cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24637407.v1
title: Supplementary Material for: A Multicenter Phase 2 Trial Evaluating the Efficacy and Safety of Preoperative Lenvatinib Therapy for Patients with Advanced Hepatocellular Carcinoma (LENS-HCC Trial)

description: Introduction: The phase III REFLECT trial demonstrated that lenvatinib was superior to sorafenib in terms of progression-free survival (PFS), time to progression, and objective response rate (ORR) for patients with unresectable hepatocellular carcinoma (HCC). This study assessed the efficacy and safety of preoperative lenvatinib therapy for patients with oncologically or technically unresectable HCC. Methods: In this multicenter single-arm phase II trial, patients with advanced HCC and factors suggestive of a poor prognosis (macroscopic vascular invasion, extrahepatic metastasis, or multinodular tumors) were enrolled. Patients with these factors, even with technically resectable HCC, were defined as oncologically unresectable because of the expected poor prognosis after surgery. After 8 weeks of lenvatinib therapy, the patients were assessed for resectability, and tumor resection was performed if the tumor was considered technically resectable. The primary endpoint was the surgical resection rate. The secondary endpoints were the macroscopic curative resection rate, overall survival (OS), ORR, PFS, and the change in the indocyanine green retention rate at 15 minutes as measured before and after lenvatinib therapy. The trial was registered with the Japan Registry of Clinical Trials (s031190057). Results: Between July 2019 and January 2021, 49 patients (42 oncologically unresectable patients and 7 technically unresectable patients) from 11 centers were enrolled. The ORR was 37.5% based on mRECIST and 12.5% based on RECIST version 1.1. Thirty-three patients underwent surgery (surgical resection rate: 67.3%) without perioperative mortality. The surgical resection rate was 76.2% for oncologically unresectable patients and 14.3% for technically unresectable patients. The 1-year OS rate and median PFS were 75.9% and 7.2 months, respectively, with a median follow-up period of 9.3 months. Conclusions: The relatively high surgical resection rate seen in this study suggests the safety and feasibility of lenvatinib therapy followed by surgical resection for patients with oncologically or technically unresectable HCC.
DOI: 10.22000/1829
title: Data_ChemIngTec___Kanj-Heinke___1d-uptake-raw.zip
DOI: 10.5281/zenodo.8408680
title: Elucidating Structure-Property Relations in CaCO3 Precursors – From Polycarboxylate-Facilitated Bicarbonate Entrapment to Distinct Water Environments and ACC-Conductivity

description: Experimental data associated with Gindele et al. <em>Elucidating Structure-Property Relations in CaCO3<br> Precursors – From Polycarboxylate-Facilitated<br> Bicarbonate Entrapment to Distinct Water<br> Environments and ACC-Conductivity</em>, <em>Nature Communications.</em>
DOI: 10.5281/zenodo.8408679
title: Colloidal pathways of amorphous calcium carbonate formation lead to distinct water environments and conductivity

description: Experimental data associated with Gindele et al. Colloidal pathways of amorphous calcium carbonate formation lead to distinct water environments and conductivity, Nature Communications.
DOI: 10.5281/zenodo.8421689
title: Colloidal pathways of amorphous calcium carbonate formation lead to distinct water environments and conductivity

description: Experimental data associated with Gindele et al. Colloidal pathways of amorphous calcium carbonate formation lead to distinct water environments and conductivity, Nature Communications.
DOI: 10.6084/m9.figshare.24637368
title: Copper and Iron composition

