cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/6rkw48wspj.1
title: ImmunoAIzer: A deep-learning-based computational framework to characterize cell distribution and gene mutation in tumor microenvironment. Chang Bian et al.

description: This dataset contains the original unprocessed H&E and mIHC image slides of the paper:"ImmunoAIzer: A deep-learning-based computational framework to characterize cell distribution and gene mutation in tumor microenvironment". The original data of the paper contains 8 H&E WSIs and their corresponding mIHC WSIs. The slides are stored in qptiff format, which can be viewed by phenochart software or any other WSI viewing softwares. Because the original file size is about 30GB after compressing and the available storage of mendeley data project is 10GB, we only uploaded the H&E WSI and its corresponding mIHC WSI of 1 tissue sample. The whole original dataset can be accessed by reasonable request.
DOI: 10.17632/kmxdxhjvcz.1
title: Data deposition

description: Original data deposition for the manuscript entitled "The role of voltage-gated chloride channels in the epileptogenesis of temporal lobe epilepsy".
DOI: 10.17632/svxv8ytg9h.1
title: Essential data for reproducing figures and tables in "Shear velocity structure beneath the central United States from the inversion of Rayleigh wave phase velocities"

description: A three-dimensional shear velocity model for the crust and upper mantle beneath the central United States is presented by inverting Rayleigh wave phase velocities from 20s to 100s periods. These phase velocities were determined using regional and teleseismic earthquakes recorded by the Northern Embayment Lithospheric Experiment stations, the CERI New Madrid Seismic Network, the Earthscope Transportable Array, and the Ozark Illinois INdiana Kentucky Flexible Array. A low Vs anomaly is imaged in the mantle below the Reelfoot Rift, which is the uppermost portion of three connected low-velocity areas dipping toward the northeast and extend to the Illinois Basin. According to the analysis in previous tomographic studies using both Vp and Vs anomalies, the elevation of temperature and the enrichment of iron, water, and orthopyroxene contents are required factors to explain the reduced seismic velocities. These low-velocity anomalies are produced by silica-rich fluids rising from the stalled Farallon slab. Two low-Vs areas are imaged below the Ste. Genevieve Seismic Zone and the Wabash Valley Seismic Zone. These areas are weak zones and are responsible for stress concentration and thus the generation of intraplate seismicity.
DOI: 10.17632/9hnz6c99py.2
title: Stability and biocompatibility of a Bionic Eye - Ophthalmoscopy, intraocular pressure, optical coherence tomography and radiography data

description: Data related to: Implantation and long-term assessment of the stability and biocompatibility of a novel 98 channel suprachoroidal visual prosthesis in sheep In Eggenberger et al., nine sheep of the Suffolk (N=2) and Dorper (N=7) breeds were implanted in the left eye with a suprachoroidal retinal stimulator (Bionic Eye) for durations up to 100 days. The surgical safety, implant stability and device biocompatibility were assessed. All procedures were performed conducted in accordance with the Australian Code for the Care and Use of Animals for Experimental Purposes 8th edition (2013) and the ARVO standards for use of animals in ophthalmic research and approved by the Animal Care and Ethics Committee (ACEC) of UNSW Sydney (protocol number 14/155B) . Animal identifier: Animals were identified according to the experimental group to which they were assigned (duration of experiment 2 days, 1 month, 2 months and 3 months. E.g.: 2D#1 was the first animal in the group implanted for a duration of 2 Days. 3M#3 was the third animal in the group implanted for 3 Months. Fundus and infrared imaging: Indirect ophthalmoscopy and infrared images were acquired as video files from which still frames were extracted using VLC Media Player software (Free Software Foundation, Inc., Boston, USA). Intraocular pressure: A TonoVet rebound tonometer (Icare Oy, Helsinki, Finland) was used to measure the intraocular pressure at different times before and after implantation of the Bionic Eye. Optical Coherence Tomography: OCT imaging was performed with an Envisu 2300 system (BiOptigen, Morrisvile NC, USA) and images acquired in the group implanted for a duration of 3 months.
DOI: 10.17632/fkrf3v8kgv.3
title: Jie Qiu

description: Raw data for the paper "Electrochemical study of the dissolution of oxide films grown on Type 316L stainless steel in molten fluoride salt"
DOI: 10.17632/p2vyrmghyz.14
title: Dr Odysseas Kopsidas

