cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5128828.v1
title: Supplementary Material for: Inhibitory Effects of Zinc Ions on Enamel Demineralisation Kinetics in vitro

description: Metal ions including zinc have the ability to influence enamel demineralisation. However, there is a paucity of data regarding reductions in demineralisation effected by zinc ions (Zn<sup>2+</sup>) in the literature. Therefore the aim was to measure the effects of zinc ion concentration ([Zn<sup>2+</sup>]) on the real-time in vitro demineralisation of enamel, during exposure to caries-simulating conditions, using scanning microradiography (SMR). Human enamel blocks were fixed in SMR environmental cells, through which acidic solutions (0.1 M acetic acid, pH 4.0) were circulated for periods of 50 h. SMR was used to quantitatively measure continuous mineral mass loss. Subsequently, the effects of sequentially increasing [Zn<sup>2+</sup>] (0.1-3,565 ppm) in the acidic solutions were measured on the rate of enamel demineralisation. This study demonstrated that Zn<sup>2+</sup> even at low concentrations significantly reduces enamel demineralisation. There was a log-linear relationship between the mean percentage reduction in demineralisation and increasing [Zn<sup>2+</sup>] up to 3,565 ppm, i.e. the change in the overall percentage reduction in demineralisation was greater at lower concentrations than at higher concentrations, with 60% reduction at 36 ppm increasing to 90% at 3,565 ppm. In conclusion, SMR demonstrated the ability of Zn<sup>2+</sup> to reduce the rate of enamel demineralisation under real-time in vitro acid conditions simulating dental caries. The results suggest that Zn<sup>2+</sup> in the oral fluids could protect against enamel demineralisation during an acidic challenge. The log-linear relationship between [Zn<sup>2+</sup>] and demineralisation suggests that the reduction in enamel dissolution is limited by the saturation of surface sites on the enamel surface.
DOI: 10.17632/jf4mrwrxr7
title: KIDINS220 and InsP8 safeguard the stepwise regulation of phosphate exporter XPR1

description: XPR1 is emerging as the only known inorganic phosphate (Pi) exporter in humans, critical for Pi homeostasis, with its activity stimulated by inositol pyrophosphate InsP8 and regulated by neuronal scaffold protein KIDINS220. Our structural studies reveal InsP8 specifically activates XPR1 in a stepwise manner, involving profound SPX domain movements. Each XPR1 subunit functions with four gating states, in which Pi permeates a constriction site via a “knock-kiss-kick” process. In contrast, KIDINS220 delicately stabilizes XPR1 in a closed conformation through multiple mechanisms, one of which involves trapping the XPR1 α1 helix—critical for InsP8 binding—within an interaction hub. InsP8 serves as a key to release KIDINS220's restraint, reinforcing a “key-to-locks” mechanism to safeguard the stepwise activation. Additionally, our study provides direct structural insights into XPR1-associated neuronal disorders and highlights the evolutionary conservation and divergence among XPR1 orthologues, offering a comprehensive understanding of Pi homeostasis across species.
DOI: 10.17632/jgcb7m7wwv
title: SLIMP 2.0: A new version of strong laser interaction model package for atoms and molecules, now with molecular orbital tomography based on high-order harmonic spectra

description: A new version of strong laser interaction model package for atoms and molecules is presented. Its capacities are enhanced by incorporating modules related to molecular orbital tomography (MOT) in length and velocity forms based on high-order harmonic spectra (HHS). This advanced package enables two-dimensional and three-dimensional MOT of both symmetric and asymmetric molecules using HHS, providing an efficient means for both experimental and theoretical investigations of molecular orbital structures. In addition, it can calculate the precise theoretical orbitals corresponding to those reconstructed by MOT. Furthermore, the package can calculate the transition dipole moment (TDM) in the plane wave approximation and allow for reference MOT based on TDM. It can evaluate the quality of reconstructed orbitals based on HHS and reveal the physical and numerical effects on MOT. This package is suitable for MOT under conditions of driving laser at different intensities and wavelengths, and can be applied to different molecules with various structures. It is designed to facilitate easy expansion for additional capabilities.

