cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7961537
title: Additional file 5: of The effects of yoga compared to active and inactive controls on physical function and health related quality of life in older adults- systematic review and meta-analysis of randomised controlled trials

description: (i) Data for meta-analysis- yoga compared with inactive controls for physical function outcomes. (ii) Data for meta-analysis- yoga compared with active controls for physical function outcomes. (iii) Data for meta-analysis- yoga compared with inactive controls for HRQoL outcomes. (iv) Data for meta-analysis- yoga compared with active controls for HRQoL outcomes. This excel file has four tabs which contain the data used in the main meta-analyses analyses (physical function and HRQoL outcomes for yoga vs inactive controls and yoga vs active controls) presented in this review. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.7961558
title: Additional file 8: of The effects of yoga compared to active and inactive controls on physical function and health related quality of life in older adults- systematic review and meta-analysis of randomised controlled trials

description: (i)Â Risk of bias details for physical function outcomes. (ii)Â Risk of bias details for HRQoL outcomes. This excel file has two tabs with the risk of bias details for physical function and HRQoL outcomes. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.7961564
title: Additional file 9: of The effects of yoga compared to active and inactive controls on physical function and health related quality of life in older adults- systematic review and meta-analysis of randomised controlled trials

description: This table consists of the tests/instrument used to measure each outcome for all studies included in the meta-analysis (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7961789
title: Additional file 2 of GNE: a deep learning framework for gene network inference by aggregating biological information

description: Table S2. Includes E. coli gene pairs predicted by GNE with probabilities of 0.5 or higher. Rows marked with yellow color indicate predicted interaction is true based on latest version 3.4.162 of BioGRID interaction dataset released on June 2018. (XLSX 43.7 kb)
DOI: 10.6084/m9.figshare.7961789.v1
title: Additional file 2 of GNE: a deep learning framework for gene network inference by aggregating biological information

description: Table S2. Includes E. coli gene pairs predicted by GNE with probabilities of 0.5 or higher. Rows marked with yellow color indicate predicted interaction is true based on latest version 3.4.162 of BioGRID interaction dataset released on June 2018. (XLSX 43.7 kb)
DOI: 10.6084/m9.figshare.7961660
title: Additional file 1: of FCMDAP: using miRNA family and cluster information to improve the prediction accuracy of disease related miRNAs

description: Known miRNA-disease associations. (XLSX 146 kb)
DOI: 10.6084/m9.figshare.22637935
title: Additional file 2 of Functional gene-guided enrichment plus in situ microsphere cultivation enables isolation of new crucial ureolytic bacteria from the rumen of cattle

description: Additional file 2: Supplementary Table 2. All ruminal ureolytic bacteria that have been reported in the literature.
DOI: 10.6084/m9.figshare.22637938
title: Additional file 3 of Functional gene-guided enrichment plus in situ microsphere cultivation enables isolation of new crucial ureolytic bacteria from the rumen of cattle

description: Additional file 3: Supplementary Table 3. The major GH families identified in each isolate.
DOI: 10.6084/m9.figshare.7961666
title: Additional file 2: of FCMDAP: using miRNA family and cluster information to improve the prediction accuracy of disease related miRNAs

description: Integrated disease similarity. (XLSX 1379 kb)
DOI: 10.6084/m9.figshare.22637938.v1
title: Additional file 3 of Functional gene-guided enrichment plus in situ microsphere cultivation enables isolation of new crucial ureolytic bacteria from the rumen of cattle

description: Additional file 3: Supplementary Table 3. The major GH families identified in each isolate.
DOI: 10.6084/m9.figshare.13204538.v1
title: Additional file 2 of Per-fraction positional and dosimetric performance of prone breast tangential radiotherapy on Halcyon™ linear accelerator assessed with daily rapid kilo-voltage cone beam computed tomography: a single-institution pilot study

description: Additional file 2: Parallel slopes model: effect of clinically relevant predictors on dose-volume metrics deviation from planned, estimation of per-patient intercepts and overall regression coefficient.
DOI: 10.6084/m9.figshare.12680226
title: Additional file 1 of Diet induced the change of mtDNA copy number and metabolism in Angus cattle

