cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14269698.v1
title: Psychological Capital Questionnaire (PCQ-24): Preliminary Evidence of Psychometric Validity of the Brazilian Version

description: Abstract The PCQ-24 is the main international measure for assessing psychological capital (PsyCap) in organizational contexts. In order to evaluate its adaptation to the Brazilian context, this study aimed to verify preliminary evidences of its psychometric validity. Data collection was conducted online with 749 employees from all regions of Brazil. Confirmatory factor analysis was performed to examine the quality of fit of the second-order factor structure of PCQ-24. The fit indicators were satisfactory (χ2= 742.10, χ2/df= 4.01, p&lt; .001, SRMR= .05, CFI= .91, GFI= .90, TLI= .90, RMSEA= .06). Cronbach’s alpha was .92 and the composite reliability coefficient was .95; in addition, a multigroup confirmatory factorial analysis, comparing male and female participants, demonstrated that the scale is adequate for both groups. These results indicate, in a preliminary way, the validity of PCQ-24 as a measure of psychological capital in the Brazilian labor context.
DOI: 10.6084/m9.figshare.27369336.v1
title: 一种基于弱边缘估计的 OCT 分割多任务神经网络

description: 光学相干断层扫描 （OCT） 提供眼底的高分辨率图像。 这使得医生能够对视网膜健康状况进行全面分析，为诊断和治疗提供坚实的基础。 随着深度学习的发展，基于深度学习的方法在眼底 OCT 图像分割中越来越受欢迎。 然而，这些方法仍然面临两个主要挑战。 首先，深度学习方法对弱边缘很敏感。 其次，注释医学图像数据的高成本导致缺乏标记数据，导致模型训练期间出现过度拟合。 为了应对这些挑战，我们引入了带修剪的多任务注意力机制网络 （MTAMNP），它由分割分支和边界回归分支组成。 边界回归分支利用从截断有序距离函数 （TSDF） 派生的自适应加权损失函数，提高了模型保留弱边缘细节的能力。 基于空间注意力的双分支信息融合模块链接了这些分支，实现了互惠互利。此外，我们提出了一种基于通道关注的结构化修剪方法，以减少参数数量、减轻过拟合并保持分割精度。 我们的方法在两个广泛访问的数据集上超越了其他尖端的分割网络，在 HCMS 和 Duke 数据集上实现了 84.09% 和 93.84% 的 Dice 分数。
DOI: 10.6084/m9.figshare.5197879.v2
title: PLOS ONE-CAD-VR Data

description: For CAD-VR Data Translation available for PLOS ONE Journal.
DOI: 10.17632/cd8n3kzggp
title: Daily food commodity price (082017 - 082024)

description: Daily food commodity price and python code
DOI: 10.6084/m9.figshare.14761977.v1
title: Final SPSS .sav

description: cohort study for quality of life research study involving diabetic type 2 children
DOI: 10.6084/m9.figshare.25334386.v1
title: Pérez-Escoda, A. (2024). Data set Study three countries: Spain, Colombia, Costa Rica

description: Data set Study from three countries: Spain, Colombia, Costa RicaAuthor: Ana Pérez-Escoda
DOI: 10.6084/m9.figshare.4990394.v1
title: Yarrowia lipolytica DGA1 RNAseq, metabolomics, proteomics and genome-scale models

description: Additional information to the mBio paper "Leucine biosynthesis is involved in regulating high lipid accumulation in <i>Yarrowia lipolytica" </i>(https://doi.org/10.1128/mBio.00857-17)<i>.</i><i><br></i>* models.zip contains condition-specific genome-scale models of <i>Yarrowia lipolytica </i>metabolism* proteomics_log2_counts.xlsx contains the log2 transformed proteomics counts* proteomics_crossCompare.xlsx contains results from cross-comparison differential expression analysis of proteomics data<br>* proteomics_lineaModel.xlsx contains results from general linear model differential expression analysis of proteomics data<br>* RNAseq_log2_counts.xlsx contains the log2 transformed RNAseq counts* RNAseq_crossCompare.xlsx contains results from cross-comparison differential expression analysis of RNAseq data<br>* RNAseq_crossCompare.xlsx contains results from general linear model differential expression analysis of RNAseq data<br><br>For more details regarding the experimental setup and data-generation, please see the paper.
DOI: 10.6084/m9.figshare.936910.v7
title: Source code for "Entangled-state generation and Bell inequality violations in nanomechanical resonators"

