cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/112904
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1301 using a Ashtech ADU2 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112905
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1301 using a Furuno GP-90D instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112902
title: Gyrocompass data collected during research cruise NH1301 using a Sperry MK-37 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112899
title: Meteorological Station data collected during research cruise NH1301 using a SIO MET-System instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112906
title: Meteorological Station data collected during research cruise NH1301 using a SIO MET-System instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112900
title: Winch data collected during research cruise NH1301 using a Markey DUSH-5 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7428455
title: Additional file 1: of Multiple environmental stressors induce complex transcriptomic responses indicative of phenotypic outcomes in Western fence lizard

description: Tables. Include additional results in support of the main manuscript and are provided in the file. (XLSX 2291â kb)
DOI: 10.7284/112909
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise NH1302 using a Hawaii UHDAS instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7428455.v1
title: Additional file 1: of Multiple environmental stressors induce complex transcriptomic responses indicative of phenotypic outcomes in Western fence lizard

description: Tables. Include additional results in support of the main manuscript and are provided in the file. (XLSX 2291â kb)
DOI: 10.7284/112912
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1302 using a Furuno GP-150 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112914
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1302 using a Garmin GPS-17HVS instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112915
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1302 using a Ashtech ADU2 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7428419
title: bd dataset final figshare.xlsx

description: Records of wild amphibians tested for Batrachochytrium dendrobatidis in the field, collected from the literature, with a minimum of 4 animals tested, surveyed over a continuous time span of no more than 4 consecutive months. Spatiotemporal information, life history traits and climate data is included.<br>
DOI: 10.7284/112916
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1302 using a Furuno GP-90D instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112913
title: Gyrocompass data collected during research cruise NH1302 using a Sperry MK-37 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112910
title: Meteorological Station data collected during research cruise NH1302 using a SIO MET-System instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427966
title: Fig 4. dSTORM images of rhabdomeres

description: Synd and p-Moe localization at the rhabdomere base in the thinner proximal portion of the isolated ommatidia from late pupal flies observed from the cytoplasmic side by dSTORM. Image frames of 30,000 – 53,000 were denoised and deconvolved to increase resolution in noisy images and reconstructed using DAOSTORM. Sample drift was corrected by iterative cross correlation of time projection of 1,000 frames of the original STORM images. To superimpose the 2-color images, a reference image using bleed through of shorter wavelength was obtained before dSTORM imaging and used to calculate the registration parameters using Chromagnon v0.64 software. Fluorescent spots were placed as 30nm FWHM Gaussian peaks with a pixel size of 10 nm.
DOI: 10.6084/m9.figshare.7427966.v1
title: Fig 4. dSTORM images of rhabdomeres

description: Synd and p-Moe localization at the rhabdomere base in the thinner proximal portion of the isolated ommatidia from late pupal flies observed from the cytoplasmic side by dSTORM. Image frames of 30,000 – 53,000 were denoised and deconvolved to increase resolution in noisy images and reconstructed using DAOSTORM. Sample drift was corrected by iterative cross correlation of time projection of 1,000 frames of the original STORM images. To superimpose the 2-color images, a reference image using bleed through of shorter wavelength was obtained before dSTORM imaging and used to calculate the registration parameters using Chromagnon v0.64 software. Fluorescent spots were placed as 30nm FWHM Gaussian peaks with a pixel size of 10 nm.
DOI: 10.7284/112917
title: Meteorological Station data collected during research cruise NH1302 using a SIO MET-System instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427942
title: NCB-S37231B Fig 3e and 3f Raw images.ai

description: Raw images for Fig 3e and 3f.<br>Original images (not adjusted for brightness or contrast) provided for the right, middle, and left panels of Fig 3e show zebrafish embryos 36 hours-post-fertilization stained with acridine orange after microinjection of indicated morpholinos (MO) along with indicated synthetic mRNAs, in both non-irradiated (-IR) and irradiated (+IR) conditions. Boxed embryos are those selected as representative and shown in Fig 3e. Asterisks mark embryos used for spinal chord quantifications.<br>Fig 3f show the cropped images from 3e converted to grayscale. A yellow rectangle from the neural tube, excluding the yolk tube ventrally, indicates the area of acridine orange signal quantified.
DOI: 10.7284/112908
title: Singlebeam Echosounder data collected during research cruise NH1302 using a Knudsen 320B/R instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427933
title: Virus Dataset

description: Virus spectral dataset in MATLAB format.<br>Please cite:<br>- Santos MCD, Nascimento YM, Monteiro JD, et al. ATR-FTIR spectroscopy with chemometric algorithms of multivariate classification in the discrimination between healthy vs. dengue vs. chikungunya vs. zika clinical samples. Anal Methods 2018; 10: 1280–1285.<br>
DOI: 10.7284/112911
title: Winch data collected during research cruise NH1302 using a Markey DUSH-5 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427942.v2
title: NCB-S37231B Fig 3e and 3f Raw images.ai

