cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5173018
title: Taiwan Runoff and Teleconnection Indices

description: Data files are prepared for the article "Variations in the correlation between teleconnections and Taiwan’s streamflow" published in Hydrology and Earth System Sciences by Chia-Jeng Chen and Tsung-Yu Lee in 2017.<br>These files are:1. seasonal (July to September, JAS) streamflow data at 28 upstream (unit: cms) and 13 downstream (unit: km3) gauges in Taiwan, and2. 14 seasonal (JAS, AMJ, JFMAMJ, ONDJFMAMJ, JFM, ONDJFM, OND) teleconnection indices.<br>Feel free to contact the authors for more information.
DOI: 10.6084/m9.figshare.5173000
title: Supplementary Material for: Acute Radiological Abnormalities after Bronchial Thermoplasty: A Prospective Cohort Trial

description: <b><i>Background:</i></b> Bronchial thermoplasty (BT) is a novel treatment for severe asthma based on radiofrequency energy delivery to the larger airways. Although impressive radiological abnormalities have been reported, the incidence, pattern, and behavior over time of acute radiological abnormalities following BT are not well established. <b><i>Objective:</i></b> To assess the incidence pattern and behavior over time of acute radiological abnormalities following BT. <b><i>Methods:</i></b> This is a prospective, observational imaging study of severe asthma patients participating in the TASMA trial. Imaging of the lung (chest X-ray and/or computed tomography [CT]) was performed routinely before and directly after BT, within 6 weeks and at 6 months' follow-up. <b><i>Results:</i></b> Thirty-four chest X-rays were performed within &lt;5 h following 34 BT procedures in 12 patients. In 91% of cases, radiological abnormalities were seen, designated as peribronchial consolidations (97%) and/or atelectasis (29%). Ultra-low-dose (ULD) chest CTs were performed following 16 BT procedures showing abnormalities in all. Four different radiological patterns were identified: peribronchial consolidations with surrounding ground glass opacities (94%), atelectasis (38%), partial bronchial occlusions (63%), and bronchial dilatations (19%). No bronchoscopic intervention was needed. At 6 months' follow-up, in a single patient, high-resolution chest CT showed a focal bronchiectasis in a single airway. <b><i>Conclusions:</i></b> There is a high incidence of acute radiological abnormalities after BT. Four distinct radiological patterns can be identified on ULD chest CT, which resolve without clinical impact in virtually all cases.
DOI: 10.6084/m9.figshare.5173018.v1
title: Taiwan Runoff and Teleconnection Indices

description: Data files are prepared for the article "Variations in the correlation between teleconnections and Taiwan’s streamflow" published in Hydrology and Earth System Sciences by Chia-Jeng Chen and Tsung-Yu Lee in 2017.<br>These files are:1. seasonal (July to September, JAS) streamflow data at 28 upstream (unit: cms) and 13 downstream (unit: km3) gauges in Taiwan, and2. 14 seasonal (JAS, AMJ, JFMAMJ, ONDJFMAMJ, JFM, ONDJFM, OND) teleconnection indices.<br>Feel free to contact the authors for more information.
DOI: 10.6084/m9.figshare.5173000.v1
title: Supplementary Material for: Acute Radiological Abnormalities after Bronchial Thermoplasty: A Prospective Cohort Trial

description: <b><i>Background:</i></b> Bronchial thermoplasty (BT) is a novel treatment for severe asthma based on radiofrequency energy delivery to the larger airways. Although impressive radiological abnormalities have been reported, the incidence, pattern, and behavior over time of acute radiological abnormalities following BT are not well established. <b><i>Objective:</i></b> To assess the incidence pattern and behavior over time of acute radiological abnormalities following BT. <b><i>Methods:</i></b> This is a prospective, observational imaging study of severe asthma patients participating in the TASMA trial. Imaging of the lung (chest X-ray and/or computed tomography [CT]) was performed routinely before and directly after BT, within 6 weeks and at 6 months' follow-up. <b><i>Results:</i></b> Thirty-four chest X-rays were performed within &lt;5 h following 34 BT procedures in 12 patients. In 91% of cases, radiological abnormalities were seen, designated as peribronchial consolidations (97%) and/or atelectasis (29%). Ultra-low-dose (ULD) chest CTs were performed following 16 BT procedures showing abnormalities in all. Four different radiological patterns were identified: peribronchial consolidations with surrounding ground glass opacities (94%), atelectasis (38%), partial bronchial occlusions (63%), and bronchial dilatations (19%). No bronchoscopic intervention was needed. At 6 months' follow-up, in a single patient, high-resolution chest CT showed a focal bronchiectasis in a single airway. <b><i>Conclusions:</i></b> There is a high incidence of acute radiological abnormalities after BT. Four distinct radiological patterns can be identified on ULD chest CT, which resolve without clinical impact in virtually all cases.
DOI: 10.6084/m9.figshare.5172976
title: Supplementary Material for: The Role of Leisure Activities in Mediating the Relationship between Physical Health and Well-Being: Differential Patterns in Old and Very Old Age

