cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24708246
title: LCDB5_landuse_classes.csvEffects of catchment land use on temperate mangrove forests

description:   
Human land use changes are threatening the integrity and health of coastal ecosystems worldwide. Intensified land use for anthropogenic purposes increases sedimentation rates, pollutants, and nutrient concentrations into adjacent coastal areas, often with detrimental effects on marine life and ecosystem functioning. However, how these factors interact to influence ecosystem health in mangrove forests is poorly understood. This study investigates the effects of catchment human land use on mangrove forest architecture and sedimentary attributes at a landscape-scale. Thirty sites were selected along a gradient of human land use within a narrow latitudinal range, to minimise the effects of varying climatic conditions. Land use was quantified using spatial analysis tools with existing land use databases (LCDB5). Twenty-six forest architectural and sedimentary variables were collected from each site. The results revealed a significant effect of human land use on ten out of 26 environmental variables.
Eutrophication, characterised by changes in redox potential, pH, and sediment nutrient concentrations, was strongly associated with increasing human land use. The δ15N values of sediments and leaves also indicated increased anthropogenic nitrogen input. Furthermore, the study identified a positive correlation between human land use and tree density, indicating that increased nutrient delivery from catchments contributes to enhanced mangrove growth. Propagule and seedling densities were also positively correlated with human land use, suggesting potential recruitment success mechanisms. This research underpins the complex interactions between human land use and mangrove ecosystems, revealing changes in carbon dynamics, potential alterations in ecosystem services, and a need for holistic management approaches that consider the interconnectedness of species and their environment. These findings provide essential insights for regional ecosystem models, coastal management, and restoration strategies to address the impacts of human pressures on temperate mangrove forests, even in estuaries that may be relatively healthy.
DOI: 10.15468/dl.rre7c7
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pentanema nematolepis Rech.fil."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072527-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mc5f23
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllanthus cacuminum Müll.Arg."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072526-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ceuufz
title: Occurrence Download

description: A dataset containing 4084 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pistacia vera L."
 ]
}

 The dataset includes 4084 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072528-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.njrfbh
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pilea penninervis C.J.Chen"
 ]
}

 The dataset includes 15 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072530-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j4ajwt
title: Occurrence Download

description: A dataset containing 16892 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Invasive species - American bullfrog (Lithobates catesbeianus) in Flanders, Belgium, Invasive species - American bullfrog (Lithobates catesbeianus) in Flanders, Belgium (post 2018))",
 "TaxonKey is Lithobates catesbeianus (Shaw, 1802)"
 ]
}

 The dataset includes 16892 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072529-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avfhvx
title: Occurrence Download

description: A dataset containing 361 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phaulopsis dorsiflora (Retz.) Santapau"
 ]
}

 The dataset includes 361 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072531-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8pf88q
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peucedanum anamallayense C.B.Clarke"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072532-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kwdvkc
title: Occurrence Download

description: A dataset containing 1859 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pentanema oculus-christi (L.) D.Gut.Larr., Santos-Vicente, Anderb., E.Rico & M.M.Mart.Ort."
 ]
}

 The dataset includes 1859 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072533-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nc7vq8
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllanthus caesiifolius Petra Hoffm. & Cheek"
 ]
}

 The dataset includes 9 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072534-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8azzhq
title: Occurrence Download

description: A dataset containing 663 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-111.08304 44.04427,-109.84819 44.04427,-109.84819 45.17809,-111.08304 45.17809,-111.08304 44.04427))",
 "TaxonKey is Falco peregrinus Tunstall, 1771",
 "Year 2000-2024"
 ]
}

 The dataset includes 663 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072535-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pcqvya
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pilea peperomioides Diels"
 ]
}

 The dataset includes 44 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072537-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9dsmud
title: Occurrence Download

description: A dataset containing 3690 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peucedanum austriacum (Jacq.) W.D.J.Koch"
 ]
}

