cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57745/nyupmo
title: 15_AoI.dbf

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DOI: 10.57745/suwqcf
title: 06_AoI.shx

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DOI: 10.57745/am1vo4
title: 16_ALS.laz

description: :unav
DOI: 10.57745/vfzpe6
title: 11_Ref.shp

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DOI: 10.57745/asvscm
title: 15_Ref.shx

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DOI: 10.57745/weigkp
title: 09_DTM.tif

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DOI: 10.57745/0anktj
title: 09_Ref.dbf

description: :unav
DOI: 10.57745/6htkhu
title: 04_Ref.shx

description: :unav
DOI: 10.57745/emkygo
title: 15-18_Metadata.pdf

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DOI: 10.57745/gdiqyr
title: 07_Ref.shx

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DOI: 10.57745/w32nri
title: 17_ALS.laz

description: :unav
DOI: 10.57745/xib3az
title: 08_Metadata.pdf

description: :unav
DOI: 10.57745/r1vruj
title: 15_ALS.laz

description: :unav
DOI: 10.57745/wyzgiz
title: 02_Metadata.pdf

description: :unav
DOI: 10.57745/zhwito
title: 07_AoI.dbf

description: :unav
DOI: 10.57745/bdkfqv
title: 18_AoI.dbf

description: :unav
DOI: 10.57745/2qwzqo
title: 10_Metadata.pdf

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DOI: 10.57745/9terzh
title: 04_ALS.laz

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DOI: 10.57745/051em3
title: 02_Ref.shx

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DOI: 10.57745/q5y8es
title: 03_Ref.shx

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DOI: 10.57745/fwzx2c
title: 06_Metadata.pdf