description: <b><i>Background:</i></b> Recently, Paggi et al. [Gerontology 2016;62:450-458] for the very first time showed in a cross-sectional sample of 259 adults aged 18-81 years that the relation of physical health to psychological well-being was mediated via frequency of leisure activity participation. <b><i>Objective:</i></b> To extend this framework, we followed theories on successful aging and vulnerability to propose to add a differential perspective predicting that certain individuals may be more vulnerable than others and therefore may show differences in the mediation pattern. Specifically, we examined whether mediation patterns were differential in certain populations, such as in old-old (compared to young-old) adults and in individuals who carried out a low (compared to those with a high) number of activities. <b><i>Methods:</i></b> We analyzed data from 3,080 individuals on physical health (number of chronic diseases, subjective health status, and subjective evaluation of change in health over the last 10 years), frequency of participation in 18 leisure activities, and physical and psychological well-being using moderated mediation models with a path model approach that allowed the simultaneous estimation of all model paths, including their significance. <b><i>Results:</i></b> We found that the relation of physical health to physical and psychological well-being was mediated via frequency of activity participation. For physical (but not for psychological) well-being, this mediation was more pronounced in old-old (compared to young-old) adults and in individuals who carried out a low (compared to those with a high) number of activities. These moderated mediations were attributable to differential relations of physical health to frequency of activity participation and to differential relations of frequency of activity participation to physical well-being between the investigated moderator levels. <b><i>Conclusion:</i></b> Present data suggest that participation in leisure activities may play a key role in mediating the relationship between physical health and well-being, particularly in very old age. Findings are discussed with respect to theories of successful aging and differences between physical and psychological well-being.
DOI: 10.6084/m9.figshare.5172991
title: Supplementary Material for: High-Performance Membrane Dialyzers and Mortality in Hemodialysis Patients: A 2-Year Cohort Study from the Annual Survey of the Japanese Renal Data Registry

description: <b><i>Background:</i></b> Little information is available regarding the type of dialyzer which results in good prognosis. This study is aimed at investigating the association between 7 types of dialyzers and 2-year mortality. <b><i>Methods:</i></b> We conducted a cohort study using data from a nationwide registry of the Japanese Society for Dialysis Therapy. Subjects were 136,676 patients on maintenance hemodialysis (HD) between 2009 and 2011 who underwent maintenance HD for at least 2 years and were treated with one of the following 7 types of high-performance membrane dialyzers: cellulose triacetate (CTA), ethylene vinyl alcohol (EVAL), polyacrylonitrile (PAN), polyester polymer alloy (PEPA), polyethersulfone (PES), polymethylmethacrylate (PMMA), and polysulfone (PS). Cox regression was used to estimate the association between baseline dialyzers and all-cause 2-year mortality, adjusting for potential confounders. <b><i>Results:</i></b> Data were adjusted using basic factors, with PS as a reference group, and the hazard ratio (HR) was significantly higher in CTA, PMMA, PAN, and EVAL groups. Further data adjustment for Kt/V yielded the same results as were obtained from data adjusted for basic factors. After further adjustment for nutrition- and inflammation-related factors, HR was significantly lowered for the PES and PMMA groups compared with the PS group (HR 0.88; 95% CI 0.82-0.94 and HR 0.84 95% CI 0.76-0.93, respectively). After propensity score matching, HR for the PES and PMMA groups was significantly lowered compared with the PS group. <b><i>Conclusions:</i></b> The use of different membrane types may affect mortality. Further long-term prospective studies are needed to clarify whether the PES and PMMA membranes can improve prognosis.
DOI: 10.6084/m9.figshare.5172994
title: pain_variability_data.zip

description: time series used in the papaer<br>
DOI: 10.6084/m9.figshare.5172976.v1
title: Supplementary Material for: The Role of Leisure Activities in Mediating the Relationship between Physical Health and Well-Being: Differential Patterns in Old and Very Old Age

