cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.12805235
title: Beyond gene flow: (non)-parallelism of secondary contact in a pair of highly differentiated sibling species

description: Replicated secondary contact zones can provide insights on the barriers to gene flow that are important during speciation and can reveal to which degree secondary contact may result in similar evolutionary outcomes. Here, we studied two secondary contact zones between highly differentiated Alpine butterflies of the genus Erebia using whole-genome re-sequencing data. We assessed the genomic relationships between populations and species and find hybridization to be rare, with no to little current or historical introgression in either contact zone. There are large similarities between the contact zones, consistent with an allopatric origin of interspecific differentiation, with no indications for ongoing reinforcing selection. Consistent with expected reduced effective population size, we further find that scaffolds related to the Z-chromosome show increased differentiation compared to the already high levels across the entire genome, which could also hint towards a contribution of the Z chromosome to species divergence in this system. Finally, we detected the presence of the endosymbiont Wolbachia, which can cause reproductive isolation between its hosts, in all E. cassioides, while it appears to be fully or largely absent in contact zone populations of E. tyndarus. We discuss how this rare pattern may have arisen and how it may have affected the dynamics of speciation upon secondary contact.
DOI: 10.5518/750
title: Data supporting the publication 'Emulsion Microgel Particles as High-Performance Bio-Lubricants'

description: Excel sheet providing the data from all figures in the associated paper.
DOI: 10.15468/dl.cmndkw
title: Occurrence Download

description: A dataset containing 238 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is FBIP: Linking ecosystem processes and soil microbial diversity in Rooibos and Honeybush"
 ]
}

 The dataset includes 238 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034705-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12802219
title: Model of the Earth's conductance for the upper 22 km

description: Model of the Earth's conductance for the upper 22 km obtained by compilation of the models from 1) Grayver, 2021 (https://doi.org/10.1029/2021GC009950) for the conductance of ocean and sediments; 2) global conductivity model from Alekseev et al. 2015 (https://doi.org/10.1186/s40623-015-0272-5); 3) recent 3-D conductivity model of the USA from Munch & Grayver, 2023 ( https://doi.org/10.1016/j.epsl.2022.117939 ).

The global conductance distribution (dataset "Conductance") is provied at 6 arc-min (0.1 degree) resolution in geocentric (i.e. spherical) coordinate system in the centres of the corresponding cells. Datasets "theta_c" and "phi_c" stand for co-latitudes  and longitudes of the cells' centres correspondingly.
DOI: 10.5281/zenodo.12802220
title: Model of the Earth's conductance for the upper 22 km

description: Model of the Earth's conductance for the upper 22 km obtained by compilation of the models from 1) Grayver, 2021 (https://doi.org/10.1029/2021GC009950) for the conductance of ocean and sediments; 2) global conductivity model from Alekseev et al. 2015 (https://doi.org/10.1186/s40623-015-0272-5); 3) recent 3-D conductivity model of the USA from Munch & Grayver, 2023 ( https://doi.org/10.1016/j.epsl.2022.117939 ).

The global conductance distribution (dataset "Conductance") is provied at 6 arc-min (0.1 degree) resolution in geocentric (i.e. spherical) coordinate system in the centres of the corresponding cells. Datasets "theta_c" and "phi_c" stand for co-latitudes  and longitudes of the cells' centres correspondingly.
DOI: 10.5281/zenodo.12802447
title: Weights for calculation of magnetic field at INTERMAGNET observatories for 3-D conductivity model of the Earth in the time domain

description: Weights are calculated with time step of 1 hour and memory of 4320 hours for two cases.



The source is parametrized by spherical harmonics up to degree 4 (MB_SHS_modes_up_to_24_at_obs.h5 )

The source is parametrized by so-called periodic modes, obtained from the output of TIEGCM (MB_periodic_modes_16_24_at_obs.h5)


The detailed desciption of the weights meaning and calculation can be found in Kruglyakov & Kuvshinov, 2024.



Datasets M_B_r stand for radial (upward) component of the magnetic field at the ground;

Datasets M_B_theta stand for southward component of the magnetic field at the ground;

Datasets M_B_phi stand for eastward component of the magnetic field at the ground;

Datasets Theta stand for the co-latitudes of the observatories in the geo-centric cooridnate system

Datasets Phi stand for the longitudes of the observatories in the geo-centric cooridnate system
DOI: 10.5281/zenodo.12802448
title: Weights for calculation of magnetic field at INTERMAGNET observatories for 3-D conductivity model of the Earth in the time domain

description: Weights are calculated with time step of 1 hour and memory of 4320 hours for two cases.



