cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15212733
title: Synthetic calcium data for the 8.8 mm-long uncorrected microendoscope

description: This dataset is related to the article titled "Aberration correction in long GRIN lens-based microendoscopes for extended field-of-view two-photon imaging in deep brain regions".

Authors: 

Andrea Sattin1,2,*, Chiara Nardin1,2,*, Simon Daste3, Monica Moroni2,4, Innem Reddy5, Carlo Liberale5, Stefano Panzeri2,6, Alexander Fleischmann3, Tommaso Fellin1,2,#

*equal contribution; #corresponding author: tommaso.fellin@iit.it

Affiliations:

1Optical Approaches to Brain Function Laboratory, Istituto Italiano di Tecnologia, Genova, Italy

2Neural Coding Laboratory, Istituto Italiano di Tecnologia, Genova and Rovereto, Italy

3Department of Neuroscience and Carney Institute for Brain Science, Brown University, Providence, USA

4Neural Computation Laboratory, Center for Neuroscience and Cognitive Systems @UniTn, Istituto Italiano di Tecnologia, Rovereto, Italy

5Biological and Environmental Sciences and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia

6Institute for Neural Information Processing, Center for Molecular Neurobiology (ZMNH), University Medical Center Hamburg-Eppendorf (UKE), Hamburg, Germany

DOI: https://doi.org/10.7554/eLife.101420.3

Description:

Data contained in this dataset were used to generate Figure 5,6 and figure supplements 1,2 related to Figure 6. Data are synthetic calcium t-series (tiff files) simulating the activity of neuronal populations virtually sampled using the 8.8 mm-long uncorrected microendoscope.  

We generated synthetic calcium t-series to evaluate the impact of the improved optical performance of long aberration corrected microendoscopes on the ability to extract information about neuronal activity. 

To build synthetic calcium data, we first generated neurons with 3D distribution and anatomical properties (i.e., cell size and cell density) similar to those measured in the mouse olfactory cortex, the ventral brain region which we imaged in vivo, and the biophysical characteristics of one of the two indicators used in our experiments, jGCaMP8f. We then simulated the optical sampling of 3D volume of neurons with the point spread function (PSF) properties of the uncorrected and corrected microendoscopes previously characterized. Fluorescence signals integrated over the PSF volume were then projected on a 2D matrix of pixels in time, with a frequency of 30 Hz, to obtain synthetic t-series (duration: 5 min).
DOI: 10.15468/dl.rj38ya
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidium pubescens Desv."
 ]
}

 The dataset includes 92 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063448-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5luuj1
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gracilinanus ignitus Díaz, Flores & Barquez, 2002",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007317-180508205500799/datasets/export for details.
DOI: 10.15468/dl.e7um8v
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphorbia chiogenes (Small) Oudejans"
 ]
}

 The dataset includes 14 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0158701-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wrx22e
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((7.025 52.375,7.075 52.375,7.075 52.425,7.025 52.425,7.025 52.375))",
 "DatasetKey is Observation.org, Nature data from around the World",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 39 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0308091-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9h3e56
title: Occurrence Download

description: A dataset containing 474 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Potanthus flava (Murray, 1875)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 474 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063458-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mc9ekn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ctenomys bergi Thomas, 1902",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007121-180508205500799/datasets/export for details.
DOI: 10.15468/dl.eftx78
title: Occurrence Download

description: A dataset containing 1079897 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-88.43994 18.27109,-84.83643 18.27109,-84.83643 21.8615,-88.43994 21.8615,-88.43994 18.27109))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1079897 records from 505 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014798-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czdpk9
title: Occurrence Download

description: A dataset containing 22423 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coccyzus americanus (Linnaeus, 1758)",
 "HasCoordinate is True",
 "Country is United States of America",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2020",
 "Month is greater than or equal to June",
 "Month is less than or equal to August",
 "DecimalLatitude is greater than or equal to 30",
 "DecimalLatitude is less than or equal to 35",
 "DecimalLongitude is greater than or equal to -89",
 "DecimalLongitude is less than or equal to -75"
 ]
}

 The dataset includes 22423 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0300203-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tkpn5w
title: Occurrence Download

description: A dataset containing 819 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crotalaria cleomifolia Welw. ex Baker"
 ]
}

