cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0204383.10fu
title: SH0204383.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0204384.10fu
title: SH0204384.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0204385.10fu
title: SH0204385.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.2bwuwn
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Barce fraterna (Say, 1832))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 121 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041458-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ukqr4b
title: Occurrence Download

description: A dataset containing 17451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Tetraonid line transect surveys from Norway: Data from Statskog",
 "Geometry POLYGON((-3.95376 56.72183,34.95376 56.72183,34.95376 72.27817,-3.95376 72.27817,-3.95376 56.72183))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 17451 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0122930-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f83mkh
title: Occurrence Download

description: A dataset containing 75971 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lutra lutra (Linnaeus, 1758)",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen"
 ]
 }
 ]
}

 The dataset includes 75971 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006371-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tuh6vn
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anaphalis zeylanica C.B.Clarke"
 ]
}

 The dataset includes 25 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004396-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x2f86y
title: Occurrence Download

description: A dataset containing 150939 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex canescens L."
 ]
}

 The dataset includes 150939 records from 485 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0108090-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sixjtd
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Citrus ×aurantium var. daidai (Siebold ex Hayata) Makino"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006371-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pw5cx7
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Puccinellia nutkaensis (J.Presl) Fernald & Weath.",
 "HasCoordinate is true",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 23 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004475-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p34zna
title: Occurrence Download

description: A dataset containing 6004 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amborella Baill.)",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Literature Occurrence, Material sample, Specimen, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6004 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137565-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2v95il
title: Occurrence Download

description: A dataset containing 351 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "HasCoordinate is true",
 "TaxonKey is Myotis dasycneme (Boie, 1825)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 351 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006371-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.39cwqs
title: Occurrence Download

description: A dataset containing 1681 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia oncinocarpa Benth.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1681 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004460-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zobgll
title: Occurrence Download

description: A dataset containing 2634 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saimiri sciureus (Linnaeus, 1758)"
 ]
}

 The dataset includes 2634 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014212-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xedm65
title: Occurrence Download

description: A dataset containing 80674183 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is iNaturalist Research-grade Observations"
 ]
}

 The dataset includes 80674183 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011127-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wu4wlq
title: Occurrence Download

description: A dataset containing 643 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus marginatus d'Urv."
 ]
}

 The dataset includes 643 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006372-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9zzb7c
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "OccurrenceStatus is Present",
 "TaxonKey is Solanum immite Dunal"
 ]
}

 The dataset includes 115 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057923-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7fwuz4
title: Occurrence Download

description: A dataset listing the 2144552 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 2144552 records were derived from 26014 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0108082-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15195928
title: SCALE-WIN19 Standard CTD Rosette Data

description: The files here contain the standard CTD bottle and sensor files for the SCALE Winter Cruise. 

Oxygen sensor data is now included - except for stations PUZ, SAZ2, GT1, GTE, GT1, MIZ1 and MIZ2.

For notes on how the data was processed please refer to the SCALE CTD Processing Report.

 




Variable
Units


Temperature
degrees C


Conductivity
S/m


Salinity
PSU


Oxygen in situ/Oxygen theoretical/AOU
mL/L


Oxygen Saturation
%


Density
kg/m3


Chlorophyll
mg/m3


Beam Transmission
%


Beam Attenuation
m
DOI: 10.5281/zenodo.5906670
title: SCALE-WIN19 Standard CTD Rosette Data

description: The files here contain the standard CTD bottle and sensor files for the SCALE Winter Cruise. 

Oxygen sensor data is now included - except for stations PUZ, SAZ2, GT1, GTE, GT1, MIZ1 and MIZ2.

For notes on how the data was processed please refer to the SCALE CTD Processing Report.

