cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8201469
title: Sarcopenia index predicts short-term prognosis of head and neck squamous cell carcinoma

description: Dataset of "Sarcopenia index predicts short-term prognosis of head and neck squamous cell carcinoma"
DOI: 10.5281/zenodo.7647870
title: Anonymized data for paper "RepeatNPR: Improving Neural Program Repair using Program Dependence Analysis and Filter Mechanism" submitted to ICSE 2024

description: The project includes the dataset and source code used in the submitted ICSE 2024 paper titled "RepeatNPR: Improving Neural Program Repair using Program Dependence Analysis and Filter Mechanism"
DOI: 10.5281/zenodo.7647869
title: Anonymized data for paper "RepeatNPR: Improving Neural Program Repair using Program Dependence Analysis and Filter Mechanism" submitted to ICSE 2024

description: The project includes the dataset and source code used in the submitted ICSE 2024 paper titled "RepeatNPR: Improving Neural Program Repair using Program Dependence Analysis and Filter Mechanism"
DOI: 10.6084/m9.figshare.23244500.v1
title: Expanding the microcolonial black fungi <em>Aeminiaceae</em> family: <em>Saxumspirale</em> gen. nov. and <em>Saxumspirale lemni</em>, sp. nov. (<em>Capnodiales</em>), isolated from deteriorated Limestone Walls of a Forgotten Monument in the Central Region of Portugal

description: <em>Saxumspirale lemni</em>, sp. nov. (Aeminiaceae, <em>Capnodiales</em>) phylogenetic data
DOI: 10.6084/m9.figshare.23812074
title: 20230801_starrydata2

description: All data on Starrydata2, a database of experimental properties in the field of inorganic materials
DOI: 10.6084/m9.figshare.23812074.v1
title: 20230801_starrydata2

description: All data on Starrydata2, a database of experimental properties in the field of inorganic materials
DOI: 10.6084/m9.figshare.23513478.v1
title: <strong>An Australian Alien Flora Standardised System (AAFSS) to facilitate management and decision making on biological invasions and biosecurity</strong>

description: Biological invasions are a major threat to Australia. Information on alien flora in Australia is contributed independently from different jurisdictions, which has led to inconsistencies at the national level, hampering efficient management. To harmonise different information sources, we introduce an Australian Alien Flora Standardised System (AAFSS). The AAFSS includes an R script that compares existing data sources (the Australian Plant Census and state and territory censuses), identifies mismatches among them and, following a detailed prioritisation method, combines the information into a standardised system at the national scale. The derived product is a national system for tracking alien flora in Australia that can aid early warning and prevention of introduced species, facilitate decision-making at national and other jurisdictional levels, and biosecurity at national scale. The system is freely available, easy to use, and ready to be implemented with updated versions of any of the datasets, saving future efforts by keeping track of alien flora across Australia. Individuals who use these data for publication may cite the data paper associated with it: <strong>An Australian Alien Flora Standardised System (AAFSS) to facilitate management and decision making on biological invasions and biosecurity</strong> Martín-Forés, I., Guerin, G.R., Lewis, D., Gallagher, R.V., Vilà, M., Catford, J.A., Pauchard, A. & Sparrow, B.
DOI: 10.25345/c5tt4g40b
title: MassIVE MSV000092562 - HB-EGF-loaded nanovesicles enhance trophectodermal spheroid attachment and invasion
title: The ability of trophectodermal cells (outer layer of the embryo) to attach to the endometrial cells and subsequently invade the underlying matrix are critical stages of embryo implantation during successful pregnancy establishment. Extracellular vesicles (EVs) have been implicated in embryo-maternal crosstalk, that reprogram endometrial cells towards a pro-implantation signature and phenotype. However, challenges associated with EV yield and direct loading of biomolecules limits their therapeutic potential. We have previously established generation of cell-derived nanovesicles (NVs) from human trophectodermal cells (hTSCs) and their capacity to reprogram endometrial cells to enhance adhesion and blastocyst outgrowth. Here, we developed a rapid NV loading strategy to encapsulate potent implantation molecules such as HB-EGF (NVHBEGF). We show these loaded NVs upon uptake to low-receptive endometrial HEC1A cells elicit EGFR-downstream pathways and enhance target cell attachment and invasion in an EGF-signalling dependent manner. This phosphoproteomics and proteomics approach reveals that NVHBEGF regulate short-term signalling (e.g., ERBB/EGFR signalling) and long-term reprogramming capabilities on endometrial cells, and demonstrate their functional regulation on trophectodermal-endometrial interactions and trophectodermal invasion. This proof-of-concept study demonstrate feasibility in enhancing the potency of NVs in the context of embryo attachment and establishment.
DOI: 10.5281/zenodo.8201529
title: Anonymized data for paper "Automatic Bug Fixing in the Era of Large Language Models: Interactive Simulation of Programmer Behavior" submitted to ICSE 2024

