cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15454/jla1a0
title: Genome-wide evolutionary response of European oaks during the Anthropocene - Supporting Information

description: Supporting information to the article from Saleh et al. 2021 published in Evolution Letters: "Genome-wide evolutionary response of European oaks during the Anthropocene". These data were required to assess allelic frequencies of SNPs in age structured cohorts of Quercus petraea. Whole genome pool sequences of 40 and 68 trees per cohort were used for assessing allelic frequencies. A total of 348,863,070 reads per pool were mapped onto the v2.3 Q. robur genome assembly using bwa-mem. Incorrectly paired reads and reads giving multiple alignments were removed with samtools. Duplications were removed with Picard tools. Pileup files were generated for each scaffold over all forests, with samtools. These 1,337 pileup files correspond to the pileups for 1,337 oak scaffolds.
DOI: 10.25625/mpr46w/iwvm2f
title: Table S2.tab

description: Detailed Ar/Ar methodology and results
DOI: 10.25625/mpr46w/d2jsn5
title: Table 1.tab

description: Bulk rock analyses of Harrat Uwayrid basalts. Major oxides are in wt % while minor elements are in ppm
DOI: 10.25625/mpr46w/ralh5k
title: Table 2.tab

description: EPMA analyses of olivine and clinopyroxene mineral compositions. Data presented in wt% (bdl = below detection limit).
DOI: 10.25625/mpr46w/71j9hs
title: Table 3.tab

description: Clinopyroxene trace element chemistry as determined by LA-ICP-MS. Data are in ppm (bdl = below detection limit).
DOI: 10.25625/mpr46w/wcyrla
title: Table 4.tab

description: Summary 40Ar/39Ar Geochronology of Harrat Uwayrid Lavas
DOI: 10.25625/mpr46w
title: Geodynamic controls on basaltic volcanism in the Arabian Peninsula: Evolution of Harrat Uwayrid, Saudi Arabia.

description: Bulk rock, LA-ICP-MS, Argon, and EPMA data used in "Geodynamic controls on basaltic volcanism in the Arabian Peninsula: Evolution of Harrat Uwayrid, Saudi Arabia."
DOI: 10.25625/mpr46w/cxsvb9
title: Table S1.tab

description: Standard values and detection limits.
DOI: 10.15468/dl.5zp3ph
title: Occurrence Download

description: A dataset containing 1035 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-2.46135 50.49451,-2.37224 50.59462,-2.11907 50.57774,-1.9653 50.53461,-1.75617 50.73895,-1.79461 50.91523,-1.95214 50.99681,-2.10498 50.95836,-2.17249 51.02119,-2.19687 51.06994,-2.28782 51.08213,-2.34033 51.07932,-2.35346 51.03619,-2.39565 50.99212,-2.34971 50.98274,-2.45379 50.95742,-2.49129 50.99774,-2.54568 51.00337,-2.55599 50.99118,-2.6657 50.94711,-2.97438 50.84924,-2.92121 50.72992,-2.68966 50.68621,-2.53608 50.61533,-2.46135 50.49451))",
 "TaxonKey is Cuculus canorus Linnaeus, 1758",
 "Year 1990-2024"
 ]
}

 The dataset includes 1035 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030454-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5drn5h
title: Occurrence Download

description: A dataset containing 2014480 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 50",
 "Geometry POLYGON((-81.5396697749999 36.774159936,-75.0394799929999 36.774159936,-75.0394799929999 41.704079994,-81.5396697749999 41.704079994,-81.5396697749999 36.774159936))"
 ]
}

 The dataset includes 2014480 records from 258 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030445-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zt9a5v
title: Occurrence Download

description: A dataset containing 28021 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "TaxonKey is Scyphozoa",
 "Year 2000-2020"
 ]
}