 The dataset includes 3690 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072538-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57ve3v
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phaulopsis gediensis Mankt."
 ]
}

 The dataset includes 45 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072539-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8mtbun
title: Occurrence Download

description: A dataset containing 21282 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pistia stratiotes L."
 ]
}

 The dataset includes 21282 records from 613 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072540-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.13106294.v1
title: Additional file 12 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 12: Table S12. GO functional enrichment of the candidate genes obtained by XP-EHH analysis associated with the drought environment adaptations.
DOI: 10.6084/m9.figshare.13106318
title: Additional file 3 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 3: Table S3. Summary of sequence data generated in this study.
DOI: 10.6084/m9.figshare.13106315.v1
title: Additional file 2 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 2: Table S2. The explanation of parameters in samtools ‘mpileup’ command used for SNP calling.
DOI: 10.6084/m9.figshare.13106291
title: Additional file 11 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 11: Table S11. GO functional enrichment of the candidate genes obtained by FST- θπ ratio analysis that are associated with adaptation to arid environments.
DOI: 10.6084/m9.figshare.13106321.v1
title: Additional file 4 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 4: Table S4. Statistics for mapping rate and coverage of samples analyzed in this study.
DOI: 10.6084/m9.figshare.13106291.v1
title: Additional file 11 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 11: Table S11. GO functional enrichment of the candidate genes obtained by FST- θπ ratio analysis that are associated with adaptation to arid environments.
DOI: 10.6084/m9.figshare.13106294
title: Additional file 12 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 12: Table S12. GO functional enrichment of the candidate genes obtained by XP-EHH analysis associated with the drought environment adaptations.
DOI: 10.6084/m9.figshare.13106309
title: Additional file 17 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 17: Table S15. Top 30 KEGG pathway enrichment of the candidate genes obtained by FST- θπ ratio analysis associated with the drought environment adaptations.
DOI: 10.6084/m9.figshare.13106309.v1
title: Additional file 17 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 17: Table S15. Top 30 KEGG pathway enrichment of the candidate genes obtained by FST- θπ ratio analysis associated with the drought environment adaptations.
DOI: 10.6084/m9.figshare.13106330
title: Additional file 7 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 7: Table S7. Parameters inferred from the diffusion approximation for demographic inference (∂a∂i) approach.
DOI: 10.6084/m9.figshare.13106330.v1
title: Additional file 7 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 7: Table S7. Parameters inferred from the diffusion approximation for demographic inference (∂a∂i) approach.
DOI: 10.6084/m9.figshare.13106327.v1
title: Additional file 6 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 6: Table S6. Individual SNP statistics of Tarim red deer.
DOI: 10.6084/m9.figshare.13106324
title: Additional file 5 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 5: Table S5. SNP annotation statistics of Tarim red deer and Tule elk.
DOI: 10.6084/m9.figshare.13106312.v1
title: Additional file 1 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 1: Table S1. Identity, location, and sample type for Cervus elaphus yarkandensis and Cervus canadensis nannodes samples used in this study.
DOI: 10.6084/m9.figshare.13106324.v1
title: Additional file 5 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 5: Table S5. SNP annotation statistics of Tarim red deer and Tule elk.
DOI: 10.6084/m9.figshare.13106333
title: Additional file 8 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 8: Table S8. List of genes in the overlapping regions selected by the top 5% highest log2(θπ•control/θπ•Tarim red deer) and top 5% highest Z(FST) scores for Tarim red deer.
DOI: 10.6084/m9.figshare.13106315
title: Additional file 2 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 2: Table S2. The explanation of parameters in samtools ‘mpileup’ command used for SNP calling.
DOI: 10.6084/m9.figshare.13106318.v1
title: Additional file 3 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 3: Table S3. Summary of sequence data generated in this study.
DOI: 10.6084/m9.figshare.13106300
title: Additional file 14 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 14: Table S14. Summary statistics for genomic nucleotide diversity in different mammalian species.
DOI: 10.6084/m9.figshare.13106333.v1
title: Additional file 8 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 8: Table S8. List of genes in the overlapping regions selected by the top 5% highest log2(θπ•control/θπ•Tarim red deer) and top 5% highest Z(FST) scores for Tarim red deer.
DOI: 10.6084/m9.figshare.13106321
title: Additional file 4 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 4: Table S4. Statistics for mapping rate and coverage of samples analyzed in this study.
DOI: 10.6084/m9.figshare.13106327
title: Additional file 6 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 6: Table S6. Individual SNP statistics of Tarim red deer.
DOI: 10.6084/m9.figshare.13106336.v1
title: Additional file 9 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 9: Table S9. List of genes in the overlapping regions selected by the top 5% highest XP-EHH values for Tarim red deer in XP-EHH analyses.
DOI: 10.6084/m9.figshare.13106312
title: Additional file 1 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 1: Table S1. Identity, location, and sample type for Cervus elaphus yarkandensis and Cervus canadensis nannodes samples used in this study.
DOI: 10.6084/m9.figshare.13106348.v1
title: Additional file 1 of Forecasting yearly geomagnetic variation through sequential estimation of core flow and magnetic diffusion

