cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/67b55dncm7.1
title: Systemic and mucosal concentrations of nine cytokines among individuals with Neisseria gonorrhoeae infection in Nairobi, Kenya

description: We conducted a cross-sectional comparative study of consecutive adults, 18 to 49 years, seeking treatment for sexually transmitted infections at Casino Special Treatment Centre (STC) Health Centre in Nairobi, Kenya. Patients were included if they were between 18 and 49 years and provided written informed consent to participate in the study. 
An interviewer-administered questionnaire was used to collect the sociodemographic characteristics and the sexual history. 
Vaginal samples were collected after insertion of a speculum. For detection of Neisseria gonorrhoeae infection, a dacron swab was placed approximately 2cm into the os and rotated three times, removed and placed into an empty tube and immediately placed on ice. Cervicovaginal lavage (CVL) was collected for mucosal cytokines. Briefly, the cervix and the lateral vaginal walls were flushed with 10 ml normal saline at room temperature. The fluid was allowed to pool into the posterior fornix and aspirated into the same syringe. This procedure was repeated 3-5 times with the same fluid. The fluid was then collected and placed in a 15ml falcon tube and immediately placed on ice to await transportation, up to 4 hours. 
Urethral samples were collected by gently inserting  dacron swabs 2-4 cm inside the urethra and rotating three times. They were then carefully removed and placed (i) into an empty tube for detection of  Neisseria gonorrhoeae infection and (ii) in a tube containing 1.5ml phosphate buffered saline (PBS) for mucosal cytokine analysis. The tubes were immediately placed on ice to await transportation.
For systemic cytokine analysis, 10mls of venous blood was collected, from all participants, into EDTA treated tubes and then immediately placed on ice to await transportation. 
All participants were tested for HIV using Determine HIV Rapid Test (Abbott Diagnostics) with confirmatory testing being done with the First Response™ (Premier Medical Corporation Private Ltd., Gujarat, India), according to Kenya’s Ministry of Heath guidelines.  Those who tested negative with the first test were considered HIV negative while those who tested positive with the confirmatory test were considered HIV positive and were either enrolled in the Casino H/C HIV comprehensive care clinic (CCC) or referred to a health facility of their choice for follow-up.
Screening for Neisseria gonorrhoeae, Chlamydia trachomatis, Trichomonas vaginalis and Mycoplasma genitalium was done using Multiplex PCR (Sacace Biotechnologies, Como, Italy) according to the manufacturer’s instructions.
The systemic and mucosal levels of 9 cytokines (IL-1, IL-2, IL-4, IL-6, IL-10, IL-12p70, IL-17A, TNF- and IFN-) were measured using the Invitrogen™ High Sensitivity 9-Plex Human ProcartaPlex™ Panel (Thermo Fisher Scientific Inc.)
DOI: 10.17632/dp5mzdgn7f.1
title: Overgrazing, not haying, decreases grassland topsoil organic carbon by decreasing plant species richness along an aridity gradient in Northern China

description: We examine how plant species richness, plant biomass, and soil C concentrations respond to a spatial gradient of aridity and land-use at 701 sites across China. We hypothesized that (1) aboveground biomass and SOC would increase with increasing plant species richness, and species richness would have greater effects in arid regions, (2) aridity and land-use (grazing and haying) will reduce plant diversity and consequently decrease aboveground biomass and SOC.
  Over the period of the three summers (during the season of peak biomass, from late July to early August) of 2013-2015, a total of 701 field sites were surveyed across this region. At each site, one large plot (50 m × 50 m) was established and five quadrats (0.5 m × 0.5 m) were selected within each large plot (located at the center and corners along a diagonal line within the plot). Vegetation was sampled in each quadrat, and all vascular plant species and their cover and density were recorded. All the plants in each quadrat were clipped to ground level, oven-dried to constant weight at 65°C for 48 h, and then weighed in the laboratory to calculate aboveground biomass. Species richness was defined as the sum of distinct species in the five quadrats per plot. Soil samples were collected from three randomly assigned quadrats at each site, and a composite sample consisting of these three soil cores (3-cm diameter, 10-cm depth) was collected from each quadrat (carefully removing the surface organic materials). After field collection, soil samples were taken to the laboratory, sieved, air-dried for one month, and stored for laboratory analyses. Soil organic carbon (SOC) was determined with a total organic C analyzer (vario Toc, Elementar, Germany). The aridity index (AI, the ratio of precipitation to potential evapotranspiration) of each site was calculated using data from WorldClim (https://worldclim.org/) (Hijmans et al. 2005), including annual mean precipitation and temperature.
We found that aridity and grazing reduced SOC through decreasing plant species richness, but did not significantly affect above-ground biomass. Notably, we observed strong negative synergistic effects of aridity and grazing, suggesting that soil carbon content was particularly threatened by grazing in arid environments. By contrast, haying reduced above-ground biomass and had no significant effect on SOC, although it increased plant species richness. Plant species richness had greater positive effects on SOC than on above-ground biomass, and its effects became stronger in more arid regions.
DOI: 10.17632/txt7b8235x.2
title: Dataset for "Improving rainfall-runoff model reliability under non-stationarity of model parameters – a hypothesis testing based framework"

