cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7387261
title: DWUG EN: Diachronic Word Usage Graphs for English

description: This data collection contains diachronic Word Usage Graphs (WUGs) for English. Find a description of the data format, code to process the data and further datasets on the WUGsite.


See previous versions for additional testsets.


Please find more information on the provided data in the paper referenced below.


Version: 2.0.1, 30.11.2022. Assigns noise uses the cluster label '-1' instead of removing them. Important: Version 2.0.0 extends previous versions with one more annotation round and new clusterings.


Reference


Dominik Schlechtweg, Nina Tahmasebi, Simon Hengchen, Haim Dubossarsky, Barbara McGillivray. 2021. DWUG: A large Resource of Diachronic Word Usage Graphs in Four Languages. Proceedings of the 2021 Conference on Empirical Methods in Natural Language Processing.
description: Assigns noise uses the cluster label '-1' instead of removing them. Important: Version 2.0.0 extends previous versions with one more annotation round and new clusterings.

Republication and redistribution is prohibited.
DOI: 10.6084/m9.figshare.28408877
title: <b>RNA-Seq of Bos taurus:adult male</b>

description: Twelve Huaxi cattle with the highest LMA (loin eye muscle, H-LMA) and the lowest LMA (L-LMA) were selected for transcriptome analysis to identify candidate genes regulating the LMA trait.At the time of slaughter, Samples of the left longissimus dorsi muscle from all male individuals were collected and placed into 5 mL freezing tubes, which were immediately frozen in liquid nitrogen and subsequently transferred to a liquid nitrogen tank for long-term storage. These samples will be used for transcriptome sequencing. Illumina NovaSeq 6000 paired end sequencing for LD muscle.
DOI: 10.15468/dl.5wtt55
title: Occurrence Download

description: A dataset containing 3863781 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OrderKey is Odonata",
 "Country is one of (Norway, Guernsey, Poland, Denmark, Kosovo, Latvia, France, Slovakia, Romania, Bulgaria, Croatia, Iceland, Ireland, Malta, Åland Islands, North Macedonia, Andorra, Montenegro, Germany, Belarus, Czechia, United Kingdom of Great Britain and Northern Ireland, Switzerland, Belgium, Gibraltar, Portugal, Monaco, Ukraine, Finland, Bosnia and Herzegovina, Hungary, Estonia, Greece, Serbia, Netherlands, Moldova, Republic of, Cyprus, Isle of Man, Lithuania, Slovenia, Albania, Sweden, Liechtenstein, Austria, Italy, Luxembourg, Spain, Jersey)",
 "HasCoordinate is TRUE",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "BasisOfRecord is one of (Living Specimen, Observation, Human Observation, Machine Observation, Occurrence evidence)"
 ]
}

 The dataset includes 3863781 records from 1384 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000204-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.snunqm
title: Occurrence Download

description: A dataset containing 16867 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "MediaType is Image",
 "PublishingOrg is one of (c8d737e0-2ff8-42e8-b8fc-6b805d26fc5f, 28eb1a3f-1c15-4a95-931a-4af90ecb574d, bb646dff-a905-4403-a49b-6d378c2cf0d9)",
 "TaxonKey is Roeseliana roeselii (Hagenbach, 1822)"
 ]
}

 The dataset includes 16867 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000237-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mbjruw
title: Occurrence Download

description: A dataset containing 3434057 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((38.000 85.000, -27.000 85.000, -27.000 56.000, 38.000 56.000, 38.000 85.000))",
 "Year 1960-1969"
 ]
}

 The dataset includes 3434057 records from 849 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000212-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7y418d
title: Occurrence Download

description: A dataset containing 128215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 128215 records from 178 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015475-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.thjpdn
title: Occurrence Download

description: A dataset containing 1916 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Plant Species Sampled in Some Selected Forest Reserves in the High Forest Zone of Ghana"
 ]
}

 The dataset includes 1916 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011422-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqmzvi
title: Occurrence Download

description: A dataset containing 718 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thamnomanes caesius glaucus Cabanis, 1847"
 ]
}

 The dataset includes 718 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013686-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fhuf6h
title: Occurrence Download

description: A dataset containing 594 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helarctos malayanus (Raffles, 1822)"
 ]
}

 The dataset includes 594 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015522-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.711sga
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Canada",
 "TaxonKey is Ursus arctos Linnaeus, 1758"
 ]
}

