cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24637866.v1
title: A conformal mapping approach to broadband nonlinear optics on chip

description: The data supports broadband nonlinear frequency conversion on LNOI chip that derived from a conformal mapping approach.
DOI: 10.6084/m9.figshare.20101109
title: Ginsenoside Rg3 and sorafenib combination therapy relieves the hepatocellular carcinomaprogression through regulating the HK2-mediated glycolysis and PI3K/Akt signaling pathway

description: Hepatocellular carcinoma (HCC) is the most common pathological type of primary hepatic carcinoma. This study investigated the effects of ginsenoside Rg3 (Rg3) and sorafenib (SFN) combination therapy on HCC progression. The HCC-related data were obtained from TCGA database, and the data of HK2 mRNA, clinicopathological features, and survival outcomes were extracted using R Programming 4.0. The human hepatoma cell lines HepG2 and Bel7404 were used. Cell viability was tested using the MTT assay. Glucose consumption and lactate levels of HCC cells were detected using the corresponding kits. Western blotting was used to determine the protein expression of HK2, PI3K, and Akt. HK2 was overexpressed in patients with HCC. Compared with patients with overexpressed HK2, those with low levels of HK2 achieved a longer survival time. In addition, the Rg3 and SFN combination therapy significantly reduced cell viability, glucose consumption, lactate levels, and protein expression of HK2, PI3K, and Akt in HCC cells. Additionally, the Rg3 and SFN combination therapy exhibited a better effect than the single drug group. Inhibition of the PI3K/Akt signaling pathway or exogenous lactate intervention reversed the effects of Rg3 and SFN combination therapy in HCC cells. In conclusion, Rg3 has a synergistic effect on the sensitivity of HepG2 and Bel7404 hepatoma cells to SFN, which is related to HK2-mediated glycolysis and the PI3K/Akt signaling pathway.
DOI: 10.57754/fdat.08h77-abm28
title: The Tübingen Interdisciplinary Corpus of Ambiguity Phenomena (TInCAP)

description: The Tübingen Interdisciplinary Corpus of Ambiguity Phenomena is a collection of examples and annotations of ambiguities from an interdisciplinary perspective. The annotations make it possible to (i) compare ambiguous examples from various different disciplines including linguistics, literary studies, rhetoric, law, theology, media studies and others, based on the research agenda of the graduate school GRK 1808: "Ambiguity: Production and Perception".
Publications: Hartmann, Jutta M., Corinna Sauter, Gesa Schole, Wiltrud Wagner, Peter Gietz, and Susanne Winkler (2016). "TInCAP – ein interdisziplinäres Korpus zu Ambiguitätsphänomenen." Konferenzabstract Leipzig, DHd 2016. 461–63. https://doi.org/10.5281/zenodo.3679331
Hartmann, Jutta M., Lisa Ebert, Gesa Schole, Wiltrud Wagner & Susanne Winkler. 2023. Annotating Ambiguity Across Disciplines: The Tübingen Interdisciplinary Corpus of Ambiguity Phenomena (TInCAP). In Matthias Bauer & Angelika Zirker (eds.), Strategies of ambiguity (Routledge studies in twentieth century literature), 322-. New York NY: Routledge. doi des Buches: https://doi.org/10.4324/9781003298083
DOI: 10.6084/m9.figshare.12757435
title: Additional file 4 of Establishment and characterization of breast cancer organoids from a patient with mammary Paget’s disease

description: Additional file 4: Data S2. The somatic mutations of the organoids.
DOI: 10.6084/m9.figshare.16955724
title: Genetic identification of a major, novel and stably expressed QTL for effective tiller number from tetraploid wheat

