cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12739508.v1
title: original data from Non-trivial avalanches triggered by shear banding in compression of metallic glass foams

description: Ductile metallic glass foams (DMGFs) are a new type of structural material with a perfect combination of high strength and toughness. Owing to their disordered atomic-scale microstructures and randomly distributed macroscopic voids, the compressive deformation of DMGFs proceeds through multiple nanoscale shear bands accompanied by local fracture of cellular structures, which induces avalanche-like intermittences in stress–strain curves. In this paper, we present a statistical analysis, including distributions of avalanche size, energy dissipation, waiting times and aftershock sequence, on such a complex dynamic process, which is dominated by shear banding. After eliminating the influence of structural disorder, we demonstrate that, in contrast to the mean-field results of their brittle counterparts, scaling laws in DMGFs are characterized with different exponents. It is shown that the occurrence of non-trivial scaling behaviours is attributed to the localized plastic yielding, which effectively prevents the system from building up a long-range correlation. This accounts for the high structural stability and energy absorption performance of DMGFs. Furthermore, our results suggest that such shear banding dynamics introduce an additional characteristic time scale, which leads to a universal gamma distribution of waiting times.
DOI: 10.6084/m9.figshare.12739454
title: Supplementary Files S2

description: RetroTector output table of the annotation of full-length ERVs
DOI: 10.6084/m9.figshare.12739460
title: Supplementary Files S3

description: LTRharvest + LTRdigest annotation of full-length ERVs
DOI: 10.6084/m9.figshare.12739460.v1
title: Supplementary Files S3

description: LTRharvest + LTRdigest annotation of full-length ERVs
DOI: 10.6084/m9.figshare.12739454.v1
title: Supplementary Files S2

description: RetroTector output table of the annotation of full-length ERVs
DOI: 10.6084/m9.figshare.12739436
title: Dataset - A Comprehensive Evaluation of Contact Recombination and Contact Resistivity Losses in Industrial Silicon Solar Cells

description: This dataset contains the contact resistivity and contact recombination data associated with the following publication.The contact resistivity data was collected on cTLM, wide pad TLM and narrow pad TLM. The contact recombination data was collected on mini-cells with variation on finger width and spacing. The sample firing temperature was ranging 740 C - 840 C. The finger width was varied from 60 um - 400 um. The finger spacing was varied from 0.8mm - 2.5 mm. <br><br>M. Li <em>et al</em>., "A Comprehensive Evaluation of Contact Recombination and Contact Resistivity Losses in Industrial Silicon Solar Cells," in <em>IEEE Journal of Photovoltaics</em>, doi: 10.1109/JPHOTOV.2020.3003792.<br>
DOI: 10.6084/m9.figshare.12739481.v1
title: PSAAP II Particle-Turbulence-Radiation Temperature Response

description: Data analyzed in the paper "Data-Driven dimensional analysis of heat transfer in irradiated particle-laden turbulent flow." Contains CSV of simulation settings and fluid/particle temperature rise at different stations. See paper for more details.<br>
DOI: 10.6084/m9.figshare.12739433
title: Supplementary Files S1

description: RepeatMasker annotation output table
DOI: 10.6084/m9.figshare.12739433.v1
title: Supplementary Files S1

description: RepeatMasker annotation output table
DOI: 10.6084/m9.figshare.12739378
title: CAD File of rough segment from Assessment of surface roughness and blood rheology on local coronary hemodynamics: a multi-scale computational fluid dynamics study

description: File S2: CAD file of a rough 3.5 mm diameter rough segment
DOI: 10.6084/m9.figshare.12739378.v1
title: CAD File of rough segment from Assessment of surface roughness and blood rheology on local coronary hemodynamics: a multi-scale computational fluid dynamics study

description: File S2: CAD file of a rough 3.5 mm diameter rough segment
DOI: 10.6084/m9.figshare.12739181
title: Data for "Spatial arrangement of prey affects the shape of ratio-dependent functional response in strongly antagonistic predators"

description: Data used for Hossie & Murray 2016 Ecology 97: 834-841
DOI: 10.6084/m9.figshare.12739181.v1
title: Data for "Spatial arrangement of prey affects the shape of ratio-dependent functional response in strongly antagonistic predators"

description: Data used for Hossie & Murray 2016 Ecology 97: 834-841
DOI: 10.6084/m9.figshare.12739118
title: Airzone Classification for UAS (data)

description: Dataset of the Gangnam area for "Three-Dimensional Network-based Airzone Classification for an Unmanned Aerial System in an Urban Environment"
DOI: 10.6084/m9.figshare.12739118.v2
title: Airzone Classification for UAS (data)

