cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48370/ofd/pcc2fv/9bl1pg
title: HMW_Centaurea_cyanus_L_H_2624.jpg

description: :unav
DOI: 10.48370/ofd/pcc2fv
title: Chaber bławatek (Centaurea cyanus L.), 2624

description: Herbarium
DOI: 10.48370/ofd/qdmhvk/97loqv
title: HMW_Centaurea_cyanus_L_H_2628.jpg

description: :unav
DOI: 10.48370/ofd/qdmhvk
title: Chaber bławatek (Centaurea cyanus L.), 2628

description: Herbarium
DOI: 10.48370/ofd/nmp8np/ad9mmc
title: HMW_Centaurea_cyanus_L_H_2626.jpg

description: :unav
DOI: 10.48370/ofd/nmp8np
title: Chaber bławatek (Centaurea cyanus L.), 2626

description: Herbarium
DOI: 10.48370/ofd/nblc1c/cowrrh
title: HMW_Centaurea_cyanus_L_H_0972.jpg

description: :unav
DOI: 10.48370/ofd/nblc1c
title: Chaber bławatek (Centaurea cyanus L.), 972

description: Herbarium
DOI: 10.6084/m9.figshare.14198978
title: Untitled Item

description: This data set is used to test the neural network, which works with RSN-MI proposed in this paper and the CNN-based classifier proposed in [18], The test set comprises various preprocessed IQ sequences. Due to the limitations of storage space, we extracted part of the data. The test set's size is 1000 samples for each modulation type, and the total number of samples is 6000 for each preprocessing method.
DOI: 10.6084/m9.figshare.14198978.v2
title: Untitled Item

description: This data set is used to test the neural network, which works with RSN-MI proposed in this paper and the CNN-based classifier proposed in [18], The test set comprises various preprocessed IQ sequences. Due to the limitations of storage space, we extracted part of the data. The test set's size is 1000 samples for each modulation type, and the total number of samples is 6000 for each preprocessing method.
DOI: 10.6084/m9.figshare.14198978.v1
title: Untitled Item

description: This data set is used to test the neural network, which works with RSN-MI proposed in this paper and the CNN-based classifier proposed in [18], The test set comprises various preprocessed IQ sequences. Due to the limitations of storage space, we extracted part of the data. The test set's size is 1000 samples for each modulation type, and the total number of samples is 6000 for each preprocessing method.
DOI: 10.48370/ofd/2bvduy/nsnec0
title: HMW_Centaurea_cyanus_L_H_0223.jpg

description: :unav
DOI: 10.48370/ofd/2bvduy
title: Chaber bławatek (Centaurea cyanus L.), 223

description: Herbarium
DOI: 10.20351/29gd19971117
title: MECA Cruise, RV García del Cid

description: MECA Cruise (29GD19971117) carried out on the Research Vessel García del Cid in 1997
DOI: 10.25345/c5d22p
title: MassIVE MSV000087034 - A systematic evaluation of semispecific peptide search parameter enables identification of previously undescribed N-terminal peptides and conserved proteolytic processing in cancer cell lines
title: Background: Liquid chromatography- tandem mass spectrometry (LC-MS/MS) has become the most commonly used technique in explorative proteomic research. A variety of open-source tools for peptide-spectrum matching have become available. Most analyses of explorative MS data are performed using conventional settings, such as fully specific enzymatic constraints. Here we evaluated the impact of the fragment mass tolerance as well as the enzymatic constraints on the performance of three search engines. Methods: The open-source search engines including Myrimatch, xTandem and MSGF+ were evaluated with regard to suitability for semi- and unspecific searches as well as the importance of accurate fragment mass spectra. Applying the most suited parameters we performed a semispecific reanalysis of the published NCI-60 deep proteome data. Results: Semi- and unspecific LC-MS/MS data analyses particularly benefit from accurate fragment mass spectra while this effect is less pronounced for conventional, fully specific peptide-spectrum matching. Search speed differed notably between the three search engines with regard to semi- and non-specific peptide-spectrum matching. Semi-specific reanalysis of NCI-60 proteome data revealed hundreds of previously undescribed N-terminal peptides, including cases of proteolytic processing or likely alternative translation start sites, some of which were ubiquitously present in all cell lines of the reanalyzed panel. Conclusions: Highly accurate MS2 fragment data in combination with modern open-source search algorithms facilitate the confident identification of semispecific peptides from large proteomic datasets. The identification of previously undescribed N-terminal peptides in published studies highlights the potential of future reanalysis and data mining in proteomic datasets. The converted .mzML files as well as the sequence databases for the different biological samples are provided. The analysis results are provided as compressed folders containing the results for multiple searches for each .mzML, e.g. using different enzymatic constraints as well as different fragment mass tolerance settings. The NCI-60 raw data from nine representative cancer cell lines was retrieved from https://www.proteomicsdb.org/proteomicsdb/#projects/35/258 and converted to the open mzML format using msconvert using default settings with an additional "metadataFixer" filter. Here we provide the sequence database file as well as the complete reanalysis as compressed galaxy history files which can be downloaded, extracted and imported on https://usegalaxy.eu.
DOI: 10.20351/29gd19980525
title: MATER-9 Cruise, RV García del Cid

