cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14305874.v1
title: Finite Element Analysis of Nylon Based 3D Printed Autonomous Underwater Vehicle Propeller

description: Abstract The recent developments in the additive manufacturing to manufacture complex cost effective profiles is gaining popularity to test the strength of developed products through finite element method (FEM). Finite element analysis (FEA) is a potent tool for mechanical analysis. The combination of 3D printing and FEA is opening new opportunities to go further in the complexity of the product geometry. The autonomous underwater vehicle (AUV) propeller blade has a complex profile with multi-directional gradient and twist, which requires a multi-stage operation to manufacture, including the hubs. The AUV propeller is required to withstand the applied load and generate the required thrust to move AUV at the desired speed. The current study explores the performance of AUV propeller prepared by additive synthesis using Nylon 6 material. The design of the propeller blade was developed using SOLID WORKS and integrated to the CUBPRO (DUO) to obtain the required 3D printing parameters. A comparative investigation is made for Nylon material within the dimensional conformance with the 3D printed propeller blade. The stress-strain analysis of the Nylon AUV propeller is carried with the FEM. The analysis of error and the stress show that the Nylon material meets the performance criteria for AUV propeller.
DOI: 10.6084/m9.figshare.22132946.v1
title: Stephenson Covid-19 PBMC 2021 BCR

description: Dataset published by Stephenson et al. 2021, which contains transcriptome sequencing for over 750,000 Peripheral Blood Mononuclear Cells (PBMC) from 130 patients in the context of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2). <br> The dataset was chosen as an example of a large-scale single cell dataset including VDJ-Sequencing, that is well known to the community. It contains over 150,000 B-Cells and 200,000 T-Cells with IR annotation, that we will regard in this analysis tutorial. <br> The dataset available under this link contains the BCR part. Citation Stephenson, E., Reynolds, G., Botting, R.A. <em>et al.</em> Single-cell multi-omics analysis of the immune response in COVID-19. <em>Nat Med</em> <strong>27</strong>, 904–916 (2021). https://doi.org/10.1038/s41591-021-01329-2 Manuscript link https://www.nature.com/articles/s41591-021-01329-2 Original data link https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-10026/E-MTAB-10026.processed.1.zip
DOI: 10.6084/m9.figshare.27325698.v2
title: Dataset of Reinforcement and Width Estimation in GMAW Weld Bead Process

description: In the first CSV file, named 'data.csv', the first columns describe the timestamp of the acquisition in hour:minute:second miliseconds format starting from the hour the experiment was registered, a Boolean flag for when Arc is open or closed, the position of the torch in mm, its speed in mm/s, voltage in Volts, current in Amperes, and wire-feed speed in m/min. The follow columns are the pixels of the thermographic image, with each row corresponding to a different measurement and a different image. This way, each column starting from "1x1" column represents the XY axes pixel values. The second CSV file, named 'scan.csv', contains 181 columns. The first 2 columns are related to the values of calibration of height and width of each pixel in the image. The follow three columns are the position of the sample, the width and the reinforcement. The remaining rows contain the measured pixels from the laser beam line. Each row corresponds to a different measurement and a different position of scanning. The data.cnf file contains essential information about the test parameters under which the data, later recorded in data.csv, was collected. Meanwhile, the data.stm file stores the sequence of stimuli transmitted to the welding source during the experiment. In this file, it is possible to see four lines of information regarding the steps of the experiment. The first number in each line is the step identification, followed by Welding Speed(mm/s), Welding Voltage(V), Wire feed speed (m/min) and Arc status (boolean). Both of these files are used in the Thermo Data Welding software. The met-data.dat file has the data regarding the profile of penetration as seen in a macrograpric analysis. It is composed by two rows: The first one is related to the data processing configuration values such as height in the left side (mm), height in the right side (mm), total length of the part (mm), pixels for the gausian filter, pixel thresholds and pixel cleaning kernel. The following row has the data for the penetration profile itself in an array.
DOI: 10.6084/m9.figshare.9948578
title: Supplementary Material for: Acute Paralytic Post-Bariatric Surgery Axonal Polyneuropathy: Clinical Features and Outcome