description: Dataset of the Gangnam area for "Three-Dimensional Network-based Airzone Classification for an Unmanned Aerial System in an Urban Environment"
DOI: 10.6084/m9.figshare.12739118.v1
title: Airzone Classification for UAS (data)

description: Dataset of the Gangnam area for "Three-Dimensional Network-based Airzone Classification for an Unmanned Aerial System in an Urban Environment"
DOI: 10.6084/m9.figshare.12739160.v1
title: Data about power and gas system.xlsx

description: The attahed file includes the data of a coupled electric and gas networks for 5 cases.
DOI: 10.6084/m9.figshare.12739111
title: Tables from Sucking or lapping: facultative feeding mechanisms in honeybees (<i>Apis mellifera</i>)

description: Tables of the data recording the the occurence rate of the feeding patterns in honey bees, the switching of the feeding patterns in honey bees, the nectar intake rate and the corresponding energy intake rate of honey bees
DOI: 10.6084/m9.figshare.12739130.v1
title: Dataset

description: dataset
DOI: 10.17608/k6.auckland.12739073
title: Supplementary_table_8

description: Supplementary_table_8
DOI: 10.17608/k6.auckland.12739073.v1
title: Supplementary_table_8

description: Supplementary_table_8
DOI: 10.6084/m9.figshare.12739130.v2
title: Dataset

description: dataset
DOI: 10.17608/k6.auckland.12739055
title: Supplementary_table_6

description: Supplementary_table_6
DOI: 10.17608/k6.auckland.12739061
title: Supplementary_table_7

description: Supplementary_table_7
DOI: 10.6084/m9.figshare.12739058
title: beamspectra-804795-2020-07-08-11-07-41.xlsChemistry analysis

description: Data show details of measurements on XRF spectrometer and a complete element analysis of concretion RB1, RB5 and RB10.
DOI: 10.17608/k6.auckland.12739061.v1
title: Supplementary_table_7

description: Supplementary_table_7
DOI: 10.6084/m9.figshare.12739058.v1
title: beamspectra-804795-2020-07-08-11-07-41.xls

description: Data show details of measurements on XRF spectrometer and a complete element analysis of concretion RB1, RB5 and RB10.
DOI: 10.17608/k6.auckland.12739037
title: Supplementary_table_5

description: Supplementary_table_5
DOI: 10.17608/k6.auckland.12739055.v1
title: Supplementary_table_6

description: Supplementary_table_6
DOI: 10.17608/k6.auckland.12739031
title: Supplementary_table_4

description: Supplementary_table_4
DOI: 10.17608/k6.auckland.12739037.v1
title: Supplementary_table_5

description: Supplementary_table_5
DOI: 10.6084/m9.figshare.12739130.v3
title: Dataset

description: dataset
DOI: 10.17608/k6.auckland.12739016
title: Supplementary_table_3

description: Supplementary_table_3
DOI: 10.17608/k6.auckland.12739031.v1
title: Supplementary_table_4

description: Supplementary_table_4
DOI: 10.17608/k6.auckland.12738998
title: Supplementary_table_2

description: Supplementary_table_2
DOI: 10.6084/m9.figshare.12738992
title: Plant community cover

description: Plant community cover
DOI: 10.17608/k6.auckland.12738998.v1
title: Supplementary_table_2

description: Supplementary_table_2
DOI: 10.17608/k6.auckland.12739016.v1
title: Supplementary_table_3

description: Supplementary_table_3
DOI: 10.17608/k6.auckland.12738986
title: Supplementary_table_1

description: Supplementary_table_1
DOI: 10.6084/m9.figshare.12738992.v1
title: Plant community cover

description: Plant community cover
DOI: 10.6084/m9.figshare.12738983
title: Statistical Evaluation cooling

description: Statistical analysis of raw data<br>
DOI: 10.6084/m9.figshare.12738983.v1
title: Statistical Evaluation cooling

description: Statistical analysis of raw data<br>
DOI: 10.6084/m9.figshare.12738878
title: Plant community cover

description: Plant community cover
DOI: 10.6084/m9.figshare.12738878.v1
title: Plant community cover

description: Plant community cover
DOI: 10.6084/m9.figshare.12738788
title: Plant soil and microbial attributes

description: Plant soil and microbial attributes used in the manuscript.
DOI: 10.6084/m9.figshare.12738770
title: Supplementary Material for: COVID-19 in Hospitalized Patients on Chronic Peritoneal Dialysis: A Case Series

