cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.1242854
title: Spatial Autocorrelation And Entropy For Renewable Energy Forecasting

description: Additional resources of the paper "Spatial Autocorrelation and Entropy for Renewable Energy Forecasting".

The repository includes:

- Datasets;

- Prediction system and instructions;

- Additional experimental results.
DOI: 10.5281/zenodo.12683128
title: Data of Sherriff-Tadano et al. 2024 Climate of the Past

description: The zip file contains a csv files, which summarises all the parameter sets and results for creating figures, and simulation results of from BISICLES (ice sheet model) and FAMOUS (atmospheric model). It also contains the sea surface temperature file, which was used as the target for our slab ocean simulations.
DOI: 10.5281/zenodo.8392815
title: Obidos 2014 - part 1

description: In this repository, you will find data files collected by the Sontek RiverSurveyor® M9 Acoustic Doppler Current Profiler (ADCP), during multiple field deployments in the Amazon River mainstem near Obidos, in Pará, Brazil. These files include river velocity data collected on transects across the river that occurred on April 3, 2014 and July 29, 2014. File names starting with '20140403' correspond to data collected on April 3rd, while file names starting with '20140729' correspond to data collected on July 29th. In addition, you will find discrete samples collected on the mainstem and in the Tapajós River during April and July 2014, tabulated as such: Table 1 - Locations of large-volume (&gt;100 L) and depth-specific (10 L) samples collected in the Amazon River near Óbidos and in Tapajós River. The Óbidos samples were collected in three positions across the mainstem channel, referenced to the right bank across from Óbidos. Discharge, total suspended solid (TSS) and particulate organic carbon (POC) fluxes, and water temperatures are provided when available. In the sample depth column, “bed”=bedload and “flood”=floodplain deposit. Note that the 2005 data are taken from Bouchez et al. (2011) and Bouchez et al. (2014) - see references below. Table 2 - Total suspended sediment concentration, organic matter composition and grain size of all samples collected near Óbidos in 2014. Errors for C/N and δ<sup>13</sup>C<sub>POC</sub> are reported. Relative errors of depth-specific F<sub>m</sub> values are &lt; 3%, and are not reported. Note that “bed”=bedload and “flood”=floodplain deposit. Table 3 - Abundances and δ<sup>13</sup>C values of straight-chain <em>n</em>-alkanes (C<sub>19</sub>-C<sub>41</sub>) in large-volume (&gt;100 L) and depth-specific (10 L) samples collected in June 2005, April 2014 and July 2014. Table 4 - Abundances and δ<sup>13</sup>C values of fatty acids (C<sub>14</sub>-C<sub>34</sub>) from large-volume (&gt;100 L) and depth-specific (10 L) samples collected in June 2005, April 2014 and July 2014. Table 5 - Activities of eight enzymes measured on particles within the Óbidos cross-section in July 2014, along with an acronym guide. <strong>References</strong> Bouchez, Julien, F Métivier, M Lupker, Laurence Maurice, M Perez, J Gaillardet, and C France‐Lanord. 2011. ‘Prediction of Depth‐integrated Fluxes of Suspended Sediment in the Amazon River: Particle Aggregation as a Complicating Factor’. <em>Hydrological Processes</em> 25 (5): 778–94. Bouchez, Julien, Valier Galy, Robert G Hilton, Jérôme Gaillardet, Patricia Moreira-Turcq, Marcela Andrea Pérez, Christian France-Lanord, and Laurence Maurice. 2014. ‘Source, Transport and Fluxes of Amazon River Particulate Organic Carbon: Insights from River Sediment Depth-Profiles’. <em>Geochimica et Cosmochimica Acta</em> 133: 280–98.
DOI: 10.5291/ill-data.9-10-1740
title: Structure of interfacial layers in superspreading films
DOI: 10.6084/m9.figshare.21523530.v1
title: MISC Data Entry.xlsx

