cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28510241
title: OmiDos

description: Integrating single-cell multi-omics data is crucial for understanding the complex regulatory mechanisms governing cellular functions. However, a significant challenge arises from the concurrent existence of shared mechanisms across diverse cellular states and condition-specific features, particularly within dynamic and heterogeneous microenvironments. Most existing integration approaches struggle to effectively distinguish between shared and modality-specific features, leading to misinterpretation of regulatory dynamics. Here, we introduce OmiDos, a novel dynamic orthogonal deep generative model, specifically designed to disentangle shared and unique molecular signatures across multi-omics layers in single-cell multi-omics data. Unlike prior methods that rely on simplistic assumptions about shared features, OmiDos leverages deep transfer learning to extract invariant shared signals from paired data while enforcing orthogonality constraints to separate modality-specific signals into distinct latent spaces. To address unpaired data, OmiDos incorporates an adversarial discriminator combined with noise contrastive estimation. Furthermore, OmiDos features a decoder layer enhanced by a maximum mean discrepancy regularization, enabling robust batch correction across diverse experimental conditions. We benchmark OmiDos against a wide range of multi-omics datasets, demonstrating superior accuracy and robustness in integrating complex, high-dimensional data. In a mouse secondary palate development dataset, OmiDos precisely identified a critical enhancer at the genomic locus chr16: 32697085-32697585, elucidating its essential role in regulating \emph{Muc4} expression. Its activity strongly correlates with the regulatory dynamics observed in E13.5 and E14.5 epithelial cell differentiation and migration. When applied to a medulloblastoma dataset, OmiDos revealed a dynamic regulatory transition, characterized by a shift from predominant reliance on distal regulatory elements during early developmental stages to a marked preference for proximal regulatory elements in advanced tumor stages.
DOI: 10.15468/dl.zyhkju
title: Occurrence Download

description: A dataset containing 16910 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "StateProvince is nuevo león",
 "TaxonKey is Quiscalus mexicanus (Gmelin, 1788)"
 ]
}

 The dataset includes 16910 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000366-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r7jw85
title: Occurrence Download

description: A dataset containing 174442 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aesculus hippocastanum L.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 174442 records from 1130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000357-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.thzvy8
title: Occurrence Download

description: A dataset containing 1714213 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Pl@ntNet observations"
 ]
}

 The dataset includes 1714213 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000360-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbvx64
title: Occurrence Download

description: A dataset containing 30168 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "PublishingOrg is e2e717bf-551a-4917-bdc9-4fa0f342c530",
 "TaxonKey is Myiarchus tyrannulus (Statius Muller, 1776)",
 "Year 2010-2025"
 ]
}

 The dataset includes 30168 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000363-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d432yy
title: Occurrence Download

description: A dataset containing 160020 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "PublishingOrg is e2e717bf-551a-4917-bdc9-4fa0f342c530",
 "TaxonKey is Tyrannus melancholicus Vieillot, 1819",
 "Year 2010-2025"
 ]
}

 The dataset includes 160020 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000362-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pvw8ph
title: Occurrence Download

description: A dataset containing 242406 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crinia signifera Girard, 1853"
 ]
}

 The dataset includes 242406 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000350-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5dwz23
title: Occurrence Download

description: A dataset containing 5494788 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "HasCoordinate is true",
 "Year is 2019",
 "Month is July"
 ]
}

 The dataset includes 5494788 records from 443 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000359-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.efk86w
title: Occurrence Download

description: A dataset containing 186274 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Canada, United States of America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Harmonia axyridis",
 "Year 1965-2025"
 ]
}

