cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5036699
title: Code and data for "Sensitivity of Northern Hemisphere climate to ice-ocean interface heat flux parameterizations"

description: This repository provides the source code and modeled data for three different ice-ocean heat flux<br> parameterizations of a 1-D idealized model, as well as 3-D climate models including CICE,<br> MPIOM and COSMOS, which are used in a GMD manuscript called "Sensitivity of Northern Hemisphere climate to ice-ocean interface heat flux parameterizations". The NCL-based scripts for plotting the figures are also provided. <br> The file all.tar.gz consists of 4 folders as the following: 1. 1-D<br> In the 1-D folder one can find the matlab source code for the 1-D idealized model with main.m being the main script and the others sub-scripts for calculating seasonal changes of different forcings, involving the surface albedo (albedo.m), shortwave fluxes (shortwave.m) and all other kinds of fluxes (otherfluxes.m). 2. code<br> The code folder provides the source code of the three models used in our study: CICE, MPIOM and COSMOS. The most important code in terms of the ice-ocean heat flux in CICE can be found at code/cice/source/ice_therm_vertical.F90. The switch of the options of the three parameterizations can be achieved by changing the parameter "oceanic_heat" (1 for icebath, 2 for 2eq and 3 for 3eq) in the namelist when running the model. The mpiom folder contains the three different set of MPIOM source code for the three ice-ocean heat flux parameterizations respectively. In cosmos, one could find 4 sub-folders, with the folder echam5 containing the source code for the atmosphere module ECHAM5, and the other 3 folders containing the MPIOM source code incorporating with the three different ice-ocean heat flux parameterizations, similar as the mpiom folder. 3. data<br> This folder provides the simulated output from the three models: CICE, MPIOM and COSMOS. Each model folder contains three sub-folders called 2eq, 3eq and icebath, representing the modelled data for the 2eq, 3eq and icebath parameterizations respectively. For CICE, we upload the modeled results of the last 10 years. For MPIOM and COSMOS, as the original data set are too large, here we upload the climatology of the data from the last 100 simulation years. Note that in cosmos, there are some additional variables which are listed seperately, namely the AMOC (amoc.nc), the sea surface pressure (slp.nc) as well as the surface temperature (tsurf.nc). reg.nc contains ocean temperature and salinity which have been interpolated onto a 1x1 regular grid. 4. plot_figures<br> This folder gives the scripts based on NCL to plot the figures in the manuscript, with the *.ncl files being the plotting scripts and the *.eps being the figures. <br> All the code, data, scripts can be used by anyone who has interest.
DOI: 10.14272/xadygzheusbxdw-smdkebrusa-n
title: C120H72Fe3N12+++
title: InChI=1S/C120H72N12.3Fe/c1-9-29-73(30-10-1)109-85-49-53-89(121-85)111(75-33-13-3-14-34-75)93-57-65-101(125-93)117(102-66-58-94(126-102)112(76-35-15-4-16-36-76)90-54-50-86(109)122-90)81-45-25-27-47-83(81)119-105-69-61-97(129-105)115(79-41-21-7-22-42-79)99-63-71-107(131-99)120(108-72-64-100(132-108)116(80-43-23-8-24-44-80)98-62-70-106(119)130-98)84-48-28-26-46-82(84)118-103-67-59-95(127-103)113(77-37-17-5-18-38-77)91-55-51-87(123-91)110(74-31-11-2-12-32-74)88-52-56-92(124-88)114(78-39-19-6-20-40-78)96-60-68-104(118)128-96;;;/h1-72H;;;/q-6;3*+3/b109-85-,109-86-,110-87-,110-88-,111-89-,111-93-,112-90-,112-94-,113-91-,113-95-,114-92-,114-96-,115-97-,115-99-,116-98-,116-100-,117-101-,117-102-,118-103-,118-104-,119-105-,119-106-,120-107-,120-108-;;;

