cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25845613
title: GA-3Y

description: GA-3Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-3Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845613.v1
title: GA-3Y

description: GA-3Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-3Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845616.v1
title: EA-5Y

description: EA-5Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EA-5Y:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>5: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845619
title: EK-5Y

description: EK-5Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-5Y:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>5: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.60712/si-id158471.1
title: StrainInfo SI-ID 158471.1

description: StrainInfo dataset 158471 about a strain of Penicillium flavigenum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id158472.1
title: StrainInfo SI-ID 158472.1

description: StrainInfo dataset 158472 about a strain of Penicillium flavigenum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845616
title: EA-5Y

description: EA-5Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EA-5Y:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>5: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845619.v1
title: EK-5Y

description: EK-5Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-5Y:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>5: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845622
title: EA-4B

description: EA-4B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EA-4B:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>4: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845625.v1
title: EC-2G

description: EC-2G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EC-2G:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.60712/si-id158473.1
title: StrainInfo SI-ID 158473.1

description: StrainInfo dataset 158473 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845622.v1
title: EA-4B

description: EA-4B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EA-4B:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>4: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845625
title: EC-2G

description: EC-2G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EC-2G:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845628
title: GC-8P

description: GC-8P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-8P:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>8: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845628.v1
title: GC-8P

description: GC-8P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-8P:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>8: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845631
title: GA-7B

description: GA-7B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-7B:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>7: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845631.v1
title: GA-7B

description: GA-7B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GA-7B:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>7: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845634
title: GK-4G

description: GK-4G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GK-4G:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>4: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.60712/si-id158538.1
title: StrainInfo SI-ID 158538.1

description: StrainInfo dataset 158538 about a strain of Phytophthora boehmeriae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845430.v1
title: AA-2B

description: AA-2B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-2B:<br>A: Denotes the strain control group.<br>A: Represents timepoint 2, indicating sampling before PBS.<br>2: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845433
title: AK-2P

description: AK-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-2P:<br>A: Denotes the control group.<br>K: Represents timepoint 3, indicating sampling after PBS.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845634.v1
title: GK-4G

description: GK-4G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GK-4G:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>4: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845637
title: GC-4Y

description: GC-4Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-4Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>4: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845637.v1
title: GC-4Y

description: GC-4Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-4Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>4: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.60712/si-id158539.1
title: StrainInfo SI-ID 158539.1

description: StrainInfo dataset 158539 about a strain of Fusarium acuminatum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id158540.1
title: StrainInfo SI-ID 158540.1

description: StrainInfo dataset 158540 about a strain of Solheimia costispora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845430
title: AA-2B

description: AA-2B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-2B:<br>A: Denotes the strain control group.<br>A: Represents timepoint 2, indicating sampling before PBS.<br>2: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845433.v1
title: AK-2P

description: AK-2P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-2P:<br>A: Denotes the control group.<br>K: Represents timepoint 3, indicating sampling after PBS.<br>2: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845436
title: AC-2B

description: AC-2B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AC-2B :<br>A: Denotes the strain control group.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845436.v1
title: AC-2B

description: AC-2B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AC-2B :<br>A: Denotes the strain control group.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>2: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845439
title: AK-2B

description: AK-2B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-2B:<br>A: Denotes the control group.<br>K: Represents timepoint 3, indicating sampling after PBS.<br>2: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845439.v1
title: AK-2B

description: AK-2B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-2B:<br>A: Denotes the control group.<br>K: Represents timepoint 3, indicating sampling after PBS.<br>2: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.60712/si-id158541.1
title: StrainInfo SI-ID 158541.1

description: StrainInfo dataset 158541 about a strain of Aspergillus fischeri var. fischeri. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.