cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25387/g3.15141024
title: Supplemental Material for Shahrestani et al., 2021

description: File S9: SNP comparisons of immune selected and control populations using CMH and GLM tests. <br>File S2: Phenotype data comparing immune selected and control populations for resistance to ARSEF 12460<br>File S3: Phenotype data comparing immune selected and control populations for resistance to GHA<br>File S4: Phenotype data comparing immune selected and control populations for resistance to Providencia rettgeri and Enterococcus faecalis
DOI: 10.6084/m9.figshare.15141364
title: Development of a text-based chatroom HIV prevention and confidence-building intervention for same-sex attracted young males in South England

description: The aim of this study was to develop a virtual youth center, providing a safe and supportive online space for sexual minority young men to talk and learn about HIV, sexuality, relationships and sex – topics rarely addressed inclusively in mainstream education. Eleven male participants aged 15–19 years living in South England completed the full programme of three text-based chatroom sessions. Participants were guided through discussions to introduce new knowledge and build emotional resilience. Self-report measures were taken before and after the programme. Recruitment to the project was challenging owing, in large part, to appropriately rigorous safeguarding protocols. All those taking part either maintained or improved their level of HIV knowledge and felt more confident about their sexuality. Participants described the experience as “informative” and “enjoyable”. Further iterations of the model could seek to measure behavioral change and use more robust evaluation methods, such as a comparison group.
DOI: 10.6084/m9.figshare.15141364.v1
title: Development of a text-based chatroom HIV prevention and confidence-building intervention for same-sex attracted young males in South England

description: The aim of this study was to develop a virtual youth center, providing a safe and supportive online space for sexual minority young men to talk and learn about HIV, sexuality, relationships and sex – topics rarely addressed inclusively in mainstream education. Eleven male participants aged 15–19 years living in South England completed the full programme of three text-based chatroom sessions. Participants were guided through discussions to introduce new knowledge and build emotional resilience. Self-report measures were taken before and after the programme. Recruitment to the project was challenging owing, in large part, to appropriately rigorous safeguarding protocols. All those taking part either maintained or improved their level of HIV knowledge and felt more confident about their sexuality. Participants described the experience as “informative” and “enjoyable”. Further iterations of the model could seek to measure behavioral change and use more robust evaluation methods, such as a comparison group.
DOI: 10.25934/00004487.1
title: IPD datapackage for study 'A Randomized, Multicenter, Double-Blind, Placebo-Controlled Phase 3 Study of Weekly Paclitaxel With or Without Ramucirumab (IMC-1121B) Drug Product in Patients With Metastatic Gastric Adenocarcinoma, Refractory to or Progressive After First-Line Therapy With Platinum and Fluoropyrimidine' included in Research Request: 'Evaluate statistical methodology'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5517/ccdc.csd.cc28pmm7
title: CCDC 2106159: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28pp1q
title: CCDC 2106203: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Effendy, Allan H. White|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28pqh6
title: CCDC 2106248: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28pqsh
title: CCDC 2106257: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28pqtj
title: CCDC 2106258: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28pqvk
title: CCDC 2106259: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc28q0mn
title: CCDC 2106531: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Robert D. Hart, Allan H. White|2021|CSD Communication|||
DOI: 10.34740/kaggle/dsv/2595446
title: hospital-price-transparency
DOI: 10.21227/hc74-3s30
title: RSSI measurements in office space for indoor localization

description: RSSI measurements collected by four anchors while receiving messages from a single mobile node transmitting advertisement and extended advertisement messages in all BLE channels (both primary and secondary advertisement channels). Tests conducted in 10x10 m office area (no large obstacles), with 4 anchors located in the corners of the area.
DOI: 10.5281/zenodo.4754951
title: Arctic topographic asymmetry

