dependence persists over hundreds of millions of years, even though diversity itself rises nearly exponentially, belying the notion that diversity-dependence must imply equilibrial diversity dynamics.
DOI: 10.6084/m9.figshare.24903567
title: Table S1: Geological time scale used for this study from Ecological structure of diversity-dependent diversification in Phanerozoic marine bivalves

description: Rigorous analysis of diversity-dependence—the hypothesis that the rate of proliferation of new species is inversely related to standing diversity—requires consideration of the ecology of the organisms in question. Differences between infaunal marine bivalves (living entirely within the sediment) and epifaunal forms (living partially or completely above the sediment-water interface) predict that these major ecological groups should have different diversity dynamics: epifaunal species may compete more intensely for space and be more susceptible to predation and physical disturbance. By comparing detrended standing diversity with rates of diversification, origination, and extinction in this exceptional fossil record, we find that epifaunal bivalves experienced significant, negative diversity-dependence in origination and net diversification, whereas infaunal forms show little appreciable relationship between diversity and evolutionary rates. This macroevolutionary contrast is robust to the time span over which dynamics are analysed, whether mass-extinction rebounds are included in the analysis, the treatment of stratigraphic ranges that are not maximally resolved, and the details of detrending. We also find that diversity-dependence persists over hundreds of millions of years, even though diversity itself rises nearly exponentially, belying the notion that diversity-dependence must imply equilibrial diversity dynamics.
DOI: 10.6084/m9.figshare.24903567.v1
title: Table S1: Geological time scale used for this study from Ecological structure of diversity-dependent diversification in Phanerozoic marine bivalves

description: Rigorous analysis of diversity-dependence—the hypothesis that the rate of proliferation of new species is inversely related to standing diversity—requires consideration of the ecology of the organisms in question. Differences between infaunal marine bivalves (living entirely within the sediment) and epifaunal forms (living partially or completely above the sediment-water interface) predict that these major ecological groups should have different diversity dynamics: epifaunal species may compete more intensely for space and be more susceptible to predation and physical disturbance. By comparing detrended standing diversity with rates of diversification, origination, and extinction in this exceptional fossil record, we find that epifaunal bivalves experienced significant, negative diversity-dependence in origination and net diversification, whereas infaunal forms show little appreciable relationship between diversity and evolutionary rates. This macroevolutionary contrast is robust to the time span over which dynamics are analysed, whether mass-extinction rebounds are included in the analysis, the treatment of stratigraphic ranges that are not maximally resolved, and the details of detrending. We also find that diversity-dependence persists over hundreds of millions of years, even though diversity itself rises nearly exponentially, belying the notion that diversity-dependence must imply equilibrial diversity dynamics.
DOI: 10.6084/m9.figshare.24903570
title: R code used for this study from Ecological structure of diversity-dependent diversification in Phanerozoic marine bivalves

description: Rigorous analysis of diversity-dependence—the hypothesis that the rate of proliferation of new species is inversely related to standing diversity—requires consideration of the ecology of the organisms in question. Differences between infaunal marine bivalves (living entirely within the sediment) and epifaunal forms (living partially or completely above the sediment-water interface) predict that these major ecological groups should have different diversity dynamics: epifaunal species may compete more intensely for space and be more susceptible to predation and physical disturbance. By comparing detrended standing diversity with rates of diversification, origination, and extinction in this exceptional fossil record, we find that epifaunal bivalves experienced significant, negative diversity-dependence in origination and net diversification, whereas infaunal forms show little appreciable relationship between diversity and evolutionary rates. This macroevolutionary contrast is robust to the time span over which dynamics are analysed, whether mass-extinction rebounds are included in the analysis, the treatment of stratigraphic ranges that are not maximally resolved, and the details of detrending. We also find that diversity-dependence persists over hundreds of millions of years, even though diversity itself rises nearly exponentially, belying the notion that diversity-dependence must imply equilibrial diversity dynamics.
DOI: 10.6084/m9.figshare.24903570.v1
title: R code used for this study from Ecological structure of diversity-dependent diversification in Phanerozoic marine bivalves

