cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23624466
title: RNA-seq VST Scaled Values

description: VST scaled counts derived from frontal RNA-seq dataset of the RiMod-FTD data resource (https://www.rimod-ftd.org/). The data was processed in the following way: Raw FastQ files were processed using the RNA-seq pipeline from nf-core (nf-core/rnaseq v1.3), with trimming enabled. Gene quantification was subsequently done using Salmon (v0.14.1) on the trimmed FastQ files. Alignment and mapping were performed against the human genome hg38. On average, 82,165,192 reads could be uniquely mapped, which relates to on average 88.6% uniquely mapped reads per sample. In total, 59,270 transcripts could be identified. DESeq2 (v.1.26.0) was used to perform differential expression analysis. We corrected for the covariates gender and PH-value. For visualization and clustering, the data was transformed using the variance stabilization transformation from the DESeq2 package.
DOI: 10.5281/zenodo.8114762
title: Simulation dataset for: "The Leu/Val6.51 side chain of cannabinoid receptors regulates the binding mode of the alkyl chain of ∆9-tetrahydrocannabinol"

description: This dataset contains the prepared systems and the input parameters necessary to guarantee reproducibility of the molecular dynamics simulations of "The Leu/Val6.51 side chain of cannabinoid receptors regulates the binding mode of the alkyl chain of ∆9-tetrahydrocannabinol" work.
DOI: 10.5281/zenodo.8114761
title: Simulation dataset for: "The Leu/Val6.51 side chain of cannabinoid receptors regulates the binding mode of the alkyl chain of ∆9-tetrahydrocannabinol"

description: This dataset contains the prepared systems and the input parameters necessary to guarantee reproducibility of the molecular dynamics simulations of "The Leu/Val6.51 side chain of cannabinoid receptors regulates the binding mode of the alkyl chain of ∆9-tetrahydrocannabinol" work.
DOI: 10.5281/zenodo.8114855
title: SNSF project 192545 - Data and Codes

description: This contains data and code used to produce and visualize the results of the numerical experiments for the SNSF project 100013_192545.
DOI: 10.5281/zenodo.8114854
title: SNSF project 192545 - Data and Codes

description: This contains data and code used to produce and visualize the results of the numerical experiments for the SNSF project 100013_192545.
DOI: 10.6084/m9.figshare.14096915
title: intfinder_db

description: https://cge.food.dtu.dk/services/IntFinder-1.0/ IntFinder database expanded to detect integron classes 1, 2, and 3. <br> Tool: <br> Software: https://bitbucket.org/genomicepidemiology/intfinder/src/master/<br> <br> Database https://bitbucket.org/genomicepidemiology/intfinder_db/src/master/<br>
DOI: 10.25345/c5s17t35b
title: MassIVE MSV000092342 - Elucidating the molecular basis of thermotolerance in the Caribbean reef builder Orbicella faveolata
title: Thirty-five Orbicella faveolata (scleractinian coral) proteins were labeled with iTRAQ technology and analyzed across five runs ("batches") of nano-liquid chromatography followed by mass spectrometry on a Q Exactive instrument. The samples represent a mix of corals that either were or were not reciprocally transplanted across shelves (inshore vs. offshore) in the Upper Florida Keys prior to a laboratory thermal challenge (tank) experiment. The goal of this project was to determine the molecular basis of thermotolerance in this common reef-builder as well as attempt to understand why inshore genotypes are typically more stress-tolerant than closely related offshore conspecifics. Since there are only eight iTRAQ tags and 35 samples to be analyzed, five runs of the instrument were required. To accommodate batch-to-batch variation, which can be extensive, a normalizing sample representing a mix of all proteins analyzed was run with the 113 iTRAQ tag in each batch. Protein concentrations were first normalized to the concentration of the normalizing sample in the same batch. An additional batch correction factor was nevertheless needed and can be found in the appended sample description table. Otherwise, methods follow Mayfield and Lin (2023).
DOI: 10.6084/m9.figshare.21181069
title: A dataset of landscape and road features that drive wildlife mortality in the Amazon

description: Data for publication Medrano-Vizcaíno P., Grilo C., Brito-Zapata, D., and González-Suárez M. 2023. Landscape and road features linked to wildlife mortality in the Amazon. <br> We include ten .csv files with distances to landscape features, percentage of cover, and road sinuosity from roadkill and control sites for: all vertebrates, amphibians, amphibians without cane toad, cane toad, reptiles, birds, mammals, mammals without opossums, opossums, and amphisbaenians and caecilians. <br> For more details, read the readme.txt file. <br>
DOI: 10.20372/eiar-rdm/sipc9o/uehvft
title: Tomato data Tradecorp Z.tab

