cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4121/19410773
title: Mode partitioning method implemented with BK criteria

description: The mode partitioning method predicts the mode ratio of a mixed mode interface fracture characterization test for which the mode ratio cannot be determined directly. This repository contains data generated while implementing the mode partitioning method with the BK criteria presented in section 4.2 on <b>MPM With Power-law vs. BK Criteria </b>from master thesis titled <b>FINITE ELEMENT MODEL FOR INTERFACES IN COMPATIBILIZED POLYMER BLENDS </b>(http://resolver.tudelft.nl/uuid:88140513-120d-4a34-b893-b84908fe2373).<br>
DOI: 10.4121/15040701.v1
title: Analyzing Candida albicans enolase with MAbs

description: Here we investigate these features in extract peptone dextrose (YPD) medium using a pair of monoclonal antibodies which were validated by Western blot, and LC MS/MS. CaEno abundantly presented in the cytosol distributing in a ring-shaped pattern along the cell wall;Surface display of CaEno was confirmed by whole cell ELISA and flow cytometry. Further laser confocal microscopy analysis revealed that the presence of the surface-located CaEno maintained stable during the culture.DAS-ELISA indicated that CaEno in the supernatant was gradually increased during culture and reached a maximum at 48 h and then the concentration remained stable until 120 h.
DOI: 10.4121/19323839.v1
title: Dataset for Basic Promotors Impact Thermodynamics and Catalyst Speciation in Homogeneous Carbonyl Hydrogenation

description: This dataset contains: - raw NMR data for new compounds used in the publication - comutational data for calculations presented in the published work - raw analytical data for catalysis run characterization - crysallographic data for new complexes
DOI: 10.4121/15040701.v2
title: Analyzing Candida albicans enolase with MAbs

description: Here we investigate the features of CaEno in extract peptone dextrose (YPD) medium using a pair of monoclonal antibodies which were validated by Western blot, and LC MS/MS. <br>
DOI: 10.4121/15040701.v3
title: Investigation of the location and secretion features of Candida albicans enolase with monoclonal antibodies

description: The glycolytic enzyme enolase plays important role in the pathogenesis of <em>Candida albicans </em>infection, and has been also considered as a promising molecular marker for the diagnosis of invasive candidiasis. This study aimed to investigate the location and secretion features of <em>Candida</em> <em>albicans</em> enolase (CaEno) with a couple of specific monoclonal antibodies (mAbs). <br>
DOI: 10.4121/15040701
title: Investigation of the location and secretion features of Candida albicans enolase with monoclonal antibodies

description: The glycolytic enzyme enolase plays important role in the pathogenesis of <em>Candida albicans </em>infection, and has been also considered as a promising molecular marker for the diagnosis of invasive candidiasis. This study aimed to investigate the location and secretion features of <em>Candida</em> <em>albicans</em> enolase (CaEno) with a couple of specific monoclonal antibodies (mAbs). <br>
DOI: 10.4121/19152662.v1
title: Data Underlying the research of Gurmeet Singh [CD4 Bronchoalveolar Lavage Fluid Is Associated with Extubation Failure and Mortality in Critically Ill COVID-19 Pneumonia].xlsx

description: The data here is only for research paper validation of principal investigator / corresponding author Gurmeet Singh entitled: CD4 Bronchoalveolar Lavage Fluid Is Associated with Extubation Failure and Mortality in Critically Ill COVID-19 Pneumonia. The data consists of patients' clinical characteristics, lab profiles, and bronchoalveolar lavage fluid specimen results.
DOI: 10.4121/19152662.v2
title: Data Underlying the research of Gurmeet Singh, research article entitled:"Low Balf CD4 T Cells Count is Associated with Extubation Failure and Mortality In Critically ill Covid-19 Pneumonia"

description: The data here is only for research paper validation of principal investigator / corresponding author Gurmeet Singh entitled: LOW BALF CD4 T CELLS COUNT IS ASSOCIATED WITH EXTUBATION FAILURE AND MORTALITY IN CRITICALLY ILL COVID-19 PNEUMONIA. The data consists of patients' clinical characteristics, laboratory profiles, and bronchoalveolar lavage fluid specimen results.
DOI: 10.4121/19152662.v3
title: Data Underlying the research of Gurmeet Singh, research article entitled:"Low Balf CD4 T Cells Count is Associated with Extubation Failure and Mortality In Critically ill Covid-19 Pneumonia"

