cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc25m1rm
title: CCDC 2014310: Experimental Crystal Structure Determination

description: Related Article: Nichabhat Diteepeng, Isobel A. P. Wilson, Jean-Charles Buffet, Zoë R. Turner, Dermot O'Hare|2020|Polym.Chem.|11|6308|doi:10.1039/D0PY00980F
DOI: 10.5517/ccdc.csd.cc25m1sn
title: CCDC 2014311: Experimental Crystal Structure Determination

description: Related Article: Nichabhat Diteepeng, Isobel A. P. Wilson, Jean-Charles Buffet, Zoë R. Turner, Dermot O'Hare|2020|Polym.Chem.|11|6308|doi:10.1039/D0PY00980F
DOI: 10.17037/data.00001902
title: Influenza clinical risk groups 2017 version - Chronic respiratory disease (not asthma)

description: Read v2 codes for diagnoses of long-term respiratory conditions as an indication for influenza vaccination, excluding asthma, but including chronic obstructive pulmonary disease (COPD); chronic bronchitis and emphysema; bronchiectasis, cystic fibrosis, interstitial lung fibrosis, pneumoconiosis and bronchopulmonary dysplasia (BPD). Definition designed to follow national guidance in indications for influenza vaccination https://www.gov.uk/government/publications/influenza-the-green-book-chapter-19
DOI: 10.21335/nmdc-nersc-758932911
title: CTD data collected in Storfjorden, Svalbard, during the UAK 2020 Cruise

description: CTD data collected in Storfjorden, Svalbard, during the UAK 2020 Research School with KV Svalbard. Data collected for two sections in Storfjorden, one along-fjord section from the mouth towards the head of the fjord, and one cross-section along its sill. Data averaged and interpolated to 1 m intervals, and manually reviewed.
DOI: 10.6084/m9.figshare.11497128
title: A frameshift mutations are repaired through nonsense-mediated gene revising in E. coli

description: <b>S1</b>: the list of SNPs in the genomes;<b>S2</b>: the list of raw SNPs in the plasmid; <b>S3</b>: the read count and FPKM for all genes;<b>S4</b>: the list of DEGs; <b>S5</b>: the list of enriched KEGG pathways; <b>S6</b>: the list of genes annotated in the duplicate region; <b>S7</b>: the list of structure variations;<b>S8</b>: the list of peptides identified in the proteomes. <br>
DOI: 10.6084/m9.figshare.11497128.v5
title: A frameshift mutations are repaired through nonsense-mediated gene revising in E. coli

description: <b>S1</b>: the list of SNPs in the genomes;<b>S2</b>: the list of raw SNPs in the plasmid; <b>S3</b>: the read count and FPKM for all genes;<b>S4</b>: the list of DEGs; <b>S5</b>: the list of enriched KEGG pathways; <b>S6</b>: the list of genes annotated in the duplicate region; <b>S7</b>: the list of structure variations;<b>S8</b>: the list of peptides identified in the proteomes. <br>
DOI: 10.6084/m9.figshare.11497128.v4
title: Frameshift mutations are repaired through nonsense-mediated gene revising in E. coli

description: <b>S1</b>: the list of SNPs in the genomes;<b>S2</b>: the list of SNPs in the plasmid; <b>S3</b>: the read count and FPKM for all genes;<b>S4</b>: the list of DEGs; <b>S5</b>: the list of enriched KEGG pathways; <b>S6</b>: the list of genes annotated in the duplicate region; <b>S7</b>: the list of structure variations;<b>S8</b>: the list of peptides identified in the proteomes. <br>
DOI: 10.6084/m9.figshare.13108346
title: complete_dataset_h_cleaned.csv

description: This dataset has five columns: device, tower, activity, stream and algorithm. The first is the hashed phone number of the 65 participants in the study, tower is the "identified" cell, activity is the number of events at that particular tower using "stream" (CDR, XDR, and CPR) and algorithm HDA1 through HDA5 as described in Vanhoof (2018).
DOI: 10.6084/m9.figshare.13108349
title: ground_truth_dataset_h.csv

