cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17200507
title: Nuclear receptor binding SET domain protein 1 promotes epithelial-mesenchymal transition in paclitaxel-resistant breast cancer cells via regulating nuclear factor kappa B and F-box and leucine-rich repeat protein 11

description: Breast cancer (BC) is regarded as the major cause of cancer-associated deaths in women. Paclitaxel exerts a critical impact on the chemotherapy of BC, but the resistance to paclitaxel becomes a great obstacle in treating the disease. It is reported that noncoding RNA nuclear receptor binding SET domain protein 1 (NSD1) plays a significant role in drug resistance; however, the special role of NSD1 in paclitaxel-resistant BC is unclear. Human BC cell line MCF-7 was used to establish paclitaxel-resistant BC cells (MCF-7/PR). Reverse transcription quantitative polymerase chain reaction (RT-qPCR) displayed that NSD1 and F-box and leucine-rich repeat protein 11 (FBXL11) were highly expressed in BC tissues. Western blotting was utilized for protein level assessment. Cell counting kit-8 (CCK-8), Transwell, wound healing assays, and animal experiments were conducted to examine the influence of NSD1 or FBXL11 on the malignant behaviors of BC <i>in vitro</i> and <i>in vivo</i>, respectively. Transfected MCF-7/PR cells were injected subcutaneously into BALB/c nude mice with or without treatment of paclitaxel. The nuclear factor kappa B (NF-kB) activity was evaluated by the luciferase reporter assay. Results showed that NSD1 knockdown inhibited the epithelial-mesenchymal transition (EMT), migration and invasiveness of BC <i>in vitro</i>, which was rescued by FBXL11 overexpression. Furthermore, NSD1 silencing promoted paclitaxel sensitivity of paclitaxel-resistant BC cells and suppressed tumor growth and paclitaxel resistance <i>in vivo</i>. NSD1 knockdown reduced NF-kB activity, while FBXL11 inhibition markedly increased NF-kB activity. Collectively, NSD1 facilitates the EMT, migration and invasion in paclitaxel-resistant BC cells via regulating NF-kB and FBXL11.
DOI: 10.6084/m9.figshare.17200507.v1
title: Nuclear receptor binding SET domain protein 1 promotes epithelial-mesenchymal transition in paclitaxel-resistant breast cancer cells via regulating nuclear factor kappa B and F-box and leucine-rich repeat protein 11

description: Breast cancer (BC) is regarded as the major cause of cancer-associated deaths in women. Paclitaxel exerts a critical impact on the chemotherapy of BC, but the resistance to paclitaxel becomes a great obstacle in treating the disease. It is reported that noncoding RNA nuclear receptor binding SET domain protein 1 (NSD1) plays a significant role in drug resistance; however, the special role of NSD1 in paclitaxel-resistant BC is unclear. Human BC cell line MCF-7 was used to establish paclitaxel-resistant BC cells (MCF-7/PR). Reverse transcription quantitative polymerase chain reaction (RT-qPCR) displayed that NSD1 and F-box and leucine-rich repeat protein 11 (FBXL11) were highly expressed in BC tissues. Western blotting was utilized for protein level assessment. Cell counting kit-8 (CCK-8), Transwell, wound healing assays, and animal experiments were conducted to examine the influence of NSD1 or FBXL11 on the malignant behaviors of BC <i>in vitro</i> and <i>in vivo</i>, respectively. Transfected MCF-7/PR cells were injected subcutaneously into BALB/c nude mice with or without treatment of paclitaxel. The nuclear factor kappa B (NF-kB) activity was evaluated by the luciferase reporter assay. Results showed that NSD1 knockdown inhibited the epithelial-mesenchymal transition (EMT), migration and invasiveness of BC <i>in vitro</i>, which was rescued by FBXL11 overexpression. Furthermore, NSD1 silencing promoted paclitaxel sensitivity of paclitaxel-resistant BC cells and suppressed tumor growth and paclitaxel resistance <i>in vivo</i>. NSD1 knockdown reduced NF-kB activity, while FBXL11 inhibition markedly increased NF-kB activity. Collectively, NSD1 facilitates the EMT, migration and invasion in paclitaxel-resistant BC cells via regulating NF-kB and FBXL11.
DOI: 10.6084/m9.figshare.7239056
title: Additional file 7: of Metastatic breast cancer cells overexpress and secrete miR-218 to regulate type I collagen deposition by osteoblasts

