cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/yswmt-55m27
title: YB5017

description: CB15N::pvanftsZ-eyfp pUJ142d485
description: <strong>Tilt Series Date:</strong> 2007-05-14</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 107.0 eV/Å²,  defocus: 12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> The strain was from Yves Brun and Mike Trimble.  Data collected and processed by Zhuo Li</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2007-05-14-1/rawdata/</p>YB50175140760w1d54000cts12u000.mrc,  Tilt Series (Pixel Size 2.4 nm), 688.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2007-05-14-1/rawdata/YB50175140760w1d54000cts12u000.mrc"
        > <i class="download icon"></i> Download </a></p>

        YB50175140760w1d54000cts12u0001k.rec,  Reconstruction (Pixel Size 4.8 nm), 107.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2007-05-14-1/3dimage_817/YB50175140760w1d54000cts12u0001k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.ryp87n
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Malva neglecta",
 "Country is Bulgaria",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044950-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7sx5ay
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Laniellus langbianis",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044949-250811113504898/datasets/export for details.
DOI: 10.22002/qpdy5-z6g19
title: E.coli MG1655 cells

description: E.coli flagella motor search
description: <strong>Tilt Series Date:</strong> 2008-06-27</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> MG1655</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 300.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in standard media</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-06-27-7/rawdata/</p>sqr1_tgt1.mrc,  Tilt Series (Pixel Size 0.64 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-06-27-7/rawdata/sqr1_tgt1.mrc"
        > <i class="download icon"></i> Download </a></p>

        s1t1_1k.rec,  Reconstruction (Pixel Size 1.28 nm), 492.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-06-27-7/3dimage_3469/s1t1_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.dg9cnq
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Malva neglecta",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044952-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mdhggm
title: Occurrence Download

description: A dataset containing 912 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Malva neglecta",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 912 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044951-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/rdyzj-k8813
title: E.coli MG1655 cells

description: E.coli flagella motor search
description: <strong>Tilt Series Date:</strong> 2008-06-27</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> MG1655</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 300.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in standard media</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, vitrobot</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-06-27-6/rawdata/</p>08jun27b_BOX145_1_00011grl_00004sqh_v01_00002hlh_v02_00002tomo_stack.mrc,  Tilt Series (Pixel Size 0.64 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-06-27-6/rawdata/08jun27b_BOX145_1_00011grl_00004sqh_v01_00002hlh_v02_00002tomo_stack.mrc"
        > <i class="download icon"></i> Download </a></p>

        s4h2v22_1k_.rec,  Reconstruction (Pixel Size 1.28 nm), 351.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-06-27-6/3dimage_3468/s4h2v22_1k_.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jgp69-d4426
title: mrebgfp w/o IPTG

description: Raw data files of mrebgfp w/o IPTG
description: <strong>Tilt Series Date:</strong> 2007-08-16</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Strains constructed by Maira Sandkvist (U. Michigan).  Data collected and processed by Zhuo Li.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2007-08-16-1/3dimage_969/</p>vcmrebgfp10um0001k.rec,  Reconstruction (Pixel Size 2.518 nm), 97.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2007-08-16-1/3dimage_969/vcmrebgfp10um0001k.rec"
        > <i class="download icon"></i> Download </a></p>

        vcmrebgfp10um000.mrc,  Tilt Series (Pixel Size 1.259 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2007-08-16-1/rawdata/vcmrebgfp10um000.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wgmpy-ven45
title: Vesicle TX100

description: Vesicles + TX-100 (725µM DOPC:DOGS at 1.5:1 + 0.1mM TX-100) with 30µM CF4Q, 6µM CheA, 12µM CheW.
description: <strong>Tilt Series Date:</strong> 2014-12-10</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-12-10-31/rawdata/</p>VesicleTX100NEW0001.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-12-10-31/rawdata/VesicleTX100NEW0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        VesicleTX100NEW0001.rec,  Reconstruction (Pixel Size 1.28 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-12-10-31/3dimage_48742/VesicleTX100NEW0001.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/9cxw3-cbx26
title: E.coli Rabbit Ear

description: E.coli flagella motor search .
description: <strong>Tilt Series Date:</strong> 2008-01-15</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> MG1655</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-70.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in standard media with penicillin for 1h, isolate by centrifugation</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-01-15-3/rawdata/</p>s4t2_34k.mrc,  Tilt Series (Pixel Size 0.64 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-01-15-3/rawdata/s4t2_34k.mrc"
        > <i class="download icon"></i> Download </a></p>

        s4t2_34k_1k.rec.mrc,  Reconstruction (Pixel Size 1.28 nm), 245.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2008-01-15-3/3dimage_2836/s4t2_34k_1k.rec.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wkbdt-xgn94
title: Bacillus subtilis ponA mutant

