cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.31273131.v1
title: Additional file 1 of Genomic analysis reveals convergent signatures of selection for milk traits in sheep and goats

description: Additional file 1: Table S1. WGS data information. Table S2. SNP information. Table S3. Statistics on diversity parameters of different goat breeds. Table S4. Statistics on diversity parameters of different sheep breeds. Table S5. The top 1% of candidate genes under selection in goats by FST. Table S6. The top 1% of candidate genes under selection in goats by π ratio. Table S7. Overlapping selection candidate genes in goats by FST and π ratio. Table S8. The top 5% of candidate genes under selection in sheep by FST. Table S9. The top 5% of candidate genes under selection in sheep by π ratio. Table S10. Overlapping selection candidate genes in sheep by FST and π ratio. Table S11. KEGG pathway enrichment of candidate genes selected by FST and π ratio in goats and sheep. Table S12. Description of RNA-seq datasets in goats and sheep. Table S13. Gene expression count matrix of goat RNA-seq data. Table S14. Gene expression TPM Matrix of goat RNA-seq data. Table S15. Goat DESeq2 result of dry period vs. peak lactation. Table S16. Goat DESeq2 result of early vs. late lactation. Table S17. Goat DESeq2 result of early vs. peak lactation. Table S18. Gene expression count matrix of sheep RNA-seq data. Table S19. Gene expression TPM matrix of sheep RNA-seq data. Table S20. Sheep DESeq2 result of dairy vs. non-dairy.
DOI: 10.6084/m9.figshare.31273171
title: Additional file 2 of Mutational landscape and risk estimates of DDR genes in Chinese ovarian cancer patients

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.31273171.v1
title: Additional file 2 of Mutational landscape and risk estimates of DDR genes in Chinese ovarian cancer patients

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30048788
title: Additional file 2 of Global patterns and trends in cancer-related premature death and their impact on life expectancy across 185 countries: a population-based analysis

description: Additional file 2. Table S1 Total cancer deaths, years of life lost (YLLs), and potential gains in life expectancy (PGLEs) by eliminating total cancer-related deaths, by world region, sex, and HDI, 2022. Table S2 Total cancer deaths and premature cancer deaths, by country and sex, 2022. Table S3 Years of life lost (YLLs) and potential gains in life expectancy (PGLEs) caused by total cancer deaths and premature cancer deaths, by country and sex, 2022. Table S4 Years of life lost (YLLs) and potential gains in life expectancy (PGLEs) caused by total cancer deaths and premature cancer deaths worldwide, by cancer site and sex, 2022. Table S5 The proportions (%) of years of life lost (YLLs) attributable to cancer-related premature deaths in 2022, by cancer site, region, and sex [% (95% UI)]. Table S6 The leading cause of years of life lost (YLLs) due to premature cancer deaths, by country and sex, 2022. Table S7 The potential gains in life expectancy (PGLEs) by eliminating premature cancer deaths in 2022, by cancer site, region, and sex (years, 95% UI). Table S8 The leading cause of potential gains in life expectancy (PGLEs) attributable to premature cancer deaths, by country and sex, 2022.
DOI: 10.6084/m9.figshare.30048788.v1
title: Additional file 2 of Global patterns and trends in cancer-related premature death and their impact on life expectancy across 185 countries: a population-based analysis

description: Additional file 2. Table S1 Total cancer deaths, years of life lost (YLLs), and potential gains in life expectancy (PGLEs) by eliminating total cancer-related deaths, by world region, sex, and HDI, 2022. Table S2 Total cancer deaths and premature cancer deaths, by country and sex, 2022. Table S3 Years of life lost (YLLs) and potential gains in life expectancy (PGLEs) caused by total cancer deaths and premature cancer deaths, by country and sex, 2022. Table S4 Years of life lost (YLLs) and potential gains in life expectancy (PGLEs) caused by total cancer deaths and premature cancer deaths worldwide, by cancer site and sex, 2022. Table S5 The proportions (%) of years of life lost (YLLs) attributable to cancer-related premature deaths in 2022, by cancer site, region, and sex [% (95% UI)]. Table S6 The leading cause of years of life lost (YLLs) due to premature cancer deaths, by country and sex, 2022. Table S7 The potential gains in life expectancy (PGLEs) by eliminating premature cancer deaths in 2022, by cancer site, region, and sex (years, 95% UI). Table S8 The leading cause of potential gains in life expectancy (PGLEs) attributable to premature cancer deaths, by country and sex, 2022.
DOI: 10.6084/m9.figshare.31273173
title: Additional file 1 of Tumor-associated macrophages display differential protein cargo sorting in extracellular vesicles associated with poor survival in ovarian cancer

