cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18738/t8/dzcv8b
title: Biogeochemistry of phytoplankton RuBisCO in the ocean

description: Ribulose-1,5-bisphosphate oxygenase/carboxylase (RuBisCO) is the most abundant enzyme on Earth, playing a key role in carbon fixation during oxygenic photosynthesis. Form I RuBisCO is found in marine photosynthesizers and land plants. There are different Types of Form I RuBisCO, which vary in amino acid length and composition. The objective of this research was to determine the amounts of elemental resources (C, N, S) associated with the different Types of RuBisCO found in marine phytoplankton. This was achieved by converting published protein sequence data (from UniProt KB) into elemental data for the large and small subunit proteins in RuBisCO. The results of these calculations are presented in this database for the large subunit (L), small subunit (S), and L8S8 holoenzyme of RuBisCO for marine photosynthetic organisms and representative land plants.
DOI: 10.6084/m9.figshare.30053380
title: HkMCMD Introductory Article Data

description: Data to accompany the introductory article for the Hybrid kinetic Monte Carlo/Molecular Dynamics (HkMCMD) algorithm.
DOI: 10.6084/m9.figshare.30053380.v1
title: HkMCMD Introductory Article Data

description: Data to accompany the introductory article for the Hybrid kinetic Monte Carlo/Molecular Dynamics (HkMCMD) algorithm.
DOI: 10.15468/dl.z2p3qe
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Andropogon lima",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 48 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026535-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ha6ymw
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arborophila mandellii",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 16 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026536-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fret4a
title: Occurrence Download

description: A dataset containing 1646 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heleia squamifrons",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1646 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026537-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b338mz
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Erigeron major"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026538-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6hfhk3
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Kenya",
 "OccurrenceStatus is Present",
 "TaxonKey is Eretmochelys imbricata"
 ]
}

 The dataset includes 111 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026539-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/sejp1b
title: Food quality decision tree based on collective know-how (Capex ontology)

description: Agri-food chain processes are based on a multitude of knowledge, know-how and experiences forged over time. Improving food quality must go through the sharing of collective expertise. In this dataset, we provide files associated with the design and implementation of a comprehensive methodology to create a knowledge base integrating the collective expertise and use it to recommend technical actions to be taken to improve food quality. We propose an original core ontology expressed with the international languages of the Semantic Web to represent, on the one hand, knowledge in the form of decision trees representing potential causal relations between situations of interest and, on the other hand, recommendations in terms of technological actions to manage them. An example of decision tree is provided: Excessive salting in mind mapping format and RDF format. An additional Excel file contains data used to assess the relevance of the technical action's efficiency indicator.
DOI: 10.5281/zenodo.17055486
title: Appendix 1  Evidence base for Guy Healy Chapter, Short Series of Europe: a subcultural circuit of popular and critically acclaimed filmmaking, 1998-2024, in Streaming Europe

description: In terms of methodology, to map European short series of popular and critical acclaim, I established a new database (Appendix 1) using the rankings of the Web Series World Cup (WSWC), Bassaget & Burkholder’s Short, narrative & serialized (2019) book, interviews with festival directors, festival archives, theatrical release posters, and the IMDb and Filmfreeway databases. Crucially, so many web-series used YouTube to break-out their first seasons, their public-facing channel information proved indispensable.
DOI: 10.5281/zenodo.17055487
title: Appendix 1  Evidence base for Guy Healy Chapter, Short Series of Europe: a subcultural circuit of popular and critically acclaimed filmmaking, 1998-2024, in Streaming Europe

description: In terms of methodology, to map European short series of popular and critical acclaim, I established a new database (Appendix 1) using the rankings of the Web Series World Cup (WSWC), Bassaget & Burkholder’s Short, narrative & serialized (2019) book, interviews with festival directors, festival archives, theatrical release posters, and the IMDb and Filmfreeway databases. Crucially, so many web-series used YouTube to break-out their first seasons, their public-facing channel information proved indispensable.
DOI: 10.15468/dl.97xmaf
title: Occurrence Download