The previous version of this program (AEWE_v1_0) may be found at https://doi.org/10.1016/j.cpc.2015.02.031.
DOI: 10.17632/rck762c7gt
title: Mediterranean diet in OCTD

description: Raw data of the paper "Higher adherence to the Mediterranean diet is associated with reduced tics and obsessive-compulsive symptoms: A series of nine boys with Obsessive-Compulsive Tic Disorder", which was published by the Journal of Nutrition Clinique et Métabolisme in 2019. We presented a series of 9 boys with OCTD from Italy whose unhealthy food habits were corrected through nutritional counseling. The education focused on promoting a balanced diet through non-specific Mediterranean dietary advices. After one month, YGTSS (Yale Global Tic Severity Scale) and Y-BOCS (Yale-Brown Obsessive Compulsive Scale) scored a significant reduction, but the quality of life diminished.
DOI: 10.17632/shs5b4z32n
title: Exotic Fruits Image Quality Dataset (EFIQD)

description: The Exotic Fruit Image Quality Dataset (EFIQD) is an invaluable resource comprising meticulously curated images showcasing a diverse selection of exotic fruits, including Avocado, Golden Kiwi, Green Apple, Mangosteen, Rambutan, and Red Dragon Fruit. Total 22110 images present in this dataset.
DOI: 10.6084/m9.figshare.2056602.v1
title: Werth & Potvin balaenid cross flow data files.xlsx

description: data from baleen tissue
DOI: 10.17632/8ryh36533m
title: Dataset: Handling decision-making in Intuitionistic Fuzzy environment: PyIFDM package

description: Dataset from Handling decision-making in Intuitionistic Fuzzy environment: PyIFDM package
DOI: 10.17632/n5s62h3zzc
title: Abid lab research data for article named: Optimization of mito-roGFP protocol to measure mitochondrial oxidative status in human coronary artery endothelial cells

description: This dataset provides useful information for researchers planning to standardize the mito-roGFP protocol in their labs. To better understand this data, we suggest using the notebook notes as a guide to visualize the original .nd2 file and excel graph report. Alternatively, a summary of graph reports for each day and sample is provided as a .pptx file and can be visualized along with the notebook notes for a clear understanding of hydrogen peroxide optimization procedures. This data was obtained from a culture of HCAEC at passage 3. Note: .nd2 files can be visualized with the free version of NIS Elements software.
DOI: 10.17632/tgv3zb82nd
title: JMuBEN2

description: Datasets were taken from Arabica coffee plantation using a camera and with the help of a plant pathologist. The images were then cropped to focus on the region of interest . Image augmentation was done with the aim of increasing the dataset size and preventing over-fitting problems during model training and validation. The images are in different folders containing annotated images of healthy and Miner
DOI: 10.25390/caryinstitute.14799018.v2
title: Data: Estimates of wildlife species richness, occupancy, and habitat preference in a human-impacted landscape in New York State

description: Full community matrices for three seasons of camera trapping. Individual count matrices for each species identified each season. Covariate data for study neighborhoods and meta data.The [species common name]_[season].csv sheets are count data matrices from our camera traps. Each row represents an independent camera location and each column represents a unique date from our camera trap season. Note: many of the data sheets contain mostly or all zeroes, indicating that the species of interest was not detected.
DOI: 10.17632/hngxj3crgz
title: Base de dados: uma análise no campo da educação militarizada: o que dizem as teses e dissertações?

description: Os dados apresentados são oriundos de uma Revisão Sistemática da Literatura, cujo objetivo central foi identificar e analisar teses e dissertações publicadas ao longo dos últimos 25 anos, abrangendo, portanto, um estudo que se debruçou sobre trabalhos publicados entre 1999 e 2024. A intenção foi elaborar um panorama sobre como essas teses e dissertações interpretam o programa de militarização da educação pública básica. Em resumo, o que as investigações revelam acerca desse programa.
DOI: 10.17632/8wj4kdmhc4
title: Text and Dynamic-Network Analysis for Measuring Technological Convergence: A Case Study on Defence Patent Data - Appendixes

description: Appendixes for paper "Text and Dynamic-Network Analysis for Measuring Technological Convergence: A Case Study on Defence Patent Data" on IEEE Transactions of Engineering Management
DOI: 10.17632/pht2hnsg6w
title: Cut-flower Multi label classification dataset

description: Multi label classification is a classification that solve the problem of availabilty of more than disease at once. so the cut flower disease was collected at the field by camera of 64mpx and labeled or annotated by the pathologist.
DOI: 10.17632/8tgk5799k7
title: Distributions and Trends of the Aerosol Direct Radiative Effect in the 21st Century: Aerosol and Environmental Contributions

