cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6085/aa/isasxx_xxxitbpxmsr01_20210914.50.1
title: MARINe/PISCO: Intertidal: site temperature data: Saddlebag South East, Washington (ISASXX)

description: This metadata record describes a mix of intertidal seawater and air temperature data collected at Saddlebag South East, Washington by MARINe/PISCO. Measurements were collected using HOBO Temperature/Light Data Logger (Onset Computer Corp. UA-002-64) beginning 2021-09-22. Site temperature loggers are bolted down in a wire cage at various locations within each site. Mussel growth temperature loggers are bolted down in a wire cage at high, mid, or low positions within a mussel bed. Temperature is recorded at 10 or 15 minute intervals.
DOI: 10.6085/aa/isasxx_xxxitbpxmsr01_20210914.40.1
title: (:unkn)
DOI: 10.6084/m9.figshare.22192297
title: flx_data.csv

description: Dataset and codes for the manuscript: <strong>Psychoactive pollution has sex-specific effects on behavioural individuality and plasticity in fish</strong>
DOI: 10.6084/m9.figshare.22192297.v1
title: flx_data.csv

description: Dataset and codes for the manuscript: <strong>Psychoactive pollution has sex-specific effects on behavioural individuality and plasticity in fish</strong>
DOI: 10.6084/m9.figshare.22144838
title: Fuel Subsidy Restructure Effectiveness

description: Fuel Subsidy Restructure for B40 and M40 in Malaysia
DOI: 10.6084/m9.figshare.22144838.v1
title: Fuel Subsidy Restructure Effectiveness

description: Fuel Subsidy Restructure for B40 and M40 in Malaysia
DOI: 10.34740/kaggle/dsv/5085237
title: NBA DATASET
DOI: 10.6084/m9.figshare.22192930
title: Cattle Traffic impact on Sclerocactus wrightiae.xlsx

description: Data set examining impacts of cattle traffic on reproductive fitness (as examined through flower quantity, flower abortion, and seed production) of Sclerocactus wrightiae.
DOI: 10.6084/m9.figshare.22192930.v1
title: Cattle Traffic impact on Sclerocactus wrightiae.xlsx

description: Data set examining impacts of cattle traffic on reproductive fitness (as examined through flower quantity, flower abortion, and seed production) of Sclerocactus wrightiae.
DOI: 10.6084/m9.figshare.19726855
title: Accretion of an early Paleozoic Alaska-type arc on the northern North China: Implications for continental growth of the Central Asian Orogenic Belt

description: Three tables including the original data of whole-rock major and trace elements, zircon U-Pb isotopic and Lu-Hf isotopic compositions for samples in this study.
DOI: 10.6084/m9.figshare.19726855.v2
title: Accretion of an early Paleozoic Alaska-type arc on the northern North China: Implications for continental growth of the Central Asian Orogenic Belt

description: Three tables including the original data of whole-rock major and trace elements, zircon U-Pb isotopic and Lu-Hf isotopic compositions for samples in this study.
DOI: 10.6084/m9.figshare.19726855.v1
title: Accretion of an early Paleozoic Alaska-type arc on the northern North China: Implications for continental growth of the Central Asian Orogenic Belt

description: Three tables including the original data of whole-rock major and trace elements, zircon U-Pb isotopic and Lu-Hf isotopic compositions for samples in this study.
DOI: 10.48577/jpl.0rzgb3
title: A Piecewise C2 Basis for Function Representation Over The Surface of a sphere

description: Computational algorithms for bicubic spline functions
DOI: 10.5281/zenodo.7651678
title: Model output for analyses in Qian et al. (2023) "Region and cloud regime dependences of parametric sensitivity in E3SM Atmosphere Model".

description: This archive contains post-processed data for analyses in Qian et al. (2023) "<strong>Region and cloud regime dependences of parametric sensitivity in E3SM Atmosphere Model</strong>". These data are model output from the Perturbed Parameters Ensemble (PPE) simulations conducted with DOE's E3SM Atmosphere Model Version 1 (EAMv1). There are 256x12 PPE simulations with each simulation run for 5 days following the approach of Cloud Associated Parameterization Testbed (CAPT) and transpose Atmosphere Model Intercomparison Project (AMIP) paradigm. The diagnostic variables associated with the parameterizations of turbulence and shallow convection, deep convection, cloud microphysics, and gravity wave drag at day 5 are saved and used for analyses in this paper.
description: This research was supported as part of the Energy Exascale Earth System Model (E3SM) project, funded by the U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research Earth System Modeling program.
DOI: 10.5281/zenodo.7651679
title: Model output for analyses in Qian et al. (2023) "Region and cloud regime dependences of parametric sensitivity in E3SM Atmosphere Model".

