cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.940201
title: Micro CT scans for zebrafish on an obesogenic diet (DIO), on caloric restriction (CR) or undergoing catch up growth after 1, 3 or 9 months of CR (CG1, CG3, CG9)

description: For µCT imaging, adult zebrafish were fixed and decalcified in Bouin's solution at room temperature for 7 days, stored in PBS and imaged using a micro-computed tomography (µCT) device (SkyScan1272, Bruker BioSpin GmbH, Ettlingen, Germany). Zebrafish were placed individually in 1.5ml Eppendorf tubes using and an ultra-focus scan over the whole body was performed in a full-rotation in step-and-shoot mode. 322 projections (1008x672 pixels, 4x4 binning) were acquired per subscan with an x-ray tube voltage of 60 kV, power 0.166 mA, aluminum filter 0.25 mm,exposure time of 363 ms, 6 averages and a object-source distance of 86 mm. All CT images were reconstructed at an isotropic voxel size of 18 µm using a Feldkamp type algorithm (filtered back-projection). Fat-containing regions were appear hypo intense in µCT data and were segmented using Imalytics Preclinical (Gremse-IT GmbH, Aachen, Germany (Gremse et al., 2016; doi:10.7150/thno.13624). The volumetric fat percentage was calculated as the ratio of subcutaneous adipose tissue (SAT) or visceral adipose tissue (VAT) fat volume compared to the entire volume of the body cavity anterior of the anal fin and expressed per skeletal segment.
description: Fish were raised as previously reported (Leibold and Hammerschmidt, 2015) for the following conditions:CG1: compensatory or catch up growth shifted at 1 month of ageCG3: compensatory or catch up growth shifted at 3 months of ageCG9: compensatory or catch up growth shifted at 9 months of ageCR: caloric restrictionDIO: diet induced obesityThe CT .nii files correlate to the groups as follows: Group 2: CG1; Group 3: DIO1; Group 6: CG3; Group 7 DIO3; Group 10: CG9; Group 11: DIO9; Group 1: CR1; Group 5: CR3; Group 9: CR9
DOI: 10.1594/pangaea.941774
title: Vertical isotope gradients and Hiatus ranges in Campanian to Maastrichtian sediments (Tables 7 and 8)
DOI: 10.15468/dl.vjmaoh
title: Occurrence Download

description: A dataset containing 21100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "Year 1975-2020",
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Aquila chrysaetos (Linnaeus, 1758)"
 ]
}

 The dataset includes 21100 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018531-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.77hwdn
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynisca liberiensis (Boulenger, 1878)"
 ]
}

 The dataset includes 9 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284219-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.941313
title: Long-term obesogenic diet leads to metabolic phenotypes which are not exacerbated by catch-up growth in zebrafish

description: Obesity is a world wide problem and evidence suggests, that early lifetime undernourishment of caloric restirction predispose an organism for obesity and metabolic syndrome. We have raised two cohorts of zebrafish in an obesogenic environment (DIO) and compared several metabolic markers with fish raised under caloric restriction (CR) or fish shifted from CR to DIO at different periods in their life. We have looked morphologically at standard length and weight and found that fish on DIO grow faster in both axes. Fish shifted from CR to DIO show catch-up growth and not compensatory growth when shifted at one month, 3 months or 9 months of age. We have further characterized central agrp expression and hyperphagia, adipose tissue by histology as well as uCT imaging, hepatic histology, metabolic rate mitochondrial function as well as feeding induced glucose levels. We find that fish in an obesogenic environment develop markers of obesity which are not exacerbated by ealry lifetime food restriction.
DOI: 10.15468/dl.rq5k3z
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calanthe inflata Schltr."
 ]
}

 The dataset includes 15 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113872-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.939922
title: Composition of biogenic VOCs emitted from select plant species near Cataract Scout Park, Australia, taken during the COALA-2020 campaign