description: This dataset contains four fields: "device", "closest_tower", "2nd_closest_tower", and "3rd_closest_tower". They are, for each of 65 participants, the k=3 nearest towers as recognized by a k-nearest neighbor algorithm over haversine distance. <br>
DOI: 10.6084/m9.figshare.13108349.v1
title: ground_truth_dataset_h.csv

description: This dataset contains four fields: "device", "closest_tower", "2nd_closest_tower", and "3rd_closest_tower". They are, for each of 65 participants, the k=3 nearest towers as recognized by a k-nearest neighbor algorithm over haversine distance. <br>
DOI: 10.6084/m9.figshare.12264497.v1
title: Supplementary data for Abdel-Glil M et al. (Manuscript 2020)

description: File Descriptions: Data set 1: Detailed reports on the de novo genome assembly for PacBio sequence data of 23 NCTC <i>Clostridium perfringens</i> strains.<br> Data set 2: (A) Alignment of the deduced AA sequence of the collagenase gene (<i>colA</i>) of 75 <i>Clostridium perfringens</i>. (B) Visualisation of a large deletion of the <i>colA</i> gene in strain CBA7123 (bottom) compared to <i>colA</i> gene in strain 13 (top). (C) FASTA_Alignment of the <i>colA</i> genes of 75 <i>C. perfringens</i> strains.<br> Data set 3: (A) RAST Annotation of the NCTC_8081_plasmid with highlighted <i>cpe</i>, <i>tcp</i> locus and the new toxin homolog. (B) Phylogenetic tree based on the deduced amino acid sequences of representative members of Leukocidin/Hemolysin superfamily and the homolog (locus tag 02938) of the Darmbrand NCTC 8081 strain. <br>Data set 4: (A) Phylogenetic tree based on the deduced amino acid sequences of the <i>pfoA</i> gene and the <i>pfoA</i> like sequence in the strain JP838. Representative members of the cytolysin family were included. (B) Protein alignment of the <i>pfoA</i> gene (top) and the <i>pfoA</i> like sequence (bottom) in strain JP838. (C) FASTA nucleotide alignment of <i>pfoA</i> gene and the <i>pfoA</i> like sequence in strain JP838. <br>Data set 5: The folder includes FASTA sequences and the prokka annotation of the analysed 76 <i>C. perfringens</i> strains, as well as the RAST annotation of the 30 circularized genomes. <br>Data set 6: Sequences of core genes identified using the three different algorithms of GET_HOMOLOGUES. <br>Data set 7: Gene sequences comprising the pangenome of the 76 strains as calculated with Roary.<br>
DOI: 10.17037/data.00001899
title: Clinical code list - Weight loss

description: Clinical code list on weight loss
DOI: 10.21227/v2a4-2f73
title: Flotation froth sequence images

description: This dataset is flotation froth sequence images, a total of 2386 folders, that is, 2386 groups of froth sequence images. The data comes from a mine in southern China, and the digital camera collected the froth videos every 5 minutes during the period from 2019.08.01 to 2019.12.01. Each group of froth sequence images contains 12 consecutive frames and the sampling time is 0.4s. This dataset is suitable for image processing, pattern recognition, and artificial intelligence.
DOI: 10.21227/tkr3-4s69
title: Flotation froth sequence images

description: This dataset is flotation froth sequence images, a total of 2386 folders, that is, 2386 groups of froth sequence images. The data comes from a mine in southern China, and the digital camera collected the froth videos every 5 minutes during the period from 2019.08.01 to 2019.12.01. Each group of froth sequence images contains 12 consecutive frames and the sampling time is 0.4s. This dataset is suitable for image processing, pattern recognition, and artificial intelligence.
DOI: 10.17037/data.00001901
title: Clinical code list - Fatigue

description: Clinical code list on Fatigue
DOI: 10.6084/m9.figshare.10259426.v2
title: The Last Glacial and Holocene history of mountain woodlands in the southern part of the Western Carpathians, with emphasis on the spread of <i>Fagus sylvatica</i>