description: MATER-9 Cruise (29GD19980525) carried out on the Research Vessel García del Cid in 1998
DOI: 10.48370/ofd/maibaj/h7hsgh
title: HMW_Centaurea_phrygia_L_H_6477.jpg

description: :unav
DOI: 10.48370/ofd/maibaj
title: Chaber austriacki (Centaurea phrygia L.), 6477

description: Herbarium
DOI: 10.48370/ofd/qiboka/1gp28r
title: HMW_Crepis_biennis_L_H_8604.jpg

description: :unav
DOI: 10.48370/ofd/qiboka
title: Pępawa dwuletnia (Crepis biennis L.), 8604

description: Herbarium
DOI: 10.5281/zenodo.4596541
title: SKELETAL MATURATION PREDICTIVE MODEL

description: the flawless treatment plan depends on precisely scoring of individual maturational stages. Geometrical and morphological evaluation of Cervical vertebras has offered a great potential to achieve the latter purpose. WE AIMED to develop multi-stage models based on logistic regression, which helped us to gain a highly accurate skeletal maturation determination. Moreover, the proposed methods can provide new grounds for other clinical multi-stage problems.
DOI: 10.5281/zenodo.4596540
title: SKELETAL MATURATION PREDICTIVE MODEL

description: the flawless treatment plan depends on precisely scoring of individual maturational stages. Geometrical and morphological evaluation of Cervical vertebras has offered a great potential to achieve the latter purpose. WE AIMED to develop multi-stage models based on logistic regression, which helped us to gain a highly accurate skeletal maturation determination. Moreover, the proposed methods can provide new grounds for other clinical multi-stage problems.
DOI: 10.48370/ofd/y5oqti/xvsbv3
title: HMW_Crepis_biennis_L_H_8500.jpg

description: :unav
DOI: 10.48370/ofd/y5oqti
title: Pępawa dwuletnia (Crepis biennis L.), 8500

description: Herbarium
DOI: 10.48370/ofd/x2hr1s/ltmwhe
title: HMW_Crepis_biennis_L_H_3537.jpg

description: :unav
DOI: 10.48370/ofd/x2hr1s
title: Pępawa dwuletnia (Crepis biennis L.), 3537

description: Herbarium
DOI: 10.48370/ofd/i8ydgk/zz3vb6
title: HMW_Crepis_biennis_L_H_6468.jpg

description: :unav
DOI: 10.48370/ofd/i8ydgk
title: Pępawa dwuletnia (Crepis biennis L.), 6468

description: Herbarium
DOI: 10.20351/29gd19980507
title: QUIMERA-2 Cruise, RV García del Cid

description: QUIMERA-2 Cruise (29GD19980507) carried out on the Research Vessel García del Cid in 1998
DOI: 10.48370/ofd/wghvtg/sdls9t
title: HMW_Crepis_biennis_L_H_2497.jpg

description: :unav
DOI: 10.48370/ofd/wghvtg
title: Pępawa dwuletnia (Crepis biennis L.), 2497

description: Herbarium
DOI: 10.5517/ccdc.csd.cc23grn0
title: CCDC 1950602: Experimental Crystal Structure Determination

