cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.31286467.v1
title: Estimating heritability of survival traits using censored multiple variance component model

description: Characterizing the genetic basis of survival traits, such as age at disease onset, is critical for risk stratification, early intervention, and elucidating biological mechanisms that can inform therapeutic development. However, time‐to‐event outcomes in human cohorts are frequently right‐censored, complicating both the estimation and partitioning of total heritability. Modern biobanks linked to electronic health records offer the unprecedented power to dissect the genetic basis of age-at-diagnosis traits at large scale. Yet, few methods exist for estimating and partitioning the total heritability of censored survival traits. Existing methods impose restrictive distributional assumptions on genetic and environmental effects and are not scalable to large biobanks with a million subjects. We introduce a censored multiple variance component model to robustly estimate the total heritability of survival traits under right-censoring. We demonstrate through extensive simulations that the method provides accurate total heritability estimates of right-censored traits at censoring rates up to $80\%$ given sufficient sample size. The method is computationally efficient in estimating one hundred genetic variance components of a survival trait using large-scale biobank genotype data consisting of a million subjects and a million SNPs in nine hours, including uncertainty quantification. We apply our method to estimate the total heritability of four age-at-diagnosis traits from the UK Biobank study. Our results establish a scalable and robust framework for heritability analysis of right-censored survival traits in large-scale genetic studies.
DOI: 10.5281/zenodo.6359686
title: Global Daily Surface Blue-sky Albedo Climatology and Land Cover Climatology Dataset from 20-year MODIS Products (500m)

description: Only the first days of each month were uploaded to Zenodo due to the data storage limitation, and the full dataset is available at http://glass.umd.edu/albedo_clim/.


Surface albedo plays a critical role in climate, hydrological, and biogeochemical modeling and weather forecasting. Therefore, precisely mapping surface albedo climatology globally is necessary to better parameterize environmental systems. We generated a new global surface blue-sky actual and snow-free albedo climatology dataset from 20-year MODIS products from the Google Earth Engine (GEE). 


The 500m global surface blue-sky daily albedo climatology dataset follows the basic MODIS product format and employed the sinusoidal projection.  It includes historical and snow-free blue-sky albedo climatology data. For application convenience, the land cover climatology of MODIS product (MCD12Q1) is also generated and attached. The International Geosphere-Biosphere Programme (IGBP) and PFT classification climatology of MCD12Q1 since 2001 were also generated.
description: The full dataset (365 days) is freely available at http://glass.umd.edu/albedo_clim/. The surface albedo climatology of CMG format (0.05° and 0.5 °) are published separately at (https://doi.org/10.5281/zenodo.6350821
).
DOI: 10.5281/zenodo.5113689
title: Global Daily Surface Blue-sky Albedo Climatology and Land Cover Climatology Dataset from 20-year MODIS Products (500m)

description: Only the first days of each month were uploaded to Zenodo due to the data storage limitation, and the full dataset is available at http://glass.umd.edu/albedo_clim/.


Surface albedo plays a critical role in climate, hydrological, and biogeochemical modeling and weather forecasting. Therefore, precisely mapping surface albedo climatology globally is necessary to better parameterize environmental systems. We generated a new global surface blue-sky actual and snow-free albedo climatology dataset from 20-year MODIS products from the Google Earth Engine (GEE). 


The 500m global surface blue-sky daily albedo climatology dataset follows the basic MODIS product format and employed the sinusoidal projection.  It includes historical and snow-free blue-sky albedo climatology data. For application convenience, the land cover climatology of MODIS product (MCD12Q1) is also generated and attached. The International Geosphere-Biosphere Programme (IGBP) and PFT classification climatology of MCD12Q1 since 2001 were also generated.
description: The full dataset (365 days) is freely available at http://glass.umd.edu/albedo_clim/. The surface albedo climatology of CMG format (0.05° and 0.5 °) are published separately at (https://doi.org/10.5281/zenodo.6350821
).
DOI: 10.15468/dl.uddya5
title: Occurrence Download

description: A dataset containing 487579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scomber",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 487579 records from 419 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017578-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3pbr4u
title: Occurrence Download

description: A dataset containing 3277 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Primula minima, Primula minima)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 3277 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017588-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jg29rs
title: Occurrence Download

description: A dataset containing 21179 records in GBIF matching the query:

