cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.35077/act-say
title: Neuron Morphology data in tiff stack format from Patch-seq experiments in human neocortex, Cell ID 835674226

description: Human neocortical neurons display diverse morphology, physiology and gene expression profiles. We use a method called Patch-seq, where these three data modalities are assayed simultaneously from the same neuron, to understand how the genetic profile of human neocortical neuron types corresponds to their morphological and electrophysiological phenotypes. This collection may contain image stacks (TIFF), reconstruction files in image space (.swc, µm), a transformed file (.swc, µm) oriented so that the y axis extends vertically towards the pia surface, and a marker file (.marker, µm) indicating nodes where dendrites were truncated (10), reconstruction was not continued (20), or surface of tissue was closest to soma (30).
description: https://www.protocols.io/view/patch-seq-recording-and-extraction-detailed-protoc-5qpvoyb2bg4o/v2, https://www.protocols.io/view/3d-reconstruction-of-neurons-in-vaa3d-v-3-36wgq5683gk5/v3
description: DATASET METADATA: title:'Neuron Morphology data in tiff stack format from Patch-seq experiments in human neocortex, Cell ID 835674226', GeneralModality:'cell morphology', Technique:'Patch-seq' SPECIMEN METADATA: LocalID:'H19.03.306', Species:'Human', NCBITaxonomy:'NCBI:txid9606', Age:'21', Ageunit:'years', Sex:'Female', OrganName:'Brain', SampleLocalID:'835674226', Atlas:'Ding, Song-Lin et al. “Comprehensive cellular-resolution atlas of the adult human brain.” The Journal of comparative neurology vol. 524,16 (2016): 3127-481. doi:10.1002/cne.24354', Locations:'ITG' INSTRUMENT METADATA: MicroscopeType:'Brightfield', MicroscopeManufacturerAndModel:'Zeiss AxioImager Z2 microscope', ObjectiveImmersion:'Oil' IMAGE METADATA: xAxis:'NA', yAxis:'NA', zAxis:'NA', Number:'NA', displayColor:'NA', stepSizeX:'0.114', stepSizeY:'0.114', stepSizeZ:'0.44'
DOI: 10.35077/act-set
title: Neuron Morphology data in tiff stack format from Patch-seq experiments in human neocortex, Cell ID 839239569

description: Human neocortical neurons display diverse morphology, physiology and gene expression profiles. We use a method called Patch-seq, where these three data modalities are assayed simultaneously from the same neuron, to understand how the genetic profile of human neocortical neuron types corresponds to their morphological and electrophysiological phenotypes. This collection may contain image stacks (TIFF), reconstruction files in image space (.swc, µm), a transformed file (.swc, µm) oriented so that the y axis extends vertically towards the pia surface, and a marker file (.marker, µm) indicating nodes where dendrites were truncated (10), reconstruction was not continued (20), or surface of tissue was closest to soma (30).
description: https://www.protocols.io/view/patch-seq-recording-and-extraction-detailed-protoc-5qpvoyb2bg4o/v2, https://www.protocols.io/view/3d-reconstruction-of-neurons-in-vaa3d-v-3-36wgq5683gk5/v3
description: DATASET METADATA: title:'Neuron Morphology data in tiff stack format from Patch-seq experiments in human neocortex, Cell ID 839239569', GeneralModality:'cell morphology', Technique:'Patch-seq' SPECIMEN METADATA: LocalID:'H19.03.306', Species:'Human', NCBITaxonomy:'NCBI:txid9606', Age:'21', Ageunit:'years', Sex:'Female', Genotype:'culture, enhancer AAV', OrganName:'Brain', SampleLocalID:'839239569', Atlas:'Ding, Song-Lin et al. “Comprehensive cellular-resolution atlas of the adult human brain.” The Journal of comparative neurology vol. 524,16 (2016): 3127-481. doi:10.1002/cne.24290', Locations:'ITG' INSTRUMENT METADATA: MicroscopeType:'Brightfield', MicroscopeManufacturerAndModel:'Zeiss AxioImager Z2 microscope', ObjectiveImmersion:'Oil' IMAGE METADATA: xAxis:'NA', yAxis:'NA', zAxis:'NA', Number:'NA', displayColor:'NA', stepSizeX:'0.114', stepSizeY:'0.114', stepSizeZ:'0.44'
DOI: 10.35077/act-shy
title: Neuron Morphology data in tiff stack format from Patch-seq experiments in human neocortex, Cell ID 848565246

