cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30108192.v1
title: Mapping review of musician well-being literature

description: While musician health literature has grown significantly in the past three decades, a holistic understanding of musician well-being remains lacking. This mapping review aimed to create a topographical review of existing literature on musician well-being to identify key knowledge gaps. This review sought to identify the aspects of musician well-being that have recently been studied, the musician populations that have been studied, and the study designs that have been used to assess musician well-being. This mapping review design was informed by the Focused Mapping Review and Synthesis (FMRS) approach. Studies were categorized and visualized based on study design, type of musician sampled (i.e., profession, instrument, musical genre), and well-being determinants, using the Ecology of Musical Performance (EMP) Model as a foundational framework. This review found that the majority of well-being studies identified focused on musculoskeletal health. Additionally, few intervention studies were identified, and all involved samples of music students in intervention studies were in K-12 or higher education programs. While the EMP model proposes a holistic approach to understanding musician well-being, many crucial well-being determinants highlighted by the model have not been recently studied within the musician health research. Addressing these gaps will provide a more comprehensive foundation for improving the health and well-being of all musicians.
DOI: 10.15468/dl.zkt8ud
title: Occurrence Download

description: A dataset containing 1059 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is greater than or equal to 1900",
 "TaxonKey is Bouteloua simplex"
 ]
}

 The dataset includes 1059 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009947-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xrgzyy
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Spain, Portugal, Ireland, Guadeloupe, Italy, Greece, France)",
 "OccurrenceStatus is Present",
 "TaxonKey is Sergia robusta",
 "Year 1950-1998"
 ]
}

 The dataset includes 92 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009948-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jvu7yh
title: Occurrence Download

description: A dataset containing 37201 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is one of (Crassula helmsii, Lithobates catesbeianus, Misgurnus mohoity, Myriophyllum aquaticum, Procambarus clarkii, Procambarus virginalis, Xenopus laevis, Zizania latifolia)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 37201 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009943-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14812652
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.ukgg5q
title: Occurrence Download

description: A dataset containing 3952234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Archilochus colubris"
 ]
}

 The dataset includes 3952234 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009894-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3pad9c
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lemurella culicifera",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 35 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009949-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ukx442
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mimosa dasilvae",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009951-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vyf47r
title: Occurrence Download

description: A dataset containing 101851 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hippoglossus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 101851 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009892-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5ab9x
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chasmocranus peruanus",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 13 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009952-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jkrnub
title: Occurrence Download

description: A dataset containing 3856 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is one of (United States of America, Canada, Mexico)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Continent derived from coordinates, Country derived from coordinates)",
 "OccurrenceStatus is Present",
 "TaxonKey is Acer saccharum"
 ]
}

 The dataset includes 3856 records from 169 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009950-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhyj64
title: Occurrence Download

description: A dataset containing 2678 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((170.37962 -45.45417,170.41562 -45.46553,170.42736 -45.47626,170.44184 -45.48596,170.45831 -45.49395,170.47635 -45.50004,170.49605 -45.50416,170.51626 -45.50604,170.54054 -45.50556,170.56232 -45.50274,170.58393 -45.49755,170.60494 -45.4894,170.62407 -45.47828,170.63954 -45.46551,170.65158 -45.45072,170.65944 -45.43458,170.66283 -45.4177,170.66187 -45.4018,170.65731 -45.38635,170.65152 -45.37438,170.64341 -45.36311,170.63314 -45.35274,170.6086 -45.33636,170.57333 -45.32245,170.56278 -45.31067,170.55118 -45.30109,170.51978 -45.28339,170.50122 -45.26117,170.48021 -45.24587,170.44876 -45.232,170.4224 -45.22521,170.38864 -45.22234,170.35706 -45.22512,170.32642 -45.23253,170.30535 -45.24026,170.28619 -45.25038,170.27032 -45.26236,170.25741 -45.27656,170.24802 -45.29316,170.24288 -45.31099,170.24241 -45.32774,170.24542 -45.34174,170.25078 -45.35392,170.26015 -45.36809,170.2711 -45.37988,170.2875 -45.39223,170.30606 -45.40184,170.31915 -45.41897,170.33575 -45.43284,170.3569 -45.44532,170.37962 -45.45417)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 2678 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009953-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24373/pdsp-293
title: Abatacept, Drug Exposure

