cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48370/ofd/xvttbd
title: Sorex araneus - 2395, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1953-07-19, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/lyxjbz
title: Sorex araneus - 99965, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1971-11-20, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/fgujzi
title: Sorex araneus - 5675, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1954-07-31, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/yk9iq7
title: Sorex araneus - 28123, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1962-06-10, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/qy4nua
title: Sorex araneus - 15529, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-11-05, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/tm3jyp
title: Sorex araneus - 98000, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1971-07-01, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/ybhhwd
title: Sorex araneus - 14951, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-09-27, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/c8cown
title: Sorex araneus - 66467, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1967-10-14, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/iw8o2l
title: Sorex araneus - 28815, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1962-08-20, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/ukavef
title: Sorex araneus - 115076, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1974-09-03, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/fiwmrm
title: Sorex araneus - 110551, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1973-07-30, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/pi7qjp
title: Sorex araneus - 157559, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1988-09-23, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/svks6t
title: Sorex araneus - 72823, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-04-23, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/irguzm
title: Sorex araneus - 15975, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-11-19, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/zvhuwi
title: Sorex araneus - 91578, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1970-07-31, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/brfmfl
title: Sorex araneus - 15256, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-10-08, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/efpp43
title: Sorex araneus - 18242, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1957-06-17, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/uirmqg
title: Sorex araneus - 162215, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1992-07-23, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/tzjf6c
title: Sorex araneus - 62177, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1967-02-23, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/v3iyhq
title: Sorex araneus - 8969, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-06-15, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/zzpc1k
title: Sorex araneus - 3767, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1953-09-19, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/pcchzl
title: Sorex araneus - 106963, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1972-07-30, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/3r3tdg
title: Sorex araneus - 25127, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1961-07-04, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/dkztdg
title: Sorex araneus - 5287, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1954-07-18, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/dupc6k
title: Sorex araneus - 14114, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-09-14, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/dskgjy
title: Sorex araneus - 19893, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1958-04-05, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/okjelv
title: Sorex araneus - 28287, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1962-07-06, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/b2wd8v
title: Sorex araneus - 2599, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1953-07-25, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/naiypu
title: Sorex araneus - 16236, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-12-02, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/i7zvvs
title: Sorex araneus - 4601, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1954-06-12, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/5xtfyg
title: Sorex araneus - 22894, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1959-08-04, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/yoejdc
title: Sorex araneus - 166903, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1998-07-13, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/sk3xxo
title: Sorex araneus - 117466, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1975-09-24, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/rbv66p
title: Sorex araneus - 105258, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1972-06-24, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/rotgua
title: Sorex araneus - 110180, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1973-06-16, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/mfnsea
title: Sorex araneus - 91324, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1970-07-25, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/aabujk
title: Sorex araneus - 7050, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1954-10-25, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/lxhdiz
title: Sorex araneus - 13374, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-09-02, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/xnnvpp
title: Sorex araneus - 19622, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1958-01-01, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/ztotka
title: Sorex araneus - 54651, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1966-10-05, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/hmrk4n
title: Sorex araneus - 106563, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1972-07-15, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/rhd94u
title: Sorex araneus - 120907, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1976-10-25, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/je8x71
title: Sorex araneus - 17048, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1956-07-28, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/n5okdu
title: Sorex araneus - 114294, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1974-08-27, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/aqp8gh
title: Sorex araneus - 117667, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1975-10-18, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/mrzfkm
title: Sorex araneus - 2894, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1953-08-05, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/adsqve
title: Sorex araneus - 32840, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1963-08-20, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/rye7yd
title: Sorex araneus - 99038, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1971-09-04, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/3tdaa3
title: Sorex araneus - 33851, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1963-10-11, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/brzshc
title: Sorex araneus - 162649, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1993-06-20, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/mlzrsi
title: Sorex araneus - 28673, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1962-08-09, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/05lxef
title: Sorex araneus - 52225, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1966-06-29, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/uxwlik
title: Sorex araneus - 17577, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1956-11-06, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/zaqt1v
title: Sorex araneus - 12524, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-08-12, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/8mkdga
title: Sorex araneus - 83933, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-11-13, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/2hhs2g
title: Sorex araneus - 168497, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 2002-07-21, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/eoekhl
title: Sorex araneus - 11635, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-07-26, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/bt4eap
title: Sorex araneus - 17376, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1956-09-11, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/g8hal0
title: Sorex araneus - 75978, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-07-12, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/qt7gth
title: Sorex araneus - 55236, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1966-10-28, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/3qc9pi
title: Sorex araneus - 115775, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1974-10-28, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/ns23pp
title: Sorex araneus - 33916, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1963-10-13, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/hd5qzf
title: Sorex araneus - 3091, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1953-08-13, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/cuwdeg
title: Sorex araneus - 8543, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-06-06, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/gnrqqm
title: Sorex araneus - 104443, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1972-04-08, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/j6v2sz
title: Sorex araneus - 593, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1953-03-31, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/0qcq08
title: Sorex araneus - 1148, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1953-06-02, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/wkiymr
title: Sorex araneus - 8905, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-06-14, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/pveqvf
title: Sorex araneus - 28783, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1962-08-19, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/yygwfu
title: Sorex araneus - 18621, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1957-07-28, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/e7grxn
title: Sorex araneus - 107101, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1972-08-02, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/2x9fjw
title: Sorex araneus - 17759, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1957-01-30, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/ejwwon
title: Sorex araneus - 22396, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1959-06-25, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/15vzle
title: Sorex araneus - 105318, Zoological collection of the Mammal Research Institute, PAS

description: Sorex araneus (Common shrew) from Zoological collection of the Mammal Research Institute, PAS. Collected 1972-06-28, in: Białowieża National Park, Poland. Material type:
DOI: 10.5523/bris.23biszw8gbq6y2rcpkmqonu923
title: PNAS 2024 - multi-scale suckers

description: Included here are data to support the paper:

Tianqi Yue, Weiyong Si, Alex Keller, Chenguang Yang, Hermes Bloomfield-Gadêlha and Jonathan Rossiter, Bioinspired multi-scale adaptive suction on complex dry surfaces enhanced by regulated water secretion, The Proceedings of the National Academy of Sciences (PNAS), 2024.
DOI: 10.5281/zenodo.10379171
title: ROMI - Plant phenotyping test data

description: This is an example and test dataset acquired (real_plant) and generated (virtual_plant and arabidopsis000) in the context of the ROMI's project plant phenotyping effort.

 

Archive configs.zip contains the configuration files used with the romi_run_task CLI to reconstruct the datasets.

The 3 RAW datasets are in the following archives:



arabidospsis000.zip:  72 snapshots of a virtual Arabidopsis thaliana plant generated with the Virtual Plant Imager;

real_plant.zip: 60 images of a Col-0 Arabidopsis thaliana plant acquired with the Plant Imager;

virtual_plant.zip: 18 snapshots of a virtual Arabidopsis thaliana plant generated with the Virtual Plant Imager;


The 2 analyzed datasets are in the following archives:



real_plant_analyzed.zip: the real_plant dataset reconstructed using the AnglesAndInternodes task with the config/test_geom_pipe_real.toml configuration file;

virtual_plant_analyzed.zip: the virtual_plant dataset reconstructed using the AnglesAndInternodes task with the config/test_geom_pipe_virtual.toml configuration file;


To reproduce the reconstruction pipelines from the Plant-3D-Vision library, you may use the roboticsmicrofarms/plant-3d-vision docker image. Have a look at the official documentation here.

Archive  models.zip contains a preconfigured directory structure with the trained CNN weight file Resnet_896_896_epoch50.pt.