cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3564222.v1
title: Appendix B. Tables showing live tree diameter size class distributions, snag diameter size class distributions, diameter class distribution of biomass of dead and downed wood &gt;12 cm at the large end and &gt;3 m long, and breakdown of the percentage of total understory cover by shrubs, forbs, and graminoids by forest structural class and type in Oregon, Washington, and inland Northern California.

description: Tables showing live tree diameter size class distributions, snag diameter size class distributions, diameter class distribution of biomass of dead and downed wood &gt;12 cm at the large end and &gt;3 m long, and breakdown of the percentage of total understory cover by shrubs, forbs, and graminoids by forest structural class and type in Oregon, Washington, and inland Northern California.
DOI: 10.6084/m9.figshare.25886104.v1
title: Supplementary Material for: Eosinophilic pleocytosis in the cerebrospinal fluid following CAR-T cell therapy for CNS lymphoma: A case for warning?

description: Introduction: CAR-T cell therapy, emerging as an efficient treatment option for patients with secondary central nervous system (CNS) lymphoma, is frequently complicated with immune effector cell-associated neurotoxicity syndrome (ICANS). Case Presentation: We report a case of a 64-year-old woman with transformed follicular lymphoma, developing high-grade ICANS with eosinophilic pleocytosis following third-line therapy with CAR-T cells (tisagenlecleucel). During bridging therapy, she declined neurologically and was diagnosed with secondary CNS lymphoma. She received methotrexate-cytarabine-thiotepa-rituximab regimen with clinical and radiological improvement. Post-CAR-T cell infusion she developed cytokine release syndrome grade II and ICANS grade III. Given the lack of response to steroids, anakinra was initiated with complete ICANS resolution. Cerebrospinal fluid (CSF) analysis, performed only on day +10 due to thrombocytopenia, revealed eosinophils, while infections were excluded. Conclusion: This report emphasizes the importance of CSF analysis in individuals with CAR-T-related neurotoxicity for elucidating the role of specific immune cells in such complications.
DOI: 10.6084/m9.figshare.21711005.v1
title: Supplementary Material for: Incidence of Intermittent Hypoxemia Increases during Clinical Care and Parental Touch in Extremely Preterm Infants

description: <b><i>Objectives:</i></b> An increased frequency of intermittent hypoxemia (IH) is associated with a higher risk for poor developmental outcomes, disability, or death in extremely preterm infants. The objective of the prFesent study is to quantify the effect of hands-on medical and parental interventions on the incidence of IH in extremely preterm infants. <b><i>Methods:</i></b> An observational design with intraindividual comparisons was used. Blood oxygen saturation levels (SpO<sub>2</sub>) and time-lapse video were recorded. Frequency, duration, and time to occurrence of IH (SpO<sub>2</sub> &lt;80% for ≥10 s) were compared between nursing and medical care (NMC), health care by parents, skin-to-skin contact (SSC), touch in incubator, physiotherapy, and rest. Each infant was observed for six consecutive 24-h periods. Inclusion criteria were as follows: gestational age ≤28 weeks, birth weight &lt;1500 g, postnatal age 0–6 weeks, gavage feeding, no severe illnesses or invasive procedures, no mechanical ventilation. <b><i>Results:</i></b> The highest proportion of time with IH occurred during NMC (2.49%) and incubator touch (1.32%), the lowest during SSC (0.74%) and health care by parents (0.67%). IH frequency per hour was highest during NMC (2.95, IQR 1.19–4.01) and lowest during SSC (0.88, IQR 0.37–2.32, <i>p</i> &lt; 0.001). While an increase in IH during NMC was expected, the high incidence during incubator touch was surprising. Parental touch in the incubator is intended to be soothing, not stressful. <b><i>Conclusions:</i></b> Future studies need to clarify how preterm infants process touch, which attributes of touch are fundamental trigger mechanisms of IH, and which handling strategies are most effective in lowering the incidence of IH during hands-on medical care.
DOI: 10.6084/m9.figshare.28632026.v1
title: Supplementary Material for: Risk of hospital admissions and death in patients with heart failure and chronic kidney disease: findings from a novel multidisciplinary clinic

