cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4121/ce413614-1c82-4e81-90c0-323aa7d2fabd
title: Data underlying the publication: Storm resilience of subtidal soft-bottom mussel beds: mechanistic insights, threshold quantification and management implications

description: In this study, centered on subtidal soft-bottom mussel beds, our aims are: <em>i</em>) to develop an effective methodology for continuously monitoring their dislodgement dynamics in-situ under (storm) waves; <em>ii</em>) to seek integrated experimental evidence for understanding the variability in their resistance and recovery under storm impacts and the associated driving mechanisms. <em>Firstly</em>, utilizing a novel method (i.e., Mussel Clump Accelerometer), we conducted continuous monitoring of mussel clump dislodgement throughout the storm season in a representative subtidal soft-bottom mussel habitat (i.e., the Dutch Wadden Sea) to quantify the associated dislodgement threshold. <em>Secondly</em>, employing a wave-generating flume, we investigated to what extent mussel clump dislodgement depends on recent life history and storm exposure duration. <em>Thirdly</em>, using wave-mimicked mesocosms, we conducted disturbance-recovery experiments to examine the effect of storm frequency on mussel bed recovery after dislodgement. <em>Finally</em>, we discussed the implications of our findings for advancing mussel bed resilience studies, as well as their relevance to mussel bed conservation and management.<br>These files include the data used to create each figure in the manuscript, organized as follows:<br>1. Field monitoring a)       Accelerometer b)       Pressure sensor 2. Flume study a)       Dislodgement test b)       Long exposure experiment For a complete description, see 'Data description.docx'<br><br>
DOI: 10.4121/ce413614-1c82-4e81-90c0-323aa7d2fabd.v1
title: Data underlying the publication: Storm resilience of subtidal soft-bottom mussel beds: mechanistic insights, threshold quantification and management implications

description: In this study, centered on subtidal soft-bottom mussel beds, our aims are: <em>i</em>) to develop an effective methodology for continuously monitoring their dislodgement dynamics in-situ under (storm) waves; <em>ii</em>) to seek integrated experimental evidence for understanding the variability in their resistance and recovery under storm impacts and the associated driving mechanisms. <em>Firstly</em>, utilizing a novel method (i.e., Mussel Clump Accelerometer), we conducted continuous monitoring of mussel clump dislodgement throughout the storm season in a representative subtidal soft-bottom mussel habitat (i.e., the Dutch Wadden Sea) to quantify the associated dislodgement threshold. <em>Secondly</em>, employing a wave-generating flume, we investigated to what extent mussel clump dislodgement depends on recent life history and storm exposure duration. <em>Thirdly</em>, using wave-mimicked mesocosms, we conducted disturbance-recovery experiments to examine the effect of storm frequency on mussel bed recovery after dislodgement. <em>Finally</em>, we discussed the implications of our findings for advancing mussel bed resilience studies, as well as their relevance to mussel bed conservation and management.<br>These files include the data used to create each figure in the manuscript, organized as follows:<br>1. Field monitoring a)       Accelerometer b)       Pressure sensor 2. Flume study a)       Dislodgement test b)       Long exposure experiment For a complete description, see 'Data description.docx'<br><br>
DOI: 10.15468/dl.fkeqhb
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aliterella vladivostokensis Sh.R.Abdullin, A.Yu.Nikulin, V.B.Bagmet & V.Yu.Nikulin, 2021"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033870-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27290265
title: SG_Raw_Data & Residual_Gravity_EQ

description: For SG raw data:<br>The first column represents the recorded voltage of the iGrav001 superconducting gravimeter. The second column represents the atmospheric pressure measurements. The last column represents the theoretical tide at the SG location.The rest of the columns represent the instrument's hardware system status.The ResidualGravity_EQ file contains residual gravity data about two hours before and after the EQ onsets, with a 1-sec sample rate.
DOI: 10.15468/dl.5pf4hw
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aphanizomenon balticum"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033871-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzjb63
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alkalinema pantanalense Vieira Vaz et al."
 ]
}

