cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/yg333b6j3b.1
title: Proteome-Wide Bioinformatic Annotation and Functional Validation of the Monotopic Phosphoglycosyl Transferase Superfamily

description: Optimized Sequence Similarity Networks (SSNs) of the SmPGT family allowing for functional annotation of clusters as validated in the published work. 

Datasets S1-S4 and S6 can all be visualized using Cytoscape. Dataset S1 is the network file for the E-value 1x 10-61, 100% representative node SmPGT network. Dataset S2 is the Cytoscape session file, with applied coloring, of the E-value 1x 10-61, 100% representative node SmPGT network. Dataset S3 is the network file for the E-value 1x 10-71, 100% representative node SmPGT network. Dataset S4 is the Cytoscape session file, with applied coloring, of the E-value 1x 10-61, 100% representative node SmPGT network. Dataset_5 is the Genome Neighbourhood Network of the E-71 SSN, viewable as diagrams on the EFI-EST server. Dataset_S6 is Genome Neighbourhood Diagrams of the clusters from the E-71 SSN, with the clusters as hub-nodes and neighbouring Pfam families as spoke-nodes
DOI: 10.17632/pjtyzgxwwp.1
title: Heavy Sulfur Isotopes at Etinde, Cameroon Volcanic Line

description: We present a sulfur isotope dataset for lavas from Etinde, a volcano of the Cameroon Volcanic Line. We measured sulfur isotope compositions with an aim to characterise the geochemical reservoir the sulfur came from. We also provide some whole rock geochemical data for context.

Major-element compositions were determined by X-Ray Fluorescence (XRF) spectrometry at the University of Edinburgh, and trace element concentrations were determined by Inductively-Coupled Plasma Mass Spectrometry (ICP-MS) at the Scottish Universities Environmental Research Centre (SUERC). Sulfur concentrations were measured using combustion ion-chromatography at Universität Tübingen. Sulfate phases were dissolved in cold HCl at the University of Edinburgh using a method proposed by Renzulli et al., (1998) and solutions were analysed at the stable isotope facility at SUERC. Sulfide samples were prepared and analysed at the University of St Andrews following Canfield et al., 1986. Sulfide δ34S was calculated by mass-balance from measured acid-volatile and chromium-reducible sulfide components. Mass balance was also used to calculate bulk δ34S from sulfide and sulfate δ34S. 

Bulk δ34S which best represents Etinde magmatic values ranges from +3.7‰ to +6.3‰, a heavier signature than MORB and most other alkaline igneous rocks. We show that the most mafic Etinde samples are highly degassed, a process which affected their S-isotope composition. We suggest that assimilation of evaporite in shallow magma reservoirs or the involvement of a metasomatic carbonate component in the mantle source may explain these positive values.
DOI: 10.17632/pjtyzgxwwp.5
title: Isotopically heavy sulfur in nephelinite from Etinde, Cameroon Volcanic Line

description: We present a sulfur isotope dataset for lavas from Etinde, a volcano of the Cameroon Volcanic Line. We measured sulfur isotope compositions with an aim to characterise the geochemical reservoir the sulfur came from. We also provide some whole rock geochemical data for context.

Major-element compositions were determined by X-Ray Fluorescence (XRF) spectrometry at the University of Edinburgh, and trace element concentrations were determined by Inductively-Coupled Plasma Mass Spectrometry (ICP-MS) at the Scottish Universities Environmental Research Centre (SUERC). Sulfur concentrations were measured using combustion ion-chromatography at Universität Tübingen. Sulfate phases were dissolved in cold HCl at the University of Edinburgh using a method proposed by Renzulli et al., (1998) and solutions were analysed at the stable isotope facility at SUERC. Sulfide samples were prepared and analysed at the University of St Andrews following Canfield et al., 1986. Sulfide δ34S was calculated by mass-balance from measured acid-volatile and chromium-reducible sulfide components. Mass balance was also used to calculate bulk δ34S from sulfide and sulfate δ34S. 

Bulk δ34S which best represents Etinde magmatic values ranges from +3.7‰ to +6.3‰, a heavier signature than MORB and most other alkaline igneous rocks. We show that the most mafic Etinde samples are highly degassed, a process which affected their S-isotope composition. We suggest that assimilation of evaporite in shallow magma reservoirs or the involvement of a metasomatic carbonate component in the mantle source may explain these positive values.
DOI: 10.17632/pjtyzgxwwp.6
title: Isotopically heavy sulfur in nephelinite from Etinde, Cameroon Volcanic Line: implications for the origin of intraplate magmatism

description: We present a sulfur isotope dataset for lavas from Etinde, a volcano of the Cameroon Volcanic Line. We measured sulfur isotope compositions with an aim to characterise the geochemical reservoir the sulfur came from. We also provide some whole rock geochemical data for context.

