cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3646529_d10.v1
title: Additional file 6: of Variant detection and runs of homozygosity in next generation sequencing data elucidate the genetic background of Lundehund syndrome

description: Private runs of homozygosity for LS-unaffected Lundehund in 500-SNP windows. The chromosomal position of ROH regions, number of SNPs in these regions (n), size in base pairs (size_bp), canine genes (gene) and human orthologues (human gene) are shown. (XLSX 65 kb)
DOI: 10.6084/m9.figshare.c.3648626_d2.v1
title: Additional file 1 of Concordant morphological and molecular clines in a contact zone of the Common and Spined toad (Bufo bufo and B. spinosus) in the northwest of France

description: Appendix I. Genetic polymorphisms in a transect across 17 Bufo spinosus and B. bufo populations in northwestern France, estimated for 12 microsatellite loci: Na–number of alleles, Ho–observed heterozygosity, He–expected heterozygosity and the size range of alleles in base pairs. Data for populations 1–3, 16 and 17 are from [18]. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3648626_d3.v1
title: Additional file 4 of Concordant morphological and molecular clines in a contact zone of the Common and Spined toad (Bufo bufo and B. spinosus) in the northwest of France

description: Appendix IV. SNP data in GenePop format [20]. Populations are in the order 1–17, as in Table 1. (TXT 9 kb)
DOI: 10.6084/m9.figshare.c.3648908_d1.v1
title: Additional file 1: of The Interaction Network Ontology-supported modeling and mining of complex interactions represented with multiple keywords in biomedical literature

description: Interaction keywords and INO type annotations for the LLL data set. This additional file includes annotations of the LLL dataset with INO multiple keyword interaction types. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3648929_d1.v1
title: MOESM4 of Copy number variability of expression plasmids determined by cell sorting and Droplet Digital PCR

description: Additional file 4. This spreadsheet file contains the Droplet Digital PCR dataset presented in this study.
DOI: 10.6084/m9.figshare.c.3648917_d2.v1
title: Additional file 2: Table S1. of Circulating cell-free DNA-based epigenetic assay can detect early breast cancer

description: Characteristics of cell lines used in this study. Table S2. Characteristics of FFPE samples used in methylation array analysis. Table S3. Characteristics of healthy volunteers in methylation array analysis. Table S4. Primer/probe set designed for methylation markers. Table S5. Sequence of primer/probe sets for methylation markers. Table S6. Sequence of primer/probe sets of internal control markers. Table S7. Clinical data of cfDNA samples and results of ddMSP analysis. Table S8. Sensitivity and specificity of the best SVM model. Table S9. Correlation between age and each marker/parameter. Table S10. Summary of recent epigenetic studies regarding cfDNA for BC. Table S11. Upper and lower cutoff threshold of positive droplets. Table S12. Cutoffs of marker concentration to categorize into marker-positive/negative groups. Table S13. P values of statistical tests in the validation analysis using public datasets. (XLSX 172 kb)
DOI: 10.6084/m9.figshare.c.3648926_d2.v1
title: Additional File 1: Table S1.

description: Normalized full metabolic dataset. Table S2. Seed weight in response to salinity for both seasons. Table S3. Putative QTLs for maturation percent. Table S4. Putative QTLs for RMC in SDF. Table S5. Putative QTLs for RMC in SDS. (XLSX 882 kb)
DOI: 10.6084/m9.figshare.c.3648929_d2.v1
title: MOESM2 of Copy number variability of expression plasmids determined by cell sorting and Droplet Digital PCR

description: Additional file 2. This spreadsheet file contains the recommended minimal information for digital PCR experiments.
DOI: 10.6084/m9.figshare.c.3648941_d1.v1
title: Additional file 1: of National Influenza Surveillance in the Philippines from 2006 to 2012: seasonality and circulating strains

description: Data on influenza positivity rates from 2006 to 2011, National Influenza Surveillance Philippines and computation of average epidemic curve and alert threshold. (XLSX 52 kb)
DOI: 10.15468/dl.e9j9ea
title: Occurrence Download

description: A dataset containing 15635 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "Geometry POLYGON((-73.54765 11.28367,-73.76294 11.77704,-74.33704 11.52587,-74.20249 11.26572,-73.54765 11.28367))",
 "StateProvince is one of (magdalena)",
 "TaxonKey is one of (Perciformes)"
 ]
 }
 ]
}

