cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3636689_d4
title: Additional file 10 of Drug combinatorics and side effect estimation on the signed human drug-target network

description: Drugbank_Overlap_drugpairs_with_DCDB. Text file containing all drug pairs overlapping with the experimental drug combination of the database DCDB. (TXT 8 kb)
DOI: 10.6084/m9.figshare.c.3636689_d6
title: Additional file 8 of Drug combinatorics and side effect estimation on the signed human drug-target network

description: Text file containing all drug pairs having side effect scores b i (j)=b j (i)=0. (TXT 44 kb)
DOI: 10.6084/m9.figshare.c.3636689_d5
title: Additional file 4 of Drug combinatorics and side effect estimation on the signed human drug-target network

description: Text file containing all drug pairs having synergistic scores a i (j)=a j (i)=0. (TXT 40 kb)
DOI: 10.6084/m9.figshare.c.3636689_d8
title: Additional file 9 of Drug combinatorics and side effect estimation on the signed human drug-target network

description: Text file containing all drug pairs having negative side effect scores b i (j)&lt;0 and b j (i)&lt;0. (TXT 113 kb)
DOI: 10.6084/m9.figshare.c.3636689_d9
title: Additional file 11 of Drug combinatorics and side effect estimation on the signed human drug-target network

description: Drug_Target_Signed_Network.mat. Matlab file containing the drug-target adjacency matrix. (TXT 28 kb)
DOI: 10.6084/m9.figshare.c.3636689_d10
title: Additional file 3 of Drug combinatorics and side effect estimation on the signed human drug-target network

description: Text file containing all drug pairs having synergistic scores a i (j)â Ľ0.5 but 0
DOI: 10.6084/m9.figshare.c.3636689_d11
title: Additional file 5 of Drug combinatorics and side effect estimation on the signed human drug-target network

description: Text file containing all drug pairs having negative synergistic scores a i (j)&lt;0 and a j (i)&lt;0. (TXT 1082 kb)
DOI: 10.6084/m9.figshare.c.3636848_d2
title: MOESM1 of Repositioning of bromocriptine for treatment of acute myeloid leukemia

description: Additional file 1: Table S1. Upregulated probe set upon AML differentiation.
DOI: 10.6084/m9.figshare.c.3636848_d3
title: MOESM2 of Repositioning of bromocriptine for treatment of acute myeloid leukemia

description: Additional file 2: Table S2. Downregulated probe set upon AML differentiation.
DOI: 10.6084/m9.figshare.c.3637112_d1
title: MOESM2 of The core populations and co-occurrence patterns of prokaryotic communities in household biogas digesters

description: Additional file 2: Table S1. Prokaryotic diversity indices based on 97 % identity of 16S rRNA gene sequences and 2230 reads per sample. Table S2. The relative contributions (R square value) of each environmental factor to OTUs in all samples, Cluster I and II based on RDA analysis. Table S3. Relative abundances of core genera/OTUs in all 43 samples and sub-core genera/OTUs in Cluster I and II, and their correlation to environmental factors. Table S4. Relative abundances of the abundant phyla (average relative abundance &gt;0.1%) and genera (average relative abundance &gt;0.05 %). Table S5. Pearson’s correlation of abundant phyla and genera to environmental factors in Cluster I and II. Table S6. Pearson’s correlation of abundant methanogens to environmental factors in all samples. Table S7. Topological properties of co-occurring networks AS (43 samples), C1 (27 samples in Cluster I), and C2 (16 samples in Cluster II), generated with Gephi software. Table S8. Node information of 103 cosmopolitan OTUs in the network C1 (Cluster I). Table S9. Positive and negative interactions among modules in network AS, C1, and C2. Table S10. Node information of 206 cosmopolitan OTUs in the network C2 (Cluster II). Table S11. Node information of 110 cosmopolitan OTUs in the network AS (all samples). Table S12. Fermentation conditions and chemical properties in biogas digesters.
DOI: 10.6084/m9.figshare.c.3637193_d6
title: Additional file 3: Table S2. of Genome-wide survey of two-component signal transduction systems in the plant growth-promoting bacterium Azospirillum

