cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25921/y796-a161
title: Cetacean and sea turtle visual observations using line-transect survey methods aboard a NOAA DeHavilland DHC-6 Twin Otter (TO) aircraft in the Gulf of Mexico, during the Gulf of Mexico Marine Assessment Program for Protected Species (GoMMAPPS survey TO18Fa) from 10/12/2018 to 11/28/2018 (NCEI Accession 0243468)

description: As part of the Gulf of Mexico Marine Assessment Program for Protected Species (GoMMAPPS), the Southeast Fisheries Science Center (SEFSC) conducted aerial surveys of the U.S. continental shelf waters (up to the 200-m isobath) in the Gulf of Mexico from 10/12/2018 to 11/28/2018. The survey was designed for a two-team independent visual observer approach with distance sampling to estimate abundance and characterize spatial distribution of marine mammals and sea turtles. This dataset includes marine mammal and sea turtle visual observation data and effort points with surveying conditions that can be used in abundance and density modeling per visual line-transect survey protocols. This dataset also includes marine mammal photographs used to aid in species identification, as well as photographs and coordinates of algal blooms.
DOI: 10.25921/2ppf-0q52
title: Oceanographic data collected during the EX2107: Windows to the Deep 2021: Southeast U.S. (ROV and Mapping) expedition on NOAA Ship OKEANOS EXPLORER in the North Atlantic Ocean and the Gulf of America from 2021-10-22 to 2021-11-15 (NCEI Accession 0243894)

description: This dataset contains oceanographic data collected from NOAA Ship OKEANOS EXPLORER in the North Atlantic Ocean and the Gulf of America from 2021-10-22 to 2021-11-15. Data acquisition from shipboard sensors includes navigational data, meteorological data (wind), and oceanographic data (bathythermograph, sound velocity probe, thermosalinograph). Additional data includes Profile Data (ASVP, CTD, and XBT), event logs, images, ROV ancillary data, ADCP Data, and specimen data.
DOI: 10.25921/f9ne-3p90
title: NCCOS assessment: Predicting deep-sea coral habitats within the Papahānaumokuākea Marine National Monument, Hawaii (NCEI Accession 0244006)

description: This dataset contains geospatial data from spatial predictive models that were developed for 22 deep-sea coral and sponge (DSCS) taxa within the Papahānaumokuākea Marine National Monument (PMNM) from depths of 100-3,500 m. It includes raster datasets at 360 x 360 m spatial resolution depicting the predicted probability of occurrence for each of these taxa and a raster dataset at 360 x 360 m spatial resolution depicting the predicted taxonomic richness. These predictions provide a baseline for the potential distribution of these vulnerable and ecologically significant communities in the northwestern Hawaiian Islands (NWHI), and will support management planning, permitting, exploration and sanctuary designation efforts by the Monument. The data collection also includes raster datasets at 360 x 360 m spatial resolution depicting each of the 44 spatial environmental predictor variables considered for fitting the models.
DOI: 10.25921/vdt2-vr91
title: Adelie penguin (Pygoscelis adeliae) telemetry collected by Argos satellites in the Southern Ocean for the U.S. Antarctic Marine Living Resources project from 1996-10-29 to 2013-02-19 (NCEI Accession 0244399)

description: The dataset contains geographic location estimates of Adelie penguins (Pygoscelis adeliae) tracked via Argos satellite telemetry in the Southern Ocean for the U.S. Antarctic Marine Living Resources project from 1996-10-29 to 2013-02-19. Birds were instrumented with back-mounted Argos satellite transmitters at the Copacabana Colony (62.21S, 58.42W) on King George Island during the austral summer breeding seasons (October - February) from 1996 to 2013. Typical deployments during the breeding season lasted 5 to 8 days, while some winter deployments lasted several months. The data set identifies the sex of the bird tracked (male, female, or unknown) and the age of the bird (adult). The data also identify the breeding stage of the bird during the summer tracking period (incubation, brood/guard, or creche) or is noted as 'winter' if tracked outside the summer breeding season. The data include the date (DD/MM/YYYY) and time (GMT) of the location estimate. Finally, a categorical estimate of uncertainty in the location estimate is provided by Argos quality codes (3,2,1,0,A,B).
DOI: 10.15468/dl.va48v9
title: Occurrence Download

description: A dataset containing 6428 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "TaxonKey is Perdix perdix",
 "Year 2018-2018"
 ]
}