description: The project includes the BFP benchmark used in the submitted ICSE 2024 paper titled "Automatic Bug Fixing in the Era of Large Language Models: Interactive Simulation of Programmer Behavior"
DOI: 10.5281/zenodo.8201528
title: Anonymized data for paper "Automatic Bug Fixing in the Era of Large Language Models: Interactive Simulation of Programmer Behavior" submitted to ICSE 2024

description: The project includes the BFP benchmark used in the submitted ICSE 2024 paper titled "Automatic Bug Fixing in the Era of Large Language Models: Interactive Simulation of Programmer Behavior"
DOI: 10.5281/zenodo.8200819
title: Performance Analysis of LoRa in Indoor Settings: A Data Descriptor

description: This work is a description of the experiment conducted to understand the reception<br> of LoRa in closed environments, such as a building.<br> The experiment was carried out on 04/05/2023, in the NW1 building of University of<br> Bremen. The data’s primary goal is to provide researchers with the understanding of<br> factors such as distance, obstacles, interference with other wireless devices that<br> dictates LoRa’s performance.
DOI: 10.5281/zenodo.8200820
title: Performance Analysis of LoRa in Indoor Settings: A Data Descriptor

description: This work is a description of the experiment conducted to understand the reception<br> of LoRa in closed environments, such as a building.<br> The experiment was carried out on 04/05/2023, in the NW1 building of University of<br> Bremen. The data’s primary goal is to provide researchers with the understanding of<br> factors such as distance, obstacles, interference with other wireless devices that<br> dictates LoRa’s performance.
DOI: 10.5281/zenodo.8201530
title: Performance Analysis of LoRa in Indoor Settings: A Data Descriptor

description: This work is a description of the experiment conducted to understand the reception<br> of LoRa in closed environments, such as a building.<br> The experiment was carried out on 04/05/2023, in the NW1 building of University of<br> Bremen. The data’s primary goal is to provide researchers with the understanding of<br> factors such as distance, obstacles, interference with other wireless devices that<br> dictates LoRa’s performance.
DOI: 10.6084/m9.figshare.23812095.v1
title: SI_dataset

description: Data from:<br>Influence of wildfire on downstream transport of dissolved carbon, nutrients, and mercury in the permafrost zone of Boreal western CanadaUnder review<br>
DOI: 10.6084/m9.figshare.23808174
title: A chromosome-scale and haplotype-resolved genome assembly of carnation (Dianthus caryophyllus 'Aili')

description: <i>Dianthus caryophyllus</i> is an economic species often considered excellent cut flowers and is suitable for bouquets and gardens. Here, we assembled the haplotype-resolved genome of <i>D. caryophyllus</i> ‘Aili’ at the chromosome level for the first time. The total lengths of the two assembled haplotypes of carnation were 584.88 Mb for haplotype genome 1 (hap1) and 578.78 Mb for haplotype genome 2 (hap2), respectively. We predicted a total of 44,098 and 42,425 protein-coding genes, respectively.
DOI: 10.6084/m9.figshare.23808174.v2
title: A chromosome-scale and haplotype-resolved genome assembly of carnation (Dianthus caryophyllus "Aili")

description: <i>Dianthus caryophyllus</i> is an economic species often considered excellent cut flowers and is suitable for bouquets and gardens. Here, we assembled the haplotype-resolved genome of <i>D. caryophyllus</i> ‘Aili’ at the chromosome level for the first time. The total lengths of the two assembled haplotypes of carnation were 584.88 Mb for haplotype genome 1 (hap1) and 578.78 Mb for haplotype genome 2 (hap2), respectively. We predicted a total of 44,098 and 42,425 protein-coding genes, respectively.
DOI: 10.57967/hf/0945
title: PetraAI
DOI: 10.6084/m9.figshare.23812122
title: Xiao et al. functional training on FMS

description: agility, endurance, speed, flexibility, injury risk, adolescent
DOI: 10.34740/kaggle/dsv/6223844
title: ne-nepali-female
DOI: 10.5439/1985470
title: TRACER UAS CU RAAVEN Flight Data