description: North-South topographic asymmetry index which is the base-10 logarithm of the ratio of the median slope of the north-facing to that of the south-facing pixels within a 25 km by 25 km cell. The data set consists of 5 file pairs, each pair comprising the index itself and its bootstrap-derived standard error estimate (se suffix) bandpass_logratio: N-S logratio asymmetry index using the baseline configuration (0.04 slope threshold, bandpass filter) bandpass_logratioEW: E-W logratio asymmetry index using the baseline configuration bandpass002_logratio: N-S index using a slope threshold of 0.02 bandpass008_logratio: N-S index using a slope threshold of 0.08 lowpass_logratio: N-S index without high-pass filtering The data were derived from the ArcticDEM: <em>Porter, Claire; Morin, Paul; Howat, Ian; Noh, Myoung-Jon; Bates, Brian; Peterman, Kenneth; Keesey, Scott; Schlenk, Matthew; Gardiner, Judith; Tomko, Karen; Willis, Michael; Kelleher, Cole; Cloutier, Michael; Husby, Eric; Foga, Steven; Nakamura, Hitomi; Platson, Melisa; Wethington, Michael, Jr.; Williamson, Cathleen; Bauer, Gregory; Enos, Jeremy; Arnold, Galen; Kramer, William; Becker, Peter; Doshi, Abhijit; D’Souza, Cristelle; Cummens, Pat; Laurier, Fabien; Bojesen, Mikkel, 2018, “ArcticDEM”, https://doi.org/10.7910/DVN/OHHUKH, Harvard Dataverse, V1</em> The data are associated with Zwieback, S. (2021). Topographic asymmetry across the Arctic. <em>Geophysical Research Letters</em>, 48, e2021GL094895. https://doi.org/10.1029/2021GL094895
DOI: 10.5281/zenodo.4754950
title: Arctic topographic asymmetry

description: North-South topographic asymmetry index which is the base-10 logarithm of the ratio of the median slope of the north-facing to that of the south-facing pixels within a 25 km by 25 km cell. The data set consists of 5 file pairs, each pair comprising the index itself and its bootstrap-derived standard error estimate (se suffix) bandpass_logratio: N-S logratio asymmetry index using the baseline configuration (0.04 slope threshold, bandpass filter) bandpass_logratioEW: E-W logratio asymmetry index using the baseline configuration bandpass002_logratio: N-S index using a slope threshold of 0.02 bandpass008_logratio: N-S index using a slope threshold of 0.08 lowpass_logratio: N-S index without high-pass filtering The data were derived from the ArcticDEM: <em>Porter, Claire; Morin, Paul; Howat, Ian; Noh, Myoung-Jon; Bates, Brian; Peterman, Kenneth; Keesey, Scott; Schlenk, Matthew; Gardiner, Judith; Tomko, Karen; Willis, Michael; Kelleher, Cole; Cloutier, Michael; Husby, Eric; Foga, Steven; Nakamura, Hitomi; Platson, Melisa; Wethington, Michael, Jr.; Williamson, Cathleen; Bauer, Gregory; Enos, Jeremy; Arnold, Galen; Kramer, William; Becker, Peter; Doshi, Abhijit; D’Souza, Cristelle; Cummens, Pat; Laurier, Fabien; Bojesen, Mikkel, 2018, “ArcticDEM”, https://doi.org/10.7910/DVN/OHHUKH, Harvard Dataverse, V1</em> The data are associated with Zwieback, S. (2021). Topographic asymmetry across the Arctic. <em>Geophysical Research Letters</em>, 48, e2021GL094895. https://doi.org/10.1029/2021GL094895
DOI: 10.25919/bkad-7y16
title: Parkes observations for project P1066 semester 2021APRS_02

description: We propose 36 hrs of Parkes observations to continue our successful Deeper, Wider, Faster (DWF) program to detect fast transients and fast radio burst (FRB) counterparts and help resolve their nature. DWF coordinates over 80 observatories worldwide at all wavelengths, from radio to gamma-ray to detect and follow-up FRBs and other elusive fast (millisecond-to-hours duration) transients. Crucially, we coordinate simultaneous deep, fast-cadenced, wide-field observations at all wavelengths to observe the same field at the same time as Parkes, enabling multi-wavelength detection before, during, and after the radio detection. Little to no multi-wavelength observations to any significant depth have been done on these timescales, leaving this parameter space underexplored. DWF coordinates major facilities to observe with Parkes, such as South Pole Telescope (mm/sub-mm), GROND (infrared), CTIO Dark Energy Camera (optical), Astrosat (UV/X-ray), HXMT (X-ray), HESS (gamma-ray), and Pierre Auger (high-energy). We perform realtime data processing and transient identification at all wavelengths that enables triggering our deep, rapid-response (within minutes) follow up programs for deep spectroscopy and imaging using the world's largest telescopes (e.g., Keck, VLT, Gemini, SALT, ATCA).
DOI: 10.25919/5bpy-xs92
title: Parkes observations for project P1066 semester 2021APRS_03

