cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/a9e-snn-p9a
title: Pagurus cuanensis Bell 1845

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/whn-yvf-gz2
title: Rocinela signata Schioedte & Meinert 1879

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/g87-nnb-4ke
title: Natatolana natalensis (Barnard 1940)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/q2d-ra8-9l0
title: Pagurus cuanensis Bell 1845

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/0zl-pws-rqn
title: Trapezia cymodoce (Herbst 1801)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/45q-pp0-dlp
title: Galathea intermedia Liljeborg 1851

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/3hd-sre-8p7
title: Pandalina brevirostris (Rathke 1843)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/571-fad-j33
title: Tetralia cavimana Heller 1861

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/m3r-ahq-lwe
title: Tetralia cavimana Heller 1861

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/wrb-ty3-5n8
title: Pandalus montagui Leach 1814

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/fnx-gdv-mjr
title: Spirontocaris liljeborgii (Danielssen 1859)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/ltx-b8t-wjd
title: Galathea intermedia Liljeborg 1851

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/tzj-9ax-9cp
title: Galathea dispersa Bate 1859

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/yv8-rx7-kzx
title: Galathea dispersa Bate 1859

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/bly-3ay-x0a
title: Munida speciosa von Martens 1878

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/jg8-epc-zh6
title: Natatolana natalensis (Barnard 1940)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/vrm-5rm-e11
title: Pagurus pubescens Kröyer 1838

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/l3v-78h-x7t
title: Galathea

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/lzk-0mq-zk5
title: Trapezia tigrina Eydoux & Souleyet 1842

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/vl6-11t-ww9
title: Trapezia ferruginea Latreille 1828

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/h92-kqw-ljz
title: Pandalina brevirostris (Rathke 1843)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/z9t-de6-z1p
title: Spirontocaris liljeborgii (Danielssen 1859)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/2kz-za6-066
title: Pandalus montagui Leach 1814

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/t2y-494-skn
title: Spirontocaris liljeborgii (Danielssen 1859)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/cfs-3gs-9rl
title: Pagurus pubescens Kröyer 1838

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/wbk-m94-h9k
title: Trapezia guttata Rueppell 1830

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/yva-jwk-l5f
title: Galathea intermedia Liljeborg 1851

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/n6w-feg-30d
title: Pandalina brevirostris (Rathke 1843)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/ztm-jls-vrp
title: Liocarcinus depurator (Linnaeus 1758)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/k2d-tw6-h39
title: Trapezia tigrina Eydoux & Souleyet 1842

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/xvt-e27-zk4
title: Processa nouveli subsp. holthuisi Al-adhub & Williamson 1975

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/qse-2dv-tn3
title: Macropodia tenuirostris (Leach 1814)

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/xe5-a3f-kc5
title: Munida

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.5281/zenodo.15298487
title: Terrestrial Laser Scanning vs. Allometric Models: A Meta-Analysis of Accuracy and Reliability in Forest Biomass Estimation

description: This is the supplementary materials to the meta analysis study.
DOI: 10.5281/zenodo.15298488
title: Terrestrial Laser Scanning vs. Allometric Models: A Meta-Analysis of Accuracy and Reliability in Forest Biomass Estimation

description: This is the supplementary materials to the meta analysis study.
DOI: 10.5281/zenodo.15298651
title: Terrestrial Laser Scanning vs. Allometric Models: A Meta-Analysis of Accuracy and Reliability in Forest Biomass Estimation

description: This is the supplementary materials to the meta analysis study.
DOI: 10.15468/dl.qjfhfm
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mimachlamys crassicostata (G.B.Sowerby II, 1842)",
 "Year 2000-2025"
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003157-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11080749
title: Supplementary Information for the manuscript: "Gene expression evolution is predicted by stronger selection at more pleiotropic genes"

description: This repository contains the supplementary information for the manuscript "Gene expression evolution is predicted by stronger selection at more pleiotropic genes".

The supplementary data "data.tar.gz" is related to the Github repository https://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression.

Content of the repository



Appendix S1. Imputation quality testing with Beagle-5.4 software on the raw VCF file.

