cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.5rc70
title: Data from: Terrestrial arthropods of Steel Creek, Buffalo National River, Arkansas. II. Sawflies (Insecta: Hymenoptera: "Symphyta")

description: Background: This is the second in a series of papers detailing the
 terrestrial arthropods collected during an intensive survey of a site near
 Steel Creek campground along the Buffalo National River in Arkansas. The
 survey was conducted over a period of eight and a half months using twelve
 trap types – Malaise traps, canopy traps (upper and lower collector),
 Lindgren multifunnel traps (black, green, and purple), pan traps (blue,
 purple, red, white, and yellow), and pitfall traps – and Berlese-Tullgren
 extraction of leaf litter. New information: We provide collection records
 for 47 species of "Symphyta" (Insecta: Hymenoptera), 30 of which
 are new state records for Arkansas: (Argidae) Sterictiphora serotina;
 (Cimbicidae) Abia americana; (Diprionidae) Monoctenus fulvus; (Orussidae)
 Orussus terminalis; (Pamphiliidae) Onycholyda luteicornis, Pamphilius
 ocreatus, P. persicum, P. rileyi; (Pergidae) Acordulecera dorsalis, A.
 mellina, A. pellucida; (Tenthredinidae) Caliroa quercuscoccineae, Empria
 coryli, Hoplocampa marlatti, Macrophya cassandra, Monophadnoides
 conspiculatus, Monophadnus bakeri, Nematus abbotii, Neopareophora litura,
 Pachynematus corniger, Paracharactus rudis, Periclista marginicollis,
 Pristiphora banski, P. chlorea, Strongylogaster impressata, S. remota,
 Taxonus epicera, Thrinax albidopictus, T. multicinctus, Zaschizonyx
 montana; (Xiphydriidae) Xiphydria tibialis.
description: DawrinCode records -
 SymphytaThis dataset includes
 records for "Symphyta" collected near Steel Creek campground
 along the Buffalo Nation River in Newton County, Arkansas. The dataset
 uses DarwinCore standard column headings, which are explained in the
 ReadMe file.Steel Creek Symphyta -
 DarwinCore.xlsx
DOI: 10.5061/dryad.8845
title: Data from: A meta-analysis of factors affecting local adaptation between interacting species

description: Adaptive divergence among populations can result in local adaptation,
 whereby genotypes in native environments exhibit greater fitness than
 genotypes in novel environments. A body of theory has developed that
 predicts how different species traits, such as rates of gene flow and
 generation times, influence local adaptation in coevolutionary species
 interactions. We used a meta‐analysis of local‐adaptation studies across a
 broad range of host‐parasite interactions to evaluate predictions about
 the effect of species traits on local adaptation. We also evaluated how
 experimental design influences the outcome of local adaptation
 experiments. In reciprocally designed experiments, the relative gene flow
 rate of hosts versus parasites was the strongest predictor of local
 adaptation, with significant parasite local adaptation only in the studies
 in which parasites had greater gene flow rates than their hosts. When
 nonreciprocal studies were included in analyses, species traits did not
 explain significant variation in local adaptation, although the overall
 level of local adaptation observed was lower in the nonreciprocal than in
 the reciprocal studies. This formal meta‐analysis across a diversity of
 host‐parasite systems lends insight into the role of both biology (species
 traits) and biologists (experimental design) in detecting local adaptation
 in coevolving species interactions.
description: Summary data for the
 studies used in the meta-analysis of local adaptation (Table 1 from the
 publication)This table contains the
 data used in this published meta-analysis. The data were originally
 extracted from the publications listed in the table. The file corresponds
 to Table 1 in the original publication.tb1.xlsSAS script used to perform meta-analysesThis file contains the essential elements of the SAS script used to perform meta-analyses published in Hoeksema & Forde 2008. Multi-factor models were fit to the data using weighted maximum likelihood estimation of parameters in a mixed model framework, using SAS PROC MIXED, in which the species traits and experimental design factors were considered fixed effects, and a random between-studies variance component was estimated. Significance (at alpha = 0.05) of individual factors in these models was determined using randomization procedures with 10,000 iterations (performed with a combination of macros in SAS), in which effect sizes and their weights were randomly permuted among levels of the independent variables.SAS_code_for_Dryad.pdfSAS_code_for_Dryad.txt
DOI: 10.5061/dryad.cg54j
title: Data from: Parental care mitigates carry-over effects of poor early conditions on offspring growth

