cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.9sk2uj
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Bulbonaricus davaoensis"
 ]
}

 The dataset includes 29 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003695-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5967/m0668b3f
title: forecast_20100519150000Z_run001
DOI: 10.5281/zenodo.18404775
title: Exploring Cyber Resilience in Fire Departments - Dataset

description: Anonymous dataset for the paper "Exploring Cyber Resilience in Fire Departments".English files have been translated by DeepL.
DOI: 10.5281/zenodo.18404774
title: Exploring Cyber Resilience in Fire Departments - Dataset

description: Anonymous dataset for the paper "Exploring Cyber Resilience in Fire Departments".English files have been translated by DeepL.
DOI: 10.5061/dryad.4qrfj6qgk
title: Effects of wildlife tourism on white shark associative behaviour

description: While wildlife tourism may impact the animals it targets, it plays a
 critical role in public education and conservation awareness.
 Understanding changes in animal behaviour in response to tourism
 activities can inform the trade-offs between negative impacts and
 socioeconomic benefits. There are public claims that cage-diving
 activities may condition white sharks, Carcharodon carcharias, to interact
 with boats, thus potentially increasing the risk of shark bites. We
 tracked the fine-scale movements of 73 white sharks in relation to
 cage-diving boats using acoustic telemetry between 2018 and 2022 at
 Neptune Islands, Australia, to investigate associative behaviour and
 factors potentially influencing residency and time spent in proximity to
 the cage-diving boats. White sharks spent gradually less time near
 cage-diving boats throughout their residency at the tourism site. This
 behaviour was consistent across individuals, years, sexes and sizes.
 Sharks, however, resumed their natural behaviours (i.e., the initial
 amount of time near the cage-diving boats) each time they returned to
 Neptune Islands, suggesting that the observed habituation (i.e. loss of
 response to the stimulus used to attract sharks) did not last for long
 periods. These trends support the lack of long-term learnt behaviour of
 white sharks increasingly interacting with boats. Our results indicate
 that current management strategies such as regulating the number of days
 the industry can operate at the site and the amount of food-based
 attractant used, and reducing the amount of bait consumed can limit
 associative behaviour between white sharks and boats while enabling
 continued opportunities for white shark tourism. Understanding how
 wildlife associate with humans can help ensure that best practices are in
 place for both the targeted animals and the people involved, particularly
 in the case of threatened and potentially dangerous species.
description: # Effects of wildlife tourism on white shark associative behaviour
 [https://doi.org/10.5061/dryad.4qrfj6qgk](https://doi.org/10.5061/dryad.4qrfj6qgk) # Datasets ## Operators.csv This dataset contains the anchoring locations of the cage-diving operators in the Neptune Islands Marine Park during the study. It also includes their respective times of arrival and departure from the Neptune Islands. ## Shark.csv This dataset contains the white shark fine-scale locations in the Neptune Islands during the study. It contains the tag information, date and time of location, and also the respective IDs (SharkID) used in the study.
DOI: 10.5061/dryad.vdncjsz1z
title: Data on: Projecting spatiotemporal dynamics of severe fever with thrombocytopenia syndrome in the mainland of China