The source is parametrized by spherical harmonics up to degree 4 (MB_SHS_modes_up_to_24_at_obs.h5 )

The source is parametrized by so-called periodic modes, obtained from the output of TIEGCM (MB_periodic_modes_16_24_at_obs.h5)


The detailed desciption of the weights meaning and calculation can be found in Kruglyakov & Kuvshinov, 2024.



Datasets M_B_r stand for radial (upward) component of the magnetic field at the ground;

Datasets M_B_theta stand for southward component of the magnetic field at the ground;

Datasets M_B_phi stand for eastward component of the magnetic field at the ground;

Datasets Theta stand for the co-latitudes of the observatories in the geo-centric cooridnate system

Datasets Phi stand for the longitudes of the observatories in the geo-centric cooridnate system
DOI: 10.15468/dl.eszcnw
title: Occurrence Download

description: A dataset containing 692 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chinese Taipei",
 "TaxonKey is Lithocarpus konishii (Hayata) Hayata"
 ]
}

 The dataset includes 692 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034707-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jfc3z6
title: Occurrence Download

description: A dataset listing the 379 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Gabon",
 "DatasetKey is FishBase Database",
 "Geometry POLYGON((9.44471 0.93896,8.12776 0.74284,7.56736 -1.91869,7.14706 -4.52023,9.22055 -4.85534,11.15394 -3.93341,9.61283 -2.53467,8.66014 -1.02235,9.05243 0.01434,9.44471 0.93896))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 379 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034704-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k8htqc
title: Occurrence Download

description: A dataset containing 9672 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-78.89186 1.84789,-81.28741 -0.54734,-81.43713 -4.43567,-79.04158 -5.18164,-77.61922 -3.83835,-75.44825 -2.71729,-75.29853 -0.09818,-78.89186 1.84789))",
 "HasGeospatialIssue is false",
 "TaxonKey is Apidae"
 ]
}

 The dataset includes 9672 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034709-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.27vxpg23
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (358 records)
DOI: 10.15468/dl.ccrxax
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is one of (China, Chinese Taipei, Hong Kong, Macao)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phytolacca polyandra Batalin",
 "Year 1950-2024"
 ]
}

 The dataset includes 71 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034712-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.20387/bonares-ss02-6dys
title: Soil texture spatial rasters | Agricultural Soil-landscape of Germany

description: The dataset comprises spatial rasters of the sand, silt and clay content throughout Germany (agricultural soils) from 0 to 100 cm depth. It has a raster resolution of 100 m and comprises depth slices of 1 cm. It was generated by machine learning with a convolutional neural network model. The performance was evaluated with a median RMSE of 17.8% for the sand, 14.4% for the silt, and 9.3% for the clay content in the top ten centimeters. At a depth of 40 cm, this rose to 20.9, 16.5, and 11.8% respectively.
All methodological details are provided in: Ließ, M. and Sakhaee, A. (2024). Deep Learning with a Multi-Task Convolutional Neural Network to Generate a National-Scale 3D Soil Data Product: The Particle Size Distribution of the German Agricultural Soil Landscape. Agriculture, 14, x. https://doi.org/ 10.3390/xxxxx

Research domain: Soil Sciences

Research question: None

The R script is also included as supplemental  information in the metadata
DOI: 10.34740/kaggle/dsv/9024978
title: e-IPO Data - Investment
DOI: 10.20394/t1adlw71
title: Glasgow Origin-Destination (OD) Matrices

description: Origin-Destination (OD) Matrices that provide information about number of trips between different origins and destinations in the Glasgow City Region.
E
Location data from mobile phone apps aggregated by Huq Industries was used to derive OD Matrices.

Calculating OD Matrices from the mobile phone app data involved the following steps:

* Filtering out inaccurate and imprecise GPS points.
* Estimating stay locations using time and distance thresholds. A stay location is detected if a user spent at least 5 minutes in a 500m radius area.
* Extraction of trips between stay locations.
* Associating each detected stay location with an Intermediate Zone (IZ) in the Glasgow City Region.
* Applying weights based on the user’s home location Intermediate Zone and their activity status in the dataset.
* Aggregating the number of trips between each origin-destination pair.