description: <b><i>Background:</i></b> The COVID-19 pandemic has affected the end-stage kidney disease (ESKD) population, with high mortality rates reported among patients on hemodialysis. However, the degree to which it has affected the peritoneal dialysis (PD) population in the United States has not yet been elucidated. In this report, we describe the clinical characteristics, presentations, clinical course, and outcomes of ESKD patients on PD hospitalized with COVID-19. <b><i>Methods:</i></b> We describe the characteristics, presentation, and outcomes of adult ESKD patients on chronic PD hospitalized with CO­VID-19 in our 13 major hospitals in the NY health system using descriptive statistical analysis. <b><i>Results:</i></b> Of 419 hospitalized patients with ESKD, 11 were on chronic PD therapy (2.6%). Among those 11, 3 patients required mechanical ventilation, 2 of whom died. Of the entire cohort, 9 of the 11 patients (82%) were discharged alive. While fever was a common presentation, more than half of our patients also presented with diarrhea. Interestingly, 3 patients were diagnosed with culture-negative peritonitis during their hospitalization. Seven patients reported positive SARS-CoV-2 exposure from a member of their household. <b><i>Conclusion:</i></b> Hospitalized patients on PD with COVID-19 had a relatively mild course, and majority of them were discharged home.
DOI: 10.6084/m9.figshare.12738788.v1
title: Plant soil and microbial attributes

description: Plant soil and microbial attributes used in the manuscript.
DOI: 10.6084/m9.figshare.12738770.v1
title: Supplementary Material for: COVID-19 in Hospitalized Patients on Chronic Peritoneal Dialysis: A Case Series

description: <b><i>Background:</i></b> The COVID-19 pandemic has affected the end-stage kidney disease (ESKD) population, with high mortality rates reported among patients on hemodialysis. However, the degree to which it has affected the peritoneal dialysis (PD) population in the United States has not yet been elucidated. In this report, we describe the clinical characteristics, presentations, clinical course, and outcomes of ESKD patients on PD hospitalized with COVID-19. <b><i>Methods:</i></b> We describe the characteristics, presentation, and outcomes of adult ESKD patients on chronic PD hospitalized with CO­VID-19 in our 13 major hospitals in the NY health system using descriptive statistical analysis. <b><i>Results:</i></b> Of 419 hospitalized patients with ESKD, 11 were on chronic PD therapy (2.6%). Among those 11, 3 patients required mechanical ventilation, 2 of whom died. Of the entire cohort, 9 of the 11 patients (82%) were discharged alive. While fever was a common presentation, more than half of our patients also presented with diarrhea. Interestingly, 3 patients were diagnosed with culture-negative peritonitis during their hospitalization. Seven patients reported positive SARS-CoV-2 exposure from a member of their household. <b><i>Conclusion:</i></b> Hospitalized patients on PD with COVID-19 had a relatively mild course, and majority of them were discharged home.
DOI: 10.6084/m9.figshare.12738695.v1
title: single molecule RNA in Drosophila embryos

description: Spinning disk confocal microscopy of <i>centrocortin </i>and <i>gapdh </i>RNA in <i>Drosophila </i>early<i> </i>embryos. <br>The "raw-data-metadata.csv" file includes a key to explain which RNA is imaged in each image.
DOI: 10.6084/m9.figshare.12738610
title: ESM Supplementary Methods, Tables S2-S4, and Figure S1-S2 from Repeated evidence that the accelerated evolution of sperm is associated with their fertilization function

description: Supplementary methods, comparison of evolutionary models, pairwise results from analyses, results from COI-derived phylogeny, and visualization of phylogenies.
DOI: 10.6084/m9.figshare.12738610.v1
title: ESM Supplementary Methods, Tables S2-S4, and Figure S1-S2 from Repeated evidence that the accelerated evolution of sperm is associated with their fertilization function

description: Supplementary methods, comparison of evolutionary models, pairwise results from analyses, results from COI-derived phylogeny, and visualization of phylogenies.
DOI: 10.6084/m9.figshare.12738589
title: A2. Glass Chemistry. Expanding the toolbox for dating basaltic lava sequences: <sup>40</sup>Ar–<sup>39</sup>Ar dating of silicic volcanic glass from interbeds.

description: A2: Electron microprobe information with calibration and sample data.
DOI: 10.6084/m9.figshare.12738586
title: A3. Ar–Ar data. Expanding the toolbox for dating basaltic lava sequences: <sup>40</sup>Ar–<sup>39</sup>Ar dating of silicic volcanic glass from interbeds.

