cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21201173
title: Pars plana vitrectomy combined with pan-retinal photocoagulation, Ahmed glaucoma valve implantation, and/or phacoemulsification for complicated neovascular glaucoma treatment

description: ABSTRACT Purpose: To present long-term results of pars plana vitrectomy combined with pan-retinal endolaser photocoagulation, Ahmed glaucoma valve implantation, and/or phacoemulsification in patients with complicated neovascular glaucoma. Methods: The study comprised 15 eyes from 15 patients with neovascular glaucoma as a complication of diabetic retinopathy and owing to ischemic central retinal vein occlusion. There was a vitreous hemorrhage n all of the patients. Furthermore, 8 of the cases showed varying degrees of hyphema. All subjects received an intravitreal injection of bevacizumab three days before surgery. In 12 phakic patients, phacoemulsification, pars plana vitrectomy, and Ahmed glaucoma valve implantation were performed. Pars plana vitrectomy and Ahmed glaucoma valve implantation were performed in 3 pseudophakic patients. Perioperative and postoperative complications, intraocular pressure values, and best-corrected visual acuity scores were also recorded. Results: The mean follow-up was 24.4 ± 14.56 months. The mean preoperative intraocular pressure was 50.06 ± 7.6 mmHg. At 1 day, 7 days, and 1-, 3-, 6-, 12-month, and last visit following surgery, the mean intraocular pressure was 11.06 ± 8.22, 12.66 ± 7.27, 13.8 ± 7.73, 18.64 ± 7.05, 19.28 ± 4.61, 16.28 ± 1.68, and 16.92 ± 2.12 mmHg, respectively (p=0.001 for every follow-up visit). The mean visual acuity on the most recent appointment was 1.18 ± 0.42 logMar (p=0.001 for each subsequent visit). As postoperative early complications, varying degrees of hyphema and fibrin reactions were recorded. During follow-up, one patient developed phthisis bulbi. In 4 cases, Ahmed glaucoma valve revision surgery was required. Conclusions: In patients with complicated neovascular glaucoma, combined surgical procedures are safe, effective, and preferable both in terms of controlling high intraocular pressure and providing reasonable visual abilities.
DOI: 10.6084/m9.figshare.21201173.v1
title: Pars plana vitrectomy combined with pan-retinal photocoagulation, Ahmed glaucoma valve implantation, and/or phacoemulsification for complicated neovascular glaucoma treatment

description: ABSTRACT Purpose: To present long-term results of pars plana vitrectomy combined with pan-retinal endolaser photocoagulation, Ahmed glaucoma valve implantation, and/or phacoemulsification in patients with complicated neovascular glaucoma. Methods: The study comprised 15 eyes from 15 patients with neovascular glaucoma as a complication of diabetic retinopathy and owing to ischemic central retinal vein occlusion. There was a vitreous hemorrhage n all of the patients. Furthermore, 8 of the cases showed varying degrees of hyphema. All subjects received an intravitreal injection of bevacizumab three days before surgery. In 12 phakic patients, phacoemulsification, pars plana vitrectomy, and Ahmed glaucoma valve implantation were performed. Pars plana vitrectomy and Ahmed glaucoma valve implantation were performed in 3 pseudophakic patients. Perioperative and postoperative complications, intraocular pressure values, and best-corrected visual acuity scores were also recorded. Results: The mean follow-up was 24.4 ± 14.56 months. The mean preoperative intraocular pressure was 50.06 ± 7.6 mmHg. At 1 day, 7 days, and 1-, 3-, 6-, 12-month, and last visit following surgery, the mean intraocular pressure was 11.06 ± 8.22, 12.66 ± 7.27, 13.8 ± 7.73, 18.64 ± 7.05, 19.28 ± 4.61, 16.28 ± 1.68, and 16.92 ± 2.12 mmHg, respectively (p=0.001 for every follow-up visit). The mean visual acuity on the most recent appointment was 1.18 ± 0.42 logMar (p=0.001 for each subsequent visit). As postoperative early complications, varying degrees of hyphema and fibrin reactions were recorded. During follow-up, one patient developed phthisis bulbi. In 4 cases, Ahmed glaucoma valve revision surgery was required. Conclusions: In patients with complicated neovascular glaucoma, combined surgical procedures are safe, effective, and preferable both in terms of controlling high intraocular pressure and providing reasonable visual abilities.
DOI: 10.5281/zenodo.5729265
title: Colorectal Cancer Histology Image Tiles and CycleGAN-based Normalization Model for Tissue Classification