description: :unav
DOI: 10.20372/eiar-rdm/sipc9o
title: Evaluation of Tradecorp AZ Bentley plus Fertilizer for Tomato Crop Yield Improvement under Irrigation in East Shoa Zone of Oromia, Ethiopia

description: TadecorpZ new fertilizer testing result
DOI: 10.20372/eiar-rdm/hod1og
title: Mela fertilizer testing data

description: It is mela new fertilizer testing row data
DOI: 10.5517/ccdc.csd.cc2fhzqn
title: CCDC 2249692: Experimental Crystal Structure Determination

description: Related Article: cui guo|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.4436094
title: Deep Ocean storage of heat and CO2 in the Fram Strait, the Arctic Ocean during the last glacial period

description: Mg/Ca and B/Ca, δ18O, δ13C, Bottom Water Temperature (BWT), Seawater δ18O based on the benthic foraminiferal species <em>Oridorsalis umbonatus</em> from sediment core core HH12-946MC, the Fram Strait.
DOI: 10.6085/aa/sqp001_021mtbd000r00_20020528.50.1
title: PISCO: Physical Oceanography: moored temperature data: Soquel Point, California, USA (SQP001)

description: This metadata record describes moored seawater temperature data collected at Soquel Point, California, USA, by PISCO. Measurements were collected using StowAway Tidbit Temperature Loggers (Onset Computer Corp. TBI32-05+37) beginning 2002-05-28. The instrument depth was 000 meters, in an overall water depth of 021 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sqp001_021mtbd000r00_20020528.50.2
title: PISCO: Physical Oceanography: moored temperature data: Soquel Point, California, USA (SQP001)

description: This metadata record describes moored seawater temperature data collected at Soquel Point, California, USA, by PISCO. Measurements were collected using StowAway Tidbit Temperature Loggers (Onset Computer Corp. TBI32-05+37) beginning 2002-05-28. The instrument depth was 000 meters, in an overall water depth of 021 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sqp001_021mtbd000r00_20020528.50.3
title: PISCO: Physical Oceanography: moored temperature data: Soquel Point, California, USA (SQP001)

description: This metadata record describes moored seawater temperature data collected at Soquel Point, California, USA, by PISCO. Measurements were collected using StowAway Tidbit Temperature Loggers (Onset Computer Corp. TBI32-05+37) beginning 2002-05-28. The instrument depth was 000 meters, in an overall water depth of 021 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sqp001_021mtbd000r00_20020528.50.5
title: PISCO: Physical Oceanography: moored temperature data: Soquel Point, California, USA (SQP001)

description: This metadata record describes moored seawater temperature data collected at Soquel Point, California, USA, by PISCO. Measurements were collected using StowAway Tidbit Temperature Loggers (Onset Computer Corp. TBI32-05+37) beginning 2002-05-28. The instrument depth was 000 meters, in an overall water depth of 021 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sqp001_021mtbd000r00_20020806.40.1
title: (:unkn)
DOI: 10.6085/aa/sqp001_021mtbd000r00_20020806.40.2
title: (:unkn)
DOI: 10.6085/aa/sqp001_021mtbd000r00_20020806.50.2
title: PISCO: Physical Oceanography: moored temperature data: Soquel Point, California, USA (SQP001)

description: This metadata record describes moored seawater temperature data collected at Soquel Point, California, USA, by PISCO. Measurements were collected using StowAway Tidbit Temperature Loggers (Onset Computer Corp. TBI32-05+37) beginning 2002-08-06. The instrument depth was 000 meters, in an overall water depth of 021 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/sqp001_021mtbd000r00_20021121.50.3
title: PISCO: Physical Oceanography: moored temperature data: Soquel Point, California, USA (SQP001)

description: This metadata record describes moored seawater temperature data collected at Soquel Point, California, USA, by PISCO. Measurements were collected using StowAway Tidbit Temperature Loggers (Onset Computer Corp. TBI32-05+37) beginning 2002-11-21. The instrument depth was 000 meters, in an overall water depth of 021 meters (both relative to Mean Sea Level, MSL). The sampling interval was -14.2 minutes.
DOI: 10.6085/aa/sqp001_021mtbd000r00_20030105.50.4
title: PISCO: Physical Oceanography: moored temperature data: Soquel Point, California, USA (SQP001)