description: Supplementary Material 1: Supplementary Tables
DOI: 10.6084/m9.figshare.31273173.v1
title: Additional file 1 of Tumor-associated macrophages display differential protein cargo sorting in extracellular vesicles associated with poor survival in ovarian cancer

description: Supplementary Material 1: Supplementary Tables
DOI: 10.6084/m9.figshare.31273191
title: Additional file 2 of Cattle manure suppresses methane consumption and enhances denitrification-associated nitrous oxide production in farm dams

description: Additional file 2.
DOI: 10.6084/m9.figshare.31273191.v1
title: Additional file 2 of Cattle manure suppresses methane consumption and enhances denitrification-associated nitrous oxide production in farm dams

description: Additional file 2.
DOI: 10.6084/m9.figshare.31273194
title: Additional file 3 of Cattle manure suppresses methane consumption and enhances denitrification-associated nitrous oxide production in farm dams

description: Additional file 3.
DOI: 10.6084/m9.figshare.31273194.v1
title: Additional file 3 of Cattle manure suppresses methane consumption and enhances denitrification-associated nitrous oxide production in farm dams

description: Additional file 3.
DOI: 10.6084/m9.figshare.31273197
title: Additional file 1 of The genome of Phlebotomus chinensis, the primary vector of visceral leishmaniasis in China: insights from chromosome-level assembly and comparative analysis

description: Additional file 1.
DOI: 10.6084/m9.figshare.31273197.v1
title: Additional file 1 of The genome of Phlebotomus chinensis, the primary vector of visceral leishmaniasis in China: insights from chromosome-level assembly and comparative analysis

description: Additional file 1.
DOI: 10.6084/m9.figshare.31273204
title: Additional file 1 of In silico identification of damaging CDK4 variants linked to cancer pathogenesis: functional and structural insights

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.31273204.v1
title: Additional file 1 of In silico identification of damaging CDK4 variants linked to cancer pathogenesis: functional and structural insights

description: Supplementary Material 1
DOI: 10.15468/dl.fa8vya
title: Occurrence Download

description: A dataset containing 323 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Uvaria microcarpa",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 323 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015760-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31273266.v1
title: Additional file 2 of Birth and death evolution of polyphenol oxidase (PPO) gene family in Oryza species

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273266
title: Additional file 2 of Birth and death evolution of polyphenol oxidase (PPO) gene family in Oryza species

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273267
title: Additional file 1 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.31273267.v1
title: Additional file 1 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.31273270.v1
title: Additional file 2 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273270
title: Additional file 2 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273273
title: Additional file 3 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.31273273.v1
title: Additional file 3 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.31273276
title: Additional file 4 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.31273276.v1
title: Additional file 4 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.31273279
title: Additional file 5 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.31273279.v1
title: Additional file 5 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.31273285
title: Additional file 6 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.31273285.v1
title: Additional file 6 of Blood lipidome profiling reveals potential biomarkers linked to health and carcass quality traits in pigs

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.31273309
title: Additional file 2 of Diel transcriptional dynamics of a marine sponge and its microbiome in a natural environment

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273309.v1
title: Additional file 2 of Diel transcriptional dynamics of a marine sponge and its microbiome in a natural environment

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273293
title: Additional file 5 of The complete genome of Trypanosoma cruzi reveals 32 chromosomes and three genomic compartments

description: Supplementary Material 5.
DOI: 10.6084/m9.figshare.31273293.v1
title: Additional file 5 of The complete genome of Trypanosoma cruzi reveals 32 chromosomes and three genomic compartments

description: Supplementary Material 5.
DOI: 10.6084/m9.figshare.31273296
title: Additional file 6 of The complete genome of Trypanosoma cruzi reveals 32 chromosomes and three genomic compartments

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.31273296.v1
title: Additional file 6 of The complete genome of Trypanosoma cruzi reveals 32 chromosomes and three genomic compartments

