cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.kk85k/3
title: FutureProjections

description: FutureProjections

hr2010 is a spatial layer that distinguishes 32 ha cells in Michigan, USA as nonsuitable (0),  low suitability (1), moderate suitability (2), and high suitability (3) habitat for Kirtland's warbler in 2010. The layer was derived from hs2010, where 25% of suitable habitat cells were randomly selected  and their habitat suitability values were reduced by 1 suitability class. The layer can be used as an input file for the Spatial Data subprogram in program RAMAS GIS.

hs2010 is a spatial layer that distinguishes 32 ha cells in Michigan, USA as nonsuitable (0), low suitability (1), moderate suitability (2), and high suitability (3) habitat for Kirtland's warbler in 2010. The layer can be used as an input file for the Spatial Data subprogram in program RAMAS GIS.

nc2010 is a spatial layer used to assess the impacts of elimination of the cowbird trapping program  on Kirtland's warbler population dynamics, assuming a 57% reduction in productivity. The layer can be  used as an input file for the Spatial Data subprogram in program RAMAS GIS.

nc2010_41 is a spatial layer used to assess the impacts of elimination of the cowbird trapping program  on Kirtland's warbler population dynamics, assuming a 41% reduction in productivity. The layer can be  used as an input file for the Spatial Data subprogram in program RAMAS GIS.

rc2010 is a spatial layer used to assess the impacts of spatially-restricted cowbird trapping to the core breeding area on Kirtland's warbler population dynamics, assuming a 57% reduction in productivity in satellite breeding patches in the Lower Peninsula of Michigan, USA. The layer can be used as an input file for the  Spatial Data subprogram in program RAMAS GIS.

rc2010_41 is a spatial layer used to assess the impacts of spatially-restricted cowbird trapping to the core breeding area on Kirtland's warbler population dynamics, assuming a 41% reduction in productivity in satellite breeding patches in the Lower Peninsula of Michigan, USA. The layer can be used as an input file for the  Spatial Data subprogram in program RAMAS GIS.

FutureProjections -&gt; RandomizedPrecipitation

a1-a50, b1-b50, c1-c50, d1-d50, and e1-e50 are spatial layers that contain randomly generated total March 
precipitation values in cells that contain suitable habitat for Kirtland's warbler. The values were  generated based on the lower 90th percentile of the historical precipitation distribution recorded at the  Nassau NOAA station (Bahamas) between 1994 and 2013. The layers can be used as input files for the 
Spatial Data subprogram in program RAMAS GIS.
DOI: 10.5061/dryad.nt6bq/1
title: Q123_t1_finalpercent

description: This is the first field sampling of the early transplantation experiment. Data in a row represent percentage cover data of a plot. The first six columns are factors that uniquely identify each plot. The rest are main data of percentage cover of each taxon.
DOI: 10.5061/dryad.nt6bq/2
title: Q123_t2_finalpercent

description: This is the second field sampling of the early transplantation experiment. Data in a row represent percentage cover data of a plot. The first six columns are factors that uniquely identify each plot. The rest are main data of percentage cover of each taxon.
DOI: 10.5061/dryad.nt6bq/3
title: Q456_t2_finalpercent

description: This is the first field sampling of the late transplantation experiment. Data in a row represent percentage cover data of a plot. The first six columns are factors that uniquely identify each plot. The rest are main data of percentage cover of each taxon.
DOI: 10.5061/dryad.nt6bq/4
title: Q456_t3_finalpercent

description: This is the second field sampling of the late transplantation experiment. Data in a row represent percentage cover data of a plot. The first six columns are factors that uniquely identify each plot. The rest are main data of percentage cover of each taxon.
DOI: 10.5061/dryad.qn370/1
title: Vogwill Background summary data

description: Fitness and transcription data used in this manuscript.
DOI: 10.5061/dryad.r02r1/1
title: Data Files

description: Contains data for colony resistance profile, gene expression data and otu count table.
DOI: 10.5061/dryad.r540f/1
title: Hpolygyrus infection

