cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/6ezfxp
title: Molecular phylogeny of the grasshopper family Pyrgomorphidae (Caelifera Orthoptera) reveals rampant paraphyly and convergence of traditionally used taxonomic characters

description: This dataset contains the digitized treatments in Plazi based on the original journal article Zahid, Sundus, Mariño-Pérez, Ricardo, Song, Hojun (2021): Molecular phylogeny of the grasshopper family Pyrgomorphidae (Caelifera Orthoptera) reveals rampant paraphyly and convergence of traditionally used taxonomic characters. Zootaxa 4969 (1): 101-118, DOI: https://doi.org/10.11646/zootaxa.4969.1.5
DOI: 10.6084/m9.figshare.14680521
title: employer_cats.tsv

description: Mappings from employer to employer type
DOI: 10.6084/m9.figshare.14680521.v1
title: employer_cats.tsv

description: Mappings from employer to employer type
DOI: 10.5255/ukda-sn-853703
title: The ESRC Nexus Network: Core Activities and Outputs, 2014-2018

description: From its launch in June 2014 through to the end of its project life in 2018, the ESRC Nexus Network worked to support transdisciplinary research at the food-water-energy-environment nexus and to create meaningful links between communities of researchers, policymakers, business leaders and practitioners. Data collated here includes records of public facing network activities such as published working papers, reports, email newsletters and workshop activities. The purpose of the Network+ was to build community through running events, interacting with decision makers, building a network and onward-funding original research. As such, the Network+ did not conduct research in a traditional sense. However, the data and documents collated here represent the substantive knowledge creation activities of the Network+ and can be considered a form of research data in themselves - which were used to iteratively build the network, influence and impact.
DOI: 10.6084/m9.figshare.14680539
title: Supplementary Material for: Analysis of axial length in young patients with Marfan syndrome and bilateral ectopia lentis by Z-scores

description: Medicine
DOI: 10.6084/m9.figshare.14680539.v1
title: Supplementary Material for: Analysis of axial length in young patients with Marfan syndrome and bilateral ectopia lentis by Z-scores

description: Medicine
DOI: 10.5281/zenodo.4808575
title: Near attack conformation analysis data set for HIV-1 protease enzyme-substrate catalysis

description: This is a post-processed data set from explicit solvent MD simulations of HIV-1 protease bound to different natural substrates, with computed properties related to near attack conformations during enzyme catalysis and based on the publications: S.K. Sadiq‡ (2020) Catalysts, Fine-tuning of sequence-specificity by near attack conformations in enzyme-catalyzed peptide hydrolysis, 10 (6) 684 Sadiq, S.K. ‡ and Coveney P.V. (2015). J Chem Theor Comput. Computing the role of near attack conformations in an enzyme-catalyzed nucleophilic bimolecular reaction. 11 (1), pp 316–324 Further information, notebooks and python scripts for analyzing this data set, including to reproduce the above publications can be found at: https://github.com/kashifsadiq/hiv1pr-nacs Please follow the instructions in the github to download and unpack the data.
description: {"references": ["S.K. Sadiq\u2021 (2020) Catalysts, Fine-tuning of sequence-specificity by near attack conformations in enzyme-catalyzed peptide hydrolysis, 10 (6) 684", "Sadiq, S.K. \u2021 and Coveney P.V. (2015). J Chem Theor Comput. Computing the role of near attack conformations in an enzyme-catalyzed nucleophilic bimolecular reaction. 11 (1), pp 316\u2013324"]}
DOI: 10.5281/zenodo.4808574
title: Near attack conformation analysis data set for HIV-1 protease enzyme-substrate catalysis

description: This is a post-processed data set from explicit solvent MD simulations of HIV-1 protease bound to different natural substrates, with computed properties related to near attack conformations during enzyme catalysis and based on the publications: S.K. Sadiq‡ (2020) Catalysts, Fine-tuning of sequence-specificity by near attack conformations in enzyme-catalyzed peptide hydrolysis, 10 (6) 684 Sadiq, S.K. ‡ and Coveney P.V. (2015). J Chem Theor Comput. Computing the role of near attack conformations in an enzyme-catalyzed nucleophilic bimolecular reaction. 11 (1), pp 316–324 Further information, notebooks and python scripts for analyzing this data set, including to reproduce the above publications can be found at: https://github.com/kashifsadiq/hiv1pr-nacs Please follow the instructions in the github to download and unpack the data.
description: {"references": ["S.K. Sadiq\u2021 (2020) Catalysts, Fine-tuning of sequence-specificity by near attack conformations in enzyme-catalyzed peptide hydrolysis, 10 (6) 684", "Sadiq, S.K. \u2021 and Coveney P.V. (2015). J Chem Theor Comput. Computing the role of near attack conformations in an enzyme-catalyzed nucleophilic bimolecular reaction. 11 (1), pp 316\u2013324"]}
DOI: 10.6084/m9.figshare.14680527
title: role_classification_model_more_data.bin