description: Domain architecture, genetic organization and subcellular localization of A. lipoferum 4B TCS components. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3637202_d1
title: Additional file 1: of Detection of Trichomonas vaginalis in prostate tissue and serostatus in patients with asymptomatic benign prostatic hyperplasia

description: Raw data and statistical analysis. All data generated or analyzed during this study on each individual benign prostate hyperplasia (BPH) and control case is presented. The data includes information on the following: -Levels of IgG subtypes (OD values), -T vaginalis-PCR positive and negative cases (OD values), -All statistical data analyzed during this study on IgG subtypes among BPH and control subjects. (XLSX 39Â kb)
DOI: 10.6084/m9.figshare.c.3637238_d3
title: Additional file 5: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

description: Changes in gene expression between EO and SM for C. tshokwe transcriptome. Results of the edgeR DE-analysis. The table reports the fold-change in the expression levels and relative uncorrected and corrected p-values between EO and SM for all genes in the C. tshokwe transcriptome. (TXT 7336Â kb)
DOI: 10.6084/m9.figshare.c.3637238_d6
title: Additional file 3: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

description: Blast results of C. tshokwe transcriptome assembly. Tabular blast report showing the results of the blastx comparison between the transcriptome of C. tshokwe and the proteome of D. rerio. (TXT 19887Â kb)
DOI: 10.6084/m9.figshare.c.3637238_d9
title: Additional file 2: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

description: Blast results of C. compressirostris transcriptome assembly. Tabular blast report showing the results of the blastx comparison between the transcriptome of C. compressirostris and the proteome of D. rerio. (TXT 14648Â kb)
DOI: 10.6084/m9.figshare.c.3637238_d7
title: Additional file 4: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

description: Changes in gene expression between EO and SM for C. compressirostris transcriptome. Results of the edgeR DE-analysis. The table reports the fold-change in the expression levels and relative uncorrected and corrected p-values between EO and SM for all genes in the C. compressirostris transcriptome. (TXT 5878Â kb)
DOI: 10.6084/m9.figshare.c.3637307_d7
title: Additional file 2: of Metabolic signatures differentiate ovarian from colon cancer cell lines

description: Supplemental Table 1. Metabolites present in all examined cell lines. Star (*) indicates compounds that have not been officially â  plexedâ   (based on a standard), although we are confident in their identity.
DOI: 10.6084/m9.figshare.c.3637325_d1
title: Additional file 12. of Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition

description: Chloroplast sequence variant data for Oryza species and cultivars in vcf format. (VCF 17719 kb)
DOI: 10.6084/m9.figshare.c.3637325_d2
title: Additional file 1: Table S1. of Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition

description: Sequencing data used for chloroplast sequence based phylogenies. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.c.3637325_d4
title: Additional file 11. of Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition

description: Sample metadata table corresponding to OTU table in Additional file 10. (TXT 43 kb)
DOI: 10.6084/m9.figshare.c.3637325_d5
title: Additional file 9: Table S8. of Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition

description: Differential representation (over or underrepresentation) in rhizosphere of early-diverged Oryza species. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3637325_d6
title: Additional file 6: Table S5. of Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition

description: Detection of phylogenetic signal in root-associated microbial communities â   Â Mantel tests to assess the correlation between bacterial community distance measures and the plant host species identity. (XLSX 66 kb)
DOI: 10.6084/m9.figshare.c.3637325_d7
title: Additional file 2: Table S2. of Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition

description: Kruskal-Wallis test of differently represented bacterial classes in different sample types. (XLSX 87 kb)
DOI: 10.6084/m9.figshare.c.3637325_d8
title: Additional file 7: Table S6. of Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition

description: Differentially represented taxa in cultivated vs wild rhizosphere. (XLSX 78 kb)
DOI: 10.6084/m9.figshare.c.3637325_d10
title: Additional file 10. of Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition

description: OTU table for 16S rDNA sequencing data in biom format. (BIOM 44979 kb)
DOI: 10.6084/m9.figshare.c.3637325_d12
title: Additional file 8: Table S7. of Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition

