cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5667850
title: Contribution of production and seed variables to the genetic divergence in passion fruit under different nutrient availabilities

description: Abstract: The objective of this work was to evaluate the relative contribution of variables related to fruit production and to seed morphophysiological characteristics to the genetic divergence in passion fruit (Passiflora edulis) progenies, aiming at selecting progenies potentially responsive to fertilization. Ten progenies were evaluated under conditions of low (50% of the recommended dose of fertilizers) and high soil fertility (dose 50% higher than the recommended one), regarding variable sets related to production and to the morphological and physiological characteristics of seeds. The association between these sets was determined by the canonical correlation analysis and by the nearest-neighbor clustering method. The nutritional environments interfered in the relative contribution of the variables to the genetic divergence of the progenies. The accelerated aging test of seeds - from the set of seed physiological quality - did not contribute significantly to the selection of genotypes responsive to soil fertilization. The most responsive progenies to the increased availability of nutrients were grouped according to the production variables that were evaluated under high soil fertility. Irrespectively of the evaluated environment, the set of production variables is the one that contributes more expressively to the identification of the genetic divergence of passion fruit progenies.
DOI: 10.6084/m9.figshare.5667850.v1
title: Contribution of production and seed variables to the genetic divergence in passion fruit under different nutrient availabilities

description: Abstract: The objective of this work was to evaluate the relative contribution of variables related to fruit production and to seed morphophysiological characteristics to the genetic divergence in passion fruit (Passiflora edulis) progenies, aiming at selecting progenies potentially responsive to fertilization. Ten progenies were evaluated under conditions of low (50% of the recommended dose of fertilizers) and high soil fertility (dose 50% higher than the recommended one), regarding variable sets related to production and to the morphological and physiological characteristics of seeds. The association between these sets was determined by the canonical correlation analysis and by the nearest-neighbor clustering method. The nutritional environments interfered in the relative contribution of the variables to the genetic divergence of the progenies. The accelerated aging test of seeds - from the set of seed physiological quality - did not contribute significantly to the selection of genotypes responsive to soil fertilization. The most responsive progenies to the increased availability of nutrients were grouped according to the production variables that were evaluated under high soil fertility. Irrespectively of the evaluated environment, the set of production variables is the one that contributes more expressively to the identification of the genetic divergence of passion fruit progenies.
DOI: 10.6084/m9.figshare.5667847
title: Contemporary groups in the genetic evaluation of Nellore cattle using Bayesian inference

description: Abstract: The objective of this work was to evaluate the criteria for the formation of contemporary groups (CGs) in the genetic evaluation of body weight at weaning in Nellore cattle. A total of 713,474 records from 3,066 herds located in Midwestern and Northern Brazil were used. Data were obtained from the genealogical registry of zebu breeds of the Brazilian association of zebu breeders. Data structures were defined based on the number of standard deviations (SDs) for outlier removal (±2.0, ±2.5, ±3.0, and ±3.5) and on the minimal number of animals per CG (3, 7, and 15). Genetic evaluation was performed with an animal model using Bayesian inference. Data structures with ±3.5 SDs and CG with at least 15 animals presented the highest additive genetic variance (82.65±2.93), and those with ±2.0 SDs and CG with at least 3 animals showed the lowest one (60.23±1.96). The proper formation of CGs results in better-quality data archives, allowing to obtain more trustable estimates for the genetic parameters. Better selection responses are obtained when the following criteria are adopted for the removal of outliers: 2.5, 3.0, and 3.5 standard deviations and a minimum of 15 animals per contemporary group.
DOI: 10.6084/m9.figshare.5667847.v1
title: Contemporary groups in the genetic evaluation of Nellore cattle using Bayesian inference

