cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17090888.v1
title: Supplementary Material for: Comparative Analysis of Postoperative Complications after Cytoreductive Surgery and HIPEC in Gastric Cancer

description: <b><i>Introduction:</i></b> Patients with advanced gastric cancer (AGC) frequently show peritoneal carcinomatosis (PC). PC reduces life expectancy and quality of life. Cytoreductive surgery (CRS) with hyperthermic intraperitoneal chemotherapy (HIPEC) has been shown to improve overall survival. Nevertheless, it has been reported that CRS and HIPEC are accompanied by an increase in postoperative complications. The purpose of this study was to investigate the complications associated with CRS and HIPEC and overall and disease-free survival. <b><i>Methods:</i></b> Patients with AGC and PC, who received complete CRS and HIPEC, were included in the HIPEC group (<i>n</i> = 15). Patients with AGC but without PC, who received resection of the primary tumor alone, constituted the control group (<i>n</i> = 43). <b><i>Results:</i></b> Patients enrolled in the HIPEC group presented with a median PCI of 7. In comparison with the control group, no differences were found in patient characteristics, risk factors, pathological findings, and operative procedures. Twenty-five percentage of the patients in both groups suffered from serious postoperative complications (CDC ≥3a). Surgical and medical complications, rate of reoperation, and mortality did not differ. Also, the recurrence pattern, median survival, and 1- and 2-year survival rates showed no differences. <b><i>Conclusion:</i></b> CRS and HIPEC do not lead to an increased postoperative morbidity and mortality in AGC with PC. Albeit the poorer prognosis of patients with PC, survival of both groups was comparable.
DOI: 10.6084/m9.figshare.24658131.v1
title: MEG Data

description: The human brain exhibits coordinated information processing among brain regions, resembling units in social organisations. Understanding how these brain regions operate and collaborate is a scientific question with great importance and challenge. This study draws an analogy between brain regions and social organisations and explores whether the brain operates in a decentralized or centralized mode by employing a social interaction perception task. We utilized magnetoencephalography technology to analyze the dynamic processes involved in perceiving the social interactions of others. Our findings reveal that the brain strikes a balance between centralized and decentralized modes. When confronted with information of low ambiguity, the brain leaned towards decentralized decision-making, showcasing a decentralized mode. In high-ambiguity conditions, the superior temporal sulcus takes on a dominant role, indicating a more centralized control mechanism. Our findings indicate adaptive decision-making processes in the human brain, tactically shifting between centralized and decentralized strategies to enhance information processing efficiency.
DOI: 10.6084/m9.figshare.29066498.v1
title: Data S6_RC gradient.prism

description: files for "Parallel morphological and functional development in the Xenopus retinotectal system" by Li et al., 2025
DOI: 10.6084/m9.figshare.4233425.v1
title: Supplementary Material for: Positive CD63 Basophil Activation Tests Are Common in Children with Chronic Spontaneous Urticaria and Linked to High Disease Activity

description: <b><i>Background:</i></b> The basophil activation test (BAT) using CD63 expression is a sensitive and specific tool for the diagnostic workup of autoimmune chronic spontaneous urticaria (CSU). The definition of a positive BAT is directly dependent on the reference range and the cutoff values established in control populations. As of now, the pediatric reference range and cutoff values of the CD63 BAT remain to be established. <b><i>Methods:</i></b> In this study, we analyzed CD63 expression in 80 children (1-17 years old) without chronic urticaria (i.e., controls) and compared the values to those of a pediatric cohort of 105 CSU patients and 23 physical urticaria (PU) patients. <b><i>Results:</i></b> Based on the log-normal distribution of CD63 values in control subjects, the reference range and the cutoff for positive CD63 BAT values was established to be 1.2-1.8% (95% CI) and 1.8%, respectively. Children with CSU showed significantly elevated and significantly increased BAT values compared to healthy controls (Wilcoxon rank test <i>p</i> value &lt;0.001). In contrast, no difference was found between BAT results in controls and PU patients. In pediatric CSU patients, a higher disease activity was associated with higher BAT values. <b><i>Conclusions:</i></b> Our study provides, for the first time, reference and cutoff values for the CD63 BAT in children. Our findings show that positive CD63 BAT are common in children with CSU and linked to a high disease activity.
DOI: 10.17632/ncp8y5bhkb
title: Data for: Kinetics of mace (Myristicae arillus) essential oil extraction using microwave assisted hydrodistillation: effect of microwave power