description: This dataset includes observations collected using the University of Colorado RAAVEN small Uncrewed Aircraft System (sUAS) during the TRACER Intensive Operations Period. These observations include flights conducted at two primary locations, including an area near the Brazoria National Wildlife Refuge and the University of Houston Coastal Center. Flights were conducted for approximately two weeks per month between June and the end of September, and include two primary flight modes. The first mode is a spiraling profile between the surface and 600 m above ground level, and the second mode includes flight conducted in a series of stepped altitudes between 600 and 20 m above ground level.
DOI: 10.5439/1992777
title: 180varanal3druc (c1)

description: 180varanal3druc
DOI: 10.5439/1992778
title: 180varanal3dmerra (c1)

description: 180varanal3dmerra
DOI: 10.5439/1992779
title: 180varanal3djra55 (c1)

description: 180varanal3djra55
DOI: 10.5439/1992780
title: bbhrpavg1mlawer (c1)

description: bbhrpavg1mlawer
DOI: 10.5439/1992781
title: bbhrp1mlawer1 (c1)

description: bbhrp1mlawer1
DOI: 10.5439/1992782
title: microbaseen (c1)

description: microbaseen
DOI: 10.15473/1992946
title: Tidal Currents in San Juan Archipelago, Washington

description: Re-analyzed acoustic Doppler current profiler (ADCP) data originally collected by NOAA CO-OPS (Center for Operational Oceanographic Products and Services) and equivalent point data from Pacific Northwest National Laboratory's FVCOM (Finite Volume Community Ocean Model) model of the region. Data are processed to products describing characteristics of tidal currents relevant to tidal turbines, as well as power output estimates for a notional turbine deployed from a surface platform or from the seabed at each location. These data underpin the results presented in their associated paper - see below.
DOI: 10.34740/kaggle/dsv/6228143
title: Influential factors COVID-19 vaccination uptake
DOI: 10.6084/m9.figshare.23806206.v1
title: Data.zip

description: <b>DOM, bacteria, and fungi data</b> under changes in temperature and soil moisture
DOI: 10.6084/m9.figshare.21608259
title: Geodynamic controls on the Paleo-Asian plate evolution: Constraints from Paleozoic intrusive suites along the northern margin of the North China Craton

description: Zircon U-Pb dating and Hf isotopic analyses were performed at the Mineral Laser Microprobe Analysis Laboratory, China University of Geosciences, Beijing (CUGB). Zircon U-Pb analyses were obtained with a laser ablation-inductively coupled plasma mass spectrometry (LA-ICP-MS). Detailed descriptions of the analytical methods are provided by Zhang et al. (2019). Data off-line processing was performed following Andersen (2002), Ludwig (2003), and Liu et al. (2010). Zircon Hf isotopic compositions were undertaken on the dated zircons using a multi-collector-inductively coupled plasma-mass spectrometer (MC-ICP-MS), coupled with a NewWave 193UC excimer laser ablation system. The instrumental conditions and analytical methods are described by Xu et al. (2019). Whole-rock major elements were conducted using X-ray fluorescence spectrometer in the Institute of Geology and Geophysics, Chinese Academy of Sciences. Trace element analyses were undertaken with a high-resolution inductively coupled plasma mass spectrometry at the State Key Laboratory of Geological Processes and Mineral Resources (Radiogenic Isotope Geochemistry-RIG lab), CUGB. Analyses of reference standards, including BHVO-2, AGV-2 and GPS-2, indicate that the analytical accuracy is better than 5% for most elements. Whole-rock Sr-Nd isotopic compositions were determined using a Neptune Plus MC-ICP-MS in the RIG lab, CUGB. The analytical procedures are similar to those followed by Li et al. (2022). Instrumental mass fractionation was normalized using 86Sr/88Sr = 0.1194 and 146Nd/144Nd = 0.7219, respectively. The average measured 86Sr/88Sr ratio of the SRM987 standard and 143Nd/144Nd ratio of the Alfa Nd standard during the analytical campaign were 0.710246 ± 14 (2SD, n=15) and 0.512420 ± 14 (2SD, n=15), respectively.
DOI: 10.6084/m9.figshare.21608259.v2
title: Geodynamic controls on the Paleo-Asian plate evolution: Constraints from Paleozoic intrusive suites along the northern margin of the North China Craton

