DOI: 10.5281/zenodo.14968905
title: MethylGPT training data (CSV+Parquet) [2025-03] Part2

description: MethylGPT: a foundation model for the DNA methylome

Kejun Ying, Jinyeop Song, Haotian Cui, Yikun Zhang, Siyuan Li, Xingyu Chen, Hanna Liu, Alec Eames, Daniel L McCartney, Riccardo E. Marioni, Jesse R. Poganik, Mahdi Moqri, Bo Wang, Vadim N. Gladyshev

doi: https://doi.org/10.1101/2024.10.30.621013

The original paper only provided .parquet files, and this archive includes the converted csv files.

The conversion python script is included.

 

List of files in https://zenodo.org/uploads/14968494:





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block_csv_data_0afd628a35bbd78055e1a9381f32ff1e.csv

probe_ids_type3.csv

parquet.to.csv.py

List of files in https://zenodo.org/uploads/14968905:



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List of files in https://zenodo.org/uploads/14968908:

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List of files in https://zenodo.org/uploads/14968912:

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