cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7413284
title: Small mammal survey in Narati (China) and Sary-Mogul (Kyrgyzstan)

description: Field surveys were conducted in September 2006 at Narati (China) and September 2014 at Sary Mogul (Kyrgyzstan) using trapping and transect methods. See dat@osu for general metadata and Marston et al. (2022), cited below (submitted) for sampling details. Narati_transect.csv : transects of over 41 km were surveyed in grassland areas between 1509-3335 m altitude. Each row corresponds to an approximatively 130 m segment, divided into 20 intervals of ten paces. Activity indicators identifiable to species or genus level (including foraging corridors, ground holes, earth tumuli and small mammal faeces) were recorded. The abundance index is the number of intervals where presence indicators were observed divided by the number of intervals walked (n = 20). The geographical coordinates are the centroïd of each segment. Narati_traplines_rd.txt: small mammal relative densities obtained using standard trapping as described in Marston et al. (2022). Sary_Mogul_transect.csv: For each transect, 20 intervals of 10 paces were surveyed with activity indicators identifiable to species or genus level (including foraging corridors, ground holes, earth tumuli and small mammal faeces) recorded. Relative density scores of small mammal presence (the number of intervals where presence indicators were observed) were produced for each species for each transect. In Sary Mogul, field surveys comprised 37 transects as described in Marston and Giraudoux (2019) Sary_Mogul_traplines_rd.txt: small mammal relative densities obtained using standard trapping as described in Marston et al. (2022).
description: {"references": ["Marston CG, Raoul F, Rowland C, Qu\u00e9r\u00e9 JP, Feng XH, Lin RY, Giraudoux P 2023 Mapping small mammal optimal habitats using satellite-derived proxy variables and species distribution model. PLoS One. In pres"]}
DOI: 10.5281/zenodo.6379910
title: Small mammal survey in Narati (China) and Sary-Mogul (Kyrgyzstan)

description: Field surveys were conducted in September 2006 at Narati (China) and September 2014 at Sary Mogul (Kyrgyzstan) using trapping and transect methods. See dat@osu for general metadata and Marston et al. (2022), cited below (submitted) for sampling details. Narati_transect.csv : transects of over 41 km were surveyed in grassland areas between 1509-3335 m altitude. Each row corresponds to an approximatively 130 m segment, divided into 20 intervals of ten paces. Activity indicators identifiable to species or genus level (including foraging corridors, ground holes, earth tumuli and small mammal faeces) were recorded. The abundance index is the number of intervals where presence indicators were observed divided by the number of intervals walked (n = 20). The geographical coordinates are the centroïd of each segment. Narati_traplines_rd.txt: small mammal relative densities obtained using standard trapping as described in Marston et al. (2022). Sary_Mogul_transect.csv: For each transect, 20 intervals of 10 paces were surveyed with activity indicators identifiable to species or genus level (including foraging corridors, ground holes, earth tumuli and small mammal faeces) recorded. Relative density scores of small mammal presence (the number of intervals where presence indicators were observed) were produced for each species for each transect. In Sary Mogul, field surveys comprised 37 transects as described in Marston and Giraudoux (2019) Sary_Mogul_traplines_rd.txt: small mammal relative densities obtained using standard trapping as described in Marston et al. (2022).
description: {"references": ["Marston CG, Raoul F, Rowland C, Qu\u00e9r\u00e9 JP, Feng XH, Lin RY, Giraudoux P 2023 Mapping small mammal optimal habitats using satellite-derived proxy variables and species distribution model. PLoS One. In pres"]}
DOI: 10.6084/m9.figshare.23936823
title: 20230813_starrydata2

description: All data on Starrydata2, a database of experimental properties in the field of inorganic materials
DOI: 10.6084/m9.figshare.23936823.v1
title: 20230813_starrydata2

description: All data on Starrydata2, a database of experimental properties in the field of inorganic materials
DOI: 10.34740/kaggle/dsv/6292567
title: Meta Kaggle ported to MS SQL SERVER 2022 DATABASE
DOI: 10.5281/zenodo.8241829
title: Cortical State

