cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rqftpw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11173810","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022628-241024112534372/datasets/export for details.
DOI: 10.15468/dl.sxjqn8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11173578","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022627-241024112534372/datasets/export for details.
DOI: 10.15468/dl.9p5hmd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11174935","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022629-241024112534372/datasets/export for details.
DOI: 10.15468/dl.7mcj3q
title: Occurrence Download

description: A dataset containing 165192 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Athene brama (Temminck, 1821)"
 ]
}

 The dataset includes 165192 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022568-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/dtt8-vh83
title: RGBT-1K: A RGB-Thermal Paired dataset

description: In this dataset, we present a novel RGB-Thermal paired dataset, RGBT-1K, comprising 1,000 image pairs specifically curated to support research in multi-modality image processing. The dataset captures diverse indoor and outdoor scenes under varying lighting conditions, offering a robust benchmark for applications in image enhancement, object detection, and scene analysis. The image acquisition process involved using the FLIR A70 thermal camera and the Sony Handycam HDR-CX405, with the latter positioned atop the thermal camera for precise alignment. The dataset then goes through image registration and transformation steps to better align it pixel by pixel for training in learning-based approaches. This setup ensured synchronized RGB and thermal captures, allowing for accurate multi-modal data analysis. Potential applications of this dataset span a wide range of computer vision tasks, including surveillance, autonomous navigation, and medical imaging, making it a valuable resource for academia and industry.
DOI: 10.6084/m9.figshare.27611703.v1
title: Supplementary Material for: Bilateral Pterygium in a Paediatric Cancer Patient taking Vemurafenib: A Case Report

description: Introduction: Anticancer drugs with reactive oxygen species (ROS) inducing mechanisms, such as vemurafenib, have been shown to be effective against various types of cancer. However, the adverse effects of increased oxidative stress have the potential to damage not only cancer cells, but also normal cells such as those in eyes and potentially leading to ocular diseases including pterygium and cataract. 
Presentations: A nine-year-old patient presented with bilateral nasal pterygium and early bilateral cortical cataracts, which are uncommon for his age group. Patient has a background of v-raf murine sarcoma viral oncogene homolog B1 (BRAF) V600E positive pilocytic astrocytoma with anaplastic features, diagnosed at age 2.5 years old. Vemurafenib was commenced at the time of diagnosis. 
Conclusion: We suspect that these ophthalmic findings are associated with his prolonged treatment with vemurafenib which may be of a pathophysiological significance.
DOI: 10.15468/dl.sjk3bx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11175826","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022633-241024112534372/datasets/export for details.
DOI: 10.15468/dl.awa4dv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11175647","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022631-241024112534372/datasets/export for details.
DOI: 10.25820/data.006117
title: Dataset: Fatty Liver and Impaired Hepatic Metabolism Alter the Congener-specific Distribution of Polychlorinated Biphenyls (PCBs) in Mice with A Liver-specific Deletion of Cytochrome P450 Reductase

description: This excel data sheet summarizes quality assurance /quality control (QA/QC) data, including method detection limits (MDL), recovery rates of spiked ongoing precision and recovery standards (OPR) in both blank solvent and tissue matrix, limits of detection in both mass (ng) and concentration (ng/g tissue) from a study investigating the congener specific tissue distribution in mice exposed orally to Aroclor 1254.
description: In addition, data from individual animals are tabulated for PCB homolog group, PCB Class, or individual levels congeners, as appropriate.
description: Methods and other information about the dataset are provided in the readme file.
DOI: 10.15468/dl.7pdsyb
title: Occurrence Download

description: A dataset containing 414 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Machilus gamblei King ex Hook.fil."
 ]
}

 The dataset includes 414 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022634-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13859746
title: Seasonal changes in coral thermal threshold suggest species-specific strategies for coping with temperature variations

description: Data and R code for the paper:

“Seasonal changes in coral thermal threshold suggest species-specific strategies for coping with temperature variations” 

Composed of three data sets:

-Dataset1.csv

-Dataset2.csv

-GenoCoeffs.csv

 

Thermal response of Acropora spp. and Pocillopora verrucosa using photosynthetic efficiency (Fv/Fm)  values measured in situ

————————————————————————————————————————————————

CSV contains data measured in situ in Al Fahal reef used to create Figure 1.  It includes 7 columns

- ID_Experimen: Id assigned to each field experiment included in the study. 

-Species: ID of the two species included in the study Acropora spp. and P. verrucosa

- Replicate: Biological replicates associated with each experiment and sampling time.

