cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/5b8p8hzx56.1
title: Gut microbiota and FHA - supplemental tables

description: The aim of our study was to assess the gut microbiota composition in patients with FHA, compare it with that of a healthy population, and evaluate the effects of hormonal replacement therapy (HRT) on it. No statistical difference was found comparing the gut microbiota alpha diversity of FHA patients at baseline and post treatment. Also the overall gut microbial composition after HRT was similar to baseline. On the contrary, the relative abundance analysis revealed specific changes after HRT. At the phylum level, Fusobacteria were significantly increased after HRT, as well as Ruminococcus and Eubacterium genera.
To identify the main factors having an impact on the gut microbiota components that showed a significant variation after HRT, we conducted a multiple linear regression where the main hormonal parameters, inflammatory variables and endometrial thickness were included. Fusobacteria, which were increased after HRT in FHA, were correlated with the reduction in some proinflammatory cytokines (i.e., IL1ra, IL4, GCSF, and CCL2; Supplemental Table S1). The increase in [Ruminococcus] gnavus group post-therapy was associated with changes in endometrial thickness, and several hormonal and cytokine mediators (Supplemental Table S2). Finally, some hormonal variables and endometrial thickness, rather than inflammatory parameters, were the most relevant associated factors with the variations of [Eubacterium] hallii group (Supplemental Table S3).
DOI: 10.5281/zenodo.4314912
title: Adsorption free energies and potentials of mean-force for interactions between amino acids, lipid fragments, and nanoparticles

description: This dataset contains tabulated potentials of mean force (PMFs) and associated adsorption (binding) free energies for interactions of amino acids side chain analogues and lipid fragments (LF) with a range of materials: titanium dioxide, iron oxide, amorphous silica, quartz, and a range of carbon-based materials including amorphous carbon, graphene and carbon nanotubes both in a pristine form and functionalized by a number of chemical groups. All data were computed from atomistic molecular dynamics simulations as a part of the SmartNanoTox project. The data are intended to be used in coarse-grained models describing interactions of nanomaterials with nanoparticles and for the prediction of the binding affinity of proteins and lipids to nanoparticles.
DOI: 10.5281/zenodo.4314911
title: Adsorption free energies and potentials of mean-force for interactions between amino acids, lipid fragments, and nanoparticles

description: This dataset contains tabulated potentials of mean force (PMFs) and associated adsorption (binding) free energies for interactions of amino acids side chain analogues and lipid fragments (LF) with a range of materials: titanium dioxide, iron oxide, amorphous silica, quartz, and a range of carbon-based materials including amorphous carbon, graphene and carbon nanotubes both in a pristine form and functionalized by certain chemical groups. All data were computed from atomistic molecular dynamics simulations as a part of the SmartNanoTox project 2016-2020. Version 2 of the dataset includes additional materials: zink oxide, zink sulfate in pristine and PMMA-coated forms computed within NanoSolveIt project (2019-2023). The data are intended to be used in coarse-grained models describing interactions of nanomaterials with nanoparticles, for the prediction of the binding affinity of proteins and lipids to nanoparticles, and as biological "fingerprints" of nanomaterials characterizing behavior of the nanomaterials in biological environments.
description: {"references": ["M. Saeedimasine, E. G. Brandt and A.P.Lyubartsev Atomistic Perspective on Biomolecular Adsorption on Functionalized Carbon Nanomaterials under Ambient Conditions J. Phys. Chem. B, 125(1), 416 - 430 (2021) DOI: 10.1021/acs.jpcb.0c08622", "I. Rouse, D. Power, E.G.Brandt, M. Schneemilch, K. Kotsis, N.Quirke, A.P.Lyubartsev, V. Lobaskin First principles characterisation of bio-nano interface Phys. Chem. Chem. Phys., 23(24), 13473-13482 (2021) DOI: 10.1039/d1cp01116b", "M. Saeedimasine, F. Grore, A. P. Lyubartsev Ab Initio Derived Classical Force Field for Molecular Dynamics Simulations of ZnO Surfaces in Biological Environment J. Phys. Chem. A, 127(25), 5446-5457 (2023) DOI: 10.1021/acs.jpca.3c00424", "R. Rahmani , A.P.Lyubartsev \"Biomolecular Adsorprion at ZnS Nanomaterials: A Molecular Dynamics Simulation Study of the Adsorption Preferences, Effects of the Surface Curvature and Coating\" Nanomateroals, 13(15), 2239 (2023) DOI: 10.3390/nano13152239"]}
DOI: 10.5281/zenodo.8297848
title: Adsorption free energies and potentials of mean-force for interactions between amino acids, lipid fragments, and nanoparticles

