cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30240295
title: Additional file 1 of A computational investigation into the role of tRNAs encoded by Shigella phage Sf14

description: Supplementary Material 1. Supplementary figure S1: median RSCU values of the Sf14 and S. flexneri 2457 T genomes Stacked bar graph comparing the median RSCU values of each codon in Sf14 and host S. flexneri 2457T. Asterisks indicate the difference in RSCU is significant. Supplementary figure S2: average RSCU values for the S. flexneri 2457 T genome and all gene groups of interest Bar graphs showing the average RSCU values for all codons in 2457 T for (A) genome, (B) metabolism genes, (C) biosynthesis genes, (D) gene expression genes, (E) stress response and drug resistance genes, and (F) transport and miscellaneous genes. Supplementary figure S3: average RSCU values for Sf14 genome and all Sf14 gene groups Bar graphs showing the average RSCU values for all codons in Sf14 (A) genome, (B) early genes, (C) middle genes, (D) late genes, and (E) hypothetical genes. Supplementary figure S4: PCA plot of RSCU scores for all codons in the Sf14 and S. flexneri 2457 T gene groups Genes are assigned a color based on their group, as indicated in the key on the right. An unlabeled version of this plot is available in the text (Fig. 4). Some labels are hidden due to multiple overlapping observations. Supplementary figure S5: tAI values for both Sf14 and S. flexneri 2457 T genomes and host genes of interest Bar graphs depicting the tAI values for the (A) host genome, (B) host genes of interest, (C) Sf14 genome; (D) Boxplot of the distribution of tAI values in S. flexneri 2457 T and Sf14. Supplementary figure S6: Sf14-encoded tRNA mutation frequency by isotype and position (A) Bar graph of the mutation frequency for Sf14 tRNAs according to their isotype. (B) Bar graph of the frequency of mutations at each anticodon loop position. Supplementary figure S7: comparison of tRNA ∆G values between Sf14 and S. flexneri 2457 T Free energy (∆G) values for Sf14-encoded tRNAs and their counterparts in 2457T. Sf14 ∆G values are on the y-axis, and 2457 T ∆G values are on the x-axis. Supplementary figure S8: ∆∆G values (Sf14 – S. flexneri 2457 T) and the impact of mutation position on ∆∆G Dot plot of the mutation position (x-axis) of Sf14 mutated tRNAs as it relates to ∆∆G values (y-axis). Position “0” indicates no mutations were found. Supplementary figure S9: secondary structure of four representative mutated Sf14-encoded tRNAs Four Sf14-encoded tRNAs were modeled and compared to their host counterparts, with mutations in the anticodon loops highlighted in yellow. The tRNAs modeled were (A) tRNA-Leu-CAA, (B) tRNA-Leu-TAG, (C) tRNA-Phe-GAA, and (D) tRNA-Gln-TTG.
DOI: 10.6084/m9.figshare.30240303
title: Additional file 6 of Non-truncating BMPR1A variants associated with familial colorectal cancer and adenomatous polyps

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.30240283
title: Additional file 3 of Simple but complex: aged care healthcare professionals’ perspectives on the design of a digital falls dashboard

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.30240285
title: Additional file 2 of Non-truncating BMPR1A variants associated with familial colorectal cancer and adenomatous polyps

description: Supplementary Material 2.
DOI: 10.13140/rg.2.2.33072.83208
title: Dedenko_FLT_Description_en.pdf
DOI: 10.6084/m9.figshare.30240282
title: Additional file 1 of Non-truncating BMPR1A variants associated with familial colorectal cancer and adenomatous polyps

description: Supplementary Figure 1. Predicted three-dimensional structures of wild-type and mutant BMPR1A proteins. A. Configurations by SWISS-MODEL. Confidence level of prediction is indicated by color scale as shown. B. Configurations by AlphaFold. Confidence level of prediction is indicated by color scale as shown.
DOI: 10.6084/m9.figshare.30240267
title: Additional file 2 of A link to the past: classical phage ISP infects the recently described Staphylococcus borealis species

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30240273
title: Additional file 3 of A link to the past: classical phage ISP infects the recently described Staphylococcus borealis species

