cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/myvs-cf60
title: Atlantic Lake diatom surface sample dataset

description: Raw data for the Atlantic Lake diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/c8vj-h622
title: Laguna Colorada water chemistry dataset

description: Raw data for the Laguna Colorada water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.28598213
title: Raw data

description: The goal was to assess the effectiveness of N-acetyl cysteine (NAC) in protecting the liver from phenytoin-induced hepatotoxicity in rats
DOI: 10.21233/rz8n-fx37
title: Sibaya pollen dataset

description: Raw data for the Sibaya pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.74fvhp
title: Occurrence Download

description: A dataset containing 59368 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ginkgo biloba L."
 ]
}

 The dataset includes 59368 records from 677 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024567-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/b8r-ral-0zj
title: Omphiscola glabra (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qr8-krn-hvf
title: Lauria J. E. Gray, 1840

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y4k-2qp-btd
title: Perforatella incarnata (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zl4-acd-b20
title: Clausilia dubia floningiana Westerlund, 1890

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/782-lpn-6d7
title: Littorina compressa Jeffreys, 1865

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h3z-cka-c8w
title: Cerithiopsis tubercularis (Montagu, 1803)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hyb-k3s-336
title: Ena montana (Draparnaud, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7ae-xfg-fpf
title: Conus caracteristicus Fischer von Waldheim, 1807

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lxn-4gy-dqr
title: Zebina villenai Rolán & Luque, 2000

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qgl-7jt-jzw
title: Mieniplotia scabra (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/aq3-azb-0ve
title: Monacha cartusiana (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nr8-337-x2v
title: Monacha parumcincta (Menke, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jn6-57f-71t
title: Gonyodiscus rotundatus (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0q3-fyc-b25
title: Monacha ignorata (O. Boettger, 1905)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zd1-8wc-yl5
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2e6-1b7-3y8
title: Helix Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qw2-a67-791
title: Xerocrassa cretica (L. Pfeiffer, 1841)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gmx-v9v-9lc
title: Charpentieria itala albopustulata (De Cristofori & Jan, 1832)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8p2-5bz-vb2
title: Ancylus fluviatilis O. F. Müller, 1774

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nj6-fpb-qq0
title: Mastus subaii Maassen, 1995

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5ks-tm1-ppt
title: Laciniaria plicata (Draparnaud, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zsn-z4h-5gz
title: Jujubinus striatus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j8w-p4v-llw
title: Anisus leucostoma (Millet, 1813)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cq4-cw6-rs6
title: Iglica seyadi Backhuys & Boeters, 1974

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ntd-nts-twp
title: Bostryx louisae Breure, 1978

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lqx-ky0-p58
title: Lindholmiola lens (A. Férussac, 1832)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qhl-4nn-rh8
title: Melanella Bowdich, 1822

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8f9-p8l-bt8
title: Xerolenta obvia obvia (Menke, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qh5-gew-s3f
title: Abida secale boileausiana (Küster, 1845)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pmr-vwb-jvk
title: Pyramidula cephalonica (Westerlund, 1898)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zgc-rjl-3k8
title: Chama Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hj4-sh8-rqp
title: Turbo argyrostomus argyrostomus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/we2-x6j-0mg
title: Xerolenta obvia (Menke, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kpe-sle-ekk
title: Cochlodina laminata (Montagu, 1803)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dty-l30-gsf
title: Helicostyla bicolorata (I. Lea, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zl5-q8v-5gv
title: Cochlodina costata ungulata (Rossmässler, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0qp-bsr-hae
title: Ena montana (Draparnaud, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3lt-6yz-5p0
title: Alvania cancellata (da Costa, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3pl-0bg-tzd
title: Merdigera obscura (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y10-51c-75j
title: Clausiliidae J. E. Gray, 1855

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2tk-fjd-mqk
title: Crucibulum lignarium (Broderip, 1834)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vkh-ym0-ryp
title: Rumina decollata (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/16k-00p-y17
title: Tritia incrassata (Strøm, 1768)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hse-gl7-1zc
title: Helix pomatia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c2k-ve3-1tk
title: Alvania rudis (R. A. Philippi, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yj8-954-6s1
title: Cochlostoma septemspirale (Razoumowsky, 1789)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/879-q6t-1vf
title: Cochlostoma Jan, 1830

