cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11043487
title: MS/MS databases for MassCube

description: An updated MS/MS spectral database for MassCube version 1.2.13 or later. This database was cleaned based on adduct forms (i.e. precursor types) to improve the annotation accuracy. Unweighted entropy similarity is used for spectral matching (ms_entropy Python package ver. 1.3.4). Please make sure you use the latest version of the MS/MS library. Check our documentation for more details: https://huaxuyu.github.io/masscubedocs/.

 

Note: this pickle file is an "FlashEntropySearch" object generated from the ms_entropy Python package. 

Python script:



from ms_entropy import FlashEntropySearch

entropy_search = FlashEntropySearch(intensity_weight=None)
DOI: 10.5281/zenodo.17902514
title: MS/MS databases for MassCube

description: An updated MS/MS spectral database for MassCube version 1.2.13 or later. This database was cleaned based on adduct forms (i.e. precursor types) to improve the annotation accuracy. Unweighted entropy similarity is used for spectral matching (ms_entropy Python package ver. 1.3.4). Please make sure you use the latest version of the MS/MS library. Check our documentation for more details: https://huaxuyu.github.io/masscubedocs/.

 

Note: this pickle file is an "FlashEntropySearch" object generated from the ms_entropy Python package. 

Python script:



from ms_entropy import FlashEntropySearch

entropy_search = FlashEntropySearch(intensity_weight=None)
DOI: 10.25574/29374
title: Chandra X-ray Observatory ObsId 29374

description: Characterizing the Energetics and Dynamics of V750 Ara, a gamma Cas-type Star
DOI: 10.25574/29382
title: Chandra X-ray Observatory ObsId 29382

description: High energy gratings spectroscopy of novae
DOI: 10.25574/29448
title: Chandra X-ray Observatory ObsId 29448

description: Characterizing the Energetics and Dynamics of V750 Ara, a gamma Cas-type Star
DOI: 10.25574/29487
title: Chandra X-ray Observatory ObsId 29487

description: Joint HETGS/XRISM observation of NGC 3783
DOI: 10.25574/29488
title: Chandra X-ray Observatory ObsId 29488

description: Joint HETGS/XRISM observation of NGC 3783
DOI: 10.15468/dl.ty2qy4
title: Occurrence Download

description: A dataset containing 6952 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chelonoidis denticulatus, Podocnemis expansa)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6952 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047828-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/29495
title: Chandra X-ray Observatory ObsId 29495

description: Joint HETGS/XRISM observation of NGC 3783
DOI: 10.15468/dl.2zru26
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry MULTIPOLYGON(((-5.47703 36.1175,-5.48134 36.11572,-5.4823 36.11497,-5.48554 36.11524,-5.48648 36.11462,-5.48904 36.11543,-5.49008 36.11531,-5.49078 36.11471,-5.4909 36.11386,-5.49276 36.1127,-5.49348 36.11292,-5.49555 36.11274,-5.49515 36.11237,-5.49243 36.11217,-5.48895 36.11472,-5.48694 36.11404,-5.48312 36.1142,-5.48173 36.11451,-5.47748 36.11655,-5.47677 36.1171,-5.47703 36.1175)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047829-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyuj95
title: Occurrence Download

description: A dataset containing 1427 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Stachys agraria"
 ]
}

 The dataset includes 1427 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047830-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14113444
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.ect25j
title: Occurrence Download

description: A dataset containing 3247 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Stachys coccinea"
 ]
}

 The dataset includes 3247 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047831-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17902557
title: Impacts de l'activité de quelques acteurs de la chaîne de valeurs du bois sur le bien-être des ménages à Faranah, Guinée

description: L’étude menée dans la région de Faranah entre décembre 2024 et avril 2025 met en évidence les effets économiques, sociaux, et environnementaux de la filière bois sur le bien-être des ménages et la dynamique locale. Les enquêtes réalisées dans les quatre préfectures montrent que cette activité constitue une source essentielle de revenus pour les ménages et les collectivités. Toutefois les marges varient fortement selon les zones : la commune de Faranah se distingue par une forte valorisation économique, tandis que Dabola enregistre la rentabilité la plus faible. Le bénéfice moyen par arbre atteint environ 50 000 GNF, traduisant une distribution inégale. Sur le plan social, la filière regroupe une diversité d’acteurs (exploitants, transformateurs, commerçants, consommateurs) et génère de nombreux emplois directs et indirects. Environ 68 % des acteurs se déclarent satisfaits, soulignant son rôle dans l’amélioration du bien-être local. En revanche, l’exploitation artisanale et peu régulée exerce une pression croissante sur les ressources forestières, révélant une fragilité écologique nécessitant une gestion durable.
DOI: 10.5281/zenodo.17902558
title: Impacts de l'activité de quelques acteurs de la chaîne de valeurs du bois sur le bien-être des ménages à Faranah, Guinée

