cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18758385
title: Datasets required for the production of the study entitled: "Beta diversity and rarity assessment of sessile cryptobenthic communities across depth and islands can inform coral reef conservation."

description: Datasets required for the production of the study entitled: “Beta diversity and rarity assessment of sessile cryptobenthic communities across depth and islands can inform coral reef conservation.”

Code for data analysis is available at: https://github.com/BaptisteFrattini/MESO_ARMS_2024.git

Aim: This study investigates a poorly known component of coral reefs, the cryptobiome, species that live hidden within the reef matrix, essential for reef functioning and productivity. It focuses on patterns of diversity and rarity of sessile cryptobenthic communities across Mascarene islands, and across shallow and mesophotic habitats (in deep low-light conditions). It aims to: (i) assess community uniqueness and local extinction risks for conservation, (ii) evaluate taxonomic overlap between mesophotic and shallow communities to explore mesophotic habitats as refugia for degrading shallow reefs. 

Location: Reunion and Rodrigues islands, Mascarene Archipelago, south-west Indian Ocean

Method: 44 Autonomous Reef Monitoring Structures (ARMS) were deployed on outer reef slopes in Reunion (~11 m and ~51 m depths) and in Rodrigues (~11 m depth). 704 ARMS plate photographs were analyzed using a point counting method, and 141 morphospecies (MSPs) were distinguished. Analyses included alpha, beta and gamma diversity, rarity, and taxonomic overlap.

Results: Sessile cryptobenthic communities from Rodrigues and mesophotic habitats were characterized by unique MSP composition, higher spatial heterogeneity, and elevated rarity indices. A strong species turnover was observed between shallow and mesophotic habitats, and taxonomic overlap assessment revealed that two-thirds of the MSPs were habitat-exclusive, while only one-quarter were common and shared across habitats.

Main conclusions: We highlight the uniqueness and rarity of sessile cryptobenthic communities in mesophotic habitats and in shallow habitats on the southwest coast of Reunion and in Rodrigues, and the need to consider broad geographical coverage in conservation strategies to account for their spatial heterogeneity and uniqueness. The low proportion of shallow-water MSPs found in deeper habitats argues against the deep reef refugia hypothesis for sessile cryptobenthic communities in Reunion. Each habitat holds a distinct conservation value that should be recognized independently.    

Keywords

ARMS, Coral Reefs, Mesophotic Coral Ecosystem, Deep Reef Refugia, Distribution, Uniqueness, Ascidiacea, Bryozoa, Porifera
DOI: 10.5281/zenodo.18758386
title: Datasets required for the production of the study entitled: "Beta diversity and rarity assessment of sessile cryptobenthic communities across depth and islands can inform coral reef conservation."

description: Datasets required for the production of the study entitled: “Beta diversity and rarity assessment of sessile cryptobenthic communities across depth and islands can inform coral reef conservation.”

Code for data analysis is available at: https://github.com/BaptisteFrattini/MESO_ARMS_2024.git

Aim: This study investigates a poorly known component of coral reefs, the cryptobiome, species that live hidden within the reef matrix, essential for reef functioning and productivity. It focuses on patterns of diversity and rarity of sessile cryptobenthic communities across Mascarene islands, and across shallow and mesophotic habitats (in deep low-light conditions). It aims to: (i) assess community uniqueness and local extinction risks for conservation, (ii) evaluate taxonomic overlap between mesophotic and shallow communities to explore mesophotic habitats as refugia for degrading shallow reefs. 

Location: Reunion and Rodrigues islands, Mascarene Archipelago, south-west Indian Ocean

Method: 44 Autonomous Reef Monitoring Structures (ARMS) were deployed on outer reef slopes in Reunion (~11 m and ~51 m depths) and in Rodrigues (~11 m depth). 704 ARMS plate photographs were analyzed using a point counting method, and 141 morphospecies (MSPs) were distinguished. Analyses included alpha, beta and gamma diversity, rarity, and taxonomic overlap.

Results: Sessile cryptobenthic communities from Rodrigues and mesophotic habitats were characterized by unique MSP composition, higher spatial heterogeneity, and elevated rarity indices. A strong species turnover was observed between shallow and mesophotic habitats, and taxonomic overlap assessment revealed that two-thirds of the MSPs were habitat-exclusive, while only one-quarter were common and shared across habitats.

Main conclusions: We highlight the uniqueness and rarity of sessile cryptobenthic communities in mesophotic habitats and in shallow habitats on the southwest coast of Reunion and in Rodrigues, and the need to consider broad geographical coverage in conservation strategies to account for their spatial heterogeneity and uniqueness. The low proportion of shallow-water MSPs found in deeper habitats argues against the deep reef refugia hypothesis for sessile cryptobenthic communities in Reunion. Each habitat holds a distinct conservation value that should be recognized independently.    

