cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25572605.v1
title: Additional file 1 of Csn5 inhibits autophagy by regulating the ubiquitination of Atg6 and Tor to mediate the pathogenicity of Magnaporthe oryzae

description: Additional file 1: Figure S1. Verification of deletion mutants by PCR and quantitative real-time PCR. (A) Rice blast fungus knockout model. (B) PCR detection was performed on the null mutants, and the recombinant fragment (LF) was cloned from the positive strain but not from the WT strain. The 500-bp characteristic fragment (SF) of the target gene was cloned in the WT strain but not in the mutants. TUBULIN was used as a positive control. (C) The copy number of the resistance gene HPH in the deletion mutants was verified by quantitative real-time PCR. Figure S2. The targeted gene destruction of CSN subunits decreased the growth, sporulation, and pathogenicity of M. oryzae. (A) Colony morphology of 70-15, ΔMocsn1, Mocsn1-C, ΔMocsn2, Mocsn2-C, ΔMocsn3, Mocsn3-C, ΔMocsn4, Mocsn4-C, ΔMocsn7a, and Mocsn7a-C. The strains were grown on CM and MM plates for 9 days. (B) Statistical analysis of the colony growth diameter. The data were analyzed using GraphPad Prism 8.0 software. The error bars represent the standard deviations. ***P &lt; 0.001. (C) Conidiophores of 70-15, ΔMocsn1, Mocsn1-C, ΔMocsn2, Mocsn2-C, ΔMocsn3, Mocsn3-C, ΔMocsn4, Mocsn4-C, ΔMocsn7a, and Mocsn7a-C. The strains were cultivated in an incubator at 25 ℃ for 9 days and observed under an optical microscope. (D) Disease spots of detached barley leaves inoculated with mycelial plugs from 70-15, ΔMocsn1, Mocsn1-C, ΔMocsn2, Mocsn2-C, ΔMocsn3, Mocsn3-C, ΔMocsn4, Mocsn4-C, ΔMocsn7a, and Mocsn7a-C. Leaves were cultured at 25 ℃ for 4 days after inoculation. Figure S3. CSN subunits are involved in the regulation of autophagy in M. oryzae. (A) Yeast two-hybrid assays were used to detect the interactions between CSN subunits and Atg-related proteins. Pairs of pGBKT7-53 and PGADT7-T were used as positive controls. Yeast transformants carrying the indicated constructs were plated onto selective plates supplemented without Leu/Trp or Leu/Trp/His/Ade for growth assays. (B) Autophagic flux analysis of GFP-MoAtg8 in 70-15 and ΔMocsn1.Total GFP-MoAtg8 and free GFP were detected by western blotting. (C) Autophagic flux analysis of GFP-MoAtg8 in 70-15, ΔMocsn4 andΔMocsn7a. Figure S4. Identification of the Csn5 protein in rice blast fungus. (A) Comparison of Csn5 amino acid sequences in different eukaryotes via DNAMAN 8 software. The amino acid sequences used for comparison were from Magnaporthe oryzae (XP_003712833.1), Fusarium graminearum (XP_011318525.1), Mus musculus (NP_038743.1), Caenorhabditis elegans (NP_500841.1), Aspergillus fumigatus (XP_755961.2), Homo sapiens (NP_006828.2) and Neurospora crassa (XP_956786.1). (B) Phylogenetic trees of the Csn5 proteins constructed using MEGA 11. (C) Conserved MPN domain of Csn5 in different eukaryotes was identified using IBS 1.0.1 software.
DOI: 10.6084/m9.figshare.25572523
title: Additional file 1 of Genome-wide analysis and expression profiling of the HD-ZIP gene family in kiwifruit

description: Additional file 1: Table S1. Characteristics of kiwifruit HD-Zip genes. Table S2. Primers used for RT-PCR and qRT-PCR analysis.
DOI: 10.6084/m9.figshare.25572523.v1
title: Additional file 1 of Genome-wide analysis and expression profiling of the HD-ZIP gene family in kiwifruit

description: Additional file 1: Table S1. Characteristics of kiwifruit HD-Zip genes. Table S2. Primers used for RT-PCR and qRT-PCR analysis.
DOI: 10.15468/dl.hnd27e
title: Occurrence Download

description: A dataset containing 21968898 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "Year 2018-2024"
 ]
}

