cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/j7hp5tmcr7
title: Extreme Temperature and Dew Point Events in North America

description: This dataset is the compilation of four different seasonally-relative extreme events for North America: extreme warm events (XWEs), extreme cold events (XCEs), extreme humid events (XHEs), and extreme dry events (XDEs). Each of these extreme events are calculated on a daily basis from 1979-2016 for 18,661 locations in North America. All extremes are relative to the time of year - essentially a seasonal curve of the 95th and 5th percentiles of the data at each location were created, and days that had 2-meter temperatures (or 2-meter dew points) that were &gt;95th percentile were deemed XWEs (or XHEs for dew points), and days that were &lt;5th percentile were considered XCEs (or XDEs for dew points). The article detailing the development of this dataset is: Lee, CC, Obarein O, Sheridan SC, Smith ET, Adams R. 2020. Examining trends in multiple parameters of seasonally-relative extreme temperature and dew point events across North America (Manuscript currently in peer review). Each dataset is organized as follows: The first two rows are column headers showing the latitude and longitude of the 18,661 land-based gridpoints (from the North American Regional Reanalysis dataset) in the study domain (23°N to 83°N, 46°W to 167°W). The first three columns are row headers showing date information (year, month, and day) for each day in the study period. The rest of the data are binaries (0 or 1) signifying whether each day is an extreme event day (1) or not an extreme event day (0) for each location. The four datasets (one for each type of extreme event) are in a single compressed (.zip) folder and each dataset/file is in comma separated value format (uncompressed size of each file is approximately 506MB). The research leading to the development of this dataset was supported by federal award number NA17OAR4310159, entitled “Developing extreme event climate change indicators related to human thermal comfort” from the National Oceanic and Atmospheric Administration’s Climate Program Office.
DOI: 10.6084/m9.figshare.28683020.v1
title: Supplementary Material for: LKM immunofluorescence is associated with DILI, especially after metamizole intake

description: Background & Aims: 
Drug induced liver injury (DILI) is a rare but potentially serious clinical condition. One phenotype of DILI is termed drug-induced autoimmune like hepatitis (DI-ALH) that presents with laboratory and histological features indistinguishable from autoimmune hepatitis. Liver kidney microsomal antibodies (LKM-antibodies) are common in the diagnosis of AIH but were also described to be associated with halothane-induced DILI. Also, the antigens of anti-LKM-1 and anti-LKM-2 belong to the cytochrome P450 enzyme family that is involved in metabolism various drugs. Therefore, we aimed to study the impact of LKM-antibodies in the diagnostic work-up of suspected DILI in a large cohort of patients with liver injury in a tertiary care centre. 
Methods:
We screened a large single centre hospital data base and retrospectively identified 63.300 cases with liver injury as defined: AST or ALT &gt; 3 ULN or AP or TBI &gt; 2 ULN. Of those, 82 cases with LKM immunofluorescence positivity (titre ≥ 1: 160) were identified, of which 64 patients fulfilled the inclusion criteria for this study.
Results:
Positive LKM immunofluorescence was associated with drug-induced autoimmune-like hepatitis (DI-ALH). Metamizole association was identified in half of the patients (n=33, 52%). Eight patients with metamizole associated DI-ALHs required liver transplantation and one patient died. 
Conclusion: 
DI-ALH, especially after metamizole administration, can be a reason for a positivity in LKM immunofluorescence tests. Metamizole DI-ALH has a high liver-related mortality.
DOI: 10.17632/stfw4w4vjh
title: Evidence for increased SARS-CoV-2 susceptibility and COVID-19 severity related to specific pre-existing immunity to seasonal coronaviruses. Wratil et al.

description: Pseudonymized patient record data and raw data from serum antibody measurements in patients with COVID-19 and pre-pandemic donors.
DOI: 10.6084/m9.figshare.12721724.v6
title: Tropomi NO2 averages in CONUS for COVID-19 paper

