cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3706327
title: Gradients1-KOK1606-15N13C_2020-03-10_v1.0

description: Cruise Name: KOK1606, Gradients 1 Project Name: Simons Foundation Gradient NPSG Dataset Description: Standard protocols were used to measure in vitro primary productivity via the 13C radiotracer method [Lengendre et al., 1996] and N2-fixation rate measurements via 15N2 isotopic enriched sewater method described by Wilson et al., 2012. Briefly, water samples were collected before dawn in 4.3L polycarbonate bottles, a total of 120ml of cold enriched 15N2 seawater was added via syringe by inserting bevline tubing to the bottom of the sample bottle and slowly injecting the volume while overflowing. Bottles were then sealed with caps fitted with septum and injected with 0.5ml of 47mM 13C bicarbonate stock and gently mixed by inversion. Samples for 13C-DIC to test the 13C enrichment concentration were taken by removing 1ml of enriched sample volume and injecting it into an evacuated exetainer pre-loaded with 85% phosphoric acid. Bottles were incubated on deck in incubators screened to 48% of surface irradiance and plumbed with flow through surface seawater for temperature regulation. All bottles were incubated in the incubator for ~ 24hr at 48% light level and at select stations with shading at ~24% light level. Duplicate light bottles were paired with dark bottles and time final bottles that received no enrichment. Time zero bottles were also collected and sacrificed for each station. Following dawn to dawn incubations, each sample was filtered onto a combusted 25mm glass fiber filter, filters were folded in half and placed in combusted aluminum foil and stored at -80°C for later analysis. Post-cruise, all filters were thawed and dried overnight at 60°C. Samples were then balled into Ag and Sn boats and plated for analysis. The carbon and nitrogen isotopic composition (13C and 15N, respectively) were analyzed by continuous-flow isotope ratio mass spectrometry using a Carlo Erba elemental analyzer (EA) connected to a Thermo DeltaPlus isotope ratio mass spectrometer (IRMS). For all samples the international standards USGS40 (d13C = -26.389 permil vs VPDB, d15N = -4.52 permil vs air) and USGS41 (d13C = +37.626permil vs VPDB, d15N = +47.6 permil vs air) were used to calibrate each run of samples and the international standard IAEA-600 (d13C = -27.771 permil vs VPDB, d15N = +1.0 permil vs air) was used as a check standard (i.e., not used to calibrate data).13C-DIC samples were sent to UC Davis for analysis, resultant data was used to correct the 13C DIC addition for each bottle.
DOI: 10.7910/dvn/65j45a/3nyoha
title: T2_KO_SMA_1.12.tif

description: :unav
DOI: 10.7910/dvn/65j45a/blc5zp
title: T2_KO_CD31_1.16.tif

description: :unav
DOI: 10.7910/dvn/65j45a/h0jkxx
title: T2_KO_CD31_1.11.tif

description: :unav
DOI: 10.7910/dvn/65j45a/hevycc
title: T6_WT_CD31_2.7.tif

description: :unav
DOI: 10.7910/dvn/65j45a/hwjn2a
title: T14_KO_SMA_1.13.tif

description: :unav
DOI: 10.7910/dvn/65j45a/j2lmlo
title: T21_WT_CD31_2.24.tif

description: :unav
DOI: 10.7910/dvn/65j45a/k8uxxp
title: T16_WT_SMA_1.22.tif

description: :unav
DOI: 10.7910/dvn/65j45a/kxwbpd
title: T14_KO_SMA_2.34.tif

description: :unav
DOI: 10.7910/dvn/65j45a/pihial
title: T13_KO_SMA_2.10.tif

description: :unav
DOI: 10.3886/e118173
title: How Do Florida Providers Receive their VPK Readiness Rate?

description: This article discusses the VPK Readiness Rate Calculation Method followed by the Florida Office of Early Learning: the time frame of the FLKRS (Star Early Literacy Test), the method used to test the children and the number of children participating in the FLKRSTest.
DOI: 10.3886/e118173v1
title: How Do Florida Providers Receive their VPK Readiness Rate?