description: Source data files
DOI: 10.5281/zenodo.8241828
title: Cortical State

description: Source data files
DOI: 10.5519/qd.j6a8d3ys
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (47 records)
DOI: 10.34740/kaggle/dsv/6181199
title: Acute gastroenteritis in child
DOI: 10.5281/zenodo.8241872
title: Unmet Risk Index Dataset

description: This dataset contains the generated profiles from the combination of ASCVD and SMART risk calculators. In addition, the Unmet Risk Index value is included at the end of each data row. This data was used in the research paper titled "Medical calculators derived synthetic patients: a novel method for generation of synthetic patient data" in pre-print. The code used to generate these profiles is available on GitHub at: https://github.com/FrancisJMR/unmet-risk-index
DOI: 10.5281/zenodo.8241871
title: Unmet Risk Index Dataset

description: This dataset contains the generated profiles from the combination of ASCVD and SMART risk calculators. In addition, the Unmet Risk Index value is included at the end of each data row. This data was used in the research paper titled "Medical calculators derived synthetic patients: a novel method for generation of synthetic patient data" in pre-print. The code used to generate these profiles is available on GitHub at: https://github.com/FrancisJMR/unmet-risk-index
DOI: 10.5281/zenodo.10406597
title: OMAP-8: Multiplexed Antibody-Based Imaging of Placenta with Imaging Mass Cytometry (IMC), v1.0

description: OMAP-8 was designed for Imaging Mass Cytometry (IMC) (https://pubmed.ncbi.nlm.nih.gov/24584193/) of formalin-fixed paraffin-embedded (FFPE) human term-placenta samples. The tissue slides were prepared with a two-step antigen retrieval process (pH 6 and pH 9, as described https://dx.doi.org/10.17504/protocols.io.bpwumpew). OMAP antibodies validated by immunohistochemistry and IMC were conjugated to polymers containing metal isotopes. Conjugated antibodies were used to stain processed human term-placenta tissue simultaneously. Regions of the processed tissue were then acquired on the imaging mass cytometer (Hyperion; Standard BioTools) by laser ablation and visualized. The panel contains 26 antibodies conjugated to unique metal isotopes and iridium marks the DNA. This OMAP provides a spatial context for key placenta cell types in the ASCT+B v.1.0 table. Single-cell RNA sequencing data were used to guide marker selection for multiplexed tissue imaging. For example, ASCL2, HLA-G, PD-L1, CD68 and LYVE1 allow functionally specialized cell types to be visualized and quantified in the placenta. Note that one of our core antibodies is to LYVE1 but, unlike in other tissues where it is used to mark lymphatic vasculature, here we use it to mark the macrophage of the placenta (Hofbauer cells) – there should be no lymphatics in the placenta.
DOI: 10.5281/zenodo.10406748
title: Molecular dynamics simulation of human ρ1 GABAA receptor with neurosteriod pregnenolone sulfate

description: Molecular dynamics simulation trajectory, parameter files for the systems of human ρ1 GABAA receptor with neurosteriod pregnenolone sulfate. Pregnenolone sulfate was tested with two different poses, either sulfate group "up" or "down".
DOI: 10.5281/zenodo.10406747
title: Molecular dynamics simulation of human ρ1 GABAA receptor with neurosteriod pregnenolone sulfate

description: Molecular dynamics simulation trajectory, parameter files for the systems of human ρ1 GABAA receptor with neurosteriod pregnenolone sulfate. Pregnenolone sulfate was tested with two different poses, either sulfate group "up" or "down".
DOI: 10.21942/uva.24867141
title: Database papers

description: This database holds the papers that were included in the literature review after performing a keyword search in Web of Science and Scopus. Inclusion criteria were used to select the papers into the database.
DOI: 10.21942/uva.24867141.v1
title: Database papers

description: This database holds the papers that were included in the literature review after performing a keyword search in Web of Science and Scopus. Inclusion criteria were used to select the papers into the database.
DOI: 10.5281/zenodo.10406561
title: Dataset from 'Topological interfaces crossed by defects and textures of continuous and discrete point group symmetries in spin-2 Bose-Einstein condensates'

description: Dataset associated with the publication 'Topological interfaces crossed by defects and textures of continuous and discretepoint group symmetries in spin-2 Bose-Einstein condensates' in Physical Review Research.  Source data for Figures 3-8 in the manuscript.
DOI: 10.5281/zenodo.10406562
title: Dataset from 'Topological interfaces crossed by defects and textures of continuous and discrete point group symmetries in spin-2 Bose-Einstein condensates'

