cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/f8977cf7710e624e12f1a52e40cf883d
title: RMP01 Rainfall manipulation plot study at Konza Prairie

description: Rainfall Manipulation Plots facility (RaMPs) is a unique experimental infrastructure that allows us to manipulate precipitation events and temperature, and assess population community, and ecosystem responses in native grassland. This facility allows us to manipulate the amount and timing of individual precipitation events in replicated field plots at the Konza Prairie Long-Term Ecological Research (LTER) site. We used data from a unique 15-year long rainfall manipulation experiment at the Konza Prairie Biological Station in northeastern Kansas, USA, to determine how altered precipitation patterns (fewer, larger events) impacted plant species composition and structure in an annually burned, ungrazed, native tallgrass prairie. We tested two hypotheses. First, based on the HRF, we predicted that directional change in grass and forb cover and richness and community composition would eventually occur after a lag period under the altered precipitation treatment. Second, we predicted that change in cover and composition under altered precipitation would be driven by the response of forbs more so than grasses because the dominant grasses are reported to be buffered against precipitation variability1,44 and changes in the cover and richness of forbs contribute disproportionately to community responses to other drivers in this grassland.
DOI: 10.6084/m9.figshare.22822346
title: <strong>The therapeutic effect of glycyrrhizic acid compound ointment on imiquimod-induced psoriasis-like disease in mice</strong>

description: <strong>Scoring severity of skin inflammation</strong>
DOI: 10.6084/m9.figshare.22822346.v2
title: <strong>The therapeutic effect of glycyrrhizic acid compound ointment on imiquimod-induced psoriasis-like disease in mice</strong>

description: <strong>Scoring severity of skin inflammation</strong>
DOI: 10.6084/m9.figshare.22822346.v1
title: <strong>The therapeutic effect of glycyrrhizic acid compound ointment on imiquimod-induced psoriasis-like disease in mice</strong>

description: <strong>Scoring severity of skin inflammation</strong>
DOI: 10.6084/m9.figshare.21347831
title: Electrophysiological patterns of visual word recognition in deaf and hearing readers: an ERP mega-study

description: Deaf and hearing readers have different access to spoken phonology which may affect the representation and recognition of written words. We used ERPs to investigate how a matched sample of deaf and hearing adults (total n = 90) responded to lexical characteristics of 480 English words in a go/no-go lexical decision task. Results from mixed effect regression models showed (a) visual complexity produced small effects in opposing directions for deaf and hearing readers, (b) similar frequency effects, but shifted earlier for deaf readers, (c) more pronounced effects of orthographic neighbourhood density for hearing readers, and (d) more pronounced effects of concreteness for deaf readers. We suggest hearing readers have visual word representations that are more integrated with phonological representations, leading to larger lexically-mediated effects of neighbourhood density. Conversely, deaf readers weight other sources of information more heavily, leading to larger semantically-mediated effects and altered responses to low-level visual variables.
DOI: 10.6084/m9.figshare.21717749
title: Processing argument structure complexity in Basque-Spanish bilinguals

description: Previous research on argument structure (AS) has shown that verb processing costs scale with the number of arguments and as a result of non-canonical thematic mapping. The Basque language has unique AS: Basque unergatives and transitives select transitive auxiliary and ergative subject case markings, while unaccusatives are syntactically less complex. We studied the contribution of these syntactic factors in seventy-one, simultaneous Basque-Spanish bilinguals, measuring their performance on unergative, unaccusatives, and transitive verbs in a lexical decision and a sentence production task. We observed no differences between verb groups in the lexical decision task. In the production task, Basque unergatives elicited more ungrammatical sentences, while Spanish unaccusatives, in line with previous findings, elicited longer speech onset times. Our results indicate that AS processing can differ across languages, calling for further cross-linguistic investigation.
DOI: 10.6084/m9.figshare.21347831.v1
title: Electrophysiological patterns of visual word recognition in deaf and hearing readers: an ERP mega-study