description: <strong>Content</strong> The present dataset is linked to a research aimed at discovering the best normalization pipeline and classification model for colorectal cancer multi-class tissue classification.<br> The 15,856 histological image tiles are completely anomized and are extracted from 10 formalin-fized paraffine-embedded samples of patients affected by colorectal cancer. The materials are split in two folders: “CRC_Tiles_IRCCS_ISTITUTO_TUMORI_BARI.zip”: a zipped folder containing tiles (n=15,856) annotated by a pathologist, grouped in 6 subdirectories, each of them representing a class. Tiles are of size 224 x 224 px, taken at a resolution of 0.5 μm/px.<br> “tcga2tecno.zip”: CycleGAN-based normalization model for colorectal cancer tissue. It has to be used in conjunction with the following repository available on GitHub: https://github.com/junyanz/pytorch-CycleGAN-and-pix2pix. <br> <strong>Ethical Statement</strong> The study has been funded by “Tecnopolo per la Medicina di Precisione (CUP B84I18000540002)”. The institutional Ethic Committee approved the study (Prot n. 780/CE). <br> <strong>Related Datasets and Works</strong><br> <br> For further details concerning the aforementioned dataset, refer to the paper below. <br> Please cite this article if you need this dataset for your research. Altini N. et al. (2021) Multi-class Tissue Classification in Colorectal Cancer with Handcrafted and Deep Features. In: Huang DS., Jo KH., Li J., Gribova V., Bevilacqua V. (eds) Intelligent Computing Theories and Application. ICIC 2021. Lecture Notes in Computer Science, vol 12836. Springer, Cham. https://doi.org/10.1007/978-3-030-84522-3_42 Please also consider the dataset offered in our previous work: Altini N. et al. (2021). Pathologist's Annotated Image Tiles for Multi-Class Tissue Classification in Colorectal Cancer (v1.0) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.4785131
DOI: 10.20375/0000-000f-7418-4
title: Documentation-Data-Collection+Results.pdf
DOI: 10.20375/0000-000f-7419-3
title: Oxf0522.sav
DOI: 10.20375/0000-000f-741a-2
title: Oxf0522.xlsx
DOI: 10.20375/0000-000f-741b-1
title: questionnaire.pdf
DOI: 10.6084/m9.figshare.21201178
title: DLY_50K_012

description: DLY Pigs genotyped by 50K chip
DOI: 10.6084/m9.figshare.16447849
title: Impact of Family-Based Secondary Prevention Programming on Risk, Resilience, and Delinquency: A 6-Month Follow Up within a Randomized Control Trial in Honduras

description: The present study examines the impact of Proponte Más, a family-based, multiple gated prevention program in Honduras. The primary goal of Proponte Más is to reduce the risk factors for problem behavior associated with youth in Honduras through family-based intervention services. At risk youth were randomly assigned to a treatment and control group. Data for the study were sourced primarily from the Behavior Measurement Instrument and FACES IV instrument given to study participants prior to and following programming. Our study finds that Proponte Más succeeded in improving family functioning and decreasing risk factors and increasing protective factors. Our findings pertaining to the impact of the program on delinquency, however, were mixed. Our findings suggest that RCTs and family-based interventions can be effectively carried out in the most violent and at-risk communities in the Western Hemisphere and can result in reduced risk and improved resiliency among at-risk youth.
DOI: 10.6084/m9.figshare.16447849.v1
title: Impact of Family-Based Secondary Prevention Programming on Risk, Resilience, and Delinquency: A 6-Month Follow Up within a Randomized Control Trial in Honduras