 The dataset includes 28021 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030455-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17631/rd-2024-0012-ddat
title: Adolescents, sexting and consent; a discursive approach.
DOI: 10.15468/dl.4zdmd2
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 {
 "or" : [
 "Geometry POLYGON((0 0,88.297 0,88.297 21.574,0 21.574,0 0))",
 "Geometry POLYGON((0 0,39.00746 0,88.307 0,88.307 21.584,0 21.584,0 0))",
 "Geometry POLYGON((88.287 21.564,88.307 21.564,88.307 21.584,88.287 21.584,88.287 21.564))"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lumnitzera racemosa Willd."
 ]
}

 The dataset includes 41 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030456-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e208021v1
title: NYU Science & Religion Survey

description: The NYU Science & Religion Survey is a nationally representative survey conducted by NORC using their AmeriSpeak Panel. The survey focuses on Americans' attitudes towards science and religion both broadly and in regards to specific government policies. A series of questions explores Americans' discussion networks for topics related to science and religion. Additional variables ask about respondents' political views, demographic characteristics and use of various social media platforms.
description: WEIGHT1 is a weight variable that is weighted to the general population and should be used for most analyses. Additional information about alternative weights can be found in the codebook.
description: Presence of Common Scales: The variable OCCUPY20_CODED uses the 2018 Standard Occupational Classification. Throughout the survey, several Likert-type scales were used. Each is described in the codebook.
description: The sample was selected from the AmeriSpeak Panel using sampling strata based on religion, age, race/Hispanic ethnicity, education, and gender (48 sampling strata in total). The size of the selected sample per sampling stratum was determined by the population distribution for each stratum. In addition, sample selection took into account expected differential survey completion rates by demographic groups so that the set of panel members with a completed interview for a study is a representative sample of the target population. If a panel household has one more than one active adult panel member, only one adult in the household is eligible for selection (random within-household sampling). Panelists selected for an AmeriSpeak study earlier in the business week are not eligible for sample selection until the following business week.
description: General non-institutionalized US population, age 18+, limited to English and Spanish speakers.
description: telephone interview; web-based survey;
DOI: 10.3886/e208021
title: NYU Science & Religion Survey

description: The NYU Science & Religion Survey is a nationally representative survey conducted by NORC using their AmeriSpeak Panel. The survey focuses on Americans' attitudes towards science and religion both, including items about confidence, identities, and policy preferences. A series of questions explores Americans' discussion networks for topics related to science and religion. Another set asks church-goers about actions (if any) their church took in response to the COVID pandemic. Additional variables ask about respondents' political views, demographic characteristics and use of various social media platforms.<br><br>
description: WEIGHT1 is a weight variable that is weighted to the general population and should be used for most analyses. Additional information about alternative weights can be found in the codebook.
description: Presence of Common Scales: The variable OCCUPY20_CODED uses the 2018 Standard Occupational Classification. Throughout the survey, several Likert-type scales were used. Each is described in the codebook.
description: The sample was selected from the AmeriSpeak Panel using sampling strata based on religion, age, race/Hispanic ethnicity, education, and gender (48 sampling strata in total). The size of the selected sample per sampling stratum was determined by the population distribution for each stratum. In addition, sample selection took into account expected differential survey completion rates by demographic groups so that the set of panel members with a completed interview for a study is a representative sample of the target population. If a panel household has one more than one active adult panel member, only one adult in the household is eligible for selection (random within-household sampling). Panelists selected for an AmeriSpeak study earlier in the business week are not eligible for sample selection until the following business week.
description: General non-institutionalized US population, age 18+, limited to English and Spanish speakers.
description: telephone interview; web-based survey;
DOI: 10.3886/e208021v2
title: NYU Science & Religion Survey

