cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/webster-c100-2517
title: Report of the National Advisory Commission, 1968

description: Report of the National Advisory Commission on civil disorders, excerpts from Kerner Commission, 1968. PART OF SERIES: Included in the series are reports that summarize independent investigations about both the LAPD and other instances of urban violence and civil unrest. The reports were produced by various commissions and advisory bodies on civil disorders.
DOI: 10.25549/webster-c100-5469
title: Office of the Special Advisor Arrests Database Analysis, 1992-04-29/1992-05-04

description: Office of the Special Advisor Arrests Database Analysis, a summary of arrests during the 1992 riots, attorney work product, 1992 April 29 - 1992 May 4. PART OF SERIES: The series is comprised of detailed analyses of incidents that occurred during the 1992 Los Angeles riots. Included are graphs, statistics, figures, and spreadsheets that summarize data involving police deployment, incident calls, structural fires, and arrests. Materials are presented through charts, graphs, tables, and a group of floppy disks.
DOI: 10.25549/webster-c100-762
title: Los Angeles / Central City North, 1989-04-01

description: Neighborhood community plan developed by the city of Los Angeles for the Central City North area, 1989 April. PART OF A SERIES: This series consists of community plans developed for several neighborhoods within the city of Los Angeles. Items are arranged alphabetically according to location name.
DOI: 10.25549/webster-c100-2531
title: Report of the National Advisory Commission, 1968

description: Report of the National Advisory Commission on civil disorders, excerpts from Kerner Commission, 1968. PART OF SERIES: Included in the series are reports that summarize independent investigations about both the LAPD and other instances of urban violence and civil unrest. The reports were produced by various commissions and advisory bodies on civil disorders.
DOI: 10.25549/webster-c100-5543
title: Office of the Special Advisor Arrests Database Analysis, 1992-04-29/1992-05-04

description: Office of the Special Advisor Arrests Database Analysis, a summary of arrests during the 1992 riots, attorney work product, 1992 April 29 - 1992 May 4. PART OF SERIES: The series is comprised of detailed analyses of incidents that occurred during the 1992 Los Angeles riots. Included are graphs, statistics, figures, and spreadsheets that summarize data involving police deployment, incident calls, structural fires, and arrests. Materials are presented through charts, graphs, tables, and a group of floppy disks.
DOI: 10.25549/webster-c100-5589
title: Office of the Special Advisor Arrests Database Analysis, 1992-04-29/1992-05-04

description: Office of the Special Advisor Arrests Database Analysis, a summary of arrests during the 1992 riots, attorney work product, 1992 April 29 - 1992 May 4. PART OF SERIES: The series is comprised of detailed analyses of incidents that occurred during the 1992 Los Angeles riots. Included are graphs, statistics, figures, and spreadsheets that summarize data involving police deployment, incident calls, structural fires, and arrests. Materials are presented through charts, graphs, tables, and a group of floppy disks.
DOI: 10.25549/webster-c100-5575
title: Office of the Special Advisor Arrests Database Analysis, 1992-04-29/1992-05-04

description: Office of the Special Advisor Arrests Database Analysis, a summary of arrests during the 1992 riots, attorney work product, 1992 April 29 - 1992 May 4. PART OF SERIES: The series is comprised of detailed analyses of incidents that occurred during the 1992 Los Angeles riots. Included are graphs, statistics, figures, and spreadsheets that summarize data involving police deployment, incident calls, structural fires, and arrests. Materials are presented through charts, graphs, tables, and a group of floppy disks.
DOI: 10.25549/webster-c100-6032
title: Violence in the City -- An End or a Beginning?, 1965-12-02

description: "Violence in the City -- An End of a Beginning?" Report by the Governor's Commission on the Los Angeles Riots looking at the circumstances surrounding the Watts riots of 1965, and how the riots could have possibly been prevented, 1965 December 2. PART OF SERIES: Included in the series are reports that summarize independent investigations about both the LAPD and other instances of urban violence and civil unrest. The reports were produced by various commissions and advisory bodies on civil disorders.
DOI: 10.5281/zenodo.8173286
title: The Genome Resolved Open Watersheds database (GROWdb): A functional microbiome catalog crowdsourced from North American rivers

description: This repository contains data for version 1 of the Genome Resolved Open Watersheds database (GROWdb), along with data for the manuscript describing GROWdb: 

"A functional microbiome catalog crowdsourced from North American rivers"

