cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19643274
title: Logging intensity effects on genetic diversity, effective population size, spatial genetic structure and gene flow in Araucaria angustifolia (Araucariaceae)

description: <em>Araucaria angustifolia</em> is an endangered species with more than 97% of its natural populations extinct. Logging of the species in the few remaining natural populations is highly restricted, though not readily accepted by farmers and logging companies. Consequently, political pressures have emerged for a return to logging of the species. Assessing the sustainability of such logging requires studies of a range of impacts on the remaining populations, including their genetic viability. We investigated the effect of two logging intensities (LI: 18.4 and 31.9% of trees) on genetic diversity, intrapopulation spatial genetic structure (SGS), effective population size (Ne), and pollen and seed dispersal in three <em>A. angustifolia</em> permanent sample plots (blocks) established in a remnant of Araucaria Forest in Brazil. Microsatellite analysis was performed for all adult and juvenile trees pre- and post-logging seedlings. After selective logging, the greatest loss of alleles and the greatest decrease in Ne were observed from the highest LI. Logging increased SGS, while the distance and patterns of pollen and seed dispersal were different for both pre- and post-logging scenarios, with pollen dispersed over greater distances than seed. Pollen dispersal distance post-logging and seed dispersal distance pre- and post-logging decreased with the increased distance between parents. After logging, Ne reduced from 28.8 (LI= 18.4%) to 30.5% (LI= 31.9%), and some alleles were lost. Under the conditions evaluated in this study, selective logging of <em>A.</em> <em>angustifolia</em> is not adequate. To achieve truly sustainable forest logging, new rules that combine higher minimum DBH, lower logging intensity and longer cutting cycles must be adopted. Furthermore, extensive genetic studies must be performed before logging any individual from a natural population.
DOI: 10.6084/m9.figshare.19643274.v1
title: Logging intensity effects on genetic diversity, effective population size, spatial genetic structure and gene flow in Araucaria angustifolia (Araucariaceae)

description: <em>Araucaria angustifolia</em> is an endangered species with more than 97% of its natural populations extinct. Logging of the species in the few remaining natural populations is highly restricted, though not readily accepted by farmers and logging companies. Consequently, political pressures have emerged for a return to logging of the species. Assessing the sustainability of such logging requires studies of a range of impacts on the remaining populations, including their genetic viability. We investigated the effect of two logging intensities (LI: 18.4 and 31.9% of trees) on genetic diversity, intrapopulation spatial genetic structure (SGS), effective population size (Ne), and pollen and seed dispersal in three <em>A. angustifolia</em> permanent sample plots (blocks) established in a remnant of Araucaria Forest in Brazil. Microsatellite analysis was performed for all adult and juvenile trees pre- and post-logging seedlings. After selective logging, the greatest loss of alleles and the greatest decrease in Ne were observed from the highest LI. Logging increased SGS, while the distance and patterns of pollen and seed dispersal were different for both pre- and post-logging scenarios, with pollen dispersed over greater distances than seed. Pollen dispersal distance post-logging and seed dispersal distance pre- and post-logging decreased with the increased distance between parents. After logging, Ne reduced from 28.8 (LI= 18.4%) to 30.5% (LI= 31.9%), and some alleles were lost. Under the conditions evaluated in this study, selective logging of <em>A.</em> <em>angustifolia</em> is not adequate. To achieve truly sustainable forest logging, new rules that combine higher minimum DBH, lower logging intensity and longer cutting cycles must be adopted. Furthermore, extensive genetic studies must be performed before logging any individual from a natural population.
DOI: 10.6084/m9.figshare.19643283
title: Logging intensity effects on genetic diversity, effective population size, spatial genetic structure and gene flow in Araucaria angustifolia (Araucariaceae)

description: <em>Araucaria angustifolia</em> is an endangered species with more than 97% of its natural populations extinct. Logging of the species in the few remaining natural populations is highly restricted, though not readily accepted by farmers and logging companies. Consequently, political pressures have emerged for a return to logging of the species. Assessing the sustainability of such logging requires studies of a range of impacts on the remaining populations, including their genetic viability. We investigated the effect of two logging intensities (LI: 18.4 and 31.9% of trees) on genetic diversity, intrapopulation spatial genetic structure (SGS), effective population size (Ne), and pollen and seed dispersal in three <em>A. angustifolia</em> permanent sample plots (blocks) established in a remnant of Araucaria Forest in Brazil. Microsatellite analysis was performed for all adult and juvenile trees pre- and post-logging seedlings. After selective logging, the greatest loss of alleles and the greatest decrease in Ne were observed from the highest LI. Logging increased SGS, while the distance and patterns of pollen and seed dispersal were different for both pre- and post-logging scenarios, with pollen dispersed over greater distances than seed. Pollen dispersal distance post-logging and seed dispersal distance pre- and post-logging decreased with the increased distance between parents. After logging, Ne reduced from 28.8 (LI= 18.4%) to 30.5% (LI= 31.9%), and some alleles were lost. Under the conditions evaluated in this study, selective logging of <em>A.</em> <em>angustifolia</em> is not adequate. To achieve truly sustainable forest logging, new rules that combine higher minimum DBH, lower logging intensity and longer cutting cycles must be adopted. Furthermore, extensive genetic studies must be performed before logging any individual from a natural population.
DOI: 10.6084/m9.figshare.19643283.v1
title: Logging intensity effects on genetic diversity, effective population size, spatial genetic structure and gene flow in Araucaria angustifolia (Araucariaceae)

