cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.881291
title: Land cover change maps for Mato Grosso State in Brazil: 2001-2016, links to files

description: This data sets include yearly maps of land cover classification for the state of Mato Grosso, Brasil, from 2001 to 2016, based on MODIS image time series at 250 meter spatial resolution. Ground samples consisting of 2,115 time series with known labels are used as training data for a support vector machine classifier. The classes include natural and human-transformed land areas, discriminating among different agricultural crops in state of Mato Grosso, Brazil's agricultural frontier. The results provide spatially explicit estimates of productivity increases in agriculture as well as the trade-offs between crop and pasture expansion. Quality assessment using a 5-fold cross-validation of the training samples indicates an overall accuracy of 93% and the following user's and producer's accuracy for the land cover classes:Cerrado: UA - 99% PA - 98%Fallow_Cotton UA - 100% PA - 100%Forest UA - 99% PA - 98%Pasture UA - 95% PA - 96%Soy-Corn UA- 87% PA - 97%Soy-Cotton UA - 99% PA - 94%Soy-Fallow UA - 100% PA - 100%Soy-Millet UA- 84% PA - 84%Soy-Sunflower UA - 85% PA - 85%---The correlation coefficients between the agricultural areas classified by our method and the estimates by IBGE (Brazil's Census Bureau) for the harvests from 2005 to 2016, were equal to 0.98. At state level the soybean, cotton, corn and sunflower areas had a correlation equal 0.98, 0.73, 0.96 and 0.80.---The following data sets are provided:(a) The classified maps in compressed TIFF format (one per year) at MODIS resolution.(b) A QGIS style file for displaying the data in the QGIS software(c) An RDS file (R compressed format) with the training data set (2,115 ground samples).---The software used to produce the analysis is available as open source on https://github.com/e-sensing.---Note: The TIFF raster files use the Sinusoidal Projection, which is the same cartographical projection used by the input MODIS images. When opening the TIFF raster maps in QGIS, to ensure correct navigation please use the Sinusoidal Projection, by selecting in QGIS projection menu, the following option:"Generated CRS (+proj=sinu +lon_0=0 +x_0=0 +y_0=0 +a=6371007.181 +b=6371007.181 +units=m +no_defs)"
description: Supplement to: Picoli, Michelle; Câmara, Gilberto; Sanches, Ieda; Simoes, Rolf; Carvalho, Alexandre X Y; Maciel, Adeline; Coutinho, Alexandre; Esquerdo, Julio; Antunes, Joao; Begotti, Rodrigo; Arvor, Damien; Almeida, Claudio (2018): Big earth observation time series analysis for monitoring Brazilian agriculture. ISPRS Journal of Photogrammetry and Remote Sensing, 145, 328-339
DOI: 10.22000/1827
title: Dataset belonging to the Publication: "Interfacial fluid rheology of soft particles"

description: This dataset contains the data used to create the figure in the associated publication "Interfacial fluid rheology of soft particles". In the folder _article and _SM the data used to realise the different figures can be found. For every figure/panel you can find the set of data as .txt, .csv or .dat (Matbal).
DOI: 10.25828/5z2w-7678
title: National Income Dynamics Study - Coronavirus Rapid Mobile Survey 2020, Wave 2
DOI: 10.25828/7tn9-1998
title: National Income Dynamics Study - Coronavirus Rapid Mobile Survey 2020, Wave 1
DOI: 10.25828/awhe-t852
title: National Income Dynamics Study - Coronavirus Rapid Mobile Survey 2021, Wave 5
DOI: 10.25828/s82x-nx07
title: National Income Dynamics Study - Coronavirus Rapid Mobile Survey 2020, Wave 3
DOI: 10.25828/y5qj-x095
title: National Income Dynamics Study - Coronavirus Rapid Mobile Survey 2021, Wave 4
DOI: 10.34740/kaggle/dsv/1183165
title: Brain Tumor Classification (MRI)
DOI: 10.3886/e214441v2
title: Data and code for Klesment and Lust, 2024 EEH