Script S1. BSFG estimates (50.9 MB).

Script S2. WGCNA analysis and results G1 (99.6 MB).

Data S1. Datasets resulting from the global genomics analysis of the output of the transcriptomics pipeline (5.9 MB).

Data S2. VCF file containing the 566,296 quality-checked SNPs (1.1 GB).

Data S3. VCF file containing the 358,142 SNPs with a call rate higher or equal to 50% (964.3 MB).

Data S4. VCF file containing the imputed genotypes (964.3 MB).

Data S5. Results of the imputation tests (479.5 kB).

Data S6. VCF file containing imputed genotypes where SNPs with a minor allele frequency lower than 0.05 have been filtered out (MAF $\leq$ 0.05) (176.0 MB).

Data S7. List of the 1,273 significant eQTL associations (for gene expression levels or relative fitness as phenotypes) (61.2 kB).

Data S8. List of allele frequency changes (AFCs) for every markers in HD environment, for lines L1, L2, L3, L5, L6, Mx1 and Mx2 (32.4 MB).

Data S9. List of all SNPs indicating if their AFC is significantly higher in each line and their degree of parallelism (2.4 MB).

data.tar.gz. Dataset mandatory to re-run the genomics analysis (see ttps://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression).
DOI: 10.5281/zenodo.15291606
title: Supplementary Information for the manuscript: "Gene expression evolution is predicted by stronger selection at more pleiotropic genes"

description: This repository contains the supplementary information for the manuscript "Gene expression evolution is predicted by stronger selection at more pleiotropic genes" (https://doi.org/10.1101/2024.07.22.604294).

The supplementary data "data.tar.gz" is related to the Github repository https://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression.

Content of the repository



Appendix S1. Imputation quality testing with Beagle-5.4 software on the raw VCF file (82.9 MB).

Script S1. BSFG estimates (50.9 MB).

Script S2. WGCNA analysis and results G1 (99.6 MB).

Data S1. Datasets resulting from the global genomics analysis of the output of the transcriptomics pipeline (5.9 MB).

Data S2. VCF file containing the 566,296 quality-checked SNPs (1.1 GB).

Data S3. VCF file containing the 358,142 SNPs with a call rate higher or equal to 50% (964.3 MB).

Data S4. VCF file containing the imputed genotypes (964.3 MB).

Data S5. Results of the imputation tests (479.5 kB).

Data S6. VCF file containing imputed genotypes where SNPs with a minor allele frequency lower than 0.05 have been filtered out (MAF $\leq$ 0.05) (176.0 MB).

Data S7. List of the 1,273 significant eQTL associations (for gene expression levels or relative fitness as phenotypes) (61.2 kB).

Data S8. List of allele frequency changes (AFCs) for every markers in HD environment, for lines L1, L2, L3, L5, L6, Mx1 and Mx2 (32.4 MB).

Data S9. List of all SNPs indicating if their AFC is significantly higher in each line and their degree of parallelism (2.4 MB).

Data S10. Excel file containing the results of the gene functional enrichment analysis of the hub and eQTL carrier genes (33.7 KB).

data.tar.gz. Dataset mandatory to re-run the genomics analysis (see https://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression) (7.8 GB).
DOI: 10.5281/zenodo.15298510
title: Supplementary Information for the manuscript: "Gene expression evolution is predicted by stronger selection at more pleiotropic genes"

description: This repository contains the supplementary information for the manuscript "Gene expression evolution is predicted by stronger selection at more pleiotropic genes" (https://doi.org/10.1101/2024.07.22.604294).

The supplementary data "data.tar.gz" is related to the Github repository https://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression.

Content of the repository



Appendix S1. Imputation quality testing with Beagle-5.4 software on the raw VCF file (82.9 MB).

Script S1. BSFG estimates (50.9 MB).

Script S2. WGCNA analysis and results G1 (99.6 MB).

Data S1. Datasets resulting from the global genomics analysis of the output of the transcriptomics pipeline (5.9 MB).

Data S2. VCF file containing the 566,296 quality-checked SNPs (1.1 GB).

