cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6974546.v1
title: Impact of Glucose Measuring Systems and Sample Type on Diagnosis Rates of Diabetes Mellitus

description: <strong>Article full text</strong><br> <br> The article associated with this content has been accepted for online publication and is in the final stages of production. The link to the full text will be made available on this page in the next few days. <br> <br> <strong>Provide enhanced digital features for this article</strong><br> If you are an author of this publication and would like to provide additional enhanced digital features for your article then please contact adisrapidplus@springer.com.<br> <br> The journal offers a range of additional features designed to increase visibility and readership. All features will be thoroughly peer reviewed to ensure the content is of the highest scientific standard and all features are marked as ‘peer reviewed’ to ensure readers are aware that the content has been reviewed to the same level as the articles they are being presented alongside. Moreover, all sponsorship and disclosure information is included to provide complete transparency and adherence to good publication practices. This ensures that however the content is reached the reader has a full understanding of its origin. No fees are charged for hosting additional open access content.<br> <br> Other enhanced features include, but are not limited to:<br> • Slide decks<br> • Videos and animations<br> • Audio abstracts<br> • Audio slides
DOI: 10.6084/m9.figshare.6974417
title: Sorghum version 3, maize versions 3 and 4 syntenic gene list

description: This pan-grass synteny list was generated using the methodology described in: <br>Zhang Y, Ngu DW, Carvalho D, Liang Z, Qiu Y, Roston RL, Schnable JC. (2017) “Differentially regulated orthologs in sorghum and the subgenomes of maize.” The Plant Cell doi: 10.1105/tpc.17.00354 bioRxiv preprint doi: 10.1101/120303<br>Here the species analyzed are sorghum (BTx623 version 3), maize (both B73_refgen3 and B73_refgen4, treated as separate species for the purpose of this analysis), Setaria viridis (v1), Setaria italica (Yugu1 v2.2), Oropetium (v1), Brachypodium distachyon, and rice (MSU v7). <br>Both maize v3 and maize v4 were split into subgenomes using the definitions first published in:<br>Schnable JC, Springer NM, Freeling M. (2011) “Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss.” PNAS doi: 10.1073/pnas.1101368108<br>
DOI: 10.6084/m9.figshare.6974414
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 Revision of the UN World Population Prospects.<br>Content:<br>1. <b><i>codebook.pdf </i></b>contains a brief overview of the dataset, its background and a description of the cases and variables.<br>2. <i><b>methods.pdf</b> </i>is a (draft but complete) write up of the calculations used to create the dataset.<br>3.<b><i> 2017_prospective-ages.csv</i></b> is the human readable form of the prospective age dataset containing the calculated prospective old-age thresholds for 241 countries and regions, for the period 1950-2100, for men, women and both together, as well as the proportions of the population (male, female and total) over these thresholds.<br>This figshare fileset is published directly from the github repository ProspectiveAgeData. <br>For an application of this data see the factsheet on ageing in the Middle East and Northern Africa which will be published in Population Horizons journal.
DOI: 10.6084/m9.figshare.6974378
title: Dataset for: A novel chitin binding mode of the chitin binding domain of chitinase A1 from Bacillus circulans WL-12 revealed by solid-state NMR

description: Chitin-binding domain of chitinase A1 (ChBDChiA1) is characteristic because it binds only to insoluble crystalline chitin. While binding sites of major carbohydrate-binding modules carry multiple aromatic rings aligned on a surface, lethal mutations for ChBDChiA1 were reported only at W687, a location completely different from the site mentioned above, in spite of their similar main chain folds. Here, the structural mechanism underlying its crystalline chitin-binding was uncovered by solid-state NMR. Based on 13C- and 15N-signal assignment of microcrystalline ChBDChiA1, the chemical shift perturbation on chitin-binding was carefully examined. The perturbation was greatest at W687 and non-aromatic residues surrounding it, revealing their direct involvement in chitin-binding. These residues and Q679 should provide a novel chitin-binding platform parallel to the W687 ring.
DOI: 10.6084/m9.figshare.6974378.v1
title: Dataset for: A novel chitin binding mode of the chitin binding domain of chitinase A1 from Bacillus circulans WL-12 revealed by solid-state NMR