description: Effective tiller number (ETN) is an important factor affecting plant architecture and wheat yield. The reduction of genetic diversity in common wheat breeding forces us to explore new genetic resources for ETN from wheat related species to increase wheat yield. Here, a tetraploid wheat recombinant inbred line (RIL) population developed from the cross between a durum and a wild emmer accession was used to construct a genetic map using the wheat 55 K single nucleotide polymorphism (SNP) array. The map contained 1154 SNP markers with a total length of 2452.79 cM and an average density of 2.13 cM/marker. Quantitative trait locus (QTL) analysis identified a major and stably expressed QTL, <i>Qetn-DW-4B.1</i> for ENT, explaining 12.40–15.25% of the phenotypic variation. The favorable allele of this QTL was from wild emmer wheat and physically mapped in a 2.25 Mbp interval of 4BL containing 23 genes among which several were likely related to tiller development. Further comparison with previous studies showed that <i>Qetn-DW-4B.1</i> is likely a novel QTL. Genetic associations between ETN and other agronomic traits were also analyzed. Collectively, this study reported a major QTL for ENT from related species and lays a foundation to fine mapping and further wheat molecular breeding. Supplemental data for this article is available online at https://doi.org/10.1080/13102818.2021.1996271 .
DOI: 10.6084/m9.figshare.16955724.v1
title: Genetic identification of a major, novel and stably expressed QTL for effective tiller number from tetraploid wheat

description: Effective tiller number (ETN) is an important factor affecting plant architecture and wheat yield. The reduction of genetic diversity in common wheat breeding forces us to explore new genetic resources for ETN from wheat related species to increase wheat yield. Here, a tetraploid wheat recombinant inbred line (RIL) population developed from the cross between a durum and a wild emmer accession was used to construct a genetic map using the wheat 55 K single nucleotide polymorphism (SNP) array. The map contained 1154 SNP markers with a total length of 2452.79 cM and an average density of 2.13 cM/marker. Quantitative trait locus (QTL) analysis identified a major and stably expressed QTL, <i>Qetn-DW-4B.1</i> for ENT, explaining 12.40–15.25% of the phenotypic variation. The favorable allele of this QTL was from wild emmer wheat and physically mapped in a 2.25 Mbp interval of 4BL containing 23 genes among which several were likely related to tiller development. Further comparison with previous studies showed that <i>Qetn-DW-4B.1</i> is likely a novel QTL. Genetic associations between ETN and other agronomic traits were also analyzed. Collectively, this study reported a major QTL for ENT from related species and lays a foundation to fine mapping and further wheat molecular breeding. Supplemental data for this article is available online at https://doi.org/10.1080/13102818.2021.1996271 .
DOI: 10.6084/m9.figshare.23515581.v1
title: Supporting data demonstrating agile spectral multiplication of a narrowband comb in a multi-wavelength laser

description: Supporting data for our article entitled "Agile THz-range spectral multiplication of frequency combs using a multi-wavelength laser". Each file contain the data corresponding to a figure/panel of the article as indicated in the filename. 
- Fig2: we provide experimental data showing the evolution of the optical spectrum when varying the optical feedback phase. The two laser peaks being separated by 10 nm, the spectra are separated in two parts. 
- Fig3: we provide the data of the optical and RF spectra shown
- Fig4: we provide the evolution of the high-resolution optical spectrum when varying the f_tone frequency. 
- Fig5: we provide the data for each of the 6 sub-panels for the two reported cases (a) and (b).
DOI: 10.6084/m9.figshare.24637866
title: A conformal mapping approach to broadband nonlinear optics on chip

description: The data supports broadband nonlinear frequency conversion on LNOI chip that derived from a conformal mapping approach.
DOI: 10.6084/m9.figshare.23515581
title: Supporting data demonstrating agile spectral multiplication of a narrowband comb in a multi-wavelength laser

