cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.ks546
title: Data from: Demographic and spatiotemporal patterns of avian influenza infection at the continental scale, and in relation to annual life cycle of a migratory host

description: Since the spread of highly pathogenic avian influenza (HPAI) H5N1 in the
 eastern hemisphere, numerous surveillance programs and studies have been
 undertaken to detect the occurrence, distribution, or spread of avian
 influenza viruses (AIV) in wild bird populations worldwide. To identify
 demographic determinants and spatiotemporal patterns of AIV infection in
 long distance migratory waterfowl in North America, we fitted generalized
 linear models with binominal distribution to analyze results from 13,574
 blue-winged teal (Anas discors, BWTE) sampled in 2007 to 2010 year round
 during AIV surveillance programs in Canada and the United States. Our
 analyses revealed that during late summer staging (July-August) and fall
 migration (September-October), hatch year (HY) birds were more likely to
 be infected than after hatch year (AHY) birds, however there was no
 difference between age categories for the remainder of the year (winter,
 spring migration, and breeding period), likely due to maturing immune
 systems and newly acquired immunity of HY birds. Probability of infection
 increased non-linearly with latitude, and was highest in late summer prior
 to fall migration when densities of birds and the proportion of
 susceptible HY birds in the population are highest. Birds in the Central
 and Mississippi flyways were more likely to be infected compared to those
 in the Atlantic flyway. Seasonal cycles and spatial variation of AIV
 infection were largely driven by the dynamics of AIV infection in HY
 birds, which had more prominent cycles and spatial variation in infection
 compared to AHY birds. Our results demonstrate demographic as well as
 seasonal, latitudinal and flyway trends across Canada and the US, while
 illustrating the importance of migratory host life cycle and age in
 driving cyclical patterns of prevalence.
description: BWTE_dataDryad_Nallar_PLOS_BWTE_data.csv
DOI: 10.1594/pangaea.956890
title: Element analyses of peat core CEN-17.4 from the central Congo peatlands

description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.979848
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXIV/4 (PS71), North Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXIV/4 (2008-04-18 to 2008-05-20). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.979245
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ARK-XXV/3 (PS76), Baffin Bay, Arctic Ocean

description: Multibeam data were collected during RV Polarstern cruise ARK-XXV/3 (2010-08-01 to 2010-10-09). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.979246
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXVI/3 (PS75), Amundsen Sea, Southern Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXVI/3 (2010-01-29 to 2010-04-05). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.5061/dryad.mt240
title: Data from: Parasite infection alters nitrogen cycling at the ecosystem scale

description: Despite growing evidence that parasites often alter nutrient flows through
 their hosts and can comprise a substantial amount of biomass in many
 systems, whether endemic parasites influence ecosystem nutrient cycling,
 and which nutrient pathways may be important, remains conjectural. A
 framework to evaluate how endemic parasites alter nutrient cycling across
 varied ecosystems requires an understanding of: (1) parasite effects on
 host nutrient excretion, (2) ecosystem nutrient limitation, (3) effects of
 parasite abundance, host density, host functional role, and host excretion
 rate on nutrient flows, and (4) how this infection-induced nutrient flux
 compares to other pools and fluxes. Pathogens that significantly increase
 the availability of a limiting nutrient within an ecosystem should produce
 a measurable ecosystem-scale response. Here, we combined field-derived
 estimates of trematode parasite infections in aquatic snails with
 measurements of snail excretion and tissue stoichiometry to show that
 parasites are capable of altering nutrient excretion in their intermediate
 host snails (dominant grazers). We integrated laboratory measurements of
 host nitrogen excretion with field-based estimates of infection in an
 ecosystem model and compared these fluxes to other pools and fluxes of
 nitrogen as measured in the field. Eighteen nitrogen limited ponds were
 examined to determine if infection had a measurable effect on
 ecosystem-scale nitrogen cycling. Because of their low nitrogen content
 and high demand for host carbon, parasites accelerated the rate at which
 infected hosts excreted nitrogen to the water column in a dose-response
 manner, thereby shifting nutrient stoichiometry and availability at the
 ecosystem scale. Infection-enhanced fluxes of dissolved inorganic nitrogen
 were similar to other commonly important environmental sources of
 bioavailable nitrogen to the system. Additional field measurements within
 nitrogen-limited ponds indicated that nitrogen flux rates from the
 periphyton to the water column in high snail density/high infection ponds
 were up to 50% higher than low infection ponds. By altering host nutrient
 assimilation/excretion flexibility, parasites could play a widespread, but
 currently unrecognized, role in ecosystem nutrient cycling, especially
 when parasite and host abundances are high and hosts play a central role
 in ecosystem nutrient cycling.
description: Data_allRaw Data
DOI: 10.1594/pangaea.979247
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXVI/2 (PS75), Southern Ocean, South Pacific Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXVI/2 (2009-11-27 to 2010-01-26). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.979849
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ARK-XXIV/3 (PS74), Greenland Sea, Arctic Ocean