description: Human neocortical neurons display diverse morphology, physiology and gene expression profiles. We use a method called Patch-seq, where these three data modalities are assayed simultaneously from the same neuron, to understand how the genetic profile of human neocortical neuron types corresponds to their morphological and electrophysiological phenotypes. This collection may contain image stacks (TIFF), reconstruction files in image space (.swc, µm), a transformed file (.swc, µm) oriented so that the y axis extends vertically towards the pia surface, and a marker file (.marker, µm) indicating nodes where dendrites were truncated (10), reconstruction was not continued (20), or surface of tissue was closest to soma (30).
description: https://www.protocols.io/view/patch-seq-recording-and-extraction-detailed-protoc-5qpvoyb2bg4o/v2, https://www.protocols.io/view/3d-reconstruction-of-neurons-in-vaa3d-v-3-36wgq5683gk5/v3
description: DATASET METADATA: title:'Neuron Morphology data in tiff stack format from Patch-seq experiments in human neocortex, Cell ID 848565246', GeneralModality:'cell morphology', Technique:'Patch-seq' SPECIMEN METADATA: LocalID:'H19.06.352', Species:'Human', NCBITaxonomy:'NCBI:txid9606', Age:'26', Ageunit:'years', Sex:'Male', Genotype:'culture, enhancer AAV', OrganName:'Brain', SampleLocalID:'848565246', Atlas:'Ding, Song-Lin et al. “Comprehensive cellular-resolution atlas of the adult human brain.” The Journal of comparative neurology vol. 524,16 (2016): 3127-481. doi:10.1002/cne.24214', Locations:'MTG' INSTRUMENT METADATA: MicroscopeType:'Brightfield', MicroscopeManufacturerAndModel:'Zeiss AxioImager Z2 microscope', ObjectiveImmersion:'Oil' IMAGE METADATA: xAxis:'NA', yAxis:'NA', zAxis:'NA', Number:'NA', displayColor:'NA', stepSizeX:'0.114', stepSizeY:'0.114', stepSizeZ:'0.44'
DOI: 10.6084/m9.figshare.22674028
title: Thesis Supplementary Data for Chapter 4

description: These supplementary data files for Chapter 4 of my PhD dissertation. <br> Supplementary Data 1: GO term enrichments for genetic interactors of YBR196C-A Supplementary Data 2: GO term enrichments for GI PSN interactors of YBR196C-A Supplementary Data 3: GO term enrichments (using GSEA) for coexpression network of YBR196C-A
DOI: 10.6084/m9.figshare.22674028.v1
title: Thesis Supplementary Data for Chapter 4

description: These supplementary data files for Chapter 4 of my PhD dissertation. <br> Supplementary Data 1: GO term enrichments for genetic interactors of YBR196C-A Supplementary Data 2: GO term enrichments for GI PSN interactors of YBR196C-A Supplementary Data 3: GO term enrichments (using GSEA) for coexpression network of YBR196C-A
DOI: 10.25318/4210004701-eng
title: Child care businesses by service type, Ontario, 2022

description: Count of centre-based, licensed home-based and unlicensed home-based child care business by type in Ontario.
DOI: 10.5281/zenodo.7856301
title: Microbiome, mixotrophic algae, zooplankton, and fish amino acid and phospholipid fatty acid content in terrestrial and plastic carbon treatments

