cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3735412_d1
title: Additional file 1: of 
                     Loa loa vectors Chrysops spp.: perspectives on research, distribution, bionomics, and implications for elimination of lymphatic filariasis and onchocerciasis

description: Chrysops literature database. (XLSX 45 kb)
DOI: 10.6084/m9.figshare.c.3735406_d2
title: Additional file 11: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Mediation analysis. Outcome statistics and gene disease associations of (partial) mediators between pesticide exposure and body fat measures in PON1 R-allele carriers. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.c.3735427_d6
title: Additional file 6: of Quantitative evaluation and reversion analysis of the attractor landscapes of an intracellular regulatory network for colorectal cancer

description: The molecular profiles of CMS cancer cells, statistical significance analysis of reversion targets, and synergistic effect analysis of every two nodes inhibition. (XLSX 67Â kb)
DOI: 10.6084/m9.figshare.c.3735406_d9
title: Additional file 6: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Sig-DMPs overlapping with DMRs (interaction model). For each DMP P values are given for the interaction between pesticide exposure and PON1 genotype (P.Value.int_EXP:PON1), and for the exposure effect PON1 R-allele carrier group (P.Value.EXP_when PON1 QR/RR). The mean beta values in each exposure group are listed. (XLSX 82 kb)
DOI: 10.6084/m9.figshare.c.3735406_d10.v1
title: Additional file 7: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Sig-DMPs overlapping with DMRs (model without interaction). For each DMP P values are given for the PON1 effect (P.Value.PON1) and exposure effect (P.Value.EXP). The mean beta values in each exposure group are listed. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3735430_d4.v1
title: Additional file 4: Table S4. of Retention of normal glia function by an isoform-selective protein kinase inhibitor drug candidate that modulates cytokine production and cognitive outcomes

description: BV2 assays. Source data for Fig. 7. (XLS 80 kb)
DOI: 10.6084/m9.figshare.c.3735406_d10
title: Additional file 7: of Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

description: Sig-DMPs overlapping with DMRs (model without interaction). For each DMP P values are given for the PON1 effect (P.Value.PON1) and exposure effect (P.Value.EXP). The mean beta values in each exposure group are listed. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3735430_d4
title: Additional file 4: Table S4. of Retention of normal glia function by an isoform-selective protein kinase inhibitor drug candidate that modulates cytokine production and cognitive outcomes

description: BV2 assays. Source data for Fig. 7. (XLS 80 kb)
DOI: 10.6084/m9.figshare.c.3735442_d1.v1
title: Additional file 1: Table S1. of Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range

description: Specimens of Polyrhachis used in this study. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3735496_d1.v1
title: Additional file 1: of Prevalence of group a streptococcus pharyngeal carriage and clinical manifestations in school children aged 5â  15Â yrs in Wakiso District, Uganda

description: Group a streptococcus dataset Wakiso, Uganda. (XLS 133 kb)
DOI: 10.6084/m9.figshare.c.3735496_d1
title: Additional file 1: of Prevalence of group a streptococcus pharyngeal carriage and clinical manifestations in school children aged 5â  15Â yrs in Wakiso District, Uganda

description: Group a streptococcus dataset Wakiso, Uganda. (XLS 133 kb)
DOI: 10.6084/m9.figshare.c.3735469_d3.v1
title: MOESM3 of No evidence of a role of the Î˛4 subunit of the nicotinic acetylcholine receptor in alcohol-related behaviors

description: Additional file 3. Raw experimental data.
DOI: 10.6084/m9.figshare.c.3735469_d3
title: MOESM3 of No evidence of a role of the Î˛4 subunit of the nicotinic acetylcholine receptor in alcohol-related behaviors

description: Additional file 3. Raw experimental data.
DOI: 10.6084/m9.figshare.c.3737710_d3.v1
title: Additional file 12: Table S5. of Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

description: Species-specific pancRNA-partnered genes. (XLS 64Â kb)
DOI: 10.15468/dl.weqbd6
title: Occurrence Download

description: A dataset containing 3681 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is ICM-CSIC: MINKA_BioPlatgestMet observatorio de ciencia ciudadana"
 ]
}

