cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27611751.v3
title: <b>Clinical features and plasma metabolites analysis in Chinese obese children with</b><b>nonalcoholic fatty liver disease</b>

description: <b>Objective:</b>This study aimed to investigate the clinical characteristics and plasma metabolites of nonalcoholic fatty liver disease (NAFLD) in Chinese obese children, and to develop machine learning-based NAFLD diagnostic models.<b>Methods: </b>We recruited 222 obese children aged 4 to 17 years and divided them into an obese control group (OC) and an obese NAFLD group (ON) based on liver ultrasonography. Mass spectrometry metabolomic analysis was used to measure 106 metabolites in plasma. Binary logistic regression was used to identify NAFLD-related clinical variables. NAFLD-specific metabolites were illustrated via volcano plots, cluster heatmaps and metabolic network diagram. Additionally, we applied eight machine learning methods to construct three diagnostic models based on clinical variables, metabolites, and clinical variables combined with metabolites.<b>Results: </b>By evaluating clinical variables and plasma metabolites, we identified 16 clinical variables and 14 plasma metabolites closely associated with NAFLD. We discovered that the level of 18:0-22:6 phosphatidylethanolamines was positively correlated with the levels of total cholesterol, triglyceride-glucose index, and triglyceride to high-density lipoprotein cholesterol ratio, whereas the level of glycocholic acid was positively correlated with with the levels of alanine aminotransferase, gamma-glutamyl transferase, insulin, and the homeostasis model assessment of insulin resistance. Additionally, we successfully developed three NAFLD diagnostic models that showed excellent diagnostic performance (areas under the receiver operating characteristic curves of 0.917, 0.954 and 0.957, respectively).<b>Conclusion:</b> We identified 16 clinical variables and 14 plasma metabolites associated with NAFLD in obese Chinese children. Diagnostic models using these features showed excellent performance, indicating their potential for diagnosis.
DOI: 10.1285/i22402772a9p369
title: In erinnerung an Dieter Nörr
DOI: 10.15468/dl.42wnur
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1155970","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022807-241024112534372/datasets/export for details.
DOI: 10.1285/i22402772a9p373
title: Atti della Giornata di studi tardoantichi in onore di Giovanni de Bonfils
DOI: 10.25820/data.006237
title: Dataset for physical activity intervention tailored to rural men pilot

description: This dataset represents a study designed to test the feasibility, acceptability, and preliminary efficacy of a single-arm remotely-delivered intervention (10 weeks, 11 online modules) that promotes physical activity. Data was collected at baseline (prior to the intervention), during the intervention (via Fitbit), and post-intervention (after the intervention). Data was collected via surveys on Qualtrics software, Fitbits using Fitbit API and account logins, and musculoskeletal tests (pushup, sit up, and squat) performed on Zoom. RStudio was used to clean and analyze data.
description: Description of methods used for collection/generation of data: Survey data was exported from Qualtrics as a raw csv with identifying information removed. Fitbit data was exported using FitbitR package that utilizes the Fitbit API (documentation on Fitbit webpage). RStudio was used for all data analysis.
DOI: 10.25820/data.006157
title: Metabolomics Dataset for The Effects of Benoxacor on the Liver and Gut Microbiome of C57BL/6 Mice

description: This dataset summarizes the data from the targeted liquid chromatography-mass spectrometry (LC-MS) metabolomics analysis of serum and liver tissue from thirty-two four-week-old male C57BL/6J mice exposed between 9 and 11 A.M. to corn oil (p.o., 10 ml/kg b.w.) or to benoxacor in corn oil for a final dose (p.o., 0.5 mg/kg b.w., 5 mg/kg b.w., or 50 mg/kg b.w.).
description: Description of methods used for collection/generation of data: 

Mice were exposed for three consecutive days between 9 and 11 A.M. to corn oil (p.o., 10 ml/kg b.w.) or to benoxacor in corn oil for a final dose (p.o., 0.5 mg/kg b.w., 5 mg/kg b.w., or 50 mg/kg b.w.). Each exposure group (0, 0.5, 5, and 50 mg/kg b.w. benoxacor) consisted of 8 mice (2 cages of 4 animals/cage). Animals were euthanized 24 h after the final dose by carbon dioxide (CO2) asphyxiation, followed by the harvest of vital tissues. The IACUC of the University of Iowa approved all methods (protocol number: 0082057-001). Whole blood was obtained via cardiac puncture, immediately transferred to a MiniCollect serum separator (Greiner Bio-One, Kremsmunster, Austria), and kept on ice for a minimum of 30 minutes to allow the blood to clot. The serum was collected through centrifugation at 1503 g at 4 øC for 20 minutes. Serum was transferred to 1.5 mL plastic tubes (Eppendorf North America, Canada) and stored at -80 øC until further analysis. Liver tissue was excised and flash-frozen in liquid nitrogen for metabolomics measurements. All liver samples were stored at -80 øC until analysis. 

