cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11470778
title: Dataset for manuscript "Regional variability of aerosol impacts on clouds and radiation in global kilometer-scale simulations"

description: This dataset includes two Jupyterlab book python script and a folder of compressed data. (latest version includes updated script to fix mising variable)

Due to the size of the dataset we are unable to include the raw simulation output but have instead inluded all datasets required to plot the figures.

The python script "original_analysis_script.ipynb" contains the code that was used to perform the analysis on the outputs from the simulations. This is not intended for public use.

The python script "figure_plotting_scripts.ipynb" is a cut-down verison of the original code that can be used to plot the figures as presented in the manuscript. All neccessary data to achieve this can be found in the compressed folder "data_arrays". 

The scripts will run on Jupyterlab book. Providing the user has the neccessary python modules available the plotting script can be run by amending the paths for the figure outout directory and the uncompressed "data_arrays" directory. These paths can be found at the top of the script.
DOI: 10.5281/zenodo.15912874
title: Dataset for manuscript "Regional variability of aerosol impacts on clouds and radiation in global kilometer-scale simulations"

description: This dataset includes two Jupyterlab book python script and a folder of compressed data. (latest version includes updated script to fix mising variable)

Due to the size of the dataset we are unable to include the raw simulation output but have instead inluded all datasets required to plot the figures.

The python script "original_analysis_script.ipynb" contains the code that was used to perform the analysis on the outputs from the simulations. This is not intended for public use.

The python script "figure_plotting_scripts.ipynb" is a cut-down verison of the original code that can be used to plot the figures as presented in the manuscript. All neccessary data to achieve this can be found in the compressed folder "data_arrays". 

The scripts will run on Jupyterlab book. Providing the user has the neccessary python modules available the plotting script can be run by amending the paths for the figure outout directory and the uncompressed "data_arrays" directory. These paths can be found at the top of the script.
DOI: 10.15468/dl.dez76r
title: Occurrence Download

description: A dataset containing 5164 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macrhybopsis storeriana"
 ]
}

 The dataset includes 5164 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016810-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mmpf2
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Banco de Datos de la Biodiversidad de la Comunitat Valenciana",
 "TaxonKey is Misgurnus anguillicaudatus"
 ]
}

 The dataset includes 42 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016811-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15779083
title: Quantum phase transition driven by competing intralayer and interlayer hopping of Ni-$d_{3z^2-r^2}$ orbitals in bilayer nickelates

description: Data for all the figures in the main text.
DOI: 10.15468/dl.6yv2zz
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllium siccifolium"
 ]
}

 The dataset includes 27 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016812-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3wmbqm
title: Occurrence Download

description: A dataset containing 414 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xyris setigera"
 ]
}

 The dataset includes 414 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016813-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxm69j
title: Occurrence Download

description: A dataset containing 33087 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Biodiversitätsdatenbank Nationalpark Kalkalpen",
 "Geometry POLYGON ((14.44162 47.85658, 14.43379 47.85596, 14.42533 47.85147, 14.42074 47.84371, 14.42116 47.83727, 14.42499 47.83144, 14.43422 47.82785, 14.44544 47.82827, 14.45833 47.82969, 14.46604 47.83551, 14.4683 47.84171, 14.46563 47.84604, 14.45979 47.84965, 14.45719 47.85367, 14.45092 47.85564, 14.44162 47.85658))"
 ]
}

 The dataset includes 33087 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016814-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7srjsv
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Briza media pauciflora, Briza media pilosa, Briza media pumila, Briza media repens, Briza media serotina, Briza media umbrosa, Briza media elatior, Briza media lutescens, Briza media serotina, Briza media albida)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 28 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016815-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gazyqx
title: Occurrence Download

description: A dataset containing 107945 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, , , , , , , , , , , , , , , , , Falcataria moluccana, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Cribraria aurantiaca, , , , , , , , , Stemonitis splendens, Physarum cremiluteum, , , , , , , Hemitrichia calyculata, , , , , , , , , Ceratiomyxa fruticulosa, , Lycogala epidendrum, Collaria arcyrionema, , , , Arcyria denudata, , , , , , , , , , Didymium bahiense, Physarum compressum, , Physarum pusillum, Paratemnoides assimilis, , Arcyria cinerea, , , Albizia falcata, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , )",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 107945 records from 498 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016787-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3j5pv5
title: Occurrence Download

description: A dataset containing 167 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Narudasia festiva"
 ]
}

