cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.f8wfzb
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Syzygium formosum"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008368-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13145919
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.k46skc
title: Occurrence Download

description: A dataset containing 16 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.countrycode IN ('CN', 'HK', 'MO')
 AND occurrence.hascoordinate = TRUE
 AND occurrence.hasgeospatialissues = FALSE
 AND (CAST(occurrence.taxonkey AS INTEGER) = 4372686 OR CAST(occurrence.acceptedtaxonkey AS INTEGER) = 4372686 OR CAST(occurrence.kingdomkey AS INTEGER) = 4372686 OR CAST(occurrence.phylumkey AS INTEGER) = 4372686 OR CAST(occurrence.classkey AS INTEGER) = 4372686 OR CAST(occurrence.orderkey AS INTEGER) = 4372686 OR CAST(occurrence.familykey AS INTEGER) = 4372686 OR CAST(occurrence.genuskey AS INTEGER) = 4372686 OR CAST(occurrence.specieskey AS INTEGER) = 4372686)
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 16 records were derived from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008342-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28789001
title: Replication Package For The Project "Quantifying Security Training in Organizations Through the Analysis of U.S. SEC 10-K Filings"

description: <pre>The Security Awareness and Training (SAT) market exceeds a billion dollars annually, yet reliable data on organizational adoption remains scarce. Conflicting, survey-based figures from cybersecurity vendors leave researchers and decision-makers reliant on questionable insights. A new U.S. Securities and Exchange Commission (SEC) regulation, effective since late 2023, now requires companies to disclose cybersecurity strategies in annual Form 10-K filings—offering a more consistent data source. In this study, we analyze filings from U.S. companies across diverse sectors andsizes, using keyword searches and thematic analysis. Our findings help organizations critically assess SAT strategies and vendor claims, offer actionable insights for policymakers, and equip scholars with a coded dataset and crawling tools for ongoing longitudinal analysis.<br><br>Here we provide the <b>replication package</b>.The README details all files and their content.</pre>
DOI: 10.6084/m9.figshare.28789001.v2
title: Replication Package For The Project "Quantifying Security Training in Organizations Through the Analysis of U.S. SEC 10-K Filings"

description: <pre>The Security Awareness and Training (SAT) market exceeds a billion dollars annually, yet reliable data on organizational adoption remains scarce. Conflicting, survey-based figures from cybersecurity vendors leave researchers and decision-makers reliant on questionable insights. A new U.S. Securities and Exchange Commission (SEC) regulation, effective since late 2023, now requires companies to disclose cybersecurity strategies in annual Form 10-K filings—offering a more consistent data source. In this study, we analyze filings from U.S. companies across diverse sectors andsizes, using keyword searches and thematic analysis. Our findings help organizations critically assess SAT strategies and vendor claims, offer actionable insights for policymakers, and equip scholars with a coded dataset and crawling tools for ongoing longitudinal analysis.<br><br>Here we provide the <b>replication package</b>.The README details all files and their content.</pre>
DOI: 10.6084/m9.figshare.28789001.v1
title: Replication Package For The Project "Moving Beyond Vendor Claims: Quantifying Security Training in Organizations Through the Analysis of U.S. SEC 10-K Filings"

description: <pre>The Security Awareness and Training (SAT) market exceeds a billion dollars annually, yet reliable data on organizational adoption remains scarce. Conflicting, survey-based figures from cybersecurity vendors leave researchers and decision-makers reliant on questionable insights. A new U.S. Securities and Exchange Commission (SEC) regulation, effective since late 2023, now requires companies to disclose cybersecurity strategies in annual Form 10-K filings—offering a more consistent data source. In this study, we analyze filings from U.S. companies across diverse sectors andsizes, using keyword searches and thematic analysis. Our findings help organizations critically assess SAT strategies and vendor claims, offer actionable insights for policymakers, and equip scholars with a coded dataset and crawling tools for ongoing longitudinal analysis.<br><br>Here we provide the <b>replication package</b>.The README details all files and their content.</pre>
DOI: 10.15468/dl.r2mshx
title: Occurrence Download

description: A dataset containing 4454 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Trisetum spicatum",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 4454 records from 167 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008369-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13145903
title: Daily Public Opinion on Israel-Palestine War
DOI: 10.15468/dl.mmfb5u
title: Occurrence Download

description: A dataset containing 20044 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Steatoda nobilis"
 ]
}

 The dataset includes 20044 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008371-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nfvncr
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio sarracenicus",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 103 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008372-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vgkfju
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio sarracenicus",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 32 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008373-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4rfucc
title: Occurrence Download

description: A dataset containing 14026 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bufo gargarizans"
 ]
}