description: :unav
DOI: 10.57745/atvat5
title: 07_Metadata.pdf

description: :unav
DOI: 10.57745/wcazvy
title: 11_AoI.shx

description: :unav
DOI: 10.57745/cxban9
title: 17_AoI.shx

description: :unav
DOI: 10.57745/ycpuda
title: 08_ALS.laz

description: :unav
DOI: 10.57745/arglhd
title: 15_Ref.dbf

description: :unav
DOI: 10.57745/qy0pit
title: 03_ALS.laz

description: :unav
DOI: 10.57745/wwymjh
title: 11_Ref.shx

description: :unav
DOI: 10.57745/usiroc
title: 17_DTM.tif

description: :unav
DOI: 10.57745/ywonnh
title: 07_Ref.dbf

description: :unav
DOI: 10.57745/vjfrjn
title: 01_Ref.shp

description: :unav
DOI: 10.57745/buc9lb
title: 08_AoI.shp

description: :unav
DOI: 10.57745/tb4xna
title: 06_DTM.tif

description: :unav
DOI: 10.57745/9k7fxa
title: 08_Ref.shp

description: :unav
DOI: 10.57745/uoredi
title: 07_ALS.laz

description: :unav
DOI: 10.57745/6sxl4b
title: 11_DTM.tif

description: :unav
DOI: 10.57745/xik7oz
title: 02_AoI.dbf

description: :unav
DOI: 10.57745/skceol
title: 17_Ref.shp

description: :unav
DOI: 10.57745/srdkck
title: 08_Ref.dbf

description: :unav
DOI: 10.57745/3ydzrv
title: 17_Ref.dbf

description: :unav
DOI: 10.57745/7d0vhs
title: 16_AoI.shp

description: :unav
DOI: 10.57745/sfbfxc
title: 16_Ref.dbf

description: :unav
DOI: 10.57745/dswtxs
title: 11_ALS.laz

description: :unav
DOI: 10.57745/paojng
title: 02_DTM.tif

description: :unav
DOI: 10.57745/2fi63e
title: 17_AoI.shp

description: :unav
DOI: 10.57745/dmrtqq
title: 04_Metadata.pdf

description: :unav
DOI: 10.57745/ol5pc1
title: 16_Ref.shx

description: :unav
DOI: 10.57745/yozmct
title: 10_Ref.shx

description: :unav
DOI: 10.57745/vpmoue
title: 16_AoI.dbf

description: :unav
DOI: 10.57745/uustac
title: 18_ALS.laz

description: :unav
DOI: 10.57745/ctbo3i
title: 16_Ref.shp

description: :unav
DOI: 10.57745/fa6mup
title: 11_AoI.dbf

description: :unav
DOI: 10.57745/1wpnhr
title: 02_AoI.shx

description: :unav
DOI: 10.57745/liay2u
title: 17_Ref.shx

description: :unav
DOI: 10.57745/fnlywz
title: 07_AoI.shp

description: :unav
DOI: 10.57745/qg60sa
title: 15_AoI.shx

description: :unav
DOI: 10.57745/3izpbw
title: 18_Ref.dbf

description: :unav
DOI: 10.57745/zeyu3y
title: 08_Ref.shx

description: :unav
DOI: 10.57745/onucob
title: 11_AoI.shp

description: :unav
DOI: 10.57745/iydfs0
title: 01_DTM.tif

description: :unav
DOI: 10.57745/uin0rv
title: 10_Ref.shp

description: :unav
DOI: 10.57745/jdsjob
title: 07_DTM.tif

description: :unav
DOI: 10.25346/s6/x5xi7f/vvriyn
title: hydria.OBJ
DOI: 10.25346/s6/x5xi7f/4tvwlh
title: hydria.ply
DOI: 10.6084/m9.figshare.7125860.v1
title: Additional file 6: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: GO term enrichment analysis in the differentially expressed transcripts resulting from comparing samples of apomictic accessions (R35 and A36) to samples of the mutant accession (lop138). (XLSX 4571 kb)
DOI: 10.6084/m9.figshare.7125842
title: Additional file 5: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Differential expression analysis to discover differences associated with quiescent embryo sac in lop138 relative to R35. (XLSX 2718 kb)
DOI: 10.6084/m9.figshare.7125842.v1
title: Additional file 5: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Differential expression analysis to discover differences associated with quiescent embryo sac in lop138 relative to R35. (XLSX 2718 kb)
DOI: 10.6084/m9.figshare.7125833
title: Additional file 4: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Differential expression analysis to discover changes associated with sexually-induced seed development in lop138. (XLSX 2077 kb)
DOI: 10.6084/m9.figshare.7125833.v1
title: Additional file 4: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Differential expression analysis to discover changes associated with sexually-induced seed development in lop138. (XLSX 2077 kb)
DOI: 10.6084/m9.figshare.7125824
title: Additional file 3: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Differential expression analysis to discover changes associated with apomictic seed development in R35. (XLSX 1028 kb)
DOI: 10.6084/m9.figshare.7125824.v1
title: Additional file 3: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Differential expression analysis to discover changes associated with apomictic seed development in R35. (XLSX 1028 kb)
DOI: 10.6084/m9.figshare.7125812
title: Additional file 2: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Differential expression analysis to discover changes associated with parthenogenesis in R35. (XLSX 256 kb)
DOI: 10.6084/m9.figshare.7125812.v1
title: Additional file 2: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Differential expression analysis to discover changes associated with parthenogenesis in R35. (XLSX 256 kb)
DOI: 10.6084/m9.figshare.7125797
title: Additional file 2: of Molecular dynamics and structure function analysis show that substrate binding and specificity are major forces in the functional diversification of Eqolisins

description: Complete Preliminary Multiple Sequence Alignment. (FAA 354 kb)
DOI: 10.6084/m9.figshare.7125797.v1
title: Additional file 2: of Molecular dynamics and structure function analysis show that substrate binding and specificity are major forces in the functional diversification of Eqolisins

description: Complete Preliminary Multiple Sequence Alignment. (FAA 354 kb)
DOI: 10.6084/m9.figshare.7125770
title: Additional file 11: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Transcripts that are differentially expressed but identified as duplicates and removed from transcriptome during processing. (XLSX 68 kb)
DOI: 10.6084/m9.figshare.7125770.v1
title: Additional file 11: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: Transcripts that are differentially expressed but identified as duplicates and removed from transcriptome during processing. (XLSX 68 kb)
DOI: 10.6084/m9.figshare.7125764
title: Additional file 15: of Molecular dynamics and structure function analysis show that substrate binding and specificity are major forces in the functional diversification of Eqolisins

description: Abbreviations of species and their taxonomical distribution. (XLS 58 kb)
DOI: 10.6084/m9.figshare.7125764.v1
title: Additional file 15: of Molecular dynamics and structure function analysis show that substrate binding and specificity are major forces in the functional diversification of Eqolisins

description: Abbreviations of species and their taxonomical distribution. (XLS 58 kb)
DOI: 10.6084/m9.figshare.7125752
title: Additional file 14: of Molecular dynamics and structure function analysis show that substrate binding and specificity are major forces in the functional diversification of Eqolisins

description: Resume of the SDP identification by crossing SDPfox and Mistic analysis. (XLS 21 kb)
DOI: 10.6084/m9.figshare.7125752.v1
title: Additional file 14: of Molecular dynamics and structure function analysis show that substrate binding and specificity are major forces in the functional diversification of Eqolisins