description: This metadata record describes moored seawater temperature data collected at Soquel Point, California, USA, by PISCO. Measurements were collected using StowAway Tidbit Temperature Loggers (Onset Computer Corp. TBI32-05+37) beginning 2003-01-05. The instrument depth was 000 meters, in an overall water depth of 021 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.5063/aa/tfriim.12.1
title: (:unkn)
DOI: 10.5063/aa/tfriim.3.1
title: Fire severity research of 2002 Wulin Fire in Taiwan data created by fire lab of Taiwan Forestry Research Institute

description: The objects of this study are to develop a methodology of evaluate fire severity by using satallite image, and to transfer this technique to practical uses for fire managers. The study design was to set up 20 postfire sampling plots. Each plot has 20*20 m in area. A team entered the fire site a week after fire. There are items of data will collected including understory and canopy lay. Then, satallite images of fire site were collected from National Central Univ Remote Sensing Center.
DOI: 10.5063/aa/tfriim.6.3
title: Taiwan Fushan Climate

description: Climatic data monitoring with five automaic weather stations at the Fushan Experimental Forest are compiled. Five stations are: 1) Fushan Nursery Station (Nursery), 2) Fushan Watershed No.1 South Tower (WS-1 Tower), 3) Fushan Watershed No.1 North Tower (WS-1 N Tower), 4) Fushan Garden Station (Garden), 5) Harpen Reserve Station (Harpen). At all stations, Campbell datalogger (CR-10, CR10X, and CR7) are employed. Instruments are mounted on instrument towers with height of 10, 6, 20, 32, and 10 meters for Nursery, Garden, WS-1 S Tower, WS-1 N Tower, and Harpen, respectifully. The Nursery Station has been established since 1992 and is maintained as a base station for the long term climatic record for the Fushan LTER site. Garden station was established in July, 1997 for the purpose of providing local environmental conditions within the Harpen vally especially for heavy frost condition occurs occassionally in the winter months. Two tower stations located at the south and north ridge of the Fushan Experimental Watershed were mounted on top of instrument towers to provide climatic conditions above the forest canopy. Hapen station was established in 2002 and is located near the northern border of the Harpen Nature Reserve area. Occassionally, those two instrument towers were damaged by gusty wind came with typhoon and climatic data are spotted with periods of missing data, Care must be paid in interpreting long term statistical values of those stations.
DOI: 10.5063/aa/tonelow13.1010.1
title: (:unkn)
DOI: 10.5063/aa/tonelow13.1024.4
title: (:unkn)
DOI: 10.5063/aa/tonelow13.1024.6
title: (:unkn)
DOI: 10.5063/aa/tonelow13.1041.1
title: (:unkn)
DOI: 10.5063/aa/tonelow13.1042.1
title: (:unkn)
DOI: 10.5063/aa/umatilla.27.1
title: (:unkn)
DOI: 10.5063/aa/umatilla.28.1
title: (:unkn)
DOI: 10.5063/aa/umatilla.29.1
title: (:unkn)
DOI: 10.5063/aa/umatilla.30.1
title: (:unkn)
DOI: 10.5063/aa/vicbignet.3.1
title: Fish/Invertebrate community data, Sabah, Malaysia 2011

description: The study was carried out over a three-month period in Sabah, Malaysian Borneo from September to December 2011. This particular spreadsheet constitutes the baseline dataset for a long-term study, which aims to monitor the changes in composition and state of the aquatic communities within the SAFE Project's experimental area in the Kalabakan Forest Reserve. As the forest area is being cleared and converted to oil palm monocultures, the effectiveness of buffer zones of a range of thicknesses is being tested in terms of their respective capacities in buffering sources of riparian pollution including fertilizer/pesticide runoff or soil erosion. Fieldwork was operated in each stream over a 200 m transect starting at and going upstream from each stream's respective data logger. Sampling was conducted every 10 m along this transect. Aquatic invertebrate sampling was carried out using 20 submerged bottle traps, preferably squeezed between rocks. Fish sampling was mediated by a cast-net, thrown 10 times across the 200 m transect. Individuals were identified to species level and species-specific abundance was recorded. In total, sampling was repeated six times for each river.
DOI: 10.5063/aa/wallace.4.1
title: Bacterial Genomes from soil in Mixed Grass Prairie at Kessler Farm Field Laboratory, Oklahoma