description: The present study examines the impact of Proponte Más, a family-based, multiple gated prevention program in Honduras. The primary goal of Proponte Más is to reduce the risk factors for problem behavior associated with youth in Honduras through family-based intervention services. At risk youth were randomly assigned to a treatment and control group. Data for the study were sourced primarily from the Behavior Measurement Instrument and FACES IV instrument given to study participants prior to and following programming. Our study finds that Proponte Más succeeded in improving family functioning and decreasing risk factors and increasing protective factors. Our findings pertaining to the impact of the program on delinquency, however, were mixed. Our findings suggest that RCTs and family-based interventions can be effectively carried out in the most violent and at-risk communities in the Western Hemisphere and can result in reduced risk and improved resiliency among at-risk youth.
DOI: 10.5281/zenodo.6570207
title: Data for submission "SizeShiftReg"

description: Data for NeurIPS submission "SizeShiftReg"
DOI: 10.5281/zenodo.6570206
title: Data for paper "SizeShiftReg" accepted at NeurIPS 2022

description: Data for paper "SizeShiftReg: a Regularization Method for Improving Size-Generalization in Graph Neural Networks", by Davide Buffelli, Pietro Liò, and Fabio Vandin, accepted at NeurIPS 2022.
DOI: 10.5281/zenodo.6990501
title: Data for paper "SizeShiftReg"

description: Data for paper "SizeShiftReg: a Regularization Method for Improving Size-Generalization in Graph Neural Networks"
DOI: 10.5281/zenodo.7109766
title: Data for paper "SizeShiftReg" accepted at NeurIPS 2022

description: Data for paper "SizeShiftReg: a Regularization Method for Improving Size-Generalization in Graph Neural Networks", by Davide Buffelli, Pietro Liò, and Fabio Vandin, accepted at NeurIPS 2022.
DOI: 10.34740/kaggle/dsv/4243551
title: AutoXGB
DOI: 10.5281/zenodo.7021220
title: A High-Resolution Stochastic Modeling Method for Elastic Parameters Based on FDMA

description: Data used in article ‘A High-Resolution Stochastic Modeling Method for Elastic Parameters Based on FDMA’. Including logging data, seismic P-wave velocity data and data of figures in this article.
DOI: 10.5281/zenodo.7021221
title: A High-Resolution Stochastic Modeling Method for Elastic Parameters Based on FDMA

description: Data used in article ‘A High-Resolution Stochastic Modeling Method for Elastic Parameters Based on FDMA’. Including logging data, seismic inversion data of P-wave velocity and data displayed in the figures of the paper.
DOI: 10.5281/zenodo.7109777
title: A High-Resolution Stochastic Modeling Method for Elastic Parameters Based on FDMA

description: Data used in article ‘A High-Resolution Stochastic Modeling Method for Elastic Parameters Based on FDMA’. Including logging data, seismic P-wave velocity data and data of figures in this article.
DOI: 10.17632/c3t7yc2syn.1
title: Local Economic Freedom and Creative Destruction in America

description: This dataset was used in my paper, "Local Economic Freedom and Creative Destruction in America," which is forthcoming in Small Business Economics and is available at https://rdcu.be/bHPLr. The dataset includes quinquennial data for 299 U.S. Metropolitan Statistical Areas over the period 1972-2012. The dataset includes MSA-level variables such as economic freedom, numerous measures of firm/job dynamism, and a variety of economic and demographic characteristics. If you use the dataset, please cite both the dataset and paper as follows: Bennett, Daniel (2019). Local Economic Freedom and Creative Destruction in America, Mendeley Data, V1, http://dx.doi.org/10.17632/c3t7yc2syn.1 Bennett, Daniel L. (2019). Local Economic Freedom and Creative Destruction in America, Small Business Economics.
DOI: 10.18112/openneuro.ds003517.v1.1.0
title: ContinuousVideoGamePlay
DOI: 10.3886/icpsr09030.v1
title: Multnomah County [Oregon] Jury Project, 1973-1976
title: Version 1