description: The data sets contain one folder dedicated to copper and one to iron. Each of them can be used for two distinct purposes: regression and image segmentation. For regression, the microscopical images from the "copper-images" and "iron-images" folders can be used directly. The file names contain the XRF approximation of elemental composition for several elements. These represent the ground truth. The string encoding has the following format:element1_value1__element2_value2__element3_value3 - object name__i.jpg Example: Cu_0.03__Fe_98.16__P_0.14__Si_1.49__6 - Cui roman - fier - inainte__1.jpgThis reads that the copper is 0.03%, iron composition is 98.16% etc. and the image is the first (last part, "__1", before ".jpg") from the object "Cui roman - fier - inainte". The images made for the same object will contain the same string for the object name. The information can be extracted using a string tokenizer.For image segmentation, the same images from "copper-images" and "iron-images" folders can be used together with the associated masks from "copper-labels" and "iron-labels". The label files have the same resolution and each pixel value corresponds to a certain class. The classes are provided in the text files "copper-codes.txt" and "iron-codes.txt". The file names of the images used for validation and test purposes are given in the text files "copper-valid.txt", "iron-valid.txt", "copper-test.txt", and "iron-test.txt", respectively. The data set is described in the article below. Results on the data can be found in the article, as well.Ruxandra Stoean, Nebojsa Bacanin, Catalin Stoean, Leonard Ionescu, Miguel Atencia, Gonzalo Joya, Computational Framework for the Evaluation of the Composition and Degradation State of Metal Heritage Assets by Deep Learning, Journal of Cultural Heritage, 64, pp.198-206, 2023, https://doi.org/10.1016/j.culher.2023.10.007.If you publish material based on the current database, please refer the paper above within the References.The study took part within the project Object PErception and Reconstruction with deep neural Architectures (OPERA) https://sites.google.com/view/pce-opera/.
DOI: 10.25345/c5r49gm2z
title: MassIVE MSV000093501 - 32 mixture of standards treated with AQC
title: Data dependent analysis of a mixture of standards treated with aqc.
DOI: 10.5281/zenodo.5679544
title: Animation to visualize the effects of laser ablation on unhydrated cement clinker

description: This animation illustrates the effect of the damage on the surface of unhydrated cement clinker caused by a pulsed laser for a LA-ICP-MS mapping. The dataset contains the raw data and the final animations.


The images were acquired using a Thermofischer Scientific Helios G4 UX microscope at 2 kV/0.1 nA. The surface was tilted in two orientations by a few degree and an image was acquired after every tilt. The ablated area has a size of approx. 367 x 300 µm.


A detailed description of the specimen and the parameters used for the analysis can be found in the corresponding paper.


Funding


The research was supported by the Deutsche Forschungsgemeinschaft (DFG), grant number 344069666.
DOI: 10.5281/zenodo.5679545
title: Animation to visualize the effects of laser ablation on unhydrated cement clinker

description: This animation illustrates the effect of the damage on the surface of unhydrated cement clinker caused by a pulsed laser for a LA-ICP-MS mapping. The dataset contains the raw data and the final animations.


The images were acquired using a Thermofischer Scientific Helios G4 UX microscope at 2 kV/0.1 nA. The surface was tilted in two orientations by a few degree and an image was acquired after every tilt. The ablated area has a size of approx. 367 x 300 µm.


A detailed description of the specimen and the parameters used for the analysis can be found in the corresponding paper.


Funding


The research was supported by the Deutsche Forschungsgemeinschaft (DFG), grant number 344069666.
DOI: 10.6084/m9.figshare.24637428
title: Degraded Artefact Image Data Set

description: The data set consists of 334 images of 1920x1080 pixels extracted from a video file of an artefact from the Restoration and Conservation Laboratory, Oltenia Museum, Craiova, Romania. The ones where the broken part is visible have associatated masks to cover the missing parts. The images can be used for image inpainting, as well as for 3D modelling. The video file included resulted from an approach that is presented in the article below, which is submitted for publication in Journal of Cultural Heritage.Ruxandra Stoean, Nebojsa Bacanin, Catalin Stoean, Leonard Ionescu, Bridging the Past and Present: AI-Driven 3D Restoration of Degraded Artefacts for Museum Digital Display, submitted to Journal of Cultural Heritage.If you publish material based on the current database, please refer the paper above within the References.The study took part within the project Object PErception and Reconstruction with deep neural Architectures (OPERA) https://sites.google.com/view/pce-opera/.
DOI: 10.6084/m9.figshare.24637473
title: <b>All-trans retinoic acid alleviates collagen-induced arthritis and </b><b>promotes</b><b> </b><b>intestinal homeostasis</b>

description: In this study, we aimed to establish a collagen-induced arthritis (CIA) model and explore the potential mechanisms by which ATRA alleviates RA by exploring its effects on the gut microbiota, the intestinal epithelial barrier and intestinal immunity.
DOI: 10.4121/5e331649-1d35-4f4f-82a3-cc76a0edddef
title: Data of a discrete choice experiment regarding COVID-19 preferences transport policies

