cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6491891
title: MapOSR - A Mapping Review Dataset of Empirical Studies on Open Science

description: Research that investigates respective researchers’ engagement in Open Science varies widely in the topics addressed, methods employed, and disciplines investigated, which makes it difficult to integrate and compare its results. To investigate current outcomes of Open Science research, and to get a better understanding on topicswell-researched and on research gaps we aim at providing an openly accessible overview of empirical studies that focus on different aspects of Open Science in different scientific disciplines, academic groups and geographical regions. The present data set of studies about Open Science practices was retrieved following a PRISM approach to compile a literature review. We include studies from the Scopus and Web of Science databases with keywords relating to Open Science between the years 2000 and 2020, as well as a snowball search for relevant articles. Studies that did not investigate any aspect of Open Science, or weren’t peer reviewed were excluded, resulting in a total of 695 remaining studies. The data set was collaboratively annotated to ensure intercoder reliability of the coded data.
DOI: 10.5281/zenodo.6491890
title: MapOSR - A Mapping Review Dataset of Empirical Studies on Open Science

description: Research that investigates respective researchers’ engagement in Open Science varies widely in the topics addressed, methods employed, and disciplines investigated, which makes it difficult to integrate and compare its results. To investigate current outcomes of Open Science research, and to get a better understanding on topicswell-researched and on research gaps we aim at providing an openly accessible overview of empirical studies that focus on different aspects of Open Science in different scientific disciplines, academic groups and geographical regions. The present data set of studies about Open Science practices was retrieved following a PRISM approach to compile a literature review. We include studies from the Scopus and Web of Science databases with keywords relating to Open Science between the years 2000 and 2020, as well as a snowball search for relevant articles. Studies that did not investigate any aspect of Open Science, or weren’t peer reviewed were excluded, resulting in a total of 695 remaining studies. The data set was collaboratively annotated to ensure intercoder reliability of the coded data.
DOI: 10.5517/ccdc.csd.cc28d5rm
title: CCDC 2097080: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d5sn
title: CCDC 2097081: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d5tp
title: CCDC 2097082: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d5vq
title: CCDC 2097083: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d5wr
title: CCDC 2097084: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d5xs
title: CCDC 2097085: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d5yt
title: CCDC 2097086: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d5zv
title: CCDC 2097087: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d60x
title: CCDC 2097088: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d61y
title: CCDC 2097089: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d62z
title: CCDC 2097090: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28d630
title: CCDC 2097091: Experimental Crystal Structure Determination

description: Related Article: Kai Lang, Yang Hu, Wan-Chen Cindy Lee, X. Peter Zhang|2022|Nat. Synth.|1|548|doi:10.1038/s44160-022-00107-3
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.19241967
title: Dataset of dengue_AST_ALT

description: Transaminases in predicting severe dengue
DOI: 10.6084/m9.figshare.19241967.v1
title: Dataset of dengue_AST_ALT

description: Transaminases in predicting severe dengue
DOI: 10.5281/zenodo.6908133
title: IMGL Dataset

description: The IMGL (Intestinal Metaplasia gastric GLands) dataset includes 500 normal and 500 gastric glands with intestinal metaplasia. Gastric tissues were collected at University College London Hospital NHS trust, with ethical approval with informed consent taken for prospective tissue collection. The tissues underwent routine H&E staining. Please cite as: Barmpoutis P, Yuan J, Waddingham W, Ross C, Kayhanian H, Stathaki T, Alexander DC, Jansen M (2022). Multi-scale Deformable Transformer for the Classification of Gastric Glands: The IMGL Dataset. Cancer Prevention through early detecTion Workshop, MICCAI 2022, September 22, 2022.
DOI: 10.5281/zenodo.6908132
title: IMGL Dataset

description: The IMGL (Intestinal Metaplasia gastric GLands) dataset includes 500 normal and 500 gastric glands with intestinal metaplasia. Gastric tissues were collected at University College London Hospital NHS trust, with ethical approval with informed consent taken for prospective tissue collection. The tissues underwent routine H&E staining. Please cite as: Barmpoutis P, Yuan J, Waddingham W, Ross C, Kayhanian H, Stathaki T, Alexander DC, Jansen M (2022). Multi-scale Deformable Transformer for the Classification of Gastric Glands: The IMGL Dataset. Cancer Prevention through early detecTion Workshop, MICCAI 2022, September 22, 2022.
DOI: 10.6084/m9.figshare.20375781
title: Materials detect sexism ROC

description: Materials (sexist, non-sexist, and neutral vignettes) used in the study 'learning to identify sexism'
DOI: 10.6084/m9.figshare.20375781.v1
title: Materials detect sexism ROC

description: Materials (sexist, non-sexist, and neutral vignettes) used in the study 'learning to identify sexism'
DOI: 10.5281/zenodo.6923186
title: A method for Boolean analysis of protein interactions at a molecular level.