description: JLG639    pbpF::Em pbpG::Km ponA::Sp
description: <strong>Tilt Series Date:</strong> 2013-08-03</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> MJ007, ponA null</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 19500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Polara, UCSFtomo</p>
<strong>Collaborators and Roles:</strong> Javi and Kit Pogliano</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulating bacteria</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-03-14/rawdata/</p>bs6390014.mrc,  Tilt Series (Pixel Size 0.6 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-03-14/rawdata/bs6390014.mrc"
        > <i class="download icon"></i> Download </a></p>

        bs6390014_full.rec,  Reconstruction (Pixel Size 2.4 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-03-14/3dimage_29530/bs6390014_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wfxts-ez102
title: dK 203 0.5h induced

description: dK203 is the dQ167 strain in which dK has also been deactivated. The strain is only inducible for dQ
description: <strong>Tilt Series Date:</strong> 2014-12-25</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-25-6/rawdata/</p>dKhalfhinduced_atlas70008.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-25-6/rawdata/dKhalfhinduced_atlas70008.mrc"
        > <i class="download icon"></i> Download </a></p>

        dKhalfhinduced_atlas70008_full.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-25-6/3dimage_49927/dKhalfhinduced_atlas70008_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/y0rc3-f8114
title: island delete

description: This is the wild type in which the entire island of genes responsible for magnetosome formation has been deleted
description: <strong>Tilt Series Date:</strong> 2014-12-20</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-20-25/rawdata/</p>island_delete_atlas20011.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-20-25/rawdata/island_delete_atlas20011.mrc"
        > <i class="download icon"></i> Download </a></p>

        island_delete_atlas20011_full.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-20-25/3dimage_49808/island_delete_atlas20011_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/nmq84-0te72
title: Cell A. longum

description: Middle of cell. Shows dense dark body
description: <strong>Tilt Series Date:</strong> 2008-02-07</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Eric Matson grew the cells. </p>
<strong>Purification / Growth Conditions / Treatment:</strong> Anaerobic growth on CO2</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-02-07-3/rawdata/</p>sporecell2a.mrc,  Tilt Series (Pixel Size 1.2 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-02-07-3/rawdata/sporecell2a.mrc"
        > <i class="download icon"></i> Download </a></p>

        sporecell2a_full.rec,  Reconstruction (Pixel Size 2.4 nm), 356.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2008-02-07-3/3dimage_1483/sporecell2a_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/cbky2-sev14
title: Bacillus thuringiensis

description: Bacillus thuringiensis ATCC 10792
description: <strong>Tilt Series Date:</strong> 2013-05-30</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus thuringiensis</p>
<strong>Strain:</strong> Bacillus thuringiensis</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> pure spores</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-30-17/rawdata/</p>Bthuringiensis_purespores0003.mrc,  Tilt Series (Pixel Size 0.56 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-30-17/rawdata/Bthuringiensis_purespores0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        3_full.rec,  Reconstruction (Pixel Size 2.24 nm), 818.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-30-17/3dimage_32358/3_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gjyv4-fm903
title: NLBi Fixed 293T

description: L026, WT, fixed
description: <strong>Tilt Series Date:</strong> 2014-07-16</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> HIV and deltaNef</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> fixed w/ 1% formaldehyde</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-07-16-7/rawdata/</p>square02_0007.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-07-16-7/rawdata/square02_0007.mrc"
        > <i class="download icon"></i> Download </a></p>

        square02_0007_full.rec,  Reconstruction (Pixel Size 1.68 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-07-16-7/3dimage_45497/square02_0007_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xyr2t-dew40
title: cc1873 overexpression

description: Raw data files of cc1873 overexpression
description: <strong>Tilt Series Date:</strong> 2007-12-05</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (60.0°, 60.0°), step: °, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Martin Thanbichler</p>
<strong>Purification / Growth Conditions / Treatment:</strong> PYE, induced with Xylose for 6 hours</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2007-12-05-1/rawdata/</p>CC1873_1205_1_orig.st,  Tilt Series (Pixel Size 0.0 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2007-12-05-1/rawdata/CC1873_1205_1_orig.st"
        > <i class="download icon"></i> Download </a></p>

        CC1873_1205_1_full.rec,  Reconstruction (Pixel Size 0.0 nm), 784.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2007-12-05-1/3dimage_19447/CC1873_1205_1_full.rec"
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DOI: 10.22002/kpmfp-v0d22
title: R9deltaEnvdeltaNef MOLT

description: deltaNef, MOLT, fixed
description: <strong>Tilt Series Date:</strong> 2014-08-26</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> HIV and deltaNef</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> fixed w/ 1% formaldehyde</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-26-5/3dimage_46015/</p>L031_grid1_0011_full.rec,  Reconstruction (Pixel Size 1.56 nm), 430.6 MB  
        
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        L031_grid1_0011.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.3 GB  
        
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