description: Related Article: Yukihiro Yoshida, Mitsuhiko Maesato, Yuto Nakamura, Manabu Ishikawa, Hideki Yamochi, Gunzi Saito, Hideo Kishida, Hiroshi Kitagawa|2019|Inorg.Chem.|58|16703|doi:10.1021/acs.inorgchem.9b02814
DOI: 10.5517/ccdc.csd.cc23gyxg
title: CCDC 1950796: Experimental Crystal Structure Determination

description: Related Article: Yukihiro Yoshida, Mitsuhiko Maesato, Yuto Nakamura, Manabu Ishikawa, Hideki Yamochi, Gunzi Saito, Hideo Kishida, Hiroshi Kitagawa|2019|Inorg.Chem.|58|16703|doi:10.1021/acs.inorgchem.9b02814
DOI: 10.5517/ccdc.csd.cc23grp1
title: CCDC 1950603: Experimental Crystal Structure Determination

description: Related Article: Yukihiro Yoshida, Mitsuhiko Maesato, Yuto Nakamura, Manabu Ishikawa, Hideki Yamochi, Gunzi Saito, Hideo Kishida, Hiroshi Kitagawa|2019|Inorg.Chem.|58|16703|doi:10.1021/acs.inorgchem.9b02814
DOI: 10.48370/ofd/ysmlix/keqlcr
title: HMW_Cyperus_flavescens_L_H_3518.jpg

description: :unav
DOI: 10.48370/ofd/ysmlix
title: Paprotnica krucha (Cystopteris fragilis (L.) Bernh.), 3518

description: Herbarium
DOI: 10.48370/ofd/vuqvs7/i4iwht
title: HMW_Cyperus_flavescens_L_H_1539.jpg

description: :unav
DOI: 10.48370/ofd/vuqvs7
title: Paprotnica krucha (Cystopteris fragilis (L.) Bernh.), 1539

description: Herbarium
DOI: 10.48370/ofd/fvjnlc/seslu8
title: HMW_Cyperus_flavescens_L_H_7739.jpg

description: :unav
DOI: 10.48370/ofd/fvjnlc
title: Paprotnica krucha (Cystopteris fragilis (L.) Bernh.), 7739

description: Herbarium
DOI: 10.20351/29gd19980720
title: GIBRALTAR Cruise, RV García del Cid

description: GIBRALTAR Cruise (29GD19980720) carried out on the Research Vessel García del Cid in 1998
DOI: 10.5519/qd.fhkjg9jj
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (17092 records)
DOI: 10.20351/29gd19980922
title: LEA Cruise, RV García del Cid

description: LEA Cruise (29GD19980922) carried out on the Research Vessel García del Cid in 1998
DOI: 10.25392/leicester.data.12514622
title: GAKTpore: Stereological Characterisation Methods for Porous Metal Foams in Biomedical Applications- Data

description: In this work, a rapid, efficient, and accurate methodology for 2D bulk porous structure analysis and pore morphology classification is proposed. The algorithm, “GAKTpore”, creates a morphology map allowing visualisation of spatial feature variation, which enables optimisation of pore sizes/shapes/ranges/dispersion within any porous structure. The micrographs used in this study with their data outputted from the GAKTpore algorithm and below. Micrographs are stored as .tiff files and data is outputted and saved as a .CSV file.
DOI: 10.25392/leicester.data.12514622.v2
title: GAKTpore: Stereological Characterisation Methods for Porous Metal Foams in Biomedical Applications- Data

description: In this work, a rapid, efficient, and accurate methodology for 2D bulk porous structure analysis and pore morphology classification is proposed. The algorithm, “GAKTpore”, creates a morphology map allowing visualisation of spatial feature variation, which enables optimisation of pore sizes/shapes/ranges/dispersion within any porous structure. The micrographs used in this study with their data outputted from the GAKTpore algorithm and below. Micrographs are stored as .tiff files and data is outputted and saved as a .CSV file.
DOI: 10.25392/leicester.data.12514622.v1
title: GAKTpore: Stereological Characterisation Methods for Porous Metal Foams in Biomedical Applications- Data