description: Introduction:
Patients with heart failure (HF) and chronic kidney disease (CKD) are often sub-optimally treated due to concerns of hyperkalaemia, declining kidney function, and hypotension. They commonly suffer from fluid overload which can lead to frequent hospitalisations and death. This research aims to determine the characteristics associated with hospital admissions and death in patients with CKD and HF.
Methods:
Consecutive patients with CKD stage 3 to 5 and HF (regardless of ejection fraction) attending a large, specialised CKD-HF clinic between 12/Sept/2019 and 11/Nov/2021 were identified and data were collected on demographic factors, renal and heart function, medications, hospitalisations, and death. Multinomial and Cox regressions determined the characteristics of patients requiring hospitalisation and their risk of death, respectively. 
Results:
A total of 667 admissions were attributable to 318 patients, 201 admissions were for HF. Men were less likely than women to have been admitted to hospital for HF (RR 0.43, 95% CI 0.20, 0.94) and non-HF causes (RR 0.21, 95% CI 0.10, 0.47). A serum haemoglobin level greater than 100 g/L was associated with fewer HF and non-HF admissions compared to a serum haemoglobin less than 100 g/L (RR 0.26, 95% CI 0.09, 0.74; RR 0.17, 95% CI 0.06, 0.47). Compared to CKD stage 3, CKD stage 4 was associated with an increased risk of HF and non-HF admissions (RR 4.01, 95% CI 1.04, 15.5; RR 4.33, 95% CI 1.13, 16.5). Having a HF admission (HR 2.41, 95% CI 1.27, 4.60), HFrEF (HR 2.18, 95% CI 1.30, 3.63)), CKD stage 4 (HR 1.91, 95% CI 1.16, 3.16), and loop diuretic use (HR 2.24, 95% CI 1.14, 4.40) were associated with a significantly increased risk of death compared to people with no admissions, with HFpEF, CKD stage 3, and no diuretic use, respectively. The use of RAAS inhibitors halved the risk of death compared to non-prescribed patients (HR 0.44, 95% CI 0.27, 0.72). 
Conclusion:
Hospital admissions among CKD-HF patients were common, particularly in those with lower serum haemoglobin levels and advanced CKD stage. The risk of death was higher in those with HF admissions, the presence of HFrEF, advanced CKD stage, loop diuretic use, and those not prescribed RAAS inhibitors.
DOI: 10.6084/m9.figshare.20334756.v1
title: Predicting Admissions from Triage at a Paediatric Emergency Department - Dataset

description: The final nine variable de-identified dataset used in the paper ‘Development of a low-dimensional model to predict admissions from triage at a paediatric emergency department’ has been provided (outcome and eight predictors). <strong>Any research that makes use of this dataset must reference the original study:</strong> Leonard, F, Gilligan, J, Barrett, MJ. Development of a low-dimensional model to predict admissions from triage at a pediatric emergency department. <em>JACEP Open</em>. 2022; 3:e12779. https://doi.org/10.1002/emp2.12779
DOI: 10.6084/m9.figshare.23734164.v1
title: Blood Group Detection with ECG

description: Blood Group Detection with ECG
DOI: 10.6084/m9.figshare.8227229.v1
title: Personality Inventory for DSM-5 (PID-5): cross-cultural adaptation and content validity in the Brazilian context

description: Abstract Objective To describe the process of cross-cultural adaptation of the Personality Inventory for DSM-5 (PID-5) to the Brazilian context. Methods Cross-cultural adaptation involved the steps of independent translation of the instrument, synthesis version, and back-translation. Analysis of content validity was conducted by a multidisciplinary expert committee and consisted of quantitative assessment of agreement indicators. The test was then applied to a target population. Results All the steps required for a cross-cultural adaptation were followed and satisfactory agreement values (≥ 4.75) were reached for most of the structures assessed. Most of the changes suggested by the experts were followed; these changes consisted primarily of adjustments to verb tense and agreement and the inclusion of letters and words to allow gender inflection. In the pre-test, no suggestions were made and the instrument was considered comprehensible. Conclusion The Brazilian version of the PID-5 was found to be adequate to the Brazilian context from semantic, idiomatic, cultural, and conceptual perspectives. The Brazilian version assessed here can be freely used, was approved by the publishers who hold the copyright on the instrument, and is considered the official version of the instrument. New studies are underway to determine the validity and reliability of the PID-5.
DOI: 10.6084/m9.figshare.28784405.v1
title: Adversarial Attack (Erosion and Dilation) Dataset for Amazon River Basin