 The dataset includes 167 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016817-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14779473
title: Analysis of Calcium Spike Trains in HEK293 Cells

description: This repository contains processed calcium spike train data derived from the analysis of time-lapse fluorescence imaging of HEK293 cells stimulated with carbachol.

Each experiment (named as YYYYMMDDexp#, e.g., 20240309E1) is a .csv file containing spike train features extracted from stationary sections of the recording. These files serve as input for the analysis script available at https://github.com/azzonic/calcium_spiketrains_analysis

For cells displaying multiple stationary spiking sections (i.e., changes in spiking frequency during the recording), more than one file is provided with suffixes like _# (e.g., 20240309E1_3). These represent different stationary sections, analysed separately, of the same spike train from the main file. 



The original fluorescence traces from where stationary sections have been selected are available at 10.5281/zenodo.15705673
DOI: 10.5281/zenodo.14779474
title: Analysis of Calcium Spike Trains in HEK293 Cells

description: This repository contains processed calcium spike train data derived from the analysis of time-lapse fluorescence imaging of HEK293 cells stimulated with carbachol.

Each experiment (named as YYYYMMDDexp#, e.g., 20240309E1) is a .csv file containing spike train features extracted from stationary sections of the recording. These files serve as input for the analysis script available at https://github.com/azzonic/calcium_spiketrains_analysis

For cells displaying multiple stationary spiking sections (i.e., changes in spiking frequency during the recording), more than one file is provided with suffixes like _# (e.g., 20240309E1_3). These represent different stationary sections, analysed separately, of the same spike train from the main file. 



The original fluorescence traces from where stationary sections have been selected are available at 10.5281/zenodo.15705673
DOI: 10.15468/dl.s96tn8
title: Occurrence Download

description: A dataset containing 3070 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Hirundo rustica)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 3070 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016818-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u7crw4
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erysimum nasturtioides"
 ]
}

 The dataset includes 32 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016819-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhbxku
title: Occurrence Download

description: A dataset containing 100 records in GBIF matching the query:
SELECT "year", "month" speciesKey, species , countryCode, decimallongitude, decimallatitude FROM occurrence WHERE continent = 'EUROPE' AND taxonKey = 3329049 LIMIT 100

 The dataset's 100 records were derived from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016796-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9c7vrx
title: Occurrence Download

description: A dataset containing 401 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macaranga kurzii"
 ]
}

 The dataset includes 401 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016820-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d8g4f9
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sisymbrium gamosepalum"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016821-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eepr6g
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diaphorina citri",
 "Country is Bahamas",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016822-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ycjxqk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ricinus communis",
 "Country is Marshall Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016823-250711103210423/datasets/export for details.
DOI: 10.15468/dl.d78awk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diaphorina citri",
 "Country is Cuba",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016824-250711103210423/datasets/export for details.
DOI: 10.15468/dl.akjnn2
title: Occurrence Download

description: A dataset containing 4454 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypnum cupressiforme",
 "Geometry POLYGON((-8.00174339329464 54.1998526673513, 0.202120938926891 54.1998526673513, 0.202120938926891 61.2628565887411, -8.00174339329464 61.2628565887411, -8.00174339329464 54.1998526673513))",
 "CoordinateUncertaintyInMeters is 0,101",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4454 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016825-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15846484
title: From Voice To Shell: Text To Docker Dataset

description: Dataset with 3,192 distinct samples of docker commands along with their expression as natural language, called 'prompt'. English (EN) version is comprised by three splits: train (1,995 samples), validation (931 samples), and test (266 samples). Spanish (ES) version holds only a test split (266 samples).
DOI: 10.5281/zenodo.15846485
title: From Voice To Shell: Text To Docker Dataset

