cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/fh5xv7d3zg
title: Numerical code (Python) for transient analysis of step-drawdown test

description: This program (TASHAn, Transient Analysis Step-drawdown test by Hyowon An) was developed for the interpretation of the step-drawdown test data. Original source code was written using Python software (https://www.python.org/). The program can calculate hydraulic parameters (T, r2S, P, C, a, RMSE) from the transient step-drawdown test. (where T: aquifer transmissivity, r: well radius, S: aquifer storativity, P: well loss power, C: well loss coefficient, a: transient well loss shape factor.) Governing equations explaining T, r, S, P and C can be found from previous studies including Jacob (1947). For more information of transient well loss shape factor, please refer to An et al. (2022). 

The datasets below include three files (input.xlsx, TASHAn.py, output.xlsx). The data in the input.xlsx was referred from Clark (1977).  Description of each file is as follows:

1. input.xlsx
1) The 'input.xlsx' includes observed drawdowns[m], elapsed time[min] from the start of step-drawdown test, the number of total test steps[-] and pumping rate[m3/day] for each step.
The column 'B' indicates the elapsed time during the first step of the step-drawdown test and the column 'C' is for the observed drawdown during step 1. Column 'D' and 'E' are reserved for the elapsed time and drawdowns during the step 2. 
2) The cell 'P1' is for assigning the number of total steps of the test and the cell 'P2~P7' is for assigning the average pumping rate for each step.
3) This version of code can evaluate the step-drawdown test with the maximum step number of six. If you have test data with five steps, you can leave as blank for the column 'L' and 'M'.
4) If the step-drawdown test includes some bad data and 'null' data, please fill these cells with value of zero '0'. Then, the code automatically skips these values. 
If you fill any cells outside the black line, the code could have errors. 

2. TASHAn.py
1) Load the source code (TASHAn.py) using Python.
2) There are several modules included in this Code (numpy, lnfit and openpyxl). You can install these modules before running the code.
3) For parameter optimization, this code uses iterative solver. Therefore, the ranges and initial values for each parameter should be assigned before running the model.  You can adjust these parameters by revising the source code ('line 346 ~ 349'.). 
If the initial values of the model is too high or low, the analysis result could be unreasonable. 
*When you running the 'TASHAn.py', the 'input.xlsx' and 'output.xlsx' must be closed. 

3. output.xlsx
If you can change the file name in 'line 399'

Reference.
An H, Ha K, Lee E (2022) Transient analysis of a step-drawdown test using a time-varying well-loss equation, Hydrogeol J. https://doi.org/10.1007/s10040-021-02419-8.
Clark L (1977) The analysis and planning of step drawdown tests, Q J Eng Geol Hydrogeol. 10(2):125-143 
Jacob CE (1947) Drawdown test to determine effective radius of artesian well, Trans Am Soc Civ Eng. 112(1):1047-1064
DOI: 10.17632/sn8gnfj4sy
title: Effect of revegetation method (seedling outplanting versus direct seeding) on holm oak root architecture: implications for restoration success under a global change scenario - DATASET

description: Dataset of the paper.
DOI: 10.6084/m9.figshare.28660787.v1
title: UCM 188.46 digital model and image set

description: UCM 188.46 pterosaur tracks<i>Pteraichnus </i>isp.Summerville Formation, Del Monte MinesOxfordian, Upper Jurassic
DOI: 10.17632/3pdx4p3s9g
title: Discrete Choice Experiment data - Experiment 1

description: Local discrete choice experiment on WTA for wind energy externalities
DOI: 10.17632/n4ptkxb36h
title: Winter-spring drought in Yunnan since the early 19th century and its impact on social governance in China’s southwestern border regions