description: Differential representation of Taxa in AA genome cultivated vs wild rhizosphere. (XLSX 66.0 kb)
DOI: 10.6084/m9.figshare.c.3637445_d6
title: Additional file 8: Figure S3â  S6. of Positionally-conserved but sequence-diverged: identification of long non-coding RNAs in the Brassicaceae and Cleomaceae

description: Analyses of collinearity and positional conservation of sequentially diversified Aethionemeae LncRNAs. (A) Screenshot from GeVo. GeVo calculates the collinearity of a query sequence with the genome of a subject organism. The query here is the nearest protein coding gene of Ae. arabicum shown in B, the subjects are Ae. arabicum and A. thaliana. The position of the positionally conserved LncRNA is shown with a pink box, while the protein coding genes of A. thaliana and Ae. arabicum are shown with blue boxes. (B) Screenshot from the PLncDB website, shown are the Arabidopsis thaliana LncRNA (pink) and its nearest protein coding gene (blue). (C) Screenshot from the CoGe Blast HSP. Pink is the Aethionema arabicum transcript along the Ae. arabicum genome. Blue is the nearest Ae. arabicum protein coding gene. Figure S7â  S9. Analyses of collinearity and positional conservation of sequentially diversified Cleomaceae LncRNAs. (A) Screenshot from GeVo. GeVo calculates the collinearity of a query sequence with the genome of a subject organism. The query here is the nearest protein coding gene of Taranaya hassleriana, the subjects are T. hassleriana and A. thaliana. The position of the positionally conserved LncRNA is shown with a pink box, while the protein coding genes of A. thaliana and T. hassleriana are shown with blue boxes. (B) Screenshot from the PLncDB website, shown are the Arabidopsis thaliana LncRNA (pink) and its nearest protein coding gene (blue). (ZIP 716 kb)
DOI: 10.6084/m9.figshare.c.3637457_d2
title: Additional file 3: of Early BCG vaccine to low-birth-weight infants and the effects on growth in the first year of life: a randomised controlled trial

description: The effect of early BCG on anthropometric measurements at 6 and 12 months stratified by weight at inclusion, overall and by sex. Description of the data: A table showing the effect of early BCG on anthropometric measurements at 6 and 12 months after inclusions stratified by weight at inclusion (2.00–2.49; 1.50–1.99; &lt;1.50) and sex. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3637457_d1
title: Additional file 1: of Early BCG vaccine to low-birth-weight infants and the effects on growth in the first year of life: a randomised controlled trial

description: Baseline differences among children measured for growth at 2, 6 and 12 months. Description of the data: A table showing the baseline difference in the randomisation groups among the children measured for growth at 2, 6 and 12 months after inclusion. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3637457_d3
title: Additional file 2: of Early BCG vaccine to low-birth-weight infants and the effects on growth in the first year of life: a randomised controlled trial

description: Baseline differences in children measured for growth and children never measured for growth. Description of data: A table comparing baseline differences for children measured for growth and children never measured for growth. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.c.3637463_d1
title: Additional file 1: of Prognostic value of anti-CRP antibodies in lupus nephritis in long-term follow-up

description: is a table presenting baseline characteristics and laboratory data of patients with newly diagnosed LN. Data presented as median (5th and 95th percentiles) or number (%), differences compared using the Mannâ  Whitney test unless otherwise stated. *Fisher Exact test. **Expressed as number (%) of patients with erytrocyturia above normal range. ***Ď 2, GFR expressed as clearance of creatinine. Anti-CRP-Ab anti-C-reactive protein antibodies, anti-C1q-Ab anti-C1q antibodies, GFR glomerular filtration rate, hsCRP high-sensitivity C-reactive protein, NS not significant, SLEDAI Systemic Lupus Erythematosus Disease Activity Index. (XLS 17 kb)
DOI: 10.6084/m9.figshare.c.3637481_d1
title: Additional file 1: of The Adolescent Girls Initiative-Kenya (AGI-K): study protocol

