cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5615449.v9
title: RT-PCR Corneal endothelial cells proliferation uncoated, collagen and Matrigel-coated plates

description: Six White New Zealand rabbits 3-month-old were sacrificed under general anesthesia and a lethal intracardiac injection of sodic pentobarbital. A corneoscleral rim excision was made and the conjunctiva was dissected. Lens and aqueous humor were removed and the corneas were obtained. Under sterile conditions, Descemet’s membrane were separated from corneal stroma and rinsed with basal stabilizer medium (SM) containing OptiMEM-I 8% fetal bovine serum (FBS) and 1% antibiotics. Corneal endothelia were peeled off from the Descemet’s membrane and a ~5 mm2 section was cultured in proliferative medium (PM) containing OptiMEM-I 8% FBS, 20 ng/mL of nerve growth factor (NGF), 5 ng/mL of epidermal growth factor (EGF), 200 µg/L of calcium chloride, 20 µg/mL of ascorbic acid, 0.08% chondroitin sulfate, and antibiotics over Matrigel, Collagen I or no coated plate until confluence (~90% of the plate showed adherent cells, ~15 days). The plates were tripzinised and cultured in SM. Morphological changes were photodocumented. RNA was isolated from CEC cultured in PM and SM. Final point RT-PCRs were made to analyze the expression of the specific CECs markers: glypican-4 (GPC4), tight junction protein 1 (TJP1), and CD200; housekeeping gene glyceraldehyde phosphate dehydrogenase (GAPDH) was used. Electrophoresis of PCR products was performed on a 2% agarose gel and the bands were photodocumented. Immunocytochemistry was performed to analyze the presence of GPC4 and Na/K-ATPase in CEC cultured in each condition. Images were obtained with a fluorescence inverted microscope.<br>
DOI: 10.17632/w766sgwmbd
title: 2024_Moscicki_SurfCoatTechnol 485_130915 dataset

description: Dataset of article: Mościcki T. P., Psiuk R., Jarząbek D. M., Ciemiorek-Bartkowska M., Kulikowski K., Jasiński J., Włoczewski M., Lewandowska M., Effect of titanium and deposition parameters on microstructure and mechanical properties of W-Ti-B thin films deposited by High Power Impulse Magnetron Sputtering, SURFACE AND COATINGS TECHNOLOGY, ISSN: 0257-8972, DOI: 10.1016/j.surfcoat.2024.130915, Vol.485, No.130915, pp.1-13, 2024 funded by the National Centre for Research Development (NCBR, Poland) under project no. TECHMATSTRATEGIII/0017/2019 - purchase of a coatings deposition system and microstructure, nanoindentation, wear resistance and adhesion studies; and National Science Centre (NCN, Poland) 2022/47/B/ST8/01296 – mechanical studies (crack resistance, micropillars compression, film stress).
DOI: 10.3535/4af-387-xyj
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/avq-r3b-fnt
title: †Neobothriocidaris Paul, 1967

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/myr-syz-v2m
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11988378.v3
title: data_sample.csv

description: This dateset contains isotopic signature of CO2 and CH4 and their concentrations as well as eddy covariance data from a semi evergreen forest of north-east India<br>
DOI: 10.6084/m9.figshare.13203998.v1
title: Gene Predictions

description: Genes predicted from co-assemblies genome
DOI: 10.6084/m9.figshare.24771249.v2
title: ANNOTATION FOR CUTV01

description: gene and repeats annotion for CutV01a2
DOI: 10.6084/m9.figshare.8323148.v1
title: illumina_megahit_prodigal_proteins.faa.gz

description: Illumina assembly prodigal protein predictions
DOI: 10.17632/d9j743xsw7
title: Drag-Roughness