description: This dataset includes all code used to run the hypotheses testing based framework to trade space-for-time presented in 'Improving rainfall-runoff model relaiability under non-stationarity of model parameters - a hypothesis testing based framework'

The code is divided into steps in the sequence Step_A_CreateDataset, Step_B_ModelCalibration, and Step_C_Experimental_TSFT_Approaches

Each step has a separate readme file describing code in the subfolder. 
Step_A reads data from the Newman et al. (2015) dataset (stored in LSHD_Database), performs data checks, and selects the watersheds used for subsequent analysis.
Step_B calibrates the rainfall-runoff model (stored in Model_And_Processed_DataFiles) to the selected watersheds
Finally, Step_C applies all the experimental TSFT hypothese attempted for 3 biome transitioning watersheds.

Sample raw input files from the Newman et al. (2015) dataset, all processed input files, and sample simulation outputs are included in the dataset.
Note: All outputs pertaining to the biome changing watersheds are included.
DOI: 10.17632/vyhnz7hjf2.1
title: data for "How Does Uncertainty Evoke Anxiety: the Mediation Role of Mastery"

description: Mastery mediates the effect of IU on state anxiety based on three experiments.
DOI: 10.17632/7rhz66hwfw.1
title: Assessing positive and negative valence systems to refine animal models of bipolar disorders: the example of GBR 12909-induced manic phenotype

description: Data from the manuscript "Assessing positive and negative valence systems to refine animal models of bipolar disorders: the example of GBR 12909-induced manic phenotype"
DOI: 10.48370/ofd/dt7cjb/dlwfv9
title: Zemelka Krzysztof Piotr.pdf

description: :unav
DOI: 10.48370/ofd/dt7cjb
title: Zachowanie cennych zasobów genowych metodą inwentaryzacji najstarszych drzew na terenie Nadleśnictwa Rajgród

description: Promotor: Adolf F. Korczyk
DOI: 10.17632/6m9xsj5t35.1
title: Real time quantification data

description: Real time quantification data obtained from T24 cell line treated with lavender and eucalyptus essential oils for 6 and 24 hours. Before the addition of essential oils , TNFalpha was used as a pre-treating agent for inducing inflammation.
DOI: 10.48370/ofd/i07ysa
title: Hymenochaete tabacina (Sowerby) Lév., 609

description: Fungarium Macromycetes
DOI: 10.17632/pdzr5cdzyf.1
title: LDHU3_09.0040

description: hypothetical protein - conserved
Leishmania donovani (HU3 strain)
DOI: 10.6084/m9.figshare.19251839
title: Table 1: Qualitative evaluation of articles using the CONSORT checklist

description: <b>Table 1: Qualitative evaluation of articles using the CONSORT checklist</b><b></b>
DOI: 10.6084/m9.figshare.19251839.v2
title: Table 1: Qualitative evaluation of articles using the CONSORT checklist

description: <b>Table 1: Qualitative evaluation of articles using the CONSORT checklist</b><b></b>
DOI: 10.6084/m9.figshare.19251839.v1
title: Table 1: Qualitative evaluation of articles using the CONSORT checklist

description: <b>Table 1: Qualitative evaluation of articles using the CONSORT checklist</b><b></b>
DOI: 10.17632/ndbzfznc2p.1
title: LDHU3_09.0030

description: NSA1
Leishmania donovani (HU3 strain)
DOI: 10.17632/xmpzzjzcsw.1
title: LDHU3_09.0080

description: N-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase | GPI12
Leishmania donovani (HU3 strain)
DOI: 10.17632/3yb7mhxtyf.1
title: An adaptable indexing pipeline for enriching meta information of datasets from heterogeneous repositories