description: Data includes amino acid (µg AA mg DW<sup>-1</sup>) and phospholipid fatty acid content (µg FA mg DW<sup>-1</sup>) of the microbiome, mixotrophic algae, zooplankton, and fish<em> </em>from the four-trophic level experiment. The experiment included control (no addition), 13.5% <sup>13</sup>C-labelled beech leaves (<em>Fagus sylvatica</em>), 97% <sup>13</sup>C-labelled lignin-hemicellulose extracted from wheat (<em>Triticum aestivum</em>, ~80% lignin, 13% hemicellulose), and 99% <sup>13</sup>C-labelled polystyrene (microplastic). Incubation time in humic lake water was 14 days in the control, leaf, and lignin experiment but 56 days for polystyrene, which after mixotrophic algae (<em>Cryptomonas </em>sp.) was introduced to the bottles. In the next step, herbivorous zooplankton (<em>Daphnia magna</em>) consumed microbes, mixotrophic algae, and particles for five days which after they were used as the diet to zebrafish (<em>Danio rerio</em>) during a five-day experiment.
description: This data has been used for a paper in Ecology Letters titled "The second life of terrestrial and plastic carbon as nutritionally valuable food for aquatic consumers".
DOI: 10.5281/zenodo.7856300
title: Microbiome, mixotrophic algae, zooplankton, and fish amino acid and phospholipid fatty acid content in terrestrial and plastic carbon treatments

description: Data includes amino acid (µg AA mg DW<sup>-1</sup>) and phospholipid fatty acid content (µg FA mg DW<sup>-1</sup>) of the microbiome, mixotrophic algae, zooplankton, and fish<em> </em>from the four-trophic level experiment. The experiment included control (no addition), 13.5% <sup>13</sup>C-labelled beech leaves (<em>Fagus sylvatica</em>), 97% <sup>13</sup>C-labelled lignin-hemicellulose extracted from wheat (<em>Triticum aestivum</em>, ~80% lignin, 13% hemicellulose), and 99% <sup>13</sup>C-labelled polystyrene (microplastic). Incubation time in humic lake water was 14 days in the control, leaf, and lignin experiment but 56 days for polystyrene, which after mixotrophic algae (<em>Cryptomonas </em>sp.) was introduced to the bottles. In the next step, herbivorous zooplankton (<em>Daphnia magna</em>) consumed microbes, mixotrophic algae, and particles for five days which after they were used as the diet to zebrafish (<em>Danio rerio</em>) during a five-day experiment.
description: This data has been used for a paper in Ecology Letters titled "The second life of terrestrial and plastic carbon as nutritionally valuable food for aquatic consumers".
DOI: 10.25318/4210004701-fra
title: Entreprises de garde d’enfants, par type de service, Ontario, 2022

description: Nombre d’entreprises de services de garde en centre, en milieu familial avec permis et en milieu familial sans permis en Ontario.
DOI: 10.25318/4210004801-eng
title: Child care businesses by service type, Manitoba, 2022

description: Count of centre-based, licensed home-based and unlicensed home-based child care business by type in Manitoba.
DOI: 10.25345/c5n873890
title: MassIVE MSV000091786 - Novel perfluoroalkyl substances (PFAS) discovered in whole blood using automated non-targeted analysis of dried blood spots
title: This Dataset goes alongside the 2023 manuscript: Novel perfluoroalkyl substances (PFAS) discovered in whole blood using automated non-targeted analysis of dried blood spots by Jeremy P. Koelmel, Elizabeth Z. Lin, Emily Parry, Paul Stelben, Emma E.Rennie, Krystal J.Godri Pollitt A small subset of per- and polyfluoroalkyl substances (PFAS) are routinely screened in human blood. These compounds generally explain &lt;50 percent of the total PFAS in human blood. The percentage of known PFAS in human blood has been decreasing as replacement PFAS and more complex PFAS chemistries are introduced to the market. Most of these novel PFAS have not been previous identified. Non-targeted methods are required to characterize this dark matter PFAS. Our objective was to apply non-targeted PFAS analysis to human blood to gain an understanding about the sources, concentrations, and toxicity of these compounds. A high-resolution tandem mass spectrometry (HRMS) and software workflow for PFAS characterization in dried blood spots is reported. Dried blood spots are a less invasive collection technique compared to venous blood draws, allowing collection from vulnerable populations. Biorepositories of archived dried blood spots are available internationally from newborns and present opportunities to study prenatal exposure to PFAS. In this study, dried blood spot cards were analyzed using iterative MS/MS by liquid chromatography HRMS. Data processing was conducted using FluoroMatch Suite including a visualizer tool that presents homologous series, retention time vs m/z plots, MS/MS spectra, feature tables, annotations, and fragments for fragment screening. The researcher performing data-processing and annotation was blinded to the fact that standards were spiked in, and was able to annotated 95 percent of standards spiked on dried blood spot samples, signifying a low false negative rate using FluoroMatch Suite. A total of 28 PFAS (20 standards and 4 exogenous compounds) were detected across five homologous series with Schymanski Level 2 confidence. Of these four, 3 were perfluoroalkyl ether carboxylic acids (PFECA), a chemical class of PFAS which is increasingly being detected in environmental and biological matrices but is not currently screened in most targeted analyses. A further 86 potential PFAS were detected using fragment screening. PFAS are extremely persistent and widespread yet remain largely unregulated. Our findings will contribute to an improved an understanding of exposures. Application of these methods in environmental epidemiology studies have the potential to inform policy with regards to PFAS monitoring, regulation, and individual-level mitigation strategies.
DOI: 10.25318/4210004801-fra
title: Entreprises de garde d’enfants, par type de service, Manitoba, 2022

