cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29481047
title: Supplementary Material for the Article: <i>"COVID-19 Vaccine Adverse Events by Country Income Level: A Systematic Review and Meta-Analysis of Randomized Controlled Trials"</i>

description: This systematic review and meta-analysis synthesized data from 11 randomized controlled trials (7,841 participants) to estimate the incidence of adverse events following COVID-19 vaccination (AEFI) across countries categorized by income level. Studies published between 2020 and 2025 were retrieved from EMBASE, PubMed/MEDLINE, and Scopus. Relative risks were calculated using Mantel-Haenszel random-effects models, and subgroup analyses were performed by dose and income level. AEFI incidence was consistently higher in high-income countries compared to upper-middle-income countries, especially after the second dose. The most common events were injection-site pain, headache, myalgia, and fatigue. Meta-analyses confirmed significantly higher risk ratios for both local and systemic reactions in high-income settings. These findings highlight disparities in post-vaccination experiences and inform equitable surveillance strategies.
DOI: 10.6084/m9.figshare.29481047.v2
title: Supplementary Material for the Article: <i>"COVID-19 Vaccine Adverse Events by Country Income Level: A Systematic Review and Meta-Analysis of Randomized Controlled Trials"</i>

description: This systematic review and meta-analysis synthesized data from 11 randomized controlled trials (7,841 participants) to estimate the incidence of adverse events following COVID-19 vaccination (AEFI) across countries categorized by income level. Studies published between 2020 and 2025 were retrieved from EMBASE, PubMed/MEDLINE, and Scopus. Relative risks were calculated using Mantel-Haenszel random-effects models, and subgroup analyses were performed by dose and income level. AEFI incidence was consistently higher in high-income countries compared to upper-middle-income countries, especially after the second dose. The most common events were injection-site pain, headache, myalgia, and fatigue. Meta-analyses confirmed significantly higher risk ratios for both local and systemic reactions in high-income settings. These findings highlight disparities in post-vaccination experiences and inform equitable surveillance strategies.
DOI: 10.6084/m9.figshare.29481047.v1
title: Supplementary Material for the Article: <i>"COVID-19 Vaccine Adverse Events by Country Income Level: A Systematic Review and Meta-Analysis of Randomized Controlled Trials"</i>

description: This systematic review and meta-analysis synthesized data from 11 randomized controlled trials (7,841 participants) to estimate the incidence of adverse events following COVID-19 vaccination (AEFI) across countries categorized by income level. Studies published between 2020 and 2025 were retrieved from EMBASE, PubMed/MEDLINE, and Scopus. Relative risks were calculated using Mantel-Haenszel random-effects models, and subgroup analyses were performed by dose and income level. AEFI incidence was consistently higher in high-income countries compared to upper-middle-income countries, especially after the second dose. The most common events were injection-site pain, headache, myalgia, and fatigue. Meta-analyses confirmed significantly higher risk ratios for both local and systemic reactions in high-income settings. These findings highlight disparities in post-vaccination experiences and inform equitable surveillance strategies.
DOI: 10.5281/zenodo.15850134
title: Performance Evaluation of CIMI Electron Precipitation during Geomagnetic Storms with the Introduction of Multiple Reflections

description: For CIMI 100 km altitude precipitation files, the file name format is 2013w151_e_N_24.txt

The file name indicates the year 2013

'w' stands for With Multiple Reflection (WMR), If it was 'n', it will stand for No Multiple Reflection (NMR)

151 is the day of year. For 2013, it was May 31. So the simulation started at 0 UT, May 31.

'_e_' indicates this file has electron precipitation data.

'N' indicates the northern hemisphere.

'24' indicates 24th simulation hour from the start of simulation. So if the simulation started at 0 UT, May 31, 24th hour indicates 0 UT, June 1.

