cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21582220.v1
title: Additional file 1 of Bacterial colonization of the upper airways of children positive and negative for SARS-CoV-2 during the COVID-19 pandemic

description: Additional file 1. PCR Results.
DOI: 10.6084/m9.figshare.21582224
title: Additional file 2 of Modeling and cleaning RNA-seq data significantly improve detection of differentially expressed genes

description: Additional file 2. R program and examples. The program code of RNAdeNoise in R language, examples of the use.
DOI: 10.6084/m9.figshare.21582224.v1
title: Additional file 2 of Modeling and cleaning RNA-seq data significantly improve detection of differentially expressed genes

description: Additional file 2. R program and examples. The program code of RNAdeNoise in R language, examples of the use.
DOI: 10.6084/m9.figshare.21582239
title: Additional file 1 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 1. Table S1.
DOI: 10.6084/m9.figshare.21582239.v1
title: Additional file 1 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 1. Table S1.
DOI: 10.6084/m9.figshare.21582242
title: Additional file 2 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 2. Table S2
DOI: 10.6084/m9.figshare.21582242.v1
title: Additional file 2 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 2. Table S2
DOI: 10.6084/m9.figshare.21582248
title: Additional file 4 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 4. Table S3
DOI: 10.6084/m9.figshare.21582248.v1
title: Additional file 4 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 4. Table S3
DOI: 10.6084/m9.figshare.21582251
title: Additional file 5 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 5. Dataset Fasta 1.
DOI: 10.6084/m9.figshare.21582251.v1
title: Additional file 5 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 5. Dataset Fasta 1.
DOI: 10.6084/m9.figshare.21582254
title: Additional file 6 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 6. Dataset Fasta 2.
DOI: 10.6084/m9.figshare.21582254.v1
title: Additional file 6 of Virome and nrEVEome diversity of Aedes albopictus mosquitoes from La Reunion Island and China

description: Additional file 6. Dataset Fasta 2.
DOI: 10.6084/m9.figshare.21582266
title: Additional file 2 of Modulation of the porcine intestinal microbiota in the course of Ascaris suum infection

description: Additional file 2. Hub nodes identified in faecal microbial association networks from Ascaris suum single-infected and trickle-infected pigs and a non-infected control group based on eigenvector centrality. Hubs shared between experimental groups on the same day are highlighted in yellow, while hubs occurring in subsequent networks of the same group are highlighted in green.
DOI: 10.6084/m9.figshare.21582266.v1
title: Additional file 2 of Modulation of the porcine intestinal microbiota in the course of Ascaris suum infection

description: Additional file 2. Hub nodes identified in faecal microbial association networks from Ascaris suum single-infected and trickle-infected pigs and a non-infected control group based on eigenvector centrality. Hubs shared between experimental groups on the same day are highlighted in yellow, while hubs occurring in subsequent networks of the same group are highlighted in green.
DOI: 10.6084/m9.figshare.21582278
title: Additional file 1 of The effect of EMPAgliflozin on markers of inflammation in patients with concomitant type 2 diabetes mellitus and Coronary ARtery Disease: the EMPA-CARD randomized controlled trial

description: Additional file 1: The Flow Cytometric assay results of per-patient levels of ROS at baseline (B) and week 26 (A).
DOI: 10.6084/m9.figshare.21582278.v1
title: Additional file 1 of The effect of EMPAgliflozin on markers of inflammation in patients with concomitant type 2 diabetes mellitus and Coronary ARtery Disease: the EMPA-CARD randomized controlled trial

description: Additional file 1: The Flow Cytometric assay results of per-patient levels of ROS at baseline (B) and week 26 (A).
DOI: 10.6084/m9.figshare.21582281.v1
title: Additional file 2 of The effect of EMPAgliflozin on markers of inflammation in patients with concomitant type 2 diabetes mellitus and Coronary ARtery Disease: the EMPA-CARD randomized controlled trial