description: Nombre d’entreprises de services de garde en centre, en milieu familial avec permis et en milieu familial sans permis au Manitoba.
DOI: 10.6084/m9.figshare.22277233.v1
title: Designing E-textiles for fall and near-fall detection using a human centred design approach

description: <strong>Underlying data for the thesis chapter 4 'Designing E-textiles for fall and near-fall detection using a human centred design approach in the thesis titled Electronic textile garments for fall and near fall detection by Zahra Rahemtulla</strong> <strong>and for the paper 'Using a human centred design approach for the development of electronic textiles for older adults'.</strong> <br> <br> The study was conducted in accordance with the Declaration of Helsinki and was approved by the Nottingham Trent University Schools of Art and Design, Arts and Humanities and Architecture, Design and the Built Environment Research Ethics Committee of Nottingham Trent University (protocol code 2021/22-28 and date of approval 17/12/2021).
DOI: 10.25318/4210004901-eng
title: Child care businesses by service type, Saskatchewan, 2022

description: Count of centre-based, licensed home-based and unlicensed home-based child care business by type in Saskatchewan.
DOI: 10.35077/act-sip
title: Neuron Morphology data in tiff stack format from Patch-seq experiments in human neocortex, Cell ID 848610436

description: Human neocortical neurons display diverse morphology, physiology and gene expression profiles. We use a method called Patch-seq, where these three data modalities are assayed simultaneously from the same neuron, to understand how the genetic profile of human neocortical neuron types corresponds to their morphological and electrophysiological phenotypes. This collection may contain image stacks (TIFF), reconstruction files in image space (.swc, µm), a transformed file (.swc, µm) oriented so that the y axis extends vertically towards the pia surface, and a marker file (.marker, µm) indicating nodes where dendrites were truncated (10), reconstruction was not continued (20), or surface of tissue was closest to soma (30).
description: https://www.protocols.io/view/patch-seq-recording-and-extraction-detailed-protoc-5qpvoyb2bg4o/v2, https://www.protocols.io/view/3d-reconstruction-of-neurons-in-vaa3d-v-3-36wgq5683gk5/v3
description: DATASET METADATA: title:'Neuron Morphology data in tiff stack format from Patch-seq experiments in human neocortex, Cell ID 848610436', GeneralModality:'cell morphology', Technique:'Patch-seq' SPECIMEN METADATA: LocalID:'H19.06.352', Species:'Human', NCBITaxonomy:'NCBI:txid9606', Age:'26', Ageunit:'years', Sex:'Male', Genotype:'culture, enhancer AAV', OrganName:'Brain', SampleLocalID:'848610436', Atlas:'Ding, Song-Lin et al. “Comprehensive cellular-resolution atlas of the adult human brain.” The Journal of comparative neurology vol. 524,16 (2016): 3127-481. doi:10.1002/cne.24357', Locations:'MTG' INSTRUMENT METADATA: MicroscopeType:'Brightfield', MicroscopeManufacturerAndModel:'Zeiss AxioImager Z2 microscope', ObjectiveImmersion:'Oil' IMAGE METADATA: xAxis:'NA', yAxis:'NA', zAxis:'NA', Number:'NA', displayColor:'NA', stepSizeX:'0.114', stepSizeY:'0.114', stepSizeZ:'0.44'
DOI: 10.25318/4210004901-fra
title: Entreprises de garde d’enfants, par type de service, Saskatchewan, 2022

