cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.9fxh2q
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is incertae sedis",
 "Year is greater than 2013",
 "Geometry MULTIPOLYGON (((14.334292 37.026661,14.337707 37.030571,14.338273 37.030366,14.339259 37.029785,14.339894 37.029291,14.340808 37.028964,14.341233 37.028658,14.341537 37.028537,14.342508 37.028386,14.343474 37.028163,14.344127 37.027919,14.346385 37.02703,14.348302 37.026371,14.348866 37.026131,14.349563 37.025884,14.349009 37.025252,14.35009 37.024501,14.35075 37.024364,14.352306 37.023649,14.354058 37.023176,14.3562 37.021898,14.356394 37.020852,14.356288 37.019354,14.357375 37.018303,14.357784 37.017783,14.357922 37.017204,14.357086 37.016741,14.356742 37.016292,14.356702 37.015721,14.356494 37.015301,14.356782 37.014322,14.357068 37.013951,14.357243 37.013263,14.356639 37.012932,14.356143 37.012848,14.355893 37.012465,14.355065 37.012753,14.354707 37.012734,14.354059 37.012405,14.353609 37.012354,14.35288 37.01278,14.352619 37.012864,14.352258 37.012809,14.351877 37.012468,14.351592 37.01223,14.350636 37.011952,14.350082 37.01169,14.347712 37.014159,14.347285 37.014429,14.345849 37.014959,14.344597 37.015552,14.344068 37.015648,14.343226 37.016366,14.343009 37.016447,14.342507 37.016291,14.342435 37.0159,14.342348 37.01594,14.340712 37.018054,14.340581 37.018095,14.337735 37.019512,14.335818 37.020815,14.334877 37.022038,14.334062 37.023149,14.333265 37.024509,14.330987 37.025756,14.330395 37.026857,14.33019 37.027116,14.329626 37.027356,14.32808 37.028213,14.327461 37.028367,14.327047 37.028486,14.326504 37.029301,14.326571 37.029642,14.326685 37.03005,14.327367 37.030604,14.327857 37.030238,14.329265 37.029521,14.329674 37.029227,14.330232 37.029237,14.330741 37.029145,14.331603 37.02859,14.331997 37.028091,14.332708 37.027818,14.33319 37.027349,14.333458 37.02689,14.334085 37.026655,14.334292 37.026661)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026801-230530130749713/datasets/export for details.
DOI: 10.15468/dl.gv56rp
title: Occurrence Download

description: A dataset containing 3874 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meiosimyza rorida (Fallén, 1820))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3874 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070254-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.enykpk
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ophiorrhiza napoensis H.S.Lo"
 ]
}

 The dataset includes 12 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053323-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ptc4r
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ixodida",
 "Country is Jordan"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050625-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8xytbs
title: Occurrence Download

description: A dataset containing 359 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mycena citricolor (Berk. & M.A.Curtis) Sacc."
 ]
}

 The dataset includes 359 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088096-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.knte6b
title: Occurrence Download

description: A dataset containing 804 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mutisia spinosa Ruiz & Pav."
 ]
}

 The dataset includes 804 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044539-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q7wn7r
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Pogonia yunnanensis Finet"
 ]
}

 The dataset includes 31 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050630-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fcuzz2
title: Occurrence Download

description: A dataset containing 316468 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poa nemoralis L."
 ]
}

 The dataset includes 316468 records from 1399 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088097-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e2xarh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poa annua Steud., 1854"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043598-241126133413365/datasets/export for details.
DOI: 10.15468/dl.tdbdbx
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachurus symmetricus (Ayres, 1855)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 245 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043599-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5y3vvu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea stoebe Ten."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043602-241126133413365/datasets/export for details.
DOI: 10.15468/dl.fzfpvw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Puccinia poae-annuae Vienn.-Bourg."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043603-241126133413365/datasets/export for details.
DOI: 10.15468/dl.vw9twn
title: Occurrence Download

description: A dataset containing 3698 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus niveus Thunb."
 ]
}