description: Climate change and variability have been demonstrated in interdisciplinary scholarship to, in some cases, have play a noteworthy role in a number of aspects in human history. Many studies in the climate–history nexus concerns East Asia, but comparatively few the southwestern border areas of China. Although adverse climatic conditions have had profound environment and socio-economic impacts in this vast region, its effects on societal changes in the past remain poorly understood. Here, we present a consistent picture of the environment and socio-economic impacts of drought in the southwestern border areas of China. To this end, we developed a new precipitation reconstruction for the central Yunnan region over the 1814–2022 period. This reconstruction was used to evaluate the duration and severity of droughts. Additionally, we explored the relationship between extreme low precipitation and the outbreak of specific plague (Yersinia pestis) epidemics. Our findings reveal the presence of persistent drought conditions, which presumably contributed to economic and societal instability preceding the Du Wenxiu Uprising (杜文秀起义, 1856–1873), particularly impacting regions reliant on arable and pastoral agriculture. Large-scale peasant uprisings, concurring in time with drought, occurred in the mid-19th century against the backdrop of the repressive tax policies of the late Qing Dynasty. Two to three years after the onset of the Yunnan drought during the period 1814–1900, outbreaks of plague occurred and ongoing armed conflicts favored the spread of the disease. In conclusion, our reconstruction not only underscores the occurrence of recurrent multi-year drought conditions in the region but also suggests a potential key role for climate variability in shaping the socio-economic dynamics of this ecologically fragile area during the 19th century.
DOI: 10.6084/m9.figshare.29042804.v1
title: Real Girls' Talk: Data File with all eligible responses through 5-1-2025

description: This is the raw data file of all respondents up to May 1st, 2025. The only processing to this file is the removal of IP address, geolocation, and response ID information to ensure that the data is fully anonymized, per IRB-approved protocol. An abstract of the study for which this data was gathered follows:<b>Introduction: </b>Trans women live precarious lives. The available literature shows that trans women have a very high unemployment rate (15% or more) and face additional challenges based on their positionality. These challenges can include being forced out of formal employment, legislation that targets their ability to exist equally in public, being rhetorically constructed as monstrous, and rampant discrimination across all spheres.<b>Aim: </b>To overcome the epistemic barriers preventing trans women from being considered as women through demonstration of the real, lived, material conditions they face as assessed through harms, spaces, and time.<b>Method:</b> Using Likert scales, the study measured risks, harms, spaces, and themes, regarding transfeminine precarity, in order to demonstrate whether and to what depth trans women face precarity on the axis of their gender positionality.<b>Results: </b>A total of 84 survey respondents were gathered, across the U.S. from March through May 2024 via multi-modal snowball sampling. Of those, 85 made it through consent and screener questions to the actual study instrument. Notable findings include that more than three out of four trans women (75.0%, n = 57/76) indicated risk of harm due to hypervisibility, nearly one in five trans women (17.3%, n = 14/81) were unemployed over the preceding 3-month period, and less than 6 in 10 ( 55.6%, n = 45/81) were employed full time.<b>Conclusion: </b>Precarity is a state that applies to trans women as a penalty for their gender. Results of the study led to the coining of two terms in Women’s and Gender Studies, “razed memory” and “triple bind,” both of which are discipline-new developments, or frameworks for analysis, by this author- to the best of the author’s knowledge.
DOI: 10.17632/9jkchm9tnw
title: Datasets for Coloured, Standard, and Advanced Progressive Matrices (CPM, SPM, and APM) over 65 years (1950-2014)

description: This datasets contain several key variables and data concerning the studies that investigated IQ indexed by Coloured, Standard, and Advanced Progressive Matrices. The datasets offer 199, 369, and 176 individual samples worldwide, respectively representing a period of 65 years (1950-2014).
DOI: 10.6084/m9.figshare.28987316.v1
title: Pliocene to Holocene deformation and earthquake potential of the Mesamávida fault, West Andean Thrust System of central-southern Chile (36ºS)

description: This is supplementary material for the manuscript submitted to Tectonics titled 'Pliocene to Holocene deformation and earthquake potential of the Mesamávida fault, West Andean Thrust System of central-southern Chile (36ºS)'<br>Crustal reverse faults are recognized for their potential to generate devastating earthquakes, making them a focus of seismic hazard assessment. Along the Chilean Andes, the Western Andean Thrust System (WATS)—a structure marking the Central Valley-Principal Cordillera border—includes several probable late Quaternary faults. However, evidence for large Holocene earthquakes (M~7) has only been confirmed on two faults at ~32-33°S. This study focuses on the WATS at ~36°S, where a hectometer-scale escarpment dominates the border between the Central Valley and Principal Cordillera. LiDAR-derived topography, new geologic mapping of Pliocene to Quaternary units, and morphological analysis reveal that the mountain front and surrounding areas have undergone tectonic deformation since at least the Pliocene. Approximately 200 m west of the mountain front, we mapped a 0.7-to-8.7-m-high fault scarp in alluvial deposits dated at ~14 ka with Optically Stimulated Luminescence (OSL). Morphotectonic analysis of the scarp and faults mapped in two trenches demonstrates that the scarp formed during moderate to large Holocene earthquakes along the newly identified Mesamávida fault. A local seismic network also detected crustal seismicity likely attributable to the fault. At least one branch fault of the WATS at 36°S—the Mesamávida fault—has the potential to generate earthquakes with magnitudes up to ~7.1. The seismic potential of the Mesamávida fault should be incorporated into hazard analyses for central-southern Chile. Study of similar faults within the WATS to the north and south will enhance understanding of this thrust system's seismic hazard and its role in Quaternary tectonics of the Andes.
DOI: 10.6084/m9.figshare.5554450.v1
title: Dataset description file.