description: Drag coefficients' numerical results of spherical particles, irregularly roughened in shape and size as per Weaire-Phelan and Orthogonal lattice structures, at Reynolds numbers 2, 4, 6, 8.  The particles’ roughness has been determined as per different definitions based on either the surfacial or volumetric characteristics of the particles, including the mean diameter concept. Results include total drag, skin friction drag and form drag.
DOI: 10.17632/vcdmdn5pz5
title: To find the correlation between Lower cross syndrome and Q angle among college going students: A Cross Sectional Study

description: This study has the potential to advance knowledge of the connection between Q angle and lower cross syndrome by illuminating the biomechanical and musculoskeletal aspects that could lead to knee and low back pain development. The results could have an impact on clinical practise, giving medical professionals new information about how to assess and treat patients with knee and low back pain and how to design tailored treatments for the lower cross syndrome-related muscle imbalances.
DOI: 10.3535/ey0-00a-0tj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x21-ldw-0kz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21664136.v1
title: Bacillus cabrialesii subsp. cabrialesii subsp. nov. and Bacillus cabrialesii subsp. tritici subsp. nov., plant growth-promoting bacteria and biological control agents isolated from wheat (Triticum turgidum subsp. durum) in the Yaqui Valley, Mexico

description: Strain TSO2T, a plant growth-promoting rhizobacteria and biological control agent, was isolated from wheat rhizosphere sampled from the Yaqui Valley in Mexico. The strain was identified using a polyphasic approach. Based on its analysis of the full-length 16S rRNA gene, strain TSO2T was assigned to the genus<em> Bacillus</em>, which was supported by morphological and metabolic traits, such as Gram-positive staining, rod shape, spore formation, strictly aerobic metabolism, catalase-positive activity, starch, and casein hydrolysis, reduction of nitrate to nitrite, growth in presence of lysozyme and 2% NaCl, citrate utilization, growth at pH 6.0, acid production from glucose and indole production from tryptophan. Additionally, strain TSO2T possesses swarming motility, presenting a featureless mat pattern that can cover the whole petri dish. The whole-genome phylogenetic relationship analysis elucidated that strain TSO2T is closely related to <em>Bacillus cabrialesii</em> TE3T. The maximum values for average nucleotide identity (ANI) and <em>in silico</em> DNA–DNA hybridization from the genome-to-genome distance calculator (GGDC) were 97% and 73.4%, respectively, related to <em>Bacillus cabrialesii</em> TE3T, where both ANI and GGDC values were barely above the species delimitation threshold, but below the subspecies limit. Also, strain TSO2T showed the ability to produce a fatty acid (C18:0) that is not present in closely related <em>Bacillus</em> species. These results provide evidence that strain TSO2T is a novel subspecies of the species <em>Bacillus cabrialesii</em>, for which the name <em>Bacillus cabrialesii</em> subsp. <em>tritici</em> subsp. nov. is proposed. The type strain of <em>Bacillus cabrialesii</em> subsp. <em>tritici</em> subsp. nov. is TSO2T (CM-CNRG TB52T = LBPCV TSO2T). The description of this novel subspecies automatically creates the subspecies <em>Bacillus cabrialesii</em> subsp. <em>cabrialesii </em>subsp. nov. for which the type strain is TE3T (CM-CNRG TB54T= CCStamb A1T).
DOI: 10.6084/m9.figshare.25053014.v1
title: Results

description: Quantification of fibrosis extend and airspace availability in the benchmark dataset (all samples).
DOI: 10.6084/m9.figshare.3141253.v1
title: data of included studies.xlsx

description: General information and risk of bias assessment of included studies<br>
DOI: 10.17632/9wdzw3mb7n
title: ¿Fraude o Aprendizaje? Examenes en linea en 3 pregrados de la ciuad de Medellin. (investigacion en curso 2024)

description: Los datos presentados a continucaio aun son parciale a la fecha de publicacion. 

