cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3554226.v1
title: Appendix C. Number of species persisting in simulations of a the forest dynamics model for a 28-species subcommunity.

description: Number of species persisting in simulations of a the forest dynamics model for a 28-species subcommunity.
DOI: 10.3535/9pm-13z-ee7
title: †Dittopora colliculata (Eichwald, 1856)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f2q-chb-2mj
title: †Oanduellina Pushkin, 1977

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/crvr5ydr4c
title: Setting the Research Agenda for Clinical Artificial Intelligence in Pancreatic Ductal Adenocarcinoma Imaging. Schuurmans and Alves et al. 

description: This export contains all literature used for the review 'Setting the Research Agenda for Clinical Artificial Intelligence in Pancreatic Ductal Adenocarcinoma Imaging' by Schuurmans and Alves et al.
DOI: 10.3535/b2h-m6l-bbv
title: †Proavella proava (Eichwald, 1842)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qta-955-xd1
title: †Hallopora Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1557898.v5
title: Condition of trees in Danby Woodlot at York University using a transect

description: The purpose of this experiment was to determine conditions of trees near the edge of Danby Woods vs. trees in the centre of Danby Woods while learning techniques of collecting field data using a transect. Data was collected at Danby Woods at the York University Keele campus on Monday, September 21, 2015 from 3:30-4:30pm by two researchers named Sahar & Aziza. Sahar would take all the measurements and Aziza would note the measurements. At a temperature of 18°C, the weather was sunny and partially cloudy. At Danby Woods, given the time of year, there were many trees to study as the leaves had not fallen for Autumn, however the woodlot was not in great condition as there were many signs of human littering. First the researchers observed the woodlot for placing the transect tape in a location that would represent the whole woodlot. A 30m transect tape was placed in a straight line from the edge of the woodlot to the centre of the woodlot. Beginning from the edge of woodlot on the right side of the transect tape, the researchers chose 20 trees for 10 pairs that were above 12 feet. Each individual tree’s height was not measured, the trees that were double Sahar’s height would be approximately 12 feet tall. Then using a different transect tape, Sahar measured the distance in between each pair of trees, distance breast height (DBH) of each individual tree. Also, the condition of each individual tree was observed by the naked eye. After the data was collected, the transect tape was retrieved by the researchers. The data indicates that the trees near the edge of the Danby Woods are farther apart and are healthier with either living or large canopy trees. However toward the center of Danby Woods, the trees become closer together with some dead trees.
DOI: 10.6084/m9.figshare.20454279.v2
title: Quality and quantity of the sequencing data_ChIP_set2

description: Quality and quantity of the sequencing data_ChIP_set2 <br> The summary showed mapping rate, genome coverage, scores of the mapping quality, and duplicate reads of ChIP sequencing data of ChIP-set2. The quality and quantity of sequencing data was confirmed by bam qc of QualiMap.
DOI: 10.3535/0nm-kn0-1l4
title: †Kukersella borealis (Bassler, 1911)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8gg-3rj-f8f
title: †Orbignyella germana Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14826023.v1
title: Additional file 22 of Heterologous avian system for quantitative analysis of Syncytin-1 interaction with ASCT2 receptor

description: Additional file 22: Nucleotide sequence of pMCAS(Sync1-MS)dsRed in GenBank format. The sequence is compatible with common text editors or can be directly imported to appropriate software (Vector NTi, SnapGene, etc.).
DOI: 10.6084/m9.figshare.4307183.v1
title: NEON Teaching Data: Imaging Spectrometer Data HDF5

description: The hyperspectral remote sensing data in this HDF5 file were collected over the San Joaquin field site located in California (Domain 17) and processed at NEON headquarters. The NEON imaging spectrometer sensor <br>collected data within 428 bands.<br>This teaching data set is used for several tutorials on the NEON website (neonscience.org). The dataset is for educational purposes, data for research purposes can be obtained from the NEON Data Portal (data.neonscience.org).<br>
DOI: 10.25378/janelia.13270466.v2
title: Ground-truth segmentation data used for training Cellpose

description: This dataset primarily contains images of cells from a large variety of fluorescent markers and image modalities, as well as ground truth segmentations. The dataset also contains a few images of non-cell biological structures and other natural images that can be naturally segmented into repetitive structures. In some cases the nucleus is labelled in a secondary blue channel. <br>The dataset was used to train the Cellpose segmentation algorithm, and can be accessed at https://www.cellpose.org/dataset. <br><br>For a complete description of the dataset, see the related paper: Cellpose: a generalist algorithm for cellular segmentationCarsen Stringer, Tim Wang, Michalis Michaelos, Marius PachitariubioRxiv 2020.02.02.931238; doi: https://doi.org/10.1101/2020.02.02.931238
DOI: 10.3535/haz-f2e-ybl
title: †Diplotrypa Nicholson, 1879