Mikayla A. Borton, Bridget B. McGivern, Kathryn R. Willi, Ben J. Woodcroft, Annika C. Mosier, Ted Bambakidis, Derick M. Singleton, Filipe Liu, Janaka N. Edirisinghe, José P. Faria, Rebecca A. Daly, Amy E. Goldman, Michael J. Wilkins, Ed K. Hall, Christa Pennacchio, Simon Roux, Emiley A. Eloe-Fadrosh, Matthew B. Sullivan, Christopher S. Henry, Elisha M. Wood-Charlson, Matthew R.V. Ross, Christopher S. Miller, Byron C. Crump, James C. Stegen, Kelly C. Wrighton

Annotation datasets



annotations.tsv.zip: raw DRAM annotations of 2,093 unique MAGs in GROWdb

metabolism_summary.xlsx: DRAM distillate summary of genome annotations 

genes.fna.zip: nucleotide sequences of genes in 2,093 unique MAGs in GROWdb, with gene identifiers corresponding to those in annotations.tsv.zip


Antibiotic resistance genes (ARGs) dataset



ARGS_genes_rgi.txt: Output of Resistance Gene Identifier containing list of predicted ARGs

AMR_expression_by_sample.csv: metatranscriptomic expression of identified ARGs by category


Expression (Metatranscriptome) Data Tables



GENES_geTMM_norm.counts.rpk_edger_zenodo.csv: geTMM values per gene filtered to genes in at least 10% of samples

BINS_norm.counts.rpk_edger.mean_atLeast20_zenodo.csv: mean geTMM values per genome filtered to genes in at least 10% of samples and to bins with at least 20 genes expressed


Phylogenetic Tree Files



GROW_nxr/nar_tree.pdf: pdf format of phylogenetic tree of nxr and nar

GROW_pmoA_amoA_tree.pdf: pdf format of phylogenetic tree of pmoA and amoA

bipartitionsBranchLabels.nxr-nar_seqs_for_tree_aligned.faa_mode_low.renamed: newick format of phylogenetic tree of nxr and nar

bipartitionsBranchLabels.amoA_pmoA_seqs_for_tree_aligned.faa_mode_low.renamed: newick format of phylogenetic tree of pmoA and amoA


GROWdb Global MAG files





5986_99ID_drep_global.tar.gz: zipped file of dereplicated MAG files (n=5,986) from global freshwater analysis of 9,798 MAGs


GlobalMAG_Inventory.xlsx: Inventory of 9,798 MAGs used in global analysis
DOI: 10.21336/gen.0x48-sm13
title: NDACC ozone LIDAR data data sets from NIWA Lauder atmospheric research station available at the NDACC and EVDC Data Handling Facilities

description: The RIVM stratospheric lidar is a differential absorption lidar (DIAL). Since September 2007, it has a Coherent LPXPro 325C XeCl excimer laser, predominantly emitting light pulses in the wavelength 308 nm. A secondary beam (at 353 nm) is generated through Raman conversion in a Hydrogen cell. Subsequently, the system measures the backscatter in these two wavelengths (both measured in near [5% intensity] and far [95% intensity] channels) and at 332 and 385 nm (Raman channels).
DOI: 10.1594/pangaea.942856
title: Terrestrial, UAV-borne, and airborne laser scanning point clouds of central European forest plots, Germany, with extracted individual trees and manual forest inventory measurements

description: Laser scanning point clouds of forest stands were acquired in southwest Germany in 2019 and 2020 from different platforms: an aircraft, an uncrewed aerial vehicle (UAV) and a ground-based tripod. The UAV-borne and airborne laser scanning campaigns cover twelve forest plots of approximately 1 ha. The plots are located in mixed central European forests close to Bretten and Karlsruhe, in the federal state of Baden-Württemberg, Germany. Terrestrial laser scanning was performed in selected locations within the twelve forest plots. Airborne and terrestrial laser scanning point clouds were acquired under leaf-on conditions, UAV-borne laser scans were acquired both under leaf-on and later under leaf-off conditions. In addition to the laser scanning campaigns, forest inventory tree properties (species, height, diameter at breast height, crown base height, crown diameter) were measured in-situ during summer 2019 in six of the twelve 1-ha plots. Single tree point clouds were extracted from the different laser scanning datasets and matched to the field measurements. For each tree entry, point clouds, tree species, position, and field-measured and point cloud-derived tree metrics are provided. For 249 trees, point clouds from all three platforms are available. The tree models form the basis of a single tree database covering a range of species typical for central European forests which is currently being established in the framework of the SYSSIFOSS project.
description: Version 2, 2022-03-31: Previous version doi:10.1594/PANGAEA.933426 contains errors due to data processing.
DOI: 10.17026/dans-xfe-rn2w
title: Sustainable Software Sustainability - Workshop report

