cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48597/cweh-2579
title: Measurement of Cesium at Harwell

description: Measurement of Cesium at Harwell
DOI: 10.48597/d2ua-be6j
title: Measurement of Vanadium at Harwell

description: Measurement of Vanadium at Harwell
DOI: 10.48597/dwua-hh5m
title: Measurement of Aluminium_27 at Harwell

description: Measurement of Aluminium_27 at Harwell
DOI: 10.48597/v98u-w5ht
title: Measurement of Iron_57 at Harwell

description: Measurement of Iron_57 at Harwell
DOI: 10.48597/3e69-zz95
title: Measurement of Cadmium at Harwell

description: Measurement of Cadmium at Harwell
DOI: 10.48597/wvhd-n2xg
title: Measurement of Zinc at Harwell

description: Measurement of Zinc at Harwell
DOI: 10.48597/6kbr-j2e5
title: Measurement of Lead at Harwell

description: Measurement of Lead at Harwell
DOI: 10.48597/72g5-dybd
title: Measurement of Zinc at Harwell

description: Measurement of Zinc at Harwell
DOI: 10.48597/8bku-uxq9
title: Measurement of Iron_57 at Harwell

description: Measurement of Iron_57 at Harwell
DOI: 10.48597/aatb-sj54
title: Measurement of Vanadium at Harwell

description: Measurement of Vanadium at Harwell
DOI: 10.48597/d86v-6m5k
title: Measurement of Nickel_60 at Harwell

description: Measurement of Nickel_60 at Harwell
DOI: 10.48597/f4h4-76vq
title: Measurement of Copper at Harwell

description: Measurement of Copper at Harwell
DOI: 10.48597/gfac-4d79
title: Measurement of Chromium at Harwell

description: Measurement of Chromium at Harwell
DOI: 10.48597/hgbq-hv5a
title: Measurement of Manganese at Harwell

description: Measurement of Manganese at Harwell
DOI: 10.48597/pzms-heww
title: Measurement of Selenium at Harwell

description: Measurement of Selenium at Harwell
DOI: 10.48597/yms6-yvv5
title: Measurement of Arsenic at Harwell

description: Measurement of Arsenic at Harwell
DOI: 10.48597/2bjt-hygg
title: Measurement of Nickel_60 at Harwell

description: Measurement of Nickel_60 at Harwell
DOI: 10.48597/zufn-k56n
title: Measurement of Cobalt at Harwell

description: Measurement of Cobalt at Harwell
DOI: 10.48597/3e7b-tcut
title: Measurement of Chromium at Harwell

description: Measurement of Chromium at Harwell
DOI: 10.48597/5ad7-s34n
title: Measurement of Cadmium at Harwell

description: Measurement of Cadmium at Harwell
DOI: 10.48597/7wgk-r4d6
title: Measurement of Vanadium at Harwell

description: Measurement of Vanadium at Harwell
DOI: 10.48597/86sh-n2ds
title: Measurement of Iron_57 at Harwell

description: Measurement of Iron_57 at Harwell
DOI: 10.48597/aw64-z7h6
title: Measurement of Zinc at Harwell

description: Measurement of Zinc at Harwell
DOI: 10.48597/nw5b-ug4f
title: Measurement of Copper at Harwell

description: Measurement of Copper at Harwell
DOI: 10.48597/sg3f-mf3a
title: Measurement of Manganese at Harwell

description: Measurement of Manganese at Harwell
DOI: 10.48597/wm5t-237b
title: Measurement of Arsenic at Harwell

description: Measurement of Arsenic at Harwell
DOI: 10.48597/x4y2-kz9r
title: Measurement of Selenium at Harwell

description: Measurement of Selenium at Harwell
DOI: 10.48597/yv4s-sg83
title: Measurement of Lead at Harwell

description: Measurement of Lead at Harwell
DOI: 10.48597/zc6m-28gv
title: Measurement of Cobalt at Harwell

description: Measurement of Cobalt at Harwell
DOI: 10.48597/mmww-augy
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/q2yh-24jt
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/xg35-m94x
title: Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.15468/dl.rbtevd
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Dioscorea nipponica Makino, Abies chensiensis Tiegh.)",
 "Year 2019-2024"
 ]
}

 The dataset includes 38 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000031-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c47j4g
title: Occurrence Download

description: A dataset containing 359 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-73.22229 -24.48528,-30.77771 -24.48528,-30.77771 -7.51472,-73.22229 -7.51472,-73.22229 -24.48528))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vellozia variabilis Mart. ex Schult. & Schult.f."
 ]
}

 The dataset includes 359 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000032-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4xe8xm
title: Occurrence Download

description: A dataset containing 528 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Spain",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ranunculus auricomus L."
 ]
}

