cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11490927
title: MOESM2 of Impact of aromatase inhibitor treatment on global gene expression and its association with antiproliferative response in ER+ breast cancer in postmenopausal patients

description: Additional file 2. Table S1. Published gene-signatures. Table S2. Study endpoints. Table S3. Study demographics. Table S4. List of patients and their status of HER2, Ki67 and CCCA. Table S5. Ki67 data summary. (A) Percentage change in Ki67 expression after 2-weeks AI-treatment. (B) Anti-proliferative response summary. (C) Summary of number of tumours that reached CCCA. Table S6. Genes whose baseline expression significantly correlated with Change.Ki67 (p &lt; 0.005) in HER2- group. Table S7. Unpaired t-test of significance for the difference between two-group means: i) non-responders vs responders; ii) noCCCAs vs CCCAs in HER2- group. Table S8. Genes whose baseline expression significantly correlated with residual Ki67 (p &lt; 0.005) in HER2- group. Table S9. Pathway analysis of genes in Table S8. Table S10. Genes whose baseline expression is significantly different (p &lt; 0.001) between CCCA and noCCCA in HER2- group. Table S11. Genes significantly regulated by AI with p &lt; 0.005 by univariate Two-sample T-test in HER2- group. Table S12. Top 20 AI-downregulated / AI-upregulated genes, and additional AI-regulated genes of interest identified from HER2- paired tumours. Genes were ranked by fold-change (FC). The Significantly different (p-value) derived from Mann-Whitney test comparing the relative change in expression of a given gene in the HER2- group versus the HER2+ group. ns: p &gt;= 0.05. Table S13. Enriched canonical pathways of the significantly AI-regulated genes in Table S11. Table S14. Correlations of the change in ESR1 / gene-signatures and change in Ki67 / residual-Ki67 in i) HER2- group, ii) HER2+ group, iii) Significance of the difference between the 2 correlation-coefficients. Table S15. Genes significantly regulated by AI with p &lt; 0.005 by univariate Two-sample T-test in HER2+ group. Table S16. Genes whose baseline expression significantly correlated with Change.Ki67 (p &lt; 0.005) in HER2+ group. Table S17. Genes whose baseline expression significantly correlated with residual-Ki67 (p &lt; 0.005) in HER2+ group.
DOI: 10.6084/m9.figshare.12015210.v1
title: Additional file 6 of The self-organization model reveals systematic characteristics of aging

description: Additional file 6 : Table S8 data partition of DNA methylation profiles as well as the age. Note: 0 indicates genes are not selected as order-parameters, otherwise are selected within modules (Table S1-S2). 0 stands for training data, and 1 stands for test data in the third column (Table S7-S8). (XLS 242 kb)
DOI: 10.6084/m9.figshare.11490927.v1
title: MOESM2 of Impact of aromatase inhibitor treatment on global gene expression and its association with antiproliferative response in ER+ breast cancer in postmenopausal patients

description: Additional file 2. Table S1. Published gene-signatures. Table S2. Study endpoints. Table S3. Study demographics. Table S4. List of patients and their status of HER2, Ki67 and CCCA. Table S5. Ki67 data summary. (A) Percentage change in Ki67 expression after 2-weeks AI-treatment. (B) Anti-proliferative response summary. (C) Summary of number of tumours that reached CCCA. Table S6. Genes whose baseline expression significantly correlated with Change.Ki67 (p &lt; 0.005) in HER2- group. Table S7. Unpaired t-test of significance for the difference between two-group means: i) non-responders vs responders; ii) noCCCAs vs CCCAs in HER2- group. Table S8. Genes whose baseline expression significantly correlated with residual Ki67 (p &lt; 0.005) in HER2- group. Table S9. Pathway analysis of genes in Table S8. Table S10. Genes whose baseline expression is significantly different (p &lt; 0.001) between CCCA and noCCCA in HER2- group. Table S11. Genes significantly regulated by AI with p &lt; 0.005 by univariate Two-sample T-test in HER2- group. Table S12. Top 20 AI-downregulated / AI-upregulated genes, and additional AI-regulated genes of interest identified from HER2- paired tumours. Genes were ranked by fold-change (FC). The Significantly different (p-value) derived from Mann-Whitney test comparing the relative change in expression of a given gene in the HER2- group versus the HER2+ group. ns: p &gt;= 0.05. Table S13. Enriched canonical pathways of the significantly AI-regulated genes in Table S11. Table S14. Correlations of the change in ESR1 / gene-signatures and change in Ki67 / residual-Ki67 in i) HER2- group, ii) HER2+ group, iii) Significance of the difference between the 2 correlation-coefficients. Table S15. Genes significantly regulated by AI with p &lt; 0.005 by univariate Two-sample T-test in HER2+ group. Table S16. Genes whose baseline expression significantly correlated with Change.Ki67 (p &lt; 0.005) in HER2+ group. Table S17. Genes whose baseline expression significantly correlated with residual-Ki67 (p &lt; 0.005) in HER2+ group.
DOI: 10.6069/481v-zd15
title: Burkina Faso, Kenya, and Nigeria Family Planning Indicator Estimates 2000-2020