description: As a post-COVID complication in children, multisystem inflammatory syndrome in children (MIS-C) is important because of its varied and life-threatening manifestations. With this background, this study attempts to focus on MIS-C cases in an underprivileged rural setting in north-eastern India, with most patients being treated with methylprednisolone rather than intravenous immunoglobulin due to financial constraints<strong>. </strong> <em>Methods </em> In this prospective longitudinal cohort study at MGM Medical College, 27 MIS-C cases diagnosed following WHO criteria were included. Laboratory and radiological investigations, including echocardiography, were performed as required for diagnosis and to assess prognosis. Most patients were treated with methylprednisolone. A follow-up assessment was done six weeks after discharge for any residual impairment. <em>Results </em> The most frequently affected age group was 5–10 years (59.28%), while respiratory (48.14%) and cardiac (40.74%) were the most commonly involved systems. Logistic regression studies established a significant association between serum ferritin level and prolonged hospital stay (coefficient 0.0674, p=0.0041), possibly due to greater complications in cases with high ferritin levels. Organ impairment was found to increase the need for inotrope use (coefficient 3.8797, p=0.00584). Most cases were treated with methylprednisolone alone (85.18%) with a favourable response and no death occurred. <em><strong>Conclusion</strong></em> The favourable response in cases treated with methylprednisolone only affirms the effectiveness of the drug as a cheaper alternative in a resource-poor setting. The study highlights that higher ferritin levels in complicated cases leads to prolonged hospitalisation and the increased need for inotropes in cases with organ impairment.
DOI: 10.6084/m9.figshare.22300426
title: Qualitative raw data

description: This is qualitative data from the perspectives from multiple stakeholders.
DOI: 10.6084/m9.figshare.22674748.v3
title: Dendritic domain development

description: The files include data tables, Matlab and Python code and Jupyter Notebooks that were used to generate the figures of the manuscript "Clustered synapses develop in distinct dendritic domains in visual cortex before eye opening" by Leighton et al. in eLife. More information is available in readme.txt and 1_Main.jpynb.
DOI: 10.6084/m9.figshare.24942819
title: Supplementary Material for: Beurteilung und Förderung der arbeitsbezogenen Selbstwirksamkeitserwartung in der Psychotherapie: Ergebnisse einer Sekundäranalyse einer randomisiert-kontrollierten Studie

description: <b><i>Hintergrund:</i></b> Arbeitsbezogene Selbstwirksamkeitserwartungen (aSW) gelten als Prädiktor für eine erfolgreiche Rückkehr an den Arbeitsplatz bei Arbeitnehmenden mit psychischen Störungen. Spezifische Interventionen zur Förde­rung der aSW existieren bislang jedoch nicht. In der vorliegenden Sekundäranalyse wurde untersucht, ob ein neu entwickeltes kognitiv-imaginatives aSW-Modul geeignet erscheint, (1) imaginative Bewältigungserfahrungen zu erzeugen, (2) reale Bewältigungsbestrebungen vorzuberei­ten (Verhaltensrelevanz; VR) und (3) die aSW zu adressieren. <b><i>Methoden:</i></b> Das aSW-Modul wurde im Rahmen einer ar­beitsplatzbezogenen Kurzzeitintervention durchgeführt und videographiert (<i>N</i> = 22). Die aSW und Indikatoren für imaginative Bewältigungserfahrungen (IB) sowie für die VR wurden anhand der Videoaufzeichnungen durch unabhängige Beurteiler:innen eingeschätzt. Zusätzlich erfolgten Selbstbeurteilungen der aSW vor Behandlungsbeginn und zum Zeitpunkt des aSW-Moduls. <b><i>Ergebnisse:</i></b> Alle IB-Indikatoren (Kooperation, Lebhaftigkeit, emotionale Beteiligung, kognitive Flexibilität) waren eher hoch ausgeprägt. Bezüglich der VR-Indikatoren zeigte sich, dass Erkenntnisgewinne mode­rat, Intentionen für Verhaltensänderungen eher hoch und die Identifikation von erfolgreichen Modellen gering ausgeprägt waren. Die Fremdberichte der aSW korrelierten mit der selbstberichteten aSW vor Behandlungsbeginn (<i>r</i> = 0,47, <i>p</i> = 0,025) und während des aSW-Moduls (<i>r</i> = 0,51, <i>p</i> = 0,014). <b><i>Schlussfolgerung:</i></b> Im aSW-Modul wurden (1) imaginative Bewältigungserfahrungen erzeugt, (2) Intentionen für Verhaltensänderungen gefördert und (3) selbstwirk­sam­keits­relevante Kognitionen aktiviert. Es erscheint geeignet zur kognitiv-motivationalen Vorbereitung von Bewältigungsbestrebungen. Forschungsbedarf besteht hinsichtlich der Effekte des Interventionsmoduls auf reale Bewältigungs­erfahrungen und die Entwicklung der aSW.
DOI: 10.6084/m9.figshare.26124598
title: Supplementary Material for: Perihaematomal oedema evolution over two weeks after spontaneous intracerebral haemorrhage and association with outcome: prospective cohort study