description: Soil samples were obtained in November, 2005 from six sites at Kessler Farm Field Laboratory. Genomic information from those samples is included in this package.
DOI: 10.5063/aa/wetlandsofindia.26.1
title: (:unkn)
DOI: 10.5063/aa/wetlandsofindia.28.1
title: (:unkn)
DOI: 10.5063/aa/wetlandsofindia.29.1
title: (:unkn)
DOI: 10.5063/aa/wetlandsofindia.36.1
title: (:unkn)
DOI: 10.5063/aa/wetlandsofindia.4.2
title: (:unkn)
DOI: 10.5063/aa/wetlandsofindia.45.1
title: (:unkn)
DOI: 10.5063/aa/wetlandsofindia.6.1
title: (:unkn)
DOI: 10.5063/aa/will.3.1
title: Southern California Bight Vulcanic and Metamorphic Rocks

description: This dataset represents the state of knowledge about the distribution of volcanic and metamorphic rocks along the Southern California continental shelf as of 1974. The data are derived from a single, paper map. The purpose of this project was to create digital, GIS format versions of the California continetnal shelf seafloor substrate using existing hard copy (paper) maps from a variety of sources. Created using map from US Department of Interior, Bureau of Land Management, Pacific Outer Continental Shelf Office, 1974. The map illustrates 8 substrate types which we distilled into three: Sedimentary Rocks, Undifferentiated Rocks, and Vulcanic Metamorphic Rocks. Original 8 substypes were: Pre-upper Cretaceous sedimentary igneous & metamorphic rocks; Eocene & Paleocene sedimentary rocks; Miocene vulcanic rocks; Oligocene sedimentary rocks (non-marine); Miocene intrusive igneous rocks & pre-upper cretaceous igneous; sedimentary and metamorphic rocks (undifferentiated); Miocene igneous & sedimentary rocks (undifferentiated); Holocene Pleistocene & Plicene sediments and sedimentary rocks; and Miocene sedimentary rocks.
DOI: 10.5063/aa/will.6.1
title: Southern California Bight Undifferentiated Rock

description: This dataset represents the state of knowledge about the distribution of undifferentiated rocks along the Southern California continental shelf as of 1974. The data are derived from a single, paper map. The purpose of this project was to create digital, GIS format versions of the California continetnal shelf seafloor substrate using existing hard copy (paper) maps from a variety of sources. Created using map from US Department of Interior, Bureau of Land Management, Pacific Outer Continental Shelf Office, 1974. The map illustrates 8 substrate types which we distilled into three: Sedimentary Rocks, Undifferentiated Rocks, and Vulcanic Metamorphic Rocks. Original 8 substypes were: Pre-upper Cretaceous sedimentary igneous & metamorphic rocks; Eocene & Paleocene sedimentary rocks; Miocene vulcanic rocks; Oligocene sedimentary rocks (non-marine); Miocene intrusive igneous rocks & pre-upper cretaceous igneous; sedimentary and metamorphic rocks (undifferentiated); Miocene igneous & sedimentary rocks (undifferentiated); Holocene Pleistocene & Plicene sediments and sedimentary rocks; and Miocene sedimentary rocks. Data digitized from Channel Islands Area Map created by the US Department of the Interior Beurea of Land Management, Pacific Continental Shelf Office, 1974. UCSB library call number: 9507, .N2446, 1974, .U5, graphic #11. Source data from the map were prepared by the U.S. Geological Survey, 1974 (Geologic Division).
DOI: 10.5063/aa/will.9.1
title: Southern California Outer Continental Shelf Rocky Substrate

description: This dataset represents the state of knowledge about the distribution of rocky substrate for the Southern California continental shelf. The dataset is derived from a map series of seven adjacent but descrete maps illustrating seafloor sediment and rock. The purpose of this project was to create digital, GIS format versions of the Southern California continental shelf seafloor substrate maps originally produced by PS Associates of Cardiff, California for the Minerals Management Service in Reston, Verginia. The original data was presented in hard copy format and depicted areas of "rock outcrop, hard-ground, or less than 1 meter of sediment overlaying." Areas identified as "rock" on the hard copy map were designated as "rock" in this dataset. In areas where no rock was identified, we designated this as "sediment". Note that this is liberal interpretation of the original map data. A more conservative and accurate interpretation involved using "no data" maps which indicated the areas in which no information on substrate type was gathered. Please see the "no_data" dataset that is part of this series. Original map title: Isopach map of the post-Wisconsin sediment thickness data sources. California Outer Continental Shelf Archeaological Resource Study from Morro Bay to the Mexican Border. Prepared by P.S. Associates, Contract number 14-12-0001-30272, May 1, 1987. Map scale was 1:125,000. Used maps 1A, 2A, 3A, 4A, 5A.
DOI: 10.5063/aa/wliao.103.2
title: 測試
DOI: 10.5063/aa/wolkovich.13.1
title: (:unkn)
DOI: 10.5063/aa/wolkovich.19.1
title: (:unkn)
DOI: 10.6085/aa/joe001_023mtbd022r00_20060126.50.4
title: PISCO: Physical Oceanography: moored temperature data: Point Joe, California, USA (JOE001)