description: <b><i>Introduction:</i></b> The syndrome of post-bariatric surgery axonal polyneuropathy (PAP) may present with various sensory and motor symptoms including paralysis. We aim to describe the diagnostic features and outcome of treatment of the acute paralytic form of PAP (acute paralytic PAP [APPAP]) as it was not described in a separate cohort previously. <b><i>Methods:</i></b> We retrospectively reviewed medical charts and described the clinical, electrodiagnostic features, treatment, and outcome for patients who presented to our clinical neurophysiology unit with disabling weakness within 24 months post-bariatric surgery. The main outcome measure was the percent of patients who are able to walk independently at the last visit and comparing the group who resumed walking independently at 6 months to the group who did not, in regards to the use of intravenous immunoglobulin (IVIg). <b><i>Results:</i></b> Thirteen patients were included (10 women and 3 men) with a mean age of 29.8 years (SD 12.5). All presented with loss of ambulation resembling Guillain-Barre Syndrome. The median time of onset was 4 months (interquartile range [IQR] 3–6) post-surgery, and the median time to weakness nadir was 3 weeks (IQR 3–3.5) with an average weight loss of 38.6 kg (SD 17.09). All patients regained their ability to ambulate; however, the ability to walk independently was achieved in 66.7% of patients. The percent of patients who were able to ambulate independently at 6 months were 16% with IVIg versus 66.7% without IVIg. <b><i>Conclusion:</i></b> The syndrome of ­APPAP develops in the first-year post-bariatric surgery. The majority of patients regain independent ambulation.
DOI: 10.60893/figshare.pof.28513541.v1
title: Detailed parameters of LAR model

description: This file is the supplementary material for the detailed rate coefficients of the reduced model in section 4
DOI: 10.6084/m9.figshare.14884764.v1
title: Supplementary Material for: p53 Mutation at Serine 249 and Its Gain of Function Are Highly Related to Hepatocellular Carcinoma after Smoking Exposure

description: <b><i>Background:</i></b> It has been convincingly suggested that a close correlation exists between the incidence of hepatocellular carcinoma (HCC) and cigarette smoking. However, the underlying effect of smoking on HCC is not clear. <b><i>Methods:</i></b> A binary unconditional logistic regression was used for the data on a total of 300 cases and 612 controls. The approach of functional analysis of separated alleles in yeast and direct sequencing of TP53 mutations were applied to analyze the p53 status in the HCC group. The relationship between p53 mutation at serine 249 (p53-RS) and smoking was assessed. Quantitative reverse transcription PCR was employed for the evaluation to transcriptional activity of p53 and p53-RS. <b><i>Results:</i></b> Smoking was linked to the risk of HCC with an increased dose-response effect. Moreover, among subjects who did not drink, the risks of HCC were significantly increased for smokers between HCC and controls. Besides, there was an increase in the number of HCC in smokers compared to nonsmokers after exclusion of HBV and/or HCV infection. Also, a significant difference was observed in the incidence of p53-RS between smokers and nonsmokers the HCC group. Furthermore, the p53-RS transcriptional activity was significantly increased in tumor tissues. <b><i>Conclusions:</i></b> It strongly demonstrated that tobacco smoking is positively and independently associated with HCC, which may be attributed to p53-RS and its gain of function.
DOI: 10.6084/m9.figshare.27304539.v1
title: 原始数据 中度至重度慢性小动脉病变是 IgA 肾病肾脏不良结局的独立危险因素

description: 慢性小动脉病变对 IgA 肾病预后的影响仍存在争议。本数据旨在探讨不同程度的慢性小动脉病变在预测 IgA 肾病患者预后方面的价值，并分析导致形成的相关危险因素。 该数据共包括 574 例。根据慢性小动脉病变的程度，将患者分为 4 组：无病变组、轻度病变组、中度病变组和重度病变组。记录相关的临床和病理特征以及肾脏结局。使用 SPSS 26.0 软件进行统计分析。连续变量表示为正态分布变量的平均值±标准差或非正态分布变量的中位数和四分位数间距。组间比较使用独立样本 t 检验或 Mann-Whitney U 检验进行两组比较和单因素方差分析 （ANOVA） 或 Kruskal-Wallis H 检验进行三组比较，Bonferroni 检验用于多重比较。分类变量以频率和百分比表示，并使用 χ2 检验、Fisher 精确检验或 Kruskal-Wallis 检验（如果适用）进行分析。使用 Kaplan-Meier 方法评估达到复合终点的累积发生率，并使用对数秩检验进行比较。单变量和多变量 Cox 回归分析用于评估与复合终点显著相关的因素。对显著的单变量因素进行多变量回归分析，将结果表示为调整后的风险比 （aHR） 和 95% 置信区间 （CI）。绘制受试者工作特征曲线 （ROC），计算曲线下面积 （AUC）。最佳截断值是根据最大约登指数确定的。采用 Logistic 回归分析确定中重度慢性小动脉病变的相关危险因素。使用多重插补技术解决缺失数据。连续变量通过线性回归模型进行估算，而分类变量使用 Logistic 回归模型进行估算。插补过程重复 5 次以确保稳健性。使用 α=0.05 的显着性水平，其中 P&lt;0.05 被认为具有统计学意义。使用 2023 年 6 月 8 日访问的匿名数据进行分析，确保研究仅使用去标识化数据。本研究已获得广东省中医院伦理委员会批准（批准号.YE2022-181-01），这符合临床研究的伦理原则以及赫尔辛基宣言和涉及人类健康的研究的国际伦理准则等文件。
DOI: 10.17632/spwgrcnjdg
title: QSAR datasets - Meta-QSAR