 SELECT gbifid, datasetkey, specieskey, kingdom, phylum, class, "order", family, genus, species, scientificname, decimallatitude, decimallongitude, eventdate, institutioncode, "year" AS obs_year, basisofrecord, coordinateuncertaintyinmeters, issue
 FROM occurrence
 WHERE
 decimallatitude IS NOT NULL
 AND decimallongitude IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND coordinateuncertaintyinmeters IS NOT NULL
 AND coordinateuncertaintyinmeters &gt; 0
 AND coordinateuncertaintyinmeters &lt;= 200.0
 AND decimallatitude &gt;= -20.3845909579754
 AND decimallatitude &lt;= -16.25916876999866
 AND decimallongitude &gt;= -62.307629233515655
 AND decimallongitude &lt;= -56.27861780887036
 AND GBIF_Within('POLYGON ((-56.278618 -20.384591, -56.278618 -16.259169, -62.307629 -16.259169, -62.307629 -20.384591, -56.278618 -20.384591))', decimallatitude, decimallongitude) = TRUE
 

 The dataset's 21179 records were derived from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017585-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7mqqex
title: Occurrence Download

description: A dataset containing 36250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Primula veris, Primula veris, Primula veris, Primula officinalis, Primula officinalis)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 36250 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017592-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8ckr9
title: Occurrence Download

description: A dataset containing 14370 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Prosapia bicincta"
 ]
}

 The dataset includes 14370 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017593-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.engtqh
title: Occurrence Download

description: A dataset containing 19774 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Prunella grandiflora, Prunella grandiflora, Prunella grandiflora, Prunella grandiflora)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 19774 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017594-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kangqd
title: Occurrence Download

description: A dataset containing 413272 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is DATAVES"
 ]
}

 The dataset includes 413272 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017589-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/zt63gyk5bf
title: Species composition of soil seed bank and aboveground vegetation in Momoge wetland

description: Species composition of soil seed bank and aboveground vegetation in Momoge wetland.
DOI: 10.17632/zt63gyk5bf.1
title: Species composition of soil seed bank and aboveground vegetation in Momoge wetland

description: Species composition of soil seed bank and aboveground vegetation in Momoge wetland.
DOI: 10.17632/yynmkdfsbz
title: PICC catheter with Kitelock solution

description: This dataset comprises biochemical and hematological laboratory values collected from critically ill patients to evaluate the effect of Kitelock catheter lock solution on laboratory markers. The aim of this study is to determine the volume of blood that needs to be drawn before laboratory analyses are no longer influenced by residual Kitelock solution. The dataset supports research on identifying potential interference in laboratory values and establishing guidelines for accurate blood sampling after catheter locking.

Research Hypothesis:

This study hypothesizes that residual Kitelock catheter lock solution can influence specific biochemical and hematological laboratory markers. By determining the volume of blood that needs to be discarded before accurate lab analyses can be performed, the study aims to provide evidence-based recommendations for blood sampling in clinical practice.

Dataset Variables:

Identification of samples:

patient_ID - annonymous identifier of the patient
tube_order - order of draw of tubes 1 is the first tube, 5 is the last (reference) tube
tube_type - one of the 3 possible tubes (K3EDTA tube [denoted as K3EDTA]; Sodium citrate tube [denoted as Citrate]; Lithium heparin tube [denoted as LiHep]) or "exclude" if the patient was excluded from the study
note - the reason for excluding the patient from the study


Biochemical markers:

Alkaline phosphatase (S_ALP, µkat/L)
Total protein (S_PROT, g/L)
Albumin (S_ALB, g/L)
Urea (S_UREA, mmol/L)
Creatinine (S_KREA)
Sodium (S_Na, mmol/L)
Potassium (S_K, mmol/L)
Chloride (S_Cl, mmol/L)
Calcium (S_Ca, mmol/L)
Osmolality (S_OSM, mmol/kg)
Magnesium (S_Mg)
Qualitative hemolysis, chylomicrons, and icterus indicators (S_kHEM, S_kCHYL, S_kIKT)

Hematological markers:

Leukocytes (B_LEU, x 10⁹/L)
Erythrocytes (B_ERY, x 10¹²/L)
Hemoglobin (B_HGB, g/L)
Hematocrit (B_HCT, fraction of total)
Mean corpuscular volume (B_MCV, fL)
Mean corpuscular hemoglobin (B_MCH, pg)
Mean corpuscular hemoglobin concentration (B_MCHC, g/L)
Platelets (B_TRB, x 10⁹/L)
Red cell distribution width (B_RDW, fraction of total)
Mean platelet volume (B_MPV, fL)

Coagulation markers:

Activated partial thromboplastin time (P_APTT, s)
APTT ratio (P_APTR)
Prothrombin time (P_PT_s, s)
Prothrombin ratio (P_PT_R)
International normalized ratio (P_INR)
Thrombin clotting time (P_TC, s)
Thrombin clotting ratio (P_TC_R)
Fibrinogen (P_FB)

Data Collection and Interpretation:

The data were collected from routine laboratory tests conducted in an intensive care setting, with a focus on laboratory markers that can be influenced by ethylenediaminetetraacetic acid (EDTA), the main component of Kitelock catheter lock solution. By analyzing these markers, the study aims to determine the extent to which residual EDTA affects laboratory results and establish guidelines for appropriate blood sampling volumes.
DOI: 10.17632/yynmkdfsbz.1
title: PICC catheter with Kitelock solution

description: This dataset comprises biochemical and hematological laboratory values collected from critically ill patients to evaluate the effect of Kitelock catheter lock solution on laboratory markers. The aim of this study is to determine the volume of blood that needs to be drawn before laboratory analyses are no longer influenced by residual Kitelock solution. The dataset supports research on identifying potential interference in laboratory values and establishing guidelines for accurate blood sampling after catheter locking.

Research Hypothesis:

This study hypothesizes that residual Kitelock catheter lock solution can influence specific biochemical and hematological laboratory markers. By determining the volume of blood that needs to be discarded before accurate lab analyses can be performed, the study aims to provide evidence-based recommendations for blood sampling in clinical practice.

Dataset Variables:

Identification of samples:

patient_ID - annonymous identifier of the patient
tube_order - order of draw of tubes 1 is the first tube, 5 is the last (reference) tube
tube_type - one of the 3 possible tubes (K3EDTA tube [denoted as K3EDTA]; Sodium citrate tube [denoted as Citrate]; Lithium heparin tube [denoted as LiHep]) or "exclude" if the patient was excluded from the study
note - the reason for excluding the patient from the study


Biochemical markers:

Alkaline phosphatase (S_ALP, µkat/L)
Total protein (S_PROT, g/L)
Albumin (S_ALB, g/L)
Urea (S_UREA, mmol/L)
Creatinine (S_KREA)
Sodium (S_Na, mmol/L)
Potassium (S_K, mmol/L)
Chloride (S_Cl, mmol/L)
Calcium (S_Ca, mmol/L)
Osmolality (S_OSM, mmol/kg)
Magnesium (S_Mg)
Qualitative hemolysis, chylomicrons, and icterus indicators (S_kHEM, S_kCHYL, S_kIKT)

Hematological markers:

Leukocytes (B_LEU, x 10⁹/L)
Erythrocytes (B_ERY, x 10¹²/L)
Hemoglobin (B_HGB, g/L)
Hematocrit (B_HCT, fraction of total)
Mean corpuscular volume (B_MCV, fL)
Mean corpuscular hemoglobin (B_MCH, pg)
Mean corpuscular hemoglobin concentration (B_MCHC, g/L)
Platelets (B_TRB, x 10⁹/L)
Red cell distribution width (B_RDW, fraction of total)
Mean platelet volume (B_MPV, fL)

Coagulation markers:

Activated partial thromboplastin time (P_APTT, s)
APTT ratio (P_APTR)
Prothrombin time (P_PT_s, s)
Prothrombin ratio (P_PT_R)
International normalized ratio (P_INR)
Thrombin clotting time (P_TC, s)
Thrombin clotting ratio (P_TC_R)
Fibrinogen (P_FB)

Data Collection and Interpretation:

The data were collected from routine laboratory tests conducted in an intensive care setting, with a focus on laboratory markers that can be influenced by ethylenediaminetetraacetic acid (EDTA), the main component of Kitelock catheter lock solution. By analyzing these markers, the study aims to determine the extent to which residual EDTA affects laboratory results and establish guidelines for appropriate blood sampling volumes.
DOI: 10.17632/p44sd7dwzk
title: Mtg16/Eto2 tumor suppressor maintains and establishes repression by distinct mechanisms

description: This dataset contains raw microscopy and western blot images associated with Gilbert et al., 2025.
DOI: 10.17632/p44sd7dwzk.1
title: Mtg16/Eto2 tumor suppressor maintains and establishes repression by distinct mechanisms

description: This dataset contains raw microscopy and western blot images associated with Gilbert et al., 2025.
DOI: 10.15468/brd5p8
title: Two New Species of Crayfish of the Genus Cherax (Crustacea, Decapoda, Parastacidae) from Western and Eastern Indonesian New Guinea

