cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13100683
title: Additional file 2 of Reconstruction of ancient homeobox gene linkages inferred from a new high-quality assembly of the Hong Kong oyster (Magallana hongkongensis) genome

description: Additional file 2. Estimated repeat content present in the genome for the Pacific oyster, Sydney rock oyster, and Hong Kong oyster for both the assembly presented here, and the assembly of Peng et al. [46].
DOI: 10.6084/m9.figshare.13100686.v1
title: Additional file 3 of Reconstruction of ancient homeobox gene linkages inferred from a new high-quality assembly of the Hong Kong oyster (Magallana hongkongensis) genome

description: Additional file 3. Repeat landscape plots.
DOI: 10.6084/m9.figshare.13100686
title: Additional file 3 of Reconstruction of ancient homeobox gene linkages inferred from a new high-quality assembly of the Hong Kong oyster (Magallana hongkongensis) genome

description: Additional file 3. Repeat landscape plots.
DOI: 10.6084/m9.figshare.13100689
title: Additional file 4 of Reconstruction of ancient homeobox gene linkages inferred from a new high-quality assembly of the Hong Kong oyster (Magallana hongkongensis) genome

description: Additional file 4. Homeobox gene sequences and genomic locations in mollusc genomes.
DOI: 10.6084/m9.figshare.13100698.v1
title: Additional file 1 of CKD-5, a novel pan-histone deacetylase inhibitor, synergistically enhances the efficacy of sorafenib for hepatocellular carcinoma

description: Additional file 1: Table S1. A list of genes up-regulated with fold change ≥2 in cDNA microarray analysis. Table S2. Growth inhibition rates of each treatment. Figure S1. The cytotoxic efficacy of CKD-5 and panobinostat in SNU-761 cells. Both panobinostat and CKD-5 treatment reduced cell proliferation, and the cytotoxic efficacy was more potent in CKD-5 than panobinostat especially when combined with Sorafenib. Figure S2. Results of cDNA microarray assay. (A) The number of up- or down-regulated probes filtered by P-value and various fold changes. (B) A scatter plot of expression level between the control and HDACi-treated samples. (C) Hierarchical clustering heatmap. (D-F) Gene-enrichment and functional annotation analysis using DAVID based on Gene Ontology database. Figure S3. Changes in tumor volume over time after each treatment in a model of C3H mouse implanted with MH-134 cells. Combination therapy of high dose CKD-5 with sorafenib significantly suppressed tumor growth more than any other treatment. Figure S4. The degree of apoptosis in (A) liver and (B) spleen tissue assessed by TUNEL and H&E staining. Little apoptosis of the liver and spleen tissue was detected in all treatment groups.
DOI: 10.6084/m9.figshare.13100698
title: Additional file 1 of CKD-5, a novel pan-histone deacetylase inhibitor, synergistically enhances the efficacy of sorafenib for hepatocellular carcinoma

description: Additional file 1: Table S1. A list of genes up-regulated with fold change ≥2 in cDNA microarray analysis. Table S2. Growth inhibition rates of each treatment. Figure S1. The cytotoxic efficacy of CKD-5 and panobinostat in SNU-761 cells. Both panobinostat and CKD-5 treatment reduced cell proliferation, and the cytotoxic efficacy was more potent in CKD-5 than panobinostat especially when combined with Sorafenib. Figure S2. Results of cDNA microarray assay. (A) The number of up- or down-regulated probes filtered by P-value and various fold changes. (B) A scatter plot of expression level between the control and HDACi-treated samples. (C) Hierarchical clustering heatmap. (D-F) Gene-enrichment and functional annotation analysis using DAVID based on Gene Ontology database. Figure S3. Changes in tumor volume over time after each treatment in a model of C3H mouse implanted with MH-134 cells. Combination therapy of high dose CKD-5 with sorafenib significantly suppressed tumor growth more than any other treatment. Figure S4. The degree of apoptosis in (A) liver and (B) spleen tissue assessed by TUNEL and H&E staining. Little apoptosis of the liver and spleen tissue was detected in all treatment groups.
DOI: 10.6084/m9.figshare.13100683.v1
title: Additional file 2 of Reconstruction of ancient homeobox gene linkages inferred from a new high-quality assembly of the Hong Kong oyster (Magallana hongkongensis) genome