description: The data here is only for research paper validation of principal investigator / corresponding author Gurmeet Singh entitled: LOW BALF CD4 T CELLS COUNT IS ASSOCIATED WITH EXTUBATION FAILURE AND MORTALITY IN CRITICALLY ILL COVID-19 PNEUMONIA. The data consists of patients' clinical characteristics, laboratory profiles, and bronchoalveolar lavage fluid specimen results.
DOI: 10.4121/19152662
title: Data Underlying the research of Gurmeet Singh, research article entitled:"Low Balf CD4 T Cells Count is Associated with Extubation Failure and Mortality In Critically ill Covid-19 Pneumonia"

description: The data here is only for research paper validation of principal investigator / corresponding author Gurmeet Singh entitled: LOW BALF CD4 T CELLS COUNT IS ASSOCIATED WITH EXTUBATION FAILURE AND MORTALITY IN CRITICALLY ILL COVID-19 PNEUMONIA. The data consists of patients' clinical characteristics, laboratory profiles, and bronchoalveolar lavage fluid specimen results.
DOI: 10.4121/19572238.v1
title: Data underlying the article: Crack barriers for thick SiN using dicing in Optics Express

description: Data underlying the article Crack barriers for thick SiN using dicing in Optics Express. The text files contain the transmission data (transmitted power as a function of wavelength. The Python script takes this input and creates the graphs in the paper by indentifying mode families and analysing the width of the transmission peaks to calculate the losses
DOI: 10.4121/19572238
title: Data underlying the article: Crack barriers for thick SiN using dicing in Optics Express

description: Data underlying the article Crack barriers for thick SiN using dicing in Optics Express. The text files contain the transmission data (transmitted power as a function of wavelength. The Python script takes this input and creates the graphs in the paper by indentifying mode families and analysing the width of the transmission peaks to calculate the losses
DOI: 10.4121/16923358
title: Data from: Dating basal peat: The geochronology of peat initiation revisited

description: Attributing the start of peat growth to an absolute timescale requires dating the bottom of peat deposits overlying mineral sediment, often called the <em>basal peat</em>. Peat initiation is reflected in the stratigraphy as a gradual transition from mineral sediment to increasingly organic material, up to where it is called peat. So far, varying criteria have been used to define basal peat, resulting in divergent approaches to date peat initiation. The lack of a universally applicable and quantitative definition, combined with multiple concerns that have been raised previously regarding the radiocarbon dating of peat, may result in apparent ages that are either too old or too young for the timing of peat initiation. Here, we aim to formulate updated recommendations for dating peat initiation. We provide a conceptual framework that supports the use of the organic matter (OM) gradient for a quantitative and reproducible definition of the mineral-to-peat transition (i.e., the stratigraphical range reflecting the timespan of the peat initiation process) and the layer defined as <em>basal peat</em> (i.e., the stratigraphical layer that is defined as the bottom of a peat deposit). Selection of dating samples is often challenging due to poor preservation of plant macrofossils in basal peat, and the representativity of humic and humin dates for the age of basal peat is uncertain. We therefore analyse the mineral-to-peat transition based on three highly detailed sequences of radiocarbon dates, including dates of plant macrofossils and the humic and humin fractions obtained from bulk samples. Our case study peatland in the Netherlands currently harbours a bog vegetation, but biostratigraphical analyses show that during peat initiation the vegetation was mesotrophic. Results show that plant macrofossils provide the most accurate age in the mineral-to-peat transition and are therefore recommendable to use for 14C dating basal peat. If these are unattainable, the humic fraction provides the best alternative and is interpreted as a terminus-ante-quem for peat initiation. The potential large age difference between dates of plant macrofossils and humic or humin dates (up to ~1700 years between macrofossil and humic ages, and with even larger differences for humins) suggests that studies reusing existing bulk dates of basal peat should take great care in data interpretation. The potentially long timespan of the peat initiation process (with medians of ~1000, ~1300 and ~1500 years within our case study peatland) demonstrates that choices regarding sampling size and resolution need to be well substantiated. We summarise our findings as a set of recommendations for dating basal peats, and advocate the widespread use of OM determination to obtain a low-cost, quantitative and reproducible definition of <em>basal peat</em> that eases intercomparison of studies.
DOI: 10.4121/16923358.v1
title: Data from: Dating basal peat: The geochronology of peat initiation revisited