description: The NYU Science & Religion Survey is a nationally representative survey conducted by NORC using their AmeriSpeak Panel. The survey focuses on Americans' attitudes towards science and religion both, including items about confidence, identities, and policy preferences. A series of questions explores Americans' discussion networks for topics related to science and religion. Another set asks church-goers about actions (if any) their church took in response to the COVID pandemic. Additional variables ask about respondents' political views, demographic characteristics and use of various social media platforms.<br><br>
description: WEIGHT1 is a weight variable that is weighted to the general population and should be used for most analyses. Additional information about alternative weights can be found in the codebook.
description: Presence of Common Scales: The variable OCCUPY20_CODED uses the 2018 Standard Occupational Classification. Throughout the survey, several Likert-type scales were used. Each is described in the codebook.
description: The sample was selected from the AmeriSpeak Panel using sampling strata based on religion, age, race/Hispanic ethnicity, education, and gender (48 sampling strata in total). The size of the selected sample per sampling stratum was determined by the population distribution for each stratum. In addition, sample selection took into account expected differential survey completion rates by demographic groups so that the set of panel members with a completed interview for a study is a representative sample of the target population. If a panel household has one more than one active adult panel member, only one adult in the household is eligible for selection (random within-household sampling). Panelists selected for an AmeriSpeak study earlier in the business week are not eligible for sample selection until the following business week.
description: General non-institutionalized US population, age 18+, limited to English and Spanish speakers.
description: telephone interview; web-based survey;
DOI: 10.6084/m9.figshare.26336884
title: Dataset: Effects of the presence of heterospecifics and simulated drying on life history and behavioral traits in newt larvae and juveniles

description: We tested predictions about life-history variation based on the differing thermal sensitivities of differentiation and growth rates. Using a mesocosm experiment, we exposed larvae of two sympatric newt species, Ichthyosaura alpestris and Lissotriton vulgaris, to combinations of a biotic factor (the presence of heterospecifics) and an abiotic factor (simulated drying). We examined the impact of multiple stressor combinations on larval life history traits and juvenile exploration. The dataset consists of five files.<br>
DOI: 10.25345/c56h4d24v
title: MassIVE MSV000095387 - GNPS - Bolnick Alaska Experimental Evolution (2023)
title: Livers preserved in Ethanol from threespine stickleback (Gasterosteus aculeatus). Thirty per lake from 16 lakes in Alaska. Seven of the lakes are native populations, and nine of the lakes are experimentally introduced populations founded in 2019. Samples were collected by Dan Bolnick and colleagues in June 2023. Untargeted LC-MS/MS acquisition was performed on a Vanquish Flex UHPLC system coupled to an Orbitrap Exploris 240 (Thermo Fisher Scientific, Bremen, Germany). Chromatographic separation was performed on a Kinetex 2.6 um 100 A pore size Polar C18 reversed phase UHPLC column 100 x 2.1 mm (Phenomenex, Torrance, CA).
DOI: 10.5281/zenodo.12784456
title: flood modeling datas for Catastrophic outburst floods along the middle Yarlung Tsangpo River:  responses to coupled fault and glacial activity on the southern Tibetan Plateau
DOI: 10.5281/zenodo.12784457
title: flood modeling datas for Catastrophic outburst floods along the middle Yarlung Tsangpo River:  responses to coupled fault and glacial activity on the southern Tibetan Plateau
DOI: 10.15468/dl.zrxvqt
title: Occurrence Download

description: A dataset containing 28021 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "TaxonKey is Scyphozoa",
 "Year 2000-2020"
 ]
}

 The dataset includes 28021 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030457-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12700677
title: I/O Behind the Scenes [Data Set]

description: This file contains the data set from the paper: "I/O Behind the Scenes: Bandwidth Requirements ofHPC Applications With Asynchronous I/O," which was accepted at the Cluster 2024.

The Instructions are provided in the TMIO GitHub: https://github.com/tuda-parallel/TMIO/tree/main/artifacts/cluster24


 

After extracting data.zip, the folder named data has the following structure:



data└─── application_traces    ├── HACC-IO    │   ├── 1536    │   ├── 9216    │   └── time_distribution    └── WACOM++        ├── 9216_nolimit        ├── 9614_limit        ├── 96_limit        ├── 96_nolimit        └── time_distribution
DOI: 10.5281/zenodo.12700678
title: I/O Behind the Scenes [Data Set]

description: This file contains the data set from the paper: "I/O Behind the Scenes: Bandwidth Requirements ofHPC Applications With Asynchronous I/O," which was accepted at the Cluster 2024.