description: This article discusses the VPK Readiness Rate Calculation Method followed by the Florida Office of Early Learning: the time frame of the FLKRS (Star Early Literacy Test), the method used to test the children and the number of children participating in the FLKRSTest.
DOI: 10.7910/dvn/65j45a/8ooj4m
title: T21_WT_SMA_2.6.tif

description: :unav
DOI: 10.7910/dvn/65j45a/ey6niq
title: T20_WT_CD31_1.10.tif

description: :unav
DOI: 10.7910/dvn/65j45a/lgv6u5
title: T14_KO_CD31_2.12.tif

description: :unav
DOI: 10.7910/dvn/65j45a/m30tck
title: T16_WT_CD31_1.27.tif

description: :unav
DOI: 10.7910/dvn/65j45a/p0050w
title: T20_WT_CD31_1.5.tif

description: :unav
DOI: 10.7910/dvn/65j45a/q5tuk7
title: T13_KO_SMA_2.18.tif

description: :unav
DOI: 10.7910/dvn/65j45a/rmibkj
title: T20_WT_CD31_1.9.tif

description: :unav
DOI: 10.7910/dvn/65j45a/vw8g7a
title: T16_WT_CD31_1.35.tif

description: :unav
DOI: 10.7910/dvn/65j45a/xmxdik
title: T21_WT_SMA_1.12.tif

description: :unav
DOI: 10.7910/dvn/65j45a/8iymvg
title: T6_WT_CD31_1.5.tif

description: :unav
DOI: 10.7910/dvn/65j45a/eznjnm
title: T1_WT_CD31_1.5.tif

description: :unav
DOI: 10.7910/dvn/65j45a/fnbic3
title: T1_WT_SMA_2.10.tif

description: :unav
DOI: 10.7910/dvn/65j45a/g1drzo
title: T2_KO_SMA_1.4.tif

description: :unav
DOI: 10.7910/dvn/65j45a/jj18u5
title: T2_KO_CD31_2.10.tif

description: :unav
DOI: 10.7910/dvn/65j45a/p5e79k
title: T13_KO_CD31_2.8.tif

description: :unav
DOI: 10.7910/dvn/65j45a/weyidr
title: T18_WT_SMA_2.10.tif

description: :unav
DOI: 10.7910/dvn/65j45a/xykb1p
title: T13_KO_CD31_1.8.tif

description: :unav
DOI: 10.7910/dvn/65j45a/yd6bnm
title: T21_WT_SMA_2.18.tif

description: :unav
DOI: 10.7910/dvn/65j45a/1auypi
title: T16_WT_CD31_2.32.tif

description: :unav
DOI: 10.7910/dvn/65j45a/fzolx0
title: T21_WT_CD31_1.27.tif

description: :unav
DOI: 10.7910/dvn/65j45a/i0bzxh
title: T13_KO_SMA_1.19.tif

description: :unav
DOI: 10.7910/dvn/65j45a/jnbsbg
title: T18_WT_SMA_2.4.tif

description: :unav
DOI: 10.7910/dvn/65j45a/npuxzy
title: T12_WT_SMA_2.5.tif

description: :unav
DOI: 10.7910/dvn/65j45a/pnkr7y
title: T20_WT_SMA_1.6.tif

description: :unav
DOI: 10.7910/dvn/65j45a/rqcbrs
title: T14_KO_SMA_1.11.tif

description: :unav
DOI: 10.5061/dryad.k713n/4
title: Geometric morphometric data for body shape for Isle Royale

description: Landmarks and semi-landmarks for body shape for Isle Royale in .tps format
DOI: 10.5061/dryad.k713n/5
title: Geometric morphometric data for head shape for Isle Royale

description: Landmarks and semi-landmarks for head shape for Isle Royale in .tps format
DOI: 10.5061/dryad.k713n/6
title: Geometric morphometric data for body shape for Stannard Rock

description: Landmarks and semi-landmarks for body shape for Stannard Rock in .tps format
DOI: 10.5061/dryad.k713n/7
title: Geometric morphometric data for head shape for Stannard Rock