description: Using pre-industrial rural Estonia as an example, the article studies fertility response to short-term economic stress in a manorial society in eastern Europe. It considers whether the fertility response to rye price fluctuations was deliberate and whether it was socially differentiated. It appears that an increase in the price of rye resulted in the drop of conceptions within the next year and the magnitude of the impact on fertility was roughly similar to that in several other European settings in the 19th century. As long as the manorial system was maintained, farmers were more sensitive to price hikes than the landless, but with the decline of the mutual economic dependence between manors and farms, the landless laborers became more vulnerable to price increases. Our analysis of the timing of the fertility response reveals no deliberate postponement of conceptions immediately before or after the low harvests or price increases. Instead, conceptions dropped only in the spring and summer season of the next year, indicating a non-deliberate and spontaneous response.
description: Rural population, births (parity 2-10) to mothers aged 15-45, different socio-economic groups. .
DOI: 10.5066/p13kjtwx
title: Egg Mercury Concentration and Egg Size in Two Songbird Species

description: This dataset includes egg total mercury concentrations, egg total mercury burden, egg length, egg width, predicted egg volume, and predicted fresh wet weight according to egg position in the laying sequence for tree swallow and house wren eggs from the Cache Creek Settling Basin and Cosumnes River Preserve, in California's Central Valley during 2018.

These data support the following publication:
Hartman, C.A., Ackerman, J.T., Cooney, B., and Herzog, M.P., 2024. Egg mercury concentration and egg size varies with position in the laying sequence in two songbird species. Environmental Toxicology and Chemistry.
DOI: 10.5066/p9njuqyh
title: Effects of water chemistry on carbon dioxide toxicity to zebra mussels (Dreissena polymorpha)

description: Data were collected during experiments to determine the effects of water chemistry on carbon dioxide toxicity to zebra mussels (Dreissena polymorpha). Water chemistry parameters were collected for the water used in the study. Data were collected to model the relationship of carbon dioxide and pH in various water chemistries. Measurements were made to describe the animals used in the study.
DOI: 10.5066/p9yf6z4e
title: Dust and sediment data from Great Salt Lake and northern Utah, 2022

description: These are physical and geochemical (elemental, strontium isotope) data from dust and sediments collected from and around Great Salt Lake, Utah. Data were collected by the U.S. Geological Survey Utah Water Science Center (West Valley City, Utah) to better understand the degree to which populations in northern Utah are affected by Great Salt Lake dust, dust from other sources, and metals pollution. The samples were processed at the Utah Water Science Center and geochemical analysis was performed at the University of Utah's ICP-MS Metals and Strontium Isotope Facility (Salt Lake City, Utah). These data can be used to evaluate the spatial variability of dust and metals deposition to urban areas and natural ecosystems near Great Salt Lake.
DOI: 10.5281/zenodo.10059777
title: QC.COVID_Data: v1.0.0

description: This repository contains two databases (daily and weekly) on the management of the COVID-19 pandemic in Quebec. The data were collected/produced by the research team of Prof. Éric Montpetit as part of a research project on the public policies implemented during the pandemic.Ce dépôt contient deux bases de données (quotidienne et hebdomadaire) sur la gestion de la pandémie de COVID-19 au Québec. Les données ont été collectées/produites par l'équipe de recherche du Prof. Éric Montpetit dans le cadre d'un projet de recherche sur les politiques publiques mises en œuvre pendant la pandémie.
DOI: 10.5281/zenodo.11619129
title: Datasets for "From Earth to Space and Back again: A Story of Geophysics Told by 130 Years of AGU Article Titles"

description: These files include a file with journal article titles published by the American Geophysical Union for the years 1896 through 2023 and a file showing words included and exluded from the analysis and the category of word (scientific or methods/descriptor).
DOI: 10.5281/zenodo.12635539
title: "Resolving the source of branch length variation in the Y chromosome phylogeny" - Y chromosome dataset