description: This dataset comprises 1,263 high-resolution SAR image patches (512×512) from Sentinel-1 covering the Amazon River Basin, curated for water body segmentation tasks. The region was selected for its complex river networks and variability in channel structures, making it ideal for robust model training and evaluation. Sentinel-1 GRD products were acquired via the Alaska Satellite Facility (ASF) API and underwent standard preprocessing steps, including orbit file application, radiometric calibration, speckle filtering, and terrain correction using a DEM. Ground truth masks were generated using Sentinel-2 multispectral imagery through the Normalized Difference Water Index (NDWI), computed in Google Earth Engine. This method was adopted after observing inaccuracies with publicly available shapefiles due to outdated or incomplete information. The final dataset offers a reliable benchmark for water segmentation models in SAR imagery, addressing the challenges of geometric complexity, label accuracy, and large-area coverage.
DOI: 10.6084/m9.figshare.15241017.v2
title: Parameters of a 54-bus distribution network

description: Parameters of a 24-bus distribution network，only considering the case where some lines have faults (10), including parameters such as lines, transformers, substations, etc.
DOI: 10.6084/m9.figshare.20135003.v1
title: Simultaneous imaging of ER-lysosome interactions

description: MAI-SIM data of lysosome-ER interactions imaged in simultaneous acquisition.
DOI: 10.6084/m9.figshare.3103120.v1
title: A Simple yet Accurate Method for the Estimation of the Biovolume of Planktonic Microorganisms (Datasets)

description: This fileset is linked to the article: <b>"A Simple yet Accurate Method for the Estimation of the Biovolume of Planktonic Microorganisms"</b> and includes the <b>S1 File</b> and the <b>S2 file</b> cited in the text. The former shows the biovolume estimation error of the proposed method in comparison to other previously advised ones on the simple or composite geometric shapes shown in <b>Fig. 1</b> (included in the article); the latter presents similar outcomes but related to the 3D model shapes shown in <b>S4 Fig</b>. (supporting information).
DOI: 10.6084/m9.figshare.28227158.v1
title: Inquiry in Education.xlsx

description: This research investigates the antecedents of epistemic curiosity—an intrinsic desire for knowledge—and the mediating role of emotional intelligence among teaching professionals. Using a quantitative design, 203 educators from Indian institutions completed standardized measures, including scales for epistemic curiosity, emotional intelligence, intellectual humility, and grit. Data analysis through correlations, multiple regression, and mediation analysis revealed significant relationships, with emotional intelligence emerging as a strong predictor and mediator. Specifically, emotional intelligence mediated the relationship between intellectual humility and epistemic curiosity (β = 0.099, p &lt; .001) and between grit and epistemic curiosity (β = 0.121, p &lt; .001). The findings underscore the importance of emotional intelligence in fostering curiosity-driven learning and professional development, offering practical insights for cultivating intellectually curious and emotionally competent educators to enhance academic engagement and teaching efficacy.
DOI: 10.6084/m9.figshare.14230256.v1
title: Data/Code To Accompany "Muscle Transcriptional Networks Linked to Resistance Exercise Training Hypertrophic Response Heterogeneity”

description: Code and relevant items to accompany "Muscle Transcriptional Networks Linked to Resistance Exercise Training Hypertrophic Response Heterogeneity” (Lavin & Bell, et al., Physiol Genomics submission). This code describes application of network biology tools WGCNA and PLIER to phenotypic exercise data. Please see README file for further details.<br>
DOI: 10.6084/m9.figshare.23259860.v1
title: Supplementary Material for: Clinical and proteomic-based molecular characterizations of invasive and noninvasive somatotroph PitNETs

description: Introduction Somatotroph pituitary neuroendocrine tumours (PitNETs) are characterized by complex and variable biological behaviours with unpredictable patterns of growth and invasiveness. The molecular mechanisms and reliable predictors of biological markers of invasiveness remain unknown. Methods Seventy-two acromegaly patients were consecutively enrolled. Data-independent acquisition (DIA)-based proteomics and Ingenuity Pathway Analysis (IPA) were conducted between invasive and noninvasive somatotroph PitNETs. The expression of selected biomarkers was verified in PitNET tissue, and its correlation with various clinical indicators and outcomes of these tumours was assessed. The invasive phenotypes of GH3 cells were validated in vitro. Results Patients with invasive somatotroph PitNETs were significantly younger at onset and diagnosis, with significantly higher secretion and faster growth and a lower long-term biochemical response rate than patients with noninvasive somatotroph PitNETs. Proteomic data were evaluated in a consecutively collected sample of 19 (10 invasive and 9 noninvasive somatotroph PitNETs) tumours and indicated a distinct proteomic pattern. The enriched and important pathways included IL-4, PDGF, PTEN, VEGF, PI3K/AKT, FAK and other pathways that were significantly associated with tumour proliferation, migration, and invasion. High cathepsin Z (CTSZ) expression was found in invasive somatotroph PitNETs and significantly positively correlated with parameters of tumour invasion and growth. In Ctsz-overexpressing GH3 cells, cell proliferation, invasion and migration were consequently increased. Conclusion It is more difficult for patients with invasive somatotroph PitNETs to achieve remission than those with noninvasive somatotroph PitNETs, and proteomic data analysis has revealed the high expression of CTSZ as a contributing factor to invasive transformation and poor prognosis in somatotroph PitNETs for the first time.
DOI: 10.6084/m9.figshare.19169756.v1
title: Genes characterized in the Salminus brasiliensis genome