 




Variable
Units


Temperature
degrees C


Conductivity
S/m


Salinity
PSU


Oxygen in situ/Oxygen theoretical/AOU
mL/L


Oxygen Saturation
%


Density
kg/m3


Chlorophyll
mg/m3


Beam Transmission
%


Beam Attenuation
m
DOI: 10.5281/zenodo.5906671
title: SCALE-WIN19 Standard CTD Rosette Data

description: The files here contain the standard CTD bottle and sensor files for the SCALE Winter Cruise. Please note due to issues with the oxygen sensor, these values have not been included in this version. Future releases may include this data. For notes on how the data was processed please refer to the SCALE CTD Processing Report.
DOI: 10.60635/c3zc8f
title: Monthly Summary_BCI, Vertical

description: Barro Colorado Island (BCI)Yearly, monthly and daily summary organized in vertical format for long-term trend analysisContains interval average/maximum/minimum/variance statistics plus summary graphsLocation 9°9'42.36"N, 79°50'15.67"WLutz catchment is a 9.73ha protected watershed on BCI. The Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48mThe data from 48m should be considered a separate data series from the data at 42m. Wind speed is significantly higher at 48m due to the distance to the top of the canopy. The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972 and consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.Parameters: air temperature, relative humidity, wind speed and direction, precipitation, sea surface temperature, solar radiation (pyranometer), air pressure, soil moisture, runoff, potential evapotranspiration, wet/dry season starting datesHistorical datasets can be located here: https://smithsonian.figshare.com/articles/dataset/Monthly_Summary_BCI_Vertical/10059458
DOI: 10.15468/dl.evfg6t
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eurycea chisholmensis Chippindale, Price, Wiens & Hillis, 2000)"
 ]
}

 The dataset includes 25 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017235-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.epsn6b
title: Occurrence Download

description: A dataset containing 307 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Plecturocebus ornatus (Gray, 1866))",
 "BasisOfRecord is one of (Human Observation, Specimen)"
 ]
 }
 ]
}

 The dataset includes 307 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017234-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/vtvak6
title: On the publication year of Sericini genera and species described by Brenske in “ Die Serica-Arten der Erde ” (Coleoptera: Scarabaeidae: Sericinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ahrens, Dirk, Bezděk, Aleš (2024): On the publication year of Sericini genera and species described by Brenske in “ Die Serica-Arten der Erde ” (Coleoptera: Scarabaeidae: Sericinae). Zootaxa 5418 (5): 442-470, DOI: 10.11646/zootaxa.5418.5.2, URL: http://dx.doi.org/10.11646/zootaxa.5418.5.2AbstractThe year of publication of Brenske’s species and genera described in his opus “Die Serica -Arten der Erde” is updated following up an overlooked delay of some of the fascicules of the Berliner Entomologische Zeitschrift, namely the volumes 42, 43, and 46. This change affects 201 species group names and 20 genus group names, many of which have been revised in the past three decades, but no change of priority of other names occurred. The spelling of Mericserica oberthueri Brenske, 1899 is corrected.
DOI: 10.15468/23bucu
title: Info Flora Schweiz - Caryophyllaceae

description: This dataset contains the digitized treatments in Plazi based on the original url / website Info Flora (2021): Info Flora Schweiz - Caryophyllaceae., URL: https://www.infoflora.ch/de/flora/caryophyllaceae.html
DOI: 10.15468/dl.mpgqcj
title: Occurrence Download

description: A dataset containing 62258 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zelkova"
 ]
}

 The dataset includes 62258 records from 400 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067502-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/wcuucz
title: Info Flora Schweiz - Cyperaceae

description: This dataset contains the digitized treatments in Plazi based on the original url / website Info Flora (2021): Info Flora Schweiz - Cyperaceae., URL: https://www.infoflora.ch/de/flora/cyperaceae.html
DOI: 10.15468/dl.rsqugs
title: Occurrence Download

description: A dataset containing 15613 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kerria"
 ]
}