description: We propose 36 hrs of Parkes observations to continue our successful Deeper, Wider, Faster (DWF) program to detect fast transients and fast radio burst (FRB) counterparts and help resolve their nature. DWF coordinates over 80 observatories worldwide at all wavelengths, from radio to gamma-ray to detect and follow-up FRBs and other elusive fast (millisecond-to-hours duration) transients. Crucially, we coordinate simultaneous deep, fast-cadenced, wide-field observations at all wavelengths to observe the same field at the same time as Parkes, enabling multi-wavelength detection before, during, and after the radio detection. Little to no multi-wavelength observations to any significant depth have been done on these timescales, leaving this parameter space underexplored. DWF coordinates major facilities to observe with Parkes, such as South Pole Telescope (mm/sub-mm), GROND (infrared), CTIO Dark Energy Camera (optical), Astrosat (UV/X-ray), HXMT (X-ray), HESS (gamma-ray), and Pierre Auger (high-energy). We perform realtime data processing and transient identification at all wavelengths that enables triggering our deep, rapid-response (within minutes) follow up programs for deep spectroscopy and imaging using the world's largest telescopes (e.g., Keck, VLT, Gemini, SALT, ATCA).
DOI: 10.5281/zenodo.5213727
title: Data for "A Comparison of Linear Solvers for Resolving Flow in Three-Dimensional Discrete Fracture Networks"

description: This data is related to the manuscript "A Comparison of Linear Solvers for Resolving Flow in Three-Dimensional Discrete Fracture Networks". It contains meshes, boundary conditions, and medium properties for discrete fracture networks used to test fluid flow solvers.
DOI: 10.5281/zenodo.5213726
title: Data for "A Comparison of Linear Solvers for Resolving Flow in Three-Dimensional Discrete Fracture Networks"

description: This data is related to the manuscript "A Comparison of Linear Solvers for Resolving Flow in Three-Dimensional Discrete Fracture Networks". It contains meshes, boundary conditions, and medium properties for discrete fracture networks used to test fluid flow solvers.
DOI: 10.6084/m9.figshare.3761562.v1974
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5281/zenodo.5484428
title: Source data used to reproduce global maps for Ou et al. 2021 (Deep Mitigation of CO2 and non-CO2 Greenhouse Gases towards 1.5°C and 2°C Futures)

description: Shape file and R code used to reproduce Fig 3d and SI figures with global maps, using an open-source R package "sf" (https://r-spatial.github.io/sf/ )
DOI: 10.5281/zenodo.5484427
title: Source data used to reproduce global maps for Ou et al. 2021 (Deep Mitigation of CO2 and non-CO2 Greenhouse Gases towards 1.5°C and 2°C Futures)

description: Shape file and R code used to reproduce Fig 3d and SI figures with global maps, using an open-source R package "sf" (https://r-spatial.github.io/sf/ )
DOI: 10.6084/m9.figshare.16529640.v1
title: Ensemble of Nucleic Acid Absolute Quantitation Modules for Accurate Copy Number Variation Detection and Targeted RNA Profiling

description: NGS data of clinical samples.
DOI: 10.6084/m9.figshare.16583552
title: data3Submission.dta

description: Willingness to pay database for water supply in Chile
DOI: 10.6084/m9.figshare.16583552.v1
title: data3Submission.dta

description: Willingness to pay database for water supply in Chile
DOI: 10.5519/qd.ibfl0pql
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (82 records)
DOI: 10.34740/kaggle/dsv/2225563
title: Synthetic Gaze and Face Segmentation
DOI: 10.34740/kaggle/dsv/2111884
title: Synthetic Human Eyes
DOI: 10.17909/t9-kx86-v341
title: Star Formation in NGC 3344
DOI: 10.5281/zenodo.5466945
title: gabriel-milan/sotaque-brasileiro: Sotaque Brasileiro