The file provides CIMI energy and particle fluxes at loss cone altitudes at 24th hour of simulation (0 UT, June 1, 2013 as simulation starts from 0 UT, May 31, 2013)Row 3-5: energy channels (keV) for CIMI. After the rows where the values of mlat, mlt, mlon, area, mc, Bi are specified, energy and particle fluxes are provided for corresponding mlat, mlon for all energy channels mentioned in row 3-5.Similarly 2013w151_e_N_29.txt provides the same for 29th hour (5 UT, June 1, 2013)

For CIMI electron precipitation at DMSP orbits, the file name format is 2013w151_dm016_e.flux

The file provides CIMI particle flux at DMSP altitudes for all DMSP energy channels inside 500-30000 eV, with the particle flux for the lowest energy channel (646 eV or 0.646 keV) at the left for every record. Total number of records (one minute interval), and number of energy channels (ipos, ie, respectively) are mentioned at the top of each file. 

The file name indicates the year 2013

'w' stands for With Multiple Reflection (WMR), If it was 'n', it will stand for No Multiple Reflection (NMR)

151 is the day of year. For 2013, it was May 31. So the simulation started at 0 UT, May 31. However, the file provides precipitation data for the complete simulation period from the start of simulation.

All 'dm' files are CIMI particle fluxes at corresponding DMSP orbits. For example, dm016 stands for CIMI particle fluxes along DMSP F16 orbits.

'_e_' indicates this file has electron precipitation data.

Additional information

The file 'fluxWMR.dat' is used for Figure 1
DOI: 10.5281/zenodo.15850135
title: Performance Evaluation of CIMI Electron Precipitation during Geomagnetic Storms with the Introduction of Multiple Reflections

description: For CIMI 100 km altitude precipitation files, the file name format is 2013w151_e_N_24.txt

The file name indicates the year 2013

'w' stands for With Multiple Reflection (WMR), If it was 'n', it will stand for No Multiple Reflection (NMR)

151 is the day of year. For 2013, it was May 31. So the simulation started at 0 UT, May 31.

'_e_' indicates this file has electron precipitation data.

'N' indicates the northern hemisphere.

'24' indicates 24th simulation hour from the start of simulation. So if the simulation started at 0 UT, May 31, 24th hour indicates 0 UT, June 1.

The file provides CIMI energy and particle fluxes at loss cone altitudes at 24th hour of simulation (0 UT, June 1, 2013 as simulation starts from 0 UT, May 31, 2013)Row 3-5: energy channels (keV) for CIMI. After the rows where the values of mlat, mlt, mlon, area, mc, Bi are specified, energy and particle fluxes are provided for corresponding mlat, mlon for all energy channels mentioned in row 3-5.Similarly 2013w151_e_N_29.txt provides the same for 29th hour (5 UT, June 1, 2013)

For CIMI electron precipitation at DMSP orbits, the file name format is 2013w151_dm016_e.flux

The file provides CIMI particle flux at DMSP altitudes for all DMSP energy channels inside 500-30000 eV, with the particle flux for the lowest energy channel (646 eV or 0.646 keV) at the left for every record. Total number of records (one minute interval), and number of energy channels (ipos, ie, respectively) are mentioned at the top of each file. 

The file name indicates the year 2013

'w' stands for With Multiple Reflection (WMR), If it was 'n', it will stand for No Multiple Reflection (NMR)

151 is the day of year. For 2013, it was May 31. So the simulation started at 0 UT, May 31. However, the file provides precipitation data for the complete simulation period from the start of simulation.

All 'dm' files are CIMI particle fluxes at corresponding DMSP orbits. For example, dm016 stands for CIMI particle fluxes along DMSP F16 orbits.

'_e_' indicates this file has electron precipitation data.

Additional information

The file 'fluxWMR.dat' is used for Figure 1
DOI: 10.15468/dl.mzfzxe
title: Occurrence Download

description: A dataset containing 118 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-81.4214 24.49273,-79.1456 24.35753,-80.72289 30.82442,-82.11992 30.64416,-81.4214 24.49273))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pterois volitans",
 "Year 1891-2025"
 ]
}

 The dataset includes 118 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018653-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.knqk33
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Onychomys torridus"
 ]
}

 The dataset includes 16 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018654-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2n5fxz
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Grewia kakothamnos",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 126 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018656-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a23ps4
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Draba bennettii"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018657-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2kk5h6
title: Occurrence Download

description: A dataset containing 176 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dufourea bernardina"
 ]
}