 The dataset includes 56 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011423-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11402691
title: Machine Learning Tools for Peptide Bioactivity Evaluation Implications for Cell Culture Media Optimization and the Broader Cultivated Meat Industry
DOI: 10.6084/m9.figshare.25967731
title: genome.gtf

description: Genome annotation file of Argyrosomus japonicus
DOI: 10.15468/dl.b8fxqx
title: Occurrence Download

description: A dataset containing 183559 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Echinochloa P.Beauv."
 ]
}

 The dataset includes 183559 records from 878 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015477-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.216ikc
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Orthotomicus caelatus Wood & Bright, 1992"
 ]
}

 The dataset includes 69 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013687-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pszm05
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sphenomorphus maculicollus Bacon, 1967"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011423-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jbskvm
title: Occurrence Download

description: A dataset containing 9914 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidochelys olivacea (Eschscholtz, 1829)"
 ]
}

 The dataset includes 9914 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018920-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nuwsvq
title: Occurrence Download

description: A dataset containing 1005257 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "DatasetKey is Observation.org, Nature data from around the World",
 "Year 2000-2021"
 ]
}

 The dataset includes 1005257 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068892-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7j6xcg
title: Occurrence Download

description: A dataset containing 249 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Tanzania, United Republic of",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aepyceros melampus (Lichtenstein, 1812)",
 "Year 2000-2015"
 ]
}

 The dataset includes 249 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068890-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gvm3xm
title: Occurrence Download

description: A dataset containing 388 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Orthotomicus proximus (Eichhoff, 1867) Eichhoff, 1867"
 ]
}

 The dataset includes 388 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013688-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.skfrlm
title: Occurrence Download

description: A dataset containing 681 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pachystroma longifolium (Nees) I.M.Johnst."
 ]
}

 The dataset includes 681 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002252-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4025t3
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Akodon dayi Osgood, 1916"
 ]
}

 The dataset includes 205 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013689-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.he3bhm
title: Occurrence Download

description: A dataset containing 11873 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crotalus atrox Baird & Girard, 1853"
 ]
}

 The dataset includes 11873 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011423-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xzdgfg
title: Occurrence Download

description: A dataset containing 43759 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Material citation",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Occurrence evidence"
 ]
 },
 "Country is Bahamas",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 43759 records from 135 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0414462-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nay7u6
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thamnomanes saturninus huallagae (Cory, 1916)"
 ]
}

 The dataset includes 78 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013689-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3a7cu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.439122 -34.397189, 148.439122 -34.401681, 148.443613 -34.401681, 148.443613 -34.397189, 148.439122 -34.397189))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071115-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26718558
title: Additional file 6 of A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea

description: Additional file 6.
DOI: 10.6084/m9.figshare.26718552.v1
title: Additional file 4 of A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea

description: Additional file 4.
DOI: 10.6084/m9.figshare.26720766
title: Additional file 3 of MR-GGI: accurate inference of gene–gene interactions using Mendelian randomization

description: Additional file 3. Data 1. Biological process of Gene Ontology terms for cluster 1 in yeast GRN
DOI: 10.6084/m9.figshare.26721999.v1
title: Additional file 5 of Comparative 3D genome analysis between neural retina and retinal pigment epithelium reveals differential cis-regulatory interactions at retinal disease loci

description: Additional file 5. BEDPE file with Hi-C loops in neural retina.
DOI: 10.6084/m9.figshare.26718558.v1
title: Additional file 6 of A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea

description: Additional file 6.
DOI: 10.6084/m9.figshare.26718570
title: Additional file 10 of A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea

description: Additional file 10.
DOI: 10.6084/m9.figshare.26720781
title: Additional file 8 of MR-GGI: accurate inference of gene–gene interactions using Mendelian randomization

description: Additional file 8. Data 6. Biological process of Gene Ontology terms for cluster 6 in yeast GRN
DOI: 10.6084/m9.figshare.26722002
title: Additional file 6 of Comparative 3D genome analysis between neural retina and retinal pigment epithelium reveals differential cis-regulatory interactions at retinal disease loci

description: Additional file 6. BEDPE file with Hi-C loops in RPE/choroid.
DOI: 10.6084/m9.figshare.26722005.v1
title: Additional file 7 of Comparative 3D genome analysis between neural retina and retinal pigment epithelium reveals differential cis-regulatory interactions at retinal disease loci

