cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/4km8rgwwpk.1
title: Protection of the endothelium and endothelial glycocalyx by hydrogen against ischemia-reperfusion injury in a porcine model of cardiac arrest

description: Hydrogen is a potent antioxidant agent that can easily be administered by inhalation. The aim of the study was to evaluate whether hydrogen protects the glycocalyx layer after successful cardiopulmonary resuscitation (CPR). Fourteen anesthetized piglets underwent CPR after induced ventricular fibrillation. During CPR and return of spontaneous circulation, 2% hydrogen gas was administered to seven pigs (hydrogen group) and seven constituted a control group. Biochemistry and sublingual microcirculation were assessed at baseline, during CPR, at the 15th, 30th, 60th, and 120th minute. All seven subjects from the hydrogen group and six subjects in the control group were resuscitated after 6–10 minutes. At baseline, there were no statistically significant differences in examined variables. After the CPR, blood pH, base excess, and lactate showed significantly smaller derangement in the hydrogen group than in the control group. By contrast, plasma syndecan-1 and the variables in sublingual microcirculation did not change after the CPR; here, the measured values were virtually identical between the groups. In pigs, hydrogen gas inhalation during CPR and post-resuscitation care was associated with less pronounced metabolic acidosis than in controls. However, we could not find evidence of injury to the endothelium or glycocalyx in any studied groups.
DOI: 10.17632/zzgw9t9jsy.1
title: Evaluation of dry eye severity and ocular surface inflammation in patients with pemphigus and pemphigoid

description: A total of 22 patients (15 pemphigus and 7 pemphigoids) and 21 non-diseased controls were enrolled in our study. All participants underwent ocular surface evaluation, which included ocular surface disease index (OSDI) test, slit lamp observation, dry eye-related examination, tear multicytokine analysis, and conjunctival impression cytology
DOI: 10.17632/rjwvx8zfby.2
title: Data for Unlocking the Potential of the 3-Hydroxykynurenine/Kynurenic Acid Ratio: A Promising Biomarker in Adolescent Major Depressive Disorder

description: Contents
1, An SPSS Statistics aata document contains the Children's Depression Inventory scores, groups and serum levels of metabolites (μg/L) and others. 
2, A zip file contains figures and LC/MS-MS method information from a sample. 
Figure 001. The total ion chromatograms (TIC) 
Figure 002 and figure 006. The typical extracted ion chromatograms of 3-hydroxy-kynurenine and its isotope-labeled standard.
Figure 003. The typical extracted ion chromatograms of kynurenine.
Figure 004 and figure 007. The typical extracted ion chromatograms of tryptophan and its isotope-labeled standard.
Figure 005 and figure 008. The typical extracted ion chromatograms of kynurenic acid and its isotope-labeled standard.
DOI: 10.17632/tkj8949mkb.1
title: Preoperative circulating endothelial cells and endothelial progenitor cells are not associated with Fontan outcomes

description: Preoperative circulating endothelial cells and endothelial progenitor cells are not associated with Fontan outcomes
DOI: 10.17632/n94cmzk8pt.1
title: LINF_330023000

description: RNA-binding protein | RBP7A; Leishmania infantum (strain JPCM5)
DOI: 10.17632/x8xyhyc5p9.1
title: LINF_330022400

description: Guanine nucleotide-binding protein subunit beta; Leishmania infantum (strain JPCM5)
DOI: 10.17632/mmjs9s9k43.1
title: LDHU3_09.1580

description: Mitochondrial carrier protein | MCP21; Leishmania donovani (HU3 strain)
DOI: 10.17632/p7rc5pp6gb.1
title: Martin Lake isotope geochemistry and sedimentology

description: This dataset contains oxygen and carbon isotope ratios preserved in sediment cores recovered from Martin Lake, Indiana, USA. Also included is a record of variability in the clastic/lithic fraction of the same sediments. These data span approximately the past 7,000 years.
DOI: 10.17632/m2gnp7j7cn.1
title: ESTIMATION OF XCO2 IN RICE AND SUGARCANE CROPS WITH AN ENSEMBLE OF WOFOST AND RANDOM FOREST

description: This is the data used to develop the research entitled: "ESTIMATION OF XCO2 IN RICE AND SUGARCANE CROPS WITH AN ENSEMBLE OF WOFOST AND RANDOM FOREST", made available for scientific community.
DOI: 10.17632/xy56ww6j82.1
title: LINF_330027800

