cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3613076_d3.v1
title: Additional file 5: of Comparative genomics of 43 strains of Xanthomonas citri pv. citri reveals the evolutionary events giving rise to pathotypes with different host ranges

description: Genic and intergenic pathotype-specific SNPs. Information about all identified pathotype-specific SNPs in the dataset, including the SNP location, the codon and amino acid change, and functional gene information where available. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.c.3613076_d4.v1
title: Additional file 1: of Comparative genomics of 43 strains of Xanthomonas citri pv. citri reveals the evolutionary events giving rise to pathotypes with different host ranges

description: Detected regions of recombination in all strains. Information regarding the 21 detected regions of recombination across all examinied X. citri pv. citri strains, including information about the strains in which the event is detected, the genes contained within the recombination zone and functional information about the genes where available. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.c.3613091_d1.v1
title: Additional file 1: of Biomechanical and biochemical properties of the thoracic aorta in warmblood horses, Friesian horses, and Friesians with aortic rupture

description: Summary of the biomechanical and biochemical properties of the equine thoracic aorta in the 3 groups of horses. (XLSX 26 kb)
DOI: 10.57780/esa-0knbbso
title: 093100

description: We propose contemporaneous 60 ks NuSTAR and 30 ks XMM-Newton observations of theHMGB 1FGL J1018.6-5856 during the sharp decline of the pre-periastron keV--TeVa??a??spikea??a?? of its 16.5 day orbit. With the first combinedNuSTAR+XMM-Newton observations we will monitor the evolution of the 0.7-30 keVspectral shape from the peak of the spike to after its decay to discriminatebetween the synchrotron or IC losses driving its extreme physical conditions andsearch for signatures of a NS or BH using the excellent timing resolution thanksto both NuSTAR and XMM-Newton. Thanks to their broadband capabilities largeeffective areas and superior timing resolution our observations of J1018 willreveal crucial insights on physical mechanisms driving emission in the HMGB population. [truncated! Please see actual data for full text]
DOI: 10.6084/m9.figshare.c.3613076_d5.v1
title: Additional file 2: of Comparative genomics of 43 strains of Xanthomonas citri pv. citri reveals the evolutionary events giving rise to pathotypes with different host ranges

description: Pathotype-specific regions of recombination and number of introduced variant residues in genes. Information about the pathotype-specific recombination regions, including which genes are involved in each event, and the number of pathotype-specific variant residues found in each gene. “-” denotes cases where the number of pathotype-specific residues could not be calculated. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3613076_d6.v1
title: Additional file 7: of Comparative genomics of 43 strains of Xanthomonas citri pv. citri reveals the evolutionary events giving rise to pathotypes with different host ranges

description: Examination of putative pathotype-specific genes from Zhang et al. [ 17 ]. Each strain in the dataset is represented as a column, and each row represents best reciprocal hits to genes identified as either unique to A strains or unique to Aw and A* strains by Zhang et al. [17] with a description of their status from our dataset, their distribution across all strains in our dataset, and whether they coincide with detected regions of recombination. The strains are highlighted based on their pathotype: A strains (blue), Aw strains (orange) and A* strains (purple). (XLSX 63 kb)
DOI: 10.6084/m9.figshare.c.3613076_d7.v1
title: Additional file 4: of Comparative genomics of 43 strains of Xanthomonas citri pv. citri reveals the evolutionary events giving rise to pathotypes with different host ranges

description: Table of best reciprocal blast hit relationships for genes across all examined strains. Each strain in the dataset is represented as a column, and each row represents best reciprocal hits. The rows are ordered initially by the gene order from IAPAR 306, and then arbitrarily by different strains cycling through the A, Aw and A* pathotypes. The strains are highlighted based on their pathotype: A strains (blue), Aw strains (orange) and A* strains (purple). Additional information for certain genes are contained in parenthesis after the systematic gene name. (XLSX 2199 kb)
DOI: 10.5284/1124499
title: Images and Text from a Watching Brief at Rose Cottage, Main Street, East Haddon, West Northamptonshire, October 2021