description: This dataset contains tabulated potentials of mean force (PMFs) and associated adsorption (binding) free energies for interactions of amino acids side chain analogues and lipid fragments (LF) with a range of materials: titanium dioxide, iron oxide, amorphous silica, quartz, and a range of carbon-based materials including amorphous carbon, graphene and carbon nanotubes both in a pristine form and functionalized by certain chemical groups. All data were computed from atomistic molecular dynamics simulations as a part of the SmartNanoTox project 2016-2020. Version 2 of the dataset includes additional materials: zink oxide, zink sulfate in pristine and PMMA-coated forms computed within NanoSolveIt project (2019-2023). The data are intended to be used in coarse-grained models describing interactions of nanomaterials with nanoparticles, for the prediction of the binding affinity of proteins and lipids to nanoparticles, and as biological "fingerprints" of nanomaterials characterizing behavior of the nanomaterials in biological environments.
description: {"references": ["M. Saeedimasine, E. G. Brandt and A.P.Lyubartsev Atomistic Perspective on Biomolecular Adsorption on Functionalized Carbon Nanomaterials under Ambient Conditions J. Phys. Chem. B, 125(1), 416 - 430 (2021) DOI: 10.1021/acs.jpcb.0c08622", "I. Rouse, D. Power, E.G.Brandt, M. Schneemilch, K. Kotsis, N.Quirke, A.P.Lyubartsev, V. Lobaskin First principles characterisation of bio-nano interface Phys. Chem. Chem. Phys., 23(24), 13473-13482 (2021) DOI: 10.1039/d1cp01116b", "M. Saeedimasine, F. Grore, A. P. Lyubartsev Ab Initio Derived Classical Force Field for Molecular Dynamics Simulations of ZnO Surfaces in Biological Environment J. Phys. Chem. A, 127(25), 5446-5457 (2023) DOI: 10.1021/acs.jpca.3c00424", "R. Rahmani , A.P.Lyubartsev \"Biomolecular Adsorprion at ZnS Nanomaterials: A Molecular Dynamics Simulation Study of the Adsorption Preferences, Effects of the Surface Curvature and Coating\" Nanomateroals, 13(15), 2239 (2023) DOI: 10.3390/nano13152239"]}
DOI: 10.6084/m9.figshare.24050379
title: fast_ranking_evaluation.zip

description: Datasets of FastEval
DOI: 10.6084/m9.figshare.24050379.v1
title: fast_ranking_evaluation.zip

description: Datasets of FastEval
DOI: 10.17638/datacat.liverpool.ac.uk/2427
title: Conserved mammalian muscle mechanics during eccentric contraction - data set

description: Isometric, force-length, concentric force-velocity, eccentric force velocity data across the mouse soleus and extensor digitorum longus, rat diaphragm and rabbit digastric muscle.
DOI: 10.5281/zenodo.4790347
title: CoMix social contact data (Netherlands)

description: Social contact data for Netherlands from the CoMix survey.
DOI: 10.5281/zenodo.4790345
title: CoMix social contact data (Netherlands)

description: Social contact data for Netherlands from the CoMix survey.<br> Changelog:<br> <br> Version 2: Updated time frame.<br>
description: {"references": ["Dynamics of non-household contacts during the COVID-19 pandemic in 2020 and 2021 in the Netherlands https://doi.org/10.1101/2022.10.19.22281248"]}
DOI: 10.5281/zenodo.7276465
title: CoMix social contact data (Netherlands)

description: Social contact data for Netherlands from the CoMix survey.<br> Changelog:<br> <br> Version 2: Updated time frame.<br>
description: {"references": ["Dynamics of non-household contacts during the COVID-19 pandemic in 2020 and 2021 in the Netherlands https://doi.org/10.1101/2022.10.19.22281248"]}
DOI: 10.34849/2k7noz/hmap9t
title: segnet_models_uavid.tar.xz

description: :unav
DOI: 10.34849/2k7noz
title: Segnet Models for Semantic Segmentation (UAVID, 480x360)

description: This archive contains the binaries (bin files) for Segnet models (Segnet 1, 2, 3, 4, 6, 8 and 9). It is composed per multiple bin files (one for each layer in the architecture). The segnet architectures have been trained for the uavid dataset with a resolution of 480x360
DOI: 10.5281/zenodo.8297870
title: Data for: ' Idiosyncratic trends of woodland invertebrate biodiversity in Britain over 45 years'