description: This archive contains post-processed data for analyses in Qian et al. (2023) "<strong>Region and cloud regime dependences of parametric sensitivity in E3SM Atmosphere Model</strong>". These data are model output from the Perturbed Parameters Ensemble (PPE) simulations conducted with DOE's E3SM Atmosphere Model Version 1 (EAMv1). There are 256x12 PPE simulations with each simulation run for 5 days following the approach of Cloud Associated Parameterization Testbed (CAPT) and transpose Atmosphere Model Intercomparison Project (AMIP) paradigm. The diagnostic variables associated with the parameterizations of turbulence and shallow convection, deep convection, cloud microphysics, and gravity wave drag at day 5 are saved and used for analyses in this paper.
description: This research was supported as part of the Energy Exascale Earth System Model (E3SM) project, funded by the U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research Earth System Modeling program.
DOI: 10.5281/zenodo.7668295
title: Model output for analyses in Qian et al. (2023) "Region and cloud regime dependences of parametric sensitivity in E3SM Atmosphere Model".

description: This archive contains post-processed data for analyses in Qian et al. (2023) "<strong>Region and cloud regime dependences of parametric sensitivity in E3SM Atmosphere Model</strong>". These data are model output from the Perturbed Parameters Ensemble (PPE) simulations conducted with DOE's E3SM Atmosphere Model Version 1 (EAMv1). There are 256x12 PPE simulations with each simulation run for 5 days following the approach of Cloud Associated Parameterization Testbed (CAPT) and transpose Atmosphere Model Intercomparison Project (AMIP) paradigm. The diagnostic variables associated with the parameterizations of turbulence and shallow convection, deep convection, cloud microphysics, and gravity wave drag at day 5 are saved and used for analyses in this paper.
description: This research was supported as part of the Energy Exascale Earth System Model (E3SM) project, funded by the U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research Earth System Modeling program.
DOI: 10.6084/m9.figshare.14898718
title: Dealing with minor differences in bone matrix: can spectra follow the DNA preservation?

description: Attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy is a relatively fast and inexpensive but reliable method that can be used as a rough screening tool for DNA preservation. Although it is an excellent analytical tool, it only provides relative information on the chemical structure of heterogeneous materials such as bone and its usefulness and accuracy for predicting the preservation of DNA in samples originating from different body regions of minimally altered remains was never tested before. 144 bone samples were collected from different body regions of three individuals discovered in a Second World War mass grave. DNA was extracted and quantified, followed by STR typing. Samples were analysed with ATR-FTIR spectroscopy. Comparing the preservation state of DNA and chemometric indices, the usefulness of the method was tested. Correlations between the DNA preservation and chemometric indices were highly variable, especially when considering different body regions. Best DNA preservation was correlated with a balanced ratio between carbonates and phosphates, and with high collagen quality and quantity. It seems that, when dealing with relatively young and well-preserved remains, more attention should be paid to collagen quality. In addition, the results indicate that DNA quality and DNA quantity correlate differently with chemometric indices.
DOI: 10.6084/m9.figshare.14898718.v1
title: Dealing with minor differences in bone matrix: can spectra follow the DNA preservation?

description: Attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy is a relatively fast and inexpensive but reliable method that can be used as a rough screening tool for DNA preservation. Although it is an excellent analytical tool, it only provides relative information on the chemical structure of heterogeneous materials such as bone and its usefulness and accuracy for predicting the preservation of DNA in samples originating from different body regions of minimally altered remains was never tested before. 144 bone samples were collected from different body regions of three individuals discovered in a Second World War mass grave. DNA was extracted and quantified, followed by STR typing. Samples were analysed with ATR-FTIR spectroscopy. Comparing the preservation state of DNA and chemometric indices, the usefulness of the method was tested. Correlations between the DNA preservation and chemometric indices were highly variable, especially when considering different body regions. Best DNA preservation was correlated with a balanced ratio between carbonates and phosphates, and with high collagen quality and quantity. It seems that, when dealing with relatively young and well-preserved remains, more attention should be paid to collagen quality. In addition, the results indicate that DNA quality and DNA quantity correlate differently with chemometric indices.
DOI: 10.6084/m9.figshare.22109038
title: The complete plastome of <i>Glandora prostrata</i> subsp. <i>lusitanica</i> (Samp.) D.C.Thomas (Boraginaceae), the first chloroplast genome belonging to the <i>Glandora</i> genus

