cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2nz43x
title: CCDC 2471819: Experimental Crystal Structure Determination

description: Related Article: Krzysztof A. Konieczny, Rishika Rai, José A. Rodriguez, Miguel A. García-Garibay|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c14347
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nz44y
title: CCDC 2471820: Experimental Crystal Structure Determination

description: Related Article: Krzysztof A. Konieczny, Rishika Rai, José A. Rodriguez, Miguel A. García-Garibay|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c14347
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2nz45z
title: CCDC 2471821: Experimental Crystal Structure Determination

description: Related Article: Krzysztof A. Konieczny, Rishika Rai, José A. Rodriguez, Miguel A. García-Garibay|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c14347
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.r34u7a
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Spodoptera cosmioides"
 ]
}

 The dataset includes 180 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054674-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30893609.v1
title: A dataset on advanced age and pregnancy outcomes

description: This study was a retrospective and case-controlled study that included 12073 pregnant women over 35 years-of-age and gave birth in Hangzhou, China between 2018 and 2022. We investigated the perinatal features and pregnancy outcomes of three groups of pregnant women aged 35–39 years (n=10544), and 40–44 years (n=1469) and ≥ 45 years (n=60).
DOI: 10.25921/48xy-r685
title: Physical, Biogeochemical, and Ecosystem Studies for Sub-Arctic Sea taken by CTD and other instruments from the R/V Mirai in the North Pacific from 2017-07-10 to 2017-08-21 (NCEI Accession 0304368)

description: A highly productive habitat named as “Green Belt” locates along the edge of the continental shelf in the Bering Sea. Enormous seabirds and whales accumulate in a limited area of the south-eastern Bering Sea during summer, which is called as “the Aleutian Magic”. To elucidate the mechanism of this biological phenomenon, we conducted oceanographic researches using R/V Mirai during the period of the Aleutian Magic. This cruise started on August 5, 2017 at Dutch Harbor, Alaska, USA and ended on August 21, 2017 at Dutch Harbor. We conducted bottom observations and biological sampling using a deep-tow camera system equipped with a dredger (11 tows), multi-layer plankton sampling using the Vertical Multiple Plankton Sampler (VMPS, 32 casts), sediment core sampling using a multiple corer (13 casts), water sampling and physico-chemical measurements using a CTD and Niskin bottle carousel (46 casts in total) at depths between 0 – 2500 m. Sediments in areas shallower than 1000 m were coarse and no evidence was seen for xtraordinary organic falls. In contrast, sediments in areas deeper than 1500 m were fine, which were similar to “ordinary” deep-sea sediments. About 10 times of the Aleutian Magic were observed during this cruise at a depth of 100 m at the east end of the Bering Canyon. These events occurred in a small region (named as “Station M”), which was similar to that of previous records. CTD/hydro casts and plankton sampling were conducted across Station M. Higher concentrations of turbidity and chlorophyll were observed at downstream location from the station. Many Limacina and Clione gastropods were collected and a dense aggregation of juvenile cods were observed at Station M.
Cruise data are available from the JAMSTEC DARWIN portal, see the Documentation on the dataset landing page.
This dataset is U.S. State Department MSR U2016-038 as part of the World Data Services for Geophysics and Oceanography.
DOI: 10.6084/m9.figshare.30893609
title: A dataset on advanced age and pregnancy outcomes

description: This study was a retrospective and case-controlled study that included 12073 pregnant women over 35 years-of-age and gave birth in Hangzhou, China between 2018 and 2022. We investigated the perinatal features and pregnancy outcomes of three groups of pregnant women aged 35–39 years (n=10544), and 40–44 years (n=1469) and ≥ 45 years (n=60).
DOI: 10.3886/e241285
title: Dissolved greenhouse gas concentrations and fluxes from Wetlands P7 and P8 of the Cottonwood Lake Study area, Stutsman County, North Dakota, 2015

description: A study was conducted to assess the relationships among carbon mineralization, sulfate reduction and greenhouse gas emissions in prairie pothole wetlands. These data are for dissolved methane and carbon dioxide concentrations and fluxes. Dissolved gas concentrations in the water column and fluxes to the atmosphere were estimated from April through November, 2015 for wetlands P7 and P8 of the Cottonwood Lake Study area, Stutsman County, North Dakota. Dissolved gases in the water column were collected every two weeks using a pumping-induced ebullition device. Gas flux samples were collected concurrently at the water-atmosphere interface using the vented static-chamber method. Gas concentrations of the gas samples were determined using gas chromatography. Air and water temperature and water depth also were collected concurrently. These data directly support the associated publication “Abundant carbon substrates drive extremely high sulfate reduction rates and methane fluxes in Prairie Pothole Wetlands” which is referenced within the Metadata.<br>
description: Downloaded 2025-11-25.
DOI: 10.3886/e241285v1
title: Dissolved greenhouse gas concentrations and fluxes from Wetlands P7 and P8 of the Cottonwood Lake Study area, Stutsman County, North Dakota, 2015

