cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34943/f2967eec-e3a6-469b-a28a-03f677df7a8b
title: Patricia Bay Echosounder, Bioacoustic Deployed 2015-04-01

description: The ASL Zooplankton Acoustic Profiler 1007 was deployed on 2015-04-01 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Echosounder, Bioacoustic. Echosounders are used to measure acoustic backscatter as a proxy for detecting zooplankton, fish, bubbles or other particles in the water-column. An echosounder has one or more transducers which emit acoustic pulses at a particular frequency. When the pulses strike animals or other objects in the water, echoes are produced, which can be detected and converted by the transducers back into electrical signals. Software is then used to determine distances, sizes, concentrations and movements of organisms and other objects in the water. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/fe9722dc-fe81-442a-a58a-dd8538fb3f94
title: Juan de Fuca Strait Acoustic Doppler Current Profiler 2 MHz Deployed 2015-04-09

description: The Nortek Aquadopp Profiler AQD 8455 was deployed on 2015-04-09 at Juan de Fuca Strait. Juan de Fuca Strait is a large body of water that connects the Salish Sea to the Pacific Ocean. This device is a Acoustic Doppler Current Profiler 2 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/20de37a4-4759-4b7f-9ab9-763ad67bfce2
title: Strait of Georgia East Echosounder, Bioacoustic Deployed 2015-08-27

description: The ASL Zooplankton Acoustic Profiler 1008 was deployed on 2015-08-27 at Strait of Georgia East. Strait of Georgia East refers to an eastern area of the Strait of Georgia. This device is a Echosounder, Bioacoustic. Echosounders are used to measure acoustic backscatter as a proxy for detecting zooplankton, fish, bubbles or other particles in the water-column. An echosounder has one or more transducers which emit acoustic pulses at a particular frequency. When the pulses strike animals or other objects in the water, echoes are produced, which can be detected and converted by the transducers back into electrical signals. Software is then used to determine distances, sizes, concentrations and movements of organisms and other objects in the water. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/8856792a-32a6-4e02-b379-82bf2ff3d7dd
title: Fraser River Delta Upper Slope Echosounder, Bioacoustic Deployed 2015-09-14

description: The ASL Zooplankton Acoustic Profiler 1009 was deployed on 2015-09-14 at Fraser River Delta Upper Slope. This site is located on the upper slope of the Fraser River delta, where depth is approximately 100 metres. This device is a Echosounder, Bioacoustic. Echosounders are used to measure acoustic backscatter as a proxy for detecting zooplankton, fish, bubbles or other particles in the water-column. An echosounder has one or more transducers which emit acoustic pulses at a particular frequency. When the pulses strike animals or other objects in the water, echoes are produced, which can be detected and converted by the transducers back into electrical signals. Software is then used to determine distances, sizes, concentrations and movements of organisms and other objects in the water. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/d6475f0a-d10b-44fa-925d-ddffb631d51d
title: Fraser River Delta Lower Slope Acoustic Doppler Current Profiler 1 MHz Deployed 2015-08-30

description: The Nortek Aquadopp HR-Profiler 1 MHz 5281 was deployed on 2015-08-30 at Fraser River Delta Lower Slope. This site is located on the lower slope of the Fraser River delta, where depth is approximately 150 metres. This device is a Acoustic Doppler Current Profiler 1 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.5281/zenodo.8187689
title: TCGA Glioblastoma Multiforme (GBM) Gene Expression