description: Zircon U-Pb dating and Hf isotopic analyses were performed at the Mineral Laser Microprobe Analysis Laboratory, China University of Geosciences, Beijing (CUGB). Zircon U-Pb analyses were obtained with a laser ablation-inductively coupled plasma mass spectrometry (LA-ICP-MS). Detailed descriptions of the analytical methods are provided by Zhang et al. (2019). Data off-line processing was performed following Andersen (2002), Ludwig (2003), and Liu et al. (2010). Zircon Hf isotopic compositions were undertaken on the dated zircons using a multi-collector-inductively coupled plasma-mass spectrometer (MC-ICP-MS), coupled with a NewWave 193UC excimer laser ablation system. The instrumental conditions and analytical methods are described by Xu et al. (2019). Whole-rock major elements were conducted using X-ray fluorescence spectrometer in the Institute of Geology and Geophysics, Chinese Academy of Sciences. Trace element analyses were undertaken with a high-resolution inductively coupled plasma mass spectrometry at the State Key Laboratory of Geological Processes and Mineral Resources (Radiogenic Isotope Geochemistry-RIG lab), CUGB. Analyses of reference standards, including BHVO-2, AGV-2 and GPS-2, indicate that the analytical accuracy is better than 5% for most elements. Whole-rock Sr-Nd isotopic compositions were determined using a Neptune Plus MC-ICP-MS in the RIG lab, CUGB. The analytical procedures are similar to those followed by Li et al. (2022). Instrumental mass fractionation was normalized using 86Sr/88Sr = 0.1194 and 146Nd/144Nd = 0.7219, respectively. The average measured 86Sr/88Sr ratio of the SRM987 standard and 143Nd/144Nd ratio of the Alfa Nd standard during the analytical campaign were 0.710246 ± 14 (2SD, n=15) and 0.512420 ± 14 (2SD, n=15), respectively.
DOI: 10.6084/m9.figshare.21608259.v1
title: Geodynamic controls on the Paleo-Asian plate evolution: Constraints from Paleozoic magmatism along the northern margin of the North China Craton

description: Zircon U-Pb dating and Hf isotopic analyses were performed at the Mineral Laser Microprobe Analysis Laboratory, China University of Geosciences, Beijing (CUGB). Zircon U-Pb analyses were obtained with a laser ablation-inductively coupled plasma mass spectrometry (LA-ICP-MS). Detailed descriptions of the analytical methods are provided by Zhang et al. (2019). Data off-line processing was performed following Andersen (2002), Ludwig (2003), and Liu et al. (2010). Zircon Hf isotopic compositions were undertaken on the dated zircons using a multi-collector-inductively coupled plasma-mass spectrometer (MC-ICP-MS), coupled with a NewWave 193UC excimer laser ablation system. The instrumental conditions and analytical methods are described by Xu et al. (2019). Whole-rock major elements were conducted using X-ray fluorescence spectrometer in the Institute of Geology and Geophysics, Chinese Academy of Sciences. Trace element analyses were undertaken with a high-resolution inductively coupled plasma mass spectrometry at the State Key Laboratory of Geological Processes and Mineral Resources (Radiogenic Isotope Geochemistry-RIG lab), CUGB. Analyses of reference standards, including BHVO-2, AGV-2 and GPS-2, indicate that the analytical accuracy is better than 5% for most elements. Whole-rock Sr-Nd isotopic compositions were determined using a Neptune Plus MC-ICP-MS in the RIG lab, CUGB. The analytical procedures are similar to those followed by Li et al. (2022). Instrumental mass fractionation was normalized using 86Sr/88Sr = 0.1194 and 146Nd/144Nd = 0.7219, respectively. The average measured 86Sr/88Sr ratio of the SRM987 standard and 143Nd/144Nd ratio of the Alfa Nd standard during the analytical campaign were 0.710246 ± 14 (2SD, n=15) and 0.512420 ± 14 (2SD, n=15), respectively.
DOI: 10.6084/m9.figshare.23806206.v2
title: Data.zip

description: <b>Data: </b>DOM, bacteria, and fungi data under changes in temperature and soil moisture.<b>Data2: </b> carbon dioxide tracer molecules and the transformation DOM components.
DOI: 10.6084/m9.figshare.23650686
title: Siberian frog transcriptomes

description: Transcriptomes of the Siberian frog exposed to hypoxia.
DOI: 10.6084/m9.figshare.23650686.v1
title: Siberian frog transcriptomes

description: Transcriptomes of the Siberian frog exposed to hypoxia.
DOI: 10.6084/m9.figshare.23650686.v2
title: Siberian frog transcriptomes

description: Transcriptomes of the Siberian frog exposed to hypoxia.
DOI: 10.6084/m9.figshare.23812260
title: Supplementary materials.zipSupplementary materials