Durante 2020-2021, ante la pandemia de COVID-19, las instituciones educativas implementaron sistemas de gestión de aprendizaje (LMS) para realizar evaluaciones en línea, aunque estos no permitían monitorear adecuadamente el uso de recursos no autorizados, incrementando el riesgo de fraude a pesar de la existencia de software de proctoring, cuyo alto costo limitó su uso (Bahadorani et al., 2012; Initative, 2016). La incertidumbre sobre la integridad de estos exámenes en línea y su efectividad para evaluar el aprendizaje adecuado permanece entre docentes y directivos, con especial preocupación en el ámbito de la educación médica por el impacto en la adquisición de competencias clínicas y cognitivas (Ikram & Rabbani, 2021; Comas-Forgas et al., 2021; Cardenas & Rave, 2014; Hamamoto Filho et al., 2021; Gaur et al., 2020). El fraude académico, entendido como acciones deshonestas para obtener ventajas en evaluaciones, es un problema extendido, con altos porcentajes de estudiantes admitiendo prácticas fraudulentas tanto en Colombia como internacionalmente, influenciado significativamente por las TIC (Martínez & Ramírez, 2018; López-Gil & Fernández-López, 2019; Claudia Lucía et al., 2006; Rivera Mata, 2020; Agud, 2014). La pandemia ha intensificado estas preocupaciones, evidenciando un potencial aumento del fraude académico en la educación a distancia, según resultados preliminares del congreso mundial de educación media 2023.
DOI: 10.17632/y7pnp26v68
title: Theoretical estimations of equilibrium and kinetic uranium isotope fractionations-Research data

description: The research data includes vibrational frequencies for the calculation of conventional mass-dependent fractionation factors and |Ψ(0)2| for the calculation of fractionation factors caused by nuclear volume effects of U-bearing species.
DOI: 10.17632/y9wfgyk6nz
title: Generic and adaptive probabilistic safety assessment models: Precursor analysis and multi-purpose utilization

description: Generic probabilistic safety assessment (PSA) models for PWRs and BWRs. The models are computationally light, handy, transparent, user-friendly, and easily adaptable to account for major plant-specificities when needed. They can be utilized for different purposes including: order-of-magnitude precursor analysis, inter-plant risk comparisons, initial risk screening, and research and pedagogic applications especially when no plant-specific PSAs are available.
DOI: 10.3535/9kt-r3a-186
title: †Dalmanellidae Schuchert, 1913

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.48420/26403496.v1
title: Complete research data for: Data-driven Discovery for Robust Optimization of Semiconductor Nanowire Lasers

description: Full dataset supporting the publication "Data-driven Discovery for Robust Optimization of Semiconductor Nanowire Lasers".<br>This includes experimental results from 55,516 individual nanowire lasers using a multitude of experimental techniques, including: photoluminescence spectroscopy, time-correlated single photon counting, optical and electron-microscope imaging and interferometry. Nine different nanowire materials/designs were investigated: InP, GaAs, Zn doped GaAs, AlGaAs/GaAs, CdS, GaN, ZnO and two batches of GaAsP/GaAs.<br>The dataset includes raw data of each experiment, as well as metadata, and parameters extracted from data analysis of each nanowire. The parameters include: nanowire dimensions, optical bandgaps, carrier lifetimes, lasing thresholds and wavelengths, coherence lengths and cavity reflectivities.<br>The dataset enables correlations to be drawn between these independently measured parameters to assess the factors that influence the performance of the nanowire lasers. As discussed in the publication, it was found that it is the carrier lifetimes, and thus the properties of the gain medium, that have the largest impact on the performance.<br>This dataset is a demonstration of the holistic approach to characterisation of optoelectronic nanostructures/devices. The approach is modular and scalable by design, and therefore suitable for characterisation of other NWL material systems, whilst being widely applicable to emerging opto-electronic materials.
DOI: 10.6084/m9.figshare.25226216.v1
title: Homegarden tree inventory

description: A dataset containing the tree inventory for each home garden measured in Durrant et al., 2024.
DOI: 10.6084/m9.figshare.3522719.v1
title: Appendix A. Sampling methods and a table of quantitative density estimates of Lestes damselfly larvae and predators.