description: <strong>Abstract:</strong> The Cancer Genome Atlas (TCGA) was a large-scale collaborative project initiated by the National Cancer Institute (NCI) and the National Human Genome Research Institute (NHGRI). It aimed to comprehensively characterize the genomic and molecular landscape of various cancer types. This dataset contains information about GBM, an aggressive and highly malignant brain tumor that arises from glial cells, characterized by rapid growth and infiltrative behavior. The gene expression profile was measured experimentally using the Affymetrix HT Human Genome U133a microarray platform by the Broad Institute of MIT and Harvard University cancer genomic characterization center. The Sample IDs serve as unique identifiers for each sample. <strong>Inspiration:</strong> This dataset was uploaded to UBRITE for GTKB project. <strong>Instruction:</strong> The log2(x) normalization was removed, and z-normalization was performed on the dataset using a Python script. <strong>Acknowledgments:</strong> Goldman, M.J., Craft, B., Hastie, M. et al. Visualizing and interpreting cancer genomics data via the Xena platform. Nat Biotechnol (2020). https://doi.org/10.1038/s41587-020-0546-8 The Cancer Genome Atlas Research Network., Weinstein, J., Collisson, E. et al. The Cancer Genome Atlas Pan-Cancer analysis project. Nat Genet 45, 1113–1120 (2013). https://doi.org/10.1038/ng.2764 <strong>U-BRITE last update: </strong>07/13/2023
description: U-BRITE location: /data/project/ubrite/gtkb/TCGA/GeneExp
description: {"references": ["Goldman, M.J., Craft, B., Hastie, M. et al. Visualizing and interpreting cancer genomics data via the Xena platform. Nat Biotechnol (2020). https://doi.org/10.1038/s41587-020-0546-8", "The Cancer Genome Atlas Research Network., Weinstein, J., Collisson, E. et al. The Cancer Genome Atlas Pan-Cancer analysis project. Nat Genet 45, 1113\u20131120 (2013). https://doi.org/10.1038/ng.2764"]}
DOI: 10.5281/zenodo.8187688
title: TCGA Glioblastoma Multiforme (GBM) Gene Expression

description: <strong>Abstract:</strong> The Cancer Genome Atlas (TCGA) was a large-scale collaborative project initiated by the National Cancer Institute (NCI) and the National Human Genome Research Institute (NHGRI). It aimed to comprehensively characterize the genomic and molecular landscape of various cancer types. This dataset contains information about GBM, an aggressive and highly malignant brain tumor that arises from glial cells, characterized by rapid growth and infiltrative behavior. The gene expression profile was measured experimentally using the Affymetrix HT Human Genome U133a microarray platform by the Broad Institute of MIT and Harvard University cancer genomic characterization center. The Sample IDs serve as unique identifiers for each sample. <strong>Inspiration:</strong> This dataset was uploaded to UBRITE for GTKB project. <strong>Instruction:</strong> The log2(x) normalization was removed, and z-normalization was performed on the dataset using a Python script. <strong>Acknowledgments:</strong> Goldman, M.J., Craft, B., Hastie, M. et al. Visualizing and interpreting cancer genomics data via the Xena platform. Nat Biotechnol (2020). https://doi.org/10.1038/s41587-020-0546-8 The Cancer Genome Atlas Research Network., Weinstein, J., Collisson, E. et al. The Cancer Genome Atlas Pan-Cancer analysis project. Nat Genet 45, 1113–1120 (2013). https://doi.org/10.1038/ng.2764 <strong>U-BRITE last update: </strong>07/13/2023
description: U-BRITE location: /data/project/ubrite/gtkb/TCGA/GeneExp
description: {"references": ["Goldman, M.J., Craft, B., Hastie, M. et al. Visualizing and interpreting cancer genomics data via the Xena platform. Nat Biotechnol (2020). https://doi.org/10.1038/s41587-020-0546-8", "The Cancer Genome Atlas Research Network., Weinstein, J., Collisson, E. et al. The Cancer Genome Atlas Pan-Cancer analysis project. Nat Genet 45, 1113\u20131120 (2013). https://doi.org/10.1038/ng.2764"]}
DOI: 10.34943/75b42784-ad26-4a14-8fee-be914cdd2dff
title: Cambridge Bay Ice Profiler Deployed 2015-08-27

description: The ASL Shallow Water Ice Profiler 53029 was deployed on 2015-08-27 at Cambridge Bay. Cambridge Bay is located on Victoria Island in the Kitikmeot Region of Nunavut, Canada. This device is a Ice Profiler. Ice Profiler instruments are upward looking single beam echosounders mounted on the ocean floor and are specialized to measure ice draft. They can estimate ice forces, determine the thickness of ice, and the detail of the underside of sea-ice. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/24018f43-342e-4eb1-99ab-4c68ff78b5cf
title: Patricia Bay Echosounder, Bioacoustic Deployed 2015-08-29