description: This dataset contains our processed climatological mean Aerosol Direct Radiative Effect (ADRE) and its trend.
DOI: 10.17632/ng6zmxt4n4
title: Manually collected Citation Context Datasets from moderately cited Biomedical Publications
DOI: 10.6084/m9.figshare.14700588.v1
title: Pliocene to Early Pleistocene drainage reorganization in eastern Tibet inferred from detrital zircons

description: Pliocene to Early Pleistocene drainage reorganization in eastern Tibet inferred from detrital zircons
DOI: 10.6084/m9.figshare.29196074.v1
title: Data for: "Successful first rehabilitation and release of an endangered Ethiopian wolf"

description: GPS data received from the satellite collar placed on an Ethiopian wolf that was successfully rehabilitated and released back in the Simien Mountains (named "Terefe"). The GPS collar was programmed to acquire fixes every hour and equipped with a drop-off system set to release after 32 weeks. Data is owned by the Ethiopian Wolf Conservation Programme (University of Oxford) and should not be used without explicit permission. Contact person: Dr. Jorgelina Marino, email: jorgelina.marino@biology.ox.ac.uk
DOI: 10.17632/49z3vydmwk
title: qocttools: A program for quantum optimal control calculations

description: The qocttools code performs optimization calculations on quantum systems using optimal control theory. The problem that it solves is the following: given a system governed by a Hamiltonian whose precise form can be tuned through the variation of some control parameters, and given a user-defined merit function of the system trajectory, what are the values of those parameters that lead to the time evolution that maximizes the merit function? The code permits to work on generic systems, and uses either Schrödinger's or Lindblad's equation in order to deal with closed or open systems, respectively. It may also use the tools of Floquet formalism when dealing with periodic perturbations. It is written in Python, and the user can interface with it by preparing driver Python scripts that define the model, and load the appropriate qocttools modules. It is open and free software, and also relies on open and free widely used libraries and packages, such as QuTiP (to handle the quantum model definition and manipulation), and NLopt (to perform the optimizations).
DOI: 10.17632/v298yynynv
title: Data for: Determining payments for watershed services by hydro-economic modeling for optimal water allocation between agricultural and municipal water use

description: The supplementary material describes a Payments for Watershed Services modeling exercise between agricultural and municipal water use. The data collection and processing was conducted as part of the Peru-Aquafutura study funded by the Academy of Finland [grant number 250529].
DOI: 10.17632/wpjg89zz5v
title: G7 in Africa

description: I used this data to apply a system-GMM approach and investigate the impact of G7 trade policies on economic development in Africa. The results suggest that both economic growth and human development have been positively affected by G7 trade shares.
DOI: 10.17632/bpb7ftw7jv
title: Intra- and postoperative complications in patients with hypertension who attended the Dr René Puig Bentz Dental Clinic of the Universidad Nacional Pedro Henríquez Ureña.

description: Clinical complications, in general, cause anxiety and panic. High blood pressure is recognized as a silent adversary that causes an increase in blood pressure. In dentistry, specifically in the area of surgery, it is important to establish good management of systemically compromised patients, especially in the case of hypertensive patients or those with elevated blood pressure, to avoid life-threatening complications. The main objective of this research was to determine intra and postoperative complications in patients with elevated blood pressure who attended the surgery area of the Dr. Rene Puig Bentz dental clinic of the UNPHU. The research approach was descriptive and observational, with a cross-sectional design and a sample of 108 patients who represent 100% of the cases evaluated. As a result of a sample of 108 patients (100%), we obtained 80.6% of intraoperative complications and 19.4% of the cases did not present intraoperative complications. In postoperative complications, 17.6% presented complications and 82.4% of the cases did not present. In conclusion, the results revealed that complications during surgery were more frequent than those after surgery.
DOI: 10.17632/p3jbhcvrvt
title: CT data (tiffstack) of Pygmaclypeatus daziensis (YKLP 11428)

description: Original CT data of YKLP 11428
DOI: 10.6084/m9.figshare.7658399.v1
title: 2018GL081828R_data: Evolution of radiation belt electron pitch angle distribution due to combined scattering by plasmaspheric hiss and magnetosonic waves