 The dataset includes 176 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018659-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8mv66
title: Occurrence Download

description: A dataset containing 3875 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex duriuscula"
 ]
}

 The dataset includes 3875 records from 169 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018655-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qexr44
title: Occurrence Download

description: A dataset containing 15036 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Begomovirus"
 ]
}

 The dataset includes 15036 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009618-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.12631439.v1
title: Patient data_table1.xlsx

description: Anonymised patient data <br>
DOI: 10.6084/m9.figshare.19763044.v1
title: Integrated modeling framework for sustainable agricultural intensification

description: Literature reviews focused on representing the most influential knowledge about agricultural interventions. We identify the most cited 50 publications and the most relevant 50 papers of the last 5 years using the methodology of Nagendra et al. (2018). <br> <br> Files include: <br> - References - Database - Methods <br>
DOI: 10.6084/m9.figshare.26819929.v3
title: Third party imitation is not restricted to humans

description: Third party imitative learning of intransitive actions in macaws
DOI: 10.6084/m9.figshare.7956038.v1
title: Supplementary Figure 10 Biolayer interferometry (BLI) binding profiles of AtzC wildtype SH2 fusion (AtzC9 wtSH2) and AtzC superbinder SH2 fusion (AtzC-SH2) to phosphorylated SH2 binding peptide AtzA fusion (pY-AtzA)

description: Article: Stimulus-responsive Self-Assembly of Protein-Based Fractals by Computational Design Pre-print: bioRxiv 274183; doi: https://doi.org/10.1101/274183 Figure: S10. Biolayer interferometry (BLI) binding profiles of AtzC wildtype SH2 fusion (AtzC9 wtSH2) and AtzC superbinder SH2 fusion (AtzC-SH2) to phosphorylated SH2 binding peptide AtzA fusion (pY-AtzA). (A) Binding profile of AtzC-wtSH2 to pY-AtzA. PY-AtzA was loaded onto the biosensor via a streptavidin-biotin interaction. AtzC-wtSH2 was flowed into the sample. KD = 41.79 ± 0.32 nM. (B) Binding profile of AtzCM1 (superbinder) to pY-AtzA. PY AtzA was loaded onto the biosensor via a streptavidin-biotin interaction. AtzC-SH2 was flowed into the sample. KD = 7.67 ± 0.52 nM. Comment. KD was calculated using ForteBio BLItz software. KD statistical analysis provided in datafile. (SI 2.8) Bio-layer interferometry (BLI) – AtzAM1 was phosphorylated using the conditions described below. pY-AtzAM1 was then biotinylated at 10mM Sulfo-NHS-Biotin (APExBIO) for 30min at 25°C. Excess biotin was buffer exchanged with a PD-10 desalting column (GE Healthcare) equilibrated with HNG. Biotinylated pY-AtzAM1 was loaded onto streptavidin (SA) coated biosensors (ForteBio) and used for BLI. AtzCM1 was flowed in from 4nM to 4μM. BLI experiments were performed using the BLItz System (ForteBio).****Note: This work was part of the Rutgers Biomod 2016 Project (M. Liu, A. Permaul, O. Dineen, M. Khalid, M. Shea, G.L. Bilker). See reference below.
DOI: 10.6084/m9.figshare.23060354.v1
title: Centralia_multiyear_DNA_RNA

description: This is the processed data accompanying the seven year soil fire-affected, recovered, and reference soils over 7 years using amplicon sequencing of DNA and reverse transcribed RNA. We looked at the community structural dynamics and resilience of the communities to heat press disturbance. Included here are the post-processing data: <br> all_samples_16S_OTU.fasta: representative OTU sequences RNA_DNA_physeq.RDS: phyloseq object containing the OTU table, taxonomy table, phylogenetic tree, and metadata used in the analysis bNTI_R10K.txt: the output from the bNTI analysis RCbray_R10K.txt: the output from the RC-bray analysis HOBOxx-yy.xlsx: HOBO temperature monitor data for each year (xx = start year, yy = end year).
DOI: 10.6084/m9.figshare.1326728.v1
title: MAPK Data Set 2

description: Single cell flow cytometry data of PMA stimulated T cells.
DOI: 10.6084/m9.figshare.9724040.v1
title: Tthe typing of HLA alleles and KIR haplotype of each individual