description: The Western Carpathians have recently been examined in several palaeoecological studies. However, some of their parts remain underexplored in terms of the Holocene history of mountain woodlands. We analysed an 8000-year-old peat sequence from the southern part of the Western Carpathians (the Bykovo site) for pollen, needles and stomata, and reviewed the data on the occurrence and spread of beech since the Last Glacial times in order to put results from Bykovo into the context of the whole Western Carpathians. For pre-industrial times, we reconstructed mixed beech–fir or beech–fir–spruce woodlands in zonal habitats, noble hardwood woodlands on screes, and spruce woodlands in peaty and wet habitats. A meta-analysis of available pollen data for beech revealed that a few sites in Pannonia and on the southern Carpathian fringes reached beech pollen abundances exceeding 0.5% at the very beginning of the Holocene (12–10 cal BP). Moreover, the pattern of reaching greater pollen abundance limits showed a clear south-to-north gradient starting in the Pannonian lowland. Therefore, the direction of the spread of beech based on pollen abundances and the absence of beech macrofossil evidence during the Last Glacial Maximum do not support local glacial refugia of beech directly in the Western Carpathians. The timing of local beech occurrence (empirical pollen limit of 1.4–2%) and its expansion (rational pollen limit of up to 5%) at the Bykovo site fits well this gradual spread of beech from the south. The first period of beech spread in the Bykovo area around 6250 cal BP coincides well with the period of increased precipitation between 6100 and 6800 cal BP, as reconstructed by different proxies (e.g. stable isotopes) for the Western Carpathians.
DOI: 10.6084/m9.figshare.9976247
title: Pollen morphology of tribes Alsineae and Sperguleae (Caryophyllaceae) and its systematic significance

description: Pollen morphology of 79 species, one subspecies and eight varieties representing nine genera of tribe Alsineae and two of tribe Sperguleae was studied using light microscopy (LM) and scanning electron microscopy (SEM). Among them, 53 species and eight varieties (22 species of which are endemic to China) were reported for the first time. The results demonstrate that the number of pores, the pollen surface ornamentation and the density of microechini have important systematic significance. The surface ornamentation can be divided into three types, namely microechinate-perforate, microechinate-punctate, and microechinate-punctate-perforate. Pollen characteristics support: (i) isolation of <i>Arenaria</i> subgenus <i>Odontostemma</i> from <i>Arenaria</i> and reclassification of <i>Arenaria</i> subgenus <i>Odontostemma</i> to <i>Odontostemma</i>; (ii) isolation of <i>Cerastium</i> subgenus <i>Dichodon</i> from <i>Cerastium</i> and reclassification of <i>Cerastium</i> subgenus <i>Dichodon</i> to <i>Dichodon</i>; (iii) isolation of <i>Minuartia</i> subgenus <i>Rhodalsine</i> from <i>Minuartia</i> and reclassification of <i>Minuartia</i> subgenus <i>Rhodalsine</i> to <i>Rhodalsine</i>; (iv) isolation of <i>Rhodalsine</i> from tribe Alsineae and reclassification of <i>Rhodalsine</i> into tribe Sperguleae; and (v) isolation of <i>Sagina</i> from tribe Alsineae. In addition, the relationships of <i>Arenaria</i> subgenus <i>Eremogone</i> and <i>Arenaria</i> subgenus <i>Eremogoneastrum</i> to tribe Alsineae need to be further studied. Furthermore, pollen characteristics indicate that tribe Alsineae is more evolved than tribe Sperguleae.
DOI: 10.6084/m9.figshare.10259426
title: The Last Glacial and Holocene history of mountain woodlands in the southern part of the Western Carpathians, with emphasis on the spread of <i>Fagus sylvatica</i>

