cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28674785.v1
title: Supplementary Material for: Younger and older adults' aging well construals: A quantitative word use and topics comparison

description: Introduction: Individuals’ construals of aging capture how they think of aging, and what aging well means to them. Assessing such construals is important for understanding attitudes towards aging and, ultimately, how to tailor personalized aging well interventions to an individual.
Methods: We analyzed 100 younger adults and 92 older adults’ spoken narratives of what aging well means to them using two language analysis approaches, closed vocabulary, word-count analysis via Linguistic Inquiry and Word Count (LIWC) and open vocabulary, word-co-occurrence analysis via topic modelling. 
Results: Younger and older adults’ spoken narratives differed in both word and topic use. Younger adults used more words related to physical aspects, more tentative language, and expressed themselves via higher status language (clout), while older adults used authentic language, i-talk, and words related to work, home, family, and religion. Topic modelling complemented the LIWC analyses and showed that younger adults primarily discussed topics of bodily and cognitive decline, and strategies of preventing aging, conveying concerns about, and negative stereotypes of aging. Older adults topicalized family reflections, openness to new experiences, and their social engagement, signaling a more positive outlook on (continued) aging.
Conclusion: Our complimentary word-count and word-co-occurrence language analyses of aging well construals revealed stark differences between younger and older adults’ perceptions of aging well, that raise important questions about intergenerational exchanges and communications about aging more broadly. Further, we found that aging construals of older adults are useful for estimating their future outlook, an important aspect of resilience against cognitive decline and possible entry point for targeted precision aging interventions.
DOI: 10.6084/m9.figshare.3436496.v2
title: molecule interference transistor

description: <b>Interference-based molecular transistors</b><b>Ying Li, Jan A. Mol, Simon C. Benjamin, and G. Andrew D. Briggs</b> <br>
DOI: 10.6084/m9.figshare.20683870.v1
title: larus_argentatus_decontaminated_FSCR.fasta.gz

description: ........
DOI: 10.6084/m9.figshare.25880092.v1
title: Sc_Integrated_normalized_QC_matrix

description: Integrative of scRNA-seq datasets
DOI: 10.6084/m9.figshare.27641181.v1
title: DATASET

description: DATASET
DOI: 10.6084/m9.figshare.3490229.v1
title: Final_Haps.gen

description: Final filtered RAD locus haplotypes used for analysis in Puritz, J.B., Gold, J.R., and Portnoy, D.S. Fine-scale partitioning of genomic variation among recruits in an exploited fishery: causes and consequences.
DOI: 10.6084/m9.figshare.5923777.v1
title: 'More Than a Feeling': An Empirical Investigation of Hedonistic Accounts of Animal Welfare

description: raw data<br>
DOI: 10.6084/m9.figshare.6506672.v1
title: Supplementary Material for: Impact of Suicidal Ideation on Long-Term Cardiac Outcomes in Patients with Acute Coronary Syndrome: Sex-Specific Differences

description: Medicine
DOI: 10.6084/m9.figshare.28788896.v1
title: 缓解中国的资本与劳动 通过环境信用评估

description: 本研究以中国企业环境信用评价系统 （EECES） 为准自然实验，考察了企业环境信用对资本劳动冲突的影响。
DOI: 10.6084/m9.figshare.12431864.v1
title: Cerasus serrulata genome gff

description: it contains 29,094 genes<br>
DOI: 10.6084/m9.figshare.7306769.v1
title: Supplementary Material for: Lesions Mimicking Melanoma at Dermoscopy Confirmed Basal Cell Carcinoma: Evaluation with Reflectance Confocal Microscopy

