cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/fstsb2xfsf.1
title: PML-regulated mitochondrial metabolism enhances chemosensitivity in human ovarian cancers

description: High-grade serous ovarian cancer (HGSOC) remains an unmet medical challenge. Here, we unravel an unanticipated metabolic heterogeneity in HGSOC. By combining proteomic, metabolomic, and bioergenetic analyses, we identify two molecular subgroups, low- and high-OXPHOS. While low-OXPHOS exhibit a glycolytic metabolism, high-OXPHOS HGSOCs rely on oxidative phosphorylation, supported by glutamine and fatty acid oxidation, and show chronic oxidative stress. We identify an important role for the PML-PGC-1α axis in the metabolic features of high-OXPHOS HGSOC. In high-OXPHOS tumors, chronic oxidative stress promotes aggregation of PML-nuclear bodies, resulting in activation of the transcriptional co-activator PGC-1α. Active PGC-1α increases synthesis of electron transport chain complexes, thereby promoting mitochondrial respiration. Importantly, high-OXPHOS HGSOCs exhibit increased response to conventional chemotherapies, in which increased oxidative stress, PML, and potentially ferroptosis play key functions. Collectively, our data establish a stress-mediated PML-PGC-1α-dependent mechanism that promotes OXPHOS metabolism and chemosensitivity in ovarian cancer.
DOI: 10.17632/5c2z92vw3g.2
title: The Relative Contribution of High-Gamma Linguistic Processing Stages of Word Production, and Motor Imagery of Articulation in Class Separability of Covert Speech tasks in EEG data

description: Raw EEG recordings.
DOI: 10.17632/9gwyx4vxt8.1
title: Genome-wide identification of structure-forming repeats as principal sites of fork collapse upon ATR inhibition. Shastri, Tsai et al.

description: In this manuscript, we identify new classes of difficult-to-replicate sequences in the mouse and human genomes that are highly dependent on ATR function for stability during DNA replication. Structure-forming short tandem repeats, inverted retroelements, and quasi- palindromic AT-rich repeats characterize the sites for fork collapse caused by ATR inhibition. The data deposited here include original images for the 2D gels, PAGE gels, and Southern blots presented in the manuscript. These include non-denaturing PAGE gels of oligonucleotide repeats most commonly observed within RPA-enriched sites from ATR inhibition that demonstrate single-band formation and greater electrophoretic mobility than expected based on their length, suggesting formation of compact, uniquely folded structures (Figure 3A and G). Also included are 2D neutral-neutral gel electrophoresis images of synthesis occurring across inserted (CAGAGG)105 repeats or a scrambled sequence in an orientation that is either proximal to the bidirectional SV40 origin (ori-proximal), or distal (ori-distal) in a pML113 vector transfected into U2OS cells. Southern hybridization to the probe indicated in Figure 4D and E was performed. These gels show double-Y migration products only in (CAGAGG)105 repeat-containing vectors, not scrambled controls, indicating that fork stalling occurs at the (CAGAGG)105 repeat interface from both sides. This inhibition of fork movement was increased 5-fold upon aphidicolin treatment. These images refer to data presented in Figure 4 and Figure S5. To prove sufficiency of the (CAGAGG)n repeat in causing breaks, an HFUGW vector containing (CAGAGG)105 repeats or a scrambled sequence was transfected into 4-3 MEFs and assayed for breakage at insert-proximal vector sequences by BrITL qRT-PCR. The TAE agarose gel depicts PstI-digested HFUGW vector prior to transfection into cells, with insert sequences from (CAGAGG)105 or scrambled control indicated above each lane. A Southern blot depicts the (CAGAGG)105 and scrambled insert sequence detected after transfection of cells with the relevant insert-containing vector. These images refer to data presented in Figure 6 and Figure S6.
DOI: 10.17632/dg2y5pnk8c.1
title: Stability and variability of self-esteem: Experience sampling study

description: This data file is prepared to be readf by the Mplus syntax file SSE-ARIS-ST.inp.
DOI: 10.17632/dszzkdxk4j.1
title: Multimodal Transportation Analysis

description: The simulation analysis of multi modal transportation systems was performed in VISSIM microsimulation for three networks in Salt Lake City, UT. The excel files provide traffic simulation outputs and data analysis, including the performance measures. The results are given for intersection MOEs, travel times/speeds and transit productive capacities. The pdf files provide methods, inputs and results of the statistical tests performed on the simulation outputs.
DOI: 10.17632/ksks9dwpcp.1
title: Sediment dynamics in Patagonian Gulf

description: The dataset contains textural parameters and location of surface sediment samples from an Argentina Patagonia Gulf (San José Gulf), used to infer sediment transports and bottom dynamics. This is a semi-enclosed basin with two contrasting hydrodynamic domains subjected to strong wind conditions and where a thermal frontal system occur during the warm season.
DOI: 10.5281/zenodo.1460644
title: Sardinia_Rsds_Miroc-Esm-Chem_Rcp4P5_2006-2099_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5281/zenodo.1460645
title: Sardinia_Rsds_Miroc-Esm-Chem_Rcp4P5_2006-2099_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5517/ccdc.csd.cc1nvscn
title: CCDC 1545082: Experimental Crystal Structure Determination

