cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29817206
title: Phenotype data for QTL mapping

description: Metabolic Syndrome (MetS) is a cluster of symptoms including obesity, dysregulation of blood sugars and lipids, and elevated blood pressure, which increase the risk of developing type-2 diabetes and cardiovascular disease in humans. It is a disease brought on by our modern shift in environment (including diet and activity levels) and has reached epidemic levels. An individual's risk of MetS is due to complex combinations of genetic and environmental factors including diet. Despite the apparent centrality of genotype-by-environment interactions in MetS prevalence, we have a limited understanding of the genetic architecture of these environment dependent traits and how the symptoms of MetS may be linked together by genetic mechanisms. In <i>Drosophila melanogaster,</i> genotype-by-diet interaction effects explain a substantial amount of the variation in MetS-like traits (weight, triglyceride storage, sugar content) in a natural population. In this study, we characterized the genetic architecture of both genotypic (main) effect and genotype-by-diet interaction (plastic) effects in MetS-like traits in the <i>Drosophila </i>SyntheticPopulation Resource. We tested three central hypotheses in this study: 1) Loci responsible for phenotypic variation in MetS-like traits should be shared across traits. 2) Genetic loci responsible for genetic variation in environmental plasticity and epistatic interactions for MetS-like traits should also be the loci responsible for the main effects. 3) Genes responsible for variation in MetS-like traits should share common functions if they are not the same loci. By using a round-robin crossing scheme and novel computational analyses, we were able to identify additive and dominance effect loci, as well as map epistatic loci that are diet-specific or diet-independent. The compelling conceptual finding of this study is that the main effect (diet-independent) and plastic loci are largely distinct. Further, we found that loci exhibiting epistatic effects on these traits were distinct from those with main effects. Thus, identifying the particular genes responsible for the primary genetic effects of MetS are unlikely to clarify how genetic variants interact with the environment or the genome to influence disease risk. Further, tremendous cryptic genetic variation for metabolic traits is lurking in natural populations. We have explored the function of candidate genes from our study both empirically and with bioinformatics tools. While some of the candidate genes might have been expected, most would not have been identified <i>a priori</i>, thus with this study we have identified many new candidate mechanisms contributing to the genetic and genotype-by-diet interaction effects on MetS variance.
DOI: 10.6084/m9.figshare.29817206.v1
title: Phenotype data for QTL mapping

description: Metabolic Syndrome (MetS) is a cluster of symptoms including obesity, dysregulation of blood sugars and lipids, and elevated blood pressure, which increase the risk of developing type-2 diabetes and cardiovascular disease in humans. It is a disease brought on by our modern shift in environment (including diet and activity levels) and has reached epidemic levels. An individual's risk of MetS is due to complex combinations of genetic and environmental factors including diet. Despite the apparent centrality of genotype-by-environment interactions in MetS prevalence, we have a limited understanding of the genetic architecture of these environment dependent traits and how the symptoms of MetS may be linked together by genetic mechanisms. In <i>Drosophila melanogaster,</i> genotype-by-diet interaction effects explain a substantial amount of the variation in MetS-like traits (weight, triglyceride storage, sugar content) in a natural population. In this study, we characterized the genetic architecture of both genotypic (main) effect and genotype-by-diet interaction (plastic) effects in MetS-like traits in the <i>Drosophila </i>SyntheticPopulation Resource. We tested three central hypotheses in this study: 1) Loci responsible for phenotypic variation in MetS-like traits should be shared across traits. 2) Genetic loci responsible for genetic variation in environmental plasticity and epistatic interactions for MetS-like traits should also be the loci responsible for the main effects. 3) Genes responsible for variation in MetS-like traits should share common functions if they are not the same loci. By using a round-robin crossing scheme and novel computational analyses, we were able to identify additive and dominance effect loci, as well as map epistatic loci that are diet-specific or diet-independent. The compelling conceptual finding of this study is that the main effect (diet-independent) and plastic loci are largely distinct. Further, we found that loci exhibiting epistatic effects on these traits were distinct from those with main effects. Thus, identifying the particular genes responsible for the primary genetic effects of MetS are unlikely to clarify how genetic variants interact with the environment or the genome to influence disease risk. Further, tremendous cryptic genetic variation for metabolic traits is lurking in natural populations. We have explored the function of candidate genes from our study both empirically and with bioinformatics tools. While some of the candidate genes might have been expected, most would not have been identified <i>a priori</i>, thus with this study we have identified many new candidate mechanisms contributing to the genetic and genotype-by-diet interaction effects on MetS variance.
DOI: 10.15468/dl.s3wm2a
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Richardia scabra",
 "Country is El Salvador",
 "HasCoordinate is true"
 ]
}