description: A3: Ar isotopic data of blanks and samples, data reduction software, J values, criteria for age calculation and images of age spectra and inverse isochrons
DOI: 10.6084/m9.figshare.12738589.v1
title: A2. Glass Chemistry. Expanding the toolbox for dating basaltic lava sequences: <sup>40</sup>Ar–<sup>39</sup>Ar dating of silicic volcanic glass from interbeds.

description: A2: Electron microprobe information with calibration and sample data.
DOI: 10.6084/m9.figshare.12738583
title: A1. Samples location. Expanding the toolbox for dating basaltic lava sequences: <sup>40</sup>Ar–<sup>39</sup>Ar dating of silicic volcanic glass from interbeds.

description: A1: Samples location, stratigraphic position and depositional environments.
DOI: 10.6084/m9.figshare.12738586.v1
title: A3. Ar–Ar data. Expanding the toolbox for dating basaltic lava sequences: <sup>40</sup>Ar–<sup>39</sup>Ar dating of silicic volcanic glass from interbeds.

description: A3: Ar isotopic data of blanks and samples, data reduction software, J values, criteria for age calculation and images of age spectra and inverse isochrons
DOI: 10.6084/m9.figshare.12738545
title: List of supplementary files.docx

description: Supplementary files for "Functional divergence of mammalian TFAP2a and TFAP2b transcription factors for bidirectional sleep control"<br>
DOI: 10.6084/m9.figshare.12738583.v1
title: A1. Samples location. Expanding the toolbox for dating basaltic lava sequences: <sup>40</sup>Ar–<sup>39</sup>Ar dating of silicic volcanic glass from interbeds.

description: A1: Samples location, stratigraphic position and depositional environments.
DOI: 10.6084/m9.figshare.12738506
title: Supplementary Materials from Unification of aggregate growth models by emergence from cellular and intracellular mechanisms

description: Multicellular aggregate growth is regulated by nutrient availability and removal of metabolites, but the specifics of growth dynamics are dependent on cell type and environment. Classical models of growth are based on differential equations. While in some cases these classical models match experimental observations, they can only predict growth of a limited number of cell types and so can only be selectively applied. Currently, no classical model provides a general mathematical representation of growth for any cell type and environment. This discrepancy limits their range of applications, which a general modelling framework can enhance. In this work, a hybrid cellular Potts model is used to explain the discrepancy between classical models as emergent behaviours from the same mathematical system. Intracellular processes are described using probability distributions of local chemical conditions for proliferation and death and simulated. By fitting simulation results to a generalization of the classical models, their emergence is demonstrated. Parameter variations elucidate how aggregate growth may behave like one classical growth model or another. Three classical growth model fits were tested, and emergence of the Gompertz equation was demonstrated. Effects of shape changes are demonstrated, which are significant for final aggregate size and growth rate, and occur stochastically.
DOI: 10.6084/m9.figshare.12738506.v1
title: Supplementary Materials from Unification of aggregate growth models by emergence from cellular and intracellular mechanisms

description: Multicellular aggregate growth is regulated by nutrient availability and removal of metabolites, but the specifics of growth dynamics are dependent on cell type and environment. Classical models of growth are based on differential equations. While in some cases these classical models match experimental observations, they can only predict growth of a limited number of cell types and so can only be selectively applied. Currently, no classical model provides a general mathematical representation of growth for any cell type and environment. This discrepancy limits their range of applications, which a general modelling framework can enhance. In this work, a hybrid cellular Potts model is used to explain the discrepancy between classical models as emergent behaviours from the same mathematical system. Intracellular processes are described using probability distributions of local chemical conditions for proliferation and death and simulated. By fitting simulation results to a generalization of the classical models, their emergence is demonstrated. Parameter variations elucidate how aggregate growth may behave like one classical growth model or another. Three classical growth model fits were tested, and emergence of the Gompertz equation was demonstrated. Effects of shape changes are demonstrated, which are significant for final aggregate size and growth rate, and occur stochastically.
DOI: 10.6084/m9.figshare.12738485
title: Data for ancestral area estimation from Ancient crested penguin constrains timing of recruitment into seabird hotspot

description: Electronic supplementary material s2
DOI: 10.6084/m9.figshare.12738476
title: Vanni et al. 2020 Figure-data

description: Data used to generate the main figures in the Vanni et al. 2020 paper.<br>The code to reproduce the figure can be found at https://github.com/functional-dark-side/vanni_et_al-figures
DOI: 10.6084/m9.figshare.12738485.v1
title: Data for ancestral area estimation from Ancient crested penguin constrains timing of recruitment into seabird hotspot

description: Electronic supplementary material s2
DOI: 10.6084/m9.figshare.12738476.v1
title: Vanni et al. 2020 Figure-data

