cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7ro66f
title: Occurrence Download

description: A dataset containing 18246091 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Norway"
 ]
}

 The dataset includes 18246091 records from 979 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000487-150204170955391/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m37557
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "GadmGid is COL.15.82_2",
 "OccurrenceStatus is Present",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 52 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192727-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5yxa98
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "GadmGid is COL.15.82_2",
 "TaxonKey is Squamata"
 ]
}

 The dataset includes 46 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192724-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngsbdn
title: Occurrence Download

description: A dataset containing 1863 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xanthomonas axonopodis"
 ]
}

 The dataset includes 1863 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000487-150211104439307/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ys696
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Encyclia ossenbachiana Pupulin"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192723-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkfwwq
title: Occurrence Download

description: A dataset containing 319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Country is Burkina Faso",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 319 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000487-150221044754056/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gtvcf2
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Encyclia oxypetala (Lindl.) Schltr."
 ]
}

 The dataset includes 22 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192725-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.19ji9r
title: Occurrence Download

description: A dataset containing 23410 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Poa alpina L.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23410 records from 137 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000487-150311145101897/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pnpu95
title: Occurrence Download

description: A dataset containing 2716 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Euphorbia tirucalli L."
 ]
}

 The dataset includes 2716 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192733-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive110074.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive110075.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0101773.10fu
title: SH0101773.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive110075.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive110076.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0101774.10fu
title: SH0101774.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive110076.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0101775.10fu
title: SH0101775.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.3amzmr
title: Occurrence Download

description: A dataset containing 128738 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lycaena phlaeas",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 5000",
 "Year is greater than or equal to 1970",
 "Country is one of (Italy, Switzerland, Germany, Austria, Slovenia, France)"
 ]
}

 The dataset includes 128738 records from 1640 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077652-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3611303_d1
title: Additional file 1: of Dig1 protects against locomotor and biochemical dysfunctions provoked by Roundup

description: Raw data for locomotor activity and biochemical parameters of rats treated with Roundup (R), Dig1 (D), Dig1+Roundup (D+R) in comaprison to controls (C). Excel sheet1: front activity (in counts); 2: rear activity (in counts); 3: sum "front+rear" (in counts); 4: shuttles back and forth (in counts); 5: horizontal activity (sum "front+rear+shuttles back and forth", in counts); 6: vertical activity or rearing behavior (in counts); 7: total locomotor activity (sum "horizontal+vertical" activities); 8: CYP2D6 activity in liver S9 fraction (difference between T1h and T0 of the ratio "area of the analyte/area of the internal standard" x 100); 9: GGT activity (U/mg protein) in liver S9 fraction; 10: sodium plasmatic level (mmol/L); 11: potassium plasmatic level (mmol/L); 12: inorganic phosphate plasmatic level (mg/L); 13: estradiol plasmatic level (pg/mL). (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3611315_d1
title: Additional file 2: of Delineation of the population genetic structure of Culicoides imicola in East and South Africa

description: A table of estimates of genetic diversity of the microsatellite markers per population. The table describes the genetic diversity of the markers. Significant Hardy-Weinberg equilibrium (P
DOI: 10.6084/m9.figshare.c.3611315_d2
title: Additional file 1: of Delineation of the population genetic structure of Culicoides imicola in East and South Africa

description: A summary of the C. imicola markers designed to the flanking regions of the microsatellite repeats with the type of repeats. The table provides a list of a total of 169 primer pairs predicted to anneal to a unique single pair read. The motif type that the primer represents is also indicated (XLS 41 kb)
DOI: 10.6084/m9.figshare.c.3611321_d1
title: Additional file 1: of Transcriptome profiling in the damselfly Ischnura elegans identifies genes with sex-biased expression

description: Sheet 1. RNA sequence data trimming statistic. Sheet 2: Summary of initial and final de novo assembly. Sheet 3: 20 most abundant protein domain. Sheet 4–7: List of all transcripts with results from the differential expression analysis between all females and males (sheet 4), androchrome females and males (sheet 5), infuscans females and males (sheet 6), and infuscans-obsoleta females and males (sheet 7). Sheet 8–11: List of the most differentially expressed transcripts (DETs) between all females and males (sheet 8), androchrome females and males (sheet 9), infuscans females and males (sheet 10), and infuscans-obsoleta females and males (sheet 11). Sheet 12: List of enriched GO terms in DETs (based on the DETs listed in sheet 8–11). Sheet 13: Kegg pathways identified in DETs (based on the DETs listed in sheet 8). Sheet 14: List of different types of TRPs identified in the assembled transcriptome. Sheet 15: List of olfactory genes identified in the assembled transcriptome. Sheet 16: Genes/enzymes of carotenoid pigmentation pathway. Sheet 17: Genes/enzymes involved in juvenile and ecdysone pathway. Sheet 18: Gene involved in innate immune pathways. Sheet 19: Gene involved in sex-determining pathway. (XLSX 16726 kb)
DOI: 10.5281/zenodo.14449271
title: Predictions for every (species, chemical, duration) triplet on unfiltered ADORE data
DOI: 10.5281/zenodo.14449272
title: Predictions for every (species, chemical, duration) triplet on unfiltered ADORE data
DOI: 10.6084/m9.figshare.c.3611759_d1
title: Additional file 10: Table S6. of Genetic analysis of variation in lifespan using a multiparental advanced intercross Drosophila mapping population

