cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/gm0wr-ghd25
title: Bdellovibrio attack-phase

description: In the mixture with Vibrio cholarea MKW1383.Something wrong with the dosage setting.
description: <strong>Tilt Series Date:</strong> 2013-09-10</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Bdellovibrio bacteriovorus</p>
<strong>Strain:</strong> HD100</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Liz Sockett, Cells prepared by Lee Rettberg</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown in S17-1 prey solution at 30 degrees, OD600=0.2, filtered by 0.22 um filter, mixed with overnight Vibrio cholarea MKW1383 for 90 min before freezing</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 nm BSA treated gold. -3 offset, 4 sec blot time, no drain. Ethane/propane mix. Quantifoil Cu Finder grid</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-09-10-21/rawdata/</p>20130909_Janelia_Bdellovibrio_Vibrio_10021.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.6 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        20130909_Janelia_Bdellovibrio_Vibrio_10021_full.rec,  Reconstruction (Pixel Size 1.68 nm), 688.9 MB  
        
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DOI: 10.6084/m9.figshare.30006665
title: Additional file 2 of MS4A6A/Ms4a6d deficiency disrupts neuroprotective microglia functions and promotes inflammation in Alzheimer’s disease model

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30006665.v1
title: Additional file 2 of MS4A6A/Ms4a6d deficiency disrupts neuroprotective microglia functions and promotes inflammation in Alzheimer’s disease model

description: Supplementary Material 2.
DOI: 10.15468/dl.ccd372
title: Occurrence Download

description: A dataset containing 597502 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Tanacetum vulgare"
 ]
}

 The dataset includes 597502 records from 1694 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006037-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hsd2dk
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Catalpa ovata",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000558-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16967712
title: Dataset of Tareq Index (TI) and Classical Topological Indices for Drug-like Molecules

description: This dataset contains the calculated values of the Tareq Index (TI), a novel graph-based descriptor for chemical compounds, alongside classical topological indices such as the first Zagreb index, second Zagreb index, and Randic index. The dataset is designed to support research in cheminformatics, quantitative structure–activity relationships (QSAR), and molecular graph theory. A collection of drug-like molecules was processed using the RDKit library to generate molecular graphs and compute both TI and conventional indices. The dataset offers researchers a new benchmark for comparing the Tareq Index with existing descriptors in predicting physicochemical and biological properties.

 
description: Topological indices (TIs) are numerical graph invariants derived from molecular structure and widely applied in QSAR/QSPR studies, drug discovery, and chemical graph theory [1,2]. Traditional indices such as the Zagreb indices and Randic index have been extensively studied and shown utility in predicting molecular properties [3–5]. Recently, the Tareq Index (TI) was introduced as a novel descriptor tailored to capture structural features of inorganic acids and extended to organic molecules [6].

This dataset provides computed values of TI along with the first Zagreb index, second Zagreb index, and Randic index for a set of drug-like molecules. Molecular structures were represented as SMILES strings, converted into molecular graphs using RDKit, and evaluated for both classical and novel indices. The dataset can be used for:





Benchmarking TI against existing indices in QSAR/QSPR models.




Investigating correlations between TI and molecular properties.




Serving as a training set for machine learning applications in cheminformatics.



Each row of the dataset contains the molecule name (if available), SMILES string, TI value, and classical topological indices.
DOI: 10.5281/zenodo.16967713
title: Dataset of Tareq Index (TI) and Classical Topological Indices for Drug-like Molecules

description: This dataset contains the calculated values of the Tareq Index (TI), a novel graph-based descriptor for chemical compounds, alongside classical topological indices such as the first Zagreb index, second Zagreb index, and Randic index. The dataset is designed to support research in cheminformatics, quantitative structure–activity relationships (QSAR), and molecular graph theory. A collection of drug-like molecules was processed using the RDKit library to generate molecular graphs and compute both TI and conventional indices. The dataset offers researchers a new benchmark for comparing the Tareq Index with existing descriptors in predicting physicochemical and biological properties.

 
description: Topological indices (TIs) are numerical graph invariants derived from molecular structure and widely applied in QSAR/QSPR studies, drug discovery, and chemical graph theory [1,2]. Traditional indices such as the Zagreb indices and Randic index have been extensively studied and shown utility in predicting molecular properties [3–5]. Recently, the Tareq Index (TI) was introduced as a novel descriptor tailored to capture structural features of inorganic acids and extended to organic molecules [6].