description: This collection consists of images from a watching brief by MOLA Northampton at Rose Cottage, Main Street, East Haddon, West Northamptonshire, in October 2021. Three archaeological features were identified. They were all subject to a sample section excavated by hand and all deposits encountered during the excavation were fully recorded, following standard MOLA procedures Cut into the natural were two ditches and a gully. One ditch and the gully were aligned approximately north-south and the other ditch was aligned approximately east-west. The ditches both contained sherds of 14th and 15th century pottery, but the gully contained no finds therefore is undated.
DOI: 10.6084/m9.figshare.c.3613139_d1.v1
title: Additional file 1: Table S1. of Anthelmintic activity of silver-extract nanoparticles synthesized from the combination of silver nanoparticles and M. charantia fruit extract

description: Anthemintic activity of Extract, AgNPs, and Ag-Extract-NPs. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3613154_d2.v1
title: Additional file 4: of Genomic analysis of the multi-host pathogen Erysipelothrix rhusiopathiae reveals extensive recombination as well as the existence of three generalist clades with wide geographic distribution

description: File S1. Program versions and specific command line options. (TXT 4Â kb)
DOI: 10.3535/dsz-w30-7xh
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kzp-mlb-6ft
title: Phascolosoma (Phascolosoma) vermiculum (Quatrefages, 1865)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/evg-n5b-sg8
title: Flaccisagitta hexaptera (d'Orbigny, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8g8-9zw-3nv
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c2m-80e-dky
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vp9-4s1-0se
title: Sagitta Quoy & Gaimard, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wg4-3ag-kr0
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/16s-dmf-c5v
title: Flaccisagitta hexaptera (d'Orbigny, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/an1-5vz-k81
title: Ficopomatus enigmaticus (Fauvel, 1923)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cvg-w5z-34n
title: Capitella capitata (Fabricius, 1780)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f04-8l6-vdw
title: Lanice conchilega (Pallas, 1766)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0qa-26z-qzh
title: Hydroides ancorispina Pillai, 1971 [original]

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w5h-4q5-593
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j9s-vw1-x00
title: Flabelligera affinis M. Sars, 1829

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y7l-qpm-2mz
title: Eunice tibiana (Pourtalès, 1867)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3613181_d1.v1
title: Additional file 2: of Fully immunized child: coverage, timing and sequencing of routine immunization in an urban poor settlement in Nairobi, Kenya

description: Median age of vaccination. Table S2a: Median age of vaccination (days) among non-FIC children aged 12–23 months. Table S2b: Median age of vaccination (days) among FIC children aged 12–23 months. (XLSX 17 kb)
DOI: 10.3535/7aq-g4n-9sh
title: Pseudochitinopoma occidentalis (Bush, 1905)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/acj-dba-yb1
title: Serratosagitta pseudoserratodentata (Tokioka, 1939)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hxx-254-hjj
title: Serratosagitta pseudoserratodentata (Tokioka, 1939)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wfg-ttt-p0c
title: Sagitta Quoy & Gaimard, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3613184_d1.v1
title: Additional file 17: Table S16. of DNA methylation analysis of paediatric low-grade astrocytomas identifies a tumour-specific hypomethylation signature in pilocytic astrocytomas

description: The differentially methylated CpG sites within de-regulated genes from the comparison between infratentorial pilocytic astrocytomas and normal cerebellum controls. 1_ Features of 11, 671 probes that are significantly differentially methylated in infratentorial pilocytic astrocytomas compared to published foetal and adult normal cerebellum datasets (averaged beta values with a difference of δβ ≥ 0.3, Benjamini-Hochberg corrected p-value &lt;0.05 [Lambert et al, Acta Neuropathologica 126:291-301, 2013]). 2_ Normalized log2 transformed expression analysis identifies differentially expressed genes between infratentorial pilocytic astrocytomas (n = 4) compared to normal cerebellum (n = 2, foetal and adult cerebellum). Genes that show fold change &gt;2 are highlighted. 3_ List of genes that have differential methylation (δβ ≥ 0.3) and differential gene expression (fold change &gt;2). (XLSX 4414 kb)
DOI: 10.3535/szq-8zw-na7
title: Solidosagitta planctonis (Steinhaus, 1896)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fs4-qbg-pvw
title: Serratosagitta pseudoserratodentata (Tokioka, 1939)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zcc-pf6-jar
title: Serratosagitta serratodentata (Krohn, 1853)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pe6-dj4-cp8
title: Sagitta Quoy & Gaimard, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3613184_d2.v1
title: Additional file 11: Table S10. of DNA methylation analysis of paediatric low-grade astrocytomas identifies a tumour-specific hypomethylation signature in pilocytic astrocytomas