description: This dataset contains experimental data from a sample (InChI=1S/C120H72N12.3Fe/c1-9-29-73(30-10-1)109-85-49-53-89(121-85)111(75-33-13-3-14-34-75)93-57-65-101(125-93)117(102-66-58-94(126-102)112(76-35-15-4-16-36-76)90-54-50-86(109)122-90)81-45-25-27-47-83(81)119-105-69-61-97(129-105)115(79-41-21-7-22-42-79)99-63-71-107(131-99)120(108-72-64-100(132-108)116(80-43-23-8-24-44-80)98-62-70-106(119)130-98)84-48-28-26-46-82(84)118-103-67-59-95(127-103)113(77-37-17-5-18-38-77)91-55-51-87(123-91)110(74-31-11-2-12-32-74)88-52-56-92(124-88)114(78-39-19-6-20-40-78)96-60-68-104(118)128-96;;;/h1-72H;;;/q-6;3*+3/b109-85-,109-86-,110-87-,110-88-,111-89-,111-93-,112-90-,112-94-,113-91-,113-95-,114-92-,114-96-,115-97-,115-99-,116-98-,116-100-,117-101-,117-102-,118-103-,118-104-,119-105-,119-106-,120-107-,120-108-;;;). The datasets from the following experiments are available: infrared absorption spectroscopy (IR) mass spectrometry (MS)
DOI: 10.14272/xadygzheusbxdw-smdkebrusa-n/chmo0000630
title: infrared absorption spectroscopy (IR) ()
title: InChI=1S/C120H72N12.3Fe/c1-9-29-73(30-10-1)109-85-49-53-89(121-85)111(75-33-13-3-14-34-75)93-57-65-101(125-93)117(102-66-58-94(126-102)112(76-35-15-4-16-36-76)90-54-50-86(109)122-90)81-45-25-27-47-83(81)119-105-69-61-97(129-105)115(79-41-21-7-22-42-79)99-63-71-107(131-99)120(108-72-64-100(132-108)116(80-43-23-8-24-44-80)98-62-70-106(119)130-98)84-48-28-26-46-82(84)118-103-67-59-95(127-103)113(77-37-17-5-18-38-77)91-55-51-87(123-91)110(74-31-11-2-12-32-74)88-52-56-92(124-88)114(78-39-19-6-20-40-78)96-60-68-104(118)128-96;;;/h1-72H;;;/q-6;3*+3/b109-85-,109-86-,110-87-,110-88-,111-89-,111-93-,112-90-,112-94-,113-91-,113-95-,114-92-,114-96-,115-97-,115-99-,116-98-,116-100-,117-101-,117-102-,118-103-,118-104-,119-105-,119-106-,120-107-,120-108-;;;

description: dataset for infrared absorption spectroscopy (IR) IR (ATR, ṽ) = 2953 (m), 2919 (vs), 2851 (vs), 1721 (w), 1717 (w), 1669 (w), 1596 (w), 1460 (m), 1441 (m), 1415 (w), 1397 (w), 1377 (w), 1366 (w), 1334 (m), 1261 (m), 1200 (m), 1176 (m), 1157 (w), 1101 (m), 1071 (s), 1035 (m), 1018 (m), 1001 (vs), 994 (vs), 922 (w), 894 (w), 880 (w), 850 (w), 833 (w), 798 (vs), 752 (vs), 718 (vs), 701 (vs), 660 (m), 650 (m), 620 (w), 598 (w), 588 (w), 568 (m), 538 (w), 521 (m), 501 (w), 490 (w), 467 (w), 450 (m), 433 (m), 405 (m), 392 (m), 382 (m) cm–1.
DOI: 10.14272/xadygzheusbxdw-smdkebrusa-n/chmo0000470
title: mass spectrometry (MS) ()
title: InChI=1S/C120H72N12.3Fe/c1-9-29-73(30-10-1)109-85-49-53-89(121-85)111(75-33-13-3-14-34-75)93-57-65-101(125-93)117(102-66-58-94(126-102)112(76-35-15-4-16-36-76)90-54-50-86(109)122-90)81-45-25-27-47-83(81)119-105-69-61-97(129-105)115(79-41-21-7-22-42-79)99-63-71-107(131-99)120(108-72-64-100(132-108)116(80-43-23-8-24-44-80)98-62-70-106(119)130-98)84-48-28-26-46-82(84)118-103-67-59-95(127-103)113(77-37-17-5-18-38-77)91-55-51-87(123-91)110(74-31-11-2-12-32-74)88-52-56-92(124-88)114(78-39-19-6-20-40-78)96-60-68-104(118)128-96;;;/h1-72H;;;/q-6;3*+3/b109-85-,109-86-,110-87-,110-88-,111-89-,111-93-,112-90-,112-94-,113-91-,113-95-,114-92-,114-96-,115-97-,115-99-,116-98-,116-100-,117-101-,117-102-,118-103-,118-104-,119-105-,119-106-,120-107-,120-108-;;;

