cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48610/d3d33b0
title: Data for: Drone surveys of birds foraging in intertidal habitats: A proof-of-concept in Moreton Bay, Australia

description: We used a DJI Mavic 3 Enterprize to survey a 650m x 250m section of intertidal mudflat surrounding Minjerribah (-27.51, 153.41), an island in Moreton Bay off the east coast of Australia.

We flew the drone at 80m height, capturing images at a ground sampling distance of 0.00429mmpix-1, covering 16m x 12m of ground per image. Images were captured in 7 straight lines spaced 75m apart, oriented perpendicular to the shoreline, flight speed was 4ms-1. The drone pilot had their remote pilots licence and flights were approved by the Department of Environment and Science, Ausralin Government, the Queensland Animal Ethics Committee (2021/AE000474), and the Quandamooka Yulluburrabee Aboriginal Corporation.

During surveys, I also observed the birds with a spotting scope from the drone launch point 250m away from the site and recorded the number and species of birds within the study site as well as any signs of disturbance. I have four years of experience surveying birds across intertidal mudflats.

To make viewing the transects easier, I mosaiced the images from the transects together to create 7 long mosaics, one for each transect. To orthorectify and mosaic the images I used Web Open Drone Map. Within the WebODM application, I uploaded the images from a transect, then created the orthomosaic using the settings: crop: 0, fast-orthophoto: true, ignore-gsd: true, orthophoto-resolution: 0.429, sfm-algorithm: planar. Because orthorectifying the images can introduce distortions that can reduce the quality of the images, I also mosaicked the images without orthorectifying them. To do this, I used Python to manually paste the images into one large image, using the drone positional data stored in the image Exif to position each image correctly.

The birds within the images were detected and identified both manually, and using the computer vision tool developed by Wilson et al. (2025).

The results of this survey are given in the supporting material provided here.

Code
CS1_Transect_Spacing.R: Code used to determine error associated with transect drone wildlife surveys based on transect spacing and wildlife abundance, density and clustering.
CS2_Mosaic_Images.py: Code to stitch raw drone survey images into a single image for each transect.
CS3_Modify_Mission.py: Code to modify the survey kmz file generated by DJI Pilot 2 Application to change the survey height and camera zoom.

Data
TS1_Species: List of the native bird species found in the Moreton Bay local government area.
TS2_Computer_Orthomosaic: Computer vision tool counts of the birds in the orthomosaic images.
TS3_Computer_Mosaic: Computer vision tool counts of the birds in the mosaic images.
TS4_Manual: Manual counts of the birds in the orthomosaic images.
TS5_Ground: Ground counts of the birds conducted at the same time as the drone survey.
TS6_Computer_Assessment: Assessment of the computer vision tool performance compared to the manual counts of drone images.
TS7_Results: Summary of the results of the survey.
DOI: 10.15468/dl.vpr4ex
title: Occurrence Download

description: A dataset containing 3288 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Conringia orientalis (L.) Dumort.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 3288 records from 278 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009263-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xgfe2a
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Oman",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Boswellia sacra Flück."
 ]
}

 The dataset includes 44 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069502-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29412314
title: KONTRASEPSI DALAM PERSPEKTIF ISLAM.pdf

description: Penelitian ini mengkaji urgensi penggunaan kontrasepsi dalam perspektif Islam, krusial bagi kesejahteraan keluarga dan pengelolaan dinamika populasi di Indonesia yang mayoritas Muslim. Tujuannya mengeksplorasi keseimbangan antara kesehatan reproduksi, termasuk kesehatan ibu dan anak, serta prinsip-prinsip agama yang dinamis. Menggunakan metode studi pustaka komprehensif dan wawancara mendalam dengan tokoh agama serta masyarakat pengguna berbagai metode kontrasepsi, penelitian ini menemukan bahwa penggunaan kontrasepsi umumnya diperbolehkan dalam Islam. Ini terutama untuk tujuan menjaga kesehatan, menjarangkan kehamilan, dan memastikan kapasitas keluarga dalam memberikan pengasuhan yang optimal, asalkan tidak bersifat permanen. Namun, implementasinya masih menghadapi tantangan signifikan seperti stigma sosial, kurangnya pengetahuan akurat tentang hukum Islam dan manfaatnya, serta dukungan suami yang belum merata, yang mencerminkan adanya kesenjangan gender. Oleh karena itu, kesimpulan penelitian ini menekankan pentingnya edukasi yang lebih baik mengenai manfaat kontrasepsi dari perspektif medis dan syariat. Perlunya dukungan aktif dari tokoh agama juga esensial untuk meningkatkan penerimaan masyarakat terhadap praktik keluarga berencana yang selaras dengan nilai-nilai Islam, demi tercapainya keluarga yang lebih sejahtera dan masyarakat yang berdaya.
DOI: 10.6084/m9.figshare.29412314.v1
title: KONTRASEPSI DALAM PERSPEKTIF ISLAM.pdf