description: A dataset containing 337 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cerastium semidecandrum",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 337 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026541-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15870648
title: Supplementary files for Permeability of the Pāpaku Fault within the Hikurangi Subduction Zone Determined from the Thermal Response to a Free Flowing Well Test

description: The data and software presented here include temperature recorded along the Te-Matakite, U1518 seafloor observatory used to estimate the flow rate uphole and the permeability of the Papaku Fault Zone along the Hikurangi Subduction Zone, New Zealand.
DOI: 10.5281/zenodo.17038282
title: Supplementary files for Permeability of the Pāpaku Fault within the Hikurangi Subduction Zone Determined from the Thermal Response to a Free Flowing Well Test

description: The data and software presented here include temperature recorded along the Te-Matakite, U1518 seafloor observatory used to estimate the flow rate uphole and the permeability of the Papaku Fault Zone along the Hikurangi Subduction Zone, New Zealand.
DOI: 10.15468/dl.dhuuzq
title: Occurrence Download

description: A dataset containing 2156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amphibia",
 "Geometry POLYGON ((44.5146 10.8961, 44.3186 11.0599, 37.1382 11.0599, 37.1382 2.0599, 46.1382 2.0599, 46.1382 11.0599, 45.0861 11.0599, 44.7982 10.9157, 44.5146 10.8961))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)"
 ]
}

 The dataset includes 2156 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026542-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7h3nay
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Jardín Botánico de Córdoba: Herbarium COA",
 "TaxonKey is Erigeron major"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026543-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y9ck6j
title: Occurrence Download

description: A dataset containing 5263 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Byrsonima coccolobifolia"
 ]
}

 The dataset includes 5263 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026544-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wngv5f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is "
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026546-250827131500795/datasets/export for details.
DOI: 10.15468/dl.z2jmp4
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gomphonitzschia ungeri, Navicula microlyra, Navicula vandamii, Navicula viridula, Mastogloia, Cymbella aspera, Cymbella kappii, Fallacia umpatica, Kolbesia ploenensis, Karayevia ploenensis, Achnanthidium crassum, Fallacia, Navicula umpatica, Anabaena cylindrica, Asterococcus, Caloneis schumanniana, Characiochloris, Chroococcus dispersus, Chrysolepidomonas, Cosmocladium, Dictyococcus, Goniochloris, Granulocystopsis, Koliella, Lagynion, Microspora amoena, Nitzschia acidoclinata, Nitzschia umbonata, Scotiellopsis, Teilingia, Trochiscia, Volvox, Achnanthes ploenensis, Botrydiopsis, Achnanthes inflata, Achnanthes rupestris, Amphora montana, Diadesmis contenta, Nitzschia intermedia, Nitzschia palea, Nitzschia reversa, Psammothidium oblongellum, Tryblionella debilis, Achnanthes brevipes, Amphipleura, Amphipleura pellucida, Chamaepinnularia, Craticula accomodiformis, Craticula halophilioides, Cyclotella cryptica, Cymbella turgida, Cymbella zambesiana, Encyonema caespitosum, Encyonopsis buedelii, Encyonopsis microcephala, Fallacia pygmaea, Mastogloia elliptica, Navicula agnewii, Navicula canalis, Navicula exilis, Navicula gerloffii, Navicula reinhardtii, Navicula simplex, Neidium productum, Nitzschia draveillensis, Nitzschia frequens, Nitzschia paleaeformis, Nitzschia perspicua, Nitzschia pumila, Nitzschia radicula, Nitzschia solita, Nitzschia spiculum, Nitzschia subsalsa, Pinnularia microstauron, Stephanodiscus minutulus, Tryblionella littoralis, Tryblionella littoralis, Navicula accommoda, Diploneis smithi, Nitzschia littoralis, Diploneis smithii, Anomoeoneis sphaerophora, Cyclostephanos invisitatus, Stephanodiscus invisitatus, Cyclotella atomus, Denticula kuetzingii, Encyonema volkii, Cymbella volkii, Fallacia tenera, Navicula tenera, Luticola mutica, Navicula microcari, Navicula subrhynchocephala, Nitzschia agnita, Nitzschia elegantula, Nitzschia fonticola)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((18.2339 -32.5266,18.1411 -32.657,18.1007 -32.7021,18.0224 -32.6366,17.8923 -32.6419,17.754 -32.8255,17.7723 -32.9007,20.509 -32.9007,20.509 -28.5786,16.2782 -28.5786,16.4358 -28.7202,16.726 -29.1235,17.1957 -30.3752,17.6655 -31.1743,18.1322 -31.7679,18.2495 -32.2638,18.2339 -32.5266))"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026545-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17054997
title: Water-Guided Docking Improves Prediction of Protein–Glycan Complexes - Supporting Information (Review Only)