description: Abstract: The objective of this work was to evaluate the criteria for the formation of contemporary groups (CGs) in the genetic evaluation of body weight at weaning in Nellore cattle. A total of 713,474 records from 3,066 herds located in Midwestern and Northern Brazil were used. Data were obtained from the genealogical registry of zebu breeds of the Brazilian association of zebu breeders. Data structures were defined based on the number of standard deviations (SDs) for outlier removal (±2.0, ±2.5, ±3.0, and ±3.5) and on the minimal number of animals per CG (3, 7, and 15). Genetic evaluation was performed with an animal model using Bayesian inference. Data structures with ±3.5 SDs and CG with at least 15 animals presented the highest additive genetic variance (82.65±2.93), and those with ±2.0 SDs and CG with at least 3 animals showed the lowest one (60.23±1.96). The proper formation of CGs results in better-quality data archives, allowing to obtain more trustable estimates for the genetic parameters. Better selection responses are obtained when the following criteria are adopted for the removal of outliers: 2.5, 3.0, and 3.5 standard deviations and a minimum of 15 animals per contemporary group.
DOI: 10.6084/m9.figshare.5667844
title: Intra- and intergenomic chromosomal pairing in artificially polyploidized elephant grass and pearl millet hybrids

description: Abstract: The objective of this work was to evaluate, by genomic in situ hybridization (GISH), pairing configurations as potential indicators of recombination between chromosomes of different parental genomes, in two interspecific hybrids (elephant grass x pearl millet) artificially polyploidized. Anthers from young flower buds were used in the chromosomal preparations. The genomic probe was prepared with pearl millet DNA and labeled with biotin-16-dUTP by the nick translation reaction. Blocking DNA was prepared with genomic elephant grass DNA. The homoeologous intergenomic pairing, observed in the two hybrids, indicates the possibility of recombination between chromosomes of the parental genomes.
DOI: 10.6084/m9.figshare.5667844.v1
title: Intra- and intergenomic chromosomal pairing in artificially polyploidized elephant grass and pearl millet hybrids

description: Abstract: The objective of this work was to evaluate, by genomic in situ hybridization (GISH), pairing configurations as potential indicators of recombination between chromosomes of different parental genomes, in two interspecific hybrids (elephant grass x pearl millet) artificially polyploidized. Anthers from young flower buds were used in the chromosomal preparations. The genomic probe was prepared with pearl millet DNA and labeled with biotin-16-dUTP by the nick translation reaction. Blocking DNA was prepared with genomic elephant grass DNA. The homoeologous intergenomic pairing, observed in the two hybrids, indicates the possibility of recombination between chromosomes of the parental genomes.
DOI: 10.6084/m9.figshare.5667838
title: Impact of farm size on milk quality in the Brazilian dairy industry according to the seasons of the year

description: ABSTRACT: Milk produced in Brazil has been seen as having poor quality and is associated with a large number of small farms. However, there are few studies demonstrating lower quality of milk of small properties. Thus, this study aimed to evaluate the relationship between production scale on dairy farms and milk quality, how it behaviors throughout the year and set goals to improve quality according to each strata. A total of 21,917 analysis of 409 farmers conducted from January 2005 to December 2014 were used. To study the database, the properties were divided according to monthly average daily milk yield: 10 to 100; 100 to 200; 200 to 500; 500 to 1,000; and 1,000 to 5,000L of milk day-1. The data showed that dairy farming is predominantly carried out on small-scale production properties; however, the highest volumes are produced by a small number of producers. Additional data reveals that milk quality can vary because of distinct factors as nutritional condition and feed supply. Quality of the milk produced should be a matter of concern for the entire milk-production chain, because it still has problems such as high total bacterial count, high somatic cell count and low solids.
DOI: 10.6084/m9.figshare.5667838.v1
title: Impact of farm size on milk quality in the Brazilian dairy industry according to the seasons of the year

description: ABSTRACT: Milk produced in Brazil has been seen as having poor quality and is associated with a large number of small farms. However, there are few studies demonstrating lower quality of milk of small properties. Thus, this study aimed to evaluate the relationship between production scale on dairy farms and milk quality, how it behaviors throughout the year and set goals to improve quality according to each strata. A total of 21,917 analysis of 409 farmers conducted from January 2005 to December 2014 were used. To study the database, the properties were divided according to monthly average daily milk yield: 10 to 100; 100 to 200; 200 to 500; 500 to 1,000; and 1,000 to 5,000L of milk day-1. The data showed that dairy farming is predominantly carried out on small-scale production properties; however, the highest volumes are produced by a small number of producers. Additional data reveals that milk quality can vary because of distinct factors as nutritional condition and feed supply. Quality of the milk produced should be a matter of concern for the entire milk-production chain, because it still has problems such as high total bacterial count, high somatic cell count and low solids.
DOI: 10.6084/m9.figshare.5667835
title: Association of the protein tyrosine phosphatase non-receptor 22 polymorphism (PTPN22) with endometriosis: a meta-analysis