description: Estimates were produced for family planning for women ages 15-49 years at the 5x5 km-level in Burkina Faso, Kenya, and Nigeria from 2000-2020. They were produced using data from 65 population-based household surveys conducted in Africa between 2000 and 2020 that included information on contraception use and fertility, and subnational geographical location for women 15-49 years. This dataset includes: -GeoTIFF raster files for pixel-level estimates of CPR (contraceptive prevalence), mCPR (modern contraceptive prevalence), tCPR (traditional contraceptive prevalence), unmet need (unmet need for contraception), met need (met need for contraception with modern methods), and intent (intent to use contraception in the future) -CSV files of aggregated estimates at the country level and the first and second administrative divisions -Code files used to generate the estimates
DOI: 10.6084/m9.figshare.24598142
title: DNA methylation profiles in bovine sperm are associated with daughter fertility

description: The current decline in dairy cattle fertility has resulted in significant financial losses for dairy farmers. In the past, most efforts to improve dairy cattle fertility have been focused on either management or genetics, while epigenetics have received less attention. In this study, 12 bulls were selected from a provided 100 bull list and studied (High daughter fertility = 6, Low daughter fertility = 6) for Enzymatic methylation sequencing in the Illumina HiSeq platform according to the Canadian daughter fertility index (DFI), sires with high and low daughter fertility have average DFI of 92 and 112.6, respectively. And the bull list provided shows a mean DFI of 103.4. 252 CpGs with methylation differences greater than 20% (q &lt; 0.01) were identified, as well as the top 10 promising DMRs with a 15% methylation difference (q &lt; 1.1e<sup>−26</sup>). Interestingly, the DMCs and DMRs were found to be distributed more on the X chromosome than on the autosome, and they were covered by gene clusters linked to germ cell formation and development. In conclusion, these findings could enhance our ability to make informed decisions when deciding on superior bulls and advance our understanding of paternal epigenetic inheritance.
DOI: 10.6084/m9.figshare.24598142.v1
title: DNA methylation profiles in bovine sperm are associated with daughter fertility

description: The current decline in dairy cattle fertility has resulted in significant financial losses for dairy farmers. In the past, most efforts to improve dairy cattle fertility have been focused on either management or genetics, while epigenetics have received less attention. In this study, 12 bulls were selected from a provided 100 bull list and studied (High daughter fertility = 6, Low daughter fertility = 6) for Enzymatic methylation sequencing in the Illumina HiSeq platform according to the Canadian daughter fertility index (DFI), sires with high and low daughter fertility have average DFI of 92 and 112.6, respectively. And the bull list provided shows a mean DFI of 103.4. 252 CpGs with methylation differences greater than 20% (q &lt; 0.01) were identified, as well as the top 10 promising DMRs with a 15% methylation difference (q &lt; 1.1e<sup>−26</sup>). Interestingly, the DMCs and DMRs were found to be distributed more on the X chromosome than on the autosome, and they were covered by gene clusters linked to germ cell formation and development. In conclusion, these findings could enhance our ability to make informed decisions when deciding on superior bulls and advance our understanding of paternal epigenetic inheritance.
DOI: 10.5281/zenodo.10724398
title: HRTF databases measured on pinnae constructed with different materials

description: HRTF databases in SOFA format measured on the dummy head Brüel & Kjær Type 4128-C using pinnae constructed in different materials:



Silicone-rubber material (dummy head originals)

3D printing material: acrylonitrile butadiene styrene (ABS)

3D printing material: thermoplastic polyurethane (TPU)
DOI: 10.5281/zenodo.10724399
title: HRTF databases measured on pinnae constructed with different materials

description: HRTF databases in SOFA format measured on the dummy head Brüel & Kjær Type 4128-C using pinnae constructed in different materials:



Silicone-rubber material (dummy head originals)

3D printing material: acrylonitrile butadiene styrene (ABS)

3D printing material: thermoplastic polyurethane (TPU)
DOI: 10.48597/tqbc-f6rm
title: Inorganics in air and particle phase at Oak Park

description: Measurement of Inorganics in air and particle phase at Oak Park
DOI: 10.48597/uvpm-8e68
title: Organic_carbon_corrected at Ispra

description: Measurement of Organic_carbon_corrected at Ispra
DOI: 10.48597/uyaj-3ber
title: Cadmium at Haapasaari

description: Measurement of Cadmium at Haapasaari
DOI: 10.48597/v584-632s
title: OC/EC at Harwell

description: Measurement of OC/EC at Harwell
DOI: 10.48597/v62k-3nwn
title: Precipitation_amount at Payerne

description: Measurement of Precipitation_amount at Payerne
DOI: 10.48597/vqtb-ysay
title: Heavy metals at Neuglobsow

description: Measurement of Heavy metals at Neuglobsow
DOI: 10.48597/vy8g-nqjd
title: Pm25_mass at Mace Head

description: Measurement of Pm25_mass at Mace Head
DOI: 10.48597/wfzy-tehc
title: Meteorology at Montseny

description: Measurement of Meteorology at Montseny
DOI: 10.48597/x2xw-zwyy
title: Pm10_mass at Montseny

description: Measurement of Pm10_mass at Montseny
DOI: 10.48597/x5yj-gy53
title: Sulphur_dioxide at Payerne

description: Measurement of Sulphur_dioxide at Payerne
DOI: 10.48597/xjws-5e5x
title: Inorganics in precipitation at Oak Park

description: Measurement of Inorganics in precipitation at Oak Park
DOI: 10.48597/xkae-486s
title: Molybdenum at Neuglobsow

description: Measurement of Molybdenum at Neuglobsow
DOI: 10.48597/xkwk-qu6b
title: Nitrogen_dioxide at Zoseni

description: Measurement of Nitrogen_dioxide at Zoseni
DOI: 10.48597/xmws-w23p
title: Precipitation_amount at Westerland

description: Measurement of Precipitation_amount at Westerland
DOI: 10.48597/xrhp-g9k6
title: PFAS (per- and polyfluoroalkyl substances) at Zeppelin mountain (Ny-Ålesund)

description: Measurement of PFAS (per- and polyfluoroalkyl substances) at Zeppelin mountain (Ny-Ålesund)
DOI: 10.48597/xtcm-cejb
title: Inorganics in precipitation at Oak Park

description: Measurement of Inorganics in precipitation at Oak Park
DOI: 10.48597/xwrj-7tqy
title: Inorganics in air and particle phase at Cabauw Zijdeweg

description: Measurement of Inorganics in air and particle phase at Cabauw Zijdeweg
DOI: 10.48597/yqst-9rcr
title: Strontium at Schauinsland

description: Measurement of Strontium at Schauinsland
DOI: 10.48597/ywn4-zprz
title: Particle_number_size_distribution at Mt Cimone

description: Measurement of Particle_number_size_distribution at Mt Cimone
DOI: 10.48597/zn5f-543h
title: Heavy metals and inorganics in precipitation at De Zilk

description: Measurement of Heavy metals and inorganics in precipitation at De Zilk
DOI: 10.48597/zqt8-tbbb
title: Pm10_mass at Zingst

description: Measurement of Pm10_mass at Zingst
DOI: 10.48597/zvcn-rrn5
title: Inorganics in air and particle phase at Payerne