description: Dataset with 3,192 distinct samples of docker commands along with their expression as natural language, called 'prompt'. English (EN) version is comprised by three splits: train (1,995 samples), validation (931 samples), and test (266 samples). Spanish (ES) version holds only a test split (266 samples).
DOI: 10.34740/kaggle/dsv/12475594
title: Full TMDB Movies Dataset 2024 (1M Movies)
DOI: 10.15468/dl.y4q9pd
title: Occurrence Download

description: A dataset containing 3777 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Nephrolepis cordifolia",
 "Year 1948-2025"
 ]
}

 The dataset includes 3777 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016826-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15875511
title: HUVEC and ASC52telo senolytics models

description: This dataset includes the Excel spreadsheet summarizing the assay results and the original GraphPad Prism project files used to generate figures and perform statistical analyses.
DOI: 10.5281/zenodo.15875512
title: HUVEC and ASC52telo senolytics models

description: This dataset includes the Excel spreadsheet summarizing the assay results and the original GraphPad Prism project files used to generate figures and perform statistical analyses.
DOI: 10.15468/dl.advewu
title: Occurrence Download

description: A dataset containing 646 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hybopsis storeriana"
 ]
}

 The dataset includes 646 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016827-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12475453
title: Informasi Nilai Gizi Indonesia
DOI: 10.15468/dl.6tmsvn
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xysmalobium gerrardii"
 ]
}

 The dataset includes 45 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016829-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pv3qau
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynanchum diemii"
 ]
}

 The dataset includes 32 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016828-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ykhd75
title: Occurrence Download

description: A dataset containing 2085730 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Dragonfly records from the British Dragonfly Society Recording Scheme",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2085730 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016816-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7rpqhz
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Briza media alpestris, Briza media clusii, Briza media coarctata, Briza media dublanensis, Briza media elatior, Briza media gracilenta, Briza media gracilior, Briza media gracilis, Briza media hirsuta, Briza media horakii)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016832-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c7dfcw
title: Occurrence Download

description: A dataset containing 167 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Descurainia adenophora"
 ]
}

 The dataset includes 167 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016831-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wny9k8
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((36.47461 37.57941,50.625 37.57941,50.625 46.31658,36.47461 46.31658,36.47461 37.57941))",
 "TaxonKey is Betula litwinowii Doluch.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 70 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017426-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ymbrx9
title: Occurrence Download

description: A dataset containing 147 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((36.91406 37.37016,50.97656 37.37016,50.97656 47.04018,36.91406 47.04018,36.91406 37.37016))",
 "TaxonKey is Pinus sylvestris L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 147 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015461-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ezr54q
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((37.00195 37.43997,50.44922 37.43997,50.44922 46.13417,37.00195 46.13417,37.00195 37.43997))",
 "TaxonKey is Betula pendula Roth",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 86 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017434-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ndfhf
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllium antonkozlovi"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016833-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15848972
title: From Voice To Shell: Speech To Docker Dataset

description: Dataset with 3,192 audio files, 3.92 hours, comprising voice recordings of 12 subjects (4 women and 8 men) while enunciating the prompts of 'text-to-docker' dataset test samples in English (EN). Followed protocol has been approved by the Social Research Ethics Committee (SREC) of the University of Castilla-La Mancha (UCLM) under reference number CEIS-2025-119450. Human participation is justified and the benefits and risks have been adequately assessed to participants, developing a participation mechanism which warrants equal opportunities for research collaboration. Every participant has been provided an informed consent document including the necessary information of research purposes and requirements. It also complies with the regulations in force regarding the personal data protection.

Audio files are encrypted, which could be extracted using the decrypt.py script:

user@host:#~/data/$ lsen  decrypt.py  metadatauser@host:#~/data/$ pip install cryptography[... install dependencies ...]user@host:#~/data/$ python3 decrypt.py -p <password> .[... decrypt files  ...]