description: Supporting data for our article entitled "Agile THz-range spectral multiplication of frequency combs using a multi-wavelength laser". Each file contain the data corresponding to a figure/panel of the article as indicated in the filename. 
- Fig2: we provide experimental data showing the evolution of the optical spectrum when varying the optical feedback phase. The two laser peaks being separated by 10 nm, the spectra are separated in two parts. 
- Fig3: we provide the data of the optical and RF spectra shown
- Fig4: we provide the evolution of the high-resolution optical spectrum when varying the f_tone frequency. 
- Fig5: we provide the data for each of the 6 sub-panels for the two reported cases (a) and (b).
DOI: 10.6084/m9.figshare.24847815
title: Residual ANTXR1+ myofibroblasts after chemotherapy inhibit anti-tumor immunity via YAP1 signaling pathway

description: Data files for the paper entitled : "Residual ANTXR1+ myofibroblasts after chemotherapy inhibit anti-tumor immunity via YAP1 signaling pathway"
by Geraldine Gentric and Fatima Mechta-Grigoriou
DOI: 10.6084/m9.figshare.12644515
title: Additional file 13 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 13: Table S8. List of some important DEPs involved in the enriched pathways in ‘DS45 vs CK45’ comparison group.
DOI: 10.6084/m9.figshare.12644515.v1
title: Additional file 13 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 13: Table S8. List of some important DEPs involved in the enriched pathways in ‘DS45 vs CK45’ comparison group.
DOI: 10.6084/m9.figshare.7518905.v1
title: Inflammatory myofibroblastic tumor of the prostate after transurethral resection of the prostate with negative expression of anaplastic lymphoma kinase: a case report

description: ABSTRACT CONTEXT: Inflammatory myofibroblastic tumors are a rare type of soft-tissue tumor. Inflammatory myofibroblastic tumors are characterized by rearrangements involving the anaplastic lymphoma kinase gene locus on 2p23. Case Report: We report the case of a 67-year-old Chinese male who presented with dysuria and fever. Magnetic resonance imaging showed an irregular prostatic mass with an isointense signal and obscure boundary. Histopathological evaluation showed that the mass consisted mainly of spindle-shaped cells. Immunohistochemical evaluation showed that the tumor cells were negative for anaplastic lymphoma kinase. CONCLUSIONS: Inflammatory myofibroblastic prostate tumors are rare lesions with unclear etiology. The pathological diagnosis is very important.
DOI: 10.6084/m9.figshare.22723027
title: Additional file 1 of Finerenone attenuates myocardial apoptosis, metabolic disturbance and myocardial fibrosis in type 2 diabetes mellitus

description: Additional file 1. Western blot.
DOI: 10.6084/m9.figshare.7518905
title: Inflammatory myofibroblastic tumor of the prostate after transurethral resection of the prostate with negative expression of anaplastic lymphoma kinase: a case report

description: ABSTRACT CONTEXT: Inflammatory myofibroblastic tumors are a rare type of soft-tissue tumor. Inflammatory myofibroblastic tumors are characterized by rearrangements involving the anaplastic lymphoma kinase gene locus on 2p23. Case Report: We report the case of a 67-year-old Chinese male who presented with dysuria and fever. Magnetic resonance imaging showed an irregular prostatic mass with an isointense signal and obscure boundary. Histopathological evaluation showed that the mass consisted mainly of spindle-shaped cells. Immunohistochemical evaluation showed that the tumor cells were negative for anaplastic lymphoma kinase. CONCLUSIONS: Inflammatory myofibroblastic prostate tumors are rare lesions with unclear etiology. The pathological diagnosis is very important.
DOI: 10.6084/m9.figshare.8043491.v4
title: Combining sensor-based measurement and modeling of PM<sub>2.5</sub> and black carbon in assessing exposure to indoor aerosols