description: Landmarks and semi-landmarks for head shape for Stannard Rock in .tps format
DOI: 10.5061/dryad.k713n/8
title: Geometric morphometric data for body shape for Superior Shoals

description: Landmarks and semi-landmarks for body shape for Superior Shoals in .tps format
DOI: 10.5061/dryad.mc132/1
title: Raw data for experiment I: Larval behaviour

description: This .csv file contains data on larval wriggle count, wriggle burst length, surface visit frequency and time spent at the water surface.
DOI: 10.5061/dryad.mc132/2
title: Raw data for experiment II: Predator responses to altered larval behaviour

description: This .csv file contains data on preference shown by fish to spot digital mosquito larvae simulated to wriggle in short and long bursts of wriggles.
DOI: 10.5061/dryad.mc132/3
title: R code - TEEE 1313785

description: R code for visualisation and analysis of data
DOI: 10.5061/dryad.n7fr3/2
title: FisherMLselectionSQ.Rcode

description: R code to recreate multilevel selection analysis from "Multilevel and sex-specific selection on competitive traits in North American red squirrels"
DOI: 10.5061/dryad.sh511/1
title: Raw data

description: Raw data (FA, fibaodenoma; PT, phyllodes tumor; FEL, fibroepithelial lesion)
DOI: 10.5061/dryad.0mr42/1
title: dryad_LGEW_EE17

description: This file contains the R-script we used to analyze our data for this manuscript (details of the analysis are given in the manuscript). It also contains two different input files for R. 'parental_characteristics.txt' is a text file with all the measurements we took for the brown trout parents and 'embryo_stats.txt' are all the traits of the embryos.
DOI: 10.5061/dryad.163mp/1
title: Retinal laser speckle data

description: The data file contains 8 blocks each representing a single experiment. In each experiment (recordings from one retina), several vessels were analyzed. In each block each individual vessel is marked with r. The data block representing each individual vessel contains a time series termed "lineTS" giving the speckle signal value averaged over the pixels in the center line. In addition there is a time series termed "vessel TS" containing the speckle signal value averaged over the pixels in the segmented vessel. These are the most important data. In total the following data are available: 

Alpha - estimated angle of the vessel in image axis;
D - estimated diameter normalized by angle (double precision);
Dleft - final estimation of the distance to the left vessel boundary from the center line;
Dp - estimated diameter in pixels, not normalized by angle (integer precision);
Dright - final estimation of the distance to the right vessel boundary from the center line;
LineP - number of pixels in the center line;
LineTS  - Speckle signal value averaged over the pixels in the center line;
MaskLine - binary mask used to select pixels which belong to the center line;
MaskVessel -  binary mask used to select pixels which belong to the vessel;
Profile - average vessel profile in time;
Rleft - first estimation of the distance to the left vessel boundary from the center line;
Rright -first estimation of the distance to the right vessel boundary from the center line;
VesselP - number of pixels in the recognized vessel segment;
VesselTS - Speckle signal value averaged over the pixels in the segmented vessel;
X1, X2, Y1, Y2 - coordinates of the segmentation region in the full -sized image.

For further information please contact the corresponding author of the related paper.
DOI: 10.5061/dryad.1768j/1
title: Shorebird detections for three species

description: Shorebird species, perpendicular distance to species, date, time post fire, and number of individuals in the cluster.
DOI: 10.5061/dryad.1925k/1
title: Spatial grid with fire and forest loss data

description: Spatial grid with fire and forest loss data, pixels are in decimal degrees. def = deforestation 0 no 1 loss, yloss = year of loss, fire	=fire recorded 0 no 1 yes, yfire = year of fire, disedge09 = distance to forest edge in 2009.
DOI: 10.5061/dryad.1925k/2
title: Veredas de Colombia

description: Submunicipal geographic units of Colombia (veredas) in shapefile format.
DOI: 10.5061/dryad.1925k/3
title: R script for INLA deforestation modeling