description: The Western Carpathians have recently been examined in several palaeoecological studies. However, some of their parts remain underexplored in terms of the Holocene history of mountain woodlands. We analysed an 8000-year-old peat sequence from the southern part of the Western Carpathians (the Bykovo site) for pollen, needles and stomata, and reviewed the data on the occurrence and spread of beech since the Last Glacial times in order to put results from Bykovo into the context of the whole Western Carpathians. For pre-industrial times, we reconstructed mixed beech–fir or beech–fir–spruce woodlands in zonal habitats, noble hardwood woodlands on screes, and spruce woodlands in peaty and wet habitats. A meta-analysis of available pollen data for beech revealed that a few sites in Pannonia and on the southern Carpathian fringes reached beech pollen abundances exceeding 0.5% at the very beginning of the Holocene (12–10 cal BP). Moreover, the pattern of reaching greater pollen abundance limits showed a clear south-to-north gradient starting in the Pannonian lowland. Therefore, the direction of the spread of beech based on pollen abundances and the absence of beech macrofossil evidence during the Last Glacial Maximum do not support local glacial refugia of beech directly in the Western Carpathians. The timing of local beech occurrence (empirical pollen limit of 1.4–2%) and its expansion (rational pollen limit of up to 5%) at the Bykovo site fits well this gradual spread of beech from the south. The first period of beech spread in the Bykovo area around 6250 cal BP coincides well with the period of increased precipitation between 6100 and 6800 cal BP, as reconstructed by different proxies (e.g. stable isotopes) for the Western Carpathians.
DOI: 10.6084/m9.figshare.11309453
title: Neogene palynostratigraphic zonation of the Maranon Basin, Western Amazonia, Peru

description: The palynology (150 species of pollen grains, 43 species of spores, eight species of dinoflagellate cysts, five genera of algae, two genera of fungal spores, foraminiferal linings, and copepod eggs) of the Neogene succession in the Marañon Basin, north Peru, was thoroughly investigated for the first time from six industrial wells (Arabela-1X, Maynas-1, Tucunare-1X, Tigrillo-30X, Nahuapa-24X, and La Frontera-1). Six palynozones spanning the Early Miocene to the Early Pliocene were defined. The zones in stratigraphically ascending order are as follows: the Mar-A <i>Corsinipollenites oculusnoctis</i> Zone (Aquitanian to early Burdigalian: 23.03–17.71 Ma), delimited by the appearance of <i>Acaciapollenites myriosporites</i>, <i>Retitricolporites wijmstrae</i> and/or <i>Corsinipollenites oculusnoctis</i> and/or the disappearance of <i>Cicatricosisporites dorogensis</i> at the base; the Mar-B <i>Malvacipolloides</i> (<i>Echitricolporites</i>) <i>maristellae</i> Zone (Burdigalian: 17.71–16.1 Ma), from <i>Malvacipolloides maristellae</i> at the base to the disappearance of <i>Retitricolporites wijmstrae</i> at the top; the Mar-C <i>Mauritiidites crassibaculatus</i> Zone (latest Burdigalian to Late Langhian: 16.1–14.2/13.9 Ma), from the appearance of <i>Grimsdalea magnaclavata</i> at the base to the disappearance of <i>Retitriporites dubiosus</i> and/or the appearance of <i>Crassoretitriletes vanraadshooveni</i> and/or <i>Psilastephanoporites tesseroporus</i>; the Mar-D <i>Crassoretitriletes vanraadshooveni</i> Zone (Late Serravallian: 14.2–11.62 Ma), from the appearance of <i>Crassoretitriletes vanraadshooveni</i> and/or <i>Psilastephanoporites tesseroporus</i> to the disappearances of <i>Mauritiidites crassibaculatus</i>, <i>Bombacacidites nacimientoensis</i>, and <i>Cyathidites congoensis</i>; and the Mar-E <i>Psilastephanoporites tesseroporus</i> Zone (Early Tortonian to Late Messinian: 11.62–5.48 Ma) from the disappearance of <i>Corsinipollenites oculusnoctis</i> and/or <i>Cyathidites congoensis</i> to the disappearance of <i>Psilastephanoporites tesseroporus</i> and/or <i>Siltaria santaisabelensis</i>. These zones were corroborated by means of events ordination demonstrated using graphic correlation. The Mar-F <i>Ctenolophonidites suigeneris</i> Zone (latest Messinian to Zanclean) is described only in the Frontera-1 well from the disappearance of <i>Psilastephanoporites tesseroporus</i> to the last record of <i>Ctenolophonidites suigeneris</i> and/or <i>Siltaria hammenii.</i> This study suggests that Pliocene sedimentation is also recorded in the Western Amazonia of Peru, and provides new palynological information compared with the Mio–Pliocene Solimões, Acre, and eastern Amazonas basins.
DOI: 10.6084/m9.figshare.9976247.v1
title: Pollen morphology of tribes Alsineae and Sperguleae (Caryophyllaceae) and its systematic significance

