cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25909/25341625.v1
title: A new species of the iconic triradial Ediacaran genus <i>Tribrachidium</i>, from Nilpena Ediacara National Park, Flinders Ranges (South Australia)

description: <i>Tribrachidium heraldicum</i><i> </i>is a tri-radial Ediacaran organism found in abundance within the Ediacara Member of the Flinders Ranges, South Australia. Here we report and describe a new species within the genus <i>Tribrachidium</i>: <i>Tribrachidium gehlingi</i> sp. nov. from Nilpena Ediacara National Park (NENP), South Australia. <i>T. gehlingi</i><i> </i>sp. nov. has low relief and three slightly curved main arm-like structures that leave a conspicuous gap between the end of the arm-like structures and rim. In place of the ‘bulla’ found on <i>T. herladicum</i>, there are three secondary arm-like structures approximately half the length of the main arm-like structures. We find that key morphological differences between the species are statistically significantly different from <i>T. heraldicum</i>. Additionally, both species occur together within the same fossiliferous event horizons, indicating that the observed morphological differences are unlikely to be a result of taphonomy.
DOI: 10.15468/dl.nb8p2t
title: Occurrence Download

description: A dataset containing 669 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Emberiza aureola"
 ]
}

 The dataset includes 669 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054233-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25909/25458031.v1
title: Dataset: Optimal Control Simulations Tracking Wearable Sensors Provides Comparable Running Gait Kinematics to Marker-Based Motion Capture

description: The objective of this study was to compare two IMU-based modeling approaches with optical marker-based motion capture in reconstructing running gait joint kinematics. The first was a conventional approach using inverse kinematics while the second was a novel method leveraging optimal control simulations. Six subjects performed treadmill running at three speeds whilst marker trajectories and IMU signals were collected concurrently. A subject-specific biomechanical model consisted of a 3D representation of the lower body and torso was used, incorporating contact spheres to simulate ground contact in in the optimal control simulations. The primary objective of the optimal control simulations was tracking accelerations, angular velocities, and orientations of 8 sensors with the simulated signals from the model sensors. Additional constraints, reflecting physiological and biomechanical principles and acheiving dynamic consistency were enforced. The objective of the IMU-based inverse kinematics was to minimize the difference between input and simulated sensor orientations. The joint kinematics derived from both methods were evaluated against optical marker-based motion capture across a range of running speeds.
DOI: 10.25909/25458031
title: Dataset: Optimal Control Simulations Tracking Wearable Sensors Provides Comparable Running Gait Kinematics to Marker-Based Motion Capture

description: The objective of this study was to compare two IMU-based modeling approaches with optical marker-based motion capture in reconstructing running gait joint kinematics. The first was a conventional approach using inverse kinematics while the second was a novel method leveraging optimal control simulations. Six subjects performed treadmill running at three speeds whilst marker trajectories and IMU signals were collected concurrently. A subject-specific biomechanical model consisted of a 3D representation of the lower body and torso was used, incorporating contact spheres to simulate ground contact in in the optimal control simulations. The primary objective of the optimal control simulations was tracking accelerations, angular velocities, and orientations of 8 sensors with the simulated signals from the model sensors. Additional constraints, reflecting physiological and biomechanical principles and acheiving dynamic consistency were enforced. The objective of the IMU-based inverse kinematics was to minimize the difference between input and simulated sensor orientations. The joint kinematics derived from both methods were evaluated against optical marker-based motion capture across a range of running speeds.
DOI: 10.25909/25468930
title: C3-JAN 23-2023.dta

description: Stata dataset for main specification
DOI: 10.25909/25468930.v1
title: C3-JAN 23-2023.dta

description: Stata dataset for main specification
DOI: 10.15468/dl.r7bkey
title: Occurrence Download

description: A dataset listing the 418 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Plantas Acuáticas de la Orinoquía Colombiana"
 ]
}