 The dataset includes 3681 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038661-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3737710_d3
title: Additional file 12: Table S5. of Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

description: Species-specific pancRNA-partnered genes. (XLS 64Â kb)
DOI: 10.6084/m9.figshare.c.3737710_d4.v1
title: Additional file 1: Table S1. of Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

description: Directional RNA-seq used in this study. (XLS 63Â kb)
DOI: 10.6084/m9.figshare.c.3737710_d4
title: Additional file 1: Table S1. of Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

description: Directional RNA-seq used in this study. (XLS 63Â kb)
DOI: 10.6084/m9.figshare.c.3737752_d1.v1
title: Additional file 1: of Prediction of the optimal depth for superior vena cava cannulae with cardiac computed tomography during minimally invasive cardiac surgery: a prospective observational cohort study

description: The dataset. This file shows the dataset of our study. (XLSX 14Â kb)
DOI: 10.6084/m9.figshare.c.3737749_d1.v1
title: Additional file 1: of Molecular epidemiology of Rotavirus causing diarrhea among children less than five years of age visiting national level children hospitals, Nepal

description: The data generated during the study. It includes the data generated like age/sex, month of hospital visit, number of diarrhea and vomiting in excel sheet. (XLSX 50Â kb)
DOI: 10.6084/m9.figshare.c.3737710_d5.v1
title: Additional file 2: Table S2. of Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

description: Mouse ENCODE ChIP-seq data used in this study. (XLS 28Â kb)
DOI: 10.6084/m9.figshare.c.3737710_d5
title: Additional file 2: Table S2. of Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

description: Mouse ENCODE ChIP-seq data used in this study. (XLS 28Â kb)
DOI: 10.6084/m9.figshare.c.3737800_d2.v1
title: Additional file 1: Dataset S1. of Medium term water deficit elicits distinct transcriptome responses in Eucalyptus species of contrasting environmental origin

description: Spreadsheet containing filter and mapping summary data. (XLS 28 kb)
DOI: 10.6084/m9.figshare.c.3737812_d1.v1
title: Additional file 1: of Characterization and virulence clustering analysis of extraintestinal pathogenic Escherichia coli isolated from swine in China

description: MLST and VR genes profiles. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3737800_d2
title: Additional file 1: Dataset S1. of Medium term water deficit elicits distinct transcriptome responses in Eucalyptus species of contrasting environmental origin

description: Spreadsheet containing filter and mapping summary data. (XLS 28 kb)
DOI: 10.6084/m9.figshare.c.3737812_d1
title: Additional file 1: of Characterization and virulence clustering analysis of extraintestinal pathogenic Escherichia coli isolated from swine in China

description: MLST and VR genes profiles. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3737800_d3.v1
title: Additional file 2: Dataset S2. of Medium term water deficit elicits distinct transcriptome responses in Eucalyptus species of contrasting environmental origin

description: Spread sheet containing the full analysis of the RNAseq data including all 23,623 identified genes (all analysis), genes significantly differentially expressed due to treatment (diff_res_to_treat) and species specific genes with significant differential expression (spp_diff_res_to_treat). (XLSX 13892 kb)
DOI: 10.6084/m9.figshare.c.3737809_d2.v1
title: Additional file 2: Table S1. of Novel soil-inhabiting clades fill gaps in the fungal tree of life

description: Primers developed and used for this study. Table S2. List of environmental sources used in Additional file 1: Figures S1-S3 and accounted for in clade profiles (Text S1). Data S1. Metadata, clade assignment, and accessions of individual OTUs. (XLSX 1032Â kb)
DOI: 10.6084/m9.figshare.c.3737809_d2
title: Additional file 2: Table S1. of Novel soil-inhabiting clades fill gaps in the fungal tree of life

description: Primers developed and used for this study. Table S2. List of environmental sources used in Additional file 1: Figures S1-S3 and accounted for in clade profiles (Text S1). Data S1. Metadata, clade assignment, and accessions of individual OTUs. (XLSX 1032Â kb)
DOI: 10.6084/m9.figshare.c.3738005_d2.v1
title: Additional file 2: of Real life results in using 5-ASA for maintaining mild to moderate UC patients in Japan, a multi-center study, OPTIMUM Study

description: The name of committee. (XLS 50 kb)
DOI: 10.6084/m9.figshare.c.3738005_d2
title: Additional file 2: of Real life results in using 5-ASA for maintaining mild to moderate UC patients in Japan, a multi-center study, OPTIMUM Study

