cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/bvt5swtc5h.1
title: Human neuronal networks on micro-electrode arrays are a highly robust tool to study disease-specific genotype-phenotype correlations in vitro

description: Micro-electrode arrays (MEAs) are increasingly used to characterize neuronal network activity of human induced pluripotent stem-cell (hiPSC)-derived neurons. Despite their gain in popularity, MEA recordings from hiPSC-derived neuronal networks are not always used to their full potential in respect to experimental design, execution and data analysis. Therefore, we benchmarked the robustness and sensitivity of MEA-derived neuronal activity patterns derived from ten healthy individual control lines. We provide recommendations on experimental design and analysis to achieve standardization. With such standardization, MEAs can be used as a reliable platform to distinguish (disease-specific) network phenotypes. In conclusion, we show that MEAs are a powerful and robust tool to uncover functional neuronal network phenotypes from hiPSC-derived neuronal networks, and provide an important resource to advance the hiPSC field towards the use of MEAs for disease-phenotyping and drug discovery.
DOI: 10.17632/6rfkswc7fm.1
title: Magnetic Theory and Mechanical Characteristics for ESS MEBT Quadrupole Magnet

description: The magnetic parameters  for the ESS MEBT magnet obtained from numerical simulations and Single Stretched Wire measurements by means of a standard multipole analysis are summarized in File 1. Characteristics of the mechanical model are introduced in File 2: 
1. "Magnetic_Field_Theory.pdf".   
2. "Mechanical_Model.pdf".
DOI: 10.17632/2ssdnr3nn5.1
title: Efficacy of the Metacognitive Training on symptom severity, neurocognition and social cognition in a sample of patients diagnosed with schizophrenia

description: The dataset contains data from the project "Efficacy of the Metacognitive Training on symptom severity, neurocognition and social cognition in a sample of patients diagnosed with schizophrenia: a single blind, randomised, controlled trial". The database indicates the missing data. Data imputation was completed using the Predictive Mean Matching (PMM) method.
Data were collected in two different psychiatric wards. Participants were randomized into intervention and control groups. Participants in the intervention group took part in a standard Metacognitive Training (MCT) along with psychiatric treatment as usual (TAU,), while patients in the control group only received TAU. Data were recorded at three time points: before MCT (T0), after MCT (T1) and after a six-month follow-up period (T2). The assessment time points are indicated in the column headings. IQ values shown were used to screen for inclusion criteria (IQ > 70). The database contains data from the following measures in that order:  Positive and Negative Syndrome Scale for Schizophrenia (PANSS) , Theory of Mind Picture Stories Task (ToM PST), Baron-Cohen Reading the Mind in the Eyes Test (RMET), Wisconsin Card Sorting Test (WCST), and Repeatable Battery for the Assessment of Neuropsychological Status (RBANS).    
Code dictionary of the dataset: 
Intervention_Control: 1= randomised to intervention group; 2= randomised to control group
Gender: 1= male; 2= female
Marital status: 1= single; 2= married; 3= divorced; 4= widowed; 5= in a relationship
Level of education: 1= less than primary education; 2= primary education; 3= vocational education; 4= high school diploma; 5= higher education
Occupational status: 1= supported job for psychiatric patients; 2= normal employment part-time; 3= normal employment full-time; 4= unemployed
Antipsychotic treatment: 1= yes, 2= no
DOI: 10.17632/nch932k7cj.1
title: Mendeley supplemental figure 1. Correlation between decline rates of serum cytokines and acute duration in the context of SJS/TEN. 

description: In the cohort treated with steroid monotherapy, decline rates of (A) IFN- γ and (B) IL-15 were tested, whereas decline rates of (C) granzyme B, (D) perforin, (E) IL-6, and (F) IL-18 were statistically examined in the group received combination therapy. The decline rate was calculated as (acute level - resolution level)/acute level × 100%. Data were represented as rank for each individual. Statistical significance was determined by Spearman rank correlation test.
DOI: 10.17632/mz5w4f79b7.1
title: The Psychometric Properties of Malay Language Adult Attention Deficit Hyperactivity Disorder (ADHD) Self-Report Scale (ASRS) and the Prevalence of Adult ADHD and its associated factors among inmates at Seremban Prison. 

