cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qddtx3
title: Occurrence Download

description: A dataset containing 6060499 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Chile",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 6060499 records from 821 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054318-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jc7cku
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pachycephala aurea Reichenow, 1899"
 ]
}

 The dataset includes 19 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038587-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zvy74x
title: Occurrence Download

description: A dataset containing 44248 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Bonaire, Sint Eustatius and Saba",
 {
 "or" : [
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate reprojected",
 "Issue is Country derived from coordinates"
 ]
 },
 "TaxonKey is Aves"
 ]
}

 The dataset includes 44248 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006252-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4b24nx
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crucibulum personatum Keen, 1958",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 67 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048300-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uu1s6e
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nepal",
 "Year 2003-2019",
 "TaxonKey is Shorea robusta Gaertn."
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006279-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8q478v
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-34 34, -34 42, -21 42, -21 34, -34 34))",
 "TaxonKey is one of (Kogia breviceps (Blainville, 1838), Kogia sima (Owen, 1866))",
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 9 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038585-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.teslbk
title: Occurrence Download

description: A dataset containing 692437 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Netherlands",
 {
 "or" : [
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate reprojected",
 "Issue is Country derived from coordinates"
 ]
 },
 "TaxonKey is Aves"
 ]
}

 The dataset includes 692437 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006280-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djazxx
title: Occurrence Download

description: A dataset containing 8267 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Muscisaxicola albilora Lafresnaye, 1855"
 ]
}

 The dataset includes 8267 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000498-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vnfcvw
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Palaeoaplysinaceae)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040069-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v2y4ur
title: Occurrence Download

description: A dataset containing 676596 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Denmark",
 {
 "or" : [
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate reprojected",
 "Issue is Country derived from coordinates"
 ]
 },
 "TaxonKey is Aves"
 ]
}

 The dataset includes 676596 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006300-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k6rcdb
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crucibulum radiata",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048310-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9gtzkr
title: Occurrence Download

description: A dataset containing 1028 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Tonga",
 {
 "or" : [
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate reprojected",
 "Issue is Country derived from coordinates"
 ]
 },
 "TaxonKey is Aves"
 ]
}

 The dataset includes 1028 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006244-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ned6ab
title: Occurrence Download

description: A dataset containing 234037 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cardellina pusilla (A.Wilson, 1811)",
 "Year 2022-2024"
 ]
}

 The dataset includes 234037 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038594-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fngxvp
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Montatheris hindii (Boulenger, 1910)"
 ]
}

 The dataset includes 31 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038620-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24425690
title: Additional file 1 of Physiological and transcriptomic analysis reveals the potential mechanism of Morinda officinalis How in response to freezing stress

description: Additional file 1: Table S1. Primer sequences used for qRT-PCR. Table S2. Difference of microstructure parameters of MO leaves under different freezing time. Table S3. The physiological changes of MO seedlings under freezing stress. Table S4. Quality control of transcriptome. Table S5. FPKM values of DEGs related to plant hormone signal transduction pathway. Table S6. FPKM values of DEGs related to starch and sucrose metabolism pathway. Table S7. FPKM values of DEGs related to AP2/ERFs and MYBs. Table S8. FPKM values of DEGs related to proline synthesis and degradation pathways. Table S9. The results of qRT-PCR.
DOI: 10.6084/m9.figshare.26630503
title: Additional file 13 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 13: Table S9. Alternative splicing events for 42 samples. List of all multi-isoform genes from this transcriptome, AS types of multi-isoform genes, and the distribution of different types of isoforms for each stage between the two breeds.
DOI: 10.6084/m9.figshare.26630500.v1
title: Additional file 12 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 12: Table S8. Integration of the PCA results and differential expressed transcripts. Fifty-nine transcripts from 58 genes were significantly up-regulated in the breast muscle of AA broiler compared to LS chicken, including 44 genes that formed a molecular network responsible for muscle development and protein synthesis.
DOI: 10.6084/m9.figshare.26630512.v1
title: Additional file 16 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 16: Table S10. Identified dominant transcripts for each developmental stage of AA broiler and LS chicken, respectively. “Yes” indicates that this transcript is the dominant transcript in this sample, “No” indicates that this transcript is not the dominant transcript in this sample. Each period has three biological replicates that are named P1, P2 and P3.
DOI: 10.6084/m9.figshare.26630518
title: Additional file 17 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 17: Table S11. Differentiated dominant transcripts between the two breeds. The multi-isoform genes exhibited switched dominant transcripts between AA broiler and LS chicken during muscle development.
DOI: 10.6084/m9.figshare.26630518.v1
title: Additional file 17 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 17: Table S11. Differentiated dominant transcripts between the two breeds. The multi-isoform genes exhibited switched dominant transcripts between AA broiler and LS chicken during muscle development.
DOI: 10.6084/m9.figshare.26630476
title: Additional file 4 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 4: Table S3. List of all qualitative transcripts and the genes with expression levels higher than 1.
DOI: 10.6084/m9.figshare.26630491.v1
title: Additional file 9 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 9: Table S6. PCA result. Each transcript’s eigenvector from the top 5 PC in AA broiler and LS chicken, respectively, and the transcript with the top 10% eigenvector in each PC between the two breeds. Furthermore, the top 10% contributed transcripts of the top PC involving myogenesis were found in  the top 3 PC of AA broiler, but did not exist in the top 4 PC of LS chicken.
DOI: 10.6084/m9.figshare.26630479
title: Additional file 5 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 5: Table S4. Evolutionary analysis. The numbers used to name the sublists correspond to the number of different types of the orthologous genes in Fig. 2.
DOI: 10.6084/m9.figshare.26582084
title: Additional file 2 of Promoter evolution of mammalian gene duplicates