description: R script to organize data and fit deforestation models, creates first version of file fires.Rdata to be analyzed further downstream requires files bothgridandfire.csv and Veredas_de_Colombia.shp in the same folder. Unzip Veredas_de_Colombia.zip to recreate the shapefile data.
DOI: 10.5061/dryad.1925k/4
title: R script to make predictions based on INLA modeling

description: R script to make plots and predictions. Takes file fires.Rdata generated by fires.R and continues analyses, calculates AUC, makes plots.
DOI: 10.5061/dryad.1bv83/1
title: Scrips and raw data

description: This folder contains scripts and data
DOI: 10.5061/dryad.2jn03/2
title: Blink behaviour, wavelength and anatomy dataset for Anomalops katoptron
DOI: 10.5061/dryad.48963/1
title: Data_Dryad_HDY-16-OR0297R

description: Phenotypic data used for the statistical analyses of this paper. Head lines describe the different traits and factors of variation.
DOI: 10.5061/dryad.48963/2
title: Pedigree_Dryad_HDY-16-OR0297R

description: Pedigree information related to the genetic analyses carried out for this publication.
DOI: 10.5061/dryad.51b25/1
title: Dryad - Between year estimates SPatrick JAE 2016

description: Data for all analyses of between year differences in fidelity
DOI: 10.5061/dryad.51b25/2
title: Dryad - Within year estimates SPatrick JAE 2016

description: Data for all the within year estimates of fidelity used for all analyses
DOI: 10.5061/dryad.64kv7/1
title: barbui_database_to_share

description: Database of studies incuded in the meta-analysis.
DOI: 10.5061/dryad.6dc86/1
title: Filice_Long_Dryad

description: This file contains data collected from individual hemiclonal female fruit flies that were housed with males from either a "high-harm" or "low-harm" phenotype line, for either a "short" or a long period of time. The number of frames that each individual female spent on the control sub-chamber, the "low-harm" sub-chamber, the "high-harm" sub-chamber, the "food" sub-chamber or eleswhere in the arena ("none") are recorded.
DOI: 10.5061/dryad.6j700/1
title: Morphological data and survival

description: Raw data of the survival and morphological traits (body weight, tarsus length, wing length) from day 0 to day 2000.
DOI: 10.5061/dryad.6j700/2
title: Behavioural data

description: Raw data of the behavioural trials (special environment and special object) conducted thrice during the life, at the age of 100, 200 and 1600 days.
DOI: 10.5061/dryad.6p87s/1
title: HoAgrawal2017_PlotData

description: Data used to create Figures1, 2, 3.
DOI: 10.5061/dryad.73p8s/1
title: Raw data for Liu_et_al_manuscript_Functional Ecology_FE-2016-00735

description: This is the full set of raw data for Liu et al. manuscript of Functional Ecology_FE-2016-00735. It is a package containing 4 Microsoft Excel files.
DOI: 10.5061/dryad.79310/1
title: Preference functions of female brown headed cowbirds for male multimodal signals

description: This is an excel file noting the three behaviors we examined during our mating trials: (1) whether females gave a copulatory solicitation display (CSD) to a given male, (2) the CSD duration and (3) the latency to begin a CSD. The file is organized chronologically so that the readers can see the experimental block, trial day, and experimental order on a given day for the females (i.e., birds) in the experiment. Male signals are described categorically, as high/low intensity visual display and high/low potency song and also continuously as song factor 1-3 and visual display factor 1-2. Finally, we have some descriptive data on each female, including her mass and her estrogen levels measured at the end of the experiment.
DOI: 10.5061/dryad.8567b/4
title: Specimen data

description: Specimen data. Columns: (1) SEQ = sequential row numbers; (2) ID = researcher’s specimen identification number; (3) Clade = taxon name; (4) family = spider taxonomic family; (5) country = country of specimen collection; (6) spectrum_file_name = reflectance data file name, same as in 'spec.files.csv' file.
DOI: 10.5061/dryad.8567b/5
title: Consensus tree from the Bayesian analysis

description: Majority rule consensus tree returned from the Bayesian analysis ran in MrBayes 3.2.2.
DOI: 10.5061/dryad.8567b/6
title: Phylogenetic tree data

