cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27144723
title: Diaporthe species on palms

description: <b>Abstract: </b>The application of traditional morphological and ecological species concepts to closely related, asexual fungal taxa is challenging due to the lack of distinctive morphological characters and frequent cosmopolitan and plurivorous behaviour. As a result, multilocus sequence analysis (MLSA) has become a powerful and widely used tool to recognise and delimit independent evolutionary lineages (IEL) in fungi. However, MLSA can mask discordances in individual gene trees and lead to misinterpretation of speciation events. This phenomenon has been extensively documented in <i>Diaporthe</i>, and species identifications in this genus remains an ongoing challenge. However, the accurate delimitation of <i>Diaporthe</i> species is critical as the genus encompasses several cosmopolitan pathogens that cause serious diseases on many economically important plant hosts. In this regard, following a survey of palm leaf spotting fungi in Lisbon, Portugal, <i>Diaporthe</i> species occurring on <i>Arecaceae</i> hosts were used as a case study to implement an integrative taxonomic approach for a reliable species identification in the genus. Molecular analyses based on the genealogical concordance phylogenetic species recognition (GCPSR) and DNA-based species delimitation methods revealed that speciation events in the genus have been highly overestimated. Most IEL identified by the GCPSR were also recognised by Poisson tree processes (PTP) coalescent-based methods, which indicated that phylogenetic lineages in <i>Diaporthe </i>are likely influenced by incomplete lineage sorting (ILS) and reticulation events. Furthermore, the recognition of genetic recombination signals and the evaluation of genetic variability based on sequence polymorphisms reinforced these hypotheses. New clues towards the intraspecific variation in the common loci used for phylogenetic inference of <i>Diaporthe</i> species are discussed. These results demonstrate that intraspecific variability has often been used as an indicator to introduce new species in <i>Diaporthe</i>, which has led to a proliferation of species names in the genus. Based on these data, 53 species are reduced to synonymy with 18 existing <i>Diaporthe </i>species, and a new species, <i>D. pygmaeae</i>, is introduced. Thirteen new plant host-fungus associations are reported, all of which represent new host family records for <i>Arecaceae</i>. This study has recognised and resolved a total of 14 valid <i>Diaporthe</i> species associated with <i>Arecaceae</i> hosts worldwide, some of which are associated with disease symptoms. This illustrates the need for more systematic research to examine the complex of <i>Diaporthe</i> taxa associated with palms and determine their potential pathogenicity. By implementing a more rational framework for future studies on species delimitation in <i>Diaporthe</i>, this study provides a solid foundation to stabilise the taxonomy of species in the genus. Guidelines for species recognition, definition and identification in <i>Diaporthe</i> are included.
DOI: 10.15468/dl.asfxpy
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plecotus teneriffae Barrett-Hamilton, 1907",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036806-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vwp9xt
title: Occurrence Download

description: A dataset containing 661 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Squamata",
 "TaxonKey is Crocodylia",
 "TaxonKey is Testudines",
 "TaxonKey is Sphenodontia",
 "TaxonKey is Amphibia"
 ]
 },
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "and" : [
 "DecimalLongitude is greater than 159.0576324",
 "DecimalLongitude is less than 159.105423",
 "DecimalLatitude is greater than -31.5897255",
 "DecimalLatitude is less than -31.5106277",
 "Country is Australia"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 661 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036805-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25573/data.10042688
title: San Lorenzo Crane_Wind Speed

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Wind speed, interval max/min/avg<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.25573/data.10042688.v28
title: San Lorenzo Crane_Wind Speed

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Wind speed, interval max/min/avg<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.5281/zenodo.13869843
title: R Data for CPBS Report 23SDSU01 - Urban Demographic Shift of Pedestrian and Bicyclist Collisions, Equity, and Police Enforcement

description: Data for the statistical program R.
DOI: 10.5281/zenodo.13869844
title: R Data for CPBS Report 23SDSU01 - Urban Demographic Shift of Pedestrian and Bicyclist Collisions, Equity, and Police Enforcement

description: Data for the statistical program R.
DOI: 10.6069/jhwe-2r44
title: It’s a trap: ClpP substrates caught in action