description: Accurate, cost-effective methods are needed for rapid assessment of traffic-related air pollution (TRAP). Typically, real-time data of particulate matter (PM) from portable sensors have been adjusted using data from reference methods such as gravimetric measurement to improve accuracy. The objective of this study was to create a correction factor or linear regression model for the real-time measurements of the RTI’s Micro Personal Exposure Monitor (MicroPEM™) and AethLab’s microAeth<sup>®</sup> black carbon (AE51) sensor to generate accurate real-time data for PM<sub>2.5</sub> (PM<sub>2.5RT</sub>) and black carbon (BC<sub>RT</sub>) in Cincinnati metropolitan homes. The two sensors and an SKC PM<sub>2.5</sub> Personal Modular impactor were collocated in 44 indoor sampling events for 2 days in residences near major roadways. The reference filter-based analyses conducted by a laboratory included particle mass (SKC PM<sub>2.5</sub> and MicroPEM™ PM<sub>2.5</sub>) and black carbon (SKC BC); these methods are more accurate than real-time sensors but are also more cumbersome and costly. For PM<sub>2.5</sub>, the average correction factor, a ratio of gravimetric to real time, for the MicroPEM™ PM<sub>2.5</sub> and SKC PM<sub>2.5</sub> utilizing the PM<sub>2.5RT</sub> and was 0.94 and 0.83, respectively, with a coefficient of variation (CV) of 84% and 52%, respectively; the corresponding linear regression model had a CV of 54% and 25%. For BC, the average correction factor utilizing the BC<sub>RT</sub> and SKC BC was 0.74 with a CV of 36% with the associated linear regression model producing a CV of 56%. The results from this study will help ensure that the real-time exposure monitors are capable of detecting an estimated PM<sub>2.5</sub> after an appropriate statistical model is applied. Copyright © 2019 American Association for Aerosol Research
DOI: 10.25387/g3.6995042
title: Supplemental Material for Reid et al., 2018

description: A fluorescent reporter promoter trap element was designed and tested in the mosquito, <i>Anopheles stephensi</i>. This study identified tissue-specific expression patterns and may improve promoter identification in <i>An. stephensi.</i>
DOI: 10.6084/m9.figshare.21857076.v2
title: Perception and attitude towards online clinical modules: A Cross-sectional study among medical students from 2 countries

description: DATA set for creating a repository for the article <strong>Perception and attitude towards online clinical modules: A Cross-sectional study among medical students from 2 countries</strong>
DOI: 10.57745/t9udqr
title: telomeres-G2.tgz

description: Telomeres, G2-phase
DOI: 10.57745/3mx8f4
title: centromeres-eG1.tgz

description: Centromeres, early G1 phase
DOI: 10.34740/kaggle/dsv/6341289
title: Corn Leaf Disease
DOI: 10.5283/epub.55350
title: Data archive of "Sculpting ultrastrong light-matter coupling through spatial matter structuring"
DOI: 10.15151/esrf-es-1435808919
title: Electronic Structures of CO-Releasing Zero-Valent Metal-Organic Frameworks

description: We have developed a novel gas-phase approach to unique, low-valent metal-organic frameworks, exemplified by [Mo(CO)3(bipy)3/2]n (bipy = 4,4′-bipyridine) and [W(CO)3(bipy)3/2]n. The metal nodes are stabilised by carbonyl ligands (CO), which can be liberated upon visible light irradiation. CO ligands can be replaced with paramagnetic NO, and the magnetic moment distribution of these M–NO complexes will provide key insights into the electronic structures of the materials. We aim to use ID12 to directly probe the electronic structure of the metal atoms in the bulk product and as nanocrystalline coatings, using XANES at the Mo and W L2,3 edges, w/o in situ laser photolysis. Furthermore, analysis of the magnetic moment transfer from coordinated NO to the metal sites will be unravelled using XMCD will yield insights into the nature of the bonding that we expect to be fundamentally different to what is currently known for conventional, higher-valent MOFs.
DOI: 10.6084/m9.figshare.6470834.v1
title: Additional file 3: of Necrotizing enterocolitis is associated with acute brain responses in preterm pigs