 The dataset includes 819 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011295-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lr04ej
title: Occurrence Download

description: A dataset containing 443981 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sambucus nigra L."
 ]
}

 The dataset includes 443981 records from 1045 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014791-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p446qf
title: Occurrence Download

description: A dataset containing 3094 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Syrmaticus reevesii (J.E.Gray, 1829)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 3094 records from 204 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111121-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ggam4t
title: Occurrence Download

description: A dataset containing 35189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Pheugopedius felix (P.L.Sclater, 1860)"
 ]
}

 The dataset includes 35189 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111120-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bb2atu
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-99.11314 19.33309,-99.11341 19.3303,-99.11361 19.32858,-99.1096 19.32813,-99.11196 19.3323,-99.11314 19.33309))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111124-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.53vp56
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Glaucidium palmarum griscomi R.T.Moore, 1947"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111125-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ktaqeb
title: Occurrence Download

description: A dataset containing 6083 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amaranthus palmeri S.Watson"
 ]
}

 The dataset includes 6083 records from 269 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111126-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u7rwdj
title: Occurrence Download

description: A dataset containing 645828 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ophrys L."
 ]
}

 The dataset includes 645828 records from 1966 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111122-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uqchxe
title: Occurrence Download

description: A dataset containing 831 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus elliottii Engelm."
 ]
}

 The dataset includes 831 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004597-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fmv34b
title: Occurrence Download

description: A dataset containing 341 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pharomachrus mocinno mocinno"
 ]
}

 The dataset includes 341 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055459-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3x5v2
title: Occurrence Download

description: A dataset containing 1627 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Regroupement d'études et d'inventaires-Regroupement de données mammifères (hors chiroptères) récoltées sur la période de 2002-2014 par Cistude Nature"
 ]
}

 The dataset includes 1627 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017992-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ooyj0z
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynodon dactylon var. nipponicus Ohwi"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004592-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xh3eop
title: Occurrence Download

description: A dataset containing 131 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Potamocorbula amurensis (Schrenck, 1862)",
 "Country is United States of America",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 131 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004592-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.remvvn
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Programa para la Conservación Integral de Diez Especies de Plantas Prioritarias del BST"
 ]
}

 The dataset includes 208 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038988-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.36ehul
title: Occurrence Download

description: A dataset containing 22129910 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-109.42383 18.31281,-101.33789 13.41099,-89.73633 16.13026,-85.69336 18.81272,-85.51758 22.26876,-90.43945 23.56399,-93.60352 25.64153,-109.24805 30.60009,-116.2793 31.05293,-115.22461 24.04646,-109.42383 18.31281))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 22129910 records from 1853 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016752-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.23514687
title: 4-1 Features (explanatory variables) in REPM.json

description: 4-1 Features (explanatory variables) in REPM.json
DOI: 10.6084/m9.figshare.23514687.v1
title: 4-1 Features (explanatory variables) in REPM.json

description: 4-1 Features (explanatory variables) in REPM.json
DOI: 10.6084/m9.figshare.23514681
title: 4-3 Questionnaire in English and Chinese translations.pdf

description: 4-3 Questionnaire in English and Chinese translations.pdf
DOI: 10.6084/m9.figshare.23514690
title: 3-2 Household EEG-related information.json

description: 3-2 Household EEG-related information.json
DOI: 10.6084/m9.figshare.23514690.v1
title: 3-2 Household EEG-related information.json

description: 3-2 Household EEG-related information.json
DOI: 10.6084/m9.figshare.23514693
title: 3-1 Household basic information.json

description: 3-1 Household basic information.json
DOI: 10.6084/m9.figshare.23514696
title: 2-6 Province - Variable speed room air conditioners.json

description: 2-6 Province - Variable speed room air conditioners.json
DOI: 10.6084/m9.figshare.23514696.v1
title: 2-6 Province - Variable speed room air conditioners.json

description: 2-6 Province - Variable speed room air conditioners.json
DOI: 10.6084/m9.figshare.23514699
title: 2-5 Province - Room air conditioners.json

description:  
<strong>2-5 Province - Room air conditioners.json</strong>
DOI: 10.6084/m9.figshare.23514699.v1
title: 2-5 Province - Room air conditioners.json

