cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2fw76s
title: CCDC 2260495: Experimental Crystal Structure Determination

description: Related Article: Xuan Wang, Ji-Jiang Wang, Long Tang, Er-Lin Yue, Chao Bai, Xiao Wang, Yuqi Zhang, Yi-Xia Ren, Xiao-Li Chen|2023|J.Mol.Struct.|1298|137056|doi:10.1016/j.molstruc.2023.137056
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25345/c5cv4c31f
title: MassIVE MSV000093883 - GNPS- HRLCMS of Indigofera longiracemosa leaf methanol extract
title: Hexane, diethyl ether, chloroform, and methanol were used in the serial extraction of Indigofera longiracemosa leaf. The HRLCMS was used to analyse the methanol extract using Q-TOF MS.
DOI: 10.5281/zenodo.10526307
title: Pemodelan Daerah Potensial Pertanian di Indonesia sebagai Usaha Restorasi Ekonomi pada Masa Pandemi COVID-19 menggunakan Metode Hierarchical Clustering
DOI: 10.5281/zenodo.10526308
title: Pemodelan Daerah Potensial Pertanian di Indonesia sebagai Usaha Restorasi Ekonomi pada Masa Pandemi COVID-19 menggunakan Metode Hierarchical Clustering
DOI: 10.6084/m9.figshare.25018154
title: PEER EDITING IN SOUTH KOREAN HIGHER EDUCATION.xlsx

description: Peer editing has many benefits including enhancing critical thinking, improving student writing, and if done properly, it can lead to a more productive learning environment for both students and instructors (Kostopoulout & O’Dwyer, 2021; Lundstrom & Baker, 2009; Storch, 2018; Yao et al., 2021). However, reservations toward this feedback method in a university EFL setting persist due to the accuracy of L2 feedback (Baine, 2003; Erdel, 2023). This study utilized a pretest-posttest writing assessment to analyze differences in writing outcomes in an academic research writing course at two universities in Seoul, South Korea. The sampling consisted of five randomized classes of university undergraduates. Two control groups received feedback via the instructor and two experimental groups received peer-editing feedback. A fifth mixed group was divided between the control and experimental groups but within the same context. The instructors used both in-class feedback and online feedback tools for both the control and experimental groups. The researchers used a MANOVA to compare the pretest and posttest mean average assessment scores between the control and experimental groups. The results indicated that peer-editing feedback was equally effective as professor feedback. Therefore, the results of this study recommend using peer feedback because of the other benefits for L2 learners and because of the benefits it affords instructors.
DOI: 10.6084/m9.figshare.25016918
title: cas3p binding proteins identified by LC-MS/MS analysis

description: DNA affinity chromatography was performed using the cas3 promoter region (−350 to +50) relative to the translation start site (TSS) was amplified by PCR from A. baumannii ATCC 19606T. The PCR product and pSA508 vector were digested with restriction enzymes and ligated using a T4 DNA ligase. The ligated DNA was transformed into E. coli DH5α and cultured for 16 h at 37℃. To pull down the DNA-binding proteins, a biotinylated DNA fragment, including cas3p, was obtained by PCR using a biotinylated forward primer and a non-biotinylated reverse primer listed in Table S1. To prepare the whole proteins, A. baumannii ATCC 19606T was cultured until an OD600 of 0.5, harvested by centrifugation, and resuspended in diethyl pyrocarbonate water. The bacterial solution was sonicated and centrifuged to obtain a clear lysate. Dynabeads™ M-280 Streptavidin (Thermo Fisher Scientific, USA) and a biotinylated probe DNA were mixed and incubated under rolling at room temperature. Dynabeads were pulled down, and the supernatant was discarded to remove the nonspecifically bound proteins after several washing steps. Bound proteins were eluted using different NaCl concentrations (100, 200, 350, 500, and 1000 mM) at each elution. The eluted protein samples were analyzed by 10% Tricine SDS-PAGE gels and were stained with a silver-staining kit (ELPISBIO, Korea). Bands from the SDS-PAGE gel was cut off for LC-MS/MS analysis (Korea Basic Science Institute, KBSI) to identify the proteins according to their size and elution concentration.
DOI: 10.5519/qd.bg2kock8
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2 records)
DOI: 10.6084/m9.figshare.25018195
title: Supplementary Material S4 from Towards a taxonomy of geodiversity