Data S3. VCF file containing the 358,142 SNPs with a call rate higher or equal to 50% (964.3 MB).

Data S4. VCF file containing the imputed genotypes (964.3 MB).

Data S5. Results of the imputation tests (479.5 kB).

Data S6. VCF file containing imputed genotypes where SNPs with a minor allele frequency lower than 0.05 have been filtered out (MAF $\leq$ 0.05) (176.0 MB).

Data S7. List of the 1,273 significant eQTL associations (for gene expression levels or relative fitness as phenotypes) (61.2 kB).

Data S8. List of allele frequency changes (AFCs) for every markers in HD environment, for lines L1, L2, L3, L5, L6, Mx1 and Mx2 (32.4 MB).

Data S9. List of all SNPs indicating if their AFC is significantly higher in each line and their degree of parallelism (2.4 MB).

Data S10. Excel file containing the results of the gene functional enrichment analysis of the hub and eQTL carrier genes (33.7 KB).

data.tar.gz. Dataset mandatory to re-run the genomics analysis (see https://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression) (7.8 GB).
DOI: 10.5281/zenodo.15212422
title: Obfuscated Functions for Neural Decompilation Improvement Models
DOI: 10.5281/zenodo.15212423
title: Obfuscated Functions for Neural Decompilation Improvement Models
DOI: 10.5281/zenodo.15298735
title: Modular Consciousness Fields
DOI: 10.5281/zenodo.15298736
title: Modular Consciousness Fields
DOI: 10.15468/dl.bjncwq
title: Occurrence Download

description: A dataset containing 316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "Geometry POLYGON((-100.30030 -40.31371,-43.69970 -40.31371,-43.69970 -17.68629,-100.30030 -17.68629,-100.30030 -40.31371))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Conanthera campanulata Lindl."
 ]
}

 The dataset includes 316 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003145-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.edbggr
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Andesiops peruvianus (Ulmer, 1920)"
 ]
}

 The dataset includes 95 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003143-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rsjspa
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mimachlamys sanguinea (Linnaeus, 1758)",
 "Year 2000-2025"
 ]
}

 The dataset includes 171 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003162-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15480262
title: Wide-Field Calcium Imaging During Object Exploration in a Two-Chamber Arena

description: This zipped file contains one dataset collected during behavioral experiments in which mice explored a rectangular chamber measuring 27 × 15 cm. On the right side of the arena, there is a 1 cm wide gap that leads to an adjacent chamber of the same size (27 × 15 cm), which contains an inanimate object. 

Raw fluorescence image stacks were recorded from three mice (S09, S10, and S11), with each recording saved in NumPy binary format (.npy). The images have been spatially registered, with the anatomical landmarks bregma and lambda located at coordinates (100, 75) and (100, 145), respectively. To enhance signal clarity, pixels outside regions of neural activity have been masked and assigned a gray value of 0. Each pixel represents an area of 60 microns, and the image sequences were captured at a frame rate of 25 Hz. This dataset is intended for studies involving neural imaging, signal processing, and behavioral analysis during social exploration tasks. A CSV file is also included, containing the tracked coordinates of the animal’s centroid throughout the experiment. The x and y columns indicate the centroid’s position, while the fluo_frame column maps each point to the corresponding frame in the fluorescence imaging data. The time column provides timestamps in seconds, with zero marking the onset of blue light illumination used for GCaMP signal excitation. Pixel resolution is 0.44 mm.
DOI: 10.5281/zenodo.15480263
title: Wide-Field Calcium Imaging During Object Exploration in a Two-Chamber Arena

description: This zipped file contains one dataset collected during behavioral experiments in which mice explored a rectangular chamber measuring 27 × 15 cm. On the right side of the arena, there is a 1 cm wide gap that leads to an adjacent chamber of the same size (27 × 15 cm), which contains an inanimate object. 