Keywords

ARMS, Coral Reefs, Mesophotic Coral Ecosystem, Deep Reef Refugia, Distribution, Uniqueness, Ascidiacea, Bryozoa, Porifera
DOI: 10.15468/dl.5zrztt
title: Occurrence Download

description: A dataset containing 262 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation)",
 "Country is Morocco",
 "TaxonKey is Cedrus atlantica"
 ]
}

 The dataset includes 262 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007212-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2jfx74
title: CCDC 2337066: Experimental Crystal Structure Determination

description: Related Article: Ruo-Dan Tian, Meng-Ke Sheng, Ying-Fei Zhao, Chun-Nan Wen, Miao Liu, Bing-Ji Ma|2024|Phytochem.Lett.|62|14|doi:10.1016/j.phytol.2024.06.002
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jtwz7
title: CCDC 2348590: Experimental Crystal Structure Determination

description: Related Article: Anastasiya O. Brovko, Natalya V. Kuratieva, Denis P. Pishchur, Gennadiy A. Kostin|2024|Molecules|29|4039|doi:10.3390/molecules29174039
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jtx09
title: CCDC 2348591: Experimental Crystal Structure Determination

description: Related Article: Anastasiya O. Brovko, Natalya V. Kuratieva, Denis P. Pishchur, Gennadiy A. Kostin|2024|Molecules|29|4039|doi:10.3390/molecules29174039
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2klzsy
title: CCDC 2371741: Experimental Crystal Structure Determination

description: Related Article: Sarfaraz Ali, Patrick M. McCosker, Anthony C. Willis, Stephen G. Pyne, Christopher Richardson, John B. Bremner, Paul A. Keller|2024|Molecules|29|4242|doi:10.3390/molecules29174242
description: Related Article: Patrick M. McCosker, Nicholas M. Butler, Alireza Shakoori, Michel K. Volland, Matthew J. Perry, Jesse W. Mullen, Anthony C. Willis, Timothy Clark, John B. Bremner, Dirk M. Guldi, Paul A. Keller|2021|Chem.-Eur.J.|27|3708|doi:10.1002/chem.202003662
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2klzv0
title: CCDC 2371743: Experimental Crystal Structure Determination

description: Related Article: Sarfaraz Ali, Patrick M. McCosker, Anthony C. Willis, Stephen G. Pyne, Christopher Richardson, John B. Bremner, Paul A. Keller|2024|Molecules|29|4242|doi:10.3390/molecules29174242
description: Related Article: Patrick M. McCosker, Nicholas M. Butler, Alireza Shakoori, Michel K. Volland, Matthew J. Perry, Jesse W. Mullen, Anthony C. Willis, Timothy Clark, John B. Bremner, Dirk M. Guldi, Paul A. Keller|2021|Chem.-Eur.J.|27|3708|doi:10.1002/chem.202003662
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kpbtf
title: CCDC 2374005: Experimental Crystal Structure Determination

description: Related Article: Sarfaraz Ali, Patrick M. McCosker, Anthony C. Willis, Stephen G. Pyne, Christopher Richardson, John B. Bremner, Paul A. Keller|2024|Molecules|29|4242|doi:10.3390/molecules29174242
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.48580/dfxrb.v21
title: The FinBIF checklist of Finnish species
DOI: 10.5281/zenodo.18595467
title: 3D-TREES-PAN: A LiDAR Point Cloud Dataset for Forest Structure Instance-Level Tree Panoptic Segmentation

description: This repository includes the key results and datasets used in the study "3D-TREES-PAN: A LiDAR Point Cloud Dataset for Forest Structure Instance-Level Tree Panoptic Segmentation". A selection of datasets is available here, certain larger data files are available upon request from the corresponding author due to their size. This collection provides comprehensive resources for the development, evaluation, and benchmarking of panoptic segmentation methods in forest environments. Currently, asociated article currently "Under Review"
DOI: 10.5281/zenodo.18758700
title: 3D-TREES-PAN: A LiDAR Point Cloud Dataset for Forest Structure Instance-Level Tree Panoptic Segmentation