description: dataset for mass spectrometry (MS) HRMS (C120H72N12Fe3OCl): calc.: 1900.372, found: 1900.375 [M+OCl]
DOI: 10.5281/zenodo.5012942
title: PASTIS - Panoptic Segmentation of Satellite image TIme Series

description: Public dataset for Panoptic segmentation of agricultural parcels from satellite image time series. See companion github repository for more information.
DOI: 10.5281/zenodo.5012941
title: PASTIS - Panoptic Segmentation of Satellite image TIme Series

description: Public dataset for Panoptic segmentation of agricultural parcels from satellite image time series. See companion github repository for more information.
DOI: 10.6084/m9.figshare.14865948
title: Draft genome of chafer beetle Holotrichia diomphalia

description: Beetles in the genus <i>Holotrichia</i>, commonly known as the chafer beetles or white grubs, have their larval stage live under the soil feeding on plant roots. These herbivores have now become one of the major agricultural pests worldwide. Despite their importance, no genomic resources are currently available for the beetle genus <i>Holotrichia</i>. Here, we sequenced and assembled the genome of the chafer beetle <i>Holotrichia diomphalia</i> that<i> </i>is distributed in Asia and feeds on the soybean root. The assembled genome size of <i>H. diomphalia </i>is ~1.4 Gb with high continuity (scaffold N50 = 28 kb) and high BUSCO completeness at 92.3 %. A total of 30,873 protein-coding genes were annotated, and the developmental Hox and ParaHox genes, hormonal sesquiterpenoid pathway genes, and microRNAs were analysed. The chafer beetle <i>H. diomphalia </i>genome presented here provides the first available genomic resource for understanding the biology and evolution of this ecologically important group of insects.<br>
DOI: 10.6084/m9.figshare.14865948.v1
title: Draft genome of chafer beetle Holotrichia diomphalia

description: Beetles in the genus <i>Holotrichia</i>, commonly known as the chafer beetles or white grubs, have their larval stage live under the soil feeding on plant roots. These herbivores have now become one of the major agricultural pests worldwide. Despite their importance, no genomic resources are currently available for the beetle genus <i>Holotrichia</i>. Here, we sequenced and assembled the genome of the chafer beetle <i>Holotrichia diomphalia</i> that<i> </i>is distributed in Asia and feeds on the soybean root. The assembled genome size of <i>H. diomphalia </i>is ~1.4 Gb with high continuity (scaffold N50 = 28 kb) and high BUSCO completeness at 92.3 %. A total of 30,873 protein-coding genes were annotated, and the developmental Hox and ParaHox genes, hormonal sesquiterpenoid pathway genes, and microRNAs were analysed. The chafer beetle <i>H. diomphalia </i>genome presented here provides the first available genomic resource for understanding the biology and evolution of this ecologically important group of insects.<br>
DOI: 10.34740/kaggle/dsv/2377062
title: COVID Vaccination in World (updated daily)
DOI: 10.25934/00003485.0
title: Available IPD datapackage for study 'A Double-blind, Double-dummy, Placebo-controlled, Randomized, Three Parallel Groups Study Comparing the Efficacy, Safety and Tolerability of Pramipexole ER Versus Placebo and Versus Pramipexole IR Administered Orally Over a 26-week Maintenance Phase in Patients With Early Parkinsons Disease (PD).'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00003485.1
title: IPD datapackage for study 'A Double-blind, Double-dummy, Placebo-controlled, Randomized, Three Parallel Groups Study Comparing the Efficacy, Safety and Tolerability of Pramipexole ER Versus Placebo and Versus Pramipexole IR Administered Orally Over a 26-week Maintenance Phase in Patients With Early Parkinsons Disease (PD).' and research request: 'Heterogeneity in relative treatment efficacy by age, sex, socioeconomic status and comorbidity (McAllister)'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.15468/qwrkdv
title: The fossil record of the family Benthopectinidae (Echinodermata, Asteroidea), a reappraisal

description: This dataset contains the digitized treatments in Plazi based on the original journal article Gale, Andy S., Jagt, John W. M. (2021): The fossil record of the family Benthopectinidae (Echinodermata, Asteroidea), a reappraisal. European Journal of Taxonomy 755: 149-190, DOI: https://doi.org/10.5852/ejt.2021.755.1405, URL: http://dx.doi.org/10.5852/ejt.2021.755.1405
DOI: 10.6084/m9.figshare.13105481
title: MEF to induced endoderm progenitors reprogramming