description: Poor developmental conditions can have long-lasting negative effects on
 offspring phenotypes, but impacts often differ among species. Contrasting
 responses may reflect disparities in experimental protocols among
 single-species studies or inherent differences among species in their
 sensitivity to early conditions and/or ability to mitigate negative
 impacts. We used a common experimental protocol to assess and compare the
 role of parental care in mitigating effects of poor early conditions on
 offspring among 4 sympatric bird species in the wild. We experimentally
 induced low incubation temperatures and examined effects on embryonic
 developmental rates, hatching success, nestling growth rates, and parental
 responses. We examined the generality of these effects across 4 species
 that differ in their phylogenetic history, breeding ecology, and life
 histories. We found that cooling led to delayed hatching in all species,
 but carry-over effects on offspring differed among species. Parents of
 some but not all species increased their offspring provisioning rates in
 response to experimental cooling with critical benefits for offspring
 growth rates. Our study shows for the first time that species exhibit
 clear differences in the degree to which they are affected by poor early
 conditions. Observed differences among species demonstrate that parental
 care is a critical mechanism for mitigating potential negative effects on
 offspring and suggest that parental responses may be constrained to
 varying degrees by ecology and life histories.
description: Incubation and
 HatchingFeeding and brooding
 ratesGHJU Nestling
 growthHOWR Nestling
 growthRFWA Nestling
 growthWEBL Nestling
 growth
DOI: 10.5061/dryad.8bv8p
title: Data from: Complementary and alternative asthma treatments and their association with asthma control: a population-based study

description: Objectives: Many patients with asthma spend time and resources consuming
 complementary and alternative medicines (CAMs). This study explores
 whether CAM utilization is associated with asthma control and the intake
 of asthma controller medications. Design: Population-based, prospective
 cross-sectional study Setting: general population residing in two census
 areas in the province of British Columbia, Canada. Recruitment was based
 on random-digit dialing of both landlines and cell phones. Participants:
 486 patients with self-reported physician-diagnosis of asthma (mean age 52
 years; 67.3% female). Primary and secondary outcome measures: We assessed
 CAM use over the previous 12 months, level of asthma control as defined by
 the Global Initiative for Asthma (GINA), and the self-reported intake of
 controller medications. Multivariate logistic regression was performed to
 study the relationship between any usage of CAMs (outcome), asthma control
 and controller medication usage, adjusted for potential confounders.
 Results: A total of 179 (36.8%) of the sample reported CAM usage in the
 past 12 months. Breathing exercises (17.7%), herbal medicines (10.1%), and
 vitamins (9.7%) were the most popular CAMs reported. After adjustment,
 female sex (OR: 1.66; 95% CI: 1.09-2.52) and uncontrolled asthma( vs.
 controlled asthma, OR: 2.25, 95% CI: 1.30-3.89) were associated with a
 higher likelihood of using any CAMs in the past 12 months. Controller
 medication use was not associated with CAM usage in general and in the
 subgroups defined by asthma control. Conclusion: Clinicians and policy
 makers need to be aware of the high prevalence of CAM use in patients with
 asthma and its association with lack of asthma control.
description: Full dataset for CAM
 manuscript (bmjopen-2013-003360.R1)This dataset contains
 the complete information for the statistical analysis of this publication.
 The data were collected in the field. The titles of variables were
 self-explanary. For binary variables, "Yes" was commonly coded
 as 1 and "No" as 0. For the variable of asthma control
 ("Control"), "controlled" was coded as 0,
 "partially controlled" as 1 and "uncontrolled" as 2.
 "CAM_types" reported all different types of complementary and
 alternative asthma medicines which the patients received in the past 12
 months.CAMpaper_fulldata.xlsx
DOI: 10.5061/dryad.4h263
title: Data from: Honey bees modulate their olfactory learning in the presence of hornet predators and alarm component