description: File contains data on mouse strain, diet, parasite dose, weight, worm load, and intestinal permeability to FD4.
DOI: 10.5061/dryad.rb3b0d2p.2
title: Data from: Parent-of-origin effects on gene expression and DNA methylation in the maize endosperm
DOI: 10.5061/dryad.rb3b0d2p.2/1.2
title: maize imprinting ms supplemental dataset1

description: RPKM values for all maize genes in biological replicates of endosperm or embryo tissue isolated from B73 and Mo17 genotypes
DOI: 10.5061/dryad.t6p8c/7
title: scriptForSubmission
DOI: 10.5061/dryad.v66b2/1
title: runSimulations

description: This file contains R scripts to simulated discrete traits and phylogenies used in the analyses
DOI: 10.5061/dryad.04dv4/1
title: Abundance and biomass from grab samples

description: Abundance and biomass of benthic invertebrates from the Smith-McIntyre grab samples per species and per station. Benthic invertebrates were sampled by taking five 0.1 m2 Smith-McIntyre grabs at haphazard locations within the station box. For each grab, a 50ml sediment sample was retained for grain size analysis and the rest of the sample was sorted over a 1 mm sieve and preserved in 4% formalin for identification. All invertebrates were identified to the highest practicable taxonomic resolution (mostly genus or family) and the wet weight of each individual organism was estimated after blotting.
DOI: 10.5061/dryad.04dv4/2
title: Station positions and sediment composition

description: Latitude and longitude of the station and their sediment composition from particle size analysis. Fishing effort is given in the paper. Particle size distributions were determined using a Malvern laser diffraction particle sizer (Blott & Pye 2001).
DOI: 10.5061/dryad.04dv4/4
title: Otter trawl catches

description: The catch composition of all species per trawl for the otter trawl catches. Two tows of 30 min were carried out at each station with an otter trawl (distance across mouth of the net 25 m, 80 mm diamond mesh cod-end) at a speed of 3 knots between 07.45h and 17.00h. The total catch number and weight per species was measured.
DOI: 10.5061/dryad.04dv4/5
title: Fish species Length-weight data

description: The length and weight for individual fish that was used to estimate the condition of the fish. The length (to the nearest mm) and weight (to the nearest g) of the individual fish in the catch was recorded. If the catch of a species in a haul was large (&gt;50 individuals), a subsample of ≥50 fish was measured and weighed. The BMI (body mass index) column is given here for quality assurance purposes only and not used in the analyses. Some values outside the possible range and have been marked as such.
DOI: 10.5061/dryad.158m0/2
title: morphology data

description: Archive with all morphology data used in the publication, along with R script for analysis
DOI: 10.5061/dryad.17h0t/1
title: survival and phenotype data

description: survival and phenotype data for experiments from coffs harbour (CH) and Lennox Head (LH)
DOI: 10.5061/dryad.2c2q7/1
title: Herrera and Lopez dataset

description: We present C stable isotope values of breath collected 10 and 720 minutes after bat capture, and C and N stable isotope values of bat whole blood.
DOI: 10.5061/dryad.2fp34/3
title: Eidolon helvum data 2007-2014

description: Here we present a spatial, morphological, demographic, genetic and serological dataset encompassing 2827 bats from nine countries over an 8-year period. Genetic data comprises cytochrome b mitochondrial sequences (n=608) and microsatellite genotypes from 18 loci (n=544). Tooth-cementum analyses (n=316) provide rare age-specific serologic data for a lyssavirus, a henipavirus and two rubulaviruses. Full details, including descriptors for column headings, are available in the associated Scientific Data Descriptor manuscript.
DOI: 10.5061/dryad.5fv17/1
title: ACTH challenge I

description: The file BragaGoncalves&Heistermannetal_ACTH I.csv contains the data used for the analysis of fecal glucocorticoid metabolites following the ACTH challenge I performed on 5 adult meerkats in 2012.
DOI: 10.5061/dryad.5fv17/2
title: ACTH challenge II

description: The data file BragaGoncalves&Heistermannetal_ACTH II.csv contains the data used for the analysis of fecal glucocorticoid metabolites following the ACTH challenge I performed on 10 adult meerkats in 2013.
DOI: 10.5061/dryad.5fv17/3
title: Correction for soil content