description: This concept set contains codes pertaining to the medication abatacept. It was developed by authors of Denburg et. al., 2019 (DOI: 10.1681/ASN.2019040365), including Michelle Denburg (clinician), Hanieh Razzaghi (data scientist/informaticist) and Charles Bailey (clinician/informaticist). Please note: As this concept set was developed five years ago, it should be reviewed and updated prior to reuse in any further studies. Furthermore it is not at the Semantic Clinical Drug Form/Semantic Clinical Drug Group level so does not adhere to current best practices within PEDSnet.
description: This concept set was intended to identify Abatacept exposures among pediatric nephrology cohorts such as Glomerular Disease or Membranoproliferative Glomerulonephritis (MPGN).
description: This concept set was developed for the Membranoproliferative Glomerulonephritis (MPGN) in PEDSnet study.
DOI: 10.24373/pdsp-334
title: Azathioprine, Drug Exposure

description: Concept set intended to identify patients with an exposure to Azathioprine.
description: Membranoproliferative Glomerulonephritis (MPGN) in PEDSnet
DOI: 10.24373/pdsp-265
title: Ferritin, Lab Results

description: The concept set includes ferritin tests. The concept set was likely reviewed, though the clinician reviewer is unknown. It was initially developed for a RECOVER paper: ["Changes in Treatment and Severity of Multisystem Inflammatory Syndrome in Children: An EHR-based cohort study from the RECOVER program."](https://doi.org/10.1101/2022.10.19.22281256). The paper examines changes over the COVID era in abnormal laboratory measurements for patients diagnosed with MIS-C. The concept set is limited to LOINC codes.
description: A concept set indicating that a patient received a laboratory measurement for ferritin.
description: The codeset was also used for a Y1, Q4 RECOVER query examining clinical characteristics and healthcare utilization of PASC patients over time.
DOI: 10.24373/pdsp-133
title: Anxiety, PROMIS Measure

description: Two concept sets which inform one another to identify patient-reported anxiety. The first concept set, `promis_anxiety.csv` was developed to identify the questions that make up the Anxiety Patient Reported Outcome Measurement Information System (PROMIS) measure. These elements were identified by PCORnet as part of the CDM enhancement efforts for version 7.0. Self reported and parent proxy questions are identified in the concept set to aid in categorizing responses, especially in pediatric cohorts. Only this file in necessary to define a cohort of patients with a PROMIS measure for pain interference. The second concept set, `promis_anxiety_values.csv` was developed to identify the ANSWERS (i.e. `value_as_concept_id`) to the questions that make up the Anxiety Patient Reported Outcome Measurement Information System (PROMIS) measure. These elements were identified by PCORnet as part of the CDM enhancement efforts for version 7.0. They were identified by joining the concept set with the questions to the `concept_relationship` table and extracting `concept_id_2` where `relationship_id` = ‘Has Answer’.
description: Concept sets intended to identify the presence and responses to the PROMIS measure for anxiety.
description: These concept sets were developed in support of quarterly network data quality analysis of the PEDSnet database.
DOI: 10.24373/pdsp-267
title: Troponin, Lab Results

description: A concept set indicating that a patient received a laboratory measurement for troponin.
description: The Researching COVID to Enhance Recovery (RECOVER) Post-Acute Sequelae of SARS-CoV-2 (PASC) Electronic Health Record (EHR) Cohort Study
DOI: 10.24373/pdsp-78
title: Fluid and Electrolyte Disturbance

description: This concept set contains diagnoses related to fluid and electrolyte disorders. This codeset was developed by finding the concept_ids for a subset of the AHRQ CCSR clusters (https://hcup-us.ahrq.gov/toolssoftware/ccsr/dxccsr.jsp#overview) related to fluid and electrolyte disorders. This concept set alone was not reviewed by a clinician, but it was a component of a larger codeset that was reviewed by Chris Forrest. This concept set contains only ICD10 and ICD10CM codes. It does not contain versions of the concept_code with the decimal removed.
description: This concept set is inteded to identify patients with a diagnosis of fluid and electrolyte disturbance.
description: It was developed as part of systemic conditions for a RECOVER study manuscript exploring features of PASC in children.
DOI: 10.24373/pdsp-196
title: Pulmonary Eosinophilia

description: This concept set is one of a set which was created en masse to evaluate Asthma as part of a study. ICD-10 and ICD-10-CM codes were requested specifically by the study PI and mapped to SNOMED by the developer.
description: Concept set intended to map pulmonary eosinophilic diagnoses concepts between SNOMED and ICD codes.
description: This concept set was developed for the study "Neighborhood Greenspace as a Protective Factor Against Childhood Asthma."
DOI: 10.24373/pdsp-25
title: Physical Function, PROMIS Measure