description: The name of committee. (XLS 50 kb)
DOI: 10.6084/m9.figshare.c.3738011_d1.v1
title: Additional file 1: of Prevalence and determinants of use of complementary and alternative medicine by hypertensive patients attending primary health care facilities in Kinshasa, Democratic Republic of the Congo: a cross-sectional study

description: Dataset. This file contains data supporting the results of this study. (DTA 405 kb)
DOI: 10.6084/m9.figshare.c.3738011_d1
title: Additional file 1: of Prevalence and determinants of use of complementary and alternative medicine by hypertensive patients attending primary health care facilities in Kinshasa, Democratic Republic of the Congo: a cross-sectional study

description: Dataset. This file contains data supporting the results of this study. (DTA 405 kb)
DOI: 10.6084/m9.figshare.4836341
title: Lupe-Manumea coo comparison.csv

description: Comparison of coo-calls of Didunculus strigirostris and Ducula pacifia of Samoa for field identification
DOI: 10.15468/dl.mb7ed7
title: Occurrence Download

description: A dataset containing 4796 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Platalea leucorodia Linnaeus, 1758"
 ]
}

 The dataset includes 4796 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038662-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14499418
title: Dataset related to: "A Sensor-Based Upper Limb Treatment in Hemiplegic Patients: Results from a Randomized Pilot Study."

description: We provide the raw data used for the following article:

Vanoglio F, Comini L, Gaiani M, Bonometti GP, Luisa A, Bernocchi P. A Sensor-Based Upper Limb Treatment in Hemiplegic Patients: Results from a Randomized Pilot Study. Sensors (Basel). 2024 Apr 17;24(8):2574. doi: 10.3390/s24082574.

Abstract



In post-stroke patients, the disabling motor deficit mainly affects the upper limb. The focus of rehabilitation is improving upper limb function and reducing long-term disability. This study aims to evaluate the feasibility of using the Gloreha Aria (R-Lead), a sensor-based upper limb in-hospital rehabilitation, compared with conventional physiotherapist-led training in subacute hemiplegic patients. Twenty-one patients were recruited and randomised 1:1 to a sensor-based group (treatment group TG) or a conventional group (control group, CG). All patients performed 30 sessions of 30 min each of dedicated upper limb rehabilitation. The Fugl-Meyer Assessment for Upper Extremity (FMA-UE) was the primary evaluation., both as a motor score and as individual items. Secondary evaluations were Functional Independence Measure; global disability assessed with the Modified Barthel Index; Motor Evaluation Scale for UE in stroke; power grip; and arm, shoulder, and hand disability. All the enrolled patients, 10 in the TG and 11 in the CG, completed all hand rehabilitation sessions during their hospital stay without experiencing any adverse events. FMA-UE scores in upper limb motor function improved in both groups [delta change CG (11.8 ± 9.2) vs. TG (12.7 ± 8.6)]. The score at T1 for FMA joint pain (21.8 vs. 24 best score) suggests the use of the Gloreha Aria (R-Lead) as feasible in improving arm function abilities in post-stroke patients.
DOI: 10.5281/zenodo.14499419
title: Dataset related to: "A Sensor-Based Upper Limb Treatment in Hemiplegic Patients: Results from a Randomized Pilot Study."

description: We provide the raw data used for the following article:

Vanoglio F, Comini L, Gaiani M, Bonometti GP, Luisa A, Bernocchi P. A Sensor-Based Upper Limb Treatment in Hemiplegic Patients: Results from a Randomized Pilot Study. Sensors (Basel). 2024 Apr 17;24(8):2574. doi: 10.3390/s24082574.