description: Additional file 2. Estimated repeat content present in the genome for the Pacific oyster, Sydney rock oyster, and Hong Kong oyster for both the assembly presented here, and the assembly of Peng et al. [46].
DOI: 10.6084/m9.figshare.13100689.v1
title: Additional file 4 of Reconstruction of ancient homeobox gene linkages inferred from a new high-quality assembly of the Hong Kong oyster (Magallana hongkongensis) genome

description: Additional file 4. Homeobox gene sequences and genomic locations in mollusc genomes.
DOI: 10.6084/m9.figshare.13100736.v1
title: Additional file 1 of Undernutrition and associated factors among adult HIV/AIDS patients receiving antiretroviral therapy in eastern zone of Tigray, Northern Ethiopia: a cross-sectional study

description: Additional file 1. S1 dataset- SPSS data of the questionnaire results.
DOI: 10.6084/m9.figshare.13100736
title: Additional file 1 of Undernutrition and associated factors among adult HIV/AIDS patients receiving antiretroviral therapy in eastern zone of Tigray, Northern Ethiopia: a cross-sectional study

description: Additional file 1. S1 dataset- SPSS data of the questionnaire results.
DOI: 10.6084/m9.figshare.13100246.v1
title: R0184_20170906a_videos

description: Rat 0184, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13100680.v1
title: Additional file 1 of Reconstruction of ancient homeobox gene linkages inferred from a new high-quality assembly of the Hong Kong oyster (Magallana hongkongensis) genome

description: Additional file 1. Sequencing data of oyster M. hongkongensis generated in this study.
DOI: 10.6084/m9.figshare.13100988.v1
title: Additional file 1 of In silico benchmarking of metagenomic tools for coding sequence detection reveals the limits of sensitivity and precision

description: Additional file 1: Table detailing the genomes used for metagenome simulations.
DOI: 10.6084/m9.figshare.13100988
title: Additional file 1 of In silico benchmarking of metagenomic tools for coding sequence detection reveals the limits of sensitivity and precision

description: Additional file 1: Table detailing the genomes used for metagenome simulations.
DOI: 10.6084/m9.figshare.13101025.v1
title: Additional file 1 of Comprehensive pathogen detection in sera of Kawasaki disease patients by high-throughput sequencing: a retrospective exploratory study

description: Additional file 1. Virus detection in DNA sequence. The data shows virus reads detected in each sample. The value is normalized to the number of aligned reads per million available reads (RPM).
DOI: 10.6084/m9.figshare.13101025
title: Additional file 1 of Comprehensive pathogen detection in sera of Kawasaki disease patients by high-throughput sequencing: a retrospective exploratory study

description: Additional file 1. Virus detection in DNA sequence. The data shows virus reads detected in each sample. The value is normalized to the number of aligned reads per million available reads (RPM).
DOI: 10.6084/m9.figshare.13101100
title: Additional file 2 of Inhibitory synaptic transmissions to the bed nucleus of the stria terminalis neurons projecting to the ventral tegmental area are enhanced in rats exposed to chronic mild stress

description: Additional file 2. Datasets used and/or analyzed during the current study.
DOI: 10.6084/m9.figshare.13101100.v1
title: Additional file 2 of Inhibitory synaptic transmissions to the bed nucleus of the stria terminalis neurons projecting to the ventral tegmental area are enhanced in rats exposed to chronic mild stress

description: Additional file 2. Datasets used and/or analyzed during the current study.
DOI: 10.6084/m9.figshare.13101108
title: Additional file 4 of A machine learning analysis of a “normal-like” IDH-WT diffuse glioma transcriptomic subgroup associated with prolonged survival reveals novel immune and neurotransmitter-related actionable targets