description: <b><i>Background:</i></b> Recently, Paggi et al. [Gerontology 2016;62:450-458] for the very first time showed in a cross-sectional sample of 259 adults aged 18-81 years that the relation of physical health to psychological well-being was mediated via frequency of leisure activity participation. <b><i>Objective:</i></b> To extend this framework, we followed theories on successful aging and vulnerability to propose to add a differential perspective predicting that certain individuals may be more vulnerable than others and therefore may show differences in the mediation pattern. Specifically, we examined whether mediation patterns were differential in certain populations, such as in old-old (compared to young-old) adults and in individuals who carried out a low (compared to those with a high) number of activities. <b><i>Methods:</i></b> We analyzed data from 3,080 individuals on physical health (number of chronic diseases, subjective health status, and subjective evaluation of change in health over the last 10 years), frequency of participation in 18 leisure activities, and physical and psychological well-being using moderated mediation models with a path model approach that allowed the simultaneous estimation of all model paths, including their significance. <b><i>Results:</i></b> We found that the relation of physical health to physical and psychological well-being was mediated via frequency of activity participation. For physical (but not for psychological) well-being, this mediation was more pronounced in old-old (compared to young-old) adults and in individuals who carried out a low (compared to those with a high) number of activities. These moderated mediations were attributable to differential relations of physical health to frequency of activity participation and to differential relations of frequency of activity participation to physical well-being between the investigated moderator levels. <b><i>Conclusion:</i></b> Present data suggest that participation in leisure activities may play a key role in mediating the relationship between physical health and well-being, particularly in very old age. Findings are discussed with respect to theories of successful aging and differences between physical and psychological well-being.
DOI: 10.6084/m9.figshare.5172994.v1
title: pain_variability_data.zip

description: time series used in the papaer<br>
DOI: 10.6084/m9.figshare.5172508
title: S1 Data.

description: <b>S1 Data. Files 1, 2, and 3: Case data aggregated to neighborhood level with neighborhood characteristics.</b> All cases were mapped to the neighborhood level. <b>Folder A in S1 Data. Shape files.</b> Shapefiles were used to define the neighborhoods. <b>Folder B in S1 Data. Geodatabase of shapefiles. </b>Neighborhood characteristic. DOI: 10.6084/m9.figshare.5172508<b></b> <b> </b><b></b>
DOI: 10.6084/m9.figshare.5172508.v2
title: Folders A, B, C, and D in S4 Data. Shape files. Shapefiles were used to define the neighborhoods, communas, rivers, health centers, and urban boundaries.

description: <b>Folders A and files 1, 2, and 3 in S1 Data. Case data aggregated to neighborhood level.</b> All cases were mapped to the neighborhood level. <b>Folders B in S1 Data. Shape files.</b> Shapefiles were used to define the neighborhoods, communas, rivers, health centers, and urban boundaries. <b></b>
DOI: 10.6084/m9.figshare.5172478
title: Ultraconserved elements (UCEs) resolve the phylogeny of Australasian smurf-weevils

description: Alignments of final UCE loci in "Ultraconserved elements (UCEs) resolve the phylogeny of Australasian smurf-weevils" 2017, contains phylips for 368 loci
DOI: 10.6084/m9.figshare.5172508.v3
title: Folders A, B, C, and D in S4 Data. Shape files. Shapefiles were used to define the neighborhoods, communas, rivers, health centers, and urban boundaries.

description: <b>Folders A and files 1, 2, and 3 in S1 Data. Case data aggregated to neighborhood level.</b> All cases were mapped to the neighborhood level. <b>Folders B in S1 Data. Shape files.</b> Shapefiles were used to define the neighborhoods, communas, rivers, health centers, and urban boundaries. <b></b>
DOI: 10.6084/m9.figshare.5172508.v4
title: Folders A, B, C, and D in S4 Data. Shape files. Shapefiles were used to define the neighborhoods, communas, rivers, health centers, and urban boundaries.