 The dataset includes 15635 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038264-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x43543
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bathyagonus alascanus (Gilbert, 1896)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 14 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038265-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3651818_d4.v1
title: Additional file 4: of A fast exact sequential algorithm for the partial digest problem

description: Supplementary data. Calculation of the Standard Error of Mean (SEM), Coefficient of Variation (CV), and Wilcoxon Signed-Rank test for the memory. Tables S15-S19. in Sheet 1 and 2, represent the calculation of SEM and CV for the memory consumption of BBd, BBb, and BBb2 algorithms in case of random data and Zhang data respectively. Tables S20–S22. in Sheet 3, represents the Wilcoxon Signed-Rank test between BBd and BBb algorithms for the memory consumption of Random and Zhang data. Tables S23–S25. in Sheet 4, represent the Wilcoxon Signed-Rank test between BBb and BBb2 algorithms for the memory consumption of Random and Zhang data. Tables S26-S28. in Sheet 5, represent the Wilcoxon Signed-Rank test between BBd and BBb2 algorithms for the memory consumption of Random and Zhang data. (XLS 167 kb)
DOI: 10.6084/m9.figshare.c.3652385_d1.v1
title: Additional file 3 of Prioritizing biological pathways by recognizing context in time-series gene expression data

description: Ranked list of pathways resulted from TRAP and ContextTRAP. It provided ranking information of whole pathways in TRAP and ContextTRAP. It is mentioned in section Biological perspective with part of pathways whose ranks went up in ContextTRAP. (XLS 71 kb)
DOI: 10.6084/m9.figshare.c.3652400_d1.v1
title: Additional file 1 of Clustering and evolutionary analysis of small RNAs identify regulatory siRNA clusters induced under drought stress in rice

description: The GO (Gene Ontology) enrichment results of genes with siRNA targeting sites. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3652385_d2.v1
title: Additional file 2 of Prioritizing biological pathways by recognizing context in time-series gene expression data

description: Pathway list selected as relevant pathways. It provides list of pathways relevant to each dataset which are selected by DAVID using validated gene sets mentioned in section Data processing and given in Additional file 1. (XLS 29 kb)
DOI: 10.6084/m9.figshare.c.3652385_d3.v1
title: Additional file 1 of Prioritizing biological pathways by recognizing context in time-series gene expression data

description: Criteria of gene selection and selected gene set. It provides how to select the gene sets to find relevant pathways from each dataset and the result of selection mentioned in section Data processing. (XLS 49 kb)
DOI: 10.6084/m9.figshare.c.3652400_d2.v1
title: Additional file 2 of Clustering and evolutionary analysis of small RNAs identify regulatory siRNA clusters induced under drought stress in rice

description: The detected motif sequences in siRNA clusters located in intronic regions. (XLSX 98 kb)
DOI: 10.6084/m9.figshare.c.3656885_d1.v1
title: Additional file 1: Table S1. of Genetic clustering and polymorphism of the merozoite surface protein-3 of Plasmodium knowlesi clinical isolates from Peninsular Malaysia

description: Multiple alignment of full amino acid sequences of pkmsp3. The yellow columns are the variable amino acid positions. The region highlighted in red at the top of the alignment indicates Domain A, and the region in green indicates Domain B. (XLS 389 kb)
DOI: 10.6084/m9.figshare.c.3656885_d1
title: Additional file 1: Table S1. of Genetic clustering and polymorphism of the merozoite surface protein-3 of Plasmodium knowlesi clinical isolates from Peninsular Malaysia