description: Additional file 4: Table S1. Stromal, immune and tumor purity score estimation using ESTIMATE.
DOI: 10.6084/m9.figshare.13101108.v1
title: Additional file 4 of A machine learning analysis of a “normal-like” IDH-WT diffuse glioma transcriptomic subgroup associated with prolonged survival reveals novel immune and neurotransmitter-related actionable targets

description: Additional file 4: Table S1. Stromal, immune and tumor purity score estimation using ESTIMATE.
DOI: 10.6084/m9.figshare.13101117.v1
title: Additional file 7 of A machine learning analysis of a “normal-like” IDH-WT diffuse glioma transcriptomic subgroup associated with prolonged survival reveals novel immune and neurotransmitter-related actionable targets

description: Additional file 7: Table S2. Genomic alterations of the NL IDH-WT tumors.
DOI: 10.6084/m9.figshare.13101117
title: Additional file 7 of A machine learning analysis of a “normal-like” IDH-WT diffuse glioma transcriptomic subgroup associated with prolonged survival reveals novel immune and neurotransmitter-related actionable targets

description: Additional file 7: Table S2. Genomic alterations of the NL IDH-WT tumors.
DOI: 10.6084/m9.figshare.13101136
title: Additional file 2 of Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens

description: Additional file 2: Table S1. Table of computational scores for predicted paralog pairs. (XLS 122 kb)
DOI: 10.6084/m9.figshare.13101139
title: Additional file 3 of Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens

description: Additional file 3: Table S2. Table of zdLFC scores from the paralog screen.
DOI: 10.6084/m9.figshare.13101139.v1
title: Additional file 3 of Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens

description: Additional file 3: Table S2. Table of zdLFC scores from the paralog screen.
DOI: 10.6084/m9.figshare.13101145.v1
title: Additional file 5 of Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens

description: Additional file 5: Table S4. Control essential and nonessential genes.
DOI: 10.6084/m9.figshare.13101142
title: Additional file 4 of Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens

description: Additional file 4: Table S3. Table of read counts of the paralog screen.
DOI: 10.6084/m9.figshare.13101145
title: Additional file 5 of Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens

description: Additional file 5: Table S4. Control essential and nonessential genes.
DOI: 10.6084/m9.figshare.13101136.v1
title: Additional file 2 of Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens

description: Additional file 2: Table S1. Table of computational scores for predicted paralog pairs. (XLS 122 kb)
DOI: 10.6084/m9.figshare.13101142.v1
title: Additional file 4 of Multiplex enCas12a screens detect functional buffering among paralogs otherwise masked in monogenic Cas9 knockout screens

description: Additional file 4: Table S3. Table of read counts of the paralog screen.
DOI: 10.6084/m9.figshare.13101166
title: Additional file 1 of Behavioral modifications by a large-northern herbivore to mitigate warming conditions

description: Additional file 1: Supplementary 1: Temperature Validation. Supplementary 2: Koyukuk males spline model results for elevation and temperature interaction. Supplementary 3: Interactive 3D plots of interaction between ambient temperature and canopy cover. Supplementary 4: Used-Available Tables of Covariates. Supplementary 5: Regional Habitat Features. Figure 1e: Regional variation in elevation. ANOVA results comparing regional variation in elevation show that all regions vary from each other statistically (F = 2705, p
DOI: 10.6084/m9.figshare.13101166.v1
title: Additional file 1 of Behavioral modifications by a large-northern herbivore to mitigate warming conditions

description: Additional file 1: Supplementary 1: Temperature Validation. Supplementary 2: Koyukuk males spline model results for elevation and temperature interaction. Supplementary 3: Interactive 3D plots of interaction between ambient temperature and canopy cover. Supplementary 4: Used-Available Tables of Covariates. Supplementary 5: Regional Habitat Features. Figure 1e: Regional variation in elevation. ANOVA results comparing regional variation in elevation show that all regions vary from each other statistically (F = 2705, p
DOI: 10.6084/m9.figshare.13101247
title: Additional file 1 of Factors influencing liberation from mechanical ventilation in coronavirus disease 2019: multicenter observational study in fifteen Italian ICUs