description: Y chromosome dataset used in the paper "Resolving the source of branch length variation in the Y chromosome phylogeny" by Swiel et al. See the GitHub repository (https://github.com/yanivsw/y_chr_reference_bias) for more information.
DOI: 10.5281/zenodo.5709176
title: Datasets for ``Big bang nucleosynthesis limits and relic gravitational waves detection prospects''

description: <pre>This directory contains an index.html file with links to the run directories with secondary data for Table I of the paper "Big bang nucleosynthesis limits and relic gravitational waves detection prospects" by T. Kahniashvili, E. Clarke, J. Stepp, & Axel Brandenburg. If anything turns out to be incomplete, please email brandenb@nordita.org. </pre>
DOI: 10.5281/zenodo.7303765
title: Transfer reaction induced fission 238U(d,p-fission) with HELIOS

description: Upload includes: <strong>Pre-sorted data with built physics events. </strong>All experimental data in the files "gen_run###.root" <strong>Link to GutHub containing all relevant codes to sort the data and produce physics histograms. </strong>Analysis code at https://github.com/calemhoffman/digios/tree/h074_238U. README files describe the usage. <strong>Copy of electronic logbook containing experimental matters.</strong> "ELOG_H074_238U.pdf" in reverse chronological order. <strong>Document with detector distances and details on the setup.</strong> "h074_238U-setup.pptx" <strong>Absolute transfer (d,p) and transfer induced fission (d,pf) cross sections.</strong> "238U-dpf-supplemental-data.xlxs"
DOI: 10.5281/zenodo.7786290
title: Cohomology of the Mod 2 Steenrod algebra

description: In this repo you will find the charts of the cohomology of the Mod 2 Steenrod algebra up to total degree of 261 in many formats, including pdf, sqlite3 database and csv files. You can also find an interactive plot of the E2 page of the Adams spectral sequence on https://waynelin92.github.io/ss/index.html. In csv files, "1,2,3,4;7,8" stands for $x_1^2x_3^4+x_7^8$ where $x_i$ is the i'th generator in the generator csv table which might be given other names. That is all you need to read the csv tables. Everything else is self-explanatory. The sqlite3 database file is the same as the csv files. sqlite3 is very easy to learn and use and is supported by most programming languages. On the interactive plot, you can scroll the mouse wheel and drag to navigate. You can double click the dots to see the details of the elements including many of its multiples. The author is supported by China Postdoctoral Science Foundation 2021TQ0015 and the Fundamental Research Funds for the Central Universities, Peking University.
DOI: 10.6084/m9.figshare.25521214
title: Dilute species transport during generalized Newtonian fluid flow in porous medium systems Data

description: This includes data that was used to generate the plots and to run symbolic regression for a paper published in Water Resources Research.
DOI: 10.6084/m9.figshare.25818496
title: Molecular Sublimation Enabling 2D-3D Transformation of Orientational FAPbI3 Perovskites

description: This work introduces a novel 2D perovskite, serving as a highly anisotropic template for an all-solid phase transformation from 2D to 3D. This method, starting from a stable 2D intermediate and bypassing the challenges of solvent involvement, enables the synthesis of large area films of α-FAPbI3 perovskite with long-range lattice order.
DOI: 10.6084/m9.figshare.25892764.v2
title: The predictive ability of self-care and psychological flow in occupational stress among nurses

description: Data & check list for the predictive ability of self-care and psychological flow in occupational stress among nurses
DOI: 10.6084/m9.figshare.28088000
title: Supplementary Material for: Heterochronic development of the perception of different types of visual illusions

