DOI: 10.22002/69bhs-5n308
title: Thiomonas intermedia

description: T. intermedia cell h9
description: <strong>Tilt Series Date:</strong> 2007-10-05</p>
 
<strong>Data Taken By:</strong> Cristina Iancu</p>
 
<strong>Species / Specimen:</strong> Thiomonas intermedia</p>
 
<strong>Strain:</strong> K12</p>
 
<strong>Tilt Series Settings:</strong> Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 180.0 eV/Å², defocus: -12.0 μm, magnification: 0x. </p>
 
<strong>Acquisition Software:</strong> UCSF Tomo</p>
 
<strong>Upload Method:</strong> rundir</p>
 
<strong>Processing Software Used:</strong> imod</p>
 
 civ2007-10-05-6_slicer4810.jpg: Protein-decorated granule civ2007-10-05-6_slicer4816.jpg: Extracellular vesicle civ2007-10-05-6_slicer4817.jpg: Unknown intermembrane filament
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/rawdata/</p>
 
Ti_mm22h_h9_180e12um18K_5oct07.mrc, Tilt Series (Pixel Size 1.259 nm),1.0 GB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/rawdata/Ti_mm22h_h9_180e12um18K_5oct07.mrc" > <i class="download icon"></i> Download </a>
</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin1.rec, Reconstruction (Pixel Size 0.0 nm),1.0 GB
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</p>
 
 ci2007-10-05-6_clip01.rec, Reconstruction (Pixel Size 0.0 nm) cropped by Sarah, 127.1 MB
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</p>
 
 ci2007-10-05-6_clip02.rec, Reconstruction (Pixel Size 0.0 nm) cropped by Sarah, 100.0 MB
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</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s124_filam2.tif, 2.5 MB
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</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s70_cbxy_gap.tif, 2.5 MB
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</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s119_pPiperiodicsurf.tif, 2.5 MB
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</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s101_filam1.tif, 2.5 MB
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</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s88_pPineedle.tif, 2.5 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2325/Ti_mm22h_h9_180e12um18K_5oct07_bin2_s88_pPineedle.tif" > <i class="download icon"></i> Download </a>
</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s72_gap.tif, 623.7 kB
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</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s107_pPistring1.tif, 2.5 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2327/Ti_mm22h_h9_180e12um18K_5oct07_bin2_s107_pPistring1.tif" > <i class="download icon"></i> Download </a>
</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s80_rotxm28ym7_unusualshapecbxy.tif, 1.5 MB
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</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s88_rotxm24ym24z2_unusualcbxy.tif, 2.5 MB
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</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_s70_unusualshapecbxy.tif, 1.5 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2332/Ti_mm22h_h9_180e12um18K_5oct07_bin2_s70_unusualshapecbxy.tif" > <i class="download icon"></i> Download </a>
</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_5ave_rec_cell1.mov, file associated to 3D Image #4234, 9.8 MB
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</p>
 
 Ti_mm22h_h9_180e12um18K_5oct07_bin2_5ave_rec.mov, file associated to 3D Image #4234, 32.7 MB
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</p>
 
 ci2007-10-05-6_clip01-label-Filament01.am, filament segmented by Sarah, 2.0 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2910/ci2007-10-05-6_clip01-label-Filament01.am" > <i class="download icon"></i> Download </a>
</p>
 
 ci2007-10-05-6_clip01-label-Filament02.am, filament segmented by Sarah, 2.0 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2911/ci2007-10-05-6_clip01-label-Filament02.am" > <i class="download icon"></i> Download </a>
</p>
 
 ci2007-10-05-6_clip01-label-Filament03.am, filament segmented by Sarah, 2.0 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2912/ci2007-10-05-6_clip01-label-Filament03.am" > <i class="download icon"></i> Download </a>
</p>
 
 ci2007-10-05-6_clip01-label-Filament04.am, filament segmented by Sarah, 2.0 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2913/ci2007-10-05-6_clip01-label-Filament04.am" > <i class="download icon"></i> Download </a>
</p>
 
 ci2007-10-05-6_clip01-label-Filament05.am, filament segmented by Sarah, 2.0 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2914/ci2007-10-05-6_clip01-label-Filament05.am" > <i class="download icon"></i> Download </a>
</p>
 
 ci2007-10-05-6_clip02-label-Filament01.am, filament segmented by Sarah, 1.6 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2915/ci2007-10-05-6_clip02-label-Filament01.am" > <i class="download icon"></i> Download </a>
</p>
 
 ci2007-10-05-6_clip02-label-Filament02.am, filament segmented by Sarah, 1.6 MB
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-6/file_2916/ci2007-10-05-6_clip02-label-Filament02.am" > <i class="download icon"></i> Download </a>
</p>