description: Dataset associated with the publication 'Topological interfaces crossed by defects and textures of continuous and discretepoint group symmetries in spin-2 Bose-Einstein condensates' in Physical Review Research.  Source data for Figures 3-8 in the manuscript.
DOI: 10.5281/zenodo.10406795
title: IODP Expedition 383 Magnetic remanence (spinner)

description: Magnetic remanence was measured on discrete samples by an Agico JR-6A spinner magnetometer, first as natural remanent magnetization (NRM) and then after demagnetization or remagnetization steps were performed on the samples (e.g., alternating field [AF] demagnetization, thermal demagnetization [TD], or isothermal remanent magnetization [IRM]).
DOI: 10.5281/zenodo.10406796
title: IODP Expedition 383 Magnetic remanence (spinner)

description: Magnetic remanence was measured on discrete samples by an Agico JR-6A spinner magnetometer, first as natural remanent magnetization (NRM) and then after demagnetization or remagnetization steps were performed on the samples (e.g., alternating field [AF] demagnetization, thermal demagnetization [TD], or isothermal remanent magnetization [IRM]).
DOI: 10.2908/iww_eq_power_ag
title: Power of self-propelled vessels, tugs and pushers by date of construction
title: Puissance des bateaux automoteurs, des remorqueurs et des pousseurs par date de construction
title: Leistung der Gütermotorschiffe und Schleppboote, Schubboote und Schub-Schleppboote nach Baujahr
DOI: 10.5281/zenodo.10406805
title: IODP Expedition 383 X-ray diffraction (XRD)

description: X-ray diffraction (XRD) is used to identify minerals and their proportions in sediment or hard rock sample powders on a Bruker AXS D4 Endeavor X-ray diffractometer. Results are returned as diffractograms in a viewable format (either PDF or PNG).
DOI: 10.5281/zenodo.10406806
title: IODP Expedition 383 X-ray diffraction (XRD)

description: X-ray diffraction (XRD) is used to identify minerals and their proportions in sediment or hard rock sample powders on a Bruker AXS D4 Endeavor X-ray diffractometer. Results are returned as diffractograms in a viewable format (either PDF or PNG).
DOI: 10.5281/zenodo.10406865
title: microcambeva_ribeirae_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.10406866
title: microcambeva_ribeirae_zanfona_1.fasta.gz

description: .
DOI: 10.5519/qd.inj16hnu
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5740200 records)
DOI: 10.5281/zenodo.10405662
title: Supplementary Tables for Epilepsy Manuscript

description: Supplementary tables for the epilepsy manuscript
DOI: 10.5281/zenodo.10405663
title: Supplementary Tables for Epilepsy Manuscript

description: Supplementary tables for the epilepsy manuscript
DOI: 10.5281/zenodo.10406803
title: IODP Expedition 383 Thin section images

description: Hard rock and sediment thin section images were acquired using either the JRSO-developed Petrographic Image Capture and Archival Tool (PICAT) imager or (rarely) an upright microscope and a digital camera. Sample images are acquired in unpolarized, polarized, and/or cross-polarized light. Image files are presented compressed by hole.
DOI: 10.5281/zenodo.10406804
title: IODP Expedition 383 Thin section images

description: Hard rock and sediment thin section images were acquired using either the JRSO-developed Petrographic Image Capture and Archival Tool (PICAT) imager or (rarely) an upright microscope and a digital camera. Sample images are acquired in unpolarized, polarized, and/or cross-polarized light. Image files are presented compressed by hole.
DOI: 10.5281/zenodo.10406801
title: IODP Expedition 383 Thermal conductivity

description: Thermal conductivity was measured using the heated needle method in either full-space needle configuration (soft/saturated sediments) or half-space needle configuration (harder materials) of a TeKa Berlin TK-04 thermal conductivity meter. Heat is applied to the sample and then thermal equilibrium is sought. The heating and equilibration curve is reduced to derive the thermal conductivity value. Raw data are stored if a user wishes to do off-line or postexpedition reduction.
DOI: 10.5281/zenodo.10406802
title: IODP Expedition 383 Thermal conductivity

