cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3982241
title: Images to accompany "A Renaissance Synthesis of Ancient Christian Themes: Architecture, Altarpieces and Imagined Spaces in San Giovanni Crisostomo, Venice, 1495-1520" by Éamonn Ó Carragáin

description: A set of photographs chosen to illustrate the article <em>A Renaissance Synthesis of Ancient Christian Themes: Architecture, Altarpieces and Imagined Spaces in San Giovanni Crisostomo, Venice, 1495-1520 (https://doi.org/10.1484/m.sem-eb.5.119636)</em> by Éamonn Ó Carragáin. The photographs were taken by Éamonn Ó Carragáin between May 2015 and May 2017 in the church of San Giovanni Crisostomo, Venice, Italy. <strong>File List</strong> <em>Note: The numbering of files matches the numbering of figures in the published article. There is no Figure 1.</em> 1. Filename: figure_02.jpg <br> <em>Figure 2. The Modonna Greca, legacy of Giacomo de’ Bernabò, d. 1438; below, altarpiece by Tullio Lombardo, inserted 1506. </em> 2. Filename: figure_03.jpg<br> <em>Figure 3. The Bernabò Chapel and altarpiece; Pulpit donated by Ludovico Talenti; Monument to Talenti.</em> 3. Filename: figure_04.jpg <br> <em>Figure 4. View of the Bernabò Chapel.</em> 4. Filename: figure_05.jpg<br> <em>Figure 5. High altar, and Sebastiano Luciani's altarpiece. Note its framing pillars, and the steps leading to the altar area: these are echoed by the pillar, and the steps, in the painting. </em> 5. Filename: figure_06.jpg<br> <em>Figure 6. Nave of San Giovanni Crisostomo, showing steps and tiled floor, both echoed in the altarpiece.</em> 6. Filename: figure_07.jpg<br> <em>Figure 7. Diletti Chapel (viewed from the Bernabò Chapel), showing the light from the side windows.</em> 7. Filename: figure_08.jpg <br> <em>Figure 8. Diletti Chapel, showing St Christopher and St Louis of Toulouse standing inside the painted chancel, and looking across the nave towards the Bernabò Chapel. </em> 8. Filename: figures_with_captions.pptx <br> <em>A Microsoft Powerpoint document showing each of the figures in order with their captions.</em>
DOI: 10.5281/zenodo.2561359
title: Images to accompany "A Renaissance Synthesis of Ancient Christian Themes: Architecture, Altarpieces and Imagined Spaces in San Giovanni Crisostomo, Venice, 1495-1520" by Éamonn Ó Carragáin

description: A set of photographs chosen to illustrate the article <em>A Renaissance Synthesis of Ancient Christian Themes: Architecture, Altarpieces and Imagined Spaces in San Giovanni Crisostomo, Venice, 1495-1520 (https://doi.org/10.1484/m.sem-eb.5.119636)</em> by Éamonn Ó Carragáin. The photographs were taken by Éamonn Ó Carragáin between May 2015 and May 2017 in the church of San Giovanni Crisostomo, Venice, Italy. <strong>File List</strong> <em>Note: The numbering of files matches the numbering of figures in the published article. There is no Figure 1.</em> 1. Filename: figure_02.jpg <br> <em>Figure 2. The Modonna Greca, legacy of Giacomo de’ Bernabò, d. 1438; below, altarpiece by Tullio Lombardo, inserted 1506. </em> 2. Filename: figure_03.jpg<br> <em>Figure 3. The Bernabò Chapel and altarpiece; Pulpit donated by Ludovico Talenti; Monument to Talenti.</em> 3. Filename: figure_04.jpg <br> <em>Figure 4. View of the Bernabò Chapel.</em> 4. Filename: figure_05.jpg<br> <em>Figure 5. High altar, and Sebastiano Luciani's altarpiece. Note its framing pillars, and the steps leading to the altar area: these are echoed by the pillar, and the steps, in the painting. </em> 5. Filename: figure_06.jpg<br> <em>Figure 6. Nave of San Giovanni Crisostomo, showing steps and tiled floor, both echoed in the altarpiece.</em> 6. Filename: figure_07.jpg<br> <em>Figure 7. Diletti Chapel (viewed from the Bernabò Chapel), showing the light from the side windows.</em> 7. Filename: figure_08.jpg <br> <em>Figure 8. Diletti Chapel, showing St Christopher and St Louis of Toulouse standing inside the painted chancel, and looking across the nave towards the Bernabò Chapel. </em> 8. Filename: figures_with_captions.pptx <br> <em>A Microsoft Powerpoint document showing each of the figures in order with their captions.</em>
DOI: 10.5281/zenodo.7213747
title: Development and evaluation of E3SM-MOSAIC: Spatial distributions and radiative effects of nitrate aerosol

