cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1134133.10fu
title: SH1134133.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1134135.10fu
title: SH1134135.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1134137.10fu
title: SH1134137.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1134138.10fu
title: SH1134138.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1134139.10fu
title: SH1134139.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.usz9dq
title: Occurrence Download

description: A dataset containing 24565 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cotoneaster horizontalis Decne.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 24565 records from 435 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013120-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z7c66w
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea trautvetteriana Regel & Schmalh. ex Regel"
 ]
}

 The dataset includes 23 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259967-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3vx9x2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea venusta Iljin"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259971-230224095556074/datasets/export for details.
DOI: 10.15468/dl.mbd773
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gladiolus ×hybridus C.Morren",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038766-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dajcy7
title: Occurrence Download

description: A dataset containing 9737 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elymus hystrix L."
 ]
}

 The dataset includes 9737 records from 205 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251896-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.92w82r
title: Occurrence Download

description: A dataset containing 326644 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Persicaria amphibia (L.) Gray",
 "HasCoordinate is true"
 ]
}

 The dataset includes 326644 records from 942 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041004-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.599je4
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Echeveria coccinea (Cav.) DC."
 ]
}

 The dataset includes 126 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246971-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eezf8j
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea viciosoi Pau"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259972-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7zqj38
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Iberis balansae Jord."
 ]
}

 The dataset includes 66 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251909-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d82y8v
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hieracium sudeticum Sternb.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002841-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85frpa
title: Occurrence Download

description: A dataset containing 1299 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coenogonium linkii Ehrenb.)",
 "Country is Colombia",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1299 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246979-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nvzyj5
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-68.57474 -54.68465,-68.55331 -54.90292,-68.46044 -54.91113,-67.98183 -54.84949,-67.91754 -54.67226,-68.57474 -54.68465))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lycalopex culpaeus (Molina, 1782)",
 "Year 2009-2023"
 ]
}

 The dataset includes 21 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259975-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mj76t9
title: Occurrence Download

description: A dataset containing 7248 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carpinus cordata Blume"
 ]
}

 The dataset includes 7248 records from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251897-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4pxkp
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is NMNH Extant Specimen Records (USNM, US)",
 "TaxonKey is Sycorax Haliday, 1839"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246985-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7cw3f
title: Occurrence Download

description: A dataset containing 16369 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gladiolus italicus Mill.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 16369 records from 317 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038767-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g39wnx
title: Occurrence Download

description: A dataset containing 1779 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Felis chaus Schreber, 1777"
 ]
}

 The dataset includes 1779 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036287-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3600422_d7.v1
title: Additional file 2: Table S2. of Whole-genome transcription and DNA methylation analysis of peripheral blood mononuclear cells identified aberrant gene regulation pathways in systemic lupus erythematosus

description: Downregulated genes in PBMC of SLE patients compared with normal controls by microarray analysis. S2-1 showed the complete list of 550 downregulated genes in SLE. Three group comparisons, SLE (LN− and LN+) vs. NC (S2-2), SLE LN− vs. NC (S2-3), and SLE LN+ vs. NC (S2-4), were performed to identify downregulated genes by fold change (FC) &gt; 1.2 and p
DOI: 10.6084/m9.figshare.c.3600422_d6.v1
title: Additional file 1: Table S1. of Whole-genome transcription and DNA methylation analysis of peripheral blood mononuclear cells identified aberrant gene regulation pathways in systemic lupus erythematosus

description: Upregulated genes in PBMC of SLE patients compared with normal controls by microarray analysis. S1-1 showed the complete list of 552 upregulated genes in SLE. Three group comparisons in gene expression, SLE (LN− and LN+) vs. NC (S1-2), SLE LN− vs. NC (S1-3), and SLE LN+ vs. NC (S1-4), were performed to identify upregulated genes by fold change (FC) &gt; 1.2 and p
DOI: 10.6084/m9.figshare.c.3600422_d5.v1
title: Additional file 4: Table S4. of Whole-genome transcription and DNA methylation analysis of peripheral blood mononuclear cells identified aberrant gene regulation pathways in systemic lupus erythematosus