description: Table S2. Differentially expressed genes (DEGs) between Co-NEC and No-NEC groups. Listed are all the identified DEGs (q value &lt; 0.2), with corresponding location, average FPKM in each group, the (base 2) log of the fold change, the value of the test statistic from Cufflinks, the uncorrected p-value and FDR-adjusted p-value (q value). Table S3. Differentially expressed genes (DEGs) between Si-NEC and No-NEC groups. Listed are all the identified DEGs (q value &lt; 0.2), with corresponding location, average FPKM in each group, the (base 2) log of the fold change, the value of the test statistic from Cufflinks, the uncorrected p-value and FDR-adjusted p-value (q value). Table S4. Differentially expressed genes (DEGs) between Si-NEC and Co-NEC groups. Listed are all the identified DEGs (q value &lt; 0.2), with corresponding location, average FPKM in each group, the (base 2) log of the fold change, the value of the test statistic from Cufflinks, the uncorrected p-value and FDR-adjusted p-value (q value). Table S5. Gene ontology enrichment analysis of DEGs between NEC and No-NEC groups. Listed are enriched gene ontology terms, corrected p-values and involved genes. Table S6. List of gene names, primer sequences and amplicon length of all primers, used in the study. *, reference genes. (XLSX 61 kb)
DOI: 10.6084/m9.figshare.21563541
title: Multi-centric Phase III, single-arm, open-label clinical study to assess clinical safety, tolerability, and efficacy of I.V. Lacosamide for Focal Onset Seizures (FOS)

description: This is a DATA set for the repository link needed for publishing an article on Multi-centric Phase III, single-arm, open-label clinical study to assess clinical safety, tolerability, and efficacy of I.V. Lacosamide for Focal Onset Seizures (FOS)
DOI: 10.6084/m9.figshare.22723070.v1
title: Additional file 1 of Identification of key ferroptosis-related biomarkers in steroid-induced osteonecrosis of the femoral head based on machine learning

description: Additional file 1. Pathway enrichment analysis for AKT1S1, BACH1, MGST1 and SETD1B.
DOI: 10.6084/m9.figshare.22723070
title: Additional file 1 of Identification of key ferroptosis-related biomarkers in steroid-induced osteonecrosis of the femoral head based on machine learning

description: Additional file 1. Pathway enrichment analysis for AKT1S1, BACH1, MGST1 and SETD1B.
DOI: 10.6084/m9.figshare.15041290
title: Additional file 5 of Mobilization of the nonconjugative virulence plasmid from hypervirulent Klebsiella pneumoniae

description: Additional file 5. Table S4. NCBI accession numbers and genetic characteristics of 2608 K. pneumoniae plasmids.
DOI: 10.6084/m9.figshare.15041284.v1
title: Additional file 3 of Mobilization of the nonconjugative virulence plasmid from hypervirulent Klebsiella pneumoniae

description: Additional file 3. Table S2. Oligonucleotides used in this study.
DOI: 10.6084/m9.figshare.20098397
title: Additional file 2 of Cellular and antibody response in GMZ2-vaccinated Gabonese volunteers in a controlled human malaria infection trial

description: Additional file 2: Table S2. Complete list of antigens spotted on the protein microarray.
DOI: 10.14469/hpc/332
title: Table S8: Comparison of two different basis sets for selected intermediates for CHO/PA ROCOP.
DOI: 10.5066/p9rns5fp
title: Continuous water-quality data for selected streams in Rocky Mountain National Park, Colorado, water years 2011-19

description: This data release contains water-quality and discharge data collected in Rocky Mountain National Park (RMNP), Colorado by the U.S. Geological Survey (USGS) from 10/1/2010 through 9/30/2019 using in-situ sensors and field meters. Data were collected for the purpose of quantifying exchange fluxes of dissolved carbon dioxide (CO?) from streams. Parameters include daily mean dissolved CO?, water temperature, atmospheric pressure, and discharge at seven stream sites and one groundwater spring (DailyData.csv). Hourly mean dissolved CO?, CO? partial pressure (pCO2), water temperature, atmospheric pressure, and dissolved oxygen are presented from 10/1/2016 to 9/30/2017 at one of the stream sites (AndrewsHourlyData.csv). Discrete measurements of dissolved CO? are presented for hyporheic samples collected at one site during 2000 (AndrewsHyporheicData.csv) and for a synoptic survey of groundwater springs conducted during summer 2018 (SpringsData.csv).
DOI: 10.6084/m9.figshare.20098400
title: Additional file 3 of Cellular and antibody response in GMZ2-vaccinated Gabonese volunteers in a controlled human malaria infection trial

