cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3406558.v1
title: A correction technique for false topographic perception of remote-sensing images based on an inverse topographic correction technique

description: The false topographic perception phenomenon (FTPP) refers to the visual misperception in remote-sensing images that certain types of terrains are visually interpreted as other types in rugged lands, for example, valleys as ridges and troughs as peaks. For this reason, the FTPP can influence the visualization and interpretation of images to a great extent. To scrutinize this problem, the paper firstly reviews and tests the existing FTPP-correction techniques and identifies the inverse slope-matching technique as an effective approach to visually enhance remote-sensing images and retain the colour information. The paper then proposes an improved FTPP-correction procedure that incorporates other image-processing techniques (e.g. linear stretch, histogram matching, and flat-area replacement) to enhance the performance of this technique. A further evaluation of the proposed technique is conducted by applying the technique to various study areas and using different types of remote-sensing images. The result indicates the method is relatively robust and will be a significant extension to geovisual analytics in digital earth research.
DOI: 10.6084/m9.figshare.3406540
title: Hyperbaric oxygen preconditioning: a reliable option for neuroprotection

description: Figure 1: Potential mechanisms involved in neruoprotection of HBO-PC.<br>Table 1: HBO-PC in animal models of acute brain injury<br><br><b>How to cite this article: </b><i>Hu Q, Manaenko A, Matei N, Guo Z, Xu T, Tang J, Zhang JH (2016) Hyperbaric oxygen preconditioning: a reliable option for neuroprotection. Med Gas Res 6(1):20-32.</i>
DOI: 10.6084/m9.figshare.3406540.v1
title: Hyperbaric oxygen preconditioning: a reliable option for neuroprotection

description: Figure 1: Potential mechanisms involved in neruoprotection of HBO-PC.<br>Table 1: HBO-PC in animal models of acute brain injury<br><br><b>How to cite this article: </b><i>Hu Q, Manaenko A, Matei N, Guo Z, Xu T, Tang J, Zhang JH (2016) Hyperbaric oxygen preconditioning: a reliable option for neuroprotection. Med Gas Res 6(1):20-32.</i>
DOI: 10.6084/m9.figshare.3406525
title: Safety of intrathecal transplantation of human umbilical cord mesenchymal stem cells for treating hereditary cerebellar ataxia: study protocol for a randomized controlled trial

description: Figure 1: Flow chart of the trial protocol. hUCMSCs: Human umbilical cord mesenchymal stem cells.<br>Figure 2: Timing of the trial outcome evaluation.<br>Table 1: Studies using umbilical cord mesenchymal stem cells (UCMSCs) recently published by the team led by Yi-hua An<br><br>An YH (2016) Safety of intrathecal transplantation of human umbilical cord mesenchymal stem cells for treating hereditary cerebellar ataxia: study protocol for a randomized controlled trial. Clin Transl Degener Dis 1(1):9-16.
DOI: 10.6084/m9.figshare.3406525.v1
title: Safety of intrathecal transplantation of human umbilical cord mesenchymal stem cells for treating hereditary cerebellar ataxia: study protocol for a randomized controlled trial

description: Figure 1: Flow chart of the trial protocol. hUCMSCs: Human umbilical cord mesenchymal stem cells.<br>Figure 2: Timing of the trial outcome evaluation.<br>Table 1: Studies using umbilical cord mesenchymal stem cells (UCMSCs) recently published by the team led by Yi-hua An<br><br>An YH (2016) Safety of intrathecal transplantation of human umbilical cord mesenchymal stem cells for treating hereditary cerebellar ataxia: study protocol for a randomized controlled trial. Clin Transl Degener Dis 1(1):9-16.
DOI: 10.6084/m9.figshare.3406516
title: Identification of a Novel NLRP12 Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing

description: Identification of a Novel <i>NLRP12 </i>Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing
DOI: 10.6084/m9.figshare.3406516.v1
title: Identification of a Novel NLRP12 Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing

description: Identification of a Novel <i>NLRP12 </i>Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing
DOI: 10.6084/m9.figshare.3406516.v2
title: Identification of a Novel NLRP12 Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing

description: Identification of a Novel <i>NLRP12 </i>Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing
DOI: 10.6084/m9.figshare.3406516.v3
title: Identification of a Novel NLRP12 Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing

description: Identification of a Novel <i>NLRP12 </i>Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing
DOI: 10.6084/m9.figshare.3406516.v4
title: Identification of a Novel NLRP12 Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing

description: Identification of a Novel <i>NLRP12 </i>Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing
DOI: 10.6084/m9.figshare.3406516.v5
title: Identification of a Novel NLRP12 Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing

description: Identification of a Novel <i>NLRP12 </i>Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing
DOI: 10.6084/m9.figshare.3406516.v6
title: Identification of a Novel NLRP12 Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing

description: Identification of a Novel <i>NLRP12 </i>Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing
DOI: 10.6084/m9.figshare.3406516.v7
title: Identification of a Novel NLRP12 Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing

description: Identification of a Novel <i>NLRP12 </i>Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing
DOI: 10.6084/m9.figshare.3406516.v8
title: Identification of a Novel NLRP12 Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing

description: Identification of a Novel <i>NLRP12 </i>Nonsense Mutation (Trp408X) in the Extremely Rare Disease FCAS by Exome Sequencing
DOI: 10.6084/m9.figshare.3406513
title: Trastuzumab preclinical SRMA - raw dataset

description: Excel file containing raw data used for publication: <b>The efficacy of trastuzumab in animal models of breast cancer: a systematic review and meta-analysis</b> Chen, Yang, Guo, Sena, Macleod, Yuan, Hirst<br>
DOI: 10.6084/m9.figshare.3406507.v1
title: GN.tiff

description: <b>Comparison on GN benchmarks. The NMI value is averaged over 10 networks generated with the same parameters.</b>
DOI: 10.6084/m9.figshare.3406477
title: Do emergency medicine journals promote trial registration and adherence to reporting guidelines?: A survey of "Instructions for Authors"

description: The objective of this study was to investigate the policies of Emergency Medicine journals concerning guideline adoption and clinical trial registration to understand the extent to which journals are using these mechanisms as a means to improve study quality and reporting.<br>
DOI: 10.6084/m9.figshare.3406477.v1
title: Data Sheet - ER Guidelines.xlsx

description: The objective of this study was to investigate the policies of Emergency Medicine journals concerning guideline adoption and clinical trial registration to understand the extent to which journals are using these mechanisms as a means to improve study quality and reporting.<br>
DOI: 10.6084/m9.figshare.3406477.v2
title: Do emergency medicine journals promote trial registration and adherence to reporting guidelines? A systematic review

description: The objective of this study was to investigate the policies of Emergency Medicine journals concerning guideline adoption and clinical trial registration to understand the extent to which journals are using these mechanisms as a means to improve study quality and reporting.<br>
DOI: 10.6084/m9.figshare.3406477.v4
title: Do emergency medicine journals promote trial registration and adherence to reporting guidelines? A systematic review

description: The objective of this study was to investigate the policies of Emergency Medicine journals concerning guideline adoption and clinical trial registration to understand the extent to which journals are using these mechanisms as a means to improve study quality and reporting.<br>
DOI: 10.6084/m9.figshare.3406477.v3
title: Do emergency medicine journals promote trial registration and adherence to reporting guidelines? A systematic review

description: The objective of this study was to investigate the policies of Emergency Medicine journals concerning guideline adoption and clinical trial registration to understand the extent to which journals are using these mechanisms as a means to improve study quality and reporting.<br>
DOI: 10.6084/m9.figshare.3406453
title: HIV mutation frequencies Pol, Bacheler et al data