description: Additional file 2: The Flow Cytometric assay results of per-patient levels of platelet CD62P Ag expression at baseline (B) and week 26 (A).
DOI: 10.6084/m9.figshare.21582281
title: Additional file 2 of The effect of EMPAgliflozin on markers of inflammation in patients with concomitant type 2 diabetes mellitus and Coronary ARtery Disease: the EMPA-CARD randomized controlled trial

description: Additional file 2: The Flow Cytometric assay results of per-patient levels of platelet CD62P Ag expression at baseline (B) and week 26 (A).
DOI: 10.6084/m9.figshare.21582311
title: Additional file 1 of Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties

description: Additional file 1.
DOI: 10.6084/m9.figshare.21582311.v1
title: Additional file 1 of Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties

description: Additional file 1.
DOI: 10.6084/m9.figshare.21582314
title: Additional file 2 of Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties

description: Additional file 2.
DOI: 10.6084/m9.figshare.21582314.v1
title: Additional file 2 of Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties

description: Additional file 2.
DOI: 10.6084/m9.figshare.21582317
title: Additional file 3 of Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties

description: Additional file 3.
DOI: 10.6084/m9.figshare.21582317.v1
title: Additional file 3 of Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties

description: Additional file 3.
DOI: 10.6084/m9.figshare.21582320
title: Additional file 4 of Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties

description: Additional file 4.
DOI: 10.6084/m9.figshare.21582320.v1
title: Additional file 4 of Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties

description: Additional file 4.
DOI: 10.6084/m9.figshare.21582338
title: Additional file 5 of Prevalence of hypertension and associated risks in hospitalized patients with COVID-19: a meta-analysis of meta-analyses with 1468 studies and 1,281,510 patients

description: Additional file 5. Overlap calculation.
DOI: 10.6084/m9.figshare.21582338.v1
title: Additional file 5 of Prevalence of hypertension and associated risks in hospitalized patients with COVID-19: a meta-analysis of meta-analyses with 1468 studies and 1,281,510 patients

description: Additional file 5. Overlap calculation.
DOI: 10.6084/m9.figshare.21582352
title: Additional file 3 of Impact of parasite genomic dynamics on the sensitivity of Plasmodium falciparum isolates to piperaquine and other antimalarial drugs

description: Additional file 3:. Growth inhibition and genomic end point study data.
DOI: 10.6084/m9.figshare.21582352.v1
title: Additional file 3 of Impact of parasite genomic dynamics on the sensitivity of Plasmodium falciparum isolates to piperaquine and other antimalarial drugs

description: Additional file 3:. Growth inhibition and genomic end point study data.
DOI: 10.6084/m9.figshare.21582413
title: Additional file 1 of Systematic investigation of imprinted gene expression and enrichment in the mouse brain explored at single-cell resolution

description: Additional file 1.
DOI: 10.6084/m9.figshare.21582413.v1
title: Additional file 1 of Systematic investigation of imprinted gene expression and enrichment in the mouse brain explored at single-cell resolution

description: Additional file 1.
DOI: 10.6084/m9.figshare.21582415
title: Additional file 1 of Evaluation of word embedding models to extract and predict surgical data in breast cancer

description: Additional file 1. Results (word pairs) of hyper-parameters combinations.
DOI: 10.6084/m9.figshare.21582415.v1
title: Additional file 1 of Evaluation of word embedding models to extract and predict surgical data in breast cancer

