cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.tvzdvm
title: Occurrence Download

description: A dataset containing 5382 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heleioporus eyrei (Gray, 1845)"
 ]
}

 The dataset includes 5382 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001198-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3jcdsb
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sinarundinaria alpina (K.Schum.) C.S.Chao & Renvoize"
 ]
}

 The dataset includes 34 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001175-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.58n3yq
title: Occurrence Download

description: A dataset containing 904 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ipomoea tricolor Cav.)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Literature Occurrence)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 904 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001200-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6shcfc
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (90fd6680-349f-11d8-aa2d-b8a03c50a862, 26a503f6-b337-424b-8d7a-b3ab11d2597f, 8e1a97a0-3ca8-11d9-8439-b8a03c50a862, 19456090-b49a-11d8-abeb-b8a03c50a862, 33d232b5-5cc2-4521-8bd6-121c5bb41c32, 6ba9a8cc-513a-4a51-bf93-6f5de8040a96, bc092ff0-02e4-11dc-991f-b8a03c50a862)",
 "TaxonKey is Brugmansia sanguinea (Ruiz & Pav.) D.Don"
 ]
}

 The dataset includes 123 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001176-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hh27u7
title: Occurrence Download

description: A dataset containing 31575 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is one of (Brazil, Argentina, Paraguay)",
 "TaxonKey is Ictinia plumbea (Gmelin, 1788)",
 "Year 1000-2024"
 ]
}

 The dataset includes 31575 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001199-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntzrc7
title: Occurrence Download

description: A dataset containing 189904 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Veronica hederifolia L.)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Literature Occurrence)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 189904 records from 1148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001182-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8w9aqr
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Catathyridium jenynsii (Günther, 1862)"
 ]
}

 The dataset includes 136 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0340825-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2b8tx2
title: Occurrence Download

description: A dataset containing 4210 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Asia, Europe)",
 "CoordinateUncertaintyInMeters 0.0-2100.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Canis lupus Linnaeus, 1758",
 "Year 1970-2020"
 ]
}

 The dataset includes 4210 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015160-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-183735
title: Proydennyy put' = [Distance travelled], 2005

description: [description english/roman)] Nikolai Egorov. Proydennyy put' = [Distance travelled]. Maloyaroslavets, Russia: Evangelist Publishing, 2005.
DOI: 10.15468/dl.ub6t3z
title: Occurrence Download

description: A dataset containing 243 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chinese Taipei",
 {
 "or" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "DatasetKey is iNaturalist Research-grade Observations",
 "DatasetKey is Observation.org, Nature data from around the World",
 "DatasetKey is Investigation Current Status of River in Taiwan between 2002 to 2020"
 ]
 },
 "Geometry POLYGON((119.4389643073082 22.558776589343324,122.0756830573082 22.558776589343324,122.0756830573082 25.195495339343324,119.4389643073082 25.195495339343324,119.4389643073082 22.558776589343324))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Calidris pygmaea (Linnaeus, 1758)"
 ]
}

 The dataset includes 243 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322286-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-1690
title: Seiatel' istiny = The sower of truth, vol. 15, no. 10 (October 1930)

description: [description english/roman)] Monthly
DOI: 10.15468/dl.hp5h26
title: Occurrence Download

description: A dataset containing 23021 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Kenya",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year 2023-2023"
 ]
}

 The dataset includes 23021 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017630-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-1695
title: Seiatel' istiny = The sower of truth, vol. 15, no. 10 (October 1930)

description: [description english/roman)] Monthly
DOI: 10.15468/dl.hr3x8s
title: Occurrence Download

description: A dataset containing 1003650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-180 -85.05113,-33 -85.05113,-27.42187 23.0393,-11.95313 62.1655,-6.32812 85.05113,-33 85.05113,-180 85.05113,-180 -85.05113))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Podiceps auritus (Linnaeus, 1758)"
 ]
}

 The dataset includes 1003650 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0362485-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6rzg57
title: Occurrence Download

description: A dataset containing 404 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Cabassous unicinctus (Linnaeus, 1758)"
 ]
}

