cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wbsmip
title: Occurrence Download

description: A dataset containing 1022 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helianthus divaricatus L."
 ]
}

 The dataset includes 1022 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004732-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ta8sns
title: Occurrence Download

description: A dataset containing 6071 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Fauna y Flora de Cinaruco - 2014- 2016"
 ]
}

 The dataset includes 6071 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043585-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ktwokx
title: Occurrence Download

description: A dataset containing 5923 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Australian Coral Ecoregions"
 ]
}

 The dataset includes 5923 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004732-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ywrs5
title: Occurrence Download

description: A dataset containing 2848 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Echinodorus berteroi (Spreng.) Fassett, Schoenoplectiella saximontana (Fernald) Lye, Plantago elongata Hegetschw.)"
 ]
}

 The dataset includes 2848 records from 158 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048277-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.raxjyy
title: Occurrence Download

description: A dataset containing 1017 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Sistrurus catenatus (Rafinesque, 1818)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1017 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004732-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tzhsmz
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "TaxonKey is Eleutherococcus trifoliatus (L.) S.Y.Hu"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049177-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qzjvol
title: Occurrence Download

description: A dataset containing 3088 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Saxifraga hirsuta L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3088 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004732-171113114016250/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fsgbvx
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "TaxonKey is Eleutherococcus trifoliatus (L.) S.Y.Hu"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049176-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jlqcog
title: Occurrence Download

description: A dataset containing 16910662 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16910662 records from 1551 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004732-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9nbcm6
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ethiopia",
 "OccurrenceStatus is Present",
 "TaxonKey is Moringa stenopetala (Baker fil.) Cufod."
 ]
}

 The dataset includes 20 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008737-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26717068.v1
title: Additional file 2 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 2: Table S2. Information table of high polymorphism candidate SNP sites from resequencing.
DOI: 10.6084/m9.figshare.26717071
title: Additional file 3 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 3: Table S3. Information table of candidate SNP sites with high Fst value from resequencing.
DOI: 10.6084/m9.figshare.26717071.v1
title: Additional file 3 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 3: Table S3. Information table of candidate SNP sites with high Fst value from resequencing.
DOI: 10.6084/m9.figshare.26717074
title: Additional file 4 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 4: Table S4. Information table of high polymorphic candidate SNP sites from GGVD.
DOI: 10.6084/m9.figshare.26717074.v1
title: Additional file 4 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 4: Table S4. Information table of high polymorphic candidate SNP sites from GGVD.
DOI: 10.6084/m9.figshare.26717077
title: Additional file 5 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 5: Table S5. Information table of candidate SNP sites of immune gene form GGVD.
DOI: 10.6084/m9.figshare.26717077.v1
title: Additional file 5 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 5: Table S5. Information table of candidate SNP sites of immune gene form GGVD.
DOI: 10.6084/m9.figshare.26717080
title: Additional file 6 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 6: Table S6. Information table of candidate SNP sites related to important traits from literature.
DOI: 10.6084/m9.figshare.26717080.v1
title: Additional file 6 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 6: Table S6. Information table of candidate SNP sites related to important traits from literature.
DOI: 10.6084/m9.figshare.26717083
title: Additional file 7 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 7: Table S7. Information table of SNP sites on the 10K cGPS liquid chip for Hainan black goat.
DOI: 10.6084/m9.figshare.26717083.v1
title: Additional file 7 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 7: Table S7. Information table of SNP sites on the 10K cGPS liquid chip for Hainan black goat.
DOI: 10.6084/m9.figshare.26717086
title: Additional file 8 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 8: Table S8. Microarray loci annotation results and GO and KEGG analysis of affected genes.
DOI: 10.6084/m9.figshare.26717086.v1
title: Additional file 8 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 8: Table S8. Microarray loci annotation results and GO and KEGG analysis of affected genes.
DOI: 10.6084/m9.figshare.26717089
title: Additional file 9 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 9: Table S9. Statistical table of SNP detection rate in 104 samples.
DOI: 10.6084/m9.figshare.26717089.v1
title: Additional file 9 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 9: Table S9. Statistical table of SNP detection rate in 104 samples.
DOI: 10.6084/m9.figshare.26717092
title: Additional file 10 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 10: Table S10. Genotyping results and consistency rate of cGPS liquid chip and resequencing.
DOI: 10.6084/m9.figshare.26717092.v1
title: Additional file 10 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 10: Table S10. Genotyping results and consistency rate of cGPS liquid chip and resequencing.
DOI: 10.6084/m9.figshare.26717095
title: Additional file 11 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 11: Table S11. Information table of genotyping results in the repeated sample.
DOI: 10.6084/m9.figshare.26717095.v1
title: Additional file 11 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 11: Table S11. Information table of genotyping results in the repeated sample.
DOI: 10.6084/m9.figshare.26717098
title: Additional file 12 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 12: Table S12. Information table of SNP sites genotyping data of the 108 samples detected by the chip.
DOI: 10.6084/m9.figshare.26717098.v1
title: Additional file 12 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 12: Table S12. Information table of SNP sites genotyping data of the 108 samples detected by the chip.
DOI: 10.6084/m9.figshare.26717101
title: Additional file 13 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 13: Table S13. Information table of SNP sites of the 108 samples detected by the chip.
DOI: 10.6084/m9.figshare.26717101.v1
title: Additional file 13 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 13: Table S13. Information table of SNP sites of the 108 samples detected by the chip.
DOI: 10.6084/m9.figshare.26717104
title: Additional file 14 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 14: Table S14. Information table of 104 goat samples for chip verification.
DOI: 10.6084/m9.figshare.26717104.v1
title: Additional file 14 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 14: Table S14. Information table of 104 goat samples for chip verification.
DOI: 10.6084/m9.figshare.26717107
title: Additional file 15 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 15. 108 goat chips test results.
DOI: 10.6084/m9.figshare.26717107.v1
title: Additional file 15 of Development and verification of a 10K liquid chip for Hainan black goat based on genotyping by pinpoint sequencing of liquid captured targets