 The dataset's 418 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054231-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25909/25530037
title: Supplemental Material: Absence of evidence for Palaeoproterozoic eclogite-facies metamorphism in East Antarctica: no record of subduction orogenesis during Nuna development

description: <b>Supplementary material for Brown (2024), PhD thesis - Chapter 3 - </b><b>Absence of evidence for Palaeoproterozoic eclogite-facies metamorphism in East Antarctica: no record of subduction orogenesis during Nuna development</b><b>Table S1.</b> LA–ICP–MS major and trace-element results for zircon from sample 90-131A. U-Pb isotope data are provided for zircon standards GJ (c. 602 Ma), Plesovice (c. 338 Ma) and 91500 (c. 1054 Ma). Trace-element data are provided for synthetic glass standard NIST-610. (bd) signifies below detection. Pb is Pb(204).
DOI: 10.25909/25530037.v1
title: Supplemental Material: Absence of evidence for Palaeoproterozoic eclogite-facies metamorphism in East Antarctica: no record of subduction orogenesis during Nuna development

description: <b>Supplementary material for Brown (2024), PhD thesis - Chapter 3 - </b><b>Absence of evidence for Palaeoproterozoic eclogite-facies metamorphism in East Antarctica: no record of subduction orogenesis during Nuna development</b><b>Table S1.</b> LA–ICP–MS major and trace-element results for zircon from sample 90-131A. U-Pb isotope data are provided for zircon standards GJ (c. 602 Ma), Plesovice (c. 338 Ma) and 91500 (c. 1054 Ma). Trace-element data are provided for synthetic glass standard NIST-610. (bd) signifies below detection. Pb is Pb(204).
DOI: 10.25909/25591137
title: Reference genomes for contaminants

description: Reference genomes for contaminants
DOI: 10.25909/25591137.v1
title: Reference genomes for contaminants

description: Reference genomes for contaminants
DOI: 10.25909/25591146
title: Large files used in data visualisations

description: Larger dataset files used in data visualisations. For more in depth explanation please see github repository read me.
DOI: 10.25909/25591146.v1
title: Large files used in data visualisations

description: Larger dataset files used in data visualisations. For more in depth explanation please see github repository read me.
DOI: 10.25909/25591152
title: Processed Sourmash Database

description: GTDB version rs-214, prepared for use in sourmash pipeline.
DOI: 10.25909/25591152.v1
title: Processed Sourmash Database

description: GTDB version rs-214, prepared for use in sourmash pipeline.
DOI: 10.25909/25591155
title: Raw data (fastq.gz files) for short read 16s dataset

description: Raw data (fastq.gz files) for short read 16s dataset
DOI: 10.25909/25591155.v1
title: Raw data (fastq.gz files) for short read 16s dataset

description: Raw data (fastq.gz files) for short read 16s dataset
DOI: 10.25909/25591158
title: Raw data (fastq.gz files) for short read shotgun dataset

description: Raw data (fastq.gz files) for short read shotgun dataset
DOI: 10.25909/25591158.v1
title: Raw data (fastq.gz files) for short read shotgun dataset

description: Raw data (fastq.gz files) for short read shotgun dataset
DOI: 10.25909/25591161
title: Mock community raw data (fastq.gz files) for long read ONT 16s with KAPA primer dataset

description: Mock community raw data (fastq.gz files) for long read ONT 16s with KAPA primer dataset
DOI: 10.25909/25591161.v1
title: Mock community raw data (fastq.gz files) for long read ONT 16s with KAPA primer dataset

description: Mock community raw data (fastq.gz files) for long read ONT 16s with KAPA primer dataset
DOI: 10.25909/25592724
title: Mock community raw data (fastq.gz files) for long read ONT Shotgun dataset

description: Mock community raw data (fastq.gz files) for long read ONT Shotgun dataset
DOI: 10.25909/25592724.v1
title: Mock community raw data (fastq.gz files) for long read ONT Shotgun dataset

description: Mock community raw data (fastq.gz files) for long read ONT Shotgun dataset
DOI: 10.25909/25623033
title: Spinal phase-contrast and anatomical MRI in a porcine model of thoracic contusion spinal cord injury

description: Pig MRI resource materials (pre- and post-processed) to supplement the published manuscript. In this project, the folder number indicates the animal identifier.This image data set was presented and analysed in the paper:Bessen, M. A., Gayen, C. D., O'Hare, D. L., Dorrian, R. M., Quarrington, R. D., Mulaibrahimovic, A., Kurtcuoglu, V., Walls, A. C., Leonard, A. V., & Jones, C. F. (2025). Cerebrospinal fluid dynamics and subarachnoid space occlusion following traumatic spinal cord injury in the pig: an investigation using magnetic resonance imaging. <i>Fluids and Barriers of the CNS, </i>22(1), 6.Please cite this resource and the above manuscript when using these data.<br><br><br>
DOI: 10.25909/25623033.v1
title: Spinal phase-contrast and anatomical MRI in a porcine model of thoracic contusion spinal cord injury