description: BragaGoncalves&Heistermannetal_soil contamination.csv contains the data used for the analysis of the effect of soil contamination in the recovery of fecal glucocorticoid metabolites from meerkat feces using the fecal samples from the 2013 ACTH challenge.
DOI: 10.5061/dryad.5fv17/4
title: FGCM response to water injections

description: The file BragaGoncalves&Heistermannetal_water injections.csv contains the data used for the analysis of fecal glucocorticoid metabolites following control water injections given to 4 adult male meerkats in 2013.
DOI: 10.5061/dryad.65m87/10
title: Case_Study_4_weed_management_evaluation_Raw_Image_Data_5_of_10

description: Part 5 of 10 of raw individual images with gps log and ground truth. GPS log and ground truth are in part 10.
DOI: 10.5061/dryad.65m87/11
title: Case_Study_4_weed_management_evaluation_Raw_Image_Data_6_of_10

description: Part 6 of 10 of raw individual images with gps log and ground truth. GPS log and ground truth are in part 10.
DOI: 10.5061/dryad.65m87/12
title: Case_Study_4_weed_management_evaluation_Raw_Image_Data_7_of_10

description: Part 7 of 10 of raw individual images with gps log and ground truth. GPS log and ground truth are in part 10.
DOI: 10.5061/dryad.65m87/13
title: Case_Study_4_weed_management_evaluation_Raw_Image_Data_8_of_10

description: Part 8 of 10 of raw individual images with gps log and ground truth. GPS log and ground truth are in part 10.
DOI: 10.5061/dryad.65m87/14
title: Case_Study_4_weed_management_evaluation_Raw_Image_Data_9_of_10

description: Part 9 of 10 of raw individual images with gps log and ground truth. GPS log and ground truth are in part 10.
DOI: 10.5061/dryad.65m87/15
title: Case_Study_4_weed_management_evaluation_Raw_Image_Data_10_of_10_GroundTruth

description: Part 10 of 10 of raw individual images with gps log and ground truth.
DOI: 10.5061/dryad.65m87/16
title: Case_Study_1_plant_height_corn_Raw_Image_Data_1_of_10
DOI: 10.5061/dryad.65m87/17
title: Case_Study_1_plant_height_corn_Raw_Image_Data_2_of_10
DOI: 10.5061/dryad.65m87/18
title: Case_Study_1_plant_height_corn_Raw_Image_Data_3_of_10
DOI: 10.5061/dryad.65m87/9
title: Case_Study_4_weed_management_evaluation_Raw_Image_Data_4_of_10

description: Part 4 of 10 of raw individual images with gps log and ground truth. GPS log and ground truth are in part 10.
DOI: 10.5061/dryad.69fc0/1
title: ppgm

description: This is a snapshot of the ppgm repository that is available on github. It contains code and data to run the analyses in the linked paper. Please see https://github.com/michellelawing/ppgm for the most up to date version of ppgm.
DOI: 10.5061/dryad.6hb49/1
title: Raw data with demographics, laboratory and point of care parameters
DOI: 10.5061/dryad.6hb49/2
title: DT1d1-1_aptem_130104142730000

description: Original ROTEM Data
DOI: 10.5061/dryad.6hb49/3
title: DT1d1-1_extem_130104142635000

description: Original ROTEM Data
DOI: 10.5061/dryad.6hb49/4
title: DT1d1-1_heptem_130104142820000

description: Original ROTEM Data
DOI: 10.5061/dryad.6hb49/5
title: DT1d1-2_aptem_130104202109000

description: Original ROTEM Data
DOI: 10.5061/dryad.6hb49/6
title: DT1d1-2_extem_130104202027000

description: Original ROTEM Data
DOI: 10.5061/dryad.6hb49/7
title: DT1d1-2_extem_130104202027000

description: Original ROTEM Data
DOI: 10.5061/dryad.6hb49/8
title: DT1d1-2_heptem_130104202155000

