cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23708/0nfzq7
title: Replication data for: Antimicrobial resistance of Enterobacterales in Central Africa: a systematic review and meta-analysis

description: Background: Antimicrobial resistance (AMR) in Enterobacterales is a growing concern in sub-Saharan Africa, yet data remain scarce for Central Africa. Methods: We conducted a systematic review and meta-analysis (2008–2024) to estimate the prevalence of extended spectrum ß-lactamase-producing Enterobacterales (ESBL-EB) and AMR frequency across nine Central African countries. Systematic searching strategy and risk of bias assessment followed PRISMA guidelines. Prevalence or frequencies and 95% confidence intervals were estimated using a random effects meta-model with the Der Simonian and Laird method. Results: Here we show an ESBL-EB pooled prevalence of 22% (41% for carriage and 10% in clinical samples) for the 24 selected articles assessing ESBL-EB. For the 26 selected articles assessing AMR frequency, we find it is high for cotrimoxazole (63–81%), amoxicillin/clavulanic acid (43–63%), ciprofloxacin (24–33%), and remains lower for nitrofurantoin (12–18%) and amikacin (13–19%). We provide pooled estimates for alternative agents and highlight the near-total absence of data for WHO Reserve antibiotics, including carbapenems, newer β-lactam/β-lactamase inhibitors, and fosfomycin. Significant heterogeneity and high exclusion rate due to risk of bias reflect major diagnostic limitations in the region. Conclusions: The high prevalence of AMR in Central Africa underscores the urgent need to strengthen antimicrobial susceptibility testing capacities, restrict empirical use of key antibiotics, and ensure equitable access to effective antimicrobials. Without coordinated investments for microbiology capacities scale-up, prescription regulation, and strategies for water, sanitation and hygiene, and infection prevention and control, patient outcomes and regional AMR containment will be jeopardized.
DOI: 10.15468/dl.n7hv3x
title: Occurrence Download

description: A dataset containing 234942 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Geothlypis formosa)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 234942 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009244-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fsx9hh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Combretum indicum",
 "Country is Angola",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009274-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.668khk
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Combretum indicum",
 "Country is Burkina Faso",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009275-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntfbb2
title: Occurrence Download

description: A dataset containing 224111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Occurrence records of southern African aquatic biodiversity, EWT: African Crane Conservation Programme Sightings, AM: Freshwater Invertebrates (1900-2005), KwaZulu-Natal Museum-Entomology-collection, UCT: Southern African Butterfly Conservation Assessment (1815-2009), iNaturalist Research-grade Observations, EOD – eBird Observation Dataset, Southern African Bird Atlas Project, Botanical Database of Southern Africa (BODATSA): Botanical Collections, Southern African Bird Atlas Project 2)",
 "Geometry POLYGON((27.7 -32,30 -32,30 -30.2,27.7 -30.2,27.7 -32))"
 ]
}

 The dataset includes 224111 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009214-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wa9uyu
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cyphocharax laticlavius)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009276-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hkqj5m
title: Occurrence Download

description: A dataset containing 1461 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chromis fumea"
 ]
}

 The dataset includes 1461 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009277-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fpwznc
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Flemingia strobilifera",
 "Country is Jamaica",
 "HasCoordinate is true"
 ]
}

 The dataset includes 46 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009278-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28432856.v1
title: raw data for '<b>Cats are More Susceptible to the Prevalent H3 Subtype Influenza Viruses than Dogs</b>'