description: Additional file 1. Results (word pairs) of hyper-parameters combinations.
DOI: 10.6084/m9.figshare.21582455
title: Additional file 3 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 3 Supplementary Table S1. Origin of melanoma cell lines, histopathological features of the corresponding primary tumor, cell line authentication data by STR profiling, and mutational profile by NGS of 14 melanoma cell lines used in this study.
DOI: 10.6084/m9.figshare.21582455.v1
title: Additional file 3 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 3 Supplementary Table S1. Origin of melanoma cell lines, histopathological features of the corresponding primary tumor, cell line authentication data by STR profiling, and mutational profile by NGS of 14 melanoma cell lines used in this study.
DOI: 10.6084/m9.figshare.21582458
title: Additional file 4 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 4: Supplementary Table S2. Drug doses used for experiments and effect of each drug at such dose in the MTT assay on each cell line.
DOI: 10.6084/m9.figshare.21582458.v1
title: Additional file 4 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 4: Supplementary Table S2. Drug doses used for experiments and effect of each drug at such dose in the MTT assay on each cell line.
DOI: 10.6084/m9.figshare.21582461
title: Additional file 5 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 5: Supplementary Table S3. Antibodies used in quantitative western blot analysis.
DOI: 10.6084/m9.figshare.21582461.v1
title: Additional file 5 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 5: Supplementary Table S3. Antibodies used in quantitative western blot analysis.
DOI: 10.6084/m9.figshare.21582464
title: Additional file 6 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 6: Supplementary Table S4. Modulation of immune-related genes belonging to 21 functional classes by epigenetic drugs. Sheets # to #21.
DOI: 10.6084/m9.figshare.21582464.v1
title: Additional file 6 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 6: Supplementary Table S4. Modulation of immune-related genes belonging to 21 functional classes by epigenetic drugs. Sheets # to #21.
DOI: 10.6084/m9.figshare.21582467
title: Additional file 7 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 7: Supplementary Table S5. Immune-related gene modulation by epigenetic drugs and by combinatorial treatments.
DOI: 10.6084/m9.figshare.21582467.v1
title: Additional file 7 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 7: Supplementary Table S5. Immune-related gene modulation by epigenetic drugs and by combinatorial treatments.
DOI: 10.6084/m9.figshare.21582470
title: Additional file 8 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 8: Supplementary Table S6. Upstream Regulator analysis on differentially expressed genes in drug-treated vs untreated cell lines VRG100 and CST30.
DOI: 10.6084/m9.figshare.21582470.v1
title: Additional file 8 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 8: Supplementary Table S6. Upstream Regulator analysis on differentially expressed genes in drug-treated vs untreated cell lines VRG100 and CST30.
DOI: 10.6084/m9.figshare.21582473
title: Additional file 9 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 9 Supplementary Table S7. Prognostic significance of genes in the guadecitabine and JQ1 immune-related signatures in the Cancer Genome Atlas (TCGA) melanoma dataset.
DOI: 10.6084/m9.figshare.21582473.v1
title: Additional file 9 of Landscape of immune-related signatures induced by targeting of different epigenetic regulators in melanoma: implications for immunotherapy

description: Additional file 9 Supplementary Table S7. Prognostic significance of genes in the guadecitabine and JQ1 immune-related signatures in the Cancer Genome Atlas (TCGA) melanoma dataset.
DOI: 10.6084/m9.figshare.21582475
title: Additional file 2 of Universal clinical Parkinson’s disease axes identify a major influence of neuroinflammation

description: Additional file 2. Supplementary tables (S1-S5).
DOI: 10.6084/m9.figshare.21582475.v1
title: Additional file 2 of Universal clinical Parkinson’s disease axes identify a major influence of neuroinflammation

description: Additional file 2. Supplementary tables (S1-S5).
DOI: 10.6084/m9.figshare.21582535
title: Additional file 6 of Adaptation of a microbial community to demand-oriented biological methanation

description: Additional file 6. PCA data generation for Fig. 4
DOI: 10.6084/m9.figshare.21582535.v1
title: Additional file 6 of Adaptation of a microbial community to demand-oriented biological methanation

description: Additional file 6. PCA data generation for Fig. 4
DOI: 10.6084/m9.figshare.21582544
title: Additional file 8 of Adaptation of a microbial community to demand-oriented biological methanation

description: Additional file 8: Data generation for illustration of the Kyoto encyclopaedia of genes and genomes (KEGG) pathway of Methanothrix in Fig. 5 of the main manuscript.
DOI: 10.6084/m9.figshare.21582544.v1
title: Additional file 8 of Adaptation of a microbial community to demand-oriented biological methanation