Major-element compositions were determined by X-Ray Fluorescence (XRF) spectrometry at the University of Edinburgh, and trace element concentrations were determined by Inductively-Coupled Plasma Mass Spectrometry (ICP-MS) at the Scottish Universities Environmental Research Centre (SUERC). Sulfur concentrations were measured using combustion ion-chromatography at Universität Tübingen. Sulfate phases were dissolved in cold HCl at the University of Edinburgh using a method proposed by Renzulli et al., (1998) and solutions were analysed at the stable isotope facility at SUERC. Sulfide samples were prepared and analysed at the University of St Andrews following Canfield et al., 1986. Sulfide δ34S was calculated by mass-balance from measured acid-volatile and chromium-reducible sulfide components. Mass balance was also used to calculate bulk δ34S from sulfide and sulfate δ34S. 

Bulk δ34S which best represents Etinde magmatic values ranges from +3.7‰ to +6.3‰, a heavier signature than MORB and most other alkaline igneous rocks. We show that the most mafic Etinde samples are highly degassed, a process which affected their S-isotope composition. We suggest that assimilation of evaporite in shallow magma reservoirs or the involvement of a metasomatic carbonate component in the mantle source may explain these positive values.
DOI: 10.17632/pjtyzgxwwp.2
title: Heavy Sulfur Isotopes at Etinde, Cameroon Volcanic Line

description: We present a sulfur isotope dataset for lavas from Etinde, a volcano of the Cameroon Volcanic Line. We measured sulfur isotope compositions with an aim to characterise the geochemical reservoir the sulfur came from. We also provide some whole rock geochemical data for context.

Major-element compositions were determined by X-Ray Fluorescence (XRF) spectrometry at the University of Edinburgh, and trace element concentrations were determined by Inductively-Coupled Plasma Mass Spectrometry (ICP-MS) at the Scottish Universities Environmental Research Centre (SUERC). Sulfur concentrations were measured using combustion ion-chromatography at Universität Tübingen. Sulfate phases were dissolved in cold HCl at the University of Edinburgh using a method proposed by Renzulli et al., (1998) and solutions were analysed at the stable isotope facility at SUERC. Sulfide samples were prepared and analysed at the University of St Andrews following Canfield et al., 1986. Sulfide δ34S was calculated by mass-balance from measured acid-volatile and chromium-reducible sulfide components. Mass balance was also used to calculate bulk δ34S from sulfide and sulfate δ34S. 

Bulk δ34S which best represents Etinde magmatic values ranges from +3.7‰ to +6.3‰, a heavier signature than MORB and most other alkaline igneous rocks. We show that the most mafic Etinde samples are highly degassed, a process which affected their S-isotope composition. We suggest that assimilation of evaporite in shallow magma reservoirs or the involvement of a metasomatic carbonate component in the mantle source may explain these positive values.
DOI: 10.6084/m9.figshare.24613086
title: 23/03/2023 - Sale Grammar

description: 23/03/2023 - Sale GrammarDelivery:x1 1 hour lecture and x1 1.5 hour workshop on Olive Schreiner, Postcolonialism, and Marxism (AQA B)17 students; 1 teacher.Data:Student PostcardsStudent QuestionnairesTeacher Questionnaire
DOI: 10.6084/m9.figshare.24613086.v1
title: 23/03/2023 - Sale Grammar

description: 23/03/2023 - Sale GrammarDelivery:x1 1 hour lecture and x1 1.5 hour workshop on Olive Schreiner, Postcolonialism, and Marxism (AQA B)17 students; 1 teacher.Data:Student PostcardsStudent QuestionnairesTeacher Questionnaire
DOI: 10.17632/56bsy9sj74.1
title: On the effects of income heterogeneity in monopolistically competitive markets

description: This repository includes the files to replicate Figure 1 and Tables 6 and 7 of the paper titled "On the effects of income heterogeneity in monopolistically competitive markets" published in the Journal of International Economics.
DOI: 10.17632/nzkm54gj4b.1
title: The effects of relative humidity and salt concentration on the diameter of hydrophilic polymeric nanofibers obtained by electrospinning: synergistic effect study by Central Composite Design (CCD). Supplementary Material

description: Results of the 39 experiments of CCD
The next micrograph show the experiments of PVA, PVP and PEO fibers obtained by electrospinning technique with and without HAuCl4•3H2O
Table 1 and 2 shows. The summary of mean diameter of the fibers obtained by 3 micrograph in three different pints and its respective standard deviations at different Relative Humidity (%)/Temperature (°C) ratio. No fibers were obtained for PVP as show in Figure 3.
DOI: 10.17632/9prftpkdfc.1
title: A field experiment on attracting crowdfunders

description: This folder contains the final dataset (datasetfinal.dta), as well as Stata code (analysis01.do) to replicate the statistical analysis of the following paper:

Hornuf & Siemroth (2023): "A field experiment on attracting crowdfunders", Economics Letters, 222, 110928.