- Fv.Fm: Photosynthetic efficiency measured in situ using diving PAM.

-SamplingTime: ID of the sampling time associated to each experiment.

-Date: Date of the field experiment

-EnvT: In situ seawater temperature (daily average) the date of the field experiment.

 

Performance data collected during the CBASS experiment for Acropora spp. and Pocillopora verrucosa 

————————————————————————————————————————————————

CSV contains data measured during the CBASS experiment in tanks used to create Figures 2 and 3 and Table 1.

-ID_Experiment: ID assigned to each field experiment included in the study. 

-Species: ID of the two species included in the study Acropora spp. and P. verrucosa

-Sample Name: ID of each coral fragment placed in the tank

-Site: ID of the colonies treatment if any. All coral colonies were non-treated

-Tank: Tank ID

-Temp: Assay temperature of each tank

-Geno: Biological replicate

-PAM: Fv/Fm values measured after the experiment in the tanks using a diving PAM

-SamplingTime: ID of the sampling time associated with each experiment.

-Date: Date of the experiment

-EnvT: In situ seawater temperature (daily average) the date of the field experiment.

 

Dataset combining thermal thresholds and environmental data to fit lmer models.

———————————————————————————————————————————————

CSV contains data to fit LMER models using experimentally derived ED50 thermal thresholds and in situ data.

-ED50: Thermal thresholds estimated by fitting DRC

-Site: ID of the experiment and sampling time

-Replicate: Biological replicates

-EnvT: In situ seawater temperature (daily average) the date of the field experiment.

-FvFm_Field: Photosynthetic efficiency measured in situ using diving PAM.

-Species: ID of the two species included in the study Acropora spp. and P. verrucosa
DOI: 10.5281/zenodo.13859747
title: Seasonal changes in coral thermal threshold suggest species-specific strategies for coping with temperature variations

description: Data and R code for the paper:

“Seasonal changes in coral thermal threshold suggest species-specific strategies for coping with temperature variations” 

Composed of three data sets:

-Dataset1.csv

-Dataset2.csv

-GenoCoeffs.csv

 

Thermal response of Acropora spp. and Pocillopora verrucosa using photosynthetic efficiency (Fv/Fm)  values measured in situ

————————————————————————————————————————————————

CSV contains data measured in situ in Al Fahal reef used to create Figure 1.  It includes 7 columns

- ID_Experimen: Id assigned to each field experiment included in the study. 

-Species: ID of the two species included in the study Acropora spp. and P. verrucosa

- Replicate: Biological replicates associated with each experiment and sampling time.

- Fv.Fm: Photosynthetic efficiency measured in situ using diving PAM.

-SamplingTime: ID of the sampling time associated to each experiment.

-Date: Date of the field experiment

-EnvT: In situ seawater temperature (daily average) the date of the field experiment.

 

Performance data collected during the CBASS experiment for Acropora spp. and Pocillopora verrucosa 

————————————————————————————————————————————————

CSV contains data measured during the CBASS experiment in tanks used to create Figures 2 and 3 and Table 1.

-ID_Experiment: ID assigned to each field experiment included in the study. 

-Species: ID of the two species included in the study Acropora spp. and P. verrucosa

-Sample Name: ID of each coral fragment placed in the tank

-Site: ID of the colonies treatment if any. All coral colonies were non-treated

-Tank: Tank ID

-Temp: Assay temperature of each tank

-Geno: Biological replicate

-PAM: Fv/Fm values measured after the experiment in the tanks using a diving PAM

-SamplingTime: ID of the sampling time associated with each experiment.

-Date: Date of the experiment

-EnvT: In situ seawater temperature (daily average) the date of the field experiment.

 

Dataset combining thermal thresholds and environmental data to fit lmer models.

———————————————————————————————————————————————

CSV contains data to fit LMER models using experimentally derived ED50 thermal thresholds and in situ data.

-ED50: Thermal thresholds estimated by fitting DRC

-Site: ID of the experiment and sampling time

-Replicate: Biological replicates

-EnvT: In situ seawater temperature (daily average) the date of the field experiment.

-FvFm_Field: Photosynthetic efficiency measured in situ using diving PAM.