 The dataset includes 21968898 records from 1784 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072891-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27296991
title: Data for craters.xlsx

description: These data are used to investigate the potential factors that influence the gas blowout craters occurrence. we considered the 12 months preceding the gas blowout as a single year for analysis rather than using a calendar year.
DOI: 10.6084/m9.figshare.27296991.v5
title: Data for craters.xlsx

description: These data are used to investigate the potential factors that influence the gas blowout craters occurrence. we considered the 12 months preceding the gas blowout as a single year for analysis rather than using a calendar year.
DOI: 10.6084/m9.figshare.27296991.v4
title: Data for craters.xlsx

description: These data are used to investigate the potential factors that influence the gas blowout craters occurrence. we considered the 12 months preceding the gas blowout as a single year for analysis rather than using a calendar year.
DOI: 10.15468/dl.8tczfc
title: Occurrence Download

description: A dataset containing 51160 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lupinus polyphyllus Lindl.)",
 "Country is Sweden",
 "HasCoordinate is true",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 51160 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003258-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25446/oxford.28057742
title: Retro-digitised Enggano-German dictionary derived from Kähler’s (1987) “Enggano-Deutsches Wörterbuch”

description: How to citePlease cite the original dictionary and the dataset and code in this repository as follows:Kähler, Hans. (1987). <i>Enggano-Deutsches Wörterbuch</i> (Veröffentlichungen Des Seminars Für Indonesische Und Südseesprachen Der Universität Hamburg 14). Berlin; Hamburg: Dietrich Reimer Verlag. https://search.worldcat.org/title/18191699.Rajeg, Gede Primahadi Wijaya; Pramartha, Cokorda Rai Adi; Sarasvananda, Ida Bagus Gede; Widiatmika, Putu Wahyu; Segara, Ida Bagus Made Ari; Pita, Yul Fulgensia Rusman; et al. (2024). Retro-digitised Enggano-German dictionary derived from Kähler’s (1987) “Enggano-Deutsches Wörterbuch”. University of Oxford. Dataset. https://doi.org/10.25446/oxford.28057742OverviewThis is a hand-digitised Enggano-German Dictionary derived from Hans Kähler's (1987) “Enggano-Deutsches Wörterbuch”. We crowdsourced the digitisation process by transcribing the dictionary's content into an online database system; the system was set up by Cokorda Pramartha and I B. G. Sarasvananda in collaboration with the first author. The database is exported into a .csv file to be further processed computationally and manually, such as fixing typos and incorrect mapping of the entry element, providing the English and Indonesian translations, and standardising the orthography.A pre-release can be accessed here. The minor update in the current version includes adding a description of the column names for the tabular data of the digitised dictionary. The dictionary is stored as a table for three file types: .rds (for the R data format), .csv, and .tsv.Aspects to be worked out for the future development of the dataset can be accessed here.
DOI: 10.25446/oxford.28057742.v1
title: Retro-digitised Enggano-German dictionary derived from Kähler’s (1987) “Enggano-Deutsches Wörterbuch”

description: How to citePlease cite the original dictionary and the dataset and code in this repository as follows:Kähler, Hans. (1987). <i>Enggano-Deutsches Wörterbuch</i> (Veröffentlichungen Des Seminars Für Indonesische Und Südseesprachen Der Universität Hamburg 14). Berlin; Hamburg: Dietrich Reimer Verlag. https://search.worldcat.org/title/18191699.Rajeg, Gede Primahadi Wijaya; Pramartha, Cokorda Rai Adi; Sarasvananda, Ida Bagus Gede; Widiatmika, Putu Wahyu; Segara, Ida Bagus Made Ari; Pita, Yul Fulgensia Rusman; et al. (2024). Retro-digitised Enggano-German dictionary derived from Kähler’s (1987) “Enggano-Deutsches Wörterbuch”. University of Oxford. Dataset. https://doi.org/10.25446/oxford.28057742OverviewThis is a hand-digitised Enggano-German Dictionary derived from Hans Kähler's (1987) “Enggano-Deutsches Wörterbuch”. We crowdsourced the digitisation process by transcribing the dictionary's content into an online database system; the system was set up by Cokorda Pramartha and I B. G. Sarasvananda in collaboration with the first author. The database is exported into a .csv file to be further processed computationally and manually, such as fixing typos and incorrect mapping of the entry element, providing the English and Indonesian translations, and standardising the orthography.A pre-release can be accessed here. The minor update in the current version includes adding a description of the column names for the tabular data of the digitised dictionary. The dictionary is stored as a table for three file types: .rds (for the R data format), .csv, and .tsv.Aspects to be worked out for the future development of the dataset can be accessed here.
DOI: 10.15468/dl.fycz5x
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Month is January",
 "TaxonKey is Campephilus principalis principalis"
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003261-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14883797
title: Generated Samples of Dataset 2 from CaloChallenge_2022

description: Here, we have generated samples of dataset 2 from CaloChallenge 2022 using different generative models. The description of the reference dataset can be found at Fast Calorimeter Simulation Challenge 2022

