cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/5c7f5d3723437
title: WA Northern Wheatbelt Bird Counts from Koobabbie 1987-2018

description: From the first week in May 1987 until the end of 2018, when they were on their property "Koobabbie" in the Northern Wheatbelt of WA, Alison and John Doley collected data on every species of bird they saw each week. Data were recorded on a booklet prepared by CSIRO Division of Wildlife and Rangelands Research for its 1987-1990 bird atlas (Saunders and Ingram 1995). This booklet provided a list of all species known to have occurred in the central wheatbelt and divided the year into 12 months and each month into four weeks; that is, each year had 48 weeks of potential observations. Any species seen on "Koobabbie" that was not listed on the booklet was added to the list. The Doleys also made extensive notes about their observations at the back of each year’s booklet. These notes, together with the raw presence data, comprise this data set. The data recorded each week consisted of a tick for every species seen that week. For example, one Red-capped Robin seen once during a week was recorded as a tick, as were 100 Galahs seen every day of that week.
DOI: 10.5517/ccdc.csd.cc21tjdt
title: CCDC 1901366: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Phillip R. Jefferies|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.2585366
title: Tuatara (Sphenodon punctatus) ab initio interspersed repeat consensus sequences from the Tuatara genome assembly.

description: These repeat consensus sequences are part of the genome analysis of the Tuatara genome.
description: Genome sequence/assembly is supported by Ngatiwai iwi, Allan Wilson Centre, University of Otago, New Zealand Genomics Limited, Illumina, National eScience Infrastructure (NeSI NZ). Repeat work supported by University of Adelaide, Uppsala University, South Australian Museum and Museum für Naturkunde Berlin.
DOI: 10.5281/zenodo.2585367
title: Tuatara (Sphenodon punctatus) ab initio interspersed repeat consensus sequences from the Tuatara genome assembly.

description: These repeat consensus sequences are part of the genome analysis of the Tuatara genome.
description: Genome sequence/assembly is supported by Ngatiwai iwi, Allan Wilson Centre, University of Otago, New Zealand Genomics Limited, Illumina, National eScience Infrastructure (NeSI NZ). Repeat work supported by University of Adelaide, Uppsala University, South Australian Museum and Museum für Naturkunde Berlin.
DOI: 10.17632/2ypkptm6mc.1
title: Data for: Price Discovery or Noise? The Role of Arbitrage and Speculation in Explaining Crude Oil Price Behaviour

description: The sample, which includes daily spot and futures prices of West Texas Intermediate (WTI) crude oil covering the period January 1988 to December 2015, is obtained from the Bloomberg database. Both spot and futures prices are measured as at the close of trading on the exchange. See attached file for more details
DOI: 10.17632/b6jpgj8gbv.1
title: Data for: A cross-sectional description of open access publication costs, policies and impact in emergency medicine and critical care journals

description: Dataset for the impact/ open access journal finder search engine
DOI: 10.17632/yd4hsrfnsw.1
title: Data for: Damage imaging of composite structures using multipath scattering Lamb waves

description: Files "cpchnorm_*.csv" are recorded from the pristine plate as the baseline signal. While files "cpchdama_*.csv" are captured after the simulated damage (i.e., added mass) is introduced. In these files, the first column is the sampling time, the second one is the original chirp excitation, and the third one is the Lamb wave response captured at the receiver (i.e., PZT). The 20 files at the same state are averaged to improve the signal-to-noise ratio, and the toneburst response is extracted from the averaged signal.
DOI: 10.6073/pasta/cd8b0f9e4d985a945135c60773c94fea
title: Lake water quality, chemistry and zooplankton composition for 16 lakes surrounding the Green Lakes Valley, 2016