description: CellProfiler output files for the manuscript ' A method for Boolean analysis of protein interactions at a molecular level'. The present dataset includes all raw, numerical data generated by CellProfiler analyses performed for the aforementioned manuscript and are presented in it. It also contains the descriptive data and statistical analyses data for all the plots present in the manuscript.
DOI: 10.6084/m9.figshare.20391685
title: Early Cretaceous partial melting recorded by pelitic gneiss from the Nagasaki Metamorphic Complex, western Kyushu, Japan: initiation of Cretaceous high-<i>T</i> metamorphism at eastern margin of Eurasia

description: We present Early Cretaceous partial melting recorded by pelitic gneiss from the Nagasaki Metamorphic Complex, western Kyushu, Japan. The existence of the partially melted rock in the complex may imply initiation of long-lived high-<i>T</i> metamorphism in proto-southwest Japan at Cretaceous eastern margin of Eurasia. The gneisses are composed of three garnet-bearing layers and one felsic lens, and they show mylonitic foliation. Application of Zr-in-rutile geothermometer and quartz-in-garnet Raman geobarometer for inclusion rutile and quartz in garnet provided prograde condition of 670–692°C and 1.01–1.26 GPa and peak condition of 755–769°C and 1.17–1.38 GPa. These conditions correspond to those of lower crustal depths between volcanic arc and forearc where thermal advection by wedge mantle corner flow occurs. Presence of the felsic lens whose mineral assemblage can undergo partial melting under the peak condition and presence of a crystallized melt inclusion in garnet suggest that distinct partial melting occurred during the metamorphism. The concordant U–Pb ages of metamorphic zircon rims are ranging from 131.5 ± 4.3 to 120.1 ± 3.9 Ma. The mean square weighted deviation (MSWD) of the metamorphic age was as large as 6.4, implying a significant duration of high-<i>T</i> condition for growth of metamorphic zircon. The obtained ages are within the period of the magmatic hiatus that has previously proposed around southwest Japan and Korean Peninsula (ca. 160–120 Ma) that is due to stop of wedge mantle corner flow by flatting of subducting slab. Our results suggest that high-<i>T</i> metamorphism associated with partial melting at lower crustal depths along Early Cretaceous proto-southwest Japan has already been initiated at the late stage of the hiatus (ca. 130 Ma). This may be due to slab rollback and trench retreat at eastern margin of Eurasia.
DOI: 10.6084/m9.figshare.20391685.v1
title: Early Cretaceous partial melting recorded by pelitic gneiss from the Nagasaki Metamorphic Complex, western Kyushu, Japan: initiation of Cretaceous high-<i>T</i> metamorphism at eastern margin of Eurasia

description: We present Early Cretaceous partial melting recorded by pelitic gneiss from the Nagasaki Metamorphic Complex, western Kyushu, Japan. The existence of the partially melted rock in the complex may imply initiation of long-lived high-<i>T</i> metamorphism in proto-southwest Japan at Cretaceous eastern margin of Eurasia. The gneisses are composed of three garnet-bearing layers and one felsic lens, and they show mylonitic foliation. Application of Zr-in-rutile geothermometer and quartz-in-garnet Raman geobarometer for inclusion rutile and quartz in garnet provided prograde condition of 670–692°C and 1.01–1.26 GPa and peak condition of 755–769°C and 1.17–1.38 GPa. These conditions correspond to those of lower crustal depths between volcanic arc and forearc where thermal advection by wedge mantle corner flow occurs. Presence of the felsic lens whose mineral assemblage can undergo partial melting under the peak condition and presence of a crystallized melt inclusion in garnet suggest that distinct partial melting occurred during the metamorphism. The concordant U–Pb ages of metamorphic zircon rims are ranging from 131.5 ± 4.3 to 120.1 ± 3.9 Ma. The mean square weighted deviation (MSWD) of the metamorphic age was as large as 6.4, implying a significant duration of high-<i>T</i> condition for growth of metamorphic zircon. The obtained ages are within the period of the magmatic hiatus that has previously proposed around southwest Japan and Korean Peninsula (ca. 160–120 Ma) that is due to stop of wedge mantle corner flow by flatting of subducting slab. Our results suggest that high-<i>T</i> metamorphism associated with partial melting at lower crustal depths along Early Cretaceous proto-southwest Japan has already been initiated at the late stage of the hiatus (ca. 130 Ma). This may be due to slab rollback and trench retreat at eastern margin of Eurasia.
DOI: 10.6084/m9.figshare.16457936
title: Miocene extension and magma generation in the Apuseni Mts. (western Romania): a review

