cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15507330
title: GL‑5.2: Time Delay vs Curvature Gradient — Distance-Only CF Scaling (ψ Fixed)

description: This archive contains the final result of GL‑5.2 under the TASM framework, testing the effect of curvature factor (CF) gradient scaling applied only to the cosmological distances (D_L, D_S, D_LS) while keeping the lens potential ψ(θ) fixed. Time delays were computed for Abell 1689, MACS J1149, and Bullet Cluster across CF gradients [0.0–2.999]. Results show time-delay predictions become increasingly negative with CF. GR (CF=0) is preferred. This confirms falsifiability of the distance-only CF injection model.
DOI: 10.5281/zenodo.15643526
title: GL‑5.2: CF‑Modified Time Delays with Distance Scaling and β Offset (ψ Fixed)

description: This simulation tests the impact of the Curvature Factor (CF) on gravitational lensing time delays when applied to both distance geometry and a synthetic β offset (introducing nonzero Δθ). The Fermat potential remains fixed under an SIS profile (ψ(θ) = θ_E·θ), isolating CF geometry from lensing mass effects.Δt values were computed for three CF gradients (1.0, 2.0, 2.999) across three clusters (Abell 1689, MACS J1149, Bullet Cluster).All outputs were validated using Kolmogorov–Smirnov, Anderson–Darling (Rayleigh), and Chi-Square tests. Each statistical test returned p ≪ 0.05 and strong effect sizes, indicating significant deviation from GR baseline behavior.This run helps delineate which lensing discrepancies can be explained purely by CF geometry and angle offsets — and which require a new Fermat potential.
DOI: 10.22002/405kn-tnm02
title: Oil well Actinobacterium

description: Grid box YWC208
description: <strong>Tilt Series Date:</strong> 2016-04-12</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 2.0°, constant angular increment, dosage: 125.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Fixed cells received from Meng Wang/ Xiao-Lei Wu Lab at Peking University, China</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Firstly wash cells using PBS for 3 times, then add proper volum of 2.5% glutaraldehyde followed 1 hour room temp incubation (done in Peking), then send to Caltech for freezing.</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 4 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
  ycw2016-04-12-39_slicer16850.jpg: Material in the tip of thick tube
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-04-12-39/rawdata/</p>20160412_YWC210_30003.mrc,  Tilt Series (Pixel Size 0.48 nm), 1.5 GB  
        
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        20160412_YWC210_30003_full.rec,  Reconstruction (Pixel Size 1.92 nm), 712.7 MB  
        
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DOI: 10.5281/zenodo.15497454
title: GL‑5 (TASM Protocol): MCMC-Based Curvature Factor Gradient Fit for Strong Lensing Time Delays

description: This dataset contains results from the GL‑5 test in the Tejera-Ace Standard Model (TASM) framework. We evaluate whether injecting a curvature factor (CF) gradient into cosmological distances—without modifying lens mass—improves agreement with observed time delays in Abell 1689, MACS J1149, and Bullet Cluster. MCMC posterior fitting shows the best-fit CF gradient ≈ 0. GR is preferred. This simulation constitutes a falsifiability pass for GL‑5
DOI: 10.5281/zenodo.15587234
title: GL2: Curvature-Modified Einstein Radii — Tejera-Ace Standard Model (TASM)

description: This dataset contains simulation outputs for GL2, the second validation run in the Tejera-Ace Standard Model (TASM) gravitational lensing series. It tests the effect of varying curvature gradients on Einstein radii, using the Curvature Factor (CF) framework. The results are statistically compared to General Relativity (GR) predictions using KS, Anderson-Darling, Chi², and G-tests.
DOI: 10.5281/zenodo.15588354
title: GL3: Curvature-Modified Deflection Angles — Tejera-Ace Standard Model (TASM)

description: This dataset contains protocol-compliant simulation outputs for GL3 (Deflection Angle Comparison) of the Tejera-Ace Standard Model (TASM) gravitational lensing validation suite.It quantifies how the Curvature Factor (CF) framework amplifies deflection angles relative to standard General Relativity (GR) for three well-studied clusters (Abell 1689, MACS J1149, Bullet Cluster).All computations use mass and distance unit corrections, with results output as both GR and CF-modified angles, including percent change.Statistical validation §6 is waived due to small N (deterministic results), per protocol.The impact parameter 𝑅R is treated as a simplified point-mass value, not a full halo profile.