description: This dataset is the data used in the paper of Global change biology
 entitled "Projecting spatiotemporal dynamics of severe fever
 with thrombocytopenia syndrome in the mainland of China". We
 use an integrated multi-model, multi-scenario framework to assess the
 impact of global climate change on SFTS disease in the mainland of China.
 The SFTS incidence in three time periods (2030-2039, 2050-2059, 2080-2089)
 is predicted to be increased as compared to the 2010s in the context of
 various RCPs. The projected spatiotemporal dynamics of SFTS will be
 heterogeneous across provinces. Notably, we predict possible outbreaks in
 Xinjiang and Yunnan in the future, where only sporadic cases have been
 reported previously. These findings highlight the need for
 population awareness of SFTS in endemic regions, and enhanced monitoring
 in potential risk areas. 
description: See the Materials and methods section in the original paper. The
 code used in the statistical analyses are present in the paper and/or the
 Supplementary Materials.
description: # Data on: Projecting spatiotemporal dynamics of severe fever with
 thrombocytopenia syndrome in the mainland of China
 [https://doi.org/10.5061/dryad.vdncjsz1z](https://doi.org/10.5061/dryad.vdncjsz1z) This dataset is the data used in the paper of Global change biology entitled "Projecting spatiotemporal dynamics of severe fever with thrombocytopenia syndrome in the mainland of China". We use an integrated multi-model, multi-scenario framework to assess the impact of global climate change on SFTS disease in the mainland of China. ## Description of the data and file structure The predicted annual incidence of national SFTS cases with or without human population reduction under four RCPs under different climate change scenarios (RCP2.6, RCP4.5, RCP6.0, and RCP8.5) in the 2030s, 2050s, and 2080s. The value represents the annual incidence, and the unit is 10<sup>5</sup>/year. The Dataset-1 file includes the predicted annual incidence of national SFTS cases with a fixed future human population under different climate change scenarios (RCP2.6, RCP4.5, RCP6.0, and RCP8.5) in the 2030s, 2050s, and 2080s. The Dataset-2 file includes the predicted annual incidence of national SFTS cases in the 2030s, 2050s, and 2080s with human population reduction (SSP2) under four RCPs. ## Sharing/Access information Data was derived from the following sources: * https://doi.org/10.1111/gcb.16969
DOI: 10.15468/dl.kebk8j
title: Occurrence Download

description: A dataset listing the 635 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Geometry POLYGON((2.12723 43.36653,2.1125 43.36848,2.10028 43.36403,2.09611 43.34708,2.10111 43.32874,2.13057 43.3154,2.15447 43.33902,2.14808 43.35903,2.12723 43.36653))",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 635 records were derived from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003669-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5wh2dt83
title: MassIVE MSV000100624 - Loss of function variants in SAXO6, encoding a microtubule inner protein of photoreceptor cilia, causes a late-onset retinal dystrophy
title: Over 500 genes have been linked to various forms of inherited retinal diseases (IRDs), a class of Mendelian conditions affecting the survival and function of rod and cone photoreceptors and leading in most instances to progressive visual loss. Yet, some patients still lack a clear genetic diagnosis, suggesting that more disease-associated genes remain to be discovered. Following the genetic analysis of extended cohorts of individuals diagnosed with late-onset recessive retinal dystrophy, we identified biallelic combinations of six predicted null variants in MDM1 (now renamed SAXO6, stabilizer of axonemal microtubules 6) in six subjects from five families. Iterative ultrastructure expansion microscopy coupled with immuno-gold transmission electron microscopy revealed co-localization of SAXO6 with distinct ciliary microtubules from the immotile cilia present in rod and cone photoreceptors in human retina, as well as from the motile cilia present in lung epithelial cells. Cross-linking mass spectrometry uncovered an interaction between SAXO6 and alpha-tubulin, suggesting that SAXO6 is a microtubule inner protein, a component of the cilium that has never previously been linked to IRD. These results identify SAXO proteins in association with a Mendelian condition, highlighting the fundamental role of photoreceptor cilia in the preservation of retinal health.
DOI: 10.25345/c51834g4k
title: MassIVE MSV000100623 - Loss of function variants in SAXO6, encoding a microtubule inner protein of photoreceptor cilia, causes a late-onset retinal dystrophy
title: Over 500 genes have been linked to various forms of inherited retinal diseases (IRDs), a class of Mendelian conditions affecting the survival and function of rod and cone photoreceptors and leading in most instances to progressive visual loss. Yet, some patients still lack a clear genetic diagnosis, suggesting that more disease-associated genes remain to be discovered. Following the genetic analysis of extended cohorts of individuals diagnosed with late-onset recessive retinal dystrophy, we identified biallelic combinations of six predicted null variants in MDM1 (now renamed SAXO6, stabilizer of axonemal microtubules 6) in six subjects from five families. Iterative ultrastructure expansion microscopy coupled with immuno-gold transmission electron microscopy revealed co-localization of SAXO6 with distinct ciliary microtubules from the immotile cilia present in rod and cone photoreceptors in human retina, as well as from the motile cilia present in lung epithelial cells. Cross-linking mass spectrometry uncovered an interaction between SAXO6 and alpha-tubulin, suggesting that SAXO6 is a microtubule inner protein, a component of the cilium that has never previously been linked to IRD. These results identify SAXO proteins in association with a Mendelian condition, highlighting the fundamental role of photoreceptor cilia in the preservation of retinal health.
DOI: 10.5061/dryad.qrfj6q5nh
title: Datasets of 30 freshwater lakes including macroinvertebrate data and explanatory data