description: Multiple alignment of full amino acid sequences of pkmsp3. The yellow columns are the variable amino acid positions. The region highlighted in red at the top of the alignment indicates Domain A, and the region in green indicates Domain B. (XLS 389 kb)
DOI: 10.15468/dl.5uhzfy
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bathyagonus infraspinatus (Gilbert, 1904)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038266-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3657041_d1.v1
title: Additional file 2: Table S1. of Identification of genes affecting alginate biosynthesis in Pseudomonas fluorescens by screening a transposon insertion library

description: Primers used in the study. (XLS 30 kb)
DOI: 10.6084/m9.figshare.c.3657041_d1
title: Additional file 2: Table S1. of Identification of genes affecting alginate biosynthesis in Pseudomonas fluorescens by screening a transposon insertion library

description: Primers used in the study. (XLS 30 kb)
DOI: 10.6084/m9.figshare.c.3657920_d1
title: Additional file 8: of Small RNA sequencing of cryopreserved semen from single bull revealed altered miRNAs and piRNAs expression between High- and Low-motile sperm populations

description: Novel miRNA mature sequences identified in High Motile (HM) and Low Motile (LM) sperm fractions. (FA 12Â kb)
DOI: 10.6084/m9.figshare.c.3657920_d2.v1
title: Additional file 4: of Small RNA sequencing of cryopreserved semen from single bull revealed altered miRNAs and piRNAs expression between High- and Low-motile sperm populations

description: Details for each piRNA clusters found in Low Motile (LM) sperm fraction. Genes, repeats, transposable elements and transcription factors binding sites falling within the cluster regions were reported. (ZIP 1034Â kb)
DOI: 10.6084/m9.figshare.c.3657920_d2
title: Additional file 4: of Small RNA sequencing of cryopreserved semen from single bull revealed altered miRNAs and piRNAs expression between High- and Low-motile sperm populations

description: Details for each piRNA clusters found in Low Motile (LM) sperm fraction. Genes, repeats, transposable elements and transcription factors binding sites falling within the cluster regions were reported. (ZIP 1034Â kb)
DOI: 10.15468/dl.nf43ea
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bathyagonus nigripinnis Gilbert, 1890",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038267-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18120/j0z6-fx60
title: Immersive Enviornments effects on BCI
DOI: 10.6084/m9.figshare.c.3658916_d1.v1
title: Additional file 3: of Implementation of the WHO multimodal Hand Hygiene Improvement Strategy in a University Hospital in Central Ethiopia

description: Hand hygiene knowledge questionnaire pre and post. (SAV 4 kb)
DOI: 10.6084/m9.figshare.c.3658916_d1
title: Additional file 3: of Implementation of the WHO multimodal Hand Hygiene Improvement Strategy in a University Hospital in Central Ethiopia

description: Hand hygiene knowledge questionnaire pre and post. (SAV 4 kb)
DOI: 10.6084/m9.figshare.c.3658919_d1.v1
title: Additional file 1: Table S1. of Plasma presepsin level is an early diagnostic marker of severe febrile neutropenia in hematologic malignancy patients

description: Plasma presepsin level change over time compared with CRP in FN group (cases 1â  11) and AFN group (cases 12â  15). (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.c.3659078_d2
title: Additional file 1: Table S1. of Complete genome sequence and whole-genome phylogeny of Kosmotoga pacifica type strain SLHLJ1T from an East Pacific hydrothermal sediment

description: List of the core genes chosen for the whole genome phylogenetic analysis. This list is composed of 499 orthologous genes from 20 genomes within the phylum Thermotogae. (XLS 210Â kb)
DOI: 10.6084/m9.figshare.c.3659087_d1
title: Additional file 2: Table S1. of Meta-analysis reveals conserved cell cycle transcriptional network across multiple human cell types

description: Lists of genes included in the clusters. (XLSX 52Â kb)
DOI: 10.6084/m9.figshare.c.3659087_d1.v1
title: Additional file 2: Table S1. of Meta-analysis reveals conserved cell cycle transcriptional network across multiple human cell types