description: Pig MRI resource materials (pre- and post-processed) to supplement the published manuscript. In this project, the folder number indicates the animal identifier.This image data set was presented and analysed in the paper:Bessen, M. A., Gayen, C. D., O'Hare, D. L., Dorrian, R. M., Quarrington, R. D., Mulaibrahimovic, A., Kurtcuoglu, V., Walls, A. C., Leonard, A. V., & Jones, C. F. (2025). Cerebrospinal fluid dynamics and subarachnoid space occlusion following traumatic spinal cord injury in the pig: an investigation using magnetic resonance imaging. <i>Fluids and Barriers of the CNS, </i>22(1), 6.Please cite this resource and the above manuscript when using these data.<br><br><br>
DOI: 10.25909/25720092
title: Mock community raw data (fastq.gz files) for long read ONT 16s with ONT primer dataset

description: Mock community raw data (fastq.gz files) for long read ONT 16s with ONT primer dataset
DOI: 10.25909/25720092.v1
title: Mock community raw data (fastq.gz files) for long read ONT 16s with ONT primer dataset

description: Mock community raw data (fastq.gz files) for long read ONT 16s with ONT primer dataset
DOI: 10.25909/25721178
title: Supplemental Material: High thermal gradient continental subduction initiated by back-arc collapse – evidence from remote south-west Tasmania

description: <b>Supplementary material for Brown (2024), PhD thesis - Chapter 8 - </b><b>High thermal gradient continental subduction initiated by back-arc collapse – evidence from remote south-west Tasmania</b>Extended methods.<b>Figure S1.</b> Extended mineral equilibria forward modelling results. Clinoamphibole is excluded from equilibria calculations. (a) <i>P</i><i>–T</i> pseudosection for the bulk-rock composition of sample NB-64, calculated at H<sub>2</sub>O-saturated conditions. The dashed white line indicates garnet stable (up-pressure). (b) <i>P–T</i> pseudosection for an effective bulk-rock composition of sample NB-64, excluding garnet core compositions. The dashed white line is the solidus. The chemical system used for all calculations is MnNCKFMASHTO. V signifies the variance of each mineral assemblage.<b>Table S1.</b> Representative EPMA results for solid solution minerals. Major element oxide compositions are given in wt%.<b>Table S2.</b> Ti-in-quartz thermometry results. Ti (ppm) concentrations acquired using EPMA. Temperatures calculated using the calibration of Osborne et al. (2022).<b>Table S3.</b> Additional details for laser-ablation and ICP–MS instruments used in this study.<b>Table S4.</b> LA–ICP–MS major element and REE results for garnet. Elemental data is provided for synthetic glass standards GSG-1G and NIST-610. Eu/Eu* calculation is provided below Table. (bd) signifies below detection.<b>Table S5.</b> LA–ICP–MS/MS Lu–Hf isotope results for apatite and garnet. Major and trace-element data for a small selection of isotopes is provided. Data is also provided for primary reference material NIST-610, 'pseudo-primary' reference materials OD306 and Hogsbo, and secondary reference materials Bamble and Black Point. (Sm/Ce)<sub>N</sub> values given for apatite unknowns (right of table). Normalisation values (chondrite) from Sun and McDonough (1989).<b>Table S6.</b> LA–ICP–MS U–Pb isotope results for rutile. Major and trace-element data for a small selection of isotopes is provided. Data is also provided for rutile standards R10 and R19, and for synthetic glass standard NIST-610. Zr-in-rutile temperatures calculated using the calibration of Tomkins et al. (2007). A pressure of 18 kbar was used.
DOI: 10.25909/25721178.v1
title: Supplemental Material: High thermal gradient continental subduction initiated by back-arc collapse – evidence from remote south-west Tasmania