description: We investigated Dutch citizens' preferences concerning transport policies during COVID-19 pandemic through a discrete choice experiment. In the experiment respondents were asked to make several choices between transport policies during the COVID-19 pandemic. 840 respondents completed the experiment.
DOI: 10.4121/5e331649-1d35-4f4f-82a3-cc76a0edddef.v1
title: Data of a discrete choice experiment regarding COVID-19 preferences transport policies

description: We investigated Dutch citizens' preferences concerning transport policies during COVID-19 pandemic through a discrete choice experiment. In the experiment respondents were asked to make several choices between transport policies during the COVID-19 pandemic. 840 respondents completed the experiment.
DOI: 10.4121/bac3310c-bfdc-4f0b-a8b3-34849a4eae2d.v1
title: Dataset from "Combining Nickel- and Zinc-Porphyrin Sites via Covalent Organic Frameworks for Electrochemical CO2 Reduction"

description: Raw data for "Combining Nickel- and Zinc-Porphyrin Sites via Covalent Organic Frameworks for Electrochemical CO2 Reduction" by Hugo Veldhuizen†, Maryam Abdinejad†, Pieter J. Gilissen, Thomas Burdyny*, Frans D. Tichelaar, Sybrand van der Zwaag, Monique A. van der Veen*<br>Dataset includes nitrogen sorption, PSD, SEM, TEM, EDX, XPS, UV-vis, TGA, FT-IR, PXRD, NMR data and extensive electrochemical data used for analysis and plotting.<br>Images of main text and SI figures are included as well.
DOI: 10.57745/kfhgt5
title: JoinPair (2).tar

description: :unav
DOI: 10.25326/553
title: Ceilometer - P2OA-CRA station - L1A

description: Times series of L1A cloud base heights, vertical visibility, attenuated volume backscatter coefficient and linear depolarisation ratio of the backscatter volume from CL61 ceilometer at Centre de Recherches Atmospheriques station, part of P2OA platform.
DOI: 10.5281/zenodo.10204293
title: RheumaMIR

description: This dataset accompanies the research paper entitled: 
Harnessing ChatGPT and GPT-4 for Evaluating the Rheumatology Questions of the Spanish Access Exam to Specialized Medical Training.
Alfredo Madrid-García, Zulema Rosales-Rosado, Dalifer Dayanira Freites-Núñez, Inés Pérez-Sancristobal, Esperanza Pato-Cour, Chamaida Plasencia-Rodríguez, Luis Cabeza-Osorio, Lydia Abasolo Alcazar, Leticia Leon Mateos, Benjamín Fernández-Gutiérrez, Luis Rodríguez-Rodríguez
medRxiv 2023.07.21.23292821; doi: https://doi.org/10.1101/2023.07.21.23292821
The dataset contains 145 rheumatology-related questions extracted from the Spanish MIR exams held between the academic years 2009-2010 to 2022-2023. The questions are evaluated by ChatGPT, GPT-4, BARD and CLAUDE. Six rheumatologists assess the clinical reasoning of ChatGPT and GPT-4.
A more detailed description of the dataset can be found in "Dataset Description" Sheet
DOI: 10.5281/zenodo.8153291
title: RheumaMIR

description: This dataset accompanies the research paper entitled: 
Harnessing ChatGPT and GPT-4 for Evaluating the Rheumatology Questions of the Spanish Access Exam to Specialized Medical Training.
Alfredo Madrid-García, Zulema Rosales-Rosado, Dalifer Dayanira Freites-Núñez, Inés Pérez-Sancristobal, Esperanza Pato-Cour, Chamaida Plasencia-Rodríguez, Luis Cabeza-Osorio, Lydia Abasolo Alcazar, Leticia Leon Mateos, Benjamín Fernández-Gutiérrez, Luis Rodríguez-Rodríguez
medRxiv 2023.07.21.23292821; doi: https://doi.org/10.1101/2023.07.21.23292821
The dataset contains 145 rheumatology-related questions extracted from the Spanish MIR exams held between the academic years 2009-2010 to 2022-2023. The questions are evaluated by ChatGPT, GPT-4, BARD and CLAUDE. Six rheumatologists assess the clinical reasoning of ChatGPT and GPT-4.
A more detailed description of the dataset can be found in "Dataset Description" Sheet
DOI: 10.5281/zenodo.10149767
title: Dataset and code for the manuscript  "Plant indirect interactions reduce species richness but increase phylogenetic diversity"

description: This Zenodo repository contains the original data set and code for replicating the result published in the paper "Plant indirect interactions reduce species richness but increase phylogenetic diversity"
 