 The dataset includes 126 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033872-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/gou2vy
title: Appendix for “Support for Polyarchy in the Americas”

description: This document contains the appendix for “Support for Polyarchy in the Americas”, coauthored with Ryan Carlin.
DOI: 10.4121/c9592e56-9284-42ba-92b3-b6448e5beddb
title: Data presented in the paper "Unifying creep and fatigue modeling of composites: a time-homogenized micromechanical framework with viscoplasticity and cohesive damage".

description: Tex files containing data used for diagrams in the paper, plus pdf figures related to the model formulation, and svg figures from which pdf figures have been generated.
DOI: 10.7910/dvn/fjmvel
title: Appendix for “Context Counts: The Election Cycle, Development, and the Nature of Economic Voting.”

description: This is the web appendix for my paper “Context Counts: The Election Cycle, Development, and the Nature of Economic Voting," coauthored with Ryan Carlin
DOI: 10.4121/c9592e56-9284-42ba-92b3-b6448e5beddb.v2
title: Data presented in the paper "Unifying creep and fatigue modeling of composites: a time-homogenized micromechanical framework with viscoplasticity and cohesive damage".

description: Tex files containing data used for diagrams in the paper, plus pdf figures related to the model formulation, and svg figures from which pdf figures have been generated.
DOI: 10.7910/dvn/ahkhta
title: Appendix for "Does Increasing District Magnitude Increase the Number of Parties? Evidence from Spain, 1982-2011.”

description: This is the appendix for my paper "Does Increasing District Magnitude Increase the Number of Parties? Evidence from Spain, 1982-2011.”
DOI: 10.15468/dl.n8ytu9
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aphanizomenon flexuosum Komárek & Kovácik"
 ]
}

 The dataset includes 19 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033873-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27290307
title: Osmorespiration of marble goby under different background colors.

description: Osmorespiration of marble goby under different background colors.
DOI: 10.6084/m9.figshare.27290307.v1
title: Osmorespiration of marble goby under different background colors.

description: Osmorespiration of marble goby under different background colors.
DOI: 10.15468/dl.ysswgv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alpinella graeca Dragastan, Gieslich, D.K.Richter, Grewer, Kaziur, Kube & Radusch, 1994"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033874-241007104925546/datasets/export for details.
DOI: 10.7910/dvn/dkcfk0
title: coverletterf1000R

description: Coverletter
DOI: 10.7910/dvn/osipyl
title: Memorial de Jorge Leal Hanai

description: Imagens, arquivos pdf e docx usados no memorial do professor Jorge Leal Hanai
DOI: 10.15468/dl.3zeqrt
title: Occurrence Download

description: A dataset containing 4854 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aphanizomenon flosaquae Ralfs ex Bornet & Flahault"
 ]
}

 The dataset includes 4854 records from 136 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033875-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8x7eux
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alternella hyperboerica Raaben, 1972"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033876-241007104925546/datasets/export for details.
DOI: 10.15468/dl.2j3mnd
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 658 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033877-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nmku2a
title: Occurrence Download

description: A dataset containing 658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 658 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033878-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mn9ybf
title: Occurrence Download

description: A dataset containing 580 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aphanizomenon gracile Lemmerm."
 ]
}

 The dataset includes 580 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033879-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rpkx3m
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alternia silva Vologdin, 1962"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033880-241007104925546/datasets/export for details.
DOI: 10.15468/dl.65eqsb
title: Occurrence Download

description: A dataset containing 165872 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-96.25144 19.09337, -96.08149 19.09337, -96.08149 19.22562, -96.25144 19.22562, -96.25144 19.09337))",
 "Year is greater than or equal to 2013",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 165872 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033869-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13984926
title: Integrating AlphaFold pLDDT Scores into CABS-flex for Enhanced Protein Flexibility Simulations

description: Data created during research on: Integrating AlphaFold pLDDT Scores into CABS-flex for Enhanced Protein Flexibility Simulations.

 

Training_set_protein_chains.txt and Whole_set_protein_chains.txt have lists of all PDB ID and chain used.