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lmx-sam-xt0
title: Notocochlis gualteriana (Récluz, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/te4-k8p-fwe
title: Sigatica semisulcata (J. E. Gray, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6yn-fl4-sa1
title: Phenacovolva rosea (A. Adams, 1855)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/my7-ecf-00h
title: Tanychlamys amboinensis (E. von Martens, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/ekas87
title: Collezione di Rodentia del Museo di Storia naturale di Firenze | Rodentia collection of the Natural History Museum of Florence

description: The whole set of non-alcohol preserved specimens of Rodentia kept in the Natural History Museum of Florence.
DOI: 10.3535/84a-fj7-ygd
title: Pholas dactylus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8fx-p23-tp3
title: Farcimen mani (Poey, 1851)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lwt-wgb-3wy
title: Monoplex krebsii (Mörch, 1877)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/21t-cet-vzt
title: Fruticicola fruticum (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e37-s6e-r4k
title: Ancylus fluviatilis O. F. Müller, 1774

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hrl-ppn-qkz
title: Gyroscala coronata (Lamarck, 1816)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rqk-8rj-ay1
title: Phenacolimax major (A. Férussac, 1807)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7l7-017-5ph
title: Anisus vortex (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0dw-vb1-f5l
title: Aegopinella pura (Alder, 1830)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pem-a5d-nvt
title: Oxychilus superfluus (L. Pfeiffer, 1849)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1bs-mzc-hxp
title: Succinella oblonga (Draparnaud, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1fe-f75-hhf
title: Platyla pinteri (Subai, 1976)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/52b-zb0-l42
title: Chondrina avenacea avenacea (Bruguière, 1792)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wwb-1g5-jfl
title: Chondrina avenacea lepta (Westerlund, 1887)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wez-9d9-8ev
title: Macrogastra plicatula plicatula (Draparnaud, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wt2-dgy-0t9
title: Vitreolina Monterosato, 1884

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dk8-11y-a8a
title: Dacrydium hyalinum (Monterosato, 1875)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fjq-tan-wjx
title: Cochlicopa lubrica (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5da-mwv-e8e
title: Metaxia metaxa (Delle Chiaje, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v9t-xkb-mkk
title: Cochlicella acuta (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0bb-j5w-5dm
title: Assiminea grayana J. Fleming, 1828

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/91e-t6f-dqw
title: Pomatias glaucus (G. B. Sowerby II, 1843)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mzk-z3h-lhp
title: Tritia corrugata (Brocchi, 1814)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qxg-nvj-p4j
title: Terebralia sulcata (Born, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z5q-9ek-1pz
title: Helix secernenda Rossmässler, 1847

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/03q-a4a-4em
title: Epitonium Röding, 1798

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5ky-hdb-7z7
title: Cochlicopa lubrica (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bk0-y4b-v0k
title: Arianta arbustorum arbustorum (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fbt-cpj-x5n
title: Clausilia bidentata bidentata (Strøm, 1765)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6mj-17f-rpv
title: Pomatias elegans (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8nr-3b1-sbb
title: Euomphalia strigella (Draparnaud, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w9k-n1x-r05
title: Pomatias elegans (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yk8-1pk-ttp
title: Planorbis carinatus O. F. Müller, 1774

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qac-e6r-8la
title: Chondrula microtragus (Rossmässler, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sq5-bjk-93p
title: Chondrina avenacea avenacea (Bruguière, 1792)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rzc-fzj-67k
title: Obscurella obscura (Draparnaud, 1805)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sjn-eaq-tsp
title: Oxychilus superfluus (L. Pfeiffer, 1849)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t0n-ryv-lx8
title: Schwartziella robusta Rolán & Luque, 2000