This dataset provides computed values of TI along with the first Zagreb index, second Zagreb index, and Randic index for a set of drug-like molecules. Molecular structures were represented as SMILES strings, converted into molecular graphs using RDKit, and evaluated for both classical and novel indices. The dataset can be used for:





Benchmarking TI against existing indices in QSAR/QSPR models.




Investigating correlations between TI and molecular properties.




Serving as a training set for machine learning applications in cheminformatics.



Each row of the dataset contains the molecule name (if available), SMILES string, TI value, and classical topological indices.
DOI: 10.21227/xcy1-r859
title: "Biometric Spoofing Fingerprint Dataset"

description: "Public datasets that include both real and spoofed fingerprints are scarce, obstructing the implementation of secure biometric systems with integrated liveness detection. This dataset aims to address this limitation by providing spoofed fingerprint images. These images were captured during the implementation of the graduation (honours) project \u201cMultimodal Biometric Border Control System\u201d at the Faculty of Computer and Information Sciences, Ain Shams University, Egypt. It was used to support the development of a spoofing detection model. The dataset consists of fingerprint images from a single individual, captured using an R307 optical fingerprint sensor. A total of 202 images were collected, 101 real and 101 fake. Real images are not made public for privacy reasons. Three spoofing materials were used to simulate presentation attacks: clay, glue and tape. This dataset is an extension to the FVC2002 and is intended to support research in spoof detection and enhance the robustness of biometric systems. "
DOI: 10.15468/dl.u6hhdz
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gephyrocharax intermedius)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 25 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000560-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ckep3v
title: Occurrence Download

description: A dataset containing 17880 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "TaxonKey is Nasua narica"
 ]
}

 The dataset includes 17880 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000561-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wskmyh
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lampyridae",
 "Country is Malaysia",
 "MediaType is Image"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000562-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwvhb7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alburnus macedonicus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-6.6 29.26705, -6.6 50.94, 40.81373 50.94, 40.81373 29.26705, -6.6 29.26705))",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Material sample)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000563-250827131500795/datasets/export for details.
DOI: 10.15468/dl.g8bhh9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Suthora alphonsiana",
 "Country is Chinese Taipei",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000564-250827131500795/datasets/export for details.
DOI: 10.15468/dl.s85rr3
title: Occurrence Download

description: A dataset listing the 213 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Lista de árboles y arbustos del Bosque tropical seco del valle alto del río Magdalena, Colombia"
 ]
}

 The dataset's 213 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000536-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29853350
title: Reviewed Literature from "Reimagining Habituation: The Case for a Reciprocal and Contextual Understanding"

description: This dataset includes all final items included in the scoping review for Doney et al. (2025) Reimagining Habituation: The Case for a Reciprocal and Contextual Understanding.
DOI: 10.6084/m9.figshare.29853350.v1
title: Reviewed Literature from "Reimagining Habituation: The Case for a Reciprocal and Contextual Understanding"

description: This dataset includes all final items included in the scoping review for Doney et al. (2025) Reimagining Habituation: The Case for a Reciprocal and Contextual Understanding.
DOI: 10.25574/24286
title: Chandra X-ray Observatory ObsId 24286

description: The superfluid properties of dense neutron star cores
DOI: 10.25574/25361
title: Chandra X-ray Observatory ObsId 25361

description: THE CHANDRA ROUTE TOWARDS DEFINING THE X-RAY PROPERTIES OF THE MOST LUMINOUS QUASARS IN THE UNIVERSE
DOI: 10.15468/dl.s326we
title: Occurrence Download

description: A dataset containing 22963 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Prunella grandiflora"
 ]
}

 The dataset includes 22963 records from 274 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000565-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29027924
title: Additional data for "A close unicellular relative reveals aggregative multicellularity was key to the evolution of animals".

description: Additional data associated with the bioRxiv preprint "A close unicellular relative reveals aggregative multicellularity was key to the evolution of animals" (doi: https://doi.org/10.1101/2025.05.14.654023).<i>Ministeria vibrans</i> functional annotation output files and script for generating an overview of annotations (Mvibrans_functional_annotation.zip), alongside files used for analysis of RNA-sequencing data (Mvibrans_RNA-seq_analyses.zip). Please see the README.pdf file for information about the contents of each zipped folder. RNA-sequencing reads are deposited at the NCBI SRA database under BioProject PRJNA1229532.
DOI: 10.6084/m9.figshare.29027924.v2
title: Additional data for "A close unicellular relative reveals aggregative multicellularity was key to the evolution of animals".

