cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.nurjdc
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039179-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e7xn8e
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alcathoe autumnalis Engelhardt, 1946"
 ]
}

 The dataset includes 30 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0239137-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j98j2j
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is 575c52b0-a742-11db-a6ff-b8a03c50a862",
 "TaxonKey is Congolapia crassa (Pellegrin, 1903)"
 ]
}

 The dataset includes 15 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039006-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.myg5fi
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039188-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qj68ye
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alcathoe pepsioides Engelhardt, 1925"
 ]
}

 The dataset includes 29 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0239146-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jyyo9b
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039363-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0nrrps
title: Occurrence Download

description: A dataset containing 981435927 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 981435927 records from 19477 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001493-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/j1c-zke-r3s
title: Cupuladria Canu & Bassler, 1919

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q6w-d7g-ypn
title: †Pseudorbitoides trechmanni Douvillé, 1922

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/89l-prv-vrb
title: Lesueurigobius

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9z4-zsm-qd7
title: Megabalanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.wg45xt
title: Occurrence Download

description: A dataset containing 127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haliclona caerulea",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 127 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020208-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/9jx-k4h-6yd
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hed-dfz-avj
title: Gymnammodytes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pzw-e5n-ckf
title: Tyto Billberg, 1828

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m2r-fn2-ws6
title: Tyto Billberg, 1828

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q00-r9b-25g
title: Ptychophylloceras

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2ca-raw-lqv
title: Eucytherura (Eucytherura) Müller, 1894

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3p7-7yk-xyz
title: Cytherella (Cytherella) Jones, 1849

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9ec-ezj-2as
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2yc-gyz-w5j
title: Cerithium Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6v1-64b-tl6
title: Cythere (Cythere) Müller, 1785

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/182-yry-4nl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7x7-kcv-l99
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xgg-5w0-ymr
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qv4-jl2-3rj
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wqk-hpn-1wl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4e8-nbh-4c7
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h86-bsn-vlj
title: †Pseudorbitoides trechmanni Douvillé, 1922

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m8h-26p-yyk
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m9l-add-d8w
title: Adeonellopsis MacGillivray, 1886

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ajt-p3w-gzp
title: Flabellum (Flabellum) pavoninum Lesson, 1831

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q3l-t97-zch
title: †Pseudorbitoides trechmanni Douvillé, 1922

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vrb-tgy-jfb
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.rpc4y4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asparagus setaceus",
 "Country is Samoa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020209-250811113504898/datasets/export for details.
DOI: 10.3535/6pp-s01-cfg
title: Paralabrax

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kq8-1g2-ap8
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4np-6vx-2gk
title: Odontaspis

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ngf-x1a-9ct
title: Balaenoptera acutorostrata Lacépède, 1804

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5v0-b2l-mm0
title: Aves

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z0c-9tj-h19
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7zw-e3c-9gy
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8zz-rga-1gg
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y6q-svt-x87
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hd7-qfl-3y6
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rp8-7yf-6gz
title: Cytherura Sars, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g1s-qn4-zrv
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yrs-ca4-3lz
title: Bos taurus primigenius Bojanus, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17632/vcs9t6gx6w
title: A Scoping Review of Trauma-Informed Care in Dermatology: Medical Education and Clinical Practice Supplementary References

description: Supplementary References i-xviii
DOI: 10.3535/2xx-6hx-ksq
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1qg-z04-6fv
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6gt-r4k-bvq
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17632/vcs9t6gx6w.1
title: A Scoping Review of Trauma-Informed Care in Dermatology: Medical Education and Clinical Practice Supplementary References

description: Supplementary References i-xviii
DOI: 10.3535/f1n-558-6n3
title: †Caryophyllia (Acanthocyathus) spinosa (Umbgrove, 1950)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zaj-cbr-amg
title: Crioceratites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bgc-s90-klw
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.8235473
title: Phmamm-7 (previously published as Astec-Pm7; Wild type <i>Phallusia mammillata</i> embryo, live SPIM imaging, stages 7-12)