description: Resume of the SDP identification by crossing SDPfox and Mistic analysis. (XLS 21 kb)
DOI: 10.6084/m9.figshare.7125746
title: Additional file 10: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: List of genes marking stages undergoing aposporous embryo sac development in R35. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.7125746.v1
title: Additional file 10: of Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant

description: List of genes marking stages undergoing aposporous embryo sac development in R35. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.7125737
title: Additional file 13: of Molecular dynamics and structure function analysis show that substrate binding and specificity are major forces in the functional diversification of Eqolisins

description: Complete Final Sequence Alignment. (FAA 379 kb)
DOI: 10.6084/m9.figshare.7125737.v1
title: Additional file 13: of Molecular dynamics and structure function analysis show that substrate binding and specificity are major forces in the functional diversification of Eqolisins

description: Complete Final Sequence Alignment. (FAA 379 kb)
DOI: 10.6084/m9.figshare.7125698
title: Additional file 2: of De novo assembly of middle-sized genome using MinION and Illumina sequencers

description: Table S1. Summary of sequencing using MinION. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.7125698.v1
title: Additional file 2: of De novo assembly of middle-sized genome using MinION and Illumina sequencers

description: Table S1. Summary of sequencing using MinION. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.7125692
title: Additional file 1: of Charcot neuroarthropathy patient education among podiatrists in Scotland: a modified Delphi approach

description: Appendix S1. Round One Questionnaire. Appendix S2: Initial Tree Diagram [19]. Appendix S3. Floral Arrangement. Appendix S4. Round One Results. Appendix S5. Round Two Questionnaire. (ZIP 4585 kb)
DOI: 10.6084/m9.figshare.7125692.v1
title: Additional file 1: of Charcot neuroarthropathy patient education among podiatrists in Scotland: a modified Delphi approach

description: Appendix S1. Round One Questionnaire. Appendix S2: Initial Tree Diagram [19]. Appendix S3. Floral Arrangement. Appendix S4. Round One Results. Appendix S5. Round Two Questionnaire. (ZIP 4585 kb)
DOI: 10.6084/m9.figshare.7125671
title: Additional file 3: of Evaluating the current state of Mendelian randomization studies: a protocol for a systematic review on methodological and clinical aspects using neurodegenerative disorders as outcome

description: Inclusion and exclusion criteria. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.7125671.v1
title: Additional file 3: of Evaluating the current state of Mendelian randomization studies: a protocol for a systematic review on methodological and clinical aspects using neurodegenerative disorders as outcome

description: Inclusion and exclusion criteria. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.7125659
title: Additional file 2: of Evaluating the current state of Mendelian randomization studies: a protocol for a systematic review on methodological and clinical aspects using neurodegenerative disorders as outcome

description: Data abstraction form. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7125659.v1
title: Additional file 2: of Evaluating the current state of Mendelian randomization studies: a protocol for a systematic review on methodological and clinical aspects using neurodegenerative disorders as outcome

description: Data abstraction form. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7125614
title: Cattle (Bos taurus) high resolution movement paths on the Bauges Mountains (France)

description: Seven 10-hour cattle movement tracks at 1Hz resolution. Cattle data were collected in July 2017 from a group of cows from the French Alps in the Bauges Mountains (Massif des Bauges, 45.69°N, 6.14°196 E). The cattle were tagged with Daily Diary tags (with tri-axial accelerometers and magnetometers; Wildbytes Technologies http://www.wildbyte-technologies.com and Gipsy-5 tags; TechnoSmArt Tracking Systems http://www.technosmart.eu), placed inside custom-built 3D printed ABS plastic housings and attached to commercial nylon cow collars (Fearing Lifestyles, Durham, UK). The accelerometer readings were recorded at a frequency of 20Hz approximately and 6Hz for the magnetometer readings. Both were subsampled to 1Hz, whereas GPS readings were recorded every 15 minutes. The path was then reconstructed using Framework4 (Walker et al., 2015), which uses the Dead Reckoning procedure (Bidder et al., 2015).The data are part of the larger project ALPEN ("Alpine Ungulate Movements") led by Luca Börger, Rowan Brown, Rory Wilson (Swansea University), Anne Loison (Laboratoire d'Ecologie Alpine, UMR CNRS 5553, Universite de Savoie) and Mathieu Garel (Office National de la Chasse et de la Faune Sauvage) with biologging data collection led by Swansea University. Data collection and dead-reckoning was done by James Redcliffe, using the Framework 4 software, with data pre-processing using the DDMT software (Wildbyte Technologies Ltd). We thank the cow owner, Patrice Ferrand.
DOI: 10.6084/m9.figshare.7125614.v2
title: Cattle (Bos taurus) high resolution movement paths on the Bauges Mountains (France)