description: <i>Glandora prostrata</i> (Loisel.) D.C.Thomas (Thomas et al., 2008), besides being a common plant of western and south-western Europe and north-western Africa, is a species with a wealth of reported uses in traditional and folk medicine. The chloroplast genome of <i>Glandora prostrata</i> subsp. <i>lusitanica</i> (Samp.) D.C.Thomas (Thomas et al., 2008) isolate BPTPS049 described in this study is the first publicly available complete plastome belonging to the <i>Glandora</i> genus. The chloroplast genome (GenBank accession number: ON641304) is 150,041 bp in length with 37.5% GC content, displaying a quadripartite structure that contains a pair of inverted repeat regions (25,833 bp each), separated by a large (81,222 bp) and small (17,153 bp) single-copy regions. It has 131 annotated genes including 86 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic analysis performed confirms that <i>G. prostrata</i> subsp. <i>lusitanica</i> is placed under the Boraginaceae family, which belongs to the Boraginales order. This study will contribute to conservation, phylogenetic, and evolutionary studies that comprise this traditional species relevant to the landscape of aromatic, medicinal, and condiment plants from Portugal.
DOI: 10.6084/m9.figshare.22109038.v1
title: The complete plastome of <i>Glandora prostrata</i> subsp. <i>lusitanica</i> (Samp.) D.C.Thomas (Boraginaceae), the first chloroplast genome belonging to the <i>Glandora</i> genus

description: <i>Glandora prostrata</i> (Loisel.) D.C.Thomas (Thomas et al., 2008), besides being a common plant of western and south-western Europe and north-western Africa, is a species with a wealth of reported uses in traditional and folk medicine. The chloroplast genome of <i>Glandora prostrata</i> subsp. <i>lusitanica</i> (Samp.) D.C.Thomas (Thomas et al., 2008) isolate BPTPS049 described in this study is the first publicly available complete plastome belonging to the <i>Glandora</i> genus. The chloroplast genome (GenBank accession number: ON641304) is 150,041 bp in length with 37.5% GC content, displaying a quadripartite structure that contains a pair of inverted repeat regions (25,833 bp each), separated by a large (81,222 bp) and small (17,153 bp) single-copy regions. It has 131 annotated genes including 86 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic analysis performed confirms that <i>G. prostrata</i> subsp. <i>lusitanica</i> is placed under the Boraginaceae family, which belongs to the Boraginales order. This study will contribute to conservation, phylogenetic, and evolutionary studies that comprise this traditional species relevant to the landscape of aromatic, medicinal, and condiment plants from Portugal.
DOI: 10.6084/m9.figshare.22004062
title: The complete chloroplast genome sequence of the medicinal plant, <i>Dracocephalum rupestre</i> (Lamiaceae)

description: <i>Dracocephalum rupestre</i> (tribe Mentheae; Lamiaceae) is a perennial herb from Korea and China with high ornamental and medicinal value. Here, we report its complete chloroplast genome to provide insight into the phylogenetic relationships of <i>Dracocephalum</i>. The genome is 151,230 bp long, with two inverted repeat regions (25,643 bp each) that separate a large single-copy region (82,536 bp) and a small single-copy region (17,408 bp). It contains 133 genes that encode 88 proteins, eight rRNAs, and 37 tRNAs. The maximum-likelihood phylogenetic analysis strongly supported <i>Dracocephalum</i> monophyly, showing that the genus forms a sister group with the subtribe Menthinae in the tribe Mentheae.
DOI: 10.6084/m9.figshare.22004062.v1
title: The complete chloroplast genome sequence of the medicinal plant, <i>Dracocephalum rupestre</i> (Lamiaceae)

description: <i>Dracocephalum rupestre</i> (tribe Mentheae; Lamiaceae) is a perennial herb from Korea and China with high ornamental and medicinal value. Here, we report its complete chloroplast genome to provide insight into the phylogenetic relationships of <i>Dracocephalum</i>. The genome is 151,230 bp long, with two inverted repeat regions (25,643 bp each) that separate a large single-copy region (82,536 bp) and a small single-copy region (17,408 bp). It contains 133 genes that encode 88 proteins, eight rRNAs, and 37 tRNAs. The maximum-likelihood phylogenetic analysis strongly supported <i>Dracocephalum</i> monophyly, showing that the genus forms a sister group with the subtribe Menthinae in the tribe Mentheae.
DOI: 10.6084/m9.figshare.14816058.v1
title: Osteoclast-like giant cells in hepatocellular carcinoma case description and review of the literature

