cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17863/cam.34659
title: Research data supporting Coaxial Nickel-Poly (Vinylidene Fluoride Trifluoroethylene) Nanowires for Magnetoelectric Applications

description: These are vibrating sample magnetometry (VSM) measurement results for the different samples examined in the corresponding paper
DOI: 10.6084/m9.figshare.c.3619424_d3
title: Additional file 1: Table S1. of Infection with Plasmodium berghei ookinetes alters protein expression in the brain of Anopheles albimanus mosquitoes

description: Identification of differentially displayed proteins in Anopheles albimanus. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.c.3619418_d5
title: Additional file 8: of Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis â   a rich resource to identify new transcripts, proteins and to study gene regulation

description: Table S7 - Predicted RpoD-like promoters; Table S8 - Predicted promoters with similarity to promoters found upstream of leaderless transcripts; Table S9 - Predicted RpoN-like promoters. (XLS 2957 kb)
DOI: 10.6084/m9.figshare.c.3619415_d8
title: Additional file 7: of Translatomics combined with transcriptomics and proteomics reveals novel functional, recently evolved orphan genes in Escherichia coli O157:H7 (EHEC)

description: Overview of the machine learning results. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3619418_d6
title: Additional file 9: of Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis â   a rich resource to identify new transcripts, proteins and to study gene regulation

description: Table S10 - gTSSs with coinciding RpoD-like and RpoN-like promoters; Table S11 - gTSSs with multiple promoters. (XLS 138 kb)
DOI: 10.15468/dl.6e6qqw
title: Occurrence Download

description: A dataset containing 1549 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pongo pygmaeus (Linnaeus, 1760)"
 ]
}

 The dataset includes 1549 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033190-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.101690
title: Research data supporting "An Experimental Investigation into the Dimensional Quality of the Material Extrusion Additive Manufacturing Process" (B.5)

description: Zip folder containing two high speed camera video recordings (.mp4 files) underneath machine's build envelope showing deposition of single strands. Each video was filmed with a Chronos 1.4 high-speed camera from Kron Technologies which was positioned at 30 mm focal distance from the subject. The optical axis was carefully positioned underneath the printing direction. An aspect ratio of 1280 x 1024, frame rate of 1069 FPS, with an exposure time of 545 μs were used. The video recordings show the displacement angle and no displacement angle underneath Anet A8 machine’s build envelope relative to the nozzle orifice. Deposition was in the negative Y direction. The printing parameters used are shown below. PLA material, extruder temperature 200 deg, nozzle gap height 0.2 mm, print head velocity 10 mm/s.
DOI: 10.6084/m9.figshare.c.3619418_d7
title: Additional file 3: of Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis â   a rich resource to identify new transcripts, proteins and to study gene regulation

description: Table S3 listing all mapped TSSs; Table S4 listing previously published TSSs compared to our TSS mapping. (XLSX 1436 kb)
DOI: 10.6084/m9.figshare.c.3619433_d3
title: Additional file 1: of Efficient callus formation and plant regeneration are heritable characters in sugar beet (Beta vulgaris L.)

description: Dataset. (XLSX 37 kb)
DOI: 10.17863/cam.21666
title: Joint space mapping validation and reproducibility data

description: These data files provide the framework, thickness and thickness error values for 3D joint space mapping validation and reproducibility experiments.
DOI: 10.17863/cam.105797
title: Research data supporting "Physics-based Modeling for Hybrid Data Driven Models to Estimate SNR in WDM Systems"