description: The ASL Zooplankton Acoustic Profiler 1007 was deployed on 2015-08-29 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Echosounder, Bioacoustic. Echosounders are used to measure acoustic backscatter as a proxy for detecting zooplankton, fish, bubbles or other particles in the water-column. An echosounder has one or more transducers which emit acoustic pulses at a particular frequency. When the pulses strike animals or other objects in the water, echoes are produced, which can be detected and converted by the transducers back into electrical signals. Software is then used to determine distances, sizes, concentrations and movements of organisms and other objects in the water. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/4f9e5016-eefa-4bb8-a0ad-00a95baa6eb8
title: Fraser River Delta Upper Slope Acoustic Doppler Current Profiler 1 MHz Deployed 2015-09-14

description: The Nortek Aquadopp HR-Profiler 1 MHz 7058 was deployed on 2015-09-14 at Fraser River Delta Upper Slope. This site is located on the upper slope of the Fraser River delta, where depth is approximately 100 metres. This device is a Acoustic Doppler Current Profiler 1 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/09197042-2d1b-4a73-b1cf-8e76d0160ceb
title: Fraser River Delta Upper Slope Echosounder, Bioacoustic Deployed 2015-09-16

description: The ASL Zooplankton Acoustic Profiler 1009 was deployed on 2015-09-16 at Fraser River Delta Upper Slope. This site is located on the upper slope of the Fraser River delta, where depth is approximately 100 metres. This device is a Echosounder, Bioacoustic. Echosounders are used to measure acoustic backscatter as a proxy for detecting zooplankton, fish, bubbles or other particles in the water-column. An echosounder has one or more transducers which emit acoustic pulses at a particular frequency. When the pulses strike animals or other objects in the water, echoes are produced, which can be detected and converted by the transducers back into electrical signals. Software is then used to determine distances, sizes, concentrations and movements of organisms and other objects in the water. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/d7187a35-6d0f-4ece-bb27-dee2a8b2b155
title: Fraser River Delta Upper Slope Acoustic Doppler Current Profiler 1 MHz Deployed 2015-09-16

description: The Nortek Aquadopp HR-Profiler 1 MHz 7058 was deployed on 2015-09-16 at Fraser River Delta Upper Slope. This site is located on the upper slope of the Fraser River delta, where depth is approximately 100 metres. This device is a Acoustic Doppler Current Profiler 1 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/98569b3e-7f6d-4fd3-a1b0-0e305eaa3d31
title: Juan de Fuca Strait Acoustic Doppler Current Profiler 2 MHz Deployed 2015-09-13

description: The Nortek Aquadopp Profiler AQP5431 AQD8398 was deployed on 2015-09-13 at Juan de Fuca Strait. Juan de Fuca Strait is a large body of water that connects the Salish Sea to the Pacific Ocean. This device is a Acoustic Doppler Current Profiler 2 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/1edbb68f-9345-4789-be59-fbd325017771
title: Juan de Fuca Strait Acoustic Doppler Current Profiler 2 MHz Deployed 2016-04-15

description: The Nortek Aquadopp Profiler AQD 8455 was deployed on 2016-04-15 at Juan de Fuca Strait. Juan de Fuca Strait is a large body of water that connects the Salish Sea to the Pacific Ocean. This device is a Acoustic Doppler Current Profiler 2 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/59a14b05-e1d8-47a7-bb73-5d4ee5f40f86
title: Patricia Bay Echosounder, Bioacoustic Deployed 2016-04-30

