cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc1ldmby
title: CCDC 1471890: Experimental Crystal Structure Determination

description: Related Article: Xu-Hong Hu,  Xiao-Fei Yang,  and Teck-Peng Loh|2016|ACS Catalysis|6|5930|doi:10.1021/acscatal.6b02015
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjshf
title: CCDC 1505685: Experimental Crystal Structure Determination

description: Related Article: Marta M. Andrade, Rafaela A. L. Silva, Isabel C. Santos, Elsa B. Lopes, Sandra Rabaça, Laura C. J. Pereira, Joana T. Coutinho, João P. Telo, Concepció Rovira, Manuel Almeida, Dulce Belo|2017|Inorg.Chem.Front.|4|270|doi:10.1039/C6QI00447D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.26036/cnp0008276
title: phytoplasma sequences

description: Areca palm yellow leaf phytoplasma sequences
DOI: 10.26036/cnp0008284
title: Inactivated Vibrio harveyi Vaccine for Litopenaeus vannamei Intestinal Microbiota

description: Inactivated Vibrio harveyi Vaccine for Litopenaeus vannamei Intestinal Microbiota
DOI: 10.20387/bonares-bkje-vb72
title: BonaRes-SIGNAL crop, wood, and leaf biomass production, carbon and nitrogen contents in wood and leaf litter (2018-2023) 

description: This data set contains grain, shredded corn, and potato yield; wood biomass and leaf litter production; carbon contents in wood and leaf litter; and nitrogen content in leaf litter on the sites of SIGNAL (Sustainable Intensification of Agriculture through Agroforestry) at Dornburg (Thuringia) and Vechta (Lower Saxony) from 2018 to 2023. 
Research question: How does long-term crop and wood production respond to variation in soil types and tree age in temperate agroforestry systems? (2) What is the effect of tree age on spring and winter crop yields between AF and OC? This table contains the index of all tables forming this data collection.

Related datasets are listed in the metadata element 'Related Identifier'.
Dataset version 1.0
DOI: 10.15468/dl.st48t4
title: Occurrence Download

description: A dataset containing 9417 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lysimachia terrestris",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 {
 "or" : [
 "Country is Canada",
 "Country is United States of America"
 ]
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 9417 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054120-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d9zzs5
title: Occurrence Download

description: A dataset containing 9735 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-80.42509 38.67093,-71.71035 38.67093,-71.71035 45.16548,-80.42509 45.16548,-80.42509 38.67093))",
 "HasCoordinate is true",
 "TaxonKey is Cygnus olor"
 ]
}

 The dataset includes 9735 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054121-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28757048
title: <b>Interpretable Aging Signatures in Human Retinal Cell Types Revealed by Single-Cell RNA Sequencing and Sparse Logistic Regression</b>

description: <b>Purpose. </b>This study aims to characterize the age-dependent transcriptional and cellular landscape of the human retina using single-cell RNA sequencing (scRNA-seq) in a Chinese cohort, with a focus on identifying conserved and cell-type-specific aging signatures. Additionally, it investigates how diabetic retinopathy (DR) accelerates or modifies normal aging processes in retinal tissues.<b>Methods</b>. Our cohort comprised 18 retinal samples from 13 Chinese donors (8 male, 5 female, ages 34–92 years), stratified into young (34-55 years) and old (68-92 years) groups. Samples were collected from both living donors and cadaveric sources without frozen, with balanced representation of diabetic status (7 DR, 3 diabetics without retinopathy, 8 non-diabetic). The whole retinal tissue without selective regional dissection was used to avoid sampling bias, with subsequent analysis focusing on photoreceptors, interneurons, and glial cells.<b>Results. </b>Aging was associated with shifts in retinal cellular composition, including a decreased rod-to-cone ratio, reduced bipolar cell proportions among interneurons, and increased astrocyte proportions within glial populations. Müller glial cells exhibited the most pronounced transcriptional changes, with upregulation of inflammatory mediators (e.g., <i>CXCL1/2</i>) and matrix remodeling genes (e.g., <i>LOX</i>). Conserved aging hallmarks included mitochondrial dysfunction (e.g., <i>MT-ND4/5/6</i> downregulation) and inflammatory activation across multiple cell types. DR amplified these changes, particularly in synaptic signaling and inflammatory pathways. Transcriptional regulatory analysis revealed conserved activation of stress-responsive regulators (e.g., <i>BHLHE40</i>) alongside cell-type-specific dysregulation.<b>Conclusions.</b> This study provides a comprehensive characterization of age-related transcriptional and cellular changes in the human retina, revealing both conserved molecular hallmarks and unique cell-type-specific vulnerabilities. By including a Chinese cohort and stratifying by disease status, we highlight how DR amplifies aging-related inflammatory signaling and synaptic remodeling, offering critical insights into potential therapeutic targets for mitigating retinal degeneration across diverse populations.
DOI: 10.6084/m9.figshare.28757048.v2
title: <b>Interpretable Aging Signatures in Human Retinal Cell Types Revealed by Single-Cell RNA Sequencing and Sparse Logistic Regression</b>