description: <em>Araucaria angustifolia</em> is an endangered species with more than 97% of its natural populations extinct. Logging of the species in the few remaining natural populations is highly restricted, though not readily accepted by farmers and logging companies. Consequently, political pressures have emerged for a return to logging of the species. Assessing the sustainability of such logging requires studies of a range of impacts on the remaining populations, including their genetic viability. We investigated the effect of two logging intensities (LI: 18.4 and 31.9% of trees) on genetic diversity, intrapopulation spatial genetic structure (SGS), effective population size (Ne), and pollen and seed dispersal in three <em>A. angustifolia</em> permanent sample plots (blocks) established in a remnant of Araucaria Forest in Brazil. Microsatellite analysis was performed for all adult and juvenile trees pre- and post-logging seedlings. After selective logging, the greatest loss of alleles and the greatest decrease in Ne were observed from the highest LI. Logging increased SGS, while the distance and patterns of pollen and seed dispersal were different for both pre- and post-logging scenarios, with pollen dispersed over greater distances than seed. Pollen dispersal distance post-logging and seed dispersal distance pre- and post-logging decreased with the increased distance between parents. After logging, Ne reduced from 28.8 (LI= 18.4%) to 30.5% (LI= 31.9%), and some alleles were lost. Under the conditions evaluated in this study, selective logging of <em>A.</em> <em>angustifolia</em> is not adequate. To achieve truly sustainable forest logging, new rules that combine higher minimum DBH, lower logging intensity and longer cutting cycles must be adopted. Furthermore, extensive genetic studies must be performed before logging any individual from a natural population.
DOI: 10.6084/m9.figshare.19589902
title: The 'Regesta' of Nicholas I Dataset

description: This is a selective data set covering 286 entries of Nicholas I's correspondence, with the information and contents translated from the Regesta Imperrii (<em><strong>Die Regesten des Kaiserreiches unter den Karolingern 751-918. Band 4, Papstregesten 800-911, </strong></em><strong>vol. 2/2 ed. Klaus Herbers (Cologne 2012), n.421-870, available online at </strong><strong>http://www.regesta-imperii.de/regesten/1-4-2-papstregesten.html</strong> ). All translations were edited and made using the free translator DeepL (https://www.deepl.com/en/translator). Selections were made on the basis of trying to limit it to Nicholas's most important literal correspondence, and so excluding grants, copies of synods, and gifts etc. Forgeries were also not included. Hopefully the data can be used as a useful tool for producing visualisations and anlaysing his correspondence.
DOI: 10.17632/p7275hth5h.1
title: Mendeley supplemental table 4.

description: Detailed characteristics of post-treatment infections in patients with SJS/TEN following the steroid monotherapy or combination therapy of steroid and etanercept.
DOI: 10.17632/v7kwjxht88.1
title: Mendeley supplemental figure 1.

description: Relationships between serum cytokine levels and clinical courses in SJS/TEN patients treated with the systemic steroid  in combination with etanercept. The correlations between IL-18 or MIP-1α level and acute stage duration (A and C) or time of skin re-epithelialization (B and D) were tested, respectively. Correlation coefficients were determined by Pearson r correlation test in Mendeley supplemental figure 1A, and by Spearman rank correlation test in Mendeley supplemental figures 1B–1D.
DOI: 10.17632/5xsdktsvrk.1
title: Mendeley supplemental table 3.

description: Clinical details of patients with SJS/TEN.
DOI: 10.17632/vb9h6my6kd.1
title: Mendeley supplemental table 2.

description: Demographic characteristics of healthy controls and patients with SJS/TEN.
DOI: 10.17632/mrxyrd5r7y.1
title: Glial-secreted Netrins regulate Robo1/Rac1-Cdc42 signaling threshold levels during Drosophila asymmetric neural stem and progenitor cell division. De Torres-Jurado et al.