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5t4-9qf-zd7
title: Chondrina megacheilos avenoides (Westerlund, 1874)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j6v-xw9-gyp
title: Laona condensa (van der Linden, 1995)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q5t-ptr-bts
title: Monacha cartusiana (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rav-vqz-21c
title: Chilostoma cingulatum (S. Studer, 1820)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3h1-4rk-0mj
title: Perforatella incarnata (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4b5-flj-dka
title: Trochulus hispidus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rlc-58z-xgg
title: Leufroyia leufroyi (Michaud, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r27-9t8-aqf
title: Helicodonta obvoluta obvoluta (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ylt-7pg-rfh
title: Trochulus hispidus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jkc-404-5gl
title: Chondrula H. Beck, 1837

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8hl-bzt-hxp
title: Caucasotachea vindobonensis (C. Pfeiffer, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c1q-mwc-z0h
title: Theodoxus fluviatilis (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l2e-lez-3ja
title: Nassarius pullus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qq0-bpk-2sf
title: Schwartziella cancapae Rolán & Luque, 2000

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d81-6ah-bh0
title: Nerita scabricosta Lamarck, 1822

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6c3-q96-sbl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b8n-rxt-x2c
title: Heliacus implexus (Mighels, 1845)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mf9-8hr-841
title: Lithoglyphus naticoides (C. Pfeiffer, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zdb-06t-qr7
title: Scacchia maura van der Linden, 1996

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hj3-qrb-pq1
title: Albinaria teres extensa (L. Pfeiffer, 1865)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t7m-wpw-lh5
title: Faustina Kobelt, 1904

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6a1-36a-wp4
title: Perforatella incarnata (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/45l-57p-w2p
title: Schwartziella G. Nevill, 1881

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cmh-hkk-pqa
title: Semele bicolor (C. B. Adams, 1852)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mfd-hqg-94v
title: Pusia tricolor (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z8x-17e-rvw
title: Pomatias elegans (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/55j-lyr-qsz
title: Eobania vermiculata (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.16811926
title: Dataset and Code for "Biodegradable Mulching Enhances Soil Respiration via Phase-Specific Pathways"

description: This dataset contains all data, analysis scripts, and figure outputs supporting the manuscript:

Biodegradable Mulching Enhances Soil Respiration via Phase-Specific Pathways[Xiaowei Liu,   Mingdong Zhou, Wenqing He, Tao Yin *][Journal / DOI – to be updated upon publication]

The repository is organized into four independent modules, each with its own README, input data, analysis code, and results. Each module can be reproduced independently.

Repository structure:





1_data_imputation – Missing data imputation for the variable RDR using linear interpolation in R (zoo::na.approx). Outputs the imputed dataset used in later analyses.




2_origin_plots – OriginPro project files for generating violin plots and nonlinear fit plots. Includes processed input data and 12 high-resolution PDF figures.




3_mantel_analysis – R scripts and input data for Mantel test analysis of relationships between environmental factors and microbial/respiration variables. Outputs a multi-panel PDF plot (BM, PM, CT treatments). The final legend should be merged in Adobe Illustrator.




4_SEM_analysis – Structural Equation Modeling (SEM) analyses using both piecewiseSEM (frequentist) and brms (Bayesian) frameworks. Includes path coefficients, effect decomposition, R² summaries, model fit statistics (LOOIC, WAIC), and the final grouped bar figure.



Software requirements:





R (≥ 4.0.0) with packages: zoo, lme4, piecewiseSEM, brms, bayestestR, vegan, linkET, tidyverse, ggplot2, patchwork, RColorBrewer, Cairo, loo




OriginPro 2023 or later for .opju project files



Reproducibility:





Each module includes its own README with detailed instructions.




To reproduce the full workflow:





Run 1_data_imputation to generate data_imputation.csv.




Use data_imputation.csv in 4_SEM_analysis for SEM and effect decomposition.




Use 2_origin_plots and 3_mantel_analysis for figure generation.





License:The license for data and code is described in the LICENSE files in the project root or Zenodo record.
DOI: 10.3535/gvs-5z7-erw
title: Granaria frumentum illyrica (Rossmässler, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qcs-qvx-shj
title: Merdigera obscura (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zcv-esb-rbn
title: Emarginula octaviana Coen, 1939

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.