cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.sqq0ct
title: Occurrence Download

description: A dataset containing 422480 species occurrences available in GBIF matching the query:
{
 "or" : [
 "StateProvince is meta [mehta]",
 "StateProvince is meta",
 "StateProvince is meta dept.",
 "StateProvince is meta | vaupés",
 "StateProvince is arauca",
 "StateProvince is arauca | meta",
 "StateProvince is casanare",
 "StateProvince is vichada",
 "StateProvince is guainia",
 "StateProvince is guainia | guaviare | vaupés",
 "StateProvince is guainia/vichada",
 "StateProvince is guainía",
 "StateProvince is guainã­a",
 "StateProvince is guain�a",
 "StateProvince is guaviare",
 "StateProvince is guaviare dept.",
 "StateProvince is guaviare*",
 "StateProvince is casanare department",
 "StateProvince is vaupes",
 "StateProvince is vaupes comm.",
 "StateProvince is vaups",
 "StateProvince is vaupã©s",
 "StateProvince is vaupés",
 "StateProvince is vaupés dept."
 ]
}

 The dataset includes 422480 records from 402 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013166-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xx6vy3
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is China",
 "Country is Chinese Taipei"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sinosuthora zappeyi (Thayer & Bangs, 1912)"
 ]
}

 The dataset includes 103 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0140275-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a0ncrw
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pycnonotus barbatus spurius"
 ]
}

 The dataset includes 23 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013166-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.akt4ur
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hugonia rufopilis A.Chev. ex Hutch. & Dalziel"
 ]
}

 The dataset includes 17 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026841-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uwt8bj
title: Occurrence Download

description: A dataset containing 327 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vincetoxicum sieboldii Franch. & Sav."
 ]
}

 The dataset includes 327 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0135753-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txews2
title: Occurrence Download

description: A dataset containing 1534 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Boechera stricta (Graham) Al-Shehbaz",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1534 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0143396-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kzy8km
title: Occurrence Download

description: A dataset containing 66250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-102.052 36.989,-94.601 36.989,-94.601 40.003,-102.052 40.003,-102.052 36.989))",
 {
 "or" : [
 "DatasetKey is NSW BioNet Atlas",
 "DatasetKey is Great Backyard Bird Count"
 ]
 }
 ]
}

 The dataset includes 66250 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013166-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nu4p45
title: Occurrence Download

description: A dataset containing 596 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium schlyteri (Lindeb. ex Dahlst.) Johanss."
 ]
}

 The dataset includes 596 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026887-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w5c9t9
title: Occurrence Download

description: A dataset containing 943869 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Repatriated is TRUE",
 "Country is Norway"
 ]
}

 The dataset includes 943869 records from 1056 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0145687-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xuwgu6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pholiurus pannonicus (Host) Trin.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0135754-240321170329656/datasets/export for details.
DOI: 10.15468/dl.3rebxa
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium scabrisetum (Zahn) Roffey"
 ]
}

 The dataset includes 103 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026797-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m345ss
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.13_1",
 "TaxonKey is Bison bison athabascae Rhoads, 1898"
 ]
}

 The dataset includes 16 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0143414-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8e95n7
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Homalium rakotovaoi Appleq."
 ]
}

 The dataset includes 34 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026800-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.23177645
title: .xlsx

description: the Behavioral data before and after cognitive-motor dual task
DOI: 10.6084/m9.figshare.23590380.v1
title: Additional file 1 of Transcriptional programs are activated and microRNAs are repressed within minutes after mating in the Drosophila melanogaster female reproductive tract

description: Additional file 1. Additional Tables
DOI: 10.6084/m9.figshare.23590380
title: Additional file 1 of Transcriptional programs are activated and microRNAs are repressed within minutes after mating in the Drosophila melanogaster female reproductive tract

description: Additional file 1. Additional Tables
DOI: 10.6084/m9.figshare.23590413
title: Additional file 1 of A preoperative ultrasound-based protocol for optimisation of fluid therapy to prevent early intraoperative hypotension: a randomised controlled study

description: Additional file 1. Online_dataset: dataset of the study. Categorical questions were marked with 1or 0. Abbreviations used in the table headers are explained as comments.
DOI: 10.6084/m9.figshare.23590413.v1
title: Additional file 1 of A preoperative ultrasound-based protocol for optimisation of fluid therapy to prevent early intraoperative hypotension: a randomised controlled study

description: Additional file 1. Online_dataset: dataset of the study. Categorical questions were marked with 1or 0. Abbreviations used in the table headers are explained as comments.
DOI: 10.6084/m9.figshare.23590414
title: Additional file 1 of Ntombi Vimbela! Sexual violence risk reduction intervention: pre and one-year post assessments from a single arm pilot feasibility study among female students in South Africa