description: Original ROTEM Data
DOI: 10.5061/dryad.6hb49/9
title: DT1d2-1_aptem_130105084339000

description: Original ROTEM Data
DOI: 10.5061/dryad.d47c1/1
title: Wren biometrics

description: Wren biometric dataset
DOI: 10.5061/dryad.d47c1/2
title: Wren BBS

description: Wren BBS dataset
DOI: 10.5061/dryad.dg6jk.1
title: Data from: Ecological influences and morphological correlates of resting and maximal metabolic rates across teleost fish species
DOI: 10.5061/dryad.dg6jk.2
title: Data from: Ecological influences and morphological correlates of resting and maximal metabolic rates across teleost fish species
DOI: 10.5061/dryad.dg6jk.2/1.2
title: Killen et al Am Nat Table S1

description: Data used for the analysis by Killen et al. 2016, American Naturalist.
DOI: 10.5061/dryad.dg6jk.2/2.2
title: Fish_Phylogeny

description: Phylogeny used for the analysis by Killen et al. 2016, American Naturalist.
DOI: 10.5061/dryad.f3r67.2
title: Data from: The gut microbiota of the pine weevil is similar across Europe and resembles that of other conifer-feeding beetles
DOI: 10.5061/dryad.k6r44/1
title: concatenated plastid data

description: Concatenated four plastid regions of Fagus, including trnK-matK, trnL-trnF, trnH-psbA, and atpB-rbcL regions
DOI: 10.5061/dryad.k6r44/2
title: LEAFY

description: Second intron of LEAFY data for Fagus
DOI: 10.5061/dryad.kk744/1
title: Matrix Wc: Collembola abundance

description: Abundance data for collembolan species (rows) sampled within the various sampling units (columns) used in the study.
DOI: 10.5061/dryad.kk744/2
title: Matrix Wv: Relative frequency of plant species

description: Relative frequency of each plant species (rows) within the various sampling units (columns) used in the study.
DOI: 10.5061/dryad.kk744/3
title: Matrix E: Abiotic data

description: Sampling units (rows) caracterized by soil physico-chemical and environmental variables (columns) as used in the study.
DOI: 10.5061/dryad.ng4b0/1
title: metadata

description: Describes all the variables in the csv file data.black.widow.spider
DOI: 10.5061/dryad.ng4b0/2
title: data.black.widow.spiders

description: Dataset used for the study. Variables are explained in the file metadata.
DOI: 10.5061/dryad.ng4b0/3
title: new.script.anotated

description: script allowing to redo all the analyses presented in the data and to produce the figures.
DOI: 10.5061/dryad.pc6sd/1
title: pop_Selommes_2002_to_2005

description: Genotypes of OSR plants from feral populations from 2002 to 2005. S is for seed and L for leaf.
DOI: 10.5061/dryad.pc6sd/2
title: fields_Selommes_2002_to_2005

description: Genotypes of OSR plants of fields from 2002 to 2005. S is for Seed, L for Leaf.
DOI: 10.5061/dryad.pf67c/1
title: Smith et al. data

description: Data used in analysis of: Camp Stability Predicts Patterns of Hunter-Gatherer Cooperation (Smith et al. 2016)
DOI: 10.5061/dryad.r02r1/2
title: OTU centroid sequences fasta file

description: OTU centroid sequences fasta file
DOI: 10.5061/dryad.r4105/1
title: Original_data

description: Copulation duration (p1), patterns of copulatory wounding (p2), and the results of the surgical experiments for virgin (p3) and mated (p4-6) of females of Drosophila erecta.
DOI: 10.5061/dryad.rb3b0d2p.1
title: Data from: Parent-of-origin effects on gene expression and DNA methylation in the maize endosperm
DOI: 10.5061/dryad.rb3b0d2p.2/2.2
title: maize imprinting ms supplemental dataset2

description: Allele-specific expression values for all maize genes in biological replicates of endosperm or embryo tissue isolated from B73xMo17 hybrid genotypes.
DOI: 10.5061/dryad.rd6v7/1
title: Ratnieks et al. Data reliability in citizen science (data sets)