description: Nombre d’entreprises de services de garde en centre, en milieu familial avec permis et en milieu familial sans permis en Saskatchewan.
DOI: 10.25318/4210005001-eng
title: Child care businesses by service type, Alberta, 2022

description: Count of centre-based, licensed home-based and unlicensed home-based child care business by type in Alberta.
DOI: 10.25318/4210005001-fra
title: Entreprises de garde d’enfants, par type de service, Alberta, 2022

description: Nombre d’entreprises de services de garde en centre, en milieu familial avec permis et en milieu familial sans permis en Alberta.
DOI: 10.5287/ora-9ovjdypbb
title: Subthalamic nucleus correlates of force adaptation

description: Dataset available at: https://data.mrc.ox.ac.uk/data-set/subthalamic-nucleus-correlates-force-adaptation This code analyses behavioural data from a group of 16 Parkinson patients and 15 healthy control participants performing an action adaptation tasks, in which participants need to continuously adapt the applied force based on the feedback they receive. The first feedback ranges from 0 (worst) to 10 (best) points depending on the error between actual force and target force (Value-cue) and the second feedback indicates whether the force had been too low or too high (Direction-feedback). The main behavioural outcomes are measures of force production and force adaptation (folder 1, used for figure 1 in the published article). In patients local field potentials were recorded during the task and corresponding code is stored in folder 2 (figure 2&3). In 14 patients burst deep brain stimulation was applied during a second session. Its effects on behaviour and local field potentials are analysed with code from folder 3 and 4 (figures 4&5). The results have been published in a paper entitled ‘Neural underpinnings of action adaptation in the subthalamic nucleus’ by Herz et al.
DOI: 10.25318/4210005101-eng
title: Child care businesses by service type, British Columbia, 2022

description: Count of centre-based, licensed home-based and unlicensed home-based child care business by type in British Columbia.
DOI: 10.25318/4210005101-fra
title: Entreprises de garde d’enfants, par type de service, Colombie-Britannique, 2022

description: Nombre d’entreprises de services de garde en centre, en milieu familial avec permis et en milieu familial sans permis en Colombie-Britannique.
DOI: 10.25318/4210005201-eng
title: Child care businesses by service type, Territories, 2022

description: Count of centre-based, licensed home-based and unlicensed home-based child care business by type in the Territories.
DOI: 10.6084/m9.figshare.22211437
title: Chapter 5 Phylogenetic Tree

description: Phylogenetic supertree used in R code of Chapter 5 for 'A Cross-Species and Cross-Cultural Comparative Analysis of Sex and Gender Differences in Rough and Tumble Play'.
DOI: 10.6084/m9.figshare.22211437.v1
title: Chapter 5 Phylogenetic Tree

description: Phylogenetic supertree used in R code of Chapter 5 for 'A Cross-Species and Cross-Cultural Comparative Analysis of Sex and Gender Differences in Rough and Tumble Play'.
DOI: 10.25318/4210005201-fra
title: Entreprises de garde d’enfants, par type de service, Territoires, 2022

description: Nombre d’entreprises de services de garde en centre, en milieu familial avec permis et en milieu familial sans permis dans les Territoires.
DOI: 10.6084/m9.figshare.22211389
title: Chapter 5 Data

description: Data for Chapter 5 of 'A Cross-Species and Cross-Cultural Comparative Analysis of Sex and Gender Differences in Rough and Tumble Play'.
DOI: 10.6084/m9.figshare.22211389.v1
title: Chapter 5 Data