description: ABSTRACT Objective To evaluate PTPN22 C1858T polymorphism and the risk of endometriosis. Methods A meta-analysis of 10 published case-control studies (from four articles), with a total sample of 971 cases and 1,181 controls, was performed. We estimated risk (odds ratio and 95% confidence intervals) of endometriosis associations with the C1858T polymorphism. Results A significant increased risk in all genetic models of the variant T allele with endometriosis (odds ratio: 3.14-5.55; p&lt;0.00001-0.002) was found. The analysis without the study whose controls deviated from the Hardy-Weinberg equilibrium exacerbated these effects in the homozygous and recessive models (odds ratio: 7.19-9.45; p&lt;0.00001-0.0002). In the Italian subgroup, a significant risk association was found in the homozygous and recessive models (odds ratio: 8.72-11.12; p=0.002). Conclusion The associations observed between PTPN22 (C1858T) and the risk of endometriosis suggest this polymorphism might be a useful susceptibility marker for this disease.
DOI: 10.6084/m9.figshare.5667835.v1
title: Association of the protein tyrosine phosphatase non-receptor 22 polymorphism (PTPN22) with endometriosis: a meta-analysis

description: ABSTRACT Objective To evaluate PTPN22 C1858T polymorphism and the risk of endometriosis. Methods A meta-analysis of 10 published case-control studies (from four articles), with a total sample of 971 cases and 1,181 controls, was performed. We estimated risk (odds ratio and 95% confidence intervals) of endometriosis associations with the C1858T polymorphism. Results A significant increased risk in all genetic models of the variant T allele with endometriosis (odds ratio: 3.14-5.55; p&lt;0.00001-0.002) was found. The analysis without the study whose controls deviated from the Hardy-Weinberg equilibrium exacerbated these effects in the homozygous and recessive models (odds ratio: 7.19-9.45; p&lt;0.00001-0.0002). In the Italian subgroup, a significant risk association was found in the homozygous and recessive models (odds ratio: 8.72-11.12; p=0.002). Conclusion The associations observed between PTPN22 (C1858T) and the risk of endometriosis suggest this polymorphism might be a useful susceptibility marker for this disease.
DOI: 10.6084/m9.figshare.5667832
title: In vitro effect of amorphous calcium phosphate paste applied for extended periods of time on enamel remineralization

description: Abstract Dental applications based on the unique characteristics of amorphous calcium phosphate stabilized by casein phosphopeptides (CPP-ACP) have been proposed, as well as the improvement of its properties. Objectives: The objective of this study was to determine the ability of topically applied CPP-ACP from a commercial product to remineralize subsurface lesions when applied for extended periods of time (3 h and 8 h). Material and Methods: Artificially induced carious lesions were produced in 50 bovine enamel blocks previously selected by surface hardness. After treatments with gel without F and CPP-ACP applied for 1 minute (Placebo); 2% NaF neutral gel applied for 1 minute (Fluoride 1 min); CPP-ACP applied for 3 min (ACP 3 min); and CPP-ACP applied for 3 h (ACP 3 h) and for 8 h (ACP 8 h), the enamel blocks were submitted to the remineralization pH-cycling. Surface hardness and synchrotron micro-tomography were used to determine the percentage of surface hardness recovery (%SHR) and to calculate mineral concentration (gHAp.cm−3), respectively. The data were submitted to ANOVA followed by the Student-Newman-Keuls test (p&lt;0.05). Results: Fluoride gel presented higher %SHR followed by ACP 3 min (p&lt;0.001). No difference (p = 0.148) was found for Placebo, ACP 3 h and ACP 8 h groups for %SHR. Fluoride gel showed greater mineral concentration (p&lt;0.001) when compared with the other groups. ACP 3 min demonstrated a significant difference (p&lt;0.001) from ACP 3 h and ACP 8 h. The ACP 3 h and 8 h presented a subsurface lesion with development of laminations in all blocks. Conclusion: In this in vitro study the use of CPP-ACP for extended periods of time did not produce an additive effect in the remineralization process.
DOI: 10.6084/m9.figshare.5667832.v1
title: In vitro effect of amorphous calcium phosphate paste applied for extended periods of time on enamel remineralization

