cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.2mrf9u
title: Occurrence Download

description: A dataset containing 5374 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mirafra apiata (Vieillot, 1816)"
 ]
}

 The dataset includes 5374 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0391331-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9sfecy
title: Occurrence Download

description: A dataset listing the 9518 species recorded in GBIF matching the query:
{
 "and" : [
 "IucnRedListCategory is NT",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 9518 records were derived from 7110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0108596-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r3jpim
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Miconia notabilis Triana",
 "Country is Colombia"
 ]
}

 The dataset includes 217 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014966-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s744x6
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacia aurantiaca C.Y.Wu"
 ]
}

 The dataset includes 13 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016992-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wn6ua6
title: Occurrence Download

description: A dataset containing 52944 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((5.275 51.625,5.325 51.625,5.325 51.675,5.275 51.675,5.275 51.625))",
 "DatasetKey is Observation.org, Nature data from around the World",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 52944 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0306015-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6gz2dk
title: Occurrence Download

description: A dataset containing 21362909 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((112.97969 21.4869,123.78266 21.4869,123.78266 33.05362,112.97969 33.05362,112.97969 21.4869))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 21362909 records from 1566 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043916-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9nxden
title: Occurrence Download

description: A dataset containing 6478 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Brazil",
 "Country is Argentina",
 "Country is Paraguay"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Casiornis rufus (Vieillot, 1816)"
 ]
}

 The dataset includes 6478 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0365776-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.crj9wa
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudothelphusa americana de Saussure, 1857"
 ]
}

 The dataset includes 27 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014966-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zxgpyr
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cotula hemisphaerica Wall. ex C.B.Clarke"
 ]
}

 The dataset includes 102 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008977-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.idshsw
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Djamde Wildlife Reserve in Togo: diversity of woody species"
 ]
}

 The dataset includes 126 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023450-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f7tgbb
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maxillopoda",
 "HasCoordinate is true",
 "Country is one of (Croatia)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219812-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cgau4x
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hesperocyparis stephensonii (Jeps.) Bartel"
 ]
}

 The dataset includes 56 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0128494-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.md6faz
title: Occurrence Download

description: A dataset containing 9823 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tremarctos Gervais, 1855"
 ]
}

 The dataset includes 9823 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0199136-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbpnvw
title: Occurrence Download

description: A dataset containing 10888524 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 10888524 records from 2514 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055552-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjqcd2
title: Occurrence Download

description: A dataset containing 3627 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pennisetum polystachion (L.) Schult."
 ]
}

 The dataset includes 3627 records from 140 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025510-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eq8ue5
title: Occurrence Download

description: A dataset containing 6192 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Polygala paniculata L."
 ]
}

 The dataset includes 6192 records from 274 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025511-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qzd4mb
title: Occurrence Download

description: A dataset containing 636 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Physalis ixocarpa Brot. ex Hornem."
 ]
}

 The dataset includes 636 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025512-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cd6q55
title: Occurrence Download

description: A dataset containing 1036 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis uranobates (Lynch, 1991)"
 ]
}

 The dataset includes 1036 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025513-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h2g7md
title: Occurrence Download

description: A dataset containing 14226 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Solanum rostratum Dunal"
 ]
}

 The dataset includes 14226 records from 292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025514-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mzdq76
title: Occurrence Download

description: A dataset containing 2704 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Scinax ruber (Laurenti, 1768)"
 ]
}

 The dataset includes 2704 records from 168 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025515-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amnaj4
title: Occurrence Download

description: A dataset containing 370 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudoboa nigra (Duméril, Bibron & Duméril, 1854)"
 ]
}

 The dataset includes 370 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025516-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27080383
title: Exploring Information Sources on Malaria Preventive Measures and Their Impact on Malaria Prevention Knowledge Among Pregnant Women in an Urban District of Ghana

description: This study aimed to explore the various information sources on malaria preventive measures and assess their impact on the knowledge of malaria prevention among pregnant women in an urban district of Ghana
DOI: 10.6084/m9.figshare.27080383.v1
title: Exploring Information Sources on Malaria Preventive Measures and Their Impact on Malaria Prevention Knowledge Among Pregnant Women in an Urban District of Ghana

description: This study aimed to explore the various information sources on malaria preventive measures and assess their impact on the knowledge of malaria prevention among pregnant women in an urban district of Ghana
DOI: 10.15468/dl.jf7kbh
title: Occurrence Download

description: A dataset containing 3271 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agave salmiana Otto ex Salm-Dyck"
 ]
}