description: Pollen morphology of 79 species, one subspecies and eight varieties representing nine genera of tribe Alsineae and two of tribe Sperguleae was studied using light microscopy (LM) and scanning electron microscopy (SEM). Among them, 53 species and eight varieties (22 species of which are endemic to China) were reported for the first time. The results demonstrate that the number of pores, the pollen surface ornamentation and the density of microechini have important systematic significance. The surface ornamentation can be divided into three types, namely microechinate-perforate, microechinate-punctate, and microechinate-punctate-perforate. Pollen characteristics support: (i) isolation of <i>Arenaria</i> subgenus <i>Odontostemma</i> from <i>Arenaria</i> and reclassification of <i>Arenaria</i> subgenus <i>Odontostemma</i> to <i>Odontostemma</i>; (ii) isolation of <i>Cerastium</i> subgenus <i>Dichodon</i> from <i>Cerastium</i> and reclassification of <i>Cerastium</i> subgenus <i>Dichodon</i> to <i>Dichodon</i>; (iii) isolation of <i>Minuartia</i> subgenus <i>Rhodalsine</i> from <i>Minuartia</i> and reclassification of <i>Minuartia</i> subgenus <i>Rhodalsine</i> to <i>Rhodalsine</i>; (iv) isolation of <i>Rhodalsine</i> from tribe Alsineae and reclassification of <i>Rhodalsine</i> into tribe Sperguleae; and (v) isolation of <i>Sagina</i> from tribe Alsineae. In addition, the relationships of <i>Arenaria</i> subgenus <i>Eremogone</i> and <i>Arenaria</i> subgenus <i>Eremogoneastrum</i> to tribe Alsineae need to be further studied. Furthermore, pollen characteristics indicate that tribe Alsineae is more evolved than tribe Sperguleae.
DOI: 10.6084/m9.figshare.11309453.v1
title: Neogene palynostratigraphic zonation of the Maranon Basin, Western Amazonia, Peru

description: The palynology (150 species of pollen grains, 43 species of spores, eight species of dinoflagellate cysts, five genera of algae, two genera of fungal spores, foraminiferal linings, and copepod eggs) of the Neogene succession in the Marañon Basin, north Peru, was thoroughly investigated for the first time from six industrial wells (Arabela-1X, Maynas-1, Tucunare-1X, Tigrillo-30X, Nahuapa-24X, and La Frontera-1). Six palynozones spanning the Early Miocene to the Early Pliocene were defined. The zones in stratigraphically ascending order are as follows: the Mar-A <i>Corsinipollenites oculusnoctis</i> Zone (Aquitanian to early Burdigalian: 23.03–17.71 Ma), delimited by the appearance of <i>Acaciapollenites myriosporites</i>, <i>Retitricolporites wijmstrae</i> and/or <i>Corsinipollenites oculusnoctis</i> and/or the disappearance of <i>Cicatricosisporites dorogensis</i> at the base; the Mar-B <i>Malvacipolloides</i> (<i>Echitricolporites</i>) <i>maristellae</i> Zone (Burdigalian: 17.71–16.1 Ma), from <i>Malvacipolloides maristellae</i> at the base to the disappearance of <i>Retitricolporites wijmstrae</i> at the top; the Mar-C <i>Mauritiidites crassibaculatus</i> Zone (latest Burdigalian to Late Langhian: 16.1–14.2/13.9 Ma), from the appearance of <i>Grimsdalea magnaclavata</i> at the base to the disappearance of <i>Retitriporites dubiosus</i> and/or the appearance of <i>Crassoretitriletes vanraadshooveni</i> and/or <i>Psilastephanoporites tesseroporus</i>; the Mar-D <i>Crassoretitriletes vanraadshooveni</i> Zone (Late Serravallian: 14.2–11.62 Ma), from the appearance of <i>Crassoretitriletes vanraadshooveni</i> and/or <i>Psilastephanoporites tesseroporus</i> to the disappearances of <i>Mauritiidites crassibaculatus</i>, <i>Bombacacidites nacimientoensis</i>, and <i>Cyathidites congoensis</i>; and the Mar-E <i>Psilastephanoporites tesseroporus</i> Zone (Early Tortonian to Late Messinian: 11.62–5.48 Ma) from the disappearance of <i>Corsinipollenites oculusnoctis</i> and/or <i>Cyathidites congoensis</i> to the disappearance of <i>Psilastephanoporites tesseroporus</i> and/or <i>Siltaria santaisabelensis</i>. These zones were corroborated by means of events ordination demonstrated using graphic correlation. The Mar-F <i>Ctenolophonidites suigeneris</i> Zone (latest Messinian to Zanclean) is described only in the Frontera-1 well from the disappearance of <i>Psilastephanoporites tesseroporus</i> to the last record of <i>Ctenolophonidites suigeneris</i> and/or <i>Siltaria hammenii.</i> This study suggests that Pliocene sedimentation is also recorded in the Western Amazonia of Peru, and provides new palynological information compared with the Mio–Pliocene Solimões, Acre, and eastern Amazonas basins.
DOI: 10.6084/m9.figshare.8263166.v1
title: The literature on Triassic, Jurassic and earliest Cretaceous dinoflagellate cysts: supplement 4

