cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dtqey3
title: Occurrence Download

description: A dataset containing 4687 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Erigeron lonchophyllus Hook., Erigeron tener (A.Gray) A.Gray, Erigeron clokeyi Cronquist, Erigeron clokeyi var. pinzliae G.L.Nesom, Erigeron pygmaeus (A.Gray) Greene, Erigeron compositus Pursh, Erigeron vagus Payson, Erigeron algidus Jeps., Erigeron grandiflorus Hook., Erigeron leiomerus A.Gray, Erigeron uncialis var. conjugans S.F.Blake)",
 "Geometry POLYGON((-180 15, -180 90, -20 90, -40 15, -180 15))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1948",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 4687 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0176290-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n78sg5
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Callianthe megapotamica (A.Spreng.) Dorr)",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 10000",
 "Year is greater than or equal to 1970"
 ]
}

 The dataset includes 60 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0234109-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpbgjr
title: Occurrence Download

description: A dataset containing 10683 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Petrorhagia prolifera (L.) P.W.Ball & Heywood",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10683 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001834-150410134957023/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ydbwkb
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Podocarpus forrestii Craib & W.W.Sm."
 ]
}

 The dataset includes 29 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0176286-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8y4vwv
title: Occurrence Download

description: A dataset containing 225 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Argentina",
 "Country is Chile",
 "Country is Colombia",
 "Country is Ecuador",
 "Country is Bolivia (Plurinational State of)",
 "Country is Peru"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Myriophyllum quitense Kunth",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 225 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025932-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ujvpi
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Podocarpus aracensis de Laub. & Silba"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001834-150422101436696/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.97gesf
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Riccardia aberrans (Steph.) Gradst."
 ]
}

 The dataset includes 24 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0234142-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ugnzv
title: Occurrence Download

description: A dataset containing 235636 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "Country is Greece"
 ]
}

 The dataset includes 235636 records from 179 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001834-150504100648427/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.va2ddh
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Piper zacatense C.DC."
 ]
}

 The dataset includes 140 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0184938-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b1rh4f
title: Occurrence Download

description: A dataset containing 15992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "HasCoordinate is true",
 "TaxonKey is Acridotheres tristis (Linnaeus, 1766)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15992 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025933-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vcjez7
title: Occurrence Download

description: A dataset containing 22471 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Siparunaceae",
 "HasCoordinate is true"
 ]
}

 The dataset includes 22471 records from 164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001834-160430102343922/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tynm6k
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diodia microcarpa K.Schum. ex Glaziou"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0176289-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kcrehb
title: Occurrence Download

description: A dataset containing 15094 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dipodomys merriami merriami"
 ]
}

 The dataset includes 15094 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025936-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.un9c9z
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Astronesthes gibbsi Borodulina, 1992",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001834-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ux949v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diodia mitens Bello"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0176291-230224095556074/datasets/export for details.
DOI: 10.15468/dl.ab2oiz
title: Occurrence Download

description: A dataset containing 4820 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macrophthalmidae"
 ]
}

 The dataset includes 4820 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025937-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.audrf7
title: Occurrence Download

description: A dataset containing 7815690 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7815690 records from 2631 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0176298-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zskhgp
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lepocinclis acus, Lepocinclis, Eunotia pectinalis, Bacillaria ulna, Haematococcus, Mesotaenium, Microspora, Neidium, Netrium, , Penium, Pleurococcus, Pseudendoclonium, , Stauroneis gracilior, , Achnanthes linearioides, Achnanthidium catenatum, Achnanthes eutrophila, Achnanthes straubiana, Frustulia copulata, Aulacoseira granulata, Vibrio paxillifer, Chroodactylon ornatum, Navicula buderi, Cyclotella pseudostelligera, Encyonema mesianum, Pseudostaurosira parasitica, , Gomphonema parvulum lagenula, Gyrosigma scalproides, Achnanthidium hungaricum, Luticola kotschyi, Navicula cryptonella, Cymbella pusilla, Nitzschia paleacea, Nitzschia sigma, Navicula umbonata, Pseudostaurosira brevistriata, Pyxidicula operculata, Nitzschia delognei, Surirella delicatissima, Fragilaria rumpens, Achnanthidium minutissimum, Pseudostaurosira subconstricta, Myriophyllum, Gomphonema gracile, Sellaphora nigri, Achnanthes catenata, Achnanthes minutissima, Achnanthidium linearioides, Achnanthidium straubianum, Amphora copulata, Aphanizomenon, Aphanizomenon flosaquae, Melosira granulata, Bacillaria paradoxa, Vibrio, Chaetomorpha, Chlorogonium, Cladophora fracta, Compsopogon, Compsopogon coeruleus, Craticula buderi, Cylindrocystis brebissonii, Cymbella minuta, Cymbella silesiaca, Desmidium, Discostella pseudostelligera, Discostella stelligera, Dolichospermum, Dolichospermum flosaquae, Dorofeyukea kotschyi, Enteromorpha, Euglena acus, Eunotia sudetica, Exilaria, Exilaria vaucheriae, Fragilaria capucina rumpens, Fragilaria construens, Fragilaria parasitica, Fragilaria tenera, Frustulia adnata, Frustulia crassinervia, Frustulia tugelae, Gonatozygon, Halamphora, Halamphora coffeaeformis, Himantidium, Himantidium exiguum, Karayevia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.1586 -33.5889,28.2048 -32.9007,25.5395 -32.9007,25.5395 -34.1098,25.6468 -34.1222,25.7787 -34.0734,25.7098 -33.9109,25.8639 -33.797,26.4806 -33.8473,27.1586 -33.5889))"
 ]
}