description: In Southeast Asia the native honey bee species Apis cerana is often
 attacked by hornets (Vespa velutina), mainly in the period from April to
 November. During the co-evolution of these two species honey bees have
 developed several strategies to defend themselves such as learning the
 odors of hornets and releasing alarm components to inform other mates.
 However, so far little is known about whether and how honey bees modulate
 their olfactory learning in the presence of the hornet predator and alarm
 components of honey bee itself. In the present study, we test for
 associative olfactory learning of A. cerana in the presence of predator
 odors, the alarm pheromone component isopentyl acetate (IPA), or a floral
 odor (hexanal) as a control. The results show that bees can detect live
 hornet odors, that there is almost no association between the innately
 aversive hornet odor and the appetitive stimulus sucrose, and that IPA is
 less well associated with an appetitive stimulus when compared with a
 floral odor. In order to imitate natural conditions, e.g. when bees are
 foraging on flowers and a predator shows up, or alarm pheromone is
 released by a captured mate, we tested combinations of the hornet odor and
 floral odor, or IPA and floral odor. Both of these combinations led to
 reduced learning scores. This study aims to contribute to a better
 understanding of the prey-predator system between A. cerana and V.
 velutina.
description: Modulation of olfactory
 learning in honey bees dataPlos one
 data.xls
DOI: 10.5061/dryad.td0g3
title: Data from: Resurrection ecology in Artemia

description: Resurrection Ecology (RE) is a very powerful approach to address a wide
 range of question in ecology and evolution. This approach rests on using
 appropriate model systems, and only few are known to be available. In this
 paper, we show that Artemia has multiple attractive features (short
 generation time, cyst bank and collections, well documented phylogeography
 and ecology) for a good RE model. We show in detail with a case study how
 cysts can be recovered from sediments to document the history and dynamics
 of a biological invasion. We finally discuss with precise examples the
 many RE possibilities with this model system: adaptation to climate
 change, to pollution, to parasites, to invaders and evolution of
 reproductive systems.
description: core
 datationData for the core
 datation
DOI: 10.5061/dryad.8k3423ts
title: Data from: Scale-specific sex-biased dispersal in the Valais shrew unveiled by genetic variation on the Y chromosome, autosomes, and mitochondrial DNA

description: We investigated sex-specificities in the evolutionary processes shaping Y
 chromosome, autosomes and mitochondrial DNA patterns of genetic structure
 in the Valais shrew (Sorex antinorii), a mountain dwelling species with a
 hierarchical distribution. Both hierarchical analyses of variance and
 isolation-by-distance analyses revealed patterns of population structure
 that were not consistent across maternal, paternal and bi-parentally
 inherited markers. Differentiation on a Y microsatellite was lower than
 expected from the comparison with autosomal microsatellites and mtDNA, and
 it was mostly due to genetic variance among populations within valleys,
 while the opposite was observed on other markers. In addition, there was
 no pattern of isolation-by-distance for the Y, while there was strong
 isolation-by-distance on mtDNA and autosomes. We use a hierarchical island
 model of coancestry dynamics to discuss the relative roles of the
 micro-evolutionary forces that may induce such patterns. We conclude that
 sex-biased dispersal is the most important driver of the observed genetic
 structure, but with an intriguing twist: it seems that dispersal is
 strongly male-biased at large spatial scale, while it is mildly biased in
 favour of females at local scale. These results add to recent reports of
 scale-specific sex-biased dispersal patterns, and emphasize the usefulness
 of the Y chromosome in conjunction with mtDNA and autosomes to infer
 sex-specificities.
description: RawData_Yannic_et_al_Evolution_2011Genotypes obtained for S.antinorii at 8 autosomal microsatellites, a Y-linked microsatellite and mtDNA control region.
DOI: 10.5061/dryad.8cv2n
title: Data from: Intrinsic and extrinsic drivers of source-sink dynamics