description: Chitin-binding domain of chitinase A1 (ChBDChiA1) is characteristic because it binds only to insoluble crystalline chitin. While binding sites of major carbohydrate-binding modules carry multiple aromatic rings aligned on a surface, lethal mutations for ChBDChiA1 were reported only at W687, a location completely different from the site mentioned above, in spite of their similar main chain folds. Here, the structural mechanism underlying its crystalline chitin-binding was uncovered by solid-state NMR. Based on 13C- and 15N-signal assignment of microcrystalline ChBDChiA1, the chemical shift perturbation on chitin-binding was carefully examined. The perturbation was greatest at W687 and non-aromatic residues surrounding it, revealing their direct involvement in chitin-binding. These residues and Q679 should provide a novel chitin-binding platform parallel to the W687 ring.
DOI: 10.6084/m9.figshare.6974363
title: De Nijs 2018 - Animal redundancy in phosphorus circularity

description: This excel file displays the phosphorus flow through the European Union 27 member states in 2005 using 96 subflows based on a flow system by Van Dijk et al. (2015; see References) that includes five sectors: crop production, animal production, food processing, non-food production and human consumption.
DOI: 10.6084/m9.figshare.6974414.v1
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974414.v2
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974363.v1
title: Test21081993

description: Phosphorus
DOI: 10.6084/m9.figshare.6974363.v2
title: De Nijs 2018 - Animal redundancy in phosphorus circularity

description: This excel file displays the phosphorus flow through the European Union 27 member states in 2005 using 96 subflows based on a flow system by Van Dijk et al. (2015; see References) that includes five sectors: crop production, animal production, food processing, non-food production and human consumption.
DOI: 10.6084/m9.figshare.6974414.v3
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974333
title: <i>Igdabatis marmii</i> sp. nov. (Myliobatiformes) from the lower Maastrichtian (Upper Cretaceous) of north-eastern Spain: an Ibero-Armorican origin for a Gondwanan batoid

description: Microvertebrate fossil assemblages (chondrichthyans, osteichthyans, lissamphibians and squamates) from the Campanian and Maastrichtian of south-western Europe include taxa with very different palaeobiogeographical affinities. However, most of these biogeographical histories remain unclear. As inhabitants of shallow marine waters, batoids are considered good palaeobiogeographical indicators that could reveal connections between continental platforms. <i>Igdabatis</i> is a stingray (Myliobatiformes) with an abundant Gondwanan fossil record, whereas its occurrence in the Ibero-Armorican landmass is intriguing. In this paper, a new species of <i>Igdabatis</i> – <i>Igdabatis marmii</i> sp. nov. – is reported from the lower Maastrichtian of Spain. Based on this new record, the phylogenetic relationships of Myliobatiformes are assessed, including <i>Igdabatis</i> taxa for first time. In addition, three new morphological characters are proposed based on the diagnoses of the different species and added to the dataset. The palaeobiogeographical events that these stingrays underwent during their speciation were explored through a Statistical Dispersal-Vicariance Analysis (S-DIVA) performed in RASP 2.1. The phylogenetic analysis suggests a highly nested position within Myliobatidae for the genus <i>Igdabatis</i>; and the new species was recovered as the most basal taxon in the clade. The S-DIVA results point to an Ibero-Armorican ancestral area for <i>Igdabatis</i>, from where its species diverged by a combination of vicariant and dispersal events. Both phylogenetic and palaeobiogeographical analyses were congruent with occurrences in the fossil record. Results and fossil evidence allow the proposal of a dispersal route between European and Gondwanan landmasses for these stingrays. The dispersal of <i>Igdabatis</i> between Ibero-Armorica and India during the Late Cretaceous was promoted by the proximity of the European and African continental platforms and then by the Kohistan-Ladakh island arc. http://zoobank.org/urn:lsid:zoobank.org:pub:F5C51029-2E26-48C6-8A87-A2D4310887EF
DOI: 10.6084/m9.figshare.6974414.v4
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974333.v1
title: <i>Igdabatis marmii</i> sp. nov. (Myliobatiformes) from the lower Maastrichtian (Upper Cretaceous) of north-eastern Spain: an Ibero-Armorican origin for a Gondwanan batoid