description: Raw images for Fig 3e and 3f.<br>Original images (not adjusted for brightness or contrast) provided for the right, middle, and left panels of Fig 3e show zebrafish embryos 36 hours-post-fertilization stained with acridine orange after microinjection of indicated morpholinos (MO) along with indicated synthetic mRNAs, in both non-irradiated (-IR) and irradiated (+IR) conditions. Boxed embryos are those selected as representative and shown in Fig 3e. Asterisks mark embryos used for spinal chord quantifications.<br>Fig 3f show the cropped images from 3e converted to grayscale. A yellow rectangle from the neural tube, excluding the yolk tube ventrally, indicates the area of acridine orange signal quantified.
DOI: 10.6084/m9.figshare.7427927
title: Fungi Dataset

description: Fungi spectral dataset in MATLAB format. <br><br>Please cite:- Costa FSL, Silva PP, Morais CLM, et al. Attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy as a new technology for discrimination between Cryptococcus neoformans and Cryptococcus gattii. Anal Methods 2016; 8: 7107–7115.- Morais CLM, Costa FSL, Lima KMG. Variable selection with a support vector machine for discriminating Cryptococcus fungal species based on ATR FTIR spectroscopy. Anal Methods 2017; 9: 2964–2970.<br><br>
DOI: 10.6084/m9.figshare.7427933.v1
title: Virus Dataset

description: Virus spectral dataset in MATLAB format.<br>Please cite:<br>- Santos MCD, Nascimento YM, Monteiro JD, et al. ATR-FTIR spectroscopy with chemometric algorithms of multivariate classification in the discrimination between healthy vs. dengue vs. chikungunya vs. zika clinical samples. Anal Methods 2018; 10: 1280–1285.<br>
DOI: 10.7284/112920
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise NH1304 using a Hawaii UHDAS instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427918
title: Dataset associated with "Multicolor single-molecule tracking of mRNA interactions with RNP granules" -2/2

description: Raw image data used to create figures for "Multicolor single-molecule tracking of mRNA interactions with RNP granules"
DOI: 10.7284/112923
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1304 using a Furuno GP-150 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112925
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1304 using a Garmin GPS-17HVS instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427879.v1
title: Brgoch Superhard Materials Training Data

description: 2574 (2537) materials used for training regressors that predict shear and bulk modulus. The xlsx file provided consists of the original data used to train models described in reference 1 below. The json.gz file includes structural and composition based data from the Materials Project as well as mpid values. 37 entries have been removed from this file as they could not be properly cross referenced on the Materials Project database. An additional 48 values have been marked as suspect due to large discrepancies in shear and bulk modulus from the source file and current MP values.<br>Data is available as Monty Encoder encoded JSON and as a XLSX file. Recommended access method is with the matminer Python package using the datasets module.<br>Note on citations: If you found this dataset useful and would like to cite it in your work, please be sure to cite its original sources below rather than or in addition to this page.<br>Dataset discussed in:<br>Machine Learning Directed Search for Ultraincompressible, Superhard Materials Aria Mansouri Tehrani, Anton O. Oliynyk, Marcus Parry, Zeshan Rizvi, Samantha Couper, Feng Lin, Lowell Miyagi, Taylor D. Sparks, and Jakoah Brgoch Journal of the American Chemical Society <strong>2018</strong> <em>140</em> (31), 9844-9853 DOI: 10.1021/jacs.8b02717 <br>
DOI: 10.7284/112926
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1304 using a Ashtech ADU2 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427816
title: Dataset associated with "Multicolor single-molecule tracking of mRNA interactions with RNP granules" -1/2

description: Raw image data used to create figures for "Multicolor single-molecule tracking of mRNA interactions with RNP granules"
DOI: 10.7284/112927
title: GNSS (Global Navigation Satellite System) data collected during research cruise NH1304 using a Furuno GP-90D instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427816.v1
title: Dataset associated with "Multicolor single-molecule tracking of mRNA interactions with RNP granules" -1/2

description: Raw image data used to create figures for "Multicolor single-molecule tracking of mRNA interactions with RNP granules"
DOI: 10.7284/112924
title: Gyrocompass data collected during research cruise NH1304 using a Sperry MK-37 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112921
title: Meteorological Station data collected during research cruise NH1304 using a SIO MET-System instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112928
title: Meteorological Station data collected during research cruise NH1304 using a SIO MET-System instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112918
title: Singlebeam Echosounder data collected during research cruise NH1304 using a Knudsen 320B/R instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112922
title: Winch data collected during research cruise NH1304 using a Markey DUSH-5 instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427639
title: Complete mitochondrial genomes of six species of the freshwater red algal order Batrachospermales (Rhodophyta)