description: Additional file 8: Data generation for illustration of the Kyoto encyclopaedia of genes and genomes (KEGG) pathway of Methanothrix in Fig. 5 of the main manuscript.
DOI: 10.6084/m9.figshare.21582547
title: Additional file 9 of Adaptation of a microbial community to demand-oriented biological methanation

description: Additional file 9: Data generated for calculation of the relative abundance of extracellular proteases and peptidases (Fig. 6A) of the main manuscript.
DOI: 10.6084/m9.figshare.21582547.v1
title: Additional file 9 of Adaptation of a microbial community to demand-oriented biological methanation

description: Additional file 9: Data generated for calculation of the relative abundance of extracellular proteases and peptidases (Fig. 6A) of the main manuscript.
DOI: 10.6084/m9.figshare.21582551
title: Additional file 1 of Alternative approaches to identify core bacteria in Fucus distichus microbiome and assess their distribution and host-specificity

description: Additional file 1. Supplementary Table 1 showing indicator ASVs of F. distichus on Calvert Island for each sampling event in the two-step IndVal.
DOI: 10.6084/m9.figshare.21582551.v1
title: Additional file 1 of Alternative approaches to identify core bacteria in Fucus distichus microbiome and assess their distribution and host-specificity

description: Additional file 1. Supplementary Table 1 showing indicator ASVs of F. distichus on Calvert Island for each sampling event in the two-step IndVal.
DOI: 10.6084/m9.figshare.21582554
title: Additional file 2 of Alternative approaches to identify core bacteria in Fucus distichus microbiome and assess their distribution and host-specificity

description: Additional file 2. Supplementary Table 2 showing overlapping indicator ASVs of F. distichus on Calvert Island across sampling events and their overall specificity to determine core taxa. In step2, F. distichus-indicator ASVs at greater than 0.7 IndVal index are evaluated. 12 bacterial ASVs determined by the two-step approach are in bold.
DOI: 10.6084/m9.figshare.21582554.v1
title: Additional file 2 of Alternative approaches to identify core bacteria in Fucus distichus microbiome and assess their distribution and host-specificity

description: Additional file 2. Supplementary Table 2 showing overlapping indicator ASVs of F. distichus on Calvert Island across sampling events and their overall specificity to determine core taxa. In step2, F. distichus-indicator ASVs at greater than 0.7 IndVal index are evaluated. 12 bacterial ASVs determined by the two-step approach are in bold.
DOI: 10.6084/m9.figshare.21582557
title: Additional file 3 of Alternative approaches to identify core bacteria in Fucus distichus microbiome and assess their distribution and host-specificity

description: Additional file 3. Supplementary Table 3 showing indicator ASVs of F. distichus in the time-series Quadra dataset, including April, May and June samples.
DOI: 10.6084/m9.figshare.21582557.v1
title: Additional file 3 of Alternative approaches to identify core bacteria in Fucus distichus microbiome and assess their distribution and host-specificity

description: Additional file 3. Supplementary Table 3 showing indicator ASVs of F. distichus in the time-series Quadra dataset, including April, May and June samples.
DOI: 10.6084/m9.figshare.21582680
title: Additional file 1 of Effect of gamified flipped classroom on improving nursing students’ skills competency and learning motivation: a randomized controlled trial

description: Additional file 1. Database.
DOI: 10.6084/m9.figshare.21582680.v1
title: Additional file 1 of Effect of gamified flipped classroom on improving nursing students’ skills competency and learning motivation: a randomized controlled trial

description: Additional file 1. Database.
DOI: 10.6084/m9.figshare.21582686
title: Additional file 3 of Akatsuki LIR observing system simulation experiments evaluated by thermal tides in the Venus atmosphere

description: Additional file 3. Data set.
DOI: 10.6084/m9.figshare.21582686.v1
title: Additional file 3 of Akatsuki LIR observing system simulation experiments evaluated by thermal tides in the Venus atmosphere