description: Characterized genes from <i>S. brasiliensis</i> identified with the Ostariophysi database from NCBI.
DOI: 10.6084/m9.figshare.28351121.v1
title: Digital financial service data.sav

description: The research was socioeconomic research on factors affecting adoption and intensity of digital finance among rural respondents in Kambata Tambaro Zone, Ethiopia. The data was collected from 399 respondents (105 adopters and 294 non-adopters of digital finance).The study used cross-sectional research data, which was collected in 2024.The data was collected after ethics approval from the ethics commitee.
DOI: 10.6084/m9.figshare.28327118.v2
title: Data for "A neural mechanism for learning from delayed postingestive feedback"

description: Data for "A neural mechanism for learning from delayed postingestive feedback"Github: https://github.com/cazimmerman/cta<br>bioRxiv: https://doi.org/10.1101/2023.10.06.561214
DOI: 10.15468/dl.qf7knd
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Phyllospadix japonicus Makino, Ruppia maritima L.)",
 "Year 2000-2025"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009569-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.17701199.v1
title: EEG Dataset for RSVP and P300 Speller Brain-Computer Interfaces

description: EEG dataset for subject 38
DOI: 10.6084/m9.figshare.26789320.v1
title: Data from Master thesis: " Determining priority areas for conservation: a spatially explicit approach applied to Alpine flora."

description: Thanks to the Prioritizr package on RStudio, we defined protected areas in Switzerland for the conservation of three taxa (spermatophytes, bryophytes and pteridophytes).We also evaluated the use of spermatophyte like umbrella species for the bryophytes and pteridohytes, which are often forgotten in conservation plans.
DOI: 10.6084/m9.figshare.14778417.v1
title: Regularity of locomotion

description: The table columns are Id : unique identifier for the participant untrained_flag : integer value (=1 for Untrained subject, =0 for Trained subject) gender : integer value (=1 for Female; =2 for Male) RIstart : value of Regularity at start of first locomotor stage of the Bruce Test Tpeak : time in minutes of the peak of Regularity RIpeak :value of peak of Regularity observed during the Bruce Test performance Tend : time in minutes of the end of the Bruce Test RIend : value of Regularity at the end of the Bruce Test RIsharp : second-order coefficient of the parablole fitting the Regularity variable profile during the Bruce Test Ttransition : time in minutes of the walk-to-run transition Ttransition2peak : duration in minutes of the interval between walk-to-run transition and peak or Regularity profile DeltaTexhaustion : duration in minutes of the interval between peak or Regularity profile and the end of the Bruce test <br> Time values, in minutes, are referred to a time 0 corresponding to the start of the Bruce test where the first stage is a resting stage, without locomotion). Therefore a time value of 3 (min) corresponds to the initiation of the first locomotor stage of the Bruce Test, a time value of 6 (min) corresponds to the initiation of the Bruce Test second locomotor stage, and so on. Durations, in minutes, are referred to intervals between specific events. Second order coefficient value is related to the second order polynomial fitting the regularity profile of a specific Bruce test performance. Its dimension is T<sup>-2</sup> Regularity values may range between 0 (for no regularity at all, characteristic of a random profile) to 1 (for perfect periodicity, i.e. an acceleration profile which repeats itself at each stride). <br>
DOI: 10.6084/m9.figshare.24504127.v1
title: PMC-Patients Meta Data