description: The presence of osteoclast-like giant cells (OGC) in hepatocellular carcinoma (HCC) is rare and literature on this topic is scarce. In this article, we report on a case of a 77-year-old male patient with HCC with OGC and provide an overview of the current literature. We conducted a systematic search to find all available literature on OGC in HCC. The electronic databases PubMed, Web of Science, Embase and CENTRAL were searched from inception until October 2020. Thirteen articles on this topic were identified and were included in this review. Data on 14 patients were available, described in twelve case reports, one patient in a patient series and the present case. Median age of included patients was 68 years. Two patients underwent neoadjuvant therapy prior to surgery. Of the 14 cases, eight tumours with OGC arose in a cirrhotic liver. Oncological outcome in this series was unfavourable, even after surgical resection, with a median disease-free survival of 75 d. The presence of OGC in HCC is rare. Current literature is scarce, and suggests an unfavourable outcome in regard to overall survival of HCC.
DOI: 10.6084/m9.figshare.14816058
title: Osteoclast-like giant cells in hepatocellular carcinoma case description and review of the literature

description: The presence of osteoclast-like giant cells (OGC) in hepatocellular carcinoma (HCC) is rare and literature on this topic is scarce. In this article, we report on a case of a 77-year-old male patient with HCC with OGC and provide an overview of the current literature. We conducted a systematic search to find all available literature on OGC in HCC. The electronic databases PubMed, Web of Science, Embase and CENTRAL were searched from inception until October 2020. Thirteen articles on this topic were identified and were included in this review. Data on 14 patients were available, described in twelve case reports, one patient in a patient series and the present case. Median age of included patients was 68 years. Two patients underwent neoadjuvant therapy prior to surgery. Of the 14 cases, eight tumours with OGC arose in a cirrhotic liver. Oncological outcome in this series was unfavourable, even after surgical resection, with a median disease-free survival of 75 d. The presence of OGC in HCC is rare. Current literature is scarce, and suggests an unfavourable outcome in regard to overall survival of HCC.
DOI: 10.5281/zenodo.7673430
title: GG_NO2_V1_OMI: long-term global gapless daily NO2 vertical column density from OMI during 2005-2022

description: To be updated.
DOI: 10.6084/m9.figshare.20888614
title: Trajectories.zip

description: Trajectories of protein ligand binding of yellow head virus 3CLpro and candidate compounds.
DOI: 10.6084/m9.figshare.20888614.v1
title: Trajectories.zip

description: Trajectories of protein ligand binding of yellow head virus 3CLpro and candidate compounds.
DOI: 10.6084/m9.figshare.20889694
title: Trajectories of duplicated simulations.

description: Raw data contain trajectories of duplicated simulations performed on systems of the best four compounds and the standard molecule.
DOI: 10.5281/zenodo.7683747
title: GG_NO2_V1_OMI: long-term global gapless daily NO2 vertical column density from OMI during 2005-2022

description: To be updated.
DOI: 10.5281/zenodo.7673429
title: GG_NO2_V1_OMI: long-term global gapless daily NO2 vertical column density from OMI during 2005-2022

description: To be updated.
DOI: 10.6084/m9.figshare.22153412
title: C24-SMT alignment

description: We reconstructed the evolutionary relationships of animal C24-SMTs from sponges, cnidarians, rotifers, mollusks and annelids, and compared these to previously described C24-SMTs from bacteria, microbial eukaryotes, fungi and plants. Together with the animal C24-SMTs these sequences were trimmed (&gt;200 aa and &lt;400aa), clustered (90% ID), aligned using mafft with ginsi (Katoh et al. 2005) and trimmed with BMGE (Criscuolo et al 2010). IQ-TREE (v1.6.12) (Minh et al. 2020) was used to predict the best-fit models of evolution and to calculate a maximum-likelihood tree with ultrafast bootstrap support values from the concatenated alignment.
DOI: 10.6084/m9.figshare.22153448.v1
title: C24-SMT iqtree output

description: We reconstructed the evolutionary relationships of animal C24-SMTs from sponges, cnidarians, rotifers, mollusks and annelids, and compared these to previously described C24-SMTs from bacteria, microbial eukaryotes, fungi and plants. Together with the animal C24-SMTs these sequences were trimmed (&gt;200 aa and &lt;400aa), clustered (90% ID), aligned using mafft with ginsi (Katoh et al. 2005) and trimmed with BMGE (Criscuolo et al 2010). IQ-TREE (v1.6.12) (Minh et al. 2020) was used to predict the best-fit models of evolution and to calculate a maximum-likelihood tree with ultrafast bootstrap support values from the concatenated alignment.
DOI: 10.6084/m9.figshare.22153448
title: C24-SMT iqtree output