description: Estimates for selection coefficients of transition mutations in pol region in HIV.
DOI: 10.6084/m9.figshare.3406453.v2
title: HIV mutation frequencies Pol, Bacheler et al data

description: Estimates for selection coefficients of transition mutations in pol region in HIV.
DOI: 10.6084/m9.figshare.3406453.v1
title: New draft item

description: Estimates for selection coefficients of transition mutations in pol region in HIV.
DOI: 10.6084/m9.figshare.3406282
title: TAT.ARC protein transduction or RNA interference with ARC impact on survival of primary cortical neurons subjected to 150 min oxygen-glucose deprivation (OGD): Lactate dehydrogenase activity was measured as a marker of cell membrane integrity loss and neuronal cell death 24 h afterwards.

description: Primary neuronal cultures were transduced with lentiviral particles for knockdown of apoptosis repressor with CARD domain (ARC) or non-targeting control or treated with TAT proteins for ARC or beta Galaktosidase before 150 min of oxygen glucose deprivation (OGD). Cell death was monitored by the release of lactate dehydrogenase (LDH) in the supernatant medium.
DOI: 10.6084/m9.figshare.3406135
title: Patient Perspectives on EMS Alternate Destination Models

description: <b>Introduction:</b> Studies have shown that a large number of ambulance transports to emergency departments (ED) could have been safely treated in an alternative environment, prompting interest in the development of more patient-centered models for prehospital care. We examined patient attitudes, perspectives, and agreement/comfort with alternate destinations and other proposed innovations in Emergency Medical Services (EMS) care delivery and determined whether demographic, socioeconomic, acuity, and EMS utilization history factors impact levels of agreement. <b>Methods:</b> We conducted a cross-sectional study on a convenience sample of patients and caregivers presenting to an urban academic ED between July 2012 and May 2013. Respondents were surveyed on levels of agreement with 13 statements corresponding to various aspects of a proposed patient-centered emergency response system including increased EMS access to healthcare records, shared decision making with the patient and/or primary care physician, transport to alternative destinations, and relative importance of EMS assessment versus transportation. Information on demographic and socioeconomic factors, level of acuity, and EMS utilization history were also determined via survey and chart review. Responses were analyzed descriptively and compared across patient characteristics using chi-square and regression analyses. <b>Results:</b> A total of 621 patients were enrolled. The percentage of patients who agreed or strongly agreed with each of the 13 statements ranged from 48.2 to 93.8%. About 86% agreed with increased EMS access to healthcare records; approximately 72% agreed with coordinating disposition decisions with a primary physician; and about 58% supported transport to alternative destinations for low acuity conditions. No association was found between levels of agreement and the patient's level of acuity or EMS utilization history. Only Black or Hispanic race showed isolated associations with lower rates of agreement with some aspects of an innovative EMS care delivery model. <b>Conclusion:</b> A substantial proportion of patients surveyed in this cross sectional study agreed with a more patient-centered approach to prehospital care where a 9-1-1 call could be met with a variety of treatment and transportation options. Agreement was relatively consistent among a diverse group of patients with varying demographics, levels of acuity and EMS utilization history. <b>MeSH Key words:</b> emergency medical services; triage; telemedicine; surveys and questionnaires; transportation of patients
DOI: 10.6084/m9.figshare.3406135.v1
title: Patient Perspectives on EMS Alternate Destination Models