description: Understanding the distance-decay relationship (DDR) has been considered
 important because it reflects a combination of several ecological
 processes such as dispersal limitation and environmental sorting. However,
 the effects of human disturbances on DDR are poorly known, especially in
 freshwater lakes. To fill this gap, we used datasets across 30 freshwater
 lakes in the Yangtze River floodplain to examine how anthropogenic
 eutrophication modified the relationships between three facets (taxonomic,
 functional, and phylogenetic) and three measures (overall dissimilarity,
 turnover, and nestedness-resultant components) of macroinvertebrate beta
 diversity and geographic and environmental distances. The datasets include
 macroinvertebrate data and explanatory data in the 30 freshwater lakes.
description: # Datasets of 30 freshwater lakes including macroinvertebrate data and
 explanatory data
 [https://doi.org/10.5061/dryad.qrfj6q5nh](https://doi.org/10.5061/dryad.qrfj6q5nh) In order to examine how anthropogenic eutrophication modified the relationships between three facets (taxonomic, functional, and phylogenetic) of macroinvertebrate beta diversity and geographic and environmental distances across 30 freshwater lakes, we need to obtain basic macroinvertebrate data from 30 freshwater lakes. ## Description of the data and file structure The datasets include macroinvertebrate data and explanatory data in the 30 freshwater lakes. We uploaded a total of 5 datasets. The file "env" contains the environmental data of 30 freshwater lakes, the first column is the name of the lake, and the first row is the environmental factor. The column "area" refers to "lake area" in km². The column "depth" refers to "water depth" in m. The units of total nitrogen (TN), nitrate nitrogen (NO<sub>3-</sub>N), ammonium nitrogen (NH<sub>4-</sub>N), total phosphorus (TP), PO<sub>4-</sub>P, and chemical oxygen demand (CODMn) are "mg/L". The unit of chlorophyll a (Chl a) is "μg/L". The unit of conductivity is "μs/cm". The unit of transparency is "cm". The unit of vegetation coverage is "%". More details can be found in the related article, especially material methods and Table 2. The file "pcnm" is the principal coordinates of neighbour matrix data based on the spatial distances of 30 lakes. The file "species" is the density data of macroinvertebrates in 30 lakes. The file "taxon" is the taxon data of macroinvertebrates. The file "trait" is the functional traits of macroinvertebrates. ## Sharing/Access information The data can only be accessed here. ## Code/Software All analyses of this study were carried out in R.
DOI: 10.25405/data.ncl.30946337
title: Samples and metadata supporting 'Architecture-Based Energy Consumption Dataset'

description: The Architecture-Based Energy Consumption Dataset (ABCD) is a large-scale experimental dataset capturing power, current, and voltage measurements collected during the execution of deep neural network architectures under diverse configurations.The dataset comprises raw per-run measurement files and processed, aggregated summaries that encode architectural topology, training parameters, and derived statistical descriptors of energy-related behaviour. It was generated as part of a PhD thesis at Newcastle University and is intended to support research on energy-aware machine learning, architectural generalisation, and performance prediction for deep neural networks, particularly in resource-constrained or edge-computing contexts.Due to the size of the full dataset, this record provides representative samples and comprehensive metadata. The complete dataset is available in Zenodo via the DOI below, while the supporting code can be accessed in GitHub.
DOI: 10.25405/data.ncl.30946337.v1
title: Samples and metadata supporting 'Architecture-Based Energy Consumption Dataset'