-Species: ID of the two species included in the study Acropora spp. and P. verrucosa
DOI: 10.15468/dl.3jfnwj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11176491","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022635-241024112534372/datasets/export for details.
DOI: 10.25820/data.006123
title: Model outputs of surface PM2.5 concentration

description: Exposure to ambient PM2.5 (fine particulate matter with aerodynamic diameter less than 2.5 µm) can lead to adverse health effects. Air quality forecasting of PM2.5 is critical for informing the general public and decision makers to take preventive cautions. Air quality forecasting models of PM2.5 are subject to large uncertainties due to factors such as the incomplete representation of the physical and chemical processes. Here we develop a computationally efficient bias-correction framework to improve surface PM2.5 forecasts in the United States. We developed an ensemble-based Kalman filter (KF) technique focusing on the non-rural areas in the United States and apply the KF technique to outputs of three chemical transport models (GEOS-Chem, WRF-Chem and CMAQ) for the whole month of June 2012. All three models underestimate surface measured PM2.5 concentration by 20-50%, the KF technique is effective in improving the model forecasts by reducing the model bias.
DOI: 10.15468/dl.te76yh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11177799","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022637-241024112534372/datasets/export for details.
DOI: 10.15468/dl.sx6vxs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11176729","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022636-241024112534372/datasets/export for details.
DOI: 10.7273/000004762
title: Full-foliage Apple Canopies in Modern Fruiting Wall Architecture (RGB-D Images)

description: This is a subset of image data (pairs of RGB-depth images) of foliage canopy of apple trees in formal architecture. Images data could be used for deep learning and/or robotic applications. Images were acquired in 2018 apple harvesting season near Prosser, WA using a Kinect V2 sensor with the total of 3480 RGB images (.bmp) and 3480 corresponding depth images (.png).
DOI: 10.7273/000004802
title: Remote Sensing Continuity: A Comparison of HTP Platforms and Potential Challenges with Field Applications

description: In an era of climate change and increased environmental variability, breeders are looking for tools to maintain and increase genetic gain and overall efficiency. In recent years the field of high throughput phenotyping (HTP) has received increased attention as an option to meet this need. There are many platform options in HTP, but ground-based handheld and remote aerial systems are two popular options. While many HTP setups have similar specifications, it is not always clear if data from different systems can be treated interchangeably. In this research, we evaluated two handheld radiometer platforms, Cropscan MSR16R and Spectra Vista Corp (SVC) HR-1024i, as well as a UAS-based system with a Sentera Quad Multispectral Sensor. Each handheld radiometer was used for two years simultaneously with the unoccupied aircraft systems (UAS) in collecting winter wheat breeding trails between 2018-2021. Spectral reflectance indices (SRI) were calculated for each system. SRI heritability and correlation were analyzed in evaluating the platform and SRI usability for breeding applications. Correlations of SRIs were low against UAS SRI and grain yield while using the Cropscan system in 2018 and 2019. Dissimilarly, the SVC system in 2020 and 2021 produced moderate correlations across UAS SRI and grain yield. UAS SRI were consistently more heritable, with Cullis heritability ranging from 0.58 to 0.80. Data standardization and collection windows are important to consider in ensuring reliable data. Furthermore, practical aspects and best practices for these HTP platforms, relative to applied breeding applications, are highlighted and discussed. The findings of this study can be a framework to build upon when considering the implementation of HTP technology in an applied breeding program.
DOI: 10.15468/dl.7dstv7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11179586","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022638-241024112534372/datasets/export for details.
DOI: 10.25820/data.006120
title: Toxicity assessment data from subchronic inhalation exposure to a school air mixture (SAM) of PCBs

description: This dataset is related to research article: Comprehensive subchronic inhalation toxicity assessment of an indoor school air mixture of PCBs. In this research, we generated a school air mixture (SAM) of airborne polychlorinated biphenyls (PCBs), designed to match the profile of an older school from our adolescent cohort study (the AESOP Study). Female Sprague-Dawley rats were exposed either to SAM or filtered air (sham) in nose-only exposure systems, 4 h/day for 4 weeks. Positive control rats (n=6) for neurobehavioral testing were administered 1-bromopropane (1-BP) daily by gavage at a dose of 800 mg/kg for 12 days. Congener-specific air and tissue PCB profiles were assessed using gas chromatography-tandem mass spectrometry for 209 congeners. Comprehensive toxicity assessment was conducted including neurological, immune, endocrine, hematopoietic, and reproductive systems. The underlying molecular and cellular mechanisms were discussed. This dataset provides congener-specific profile for generated PCB vapor, and the tissue congener-specific PCB profile normalized by fresh weight. All the other original toxicity assessment data were available in this dataset.
DOI: 10.7273/000002784
title: Quantitative Investigation of Undergraduate Student and Practitioner Perceptions in Civil Engineering