cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20055227.v1
title: Land-use affecting organic carbon and its active components in soil aggregates in China

description: ABSTRACT Due to large-scale wetland reclamation, the typical wetland had been conversed to different wetland use types (upland field, paddy field, and artificial forest) in the Sanjiang Plain. However, there are scarce data regarding soil aggregates and active organic carbons during land-use transition. Here, soil aggregates and the changes in content and storage of active organic carbon [total organic carbon (TOC), dissolved organic carbon (DOC), microbial biomass carbon (MBC), and readily oxidized carbon (ROC)] were studied under three land-uses reclaiming wetlands as an upland field, paddy field, and artificial forest in Heilongjiang Province, China. The results showed that soil aggregate structure changed significantly under the three land-uses, of which the largest decrease of mean weight diameter (MWD) occurred in the upland field. Under the three land-use types, the content and storage of TOC and each active organic carbon in soil aggregates with different size fractions significantly decreased compared with that in the wetland. In addition, the proportion of the 1–2 mm soil aggregate was significantly lower than that of other particle sizes, which resulted in the lowest storage of TOC and active organic carbon at 1-2 mm and was found in the wetland, and different land-use types; small aggregates (&lt;0.25 mm) with a small proportion were ignored in calculating organic carbon content and storage. The TOC and active organic carbon content in various soil aggregates varied significantly in different land-use types; the paddy field was most similar to the wetland because of seasonal flooding factors. In soil aggregates with various size fractions, the paddy field presented small changes in the TOC, DOC, and MBC content, and the ROC content was significantly lower than that in the upland field and the artificial forest land-use types. The TOC, DOC, and MBC content in the upland field and the artificial forest were significantly reduced compared with that in the paddy field due to the decrease of water content in the soil. In the artificial forest, which had less human disturbance, organic carbon content was less affected than in long-term cultivated upland fields due to its abundant plant root systems and large input of organic matter. The upland field could seriously affect the structure of soil aggregates and organic carbon in the wetlands and had the most negative impact on the wetland ecosystem.
DOI: 10.6084/m9.figshare.16909471.v1
title: Additional file 1 of Genome-wide identification of the tobacco GDSL family and apical meristem-specific expression conferred by the GDSL promoter

description: Additional file 1: Table S1. Basic information of GDSL gene family in Nicotiana tabacum.
DOI: 10.6084/m9.figshare.16909474.v1
title: Additional file 2 of Genome-wide identification of the tobacco GDSL family and apical meristem-specific expression conferred by the GDSL promoter

description: Additional file 2: Table S2. Candidate genes and the transcriptome data.
DOI: 10.6084/m9.figshare.16909474
title: Additional file 2 of Genome-wide identification of the tobacco GDSL family and apical meristem-specific expression conferred by the GDSL promoter

description: Additional file 2: Table S2. Candidate genes and the transcriptome data.
DOI: 10.6084/m9.figshare.16909477.v1
title: Additional file 3 of Genome-wide identification of the tobacco GDSL family and apical meristem-specific expression conferred by the GDSL promoter

description: Additional file 3: Table S3. The sequences of the GDSL family members in tobacco.
DOI: 10.6084/m9.figshare.18482464
title: Additional file 12 of A nuclear function for an oncogenic microRNA as a modulator of snRNA and splicing

description: Additional file 12 Supplementary Data 2. Analysis of putative miR-10b binding sites in mRNA (5′ UTR, CDS, and 3′ UTR) and ncRNA targets identified by CLEAR-CLIP, using the indicated prediction algorithms. P- predicted; V-validated.
DOI: 10.6084/m9.figshare.18482464.v1
title: Additional file 12 of A nuclear function for an oncogenic microRNA as a modulator of snRNA and splicing

description: Additional file 12 Supplementary Data 2. Analysis of putative miR-10b binding sites in mRNA (5′ UTR, CDS, and 3′ UTR) and ncRNA targets identified by CLEAR-CLIP, using the indicated prediction algorithms. P- predicted; V-validated.
DOI: 10.24403/jp.1320999
title: Otto Schwarz (1900-1983) / Friedrich Karl Meyer
DOI: 10.6084/m9.figshare.6948977
title: Rare and phylogenetically distinct plant species exhibit less diverse root-associated pathogen communities