description: Seven 10-hour cattle movement tracks at 1Hz resolution. Cattle data were collected in July 2017 from a group of cows from the French Alps in the Bauges Mountains (Massif des Bauges, 45.69°N, 6.14°196 E). The cattle were tagged with Daily Diary tags (with tri-axial accelerometers and magnetometers; Wildbytes Technologies http://www.wildbyte-technologies.com and Gipsy-5 tags; TechnoSmArt Tracking Systems http://www.technosmart.eu), placed inside custom-built 3D printed ABS plastic housings and attached to commercial nylon cow collars (Fearing Lifestyles, Durham, UK). The accelerometer readings were recorded at a frequency of 20Hz approximately and 6Hz for the magnetometer readings. Both were subsampled to 1Hz, whereas GPS readings were recorded every 15 minutes. The path was then reconstructed using Framework4 (Walker et al., 2015), which uses the Dead Reckoning procedure (Bidder et al., 2015).The data are part of the larger project ALPEN ("Alpine Ungulate Movements") led by Luca Börger, Rowan Brown, Rory Wilson (Swansea University), Anne Loison (Laboratoire d'Ecologie Alpine, UMR CNRS 5553, Universite de Savoie) and Mathieu Garel (Office National de la Chasse et de la Faune Sauvage) with biologging data collection led by Swansea University. Data collection and dead-reckoning was done by James Redcliffe, using the Framework 4 software, with data pre-processing using the DDMT software (Wildbyte Technologies Ltd). We thank the cow owner, Patrice Ferrand.
DOI: 10.6084/m9.figshare.7125614.v1
title: Cattle (Bos taurus) high resolution movement paths on Round Island (Mauritius)

description: Seven 10-hour cattle movement tracks at 1Hz resolution. Cattle data were collected in July 2017 from a group of cows from the French Alps in the Bauges Mountains (Massif des Bauges, 45.69°N, 6.14°196 E). The cattle were tagged with Daily Diary tags (with tri-axial accelerometers and magnetometers; Wildbytes Technologies http://www.wildbyte-technologies.com and Gipsy-5 tags; TechnoSmArt Tracking Systems http://www.technosmart.eu), placed inside custom-built 3D printed ABS plastic housings and attached to commercial nylon cow collars (Fearing Lifestyles, Durham, UK). The accelerometer readings were recorded at a frequency of 20Hz approximately and 6Hz for the magnetometer readings. Both were subsampled to 1Hz, whereas GPS readings were recorded every 15 minutes. The path was then reconstructed using Framework4 (Walker et al., 2015), which uses the Dead Reckoning procedure (Bidder et al., 2015).The data are part of the larger project ALPEN ("Alpine Ungulate Movements") led by Luca Börger, Rowan Brown, Rory Wilson (Swansea University), Anne Loison (Laboratoire d'Ecologie Alpine, UMR CNRS 5553, Universite de Savoie) and Mathieu Garel (O ce National de la Chasse et de la Faune Sauvage) with biologging data collection led by Swansea University. Data collection and dead-reckoning was done by James Redcliffe, using the Framework 4 software, with data pre-processing using the DDMT software (Wildbyte Technologies Ltd). We thank the cow owner, Patrice Ferrand.
DOI: 10.6084/m9.figshare.7125533
title: Identification of key genes and functional coexpression modules in ulcerative colitis by gene datasets analysis

description: <b><i>Background/Aims</i></b><b><i>:</i></b>Ulcerative colitis is a type of inflammatory bowel disease posing a great threat to the public health worldwide.Previously, gene expression studies of mucosal colonic biopsies have provided some insight into the pathophysiological mechanisms in ulcerative colitis; however, the exact pathogenesis is unclear. This study aimed to identify key genes and pathways associated with ulcerative colitis by bioinformatics analysis.<b><i>Methods</i></b><b><i>:</i></b>Genome-wide gene expression datasets involving ulcerative colitis patients were collected from gene expression omnibus database. To identify key genes, an integrated analysis of gene expression signature was performed by employing robust rank aggregation method. We used weighted gene coexpression network analysis to explore the functional modules involved in ulcerative colitis pathogenesis. Besides, biological process and pathways analysis of co-expression modules were figured out by gene ontology enrichment analysis using metascape.<b><i>Results</i></b><i>:</i>328 ulcerative colitis patients and 138 healthy controls were from fourtreen datasets. MMP1 and AQP8 were two key genes screened from the differentially genes. Seven main functional modules were identified, of which the blue modules included 1718 genes and mainly enriched in extracellular matrix organization, lymphocyte activation, blood vessel morphogenesis, leukocyte migration and inflammatory response,and the salmon module enriched in interferon signaling,defense response to virus and herpes simplex infection. There were also several other meaningful functional modules which were involved in many biological processes.<b><i>Conclusions</i></b><i>:</i>The present study identifies a number of key genes and pathways involved in the progress of ulcerative colitis,which deepens the understanding of the molecular mechanism and provides theoretical foundation for molecular target therapy.<i></i><sub></sub><sup></sup><i></i><sub></sub><sup></sup><br>
DOI: 10.6084/m9.figshare.7125533.v1
title: UC-supplementary_materials.doc