description: Thermal conductivity was measured using the heated needle method in either full-space needle configuration (soft/saturated sediments) or half-space needle configuration (harder materials) of a TeKa Berlin TK-04 thermal conductivity meter. Heat is applied to the sample and then thermal equilibrium is sought. The heating and equilibration curve is reduced to derive the thermal conductivity value. Raw data are stored if a user wishes to do off-line or postexpedition reduction.
DOI: 10.6084/m9.figshare.24867165
title: Drug response data

description: preprocessed GDSC drug response data Raw data source: https://www.cancerrxgene.org/downloads/bulk_download Subset to the record with a higher AUC value If multiple entries are found for a given cell line and drug in the metadata.<br>
DOI: 10.7924/r4fj2p49s
title: Data from: Distribution and homogenization of multiple mercury species inputs to freshwater wetland mesocosms

description: Mercury (Hg)-impaired aquatic ecosystems often receive multiple inputs of different Hg species with varying potentials for transformation and bioaccumulation. Over time, these distinct input pools of Hg homogenize in their relative distributions and bioaccumulation potentials as a result of biogeochemical processes and other aging processes within the ecosystem. This study sought to evaluate the relative timescale for homogenization of multiple Hg inputs to wetlands, information that is relevant for ecosystem management strategies that consider Hg source apportionment. We performed experiments in simulated freshwater wetland mesocosms that were dosed with four isotopically labeled mercury forms: two dissolved (Hg2+ and Hg-humic acid) and two particulate (nano-HgS and Hg adsorbed to FeS). Over the course of one year, we monitored the four Hg isotope endmembers for their relative distribution between surface water, sediment, and fish in the mesocosms, partitioning between soluble and particulate forms, and conversion to methylated mercury (MeHg). We also evaluated the reactivity and mobility of Hg through sequential selective extractions (SSE) of sediment and uptake flux of aqueous Hg in diffusive gradient in thin-film (DGT) passive samplers. We observed that the four isotope spikes were relatively similar in surface water concentration (ca. 3000 ng/L) immediately after spike addition. At 1 to 3 months after dosing, Hg concentrations were 1 to 50 ng/L and were greater for the initially dissolved isotope endmembers than the initially particulate endmembers. In contrast, the Hg isotope endmembers in surface sediments were similar in relative concentration within 2 months after spike addition. However, the uptake fluxes of the Hg in DGT samplers, deployed in both the water column and surface sediment, were generally greater for initially dissolved Hg endmembers and lower for the initially particulate endmembers. At one year post-dosing, the DGT-uptake fluxes were converging toward similar values between the Hg isotope endmembers. However, the relative distribution of isotope endmembers were still significantly different in both the water column and sediment (p<0.01 according to one-way ANOVA analysis). In contrast, SSE resulted in a homogenous distribution with >90% of each endmember extracted in the KOH fraction, suggesting that Hg species were associated with sediment organic matter. For MeHg concentrations in surface sediment and fish, the relative contributions from each endmember were significantly different at all sampling time points. Altogether, these results provide insights to the timescales of distribution for different Hg species that enter a wetland ecosystem. While these inputs attain homogeneity in concentration in primary storage compartments (i.e., sediments) within weeks after addition, these input pools remain differentiated for more than one year in terms of reactivity for passive samplers, MeHg concentration and bioaccumulation.
DOI: 10.5525/gla.researchdata.1508
title: Reynolds number dependency of wall-bounded turbulence over a surface partially covered by barnacle clusters

description: Research data to underpin research article. Detailed description of contents in documentation file.
DOI: 10.6084/m9.figshare.19193111
title: Performance of Prehospital Use of Chest Pain Risk Stratification Tools: The RESCUE Study