description: Additional file 1:. .
DOI: 10.6084/m9.figshare.13101247.v1
title: Additional file 1 of Factors influencing liberation from mechanical ventilation in coronavirus disease 2019: multicenter observational study in fifteen Italian ICUs

description: Additional file 1:. .
DOI: 10.5281/zenodo.4092974
title: Soft-story Buildings Street View Images

description: Street-view Images of soft-story buildings
DOI: 10.5281/zenodo.4092973
title: Soft-story Buildings Street View Images

description: Street-view Images of soft-story buildings
DOI: 10.18112/openneuro.ds003328.v1.0.0
title: motor_mapping
DOI: 10.5281/zenodo.4092769
title: The asymmetric diurnal latent heat flux in Chi-Lan montane cloud-fog forest: CLM simulations and sap flow observations

description: Chilan_30min_sap_flow_V_2020JJA.csv recorded the data of sap flow velocity during JJA 2020. CL_CTR.*.nc is the analyzed CTR simulations which consider fog interception as a source of canopy water. CL_EXP.*.nc is the analyzed EXP simulations that do not allow the canopy to hold the water.
DOI: 10.5281/zenodo.4092768
title: The asymmetric diurnal latent heat flux in Chi-Lan montane cloud-fog forest: CLM simulations and sap flow observations

description: Chilan_30min_sap_flow_V_2020JJA.csv recorded the data of sap flow velocity during JJA 2020. CL_CTR.*.nc is the analyzed CTR simulations which consider fog interception as a source of canopy water. CL_EXP.*.nc is the analyzed EXP simulations that do not allow the canopy to hold the water.
DOI: 10.5517/ccdc.csd.cc235wx3
title: CCDC 1942085: Experimental Crystal Structure Determination

description: Related Article: Zhenghua Li,  Liang Zhang,  Masayoshi Nishiura,  Gen Luo,  Yi Luo,  Zhaomin Hou|2020|ACS Catalysis|10|11685|doi:10.1021/acscatal.0c03018
DOI: 10.5517/ccdc.csd.cc23644m
title: CCDC 1942309: Experimental Crystal Structure Determination

description: Related Article: Jia-Xiong Chen, Ya-Fang Xiao, Kai Wang, Xiao-Chun Fan, Chen Cao, Wen-Cheng Chen, Xiang Zhang, Yi-Zhong Shi, Jia Yu, Feng-Xia Geng, Xiao-Hong Zhang, Chun-Sing Lee|2020|J.Mater.Chem.C|8|13263|doi:10.1039/D0TC03747H
DOI: 10.5517/ccdc.csd.cc23645n
title: CCDC 1942310: Experimental Crystal Structure Determination

description: Related Article: Jia-Xiong Chen, Ya-Fang Xiao, Kai Wang, Xiao-Chun Fan, Chen Cao, Wen-Cheng Chen, Xiang Zhang, Yi-Zhong Shi, Jia Yu, Feng-Xia Geng, Xiao-Hong Zhang, Chun-Sing Lee|2020|J.Mater.Chem.C|8|13263|doi:10.1039/D0TC03747H
DOI: 10.5517/ccdc.csd.cc237grl
title: CCDC 1943599: Experimental Crystal Structure Determination

description: Related Article: Wu Yang, Yingzi Li, Jiefeng Zhu, Wentan Liu, Jie Ke, Chuan He|2020|Chemical Science|11|10149|doi:10.1039/D0SC04180G
DOI: 10.5517/ccdc.csd.cc237gvp
title: CCDC 1943602: Experimental Crystal Structure Determination