description: Data used to generate the main figures in the Vanni et al. 2020 paper.<br>The code to reproduce the figure can be found at https://github.com/functional-dark-side/vanni_et_al-figures
DOI: 10.6084/m9.figshare.12738395
title: Supplementary Material for: Personalized Approach of Severe Eosinophilic Asthma Patients Treated with Mepolizumab and Benralizumab

description: <b><i>Background:</i></b> New anti-IL-5 antibodies, mepolizumab and benralizumab, have recently been approved for severe asthma, sharing the same inclusion criteria. <b><i>Objective:</i></b> To contribute on biomarkers research leading to the personalized choice, we investigated L-selectin, Krebs von den Lungen (KL-6), and lymphocyte subsets as bioindicators of airway hyper-responsiveness and remodeling. <b><i>Materials and Methods:</i></b> A cohort of 28 patients affected by severe eosinophilic asthma were treated with anti-IL-5 drugs. According to clinical parameters, patients were subdivided into early and partial responders. Lymphocytes subsets were analyzed through flow cytometry, while KL-6 and sL-selectin were analyzed on serum samples. Clinical, functional, and immunological data at baseline (T0), after 1 month (T1), and 6 months of therapy were collected in a database. <b><i>Results:</i></b> All treated patients showed an increase in the percentage of forced expiratory volume in the first second (FEV1) and FEV1/forced vital capacity ratio and a decrease of peripheral eosinophils for both drugs after 1 month of treatment. Mepolizumab-treated patients also showed decreased CD8<sup>+</sup> and NKT-like cell percentages and a significant increase in sL-selectin concentrations between T0 and T1. Stratifying the cohort of our patients in early and partial responders at T0, they showed a reduction of peripheral eosinophils, sL-selectin and KL-6, while no differences were found at T0 between early and partial responders patients treated with benralizumab. <b><i>Conclusions:</i></b> This real-life study provides new insights for the personalized approach to severe asthma therapy. Although preliminary, the results indicate that besides eosinophils, KL-6 and sL-selectin are useful as biomarkers of early response that can also involve in the pathogenesis of severe asthma.
DOI: 10.6084/m9.figshare.12738395.v1
title: Supplementary Material for: Personalized Approach of Severe Eosinophilic Asthma Patients Treated with Mepolizumab and Benralizumab

description: <b><i>Background:</i></b> New anti-IL-5 antibodies, mepolizumab and benralizumab, have recently been approved for severe asthma, sharing the same inclusion criteria. <b><i>Objective:</i></b> To contribute on biomarkers research leading to the personalized choice, we investigated L-selectin, Krebs von den Lungen (KL-6), and lymphocyte subsets as bioindicators of airway hyper-responsiveness and remodeling. <b><i>Materials and Methods:</i></b> A cohort of 28 patients affected by severe eosinophilic asthma were treated with anti-IL-5 drugs. According to clinical parameters, patients were subdivided into early and partial responders. Lymphocytes subsets were analyzed through flow cytometry, while KL-6 and sL-selectin were analyzed on serum samples. Clinical, functional, and immunological data at baseline (T0), after 1 month (T1), and 6 months of therapy were collected in a database. <b><i>Results:</i></b> All treated patients showed an increase in the percentage of forced expiratory volume in the first second (FEV1) and FEV1/forced vital capacity ratio and a decrease of peripheral eosinophils for both drugs after 1 month of treatment. Mepolizumab-treated patients also showed decreased CD8<sup>+</sup> and NKT-like cell percentages and a significant increase in sL-selectin concentrations between T0 and T1. Stratifying the cohort of our patients in early and partial responders at T0, they showed a reduction of peripheral eosinophils, sL-selectin and KL-6, while no differences were found at T0 between early and partial responders patients treated with benralizumab. <b><i>Conclusions:</i></b> This real-life study provides new insights for the personalized approach to severe asthma therapy. Although preliminary, the results indicate that besides eosinophils, KL-6 and sL-selectin are useful as biomarkers of early response that can also involve in the pathogenesis of severe asthma.
DOI: 10.6084/m9.figshare.12738476.v4
title: Vanni et al. 2020 Figure-data

description: Data used to generate the main figures in the Vanni et al. 2020 paper.<br>The code to reproduce the figure can be found at https://github.com/functional-dark-side/vanni_et_al-figures
DOI: 10.6084/m9.figshare.12738476.v3
title: Vanni et al. 2020 Figure-data

description: Data used to generate the main figures in the Vanni et al. 2020 paper.<br>The code to reproduce the figure can be found at https://github.com/functional-dark-side/vanni_et_al-figures