description: Deaf and hearing readers have different access to spoken phonology which may affect the representation and recognition of written words. We used ERPs to investigate how a matched sample of deaf and hearing adults (total n = 90) responded to lexical characteristics of 480 English words in a go/no-go lexical decision task. Results from mixed effect regression models showed (a) visual complexity produced small effects in opposing directions for deaf and hearing readers, (b) similar frequency effects, but shifted earlier for deaf readers, (c) more pronounced effects of orthographic neighbourhood density for hearing readers, and (d) more pronounced effects of concreteness for deaf readers. We suggest hearing readers have visual word representations that are more integrated with phonological representations, leading to larger lexically-mediated effects of neighbourhood density. Conversely, deaf readers weight other sources of information more heavily, leading to larger semantically-mediated effects and altered responses to low-level visual variables.
DOI: 10.6073/pasta/5571e7975143d2f65b52eb4a995e9d7c
title: Luquillo Understory invertebrates Sticky Trap Samples

description: Sticky traps, designed to resemble resin globules that eventually could become amber, were coated with adhesive and placed on lower tree boles or on logs at one non-gap site at the LEF for 5 days during June 2004, January and July 2005, July 2006 and July 2007 (total 35 samples). Samples were dominated by Diptera (89% of specimens), with phorids representing 60%, mycetophilids 16%, dolichopodids 4%, sarcophagids 2%, cecidomyiids and chironomids 1% each, and other Diptera 5%. Other collected taxa included Hymenoptera (6% of specimens), with chalcidoid wasps 4%, little fire ant (Wasmania auropunctata) 1% and other Hymenoptera 1%; Coleoptera (2% of specimens), with curculionids 1% and other Coleoptera 1%; and a variety of other insects, spiders and mites representing 3%. Two small Anolis lizards and a small Eleutherodactylus frog also were captured.Â Arthropod composition in sticky traps from the LEF and in Dominican amber were similar. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.7924/r4ms3x82f
title: Data from: Social and early life determinants of survival from cradle to grave: a case study in wild baboons

description: Harsh early life environments are linked to a variety of negative outcomes in humans and non-human primates, including poor survival in adulthood.  Understanding the pathways that drive the relationship between early life adversity and reduced survival is key both for understanding the evolutionary and biological underpinnings of this relationship, and for informing social policy. In this study, we leverage a long-term dataset of a wild animal model of aging, baboons of the Amboseli ecosystem in southern Kenya, to test hypotheses about how adult physiological phenotypes link early life adversity to adult survival.  We find that for each additional source of early life adversity experienced by female baboons, the concentration of glucocorticoid metabolites in fecal samples (fGC) during adulthood increased by 12%, and adult lifespan decreased by 1.7 years.  However, we find little evidence that adult fGC profiles mediate the effects of early life adversity and adult survival.  Instead, we find independent effects of early life adversity and adult fGC concentrations on survival.  The negative effects of maternal loss and low maternal social connectedness on survival are also buffered by a decrease in fGC concentrations.  Our results show strong effects of early life environments on adult life and indicate that adult physiological processes can help mitigate the costs of negative early life environments.
DOI: 10.25345/c5zs2kp8r
title: MassIVE MSV000091946 - Cardiolipin prolongs the lifetimes of respiratory proteins in Drosophila flight muscle
title: To measure concurrently the lifetimes of proteins and lipids, we incubated fruit flies with stable isotope-labeled precursors (13C615N2-lysine or 13C6-glucose) and determined the relative abundance of heavy isotopomers in protein and lipid species by mass spectrometry. We restricted our analysis to a single, post-mitotic tissue, the indirect flight muscle, in order to measure lifetimes controlled by metabolic turnover but not tissue regeneration. Analysis of 680 protein and 45 lipid species, showed that the subunits of respiratory complexes I-V and the carriers for phosphate and ADP/ATP were among the longest-lived proteins in flight muscle (average half-life of 48+_16 days) while the molecular species of cardiolipin were the longest-lived lipids (average half-life of 27+_6 days). The remarkable longevity of these crista residents was not shared by all mitochondrial proteins, especially not by those residing in the matrix and the inner boundary membrane. Ablation of cardiolipin synthase, which causes replacement of cardiolipin by phosphatidylglycerol, and ablation of tafazzin, which causes partial replacement of cardiolipin by monolyso-cardiolipin, decreased the lifetimes of all subunits of the respiratory complexes. Ablation of tafazzin also decreased the lifetimes of the remaining cardiolipin species. These data suggest that an important function of cardiolipin in mitochondria is to protect respiratory complexes from degradation.
DOI: 10.6073/pasta/e467325c26af286c90a9e6053f2cd624
title: Habitat selection/Caracolus caracolla and other snails (2019 Ongoing)