description: Raw ITS sequences for 529 root tip samples collected from 45 plant species in a subtropical forest dynamic plot, southern China
DOI: 10.6084/m9.figshare.24891573
title: Data from: Improving patient-centred counselling skills among lay healthcare workers in South Africa using the Thusa-Thuso motivational interviewing training and support program

description: We developed a motivational Interviewing (MI) counselling training and support program for lay counsellors in South Africa – branded "Thusa-Thuso - helping you help", commonly referred to as Thusa-Thuso. We conducted a pilot study in South Africa to assess the impact of the Thusa-Thuso program for lay counsellors. We aimed to determine its effect on MI technical skills and explore the feasibility of a training-of-trainers (TOT) scale-up strategy among non-governmental (NGO) partners in the HIV treatment program. Adult (≥ 18 years) lay counsellors from ten primary healthcare clinics in Johannesburg participated in the program, attending the ten-day baseline training and quarterly refresher sessions over 12 months. With lay counsellors' and patients' written informed consent, audio recordings of counselling sessions were collected and reviewed using the MI treatment integrity (MITI) coding system to evaluate technical (cultivating change talk and softening sustain talk) and relational (empathy and partnership) competency scores before and after training. Following 12 months of providing support to pilot training participating lay counsellors, we were requested to expand the training to NGO partner team trainers through a one-time five-day Training of Trainers (TOT) format. This involved 127 trainees from November 2020 to January 2021. We report on the TOT training experiences based on focus group discussions with 42 participants conducted six months after the TOT sessions.
DOI: 10.6084/m9.figshare.24891573.v1
title: Data from: Improving patient-centred counselling skills among lay healthcare workers in South Africa using the Thusa-Thuso motivational interviewing training and support program

description: We developed a motivational Interviewing (MI) counselling training and support program for lay counsellors in South Africa – branded "Thusa-Thuso - helping you help", commonly referred to as Thusa-Thuso. We conducted a pilot study in South Africa to assess the impact of the Thusa-Thuso program for lay counsellors. We aimed to determine its effect on MI technical skills and explore the feasibility of a training-of-trainers (TOT) scale-up strategy among non-governmental (NGO) partners in the HIV treatment program. Adult (≥ 18 years) lay counsellors from ten primary healthcare clinics in Johannesburg participated in the program, attending the ten-day baseline training and quarterly refresher sessions over 12 months. With lay counsellors' and patients' written informed consent, audio recordings of counselling sessions were collected and reviewed using the MI treatment integrity (MITI) coding system to evaluate technical (cultivating change talk and softening sustain talk) and relational (empathy and partnership) competency scores before and after training. Following 12 months of providing support to pilot training participating lay counsellors, we were requested to expand the training to NGO partner team trainers through a one-time five-day Training of Trainers (TOT) format. This involved 127 trainees from November 2020 to January 2021. We report on the TOT training experiences based on focus group discussions with 42 participants conducted six months after the TOT sessions.
DOI: 10.6084/m9.figshare.25036004
title: Total Normalized Values for Modeling (2018-2019)

description: Estimation of gas Flaring by artificial neural network.
DOI: 10.6084/m9.figshare.22153388
title: The correlation between nuts and algae-less diet and children’s blood pressure: from a cross-sectional study in Chongqing

