cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/n5r8p-y8c88
title: PW 1305

description: Pseudomonas aeruginosa strain PW 1305. Acquired from the Transposon mutant collection. (F7 CheW PW1305 phoAwp03q4D05).
description: <strong>Tilt Series Date:</strong> 2015-02-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: 10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Streak on LB plates and incubate overnight at 37°C- Inoculate 5 mL MOPS Minimal Media Limited Nitrogen from plate and grow at 30°C for ~24 hours</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-02-23-18/rawdata/</p>PseudomonasdeltaF7CheWTM0019.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-02-23-18/rawdata/PseudomonasdeltaF7CheWTM0019.mrc"
        > <i class="download icon"></i> Download </a></p>

        PseudomonasdeltaF7CheWTM0019_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-02-23-18/3dimage_52217/PseudomonasdeltaF7CheWTM0019_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/47h49-1xj60
title: E.coli minicell/Pul T2SS

description: grid box YWC252strain PAP5359 (minCDE knockout)Cells were grown on plate before freezing
description: <strong>Tilt Series Date:</strong> 2017-05-15</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain provided by Ingrid Guilvout in Olivera Francetic lab</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-05-15-41/rawdata/</p>20170515_YWC252b_10045.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-05-15-41/rawdata/20170515_YWC252b_10045.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170515_YWC252b_10045_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-05-15-41/3dimage_84592/20170515_YWC252b_10045_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.ay8g47
title: Occurrence Download

description: A dataset containing 27201 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Momordica charantia"
 ]
}

 The dataset includes 27201 records from 709 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044427-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/p28wp-ygd64
title: twitching Pseudomonas delta-pilH

description: Box YWC213delta-pilH hyperpiliated mutantCells incubated on mucin-coated grid to promote twitching
description: <strong>Tilt Series Date:</strong> 2016-06-01</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sample prepared in collaboration with Alex Persat</p>
  ycw2016-06-01-1_slicer19545.jpg: tip of T4P
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-06-01-1/rawdata/</p>20160531_YWC213_20001.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-06-01-1/rawdata/20160531_YWC213_20001.mrc"
        > <i class="download icon"></i> Download </a></p>

        20160531_YWC213_20001_part121_55.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-06-01-1/3dimage_75094/20160531_YWC213_20001_part121_55.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/4v5k1-tvg50
title: P41+P41

description: Raw data files of P41+P41
description: <strong>Tilt Series Date:</strong> 2016-03-15</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Edward Sheppard from Duncan Krause's lab prepared the cell culture</p>
  scy2016-03-15-18_slicer16778.jpg: attachment organelle scy2016-03-15-18_slicer16779.jpg: attachment organelle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2016-03-15-18/rawdata/</p>atlas10017.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2016-03-15-18/rawdata/atlas10017.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10017_full.rec,  Reconstruction (Pixel Size 1.56 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2016-03-15-18/3dimage_73612/atlas10017_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gfd0q-2k738
title: Vibrio cholerae PM6

description: C6706Z- ∆vca1088 (MCP uncat operon F7)
description: <strong>Tilt Series Date:</strong> 2015-07-07</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Simon Ringgaard</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-07-12/rawdata/</p>PM6July0008.mrc,  Tilt Series (Pixel Size 0.331 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-07-12/rawdata/PM6July0008.mrc"
        > <i class="download icon"></i> Download </a></p>

        PM6July0008_full.rec,  Reconstruction (Pixel Size 1.324 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-07-07-12/3dimage_58745/PM6July0008_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/w0q0e-hz842
title: Azospirillum Delta Operon 4

description: Raw data files of Azospirillum Delta Operon 4
description: <strong>Tilt Series Date:</strong> 2015-05-01</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Azospirillum brasilense</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Gladys Alexandre</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-01-6/rawdata/</p>DeltaOp4Day2May0001.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-01-6/rawdata/DeltaOp4Day2May0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        DeltaOp4Day2May0001.rec,  Reconstruction (Pixel Size 1.28 nm), 889.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-01-6/3dimage_56431/DeltaOp4Day2May0001.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/trsed-j4y58
title: M. xanthus PilY1.3-sfGFP

description: PilY1.3-sfGFP (SA7661+pMAT321)Grid box YWC262
description: <strong>Tilt Series Date:</strong> 2017-11-27</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-27-39/rawdata/</p>20171127_YWC262_10039.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-27-39/rawdata/20171127_YWC262_10039.mrc"
        > <i class="download icon"></i> Download </a></p>