description: Additional file 7. BEDPE file with differential Hi-C loops gained in neural retina.
DOI: 10.15468/dl.2uxtuk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.865823 -34.397189, 148.865823 -34.399435, 148.868069 -34.399435, 148.868069 -34.397189, 148.865823 -34.397189))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071116-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26718564
title: Additional file 8 of A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea

description: Additional file 8.
DOI: 10.6084/m9.figshare.26718567.v1
title: Additional file 9 of A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea

description: Additional file 9.
DOI: 10.15468/dl.q6wm4p
title: Occurrence Download

description: A dataset containing 400483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-07-22",
 "EventDate is less than or equal to 2024-08-21",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 400483 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071103-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26722008.v1
title: Additional file 8 of Comparative 3D genome analysis between neural retina and retinal pigment epithelium reveals differential cis-regulatory interactions at retinal disease loci

description: Additional file 8. BEDPE file with differential Hi-C loops gained in RPE/choroid.
DOI: 10.6084/m9.figshare.26718576.v1
title: Additional file 12 of A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea

description: Additional file 12.
DOI: 10.6084/m9.figshare.26722008
title: Additional file 8 of Comparative 3D genome analysis between neural retina and retinal pigment epithelium reveals differential cis-regulatory interactions at retinal disease loci

description: Additional file 8. BEDPE file with differential Hi-C loops gained in RPE/choroid.
DOI: 10.6084/m9.figshare.26718720.v1
title: Additional file 1 of Bacteria colonization and gene expression related to immune function in colon mucosa is associated with growth in neonatal calves regardless of live yeast supplementation

description: Additional file 1: Table S1. Primer sequences for bacterial targets in biopsy samples; Table S2. Relative abundance of bacteria in the colon mucosa of each calf and d at the phylum level; Table S3. Relative abundance of bacteria in the colon mucosa of each calf and d at the genus level; Table S4. List of raw reads of the expressed gene in each calf; Table S5. List of commonly expressed genes among D0 CON, D0 SCB, D5 CON, and D5 SCB; Table S6. List of uniquely expressed genes in D0 CON; Table S7. List of uniquely expressed genes in D0 SCB; Table S8. List of uniquely expressed genes in D5 CON; Table S9. List of uniquely expressed genes in D5 SCB; Table S10. List of DE genes between D0 and D5; Table S11. List of genes in gene modules which correlated with absolute abundance of colon mucosa-attached bacteria.
DOI: 10.15468/dl.dv6she
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.888281 -34.397189, 148.890527 -34.397189, 148.890527 -34.392698, 148.888281 -34.392698, 148.888281 -34.397189)), ((148.888281 -34.397189, 148.88379 -34.397189, 148.88379 -34.399435, 148.888281 -34.399435, 148.888281 -34.397189)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071118-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26718942
title: Additional file 7 of Identification of DNA methylation characteristics associated with metastasis and prognosis in colorectal cancer

description: Supplementary Material 7.
DOI: 10.6084/m9.figshare.26718882
title: Additional file 1 of Development, validation and application of single molecule molecular inversion probe based novel integrated genetic screening method for 29 common lysosomal storage disorders in India

description: Additional file 1. List of study sites and recruited patients.
DOI: 10.6084/m9.figshare.26718933.v1
title: Additional file 4 of Identification of DNA methylation characteristics associated with metastasis and prognosis in colorectal cancer

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.26719203.v1
title: Additional file 2 of A multilevel investigation to reveal the regulatory mechanism of lignin accumulation in juice sac granulation of pomelo

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26718900
title: Additional file 7 of Development, validation and application of single molecule molecular inversion probe based novel integrated genetic screening method for 29 common lysosomal storage disorders in India

description: Additional file 7. Coverage data of 903 probes using Dried Blood Spot (DBS) extracted DNA and Manual blood extracted DNA in smMIP-NGS assay.
DOI: 10.15468/dl.uccjkg
title: Occurrence Download

description: A dataset containing 12782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Solenopsis geminata (Fabricius, 1804)"
 ]
}

 The dataset includes 12782 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071117-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26719155
title: Additional file 3 of The MYB family and their response to abiotic stress in ginger (Zingiber officinale Roscoe)

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.26722527.v1
title: Additional file 4 of A longer time to relapse is associated with a larger increase in differences between paired primary and recurrent IDH wild-type glioblastomas at both the transcriptomic and genomic levels

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.26719170
title: Additional file 8 of The MYB family and their response to abiotic stress in ginger (Zingiber officinale Roscoe)

description: Supplementary Material 8.