cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26008/1912/bco-dmo.892323.1
title: Canopy closure values from photographs taken within octocoral forestsalong the south shore of St. John, U.S. Virgin Islands in March of 2019

description: These data represent the determination of canopy closure values from photographs taken within octocoral forests along the south shore of St. John, U.S. Virgin Islands. Sampling was performed during March 2019 in quadrats (1m2) placed at ~8–9-m depth. These data were recorded in conjunction with light intensity measurements and used to investigate the relationship between octocoral canopy metrics and evidence of sunflecking in the understory environment.

These data were collected as part of an NSF Coral Reef Time Series, Virgin Islands: Long-term coral reef community dynamics in the Virgin Islands National Park and were published in Girard and Edmunds (2023).
DOI: 10.26008/1912/bco-dmo.892258.1
title: Canopy closure values from photographs taken within octocoral forests in Lameshur Bay St. John, U.S. Virgin Islands from July 2019 to Jan 2020

description: These data represent the determination of canopy closure values from photographs taken within octocoral forests in Lameshur Bay St. John, U.S. Virgin Islands. Sampling was performed July – August 2019, and January 2020 in quadrats (1m2) placed at ≤ 13-m depth. These data were recorded in conjunction with invertebrate species abundances and used to test for an association between octocoral canopy metrics and benthic invertebrate communities.

These data were collected as part of an NSF Coral Reef Time Series, Virgin Islands: Long-term coral reef community dynamics in the Virgin Islands National Park and were published in Girard and Edmunds (2023).
DOI: 10.26008/1912/bco-dmo.894930.1
title: Average yearly extension rate, calcification rate, and density for each core sample from Porites cf. lobata coral at Palau's Rock Islands

description: Ocean warming is killing corals, but heat-tolerant populations exist; if protected, they could replenish affected reefs naturally or through restoration. Palau's Rock Islands experience consistently higher temperatures and extreme heatwaves, yet their diverse coral communities bleach less than those on Palau's cooler outer reefs. Here, we combined genetic analyses, bleaching histories, and growth rates of Porites cf. lobata colonies to identify thermally tolerant genotypes, map their distribution, and investigate potential growth trade-offs. We identified four genetic lineages of P. cf. lobata. On Palau's outer reefs, a thermally sensitive lineage dominates. The Rock Islands harbor two lineages with enhanced thermal tolerance; one of which shows no consistent growth trade-off and also occurs on several outer reefs. This suggests that the Rock Islands provide naturally tolerant larvae to neighboring areas. Finding and protecting such sources of thermally-tolerant corals is key to reef survival under 21st century climate change. This dataset contains the average yearly extension rate, calcification rate, and density for each core sample.
DOI: 10.26008/1912/bco-dmo.872332.1
title: Temperature data from Nearshore Isla Natividad, Baja California Mexico from July to August of 2018

description: Temperature data collected as part of a Nearshore study conducted Isla Natividad, Baja California Mexico from July to August of 2018 that included currents, water level, wave data, temperature, and dissolved oxygen.
DOI: 10.26008/1912/bco-dmo.872351.1
title: Dissolved oxygen and temperature from Nearshore Isla Natividad, Baja California Mexico from July to August of 2018

description: Dissolved oxygen and temperature data collected as part of a Nearshore study conducted Isla Natividad, Baja California Mexico from July to August of 2018 that included currents, water level, wave data, temperature, and dissolved oxygen.
DOI: 10.26008/1912/bco-dmo.894894.1
title: Sampling information and presence/absence of stress bands (in 1998 and 2010) in Porites cf. lobata coral at Palau's Rock Islands

description: Ocean warming is killing corals, but heat-tolerant populations exist; if protected, they could replenish affected reefs naturally or through restoration. Palau's Rock Islands experience consistently higher temperatures and extreme heatwaves, yet their diverse coral communities bleach less than those on Palau's cooler outer reefs. Here, we combined genetic analyses, bleaching histories, and growth rates of Porites cf. lobata colonies to identify thermally tolerant genotypes, map their distribution, and investigate potential growth trade-offs. We identified four genetic lineages of P. cf. lobata. On Palau's outer reefs, a thermally sensitive lineage dominates. The Rock Islands harbor two lineages with enhanced thermal tolerance; one of which shows no consistent growth trade-off and also occurs on several outer reefs. This suggests that the Rock Islands provide naturally tolerant larvae to neighboring areas. Finding and protecting such sources of thermally-tolerant corals is key to reef survival under 21st century climate change. This dataset contains sampling location information for each sample, depth, and diameter of colonies, and presence/absence of stress bands in 1998 and 2010.
DOI: 10.26008/1912/bco-dmo.872339.1
title: ADCP data from Nearshore Isla Natividad, Baja California Mexico from July to August of 2018