Files Included:

GL3_deflection_CF.csv — Table of deflection angles for all clusters and CF gradients

checksums.txt — SHA-256 hash for artifact verification

GL3_bundle_CF.zip — Archive containing all outputs
DOI: 10.5281/zenodo.15450412
title: GL-4 HSC Y3 Shape Catalog Slice — Tract 10040 (2025 Archive)

description: This file contains the subset of the HSC Y3 GAMA09H shape catalog restricted to the Mizuki “wide” tract 10040, including RA, Dec, ellipticities (e₁,e₂), PSF/shapes weights, and shear-bias calibrations. Intended for CF-corrected shear correlation analysis in GL-4.
DOI: 10.5281/zenodo.15565373
title: Gravitational Lensing Simulation — GL6 (Bullet Cluster) using CF 2.999 Gradient

description: This simulation is the final run of the GL6 gravitational lensing series focused on the Bullet Cluster, applying the Tejera-Ace Standard Model (TASM) with a maximum curvature gradient (CF = 2.999). The model uses a curvature-first lensing framework to replicate observed arc positions without invoking non-baryonic dark matter. All 22 arcs from Bradac et al. (2006) Table 1 were evaluated, with one unstable outlier (Arc I3) excluded based on residual diagnostics.

All results pass statistical validation using Chi-Square, Kolmogorov-Smirnov, and Anderson-Darling tests (FDR-corrected), supporting the TASM hypothesis that curvature can fully account for lensing effects in high-mass collision systems.
DOI: 10.5281/zenodo.15571870
title: GL8 – Abell 520 (P1–P12)

description: This simulation models gravitational lensing in the Abell 520 ("Train Wreck") galaxy cluster using both General Relativity (GR) and the Curvature Factor (CF) framework proposed by the Tejera-Ace Standard Model (TASM). Based on the observed arc peak positions (P1–P12) from Jee et al. (2014), we apply a Singular Isothermal Ellipsoid (SIE) lens with external shear and ray-trace each configuration across four curvature gradients: GR baseline (CF 0.0), CF 1.0, CF 2.0, and CF 2.999.

The goal is to assess whether curvature gradients can replicate observed lensing behavior without invoking excess dark matter. All simulations use a consistent PSO optimization strategy, and residuals are computed as source-plane displacements in arcseconds. Statistical validation includes KS, Chi², Anderson–Darling, and G-tests with FDR correction.

This run complies fully with the TASM Simulation Scrutiny Protocol, including reproducibility, data integrity, and falsifiability. All outputs are archived, hashed, and bundled in a protocol-compliant ZIP for peer audit and publication.
DOI: 10.5281/zenodo.15507382
title: GL‑5.3: CF-Aware Photon Deflection — Weak-Field Geodesic Integration

description: This dataset contains the output from GL‑5.3, the first geodesic-based test under the Tejera-Ace Standard Model (TASM). We derive a CF-modified Schwarzschild metric under the weak-field approximation and numerically integrate photon deflection angles across varying impact parameters. The metric coefficients A(r), B(r) are modified by a curvature factor CF(r) defined as a function of distance and CF gradient. This simulation lays the groundwork for CF-aware lensing predictions beyond traditional GR approximations.
DOI: 10.5281/zenodo.15507781
title: GL‑5.4: Construction of Compression-Informed Lens Potential ψ_CF(θ)

description: This dataset presents the construction of a CF-aware lens potential ψ_CF(θ) by integrating the deflection profile α_CF(θ) derived from a CF-modified geodesic simulation (GL‑5.3). The result is a dimensionless lens potential designed for insertion into time-delay models. This marks the first step in curvature-aware lens modeling within the TASM framework.
DOI: 10.5281/zenodo.15649780
title: GL-5.3: CF-Aware Weak-Field Deflection (Analytic)