description: Objective This study was performed to determine the psychometric properties of Malay language ASRS and to investigate the prevalence of adults with ADHD and its associated factors among inmates. Methods This is a cross-sectional study which investigated 200 inmates using ASRS, Depression Anxiety Stress Scale 21-items (DASS-21), Diagnostic Interview for ADHD in Adults version 2.0 (DIVA 2.0), and Mini International Neuropsychiatric Interview (MINI). Results The Malay language ASRS has good internal consistency (Cronbach’s α = 0.925 for total 18-items). The Cronbach’s α for inattention and hyperactivity/impulsivity subscale is 0.876 and 0.863 respectively. The ASRS and DIVA yielded significant association. The test-retest reliability yielded Cronbach’s α 0.847. The exploratory factor analysis showed that 1-factor solution as the best fit. The prevalence of adult ADHD is 8% which is low as compared to previous study. This study found association between adult ADHD and antisocial personality disorder and major depressive disorder. There is high prevalence of substance use disorder (87.5%) and antisocial personality disorder (81.30%) among adults with ADHD. Conclusion The Malay language ASRS has good psychometric properties but further study on its psychometric properties in general population is needed. Further studies on the prevalence of Adult ADHD at different prison and general population are invaluable for comparison.
DOI: 10.17632/2m69xh2fhs.1
title: iTRAQ paroxetine response

description: iTRAQ analysis of paroxetine responsive MDD patients and western blot validations
DOI: 10.17632/2kh2bdsp5b.3
title: File Carving based Digital Forensic Tools Testing Data Sets (Contiguous Files)

description: The test image is a NTFS file system and is intended to test data carving tools and their ability to extract various file formats. The image contains several allocated and deleted files that are all stored in contiguous format within its allocated space. All files are random files that that were in my possession or that I created from scratch. This image was created from a NAND USB thumb-drive that was wiped and formatted using the Forensic Toolkit FTK Imager with the file extension of AD1. The image has been eliminated with its meta data so that it cannot be mounted and therefore data carving methods must be used to extract the files. This test image is a 'raw' image (i.e. 'dd') of a NTFS file system. The file system is 2 GB. The MD5, SHA, file types, name of every file and all other details of the image are clearly mentioned in the .csv and .txt files attached to this data set. One can run the image against any data carving based tool and thus can cross check the obtained values with that of our image.
DOI: 10.17632/9p3kb6x4n7.1
title: Vibration datasets of beams subjected to free vibration using the smartphone's accelerometer

description: The vibration datasets were acquired from three rectangular beams (Aluminum, Brass, and Copper beams), with different properties and geometric specifications, and with different boundary conditions, as shown in the attached figure. The data collection was performed via the integrated smartphone accelerometer with the following specifications:

- The acquisition was performed using a smartphone with a sampling rate of 100Hz.
- The reference name of the smartphone accelerometer is BOSCH BMC150.
- The three beams have been subjected to free vibration by applying a load and removing it.
- The acquisition includes the vibration data in the vertical direction (Z-axis) according to the smartphone coordinate system.

The objective of this study is to extract the dynamic characteristics of the beams and compare them with the theoretical values in order to present an alternative instrument for mechanical and civil engineering students to practice their theoretical courses in structural vibration.