description: A text file containing general description-summary of the dataset.
DOI: 10.17632/ykmzxx2mxc
title: Abomasal RNA-seq reveals a strong local cell response of suckling lambs with resistance against Haemonchus contortus

description: Santa Ines (SI) and Ile de France (IF) sheep are known to be resistant and susceptible to H. contortus infection, respectively. Several studies have shown some genes as potential biological markers for sheep resistance against gastrointestinal nematodes using molecular tools, including transcriptomic analysis. In this study, we sequenced the polyadenylated RNA of the abomasal tissue of SI and IF suckling lambs to identify mucosa-specific transcript alterations between breeds artificially infected with H. contortus. Naïve SI (n=4) and IF (n=4) lambs were artificially infected every other day, over a period of 52 days, from 14 to 66 days old, with a total of 5,400 H. contortus infective larvae. Fundic abomasal tissue samples were collected at 68 days old, and submitted to high-throughput RNA sequencing. Differential expression analysis (P value &lt; 0.001 and FDR &lt; 0.05) between SI and IF samples identified 292 genes, most of which showed greater expression in SI lambs. To help annotate and assign possible function to differentially expressed genes (DEGs), we used previously available single-cell RNAseq (scRNAseq) data from ovine abomasal mucosa to putatively identify cell types and possible mechanisms involved in resistance to H. contortus. In particular, genes associated with endothelial and tuft cells showed most increase in expression in SI relative to IF lambs. Santa Ines lambs had higher percentual of tuft cells than IF lambs in the fundic abomasal mucosa. Although we found innate immunity (cell mediated in mucosa) acting as protagonist for impairing H. contortus infection, a stronger acquired immune response was being modulated at an earlier stage by SI lambs. We suggest that the complex connection between innate and adaptive immunities are via cellular antigen processing and presentation (APP). Based on comparison with scRNAseq data, SI lambs showed a robust APP mechanism characterized mainly by greater T cell APP, macrophage differentiation, and cytokine signalling. We identified potential mechanisms and markers to advance knowledge for selection of H. contortus resistance at a very early age, in SI as well as in other commercial sheep breeds.
DOI: 10.6084/m9.figshare.1066108.v1
title: CYP450 80/20 splits

description: Data from an NIH HTS of 17K compounds against five isozymes of cytochrome P450 screening for inhibition. The activity score is taken from the NIH assay and merged with all the 2-D descriptors from the program Molecular Operating Environment (MOE). The datasets are separated by isozyme and then balanced between actives and inactives. Finally the balanced datasets are subject to an 80/20 training/test split. Link to python script of data manipulation...
DOI: 10.6084/m9.figshare.16746073.v1
title: COVID-19 Hospital Admissions Database .xlsx

description: The dataset contains information from a cohort of 799 patients admitted in the hospital for COVID-19, characterized with sociodemographic and clinical data. Retrospectively, from November 2020 to January 2021, data was collected from the medical records of all hospital admissions that occurred from March 1st, 2020, to December 31st, 2020. The analysis of these data can contribute to the definition of the clinical and sociodemographic profile of patients with COVID-19. Understanding these data can contribute to elucidating the sociodemographic profile, clinical variables and health conditions of patients hospitalized by COVID-19. To this end, this database contains a wide range of variables, such as: Month of hospitalization Gender Age group Ethnicity Marital status Paid work Admission to clinical ward Hospitalization in the Intensive Care Unit (ICU)COVID-19 diagnosisNumber of times hospitalized by COVID-19Hospitalization time in daysRisk Classification ProtocolData is presented as a single Excel XLSX file: dataset.xlsx of clinical and sociodemographic characteristics of hospital admissions by COVID-19: retrospective cohort of patients in two hospitals in the Southern of Brazil; Clinical and sociodemographic characteristics of patients admitted by COVID-19: cohort of patients from two hospitals in southern Brazil. Researchers interested in studying the data related to patients affected by COVID-19 can extensively explore the variables described here. Approved by the Research Ethics Committee (No. 4.323.917/2020) of the Federal University of Santa Catarina.<br>
DOI: 10.17632/37ftxhyp4g
title: smart clothing consumer behavior