description: SND3-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/7mt9cf89ws.1
title: Dataset: Composition of Ichthyocarbonate and Associated Organic Coatings

description: The datasets available here include measurements of dissolution rate on natural and bleach-treated ichthyocarbonate produced by the Gulf toadfish (Opsanus beta) and the Olive flounder (Paralichthys olivaceus) reported in the first tab. In addition, a second tab reports the C/N ratios and stable carbon isotope values of organic matter associated with ichthyocarbonate produced by the Gulf toadfish and Olive flounder. Stable carbon isotope values of organic matter associated with ichthyocarbonate produced by the Gulf toadfish were previously reported in Oehlert et al., (2024), but reported again here to enable statistical comparison between the composition of ichthyocarbonate produced by different species. Finally, volumetric analyses of carbonate and organic matter associated with ichthyocarbonate assessed via microCT analyses are presented in the third tab of this dataset. 

References:
Oehlert, A.M., Garza, J., Nixon, S., Frank, L., Folkerts, E.J., Heuer, R.M., Benetti, D.D., del Campo, J., Gomez, F., Grosell, M. (2024). Implications of dietary carbon incorporation in fish carbonates for the global carbon cycle. Science of the Total Environment, 916, 169895.
DOI: 10.17632/p7rc5pp6gb.2
title: Martin Lake isotope geochemistry and sedimentology

description: This dataset contains oxygen and carbon isotope ratios preserved in sediment cores recovered from Martin Lake, Indiana, USA. Also included is a record of variability in the clastic/lithic fraction of the same sediments. These data span approximately the past 7,000 years.
DOI: 10.17632/dr87fk9gxh.1
title: LDHU3_09.1600

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/4zvry42ndt.1
title: PRESSURE MAPPING AND SUSCEPTIBILITY TO BONDING FAILURE FOR LOW-QUALITY LAMSTOCK IN CROSS LAMINATED TIMBER

description: Research data associated with experiments performed at Washington State University for delamination and shear tests for low quality lumber.
DOI: 10.17632/x6x969swzz.1
title: LINF_330029800

description: Copper-transporting ATPase | ATP7; Leishmania infantum (strain JPCM5)
DOI: 10.17632/f6p2kfr2d7.1
title: LINF_330029500

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/sk24d2j8dm.1
title: LDHU3_17.2170

description: Ferrochelatase | FeCH; Leishmania donovani (HU3 strain)
DOI: 10.17632/26hch5pzym.1
title: Research-Paper-Energy&Fuels

description: X-Y data for the Figures in the research paper for Energy and Fuels Journal.
DOI: 10.17632/67zdtdz62r.1
title: Tabaconomía Bolivia

description: This dataset contains images of cigarette packs collected during a field survey in Bolivia to analyze their origin and verify compliance with the Ministry of Health regulations. The photos show all sides of each pack, including official health warning pictograms and import stickers where applicable. This dataset is relevant for regulatory compliance.
DOI: 10.17632/dsd985v37t.1
title: Usability Evaluation a Comparative Study in Ecuador, Indonesia, and Lebanon

description: Usability Evaluation of a Mobile Augmented Reality App for PC Hardware Training: A Comparative Study in Ecuador, Indonesia, and Lebanon. The proliferation of mobile applications for educational purposes has highlighted the need to evaluate their usability, especially in diverse international contexts. This study addresses the problem of insufficient engagement and effectiveness of educational tools related to PC hardware training, a problem exacerbated by cultural and contextual differences between regions. Understanding the importance of this issue is crucial, as effective educational tools can improve learning outcomes and accessibility on a global scale. Previous research has explored various educational technologies, but often failed to comprehensively address usability across different cultural contexts, limiting the generalization and impact of the results. This gap underscores the need for robust evaluation of educational applications in diverse populations. In this context, our research proposes the analysis of Build_PC, a mobile augmented reality (AR) application designed to teach PC hardware, using the IBM Computer System Usability Questionnaire (CSUQ) to assess user satisfaction. This study was conducted in three countries—Ecuador, Indonesia, and Lebanon—covering a variety of cultural and educational settings. The results indicate remarkably high levels of user satisfaction with the AR application across the three participating universities. Positive feedback suggests that the application effectively engages students and improves their understanding of PC hardware training, regardless of regional differences. The implications of these findings are significant, as they suggest that augmented reality applications may be a viable solution for overcoming educational barriers related to PC hardware training on an international scale. This study highlights the potential of such technology to enhance educational outcomes and provides a framework for future research in the global deployment of educational technologies.
DOI: 10.17632/28cwwt37jg.1
title: Biological durability of cross-laminated timber connections