We have used CaloDiffusion, CaloScore, CaloDream, and CaloINN. We utilized their official GitHub links to generate these samples.
DOI: 10.5281/zenodo.14883798
title: Generated Samples of Dataset 2 from CaloChallenge_2022

description: Here, we have generated samples of dataset 2 from CaloChallenge 2022 using different generative models. The description of the reference dataset can be found at Fast Calorimeter Simulation Challenge 2022

We have used CaloDiffusion, CaloScore, CaloDream, and CaloINN. We utilized their official GitHub links to generate these samples.
DOI: 10.15468/dl.s49ttk
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "Continent is Asia",
 "Country is Nepal",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Citrus L."
 ]
}

 The dataset includes 103 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003265-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djr6kb
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geissanthus betancurii Pipoly"
 ]
}

 The dataset includes 34 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003266-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8rekzt
title: Occurrence Download

description: A dataset containing 123164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cettia cetti (Temminck, 1820)"
 ]
}

 The dataset includes 123164 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003237-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ad9bbn
title: Occurrence Download

description: A dataset containing 182565 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Mercurialis annua L."
 ]
}

 The dataset includes 182565 records from 1414 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003227-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14884101
title: Dentition of the Mugharet El'Aliya Fossil Human Maxilla, Morocco - dental dimensions

description: Dataset underlying analyses of dental dimensions in the publication "Dentition of the Mugharet El'Aliya Fossil Human Maxilla, Morocco" (Röding et al., 2025). 

Within the provided document:



Teeth are grouped based on group description in Röding et al. (2025) and not by country, site or geological age.

The majority of the here compiled reference data to Mugharet el'Aliya is already published and references to original puclications are provided. Please either cite the individual first publications or if dataset is used as a whole cite Röding et al. (2025).

When using the previously unpublished data, i.e. el'Aliya and the Holocene H. sapiens sample, please cite Röding et al. (2025) and acknowledge S. E. Bailey, respectively.

All dental measurements are provided in mm.

If values from both R & L sides were available, they were averaged (side listed as R+L).


 

Citation:

Röding, C., El-Zaatari, S., Ramirez Rozzi, F., Stringer, C., Burgess, L., Lacruz, R., Harvati, K. (2025). Dentition of the Mugharet El’Aliya Fossil Human Maxilla, Morocco. American Journal of Biological Anthropology.
DOI: 10.5281/zenodo.14884102
title: Dentition of the Mugharet El'Aliya Fossil Human Maxilla, Morocco - dental dimensions

description: Dataset underlying analyses of dental dimensions in the publication "Dentition of the Mugharet El'Aliya Fossil Human Maxilla, Morocco" (Röding et al., 2025). 

Within the provided document:



Teeth are grouped based on group description in Röding et al. (2025) and not by country, site or geological age.

The majority of the here compiled reference data to Mugharet el'Aliya is already published and references to original puclications are provided. Please either cite the individual first publications or if dataset is used as a whole cite Röding et al. (2025).

When using the previously unpublished data, i.e. el'Aliya and the Holocene H. sapiens sample, please cite Röding et al. (2025) and acknowledge S. E. Bailey, respectively.

All dental measurements are provided in mm.

If values from both R & L sides were available, they were averaged (side listed as R+L).