description: This fileset contains the source code for the numerical simulations in "Entangled-state generation and Bell inequality violations in nanomechanical resonators" (arXiv:1402.4900). The simulations are programmed in Python, using the IPython Notebook format, and using the QuTiP package for quantum dynamics simulations. For more information on how to run these IPython Notebooks, see http://www.ipython.org. The notebooks can also be viewed as static HTML files using the links below.
DOI: 10.17632/r95j35g6jc
title: Structural basis for the modulation of human KCNQ4 by small-molecule drugs. Li et al

description: Unprocessed gels
DOI: 10.6084/m9.figshare.1185496.v1
title: Grassland Dataset 1 - Lab 01 - Group 1

description: Akhilesh Kadian; Techniques & Data.
DOI: 10.6084/m9.figshare.14411102.v1
title: 立山における酸性雨観測結果（2020）

description: 立山有料道路沿いにおける酸性雨観測を2003年から継続しており、標高別に降水中のイオン濃度、pH、電気伝導度、粒子個数濃度（粒子個数濃度の測定は2012年より開始）の挙動をモニタリングしてきた。本報告では、2020年の観測結果について報告する。<br>2020年は、硫酸イオンに特徴的な傾向がみられた。8月は全ての観測地点において、硫酸イオン濃度が他の月よりも高くなった。同時期に小笠原諸島にある西之島で噴火が発生しており、その影響が立山でも確認されたことを示唆した。
DOI: 10.6084/m9.figshare.21078067.v2
title: Transcriptomics of circulating neutrophils in dairy cows with subclinical hypocalcemia

description: Transcriptome RNA-seq sequencing row data
DOI: 10.17632/mvdw7xd9rb
title: Does Specialized Psychological Treatment for Offending Reduce Recidivism? A Meta-Analysis Examining Staff and Program Variables as Predictors of Treatment Effectiveness

description: All research hypotheses and method underpinning the data may be found in our preregistration document available via the Open Science Framework (see https://osf.io/euv7t/). Notable findings are outlined in the publication itself: Gannon, T. A., Olver, M. E., Mallion, J. S., & James, M. (2019). Does specialized psychological treatment for offending reduce recidivism? A meta-analysis examining staff and program variables as predictors of treatment effectiveness. Clinical Psychology Review.
DOI: 10.6084/m9.figshare.16611526.v1
title: Forest plants and spiders assemblages and traits datasets

description: Six matrices available :1) Site description and habitat conditions, a list of plots studied with sites, forest continuity (recent or ancient site) and geographical coordinates.<br>2) Plant assemblages data, with the percent cover of each species within all plots used in this study.3) Spider assemblages data (presence-absence) <br>4) Plant trait data, the raw trait data for all species recorded into the studied plots (9 traits).5) Spider trait data (4 traits).
DOI: 10.17632/jf27d9wy3z
title: Systematic Bias in Reanalysis-Derived Solar Power Profiles & the Potential for Error Propagation in Long Duration Energy Storage Studies Data Repository

description: This dataset contains the relevant data for a paper submitted for review. DOI will be linked here upon publishing.
The PV Simulation Data folder contains simulated outputs for solar farms in Northern Ireland & Australia and the static site data describing key parameters or assumed parameters for the given sites.
LDES Model folder contains a PLEXOS model + the necessary inputs to run it.
DOI: 10.17632/njg9yctdgf
title: SAMBA: A Graph-Mamba Approach for Stock Price Prediction

description: This repository hosts the code for the SAMBA model, proposed in our IEEE ICASSP 2025 paper "Mamba Meets Financial Markets: A Graph-Mamba Approach for Stock Price Prediction".
More information about data is available at "CNNpred: CNN-based stock market prediction using a diverse set of variables" published in Expert Systems with Applications. 
Link to Github of the project: https://github.com/Ali-Meh619/SAMBA
DOI: 10.6084/m9.figshare.12859529.v1
title: Knowledge, attitude and practice towards stroke and thrombolysis among students preparing for undergraduate medical entrance examination in Kathmandu, Nepal

description: Questions
DOI: 10.6084/m9.figshare.7010528.v1
title: Wu et al., 2018

description: The weather, CTD and ADCP data used in Wu et al., 2018
DOI: 10.17632/h2hc4kxc6f
title: MATLAB Code for "Effect of Age and Embryo Morphology on Live Birth Rate After Transfer of Unbiopsied Blastocysts".