description: Figure S1. Total ion chromatograms of LC-MS/MS-based metabolomics analyses of water-phase metabolites (A, C) and organic-phase lipids (B, D) in ESI+ and ESI- modes, respectively. Table S1. Water-phase metabolites detected in ORs. Table S2. Organic-phase metabolites detected in ORs. Table S3. Water-phase metabolites detected in the plasma samples of rats+OR and rats-OR. Table S4. Organic-phase metabolites detected in the plasma samples of rats+OR and rats-OR. Table S5. Differential metabolites found in the plasma samples of rats+OR and rats-OR. Table S6. Proteins detected in the plasma samples rats+OR and rats-OR. Table S7. Differential proteins found in the plasma samples of rats+OR and rats-OR. Table S8. Quantification and characterization of all genes measured in rats+OR and rats-OR. Table S9. Differential expressed genes found in the blood cells of rats+OR and rats-OR.
DOI: 10.6084/m9.figshare.23812260.v1
title: Supplementary materials.zipSupplementary materials

description: Figure S1. Total ion chromatograms of LC-MS/MS-based metabolomics analyses of water-phase metabolites (A, C) and organic-phase lipids (B, D) in ESI+ and ESI- modes, respectively. Table S1. Water-phase metabolites detected in ORs. Table S2. Organic-phase metabolites detected in ORs. Table S3. Water-phase metabolites detected in the plasma samples of rats+OR and rats-OR. Table S4. Organic-phase metabolites detected in the plasma samples of rats+OR and rats-OR. Table S5. Differential metabolites found in the plasma samples of rats+OR and rats-OR. Table S6. Proteins detected in the plasma samples rats+OR and rats-OR. Table S7. Differential proteins found in the plasma samples of rats+OR and rats-OR. Table S8. Quantification and characterization of all genes measured in rats+OR and rats-OR. Table S9. Differential expressed genes found in the blood cells of rats+OR and rats-OR.
DOI: 10.6084/m9.figshare.23812278
title: Health and lifestyles survey

description: release 5.4.1
DOI: 10.3886/e189901
title: Public Comment Data for the 2023 Case for the Middle Eastern and North African Checkbox in the United States

description: The Office of Management and Budget (OMB) is reviewing current minimum standards for collecting race/ethnicity data on federal forms. This review is extremely important for Middle Eastern and North African (MENA) Americans, who have been overlooked and unable to receive federal funding for their communities for decades. MENA individuals are defined as “White”, which is particularly concerning given that research continues to identify that their health and lived experiences differ from Whites. From January to April 2023, the OMB requested public comments on a separate MENA checkbox. The purpose of this research was to describe public comments regarding the addition of the MENA checkbox on the US Census and other federal forms. <br><br>A public comment period outlining changes to the collection of race/ethnicity data on the US Census and other federal forms opened in January 2023. Public comments were reviewed to determine whether MENA was mentioned, whether comments supported a MENA checkbox, and whether comments mentioned acceptance for health-related reasons. Results: There were 6,700 comments reviewed. Most (73.88%) mentioned adding a MENA checkbox. Of those, 99.31% accepted adding the checkbox. Among the comments that accepted adding a MENA checkbox, 29.09% mentioned health, 44.75% mentioned linguistic/language services, and 44.75% mentioned education-related reasons. <br><br>The data associated with these results are provided in a STATA (.dta) file.
DOI: 10.3886/e189901v1
title: Public Comment Data for the 2023 Case for the Middle Eastern and North African Checkbox in the United States

description: A public comment period outlining changes to the collection of race and ethnicity data on the US Census and other federal forms opened in January 2023. The purpose of this project is to collect and manage public comments in relation to the Office of Management and Budget (OMB) Statistical Policy Directive 15 proposals regarding the addition of a separate Middle Eastern and North African (MENA) checkbox on the US Census and other required federal forms. Public comments posted in February and March 2023 were reviewed to determine whether MENA was mentioned, whether comments supported a MENA checkbox, and whether comments mentioned support for health-related reasons. <br><br>During the first review of comments, there were 3,062 comments reviewed. Most (71.49%) mentioned adding a MENA checkbox. Of those, 98.86% supported adding a MENA checkbox. Among those, 31.98% mentioned adding a MENA checkbox for health-related reasons. These results have been submitted for publication and are currently under peer review (see citation for pre-print below).<br><br>Data collection and review of comments is ongoing. As of April 25, 2023, there were 3,355 comments reviewed posted from February 1 though March 6, 2023. Of those, 72.10% mention the addition of the MENA checkbox. Of those, 98.97% supported adding a MENA checkbox. Among those, 31.38% mentioned adding a MENA checkbox for health-related reasons. For this analysis, we also looked at mentions of adding the MENA checkbox for language or linguistic services. Of the comments that supported adding the checkbox, 55.25% of the comments mentioned the need for a MENA checkbox for services to be provided for language and linguistic services.<br><br>The data provided is a STATA (.dta) file.