NB: 
- More details are included in the reference below.
- The reported datasets are entirely linked to the scientific article: "Dynamic characteristics of beams under free vibration using the smartphone - laboratory experiments for education",  So, it is recommended to read it.
DOI: 10.17632/mxz9r5wmv9.1
title: Ecosphere (2021) Roberton and Rebar

description: Dataset for "Timing of prescribed burns impacts plant diversity but not investment in pollinator recruitment in a tallgrass prairie" by Roberton and Rebar (2021).
DOI: 10.17632/hwssc4vvhn.1
title: The data for Wu et al. (2021)

description: The data for the Reply to comments by Muñoz-Carpena et al. on "Modeling slope rainfall-infiltration-runoff process with shallow water table during complex rainfall patterns"
DOI: 10.17632/7d63nm2nrm.1
title: IMMUNOMETABOLISM COVID-19

description: We accurately quantified 110 metabolites using targeted metabolomics, and 13 cytokines/chemokines in plasma samples of 121 COVID-19 patients with different levels of severity, and 37 non-COVID-19 individuals. Analyses revealed an integrated host-dependent dysregulation of inflammatory cytokines, neutrophil activation chemokines, glycolysis, mitochondrial metabolism, amino acid metabolism, polyamine synthesis, and lipid metabolism typical of sepsis processes distinctive of a mild disease. Dysregulated metabolites and cytokines/chemokines showed differential correlation patterns in mild and critically ill patients, indicating a crosstalk between metabolism and hyperinflammation.
DOI: 10.17632/hkk2vrbzyh.1
title: Assessment on bio-accumulation of metals in Zea mays (maize) plants grown in a polluted wetland in Harare, Zimbabwe.

description: TITLE :Assessment on bio-accumulation of metals in Zea mays (maize) plants grown in a polluted wetland in Harare, Zimbabwe.
This study investigated bio-accumulation of eight metals; Iron, Zinc, Manganese, Lead, Copper, Cobalt, Cadmium, and Nickel in the soil and in maize grown in a wetland polluted by sewage effluent in Harare, Zimbabwe. Thirty maize plants growing in the wetland were randomly selected and from each plant, the leaf, stem, root and seed were analyzed for presence and levels of the eight metals using the Atomic Absorption Spectrophotometer method. Soil samples were also taken around the rhizosphere of each sample plant and analyzed for levels of the metals. Data were analyzed using One-way Analysis of Variance. Results showed significant differences (p<0.05) in metal levels in the soil and plant samples. The soil had the highest levels of all metals except for Zinc, Cadmium and Lead which were highest in the plant tissues. Bio-accumulation Factor (BAF) for Cadmium and Lead was >1 in all plant tissues. BAF for Zinc was also >1 in the leaf and seed. However, measured amounts for Cadmium and Lead in the seed did not exceed the World Health Organization limits, suggesting that the maize fruit was safe for human consumption, although there was concern of bio-magnification of the metals if pollution in the wetland persisted.

Metal contaminants enter the human body mostly via food and drinking water (Khan, Malik and Mahammad 2013). Metal consumption by humans through food chains has been reported in many countries (Islam, Yang and Mahmood 2007). While some studies have been carried out on bio-accumulation of metals in crops (Khairiah et al. 2002; Ismail, Farihah and Khairiah 2005; Islam, Yang and Mahmood 2007; Zeng, Li and Mei 2008; Khan, Malik and Mahammad 2013; Alia et al. 2015), research on contamination of food crops by metals is scant in Zimbabwe, particularly in polluted wetlands. This study was therefore carried out to generate empirical data that could contribute towards filling of this research gap. The study was carried out in Marlborough Wetland which was polluted by sewage effluent, in Zimbabwe's capital city, Harare. The study investigated bio-accumulation of metals in maize plants cultivated in Marlborough Wetland in order to assess suitability of the cereal crop for human consumption. The main objective of the study was to determine the level of bio-accumulation of eight metals; Iron (Fe), Zinc (Zn), Manganese (Mn), Lead (Pb), Copper (Cu), Cobalt (Co), Cadmium (Cd), and Nickel (Ni) in the soil and in the root, stem, leaf and fruit of maize plants grown in the polluted wetland.
DOI: 10.17632/msrfc7z3yr.2
title: Data for: 3538891

