cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25909/5cb523d6c6e52
title: Data for: Heterochronic shifts mediate ecomorphological convergence in skull shape of microcephalic sea snakes

description: Datafiles for the analyses of the paper "Heterochronic shifts mediate ecomorphological convergence in skull shape of microcephalic sea snakes" published in Integrative & Comparative Biology 2019.<br>Landmark coordinate data = Sea Snake Lmk coords 60.tpsPaired lmks for bilateral symmetry = land pairs 60.csvClassifier file for species epithets = species classifier.csvAnalysis script in R = Sea snake micro skull shape.R<br>
DOI: 10.25909/5cc11894b0cc2
title: Final 16S rRNA gene bait design

description: Final 16S rRNA gene bait design.<br>Arbor Biosciences.<br><br>
DOI: 10.25909/5cd27304e5cf9
title: Appendix 5.5

description: Database used in Itremo Chapter<br>
DOI: 10.25909/5ccd57df23fe0
title: Archaea restoration raw OTU data

description: OTU dataset of Archaea 16S ribosomal RNA from across an ecological restoration chronosequence from Mt Lofty Ranges, South Australia
DOI: 10.25909/5cd0e267156b1
title: Data inputs - Characterising the soil fungi microbiome in metropolitan green spaces across a vegetation biodiversity gradient

description: Sequence ASVs reads for article titled: 'Characterising the soil fungi microbiome in metropolitan green spaces across a vegetation biodiversity gradient' ...
DOI: 10.25909/5cd24a8e6f896
title: Original data supporting results in the paper: Steggles EK, Facelli JM, Ainsley PJ and Pound LM (2019 in print) Biological soil crust and vascular plant interactions in Western Myall (Acacia papyrocarpa) open woodland in South Australia" Journal of Vegetation Science

description: Original data supporting results in the paper:<br><br>Emma K. Steggles, José M. Facelli, Phillip J. Ainsley and Leanne M. Pound (2019 in print) <i>Biological soil crust and vascular plant interactions in Western Myall (Acacia papyrocarpa) open woodland in South Australia.</i> Journal of Vegetation Science.
DOI: 10.25909/8206850
title: Data and code for: Carbonservation with demonstrated biodiversity and carbon gains: Carbon can pay but biodiversity must lead

description: Data were generated using the FullCAM carbon accounting model, version 4.0.3.26. <br>http://www.environment.gov.au/climate-change/climate-science-data/greenhouse-gas-measurement/land-sector<br>Richards, G. P. & Evans, D. M. W. Development of a carbon accounting model (FullCAM Vers. 1.0) for the Australian continent. Australian Forestry 67, 277-283, doi:10.1080/00049158.2004.10674947 (2004).These data were used to model carbon sequestration from restoration of temperate woodland in the eastern Mt Lofty Ranges South Australia. R code used to analyze the data are also included.The methodology for this dataset is outlined in the article "Bond AJ, O'Connor PJ, Cavagnaro, TR () Carbon can pay the way for biodiversity conservation"The files are named firstly with the numbers 1-12 to identify study site. The next part of the file name identifies the scenario modeled with 1, 2, 3 indicating vegetation age (last wildfire or clearance in 1983, 1955, 1939 respectively) and a,b,c indicating degradation rate as a proportion of standard growth rate (0.75,0.5,0.25 respectively) and the final part of the file name c indicating the presence of modeled vegetation recovery.<br>
DOI: 10.25909/8206850.v1
title: Data and code for: Carbonservation with demonstrated biodiversity and carbon gains: Carbon can pay but biodiversity must lead

description: Data were generated using the FullCAM carbon accounting model, version 4.0.3.26. <br>http://www.environment.gov.au/climate-change/climate-science-data/greenhouse-gas-measurement/land-sector<br>Richards, G. P. & Evans, D. M. W. Development of a carbon accounting model (FullCAM Vers. 1.0) for the Australian continent. Australian Forestry 67, 277-283, doi:10.1080/00049158.2004.10674947 (2004).These data were used to model carbon sequestration from restoration of temperate woodland in the eastern Mt Lofty Ranges South Australia. R code used to analyze the data are also included.The methodology for this dataset is outlined in the article "Bond AJ, O'Connor PJ, Cavagnaro, TR () Carbon can pay the way for biodiversity conservation"The files are named firstly with the numbers 1-12 to identify study site. The next part of the file name identifies the scenario modeled with 1, 2, 3 indicating vegetation age (last wildfire or clearance in 1983, 1955, 1939 respectively) and a,b,c indicating degradation rate as a proportion of standard growth rate (0.75,0.5,0.25 respectively) and the final part of the file name c indicating the presence of modeled vegetation recovery.<br>
DOI: 10.25909/5d258fa699358
title: Durum Exome Capture Reference (DECaR)