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30240258
title: Additional file 3 of Selective inhibition of BRAF and CRAF sensitizes NF1-deficient malignant peripheral nerve sheath tumors to MEK inhibitors

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30240264
title: Additional file 1 of A link to the past: classical phage ISP infects the recently described Staphylococcus borealis species

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30240240
title: Additional file 2 of Quantitative proteomic analysis of Arabidopsis thaliana with different levels of phospholipid:diacylglycerol acyltransferase1 expression

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30240255
title: Additional file 2 of Selective inhibition of BRAF and CRAF sensitizes NF1-deficient malignant peripheral nerve sheath tumors to MEK inhibitors

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30240243
title: Additional file 3 of Quantitative proteomic analysis of Arabidopsis thaliana with different levels of phospholipid:diacylglycerol acyltransferase1 expression

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30240249
title: Additional file 1 of Selective inhibition of BRAF and CRAF sensitizes NF1-deficient malignant peripheral nerve sheath tumors to MEK inhibitors

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30240235
title: Additional file 3 of Obesity-depression-metabolism triad: amplification of cardiometabolic multimorbidity risk in Chinese adults (CHARLS 2011–2018)

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30240223
title: Additional file 5 of Analyzing the facial nerve at Zuker’s point using geometric morphometrics: a cadaveric study

description: Supplementary Material 5.
DOI: 10.6084/m9.figshare.30240232
title: Additional file 2 of Obesity-depression-metabolism triad: amplification of cardiometabolic multimorbidity risk in Chinese adults (CHARLS 2011–2018)

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30240220
title: Additional file 4 of Analyzing the facial nerve at Zuker’s point using geometric morphometrics: a cadaveric study

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.30240229
title: Additional file 1 of Obesity-depression-metabolism triad: amplification of cardiometabolic multimorbidity risk in Chinese adults (CHARLS 2011–2018)

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30240202
title: Additional file 1 of Multi-omics protein signaling networks identify sex-specific therapeutic candidates in lung adenocarcinoma

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30240135
title: Additional file 1 of Sertraline and inflammatory markers in major depression: a systematic review and meta-analysis

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.30240132
title: Additional file 1 of Antibiotic resistance and bacterial co-infections in COVID-19 patients in Iran: a systematic review and meta-analysis of hospitalized and non-hospitalized cases

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30240091
title: Additional file 5 of Understanding health-related quality of life of informal carers in amyotrophic lateral sclerosis: a scoping review and conceptual framework

description: Supplementary Material 5.
DOI: 10.6084/m9.figshare.30240094
title: Additional file 6 of Understanding health-related quality of life of informal carers in amyotrophic lateral sclerosis: a scoping review and conceptual framework

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.30240075
title: Additional file 10 of LncRNA CASC19 promotes pancreatic cancer progression by increasing PSPC1 protein stability and facilitating the oncogenic PSPC1/ β-Catenin pathway

description: Supplementary Material 10: Supplementary Table-S7 List of 53 RNA binding proteins obtained from RNA-pull down and mass-spectrometry that bound exclusively to sense strand of CASC19
DOI: 10.6084/m9.figshare.30240063
title: Additional file 6 of LncRNA CASC19 promotes pancreatic cancer progression by increasing PSPC1 protein stability and facilitating the oncogenic PSPC1/ β-Catenin pathway

description: Supplementary Material 6: Supplementary Table-S3 The details of the antibodies used in this study
DOI: 10.6084/m9.figshare.30240066
title: Additional file 7 of LncRNA CASC19 promotes pancreatic cancer progression by increasing PSPC1 protein stability and facilitating the oncogenic PSPC1/ β-Catenin pathway

description: Supplementary Material 7: Supplementary Table-S4 Common DEGs in pancreatic cancer from a microarray data and TCGA-RNA sequencing data
DOI: 10.6084/m9.figshare.30240069
title: Additional file 8 of LncRNA CASC19 promotes pancreatic cancer progression by increasing PSPC1 protein stability and facilitating the oncogenic PSPC1/ β-Catenin pathway