description: Additional file 1. IGRF candidate SV model. Predicted average secular variation for 2020.0-2025.0, coefficients presented as spherical harmonic degree, order, dg/dt, dh/dt.
DOI: 10.6084/m9.figshare.13106336
title: Additional file 9 of Whole-genome sequencing of Tarim red deer (Cervus elaphus yarkandensis) reveals demographic history and adaptations to an arid-desert environment

description: Additional file 9: Table S9. List of genes in the overlapping regions selected by the top 5% highest XP-EHH values for Tarim red deer in XP-EHH analyses.
DOI: 10.6084/m9.figshare.13106348
title: Additional file 1 of Forecasting yearly geomagnetic variation through sequential estimation of core flow and magnetic diffusion

description: Additional file 1. IGRF candidate SV model. Predicted average secular variation for 2020.0-2025.0, coefficients presented as spherical harmonic degree, order, dg/dt, dh/dt.
DOI: 10.6084/m9.figshare.13106414.v1
title: Additional file 2 of Differences in larval survival and IgG response patterns in long-lasting infections by Trichinella spiralis, Trichinella britovi and Trichinella pseudospiralis in pigs

description: Additional file 2: Table S1. Mean number, standard deviation (SD) and 95% confidence interval (CI) of larvae per g (LPG) of Trichinella spiralis, Trichinella britovi and Trichinella pseudospiralis in experimentally infected pigs at different times post infection.
DOI: 10.6084/m9.figshare.13106417.v1
title: Additional file 1 of Examining the effector mechanisms of Xuebijing injection on COVID-19 based on network pharmacology

description: Additional file 1: Table S1. The detailed targets information. Table S2. 451drug targets of XBJ. Table S3. 251 coronavirus pneumonia targets. Table S4. 119 HCoV-associated host proteins. Table S5. 3525 genes co-expressed with ACE2. Table S6. 144 potential COVID-19 targets. Table S7. Network topology analysis results. Table S4. 119 HCoV-associated host proteins. Table S8. GO-BP results. Table S9. KEGG-pathways results. Table S10. Wiki-pathways results.
DOI: 10.6084/m9.figshare.13106414
title: Additional file 2 of Differences in larval survival and IgG response patterns in long-lasting infections by Trichinella spiralis, Trichinella britovi and Trichinella pseudospiralis in pigs

description: Additional file 2: Table S1. Mean number, standard deviation (SD) and 95% confidence interval (CI) of larvae per g (LPG) of Trichinella spiralis, Trichinella britovi and Trichinella pseudospiralis in experimentally infected pigs at different times post infection.
DOI: 10.6084/m9.figshare.13106417
title: Additional file 1 of Examining the effector mechanisms of Xuebijing injection on COVID-19 based on network pharmacology