description: Data for our paper found at doi: 10.1111/icad.12685 The zip folder contains R scripts and code to analyse the relationship between species 'woodland association estimates and their long-term distribution trends. Note: the raw occurrence data could not be shared due to existing data sharing agreement. Instead, we share the derived data on species' woodland association estimates.
DOI: 10.5281/zenodo.8297967
title: Data for: ' Idiosyncratic trends of woodland invertebrate biodiversity in Britain over 45 years'

description: Data for our paper found at doi: 10.1111/icad.12685 The zip folder contains R scripts and code to analyse the relationship between species 'woodland association estimates and their long-term distribution trends. Note: the raw occurrence data could not be shared due to existing data sharing agreement. Instead, we share the derived data on species' woodland association estimates.
DOI: 10.5281/zenodo.8297869
title: Data for: ' Idiosyncratic trends of woodland invertebrate biodiversity in Britain over 45 years'

description: Data for our paper found at doi: 10.1111/icad.12685 The zip folder contains R scripts and code to analyse the relationship between species 'woodland association estimates and their long-term distribution trends. Note: the raw occurrence data could not be shared due to existing data sharing agreement. Instead, we share the derived data on species' woodland association estimates.
DOI: 10.5281/zenodo.8298056
title: Data for: ' Idiosyncratic trends of woodland invertebrate biodiversity in Britain over 45 years'

description: Data for our paper found at doi: 10.1111/icad.12685 The zip folder contains R scripts and code to analyse the relationship between species 'woodland association estimates and their long-term distribution trends. Note: the raw occurrence data could not be shared due to existing data sharing agreement. Instead, we share the derived data on species' woodland association estimates.
DOI: 10.5281/zenodo.8298060
title: Formulário de extração de dados - Análise dos Cursos de Computação no Brasil: Ensino de Programação sob a perspectiva das Necessidades do Século XXI

description: O "Formulário de Extração de Dados - Análise dos Cursos de Computação no Brasil: Ensino de Programação sob a Perspectiva das Necessidades do Século XXI" foi elaborado com o objetivo de coletar informações abrangentes e relevantes sobre os cursos de Computação oferecidos no Brasil, com um foco específico no ensino de programação e sua adequação às demandas do século XXI. Este formulário tem como propósito analisar como os currículos dos cursos de Computação estão alinhados com as necessidades atuais da indústria e do mercado de trabalho, considerando as habilidades e competências exigidas para enfrentar os desafios tecnológicos contemporâneos. Através das respostas coletadas neste formulário, busca-se compreender como os cursos estão integrando os conceitos e as práticas da programação moderna, bem como identificar possíveis lacunas no ensino que podem ser endereçadas para melhor preparar os estudantes para as demandas emergentes na área de Tecnologia da Informação. Suas respostas serão de grande valia para a pesquisa em andamento, contribuindo para uma visão mais clara sobre o cenário educacional na Computação e suas relações com as necessidades do século XXI.
DOI: 10.5281/zenodo.8298059
title: Formulário de extração de dados - Análise dos Cursos de Computação no Brasil: Ensino de Programação sob a perspectiva das Necessidades do Século XXI

description: O "Formulário de Extração de Dados - Análise dos Cursos de Computação no Brasil: Ensino de Programação sob a Perspectiva das Necessidades do Século XXI" foi elaborado com o objetivo de coletar informações abrangentes e relevantes sobre os cursos de Computação oferecidos no Brasil, com um foco específico no ensino de programação e sua adequação às demandas do século XXI. Este formulário tem como propósito analisar como os currículos dos cursos de Computação estão alinhados com as necessidades atuais da indústria e do mercado de trabalho, considerando as habilidades e competências exigidas para enfrentar os desafios tecnológicos contemporâneos. Através das respostas coletadas neste formulário, busca-se compreender como os cursos estão integrando os conceitos e as práticas da programação moderna, bem como identificar possíveis lacunas no ensino que podem ser endereçadas para melhor preparar os estudantes para as demandas emergentes na área de Tecnologia da Informação. Suas respostas serão de grande valia para a pesquisa em andamento, contribuindo para uma visão mais clara sobre o cenário educacional na Computação e suas relações com as necessidades do século XXI.
DOI: 10.5517/ccdc.csd.cc2d8zh5
title: CCDC 2213167: Experimental Crystal Structure Determination