description: Additional data associated with the bioRxiv preprint "A close unicellular relative reveals aggregative multicellularity was key to the evolution of animals" (doi: https://doi.org/10.1101/2025.05.14.654023).<i>Ministeria vibrans</i> functional annotation output files and script for generating an overview of annotations (Mvibrans_functional_annotation.zip), alongside files used for analysis of RNA-sequencing data (Mvibrans_RNA-seq_analyses.zip). Please see the README.pdf file for information about the contents of each zipped folder. RNA-sequencing reads are deposited at the NCBI SRA database under BioProject PRJNA1229532.
DOI: 10.6084/m9.figshare.29027924.v1
title: Additional data for "A close unicellular relative reveals aggregative multicellularity was key to the evolution of animals".

description: Additional data associated with the bioRxiv preprint "A close unicellular relative reveals aggregative multicellularity was key to the evolution of animals" (doi: https://doi.org/10.1101/2025.05.14.654023).<i>Ministeria vibrans</i> functional annotation output files and script for generating an overview of annotations (Mvibrans_functional_annotation.zip), alongside files used for analysis of RNA-sequencing data (Mvibrans_RNA-seq_analyses.zip). Please see the README.pdf file for information about the contents of each zipped folder. RNA-sequencing reads are deposited at the NCBI SRA database under BioProject PRJNA1229532.
DOI: 10.15468/dl.t6zdba
title: Occurrence Download

description: A dataset containing 590 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Catalpa speciosa",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 590 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000567-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2567qc
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Catalpa speciosa",
 "Country is Georgia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000568-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cwc8wz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Catalpa speciosa",
 "Country is Armenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000566-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pmngds
title: Occurrence Download

description: A dataset containing 351 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lampyridae",
 "Country is China",
 "MediaType is Image"
 ]
}

 The dataset includes 351 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000570-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2qky7b
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Metapenaeus stebbingi",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-6.6 29.26705, -6.6 50.94, 40.81373 50.94, 40.81373 29.26705, -6.6 29.26705))",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Material sample)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000569-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wtx5pp
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Peckoltia oligospila)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 25 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000571-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bmwc77
title: Occurrence Download

description: A dataset containing 74210700 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 74210700 records from 4488 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000495-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16965304
title: Data_WP6_3 Policy cost-benefit and cost-effectiveness assessment

description: The dataset contains the final results of the cost-benefit and cost-effectiveness assessments of the policy interventions implemented under WP2. The dataset includes data on both tangible and intangible factors, which are judged to affect the interventions. This encompasses the monetary valuation of health effects and environmental impacts quantified in Task 6.2 (i.e., social or external costs and benefits). In addition, the dataset contains information on the associated costs of the interventions, including both direct and indirect financial costs.

Additionally, the dataset includes the relevant costs associated with the interventions (Financial direct and indirect costs). The dataset also includes the outcomes of the benefit-transfer modelling in relation to policy interventions. Results from the sensitivity analysis are also included.

Data are stored according to the name of the corresponding Urban Living Lab.
DOI: 10.5281/zenodo.16965303
title: Data_WP6_3 Policy cost-benefit and cost-effectiveness assessment

description: The dataset contains the final results of the cost-benefit and cost-effectiveness assessments of the policy interventions implemented under WP2. The dataset includes data on both tangible and intangible factors, which are judged to affect the interventions. This encompasses the monetary valuation of health effects and environmental impacts quantified in Task 6.2 (i.e., social or external costs and benefits). In addition, the dataset contains information on the associated costs of the interventions, including both direct and indirect financial costs.

Additionally, the dataset includes the relevant costs associated with the interventions (Financial direct and indirect costs). The dataset also includes the outcomes of the benefit-transfer modelling in relation to policy interventions. Results from the sensitivity analysis are also included.

Data are stored according to the name of the corresponding Urban Living Lab.
DOI: 10.22002/qf826-98w17
title: JV9082_Janelia42k

description: DotF-sfGFP fusion
description: <strong>Tilt Series Date:</strong> 2018-08-29</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Joseph P. Vogel, Washington University School of Medicine. Data collected and processed by Debnath Ghosal. Janelia Krios.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in AYE liquid culture with following supplements: ferric nitrate, cysteine hydrochloride and thymidine.</p>
<strong>Sample Preparation:</strong> 6 grids were frozen for the JV9082 strain (2x concentrated culture); Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 4.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-29-63/rawdata/</p>JV9082_201808290077.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.1 GB  
        
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        JV9082_201808290077_full.rec,  Reconstruction (Pixel Size 1.04 nm), 445.4 MB  
        
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        > <i class="download icon"></i> Download </a></p>