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.31273334
title: Additional file 1 of Functionally distinct core microbes of Tricholoma matsutake revealed by cross-study analysis

description: Supplementary Material 1: Supplementary Table S1. Sampling locations and the number of shiro samples collected in this study. Supplementary Table S2. Reanalyzed studies on shiro microbes. Supplementary Table S3. Summary of key studies investigating shiro microbes without publicly available sequence data. Supplementary Table S4. Taxonomic assignment of shiro bacterial sequences. Supplementary Table S5. Taxonomic assignment of shiro fungal sequences. Supplementary Table S6. Shiro core microbial phylotypes. Supplementary Data S7. Niche-specific taxa distinguishing S-soil and NS-soil. Analytical indices include LEfSe scores, ISA values, and co-occurrence index for each study. Supplementary Table S8. S-root- and S-fruitbody- specific taxa detected using LEfSe among S-soil, S-root, and S-fruitbody samples. Supplementary Table S9. Phylotypes representing significant correlation with Tricholoma matsutake (|r| ≥ 0.35). Supplementary Table S10. Predicted enzymatic activities enriched in bacterial communities of different niches. Supplementary Table S11. Predicted metabolic pathways (KEGG) enriched in fungal communities of different niches. Overlapped functions among studies are highlighted in bold.
DOI: 10.6084/m9.figshare.31273334.v1
title: Additional file 1 of Functionally distinct core microbes of Tricholoma matsutake revealed by cross-study analysis

description: Supplementary Material 1: Supplementary Table S1. Sampling locations and the number of shiro samples collected in this study. Supplementary Table S2. Reanalyzed studies on shiro microbes. Supplementary Table S3. Summary of key studies investigating shiro microbes without publicly available sequence data. Supplementary Table S4. Taxonomic assignment of shiro bacterial sequences. Supplementary Table S5. Taxonomic assignment of shiro fungal sequences. Supplementary Table S6. Shiro core microbial phylotypes. Supplementary Data S7. Niche-specific taxa distinguishing S-soil and NS-soil. Analytical indices include LEfSe scores, ISA values, and co-occurrence index for each study. Supplementary Table S8. S-root- and S-fruitbody- specific taxa detected using LEfSe among S-soil, S-root, and S-fruitbody samples. Supplementary Table S9. Phylotypes representing significant correlation with Tricholoma matsutake (|r| ≥ 0.35). Supplementary Table S10. Predicted enzymatic activities enriched in bacterial communities of different niches. Supplementary Table S11. Predicted metabolic pathways (KEGG) enriched in fungal communities of different niches. Overlapped functions among studies are highlighted in bold.
DOI: 10.6084/m9.figshare.31273344
title: Additional file 2 of Circulating inflammatory proteins predict dementia risk, and are linked to structural brain changes and modifiable risk factors

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273344.v1
title: Additional file 2 of Circulating inflammatory proteins predict dementia risk, and are linked to structural brain changes and modifiable risk factors

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273355
title: Additional file 1 of Mutational spectrum of EDA, EDAR, EDARADD, and WNT10A genes in the largest cohort of Russian patients with hypohidrotic ectodermal dysplasia

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.31273355.v1
title: Additional file 1 of Mutational spectrum of EDA, EDAR, EDARADD, and WNT10A genes in the largest cohort of Russian patients with hypohidrotic ectodermal dysplasia

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.31273358
title: Additional file 2 of Mutational spectrum of EDA, EDAR, EDARADD, and WNT10A genes in the largest cohort of Russian patients with hypohidrotic ectodermal dysplasia

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273358.v1
title: Additional file 2 of Mutational spectrum of EDA, EDAR, EDARADD, and WNT10A genes in the largest cohort of Russian patients with hypohidrotic ectodermal dysplasia