Abstract



In post-stroke patients, the disabling motor deficit mainly affects the upper limb. The focus of rehabilitation is improving upper limb function and reducing long-term disability. This study aims to evaluate the feasibility of using the Gloreha Aria (R-Lead), a sensor-based upper limb in-hospital rehabilitation, compared with conventional physiotherapist-led training in subacute hemiplegic patients. Twenty-one patients were recruited and randomised 1:1 to a sensor-based group (treatment group TG) or a conventional group (control group, CG). All patients performed 30 sessions of 30 min each of dedicated upper limb rehabilitation. The Fugl-Meyer Assessment for Upper Extremity (FMA-UE) was the primary evaluation., both as a motor score and as individual items. Secondary evaluations were Functional Independence Measure; global disability assessed with the Modified Barthel Index; Motor Evaluation Scale for UE in stroke; power grip; and arm, shoulder, and hand disability. All the enrolled patients, 10 in the TG and 11 in the CG, completed all hand rehabilitation sessions during their hospital stay without experiencing any adverse events. FMA-UE scores in upper limb motor function improved in both groups [delta change CG (11.8 ± 9.2) vs. TG (12.7 ± 8.6)]. The score at T1 for FMA joint pain (21.8 vs. 24 best score) suggests the use of the Gloreha Aria (R-Lead) as feasible in improving arm function abilities in post-stroke patients.
DOI: 10.5281/zenodo.14512361
title: RNAseq data of SUM159 and SW620 ALDHbr and ALDHneg cells treated with Nifuroxazide Vs control condition (DMSO)

description: In order to understand the biological processes occurring in breast (SUM159) and colon (SW620) cancer stem cells (ALDHpos) and non-cancer stem cells (ALDHneg) when exposed to Nifuroxazide compare to control condition, we performed a comparative transcriptomic study on: 

 

NIF_ALDpos (breast CSC exposed 30h to Nifuroxazide),

NIF_ALDneg (non-breast CSC exposed 30h to Nifuroxazide)

CTRLpos (breast CSC exposed 30h to DMSO)

CTRLneg (non-breast CSC exposed to DMSO) 

AldhposNIF (colon CSC exposed 30h to Nifuroxazide),

AldhnegNIF (non-colon CSC exposed 30h to Nifuroxazide)

Aldhpos (colon CSC exposed 30h to DMSO)

Aldhneg (noncolon CSC exposed to DMSO) 

 

We preformed bulk RNA-sequencing on triplicates for each condition.

The text file contains raw counts data of our RNA-seq analysis.
DOI: 10.5281/zenodo.14512362
title: RNAseq data of SUM159 and SW620 ALDHbr and ALDHneg cells treated with Nifuroxazide Vs control condition (DMSO)

description: In order to understand the biological processes occurring in breast (SUM159) and colon (SW620) cancer stem cells (ALDHpos) and non-cancer stem cells (ALDHneg) when exposed to Nifuroxazide compare to control condition, we performed a comparative transcriptomic study on: 

 

NIF_ALDpos (breast CSC exposed 30h to Nifuroxazide),

NIF_ALDneg (non-breast CSC exposed 30h to Nifuroxazide)

CTRLpos (breast CSC exposed 30h to DMSO)

CTRLneg (non-breast CSC exposed to DMSO) 

AldhposNIF (colon CSC exposed 30h to Nifuroxazide),

AldhnegNIF (non-colon CSC exposed 30h to Nifuroxazide)

Aldhpos (colon CSC exposed 30h to DMSO)

Aldhneg (noncolon CSC exposed to DMSO) 

 

We preformed bulk RNA-sequencing on triplicates for each condition.

The text file contains raw counts data of our RNA-seq analysis.
DOI: 10.5281/zenodo.14499073
title: Dataset related to: "Insights into Digital MedicRehApp Maintenance Model for Pulmonary Telerehabilitation: Observational Study."

description: We provide the raw data used for the following article:

Vitacca M, Paneroni M, Saleri M, Beccaluva CG. Insights into Digital MedicRehApp Maintenance Model for Pulmonary Telerehabilitation: Observational Study. Healthcare (Basel). 2024 Jul 9;12(14):1372. doi: 10.3390/healthcare12141372. 