description: Alleles of the 35 HLA loci across the 3.8-Mb HLA region and KIR haplotypes composed of centromeric and telomeric motifs in 18 patients with DSO and 18 healthy control subjects sampled across several hospitals in Japan
DOI: 10.6084/m9.figshare.16695130.v1
title: Supplemental Table S1

description: SARS-CoV-2 infection of iPSC-airway Table S1
DOI: 10.6084/m9.figshare.26247887.v1
title: Supplementary Material for: A Comparison of the Anticoagulation Efficacy and Safety of Epoprostenol to Heparin and Citrate in Children Receiving Continuous Renal Replacement Therapy

description: Introduction: Anticoagulants are used in continuous renal replacement therapy (CRRT) to prolong filter life. There are no prior investigations directly comparing epoprostenol to more commonly used forms of anticoagulation in children. Therefore, the primary aim of this study was to assess the efficacy and safety of epoprostenol as compared to heparin and citrate anticoagulation in a pediatric cohort.
Methods: We performed a retrospective analysis of all patients &lt;18 years of age admitted to an academic quaternary care children’s hospital from 2017-2022 who received epoprostenol, heparin, or citrate exclusively for CRRT anticoagulation. Efficacy was evaluated by comparing the hours to the first unintended filter change and the ratio of filters used to CRRT days. Safety was assessed by evaluating changes in platelet count and vasoactive-ionotropic score (VIS). 
Results: Of 101 patients, 44 received epoprostenol (43.6%), 38 received heparin (37.6%), and 19 received citrate (18.8%). The first filter change was more commonly planned in patients receiving anticoagulation with epoprostenol (43%) as compared to citrate (11%) or heparin (29%) (p=0.034). Of those patients where the first filter change was unintended (n=33), there were greater median hours until the filter was replaced in those receiving epoprostenol (29) when compared to citrate (21) (p=0.002) or heparin (18) (p=0.003). There was a smaller median ratio of filters used to days on therapy in the patients that received epoprostenol (0.53) when compared to citrate (1) (p=0.003) or heparin (0.75) (p=0.001). For those receiving epoprostenol, there was no significant decrease in platelet count when comparing values prior to CRRT initiation through 7 days of therapy. There was no significant difference in VIS when comparing values prior to CRRT initiation through the first 2 days of CRRT.
Conclusions: Epoprostenol-based anticoagulation is effective when compared to other anticoagulation strategies used in pediatric CRRT with a favorable side effect profile.
DOI: 10.6084/m9.figshare.28645094.v1
title: Interview transcripts: Evaluating The Sustainability of Small, Medium and Micro Enterprises Funding Through Tender Subcontracting in The City of Cape Town Infrastructure Department

description: This study investigates the sustainability of subcontracting within Cape Town's infrastructure sector from 2019 to 2023. Qualitative case study research involved interviews with 10 project managers and 36 Small, Medium and Micro Enterprises (SMMEs) to gain insights into subcontracting sustainability
DOI: 10.6084/m9.figshare.104617.v1
title: Networks Dataset

description: Network datasets and meta data using in work which develops a new model of spatial network structure: http://arxiv.org/abs/1210.4246
DOI: 10.6084/m9.figshare.23258564.v1
title: Supplementary Material for: Relationship between dialysate bicarbonate concentration and all-cause mortality in hemodialysis patients