description: <b>Materials and methods</b><b>Viruses</b>The following influenza viral strains were used in this study: H3N2 AIV (A/duck/Guangdong/W12/2011) (Accession Number: JX175250.1); H3N8 AIV (A/Gallinula/Guangzhou/A1/2017) (Accession Number: ON287054.1); H3N2 SIV (A/Swine/Guangdong/FS4/2015) (GISAID isolate-ID: EPI_ISL_249845); H3N2 CIV (A/canine/Guangdong/1/2006) (Accession Number: GU433351.1). The viral titers were evaluated by EID<sub>50</sub>/ml assay. Virus stocks were propagated in 9- to 12-day-old embryonated specific pathogen-free (SPF) chicken eggs and titrated using the EID<sub>50</sub> assay.<b>Animals and grouping</b>Sixteen 9- to 11-week-old beagles and sixteen 9- to 12-week-old domestic shorthair cats, all seronegative for influenza A viruses, were used in this study. Animals were randomly divided into five groups for both beagles and shorthair cats separately: three experimental groups and two control groups. Each experimental group consisted of four animals, and each control group consisted of two animals. All animals were anesthetized with propofol (1-2.5 mg/kg) and intranasally inoculated with 10⁶ EID<sub>50</sub> of the corresponding virus in 1.0 mL PBS. Control groups were inoculated with 1.0 mL pathogen-free SPF chicken embryo allantoic liquid.<b>Clinical signs and seroconversion</b>Clinical signs and rectal temperature were monitored daily for 14 days post-inoculation (dpi). Nasal swabs were collected daily from 1 to 14 dpi and titrated by EID<sub>50</sub> assay in SPF chicken eggs. Blood samples were collected at 0, 3, 5, 7, 14, and 21 dpi for serological antibodies assessment, treated with receptor-destroying enzyme (RDE), and subjected to hemagglutination inhibition (HI) assay.<b>Viral replication and </b><b>pathological examination</b>At 4 dpi, one animal from each group was euthanized with an intravenous injection of pentobarbital sodium (150-200 mg/kg). Lung, trachea, nasal turbinate, heart, liver, spleen, kidney, intestine, stomach, and brain tissues were collected. In consideration of animal welfare, euthanasia was performed on only one animal per group in this study, and three tissue samples were collected from each type of tissue. Tissues were fixed in 10% neutral buffered formalin, processed for hematoxylin and eosin (H&E) staining, and immunohistochemistry (IHC). All tissues were weighed and homogenized in 1 mL of PBS per gram, then centrifuged to obtain the supernatant, which was titrated using the EID<sub>50</sub> assay to assess viral replication.<b>Ethics statement</b>All procedures in animal experiments met the requirements of animal welfare and were approved by the Experimental Animal Welfare Ethics Committee of South China Agricultural University (protocol code: 2024c016). All experimental animals were monitored by university-licensed veterinarians. All animal experiments were performed in a level 2 animal biosafety laboratory (A-BSL level 2).
DOI: 10.15468/dl.gj92s2
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astragalus permiensis"
 ]
}

 The dataset includes 18 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009279-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.syuxhr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Combretum indicum",
 "Country is Comoros",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009280-250802193616735/datasets/export for details.
DOI: 10.6084/m9.figshare.29820446
title: Regression.spv

description: ANOVA ANALYSIS
DOI: 10.6084/m9.figshare.29820446.v1
title: Regression.spv

description: ANOVA ANALYSIS
DOI: 10.15468/dl.rtxmrs
title: Occurrence Download

description: A dataset containing 152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio linearifolius",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 152 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009281-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fv8eks
title: Occurrence Download

description: A dataset containing 75 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.12.1_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Ovis aries"
 ]
}

 The dataset includes 75 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009282-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjwjab
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ADO9919"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009283-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kjqp3v
title: Occurrence Download

description: A dataset containing 25263955 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Corvus brachyrhynchos"
 ]
}

 The dataset includes 25263955 records from 190 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009250-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7dzpja
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Nanochromis splendens)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009284-250802193616735/datasets/export for details.
DOI: 10.15468/dl.n3z44z
title: Occurrence Download

description: A dataset containing 683652 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Poa pratensis"
 ]
}

 The dataset includes 683652 records from 3012 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009183-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/lj5-dv5-f19
title: Arabis verna (L.) R. Br.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/sb3-4ya-pk4
title: Crepis albida Vill.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/ts7-2vj-y9m
title: Carex flacca Schreb.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzkw1
title: CCDC 625204: Experimental Crystal Structure Determination

description: Related Article: M.J.Prakash, T.P.Radhakrishnan|2006|Chem.Mater.|18|2943|doi:10.1021/cm052607q
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/bvp-dkx-hm4
title: Misopates Raf.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/lv5-eqq-ngc
title: Carex sylvatica Huds.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzkx2
title: CCDC 625205: Experimental Crystal Structure Determination