description: Hypomethylated CpG sites in PBMC of SLE patients comparing normal controls by genome-wide DNA methylation analysis. Three group comparisons, SLE LN+ vs. NC (S4-1), SLE LN− vs. NC (S4-2), and SLE (LN− and LN+) vs. NC (S4-3), were performed to identify hypomethylated CpG sites by fold change (FC) &gt; 1.2 and q value
DOI: 10.6084/m9.figshare.c.3600422_d4.v1
title: Additional file 3: Table S3. of Whole-genome transcription and DNA methylation analysis of peripheral blood mononuclear cells identified aberrant gene regulation pathways in systemic lupus erythematosus

description: Hypermethylated CpG sites in PBMC of SLE patients comparing normal controls by genome-wide DNA methylation analysis. Three group comparisons, SLE LN+ vs. NC (S3-1), SLE LN− vs. NC (S3-2), and SLE (LN− and LN+) vs. NC (S3-3), were performed to identify hypermethylated DNA CpG sites by fold change (FC) &gt; 1.2 and q value
DOI: 10.6084/m9.figshare.c.3600422_d2.v1
title: Additional file 5: Table S5. of Whole-genome transcription and DNA methylation analysis of peripheral blood mononuclear cells identified aberrant gene regulation pathways in systemic lupus erythematosus

description: Hypomethylated or hypermethylated CpG sites associated with the commonly up- or downregulated genes in SLE. S5-1 showed a complete list of 1065 hypomethylated CpG sites that were associated with 333 upregulated genes in SLE, and the normalized Î˛ values of each site for NC and SLE samples. S5-2 showed 3024 hypermethylated CpG sites that were associated with 478 downregulated genes, and the normalized Î˛ values of each site for NC and SLE samples. (XLSX 2264 kb)
DOI: 10.15468/dl.33djzp
title: Occurrence Download

description: A dataset containing 942 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mycaranthes Blume"
 ]
}

 The dataset includes 942 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036288-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jryqbp
title: Occurrence Download

description: A dataset containing 397 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pleuronichthys cornutus (Temminck & Schlegel, 1846)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 397 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036290-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cs742h
title: Occurrence Download

description: A dataset containing 74377 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phoxinus Rafinesque, 1820, Dyspanopeus sayi (Smith, 1869), Orconectes limosus (Rafinesque, 1817), Pseudotsuga menziesii (Mirb.) Franco, Fundulus heteroclitus (Linnaeus, 1766), Callinectes sapidus Rathbun, 1896, Trachemys scripta scripta, Phoxinus septimaniae Kottelat, 2007, Batrachochytrium dendrobatidis Longcore, Pessier & D.K.Nichols, Salmo trutta Linnaeus, 1758, Pacifastacus leniusculus (Dana, 1852), Phoxinus bigerri Kottelat, 2007, Oncorhynchus mykiss (Walbaum, 1792), Silurus glanis Linnaeus, 1758, Misgurnus anguillicaudatus (Cantor, 1842), Carassius auratus (Linnaeus, 1758), Trachemys scripta (Thunberg In Schoepff, 1792), Gambusia holbrooki Girard, 1859, Senecio inaequidens DC., Trachemys scripta elegans (Wied, 1838), Dreissena polymorpha (Pallas, 1771), Cyprinus carpio Linnaeus, 1758, Procambarus clarkii (Girard, 1852), Neovison vison (Schreber, 1777))",
 "HasCoordinate is true",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 {
 "not" : {
 "BasisOfRecord" : [
 "is Living Specimen"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "not" : {
 "DatasetKey" : [
 "is iNaturalist Research-grade Observations"
 ]
 }
 },
 {
 "not" : {
 "DatasetKey" : [
 "is \"Flora of Russia\" on iNaturalist: a trusted backlog"
 ]
 }
 },
 {
 "not" : {
 "DatasetKey" : [
 "is Pl@ntNet automatically identified occurrences"
 ]
 }
 },
 {
 "not" : {
 "DatasetKey" : [
 "is Pl@ntNet observations"
 ]
 }
 },
 "Geometry POLYGON ((0.41748 40.446947, 1.043701 40.697299, 1.07666 41.004775, 2.219238 41.261291, 3.284912 41.836828, 3.240967 42.544987, 0.516357 42.932296, 0.527344 42.024814, 0.076904 40.971604, 0.131836 40.555548, 0.41748 40.446947))"
 ]
}