 The dataset includes 6428 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054659-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.scdxsn
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bombyx mori",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 245 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054660-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25921/a2hc-2941
title: NCCOS Assessment: Water Quality in Fagatele Bay, National Marine Sanctuary of American Samoa, from 2019-04-22 to 2019-04-26 (NCEI Accession 0247462)

description: This dataset represents water quality chemistry information for Fagatele Bay, a unit of the National Marine Sanctuary of American Samoa (NMSAS). Contaminant groups quantified were: pesticides, personal care products, pharmaceuticals and hydrocarbons. Trace metals analysis of benthic sediments was also conducted. Additionally, standard suite of nutrient parameters (nitrate, nitrite, ammonium, urea, total nitrogen, orthophosphate, total phosphorus and silica), as well as tracers of human waste (sucralose and caffeine) were quantified at eight targeted sites (bottom samples) during the same time period.
DOI: 10.25921/hftw-pr46
title: Scattering coefficients of rough hailstones from computational electromagnetic models (NCEI Accession 0254298)

description: The library of scattering coefficients contains scattering coefficients of rough hail obtained from computational electromagnetic models modeled in WIPL-D software. The library consists of models of dry and wet (water coated) hail with axis ratios of 0.6, 0.7, and 0.8 and core sizes from 5 mm to 100 mm. Model surface roughness is introduced as a fraction of the models' equatorial radius.
DOI: 10.25921/4dwb-6b76
title: Patterns of association and distribution of estuarine-resident common bottlenose dolphins (Tursiops truncatus) with photographs and environmental parameters in North Carolina, USA from 2018-01-08 to 2018-01-26 (NCEI Accession 0254384)

description: The NOAA Southeast Fisheries Science Center conducted surveys within the southern North Carolina estuarine system from 2018-01-08 to 2018-01-26 to provide an updated estimate of abundance for the Southern North Carolina Estuarine System Stock (SNCESS) of common bottlenose dolphins (Tursiops truncatus) using photographic-identification capture-mark-recapture (photo-ID) techniques. The surveys were strategically planned for winter when little overlap in distribution with the Northern North Carolina Estuarine System Stock (NNCESS) or coastal migratory stocks of bottlenose dolphins was expected. Because the sighting histories of individual dolphins have been an important tool for identifying or confirming stock membership, we also compared dolphins that were photo-identified during the 2018 surveys to dolphins that were included in a long-term photo-ID catalog dating back to 1995-07-10. Using the 2018 photographs and the long-term photo-ID catalog, we also evaluated the use of differences in Xenobalanus globicipitis infestation captured in photographs among individuals and groups as support for stock definition. This dataset contains the spatiotemporal sighting histories, photographs, observations of Xenobalanus globicipitis presence/absence, and environmental data for common bottlenose dolphin groups observed during the 2018 surveys. Data for individual dolphins observed during the 2018 surveys that were previously included in the long-term photo-ID catalog were provided as a subset with corresponding photographic matches. The sighting history and photographs of individuals matching from the long-term catalog are included with the exception of those dates indicated as capture events, as such photographs were not digitized.
DOI: 10.25921/efv4-9z56
title: Cetacean and sea turtle spatial density model outputs from visual observations using line-transect survey methods aboard NOAA vessel and aircraft platforms in the Gulf of Mexico from 2003-06-12 to 2019-07-31 (NCEI Accession 0256800)