description: Attributing the start of peat growth to an absolute timescale requires dating the bottom of peat deposits overlying mineral sediment, often called the <em>basal peat</em>. Peat initiation is reflected in the stratigraphy as a gradual transition from mineral sediment to increasingly organic material, up to where it is called peat. So far, varying criteria have been used to define basal peat, resulting in divergent approaches to date peat initiation. The lack of a universally applicable and quantitative definition, combined with multiple concerns that have been raised previously regarding the radiocarbon dating of peat, may result in apparent ages that are either too old or too young for the timing of peat initiation. Here, we aim to formulate updated recommendations for dating peat initiation. We provide a conceptual framework that supports the use of the organic matter (OM) gradient for a quantitative and reproducible definition of the mineral-to-peat transition (i.e., the stratigraphical range reflecting the timespan of the peat initiation process) and the layer defined as <em>basal peat</em> (i.e., the stratigraphical layer that is defined as the bottom of a peat deposit). Selection of dating samples is often challenging due to poor preservation of plant macrofossils in basal peat, and the representativity of humic and humin dates for the age of basal peat is uncertain. We therefore analyse the mineral-to-peat transition based on three highly detailed sequences of radiocarbon dates, including dates of plant macrofossils and the humic and humin fractions obtained from bulk samples. Our case study peatland in the Netherlands currently harbours a bog vegetation, but biostratigraphical analyses show that during peat initiation the vegetation was mesotrophic. Results show that plant macrofossils provide the most accurate age in the mineral-to-peat transition and are therefore recommendable to use for 14C dating basal peat. If these are unattainable, the humic fraction provides the best alternative and is interpreted as a terminus-ante-quem for peat initiation. The potential large age difference between dates of plant macrofossils and humic or humin dates (up to ~1700 years between macrofossil and humic ages, and with even larger differences for humins) suggests that studies reusing existing bulk dates of basal peat should take great care in data interpretation. The potentially long timespan of the peat initiation process (with medians of ~1000, ~1300 and ~1500 years within our case study peatland) demonstrates that choices regarding sampling size and resolution need to be well substantiated. We summarise our findings as a set of recommendations for dating basal peats, and advocate the widespread use of OM determination to obtain a low-cost, quantitative and reproducible definition of <em>basal peat</em> that eases intercomparison of studies.
DOI: 10.4121/17198453
title: Data simulation of genomic information of two chromosomes of 3-way crossbred pigs

description: Simulated SNP genotype data for 3-way crossbred animals and their purebred ancestors, mimicking chromosomes 1 and 18 of the pig genome. Parental lines are closely related, distantly related or unrelated to each other. For each dataset, 10 replicates are available.
DOI: 10.4121/17198453.v1
title: Data simulation of genomic information of two chromosomes of 3-way crossbred pigs

description: Simulated SNP genotype data for 3-way crossbred animals and their purebred ancestors, mimicking chromosomes 1 and 18 of the pig genome. Parental lines are closely related, distantly related or unrelated to each other. For each dataset, 10 replicates are available.
DOI: 10.4121/19537258.v1
title: Transcriptomic analysis of human bronchial epithelium reveals unique immune landscape in severe asthma

description: Airway epithelial transcriptome analysis of severe asthma (SA) patients was used to identify the immune infiltration mechanisms that affect asthma exacerbation, which may contribute to improving asthma therapy. A serises of bioinformatics methods were utilized to identify the hub genes and signaling pathways in SA.
DOI: 10.4121/19537258
title: Transcriptomic analysis of human bronchial epithelium reveals unique immune landscape in severe asthma

description: Airway epithelial transcriptome analysis of severe asthma (SA) patients was used to identify the immune infiltration mechanisms that affect asthma exacerbation, which may contribute to improving asthma therapy. A serises of bioinformatics methods were utilized to identify the hub genes and signaling pathways in SA.
DOI: 10.4121/19487195
title: Sonar Ping360 rosbag data files. Recorded at TU Delft 3ME pond on 25-03-2022