description: BscEconomics Bsc Civil Engineering LLB Law Msc Industrial Management and Technology Msc Law and Economics PhD Industrial Management and Technology PhD Environmental Economics
DOI: 10.17632/hxbtv2w2wz.1
title: Assessment of irrigation water productivity in Mkoba Scheme in Midlands Province and Silalatshani Scheme in Matebeleland South Province, Zimbabwe

description: Field measurements were done to quantify amount of irrigation water being applied. Data on yields harvested, amount of water being received from reservoir(s) and planting times was gathered from records of farmers and Departments of Irrigation and Agricultural Extension Services (AGRITEX). Average climatic conditions and crop water requirements were estimated using CLIMWAT 2.0 and CROPWAT 8.0. Data analysis was done using equations as well as Microsoft excel and Statistical Package for Social Sciences (SPSS) version 23 to produce tabulations, descriptions and graphs. Substantial water losses, in both Mkoba Irrigation Scheme and Silalatshani Irrigation Scheme due to the dilapidated irrigation infrastructure, were noted. Maize crop productivity was low, ranging below 50% of the national expected yield of 10-13 tonnes/ha. The collected data further indicated that physical water productivity for maize, beans and wheat was 1.1 kg/m3, 0.54 kg/m3 and 0.87 kg/m3 respectively in Mkoba Irrigation Scheme. Mkoba Irrigation Scheme had higher physical water productivity compared to Silalatshani Irrigation Scheme which had 0.35 kg/m3 for maize, 0.28 kg/m3 for beans and 0.45 kg/m3 for wheat. This suggests that shortages of water under gravity-fed smallholder irrigation increases water productivity as farmers would be conserving it more compared to a situation where the water would be in full supply. In Silalatshani Irrigation Scheme, the economic water productivity for maize was US$0.13/m3, US$0.42/m3 for beans and US$0.23/m3 for wheat. Water productivity was low in both irrigation schemes given the physical water productivity range of 0.3 – 2.0 kg/m3 for maize.
DOI: 10.17632/vcw6ypphmp.1
title: Dataset on suicide time-series structural change analysis in Portugal (1913-2018)

description: We present 10 tables with different, related data. Table 1 is the result of an extensive narrative literature review depicting published national secular suicide trends extending by at least a century. Table 2 pinpoints all reforms in the statistical national system by year, period and political regimen since 1886. In Table 3, we relate different consecutive versions of international classification of diseases and causes of death, by year of international approval and periodic implementation in the national statistical system, also by period of political regimen, depicting periods when different data was made accessible (sex, age), when categories of causes of external death begun to be collected (total external, suicide, accidents, undetermined), and types of dates were apt to be estimated (eg., crude death rates, age-standardised death rates, age-specific death rates); Table 3 also shows a cumulative index of years and attributes bibliographic primary sources for each line of data since 1886. Table 4 presents economic cycles – recession, stagnation, expansion –, in Portugal, by year, political regimen, with indicated sources, since 1886. Tables 5 to 9 present yearly raw numbers, crude death rates of suicide, accidents, and undetermined deaths, by sex, since 1886 for suicide and 1971 for accidents and undetermined deaths; and age-standardised death rates for the population aged more than 15 years old, by sex, since 1913 for suicide, and 1971 both for accidents and undetermined deaths. Table 10 lists the reference sources for mortality primary data and nosology changes by yearly periods. Finally, Figures shows structural changes and breakpoints, from 1913-2018, by sex and group of cause of death, taking general mortality as a gold standard.
DOI: 10.6084/m9.figshare.14454003
title: Supplementary Material for: Vascular Patterning as Integrative Readout of Complex Molecular and Physiological Signaling by VESsel GENeration Analysis