description: This data set consists of 5 MATLAB programs used to generate data for figures and tables in this study. All of the pertinent data analysis can be performed by running the file “generate_data.m” with MATLAB. Descriptions for each of the 5 included MATLAB programs are included in the comments section at the beginning of each program.
DOI: 10.6084/m9.figshare.23612892.v3
title: Suppl Table 1_corr.xlsx

description: Characteristics of the study population of vegans and omnivores.
DOI: 10.6084/m9.figshare.25487999.v1
title: A conversational agent framework for mental health screening: design, implementation, and usability

description: While chatbots show promise for large-scale mental health screening, few offer interactive, free-text conversations, limiting their appeal for self-administered screening and impeding the timely detection of mental health issues. This study introduces an AI-based chatbot that allows users to respond to validated screening surveys for mental disorders (PHQ-9, GAD-7, and PCL-5) in a natural, free-text conversation manner with real-time feedback. The study's objectives include evaluating the chatbot's usability and reducing the frequency of response clarifications while accurately interpreting users’ responses. The system was assessed running in hybrid NLU mode (Phase 2; <i>N</i> = 587; Mage = 21.56, SD = 5.56, 67.8% women) after being trained on data collected while running in rule-based mode (Phase 1; <i>N</i> = 274; Mage = 21.86, SD = 5.50). During user-chatbot interactions, the chatbot required clarification only 4.64% of the time. Using the AI NLU model, the chatbot could understand user responses in 85.65% of cases and interpret free-text similarly to human annotators. In terms of usability, the chatbot in hybrid NLU mode was perceived as more engaging, friendly, and easier to use than in the rule-based NLU mode, which may be indirectly attributed to the enhanced autonomy provided by the AI NLU model.
DOI: 10.6084/m9.figshare.25827688.v2
title: 16S ribosomal RNA sequences from tumor and adjacent normal tissues of patients with OSCC

description: The sequence file contains 16S ribosomal RNA sequences from tumor and adjacent normal tissues of patients with OSCC. They are broken up into 2 groups, and those groups are divulged within the metadata file. Coordinates in metadata file are grid coordinates from the tissues used for spatial analysis, (1 unit in metadata file = c. 50 cm). Tissue dimensions were 10 mm x 10 mm.
DOI: 10.6084/m9.figshare.28877003.v1
title: YOLO and IMU data.

description: Data collected by onboard YOLO and IMU.
DOI: 10.6084/m9.figshare.24832857.v1
title: A whole-body dynamic mean thermal sensation model: Dataset

description: Dataset used to derive and validate the whole-body Dynamic Mean thermal sensation Vote (DMV) model.
DOI: 10.6084/m9.figshare.25746012.v1
title: Absorption and diffusion process at the CO<sub>2</sub>-decane interface considering density fluctuations near the critical CO<sub>2</sub> point

description: Based on a new conceptual model, which considers CO<sub>2</sub> density fluctuations in the critical range, we were able to consistently explain the time dependence of the volume increase for the respective thermodynamic state. The experimental results confirm the new conceptual model that volume swelling in the non-critical pressure range (&lt; 6 MPa) is a <i>surface effect with limited penetration depth</i>.
DOI: 10.6084/m9.figshare.7817564.v1
title: README

description: This is a README file explaining the data in more detail.<br>The CC-BY-4.0 license included here accompanies the processed recount2 released with this data.
DOI: 10.17632/3w327r5br8
title: BIG-600K (Part 3)

description: Paper: BRIDGE: A Multi-organ Foundation Model for Bridging Histology Images to Spatial Transcriptomics
Authors: Zhuo Liang , Weiqin Zhao , Fuying Wang , Guangyong Chen , Yuanhua Huang , Lequan Yu
DOI: 10.17632/6hfdyz929x
title: VLF-EM and electrical resistivity raw data

description: These data represent all the measurements of Electrical Resistivity and very low frequency electromagnetic (VLF-EM) conducted in the field
DOI: 10.17632/nzdffnx8f7
title: Capacity data of lithium-ion batteries

description: q1.mat: normalized and smoothed capacity data of normal lithium-ion batteries.
q2.mat: normalized and smoothed capacity data of abnormal lithium-ion batteries.
DOI: 10.6084/m9.figshare.1558379.v1
title: Data collection of black cherry plant in grassland using line transect method