description: Since the publication of four compilations issued between 2012 and 2019, 93 further published contributions on Triassic, Jurassic and earliest Cretaceous (Berriasian) dinoflagellate cysts from Africa, North America, South America, the Arctic, Australasia, East Europe, West Europe, the Middle East and Russia have been discovered in the literature, or were issued in the last 12 months (i.e. between February 2018 and January 2019). Of these, 55 were published during 2018 and 2019, making this period a very productive one. These studies are mostly on the Late Triassic and Early Jurassic of Europe. All the 93 items are listed herein with digital object identifier (doi) numbers where available, as well as a description of each item as a string of keywords. Publications on West Europe comprise 31.2% of the total, and items on Africa, the Arctic, Australasia, East Europe and Russia are also significant (15.1, 6.5, 7.5, 9.7 and 14.0%, respectively). The least well-represented regions are North America, South America and the Middle East (2.2, 1.1 and 1.1%, respectively).
DOI: 10.6084/m9.figshare.8263166
title: The literature on Triassic, Jurassic and earliest Cretaceous dinoflagellate cysts: supplement 4

description: Since the publication of four compilations issued between 2012 and 2019, 93 further published contributions on Triassic, Jurassic and earliest Cretaceous (Berriasian) dinoflagellate cysts from Africa, North America, South America, the Arctic, Australasia, East Europe, West Europe, the Middle East and Russia have been discovered in the literature, or were issued in the last 12 months (i.e. between February 2018 and January 2019). Of these, 55 were published during 2018 and 2019, making this period a very productive one. These studies are mostly on the Late Triassic and Early Jurassic of Europe. All the 93 items are listed herein with digital object identifier (doi) numbers where available, as well as a description of each item as a string of keywords. Publications on West Europe comprise 31.2% of the total, and items on Africa, the Arctic, Australasia, East Europe and Russia are also significant (15.1, 6.5, 7.5, 9.7 and 14.0%, respectively). The least well-represented regions are North America, South America and the Middle East (2.2, 1.1 and 1.1%, respectively).
DOI: 10.17037/data.00001900
title: Clinical code list - Obesity

description: Read codes for Obesity.
DOI: 10.6084/m9.figshare.13108511
title: R0309_20191117a_videos

description: Rat 0309, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13108511.v2
title: R0309_20191117a_videos

description: Rat 0309, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13108511.v1
title: R0309_20191117a_videos

description: Rat 0309, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.25398/rd.northumbria.12854888
title: Review-of-Toolkits-for-TIPS.xlsx

description: Survey of creative toolkits appendix for DETIPS 2020 paper Helen Collard and Jo Briggs "Creative Toolkits for TIPS" in proceedings of the Interdisciplinary Workshop on Trust, Identity, Privacy, and Security in the Digital Economy (DETIPS 2020)
DOI: 10.6084/m9.figshare.12338585.v2
title: Guay J and Kopp SL PNBs for Hip Fractures in Adults RoB2 20 May 2020.pdf

description: Risks of Bias 2 applied to Cochrane Review Peripheral Nerve Blocks for Hip Fractures in Adults by Joanne Guay and Sandra L Kopp