Targeted metabolomic data were collected with a screening list containing 361 metabolites following protein precipitation with methanol at the Northwest Metabolomics Research Center (University of Washington, Seattle, Washington) in the mouse liver and serum. Briefly, samples were extracted and analyzed in the multiple-reaction-monitoring (MRM) mode on XBridge BEH Amide XP columns (Waters Technologies Corporation, Milford, MA, USA) with an AB Sciex 6500+ Triple Quadrupole MS equipped with ESI ionization source in the ESI- and ESI+ ionization mode. In liver samples, 172 metabolites were measured, while 173 metabolites were quantified in the plasma samples. Generated MS data for the tissue samples were normalized versus BCA total protein count. The MS data for the plasma samples were not normalized. 

Describe any quality-assurance procedures performed on the data: 

A pooled human serum sample was used to monitor system performance, and pooled study samples were used to monitor data reproducibility. Both sample batches (32 tissue and 32 plasma samples) generated reproducible data with an average coefficient of variances (CVs) of 5.6 to 6.9%.
DOI: 10.1285/i22402772a9p375
title: Giornata di studi in onore di Giovanni de Bonfils
DOI: 10.1285/i22402772a9p376
title: Gianni de Bonfils, 'tardoantichista' pervicace e raffinato
DOI: 10.6084/m9.figshare.26962261
title: final.gene.pep.faa

description: Protein sequence file
DOI: 10.6084/m9.figshare.26962261.v1
title: final.gene.pep.faa

description: Protein sequence file
DOI: 10.1285/i22402772a9p383
title: Gianni De Bonfils, ricerca e metodo
DOI: 10.6084/m9.figshare.27569673
title: liqlens3dimg_cnmfw3

description: Calcium signals extracted with CNMFw3(github.com/yuichirohayashi/CNMFw3.
DOI: 10.6084/m9.figshare.27569673.v1
title: liqlens3dimg_cnmfw3

description: Calcium signals extracted with CNMFw3(github.com/yuichirohayashi/CNMFw3.
DOI: 10.1285/i22402772a9p391
title: Sul filo della memoria
DOI: 10.1285/i22402772a9p406
title: 'Modernità' del Tardoantico
DOI: 10.1285/i22402772a9p412
title: Due riferimenti di Ammiano Marcellino all'imperatore Giuliano
DOI: 10.1285/i22402772a9p415
title: Gianni de Bonfils e la legislazione 'De Iudaeis'
DOI: 10.1285/i22402772a9p419
title: Giovanni de Bonfils: profilo identitario di un giusromanista
DOI: 10.6084/m9.figshare.26962264
title: final.gene.cds.fa

description: Genome annotation file
DOI: 10.6084/m9.figshare.26962264.v1
title: final.gene.cds.fa

description: Genome annotation file
DOI: 10.1285/i22402772a9p426
title: Il Maestro e l'allievo
DOI: 10.1285/i22402772a9p428
title: Giovanni de Bonfils e Flavio Mallio Teodoro
DOI: 10.6084/m9.figshare.26962267
title: final.gene.gff3

description: Genome annotation file
DOI: 10.6084/m9.figshare.26962267.v1
title: final.gene.gff3

description: Genome annotation file
DOI: 10.1285/i22402772a9p433
title: Recensioni e Segnalazioni
DOI: 10.1285/i22402772a9p435
title: Laura D'Amati, L'inattività del convenuto nel processo formulare: 'indefensio', 'absentia', e 'latitatio'
DOI: 10.1285/i22402772a9p443
title: Adolfo Wegmann Stockebrand, Obligatio re contracta. Ein Beitrag zur sogenannten Kategorie der Realverträge im Römischen Recht
DOI: 10.25820/data.006135
title: Dataset Describing Biodegradation of Individual Polychlorinated Biphenyl Congeners (PCBs) by Paraburkholderia xenovorans LB400 in presence and absence of sediment slurry

description: This dataset describes the biodegradation of polychlorinated biphenyl (PCB) congeners by Paraburkholderia xenovorans LB400 in absence and presence of PCB-contaminated sediment slurry, over time (Bako et. al., In Review). These experiments were designed to further understand how biodegradation of PCB-degrading microorganisms can be limited by slow mass transfer of PCB molecules from the sediment particles to living cells. The data resulting from these experiments can inform future experimental design and be reused by other researchers for further analysis and / or interpretive insights.
description: In absence of sediment, PCBs were extracted from aqueous bioreactors by liquid-liquid extraction (LLE) with hexane. In presence of sediment, the extraction method used was a modification of U.S. EPA Method 3545. Sediment slurry samples were extracted from bioreactors using pressurized fluid extraction (Accelerated Solvent Extractor; Dionex ASE-200) with equal parts acetone and hexane. GC-MS/MS triple quadrapole technology in multiple reaction monitoring mode (MRM) was used for identification and quantification of 209 PCBs as 174 chromatographic peaks. Samples were processed in batches of five along with one method blank per batch. All materials used in sample extraction had either been triple rinsed with solvent (methanol, acetone, and hexane) or combusted overnight at 450°C to prevent background PCB contamination. Results from the method blanks were used to determine the limit of quantification (LOQ) as the upper limit of the 95% confidence interval (average mass plus two times the standard deviation). PCB congener masses were corrected for surrogate recoveries less than 100%. The PCB concentration dataset was dichotomized at the threshold of the congener specific LOQ. Concentrations of congeners below the LOQ were treated as zero.
DOI: 10.1285/i22402772a9p455
title: Chr. Baldus, Chr. Hattenhauer, Kl.P. Schroeder (Hrsg.), Geschichtliche Rechtswissenschaft. 100 Jahre Heidelberger Institut (1918-2018)
DOI: 10.15468/dl.qtxhg6
title: Occurrence Download

description: A dataset listing the 39471 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Botanical Database of Southern Africa (BODATSA): Botanical Collections"
 ]
}