description: <b><i>Background/Aims:</i></b>Ulcerative colitis is a type of inflammatory bowel disease posing a great threat to the public health worldwide.Previously, gene expression studies of mucosal colonic biopsies have provided some insight into the pathophysiological mechanisms in ulcerative colitis; however, the exact pathogenesis is unclear. This study aimed to identify key genes and pathways associated with ulcerative colitis by bioinformatics analysis.<b><i>Methods:</i></b>Genome-wide gene expression datasets involving ulcerative colitis patients were collected from gene expression omnibus database. To identify key genes, an integrated analysis of gene expression signature was performed by employing robust rank aggregation method. We used weighted gene coexpression network analysis to explore the functional modules involved in ulcerative colitis pathogenesis. Besides, biological process and pathways analysis of co-expression modules were figured out by gene ontology enrichment analysis using metascape.<b><i>Results:</i></b>328 ulcerative colitis patients and 138 healthy controls were from fourtreen datasets. MMP1 and AQP8 were two key genes screened from the differentially genes. Seven main functional modules were identified, of which the blue modules included 1718 genes and mainly enriched in extracellular matrix organization, lymphocyte activation, blood vessel morphogenesis, leukocyte migration and inflammatory response,and the salmon module enriched in interferon signaling,defense response to virus and herpes simplex infection. There were also several other meaningful functional modules which were involved in many biological processes.<b><i>Conclusions:</i></b>The present study identifies a number of key genes and pathways involved in the progress of ulcerative colitis,which deepens the understanding of the molecular mechanism and provides theoretical foundation for molecular target therapy.
DOI: 10.6084/m9.figshare.7125419
title: Probability as a Foundation for Data Uncertainty: Applications in Remote Sensing

description: Presented at the ESIP 2018 Summer meeting in Tucson, AZ.<br>
DOI: 10.6084/m9.figshare.7125419.v1
title: Probability as a Foundation for Data Uncertainty: Applications in Remote Sensing

description: Presented at the ESIP 2018 Summer meeting in Tucson, AZ.<br>
DOI: 10.6084/m9.figshare.7125404.v2
title: Paywall the movie: the business of scholarship

description: This visual note was made based on Paywall the movie, created by Jason Schmitt.<br>
DOI: 10.6084/m9.figshare.7125095
title: subj_adjmat.mat

description: 90 x 8 x 16 (source, source, subject) phase lag index data matrices for each subject averaged over time (0 - 400 ms).
DOI: 10.6084/m9.figshare.7125095.v1
title: subj_adjmat.mat

description: 90 x 8 x 16 (source, source, subject) phase lag index data matrices for each subject averaged over time (0 - 400 ms).
DOI: 10.6084/m9.figshare.7125077
title: Taxonomy and phylogeny of <i>Macrolepiota</i>: two new species from Brazil

description: <i>Macrolepiota</i> is a poorly known genus in the Neotropics. In order to increase knowledge about this group, we collected specimens from the Atlantic Forest in southern and northeastern Brazil. <i>Macrolepiota cyanolamellata</i> and <i>M. sabulosa</i> from subtropical and tropical regions, respectively, are proposed as new species. We performed molecular phylogenetic analyses of the nuc rDNA internal transcribed spacer region ITS1-5.8S-ITS2 (ITS) and the combined data set ITS + nuclear large subunit rDNA (28S) + RNA polymerase II second largest (<i>RPB2</i>), as well as morphological analyses. Two lineages with unique morphotypes were found. The species proposed were strongly supported as the sister lineage closely related to <i>M. clelandii</i> and <i>M. subcitrophylla</i>. Detailed descriptions and illustrations of their macro- and microscopic characters are provided.
DOI: 10.6084/m9.figshare.7125065
title: Biological data

description: <b>Diameter of inhibition of bacterial growth in millimeters and </b><b>Mass in grams of the compounds used to test the bactericidal activity</b><b><br></b><br>