description: The Architecture-Based Energy Consumption Dataset (ABCD) is a large-scale experimental dataset capturing power, current, and voltage measurements collected during the execution of deep neural network architectures under diverse configurations.The dataset comprises raw per-run measurement files and processed, aggregated summaries that encode architectural topology, training parameters, and derived statistical descriptors of energy-related behaviour. It was generated as part of a PhD thesis at Newcastle University and is intended to support research on energy-aware machine learning, architectural generalisation, and performance prediction for deep neural networks, particularly in resource-constrained or edge-computing contexts.Due to the size of the full dataset, this record provides representative samples and comprehensive metadata. The complete dataset is available in Zenodo via the DOI below, while the supporting code can be accessed in GitHub.
DOI: 10.5061/dryad.n5tb2rc29
title: Shoals in troubled waters: Data

description: Rising water temperatures across aquatic habitats, in the current global
 climate change scenario, in freshwater systems, can increase, directly
 affecting metabolism and food intake in fish species. These can
 potentially alter their physiological, behavioural and, potentially
 altering their shoaling properties. In the current study, we examined the
 effects of future temperatures on metabolism, foraging, and shoaling of
 tropical fish. Mixed-species shoals, (comprising flying barbs, zebrafish
 and gambusia) and as well single-species (flying barbs and zebrafish)
 shoals of flying barbs and zebrafish were conditioned for 45 days to one
 of the following three kinds of temperature regimes: the Current
 Temperature Regime (CTR) in which shoals were at 24°C (i.e., the current
 mean temperature of their habitat), The Predicted Temperature Regime (PTR)
 which maintained a water temperature of 31°C, (i.e., simulating conditions
 projected for their habitat in 2100), and The Dynamic Temperature Regime
 (DTR) which experienced daily temperature fluctuations between 24°C and
 31°C, (i.e., resembling rapid temperature changes expected in their
 natural environments) or the Current Temperature Regime (CTR) in which
 shoals were at 24°C, the current mean temperature of their habitat. Our
 results revealed species-specific responses to these temperature regimes.
 Flying barbs exhibited significantly lower body weight at PTR but
 maintained consistent glycogen content across all temperature regimes. In
 contrast, zebrafish and gambusia displayed significantly elevated muscle
 glycogen content at PTR, with similar body weights across all three
 temperature regimes. Bloodworm intake showed there were no significant
 temperature-related changes on feeding behaviour. Cohesion within flying
 barb shoals and cohesion/polarization in mixed-species shoals decreased
 significantly at PTR. Shoals exposed to DTR exhibited intermediate
 characteristics between those conditioned to CTR and PTR, suggesting that
 shoals may be less impacted by dynamic temperatures as compared to
 prolonged high temperatures. This study highlights species-specific
 metabolic responses to future temperatures and their potential
 implications for larger-scale shoal properties. 
description: # Shoals in troubled waters: Data
 [https://doi.org/10.5061/dryad.n5tb2rc29](https://doi.org/10.5061/dryad.n5tb2rc29) ## Description of the data and file structure Each sheet has a separate kind of data (on metabolism or shoaling properties). Units have been mentioned in the column headers. Abbreviations: CTR stands for Current Temperature Regime DTR stands for Dynamic Temperature Regime PTR stands for Predicted Temperature Regime ## Sharing/Access information NA ## Code/Software NA
DOI: 10.5281/zenodo.18404355
title: Input files for Validation of a 3D crustal velocity model for northern Israel using wavefield simulations

description: Be3D.zip contains the par file, interfaces, and 3D tomographic model (Ben-Dor et al., 2025) used by the SPECFEM3D software in Ben-Dor et al., 2026.

Gitt1D.zip contains the par file, interfaces, and 1D velocity model (Gitterman et al., 2025) used by the SPECFEM3D software in Ben-Dor et al., 2026.

CMTSOLUTIONS.zip contains the CMTSOLUTION files used by the SPECFEM3D software in Ben-Dor et al., 2026.

 

Ben‐Dor, G., Kurzon, I., Aizenshtat‐Soffer, E., Wetzler, N., Weinberger, R., Tape, C., & Tsesarsky, M. (2025). Structure and Seismicity of the Dead Sea Fault and the Galilee Revealed by 3D Earthquake Tomography. Journal of Geophysical Research: Solid Earth, 130(7). https://doi.org/10.1029/2024JB030816.