description: Original data of Paistunturit.
DOI: 10.6084/m9.figshare.25018195.v1
title: Supplementary Material S4 from Towards a taxonomy of geodiversity

description: Original data of Paistunturit.
DOI: 10.6084/m9.figshare.25018198
title: Supplementary Material S2 from Towards a taxonomy of geodiversity

description: A provisional taxonomy of topography. Topographical features can be used to supplement or substitute geomorphological geofeatures (see the text and Supplementary Material S1).
DOI: 10.6084/m9.figshare.25018198.v1
title: Supplementary Material S2 from Towards a taxonomy of geodiversity

description: A provisional taxonomy of topography. Topographical features can be used to supplement or substitute geomorphological geofeatures (see the text and Supplementary Material S1).
DOI: 10.6084/m9.figshare.25018204
title: Supplementary Material S5 from Towards a taxonomy of geodiversity

description: Geodiversity is a topical concept in earth and environmental sciences. Geodiversity information is needed to conserve nature, use ecosystem services and achieve sustainable development goals. Despite the increasing demand for geodiversity data, there exists no comprehensive system for categorizing geodiversity. Here, we present a hierarchically structured taxonomy that is potentially applicable in mapping and quantifying geodiversity across different regions, environments and scales. In this taxonomy, the main components of geodiversity are geology, geomorphology, hydrology and paedology. We propose a six-level hierarchical system where the components of geodiversity are classified at progressively lower taxonomic levels based on their genesis, physical–chemical properties and morphology. This comprehensive taxonomy can be used to compile geodiversity information for scientific research and various applications of value to society and nature conservation. Ultimately, this hierarchical system is the first step towards developing a global geodiversity taxonomy.This article is part of the theme issue ‘Geodiversity science for society’.
DOI: 10.6084/m9.figshare.25018204.v1
title: Supplementary Material S5 from Towards a taxonomy of geodiversity

description: Geodiversity is a topical concept in earth and environmental sciences. Geodiversity information is needed to conserve nature, use ecosystem services and achieve sustainable development goals. Despite the increasing demand for geodiversity data, there exists no comprehensive system for categorizing geodiversity. Here, we present a hierarchically structured taxonomy that is potentially applicable in mapping and quantifying geodiversity across different regions, environments and scales. In this taxonomy, the main components of geodiversity are geology, geomorphology, hydrology and paedology. We propose a six-level hierarchical system where the components of geodiversity are classified at progressively lower taxonomic levels based on their genesis, physical–chemical properties and morphology. This comprehensive taxonomy can be used to compile geodiversity information for scientific research and various applications of value to society and nature conservation. Ultimately, this hierarchical system is the first step towards developing a global geodiversity taxonomy.This article is part of the theme issue ‘Geodiversity science for society’.
DOI: 10.6084/m9.figshare.25018207
title: Supplementary Material S4 from Towards a taxonomy of geodiversity

description: Original data of Rokua.
DOI: 10.6084/m9.figshare.25018207.v1
title: Supplementary Material S4 from Towards a taxonomy of geodiversity

description: Original data of Rokua.
DOI: 10.5519/qd.86qvkll9
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (691 records)
DOI: 10.5519/qd.ec00mk0z
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (11 records)
DOI: 10.5519/qd.jopx2p9d
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (48 records)
DOI: 10.6084/m9.figshare.25018190
title: Figureshare TEST.docx

description: Test
DOI: 10.5519/qd.6ps2f6a6
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (8 records)
DOI: 10.5519/qd.hn38pc48
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (24 records)
DOI: 10.5519/qd.akgggu6p
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4 records)
DOI: 10.6084/m9.figshare.24983273
title: Hybrid MERLIN Code from Geometric mechanics of hybrid origami assemblies combining developable and non-developable patterns

description: MATLAB code used to do the numerical simulations in our paper
DOI: 10.6084/m9.figshare.24983273.v2
title: Hybrid MERLIN Code from Geometric mechanics of hybrid origami assemblies combining developable and non-developable patterns

description: MATLAB code used to do the numerical simulations in our paper
DOI: 10.6084/m9.figshare.24983273.v1
title: Hybrid MERLIN Code from Geometric mechanics of hybrid origami assemblies combining developable and non-developable patterns

description: MATLAB code used to do the numerical simulations in our paper
DOI: 10.6084/m9.figshare.24466933
title: Source data for article entitled " Surface photovoltage microscopy for mapping charge separation on photocatalyst particles" submitted to Nature Protocols.