description: Measurements of volatile organic compounds composition were captured using thermal desorption tubes from a Teflon enclosure. Measurements were taken at Cataract Scout Park, Appin, N.S.W. (34°14'42.29S 150°49'24.97E) as part of the Characterizing Organics and Aerosol Loading over Australia (COALA-2020) campaign. Enclosures captured branches of select local tree/shrub species.Branch level VOC samples were made using a custom built, 9L branch enclosure. The two ends of the chamber were made from polytetrafluoroethylene (PTFE) supporting a transparent enclosure made from polyvinyl fluoride film (Dupont Chemicals, Macquarie Park, NSW, Australia). Ambient air, passed through an activated charcoal scrubber, was supplied to the chamber at 12 L min-1 using a mass flow controller (Aalborg, Orangeburg, NY, USA). Temperatures inside and outside the chamber were recorded manually every 5 minutes using a Digitech thermocouple thermometer with type K thermocouples (Jaycar Electronics, Rydalmere, NSW, Australia). Photosynthetically active radiation (PAR; µmol m-2 s-1) was recorded at the top of the chamber manually every 5 minutes using an Asensetek Lighting Passport; Asensetek, Taipei, Taiwan). VOCs were collected from the enclosures using a sorbent tube containing Tenax TA (Markes International Ltd, Llantrisant, U.K) connected to an air pump (AirChek 2000; SKC Inc., Eighty-Four, PA, USA) flowing air at 200mL min-1 for 30 minutes.Branches were allowed 30 minutes to acclimate to conditions within the enclosure before VOC sampling commenced. Background (control) enclosure samples were taken at the beginning and end of each day. Post-sampling, tubes were maintained at 4°C until analysis by GC-MS. Sampling occurred over a two-week period in January 2020 and again in March 2020. Sorbent tubes were analysed by thermal desorption GC-MS using the same equipment and protocols described in Lawson et al. (2020; doi:10.3389/fmars.2020.00106). GC-MS data was then post-processed as described in Lawson et al. (2020) except contaminants were subtracted using mean plus 95% confidence values. Peaks were identified by manually comparing mass spectra against a commercial library (NIST08 library in NIST MS Search v.2.2f; NIST, Gaithersburg, MD, United States) using a match factor of 700. When peaks could not be identified, these were labelled using the format UNK with the number that follows being the retention time of the compound. Values for the peaks are expressed as percentages of the total quantifiable peak area (%TQPA).
DOI: 10.15468/dl.dfkrts
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphorbia orobanchoides (P.R.O.Bally) Bruyns"
 ]
}

 The dataset includes 19 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0206076-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avpcrf
title: Occurrence Download

description: A dataset containing 27449 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melilotus indicus (L.) All."
 ]
}

 The dataset includes 27449 records from 585 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113880-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.941374
title: CT DICOM for Core CE18011_VC2

description: Computed Tomography DICOM images of core CE18011_VC2 acquired from the western Porcupine Bank (Latitude 51.9765, Longitude -15.037) on board the RV Celtic Explorer using the Holland 1 Remotely Operated Vehicle during the Cold-Water Coral Habitats in Submarine Canyons (CoCoHaCa) cruise campaign (cruise code - CE18011_VC2). Images acquired using a GE Revolution HD 64 slice computer tomography scanner at the Cork University Hospital, Cork, Ireland (11.09.2018). Data were acquired with an X-ray source voltage of 120 kV and a current of 600 mA. The acquired scans have a resolution of 0.35 x 0.35 x 0.625 mm3 (x, y, z direction). The core spans from the Late Pleistocene to the Early Holocene (35.8 to 9.8 ka BYP). The core has a unique Ice Rafted Debris Core, which further adds to the understanding of the deglaciation history of the British-Irish Ice Sheet.
DOI: 10.15468/dl.9k65yh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vernonia defiersii Gand., 1918"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028877-230810091245214/datasets/export for details.
DOI: 10.1594/pangaea.941400
title: Melt rates of 44 repeated phase-sensitive radar point measurements between December 2015/January 2016 and December 2016 at the Filchner Ice Shelf, Antarctica