description: This dataset contains raw and processed data of mechanical tests performed on four species of cross-laminated timber (CLT) exposed to biodeterioration by two brown rot fungi (Gloeophyllum trabeum (Pers.: Fr.) Murr. (isolate # Madison 617) and Rhodonia placenta (Fr) Niemela, Larss, and Schagel (Isolate No. Mad 698).). Cyclic tests, with 10 replicates per test series, were conducted on decayed connection assemblies after 0, 10, 20 , 30, 40, 52 and 78 weeks. Dowel bearing tests, with seven replicates per test series, were conducted for small samples harvested from the undamaged portion of the connection assemblies from the cyclic tests. The dowel bearing tests were only conducted for three CLT species and examined for only up to 40 weeks of biodeterioration. Mass loss due to fungal action data from all cyclic tests was recorded. Additionally, Seismic Analysis of Wood frame Shear walls (SAWS) model parameters, which were developed for the cyclic tests through the first 40 weeks of fungal exposure, are included. In summary, the raw dataset contains load-displacement data collected during cyclic test for all connections tested, load-displacement data collected during dowel bearing test of CLT and mass data recorded before and after decay of the connection assemblies. On the other hand, the processed dataset contains load-displacement backbone data developed from the raw cyclic test data, SAWS parameters, equally developed using the raw cyclic test data, and yield force for all the CLT samples tested for dowel bearing strength.
DOI: 10.17632/mfsz6zpjkm.1
title: Clam recruitment and survival, Crab abundance in Willapa Bay 2024

description: In June-Sept 2024, seven stations spanning 20 km on intertidal flats of Willapa Bay, Washington (USA) were measured for recruitment of two clam species: Manila clams (Ruditapes philippinarum) and softshell clams (Mya arenaria). Recruitment was operationally defined as 250-500 micron size class and was measured from spat samplers four times during the summer, as well as seasonal recruitment of &gt;500 micron clams that survived to mid-September. (Spat samplers = mesh bags of 15x10 cm, 1 mm mesh size, filled with round gravel) Predator exclosures were established at four tidal elevations at one site, and survival of 1-cm and 2-cm clams was measured over 6 weeks. Crab abundances were determined from traps mid-way through the experiment, including three native (Metacarcinus [Cancer] magister, Cancer productus, Hemigrapsus oregonensis) and one non-native crab species (Carcinus maenas).
DOI: 10.17632/bdm7pzfh45.1
title: Obesity Impairs Cognitive Function with No Effects on Anxiety-like Behaviour in Zebrafish

description: Growth parameters: Body weight (BW), length (BL), and body mass index (BMI) after overfeeding in zebrafish
Total lipid levels after zebrafish overfeeding 
Brain Monoamine quantification after overfeeding in zebrafish 
Anxiety-like behavior quantification using Novel Tank Test (NTDT)
Short (STM)- and long-term memory (LTM) quantification using aversive learning tests
DOI: 10.17632/k6wyj2mjjk.1
title: The TIMET study, Manoogian et al., 2024, Annals of Internal Medicine

description: Source data for Tables 1-4, participant characteristics, health outcomes, and eating window adherence from the TIMET Study at baseline and 3 months.
Data from: Emily N.C. Manoogian, Michael J. Wilkinson, Monica O’Neal, et al. Time-Restricted Eating in Adults With Metabolic Syndrome: A Randomized Controlled Trial. Ann Intern Med. [Epub 1 October 2024]. doi:10.7326/M24-0859 . 
Link to manuscript: https://annals.org/aim/article/doi/10.7326/M24-0859
DOI: 10.17632/drrf4bxg6w.1
title: Pacific spiny dogfish intestine amino acid transport