description: Sampling methods and a table of quantitative density estimates of Lestes damselfly larvae and predators.
DOI: 10.6084/m9.figshare.3557064.v1
title: Appendix A. Information on plant collections.

description: Information on plant collections.
DOI: 10.3535/62d-lhj-dr2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zw9-r2p-g4k
title: †Glassia Davidson, 1881

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.17085998.v1
title: Trends in utilised vertrbate populations

description: This data set relates to the anlaysis in McRae et al (2021). The raw population data used in this paper is stored in the online LPI database. We have provided a list of species from each category of utilised and managed as this coding in not yet in the public database. Part of the data set includes confidential data which has been shared under an agreement and is not publically available. In this case the species details have been anonymised, but the remaining metadata is available.<br>
DOI: 10.6084/m9.figshare.21434343.v1
title: DataSFA.csv

description: The data describes the inputs and variables that describe dairy farms in the study area.
DOI: 10.6084/m9.figshare.27634824.v1
title: <b>The implications of climate change for New Zealand’s freshwater fish</b>

description: Data from:Canning, Zammit, Death. (2024). The implications of climate change for New Zealand’s freshwater fish. Canadian Journal of Fisheries and Aquatic Sciences.Abstract:Climate change is poised to reshape ecological communities globally by driving species into new environments and altering interactions between species. Conservation efforts should not only address current pressures but also plan for future pressures, such as sensitive species moving into degraded environments or arising problematic trophic interactions. This study sought to assess how climate change may affect the end-of-century distributions of New Zealand’s native and non-native freshwater fish, including consequences for the overlap between trout (a non-native sports fish) and native species vulnerable to trout predation. Random forest modelling was used to predict end-of-century distributions for New Zealand’s freshwater fish based on six hydrologically downscaled global climate models across four representative concentration pathways. Severe climate change impacts could drive nine native fish species to extinction or near-extinction and cause substantial declines in another eight native species. Seven non-natives are also predicted to decline substantially, including a 30-40% reduction in the extent of trout. To avert these potential extinctions, it is crucial to mitigate climate change severity and improve land use impacting freshwater ecosystems.Word Document: 'cjfas-2024-0127' suppla contains Supplementary material A.Excel file: 'cjfas-2024-0127supplb' contains Supplementary material Bcsv file: 'Optimal_Thresholds' contains the probability thresholds that maximised the Kappa statistic when determining presence from probability of occurrence.csv file: 'All preds RF wide' contains the probability of occurrence for all species at all river reaches modelled. Data is in wide format with columns representing individual species, along with a 'Scenario' column indicating the RCP climate, 'Model' column indicating the global circulation model used, and 'nzsegment' indicating the river reach as defined in the New Zealand River Environment Classification system v2.4.csv file: 'All preds binary RF wide' contains the presence (1) or background (0) classification for all species at all river reaches modelled. Data is in wide format with columns representing individual species, along with a 'Scenario' column indicating the RCP climate, 'Model' column indicating the global circulation model used, and 'nzsegment' indicating the river reach as defined in the New Zealand River Environment Classification system v2.4.
DOI: 10.6084/m9.figshare.28606871.v1
title: data

description: Crushing of vehicle
DOI: 10.3535/3ql-f7b-qkv
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4q9-63b-wkk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hz9-z53-1mm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/bvvfvz67z6
title: Parenteral BCG vaccine induces respiratory mucosal-resident memory macrophages and trained innate immunity via the gut-lung axis. Jeyanathan et al.