description: Two concept sets which inform one another to identify patient reported physical function ability. This first concept set, `promis_physical_function.csv`, was developed to identify the questions that make up the Physical Function Patient Reported Outcome Measurement Information System (PROMIS) measure. These elements were identified by PCORnet as part of the CDM enhancement efforts for version 7.0. Self reported and parent proxy questions are identified in the concept set to aid in categorizing responses, especially in pediatric cohorts. Only this file is necessary to define a cohort of patients with a PROMIS measure for pain interference. The second concept set, `promis_physical_function_values.csv` was developed to identify the ANSWERS (i.e. `value_as_concept_id`) to the questions that make up the Physical Function Patient Reported Outcome Measurement Information System (PROMIS) measure. These elements were identified by PCORnet as part of the CDM enhancement efforts for version 7.0. They were identified by joining the concept set with the questions to the concept_relationship table and extracting `concept_id_2` where `relationship_id` = ‘Has Answer’.
description: Concept sets intended to identify the presence and responses to the PROMIS measure for physical function.
description: This concept set was developed in support of quarterly network data quality analysis of the PEDSnet database.
DOI: 10.24373/pdsp-124
title: Pediatric Medical Complexity Algorithm Diagnoses

description: A comprehensive concept set of PMCA conditions, namely chronic diseases.
description: This concept set was developed to be used with the pediatric medical complexity algorithm function.
DOI: 10.24373/pdsp-44
title: Neurogenic Bladder

description: This concept set is inteded to identify patients with a diagnosis of neurogenic bladder.
description: Health Services and Clinical Characteristics that Precede Diagnosis of Primary Hyperoxaluria Type 1 (Alnylam)
DOI: 10.24373/pdsp-228
title: Hunger Vital Signs Responses

description: This concept set was developed for the PEDSnet Network Data Quality program to help identify cases where a non-valueset concept was present in the data.
description: This concept set reflects the controlled valueset for value_as_concept_id in the observation table for instances where observation_concept_id = 37116643, 40192426, or 40192517 (Hunger Vital Signs).
DOI: 10.24373/pdsp-301
title: Adalimumab, Drug Exposure

description: Concept set intended to identify patients with an Adalumumab exposure.
description: Biologic Abatement and Capturing Kids' Outcomes and Flare Frequency in Juvenile Spondyloarthritis ('BACK-OFF JSpA')
DOI: 10.24373/pdsp-90
title: Kidney Transplant

description: This concept set includes all diagnoses related to kidney transplants or related complications. The code list was generated by searching for all mentions of 'kidney' or 'renal' with 'transplant' in the concept_name. This broad concept set was intended to identify patients with kidney transplant diagnoses to define a study cohort. It is limited to ICD9CM, ICD10, ICD10CM, and SNOMED diagnosis codes. It excludes concept codes for radiology-associated terms, 'donor of' terms, or pathology-related. ICD codes are included with and without decimal points, indicated by cc_decimal_removal. Note: To be as sensitive as possible, use procedure codes for kidney transplants as well.
description: This concept set is intended to identify patients with a kidney transplant diagnosis code.
description: Preserving Kidney Function in Children with Chronic Kidney Disease (PRESERVE)
DOI: 10.24373/pdsp-50
title: Urticaria

description: This concept set is one of a set which was created en masse to evaluate Asthma as part of a study. ICD-10 and ICD-10-CM codes were requested specifically by the study PI and mapped to SNOMED by the developer.
description: Concept set intended to map uticaria diagnoses concepts between SNOMED and ICD codes.
description: This concept set was developed for the study "Neighborhood Greenspace as a Protective Factor Against Childhood Asthma."
DOI: 10.24373/pdsp-231
title: Health Literacy, SDOH Measure

description: This concept set was developed to identify the questions that make up the Social Determinants of Health (SDOH) metrics for health literacy. These includes the Single Item Literacy Screener. These elements were identified by PCORnet as part of the CDM enhancement efforts for version 7.0.
description: This concept set is intended to identify the SDOH measure(s) for health literacy.
DOI: 10.24373/pdsp-159
title: Abdominal Pain