description: Based on ship-based and aerial line-transect surveys conducted in the U.S. waters of the Gulf of Mexico between 2003 and 2019, the NOAA Southeast Fisheries Science Center (SEFSC) developed spatial density models (SDMs) for cetacean and sea turtle species for the entire Gulf of Mexico. SDMs were developed using a generalized additive modeling (GAM) framework to determine the relationship between species abundance and environmental variables (monthly averaged oceanographic conditions during 2015 - 2019). Models were extrapolated beyond the U.S. Gulf of Mexico to provide insight into potential high density areas throughout the Gulf of Mexico. However, extrapolations of this type should be interpreted with caution. This dataset includes 19 shapefiles for the SDMs for each cetacean and sea turtle species or species group.
DOI: 10.25921/kmc2-n488
title: Depth, salinity, temperature, pH, total alkalinity, and dissolved inorganic carbon collected from CTD profiler equipped with a pH sensor and Niskin bottles, using a spectrophotometer, open-cell potentiometric titration, and a Licor-700 CO2 detector at the University of Washington’s Friday Harbor Laboratory or a CO2 coulometer at the University of Washington’s School of Oceanography from 2012-04-09 to 2012-06-16 (NCEI Accession 0259305)

description: We characterized the pH environment currently experienced by Euphausia pacifica eggs and larvae at 2 stations in the northern end of Hood Canal in Puget Sound, Washington, USA (47.61, -122.94 and 47.66, -122.86; Puget Sound Regional Synthesis Model [PRISM] stations P14 and P15). The southwest station, P14, is deeper (180 m) than the northeastern station, P15 (130 m). Samples were collected during the day and night on 9−10 April and 15−16 June 2012. This design was chosen to sample during the spawning season of E. pacifica (approximately February to July) in an area where low pH waters occur. We collected physical and chemical data using a CTD profiler equipped with a pH sensor and Niskin bottles, which were used to collect water at 6 depths for spectrophotometric pH, total dissolved inorganic carbon (DIC), and total alkalinity (TA) analyses. The CTD pH sensor was not accurate, so it was only used to determine the shape of the pH profile relative to discrete measurements. Spectrophotometric pH was measured shipboard immediately after water sampling. Total alkalinity was measured by open-cell potentiometric titration, and DIC was measured by acidification and quantification either using a Licor-700 CO2 detector, or a CO2 coulometer.
DOI: 10.25921/jcpv-dv34
title: Depth, salinity, temperature, and pH collected from CTD profiler equipped with a pH sensor and Niskin bottles from two stations in the northern end of Hood Canal in Puget Sound, Washington during the day and night from 2012-04-09 to 2012-06-16 (NCEI Accession 0259306)

description: This dataset contains the discrete bottle (CTD profile) data of the pH environment experienced by Euphausia pacifica eggs and larvae at two station the northern end of Hood Canal in Puget Sound, Washington. The southwest station, P14, is deeper (180 m) than the northeastern station, P15 (130 m). Samples were collected during the day and night on 9−10 April and 15−16 June 2012. Physical and chemical data were collected using a CTD profiler equipped with a pH sensor (SBE 18, Sea-Bird Electronics) and Niskin bottles. This design was chosen to sample during the spawning season of E. pacifica (approximately February to July) in an area where low pH waters occur.
DOI: 10.15468/dl.dh5bx4
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Euschistus heros"
 ]
}

 The dataset includes 142 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054663-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25921/89ns-h092
title: NCCOS Mapping: Satellite derived bathymetry and benthic habitat mapping to support sea level rise models for the area surrounding Roi-Namur Island, Kwajalein Atoll, Republic of the Marshall Islands (NCEI Accession 0259452)

description: Satellite Derived Bathymetry (SDB), benthic habitat, and hydrodynamic friction maps were generated for a study area surrounding Roi-Namur Island, part of the Kwajalein Atoll of the Republic of the Marshall Islands. The SDB and habitat maps were generated from WorldView-2 and -3 satellite imagery. These layers were needed as part of a larger effort to model the impacts of sea-level rise and inundation on Department of Defense installations on atolls in the Pacific Ocean. Tide corrected depth data to parameterize the SDB models and underwater video to aid in classification of the benthic habitat map were collected in the field during an April 2014 mission to Kwajalein Atoll. No video data were submitted in this dataset. For a complete description technique and results see Field et al. 2022.
DOI: 10.25921/be7v-1s13
title: GEFSv12 North Atlantic Oscillation Indices (NCEI Accession 0259492)