description: Additional file 1: Table S1. The detailed targets information. Table S2. 451drug targets of XBJ. Table S3. 251 coronavirus pneumonia targets. Table S4. 119 HCoV-associated host proteins. Table S5. 3525 genes co-expressed with ACE2. Table S6. 144 potential COVID-19 targets. Table S7. Network topology analysis results. Table S4. 119 HCoV-associated host proteins. Table S8. GO-BP results. Table S9. KEGG-pathways results. Table S10. Wiki-pathways results.
DOI: 10.6084/m9.figshare.13106507
title: Additional file 1 of Automatic analysis of summary statements in virtual patients - a pilot study evaluating a machine learning approach

description: Additional file 1. Exemplary 50 summary statements with manual and automatic rating. The appendix contains 50 analyzed English summary statements with the manual and automatic rating based on the rubric and the time of the automatic assessments.
DOI: 10.6084/m9.figshare.13106507.v1
title: Additional file 1 of Automatic analysis of summary statements in virtual patients - a pilot study evaluating a machine learning approach

description: Additional file 1. Exemplary 50 summary statements with manual and automatic rating. The appendix contains 50 analyzed English summary statements with the manual and automatic rating based on the rubric and the time of the automatic assessments.
DOI: 10.6084/m9.figshare.13106529
title: Additional file 2 of Efficient and cost-effective bacterial mRNA sequencing from low input samples through ribosomal RNA depletion

description: Additional file 2.
DOI: 10.6084/m9.figshare.13106529.v1
title: Additional file 2 of Efficient and cost-effective bacterial mRNA sequencing from low input samples through ribosomal RNA depletion

description: Additional file 2.
DOI: 10.6084/m9.figshare.13106057.v1
title: R0309_20191107a_videos

description: Rat 0309, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13106057
title: R0309_20191107a_videos

description: Rat 0309, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12813944.v3
title: 3-D Model of Shanxi Rift

description: 3-D-MODEL-OF-Shanxi-Rift including Shanxi_phase.tar.gz, <br>Shanxi_group.taz.gz, Shanxi_HtoV.tar.gz, COR_SXR.7z and 3-D_Vs_model_Shanxi.tar.gz. <br><br>The digital data is described in Readme<br><br>
DOI: 10.5517/ccdc.csd.cc25717q
title: CCDC 2002762: Experimental Crystal Structure Determination

description: Related Article: Madhuri Dasari, Peipei Ma, Stephen C. Pelly, Savita K. Sharma, Dennis C. Liotta|2020|Bioorg.Med.Chem.Lett.|30|127539|doi:10.1016/j.bmcl.2020.127539
DOI: 10.5517/ccdc.csd.cc2571fx
title: CCDC 2002768: Experimental Crystal Structure Determination

description: Related Article: Claudia Feberero,  Carlos Sedano,  Samuel Suárez-Pantiga,  Carlos Silva López,  Roberto Sanz|2020|J.Org.Chem.|85|12561|doi:10.1021/acs.joc.0c01732
DOI: 10.5517/ccdc.csd.cc2571n4
title: CCDC 2002775: Experimental Crystal Structure Determination

description: Related Article: Madhuri Dasari, Peipei Ma, Stephen C. Pelly, Savita K. Sharma, Dennis C. Liotta|2020|Bioorg.Med.Chem.Lett.|30|127539|doi:10.1016/j.bmcl.2020.127539
DOI: 10.5517/ccdc.csd.cc2571p5
title: CCDC 2002776: Experimental Crystal Structure Determination

description: Related Article: Claudia Feberero,  Carlos Sedano,  Samuel Suárez-Pantiga,  Carlos Silva López,  Roberto Sanz|2020|J.Org.Chem.|85|12561|doi:10.1021/acs.joc.0c01732