description: Tests curvature-scaled Schwarzschild deflection; shows sub-percent boost relative to GR. Serves as analytic sanity anchor before strong-field lens modeling.
DOI: 10.5281/zenodo.15649942
title: GL-5.4: Curvature-Informed Lens Potential ψ_CF(θ)

description: Integrated ψ_CF derived from CF-weighted deflection (CF = 2.0). Provides spline and sample grid for GL-5.5 time-delay tests.
DOI: 10.5281/zenodo.15633281
title: GL‑5.1: CF-Scaled Time Delays with Fixed Lens Potential (Comoving Geometry Test)

description: This dataset accompanies GL‑5.1, a falsifiability test of the Tejera-Ace Standard Model (TASM) curvature framework applied to gravitational lensing time delays. Using corrected comoving distances and normalized CF scaling, this simulation tests whether modifying geometry alone (without adjusting lens potential) can reproduce observed strong-lens time delays. All CF gradients (0.0, 1.0, 2.0, 2.999) are applied to three benchmark clusters: Abell 1689, MACS J1149, and the Bullet Cluster.

Results show systematic inflation of Δt with increasing CF, but statistical validation (KS, A², χ²) confirms the model does not recover the observed distribution. This run is archived as a formal negative falsifiability checkpoint in the TASM framework.

Complies with the TASM Simulation Scrutiny Protocol (Final Release).
DOI: 10.5281/zenodo.15633289
title: GL‑5.0: GR + Λ Deflection Baseline under Weak-Field Approximation

description: This dataset provides the control simulation for GL‑5, measuring gravitational deflection angles under pure GR and GR + Λ (Schwarzschild–de Sitter) metrics. The goal is to establish that Λ (cosmological constant) introduces no observable change in deflection angles at realistic lensing distances (50–500 kpc impact parameters). Both deflection curves (α_GR and α_Λ) were found to be numerically identical, confirming that curvature effects introduced by the Tejera-Ace Curvature Factor (CF) are not mimicking Λ contributions.

This run serves as the validated baseline geometry prior to CF injection and is part of the TASM GL-series under the Simulation Scrutiny Protocol.
DOI: 10.5281/zenodo.14724959
title: Investigating the Interplay of Magnetic, Structural and Optical Properties in MnPS3: Experimental Results and Theoretical Analysis

description: Dataset for "Investigating the Interplay of Magnetic, Structural and Optical Properties in MnPS3: Experimental Results and Theoretical Analysis" 

K. Ignatowicz,a W. M. Linhart,∗a M. Rybak,a N. Antonatos,a B. Wu,b J. Luxa,b J.Serafińczuk,c M. Peter,a Z. Sofer,b and R. Kudrawiec, a

a Department of Semiconductor Materials Engineering, Faculty of Fundamental Problems of Technology, Wrocław University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50-370, Wrocław, Polandb Department of Inorganic Chemistry, University of Chemistry and Technology Prague, Technicka 5, Prague 166 28, Czech Republic c Faculty of Electronics, Photonics and Microsystems, Wrocław University of Science and Technology, Wybrzeże Wyspiańskiego 27, 50-370, Wrocław, Poland

*Corresponding authors: wojciech.linhart@pwr.edu.pl

_____Data manager_____Wojciech Linhartwojciech.linhart@pwr.edu.pl

_____About the dataset_____The dataset contains all relevant data and figures regarding the manuscript "Investigating the Interplay of Magnetic, Structural and Optical Properties in MnPS3: Experimental Results and Theoretical Analysis".

All Figures are in png format and all relevant data are in dat or csv formats. 

The data in csv format are labelled as specified in the corresponding images (e.g. Figure 3a dat file corresponds to data used to plot graphs from Figure 3a etc.). 

Axis labeling and units are always specified at the beginning of individual columns. If more than one curve was plotted from the dat or csv file, the conditions can also be found at the beginning of corresponding columns.