 The dataset includes 186274 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058642-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkp6nx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gaviiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-30 -90,0 -90,0 -60,-30 -60,-30 -90))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058702-250920141307145/datasets/export for details.
DOI: 10.21227/wrzs-4b48
title: Interpolated HRIRs for System Identification

description: We simulated time-varying head-related impulse responses (HRIRs) during continuous speaker array rotation using the FABIAN HRIR database, which provides high-resolution measurements for azimuth angles ranging from 0° to 360° and elevation angles from -90° to 90° in an anechoic chamber at a 44.1 kHz sampling rate. HRIRs at 0° head-above-torso orientation (HATO) were interpolated to 0.001° azimuth resolution using inverse distance weighting to simulate a 45°/s rotation. Interpolated HRIRs were included for 12 speakers spaced at 30° elevation intervals (–90° to 90°). A 180° rotation (covering 360° azimuth with the 12 speakers) was simulated to support deep learning-based HRIR identification and head-related transfer function (HRTF) individualization.
DOI: 10.5517/cc1jg099
title: CCDC 1413640: Experimental Crystal Structure Determination

description: Related Article: Eliar Mosaferi, Li Pan, Tongen Wang, Yunshan Sun, Conor Pranckevicius, Douglas W. Stephan|2016|Dalton Trans.|45|1354|doi:10.1039/C5DT04337A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1kbz1x
title: CCDC 1440509: Experimental Crystal Structure Determination

description: Related Article: Midori A. Arai, Yuuki Kofuji, Yuuki Tanaka, Natsuki Yanase, Kazuki Yamaku, Rolly G. Fuentes, Utpal Kumar Karmakar, Masami Ishibashi|2016|Org.Biomol.Chem.|14|3061|doi:10.1039/C5OB02537K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kbz2y
title: CCDC 1440510: Experimental Crystal Structure Determination

description: Related Article: Da Zhao, Zuowei Xie|2016|Angew.Chem.,Int.Ed.|55|3166|doi:10.1002/anie.201511251
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kbz3z
title: CCDC 1440511: Experimental Crystal Structure Determination

description: Related Article: Da Zhao, Zuowei Xie|2016|Angew.Chem.,Int.Ed.|55|3166|doi:10.1002/anie.201511251
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kbz40
title: CCDC 1440512: Experimental Crystal Structure Determination

description: Related Article: Da Zhao, Zuowei Xie|2016|Angew.Chem.,Int.Ed.|55|3166|doi:10.1002/anie.201511251
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kbz51
title: CCDC 1440513: Experimental Crystal Structure Determination

description: Related Article: Da Zhao, Zuowei Xie|2016|Angew.Chem.,Int.Ed.|55|3166|doi:10.1002/anie.201511251
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1kbz73
title: CCDC 1440515: Experimental Crystal Structure Determination

description: Related Article: Yujing Zhou, Fei Ye, Qi Zhou, Yan Zhang, and Jianbo Wang|2016|Org.Lett.|18|2024|doi:10.1021/acs.orglett.6b00631
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kbz62
title: CCDC 1440514: Experimental Crystal Structure Determination

description: Related Article: Da Zhao, Zuowei Xie|2016|Angew.Chem.,Int.Ed.|55|3166|doi:10.1002/anie.201511251
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kc1ml
title: CCDC 1440589: Experimental Crystal Structure Determination

description: Related Article: Bin Jiang, Chen Chen Du, Min Jie Li, Ke Gao, Li Kou, Ming Chen, Feng Liu, Thomas P. Russell, Hongyu Wang|2016|Polym.Chem.|7|3311|doi:10.1039/C6PY00346J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kc1nm
title: CCDC 1440590: Experimental Crystal Structure Determination

description: Related Article: Bin Jiang, Chen Chen Du, Min Jie Li, Ke Gao, Li Kou, Ming Chen, Feng Liu, Thomas P. Russell, Hongyu Wang|2016|Polym.Chem.|7|3311|doi:10.1039/C6PY00346J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kc1pn
title: CCDC 1440591: Experimental Crystal Structure Determination

description: Related Article: Bin Jiang, Chen Chen Du, Min Jie Li, Ke Gao, Li Kou, Ming Chen, Feng Liu, Thomas P. Russell, Hongyu Wang|2016|Polym.Chem.|7|3311|doi:10.1039/C6PY00346J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kbzc7
title: CCDC 1440519: Experimental Crystal Structure Determination

description: Related Article: Shruti Gupta, Pooja Saluja, Jitender M. Khurana|2016|Tetrahedron|72|3986|doi:10.1016/j.tet.2016.05.021
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kc1qp
title: CCDC 1440592: Experimental Crystal Structure Determination