description: Introduction: The optimal dialysate bicarbonate concentration (DBIC) for hemodialysis (HD) remains controversial. Herein, we analyzed the effect of dialysate bicarbonate levels on mortality in hemodialysis patients. 
Methods: Patients undergoing maintenance hemodialysis were recruited from the hemodialysis unit of the Daping Hospital. Patients were categorized into quartiles according to their DBIC level (quartile 1: &lt;31.25 mmol/L, n=77; quartile 2: 31.25–32.31 mmol/L, n=76; quartile 3: 32.31–33.6 mmol/L; n=81; quartile 4: ≥33.6 mmol/L, n=79). Demographic and clinical data were collected. Survival curves were estimated using the Kaplan–Meier method. A Cox proportional hazards regression model was used to estimate the association between DBIC and all-cause mortality. 
Results: We included 313 patients undergoing maintenance HD with a mean DBIC of 32.16±1.59 mmol/L (range, 27.20–34.72 mmol/L). The patients in quartile 4 were more likely to have higher pre- and post-hemodialysis serum bicarbonate concentrations than those in other quartiles. The mortality rate was lowest in quartile 2 (10.53%). The survival time was significantly lower in the quartile 4 group than in the other quartiles (p=0. 008, log-rank test). After full adjustment, the hazard ratio (per 3 mmol/L higher DBIC) for all-cause mortality was 4.29 (95% confidence interval, 2.11–8.47) in all patients, whereas no significant association was observed between DBIC and initial hospitalization.
Conclusions: Our data indicate that DBIC is positively associated with all-cause mortality. A DBIC concentration of 31–32 mmol/L may benefit patient outcomes. This study provides an evidence-based medical basis for optimal dialysis prescription in the future.
DOI: 10.6084/m9.figshare.22661803.v5
title: Anterior cingulate cortex orexin signaling mediates early-life stress-induced social impairment in females

description: female SFR (4 replicates) vs female MS (3 replicates)
DOI: 10.6084/m9.figshare.28789508.v1
title: Sex determination from hand dimensions in the Indian Population.xlsx

description: This study aims to analyse the role of various hand dimensions such as hand length, hand breadth, and index finger length in determining sex in the North and South Indian populations.
DOI: 10.6084/m9.figshare.7742948.v1
title: stringtie_merged.strand.lncRNA.proteincoding.fa

description: Transcirpt sequence for lncRNA and protein-coding genes assembled in 37 samples (fasta format)
DOI: 10.6084/m9.figshare.21740597.v1
title: The Psychometric Properties of the Sharenting Evaluation Scale (SES) using Online Platforms: a Study of an Iranian Sample

description: Data set is available for all
DOI: 10.6084/m9.figshare.28013666.v1
title: <b>Trends, key contributors, and emerging issues in honey and breast cancer: A bibliometric analysis from 2014 to </b><b>2024</b>

description: This study examined the relationship between honey and breast cancer. The researchers analyzed scientific publications from 2014 to 2024 to understand research trends, researcher collaborations, and key topics studied. The results showed that honey has potential as a natural agent for preventing and treating breast cancer. The study also investigated several promising areas of research, such as the use of cerium oxide nanoparticles and selenium nanoconstructs. However, further research is needed to fully understand the potential and safety of honey in breast cancer treatment.
DOI: 10.6084/m9.figshare.11436879.v1
title: dbPSP 2.0, an updated database of protein phosphorylation sites in prokaryotes

description: This file contains the datasets of phosphorylation sites in prokaryotes.
DOI: 10.6084/m9.figshare.28777973.v1
title: XuEtAl2025_Sarax5genesAnalysis.zip

description: A new species of the whip spider genus<i> Sarax </i>Simon, 1892 from Yunnan Province, China is described: <i>S. yunnan</i> Xu, Yu & F. Zhang <b>sp. nov.</b>, which is now the second <i>Sarax</i> species known only from China. The systematic position of <i>S. yunnan</i> <b>sp. nov. </b>was tested through phylogenetic analysis based on newly sequenced genes (18S, 28S and <i>COI</i>) and datasets of previous studies; like <i>Sarax sinensi</i>s Wu<i> et al</i>., 2022, <i>Sarax yunnan</i> <b>sp. nov.</b>, belongs to the West Asian Clade of <i>Sarax</i>.
DOI: 10.6084/m9.figshare.11496819.v1
title: Habitat Suitability Model for American Bittern

description: Raster model of breeding habitat suitability for American Bitterns within the contiguous U.S. Model development described by Stevens and Conway (2020).<br> These data are supplemental materials for the following manuscript: <br> Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.6084/m9.figshare.23994480.v1
title: dataset2_Train_Negatives_All.dat

description: This dataset contains negative samples from which random samples were used to train the PepCNN model for Dataset2
DOI: 10.6084/m9.figshare.25018664.v1
title: Bacterial mzML files

description: Mzml files