description: Table S5. Gene expression in MDA-231-miR-218 and MDA-231-miR-ctrl cells. (XLSX 1093 kb)
DOI: 10.6084/m9.figshare.7239056.v1
title: Additional file 7: of Metastatic breast cancer cells overexpress and secrete miR-218 to regulate type I collagen deposition by osteoblasts

description: Table S5. Gene expression in MDA-231-miR-218 and MDA-231-miR-ctrl cells. (XLSX 1093 kb)
DOI: 10.6084/m9.figshare.16652943
title: Ionic conductive gels based on deep eutectic solvents

description: Ionic conductive gels are promising soft conductors for stretchable and flexible electronics. Unfortunately, the basic requirements for an ideal ionic conductive gel, including environmental and chemical stability as well as low toxicity and low cost do not usually coincide in one material. Here we report an ionic conductive gel containing deep eutectic solvents (DES), which are specialized ionic liquids composed of propylene glycol (PG, hydrogen bonding donor) and various salts. In experiments, the DES-gel loses about 10% of the original weight in dry air (5– 9% relative humidity) for 7 days and its conductivity remains unaltered. Comparing to regular salt-containing hydrogels, it exhibits exceptional resistance to metal corrosion. We demonstrate the advantage of DES-gels as the ionic electrode in a flexible and stretchable electroluminescent device, especially in cold environment (−20°C). Through this study, we discover a new candidate for cheap and safe soft ionic conductors with excellent environmental and chemical stability.
DOI: 10.6084/m9.figshare.16652943.v2
title: Ionic conductive gels based on deep eutectic solvents

description: Ionic conductive gels are promising soft conductors for stretchable and flexible electronics. Unfortunately, the basic requirements for an ideal ionic conductive gel, including environmental and chemical stability as well as low toxicity and low cost do not usually coincide in one material. Here we report an ionic conductive gel containing deep eutectic solvents (DES), which are specialized ionic liquids composed of propylene glycol (PG, hydrogen bonding donor) and various salts. In experiments, the DES-gel loses about 10% of the original weight in dry air (5– 9% relative humidity) for 7 days and its conductivity remains unaltered. Comparing to regular salt-containing hydrogels, it exhibits exceptional resistance to metal corrosion. We demonstrate the advantage of DES-gels as the ionic electrode in a flexible and stretchable electroluminescent device, especially in cold environment (−20°C). Through this study, we discover a new candidate for cheap and safe soft ionic conductors with excellent environmental and chemical stability.
DOI: 10.6084/m9.figshare.16652943.v1
title: Ionic conductive gels based on deep eutectic solvents

description: Ionic conductive gels are promising soft conductors for stretchable and flexible electronics. Unfortunately, the basic requirements for an ideal ionic conductive gel, including environmental and chemical stability as well as low toxicity and low cost do not usually coincide in one material. Here we report an ionic conductive gel containing deep eutectic solvents (DES), which are specialized ionic liquids composed of propylene glycol (PG, hydrogen bonding donor) and various salts. In experiments, the DES-gel loses about 10% of the original weight in dry air (5– 9% relative humidity) for 7 days and its conductivity remains unaltered. Comparing to regular salt-containing hydrogels, it exhibits exceptional resistance to metal corrosion. We demonstrate the advantage of DES-gels as the ionic electrode in a flexible and stretchable electroluminescent device, especially in cold environment (−20°C). Through this study, we discover a new candidate for cheap and safe soft ionic conductors with excellent environmental and chemical stability.
DOI: 10.6084/m9.figshare.16676259
title: Graded Growth-Mathematica Code-Liu-Liu-Cai-PRSA-2021.nb from Influence of the growth gradient on surface wrinkling and pattern transition in growing tubular tissues

description: Mathematica Code for obtaining all figures
DOI: 10.6084/m9.figshare.16676259.v1
title: Graded Growth-Mathematica Code-Liu-Liu-Cai-PRSA-2021.nb from Influence of the growth gradient on surface wrinkling and pattern transition in growing tubular tissues

description: Mathematica Code for obtaining all figures
DOI: 10.6084/m9.figshare.8287661
title: Phylogeography of Y-chromosome haplogroup Q1a1a-M120, a paternal lineage connecting populations in Siberia and East Asia