description: ADCP data collected as part of a Nearshore study conducted Isla Natividad, Baja California Mexico from July to August of 2018 that included currents, water level, wave data, temperature, and dissolved oxygen.
DOI: 10.26008/1912/bco-dmo.872345.1
title: CTD data from Nearshore Isla Natividad, Baja California Mexico from July to August of 2018

description: CTD data collected as part of a Nearshore study conducted Isla Natividad, Baja California Mexico from July to August of 2018 that included currents, water level, wave data, temperature, and dissolved oxygen.
DOI: 10.26008/1912/bco-dmo.872357.1
title: Pressure data from Nearshore Isla Natividad, Baja California Mexico from July to August of 2018

description: Pressure data collected as part of a Nearshore study conducted Isla Natividad, Baja California Mexico from July to August of 2018 that included currents, water level, wave data, temperature, and dissolved oxygen.
DOI: 10.26008/1912/bco-dmo.879118.2
title: Dissection data for metazoan parasites and other symbionts from vent-endemic host species collected from the 9°50’N deep-sea hydrothermal vent field.

description: A dataset of metazoan parasite species and counts from dissections of hydrothermal vent fauna from the 9°50’N vent field on the East Pacific Rise (EPR). Specimens were primarily collected on two research cruises, AT42-21 in 2019 and RR2102 in 2021. This dataset also includes dissection data from several preserved fish specimens collected on cruises AT15-15 in 2007 (provided by Kate Buckman and Timothy Shank) and AT37-12 in 2017 (provided by Carolyn Tepolt). Vent fauna were collected using traps, slurps, and the manipulator of HOV Alvin and ROV Jason. We provide dissection data from 2,215 potential host individuals of 51 species from the 9°50’N EPR vent field. These included 10 crustacean, 2 fish, 14 mollusk, and 25 polychaete species. Dissections revealed 12 adult metazoan parasite morphogroups and nine larval morphogroups in five major marine parasite taxa. These were two adult acanthocephalans, one adult copepod, one adult nematode, one larval nematode, one adult rhizocephalan, seven adult trematodes, six trematode metacercariae, and one trematode sporocyst. Dissections also revealed non-parasitic symbionts: several copepod species that may be commensals or micropredators, nemertean egg predators, and the commensal scaleworm Branchipolynoe symmitilida. Photographs of parasites and hosts are provided as zip files.
DOI: 10.26008/1912/bco-dmo.879266.1
title: Records and metadata for deep-sea hydrothermal vent parasite, egg predator, and micropredator species reported in published literature.

description: A compilation of records and metadata for deep-sea hydrothermal vent parasite, egg predator, and micropredator species reported in published literature as of July 2022.
DOI: 10.26008/1912/bco-dmo.879253.2
title: Parasite taxonomic and life cycle information from literature

description: Aggregated summary table of metazoan parasite species from atoll lagoon sandflats (Vidal-Martínez et al. 2012, Vidal-Martínez et al. 2017, McLaughlin 2018, González-Solís et al. 2019, Soler-Jiménez et al. 2019), kelp forests (Morton et al. 2021), and deep-sea hydrothermal vents included in analyses in Dykman et al. (2023). The summary table also includes taxonomic and life cycle information for each parasite species compiled from literature, and rationale for inclusion or exclusion from analyses in Dykman et al. (2023).
DOI: 10.26008/1912/bco-dmo.895783.1
title: Wild spat data from experiments performed to investigate the effect of salinity juvenile oyster growth using spat collected from three salinity zones in Delaware Bay in 2019 and 2020

description: Higher salinity habitats tend to support faster oyster growth, while lower salinity habitats act as a refuge from predation and disease but tend to slow growth. Two experiments were performed to investigate the effect of salinity juvenile oyster (also known as spat) growth. 

One experiment used wild oyster spat collected from three distinct Delaware Bay salinity zones that were then transplanted into various salinity conditions in the laboratory where growth was monitored (results reported in this dataset). Transplanting into low salinity led to decreased growth compared to transplanting to higher salinity, and growth of oyster spat was overall highest for spat from the lowest salinity source. 

