cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.944798
title: Occurrence Download

description: A dataset containing 185073 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Albizia lebbeck (L.) Benth., Anredera cordifolia (Ten.) Steenis, Azadirachta indica A.Juss., Brassica nigra (L.) W.D.J.Koch, Carpobrotus edulis (L.) N.E.Br., Casuarina equisetifolia L., Rostraria litorea (All.) Holub, Colocasia esculenta (L.) Schott, Dactyloctenium aegyptium (L.) Willd., Dichrostachys cinerea (L.) Wight & Arn.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 185073 records from 1634 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112971-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id299514.1
title: StrainInfo SI-ID 299514.1

description: StrainInfo dataset 299514 about a strain of Clarireedia homoeocarpa. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.zxh9n2
title: Occurrence Download

description: A dataset containing 780415 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 780415 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005689-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id299515.1
title: StrainInfo SI-ID 299515.1

description: StrainInfo dataset 299515 about a strain of Clarireedia homoeocarpa. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299591.1
title: StrainInfo SI-ID 299591.1

description: StrainInfo dataset 299591 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299592.1
title: StrainInfo SI-ID 299592.1

description: StrainInfo dataset 299592 about a strain of Microsporum canis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299593.1
title: StrainInfo SI-ID 299593.1

description: StrainInfo dataset 299593 about a strain of Microsporum canis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299594.1
title: StrainInfo SI-ID 299594.1

description: StrainInfo dataset 299594 about a strain of Davidsoniella eucalypti. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299659.1
title: StrainInfo SI-ID 299659.1

description: StrainInfo dataset 299659 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299660.1
title: StrainInfo SI-ID 299660.1

description: StrainInfo dataset 299660 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299661.1
title: StrainInfo SI-ID 299661.1

description: StrainInfo dataset 299661 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.62q26f
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Percina williamsi Page & Near, 2007"
 ]
}

 The dataset includes 54 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0290427-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id299662.1
title: StrainInfo SI-ID 299662.1

description: StrainInfo dataset 299662 about a strain of Fusarium tricinctum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.6m5apv
title: Occurrence Download

description: A dataset containing 1998 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ilex ficoidea Hemsl."
 ]
}

 The dataset includes 1998 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084703-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id299516.1
title: StrainInfo SI-ID 299516.1

description: StrainInfo dataset 299516 about a strain of Clarireedia homoeocarpa. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299517.1
title: StrainInfo SI-ID 299517.1

description: StrainInfo dataset 299517 about a strain of Clarireedia homoeocarpa. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.yu1bye
title: Occurrence Download

description: A dataset containing 1961 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crotalus adamanteus Palisot De Beauvois, 1799"
 ]
}

 The dataset includes 1961 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064504-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id299518.1
title: StrainInfo SI-ID 299518.1

description: StrainInfo dataset 299518 about a strain of Gibberella fujikuroi var. moniliformis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299519.1
title: StrainInfo SI-ID 299519.1

description: StrainInfo dataset 299519 about a strain of Kluyveromyces lactis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299595.1
title: StrainInfo SI-ID 299595.1

description: StrainInfo dataset 299595 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299596.1
title: StrainInfo SI-ID 299596.1

description: StrainInfo dataset 299596 about a strain of Stenocarpella maydis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299597.1
title: StrainInfo SI-ID 299597.1

description: StrainInfo dataset 299597 about a strain of Quambalaria cyanescens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299598.1
title: StrainInfo SI-ID 299598.1

description: StrainInfo dataset 299598 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299663.1
title: StrainInfo SI-ID 299663.1

description: StrainInfo dataset 299663 about a strain of Trametes cinnabarina. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.26058097
title: Molecular and epigenetic <i>ex vivo</i> profiling of testis cancer-associated fibroblasts and their interaction with germ cell tumor cells and macrophages

description: <br>Germ cell tumors (GCT) are the most common solid tumors in young men of age 15 - 40. In previous studies, we profiled the interaction of GCT cells with cells of the tumor microenvironment (TM), which showed that especially the 3D interaction of fibroblasts (FB) or macrophages with GCT cells influenced the growth behavior and cisplatin response as well as the transcriptome and secretome of the tumor cells, suggesting that the crosstalk of these cells with GCT cells is crucial for tumor progression and therapy outcome. In this study, we shed light on the mechanisms of activation of cancer-associated fibroblasts (CAF) in the GCT setting and their effects on GCT cells lines and the monocyte cell line THP-1. <i>Ex vivo </i>cultures of GCT-derived CAF were established and characterized molecularly and epigenetically by performing DNA methylation arrays, RNA sequencing, and mass spectrometry-based secretome analysis. We demonstrated that the activation state of CAF is influenced by their former prevailing tumor environment in which they have resided. Hereby, we postulate that seminoma (SE) and embryonal carcinoma (EC) activate CAF, while teratoma (TER) play only a minor role in CAF formation. In turn, CAF influence proliferation and the expression of cisplatin sensitivity-related factors in GCT cells lines as well as polarization of <i>in vitro</i>-induced macrophages by the identified effector molecules IGFBP1, LGALS3BP, LYVE1, and PTX3. Our data suggests that the vital interaction of CAF with GCT cells and with macrophages has a huge influence on shaping the extracellular matrix as well as on recruitment of immune cells to the TM. In conclusion, therapeutically interfering with CAF and / or macrophages in addition to the standard therapy might slow-down progression of GCT and re-shaping of the TM to a tumor-promoting environment.
DOI: 10.6084/m9.figshare.26058097.v1
title: Molecular and epigenetic <i>ex vivo</i> profiling of testis cancer-associated fibroblasts and their interaction with germ cell tumor cells and macrophages