 The dataset includes 3698 records from 143 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043601-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.7334816
title: Data from: Sex-determining 3D regulatory hubs revealed by genome spatial auto-correlation analysis

description: Mammalian sex is determined by opposing networks of ovarian and testicular genes that are well characterized. However, its epigenetic regulation is still largely unknown, thus limiting our understanding of a fundamental process for species propagation. Here we explore the 3D chromatin landscape of sex determination <em>in vivo</em>, using <em>METALoci</em>, a novel genome spatial auto-correlation analysis. <strong>Extended Data File 1: Coordinates for HH metaloci in each sample.</strong> The EDFile1_H3K27ac_HH_metaloci_per_gene.zip file contains four files named: XX10.5_H3K27ac_HH_metaloci_per_gene.bed XX13.5_H3K27ac_HH_metaloci_per_gene.bed XY10.5_H3K27ac_HH_metaloci_per_gene.bed XY13.5_H3K27ac_HH_metaloci_per_gene.bed Each BED file contains the following columns tab separated: chr Chromosome start Start coordinates end End coordinates MetaLociBinNumber Number of the bin in the METALoci layout GeneSymbol Gene symbol <strong>Extended Data File 2: Coordinates for all TFs assessed by TOBIAS to bind an ATAC-seq accessible peak within a metaloci in each sample.</strong> The TEDFile2_TF_ATAC_ML_Sites.zip file contains four files named: XX10.5_TF_ATAC_ML_Sites.tsv XX13.5_TF_ATAC_ML_Sites.tsv XY10.5_TF_ATAC_ML_Sites.tsv XY13.5_TF_ATAC_ML_Sites.tsv Each TSV file contains the following columns tab separated: chr Motif site chromosome start Motif site start coordinates end Motif site end coordinates tfscore TOBIAS transcription factor score strand Motif site strand pchr ATAC site chromosome pstart ATAC site start coordinates pend ATAC site end coordinates samplescore TOBIAS sample score bchr METALoci chromosome bstart METALoci start coordinates bend METALoci end coordinates bin METALoci bin gene Gene symbol tf Transcription Factor motif Motif id
DOI: 10.5281/zenodo.11066420
title: Data from: Sex-determining 3D regulatory hubs revealed by genome spatial auto-correlation analysis

description: Mammalian sex is determined by opposing networks of ovarian and testicular genes that are well characterized. However, its epigenetic regulation is still largely unknown, thus limiting our understanding of a fundamental process for species propagation. Here we explore the 3D chromatin landscape of sex determination in vivo, using METALoci, a novel genome spatial auto-correlation analysis.

Extended Data File 1: Coordinates for HH metaloci in each sample.

The EDFile1_H3K27ac_HH_metaloci_per_gene.zip file contains four files named:



XX10.5_H3K27ac_HH_metaloci_per_gene.bed

XX13.5_H3K27ac_HH_metaloci_per_gene.bed

XY10.5_H3K27ac_HH_metaloci_per_gene.bed

XY13.5_H3K27ac_HH_metaloci_per_gene.bed


Each BED file contains the following columns tab separated:



chr                  Chromosome

start                Start coordinates

end                  End coordinates

MetaLociBinNumber     Number of the bin in the METALoci layout

GeneSymbol            Gene symbol


 

Extended Data File 2: Coordinates bins in METALoci with ATAC-seq accessible peak targeted by TF.

The EDFile2_TF_ATAC_ML_Sites.zip file contains four files named:



XX10.5_TF_ATAC_ML_Sites.tsv

XX13.5_TF_ATAC_ML_Sites.tsv

XY10.5_TF_ATAC_ML_Sites.tsv

XY13.5_TF_ATAC_ML_Sites.tsv


Each TSV file contains the following columns tab separated:



chr            Motif site chromosome 

start          Motif site start coordinates 

end            Motif site end coordinates

bin            Hi-C bin number

pchr           ATAC site chromosome

pstart         ATAC site start coordinates

pend           ATAC site end coordinates

gene           Gene symbol
DOI: 10.5281/zenodo.7334815
title: Data from: Sex-determining 3D regulatory hubs revealed by genome spatial auto-correlation analysis

description: Mammalian sex is determined by opposing networks of ovarian and testicular genes that are well characterized. However, its epigenetic regulation is still largely unknown, thus limiting our understanding of a fundamental process for species propagation. Here we explore the 3D chromatin landscape of sex determination in vivo, using METALoci, a novel genome spatial auto-correlation analysis.

Extended Data File 1: Coordinates for HH metaloci in each sample.

The EDFile1_H3K27ac_HH_metaloci_per_gene.zip file contains four files named:



XX10.5_H3K27ac_HH_metaloci_per_gene.bed

XX13.5_H3K27ac_HH_metaloci_per_gene.bed

XY10.5_H3K27ac_HH_metaloci_per_gene.bed

XY13.5_H3K27ac_HH_metaloci_per_gene.bed


Each BED file contains the following columns tab separated:



chr                  Chromosome

start                Start coordinates

end                  End coordinates

MetaLociBinNumber     Number of the bin in the METALoci layout

GeneSymbol            Gene symbol


 

Extended Data File 2: Coordinates bins in METALoci with ATAC-seq accessible peak targeted by TF.