description: Introduction
We know little about the evolution of perihaematomal oedema (PHO) &gt;24 hours after ICH onset. We aimed to determine the trajectory of PHO after ICH onset and its association with outcome.
Methods
We did a prospective cohort study using a pre-specified scanning protocol in adults with first-ever spontaneous ICH and measured absolute PHO volumes on CT head scans at ICH diagnosis and 3±2, 7±2 and 14±2 days after ICH onset. We used the largest ICH if ICHs were multiple. The primary outcomes were (a) the trajectory of PHO after ICH onset and (b) the association between PHO (absolute volume at the time when most repeat CT head scans were obtained, and change in PHO volume at this time compared with the first CT head scan) and poor functional outcome (modified Rankin scale 3-6 at 90 days). We pre-specified multivariable logistic regression models of this association adjusting analyses for potential confounders: age, GCS, infratentorial ICH location and intraventricular extension.
Results
In 106 participants of whom forty nine (46%) were female, with a median ICH volume 7ml (interquartile range [IQR] 2-22ml), the trajectory of median PHO volume was an increase from 14ml (IQR 7-26ml) at diagnosis to 18ml (IQR 8-40ml) at 3±2 days (n=87), 20ml (IQR 8-48ml) at 7±2 days (n=93) and 21ml (IQR 10-54ml) at 14±2 days (n=78) (p=&lt;0.001). PHO volume at each time point was collinear with ICH volume at diagnosis (│r│&gt;0.7) but the change in PHO volume between diagnosis and each time point was not. Given collinearity, we used total lesion (i.e. ICH+PHO) volume instead of PHO volume in a logistic regression model of its association at each time point with outcome. Increasing total lesion (ICH+PHO) volume at day 7±2 was associated with poor functional outcome (adjusted OR per ml 1.02, 95% CI 1.00-1.03; p=0.036) but the increase in PHO volume between diagnosis and day 7±2 was not associated with poor functional outcome (adjusted OR per ml 1.03, 95% CI 0.99-1.07; p=0.132).
Conclusion
PHO volume increases throughout the first two weeks after onset of mild to moderate ICH. Total lesion (ICH+PHO) volume at day 7±2 was associated with poor functional outcome but the change in PHO volume between diagnosis and day 7±2 was not. Prospective cohort studies with larger sample sizes are needed to investigate these associations and their modifiers.
DOI: 10.6084/m9.figshare.26180386
title: Supplementary Material for: Prognostic value of CAF marker expression in the intratumoral and marginal areas of soft tissue sarcoma

description: Introduction: The tumor microenvironment of sarcomas has not been studied in detail; in particular, little is known about cancer-associated fibroblasts (CAFs). Sarcoma cells are difficult to distinguish from CAFs, either histomorphologically or immunohistochemically. 
Methods: We scored expression of individual CAF markers (fibroblast activating protein (FAP), CD10, and podoplanin) in the intratumoral and marginal areas of 133 sarcomas. We also examined the association between these markers, as well as the number of CD163-positive macrophages (i.e., tumor-associated macrophages), and clinical outcome. Results: In all cases, the log-rank test revealed that those with high marker scores and macrophage counts (except for marginal CD10+ CAFs) showed significantly worse disease-free survival (DFS). Grade 2/3 cases with high CAF scores (excluding the marginal FAP and CD10 scores) showed significantly worse DFS, whereas those with high intratumoral FAP/CD10 and marginal podoplanin scores showed significantly worse metastasis-free survival (MFS), and those with a high intratumoral CD10 score showed significantly worse local recurrence-free survival (LFS). Multivariate analysis identified intratumoral CD10/podoplanin scores and marginal FAP/podoplanin scores as independent prognostic factors for DFS, intratumoral FAP/CD10 and marginal FAP/podoplanin/CD163-positive macrophage scores as independent prognostic factors for MFS, and the intratumoral podoplanin score as an independent prognostic factor for LFS. There was a weak-to-moderate correlation between each score and CD163-positive macrophage counts. Conclusion: Patients with high CAF marker expression in the intratumoral and marginal areas have a poorer outcome.
DOI: 10.6084/m9.figshare.26268511
title: Supplementary Material for: Bronchodilator response in Post-COVID-19 patients undergoing pulmonary rehabilitation