description: Related Article: M.J.Prakash, T.P.Radhakrishnan|2006|Chem.Mater.|18|2943|doi:10.1021/cm052607q
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccnzky3
title: CCDC 625206: Experimental Crystal Structure Determination

description: Related Article: Chao Chen, Yunling Liu, Shuhua Wang, Guanghua Li, Minghui Bi, Zhuo Yi, Wenqin Pang|2006|Chem.Mater.|18|2950|doi:10.1021/cm052395x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/56k-sk2-797
title: Silene acaulis (L.) Jacq.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/k44-fqv-djw
title: Arabis verna (L.) R. Br.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/wz1-62g-lce
title: Brachypodium rupestre (Host) Roem. & Schult.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzkz4
title: CCDC 625207: Experimental Crystal Structure Determination

description: Related Article: Chao Chen, Yunling Liu, Shuhua Wang, Guanghua Li, Minghui Bi, Zhuo Yi, Wenqin Pang|2006|Chem.Mater.|18|2950|doi:10.1021/cm052395x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/7jc-ynr-e7p
title: Adoxa moschatellina L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/ksg-mls-r6n
title: Scutellaria orientalis L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzl06
title: CCDC 625208: Experimental Crystal Structure Determination

description: Related Article: Chao Chen, Yunling Liu, Shuhua Wang, Guanghua Li, Minghui Bi, Zhuo Yi, Wenqin Pang|2006|Chem.Mater.|18|2950|doi:10.1021/cm052395x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/2nt-vl1-ktl
title: Achillea odorata L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/3mq-yzp-mgp
title: Tanacetum polycephalum Sch. Bip.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/44g-1b8-1k2
title: Carex atrata L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzl17
title: CCDC 625209: Experimental Crystal Structure Determination

description: Related Article: Hualong Pan, Yuning Li, Yiliang Wu, Ping Liu, B.S.Ong, Shiping Zhu, Gu Xu|2006|Chem.Mater.|18|3237|doi:10.1021/cm0602592
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/15k-csg-sz3
title: Dipsacaceae Juss.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/eg2-yvs-3qa
title: Sideritis L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/m7e-x42-yq5
title: Aegilops L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzl28
title: CCDC 625210: Experimental Crystal Structure Determination

description: Related Article: K.Geramita, J.McBee, Yulong Shen, N.Radu, T.D.Tilley|2006|Chem.Mater.|18|3261|doi:10.1021/cm060346u
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/52c-6rs-6lx
title: Leontodon saxatilis Lam.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/c70-wn9-lb6
title: Alyssum L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/yt5-b0w-dc3
title: Fritillaria L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzl39
title: CCDC 625211: Experimental Crystal Structure Determination

description: Related Article: K.Geramita, J.McBee, Yulong Shen, N.Radu, T.D.Tilley|2006|Chem.Mater.|18|3261|doi:10.1021/cm060346u
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/1ft-6hg-03d
title: Compositae Giseke

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/5s6-44m-gqc
title: Rumex cristatus DC.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzl9h
title: CCDC 625217: Experimental Crystal Structure Determination

description: Related Article: Xinnan Zhang, J.P.Johnson, J.W.Kampf, A.J.Matzger|2006|Chem.Mater.|18|3470|doi:10.1021/cm0609348
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/bfm-j0q-5jb
title: Valerianella Mill.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/g7y-at7-1mf
title: Phyteuma L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzlbj
title: CCDC 625218: Experimental Crystal Structure Determination

description: Related Article: Xinnan Zhang, J.P.Johnson, J.W.Kampf, A.J.Matzger|2006|Chem.Mater.|18|3470|doi:10.1021/cm0609348
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/bb0-b5z-58m
title: Ranunculus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/dw6-lb2-zje
title: Euphorbia glareosa Pall. ex M. Bieb.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnzlck
title: CCDC 625219: Experimental Crystal Structure Determination

description: Related Article: Xinnan Zhang, J.P.Johnson, J.W.Kampf, A.J.Matzger|2006|Chem.Mater.|18|3470|doi:10.1021/cm0609348
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/1tn-rfn-r5p
title: Parietaria lusitanica L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.