description: The ASL Zooplankton Acoustic Profiler 1007 was deployed on 2016-04-30 at Patricia Bay. Patricia Bay is located in the Saanich Inlet, on the southern tip of Vancouver Island. This device is a Echosounder, Bioacoustic. Echosounders are used to measure acoustic backscatter as a proxy for detecting zooplankton, fish, bubbles or other particles in the water-column. An echosounder has one or more transducers which emit acoustic pulses at a particular frequency. When the pulses strike animals or other objects in the water, echoes are produced, which can be detected and converted by the transducers back into electrical signals. Software is then used to determine distances, sizes, concentrations and movements of organisms and other objects in the water. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/4e50b2b5-477b-4ef5-921e-010f986fa8b5
title: Strait of Georgia East Echosounder, Bioacoustic Deployed 2016-05-01

description: The ASL Zooplankton Acoustic Profiler 1008 was deployed on 2016-05-01 at Strait of Georgia East. Strait of Georgia East refers to an eastern area of the Strait of Georgia. This device is a Echosounder, Bioacoustic. Echosounders are used to measure acoustic backscatter as a proxy for detecting zooplankton, fish, bubbles or other particles in the water-column. An echosounder has one or more transducers which emit acoustic pulses at a particular frequency. When the pulses strike animals or other objects in the water, echoes are produced, which can be detected and converted by the transducers back into electrical signals. Software is then used to determine distances, sizes, concentrations and movements of organisms and other objects in the water. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/f2eaa0ec-dc34-499c-aada-b92adcad3c42
title: Fraser River Delta Lower Slope Acoustic Doppler Current Profiler 1 MHz Deployed 2016-05-01

description: The Nortek Aquadopp HR-Profiler 1 MHz 5281 was deployed on 2016-05-01 at Fraser River Delta Lower Slope. This site is located on the lower slope of the Fraser River delta, where depth is approximately 150 metres. This device is a Acoustic Doppler Current Profiler 1 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/71893187-f5a9-4aae-b55d-778b6059c1d9
title: Fraser River Delta Upper Slope Echosounder, Bioacoustic Deployed 2016-05-03

description: The ASL Zooplankton Acoustic Profiler 1009 was deployed on 2016-05-03 at Fraser River Delta Upper Slope. This site is located on the upper slope of the Fraser River delta, where depth is approximately 100 metres. This device is a Echosounder, Bioacoustic. Echosounders are used to measure acoustic backscatter as a proxy for detecting zooplankton, fish, bubbles or other particles in the water-column. An echosounder has one or more transducers which emit acoustic pulses at a particular frequency. When the pulses strike animals or other objects in the water, echoes are produced, which can be detected and converted by the transducers back into electrical signals. Software is then used to determine distances, sizes, concentrations and movements of organisms and other objects in the water. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/d3544b76-da95-48b2-8075-c987e0276d1c
title: Wally Land Acoustic Doppler Current Profiler 2 MHz Deployed 2016-05-14

description: The Nortek Aquadopp Profiler AQD 9917 was deployed on 2016-05-14 at Wally Land. Wally Land is a location within Barkley Canyon gas hydrate field, where hydrate dynamics are observed. This device is a Acoustic Doppler Current Profiler 2 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/accb5651-247d-4f1f-925f-958248e120c9
title: Barkley Canyon Axis Acoustic Doppler Current Profiler 55 kHz Deployed 2016-06-14

description: The Nortek Signature55 Current Profiler 0056 was deployed on 2016-06-14 at Barkley Canyon Axis. Barkley Canyon Axis is located within Barkley Canyon, where benthic processes, biodiversity, sediment dynamics are observed. This device is a Acoustic Doppler Current Profiler 55 kHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/48026b03-531b-4921-a368-9b318567a0eb
title: Barkley Canyon Mid-East Acoustic Doppler Current Profiler 2 MHz Deployed 2016-06-14

description: The Nortek Aquadopp HR-Profiler 2 MHz 2978 was deployed on 2016-06-14 at Barkley Canyon Mid-East. Barkley Canyon Mid-East is a location in Barkley Canyon near a canyon wall. At this location, benthic processes, biodiversity, and sediment dynamics are observed. This device is a Acoustic Doppler Current Profiler 2 MHz. Acoustic Doppler Current Profilers are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.