Additional Information: 
To validate the methodology, the output OD product was compared with the OD matrix derived from the Scottish Household Survey. This comparison, based on the percentage of trips between local authorities in the Glasgow City Region, demonstrated a high correlation score (0.99) and a low mean squared error (0.0011).

##Access and Restrictions##
Glasgow Origin-Destination (OD) Matrices is currently available externally for non-commercial academic research. The data is available to request as Safeguarded data under UBDC's End User Licence.
DOI: 10.15468/dl.9tjez7
title: Occurrence Download

description: A dataset containing 82073 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Calonectris diomedea (Scopoli, 1769)",
 "Year 1901-2024"
 ]
}

 The dataset includes 82073 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034713-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5518/603
title: A comprehensive survey of the nutrient content of yogurt products in the UK's five major online supermarkets in November 2016

description: Back of pack information for 921 yogurt products available in the UK in November 2016.
DOI: 10.15468/dl.payu97
title: Occurrence Download

description: A dataset containing 2326343 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Kenya",
 "OccurrenceStatus is Present",
 "Year 2018-2024"
 ]
}

 The dataset includes 2326343 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034706-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5f8wgw
title: Occurrence Download

description: A dataset containing 3149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Arvicola sapidus Miller, 1908",
 "Year 1901-2024"
 ]
}

 The dataset includes 3149 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034714-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.msy44c
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Lithocarpus konishii (Hayata) Hayata"
 ]
}

 The dataset includes 37 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034715-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60893/figshare.apl.26197010
title: Supplementary Data File

description: Supplementary Data File
DOI: 10.60893/figshare.apl.26197010.v1
title: Supplementary Data File

description: Supplementary Data File
DOI: 10.60893/figshare.apl.26300689
title: Supplementary Information: Revisiting thermal transport in CuInTe2: Role of temperature-dependent anharmonicity and higher-order phonon-phonon interactions

description: Supplementary Material
DOI: 10.60893/figshare.apl.26300689.v1
title: Supplementary Information: Revisiting thermal transport in CuInTe2: Role of temperature-dependent anharmonicity and higher-order phonon-phonon interactions

description: Supplementary Material
DOI: 10.15468/dl.99jyjh
title: Occurrence Download

description: A dataset containing 367166 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Ciconia ciconia (Linnaeus, 1758)",
 "Year 1901-2024"
 ]
}

 The dataset includes 367166 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034710-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzdbkc
title: Occurrence Download

description: A dataset containing 120968 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Spinus spinus (Linnaeus, 1758)",
 "Year 1901-2024"
 ]
}

 The dataset includes 120968 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034711-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9q86gp
title: Occurrence Download

description: A dataset containing 321 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is one of (China, Hong Kong, Macao, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phytolacca japonica Makino",
 "Year 1948-2024"
 ]
}

 The dataset includes 321 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034717-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zzgenc
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Hong Kong",
 "TaxonKey is Lithocarpus konishii (Hayata) Hayata"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034718-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2478r2
title: Occurrence Download

description: A dataset listing the 313 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-78.89186 1.84789,-81.28741 -0.54734,-81.43713 -4.43567,-79.04158 -5.18164,-77.61922 -3.83835,-75.44825 -2.71729,-75.29853 -0.09818,-78.89186 1.84789))",
 "HasGeospatialIssue is false",
 "TaxonKey is Apidae"
 ]
}

 The dataset's 313 records were derived from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034708-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12805835
title: Modelling Amorphization and Dissolution of Zr(Fe,Cr)2 Secondary Phase Precipitates in Zircaloys

description: Data and accompanying paper "Modelling Amorphization and Dissolution of Zr(Fe,Cr)2 Secondary Phase Precipitates in Zircaloys" J. D. Robson, Journal of Nuclear Materials
DOI: 10.5281/zenodo.12805836
title: Modelling Amorphization and Dissolution of Zr(Fe,Cr)2 Secondary Phase Precipitates in Zircaloys

description: Data and accompanying paper "Modelling Amorphization and Dissolution of Zr(Fe,Cr)2 Secondary Phase Precipitates in Zircaloys" J. D. Robson, Journal of Nuclear Materials
DOI: 10.60893/figshare.jap.26083450
title: Supplementary material

description: Additions to intermediate results as requested by the reviewers, such as impedance result and S-parameters
DOI: 10.60893/figshare.jap.26083450.v1
title: Supplementary material