description: Protein homeostasis in bacteria is regulated by proteases such as the tetradecameric caseinolytic protease P (ClpP). Although substrates of ClpP have been successfully deciphered in genetically engineered cells, methods which directly trap processed proteins within native cells are elusive. Here we introduce an in situ trapping strategy which utilizes trifunctional probes that bind to the active site serine of ClpP and capture adjacent substrates with an attached photocrosslinking moiety. Substrate deconvolution by mass spectrometry (MS) is accomplished after enrichment using an alkyne handle. We show that our two traps bind substoichiometrically to ClpP, retain protease activity, exhibit unprecedented selectivity for Staphylococcus aureus ClpP in living cells and capture numerous known and novel substrates. The exemplary validation of trapped hits using a targeted proteomics approach confirmed the fidelity of this technology. In conclusion, we provide a novel chemical platform suited to discover serine protease substrates beyond genetic engineering.
DOI: 10.25573/data.10042691
title: San Lorenzo Crane_Relative Humidity

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Relative humidity, interval max/min/avg<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.25573/data.10042691.v28
title: San Lorenzo Crane_Relative Humidity

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Relative humidity, interval max/min/avg<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.25573/data.10042691.v27
title: San Lorenzo Crane_Relative Humidity

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Relative humidity, interval max/min/avg<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.25573/data.10042679
title: San Lorenzo Crane_Precipitation

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Precipitation, interval total<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.25573/data.10042679.v29
title: San Lorenzo Crane_Precipitation

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Precipitation, interval total<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.25573/data.10042679.v28
title: San Lorenzo Crane_Precipitation

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Precipitation, interval total<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.15468/dl.hesrq7
title: Occurrence Download

description: A dataset containing 17946 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rupicapra pyrenaica Bonaparte, 1845",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 17946 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036807-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/icpsr24232.v1
title: Federal Justice Statistics Program: Defendants Sentenced Under the Sentencing Reform Act, 2007 [United States]
title: Version 1

description: These data contain records of criminal defendants who were sentenced pursuant to provisions of the Sentencing Reform Act (SRA) of 1984 and reported to the United States Sentencing Commission (USSC) during fiscal year 2007. It is estimated that over 90 percent of felony defendants in the federal criminal justice system are sentenced pursuant to the SRA of 1984. The data were obtained from the United States Sentencing Commission's Office of Policy Analysis' (OPA) Standardized Research Data File. The Standardized Research Data File consists of variables from the Monitoring Department's database, which is limited to those defendants whose records have been furnished to the USSC by United States district courts and United States magistrates, as well as variables created by the OPA specifically for research purposes. The data include variables from the Judgement and Conviction (J and C) order submitted by the court, background and guideline information collected from the Presentencing Report (PSR), and the report on sentencing hearing in the Statement of Reasons (SOR). These data contain detailed information such as the guideline base offense level, offense level adjustments, criminal history, departure status, statement of reasons given for departure, and basic demographic information. These data are the primary analysis file and include only statute, guideline computation, and adjustment variables for the most serious offense of conviction. These data are part of a series designed by the Urban Institute (Washington, DC) and the Bureau of Justice Statistics. Data and documentation were prepared by the Urban Institute.
description: ICPSR data undergo a confidentiality review and are altered when necessary to limit the risk of disclosure. ICPSR also routinely creates ready-to-go data files along with setups in the major statistical software formats as well as standard codebooks to accompany the data. In addition to these procedures, ICPSR performed the following processing steps for this data collection: Created variable labels and/or value labels..
description: Datasets: 
 
 DS1: Dataset
description: Federal Justice Statistics Program Data Series
description: Defendants sentenced pursuant to provisions of the Sentencing Reform Act (SRA) of 1984 and reported to the United States Sentencing Commission during fiscal year 2007.
DOI: 10.3886/icpsr24232.v2
title: Federal Justice Statistics Program: Defendants Sentenced Under the Sentencing Reform Act, 2007 [United States]
title: Version 2