 The dataset includes 3271 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025517-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.21781485
title: Bioinformatics analysis: relationship between adrenocortical carcinoma and KIFs

description: Adrenal cortical cancer has a relatively low incidence, but a dismal 5-year survival rate. Surgical intervention is the gold standard of care today. In spite of this progress, patients continue to have a dismal outlook. The results of this study demonstrate that kinin superfamily (KIF) has strong ties to many different types of cancers. However, their prognostic and immune cell infiltration of adrenocortical carcinoma (ACC) remain unclear. Multiple databases were searched for information on the transcription level of KIFs, its correlation with clinical data of ACC patients, patients’ overall survival (OS), first progression survival (FPS), and progression free interval (PFI). Its role and association with immune cells were also investigated. We observed an increase in the expression of KIF4A, KIF11, KIF20A, and KIF22. There was a strong correlation between them and the advancedness of ACC tumors. Parallel to this, KIFs are connected to the concepts of operating systems, distributed file systems, and partitioned file systems. Similarly, we found five key genes, PRC1, PLK1, KIF23, KIFC1, and KIF5A, through data analysis, all of which participate in multiple cellular pathways. Both KIF4A and KIF11 expression levels were marginally positively correlated with immune infiltration. Because KIF4A, KIF11, KIF20A, and KIF22 are involved in multiple ACC processes and can influence the onset and progression of ACC, they provide a mechanistically grounded framework for diagnosing and managing the disease.
DOI: 10.6084/m9.figshare.21781485.v1
title: Bioinformatics analysis: relationship between adrenocortical carcinoma and KIFs

description: Adrenal cortical cancer has a relatively low incidence, but a dismal 5-year survival rate. Surgical intervention is the gold standard of care today. In spite of this progress, patients continue to have a dismal outlook. The results of this study demonstrate that kinin superfamily (KIF) has strong ties to many different types of cancers. However, their prognostic and immune cell infiltration of adrenocortical carcinoma (ACC) remain unclear. Multiple databases were searched for information on the transcription level of KIFs, its correlation with clinical data of ACC patients, patients’ overall survival (OS), first progression survival (FPS), and progression free interval (PFI). Its role and association with immune cells were also investigated. We observed an increase in the expression of KIF4A, KIF11, KIF20A, and KIF22. There was a strong correlation between them and the advancedness of ACC tumors. Parallel to this, KIFs are connected to the concepts of operating systems, distributed file systems, and partitioned file systems. Similarly, we found five key genes, PRC1, PLK1, KIF23, KIFC1, and KIF5A, through data analysis, all of which participate in multiple cellular pathways. Both KIF4A and KIF11 expression levels were marginally positively correlated with immune infiltration. Because KIF4A, KIF11, KIF20A, and KIF22 are involved in multiple ACC processes and can influence the onset and progression of ACC, they provide a mechanistically grounded framework for diagnosing and managing the disease.
DOI: 10.6084/m9.figshare.21971882
title: Energetic and frustration analysis of SARS-CoV-2 nucleocapsid protein mutations

description: The ongoing COVID-19 spreads worldwide with the ability to evolve in diverse human populations. The nucleocapsid (N) protein is one of the mutational hotspots in the SARS-CoV-2 genome. The N protein is an abundant RNA-binding protein critical for viral genome packaging. It comprises two large domains including the N-terminal domain (NTD) and the C-terminal domain (CTD) linked by the centrally located linker region. Mutations in N protein have been reported to increase the severity of disease by modulating viral transmissibility, replication efficiency as well as virulence properties of the virus in different parts of the world. To study the effect of N protein missense mutations on protein stability, function, and pathogenicity, we analyzed 228 mutations from each domain of N protein. Further, we have studied the effect of mutations on local residual frustration changes in N protein. Out of 228 mutations, 11 mutations were predicted to be deleterious and destabilized. Among these mutations, R32C, R191C, and R203 M mutations fall into disordered regions and show significant change in frustration state. Overall, this work reveals that by altering the energetics and residual frustration, N protein mutations might affect the stability, function, and pathogenicity of the SARS-CoV-2.
DOI: 10.6084/m9.figshare.21971882.v1
title: Energetic and frustration analysis of SARS-CoV-2 nucleocapsid protein mutations

description: The ongoing COVID-19 spreads worldwide with the ability to evolve in diverse human populations. The nucleocapsid (N) protein is one of the mutational hotspots in the SARS-CoV-2 genome. The N protein is an abundant RNA-binding protein critical for viral genome packaging. It comprises two large domains including the N-terminal domain (NTD) and the C-terminal domain (CTD) linked by the centrally located linker region. Mutations in N protein have been reported to increase the severity of disease by modulating viral transmissibility, replication efficiency as well as virulence properties of the virus in different parts of the world. To study the effect of N protein missense mutations on protein stability, function, and pathogenicity, we analyzed 228 mutations from each domain of N protein. Further, we have studied the effect of mutations on local residual frustration changes in N protein. Out of 228 mutations, 11 mutations were predicted to be deleterious and destabilized. Among these mutations, R32C, R191C, and R203 M mutations fall into disordered regions and show significant change in frustration state. Overall, this work reveals that by altering the energetics and residual frustration, N protein mutations might affect the stability, function, and pathogenicity of the SARS-CoV-2.
DOI: 10.6084/m9.figshare.22081467
title: Effects of gross total resection and subtotal resection on survival outcomes of glioma patients: a meta-analysis