description: The Excel file contains 7 sheets in total; they are associated to figures 2 to 7, and 9, respectively. The processed data was obtained by analysing 700 datapoints of 15 launch powers each, in addition to 700 datapoints of the corresponding resulting 15 SNR values after propagation in the experimental setup described in the paper. Sheet for Fig 2 contains the number of training datapoints and their corresponding overall root mean square error (RMSE) for each of the methods described in the paper. Sheet for Fig. 3. includes the SNR estimation error and their frequency of occurrence for each of the methods. Sheet for Fig 4 contains the average XPM and SPM values based on channel distance for each of the methods, and the values used for the plotting of the fit based on method 2. Sheet for Fig 5 contains the value of the per channel RMSE per method. Sheet for Fig 6 includes the per channel back to back SNR values computed from dividing the data into groups of 100 and applying each of the methods as described in the paper. Sheet for fig 7 contains the number of training datapoints and the corresponding RMSE for each of physical model 2, neural network (NN), and Gaussian process regression (GPR). Sheet for Fig 9 contains the number of training datapoints and the corresponding RMSE values for the GPR, and for the hybrid model when using 100 or 10 for the physical model part.
DOI: 10.17863/cam.37335
title: Research data supporting "Light-output enhancement of InGaN light emitting diodes regrown on nanoporous distributed Bragg reflector substrates"

description: This is data used to generate the figures contained in the associated publication. Data is related to the characterisation of light-emitting diodes regrown on nanoporous DBR templates, and includes I-V and L-I characteristics, emission spectra and micro-reflectivity spectra. It is stored in CSV format (comma-delimited, UTF-8, CR-LF line endings), with descriptive headers on the first row.
DOI: 10.6084/m9.figshare.c.3619451_d5
title: Additional file 4: of Cognition in chronic kidney disease: a systematic review and meta-analysis

description: Meta-analysis for eGFR 60. (XLSX 77.4 kb)
DOI: 10.6084/m9.figshare.c.3619364_d17
title: Additional file 11: Table S5. of Extracting a low-dimensional description of multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer

description: For five the most negatively correlated modules, the values of − log10 p from the pathway enrichment test (KEGG, Reactome, and BioCarta) (top) and from the TF binding enrichment test (bottom) are compared. For each of the five negatively correlated module pairs, we show five pathways and TFs that have the largest difference in the value of − log10 p between the two modules. (XLSX 10 kb)
DOI: 10.17863/cam.40297
title: Research data supporting Self-assembly of collagen bundles and enhanced piezoelectricity induced by chemical crosslinking

description: Raw QNM, KPFM and KPFM data files supporting Self-assembly of collagen bundles and enhanced piezoelectricity induced by chemical crosslinking. KPFM and PFM files of insoluble and soluble collagen, as well as crosslinked collagen on ITO coated glass. QNM files on ITO substrates on thin borosilicate glass.
DOI: 10.6084/m9.figshare.c.3619451_d7
title: Additional file 7: of Cognition in chronic kidney disease: a systematic review and meta-analysis

description: Meta-analysis for eGFR 15. (XLSX 37.2 kb)
DOI: 10.17863/cam.50425
title: Downloads of research data EMP STATUS BY SECTOR for BURGHS in Scotland 1851-1901 supporting “WP 26: Supplement to BBCE User Guide: Website definitions, downloads, Atlas of Entrepreneurship, and linkage to I-CeM”

description: BBCE data for entrepreneurs by sectors for Burghs in Scotland 1851-1901. Detailed definitions and method given in WP 6. The downloads include the total number of the economically active population from the BBCE broken down by sector, sex, for employers, own-account proprietors, and workers. All data are weighted for census non-response bias in 1891-1901.
DOI: 10.6084/m9.figshare.c.3619364_d19
title: Additional file 9: Table S4. of Extracting a low-dimensional description of multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer

description: The manually examined five histologic phenotypes for randomly selected 98 TCGA ovarian cancer patients with their TCGA patient IDs listed in Column A. The histologic phenotypes considered include percent stroma (Column B), percent tumor (Column C), vessel formation and abundance (Column D), stroma type (Column E), and invasion pattern (Column F). (XLSX 12 kb)
DOI: 10.15468/dl.5ffak9
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "Geometry POLYGON((-5.70341 36.06573,-5.69762 36.06621,-5.69477 36.06788,-5.69866 36.06866,-5.70341 36.06573))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 34 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033192-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.9130
title: CBR Leximetric Datasets [updated]