description: This research analyzed the effectiveness of Black Swan strategies for the Short-Term Mean-Reversion systems, the risks and rewards profiles of such betting systems based on the S&P500 index. In determining the Black Swan events, the research made use of multiple strategies against two portfolios. By utilizing the python notebooks, signals created by the Black Swan and Bollinger Bands trading strategies were compared for performance against the baseline index (buy-and-hold strategy). This was followed by a validation of how risk mitigation techniques like the stop-loss affect the trading performance. The research concluded that it is possible to construct a Mean-Reverse strategy that outperforms the market over time.
DOI: 10.17632/hvzky7z99p.1
title: LBM

description: The different asymmetry of rainfall responses during radiative forcing increase and stabilization in RCP4.5 experiments
The climatology state, heat forcing and the model outputs of simulations in LBM
The details of files are shown in the README file.
DOI: 10.17632/sjnv6y4gkz.4
title: WEKA-CoDaPack-iNZight

description: All the figures and excel files for the book
DOI: 10.17632/xv53vjbbd7.1
title: Milk metabolome reveals variations on enteric methane emissions   from dairy cows fed a specific inhibitor of the methanogenesis pathway

description: You will find here, the additional tables and figures of the article: "Milk metabolome reveals variations on enteric methane emissions from dairy cows fed a specific inhibitor of the methanogenesis pathway" by Bénédict Yanibada, Ulli Hohenester, Mélanie Pétéra, Cécile Canlet, Stéphanie Durand, Fabien Jourdan, Anne Ferlay, Diego P. Morgavi, and Hamid Boudra.
The objective of this work is to explore changes in milk metabolic profiles associated with the reduction of methane emissions. In this study we performed, untargeted NMR and LC-MS metabolomics analysis, targeted LC-MS  and GC-FID analysis. We identified 38 discriminant metabolites which affected 10 metabolic pathways including methane metabolism.
DOI: 10.5281/zenodo.5256272
title: Pre-amplification of nucleic acids comparison in the context of sewage metaviromics

description: Raw data from three different pre-amplification nucleic acids pipelines prior to library preparation for metaviromics of sewage samples.
DOI: 10.5281/zenodo.5256271
title: Pre-amplification of nucleic acids comparison in the context of sewage metaviromics

description: Raw data from three different pre-amplification nucleic acids pipelines prior to library preparation for metaviromics of sewage samples.
DOI: 10.6084/m9.figshare.14267495
title: Effects of phenotypic variability on the oxygen and hydrogen isotope compositions of grains in different winter wheat varieties - Primary Data

description: Primary data supporting the publication “Effects of phenotypic variability on the oxygen and hydrogen isotope compositions of grains in different winter wheat varieties” in Isotopes in Environmental and Health Studies.d<sup>18</sup>O and d<sup>2</sup>H values of leaf tissue water and dried grain material of different winter wheat varieties (<i>Triticum aestivum</i> L.) collected from field trials that were set up to test the performance of 36 different winter wheat varieties in the 2017 and 2018 growing seasons across Switzerland. The field trails were organized by the Swiss Institute for Sustainability Sciences (ISS) Agroscope. We obtained dried grain samples from four sites in 2017 and leaf samples for water analysis of three sites in 2018 (See publication Fig. 1, Table 1). The field trials at the different sites were set up in identical layouts, with the exact same 36 winter wheat varieties, each grown on 7 to 10 m<sup>2</sup> plots at each site. The 36 varieties used in the trials differed in the 2017 and 2018 season. Water d<sup>18</sup>O and d<sup>2</sup>H values were measured after Newberry et al. (2017). Bulk dried tissue d<sup>18</sup>O values were analysed after Cueni et al. (in review).
DOI: 10.6084/m9.figshare.14267495.v2
title: Effects of phenotypic variability on the oxygen and hydrogen isotope compositions of grains in different winter wheat varieties - Primary Data