The "BD.xlsx" data frame contains the original data. The first column, "ID," is an ID for each one of the patches (i.e., vegetation units containing one or more individuals for the same or different species separated from other patches by bare ground). The second and third columns, "localidad" and "suelo", inform about the location where patches are found. The "species" column identifies the different species present at each patch.
 The "Comb1.xlsx" data frame contains the possible combination of 4 species for each ID (concatenation of "localidad" and "suelo") for all the species found in the sampling. Besides "ID", there is one column for each of the species included in interactions ("spA", "spB", "spC", "spD") that contains the name of the species.
The "phylo.xlsx" data frame contains the taxonomic information of the species found during the sampling. For each species recorded in column "species" we assign its genus (column "genus") and family (column "family")
  "ALL_IN.xlsx" is a data frame containing for each "ID" (proxy of location), the species involved in interactions ("spA", "spB", "spC" & "spD"), the "interaction sign" indicating if a given interaction is positive or negative (results based on simulation) and "Order" indicating the number of species involved in the interactions(from two to four).
"Code.R" provides the R code necessary to obtain the results. As statistics is based on simulation, every run can provide slightly different results, although differences do not affect interpretation. Please note that running time can be elevated depending on the computer used.
DOI: 10.5281/zenodo.10149768
title: Dataset and code for the manuscript  "Plant indirect interactions reduce species richness but increase phylogenetic diversity"

description: This Zenodo repository contains the original data set and code for replicating the result published in the paper "Plant indirect interactions reduce species richness but increase phylogenetic diversity"
 

The "BD.xlsx" data frame contains the original data. The first column, "ID," is an ID for each one of the patches (i.e., vegetation units containing one or more individuals for the same or different species separated from other patches by bare ground). The second and third columns, "localidad" and "suelo", inform about the location where patches are found. The "species" column identifies the different species present at each patch.
 The "Comb1.xlsx" data frame contains the possible combination of 4 species for each ID (concatenation of "localidad" and "suelo") for all the species found in the sampling. Besides "ID", there is one column for each of the species included in interactions ("spA", "spB", "spC", "spD") that contains the name of the species.
The "phylo.xlsx" data frame contains the taxonomic information of the species found during the sampling. For each species recorded in column "species" we assign its genus (column "genus") and family (column "family")
  "ALL_IN.xlsx" is a data frame containing for each "ID" (proxy of location), the species involved in interactions ("spA", "spB", "spC" & "spD"), the "interaction sign" indicating if a given interaction is positive or negative (results based on simulation) and "Order" indicating the number of species involved in the interactions(from two to four).
"Code.R" provides the R code necessary to obtain the results. As statistics is based on simulation, every run can provide slightly different results, although differences do not affect interpretation. Please note that running time can be elevated depending on the computer used.
DOI: 10.5281/zenodo.10208817
title: Research on the impact of the digital economy on narrowing the gap between urban and rural areas—An empirical analysis based on provincial panel data
DOI: 10.5281/zenodo.10208818
title: Research on the impact of the digital economy on narrowing the gap between urban and rural areas—An empirical analysis based on provincial panel data
DOI: 10.34740/kaggle/dsv/7063637
title: AutoXGB
DOI: 10.34740/kaggle/dsv/7063638
title: OnlineFree
DOI: 10.18462/iir.icr.2023.0868
title: Comparison of conventional and emerging technologies for hydrogen liquefaction.
DOI: 10.18462/iir.icr.2023.1148
title: Magnetic refrigerators for hydrogen liquefaction.
DOI: 10.6084/m9.figshare.24637569.v1
title: Biometries values from Non-lethal sampling for assessment of mitochondrial function does not affect metabolic rate and swimming performance

description: R code; statistical analysis on biometries values
DOI: 10.6084/m9.figshare.24637569
title: Biometries values from Non-lethal sampling for assessment of mitochondrial function does not affect metabolic rate and swimming performance

description: R code; statistical analysis on biometries values
DOI: 10.6084/m9.figshare.24637578
title: Whole animal performance and mitochondrial traits from Non-lethal sampling for assessment of mitochondrial function does not affect metabolic rate and swimming performance

description: R code; statistical analysis on whole-animal performance and mitochondrial traits
DOI: 10.6084/m9.figshare.24637578.v1
title: Whole animal performance and mitochondrial traits from Non-lethal sampling for assessment of mitochondrial function does not affect metabolic rate and swimming performance