description: <br>Germ cell tumors (GCT) are the most common solid tumors in young men of age 15 - 40. In previous studies, we profiled the interaction of GCT cells with cells of the tumor microenvironment (TM), which showed that especially the 3D interaction of fibroblasts (FB) or macrophages with GCT cells influenced the growth behavior and cisplatin response as well as the transcriptome and secretome of the tumor cells, suggesting that the crosstalk of these cells with GCT cells is crucial for tumor progression and therapy outcome. In this study, we shed light on the mechanisms of activation of cancer-associated fibroblasts (CAF) in the GCT setting and their effects on GCT cells lines and the monocyte cell line THP-1. <i>Ex vivo </i>cultures of GCT-derived CAF were established and characterized molecularly and epigenetically by performing DNA methylation arrays, RNA sequencing, and mass spectrometry-based secretome analysis. We demonstrated that the activation state of CAF is influenced by their former prevailing tumor environment in which they have resided. Hereby, we postulate that seminoma (SE) and embryonal carcinoma (EC) activate CAF, while teratoma (TER) play only a minor role in CAF formation. In turn, CAF influence proliferation and the expression of cisplatin sensitivity-related factors in GCT cells lines as well as polarization of <i>in vitro</i>-induced macrophages by the identified effector molecules IGFBP1, LGALS3BP, LYVE1, and PTX3. Our data suggests that the vital interaction of CAF with GCT cells and with macrophages has a huge influence on shaping the extracellular matrix as well as on recruitment of immune cells to the TM. In conclusion, therapeutically interfering with CAF and / or macrophages in addition to the standard therapy might slow-down progression of GCT and re-shaping of the TM to a tumor-promoting environment.
DOI: 10.60712/si-id299664.1
title: StrainInfo SI-ID 299664.1

description: StrainInfo dataset 299664 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.ee8aqv
title: Occurrence Download

description: A dataset containing 1259 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhabdophis tigrinus (Boie, 1826)"
 ]
}

 The dataset includes 1259 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064664-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id299665.1
title: StrainInfo SI-ID 299665.1

description: StrainInfo dataset 299665 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299666.1
title: StrainInfo SI-ID 299666.1

description: StrainInfo dataset 299666 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.mfjxrb
title: Occurrence Download

description: A dataset containing 6949 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sinulariidae"
 ]
}

 The dataset includes 6949 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084705-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id299520.1
title: StrainInfo SI-ID 299520.1

description: StrainInfo dataset 299520 about a strain of Agaricus bisporus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.nd4yx7
title: Occurrence Download

description: A dataset containing 3119 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Siphonogorgiidae"
 ]
}

 The dataset includes 3119 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084706-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id299521.1
title: StrainInfo SI-ID 299521.1

description: StrainInfo dataset 299521 about a strain of Agaricus bisporus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.22e1ct
title: Occurrence Download

description: A dataset containing 200895 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Cambodia"
 ]
}

 The dataset includes 200895 records from 242 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020860-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id299522.1
title: StrainInfo SI-ID 299522.1

description: StrainInfo dataset 299522 about a strain of Agaricus bisporus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299523.1
title: StrainInfo SI-ID 299523.1

description: StrainInfo dataset 299523 about a strain of Agaricus bisporus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299599.1
title: StrainInfo SI-ID 299599.1

description: StrainInfo dataset 299599 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299600.1
title: StrainInfo SI-ID 299600.1

description: StrainInfo dataset 299600 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299601.1
title: StrainInfo SI-ID 299601.1

description: StrainInfo dataset 299601 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299602.1
title: StrainInfo SI-ID 299602.1

description: StrainInfo dataset 299602 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299667.1
title: StrainInfo SI-ID 299667.1

description: StrainInfo dataset 299667 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299668.1
title: StrainInfo SI-ID 299668.1

description: StrainInfo dataset 299668 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299669.1
title: StrainInfo SI-ID 299669.1

description: StrainInfo dataset 299669 about a strain of Saccharomyces cerevisiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299524.1
title: StrainInfo SI-ID 299524.1

description: StrainInfo dataset 299524 about a strain of Agaricus bisporus var. burnettii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299525.1
title: StrainInfo SI-ID 299525.1

description: StrainInfo dataset 299525 about a strain of Agaricus bisporus var. burnettii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id299526.1
title: StrainInfo SI-ID 299526.1

description: StrainInfo dataset 299526 about a strain of Agaricus bisporus var. burnettii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.q995um
title: Occurrence Download

description: A dataset containing 374164 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Senecio inaequidens DC.)"
 ]
}

 The dataset includes 374164 records from 1183 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084691-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2h3s3q
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Platyhelminthes",
 "DatasetKey is Conchological Society of Great Britain & Ireland: non-marine molluscs (Channel Islands)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-25.03991 31.75, 41.65954 31.75, 41.65954 71.53037, -25.03991 71.53037, -25.03991 31.75))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219532-230224095556074/datasets/export for details.
DOI: 10.15468/dl.rm2fyh
title: Occurrence Download

description: A dataset containing 69554 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corvus Linnaeus, 1758",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 69554 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010590-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.