A second experiment used hatchery reared oyster larvae set in one of four different salinity conditions  (see &quot;Related Datasets&quot; section for methods and results of hatchery spat experiments).

Lower final salinity treatments were associated with lower growth, lower initial salinity treatments were associated with faster final treatment growth, and final growth depended on the interaction between initial and final salinity.  

As increased freshwater events due to climate change are expected in the Delaware Bay and regionally in the Northeast, these results indicate that nonlinear early life stress responses are important to quantify to better understand oyster stock resilience and plan management.
DOI: 10.26008/1912/bco-dmo.895791.1
title: Hatchery-reared spat data from laboratory experiments performed to investigate the effect of salinity on juvenile oyster growth in 2019 and 2020

description: Higher salinity habitats tend to support faster oyster growth, while lower salinity habitats act as a refuge from predation and disease but tend to slow growth. Two experiments were performed to investigate the effect of salinity juvenile oyster (also known as spat) growth. 

One experiment used wild oyster spat collected from three distinct Delaware Bay salinity zones that were then transplanted into various salinity conditions in the laboratory where growth was monitored (see &quot;Related Datasets&quot; section for methods and results of wild spat experiments).  

A second experiment used hatchery reared oyster larvae set in one of four different salinity conditions (results reported in this dataset). Those spat were maintained in settlement salinities 22, 16, 10 and 6 for two to three weeks post-settlement, then measured before fully factorial transfer into new salinity conditions with measurement three weeks later. 

Lower final salinity treatments were associated with lower growth, lower initial salinity treatments were associated with faster final treatment growth, and final growth depended on the interaction between initial and final salinity.  

As increased freshwater events due to climate change are expected in the Delaware Bay and regionally in the Northeast, these results indicate that nonlinear early life stress responses are important to quantify to better understand oyster stock resilience and plan management.
DOI: 10.26008/1912/bco-dmo.881563.1
title: Particle size, volume, and converted biomass from FlowCam runs on the &quot;SalpPOOP&quot; cruise on R/V Tangaroa during October and November 2018

description: This dataset includes particle size, volume, and converted biomass from FlowCam runs on the &quot;SalpPOOP&quot; cruise on R/V Tangaroa during October and November 2018.
DOI: 10.26008/1912/bco-dmo.881656.1
title: Size-binned particle abundance and biovolume from FlowCam runs on the &quot;SalpPOOP&quot; cruise on R/V Tangaroa during October and November 2018

description: This dataset includes size-binned particle abundance and biovolume from FlowCam runs on the &quot;SalpPOOP&quot; cruise on R/V Tangaroa during October and November 2018.
DOI: 10.17026/ar/8ic6hg
title: A-23.0170: Tilburg, Galjoenstraat Tilburg, Galjoenstraat

description: &lt;p&gt;In opdracht van Van der Weegen BV heeft BAAC een proefsleuvenonderzoek uitgevoerd in het plangebied Galjoenstraat te Tilburg. De aanleiding voor het onderzoek is de voorgenomen bouw van woningen in het plangebied waarbij een gerede kans bestaat dat archeologische waarden vernietigd zullen worden. Het proefsleuvenonderzoek vond plaats op 5 november 2024. Contactpersoon namens de opdrachtgever is M. Haans. De gemeente Tilburg is de bevoegde overheid voor dit project. G. van den Eynde is de contactpersoon namens de bevoegde overheid. Het veldteam bestond uit O. Van Remoorter (Projectleider, senior KNA-archeoloog), B. van de Weerd (senior KNA-archeoloog), F. van der Leden (veldarcheoloog) en T. van den Putte (veldarcheoloog en fysisch geograaf). De graafmachine werd geleverd door Van Grinneken BV. Tijdens het veldonderzoek zijn geen specialisten ingezet. Tijdens het veldwerk zijn buiten moesbedden en recente verstoringen geen sporen aangetroffen. De verstoringen zijn wellicht te linken aan de bouwwerkzaamheden en sloopwerken die tussen de jaren 60 van de vorige eeuw en 2023 hebben plaatsgevonden binnen het plangebied. Aangezien er geen behoudenswaardige vindplaats aanwezig is binnen het plangebied, wordt een vrijgave van het gebied geadviseerd.&lt;/p&gt;
DOI: 10.26008/1912/bco-dmo.880927.1
title: Particle size, volume, and converted biomass from the gut contents of salps imaged via scanning electron microscopy on the &quot;SalpPOOP&quot; cruise on R/V Tangaroa during October and November 2018