Raw fluorescence image stacks were recorded from three mice (S09, S10, and S11), with each recording saved in NumPy binary format (.npy). The images have been spatially registered, with the anatomical landmarks bregma and lambda located at coordinates (100, 75) and (100, 145), respectively. To enhance signal clarity, pixels outside regions of neural activity have been masked and assigned a gray value of 0. Each pixel represents an area of 60 microns, and the image sequences were captured at a frame rate of 25 Hz. This dataset is intended for studies involving neural imaging, signal processing, and behavioral analysis during social exploration tasks. A CSV file is also included, containing the tracked coordinates of the animal’s centroid throughout the experiment. The x and y columns indicate the centroid’s position, while the fluo_frame column maps each point to the corresponding frame in the fluorescence imaging data. The time column provides timestamps in seconds, with zero marking the onset of blue light illumination used for GCaMP signal excitation. Pixel resolution is 0.44 mm.
DOI: 10.7910/dvn/bfqxal
title: Restricted Access WFHS Leef 12-month Manager Interview Data

description: Release 4 of the restricted-access data for the Work, Family & Health Study collected at the Leef (long-term care) industry workplaces.
DOI: 10.7910/dvn/bfrbxf
title: Replication Data for: Reacting to the Olive Branch: Hawks, Doves, and Public Support for Cooperation

description: Replication data
DOI: 10.7910/dvn/26678
title: Assessing the effectivness of on-farm conservation projects in the High Andes

description: The objective was to assess the effectiveness of five on-farm conservation projects involving native crops maintained by smallholder farmers in the High Andes of South America. The data set includes variables from a household survey that took place in 3 countries: Ecuador, Peru, Bolivia. Househould survey with a stratified random sample of 748 households. The survey elicited information on project participation, application of the options provided by project interventions and examples of how they were applied in the farmers’ own words. An inventory of crops grown on each farm was obtained and for each crop the following information was collected: the number of farmer varieties that were sown, their seed sources, objectives of production, quantity produced in the previous growing season, quantities consumed and sold, as well as price received (if available). Standard socioeconomic information on family demographics, education, landholdings, sources of income, migration, participation in local organizations and government programs was also gathered
DOI: 10.21335/nmdc-577670012
title: Physical and biogeochemical data collected by CTD in Masfjorden and Lurefjorden in Vestland, Norway during cruise HB2025009011 in March, 2025.

description: The files contain temperature, practical salinity, oxygen, and depth measurements binned into 1 db pressure bins, collected using a CTD from RBR during cruise HB2025009011 in March 2025. Data were collected in Masfjorden, Fensfjorden, Lurefjorden and Byfjorden in Vestland, Norway. Water sample data (Oxygen, Dissolved Inorganic Carbon, Alkalinity, Ph, H2S, nutrients, ammonium, and salt) collected during the cruise are included. The cruise was organized by the Geophysical Institute, University of Bergen as a part of the course GEOF337. Data can be downloaded as one .nc file or three .txt file, where data in the .txt-files are separated into downcast (HB2025009011_CTD.txt) and bottle (HB2025009011_btl.txt) data and where meta-data are provided in HB2025009011_meta_data.txt.
DOI: 10.21335/nmdc-92774636
title: Physical, biogeochemical and biological data from Masfjorden, Lurefjorden and neighboring fjords in Vestland, Norway

description: We gather physical, biogeochemical, and biological data collected in Masfjorden, Lurefjorden, and neighboring fjords in Vestland, Norway, during cruises organized by the Institute of Marin Research and the University of Bergen. Data sets comprise, for example, profiles of salinity, temperature, oxygen, and (uncalibrated) fluorescence, concentrations of Dissolved Inorganic Carbon, Total Alkalinity, Nutrients, and Dissolved Oxygen at selected depths and station, mooring records (hydrography and currents) from sills and basins. The biological data consists of bottom trawl hauls with length mesurements of fish, community data from pelagic trawl catches using both Multi-Sampler (3 cod-ends) and 1 standard cod-end on pelagic trawls, and zooplankton data from multinet. Length data are included for sub-samples of mesopelagic fish and crustaceans captured and for all large fish and sub-samples of P. periphylla. The research is supported by the Norwegian Research Council through the projects HyponFjordFish (301077) and FJO2RD (323986) and by the Bjerknes centre through CLIFORD.