 The dataset's 39471 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022723-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1285/i22402772a9p464
title: Jürgen Blänsdorf, Das Thema der Sklaverei in den Werken Ciceros, Forschungen zur antiken Sklaverei
DOI: 10.1285/i22402772a9p470
title: Evelyn Höbenreich, Marianne Webers «Ehefrau und Mutter in der Rechtsentwicklung». Beziehungsmodelle zwischen römischem Recht und deutscher Kodifizierung
DOI: 10.6084/m9.figshare.26962270
title: genome.fasta

description: Genome assembly and annotation of Firmiana kwangsiensis.
DOI: 10.15468/dl.zfkzq6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1155993","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022810-241024112534372/datasets/export for details.
DOI: 10.15468/dl.r6etse
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1155990","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022809-241024112534372/datasets/export for details.
DOI: 10.15468/dl.4evpth
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monochamus sutor sutor"
 ]
}

 The dataset includes 123 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022812-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4u58bm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1155973","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022808-241024112534372/datasets/export for details.
DOI: 10.15468/dl.xedfne
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is biodiversity-yellow-river-basin-wetland"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022811-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25820/data.006673
title: Static structure factor data for a 2D Yukawa liquid

description: Simulation data for the static structure factor S(k, N) provided here correspond to the paper "Finite-size effects in the static structure factor S(k) and S(0) for a 2D Yukawa liquid" by V. Zhuravlyov, J. Goree, P. Elvati, and A. Violi, submitted to Physical Review E in 2023. These data were obtained by analyzing particle-position data for a molecular dynamics simulation of a two-dimensional Yukawa liquid, as described in that paper. The simulation parameters include: screening parameter kappa = 0.719, Coulomb coupling parameter Gamma = 130, and total number of particles = 937501 with periodic boundary conditions in a square region. Our analysis of S(k, N) was repeated for 20 values of N, the number of particles in the analyzed region.
description: The static structure factor S(k, N) was obtained directly from particle positions. Those particle positions were the output from a molecular dynamics simulation that was performed using LAMMPS code [S. Plimpton, J. Comput. Phys. 117, 1 (1995)]. 

The overall calculation of S(k, N) was repeated for 20 analyzed regions that contain different number of particles N. More information on methods and analysis can be found in the linked publication which cites this dataset.
DOI: 10.1285/i22402772a9p477
title: Tommaso Beggio, Paul Koschaker (1879-1951). Rediscovering the Roman Foundations of European Legal Tradition
DOI: 10.1285/i22402772a9p483
title: Mario Fiorentini, Il giurista e l'eretico. Critica delle fonti e irenismo religioso nella prima età moderna
DOI: 10.15468/dl.cc8h3f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1155995","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022813-241024112534372/datasets/export for details.
DOI: 10.15468/dl.mw6zek
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1155996","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022814-241024112534372/datasets/export for details.
DOI: 10.1285/i22402772a9p495
title: Antonino Milazzo, Il contratto di comodato. Modelli romani e disciplina moderna
DOI: 10.15468/dl.8q27u7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1156020","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022815-241024112534372/datasets/export for details.
DOI: 10.1285/i22402772a9p498
title: Sebastian Stepan, 'Scaevola noster'. Sulla possibile influenza di Cervidio Scevola nei libri disputationum di Trifonino
DOI: 10.6084/m9.figshare.26005465
title: Data preparation for "Globally varied complementarity and selection effects in driving plant diversity effects on productivity"

description: The code show how to obtain the mixture-level data for diversity effect analyses from the species-level data (Data_IND_All_240506.csv).
DOI: 10.6084/m9.figshare.26005465.v1
title: Data preparation for "Globally varied complementarity and selection effects in driving plant diversity effects on productivity"

description: The code show how to obtain the mixture-level data for diversity effect analyses from the species-level data (Data_IND_All_240506.csv).
DOI: 10.1285/i22402772a9p512
title: Orazio Licandro, Augusto e la res publica imperiale. Studi epigrafici e papirologici
DOI: 10.15468/dl.rs98j4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1156021","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022816-241024112534372/datasets/export for details.
DOI: 10.1285/i22402772a9p519
title: E. Fiocchi Malaspina, L'eterno ritorno del Droit des gens di Emer de Vattel (secc. XVIII-XIX). L'impatto sulla cultura giuridica in prospettiva globale