description: Rigorous analysis of diversity-dependence—the hypothesis that the rate of proliferation of new species is inversely related to standing diversity—requires consideration of the ecology of the organisms in question. Differences between infaunal marine bivalves (living entirely within the sediment) and epifaunal forms (living partially or completely above the sediment-water interface) predict that these major ecological groups should have different diversity dynamics: epifaunal species may compete more intensely for space and be more susceptible to predation and physical disturbance. By comparing detrended standing diversity with rates of diversification, origination, and extinction in this exceptional fossil record, we find that epifaunal bivalves experienced significant, negative diversity-dependence in origination and net diversification, whereas infaunal forms show little appreciable relationship between diversity and evolutionary rates. This macroevolutionary contrast is robust to the time span over which dynamics are analysed, whether mass-extinction rebounds are included in the analysis, the treatment of stratigraphic ranges that are not maximally resolved, and the details of detrending. We also find that diversity-dependence persists over hundreds of millions of years, even though diversity itself rises nearly exponentially, belying the notion that diversity-dependence must imply equilibrial diversity dynamics.
DOI: 10.6084/m9.figshare.24903573
title: Supplemental file 2 from A Paleogene stem crotaphytid (<i>Aciprion formosum</i>) and the phylogenetic affinities of early fossil pleurodontan iguanians

description: Phylogenetic matrix and analysis commands
DOI: 10.6084/m9.figshare.24903573.v1
title: Supplemental file 2 from A Paleogene stem crotaphytid (<i>Aciprion formosum</i>) and the phylogenetic affinities of early fossil pleurodontan iguanians

description: Phylogenetic matrix and analysis commands
DOI: 10.6084/m9.figshare.24903576
title: Supplemental file 3 from A Paleogene stem crotaphytid (<i>Aciprion formosum</i>) and the phylogenetic affinities of early fossil pleurodontan iguanians

description: Phylogenetic trees
DOI: 10.6084/m9.figshare.24903576.v1
title: Supplemental file 3 from A Paleogene stem crotaphytid (<i>Aciprion formosum</i>) and the phylogenetic affinities of early fossil pleurodontan iguanians

description: Phylogenetic trees
DOI: 10.21227/9g0b-er61
title: FSLP datasets for DR

description: BIOKG is a medical Knowledge Graph (KG) constructed using data from numerous biomedical data repositories. It encompasses various types of entities, including diseases, proteins, drugs, side effects, and protein functions. The KG consists of 51 types of directed relations that connect different pairs of entity types. These relations encompass diverse aspects such as drug-drug interactions (39 types), protein-protein interactions (8 types), as well as drug-protein, drug-side effect, and drug-protein function relations. This dataset serves as a valuable resource for both basic and biomedical machine learning research. From a biological perspective, it enables researchers to delve deeper into the understanding of human biology and make predictions that can guide future biomedical investigations.  COVID19-One: To demonstrate the ability of our model to run on small-scale KGs, we follow a similar process to build another smaller dataset based on a public COVID-19 KG dataset (http://openkg.cn/dataset/covid-19-research). The knowledge graph contains 7 node types and 9 semantic relations. Among 9 kinds of relations, two of them are derived from genome-level knowledge databases.
DOI: 10.34740/kaggle/dsv/7284056
title: 2021 World Population (updated daily)
DOI: 10.6084/m9.figshare.24872034.v1
title: The tectonic responses in the overriding plate during the Paleo-Tethyan convergence and the progressive extrusion process in Sundaland: insights from the Wuliangshan massif, SE Tibetan Plateau

description: We present the results of zircon U-Pb and Hf isotope analyses for the Wuliangshan metamorphic complex in the southeast Tibetan Plateau. According to this data, we reveal that the Wuliangshan metamorphic complex reflects the tectonic events of rapid subsidence and deposition that occurred within a short period from 260-250 Ma in a back-arc tectonic setting. Then, statistics of <sup>40</sup>Ar/<sup>39</sup>Ar age data from the Red River Fault, the Chongshan-Lancang River Fault, and the Gaoligong Fault are presented to discuss the tectonic extrusion process of the Sundaland.
DOI: 10.34740/kaggle/dsv/7284070
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.14457/tu.the.2023.14
title: ผลของโปรแกรมส่งเสริมความเชื่อด้านสุขภาพต่อพฤติกรรมป้องกันการ กลับเป็นซ้ำของผู้ป่วยโรคกล้ามเนื้อหัวใจตายเฉียบพลัน