description: This dataset contains water chemistry measurements made from 16 different lakes north and south of LTER site in the green lakes valley. At each visit water samples were collected for analysis of chlorophyll a and nutrient analysis and field measurements were recorded for pH, temperature, specific conductivity, dissolved oxygen (DO), % saturation, secchi depth, PAR. Secchi depth was measured using a 30cm disk to the nearest 0.25 meter and here recorded at the 0m row in the data file however it is a measurement of depth and so the units are meters. Most samples were collected between 0900 and 1300 MST. The first sampling date occurred shortly after lake had become ice free and then if the lake was at least 3 meters deep it was re-surveyed at approximately 2 week intervals. All data are collected from an inflatable raft at the point of deepest depth. All water samples were taken at the surface (0m), and the hypolimnion (about 2m above the lake sediment) using a Van Dorne sampler. Chlorophyll-a was extracted from water sample filters and absorbance was measured before and after acidification to quantify chlorophyll a concentration. Field measurements were conducted using a YSI either DO or multiple probe meter (YSI MPS 556) and a Li-Cor meter with a quantum sensor. Zooplankton samples were collected opportunistically 3 times throughout the summer, once immediately after ice-out and two more times with at least 14 days bewteen each subsequent visit. Zooplankton were sampled at the deepest location of each lake by pulling a conical net (Wisconsin net) vertically through the water column (i.e., vertical tow sample). The Wisconsin net is 0.9m long with an opening of an inner diameter of 0.2m and a mesh size of 80um. The vertical tow samples are taken from approximately 0.5 m off the lake bottom. After the net is raised and the sides rinsed, the sample is transferred to a 250 mL jar and preserved in a solution of 80% Ethanol. Jars are labeled with date (yyyy-mm-dd), time hh:mm (MST), lake, depth and net details and stored at room temperature until analysis.
DOI: 10.17632/h588k9bh24.1
title: Data for: Separate drivers for microbial C mineralization and physical protection of C

description: Datasets related to Cates et al., Separate drivers for microbial C mineralization and physical protection of C
DOI: 10.5281/zenodo.2582552
title: A multiple model high-resolution head-related impulse response database for aided and unaided ears (SOFA format)

description: The Multiple-Model High Resolution HRTF database is a collection of HRTFs measured using four different Head-and-Torso Simulators at high spatial resolution (2 degree azimuth and elevation). The data here is stored in SOFA format, with the data identical to the HDF5 files in doi:10.5281/zenodo.1226873.
DOI: 10.5281/zenodo.2582553
title: A multiple model high-resolution head-related impulse response database for aided and unaided ears (SOFA format)

description: The Multiple-Model High Resolution HRTF database is a collection of HRTFs measured using four different Head-and-Torso Simulators at high spatial resolution (2 degree azimuth and elevation).  The data here is stored in SOFA format, with the data identical to the HDF5 files in doi:10.5281/zenodo.1226873.
DOI: 10.17632/x8xbkx9fk8.1
title: Data for: Macroeconomic impact of the German energy transition and its distribution by sectors and regions

description: Supplementary information 2: Description of the regional economic extension to ISI-Macro
DOI: 10.17632/x95z3yj8d3.1
title: Data for: Macroeconomic impact of the German energy transition and its distribution by sectors and regions

description: Supplementary Information 1: Description of the macroeconomic simulation model ISI-Macro
DOI: 10.17632/3g95ns5rpj.2
title: Data for: Development and application of dairy-based sustainable livelihood security index in the districts of West Bengal, India: A tool for dairy development planning

description: District wise data base of 18 states of West Bengal on 17 indicators
DOI: 10.17632/52tt4dvrjy.1
title: Data for: A missing piece of the Papio puzzle: Gorongosa baboon phenostructure and intrageneric relationships