Description_of_runs.csv has a list of every run tested. Run number correponds to csv file in Results_run.tar.gz.

Every csv file has following columns: 





PDB - PDB ID and chain 

Total_residues

%_C - Percent of secondary structure assigned as coil by DSSP

%_H - Percent of secondary structure assigned as helix by DSSP

%_E - Percent of secondary structure assigned as sheet by DSSP

%_T - Percent of secondary structure assigned as turn by DSSP

pLDDT_mean - Average pLDDT score across all residues

pLDDT_std - Standard deviation of pLDDT scores across all residues

Unique_restraints - Number of unique restraints created by CABS-flex

RMSF_CABS_R1_corr - RMSF correlation between CABS-flex and first MD simulation from ATLAS

RMSF_CABS_R2_corr - RMSF correlation between CABS-flex and second MD simulation from ATLAS

RMSF_CABS_R3_corr - RMSF correlation between CABS-flex and third MD simulation from ATLAS

Highest_RMSF_corr - Highest RMSF correlation out of three
DOI: 10.15468/dl.xy4fru
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aphanizomenon holsaticum Richter"
 ]
}

 The dataset includes 11 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033881-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13984745
title: Unveiling the Characteristics and Impact of Security Patch Evolution
DOI: 10.5281/zenodo.13984746
title: Unveiling the Characteristics and Impact of Security Patch Evolution
DOI: 10.15468/dl.awf6zv
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amazonocrinis nigriterrae"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033882-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5525/gla.researchdata.1792
title: The role of excitation vector fields and all-polarisation state control of cavity magnonics
DOI: 10.7910/dvn/uflqf6
title: Data Profiling of Expert Bouldering Routesetters

description: Profiling of Expert Bouldering Routesetters
DOI: 10.15468/dl.fzmcz5
title: Occurrence Download

description: A dataset containing 2555414 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Swiss National Butterflies and Forester Moths Databank"
 ]
}

 The dataset includes 2555414 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033867-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjqphq
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aphanizomenon hungaricum Komárk.-Legn. & Mátyás"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033883-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c7yg89
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ammatoidea murmanica Petrov"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033885-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xux8jh
title: Occurrence Download

description: A dataset containing 259884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Brachypodium pinnatum (L.) P.Beauv."
 ]
}

 The dataset includes 259884 records from 1638 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033866-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jpvdxj
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammillaria mercadensis Patoni",
 "Country is Mexico"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014059-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ys7cn6
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acacia plautella Maslin"
 ]
}

 The dataset includes 24 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006613-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fiul5e
title: Occurrence Download

description: A dataset containing 5494 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gambelia wislizenii Smith, 1946"
 ]
}

 The dataset includes 5494 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014059-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nef2wp
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynanchum radians (Forssk.) Lam."
 ]
}

 The dataset includes 74 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015129-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dv3gex
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eulophia corymbosa Schltr."
 ]
}

 The dataset includes 10 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048781-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.etk2vr
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Curcuma arida Škorničk. & N.S.Lý"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015134-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q21zop
title: Occurrence Download

description: A dataset containing 1264 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ctenosaura hemilopha (Cope, 1863)"
 ]
}

 The dataset includes 1264 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014060-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pkhb2s
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 5.86633",
 "DecimalLongitude is less than 5.86938955318439",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 16 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006608-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gtfqy5
title: Occurrence Download

description: A dataset containing 274 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Lygisaurus aeratus (Garman, 1901)"
 ]
}

 The dataset includes 274 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087724-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.18atrm
title: Occurrence Download

description: A dataset containing 6375 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senna obtusifolia (L.) H.S.Irwin & Barneby"
 ]
}

 The dataset includes 6375 records from 249 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014060-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.guvrrs
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acacia perpusilla Maslin, M.D.Barrett & R.L.Barrett"
 ]
}

 The dataset includes 14 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006522-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bmetmp
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Ameiva concolor Ruthven, 1924"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087781-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.72q1uy
title: Occurrence Download

description: A dataset containing 1717 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sauromalus obesus Baird, 1858"
 ]
}

 The dataset includes 1717 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014061-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.