description: 1. Wave-induced Diffusion CoefficientsThe data of electron bounced-averaged pitch angle, mixed, and momentum diffusion coefficients under the impacts of hiss with wave amplitude of 10 pT shown in Figure 1 is given in '\2018GL081828R_data\wave_induced_diffusion_coefficients\hiss\' by ‘Daa_hiss10pT_L4_modest_interp.txt’, ‘Dap_hiss10pT_L4_modest_interp.txt’, ‘Dpp_hiss10pT_L4_modest_interp.txt’. Similarly, the data of electron bounced-averaged pitch angle, mixed, and momentum diffusion coefficients under the impacts of magnetosonic (MS) waves is given in '\2018GL081828R_data\wave_induced_diffusion_coefficients\MS waves\' by ‘Daams_Interp_XXpT.txt’, ‘Dapms_Interp_XXpT.txt’, ‘Dppms_Interp_XXpT.txt’. The combined scattering rates shown in Figure 1 under the impact of hiss and MS waves can be obtained by summing the individual diffusion coefficients by hiss and MS waves. The data format of electron diffusion coefficients is 101 Lines × 1001 Columns. The lines are equatorial pitch angles, from 0.0 deg to 90.0 deg with a step of 0.9 deg (please see PitchAngle_101.txt). The columns are electron kinetic energies, from 10 keV to 10 MeV, in total 1001 energies (please see Energy_1001.txt). 2. The Input Settings for PSD SimulationsThe initial electron PSD distribution for the input of electron phase space density (PSD) simulations is given in '\2018GL081828R_data \PSD_simulations\ ' by ‘PSDt0_10k_10M_1001E_101PA’, whose data format is the same as the wave-induced diffusion coefficients. 3. The Results of PSD SimulationsNumerical results of electron PSDs evolution day under the impact of hiss, MS waves, and combined scattering corresponding to Figure 2- 5 in the main text and Figure S1-S5 in the supporting information are given in '\2018GL081828R_data\PSD_simulations\Simulated_results\CBscattering_hissXX_MS_YY\' respectively, where "XX" and “YY” can be replaced by 0, 10, 20, … 150, which represents the wave amplitude of hiss and MS waves respectively. The 1-day simulated results are save every 5 min, for example, “t001_PSD.txt" corresponds to the electron PSDs at Δ_t = 5 min. Especially, the results shown in the Figure S2a are given in '\2018GL081828R_data\PSD_simulations\Simulated_results\CBscattering_hiss10_MS_10_25D\'. The 25-day simulated results are save every 1 hour, for example, “t001_PSD.txt" corresponds to the electron PSDs at Δ_t = 1 hour. The data format of "tXXX_PSD.txt" is 1001 Lines ×101 Columns. The lines are electron kinetic energies, from 10 keV to 10 MeV, in total 1001 energies (please see Energy_1001.txt). The columns are equatorial pitch angles, from 0.0 deg to 90.0 deg with a step of 0.9 deg (please see PitchAngle_101.txt).
DOI: 10.6084/m9.figshare.939373.v3
title: IDL routine to compute BANYAN II field contamination probabilities

description: Computes the probability that a given candidate member to a nearby, young moving association (NYA) originates from the field distribution, according to the Monte Carlo analysis presented in Gagné et al. (2014). Please cite this reference when using this routine. All required IDL Data files (.sav format) are also included here.
DOI: 10.17632/pwprmck9h5
title: Sugar Cane - Spittle Bug

description: This data set provides 12,000 images for individual pest bugs in sugar cane crops, collected from pictures taken in yellow square traps on field, which are used to monitoring the pest presence and population. Data set is divided half for special bug of interest, spittle bug (Aeneolamia varia) which will be the True data set, and half for other insects in the trap which will be the False Data set. The data set is useful but not only, to train Convolutional Neural Networks – CNN, for binary classification (True/False). Data set images are in different sizes.
DOI: 10.6084/m9.figshare.647335.v1
title: CIL:43405

description: Wound Healing Assay Time series DIC images of mouse DA3 cells, derived from the mouse mammary adenocarcinoma cell line D1-DMBA-3, induced in BALB/C mice by dimethylbenzanthracene were grown to 90% confluence. A scratch approximately 300um wide was made in the cell monolayer, and images were recorded every 14.5 min for 26 hr. This time series image, obtained with HGF/SF treatment, is part of a group of 17 time series images (CIL:43401 to CIL:43417) representing three different treatments: (1) no HGF/SF (CIL:43406 to CIL:43411), (2) with HGF/SF (CIL:43401 to CIL:43405), activating HGF/SF-Met signaling, and (3) with PHA (Met inhibitor) and HGF/SF (CIL:43412 to CIL:43417). The group also includes two movies (CIL:43418 and CIL:43419) created from the time series CIL:43402 and CIL:43406 respectively.
DOI: 10.17632/bymz6hdsfh
title: Datasets for HGS paper