description: Penelitian ini mengkaji urgensi penggunaan kontrasepsi dalam perspektif Islam, krusial bagi kesejahteraan keluarga dan pengelolaan dinamika populasi di Indonesia yang mayoritas Muslim. Tujuannya mengeksplorasi keseimbangan antara kesehatan reproduksi, termasuk kesehatan ibu dan anak, serta prinsip-prinsip agama yang dinamis. Menggunakan metode studi pustaka komprehensif dan wawancara mendalam dengan tokoh agama serta masyarakat pengguna berbagai metode kontrasepsi, penelitian ini menemukan bahwa penggunaan kontrasepsi umumnya diperbolehkan dalam Islam. Ini terutama untuk tujuan menjaga kesehatan, menjarangkan kehamilan, dan memastikan kapasitas keluarga dalam memberikan pengasuhan yang optimal, asalkan tidak bersifat permanen. Namun, implementasinya masih menghadapi tantangan signifikan seperti stigma sosial, kurangnya pengetahuan akurat tentang hukum Islam dan manfaatnya, serta dukungan suami yang belum merata, yang mencerminkan adanya kesenjangan gender. Oleh karena itu, kesimpulan penelitian ini menekankan pentingnya edukasi yang lebih baik mengenai manfaat kontrasepsi dari perspektif medis dan syariat. Perlunya dukungan aktif dari tokoh agama juga esensial untuk meningkatkan penerimaan masyarakat terhadap praktik keluarga berencana yang selaras dengan nilai-nilai Islam, demi tercapainya keluarga yang lebih sejahtera dan masyarakat yang berdaya.
DOI: 10.15151/esrf-es-2190443164
title: XAS investigation of CuInS2 synthesis

description: Aim of the proposal is to explore the synthesis pathway of CuInS2, starting from the CuCl2 and InCl2 precursors, to shed light on the intermediate phases formation.
DOI: 10.15468/dl.fcyuqv
title: Occurrence Download

description: A dataset containing 1879 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eratigena agrestis (Walckenaer, 1802)"
 ]
}

 The dataset includes 1879 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024349-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nndyvy
title: Occurrence Download

description: A dataset containing 19070 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepisosteus osseus (Linnaeus, 1758)"
 ]
}

 The dataset includes 19070 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058709-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ndn423
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Oman",
 "TaxonKey is Chiroptera"
 ]
}

 The dataset includes 30 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013567-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8j8e71
title: Occurrence Download

description: A dataset containing 7884 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Arthrostemma ciliatum Ruiz & Pav.",
 "TaxonKey is Arthurdendyus triangulatus (Dendy, 1895)",
 "TaxonKey is Atriplex nummularia Lindl.",
 "TaxonKey is Artocarpus heterophyllus Lam.",
 "TaxonKey is Artocarpus integer (Thunb.) Merr.",
 "TaxonKey is Aruncus dioicus var. kamtschaticus (Maxim.) H.Hara",
 "TaxonKey is Artocarpus tonkinensis A.Chev."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7884 records from 177 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011326-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3v86p4
title: Occurrence Download

description: A dataset containing 944 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "TaxonKey is Veturius Kaup, 1871",
 "TaxonKey is Passalus Fabricius, 1792",
 "TaxonKey is Cis Latreille, 1797",
 "TaxonKey is Mycetophagus Fabricius, 1792",
 "TaxonKey is Stilbus Seidlitz, 1872",
 "TaxonKey is Acylomus Sharp, 1888",
 "TaxonKey is Nosotetocus Scudder, 1892",
 "TaxonKey is Nosodendron Latreille, 1804"
 ]
 }
 ]
}