description: Datasets are presented for Weinrauch, Blewett, Anderson (In Prep.). See the 'metadata' text file for descriptions of individual .csv files and descriptions of column headings within. Experiments were conducted on male Pacific spiny dogfish (Squalus suckleyi) with approval from the Bamfield Marine Sciences Centre Animal Care Committee (protocol RS-21-03-R1) and collection permits from Fisheries and Oceans Canada (XR 264 2023) in Bamfield, BC, Canada in summer 2023. This dataset supported a study that examined the mechanisms of nutrient acquisition in the spiral valve intestine. To characterize the mechanisms of transport kinetic transport assays were fist conducted. To identify putative carriers of amino acids, additional fluxes were conducted in reduced sodium conditions (to deduce whether transport is sodium dependent) or alongside 100X the concentration of other amino acids known to utilise shared transport pathways in mammals. The interplay between amino acids and oleic acid was next assessed with the application of oleic acid to either the mucosal or serosal solutions. Finally, transport rates following feeding were measured. Together, this study provides new data on the mechanisms of dietary nutrient uptake and transport dynamics within an evolutionarily- and ecologically- important elasmobranch.
DOI: 10.17632/tbrnp6vrnj.1
title: Dataset of Leak Simulations in Experimental Testbed Water Distribution System

description: This is the first fully labeled open dataset for leak detection and localization in water distribution systems. This dataset includes two hundred and eighty signals acquired from a laboratory-scale water distribution testbed with four types of induced leaks and no-leak. The testbed was 47 m long built from 152.4 mm diameter PVC pipes. Two accelerometers (A1 and A2), two hydrophones (H1 and H2), and two dynamic pressure sensors (P1 and P2) were deployed to measure acceleration, acoustic, and dynamic pressure data. The data were recorded through controlled experiments where the following were changed: network architecture, leak type, background flow condition, background noise condition, and sensor types and locations. Each signal was recorded for 30 seconds. Network architectures were looped (LO) and branched (BR). Leak types were Longitudinal Crack (LC), Circumferential Crack (CC), Gasket Leak (GL), Orifice Leak (OL), and No-leak (NL). Background flow conditions included 0 L/s (ND), 0.18 L/s, 0.47 L/s, and Transient (background flow rate abruptly changed from 0.47 L/s to 0 L/s at the second 20th of 30-second long measurements). Background noise conditions, with noise (N) and without noise (NN), determined whether a background noise was present during acoustic data measurements. Accelerometer and dynamic pressure data are in ‘.csv’ format, and the hydrophone data are in ‘.raw’ format with 8000 Hz frequency. The file “Python code to convert raw acoustic data to pandas DataFrame.py” converts the raw hydrophone data to DataFrame in Python.
DOI: 10.17632/75cxwyt29w.1
title: Leishmania donovani (HU3) complete transcripts

description: This dataset contains 790 sequences of transcripts considered complete molecules. These transcripts were generated and sequenced according to the procedure: Iso-Seq™ Template preparation for Sequel® Systems (PacBio). The RNA samples were derived from logarithmic phase promastigotes of the HU3 strain of Leishmania donovani. The transcripts represent complete sequences because they had at their 5’-end at least 8 nucleotides derived from the 3’ end of the spliced-leader (SL) sequence, and a poly-A at their 3’-end. These sequence elements were trimmed out.
DOI: 10.17632/jsmg43hw46.1
title: Obesity Impairs Cognitive Function with No Effects on Anxiety-like Behaviour in Zebrafish-EXCEL

description: Data for figures in the paper
DOI: 10.57754/fdat.6z6x3-sg338
title: Eye-Tracking experiment on the processing of idiomatic expressions

description: This experimental data was created in the context of the project B9 Getting a Grip on Non-Literal Meaning; The Dynamics of Understanding; Idiomatic Expressions in Language Learners. It is an eye-tracking experiment.
In this experiment we tested online processing mechnisms for idiomatic expressions in native adults, first language learners (ten and thirteen years of age) and second language learners. Participants listened to idiom fragments missing the final word. At the same time participants viewed words displayed on the screen that were either (i) correct idiomatic completions, (ii) words semantically related to the correct idiomatic completion or (iii) unrelated words. We measured the amount and time-course of fixations to displayed words while listening to idiom fragments. Using this paradigm we aimed to measure (1) whether participant groups predict idiom-final words and (2) whether they activate constituent meanings within idioms.
description: Research carried out in work package B09 of the SFB 833.
DOI: 10.17632/x6r82jkw9h.1
title: Data from: Shading by vegetation facilitates cryptic reproductive behaviour in a tropical songbird

description: Data and R codes corresponding to the article:
Biagolini-Jr CB, Diniz P, Macedo R, Webster M. 2024. Shading by vegetation facilitates cryptic reproductive behaviour in a tropical songbird. Ibis. https://doi.org/10.1111/ibi.13363

