cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.58132/swfdbv
title: Identification of BRCA1 gene mutation variants in clinical samples without labeling step – comparison of functionality and sensitivity of SPR and SERS sensors

description: SERS (surface-enhanced Raman scattering) and SPR (surface plasmon resonance) sensors for the identification of six the most popular in Poland variants of BRCA1 gene mutation without labelling have been constructed and tested with clinical samples. Both sensors were based on the selective hybridization of target DNA with the capture DNA immobilized on plasmonic substrates. Moreover, in both sensors the same thiolated capture DNA was used. The mutation identification process using SPR detector relied on the shape of the SPR sensorgrams, whereas for the SERS sensors, the intensity of the Raman band at about 715-735 cm-1 (this band is due to the superimposition of mainly the band due to the v(C-S) vibration of the alkanethiol chain in the trans conformation and the band due to the breathing vibration of adenine) was used as an analytical signal. The demonstrated biosensors are characterized by the low detection limit at the level of pg·uL–1, wide analytical range and high selectivity. It was found that for different DNA sequences, a SPR or SERS sensor achieves greater detection sensitivity, which means that the selection of the optimal sensor type depends on the sequence of the target DNA.
DOI: 10.15468/dl.pdnq2a
title: Occurrence Download

description: A dataset containing 958 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monosporus pedicellatus (Sm.) Solier & Castagne"
 ]
}

 The dataset includes 958 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063755-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.7463348
title: Sailbuoy Iskant PolarFront EK80 echosounder data [1/12] 2021-05-16 to 2021-05-21

description: This dataset is part 1/12 of Sailbuoy Iskant PolarFront EK80 and contains ~46.8 GB of data in 520 files, captured 2021-05-16 to 2021-05-21.

For more information, see: Sailbuoy Iskant PolarFront EK80 echosounder datasets and sensor data 2021-05 to 2021-07.
DOI: 10.5281/zenodo.7463347
title: Sailbuoy Iskant PolarFront EK80 echosounder data [1/12] 2021-05-16 to 2021-05-21

description: This dataset is part 1/12 of Sailbuoy Iskant PolarFront EK80 and contains ~46.8 GB of data in 520 files, captured 2021-05-16 to 2021-05-21.

For more information, see: Sailbuoy Iskant PolarFront EK80 echosounder datasets and sensor data 2021-05 to 2021-07.
DOI: 10.15468/dl.c4nzfe
title: Occurrence Download

description: A dataset containing 3314 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chaetomorpha aerea (Dillwyn) Kütz."
 ]
}

 The dataset includes 3314 records from 174 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063756-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fdv4uf
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "Geometry POLYGON((-8.57756 35.85599,-0.79426 35.94345,0.08027 38.39212,-7.37153 38.84324,-8.57756 35.85599))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Azolla filiculoides Lam."
 ]
}

 The dataset includes 57 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063758-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tymt6g
title: Occurrence Download

description: A dataset containing 842 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (January, February, March, April, November, December)",
 "TaxonKey is Fragaria ×ananassa (Weston) Rozier",
 "Year 1994-2024"
 ]
}

 The dataset includes 842 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063757-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.7887046
title: Image Dataset of Brown Marmorated Stink Bug (BMSB) or Halyomorpha Halys (HH)

description: The dataset contains images of the Brown Marmorated Stink Bug (BMSB) or Halyomorpha Halys (HH). It includes two different types of datasets. The first one contains images captured from the surface of sticky traps that caught insects, which may consist of Brown Marmorated Stink Bugs or other insect species. The second one comprises images of the Brown Marmorated Stink Bug alongside other insect species that could be used for BMSB classification.