description: <b>Purpose. </b>This study aims to characterize the age-dependent transcriptional and cellular landscape of the human retina using single-cell RNA sequencing (scRNA-seq) in a Chinese cohort, with a focus on identifying conserved and cell-type-specific aging signatures. Additionally, it investigates how diabetic retinopathy (DR) accelerates or modifies normal aging processes in retinal tissues.<b>Methods</b>. Our cohort comprised 18 retinal samples from 13 Chinese donors (8 male, 5 female, ages 34–92 years), stratified into young (34-55 years) and old (68-92 years) groups. Samples were collected from both living donors and cadaveric sources without frozen, with balanced representation of diabetic status (7 DR, 3 diabetics without retinopathy, 8 non-diabetic). The whole retinal tissue without selective regional dissection was used to avoid sampling bias, with subsequent analysis focusing on photoreceptors, interneurons, and glial cells.<b>Results. </b>Aging was associated with shifts in retinal cellular composition, including a decreased rod-to-cone ratio, reduced bipolar cell proportions among interneurons, and increased astrocyte proportions within glial populations. Müller glial cells exhibited the most pronounced transcriptional changes, with upregulation of inflammatory mediators (e.g., <i>CXCL1/2</i>) and matrix remodeling genes (e.g., <i>LOX</i>). Conserved aging hallmarks included mitochondrial dysfunction (e.g., <i>MT-ND4/5/6</i> downregulation) and inflammatory activation across multiple cell types. DR amplified these changes, particularly in synaptic signaling and inflammatory pathways. Transcriptional regulatory analysis revealed conserved activation of stress-responsive regulators (e.g., <i>BHLHE40</i>) alongside cell-type-specific dysregulation.<b>Conclusions.</b> This study provides a comprehensive characterization of age-related transcriptional and cellular changes in the human retina, revealing both conserved molecular hallmarks and unique cell-type-specific vulnerabilities. By including a Chinese cohort and stratifying by disease status, we highlight how DR amplifies aging-related inflammatory signaling and synaptic remodeling, offering critical insights into potential therapeutic targets for mitigating retinal degeneration across diverse populations.
DOI: 10.6084/m9.figshare.28757048.v3
title: <b>Interpretable Aging Signatures in Human Retinal Cell Types Revealed by Single-Cell RNA Sequencing and Sparse Logistic Regression</b>