description: Sonar data recored in rosbag format using ROS. Recordings were performed using a BlueROV2 robot equipped with PIng360 sonar. <br> ROS setup: - ROS Kinetic - Ping360 sonar ROS packaged: ttps://github.com/CentraleNantesRobotics/ping360_sonar/tree/aa48eb6e5ae2650e5cf1d270e0fe4ce8fb3c8b0f <br> Data was recorded at TU Delft 3me pond 25-03-2022. This data will be used in the activities of REMARO (https://remaro.eu/) project. <br>
DOI: 10.4121/19487222
title: BlueROV sonar data and camera images recorded at De Salamander windmill on 28-03-2022

description: Underwater sonar data and camera images recored in rosbag format using ROS. Recordings were performed using a BlueROV2 robot equipped with PIng360 sonar and standard camera. ROS setup: - ROS Kinetic - Ping360 sonar ROS packaged: ttps://github.com/CentraleNantesRobotics/ping360_sonar/tree/aa48eb6e5ae2650e5cf1d270e0fe4ce8fb3c8b0f <br> Morning data: default BlueROV2 configuration Afternoon data: BlueROV2 customized as represented in figure 'bluerov_customized.jpg' in afternoon zip file <br> Data was recorded at De Salamander windmill on 28-03-2022. This data will be used in the activities of REMARO (https://remaro.eu/) project. <br>
DOI: 10.4121/19181597.v1
title: Supporting information to derive the figures of the paper: "Wafer-scale low-disorder 2DEG in 28Si/SiGe without an epitaxial Si cap"

description: The data sets provide the necessary information to derive the figures of the paper "Wafer-scale low-disorder 2DEG in 28Si/SiGe without an epitaxial Si cap" Preprint at https://arxiv.org/abs/2202.08090
DOI: 10.4121/19181597
title: Supporting information to derive the figures of the paper: "Wafer-scale low-disorder 2DEG in 28Si/SiGe without an epitaxial Si cap"

description: The data sets provide the necessary information to derive the figures of the paper "Wafer-scale low-disorder 2DEG in 28Si/SiGe without an epitaxial Si cap" Preprint at https://arxiv.org/abs/2202.08090
DOI: 10.4121/19524619.v1
title: Dataset for "Selective Dimerization of Ethene to 2-Butene on Zn²⁺-Modified ZSM-5 Zeolite"

description: The archive contains optimized geometries (in .xyz format) of the structures used in the paper "Selective Dimerization of Ethene to 2-Butene on Zn²⁺-Modified ZSM-5 Zeolite" <br> The names of the .xyz files follow those used in the paper.
DOI: 10.4121/19583368
title: Green and blue water footprint per unit of wood (1997-2015)

description: Green and blue water footprint per unit of wood (1997-2015) provided as a raster (30 x 30 arc minutes) and as a table with country-average values. The data represents the forest evaporation attributed to roundwood production and distinguishes between the evaporation of green water (direct evaporation of precipitation from the soil and vegetation) and blue water (evaporation of groundwater taken up by the roots of vegetation through capillary rise). See README.txt for full metadata and citation details.
DOI: 10.4121/19524619
title: Dataset for "Selective Dimerization of Ethene to 2-Butene on Zn²⁺-Modified ZSM-5 Zeolite"

description: The archive contains optimized geometries (in .xyz format) of the structures used in the paper "Selective Dimerization of Ethene to 2-Butene on Zn²⁺-Modified ZSM-5 Zeolite" <br> The names of the .xyz files follow those used in the paper.
DOI: 10.4121/19580806.v1
title: AmsterTime: A Visual Place Recognition Benchmark Dataset for Severe Domain Shift