Data include (i) information about extra-pair paternity and intraspecific brood parasitism in blue-black grassquits (Volatinia jacarina); (ii) the structural complexity of the vegetation surrounding the grassquit nests.
DOI: 10.17632/phvh82vd9g.1
title: Effects of psoriasis and psoralen exposure on the somatic mutation landscape of the skin

description: Data supporting our manuscript "Effects of psoriasis and psoralen exposure on the somatic mutation landscape of the skin" by Olafsson et al.
DOI: 10.17632/jvht8699tz.1
title: LDHU3_09.1750

description: Bacterial trigger factor protein (TF) C-terminus; Leishmania donovani (HU3 strain)
DOI: 10.17632/25mmb7642x.1
title: LDHU3_09.1720

description: Glycosyl hydrolase family 47; Leishmania donovani (HU3 strain)
DOI: 10.17632/9s3gs755pr.1
title: LDHU3_09.1740

description: SET10; Leishmania donovani (HU3 strain)
DOI: 10.17632/ny8889j8s5.1
title: LDHU3_09.1660

description: Histone H2B; Leishmania donovani (HU3 strain)
DOI: 10.17632/xcbmm8w4k5.1
title: LDHU3_09.1610

description: PPPDE peptidase domain containing protein | PPPDE2; Leishmania donovani (HU3 strain)
DOI: 10.5281/zenodo.14691304
title: Response Adaptive Clinical Trials

description: In this GitHub repository, we provide a collection of response-adaptive trials. Our goal is to continuously update and expand this collection. We encourage contributions from the community.
DOI: 10.17632/8nymgbd488.1
title: LDHU3_09.1800

description: Rhodanese domain-containing protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/sc8xh8m8vh.1
title: PSQI data in HIV and healthy controls

description: Data used in manuscript, "Poor subjective sleep reported by people living with HIV is associated with impaired working memory".
DOI: 10.17632/s5cwpjftrv.1
title: LDHU3_09.1790

description: DnaJ domain-containing protein | JDP60 | J60; Leishmania donovani (HU3 strain)
DOI: 10.17632/zw26g4737g.1
title: The black-legged tick Ixodes scapularis detects CO₂ without the Haller’s organ

description: This repository contains the raw data for the following publication:

Städele Carola (2023), The black-legged tick Ixodes scapularis detects CO2 without the Haller’s organ


DATA INFO:
**********************************************
Due to storage limitations, we are providing tab delimited .txt files that contain the raw x-y position data of tracked ticks.
Each .txt file contains data from a single tick. The columns are:
 (1) time information in seconds 
 (2) x positions in cm 
 (3) y positions in cm
Further details about each data set can be found in the description of each folder. 

ANALYSIS SCRIPTS:
**********************************************
For analysis, we used custom written MATLAB scripts. The analysis codes are not included in the repository. Requests for access to analysis codes should be directed to the lead contact, Carola Städele (carola@neurobiologie.de).
DOI: 10.17632/bvjfjd487t.1
title: AMR

description: Rebars evaluation with the AMR sensor
DOI: 10.17632/t4wbbfmk6w.1
title: Borders and population growth: Evidence from a century of border regime changes on the Austrian-Czech border.

description: The files in this directory contain the replication package for the following publication: Coufalová, Lucie, et al. (2024) Borders and population growth: Evidence from a century of border regime changes on the Austrian-Czech border. MUNI ECON Working Paper, 2024. No. 2024-03.

We analyze the impacts of three major unexpected border regime changes that occurred during the course of 20th century on population growth along the Austrian-Czech border. Using historical municipal-level census data reaching back to 1880, we find no effects of the dissolution of the Austro-Hungarian Empire (1919) but strong and oppositely signed effects of the drawing (1948) and the fall (1989) of the Iron Curtain in both countries. Our findings indicate that border regimes affect population growth via economic as well as non-economic mechanisms.

- The file history_replication_fin.do is the stata analysis file. It reproduces all tables with table numbers identical to the numbering in the document. It also produces data for maps and figures. To draw the maps, you will need an appropriate shape file (available at https://www.data.gv.at for Austria and https://geoportal.cuzk.cz/ for the Czech Republic). 
To run the program, you will need the data file (hist_finest.dta) and to adjust the path in the first program line.
- The file historyout. smcl is the log file of this program and shows the output produced from the *.do file. It serves documentation and readability purposes only.
- The file hist_finest.dta is the data file. It contains the indicators collected. The table below provides the variable names and codes in that data (along with some descriptive statistics).