_____Methods of data collection and processing_____Data acquisition and data processing is provided in the manuscript:

_____List of files_____

Folder: Figure 1    Fig 1.png        Created based on crystal structure which is available at https://next-gen.materialsproject.org/materials/mp-8613#how_to_citeFolder: Figure 2    Fig2.png                    Figure 2 - Photoreflectance.dat    Figure 2 - absorption.datFolder: Figure 3    Fig3.png        Figure 3a - Band_structure.dat    Figure 3b - Photoreflectance.dat    Figure 3b - absorption.datFolder: Figure 4    Fig4.png        Figure 4a - Photoreflectance_Tdep.dat    Figure 4b - Absorption_Tdep.dat    Folder: Figure 5    Fig5.png            Created based on fittings data from temperature dependett Absorption and Photoreflectance    Figure 5 - Absorption_Tdep.dat    Figure 5 - Photoreflectance_Tdep.datFolder: Figure 6    Fig6.png         Figure 6a -XRD_300KFolder: Figure 7    Fig7.png        Figure 7a- Band_structue_AFM.dat    Figure 7a - Band_structue_PM    Figure 7c - DOS_PM.dat    Figure 7c -DOS_AFM.datFolder: Figure S1    FigS1.png    Folder: Figure S2    FigS2.png    Figure S2 - survey.csvFolder: Figure S3    FigS3.png    Figure S3 - Mn 2p.csv,     Figure S3 - P 2p.csv,     Figure S3 - S 2p.csvFolder: Figure S4    FigS4.png    Figure S4 - Photoreflectance_TdepFolder: Figure S5    FigS5.png    Figure S5 - XRD_33K.dat    Figure S5 - XRD_298K
DOI: 10.22002/38hbr-q6m26
title: Agro_AD1408_GFP-VirB11

description: AD1408: pAdi16/A348dB11; Kanamycin 50; Functional GFP-VirB11 fusion.
description: <strong>Tilt Series Date:</strong> 2015-07-21</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 121.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain constructed by Anath Das. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grow culture in AB medium (pH 7) at 30C. For induction, use 375 µl of a decent ON culture to inoculate 5 ml AB mes pH 5.8 medium containing 100 µM Acetosyringone and antibiotic (Kan 50). Grow at 20C for 18 hr. Freeze cells.</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 3 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2015-07-21-14/rawdata/</p>1408_atlas_20002.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        1408_atlas_20002.rec,  Reconstruction (Pixel Size 1.92 nm), 889.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2015-07-21-14/3dimage_59369/1408_atlas_20002.rec"
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DOI: 10.5281/zenodo.14675590
title: Theoretical Conformational Analysis of Cross-linking Bonds in Fungal Hydrophobin from Aspergillus fumigatus
DOI: 10.5281/zenodo.15468414
title: MODID-10K
DOI: 10.5281/zenodo.15564501
title: GL6 – Bullet Cluster Lensing Simulation Using TASM Curvature Framework (CF 2.0, Patched v2)

description: This dataset supports the GL6 simulation from the Tejera-Ace Standard Model (TASM) framework, focusing on reproducing strong gravitational lensing in the Bullet Cluster (Bradac+06) using the Curvature Factor (CF) 2.0 gradient. The simulation includes Particle Swarm Optimisation (PSO) for lens parameter fitting under a CF-scaled spacetime model. One significant arc (I3) was excluded due to fit-destabilizing behavior. The validation includes Chi-Square, Kolmogorov–Smirnov, and Anderson-Darling tests (the latter failed, disclosed and retained for reproducibility). This marks a critical milestone in testing whether observed lensing can be explained without invoking dark matter, as TASM reproduces the arc configuration through spacetime curvature alone.
DOI: 10.22002/rf0fd-6ze18
title: V.cholerae