Kargar, A., Zorbas, D., Tedesco, S., Gaffney, M., & O’Flynn, B. (2024). Detecting Halyomorpha halys using a low-power edge-based monitoring system. Computers and Electronics in Agriculture, 221, 108935.
DOI: 10.15468/dl.qw6ter
title: Occurrence Download

description: A dataset containing 7000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus palustris Mill.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7000 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063759-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjqcz5
title: Occurrence Download

description: A dataset containing 10386 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "GadmGid is SLE",
 "TaxonKey is Passeriformes",
 "Year 1994-2025"
 ]
}

 The dataset includes 10386 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063760-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y8k6j2
title: Occurrence Download

description: A dataset containing 1027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus parviflora Siebold & Zucc.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1027 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063762-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25416760.v1
title: Supplementary data to the paper: The power and limits of predicting exon-exon interactions using protein 3D structures

description: Alternative splicing (AS) effects on cellular functions can be captured by studying changes in the underlying protein-protein interactions (PPIs). Because AS results in the gain or loss of exons, existing methods for predicting AS-related PPI changes utilize known PPI interfacing exon-exon interactions (EEIs), which only cover ~5% of known human PPIs. Hence, there is a need to extend the existing limited EEI knowledge to advance the functional understanding of AS. In this study, we explore whether existing computational PPI interface prediction (PPIIP) methods, originally designed to predict residue-residue interactions (RRIs), can be used to predict EEIs. We evaluate three recent state-of-the-art PPIIP methods for the RRI- as well as EEI-prediction tasks using known protein complex structures, covering ~230,000 RRIs and ~27,000 EEIs. Our results provide the first evidence that existing PPIIP methods can be extended for the EEI prediction task, showing F-score, precision, and recall performances of up to ~38%, ~63%, and ~28%, respectively, with a false discovery rate of less than 5%. Our study provides insights into the power and limits of existing PPIIP methods to predict EEIs, thus guiding future developments of computational methods for the EEI prediction task. We provide streamlined computational pipelines integrating each of the three considered PPIIP methods for the EEI prediction task to be utilized by the scientific community.
DOI: 10.5281/zenodo.14628303
title: Chicken
DOI: 10.5281/zenodo.14628304
title: Chicken
DOI: 10.15468/dl.kab7sf
title: Occurrence Download

description: A dataset containing 9233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus patula Schiede ex Schltdl. & Cham.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9233 records from 165 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063764-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bvxesy
title: Occurrence Download

description: A dataset containing 3212 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Melitaea athalia Wachtelweizen-Scheckenfalter",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 3212 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022362-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kxvc7f
title: Occurrence Download

description: A dataset containing 7295 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Erebia euryale Esper, 1777",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 7295 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022363-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zpx3hx
title: Occurrence Download

description: A dataset listing the 4028005 species recorded in GBIF matching the query:
{
 "OccurrenceStatus" : [
 "is Present"
 ]
}

 The dataset's 4028005 records were derived from 76936 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022346-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.afefsy
title: Occurrence Download

description: A dataset containing 42253 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Ematurga atomaria (Linnaeus, 1758)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 42253 records from 295 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022364-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.72vqrz
title: Occurrence Download

description: A dataset containing 2884252 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Denmark",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than 50000",
 "Year is 2021",
 "DecimalLongitude is greater than or equal to 7.0",
 "DecimalLongitude is less than or equal to 13.0",
 "DecimalLatitude is greater than or equal to 54.5",
 "DecimalLatitude is less than or equal to 58.0"
 ]
}

 The dataset includes 2884252 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022340-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4vfhk
title: Occurrence Download

description: A dataset containing 16697 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Siona lineata (Scopoli, 1763)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 16697 records from 182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022366-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ud2z8x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Tympanuchus pallidicinctus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-107.485454 25.56947, -93.050856 25.56947, -93.050856 36.976367, -107.485454 36.976367, -107.485454 25.56947))",
 "Year is greater than or equal to 1980"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022369-241007104925546/datasets/export for details.
DOI: 10.15468/dl.w2zgwz
title: Occurrence Download

description: A dataset containing 782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-120.21994 32.42381,-113.88643 32.42381,-113.88643 34.56187,-120.21994 34.56187,-120.21994 32.42381))",
 "TaxonKey is Tamarix ramosissima Ledeb."
 ]
}