description: This dataset includes particle size, volume, and converted biomass from the gut contents of salps imaged via scanning electron microscopy on the &quot;SalpPOOP&quot; cruise on R/V Tangaroa during October and November 2018.
DOI: 10.26008/1912/bco-dmo.881172.1
title: Size-binned particle abundance and biovolume of the gut contents of salps imaged via scanning electron microscopy on the &quot;SalpPOOP&quot; cruise on R/V Tangaroa during October and November 2018

description: This dataset includes size-binned particle abundance and biovolume of the gut contents of salps imaged via scanning electron microscopy on the &quot;SalpPOOP&quot; cruise on R/V Tangaroa during October and November 2018.
DOI: 10.26008/1912/bco-dmo.862731.1
title: 19 Metagenomes and 7 metatranscriptomes from sediment samples collected offshore of San Francisco, Califronia, USA

description: This dataset includes metadata and NCBI accession numbers describing 19 metagenomes and 7 metatranscriptomes from sediment samples collected offshore of San Francisco, Califronia, USA in March 2017 on R/V Oceanus cruise OC1703A. The generation of these data was completed on May 7, 2021.
DOI: 10.26008/1912/bco-dmo.894312.1
title: Water level data from a slug test within a shallow, sandy subterranean estuary (STE), Gloucester Point, Virginia USA in May 2021

description: These data were collected during a slug test in 2021 from a sandy subterranean estuary (STE) located in Gloucester Point, Virginia, USA, which is located along the York River Estuary, a tributary of the Chesapeake Bay. These data were collected in order to estimate the hydraulic conductivity of the site.
DOI: 10.26008/1912/bco-dmo.894323.1
title: Sediment grain size data collected from a shallow subterranean estuary (STE) in Gloucester Point, Virginia USA, from 2018 to 2019

description: These data were collected from a sandy subterranean estuary (STE) located in Gloucester Point, Virginia, USA, which is located along the York River Estuary, a tributary of the Chesapeake Bay. Sediments were measured for grain size analyses between 2018 and 2019.
DOI: 10.26008/1912/bco-dmo.885637.1
title: Synthesis of doliolid imagery and oceanographic data from six ecosystems collected from multiple research cruises conducted between 2010 and 2019

description: Doliolids are common gelatinous grazers in marine ecosystems around the world. Aggregations or blooms of these organisms occur frequently, but they are difficult to measure or predict and ecological studies typically target a single region or site that does not encompass the range of possible habitats favoring doliolid proliferation. To address these limitations, we combined in situ imaging data from six coastal ecosystems, including the Oregon shelf, northern California, southern California Bight, northern Gulf of Mexico, Straits of Florida, and Mediterranean Sea, to resolve and compare doliolid habitat associations during warm months when environmental gradients are strong and doliolid blooms are frequently documented. The data analyzed were from multiple research cruises conducted between 2010 and 2019.
DOI: 10.26008/1912/bco-dmo.894099.1
title: Determination of carbon, nitrogen, and phosphorous content in sinking particles at the Bermuda Atlantic Time-series Study (BATS) site from 1988-2022 using a Particle Interceptor Trap System (PITS)

description: Data presented here contain elemental sinking fluxes of carbon, nitrogen, and phosphorus (C, N, P) from the Bermuda Atlantic Time-series Study site for October 1988 (BATS Cruise 1) through December 2022 (BATS Cruise 399). To trap oceanic sediment flux, a Particle Interceptor Trap System (PITS) was used. Composed of polycarbonate tubes (7 cm diameter by 53 cm height) containing a buffered brine solution and polycarbonate filters at the bottom where the flux is collected (Knauer et al., 1979), this floating sediment trap array is deployed during monthly BATS cruises at three depths (150, 200, and 300 meters) for a target time of 72 hours. After recovery, the filters are examined under a microscope to remove swimming zooplankton to prevent skewed end results. Three samples from each depth are acidified to remove inorganic carbon before measuring organic carbon and nitrogen using an elemental analyzer, while the remaining non-acidified sample is analyzed for total carbon content. Additional tubes are also deployed (three per depth) for phosphorus counts and analyzed at Bigelow Laboratory of Ocean Sciences. Three other tubes for blank counts are also prepared, but not deployed.
DOI: 10.26008/1912/bco-dmo.895121.1
title: Abundances of larval Northern Anchovy (Engraulis mordax), Rockfish (Sebastes spp., and other/unidentified larvae from Bongo plankton net tows conducted in the subtropical Southern California Bight from January to April 2021

