cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9919433.v1
title: comp_pg_bc_cfix.csv from The effect of network topology on optimal exploration strategies and the evolution of cooperation in a mobile population

description: We model a mobile population interacting over an underlying spatial structure using a Markov movement model. Interactions take the form of public goods games, and can feature an arbitrary group size. Individuals choose strategically to remain at their current location or to move to a neighbouring location, depending upon their exploration strategy and the current composition of their group. This builds upon previous work where the underlying structure was a complete graph (i.e. there was effectively no structure). Here, we consider alternative network structures and a wider variety of, mainly larger, populations. Previously, we had found when cooperation could evolve, depending upon the values of a range of population parameters. In our current work, we see that the complete graph considered before promotes stability, with populations of cooperators or defectors being relatively hard to replace. By contrast, the star graph promotes instability, and often neither type of population can resist replacement. We discuss potential reasons for this in terms of network topology.
DOI: 10.6084/m9.figshare.9919379.v1
title: DYNACROSS_190927.zip.002

description: Cleaned up docking Benchmark 5 starting structures (plus CAPRI target T131) and SwarmDock docking results, in PDB format, altogether with CAPRI assessment values (IRMSD, LRMSD, FNAT, FNONNAT, quality). Zip part 2.<br>Reference:M. Torchala, T. Gerguri, R.R.A. Chaleil, P. Gordon, F. Russell, M. Keshani, P.A. Bates, 'Enhanced sampling of protein conformational states for dynamic cross-docking within the protein-protein docking server SwarmDock', Proteins: Structure, Function, and Bioinformatics (2019).
DOI: 10.6084/m9.figshare.9919436.v1
title: compg50_fast.csv from The effect of network topology on optimal exploration strategies and the evolution of cooperation in a mobile population

description: We model a mobile population interacting over an underlying spatial structure using a Markov movement model. Interactions take the form of public goods games, and can feature an arbitrary group size. Individuals choose strategically to remain at their current location or to move to a neighbouring location, depending upon their exploration strategy and the current composition of their group. This builds upon previous work where the underlying structure was a complete graph (i.e. there was effectively no structure). Here, we consider alternative network structures and a wider variety of, mainly larger, populations. Previously, we had found when cooperation could evolve, depending upon the values of a range of population parameters. In our current work, we see that the complete graph considered before promotes stability, with populations of cooperators or defectors being relatively hard to replace. By contrast, the star graph promotes instability, and often neither type of population can resist replacement. We discuss potential reasons for this in terms of network topology.
DOI: 10.6084/m9.figshare.9919373
title: MZ_0001_001_Tuckerella_fossilibus_20x_old

description: <b>Species:</b> <i>Tuckerella fossilibus</i> Khaustov, Sergeyenko & Perkovsky, 2014<b>Source:</b> Bitterfeld amber<b>Deposition:</b> GPIH 4325, ex. coll. Klug 2333<b>Author's catalog number:</b> MZ_XXXX_001_Tuckerella_fossilibus_XXx_XXX<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Plan Apochromat Lambda 20X + DIC<b>Light corrections:</b> Adobe Photoshop Lightroom
DOI: 10.6084/m9.figshare.9919376
title: Metadata record for: High-density EEG mobile brain/body imaging data recorded during a challenging auditory gait pacing task

description: This dataset contains key characteristics about the data described in the Data Descriptor High-density EEG mobile brain/body imaging data recorded during a challenging auditory gait pacing task. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.6084/m9.figshare.9919373.v1
title: MZ_0001_001_Tuckerella_fossilibus_20x

description: <b>Species:</b> <i>Tuckerella fossilibus</i> Khaustov, Sergeyenko & Perkovsky, 2014<b>Source:</b> Bitterfeld amber<b>Deposition:</b> GPIH 4325, ex. coll. Klug 2333<b>Author's catalog number:</b> MZ_XXXX_001_Tuckerella_fossilibus_XXx_XXX<b>Microscope:</b> Nikon Eclipse Ni-U<br><b>Camera:</b> Nikon DS-Ri2<b>Image aquisition software:</b> NIS-Elements D<b>Optics:</b> CFI Plan Apochromat Lambda 20X + DIC<b>Light corrections:</b> Adobe Photoshop Lightroom
DOI: 10.6084/m9.figshare.9919358
title: DYNACROSS_190927.zip.001