description: We reconstructed the evolutionary relationships of animal C24-SMTs from sponges, cnidarians, rotifers, mollusks and annelids, and compared these to previously described C24-SMTs from bacteria, microbial eukaryotes, fungi and plants. Together with the animal C24-SMTs these sequences were trimmed (&gt;200 aa and &lt;400aa), clustered (90% ID), aligned using mafft with ginsi (Katoh et al. 2005) and trimmed with BMGE (Criscuolo et al 2010). IQ-TREE (v1.6.12) (Minh et al. 2020) was used to predict the best-fit models of evolution and to calculate a maximum-likelihood tree with ultrafast bootstrap support values from the concatenated alignment.
DOI: 10.6084/m9.figshare.22178060
title: Supplementary Materials for "Physical, psychological, and behavioural problems among children and adolescents in countries with different economic status during the COVID-19 pandemic: A systematic review and meta-analysis"

description: Supplementary materials for "Physical, psychological, and behavioural problems among children and adolescents in countries with different economic status during the COVID-19 pandemic: A systematic review and meta-analysis".
DOI: 10.6084/m9.figshare.22178060.v1
title: Supplementary Materials for "Physical, psychological, and behavioural problems among children and adolescents in countries with different economic status during the COVID-19 pandemic: A systematic review and meta-analysis"

description: Supplementary materials for "Physical, psychological, and behavioural problems among children and adolescents in countries with different economic status during the COVID-19 pandemic: A systematic review and meta-analysis".
DOI: 10.6084/m9.figshare.21907545.v1
title: 考虑并行无人机调度策略的电动车路径优化模型

description: 这是题为“考虑并行无人机调度策略的电动车路径优化模型”手稿的实验数据
DOI: 10.6084/m9.figshare.21799793.v11
title: Targeting Cancer Cell Signaling Using Precision Oncology Towards a Holistic Approach to Cancer Therapeutics

description: The mutational changes occurring in the regulatory genes responsible for the maintenance of optimal cell growth and proliferation gradually lead to cancer progression and metastasis. Furthermore, patients with the same cancer types often respond differently to different cancer therapies, indicating the need for a patient-specific treatment regimen for the disease. Precision oncology is the new field of cancer research that relies on genetic profiling of individual tumors to identify targetable alterations for custom-tailored personalized treatment of the disease. It is to rely upon the genomic study of cancer cells to get a clear picture of the prognosis and pathways involved in disease progression and to look for the means to selectively target them for a cure. This article intends to briefly explain the foundations and frontiers of precision oncology in the context of technological advances being made in this direction to assess its scope and importance in the realization of a proper cure for cancer.
DOI: 10.6084/m9.figshare.21907545.v2
title: 考虑并行无人机调度策略的电动车路径优化模型

description: 这是题为“考虑并行无人机调度策略的电动车路径优化模型”手稿的实验数据
DOI: 10.6084/m9.figshare.21907545
title: test1

description: content
DOI: 10.6084/m9.figshare.21907545.v3
title: 考虑并行无人机调度策略的电动车路径优化模型-删除

description: 这是题为“考虑并行无人机调度策略的电动车路径优化模型”手稿的实验数据
DOI: 10.6084/m9.figshare.21907545.v4
title: test1

description: content
DOI: 10.6084/m9.figshare.22193074
title: 电动车-无人机协同配送模式下带时间窗的车辆路径优化问题

description: 这是一篇题为“ 电动车-无人机协同配送模式下带时间窗的车辆路径优化问题 ”手稿的实验数据
DOI: 10.34740/kaggle/dsv/5085816
title: Elon Musk Tweets
DOI: 10.5281/zenodo.7553001
title: Processed CMIP6 data for "The climate response to the Mt Pinatubo eruption does not constrain climate sensitivity"

description: Processed CMIP6 output for Pauling et al. "The climate response to the Mt Pinatubo eruption does not constrain climate sensitivity" submitted to Geophysical Research Letters in 2023. Download this GitHub repository: https://github.com/andrewpauling/paulingGRL2022 and place the unzipped "processed" folder inside the "data" folder.
DOI: 10.5281/zenodo.7686736
title: Processed CMIP6 data for "The climate response to the Mt Pinatubo eruption does not constrain climate sensitivity"

description: Processed CMIP6 output for Pauling et al. "The climate response to the Mt Pinatubo eruption does not constrain climate sensitivity" submitted to Geophysical Research Letters in 2023. Download this code repository: https://doi.org/10.5281/zenodo.7553024 and follow the instructions in the README to download data and reproduce the results of the paper.