description: <b>S1 Data. F</b><b>iles 1, 2, and 3: </b><b>Case data aggregated to neighborhood level with neighborhood characteristics.</b> All cases were mapped to the neighborhood level. <b>Folder A in S1 Data. Shape files.</b> Shapefiles were used to define the neighborhoods. <b>Folder B. Geodatabase of shapefiles. </b>Neighborhood characteristic.<b></b>
DOI: 10.6084/m9.figshare.5172508.v5
title: Neighborhood level data for zika, chikungunya, and dengue in Cali, Colombia

description: <b>S1 Data. Files 1, 2, and 3: Case data aggregated to neighborhood level with neighborhood characteristics.</b> All cases were mapped to the neighborhood level. <b>Folder A in S1 Data. Shape files.</b> Shapefiles were used to define the neighborhoods. <b>Folder B. Geodatabase of shapefiles. </b>Neighborhood characteristic. DOI: 10.6084/m9.figshare.5172508<b></b><b></b>
DOI: 10.6084/m9.figshare.5172508.v6
title: Neighborhood level data for zika, chikungunya, and dengue in Cali, Colombia

description: <b>S1 Data. Folder A in S1 Data. Shape files.</b> Shapefiles were used to define the neighborhoods. <b>Folder B. Geodatabase of shapefiles. </b>Neighborhood characteristic. <b>Folder C. Files 1 (Zika), 2 (Dengue), and 3 (Chikungunya): Case data aggregated to neighborhood level with neighborhood characteristics.</b> All cases were mapped to the neighborhood level. DOI: 10.6084/m9.figshare.5172508<b></b><b></b>
DOI: 10.6084/m9.figshare.5172340
title: Modification of anti-tumor immunity by tolerogenic dendritic cells

description: Immunosuppressive functions of glucocorticoids (GC) can be mediated via various mechanisms, including the modulation of dendritic cells (DC). Our study investigates the effects of tolerogenic GC-treated DCs on NK and T cell anti-tumor responses in OT-1/Rag<sup>−/−</sup> mice, expressing a transgenic TCR in CD8<sup>+</sup> T cells. The effects caused by GC-treated DCs were compared to the responses to immunogenic, CpG-activated DCs. The effects of DCs on anti-tumor immune responses were analyzed using the EG7 tumor model, where the tumor cells express the peptide epitope recognized by OT-1 T cells. We observed that immunization with CpG and peptide-treated DCs protected against tumor growth by activation of NK cell response. Also, immunogenic DCs induced the expansion of cytotoxic CD8<sup>+</sup>OT-1 cells, expressing activation markers CD44 and CD69 and producing IFNγ. In contrast, the peptide and GC-treated DCs in OT-1 mice increased the numbers of immature Mac-1<sup>+</sup>CD27<sup>−</sup> NK cells as well as Foxp3<sup>+</sup> and IL-10 secreting CD8<sup>+</sup>OT-1 cells with suppressive properties. We conclude that the generation of tolerogenic DCs is one of many immunosuppressive mechanisms that can be induced by GC. Our study demonstrated that tolerogenic DCs modify anti-tumor immune response by suppressing NK cell activity and stimulating the formation of IL-10-secreting CD8<sup>+</sup> Tregs.
DOI: 10.6084/m9.figshare.5172340.v1
title: Modification of anti-tumor immunity by tolerogenic dendritic cells

description: Immunosuppressive functions of glucocorticoids (GC) can be mediated via various mechanisms, including the modulation of dendritic cells (DC). Our study investigates the effects of tolerogenic GC-treated DCs on NK and T cell anti-tumor responses in OT-1/Rag<sup>−/−</sup> mice, expressing a transgenic TCR in CD8<sup>+</sup> T cells. The effects caused by GC-treated DCs were compared to the responses to immunogenic, CpG-activated DCs. The effects of DCs on anti-tumor immune responses were analyzed using the EG7 tumor model, where the tumor cells express the peptide epitope recognized by OT-1 T cells. We observed that immunization with CpG and peptide-treated DCs protected against tumor growth by activation of NK cell response. Also, immunogenic DCs induced the expansion of cytotoxic CD8<sup>+</sup>OT-1 cells, expressing activation markers CD44 and CD69 and producing IFNγ. In contrast, the peptide and GC-treated DCs in OT-1 mice increased the numbers of immature Mac-1<sup>+</sup>CD27<sup>−</sup> NK cells as well as Foxp3<sup>+</sup> and IL-10 secreting CD8<sup>+</sup>OT-1 cells with suppressive properties. We conclude that the generation of tolerogenic DCs is one of many immunosuppressive mechanisms that can be induced by GC. Our study demonstrated that tolerogenic DCs modify anti-tumor immune response by suppressing NK cell activity and stimulating the formation of IL-10-secreting CD8<sup>+</sup> Tregs.
DOI: 10.6084/m9.figshare.5172331
title: CUADRO ANALISIS EMPLAZAMIENTO VIDEOCLIP

description: Cuadro descriptivo de análisis del artículo
DOI: 10.6084/m9.figshare.5172331.v1
title: CUADRO ANALISIS EMPLAZAMIENTO VIDEOCLIP