 The dataset includes 15613 records from 481 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067506-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/9uspax
title: The Megachilidae (Hymenoptera, Apoidea, Apiformes) of the Democratic Republic of Congo curated at the Royal Museum for Central Africa (RMCA, Belgium)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Nkulu, Alain Tshibungu, Pauly, Alain, Dorchin, Achik, Vereecken, Nicolas J. (2023): The Megachilidae (Hymenoptera, Apoidea, Apiformes) of the Democratic Republic of Congo curated at the Royal Museum for Central Africa (RMCA, Belgium). Zootaxa 5392 (1): 1-103, DOI: 10.11646/zootaxa.5392.1.1, URL: https://mapress.com/zt/article/download/zootaxa.5392.1.1/52546AbstractNatural history collections are a cornerstone of entomology, and the conservation of specimens is the essential prerequisite for the development of research into systematics, biogeography, ecology, evolution and other disciplines. Yet, specimens collected during decades of entomological research conducted in less developed countries across Sub-Saharan Africa on pests, beneficial insects and insect biodiversity in general have largely been exported to be permanently preserved in developed countries, mainly in Europe and the United States of America.This is particularly true for the Democratic Republic of the Congo’s (DRC) diverse wild bee fauna, which has been investigated throughout the colonial period by visiting or resident entomologists and missionaries who have then transferred their collected material primarily to Belgium as part of a wider legacy of scientific exploration and colonialism. Digitizing NHC is one way to mitigate this current bias, by making samples accessible to researchers from the target postcolonial countries as well as to the wider international scientific community.In this study, we compiled and digitized 6,490 specimens records relevant to 195 wild bee species grouped in 18 genera within the biodiverse family Megachilidae, essentially from the colonial era (i.e., mostly between 1905–1960, with additional records up to 1978), and curated at the Royal Museum for Central Africa in Belgium. We provide a detailed catalogue of all records with updated locality and province names, including 29 species only available as type specimens. We also explore the historical patterns of diversity and distribution across DRC, and we provide a list of the research entomologists involved. This study is an important first step that uses digital technologies to democratize and repatriate important aspects of DRC’s natural heritage of insect biodiversity, to stimulate more contemporary field surveys and modern taxonomic revisions, as well as to identify and characterize research gaps and biodiversity shortfalls in some of the less-explored regions of Sub-Saharan Africa.
DOI: 10.15468/fxez2z
title: A catalogue, revision, and regional perspective of Eastern Palaearctic and Oriental oak gall wasps and their inquilines (Hymenoptera: Cynipidae: Cynipini, Synergini, Ceroptresini)

description: This dataset contains the digitized treatments in Plazi based on the original journal article IRENE LOBATO-VILA, ALBA SALA-NISHIKAWA, GEORGE MELIKA, GRAHAM N. STONE, CHANGTI TANG, MAN-MIAO YANG, ZHIQIANG FANG, YING ZHU, YIPING WANG, SUNGHOON JUNG, JAMES A. NICHOLLS, JULI PUJADE-VILLAR (2022): A catalogue, revision, and regional perspective of Eastern Palaearctic and Oriental oak gall wasps and their inquilines (Hymenoptera: Cynipidae: Cynipini, Synergini, Ceroptresini). Zootaxa 5161 (1): 1-71, DOI: 10.11646/zootaxa.5161.1.1, URL: http://dx.doi.org/10.11646/zootaxa.5161.1.1AbstractRecent years have seen rapid advances in the study of Fagaceae-associated gall wasps (Hymenoptera: Cynipidae) of the Eastern Palaearctic and the Oriental (EPO) regions, for both the gall inducing Cynipini (commonly termed oak gall wasps though many species gall non-oak Fagaceae) and the predominantly inquiline tribes Synergini and Ceroptresini. This process has propagated some taxonomic errors and involves many taxa whose taxonomic status is uncertain. To provide a stable foundation for further advance, here we review the taxonomic status of the 212 species (133 oak gall wasps and 79 oak cynipid inquilines) that have been described or recorded in these regions. Of this total, we treat 171 as valid species names (103 oak gall wasps and 68 oak cynipid inquilines) in 20 genera; 22 as synonym names, 13 as incertae sedis, three as nomen dubium, and three as species inquirenda. Callirhytis kunugicola Shinji, 1944 is proposed as syn. nov. of C. kunugicola Shinji, 1943, as Shinji described the same species twice. For all valid species names, we provide taxonomic references, synonyms, and geographical distributions. We summarize what is known of host plant associations and gall locations for gall inducers, and host associations for inquilines. We discuss geographic patterns in the known richness of currently valid species for both groups of organisms, and place this in the context of the biogeography of available Fagaceae host plants. We provide a brief historical review of the study of oak gall wasps and their inquilines in the EPO regions.
DOI: 10.15468/hzdrmj
title: Flora Helvetica - Brassicaceae

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Konrad Lauber, Gerhart Wagner, Andreas Gygax (2018): Flora Helvetica - Brassicaceae. In: Flora Helvetica. Bern: Haupt Verlag: 480-566, ISBN: 978-3-258-08047-5