description: Ingenuity Pathway Analysis (IPA) for genes associated with 315 differentially methylated sites in the test pilocytic and diffuse astrocytomas. 1_ The 185 genes that were directly associated with 217/315 CpG sites. Enhancers (grey) and CpG probes that are present within more than one gene (#) are highlighted. 2_ IPA analysis shows significant biological and disease categories which includes their functional annotations (p-value &lt;0.05), sorted by p-value. (XLSX 116 kb)
DOI: 10.3535/0hd-eee-gg1
title: Solidosagitta planctonis (Steinhaus, 1896)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m4n-tfn-kx8
title: Serratosagitta serratodentata (Krohn, 1853)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7lw-2at-gqn
title: Solidosagitta planctonis (Steinhaus, 1896)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z4s-xk0-6j9
title: Solidosagitta zetesios (Fowler, 1905)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3613181_d3.v1
title: Additional file 4: Table S3. of Fully immunized child: coverage, timing and sequencing of routine immunization in an urban poor settlement in Nairobi, Kenya

description: Proportion of children aged 12â  23Â months given vaccines more than 4 (14 for MV) days before the recommended age. The file shows children are receiving their vaccines earlier than recommended ages. (XLSX 10Â kb)
DOI: 10.3535/h1z-cla-vfb
title: Hydroides minax (Grube, 1878)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v1l-fb3-2s3
title: Lepidonotus squamatus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nr0-r5e-e5h
title: Cirratulus Lamarck, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nse-3rn-zxy
title: Hydroides panamensis Bastida-Zavala & ten Hove, 2003

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fbz-gjv-7sf
title: Heteromastus filiformis (Claparède, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3613181_d4.v1
title: Additional file 1: Table S1. of Fully immunized child: coverage, timing and sequencing of routine immunization in an urban poor settlement in Nairobi, Kenya

description: Proportion of fully immunized children by 12Â months of age by different background factors. The file lists the vaccination coverage of each antigen by different background characteristics for children aged 12-23 months. (XLSX 14Â kb)
DOI: 10.6084/m9.figshare.c.3613184_d3.v1
title: Additional file 5: Table S4. of DNA methylation analysis of paediatric low-grade astrocytomas identifies a tumour-specific hypomethylation signature in pilocytic astrocytomas

description: Normalized gene expression analysis for selected test tumours and controls. Expression analysis was performed using Affymetrix Human U133_plus2 arrays. Log-transformed expression values are shown for 18 tumour samples (10 diffuse astrocytomas and 8 pilocytic astrocytomas), and foetal and adult normal brain controls (foetal and adult diencephalon, cerebellum and cerebral cortex, adult medulla and thalamus). Affymetrix annotation is shown. Probes are ordered alphabetically according to the gene symbol. (XLSX 19307 kb)
DOI: 10.3535/3gw-0nl-7ve
title: Heteromastus filiformis (Claparède, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dbx-mfw-pag
title: Heteromastus filiformis (Claparède, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0q6-9ze-0gr
title: Lanice conchilega (Pallas, 1766)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g75-nrs-9rj
title: Lanice conchilega (Pallas, 1766)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/49g-86s-7zq
title: Hydroides minax (Grube, 1878)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gb5-jk5-vlr
title: Pseudovermilia multispinosa (Monro, 1933)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tyb-yyl-66p
title: Hydroides minax (Grube, 1878)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yrh-jnm-0p0
title: Hediste diversicolor (O.F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4nc-75y-bce
title: Hediste diversicolor (O.F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3613184_d5.v1
title: Additional file 7: Table S6. of DNA methylation analysis of paediatric low-grade astrocytomas identifies a tumour-specific hypomethylation signature in pilocytic astrocytomas