The Instructions are provided in the TMIO GitHub: https://github.com/tuda-parallel/TMIO/tree/main/artifacts/cluster24


 

After extracting data.zip, the folder named data has the following structure:



data└─── application_traces    ├── HACC-IO    │   ├── 1536    │   ├── 9216    │   └── time_distribution    └── WACOM++        ├── 9216_nolimit        ├── 9614_limit        ├── 96_limit        ├── 96_nolimit        └── time_distribution
DOI: 10.15468/dl.84ew3q
title: Occurrence Download

description: A dataset containing 8630 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 8630 records from 272 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030458-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kwxctw
title: Occurrence Download

description: A dataset containing 845 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Luidia senegalensis (Lamarck, 1816)"
 ]
}

 The dataset includes 845 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030459-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26336944.v1
title: Veitch - Red Squirrel Parasite Co-Occurrence Data.csv

description: Parasite species interactions, host biology traits, and external environmental factors can drive co-occurrence patterns between parasite species.We investigated co-occurrence patterns between three ectoparasite species (mite (<i>Neotrombicula harperi</i>), and fleas (<i>Orchopeas caedens</i>, and <i>Ceratophyllus vison)</i>) of North American red squirrels (<i>Tamiasciurus hudsonicus</i>). We evaluated (1) whether ectoparasites of red squirrels exhibit non-random co-occurrence patterns, and (2) the contribution of host and external environmental factors to parasite co-occurrence.Bayesian ordination and regression analysis (boral) revealed random associations between parasite species pairs when accounting for host and external environmental factors. However, the <i>Neotrombicula </i>mite exhibited a negative association with the <i>Orchopeas </i>flea and positive association with the <i>Ceratophyllus</i> flea linked to temporal patterns of occurrence.Our data suggest that parasites of the investigated population of red squirrels tend to form associations based on temporal trends in infestation rather than species interactions. Further experimentation should investigate the role of additional factors on parasite co-occurrence patterns, such as temperature, precipitation, and humidity.
DOI: 10.6084/m9.figshare.26336944
title: Veitch - Red Squirrel Parasite Co-Occurrence Data.csv

description: Parasite species interactions, host biology traits, and external environmental factors can drive co-occurrence patterns between parasite species.We investigated co-occurrence patterns between three ectoparasite species (mite (<i>Neotrombicula harperi</i>), and fleas (<i>Orchopeas caedens</i>, and <i>Ceratophyllus vison)</i>) of North American red squirrels (<i>Tamiasciurus hudsonicus</i>). We evaluated (1) whether ectoparasites of red squirrels exhibit non-random co-occurrence patterns, and (2) the contribution of host and external environmental factors to parasite co-occurrence.Bayesian ordination and regression analysis (boral) revealed random associations between parasite species pairs when accounting for host and external environmental factors. However, the <i>Neotrombicula </i>mite exhibited a negative association with the <i>Orchopeas </i>flea and positive association with the <i>Ceratophyllus</i> flea linked to temporal patterns of occurrence.Our data suggest that parasites of the investigated population of red squirrels tend to form associations based on temporal trends in infestation rather than species interactions. Further experimentation should investigate the role of additional factors on parasite co-occurrence patterns, such as temperature, precipitation, and humidity.
DOI: 10.48659/h0mn-nb97
title: Philadelphia Inventories of Estate 1746-1775

description: PHILADELPHIA INVENTORIES of Estate, 1746-1775 (Project 45). Value of Estates. Source: Inventories of Estate for Philadelphia, Philadelphia City Archives.