description: scRNA-seq time-series dataset of mouse embryonic fibroblast (MEF) reprogramming to induced endoderm progenitors (iEPs)assayed using Dropseq and 10x Genomics. Contains 8 time points spanning days 0-28 during reprogramming. Total cell number is 104,887.<br>This dataset contains raw spliced and unspliced counts estimated using the velocyto pipeline (La Manno et al., Nature 2018) that can be used to compute RNA velocity. Further, this dataset contains clonal information from CellTagging.<br>Please cite the original publication: https://doi.org/10.1038/s41586-018-0744-4
DOI: 10.6084/m9.figshare.13105481.v2
title: MEF reprogramming

description: scRNA-seq time-series dataset of mouse embryonic fibroblast (MEF) reprogramming to induced endoderm progenitors (iEPs)assayed using Dropseq and 10x Genomics. Contains 8 time points spanning days 0-28 during reprogramming. Total cell number is 104,887.<br>This dataset contains raw spliced and unspliced counts estimated using the velocyto pipeline (La Manno et al., Nature 2018) that can be used to compute RNA velocity. Further, this dataset contains clonal information from CellTagging.<br>Please cite the original publication: https://doi.org/10.1038/s41586-018-0744-4
DOI: 10.5519/qd.eiupj74z
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (11 records)
DOI: 10.5281/zenodo.5036897
title: Data products for "3D modeling of long-term slow slip events along the flat-slab segment in the Guerrero Seismic Gap, Mexico"

description: Data products for '3D modeling of long-term slow slip events along the flat-slab segment in the Guerrero Seismic Gap, Mexico' by A. Perez-Silva, D. Li, A.-A. Gabriel and Y. Kaneko
DOI: 10.5281/zenodo.4561752
title: Data products for "3D modeling of long-term slow slip events along the flat-slab segment in the Guerrero Seismic Gap, Mexico"

description: Data products for '3D modeling of long-term slow slip events along the flat-slab segment in the Guerrero Seismic Gap, Mexico' by A. Perez-Silva, D. Li, A.-A. Gabriel and Y. Kaneko
DOI: 10.25934/00003482.0
title: Available IPD datapackage for study 'A Double-blind, Double-dummy, Placebo-controlled, Randomized, Three Parallel Groups Study Comparing the Efficacy, Safety and Tolerability of Pramipexole Extended Release (ER) Versus Placebo and Versus Pramipexole Immediate Release (IR) Administered Orally Over a 26-week Maintenance Phase in L-Dopa+ Treated Patients With Advanced Parkinsons Disease (PD).'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00003482.1
title: IPD datapackage for study 'A Double-blind, Double-dummy, Placebo-controlled, Randomized, Three Parallel Groups Study Comparing the Efficacy, Safety and Tolerability of Pramipexole Extended Release (ER) Versus Placebo and Versus Pramipexole Immediate Release (IR) Administered Orally Over a 26-week Maintenance Phase in L-Dopa+ Treated Patients With Advanced Parkinsons Disease (PD).' and research request: 'Heterogeneity in relative treatment efficacy by age, sex, socioeconomic status and comorbidity (McAllister)'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.3886/e143122
title: Replication Material for Race, School Discipline, and Magnet Schools

description: This is the replication for "Race, School Discipline, and Magnet Schools." <br>The abstract for the paper is found below: <br>School environment plays an important role in student outcomes. Increasingly, research has also highlighted the role school environment plays in the white-Black suspension gap. We test whether magnet schools reduce the white-Black suspension gap using data from Tulsa Public Schools (TPS). Using student-level and incident-level data from Tulsa, Oklahoma, we explore whether Black students receive exclusionary discipline at lower rates in magnet schools than in traditional schools compared to white students. Using matching techniques to minimize selection bias, we find that magnet schools in Tulsa are associated with a reduction in the racial suspension gap. In magnet schools in Tulsa, we do not find a racial gap in severity of incident or days assigned. <br><br>
DOI: 10.3886/e143122v1
title: Replication Material for Race, School Discipline, and Magnet Schools