description: Primary data supporting the publication “Effects of phenotypic variability on the oxygen and hydrogen isotope compositions of grains in different winter wheat varieties” in Isotopes in Environmental and Health Studies.d<sup>18</sup>O and d<sup>2</sup>H values of leaf tissue water and dried grain material of different winter wheat varieties (<i>Triticum aestivum</i> L.) collected from field trials that were set up to test the performance of 36 different winter wheat varieties in the 2017 and 2018 growing seasons across Switzerland. The field trails were organized by the Swiss Institute for Sustainability Sciences (ISS) Agroscope. We obtained dried grain samples from four sites in 2017 and leaf samples for water analysis of three sites in 2018 (See publication Fig. 1, Table 1). The field trials at the different sites were set up in identical layouts, with the exact same 36 winter wheat varieties, each grown on 7 to 10 m<sup>2</sup> plots at each site. The 36 varieties used in the trials differed in the 2017 and 2018 season. Water d<sup>18</sup>O and d<sup>2</sup>H values were measured after Newberry et al. (2017). Bulk dried tissue d<sup>18</sup>O values were analysed after Cueni et al. (in review).
DOI: 10.6084/m9.figshare.14267495.v1
title: Effects of phenotypic variability among different varieties on the oxygen and hydrogen isotope composition of grains in winter wheat - Primary Data

description: Primary data supporting the publication “Effects of phenotypic variability among different varieties on the oxygen and hydrogen isotope composition of grains in winter wheat” in Isotopes in Environmental and Health Studies.d<sup>18</sup>O and d<sup>2</sup>H values of leaf tissue water and dried grain material of different winter wheat varieties (<i>Triticum aestivum</i> L.) collected from field trials that were set up to test the performance of 36 different winter wheat varieties in the 2017 and 2018 growing seasons across Switzerland. The field trails were organized by the Swiss Institute for Sustainability Sciences (ISS) Agroscope. We obtained dried grain samples from four sites in 2017 and leaf samples for water analysis of three sites in 2018 (See publication Fig. 1, Table 1). The field trials at the different sites were set up in identical layouts, with the exact same 36 winter wheat varieties, each grown on 7 to 10 m<sup>2</sup> plots at each site. The 36 varieties used in the trials differed in the 2017 and 2018 season. Water d<sup>18</sup>O and d<sup>2</sup>H values were measured after Newberry et al. (2017). Bulk dried tissue d<sup>18</sup>O values were analysed after Cueni et al. (in review).
DOI: 10.3886/e148404
title: Project000001

description: Data for exploring the relationship between trait anxiety and procrastination.
DOI: 10.3886/e148404v1
title: Project000001

description: Data for exploring the relationship between trait anxiety and procrastination.
DOI: 10.6084/m9.figshare.14753442
title: Anonymizedfile.xls

description: The current study aimed to assess the impact of bariatric surgery on employment rates during a 2-year follow-up. Moreover, the differences between employed and unemployed participants in terms of QoL (BAROS) and deprivation (EPICES score) were evaluated.
DOI: 10.6084/m9.figshare.14753442.v1
title: Anonymizedfile.xls

description: The current study aimed to assess the impact of bariatric surgery on employment rates during a 2-year follow-up. Moreover, the differences between employed and unemployed participants in terms of QoL (BAROS) and deprivation (EPICES score) were evaluated.
DOI: 10.6084/m9.figshare.16438671
title: Dataset Hydra of Lerna.xlsx

description: The dataset is made of 248 NUTS2-level units observed in 2014. Source of data are Eurostat, OECD and LUCAS. It is used to analyze the effect of the imbalance in territorial development on perceived well-being.
DOI: 10.15468/dl.m37zrt
title: Occurrence Download

description: A dataset containing 404 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Ozyptila sanctuaria (O.Pickard-Cambridge, 1871)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 404 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093417-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v47mnd
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Harpalus zabroides Dejean, 1829",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 111 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093418-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5sssn
title: Occurrence Download

description: A dataset containing 679 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Dicheirotrichus gustavii Crotch, 1871",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 679 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093419-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7zpzce
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Kolpotocheirodon figueiredoi Malabarba, Lima & Weitzman, 2004)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0093420-240626123714530/datasets/export for details.