description: Introduction: SARS-CoV-2 infections can result in a broad spectrum of symptoms from mild to life-threatening. Long-term consequences on lung function are not well understood yet. Methods: In our study, we have examined 134 post-COVID patients (aged 54.83±14.4 years) with dyspnea on exertion as a leading symptom 6 weeks to 24 months after a SARS-CoV-2 infection for bronchodilator responsiveness during their stay in our pulmonary rehabilitation clinic. Results: Prior to bronchial dilation, six out of 134 patients (4.47%) presented an FEV1/FVC ratio below lower limit of normal (Z-score=-1.645) indicative of an obstructive airway disease. Following inhalation of a ß2-adrenergic agonist we measured a mean FEV1 increase of 181.5 mL in our cohort, which was significantly elevated compared to a historical control group (ΔFEV1 = 118 mL). 28.7% of the patients showed an increase greater than 200 mL and 12% displayed a significant bronchodilation response (&gt;200 mL ΔFEV1 and &gt;12% FEV1 increase). Interestingly, no significant difference in bronchial dilation effect was observed when comparing patients hospitalized and those non-hospitalized during the course of their SARS-CoV-2 infection. Conclusion: Our data provides evidence for increased prevalence of obstructive ventilatory defects and increased bronchodilator responsiveness in patients with persisting symptoms after COVID-19. Depending on the extent of this complication, post-COVID patients may benefit from an adapted ß2-inhalation therapy including subsequent reevaluation.
DOI: 10.6084/m9.figshare.26300482
title: Supplementary Material for: Internet-Based Trauma Recovery Intervention for Nurses: A Randomized Controlled Trial

description: Introduction: Nurses, who care for patients with various traumas, may also experience post-traumatic stress disorder due to indirect or direct exposure to traumatic situations. This study examined the effectiveness of an Internet-based trauma recovery intervention for Korean nurses.
Methods: This randomized controlled trial was conducted with 112 nurses aged 23–40 years who were randomly assigned to the intervention (n = 56) or control group (n = 56) from May 7 to December 20, 2020. Nurses in the intervention group attended eight sessions, and the same intervention was administered to the control group. Repeated measures were collected at pre-test, post-test 1 (immediately after the intervention), and post-test 2 (four weeks after the intervention). A total of 102 nurses (intervention group: n = 49; control group: n = 53) were completed because 10 nurses dropped out before the first session. Data were analyzed using the chi-square test, Fisher’s exact test, t-test, Mann-Whitney U-test, and repeated measures ANOVA (intention-to-treat and per protocol).
Results: There were significant changes in functional health, resilience, post-traumatic stress, depressive symptoms, state anxiety, and trait anxiety over time and in the group-by-time interactions (intention-to-treat and per protocol). There was a significant difference in social support in the group-by-time interactions, but there were no significant changes between the two groups or over time (intention-to-treat and per protocol).
Conclusion: The Internet-based trauma recovery nursing intervention is effective in clinical and community settings for nurses who cannot participate in fixed-schedule programs due to shift work. This study’s findings are relevant for implementing Internet-based trauma recovery programs for nurses and the general population, including survivors and relatives of patients who suffered from COVID-19. This program will also be very useful for people in other high-stress situations. Nurse leaders should consider different populations and situations when offering effective coping strategies suitable for changing environments.
Clinical trial registration number: NCT04989582
DOI: 10.6084/m9.figshare.26324041
title: Supplementary Material for: MicroRNA-223-3p Targeting SGK1 Regulates Apoptosis and Inflammation in Sepsis-Associated Acute Kidney Injury