description: Related Article: Wu Yang, Yingzi Li, Jiefeng Zhu, Wentan Liu, Jie Ke, Chuan He|2020|Chemical Science|11|10149|doi:10.1039/D0SC04180G
DOI: 10.5517/ccdc.csd.cc237gwq
title: CCDC 1943603: Experimental Crystal Structure Determination

description: Related Article: Wu Yang, Yingzi Li, Jiefeng Zhu, Wentan Liu, Jie Ke, Chuan He|2020|Chemical Science|11|10149|doi:10.1039/D0SC04180G
DOI: 10.5517/ccdc.csd.cc237gxr
title: CCDC 1943604: Experimental Crystal Structure Determination

description: Related Article: Wu Yang, Yingzi Li, Jiefeng Zhu, Wentan Liu, Jie Ke, Chuan He|2020|Chemical Science|11|10149|doi:10.1039/D0SC04180G
DOI: 10.5517/ccdc.csd.cc237gys
title: CCDC 1943605: Experimental Crystal Structure Determination

description: Related Article: Wu Yang, Yingzi Li, Jiefeng Zhu, Wentan Liu, Jie Ke, Chuan He|2020|Chemical Science|11|10149|doi:10.1039/D0SC04180G
DOI: 10.5517/ccdc.csd.cc237zbp
title: CCDC 1944082: Experimental Crystal Structure Determination

description: Related Article: Chengyu Wang, Yu Han, Mengyuan Li, Xuemei Zhou, Lingkai Kong, Yanzhong Li|2019|Eur.J.Org.Chem.|2019|98|doi:10.1002/ejoc.201901604
DOI: 10.25345/c5rx92
title: MassIVE MSV000086300 - GNPS_Synthetic cannabinoids in OF_CE_01
title: Assessment synthetic cannabinoids in oral fluid higher CE
DOI: 10.6084/m9.figshare.13101293
title: CIAMTIS_October 15, 2020_23.36.xlsx

description: Survey reseults for the mid-Atlantic states related to Debris Management Plans.
DOI: 10.6084/m9.figshare.13101293.v1
title: CIAMTIS_October 15, 2020_23.36.xlsx

description: Survey reseults for the mid-Atlantic states related to Debris Management Plans.
DOI: 10.6084/m9.figshare.13101299
title: CIAMTIS-Maryland_October 15, 2020_23.40.xlsx

description: Survey of debris management practices for Maryland.
DOI: 10.6084/m9.figshare.13101299.v1
title: CIAMTIS-Maryland_October 15, 2020_23.40.xlsx

description: Survey of debris management practices for Maryland.
DOI: 10.6084/m9.figshare.13101296
title: CIAMTIS Webinar Evaluation_October 15, 2020_23.47.xlsx

description: Evaluations of Disaster Debris Management training
DOI: 10.6084/m9.figshare.13101296.v1
title: CIAMTIS Webinar Evaluation_October 15, 2020_23.47.xlsx

description: Evaluations of Disaster Debris Management training
DOI: 10.5517/ccdc.csd.cc23gcgf
title: CCDC 1950224: Experimental Crystal Structure Determination

description: Related Article: Keshav Kumar, Neha Srivastav, Mayank Khera, Neetu Goel, Raghubir Singh, Varinder Kaur|2020|Inorg.Chem.|59|13098|doi:10.1021/acs.inorgchem.0c01202
DOI: 10.5517/ccdc.csd.cc23gcml
title: CCDC 1950229: Experimental Crystal Structure Determination

description: Related Article: Keshav Kumar, Neha Srivastav, Mayank Khera, Neetu Goel, Raghubir Singh, Varinder Kaur|2020|Inorg.Chem.|59|13098|doi:10.1021/acs.inorgchem.0c01202
DOI: 10.5517/ccdc.csd.cc23gczy
title: CCDC 1950240: Experimental Crystal Structure Determination