description: Measurement of Inorganics in air and particle phase at Payerne
DOI: 10.48597/25nx-z9t3
title: Measurement of Sulphate_corrected at Rucava

description: Measurement of Sulphate_corrected at Rucava
DOI: 10.48597/265a-t3tx
title: Measurement of Inorganics in precipitation at Ridge of Capard

description: Measurement of Inorganics in precipitation at Ridge of Capard
DOI: 10.48597/2a62-54u2
title: Measurement of Inorganics in air and particle phase at Janiskoski

description: Measurement of Inorganics in air and particle phase at Janiskoski
DOI: 10.48597/2am3-jdfg
title: Measurement of Inorganics in air and particle phase at Janiskoski

description: Measurement of Inorganics in air and particle phase at Janiskoski
DOI: 10.48597/2kfj-pnkp
title: Measurement of Chloride at Rucava

description: Measurement of Chloride at Rucava
DOI: 10.6084/m9.figshare.11490966
title: MOESM8 of Impact of aromatase inhibitor treatment on global gene expression and its association with antiproliferative response in ER+ breast cancer in postmenopausal patients

description: Additional file 8: Matrices of correlation coefficient and p value. Table S18. Spearman Rank Correlation Matrix (r-value and p -value) of baseline gene signature scores and percentage of two-week change in Ki67 and residual Ki67 expression. r-values bottom, p-values top. (a) HER2- tumours, n=155 (the Signature name was sorted based on the rho-values of correlations between GS-score and residual.Ki67; (b) HER2+ tumours, n=23. Table S19. Spearman correlations (r-value and p -value) between on-treatment gene signature scores and i) percentage of two-week change in Ki67 protein expression and ii) residual KI67. r-values bottom, p-values top. (a) HER2- tumours, n=135; (b) HER2+ tumours, n=22. Table S20. Spearman correlations (r-value and p -value) between change in gene signature scores and i) percentage of two-week change in Ki67 protein expression and ii) residual KI67. r-values bottom, p-values top. (a) HER2- tumours, n=135; (b) HER2+ tumours, n=22.
DOI: 10.48597/2wrd-qjk7
title: Measurement of Inorganics in air and particle phase at Janiskoski

description: Measurement of Inorganics in air and particle phase at Janiskoski
DOI: 10.48597/2wy9-87he
title: Measurement of Inorganics in air and particle phase at Ähtäri II

description: Measurement of Inorganics in air and particle phase at Ähtäri II
DOI: 10.48597/2y7b-zj6h
title: Measurement of Sulphate_corrected at Rucava

description: Measurement of Sulphate_corrected at Rucava
DOI: 10.48597/3he6-9zs6
title: Measurement of Sulphate_total at The Burren

description: Measurement of Sulphate_total at The Burren
DOI: 10.6084/m9.figshare.11490966.v1
title: MOESM8 of Impact of aromatase inhibitor treatment on global gene expression and its association with antiproliferative response in ER+ breast cancer in postmenopausal patients

description: Additional file 8: Matrices of correlation coefficient and p value. Table S18. Spearman Rank Correlation Matrix (r-value and p -value) of baseline gene signature scores and percentage of two-week change in Ki67 and residual Ki67 expression. r-values bottom, p-values top. (a) HER2- tumours, n=155 (the Signature name was sorted based on the rho-values of correlations between GS-score and residual.Ki67; (b) HER2+ tumours, n=23. Table S19. Spearman correlations (r-value and p -value) between on-treatment gene signature scores and i) percentage of two-week change in Ki67 protein expression and ii) residual KI67. r-values bottom, p-values top. (a) HER2- tumours, n=135; (b) HER2+ tumours, n=22. Table S20. Spearman correlations (r-value and p -value) between change in gene signature scores and i) percentage of two-week change in Ki67 protein expression and ii) residual KI67. r-values bottom, p-values top. (a) HER2- tumours, n=135; (b) HER2+ tumours, n=22.
DOI: 10.48597/3x93-ahyr
title: Measurement of Sulphate_total at The Burren

description: Measurement of Sulphate_total at The Burren
DOI: 10.48597/3xma-yk6u
title: Measurement of Inorganics in air and particle phase at Janiskoski