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.23590414.v1
title: Additional file 1 of Ntombi Vimbela! Sexual violence risk reduction intervention: pre and one-year post assessments from a single arm pilot feasibility study among female students in South Africa

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.23590426
title: Additional file 1 of ExplaiNN: interpretable and transparent neural networks for genomics

description: Additional file 1. TF binding modes used in this study.
DOI: 10.6084/m9.figshare.23590432
title: Additional file 3 of ExplaiNN: interpretable and transparent neural networks for genomics

description: Additional file 3. Individual performances of 350 DanQ models trained on mouse in vivo binding data in predicting DNA binding of their respective TFs.
DOI: 10.6084/m9.figshare.23590432.v1
title: Additional file 3 of ExplaiNN: interpretable and transparent neural networks for genomics

description: Additional file 3. Individual performances of 350 DanQ models trained on mouse in vivo binding data in predicting DNA binding of their respective TFs.
DOI: 10.6084/m9.figshare.23590435
title: Additional file 4 of ExplaiNN: interpretable and transparent neural networks for genomics

description: Additional file 4. Datasets used in this study.
DOI: 10.6084/m9.figshare.23590435.v1
title: Additional file 4 of ExplaiNN: interpretable and transparent neural networks for genomics

description: Additional file 4. Datasets used in this study.
DOI: 10.6084/m9.figshare.23590440
title: Additional file 2 of Universal chromatin state annotation of the mouse genome

description: Additional file 2. Metadata and download links for input data used for model learning, CTCF elements.
DOI: 10.6084/m9.figshare.23590440.v1
title: Additional file 2 of Universal chromatin state annotation of the mouse genome

description: Additional file 2. Metadata and download links for input data used for model learning, CTCF elements.
DOI: 10.6084/m9.figshare.23590443
title: Additional file 3 of Universal chromatin state annotation of the mouse genome

description: Additional file 3. Summary characterizations of mouse full-stack states.
DOI: 10.6084/m9.figshare.23590443.v1
title: Additional file 3 of Universal chromatin state annotation of the mouse genome

description: Additional file 3. Summary characterizations of mouse full-stack states.
DOI: 10.6084/m9.figshare.23590446
title: Additional file 4 of Universal chromatin state annotation of the mouse genome

description: Additional file 4. Mouse full-stack states’ average LECIF scores, enrichments with human full-stack states, repeat classes, chromosomes and CTCF elements.
DOI: 10.6084/m9.figshare.23590446.v1
title: Additional file 4 of Universal chromatin state annotation of the mouse genome

description: Additional file 4. Mouse full-stack states’ average LECIF scores, enrichments with human full-stack states, repeat classes, chromosomes and CTCF elements.
DOI: 10.6084/m9.figshare.23590449
title: Additional file 5 of Universal chromatin state annotation of the mouse genome

description: Additional file 5. Mouse full-stack states’ relationships with per-cell-type annotations.
DOI: 10.6084/m9.figshare.23590449.v1
title: Additional file 5 of Universal chromatin state annotation of the mouse genome

description: Additional file 5. Mouse full-stack states’ relationships with per-cell-type annotations.
DOI: 10.6084/m9.figshare.23519439
title: Data and supplementary material for publication - Petroleum-derived and biopolymer microplastics affect fast start escape performance and aerobic metabolism in a marine fish.

description: The data collected on escape behaviour, routine swimming behaviour and oxygen uptake in <em>Forsterygion capito</em>. It contains the R code used to statistically analyse the data stated above and the supplementary material (Heavy metal analysis) which is referenced in the publication.
DOI: 10.6084/m9.figshare.23519439.v1
title: Data and supplementary material for publication - Petroleum-derived and biopolymer microplastics affect fast start escape performance and aerobic metabolism in a marine fish.

description: The data collected on escape behaviour, routine swimming behaviour and oxygen uptake in <em>Forsterygion capito</em>. It contains the R code used to statistically analyse the data stated above and the supplementary material (Heavy metal analysis) which is referenced in the publication.
DOI: 10.6084/m9.figshare.23590650
title: Additional file 1 of Regenerative capacity of trophoblast stem cell-derived extracellular vesicles on mesenchymal stem cells