description: We extracted 2,219 protein targets from ChEMBL with a diverse number of drug-like chemical compounds, ranging from 30 to about 6,000, each target resulting in a dataset with as many examples as compounds. The datasets were originally used in (Olier et al. Meta-QSAR: a large-scale application of meta-learning to drug design and discovery. Machine Learning, 2018, 107 (1), 285-311). Chemical compounds were intrinsically described using a standard fingerprint representation (as it is the most commonly used in QSAR learning), where the presence or absence of a particular molecular substructure in a molecule (e.g. methyl group, benzene ring) is indicated by a Boolean variable. Specifically, we used the RDKit to calculate the 1024 bits FCFP4 fingerprint representation, which is one of the extended-connectivity fingerprints (Rogers and Hahn, 2010) for molecular characterisation. Each dataset consisted of 1,024 input binary variables, one for each fingerprint bit, and one floating-point output variable which represented the chemical compound activities against the target. We used IC50 values, inhibitory drug concentrations at 50%. IC50 value states the concentration of the drug compound that is required to block or inhibit 50% of the proteins. This response data has been normalised by taking the negative log of the drug concentrations that inhibited 50% of a target (pXC50).
DOI: 10.6084/m9.figshare.25744491.v1
title: Analysis of the population structure and genetic patterns of Kirghiz sheep using Ovine SNP50K Bead Chip

description: 42 Kirghiz sheep,189 Qira black sheep,and 160 Chinese Merino sheep were gene typed using the Illumina Ovine SNP50K chip.
DOI: 10.6084/m9.figshare.12594140.v1
title: PLSDB 2020_06_29

description: PLSDB files from 2020.06.29
DOI: 10.6084/m9.figshare.25977280.v1
title: Questionário de pesquisa: "Percepção pública da ciência: uma análise do Observatório Científico da UFC"

description: Questionário produzido para coletar dados de pesquisa intitulada "Percepção Pública da Ciência: uma análise do Observatório Científico da UFC", desenvolvida no âmbito do Programa Institucional de Bolsas de Iniciação Científica (PIBIC) da Universidade Federal do Ceará pelos bolsistas João Gabriel Bastos de Carvalho do Curso de Biotecnologia/UFC e Victória Isabelle Lopes de Mendonça do Curso de Biblioteconomia/UFC e pela professora Maria Giovanna Guedes Farias do Departamento de Ciências da Informação e do Programa de Pós-Graduação em Ciência da Informação/UFC. Objetivamos, por meio deste questionário, analisar se o Observatório Científico da UFC (ObservaUFC), por meio das postagens, influencia a percepção de temas científicos no cotidiano dos seus seguidores. Além disso, tencionamos verificar se o ObservaUFC produz uma divulgação científica de qualidade, capaz de impactar na percepção pública da ciência.
DOI: 10.60893/figshare.jap.27910713.v1
title: Supplement Number 2

description: Elemental composition (mass% and atomic%) of CS-based phosphor from EDAX
DOI: 10.17632/cwn4mm3png
title: Chlorophyll and its derivatives identified in Green Honey (GH)

description: The LC-MS/MS-based targeted analysis found 16 different chlorophylls and their derivatives in Green Honey (GH), namely chlorophyll a, chlorophyll b, chlorophyll c, chlorophyll d, pheophytin a, pheophytin b, hydroxypheophytin a, hydroxypheophytin b, hydroxychlorophyll a, chlorophyllide a, chlorophyllide b, phyropheophytin a, bacteriochlorophyll a, bacteriochlorophyll b, phytol and phytanic acids and none were found in Tualang Honey (TH).
DOI: 10.6084/m9.figshare.21191500.v1
title: Personality profiles and Pokemon GO engagement.csv