 

Citation:

Röding, C., El-Zaatari, S., Ramirez Rozzi, F., Stringer, C., Burgess, L., Lacruz, R., Harvati, K. (2025). Dentition of the Mugharet El’Aliya Fossil Human Maxilla, Morocco. American Journal of Biological Anthropology.
DOI: 10.15468/dl.yxqk5e
title: Occurrence Download

description: A dataset containing 546 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geissanthus bogotensis Mez"
 ]
}

 The dataset includes 546 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003267-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.343yk3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is one of (Dactylorhiza sambucina, Dactylorhiza incarnata, Neottia ovata, Orchis militaris, Dactylorhiza fuchsii, Dactylorhiza ochroleuca, Orchis mascula, Ophrys insectifera, Neotinea ustulata, Herminium monorchis, Platanthera chlorantha, Gymnadenia densiflora, \n Gymnadenia conopsea, Anacamptis morio, \n Platanthera bifolia)",
 "Country is Sweden",
 "DecimalLatitude is greater than or equal to 56.1",
 "DecimalLatitude is less than or equal to 57.3",
 "DecimalLongitude is greater than or equal to 16.3",
 "DecimalLongitude is less than or equal to 17.3",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003268-250214102907787/datasets/export for details.
DOI: 10.5518/1345
title: All-atom visualisation of self-assembly and hydration of a β-hairpin through integrated small and wide-angle neutron scattering.

description: This work studies the CLN025 peptide in concentrated aqueous solution to understand its self assembly and hydration structure. Using SANS we are able to predict that hairpin monomers self assemble into stacks whose long axes are perpendicular to the plane of the hairpin, and that on average these stacks consist of ~7 peptides. Using this we constrain emperical potential structural refinement analysis of the WANS data to build an atomisically resolved hydration structure of the hairpin stacks.
DOI: 10.15468/dl.j27a6w
title: Occurrence Download

description: A dataset containing 3658 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Continent is Asia",
 "Country is Sri Lanka",
 "TaxonKey is Charadrius dubius Scopoli, 1786",
 "Year 2000-2025"
 ]
}

 The dataset includes 3658 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003269-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2cxqh5
title: Occurrence Download

description: A dataset containing 409707 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Netherlands",
 "TaxonKey is Alcedo atthis (Linnaeus, 1758)"
 ]
}

 The dataset includes 409707 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003257-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.exqsp8
title: Occurrence Download

description: A dataset containing 5321 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-151.71320 11.99390,-49.28680 11.99390,-49.28680 53.00610,-151.71320 53.00610,-151.71320 11.99390))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Onychomys torridus (Coues, 1874)"
 ]
}

 The dataset includes 5321 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003270-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2wgqhy
title: Occurrence Download

description: A dataset containing 9337 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Material sample, Specimen, Material citation)"
 ]
 }
 },
 "TaxonKey is Connochaetes taurinus (Burchell, 1823)"
 ]
}

 The dataset includes 9337 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003271-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14049793
title: Repository for "Light-induced cortical excitability reveals programmable shape dynamics in starfish oocytes"

description: Data and code repository for paper "Light-induced cortical excitability reveals programmable shape dynamics in starfish oocytes". DOI tbd.
DOI: 10.5281/zenodo.14049794
title: Repository for "Light-induced cortical excitability reveals programmable shape dynamics in starfish oocytes"

description: Data and code repository for paper "Light-induced cortical excitability reveals programmable shape dynamics in starfish oocytes". DOI tbd.
DOI: 10.17866/rd.salford.7929749
title: AimHi Product Launch Blog

description: Blog post from Add Energy Group launching AimHi product<br>
DOI: 10.17866/rd.salford.7929749.v1
title: AimHi Product Launch Blog

description: Blog post from Add Energy Group launching AimHi product<br>
DOI: 10.15468/dl.kumuui
title: Occurrence Download

description: A dataset containing 6990 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Ethnobotanical surveys species in Benin (West Africa)"
 ]
}

 The dataset includes 6990 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023353-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shvnwg
title: Occurrence Download

description: A dataset containing 6862 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Pulicaria vulgaris Gaertn."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6862 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017221-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fmjyey
title: Occurrence Download

description: A dataset containing 3709595 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Buteo buteo (Linnaeus, 1758)",
 "HasCoordinate is True",
 "Year is greater than or equal to 1900",
 "Year is less than or equal to 2021",
 "Month is greater than or equal to January",
 "Month is less than or equal to December",
 "HasGeospatialIssue is False"
 ]
}

 The dataset includes 3709595 records from 1224 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011412-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kb2nsf
title: Occurrence Download

description: A dataset containing 85461 species occurrences available in GBIF matching the query:
{
 "PublishingCountry" : [
 "is Cameroon"
 ]
}

 The dataset includes 85461 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015062-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lnpm3f
title: Occurrence Download

description: A dataset containing 339 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "DatasetKey is Planktic foraminifera abundance of Hole 67-499"
 ]
}

 The dataset includes 339 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017221-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.