This dataset is a part of the Magazine of American Datasets (MEAD). To view more of the collection, visit https://repository.upenn.edu/exhibits/orgunit/mead.
DOI: 10.5281/zenodo.12784923
title: [CCS24] ASLR Dataset
DOI: 10.5281/zenodo.12784924
title: [CCS24] ASLR Dataset
DOI: 10.5066/p1tpjza9
title: Apollo 16 Training Schedule- 19711230

description: Apollo 16 geology training schedule for January, 1972.
DOI: 10.6084/m9.figshare.26324275.v1
title: <b>Coastal wetlands in the world’s major river deltas</b>

description: Coastal wetlands in the world’s major river deltas
DOI: 10.15468/dl.r6kfgb
title: Occurrence Download

description: A dataset containing 8630 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 8630 records from 272 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030460-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c52v2cn4h
title: MassIVE MSV000095388 - Targeted SuFEx-mediated covalent modification of a tyrosine residue in the catalytic pocket of tyrosyl-DNA phosphodiesterase 1
title: Developing effective inhibitors of the DNA repair enzyme tyrosyl-DNA phosphodiesterase 1 (TDP1) is complicated by the shallow catalytic pocket and the difficulties of overcoming binding interactions of substrate. Recently, we discovered a quinolone-binding hot spot in TDP1s active site proximal to the evolutionary conserved Y204 and F259 residues that position DNA. Sulfur (VI) fluoride exchange (SuFEx) is a biocompatible click chemistry reaction that enables acylation of protein residues, including tyrosine. Selective protein modifications can provide valuable insights into the biological roles of proteins and inform ligand design. As we report herein, we used SuFEx chemistries to prepare several covalent TDP1-bound binders showing site-specific covalent bonds with Y204. Our work presents the first application of SuFEx chemistries to TDP1-binding ligands. It validates the ability to covalently modify specific TDP1 residues by designed targeting. Adding this capability to the chemical biology toolbox of resources for studying TDP1 could have far reaching consequences.
DOI: 10.15468/dl.6r9jkz
title: Occurrence Download

description: A dataset containing 999 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Magnolia liliifera (L.) Baill."
 ]
}

 The dataset includes 999 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030461-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p138oms5
title: Proposed Apollo 17 geology field trip schedule-19711203
DOI: 10.13012/b2idb-8851803_v1
title: SBKS - Celllines Raw Entity Mentions

description: A set of cell-line entity mentions derived from an NERC dataset analyzing 900 synthetic biology articles published by the ACS. This data is associated with the Synthetic Biology Knowledge System repository (https://web.synbioks.org/). The data in this dataset are raw mentions from the NERC data.
DOI: 10.13012/b2idb-2910468_v1
title: SBKS - Chemical Ambiguous Entity Mentions

description: Related to the raw entity mentions (https://doi.org/10.13012/B2IDB-4163883_V1), this dataset represents the effects of the data cleaning process and collates all of the entity mentions which were too ambiguous to successfully link to the ChEBI ontology.
DOI: 10.13012/b2idb-3887275_v1
title: SBKS - Genes Raw Entity Mentions

description: A set of gene and gene-related entity mentions derived from an NERC dataset analyzing 900 synthetic biology articles published by the ACS. This data is associated with the Synthetic Biology Knowledge System repository (https://web.synbioks.org/). The data in this dataset are raw mentions from the NERC data.
DOI: 10.13012/b2idb-4163883_v1
title: SBKS - Chemical Raw Entity Mentions

description: A set of chemical entity mentions derived from an NERC dataset analyzing 900 synthetic biology articles published by the ACS. This data is associated with the Synthetic Biology Knowledge System repository (https://web.synbioks.org/). The data in this dataset are raw mentions from the NERC data.
DOI: 10.13012/b2idb-4950847_v1
title: SBKS - Species Raw Entity Mentions

description: A set of species entity mentions derived from an NERC dataset analyzing 900 synthetic biology articles published by the ACS. This data is associated with the Synthetic Biology Knowledge System repository (https://web.synbioks.org/). The data in this dataset are raw mentions from the NERC data.