description: Supplementary Material 8: Supplementary Table-S5 Differentially expressed genes upon CASC19 overexpression in pancreatic cancer cell line MIAPaCa-2
DOI: 10.6084/m9.figshare.30240072
title: Additional file 9 of LncRNA CASC19 promotes pancreatic cancer progression by increasing PSPC1 protein stability and facilitating the oncogenic PSPC1/ β-Catenin pathway

description: Supplementary Material 9: Supplementary Table-S6 Differentially expressed genes upon CASC19 knockdown with siRNA in pancreatic cancer cell line MIAPaCa-2
DOI: 10.6084/m9.figshare.30240060
title: Additional file 5 of LncRNA CASC19 promotes pancreatic cancer progression by increasing PSPC1 protein stability and facilitating the oncogenic PSPC1/ β-Catenin pathway

description: Supplementary Material 5: Supplementary Table-S2 Information of the siRNAs used in this study for knockdown
DOI: 10.6084/m9.figshare.30240049
title: Additional file 1 of EMSY enhances glycolysis in ovarian cancer cells

description: Additional file 1. Figure S1. Western blot primary data for Fig. 2. Figure S2. Western blot primary data for Fig. 3. Figure S3. Western blot primary data for Fig. 5.
DOI: 10.6084/m9.figshare.30240034
title: Additional file 4 of Genome-wide systematic characterization of PHT gene family and its member involved in phosphate uptake in Orychophragmus violaceus

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.30239991
title: Additional file 2 of Is social connectedness still in decline after the Covid-19 pandemic? Cohort trends in secondary school students in Finland between 2017 and 2023

description: Supplementary material 2: Supplementary tables for estimated means and changes in social connectedness between 2019–2023
DOI: 10.6084/m9.figshare.30239998
title: Additional file 3 of Exploring the challenges faced by generic version of complex drugs: a scoping review

description: Additional file 3: Studies included in the data analysis.
DOI: 10.6084/m9.figshare.30239982
title: Additional file 1 of Educational aspirations of students in vocational upper secondary schools in Germany

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.30239976
title: Additional file 1 of Characterization of the five Amanita complete mitochondrial genome and the phylogenetic relationship with other Amanita fungi

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30239947
title: Additional file 3 of Genome-wide identification and transcription profiling of safflower (Carthamus tinctorius L.) HD-ZIP gene family under water deficit

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.30239934
title: Additional file 7 of Coupled transcriptome and proteome analysis of L3 and L4 developmental stages of Anisakis simplex s. s.: insights into target genes under glucose influence

description: Supplementary Material 7. Supplementary File 1 - results of RNA Seq analysis
DOI: 10.6084/m9.figshare.30239937
title: Additional file 8 of Coupled transcriptome and proteome analysis of L3 and L4 developmental stages of Anisakis simplex s. s.: insights into target genes under glucose influence

description: Supplementary Material 8. Supplementary File 2 - results of LC-MS/MS analysis
DOI: 10.6084/m9.figshare.30239938
title: Additional file 1 of Evolutionary and functional diversification of the DOG gene family in wheat (Triticum aestivum L.) and their roles in seed dormancy

description: Supplementary Material 1: Table S1: List of primers used for TaDOG genes expression analysis; Table S2: One-to-one orthologous relationships between wheat and wheat; Table S3: One-to-one orthologous relationships between wheat and rice; Table S4: One-to-one orthologous relationships between wheat and maize; Table S5: The number of cis-acting elements in the promoter region of TaDOG genes; Table S6: The main information of four wheat varieties in this study.
DOI: 10.6084/m9.figshare.30230701
title: Genotype data of an isolated Dravidian tribe of South India.