description: This database contains responses from the behavioral perception of consumers of Lima, Perú with experience in purchasing smart clothing.

We try to evidence the influence of cultural, social, personal, and psychological aspects on consumers' decisions to purchase clothing made with smart textiles. A quantitative approach methodology with a correlational-descriptive scope was used, using a non-experimental and cross-sectional design with consumer data from Metropolitan Lima. The validation was conducted using a survey adapted from a pioneering instrument used in this market. The results provide evidence that the above factors have an impact on the consumer behaviour of smart textile clothing, but at different levels.
DOI: 10.6084/m9.figshare.20069366.v5
title: EPOS Optimization datasets for drones

description: The data illustrates the results of drones distributed sensing obtained from both real scenario and simulation.
DOI: 10.6084/m9.figshare.21678518.v1
title: Prioritizing landscapes to reconcile biodiversity conservation, ecosystem services, and human well-being in India

description: The dataset contains all input files used in the analysis for the paper titled "Prioritizing landscapes to reconcile biodiversity conservation, ecosystem services, and human well-being in India", Srivathsa et al., Nature Sustainability.
DOI: 10.6084/m9.figshare.7892615.v1
title: gVCF_HG01528

description: 1000 Genomes gVCF mapped to hs37d5 for HG01528. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/ch5mt2gtfb
title: SGX-Listed Companies and Their Multilingual Online Presence in Singapore

description: A recent assessment of SGX-listed companies unveiled the extent to which these entities have embraced multilingual strategies on their online platforms. Information gathered by our research team via a desk study shed light on the communication language strategy of these corporations and their endeavors toward inclusive web communication. Read full articles on https://globibo.blog/sgx-listed-companies-and-their-multilingual-online-presence-in-singapore/
DOI: 10.17632/msrh9bf3nm
title: Passenger Loyalty

description: Data taken from passengers
DOI: 10.6084/m9.figshare.24680853.v1
title: Physical activity, sedentary time and mental Health, Casanova et al. 2023

description: GWAS summary statistics for:Effects of physical activity and sedentary time on depression, anxiety and well-being: a bidirectional Mendelian Randomization studyFrancesco Casanova; Jessica O’Loughlin; Vasilis Karageorgiou; Robin N. Beaumont; Jack Bowden; Andrew R. Wood; Jessica TyrrellBMC Medicine
DOI: 10.6084/m9.figshare.29150345.v1
title: 数据和代码： 数据驱动的污水处理系统高效沉淀池建模

description: 代码和数据
DOI: 10.17632/6ksdjgbg4d
title: Data for: Mechanism of Gas Migration Through Microstructure of Cemented Annulus in Deep-water Environment

description: Data for: Mechanism of Gas Migration Through Microstructure of Cemented Annulus in Deep-water Environment
DOI: 10.17632/dym3nfbpnm
title: Mexico and Colombia working-class households unpaid housework

description: This dataset contains information from the Colombian (2016-2017) Time-Use Survey (ENUT in Spanish) and Mexican (2014) Time-Use Survey. This dataset version includes new information, at the household level, of "pure" working-class households, i.e., households with only waged workers. In addition, this version includes relevant codes used in the empirical analysis of this data. The datasets are in STATA (.dta) format while the codes are in STATA (.do) format.
DOI: 10.17632/whtc75rj55
title: An open-source parallel code for computing the spectral fractional Laplacian on 3D complex geometry domains