description: Source data for article entitled " Surface photovoltage microscopy for mapping charge separation on photocatalyst particles" submitted to Nature Protocols.
DOI: 10.6084/m9.figshare.24466933.v1
title: Source data for article entitled " Surface photovoltage microscopy for mapping charge separation on photocatalyst particles" submitted to Nature Protocols.

description: Source data for article entitled " Surface photovoltage microscopy for mapping charge separation on photocatalyst particles" submitted to Nature Protocols.
DOI: 10.21335/nmdc-962959866
title: Sediment property data (0-6 cm) from the Nansen Legacy Joint Cruise 2-2, cruise 2021710 (JC2-2)

description: The dataset includes water content, total nitrogen (TN), total carbon (TC), total organic carbon (TOC), total inorganic carbon (TIC), and carbon and nitrogen isotopic signatures (d13C, d15N) in marine sediments. Samples were collected during the Nansen Legacy Joint Cruise 2-2 in August/September in the northern Barents Sea; cruise 2021710 (JC2-2). Short sediment cores were subsampled from three replicate deployments of a giant box corer at stations P7, P8, P9 and P11. At P10, only two deployments were completed. The sediment cores were sliced into 1cm-layers (0 - 6 cm) and immediately stored at -20°C onboard. All samples were freeze-dried in the laboratory of the Department of Geosciences (University of Oslo). Subsequently, approximately 1g of homogenised, freeze-dried sediment from each core interval was ground for total carbon (TC), total organic carbon (TOC), total nitrogen (TN), and their stable carbon (δ13C) and nitrogen (δ15N) isotopic signature measures. Elemental analysis was undertaken with an Elemental Analyser - Isotope Ratio Mass Spectrometry (EA-IRMS; Iso - Analytical Ltd., UK). Prior to TOC and d13C analysis, inorganic carbon was removed from the sediments by acid treatment (1M HCl). The standards δ13CV-PDB (Vienna PeeDee Belemnite) and δ15NAIR (atmospheric N2) were used as references for the carbon and nitrogen isotope values, respectively. TIC content was calculated by subtracting TOC from TC. Grain size distributions, performed on non-acidified samples, were determined using a Beckman Coulter LS 13320 Particle Size Analyser at the Department of Geoscience, University of Tromsø. Organic matter was removed with 10 % H2O2 and deflocculated with a 5 % Calgon solution (sodium hexametaphosphate and sodium carbonate) prior to analysis. Particles within the range of 0.04 – 2000μm were determined. Three replicate measurements were performed per sample, of which the average values are presented in the dataset.
DOI: 10.6084/m9.figshare.25018286
title: Supporting Data - JOA-2023-0255 - Prevalence and Risk Factors Analysis of Early Post-Operative Arrhythmia After Congenital Heart Surgery in Pediatric Patients

description: Our study in Bali,Indonesia reveals 15.2% prevalence of early post-operative arrhythmias following cardiac surgery for congenital heart defects. Notably, Complete Heart Block (CHB) is the most common arrhythmia. Key risk factors identified are Cardiopulmonary Bypass (CPB) duration and potassium levels. These findings shed light on managing post-operative complication.
DOI: 10.6084/m9.figshare.25018286.v1
title: Supporting Data - JOA-2023-0255 - Prevalence and Risk Factors Analysis of Early Post-Operative Arrhythmia After Congenital Heart Surgery in Pediatric Patients

description: Our study in Bali,Indonesia reveals 15.2% prevalence of early post-operative arrhythmias following cardiac surgery for congenital heart defects. Notably, Complete Heart Block (CHB) is the most common arrhythmia. Key risk factors identified are Cardiopulmonary Bypass (CPB) duration and potassium levels. These findings shed light on managing post-operative complication.
DOI: 10.21335/nmdc-1793102323
title: Sediment property data (0-6 cm) from the Nansen Legacy Joint Cruise 3 - Winter gaps cruise 2022702 (JC3)