description: Uma base de dados para estudo de regionalismos brasileiros através da voz.
DOI: 10.5281/zenodo.5483897
title: Metabolic Derangement in Polycystic Kidney Disease Mouse Models Is Ameliorated by Mitochondrial-Targeted Antioxidants

description: Autosomal dominant polycystic kidney disease (ADPKD) is characterized by progressively enlarging cysts. Here we elucidate the interplay between oxidative stress, mitochondrial dysfunction, and metabolic derangement using two mouse models of PKD1 mutation, PKD1RC/null and PKD1RC/RC. Mouse kidneys with PKD1 mutation have decreased mitochondrial complexes activity. Targeted proteomics analysis shows a significant decrease in proteins involved in the TCA cycle, fatty acid oxidation (FAO), respiratory complexes, and endogenous antioxidants. Overexpressing mitochondrial-targeted catalase (mCAT) using adeno-associated virus reduces mitochondrial ROS, oxidative damage, ameliorates the progression of PKD and partially restores expression of proteins involved in FAO and the TCA cycle. In human ADPKD cells, inducing mitochondrial ROS increased ERK1/2 phosphorylation and decreased AMPK phosphorylation, whereas the converse was observed with increased scavenging of ROS in the mitochondria. Treatment with the mitochondrial protective peptide, SS31, recapitulates the beneficial effects of mCAT, supporting its potential application as a novel therapeutic for ADPKD.
description: The analyses used selected reaction monitoring to measure the abundance of a series of peptides in whole kidney homogenates digested with trypsin as markers for the abundance of the parent protein. The raw mass spectrometry data files were acquired on a Thermo TSQ Quantiva. The data processing files used the program Skyline.
DOI: 10.5281/zenodo.5483896
title: Metabolic Derangement in Polycystic Kidney Disease Mouse Models Is Ameliorated by Mitochondrial-Targeted Antioxidants

description: Autosomal dominant polycystic kidney disease (ADPKD) is characterized by progressively enlarging cysts. Here we elucidate the interplay between oxidative stress, mitochondrial dysfunction, and metabolic derangement using two mouse models of PKD1 mutation, PKD1RC/null and PKD1RC/RC. Mouse kidneys with PKD1 mutation have decreased mitochondrial complexes activity. Targeted proteomics analysis shows a significant decrease in proteins involved in the TCA cycle, fatty acid oxidation (FAO), respiratory complexes, and endogenous antioxidants. Overexpressing mitochondrial-targeted catalase (mCAT) using adeno-associated virus reduces mitochondrial ROS, oxidative damage, ameliorates the progression of PKD and partially restores expression of proteins involved in FAO and the TCA cycle. In human ADPKD cells, inducing mitochondrial ROS increased ERK1/2 phosphorylation and decreased AMPK phosphorylation, whereas the converse was observed with increased scavenging of ROS in the mitochondria. Treatment with the mitochondrial protective peptide, SS31, recapitulates the beneficial effects of mCAT, supporting its potential application as a novel therapeutic for ADPKD.
description: The analyses used selected reaction monitoring to measure the abundance of a series of peptides in whole kidney homogenates digested with trypsin as markers for the abundance of the parent protein. The raw mass spectrometry data files were acquired on a Thermo TSQ Quantiva. The data processing files used the program Skyline.
DOI: 10.6084/m9.figshare.16529640.v2
title: Ensemble of Nucleic Acid Absolute Quantitation Modules for Accurate Copy Number Variation Detection and Targeted RNA Profiling

description: NGS data of clinical samples.
DOI: 10.5281/zenodo.5484693
title: Infant Gray Matter Development

description: Source data associated with Infant gray matter development project
DOI: 10.6084/m9.figshare.16583600
title: Sustainability Campaign Evaluation

description: These data come from a cross-sectional survey where we measured self-reported exposure to a campaign promoting sustainable behaviors and outcomes based on constructs from the theory of planned behavior.
DOI: 10.6084/m9.figshare.16583600.v1
title: Sustainability Campaign Evaluation