description: The experiemnt was on data collection of black cherry plant in the grassland using Line transect method.It was conductedt at the York university grassland and woodlot and stated at about 3pm on the 22nd of September ,2015. The location of the research site is close to some residential houses . A group of four students, Stanley, sheran , Bryson and Nadura were divided into 2 groups,Stanley and Sheran did experiemnt 2 and 3 using transect measuring tapes while Nadura and Bryson did experiment 1 and 4 using quadrat and transect. the experiment. Experiment 2 was conducted by stanley withe the help of Sheran while experiement 3 was done in the woodlot and was conducted by Sheran assisted by Stanley. Experiment 2 was carried out on the garssland at a temperature of about 22 degree celsius and a particular plant black cherry was the sample . A tansect was placed randomly in one spot in the grassland and a transect measuring tape was place on the a stragit line and the distance between the initail spot and the first visible Black cherry plant in that line was recorded. Theheight, number of leaves ,number of flowers and the crowdedness were recorded. Then the data of the next plant in the line was also recorded. it continued untill the tape got finished at the 33rd sample.A random smaple generator was use to determine where to continue from by taking a random number from one to twenty . It happened that 8 was the number and so eight steps were counted to the left and the the experiment was started over from there. the transect measuring tape was again placed in a a straight line from that spot and the whole process of measuring the distance from the spot, height, crowdedness continued. The entire process was done for 50 samples and the data recorded.
DOI: 10.6084/m9.figshare.16657003.v1
title: Pupuke composite palaeomagnetic record.txt

description: Composite Holocene geomagnetic palaeosecular variation record from sediments of Lake Pupuke, New Zealand. Supplementary datafile.
DOI: 10.17632/5j93jhjh6n
title: Proteome Dataset of Chili Pepper Plant (Capsicum frutescens) Infested by Broad Mite (Polyphagotarsonemus latus) - Supplementary files

description: Supplementary files of TMT labelled proteomic study of Capsicum frutescens infested by a Polyphagotarsonemus latus. Data was captured using a nano liquid chromatography system coupled with a high-resolution Orbitrap FusionTribridmass spectrometer. Proteomics data was analyzed using the Proteome Discoverer version 2.4 tool using MASCOT and SequestHT algorithms. List of identified proteins (Supplementary Table 1), identified proteins belonging to different protein classes (Supplementary Table 2), Output dataset of reciprocal BLAST (Supplementary Table 3), Output dataset obtained from SUBA4 tool (Supplementary Table 4), Output dataset obtained from STRING analysis (Supplementary Table 5), Interactive file of STRING analysis (Supplementary file 6) and List of identified capsicum proteins mapped to different KEGG Orthology (Supplementary Table 7) are attached here.
DOI: 10.17632/x844x4ky8x
title: Aerobic glycolysis is the predominant means of glucose metabolism in neuronal somata, which protects against oxidative damage

description: Different distribution of PKM2 drives neurons to use aerobic glycolysis in somata to prevent oxidative damage and OXPHOS in terminals to meet high energy demands.
DOI: 10.17632/2z2s9n97jt
title: SusyMath: A Mathematica package for quantum superfield calculations

description: Abstract SusyMath is a Mathematica package for quantum superfield calculations. It defines a standard form to translate the correction to the effective action corresponding to a given supergraph into a Mathematica expression, which is then evaluated and simplified. Several functions for manipulations of these expressions are provided, and the package also has the ability to save the outcomes of its calculations in form. Title of program: SusyMath Catalogue Id: ADYQ_v1_0 Nature of problem Evaluate quantum corrections to the effective action of supersymmetric field theories, formulated in the superfield formalism, both in three- and four-spacetime dimensions. Versions of this program held in the CPC repository in Mendeley Data ADYQ_v1_0; SusyMath; 10.1016/j.cpc.2006.11.004 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/5r85hp8gt3
title: Kawano et al., Cell Reports

description: Raw data for Kawano et al., "ER proteostasis regulators cell-non-autonomously control sleep" (Cell Reports; 2023)
DOI: 10.6084/m9.figshare.25057768.v1
title: Supplementary table 2 from Extreme lower jaw elongation in a placoderm reflects high disparity and modularity in early vertebrate evolution

description: Character matrix
DOI: 10.17632/mdh5p6x2gp
title: Sustainability assessment tools for retail buildings: a comparative analysis of trends and opportunities

description: This dataset consist of the user manuals from the non-domestic buildings’ versions of LEED, BREEAM and DGBN for new buildings and corresponded to the latest version of the method applicable to new retail buildings, namely: “LEED v4.1 BUILDING DESIGN AND CONSTRUCTION, dated April 2021”, “Technical Manual SD5078 BREEAM UK New Construction 2018 3.0 for Non-domestic Buildings”, and “DGNB New Buildings Criteria Set Version 2020 International”.
DOI: 10.6084/m9.figshare.15179775.v1
title: Dataset for Gut microbiota drives age-related oxidative stress and mitochondrial damage in microglia via the metabolite N(6)-Carboxymethyllysine