description: The sample comprises 363 cranial specimens (homologous three-dimensional [3D] landmark configurations representing the baboon craniofacial skeleton). The sample combines coordinate data obtained from two different sources: eight baboon skulls from Gorongosa National Park and a comparative sample of 355 baboon skulls from an earlier study conducted by Dunn et al. (2013). The eight baboon skulls from Gorongosa National Park were collected during the 2016 and 2017 fieldwork. The skulls were from naturally deceased and taphonomically-skeletonized individuals. The skulls were surface-scanned in three different views using a NextEngine Desktop 3D Scanner from NextEngine, Inc., operating with both laser and normal light. Each view was a 360º scan with 11 divisions. The geometric point resolution was set to 66 dots per inch (DPI). ScanStudio 2.0.2 software (NextEngine, Inc., 2006) was used to merge the view scans into a single-surface model. The surface models were imported into the Amira 5.5 software (Mercury Inc. USA). A set of 43 three-dimensional landmarks was digitized on each baboon craniofacial surface model. These 43 landmarks were selected from the configuration of landmarks used by Dunn et al. (2013). The comparative database corresponds to three hundred and fifty-five specimens with manually digitized coordinates from Dunn et al. (2013). In their database, specimens are grouped into one of the six commonly recognized species, with one subspecies identified for four individuals (P. ursinus griseipes). The database also included 318 geo-referenced specimens (274 geo-referenced specimens intersect with the 355 specimens labeled by species and sex). We subdivided P. cynocephalus into three subgroups by their geographic location: P. cynocephalus north (specimens located north of the Ruaha-Rufiji River in Central Tanzania; Zinner et al., 2015), P. cynocephalus south (specimens located south of the Ruaha-Rufiji River) and P. cynocephalus DRC (specimens located in the southern part of the Democratic Republic of Congo, labeled as P. cynocephalus Zaire in the database from Dunn et al. 2013), which is included in the distribution area of Kinda baboons. Two specimens labeled as P. ursinus and one specimen labeled as P. cynocephalus had geographic coordinates locating their origin in Gorongosa. Therefore, the specimens were divided into 10 groups, taking into account the six-species scheme, the subspecies P. ursinus griseipes, the mtDNA paraphyly of P. cynocephalus (grouping yellow baboons according to geographic location), and considering Gorongosa as an independent group.
DOI: 10.5281/zenodo.2585372
title: Experimentos realizados na proposta de tese de doutorado intitulada "Planejamento de Redes Ópticas Elásticas Orientado Para o Custo-Benefício"

description: Resultados e arquivos de configuração das simulações realizadas para a proposta de tese de doutorado intitulada "Planejamento de Redes Ópticas Elásticas Orientado Para o Custo-Benefício".
DOI: 10.5281/zenodo.2585373
title: Experimentos realizados na proposta de tese de doutorado intitulada "Planejamento de Redes Ópticas Elásticas Orientado Para o Custo-Benefício"

description: Resultados e arquivos de configuração das simulações realizadas para a proposta de tese de doutorado intitulada "Planejamento de Redes Ópticas Elásticas Orientado Para o Custo-Benefício".
DOI: 10.6073/pasta/10c60bac92b0f0b03d2c75b72229c27d
title: Precipitation data for A1 chart recorder, 1952 - 1964.

description: Precipitation data were collected from a ridgetop climate station east of Niwot Ridge (A1 at 2195 m) throughout the year using chart recorders. Initially, instrumentation consisted of an 8-inch metal rain gauge with the receiving rim about 3 feet above the ground and measurements were made on an approximately weekly basis. More recently, instrumentation consisted of a Fergusson-type weighing rain gauge. Precipitation was caught in a bucket containing ethylene glycol (to melt snow) and light oil (to prevent evaporation). As the weight of the bucket increased, the pen moved up via a spring mechanism and recorded on a rotating chart. Precipitation was recorded on a continuous basis.
DOI: 10.11578/1366719
title: Time dependent analysis of visible helium line-ratios for electron temperature and density diagnostic using synthetic simulations on NSTX-U

description: Helium line-ratios for electron temperature (Te) and density (ne) plasma diagnostic   in the Scrape-Off-Layer (SOL) and Edge regions of tokamaks are widely used.   Due to their intensities and proximity of wavelengths, the singlet 667.8 and 728.1   nm, and triplet 706.5 nm visible lines have been typically preferred. Time-   dependency of the triplet line (706.5 nm) has been previously analyzed in detail by   including transient effects on line-ratios during gas-puff diagnostic applications. In this work, several line-ratio combinations within each of the two spin systems are   analyzed with the purpose of eliminating transient effects to extend the application   of this powerful diagnostic to high temporal resolution characterization of   plasmas. The analysis is done using synthetic emission modeling and diagnostic   for low electron density NSTX SOL plasma conditions for several visible lines.   This analysis employs both quasi-static equilibrium and time-dependent models in   order to evaluate transient effects of the atomic population levels that may affect   the derived electron temperatures and densities as a helium gas-puff penetrates the   plasma. Ratios between the most intense lines are usually preferred due to their   higher signal to noise ratio. The analysis of a wider range of spectral lines will   help to extend this powerful diagnostic to experiments where the wavelength   range of the measured spectra may be constrained either by limitations of the   spectrometer, or by other conflicting lines from different ions.
DOI: 10.11578/1366742
title: Understanding the dynamics and energetics of magnetic reconnection in a laboratory plasma: Review of recent progress on selected fronts