description: <b>Background:</b> Previous studies have suggested that the human Y-chromosome haplogroup Q1a1a-M120, a widespread paternal lineage in East Asian populations, originated in South Siberia. However, much uncertainty remains regarding the origin, diversification, and expansion of this paternal lineage. <b>Aim:</b> To explore the origin and diffusion of paternal Q-M120 lineages in East Asia. <b>Subjects and methods:</b> The authors generated 26 new Y chromosome sequences of Q-M120 males and co-analysed 45 Y chromosome sequences of this haplogroup. A highly-revised phylogenetic tree of haplogroup Q-M120 with age estimates was reconstructed. Additionally, a comprehensive phylogeographic analysis of this lineage was performed including 15,007 samples from 440 populations in eastern Eurasia. <b>Results:</b> An ancient connection of this lineage with populations in Siberia was revealed. However, this paternal lineage experienced an <i>in-situ</i> expansion between 5000 and 3000 years ago in northwestern China. Ancient populations with high frequencies of Q-M120 were involved in the formation of ancient Huaxia populations before 2000 years ago; this haplogroup eventually became one of the founding paternal lineages of modern Han populations. <b>Conclusion:</b> This study provides a clear pattern of the origin and diffusion process of haplogroup Q1a1a-M120, as well as the role of this paternal lineage during the formation of ancient Huaxia populations and modern Han populations.
DOI: 10.6084/m9.figshare.8287661.v2
title: Phylogeography of Y-chromosome haplogroup Q1a1a-M120, a paternal lineage connecting populations in Siberia and East Asia

description: <b>Background:</b> Previous studies have suggested that the human Y-chromosome haplogroup Q1a1a-M120, a widespread paternal lineage in East Asian populations, originated in South Siberia. However, much uncertainty remains regarding the origin, diversification, and expansion of this paternal lineage. <b>Aim:</b> To explore the origin and diffusion of paternal Q-M120 lineages in East Asia. <b>Subjects and methods:</b> The authors generated 26 new Y chromosome sequences of Q-M120 males and co-analysed 45 Y chromosome sequences of this haplogroup. A highly-revised phylogenetic tree of haplogroup Q-M120 with age estimates was reconstructed. Additionally, a comprehensive phylogeographic analysis of this lineage was performed including 15,007 samples from 440 populations in eastern Eurasia. <b>Results:</b> An ancient connection of this lineage with populations in Siberia was revealed. However, this paternal lineage experienced an <i>in-situ</i> expansion between 5000 and 3000 years ago in northwestern China. Ancient populations with high frequencies of Q-M120 were involved in the formation of ancient Huaxia populations before 2000 years ago; this haplogroup eventually became one of the founding paternal lineages of modern Han populations. <b>Conclusion:</b> This study provides a clear pattern of the origin and diffusion process of haplogroup Q1a1a-M120, as well as the role of this paternal lineage during the formation of ancient Huaxia populations and modern Han populations.
DOI: 10.6084/m9.figshare.8287661.v1
title: Phylogeography of Y-chromosome haplogroup Q1a1a-M120, a paternal lineage connecting populations in Siberia and East Asia

description: <b>Background:</b> Previous studies have suggested that the human Y-chromosome haplogroup Q1a1a-M120, a widespread paternal lineage in East Asian populations, originated in South Siberia. However, much uncertainty remains regarding the origin, diversification, and expansion of this paternal lineage. <b>Aim:</b> To explore the origin and diffusion of paternal Q-M120 lineages in East Asia <b>Subjects and methods</b>: We generated 26 new Y chromosome sequences of Q-M120 males and co-analysed 45 Y chromosome sequences of this haplogroup. We reconstructed a highly revised phylogenetic tree of haplogroup Q-M120 with age estimates. Additionally, we performed a comprehensive phylogeographic analysis of this lineage including 15,007 samples from 440 populations in eastern Eurasia. <b>Results</b>: We revealed an ancient connection of this lineage with populations in Siberia. However, this paternal lineage experienced an <i>in-situ</i> expansion between 5,000 and 3,000 years ago in northwestern China. Ancient populations with high frequencies of Q-M120 were involved in the formation of ancient Huaxia populations before 2,000 years ago; this haplogroup eventually became one of the founding paternal lineages of modern Han populations. <b>Conclusion</b>: We provided a clear pattern about the origin and diffusion process of haplogroup Q1a1a-M120, as well as the role of this paternal lineage during the formation of ancient Huaxia populations and modern Han populations.
DOI: 10.6084/m9.figshare.24540629
title: Additional file 10 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 10: Supplementary Table S1. Differential expression of RNA modifying proteins in human Pca.
DOI: 10.6084/m9.figshare.24540629.v1
title: Additional file 10 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 10: Supplementary Table S1. Differential expression of RNA modifying proteins in human Pca.
DOI: 10.6084/m9.figshare.19297751
title: fig5.csv