description: AmsterTime: a challenging dataset to benchmark visual place recognition (VPR) in presence of a severe domain shift. AmsterTime dataset offers a collection of 2,500 well-curated images matching the same scene from a street view matched to historical archival image data from Amsterdam city. The image pairs capture the same place with different cameras, viewpoints, and appearances. Unlike existing benchmark datasets, AmsterTime is directly crowdsourced in a GIS navigation platform (Mapillary). Various baselines, including non-learning, supervised and self-supervised methods, pre-trained on different relevant datasets, for both verification and retrieval tasks are evaluated. The result credits the best accuracy to the ResNet-101 model pre-trained on the Landmarks dataset for both verification and retrieval tasks by 84% and 24%, respectively. Additionally, a subset of Amsterdam landmarks is collected for feature evaluation in a classification task. Classification labels are further used to extract the visual explanations using Grad-CAM for inspection of the learned similar visuals in a deep metric learning models.
DOI: 10.4121/16570398
title: Supplementary data for Humidity changes and possible forcing mechanisms over the last millennium in arid Central Asia

description: A continuous high-resolution humidity history in arid Central Asia over the past millennium based on the ~1.8-year high-resolution multiproxy records from Lake Dalongchi in the central Tianshan Mountains.
DOI: 10.4121/19582762.v1
title: Data underlying the H2020 Zerobrine Pilot project

description: Results of Pilots from H2020 project Zerobrine, technical reports to be found on zerobrine.eu
DOI: 10.4121/19582762
title: Data underlying the H2020 Zerobrine Pilot project

description: Results of Pilots from H2020 project Zerobrine, technical reports to be found on zerobrine.eu
DOI: 10.4121/14754999.v1
title: EUFF 2.0 (European Flood Fatalities database)

description: EUFF 2.0 (EUropean Flood Fatalities) is a database which contains 2.875 cases of flood fatalities that occurred throughout 41 years (1980–2020) in 12 study areas in Europe (Cyprus; Czech Republic; Germany; Greece; Israel; Italy; Portugal; Turkey; United Kingdom; the Spanish regions of Balearic Islands and Catalonia, and the Mediterranean regions of South France). EUFF 2.0 provides not only the number of fatalities, but also detailed information about the profile of victims and the circumstances of the accidents. Flood fatality cases are georeferenced using NUTS 3 level (Nomenclature of Territorial Units for Statistics), allowing analyses of fatality distribution in respect to geographic and demographic data.
DOI: 10.4121/uuid:3ac47b36-12ce-4c38-97d5-5bbf7d20572d
title: EUropean Flood Fatalities (EUFF) database 1980-2018

description: This dataset, named EUFF (EUropean Flood Fatalities) collects data about flood mortality (2466 cases) occurred during a 39-year period (1980-2018) in 8 countries divided into 9 study areas (Czech Republic, Israel, Italy, Turkey, Greece, Portugal, South France, Catalonia and Balearic Islands). The methodological approach to gather data was based on the systematic collection of fatal events descriptions from documentary sources and the disaggregation and systematization of all the available information into the database. Narratives of fatal events gathered from documentary sources were disaggregated in database fields describing victim’s profile and the circumstances of the deaths; each row contains data related to a single fatality, organized in fields with informations about event (place, date, hour), victim (age, gender, conditions, residency, activity), and victim-event interactions (accident place, accident dynamic, death causes, protective and/or hazardous behaviours). EUFF database represents a unique source of data for the study of flood victims with a broad potential for further spatial and temporal extension for different use.
DOI: 10.4121/19526083.v1
title: Data related to the Master thesis: Stability of closed granular filters under wave loading

description: RESEARCH INFORMATION: Starting in the 1930’s, many research projects have been performed with the intent to establish rules, which can be used to design granular, geometrically closed filter structures for hydraulic structures. However, for the vast majority of these research projects, the filter structure was loaded by uniform flow, either in the parallel or perpendicular direction. This means that, while for filters under flow loading multiple design options and diagrams are available, the knowledge on design rules for sloped, closed filters under wave loading remained limited. These knowledge gaps mean that, in design practice, often the design criteria for closed filters under flow loading, for instance the original criterion by Terzaghi, are used for the design of closed filters under wave loading, while these have not yet been experimentally verified for this use case.<br> <br> This thesis combines model test results from two historically performed experiment programs on sloped, closed granular filters under wave loading with new experiments, which were conducted especially for this thesis. By analyzing the results from these three research projects, commonly used interface stability criteria for closed granular filters are tested for use in the case of a sloped, closed granular filter under wave loading. Afterwards, a new interface stability criterion for sloped, closed granular filters under wave loading is proposed.