description: Related Article: Keshav Kumar, Neha Srivastav, Mayank Khera, Neetu Goel, Raghubir Singh, Varinder Kaur|2020|Inorg.Chem.|59|13098|doi:10.1021/acs.inorgchem.0c01202
DOI: 10.5517/ccdc.csd.cc23gd00
title: CCDC 1950241: Experimental Crystal Structure Determination

description: Related Article: Keshav Kumar, Neha Srivastav, Mayank Khera, Neetu Goel, Raghubir Singh, Varinder Kaur|2020|Inorg.Chem.|59|13098|doi:10.1021/acs.inorgchem.0c01202
DOI: 10.5517/ccdc.csd.cc23gdpp
title: CCDC 1950262: Experimental Crystal Structure Determination

description: Related Article: Keshav Kumar, Neha Srivastav, Mayank Khera, Neetu Goel, Raghubir Singh, Varinder Kaur|2020|Inorg.Chem.|59|13098|doi:10.1021/acs.inorgchem.0c01202
DOI: 10.5517/ccdc.csd.cc23kznb
title: CCDC 1953702: Experimental Crystal Structure Determination

description: Related Article: Thi Mo Nguyen,  Hoang Anh Cao,  Thi Thuong Thuong Cao,  Satoki Koyama,  Dinh Hung Mac, Thanh Binh Nguyen|2020|J.Org.Chem.|85|12058|doi:10.1021/acs.joc.0c00918
DOI: 10.5517/ccdc.csd.cc23kzpc
title: CCDC 1953703: Experimental Crystal Structure Determination

description: Related Article: Thi Mo Nguyen,  Hoang Anh Cao,  Thi Thuong Thuong Cao,  Satoki Koyama,  Dinh Hung Mac, Thanh Binh Nguyen|2020|J.Org.Chem.|85|12058|doi:10.1021/acs.joc.0c00918
DOI: 10.34740/kaggle/dsv/1564023
title: Musical Emotions Classification
DOI: 10.25959/5f07f8c2b58d9
title: Assessment of magmatic fertility using pXRF on altered rocks from the Ordovician Macquarie Arc, New South Wales
DOI: 10.6084/m9.figshare.13102085
title: Supplementary Material for: Vesicular Cystitis: A Chronic Cystitis Variant Often Unresponsive to Antibiotics and Electrofulguration

description: <b><i>Objective:</i></b> The aim of the study was to report on the presentation and outcomes of vesicular cystitis (VC), a chronic cystitis exhibiting translucent bladder mucosal vesicles, among women with antibiotic-refractory recurrent urinary tract infections (RUTIs). <b><i>Methods:</i></b> An analysis of our Institutional Review Board-approved series on antibiotic-refractory RUTIs was performed, selecting for documented VC lesions on cystoscopy. All patients had RUTIs defined as ≥3 urinary tract infections/year with positive urine culture. All patients were extensively treated with antibiotics with no resolution of RUTIs and were offered electrofulguration (EF) of VC lesions under anesthesia as a last resort. All patients had a 6-month post-EF office cystoscopy documenting persistence or resolution of the lesions, and a clinical outcome assessment based on RUTI frequency. <b><i>Results:</i></b> Of 482 patients, 18 (3.7%) treated during 2011–2017 met the study criteria. VC was most commonly found over the dome/anterior wall (7/18, 38%) and as pancystitis (7/18, 38%). There was often concomitant cystitis cystica of the trigone (8/18, 44%). At post-EF cystoscopy, persistence of VC was noted in 10/18 (56%) patients; 6/18 (33%) underwent repeat EF and an additional 3/18 (17%) were retreated due to new lesions after initial resolution. Two (11%) patients required simple cystectomy and urinary diversion due to RUTIs refractory to all interventions. Within a median follow-up of 2.8 years after EF, clinical cure was observed in 5/18 (28%), improvement in 10/18 (56%), and failure in 3/18 (17%) patients. <b><i>Conclusions:</i></b> Among women with antibiotic-refractory RUTIs, VC is an infrequent and persistent form of cystitis with a predilection for non-trigonal bladder surfaces, whose management is challenging.