description: Additional file 1: Supplemental Methods. Supplementary Figure 1. Flow chart of transcriptomic analysis in this study. Supplementary Figure 2. Characterization of TSC-EV and MSC-EV. Supplementary Figure 3. Increased proliferation rate of human MSCs via TSC-derived CM and EV. Supplementary Figure 4. Significant biological processes and pathway of four microRNAs primed by TSC-EVs. Supplementary Figure 5. DEGs in significant KEGG pathways and enriched GO terms in TSC-EV-treated MSCs. Supplementary Figure 6. Bone regeneration effect of TSC-EVs. Supplementary Figure 7. Anti-senescence and wound-healing effects of TSC-derived secretomes. Supplementary Figure 8. Anti-NGF effect on MSCs and TSC-EV-treated MSCs. Supplementary Table 1. Primer sequences used in qRT-PCR. Supplementary Table 2. List of antibodies and chemical materials used in this study. Supplementary Table 3. Statistics results of microRNA analysis data. Supplementary Excel Table 1. microRNA total read counts in TSC- and MSC-EV. Source Data of Western Blotting.
DOI: 10.6084/m9.figshare.23590650.v1
title: Additional file 1 of Regenerative capacity of trophoblast stem cell-derived extracellular vesicles on mesenchymal stem cells

description: Additional file 1: Supplemental Methods. Supplementary Figure 1. Flow chart of transcriptomic analysis in this study. Supplementary Figure 2. Characterization of TSC-EV and MSC-EV. Supplementary Figure 3. Increased proliferation rate of human MSCs via TSC-derived CM and EV. Supplementary Figure 4. Significant biological processes and pathway of four microRNAs primed by TSC-EVs. Supplementary Figure 5. DEGs in significant KEGG pathways and enriched GO terms in TSC-EV-treated MSCs. Supplementary Figure 6. Bone regeneration effect of TSC-EVs. Supplementary Figure 7. Anti-senescence and wound-healing effects of TSC-derived secretomes. Supplementary Figure 8. Anti-NGF effect on MSCs and TSC-EV-treated MSCs. Supplementary Table 1. Primer sequences used in qRT-PCR. Supplementary Table 2. List of antibodies and chemical materials used in this study. Supplementary Table 3. Statistics results of microRNA analysis data. Supplementary Excel Table 1. microRNA total read counts in TSC- and MSC-EV. Source Data of Western Blotting.
DOI: 10.5281/zenodo.8088554
title: BERT-Span dataset

description: Named entity recognition model and dataset for rehabilitation medicine field
DOI: 10.5281/zenodo.8088553
title: BERT-Span dataset

description: Named entity recognition model and dataset for rehabilitation medicine field
DOI: 10.7799/1969130
title: Data Files for “The 2030 National Charging Network: Estimating U.S. Light-Duty Demand for Electric Vehicle Charging Infrastructure"

description: This data set includes modeling results from “The 2030 National Charging Network: Estimating U.S. Light-Duty Demand for Electric Vehicle Charging Infrastructure” including region-specific [i.e., national, state, and core-based statistical area (CBSA)—cities/towns] electric vehicle supply equipment (EVSE) port count requirements in 2025 and 2030 for multiple scenarios described in the study. Please cite as: Wood, E., B. Borlaug, M. Moniot, D.-Y. Lee, Y. Ge, F. Yang, and Z. Liu. 2023. The 2030 National Charging Network: Estimating U.S. Light-Duty Demand for Electric Vehicle Charging Infrastructure. Golden, CO: National Renewable Energy Laboratory. NREL/TP-5400-85654.
DOI: 10.5439/1986419
title: 1290rwpwindmom (a0)

description: The radar wind profiler/radio acoustic sounding system (RWP/RASS), available in 915-MHz (for U.S. deployments) and 1290-MHz (for foreign deployments), measures wind profiles and backscattered signal strength between (nominally) 0.1 km and 5 km and virtual temperature profiles between 0.1 km and 2.5 km. However, ARM no longer operates the RASS portion. The RWP transmits electromagnetic energy into the atmosphere in as many as five directions (four tilted in opposing vertical planes and on vertical) and measures the strength and frequency of backscattered energy. Calculation of the Doppler shift of the returned signal allows calculation of the atmospheric wind profile.
DOI: 10.5439/1986420
title: 1290rwpwindspec (a0)

description: The radar wind profiler/radio acoustic sounding system (RWP/RASS), available in 915-MHz (for U.S. deployments) and 1290-MHz (for foreign deployments), measures wind profiles and backscattered signal strength between (nominally) 0.1 km and 5 km and virtual temperature profiles between 0.1 km and 2.5 km. However, ARM no longer operates the RASS portion. The RWP transmits electromagnetic energy into the atmosphere in as many as five directions (four tilted in opposing vertical planes and on vertical) and measures the strength and frequency of backscattered energy. Calculation of the Doppler shift of the returned signal allows calculation of the atmospheric wind profile.
DOI: 10.5439/1986421
title: aeri01prof3feltz (s1)

description: aeri01prof3feltz
DOI: 10.5439/1986422
title: aeriprof3feltz (s1)

description: aeriprof3feltz
DOI: 10.5439/1986423
title: aeriprof3feltz (c1)