 The dataset includes 14026 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008375-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30187030
title: Dataset for the study Dissecting Oxidative Stress and Organismic Response to a Temperature Gradient in the midge <i>Chironomus riparius</i>

description: Oxidative stress, caused by reactive oxygen species (ROS), poses a major challenge for organisms facing temperature fluctuations. This study provides the first direct <i>in vivo</i> measurements of ROS production together with transcriptome analysis of oxidative stress genes across a broad range of ecologically relevant temperatures in insect larvae of the dipteran midge <i>Chironomus riparius</i>. We observed a U-shaped pattern of oxidative stress, with minimal ROS levels within an optimal thermal window (12-18°C) and significantly elevated stress at both cold and warm extremes. Crucially, our findings reveal distinct underlying molecular mechanisms for ROS generation at these extremes: at low temperatures, predominantly ROS produced is of the superoxide group, linked to hypoxia-induced hemoglobin autoxidation. Conversely, at high temperatures, the hydrogen peroxide group dominates, associated with increased metabolic rate and heat stress signaling pathways. Transcriptomic analysis shows that <i>C. riparius</i>'s antioxidant defense system adapts accordingly, selectively upregulating mechanisms to counteract the specific dominant ROS type at different temperatures. This mechanistically differentiated oxidative stress at different temperatures and the modulated organismic response reflects the ecological niche and evolution of <i>C. riparius</i>.
DOI: 10.6084/m9.figshare.30187030.v1
title: Dataset for the study Dissecting Oxidative Stress and Organismic Response to a Temperature Gradient in the midge <i>Chironomus riparius</i>

description: Oxidative stress, caused by reactive oxygen species (ROS), poses a major challenge for organisms facing temperature fluctuations. This study provides the first direct <i>in vivo</i> measurements of ROS production together with transcriptome analysis of oxidative stress genes across a broad range of ecologically relevant temperatures in insect larvae of the dipteran midge <i>Chironomus riparius</i>. We observed a U-shaped pattern of oxidative stress, with minimal ROS levels within an optimal thermal window (12-18°C) and significantly elevated stress at both cold and warm extremes. Crucially, our findings reveal distinct underlying molecular mechanisms for ROS generation at these extremes: at low temperatures, predominantly ROS produced is of the superoxide group, linked to hypoxia-induced hemoglobin autoxidation. Conversely, at high temperatures, the hydrogen peroxide group dominates, associated with increased metabolic rate and heat stress signaling pathways. Transcriptomic analysis shows that <i>C. riparius</i>'s antioxidant defense system adapts accordingly, selectively upregulating mechanisms to counteract the specific dominant ROS type at different temperatures. This mechanistically differentiated oxidative stress at different temperatures and the modulated organismic response reflects the ecological niche and evolution of <i>C. riparius</i>.
DOI: 10.15468/dl.axg3ed
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio sarracenicus",
 "Country is Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008374-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17182917
title: Roads and rivers. The importance of regional transportation networks for early urbanization in central Italy (1000–500 BC)

description: This repository accompanies the article "Roads and rivers. The importance of regional transportation networks for early urbanization in central Italy (1000–500 BC)" (Prignano et al., in review, Journal of Archaeological Science).

It contains:- Ten GML graphs (roads and rivers by archaeological age, 1000–500 BC).- One CSV file with coastal nodes for robustness tests.- Python scripts for analysis and figure generation (core + appendix).- Seven interactive HTML maps for supplementary visualization.- README.md and requirements.txt for setup and usage.

All scripts use relative paths and reproduce the analyses as described in the manuscript. See the included README.md for software requirements and usage examples.

ContactFor issues regarding the article: Francesca Fulminante (corresponding author) — francesca.fulminante@bristol.ac.ukFor issues regarding data and code: Luce Prignano — luce@heuristica.barcelona, luceprignano@gmail.com
DOI: 10.15468/dl.j4hhxe
title: Occurrence Download

description: A dataset containing 214 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea psammogena"
 ]
}

 The dataset includes 214 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008376-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pevwqu
title: Occurrence Download

description: A dataset containing 512040 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Frangula alnus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 512040 records from 1887 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008328-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13885723
title: Surfactant derived protein type B: a new biomarker linked to respiratory failure and lung damage in mild to moderate SARS-CoV-2 pneumonia.

description: Background: The COVID-19 pandemic has led to significant concern due to its impact on human health, particularly through pneumonia-induced lung damage. Surfactant proteins A and D (SP-A and SP-D) are implicated in COVID-19 lung damage, but the role of surfactant protein B (SP-B) remains unclear.

Methods: We conducted a single-center prospective observational study involving 73 hospitalized COVID-19 pneumonia patients. SP-B levels were measured within 48 hours of admission, alongside SP-A and SP-D in a subset. Clinical data were collected, and follow-up visits were conducted after 6 months.

Results: At hospitalization, circulating immature SP-B levels measured in 73 patients (26.31 AU [14.27-41.31]), correlated significantly with lung involvement (r=0.447, p<0.001) and oxygen support requirement (p=0.005). SP-B levels did not predict mechanical ventilation or ICU admission. SP-B decreased significantly (p<0.001) from 25.53 AU [14.36-41.46] at the acute hospitalization to 12.73 AU [9.12-20.23] at 6 months follow up, unlike SP-A and SP-D that did not change significantly. Immature SP-B (but not SP-A and SP-D) confirmed to be significantly associated with the need of oxygen support (n=26, 58%) during the hospitalization (p<0.05).