description: Abstract Dental applications based on the unique characteristics of amorphous calcium phosphate stabilized by casein phosphopeptides (CPP-ACP) have been proposed, as well as the improvement of its properties. Objectives: The objective of this study was to determine the ability of topically applied CPP-ACP from a commercial product to remineralize subsurface lesions when applied for extended periods of time (3 h and 8 h). Material and Methods: Artificially induced carious lesions were produced in 50 bovine enamel blocks previously selected by surface hardness. After treatments with gel without F and CPP-ACP applied for 1 minute (Placebo); 2% NaF neutral gel applied for 1 minute (Fluoride 1 min); CPP-ACP applied for 3 min (ACP 3 min); and CPP-ACP applied for 3 h (ACP 3 h) and for 8 h (ACP 8 h), the enamel blocks were submitted to the remineralization pH-cycling. Surface hardness and synchrotron micro-tomography were used to determine the percentage of surface hardness recovery (%SHR) and to calculate mineral concentration (gHAp.cm−3), respectively. The data were submitted to ANOVA followed by the Student-Newman-Keuls test (p&lt;0.05). Results: Fluoride gel presented higher %SHR followed by ACP 3 min (p&lt;0.001). No difference (p = 0.148) was found for Placebo, ACP 3 h and ACP 8 h groups for %SHR. Fluoride gel showed greater mineral concentration (p&lt;0.001) when compared with the other groups. ACP 3 min demonstrated a significant difference (p&lt;0.001) from ACP 3 h and ACP 8 h. The ACP 3 h and 8 h presented a subsurface lesion with development of laminations in all blocks. Conclusion: In this in vitro study the use of CPP-ACP for extended periods of time did not produce an additive effect in the remineralization process.
DOI: 10.6084/m9.figshare.5667826
title: MICRONUTRIENT CONCENTRATION AND CONTENT IN PASSION FRUIT LEAVES UNDER SAMPLING METHODS AND N-K FERTILIZATION RATES

description: ABSTRACT Balanced uptake of micronutrients by the passion fruit plant is essential for increased production and fruit quality. However, similar fertilizer management in varieties with different productive capacities and high levels of nitrogen and potassium can cause nutritional disorders in plants. The objective of this study was to evaluate leaf micronutrient concentrations and contents in passion fruit as affected by two different sampling methods, different N-K fertilization proportions, and different cultivars. The study was conducted in a randomized block design, with three replications, following a 4 × 6 factorial arrangement consisting of four cultivars of yellow passion fruit (BRS Gigante Amarelo, IAC 275, BRS Ouro Vermelho, and BRS Sol do Cerrado) and six application rates ofN-K2O fertilizer (0-0, 50-125, 100-250, 150-375, 200-500, and 250-625 kg ha-1 year-1). Two leaf sampling methods (leaf located at a position adjacent to the fruit, and leaf located at the end of the fruit-bearing branch) were adopted for nutritional assessment. At 240 days after planting passion fruit seedlings in the experimental area, 20 leaves per plot were sampled. Higher accumulated micronutrient contents were obtained in the adjacent leaves, possibly because of greater leaf weight (more fully developed leaf) compared to the standard leaf. The cultivar IAC 275 had lower concentration and content of Cu, Fe, e Mn in the adjacent leaf, indicating variations in the levels of micronutrients among the cultivars and different micronutrient demands by the cultivars studied. N and K fertilization had less effect on leaf micronutrient concentration and content, but the Zn concentration and content decreased in the standard leaf of the BRS Gigante Amarelo cultivar, and Cu decreased in the standard leaf of the BRS Ouro Vermelho cultivar.
DOI: 10.6084/m9.figshare.5667826.v1
title: MICRONUTRIENT CONCENTRATION AND CONTENT IN PASSION FRUIT LEAVES UNDER SAMPLING METHODS AND N-K FERTILIZATION RATES