description: The North Atlantic Oscillation (NAO) index characterizes the primary mode of atmospheric circulation variability over the North Atlantic region. This dataset provides NAO indices computed from the Global Ensemble Forecast System version 12 (GEFSv12) reanalysis and subseasonal reforecast datasets. These indices are defined from Empirical Orthogonal Function analysis of 500 millibar geopotential height fields in the region of 20-90N latitude, and 90W-40E longitude. For the GEFSv12 reanalysis, these indices are provided once daily for all dates from 2000-2019. For the GEFSv12 reforecasts, these indices are provided only for the subseasonal 35-day reforecasts, which are initialized once per week in the 2000-2019 period, starting from 2000-01-05.
DOI: 10.25921/4z0k-n484
title: U.S. Daily Gridded Precipitation and Temperature Climate Normals for 1991-2020 (NCEI Accession 0259962)

description: The U.S. Daily Gridded Climate Normals Datasets are derived from the nClimGrid-Daily Dataset newly produced by the NOAA National Centers for Environmental Information (NOAA NCEI). Climatologically aided interpolation was used to transform an extensive set of station temperature and precipitation values into grids at a high spatial resolution of 1/24° latitude/longitude, or approximately 5 km. The values for each individual grid cell change smoothly from day-to-day through the application of the same methods used to generate daily normals for observation stations. The averages of all daily gridded temperature normals are constrained by a harmonic fit to equal the monthly gridded. A moving window averaging technique is used to generate smooth daily gridded precipitation normals which are then also adjusted by month so that the sum of the days would equal the monthly gridded normals. Daily gridded climate normals are calculated for total precipitation, and maximum, minimum and average temperature for the conterminous U.S
DOI: 10.15468/dl.td5u57
title: Occurrence Download

description: A dataset containing 3513 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Alien Flora of Nepal at KATH"
 ]
}

 The dataset includes 3513 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054664-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cawn2f
title: Occurrence Download

description: A dataset containing 10710 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Spodoptera frugiperda"
 ]
}

 The dataset includes 10710 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054662-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5n01069t
title: MassIVE MSV000100239 - The autophagic/lysosomal enhancer GHF201 ameliorates pathological features in patient-derived fibroblasts and a mouse model of Pompe disease
title: Pompe Disease (PD) is a neuromuscular lysosomal storage disorder caused by deficiency of the lysosomal glycogen degrading enzyme Gaa. PD pathology implicates autophagic and mitochondrial defects. We tested the lysosomal activator GHF-201 in PD human fibroblasts and Gaa-/- PD mouse model. In PD human fibroblasts, GHF-201 restricted glycogen accumulation and ameliorated lysosomal, autophagic, and mitochondrial dysfunction. Counter-intuitively, oxidative stress was attenuated in PD fibroblasts, possibly attributed to increased mitochondrial mass and dilution of fuel acceptors.
DOI: 10.25921/p8cr-2g98
title: Continuous, underwater profiles of ultraviolet (UV), PAR irradiance, and temperature observations with surface reference measurements collected from R/V LAURENTIAN and other small boats in the Lakes Michigan and Huron in the Great Lakes region from 2012-09-27 to 2021-09-16 (NCEI Accession 0276075)

description: NOAA Great Lakes Environmental Research Laboratory (GLERL) samples and studies the ecosystem of the lower food web of the Laurentian Great Lakes. This collection contains continuous, underwater ultraviolet (UV), PAR and temperature profiles at 26 stations during the open water seasons in Lakes Michigan and Huron from 2012 to 2021. The measurements were collected using a Biospherical Instruments Inc. PUV-2500 submersible, multichannel, profiling, ultraviolet radiometer and PUV2510 reference radiometer attached to the ship during profile collection. UV measurements are in units of microwatts per square centimeter at wavelength (µW/(cm²nm)), PAR measurements are in the units of microEinsteins per square centimeters per second (µE/(cm²sec)) and temperature are in the units of degrees Celsius. Chlorophyll measurements were collected with the instrument, but not included in this data package because the instrument was not calibrated for these locations. The instrument was calibrated for dark offsets as described in the instrument manual on each day the instrument was deployed.