description: In this work, a rapid, efficient, and accurate methodology for 2D bulk porous structure analysis and pore morphology classification is proposed. The algorithm, “GAKTpore”, creates a morphology map allowing visualisation of spatial feature variation, which enables optimisation of pore sizes/shapes/ranges/dispersion within any porous structure. The micrographs used in this study with their data outputted from the GAKTpore algorithm and below. Micrographs are stored as .tiff files and data is outputted and saved as a .CSV file.
DOI: 10.48370/ofd/ev6cao/hsf8f1
title: HMW_Cyperus_flavescens_L_H_4777.jpg

description: :unav
DOI: 10.48370/ofd/ev6cao
title: Paprotnica krucha (Cystopteris fragilis (L.) Bernh.), 4777

description: Herbarium
DOI: 10.48370/ofd/ylf9b3/nldzea
title: HMW_Cyperus_flavescens_L_H_3675.jpg

description: :unav
DOI: 10.48370/ofd/ylf9b3
title: Paprotnica krucha (Cystopteris fragilis (L.) Bernh.), 3675

description: Herbarium
DOI: 10.48370/ofd/npxcz4/1el5ch
title: HMW_Cyperus_flavescens_L_H_1948.jpg

description: :unav
DOI: 10.48370/ofd/npxcz4
title: Paprotnica krucha (Cystopteris fragilis (L.) Bernh.), 1948

description: Herbarium
DOI: 10.48370/ofd/hpssih/psabgm
title: HMW_Cyperus_flavescens_L_H_1389.jpg

description: :unav
DOI: 10.48370/ofd/hpssih
title: Paprotnica krucha (Cystopteris fragilis (L.) Bernh.), 1389

description: Herbarium
DOI: 10.20351/29gd19980515
title: FLUXALB-II Cruise, RV García del Cid

description: FLUXALB-II Cruise (29GD19980515) carried out on the Research Vessel García del Cid in 1998
DOI: 10.15129/efad4754-5aeb-45c0-99f2-bac7ce7858ed
title: Data for: "Combining Time of Flight and Photometric Stereo imaging for Surface Reconstruction of Discontinuous Scenes"

description: The dataset contains all the data used to produce the figures displayed in the paper. The data are organised as followed: one dataset for the sphere, the monkey head and the cube.Each dataset is uploaded under a .zip format where a Readme file can be found with an explanation of each dataset. In each case, the dataset is complex and is made available under a .mat format which can be read by an open source software, such as Octave.
DOI: 10.5281/zenodo.4584707
title: Focal-point approach with pair-specific cusp correction for coupled-cluster theory: supplementary material

description: this is a test release
DOI: 10.20351/29gd19981105
title: LLUÇET-I Cruise, RV García del Cid

description: LLUÇET-I  Cruise (29GD19981105) carried out on the Research Vessel García del Cid in 1998
DOI: 10.20351/29gd19980519
title: DOÑANA Cruise, RV García del Cid

description: DOÑANA Cruise (29GD19980519) carried out on the Research Vessel García del Cid in 1998
DOI: 10.17033/data.00000200
title: Weddell, Thomas D. and Yarin, Yury M. and Drexl, Markus and Russell, Ian J. and Elliott, Stephen J. and Lukashkin, Andrei N. (2014) A novel mechanism of cochlear excitation during simultaneous stimulation and pressure relief through the round window. Journal of The Royal Society Interface, 11 (93). p. 20131120. ISSN 1742-5689

description: The round window membrane (RW) provides pressure relief when the cochlea is excited by sound. Here we report measurements of cochlear function from guinea pigs when the cochlea was stimulated at acoustic frequencies by movements of a miniature magnet which partially occluded the RW. Maximum cochlear sensitivity, corresponding to subnanometer magnet displacements at neural thresholds, was observed for frequencies around 20 kHz, which is similar to that for acoustic stimulation. Neural response latencies to acoustic and RW stimulation were similar and taken to indicate that both means of stimulation resulted in the generation of conventional travelling waves along the cochlear partition. It was concluded that the relatively high impedance of the ossicles, as seen from the cochlea, enabled the region of the RW not occluded by the magnet, to act as a pressure shunt during RW stimulation. We propose that travelling waves, similar to those due to acoustic far-field pressure changes, are driven by a jet-like, near-field component of a complex fluid-pressure field, which is generated by the magnetically vibrated RW. Outcomes of research described here are theoretical and practical design principles for the development of new types of hearing aids, which utilise near-field, RW excitation of the cochlea.
description: This is covered in the Material and Methods of the paper
DOI: 10.17033/data.00000202
title: Burwood, George W. S. and Russell, Ian J. and Lukashkin, Andrei N. (2017) Rippling pattern of distortion product otoacoustic emissions evoked by high-frequency primaries in guinea pigs. The Journal of the Acoustical Society of America, 142 (2). pp. 855-862. ISSN 0001-4966