description: FC20TR-MOZ_NUG_PD_V2beta4_ANN_200501_201412_climo.nc 10-yr mean for MZT_PD FC20TR-MOZ_MOSAIC_AIKDST_NUG_PD_V2beta4_ANN_200501_201412_climo.nc 10-yr mean for MTC_SLOW_PD FC20TR-MOZ_MOSAIC_AIKDST_MTC_NUG_PD_V2beta4_ANN_200501_201412_climo.nc 10-yr mean for MTC_WGT_PD FC20TR-MOZ_MOSAIC_AIKDST_MTC-SPLC_NUG_PD_V2beta4_ANN_200501_201412_climo.nc 10-yr mean for MTC_SPLC_PD NO3_TM_2005-2014.nc 10-yr mean nitrate burden NO3_AQCH_GAEX_2005-2014.nc 10-yr mean for nitrate chemistry production NO3_DRF_2005-2014.nc 10-yr mean nitrate direct forcing between PD and PI NO3_INDRF_2005-2014.nc 10-yr mean nitrate indirect forcing between PD and PI NH4_TM_2005-2014.nc 10-yr mean for ammonium burden NH4_DRF_2005-2014.nc 10-yr mean ammonium direct forcing between PD and PI SO4_TM_2005-2014.nc 10-yr mean for sulfate burden SO4_DRF_2005-2014.nc 10-yr mean sulfate direct forcing between PD and PI CCN3_1850.nc Cloud condensation nuclei number concentrations at 0.1% super saturation at PI CCN3_2005-2014.nc CCN3 at PD CCN3_NONO3_1850.nc CCN3 at PI without nitrate formation CCN3_NONO3_2005-2014.nc CCN3 at PD without nitrate formation CDNC_*.nc cloud droplet number concentrations CLDFRC_*.nc cloud fraction CWP_*.nc cloud liquid water path
DOI: 10.5281/zenodo.7213746
title: Development and evaluation of E3SM-MOSAIC: Spatial distributions and radiative effects of nitrate aerosol

description: FC20TR-MOZ_NUG_PD_V2beta4_ANN_200501_201412_climo.nc 10-yr mean for MZT_PD FC20TR-MOZ_MOSAIC_AIKDST_NUG_PD_V2beta4_ANN_200501_201412_climo.nc 10-yr mean for MTC_SLOW_PD FC20TR-MOZ_MOSAIC_AIKDST_MTC_NUG_PD_V2beta4_ANN_200501_201412_climo.nc 10-yr mean for MTC_WGT_PD FC20TR-MOZ_MOSAIC_AIKDST_MTC-SPLC_NUG_PD_V2beta4_ANN_200501_201412_climo.nc 10-yr mean for MTC_SPLC_PD NO3_TM_2005-2014.nc 10-yr mean nitrate burden NO3_AQCH_GAEX_2005-2014.nc 10-yr mean for nitrate chemistry production NO3_DRF_2005-2014.nc 10-yr mean nitrate direct forcing between PD and PI NO3_INDRF_2005-2014.nc 10-yr mean nitrate indirect forcing between PD and PI NH4_TM_2005-2014.nc 10-yr mean for ammonium burden NH4_DRF_2005-2014.nc 10-yr mean ammonium direct forcing between PD and PI SO4_TM_2005-2014.nc 10-yr mean for sulfate burden SO4_DRF_2005-2014.nc 10-yr mean sulfate direct forcing between PD and PI CCN3_1850.nc Cloud condensation nuclei number concentrations at 0.1% super saturation at PI CCN3_2005-2014.nc CCN3 at PD CCN3_NONO3_1850.nc CCN3 at PI without nitrate formation CCN3_NONO3_2005-2014.nc CCN3 at PD without nitrate formation CDNC_*.nc cloud droplet number concentrations CLDFRC_*.nc cloud fraction CWP_*.nc cloud liquid water path
DOI: 10.6084/m9.figshare.21347568.v1
title: Supplementary Data for: Dual domestication, diversity, and differential introgression in Old World cotton diploids