description: The Apuseni Mts. is a key area to study the interplay between intra-continental extensional tectonics, sedimentation, and magmatism. These events occurred from ~14.5 to 7 Ma, covering the collision of the Tisza-Dacia mega-unit with the East European Platform at ~11 Ma and formation of a thin-skinned fold-thrust belt in the East Carpathians. The Zărand-Brad-Zlatna basin (~120 km in length) is the main graben system associated with the magmatic activity. To its south, it is bounded by two younger (&lt;12 Ma) sub-basins: Caraci and Săcărâmb both hosting active magmatism. To the north-east, the smaller Roşia Montană–Baia de Arieş–Bucium sub-basin and, to the south-east, the Deva sub-basin are also associated with magmatism. Several andesite intrusions are also known in the northernmost Apuseni Mts. at Moigrad. Volcanism from ~14.5 to ~12 Ma displays a typical calc-alkaline affinity with high <sup>208</sup>Pb/<sup>204</sup>Pb (38.6–38.8) and <sup>207</sup>Pb/<sup>204</sup>Pb (15.65–15.67), moderate to high <sup>87</sup>Sr/<sup>86</sup>Sr (0.7047–0.7085) and low to high δ<sup>18</sup>O<sub>wr</sub> (&gt;7‰) values. The younger igneous rocks (&lt;12 Ma) show high Sr/Y and a variable but significant enrichment in LILE up to ~7 Ma, coupled with low <sup>87</sup>Sr/<sup>86</sup>Sr (0.7040–0.7045), low <sup>208</sup>Pb/<sup>204</sup>Pb (38.2–38.6) and <sup>207</sup>Pb/<sup>204</sup>Pb (15.59–15.63), and low δ<sup>18</sup>O (5.5–5.7‰). The geodynamic evolution of the area started as regional transtensional with rotational tectonics generating horst and graben structures and ended with a transpressional event. This setting provided the conditions for the formation of a large underplated magma chamber at the crust – mantle boundary (MASH zone), in response to hot upwelling convective asthenosphere. Melting of the lower crust and mixing with mantle melts may have played an important part in the magmatic evolution. The spatial and temporal changes in composition were generated in magma at the crust – mantle boundary, with different crustal thicknesses. Further crustal assimilation and minor fractional crystallization in crustal magma chambers were characteristic for each region.
DOI: 10.6084/m9.figshare.16457936.v3
title: Miocene extension and magma generation in the Apuseni Mts. (western Romania): a review