Abstract



Maintenance strategies after center-based pulmonary rehabilitation (CBPR) are currently needed. This study aimed to evaluate the feasibility and effect on the quality of life of a home-based pulmonary rehabilitation (HBPR) program delivered by a digital app. As secondary objectives, the patients' adherence, symptoms, effort tolerance changes, and safety were evaluated. This was a single-arm prospective observational monocentric study on 30 patients referred for chronic respiratory diseases. The prescription and evaluations of the HBPR programs performed at the pulmonary facility and delivery of structured exercise and counselling by the digital health tool were achieved under the supervision of a respiratory therapist. Digital capabilities included aerobic, strength, and respiratory exercises, which were monitored with a fitness tracker. The engagement rate of the HBPR after the CBPR was 1:10. The EuroQoL VAS score increased from 66.2 ± 16.28 to 75.60 ± 16.07 (p < 0.001), mainly in younger subjects. No patient was lost during the HBPR program. The global adherence session rate was 94%. The Medical Research Council dyspnea scale (MRC), COPD Assessment Test (CAT) score, and six-minute walking test (6MWT) improved from admission into the pulmonary unit to the end of the HBPR program. Between the beginning and end of the CBPR, the CAT score decreased from 14.4 ± 6.39 to 8.50 ± 5.39 (p < 0.001), the MRC decreased from 1.87 ± 0.9 to 1.17 ± 0.83 (p < 0.001), and the 6MWT increased from 451 ± 93 to 473 ± 115 m (p < 0.05). The average Technology Acceptance Model score for usability was high (145 ± 12.1) and no adverse events occurred during the HBPR program. This HBPR model seemed to be feasible and well-accepted by patients, leading to improvements in quality of life, symptoms, and functional capacity.
DOI: 10.5281/zenodo.14499074
title: Dataset related to: "Insights into Digital MedicRehApp Maintenance Model for Pulmonary Telerehabilitation: Observational Study."

description: We provide the raw data used for the following article:

Vitacca M, Paneroni M, Saleri M, Beccaluva CG. Insights into Digital MedicRehApp Maintenance Model for Pulmonary Telerehabilitation: Observational Study. Healthcare (Basel). 2024 Jul 9;12(14):1372. doi: 10.3390/healthcare12141372. 

Abstract



Maintenance strategies after center-based pulmonary rehabilitation (CBPR) are currently needed. This study aimed to evaluate the feasibility and effect on the quality of life of a home-based pulmonary rehabilitation (HBPR) program delivered by a digital app. As secondary objectives, the patients' adherence, symptoms, effort tolerance changes, and safety were evaluated. This was a single-arm prospective observational monocentric study on 30 patients referred for chronic respiratory diseases. The prescription and evaluations of the HBPR programs performed at the pulmonary facility and delivery of structured exercise and counselling by the digital health tool were achieved under the supervision of a respiratory therapist. Digital capabilities included aerobic, strength, and respiratory exercises, which were monitored with a fitness tracker. The engagement rate of the HBPR after the CBPR was 1:10. The EuroQoL VAS score increased from 66.2 ± 16.28 to 75.60 ± 16.07 (p < 0.001), mainly in younger subjects. No patient was lost during the HBPR program. The global adherence session rate was 94%. The Medical Research Council dyspnea scale (MRC), COPD Assessment Test (CAT) score, and six-minute walking test (6MWT) improved from admission into the pulmonary unit to the end of the HBPR program. Between the beginning and end of the CBPR, the CAT score decreased from 14.4 ± 6.39 to 8.50 ± 5.39 (p < 0.001), the MRC decreased from 1.87 ± 0.9 to 1.17 ± 0.83 (p < 0.001), and the 6MWT increased from 451 ± 93 to 473 ± 115 m (p < 0.05). The average Technology Acceptance Model score for usability was high (145 ± 12.1) and no adverse events occurred during the HBPR program. This HBPR model seemed to be feasible and well-accepted by patients, leading to improvements in quality of life, symptoms, and functional capacity.
DOI: 10.6084/m9.figshare.c.3739970_d2.v1
title: MOESM2 of The state of asthma epidemiology: an overview of systematic reviews and their quality

description: Additional file 2. Full indexed list of the included systematic reviews including AMSTAR scores.
DOI: 10.6084/m9.figshare.c.3739934_d6.v1
title: MOESM6 of Toxicity of nano- and ionic silver to embryonic stem cells: a comparative toxicogenomic study

description: Additional file 6: Table S4. Lists of 120 GO terms in the biological process (BP) category enriched from the 101 genes regulated by AgNPs. DAVID was used for the analysis. The Mus musculus (mouse) whole genome was used as background. Statistical enrichment was determined through a modified Fisherâ  s exact test (pÂ 2 (default settings in DAVID).