 The dataset includes 404 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068002-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-1727
title: Seiatel' istiny = The sower of truth, vol. 15, no. 12 (December 1930)

description: [description english/roman)] Monthly
DOI: 10.15468/dl.rkrf3p
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Synodontis filamentosus Boulenger, 1901"
 ]
}

 The dataset includes 95 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0340863-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hgk5hz
title: Occurrence Download

description: A dataset containing 1735 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lycaon pictus (Temminck, 1820)"
 ]
}

 The dataset includes 1735 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010629-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-195464
title: 1963 union congress
DOI: 10.15468/dl.76xq5j
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 {
 "or" : [
 "IucnRedListCategory is EN",
 "IucnRedListCategory is CR",
 "IucnRedListCategory is VU"
 ]
 },
 "TaxonKey is Balaenoptera borealis Lesson, 1828",
 "Year 2010-2020"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127335-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bzakgk
title: Occurrence Download

description: A dataset containing 20246 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Platyrinchus cancrominus P.L.Sclater & Salvin, 1860"
 ]
}

 The dataset includes 20246 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067161-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-1953
title: Seiatel' istiny = The sower of truth, vol. 17, no. 1 (January 1932)

description: [description english/roman)] Monthly
DOI: 10.25549/pcra-c14-183598
title: Proydennyy put' = [Distance travelled], 2005

description: [description english/roman)] Nikolai Egorov. Proydennyy put' = [Distance travelled]. Maloyaroslavets, Russia: Evangelist Publishing, 2005.
DOI: 10.15468/dl.vwabbq
title: Occurrence Download

description: A dataset containing 458 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 {
 "or" : [
 "IucnRedListCategory is VU",
 "IucnRedListCategory is EN",
 "IucnRedListCategory is CR"
 ]
 },
 "TaxonKey is Balaenoptera physalus (Linnaeus, 1758)",
 "Year 2010-2020"
 ]
}

 The dataset includes 458 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127339-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xdpwqr
title: Occurrence Download

description: A dataset containing 62813 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Laboratory of Tree-Ring Research Natural History Collection"
 ]
}

 The dataset includes 62813 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014692-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pd35bg
title: Occurrence Download

description: A dataset containing 50369 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Silene gallica L."
 ]
}

 The dataset includes 50369 records from 815 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017623-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-183571
title: Proydennyy put' = [Distance travelled], 2005

description: [description english/roman)] Nikolai Egorov. Proydennyy put' = [Distance travelled]. Maloyaroslavets, Russia: Evangelist Publishing, 2005.
DOI: 10.15468/dl.tynuh2
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anchoa panamensis (Steindachner, 1876)"
 ]
}

 The dataset includes 78 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0340838-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qv3f7w
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Batrachyla antartandica Barrio, 1967"
 ]
}

 The dataset includes 125 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001570-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-183637
title: Proydennyy put' = [Distance travelled], 2005

description: [description english/roman)] Nikolai Egorov. Proydennyy put' = [Distance travelled]. Maloyaroslavets, Russia: Evangelist Publishing, 2005.
DOI: 10.15468/dl.9265df
title: Occurrence Download

description: A dataset containing 99 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nosferatu bartoni (Bean, 1892)"
 ]
}

 The dataset includes 99 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0340827-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-183641
title: Proydennyy put' = [Distance travelled], 2005

description: [description english/roman)] Nikolai Egorov. Proydennyy put' = [Distance travelled]. Maloyaroslavets, Russia: Evangelist Publishing, 2005.
DOI: 10.25549/pcra-c14-183749
title: Proydennyy put' = [Distance travelled], 2005

description: [description english/roman)] Nikolai Egorov. Proydennyy put' = [Distance travelled]. Maloyaroslavets, Russia: Evangelist Publishing, 2005.
DOI: 10.25549/pcra-ouc11187337
title: Put' = Voie = [The way], no. 43 (April-June 1934)

description: [description english/roman)] Irregular frequency
DOI: 10.15468/dl.sw96uq
title: Occurrence Download

description: A dataset containing 132082121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 132082121 records from 6780 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011285-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-04.3086384/2553669
title: Data for EMSL Project 51287 from April 2024
DOI: 10.15468/dl.k85w37
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-79.74516 42.81175,-78.87734 42.81175,-78.87734 43.27751,-79.74516 43.27751,-79.74516 42.81175))",
 "HasGeospatialIssue is false",
 "TaxonKey is Vespertilionidae"
 ]
}