description: Report of the Sustainable Software Sustainability Workshop by DANS and SSI (The Software Sustainability Institute in the UK) held in The Hague, March 7-9 2017. Topics covered: 1) FAIR application to software, 2) Software Seal of Approval, 3) Co-operation academic sector with the public sector 4) Software Sustainability Infrastructure
DOI: 10.17909/znf5-d889
title: Data used for Le Bourdais 2024
DOI: 10.18112/openneuro.ds004469.v1.1.3
title: Temporal Lobe Epilepsy - UNAM
DOI: 10.21227/k0w8-qz67
title: Video Streaming and Cloud Gaming services over 4G and 5G: a complete network and service metrics dataset

description: This work presents a dataset based on multiple metrics namely KQIs, which provide the E2E conditions of different services. Particularly, the dataset considers video streaming and cloud gaming (CG) services.
DOI: 10.21227/y3v9-b041
title: Autism Brain Imaging Data Exchange (ABIDE)

description: Autism spectrum disorder (ASD) is characterized by qualitative impairment in social reciprocity, and by repetitive, restricted, and stereotyped behaviors/interests. Previously considered rare, ASD is now recognized to occur in more than 1% of children. Despite continuing research advances, their pace and clinical impact have not kept up with the urgency to identify ways of determining the diagnosis at earlier ages, selecting optimal treatments, and predicting outcomes. For the most part this is due to the complexity and heterogeneity of ASD. To face these challenges, large-scale samples are essential, but single laboratories cannot obtain sufficiently large datasets to reveal the brain mechanisms underlying ASD. In response, the Autism Brain Imaging Data Exchange (ABIDE) initiative has aggregated functional and structural brain imaging data collected from laboratories around the world to accelerate our understanding of the neural bases of autism. With the ultimate goal of facilitating discovery science and comparisons across samples, the ABIDE initiative now includes two large-scale collections: ABIDE I and ABIDE II. Each collection was created through the aggregation of datasets independently collected across more than 24 international brain imaging laboratories and are being made available to investigators throughout the world, consistent with open science principles, such as those at the core of the International Neuroimaging Data-sharing Initiative. For details about these initiatives visit the collection specific pages: ABIDE I and ABIDE II.
DOI: 10.25549/webster-c100-2580
title: Report of the National Advisory Commission, 1968

description: Report of the National Advisory Commission on civil disorders, excerpts from Kerner Commission, 1968. PART OF SERIES: Included in the series are reports that summarize independent investigations about both the LAPD and other instances of urban violence and civil unrest. The reports were produced by various commissions and advisory bodies on civil disorders.
DOI: 10.5281/zenodo.11150993
title: PAIReD Jet Tagging Dataset

description: Training and testing dataset used in "PAIReD jet: A multi-pronged resonance tagging strategy across all Lorentz boosts" (arXiv:2311.11011).

This dataset corresponds to approximately 2% of the dataset used in the article. Five types of jets are simulated: AK4, AK8, AK15, PAIReD, and PAIReDEllipse. Each tar file contains one type of jet. Jets are split into train and test datasets. Three processes, namely ZHbb, ZHcc, and Z+jj are included. The Higgs mass in the training dataset is varied between 10-500 GeV, while the test dataset contains jets arising from a 125 GeV Higgs.
DOI: 10.5281/zenodo.12575399
title: Datasets used for the paper "Enhanced Blocking Frequencies in Very-high Resolution Idealized Climate Model Simulations"

description: Atmospheric model and processed data for reproducing the results of "Enhanced Blocking Frequencies in Very-high Resolution Idealized Climate Model Simulations" currently submitted to Geophysical Research Letters.
DOI: 10.5281/zenodo.12702004
title: Multivariate Flash Drought Intensity Index Datasets

description: This repository contains the Flash Drought Intensity Index (FDII) datasets associated with the manuscript entitled “Multivariate Evaluation of Flash Drought Across the United States”. The FDII explicitly accounts for the two key components of a flash drought – the rapid rate of intensification and the subsequent drought severity.
DOI: 10.5281/zenodo.2603256
title: Top Quark Tagging Reference Dataset

description: A set of MC simulated training/testing events for the evaluation of top quark tagging architectures.