description: Phylogenetic tree data. Columns: (1) taxon = phylogenetic tree tip labels; (2) flw.categ = flower dwelling habit, either a flower-dweller (FLW) or a non-flower dweller (NOFLW); (3) biog_reg = region of collection, either collected in Australia or in Europe plus Malaysia; (4) sample.size = reflectance data sample sizes.
DOI: 10.5061/dryad.8567b/7
title: Phylogenetic tree

description: Phylogenetic tree. Majority rule consensus tree from the Bayesian analysis ultrametricised and pruned. See file 'tree FULL.nex' for the original tree.
DOI: 10.5061/dryad.8567b/8
title: Flower-dwelling habit of Thomisidae

description: Number and percentage of individuals per taxon collected directly on flowers (flower) and number individuals collected on other substratum or using a sweepnet (non-flower).
DOI: 10.5061/dryad.9f63r/1
title: Karyology Meloidogyne africana

description: Karyology Meloidogyne africana
DOI: 10.5061/dryad.9f63r/2
title: Karyology Meloidogyne ardenensis

description: Karyology Meloidogyne ardenensis
DOI: 10.5061/dryad.9f63r/3
title: Karyology Meloidogyne javanica

description: Karyology Meloidogyne javanica
DOI: 10.5061/dryad.9f63r/4
title: Karyology Meloidogyne mali

description: Karyology Meloidogyne mali
DOI: 10.5061/dryad.9f63r/5
title: Meloidogyne africana female reproducive system

description: Meloidogyne africana female reproducive system
DOI: 10.5061/dryad.9f63r/6
title: Meloidogyne mali female reproducive system

description: Meloidogyne mali female reproducive system
DOI: 10.5061/dryad.9f63r/7
title: Multiple sequence alignments

description: Multiple sequence alignments
DOI: 10.5061/dryad.bb28n/1
title: data from: Soil drainage facilitates earthworm invasion and subsequent carbon loss from peatland soil

description: dataset for both the earthworm response experiment and the primary experiment
DOI: 10.5061/dryad.cq612/1
title: Marchant_374_SNP_Genotypes

description: This compressed file contains the SNP genotypes of the 374 individuals used to conduct the experiments in the Current Biology article, "Canine Brachycephaly is Associated with a Retrotransposon-Mediated Missplicing of SMOC2".
DOI: 10.5061/dryad.dg154/1
title: All PAV dataset
DOI: 10.5061/dryad.dj51c/1
title: Fig 4

description: Figure-4: Dendrogram generated from an unweighted pair group method analysis (UPGMA) cluster analysis s based on salt responsive cgSSR markers. First two clusters showing all tolerant genotypes, whereas third cluster showing all susceptible genotypes.
DOI: 10.5061/dryad.f17j3/1
title: Data for Cook, Lewandowsky & Ecker (2017)

description: Data for Experiments 1 & 2 for Cook, Lewandowsky & Ecker (2017). Neutralizing Misinformation Through Inoculation: Exposing Misleading Argumentation Techniques Reduces Their Influence. PLOS ONE.
DOI: 10.5061/dryad.f5qk7/1
title: Supplementary File 2 - Probe Design and Sequences

description: Complete set of probes used for cross-species targeted capture and associated data
DOI: 10.5061/dryad.f5qk7/3
title: Supplementary File 4 - Anolis Reference

description: Reference file used for assembly
DOI: 10.5061/dryad.f5qk7/4
title: Supplementary File 5 - Snake Reference

description: Reference file used for assembly
DOI: 10.5061/dryad.f5qk7/5
title: Supplementary File 6 - Gekko Reference

description: Reference file used for assembly
DOI: 10.5061/dryad.g7h7n/31
title: West N2

description: West Lake Hill's N2 and Chlorophyll a values
DOI: 10.5061/dryad.g7h7n/32
title: Elison Lake

description: Elison Lake diatom raw count data and relative abundances including basionyms and modern taxonomic designations
DOI: 10.5061/dryad.g7h7n/33
title: High Lake