 The dataset includes 74377 records from 167 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036283-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3600290_d13.v1
title: Additional file 6: Table S5. of Gene expression profile indicates involvement of NO in Camellia sinensis pollen tube growth at low temperature

description: GO classification of DEGs identified from the comparison between control (CK) and NO-treated (NO) pollen tubes. (XLS 40 kb)
DOI: 10.6084/m9.figshare.c.3600311_d5.v1
title: Additional file 4: of Liver transcriptome response to hyperthermic stress in three distinct chicken lines

description: List of shared differentially expresses genes among 3 genetic lines (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3600290_d10.v1
title: Additional file 5: Table S4. of Gene expression profile indicates involvement of NO in Camellia sinensis pollen tube growth at low temperature

description: GO classification of DEGs identified from the comparison between control (CK) and 4Â Â°C-treated (LT) pollen tubes. (XLS 52 kb)
DOI: 10.6084/m9.figshare.c.3600290_d8.v1
title: Additional file 7: Table S6. of Gene expression profile indicates involvement of NO in Camellia sinensis pollen tube growth at low temperature

description: GO classification of DEGs identified from the comparison between pollen tubes exposed to 4Â Â°C (LT) and pollen tubes treated with NO donor (NO). (XLS 59 kb)
DOI: 10.6084/m9.figshare.c.3600299_d6.v1
title: MOESM2 of Differential urinary glycoproteome analysis of type 2 diabetic nephropathy using 2D-LCâ  MS/MS and iTRAQ quantification

description: Additional file 2. The iBAQ value and N-linked glycoprotein annotation of all identifications.
DOI: 10.6084/m9.figshare.c.3600299_d5.v1
title: MOESM4 of Differential urinary glycoproteome analysis of type 2 diabetic nephropathy using 2D-LCâ  MS/MS and iTRAQ quantification

description: Additional file 4. Differential proteins in normalbuminuria, microalbuminuria, macroalbuminuria. The Cluster classification of each proteins were shown.
DOI: 10.6084/m9.figshare.c.3600290_d6.v1
title: Additional file 4: Table S3. of Gene expression profile indicates involvement of NO in Camellia sinensis pollen tube growth at low temperature

description: DEGs identified from the comparison between 4 °C- (CsPT-LT) and NO-treated (CsPT-NO) pollen tubes. All of the samples were replicated three times. LT and NO FPKM: fragments per kb per million reads for each unigene in the LT and NO libraries, respectively. The log2Ratio (LT/NO): ratio between the FPKM of LT and CK. The absolute values of log2Ratio &gt; 1 and probability &gt; 0.7 were used as threshold for assigning significance. Annotation of DEGs against NR, NT, Swiss-Prot protein, KEGG, COG and GO were all reported in the tables. “-”: no hit. (XLS 451 kb)
DOI: 10.6084/m9.figshare.c.3600299_d4.v1
title: MOESM6 of Differential urinary glycoproteome analysis of type 2 diabetic nephropathy using 2D-LCâ  MS/MS and iTRAQ quantification

description: Additional file 6. The differential protein lists in DM and DN from previous studies.
DOI: 10.6084/m9.figshare.c.3600299_d3.v1
title: MOESM5 of Differential urinary glycoproteome analysis of type 2 diabetic nephropathy using 2D-LCâ  MS/MS and iTRAQ quantification

description: Additional file 5. Detail protein list classified by biological functions by IPA in normalbuminuria, microalbuminuria and macroalbuminuria.