description: Additional file 15. 108 goat chips test results.
DOI: 10.6084/m9.figshare.26717113
title: Additional file 2 of Mapping and functional characterization of structural variation in 1060 pig genomes

description: Additional file 2: Table S1. Non-redundant SV statistics for sub-populations. Table S2. SV statistics for individuals. Table S3. SV list. Table S4. Overlaps between WGS SVs derived from 30 Meishan pigs and SVs derived from long-read-based assembly comparison of MSCAAS v1 and Sscrofa11.1. Table S5. Summary statistics of overlapping rate between Meishan WGS SV and SVs derived from long-read-based assembly comparison of MSCAAS v1 and Sscrofa11.1. Table S6. Statistics of SVs overlapped by repeats. Table S7. GO enrichment results of total SV overlapped genes. Table S8. GO enrichment results of singleton SV overlapped genes. Table S9. Summary Statistics of SVs overlapped by protein coding genes. Table S10. Categories of gene-overlapping SVs. Table S11. Proportions of SVs overlapped by various chromatin states for tissues. Table S12. Proportions of singleton SVs overlapped by various chromatin states for tissues.
DOI: 10.6084/m9.figshare.26717116
title: Additional file 3 of Mapping and functional characterization of structural variation in 1060 pig genomes

description: Additional file 3: Table S13. Locations of SV-related enhancers and promoters. Table S14. Proportions of SV-related regulators in various locations of tissues. Table S15. Statistics of SV-related QTL. Table S16. QTL mapping SV for individual genome. Table S17. Locations of group-specific or high FST SVs. Table S18. Summary of group-specific or group-differential SVs. Table S19. GO enrichment results of genes in group-specific or group-differential SVs. Table S20. KEGG pathway analysis of genes mapping/flanking group-specific or group-differential SVs. Table S21. RNA-seq sample list in AS and EU ancestral group comparison. Table S22. Statistics of RNA-seq samples for AS and EU comparison. Table S23. The SV and gene list for AS and EU comparison. Table S24. SV-related DEGs for AS and EU ancestral group comparison. Table S25. Statistics of multiple-tissue SV-related DEGs between AS and EU groups. Table S26. Statistics of SV-related multiple-tissue DEGs with discordant expression levels between tissues. Table S27. TWAS annotation of SV-related multiple-tissue DEGs between AS and EU pigs. Table S28. Allele frequency of MYO5A DEL in each population. Table S29. RNA-seq sample list in SV-related analyses for sub-populations. Table S30. SV-related DEGs for sub-population comparisons. Table S31. Length statistics for chromatin states in the chr8:130924619-130980283 DUP region. Table S32. Median r2 values for 1060 pigs, 425 EUC pigs, and 187 Yorkshire pigs at different genomic distances. Table S33. Proportions of SV with linked, tagged, and highly-tagged r2 with SNPs. Table S34. Proportions of SV with linked, tagged, and highly-tagged r2 with functional SNPs. Table S35. List of SV-linked functional SNPs with multiple signals for 1060 pigs. Table S36. List of SV directly overlapped e/sGenes for their linked SNPs in 1060 pigs. Table S37. List of the 51 bp DEL overlapped enhancers in 14 tissues. Table S38. List of the 51 bp DEL-linked SNPs. Table S39. List of QTLs mapped within the 2 Mb region. Table S40. List of SV-linked functional SNPs with multiple signals for 425 EUC pigs. Table S41. List of SV-linked functional SNPs with multiple signals for 187 Yorkshire pigs. Table S42. MYO5A functions based on GWAS results of EMBL-EBI. Table S43. List of data information for all analyzed samples. Table S44. Pig genome bad bins in our dataset. Table S45. All analyzed genes.
DOI: 10.6084/m9.figshare.26717113.v1
title: Additional file 2 of Mapping and functional characterization of structural variation in 1060 pig genomes