description: Data for Chapter 5 of 'A Cross-Species and Cross-Cultural Comparative Analysis of Sex and Gender Differences in Rough and Tumble Play'.
DOI: 10.6084/m9.figshare.22211383
title: Chapter 5 Coding Log

description: Coding process for Chapter 5 of 'A Cross-Species and Cross-Cultural Comparative Analysis of Sex and Gender Differences in Rough and Tumble Play'.
DOI: 10.6084/m9.figshare.22211383.v1
title: Chapter 5 Coding Log

description: Coding process for Chapter 5 of 'A Cross-Species and Cross-Cultural Comparative Analysis of Sex and Gender Differences in Rough and Tumble Play'.
DOI: 10.5281/zenodo.7859396
title: Datos históricos de los equipos y jugadores de la Liga ACB

description: Se incluyen dos conjuntos de datos. En primer lugar, el dataset de los equipos comprende el intervalo temporal entre 1957 y 2023, desde la primera temporada de la competición hasta la más actual. En este conjunto figuran los 78 equipos o clubes que han participado en la liga en alguna temporada a lo largo de su historia. Se proporciona información sobre su posición en el ránking histórico según el número de partidos que han ganado, su nombre, URL en el sitio web de la ACB y diversas estadísticas que resumen su rendimiento general en el tiempo, como su total de partidos jugados o de puntos anotados. El dataset de los jugadores abarca un intervalo temporal desde la temporada 1983-1984 a la temporada 2022-2023 y consta de 10742 filas y 37 columnas. Los datos se han recopilado a nivel de temporada, es decir, cada fila representa el rendimiento general del jugador en la temporada en cuestión. Además, se incluyen diversos datos personales o biográficos del jugador, como su nombre completo, altura, fecha y lugar de nacimiento. En cuanto a los datos estadísticos, estos resumen el desempeño del jugador a lo largo de la temporada, incluyendo, entre otros, el número de partidos que ha jugado, el total de minutos, puntos, asistencias, rebotes, etc.
DOI: 10.5281/zenodo.7859395
title: Datos históricos de los equipos y jugadores de la Liga ACB

description: Se incluyen dos conjuntos de datos. En primer lugar, el dataset de los equipos comprende el intervalo temporal entre 1957 y 2023, desde la primera temporada de la competición hasta la más actual. En este conjunto figuran los 78 equipos o clubes que han participado en la liga en alguna temporada a lo largo de su historia. Se proporciona información sobre su posición en el ránking histórico según el número de partidos que han ganado, su nombre, URL en el sitio web de la ACB y diversas estadísticas que resumen su rendimiento general en el tiempo, como su total de partidos jugados o de puntos anotados. El dataset de los jugadores abarca un intervalo temporal desde la temporada 1983-1984 a la temporada 2022-2023 y consta de 10742 filas y 37 columnas. Los datos se han recopilado a nivel de temporada, es decir, cada fila representa el rendimiento general del jugador en la temporada en cuestión. Además, se incluyen diversos datos personales o biográficos del jugador, como su nombre completo, altura, fecha y lugar de nacimiento. En cuanto a los datos estadísticos, estos resumen el desempeño del jugador a lo largo de la temporada, incluyendo, entre otros, el número de partidos que ha jugado, el total de minutos, puntos, asistencias, rebotes, etc.
DOI: 10.6084/m9.figshare.22211302.v1
title: Chapter 4 Phylogenetic Tree

description: Phylogenetic tree for use in R code of Chapter 4 of 'A Cross-Species and Cross-Cultural Comparative Analysis of Sex and Gender Differences in Rough and Tumble Play'.
DOI: 10.34740/kaggle/dsv/5508647
title: Mahanagar Yatayat Dataset
DOI: 10.6084/m9.figshare.22211296
title: Chapter 4 Data

description: Data for Chapter 4 of 'A Cross-Species and Cross-Cultural Comparative Analysis of Sex and Gender Differences in Rough and Tumble Play'.
DOI: 10.6084/m9.figshare.22211296.v1
title: Chapter 4 Data

description: Data for Chapter 4 of 'A Cross-Species and Cross-Cultural Comparative Analysis of Sex and Gender Differences in Rough and Tumble Play'.