description: Consolidated Durum Exome Capture Reference (DECaR), constructed from recently available genome sequences of the wheat cultivars Svevo (Maccaferri et al. (2019) 'Durum wheat genome highlights past domestication signatures and future improvement targets', Nat Genet.) and Kronos (Grassoots Data Repository, Earlham Institute. https://opendata.earlham.ac.uk/opendata/data/Triticum_turgidum/EI/v1/), combined with assembled advanced spring-habit breeding line UAD0951096_F2:5, which has given rise to the commercially grown cultivar DBA-Aurora.<br>
DOI: 10.25909/5d26bceca47f1
title: Edwards et al. C-BARQ data used in investigating risk factors contributing to dogs fearful of the vet

description: In the current study, we investigated the risk factors associated with fear during veterinary examination and in novel situations (including first time at the veterinary clinic) from 26,555 responses in the Canine Behavioral Assessment and Research Questionnaire database. According to their guardians, 41% of companion dogs displayed mild to moderate fearful behaviour when examined by a veterinarian, and 14% exhibited severe or extreme fear in the same context. Predictors of fear during veterinary examination included: the dog’s breed group, their history of roles or activities, where they were sourced, their weight, the age of other dogs in the household and dog owner experience. However, combined these risk factors only explain a total of 7% of variance of fear observed during veterinary examination, suggesting other factors (e.g. human-animal interactions or clinic environment) may have a larger impact on dog experience in the veterinary context. <br>© University of Pennsylvania, 2019This dataset remains the copyright of the University of Pennsylvania.
DOI: 10.25909/5d304a44c5a4f
title: The effect of age and perturbation time on online updating

description: This dataset contains a read me file, plus the aggregated data for an older and younger group who participated in an experiment on online updating. <br>
DOI: 10.25909/5d3512c0a42be
title: PhD Thesis Chapter 3: Alignment and partition file

description: Danielle Stringer PhD thesis Chapter 3: Exon capture-based phylogeny and biogeographic history of <i>Haloniscus</i> (Isopoda: Philosciidae) from Australian arid zone groundwater-dependent ecosystems. <br>Final concatenated exon capture alignment and exon partition file. This final dataset comprises 786 exon alignments (for 437 of the targeted 469 loci) and 140,690 bp of DNA sequence data for 31 <i>Haloniscus </i>and four outgroup isopod (Paraplatyarthridae and Armadillidae) samples.
DOI: 10.25909/5d354467c921e
title: PhD Thesis Chapter 2: Alignments and partition files

description: Danielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: <i>Haloniscus</i>). <br>The files included here are the final three alignments (Datasets A–B) and the dataset exon partition files used in PartitionFinder. The three alignments (containing up to 25% (A), 50% (B), and 75% (C) missing sequences) include sequence data for 40 isopod samples and consist of 420, 807, and 1,026 exons, respectively.
DOI: 10.25909/5d3548f059aed
title: PhD Thesis Chapter 2: Bait design

description: Danielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: <i>Haloniscus</i>). <br>Final bait sequences generated using BaitFisher v1.2.7 and BaitFilter v1.0.4.<br>
DOI: 10.15468/dl.bqua4t
title: Occurrence Download

description: A dataset containing 231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salix brachista"
 ]
}

 The dataset includes 231 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054243-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25909/5d3672cf76c28
title: PhD Thesis Chapter 2: 469 orthologous groups (nucleotide alignments)

description: Danielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: <i>Haloniscus</i>).<br>Final set of 469 orthologous groups selected after filtering with MARE v0.1.2-rc for putative phylogenetic informativeness.
DOI: 10.25909/5d3674926d717
title: PhD Thesis Chapter 2: Isopod transcriptomes

description: Danielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: <i>Haloniscus</i>).<br>Six assembled isopod transcriptomes used in orthology assignment: <i>Haloniscus</i> sp., <i>Paraplatyarthrus </i>sp., <i>Paraplatyarthrus subterraneus, Porcellionides pruinosus</i>, <i>Armadillidium vulgare</i>, and <i>Ceratothoa </i>sp.
DOI: 10.25909/5d3678273b4f0
title: PhD Thesis Chapter 2: MARE information content results

description: Danielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: <i>Haloniscus</i>).<br>Results from the MARE v0.1.2-rc analysis. Files include an Excel spreadsheet containing the information content for each orthologous group as well as a matrix figure (along with an associated legend) detailing the results.
DOI: 10.25909/5d3ba3b7b1b2d
title: PhD Thesis Chapter 2: Example dataset for use with R script