description: The Multnomah County, Oregon, Jury Project was conducted as part of the Modeling Jury Decision Project funded by the National Science Foundation. These data represent a census of 32 jury panels that served from July 1973 through March 1976 in the Fourth Circuit Court in Multnomah County (Portland), Oregon. Information was obtained for both six-member and twelve-member juries. Data were collected from official court records, monthly juror panel summaries, and self-administered juror demographic data sheets. Information collected includes members of the jury, their votes, the final verdict, the type of case, the name of the judge, and the amount of time taken by the jury to arrive at a decision, as well as each juror's age, occupation, years of residence in Oregon, educational background, family information, and information on past juries and trials they were involved in. The data include both individual-level juror and aggregate jury case data, with information on 6,657 jurors and 1,159 trials.
description: Datasets: 
 
 DS1: Dataset
description: Although there is information for 6,657 jurors, there are actually a total of 6,892 cases in the data file. The extra 235 cases are dummy cases. Users should see variable 9, CASEFILT, located in column 23 for an explanation regarding these dummy cases.
description: All jury panels in Multnomah County, Oregon, from July 1973 to March 1976.
DOI: 10.5066/f7db809v
title: SPOT Controlled Image Base 10 meter (CIB-10)

description: SPOT Controlled Image Base 10 meter (CIB-10) is a collection of orthorectified panchromatic (grayscale) images. The data were acquired between 1986 and 1993 by the French space agency, Centre National d'Etudes Spatiales (CNES), which owns and operates the SPOT satellite system. The National Geospatial-Intelligence Agency (NGA) acquired this collection of SPOT satellite data for the Imagery for Citizens program, which was designed to provide public and educational access to high quality imagery. The panchromatic images were orthorectified using NGA Digital Terrain Elevation Data Level 1 to remove image distortion and obtain the geometric qualities of a map.
DOI: 10.5281/zenodo.6717378
title: Supplement to Pandemic-Scale Phylogenomics Reveals A Landscape of SARS-CoV2 Recombination

description: Extended Data S1-S2 and Tables S6-S9 corresponding to the publication entitled Pandemic-Scale Phylogenomics Reveals A Landscape of SARS-CoV2 Recombination. Data S1 contains the phylogeny analyzed in the aforementioned study, and Data S2 contains a table of all samples considered to be descendant of a recombinant node in the study, as well as the relevant recombinant node ID. Tables S6-S9 are acknowledgments tables corresponding to GISAID (Table S6), China National Center for Bioinformation (Table S7), COVID-19 Genomics UK (COG-UK) (Table S8), and National Center for Biotechnology Information database (Table S9) on which the study was based.
DOI: 10.6084/m9.figshare.20488218.v2
title: The complete chloroplast genome of Saxifraga saginoides and Saxifraga sessiliflora

description: Two species, Saxifraga saginoides and Saxifraga sessiliflora, were newly collected from Qinghai-Tibet plateau (QTP), China at an altitude of 4,898m in 2021. After a set of process, the data was sequenced on Illumina Novaseq 6000 platform.
DOI: 10.6084/m9.figshare.21155350
title: Supplementary Material for: Identification of Latent Alcohol Use Groups and Transitions over Time Using a 9-Year Follow-Up Study in the Adult General Population

