cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.j8058/1
title: White stork parent-offspring behavioural data

description: Field data collected from video recordings at natural and experimental feeding events. The Excel file contains 5 sheets: variables for whole broods during natural feeding events (Brood data), variables for individual nestlings at natural feeding events (Nestling Behaviour), variables for individual nestlings at experimental feeding events including chick roles during tugs-of-war (1=winner) and assaults (1=actor) (Experimental feeding), occurrence of food disputes at broods (Food disputes) and chick mass and length of the largest food item at natural broods (Prey size)
DOI: 10.5061/dryad.km140/1
title: Calcium imaging data from V1, PPC, and fMC during visual delayed response task
DOI: 10.5061/dryad.m35k6/52
title: ModelSel_SWTH_2013_Detection

description: AIC model selection table and associated coefficients for Swainson's thrush 2013 for all detection models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.m35k6/53
title: ModelSel_VATH_2012_Detection

description: AIC model selection table and associated coefficients for varied thrush 2012 for all detection models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.m35k6/54
title: ModelSel_VATH_2013_Detection

description: AIC model selection table and associated coefficients for varied thrush 2013 for all detection models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.m35k6/55
title: ModelSel_WETA_2012_Detection

description: AIC model selection table and associated coefficients for western tanager 2012 for all detection models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.m35k6/56
title: ModelSel_WETA_2013_Detection

description: AIC model selection table and associated coefficients for western tanager 2013 for all detection models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.m35k6/57
title: ModelSel_WIWA_2012_Detection

description: AIC model selection table and associated coefficients for Wilson's warbler 2012 for all detection models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.m35k6/58
title: ModelSel_WIWA_2013_Detection

description: AIC model selection table and associated coefficients for Wilson's warbler 2013 for all detection models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.m35k6/59
title: ModelSel_BRCR_2012_Occupancy

description: AIC model selection table and associated coefficients for brown creeper 2012 for all initial occupancy models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.p1k64/3
title: Orsini etal_LRV_Unhatched_neutral_micros

description: microsatellite genotyping results of the samples collected from the sediment core LRV (Lake Ring, Denmark). The data in this file were obtained from genotyping  D. magna resting eggs. Individual ID, location of the samples and the stress condition in nature are shown.  -9 indicates missing values.
DOI: 10.5061/dryad.pp6k7/1
title: Lifespan data

description: Lifespan data for ms published in Biology Letters "Inbreeding removes sex differences in lifespan in a population of Drosophila melanogaster." This is a .csv file with the following variables (see ms for details): Set, Inbreeding treatment, Sex, Lifespan (in days), Social environment treatment, and whether the individual had to be censored (Censor = 0; in which case lifespan = day in which this happened) or not (Censor = 1).
DOI: 10.5061/dryad.r44rh/1
title: FT-ICR-MS_data

description: This excel file contains all FT-ICR-MS data, including the molecular formula assignments of each m/z peak.
DOI: 10.5061/dryad.r44rh/2
title: EEM-PARAFAC_data

description: This excel file contains the true scores (Fmax) of the EEM-PARAFAC model.
DOI: 10.5061/dryad.rt201/5
title: Guide To Environmental & Spatial Variables

description: Description of environmental and spatial variables including units of measurement
DOI: 10.5061/dryad.t63mn/1
title: Macías-Hernandez et al (2016), Zookeys, Species Distribution Maps

description: Distributional map of each species of Dysdera (alphabetically ordered)
DOI: 10.5061/dryad.t63mn/2
title: Macías-Hernandez et al (2016), Zookeys, Species Distribution Table

description: Distribution of each Dysdera species, indicating species name, locality, district, island, type of habitat, geographic coordinates, and altitude (m).
DOI: 10.17632/p2z6rtcf8j.1
title: Patchiness of forest landscape can predict species distribution better than abundance: the case of a forest-dwelling passerine, the short-toed treecreeper, in central Italy.