description: aeriprof3feltz
DOI: 10.5439/1986424
title: mmcrmode4pr200608161cloth (c1)

description: mmcrmode4pr200608161cloth
DOI: 10.5439/1986425
title: mmcrmode3ge200608161cloth (c1)

description: mmcrmode3ge200608161cloth
DOI: 10.5439/1986426
title: mmcrmode2ci200608161cloth (c1)

description: mmcrmode2ci200608161cloth
DOI: 10.5439/1986427
title: mmcrmode1bl200608121cloth (c1)

description: mmcrmode1bl200608121cloth
DOI: 10.5439/1986428
title: mwrhf (b1)

description: The microwave radiometer-high frequency (MWRHF) provides time-series measurements of brightness temperatures from two channels centered at 90 and 150 GHz. These two channels are sensitive to the presence of liquid water and precipitable water vapor.
DOI: 10.25584/pnnldh/1986536
title: Model Soil Consortium 2 (MSC-2) Bacterial Isolate Genomes

description: Model Soil Consortium 2 (MSC-2) bacterial isolate genome collections are derived from the soil consortium MSC-1 multi-species cultured isolate genome collections from a previously reported WA-IsoC_MSC1.1.0 collection of a naturally evolved, model soil consortia (10.25584/WAIsoCMSC1/1635272). This collection contains 8 different isolate species cultivated under variable carbon and nitrogen sources, originating from the IAREC grassland soil field site located in Prosser, WA, USA. Genomic sequencing of one or more organisms, or genomes in general, such as meta-information on genomes, genome projects, gene names of a given organism within a natural environment. The version described here is the first version.
DOI: 10.25584/pnnldh/1986543
title: Removal of primary nutrient degrading members severely reduces growth of soil microbial communities even when additional degraders are present

description: Understanding how microorganisms within a soil community interact to support collective respiration and growth remains challenging. Here we used a model substrate, chitin, and a Model Soil Consortium, MSC-2, to investigate how individual members of a microbial community contribute to decomposition and community growth. While MSC-2 can grow using chitin as the sole carbon source, we do not yet know how the growth kinetics or final biomass yields of MSC-2 vary when certain chitin degraders, or other important members, are absent. To characterize specific roles within this representative community, we carried out experiments leaving out members of MSC-2 and measuring biomass yields and CO2 production. We chose two members to iteratively leave out (referred to by genus name): Streptomyces, as it is predicted via gene expression analysis to be a major chitin degrader in the community, and Rhodococcus as it is predicted via species co-abundance analysis to interact with several other members. Our results showed that when MSC-2 lacked Streptomyces, growth and respiration of the community was severely reduced. Removal of either Streptomyces or Rhodococcus led to major changes in abundance for several other species, pointing to a comprehensive shifting of the microbial community when important members are removed as well as alterations in the metabolic profile, especially when Streptomyces was removed. These results show that when keystone, chitin degrading members are removed, other members, even those with the potential to degrade chitin, do not fill the same metabolic niche to promote community growth. In addition, highly connected members may be removed with similar or even increased levels of growth and respiration. Our findings are critical to a better understanding of soil microbiology, specifically in how communities maintain activity when biotic or abiotic factors lead to changes in biodiversity in soil systems.
DOI: 10.25584/1986544
title: 16s Amplicon Analysis of Soil Data for Interactive effects of depth and differential irrigation on soil microbiome composition and functioning

description: Genomic DNA was isolated from soil and rhizosphere samples using the Zymo Quick-DNA fecal/soil microbe miniprep kit (catalog no. D6010) according to the manufacturer’s instructions (Zymo Research; Irvine, CA) with the modification of eluting in 100 uL elution buffer. Sample concentrations were quantified using the Qubit dsDNA HS assay kit (Thermo Fisher). For rhizosphere samples only, DNA was subsequently purified using Zymo’s ZR-96 DNA Clean & Concentrator kit (catalog no. D4024) to account for low DNA concentrations of these samples. . In each replicate block, there were five drip irrigation treatments (T1 = 100% normal irrigation, T2 = 56.25%, T3 = 37.5%, T4 = 18.75% and T5=no irrigation. On July 20, the strength of the drought treatments was increased: T1 remained at 100%, whereas T2 changed from 75% to 56.25%, T2 changed from 50% to 37.5%, and T4 changed from 25% to 18.75%. Sequencing was performed as described previously (Naylor, Fansler, et al. 2020). Sequences were amplified on the MiSeq platform (Illumina, San Diego, CA) using 16S primers (515F and 806R) specific to the V4 region. Raw sequence data was processed with the pipeline Hundo for amplicon quality control and annotation. Downstream statistical analyses on 16S datasets were performed using the program R and the packages ‘phyloseq’ and ‘vegan’.