description: Domestication in the cotton genus is remarkable in that it has occurred independently four different times at two different ploidy levels. Relatively little is known about genome evolution and domestication in the cultivated diploid species<em> Gossypium herbaceum</em> and <em>G. arboreum</em>, due to the absence of wild representatives for the latter species, their ancient domestication, and their joint history of human-mediated dispersal and interspecific gene flow. Using in-depth resequencing of a broad sampling from both species, we provide support for their independent domestication, as opposed to a progenitor-derivative relationship, showing that diversity (mean π = 6×10-3) within species is similar, and that divergence between species is modest (FST=0.413). Individual accessions were homozygous for ancestral SNPs at over half of variable sites, while fixed, derived sites were at modest frequencies. Notably, two chromosomes with a paucity of fixed, derived sites (<em>i.e</em>., chromosomes 7 and 10) were also strongly implicated as having experienced high levels of introgression. Collectively, these data demonstrate variable permeability to introgression among chromosomes, which we propose is due to divergent selection under domestication and/or the phenomenon of F2 breakdown in interspecific crosses. Our analyses provide insight into the evolutionary forces that shape diversity and divergence in the diploid cultivated species, and establish a foundation for understanding the contribution of introgression and/or strong parallel selection to the extensive morphological similarities shared between species.
DOI: 10.5281/zenodo.7199897
title: Methods for structural variant detection with long-read sequencing data

description: SV calls from different long-read based SV callers on sequencing data. SV results evaluated in Methods for structural variant detection with long-read sequencing data. NA24385_Pacbio_HiFi -&gt; HiFi_L1 in paper NA24385_Pacbio_MtSinai -&gt; CLR_L1 in paper NA24385_Pacbio_CLR_SRX7668835 -&gt; CLR_L2 in paper NA24385_Pacbio_CLR_SRX6719924 -&gt; CLR_L3 in paper NA24385_ONT_Promethion -&gt; Nano_L1 in paper
description: This work was supported by the NIH NIGMS Maximizing Investigators' Research Award (MIRA) R35 GM146960 to X.Z.
DOI: 10.5281/zenodo.7199896
title: Methods for structural variant detection with long-read sequencing data

description: SV calls from different long-read based SV callers on sequencing data. SV results evaluated in Methods for structural variant detection with long-read sequencing data. NA24385_Pacbio_HiFi -&gt; HiFi_L1 in paper NA24385_Pacbio_MtSinai -&gt; CLR_L1 in paper NA24385_Pacbio_CLR_SRX7668835 -&gt; CLR_L2 in paper NA24385_Pacbio_CLR_SRX6719924 -&gt; CLR_L3 in paper NA24385_ONT_Promethion -&gt; Nano_L1 in paper
description: This work was supported by the NIH NIGMS Maximizing Investigators' Research Award (MIRA) R35 GM146960 to X.Z.
DOI: 10.6084/m9.figshare.21347568
title: Supplementary Data for: Dual domestication, diversity, and differential introgression in Old World cotton diploids

description: Domestication in the cotton genus is remarkable in that it has occurred independently four different times at two different ploidy levels. Relatively little is known about genome evolution and domestication in the cultivated diploid species<em> Gossypium herbaceum</em> and <em>G. arboreum</em>, due to the absence of wild representatives for the latter species, their ancient domestication, and their joint history of human-mediated dispersal and interspecific gene flow. Using in-depth resequencing of a broad sampling from both species, we provide support for their independent domestication, as opposed to a progenitor-derivative relationship, showing that diversity (mean π = 6×10-3) within species is similar, and that divergence between species is modest (FST=0.413). Individual accessions were homozygous for ancestral SNPs at over half of variable sites, while fixed, derived sites were at modest frequencies. Notably, two chromosomes with a paucity of fixed, derived sites (<em>i.e</em>., chromosomes 7 and 10) were also strongly implicated as having experienced high levels of introgression. Collectively, these data demonstrate variable permeability to introgression among chromosomes, which we propose is due to divergent selection under domestication and/or the phenomenon of F2 breakdown in interspecific crosses. Our analyses provide insight into the evolutionary forces that shape diversity and divergence in the diploid cultivated species, and establish a foundation for understanding the contribution of introgression and/or strong parallel selection to the extensive morphological similarities shared between species.
DOI: 10.5281/zenodo.7216125
title: Irish Drought Impacts Database v.1.0 (IDID)