description: Many factors affect the presence and exchange of individuals among
 subpopulations and influence not only the emergence, but the strength of
 ensuing source–sink dynamics within metapopulations. Yet their relative
 contributions remain largely unexplored. To help identify the
 characteristics of empirical systems that are likely to exhibit strong
 versus weak source–sink dynamics and inform their differential management,
 we compared the relative roles of influential factors in strengthening
 source–sink dynamics. In a series of controlled experiments within a
 spatially explicit individual-based model framework, we varied patch
 quality, patch size, the dispersion of high- and low-quality patches,
 population growth rates, dispersal distances, and environmental
 stochasticity in a factorial design. We then recorded source–sink dynamics
 that emerged from the simulated habitat and population factors. Long-term
 differences in births and deaths were quantified for sources and sinks in
 each system and used in a statistical model to rank the influences of key
 factors. Our results suggest that systems with species capable of rapid
 growth, occupying habitat patches with more disparate qualities, with
 interspersed higher- and lower-quality habitats, and that experience
 relatively stable environments (i.e., fewer negative perturbations) are
 more likely to exhibit strong source–sink dynamics. Strong source–sink
 dynamics emerged under diverse combinations of factors, suggesting that
 simple inferences of process from pattern will likely be inadequate to
 predict and assess the strength of source–sink dynamics. Our results also
 suggest that it may be more difficult to detect and accurately measure
 source–sink dynamics in slow-growing populations, highly variable
 environments, and where a subtle gradient of habitat quality exists.
description: SourceSinkDriversWorkspaceForDryadProvides simulation files for the HexSim workspace along with a metadata file and instructions on where to find the free and publicly available software.
DOI: 10.5061/dryad.pk85d
title: Data from: Interactions of multisensory components perceptually rescue túngara frog mating signals

description: Sexual signals are often complex and perceived by multiple senses. How
 animals integrate signal components across sensory modalities can
 influence signal evolution. Here we show that two relatively unattractive
 signals that are perceived acoustically and visually can be combined in a
 pattern to form a signal that is attractive to female túngara frogs. Such
 unanticipated perceptual effects suggest that the evolution of complex
 signals can occur by alteration of the relationships among
 already-existing traits.
description: Tungara frog multimodal
 choice test dataResults from two-choice
 experiments where female tungara frogs were allowed to choose among
 combinations of acoustic and visual components of male mating signals. All
 frogs were wild-collected from the field in the Republic of
 Panama.Taylor
 data.xlsx
DOI: 10.71947/arim.jpmxp1225nm2042-1
title: RIE-101iPHにおけるレジスト材料のエッチングレート比較
DOI: 10.5061/dryad.7t4s040
title: Data from: Interspecific transfer of parasites following a range-shift in Ficedula flycatchers

description: Human-induced climate change is expected to cause major biotic changes in
 species distributions and thereby including escalation of novel
 host-parasite associations. Closely related host species that come into
 secondary contact are especially likely to exchange parasites and
 pathogens. Two competing theories, the Enemy Release Hypothesis, where
 invading hosts escape their original parasites; and the Novel Weapon
 Hypothesis, where invading hosts bring new parasites that have detrimental
 effects on native hosts, have been described to predict what will happen
 after a host range-shift. However, few studies evaluate the occurrence of
 interspecific parasite transfer by performing wide-scale geographic
 sampling of pathogen lineages, both within and far from host contact
 zones. In this study, we investigate how haemosporidian (avian malaria)
 prevalence and lineage diversity vary in two, closely related species of
 passerine birds; the pied flycatcher Ficedula hypoleuca and the collared
 flycatcher F. albicollis in both allopatry and sympatry. We find that host
 species is generally a better predictor of parasite diversity than
 location, but both prevalence and diversity of parasites vary widely among
 populations of the same bird species. We also find a limited and
 unidirectional transfer of parasites from pied flycatchers to collared
 flycatchers in a recent contact zone. This study therefore rejects both
 the Enemy Release Hypothesis and the Novel Weapon Hypothesis and
 highlights the complexity and importance of studying host-parasite
 relationships in an era of global climate change and species range-shifts.
description: Location and infection
 information from individuals in the studydryad.xlsx
DOI: 10.71947/arim.jpmxp1225nm2042-2
title: RIE-200NLにおけるレジスト材料のエッチングレート比較
DOI: 10.5061/dryad.qt14r
title: Data from: The consequences of co-infections for parasite transmission in the mosquito Aedes aegypti