In total 1.2M training events, 400k validation events and 400k test events. Use “train” for training, “val” for validation during the training and “test” for final testing and reporting results.

<strong>Description</strong>


	
	14 TeV, hadronic tops for signal, qcd diets background, Delphes ATLAS detector card with Pythia8
	
	
	No MPI/pile-up included
	
	
	Clustering of  particle-flow entries (produced by Delphes E-flow) into anti-kT 0.8 jets in the pT range [550,650] GeV
	
	
	All top jets are matched to a parton-level top within ∆R = 0.8, and to all top decay partons within 0.8
	
	
	Jets are required to have |eta| &lt; 2
	
	
	The leading 200 jet constituent four-momenta are stored, with zero-padding for jets with fewer than 200
	
	
	Constituents are sorted by pT, with the highest pT one first
	
	
	The truth top four-momentum is stored as truth_px etc.
	
	
	A flag (1 for top, 0 for QCD) is kept for each jet. It is called is_signal_new
	
	
	The variable "ttv" (= test/train/validation) is kept for each jet. It indicates to which dataset the jet belongs. It is redundant as the different sets are already distributed as different files.
description: {"references": ["Butter, Anja; Kasieczka, Gregor; Plehn, Tilman and Russell, Michael (2017). Based on data from 10.21468/SciPostPhys.5.3.028 (1707.08966)", "Kasieczka, Gregor et al (2019). Dataset used for arXiv:1902.09914 (The Machine Learning Landscape of Top Taggers)"]}
DOI: 10.5281/zenodo.6619768
title: JetClass: A Large-Scale Dataset for Deep Learning in Jet Physics

description: JetClass is a new large-scale dataset to facilitate deep learning research in jet physics. It consists of 100M jets for training, 5M for validation and 20M for testing. The dataset contains 10 classes of jets, simulated with MadGraph + Pythia + Delphes. <br> <br> A detailed description of the JetClass dataset is presented in the paper Particle Transformer for Jet Tagging. An interface to use the dataset is provided in https://github.com/jet-universe/particle_transformer.
DOI: 10.5281/zenodo.13960486
title: Source code and experimental data of human brain tissue (visual cortex, corona radiata) for poro-viscoelastic parameter identification

description: Computer code and experimental data that we used for our inverse parameter identification of poro-viscoelastic material parameters for two different brain regions: visual cortex (gray matter) and corona radiata (white matter). The experimental data comprises large-strain cyclic loading and compression/tension relaxation. For details see the corresponding publication: "Model-driven exploration of poro-viscoelasticity in human brain tissue: Be careful with the parameters!".

Further explanation regarding the specimen preparation, experimental setup, as well as the assignment of regions and governing regions can be found in Hinrichsen, J., Reiter, N., Bräuer, L. et al. Inverse identification of region-specific hyperelastic material parameters for human brain tissue. Biomech Model Mechanobiol (2023). https://doi.org/10.1007/s10237-023-01739-w.

The file "nonlinear-poro-viscoelasticity.cc" contains our C++ Finite Element code based on the open source library deal.II. It is accompanied by an exemplary parameter file.

Funding: The support from the German Research Foundation (Deutsche Forschungsgemeinschaft, DFG) through the grants BU 3728/1-1, BU 3728/3-1, STE 544/70-1 as well as through project number 460333672 CRC1540 Exploring Brain Mechanics is gratefully acknowledged.
DOI: 10.5281/zenodo.7294848
title: Software repository for data-driven reconstruction of doping profiles in semiconductors

description: Datasets and code used described in paper: "Data-driven solutions of ill-posed inverse problems arising from doping reconstruction in semiconductors" [arXiv:2208.00742]
DOI: 10.6084/m9.figshare.27291465
title: Supplementary Material for: “Should I let them know I have this?”: Multifaceted genetic discrimination and limited awareness of legal protections amongst individuals with hereditary cancer syndromes