 The dataset includes 528 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000033-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q38z9w
title: Occurrence Download

description: A dataset containing 359 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-73.22229 -24.48528,-30.77771 -24.48528,-30.77771 -7.51472,-73.22229 -7.51472,-73.22229 -24.48528))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vellozia variabilis Mart. ex Schult. & Schult.f."
 ]
}

 The dataset includes 359 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000034-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.guzgw2
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "TaxonKey is Dalbulus maidis (DeLong, 1923)"
 ]
}

 The dataset includes 18 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000036-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48597/qjnr-rmwb
title: Measurement of Heavy metals at Auchencorth Moss

description: Measurement of Heavy metals at Auchencorth Moss
DOI: 10.15468/dl.xjz9hw
title: Occurrence Download

description: A dataset containing 2535 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Asia, Europe)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Swertia bimaculata (Siebold & Zucc.) Hook.fil. & Thomson ex C.B.Clarke"
 ]
}

 The dataset includes 2535 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000037-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48597/gb5r-vk9a
title: Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/fxyt-jtdm
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/2gzq-7fsj
title: Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/hb5r-7ux4
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/hu6w-ysrj
title: Measurement of Heavy metals at Auchencorth Moss

description: Measurement of Heavy metals at Auchencorth Moss
DOI: 10.48597/jzfg-eb7n
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/zgd6-n6qs
title: Heavy metals at Auchencorth Moss

description: Measurement of Heavy metals at Auchencorth Moss
DOI: 10.48597/dqxe-2uzv
title: Inorganics in air and particle phase at ISAC Bologna II

description: Measurement of Inorganics in air and particle phase at ISAC Bologna II
DOI: 10.48597/mn7f-ckhb
title: Measurement of Heavy metals at Auchencorth Moss

description: Measurement of Heavy metals at Auchencorth Moss
DOI: 10.48597/nmbp-euq4
title: Measurement of Inorganics in air and particle phase at ISAC Bologna II

description: Measurement of Inorganics in air and particle phase at ISAC Bologna II
DOI: 10.48597/qrh9-brhw
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/z5fy-tmrr
title: Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/7x3a-wamx
title: Measurement of Inorganics in air and particle phase at ISAC Bologna II

description: Measurement of Inorganics in air and particle phase at ISAC Bologna II
DOI: 10.48597/ghbu-8k6m
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/j4pk-f5az
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/j8pe-wwky
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.48597/jqu7-5275
title: Measurement of Heavy metals at Auchencorth Moss

description: Measurement of Heavy metals at Auchencorth Moss
DOI: 10.48597/q67g-krw6
title: Measurement of Heavy metals at Harwell

description: Measurement of Heavy metals at Harwell
DOI: 10.15468/dl.keh6qx
title: Occurrence Download

description: A dataset containing 140762 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is NHMD Entomology Collection"
 ]
}

 The dataset includes 140762 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000025-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b32wey
title: Occurrence Download

description: A dataset containing 3961 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Schinopsis Engl."
 ]
}

 The dataset includes 3961 records from 188 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000038-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnqkgq
title: Occurrence Download

description: A dataset containing 772 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Freshwater Lamprey Survey Data"
 ]
}

 The dataset includes 772 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000040-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68f65q
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isatis pachycarpa"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016100-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2b9bgz
title: Occurrence Download

description: A dataset containing 1181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Robinia pseudoacacia",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1181 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016101-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15533626
title: Benchmark Datasets: A Long-Tailed Class-Incremental Annotation Framework for Single-Cell Transcriptomics

description: This dataset collection provides a curated benchmark for evaluating long-tailed and class-incremental annotation methods in single-cell RNA sequencing (scRNA-seq). It includes five widely used human single-cell transcriptomic datasets spanning diverse tissues and biological contexts:





He: Human embryonic skeletal development (Cell Research, 2021)




Madissoon: Stability of lung, spleen, and esophagus after cold preservation (Genome Biology, 2020)




Stewart: Immune zonation in human kidney (Science, 2019)




Vento: Early maternal–fetal interface reconstruction (Nature, 2018)




Zheng68k: Large-scale profiling of PBMCs using 10x Genomics (Nature Communications, 2017)



These datasets have been preprocessed and harmonized to support evaluation in long-tailed class distribution scenarios and class-incremental learning pipelines.

They are used in our study proposing ZhangCIA (single-cell Long-Tailed Class-Incremental Annotation), a novel framework addressing the challenge of annotating under-represented cell types and incrementally emerging cell classes in scRNA-seq data. The datasets in this collection serve as the experimental foundation for training and evaluating ZhangCIA across diverse biological contexts.

Please cite the original publications when using the datasets:





Jian He et al., Cell Research, 2021.