description: The origin of ripples in DPOAE amplitude which appear at specific DPOAE frequencies during f1 tone sweeps using fixed high frequency f2 (&gt;20kHz) in guinea pigs is investigated. The peaks of the ripples, or local DPOAE amplitude maxima, are separated by approximately half octave intervals and are accompanied by phase oscillations. The local maxima appear at the same frequencies in DPOAEs of different order and velocity responses of the stapes and do not shift with increasing levels of the primaries. A suppressor tone had little effect on the frequencies of the maxima, but partially suppressed DPOAE amplitude when it was placed close to the f2 frequencies. These findings agree with earlier observations that the maxima occur at the same DPOAE frequencies, which are independent of the f2 and the primary ratio, and thus are likely to be associated with DPOAE propagation mechanisms. Furthermore, the separation of the local maxima by approximately half an octave may suggest that they are due to interference of the travelling waves along the basilar membrane at the frequency of the DPOAE. It is suggested that the rippling pattern appears because of interaction between DPOAE reverse travelling waves with standing waves formed in the cochlea.
description: This is covered in the Material and Methods of the paper
DOI: 10.20351/29gd19980320
title: MATER-8 Cruise, RV García del Cid

description: MATER-8 Cruise (29GD19980320) carried out on the Research Vessel García del Cid in 1998
DOI: 10.5281/zenodo.4596550
title: Fifteen Years of HFC-134a Satellite Observations: Comparisons with SLIMCAT Calculations

description: This repository contains the model data from the paper "Fifteen Years of HFC-134a Satellite Observations: Comparisons with SLIMCAT Calculations" published in JGR. H134A_mm_T2Mz_60hlevs_651.nc : contains SLIMCAT zonal means of HFC-134a from 2000 to 2018. tomcat_slimcat_HFC134a_2004_2018_run651.dat : contains SLIMCAT profiles co-located with ACE-FTS measurements between 2004 and 2018. Each data entry contains the year, month, day, latitude, longitude, and beta angle of a single ACE-FTS observation (v4.0 processing) with the corresponding sixty-level SLIMCAT profile from 1 to 60 km.
description: This study was funded as part of the UK Research and Innovation Natural Environment Research Council's support of the National Centre for Earth Observation, contract number PR140015.
DOI: 10.5281/zenodo.4596549
title: Fifteen Years of HFC-134a Satellite Observations: Comparisons with SLIMCAT Calculations

description: This repository contains the model data from the paper "Fifteen Years of HFC-134a Satellite Observations: Comparisons with SLIMCAT Calculations" published in JGR. H134A_mm_T2Mz_60hlevs_651.nc : contains SLIMCAT zonal means of HFC-134a from 2000 to 2018. tomcat_slimcat_HFC134a_2004_2018_run651.dat : contains SLIMCAT profiles co-located with ACE-FTS measurements between 2004 and 2018. Each data entry contains the year, month, day, latitude, longitude, and beta angle of a single ACE-FTS observation (v4.0 processing) with the corresponding sixty-level SLIMCAT profile from 1 to 60 km.
description: This study was funded as part of the UK Research and Innovation Natural Environment Research Council's support of the National Centre for Earth Observation, contract number PR140015.
DOI: 10.6084/m9.figshare.14199119
title: Dataset.xlsx

description: Soil carbon and nitrogen storage along elevation across different studies
DOI: 10.6084/m9.figshare.14199119.v1
title: Dataset.xlsx

description: Soil carbon and nitrogen storage along elevation across different studies
DOI: 10.20351/29gd19981011
title: TOROS-IV Cruise, RV García del Cid

description: TOROS-IV Cruise (29GD19981011) carried out on the Research Vessel García del Cid in 1998
DOI: 10.20351/29gd19990928
title: NERIT-I Cruise, RV García del Cid

description: NERIT-I Cruise (29GD19990928) carried out on the Research Vessel García del Cid in 1999
DOI: 10.20351/29gd19981126
title: OBS Cuise, RV García del Cid