description: <b>Phmamm-7 (</b><b>previously published as Astec-Pm7</b><b>)</b><br><b>Organism: </b><i>Phallusia mammillata</i> (Phlebobranch ascidian)<br><b>Description:</b><br>This dataset contains live imaging data of embryonic development in <i>Phallusia mammillata</i>. The cell membranes were fluorescently labeled by microinjection of mRNA encoding PH-citrine into an unfertilized egg.<br><b>Imaging conditions:</b><br>The embryo was imaged with a MuVi-SPIM light-sheet microscope for ~2.5 hours, from the 44-cell stage (Tp4, St. 7) up to the mid gastrula stage (Tp82, St. 12). Acquisitions were performed every 2 minutes at 18 °C in artificial seawater (ASW, salinity: 38 ppt).<br><b>Temporal alignment:</b>Embryonic development in <i>Phallusia mammillata</i> shows natural variability in timing between individuals. To enable direct comparison across datasets, developmental time was normalized based on cell number. <b>Phmamm-8 was chosen as the reference embryo</b>, and Phmamm-7 was temporally aligned to it. In the normalized timeline, the acquisition of Phmamm-7 corresponds to a starting point (t0) of approximately <b>221 minutes post fertilization (tpf)</b>, with an effective acquisition interval of <b>1.66 minutes</b>. This temporal alignment was performed using the <b>ASCIDIAN package</b> (see documentation for details). This allows stage-by-stage comparison of Phmamm-7 with Phmamm-8 and the other ascidian embryo datasets.<br><br><b>Data processing:</b><br>Fusion of images from four angles, whole-cell segmentation and temporal registration to correct for embryo movement were performed using the ASTEC pipeline (detailed documentation available here).In version 2: cell identification and fate assignments were further refined using the ASCIDIAN package (documentation available here).<b>Dataset versions:</b>Guignard et al, 2020:The four angle fusion images obtained using the ASTEC pipeline are shared in .inr format (fuse.tar.gz archive file).Whole cells were segmented using the ASTEC pipeline and shared in .inr format (post.tar.gz archive file).Surface meshes (.obj) povided in the mesh.tar.gz archive were produced using the VTK library and MeshLab.Individual cell geometric properties are shared in two different formats, .xml and .pkl (properties.tar.gz archive file).Biasuz et al, 2025 (v2):The four angle fusion images obtained using the ASTEC pipeline and temporally registered to compensate for embryo movements in the microscope are shared in .nii format (Astec-Phmamm7-v2_fuse.tar.gz archive file).Whole cells were segmented using the ASTEC pipeline and temporally registered to compensate for embryo movements in the microscope are shared in .nii format (Astec-Phmamm7-v2_post.tar.gz archive file).Individual cell geometric and naming properties are shared in .xml format (Astec-Phmamm7-v2_properties.tar.gz archive file).For additional details about the .nii format, please refer to this resource.<br>
DOI: 10.6084/m9.figshare.8235473.v2
title: Phmamm-7 (previously published as Astec-Pm7; Wild type <i>Phallusia mammillata</i> embryo, live SPIM imaging, stages 7-12)

description: <b>Phmamm-7 (</b><b>previously published as Astec-Pm7</b><b>)</b><br><b>Organism: </b><i>Phallusia mammillata</i> (Phlebobranch ascidian)<br><b>Description:</b><br>This dataset contains live imaging data of embryonic development in <i>Phallusia mammillata</i>. The cell membranes were fluorescently labeled by microinjection of mRNA encoding PH-citrine into an unfertilized egg.<br><b>Imaging conditions:</b><br>The embryo was imaged with a MuVi-SPIM light-sheet microscope for ~2.5 hours, from the 44-cell stage (Tp4, St. 7) up to the mid gastrula stage (Tp82, St. 12). Acquisitions were performed every 2 minutes at 18 °C in artificial seawater (ASW, salinity: 38 ppt).<br><b>Temporal alignment:</b>Embryonic development in <i>Phallusia mammillata</i> shows natural variability in timing between individuals. To enable direct comparison across datasets, developmental time was normalized based on cell number. <b>Phmamm-8 was chosen as the reference embryo</b>, and Phmamm-7 was temporally aligned to it. In the normalized timeline, the acquisition of Phmamm-7 corresponds to a starting point (t0) of approximately <b>221 minutes post fertilization (tpf)</b>, with an effective acquisition interval of <b>1.66 minutes</b>. This temporal alignment was performed using the <b>ASCIDIAN package</b> (see documentation for details). This allows stage-by-stage comparison of Phmamm-7 with Phmamm-8 and the other ascidian embryo datasets.<br><br><b>Data processing:</b><br>Fusion of images from four angles, whole-cell segmentation and temporal registration to correct for embryo movement were performed using the ASTEC pipeline (detailed documentation available here).In version 2: cell identification and fate assignments were further refined using the ASCIDIAN package (documentation available here).<b>Dataset versions:</b>Guignard et al, 2020:The four angle fusion images obtained using the ASTEC pipeline are shared in .inr format (fuse.tar.gz archive file).Whole cells were segmented using the ASTEC pipeline and shared in .inr format (post.tar.gz archive file).Surface meshes (.obj) povided in the mesh.tar.gz archive were produced using the VTK library and MeshLab.Individual cell geometric properties are shared in two different formats, .xml and .pkl (properties.tar.gz archive file).Biasuz et al, 2025 (v2):The four angle fusion images obtained using the ASTEC pipeline and temporally registered to compensate for embryo movements in the microscope are shared in .nii format (Astec-Phmamm7-v2_fuse.tar.gz archive file).Whole cells were segmented using the ASTEC pipeline and temporally registered to compensate for embryo movements in the microscope are shared in .nii format (Astec-Phmamm7-v2_post.tar.gz archive file).Individual cell geometric and naming properties are shared in .xml format (Astec-Phmamm7-v2_properties.tar.gz archive file).For additional details about the .nii format, please refer to this resource.<br>
DOI: 10.15468/dl.gassgq
title: Occurrence Download