description: This was imaged to study Yi-wei Msh in V.cholerae. This strain expresses Msh pilus but not any other pili.
description: <strong>Tilt Series Date:</strong> 2017-01-06</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Yi-wei</p>
<strong>Purification / Growth Conditions / Treatment:</strong> growth and freezing conditions: pg 95-97 in notebook. next time for vitrobot use: 6, 2.5, 1. 3.5 and 4 ul sample volume</p>
<strong>Sample Preparation:</strong> single tilt. constant angular increment, step: 1.0. tilt range: -60, 60.         dosage: 160e/A2. defocus: -6um. magnification: 27500.</p>
  psa2017-01-06-42_slicer17804.jpg: 2 basal bodies-one with and one w/o flagellum psa2017-01-06-42_slicer17805.jpg: DNA, cell is lysed psa2017-01-06-42_slicer17806.jpg: DNA, cell is lysed psa2017-01-06-42_slicer17807.jpg: DNA, cell is lysed psa2017-01-06-42_slicer17808.jpg: DNA, cell is lysed
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-01-06-42/3dimage_80156/</p>atlas50020_part121_1.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        atlas50020.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-01-06-42/rawdata/atlas50020.mrc"
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DOI: 10.15468/dl.be3y6z
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Allium scorodoprasum",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008576-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13309199
title: Raw data collection for the publication  P. Pötschke, T. Villmow, B. Krause and B. Kretzschmar, Influence of Twin-screw Extrusion Conditions on MWCNT Length and Dispersion and Resulting Electrical and Mechanical Properties of Polycarbonate Composites

description: This data collection contains the raw data for the publication Petra Pötschke, Tobias Villmow, Beate Krause and Bernd Kretzschmar, Influence of Twin-screw Extrusion Conditions on MWCNT Length and Dispersion and Resulting Electrical and Mechanical Properties of Polycarbonate Composites, polymers 2024, 16(19), 2694. https://doi.org/10.3390/polym16192694

The data are sorted according to the figures and tables in which they are used.

The description in Table 1 is taken from the reference:Villmow, T.; Kretzschmar, B.; Pötschke, P. Influence of screw configuration, residence time, and specific mechanical energy in twin-screw extrusion of polycaprolactone/multi-walled carbon nanotube composites. Compos. Sci. Technol. 2010, 70, 2045-2055. doi: https://doi.org/10.1016/j.compscitech.2010.07.021.

Figure 15 is adapted from the references:Krause, B.; Boldt, R.; Pötschke, P. A method for determination of length distributions of multiwalled carbon nanotubes before and after melt processing. Carbon 2011, 49, 1243-1247, https://doi:10.1016/j.carbon.2010.11.042.andLiebscher, M.; Domurath, J.; Krause, B.; Saphiannikova, M.; Heinrich, G.; Pötschke, P. Electrical and melt rheological characterization of PC and co-continuous PC/SAN blends filled with CNTs: Relationship between melt-mixing parameters, filler dispersion, and filler aspect ratio. Journal of Polymer Science Part B: Polymer Physics 2018, 56, 79-88, https://doi:10.1002/polb.24515.The data are reused with permissions. 

The raw data (TEM images) used for the calculation of the carbon nanotube length distributions and mean carbon nanotube length values shown in Figs. 4, 11, 13, 16, and 17 are publically available at: Krause, B. (2024). Transmission electron microscopy (TEM) images of multiwalled carbon nanotubes (MWCNT) detached from polycarbonate (PC) composites [Data set]. Zenodo. https://doi.org/10.5281/zenodo.11400466
DOI: 10.5281/zenodo.15579868
title: TASM GL-1: Einstein Radii Under GR (Baseline Run)

description: This simulation computes the Einstein radii for three strong-lensing clusters using the standard GR formula under point-mass assumptions. It establishes a canonical baseline for θ_E under curvature = 0.0 in the Tejera-Ace Standard Model.The run is exempt from §6 statistical validation due to its deterministic, non-distributional nature (N = 3).
DOI: 10.15468/dl.n8ns6z
title: Occurrence Download

description: A dataset containing 19384 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Coriaria myrtifolia"
 ]
}

 The dataset includes 19384 records from 251 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008573-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.