description: This is the replication for "Race, School Discipline, and Magnet Schools." <br>The abstract for the paper is found below: <br>School environment plays an important role in student outcomes. Increasingly, research has also highlighted the role school environment plays in the white-Black suspension gap. We test whether magnet schools reduce the white-Black suspension gap using data from Tulsa Public Schools (TPS). Using student-level and incident-level data from Tulsa, Oklahoma, we explore whether Black students receive exclusionary discipline at lower rates in magnet schools than in traditional schools compared to white students. Using matching techniques to minimize selection bias, we find that magnet schools in Tulsa are associated with a reduction in the racial suspension gap. In magnet schools in Tulsa, we do not find a racial gap in severity of incident or days assigned. <br><br>
DOI: 10.5281/zenodo.4561753
title: Data products for slow slip simulation in Guerrero, Mexico

description: Data products for '3D modeling of long-term slow slip events along the flat slab segment in the Guerrero Seismic Gap, Mexico' by A. Perez-Silva, D. Li, A.-A. Gabriel and Y. Kaneko
DOI: 10.6073/pasta/88aff6d0fe62a1d637ce5f433ded8a2f
title: Mark-Recapture of Rodent and Shrew Populations in a Declining Hemlock Stand at Harvard Forest 2012

description: Eastern Hemlocks (Tsuga canadensis) are foundation species, which are known to have a large influence on the species composition and ecosystem dynamics. The purpose of this study was to understand how rodent species richness and composition differed among different hemlock treatments consisting of intact forest, logged forest, and invaded hemlock stands in the Harvard Forest of Petersham, MA. Sherman live traps were arranged on 7x7m grids covering 0.49ha in four different hemlock treatments that were established in 2003: 1) the logged treatment, where commercial trees were removed 2) the girdled treatment, where the hemlocks were girdled using a chainsaw, thus killing the trees, and mimicking the effects of the woolly adelgid, an invasive insect 3) the hemlock control which is where hardwoods are at least 70% hemlocks, and 4) the hardwood control, where other hardwood species are dominate. Animals were marked and recaptured from June-July. Using Schnabel methods for population estimate, there appeared to be a shift in the population from more abundant Gapper’s Red-backed vole, Clethrionomys gapperi in the logged and girdled treatments to white-footed and deer mice (Peromyscus spp) in the hemlock and hardwood control plots. This shift in population may indicate that hemlocks support Peromyscus spp over voles. The species richness and overall population dynamic of these rodents surveyed may lead to a greater understanding as to the potential affect they may have on the seed dispersal in these plots and could account for many interactions between the vegetation and the animals also present.
DOI: 10.6084/m9.figshare.14866077
title: Figures, data and scripts from "A Dynamic State Estimator Based Tolerance Control Method Against Cyberattack and Erroneous Measured Data for Power Systems"

description: The underpinnings of this paper in IEEE Transactions on Industrial Informatics<br>
DOI: 10.6084/m9.figshare.14866077.v1
title: Figures, data and scripts from "A Dynamic State Estimator Based Tolerance Control Method Against Cyberattack and Erroneous Measured Data for Power Systems"

description: The underpinnings of this paper in IEEE Transactions on Industrial Informatics<br>
DOI: 10.6084/m9.figshare.14866107
title: PyLint Reports for students python projects

description: Each of the files contain a report of PyLint's output given when run on some students projects from the third year of university
DOI: 10.25934/00003463.0
title: Available IPD datapackage for study 'A Randomized, Double-blind, Placebo-controlled, Parallel-group Clinical Trial to Examine the Efficacy and Safety of Early Pramipexole (PPX) Treatment Versus Delayed Pramipexole Treatment in Patients With New Onset Parkinson's Disease.'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00003463.1
title: IPD datapackage for study 'A Randomized, Double-blind, Placebo-controlled, Parallel-group Clinical Trial to Examine the Efficacy and Safety of Early Pramipexole (PPX) Treatment Versus Delayed Pramipexole Treatment in Patients With New Onset Parkinson's Disease.' and research request: 'Heterogeneity in relative treatment efficacy by age, sex, socioeconomic status and comorbidity (McAllister)'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00003702.0
title: Available IPD datapackage for study 'A Six Month, Randomized, Double-blind (Within Formulation), Multiple Dose Trial to Compare the Safety and Efficacy of 20 mcg and 40 mcg of Ipratropium Bromide, as Delivered by the RESPIMAT Device, to 18 mcg ATROVENT® Inhalation Aerosol (x 2 Puffs) and Respective Placebos in Adults, With Chronic Obstructive Pulmonary Disease'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.