description: Additional file 1: Table S1. Feed components analysis. Table S2. The 1283 mitochondria-related genes. Table S3. Differentially expressed mitochondria-related gene in the four tissues. Table S4. The differentially expressed genes in muscle of grass-fed and grain-fed Angus cattle. Table S5. The differentially expressed genes in liver of grass-fed and grain-fed Angus cattle. Table S6. The differentially expressed genes in rumen of grass-fed and grain-fed Angus cattle. Table S7. The differentially expressed genes in spleen of grass-fed and grain-fed Angus cattle. Table S8. Gene ontology terms in the four tissues.
DOI: 10.6084/m9.figshare.12680466
title: Additional file 1 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 1. Summary of the methylation ratio in different sequence contexts (CG, CHG, and CHH) in developmental stems of Populus trichocarpa.
DOI: 10.6084/m9.figshare.20020638.v1
title: Microwave Absorbing Properties of NiFe2O4 Nanosheets Synthesized Via a Simple Surfactant-Assisted Solution Route

description: NiFe2O4 nanosheets have been synthesized via a simple surfactant-assisted solution route, which are confirmed by X-ray powder diffraction, scanning electron microscopy and transmission electron microscopy. The NiFe2O4 sample exhibits the sheet-like structure, with width varying from 200 to 800 nm and thickness ranging from 20 to 60 nm. The electromagnetic properties of NiFe2O4 nanosheets-paraffin composites have been deeply investigated. The multiple dielectric relaxation loss in NiFe2O4 nanosheets is attributed to the size distribution and morphology of the NiFe2O4 nanosheets. The magnetic loss in the present system is caused mainly by the natural resonance. An absorber with a thickness of 4.3 mm exhibits an optimal reflection loss (RL) value of -47.1 dB at 7.67 GHz. RL values exceeding -20 dB in the 2.68-17.96 GHz range are obtained by choosing an appropriate absorption-layer thickness between 1.9 and 10 mm. Not only the RL peak frequency but also the number of the peaks can be well explained by the quarter-wavelength cancellation model.
DOI: 10.6084/m9.figshare.7961672.v1
title: Additional file 3: of FCMDAP: using miRNA family and cluster information to improve the prediction accuracy of disease related miRNAs

description: Integrated miRNA similarity. (XLSX 1850 kb)
DOI: 10.6084/m9.figshare.12680226.v1
title: Additional file 1 of Diet induced the change of mtDNA copy number and metabolism in Angus cattle

description: Additional file 1: Table S1. Feed components analysis. Table S2. The 1283 mitochondria-related genes. Table S3. Differentially expressed mitochondria-related gene in the four tissues. Table S4. The differentially expressed genes in muscle of grass-fed and grain-fed Angus cattle. Table S5. The differentially expressed genes in liver of grass-fed and grain-fed Angus cattle. Table S6. The differentially expressed genes in rumen of grass-fed and grain-fed Angus cattle. Table S7. The differentially expressed genes in spleen of grass-fed and grain-fed Angus cattle. Table S8. Gene ontology terms in the four tissues.
DOI: 10.6084/m9.figshare.12680484.v1
title: Additional file 7 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 7. Relative percentages of 5-mCs in three sequence contexts (CG, CHG, and CHH) in various transposable elements (TEs) of Populus trichocarpa stems.
DOI: 10.6084/m9.figshare.13204439.v1
title: Additional file 1 of Evaluation of 24 protocols for the production of platelet-rich fibrin

description: Additional file 1. Variability of cell layer separation following the same protocol in 3 different individuals. One interesting observation in the present study was the variability observed among various donors when centrifugation took place at identical protocols. Note the difference in cell layer separation among 3 patients centrifuged at 700g for 5 min. While in donor one, the plasma layer separation occurred in layer 3 (Figure S1), donor 3 demonstrated separation in layer 5 (Figure S2) and demonstrated a greater than 50% increase in the total amount of plasma following identical protocols. The majority of donor samples tended to show separation at layer 4, as depicted in Figure S3. (Arrows represent the separation between the plasma and red blood cell layer (buffy coat)).
DOI: 10.6084/m9.figshare.7961660.v1
title: Additional file 1: of FCMDAP: using miRNA family and cluster information to improve the prediction accuracy of disease related miRNAs

description: Known miRNA-disease associations. (XLSX 146 kb)
DOI: 10.6084/m9.figshare.7961714
title: Additional file 2 of Anti-TNF- Îątreatment-related pathways and biomarkers revealed by transcriptome analysis in Chinese psoriasis patients

description: Additional Table 2. The details of co-expression modules generated from WGCNA, where 13 modules that are significantly positive-correlated with treatment (correlation coefficient &gt; 0.5, p-value &lt; 0.05); and 9 modules that are significantly negative-correlated with treatment (correlation coefficient &lt; -0.5, p-value &lt; 0.05). (XLSX 375 kb)
DOI: 10.6084/m9.figshare.7961699
title: Additional file 3: of Long non-coding RNA GBCDRlnc1 induces chemoresistance of gallbladder cancer cells by activating autophagy