description: Various habitat characteristics are presented, as well as the apparency of common plant taxa at 7 heights (every 0.5 m from ground level to 3 m). The files are divided because variables measured varied by year. This is Version 2020 of these data. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.6084/m9.figshare.22823102
title: just_dance_shorthen_probas

description: <em>Dataset containing comments and metadata information for multilabel predictions for different properties of comments.</em><br> <br> <em>The data has 216193 comments make on the just dance YouTube videos. It has metadata information about the date the</em><br> <em>comment was written and the number of "likes" it got. It also has</em><br> <em>42 multilabel binary target label columns,</em><br> <em>referring to the category classification of the comment.</em><br> <br> <em>This dataset is a modification of Just Dance @ YouTube dataset curated by the COIMBRA university,</em><br> <em>For additional details about the dataset, please refer to the original source:</em><br> <em>https://www.kaggle.com/datasets/renatojmsantos/just-dance-on-youtube.</em><br> <em>Dataset used under the following license: https://creativecommons.org/licenses/by/4.0/</em><br> <br> <em>Original publication:</em><br> <em>R. Santos, J. P. Arrais and P. A. Silva, "Analysing Games for Health through Users' Opinion Mining,"</em><br> <em>2021 IEEE 34th International Symposium on Computer-Based Medical Systems (CBMS), Aveiro, Portugal, 2021, pp. 319-323,</em><br> <em>doi: 10.1109/CBMS52027.2021.00035.</em>
DOI: 10.6084/m9.figshare.22823102.v1
title: just_dance_shorthen_probas

description: <em>Dataset containing comments and metadata information for multilabel predictions for different properties of comments.</em><br> <br> <em>The data has 216193 comments make on the just dance YouTube videos. It has metadata information about the date the</em><br> <em>comment was written and the number of "likes" it got. It also has</em><br> <em>42 multilabel binary target label columns,</em><br> <em>referring to the category classification of the comment.</em><br> <br> <em>This dataset is a modification of Just Dance @ YouTube dataset curated by the COIMBRA university,</em><br> <em>For additional details about the dataset, please refer to the original source:</em><br> <em>https://www.kaggle.com/datasets/renatojmsantos/just-dance-on-youtube.</em><br> <em>Dataset used under the following license: https://creativecommons.org/licenses/by/4.0/</em><br> <br> <em>Original publication:</em><br> <em>R. Santos, J. P. Arrais and P. A. Silva, "Analysing Games for Health through Users' Opinion Mining,"</em><br> <em>2021 IEEE 34th International Symposium on Computer-Based Medical Systems (CBMS), Aveiro, Portugal, 2021, pp. 319-323,</em><br> <em>doi: 10.1109/CBMS52027.2021.00035.</em>
DOI: 10.6073/pasta/5ecc892cf748a20ac23676655ccda649
title: Plant Apparency data - Habitat selection/Caracolus caracolla and other snails (2019 Ongoing)

description: Various habitat characteristics are presented, as well as the apparency of common plant taxa at 7 heights (every 0.5 m from ground level to 3 m). The files are divided because variables measured varied by year. This is Version 2020 of these data. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.6073/pasta/0ad2482aaed1ca923cef3341658774be
title: Elevational gradients of walking stick (Lamponius portoricensis) abundance