description: Besides centrally induced innate immune memory/trained immunity in the bone marrow/peripheral blood by parenteral vaccination or infection, recently emerging evidence suggests that the barrier mucosal tissue-resident innate immune memory may develop via a local inflammatory pathway following mucosal immunologic exposure. However, it remains unclear whether the mucosal-resident innate immune memory may result from integrating distally generated immunological signals following parenteral vaccination/infection.  We show here that subcutaneous Bacillus Calmette-Guérin (BCG) vaccination is able to induce memory alveolar macrophages (AM) and trained immunity at the respiratory barrier mucosa. Although parenteral BCG vaccine can centrally train bone marrow progenitors and circulating monocytes, induction of memory AM is entirely independent of circulating monocytes. Rather, parenteral BCG vaccination, via distal mycobacterial dissemination, causes a time-dependent alteration in gut microbiome, barrier function and microbial metabolites including short-chain fatty acids, and subsequently the changes in circulating and lung tissue metabolites, leading to induction of tissue-resident memory macrophages and trained innate immunity in the lung. Our study thus reveals a novel gut microbiota-mediated pathway for innate immune memory development at distal barrier mucosal tissues. Our findings have far-reaching implications in developing next-generation parenteral vaccine strategies against respiratory pathogens such as M.tb.
DOI: 10.3535/c2v-4h3-wrx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f2k-xqk-b1z
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cdx-stz-6g5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q2g-ypb-cdv
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.17284595.v1
title: Enhancers of eight Gossypium species.

description: Enhancers of eight Gossypium species.
DOI: 10.3535/erv-p9m-1m2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lxq-p64-b8l
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23929698.v1
title: 2021+Western+Carolina+University+Student+Needs+Survey_August+10,+2023_17.45.zip

description: This dataset includes the results of a basic needs security survey administered to university students during the spring of 2021 at a regional comprehensive university located in Southern Appalachia.
DOI: 10.6084/m9.figshare.24097872.v1
title: collection of DNA extraction data

description: An excel file with all the DNA extraction data which was collected over the course of my study. Includes piloting results as well.
DOI: 10.17632/88ysp9gn5c
title: SiyuanLi_chamber_chem

description: These data are in service of this paper “Evolution of organic aerosol from wood smoke influenced by burning phase and solar radiation”，including temporal evolution of aerosol compositions and gas during the experiments under different burning phases (FL-light, FL-dark, SM-light and SM-dark experiments).
DOI: 10.3535/eqm-6yy-5zs
title: †Dalmanellidae Schuchert, 1913

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kw9-yq2-7wd
title: †Dalmanellidae Schuchert, 1913

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9eb-5xs-ylc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s1x-fln-vrx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28093925.v1
title: Questionnaires A - G

description: This are questionnaires for a mixed methods study.
DOI: 10.3535/b4n-nnd-76k
title: †Dalmanellidae Schuchert, 1913

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qtt-a9q-f5r
title: Linoporella G. Steinmann, 1899

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28279499.v1
title: PRISMA flow chart -Systematic Review

description: The systematic approach and rigorous methodology employed in this study significantly enhance the credibility and reliability of our findings. By meticulously synthesizing and analysing a diverse range of literature, we have identified key factors influencing the walkability of older adults in the built environment. This comprehensive review not only advances academic knowledge but also offers actionable insights for professionals engaged in urban design and community planning.Furthermore, the implications of our research extend beyond academia. By highlighting the interplay between urban design and human behaviour, our study underscores the importance of prioritizing walkability and accessibility in urban planning initiatives.
DOI: 10.3535/4y3-ntw-p9v
title: Calcite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f77-sw6-ggf
title: Calcite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1141971.v6
title: GHE

description: contains R-code used for the figures and analysis presented in 'The greenhouse effect seen in old physics and new data'
DOI: 10.6084/m9.figshare.21343476.v1
title: 2nd time of test in VHV

description: The second time home assessment was done by a village health volunteer.
DOI: 10.6084/m9.figshare.3544295.v1
title: Appendix I. Site summary matrices A(CR15), A(CR20), A(CR30), and A(PR15) and additional results.

description: Site summary matrices A(CR15), A(CR20), A(CR30), and A(PR15) and additional results.
DOI: 10.3535/53g-p6q-whz
title: Calcite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8qk-1lk-9yt
title: Calcite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m3y-lyr-gz4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.