description: The t
DOI: 10.5061/dryad.12422/1
title: body temperature at different ambient temperatures

description: Meta dataDate = dateTime = time of captureTime100 = time of capture expressed as decimalsSpecies = full-length names of the species can be found in Table 1 of the paperArt = numbered code for each speciesRingno = Ring numberT1°C; T2°C; T3°C = The three independent readings of body temperature taken during a time span of 10 s.T°C = average body temperatureAmbient T = Ambient temperature at the time of captureWing length = wing lengthTarsus length = tarsus lengthMass = mass
DOI: 10.5061/dryad.1s3d4/1
title: Supplementary Files: Dietary responses of Sahul (Pleistocene Australia-New Guinea) megafauna to climate and environmental change

description: Supplementary Figures 1-6, Supplementary Tables 1-14.
DOI: 10.5061/dryad.4p55b/1
title: AP RAVI_Outcomes_gee
DOI: 10.5061/dryad.54ht3/1
title: Surrounding plant community and soil measurements

description: A detailed description of the field experiment is presented in the article. At the end of August 2011, plant community measurements were made in each plot, to estimate the structural complexity of the community. For each plant community, the percentage cover of plant species was recorded in two 1 m2 quadrants along a diagonal transect within each plot. The total percentage cover can exceed 100% because plants in a community can overlap. The height of the vegetation was measured using the vertical drop disc method (Stewart et al. 2001). The disc weighed 200 g, had a diameter of 300 mm, and was released from a 1.5-m height. The height was measured at 10 random locations within each plot. One week after plant sampling, soil cores of 15 cm depth and 2.5 cm diameter were collected from each experimental plot at five random positions. The soil samples were pooled per plot and used for chemical analysis. Mineral N content (NH4+ and NO3) in soil samples was determined colorimetrically in the CaCl2 extraction using a Traacs 800 autoanalyser (TechniCon Systems Inc, USA). The C:N-ratio in soil samples was measured on a FlashEA 1112 Series NC soil analyser (Thermo Scientific). pH was measured in 2:5 dry soil : water suspensions. The percentage organic C was determined according to Nelson and Sommers (1982) and available P according to Olsen et al. (1954) and measured at 720 nm.
DOI: 10.5061/dryad.54ht3/2
title: Arthropod database 2011

description: A detailed description of the field experiment is presented in the article. Arthropods at all stages of their development (eggs, immature and adults) on each Jacobaea vulgaris plant were collected on four occasions from May to August 2011. During each collection, all plants were carefully inspected between 10:00 am and 16:00 pm and all arthropods that were observed on a plant were collected using an aspirator by three collectors distributed evenly over the field. Each collector inspected all 1324 plants, spending an approximately equal amount of time at each plant at all diversity levels. All arthropods were stored individually in 70% ethanol in labelled Eppendorf tubes. Most arthropods were identified to species or family level. All arthropod species were assigned to feeding group (specialist herbivore, generalist herbivore, predator, pollinator, detritivore and omnivore) based on their feeding strategy and the degree of specialization.
DOI: 10.5061/dryad.54ht3/3
title: PA content J. vulgaris

description: PA analysis of leaf and root samples was carried out using liquid chromatography-tandem mass spectrometry (LC-MS/MS) following the procedure outlined in Kostenko et al. (2013). In brief, 5 mg of freeze-dried ground plant material was extracted with 0.5 ml 2% formic acid solution containing heliotrine (1 µg•ml-1) as internal standard. After centrifugation and filtration, 25 µl of the extracted filtrate was diluted with 975 µl of 10 mM ammonium hydroxide solution and 10 µl was injected in a Waters Acquity ultra-performance chromatographic system coupled to a Waters Quattro Premier tandem mass spectrometer (Waters, Milford, MA, USA). Separation and mass spectrometric detection of the PAs was as described in Cheng et al. (2011) and Appendix S2. Data were processed using Masslynx 4.1 software.
DOI: 10.5061/dryad.54ht3/4
title: Jacobaea vulgaris_characteristics 2011

description: A detailed description of the field experiment and plant measurements are presented in the article. Leaf carbon (C) and nitrogen (N) concentrations were determined using a Flash EA1112 CN analyser (Interscience, Breda, The Netherlands).
DOI: 10.5061/dryad.585fd/1
title: 1 - Control - without enzyme

description: Properties of pulp and paper for samles not treated with enzyme
DOI: 10.5061/dryad.585fd/2
title: 2 - Cellulase

description: Properties of pulp and paper treated by Aspergillus sp. cellulase
DOI: 10.5061/dryad.585fd/3
title: 3 - NS-22086