description: <pre>## PMC-Patients Meta Data<br><br>Meta data for PMC-Patients that might facilitate reproduction or usage of our dataset, consisting of the following files (most of which can be derived from our main files above).<br><br>### PMIDs.json<br><br>PMIDs of articles from which PMC-Patients are extracted.<br>List of string, length 140,897.<br><br>### train_PMIDs.json & dev_PMIDs.json & test_PMIDs.json & human_PMIDs.json<br><br>PMIDs of articles in training / dev / test split.<br>List of string.<br><br>### train_patient_uids.json & dev_patient_uids.json & test_patient_uids.json & human_patient_uids.json<br><br>Patient_uids of notes in training / dev / test split.<br>List of string.<br><br>### patient2article_relevance.json<br><br>Full patient-to-article dataset.<br>A dict where the keys are `patient_uid` of queries and each entry is a list of `PMID`, representing articles relevant to the query.<br><br>The 3-point relevance can be obtained by checking whether the `PMID` is in `PMIDs.json`.<br><br>### patient2patient_similarity.json<br><br>Full patient-to-patient similarity dataset.<br>A dict where the keys are `patient_uid` of queries and each entry is a list of `patient_uid`, representing similar patients to the query.<br><br>The 3-point similarity can be obtained by checking whether the similar patient share the `PMID` (the string before '-' in `patient_uid`) with the query patient.<br><br><br>### PMID2Mesh.json<br><br>Dict of PMIDs to MeSH terms of the article.<br><br>### MeSH_Humans_patient_uids.json<br><br>`patient_uid` of the patients in PMC-Patients-Humans (extracted from articles with "Humans" MeSH term).<br>List of string.<br><br>### PMC-Patients_citations.json<br><br>Citations for all articles we used to collect our dataset.<br>A dict where the keys are `patient_uid` and each entry is the citation of the source article.<br><br>### human_PMIDs.json<br><br>PMIDs of the 500 randomly sampled articles for human evaluation.<br>List of string.<br><br>### PMC-Patients_human_eval.json<br><br>Expert annotation results of the 500 articles in `human_PMIDs.json`, including manually annotated patient note, demographics, and relations of the top 5 retrieved articles / patients.<br>List of dict, and the keys are almost identical to `PMC-Patients.json`, with the exception of `human_patient_id` and `human_patient_uid`.<br><br>The relational annotations are different from automatic ones. They are strings indicating on which dimension(s) are the patient-article / patient-patient pair relevant / similar. <br>"0", "1", "2", and "3" represent "Irrelevant", "Diagnosis", "Test", "Treatment" in ReCDS-PAR, and represent "Dissimilar", "Features", "Outcomes", "Exposure" in ReCDS-PPR.<br>Note that a pair can be relevant / similar on multiple dimensions at the same time.<br><br>### PAR_PMIDs.json<br><br>PMIDs of the 11.7M articles used as PAR corpus.<br>List of string.<br><br><br></pre>
DOI: 10.6084/m9.figshare.11662488.v1
title: metafeatures.json

description: A learning curve dataset on OpenML data providing many statistics such as loss, accuracy, configuration, global and loca gradient statistics.<br>
DOI: 10.6084/m9.figshare.5129311.v1
title: Supplementary Material for: False-Negative Cases on Confocal Microscopy Examination: A Retrospective Evaluation and Critical Reappraisal

description: <b><i>Background:</i></b> Confocal microscopy is a second-level examination for dermoscopically equivocal melanocytic lesions. However, the number of false-negative cases on confocal microscopy and the scenarios in which confocal microscopy may fail have not been fully elucidated. <b><i>Objective:</i></b> To calculate the percentage of false-negative melanomas upon reflectance confocal microscopy examination in a large series of cases. <b><i>Methods:</i></b> A retrospective analysis on 201 melanomas, evaluated for dermoscopic/confocal criteria of melanoma, was carried out. <b><i>Results:</i></b> Twenty-three melanomas out of 201 cases (11.4%) revealed a low 7-point checklist score. On confocal examination, 22 out of 23 lesions have been diagnosed correctly as melanomas. Only 1 lesion did not display melanoma features, neither upon dermoscopy nor upon confocal microscopy examination. Seven lesions out of 201 cases (3.5%) were judged as negative on confocal examination, even if 6 of them were diagnosed as melanomas by clinical and/or dermoscopic evaluation. After histopathological revision, these cases were grouped into 5 categories: (1) amelanotic melanoma (n = 1), (2) hyperkeratotic melanomas (n = 2), (3) lentiginous melanomas (n = 2), (4) melanoma with small pagetoid cells (n = 1), (5) spitzoid melanoma (n = 1). <b><i>Conclusion:</i></b> Confocal and dermoscopic examination, along with patient-related information and clinical history, can lead to an optimal patient management.