description: OBS Cruise (29GD19981126) carried out on the Research Vessel García del Cid in 1998
DOI: 10.48370/ofd/ub2dju/ubraww
title: HMW_Falcaria_vulgaris_Bernh_H_5556.jpg

description: :unav
DOI: 10.48370/ofd/ub2dju
title: Sierpnica pospolita (Falcaria vulgaris Bernh.), 5556

description: Herbarium
DOI: 10.48370/ofd/18nyci/ixcqja
title: HMW_Falcaria_vulgaris_Bernh_H_6742.jpg

description: :unav
DOI: 10.48370/ofd/18nyci
title: Sierpnica pospolita (Falcaria vulgaris Bernh.), 6742

description: Herbarium
DOI: 10.48370/ofd/osjsvq/seidtt
title: HMW_Falcaria_vulgaris_Bernh_H_4328.jpg

description: :unav
DOI: 10.48370/ofd/osjsvq
title: Sierpnica pospolita (Falcaria vulgaris Bernh.), 4328

description: Herbarium
DOI: 10.48370/ofd/6yemwt/qk2m9z
title: HMW_Falcaria_vulgaris_Bernh_H_3344.jpg

description: :unav
DOI: 10.48370/ofd/6yemwt
title: Sierpnica pospolita (Falcaria vulgaris Bernh.), 3344

description: Herbarium
DOI: 10.48370/ofd/axbzfk/v4d5nu
title: HMW_Falcaria_vulgaris_Bernh_H_2547.jpg

description: :unav
DOI: 10.48370/ofd/axbzfk
title: Sierpnica pospolita (Falcaria vulgaris Bernh.), 2547

description: Herbarium
DOI: 10.17632/mb25x9t4m7.1
title: iScience-S-21-00425, Xin, Deng

description: Original data and supplementary tables. iScience (2020), DOI: 10.2139/ssrn.3782778
DOI: 10.20351/29gd19980907
title: IMPACT-98 Cruise, RV García del Cid

description: IMPACT-98 Cruise (29GD19980907) carried out on the Research Vessel García del Cid in 1998
DOI: 10.17632/m2h6yg9nzp.4
title: Data for: In silico geometric and energetic data of all possible simple rotamers made of non-metal elements

description: Geometric and energetic features of halogenated rotamers of the following backbone structures, C-C, N-N, P-P, O-O, S-S, N-P, O-S, C-N, C-P, C-O, C-S, N-O, N-S, P-O and P-S from quantum chemical calculations are presented. The data set is considered to be comprehensive combinations of non-metal elements in the form abcx-ydef whereby a,b,c,d,e,f are halogen (fluorine to iodine), hydrogen or a lone pair and x,y are carbon, nitrogen, phosphorus, oxygen and sulfur. Preliminary work on all possible halogenation of methane, ammonia, phosphine, water and hydrogen sulfide are also included.
DOI: 10.17632/xkwscr7fwh.2
title: Parallel functional reduction in the mitochondria of apicomplexan parasites

description: (1) Phylogenomics tree matrix, (2) mitochondrial metabolic protein alignments and individual phylogenies, and (3) transcriptome assemblies generated in this study.
DOI: 10.17632/5f2szm73s7.2
title: Dataset for the Life Cycle Assessment of the High Speed Rail network in Spain

description: A life cycle assessment (LCA) of the entire high speed rail (HSR) network in Spain was completed. Life cycle inventory (LCI) data related to the construction and maintenance phases of the infrastructure was collected using Google Earth tool, and complemented with data obtained from other LCA studies. LCI data associated with the operation phase of the infrastructure was built on available fragmentary data on passenger movements for the year 2016, processed with a python algorithm to estimate the transport service provided by the infrastructure. Environmental impacts for transport modes were obtained from Ecoinvent v3.7 database and processed with openLCA software. Life cycle impact assessment (LCIA) results gathered in the dataset include Global Warming (GWP100a), Cumulative Energy Demand and total emissions for PM10, SO2, NOX and NMVOC. This dataset presents a detailed description of the Spanish HSR network, including the length of each item (bridges, tunnels, earthworks, railway tracks), and a robust estimation of passenger transport over the infrastructure for year 2016.