description: Nuts and algae have been shown to improve BP levels, but their effectiveness is controversial. This study aims to illustrate the effect of dietary pattern with nuts and algae-less on BP levels in children and adolescents from a cross-sectional study. A total of 5645 children from the Chongqing Children’s Health Cohort, aged 9.34 ± 1.74 years with 52.05% males, were analyzed. Stratified analysis was conducted to explore the differences between the two dietary patterns in urban or rural areas, as well as the differences in different gender. Logistic regression was used to analyze the influence factors of increased BP. And a GLM was used to analyze the influence of the two dietary patterns on systolic blood pressure (SBP, mmHg), diastolic blood pressure (DBP, mmHg), and mean arterial pressure (MAP, mmHg). Children with nuts and algae-less dietary patterns had higher SBP (104.68 ± 10.31 vs 103.81 ± 9.74, P = .006), DBP (64.27 ± 7.53 vs 63.55 ± 7.52, P = .002), and MAP (77.74 ± 7.75 vs 76.97 ± 7.52, P = .001) compared with those children with a balanced diet. After adjusting for covariates, the nuts and algae-less diet was a risk factor for hypertension in children when compared with the balanced diet(OR(95%CI):1.455(1.097,1.930), P = .009). The nuts and algae-less diet has a significant influence on SBP (104.68 ± 10.31 mmHg vs.103.81 ± 9.74 mmHg, P = .006). Stratified analysis by sex showed that nuts and algae-less dietary patterns had a more significant impact on females than males. Nuts and algae-less dietary pattern correlated with increased BP levels in children, and a greater impact on SBP levels was found in females, suggesting that a balanced diet with appropriate nuts and algae should be proposed for children in China.
DOI: 10.6084/m9.figshare.22153388.v1
title: The correlation between nuts and algae-less diet and children’s blood pressure: from a cross-sectional study in Chongqing

description: Nuts and algae have been shown to improve BP levels, but their effectiveness is controversial. This study aims to illustrate the effect of dietary pattern with nuts and algae-less on BP levels in children and adolescents from a cross-sectional study. A total of 5645 children from the Chongqing Children’s Health Cohort, aged 9.34 ± 1.74 years with 52.05% males, were analyzed. Stratified analysis was conducted to explore the differences between the two dietary patterns in urban or rural areas, as well as the differences in different gender. Logistic regression was used to analyze the influence factors of increased BP. And a GLM was used to analyze the influence of the two dietary patterns on systolic blood pressure (SBP, mmHg), diastolic blood pressure (DBP, mmHg), and mean arterial pressure (MAP, mmHg). Children with nuts and algae-less dietary patterns had higher SBP (104.68 ± 10.31 vs 103.81 ± 9.74, P = .006), DBP (64.27 ± 7.53 vs 63.55 ± 7.52, P = .002), and MAP (77.74 ± 7.75 vs 76.97 ± 7.52, P = .001) compared with those children with a balanced diet. After adjusting for covariates, the nuts and algae-less diet was a risk factor for hypertension in children when compared with the balanced diet(OR(95%CI):1.455(1.097,1.930), P = .009). The nuts and algae-less diet has a significant influence on SBP (104.68 ± 10.31 mmHg vs.103.81 ± 9.74 mmHg, P = .006). Stratified analysis by sex showed that nuts and algae-less dietary patterns had a more significant impact on females than males. Nuts and algae-less dietary pattern correlated with increased BP levels in children, and a greater impact on SBP levels was found in females, suggesting that a balanced diet with appropriate nuts and algae should be proposed for children in China.
DOI: 10.6084/m9.figshare.10094783
title: MOESM3 of Hypermethylation of mismatch repair gene hMSH2 associates with platinum-resistant disease in epithelial ovarian cancer

description: Additional file 3: Table S2. Thestatistics analysis data of 276 genes with differential methylation regions between platinum-resistant EOC tissues and platinum-sensitive EOC tissues through RRBS assay.
DOI: 10.6084/m9.figshare.10094783.v1
title: MOESM3 of Hypermethylation of mismatch repair gene hMSH2 associates with platinum-resistant disease in epithelial ovarian cancer

description: Additional file 3: Table S2. Thestatistics analysis data of 276 genes with differential methylation regions between platinum-resistant EOC tissues and platinum-sensitive EOC tissues through RRBS assay.
DOI: 10.6084/m9.figshare.10094789
title: MOESM1 of Microevolution within ST11 group Clostridioides difficile isolates through mobile genetic elements based on complete genome sequencing

description: Additional file 1. Table summarizing transposals identified in the three C. difficile isolates.
DOI: 10.6084/m9.figshare.10094789.v1
title: MOESM1 of Microevolution within ST11 group Clostridioides difficile isolates through mobile genetic elements based on complete genome sequencing