description: Related Article: Yeye She, Yanhua Lu, Chaohong Jia, Yahong Li, Yi-Quan Zhang, Jin-lei Yao|2023|New J.Chem.|47|15650|doi:10.1039/D3NJ02225K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d8zj6
title: CCDC 2213168: Experimental Crystal Structure Determination

description: Related Article: Yeye She, Yanhua Lu, Chaohong Jia, Yahong Li, Yi-Quan Zhang, Jin-lei Yao|2023|New J.Chem.|47|15650|doi:10.1039/D3NJ02225K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.4304299
title: The role of semantics in the perceptual organization of shape

description: Dataset relative to the following publication: Schmidt, F., Kleis, J., Morgenstern, Y., & Fleming, R. W. (2020). The role of semantics in the perceptual organization of shape. <em>Scientific Reports, 10</em>, 22141. https://doi.org/10.1038/s41598-020-79072-w Each experiment folder contains the data relative to one experiment and a Matlab script for plotting the data, together with a text file with comments. The stimuli folder contains image files of all experimental stimuli and corresponding copyright information.
description: This work was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)—project number 222641018—SFB/TRR 135 TP C1 and by the European Research Council (ERC) Consolidator Award 'SHAPE'—project number ERC-CoG-2015-682859.
DOI: 10.5281/zenodo.4304298
title: The role of semantics in the perceptual organization of shape

description: Dataset relative to the following publication: Schmidt, F., Kleis, J., Morgenstern, Y., & Fleming, R. W. (2020). The role of semantics in the perceptual organization of shape. <em>Scientific Reports, 10</em>, 22141. https://doi.org/10.1038/s41598-020-79072-w Each experiment folder contains the data relative to one experiment and a Matlab script for plotting the data, together with a text file with comments. The stimuli folder contains image files of all experimental stimuli and corresponding copyright information.
description: This work was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)—project number 222641018—SFB/TRR 135 TP C1 and by the European Research Council (ERC) Consolidator Award 'SHAPE'—project number ERC-CoG-2015-682859.
DOI: 10.5281/zenodo.8296696
title: Optimized structures of the stationary points on the potential energy surface of the O(3P, 1D) + HCCCN(X1Σ+) reaction

description: This Zip file contains the cartesian coordinates of optimized stationary points of the O(<sup>3</sup>P, <sup>1</sup>D) + HCCCN(X<sup>1</sup>Σ<sup>+</sup>) potential energy surface published in our article “Reactions O(<sup>3</sup>P, <sup>1</sup>D) + HCCCN(X<sup>1</sup>Σ<sup>+</sup>) (Cyanoacetylene): Crossed-Beam and Theoretical Studies and Implications for the Chemistry of Extraterrestrial Environments” (<em>J. Phys. Chem. A</em> 2023, 127, 3, 685–703), that can be found in https://doi.org/10.1021/acs.jpca.2c07708. All calculations have been performed with Gaussian 09, Revision D.01. All structures have been optimized at B3LYP/aug-cc-pVTZ level of theory.
DOI: 10.5281/zenodo.8296695
title: Optimized structures of the stationary points on the potential energy surface of the O(3P, 1D) + HCCCN(X1Σ+) reaction

description: This Zip file contains the cartesian coordinates of optimized stationary points of the O(<sup>3</sup>P, <sup>1</sup>D) + HCCCN(X<sup>1</sup>Σ<sup>+</sup>) potential energy surface published in our article “Reactions O(<sup>3</sup>P, <sup>1</sup>D) + HCCCN(X<sup>1</sup>Σ<sup>+</sup>) (Cyanoacetylene): Crossed-Beam and Theoretical Studies and Implications for the Chemistry of Extraterrestrial Environments” (<em>J. Phys. Chem. A</em> 2023, 127, 3, 685–703), that can be found in https://doi.org/10.1021/acs.jpca.2c07708. All calculations have been performed with Gaussian 09, Revision D.01. All structures have been optimized at B3LYP/aug-cc-pVTZ level of theory.
DOI: 10.6084/m9.figshare.24050466
title: Raw Data. Rattus Norvegicus

description: Data base.
DOI: 10.6084/m9.figshare.24050466.v1
title: Raw Data. Rattus Norvegicus

description: Data base.
DOI: 10.26106/3gj4-ts06
title: Farmers 2017

description: Plik zaw. surowe dane (wyniki badań), wykorzystane w monografii "Think locally, act globally : Polish farmers in the global era of sustainability and resilience", ISBN 978-83-233-4949-5, s. 709
DOI: 10.34770/vesb-kq11
title: Dataset for the letter "Shifting and Splitting of Resonance Lines due to Dynamical Friction in Plasmas" Phys. Rev. Lett. 130, 105101 (2023)