description: Cleaned up docking Benchmark 5 starting structures (plus CAPRI target T131) and SwarmDock docking results, in PDB format, altogether with CAPRI assessment values (IRMSD, LRMSD, FNAT, FNONNAT, quality). Zip part 1.<br>Reference:M. Torchala, T. Gerguri, R.R.A. Chaleil, P. Gordon, F. Russell, M. Keshani, P.A. Bates, 'Enhanced sampling of protein conformational states for dynamic cross-docking within the protein-protein docking server SwarmDock', Proteins: Structure, Function, and Bioinformatics (2019).
DOI: 10.6084/m9.figshare.9919358.v1
title: DYNACROSS_190927.zip.001

description: Cleaned up docking Benchmark 5 starting structures (plus CAPRI target T131) and SwarmDock docking results, in PDB format, altogether with CAPRI assessment values (IRMSD, LRMSD, FNAT, FNONNAT, quality). Zip part 1.<br>Reference:M. Torchala, T. Gerguri, R.R.A. Chaleil, P. Gordon, F. Russell, M. Keshani, P.A. Bates, 'Enhanced sampling of protein conformational states for dynamic cross-docking within the protein-protein docking server SwarmDock', Proteins: Structure, Function, and Bioinformatics (2019).
DOI: 10.6084/m9.figshare.9919376.v2
title: Metadata record for: High-density EEG mobile brain/body imaging data recorded during a challenging auditory gait pacing task

description: This dataset contains key characteristics about the data described in the Data Descriptor High-density EEG mobile brain/body imaging data recorded during a challenging auditory gait pacing task. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>
DOI: 10.6084/m9.figshare.9919376.v1
title: Metadata record for: High-density EEG mobile brain/body imaging data recorded during a challenging auditory gait pacing task

description: This dataset contains key characteristics about the data described in the Data Descriptor High-density EEG mobile brain/body imaging data recorded during a challenging auditory gait pacing task. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> <br>
DOI: 10.6084/m9.figshare.9919235
title: wor_turnover

description: To establish baseline data on T. brucei proteome turnover, a stable isotopelabelling with amino acids in cell culture (SILAC)-based mass spectrometry analysis wasperformed to reveal the synthesis and degradation profiles for thousands of proteins in thebloodstream and procyclic forms of this parasite.
DOI: 10.6084/m9.figshare.9919136
title: Lohse_Waichman_IGG_ReplicationPackage

description: IGG Dataset for Replication Purposes
DOI: 10.6084/m9.figshare.9919145
title: BOriS DB v1

description: BOriS DB is a database of <i>oriC</i> sequences gathered using BOriS. Currently, it contains around 26.000 sequences that were identified from Gammaproteobacteria using γBOriS, which makes it the largest dataset of <i>oriC</i> sequences publicly available for both Gammaproteobacteria and Bacteria in general. BOriS DB, which will be updated when new instances of BOriS are published, can be downloaded in full and in user-defined parts.
DOI: 10.6084/m9.figshare.9919130
title: A cadherin switch marks germ layer formation in the diploblastic sea anemone Nematostella vectensis

description: It is a supplementary information to a publication : "A cadherin switch marks germ layer formation in the diploblastic sea anemone Nematostella vectensis"<br>Ekaterina A. Pukhlyakova, Anastasia O. Kirillova, Yulia A. Kraus, Bob Zimmermann and Ulrich Technau<br>Development (2019) 146, dev174623. doi:10.1242/dev.174623
DOI: 10.6084/m9.figshare.9919136.v1
title: Lohse_Waichman_IGG_ReplicationPackage

description: IGG Dataset for Replication Purposes
DOI: 10.5281/zenodo.2663308
title: Test data for sv-callers workflow