description: <b>Purpose. </b>This study aims to characterize the age-dependent transcriptional and cellular landscape of the human retina using single-cell RNA sequencing (scRNA-seq) in a Chinese cohort, with a focus on identifying conserved and cell-type-specific aging signatures. Additionally, it investigates how diabetic retinopathy (DR) accelerates or modifies normal aging processes in retinal tissues.<b>Methods</b>. Our cohort comprised 18 retinal samples from 13 Chinese donors (8 male, 5 female, ages 34–92 years), stratified into young (34-55 years) and old (68-92 years) groups. Samples were collected from both living donors and cadaveric sources without frozen, with balanced representation of diabetic status (7 DR, 3 diabetics without retinopathy, 8 non-diabetic). The whole retinal tissue without selective regional dissection was used to avoid sampling bias, with subsequent analysis focusing on photoreceptors, interneurons, and glial cells.<b>Results. </b>Aging was associated with shifts in retinal cellular composition, including a decreased rod-to-cone ratio, reduced bipolar cell proportions among interneurons, and increased astrocyte proportions within glial populations. Müller glial cells exhibited the most pronounced transcriptional changes, with upregulation of inflammatory mediators (e.g., <i>CXCL1/2</i>) and matrix remodeling genes (e.g., <i>LOX</i>). Conserved aging hallmarks included mitochondrial dysfunction (e.g., <i>MT-ND4/5/6</i> downregulation) and inflammatory activation across multiple cell types. DR amplified these changes, particularly in synaptic signaling and inflammatory pathways. Transcriptional regulatory analysis revealed conserved activation of stress-responsive regulators (e.g., <i>BHLHE40</i>) alongside cell-type-specific dysregulation.<b>Conclusions.</b> This study provides a comprehensive characterization of age-related transcriptional and cellular changes in the human retina, revealing both conserved molecular hallmarks and unique cell-type-specific vulnerabilities. By including a Chinese cohort and stratifying by disease status, we highlight how DR amplifies aging-related inflammatory signaling and synaptic remodeling, offering critical insights into potential therapeutic targets for mitigating retinal degeneration across diverse populations.
DOI: 10.5517/ccdc.csd.cc1mjsjg
title: CCDC 1505686: Experimental Crystal Structure Determination

description: Related Article: Marta M. Andrade, Rafaela A. L. Silva, Isabel C. Santos, Elsa B. Lopes, Sandra Rabaça, Laura C. J. Pereira, Joana T. Coutinho, João P. Telo, Concepció Rovira, Manuel Almeida, Dulce Belo|2017|Inorg.Chem.Front.|4|270|doi:10.1039/C6QI00447D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjskh
title: CCDC 1505687: Experimental Crystal Structure Determination

description: Related Article: Marta M. Andrade, Rafaela A. L. Silva, Isabel C. Santos, Elsa B. Lopes, Sandra Rabaça, Laura C. J. Pereira, Joana T. Coutinho, João P. Telo, Concepció Rovira, Manuel Almeida, Dulce Belo|2017|Inorg.Chem.Front.|4|270|doi:10.1039/C6QI00447D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjslj
title: CCDC 1505688: Experimental Crystal Structure Determination

description: Related Article: Marta M. Andrade, Rafaela A. L. Silva, Isabel C. Santos, Elsa B. Lopes, Sandra Rabaça, Laura C. J. Pereira, Joana T. Coutinho, João P. Telo, Concepció Rovira, Manuel Almeida, Dulce Belo|2017|Inorg.Chem.Front.|4|270|doi:10.1039/C6QI00447D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjsmk
title: CCDC 1505689: Experimental Crystal Structure Determination

description: Related Article: Marta M. Andrade, Rafaela A. L. Silva, Isabel C. Santos, Elsa B. Lopes, Sandra Rabaça, Laura C. J. Pereira, Joana T. Coutinho, João P. Telo, Concepció Rovira, Manuel Almeida, Dulce Belo|2017|Inorg.Chem.Front.|4|270|doi:10.1039/C6QI00447D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjsnl
title: CCDC 1505690: Experimental Crystal Structure Determination

description: Related Article: Marta M. Andrade, Rafaela A. L. Silva, Isabel C. Santos, Elsa B. Lopes, Sandra Rabaça, Laura C. J. Pereira, Joana T. Coutinho, João P. Telo, Concepció Rovira, Manuel Almeida, Dulce Belo|2017|Inorg.Chem.Front.|4|270|doi:10.1039/C6QI00447D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjspm
title: CCDC 1505691: Experimental Crystal Structure Determination

description: Related Article: Marta M. Andrade, Rafaela A. L. Silva, Isabel C. Santos, Elsa B. Lopes, Sandra Rabaça, Laura C. J. Pereira, Joana T. Coutinho, João P. Telo, Concepció Rovira, Manuel Almeida, Dulce Belo|2017|Inorg.Chem.Front.|4|270|doi:10.1039/C6QI00447D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjsqn
title: CCDC 1505692: Experimental Crystal Structure Determination