E. Madissoon et al., Genome Biology, 2020.




Benjamin J. Stewart et al., Science, 2019.




Roser Vento-Tormo et al., Nature, 2018.




G. X. Y. Zheng et al., Nature Communications, 2017.



If you use this dataset in your research, please also cite our work introducing ZhangCIA (citation to be provided upon publication).
DOI: 10.5281/zenodo.15533627
title: Benchmark Datasets: A Long-Tailed Class-Incremental Annotation Framework for Single-Cell Transcriptomics

description: This dataset collection provides a curated benchmark for evaluating long-tailed and class-incremental annotation methods in single-cell RNA sequencing (scRNA-seq). It includes five widely used human single-cell transcriptomic datasets spanning diverse tissues and biological contexts:





He: Human embryonic skeletal development (Cell Research, 2021)




Madissoon: Stability of lung, spleen, and esophagus after cold preservation (Genome Biology, 2020)




Stewart: Immune zonation in human kidney (Science, 2019)




Vento: Early maternal–fetal interface reconstruction (Nature, 2018)




Zheng68k: Large-scale profiling of PBMCs using 10x Genomics (Nature Communications, 2017)



These datasets have been preprocessed and harmonized to support evaluation in long-tailed class distribution scenarios and class-incremental learning pipelines.

They are used in our study proposing ZhangCIA (single-cell Long-Tailed Class-Incremental Annotation), a novel framework addressing the challenge of annotating under-represented cell types and incrementally emerging cell classes in scRNA-seq data. The datasets in this collection serve as the experimental foundation for training and evaluating ZhangCIA across diverse biological contexts.

Please cite the original publications when using the datasets:





Jian He et al., Cell Research, 2021.




E. Madissoon et al., Genome Biology, 2020.




Benjamin J. Stewart et al., Science, 2019.




Roser Vento-Tormo et al., Nature, 2018.




G. X. Y. Zheng et al., Nature Communications, 2017.



If you use this dataset in your research, please also cite our work introducing ZhangCIA (citation to be provided upon publication).
DOI: 10.15468/dl.vvvk2r
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AEG5702"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016102-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7tb79w
title: Occurrence Download

description: A dataset containing 302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus rattus",
 "Country is Colombia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 302 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016107-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fpu7vd
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Physaria pallida"
 ]
}

 The dataset includes 57 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016108-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.phbh6p
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Brachypodium flexum, Brachypodium diaphanum, Brachypodium flexum abyssinicum, Brachypodium flexum simplex, Brachypodium flexum tenue, Brachypodium flexum trachycladum, Brachypodium fontanesianum, Brachypodium multiflorum, Brachypodium multiflorum, Brachypodium pubescens)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016109-250711103210423/datasets/export for details.
DOI: 10.15468/dl.gkfhgh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus rattus",
 "Country is Comoros",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016110-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x2kkzv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus rattus",
 "Country is Cook Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016111-250711103210423/datasets/export for details.
DOI: 10.15468/dl.2tbhzd
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ADW5188"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016112-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m2ff35
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidium bipinnatum"
 ]
}

 The dataset includes 14 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016113-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8nxgfr
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cryptophyllium daparo"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016114-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15794239
title: Speech-to-text dataset for keyword spotting applications in the Papiamento language within a healthcare environment

description: This audio dataset accompanies the SISSTEM Bachelor's thesis "Speech-to-text model for keyword spotting applications in the Papiamento language within a healthcare environment" by Joel Rajnherc. It was developed to kick-start the exploration of keyword spotting research for the Papiamento language. The speech_commands dataset heavily inspired it. It currently consists of seven classes, six keywords, and one class for unknowns.

Approximately 280 participants contributed to the dataset, which resulted in 16766 samples after filtering.

What do the instances in this dataset represent?

Each instance represents a one-second-long recording, stored as a spectrogram with 124 frequency bins by 129 time frames. Each sample is stored in the .npz file format. Regarding the target label, there are seven classes in total:




Papiamento
English


Dolor
Pain


Masha danki
Thank you very much


No
No


Resultado
Result


SSIMSAN (designated wake word)
SSIMSAN (designated wake word)


Unknown (auxiliary bucket)
Unknown (auxiliary bucket)




 

Can I reproduce the results easily?

Certainly, we provide a notebook code repository for educational and academic interests here.

Acknowledgements



All the participants who contributed to the data collection!

All the stakeholders, including but not limited to Full Stack Vision Aruba (Raspberry PI Foundation), ImSan, FHTMS, and Esther Plomp from the University of Aruba Research Center.

The thesis supervisor Francis Laclé, co-evaluators Dr. Salys Sultan, Dr. Eric Mijts, and external readers Peter Scholing and John Becker.

A special thank you to Jean-Luc at SISSTEM for providing help with data filtering.