description: Dataset for the letter "Shifting and Splitting of Resonance Lines due to Dynamical Friction in Plasmas" Phys. Rev. Lett. 130, 105101 (2023)
DOI: 10.17632/wkypp73j7z.1
title: Impact of Exchange Rate Volatility on Coffee Export in Kenya

description: The data for this study was obtained from various sources. The firm-level panel data for coffee from 2001 to 2020 was obtained from the Coffee Board of Kenya, International Coffee Organization, and Penn World Table. The annual firm-level data obtained was from 8 main coffee exporters who control about 80% of the market share. These exporters are Rashid Moledina & Co. Ltd., Kenya Co-operative Coffee Exporters Limited, Dormans, Mwangi Coffee Exporters, Sannex Coffee, Africoff Trading Co. Ltd, Rockbern Coffee Group and Diamond Coffee Company Ltd. The data on the four main trade destinations (foreign importing countries) – for the period under study – was also obtained from Coffee Board of Kenya. These four countries (Germany, Belgium, the United States and South Korea) import about 61% of the total Kenyan coffee are Germany, Belgium, the United States, and South Korea. Finally, the data on the RER was obtained from Central Bank of Kenya.
DOI: 10.17632/mm65dh657w.1
title: Data on the factors drive the decision of rural people to move into the city

description: This data shows the different socioeconomic  characteristics of the farm households that drive their one or more family members  to move into the city. Data were gathered by field survey using survey questionnaire.  This data is used to analyze the different factors which influence the farm household member to move into the city. SPSS 20 and STATA  11 software were used for analyzing the data
DOI: 10.17632/swcykgtkfv.1
title: Soil and landscape attributes of Amazonian Dark Earths

description: Amazonian Dark Earths are soil patches that occur in the Amazon region, characterized by high sequestered carbon content and high fertility compared to adjacent soils. These lands have been considered a model for sustainable agricultural use. As there is still no consensus about the origin and formation process of these soils, the preservation of the Amazonian Dark Earth sites is of fundamental importance. Thus,
DOI: 10.17632/swcykgtkfv.2
title: Soil and landscape attributes of Amazonian Dark Earths

description: Amazonian Dark Earths are soil patches that occur in the Amazon region, characterized by high sequestered carbon content and high fertility compared to adjacent soils. These lands have been considered a model for sustainable agricultural use. As there is still no consensus about the origin and formation process of these soils, the preservation of the Amazonian Dark Earth sites is of fundamental importance. Thus,
DOI: 10.17632/jw7kjghtnh.1
title: Professional Learning Communities and Teacher Job Satisfaction: Mediation-Moderation Effect of Trust in Colleagues and Emotional Intelligence in the Malaysian Context

description: Though many scholars have examined the effects of professional learning communities on teachers and students globally, research in Malaysian context is limited. This study aimed to provide the empirical evidence for the complex relationship between professional learning communities, teachers' job satisfaction, trust in colleagues and emotional intelligence among primary school teachers in Malaysia. Data was collected form 307 teachers, and structural equation modeling was used to analyse the relationship. Findings supported the direct and significant effect of professional learning communities on teachers' job satisfaction, significant mediating effect of teachers' trust in their colleagues, and a negative moderating effect emotional intelligence.
DOI: 10.17632/j26vc4c25s.1
title: Appendix 1. New media literacy scale (Koc & Barut, 2016)

description: This is the original scale of new media literacy (Koc & Barut, 2016), which is used in a research "The Important Role of New Media Literacy (NML) in Vietnam: Adaptation and Validation of the NML Scale"
DOI: 10.5281/zenodo.8298163
title: An environmental evaluation of potentially optimal regions for solar plant construction in China

description: Data for "<strong>An environmental evaluation of potentially optimal regions for solar plant construction in China</strong>"
DOI: 10.5281/zenodo.8298162
title: An environmental evaluation of potentially optimal regions for solar plant construction in China

description: Data for "<strong>An environmental evaluation of potentially optimal regions for solar plant construction in China</strong>"
DOI: 10.17632/ppgn4sx9dt.1
title: Disease Severity and Vaccination Propensity: A COVID-19 Case Study From Vietnam

description: Disease Severity and Vaccination Propensity: A COVID-19 Case Study From Vietnam