description: These data contain records of criminal defendants who were sentenced pursuant to provisions of the Sentencing Reform Act (SRA) of 1984 and reported to the United States Sentencing Commission (USSC) during fiscal year 2007. It is estimated that over 90 percent of felony defendants in the federal criminal justice system are sentenced pursuant to the SRA of 1984. The data were obtained from the United States Sentencing Commission's Office of Policy Analysis' (OPA) Standardized Research Data File. The Standardized Research Data File consists of variables from the Monitoring Department's database, which is limited to those defendants whose records have been furnished to the USSC by United States district courts and United States magistrates, as well as variables created by the OPA specifically for research purposes. The data include variables from the Judgement and Conviction (J and C) order submitted by the court, background and guideline information collected from the Presentencing Report (PSR), and the report on sentencing hearing in the Statement of Reasons (SOR). These data contain detailed information such as the guideline base offense level, offense level adjustments, criminal history, departure status, statement of reasons given for departure, and basic demographic information. These data are the primary analysis file and include only statute, guideline computation, and adjustment variables for the most serious offense of conviction. These data are part of a series designed by the Urban Institute (Washington, DC) and the Bureau of Justice Statistics. Data and documentation were prepared by the Urban Institute.
description: Datasets: DS1: Federal Justice Statistics Program: Defendants Sentenced Under the Sentencing Reform Act, 2007 [United States]
description: Defendants sentenced pursuant to provisions of the Sentencing Reform Act (SRA) of 1984 and reported to the United States Sentencing Commission during fiscal year 2007.
DOI: 10.15468/dl.2u4w92
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Squamata",
 "TaxonKey is Crocodylia",
 "TaxonKey is Testudines",
 "TaxonKey is Sphenodontia",
 "TaxonKey is Amphibia"
 ]
 },
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "and" : [
 "DecimalLongitude is greater than 158.7988892",
 "DecimalLongitude is less than 158.9388885",
 "DecimalLatitude is greater than -54.7741661",
 "DecimalLatitude is less than -54.4955559",
 "Country is Australia"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036808-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25573/data.10042670
title: San Lorenzo Crane_Solar Radiation, Pyranometer

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Solar Radiation, Pyranometer, interval max/min/avg<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.25573/data.10042670.v29
title: San Lorenzo Crane_Solar Radiation, Pyranometer

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Solar Radiation, Pyranometer, interval max/min/avg<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.25573/data.10042670.v28
title: San Lorenzo Crane_Solar Radiation, Pyranometer

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Solar Radiation, Pyranometer, interval max/min/avg<br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.5517/cctwnht
title: CCDC 771357: Experimental Crystal Structure Determination

description: Related Article: G.Laus, K.Wurst, V.Kahlenberg, H.Kopacka, C.Kreutz, H.Schottenberger|2010|Z.Naturforsch.,B:Chem.Sci.|65|776|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccxnb2y
title: CCDC 853680: Experimental Crystal Structure Determination

description: Related Article: F.Hackenberg, A.Deally, G.Lally, S.Malenke, H.Muller-Bunz, F.Paradisi, S.Patil, D.Quaglia, M.Tacke|2012|Int.J.Inorg.Chem.|2012|121540|doi:10.1155/2012/121540
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc129pfh
title: CCDC 992416: Experimental Crystal Structure Determination

description: Related Article: Li Wu, Ru-Xia Yan, Chen Shi, Hua-Ying Chen, Ke Wu, De- Yang Ma, Chun-Xin LV|2014|Guangzhou Huagong|42|72|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc12bgql
title: CCDC 993169: Experimental Crystal Structure Determination

description: Related Article: M. Iqbal, P. Quayle, J. Raftery|2020|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc12v8dl
title: CCDC 1008349: Experimental Crystal Structure Determination

description: Related Article: Maciej Kubicki|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1jbdfp
title: CCDC 1410172: Experimental Crystal Structure Determination

description: Related Article: Karl Robertson, Fraser White, Peter Tasker|2015|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ll6x9
title: CCDC 1477271: Experimental Crystal Structure Determination

description: Related Article: Pedro Valerga, M.Carmen Puerta, Francys E. Fernández|2016|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.ybu8bs
title: Occurrence Download

description: A dataset containing 200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Iberolacerta aranica (Arribas, 1993)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 200 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036809-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc1qb6r0
title: CCDC 1588742: Experimental Crystal Structure Determination

description: Related Article: Neslihan Şahin, Serap Şahin-Bölükbaşı, Muhammad Nawaz Tahir, Cengiz Arıcı, Esranur Çevik, Nevin Gürbüz, İsmail Özdemir, Brian S. Cummings|2019|J.Mol.Struct.|1179|92|doi:10.1016/j.molstruc.2018.10.094
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zsyzp
title: CCDC 1841244: Experimental Crystal Structure Determination

description: Related Article: Miguel Baya, Úrsula Belío, David Campillo, Israel Fernandez, Sara Fuertes, Antonio Martín|2018|Chem.-Eur.J.|24|13879|doi:10.1002/chem.201802542
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.