description: <b><i>Introduction:</i></b> Studies investigating latent alcohol use groups and transitions of these groups over time are scarce, while such knowledge could facilitate efficient use of screening and preventive interventions for groups with a high risk of problematic alcohol use. Therefore, the present study examines the characteristics, transitions, and long-term stability of adult alcohol use groups and explores some of the possible predictors of the transitions. <b><i>Methods:</i></b> Data were used from the baseline, 3-, 6-, and 9-year follow-up waves of the Netherlands Mental Health Survey and Incidence Study-2 (NEMESIS-2), a representative study of Dutch adults aged 18–64 at baseline (<i>N</i> = 6,646; number of data points: 20,574). Alcohol consumption, alcohol use disorder (AUD), and mental disorders were assessed with the Composite International Diagnostic Interview 3.0. Latent Markov Modelling was used to identify latent groups based on high average alcohol consumption (HAAC) <i>and</i> AUD and to determine transition patterns of people between groups over time (stayers vs. movers). <b><i>Results:</i></b> The best fitting model resulted in four latent groups: one nonproblematic group (91%): <i>no HAAC</i>, <i>no AUD</i>; and three problematic alcohol use groups (9%): <i>HAAC</i>, <i>no AUD</i> (5%); <i>no HAAC</i>, <i>often AUD</i> (3%); and <i>HAAC and AUD</i> (1%). <i>HAAC</i>, <i>no AUD</i> was associated with a high mean age (55 years) and low educational level (41%), and <i>no HAAC</i>, <i>often AUD</i> with high proportions of males (78%) and people with high educational level (46%). Eighty-seven percent of all respondents – mostly people with <i>no HAAC</i>, <i>no AUD</i> – stayed in their original group during the whole 9-year period. Among movers, people in a problematic alcohol use group (HAAC and/or AUD) mostly transitioned to another problematic alcohol use group and not to the nonproblematic alcohol use group (<i>no HAAC</i>, <i>no AUD</i>). Explorative analyses suggested that lack of physical activity possibly plays a role in transitions both from and to problematic alcohol use groups over time. <b><i>Conclusion:</i></b> The detection of three problematic alcohol use groups – with transitions mostly between the different problematic alcohol use groups and not to the group without alcohol problems – points to the need to explicitly address both alcohol consumption and alcohol-related problems (AUD criteria) in screening measures and interventions in order not to miss and to adequately treat all problematic alcohol users. Moreover, explorative findings suggest that prevention measures should also include physical activity.
DOI: 10.18112/openneuro.ds003846.v1.0.1
title: Prediction Error
DOI: 10.20372/aau_rdr/nzhfni
title: Knowledge, Attitudes, Risky Behavior and Preventive Practices on Sexually Transmitted Diseases among High School Adolescent students in Addis Ababa, Ethiopia

description: Data collected among in-school adolescents in an attempt to assess knowledge, attitudes, risky behavior and preventive practices on sexually transmitted diseases among high school adolescents in Addis Ababa, Ethiopia.
DOI: 10.20372/aau_rdr/nzhfni/sz7xxz
title: Fasil Alene Data.tab

description: Knowledge, Attitudes, Risky Behavior and Preventive Practices on Sexually Transmitted Diseases among High School Adolescent students in Addis Ababa, Ethiopia
DOI: 10.6084/m9.figshare.21201199
title: Data Tables for Water Deposition Rates onto Mars’ South Polar Massive CO2 Ice Deposit (Buhler)

description: Data Tables for: Buhler, P.B.<sup>1</sup>, Water Deposition Rates onto Mars’ South Polar Massive CO2 Ice Deposit. Geophysical Research Journal. <br> <sup>1</sup>Planetary Science Institute; 1700 East Fort Lowell, Suite 106, Tucson, AZ 85719-2395, USA Correspondence e-mail address: pbuhler@psi.edu Version Date: 2022.09.24 <br> I have provided data tables for figures 2-3 and model routine used in Buhler (2022), GRL. <br> <em><strong>Figure 2</strong></em> <br> Data for plotting Fig 2A. is provided in final_fh2o_array.txt and final_zcap_array, which are both 2-dimensional arrays of height 200 and length 510. final_zcap_array.txt provides vertical demarcations in meters of each ice layer at each of the 510 1-kyr timesteps. final_fh2o_array.txt provides fractional H2O ice content (unitless) of each ice layer at each of the 510 1-kyr timesteps. The obliquity (obl_hist.txt; Fig. 2B), accumulation (accum_histR1.txt for Region 1 and accum_histR2.txt; Fig. 2C), eccentricity (ecc_hist.txt; Fig. 2D), longitude of perihelion (lp_hist.txt; Fig. 2E), and insolation (in_hist.txt; Fig. 2F) histories are provided. Each of these text files is 1-dimensional with length 510 (corresponding to 510 1-kyr timesteps) and has units as stated in their respective subplots. <br> <em><strong>Figure 3</strong></em> <br> The data shown in each panel is presented in each Fig3_panel_#.txt file, where # is a number 0-7 corresponding to the panel letters A-H. Each file is an 8x100 2-dimensional array. Row 1 of 8 provides the orbital parameter, with units and range as shown in each subplot. Rows 2-8 of 8 provide the corresponding 3-, 2-, and 1-sigma low, mean, and 1-, 2-, and 3-sigma high results from each model. <br> <em><strong>Model Routine</strong></em> <br> The stratigraphic model is provided in Buhler_2022_stratigraphic_model.txt.
DOI: 10.17632/gw82v2w4dr.1
title: All or none