description: Related Article: Bin Jiang, Chen Chen Du, Min Jie Li, Ke Gao, Li Kou, Ming Chen, Feng Liu, Thomas P. Russell, Hongyu Wang|2016|Polym.Chem.|7|3311|doi:10.1039/C6PY00346J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1k1b1z
title: CCDC 1431240: Experimental Crystal Structure Determination

description: Related Article: Kebballi N. Nandeesh, Hassan A. Swarup, Nagarakere C. Sandhya, Chakrabhavi D. Mohan, Chottanahalli S. Pavan Kumar, Manikyanahalli N. Kumara, Kempegowda Mantelingu, Sannaiah Ananda, Kanchugarakoppal S. Rangappa|2016|New J.Chem.|40|2823|doi:10.1039/C5NJ02925B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kbzd8
title: CCDC 1440520: Experimental Crystal Structure Determination

description: Related Article: Cheng-Feng Du, Jian-Rong Li, Nan-Nan Shen, Xiao-Ying Huang|2016|J.Solid State Chem.|238|203|doi:10.1016/j.jssc.2016.03.036
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kbzgb
title: CCDC 1440522: Experimental Crystal Structure Determination

description: Related Article: Liu-Zhu Yu, Yin Wei, Min Shi|2016|Chem.Commun.|52|13163|doi:10.1039/C6CC07394H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kbzhc
title: CCDC 1440523: Experimental Crystal Structure Determination

description: Related Article: Liu-Zhu Yu, Zi-Zhong Zhu, Xu-Bo Hu, Xiang-Ying Tang, Min Shi|2016|Chem.Commun.|52|6581|doi:10.1039/C6CC02496C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc12z9mz
title: CCDC 1012231: Experimental Crystal Structure Determination

description: Related Article: Yang Yang, Chunhe Li, Ya-Guang Chen|2016|J.Inclusion Phenom.Macrocyclic Chem.|84|203|doi:10.1007/s10847-016-0597-0
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1kc1sr
title: CCDC 1440594: Experimental Crystal Structure Determination

description: Related Article: Rafał Kowalczyk and Przemysław J. Boratyński|2016|Adv.Synth.Catal.|358|1289|doi:10.1002/adsc.201501138
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1kbzjd
title: CCDC 1440524: Experimental Crystal Structure Determination

description: Related Article: Mark D. Eddleston, Mihails Arhangelskis, Laszlo Fábián, Graham J. Tizzard, Simon J. Coles, and William Jones|2016|Cryst.Growth Des.|16|51|doi:10.1021/acs.cgd.5b00905
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1kbzkf
title: CCDC 1440525: Experimental Crystal Structure Determination

description: Related Article: Mark D. Eddleston, Mihails Arhangelskis, Laszlo Fábián, Graham J. Tizzard, Simon J. Coles, and William Jones|2016|Cryst.Growth Des.|16|51|doi:10.1021/acs.cgd.5b00905
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1kbzlg
title: CCDC 1440526: Experimental Crystal Structure Determination

description: Related Article: Mark D. Eddleston, Mihails Arhangelskis, Laszlo Fábián, Graham J. Tizzard, Simon J. Coles, and William Jones|2016|Cryst.Growth Des.|16|51|doi:10.1021/acs.cgd.5b00905
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1kbzmh
title: CCDC 1440527: Experimental Crystal Structure Determination

description: Related Article: Mark D. Eddleston, Mihails Arhangelskis, Laszlo Fábián, Graham J. Tizzard, Simon J. Coles, and William Jones|2016|Cryst.Growth Des.|16|51|doi:10.1021/acs.cgd.5b00905
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1kbznj
title: CCDC 1440528: Experimental Crystal Structure Determination

description: Related Article: Mark D. Eddleston, Mihails Arhangelskis, Laszlo Fábián, Graham J. Tizzard, Simon J. Coles, and William Jones|2016|Cryst.Growth Des.|16|51|doi:10.1021/acs.cgd.5b00905
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.58032/agh/ou5uoq
title: Determination of hydroxy derivatives of PAHs in sewage sludge by GC-MS/ MS - research data

description: Hydroxylated PAHs in Sewage Sludge (GC-MS/MS Study)