description: Introduction: The underlying neural and/or perceptual mechanisms of different visual illusions are still unknown; thus, they continue to be the focus of many ongoing studies. Inconsistencies persist in the empirical findings for understanding how the perception of these illusions evolves over the course of development. 
Methods: We assessed 513 participants between 6.5 and 18.9 years of age, with 103 pairs of illusory and control images spanning five illusion types (Ebbinghaus, Müller-Lyer, Contrast, Moving Snake, and Subjective Contour). Misleading and helpful contexts were added when possible. 
Results: In general, we found that, except for the Ebbinghaus illusion susceptibility changes with age: while for the Müller-Lyer it decreases, for the Contrast, Moving Snake, and Kanizsa susceptibility increases. Across all illusory conditions participants' decision time decreased with age. Context also influenced the performance and choice latency. We also found a gender difference: boys were less susceptible than girls on contrast and moving snake illusions and were faster to answer on Müller-Lyer illusion trials. 
Conclusion: The current study found that susceptibility to illusions change in a manner that is age and in some cases sex specific. The different developmental trajectories of the perception of visual illusions support the idea of the lack of a common neural and/or perceptual process behind them. We can suggest that at least some of the cognitive processes and neural pathways involved develop in heterochronically.
DOI: 10.6084/m9.figshare.28088732
title: Supplementary Material for: Novel Von Hippel-Lindau Germline Variants in Iranian Patients with Retinal Capillary Hemangioblastoma

description: Introduction: To determine the potential genetic cause of retinal capillary hemangioblastoma (RCH) with symptoms of VHL disease. 
Case Presentations: Three Iranian families (5 RCH patients) with novel variants are included in this study. The VHL variant analysis was performed by the Sanger sequencing technique. Molecular dynamic (MDs) simulations were conducted to analyze conformational changes resulting from variants in VHL protein structure and were compared with that of the native structure. Novel variant sites, including c.511A&gt;C, c.511A&gt;T and c.514C&gt;T in exon 3 of the VHL gene were identified. According to the American College of Medical Genetics (ACMG) classifications, c.514C&gt;T (p.P172S) and c.511A&gt;C (p.K171Q) are classified as variants of uncertain significance (VUS), and c.511A&gt;T (p.K171*) is classified as a likely pathogenic variant. MD simulations demonstrated overall fluctuations of the proteins structure and a significantly lower degree of flexibility in the α-domain for the variant-encoded VHL protein structure compared to that of the native form. 
Conclusion: The structural information and computational analysis of the identified variants are predicted to induce conformational changes that limit the flexibility of pVHL interaction interface with Elongin B/C, Elongin C/B, and Cullin-2, which are necessary for HIF1-α binding. The genetic variants identified in Iranian patients with RCH may aid in the molecular confirmation of other patients diagnosed with VHL and their at-risk family members. These pioneering results that include detailed structural and functional analysis of a variant’s effect on the VHL protein may serve as a model for future studies.
DOI: 10.6084/m9.figshare.28088987
title: Supplementary Material for: Exploring Health Literacy among Adults with Hidradenitis Suppurativa

description: Background: Health literacy plays an important role in the management of chronic and debilitating skin diseases like hidradenitis suppurativa (HS). Adequate health literacy empowers patients to understand their disease, manage it effectively, and make informed decisions about their health. Exploring the interplay between health literacy and HS is essential to improve healthcare outcomes in this population. 

Objectives: This study aims to assess the prevalence of limited health literacy among HS patients and its associated factors which has never been studied before. 

Methods: In this epidemiological cross-sectional study data were collected through a population-wide survey-based study within the Lifelines Cohort Study in the Netherlands. Health literacy of participants with HS were compared to non-HS controls. Health literacy was measured using six validated questions covering functional, communicative, and critical health literacy. Associations between the characteristics of the HS group and limited health literacy were examined. 

Results: Out of 56,084 adult respondents, 1,156 participants with HS were identified. The prevalence of limited functional health literacy was 24.5% in the non-HS group and 26.4% in the HS group. Our findings indicate that limited health literacy among HS patients is associated with higher BMI (26.9 vs 25.8) [OR 0.969, 95% CI 0.941-0.998], lower education level (34.5% vs 19.9%) [OR 0.495, 95% CI 0.350-0.701], lower socioeconomic status (-0.68 vs -0.58) [OR 1.194, 95% CI 1.029-1.386]), and more severe disease stage according to the Hurley stage (33.0% vs. 25.8%) [OR 1.400, 95% CI 1.005-1.952].