description: <b>Introduction:</b> Studies have shown that a large number of ambulance transports to emergency departments (ED) could have been safely treated in an alternative environment, prompting interest in the development of more patient-centered models for prehospital care. We examined patient attitudes, perspectives, and agreement/comfort with alternate destinations and other proposed innovations in Emergency Medical Services (EMS) care delivery and determined whether demographic, socioeconomic, acuity, and EMS utilization history factors impact levels of agreement. <b>Methods:</b> We conducted a cross-sectional study on a convenience sample of patients and caregivers presenting to an urban academic ED between July 2012 and May 2013. Respondents were surveyed on levels of agreement with 13 statements corresponding to various aspects of a proposed patient-centered emergency response system including increased EMS access to healthcare records, shared decision making with the patient and/or primary care physician, transport to alternative destinations, and relative importance of EMS assessment versus transportation. Information on demographic and socioeconomic factors, level of acuity, and EMS utilization history were also determined via survey and chart review. Responses were analyzed descriptively and compared across patient characteristics using chi-square and regression analyses. <b>Results:</b> A total of 621 patients were enrolled. The percentage of patients who agreed or strongly agreed with each of the 13 statements ranged from 48.2 to 93.8%. About 86% agreed with increased EMS access to healthcare records; approximately 72% agreed with coordinating disposition decisions with a primary physician; and about 58% supported transport to alternative destinations for low acuity conditions. No association was found between levels of agreement and the patient's level of acuity or EMS utilization history. Only Black or Hispanic race showed isolated associations with lower rates of agreement with some aspects of an innovative EMS care delivery model. <b>Conclusion:</b> A substantial proportion of patients surveyed in this cross sectional study agreed with a more patient-centered approach to prehospital care where a 9-1-1 call could be met with a variety of treatment and transportation options. Agreement was relatively consistent among a diverse group of patients with varying demographics, levels of acuity and EMS utilization history. <b>MeSH Key words:</b> emergency medical services; triage; telemedicine; surveys and questionnaires; transportation of patients
DOI: 10.6084/m9.figshare.3406066
title: A shared numerical representation for action and perception. Final Version

description: The folder contains raw and tabulated data files for all the different experimental conditions.
DOI: 10.6084/m9.figshare.3406066.v1
title: New draft item

description: The folder contains raw and tabulated data files for all the different experimental conditions.
DOI: 10.6084/m9.figshare.3406066.v2
title: A shared numerical representation for action and perception. All exp

description: The folder contains raw and tabulated data files for all the different experimental conditions.
DOI: 10.6084/m9.figshare.3406066.v3
title: A shared numerical representation for action and perception. Final version.

description: The folder contains raw and tabulated data files for all the different experimental conditions.
DOI: 10.6084/m9.figshare.3406066.v5
title: A shared numerical representation for action and perception. Final Version

description: The folder contains raw and tabulated data files for all the different experimental conditions.
DOI: 10.6084/m9.figshare.3406066.v7
title: A shared numerical representation for action and perception. Final Version

description: The folder contains raw and tabulated data files for all the different experimental conditions.
DOI: 10.6084/m9.figshare.3406066.v6
title: A shared numerical representation for action and perception. Final Version

description: The folder contains raw and tabulated data files for all the different experimental conditions.
DOI: 10.6084/m9.figshare.3405991
title: Determinants for gallstone formation – a new data cohort study and a systematic review with meta-analysis*

description: <b>Objective:</b> Only few determinants of gallstone formation have been identified in cohort studies. The aim was to identify further determinants for gallstones in a Danish cohort and to perform a meta-analysis of results from existing cohorts. <b>Material and methods:</b> Data from a cohort study was used. Gallstone incidence was assessed through repeated ultrasound examinations. Body mass index (BMI), blood pressure, self-rated health, lifestyle variables, blood lipids, and use of female sex hormones were measured at the baseline examination. Statistical analyses included logistic regression. Based on a prospective protocol, a systematic review of the literature was performed identifying all articles dealing with determinants of incident gallstones. Meta-analyses of comparable determinants were performed through fixed effect models. <b>Results:</b> Participants with no gallstones at baseline and with at least one re-examination were followed-up completely (mean 11.6 years, <i>N</i> = 2848). The overall cumulative incidence of gallstones was 0.60% per year. Independent positive determinants for incident gallstones were age, female sex, non-high density lipoprotein (non-HDL) cholesterol, and gallbladder polyps. In addition, BMI was positively associated in men. The systematic review additionally identified associations for comorbidities, parity, and dietary factors. Meta-analysis confirmed the significant associations for incident gallstones and age, female sex, BMI, and non-HDL cholesterol. No significant associations were found for blood pressure, smoking, alcohol consumption, HDL cholesterol, or triglycerides in meta-analyses. <b>Conclusions:</b> Age, female sex, BMI, non-HDL cholesterol, and polyps are independent determinants for gallstone formation. Incident gallstones and the metabolic syndrome share common risk factors. More studies are needed for further exploration.
DOI: 10.6084/m9.figshare.3405991.v2
title: Determinants for gallstone formation – a new data cohort study and a systematic review with meta-analysis*