description: <b>Supplementary material for Brown (2024), PhD thesis - Chapter 8 - </b><b>High thermal gradient continental subduction initiated by back-arc collapse – evidence from remote south-west Tasmania</b>Extended methods.<b>Figure S1.</b> Extended mineral equilibria forward modelling results. Clinoamphibole is excluded from equilibria calculations. (a) <i>P</i><i>–T</i> pseudosection for the bulk-rock composition of sample NB-64, calculated at H<sub>2</sub>O-saturated conditions. The dashed white line indicates garnet stable (up-pressure). (b) <i>P–T</i> pseudosection for an effective bulk-rock composition of sample NB-64, excluding garnet core compositions. The dashed white line is the solidus. The chemical system used for all calculations is MnNCKFMASHTO. V signifies the variance of each mineral assemblage.<b>Table S1.</b> Representative EPMA results for solid solution minerals. Major element oxide compositions are given in wt%.<b>Table S2.</b> Ti-in-quartz thermometry results. Ti (ppm) concentrations acquired using EPMA. Temperatures calculated using the calibration of Osborne et al. (2022).<b>Table S3.</b> Additional details for laser-ablation and ICP–MS instruments used in this study.<b>Table S4.</b> LA–ICP–MS major element and REE results for garnet. Elemental data is provided for synthetic glass standards GSG-1G and NIST-610. Eu/Eu* calculation is provided below Table. (bd) signifies below detection.<b>Table S5.</b> LA–ICP–MS/MS Lu–Hf isotope results for apatite and garnet. Major and trace-element data for a small selection of isotopes is provided. Data is also provided for primary reference material NIST-610, 'pseudo-primary' reference materials OD306 and Hogsbo, and secondary reference materials Bamble and Black Point. (Sm/Ce)<sub>N</sub> values given for apatite unknowns (right of table). Normalisation values (chondrite) from Sun and McDonough (1989).<b>Table S6.</b> LA–ICP–MS U–Pb isotope results for rutile. Major and trace-element data for a small selection of isotopes is provided. Data is also provided for rutile standards R10 and R19, and for synthetic glass standard NIST-610. Zr-in-rutile temperatures calculated using the calibration of Tomkins et al. (2007). A pressure of 18 kbar was used.
DOI: 10.5517/ccdc.csd.cc2qfp51
title: CCDC 2515593: Experimental Crystal Structure Determination

description: Related Article: Sateesh Dubbu|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25909/25734549
title: X-ray Velocimetry and flexivent measurements of Cystic Fibrosis rat models before and after a localised insult to the lung

description: Dataset of X-ray Velocimetry and flexivent measurements, taken for wildtype, phe508del and CFTR knockout cystic fibrosis rat models.<br>Datasets were taken before and after a localised insult to the left or right lung, by delivery sterile agar beads.
DOI: 10.25909/25734549.v1
title: X-ray Velocimetry and flexivent measurements of Cystic Fibrosis rat models before and after a localised insult to the lung

description: Dataset of X-ray Velocimetry and flexivent measurements, taken for wildtype, phe508del and CFTR knockout cystic fibrosis rat models.<br>Datasets were taken before and after a localised insult to the left or right lung, by delivery sterile agar beads.
DOI: 10.25909/25744134
title: Supplemental Material: Targeted P–T modelling and in-situ garnet dating on polymetamorphic metapelite provides the first compelling evidence for Rodinian tectonism recorded in south-west Tasmania

description: <b>Supplementary material for Brown (2024), PhD thesis - Chapter 7 - </b><b>Targeted P–T modelling and in-situ garnet dating on polymetamorphic metapelite provides the first compelling evidence for Rodinian tectonism recorded in south-west Tasmania</b>Extended methods.<b>Figure S1.</b> Modelled mineral modal proportions and compositions for the <i>P–T</i> pseudosections presented in Figure 7.9. Each isopleth marked pink represents the independently-calculated mode or composition of a given mineral.<b>Table S1.</b> Representative EPMA results for solid solution minerals. Major element oxide compositions are given in wt%. Calculated mineral modal proportions in vol%. End-member proportions and selected oxide compositions for solid-solution minerals.<b>Table S2.</b> Ti-in-quartz thermometry results. Ti (ppm) concentrations acquired using EPMA. Temperatures calculated using the calibration of Osborne et al. (2022).<b>Table S3.</b> Additional details for laser-ablation and ICP–MS instruments used in this study.<b>Table S4.</b> LA–ICP–MS/MS Lu–Hf isotope results for garnet. Major and trace-element data for a small selection of isotopes is provided. Data is also provided for primary reference material NIST-610, 'pseudo-primary' reference material Hogsbo, and secondary reference material Black Point.
DOI: 10.25909/25744134.v1
title: Supplemental Material: Targeted P–T modelling and in-situ garnet dating on polymetamorphic metapelite provides the first compelling evidence for Rodinian tectonism recorded in south-west Tasmania