Conclusions: Our study highlights the importance of addressing health literacy in HS patients, given the high prevalence of limited health literacy among this group and associations with higher BMI and more severe disease stage. Limited health literacy may contribute to poorer health outcomes, suboptimal healthcare utilization, elevated healthcare costs, and health disparities. Targeted interventions to improve health literacy could enhance care quality and outcomes for HS patients.
DOI: 10.6084/m9.figshare.28172105.v1
title: Supplementary Material for: Non-small cell lung cancer treated with epidermal growth factor receptor inhibitors: the effect of concurrent medications on patient outcomes

description: Introduction: EGFR tyrosine kinase inhibitor (TKI)-induced rash can be alleviated with tetracyclines (TCN) and topical corticosteroids (TCS), whereas drugs for acid-related disorders (DARD) can affect EGFR TKI absorption. The present study investigated the concomitant use of TCNs, TCSs, and DARDs with EGFR-TKIs in non-small cell lung cancer (NSCLC) and whether these affect patient outcomes.
Methods: We retrospectively collected data from all patients (n=1498) who had purchased for EGFR TKIs (erlotinib, gefitinib, and afatinib) in Finland between 2011-2020. Overall survival (OS) and time on treatment (ToT) were analyzed from the first EGFR TKI purchase.
Results: Early TCN purchases were registered in 298 (19.6%) patients; early TCS and DARD purchases were observed in 154 (10.1%) and 192 (12.9%) while similar percentages were detected in the EGFR mutant cohort. In the entire cohort, early purchase of TCSs and TCNs was associated with improved ToT, OS, and DARDs with inferior outcomes. In the multivariate analysis, TCSs retained their significance in ToT (HR, 0.78; 95% 0.66-0.94), TCNs in OS (HR, 0.73; 95% 0.63-0.84), and DARDs in both (HR, 1.28; 95% 1.091-1.495; HR, 1.19; 95% 1.01-1.41). In the EGFR mutant cohort, similar non-significant trends were observed for TCSs and DARDs. In the analysis according to EGFR TKI, erlotinib users had improved outcomes when early TCN or TCS purchases were registered, whereas DARDs were associated with worse outcomes among gefitinib users. 
Conclusions: Among EGFR-TKI-treated NSCLCs, the use of TCN, TCS, and DARD can affect treatment outcomes that should be considered in optimal patient care.
DOI: 10.6084/m9.figshare.28141691
title: Genome assemblies and annotation of <i>Verpa bohemica </i>and <i>Verpa conica</i>

description: We constructed subchromosomal genome assemblies for six strains of <i>Verpa </i>combing Nanopore and Illumina sequencing technologies. The average assembly sizes were 44.38 Mb for <i>V. bohemica</i> and 45.40 Mb for <i>V. conica</i>. Additionally, Hi-C data were used to anchor <i>V. bohemica</i> strain 21108 and <i>V. conica</i> strain 21120 to chromosomes 26 and 25, respectively. Benchmarking Universal Single-Copy Orthologue (BUSCO) analysis revealed that the completeness of the final assemblies exceeds 95%. Following the assembly and quality assessments, we annotated protein-coding genes and analyzed the phylogenetic relationships of the genus <i>Verpa</i>. We observed the presence of multiple accessory chromosomes in <i>Verpa</i>, suggesting the complexity of their chromosomal evolution. Furthermore, trough analyses of expaned gene families, along with the detecting of carbohydrate-active enzymes (CAZymes), we conducted a preliminary exploration of the genetic basis underlying the saprotrophic nutritional strategy of <i>Verpa</i>.
DOI: 10.15468/dl.fnnr74
title: Occurrence Download

description: A dataset containing 100360 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Dendronanthus indicus (Gmelin, 1789), Motacilla alba Linnaeus, 1758, Aegithalos concinnus (Gould, 1855), Copsychus saularis (Linnaeus, 1758), Parus major Linnaeus, 1758)"
 ]
}

 The dataset includes 100360 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062058-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qzs45p
title: Occurrence Download

description: A dataset containing 41049 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Tachybaptus ruficollis (Pallas, 1764), Tachybaptus ruficollis ruficollis)"
 ]
}

 The dataset includes 41049 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062065-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.