 The dataset includes 18 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018814-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-04.3086386/2553670
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086387/2553671
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086388/2553672
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086390/2553673
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086393/2553674
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086395/2553675
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086396/2553676
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086400/2553677
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086401/2553678
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086402/2553679
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3086403/2553680
title: Data for EMSL Project 51287 from April 2024
DOI: 10.15468/dl.n6naj4
title: Occurrence Download

description: A dataset containing 17011 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quercus phellos",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17011 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053668-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30203953
title: <b>Lung adenocarcinoma cells respond differently to mechanical stress in 3D versus 2D environments</b>

description: This dataset contains raw and processed data supporting the study <i>“Lung adenocarcinoma cells respond differently to mechanical stress in 3D versus 2D environments.”</i> It includes RNA-seq data, quantitative analyses, and imaging data used to evaluate the effects of respiratory motion–mimicking mechanical stress on lung adenocarcinoma cells cultured in 2D and 3D decellularized lung scaffolds.
DOI: 10.6084/m9.figshare.30203953.v1
title: <b>Lung adenocarcinoma cells respond differently to mechanical stress in 3D versus 2D environments</b>

description: This dataset contains raw and processed data supporting the study <i>“Lung adenocarcinoma cells respond differently to mechanical stress in 3D versus 2D environments.”</i> It includes RNA-seq data, quantitative analyses, and imaging data used to evaluate the effects of respiratory motion–mimicking mechanical stress on lung adenocarcinoma cells cultured in 2D and 3D decellularized lung scaffolds.
DOI: 10.15468/dl.96xw4p
title: Occurrence Download

description: A dataset containing 365 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Freshwater fish records at The University of the South Pacific"
 ]
}

 The dataset includes 365 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053671-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xafgtr
title: Occurrence Download

description: A dataset containing 753 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hamamelis mollis",
 "HasCoordinate is true"
 ]
}

 The dataset includes 753 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053672-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gmz75w
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "TaxonKey is Aerides rosea"
 ]
}

 The dataset includes 54 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053673-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.35vg55
title: Occurrence Download

description: A dataset containing 41816 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ribes sanguineum",
 "HasCoordinate is true"
 ]
}

 The dataset includes 41816 records from 288 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053674-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7zv22c
title: Occurrence Download

description: A dataset containing 478 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.2_1",
 "TaxonKey is Canis lupus",
 "Year 1000-2025"
 ]
}

 The dataset includes 478 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053675-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.639v3a
title: Occurrence Download

description: A dataset containing 3195 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus oocarpa"
 ]
}

 The dataset includes 3195 records from 145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053676-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17429436
title: Data and Code For: Shifts in phenology and species ranges synergistically alter the timing and species composition of the flowering season
title: Shifts in Distributions, Flowering Phenology, and Community-level Flowering Patterns in the United States

description:  

This submission provides all the data and R code necessary to 1) generate the species distribution estimates and phenological predictions underlying all analyses, and 2) all results presented in the main text of the manuscript titled "Shifts in phenology and species ranges synergistically alter the timing and species composition of the flowering season" (Ramirez-Parada, Park, Peng, Nishino, Kartesz, Record, Davis, and Mazer, 2025). A preprint of this work can be accessed at: https://doi.org/10.32942/X28W5Z . This work is currently in press in Global Change Biology (DOI pending).

In order for the code to work, users need to preserve the folder structure of the code and data, as the R Markdown files in the "Code" folder have relative file paths that read and write files within the "Data" folder and subfolders therein. These two folders are placed at the same level (i.e., they should both be stored within the same folder). Moving either will require re-writing the filepaths across Rmds.

For detailed descriptions of all materials (code and data) and instructions for using them, please refer to the "READ ME.md" file within "Project folder" and the main text of the manuscript.