description: Multilingual BERT model finetuned for the task of identifying the role of a person behind a quote.
DOI: 10.6084/m9.figshare.14680527.v1
title: role_classification_model_more_data.bin

description: Multilingual BERT model finetuned for the task of identifying the role of a person behind a quote.
DOI: 10.6084/m9.figshare.14680524
title: role_cats.tsv

description: mappings from role to role type
DOI: 10.6084/m9.figshare.14680524.v1
title: role_cats.tsv

description: mappings from role to role type
DOI: 10.6084/m9.figshare.14680530
title: employer_classification_model_more_data.bin

description: Multilingual BERT model finetuned for the task of identifying the employer of a person behind a quote.
DOI: 10.6084/m9.figshare.14680530.v1
title: employer_classification_model_more_data.bin

description: Multilingual BERT model finetuned for the task of identifying the employer of a person behind a quote.
DOI: 10.6084/m9.figshare.14680557
title: Supplementary Material for: Analysis of axial length in young patients with Marfan syndrome and bilateral ectopia lentis by Z-scores

description: Medicine
DOI: 10.6084/m9.figshare.14680557.v1
title: Supplementary Material for: Analysis of axial length in young patients with Marfan syndrome and bilateral ectopia lentis by Z-scores

description: Medicine
DOI: 10.15468/q6vpj6
title: Two new species of the genus Blattochaeta Reitter, 1910 (Insecta, Coleoptera Leiodidae, Cholevinae, Leptodirini) from Montenegro

description: This dataset contains the digitized treatments in Plazi based on the original journal article Čeplík, Dávid, Lakota, Ján, Čeplík, Jaroslav (2021): Two new species of the genus Blattochaeta Reitter, 1910 (Insecta, Coleoptera Leiodidae, Cholevinae, Leptodirini) from Montenegro. Zootaxa 4969 (1): 86-100, DOI: https://doi.org/10.11646/zootaxa.4969.1.4
DOI: 10.5255/ukda-sn-854902
title: Speech Intonation Induces Enhanced Face Perception in Infants, 2014-2020

description: Infants’ preference for faces with direct compared to averted eye gaze, and for infant-directed over adult-directed speech, reflects early sensitivity to social communication. Here, we studied whether infant-directed speech (IDS), could affect the processing of a face with direct gaze in 4-month-olds. In a new ERP paradigm, the word ‘hello’ was uttered either in IDS or adult-direct speech (ADS) followed by an upright or inverted face. We show that the face-specific N290 ERP component was larger when faces were preceded by IDS relative to ADS. Crucially, this effect is specific to upright faces, whereas inverted faces preceded by IDS elicited larger attention-related P1 and Nc. These results suggest that IDS generates communicative expectations in infants. When such expectations are met by a following social stimulus – an upright face – infants are already prepared to process it. When the stimulus is a non-social one –inverted face – IDS merely increases general attention.
DOI: 10.15129/39b39651-8cc6-4c77-9fba-34d426121b95
title: Data for: "Hydraulic behaviour of fungal treated sand"

description: This dataset (in .xls formats) contain numeric data used for plotting the figures in the paper titled: 'hydraulic behaviour of fungal treated sand'.
DOI: 10.5281/zenodo.4809544
title: Multifrequency Doppler Sounding data & software (HAARP 06/04/14 experiments)

description: The raw data and software for repeating the results (figures) of HF Induced Modifications of the Electron Density Profile in the Earth’s Ionosphere Using the Pump Frequencies Near the Fourth Electron Gyroharmonic [HAARP 06/04/14 experiments]
DOI: 10.5281/zenodo.4809543
title: Multifrequency Doppler Sounding data & software (HAARP 06/04/14 experiments)