description: Related Article: Kailu Zheng, Shiyi Zhuang, Wenming Shu, Yandong Wu, Chuluo Yang, Anxin Wu|2018|Chem.Commun.|54|11897|doi:10.1039/C8CC06908E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/h2zx28wxwk.1
title: Radio occultation profiles of Pluto's neutral atmosphere

description: The New Horizons spacecraft performed radio occultation sounding of Pluto's neutral atmosphere. The atmospheric profiles retrieved from the data at entry and exit are listed in these files. See Hinson et al. (Icarus 290, 96-111, 2017, http://dx.doi.org/10.1016/j.icarus.2017.02.031) for a description of the contents of the files and how they were obtained.
DOI: 10.17632/hjh532g9gs.1
title: Lateral Asymmetry in Weekly Reproducibility of Resting State Amygdala Functional Connectivity

description: seed-based analisys amygdala 2nd level (one- , two-t test); raw seed-based amygdala data, raw fmri data, ROI connectivity parameters, raw scores of questionnaires All participants underwent three scanning sessions: one session on the first day, a second session after 24 hours, and the third session seven days after the first one. In order to eliminate the possible influence of fear in the brain activity of participants who might have been experiencing MRI for the first time, or those who were afraid of or uncomfortable with the MRI procedure, we took data only from the second and third sessions ('days') for use in the test-retest reliability analysis and additional statistical comparison of the FC patterns between scanning sessions. For this reason, we refer hereinafter to the second scanning session (day) as the first analyzed session, and to the third session (day) as the second analyzed session.
DOI: 10.5281/zenodo.1460646
title: Sardinia_Rsds_Miroc-Esm-Chem_Rcp6P0_2006-2099_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5281/zenodo.1460647
title: Sardinia_Rsds_Miroc-Esm-Chem_Rcp6P0_2006-2099_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.17632/dt2x65b265.2
title: Paper CAM_Study of the tool path calculated by different commercial CAM software and its influences on the real machining time and surface roughness for milling free form geometries

description: Rough data of the work: Study of the tool path calculated by different commercial CAM software and its influences on the real machining time and surface roughness for milling free form geometries
DOI: 10.17632/r6g7dwchw3.1
title: Data for: Kinematic Calibration Method for a Two-Segment Hydraulic Leg Based on an Improved Whale Swarm Algorithm

description: The experimental data, including the comparison experiment over 30 runs and application experiment.
DOI: 10.17632/tf8dzkynsm.1
title: A study of The roles of introgression and climate change in the rise to dominance of Acropora corals. Mao et al
DOI: 10.17632/tg2622h9dd.1
title: Intramembrane ionic protein-lipid interaction regulates integrin structure and function

description: Protein transmembrane domains (TMDs) are generally hydrophobic but our bioinformatics analysis shows that many TMDs contain basic residues at terminal regions. Physiological functions of these membrane-snorkeling basic residues are largely unclear. Here we show that a membrane-snorkeling Lys residue in integrin αLβ2 (also known as LFA-1) regulates transmembrane heterodimer formation and integrin adhesion through ionic interplay with acidic phospholipids and Ca2+ in T cells. The amino group of the conserved Lys ionically interacts with the phosphate group of acidic phospholipid to stabilize αLβ2 transmembrane association, thus keeping the integrin at low-affinity conformation. Intracellular Ca2+ uses its charge to directly disrupt this ionic interaction, leading to the transmembrane separation and the subsequent extracellular domain extension to increase adhesion activity. This Ca2+-mediated regulation is independent on the canonical Ca2+ signaling or integrin inside-out signaling. Our work therefore showcases the importance of intramembrane ionic protein-lipid interaction and provides a new mechanism of integrin activation.
DOI: 10.17632/yyd38gx4by.1
title: in-situ DRIFTS data of CO2 capture and methanation over 5% Ru/Al2O3 and 5%Ru,6.1"Na2O"/Al2O3 DFM

description: In-situ DRIFTS study of CO2 capture and methanation over Al2O3, 5% Ru/Al2O3, 6.1% "Na2O"/Al2O3 sorbent phase and 5% Ru-6.1% "Na2O"/Al2O3 DFM. Each experiment was carried out using 35 mg of the sample and in-situ pre-reduce with 20% H2/N2 for 2 hours. The sheets are named according to samples name and data type (raw and processed). Final DRIFTS were obtain by substracting backgroud spectra of the sample at 320 °C under N2.
DOI: 10.5281/zenodo.1460563
title: Sardinia_Tas_Gfdl-Esm2M_Rcp8P5_2006-2099_Monthly.Dat