 The dataset includes 73 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026246-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eeywmm
title: Occurrence Download

description: A dataset containing 250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pereskia aculeata",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 250 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026250-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vhpq7r
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pereskia aculeata",
 "Country is Cuba",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026251-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fj7ajj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pereskia aculeata",
 "Country is Congo, Democratic Republic of the",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026252-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12960841
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.9uqgbu
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lepocinclis acus, Lepocinclis, Eunotia pectinalis, Bacillaria ulna, Haematococcus, Mesotaenium, Microspora, Neidium, Netrium, , Penium, Pleurococcus, Pseudendoclonium, , Stauroneis gracilior, , Achnanthes linearioides, Achnanthidium catenatum, Achnanthes eutrophila, Achnanthes straubiana, Frustulia copulata, Aulacoseira granulata, Vibrio paxillifer, Chroodactylon ornatum, Navicula buderi, Cyclotella pseudostelligera, Encyonema mesianum, Pseudostaurosira parasitica, , Gomphonema parvulum lagenula, Gyrosigma scalproides, Achnanthidium hungaricum, Luticola kotschyi, Navicula cryptonella, Cymbella pusilla, Nitzschia paleacea, Nitzschia sigma, Navicula umbonata, Pseudostaurosira brevistriata, Pyxidicula operculata, Nitzschia delognei, Surirella delicatissima, Fragilaria rumpens, Achnanthidium minutissimum, Pseudostaurosira subconstricta, Myriophyllum, Gomphonema gracile, Sellaphora nigri, Achnanthes catenata, Achnanthes minutissima, Achnanthidium linearioides, Achnanthidium straubianum, Amphora copulata, Aphanizomenon, Aphanizomenon flosaquae, Melosira granulata, Bacillaria paradoxa, Vibrio, Chaetomorpha, Chlorogonium, Cladophora fracta, Compsopogon, Compsopogon coeruleus, Craticula buderi, Cylindrocystis brebissonii, Cymbella minuta, Cymbella silesiaca, Desmidium, Discostella pseudostelligera, Discostella stelligera, Dolichospermum, Dolichospermum flosaquae, Dorofeyukea kotschyi, Enteromorpha, Euglena acus, Eunotia sudetica, Exilaria, Exilaria vaucheriae, Fragilaria capucina rumpens, Fragilaria construens, Fragilaria parasitica, Fragilaria tenera, Frustulia adnata, Frustulia crassinervia, Frustulia tugelae, Gonatozygon, Halamphora, Halamphora coffeaeformis, Himantidium, Himantidium exiguum, Karayevia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((18.2339 -32.5266,18.1411 -32.657,18.1007 -32.7021,18.0224 -32.6366,17.8923 -32.6419,17.754 -32.8255,17.7723 -32.9007,20.509 -32.9007,20.509 -28.5786,16.2782 -28.5786,16.4358 -28.7202,16.726 -29.1235,17.1957 -30.3752,17.6655 -31.1743,18.1322 -31.7679,18.2495 -32.2638,18.2339 -32.5266))"
 ]
}

 The dataset includes 55 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026254-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2qdy5k
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phyllanthus boehmii",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 77 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026253-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16961293
title: RRBS data of THP1 after 48h of PMA exposure followed by 72h of normal cell culture media

description: These data characterizes methylation levels in THP-1 macrophages.

THP-1 cells (ATCC TIB-202, USA) were cultured in RPMI-1640 (Gibco, USA) supplemented with 10 % FBS (Gibco, USA) (culture media). Cells were cultured in 75 cm2 flasks at a density < 1 × 106 cells/ml. Cells were differentiated in 12 well plates, with 500,000 cells/ well (127,000 cells/cm2), in the culture media supplemented with 30.9 ng/ml of phorbol 12-myristate 13-acetate (PMA) (Sigma-Aldrich, USA) for 48 h, followed by 72 hours recovery period in standard culture medium.