description: Introduction: Hereditary cancer syndromes (HCS), such as Hereditary Breast and Ovarian Cancer Syndrome (HBOC) and Lynch Syndrome (LS), represent approximately 10% of all cancers. Along with medical burdens associated with the genetic risk of developing cancer, many individuals face stigma and discrimination. Genetic discrimination refers to negative treatment, unfair profiling or harm based on genetic characteristics, manifesting as “felt” stigma (ostracization without discriminatory acts) or “enacted” stigma (experiencing discriminatory acts). This study aimed to describe concerns and experiences of genetic discrimination faced by individuals with HCS. 
Methods: Semi-structured qualitative interviews were conducted with individuals with molecularly-confirmed HCS residing in Ontario, British Columbia and Newfoundland & Labrador, Canada. Purposive sampling was applied to obtain a diverse sample across demographic characteristics. Study procedures were informed by interpretive description; data were thematically analyzed using constant comparison.
Results: 73 participants were interviewed (39 HBOC, 34 LS; 51 females, 21 males, 1 gender-diverse; aged 25-80). Participants described multifaceted forms of genetic discrimination across healthcare, insurance, employment, and family/social settings. Participants valued the Genetic Non-Discrimination Act’s protective intent, but demonstrated limited knowledge of its existence and provisions. Limited knowledge, coupled with policy constraints in non-legislatable settings and third-party use of proxy genetic information, hindered participants’ ability to whistleblow or seek recourse. 
Conclusion: Our results illuminate a disconnect between intended protective effects of genetic non-discrimination legislation and ongoing genetic discrimination faced by individuals with hereditary conditions. To better support these individuals, this study encourages public outreach and knowledge translation efforts to increase awareness of non-discrimination legal protections.
DOI: 10.25549/webster-c100-5715
title: Office of the Special Advisor Arrests Database Analysis, 1992-04-29/1992-05-04

description: Office of the Special Advisor Arrests Database Analysis, a summary of arrests during the 1992 riots, attorney work product, 1992 April 29 - 1992 May 4. PART OF SERIES: The series is comprised of detailed analyses of incidents that occurred during the 1992 Los Angeles riots. Included are graphs, statistics, figures, and spreadsheets that summarize data involving police deployment, incident calls, structural fires, and arrests. Materials are presented through charts, graphs, tables, and a group of floppy disks.
DOI: 10.25549/webster-c100-5671
title: Office of the Special Advisor Arrests Database Analysis, 1992-04-29/1992-05-04

description: Office of the Special Advisor Arrests Database Analysis, a summary of arrests during the 1992 riots, attorney work product, 1992 April 29 - 1992 May 4. PART OF SERIES: The series is comprised of detailed analyses of incidents that occurred during the 1992 Los Angeles riots. Included are graphs, statistics, figures, and spreadsheets that summarize data involving police deployment, incident calls, structural fires, and arrests. Materials are presented through charts, graphs, tables, and a group of floppy disks.
DOI: 10.25549/webster-c100-4713
title: Report of the National Advisory Commission, 1968

description: Report of the National Advisory Commission on civil disorders, 1968. PART OF SERIES: Included in the series are reports that summarize independent investigations about both the LAPD and other instances of urban violence and civil unrest. The reports were produced by various commissions and advisory bodies on civil disorders.
DOI: 10.25549/webster-c100-5548
title: Office of the Special Advisor Arrests Database Analysis, 1992-04-29/1992-05-04

description: Office of the Special Advisor Arrests Database Analysis, a summary of arrests during the 1992 riots, attorney work product, 1992 April 29 - 1992 May 4. PART OF SERIES: The series is comprised of detailed analyses of incidents that occurred during the 1992 Los Angeles riots. Included are graphs, statistics, figures, and spreadsheets that summarize data involving police deployment, incident calls, structural fires, and arrests. Materials are presented through charts, graphs, tables, and a group of floppy disks.
DOI: 10.1285/i22390359v53p101
title: "We're sorry for any inconvenience caused": Pragmatic aspects of handling complaints in customer-airline company tweets

description: In the relationship between customers and companies, the Web has radically changed the communicative context in which they daily interact, as computer-based technology includes many possibilities to express opinions and to exchange information freely. Therefore, customers have become familiar with leaving feedback through dedicated reviews sites, especially through social media, generating a powerful word of mouth. While complaints are now exposed to a wider audience because thousands of other potential customers can read all the interactions, airline companies have more opportunities to listen to travellers and engage with them. The digital revolution has thus had a profound influence on complaint management, which is becoming a priority in order to win back the complaint and shape the reputation of the company. The present paper offers a discourse-pragmatic analysis of complaints negotiation tweets written by native/non-native travellers and four European airlines companies (British Airways, Lufthansa, Ryanair and EasyJet) in summer 2021. The analysis aims at examining the use of directness/indirectness, politeness strategies and upgraders/downgraders in customer-airline company online interactions. Preliminary findings demonstrate that, depending on the different discursive strategies adopted by customers (from neutral to more confrontational formulations), airline companies apologies tend to mitigate conflicts showing empathy and promoting a traveller-oriented approach.