description: This repository includes the key results and datasets used in the study "3D-TREES-PAN: A LiDAR Point Cloud Dataset for Forest Structure Instance-Level Tree Panoptic Segmentation". A selection of datasets is available here, certain larger data files are available upon request from the corresponding author due to their size. This collection provides comprehensive resources for the development, evaluation, and benchmarking of panoptic segmentation methods in forest environments. Currently, asociated article currently "Under Review"
DOI: 10.15468/dl.8ebdca
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mustelirallus erythrops",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2026",
 "Country is Colombia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 79 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007214-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31399332
title: Preoperative hypocalcemia predicts postoperative complications in older orthopedic patients: A multicenter cohort study

description: Background: Serum calcium, a key biochemical marker in the body, plays a crucial role in maintaining bone health. Nevertheless, research exploring the link between preoperative serum calcium levels and the occurrence of postoperative complications in elderly orthopedic patients is currently lacking. Aims: This study sought to assess the ability of preoperative serum calcium levels to predict the occurrence of postoperative complications in geriatric orthopedic surgery. Methods: We utilized multivariate logistic regression to identify correlations between serum calcium levels and complications. Generalized additive models to analyze the dose-response relationship with curve fitting and threshold effect evaluation. Subgroup analyses further evaluated the impact of other covariates. Results: This study included 690 elderly patients undergoing orthopedic surgery. Common postoperative complications primarily included infection, hypoproteinemia, and electrolyte imbalance, etc. The study demonstrated that preoperative serum calcium levels were an independent protective factor against postoperative complications (OR: 0.24, CI: 0.07-0.76, P = 0.036). When comparing groups based on serum calcium tertiles, patients in the low calcium group exhibited a 79% higher risk of complications compared to the high calcium group (OR = 1.79, 95% CI: 1.12-2.78). Further nonlinear relationship analysis revealed a threshold effect between serum calcium and postoperative complication risk, with a turning point at 2.4 mmol/L. The association was statistically significant below this value but not above it. Subgroup analyses and interaction tests showed that age, gender, comorbidities, and medications, cognition function, cardiac function, and Surgical complexity were not significantly associated with this correlation (interaction P &gt; 0.05). Conclusion: Preoperative calcium screening and correction may represent a simple, low-cost strategy to reduce postoperative complications in elderly orthopedic patients. This study provides evidence for the importance of actively correcting calcium levels before surgery and establishes the value of serum calcium as an early warning indicator for poor prognosis.
DOI: 10.6084/m9.figshare.31399332.v1
title: Preoperative hypocalcemia predicts postoperative complications in older orthopedic patients: A multicenter cohort study

description: Background: Serum calcium, a key biochemical marker in the body, plays a crucial role in maintaining bone health. Nevertheless, research exploring the link between preoperative serum calcium levels and the occurrence of postoperative complications in elderly orthopedic patients is currently lacking. Aims: This study sought to assess the ability of preoperative serum calcium levels to predict the occurrence of postoperative complications in geriatric orthopedic surgery. Methods: We utilized multivariate logistic regression to identify correlations between serum calcium levels and complications. Generalized additive models to analyze the dose-response relationship with curve fitting and threshold effect evaluation. Subgroup analyses further evaluated the impact of other covariates. Results: This study included 690 elderly patients undergoing orthopedic surgery. Common postoperative complications primarily included infection, hypoproteinemia, and electrolyte imbalance, etc. The study demonstrated that preoperative serum calcium levels were an independent protective factor against postoperative complications (OR: 0.24, CI: 0.07-0.76, P = 0.036). When comparing groups based on serum calcium tertiles, patients in the low calcium group exhibited a 79% higher risk of complications compared to the high calcium group (OR = 1.79, 95% CI: 1.12-2.78). Further nonlinear relationship analysis revealed a threshold effect between serum calcium and postoperative complication risk, with a turning point at 2.4 mmol/L. The association was statistically significant below this value but not above it. Subgroup analyses and interaction tests showed that age, gender, comorbidities, and medications, cognition function, cardiac function, and Surgical complexity were not significantly associated with this correlation (interaction P &gt; 0.05). Conclusion: Preoperative calcium screening and correction may represent a simple, low-cost strategy to reduce postoperative complications in elderly orthopedic patients. This study provides evidence for the importance of actively correcting calcium levels before surgery and establishes the value of serum calcium as an early warning indicator for poor prognosis.
DOI: 10.15468/dl.mcamz8
title: Occurrence Download

description: A dataset containing 1389 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "Country is Benin",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Anacardium",
 "Year 1992-2025"
 ]
}

 The dataset includes 1389 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007215-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48580/dfkx.v195
title: National Checklist of all species occurring in Denmark
DOI: 10.15468/dl.ur44y3
title: Occurrence Download

description: A dataset containing 461 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lithobates palmipes",
 "Country is Colombia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 461 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007217-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18150/zdny8d
title: Determinants_of_ Exchange_Rates_database

description: Data cover the period from January, 2012, to December, 2024 (monthly data).5 csv files include:-) the logarithmic returns for five major currency pairs: EURUSD, GBPUSD, USDCHF, USDJPY, and USDCAD-) set of explanatory variables (described in the file Variables.pdf).
DOI: 10.5281/zenodo.18758467
title: Mopo Baltic case study VRE data

description: This dataset provides simulated hourly wind and solar PV generation time series used in the Mopo project for the Baltic case study. The modeling framework follows https://doi.org/10.5281/zenodo.17950647 (validated in Nayak et al. (2025)).