description: A study was conducted to assess the relationships among carbon mineralization, sulfate reduction and greenhouse gas emissions in prairie pothole wetlands. These data are for dissolved methane and carbon dioxide concentrations and fluxes. Dissolved gas concentrations in the water column and fluxes to the atmosphere were estimated from April through November, 2015 for wetlands P7 and P8 of the Cottonwood Lake Study area, Stutsman County, North Dakota. Dissolved gases in the water column were collected every two weeks using a pumping-induced ebullition device. Gas flux samples were collected concurrently at the water-atmosphere interface using the vented static-chamber method. Gas concentrations of the gas samples were determined using gas chromatography. Air and water temperature and water depth also were collected concurrently. These data directly support the associated publication “Abundant carbon substrates drive extremely high sulfate reduction rates and methane fluxes in Prairie Pothole Wetlands” which is referenced within the Metadata.<br>
description: Downloaded 2025-11-25.
DOI: 10.15468/dl.kgpsmz
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Spodoptera cosmioides"
 ]
}

 The dataset includes 180 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054675-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17605/osf.io/yptuq
title: Emotional Intelligence and dark triad

description: Database
DOI: 10.6084/m9.figshare.30893630
title: NorthForestPhenology

description: Seasonal trade-offs in diurnal asymmetric warming govern physiological and phenological controls of forest carbon uptake
DOI: 10.6084/m9.figshare.30893630.v1
title: NorthForestPhenology

description: Seasonal trade-offs in diurnal asymmetric warming govern physiological and phenological controls of forest carbon uptake
DOI: 10.25921/t2ab-et76
title: Dissolved inorganic carbon, total alkalinity, pH on total scale, water temperature, salinity, dissolved oxygen, nutrients and other variables collected from discrete samples and profile observations during R/V W. T. Hogarth Coastal cruise HG25083 (EXPOCODE 33SGDK20250324) in the North Atlantic Ocean and Gulf of America from 2025-03-24 to 2025-03-31 (NCEI Accession 0309257)

description: This dataset consists of dissolved inorganic carbon, total alkalinity, pH on total scale, water temperature, salinity, dissolved oxygen, nutrients and other variables collected from discrete samples and profile observations during R/V W. T. Hogarth Coastal cruise HG25083 (EXPOCODE 33SGDK20250324) in the North Atlantic Ocean and Gulf of America from 2025-03-24 to 2025-03-31. Near-shore estuarine and coastal regions are where most recreational fishing and tourism occur, yet they are vastly under-sampled. Their susceptibility to OA is not well understood due to their high biogeochemical variability. These regions are affected by land-side processes such as river discharge and run-offs and ocean-side processes through slope water exchange. A full determination of the carbonate system in these regions in conjunction with open ocean measurements is needed to increase our understanding of the effects of OA on ocean health and fisheries and our ability to predict them. In this project, we propose to augment several observational campaigns by 1) adding a carbonate component to the harmful algal blooms (HABs) monitoring cruises conducted periodically on the Western Florida Shelf in order to study potential links between HABs and OA, 2) renewing our collaboration with select National Parks to complement and enhance our near-shore data collection on the Northern Gulf of America and US East Coast, and 3) complementing our underway surface pCO2 measurements in the Gulf of America and US East Coast with underway total alkalinity measurements to help us improve our fundamental understanding of nearshore OA processes. The addition of these measurements to the current assets already present in the region would enhance our understanding of the linkage between nearshore and open ocean processes and better assess the mechanisms and impacts of OA on the biogeochemistry, biology and their economic consequences.
DOI: 10.25921/edxc-dg20
title: Dissolved inorganic carbon, total alkalinity, pH on total scale, and other variables collected from discrete samples and profile observations during the R/V F. G. Walton Smith cruise WS25024 (EXPOCODE 33WA20250124) in the North Atlantic Ocean and Gulf of America from 2025-01-24 to 2025-01-31 (NCEI Accession 0309259)