description: The dataset includes water content, total nitrogen (TN), total carbon (TC), total organic carbon (TOC), total inorganic carbon (TIC), and carbon and nitrogen isotopic signatures (d13C, d15N) in marine sediments. Samples were collected during the Nansen Legacy Joint Cruise 3 - Winter gaps cruise in February in the northern Barents Sea; cruise 2022702 (JC3). Short sediment cores were subsampled from three replicate deployments of a giant box corer at stations P5, P7, slope500 and slope1500. At P1, only two deployments were completed. The sediment cores were sliced into 1cm-layers (0 - 6 cm) and immediately stored at -20°C onboard. All samples were freeze-dried in the laboratory of the Department of Geosciences (University of Oslo). Subsequently, approximately 1g of homogenised, freeze-dried sediment from each core interval was ground for total carbon (TC), total organic carbon (TOC), total nitrogen (TN), and their stable carbon (δ13C) and nitrogen (δ15N) isotopic signature measures. Elemental analysis was undertaken with an Elemental Analyser - Isotope Ratio Mass Spectrometry (EA-IRMS; Iso - Analytical Ltd., UK). Prior to TOC and d13C analysis, inorganic carbon was removed from the sediments by acid treatment (1M HCl). The standards δ13CV-PDB (Vienna PeeDee Belemnite) and δ15NAIR (atmospheric N2) were used as references for the carbon and nitrogen isotope values, respectively. TIC content was calculated by subtracting TOC from TC. Grain size distributions, performed on non-acidified samples, were determined using a Beckman Coulter LS 13320 Particle Size Analyser at the Department of Geoscience, University of Tromsø. Organic matter was removed with 10 % H2O2 and deflocculated with a 5 % Calgon solution (sodium hexametaphosphate and sodium carbonate) prior to analysis. Particles within the range of 0.04 – 2000μm were determined. Three replicate measurements were performed per sample, of which the average values are presented in the dataset. Grain size analysis was not performed for station P1.
DOI: 10.5281/zenodo.10512641
title: Dataset related to article "The outcomes and safety of patients undergoing endoscopic retrograde cholangiopancreatography combining a single-use cholangioscope and a single-use duodenoscope: A multicenter retrospective international study"

description: This record contains raw data related to article “The outcomes and safety of patients undergoing endoscopic retrograde cholangiopancreatography combining a single-use cholangioscope and a single-use duodenoscope: A multicenter retrospective international study”Background: Duodenoscope-related multidrug-resistant organism (MDRO) infections raise concerns. Disposable duodenoscopes have been recently introduced in the market and approved by regulatory agencies with the aim to reduce the risk of endoscopic retrograde cholangiopancreatography (ERCP) associated infections. The aim of this study was to evaluate the outcome of procedures performed with single-use duodenoscopes in patients with clinical indications to single-operator cholangiopancreatoscopy.

Methods: This is a multicenter international, retrospective study combining all patients who underwent complex biliopancreatic interventions using the combination of a single-use duodenoscope and a single-use cholangioscope. The primary outcome was technical success defined as ERCP completion for the intended clinical indication. Secondary outcomes were procedural duration, rate of cross-over to reusable duodenoscope, operator-reported satisfaction score (1 to 10) on performance rating of the single-use duodenoscope, and adverse event (AE) rate.

Results: A total of 66 patients (26, 39.4% female) were included in the study. ERCP was categorized according to ASGE ERCP grading system as 47 (71.2%) grade 3 and 19 (28.8%) grade 4. The technical success rate was 98.5% (65/66). Procedural duration was 64 (interquartile range 15-189) min, cross-over rate to reusable duodenoscope was 1/66 (1.5%). The satisfaction score of the single-use duodenoscope classified by the operators was 8.6 ± 1.3 points. Four patients (6.1%) experienced AEs not directly related to the single-use duodenoscope, namely 2 post-ERCP pancreatitis (PEP), 1 cholangitis and 1 bleeding.

Conclusions: Single-use duodenoscope is effective, reliable and safe even in technically challenging procedures with a non-inferiority to reusable duodenoscope, making these devices a viable alternative to standard reusable equipment.

Keywords: Difficult biliary stones; Endoscopic retrograde cholangiopancreatography; Indeterminate biliary stricture; Single-operator cholangioscopy; Single-use duodenoscope.
DOI: 10.5281/zenodo.10512642
title: Dataset related to article "The outcomes and safety of patients undergoing endoscopic retrograde cholangiopancreatography combining a single-use cholangioscope and a single-use duodenoscope: A multicenter retrospective international study"

description: This record contains raw data related to article “The outcomes and safety of patients undergoing endoscopic retrograde cholangiopancreatography combining a single-use cholangioscope and a single-use duodenoscope: A multicenter retrospective international study”Background: Duodenoscope-related multidrug-resistant organism (MDRO) infections raise concerns. Disposable duodenoscopes have been recently introduced in the market and approved by regulatory agencies with the aim to reduce the risk of endoscopic retrograde cholangiopancreatography (ERCP) associated infections. The aim of this study was to evaluate the outcome of procedures performed with single-use duodenoscopes in patients with clinical indications to single-operator cholangiopancreatoscopy.