description: The Soliga tribe are indigenous and listed as one of the primitive tribes of the southern regions of India. Their unique and fascinating history is deeply intertwined with their ancestral lands, the Biligiri Rangana Hills of the Mysore region. The Soliga tribe is believed to have inhabited the Biligiri Rangana Hills in the borderlands of Karnataka and Tamil Nadu state. Their presence in this region can be traced back to ancient times, and they are considered one of the original forest-dwelling communities of the Western Ghats.
DOI: 10.6084/m9.figshare.30239920
title: Additional file 2 of Reconstructing the body temperature of extinct marine reptiles

description: Additional file2 (XLSX 12 kb)
DOI: 10.34740/kaggle/dsv/13213597
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.34740/kaggle/dsv/13208657
title: UKMDDoSDN
DOI: 10.7910/dvn/foqbhw
title: University of the Western Cape 2025/2026 Undergraduate Form, Diploma Form Is On Sales! Call Admin Via WhatsApp +27780430015‬ To Apply Contact The Registrar Office Via WhatsApp ‪(+27780430015) ‪(+27780430015) For Guidelines On How To Apply And Register Before Closing Date! Registrar Office Via WhatsApp ‪+27780430015.

description: University of the Western Cape 2025/2026 Undergraduate Form, Diploma Form Is On Sales! Call Admin Via WhatsApp +27780430015‬ To Apply Contact The Registrar Office Via WhatsApp ‪(+27780430015) ‪(+27780430015) For Guidelines On How To Apply And Register Before Closing Date! Registrar Office Via WhatsApp ‪+27780430015.
description: University of the Western Cape 2025/2026 Undergraduate Form, Diploma Form Is On Sales! Call Admin Via WhatsApp +27780430015‬ To Apply Contact The Registrar Office Via WhatsApp ‪(+27780430015) ‪(+27780430015) For Guidelines On How To Apply And Register Before Closing Date! Registrar Office Via WhatsApp ‪+27780430015.
DOI: 10.5281/zenodo.17179170
title: PHaRLAP 3D Ray Tracing Results for 10 MHz Link between Beacon WWV and K2MFF Station on July 1, 2021

description: These 3D HF Radio propagation results were created using the HF propagation toolbox, PHaRLAP, created by Dr Manuel Cervera, Defense Science and Technology Group, Australia (manuel.cervera@dsto.defence.gov.au). This toolbox is available by request from its author. The IRI 2020 Model used to generate these ray tracing results was developed by  Bilitza et al. (2022) at the NASA GSFC Heliospheric Physics Lab.

The Matlab toolbox function `raytrace_3d` was used to generate these two sets of output, "ray_data" and "ray_path_data", distinguished in these filenames by the prefixes "ray_data_N_" and "ray_N_", respectively. The two sets of numbers appended to each filename "AA_BB.mat" refer to the maximum number of ground hops attempted by the PHaRLAP engine (AA), and the UT hour of day for which the simulated ionosphere was generated (BB). "AA" ranges from 1 to 4, and "BB" ranges from 1-24. These data products are saved as matlab `struct` objects, and can be loaded into Matlab directly to reveal the following fields for each data object:

ray_data - lat, lon, ground_range, group_range, phase_path, initial_elev, final_elev, initial_bearing, final_bearing, total_absorption, derivative_absorption, TEC_path, Doppler_shift, apogee, geometric_path_length, frequency, nhops_attempted, ray_label, NRT_elapsed_time

ray_path_data - initial_elev, initial_bearing, frequency, lat, lon, height, group_range, phase_path, refractive index, group_refractive_index, wavenorm_ray_angle, wavenorm_B_angle, polariz_mag, wave_Efield_tilt, volume_polariz_filt, electron_density, geomag_x, geomag_y, geomag_z, geometric_distance, collision_frequency, absorptionAdditional details regarding the contents of each of these fields can be found in PHaRLAP's documentation, available at https://www.dst.defence.gov.au/our-technologies/pharlap-provision-high-frequency-raytracing-laboratory-propagation-studiesThe `raytrace_3d` function was run for a total of 251 rays, each with an initial launch elevation equally spaced between 0° and 50° (stepsize of 0.2°), an initial bearing of 79.6562150173589°, from WWV station in Fort Collins, Colorado (40.67583063°, -105.038933178°) to K2MFF station at the New Jersey Insitute of Technology (40.742018, -74.178975), and a simulated transmission frequency of 10 MHz. This function was called on to simulate a maximum of 1, 2, 3 and 4 ground hops seperately for each hour of July 1, 2021.The IRI 2020 model used to generate these results was initialized at an R12 sunspot number of 57, and was regenerated for the start of each hour of July 1, 2021.
DOI: 10.13140/rg.2.2.16295.61600
title: Dedenko_FLT_Description_old_en.pdf
DOI: 10.15468/dl.vqfj64
title: Occurrence Download

description: A dataset containing 4817 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Oressochen melanopterus",
 "Year 2023-2025"
 ]
}