description: โรคกล้ามเนื้อหัวใจตายเฉียบพลัน เป็นโรคเรื้อรังที่เป็นปัญหาทางสาธารณสุขสำหรับประชากรไทยและประชากรโลก โดยพบผู้ป่วยและผู้เสียชีวิตมีแนวโน้มเพิ่มสูงขึ้น เพื่อให้เกิดพฤติกรรมที่เหมาะสมในการป้องกันการกลับเป็นซ้ำของโรคและมีความเชื่อด้านสุขภาพเหมาะสม การศึกษาในครั้งนี้ เป็นการวิจัยกึ่งทดลอง มีวัตถุประสงค์เพื่อศึกษาผลของโปรแกรมส่งเสริมความเชื่อด้านสุขภาพต่อพฤติกรรมป้องกันการกลับเป็นซ้ำของผู้ป่วยโรคกล้ามเนื้อหัวใจตายเฉียบพลัน โดยประยุกต์ใช้ทฤษฎีแบบแผนความเชื่อด้านสุขภาพ กลุ่มตัวอย่างเป็นผู้ป่วยโรคกล้ามเนื้อหัวใจตายเฉียบพลันที่ได้รับการรักษาด้วยวิธีการขยายหลอดเลือดด้วยบอลลูนและใส่ขดลวดโครงตาข่าย จำนวน 48 คน คัดเลือกกลุ่มตัวอย่างโดยการสุ่มอย่างง่าย แบ่งเป็นกลุ่มทดลองที่ได้รับโปรแกรมส่งเสริมความเชื่อด้านสุขภาพ จำนวน 24 คน และกลุ่มควบคุมที่ได้รับการดูแลตามปกติ จำนวน 24 คน เครื่องมือที่ใช้เป็นโปรแกรมส่งเสริมความเชื่อด้านสุขภาพต่อพฤติกรรมป้องกันการกลับเป็นซ้ำของผู้ป่วยโรคกล้ามเนื้อหัวใจตายเฉียบพลัน คู่มือการปฏิบัติตัวของผู้ป่วยโรคกล้ามเนื้อหัวใจตายเฉียบพลันหลังการขยายหลอดเลือดหัวใจเพื่อป้องกันการกลับเป็นซ้ำของโรค แบบสอบถามข้อมูลส่วนบุคคลของผู้ป่วยโรคกล้ามเนื้อหัวใจตายเฉียบพลัน แบบประเมินพฤติกรรมเพื่อป้องกันการกลับเป็นซ้ำของโรคกล้ามเนื้อหัวใจตายเฉียบพลัน ทดสอบค่าดัชนีความตรงของเนื้อหาได้ 0.93 และทำการทดสอบค่าความเชื่อมั่นของเนื้อหาได้ 0.88 วิเคราะห์ข้อมูลทั่วไปด้วยสถิติเชิงพรรณาและสถิติทดสอบค่าที ผลการวิจัย พบว่า หลังได้รับโปรแกรม กลุ่มทดลองมีคะแนนเฉลี่ยพฤติกรรมป้องกันการกลับเป็นซ้ำของโรคกล้ามเนื้อหัวใจตายเฉียบพลันสูงกว่าก่อนได้รับโปรแกรมอย่างมีนัยสำคัญทางสถิติ (p &lt; .001) กลุ่มทดลองมีคะแนนเฉลี่ยพฤติกรรมป้องกันการกลับเป็นซ้ำของโรคกล้ามเนื้อหัวใจตายเฉียบพลันสูงกว่ากลุ่มควบคุมอย่างมีนัยสำคัญทางสถิติ (p &lt; .001)
DOI: 10.6084/m9.figshare.24785877
title: Assessing the disparity: comparative toxicity of Copper in zebrafish larvae exposes alarming consequences of permissible concentrations in Brazil

description: Copper (Cu) is a naturally occurring metal with essential micronutrient properties. However, this metal might also pose increased adverse environmental and health risks due to industrial and agricultural activities. In Brazil, the maximum allowable concentration of Cu in drinking water is 2 mg/L. Despite this standard, the impact of such concentrations on aquatic organisms remains unexplored. This study aimed to evaluate the toxicity of CuSO<sub>4</sub> using larval zebrafish at environmentally relevant concentrations. Zebrafish (<i>Danio rerio</i>) larvae at 72 hr post-fertilization (hpf) were exposed to nominal CuSO<sub>4</sub> concentrations ranging from 0.16 to 48 mg/L to determine the median lethal concentration (LC<sub>50</sub>), established at 8.4 mg/L. Subsequently, non-lethal concentrations of 0.16, 0.32, or 1.6 mg/L were selected for assessing CuSO<sub>4</sub> -induced toxicity. Morphological parameters, including body length, yolk sac area, and swim bladder area, were adversely affected by CuSO<sub>4</sub> exposure, particularly at 1.6 mg/L (3.31 mm ±0.1, 0.192 mm<sup>2</sup> ±0.01, and 0.01 mm<sup>2</sup> ±0.05, respectively). In contrast, the control group exhibited values of 3.62 mm ±0.09, 0.136 mm<sup>2</sup> ±0.013, and 0.3 mm<sup>2</sup> ±0.06, respectively. Behavioral assays demonstrated impairments in escape response and swimming capacity, accompanied by increased levels of reactive oxygen species (ROS) and lipid peroxidation. In addition, decreased levels of non-protein thiols and reduced cellular viability were noted. Data demonstrated that exposure to CuSO<sub>4</sub> at similar concentrations as those permitted in Brazil for Cu adversely altered morphological, biochemical, and behavioral endpoints in zebrafish larvae. This study suggests that the permissible Cu concentrations in Brazil need to be reevaluated, given the potential enhanced adverse health risks of exposure to environmental metal contamination.
DOI: 10.6084/m9.figshare.24785877.v1
title: Assessing the disparity: comparative toxicity of Copper in zebrafish larvae exposes alarming consequences of permissible concentrations in Brazil