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nzt-d6z-a6d
title: †Dianulites Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1293037.v1
title: Wood ant line transect data

description: Wood ant line transect data<br>=========================== Data used in paper "Mixture models for distance sampling detection functions" by David L. Miller and Len Thomas. Taken from Borkin et al (2012) and provided by Kerry Borkin. Data are line transect observations of 144 wood ant (Formica lugubris and Formica aquilonia) nests in Abernethy Forest, Scotland. Both distance to ant nests and other covariates were collected. Survey details<br>============== Adapted from Borkin et al (2012): Surveys took place on 13 days between between 22 August and 9 September 2003 using a line transect protocol on 17 transects in the Abernethy Forest, Scotland (57°15 ́N, 3°40 ́W). Data format<br>=========== Comma separated value file with one row for each of the 144 observations, each with the following 7 columns: habitat : 4 level stand type: "stand initiation", "stem exclusion", "understorey re-initiation" and "old-growth".<br>transect : ID of the transect where the observation was made.<br>distance : Exact perpendicular distances to observed ant nests in metres.<br>nest.size : Size of nest, calculated as half-width multiplied by height.<br>species : Factor with 2 levels ("aqu" and "lug") giving the ant species.<br>object : Unique observation identifier.<br>detected : Column of 1s indicated that the individual was observed (needed for analysis software). References<br>========== Borkin, KM, RW Summers, and L Thomas. Surveying Abundance and Stand Type Associations of Formica Aquilonia And F. Lugubris (Hymenoptera: Formicidae) Nest Mounds Over an Extensive Area: Trialing a Novel Method. European Journal of Entomology 109, no. 1 (2012): 47–53.
DOI: 10.17632/sgw6tw8jvm
title: The Construction of Ecological Corridors under the Impact of Traffic: A Case Study of Ningxia Hui Autonomous Region, China

description: Research Assumptions
This study posits that transportation infrastructure significantly impacts the Ningxia region's ecosystem in terms of landscape, processes, and functions. Specifically, it may alter land use patterns, disrupt ecosystem processes, and change ecosystem functions. By strategically planning and constructing ecological corridors, we can mitigate these negative effects, enhance ecosystem connectivity, and boost biodiversity.

Data Display Content

The dataset encompasses:

Model Screenshots: Software modeling visually illustrates processing methods, aiding interested scholars.
Process Screenshots: These depict the full workflow, from data collection and model building to result analysis, including constructing a comprehensive resistance surface with factors like land use, elevation, and slope, as well as extracting and grading ecological corridors.
Raw Data: Comprises Ningxia's land use, elevation, slope, and transportation network data, sourced from remote sensing, GIS databases, and government statistics.
Result Data: Features ecological corridor distribution maps, ecological source area identification, connectivity and sensitivity assessments, and land use predictions. Optimized corridor layouts notably facilitate species exchange and migration, supporting sustainable development.

Data Explanation and Usage

Data Explanation: Interpretation requires considering Ningxia's unique ecology and transportation context. For instance, when assessing corridor connectivity, account for the region's complex terrain and dense transportation network. Also, recognize varying impacts on different ecosystems, like forests versus grasslands.
Data Usage: The dataset informs ecological corridor planning in Ningxia. Planners can use corridor distribution maps to avoid conflicts with transportation infrastructure and leverage ecological source area data to bolster protection, ensuring corridor effectiveness and sustainability.
DOI: 10.3535/nzh-nfk-s03
title: †Anaphragma mirabile cognatum Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/st3-fyj-76b
title: †Eridotrypa Ulrich, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21453984.v1
title: Dataset 1.sav

description: This is the raw data that I used to research my latest artice.
DOI: 10.17632/s3z5zd4j7c
title: Data for: Traffic Generated by Mixed-Use Developments—a Follow-Up 31-Region Study

description: This dataset includes the boundaries of mixed-used developments studied in the research "Traffic Generated by Mixed-Use Developments—a Follow-Up 31-Region Study".
DOI: 10.3535/pwt-839-5gn
title: †Hallopora Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ytc-4s8-sca
title: †Pachydictya Ulrich, 1882

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3pg-rql-xv5
title: †Revalopora Vinassa de Regny, 1921

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6tc-99r-1dp
title: †Lioclemella Foerste, 1895