description: <b><i>Background:</i></b> Atypical basal cell carcinoma (BCC), characterized by equivocal dermoscopic features typical of malignant melanoma (MM), can be difficult to diagnose. Reflectance confocal microscopy (RCM) enables in vivo<i></i> imaging at nearly histological resolution. <b><i>Objectives:</i></b> To evaluate with RCM atypical melanocytic lesions identified in dermoscopy, according to common RCM criteria for the differential diagnosis of BCC, and to identify representative RCM parameters for superficial (sBCCs) and nonsuperficial (nsBCCs) basal cell carcinomas (BCCs). <b><i>Methods:</i></b><i></i> A retrospective analysis of consecutive patients evaluated with RCM, selecting excised lesions classified at dermoscopy with ≥1 score from the re visited 7-point checklist, mimicking melanoma, registered between 2010 and 2016. Cluster analysis identified BCC subclassifications. <b><i>Results:</i></b> Of 178 atypical lesions, 34 lesions were diagnosed as BCCs with RCM. Lesions were confirmed BCCs with histopathology. Dermoscopic features included atypical network (55.9%) and regression structures (35.5%) associated with sBCCs, and an atypical vascular pattern (58.8%) and irregular blotches (58.8%) with nsBCCs. Hierarchical cluster analysis identified 2 clusters: cluster 1 (100% sBCCs) was characterized by the presence of cords connected to the epidermis (90%, p &lt; 0.001), tumor islands located in the epidermis (100%, <i>p</i> &lt; 0.001), smaller vascular diameter (100%, <i>p</i> &lt; 0.001) and solar elastosis (90%, <i>p</i> = 0.017), and cluster 2 (nsBCCs 85%) was defined by the dermic location of tumor islands (87.5%, <i>p</i> &lt; 0.001) with branch-like structures (70.8%, <i>p</i> = 0.007) and surrounding collagen (83.3%, <i>p</i> = 0.012), peripheral palisading (83.3%, <i>p</i> = 0.012) and coiled vascular morphology (79.2%, <i>p</i> &lt; 0.001) with a larger vascular diameter (50%, <i>p</i> &lt; 0.001). <b><i>Conclusions:</i></b> RCM is able to diagnose BCCs mimicking melanoma at dermoscopy and seems able to identify sBCCs and nsBCCs.
DOI: 10.6084/m9.figshare.28326821.v1
title: fish_TPDcalcs.csv

description: fish_TPDcalcs.csv is the output of the TPD (trait probability distribution) metric calculations for the manuscript "Abiotic variables drive different aspects of fish community trait variation and species richness across the continental United States" in Journal of Animal Ecology (2025)
DOI: 10.6084/m9.figshare.25097516.v1
title: <b>The Impact of Duolingo on Language Learning in a Triangulation Method</b>

description: Qualitative and Quantative Results of the <b>The Impact of Duolingo on Language Learning in a Triangulation Method</b><b>.</b>
DOI: 10.6084/m9.figshare.21908607.v1
title: Supplementary Material for: Impact of Weight Gain on the Subsequent Survival of New Peritoneal Dialysis Patients

description: Introduction: Obesity at the initiation of dialysis was reported to adversely affect the clinical outcome of peritoneal dialysis (PD) patients, and weight gain is common after started on PD. However, there are few studies on the prognostic implications of weight gain after PD. Methods: We reviewed the change in body weight of 954 consecutive patients during the first 2 years of PD in a single Hong Kong center. Their subsequent clinical outcomes, including patient and technique survival rates, hospitalization, and peritonitis rates, were analyzed. Results: The mean age was 60.3 ± 12.2 years; 535 patients (56.1%) were men, and 504 (52.8%) had diabetes. From 1995-1999 to 2015-2019, the percentage of body weight gain during the first 2 years of PD was 1.0 ± 7.9%, 1.6 ± 7.1%, 1.6 ± 7.2%, 3.9 ± 9.5%, to 4.0 ± 10.3% for each 5-year period, respectively (p for linearity &lt;0.0001). The subsequent 5-year patient survival rates were 29.9%, 43.3%, 40.5%, 43.6%, and 43.3% for patients with weight loss &gt;5%, weight loss 2-5%, weight change with 2%, weight gain 2-5%, and weight gain &gt;5% during the first 2 years on PD, respectively (log-rank test, p = 0.035). With multi-variable Cox regression model to adjust for clinical confounders, weight loss &gt;5% during the first 2 years of PD was associated with a worse patient survival rate subsequently (adjusted hazard ratio 4.118, 95% confidence interval 1.040-16.313, p = 0.044), while weight gain was not associated with the subsequent patient survival. Weight change during the first 2 years of PD does not appear to affect subsequent technique survival, hospitalization, decline in residual renal function, or peritonitis rate. Discussion and Conclusions: Weight gain is common during the first two years of PD, but weight gain does not appear to have any significant impact on the subsequent outcome. In contrast, weight loss &gt;5% was significantly associated a worse patient survival subsequently.
DOI: 10.6084/m9.figshare.28281632.v1
title: <b>Development of web-based resource usage patterns among English-to-Chinese trainee translators</b>