description: Additional file 3. Data set.
DOI: 10.6084/m9.figshare.21582713
title: Additional file 2 of Nematocyst sequestration within the family Fionidae (Gastropoda: Nudibranchia) considering ecological properties and evolution

description: Additional file 2. Table S2. Specimens used for molecular analysis. Voucher numbers and GenBank accession numbers are given
DOI: 10.6084/m9.figshare.21582713.v1
title: Additional file 2 of Nematocyst sequestration within the family Fionidae (Gastropoda: Nudibranchia) considering ecological properties and evolution

description: Additional file 2. Table S2. Specimens used for molecular analysis. Voucher numbers and GenBank accession numbers are given
DOI: 10.6084/m9.figshare.21582716
title: Additional file 3 of Nematocyst sequestration within the family Fionidae (Gastropoda: Nudibranchia) considering ecological properties and evolution

description: Additional file 3. Table S3. Comparison of NCs types found in nudibranch cnidophages with NCs found in the corresponding prey species.
DOI: 10.6084/m9.figshare.21582716.v1
title: Additional file 3 of Nematocyst sequestration within the family Fionidae (Gastropoda: Nudibranchia) considering ecological properties and evolution

description: Additional file 3. Table S3. Comparison of NCs types found in nudibranch cnidophages with NCs found in the corresponding prey species.
DOI: 10.6084/m9.figshare.21582719
title: Additional file 4 of Nematocyst sequestration within the family Fionidae (Gastropoda: Nudibranchia) considering ecological properties and evolution

description: Additional file 4. Table S4. Cnidosac features, buccal armature morphology and prey species of studied nudibranch species.
DOI: 10.6084/m9.figshare.21582719.v1
title: Additional file 4 of Nematocyst sequestration within the family Fionidae (Gastropoda: Nudibranchia) considering ecological properties and evolution

description: Additional file 4. Table S4. Cnidosac features, buccal armature morphology and prey species of studied nudibranch species.
DOI: 10.6084/m9.figshare.21582739.v1
title: Additional file 1 of Pharmacodynamic mechanisms behind a refractory state in inflammatory bowel disease

description: Additional file 1.
DOI: 10.6084/m9.figshare.21582739
title: Additional file 1 of Pharmacodynamic mechanisms behind a refractory state in inflammatory bowel disease

description: Additional file 1.
DOI: 10.6084/m9.figshare.21582746
title: Additional file 2 of Enteroendocrine peptides, growth, and the microbiome during the porcine weaning transition

description: Additional file 2. Analyses of ASVs, time points, and animal weight by Spearman rank correlation.
DOI: 10.6084/m9.figshare.21582746.v1
title: Additional file 2 of Enteroendocrine peptides, growth, and the microbiome during the porcine weaning transition

description: Additional file 2. Analyses of ASVs, time points, and animal weight by Spearman rank correlation.
DOI: 10.6084/m9.figshare.21582782
title: Additional file 3 of Prescreening of tumor samples for tumor-centric transcriptome analyses of lung adenocarcinoma

description: Additional file 3: Supplementary Table 1. Predesigned primers for targeted polymerase chain reaction (PCR).
DOI: 10.6084/m9.figshare.21582782.v1
title: Additional file 3 of Prescreening of tumor samples for tumor-centric transcriptome analyses of lung adenocarcinoma

description: Additional file 3: Supplementary Table 1. Predesigned primers for targeted polymerase chain reaction (PCR).
DOI: 10.6084/m9.figshare.21582785.v1
title: Additional file 4 of Prescreening of tumor samples for tumor-centric transcriptome analyses of lung adenocarcinoma

description: Additional file 4: Supplementary Table 2. List of differentially expressed genes specific to malignant lung cancer cells.
DOI: 10.6084/m9.figshare.21582785
title: Additional file 4 of Prescreening of tumor samples for tumor-centric transcriptome analyses of lung adenocarcinoma

description: Additional file 4: Supplementary Table 2. List of differentially expressed genes specific to malignant lung cancer cells.