description: R code; statistical analysis on whole-animal performance and mitochondrial traits
DOI: 10.6084/m9.figshare.24637581
title: Correlation individual mitochondrial traits from Non-lethal sampling for assessment of mitochondrial function does not affect metabolic rate and swimming performance

description: R code; statistical analysis to measure the correlation between whole-animal performance and mitochondrial parameters
DOI: 10.6084/m9.figshare.24637581.v1
title: Correlation individual mitochondrial traits from Non-lethal sampling for assessment of mitochondrial function does not affect metabolic rate and swimming performance

description: R code; statistical analysis to measure the correlation between whole-animal performance and mitochondrial parameters
DOI: 10.6084/m9.figshare.24637584
title: Thoral et al Dataset from Non-lethal sampling for assessment of mitochondrial function does not affect metabolic rate and swimming performance

description: All the data obtained during this project
DOI: 10.6084/m9.figshare.24637584.v1
title: Thoral et al Dataset from Non-lethal sampling for assessment of mitochondrial function does not affect metabolic rate and swimming performance

description: All the data obtained during this project
DOI: 10.24400/527896/a01-2022.005.220209
title: Mesoscale Eddy Trajectory Atlas META3.2 Delayed-Time all satellites
title: version META3.2 DT allsat

description: This dataset is composed of the trajectories and all associated parameters for the eddies detected with the py-eddy-tracker algorithm (Mason et al., 2014. DOI:10.1175/JTECH-D-14-00019.1) freely released under a GPL V3 license (https://github.com/AntSimi/py-eddy-tracker). The detection is made on maps of Absolute Dynamic Topography (ADT) computed with the maximum altimeter satellites available, the maps are distributed by the Copernicus Marine Service (https://marine.copernicus.eu, cf user manual for details). The maps are high-pass filtered with a half-power cutoff wavelenght of 700 km. The amplitude must be over 0.4 cm , the minimum number of grid points within a contour is 5 and the shape error must be below 70% on the raw effective contour. Note that the contour storage resampling may slightly change the provided error. The tracking is made through the overlap of the eddies. In case of multiple candidates, the eddy with the higher ratio overlap area over union area is associated to the trajectory. Trajectories are considered reliable when they last at least 10 days.
DOI: 10.17632/4fk4ybnfhg.1
title: A matched-filter-technique intermediate-depth earthquake catalog in Japan from March 11, 2010, to March 31, 2012

description: A matched-filter-technique intermediate-depth earthquake catalog in Japan from March 11, 2010, to March 31, 2012, around Latitude: 35°-45°N, Longitude: 130°-145°E, at Depth: 70 km -350 km. 

This data set contains the earthquake catalog to reproduce the main results in the journal article 'Spatiotemporal variations of intermediate-depth earthquakes before and after 2011 Tohoku earthquake revealed by a template matching catalog'. 

Authors: Qiushi Zhai1,2, Zhigang Peng1, Makoto Matsubara3, Kazushige Obara4, Yanbin Wang5

1 School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, Georgia, USA.
2 Seismological Laboratory, California Institute of Technology, Pasadena, California, USA.
3 National Research Institute for Earth Science and Disaster Resilience, Tsukuba, Ibaraki, Japan.
4 Earthquake Research Institute, University of Tokyo, Bunkyo, Tokyo, Japan.
5 Center for Advanced Radiation Sources, University of Chicago, Chicago, Illinois, USA.

Corresponding author: Qiushi Zhai (qzhai@caltech.edu)

Please cite the journal article if you used this dataset. 

The data format of the earthquake catalog in this dataset: 

Column	Information
1	EventTime(GMT+9)
2	Magnitude
3	TemplateTime
4	TemplateLatitude
5	TemplateLongitude
6	TemplateDepth
7	TemplateTime(GMT+9)
8	StackCC
9	MAD
DOI: 10.5281/zenodo.10080804
title: WRF Model namelist

description: This is WRF model's namelist for the article "Characteristics and variability of precipitation across different sectors of an extra-tropical cyclone – a case study over the high-latitudes of the Southern Ocean" accepted for publication in Journal of Geophysical Research: Atmospheres (11/2023) by SCH Truong, ST Siems, P May, Y Huang, E Vignon, A Gevorgyan