description: The molecular signaling cascades that regulate angiogene?sis and microvascular remodeling are fundamental to nor?mal development, healthy physiology, and pathologies such as inflammation and cancer. Yet quantifying such complex, fractally branching vascular patterns remains difficult. We re?view application of NASA’s globally available, freely down?loadable VESsel GENeration (VESGEN) Analysis software to numerous examples of 2D vascular trees, networks, and tree-network composites. Upon input of a binary vascular image, automated output includes informative vascular maps and quantification of parameters such as tortuosity, fractal dimension, vessel diameter, area, length, number, and branch point. Previous research has demonstrated that cytokines and therapeutics such as vascular endothelial growth factor, basic fibroblast growth factor (fibroblast growth factor-2), transforming growth factor-beta-1, and steroid triamcinolone acetonide specify unique “fingerprint” or “biomarker” vascular patterns that integrate dominant signaling with physiological response. In vivo experimental examples described here include vascular response to kera?tinocyte growth factor, a novel vessel tortuosity factor; an?giogenic inhibition in humanized tumor xenografts by the anti-angiogenesis drug leronlimab; intestinal vascular in?flammation with probiotic protection by Saccharomyces boulardii, and a workflow programming of vascular architec?ture for 3D bioprinting of regenerative tissues from 2D im?ages. Microvascular remodeling in the human retina is de?scribed for astronaut risks in microgravity, vessel tortuosity in diabetic retinopathy, and venous occlusive disease.
DOI: 10.6084/m9.figshare.14454003.v1
title: Supplementary Material for: Vascular Patterning as Integrative Readout of Complex Molecular and Physiological Signaling by VESsel GENeration Analysis

description: The molecular signaling cascades that regulate angiogene?sis and microvascular remodeling are fundamental to nor?mal development, healthy physiology, and pathologies such as inflammation and cancer. Yet quantifying such complex, fractally branching vascular patterns remains difficult. We re?view application of NASA’s globally available, freely down?loadable VESsel GENeration (VESGEN) Analysis software to numerous examples of 2D vascular trees, networks, and tree-network composites. Upon input of a binary vascular image, automated output includes informative vascular maps and quantification of parameters such as tortuosity, fractal dimension, vessel diameter, area, length, number, and branch point. Previous research has demonstrated that cytokines and therapeutics such as vascular endothelial growth factor, basic fibroblast growth factor (fibroblast growth factor-2), transforming growth factor-beta-1, and steroid triamcinolone acetonide specify unique “fingerprint” or “biomarker” vascular patterns that integrate dominant signaling with physiological response. In vivo experimental examples described here include vascular response to kera?tinocyte growth factor, a novel vessel tortuosity factor; an?giogenic inhibition in humanized tumor xenografts by the anti-angiogenesis drug leronlimab; intestinal vascular in?flammation with probiotic protection by Saccharomyces boulardii, and a workflow programming of vascular architec?ture for 3D bioprinting of regenerative tissues from 2D im?ages. Microvascular remodeling in the human retina is de?scribed for astronaut risks in microgravity, vessel tortuosity in diabetic retinopathy, and venous occlusive disease.
DOI: 10.17632/vww9xhts79.3
title: K voprosu ob izuchenii semantiki dialektov

description: Sovremennye dialekty – rezul'tat mnogovekovogo razvitiya. Ispanskij yazyk yavlyaetsya prodolzheniem i dal'nejshim razvitiem narodnoj latyni, privnesennoj na Pirenejskij poluostrov rimlyanami vo vremya vtoroj Punicheskoj vojny (218-201 gg. do n.e.) i zamenivshej narechiya avtohtonnogo naseleniya – iberov. Ispanskij yazyk raspadaetsya na 2 osnovnye gruppy dialektov: severnuyu, podrazdelyayushchuyusya na leono-asturijskij i aragonskij dialekty, i yuzhnuyu, sostoyashchuyu iz andalusijskogo, mursijskogo i dialekta Estremadury (extremeño). V stranah Latinskoj Ameriki takzhe imeetsya mnogo territorial'nyh dialektov. Specificheskie cherty ispanskogo yazyka Latinskoj Ameriki otnosyatsya, glavnym obrazom, k sferam leksiki i proiznosheniya.
DOI: 10.17632/p5tsv2wpmg.3
title: smFISH data of IEG expression in the dorsal striatum after acute, repeated, and challenge cocaine exposures
DOI: 10.17632/jd8y573s4r.1
title: Data on bond strength of resin cement systems to CAD/CAM resin composite after aging

description: The manufacturer’s recommended primer was applied to the CAD/CAM resin composite. They were bonded using three different types resin cements. Half of all the specimens were tested immediately following 24 hours of immersion in water at 37°C, and half were subjected to thermocycling 10,000 cycles following 24 hours of immersion in water. The tensile test was used to determine the bond strength in MPa. The fracture surface and mode between resin cement and CAD/CAM resin composite were determined by naked eye and scanning electron microscope observation.
DOI: 10.17632/f9p96z597v.1
title: Primate NB stimulation by Qi et al