description: 1)Co-infections may modify parasite transmission opportunities directly as
 a consequence of interactions in the within host environment, but also
 indirectly through changes in host life-history. Furthermore, host and
 parasite traits are sensitive to the abiotic environment with variable
 consequences for parasite transmission in co-infections. (2)We investigate
 how co-infection of the mosquito Aedes aegypti with two microsporidian
 parasites (Vavraia culicis and Edhazardia aedis) at two levels of larval
 food availability affects parasite transmission directly, and indirectly
 through effects on host traits (3)In a laboratory infection experiment we
 compared how co-infection, at low and high larval food availability,
 affected the probability of infection, within-host growth and the
 transmission potential of each parasite, compared to single infections.
 Horizontal transmission was deemed possible for both parasites when
 infected hosts died harbouring horizontally-transmitting spores. Vertical
 transmission was judged possible for E. aedis when infected females
 emerged as adults. We also compared the total input number of spores used
 to seed infections with output number, in single and co-infections for
 each parasite. (4)The effects of co-infection on parasite fitness were
 complex, especially for V. culicis. In low larval food conditions,
 co-infection increased the chances of mosquitoes dying as larvae or pupae,
 thus increasing opportunities for V. culicis’ horizontal transmission.
 However, co-infection reduced larval longevity and hence time available
 for V. culicis spore production. Overall there was a negative net effect
 of co-infection on V. culicis whereby the number of spores produced was
 less than the number used to seed infection. Co-infections also negatively
 affected horizontal transmission of the more virulent parasite, E. aedis,
 through reduced longevity of pre-adult hosts. However, its potential
 transmission suffered less relative to V. culicis. (5)Our results show
 that co-infection can negatively affect parasite transmission
 opportunities, both directly as well as indirectly via effects on host
 life-history. We also find that transmission is contingent on the combined
 effect of the abiotic environment.
description: Duncan_ParasiteTransmission_Coinfections
DOI: 10.5061/dryad.j6k1j
title: Data from: Males that drop a sexually-selected weapon grow larger testes

description: Costly sexually-selected weapons are predicted to trade off with
 post-copulatory traits, such as testes. Although weapons can be important
 for achieving access to females, individuals of some species can
 permanently drop (i.e. autotomize) their weapons to escape danger. We
 capitalized on this natural behavior to experimentally address whether the
 loss of a sexually-selected weapon leads to increased testes investment in
 the leaf-footed cactus bug, Narnia femorata (Hemiptera: Coreidae). In a
 second experiment, we measured offspring production for males that lost a
 weapon during development. We found that those that dropped a hind limb
 during development grew significantly larger testes than the control
 treatments. Hind-limb autotomy did not result in the enlargement of other
 nearby traits. Our results are the first to show that males may compensate
 for natural weapon loss by investing more in testes. In a second
 experiment we found that females paired with males that lost a hind limb
 had 40% lower egg hatching success. Yet, in those cases where viable
 offspring were produced, males missing a hind limb produced 42% more
 offspring than males with intact limbs. These results suggest that the
 loss of a hind-limb weapon can, in some cases, lead to greater
 fertilization success.
description: Data set for Joseph,
 Emberts, Sasson, and Miller 2017 EvolutionThis file includes data
 from two experiments, 1) investment in testes and nearby traits when a
 weapon is autotomized during development versus when a weapon is not
 autotomized 2) offspring production for males with and without autotomy. A
 "READ ME" tab is included in the file that explains all the
 headers.Final Joseph_tradeoff data
 (DRYAD).xlsx