description: Lists of genes included in the clusters. (XLSX 52Â kb)
DOI: 10.6084/m9.figshare.c.3659096_d1.v1
title: Additional file 1: of Competition assays and physiological experiments of soil and phyllosphere yeasts identify Candida subhashii as a novel antagonist of filamentous fungi

description: The average relative growth (four replicates) of all binary competition experiments (16 filamentous fungi in the presence of 40 different yeasts) performed in the course of this study. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3659096_d1
title: Additional file 1: of Competition assays and physiological experiments of soil and phyllosphere yeasts identify Candida subhashii as a novel antagonist of filamentous fungi

description: The average relative growth (four replicates) of all binary competition experiments (16 filamentous fungi in the presence of 40 different yeasts) performed in the course of this study. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3659087_d2.v1
title: Additional file 3: Table S2. of Meta-analysis reveals conserved cell cycle transcriptional network across multiple human cell types

description: GO enrichment analyses of the clusters. (XLSX 1180Â kb)
DOI: 10.6084/m9.figshare.c.3659087_d2
title: Additional file 3: Table S2. of Meta-analysis reveals conserved cell cycle transcriptional network across multiple human cell types

description: GO enrichment analyses of the clusters. (XLSX 1180Â kb)
DOI: 10.6084/m9.figshare.c.3659087_d3.v1
title: Additional file 5: Table S4. of Meta-analysis reveals conserved cell cycle transcriptional network across multiple human cell types

description: Table S4. Annotation of the 39 unreported genes. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3659219_d1
title: Additional file 1: of Prospective cohort study of procalcitonin levels in children with cancer presenting with febrile neutropenia

description: Procalcitonin study data. (XLSX 65 kb)
DOI: 10.15468/dl.6b6jgv
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bathyagonus pentacanthus (Gilbert, 1890)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 100 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038268-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3659189_d6.v1
title: Additional file 7: of Genetic architecture of kernel composition in global sorghum germplasm

description: Significant SNPs associated with protein, fat, and starch. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3659231_d1.v1
title: Additional file 3: of Unsupervised statistical discovery of spaced motifs in prokaryotic genomes

description: Table S3. Summary statistics for each analyzed genome. Description of data: The table contains mean statistics for variable of interests and distribution of spacer length at the genome level in which at least one significant motif pair is detected. (CSV 31 kb)
DOI: 10.6084/m9.figshare.c.3659189_d6
title: Additional file 7: of Genetic architecture of kernel composition in global sorghum germplasm

description: Significant SNPs associated with protein, fat, and starch. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3659231_d1
title: Additional file 3: of Unsupervised statistical discovery of spaced motifs in prokaryotic genomes

description: Table S3. Summary statistics for each analyzed genome. Description of data: The table contains mean statistics for variable of interests and distribution of spacer length at the genome level in which at least one significant motif pair is detected. (CSV 31 kb)
DOI: 10.6084/m9.figshare.c.3659231_d2.v1
title: Additional file 4: of Unsupervised statistical discovery of spaced motifs in prokaryotic genomes

description: Table S4. List of the 30 genomes selected for detailed analysis. Description of data: The table contains the 30 genomes that are selected to investigate in detail in this paper. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3659231_d2
title: Additional file 4: of Unsupervised statistical discovery of spaced motifs in prokaryotic genomes

description: Table S4. List of the 30 genomes selected for detailed analysis. Description of data: The table contains the 30 genomes that are selected to investigate in detail in this paper. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3659189_d8.v1
title: Additional file 8: of Genetic architecture of kernel composition in global sorghum germplasm

description: Expression data for genes under major peaks. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.c.3659228_d2.v1
title: Additional file 3: of Genome-wide analysis of starch metabolism genes in potato (Solanum tuberosum L.)

description: Description of samples analyzed in this study. (XLS 36Â kb)
DOI: 10.6084/m9.figshare.c.3659228_d2
title: Additional file 3: of Genome-wide analysis of starch metabolism genes in potato (Solanum tuberosum L.)