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5281/zenodo.1460648
title: Sardinia_Rsds_Miroc-Esm-Chem_Rcp8P5_2006-2099_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5281/zenodo.1460649
title: Sardinia_Rsds_Miroc-Esm-Chem_Rcp8P5_2006-2099_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5281/zenodo.1460650
title: Sardinia_Tas_Miroc-Esm-Chem_Historical_1961-2005_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5281/zenodo.1460651
title: Sardinia_Tas_Miroc-Esm-Chem_Historical_1961-2005_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5281/zenodo.1460652
title: Sardinia_Tas_Miroc-Esm-Chem_Rcp2P6_2006-2099_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5281/zenodo.1460653
title: Sardinia_Tas_Miroc-Esm-Chem_Rcp2P6_2006-2099_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.5281/zenodo.1460655
title: Sardinia_Tas_Miroc-Esm-Chem_Rcp4P5_2006-2099_Daily.Nc4

description: ISIMIP-2a climate data cutout provided for Sardinia in the framework of SIM4NEXUS
DOI: 10.13145/bacdive6167.20211221.6
title: Devosia insulae Yoon et al. 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6168.20211221.6
title: Devosia subaequoris Lee 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6169.20211221.6
title: Devosia geojensis Ryu et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6170.20211221.6
title: Devosia chinhatensis Kumar et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6171.20211221.6
title: Devosia yakushimensis Bautista et al. 2010

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6172.20211221.6
title: Devosia glacialis Zhang et al. 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6173.20211221.6
title: Devosia psychrophila Zhang et al. 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6174.20211221.6
title: Dichotomicrobium thermohalophilum Hirsch and Hoffmann 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6175.20211221.6
title: Dichotomicrobium thermohalophilum Hirsch and Hoffmann 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6176.20211221.6
title: Dichotomicrobium thermohalophilum Hirsch and Hoffmann 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6177.20211221.6
title: Filomicrobium fusiforme Schlesner 1988

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6178.20211221.6
title: Hyphomicrobium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6179.20211221.6
title: Hyphomicrobium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6180.20211221.6
title: Hyphomicrobium aestuarii Hirsch 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6181.20211221.6
title: Hyphomicrobium facile Hirsch 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6182.20211221.6
title: Hyphomicrobium zavarzinii Hirsch 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6183.20211221.6
title: Hyphomicrobium methylovorum Izumi et al. 1983

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6184.20211221.6
title: Hyphomicrobium denitrificans Urakami et al. 1995

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6185.20211221.6
title: Hyphomicrobium sulfonivorans Borodina et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6186.20211221.6
title: Prosthecomicrobium polyspheroidum

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6187.20211221.6
title: Rhodoplanes roseus (Janssen and Harfoot 1991) Hiraishi and Ueda 1994

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6188.20211221.6
title: Rhodoplanes roseus (Janssen and Harfoot 1991) Hiraishi and Ueda 1994

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6189.20211221.6
title: Rhodoplanes elegans Hiraishi and Ueda 1994

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6190.20211221.6
title: Rhodoplanes serenus Okamura et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6191.20211221.6
title: Rhodoplanes piscinae Chakravarthy et al. 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6192.20211221.6
title: Rhodomicrobium vannielii Duchow and Douglas 1949

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6193.20211221.6
title: Rhodomicrobium vannielii Duchow and Douglas 1949

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6194.20211221.6
title: Rhodomicrobium vannielii Duchow and Douglas 1949

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6195.20211221.6
title: Rhodomicrobium vannielii Duchow and Douglas 1949

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6196.20211221.6
title: Maritalea myrionectae Hwang et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6197.20211221.6
title: Cucumibacter marinus Hwang and Cho 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6198.20211221.6
title: Pelagibacterium halotolerans Xu et al. 2011

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6199.20211221.6
title: Hirschia baltica Schlesner et al. 1990

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6200.20211221.6
title: Hirschia maritima Kang and Lee 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6201.20211221.6
title: Hyphomonas polymorpha (ex Pongratz 1957) Moore et al. 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6202.20211221.6
title: Hyphomonas polymorpha (ex Pongratz 1957) Moore et al. 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6203.20211221.6
title: Hyphomonas hirschiana Weiner et al. 1985

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6204.20211221.6
title: Hyphomonas jannaschiana Weiner et al. 1985

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6205.20211221.6
title: Hyphomonas neptunium (Leifson 1964) Moore et al. 1984 emend. Li et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6206.20211221.6
title: Hyphomonas oceanitis Weiner et al. 1985

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6207.20211221.6
title: Maricaulis maris (Poindexter 1964) Abraham et al. 1999

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6208.20211221.6
title: Maricaulis maris (Poindexter 1964) Abraham et al. 1999

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6209.20211221.6
title: Maricaulis washingtonensis Abraham et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6210.20211221.6
title: Maricaulis salignorans Abraham et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6211.20211221.6
title: Maricaulis parjimensis Abraham et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6212.20211221.6
title: Maricaulis virginensis Abraham et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6213.20211221.6
title: Oceanicaulis alexandrii Strömpl et al. 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6214.20211221.6
title: Oceanicaulis alexandrii Strömpl et al. 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6215.20211221.6
title: Oceanicaulis alexandrii Strömpl et al. 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.