description: Figures, original raw data, of the above paper
DOI: 10.25377/sussex.19419539.v1
title: Research data for paper: Elevated amyloid beta disrupts the nanoscale organization and function of synaptic vesicle pools in hippocampal neurons

description: <strong>Data for paper published in Cerebral Cortex on 03/04/22 </strong><br> <br> <strong>Files:</strong> Biasettietal-VPools-TEM (Transmission electron microscope)-maps: TEM-based vesicle pool maps by synapse and condition, used to generate distance plots. Biasettietal-SypHy-fractions: Fluorescence SypHy values used to calculate pool fractions by synapse and condition. Biasettietal-iGluSNFR: iGluSnFR response values by synapse, experiment and condition. Biasettietal-EMdistVtoAZ: Coordinates of each vesicle from TEM images measured as distances to nearest point on the active zone; this is used to generate mean distances for each pool class (PC+: photoconverted, PC-: non-photoconverted) and also to construct cumulative distance plots; measurements were collected for both WT (wild-type) and APPSwe/Ind mice. Biasettietal-iGluSnFRrationale: Background dataset used to establish iGluSnFR protocol used in the paper Biasettietal-abeta-time-conc-rationale: Supporting figure outlining the rationale for time and concentration used in this work. <br> <strong>Abstract</strong> Alzheimer’s disease is linked to increased levels of amyloid beta (Aβ) in the brain, but the mechanisms underlying neuronal dysfunction and neurodegeneration remain enigmatic. Here, we investigate whether organizational characteristics of functional presynaptic vesicle pools, key determinants of information transmission in the central nervous system, are targets for elevated Aβ. Using an optical readout method in cultured hippocampal neurons, we show that acute Aβ42 treatment significantly enlarges the fraction of functional vesicles at individual terminals. We observe the same effect in a chronically elevated Aβ transgenic model (APPSw,Ind) using an ultrastructure-function approach that provides detailed information on nanoscale vesicle pool positioning. Strikingly, elevated Aβ is correlated with excessive accumulation of recycled vesicles near putative endocytic sites, which is consistent with deficits in vesicle retrieval pathways. Using the glutamate reporter, iGluSnFR, we show that there are parallel functional consequences, where ongoing information signaling capacity is constrained. Treatment with levetiracetam, an antiepileptic that dampens synaptic hyperactivity, partially rescues these transmission defects. Our findings implicate organizational and dynamic features of functional vesicle pools as targets in Aβ-driven synaptic impairment, suggesting that interventions to relieve the overloading of vesicle retrieval pathways might have promising therapeutic value.
DOI: 10.25377/sussex.19419539
title: Research data for paper: Elevated amyloid beta disrupts the nanoscale organization and function of synaptic vesicle pools in hippocampal neurons

description: <strong>Data for paper published in Cerebral Cortex on 03/04/22 </strong><br> <br> <strong>Files:</strong> Biasettietal-VPools-TEM (Transmission electron microscope)-maps: TEM-based vesicle pool maps by synapse and condition, used to generate distance plots. Biasettietal-SypHy-fractions: Fluorescence SypHy values used to calculate pool fractions by synapse and condition. Biasettietal-iGluSNFR: iGluSnFR response values by synapse, experiment and condition. Biasettietal-EMdistVtoAZ: Coordinates of each vesicle from TEM images measured as distances to nearest point on the active zone; this is used to generate mean distances for each pool class (PC+: photoconverted, PC-: non-photoconverted) and also to construct cumulative distance plots; measurements were collected for both WT (wild-type) and APPSwe/Ind mice. Biasettietal-iGluSnFRrationale: Background dataset used to establish iGluSnFR protocol used in the paper Biasettietal-abeta-time-conc-rationale: Supporting figure outlining the rationale for time and concentration used in this work. <br> <strong>Abstract</strong> Alzheimer’s disease is linked to increased levels of amyloid beta (Aβ) in the brain, but the mechanisms underlying neuronal dysfunction and neurodegeneration remain enigmatic. Here, we investigate whether organizational characteristics of functional presynaptic vesicle pools, key determinants of information transmission in the central nervous system, are targets for elevated Aβ. Using an optical readout method in cultured hippocampal neurons, we show that acute Aβ42 treatment significantly enlarges the fraction of functional vesicles at individual terminals. We observe the same effect in a chronically elevated Aβ transgenic model (APPSw,Ind) using an ultrastructure-function approach that provides detailed information on nanoscale vesicle pool positioning. Strikingly, elevated Aβ is correlated with excessive accumulation of recycled vesicles near putative endocytic sites, which is consistent with deficits in vesicle retrieval pathways. Using the glutamate reporter, iGluSnFR, we show that there are parallel functional consequences, where ongoing information signaling capacity is constrained. Treatment with levetiracetam, an antiepileptic that dampens synaptic hyperactivity, partially rescues these transmission defects. Our findings implicate organizational and dynamic features of functional vesicle pools as targets in Aβ-driven synaptic impairment, suggesting that interventions to relieve the overloading of vesicle retrieval pathways might have promising therapeutic value.
DOI: 10.17632/sbf9y6pnzm.1
title: Mendeley supplemental table 1.