description: Danielle Stringer PhD thesis Chapter 2: Development and evaluation of a custom bait design based on 469 single-copy protein-coding genes for exon capture of isopods (Philosciidae: <i>Haloniscus</i>).<br>Example dataset for use with R script (Supplementary File S4).
DOI: 10.25909/5d3e626a0c0ac
title: Observation Sessions Czech South Australian Study.docx

description: This dataset contains four observation sessions. Four groups of South Australian Czechs are speaking together in Czech about basic topics including travel, food, Christmas and life in the Czech Republic vs life in Australia.<br>The data is therefore in Czech. It was used for analysis in the area of language contact and the influence of grammatical borrowing and replication.<br>In Observation Session 4, there was one Slovak participant present. Her data was not used for analysis in the study.
DOI: 10.25909/5d500d96ee994
title: Host selection of Dolichogenidea tasmanica: implications for conservation biological control of light brown apple moth

description: These data files are (1) larval head capsules for instars of Epiphyas potsvittana and Merophyas divulsana, (2) host choices of Dolichogenidea tasmanica, and (3) adult wasp sizes and developmental times when developing in either E. postvittana or M. divulsana. Data files and corresponding metadata files are in plain text separated by commas.<br>
DOI: 10.5281/zenodo.17217157
title: The UAH Predictions of the Solar Wind and Magnetic Field at the Parker Solar Probe during Solar Encounter 25 (2025-09-13)

description: 1. Model

The MS-FLUKSS heliospheric MHD model is coupled with the WSA model (Kim et al. 2020), which used ADAPT-GONG input magnetograms, with the PFSS source surface height and the WSA outer boundary at 2.5 and 9 solar radii, respectively. The MHD model propagates the solar wind from 9 solar radii to 236 solar radii (1.1 AU) to fully enclose the PSP trajectory. Hence, field line tracing from PSP to the solar surface is performed through the MHD domain down to 9 solar radii instantaneously at approximately 1 hour cadence, where the origin of the field line on the photosphere is already known in the WSA model. See Badman et al. (2023) for details.

MS-FLUKSS: Multi-Scale Fluid-Kinetic Simulation Suite

MHD: Magnetohydrodynamic

WSA: Wang-Sheeley-Arge

ADAPT: Air Force Data Assimilative Photospheric flux Transport

GONG: Global Oscillation Network Group

PFSS: Potential Field Source Surface

PSP: Parker Solar Probe

 

2. Data

There are two sets of data files as described below:

(A) "PSP_AGONG_R000.dat" - "PSP_AGONG_R011.dat": MS-FLUKSS simulation results extracted along the PSP trajectory labeled by the input magnetogram (each of the 12 realizations of ADAPT-GONG) for the WSA model. 

Each data file consist of a header and 16 columns of numerical values in the following order:

(1) Time (fractional year)

(2) Heliocentric distance (AU)

(3) MS-FLUKSS longitude (rotated by ~180 degrees from inertial heliographic longitude in degrees)

(4) MS-FLUKSS latitude (same as heliographic latitude in degrees)

(5) Solar wind proton number density (cm^-3)

(6) Solar wind Vr (km/s)

(7) Solar wind Vphi (km/s)

(8) Solar wind Vtheta (km/s)

(9) Thermal pressure of solar wind and interstellar pickup ion mixture (picodyne/cm^2)

(10) Br (microgauss)

(11) Bphi (microgauss)

(12) Btheta (microgauss)

(13) Level set value for tracking the heliospheric current sheet

(14) Level set value for tracking the initial MS-FLUKSS longitude at the inner boundary

(15) Level set value for tracking the initial MS-FLUKSS latitude at the inner boundary

(16) Solar wind temperature.

 

(B) "UAH_psp_e25_20250913*_agongWSAmhd.csv": Carrington longitude and latitude of the predicted magnetic footpoint from 2025-09-13 to 2025-09-27.

 

Each data file consists of 4 columns of numeric values in the following order:

(1) Date (YYYY-MM-DD)

(2) Time (hh:mm:ss in UT)

(3) Carrington longitude (degree)

(4) Carrington latitude (degree)

 

3. Figures

There is one figure showing plots of predicted Br, Vr, density, and temperature at PSP: uah_psp_e25_20250913_agongWSAmhd.pdf.