description: The Irish Drought Impacts Database (IDID) presents information from drought related newspaper articles for the island of Ireland, covering the period 1733 – 2019, collected through systematic searching of the Irish Newspaper Archive. These articles were identified, assessed and categorized using a modified version of the classification scheme employed by the European Drought Impact Inventory (EDII) (Stahl et al. 2012). The IDID provides information on the documented temporal and geographical extent of drought events, their socio-economic and political contexts, their consequences and mitigation strategies employed. Temporal information includes the newspaper publication date, timing and duration of drought periods and timing of impacts. Spatial details are provided on three different levels; in addition to Nomenclature of Territorial Units for Statistics Level 2 (Nuts2) regions, county location and, if available, a more localized place name (e.g., town or city name) is also recorded. The database allows the analysis of long-term patterns in drought incidence and impacts as well as offering insights into the impacts of individual drought events over nearly three centuries of Ireland’s history. Spatially specific data provide an opportunity for further exploration of the differential vulnerability of various geographical locations, which may vary depending on biophysical conditions, economic, political and societal context. Textual excerpts offer further insight into the human experience and perception of drought and its impacts. The IDID therefore enables a better understanding of drought, vulnerability, and offers a new open access tool for multi-disciplinary investigation of drought on the island of Ireland.
description: Project: Irish Droughts: Environmental and Cultural Memories of a Neglected Hazard Project website: https://www.ucd.ie/droughtmemories/ Award/Grant title: Irish Research Council, Grant/Award Number: COALESCE/2019/43
description: {"references": ["Reference: Stahl, K. at al. (2012) A European Drought Impact Report Inventory (EDII): Design and Test for Selected Recent Droughts in Europe, DROUGHT-R&SPI Technical Report No. 3, 23 pp., available at: http://www.eu-drought.org/technicalreports/10814306/"]}
DOI: 10.5281/zenodo.7216270
title: The Missing Link Between Black Holes in High-Mass X-ray Binaries and Gravitational-Wave Sources: Observational Selection Effects

description: Data tables containing the calculated binary parameters used to acquire all results in arXiv:2210.01825v1. The file "xrb_params_illustris_z0.05_sample.csv" contains data for the z&lt;0.05 sampled population and the file xrb_params_illustris_z20_sample.csv contains data for the z&lt;20 sampled population.
DOI: 10.5281/zenodo.7216269
title: The Missing Link Between Black Holes in High-Mass X-ray Binaries and Gravitational-Wave Sources: Observational Selection Effects

description: Data tables containing the calculated binary parameters used to acquire all results in arXiv:2210.01825v1. The file "xrb_params_illustris_z0.05_sample.csv" contains data for the z&lt;0.05 sampled population and the file xrb_params_illustris_z20_sample.csv contains data for the z&lt;20 sampled population.
DOI: 10.5281/zenodo.7215697
title: BeEM source code and dataset

description: BeEM-master.zip: C++ source code for BeEM. mmcif.zip: 2218 mmCIF format structures used to benchmark BeEM.
DOI: 10.5281/zenodo.7215696
title: BeEM source code and dataset

description: BeEM-master.zip: C++ source code for BeEM. mmcif.zip: 2218 mmCIF format structures used to benchmark BeEM.
DOI: 10.5066/p9fcbohg
title: Pesticide Concentrations Measured in Zooplankton Samples Collected from the Sacramento River and Yolo Bypass, California, 2021

description: Zooplankton samples were collected at one site upstream of the Yolo Bypass in Northern California, three sites within the Bypass, and at a comparison site on the Sacramento River below the city of Sacramento and analyzed for a large suite of current-use pesticides and degradates. Samples were collected every two weeks from early August 2021 to mid-October 2021. Samples were collected by towing a 150-micron conical plankton net for 5 minutes by boat at each site. In the laboratory, zooplankton samples were filtered through a 63-micrometer sieve to separate the zooplankton and vegetation/detritus from the water. Large sticks, twigs, rocks, and leaves were rinsed with organic free water into the sieve and then discarded. The remaining mass in the sieve was transferred into 50 milliliter plastic centrifuge tubes, frozen overnight at -20 degrees Celsius, dehydrated completely using a freeze dryer, and then stored at -20 degrees Celsius. Immediately prior to analysis, each freeze-dried sample was homogenized and sub-sampled to a targeted final weight of 0.5 grams. Sub-samples were further homogenized with magnesium sulfate and extracted with acetonitrile at 100 degrees Celsius using an EDGE Automated Extraction System. Extracts were cleaned up using activated carbon and evaporated to 200 microliters in acetonitrile. Each sample had internal standards added, and was analyzed by gas chromatography-tandem mass spectrometry for 29 pesticides and by liquid chromatography tandem mass spectrometry for 137 pesticides. A total of 18 pesticides were detected in the zooplankton samples, and 25 of the 31 samples collected contained multiple pesticides (maximum of 12 per sample). The most frequently detected compounds in zooplankton were azoxystrobin, bifenthrin, fluridone, p,p’-DDD, p,p’-DDE, permethrin, and thiobencarb.
DOI: 10.5281/zenodo.7216398
title: Five whys study data