description: Microvertebrate fossil assemblages (chondrichthyans, osteichthyans, lissamphibians and squamates) from the Campanian and Maastrichtian of south-western Europe include taxa with very different palaeobiogeographical affinities. However, most of these biogeographical histories remain unclear. As inhabitants of shallow marine waters, batoids are considered good palaeobiogeographical indicators that could reveal connections between continental platforms. <i>Igdabatis</i> is a stingray (Myliobatiformes) with an abundant Gondwanan fossil record, whereas its occurrence in the Ibero-Armorican landmass is intriguing. In this paper, a new species of <i>Igdabatis</i> – <i>Igdabatis marmii</i> sp. nov. – is reported from the lower Maastrichtian of Spain. Based on this new record, the phylogenetic relationships of Myliobatiformes are assessed, including <i>Igdabatis</i> taxa for first time. In addition, three new morphological characters are proposed based on the diagnoses of the different species and added to the dataset. The palaeobiogeographical events that these stingrays underwent during their speciation were explored through a Statistical Dispersal-Vicariance Analysis (S-DIVA) performed in RASP 2.1. The phylogenetic analysis suggests a highly nested position within Myliobatidae for the genus <i>Igdabatis</i>; and the new species was recovered as the most basal taxon in the clade. The S-DIVA results point to an Ibero-Armorican ancestral area for <i>Igdabatis</i>, from where its species diverged by a combination of vicariant and dispersal events. Both phylogenetic and palaeobiogeographical analyses were congruent with occurrences in the fossil record. Results and fossil evidence allow the proposal of a dispersal route between European and Gondwanan landmasses for these stingrays. The dispersal of <i>Igdabatis</i> between Ibero-Armorica and India during the Late Cretaceous was promoted by the proximity of the European and African continental platforms and then by the Kohistan-Ladakh island arc. http://zoobank.org/urn:lsid:zoobank.org:pub:F5C51029-2E26-48C6-8A87-A2D4310887EF
DOI: 10.6084/m9.figshare.6974414.v5
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974414.v6
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974414.v7
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974414.v8
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974321.v2
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: Youtube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-onlinerepository.xlsx
DOI: 10.6084/m9.figshare.6974414.v9
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974321.v3
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: Youtube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-onlinerepository.xlsx
DOI: 10.6084/m9.figshare.6974321.v4
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: Youtube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-onlinerepository.xlsx
DOI: 10.6084/m9.figshare.6974414.v10
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974321.v5
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: Youtube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-onlinerepository.xlsx
DOI: 10.6084/m9.figshare.6974414.v11
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974414.v12
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974414.v13
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974321.v7
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: Youtube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-onlinerepository.xlsx
DOI: 10.6084/m9.figshare.6974414.v14
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974321.v8
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: Youtube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-onlinerepository.xlsx
DOI: 10.6084/m9.figshare.6974414.v15
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 WPP
DOI: 10.6084/m9.figshare.6974321.v9
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: Youtube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-onlinerepository.xlsx
DOI: 10.6084/m9.figshare.6974414.v16
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 Revision of the UN World Population Prospects.<br>Content:<br>1. <b><i>codebook.pdf </i></b>contains a brief overview of the dataset, its background and a description of the cases and variables.<br>2. <i><b>methods.pdf</b> </i>is a (draft but complete) write up of the calculations used to create the dataset.<br>3.<b><i> 2017_prospective-ages.csv</i></b> is the human readable form of the prospective age dataset containing the calculated prospective old-age thresholds for 241 countries and regions, for the period 1950-2100, for men, women and both together, as well as the proportions of the population (male, female and total) over these thresholds.<br>This figshare fileset is published directly from the github repository ProspectiveAgeData. <br>For an application of this data see the factsheet on ageing in the Middle East and Northern Africa which will be published in Population Horizons journal.
DOI: 10.6084/m9.figshare.6974414.v17
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 Revision of the UN World Population Prospects.<br>Content:<br>1. <b><i>codebook.pdf </i></b>contains a brief overview of the dataset, its background and a description of the cases and variables.<br>2. <i><b>methods.pdf</b> </i>is a (draft but complete) write up of the calculations used to create the dataset.<br>3.<b><i> 2017_prospective-ages.csv</i></b> is the human readable form of the prospective age dataset containing the calculated prospective old-age thresholds for 241 countries and regions, for the period 1950-2100, for men, women and both together, as well as the proportions of the population (male, female and total) over these thresholds.<br>This figshare fileset is published directly from the github repository ProspectiveAgeData. <br>For an application of this data see the factsheet on ageing in the Middle East and Northern Africa which will be published in Population Horizons journal.
DOI: 10.6084/m9.figshare.6974321
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: YouTube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-details-onlinerepository.xlsx<br>A few videos could not be uploaded to figshare, please see excel file for the source to download yourself or request complete set in a zip file (also could not upload the zip file to figshare).
DOI: 10.6084/m9.figshare.6974414.v18
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 Revision of the UN World Population Prospects.<br>Content:<br>1. <b><i>codebook.pdf </i></b>contains a brief overview of the dataset, its background and a description of the cases and variables.<br>2. <i><b>methods.pdf</b> </i>is a (draft but complete) write up of the calculations used to create the dataset.<br>3.<b><i> 2017_prospective-ages.csv</i></b> is the human readable form of the prospective age dataset containing the calculated prospective old-age thresholds for 241 countries and regions, for the period 1950-2100, for men, women and both together, as well as the proportions of the population (male, female and total) over these thresholds.<br>This figshare fileset is published directly from the github repository ProspectiveAgeData. <br>For an application of this data see the factsheet on ageing in the Middle East and Northern Africa which will be published in Population Horizons journal.
DOI: 10.6084/m9.figshare.6974321.v12
title: Evacuation Videos Database