description: Table S2. 457 upregulated lncRNAs in NOZ/Dox with Fold Change &gt; 2.0.Â (XLSX 45 kb)
DOI: 10.6084/m9.figshare.7961714.v1
title: Additional file 2 of Anti-TNF- Îątreatment-related pathways and biomarkers revealed by transcriptome analysis in Chinese psoriasis patients

description: Additional Table 2. The details of co-expression modules generated from WGCNA, where 13 modules that are significantly positive-correlated with treatment (correlation coefficient &gt; 0.5, p-value &lt; 0.05); and 9 modules that are significantly negative-correlated with treatment (correlation coefficient &lt; -0.5, p-value &lt; 0.05). (XLSX 375 kb)
DOI: 10.6084/m9.figshare.13204535
title: Additional file 1 of Per-fraction positional and dosimetric performance of prone breast tangential radiotherapy on Halcyon™ linear accelerator assessed with daily rapid kilo-voltage cone beam computed tomography: a single-institution pilot study

description: Additional file 1: Parallel slopes model: effect of clinically relevant predictors on dose-volume metrics deviation from planned, effect size per unit.
DOI: 10.6084/m9.figshare.7961666.v1
title: Additional file 2: of FCMDAP: using miRNA family and cluster information to improve the prediction accuracy of disease related miRNAs

description: Integrated disease similarity. (XLSX 1379 kb)
DOI: 10.6084/m9.figshare.7961672
title: Additional file 3: of FCMDAP: using miRNA family and cluster information to improve the prediction accuracy of disease related miRNAs

description: Integrated miRNA similarity. (XLSX 1850 kb)
DOI: 10.6084/m9.figshare.7961702.v1
title: Additional file 4: of Long non-coding RNA GBCDRlnc1 induces chemoresistance of gallbladder cancer cells by activating autophagy

description: Table S3. 266 downregulated lncRNAs in NOZ/Dox with Fold Change &gt; 2.0.Â (XLSX 29 kb)
DOI: 10.6084/m9.figshare.20020665
title: The Analysis of the Microstructure and Mechanical Properties of Low Carbon Microalloyed Steels after Ultra Fast Cooling

description: In this paper, two low carbon microalloyed steels, named as steel A and steel B, were fabricated by ultra fast cooling (UFC). In both steels, the microstructures containing quasi polygonal ferrite (QF), acicular ferrite (AF) and granular bainite (GB) can be obtained by UFC process. The amount of AF in steel B is more than that in steel A. The size and distribution of precipitates (Nb/Ti carbonitrides) in steel B are finer and more dispersed than those of in steel A due to relatively low finish cooling temperature. The mechanical properties of both steels are effectively enhanced by UFC process. UFC process produces low-temperature transformation microstructures containing a significant amount of AF. The mechanical properties of steel B were more satisfactory than those of steel A due to the finer average grain size, the greater amount of the volume fractions and smaller size of secondary phases.
DOI: 10.6084/m9.figshare.7961708.v1
title: Additional file 1 of Anti-TNF- Îątreatment-related pathways and biomarkers revealed by transcriptome analysis in Chinese psoriasis patients

description: Additional Table 1. 176 differential expressed genes (DEGs) between baseline and 12-week after treatment with adjusted p-value &lt;0.05 and 1.55-Fold Change by using paired t-test. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.20020671
title: Microstructure Evolution of the Mg-5.8 Zn-0.5 Zr-1.0 Yb Alloy During Homogenization

description: The influence of homogenization treatment on microstructure evolution of Mg-5.8Zn-0.5Zr-1.0Yb (mass fraction, %) alloy was investigated under different annealing temperatures and holding times. Results indicated a severe dendritic segregation in the as-cast ingot. Zn and Yb segregate remarkably at the grain boundary and Zr appears in the form of precipitates. The Mg-Zn binary eutectic phases and a new ternary phase Mg-Zn-Yb are mainly distributed at dendrite boundaries. After homogenization, most of the eutectic phases dissolve into the matrix, except for a small amount of Mg-Zn-Yb phase. The area fractions of residual secondary phase decrease from 5.54% in the as-cast alloy to 0.59% in the well-homogenized sample. Microhardness test indicates that with the increasing temperature and holding time, microhardness value decreased sharply within the first stage of homogenization and then increased steadily to the local maximum value at 380 ºC and 12 h, followed by a slight reduction. Basing on the comprehensive analysis on microstructure and mechanical properties, the homogenization treatment at 380 ºC for 12 h is preferable.
DOI: 10.6084/m9.figshare.20020749
title: Co3O4-ZnO P-N Heterostructure Nanomaterials Film and its Enhanced Photoelectric Response to Visible Lights at Near Room Temperature