description: Copper (Cu) is a naturally occurring metal with essential micronutrient properties. However, this metal might also pose increased adverse environmental and health risks due to industrial and agricultural activities. In Brazil, the maximum allowable concentration of Cu in drinking water is 2 mg/L. Despite this standard, the impact of such concentrations on aquatic organisms remains unexplored. This study aimed to evaluate the toxicity of CuSO<sub>4</sub> using larval zebrafish at environmentally relevant concentrations. Zebrafish (<i>Danio rerio</i>) larvae at 72 hr post-fertilization (hpf) were exposed to nominal CuSO<sub>4</sub> concentrations ranging from 0.16 to 48 mg/L to determine the median lethal concentration (LC<sub>50</sub>), established at 8.4 mg/L. Subsequently, non-lethal concentrations of 0.16, 0.32, or 1.6 mg/L were selected for assessing CuSO<sub>4</sub> -induced toxicity. Morphological parameters, including body length, yolk sac area, and swim bladder area, were adversely affected by CuSO<sub>4</sub> exposure, particularly at 1.6 mg/L (3.31 mm ±0.1, 0.192 mm<sup>2</sup> ±0.01, and 0.01 mm<sup>2</sup> ±0.05, respectively). In contrast, the control group exhibited values of 3.62 mm ±0.09, 0.136 mm<sup>2</sup> ±0.013, and 0.3 mm<sup>2</sup> ±0.06, respectively. Behavioral assays demonstrated impairments in escape response and swimming capacity, accompanied by increased levels of reactive oxygen species (ROS) and lipid peroxidation. In addition, decreased levels of non-protein thiols and reduced cellular viability were noted. Data demonstrated that exposure to CuSO<sub>4</sub> at similar concentrations as those permitted in Brazil for Cu adversely altered morphological, biochemical, and behavioral endpoints in zebrafish larvae. This study suggests that the permissible Cu concentrations in Brazil need to be reevaluated, given the potential enhanced adverse health risks of exposure to environmental metal contamination.
DOI: 10.6084/m9.figshare.24903594
title: Transcripts_Uterotonic.docx

description: A retrospective observational study collected data from labour rooms and the Special Newborn Care Unit in Shrawasti. In-depth interviews with healthcare workers provided qualitative insights. Interventions were implemented based on initial findings and evaluated through systematic data organization and assessment.
DOI: 10.6084/m9.figshare.24903594.v1
title: Transcripts_Uterotonic.docx

description: A retrospective observational study collected data from labour rooms and the Special Newborn Care Unit in Shrawasti. In-depth interviews with healthcare workers provided qualitative insights. Interventions were implemented based on initial findings and evaluated through systematic data organization and assessment.
DOI: 10.6084/m9.figshare.24903558
title: Table 1

description: Table
DOI: 10.6084/m9.figshare.24903699
title: Table 3

description: Table
DOI: 10.6084/m9.figshare.24903699.v1
title: Table 3

description: Table
DOI: 10.6084/m9.figshare.24903801
title: Xiaojiejie data sharing

description: Media convergence blurs the boundary between media production and media consumption and obscures the lines between institutions and individuals. Media convergence in the context of China has garnered attention in communication studies and in cultural studies. However, there is a scarcity of research on convergence culture from a linguistic perspective. Recent research has generated initial evidence that state media appropriates a pop-cultural social address for clickbait and information management in China’s digital media space. However, the patterns and perceptual reality of linguistic convergence remain unexplored. This study investigates popular and party uses of <i>xiaojiejie </i>‘little older sister’, a familiar expression of fictive kinship reborn as a viral personal reference and social address in China’s convergence culture. Analysis of the Target Group Index in the Baidu search engine suggests <i>xiaojiejie </i>is gaining ground over its predecessor among young Chinese. Trends analysis of its usage in WeChat public accounts showed that the term has spread from popular media to state media, which employs the viral address for clickbait and propaganda. An online survey of young Chinese WeChat users (<i>N</i>=330) on their perception of <i>xiaojiejie </i>headlines from WeChat public accounts showed that respondents could not tell state media uses from popular uses, providing perceptual evidence of the blurry boundaries between popular and state media uses of the viral address. The findings demonstrate the reality of linguistic convergence driven by participatory performance and its perceptual consequences in China’s convergence culture.