Methods: This is a multicenter international, retrospective study combining all patients who underwent complex biliopancreatic interventions using the combination of a single-use duodenoscope and a single-use cholangioscope. The primary outcome was technical success defined as ERCP completion for the intended clinical indication. Secondary outcomes were procedural duration, rate of cross-over to reusable duodenoscope, operator-reported satisfaction score (1 to 10) on performance rating of the single-use duodenoscope, and adverse event (AE) rate.

Results: A total of 66 patients (26, 39.4% female) were included in the study. ERCP was categorized according to ASGE ERCP grading system as 47 (71.2%) grade 3 and 19 (28.8%) grade 4. The technical success rate was 98.5% (65/66). Procedural duration was 64 (interquartile range 15-189) min, cross-over rate to reusable duodenoscope was 1/66 (1.5%). The satisfaction score of the single-use duodenoscope classified by the operators was 8.6 ± 1.3 points. Four patients (6.1%) experienced AEs not directly related to the single-use duodenoscope, namely 2 post-ERCP pancreatitis (PEP), 1 cholangitis and 1 bleeding.

Conclusions: Single-use duodenoscope is effective, reliable and safe even in technically challenging procedures with a non-inferiority to reusable duodenoscope, making these devices a viable alternative to standard reusable equipment.

Keywords: Difficult biliary stones; Endoscopic retrograde cholangiopancreatography; Indeterminate biliary stricture; Single-operator cholangioscopy; Single-use duodenoscope.
DOI: 10.5519/qd.0xfm0qew
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (12 records)
DOI: 10.21227/8m8t-kq30
title: An example of a multimodal lung tumor dataset

description: This is an example of a dataset of multimodal medical images of lung tumors. This dataset has 100 PET/CT,CT,PET images and labels each for lung tumors. The file names of these images are PET/CT,CT,PET, and label. The dataset also has a sample file for the test set. The sample file for the test set is named test.
DOI: 10.5519/qd.tb2vd4o2
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.15151/esrf-es-1444818152
title: High Throughput inhouse samples

description: High Throughput inhouse samples
DOI: 10.15151/esrf-es-1453412990
title: Realign horizontal

description: Primary slits are off by ~200 um, so beam is nearly 1 mm off at EH3. Realign.
DOI: 10.5519/qd.8lem8wnq
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4 records)
DOI: 10.6084/m9.figshare.25018298
title: Rawdata and R code for a field study regarding how nutrient enrichment affects soil diversity-function relationships

description: Rawdata and R code for a field study regarding how nutrient enrichment affects soil diversity-function relationships
DOI: 10.6084/m9.figshare.25018298.v1
title: Rawdata and R code for a field study regarding how nutrient enrichment affects soil diversity-function relationships

description: Rawdata and R code for a field study regarding how nutrient enrichment affects soil diversity-function relationships
DOI: 10.6084/m9.figshare.25018244
title: Supplemental data for "<b>Serum Chemerin levels correlate with the severity of dysglycemia in young adult women with polycystic ovary syndrome</b>"

description: · High serum chemerin levels are seen in dysglycemic PCOS alone, not in all PCOS· Serum Chemerin correlated positively with Body fat (%), not waist girth or BMI· Serum Chemerin correlated positively with HOMA-IR and negatively with HOMA-2β· Chemerin &gt;309.3 ng/ml clearly differentiated PCOS with T2D from those without· A substantial agreement existed between the Chemerin cut off and 2hPGPG&gt;200 mg/dL<br>
DOI: 10.3886/e113031v1-145381
title: Replication data for: Firms, Informality, and Development: Theory and Evidence from Brazil

description: This paper develops and estimates an equilibrium model where heterogeneous firms can exploit two margins of informality: (i) not register their business, the extensive margin; and (ii) hire workers "off the books," the intensive margin. The model encompasses the main competing frameworks for understanding informality and provides a natural setting to infer their empirical relevance. The counterfactual analysis shows that once the intensive margin is accounted for, firm and labor informality need not move in the same direction as a result of policy changes. Lower informality can be, but is not necessarily associated with higher output, TFP, or welfare.