description: This distribution contains data analyzed by the sv-callers workflow (v1.1.0). It includes sequence files in FASTA, ENCODE regions in BED, detected structural variants (SVs) in VCF, workflow config files and Jupyter Notebook with R code that compares the SV call sets and generates figures (Venn & UpSet diagrams). Large BAMs including index files were excluded due to max. upload file size, however, these files are freely available from the NCBI FTP server and the ENA database (see README files).
DOI: 10.6084/m9.figshare.9919130.v1
title: A cadherin switch marks germ layer formation in the diploblastic sea anemone Nematostella vectensis

description: It is a supplementary information to a publication : "A cadherin switch marks germ layer formation in the diploblastic sea anemone Nematostella vectensis"<br>Ekaterina A. Pukhlyakova, Anastasia O. Kirillova, Yulia A. Kraus, Bob Zimmermann and Ulrich Technau<br>Development (2019) 146, dev174623. doi:10.1242/dev.174623
DOI: 10.6084/m9.figshare.9919145.v1
title: BOriS DB v1

description: BOriS DB is a database of <i>oriC</i> sequences gathered using BOriS. Currently, it contains around 26.000 sequences that were identified from Gammaproteobacteria using γBOriS, which makes it the largest dataset of <i>oriC</i> sequences publicly available for both Gammaproteobacteria and Bacteria in general. BOriS DB, which will be updated when new instances of BOriS are published, can be downloaded in full and in user-defined parts.
DOI: 10.6084/m9.figshare.9919025
title: Assessing Collaborative Governance Outcomes and Indicators across Spatial and Temporal Scales: Stewardship Contract Implementation by the United States Forest Service

description: Scholarship on collaboration in natural resource management is restricted by a lack of large-N assessments and mixed methods approach to examine relationships between collaborative structures and processes, and management actions and outcomes. This paper examines the relationship between perceived levels of collaboration, collaborative process indicators, and benefits of USDA Forest Service stewardship contracts at a broad spatial and temporal scale using mixed methodology. This study found higher levels of collaboration were strongly associated with jointly initiated processes that included a breadth of interests and utilized a broad range of outreach mechanisms and opportunities for engagement. Highly collaborative processes were closely linked with attaining project objectives and social and economic benefits. Findings contribute to defining collaboration by uncovering the relationship between perceived levels of collaboration, the role of process characteristics, and perceived benefits of collaborative stewardship contracting processes through a large-N dataset (<i>n</i> = 1,064) and case study (<i>n</i> = 61) findings.
DOI: 10.6084/m9.figshare.9919025.v1
title: Assessing Collaborative Governance Outcomes and Indicators across Spatial and Temporal Scales: Stewardship Contract Implementation by the United States Forest Service

description: Scholarship on collaboration in natural resource management is restricted by a lack of large-N assessments and mixed methods approach to examine relationships between collaborative structures and processes, and management actions and outcomes. This paper examines the relationship between perceived levels of collaboration, collaborative process indicators, and benefits of USDA Forest Service stewardship contracts at a broad spatial and temporal scale using mixed methodology. This study found higher levels of collaboration were strongly associated with jointly initiated processes that included a breadth of interests and utilized a broad range of outreach mechanisms and opportunities for engagement. Highly collaborative processes were closely linked with attaining project objectives and social and economic benefits. Findings contribute to defining collaboration by uncovering the relationship between perceived levels of collaboration, the role of process characteristics, and perceived benefits of collaborative stewardship contracting processes through a large-N dataset (<i>n</i> = 1,064) and case study (<i>n</i> = 61) findings.
DOI: 10.6084/m9.figshare.9918971
title: Genotypes of wild-caught samples from Genetic convergence of industrial melanism in three geometrid moths

description: Sequence identity of alleles, multi-locus genotypes of population samples, and contingency tables.
DOI: 10.6084/m9.figshare.9918974
title: Mapping families from Genetic convergence of industrial melanism in three geometrid moths

description: Haplotype segregation and recombination in mapping families of Odontopera bidentata and Phigalia pilosaria
DOI: 10.6084/m9.figshare.9918965
title: Primers and amplicon sequences from Genetic convergence of industrial melanism in three geometrid moths