description: This research aims to investigate the effect of HD and MAHD methods on mace essential oil yields, compositions, and extraction kinetic using diffusion-controlled model. In the extraction using MAHD, the effect of power was also investigated. The diffusion process of mace essential oil in solid was approached using Fick’s theory. Therefore, diffusion coefficient (De), which can be used to design industries with good operationals can be obtained. On top of that, the correlation between power and diffusion coefficient was also investigated. The mass balance equation of mace essential oil is assumed that the extracted particles’ shape is circle. In this research, data on essential oil fraction (xdata) will be obtained. This data was obtained after the mace was degraded, so that the essential oil can diffuse out. The time needed for degradation until the essential oil diffused out for the first time was called tdeg. Consequently, in the calculation, the time value (t) must be corrected into tdata - tdeg. The values of tdeg and β were calculated continuously until the desired essential oil fraction (xcal) was obtained. To make it more systematic, trial and error processes were done using a solver tool on Microsoft Excel to get minimum Sum of Square of Errors (SSE). Based on the previous explanation, diffusion coefficient (De) is influenced by temperature, or in other words, by the microwave power used. In this research, the effect of power on diffusion will be correlated with empirical equation. Diffusion-controlled model can describe essential oils extraction mechanism using HD and MAHD methods. The calculation only used the data when the essential oil has not been in the constant volume. The calculation result showed that time of mace degradation (tdeg), so the essential oil can diffuse out in the extraction using HD (22.42 min) was very long compared to using MAHD (2.8–8.24 min). The time of cell wall degradation in essential oil extraction of mace uses MAHD at 300, 600, and 800 W at 8.24, 3.97, and 2.8 min, respectively. These results indicated that microwave degrades oil cell walls faster than conventional heating equipment and the higher the microwave power, the shorter the cell wall degradation time. In addition, the calculation result showed that the diffusion coefficient (De) of mace extraction using HD is less than the one using MAHD. Therefore, that it can be concluded that that mass transfer of mace essential oil extraction using HD is lower than the extraction done using MAHD. In addition, the higher the power used, the higher the diffusion will be. This means that the extraction process will be faster. The correlation equation of De versus P can be expressed by De = 3.02 x 10^(-15) x P^0.5985)
DOI: 10.4121/uuid:14d21609-8f4b-4321-b766-7cac0a4c2304
title: Data accompanying the research on Emotional user engagement of a food reporting game-based mobile app

description: The study aimed to investigate the long term impact of experiences in user engagement of a food reporting mobile game app. The study recruited 10 participants, with 8 being able to complete the study. The period consider at least 6 weeks of continuous use of the DigestInn application. A one year licence of the DigestInn mobile app was given for free to each participant. A mixed dataset was collected: Daily mood reporting: Experience Sampling Method [1] was used to sample daily participants' mood towards their experience using the application. Whatsapp [2] and the visual Pick-A-Mood tool [3] were used to prompt participants daily. Weekly user engagement reporting: a user engagement scale was used and adjusted for this purpose [4]. The survey was implemented in TypeForm [5]. The prompt/reminder was done through whatsapp via a visual summary of the mood reporting, based on Daily reconstruction method [6] 6 weeks interviews: individual interviews were conducted in person and via Skype. Focus group were conducted in the establishment of Arhnem-Nijmegen Applied Science University. In all cases visual prompts of food and mood reports were presented as probes [6] Raw data was processed for analysis. Coded transcripts: two students assistant and a code manager processed the transcripts using the software Atlas.ti [7] version 8.4.4. A coding scheme was initially developed, code manager trained the student assistant till a higher than .9 interrelated coder was achieved [8] Parsed json files: a json file containing the complete dataset of the complete study period was parsed to extract each participants food reports during. First the file was split in 8 files (one for each participant). A python program and a bash script were developed in Mac OSX to parse the json files into .csv files. In excel, .csv files were parsed by means of two Visual Basic macros to obtain a tabular view of the food reports per participant. [1] Larson, R., & Csikszentmihalyi, M. (2014). The experience sampling method. In Flow and the foundations of positive psychology (pp. 21-34). Springer, Dordrecht. [2] https://www.whatsapp.com [3] Desmet, P., Vastenburg, M., and Romero, N. (2016) Mood measurement with Pick-A-Mood: review of current methods and design of a pictorial self-report scale. Journal Design Research, 14 (3), pp. 241-279 [4] O’Brien, H. L., Cairns, P., & Hall, M. (2018). A practical approach to measuring user engagement with the refined user engagement scale (UES) and new UES short form. International Journal of Human-Computer Studies, 112, 28-39 [5] https://www.typeform.com/ [6] Kahneman, D., Krueger, A. B., Schkade, D. A., Schwarz, N., & Stone, A. A. (2004). A survey method for characterizing daily life experience: The day reconstruction method. Science, 306(5702), 1776-1780. [7] Atlas.ti [8] Miles, M. B., & Huberman, A. M. (1994). Qualitative data analysis: An expanded sourcebook. sage.
DOI: 10.6084/m9.figshare.21175492.v4
title: Soil biodiversity supports the delivery of multiple ecosystem functions in urban greenspaces