Abstract: In a field experiment, we tracked whether crowdfunders clicked on a newsletter link to a new project and whether they invested. In terms of clicks, we find that crowdfunders overall respond most to an environmental framing, while older crowdfunders respond more to a financial framing than younger ones, and men respond less to a financial framing than women. There were no significant differences in terms of investments.

The paper is obtainable for free via open access at: https://doi.org/10.1016/j.econlet.2022.110928

This work was supported by the Economic and Social Research Council [grant number ES/T015357/1] and the German Federal Ministry of Education and Research [grant number 031B0781A].

*****************************
1 TERMS OF USE
*****************************
Feel free to use the data or the Stata code in any way you see fit, provided you give credit in any output by citing:

Hornuf & Siemroth (2023): "A field experiment on attracting crowdfunders", Economics Letters, 222, 110928.

*****************************
2 CONTENTS
*****************************
The folder contains the final dataset "datasetfinal.dta" in the Stata format, which is used to replicate the statistical analyses using the code in analysis01.do.

The PDF of the paper is in the docs subfolder. These contain details about the experimental design.

*****************************
3 HOW TO USE
*****************************
- Unpack the folder somewhere locally

- open "analysis01.do" contained therein in Stata. Tested in Stata 17.0, but will likely work in other versions

- IMPORTANT: At the top of the do-file, change the line 

cd "C:\Users\cs16004\Desktop\Hornuf & Siemroth 2023 data"

to

cd "YOURPATH"

where YOURPATH is the path to the local directory you unpacked the folder to. This needs to be correct for the do-file to find the data

- now run the do-file in Stata (ctrl+d), which runs the statistical analyses and creates the tables from the paper

- "analysis01.do" might some user-written Stata commands. If not installed, these will cause an error. Fix this by installing the user-written commands via ssc or similar

- note: table layouts may not look exactly like the published versions, as the journal changed layouts

- note: tables will be written in latex format into the "tables" subfolder
DOI: 10.17632/phc8pp4mzn.1
title: LINF_090019500

description: AAA family ATPase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/7bymvktmc3.1
title: API clinical trial dataset

description: The dataset includes immune readouts for API trial assessing the impact of antimicrobial treatments on penile ex vivo HIV susceptibility and immunology. This phase 1/2 clinical trial randomized HIV-uninfected Ugandan men (n=125) to either oral tinidazole, topical metronidazole, topical clindamycin or topical hydrogen peroxide to define impact on ex vivo foreskin HIV susceptibility, penile immunology and BASIC species density. Details are provided at ClinicalTrials.gov #NCT03412071. Groups within the dataset are as follows: 1=control, 2=oral tinidazole, 3=topical clindamycin, 4=topical hydrogen peroxide, 5=topical metronidazole.
DOI: 10.6084/m9.figshare.24611961
title: 23/04/2023 - Blackburn College

description: 23/04/2023 - Blackburn CollegeDelivery:x1 1 hour lecture and x1 1.5 hour workshop on Olive Schreiner, Postcolonialism, and Marxism (AQA B)16 students; 1 teacher.Data:Student PostcardsStudent QuestionnairesTeacher Questionnaire
DOI: 10.6084/m9.figshare.24611961.v1
title: 23/04/2023 - Blackburn College

description: 23/04/2023 - Blackburn CollegeDelivery:x1 1 hour lecture and x1 1.5 hour workshop on Olive Schreiner, Postcolonialism, and Marxism (AQA B)16 students; 1 teacher.Data:Student PostcardsStudent QuestionnairesTeacher Questionnaire
DOI: 10.17632/25skyj7k2t.1
title: Carbon Nanotube Bundle Microstructure Micromechanics Simulations

description: The dataset contains carbon nanotube (CNT) bundle microstructures and their bulk elastic properties. The bulk elastic properties were determined using finite element simulations, as described in DeMille et al. (pending publication). Bulk elastic properties for each microstructure include three elastic moduli, three shear moduli, and six Poisson's ratios. Full details of the microstructures and simulations are provided in DeMille et al. (pending publication).
DOI: 10.17632/fs5y6ggskv.1
title: Data associated with: "Fertility protection during chemotherapy treatment by boosting the NAD(P)+ metabolome" by Ho and Marinova et al, 2024