description: This metadata record describes moored seawater temperature data collected at Point Joe, California, USA, by PISCO. Measurements were collected using a StowAway Tidbit Temperature Logger (Onset Computer Corp. TBIC32+4+27) beginning 2006-01-26. The instrument depth was 022 meters, in an overall water depth of 23 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/joe001_023mtbd022r00_20060308.50.2
title: PISCO: Physical Oceanography: moored temperature data: Point Joe, California, USA (JOE001)

description: This metadata record describes moored seawater temperature data collected at Point Joe, California, USA, by PISCO. Measurements were collected using a StowAway Tidbit Temperature Logger (Onset Computer Corp. TBIC32+4+27) beginning 2006-03-08. The instrument depth was 022 meters, in an overall water depth of 23 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/joe001_023mtbd022r00_20060308.50.7
title: MBNMS/PISCO: Physical Oceanography: moored temperature data: Point Joe, California, USA (JOE001)

description: This metadata record describes moored seawater temperature data collected at Point Joe, California, USA, by PISCO. Measurements were collected using a StowAway Tidbit Temperature Logger (Onset Computer Corp. TBIC32+4+27) beginning 2006-03-08. The instrument depth was 022 meters, in an overall water depth of 23 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/joe001_023mtbd022r00_20060308.50.8
title: MBNMS/PISCO: Physical Oceanography: moored temperature data: Point Joe, California, USA (JOE001)

description: This metadata record describes moored seawater temperature data collected at Point Joe, California, USA, by PISCO. Measurements were collected using a StowAway Tidbit Temperature Logger (Onset Computer Corp. TBIC32+4+27) beginning 2006-03-08. The instrument depth was 022 meters, in an overall water depth of 23 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/joe001_023mtbd022r00_20060422.40.2
title: (:unkn)
DOI: 10.6085/aa/joe001_023mtbd022r00_20060422.50.3
title: PISCO: Physical Oceanography: moored temperature data: Point Joe, California, USA (JOE001)

description: This metadata record describes moored seawater temperature data collected at Point Joe, California, USA, by PISCO. Measurements were collected using a StowAway Tidbit Temperature Logger (Onset Computer Corp. TBIC32+4+27) beginning 2006-04-22. The instrument depth was 022 meters, in an overall water depth of 23 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/joe001_023mtbd022r00_20060422.50.7
title: MBNMS/PISCO: Physical Oceanography: moored temperature data: Point Joe, California, USA (JOE001)

description: This metadata record describes moored seawater temperature data collected at Point Joe, California, USA, by PISCO. Measurements were collected using a StowAway Tidbit Temperature Logger (Onset Computer Corp. TBIC32+4+27) beginning 2006-04-22. The instrument depth was 022 meters, in an overall water depth of 23 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/joe001_023mtbd022r00_20060602.40.2
title: (:unkn)
DOI: 10.6085/aa/joe001_023mtbd022r00_20060602.50.1
title: PISCO: Physical Oceanography: moored temperature data: Point Joe, California, USA (JOE001)

description: This metadata record describes moored seawater temperature data collected at Point Joe, California, USA, by PISCO. Measurements were collected using a StowAway Tidbit Temperature Logger (Onset Computer Corp. TBIC32+4+27) beginning 2006-06-02. The instrument depth was 022 meters, in an overall water depth of 23 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.
DOI: 10.6085/aa/joe001_023mtbd022r00_20060602.50.10
title: MBNMS/PISCO: Physical Oceanography: moored temperature data: Point Joe, California, USA (JOE001)

description: This metadata record describes moored seawater temperature data collected at Point Joe, California, USA, by PISCO. Measurements were collected using a StowAway Tidbit Temperature Logger (Onset Computer Corp. TBIC32+4+27) beginning 2006-06-02. The instrument depth was 022 meters, in an overall water depth of 23 meters (both relative to Mean Sea Level, MSL). The sampling interval was 2.0 minutes.