description: Supplementary materials for the Fig.7 of Improving Generalization of Glaucoma Detection on Fundus Images via Feature Alignment between Augmented Views
DOI: 10.6084/m9.figshare.19297751.v1
title: fig5.csv

description: Supplementary materials for the Fig.7 of Improving Generalization of Glaucoma Detection on Fundus Images via Feature Alignment between Augmented Views
DOI: 10.6084/m9.figshare.24540632
title: Additional file 11 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 11: Supplementary Table S2. METTL1 bound RNAs in PC3 cells.
DOI: 10.6084/m9.figshare.24540632.v1
title: Additional file 11 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 11: Supplementary Table S2. METTL1 bound RNAs in PC3 cells.
DOI: 10.6084/m9.figshare.19297754
title: table7.csv

description: Supplementary materials for the Tab. 7 of Improving Generalization of Glaucoma Detection on Fundus Images via Feature Alignment between Augmented Views
DOI: 10.6084/m9.figshare.19297754.v1
title: table7.csv

description: Supplementary materials for the Tab. 7 of Improving Generalization of Glaucoma Detection on Fundus Images via Feature Alignment between Augmented Views
DOI: 10.6084/m9.figshare.24540635
title: Additional file 12 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 12: Supplementary Table S3. METTL1 bound RNAs in HEK293T cells.
DOI: 10.34740/kaggle/dsv/7688198
title: crypto-data-daily-updates
DOI: 10.6084/m9.figshare.25282330
title: Data files

description: Data files that support the publication "Interpersonal violence from others’ alcohol use: a systematic review and modelling study to estimate the national and regional prevalence" by Kilian, Klinger, Manthey, Rehm, Huckle, & Probst. Data on interpersonal violence from others' alcohol use was obtained through systematic literature review. Methods are described in the publication.
DOI: 10.6084/m9.figshare.25282330.v1
title: Data files

description: Data files that support the publication "Interpersonal violence from others’ alcohol use: a systematic review and modelling study to estimate the national and regional prevalence" by Kilian, Klinger, Manthey, Rehm, Huckle, & Probst. Data on interpersonal violence from others' alcohol use was obtained through systematic literature review. Methods are described in the publication.
DOI: 10.6084/m9.figshare.24540635.v1
title: Additional file 12 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 12: Supplementary Table S3. METTL1 bound RNAs in HEK293T cells.
DOI: 10.6084/m9.figshare.21394908
title: WES data from 286 diffuse gliomas under the 2021 WHO Classification of Tumors of the Central Nervous System

description: The output table with called SNVs per sample
DOI: 10.6084/m9.figshare.19297757
title: fig7.csv

description: Supplementary materials for the Fig.7 of Improving Generalization of Glaucoma Detection on Fundus Images via Feature Alignment between Augmented Views
DOI: 10.6084/m9.figshare.19297757.v1
title: fig7.csv

description: Supplementary materials for the Fig.7 of Improving Generalization of Glaucoma Detection on Fundus Images via Feature Alignment between Augmented Views
DOI: 10.6084/m9.figshare.24540638
title: Additional file 13 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 13: Supplementary Table S4. tRNA fragment reads in Control (wt) and METTL1 KO cells.
DOI: 10.6084/m9.figshare.24540638.v1
title: Additional file 13 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 13: Supplementary Table S4. tRNA fragment reads in Control (wt) and METTL1 KO cells.
DOI: 10.6084/m9.figshare.24540641
title: Additional file 14 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 14: Supplementary Table S5. Differentially synthesised nascent peptides in WT and METTL1 KO PC3 cells.
DOI: 10.6084/m9.figshare.24540641.v1
title: Additional file 14 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 14: Supplementary Table S5. Differentially synthesised nascent peptides in WT and METTL1 KO PC3 cells.
DOI: 10.6084/m9.figshare.21394914
title: Preparation of high concentration coal water slurry with good fluidity based on preferentially modified ultrafine particle under three-peak grading