description: Two data sets analyzed in Experiments 1 and 2, respectively, from the paper of Ratnieks et al., Data reliability in citizen science: learning curve and the effects of training method, volunteer background and experience on identification  accuracy of insects visiting ivy flowers. Methods in Ecology and Evolution.Both data sets are in the form of Tab-delimited text files.The variables included are as follows:Experiment 1:(each row represents one test of one participant, where participants were tested only once)Training = training method (pamphlet only, pamphlet + slide show, pamphlet + direct training)Degree = study degree of participants, biology-related (B) or not (N)Experience = prior experience of participants (Y/N)Experiment 2:(each participant was tested three times)Participant = unique participant idTestNo = test number (first, second or third)AdMat = type of additional training material (video or stills)Both datasets:Other variables present the proportion of insects identified correctly by each participant on each test.HB - honey beesSOCW - social waspsHBMHOV - honey bee-mimicking hover fliesWMHOV - wasp-mimicking hover fliesOTHFLY - non-syrphid fliesIVYBEE - ivy beesBB - bumble beesBF - butterfliesMO - mothsALL - all insects combined
DOI: 10.5061/dryad.tv41g/1
title: ESM 1 - AFM Data

description: Contains calculated Young's moduli from brains assayed in this study. Each sheet represents a different brain. From each brain, 5 slices were taken (labeled a-e). Within each slice, up to 8 locations were assayed (-1 to 7), where 0 is the GCL and 6 is the hilus. At each location, force curves were fitted for indentation depths up to 3000 microns (pre500-i3000). And for each indentation, five force curves were taken and averaged (0-4). Overall averages are located in the final sheet.
DOI: 10.5061/dryad.v676m/1
title: Species Counts and Covariates

description: This data set contains .csv files used to estimate abundance of nine cavity nesting species in the southern Piedmont ecoregion of the southeast United States. Data are formatted to be analyzed with the unmarked package in R.
DOI: 10.5061/dryad.vt968/1
title: Body shape

description: Raw body shape data in TPS format. The data includes all landmarks, semilandmarks and "helper points" (please, see the paper for details).
DOI: 10.5061/dryad.vt968/2
title: Pharyngeal jaw shape

description: Lower pharyngeal jaw shape data in TPS format. The data contains all landmarks and semilandmarks (prior to sliding). The dataset comprises missing landmark whose position has been reconstructed through reflection (please, see the paper for details).
DOI: 10.5061/dryad.vt968/3
title: Microsatellites

description: Microsatellite data. Numbers represent the different alleles. -9 stands for missing data.
DOI: 10.5061/dryad.04dv4/6
title: Nephrops norvegicus length and weight data

description: Nephrops norvegicus length and weight data that was used to estimate their condition. The carapace length and the total weight was measured, and their sex recorded.
DOI: 10.5061/dryad.28g01/5
title: Narrabeen Profiles

description: The pre-2005 survey measurements (survey method ‘EMERY’ in column 5) were undertaken at a fixed cross-shore spacing of 10 m (no interpolation), while surveys undertaken after this time (survey method ‘GPS’) have been interpolated to a standard 1 m cross-shore spacing. Intermittent survey measurements in the stable dune areas of each profile have been carried through to the following survey date and are identified by the flag ‘DUNEFILL’ in column 5. Elevation is relative to Australian Height Datum (AHD), corresponding to approximately mean sea level. Lat/long are referenced to GRS80 Ellipsoid. Refer to ReadMe file for site description, individual transect locations and full details of data file content and format.
DOI: 10.5061/dryad.28g01/6
title: Narrabeen Bathymetry

description: Cross-shore bathymetry transects to accompany the historical profile surveys have been obtained from 11 hydrographic surveys conducted by the NSW Office of Environment and Heritage (OEH) during the period 2011 - 2015. These hydrographic surveys have been undertaken using a variety of methods: a single-beam jetski-mounted system for shallow water depth soundings (8 jetski surveys in total); a single-beam boat-mounted system for shallow-intermediate water depth soundings (2 surveys); and a multi-beam boat-mounted system for intermediate water depth soundings at high resolution (1 survey). Refer to ReadMe file for full description of file format.
DOI: 10.5061/dryad.28g01/7
title: Narrabeen Inshore Waves