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.31273386
title: Additional file 10 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 10. Table S5. The detail information of species-specific sites.
DOI: 10.6084/m9.figshare.31273374
title: Additional file 6 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 6. Table S1. Detail information of self-sequenced or downloaded plastome in this study.
DOI: 10.6084/m9.figshare.31273377
title: Additional file 7 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 7. Table S2. Seedling information of Pc and Py used in this study.
DOI: 10.6084/m9.figshare.31273377.v1
title: Additional file 7 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 7. Table S2. Seedling information of Pc and Py used in this study.
DOI: 10.6084/m9.figshare.31273380.v1
title: Additional file 8 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 8. Table S3. The description of selected climatic variables.
DOI: 10.6084/m9.figshare.31273383
title: Additional file 9 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 9. Table S4. Detailed single model information for ensemble prediction used.
DOI: 10.6084/m9.figshare.31273383.v1
title: Additional file 9 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 9. Table S4. Detailed single model information for ensemble prediction used.
DOI: 10.6084/m9.figshare.31273391.v1
title: Additional file 4 of The c-di-AMP binding protein NadD from Mesomycoplasma ovipneumoniae functions as a phosphodiesterase that inhibits host inflammatory responses

description: Additional file 4. The list of the 30 unique proteins identified in the c-di-AMP group, as well as 246 proteins that are commonly expressed at higher levels in the c-di-AMP group.
DOI: 10.6084/m9.figshare.31273380
title: Additional file 8 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 8. Table S3. The description of selected climatic variables.
DOI: 10.6084/m9.figshare.31273386.v1
title: Additional file 10 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 10. Table S5. The detail information of species-specific sites.
DOI: 10.6084/m9.figshare.31273389.v1
title: Additional file 11 of Assessment of suitable cultivation area for Paris polyphylla var. chinensis and var. yunnanensis under anthropogenic disturbance based on ensemble modeling and germplasm identification

description: Supplementary Material 11. Table S6. The suitable cultivation area for Pc and Py under different scenarios and time periods.
DOI: 10.6084/m9.figshare.31273409.v1
title: Additional file 10 of The c-di-AMP binding protein NadD from Mesomycoplasma ovipneumoniae functions as a phosphodiesterase that inhibits host inflammatory responses

description: Additional file 10. Distribution of the NadD gene across various strains of M. ovipneumoniae.
DOI: 10.6084/m9.figshare.31273388
title: Additional file 3 of The c-di-AMP binding protein NadD from Mesomycoplasma ovipneumoniae functions as a phosphodiesterase that inhibits host inflammatory responses

description: Additional file 3. The list of genes and pathways that are similarly induced by M. ovipneumoniae and c-di-AMP.
DOI: 10.6084/m9.figshare.31273388.v1
title: Additional file 3 of The c-di-AMP binding protein NadD from Mesomycoplasma ovipneumoniae functions as a phosphodiesterase that inhibits host inflammatory responses

description: Additional file 3. The list of genes and pathways that are similarly induced by M. ovipneumoniae and c-di-AMP.
DOI: 10.6084/m9.figshare.31273391
title: Additional file 4 of The c-di-AMP binding protein NadD from Mesomycoplasma ovipneumoniae functions as a phosphodiesterase that inhibits host inflammatory responses

description: Additional file 4. The list of the 30 unique proteins identified in the c-di-AMP group, as well as 246 proteins that are commonly expressed at higher levels in the c-di-AMP group.
DOI: 10.15468/dl.6mryxs
title: Occurrence Download

description: A dataset containing 646 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Uvariastrum pierreanum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 646 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015761-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31273409
title: Additional file 10 of The c-di-AMP binding protein NadD from Mesomycoplasma ovipneumoniae functions as a phosphodiesterase that inhibits host inflammatory responses

description: Additional file 10. Distribution of the NadD gene across various strains of M. ovipneumoniae.
DOI: 10.6084/m9.figshare.31273436
title: Additional file 1 of Biofilm formation on venovenous ECMO cannulas can lead to re-introduction of pathogens during the decannulation process – a small-scale study reveals new insights when combining cultures and molecular results

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.31273436.v1
title: Additional file 1 of Biofilm formation on venovenous ECMO cannulas can lead to re-introduction of pathogens during the decannulation process – a small-scale study reveals new insights when combining cultures and molecular results

description: Supplementary Material 1
DOI: 10.15468/dl.sk4453
title: Occurrence Download

description: A dataset containing 41600 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pterostichus niger"
 ]
}

 The dataset includes 41600 records from 432 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015763-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ac56ve
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Geometry POLYGON((-73.2663 6.47767,-73.27468 6.46138,-73.27016 6.45351,-73.26031 6.45439,-73.25567 6.46125,-73.25103 6.46777,-73.25204 6.47463,-73.25668 6.47992,-73.2663 6.47767))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 29 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015762-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.