description: The CBR Leximetric Datasets are the product of work carried out at the Centre for Business Research (CBR) in Cambridge, beginning in 2005 when the Centre received funding from the Economic and Social Research Council to carry out a research project on law, development and finance. Further funding from the ESRC, the European Union's FP5 and FP6 programmes, the Isaac Newton Trust, the Cambridge Political Economy Society and the International Labour Organization made it possible to expand the original datasets to their current state. As of July 2016, there are three principal datasets, coding, respectively, for labour laws in 117 countries between 1970 and 2013 (the CBR Labour Regulation Index), shareholder protection in 30 countries between 1990 and 2013 (the CBR Extended Shareholder Protection Index), and creditor protection in 30 countries between 1990 and 2013 (the CBR Extended Creditor Protection Index). The coding of legal data is carried out using a so-called leximetric coding methodology developed in the CBR and more fully explained in the codebooks which accompany each of the datasets. Taken together, the datasets provide a unique time series which enables researchers and other research users to track changes in labour, company and insolvency law over long periods of time for many countries. A distinguishing feature of these datasets is that all legal sources for the data coding are fully described in the relevant codebooks, thereby assisting transparency, external validity and replicability of results. The work of further developing the datasets on shareholder and creditor rights, so that they match the labour regulation index in terms of years and countries covered, is ongoing.
DOI: 10.17863/cam.22130
title: Supporting data for: Submesoscale Rossby Waves on the Antarctic Circumpolar Current

description: Directory containing model source code, initial conditions and input files.
DOI: 10.17863/cam.82584
title: Research data supporting ''Modulating Drug Release from Short Poly(ethylene glycol) Block Initiated Poly(L-lactide) Di-Block Copolymers''

description: This Dataset relates to the paper investigating drug release from a novel series of mPEG-functionalised PLLA polymers whose individual components (PEG and PLLA) have regulatory FDA approval. Two processing methods were explored to understand their effect on the morphology and drug release profiles of the polymers, with and without mPEG functionalisation. In the first method the polymer and Propranolol.HCl drug powders were mixed together before injection moulding. In the second method, supercritical CO2 was used to mix the polymer and drug before injection moulding. When non- functionalised PLLA was processed through injection moulding alone, there were no signs of polymer-drug interaction, and the drug was confined to crystals on the surface. This resulted in up to 85 wt% burst release of propranolol.HCl after one day of incubation. By contrast, injection moulding of mPEG-functionalised polymers resulted in the partial dissolution of drug in the polymer matrix and a smaller burst (50 wt% drug) followed by sustained release. This initial burst release was completely eliminated from the profile of mPEG-functionalised polymers processed via supercritical CO2. The addition of mPEG facilitated the distribution of the drug into the bulk matrix of the polymer. Paired with supercritical CO2 processing, the drug release profile showed a slow, sustained release throughout the 4 months of the study.
DOI: 10.17863/cam.42389
title: Predicting physical properties of alkanes with neural networks dataset

description: Data for physical properties of alkanes used in the manuscript
DOI: 10.17863/cam.70019
title: Dataset for the paper "Associations between Maternal Iron Supplementation in Pregnancy and Changes in Offspring Size at Birth Reflect those of Multiple Micronutrient Supplementation"