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14135564.v1
title: Mediterranean seagrass amphipod

description: Dataset in excel format including:1. Distributional data2. Traits3. Environmental characterization of study localities4. Least-cost distance matrix<br>Omissis: Part of the data used in this meta-analysis have been previously published as open access in GBIF (<i>AxIOM: Amphipod crustaceans from insular Posidonia oceanica seagrass meadows </i>- https://www.gbif.org/dataset/b146a93c-657b-4768-aa51-9cabe3dac808 - DOI10.15468/nnjtke). This data set includes occurence/presence but also densities and associated metadata.<br>Other source of data can be found here: http://www.vliz.be/en/imis?module=dataset&dasid=6658<br>
DOI: 10.6084/m9.figshare.28330010.v1
title: Dataset for latent class analysis of self-regulated learning

description: These datasets are linked to the research on the impact of self-regulated learning on MALL engagement and language performance. The datasets include both survey data and observed language measures.
DOI: 10.3535/apj-b32-1bd
title: †Heterotrypa praenuntia (Ulrich, 1893)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/esx-xk5-h1f
title: †Batostoma granulosum Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/6vfmgc9x4w
title: Out-of-bed extubation in sedentary position possible? Case report

description: Abstract
Introduction: The withdrawal of ventilatory support is usually carried out in bed; sometimes patients can be extubated outside the usual sitting position in special cases; benefiting early mobilization which is associated with reducing hospital stay and improving functionality. Case description: 39-year-old female patient diagnosed with chronic kidney disease and requiring dialysis in the context of ventilatory failure due to emergency orotracheal intubation, after a favorable evolution, early mobilization is initiated and she is released from ventilatory support in a chair. Conclusion: Out-of-bed release so far has not been associated with complications, in our case it was successfully achieved avoiding unnecessary bed rest.
Keywords: Early mobilization; Mechanical ventilation; Intensive care; Weaning; Tracheal
extubation.
DOI: 10.17632/v36fvgzzn2
title: Exploring two-photon optogenetics beyond 1100 nm for specific and effective all-optical physiology

description: Two-photon (2-P) all-optical approaches combine in vivo 2-P calcium imaging and 2-P optogenetic modulations. Here, firstly, we combined in vivo juxtacellular recordings and GCaMP6f-based 2-P calcium imaging in mouse visual cortex to tune our detection algorithm towards a 100% specific identification of action potential-related calcium transients. Secondly, we minimized photostimulation artifacts by using extended-wavelength-spectrum laser sources for optogenetic stimulation. We achieved artifact-free all-optical experiments performing optogenetic stimulation from 1100 nm to 1300 nm. Thirdly, we determined the spectral range for maximizing efficacy until 1300 nm. The rate of evoked transients in GCaMP6f/C1V1-co-expressing cortical neurons peaked already at 1100 nm. By refining spike detection and defining 1100 nm as the optimal wavelength for artifact-free and effective GCaMP6f/C1V1-based all-optical physiology, we increased the translational value of these approaches, e.g., for the development of network-based therapies.
DOI: 10.3535/6cq-v7f-50h
title: †Esthoniopora communis Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8bb-zmy-0df
title: †Oanduella bassleri Männil, 1958

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tvz-g1p-4wv
title: †Dianulites petropolitanus Dybowski, 1877 ()

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26390911.v1
title: Metric scores

description: Raw metrics scores from the feature selection for scRNA-seq integration benchmark. Each file contains scores for one experiment that forms part of the benchmark.
DOI: 10.3535/ene-e2y-883
title: †Favositella Etheridge & Foord, 1884

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k1z-wzx-m78
title: †Eridotrypa aedilis (Eichwald, 1855)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1y8-hdn-9v2
title: †Stigmatella massalis Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/swb-erd-g6q
title: †Dittopora colliculata (Eichwald, 1856)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25093712.v4
title: Short excitonic lifetimes of MoSe2 monolayers grown by molecular beam epitaxy on the hexagonal boron nitride

description: Raw data from the publication "Short excitonic lifetimes of MoSe2 monolayers grown by molecular beam epitaxy on the hexagonal boron nitride", Kacper Oreszczuk <i>et al</i> 2024 <i>2D Mater.</i> <b>11</b> 025029, https://doi.org/10.1088/2053-1583/ad3135
DOI: 10.6084/m9.figshare.5687356.v2
title: LENS phytoplankton data

description: Phytoplankton data from the Lake Ecosystem Nanosilver Project at IISD-ELA
DOI: 10.17632/gxtn27jr29
title: Source data for figures in paper Discovery of antibiotics in the archaeome using deep learning

description: Source data for figures in paper Discovery of antibiotics in the archaeome using deep learning
DOI: 10.3535/515-krz-cdd
title: †Stictoporellina Nekhoroshev, 1956

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/732-pph-81p
title: †Diplotrypa petropolitana Nicholson, 1879