description: This excel file includs soil biodiversity across biomes, plant diversity, and the  microbial functional traits, and also includs multiple ecosystem functions.
DOI: 10.6084/m9.figshare.22691311.v2
title: Untitled Item

description: The MIDOG++ dataset represents an extension of the data set used in the MIDOG 2021 and 2022 challenges. We provide region of interest images from 503 histological specimens of seven different tumor types with variable morphology: breast carcinoma, lung carcinoma, lymphosarcoma, neuroendocrine tumor, cutaneous mast cell tumor, cutaneous melanoma, and (sub)cutaneous soft tissue sarcoma. The human and canine samples were processed and stained at different human and veterinary pathology laboratories with standard H&E dye and digitized with different digital whole slide image scanners. We provide labels for 11,937 mitotic figures that have been differentiated against 14,351 imposter cells in a blinded consensus by two pathologists and a final decision by a third pathologist for disagreed labels.
DOI: 10.6084/m9.figshare.27198918.v1
title: Raw Data Sheets

description: Raw data set of the audits
DOI: 10.6084/m9.figshare.3511682.v1
title: Appendix A. A color photograph showing two monarch subspecies, Danaus plexippus plexippus in North America and D. plexippus megalippe in the Caribbean and northern South America (both collected in Cuba).

description: A color photograph showing two monarch subspecies, Danaus plexippus plexippus in North America and D. plexippus megalippe in the Caribbean and northern South America (both collected in Cuba).
DOI: 10.6084/m9.figshare.7477772.v1
title: Data set for Belvedere et al., 2019. Late Jurassic globetrotters compared: A closer look at large and giant theropod tracks of North Africa and Europe. Journal of African Earth Sciences

description: Orginal 3D models (.ply) and point coulds of the tracks scaled at FL=1 m (.asc) used for the morphological comparisons in Belvedere et al., 2019. Late Jurassic globe trotters compared. A closer look at large and gigantic theropod tracks of North Africa and Europe. Journal of African Earth Sciences.
DOI: 10.17632/jnycfwpw3t
title: BMI and Vitiligo

description: Supplemental Table 1: BMI and Vitiligo
DOI: 10.17632/sf2b4vdffg
title: Data for: Bioavailable 87Sr/86Sr in European soils: a baseline for provenancing studies
DOI: 10.6084/m9.figshare.11912367.v1
title: Supplementary Material for: Saliva for Assessing Vitamin A Status in Extremely Preterm Infants: A Diagnostic Study