description: This dataset consists of dissolved inorganic carbon, total alkalinity, pH on total scale, and other variables collected from discrete samples and profile observations during the R/V F. G. Walton Smith cruise WS25024 (EXPOCODE 33WA20250124) in the North Atlantic Ocean and Gulf of America from from 2025-01-24 to 2025-01-31. Near-shore estuarine and coastal regions are where most recreational fishing and tourism occur, yet they are vastly under-sampled. Their susceptibility to OA is not well understood due to their high biogeochemical variability. These regions are affected by land-side processes such as river discharge and run-offs and ocean-side processes through slope water exchange. A full determination of the carbonate system in these regions in conjunction with open ocean measurements is needed to increase our understanding of the effects of OA on ocean health and fisheries and our ability to predict them. In this project, we propose to augment several observational campaigns by 1) adding a carbonate component to the harmful algal blooms (HABs) monitoring cruises conducted periodically on the Western Florida Shelf in order to study potential links between HABs and OA, 2) renewing our collaboration with select National Parks to complement and enhance our near-shore data collection on the Northern Gulf of America and US East Coast, and 3) complementing our underway surface pCO2 measurements in the Gulf of America and US East Coast with underway total alkalinity measurements to help us improve our fundamental understanding of nearshore OA processes. The addition of these measurements to the current assets already present in the region would enhance our understanding of the linkage between nearshore and open ocean processes and better assess the mechanisms and impacts of OA on the biogeochemistry, biology and their economic consequences.
DOI: 10.25921/yxxy-vw91
title: Dissolved inorganic carbon, total alkalinity, pH on total scale, and other variables collected from discrete samples and profile observations during the R/V F. G. Walton Smith cruise WS25130 (EXPOCODE 33WA20250510) in the North Atlantic Ocean and Gulf of America from 2025-05-10 to 2025-05-17 (NCEI Accession 0309261)

description: This dataset consists of dissolved inorganic carbon, total alkalinity, pH on total scale, and other variables collected from discrete samples and profile observations during the R/V F. G. Walton Smith cruise WS25130 (EXPOCODE 33WA20250510) in the North Atlantic Ocean and Gulf of America. Near-shore estuarine and coastal regions are where most recreational fishing and tourism occur, yet they are vastly under-sampled. Their susceptibility to OA is not well understood due to their high biogeochemical variability. These regions are affected by land-side processes such as river discharge and run-offs and ocean-side processes through slope water exchange. A full determination of the carbonate system in these regions in conjunction with open ocean measurements is needed to increase our understanding of the effects of OA on ocean health and fisheries and our ability to predict them. In this project, we propose to augment several observational campaigns by 1) adding a carbonate component to the harmful algal blooms (HABs) monitoring cruises conducted periodically on the Western Florida Shelf in order to study potential links between HABs and OA, 2) renewing our collaboration with select National Parks to complement and enhance our near-shore data collection on the Northern Gulf of America and US East Coast, and 3) complementing our underway surface pCO2 measurements in the Gulf of America and US East Coast with underway total alkalinity measurements to help us improve our fundamental understanding of nearshore OA processes. The addition of these measurements to the current assets already present in the region would enhance our understanding of the linkage between nearshore and open ocean processes and better assess the mechanisms and impacts of OA on the biogeochemistry, biology and their economic consequences.
DOI: 10.5281/zenodo.17938606
title: Supplementary data of the Master's thesis: "Comparative genomics of Bifidobacterium longum using 1,566 publicly available isolate and metagenome-assembled genomes"

description: Supplementary data tables and a supplementary data guide of the Master's thesis: "Comparative genomics of Bifidobacterium longum using 1,566 publicly available isolate and metagenome-assembled genomes".

Description of the supplementary data. Abbreviations: HGBL = Human Gut Bifidobacterium longum genome catalogue, CAZyme = carbohydrate-active enzyme, ARG = antibiotic resistance gene.






Table name



Table content





Table S1



Metadata of all collected genomes





Table S2



HGBL metadata





Table S3



Quality comparison results





Table S4



Summary of dbCAN3 annotation results





Table S5



Summary of RGI annotation results





Table S6



CAZyme category count enrichment results





Table S7



ARG count enrichment results





Table S8



Enrichment results of individual CAZymes





Table S9



Enrichment results of individual ARGs
DOI: 10.5281/zenodo.17938607
title: Supplementary data of the Master's thesis: "Comparative genomics of Bifidobacterium longum using 1,566 publicly available isolate and metagenome-assembled genomes"

description: Supplementary data tables and a supplementary data guide of the Master's thesis: "Comparative genomics of Bifidobacterium longum using 1,566 publicly available isolate and metagenome-assembled genomes".

Description of the supplementary data. Abbreviations: HGBL = Human Gut Bifidobacterium longum genome catalogue, CAZyme = carbohydrate-active enzyme, ARG = antibiotic resistance gene.