description: Emergency evacuations. 126 publicly available videos in which people are or should be evacuating. Sources: Youtube & news sites. <br>See detailed information about the videos and data collection method in the excel file: vanderWal2020-onlinerepository.xlsx
DOI: 10.6084/m9.figshare.6974414.v19
title: Prospective Age Dataset

description: Computed prospective ages for 1950-2100 for all countries and regions based on 2017 Revision of the UN World Population Prospects.<br>Content:<br>1. <b><i>codebook.pdf </i></b>contains a brief overview of the dataset, its background and a description of the cases and variables.<br>2. <i><b>methods.pdf</b> </i>is a (draft but complete) write up of the calculations used to create the dataset.<br>3.<b><i> 2017_prospective-ages.csv</i></b> is the human readable form of the prospective age dataset containing the calculated prospective old-age thresholds for 241 countries and regions, for the period 1950-2100, for men, women and both together, as well as the proportions of the population (male, female and total) over these thresholds.<br>This figshare fileset is published directly from the github repository ProspectiveAgeData. <br>For an application of this data see the factsheet on ageing in the Middle East and Northern Africa which will be published in Population Horizons journal.
DOI: 10.6084/m9.figshare.6974312
title: Epigenetic alterations associated with early prenatal dexamethasone treatment: Supplementary Figure 1 & 2

description: Supplementary Table 1: Location of differentially methylated CpG sites. Probe locations in relation to the nearest gene or genes (left), as well as their location in relation to the nearest CpG island (right). Frequencies are shown for three levels of analysis; probes where puncorrected &lt;0.01 (A and D), probes with and puncorrected &lt;0.01 and a group difference in methylation of 5% (B and E), probes with puncorrected &lt;0.01 and a group difference in methylation of 10% (C and F).<br><br>Supplementary Table 2: Supplementary Figure 2. Enrichment results from the GAT analysis. Enrichment results of DMPs with SNPs from the GAT analysis over four genomic bins (1, 2, 5 and 10-kb) for DEX-associated DMPs (A) and DEX x sex-associated DMPs (B). Abbreviations: IBD, inflammatory bowel disease; MDD, major depressive disorder; ARMD, age-related macular degeneration; MPV, mean platelet volume; ISB, iron status biomarkers.<br><br>
DOI: 10.6084/m9.figshare.6974312.v1
title: Epigenetic alterations associated with early prenatal dexamethasone treatment: Supplementary Figure 1 & 2

description: Supplementary Table 1: Location of differentially methylated CpG sites. Probe locations in relation to the nearest gene or genes (left), as well as their location in relation to the nearest CpG island (right). Frequencies are shown for three levels of analysis; probes where puncorrected &lt;0.01 (A and D), probes with and puncorrected &lt;0.01 and a group difference in methylation of 5% (B and E), probes with puncorrected &lt;0.01 and a group difference in methylation of 10% (C and F).<br><br>Supplementary Table 2: Supplementary Figure 2. Enrichment results from the GAT analysis. Enrichment results of DMPs with SNPs from the GAT analysis over four genomic bins (1, 2, 5 and 10-kb) for DEX-associated DMPs (A) and DEX x sex-associated DMPs (B). Abbreviations: IBD, inflammatory bowel disease; MDD, major depressive disorder; ARMD, age-related macular degeneration; MPV, mean platelet volume; ISB, iron status biomarkers.<br><br>