description: <b><i>Background:</i></b> Salivary measurement of hormones and vitamins is gaining prominence as a minimally invasive procedure with the negligible potential for harm. We aimed to assess the utility of saliva for assessing vitamin A status in extremely preterm infants. <b><i>Methods:</i></b> Paired saliva and blood samples were collected at 4 weeks of age from infants born &lt;28 weeks of gestation using a proprietary polymer swab. Plasma retinol was measured using high-performance liquid chromatography, and salivary retinol was measured using enzyme-linked immunosorbent assay. <b><i>Results:</i></b> Thirty infants were recruited with a median (IQR) gestation and birth weight of 26.2 weeks (24.8–27.2) and 865 g (718–1,002), respectively. An adequate volume of saliva (&gt;50 µL) was obtained in 68%. There was no significant correlation (Spearman’s correlation coefficient = 0.16, <i>p</i> = 0.3) between individual plasma and salivary retinol levels. Bland-Altman analysis showed wide limits of agreement (–113 to +119%) between individual plasma and salivary retinol levels. <b><i>Conclusion:</i></b> Individual vitamin A status cannot be determined reliably from saliva in extremely preterm infants using current collection materials and analysis techniques.
DOI: 10.6084/m9.figshare.25637862.v8
title: <b>Data for "Evolution of the subcontinental lithospheric mantle beneath </b><b>accretionary orogens</b><b>: implications for the stabilization of cratons"</b>

description: This file includes Supplementary Tables S1 to S5 for the publication "Evolution of the subcontinental lithospheric mantle beneath accretionary orogens: implications for the stabilization of cratons" (submitted to Earth and Planetary Science Letters in July 2024).<br>Table S1. Petrography, major element compositions, pressure-temperature, and densities of xenoliths.<br>Table S2. Mineral major element compositions.<br>Table S3. Whole-rock HSE abundances and Re-Os isotope compositions.<br>Table S4. Mineral trace element concentrations.Table S5. WR major element compositions, pressure-temperature, lithospheric thickness in references
DOI: 10.6084/m9.figshare.29070395.v1
title: failure_qual.data_figshare

description: 30 medical students from the University of Basel participated in a 16-hour workshop entitled ‘How Physicians Deal with Failure in Medicine’. Two senior surgeons and a life and leadership coach facilitated the workshop between August 2021 and February 2022, aiming to enable medical learners to reflect on failure and develop useful coping strategies. The authors used a directed qualitative content analysis to analyze pre- and post-workshop reflective essays from the workshop participants.
DOI: 10.6084/m9.figshare.29125724.v1
title: Genome annotation data of Qiancha 1 (QC1) tea cultivar

description: The genome annotation data of Qiancha 1 (QC1) tea cultivar. The genome sequencing data of this cultivar has been made available in the National Genomics Data Center (https://ngdc.cncb.ac.cn/) under project number PRJCA028918. Related papers have been published in Horticultural Research (DOI:10.1093/hr/uhaf064).
DOI: 10.6084/m9.figshare.5123539.v1
title: Supplementary Material for: The Technology – Activities of Daily Living Questionnaire: A Version with a Technology-Related Subscale

description: <b><i>Background:</i></b> Information and communication technology (ICT) has become an increasingly important part of daily life. The ability to use technology is becoming essential for autonomous functioning in society. Current functional scales for patients with cognitive impairment do not evaluate the use of technology. The objective of this study was to develop and validate a new version of the Activities of Daily Living Questionnaire (ADLQ) that incorporates an ICT subscale. <b><i>Method:</i></b> A new technology-based subscale was incorporated into the Spanish version of the ADLQ (SV-ADLQ), entitled the Technology version of the ADLQ (T-ADLQ). The T-ADLQ was administered to 63 caregivers of dementia patients, 21 proxies of mild cognitive impairment patients and 44 proxies of normal elderly subjects (mean age of the sample ± SD: 73.5 ± 8.30 years). We analysed the convergent validity, internal consistency, reliability cut-off point, sensitivity and specificity of the T-ADLQ. The results of the T-ADLQ were compared to the SV-ADLQ. <b><i>Results:</i></b> The T-ADLQ showed significant correlations with the Mini-Mental State Examination (MMSE), the Frontal Assessment Battery (FAB) as well as other measures of functional impairment and dementia severity (MMSE: r = –0.70; FAB: r = –0.65; Functional Assessment Questionnaire: r = 0.77; Instrumental Activities of Daily Living Scale: r = –0.75; Clinical Dementia Rating Scale: r = 0.72; p &lt; 0.001). The T-ADLQ showed a good reliability with a relatively high Cronbach’s α-coefficient (Cronbach’s α = 0.861). When considering a functional impairment cut-off point greater than 29.25%, the sensitivity and specificity of the T-ADLQ were 82 and 90%, respectively. The area under the receiver-operating characteristic curve was 0.937 for the T-ADLQ and 0.932 for the original version of the test. <b><i>Conclusions:</i></b> The T-ADLQ revealed adequate indicators of validity and reliability for the functional assessment of activities of daily living in dementia patients. However, the inclusion of technology items in the T-ADLQ did not improve the performance of the scale, which may reflect the lack of widespread use of technology by elderly individuals. Thus, although it appeared reasonable to add technology use questions to the ADLQ, our experience suggested that this has to be done cautiously, since the sensitivity of these additional items could vary in different populations. The T-ADLQ needs to be validated in a different population of dementia subjects.
DOI: 10.6084/m9.figshare.9924662.v2
title: Data to reproduce R codes