description: Introduction: Sepsis and septic shock are significant contributors to the development of acute kidney injury (AKI) in critically ill patients. This study aims to elucidate the role and mechanism of microRNA-223-3p in sepsis-associated AKI (SA-AKI).
Methods: Bioinformatics methods were used to analyze the expression of microRNA-223-3p in sepsis patients, its correlation with inflammatory cytokines and to predict the binding site of microRNA-223-3p with SGK1. The binding relationship between microRNA-223-3p and SGK1 was validated using a dual-luciferase reporter gene assay. The expression of microRNA-223-3p was assayed using qPCR in patient serum or lipopolysaccharide (LPS)-treated HK-2 cells. Cell apoptosis, expression of Bax, Bcl-2, cleaved caspase-3, and levels of TNF-α, IL-1β, and IL-6 were measured using TUNEL assay, western blot (WB), and ELISA, respectively. SGK1 expression of HK-2 cells with different treatments was detected using qPCR and WB.
Results: The expression of microRNA-223-3p was found to be upregulated in sepsis patients and HK-2 cells treated with LPS. Furthermore, microRNA-223-3p promoted apoptosis and inflammation in LPS-induced HK-2 cells. This promotion was mediated by the negative regulation of SGK1 by microRNA-223-3p.
Conclusion: The microRNA-223-3p was found to regulate SGK1 and promote apoptosis and inflammation in LPS-induced HK-2 cells. Our study has elucidated the mechanism of microRNA-223-3p in SA-AKI, providing a potential target for sepsis treatment.
DOI: 10.6084/m9.figshare.26345836
title: Supplementary Material for: Obesity is associated with increased 11-oxyandrogen serum concentrations during puberty

description: Introduction: While the influence of various factors on classical androgen synthesis in children and adolescents and its impact on puberty has been widely investigated, there appear to be gaps and contradictory findings regarding the association of overweight and obesity with the synthesis of adrenal-derived 11-oxygenated androgen (11-OA) serum levels. With this study, we aimed to examine how overweight and obesity affect 11-OA serum levels during puberty in a large cohort of children and adolescents.

Methods: Our cohort comprised 1,054 healthy children aged 6 to 19 years providing serum samples at a total of 1,734 visits. Liquid chromatography-tandem mass spectrometry was used to quantify 11-ketotestosterone (11-KT), 11-ketoandrostendione (11-KA4), 11-ß-hydroxytestosterone (11-OHT), 11-ß-hydroxyandrostendione (11-OHA4), testosterone, androstenedione, and DHEAS. In addition, we assessed BMI-SDSs; skinfold thicknesses; and Tanner stages. The significance level α was set to α=0.05.

Results: Increases in 11-KT, 11-KA4, 11-OHT, and 11-OHA4 levels were observed in boys and girls during puberty. 11-KT (ß=0.2, p&lt;0.001), 11-KA4 (ß=0.16, p&lt;0.001) and 11-OHA4 (ß=0.12, p=0.003) were positively correlated with BMI in boys age 13 and under. 11-KT (ß=0.1, p=0.047) was positively correlated with BMI in girls age 11 and under. 11-OHT was positively correlated with BMI independent of age (boys 13 and under: ß=0.17, p&lt;0.001; over 13 years: ß=0.14, p=0.001; girls 11 and under: ß=0.17, p&lt;0.001; over 11 years: ß=0.18, p&lt;0.001).

Conclusion: We found increasing 11-OA serum levels throughout all Tanner stages. 11-OAs were observed to be associated with BMI and skinfold thickness, suggesting that overweight and obesity may be associated with pubertal alterations in 11-OA serum levels.
DOI: 10.15139/s3/bszepp
title: Berkeley Couples Study, 2008

description: 80 romantic couples (N = 160) from the San Francisco Bay Area (including UC Berkeley students) enrolled in a study with: (1) baseline survey measures, (2) lab interactions (sacrifice, suffering, and love), (3) a 14-day daily experience study and (4) a three-month longitudinal follow-up survey. To be eligible, they must have been at least 18 years old and in a romantic relationship for a minimum of 6 months. On average, participants were in their mid 20s (range 18-60), had been involved in their romantic relationship for a medium length of 15 months, 53% were European or European American, and 75 out of the 80s couples were heterosexual. Participants independently completed a 45-minute online questionnaire in the days prior to their first lab session. The couple attended the lab session together. There, the participants participated in a series of structured videorecorded conversations, and privately answered brief questionnaires after each conversation. Topics were: - A major sacrifice they had made for their partner over the course of their relationship (sacrifice conversation). - A disclosure of a time of personal suffering (suffering conversation). - A time when they had experience a great deal of love for their partner (love conversation) For the subsequent two weeks (14 nights), couple-members independently completed a brief nightly questionnaire about their day (including personal well-being and interactions with the partner, with many questions about daily sacrifices). Three months after the completion of the diary part of the study, both partners separately completed a longitudinal follow-up survey with questions about their relationships. Participants in this study also provided saliva samples that were used for genotyping. This study was approved by the University of California, Berkeley Institutional Review Board (ethics number not known)
DOI: 10.24432/c5k89b
title: Vertebral Column
DOI: 10.34740/kaggle/ds/1238004
title: BdSL-D1500