        20171127_YWC262_10039.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-27-39/3dimage_90613/20171127_YWC262_10039.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.hpygkk
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Laurus nobilis",
 "Country is Georgia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 41 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044430-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/amhaf-cjt86
title: NR1769/R1-16 conjugation

description: Grid box YWC234
description: <strong>Tilt Series Date:</strong> 2016-12-08</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-2/3dimage_79850/</p>20161208_YWC234_10002_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-2/3dimage_79850/20161208_YWC234_10002_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20161208_YWC234_10002.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-2/rawdata/20161208_YWC234_10002.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/56j6j-j7739
title: NR1769/R1-16 conjugation

description: Grid box YWC234
description: <strong>Tilt Series Date:</strong> 2016-12-08</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-42/3dimage_79929/</p>20161208_YWC234_10042_part121_24.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-42/3dimage_79929/20161208_YWC234_10042_part121_24.rec"
        > <i class="download icon"></i> Download </a></p>

        20161208_YWC234_10042.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-12-08-42/rawdata/20161208_YWC234_10042.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.juqgkg
title: Occurrence Download

description: A dataset containing 712 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Anser anser"
 ]
}

 The dataset includes 712 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044429-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/vv4dj-b2d72
title: T9_wt

description: This was a wt sample prepared with Paul when he was visiting
description: <strong>Tilt Series Date:</strong> 2016-05-02</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -12.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Paul Veith and Eric Reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> See pages 84-86</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-05-02-2/rawdata/</p>atlas10073_mcorr.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-05-02-2/rawdata/atlas10073_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10073_mcorr.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-05-02-2/3dimage_74665/atlas10073_mcorr.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fr5tn-16018
title: Dflg

description: This is a flagellum mutant from Sahand (ATP connected) grown in serum bottle. We saw with perfusion setup that the same mutant makes nanowires. So I went back and imaged the serum bottle version just to make sure that it doesnt have nanowires.
description: <strong>Tilt Series Date:</strong> 2015-08-20</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Moh and Sahand</p>
<strong>Sample Preparation:</strong> same as before</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-08-20-28/3dimage_60973/</p>dflgwithnanowires_atlas10028_part61_1.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-08-20-28/3dimage_60973/dflgwithnanowires_atlas10028_part61_1.rec"
        > <i class="download icon"></i> Download </a></p>

        dflgwithnanowires_atlas10028.mrc,  Tilt Series (Pixel Size 0.6 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-08-20-28/rawdata/dflgwithnanowires_atlas10028.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/q1gyh-5bn79
title: Caulobacter del-tipN

description: delta-tipN (strain 5993)Grid box YWC266
description: <strong>Tilt Series Date:</strong> 2017-12-01</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Patrick Viollier</p>
  ycw2017-12-01-35_slicer19240.jpg: Flagella ycw2017-12-01-35_slicer19241.jpg: Chemoreceptor array
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-12-01-35/rawdata/</p>20171201_YWC266_10036.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-12-01-35/rawdata/20171201_YWC266_10036.mrc"
        > <i class="download icon"></i> Download </a></p>

        20171201_YWC266_10036_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-12-01-35/3dimage_90939/20171201_YWC266_10036_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16945606
title: Dataset for Manuscript: Impacts of the Three-dimensional Radiative Effects on Cloud Droplet Number Concentration Retrieval and Aerosol Cloud Interaction Analysis

description: This repository contains simulation data for the LES cases used for this study.  The full description is in the manuscript " Impacts of the Three-dimensional Radiative Effects on Cloud Droplet Number Concentration Retrieval and Aerosol Cloud Interaction Analysis " by Ademakinwa et al. 2025. The readme file for the data is in "Readme.txt".
DOI: 10.5281/zenodo.16945607
title: Dataset for Manuscript: Impacts of the Three-dimensional Radiative Effects on Cloud Droplet Number Concentration Retrieval and Aerosol Cloud Interaction Analysis

description: This repository contains simulation data for the LES cases used for this study.  The full description is in the manuscript " Impacts of the Three-dimensional Radiative Effects on Cloud Droplet Number Concentration Retrieval and Aerosol Cloud Interaction Analysis " by Ademakinwa et al. 2025. The readme file for the data is in "Readme.txt".
DOI: 10.22002/krj8f-pf521
title: Caulobacter del-tipN + Nal

description: delta-tipN (strain 5993)+ 20 mg/ml Nalidixic acid for 5hr
description: <strong>Tilt Series Date:</strong> 2017-11-30</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Patrick Viollier</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-30-3/rawdata/</p>20171130_YWC267_10003.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-30-3/rawdata/20171130_YWC267_10003.mrc"
        > <i class="download icon"></i> Download </a></p>

        20171130_YWC267_10003_part121_9.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.n83wmx
title: Occurrence Download

description: A dataset containing 568 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helicops danieli"
 ]
}

 The dataset includes 568 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044432-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.