description: Multibeam data were collected during RV Polarstern cruise ARK-XXIV/3 (2009-08-05 to 2009-09-25). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.979850
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXIII/9 (PS69), Southern Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXIII/9 (2007-02-02 to 2007-04-10). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.979852
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXIII/7 (PS69), Southern Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXIII/7 (2006-08-24 to 2006-10-29). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.979853
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXIII/5 (PS69), South Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXIII/5 (2006-04-13 to 2006-06-12). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.979855
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXIII/1 (PS69), Bay of Biscay, North Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXIII/1 (2005-10-15 to 2005-11-17). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs, tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.5061/dryad.1234
title: Data from: Population genetics of Manihot esculenta ssp. flabellifolia gives insight into past distribution of xeric vegetation in a postulated forest refugium area in northern Amazonia

description: The Guianas have often been proposed as a forest refugium; however, this
 view has received little testing. Studies of population genetics of forest
 taxa suggest that the central part of French Guiana remained forested,
 while the southern part (currently forested) may have harboured more open
 vegetation. Insights into the population structure of species restricted
 to non-forested habitats can help test this hypothesis. Using six
 microsatellite loci, we investigated the population genetics of French
 Guianan accessions of Manihot esculenta ssp. flabellifolia, a taxon
 restricted to coastal savannas and to rocky outcrops in the densely
 forested inland. Coastal populations were highly differentiated from one
 another, and our data suggest a recent colonization of these savannas by
 M. esculenta ssp. flabellifolia in a west-to-east process. Coastal
 populations were strongly differentiated from inselberg populations,
 consistent with an ancient separation of these two groups, with no or low
 subsequent gene flow. This supports the hypothesis that the central part
 of the region may have remained forested since the last glacial maximum,
 impeding the establishment of Manihot. Contrary to coastal populations,
 inselberg Manihot populations were strikingly homogeneous, at a broad
 spatial scale. This suggests they were connected until recently, either by
 a large continuous savanna area, or by smaller, temporary disturbed areas
 shifting in space.
description: Genotypes.xlsMicrosatellite genotypes for Manihot esculenta ssp flabellifolia populations of French Guiana. All useful information is included in the file.Duputie.etal.MolEcol2009.DryadData.xls
DOI: 10.1594/pangaea.981083
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ARK-XIX/4a (PS64), Greenland Sea, Arctic Ocean

description: Multibeam data were collected during RV Polarstern cruise ARK-XIX/4a (2003-08-10 to 2003-09-20). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction by cross fan calibration and World Ocean Atlas 18 (https://www.ncei.noaa.gov/archive/accession/NCEI-WOA18), tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.958468
title: Ekiti agroforestry land use training data

description: GPS points were collected during July and August 2021 across all 15 Local Government Authorities in Ekiti State, Nigeria. All points were transcribed into an Excel spreadsheet and verified on a map using GEE. GPS points were collected using the GPS Dragon app on a mobile phone with accuracy of within three meters. The land use categories were based on Ashiagbor et al. (2020, doi:10.1016/j.rsase.2020.100349) research and included built-up area/bare land, agricultural land, agroforestry cocoa, full sun cocoa, plantations, primary forest, and secondary forest. 634 points were collected to represent all 7 land types were collected. The data was used for remote sensing analysis utilizing vegetation indices to assess the extent of cocoa agroforestry.
description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.958469
title: Ekiti agroforestry land use validation data