description: Three-way comparison of the test tumour set of pilocytic and diffuse astrocytomas with normal brain control tissue. 993 CpG probes are shown where the difference between the average beta values of pilocytic and diffuse astrocytomas, or between either of these and the control samples is equal to or greater than 0.3 (δβ ≥ 0.3, Benjamini-Hochberg corrected p-value &lt;0.05), assessed by MethLAB. Illumina annotation is included. (XLSX 436 kb)
DOI: 10.3535/4tf-zv1-0q1
title: Nephtys hombergii Savigny in Lamarck, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8c0-sk5-4gd
title: Aphrodita aculeata Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gqx-0pv-85v
title: Kinbergonuphis investigatoris (Fauvel, 1932)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3613184_d6.v1
title: Additional file 16: Table S15. of DNA methylation analysis of paediatric low-grade astrocytomas identifies a tumour-specific hypomethylation signature in pilocytic astrocytomas

description: Differential expression of AP-1 target genes in pilocytic astrocytomas compared to normal brain controls and diffuse astrocytomas. 1_ List of published AP-1 target genes [Eferl and Wagner, Nature Rev Cancer 3(11):853-868, 2003; Li et al, J Genet Genomics 38(6):235-242, 2011] and predicted AP-1 target genes identified in the 315 differentially methylated sites. 2_ Table showing AP-1 target genes that are differentially expressed in pilocytic astrocytomas compared to normal brain controls and diffuse astrocytomas. For each gene, methylation and expression status, plus the normalized log2 transformed expression values for each sample are included. The data is ordered by correlation with FOS expression (positive to negative correlation). The colour coordination shows which genes were taken from the three lists. (XLSX 101 kb)
DOI: 10.3535/gqa-1ak-p6a
title: Laetmonice malayana Horst, 1916

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h8f-2yz-hmj
title: Laetmonice malayana Horst, 1916

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/74a-dbj-zvj
title: Lepidonotus squamatus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3e4-7as-mxg
title: Magelona papillicornis F. Müller, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ly6-a87-arg
title: Spirobranchus maldivensis Pixell, 1913

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lpd-gkc-rl3
title: Nephtys hombergii Savigny in Lamarck, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ssc-f3m-c5a
title: Lepidonotus squamatus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fdd-k0l-see
title: Proteocephalus ambiguus (Dujardin, 1845) Weinland, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/smc-2wn-ndj
title: Alitta succinea (Leuckart, 1847)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/slv-xdz-cyf
title: Bipalium javanum Loman, 1883

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nqp-eeb-5vr
title: Spirobranchus polycerus (Schmarda, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pvm-xep-sd6
title: Eunice filamentosa Grube & Örsted in Grube, 1856

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7kx-0rw-7zh
title: Spirobranchus polycerus (Schmarda, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pnv-afe-se6
title: Eurythoe Kinberg, 1857

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wyq-2x3-ell
title: Girardia tigrina (Girard, 1850)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yt7-js2-na3
title: Bipalium muninense Kawakatsu, Sluys & Ogren, 2005

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4yh-0qk-x47
title: Hydroides caribensis ten Hove in Kupriyanova, Sun, Wong, & ten Hove, 2023

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3613241_d3.v1
title: MOESM5 of Network-based integration of molecular and physiological data elucidates regulatory mechanisms underlying adaptation to high-fat diet

description: Supplementary material 5 (CYS 55Â kb)
DOI: 10.3535/vlj-w0v-sg4
title: Semivermilia pomatostegoides (Zibrowius, 1969)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zv0-4y7-12w
title: Ficopomatus miamiensis (Treadwell, 1934)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/111-fyp-6sj
title: Pseudosagitta lyra (Krohn, 1853)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nht-vw1-ggw
title: Hydroides caribensis ten Hove in Kupriyanova, Sun, Wong, & ten Hove, 2023

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3613241_d4.v1
title: MOESM9 of Network-based integration of molecular and physiological data elucidates regulatory mechanisms underlying adaptation to high-fat diet

description: Supplementary material 9 (CYS 124Â kb)
DOI: 10.3535/29s-0s2-hxa
title: Pseudosagitta lyra (Krohn, 1853)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nt0-14b-c7b
title: Pseudovermilia fuscostriata ten Hove, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.