description: Additional file 2: Table S1. Non-redundant SV statistics for sub-populations. Table S2. SV statistics for individuals. Table S3. SV list. Table S4. Overlaps between WGS SVs derived from 30 Meishan pigs and SVs derived from long-read-based assembly comparison of MSCAAS v1 and Sscrofa11.1. Table S5. Summary statistics of overlapping rate between Meishan WGS SV and SVs derived from long-read-based assembly comparison of MSCAAS v1 and Sscrofa11.1. Table S6. Statistics of SVs overlapped by repeats. Table S7. GO enrichment results of total SV overlapped genes. Table S8. GO enrichment results of singleton SV overlapped genes. Table S9. Summary Statistics of SVs overlapped by protein coding genes. Table S10. Categories of gene-overlapping SVs. Table S11. Proportions of SVs overlapped by various chromatin states for tissues. Table S12. Proportions of singleton SVs overlapped by various chromatin states for tissues.
DOI: 10.6084/m9.figshare.26717116.v1
title: Additional file 3 of Mapping and functional characterization of structural variation in 1060 pig genomes

description: Additional file 3: Table S13. Locations of SV-related enhancers and promoters. Table S14. Proportions of SV-related regulators in various locations of tissues. Table S15. Statistics of SV-related QTL. Table S16. QTL mapping SV for individual genome. Table S17. Locations of group-specific or high FST SVs. Table S18. Summary of group-specific or group-differential SVs. Table S19. GO enrichment results of genes in group-specific or group-differential SVs. Table S20. KEGG pathway analysis of genes mapping/flanking group-specific or group-differential SVs. Table S21. RNA-seq sample list in AS and EU ancestral group comparison. Table S22. Statistics of RNA-seq samples for AS and EU comparison. Table S23. The SV and gene list for AS and EU comparison. Table S24. SV-related DEGs for AS and EU ancestral group comparison. Table S25. Statistics of multiple-tissue SV-related DEGs between AS and EU groups. Table S26. Statistics of SV-related multiple-tissue DEGs with discordant expression levels between tissues. Table S27. TWAS annotation of SV-related multiple-tissue DEGs between AS and EU pigs. Table S28. Allele frequency of MYO5A DEL in each population. Table S29. RNA-seq sample list in SV-related analyses for sub-populations. Table S30. SV-related DEGs for sub-population comparisons. Table S31. Length statistics for chromatin states in the chr8:130924619-130980283 DUP region. Table S32. Median r2 values for 1060 pigs, 425 EUC pigs, and 187 Yorkshire pigs at different genomic distances. Table S33. Proportions of SV with linked, tagged, and highly-tagged r2 with SNPs. Table S34. Proportions of SV with linked, tagged, and highly-tagged r2 with functional SNPs. Table S35. List of SV-linked functional SNPs with multiple signals for 1060 pigs. Table S36. List of SV directly overlapped e/sGenes for their linked SNPs in 1060 pigs. Table S37. List of the 51 bp DEL overlapped enhancers in 14 tissues. Table S38. List of the 51 bp DEL-linked SNPs. Table S39. List of QTLs mapped within the 2 Mb region. Table S40. List of SV-linked functional SNPs with multiple signals for 425 EUC pigs. Table S41. List of SV-linked functional SNPs with multiple signals for 187 Yorkshire pigs. Table S42. MYO5A functions based on GWAS results of EMBL-EBI. Table S43. List of data information for all analyzed samples. Table S44. Pig genome bad bins in our dataset. Table S45. All analyzed genes.
DOI: 10.15468/dl.c9w5h5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.634506 -33.029498, 148.634506 -33.042973, 148.643489 -33.042973, 148.643489 -33.036235, 148.636752 -33.036235, 148.636752 -33.029498, 148.634506 -33.029498))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068115-240626123714530/datasets/export for details.
DOI: 10.15468/dl.ym5azf
title: Occurrence Download

description: A dataset containing 5565977 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Year 2000-2024"
 ]
}

 The dataset includes 5565977 records from 3533 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068097-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wa55kg
title: Occurrence Download

description: A dataset containing 614 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sonchus brachyotus DC."
 ]
}

 The dataset includes 614 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054032-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pdpqk3
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Centaurea montana L.",
 "Year 1924-1926"
 ]
}

 The dataset includes 32 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084909-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mcp6pw
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Listeria ivanovii subsp. ivanovii"
 ]
}

 The dataset includes 21 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0414420-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f0kiof
title: Occurrence Download

description: A dataset containing 426 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psilocybe cubensis (Earle) Singer"
 ]
}

 The dataset includes 426 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008391-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.