description: Description of samples analyzed in this study. (XLS 36Â kb)
DOI: 10.6084/m9.figshare.c.3659189_d8
title: Additional file 8: of Genetic architecture of kernel composition in global sorghum germplasm

description: Expression data for genes under major peaks. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.c.3659231_d3.v1
title: Additional file 2: of Unsupervised statistical discovery of spaced motifs in prokaryotic genomes

description: Table S2.. Significant motif pairs detected in 569 analyzed genomes. Description of data: The table contains 3326 motif pairs in 569 genomes that identified as significant by our approach. (CSV 300 kb)
DOI: 10.6084/m9.figshare.c.3660314_d1
title: Additional file 1: Table S1. of DNA polymerase kappa protects human cells against MMC-induced genotoxicity through error-free translesion DNA synthesis

description: Primer list. Table S2. Mutation spectra of TK â  /â   mutants. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.c.3660320_d1.v1
title: Additional file 1: Table S1. of Detection of West Nile virus in six mosquito species in synchrony with seroconversion among sentinel chickens in India

description: Nucleotide divergence among WNV Lineage 5 sequences. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3660320_d1
title: Additional file 1: Table S1. of Detection of West Nile virus in six mosquito species in synchrony with seroconversion among sentinel chickens in India

description: Nucleotide divergence among WNV Lineage 5 sequences. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3660332_d1.v1
title: MOESM1 of Salivary TNFÎą levels in groups of subjects with rheumatoid arthritis and chronic periodontitis

description: Additional file 1. Baseline clinical characteristics of the patients.
DOI: 10.6084/m9.figshare.c.3660332_d1
title: MOESM1 of Salivary TNFÎą levels in groups of subjects with rheumatoid arthritis and chronic periodontitis

description: Additional file 1. Baseline clinical characteristics of the patients.
DOI: 10.6084/m9.figshare.c.3660347_d1.v1
title: Additional file 1: of S2O â   A software tool for integrating research data from general purpose statistic software into electronic data capture systems

description: Sample SPSS file. The data contains variables with all possible data types and example cases with values. (SAV 3Â kb)
DOI: 10.6084/m9.figshare.c.3660359_d7.v1
title: Additional file 4: of Overexpression of PaNAC03, a stress induced NAC gene family transcription factor in Norway spruce leads to reduced flavonol biosynthesis and aberrant embryo development

description: Clustal W Alignment of Norway spruce subgroup III-3 NAC proteins. The coloured boxes correspond to the conserved N-terminal motifs A (light blue), B (pale green), C (pale red, D (lilac) and E (pale gold). The shaded residues indicate residues conserved in the C-terminal region. (XLSX 21Â kb)
DOI: 10.6084/m9.figshare.c.3660386_d8.v1
title: Additional file 2: Table S1. of Shotgun proteomics of the barley seed proteome

description: Transmembrane proteins in the barley seed proteome. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3660386_d8
title: Additional file 2: Table S1. of Shotgun proteomics of the barley seed proteome

description: Transmembrane proteins in the barley seed proteome. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3660359_d7
title: Additional file 4: of Overexpression of PaNAC03, a stress induced NAC gene family transcription factor in Norway spruce leads to reduced flavonol biosynthesis and aberrant embryo development

description: Clustal W Alignment of Norway spruce subgroup III-3 NAC proteins. The coloured boxes correspond to the conserved N-terminal motifs A (light blue), B (pale green), C (pale red, D (lilac) and E (pale gold). The shaded residues indicate residues conserved in the C-terminal region. (XLSX 21Â kb)
DOI: 10.6084/m9.figshare.c.3660428_d1.v1
title: Additional file 5: Table S5. of Complete genome sequence of Lutibacter profundi LP1T isolated from an Arctic deep-sea hydrothermal vent system

description: Genes and domains with a potential role in adhesion found in the L. profundi LP1T genome. (XLSX 38 kb)
DOI: 10.15468/dl.2z9uqb
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bathylagus pacificus Gilbert, 1890",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038269-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.