description: The Apuseni Mts. is a key area to study the interplay between intra-continental extensional tectonics, sedimentation, and magmatism. These events occurred from ~14.5 to 7 Ma, covering the collision of the Tisza-Dacia mega-unit with the East European Platform at ~11 Ma and formation of a thin-skinned fold-thrust belt in the East Carpathians. The Zărand-Brad-Zlatna basin (~120 km in length) is the main graben system associated with the magmatic activity. To its south, it is bounded by two younger (&lt;12 Ma) sub-basins: Caraci and Săcărâmb both hosting active magmatism. To the north-east, the smaller Roşia Montană–Baia de Arieş–Bucium sub-basin and, to the south-east, the Deva sub-basin are also associated with magmatism. Several andesite intrusions are also known in the northernmost Apuseni Mts. at Moigrad. Volcanism from ~14.5 to ~12 Ma displays a typical calc-alkaline affinity with high <sup>208</sup>Pb/<sup>204</sup>Pb (38.6–38.8) and <sup>207</sup>Pb/<sup>204</sup>Pb (15.65–15.67), moderate to high <sup>87</sup>Sr/<sup>86</sup>Sr (0.7047–0.7085) and low to high δ<sup>18</sup>O<sub>wr</sub> (&gt;7‰) values. The younger igneous rocks (&lt;12 Ma) show high Sr/Y and a variable but significant enrichment in LILE up to ~7 Ma, coupled with low <sup>87</sup>Sr/<sup>86</sup>Sr (0.7040–0.7045), low <sup>208</sup>Pb/<sup>204</sup>Pb (38.2–38.6) and <sup>207</sup>Pb/<sup>204</sup>Pb (15.59–15.63), and low δ<sup>18</sup>O (5.5–5.7‰). The geodynamic evolution of the area started as regional transtensional with rotational tectonics generating horst and graben structures and ended with a transpressional event. This setting provided the conditions for the formation of a large underplated magma chamber at the crust – mantle boundary (MASH zone), in response to hot upwelling convective asthenosphere. Melting of the lower crust and mixing with mantle melts may have played an important part in the magmatic evolution. The spatial and temporal changes in composition were generated in magma at the crust – mantle boundary, with different crustal thicknesses. Further crustal assimilation and minor fractional crystallization in crustal magma chambers were characteristic for each region.
DOI: 10.6084/m9.figshare.16457936.v2
title: Miocene extension and magma generation in the Apuseni Mts. (western Romania): a review

description: The Apuseni Mts. is a key area to study the interplay between intra-continental extensional tectonics, sedimentation, and magmatism. These events occurred from ~14.5 to 7 Ma, covering the collision of the Tisza-Dacia mega-unit with the East European Platform at ~11 Ma and formation of a thin-skinned fold-thrust belt in the East Carpathians. The Zărand-Brad-Zlatna basin (~120 km in length) is the main graben system associated with the magmatic activity. To its south, it is bounded by two younger (&lt;12 Ma) sub-basins: Caraci and Săcărâmb both hosting active magmatism. To the north-east, the smaller Roşia Montană–Baia de Arieş–Bucium sub-basin and, to the south-east, the Deva sub-basin are also associated with magmatism. Several andesite intrusions are also known in the northernmost Apuseni Mts. at Moigrad. Volcanism from ~14.5 to ~12 Ma displays a typical calc-alkaline affinity with high <sup>208</sup>Pb/<sup>204</sup>Pb (38.6–38.8) and <sup>207</sup>Pb/<sup>204</sup>Pb (15.65–15.67), moderate to high <sup>87</sup>Sr/<sup>86</sup>Sr (0.7047–0.7085) and low to high δ<sup>18</sup>O<sub>wr</sub> (&gt;7‰) values. The younger igneous rocks (&lt;12 Ma) show high Sr/Y and a variable but significant enrichment in LILE up to ~7 Ma, coupled with low <sup>87</sup>Sr/<sup>86</sup>Sr (0.7040–0.7045), low <sup>208</sup>Pb/<sup>204</sup>Pb (38.2–38.6) and <sup>207</sup>Pb/<sup>204</sup>Pb (15.59–15.63), and low δ<sup>18</sup>O (5.5–5.7‰). The geodynamic evolution of the area started as regional transtensional with rotational tectonics generating horst and graben structures and ended with a transpressional event. This setting provided the conditions for the formation of a large underplated magma chamber at the crust – mantle boundary (MASH zone), in response to hot upwelling convective asthenosphere. Melting of the lower crust and mixing with mantle melts may have played an important part in the magmatic evolution. The spatial and temporal changes in composition were generated in magma at the crust – mantle boundary, with different crustal thicknesses. Further crustal assimilation and minor fractional crystallization in crustal magma chambers were characteristic for each region.
DOI: 10.6084/m9.figshare.20375058
title: Data set SPSS detect Sexism ROC

description: Data set used for analysis in SPSS
DOI: 10.6084/m9.figshare.20375058.v1
title: Data set SPSS detect Sexism ROC

description: Data set used for analysis in SPSS
DOI: 10.6084/m9.figshare.20375139
title: Codebook detect Sexism SPSS

description: Codebook for the analysis of the data set in SPSS
DOI: 10.6084/m9.figshare.20391693
title: Syntax data analysis SPSS detect sexism

description: Syntax for data analysis in SPSS
DOI: 10.6084/m9.figshare.20375184
title: Data set iMRMC detect sexism ROC

description: Data set ROC analyses in iMRMC