 The dataset includes 86 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006329-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rn8a5k
title: Occurrence Download

description: A dataset containing 1270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Herpsilochmus pileatus)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 1270 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006330-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zzyd44
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Neovison vison)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006332-250802193616735/datasets/export for details.
DOI: 10.15468/dl.vvwfev
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AEB6357"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006333-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t2e287
title: Occurrence Download

description: A dataset containing 37357 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Neovison vison)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 37357 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006331-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cw725j
title: Occurrence Download

description: A dataset containing 110957 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hippophae rhamnoides)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 110957 records from 572 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006311-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/0c3-vp6-fbm
title: Tropaeolum deckerianum var. deckerianum Moritz & H. Karst.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/2tx-41a-z2h
title: Smithia abyssinica (A. Rich.) Verdc.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/t64-cm2-nm6
title: Vanillosmopsis discolor (DC.) Baker

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc9y4cq
title: CCDC 296123: Experimental Crystal Structure Determination

description: Related Article: C.Ka-Lei Li, R.Wai-Yin Sun, S.Chi-Fai Kui, Nianyong Zhu, Chi-Ming Che|2006|Chem.-Eur.J.|12|5253|doi:10.1002/chem.200600117
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/cel-z8s-gb1
title: Licania octandra var. octandra (Hoffmanns. ex Schult.) Kuntze

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/eph-drd-gax
title: Byrsonima leucophlebia Griseb.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/pas-frj-6jl
title: Phyllanthus rupestris Kunth

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccb105j
title: CCDC 298876: Experimental Crystal Structure Determination

description: Related Article: C.Ka-Lei Li, R.Wai-Yin Sun, S.Chi-Fai Kui, Nianyong Zhu, Chi-Ming Che|2006|Chem.-Eur.J.|12|5253|doi:10.1002/chem.200600117
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/gmc-kg7-2y2
title: Baccharis singularis (Vell.) G. M. Barroso

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/qvg-kcn-0h2
title: Ruellia genduana (Schweinf.) C. B. Clarke

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc9nrqd
title: CCDC 288074: Experimental Crystal Structure Determination

description: Related Article: Y.Soneta, T.Midorikawa, K.Miyamura|2006|Bull.Chem.Soc.Jpn.|79|1060|doi:10.1246/bcsj.79.1060
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/7qz-bh9-9ya
title: Acmanthera latifolia (A. Juss.) Griseb.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/cat-c5b-jz1
title: Rhabdodendron macrophyllum (Spruce ex Benth.) Huber

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/rjl-92f-90k
title: Serjania caracasana (Jacq.) Willd.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc9nrrf
title: CCDC 288075: Experimental Crystal Structure Determination

description: Related Article: Y.Soneta, T.Midorikawa, K.Miyamura|2006|Bull.Chem.Soc.Jpn.|79|1060|doi:10.1246/bcsj.79.1060
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34740/kaggle/dsv/13402094
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.3535/3sd-6cw-gks
title: Setaria parviflora (Poir.) Kerguélen

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/qf9-new-v1l
title: Byrsonima poeppigiana A. Juss.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc9r4bh
title: CCDC 290356: Experimental Crystal Structure Determination

description: Related Article: T.Ama, T.Yonemura, M.Yamaguchi|2006|Bull.Chem.Soc.Jpn.|79|1063|doi:10.1246/bcsj.79.1063
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/2vs-nsn-fyr
title: Heteropterys helicina Griseb.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/n4e-jqt-t9b
title: Eremopyrum orientale (L.) Jaub. & Spach