description: Lannot et al. (2025): Water-Guided Docking Improves Prediction of Protein–Glycan Complexes - Supporting Information (Review Only)The available dataset is organized into 30 systems, each identified under the nomenclature HoloID_ApoID. Within each system folder, the basic input files required to perform the docking runs are provided, with intuitive filenames for ease of use:





reference_ligand.pdbqt: the ligand prepared in AutoDock-compatible .pdbqt format, on the reference pose from the holo complex




randomized_ligand.pdbqt: the ligand prepared in AutoDock-compatible .pdbqt format, on a randomized pose




holo_receptor.pdbqt: the holo conformation of the receptor, prepared and saved in .pdbqt format.




apo_receptor.pdbqt: the apo conformation of the receptor, structurally aligned to its holo counterpart, prepared and saved in .pdbqt format.




af3_receptor.pdbqt: the AlphaFold3-predicted conformation of the receptor, structurally aligned to the holo receptor and prepared in .pdbqt format.




config_file.conf: the configuration file containing the input parameters required to perform docking runs with ADV and the derivative versions of the software used in this study.



In addition, for selected representative systems, a sites.conf file is included. This file defines the WII sites employed in the WIIGA protocol, enabling reproducibility of the guided docking experiments. Representative systems were chosen based on ligand size and include the following:





4LBN_3ZSM – tetrasaccharide




3ACI_3ACF – pentasaccharide




5XUL_5XTJ – hexasaccharide




1DMB_1JW4 – heptasaccharide




3INA_3IMN – octasaccharide




7NOX_7O8C – nonasaccharide
DOI: 10.15468/dl.zz5ajx
title: Occurrence Download

description: A dataset containing 534090605 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 534090605 records from 18292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026462-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c4gwwx
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Salvia azurea"
 ]
}

 The dataset includes 55 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012261-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48420/30619199
title: TPI MCA Productivity Scorecards and Dashboards 2025

description: This dataset includes scorecards for all Mayoral Combined Authorities (MCA) in the United Kingdom. These scorecards indicate how well each MCA area is performing compared to the UK for a broad set of indicators, including productivity performance and drivers of productivity according to the categories: Business Performance; Skills & Training; Health & Wellbeing; and Investment, infrastructure & Connectivity.Find our blog here going over the data in more detail: https://lab.productivity.ac.uk/insights/2025-edition-of-the-mca-productivity-scorecards-dashboards<b>The corresponding dashboards are linked below</b>The MCA Productivity Scorecards and Dashboards package include:The Sources of Data and Methods background documentThe dataset behind the scorecards and dashboards17 Scorecards including:A Scorecard comparing all MCA Regions against the United KingdomGreater LondonCambridgeshire and PeterboroughWest of EnglandYork and North YorkshireGreater ManchesterLiverpool City RegionEast MidlandsWest MidlandsNorth EastTees ValleySouth YorkshireWest YorkshireDevon and TorbayGreater LincolnshireHull and East YorkshireLancashire<br>
DOI: 10.48420/30619199.v1
title: TPI MCA Productivity Scorecards and Dashboards 2025