description: Intermediary data needed to generate the Figures in Goldberg et al. (2020)<br>Figure1*.zip contains the Tropomi NO2 CONUS averages (QA&gt;0.75) for: -Each month during 2019-Each wind speed bin (&lt;2 m/s, 2-4 m/s, 4-6 m/s, 6-8 m/s, and &gt;8 m/s)-Each wind direction bin (SW, NW, NE, SE)<br>Figure2.zip contains the Tropomi NO2 CONUS averages (QA&gt;0.75) for March 15 - April 30 during 2019 and 2020<br>Figure3.zip contains the:-28-day Tropomi NO2 averages (QA&gt;0.75) for 2019 and 2020 in each city-28-day Tropomi NO2 averages (QA&gt;0.75) for 2019 and 2020 in each city after normalized for meteorology-The daily normalization factors for 2019 and 2020 used to convert the Tropomi NO2 averages into normalized averages<br>Figure4.zip contains the:-28-day Tropomi NO2 averages (QA&gt;0.75) in each city using the actual and inferred "model" values<br>Also included are the center latitudes & longitudes of the 0.01 x 0.01 degree boxes (LatLon.ncf), and the latitudes & longitudes of the 20 North America including box width (LatLon_cities.csv).<br>
DOI: 10.6084/m9.figshare.17066327.v1
title: Soil denitrification rates are more sensitive to hydrological changes than restoration approaches in a unique riparian zone

description: Soil denitrification rates are more sensitive to hydrological changes than restoration approaches in a unique riparian zone
DOI: 10.17632/7kjkf8by5d
title: Dataset of foraminiferal sedimentary DNA (sedDNA) sequences from Svalbard.

description: The data presents foraminiferal diversity and spatial variability inferred from SSU rDNA sequences. Surface sediment samples were collected at 15 sampling stations located in the Svalbard archipelago. Sampling stations were located in the glaciated fjords (Isfjorden, Wijdefjorden, and Rijpfjorden) and in the vicinity of large tidewater glaciers (Nordaustlandet, Edgeoya). Foraminiferal sedimentary DNA (sedDNA) was analyzed in four sediment size fractions: &gt; 500 µm, 500-100 µm, 100-63µm and &lt; 63 µm. The total DNA was extracted from sediments, foraminifer-specific DNA fragments were amplified and sequenced using Illumina technology. Sequences are clustered into the Operational Taxonomic Units (OTUs), and for each OTU, a number of sequence reads are presented. This data provides the first insight into the genetic diversity of Arctic foraminifer in different sediment size fractions. The data is of interest to researchers in a field of metagenomic studies, including biomonitoring, biodiversity surveys, and environmental impact assessments. Moreover, it may be used as a reference in paleoenvironmental and paleoclimatic studies.
DOI: 10.17632/gw57zv5gdc
title: AI assisted Self-regulated Second Language Learning

description: The AI assisted self-regulated Second Language Learning Scale datasets contains junior high school data and senior high school data. The AMOS files contain first and second-order CFA models
DOI: 10.6084/m9.figshare.c.3697123_d1.v1
title: Additional file 1: of A record of the upper Olduvai geomagnetic polarity transition from a sediment core in southern Yokohama City, Pacific side of central Japan

description: Table A1. Results from Core M. Natural remanent magnetizations (NRM), characteristic remanent magnetization (ChRM) declinations and inclinations, maximum angular dispersions (MAD), relative paleointensities (NRM20–40 mT/ARM20–40 mT), volume magnetic susceptibilities (κ), and anhysteretic remanent magnetization susceptibilities (κARM). (XLSX 61 kb)
DOI: 10.17632/vz6krysd36
title: Data for Residual Stress in I6 Engine Blocks

description: This data set includes all of the raw data required to process the residual stress in the I6 engine blocks
DOI: 10.6084/m9.figshare.19188641.v1
title: Aedes mosquitoes biting time Database

description: Database
DOI: 10.6084/m9.figshare.27853809.v1
title: Supplementary Material for: The saNeuroGut Initiative: Investigating the gut microbiome and symptoms of anxiety, depression and posttraumatic stress

description: Introduction: Common mental disorders, such as anxiety disorders, depression, and posttraumatic stress disorder (PTSD), present a substantial health and economic burden. The gut microbiome has been associated with these psychiatric disorders via the microbiome-gut-brain axis. However, previous studies have focused on the associations between the gut microbiome and common mental disorders in European, North American and Asian populations. As part of the saNeuroGut Initiative, we assessed associations between gut microbial composition and self-reported symptoms of anxiety, depression and posttraumatic stress among South African adults.
Methods: Participants completed validated, online self-report questionnaires to evaluate symptoms of state anxiety, trait anxiety, depression, and PTSD. Eighty-six stool-derived microbial DNA samples underwent sequencing of the V4 region of the 16S rRNA gene to characterise gut bacterial taxa in the sample.
Results: No significant associations were observed between symptom severity scores and alpha (Shannon and Simpson indices) and beta (Aitchison distances) diversity metrics. Linear regression models revealed that the abundances of Catenibacterium, Collinsella and Holdemanella were significantly positively associated with the severity of posttraumatic stress (PTS) symptoms.
Conclusion: Catenibacterium, Collinsella and Holdemanella have each previously been associated with various psychiatric disorders, with Catenibacterium having been positively associated with symptoms of PTSD in another South African cohort. This study sheds light on the relationship between the human gut microbiome and symptoms of anxiety, depression, and PTS in a South African adult sample.
DOI: 10.17632/3j84yp5ymb
title: Data for: Activation of FLiBe Coolant in the Molten Salt Reactor
DOI: 10.17632/ffg96sdbd7
title: A comparison of time and frequency domain-based approaches to laser Doppler vibrometer instrumentvibration correction - Dataset