description:  
<strong>2-5 Province - Room air conditioners.json</strong>
DOI: 10.6084/m9.figshare.23514702
title: 2-4 Province - Electrical storage water heater.json

description: 2-4 Province - Electrical storage water heater.json
DOI: 10.6084/m9.figshare.24911187.v2
title: <b>加权基因共表达网络分析</b><b> identifies important modules and hub genes involved in the regulation of breast muscle yield in broilers</b>

description: 为了鉴定影响鸡乳肌产量的共表达网络和枢纽基因，我们基于来自18817只肉鸡的18个胸大肌转录组数据集进行了加权基因共表达网络分析（WGCNA）。
DOI: 10.6084/m9.figshare.23514702.v1
title: 2-4 Province - Electrical storage water heater.json

description: 2-4 Province - Electrical storage water heater.json
DOI: 10.6084/m9.figshare.23514705
title: 2-3 Province - Household drum washing machine.json

description: 2-3 Province - Household drum washing machine.json
DOI: 10.6084/m9.figshare.23514708
title: 2-2 Province - Household impeller washing machine.json

description: 2-2 Province - Household impeller washing machine.json
DOI: 10.6084/m9.figshare.23514708.v1
title: 2-2 Province - Household impeller washing machine.json

description: 2-2 Province - Household impeller washing machine.json
DOI: 10.6084/m9.figshare.23514711
title: 2-1 Province - WG market share.json

description: 2-1 Province - WG market share.json
DOI: 10.6084/m9.figshare.23514711.v1
title: 2-1 Province - WG market share.json

description: 2-1 Province - WG market share.json
DOI: 10.6084/m9.figshare.23514717
title: 1-2 National - Weighted average EEG.json

description: 1-2 National - Weighted average EEG.json
DOI: 10.6084/m9.figshare.23514717.v1
title: 1-2 National - Weighted average EEG.json

description: 1-2 National - Weighted average EEG.json
DOI: 10.6084/m9.figshare.12504671
title: Table S2. K-bentonites in Ordovician–Silurian transition from South China: Implications for tectonic evolution in the northern margin of Gondwana

description: Table S2. LA–ICP–SFMS zircon U–Pb isotopic and analysis of the K-bentonite samples B2, B14 and B18 in the Songmutang section of the Upper Yangtze region.
DOI: 10.6084/m9.figshare.12504671.v1
title: Table S2. K-bentonites in Ordovician–Silurian transition from South China: Implications for tectonic evolution in the northern margin of Gondwana

description: Table S2. LA–ICP–SFMS zircon U–Pb isotopic and analysis of the K-bentonite samples B2, B14 and B18 in the Songmutang section of the Upper Yangtze region.
DOI: 10.6084/m9.figshare.23514720
title: 1-1 National - WG market share.json

description: 1-1 National - WG market share.json
DOI: 10.15124/b59ee2dc-844e-4c7b-a971-52bd0b750fff
title: Data for the article "Active Taylor dispersion with Fourier methods: biased swimming cells with absorbing boundaries"

description: The dataset contains all the codes and data related to the study:

Caldag, H. O., Bryant, N. & Bees. M. A. Active Taylor dispersion with Fourier methods: biased swimming cells with absorbing boundaries
DOI: 10.15468/vzj33b
title: 2020_SOPTOM_4

description: 2020_SOPTOM_PNPC_giens:SOPTOM
DOI: 10.15468/whjbac
title: Parc éolien du Chemin Vert - CheminVert_Envol_Chiro_PE_passif

description: Espèces chiroptérologiques identifiées dans le cadre de l'étude d'impact d'un projet éolien sur une zone de la commune de Coulours, par Envol Environnement, d'avril 2018 à novembre 2018, lors d'écoutes en hauteur grâce à un appareil SM3Bat.
DOI: 10.6084/m9.figshare.14601816
title: Additional file 2 of Network analysis indicating the pharmacological mechanism of Yunpi-Qufeng-Chushi-prescription in prophylactic treatment of rheumatoid arthritis

description: Additional file 2. Targets information of YQCP.
DOI: 10.6084/m9.figshare.14601816.v1
title: Additional file 2 of Network analysis indicating the pharmacological mechanism of Yunpi-Qufeng-Chushi-prescription in prophylactic treatment of rheumatoid arthritis