description: Emergency medical services (EMS) assesses millions of patients with chest pain each year. However, tools validated to risk stratify patients for acute coronary syndrome (ACS) and pulmonary embolism (PE) have not been translated to the prehospital setting. The objective of this study is to assess the prehospital performance of risk stratification scores for 30-day major adverse cardiac events (MACE) and PE. A prospective observational cohort study of patients ≥21 years of age with acute chest pain who were transported by EMS in two North Carolina (NC) counties was conducted from 18 April 2018–2 January 2019. In this convenience sample, paramedics completed HEAR (history, electrocardiogram, age, risk factor), ED Assessment of Chest Pain Score (EDACS), Revised Geneva Score (RGS), and pulmonary embolism rule-out criteria (PERC) assessments on each patient. MACE (all-cause death, myocardial infarction, and revascularization) and PE at 30 days were determined by hospital records and NC Death Index. The positive (+LR) and negative likelihood ratios (−LR) of the risk scores for 30-day MACE and PE were calculated. During the study period, 82.1% (687/837) patients had all four risk score assessments. The cohort was 51.1% (351/687) female, 49.5% (340/687) African American, and had a mean age of 55.0 years (SD 16.0). At 30 days, MACE occurred in 7.4% (51/687), PE occurred in 0.9% (6/687), and the combined outcome occurred in 8.2% (56/687). The HEAR score had a − LR of 0.46 (95% CI 0.27–0.78) and + LR of 1.48 (95% CI 1.26–1.74) for 30-day MACE. EDACS had a − LR of 0.61 (95% CI 0.46–0.81) and + LR of 2.53 (95% CI 1.86–3.46) for 30-day MACE. The PERC score had a − LR of 0 (95% CI 0.0–1.4) and a + LR of 1.38 (95% CI 1.32–1.45) for 30-day PE. The RGS score had a − LR of 0 (95% CI 0.0–0.65) and a + LR of 2.36 (95% CI 2.16–2.57) for 30-day PE. The combination of a low-risk HEAR score and negative PERC evaluation had a − LR of 0.25 (95% CI 0.08–0.76) and a + LR of 1.21 (95% CI 1.21–1.30) for 30-day MACE or PE. The combination of a paramedic-obtained HEAR score and PERC evaluation performed best to exclude 30-day MACE and PE but was not sufficient for directing prehospital decision making.
DOI: 10.6084/m9.figshare.21388899
title: Diversity, Equity, and Inclusion in the United States Emergency Medical Services Workforce: A Scoping Review

description: Emergency medical services (EMS) workforce demographics in the United States do not reflect the diversity of the population served. Despite some efforts by professional organizations to create a more representative workforce, little has changed in the last decade. This scoping review aims to summarize existing literature on the demographic composition, recruitment, retention, and workplace experience of underrepresented groups within EMS. Peer-reviewed studies were obtained from a search of PubMed, CINAHL, Web of Science, ProQuest Thesis and Dissertations, and non-peer-reviewed (“gray”) literature from 1960 to present. Abstracts and included full-text articles were screened by two independent reviewers trained on inclusion/exclusion criteria. Studies were included if they pertained to the demographics, training, hiring, retention, promotion, compensation, or workplace experience of underrepresented groups in United States EMS by race, ethnicity, sexual orientation, or gender. Studies of non-EMS fire department activities were excluded. Disputes were resolved by two authors. A single reviewer screened the gray literature. Data extraction was performed using a standardized electronic form. Results were summarized qualitatively. We identified 87 relevant full-text articles from the peer-reviewed literature and 250 items of gray literature. Primary themes emerging from peer-reviewed literature included workplace experience (n = 48), demographics (n = 12), workforce entry and exit (n = 8), education and testing (n = 7), compensation and benefits (n = 5), and leadership, mentorship, and promotion (n = 4). Most articles focused on sex/gender comparisons (65/87, 75%), followed by race/ethnicity comparisons (42/87, 48%). Few articles examined sexual orientation (3/87, 3%). One study focused on telecommunicators and three included EMS physicians. Most studies (n = 60, 69%) were published in the last decade. In the gray literature, media articles (216/250, 86%) demonstrated significant industry discourse surrounding these primary themes. Existing EMS workforce research demonstrates continued underrepresentation of women and nonwhite personnel. Additionally, these studies raise concerns for pervasive negative workplace experiences including sexual harassment and factors that negatively affect recruitment and retention, including bias in candidate testing, a gender pay gap, and unequal promotion opportunities. Additional research is needed to elucidate recruitment and retention program efficacy, the demographic composition of EMS leadership, and the prevalence of racial harassment and discrimination in this workforce.