description: Additional file 1. Table summarizing transposals identified in the three C. difficile isolates.
DOI: 10.6084/m9.figshare.16909534.v1
title: Additional file 2 of Whole transcriptome sequencing identifies key circRNAs, lncRNAs, and miRNAs regulating neurogenesis in developing mouse retina

description: Additional file 2: Supplementary Table 1. primer sequences of four circRNAs and lncRNAs in Quantitative Real-time PCR. Supplementary Table S2. RNA-RNA pairs in circRNA/lncRNA-miRNA-mRNA Network.
DOI: 10.6084/m9.figshare.18482461
title: Additional file 11 of A nuclear function for an oncogenic microRNA as a modulator of snRNA and splicing

description: Additional file 11 Supplementary Data 1. MiR-10b chimeras identified by CLEAR-CLIP. Related to STAR Methods. The table lists two most probable chimeric arms for each chimeric read along with their alignment and sequence information. Interacting chimeric regions were annotated with Transcript_ID, Gene_ID, Symbol, and RNA class. Exact genomic alignment positions are indicated for each chimeric arm. For identification of basepairing, IntaRNA software was used (Mann et al., 2017) and results are presented in the last two columns. More details are described in the Methods.
DOI: 10.6084/m9.figshare.18482467.v1
title: Additional file 13 of A nuclear function for an oncogenic microRNA as a modulator of snRNA and splicing

description: Additional file 13 Supplementary Data 3. Changes in alternative splicing caused by miR-10b inhibitor. GBM4 cells were transfected with miR-10b inhibitor and the corresponding control oligonucleotide for 72 h, and alternatively spliced mRNA isoforms profiled by deep RNAseq. Splicing alterations are summarized for five major categories (SE, MXE, A5SS, A3SS, RI). More details are described in the Methods.
DOI: 10.6084/m9.figshare.18482461.v1
title: Additional file 11 of A nuclear function for an oncogenic microRNA as a modulator of snRNA and splicing

description: Additional file 11 Supplementary Data 1. MiR-10b chimeras identified by CLEAR-CLIP. Related to STAR Methods. The table lists two most probable chimeric arms for each chimeric read along with their alignment and sequence information. Interacting chimeric regions were annotated with Transcript_ID, Gene_ID, Symbol, and RNA class. Exact genomic alignment positions are indicated for each chimeric arm. For identification of basepairing, IntaRNA software was used (Mann et al., 2017) and results are presented in the last two columns. More details are described in the Methods.
DOI: 10.6084/m9.figshare.18482467
title: Additional file 13 of A nuclear function for an oncogenic microRNA as a modulator of snRNA and splicing

description: Additional file 13 Supplementary Data 3. Changes in alternative splicing caused by miR-10b inhibitor. GBM4 cells were transfected with miR-10b inhibitor and the corresponding control oligonucleotide for 72 h, and alternatively spliced mRNA isoforms profiled by deep RNAseq. Splicing alterations are summarized for five major categories (SE, MXE, A5SS, A3SS, RI). More details are described in the Methods.
DOI: 10.6084/m9.figshare.22153964
title: lamb and ewe chip-data

description: Chip data of 95 sheep after filtering
DOI: 10.6084/m9.figshare.21629685
title: Genetic diversity of 15 STR loci in Yunnan Va ethnic minority and the phylogenetic relationships with 26 other populations

description: The Va (also called “Wa”) people are an ethnic minority living mainly in the southwest of Yunnan Province This study was conducted to obtain the genetic information and forensic statistical parameters of 15 autosomal short tandem repeat (STR) loci included in the AmpFlSTR<sup>®</sup>Identifiler™ kit (Applied Biosystems, Foster City, CA) in the Yunnan Va population, with a view to enriching the genetic databases of the Chinese Va population. A total of 508 unrelated Chinese Va individuals were genotyped with this 15 STR kit, the genetic polymorphisms and associated forensic parameters were calculated. The genetic relationships between Chinese Va and 26 other Chinese populations were also evaluated. All of the STR loci reached the Hardy–Weinberg equilibrium after Bonferroni correction. A total of 159 alleles were observed with allele frequencies ranging from 0.000984 to 0.606299. The combined discrimination power (CDP) and the cumulative probability of excluding (CPE) of the 15 STR loci were 0.999 999 999 999 999 988 126 and 0.999 995 734, respectively. Our results indicated that the geographically adjacent or ethnically close populations showed a higher genetic affinity. The results of this study will enrich the forensic databases of the Chinese Va population and could be applied in forensic analysis.
DOI: 10.6084/m9.figshare.21629685.v1
title: Genetic diversity of 15 STR loci in Yunnan Va ethnic minority and the phylogenetic relationships with 26 other populations