description: The raw data and software for repeating the results (figures) of HF Induced Modifications of the Electron Density Profile in the Earth’s Ionosphere Using the Pump Frequencies Near the Fourth Electron Gyroharmonic [HAARP 06/04/14 experiments]
DOI: 10.5281/zenodo.4808394
title: Postprocessed cloud radiative and microphysical output - ICON model

description: Asian monsoon region domain-mean storm-resolving simulation output. With increases in computing power and the advent of a new generation of models, we are now able to simulate the global climate system at storm-resolving resolutions of 2 km. Prototypes of such simulations show promising realism in clouds and precipitation, but shortcomings in their representation of microscale processes, like the interaction of cloud droplets and ice crystals with radiation, still restrict their utility. Here, we illustrate how changes to the ice microphysics scheme can dramatically alter both the vertical profile of cloud-radiative heating and top-of-atmosphere outgoing longwave radiation in storm-resolving simulations over the Asian monsoon region: Assorted ``ice microphysical switches" can alter upper-tropospheric cloud-radiative heating by a factor of four and domain-mean outgoing longwave radiation by 30 W m<sup>-2</sup>. Poorly-constrained parameters in the ice nucleation scheme, overactive conversion of ice to snow, and inconsistent treatment of ice crystal effective radius between microphysics and radiation all contribute to this large sensitivity in radiative outputs, whereas vertical resolution has a very limited impact. Even with deep convection explicitly simulated then, uncertainties in microscale cloud properties exert a strong control on the radiative budget that propagates to both atmospheric circulation and regional climate. These uncertainties need to be reduced to realize the full potential of storm-resolving models.
DOI: 10.5281/zenodo.4777769
title: Postprocessed cloud radiative and microphysical output - ICON model

description: Asian monsoon region domain-mean storm-resolving simulation output. With increases in computing power and the advent of a new generation of models, we are now able to simulate the global climate system at storm-resolving resolutions of 2 km. Prototypes of such simulations show promising realism in clouds and precipitation, but shortcomings in their representation of microscale processes, like the interaction of cloud droplets and ice crystals with radiation, still restrict their utility. Here, we illustrate how changes to the ice microphysics scheme can dramatically alter both the vertical profile of cloud-radiative heating and top-of-atmosphere outgoing longwave radiation in storm-resolving simulations over the Asian monsoon region: Assorted ``ice microphysical switches" can alter upper-tropospheric cloud-radiative heating by a factor of four and domain-mean outgoing longwave radiation by 30 W m<sup>-2</sup>. Poorly-constrained parameters in the ice nucleation scheme, overactive conversion of ice to snow, and inconsistent treatment of ice crystal effective radius between microphysics and radiation all contribute to this large sensitivity in radiative outputs, whereas vertical resolution has a very limited impact. Even with deep convection explicitly simulated then, uncertainties in microscale cloud properties exert a strong control on the radiative budget that propagates to both atmospheric circulation and regional climate. These uncertainties need to be reduced to realize the full potential of storm-resolving models.
DOI: 10.34740/kaggle/dsv/2273008
title: 2021 World Population (updated daily)
DOI: 10.34740/kaggle/dsv/2273015
title: COVID Vaccination in World (updated daily)
DOI: 10.6084/m9.figshare.14680569
title: Pediatric surgical services in Bangladesh during the COVID 19 pandemic: How they are affected and how to overcome the backlog, keeping healthcare professionals safe.

description: Background: Severe Acute Respiratory syndrome coronavirus 2 (SARS-CoV-2), which originated in Wuhan, China, has turned into a pandemic. All countries have implemented multiple strategies to try mitigating the losses caused by this virus. To stop the rapid spread of the disease and in compliance with the World Health Organizations social distancing policy, the government of Bangladesh has implemented a number of strategies, one of which is to limit the spread of the virus in hospitals by postponing elective procedures and providing only emergency services in the hospitals. The objective of this survey was to assess the current status of pediatric surgical procedures in different hospitals in Bangladesh and assess the effects of the current restrictions along with their implications in the long run. Materials and Methods: A survey was performed among doctors from public and private hospitals in Bangladesh to evaluate the status on pediatric surgery. Results: The results clearly revealed the lack of a significant reduction in doctors exposure to SARS-CoV-2 by postponing elective procedures. Conclusion: Keeping in mind the socioeconomic and health care conditions of the country, the author recommend resuming elective surgical procedures.
DOI: 10.6084/m9.figshare.14680569.v1
title: Pediatric surgical services in Bangladesh during the COVID 19 pandemic: How they are affected and how to overcome the backlog, keeping healthcare professionals safe.