description: Hourly time-series of inshore significant wave height (Hs), peak wave period (Tp) and wave direction (Dir) at 10 m water depth directly seaward of each of the 5 beach profile survey transects. The combined measured/hindcast time-series was transformed to these five specific locations using the nearshore wave model SWAN. Refer to the ReadMe file for full descriptions of the data sources, transformation and file format.
DOI: 10.5061/dryad.28g01/8
title: Narrabeen Astronomical Tide

description: Astronomical Tides over the same time period as the combined wave data (i.e., January 1979 – October 2014) have been derived at 15 minute intervals using the T_Tide tidal analysis package based on available water-level data (1987 and 2012) at the nearby HMAS Penguin tide gauge. Absolute tidal anomalies due to short-term atmospheric and oceanographic fluctuations based on this tidal analysis are found to be limited to 0.19 m for 95% of the time and 0.26 m for 99% of the time. Refer ReadMe file for details of file format.
DOI: 10.5061/dryad.2dr33/1
title: BEAST_files

description: BEAST files, including input .xml and final maximum clade credibility tree.
DOI: 10.5061/dryad.2dr33/10
title: Chaetophractus_villosus_SeqData_Filtered_Collapsed.fastq

description: FASTQ file containing filtered, de-mulitplexed, and collapsed MiSeq (Illumina) sequencing reads corresponding to the Chaetophractus villosus enriched genomic library. See main publication for full details on data processing.
DOI: 10.5061/dryad.2dr33/2
title: RAxML_files

description: RAxML files, including input alignment & partition file and final tree.
DOI: 10.5061/dryad.2dr33/3
title: PartitionFinder_files

description: Input & output from PartitionFinder analyses.
DOI: 10.5061/dryad.2dr33/5
title: MrBayes_files

description: MrBayes files, including input .nex and final tree.
DOI: 10.5061/dryad.2dr33/6
title: PAUP_files

description: PAUP* files, including input .nex and tree files.
DOI: 10.5061/dryad.2dr33/7
title: Doedicurus_sp._SeqData_Filtered_Collapsed.fastq

description: FASTQ file containing filtered, de-mulitplexed, and collapsed MiSeq (Illumina) sequencing reads corresponding to the Doedicurus sp. enriched genomic library. See main publication for full details on data processing.
DOI: 10.5061/dryad.2dr33/8
title: Zaedyus_pichiy_SeqData_Filtered_Collapsed.fastq

description: FASTQ file containing filtered, de-mulitplexed, and collapsed MiSeq (Illumina) sequencing reads corresponding to the Zaedyus pichiy enriched genomic library. See main publication for full details on data processing.
DOI: 10.5061/dryad.2dr33/9
title: Tolypeutes_matacus_SeqData_Filtered_Collapsed.fastq

description: FASTQ file containing filtered, de-mulitplexed, and collapsed MiSeq (Illumina) sequencing reads corresponding to the Tolypeutes matacus enriched genomic library. See main publication for full details on data processing.
DOI: 10.5061/dryad.3h6r1/1
title: 56812 (Wilson-Aggarwal et al)

description: Data for ground nesting birds in Zambia (nightjars, plovers and coursers), collected in the field. The data Includes species, nest code, escape distances, visit number, decimal hour (time of day), clutch size, mean egg volume and camouflage metrics. The document includes separate tabs for plover and courser egg camouflage, nightjar egg camouflage and nightjar adult camouflage. In addition there are tabs for the different predator visual systems.
DOI: 10.5061/dryad.4k2t3/1
title: genetic database

description: Genotypes of all great spotted cuckoos that have been sampled at the two study sites.
DOI: 10.5061/dryad.4k2t3/2
title: parasitism rate

description: Parasitism by great spotted cuckoo (0 = non parasitized nest; 1 = parasitized nest) on magpies (M) and crows (C), at the two studied populations (GR = Guadix, LE = Sobarriba). "Nest" idenitfy territory identity within this file.