Table name



Table content





Table S1



Metadata of all collected genomes





Table S2



HGBL metadata





Table S3



Quality comparison results





Table S4



Summary of dbCAN3 annotation results





Table S5



Summary of RGI annotation results





Table S6



CAZyme category count enrichment results





Table S7



ARG count enrichment results





Table S8



Enrichment results of individual CAZymes





Table S9



Enrichment results of individual ARGs
DOI: 10.25921/02ng-rs08
title: Dissolved inorganic carbon, total alkalinity, pH on total scale, and other variables collected from discrete samples and profile observations during the R/V F. G. Walton Smith cruise WS25221 (EXPOCODE 33WA20250809) in the North Atlantic Ocean, Gulf of America from 2025-08-09 to 2025-08-17 (NCEI Accession 0309699)

description: This dataset consists of Dissolved inorganic carbon, total alkalinity, pH on total scale, and other variables collected from discrete samples and profile observations during the R/V F. G. Walton Smith cruise WS25221 (EXPOCODE 33WA20250809) in the North Atlantic Ocean, Gulf of America from 2025-08-09 to 2025-08-17. Near-shore estuarine and coastal regions are where most recreational fishing and tourism occur, yet they are vastly under-sampled. Their susceptibility to OA is not well understood due to their high biogeochemical variability. These regions are affected by land-side processes such as river discharge and run-offs and ocean-side processes through slope water exchange. A full determination of the carbonate system in these regions in conjunction with open ocean measurements is needed to increase our understanding of the effects of OA on ocean health and fisheries and our ability to predict them. In this project, we propose to augment several observational campaigns by 1) adding a carbonate component to the harmful algal blooms (HABs) monitoring cruises conducted periodically on the Western Florida Shelf in order to study potential links between HABs and OA, 2) renewing our collaboration with select National Parks to complement and enhance our near-shore data collection on the Northern Gulf of America and US East Coast, and 3) complementing our underway surface pCO2 measurements in the Gulf of America and US East Coast with underway total alkalinity measurements to help us improve our fundamental understanding of nearshore OA processes. The addition of these measurements to the current assets already present in the region would enhance our understanding of the linkage between nearshore and open ocean processes and better assess the mechanisms and impacts of OA on the biogeochemistry, biology and their economic consequences.
DOI: 10.15468/dl.essc79
title: Occurrence Download

description: A dataset containing 10710 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Spodoptera frugiperda"
 ]
}

 The dataset includes 10710 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054676-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25921/r756-3r24
title: NCCOS Mapping: Collaborative Benthic Habitat Mapping in the Nearshore Waters of the Great Lakes Basin: Data collected during cruise GL-23-01 at Madeline Island, Lake Superior from 2023-06-20 to 2023-08-04

description: This dataset includes information and environmental data collected during the GL-23-01 mapping cruise by an assortment of equipment including a drop camera, remotely operated vehicle, and a ponar dredge. These data were collected to map benthic habitats around Madeline Island and Gull Island Shoal, Lake Superior.
DOI: 10.25921/ap36-yy56
title: NCCOS Mapping: Collaborative Benthic Habitat Mapping in the Nearshore Waters of the Great Lakes Basin: Data collected during cruise GL-24-01 in the Wisconsin Shipwreck Coast National Marine Sanctuary (WSCNMS), Lake Michigan from 2024-04-30 to 2024-10-16

description: This data collection includes information and environmental data collected during the GL-24-01 mapping cruise by an assortment of equipment including a drop camera, remotely operated vehicle, and ponar dredge.
DOI: 10.25921/rsxk-4030
title: NCCOS Assessment: Digitized histological slides for stony coral tissue loss disease (SCTLD) development in Colpophylia natans, Montastrea cavernosa, Orbicella faveolata, and Orbicella franskii colonies located in the Dry Tortugas, 2021-09-01 to 2022-09-01

description: This digitized histological slide collection includes tissue biopsies from wild colonies of Colpophylia natans (CNAT), Montastrea cavernosa (MCAV), Orbicella faveolata (OFAV), and Orbicella franskii (OFRA) located at three sites throughout the Dry Tortugas and collected at four time points to capture pre-disease and endemic disease states (September 2021, February 2022, June 2022, and August 2022). Slides were stained with either hematoxylin and eosin stains to highlight tissue morphology or Movat’s pentachrome stain to differentiate connective tissues (mucin, collagen, elastin, myosin). All slides were scanned on a digital slide scanner to a maximum magnification of 40x. All images are in an .svs format. This dataset only includes the raw histological slide collection and associated metadata from biopsied coral colonies. Results from the analysis of the histological slides will be available from partner labs in separate associated datasets.
DOI: 10.5281/zenodo.17951530
title: Overview of 1284 articles on masks

description: Spreadsheet describing 1284 articles on masks
DOI: 10.5281/zenodo.17951529
title: Overview of 1284 articles on masks

description: Spreadsheet describing 1284 articles on masks