description: This study was to conduct a meta-analysis to explore the impact of gross total resection (GTR) and subtotal resection (STR) on survival outcomes in glioma patients. Relevant studies were searched in multiple databases from the available date of inception through 30 December 2021. The weighted mean differences (WMDs), relative risks (RRs), or hazard ratios (HRs) with 95% confidence intervals (CIs) were used to access the effect of GTR versus STR treatments on the outcomes. The histology (low-grade or high-grade) and study population (children and adults) were used for subgroup analysis. Sensitivity analysis was performed for all outcomes. Begg’s test and trim-and-fill method were used for publication bias. Totally 100 studies enrolling 62,129 patients were selected in this meta-analysis. The summary results showed that GTR was superior in improving 1-, 2-, 3-, 5-, 10-, 15-year overall survival (OS), OS time, 1-, 3-, 5-year progression-free survival (PFS), recurrence, local control and seizure control among glioma patients. In addition, high-grade patients who underwent GTR had improvements in 1-, 2- and 3-year OS, OS time, and 1-year PFS, while low-grade patients receiving GTR had improvements in 2-, 5- and 15-year OS, recurrence, seizure control, and tumor progression compared with those receiving STR. GTR was likely to be more effective on survival outcomes than STR among patients with gliomas.
DOI: 10.6084/m9.figshare.22081467.v1
title: Effects of gross total resection and subtotal resection on survival outcomes of glioma patients: a meta-analysis

description: This study was to conduct a meta-analysis to explore the impact of gross total resection (GTR) and subtotal resection (STR) on survival outcomes in glioma patients. Relevant studies were searched in multiple databases from the available date of inception through 30 December 2021. The weighted mean differences (WMDs), relative risks (RRs), or hazard ratios (HRs) with 95% confidence intervals (CIs) were used to access the effect of GTR versus STR treatments on the outcomes. The histology (low-grade or high-grade) and study population (children and adults) were used for subgroup analysis. Sensitivity analysis was performed for all outcomes. Begg’s test and trim-and-fill method were used for publication bias. Totally 100 studies enrolling 62,129 patients were selected in this meta-analysis. The summary results showed that GTR was superior in improving 1-, 2-, 3-, 5-, 10-, 15-year overall survival (OS), OS time, 1-, 3-, 5-year progression-free survival (PFS), recurrence, local control and seizure control among glioma patients. In addition, high-grade patients who underwent GTR had improvements in 1-, 2- and 3-year OS, OS time, and 1-year PFS, while low-grade patients receiving GTR had improvements in 2-, 5- and 15-year OS, recurrence, seizure control, and tumor progression compared with those receiving STR. GTR was likely to be more effective on survival outcomes than STR among patients with gliomas.
DOI: 10.6084/m9.figshare.22139770
title: Maximal clique centrality and bottleneck genes as novel biomarkers in ovarian cancer

description: Ovarian cancer (OC) is second most common form of gynaecological cancer world wide . In this study, we collected and analyzed three ovarian cancer microarray raw datasets from Gene Expression Omnibus, NCBI, and identified a total of 1806 significant DEGs (Differentially expressed genes). The functional analysis of the DEGs showed that the 885 upregulated DEGs were mostly enriched in protein-binding activity, while the downregulated 796 genes were mostly enriched in retinal dehydrogenase activity and GABA receptor binding. We then constructed a protein–protein interaction network of the DEGs DEGs in ovarian cancer datasetsand analyzed the network to find cluster subnets, using molecular complex detection (MCODE). Common genes among top hub gene list, bottleneck gene list and maximum clique centrality (MCC) gene lists were identified as key driver genes, After analyzing the network. The following genes, STK12 (Serine threonine protein kinase), UBE2C (Ubiquitin-conjugating enzyme E2 C), CENPA (Centromere protein A), CCNB1 (Cyclin B1), POLD1 (polymerase delta 1) and KIF11 (Kinesin Family Member 11) were finally identified as driver genes. Higher expression of the key driver genes, STK12, UBE2C, CENPA, CCNB1, POLD1 and KIF11, was associated with lower overall survival (OS) among ovarian cancer patients. Therefore, the identified driver genes could be important diagnostic and prognostic biomarkers for predicting ovarian cancer progression and understanding the mechanism of tumour formation and recurrence.