description: We present a spectral element algorithm and open-source code for computing the fractional Laplacian defined by the eigenfunction expansion on finite 2D/3D complex domains with both homogeneous and nonhomogeneous boundaries. We demonstrate the scalability of the spectral element algorithm on large clusters by constructing the fractional Laplacian based on computed eigenvalues and eigenfunctions using up to thousands of CPUs. To demonstrate the accuracy of this eigen-based approach for computing the factional Laplacian, we approximate the solutions of the fractional diffusion equation using the computed eigenvalues and eigenfunctions on a 2D quadrilateral, and on a 3D cubic and cylindrical domain, and compare the results with the contrived solutions to demonstrate fast convergence. Subsequently, we present simulation results for a fractional diffusion equation on a hand-shaped domain discretized with 3D hexahedra, as well as on a domain constructed from the Hanford site geometry corresponding to nonzero Dirichlet boundary conditions. Finally, we apply the algorithm to solve the surface quasi-geostrophic (SQG) equation on a 2D square with periodic boundaries. Simulation results demonstrate the accuracy, efficiency, and geometric flexibility of our algorithm and that our algorithm can capture the subtle dynamics of anomalous diffusion modeled by the fractional Laplacian on complex geometry domains. The included open-source code is the first of its kind.
DOI: 10.6084/m9.figshare.13146419.v1
title: Gene fitness data for Sphingomonas koreensis DSMZ 15582

description: Fitness data from experiments with a pool of randomly-barcoded transposon mutants of Sphingomonas koreensis DSMZ 15582. The RB-TnSeq data is provided as a gzipped tarball. After unpacking the tarball, view index.html in a web browser for an explanation of the files.
DOI: 10.6084/m9.figshare.26367709.v1
title: Summary statistics from the schizophrenia EAS GWAS meta-analysis and the cross-ancestry GWAS meta-analysis

description: GWAS summary statistics for EAS-ancestry meta-analysis of schizophrenia, including a Chinese cohort (6,741 cases and 9,030 controls) and a recent GWAS reported in EAS (22,778 cases and 35,362 controls) (File name: Chinese_GWAS_adjust_1pc_meta_with_EAS.meta.gz). GWAS summary statistics for cross-ancestry meta-analysis of schizophrenia, including a Chinese GWAS cohort (6,741 cases and 9,030 controls), the PGC3 EUR dataset (53,386 cases and 77,258 controls), PGC3 LAT ancestry dataset (1,234 cases and 3,090 controls), PGC3 AA ancestry dataset (6,152 cases and 3,918 controls), PGC2 EAS population cohort (22,778 cases and 35,362 controls), and the FinnGen biobank project dataset (6,515 cases and 364,160 controls) (File name: LabGWAS_PGC3_PGC2_EAS_FINNGEN_meta.meta.gz).
DOI: 10.6084/m9.figshare.28189130.v2
title: <b>Mineral-bound lipids formation in soils and sediments: the importance of microbial pathways</b>

description: Mineral protection is the most important mechanism for the long-term preservation of soil organic matter (SOM). However, the proportions of mineral-bound organic compounds that have different structures and biological sources in soils remain unclear, impeding a deeper understanding of the mechanisms underlying OM-mineral interactions. Structurally diverse lipids such as fatty acids, tetraethers, and fatty alcohols are very slowly decomposable biomarkers reflecting plant and microbial origin and therefore, are good indicators of the formation mechanisms of organo-mineral associations. Here we used offline pyrolysis to quantify the mineral-bound lipids in soils with increasing water content as well as aquatic sediments. The proportions of mineral-bound microbial lipids were higher than the plant-derived lipids, while the proportions of bound microbial lipids with diverse structures were at a comparable level, indicating that the importance of OM biological source may exceed the chemical structure in the formation of organo-mineral association. In addition, the proportion of bound microbial lipids was higher under drier conditions, whereas the proportion of bound plant-derived lipids was not affected by the water content. This contrast lies in the distinct formation pathways of mineral-bound microbial and plant lipids. Microbes tend to adhere to the mineral surfaces under drier conditions, accelerating the formation of organo-mineral associations, while plant organic matter is adsorbed on the mineral surfaces after initial decomposition. This deciphered a new aspect of microbial contribution to the stability of SOM. Consequently, microbial physiology, particularly hydrotaxis, should be regarded as another biogeochemical agent of SOM stabilization.
DOI: 10.6084/m9.figshare.7006946.v1
title: RSSCN7 Image dataset

description: https://sites.google.com/view/zhouwx/dataset<br>