description: Background: Severe Acute Respiratory syndrome coronavirus 2 (SARS-CoV-2), which originated in Wuhan, China, has turned into a pandemic. All countries have implemented multiple strategies to try mitigating the losses caused by this virus. To stop the rapid spread of the disease and in compliance with the World Health Organizations social distancing policy, the government of Bangladesh has implemented a number of strategies, one of which is to limit the spread of the virus in hospitals by postponing elective procedures and providing only emergency services in the hospitals. The objective of this survey was to assess the current status of pediatric surgical procedures in different hospitals in Bangladesh and assess the effects of the current restrictions along with their implications in the long run. Materials and Methods: A survey was performed among doctors from public and private hospitals in Bangladesh to evaluate the status on pediatric surgery. Results: The results clearly revealed the lack of a significant reduction in doctors exposure to SARS-CoV-2 by postponing elective procedures. Conclusion: Keeping in mind the socioeconomic and health care conditions of the country, the author recommend resuming elective surgical procedures.
DOI: 10.5281/zenodo.4400831
title: Raw and analyzed data to manuscript "Artificially aged spruce and beech wood surfaces reactivated using FE-DBD atmospheric plasma"

description: <strong>This dataset includes all raw and analyzed data as well as the supplementary information </strong> Related to the manuscript published: Authors: Žigon, J., Petič, M., Dahle, S. Title: <strong>Artificially aged spruce and beech wood surfaces reactivated using FE-DBD atmospheric plasma</strong> <em>Holzforschung</em> Vol. 73 Issue 12 Pages 1069-1081. DOI: 10.1515/hf-2019-0005 <strong>Please see README.txt for metadata.</strong>
DOI: 10.5281/zenodo.2645153
title: Raw and analyzed data to manuscript "Artificially aged spruce and beech wood surfaces reactivated using FE-DBD atmospheric plasma"

description: <strong>This dataset includes all raw and analyzed data as well as the supplementary information </strong> Related to the manuscript published: Authors: Žigon, J., Petič, M., Dahle, S. Title: <strong>Artificially aged spruce and beech wood surfaces reactivated using FE-DBD atmospheric plasma</strong> <em>Holzforschung</em> Vol. 73 Issue 12 Pages 1069-1081. DOI: 10.1515/hf-2019-0005 <strong>Please see README.txt for metadata.</strong>
DOI: 10.6084/m9.figshare.13029039.v2
title: Genomic epidemiology of emerging ESBL-producing <i>Salmonella</i> Kentucky <i>bla</i><sub>CTX-M-14b</sub> in Europe

description: Global dissemination of ciprofloxacin-resistant <i>Salmonella</i> Kentucky has been observed over the past decades. In recent years, there have been reports of extended-spectrum β-lactamase (ESBL) producing <i>S</i>. Kentucky. Routine surveillance at the European Centre for Disease Prevention and Control (ECDC) detected cases with a ciprofloxacin-resistant <i>S</i>. Kentucky with the ESBL-gene <i>bla</i><sub>CTX-M-14b</sub>. Ensuing research identified 78 cases in 2013–2018 in eight European countries. Compared to other <i>S</i>. Kentucky and non-typhoidal <i>Salmonella</i> infections, reported to the European Surveillance System, these cases were more likely to be elderly and to present urinary-tract infections. Bayesian time-scaled phylogeny on whole genome sequences of isolates from these cases and supplementary isolates from public sequence databases was used to infer the origin and spread of this clone. We dated the origin of the <i>bla</i><sub>CTX-M-14b</sub> clone to approximately 2005 in Northern Africa, most likely in Egypt. The geographic origin predicted by the phylogenetic analysis is consistent with the patients’ travel history. Next to multiple introductions of the clone to Europe from Egypt, our analysis suggests that in some parts of Europe the clone might have formed a stable population, from which further spread has occurred. Comparative genomics indicated that the <i>bla</i><sub>CTX-M-14b</sub> gene is present on the bacterial chromosome, within the type VI secretion system region. The <i>bla</i><sub>CTX-M-14b</sub> gene is integrated downstream of the <i>hcp1</i> gene, on a 2854 bp plasmid fragment containing also IS<i>Ecp1</i>. This is the first report of a chromosomally integrated CTX-M gene in <i>Salmonella</i> spp. in Europe, previous studies having identified similar genes only on plasmids.
DOI: 10.6084/m9.figshare.14671962
title: adhd2010