description: In this paper, Co3O4-ZnO nanomaterials with Co3O4 doping mass fractions of 0%, 2.13%, 4.13%, and 6.13% were prepared by sol-gel method. In order to explain and confirm the influence of the incorporation of Co3O4 on the surface morphology and gas sensitivity of ZnO at a relatively low gas concentration, additional studies such as XRD, XPS, SEM, EDS and UV-vis spectroscopy were performed. And its photoelectric response to 100 ppm acetone at near room temperature and visible light irradiation was studied. Due to the formation of P-N heterojunctions, the Co3O4-ZnO heterostructural nanoparticles has a highe response to low concentrations of acetone gas than undoped ZnO nanoparticles even at operating temperatures as low as 30ºC. The addition of Co3O4 improves the sensitivity and selectivity of ZnO thick films. The sensitivity of the 4.13wt% Co3O4-ZnO sample to 100 ppm acetone at a working temperature of 30ºC was 24.36. The light excitation effect was significantly enhanced. Under visible light irradiation, the sensitivity can reach 37.21. In addition, the Co3O4-ZnO P-N heterojunction model was combined with visible light excitation theory to further explore the mechanism of gas sensing reaction.
DOI: 10.6084/m9.figshare.7961729.v1
title: Additional file 8: of Long non-coding RNA GBCDRlnc1 induces chemoresistance of gallbladder cancer cells by activating autophagy

description: Table S4. List of possible GBCDRlnc1-sence andÂ GBCDRlnc1-antisence interacting proteins identified by mass spectrometry.Â (XLSX 34 kb)
DOI: 10.6084/m9.figshare.13204562
title: Additional file 1 of HLA-A and HLA-DRB1 may play a unique role in ovarian teratoma-associated anti-N-methyl-D-aspartate receptor encephalitis

description: Additional file 1: Supplementary Table S1. The differentially expressed proteins in iTRAQ.
DOI: 10.6084/m9.figshare.7961729
title: Additional file 8: of Long non-coding RNA GBCDRlnc1 induces chemoresistance of gallbladder cancer cells by activating autophagy

description: Table S4. List of possible GBCDRlnc1-sence andÂ GBCDRlnc1-antisence interacting proteins identified by mass spectrometry.Â (XLSX 34 kb)
DOI: 10.6084/m9.figshare.12156387
title: ESM tables from Cuticular reticulation replicates the pattern of epidermal cells in lowermost Cambrian scalidophoran worms

description: Data of reticulation shape, size of extant and fossil ecdysozoans.
DOI: 10.6084/m9.figshare.7961702
title: Additional file 4: of Long non-coding RNA GBCDRlnc1 induces chemoresistance of gallbladder cancer cells by activating autophagy

description: Table S3. 266 downregulated lncRNAs in NOZ/Dox with Fold Change &gt; 2.0.Â (XLSX 29 kb)
DOI: 10.6084/m9.figshare.12680463
title: Additional file 17 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 17. Homologs of DNA methyltransferase and demethylase proteins in poplar.
DOI: 10.6084/m9.figshare.12680463.v1
title: Additional file 17 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 17. Homologs of DNA methyltransferase and demethylase proteins in poplar.
DOI: 10.6084/m9.figshare.13204592.v1
title: Additional file 2 of Prediction and prioritization of autism-associated long non-coding RNAs using gene expression and sequence features

description: Additional file 2. The average importance score calculated by the random forest model for each of the 320 k-mer features.
DOI: 10.6084/m9.figshare.13204595
title: Additional file 3 of Prediction and prioritization of autism-associated long non-coding RNAs using gene expression and sequence features

description: Additional file 3. ASD-associated candidate lncRNAs overlapping with the genomic loci of the known ASD risk genes.
DOI: 10.6084/m9.figshare.12680478
title: Additional file 5 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 5. Relative proportions of mCs in three sequence contexts (CG, CHG and CHH) in Populus trichocarpa stems.
DOI: 10.6084/m9.figshare.13204595.v1
title: Additional file 3 of Prediction and prioritization of autism-associated long non-coding RNAs using gene expression and sequence features