description: Related Article: Marta M. Andrade, Rafaela A. L. Silva, Isabel C. Santos, Elsa B. Lopes, Sandra Rabaça, Laura C. J. Pereira, Joana T. Coutinho, João P. Telo, Concepció Rovira, Manuel Almeida, Dulce Belo|2017|Inorg.Chem.Front.|4|270|doi:10.1039/C6QI00447D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjsrp
title: CCDC 1505693: Experimental Crystal Structure Determination

description: Related Article: Marta M. Andrade, Rafaela A. L. Silva, Isabel C. Santos, Elsa B. Lopes, Sandra Rabaça, Laura C. J. Pereira, Joana T. Coutinho, João P. Telo, Concepció Rovira, Manuel Almeida, Dulce Belo|2017|Inorg.Chem.Front.|4|270|doi:10.1039/C6QI00447D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjs64
title: CCDC 1505676: Experimental Crystal Structure Determination

description: Related Article: Naveen, Srinivasarao Arulananda Babu|2016|Tetrahedron Lett.|57|5801|doi:10.1016/j.tetlet.2016.11.046
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjs75
title: CCDC 1505677: Experimental Crystal Structure Determination

description: Related Article: Naveen, Srinivasarao Arulananda Babu|2016|Tetrahedron Lett.|57|5801|doi:10.1016/j.tetlet.2016.11.046
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjs86
title: CCDC 1505678: Experimental Crystal Structure Determination

description: Related Article: Naveen, Srinivasarao Arulananda Babu|2016|Tetrahedron Lett.|57|5801|doi:10.1016/j.tetlet.2016.11.046
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjs97
title: CCDC 1505679: Experimental Crystal Structure Determination

description: Related Article: Naveen, Srinivasarao Arulananda Babu|2016|Tetrahedron Lett.|57|5801|doi:10.1016/j.tetlet.2016.11.046
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjsb8
title: CCDC 1505680: Experimental Crystal Structure Determination

description: Related Article: Naveen, Srinivasarao Arulananda Babu|2016|Tetrahedron Lett.|57|5801|doi:10.1016/j.tetlet.2016.11.046
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjssq
title: CCDC 1505694: Experimental Crystal Structure Determination

description: Related Article: Assi Al Mousawi, Anthony Kermagoret, Davy-Louis Versace, Joumana Toufaily, Tayssir Hamieh, Bernadette Graff, Frederique Dumur, Didier Gigmes, Jean Pierre Fouassier and Jacques Lalevée|2017|Polym.Chem.|8|568|doi:10.1039/C6PY01958G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjsvs
title: CCDC 1505696: Experimental Crystal Structure Determination

description: Related Article: H.-F.Wang, K.-H.Yih, C.-H.Yang, G.-H.Lee, K.-F.Huang|2018|Zh.Strukt.Khim.||961|doi:10.159134/S0022476618040315
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjswt
title: CCDC 1505697: Experimental Crystal Structure Determination

description: Related Article: H.-F.Wang, K.-H.Yih, C.-H.Yang, G.-H.Lee, K.-F.Huang|2018|Zh.Strukt.Khim.||961|doi:10.159134/S0022476618040315
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mjstr
title: CCDC 1505695: Experimental Crystal Structure Determination

description: Related Article: Dong Jun Kim,  Keith R. Hermann,  Aleksandrs Prokofjevs,  Michael T. Otley,  Cristian Pezzato,  Magdalena Owczarek,  and J. Fraser Stoddart|2017|J.Am.Chem.Soc.|139|6635|doi:10.1021/jacs.7b01209
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1llw57
title: CCDC 1477899: Experimental Crystal Structure Determination

description: Related Article: Ioana Knopf, Daniel Tofan, Dirk Beetstra, Abdulaziz Al-Nezari, Khalid Al-Bahily, Christopher C. Cummins|2017|Chemical Science|8|1463|doi:10.1039/C6SC03614G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.