description: Properties of pulp and paper treated with NS-22086
DOI: 10.5061/dryad.585fd/4
title: 4 - Xylanase

description: Properties of pulp and paper treated by T. lanuginosus xylanase
DOI: 10.5061/dryad.5pv1k/1
title: ForDryadAln

description: The file is the alignment of the ITS and trnLF loci from the following species: Arabidopsis thaliana, Arabidopsis lyrata, Arabis montbretiana, Arabis alpina, Draba hispanica, Draba nemorosa, Arabis verna and Aubrieta parviflora.  This alignment was used to make the phylogeny in the associated paper
DOI: 10.5061/dryad.65vk4/1
title: Results2015
DOI: 10.5061/dryad.67136/1
title: Long-term observational data

description: Observational data on sand lizard badge size, body mass and snout vent length, and number of ectoparasites.
DOI: 10.5061/dryad.67136/2
title: Early-season badge size

description: Measurements of sand lizard badge size, body morphology, corticosterone, and ectoparasites taken early in the season near the time of badge formation.
DOI: 10.5061/dryad.6fq75/1
title: AstoriaCountData_Obs&Pred

description: Columns are time in weeks, predicted number of sea lions at Astoria using B-splines of order 6 (PredCount), and observed weekly counts (ObsCount).
DOI: 10.5061/dryad.6fq75/2
title: post2008Matrix

description: Association matrix from 2008 and on
DOI: 10.5061/dryad.6fq75/3
title: Pre2008Matrix

description: Association matrix prior to 2008
DOI: 10.5061/dryad.6fq75/4
title: asoc2_dryad

description: Association matrix for the entire time frame
DOI: 10.5061/dryad.6m668/2
title: Present Bioclim

description: Variables used to quantify the present climate and topography of units within Peninsular India and Sri Lanka. Provided data include the bioclimatic variables ('bio1' to 'bio19'), as extracted from the 'WorldClim' database (for definitions see: http://www.worldclim.org/bioclim). Further information about WorldClim at Hijmans, R.J., S.E. Cameron, J.L. Parra, P.G. Jones and A. Jarvis, 2005. Very high resolution interpolated climate surfaces for global land areas. International Journal of Climatology 25: 1965-1978. http://dx.doi.org/10.1002/joc.1276. The variables Altitude-MIN, Altitude-MAX, and Range are from the Shuttle Radar Topography Mission. Data available from the U.S. Geological Survey.
DOI: 10.5061/dryad.6m668/3
title: Mid-Holocene

description: Variables used to quantify the mid- Holocene climate and topography of units within Peninsular India and Sri Lanka. Provided data include the bioclimatic variables ('mb1' to 'mb19'), as extracted from the 'WorldClim' database (for definitions see: http://www.worldclim.org/bioclim). Further information about WorldClim at Hijmans, R.J., S.E. Cameron, J.L. Parra, P.G. Jones and A. Jarvis, 2005. Very high resolution interpolated climate surfaces for global land areas. International Journal of Climatology 25: 1965-1978. http://dx.doi.org/10.1002/joc.1276. The variables Altitude-MIN, Altitude-MAX, and Range are from the Shuttle Radar Topography Mission. Data available from the U.S. Geological Survey.
DOI: 10.5061/dryad.6m668/4
title: LGM

description: Variables used to quantify the climate and topography of Peninsular India and Sri Lanka during the Last Glacial Maxima. Provided data include the bioclimatic variables ('lgm1' to 'lgm19'), as extracted from the 'WorldClim' database (for definitions see: http://www.worldclim.org/bioclim). Further information about WorldClim at Hijmans, R.J., S.E. Cameron, J.L. Parra, P.G. Jones and A. Jarvis, 2005. Very high resolution interpolated climate surfaces for global land areas. International Journal of Climatology 25: 1965-1978. http://dx.doi.org/10.1002/joc.1276. The variables Altitude-MIN, Altitude-MAX, and Range are from the Shuttle Radar Topography Mission. Data available from the U.S. Geological Survey.
DOI: 10.5061/dryad.6nd54/1
title: 3D Genepop File