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12356270.v1
title: Pesticide and lung cancer

description: Datasets for the study of pesticide exposure and lung cancer risk, a case-control study in Nakhon Sawan, Thailand.<br>
DOI: 10.6084/m9.figshare.28156964.v1
title: DataS1_Database

description: We assessed the species-specific response of 14 arboreal and ground mammals to landscape-scale forest loss and fragmentation measured across different scales in the Lacandon rainforest, Mexico. Most species (6 of 14 species, 43%) were weakly related to forest loss, or positively associated with it (7 of 14, 50%), likely because in this young agricultural frontier some individuals can crowd in the remaining forest patches. Only the Geoffroy’s spider monkey was negatively impacted by forest loss. We did not find evidence of extinction thresholds (nonlinear responses to forest loss) in any species. Only in four species fragmentation <i>per se</i> provided a slightly better fit to the data, but its effect was non-significant. Our multiscale analysis revealed that the scale of effect of forest loss and fragmentation was independent of body mass and habitat use (arboreal vs. ground).
DOI: 10.3535/g4b-01y-xdn
title: †Batostoma granulosum Bassler, 1911

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/djf4fkgp5w
title: Conboy_Animals_AssocDiarrhea_dataset

description: The dataset for the manuscript "Associations between Feeding Behaviors Collected from an Automated Milk Feeder and Neonatal Calf Diarrhea in Group Housed Dairy Calves: A Case-Control Study"

DOI: 10.3390/ani12020170
DOI: 10.3535/2ke-xel-b4b
title: †Enallopora perantiqua (Hall, 1847)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s5s-nza-4x6
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hc0-9ce-hpf
title: †Anolotichiina crassimuralis (Bassler, 1911)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jrt-b7c-fa5
title: †Moyerella francisca (Bassler, 1911)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.6739271.v2
title: Case data for "Determination of Transfer Capacity Region in Electric Market: Theory and Analysis"

description: IEEE 14-bus and IEEE 118-bus test systems
DOI: 10.3535/17z-p22-e4g
title: †Homotrypa similis Foord, 1883

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7jq-00g-xv3
title: †Revalotrypa gibbosa (Bassler, 1911)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14141411.v1
title: STOP-HCV-1 trial data

description: Contains data from the STOP-HCV-1 trial examining a mechanism for shortening DAA HCV treatment based on baseline viral load. Contains baseline demographics, outcomes and VL results
DOI: 10.6084/m9.figshare.21543333.v2
title: Syphilis_Genomic_Epi_England_2022-23

description: Genomic and epidemiological analysis of Treponema pallidum genomes from UK (English) patients, 2012-2018.
DOI: 10.17632/7rxjffdx24
title: Oman peridotite carbonation data

description: Analytical data of solid and fluids from the experimental study of Oman harzburgite carbonation
DOI: 10.3535/pbq-ncd-8td
title: †Diplotrypa Nicholson, 1879

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/psz-szv-90l
title: †Capillapora Pushkin, 1987

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/mcckfhybhj
title: Data for: The Surface Distributions of the Production of the Major Volatile Species, H2O, CO2, CO and O2, from the Nucleus of Comet 67P/Churyumov-Gerasimenko throughout the Rosetta Mission as Measured by the ROSINA Double Focusing Mass Spectrometer

description: The file MIRO_Columns.txt contains the column densities and their uncertainties corresponding to the results published previously in the paper by Marshall, D.W., Hartogh, P. Rezac, L. von Allmen, P., Biver, N., Bockelée-Morvan, D., Crovisier, J., Encrenaz, P. Bulkis, S. Hofstadter, M. Ip, W.-H., Jarchow, C. Lee, S., Lellouch, E. 2017. Spatially resolved evolution of the local H2O production rates of coet 67P/Churyumov,Gerasimenko, from the MIRO instrument of Rosetta. Astronomy & Astrophysics 603, A87. The format containes space delimited columns corresponding to Date, UT time, Heliocentric Distance (AU), column density (cm^-2), column density error (cm^-2).
DOI: 10.3535/8j5-y8f-8km
title: †Revalopora Vinassa de Regny, 1921

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mxn-6qz-smx
title: †Revalopora revalensis (Dybowski, 1877)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14553732.v1
title: Data sets featured in the manuscript proposing the GEG distribution for the modelling of RT data

description: · =The file adhd.simple_rt contains the data set by Osmon et al 2018<br> · =The file fig 4b (veit et al 2014) contains the data set by Veit et al 2014<br> · =The file figure_6b contains the data set by Fazlali et al 2016<br> · = The file monkey_data contains the data set by Kuang et al 2016<br> · =The file fig_2f_schledde.et.al.2017 contains the data set by Schledde et al 2017<br>
DOI: 10.6084/m9.figshare.28628906.v1
title: DFI-TI.dta

description: This study employs panel data to investigate how digital financial inclusion impacts the urban-rural income gap.
DOI: 10.3535/bfh-vnf-6pb
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m92-520-31q
title: †Anolotichiina laciniata (Eichwald, 1860)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.