description: This dataset includes abundances of larval Northern Anchovy (Engraulis mordax), Rockfish (Sebastes spp., and other/unidentified larvae from Bongo plankton net tows conducted in the subtropical Southern California Bight from January to April 2021. Net tows were carried out on several cruises aboard R/V Bob and Betty Beyster and R/V Shearwater.
DOI: 10.26008/1912/bco-dmo.540158.1
title: pCO2 as one of multiple stressors for Thalassiosira weissflogii - cell numbers - ambient treatments from UCSB MSI Passow Lab from 2009 to 2010 (OA - Ocean Acidification and Aggregation project)

description: pCO2 as one of multiple stressors for Thalassiosira weissflogii - cell numbers - ambient treatments from UCSB MSI Passow Lab from 2009 to 2010
DOI: 10.26008/1912/bco-dmo.540178.1
title: pCO2 as one of multiple stressors for Thalassiosira weissflogii - Carbonate system - ambient treatments - from UCSB MSI Passow Lab from 2009 to 2010 (OA - Ocean Acidification and Aggregation project)

description: pCO2 as one of multiple stressors for Thalassiosira weissflogii - Carbonate system - ambient treatments - from UCSB MSI Passow Lab from 2009 to 2010
DOI: 10.26008/1912/bco-dmo.889930.1
title: Pigment concentrations derived from High-Performance Liquid Chromatography (HPLC) analysis from samples collected during the Tara Pacific expedition from 2016-2018

description: The Tara Pacific expedition (2016-2018) sampled coral ecosystems around 32 islands in the Pacific Ocean. Here we provide pigment concentration data originating from 545 stations that were sampled during the expedition in the Pacific and during transit across the Atlantic. Pigment concentrations were derived from High-Performance Liquid Chromatography (HPLC) analysis. This data set provides high-quality measurements of major pigments including chlorophylls a, b, and c, peridinin, 19'-butanoyloxyfucoxanthin, fucoxanthin, neoxanthin, prasinoxanthin, violaxanthin, 19'-hexanoyloxyfucoxanthin, diadinoxanthin, antheraxanthin, alloxanthin, diatoxanthin, zeaxanthin, lutein, divinyl chlorophyll b, chlorophyll b, divinyl chlorophyll a, chlorophyll a, carotene, and bacteriochlorophyll a, which can be used to estimate phytoplankton community composition. More details on the Tara Pacific expedition and its sampling program can be found in Lombard et al., 2022 (doi: 10.1101/2022.05.25.493210).
DOI: 10.26008/1912/bco-dmo.539886.1
title: pCO2 as one of multiple stressors for Thalassiosira weissflogii - Cell Characteristics: C:N ratio from UCSB MSI Passow Lab from 2009 to 2010 (OA - Ocean Acidification and Aggregation project)

description: pCO2 as one of multiple stressors for Thalassiosira weissflogii - Cell Characteristics: C:N ratio from UCSB MSI Passow Lab from 2009 to 2010
DOI: 10.26008/1912/bco-dmo.540138.1
title: pCO2 as one of multiple stressors for Thalassiosira weissflogii - growth rates - from UCSB MSI Passow Lab from 2009 to 2010 (OA - Ocean Acidification and Aggregation project)

description: pCO2 as one of multiple stressors for Thalassiosira weissflogii - growth rates - from UCSB MSI Passow Lab from 2009 to 2010
DOI: 10.26008/1912/bco-dmo.540148.1
title: pCO2 as one of multiple stressors for Thalassiosira weissflogii - pH extremes - from UCSB MSI Passow Lab from 2009 to 2010 (OA - Ocean Acidification and Aggregation project)

description: pCO2 as one of multiple stressors for Thalassiosira weissflogii - pH extremes - from UCSB MSI Passow Lab from 2009 to 2010
DOI: 10.26008/1912/bco-dmo.893165.1
title: Microsatellite genotypes of marine bryozoan from shallow seagrass habitats in St. Teresa, Florida, USA in June 2017

description: We integrate a series of experiments to study how dispersal affects the density and relatedness of neighbors, and how the density and relatedness of neighbors in turn affects fitness. In a marine bryozoan, microsatellite genetic markers identified very few half sibs (and no full sibs) in adults from the natural population, and rarely close enough to directly interact.