description: This article examines changes in trainee translators’ web-based resource use patterns during a four-month English-to-Chinese translation practice course. An analytical framework was employed that accommodated the statistical exploration of resource use development, including new and emerging resources. The research design incorporated four repeated measures with a cohort of 19 participants: data were collected via the simultaneous use of a key logger and a screen recorder in a remote setting. A quality assessment was conducted to investigate the correlation between resource use and the overall quality of the final translation products. Findings indicate a shift in resource preference from dictionaries to knowledge-based resources, with trainee translators focusing on larger contextual issues rather than lexical problems. The quality assessment revealed a slight negative correlation between the translation error scores and the percentage of time allocated to knowledge-based resources. These findings highlight the importance of understanding trainee translators’ shifting resource use and evaluating their resource competence. The implications of the findings for translator training are discussed, and the need to adapt training programs to meet changing resource landscapes emphasized.
DOI: 10.6084/m9.figshare.28229435.v1
title: Sequence chromatogram of the c.1834G&gt;T mutation on the <i>COL4A5</i> gene in the proband and her family members

description: In family 1, the detected variant in the <i>COL4A5</i> gene (c.1834G&gt;T) of the proband inherited from her mother.
DOI: 10.6084/m9.figshare.22434994.v1
title: GD-GNNWR

description: Codes and simulated dataset* for GD-GNNWR. *The simulated dataset can be used to show how the codes work.
DOI: 10.6084/m9.figshare.25603002.v2
title: <b>Yersiniabactin produced by</b><b><i> </i></b><b><i>Escherichia coli</i></b><b><i> </i></b><b>promotes intestinal inflammation by inducing lipid peroxidation and ferroptosis</b>

description: Escherichia coli (E. coli), a major foodborne pathogen, is a significant threat to public health, causing food poisoning and animal diseases. Therefore, it is imperative to further investigate the impacts of E. coli on gut health. Yersiniabactin (Ybt), a siderophore produced by E. coli, depletes iron from host cells, leading to cellular damage and death. However, the precise mechanisms underlying its pathogenicity remain unclear. This study explores how E. coli-Ybt contributes to intestinal inflammation by inducing ferroptosis.Our findings show that E. coli-Ybt intensifies oxidative stress, lipid peroxidation, inflammation, iron accumulation, and cell death, culminating in intestinal injury. Mechanistically, Ybt-mediated ferroptosis is linked to the suppression of the Keap1/Nrf2 pathway, which amplifies reactive oxygen species (ROS), and the activation of the TNF/NF-κB pathway, driving inflammation. ROS-induced oxidation of polyunsaturated fatty acids (PUFAs) promotes lipid peroxidation and the production of 6-trans-leukotriene B4 (6-transLTB4) via the arachidonic acid pathway, further triggering ferroptosis. Exogenous 6-transLTB4 exacerbates this inflammatory cascade. Additionally, Ybt disrupts iron efflux, leading to excessive intracellular iron accumulation.Ybt significantly aggravates intestinal inflammation by inducing ferroptosis in intestinal epithelial cells, enhancing the pathogenicity of E. coli. This underscores the potential threat of E. coli to intestinal health, emphasizing the significance of Ybt-induced ferroptosis.
DOI: 10.6084/m9.figshare.27044410.v1
title: Used contracts

description: Contracts used in the thesis work “Quantifying the Impact of Smart Contract Vulnerabilities in Solidity”
DOI: 10.6084/m9.figshare.5661718.v1
title: Comics created in Graphic Lives project

description: Life story comic created by women from Hyde Community Action as part of the Graphic Lives project.
DOI: 10.6084/m9.figshare.26271265.v4
title: Source data for figures

description: This is oscillation signal directly detected by the MRI scanner. It should be downloaded together with Matlab codes from https://github.com/qianchq1/2-in-1-EEG-fMRI-detection and stored in the same directory as those Matlab codes.
DOI: 10.6084/m9.figshare.6071741.v1
title: Concept mapping study: Potential predictive factors for successful referral from specialist mental-health services to less intensive treatment

description: Data from a concept mapping study in potential predictive factors for successful referral from specialist mental-health services to less intensive treatment. <br>The data has been generated and analysed with proprietary software (global max by concept systems), so it might not be easy to analyse without this software.
DOI: 10.60893/figshare.jcp.28454816.v1
title: Supplementary Material

description: Supplementary Material for publication
DOI: 10.6084/m9.figshare.24249160.v1
title: Supplementary Material for: Endotoxin-induced physiological and psychological sickness responses in healthy humans: insights into the post-acute phase