description: GPS points were collected during July and August 2021 across all 15 Local Government Authorities in Ekiti State, Nigeria. All points were transcribed into an Excel spreadsheet and verified on a map using GEE. GPS points were collected using the GPS Dragon app on a mobile phone with accuracy of within three meters. The land use categories were based on Ashiagbor et al. (2020, doi:10.1016/j.rsase.2020.100349) research and included built-up area/bare land, agricultural land, agroforestry cocoa, full sun cocoa, plantations, primary forest, and secondary forest. 634 points were collected to represent all 7 land types were collected. The data was used for remote sensing analysis utilizing vegetation indices to assess the extent of cocoa agroforestry.
description: This dataset has been carefully reviewed and curated in accordance with PANGAEA's exceptionally high quality standards. However, due to discontinued communication from the authors' side, it did not receive the usual formal approval by the authors and therefore lacks final scientific validation.
DOI: 10.1594/pangaea.943555
title: Multibeam bathymetry processed data (Kongsberg EM 122 entire dataset) of RRS JAMES CLARK ROSS during cruise JR17003a Antarctic Peninsula, Southern Ocean

description: Multibeam data were collected during RRS James Clark Ross cruise JR17003a (2018-02-18 to 2018-03-12). Multibeam sonar system was Kongsberg EM 122 multibeam echosounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs and World Ocean Atlas 09, tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional blockmedian grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
DOI: 10.1594/pangaea.981070
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXII/1 (PS67), Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXII/1 (2004-10-12 to 2004-11-04). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with cross fan calibration, tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.5061/dryad.1468
title: Data from: Population sizes and dispersal pattern of tsetse flies: rolling on the river?

description: The West African trypanosomoses are mostly transmitted by riverine species
 of tsetse fly . In this study, we estimate the dispersal and population
 size of tsetse populations located along the Mouhoun River in Burkina Faso
 where tsetse habitats are experiencing increasing fragmentation caused by
 human encroachment. Dispersal estimated through direct (mark and
 recapture) and indirect (genetic isolation by distance) methods appeared
 consistent with one another. In these fragmented landscapes, tsetse flies
 displayed localised, small sub-populations with relatively short effective
 dispersal. We discuss how such information is crucial for designing
 optimal strategies for eliminating this threat. To estimate ecological
 parameters of wild animal populations, the genetic measures are both a
 cost- and time-effective alternative to mark-release-recapture. They can
 be applied to other vector-borne diseases of medical and/or economic
 importance.
description: Genotypes.xlsMicrosatellite genotypes for Manihot esculenta ssp flabellifolia populations of French Guiana. All useful information is included in the file.Duputie.etal.MolEcol2009.DryadData.xls
DOI: 10.1594/pangaea.981061
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ANT-XXII/4 (PS67), Scotia Sea, South Atlantic Ocean

description: Multibeam data were collected during RV Polarstern cruise ANT-XXII/4 (2005-04-08 to 2005-05-21). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction with SV data from CTDs, tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.981086
title: Multibeam bathymetry processed data (Atlas Hydrosweep DS 2 echo sounder entire dataset) of RV POLARSTERN during cruise ARK-XVIII/2 (PS62), Fram Strait, Arctic Ocean

description: Multibeam data were collected during RV Polarstern cruise ARK-XVIII/2 (2002-08-19 to 2002-10-15). Multibeam sonar system was Atlas Hydrographic Hydrosweep DS 2 multibeam echo sounder. Data are processed with Caris HIPS, including sound velocity correction by cross fan calibration, tidal correction with TPXO9_atlas_v5 (https://www.tpxo.net), and manual cleaning. The soundings are combined in daily files, the format is XYZ ASCII ( ). Additional grids have been computed with depth dependent cell size to visualize the data. These grids are not meant for scientific analysis or navigation, but for overview purposes only.
description: These data should not be used for navigational purposes.