Gitterman, Y., Pinsky, V., Amrat, A.-Q., Jaser, D., Mayyas, O., Nakanishi, K., & Hofstetter, R. (2005). Source features, scaling and location of calibration explosions in Israel and Jordan for CTBT monitoring. Israel Journal of Earth Sciences, 54, 199–217.
DOI: 10.5281/zenodo.18404749
title: Input files for Validation of a 3D crustal velocity model for northern Israel using wavefield simulations

description: Be3D.zip contains the par file, interfaces, and 3D tomographic model (Ben-Dor et al., 2025) used by the SPECFEM3D software in Ben-Dor et al., 2026.

Gitt1D.zip contains the par file, interfaces, and 1D velocity model (Gitterman et al., 2025) used by the SPECFEM3D software in Ben-Dor et al., 2026.

CMTSOLUTIONS.zip contains the CMTSOLUTION files used by the SPECFEM3D software in Ben-Dor et al., 2026.

 

Ben‐Dor, G., Kurzon, I., Aizenshtat‐Soffer, E., Wetzler, N., Weinberger, R., Tape, C., & Tsesarsky, M. (2025). Structure and Seismicity of the Dead Sea Fault and the Galilee Revealed by 3D Earthquake Tomography. Journal of Geophysical Research: Solid Earth, 130(7). https://doi.org/10.1029/2024JB030816.

Gitterman, Y., Pinsky, V., Amrat, A.-Q., Jaser, D., Mayyas, O., Nakanishi, K., & Hofstetter, R. (2005). Source features, scaling and location of calibration explosions in Israel and Jordan for CTBT monitoring. Israel Journal of Earth Sciences, 54, 199–217.
DOI: 10.5061/dryad.rbnzs7hj4
title: Predation impacts by the dominant soft bodied and durophagous predators on temperate intertidal shores

description: Substantial research exists on predation and its ecology. Most research
 has focused on durophagous fish, brachyuran crabs, and lobsters. Data are
 lacking, however, on soft bodied predators like anemones, and their
 contribution to overall levels of predation remains largely unevaluated.
 Here we compared predation rates of the durophagous predator, the crab
 Carcinus maenas and the soft bodied predator, the anemone Actinia equina
 on 15 intertidal shores around Anglesey, north Wales. We employed a novel
 approach to assess predation based on measuring faecal output from
 recently collected individuals and converting to food consumed using
 absorption efficiencies measured using potential prey species inhabiting
 the same shores. Anemone mean abundance was 8.21 (±0.27, s.e.), whereas
 for C. maenas it was 0.23± 0.02. Absorption efficiencies when fed mussel
 tissue, a polychaete worm, or a shrimp were 92.8%-94.0% in C. Maenas and
 40.5%-95.8% in A. equina. This reflected the different feeding modes of
 the two predators. Unexpectedly A. equina consumed 3.5-7 times more prey
 than C. maenas.  The consumption of larger amounts of prey by an
 anemone than the dominant durophagous predator has important consequences
 for calculating energy flows in food webs, understanding predation
 controls in assemblages, and potentially for wider predation trends
description: # Predation impacts by the dominant soft bodied and durophagous predators
 on temperate intertidal shores The file entitled "**Raw data -
 predator abundance and size**" gives data on surveys of numbers of
 anemone and crab predators on 15 beaches around the Isle of Anglesey
 between 22 June and 10 July 2021.  It details the name of the bay, shore
 type, exposure rating (following the method of Lewis (1964)), the number
 of the transect taken at the site, the transect length, the distance
 between quadrats along the transect, the number of the quadrat, whether
 the substratum was underwater (“wet”, typically a pool), or above water
 and hence “dry”, and both the numbers of crabs or anemones present, with
 their sizes, in any given quadrat. The file entitled "**Raw data -
 faecal egestion - final**" provides data on amounts of faeces
 produced by recently collected individuals. It gives the number of the
 aluminium boat that was used to process faeces, the boat weight (g), the
 weight of the boat plus wet faeces (g), and the dry weight and ash weight
 of faeces plus the boat (g). Ash-free dry weight values (g) were
 calculated as the difference between dry and ash weights, and are
 presented as amounts produced by each individual for a period of 7 days
 after collection. It also gives values for the size of each individual
 studied in terms of Wet, dry, ash, and ash-free dry weights, using the
 same methods and terminology as those for faecal production.