A plot showing the footpoint prediction results projected onto the solar disk is available at the PSP science gateway, at https://psp-gateway.jhuapl.edu/website/SciencePlanning/MissionEvents/, under “Encounter 25”.
DOI: 10.5281/zenodo.17217158
title: The UAH Predictions of the Solar Wind and Magnetic Field at the Parker Solar Probe during Solar Encounter 25 (2025-09-13)

description: 1. Model

The MS-FLUKSS heliospheric MHD model is coupled with the WSA model (Kim et al. 2020), which used ADAPT-GONG input magnetograms, with the PFSS source surface height and the WSA outer boundary at 2.5 and 9 solar radii, respectively. The MHD model propagates the solar wind from 9 solar radii to 236 solar radii (1.1 AU) to fully enclose the PSP trajectory. Hence, field line tracing from PSP to the solar surface is performed through the MHD domain down to 9 solar radii instantaneously at approximately 1 hour cadence, where the origin of the field line on the photosphere is already known in the WSA model. See Badman et al. (2023) for details.

MS-FLUKSS: Multi-Scale Fluid-Kinetic Simulation Suite

MHD: Magnetohydrodynamic

WSA: Wang-Sheeley-Arge

ADAPT: Air Force Data Assimilative Photospheric flux Transport

GONG: Global Oscillation Network Group

PFSS: Potential Field Source Surface

PSP: Parker Solar Probe

 

2. Data

There are two sets of data files as described below:

(A) "PSP_AGONG_R000.dat" - "PSP_AGONG_R011.dat": MS-FLUKSS simulation results extracted along the PSP trajectory labeled by the input magnetogram (each of the 12 realizations of ADAPT-GONG) for the WSA model. 

Each data file consist of a header and 16 columns of numerical values in the following order:

(1) Time (fractional year)

(2) Heliocentric distance (AU)

(3) MS-FLUKSS longitude (rotated by ~180 degrees from inertial heliographic longitude in degrees)

(4) MS-FLUKSS latitude (same as heliographic latitude in degrees)

(5) Solar wind proton number density (cm^-3)

(6) Solar wind Vr (km/s)

(7) Solar wind Vphi (km/s)

(8) Solar wind Vtheta (km/s)

(9) Thermal pressure of solar wind and interstellar pickup ion mixture (picodyne/cm^2)

(10) Br (microgauss)

(11) Bphi (microgauss)

(12) Btheta (microgauss)

(13) Level set value for tracking the heliospheric current sheet

(14) Level set value for tracking the initial MS-FLUKSS longitude at the inner boundary

(15) Level set value for tracking the initial MS-FLUKSS latitude at the inner boundary

(16) Solar wind temperature.

 

(B) "UAH_psp_e25_20250913*_agongWSAmhd.csv": Carrington longitude and latitude of the predicted magnetic footpoint from 2025-09-13 to 2025-09-27.

 

Each data file consists of 4 columns of numeric values in the following order:

(1) Date (YYYY-MM-DD)

(2) Time (hh:mm:ss in UT)

(3) Carrington longitude (degree)

(4) Carrington latitude (degree)

 

3. Figures

There is one figure showing plots of predicted Br, Vr, density, and temperature at PSP: uah_psp_e25_20250913_agongWSAmhd.pdf.

A plot showing the footpoint prediction results projected onto the solar disk is available at the PSP science gateway, at https://psp-gateway.jhuapl.edu/website/SciencePlanning/MissionEvents/, under “Encounter 25”.
DOI: 10.25909/5d54cef9e8e11
title: Sex differences in corneal neovascularization in response to superficial corneal cautery in the rat Irani et al.zip

description: Raw data associated with publication in PLOS ONE<br>Sex differences in corneal neovascularization in response to superficial cautery in the rat<br>DOI10.1371/journal.pone.0221566<br>
DOI: 10.25909/5d5fc9a986cdb
title: Low Earth Orbit object observations using the Buckland Park VHF radar by Holdsworth et al, Radio Science 2019

description: Data supporting conclusions for the above paper.
DOI: 10.25909/5d65c816af254
title: Aspects of decision-making in the use of wearable devices for mental health problems

description: Written responses regarding aspects about wearable devices that participants wanted to know more about, before they made a decision about using them for addressing a mental health problem
DOI: 10.25909/5d9c14798186b
title: Trihalomethane concentrations in public drinking water in Perth, Australia in 2012-2013

description: Water samples were collected across Perth, Australia in 2012 and 2013 and analyses for trihalomethane concentrations.<br>
DOI: 10.25909/5dafed7096ae5
title: Data for: Patterns of intracolumnar size variation inform the heterochronic mechanisms underlying extreme body shape divergence in microcephalic sea snakes