description: High Lake diatom raw count data and relative abundances including basionyms and modern taxonomic designations
DOI: 10.5061/dryad.g7h7n/34
title: Moraine Pond

description: Moraine Pond diatom raw count data and relative abundances including basionyms and modern taxonomic designations
DOI: 10.5061/dryad.g7h7n/35
title: Paradise Pond

description: Paradise Pond diatom raw count data and relative abundances including basionyms and modern taxonomic designations
DOI: 10.5061/dryad.g7h7n/36
title: Plateau Pond 2

description: Plateau Pond 2 diatom raw count data and relative abundances including basionyms and modern taxonomic designations
DOI: 10.5061/dryad.g7h7n/37
title: Proteus lake

description: Proteus Lake diatom raw count data and relative abundances including basionyms and modern taxonomic designations
DOI: 10.5061/dryad.g7h7n/38
title: Sverdrup Pass Ponds

description: Sverdrup Pond 5 and 8 diatom raw count data and relative abundances including basionyms and modern taxonomic designations
DOI: 10.5061/dryad.g7h7n/39
title: West Lake

description: West Lake diatom raw count data and relative abundances including basionyms and modern taxonomic designations
DOI: 10.5061/dryad.j3t86/1
title: Datafiles and scripts for Shelton et al. 2017

description: This file is composed of four sub-files.  The "READ ME.zip" contains two word files that describe how the data files and R scripts interact to provide.  "Csv data files.zip" contains four csv files including raw data used in the analysis, a spatial projection data file required to generate predictions used in the analysis, a file detailing the spatial locations used in the analysis, and the final output from the statistical model used to create figures.  "Gulf of Alaska shapefile.zip" contains the files needed to open and manipulate the spatial data layers for the Gulf of Alaska. "R scripts.zip" contains seven R scripts that interact to produce the analysis and plot in the manuscript (see ReadMe for more details).
DOI: 10.5061/dryad.k713n/10
title: sample_information

description: Information for each genotyped individuals
DOI: 10.5061/dryad.k713n/9
title: Geometric morphometric data for head shape for Superior Shoals

description: Landmarks and semi-landmarks for head shape for Superior Shoals in .tps format
DOI: 10.5061/dryad.pp0jp/1
title: CDBird_OccupancyAnalysis_Data
DOI: 10.5061/dryad.pp0jp/2
title: CDMammal_OccupancyAnalysis_Data
DOI: 10.5061/dryad.pp0jp/3
title: CDBird_CDUndevelopedComparison_Data
DOI: 10.5061/dryad.pp0jp/4
title: CDMammal_CDUndevelopedComparison_Data
DOI: 10.5061/dryad.s29j7/1
title: Supplementary+Data+1

description: Slices from XMT scan of two enrolled specimens of Bailiaspis? glabrata (MPZ2017/310-311).
DOI: 10.5061/dryad.vh396/1
title: CI_scan

description: Data related to population scans for cytoplasmic incompatibility (CI).
DOI: 10.5061/dryad.vh396/2
title: Fecundity_scan

description: Data related to population scans for Wolbachia effects on host fecundity.
DOI: 10.5061/dryad.1925k/5
title: R script to compare models to forest loss alert system

description: R script to compare to the "Alertas Tempranas" system. Data from "Alertas Tempranas" are in a folder called /raster_alertas. Takes file fires.Rdata from predict.R and compares those results to results from the national deforestation alert system.
DOI: 10.5061/dryad.1925k/6
title: 2013 and 2014 early warning system alerts

description: Zipped folder with 2013 and 2014 early warning alerts for the region of analysis in Colombia. Place folder in the folder with compare.R script to replicate analysis.
DOI: 10.5061/dryad.195k3/1
title: microsatellite genotype data for Pentapharsodinium dalei

description: microsatellite genotypes for strains isolated from 5 depths (1, 10, 14, 20 and 34cm) corresponding to years 2006, 1985, 1970, 1960 and 1922 by six different markers (Pendals 3, 7, 14, 19, 23, 30)
DOI: 10.5061/dryad.1k7tr/1
title: Tonin et al Functional Ecology datasets