description: Raw data and scripts used to reproduce figures shown in the manuscript "Fertility protection during chemotherapy treatment by boosting the NAD(P)+ metabolome" by Ho and Marinova et al, 2024. Create a new R project and download all files below to the new directory, load and run the two R scripts below to reproduce all data processing, statistical analysis and generate figures in this paper.
DOI: 10.17632/c2txddg6j3.1
title: LINF_090021600

description: SET10; Leishmania infantum (strain JPCM5)
DOI: 10.17632/7ftbb5gyyt.1
title: LINF_090020300

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/6h3npxnmv2.1
title: RPB1 immunofluorescence in HEK293 ARMC5 knockout cells treated with transcriptional inhibitors

description: HEK293 cells or ARMC5 K.O. cells were fixed in 4% paraformaldehyde (EMS Emgrid 15710) for 15 minutes, then permeabilised in 0.25% Triton X100 (Sigma Aldrich 93443) for 10 minutes. Cells were incubated in 50% blocking buffer (Millenium Biosciences Li-Cor Intercept in PBS, LCR-927-70001) in PBS for 30 minutes, before being stained with primary antibodies in 50% blocking buffer in PBS for 90 minutes. Cells were then incubated for 30 minutes with secondary antibodies plus DAPI at 200 ng/mL in 50% blocking buffer in PBS. imaging was performed on a Nikon Ti2 microscope equipped with a Yokogawa CSU-W1 spinning disk, with 40x/NA0.95 Plan Apo λ air objective, and dual Hamamatsu ORCA-Fusion C14440-20UP cameras. 20 z-planes at 1 µm intervals were acquired. DAPI DNA stain was acquired with a 405 nm laser and 450/82 nm filter. Alexa488+ conjugated secondary antibodies were acquired with a 488 nm laser and 525/50 nm filter, and mCherry-RPB1 was acquired with a 561 nm laser and 617/73 nm filter. Where applicable, Alexa488-NHS or Alexa647-NHS cell stains were acquired with the appropriate green (525/50 nm) or far-red (685/40 nm) filter.
DOI: 10.17632/75fwd963gb
title: LDHU3_20.1370

description: P-loop NTPase-like protein
Leishmania donovani (HU3 strain)
DOI: 10.17632/75fwd963gb.1
title: LDHU3_20.1370

description: P-loop NTPase-like protein
Leishmania donovani (HU3 strain)
DOI: 10.17632/hmcrbv6mbf
title: LDHU3_20.1360

description: WDR24
Leishmania donovani (HU3 strain)
DOI: 10.17632/hmcrbv6mbf.1
title: LDHU3_20.1360

description: WDR24
Leishmania donovani (HU3 strain)
DOI: 10.6084/m9.figshare.24611232
title: 15/03/2023 - Rochdale Sixth Form College

description: 15/03/2023 - Rochdale Sixth Form College.Delivery:x1 1 hour lecture and x1 1.5 hour workshop on James Joyce and Olive Schreiner7 students; 1 teacher.Data:Student PostcardsStudent QuestionnairesTeacher Questionnaire<br>
DOI: 10.15468/dl.refb5b
title: Occurrence Download

description: A dataset containing 2720 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dolichophis jugularis (Linnaeus, 1758)"
 ]
}

 The dataset includes 2720 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004498-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24611232.v1
title: 15/03/2023 - Rochdale Sixth Form College

description: 15/03/2023 - Rochdale Sixth Form College.Delivery:x1 lecture on James Joyce and Olive Schreiner7 students; 1 teacher.Data:Student PostcardsStudent QuestionnairesTeacher Questionnaire
DOI: 10.17632/nnr7xnfybc.1
title: Seawater chemical parameters in April 2023 in the Bohai and Yellow Seas

description: This data supports the article "Acidification state and interannual variability in marginal sea: A case study of the Bohai and the Yellow Seas surface waters in April 2023". The data was collected from April 12 to April 28, 2023, by R/V Blue Ocean 101, covering a total of 46 stations. Parameters measured include surface and bottom temperature, salinity, pH (Total scale), TA, DIC, Ωarag, NO3-, PO43-, NO2-, NH4+, SIO3-, DO, DO%, Chl-a, and other related parameters. Additionally, this dataset includes data for correlation analysis.
DOI: 10.17632/6rx5wgp75p.1
title: Incidence, risk factors and airway management of postoperative hematoma following anterior cervical spine surgery: a retrospective nested case–control study