description: Abundance data were collected for Lamponius portoricensis from a mixed forest transect and from a palm dominated transect set along an elevational gradient in the Sonadora watershed. Each transect ranged from 300 m to 1000 m in elevation, with elevational strata located at 50 m intervals and 10 plots per stratum. No palm dominated forest could be located at 700 m in the watershed, resulting in 15 strata (150 plots) along the mixed forest transect and 14 strata (140 plots) along the palm forest transect. The data set includes 5 files that contain abundance data for walking sticks (Lamponius portoricensis) along an elevational gradient within the Sonadora River watershed. Three files contain data from the mixed forest transect but differ in the year during which they were collected (2007, 2008, 2017). The 'Walking Stick Palm" files contains data from a palm forest elevational transect from 2008 and 2017, for which all sites were located in palm dominated forest in the same watershed. Note: Plots at 250 m of elevation were only sampled during 2007, no palm dominated forest could be located at 750 m of elevation; that elevation is omitted from the palm transect. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.48331/scielodata.rog2nf
title: Replication Data for: Ecological and biological patterns of stream fish studies from the Piracicaba-Capivari-Jundiaí Basin (PCJ Basin, SP) assessed through a systematic review

description: Data on stream fish from de Piracicaba-Capivari-Jundiaí Basin in the State of São Paulo, Brazil. Data was obtained through a systematic review.
DOI: 10.48331/scielodata.rog2nf/cztf3o
title: README.txt

description: Information on authors and data collection
DOI: 10.48331/scielodata.rog2nf/slvwrg
title: Species list.tab

description: List of stream fish species from the Piracicaba-Capivari-Jundiaí Basin, SP, Brazil.
DOI: 10.48331/scielodata.rog2nf/vpblht
title: Fish species.tab

description: List of stream fish species from the Piracicaba-Capivari-Jundiaí Basin, SP, Brazil.
DOI: 10.5281/zenodo.7921117
title: FTIR dataset from the article "Resistance to Degradation of Silk Fibroin Hydrogels Exposed to Neuroinflammatory Environments"

description: The attached archive encounters the FTIR data used for the calculation of the β-sheet content of the silk fibroin hydrogels in the in-vitro experiments. Such data is used in main Figures 2<strong>c</strong> and 2<strong>d</strong>, 4<strong>a </strong>and 7<strong>a</strong> as well as Supplementary Figure 2<strong>a</strong> of the associated article. The acquisition of the files has been performed as indicated below: <strong>Equipment:</strong> Thermo Scientific™ Nicolet™ iS™ 5 Spectrometer (Thermofisher, United States) <strong>Acquisition Software:</strong> OMNIC 9.2.86 (Thermofisher, United States) <strong>Number of Scans:</strong> 64 <strong>Data Spacing: </strong>0.482 cm<sup> -1</sup> The files have been reported as raw complete spectrum including the absorbances in the wavenumbers from 600 to 1500 cm<sup> -1</sup> in the format of “.SPA”. In the following lines, we provide examples of software to process and analyze the spectra files included in the database. Python version 3.8 to 3.10 upon the availability of the “SpectroChemPy” (Travert and Christian, 2023) function. Matlab R2016a and newer upon the availability of the “LoadSpectra” (Oldenburg, 2023) function. OMNIC 9 (Thermofisher, United States). Essential FTIR (Operant LLC, United States). Provision of the data in other formats is available upon request. Inquiries may be directed to Daniel González-Nieto or Mahdi Yonesi. <strong>References:</strong> OLDENBURG, K. 2023. LoadSpectra. MATLAB Central File Exchange. TRAVERT, A. & CHRISTIAN, F. 2023. SpectroChemPy, a framework for processing, analyzing and modeling spectroscopic data for chemistry with Python. Github.
DOI: 10.5281/zenodo.7921116
title: FTIR dataset from the article "Resistance to Degradation of Silk Fibroin Hydrogels Exposed to Neuroinflammatory Environments"