description: Magnetic reconnection is a fundamental process at work in laboratory, space and astrophysical plasmas, in which magnetic field lines change their topology and convert magnetic energy to plasma particles by acceleration and heating. One of the most important problems in reconnection research has been to understand why reconnection occurs so much faster than predicted by MHD theory. Following the recent pedagogical review of this subject [M. Yamada, R. Kulsrud, and H. Ji, Rev. Mod. Phys. {\bf 82}, 603 (2010)], this paper presents a review of more recent discoveries and findings in the research of fast magnetic reconnection in laboratory, space, and astrophysical plasmas. In spite of the huge difference in physical scales, we find remarkable commonality between the characteristics of the magnetic reconnection in laboratory and space plasmas. In this paper, we will focus especially on the energy flow, a key feature of the reconnection process. In particular the experimental results on the energy conversion and partitioning in a laboratory reconnection layer [M. Yamada {\it et al.}, Nat. Commu. {\bf 5}, 4474 (2014)] are discussed and compared with quantitative estimates based on two-fluid analysis. In the Magnetic Reconnection Experiment (MRX), we find that energy deposition to electrons is localized near the X-point and is mostly from the electric field component perpendicular to the magnetic field. The mechanisms of ion acceleration and heating are also identified and a systematic and quantitative study on the inventory of converted energy within a reconnection layer with a well-defined but variable boundary. The measured energy partition in a reconnection region of similar effective size ($L \approx$ 3 ion skin depths) of the Earth's magneto-tail [J. Eastwood {\it et al.}, Phys. Rev. Lett. {\bf 110}, 225001 (2013)] is notably consistent with our laboratory results. Finally, to study the global aspects of magnetic reconnection, we have carried out a laboratory experiment on the stability criteria for solar flare eruptions, including {\textquotedblleft}storage and release{\textquotedblright} mechanisms of magnetic energy. We show that toroidal magnetic flux generated by magnetic relaxation (reconnection) processes generates a new stabilizing force which prevents plasma eruption. This result has lead us to discovery of a new stabilizing force for solar flares [C. E. Myers {\it et al.}, Nature {\bf 528}, 526 (2015)]
DOI: 10.11578/1366984
title: Quasi-static and dynamic magnetic tension forces in arched, line-tied magnetic flux ropes

description: Solar eruptions are often driven by magnetohydrodynamic instabilities such as the torus and kink instabilities that act on line-tied magnetic flux ropes. Recent laboratory experiments designed to study these eruptive instabilities have demonstrated the key role of both dynamic (Myers et al 2015 Nature 528, 526) and quasi-static (Myers et al 2016 Phys. Plasmas, in press) magnetic tension forces in contributing to the equilibrium and stability of line-tied magnetic flux ropes. In this paper, we synthesize these laboratory results and explore the relationship between the dynamic and quasi-static tension forces. While the quasi-static tension force is found to contribute to the flux rope equilibrium in a number of regimes, the dynamic tension force is substantial mostly in the so-called failed torus regime where magnetic self-organization events prevent the flux rope from erupting.
DOI: 10.11578/1366985
title: Observation of quasi-coherent edge fluctuations in Ohmic plasmas on NSTX

description: A quasi-coherent mode with frequency f = 40 kHz is observed in Ohmic plasmas in NSTX with the gas puff imaging diagnostic (GPI). This mode is located predominantly just inside the separatrix, with a maximum fluctuation amplitude similar to that of the broadband turbulence in the same frequency range. The quasi-coherent mode has a poloidal wavelength 16 cm and a poloidal velocity 49 km/s in the electron diamagnetic direction, which are similar to the characteristics expected from a linear drift-wave like mode in the edge.
DOI: 10.17632/wdfssmt9t7.1
title: Data for: From photograph to face-to-face: Brief interactions change person and personality judgments