description: Only two mitochondrial (mt) genomes had been reported in members of the red algal order Batrachospermales, which are confined to freshwater habitats. Additional mt genomes of six representative members (<i>Batrachospermum macrosporum</i>, <i>Kumanoa ambigua</i>, <i>K. mahlacensis</i>, <i>Paralemanea</i> sp., <i>Sheathia arcuata</i>, and <i>Sirodotia delicatula</i>) were sequenced aiming to gain insights on the evolution of their mt genomes from a comparative analysis with other red algal groups. Mt genomes sequenced had the following characteristics: lengths ranging between 24,864 nt and 29,785 nt, 22 to 26 protein-coding genes, G + C contents of 21.3 to 30.7%, number of tRNA of 16 to 37, non-coding DNA from 3.8% to 14.8%. Comparative analysis revealed that mt genomes in Batrachospermales are highly conserved in terms of genome size and gene content and synteny. Phylogenetic analyses based on COI nucleotide data revealed high bootstrap support only for the genera usually recovered in the phylogenetic analyses but no support for supra-generic groups. The insertion of a group II intron carrying an ORF coding for the corresponding intron maturase interrupting the <i>COI</i> gene was observed in <i>Paralamenea</i> sp. and accounted for its larger genome in comparison to the other Batrachospermales mt genomes.
DOI: 10.6084/m9.figshare.7427639.v1
title: Complete mitochondrial genomes of six species of the freshwater red algal order Batrachospermales (Rhodophyta)

description: Only two mitochondrial (mt) genomes had been reported in members of the red algal order Batrachospermales, which are confined to freshwater habitats. Additional mt genomes of six representative members (<i>Batrachospermum macrosporum</i>, <i>Kumanoa ambigua</i>, <i>K. mahlacensis</i>, <i>Paralemanea</i> sp., <i>Sheathia arcuata</i>, and <i>Sirodotia delicatula</i>) were sequenced aiming to gain insights on the evolution of their mt genomes from a comparative analysis with other red algal groups. Mt genomes sequenced had the following characteristics: lengths ranging between 24,864 nt and 29,785 nt, 22 to 26 protein-coding genes, G + C contents of 21.3 to 30.7%, number of tRNA of 16 to 37, non-coding DNA from 3.8% to 14.8%. Comparative analysis revealed that mt genomes in Batrachospermales are highly conserved in terms of genome size and gene content and synteny. Phylogenetic analyses based on COI nucleotide data revealed high bootstrap support only for the genera usually recovered in the phylogenetic analyses but no support for supra-generic groups. The insertion of a group II intron carrying an ORF coding for the corresponding intron maturase interrupting the <i>COI</i> gene was observed in <i>Paralamenea</i> sp. and accounted for its larger genome in comparison to the other Batrachospermales mt genomes.
DOI: 10.7284/112930
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise NH1305 using a Hawaii UHDAS instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427579
title: Three-dimensional kinematic corridors of the head, spine, and pelvis for small female driver seat occupants in near- and far-side oblique frontal impacts

description: <b>Objectives:</b> Analyses of recent automotive accident data indicate an increased risk of injury for small female occupants compared to males in similar accidents. Females have been shown to be more susceptible to spinal injuries than males. To protect this more vulnerable population, advanced anthropomorphic test devices (ATDs) and computer human body models are being developed and require biofidelity curves for validation. The aim of this study is to generate female-specific 3D kinematic corridors in near- and far-side oblique frontal impacts for the head, spine, and pelvis. <b>Methods:</b> Eight specimens were procured and prescreened for mass, stature, and quantitative computed tomography bone mineral density and preexisting injuries to minimize biologic variability. Sets of 4 noncolinear retroreflective targets were placed on the back of the head; dorsal spine at T1, T8, and L2; and posterior sacrum. Instrumented computed tomography scans were obtained to measure the orientation and position of the markers relative to anatomic fiducials. The specimens were placed on a buck representative of a generic automotive driver’s seat environment designed to minimize lower-extremity and pelvic motion. The buck was oriented such that the buck centerline was seated 30° from the impact vector in either a near- or far-side oblique frontal configuration. Preposition of the occupant was specified to the 50th percentile male H-point location, thigh and tibial angles, and torso angle. Impact was delivered via a servo-acceleration sled to the base of the buck with a 30 km/h 9 <i>g</i> trapezoidal pulse. Occupants were restrained by a standard 3-point belt that had a custom load-limiter device set to 2 kN at the D-ring side of the shoulder belt. Target motion was recorded at 1 kHz using a 3D optical motion capture system. Anatomic motion of the head, spine, and pelvis was calculated relative to the seat, and the average response was determined from 4 near-side and 4 far-side tests. The borders of the corridor were determined by calculating a standard deviational ellipse in the <i>x</i>, <i>y</i>, and <i>z</i> planes at each time step. <b>Results:</b> Plots of the biofidelity corridors for near- and far-side tests are shown in planes parallel to the seat from the lateral, rear, and overhead directions. Averaged peak excursions in the fore/aft and lateral directions are compared for the near- and far-side corridors. Near-side female and male tests are similarly compared. <b>Conclusions:</b> In general, average peak excursions were greater in the far-side configuration than in the near-side configuration. Peak excursion results compared well with similar tests conducted on male postmortem human subjects (PMHS). The kinematic corridors developed in the current study serve as a set of biofidelity corridors for the development of current and future physical and computational surrogates.
DOI: 10.7284/112929
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise NH1305 using a Sea-Bird SBE-911+ instrument system onboard the platform RV New Horizon

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7427528
title: Table 1. Subjects' background information in the current study

description: Subjects' background information in the current study: 11 near-native speakers and 22 native speakers as control group