description: Contains the variables required to reproduce results from "Complementarity effects are strengthened by competition intensity and global environmental change in the central boreal forests of Canada.". Columns included, in order: Unique Plot Identification, unique tree identification,species of the tree, shade tolerance of the tree, growth from prior interval of the tree, competition experienced by the tree, middle year of measurement period, phylogenetic dissimilarity to neighbours on a 12.6m radius, phylogenetic dissimilarity to neighbours on a 10m radius, shade tolerance dissimilarity to neighbours on a 12.6m radius, shade tolerance dissimilarity to neighbours on a 10m radius, age, atmospheric CO2 for census period, annual temperature anomaly for census period, and standardised precipitation-evapotranspiration index for census period.
DOI: 10.6084/m9.figshare.21228641.v1
title: Supplementary Material for: Investigating the Link between Later-Life Brain Volume and Cardiorespiratory Fitness after Mild Traumatic Brain Injury Exposure

description: <b><i>Introduction:</i></b> Evidence suggests that maintaining a higher level of cardiorespiratory fitness (CRF) later in life can offer some protection against brain volume loss as we age. By contrast, mild traumatic brain injury (mTBI) could accelerate age-related cortical atrophy. The current study sought to examine whether variations in the CRF level modified the association between mTBI history and brain volumetric measures in a sample of older adults. <b><i>Methods:</i></b> Seventy-nine community-dwelling older adults (mean age 68.7 ± 4.3 years, 54.4% female) were assessed for their mTBI history: 25 participants (32%) reported sustaining at least one lifetime mTBI. Participants also underwent a CRF assessment and magnetic resonance imaging (MRI) to obtain global and region-of-interest volumes. <b><i>Results:</i></b> Analysis of covariance, controlling for age, sex, education, and apolipoprotein <i>(APOE)</i> ε4 allele carriage, revealed that participants with a history of mTBI had a significantly larger total mean grey matter volume (582.21 ± 12.46 cm<sup>3</sup>) in comparison to participants with no mTBI history (571.08 ± 17.21 cm<sup>3</sup>, <i>p =</i> 0.01 after correction for multiple comparisons). However, no differences between groups based on mTBI history were found for total white matter volume or in any other cortical or subcortical structures examined. A subsequent moderation analysis found that CRF was predominantly non-influential on the association between mTBI history and the MRI-quantified measures of brain volume. <b><i>Conclusion:</i></b> While unexpected, the findings suggest that a history of mTBI can lead to grey matter alterations in the ageing brain. However, concurrent variations in the CRF level did not influence the differences in brain volume found based on mTBI exposure status.
DOI: 10.6084/m9.figshare.21350607.v1
title: GCC model data and xyz files

description: Contents: catalyst_data.csv file contains all the features and targets for machine learning model training. The column "Catalyst Name" has a character string that is used as the prefix for the xyz files of the corresponding catalyst. The feature and target columns are explained in the paper and the supporting information. <br> catalystonly-xyzfiles is a directory that contains xyz files for all of the catalysts in this work <br> intermediates_xyz contains xyz files for all of the catalysts in this work with each of the intermediates bound throughout the catalytic cycle
DOI: 10.6084/m9.figshare.27175959.v1
title: <b><i>Ramularia</i></b><b> species on trees and shrubs</b>

description: <i>Ramularia</i> is a species-rich genus in the order <i>Mycosphaerellales </i>(<i>Dothideomycetes</i>, <i>Ascomycota</i>) that includes numerous phytopathogenic taxa which cause typical leaf spots, necrosis, or chlorosis on woody and herbaceous plants.