description: This concept set is inteded to identify patients with a diagnosis of abdominal pain.
description: The Researching COVID to Enhance Recovery (RECOVER) Post-Acute Sequelae of SARS-CoV-2 (PASC) Electronic Health Record (EHR) Cohort Study
DOI: 10.24373/pdsp-232
title: Food Insecurity SDOH Measure Responses

description: This concept set was developed to identify the ANSWERS to the questions that make up the Social Determinants of Health (SDOH) metrics for food insecurity. These include the U.S. Food Security Survey. These elements were identified by PCORnet as part of the CDM enhancement efforts for version 7.0. They were identified by joining the concept set with the questions to the concept_relationship table and extracting concept_id_2 where relationship_id = 'Has Answer'.
description: This concept set is intended to identify the responses to the food insecurity SDOH measure(s).
DOI: 10.24373/pdsp-282
title: Influenza, Lab Results

description: This concept set was used in conjunction with a flu diagnosis concept set and source value string searching to identify patients with evidence of flu for a subcohort in the analysis.
description: A concept set indicating that a patient received a laboratory test for influenza.
DOI: 10.24373/pdsp-47
title: Chronic Diabetes

description: This concept set was developed via string searches of the PEDSnet extension of the OMOP vocabulary concept table, with domain was restricted to Condition. Codes were limited to SNOMED, ICD-10-CM, and ICD-9-CM vocabularies.
description: Concept set intended to identify patients with a diagnosis of Chronic Diabetes to define a study cohort.
description: Developed for the "Preserving Kidney Function in Children with Chronic Kidney Disease (PRESERVE)" study to identify patients with chronic diabetes.
DOI: 10.24373/pdsp-64
title: Leukemia and Lymphoma

description: This concept set is inteded to identify patients with a diagnosis of leukemia and lymphoma.
description: This concpet set was developed as part of a PEDSnet Infrastructure project.
DOI: 10.24373/pdsp-238
title: Utilities SDOH Measure Responses

description: This concept set was developed to identify the ANSWERS to the questions that make up the Social Determinants of Health (SDOH) metrics for utilities. These include the AHC HRSN Utilities. These elements were identified by PCORnet as part of the CDM enhancement efforts for version 7.0. They were identified by joining the concept set with the questions to the concept_relationship table and extracting concept_id_2 where relationship_id = 'Has Answer'.
description: This concept set is intended to identify the responses to the utilities SDOH measure(s).
DOI: 10.24373/pdsp-341
title: Blood Pressure, Measurement

description: This concept set includes methods of BP measurement. This concept set was generated by searching for all mentions of 'blood pressure' and 'measure,' or 'auscultation' was created for the PRESERVE study and includes methods of BP measurement. Codes were restricted to the ICD9Proc, ICD10PCS, CPT4, HCPCS, SNOMED and LOINC vocabularies. It does not include ambulatory BP monitoring devices (portable BP machines for 24-hour monitoring).
description: Concept set intended to identify patients with values for a blood pressure measurement.
description: Preserving Kidney Function in Children with Chronic Kidney Disease (PRESERVE)
DOI: 10.24373/pdsp-257
title: Blood Culture, Lab Results

description: This concept set contains codes for blood culture lab tests. It was developed for the PRoMPT BOLUS study to help identify patients with sepsis. It was used in conjunction with the blood culture procedures concept set, IV fluid exposure, and broad spectrum antibiotic exposure for patients with an ED visit that led to an inpatient administration.
description: A concept set indicating that a patient received a laboratory blood culture.
DOI: 10.24373/pdsp-87
title: Major Depressive Disorder

description: This concept set is inteded to identify patients with a diagnosis of major depressive disorder.
description: Developing Computable Phenotype for Autism
DOI: 10.24373/pdsp-393
title: Hematology, Facility

description: This concept set contains codes intended to identify hematology or hematology/oncology visits (in combination with the hematology provider concept set). This concept set was generated by restricting the PCORnet CDM valueset to facility types that mention "hematology". This value set is PCORnet-specific and is based on PCORnet CDM v6.0 2021-04. It has some overlap with the Oncology, Facility concept set.
description: Concept set intended to assess the frequency with which patients sought care with specialties involved in patient care for and related to hematology.
description: This concept set was developed for the Preserving Kidney Function in Children with Chronic Kidney Disease (PRESERVE) study. Hematology/oncology visits are a covariate of interest across the PRESERVE study because treatments for malignancies may be associated with kidney function decline.
DOI: 10.24373/pdsp-214
title: Dermotological Conditions

description: Collection of diagnoses used to identify patients seen for dermatological conditions.