description: Data and MATLAB code related to primate Nucleus Basalis of Meynert stimulation in combination with PFC recordings.
DOI: 10.17632/xd8bn5tktw.1
title: Thermal Warining

description: Please use matlab to load。 The data of temperature prediction are in the surface temperature prediction folder, where ts_model_12000.mat is the prediction result of electric heating model, ts_lstm_12000.mat is the prediction result of LSTM prediction network, and ts_boost_10000.mat is the prediction result of DMAN model. The data of thermal warning are in the Multi-step Thermal Warning folder,where X and Y represent input and output respectively, and Train, Test and Pred represent training, test and prediction respectively.
DOI: 10.17632/wk5z9xz348.1
title: Strike-slip fault damage zone samples: Jorgillo Fault filtered μ-CT and segmented volumes

description: This data repository contains the filtered and segmented μ-CT volumes used in the work done by: Gomila et al. (2021). Quantitative anisotropies of palaeopermeability in a strike-slip fault damage zone: Insights from micro-CT analysis and numerical simulations. Tectonophysics. https://doi.org/10.1016/j.tecto.2021.228873.
DOI: 10.17632/46x6vx5r4z.1
title: BMCRN_DN_TJ-Datafile8

description: Size distribution of total RNA
DOI: 10.17632/5rptvch5z2.1
title: Customer segmentation

description: Customer segmentation refers to the mobility of the Swiss resident population in the submarkets (1) leisure travel for everyday purposes, (2) day trips with private purposes and (3) trips with overnight stays with private purposes. There is a focus on trips and travel by rail. This study categorises trips connected to a multi-local lifestyle – where people regularly visit, for example, vacation homes or apartments, relatives or friends, or partners living in a different location – as leisure traffic or travel in this study because they occur for private, non-commercial reasons and can involve considerable annual traffic. Trips for business purposes have been excluded because they feature different work-related reasons and require separate customer segmentation.
DOI: 10.21227/gxpd-d998
title: Pig data for 2D-3D intensity-based registration

description: A new workflow is proposed to update the intraoperative electron radiotherapy (IOERT) planning refreshing the position and orientation (pose) of a virtual applicator with respect to the preoperative computed tomography (CT) with the actual pose during surgery. The workflow proposed relies on a robust registration of the preoperative CT and intraoperative projection radiographs acquired with a C-arm system. The workflow initially performs a geometric calibration of the C-arm using fiducials placed on the applicator. In the next step, a point-based 2D-3D registration based on fiducials positioned on the patient's skin is performed, followed by an intensity-based registration that refines the point-based registration result. The performance of the workflow has been evaluated using a realistic physical phantom consisting of a pig lower limb and its corresponding CT and 7 C-arm projections at different poses. The accuracy has been measured with respect to the applicator origin and axis before and after the registration refinement process. A feasibility study with human data is also included. Error analysis revealed angular accuracy of 0.9 ± 0.7 degrees and translational accuracy of 1.9 ± 1 mm. Our experiments demonstrated that the proposed workflow can achieve subdegree angular accuracy in locating the applicator with respect to the preoperative CT to update and supervise the IOERT planning right before radiation delivery. The proposed workflow could be easily implementable in a routine, corresponding to a significant improvement in quality assurance during IOERT procedures.
DOI: 10.17632/3kpn7w49xv.1
title: BMCRN_DN_TJ-Datafile9

description: Size distribution of total RNA
DOI: 10.17632/rd6k8b5xz4.1
title: BMCRN_DN_TJ-Datafile11

description: Scatterplots showing correlation of signal values between cancer and non-cancer breast tissues.
DOI: 10.17632/w6p4bkhz25.1
title: BMCRN_DN_TJ-Datafile12

description: Normalised signal values
DOI: 10.17632/rzg7tvkg2r.1
title: BMCRN_DN_TJ-Datafile10

description: Box plots of the signals from the microarray
DOI: 10.17632/sjnv6y4gkz.2
title: WEKA-CoDaPack-iNZight