Two summary tables are included in this accession summarizing the attenuation coefficients (Kd) and the 1% attenuation depth. The attenuation coefficients (Kd) were calculated as the slope of the linear regression of the natural logarithm of the ratio_uv versus depth, as described by Kirk (1994). The 1% attenuation depth was calculated using the Kd and intercept from the linear regression of the natural logarithm of the ratio_uv versus depth as: (ln(0.01)-Intercept)/Kd. Only data above 1% of the ambient irradiance were used in these calculations.

Blank cells indicate no data. In the table, “noaa-glerl-uv-TB82-20210927.csv” there are no ambient UV values due to a surface sensor not working, but it does include ratio values. The ratio values were calculated using the first UV measurement at depth (z) as the assumed ambient UV through the entire profile.

The data table column headings and units are described in detail in the data dictionary file named “noaa-glerl-uv-data-dictionary-2012-2021.csv”. File formats included in this data package are .csv and jpg.
DOI: 10.25921/rjtq-rv61
title: NCCOS Assessment: US underwater vehicle activity in the Western Atlantic, 1964 to 2019 (NCEI Accession 0276284)

description: This data resource provides information on the vessel, location, date, institution of origin, purpose, and objective of submersible operations (including Human Occupied Vehicles [HOV], Remotely Operated Vehicles [ROV], and Autonomous Underwater Vehicles [AUV]) conducted in the Western Atlantic in the years 1964 - 2019. Dive logs from 23 different US-based underwater vehicles were collected to create this layer, available in both tabular comma-separated value (.CSV) and geospatial shapefile (.SHP) formats.
DOI: 10.25921/h9kg-0897
title: NCCOS Assessment: U.S. West Coast Cross-Shelf Habitat Suitability Modeling of Benthic Macrofauna, 2016-10-01 to 2020-09-30 (NCEI Accession 0276535)

description: This data collection contains geospatial data from models predicting the spatial distributions of benthic macrofauna offshore of the continental U.S. West Coast to 1200 m depth. It includes raster datasets at 25 x 25 m spatial resolution depicting the mean of the predicted probability of occurrence and the coefficient of variation of the predicted probability of occurrence for 43 taxa of benthic macrofauna. The data collection also includes raster datasets at 25 x 25 m spatial resolution depicting each of the 66 spatial environmental predictor variables considered for fitting the models.
DOI: 10.25921/t188-9739
title: NCCOS Mapping: Geospatial products of water depth, acoustic backscatter, and ROV data collected from NOAA Ship Nancy Foster in the Northeast Caribbean Sea surrounding St. Croix and St. Thomas, US. Virgin Islands from 2019-07-02 to 2019-07-12 (NCEI Accession 0276772)

description: Multibeam and acoustic backscatter data collected from NOAA Ship Nancy Foster from 2019-07-02 to 2019-07-12. The majority of these data were collected using a Kongsberg EM710, with the most inshore portion collected using a Kongsberg EM2040. Bathymetry grids were created using CARIS HIPS and SIPS software, and corrected to Mean Lower Low Water (MLLW). Backscatter mosaics were created using FMGT. Data were acquired and processed to meet IHO Order 1 specifications. Survey depths vary from 10m to over 2800m. EM710 data are available at 16m resolution, and EM2040 data are available at 2m resolution.

During the field mission, a Mohawk 18 Remotely Operated Vehicle (ROV), operated by the University of North Carolina Undersea Vehicles Program collected HD photo and ground validation video. Imagery data is not included with this dataset.
DOI: 10.25921/cn6a-6g06
title: NCCOS Assessment: Predicted habitat suitability for Leiopathes glaberrima in the US Gulf of Mexico, 2016-01-17 to 2017-09-30 (NCEI Accession 0276866)

description: This data collection contains outputs from spatial predictive models of habitat suitability for the black coral Leiopathes glaberrima in the U.S. Gulf of Mexico. The models were derived from records of Leiopathes glaberrima occurrence and environmental and oceanographic variables describing conditions that may influence the distribution of deep-sea corals, including measures of depth, steepness, and complexity of the seafloor, composition of sediments on the seafloor, and ocean productivity.