description: These data come from a cross-sectional survey where we measured self-reported exposure to a campaign promoting sustainable behaviors and outcomes based on constructs from the theory of planned behavior.
DOI: 10.6073/pasta/ee080715de6c8f4c68ea79bf36f2bdcf
title: North Temperate Lakes LTER: High Frequency Dissolved Oxygen Data - Trout Lake Buoy2 - ADCP 2005

description: During the fall 2005, this instrumented buoy on Trout Lake was equipped with 4 Greenspan dissolved oxygen sensors placed at depths from the lake surface to 10m. Parameters measured at each depth included dissolved oxygen (DO), DO saturation and water temperature. Currently, this buoy measures air temperature, relative humidity and various wind parameters. It also is equipped with a thermistor chain that measures water temperature from depths placed every 0.5-1m from the surface through 13m. An acoustic Doppler current profiler (ADCP) is associated with this buoy. Data are usually collected every 10 minutes with occasional periods of 2 minute data for short periods to answer specific questions. After correcting for flux to or from the atmosphere and vertical mixing within the water column, high frequency measurements of dissolved gases such as carbon dioxide and oxygen can be used to estimate gross primary productivity, respiration, and net ecosystem productivity, the basic components of whole lake metabolism. Dissolved oxygen (DO) data were collected for period 27 Aug 2005 through 3 Nov 2005. Sampling Frequency: varies for instantaneous sample. averaged to hourly and daily values from one minute samples Number of sites: 1
DOI: 10.6084/m9.figshare.14749484.v1
title: Development of a liquid chromatography-tandem mass spectrometry method to determine colistin, bacitracin and virginiamycin M1 at cross-contamination levels in animal feed

description: Cross-contamination of animal feed with antibiotics may occur during manufacturing in feed mills, because shared production lines can be used for medicated and non-medicated feed, but may also occur during transport, storage and at the farm level. This is a major issue in the current context where antimicrobial usage must be controlled in order to maintain their effectiveness. A LC-MS/MS method was developed for the determination of colistin, bacitracin A and virginiamycin M1 in feed for pigs, poultry and rabbits at concentrations similar to those encountered in cross-contamination. After investigating various issues related to colistin behaviour and matrix effects, we successfully validated this method according to the requirements of European regulations in terms of linearity, trueness, precision, limit of quantification and limit of decision. Trueness ranged 88.6–107.8% and precision ranged 12.6–21.2%. We then applied this method to the analysis of medicated pig feed to check the performance of the method on “real” samples of medicated feed. We subsequently analysed non-medicated pig, and rabbit feed samples, collected directly on farms, to check the rate of cross-contamination. No samples were contaminated by colistin, bacitracin, or virginiamycin.
DOI: 10.6084/m9.figshare.15140187
title: Hazard prioritisation of substances in printing inks and adhesives applied to plastic food packaging

description: Thousands of intentionally added substances can be used in printing inks and adhesives applied to plastic food packaging. Some of them can be transferred to foodstuffs through a phenomenon called migration, arising concerns on the potential adverse health effects derived from the exposure to chemicals that have not yet been assessed for their risks to humans. The large number of the substances concerned and the lack of prioritisation strategies hamper the work of control authorities, since it is not clear which substances should be monitored as first priority. In this study, a hazard prioritisation strategy is proposed. An inventory listing more than 6,000 substances used in inks and adhesives applied to plastic food packaging was compiled and filtered using several exclusion criteria aimed to set apart those substances for which there is no apparent need for further evaluation or because fall into one of the exclusion categories of the Threshold of Toxicological Concern (TTC) approach. Additionally, substances with a molecular weight &gt;1,000 Da were removed. Approximately 2,300 substances were retained, for which a comprehensive hazard profiling was conducted based on the general scheme for the application of the TTC approach. First, structural alerts for genotoxic and non-genotoxic carcinogenicity were investigated. If a substance was neither genotoxic nor belonging to the chemical classes of organophosphates and carbamates, the Cramer classification was used. Furthermore, the substances were searched for their presence in three so-called ‘Substances of Concern’ lists and RASFF notifications. Groups of high, medium and low priority substances were established, resulting in 1,660 substances classified as high and medium priority. A panel of five experts evaluated these substances with respect to their relevance for further risk evaluations. By applying this hazard prioritisation strategy, 696 substances were identified as ‘Very High Priority Substances’ (VHPS) for which further assessments should be performed.