description: The dataset consists of raw data and Lagrangian basal melt rates of 44 repeated phase-sensitive radar (pRES) point measurements, first recorded in December 2015/January 2016 and repeated in December 2016 at the Filchner Ice Shelf, Antarctica. These measurements were allocated in 13 cross-sections with up to five measurements at different locations along the sections across the channel: outside west (OW) of the channel (OW), at the steepest western (SW) flank, at the lowest (L) surface elevation, at the steepest eastern (SE) flank and outside east (OE) of the channel.These Lagrangian measurements allow the estimation of basal melt rates based on estimated vertical displacements of englacial and basal reflections. At 7 sites, more than one strong basal reflection occurred. Therefore, we averaged the melt rates we derived from the first and from the strongest basal return. Beside raw-data, the dataset includes coordinates of the first and repeated measurements, as well es ice thicknesses and derived change in ice thickness, dynamic ice thickness change, basal melt and basal melt rate.
description: Further details:The pRES is frequency-modulated continuous wave (FMCW) radar that transmits a tone sweep – called chirp – ranging from 200 to 400 MHz over a period of one second. In order to improve the signal-to-noise ratio, 100 chirps are transmitted within a single measurement. Background information of the pRES-system is published by Brennan et al. (2014) and Nicholls et al. (2015). The processing of the data is described in Stewart (2017) and Stewart et al. (2019).(Brennan et al. (2014): 10.1049/iet-rsn.2013.0053; Nicholls et al. (2015): doi:10.3189/2015JoG15J073; Stewart (2018): doi:10.17863/CAM.21483; Stewart et al. (2019): doi:10.1038/s41561-019-0356-0)Data were measured in the field by Angelika Humbert and Daniel Steinhage. Data processing was done by Ole Zeising, data analysis by Ole Zeising and Angelika Humbert.This dataset has been planned by Angelika Humbert as part of the Filchner Ice Shelf Project (FISP).If you have questions, please contact Ole Zeising (ole.zeising@awi.de), Angelika Humbert (Angelika.humbert@awi.de) or co-authors.
DOI: 10.15468/dl.ypzfqs
title: Occurrence Download

description: A dataset containing 334 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Gestion du site des prés-salés Est de la Teste-de-Buch du conservatoire du littoral et de sites naturels aux alentours-Données opportunistes faune"
 ]
}

 The dataset includes 334 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024906-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.941820
title: 40Ar/39Ar ages from hornblende, biotite and muscovite, raw data
DOI: 10.1594/pangaea.941836
title: Seabed images taken at pilot oyster reefs in the Borkum Reef Ground marine protected area during September 2021

description: Imagery transects with a camera attached to a frame design for taking pictures in a 50 x 50 cm area. Seabed images transects were carried out by scientific divers during the RESTORE expedition on board the ship Arctic Ocean during September 2021, focusing on the monitoring of two pilot reefs (east and west) and the ecology of benthic assemblages in the Borkum Reef Ground marine protected area. The camera used was a Cannon EOS M6 camera, the pictures were taken perpendicularly to the seabed. The transects were done along a preset track across the reefs, number of pictures per transect varied based on diving time, with a minimum of 10 images per transect. Due to logistic problems, two transects were done for the east reef, and one for the west reef. The seabed images provide insights into the general composition of key species, higher systematic groups and ecological guilds. The images also contain valuable information on how benthic species are associated to each other. Dataset includes individual images, and metadata of each image including diving depth, date/time, and corresponding diver. Detailed geographical coordinates of individual images are unavailable.
DOI: 10.15468/dl.ys2kze
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calanthe keshabii Lucksom"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113894-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.941402
title: Raw data of melt rates of 44 repeated phase-sensitive radar point measurements between December 2015/January 2016 and December 2016 at the Filchner Ice Shelf, Antarctica

description: The dataset consists of raw data and Lagrangian basal melt rates of 44 repeated phase-sensitive radar (pRES) point measurements, first recorded in December 2015/January 2016 and repeated in December 2016 at the Filchner Ice Shelf, Antarctica. These measurements were allocated in 13 cross-sections with up to five measurements at different locations along the sections across the channel: outside west (OW) of the channel (OW), at the steepest western (SW) flank, at the lowest (L) surface elevation, at the steepest eastern (SE) flank and outside east (OE) of the channel.These Lagrangian measurements allow the estimation of basal melt rates based on estimated vertical displacements of englacial and basal reflections. At 7 sites, more than one strong basal reflection occurred. Therefore, we averaged the melt rates we derived from the first and from the strongest basal return. Beside raw-data, the dataset includes coordinates of the first and repeated measurements, as well es ice thicknesses and derived change in ice thickness, dynamic ice thickness change, basal melt and basal melt rate.
description: Further details:The pRES is frequency-modulated continuous wave (FMCW) radar that transmits a tone sweep – called chirp – ranging from 200 to 400 MHz over a period of one second. In order to improve the signal-to-noise ratio, 100 chirps are transmitted within a single measurement. Background information of the pRES-system is published by Brennan et al. (2014) and Nicholls et al. (2015). The processing of the data is described in Stewart (2017) and Stewart et al. (2019).(Brennan et al. (2014): 10.1049/iet-rsn.2013.0053; Nicholls et al. (2015): doi:10.3189/2015JoG15J073; Stewart (2018): doi:10.17863/CAM.21483; Stewart et al. (2019): doi:10.1038/s41561-019-0356-0)Data were measured in the field by Angelika Humbert and Daniel Steinhage. Data processing was done by Ole Zeising, data analysis by Ole Zeising and Angelika Humbert.This dataset has been planned by Angelika Humbert as part of the Filchner Ice Shelf Project (FISP).If you have questions, please contact Ole Zeising (ole.zeising@awi.de), Angelika Humbert (Angelika.humbert@awi.de) or co-authors.
DOI: 10.1594/pangaea.941403
title: Multibeam bathymetry processed data (Reson SeaBat T50-S working area dataset) of AUV ABYSS during cruise AL532, East Sicily continental margin