The file "MOPO_Baltic_polygons" shows the simulated onshore regions on a map. The offshore regions are the same as in the related pan-European data (see the Zenodo link above).

The following VRE technologies are simulated:



Solar PV: 3 simulated PV technologies.

Offshore wind: 4 specific technologies (2 bottom‑fixed (FB) and 2 floating (FO)) (there is no existing offshore wind in the Baltic countries).

Onshore wind: 9 specific technologies plus an “existing” configuration.


“Existing” runs represent installations characteristic of 2020 in the analyzed regions, while “specific technology” runs represent possible future VRE installations. See https://doi.org/10.5281/zenodo.17950647 for more details about the simulated VRE technologies and regions.

Compared to the pan-European runs in the Mopo project, this upload considers a higher geographical resolution for the Baltic countries. In addition, a 5 min resolution wind run is carried out to demonstrate sub-hourly simulation capabilities (see folder "WindPower_5min_run"). The 5 min resolution run considers the following technologies: Existing wind installations (only onshore for the Baltic countries) and the SP370 HH 155 offshore and SP277 HH100 onshore wind technolgy to represent future installations. The 5 min resolition is obtained by extending the hourly resolution wind speed time series (see Nayak et al. (2025)) with the stochastic simulation methdology shown in (Murcia Leon, 2021).
DOI: 10.5281/zenodo.18758466
title: Mopo Baltic case study VRE data

description: This dataset provides simulated hourly wind and solar PV generation time series used in the Mopo project for the Baltic case study. The modeling framework follows https://doi.org/10.5281/zenodo.17950647 (validated in Nayak et al. (2025)).




The file "MOPO_Baltic_polygons" shows the simulated onshore regions on a map. The offshore regions are the same as in the related pan-European data (see the Zenodo link above).

The following VRE technologies are simulated:



Solar PV: 3 simulated PV technologies.

Offshore wind: 4 specific technologies (2 bottom‑fixed (FB) and 2 floating (FO)) (there is no existing offshore wind in the Baltic countries).

Onshore wind: 9 specific technologies plus an “existing” configuration.


“Existing” runs represent installations characteristic of 2020 in the analyzed regions, while “specific technology” runs represent possible future VRE installations. See https://doi.org/10.5281/zenodo.17950647 for more details about the simulated VRE technologies and regions.

Compared to the pan-European runs in the Mopo project, this upload considers a higher geographical resolution for the Baltic countries. In addition, a 5 min resolution wind run is carried out to demonstrate sub-hourly simulation capabilities (see folder "WindPower_5min_run"). The 5 min resolution run considers the following technologies: Existing wind installations (only onshore for the Baltic countries) and the SP370 HH 155 offshore and SP277 HH100 onshore wind technolgy to represent future installations. The 5 min resolition is obtained by extending the hourly resolution wind speed time series (see Nayak et al. (2025)) with the stochastic simulation methdology shown in (Murcia Leon, 2021).
DOI: 10.21410/7e4/scewbh
title: Enquête électorale française 2024 (ENEF 2024), Vague 4

description: Ce dispositif de suivi et de mesure de l’opinion permet l’analyse des évolutions de l’électorat français et de ses réactions aux événements politiques, sociaux et économiques à travers 7 vagues concernant les élections européennes et législatives de 2024. Il fournit une série d’indicateurs et de mesures sur les tendances de l’électorat français, ses valeurs politiques et ses préférences partisanes. L'enquête détaille les ressorts psychologiques de la décision électorale à la lumière des valeurs des Français et des contextes politiques, géographiques et socio-économiques. Elle permet également des analyses détaillées sur les rapports avec l’Union Européenne.  L'enquête est en continuum de l'Enquête électorale française 2017  et l'Enquête électorale française 2019 qui a repris une partie de ses enquêtés. Cette quatrième vague a été réalisée en avril 2024, avant les élections européennes de Juin 2024 ; 10 651 personnes inscrites sur les listes électorales y ont participé.