description: This is the dataset used in the Journal of Sound and Vibration paper titled "A comparison of time and frequency domain-based approaches to laser Doppler vibrometer instrument vibration correction".
DOI: 10.6084/m9.figshare.19130819.v1
title: Dataset 11_3.csv

description: Experimental data on reflection curve for sample #10 at the working wavelength
DOI: 10.17632/fdnrn8br54
title: Single cell transcriptome analysis of human embryonic stem cell-derived neurons spanning the rostrocaudal and dorsoventral axes

description: Our inability to derive the neuronal diversity that comprises the posterior central nervous system (pCNS) using human pluripotent stem cells (hPSCs) poses an impediment to understanding human neurodevelopment and disease in the hindbrain and spinal cord. We established a modular, monolayer differentiation paradigm that recapitulates both rostrocaudal (R/C) and dorsoventral (D/V) patterning, enabling derivation of diverse pCNS neurons with discrete regional specificity. Expansive single-cell RNA-sequencing (scRNAseq) analysis coupled with a novel computational pipeline allowed us to detect hundreds of transcriptional markers within region-specific phenotypes, enabling discovery of gene expression patterns across R/C and D/V developmental axes.

Processed data matrix: For each of the 6 samples from direct differentiation (GSE186696) and 14 samples from modular differentiation (GSE186697), We merged the gene expression matrices from each sample into a single matrix while taking the union of the genes from each matrix. The combined matrix is [12,543 cells x 20,598 genes] for the direct differentiation dataset and [49,959 cells x 23,941 genes] for the multiple generation dataset. We transformed the values of these matrices by taking their square root and standardizing each cell’s expression profile by dividing by the mean expression of a gene in each cell for the subsequent clustering analysis.

Clusters - HOX profile clusters: We applied Louvain clustering (k=13) for the visualization of the simultaneous expression of HOX genes in our data set (GSE186697), which revealed inter- and intra-sample HOX profile heterogeneity.

Clusters - primary clusters: We applied sparse non-negative matrix factorization (NMF) (Kim and Park, 2008) based clustering to define cardinal cell groups within our data set (GSE186697) in an unbiased manner and identified 25 primary clusters.

Clusters - subpopulation subclusters: We organized related primary clusters into 17 different groups, and then developed and applied a consensus clustering based approach with the goal of defining robust subclusters representing subtypes of known cardinal populations.

Consensus_graph_matrix: We regrouped our 25 primary cell clusters into 17 subgroups based on similarity of the cell types assigned to each cluster, and created a consensus graph of cell co-clustering relationship per subgroup. For every pair of cells in a subgroup, we counted the proportion of times the two cells were in the same cluster (across multiple clustering approaches), and generated a weighed graph of cells with weights corresponding to this proportion.
DOI: 10.21233/sbr7-ka07
title: Yongjiho Lake ostracode surface sample dataset

description: Raw data for the Yongjiho Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.26180/5c5a5fa08bbee
title: Raw fast5s

description: These files contain the raw (pre-basecalling) sequencing reads for the test sets used in the study.
DOI: 10.6084/m9.figshare.7841387.v1
title: Dataset of residential buildings construction, geometry, and performance in climate change scenarios located in Porto, Portugal

description: This dataset comprises the performance, construction, and geometry data of 50 residential buildings located in Porto, Portugal. The geometric data was generated using the EPSAP algorithm (URL http://dx.doi.org/10.1016/j.cad.2013.01.001; http://dx.doi.org/10.1016/j.cad.2013.01.003; http://dx.doi.org/10.1016/j.autcon.2013.06.005); the construction elements physical properties were saved from the EPSAP algorithm database; and, the performance data was obtained using the FPOP algorithm coupled to the simulation engine EnergyPlus v9.0.1 (URL http://dx.doi.org/10.1016/j.enbuild.2014.06.016; http://dx.doi.org/10.1016/j.apenergy.2014.06.068).
DOI: 10.17632/zftxt2p8b6
title: Supplementary Dataset on Scientometrics of Composite Risers