description: Additional file 2. Targets information of YQCP.
DOI: 10.15468/mc4kj2
title: CardObs : Observations naturalistes issues de l'outil CardObs-CD95 - Recherche du Vertigo de Des Moulins et du Vertigo étroit sur les ENS du Marais de Baillon, de l’Étang de Vallière, du Marais du Moulin Neuf et du Ru de Presles

description: Recherche du Vertigo de Des Moulins et du Vertigo étroit sur les ENS du Marais de Baillon, de l’Étang de Vallière, du Marais du Moulin Neuf et du Ru de Presles
DOI: 10.6084/m9.figshare.12504674
title: Table S5. K-bentonites in Ordovician–Silurian transition from South China: Implications for tectonic evolution in the northern margin of Gondwana

description: Table S5. Trace-element concentrations of K-bentonites in the Songmutang section of the Upper Yangtze region (ppm).
DOI: 10.6084/m9.figshare.12504674.v1
title: Table S5. K-bentonites in Ordovician–Silurian transition from South China: Implications for tectonic evolution in the northern margin of Gondwana

description: Table S5. Trace-element concentrations of K-bentonites in the Songmutang section of the Upper Yangtze region (ppm).
DOI: 10.15468/s5xx3g
title: 2020_Parc National de Port Cros_15

description: 2020_PNPC_Giens_SOPTOM:Parc National de Port Cros
DOI: 10.6084/m9.figshare.12504677
title: Table S4. K-bentonites in Ordovician–Silurian transition from South China: Implications for tectonic evolution in the northern margin of Gondwana

description: Table S4. Major element concentrations of K-bentonites in the Songmutang section of the Upper Yangtze region (wt%).
DOI: 10.6084/m9.figshare.12504677.v1
title: Table S4. K-bentonites in Ordovician–Silurian transition from South China: Implications for tectonic evolution in the northern margin of Gondwana

description: Table S4. Major element concentrations of K-bentonites in the Songmutang section of the Upper Yangtze region (wt%).
DOI: 10.15468/huu7em
title: 30 - Inventaires mycologiques - ENS la Rolande et Maupas 2017-2018

description: ENS la Rolande et Maupas 2017-2018
DOI: 10.15468/ufkjgu
title: Fonderie d'aluminium bas carbone

description: Le projet est une fonderie d’aluminium, utilisant comme matières premières des chutes de production (en particulier issues de l’industrie des huisseries d’aluminium) et des déchets d’aluminium. Porté par des industriels du secteur de l’extrusion de profilés aluminium, le projet permettra de valoriser notamment leurs propres chutes et déchets. La fonderie produira des billettes d’aluminium qui seront ensuite utilisées comme matière première. Etant une installation soumise à la directive n°2010/75/EU du 24 novembre 2010 relative aux émissions industrielles (dite directive IED), le projet est soumis à la réalisation d’une évaluation environnementale.
DOI: 10.15468/vgp4uw
title: Parc Eolien de BAJOUVE-Suivi post-implantation du parc éolien de Bajouve en 2018

description: Suivi de la mortalité des oiseaux et des chauves-souris Suivi avifaune Suivi en continu des chiroptères
DOI: 10.6084/m9.figshare.12504683
title: Table S3. K-bentonites in Ordovician–Silurian transition from South China: Implications for tectonic evolution in the northern margin of Gondwana

description: Table S3. Zircon trace element data (in ppm) of the K-bentonite samples B2, B14 and B18 in the Songmutang section of the Upper Yangtze region.
DOI: 10.6084/m9.figshare.12504683.v1
title: Table S3. K-bentonites in Ordovician–Silurian transition from South China: Implications for tectonic evolution in the northern margin of Gondwana

description: Table S3. Zircon trace element data (in ppm) of the K-bentonite samples B2, B14 and B18 in the Songmutang section of the Upper Yangtze region.
DOI: 10.15468/5hc49u
title: 2021_Communauté de Communes des Alpes d'Azur_4

description: 2021_CCAA_donnee_2018:Communauté de Communes des Alpes d'Azur
DOI: 10.6084/m9.figshare.23514732
title: Readme

description: meta data file