description: Dataset used for the paper "Associations between Maternal Iron Supplementation in Pregnancy and Changes in Offspring Size at Birth Mirror and Attenuate those of Multiple Micronutrient Supplementation" published in Nutrients and containing data from the Cambridge Baby Growth Study. Uncompressed Microsoft 2013 (.xlsx) file (986 rows including header; 72 columns for standard association analysis) containing data relevant to the publication collected as part of the Cambridge Baby Growth Study (data collection 2001-2009). All the study participants were recruited from pregnancy clinics at the Rosie Maternity Hospital, Cambridge (2001-2009) around week 12 of pregnancy (at booking clinics). Maternal iron, folic acid and multiple micronutrient supplementation in pregnancy, anaemia in pregnancy and maternal pre-pregnancy weight and height were self-reported and collected as part of pregnancy questionnaires. Blood pressure readings, diagnoses of pre-eclampsia and offspring birth weight and gestational age at birth were collected from hospital notes. Gestational hypertension was defined as either systolic blood pressure &gt;=140 mmHg or diastolic blood pressure &gt;=90 mmHg in any of the blood pressure readings or was recorded from the hospital notes. All other assessments of the baby’s size and adiposity at birth (including the measurement of skinfold thicknesses) were made by trained paediatric research nurses. Gestational diabetes was defined using 75g oral glucose tolerance tests around week 28 of pregnancy and International Association of Diabetes in Pregnancy Study Group criteria. Missing data are presented as empty cells. For further information about the study please contact Dr. Clive Petry (email: cjp1002@cam.ac.uk; Department of Paediatrics, Box 116, Addenbrooke's Hospital, Cambridge Biomedical Campus, Hills Road, Cambridge CB2 0QQ, U.K.).
DOI: 10.17863/cam.68278
title: Research data supporting "Universal Digital Twin – Land Use"

description: Detailed description about how to create a customised vocabulary and data type in Blazegraph to upload UK land use data to the JPS knowledge graph.
DOI: 10.17863/cam.85284
title: Research data supporting "VRAI-Selectivity: Calculation of Selectivity Beyond Transition State Theory"

description: 3D coordinates of the geometries optimised for VRAI-Selectivity Python code development. Please see README.txt file for the details
DOI: 10.17863/cam.82737
title: Research data supporting "Hilton et al., Reactivity to conditioned threat cues is distinct from exploratory drive in the elevated plus-maze"

description: To better characterize potential impacts of prior aversive experience on EPM performance a series of experiments were carried out that systematically varied the time since stimulus presentation and the modality of the conditioning stimulus. Furthermore, we examined whether the EPM measurements taken days before or after threat conditioning measurements held any relationship. MATERIALS AND METHODS: Subjects. Subjects were 104 adult male Lister-Hooded rats (Charles River and Envigo, UK) weighing approx. 250–300g at the start of experiments. All animals were housed in groups of four per cage and kept under a reversed 12 h light/dark cycle (lights off 07:00 h until 19:00 h) and were provided with food and water ad libitum, except for during behavioral procedures, which were conducted during the rats’ dark cycle. The rats were randomly assigned to each group and experimenters were blind to group allocation for subsequent analysis. This research was conducted on Project Licence 70/7548 and has been regulated under the Animals (Scientific Procedures) Act 1986 Amendment Regulations 2012 following ethical review by the University of Cambridge Animal Welfare and Ethical Review Body (AWERB). See materials and methods for full details.
DOI: 10.17863/cam.112981
title: Research data supporting additional tests in "Machine learning to extract information from noise: application to concrete and cancer detection"

description: The data here supports additional tests that are described in "Machine learning to extract information from noise: application to concrete and cancer detection" thesis. The chapter of the thesis where the tests are described constitutes work done in "Unveil the unseen: exploit information hidden in noise" paper, which is part of the thesis. Data supporting additional scale/shift tests for extrapolation and data supporting tests with Cauchy, uniform, and exponential distributions. Files that end with '_train' correspond to training data, files that end with '_test' correspond to test data. 1) Files 'extrapolation_using_intermediate_train' and 'extrapolation_using_intermediate_test' correspond to the non-scaled, non-shifted dataset. Files that have 'scaled'/'shifted' in their name correspond to scaled and shifted data respectively. 2) Files that start with 'Cauchy', 'uniform', and 'exponential' correspond to additional tests on Cauchy, uniform, and exponential distributions respectively.
DOI: 10.17863/cam.17330
title: Research data supporting A quantum light emitting diode for the standard telecom window around 1550 nm