description: <b>Objective:</b> Only few determinants of gallstone formation have been identified in cohort studies. The aim was to identify further determinants for gallstones in a Danish cohort and to perform a meta-analysis of results from existing cohorts. <b>Material and methods:</b> Data from a cohort study was used. Gallstone incidence was assessed through repeated ultrasound examinations. Body mass index (BMI), blood pressure, self-rated health, lifestyle variables, blood lipids, and use of female sex hormones were measured at the baseline examination. Statistical analyses included logistic regression. Based on a prospective protocol, a systematic review of the literature was performed identifying all articles dealing with determinants of incident gallstones. Meta-analyses of comparable determinants were performed through fixed effect models. <b>Results:</b> Participants with no gallstones at baseline and with at least one re-examination were followed-up completely (mean 11.6 years, <i>N</i> = 2848). The overall cumulative incidence of gallstones was 0.60% per year. Independent positive determinants for incident gallstones were age, female sex, non-high density lipoprotein (non-HDL) cholesterol, and gallbladder polyps. In addition, BMI was positively associated in men. The systematic review additionally identified associations for comorbidities, parity, and dietary factors. Meta-analysis confirmed the significant associations for incident gallstones and age, female sex, BMI, and non-HDL cholesterol. No significant associations were found for blood pressure, smoking, alcohol consumption, HDL cholesterol, or triglycerides in meta-analyses. <b>Conclusions:</b> Age, female sex, BMI, non-HDL cholesterol, and polyps are independent determinants for gallstone formation. Incident gallstones and the metabolic syndrome share common risk factors. More studies are needed for further exploration.
DOI: 10.6084/m9.figshare.3405961
title: Wallaceochromis humilis and Pelvicachromis pulcher microCT images

description: MicroCT images of unstained heads of Wallaceochromis humilis, female, ZCUV-2015/6, SL 56,3 mm, and Pelvicachromis pulcher male, ZCUV-2015/4, SL 54.01 mm <br>TIFF image stacks (8-bit). <br>
DOI: 10.6084/m9.figshare.3405961.v3
title: Wallaceochromis humilis and Pelvicachromis pulcher microCT images

description: MicroCT images of unstained heads of Wallaceochromis humilis, female, ZCUV-2015/6, SL 56,3 mm, and Pelvicachromis pulcher male, ZCUV-2015/4, SL 54.01 mm <br>TIFF image stacks (8-bit). <br>
DOI: 10.6084/m9.figshare.3405961.v4
title: Wallaceochromis humilis and Pelvicachromis pulcher microCT images

description: MicroCT images of unstained heads of Wallaceochromis humilis, female, ZCUV-2015/6, SL 56,3 mm, and Pelvicachromis pulcher male, ZCUV-2015/4, SL 54.01 mm <br>TIFF image stacks (8-bit). <br>
DOI: 10.6084/m9.figshare.3405901
title: Diverse Nature of Forming Planets: A Combined Geo-/Astrophysics Approach

description: PhD proposal defence talk at ETH Department of Earth Sciences.
DOI: 10.6084/m9.figshare.3405901.v1
title: Diverse Nature of Forming Planets: A Combined Geo-/Astrophysics Approach

description: PhD proposal defence talk at ETH Department of Earth Sciences.