description: <b>Supplementary material for Brown (2024), PhD thesis - Chapter 7 - </b><b>Targeted P–T modelling and in-situ garnet dating on polymetamorphic metapelite provides the first compelling evidence for Rodinian tectonism recorded in south-west Tasmania</b>Extended methods.<b>Figure S1.</b> Modelled mineral modal proportions and compositions for the <i>P–T</i> pseudosections presented in Figure 7.9. Each isopleth marked pink represents the independently-calculated mode or composition of a given mineral.<b>Table S1.</b> Representative EPMA results for solid solution minerals. Major element oxide compositions are given in wt%. Calculated mineral modal proportions in vol%. End-member proportions and selected oxide compositions for solid-solution minerals.<b>Table S2.</b> Ti-in-quartz thermometry results. Ti (ppm) concentrations acquired using EPMA. Temperatures calculated using the calibration of Osborne et al. (2022).<b>Table S3.</b> Additional details for laser-ablation and ICP–MS instruments used in this study.<b>Table S4.</b> LA–ICP–MS/MS Lu–Hf isotope results for garnet. Major and trace-element data for a small selection of isotopes is provided. Data is also provided for primary reference material NIST-610, 'pseudo-primary' reference material Hogsbo, and secondary reference material Black Point.
DOI: 10.25909/25745007
title: Data for: Mid-Holocene drying of K'gari lakes (subtropical eastern Australia) requires re-evaluation of El Niño-Southern Oscillation intensification and future drying risk

description: Data for: Mid-Holocene drying of K'gari lakes (subtropical eastern Australia) requires re-evaluation of El Niño-Southern Oscillation intensification and future drying risk. Journal of Quaternary Science<br>ABSTRACTThe Holocene history of Australia's climate is surprisingly poorly understood. This is, in part, because of the relatively weak forcing of Holocene climate versus that of the late Pleistocene. However, it is commonly suggested that eastern Australia dried during the mid‐ to late‐Holocene and that this was in response to increased activity in the El Niño–Southern Oscillation (ENSO), in particular, the intensification of the El Niño phase of ENSO. While this has been inferred from numerous locations, data from K'gari (a subtropical sand island adjacent to the east coast) was amongst the first used to develop this hypothesis and features heavily in the discussion of ENSO intensification. This study examines published and new data from three ≥4.5 m deep K'gari lakes that demonstrate a strong drying event during the middle Holocene (from 7640 to 5600 cal a BP), followed by a wetter late Holocene climate. This contrasts somewhat with previous arguments about K'gari's history that suggest a late Holocene drying. In turn, this indicates a need to re‐evaluate the notion that ENSO intensification drove late‐Holocene drying in the region. It also indicates that even large, deep lakes on K'gari, which are iconic landmarks with substantial cultural, ecological and economic values, are vulnerable to drying.
DOI: 10.25909/25745007.v1
title: Data for: Mid-Holocene drying of K'gari lakes (subtropical eastern Australia) requires re-evaluation of El Niño-Southern Oscillation intensification and future drying risk

description: Data for: Mid-Holocene drying of K'gari lakes (subtropical eastern Australia) requires re-evaluation of El Niño-Southern Oscillation intensification and future drying risk. Journal of Quaternary Science<br>ABSTRACTThe Holocene history of Australia's climate is surprisingly poorly understood. This is, in part, because of the relatively weak forcing of Holocene climate versus that of the late Pleistocene. However, it is commonly suggested that eastern Australia dried during the mid‐ to late‐Holocene and that this was in response to increased activity in the El Niño–Southern Oscillation (ENSO), in particular, the intensification of the El Niño phase of ENSO. While this has been inferred from numerous locations, data from K'gari (a subtropical sand island adjacent to the east coast) was amongst the first used to develop this hypothesis and features heavily in the discussion of ENSO intensification. This study examines published and new data from three ≥4.5 m deep K'gari lakes that demonstrate a strong drying event during the middle Holocene (from 7640 to 5600 cal a BP), followed by a wetter late Holocene climate. This contrasts somewhat with previous arguments about K'gari's history that suggest a late Holocene drying. In turn, this indicates a need to re‐evaluate the notion that ENSO intensification drove late‐Holocene drying in the region. It also indicates that even large, deep lakes on K'gari, which are iconic landmarks with substantial cultural, ecological and economic values, are vulnerable to drying.