description: Data set on person judgments before (from photographs) and after a brief interaction. See paper for more details
DOI: 10.20350/digitalcsic/8618
title: The influence of cover crops and tillage on water and sediment yield, and on nutrient, and organic matter losses in an olive orchard on a sandy loam soil

description: This is an dataset accompaning the paper "The influence of cover crops and tillage on water and sediment yield, and on nutrient, and organic matter losses in an olive orchard on a sandy loam soil". Soil & Tillage Research 106 (1): 137-144. It contains three files with: a) The plot layout. b) The bimonthly runoff, sediment and nutrient losses in runoff and sediment. c) The soil moisture data
DOI: 10.20350/digitalcsic/8619
title: Immature survival, fertility and density-dependence, drive global population dynamics in a long-lived bird

description: Disentangling the influence of demographic parameters and the role of density dependence on species’ population dynamics may be challenging, especially when there are fractions of the population that are unobservable (e.g. dispersers, non-breeders). Additionally, due to the difficulty of gathering data at large spatial scales, most studies ignore the global dynamic of a species, which would integrate heterogeneity in local dynamics and remove the noise of dispersal. We developed a global scale, integrated population model (IPM), to disentangle the main demographic drivers of population dynamics in a long-lived colonial seabird. We used 28 years of Audouin’s gull demographic data encompassing 69 local patches (90% of the world population). Importantly, we took into account the unobservable fraction of non-breeders and also assessed the strength of density dependence for this fraction of the population. As predicted by life histories of long-lived organisms, temporal random variation in survival was highest for immatures (), and lowest for adults (). Large temporal fluctuations in the probability of taking a sabbatical from reproduction would partly explain constancy in adult survival, adults probably refraining from breeding when environmental conditions were harsh. Thus, skipping breeding would be a bet hedging strategy for long-lived organisms having many reproductive chances during their lifespan. Immature survival and fertility were the main drivers of population dynamics during the study period (r2= 0.83 (0.77-0.87) and 0.73 (0.63-0.79) respectively). We found strong evidence of density dependence, not only due to the number of breeders (r2= -0.34 (-0.43 -0.24)) but also to that of sabbaticals (r2= -0.18 (-0.33 -0.01)). Even though population dynamics of long-lived organisms are very sensitive to changes in adult survival, we show here that in the absence of strong environmental perturbations affecting this life history trait, fluctuations in population density in those species may be driven by variations of immature survival and fertility. The species is showing a 5% of annual global decrease during the last ten years, and we propose an updated species conservation status. Integrated models based on long term monitoring at a global scale may enhance our ecological and evolutionary understanding of how demographic drivers influence population dynamics.
DOI: 10.20350/digitalcsic/8620
title: Comments on “Is soil erosion in olive groves as bad as often claimed?” by L. Fleskens and L. Stroosnijder

description: Complementary material, containing the raw data used in the Table and Figure included in this article.
DOI: 10.11578/1367078
title: Linear gyrokinetic simulations of microinstabilities within the pedestal region of H-mode NSTX discharges in a highly shaped geometry

description: Linear (local) gyrokinetic predictions of edge microinstabilities in highly shaped, lithiated and non-lihiated NSTX discharges are reported using the gyrokinetic code GS2. Microtearing modes dominate the non-lithiated pedestal top. The stabilization of these modes at the lithiated pedestal top enables the electron temperature pedestal to extend further inwards, as observed experimentally. Kinetic ballooning modes are found to be unstable mainly at the mid-pedestal of both types of discharges, with unstable trapped electron modes nearer the separatrix region. At electron wavelengths, ETG modes are found to be unstable from mid-pedestal outwards for eta(e,exp)~2.2, with higher growth rates for the lithiated discharge. Near the separatrix, the critical temperature gradient for driving ETG modes is reduced in the presence of lithium, reflecting the reduction of the lithiated density gradients observed experimentally. A preliminary linear study in the edge of non-lithiated discharges shows that the equilibrium shaping alters the electrostatic modes stability, found more unstable at high plasma shaping.