 The dataset includes 782 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022370-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p9r64k
title: Occurrence Download

description: A dataset containing 13512 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Hemistola chrysoprasaria (Esper, 1794)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 13512 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022368-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vpkw3m
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Tympanuchus pallidicinctus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-107.485454 25.56947, -93.050856 25.56947, -93.050856 36.976367, -107.485454 36.976367, -107.485454 25.56947))",
 "Year is greater than or equal to 1980"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022371-241007104925546/datasets/export for details.
DOI: 10.15468/dl.r6znas
title: Occurrence Download

description: A dataset containing 15494 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Scopula ternata Schrank, 1802",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 15494 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022373-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7dr7mb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Charadrius melodus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-107.485454 25.56947, -93.050856 25.56947, -93.050856 36.976367, -107.485454 36.976367, -107.485454 25.56947))",
 "Year is greater than or equal to 1980"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022374-241007104925546/datasets/export for details.
DOI: 10.15468/dl.f9d3y6
title: Occurrence Download

description: A dataset containing 470 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acropolitis rudisana (Walker, 1863)",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null",
 "Year is one of (2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022, 2023, 2024)"
 ]
}

 The dataset includes 470 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022376-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qrpunc
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Achatina achatina (Linnaeus, 1758)",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null",
 "Year is one of (2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022, 2023, 2024)"
 ]
}

 The dataset includes 65 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022375-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kgrb6e
title: Occurrence Download

description: A dataset containing 279832 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zea L."
 ]
}

 The dataset includes 279832 records from 947 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022365-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17633/rd.brunel.29263703
title: Structure for HIV - 1 protease - chain A in GRO format

description: Protein structure in GRO format. Original wild-type structure from PDBID 2PC0.
DOI: 10.17633/rd.brunel.29263703.v1
title: Structure for HIV - 1 protease - chain A in GRO format

description: Protein structure in GRO format. Original wild-type structure from PDBID 2PC0.
DOI: 10.15468/dl.4b2r6p
title: Occurrence Download

description: A dataset containing 2319 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus saxatilis F.Cuvier, 1823"
 ]
}

 The dataset includes 2319 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032711-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.msryyy
title: Occurrence Download

description: A dataset containing 1668609 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Données naturalistes opportunistes Faune-France-Données Naturalistes Faune-France 2021 Communes"
 ]
}

 The dataset includes 1668609 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032695-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17633/rd.brunel.29263709
title: Conformational state labels for Molecular Dynamics trajectory of HIV - 1 protease

description: The table contains the values for the projection of each MD frame into the (PC1, PC2) essential space. Density values of the associated region of the space are reported. Basin and state labels are assigned alongside an occurence table for the frame in each of the subsets derived for the study. The file is in CSV format with header columns included.
DOI: 10.17633/rd.brunel.29263709.v1
title: Conformational state labels for Molecular Dynamics trajectory of HIV - 1 protease

description: The table contains the values for the projection of each MD frame into the (PC1, PC2) essential space. Density values of the associated region of the space are reported. Basin and state labels are assigned alongside an occurence table for the frame in each of the subsets derived for the study. The file is in CSV format with header columns included.
DOI: 10.15468/dl.68bxaj
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tragopogon vaginatus Ownbey & Rech.fil."
 ]
}

 The dataset includes 12 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018625-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5t8s7w
title: Occurrence Download

description: A dataset containing 466 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Romerolagus diazi (Ferrari-Pérez, 1893)"
 ]
}

 The dataset includes 466 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015324-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5tytf4
title: Occurrence Download

description: A dataset containing 795 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fotografía digital para el estudio del impacto del cambio climático en la biodiversidad"
 ]
}

 The dataset includes 795 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0355788-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.