description: Additional file 3. ASD-associated candidate lncRNAs overlapping with the genomic loci of the known ASD risk genes.
DOI: 10.5281/zenodo.10636454
title: melanotaenia_eachamensis_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.10636455
title: melanotaenia_eachamensis_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.6084/m9.figshare.12680484
title: Additional file 7 of DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems

description: Additional file 7. Relative percentages of 5-mCs in three sequence contexts (CG, CHG, and CHH) in various transposable elements (TEs) of Populus trichocarpa stems.
DOI: 10.6084/m9.figshare.22638028
title: Additional file 1 of Prognostic predictors of radical resection of stage I-IIIB non-small cell lung cancer: the role of preoperative CT texture features, conventional imaging features, and clinical features in a retrospectively analyzed

description: Additional file 1.
DOI: 10.6084/m9.figshare.20020737
title: Enhanced Photocatalytic Degradation Activity of BiFeO3 Microspheres by Decoration with g-C3N4 Nanoparticles

description: In this work, the g-C3N4 nanoparticles decorated BiFeO3 microspheres composites (g-C3N4/BiFeO3) were successfully synthesized by hydrothermal treatment of g-C3N4 nanoparticles together with BiFeO3 microspheres. The SEM and HRTEM observation indicate that the C3N4 nanoparticles with size of 30-50 nm are well decorated on the surface of BiFeO3 microspheres. The photocatalytic activities of the samples are investigated by the degradation of methylene blue (MB) under the irradiation of simulated sunlight. The as-prepared g-C3N4/BiFeO3 composites exhibit remarkable enhanced photocatalytic activity compared with bare BiFeO3. More importantly, the photocataltic performance of the composites is further confirmed by the degradation of colorless phenol. Furthermore, the favorable catalytic stability of composites is demonstrated through the recycling photocatalytic experiment. The enhanced photocatalytic activity of g-C3N4/BiFeO3 composites is mainly attributed to the separation of the photogenerated electron-hole pairs, resulting from the migration of the photoinduced charge between g-C3N4 nanoparticles and BiFeO3. A possible photocatalytic mechanism for dye degradation over g-C3N4/BiFeO3 composite is proposed based on the active species trapping experiment, revealing that the photogenerated hole (h+) and hydrogen peroxide (H2O2) are regarded as the major active species for the decomposition of dye, while hydroxyl radicals (•OH) plays a minor role in the photocatalytic reaction.
DOI: 10.6084/m9.figshare.20020737.v1
title: Enhanced Photocatalytic Degradation Activity of BiFeO3 Microspheres by Decoration with g-C3N4 Nanoparticles

description: In this work, the g-C3N4 nanoparticles decorated BiFeO3 microspheres composites (g-C3N4/BiFeO3) were successfully synthesized by hydrothermal treatment of g-C3N4 nanoparticles together with BiFeO3 microspheres. The SEM and HRTEM observation indicate that the C3N4 nanoparticles with size of 30-50 nm are well decorated on the surface of BiFeO3 microspheres. The photocatalytic activities of the samples are investigated by the degradation of methylene blue (MB) under the irradiation of simulated sunlight. The as-prepared g-C3N4/BiFeO3 composites exhibit remarkable enhanced photocatalytic activity compared with bare BiFeO3. More importantly, the photocataltic performance of the composites is further confirmed by the degradation of colorless phenol. Furthermore, the favorable catalytic stability of composites is demonstrated through the recycling photocatalytic experiment. The enhanced photocatalytic activity of g-C3N4/BiFeO3 composites is mainly attributed to the separation of the photogenerated electron-hole pairs, resulting from the migration of the photoinduced charge between g-C3N4 nanoparticles and BiFeO3. A possible photocatalytic mechanism for dye degradation over g-C3N4/BiFeO3 composite is proposed based on the active species trapping experiment, revealing that the photogenerated hole (h+) and hydrogen peroxide (H2O2) are regarded as the major active species for the decomposition of dye, while hydroxyl radicals (•OH) plays a minor role in the photocatalytic reaction.
DOI: 10.5281/zenodo.10636474
title: melanotaenia_goldiei_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.10636475
title: melanotaenia_goldiei_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.6084/m9.figshare.12680401.v1
title: Additional file 1 of Correlation between percutaneous transthoracic needle biopsy and recurrence in stage I lung cancer: a systematic review and meta-analysis

description: Additional file 1.