description: Morphometric dataset comprising vertebral size data for pre-cloacal vertebrae for neonates and adults of three species of sea snake (<i>Hydrophis macdowelli, H. obscurus, </i>and<i> H. curtus</i>)<b><br></b><b>File list:</b><br># R script<br>Analyses.R # Data files:H_curtus_FMNH_202011.csvH_curtus_FMNH_202032.csvH_curtus_FMNH_202086.csvH_curtus_QM_J11175.csvH_macdowelli_QM_J22453.csvH_macdowelli_QM_J47243.csvH_macdowelli_QM_J93156.csvH_macdowelli_SAM_R24236.csvH_obscurus_ZMUC_R661244.csvH_obscurus_ZMUC_R661253.csvH_obscurus_ZMUC_R661255.csv# Metadataontovert.csv
DOI: 10.25909/5db8cd2782ebd
title: Revegetation of urban green space rewilds soil microbiotas with implications for human health and urban design

description: This item contains ASV and taxonomic matrices (including reference sequences) for bacteria, fungi, archaea, and eukaryotes from urban green space soils. There is also metadata regarding vegetation soil physicochemistry.
DOI: 10.25909/5e151e8fc05f0
title: BJW and unrealistic bias Callisto first years N140

description: this is the data set collected by Jordana Callisto for her honours thesis in 2019.
DOI: 10.25909/5dbac1950942c
title: Young_Higgins_Austin_FASTAfiles.fasta

description: This file contains FASTA formatted mtDNA genome sequences for 31 unidentified humans. MtDNA genomes were obtained by hybridisation enrichment and alignment of reads to the RSRS. See Young, JM, Higgins, D and Austin, JJ (2019) Hybridization enrichment to improve forensic mitochondrial DNA analysis of highly degraded human remains. Frontiers in Ecology and Evolution
DOI: 10.25909/5dca468af3e79
title: Dataset 2019WR026149

description: Data for manuscript 2019WR026149
DOI: 10.25909/5dd4a6279d1bc
title: BJW and adolescence N1128 2019 data collection

description: Data set collected by David Scholz for his honours thesis 2019.
DOI: 10.25909/5dddd0fe777cc
title: Real-Time, Smart Rainwater Storage Systems: Potential Solution to Mitigate Urban Flooding

description: S1 is the summary dataset of all peak flow reduction S2 is the example operation rules S3 is an example SWMM model
DOI: 10.25909/5df1bf2f79758
title: Final Delphi outcomes.pdf

description: Delphi survey questions and responses in the development of an IPL balanced scorecard
DOI: 10.25909/5df49f6dd1459
title: Jones et al, 2019. Frontiers in Marine Science. Drone imagery mangrove biomass datasets

description: Imagery collected using an unmanned aerial vehicle (UAV) over mangroves in North Arm Creek, South Australia. Datasets provided are a point cloud and orthomosaic. Survey site and methods are provided in the paper here:
DOI: 10.25909/5e070a6f7950f
title: Larger is better in the parasitoid Eretmocerus warrae (Hymenoptera: Aphelinidae)

description: Data used in the paper "Larger is better in the parasitoid Eretmocerus warrae (Hymenoptera: Aphelinidae)" published in 2020 in the journal "Insects". These data were collected as part of the PhD project of WANG Tao. <br>
DOI: 10.25909/5e152383cf12d
title: BJW and unrealistic bias PROLIFIC study N208

description: this is the data set collected with Prolific participants with participant descriptions of valued and feared outcomes redacted to protect anonymity
DOI: 10.25909/5e182415d25b2
title: Calcite Thailand Supp data 1.xlsx

description: Supplementary geochron and geochem data to 'Meso-Cenozoic deformation history of Thailand; insights from calcite U-Pb geochronology'
DOI: 10.25909/5e3b5e9d1123d
title: Survey Questions.pdf

description: This list details the questions asked in my 2018 empirical survey of SMEs, as reported in: Mark Giancaspro, 'Testing Stewart Macaulay's Theory Down Under: A Study of Australian Small to Medium-Sized Enterprises' Understandings of, and Experiences with, Contract Law' in John Eldridge and Tom Pilkington (eds) Australian Contract Law in the 21st Century (Federation Press, 2020).<br><br>University of Adelaide Human Research Ethics Committee (HREC) Ethics Approval No. H-2017-125.
DOI: 10.25909/5e6591c8b6ff5
title: PCHF additional data

description: This are the additional prostate cancer health and fitness data files - student PHD project. <br>This includes: time on side, numbe of pages viewed by group, full pre/post survey + PCHF qualitative comments by group with some demographical contect.