description: ABSTRACT Balanced uptake of micronutrients by the passion fruit plant is essential for increased production and fruit quality. However, similar fertilizer management in varieties with different productive capacities and high levels of nitrogen and potassium can cause nutritional disorders in plants. The objective of this study was to evaluate leaf micronutrient concentrations and contents in passion fruit as affected by two different sampling methods, different N-K fertilization proportions, and different cultivars. The study was conducted in a randomized block design, with three replications, following a 4 × 6 factorial arrangement consisting of four cultivars of yellow passion fruit (BRS Gigante Amarelo, IAC 275, BRS Ouro Vermelho, and BRS Sol do Cerrado) and six application rates ofN-K2O fertilizer (0-0, 50-125, 100-250, 150-375, 200-500, and 250-625 kg ha-1 year-1). Two leaf sampling methods (leaf located at a position adjacent to the fruit, and leaf located at the end of the fruit-bearing branch) were adopted for nutritional assessment. At 240 days after planting passion fruit seedlings in the experimental area, 20 leaves per plot were sampled. Higher accumulated micronutrient contents were obtained in the adjacent leaves, possibly because of greater leaf weight (more fully developed leaf) compared to the standard leaf. The cultivar IAC 275 had lower concentration and content of Cu, Fe, e Mn in the adjacent leaf, indicating variations in the levels of micronutrients among the cultivars and different micronutrient demands by the cultivars studied. N and K fertilization had less effect on leaf micronutrient concentration and content, but the Zn concentration and content decreased in the standard leaf of the BRS Gigante Amarelo cultivar, and Cu decreased in the standard leaf of the BRS Ouro Vermelho cultivar.
DOI: 10.6084/m9.figshare.5667823
title: Effects of backpack loads and positions on the variability of gait spatiotemporal parameters in young adults

description: Abstract Introduction: People carry backpacks of different weight in different positions every day. The effects of backpack wearing under different loads and positions were assessed according to the gait’s spatiotemporal parameters and their variability in young adults. Methods Twenty-one subjects performed trials of 4 min in the conditions: control condition with no backpack; bilateral back load consisting of 10% body weight (BW); bilateral back load of 20% BW (B20); unilateral load of 10% BW; unilateral load with 20% BW (U20); bilateral frontal load with 10% BW; bilateral frontal load with 20% BW. Results Step length (SL) and step frequency (SF) show that frontal conditions differed from others as seen in B20. Gait cycle phases showed an increase in the B20 condition for double stance phase and stance phase, swing phase presented reduction in the B20 condition. There were significant main effects in position for SL, SF, and walk ratio, in load only for stride width. The highest variability of spatiotemporal parameters occurred in the U20 condition. All load conditions with 20% BW showed a greater variability when compared to the 10% BW counterpart. Conclusion We concluded that young adults can cope with up to a 15% BW load under a bilateral back position, but in the frontal position not even a 10% BW load was proven to be a safe limit. 20% BW loads should be avoided in any position. These recommendations may assure increased gait stability, decreased trunk forward lean and decreased muscle activation and fatigue reducing back pain occurrence.
DOI: 10.6084/m9.figshare.5667823.v1
title: Effects of backpack loads and positions on the variability of gait spatiotemporal parameters in young adults

description: Abstract Introduction: People carry backpacks of different weight in different positions every day. The effects of backpack wearing under different loads and positions were assessed according to the gait’s spatiotemporal parameters and their variability in young adults. Methods Twenty-one subjects performed trials of 4 min in the conditions: control condition with no backpack; bilateral back load consisting of 10% body weight (BW); bilateral back load of 20% BW (B20); unilateral load of 10% BW; unilateral load with 20% BW (U20); bilateral frontal load with 10% BW; bilateral frontal load with 20% BW. Results Step length (SL) and step frequency (SF) show that frontal conditions differed from others as seen in B20. Gait cycle phases showed an increase in the B20 condition for double stance phase and stance phase, swing phase presented reduction in the B20 condition. There were significant main effects in position for SL, SF, and walk ratio, in load only for stride width. The highest variability of spatiotemporal parameters occurred in the U20 condition. All load conditions with 20% BW showed a greater variability when compared to the 10% BW counterpart. Conclusion We concluded that young adults can cope with up to a 15% BW load under a bilateral back position, but in the frontal position not even a 10% BW load was proven to be a safe limit. 20% BW loads should be avoided in any position. These recommendations may assure increased gait stability, decreased trunk forward lean and decreased muscle activation and fatigue reducing back pain occurrence.