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lukhaup, Christian, Eprilurahman, Rury, von Rintelen, Thomas (2024): Two New Species of Crayfish of the Genus Cherax (Crustacea, Decapoda, Parastacidae) from Western and Eastern Indonesian New Guinea. Arthropoda 2 (4): 264-293, DOI: 10.3390/arthropoda2040019, URL: https://doi.org/10.3390/arthropoda2040019Abstract: Two new species of the genus Cherax are described and illustrated. Cherax rayko n. sp., endemic to the Bian River drainage basin in the Muting District, in the northern part of the Merauke Regency, South Papua, Indonesia, is described, figured, and compared with its closest relatives, Cherax alyciae, Lukhaup, Eprilurahman & von Rintelen, 2018, and Cherax peknyi Lukhaup & Herbert, 2008. The new species may be easily distinguished from both by the shape of the rostrum, the shape of the chelae, the shape of the scaphocerite, and the coloration. Cherax phing n. sp., endemic to the Kali Ombak River drainage basin in the western part of the Kepala Burung (Vogelkop) Peninsula, Southwest Papua, Indonesia, is described, figured, and compared with its closest relatives, Cherax pulcher Lukhaup, 2015a, Cherax boesemani Lukhaup & Pekny, 2008, Cherax wagenknechtae Lukhaup and Eprilurahman, 2022, and Cherax gherardii Patoka, Bláha & Kouba, 2015. The new species may be easily distinguished from the latter species by the shape of the chelae, rostrum, and body and by the coloration. A molecular phylogeny based on a mitochondrial gene fragment, 16S, supports the morphology-based description of the two new species, which can also be clearly distinguished by sequence differences.
DOI: 10.15468/dl.ghxpfk
title: Occurrence Download

description: A dataset containing 2443 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tapirus pinchaque"
 ]
}

 The dataset includes 2443 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017596-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ub8k6s
title: Occurrence Download

description: A dataset containing 240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Prunella laciniata, Prunella laciniata, Prunella laciniata, Prunella laciniata)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 240 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017597-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/599hn5
title: Taxonomy of the ant genus Cerapachys Smith, 1857 (Hymenoptera: Formicidae) in China with description of a new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Liu, Cong, Garcia, Francisco Hita, Peng, Yan-Qiong, Pierce, Naomi E. (2024): Taxonomy of the ant genus Cerapachys Smith, 1857 (Hymenoptera: Formicidae) in China with description of a new species. Asian Myrmecology (e 017001) 17: 1-7, DOI: 10.20362/am.017001, URL: http://dx.doi.org/10.20362/am.017001ABSTRACT. In this study, we update the taxonomy of the ant genus Cerapachys in China. A recent survey of the leaf litter ant fauna in the Hengduan Mountains yielded a hitherto unknown species of Cerapachys, which we describe here as Cerapachys zhengyangwangi sp. nov. This new species is clearly distinguishable from all the other species in the genus. We provide an updated identification key of the genus Cerapachys based on the worker caste, as well as a diagnostic discussion and high-quality specimen images.
DOI: 10.5281/zenodo.18510037
title: Logs and evalutation results for the Applied Machine Learning Seminar at University of Wuppertal WS25/26

description: Contains the full logs of all runs and the evaluation results, the code can be found on github: https://github.com/Mechanized00/AppliedRLSeminarJK
DOI: 10.5281/zenodo.18510036
title: Logs and evalutation results for the Applied Machine Learning Seminar at University of Wuppertal WS25/26

description: Contains the full logs of all runs and the evaluation results, the code can be found on github: https://github.com/Mechanized00/AppliedRLSeminarJK
DOI: 10.15468/dl.zdvb4z
title: Occurrence Download

description: A dataset listing the 168 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-74.10326 4.76868,-74.09449 4.76868,-74.09449 4.7751,-74.10326 4.7751,-74.10326 4.76868))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chordata"
 ]
}

 The dataset's 168 records were derived from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017584-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.569k4s
title: Occurrence Download

description: A dataset containing 23483 records in GBIF matching the query:

 SELECT gbifid, datasetkey, specieskey, kingdom, phylum, class, "order", family, genus, species, scientificname, decimallatitude, decimallongitude, eventdate, institutioncode, "year" AS obs_year, basisofrecord, coordinateuncertaintyinmeters, issue
 FROM occurrence
 WHERE
 decimallatitude IS NOT NULL
 AND decimallongitude IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND coordinateuncertaintyinmeters IS NOT NULL
 AND coordinateuncertaintyinmeters &gt; 0
 AND coordinateuncertaintyinmeters &lt;= 200.0
 AND decimallatitude &gt;= -20.3845909579754
 AND decimallatitude &lt;= -16.25916876999866
 AND decimallongitude &gt;= -57.11532679738935
 AND decimallongitude &lt;= -51.16237982624578
 AND GBIF_Within('POLYGON ((-51.162380 -20.384591, -51.162380 -16.259169, -57.115327 -16.259169, -57.115327 -20.384591, -51.162380 -20.384591))', decimallatitude, decimallongitude) = TRUE
 

 The dataset's 23483 records were derived from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017595-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.