description: Measurement of Inorganics in air and particle phase at Janiskoski
DOI: 10.48597/55xd-svwh
title: Measurement of Sulphate_total at The Burren

description: Measurement of Sulphate_total at The Burren
DOI: 10.48597/5hcd-3chf
title: Measurement of Sulphate_corrected at Zoseni

description: Measurement of Sulphate_corrected at Zoseni
DOI: 10.48597/5k3y-4v27
title: Measurement of Inorganics in air and particle phase at Ähtäri II

description: Measurement of Inorganics in air and particle phase at Ähtäri II
DOI: 10.48597/5pcz-sv7q
title: Measurement of Inorganics in precipitation at Janiskoski

description: Measurement of Inorganics in precipitation at Janiskoski
DOI: 10.48597/5ptf-m8x6
title: Measurement of Inorganics in air and particle phase at Ähtäri II

description: Measurement of Inorganics in air and particle phase at Ähtäri II
DOI: 10.48597/65fy-dhm3
title: Measurement of Sulphate_corrected at Rucava

description: Measurement of Sulphate_corrected at Rucava
DOI: 10.48597/6kx7-3wtm
title: Measurement of Inorganics in precipitation at Janiskoski

description: Measurement of Inorganics in precipitation at Janiskoski
DOI: 10.48597/6s5s-fr4b
title: Measurement of Sulphate_corrected at Rucava

description: Measurement of Sulphate_corrected at Rucava
DOI: 10.48597/73ag-tww6
title: Measurement of Calcium at Turlough Hill

description: Measurement of Calcium at Turlough Hill
DOI: 10.48597/7w73-w93n
title: Measurement of Sulphur_dioxide at Montandon

description: Measurement of Sulphur_dioxide at Montandon
DOI: 10.48597/82e2-g84q
title: Measurement of Inorganics in precipitation at Turlough Hill

description: Measurement of Inorganics in precipitation at Turlough Hill
DOI: 10.5281/zenodo.10728745
title: Data assimilation reconstructted South American monsoon during the last millennium

description: This dataset comprises the reconstructed DJF (December, January, February) averages for δ18O, precipitation, and wind-based data assimilation. It is important to highlight that this dataset has been validated for tropical South America and on centennial scales. Therefore, if it is intended to be used for studies concerning other regions or different time scales, the validity of the dataset should be verified beforehand.
DOI: 10.5281/zenodo.10728746
title: Data assimilation reconstructted South American monsoon during the last millennium

description: This dataset comprises the reconstructed DJF (December, January, February) averages for δ18O, precipitation, and wind-based data assimilation. It is important to highlight that this dataset has been validated for tropical South America and on centennial scales. Therefore, if it is intended to be used for studies concerning other regions or different time scales, the validity of the dataset should be verified beforehand.
DOI: 10.48597/83ku-hhtz
title: Measurement of Sulphate_corrected at Zoseni

description: Measurement of Sulphate_corrected at Zoseni
DOI: 10.48597/8kz2-6t8g
title: Measurement of Sulphate_total at Ridge of Capard

description: Measurement of Sulphate_total at Ridge of Capard
DOI: 10.48597/8qdg-x8r6
title: Measurement of Inorganics in precipitation at Ridge of Capard

description: Measurement of Inorganics in precipitation at Ridge of Capard
DOI: 10.48597/8v34-u6y4
title: Measurement of Sulphate_corrected at Zoseni

description: Measurement of Sulphate_corrected at Zoseni
DOI: 10.48597/9dnj-gyzq
title: Measurement of Inorganics in precipitation at Turlough Hill

description: Measurement of Inorganics in precipitation at Turlough Hill
DOI: 10.48597/9m9g-vy39
title: Measurement of Sulphur_dioxide at Montandon

description: Measurement of Sulphur_dioxide at Montandon
DOI: 10.48597/abpk-gg4b
title: Measurement of Sulphate_total at The Burren

description: Measurement of Sulphate_total at The Burren
DOI: 10.48597/bbfg-58f3
title: Measurement of Sulphate_total at Ridge of Capard

description: Measurement of Sulphate_total at Ridge of Capard
DOI: 10.48597/bhpy-jy2j
title: Measurement of Sulphate_corrected at Zoseni