Conclusion: Immature SP-B emerges as a potential biomarker for COVID-19 pneumonia severity and prognosis. Its dynamic changes suggest utility in monitoring disease progression and long-term outcomes, despite limitations in predicting hard endpoints. Larger studies are needed to validate these findings and understand the underlying mechanisms of surfactant protein dysregulation in COVID-19 pathogenesis.
DOI: 10.5281/zenodo.13885724
title: Surfactant derived protein type B: a new biomarker linked to respiratory failure and lung damage in mild to moderate SARS-CoV-2 pneumonia.

description: Background: The COVID-19 pandemic has led to significant concern due to its impact on human health, particularly through pneumonia-induced lung damage. Surfactant proteins A and D (SP-A and SP-D) are implicated in COVID-19 lung damage, but the role of surfactant protein B (SP-B) remains unclear.

Methods: We conducted a single-center prospective observational study involving 73 hospitalized COVID-19 pneumonia patients. SP-B levels were measured within 48 hours of admission, alongside SP-A and SP-D in a subset. Clinical data were collected, and follow-up visits were conducted after 6 months.

Results: At hospitalization, circulating immature SP-B levels measured in 73 patients (26.31 AU [14.27-41.31]), correlated significantly with lung involvement (r=0.447, p<0.001) and oxygen support requirement (p=0.005). SP-B levels did not predict mechanical ventilation or ICU admission. SP-B decreased significantly (p<0.001) from 25.53 AU [14.36-41.46] at the acute hospitalization to 12.73 AU [9.12-20.23] at 6 months follow up, unlike SP-A and SP-D that did not change significantly. Immature SP-B (but not SP-A and SP-D) confirmed to be significantly associated with the need of oxygen support (n=26, 58%) during the hospitalization (p<0.05).

Conclusion: Immature SP-B emerges as a potential biomarker for COVID-19 pneumonia severity and prognosis. Its dynamic changes suggest utility in monitoring disease progression and long-term outcomes, despite limitations in predicting hard endpoints. Larger studies are needed to validate these findings and understand the underlying mechanisms of surfactant protein dysregulation in COVID-19 pathogenesis.
DOI: 10.5285/29b2324d-1b8c-c7d6-e063-7086abc0cef2
title: Radiocarbon data of planktic foraminifera in sediment cores collected from the Semenov Hydrothermal Field region of the Mid-Atlantic Ridge during the RRS James Cook cruise JC224 (March - April 2022)

description: Sub-samples from sediment cores collected from the Semenov Hydrothermal Field region of the Mid-Atlantic Ridge during the RRS James Cook cruise JC224 (March - April 2022) were taken for geochronological analysis, specifically targeting planktic foraminifera, which were selected and prepared for radiocarbon dating. Sample preparation was conducted at the National Environmental Isotope Facility Radiocarbon Laboratory, Scottish Universities Environmental Research Centre, UK, and radiocarbon measurements were performed using Accelerator Mass Spectrometry at the Keck Carbon Cycle AMS Facility, University of California, Irvine, USA. This dataset includes radiocarbon isotope data of planktic foraminifera within the JC224 sediment cores which can be used to constrain the ages of the sediments and construct age-depth models. The data were collected as part of a PhD project funded under NERC's Ultramafic-hosted mineral Resource Assessment (ULTRA) project, grant reference NE/S004068/1, and the sediment cores are currently stored at the BOSCORF for long-term preservation.
DOI: 10.15468/dl.ymnp84
title: Occurrence Download

description: A dataset containing 356765 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Netta rufina (Pallas, 1773)"
 ]
}

 The dataset includes 356765 records from 978 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006151-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7wusp4
title: Occurrence Download

description: A dataset containing 151363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Lao People’s Democratic Republic",
 "DatasetKey is EOD – eBird Observation Dataset"
 ]
}

 The dataset includes 151363 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006146-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.fnz94abn
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (40 records)
DOI: 10.15468/dl.esk9g6
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex hastata Kük."
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006159-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pzhj8w
title: Occurrence Download

description: A dataset containing 1045 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cycas media R.Br."
 ]
}

 The dataset includes 1045 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006161-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tg2hud
title: Occurrence Download

description: A dataset containing 576 species occurrences available in GBIF matching the query:
{
 "and" : [
 "InstitutionKey is e71f36f1-e271-4720-a604-3c5a1418e7aa",
 {
 "and" : [
 "Geometry POLYGON((22.1459592783514 6.686713967612164,22.1459592783514 -5.150996227601254,45.17059937015631 -5.150996227601254,45.17059937015631 6.686713967612164,22.1459592783514 6.686713967612164))",
 "TaxonKey is one of (Artiodactyla, Perissodactyla)"
 ]
 }
 ]
}

 The dataset includes 576 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006162-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.