description: Here are the 143 datasets in "arff" format used in the HGS paper.
DOI: 10.17632/cxg62pgr2y
title: ASPIN: An all spin scattering code for atom–molecule rovibrationally inelastic cross sections

description: Abstract We present in this work a new computational code for the quantum calculation of integral cross sections for atom-molecule (linear) scattering processes. The atom is taken to be structureless while the molecule can be in its singlet, doublet, or triplet spin states and can be treated as either a rigid rotor or a rovibrational target. All the relevant state-to-state integral cross sections, and their sums over final states, can be calculated with the present code, for which we also describe in ... Title of program: ASPIN Catalogue Id: AEBO_v1_0 Nature of problem Scattering of a diatomic molecule in its 1 Σ, 2 Σ, or 3 Σ spin states with an atom in its 1 S state. Partial and integral cross sections. Versions of this program held in the CPC repository in Mendeley Data AEBO_v1_0; ASPIN; 10.1016/j.cpc.2008.07.017 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.6084/m9.figshare.16622536.v3
title: Supplementary materials for "Prevalence norms for 40,777 Catalan words: An online megastudy of vocabulary size"

description: These are the supplementary materials for "Prevalence norms for 40,777 Catalan words: An online megastudy of vocabulary size".
DOI: 10.6084/m9.figshare.22777052.v1
title: Genomic, functional and structural analyses elucidate evolutionary innovation within the sea anemone 8 toxin family

description: Supplementary files for genomic, transcriptomic and proteomic datasets from sea anemone species <em>Actinia tenebrosa</em> and <em>Telmatactis stephensoni</em>. This includes genome annotations (gff3) for all genes, putative venom genes and sea anemone 8 (SA8) toxin family genes. Sequences are also provided for protein CDS (.aa), nucleotide CDS (.cds) and mRNA transcripts (.fasta). Genomes for <em>A. tenebrosa</em> and <em>T. stephensoni</em> were produced using combination of PacBio long-read (PacBio) and short-read (Illumina) DNA sequencing. Additionally, Hi-C sequencing (Phase Genomics) was performed to generate a chromosomal-level assembly for <em>A. tenebrosa.</em> This also includes alignment files (fasta) used for CAFE, sequence space and phylogenetic analyses: CAFE expansion/contraction tree highlights increased number of expanded gene families <em>in T. stephensoni</em> relative to other sea anemone species. Sequence space of the SA8 family was generated using 102 mature SA8 sequences from 14 actiniarian species spanning three superfamilies. Phylogenetic relationships among 71 sea anemone sequences from the SA8 gene family were inferred under maximum likelihood in IQ-TREE. Sequence space of the SA8 family and ShkT-domain containing sequences (ShK-like proteins, cysteine-rich secretory proteins).
DOI: 10.6084/m9.figshare.24190347.v1
title: Data Supplements

description: These are supplementary materials associated with this paper. The Open Research section of the main paper and supplements describe the files contents.
DOI: 10.6084/m9.figshare.29032199.v1
title: Food preparations completed by Shawi Indigenous Families in the Peruvian Amazon

description: Data were collected between February and June 2021 to investigate the diet among Shawi Indigenous communities in the Balsapuerto District, Loreto region, located on the eastern slopes of the northern Peruvian Amazon. Four families were invited to participate, and each family prepared seven food preparations. These preparations are described in terms of their ingredients, frequency of consumption, and the family members who typically consume them.<br>
DOI: 10.17632/btr3pxb648
title: Exploring Consumer Behavior Determinants in LMICs_Appendix B_Literature review table

description: Exploring Consumer Behavior Determinants in Low- and Low-Middle-Income Countries: Drivers and Barriers for Plant- and Animal-Based Protein Consumption 

Abstract 
Balancing plant- and animal-based protein consumption is crucial for individual health and environmental well-being. In this systematic literature review, we investigated the behavioral determinants influencing consumption of protein-rich foods (animal-based foods, legumes, and pulses) in low- and lower-middle-income countries. From 1,614 initial studies, 127 were selected for in-depth analysis, extracting article information, study characteristics, and behavioral determinants categorized using the COM-B model and Theoretical Domains Framework. Results showed that most studies included determinants related to motivation (e.g., sensory characteristics, health, and price) and opportunity (e.g., availability and access), with capability less frequently studied. Meat and fish were the most studied food groups, while legumes were less frequently addressed. The vast majority of studies were conducted in Sub-Saharan Africa. These findings highlight the need for more research on the determinants of plant-based protein choices and capability factors to better inform policies and interventions that promote healthy and sustainable food consumption.