description: GWAS summary statistics from the Psychiatric Genomics Consortium (PGC)
DOI: 10.25345/c59n8w
title: MassIVE MSV000087519 - Bariatric surgery study (rat lymph glycoproteome)
title: Profiling of N-linked glycoproteomes in rat lymph before and after gastric bypass surgery. The cohort consisted of 68 lymph samples originating from rats before and after gastric bypass surgery (RYGB) or placebo surgery (SHAM). Samples were collected from rats before, 5 days, 10 days and 21 days after the operation. The samples for this study were processed using a Versette automated liquid handling system (ThermoFisher Scientific) in a 96-well plate format. The samples were measured in label free DDA mode and glycopeptides were quantified using Progenesis (Nonlinear Dynamics).
DOI: 10.15468/h56v9e
title: On the taxonomy and natural history of Oxypoda brachyptera and O. tarda (Coleoptera: Staphylinidae: Aleocharinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Assing, Volker (2012): On the taxonomy and natural history of Oxypoda brachyptera and O. tarda (Coleoptera: Staphylinidae: Aleocharinae). Beiträge Zur Entomologie = Contributions to Entomology 62 (6): 207-224, DOI: 10.21248/contrib.entomol.62.1.207-224, URL: http://dx.doi.org/10.21248/contrib.entomol.62.1.207-224
DOI: 10.6084/m9.figshare.14680602
title: Test AMP sequences

description: Fasta file containing invertebrate AMP sequences. Sequences were downloaded from the protein database of the National Center for Biotechnology Information (<i>NCBI Protein Database</i>, 2020; NCBI Resource Coordinators, 2018) and the Antimicrobial Peptide Database APD3 (Wang et al., 2016).
DOI: 10.6084/m9.figshare.14680602.v1
title: Test AMP sequences

description: Fasta file containing invertebrate AMP sequences. Sequences were downloaded from the protein database of the National Center for Biotechnology Information (<i>NCBI Protein Database</i>, 2020; NCBI Resource Coordinators, 2018) and the Antimicrobial Peptide Database APD3 (Wang et al., 2016).
DOI: 10.5255/ukda-sn-854878
title: A Study on Recruiting and Supporting Men in Early Years Education, 2018-2020

description: As part of the GenderEYE Study on recruiting and supporting men in early years education at Lancaster University and the Fatherhood Institute, researchers conducted interviews with a number of key figures within the early years world. These included members of EYs advocacy groups/organisations, EYs consultants, teacher trainers, local government bodies, careers advisers and employment services. The aim of the data collection was to find out why there are so few men working in early years; how to attract more men into this sector, and the best ways to support those men that choose to become EY practitioners.
DOI: 10.6084/m9.figshare.12605273
title: SNF_CanopyGap_LightExperiment

description: Data from 180 seedlings from 3 N-fixing legume species (n=540) grown in both Neotropical canopy-gaps and intact understory to test light and soil N effects on symbiotic nitrogen fixation. Data include biomass, SNF rate estimates derived from 15N enriched incubations, and average site variables (average % light availability, soil nitrate, soil phosphate, and soil moisture).
DOI: 10.6084/m9.figshare.14680614
title: Test non-AMP sequences

description: Fasta file containing invertebrate non-AMP amino acid sequences. Sequences were downloaded from the UniProt database (The UniProt Consortium, 2019).
DOI: 10.6084/m9.figshare.14680614.v1
title: Test non-AMP sequences

description: Fasta file containing invertebrate non-AMP amino acid sequences. Sequences were downloaded from the UniProt database (The UniProt Consortium, 2019).
DOI: 10.15468/ytvhvs
title: Revision der Gattung Agachila D & G - M, 1954 (Hemiptera: Heteroptera: Tingidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article - (2012): Revision der Gattung Agachila D & G - M, 1954 (Hemiptera: Heteroptera: Tingidae). Beiträge Zur Entomologie = Contributions to Entomology 62 (6): 235-246, DOI: 10.21248/contrib.entomol.62.1.235-246
DOI: 10.6084/m9.figshare.14680629
title: AMP ID table

description: Original and custom ID codes for the used AMP sequences.<br>
DOI: 10.6084/m9.figshare.14680629.v1
title: AMP ID table

description: Original and custom ID codes for the used AMP sequences.<br>