description: L’étude menée dans la région de Faranah entre décembre 2024 et avril 2025 met en évidence les effets économiques, sociaux, et environnementaux de la filière bois sur le bien-être des ménages et la dynamique locale. Les enquêtes réalisées dans les quatre préfectures montrent que cette activité constitue une source essentielle de revenus pour les ménages et les collectivités. Toutefois les marges varient fortement selon les zones : la commune de Faranah se distingue par une forte valorisation économique, tandis que Dabola enregistre la rentabilité la plus faible. Le bénéfice moyen par arbre atteint environ 50 000 GNF, traduisant une distribution inégale. Sur le plan social, la filière regroupe une diversité d’acteurs (exploitants, transformateurs, commerçants, consommateurs) et génère de nombreux emplois directs et indirects. Environ 68 % des acteurs se déclarent satisfaits, soulignant son rôle dans l’amélioration du bien-être local. En revanche, l’exploitation artisanale et peu régulée exerce une pression croissante sur les ressources forestières, révélant une fragilité écologique nécessitant une gestion durable.
DOI: 10.15468/dl.ac2g7n
title: Occurrence Download

description: A dataset containing 716955 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-114.93761 32.39873,-110.28218 31.11285,-102.96485 31.92792,-102.90636 36.91532,-102.02755 37.0512,-102.01834 41.04587,-110.86896 41.08798,-111.14243 42.11211,-113.99883 41.95074,-114.05892 37.29736,-114.78955 36.18025,-114.93761 32.39873))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arthropoda"
 ]
}

 The dataset includes 716955 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047820-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/1aqtsu
title: PAN-00161187 - terra sigillata cup Drag. 33 C-EG

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00161187&lt;/p&gt;
description: Modified: 2025-11-10T11:41:52+01:00
DOI: 10.5281/zenodo.15595030
title: Update and ADMET profile of the Latin American Natural Product Database: LANaPDB
DOI: 10.5281/zenodo.17902485
title: Update and ADMET profile of the Latin American Natural Product Database: LANaPDB
DOI: 10.6084/m9.figshare.30862697
title: Raw Data for A Customizable, Low-cost 3D-Printed Device for Live Cell Confinement Imaging

description: This is the raw data used for the paper: A Customizable, Low-cost 3D-Printed Device for Live Cell Confinement Imaging.
DOI: 10.6084/m9.figshare.30862697.v1
title: Raw Data for A Customizable, Low-cost 3D-Printed Device for Live Cell Confinement Imaging

description: This is the raw data used for the paper: A Customizable, Low-cost 3D-Printed Device for Live Cell Confinement Imaging.
DOI: 10.15468/dl.q3j6kw
title: Occurrence Download

description: A dataset containing 968 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is one of (Ireland, United Kingdom of Great Britain and Northern Ireland)",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Salmo trutta"
 ]
}

 The dataset includes 968 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047832-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30823997.v1
title: Data availability_GPR39_MK

description: G protein-coupled receptor 39 (GPR39) is an orphan receptor that is highly expressed in renal collecting duct principal cells. GPR39 activation <i>in vivo</i> leads to reduced urinary concentration capacity. In this study, we utilized mpkCCD cells, a model of principal cells in the collecting duct, to examine the cell biological effects of GPR39 activation. Pharmacological activation of GPR39 with the synthetic agonist cpd1324 impaired vasopressin-mediated aquaporin-2 (AQP2) apical trafficking and reduced total AQP2 expression following long-term treatment, consistent with its known <i>in vivo</i> role. These effects were absent in GPR39 knockout cells. In addition, GPR39 activation altered apical membrane morphology, disrupted the tight junction network, and reduced cortical F-actin expression, suggesting a shift toward a dedifferentiated phenotype. GPR39 activation also increased glycolytic ATP production while reducing mitochondrial ATP output without affecting proliferation. RNA-seq analysis of acutely treated mpkCCD cells revealed upregulation of inflammatory and dedifferentiation-associated gene programs, including cytokines. These findings indicate that the role of GPR39 in principal cells goes beyond AQP2 regulation and imply that GPR39 functions as a negative regulator of epithelial differentiation, perhaps acting to coordinate metabolic and inflammatory responses to stress.
DOI: 10.15468/5emw87
title: HELCOM/OSPAR Finland ports water sampling

description: This dataset includes the data used in in the HELCOM/OSPAR Ballast Water Exemptions Decision Support Tool. This tool was developed in 2013 based on the overall IMO framework, the 21 Baltic and North-East Atlantic coastal states and the EU. It allows user to define 'low risk' routes, as well as other necessary steps in granting exemptions under regulation A-4 of the IMO Ballast Water Management Convention (BWMC)
DOI: 10.15468/xx2gkq
title: ICES Vulnerable Marine Ecosystems

description: -----
DOI: 10.15468/dl.2h8gra
title: Occurrence Download

description: A dataset containing 5586394 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Glomeraceae, Gigasporaceae, Acaulosporaceae, Diversisporaceae, Suillus, Rhizopogon, Laccaria, Tulasnella, Suillaceae, Thelephoraceae, Cortinariaceae, Amanitaceae, Boletaceae, Russulaceae, Tulasnellaceae, Ceratobasidiaceae, Sebacinales, Hyaloscyphaceae, Myxotrichaceae)"
 ]
}