description: AGI-K baseline survey. (XLSX 2079Â kb)
DOI: 10.6084/m9.figshare.c.3637484_d3
title: MOESM5 of Effect of helium pre- or postconditioning on signal transduction kinases in patients undergoing coronary artery bypass graft surgery

description: Additional file 5. Raw data of the troponin levels.
DOI: 10.6084/m9.figshare.c.3637484_d4
title: MOESM4 of Effect of helium pre- or postconditioning on signal transduction kinases in patients undergoing coronary artery bypass graft surgery

description: Additional file 4. Raw data of the western blots.
DOI: 10.15468/dl.5t8quy
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Etelis carbunculus Cuvier, 1828",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is United States of America",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2020"
 ]
}

 The dataset includes 42 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033960-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jdj4sv
title: Occurrence Download

description: A dataset containing 325734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is one of (Cucurbitaceae, Oziroe Raf.)"
 ]
}

 The dataset includes 325734 records from 1125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033956-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dym0tl
title: Occurrence Download

description: A dataset containing 385 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-117.00439 10.63477,-84.04541 11.11816,-84.48486 33.66211,-117.04834 33.79395,-117.00439 10.63477))",
 "TaxonKey is Paraphidippus F.O.Pickard-Cambridge, 1901"
 ]
}

 The dataset includes 385 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029027-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h3kjev
title: Occurrence Download

description: A dataset containing 1823 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bradypus variegatus Schinz, 1825",
 "Year 1967-2021"
 ]
}

 The dataset includes 1823 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161568-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc28nyws
title: CCDC 2105516: Experimental Crystal Structure Determination

description: Related Article: Imen Tlili,  Hamza Triki,  Mohammed S. M. Abdelbaky,  Abderrazek Oueslati,  George Mousdis,  Santiago García-Granda,  Slaheddine Chaabouni|2024|J.Cluster Sci.|35|1233|doi:10.1007/s10876-024-02545-9
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.5zrevn
title: Occurrence Download

description: A dataset containing 574 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Petunia axillaris (Lam.) Britton, Sterns & Poggenb.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 574 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029028-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2byktp
title: CCDC 2173373: Experimental Crystal Structure Determination

description: Related Article: Reese A. Clendening, Matthias Zeller, Tong Ren|2022|Inorg.Chem.|61|13442|doi:10.1021/acs.inorgchem.2c01743
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.zr85uz
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erigeron aureus Greene",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 85 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161582-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2dnlf3
title: CCDC 2224325: Experimental Crystal Structure Determination

description: Related Article: Wen-Kang Wang, Fei-Yun Bao, Zhi-Wei Shang, Jian Zheng, Sheng-Yin Zhao|2024|Org.Lett.|26|4297|doi:10.1021/acs.orglett.4c01164
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.xyo7fw
title: Occurrence Download

description: A dataset containing 751 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trachemys venusta (Gray, 1855)"
 ]
}

 The dataset includes 751 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029036-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r3sj4f
title: Occurrence Download

description: A dataset containing 766 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gallotia stehlini (Schenkel, 1901)"
 ]
}

 The dataset includes 766 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031945-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xfkbns
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scutellaria baicalensis",
 "Country is Korea (Democratic People’s Republic of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004831-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kv2bfd
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Oryctolagus cuniculus cuniculus"
 ]
}

 The dataset includes 130 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026386-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112025612
title: Cuneiform Tablet 1913.14.1513, Spurlock 1913.14.1513

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1513; CDLI P421365 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/2) ❧ [Physical Object Note:] 4.9 x 3 x 1.7 cm (27 g)
DOI: 10.15468/dl.qbjcbx
title: Occurrence Download

description: A dataset containing 9291 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trichoptera",
 "Country is United States of America",
 "Geometry POLYGON((-108.984375 38.685509,-108.984375 24.766784,-87.978515 24.766784,-87.978515 38.685509,-108.984375 38.685509))"
 ]
}

 The dataset includes 9291 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063418-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cuty3m
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lessingianthus stoechas (Mart. ex Baker) H.Rob."
 ]
}

 The dataset includes 77 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011245-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.