description: Introduction: Experimental endotoxemia is a translational model of systemic inflammation that has contributed significantly to our current understanding of sickness behavior and inflammation-associated depression. Previous studies using this model revealed a strong association between cytokine levels, endocrine changes, and psychological sickness symptoms during the acute phase of inflammation. The objective of this randomized, double-blind, placebo-controlled crossover study was to gain insight into potential post-acute physiological and psychological consequences of endotoxin administration that may either persist or newly emerge between 24 to 72 h after injection. The main focus was on associations between serum levels of C-reactive protein (CRP) and affective symptoms as well as alterations in diurnal cortisol profile, two key features of inflammation-associated depression. Methods: Healthy male volunteers (N=18) received an injection of either endotoxin (0.8 ng/kg) or placebo on two separate but otherwise identical study days, 7 days apart. Blood and saliva samples were collected during acute and post-acute phases after injection to measure blood inflammatory markers (interleukin [IL]-6, IL-1 receptor antagonist [ra], CRP) and salivary cortisol levels. In addition, participants completed a comprehensive battery of questionnaires to assess physical and psychological sickness symptoms. Results: Endotoxin treatment induced a short-time rise in plasma IL-6 and a longer increase in IL-1ra. The increase in serum CRP was delayed compared to cytokines, peaking at 24 h and gradually decreasing until 72 h after injection. The inflammatory response was accompanied by bodily and psychological sickness symptoms which occurred only in the acute phase, whereas none of the symptoms persisted or recurred in the post-acute phase. Salivary cortisol levels were significantly increased during acute phase and exhibited pronounced circadian changes. However, no significant differences in diurnal cortisol profiles were observed between placebo and endotoxin conditions on the days after treatment. Conclusion: Our findings suggest that CRP, which is elevated in patients with inflammation-associated depression, does not appear to be responsible for depressive symptomatology. Moreover, a single inflammatory episode is not sufficient to alter diurnal cortisol profiles, as observed in inflammation-associated depression. In addition, the absence of persistent LPS-induced psychological and physiological changes beyond the acute phase further supports the safety of endotoxin administration in humans.
DOI: 10.6084/m9.figshare.12116715.v1
title: Geith 2020 - ExpData

description: <b>Experimental and Mathematical Characterization of Coronary Polyamide 12 Balloon Catheter Membranes</b><br><br>The experimental quantification and modeling of the multiaxial mechanical response of polymer membranes of coronary balloon catheters have not yet been carried out.Due to the lack of knowledge of such a study, it is not known whether isotropic material models can describe the material response of balloon catheter membranes expanded with the nominal or an even higher pressure. Therefore, for the first time, specimens of commercial polyamide 12 balloon catheters membranes were observed by performing uniaxial and biaxial extension tests. The quasi-static and dynamic testing scenarios include rupture, relaxation, and equibixial testing procedures. Novel clamping techniques are described, which allow even to test tiny specimens taken from the balloon membranes. The results of this study reveal the semi-compliant, nonlinear, and viscoelastic character of polyamide 12 balloon catheter membranes.Above nominal pressure, the membranes show a pronounced anisotropic mechanical behavior with a stiffer response in the circumferential direction.The anisotropic feature intensifies with an increasing strain-rate. A modified polynomial model was applied to represent the realistic mechanical response of the balloon catheter membranes during dynamic biaxial extension tests.This study also includes a compact set of constitutive model parameters for the use of the proposed model in future finite element analyses to perform more accurate simulations of expanding balloon catheters.<br>See the attached readme file for a description of the data.<br>
DOI: 10.6084/m9.figshare.28319774.v1
title: Data and code for trial variability analysis - CTmax methods paper

description: Data (two data files) and R code (R Markdown file) for the trial variability analysis presented in the Raby et al. manuscript titled, "Measuring critical thermal maximum in aquatic ectotherms: a practical guide."Please see the readme file for details on variables in the two data files.
DOI: 10.6084/m9.figshare.28790114.v1
title: Pollution and childhood pneumonia in Lima - Supplementary material - Data

description: These data include the aggregated childhood pneumonia cases by district, which were obtained from the epidemiological surveillance system of the Ministry of Health (MINSA), which integrates information from all health centers in each district. Additionally, the data include the weekly PM₂.₅ concentrations that were retrieved from open data provided by the National Service of Meteorology and Hydrology of Peru (SENAMHI), which conducts environmental monitoring through sentinel stations located in each district included in the study. Exposure was operationalized using the weekly median PM₂.₅ concentration expressed in µg/m³.
DOI: 10.6084/m9.figshare.27824469.v1
title: Supplementary Material for: Association between serum albumin to creatinine ratio and readmission in elderly heart failure patients: A Retrospective Cohort Study