The EDFile2_TF_ATAC_ML_Sites.zip file contains four files named:



XX10.5_TF_ATAC_ML_Sites.tsv

XX13.5_TF_ATAC_ML_Sites.tsv

XY10.5_TF_ATAC_ML_Sites.tsv

XY13.5_TF_ATAC_ML_Sites.tsv


Each TSV file contains the following columns tab separated:



chr            Motif site chromosome 

start          Motif site start coordinates 

end            Motif site end coordinates

bin            Hi-C bin number

pchr           ATAC site chromosome

pstart         ATAC site start coordinates

pend           ATAC site end coordinates

gene           Gene symbol
DOI: 10.15468/dl.e273zp
title: Occurrence Download

description: A dataset containing 9871 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachurus trachurus (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 9871 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043604-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9qb9ak
title: Occurrence Download

description: A dataset containing 820 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-7.47621 35.85097,-2.4588 36.18146,-0.98662 37.62359,-7.49857 38.26751,-7.47621 35.85097))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Trachemys scripta (Thunberg In Schoepff, 1792)"
 ]
}

 The dataset includes 820 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043605-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5zr5cg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ustilago poae-annuae W.H.Davis"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043608-241126133413365/datasets/export for details.
DOI: 10.15468/dl.s8vx4r
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus niveus Wall."
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043607-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q45cah
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea stoebe Ledeb."
 ]
}

 The dataset includes 28 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043606-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28070345
title: Muestra_contemporánea_completa M_tradicional

description: Mediciones lineales de la muestra contemporánea que conforma la tesis doctoral
DOI: 10.6084/m9.figshare.28070345.v1
title: Muestra_contemporánea_completa M_tradicional

description: Mediciones lineales de la muestra contemporánea que conforma la tesis doctoral
DOI: 10.15468/dl.9auq6x
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachyrincus murrayi Günther, 1887",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 15 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043610-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4d8abu
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus niveus Wall. ex G.Don"
 ]
}

 The dataset includes 72 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043611-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x9jgwm
title: Occurrence Download

description: A dataset containing 10685 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Living Specimen, Specimen, Material citation, Observation, Material sample)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Triticum turgidum L.",
 "Year 1970-2024"
 ]
}

 The dataset includes 10685 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043609-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7yps5z
title: Occurrence Download

description: A dataset containing 583 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poa annua × supina"
 ]
}

 The dataset includes 583 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043612-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3ahkj
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is one of (Malurus cyaneus samueli Mathews, 1912)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043613-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bnqzbz
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea stoebe Tausch"
 ]
}

 The dataset includes 61 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043614-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4vvm63
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachyrincus scabrus (Rafinesque, 1810)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 66 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043615-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14531136
title: ELOBIO deliverable D19 : Simplified ELOBIO sustainability models and estimated data

description: The data presented here were utilized to develop simplified models for the Life Cycle Sustainability Assessment (LCSA) within the European Pathfinder project ELOBIO (Electrolysis of Biomass, No. 101070856), funded by the European Innovation Council.
DOI: 10.5281/zenodo.14534103
title: ELOBIO deliverable D19 : Simplified ELOBIO sustainability models and estimated data

description: The data presented here were utilized to develop simplified models for the Life Cycle Sustainability Assessment (LCSA) within the European Pathfinder project ELOBIO (Electrolysis of Biomass, No. 101070856), funded by the European Innovation Council.
DOI: 10.5281/zenodo.14531135
title: ELOBIO deliverable D19 : Simplified ELOBIO sustainability models and estimated data

description: The data presented here were utilized to develop simplified models for the Life Cycle Sustainability Assessment (LCSA) within the European Pathfinder project ELOBIO (Electrolysis of Biomass, No. 101070856), funded by the European Innovation Council.
DOI: 10.5281/zenodo.14534856
title: ELOBIO deliverable D19 : Simplified ELOBIO sustainability models and estimated data

description: The data presented here were utilized to develop simplified models for the Life Cycle Sustainability Assessment (LCSA) within the European Pathfinder project ELOBIO (Electrolysis of Biomass, No. 101070856), funded by the European Innovation Council.
DOI: 10.15468/dl.5yajzd
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poa annua x supina"
 ]
}

 The dataset includes 91 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043617-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n893q4
title: Occurrence Download

description: A dataset containing 4324 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panicum coloratum L."
 ]
}

 The dataset includes 4324 records from 135 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043616-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.