description: The criteria of the severity-of-illness score of toxic epidermal necrolysis (SCORTEN) for Stevens-Johnson syndrome/toxic epidermal necrolysis (SJS/TEN).
DOI: 10.17632/8ysxtyf8p2.7
title: RecBov51c

description: Image Dataset with 51 classes the Pantaneiro Cattle.
The images in the dataset were collected between 1:50pm and 4:48pm on January 25, 2019 at the Aquidauana Pantanal Cattle Conservation Center (NUBOPAN) in the State University of Mato Grosso do Sul/Aquidauana University Unit (UEMS/UUA). This is located in the municipality of Aquidauan/MS which is in the Pantanal region of Mato Grosso do Sul. The geographical coordinates were as follows: latitude 20º28' S, longitude 55º48' W and an altitude of 149 meters.
In this study, 51 Pantanal cattle units of both sexes and various ages were used. This is equivalent to 10% of the existing population for this breed. Images were collected using the Digital Video Recorder (DVR) set MIDI MD-1004NS MD-DVR41. The image quality was AHD 720p and the recording capacity was 1Tb. Four cameras were positioned at the exit outlet to collect images of the back, profile, side, and face. Images of the cattle’s backs were collected using camera 1. This was positioned approximately 2.5 meters high with an inclination angle of 30º. The other cameras were positioned according to the sketch at the same height as the pickets.
The videos collected were stored in the DVR, transferred to computers, analyzed, and divided into 212 smaller videos. Images of the cattle were then extracted from these videos. The dataset was formed using 27,849 images of Pantanal cattle and the number of images obtained varied according to filming to time of each cattle.
DOI: 10.6084/m9.figshare.19643325
title: Dataset of Questionnaire Result from the respondents of Penta-helix model of e-government in combatting corruption

description: Dataset of Questionnaire Result from the respondents of Penta-helix model of e-government in combatting corruption
DOI: 10.6084/m9.figshare.19643325.v1
title: Dataset of Questionnaire Result from the respondents of Penta-helix model of e-government in combatting corruption

description: Dataset of Questionnaire Result from the respondents of Penta-helix model of e-government in combatting corruption
DOI: 10.7925/drs1.duchas_5177690
title: Many years ago there lived at Foxe's Bridge, Courtbrack, Co. Cork, a labouring man with his wife and two children who were very young.

description: Story collected by D. O Driscoll, a student at Berrings (Measctha) school (Berrings, Co. Cork) from informant Michael Murphy.
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Domhnall Ó Drisceoil.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5177691
title: Riddles

description: Story collected by a student at (Ní fios) school (Kilshannig, Co. Cork) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher (Ní fios).
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5177693
title: The Teacher v the Farmer - For the Hand of a Maiden

description: Story collected by Díarmuid Ó Múimhneacháin, a student at Cnoc na Groighe (B.), Ráth Mhór school (Knocknagree, Co. Cork) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Díarmuid Ó Muimhneacháin.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5177694
title: Ceann Eile a Thug Sean-Bhrighid Dom

description: Story collected by Díarmuid Ó Múimhneacháin, a student at Cnoc na Groighe (B.), Ráth Mhór school (Knocknagree, Co. Cork) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Díarmuid Ó Muimhneacháin.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5177695
title: Agus Ceann Eile Fós ó Bhrighid

description: Story collected by Díarmuid Ó Múimhneacháin, a student at Cnoc na Groighe (B.), Ráth Mhór school (Knocknagree, Co. Cork) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Díarmuid Ó Muimhneacháin.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5177696
title: Considering that her late husband Patsy Sheehan was born in 1841 I tried to get some of his tales of the famine and after from Mrs Sheehan and both she and Jeremiah gave me the following.

description: Story collected by Díarmuid Ó Múimhneacháin, a student at Cnoc na Groighe (B.), Ráth Mhór school (Knocknagree, Co. Cork) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Díarmuid Ó Muimhneacháin.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5177697
title: Scéal - An Fear agus na Púcaí

description: Story collected by Máire Ní Mhuirghthe, a student at Baile Mhúirne (C.) school (Ballyvourney, Co. Cork) from informant Máire Bean Uí Mhuirighthe.
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Eibhlín, Bean Uí Bhuachalla.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5177698
title: Story of a Great Walker

description: Story collected by a student at (Ní fios) school (Kilshannig, Co. Cork) from informant James Flynn.
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher (Ní fios).
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5177699
title: Weather-Lore

description: Story collected by a student at (Ní fios) school (Kilshannig, Co. Cork) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher (Ní fios).
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.