description: Differentially expressed genes in heads. Table includes all genes surviving a genomewide FDR threshold of 5 %. Refer to the legend for Additional file 9: Table S5 for details of the columns. (TXT 197 kb)
DOI: 10.6084/m9.figshare.c.3611780_d5
title: Additional file 10: Table S5. of The estrous cycle surpasses sex differences in regulating the transcriptome in the rat medial prefrontal cortex and reveals an underlying role of early growth response 1

description: Report of the full results of the functional annotation clustering analysis performed on each gene expression clusters described in Fig.Â 4. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3611759_d7
title: Additional file 4: Table S2. of Genetic analysis of variation in lifespan using a multiparental advanced intercross Drosophila mapping population

description: LOD scores for a genomewide scan for lifespan QTL in the DSPR. The “Chr” column indicates the chromosome arm tested (X, 2L, 2R, 3L, 3R), and the “PhysicalPosition” and “GeneticPosition” columns give information on the chromosomal position tested. Physical positions are provided as both Release 5 (“_R5”) and Release 6 (“_R6”) of the Drosophila melanogaster reference genome. R6 coordinates were generated from the R5 coordinates output by the DSPRqtl mapping software using the FlyBase coordinates converter tool. The “LODscore” column provides evidence for the presence of a QTL at each position along the genome. (TXT 560 kb)
DOI: 10.6084/m9.figshare.c.3611780_d6
title: Additional file 15: Table S8. of The estrous cycle surpasses sex differences in regulating the transcriptome in the rat medial prefrontal cortex and reveals an underlying role of early growth response 1

description: Description of the reported interaction of estrogens or progestins on synapse-related genes differentially expressed throughout the estrous cycle in our study. (XLSX 35 kb)
DOI: 10.6084/m9.figshare.c.3611759_d8
title: Additional file 5: Table S3. of Genetic analysis of variation in lifespan using a multiparental advanced intercross Drosophila mapping population

description: Protein-coding genes residing within mapped QTL intervals. The “QTL” column refers to the mapped QTL, “Cytological” and “Position_R6” provide the position of the gene in release 6 of the D. melanogaster reference, and “GeneSymbol” and “FBgn” provides details of the gene name. (TXT 20 kb)
DOI: 10.6084/m9.figshare.c.3612293_d2
title: Additional file 1: of Transcriptome analysis of smooth cordgrass (Spartina alterniflora Loisel), a monocot halophyte, reveals candidate genes involved in its adaptation to salinity

description: The comparative analysis among Spartina alterniflora reads with reads of Salterniflora [34] and unigenes of S. pectinata [78]. (XLSX 154Â kb)
DOI: 10.6084/m9.figshare.c.3612293_d3
title: Additional file 4: Table S2. of Transcriptome analysis of smooth cordgrass (Spartina alterniflora Loisel), a monocot halophyte, reveals candidate genes involved in its adaptation to salinity

description: Simple sequence repeats (SSRs), flanking primers and their predicted location in Spartina alterniflora unigenes. (XLSX 357Â kb)
DOI: 10.15468/dl.vke6vk
title: Occurrence Download

description: A dataset containing 11363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Bombus pauloensis Friese, 1912, Bombus atratus Franklin, 1913, Bombus cayennensis albidoanalis Friese, 1931, Bombus cayennensis buchwaldi Friese, 1931, Bombus cayennensis draenerti Friese, 1931, Bombus cayennensis jundiahyensis Friese, 1931, Bombus cayennensis paufer Friese, 1931, Bombus cayennensis uberabensis Friese, 1931, Bombus thoracicus umbricollis Friese, 1931, Bremus atratus alternans Frison, 1925, Bremus atratus annulatus Frison, 1925, Bremus niger signatus Frison, 1925, Bombus cayennensis nigriventris Friese, 1912, Bombus cayennensis pauloensis Friese, 1912)"
 ]
}