description: The attached archive encounters the FTIR data used for the calculation of the β-sheet content of the silk fibroin hydrogels in the in-vitro experiments. Such data is used in main Figures 2<strong>c</strong> and 2<strong>d</strong>, 4<strong>a </strong>and 7<strong>a</strong> as well as Supplementary Figure 2<strong>a</strong> of the associated article. The acquisition of the files has been performed as indicated below: <strong>Equipment:</strong> Thermo Scientific™ Nicolet™ iS™ 5 Spectrometer (Thermofisher, United States) <strong>Acquisition Software:</strong> OMNIC 9.2.86 (Thermofisher, United States) <strong>Number of Scans:</strong> 64 <strong>Data Spacing: </strong>0.482 cm<sup> -1</sup> The files have been reported as raw complete spectrum including the absorbances in the wavenumbers from 600 to 1500 cm<sup> -1</sup> in the format of “.SPA”. In the following lines, we provide examples of software to process and analyze the spectra files included in the database. Python version 3.8 to 3.10 upon the availability of the “SpectroChemPy” (Travert and Christian, 2023) function. Matlab R2016a and newer upon the availability of the “LoadSpectra” (Oldenburg, 2023) function. OMNIC 9 (Thermofisher, United States). Essential FTIR (Operant LLC, United States). Provision of the data in other formats is available upon request. Inquiries may be directed to Daniel González-Nieto or Mahdi Yonesi. <strong>References:</strong> OLDENBURG, K. 2023. LoadSpectra. MATLAB Central File Exchange. TRAVERT, A. & CHRISTIAN, F. 2023. SpectroChemPy, a framework for processing, analyzing and modeling spectroscopic data for chemistry with Python. Github.
DOI: 10.6073/pasta/a4be5717282e70e29b3235a3baef2388
title: HRE01 Environmental heterogeneity restoration experiment at Konza Prairie

description: We manipulated key resources that influence plant diversity in tallgrass prairie (i.e., soil depth and nitrogen availability) to increase environmental heterogeneity prior to sowing native prairie species into a former agricultural field. We compared variability in nutrient availability, aboveground annual net primary productivity (ANPP), and the composition of species between replicate plots containing soil heterogeneity manipulations and plots with no resource manipulations (n = 4 per treatment) during the first 15 yr of community assembly as a test of the “environmental heterogeneity hypothesis.”
DOI: 10.5066/p9x9zdpk
title: Aeolian and drainage classification data for various archaeological sites in Grand Canyon National Park along the Colorado River from 1973 to 2022

description: These data were compiled to assess the risk of erosion to archaeological site preservation. The objective of the study is to evaluate changes in archaeological site condition over time as a function of two geomorphology based conceptual models that evaluate the extent to which sites are potentially affected by 1) erosion from gullies, and 2) wind-driven (aeolian) supply of river-sourced sand, respectively. These data represent the results of two classification metrics, based on the two conceptual models, applied to a population of 362 archaeological sites over multiple decades. Both conceptual models numerically rank geomorphic conditions with class values of 1 representing the best potential for archaeological site preservation and larger number class values (e.g. 2, 3, 4...) representing lower potential for archaeological site preservation. These data were collected in Grand Canyon National Park using interpretation of aerial photography acquired between 1973 and 2021, and field investigations conducted between 2000 and 2022. These data were collected by the U.S. Geological Survey and the National Park Service. These data can be used to assess the extent to which sites are affected by erosion from gullies controlled by the base-level of the Colorado River. These data can be used to evaluate how the wind-driven (aeolian) supply of river-sourced sand, essential for covering archaeological sites and protecting them from erosion, has changed over time. These data can be used to assess potential downstream effects of Glen Canyon Dam operations on archaeological site preservation. These data can be used to assess the extent to which dam regulated flows have influenced gully establishment and development as well as availability of the supply of river-sourced sand for wind-driven (aeolian) transport at each of the 362 archaeological sites over the last 5 decades. Observed changes in geomorphic condition can be used to infer potential changes in archaeological site integrity associated with decreased potential for archaeological site preservation.