description: Additional file 3: Table S3. The antibody response against the vaccine antigen (GMZ2) or any of the main components (MSP3, GLURP), estimated before vaccination, was tested for correlation with any of the antibody responses, as estimated by the protein microarray before CHMI. The log-transformed ELISA data and the protein microarray data were tested usind Student's t-test for correlation. Antigens with correlations resulting in p-values &lt; 0.05 are shown.
DOI: 10.5281/zenodo.10312334
title: Measurement report: Secondary organic aerosols at a forested mountain site in southeastern China

description: Supporting dataset for Measurement report: Secondary organic aerosols at a forested mountain site in southeastern China
DOI: 10.5285/065f6040ef08485db989cbd89d536167
title: ESA Fire Climate Change Initiative (Fire_cci): Small Fire Dataset (SFD) Burned Area pixel product for Sub-Saharan Africa, version 1.1

description: The ESA Fire Disturbance Climate Change Initiative (Fire_cci) project has produced maps of global burned area developed from satellite observations. The Small Fire Dataset (SFD) pixel products have been obtained by combining spectral information from Sentinel-2 MSI data and thermal information from MODIS MOD14MD Collection 6 active fire products.

This dataset is part of v1.1 of the Small Fire Dataset (also known as FireCCISFD11), which covers Sub-Saharan Africa for the year 2016.   Data is available here at pixel resolution (0.00017966259 degrees, corresponding to approximately 20m at the Equator).   Gridded data products are also available in a separate dataset.
DOI: 10.5281/zenodo.7860452
title: GloCAB: Global Cropland Area Burned

description: Please note this dataset is undergoing peer review and may be subject to changes. The Global Cropland Area Burned (GloCAB) dataset represents the first attempt at a global cropland-focused burned area product. The dataset provides monthly, cropland burned area files at 0.25-degree spatial resolution from July 2002 - December 2020 for our upper (high) and lower (low) estimates. The data is provided in annual GeoTIFF stacks, where the 2002 tiff file only contains 6 layers (July - December), compared to 12 layers for 2003 - 2020 (January - December). Please refer to the readme file for more details about the dataset.
DOI: 10.5281/zenodo.10367379
title: Optimally interpolated dissolved oxygen based on the World Ocean Database 2018 and CMIP6 models

description: Optimal interpolation of observed and modeled dissolved oxygen data from WOD18 and CMIP6. Technical details are provided in the publication (Ito et al., 2023). 
Ito, T., Garcia, H. E., Wang, Z., Minobe, S., Long, M. C., Cebrian, J., Reagan, J., Boyer, T., Paver, C., Bouchard, C., Takano, Y., Bushinsky, S., Cervania, A., and Deutsch, C. A.: Underestimation of global O2 loss in optimally interpolated historical ocean observations, Biogeosciences Discuss. [preprint], https://doi.org/10.5194/bg-2023-72, in review, 2023.
DOI: 10.17190/amf/1881565
title: AmeriFlux FLUXNET-1F CA-DBB Delta Burns Bog

description: This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site CA-DBB Delta Burns Bog. This is the FLUXNET version of the carbon flux data for the site CA-DBB Delta Burns Bog produced by applying the standard ONEFlux (1F) software. Site Description - Disturbed raised bog ecosystem (peat harvesting 1957 to 1963). Site has been restored and rewetted in 2007 by ditch blocking.