description: Additional file 2: Table 1. Details of group numbers for Figure 1. Table 2. Details of group numbers for Figure 2. Table 3. Lists of human and mouse genes from ancient duplications with high level of promoter sequence similarities and their functional enrichment. Table 4. Lists of human and mouse genes from ancient duplications with high level of TF-binding similarities and their functional enrichment. Table 5. Assembled raw data of genes and paralogs.
DOI: 10.6084/m9.figshare.26630482
title: Additional file 6 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 6: Table S5. Transcriptional characteristics of skeletal muscles between the two breeds for seven developmental stages. The 10,877 transcripts from this transcriptome were clustered into nine characteristic transcriptional patterns. If the transcript was identified an transcriptional factor (TF), this transcript was marked “True”. Each transcript was grouped into a cluster, and marked 1 to 9, respectively.
DOI: 10.6084/m9.figshare.26630503.v1
title: Additional file 13 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 13: Table S9. Alternative splicing events for 42 samples. List of all multi-isoform genes from this transcriptome, AS types of multi-isoform genes, and the distribution of different types of isoforms for each stage between the two breeds.
DOI: 10.6084/m9.figshare.26630512
title: Additional file 16 of Comparative analyses of dynamic transcriptome profiles highlight key response genes and dominant isoforms for muscle development and growth in chicken

description: Additional file 16: Table S10. Identified dominant transcripts for each developmental stage of AA broiler and LS chicken, respectively. “Yes” indicates that this transcript is the dominant transcript in this sample, “No” indicates that this transcript is not the dominant transcript in this sample. Each period has three biological replicates that are named P1, P2 and P3.
DOI: 10.6084/m9.figshare.26582084.v1
title: Additional file 2 of Promoter evolution of mammalian gene duplicates

description: Additional file 2: Table 1. Details of group numbers for Figure 1. Table 2. Details of group numbers for Figure 2. Table 3. Lists of human and mouse genes from ancient duplications with high level of promoter sequence similarities and their functional enrichment. Table 4. Lists of human and mouse genes from ancient duplications with high level of TF-binding similarities and their functional enrichment. Table 5. Assembled raw data of genes and paralogs.
DOI: 10.5517/ccdc.csd.cc2j7yyp
title: CCDC 2331353: Experimental Crystal Structure Determination

description: Related Article: Öznur Doğan Ulu, Sümeyya Serin, Namık Özdemir, İsmail Özdemir|2025|J.Mol.Struct.|1320|139479|doi:10.1016/j.molstruc.2024.139479
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jhvd9
title: CCDC 2338931: Experimental Crystal Structure Determination

description: Related Article: Dominika Prętka, Dawid Marcinkowski, Agnieszka Siwiak, Maciej Kubicki, Giuseppe Consiglio, Violetta Patroniak, Adam Gorczyński|2024|CrystEngComm|26|4167|doi:10.1039/D4CE00450G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jhvfb
title: CCDC 2338932: Experimental Crystal Structure Determination

description: Related Article: Dominika Prętka, Dawid Marcinkowski, Agnieszka Siwiak, Maciej Kubicki, Giuseppe Consiglio, Violetta Patroniak, Adam Gorczyński|2024|CrystEngComm|26|4167|doi:10.1039/D4CE00450G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jkxjk
title: CCDC 2340919: Experimental Crystal Structure Determination

description: Related Article: Nivedita Chaudhri, Matthew J. Guberman-Pfeffer, Matthias Zeller, Christian Brückner|2024|Dalton Trans.|53|13142|doi:10.1039/D4DT01386G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpcl4
title: CCDC 2284656: Experimental Crystal Structure Determination

description: Related Article: Tanner George, Tamika Grant, Isadora Schumann Munhoz, Thai Do, Jason D. Masuda|2024|Dalton Trans.|53|13107|doi:10.1039/D4DT01561D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jkxkl
title: CCDC 2340920: Experimental Crystal Structure Determination

description: Related Article: Nivedita Chaudhri, Matthew J. Guberman-Pfeffer, Matthias Zeller, Christian Brückner|2024|Dalton Trans.|53|13142|doi:10.1039/D4DT01386G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpcm5
title: CCDC 2284657: Experimental Crystal Structure Determination

description: Related Article: Tanner George, Tamika Grant, Isadora Schumann Munhoz, Thai Do, Jason D. Masuda|2024|Dalton Trans.|53|13107|doi:10.1039/D4DT01561D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpcp7
title: CCDC 2284659: Experimental Crystal Structure Determination

description: Related Article: Tanner George, Tamika Grant, Isadora Schumann Munhoz, Thai Do, Jason D. Masuda|2024|Dalton Trans.|53|13107|doi:10.1039/D4DT01561D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpcr9
title: CCDC 2284661: Experimental Crystal Structure Determination

description: Related Article: Tanner George, Tamika Grant, Isadora Schumann Munhoz, Thai Do, Jason D. Masuda|2024|Dalton Trans.|53|13107|doi:10.1039/D4DT01561D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gpcq8
title: CCDC 2284660: Experimental Crystal Structure Determination

description: Related Article: Tanner George, Tamika Grant, Isadora Schumann Munhoz, Thai Do, Jason D. Masuda|2024|Dalton Trans.|53|13107|doi:10.1039/D4DT01561D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jl5t4
title: CCDC 2341176: Experimental Crystal Structure Determination

description: Related Article: Tanner George, Tamika Grant, Isadora Schumann Munhoz, Thai Do, Jason D. Masuda|2024|Dalton Trans.|53|13107|doi:10.1039/D4DT01561D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.