description: The aim of this study was to investigate the incidence, risk factors and airway management of postoperative hematoma (HT) following anterior cervical spine surgery (ACSS).
Design: A retrospective nested case–control study.
A longitudinal ACSS cohort was identified from March 2013 to February 2022. Patients with postoperative HT after ACSS were enrolled as the HT group, and others in the cohort without HT were randomly selected as the non-HT group by individually matching at a ratio of 4:1. Subsequently, patients with HT were included in a subgroup for analysis.
DOI: 10.17632/b4c28szwyn.1
title: Conserved role of FOXC1 in TNBC is parallel to FOXA1 in ER+ breast cancer. Ramachandran et al.

description: This dataset contains raw data related to Figure 1 of the linked manuscript. The folder contains uncropped western blot images used in Figure 1A along with a pdf with labelled western blot images. Folder also contains cell count data from three biological replicates used to generate Figure 1B. Folder also contains number of colonies counted in colony forming assays quantified in Figure 1G.
DOI: 10.17632/9w77wjjpz7
title: LDHU3_20.1440

description: Pre-mRNA-splicing factor 38
Leishmania donovani (HU3 strain)
DOI: 10.17632/9w77wjjpz7.1
title: LDHU3_20.1440

description: Pre-mRNA-splicing factor 38
Leishmania donovani (HU3 strain)
DOI: 10.17632/hm48dcmphm
title: LDHU3_20.1420

description: DnaJ domain-containing protein | JDP16 | J16
Leishmania donovani (HU3 strain)
DOI: 10.17632/hm48dcmphm.1
title: LDHU3_20.1420

description: DnaJ domain-containing protein | JDP16 | J16
Leishmania donovani (HU3 strain)
DOI: 10.17632/z9b877xs7f.2
title: Minimally invasive sacrohysteropexy versus vaginal hysterectomy with uterosacral ligament suspension for pelvic organ prolapse: a prospective randomized non-inferiority trial

description: This study is prospective, randomized, controlled, non-inferiority trial to investigate whether minimally invasive Sacrohysteropexy (SH) is non-inferior to Vaginal hysterectomy (VH) with uterosacral ligament suspension (USLS) in women with symptomatic uterovaginal prolapse. We assigned patients to each study arm at a 1:1 ratio in the order of enrollment, based on a single sequence of randomization. The allocation sequence was disguised from all study personnel, including investigators, field staff, and participants, except for independent research personnel in order to prevent selection bias in the patients recruited. Due to two different surgeries, it was difficult to perform blinding. The primary outcome was prolapse recurrence 1 year after surgery. Prolapse recurrence was defined as the presence of prolapse ≥ stage 2 evaluated by the pelvic organ prolapse quantification (POP-Q) system, bothersome vaginal bulge symptoms defined as a response of ‘somewhat’, ‘moderately,’ or ‘quite a bit’ to Question 3 (a bulge or something falling out that can be seen or felt in the vaginal area) on the Pelvic Floor Distress Inventory-20 (PFDI-20), or retreatment for prolapse. The secondary outcomes included operating time, estimated blood loss, length of hospital stay, and operation-related complications. Pain intensity, quality of life (QOL), and activities of daily living (ADL) were evaluated using self-assessment questionnaires.
The visual analog scale (VAS) was used to evaluate postoperative pain intensity at 1 d, 1 week, 1 month, 6 months, and 1 year after surgery. The VAS ranges from 0 to 10, with 0 representing the absence of pain and 10 representing the highest degree of pain [16]. Pelvic floor dysfunction, representing quality of life, was measured using the Korean version of the PFDI-20 [17], comprising 20 questions divided into three subscales: Pelvic Organ Prolapse Distress Inventory-6, Colorectal-Anal Distress Inventory-8, and Urinary Distress Inventory-6. With these inventories, the respondents are asked whether they experience specific symptoms and, if so, the degree to which the symptoms are bothersome on a 4-point scale ranging from “not at all” to “quite a bit.” Each subscale is scored from to 0–100; with higher scores indicating a greater symptom burden. The PFDI-20 total score comprised the sum of these three subscale scores (0–300). The patients completed the PFDI-20 at baseline, 1 month, 6 months, and 1 year after surgery. To assess the activities that support daily life, such as telephone use, shopping, meal preparation, housework, laundry, driving or using public transportation, and financial and medication management, we evaluated the Instrumental Activities of Daily Living (IADL). The total IADL score ranged from 0 (low function) to 8 (high function, independent) .