description: The data comprise two bathymetric grids acquired with a 200 kHz multibeam echosounder carried by the Autonomous Underwater Vehicle (AUV) ABYSS. The data was collected during research cruise AL532 with RV ALKOR in January 2020. Both grids are fully processed and each cover an area about 2.5 x 2.5 km of the seafloor with a grid spacing of 2m.
DOI: 10.15468/dl.5mgexc
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ptyodactylus homolepis Blanford, 1876"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284202-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4smuf
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudoeurycea obesa Parra-Olea, García-París, Hanken & Wake, 2005"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024922-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.941873
title: Continuous raw particle number concentration data in 10 sec resolution, measured in the Swiss aerosol container during MOSAiC 2019/2020

description: This dataset contains raw particle number concentration data measured during the year long MOSAiC expedition from October 2019 to September 2020. The measurement was performed in the Swiss aerosol container on the D-deck of Research Vessel Polarstern using an inlet with an upper cut-off of 1 µm (called also interstitial inlet). Data were collected by a Condensation Particle Counter (CPC) model 3025 (TSI Inc.) in 10 s resolution with a lower cut-off diameter of 3 nm. More detailed information about its position and the measurement setup can be found in (Beck et al., 2022).Participation of the Swiss Container was co-financed by the Swiss Polar Institute and University of Helsinki.
description: The particle concentration data were not processed, however periods where the instrument did not measure outdoor air were removed. We used 10 sec time resolution positional data from the following datasets: Rex, M (2020), Haas, C (2020), Kanzow, T (2020), Rex, M (2021a,b).
DOI: 10.15468/dl.dy5y92
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calanthe leuseri P.J.Cribb"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113908-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.942014
title: Absolute pressure at the sea floor at the West coast of Sylt from Sept 27 to Oct 6, 2016

description: Two bottom mounted pressure wave gauges were deployed at the West coast of Sylt as part of the WaveDiss2016 field experiment to study wave transformation in the surf zone. The sensors measured the absolute pressure at the sea floor in 10 Hz, which can be used to estimate the surface elevation timeseries and derive surface wave quantities, e.g. wave height, period or wave shape. The sensors were mounted on a concrete plate and were deployed manually at low tide. On recovery, the sensors were immersed into the sand by about 30 cm. One sensor provided data from Sep 27, 2016 until Sep 30, the second one until Oct 6.
DOI: 10.15468/dl.3iydp2
title: Occurrence Download

description: A dataset containing 1802 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Données rhopalocères 2007/2014 Marais du Logit"
 ]
}

 The dataset includes 1802 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024926-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.942035
title: Evidence of extraordinary marine species in the SW Baltic Sea

description: The presence of an extended salinity gradient of the Baltic Sea reveals a variety of species occur at the limit of their physiological tolerance and preference, i.e. in areas and habitats not representing their marine or fresh water origin. Hence, the Baltic Sea is known for its high share of non-indigenous species, which have established. In this study, we compiled extraordinary sightings of transient, non-native or potentially range expanding species, such as jellyfish, squid, fishes and marine mammals in the SW Baltic Sea for a period from 2001 to 2018. We focused on jellyfish, squid, fishes and marine mammals. Hydrographic conditions, such as water temperature and salinity, obtained from a high spatio-temporally resolved hydrodynamic Baltic Sea model, covering a daily resolved 40-year time series were linked to the sightings of these extraordinary species. Our hydrodynamic modelling results demonstarted that changes in the occurrence of exceptional species reflect the dynamics of water mass exchange between the Kattegat/Skagerrak and the SW Baltic Sea. Our analyses show that these changes could be related to the presence of anomalously high saline water masses. This documents that the hydrographically highly dynamic SW Baltic Sea needs special attention for monitoring of non-indigenous species, as high saline and warm water intrusions are more frequent than currently believed and ii) can be linked to sightings of exceptional species in the SW Baltic Sea.