description: The Va (also called “Wa”) people are an ethnic minority living mainly in the southwest of Yunnan Province This study was conducted to obtain the genetic information and forensic statistical parameters of 15 autosomal short tandem repeat (STR) loci included in the AmpFlSTR<sup>®</sup>Identifiler™ kit (Applied Biosystems, Foster City, CA) in the Yunnan Va population, with a view to enriching the genetic databases of the Chinese Va population. A total of 508 unrelated Chinese Va individuals were genotyped with this 15 STR kit, the genetic polymorphisms and associated forensic parameters were calculated. The genetic relationships between Chinese Va and 26 other Chinese populations were also evaluated. All of the STR loci reached the Hardy–Weinberg equilibrium after Bonferroni correction. A total of 159 alleles were observed with allele frequencies ranging from 0.000984 to 0.606299. The combined discrimination power (CDP) and the cumulative probability of excluding (CPE) of the 15 STR loci were 0.999 999 999 999 999 988 126 and 0.999 995 734, respectively. Our results indicated that the geographically adjacent or ethnically close populations showed a higher genetic affinity. The results of this study will enrich the forensic databases of the Chinese Va population and could be applied in forensic analysis.
DOI: 10.6084/m9.figshare.22154097
title: Machine learning approach for analysing and predicting the modulus response of the structural epoxy adhesive at elevated temperatures

description: For bonded Fibre Reinforced Polymer (FRP) strengthening systems in civil engineering projects, the adhesive joint performance is a key factor in the effectiveness of the strengthening; however, it is known that the material properties of structural epoxy adhesives change with temperature. This present paper examines the implied relationship between the curing regimes and the storage modulus response of the adhesive using a Machine Learning (ML) approach. A dataset containing 157 experimental data collected from the scientific papers and academic theses was used for training and testing an Artificial Neural Network (ANN) model. The sensitivity analysis reveals that the curing conditions have a significant effect on the glass transition temperatures (<i>T<sub>g</sub></i>) of the adhesive, and consequently on the storage modulus response at elevated temperatures. Curing at an extremely high temperature for a long time does not, however, guarantee a better thermal performance. For the studied adhesive, curing in a warm (≥ 45°C) and dry (near 0 % RH) environment for 21 days is recommended for practical applications. A software with a Graphical User Interface (GUI) was established, which can predict the storage modulus response of the adhesive, plot the corresponding response curve, and estimate the optimum curing condition.
DOI: 10.6084/m9.figshare.22154097.v1
title: Machine learning approach for analysing and predicting the modulus response of the structural epoxy adhesive at elevated temperatures

description: For bonded Fibre Reinforced Polymer (FRP) strengthening systems in civil engineering projects, the adhesive joint performance is a key factor in the effectiveness of the strengthening; however, it is known that the material properties of structural epoxy adhesives change with temperature. This present paper examines the implied relationship between the curing regimes and the storage modulus response of the adhesive using a Machine Learning (ML) approach. A dataset containing 157 experimental data collected from the scientific papers and academic theses was used for training and testing an Artificial Neural Network (ANN) model. The sensitivity analysis reveals that the curing conditions have a significant effect on the glass transition temperatures (<i>T<sub>g</sub></i>) of the adhesive, and consequently on the storage modulus response at elevated temperatures. Curing at an extremely high temperature for a long time does not, however, guarantee a better thermal performance. For the studied adhesive, curing in a warm (≥ 45°C) and dry (near 0 % RH) environment for 21 days is recommended for practical applications. A software with a Graphical User Interface (GUI) was established, which can predict the storage modulus response of the adhesive, plot the corresponding response curve, and estimate the optimum curing condition.