description: Coal water slurry (CWS) with high solid content and good fluidity is critical to efficient gasification and pipeline transport. The large number of oxygen-containing functional groups on the surface of the coal particles allow a large amount of water to be bound to the surface, resulting in a decrease in free water and an increase in apparent viscosity. Surface modification using the suspension of the second fluid and the second particle can reduce the viscosity and improve fluidity, since the oil film layer on the surface of the particles can cover the oxygen-containing functional groups and improve the hydrophobicity. Three-peak grading reduces viscosity by increasing the accumulation efficiency of particles. Preferentially modified the ultrafine particles under three-peak grading was found to result in the greatest decrease in viscosity and the most significant increase in fluidity. It not only helps to improve the accumulation efficiency, but the elastic oil film layer on the surface like an “air cushion” to reduce the frictional resistance between the particles, which effectively improved the fluidity of CWS. Ultimately, preferentially modified ultrafine particles under three-peak grading increased the slurry concentration from 62.0 wt% to 69.0 wt%, and it still had good fluidity with fluidity grade A + .
DOI: 10.6084/m9.figshare.21394914.v1
title: Preparation of high concentration coal water slurry with good fluidity based on preferentially modified ultrafine particle under three-peak grading

description: Coal water slurry (CWS) with high solid content and good fluidity is critical to efficient gasification and pipeline transport. The large number of oxygen-containing functional groups on the surface of the coal particles allow a large amount of water to be bound to the surface, resulting in a decrease in free water and an increase in apparent viscosity. Surface modification using the suspension of the second fluid and the second particle can reduce the viscosity and improve fluidity, since the oil film layer on the surface of the particles can cover the oxygen-containing functional groups and improve the hydrophobicity. Three-peak grading reduces viscosity by increasing the accumulation efficiency of particles. Preferentially modified the ultrafine particles under three-peak grading was found to result in the greatest decrease in viscosity and the most significant increase in fluidity. It not only helps to improve the accumulation efficiency, but the elastic oil film layer on the surface like an “air cushion” to reduce the frictional resistance between the particles, which effectively improved the fluidity of CWS. Ultimately, preferentially modified ultrafine particles under three-peak grading increased the slurry concentration from 62.0 wt% to 69.0 wt%, and it still had good fluidity with fluidity grade A + .
DOI: 10.6084/m9.figshare.24540644
title: Additional file 15 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 15: Supplementary Table S6. Differentially expressed proteins in WT and METTL1 KO PC3 cells.
DOI: 10.6084/m9.figshare.24540644.v1
title: Additional file 15 of METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer

description: Additional file 15: Supplementary Table S6. Differentially expressed proteins in WT and METTL1 KO PC3 cells.
DOI: 10.6084/m9.figshare.19297766
title: Scenario-Based Robust Remanufacturing Scheduling Problem Using Improved Biogeography-Based Optimization Algorithm

description: This is the experimental data of the manuscript entitled “Scenario-Based Robust Remanufacturing Scheduling Problem Using Improved Biogeography-Based Optimization Algorithm ”. All data are generated through computer simulation and saved in the file with csv format. The first folder "1.SRRSP benchmark problem instances" includes 21SRRSP benchmark problem instances, the second folder "2.Additional data used to verify the practicability of considering multiple scenarios" contains the addition data required to demonstrate the practicability of considering multiple scenarios, the third folder "3.Additional data used to verify the practicability of variable start-up batch size constraint" contains the the addition data required to demonstrate the practicability of variable start-up batch size constraint. These datasets show the number of scenarios, the number of remanufacturing jobs, the number of operations for each job, the number of remanufacturing machines, the maximum batch size of batch processing machines, and the minimum batch size of batch processing machines. The value of variance factor, the probability of the occurrence of each scenario, the index of the batch processing machine, the index of the batch processing operation, the arrival time of each remanufacturing job, the set of machines available for each operation, and the processing time of each operation on the available machines are also shown in the datasets. And the fourth folder "4.The standard for generating the arrival time and processing time of EOL products in each scenario in each instances" contains the standard used to generate the arrival time and processing time of EOL products in each scenario in each instances.