description: This dataset on the scientometrics of composite risers is presented. It shows supplementary Data that includes keywords, word clouds and retrieved data from SCOPUS and Web of Science databases. This dataset was used for the paper by applying Scientometric science, which is based on bibliometric analysis. VOS viewer was used for establishing research patterns, visualising maps and identifying transcendental issues on composite risers. The data on composite risers were also included, as the data were subjected to a scientometric study which looked at different parameters like publication authors, and publication's geographical location by country to investigate the research pattern. See the full paper in: Amaechi, C.V., et al. (2022). A scientometric review on mapping research knowledge for composite marine risers. JNGSE 2022, under review.
DOI: 10.17632/f9yychj92s
title: Late Quaternary hydroclimate variability in Madagascar and its connection atmospheric circulation patterns

description: The dataset contains bulk geochemical data (δ¹³Corg, TOC, TN and C/N), n-alkane abundances and their hydrogen isotope composition as well as percentages of pollen groups in a sediment core taken from the Central Highlands of Madagascar. The data are used to interpret past climate conditions in the tropical region of SE Africa , particularly hydrclimate changes in Madagascar, which relate to atmospheric circulation patterns. The data covers the period from 26.0000  before present to present.

Data are provided in one spreadsheet (xlsx) file with four tabs containing:
Bulk geochemistry data (δ¹³Corg, Total Organic Carbon (TOC), Total Nitrogen (TN), C/N ratio) against core depth and age.
Leaf wax alkane abundances (C23, C25 C27, C29, C31, C33) against depth and age.
Leaf wax hydrogen isotope data with standard deviations (δD17, δD19, δD21, δD23, δD25 δD27, δD29, δD31,δD33) against depth and age.
Percentages of pollen group (Ericaceae, Poaceae, Cyperaceae, Other tree and shrubs, Other herbs, Ferns, Aquatic plant, Fungii, Algae) against depth and age.
DOI: 10.6084/m9.figshare.14376365.v1
title: Mylopharyngodon_piceus_genome

description: Black carp (Mylopharyngodon piceus, family Cyprinidae) is among the Four Domesticated Fishes in China, which has been cultured more than one thousand years and is characterized with its fast growth and delicious taste. The Black Carp, native to eastern Asia, is a large (&gt;1.5 m long), commercially important fish. To date, previous studies on the black carp have mainly focused on the fields of artificial culture, nutrition and feed, and disease prevention and control . Although some findings on the black carp transcriptome analysis are contained , there is a lack of basic genomics research data.
DOI: 10.6084/m9.figshare.16553058.v1
title: Supplementary Material for: Clinical Implementation and Initial Experience of Neutrophil Gelatinase-Associated Lipocalin Testing for the Diagnostic and Prognostic Assessment of Acute Kidney Injury Events in Hospitalized Patients

description: <b><i>Introduction:</i></b> The use of novel kidney injury biomarkers has been shown to improve diagnostic assessment and prognostic prediction in various populations with acute kidney injury (AKI), but their use in a standard clinical practice have been rarely reported. <b><i>Methods:</i></b> We reported the clinical implementation of neutrophil gelatinase-associated lipocalin (NGAL) measurement for routine AKI diagnostic workup of patients receiving nephrology consultation in a tertiary academic centre. Specific focus was made on the diagnostic performance to discriminate functional (“pre-renal”) from intra-renal AKI and to predict AKI progression. <b><i>Results:</i></b> Forty-five urine NGAL (uNGAL) and 25 plasma NGAL (pNGAL) samples in the first 50 consecutive patients were analysed. KDIGO Stage 1, 2, 3 AKI, and renal replacement therapy occurred in 10%, 40%, 50%, and 24% of cases, respectively. The uNGAL was lower in patients with transient AKI (&lt;48 h) and no sign of urinary tract infections (37 [25–167] ng/mL) than sustained or progressive AKI (298 [74–1,308] ng/mL) (<i>p</i> = 0.016), while pNGAL did not discriminate transient (264 [100–373] ng/mL) from persistent AKI (415 [220–816] ng/mL) (<i>p</i> = 0.137). The median uNGAL level was 63 (35–1,123) ng/mL for functional/pre-renal AKI and 451 (177–1,315) ng/mL for intra-renal AKI (<i>p</i> = 0.043), while the pNGAL was 264 (114–468) and 415 (230–816) ng/mL (<i>p</i> = 0.235), respectively. <b><i>Conclusion:</i></b> NGAL, as part of the routine workup, is useful for diagnostic and prognostic assessment of new-onset AKI in clinical practice. Interpretation of an increased NGAL level should be clinically evaluated in its clinical context, particularly considering concomitant infection (urinary or systemic). Clinical adoption of emerging AKI biomarkers as diagnostic tests in clinical practice should be further encouraged.
DOI: 10.17632/2s3hkt642m
title: Data for: A Randomized Single-Blinded Trial of Early Rehabilitation versus Immobilization after Reverse Total Shoulder Arthroplasty