description: Genepop file (3 digit) containing raw microsatellite data used for all analyses.
DOI: 10.5061/dryad.73ff4/2
title: DATASET CHILDREN IN THE SYRIAN CIVIL WAR
DOI: 10.5061/dryad.8jn67/1
title: Physiology_Corallina Adults

description: Data set includes net photosynthesis, gross photosynthesis and respiration of Corallina vancouveriensis from four different sites in California and exposed to two different pCO2 levels.
DOI: 10.5061/dryad.8jn67/2
title: Pigments Corallina Adults

description: Data set includes pigment content of Corallina vancouveriensis from four different sites in California and exposed to two different pCO2 levels.
DOI: 10.5061/dryad.8jn67/3
title: Relative Growth Rate Corallina Adults

description: Data set includes relative growth rate of Corallina vancouveriensis from four different sites in California and exposed to two different pCO2 levels.
DOI: 10.5061/dryad.8jn67/4
title: Mortaility_Corallina_Spores

description: Data set includes mortality of spores Corallina vancouveriensis from four different sites in California and exposed to two different pCO2 levels.
DOI: 10.5061/dryad.8jn67/5
title: Growth Corallina Spores

description: Data set includes growth of Corallina vancouveriensis from four different sites in California and exposed to two different pCO2 levels.
DOI: 10.5061/dryad.c6214/1
title: Quantitative trait simulator

description: Provided python scripts enable simulations of quantitative trait evolution to a new fitness optimum using forward simulations in diploids assuming random mating and free recombination between loci. For further details see associated publication.
DOI: 10.5061/dryad.c9b2p/1
title: HatchlingData

description: Hatchling phenotypic data presented according to parental basking treatment
DOI: 10.5061/dryad.c9b2p/2
title: FemaleData

description: Reproductive success of females according to basking treatment
DOI: 10.5061/dryad.c9b2p/3
title: ClutchData

description: Clutch data according to basking treatment
DOI: 10.5061/dryad.ch576/1
title: Greenland eDNA raw sequencing data

description: This contains the raw fastq files from eDNA sequencing from the study. Data is Illumina MiSeq paird-end in four libraries.
DOI: 10.5061/dryad.d875g/1
title: FL-SC Coastal Die off Survey

description: Data on the size of die-offs and patch distribution within those dieoffs observed at marsh sites located along the southeastern US coastline
DOI: 10.5061/dryad.d875g/2
title: DieOff Recovery 2012-15

description: Data on the area of marsh die offs on Sapelo Island Georgia in 2012 and in 2015, after 3 years of recovery. Data on the patch density within each die off is also included
DOI: 10.5061/dryad.d875g/3
title: Mussel Addition Experiment: Ammonium Salinity Expansion Data

description: Data from a 2012 mussel addition experiment showing the concentration of ammonia and porewater salinity in cordgrass transplants either with mussels added or not added. In addition, data on the expansion (number of new tillers) observed after 8 months.
DOI: 10.5061/dryad.d875g/4
title: Salinity Well Pairs

description: Salinity data from pairs of wells either location inside mussel mounds or in the adjacent marsh without mussels; data were collected nearly weekly from May - August 2013
DOI: 10.5061/dryad.m35k6/60
title: ModelSel_BRCR_2013_Occupancy

description: AIC model selection table and associated coefficients for brown creeper 2013 for all initial occupancy models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.m35k6/61
title: ModelSel_CBCH_2012_Occupancy

description: AIC model selection table and associated coefficients for chestnut-backed chickadee 2012 for all initial occupancy models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.
DOI: 10.5061/dryad.m35k6/62
title: ModelSel_CBCH_2013_Occupancy

description: AIC model selection table and associated coefficients for chestnut-backed chickadee 2013 for all initial occupancy models. Column names for the model coefficients use the following notation: coefficient = parameter(covariate) and standard error = SEparameter(covariate). Parameter abbreviations are p = detection probability, psi = initial occupancy, col = colonization/settlement, ext = extinction/vacancy. Parameter(Int) refers to the intercept. ‘nPars’ is the number of parameters estimated in the model. Each model is ranked by its AIC score, which represents how well the model fits the data. A lower ∆AIC (delta) value is indicative of a better model. The probability that the model (of the models tested) would best explain the data is indicated by AICwt.