description: Cuadro descriptivo de análisis del artículo
DOI: 10.6084/m9.figshare.5172310.v1
title: Data from "Integrative modeling of gene and genome evolution roots the archaeal tree of life" (PNAS)

description: Various datafiles underlying the analyses in this PNAS paper: http://www.pnas.org/content/114/23/E4602.abstract; the doi is doi: 10.1073/pnas.1618463114.
DOI: 10.6084/m9.figshare.5172010
title: PLOS ONE - Innovative Thinking

description: Raw data for the PLOS One publication.Aurora, Helios and Zenith files for the published run.Python script for the organization of the life cycle simulation.Excel file for data access
DOI: 10.6084/m9.figshare.5172046
title: data.xlsx

description: Data for publication PLOS one 2017<br><br>Survival analysis of conservative vs. dialysis treatment of elderly patients with CKD stage 5<br>
DOI: 10.6084/m9.figshare.5172010.v1
title: PLOS ONE - Innovative Thinking

description: Raw data for the PLOS One publication.Aurora, Helios and Zenith files for the published run.Python script for the organization of the life cycle simulation.Excel file for data access
DOI: 10.6084/m9.figshare.5172073.v1
title: RNA samples OWB 2017.xlsx

description: RNAseq reads from total RNA isolated from wheat leaves infected with Magnaporthe oryzae pv. triticum<br>
DOI: 10.6084/m9.figshare.5171920
title: Supplemental Data from Synchronous population dynamics in California butterflies explained by climatic forcing

description: Includes data used for analyses reported in this manuscript
DOI: 10.6084/m9.figshare.5171920.v1
title: Supplemental Data from Synchronous population dynamics in California butterflies explained by climatic forcing

description: Includes data used for analyses reported in this manuscript
DOI: 10.6084/m9.figshare.5171899
title: Investigating the shape memory properties of 4D printed polylactic acid (PLA) and the concept of 4D printing onto nylon fabrics for the creation of smart textiles

description: 3D printing is an ever growing industry that provides many benefits to the advanced manufacturing and design industry. However, parts tend to be static, rigid, and lack multi-purpose use. Recently, a new technology has emerged that uses 3D printing to print parts with the ability to change shape over time when exposed to different external stimuli. This new technology has been called 4D printing. Creation of a new material that is capable of changing shape when exposed to different stimuli and possess the ability to be 3D printed can be a difficult and a long process. Due to this strenuous process, the potential of a common fused deposition modelling material, poly(lactic) acid (PLA), for use in 4D printing is investigated and the concept of combining PLA with nylon fabric for the creation of smart textiles is explored. PLA possesses thermal shape memory behaviour and maintains these abilities when combined with nylon fabric that can be thermomechanically trained into temporary shapes and return to their permanent shapes when heated.
DOI: 10.6084/m9.figshare.5171899.v1
title: Investigating the shape memory properties of 4D printed polylactic acid (PLA) and the concept of 4D printing onto nylon fabrics for the creation of smart textiles

description: 3D printing is an ever growing industry that provides many benefits to the advanced manufacturing and design industry. However, parts tend to be static, rigid, and lack multi-purpose use. Recently, a new technology has emerged that uses 3D printing to print parts with the ability to change shape over time when exposed to different external stimuli. This new technology has been called 4D printing. Creation of a new material that is capable of changing shape when exposed to different stimuli and possess the ability to be 3D printed can be a difficult and a long process. Due to this strenuous process, the potential of a common fused deposition modelling material, poly(lactic) acid (PLA), for use in 4D printing is investigated and the concept of combining PLA with nylon fabric for the creation of smart textiles is explored. PLA possesses thermal shape memory behaviour and maintains these abilities when combined with nylon fabric that can be thermomechanically trained into temporary shapes and return to their permanent shapes when heated.
DOI: 10.17045/sthlmuni.5171860
title: Sharing is easy, right? - Stockholm University services for research data and the conundrum of sharing

description: This is the slides and the speaking manuscript of a presentation given at the event Figshare fest in Amsterdam, Netherlands on June 28th 2017. The presentation is meant to show a case study of organizing research data management in a university both from the management and user perspectives.<br>The presentation describes how the Stockholm University Library team is currently (June 2017) working to manage research data at Stockholm University across different administrative departments. The presentation also includes an overview of the current research data management activities at the Stockholm University with a deeper insight on working with a knowledge hub for research data management based on user feedback.<br>