description: Data for all or none paper
DOI: 10.17632/hj9hmywh9c.1
title: Machine learning for determining lateral flow device results for testing of SARS-CoV-2 infection in a asymptomatic population

description: Validation documentation for training of SARS-CoV-2 machine learning algorithm
DOI: 10.6084/m9.figshare.21201208
title: P.tabuliformis_V1.0.ncRNA.gff3

description: The ncRNA annotation of Chinese pine genome.
DOI: 10.15129/a5c2bb1d-529f-4aef-9941-ee916a99fa5e
title: Data for: "Generation of high-winding-number superfluid circulation in Bose-Einstein condensates"

description: This dataset is associated with the paper: Generation of high-winding-number superfluid circulation in Bose-Einstein condensates Kali E. Wilson, E. Carlo Samson, Zachary L. Newman, and Brian P. Anderson. Accepted for publication in Physical Review A Sept 6, 2022. https://doi.org/10.48550/arXiv.2109.12945 Data contains experimental absorption images of Bose-Einstein condensates in .tiff format. Data contains outputs from numerical simulation of the Gross-Pitaevskii equation in .mat files. Simulations were performed in MATLAB, and MATLAB code is provided to reproduce the relevant figures from the .mat files. See readme file for more detail.
DOI: 10.6084/m9.figshare.21201217
title: Table S1 from Increased superfetation precedes the evolution of advanced degrees of placentotrophy in viviparous fishes of the family Poeciliidae

description: Average values of the matrotrophy index and degree of superfetation for 36 fish species of the family Poeciliidae.
DOI: 10.6084/m9.figshare.21201217.v1
title: Table S1 from Increased superfetation precedes the evolution of advanced degrees of placentotrophy in viviparous fishes of the family Poeciliidae

description: Average values of the matrotrophy index and degree of superfetation for 36 fish species of the family Poeciliidae.
DOI: 10.6084/m9.figshare.21201232.v1
title: R code from Increased superfetation precedes the evolution of advanced degrees of placentotrophy in viviparous fishes of the family Poeciliidae

description: R code to perform mvSLOUCH analyses.
DOI: 10.6084/m9.figshare.21201235
title: Table S2 from Increased superfetation precedes the evolution of advanced degrees of placentotrophy in viviparous fishes of the family Poeciliidae

description: List of non-superfetating species with moderate and extensive placentotrophy that we used to test for robustness of our results.
DOI: 10.6084/m9.figshare.21201235.v1
title: Table S2 from Increased superfetation precedes the evolution of advanced degrees of placentotrophy in viviparous fishes of the family Poeciliidae

description: List of non-superfetating species with moderate and extensive placentotrophy that we used to test for robustness of our results.
DOI: 10.6084/m9.figshare.21201232
title: R code from Increased superfetation precedes the evolution of advanced degrees of placentotrophy in viviparous fishes of the family Poeciliidae

description: R code to perform mvSLOUCH analyses.