description: All the figures and excel files for the book
DOI: 10.17632/9t595rjgsv.1
title: BMCRN_DN_TJ-Datafile7

description: Clinical features
DOI: 10.17632/3fyrzd87wx.2
title: Data for: Analogous computations in working memory input, output and motor gating: Electrophysiological and computational modeling evidence

description: clean and epoched EEG data used for the EEG analyses. Raw behavior data
DOI: 10.17632/92jk3fchm2.1
title: This Person Does Not Exist CLIP classification
DOI: 10.17632/rprx2k946t.1
title: Figures and table of Electrochemical behavior of an aluminum alloy 2024-T3 exposed to bacteria obtained from Thailand’s environment

description: The published document is related to results obtained from Microbiologically Influence Bacteria characterized by LSV and polarized EIS.
DOI: 10.17632/9mjg54kcwv.4
title: Datset for Internal structure of Beck’s Hopelessness Scale: Analyzing method effects using the CT-C(M–1) model

description: The factor structure of the Beck Hopelessness Scale (BHS) has long been a topic of debate in psychometrics. Recently, studies have examined the method factor’s role in the factor structure of the BHS, but the models used to study the method’s effect have severe limitations and new models are needed. One such model is the correlated trait–correlated methods minus one (CT-C(M-1)), a powerful modeling approach that gives the trait factor an unambiguous meaning and avoids anomalous results associated with fully symmetrical bifactor modeling. The present work compares the fit of the CT-C(M-1) model to that of the models proposed in the previous literature to verify the convergent validity of the CT-C(M-1) model and its discriminatory capacity by taking suicidal ideation as the criterion variable. This study used a large and heterogeneous open-mode online sample of Argentinian people (N = 2,164). The results indicated that the CT-C(M-1) model with positive words as referenced items achieves the best fit. The factorial scores derived from this model demonstrate good predictive and discriminating capabilities.
DOI: 10.17632/48y8tkf5wh.4
title: Data for Internal Structure of the Cognitive Emotion Regulation Questionnaire (CERQ): CFA and ESEM Analysis in a Large Argentinean Sample.

description: The aim of this research is to compare the fit of a CFA model and a set-ESEM model in the CERQ.
DOI: 10.17632/x7zvm2xphn.3
title: Personal monitoring data and interview results regarding dosimeters worn by medical workers in Japan

description: Misuse (inappropriate positioning) of personal dosimeters by health professionals leads to erroneous readings. This dataset include information on 670 pairs of the dose equivalent Hp(10) readings of medical workers at the Hiroshima University Hospital and the positions of the dosimeters used for monitoring. The data are presented in “Original_readings_included_interviews.xlsx.”
DOI: 10.17632/rjgtbhsnfc.4
title: Datset for A Modern Network Approach to Revisiting the Positive and Negative Affective Schedule (PANAS) Construct Validity

description: The main objective of the present study was to advance the knowledge regarding the factor structure underlying the PANAS scores by utilizing the different functionalities of the EGA method. Despite the widespread use of this instrument (Heubeck & Wilkinson, 2019), there is controversy regarding its factor structure. In light of this, EGA was used to: (1) estimate the dimensionality of the PANAS scores, (2) establish the stability of the dimensionality estimate and of the item assignments into the dimensions, and (3) assess the impact of potential redundancies across item pairs on the dimensionality and structure of the PANAS scores. This assessment was carried out across two studies that included two large samples of participants that varied across a wide range of ages and that included persons in treatment for psychological disorders. In order to reduce the possibility of capitalization on chance, the sample for Study 1 was split into two halves as recommended in the literature (Anderson & Gerbing, 1988), with the first half used to derive the optimal structure for the PANAS using EGA and exploratory structural equation modeling (ESEM; Asparouhov & Muthén, 2009), and the second half used to cross-validate it with EGA, ESEM and confirmatory factor analysis (CFA; Jöreskog, 1969). The sample for Study 2 was then employed to confirm the dimensionality and latent structure of the PANAS scores using both EGA and CFA. Additionally, the measurement invariance of the PANAS factor structure across sex, age, and treatment status was assessed in Study2 for both samples, as well as the reliability of the confirmed scales. Overall, these analyses aimed to offer more clarity to the lingering debate regarding the optimal factorial structure for the PANAS scores and to provide a framework that other researchers can use for scale validation of the scores of this or other instruments.