description: The study Personality profiles and engagement with the augmented reality game Pokémon GO is a cross-sectional study that sought to to contrast personality traits between active Pokemon GO players, occasional players, former players, and people who never played Pokemon GO.<br> In this collection we make available the <strong>main</strong> <strong>dataset</strong> used for the analysis in our research paper.
DOI: 10.6084/m9.figshare.100940.v1
title: developments in NGS

description: Summarises the developments in (next generation) sequencing. The data is based on the throughput metrics for the different platforms since their first instrument version came out.The figures visualise the results by plotting throughput in raw bases versus read length.
DOI: 10.6084/m9.figshare.17122220.v1
title: Data for: Calculation of the Tafel slope and reaction order of the oxygen evolution reaction between pH 12 and pH 14 for the adsorbate mechanism

description: Simulated data and code used to create figures (Figure 3-7 of the main text and Figure S2-S4 of the SI) of the publication titled:"Calculation of the Tafel slope and reaction order of the oxygen evolution reaction between pH 12 and pH 14 for the adsorbate mechanism"DOI: 10.1002/elsa.202100213by Denis Antipin<sup>[a]</sup>, Marcel Risch<sup>[a]</sup>[a] Nachwuchsgruppe Gestaltung des Sauerstoffentwicklungsmechanismus<br>Helmholtz-Zentrum Berlin für Materialien und Energie GmbH<br>Hahn-Meitner-Platz 1, 14109 Berlin<br><br><br>
DOI: 10.6084/m9.figshare.19499489.v1
title: patches and local annotations, slide 100, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.28802603.v2
title: shuju.xlsx

description: <b>A study on </b><b>driving behavior characteristics</b><b>driving behavior characteristics</b><b> and influencing factors of older drivers at </b><b>sianal-controlled and unsianal-controlled intersections</b>
DOI: 10.17632/zmwh6wxyv3
title: Forward-modelling the Luminosity, Distance, and Size distributions of the Milky Way Satellites

description: data used for analyses and figures in Manwadkar & Kravtsov paper: https://arxiv.org/abs/2112.04511
DOI: 10.26188/21399891.v1
title: Stroke rehabilitation and the physical environment of rehabilitation facilities: behaviour observations and patient reported outcomes

description: This data set is from data collected from stroke survivors admitted to a rehabilitation ward after stroke. Twenty patients participated from one rehabiliation facility (45% female, mean age = 73 years) and 16 from another rehabilitation facility (37.5% female, mean age = 67.2 years). <br> Datafile 1 (pt_reported) includes the following patient reported outcome measures. The Pittsburgh Sleep Quality Index (PSQI) questionnaire (Buysse et al., 1989) – adapted to refer to the past week rather than the past month to correspond more closely with the participant’s inpatient stay – and a suite of emotional well-being questionnaires: the Depression, Anxiety, and Stress Scales (DASS-21; Lovibond & Lovibond, 1995); the Multidimensional State Boredom Scale (MSBS; Fahlman et al., 2013); and a visual analogue scale (VAS) designed to assess the extent to which participants thought the hospital environment motivated them to participate in rehabilitation practice and activity from zero (strongly demotivating) to 100 (strongly motivating). Participants could choose to complete the booklet independently or with help, at any point in their participation, and over as many sessions as needed. <br> Datafile 2 (activity) includes behaviour observation of the same participants who completed the patient reported outcome measures. To explore stroke survivor behaviour in the environment, data were collected about each participants’ activity (physical, cognitive, and social) and sleep. Behavioural mapping was used to observe their activity (Janssen, et al., 2014). Observations were made every 10 minutes over a nine-hour period on any weekday, generating 54 discrete observation epochs per participant including three randomly allocated observer breaks. At each epoch, the observer recorded the participant’s physical, cognitive, and social activity, location, and who they were with. Physical activity included any purposeful physical movement. Cognitive activity was defined as being engaged in a cognitive task (e.g., reading, puzzles, listening to music), and social activity included any verbal or non-verbal interaction. If the participant could not be observed (e.g., observer break, participant in the bathroom), staff or the participant were asked to retrospectively estimate activity. <br> Full description of study methods can be found in PhD thesis referenced below, accessible via this link: http://hdl.handle.net/11343/242046 <br> R. Lipson-Smith, Space for recovery after stroke: Exploring the role of the physical environment in inpatient rehabilitation facilities, The University of Melbourne PhD thesis 2020
DOI: 10.6084/m9.figshare.12444614.v1
title: Data from 'The role of root community attributes in predicting soil fungal and bacterial community patterns'