description: Introduction: This study aimed to investigate the relationship between the serum albumin to serum creatinine ratio (sACR) and readmission in elderly heart failure patients. 
Methods: We conducted a retrospective cohort study using data from the PhysioNet Restricted Health Data database. The exposure variable was sACR and the outcome variable readmission. Multivariate logistic regression and subgroup analyses were performed to assess the independent association between sACR and readmission. Smooth curve fits were applied to examine the non-linear relationship. We employed multiple imputation and E-value sensitivity analyses to assess the robustness of our results.
Results: Our study included 1,725 participants, of whom 40.6% were male, 59.2% were aged 60-79 years, and 40.8% were aged 80 years and older. After adjusting for potential confounders, we found that for each unit increase in sACR, the 28-day readmission rate decreased by 48% (OR = 0.52, 95% CI: 0.29-0.95, P = 0.003). The 28-day readmission rate was significantly higher in the low sACR group (sACR&lt;0.32) than in the high sACR group (sACR&gt;0.51) (OR = 0.47, 95% CI: 0.3-0.76, P=0.002). Similar results were observed for 3-month and 9-month readmission. Subgroup analysis showed no significant interactions. A nonlinear relationship was observed between the sACR and readmission. Sensitivity analyses have confirmed the robustness of our results.
Conclusion: There is a negative association between sACR and readmission in Chinese heart failure patients. Our study may offer novel insights into the management of heart failure readmissions.
DOI: 10.6084/m9.figshare.12589019.v1
title: Supplementary Material for: Atypically High Reproductive Skew in a Small Wild Chimpanzee Community in a Human-Dominated Landscape

description: Social rank is positively correlated with reproductive success in numerous species, albeit demographic factors often influence those patterns. In multimale primate species, reproductive skew tends to decrease with increasing numbers of males and sexually receptive females. Alpha male chimpanzees (<i>Pan troglodytes</i>) often sire a disproportionate, though somewhat variable, percentage of offspring compared to other males. In a small community of eastern chimpanzees inhabiting a human-dominated landscape in Bulindi, Uganda, we found extraordinarily high levels of alpha male reproductive success over a 5-year period (7/8 offspring = 88%), despite the presence of multiple subordinate males. The skew exceeds that reported in other studies of chimpanzees as well as closely related bonobos (<i>Pan paniscus</i>). Our findings underscore the role of demographic and social factors in male reproductive success and also suggest that conclusions about species differences may be premature. The interaction of small community size, dispersal limitations, and male reproductive strategies like those found here may decrease genetic diversity and increase the risk of concomitant inbreeding in chimpanzee communities under strong anthropogenic pressure.
DOI: 10.6084/m9.figshare.16945657.v1
title: Raw data for Fig. 2

description: Raw data for Fig. 2
DOI: 10.6084/m9.figshare.21035857.v1
title: MOSAIC trait database

description: Database files for the MOSAIC database (See associated manuscript: MOSAIC: A Unified Trait Database to Complement Structured Population Models for more information and guidance). <br> See, also, user guide and further information on the MOSAIC portal: https://mosaicdatabase.web.ox.ac.uk/ <br> The primary key for linking databases is the species name. <br> File #1 - Primary trait database file, organised by species name (csv). Filte #2 - ERA-5 climate data for all population models in COMADRE, COMPADRE, and PADRIN (csv). Organised by population model ID. File #3 - OTL phylogeny for species in the COMADRE and COMPADRE databases. Note that these data files are intended for loading and use in R using the ape package. (txt) <br>
DOI: 10.6084/m9.figshare.28755017.v1
title: U-Net GIS Data

description: The GIS database used in this project serves as a centralized repository for all spatial datasets required for wildfire threat analysis and model training. It includes CAL FIRE’s Wildland Fire Threat layer, which provides pixel-based classifications of wildfire potential across California, as well as transportation infrastructure layers, including primary and secondary roads and railways.<br>To support impact analysis, 1,000-foot buffer zones were generated around each infrastructure feature to define zones of interest for wildfire segmentation. The database is structured for integration into both machine learning workflows and GIS environments, enabling seamless overlay, visualization, and spatial querying within platforms such as ArcGIS Pro or QGIS.