 The dataset includes 4817 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032318-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17222220
title: Evaluating the Influence of Silicon on Phase Formation,Hardness, and Corrosion in Al–6.5%Mg Alloy

description: This dataset contains the raw and processed data (chemical analysis, hardness measurements, phase analysis, corrosion weight-loss data, and polarization curves) used in the study 'Role of Silicon in Modifying the Microstructure, Hardness, and Corrosion Resistance of Al–6.5Mg Alloys
DOI: 10.5281/zenodo.17222221
title: Evaluating the Influence of Silicon on Phase Formation,Hardness, and Corrosion in Al–6.5%Mg Alloy

description: This dataset contains the raw and processed data (chemical analysis, hardness measurements, phase analysis, corrosion weight-loss data, and polarization curves) used in the study 'Role of Silicon in Modifying the Microstructure, Hardness, and Corrosion Resistance of Al–6.5Mg Alloys
DOI: 10.15468/dl.ngz5zd
title: Occurrence Download

description: A dataset containing 62296 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cynoscion nebulosus",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 62296 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032315-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/oqvmx9
title: University of Johannesburg 2025/2026 Undergraduate Form, Diploma Form Is On Sales! Call Admin Via WhatsApp +27780430015‬ To Apply Contact The Registrar Office Via WhatsApp ‪(+27780430015) ‪(+27780430015) For Guidelines On How To Apply And Register Before Closing Date! Registrar Office Via WhatsApp ‪+27780430015.

description: University of Johannesburg 2025/2026 Undergraduate Form, Diploma Form Is On Sales! Call Admin Via WhatsApp +27780430015‬ To Apply Contact The Registrar Office Via WhatsApp ‪(+27780430015) ‪(+27780430015) For Guidelines On How To Apply And Register Before Closing Date! Registrar Office Via WhatsApp ‪+27780430015.
description: University of Johannesburg 2025/2026 Undergraduate Form, Diploma Form Is On Sales! Call Admin Via WhatsApp +27780430015‬ To Apply Contact The Registrar Office Via WhatsApp ‪(+27780430015) ‪(+27780430015) For Guidelines On How To Apply And Register Before Closing Date! Registrar Office Via WhatsApp ‪+27780430015.
DOI: 10.15468/dl.aygn6e
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diploprion bifasciatum",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032320-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30223501
title: <b>Delgadillo et al, 2025. Dataset_lithonaetes</b>

description: Naturally discontinuous habitats provide a valuable system for studying how geographic isolation, limited gene flow, and environmental heterogeneity influence species' developmental plasticity. We investigated patterns of genomic and phenotypic divergence in the tropical frog <i>Leptodactylus lithonaetes</i>, which is distributed across scattered rocky outcrops along an environmental gradient. We tested three hypotheses: (1) habitat discontinuity restricts gene flow, structuring plastic responses geographically; (2) environmental heterogeneity promotes divergent selection on plasticity based on local environmental conditions; and (3) reduced genetic diversity constrains adaptive plasticity. Across nine populations, we assessed isothermality, temperature, and precipitation seasonality and characterized natural breeding ponds. Using double-digest RAD sequencing, we obtained 11,254 single-nucleotide polymorphisms from 281 individuals across all nine populations. In a common garden experiment, we exposed tadpoles from four populations along the geographical gradient to simulated desiccation risk. Dataset 1 contains survival data from the common garden experiment. Dataset 2 contains data from the metamorphs at the end of the common garden experiment. Dataset 3 contains variables from the larvae during the common garden experiment. Dataset 4 contains data from the ponds characterized in each locality. Dataset 5 is the R Markdown code used to analyze datasets 1, 2, 3, and 4. Dataset 6 includes the R code used to analyze genomic data.