 The dataset includes 11363 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033502-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3612293_d4
title: Additional file 3: Table S1. of Transcriptome analysis of smooth cordgrass (Spartina alterniflora Loisel), a monocot halophyte, reveals candidate genes involved in its adaptation to salinity

description: Protein families found in Spartina alterniflora unigenes retrieved from Pfam database. (XLSX 229Â kb)
DOI: 10.6084/m9.figshare.c.3612305_d1
title: Additional file 3: of Dietary nitrogen alters codon bias and genome composition in parasitic microorganisms

description: Sheet 1: Accession numbers and corresponding orthogroups for all kinetoplastid species used in this analysis. Sheet 2: Accession numbers for the genes required for arginine and amino sugar metabolism in the Mollicutes. Sheet 3: The model was run on the dataset of orthologous genes (as described in the “Inference of orthogroups and construction of multiple sequence alignments” section in the “Methods”) and it was also run separately on all complete coding sequences. A complete coding sequence was considered as any coding sequence with start and stop codons whose length was divisible by 3 and longer than 30 nucleotides. This sheet shows the parameters obtained for each of the LN, MN and HN groups for both the Mollicutes and kinetoplastid parasites. Highlighted in yellow are the parameters obtained for the original two-parameter model that only considers selection acting on nitrogen content in coding sequences and mutation bias. Highlighted in green are the values obtained for the three-parameter model, which also considers selection acting on translational efficiency (tAI). The model parameters that produce the highest log likelihood values and the lowest AIC values are the best fit to the observed data. Sheet 4: Genome locations, nitrogen use and aligned sequences for Mollicutes 5S, 16S and 23S rRNA. Total nitrogen used in rRNA per 70S ribosome is given in the top left corner. Sheet 5: Genome locations, nitrogen use and aligned sequences for kinetoplastid 5.8S, 18S, 23S alpha and 23S beta rRNA. Total nitrogen used in rRNA per 80S ribosome is given in the top left corner. Sheet 6: Accession numbers for the genes required for arginine and amino sugar metabolism in the Mollicutes. (XLSX 639 kb)
DOI: 10.6084/m9.figshare.c.3612329_d3
title: Additional file 4: of Co-occurrence of resistance genes to antibiotics, biocides and metals reveals novel insights into their co-selection potential

description: R code for statistical analysis. (TXT 4Â kb)
DOI: 10.15468/dl.2n5mgz
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Aedes africanus (Theobald, 1901)"
 ]
}

 The dataset includes 169 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033504-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wm97y3
title: Occurrence Download

description: A dataset containing 1998 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Ipomoea batatas (L.) Lam."
 ]
}

 The dataset includes 1998 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033503-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3612815_d1
title: Additional file 7: Table S6. of Genome-wide characterization of human L1 antisense promoter-driven transcripts

description: (excel) Overlap between detected putative L1 ASP transcripts from Table S1 and genes identified to play a causal role in cancer (COSMIC database). (XLSX 18 kb)
DOI: 10.6084/m9.figshare.c.3612815_d2
title: Additional file 9: Table S8. of Genome-wide characterization of human L1 antisense promoter-driven transcripts

description: (excel) Summary of mouse ESTs (mm10) supporting putative L1 ASP transcripts. Filtering eliminated many putative ESTs because unlike human ESTs much fewer mouse ESTs are labelled with transcript direction information within the intronOrientation field. The 307 ESTs represented in the table sometimes overlap more than one gene and may be represented more than once. (XLSX 36 kb)
DOI: 10.6084/m9.figshare.c.3612815_d3
title: Additional file 4: Table S3. of Genome-wide characterization of human L1 antisense promoter-driven transcripts

description: (excel) Peptide identification for ESTs in Table S1 using Transdecoder. Putative predicted peptides were characterized for the presence of a stop codon and the ORF0 open reading frame. (XLSX 197 kb)
DOI: 10.6084/m9.figshare.c.3612815_d4
title: Additional file 1: Table S1. of Genome-wide characterization of human L1 antisense promoter-driven transcripts

description: (excel) Summary of genomic screen result identifying ESTs supporting putative L1 antisense promoter (ASP) transcripts in the human genome (hg19). The 2015 ESTs are sometimes represented more than once in Table S1 because a single EST can overlap multiple cognate genes. (XLSX 276 kb)
DOI: 10.6084/m9.figshare.c.3612815_d5
title: Additional file 8: Table S7. of Genome-wide characterization of human L1 antisense promoter-driven transcripts

description: (excel) Summary of ESTs supporting putative L1 ASP transcript where an independent EST supported L1 exonization. These L1 ASP transcripts are considered to be potentially explained by L1 exonization and are of lower confidence. (XLSX 187 kb)
DOI: 10.6084/m9.figshare.c.3612815_d10
title: Additional file 6: Table S5. of Genome-wide characterization of human L1 antisense promoter-driven transcripts

description: (excel) Validated Sanger sequences of L1 ASP transcripts L1-KIAA1324L and L1-UVRAG. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3612839_d4
title: Additional file 6: of Validity assessment of the symptom checklist SCL-90-R and shortened versions for the general population in Ukraine

description: Confirmatory factor analysis of the SCL-K-9 in the Ukrainian general population: factor loadings. Results of confirmatory factor analysis. Factor loadings for the SCL-K-9 in 1997, 1999 and 2014 studies that are representative of the Ukrainian population. (XLSX 8Â kb)