description: Microglial function declines during aging. The interaction of microglia with the gut microbiota has been well characterized during development and adulthood, but not in aging. Here, we compared microglial transcriptomes from young, adult, and aged mice housed under germ-free and specific-pathogen-free conditions and found that the microbiota influenced aging associated-changes in microglial gene expression. The absence of gut microbiota diminished oxidative stress and ameliorated mitochondrial dysfunction in microglia from aged brains. Unbiased metabolomic analyses of serum and brain tissue revealed the accumulation of N(6)-carboxymethyllysine (CML) in microglia of the aging brain. CML mediated a burst of reactive oxygen species (ROS) and impeded mitochondrial activity and ATP reservoirs in microglia. We validated the age-dependent rise in CML levels in sera and brains of human subjects. Finally, a microbiota-dependent increase in intestinal permeability in aged mice mediated the elevated levels of CML. This study adds insight into how specific features of microglia from aged mice are regulated by gut microbiota.
DOI: 10.6084/m9.figshare.27173274.v1
title: Raman spectra and confocal raw .czi files associated with Figures 3,4,5,6 (confocal) and figures 1,7 (raman).

description: Microbes inhabiting complex porous microenvironments in sediments and aquifers catalyze reactions that are critical to global biogeochemical cycles and ecosystem health. However, the opacity and complexity of porous sediment and rock matrices have considerably hindered the study of microbial processes occurring within these habitats. Here we generated biocompatible, optically transparent mineral scaffolds to visualize and investigate microbial colonization and activities occurring in these environments, in laboratory settings and <i>in situ</i>. Using inexpensive synthetic cryolite mineral, we produced optically transparent scaffolds mimicking the complex three-dimensional structure of sediments and rocks, by adapting a suspension-based freeze casting technique commonly used in materials science. Fine-tuning of parameters such as freezing rate and choice of solvent provided full control of pore size and architecture. The combined effects of scaffold porosity and structure on the movement of microbe-sized particles, tested using velocity-tracking of fluorescent beads, showed diverse yet reproducible behaviors. The scaffolds we produced are compatible with fluorescence imaging down to 100 µm depth, as well as Raman spectroscopy, allowing the identification of colonizing microbes, combined with the quantification of microbial activity at the single-cell level, using D<sub>2</sub>O- or <sup>13</sup>C-labeling. To demonstrate the relevance of cryolite scaffolds for environmental field studies, we visualized their colonization by diverse microorganisms within rhizosphere sediments of a coastal seagrass, using fluorescence microscopy. The new tool presented here enables highly resolved, spatially explicit, and multi-modal investigations into the distribution, activities, and interactions of underground microbes typically obscured within opaque geological materials until now.
DOI: 10.6084/m9.figshare.5539873
title: Computed tomography in hypersensitivity pneumonitis: main findings, differential diagnosis and pitfalls

description: <b>Introduction</b>: Hypersensitivity pneumonitis (HP) is a disease with variable clinical presentation in which inflammation in the lung parenchyma is caused by the inhalation of specific organic antigens or low molecular weight substances in genetically susceptible individuals. Alterations of the acute, subacute and chronic forms may eventually overlap, and the diagnosis based on temporality and presence of fibrosis (acute/inflammatory HP <i>vs</i>. chronic HP) seems to be more feasible and useful in clinical practice. Differential diagnosis of chronic HP with other interstitial fibrotic diseases is challenging due to the overlap of the clinical history, and the functional and imaging findings of these pathologies in the terminal stages. <b>Areas covered</b>: This article reviews the essential features of HP with emphasis on imaging features. Moreover, the main methodological limitations of high-resolution computed tomography (HRCT) interpretation are discussed, as well as new perspectives with volumetric quantitative CT analysis as a useful tool for retrieving detailed and accurate information from the lung parenchyma. <b>Expert commentary</b>: Mosaic attenuation is a prominent feature of this disease, but air trapping in chronic HP seems overestimated. Quantitative analysis has the potential to estimate the involvement of the pulmonary parenchyma more accurately and could correlate better with pulmonary function results.
DOI: 10.17632/33pkw5g59d
title: Data for: Adaptive learning path recommender approach using auxiliary learning objects

description: data for the evaluation part of our paper
DOI: 10.17632/brst8d3c7k
title: (Re)positioning, (re)ordering, (re)connecting: A choreographic process of mind and body convergence

description: Two dancers, one from Lebanon and one from U.S., initiated new ways to choreograph birthed out of who they are, their geographical separation and their sociopolitical environments. They came together, virtually and in real life, to create hybrid performances investigating what it means to be a female in the twenty-first century through the lens of their respective countries and utilizing a feminist social constructionist perspective.