description: Additions to intermediate results as requested by the reviewers, such as impedance result and S-parameters
DOI: 10.60893/figshare.jcp.26240384
title: Supplementary information

description: 1 Disentangling temperature and droplet size effects
2 Aimless shooting additional figures
3 Influence of ad hoc parameters
DOI: 10.60893/figshare.jcp.26240384.v1
title: Supplementary information

description: 1 Disentangling temperature and droplet size effects
2 Aimless shooting additional figures
3 Influence of ad hoc parameters
DOI: 10.60893/figshare.jcp.26133235
title: Supplementary Online Material

description: Supplementary Material
DOI: 10.60893/figshare.jcp.26133235.v1
title: Supplementary Online Material

description: Supplementary Material
DOI: 10.6084/m9.figshare.26363452
title: Oosthuizen et al. Data.pdf

description: Multimammate mice from the genus <i>Mastomys</i> are the most widespread rodent complex in Africa. They are prolific breeders, occurring at high densities, can cause significant agricultural damage, and are reservoir hosts for a number of pathogens that can be transmitted to humans. Multimammate mice are nocturnal and given their success in urbanised environments, we were interested in how they would respond to increasingly bright anthropogenic spaces. We evaluated the locomotor activity of wild-caught southern multimammate mice (<i>Mastomys coucha</i>), under four treatments: in an outdoor enclosure with natural light and temperature fluctuations, in a laboratory under a standard 12h Light:12h Dark light regime, and two artificial light at night (ALAN) regimes (2 Lux) of varying proximity to the experimental animal cages. The study animals remained nocturnal for the duration of the experiments. They were more active under the laboratory conditions compared to the outdoor treatment. The mice reduced their activity under ALAN. When the night light originated remotely from a corner of the room, activity levels decreased by more than 50%, whereas under direct ALAN from above the cages, there was a 75% decrease in activity. The onset of activity was later during the two LAN treatments and resulted in increased activity during the light phase of the day. We concluded that <i>Mastomys coucha </i>is strongly averse to light and show severe behavioural and circadian responses to light at night. We predict that it is unlikely that <i>Mastomys</i> will flourish in cities, but that they could thrive in and around dark urbanised refugia with access to abundant food.
DOI: 10.6084/m9.figshare.26363452.v1
title: Oosthuizen et al. Data.pdf

description: Multimammate mice from the genus <i>Mastomys</i> are the most widespread rodent complex in Africa. They are prolific breeders, occurring at high densities, can cause significant agricultural damage, and are reservoir hosts for a number of pathogens that can be transmitted to humans. Multimammate mice are nocturnal and given their success in urbanised environments, we were interested in how they would respond to increasingly bright anthropogenic spaces. We evaluated the locomotor activity of wild-caught southern multimammate mice (<i>Mastomys coucha</i>), under four treatments: in an outdoor enclosure with natural light and temperature fluctuations, in a laboratory under a standard 12h Light:12h Dark light regime, and two artificial light at night (ALAN) regimes (2 Lux) of varying proximity to the experimental animal cages. The study animals remained nocturnal for the duration of the experiments. They were more active under the laboratory conditions compared to the outdoor treatment. The mice reduced their activity under ALAN. When the night light originated remotely from a corner of the room, activity levels decreased by more than 50%, whereas under direct ALAN from above the cages, there was a 75% decrease in activity. The onset of activity was later during the two LAN treatments and resulted in increased activity during the light phase of the day. We concluded that <i>Mastomys coucha </i>is strongly averse to light and show severe behavioural and circadian responses to light at night. We predict that it is unlikely that <i>Mastomys</i> will flourish in cities, but that they could thrive in and around dark urbanised refugia with access to abundant food.
DOI: 10.15468/dl.mkwaen
title: Occurrence Download

description: A dataset containing 437 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lepisorus buergerianus (Miq.) C.F.Zhao, R.Wei & X.C.Zhang"
 ]
}

 The dataset includes 437 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034719-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s758nk
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meiacanthus smithi Klausewitz, 1962"
 ]
}

 The dataset includes 154 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034720-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rb6mz3
title: Occurrence Download

description: A dataset containing 297 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Canada",
 "Country is Canada"
 ]
 },
 "TaxonKey is one of (Dysphania botrys (L.) Mosyakin & Clemants)"
 ]
}

 The dataset includes 297 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034721-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.