description: Research data supporting the conclusions drawn in the manuscript. Project relates to the measurement of entanglement from an LED emitting in the telecom C-band. Data was recorded using the methods outlined in the manuscript.
DOI: 10.17863/cam.52565
title: Dielectric response with short-ranged electrostatics (data set)

description: See README file for a detailed description of this dataset. This directory contains the LAMMPS input files, both with Ewald sums and LMFT. There are two subdirectories: 'BulkResponse' – Simulations of bulk liquid water; 'Slab' – Simulations for water confined between hydrophobic walls.
DOI: 10.60656/6a3e96febca4477b
title: Custom collection of categorize, classification, drizzle, droplet effective radius, ice effective radius, and 2 other products from Lindenberg on 18 Oct 2024
DOI: 10.6084/m9.figshare.c.3619484_d11
title: Additional file 12: of Transcript profiling for early stages during embryo development in Scots pine

description: Differentially expressed transcripts (FC &gt; 2; RPKM &gt; 10) between consecutive megagametophyte developmental stages. Only DETs with positive matches against TAIR database are included. Transcript name (Transcript ID), fold-change (FC), expression values at each megagametophyte developmental stage (RPKM) and the best match against TAIR database (At locus ID, At name, At annotation) are shown. Transcripts GO annotated for developmental biological process are coloured in red or green, in the up- or down-regulated lists, respectively. All transcripts GO annotated for response to stimulus and stress are highlighted in bold. (PDF 12.2 kb)
DOI: 10.6084/m9.figshare.c.3619511_d3
title: Additional file 5: of Transcriptome analysis revealed that a quorum sensing system regulates the transfer of the pAt megaplasmid in Agrobacterium tumefaciens

description: Differentially expressed genes. Xlsx. Four repeats are show for the mutant strain P4cinI (col. B to E) with repetition numbers (e.g. rep1_cinI) and three repeats for the wild type strain P4 (col. F to H), also with repetition numbers (e.g. rep1_P4). Average values are given for the mutant strain P4cinI (col. I) and the wild type strain P4 (col. J). Fold change and Log2 fold change are also shown (col. K and L) along with the raw p values and adjusted p values (col. M and N). (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.c.3619484_d12
title: Additional file 5: of Transcript profiling for early stages during embryo development in Scots pine

description: Differentially expressed transcripts in embryos and megagametophytes at different stages of seed development. DETs with the highest fold-changes in embryos and megagametophytes at different developmental stages are included. Transcript name (Transcript ID), fold-change (log2 E/M), expression values (RPKM Embryos and RPKM Megagametophytes) and the best match against TAIR database (At locus ID, At name, At annotation) are shown. (XLSX 6.02 kb)
DOI: 10.6084/m9.figshare.c.3619529_d1
title: Additional file 1: Table S1. of Identification and validation of multiple cell surface markers of clinical-grade adipose-derived mesenchymal stromal cells as novel release criteria for good manufacturing practice-compliant production

description: Oligonucleotide primer sequences used in qPCR reactions for the detection of CD marker gene transcript abundance. (XLSX 17.6 kb)
DOI: 10.17863/cam.101562
title: Supporting data for "Integrated reconstructive spectrometer with programmable photonic circuits"

description: This dataset (one excel file with multiple sheets) contains all the necessary data used to produce the Figure 4 in our manuscript (the reconstruction of single, dual, and triple-peak laser signals, broadband signal and the mixed singal). See the main manuscript for more details.
DOI: 10.15468/dl.frcuer
title: Occurrence Download

description: A dataset containing 9255 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fumaria parviflora Lam."
 ]
}

 The dataset includes 9255 records from 209 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033193-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3619532_d3
title: Additional file 3 of Evolution of transcriptional networks in yeast: alternative teams of transcriptional factors for different species

description: Supplementary material: database of the computed transcription factor binding probabilities. We report the database of the computed binding probabilities of 126 transcription factors to 2557 genes shared by 23 species. (TXT 415 kb)