description: PCR and sequencing primers (and amplicon refrence sequences) used for linkage mapping and association study.
DOI: 10.6084/m9.figshare.9918965.v1
title: Primers and amplicon sequences from Genetic convergence of industrial melanism in three geometrid moths

description: PCR and sequencing primers (and amplicon refrence sequences) used for linkage mapping and association study.
DOI: 10.6084/m9.figshare.9918971.v1
title: Genotypes of wild-caught samples from Genetic convergence of industrial melanism in three geometrid moths

description: Sequence identity of alleles, multi-locus genotypes of population samples, and contingency tables.
DOI: 10.6084/m9.figshare.9918974.v1
title: Mapping families from Genetic convergence of industrial melanism in three geometrid moths

description: Haplotype segregation and recombination in mapping families of Odontopera bidentata and Phigalia pilosaria
DOI: 10.6084/m9.figshare.9918887
title: Data from "Arm movements induced by non-invasive optogenetic stimulation of the motor cortex in the common marmoset"

description: Each Figure panel is given in xlsx format as Figure*_data.xlsx
DOI: 10.6084/m9.figshare.9918887.v1
title: Data from "Arm movements induced by non-invasive optogenetic stimulation of the motor cortex in the common marmoset"

description: Each Figure panel is given in xlsx format as Figure*_data.xlsx
DOI: 10.6084/m9.figshare.9918821
title: Figure1_data.xlsx

description: test
DOI: 10.6084/m9.figshare.9918821.v1
title: Figure1_data.xlsx

description: test
DOI: 10.6084/m9.figshare.9918791
title: Embedding online, design-focused data visualization instruction in an upper-division undergraduate atmospheric science course

description: An interdisciplinary undergraduate atmospheric science modeling course was cotaught at a midsize public university by three professors from atmospheric science, statistics, and design using a blended learning approach. The in-class portion of the course taught upper-level students numerical weather prediction modeling and statistical evaluation methods. Online modules were used to teach data visualization techniques and three foundational design principles upon which their efficacy depends : legibility, visual hierarchy, and appropriate use of color. Geoscience students need data visualization skills to prepare for careers in government, industry, and research that increasingly require work with big data and communication with diverse collaborators and audiences. This article focuses on the instructional approach for the visualization component of the course—specifically, the three teaching innovations used: online modules, an interdisciplinary teaching team, and design-focused data visualization instruction. Although course enrollment was low at four students, several valuable lessons were learned that can improve the teaching of visualization in geoscience courses, including the utility of structuring visualization instruction around two separate but complementary visualization skills: visualization for analysis and visualization for sharing knowledge. Evaluation of students’ visualization work at the conclusion of the course demonstrated improvement in the foundational design principles as well as improved ability to select appropriate visualization strategies for different situations. The methods used to assess these improvements are presented alongside illustrative examples of student work. Pre- and postcourse surveys indicate the students felt more confident in creating data visualizations upon completion of the course, and qualitative assessments of student work confirm increased application of foundational design principles in visualizations created by the students. The authors argue that teaching visualization as an online supplement to other geoscience instruction is a potentially replicable model for improving students’ learning about visualization. This is especially true when such instruction relies on open-source programs and materials and leverages interdisciplinary expertise in course design.
DOI: 10.17171/1-3-6048-80
title: 6048
title: Data from JPL data

description: Babylonian Diaries
DOI: 10.17171/1-3-6048-13
title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
DOI: 10.17171/1-3-6048-27
title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

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title: 6048
title: Data from JPL data

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title: Data from JPL data

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title: 6048
title: Data from JPL data

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title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

description: Babylonian Diaries
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title: 6048
title: Data from JPL data

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title: 6048
title: Data from JPL data

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title: 6048
title: Data from JPL data

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title: 6048
title: Data from JPL data

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title: 6048
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title: 6048
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title: 6048
title: Data from JPL data

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title: 6048
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title: 6049
title: Data from JPL data

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title: 6049
title: Data from JPL data

description: Babylonian Diaries
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title: Data from JPL data

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title: Data from JPL data

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title: Data from JPL data

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title: 6049
title: Data from JPL data

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title: 6049
title: Data from JPL data

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