description: A dataset containing 2070 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Larrea divaricata"
 ]
}

 The dataset includes 2070 records from 162 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025284-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.8235473.v1
title: Astec-Pm7 (Wild type Phallusia mammillata embryo, live SPIM imaging, stages 7-12)

description: Astec-Pm7 Live embryonic development of Phallusia mammillata 
(Phlebobranch ascidian). <br><br>Cell membranes were fluorescently labeled by microinjection of mRNA encoding PH-citrine into unfertilized egg. The embryo has been live imaged with a MuVi-SPIM for two and a half hours, from the 44-cell stage (Tp 1, St. 7) up to the mid gastrulation (Tp 79, St. 12).<br>Whole 
cells were segmented using the ASTEC pipeline. Surface meshes were 
produced using the VTK library and MeshLab.<br><br>The period between time points is 100 seconds after normalization on the average development at 18°C.<br> <br>* The four angle fusion images obtained using the ASTEC pipeline are shared in .inr format (fuse.tar.gz archive file). <br>* Whole cells were segmented using the ASTEC pipeline and shared in .inr format (post.tar.gz archive file).<br>* Surface 
meshes (.obj) povided in the mesh.tar.gz archive were produced using the VTK library and MeshLab.<br>* Individual cell geometric properties are shared in two different formats, .xml and .pkl (properties.tar.gz archive file).
DOI: 10.15468/dl.k4c7ap
title: Occurrence Download

description: A dataset containing 9247 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Catalpa speciosa"
 ]
}

 The dataset includes 9247 records from 254 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025287-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id10538.1
title: StrainInfo SI-ID 10538.1

description: StrainInfo dataset 10538 about a strain of Salipaludibacillus agaradhaerens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10367.1
title: StrainInfo SI-ID 10367.1

description: StrainInfo dataset 10367 about a strain of Streptococcus gallolyticus subsp. gallolyticus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10368.1
title: StrainInfo SI-ID 10368.1

description: StrainInfo dataset 10368 about a strain of Streptococcus gallolyticus subsp. gallolyticus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10369.1
title: StrainInfo SI-ID 10369.1

description: StrainInfo dataset 10369 about a strain of Xanthomonas hortorum pv. hederae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10446.1
title: StrainInfo SI-ID 10446.1

description: StrainInfo dataset 10446 about a strain of Vibrio chagasii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10447.1
title: StrainInfo SI-ID 10447.1

description: StrainInfo dataset 10447 about a strain of Vibrio chagasii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10448.1
title: StrainInfo SI-ID 10448.1

description: StrainInfo dataset 10448 about a strain of Vibrio. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10449.1
title: StrainInfo SI-ID 10449.1

description: StrainInfo dataset 10449 about a strain of Vibrio. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10539.1
title: StrainInfo SI-ID 10539.1

description: StrainInfo dataset 10539 about a strain of Shouchella gibsonii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10540.1
title: StrainInfo SI-ID 10540.1

description: StrainInfo dataset 10540 about a strain of Sutcliffiella halmapala. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id10541.1
title: StrainInfo SI-ID 10541.1

description: StrainInfo dataset 10541 about a strain of Heyndrickxia oleronia. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.