description: This dataset corresponds to the raw data used in López‐Angulo J, de la Cruz M, Chacón‐Labella J, Illuminati A, Matesanz S, Pescador DS, Pías B, Sánchez AM, Escudero A. 2020. The role of root community attributes in predicting soil fungal and bacterial community patterns. New Phytologist.<br>The data presented here involves: (1) abundances of the fungal and (2) bacterial OTUs across 83 soil samples estimated from DNA metabarcoding; (3) abundance of plant species found belowground estimated from DNA metabarcoding; (4) abundance of plant species found aboveground visually estimated, (5) soil physicochemical properties; (6) spatial coordinates used to generate a set of Moran´s eigenvectors; (7) taxonomic classification of the bacterial and (8) fungal OTUs; and (9) metadata including the description of all the variables and units.
DOI: 10.6084/m9.figshare.6174056.v5
title: fwt_standings.csv

description: Dataset of all FWT winners from the 23 tours between 1996 and 2018 and added the age of the riders from either the FWT website or a brief web-search (some missing).<br>
DOI: 10.6084/m9.figshare.23632401.v1
title: anemia_1

description: Preposttest study
DOI: 10.6084/m9.figshare.25478695.v1
title: <b>Mangiferin regulates lipogenesis mediated by Advanced Glycation End products through AKR1B1</b>

description: Analysis of transcriptome profiles of DPN patients available in SRA-NCBI database and genes annotated for DPN onset further confirmed the novel property of AKR1B1 in regulation of lipogenesis in DPN patients.
DOI: 10.6084/m9.figshare.13663212.v1
title: Additional file 3 of Auto-HMM-LMF: feature selection based method for prediction of drug response via autoencoder and hidden Markov model

description: Additional file 3. The similarity matrices based on tissue type information corresponding to CCLE dataset.
DOI: 10.6084/m9.figshare.7363298.v2
title: Experiment 1 DICOM

description: 11 participants with initials. 4 runs per experiment. Sub-folder was named as number of *_ipsi_run. Each sub-folder contains 5760 DICOM files made by 180 TR * 32 Slice.
DOI: 10.6084/m9.figshare.853800.v1
title: PSI_MERRA_GIDMaPS

description: Drought Index: MSDI, Source: MERRA
DOI: 10.6084/m9.figshare.3520079.v1
title: Appendix B. Parameterization and evaluation of the iLand wildfire module.

description: Parameterization and evaluation of the iLand wildfire module.
DOI: 10.6084/m9.figshare.21624501.v1
title: Development And Validation of The Traumatized Self-Identity Scale (TSIS): Adopting A Narrative Psychology Approach to Trauma‏

description: This is dataset of participants responding to TSIS and also other scales needed for convergebt validity. The study is about developing a traumatized self-identity scale . For more information about the lable of each questionnaire and subscales please refer to the manuscript.
DOI: 10.6084/m9.figshare.22152056.v2
title: Waller et al_2023_Collateral TB_Source Data.xlsx

description: Source data for figures generated in: https://doi.org/10.1101/2022.10.31.514625
DOI: 10.17632/g6c9kjbcsr
title: Urban biodiversity assessment: A review with special emphasis on Indian scenario

description: World’s cities are expanding rapidly in accordance with the requirements of increasing population. Urban expansion and associated land-cover and climate changes impart greater challenges on the urban ecosystems and severely threaten biodiversity. Urban biodiversity, the diversity in urban setting plays vital roles in maintaining the quality of urban life by offering a variety of environmental and social functions. The research in this field is scarce at present in India especially in Kerala, despite the alarming rates of urban growth and related changes in biodiversity. The well-being and sustainability of urban life and its diversity desires proper planning and management approaches. For such planning, a baseline information on the present status of urban biodiversity especially species documentation is essential. A long-term monitoring and estimation of composition, structure and dynamics of urban biodiversity variables and associated habitat and climatic features over time is critical for future management practices. The integration of findings in the field of urban biodiversity will contribute for a sustainable conservation planning to mitigate impacts of urbanization on biodiversity and to promote urban life.

(In Proceedings of the National Environment and Climate Change Congress - 2018 (pp. 29-39). Thiruvananthapuram: Directorate of Environment and Climate Change, Department of Environment, Government of Kerala.)