 The dataset includes 5586394 records from 1296 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047804-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive24817.20240916.9.1
title: Draconibacterium orientale Du et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24818.20240916.9.1
title: Hydrogenispora ethanolica Liu et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24819.20240916.9.1
title: Nitrososphaera viennensis Stieglmeier et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24820.20240916.9.1
title: Acidihalobacter ferrooxydans Khaleque et al. 2019

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24823.20240510.9
title: Agrobacterium radiobacter (Beijerinck and van Delden 1902) Conn 1942 emend. Zhang et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24824.20240510.9
title: Anaeroflexus maritimus Stetter et al.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.xtr4dk
title: Occurrence Download

description: A dataset containing 30174 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dicentrarchus labrax (Linnaeus, 1758)"
 ]
}

 The dataset includes 30174 records from 251 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060006-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fhg9ex
title: Occurrence Download

description: A dataset containing 256381 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ulex europaeus L."
 ]
}

 The dataset includes 256381 records from 1750 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015059-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jsu5xj
title: Occurrence Download

description: A dataset containing 27082 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selene vomer (Linnaeus, 1758)"
 ]
}

 The dataset includes 27082 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0234206-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e2d1sf
title: Occurrence Download

description: A dataset containing 825 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Census of animal of Benin: Database 1"
 ]
}

 The dataset includes 825 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021901-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pgepk3
title: Occurrence Download

description: A dataset containing 14865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is USA",
 "OccurrenceStatus is Present",
 "TaxonKey is Ixodida"
 ]
}

 The dataset includes 14865 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106315-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gafknt
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Gymnocoronis spilanthoides DC."
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0287938-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xdmkfi
title: Occurrence Download

description: A dataset containing 6247 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Census of medical plant species of Benin (West Africa) by SOS Biodiversity"
 ]
}

 The dataset includes 6247 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021913-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.102569
title: KOM OMBO_nb_1975_02519

description: Référence : nb_1975_02519<br />Site : Kôm Ombo<br />Type : photographie<br />
DOI: 10.15468/dl.sch8hr
title: Occurrence Download

description: A dataset containing 103409 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cerastium semidecandrum L."
 ]
}

 The dataset includes 103409 records from 742 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033261-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.102568
title: KOM OMBO_nb_1975_02518

description: Référence : nb_1975_02518<br />Site : Kôm Ombo<br />Type : photographie<br />
DOI: 10.15468/dl.cn5x7b
title: Occurrence Download

description: A dataset containing 264 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scaphiophryne brevis (Boulenger, 1896)"
 ]
}

 The dataset includes 264 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0301492-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n2fb4u
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glaucostegus petiti (Chabanaud, 1929)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029541-220831081235567/datasets/export for details.
DOI: 10.34816/ifao.archives.102567
title: KOM OMBO_nb_1975_02517

description: Référence : nb_1975_02517<br />Site : Kôm Ombo<br />Type : photographie<br />
DOI: 10.34816/ifao.archives.102566
title: KOM OMBO_nb_1975_02516

description: Référence : nb_1975_02516<br />Site : Kôm Ombo<br />Type : photographie<br />
DOI: 10.15468/dl.x6b3rz
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "TaxonKey is Ixodes festai Rondelli, 1926"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106323-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.102565
title: KOM OMBO_nb_1975_02515

description: Référence : nb_1975_02515<br />Site : Kôm Ombo<br />Type : photographie<br />
DOI: 10.15468/dl.6dpw3e
title: Occurrence Download

description: A dataset containing 9902 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Data collected in the framework of the accomplishment of research activities"
 ]
}

 The dataset includes 9902 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021939-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.102564
title: KOM OMBO_nb_1975_02514

description: Référence : nb_1975_02514<br />Site : Kôm Ombo<br />Type : photographie<br />
DOI: 10.15468/dl.q263wf
title: Occurrence Download

description: A dataset containing 189 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centrolene savagei (Ruiz-Carranza & Lynch, 1991)"
 ]
}

 The dataset includes 189 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0301490-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.102563
title: KOM OMBO_nb_1975_02513

description: Référence : nb_1975_02513<br />Site : Kôm Ombo<br />Type : photographie<br />
DOI: 10.15468/dl.5enung
title: Occurrence Download

description: A dataset containing 1815 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salamandra lanzai Nascetti, Andreone, Capula & Bullini, 1988"
 ]
}

 The dataset includes 1815 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106334-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.swxysr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apiomorpha helmsii Fuller, 1897",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is United States",
 "Country is United States of America",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0368118-210914110416597/datasets/export for details.
DOI: 10.34816/ifao.archives.102562
title: KOM OMBO_nb_1975_02512

description: Référence : nb_1975_02512<br />Site : Kôm Ombo<br />Type : photographie<br />
DOI: 10.15468/dl.7ymqis
title: Occurrence Download

description: A dataset containing 1581 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Collection of Occurrence data on mammal species during wildlife census in W Biosphere Reserve in 2013 and 2015."
 ]
}

 The dataset includes 1581 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021937-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.102561
title: KOM OMBO_nb_1975_02511

description: Référence : nb_1975_02511<br />Site : Kôm Ombo<br />Type : photographie<br />