 The dataset includes 944 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068791-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4rj3o5
title: Occurrence Download

description: A dataset containing 130359 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-81.95801 -6.48998,-64.55566 -6.48998,-64.55566 13.75272,-81.95801 13.75272,-81.95801 -6.48998))",
 "TaxonKey is Mammalia",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 130359 records from 186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013568-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.anv6dk
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calyptommatus leiolepis Rodrigues, 1991"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011326-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ph4axg
title: Occurrence Download

description: A dataset containing 2047 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Abronia umbellata Lam."
 ]
}

 The dataset includes 2047 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015504-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9nfo0s
title: Occurrence Download

description: A dataset containing 2377 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Cercis siliquastrum L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2377 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013568-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zh4upq
title: Occurrence Download

description: A dataset containing 689859 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-80.3 24.5,-80.2 24.5,-80.2 28,-80.3 28,-80.3 24.5))",
 "HasCoordinate is true",
 "TaxonKey is Actinopterygii",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 689859 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011326-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.syzvri
title: Occurrence Download

description: A dataset containing 2214 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scilla siberica Haw."
 ]
}

 The dataset includes 2214 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006986-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x8jhqo
title: Occurrence Download

description: A dataset containing 8893 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Puma concolor (Linnaeus, 1771)"
 ]
}

 The dataset includes 8893 records from 188 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013569-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9vwvty
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-81.41468 -4.24164,-72.40203 -4.24164,-72.40203 1.10151,-81.41468 1.10151,-81.41468 -4.24164))",
 "HasCoordinate is true",
 "TaxonKey is Tremarctos ornatus (F.G.Cuvier, 1825)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 21 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011327-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.njwjwt
title: Occurrence Download

description: A dataset containing 7187 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Occurrences of Threatened Species included in the Third Edition of the Red Data Book of the Komi Republic (Russia)"
 ]
}

 The dataset includes 7187 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068793-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kdeuu8
title: Occurrence Download

description: A dataset containing 16375 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Year 1950-2018",
 "TaxonKey is Trogon elegans Gould, 1834"
 ]
}

 The dataset includes 16375 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011327-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vujhy9
title: Occurrence Download

description: A dataset containing 6176 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Hesperis pycnotricha Borbás",
 "TaxonKey is Hesperis tristis L.",
 "TaxonKey is Heteranthelium piliferum (Sol.) Hochst. ex Jaub. & Spach",
 "TaxonKey is Heteranthemis viscidehirta Schott",
 "TaxonKey is Heteranthemis viscidi-hirta Schott",
 "TaxonKey is Heteranthera limosa (Sw.) Willd.",
 "TaxonKey is Heteranthera reniformis Ruiz & Pav.",
 "TaxonKey is Heteranthera rotundifolia (Kunth) Griseb.",
 "TaxonKey is Heteranthera zosterifolia Mart.",
 "TaxonKey is Heterobostrychus aequalis (Waterhouse, 1884)",
 "TaxonKey is Heterobostrychus brunneus (Murray, 1867)",
 "TaxonKey is Heterobostrychus hamatipennis (Lesne, 1895)",
 "TaxonKey is Heterocentron subtriplinervium (Link & Otto) A.Braun & Bouché",
 "TaxonKey is Heterodera avenae Wollenweber, 1924",
 "TaxonKey is Heterodontus zebra (Gray, 1831)",
 "TaxonKey is Heterogaster urticae (Fabricius, 1775)",
 "TaxonKey is Rhithropanopeus harrisii (Gould, 1841)",
 "TaxonKey is Heteropneustes fossilis (Bloch, 1794)"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6176 records from 329 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013569-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u9smcz
title: Occurrence Download

description: A dataset containing 1850 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pinus flexilis E.James"
 ]
}

 The dataset includes 1850 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015492-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j9dcpm
title: Occurrence Download

description: A dataset containing 1432603 species occurrences available in GBIF matching the query:
{
 "BasisOfRecord" : [
 "is Living Specimen"
 ]
}

 The dataset includes 1432603 records from 276 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013569-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh0196179.10fu
title: SH0196179.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0196180.10fu
title: SH0196180.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0196181.10fu
title: SH0196181.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0196182.10fu
title: SH0196182.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.