description: This dataset includes scorecards for all Mayoral Combined Authorities (MCA) in the United Kingdom. These scorecards indicate how well each MCA area is performing compared to the UK for a broad set of indicators, including productivity performance and drivers of productivity according to the categories: Business Performance; Skills & Training; Health & Wellbeing; and Investment, infrastructure & Connectivity.Find our blog here going over the data in more detail: https://lab.productivity.ac.uk/insights/2025-edition-of-the-mca-productivity-scorecards-dashboards<b>The corresponding dashboards are linked below</b>The MCA Productivity Scorecards and Dashboards package include:The Sources of Data and Methods background documentThe dataset behind the scorecards and dashboards17 Scorecards including:A Scorecard comparing all MCA Regions against the United KingdomGreater LondonCambridgeshire and PeterboroughWest of EnglandYork and North YorkshireGreater ManchesterLiverpool City RegionEast MidlandsWest MidlandsNorth EastTees ValleySouth YorkshireWest YorkshireDevon and TorbayGreater LincolnshireHull and East YorkshireLancashire<br>
DOI: 10.15468/dl.9uq6ue
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "Geometry POLYGON ((-119.7974 35.23712, -119.7857 35.2393, -119.7897 35.24564, -119.8004 35.2427, -119.7974 35.23712))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012263-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48328/tudatalib-2033
title: ΦΩΣ 4D Sensitivity study Ostia

description: Geometric models, simulation data, scripts and results of a sensitivity study conducted with room 4 in the Casa delle Ierodule (House of Lucceia Primitiva, Ostia III, ix, 6) within the Case a Giardino (Garden houses) in the ancient city and archaeological site Ostia Antica, Italy. Data Basis: Parco Archeologico di Ostia Antica und ÖAI, FWF P31 438-G25
DOI: 10.5281/zenodo.17737383
title: Data used for the training and evaluation process of the ML model presented in "Machine Learning-based resolution of strategic conflicts in U-space airspaces"

description: This repository contains the datasets used to evaluate and validate a machine learning–based conflict detection and resolution framework for UAV traffic operating in a realistic PX4-based simulation environment. The data include both real-world-inspired operational scenarios and synthetic grids generated exclusively for model training. Together, these files provide the full context required to reproduce the experimental setup, evaluate model performance, and compare scenarios across different environments.

table_cells.csv and times.csv contain information about the real environment, which are the scenarios simulated by the PX4 realistic simulator. The first contains the cells that have been created in this area and the second contains the cells that have been occupied, and at what time they are occupied. This are the environments where the ML tool is evaluated.

real_grids_21x28x194_n5.npy are the grids that have been created only for the ML training process. 

ois.json are the operational intents of the flights that have been rejected by the Flight Authorisation Service (FAS). This is the data that has been used for the evaluation of the model.
DOI: 10.15468/dl.kq2mpy
title: Occurrence Download

description: A dataset containing 3391 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Japan",
 "TaxonKey is Popillia japonica"
 ]
}

 The dataset includes 3391 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012264-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17398233
title: Entanglement and fluctuations of the fractonic phases in a one-dimensional dipole-conserving Bose-Hubbard chain (2025)
DOI: 10.5281/zenodo.17398234
title: Entanglement and fluctuations of the fractonic phases in a one-dimensional dipole-conserving Bose-Hubbard chain (2025)
DOI: 10.15468/dl.h4f8ar
title: Occurrence Download

description: A dataset containing 1432181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Canis lupus, Cuon alpinus, Felis chaus, Gazella subgutturosa, Hylobates pileatus, Lynx lynx, Macaca arctoides, Panthera leo, Panthera pardus, Panthera tigris, Ursus arctos, Arctictis binturong, Sus scrofa, Cervus nippon, Capra sibirica, Felis lybica, Prionailurus bengalensis)",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 1432181 records from 3359 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012232-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.duygwv
title: Occurrence Download

description: A dataset containing 1497 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Phrynosoma modestum Girard, 1852",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1497 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008748-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffh2yx
title: Occurrence Download

description: A dataset containing 845 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-5000.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Setaria geniculata P.Beauv."
 ]
}

 The dataset includes 845 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034373-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.