description: Five whys study
DOI: 10.5281/zenodo.7216397
title: Five whys study data

description: Five whys study
DOI: 10.34740/kaggle/dsv/4342285
title: Solar Energy Northeast Brazil
DOI: 10.6073/pasta/39cad31e71abeea08a20523d85ea5430
title: Map of Soil Organic Carbon: Region of Murcia (Spain)

description: This data package contain four soil organic carbon (SOC) maps resulted from the best data-model agreement of the analysis carried out in the frame of the Ph.D. Thesis ‘MODELING ORGANIC CARBON FOR QUANTIFICATION OF RESERVOIRS IN TERRESTRIAL ECOSYSTEMS AT THE NATIONAL LEVEL’ (Pilar Durante). Theses maps correspond to the estimates of SOC concentration (SOCc, g/kg) and SOC stocks (SOCs, tC/ha), and their associated spatially explicit uncertainties maps, for the Region of Murcia at 0-30 cm and 100 m spatial resolution. To achieve this, we evaluated four different digital soil mapping (DSM) approaches to estimate SOCc and SOCs for the Region of Murcia (11,313 km2), a topographic and climatic complex area in southern Iberian Peninsula, at three spatial resolutions (100m, 250m, 1000m). Using a local SOC database (255 soil profiles), we founded that a Quantile Regression Forest (QRF) approach had the best data-model agreement at 100 m spatial resolution, with the best balance of accuracy, external validation, and interpretability. The QRF model showed a mean SOCc of 12.18 g/kg with an overall uncertainty of 10.54 g/kg and an accuracy percentage of 79%; meanwhile the mean SOCs was 27,572 GgC with an uncertainty of 0.016 GgC. The analysis showed that using local environmental covariates and local soil information to predict SOC within this region resulted in a relative improvement between ~40% (for SOCc) and ~65% (for SOCs) when compared with SOC products derived from national and global databases. Our results provided evidence that large discrepancy exists between national and global estimates for reporting SOC at a local scale. Consequently, local-to-regional efforts are needed to better describe SOC spatial variability to reduce uncertainty and improve the assessment of soil resources.
DOI: 10.18434/mds2-2526
title: KAIROS Evaluation Software
DOI: 10.5517/ccdc.csd.ccvg2x8
title: CCDC 788110: Experimental Crystal Structure Determination

description: Related Article: Ruchi Gau, Lallan Mishra|2022|J.Mol.Struct.|1273|134271|doi:10.1016/j.molstruc.2022.134271
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26twyw
title: CCDC 2050679: Experimental Crystal Structure Determination

description: Related Article: Daniel Komisarek, Marc Pallaske, Vera Vasylyeva|2021|Z.Anorg.Allg.Chem.|647|984|doi:10.1002/zaac.202100012
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27dqp2
title: CCDC 2067814: Experimental Crystal Structure Determination

description: Related Article: M. Moreno-Alvero, F. Luna-Giles, F.J. Barros-García, E. Viñuelas-Zahínos, M.C. Fernández-Calderón|2021|Polyhedron|207|115390|doi:10.1016/j.poly.2021.115390
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27dqr4
title: CCDC 2067816: Experimental Crystal Structure Determination

description: Related Article: M. Moreno-Alvero, F. Luna-Giles, F.J. Barros-García, E. Viñuelas-Zahínos, M.C. Fernández-Calderón|2021|Polyhedron|207|115390|doi:10.1016/j.poly.2021.115390
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27zyjq
title: CCDC 2085324: Experimental Crystal Structure Determination

description: Related Article: Roya Karimi Alavijeh, Kamran Akhbari, Jonathan M. White|2022|CrystEngComm|24|7125|doi:10.1039/D2CE01258H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27zykr
title: CCDC 2085325: Experimental Crystal Structure Determination

description: Related Article: Roya Karimi Alavijeh, Kamran Akhbari, Jonathan M. White|2022|CrystEngComm|24|7125|doi:10.1039/D2CE01258H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28y9zj
title: CCDC 2113548: Experimental Crystal Structure Determination

description: Related Article: Chafai Boukentoucha, Ramzi Maadadi, Ali Benosmane, Ali Benboudiaf, Cherif Behloul, Abdelmadjid Kherrouba, Abdelmalek Bouraiou, Hocine Merazig|2022|J.Mol.Struct.|1260|132752|doi:10.1016/j.molstruc.2022.132752
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.