description: Measurement of Sulphate_corrected at Zoseni
DOI: 10.48597/bzrc-u6jm
title: Measurement of Sulphur_dioxide at Montandon

description: Measurement of Sulphur_dioxide at Montandon
DOI: 10.48597/bzz8-przh
title: Measurement of Chloride at Rucava

description: Measurement of Chloride at Rucava
DOI: 10.48597/cc85-h7nd
title: Measurement of Sulphate_corrected at Rucava

description: Measurement of Sulphate_corrected at Rucava
DOI: 10.25592/uhhfdm.14156
title: Appendix 2_Data Set Survey on References to Non-Binary Individuals in German

description: Data Set of the survey responses for the publication: Vorberger, Lars: Empirical Evidence on the Reference to Non-Binary Individuals in German - without answers to the open questions.
DOI: 10.48597/cgmm-3tt6
title: Measurement of Sulphur_dioxide at Montandon

description: Measurement of Sulphur_dioxide at Montandon
DOI: 10.25592/uhhfdm.14154
title: Appendix 1_List of guides on gender-fair language

description: Overview of the evaluated guides on gender-fair language for the publication: Vorberger, Lars: Empirical Evidence on the Reference to Non-Binary Individuals in German.
DOI: 10.25592/uhhfdm.14155
title: Appendix 2_Data Set Survey on References to Non-Binary Individuals in German

description: Data Set of the survey responses for the publication: Vorberger, Lars: Empirical Evidence on the Reference to Non-Binary Individuals in German - without answers to the open questions.
DOI: 10.48597/chx5-fwvv
title: Measurement of Sulphate_corrected at Rucava

description: Measurement of Sulphate_corrected at Rucava
DOI: 10.48597/d9gs-2zuf
title: Measurement of Sulphur_dioxide at Montandon

description: Measurement of Sulphur_dioxide at Montandon
DOI: 10.25592/uhhfdm.14153
title: Appendix 1_List of guides on gender-fair language

description: Overview of the evaluated guides on gender-fair language for the publication: Vorberger, Lars: Empirical Evidence on the Reference to Non-Binary Individuals in German.
DOI: 10.48597/dss6-zbtc
title: Measurement of Inorganics in air and particle phase at Janiskoski

description: Measurement of Inorganics in air and particle phase at Janiskoski
DOI: 10.48597/esf7-8w2c
title: Measurement of Inorganics in precipitation at The Burren

description: Measurement of Inorganics in precipitation at The Burren
DOI: 10.48597/fh8t-8qdz
title: Measurement of Inorganics in precipitation at The Burren

description: Measurement of Inorganics in precipitation at The Burren
DOI: 10.48597/fsc6-n84n
title: Measurement of Inorganics in air and particle phase at Janiskoski

description: Measurement of Inorganics in air and particle phase at Janiskoski
DOI: 10.48597/g2hg-73au
title: Measurement of Sulphur_dioxide at Montandon

description: Measurement of Sulphur_dioxide at Montandon
DOI: 10.48597/ggrh-r36x
title: Measurement of Inorganics in precipitation at Janiskoski

description: Measurement of Inorganics in precipitation at Janiskoski
DOI: 10.48597/gx7e-2xjr
title: Measurement of Sulphate_corrected at Rucava

description: Measurement of Sulphate_corrected at Rucava
DOI: 10.48597/gyjk-5xv4
title: Measurement of Inorganics in precipitation at Janiskoski

description: Measurement of Inorganics in precipitation at Janiskoski
DOI: 10.48597/h8et-tbq5
title: Measurement of Inorganics in air and particle phase at Janiskoski

description: Measurement of Inorganics in air and particle phase at Janiskoski
DOI: 10.48597/hery-mv3b
title: Measurement of Sulphate_corrected at Rucava

description: Measurement of Sulphate_corrected at Rucava
DOI: 10.48597/hnwx-d8xs
title: Measurement of Sulphate_corrected at Zoseni

description: Measurement of Sulphate_corrected at Zoseni
DOI: 10.48597/jpz4-93b9
title: Measurement of Sulphate_corrected at Rucava

description: Measurement of Sulphate_corrected at Rucava