description: Processed datasheet
DOI: 10.17632/hgx23tsydx
title: Data for: Differential Evolution Particle Filtering Channel Estimation for Non-line-of-sight Wireless Ultraviolet Communication

description: This datas are all results of research about channel estimation in wireless ultraviolet communication.
DOI: 10.6084/m9.figshare.106628.v1
title: Gaussian Job Archive for C12H14Cl2N2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.28877087.v1
title: species genetic information data from NCBI

description: The species genetic information data from NCBI
DOI: 10.17632/4ztpjhtznm
title: Raw Experimental Data (Fiber-reinforced Cemented Paste Backfill)

description: In this database, the authors shared the raw experimental data associated with the article: Effect of curing temperature on time-dependent shear behavior and properties of polypropylene fiber-reinforced cemented paste backfill.
DOI: 10.17632/cckx4yc66m
title: green exercise vs. indoor exercise for performance and well-being - Meta-analysis data

description: The data file includes outcome data from nature-based and indoor exercise intervention studies. Outcomes include performance-related measures (running speed, time to completion, repetitions, etc.) and well-being related measures (affect, tension, stress, etc.).
DOI: 10.6084/m9.figshare.22555459.v1
title: ResNet152-ImageNet distances between 90000 points up to 30 neighbours

description: Distances between 90000 points of the ImageNet dataset, up to 30 neighbours and for several layers of a trained ResNet-152 architecture.
DOI: 10.17632/4rwmrc9cpr
title: Mrugala et al. 2022

description: Raw Data and Excel file of Bulk RNA-sequencing with 1h /24h Control vs 10 µM DXO treated mouse islets
DOI: 10.17605/osf.io/49t2d
title: INSTRUMENTOS DE MENSURAÇÃO DE ESTADOS EMOCIONAIS PARA ESTUDANTES DE MEDICINA: UMA REVISÃO DE ESCOPO

description: O presente trabalho trata-se de uma revisão de escopo da literatura, construída com base no fluxograma proposto pelo PRISMA-ScR (Principais Itens para Relatar Revisões Sistemáticas e Meta-Análises) para Revisões de Escopo. No caso, o tema abordado são os instrumentos de mensuração de alterações emocionais para estudantes de medicina, aplicados durante atividades da sua graduação. Por isso, uma revisão de escopo faz-se necessária para examinar a escala do fenômeno e resumir estudos preliminares que possam subsidiar pesquisas posteriores. A literatura registra a existência de instrumentos validados para aferir alterações emocionais em acadêmicos de medicina. Diante dessas considerações para nortear a pesquisa, lançou-se a questão (estratégia PCC): Qual o panorama da verificação de condições, estados e alterações emocionais de acadêmicos de medicina, avaliados durante as atividades de sua graduação, na atualidade?
DOI: 10.17632/czd4mxh5fp
title: Tear Gas Table 1

description: Characteristics of included studies
DOI: 10.17632/krdy6nbgnf
title: LINF_130005800

description: Carboxypeptidase | CP1; Leishmania infantum (strain JPCM5)
DOI: 10.17632/p5h576s247
title: Dynamic Modeling and Simulation of Interconnected Microgrids 

description: This data package includes three useful files related with dynamic modeling, stability analysis and simulation of interconnected microgrids.
1) A high-resolution figure of interconnected microgrids with details simulated in MATLAB/SimPowerSystems.
2) A MATLAB m file of the small-signal model of the islanded microgrid with two droop-based (grid-forming) and one PQ-controlled (grid-feeding) DERs in which small-signal stability analysis can be done. 
3) A MATLAB slx file of an islanded microgrid with two droop-based (grid-forming) and one PQ-controlled (grid-feeding) DERs, which is a fundamental module of interconnected microgrids for their simulations, transient stability analysis, and verification of designed controllers. 

The MATLAB m file is independent and can easily be run. However, required parameters of the slx file are provided in the m file. Therefore, running m file before executing simulation in slx file is necessary for a successful simulation.