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/yhp-4qf-481
title: Alchornea triplinervia (Spreng.) Müll. Arg.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc9r4cj
title: CCDC 290357: Experimental Crystal Structure Determination

description: Related Article: T.Ama, T.Yonemura, M.Yamaguchi|2006|Bull.Chem.Soc.Jpn.|79|1063|doi:10.1246/bcsj.79.1063
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc9zcrc
title: CCDC 297313: Experimental Crystal Structure Determination

description: Related Article: N.Yoshinari, Y.Chikamoto, M.Iwata, T.Kawamoto, T.Konno|2006|Bull.Chem.Soc.Jpn.|79|1066|doi:10.1246/bcsj.79.1066
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/b7p-0q5-w67
title: Alternanthera dentata (Moench) Stuchlík ex R. E. Fr.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/lc5-dz5-0vl
title: Senecio steudelii Sch. Bip. ex A. Rich.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/ws7-hhe-j5e
title: Sacoglottis amazonica Mart.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc9zcsd
title: CCDC 297314: Experimental Crystal Structure Determination

description: Related Article: N.Yoshinari, Y.Chikamoto, M.Iwata, T.Kawamoto, T.Konno|2006|Bull.Chem.Soc.Jpn.|79|1066|doi:10.1246/bcsj.79.1066
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/0tk-8jl-5hr
title: Bauhinia acuruana Moric.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/2aw-l9e-jnm
title: Cupania scrobiculata Rich.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/2wz-gf8-k3a
title: Humiria floribunda Mart.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc9qbdq
title: CCDC 289583: Experimental Crystal Structure Determination

description: Related Article: T.Yamaguchi, M.Irie|2006|Bull.Chem.Soc.Jpn.|79|1100|doi:10.1246/bcsj.79.1100
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.6mqhu5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ciconiiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-30 -90,-20 -90,-20 -80,-30 -80,-30 -90))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027878-251009101135966/datasets/export for details.
DOI: 10.3535/klp-1jk-fj3
title: Conceveiba terminalis (Baill.) Müll. Arg.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/n0n-q7t-64v
title: Hyptis mutabilis (Rich.) Briq.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc9kwrg
title: CCDC 285316: Experimental Crystal Structure Determination

description: Related Article: N.V.Dubrovina, Haijun Jiao, V.I.Tararov, A.Spannenberg, R.Kadyrov, A.Monsees, A.Christiansen, A.Borner|2006|Eur.J.Org.Chem.|2006|3412|doi:10.1002/ejoc.200600143
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc9w45g
title: CCDC 294195: Experimental Crystal Structure Determination

description: Related Article: T.Yamaguchi, M.Irie|2006|Bull.Chem.Soc.Jpn.|79|1100|doi:10.1246/bcsj.79.1100
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/1we-qqq-vs6
title: Tricholaena teneriffae (L. f.) Link

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/s8z-t4e-bgc
title: Bauhinia flexuosa Moric.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/ytn-qnm-mdn
title: Licania parviflora Benth.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc8t6t2
title: CCDC 262564: Experimental Crystal Structure Determination

description: Related Article: Jie Wu, Yinglin Song, Erpeng Zhang, Hongwei Hou, Yaoting Fan, Yu Zhu|2006|Chem.-Eur.J.|12|5823|doi:10.1002/chem.200500905
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/emg-6k9-kz8
title: Mabea nitida Spruce ex Benth.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/jm9-j1l-yay
title: Polygala brevialata Chodat

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc8t6v3
title: CCDC 262565: Experimental Crystal Structure Determination

description: Related Article: Jie Wu, Yinglin Song, Erpeng Zhang, Hongwei Hou, Yaoting Fan, Yu Zhu|2006|Chem.-Eur.J.|12|5823|doi:10.1002/chem.200500905
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/376-31c-jxb
title: Tropaeolum moritzianum Klotzsch

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/67j-84w-d8b
title: Chaetocarpus schomburgkianus (Kuntze) Pax & K. Hoffm.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/k2k-6ll-744
title: Cleome rotundifolia (Mart. & Zucc.) Iltis

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.