The preprocessing of the RRBS data has been done using Bismark suite (Krueger and Andrews 2011). The macrophages were exposed to phorbol 12-myristate 13-acetate (PMA) for 48 hours, followed by 72 hours in THP1 culture media made of RPMI and 10%FBS.
DOI: 10.15468/dl.2htynr
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Zaireichthys dorae)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026256-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17054828
title: Code and Data for "When Somatic Attention Creates Sensation: A New Class of Bodily Experience"

description: This repository contains the analysis code and processed/raw data accompanying our manuscript. It provides a fully reproducible pipeline for preparing, clustering, and post-processing sensation reports and shape features, as used in our study.

Contents





Raw data (../raw_data/):





Participant sensation drawings (images, PNG format).


Original descriptor selections (file names, German-language labels preserved).



Demographics and experiment metadata (CSV).






Masks (../masks/):





Body-template masks used for pixel-based analyses.






Scripts (scripts/):





00_Preprocessing.py — Cleans raw data, computes initial descriptor counts, prepares input tables.




01_Prep_Descriptors_for_Clusteranalysis.py — Extracts descriptor co-occurrence data for clustering.




02_Clusteranalysis_by_Descriptors.py — Performs hierarchical clustering on descriptor co-occurrence, outputs centroids and term–cluster assignments.




03_Jaccard.py — Computes Jaccard indices between sensations and descriptor clusters, derives absolute cluster assignments, and sorts/exports sensation-level results.




04_Referred_Sensations.py — Splits sensation images into “referred” vs. “local” categories based on pixel area threshold (20 px).




05–07_Shape_*.py — Detect contours, compute geometric shape features, and cluster shapes.




08_Postprocessing.py — Merges and consolidates all intermediate outputs into final point-, subject-, and sensation-level tables.




All scripts are hands-off (no interactive input required), use relative paths, and produce English-only descriptor outputs.






Results (../results/):





Intermediate and final CSV tables at descriptor-, sensation-, point-, subject-, and shape-level.




Cluster assignments and stability analyses.




Organized masked images (copied into cluster-/category-specific folders).





Requirements





Python ≥ 3.10




Dependencies: pandas, numpy, matplotlib, scikit-learn, seaborn, scipy



Usage

To reproduce the analysis, run the scripts sequentially (00–08) from the scripts/ folder. Intermediate and final outputs will be generated under ../results/.
DOI: 10.5281/zenodo.17054829
title: Code and Data for "When Somatic Attention Creates Sensation: A New Class of Bodily Experience"

description: This repository contains the analysis code and processed/raw data accompanying our manuscript. It provides a fully reproducible pipeline for preparing, clustering, and post-processing sensation reports and shape features, as used in our study.

Contents





Raw data (../raw_data/):





Participant sensation drawings (images, PNG format).


Original descriptor selections (file names, German-language labels preserved).



Demographics and experiment metadata (CSV).






Masks (../masks/):





Body-template masks used for pixel-based analyses.






Scripts (scripts/):





00_Preprocessing.py — Cleans raw data, computes initial descriptor counts, prepares input tables.




01_Prep_Descriptors_for_Clusteranalysis.py — Extracts descriptor co-occurrence data for clustering.




02_Clusteranalysis_by_Descriptors.py — Performs hierarchical clustering on descriptor co-occurrence, outputs centroids and term–cluster assignments.




03_Jaccard.py — Computes Jaccard indices between sensations and descriptor clusters, derives absolute cluster assignments, and sorts/exports sensation-level results.




04_Referred_Sensations.py — Splits sensation images into “referred” vs. “local” categories based on pixel area threshold (20 px).




05–07_Shape_*.py — Detect contours, compute geometric shape features, and cluster shapes.




08_Postprocessing.py — Merges and consolidates all intermediate outputs into final point-, subject-, and sensation-level tables.




All scripts are hands-off (no interactive input required), use relative paths, and produce English-only descriptor outputs.






Results (../results/):





Intermediate and final CSV tables at descriptor-, sensation-, point-, subject-, and shape-level.




Cluster assignments and stability analyses.




Organized masked images (copied into cluster-/category-specific folders).





Requirements





Python ≥ 3.10




Dependencies: pandas, numpy, matplotlib, scikit-learn, seaborn, scipy



Usage

To reproduce the analysis, run the scripts sequentially (00–08) from the scripts/ folder. Intermediate and final outputs will be generated under ../results/.
DOI: 10.5281/zenodo.17054712
title: Bias-Corrected Climate Projections using XSBCK  software for Sudano-sahelian region of Cameroon

description: The dataset was adjusted using the cumulative distribution function transform (CDF-t; Michelangeli et al., 2009) over 1980–2099, combining historical and RCP8.5 runs for precipitation and near-surface maximum and minimum air temperature. Reference observations included Northern Cameroon interpolated rainfall (0.01°; Knops & Lavarenne, 2024) and CHIRTS-daily temperature data (0.05°; Funk et al., 2019). To limit spurious extremes, precipitation values above the 99.98th percentile were masked.