description: Dataset repositories publish a significant number of datasets continuously within the context of a variety of domains, such as biodiversity and oceanography. To conduct multidisciplinary research, scientists and practitioners must discover datasets from various disciplines unfamiliar with them. Well-known search engines, such as Google dataset and Mendeley data, try to support researchers with cross-domain dataset discovery based on their contents. However, as datasets typically contain scientific observations or collected data from service providers, their contextual information is limited. Accordingly, effective dataset indexing can be impossible to increase the Findability, Accessibility, Interoperability, and Reusability (FAIRness) based on their contextual information. This paper presents an indexing pipeline to extend contextual information of datasets based on their scientific domains by using topic modeling and a set of suggested rules and domain keywords (such as essential variables in environment science)  based on domain experts' suggestions. The pipeline relies on an open ecosystem, where dataset providers publish semantically enhanced metadata on their data repositories. We aggregate, normalize, and reconcile such metadata, providing a dataset search engine that enables research communities to find, access, integrate, and reuse datasets. We evaluated our approach on a manually created gold standard and a user study.
DOI: 10.17632/6dts7krvcd.1
title: LDHU3_08.1660

description: beta tubulin
Leishmania donovani (HU3 strain)
DOI: 10.17632/v25np8ntfk.1
title: Supplementary table : Incidence of childhood-onset vitiligo and increased risk of atopic dermatitis, autoimmune diseases, and psoriasis: A nationwide population-based study.

description: Supplementary table 1. Demographic characteristics of the study population.
Supplementary table 2. Incidence of childhood-onset vitiligo in the Korean population aged 0-12 years.
Supplementary table 3. Stratified analysis by sex of the associations between childhood-onset vitiligo and allergic/autoimmune diseases
DOI: 10.17632/g8wmzv7d7c.1
title: Does Fintech influence corporate R&D investment: Evidence from China

description: This study examines the influence of financial technology (Fintech) on corporate R&D investment. Taking 3335 Chinese listed companies in 31 provinces for the years 2012-2019 as a sample, we find that Fintech can significantly stimulate corporate R&D investment. Furthermore, the empirical results indicate that the positive impact of Fintech on corporate R&D investment is more pronounced for firms less accessible to finance in China including Non-SOEs, Non-SOEs without political connections and firms with higher financing constraints. The results of heterogeneity tests provide further evidence for enhanced equal access to finance through Fintech. Our results are confirmed through a variety of robustness tests.
DOI: 10.17632/999vfkhjkz.1
title: Data

description: Near-surface (10 m) wind speed (NWS) plays a crucial role in many areas, including the hydrological cycle, wind energy production, and the dispersion of air pollution. Based on wind speed data from Tazhong and the northern margins of the Taklimakan Desert in Xiaotang in spring, summer, autumn, and winter of 2014 and 2015, statistical methods were applied to determine the characteristics of the diurnal changes in wind speed near the ground and the differences in the wind speed profiles between the two sites. The average wind speed on a sunny day increased slowly with height during the day and rapidly at night. At heights below 4 m the wind speed during the day was higher than at night, whereas at 10 m the wind speed was lower during the day than at night. The semi-empirical theory and Monin-Obukhov (M-O) similarity theory were used to fit the NWS profile in the hinterland of the Tazhong Desert. A logarithmic law was applied to the neutral stratification wind speed profile, and an exponential fitting correlation was used for non-neutral stratification. The more unstable the stratification, the smaller the n. Using M-O similarity theory, the “linear to tens of” law was applied to the near-neutral stratification. According to the measured data, the distribution of  with stability was obtained. The   was obtained when the near-surface stratum was stable in the hinterland of Tazhong Desert and the   was obtained when it was unstable. In summer,   and  were 5.84 and 15.1, respectively, while in winter,   and   were 1.9 and 27.1, respectively.
DOI: 10.17632/dns8634w2x.1
title: GENRES and LIFE-Fin studies: EWASs of antihypertensive drug BP responses, Summary statistics

description: Summary statistics of the EWASs of antihypertensive blood pressure responses in the GENRES (four drugs) and in the LIFE-Fin (two drugs) studies.

Related article: 
Nuotio M-L, Sanez Tähtisalo H, Lahtinen A, Donner K, Fyhrquist F, Perola M, Kontula KK, Hiltunen TP. 
Pharmacoepigenetics of hypertension: genome-wide methylation analysis of responsiveness to four classes of antihypertensive drugs using a double-blind crossover study design.
Epigenetics, published online Feb 25, 2022.
(https://doi.org/10.1080/15592294.2022.2038418).

Epigenome-wide analysis was performed on the antihypertensive responses to four different monotherapies in the GENRES Study and to two different monotherapies in the LIFE-Fin Study. 
The GENRES Study is randomized, placebo-controlled, cross-over and single-centre by design. Each subject underwent all the monotherapy periods (except for few withdrawals). 
The EWAS study included ca. 200 Finnish males, aged 35 to 59 years.

The LIFE-Fin Study is part of the LIFE Study, including the Finnish subjects with DNA samples. 
The EWAS study included ca. 200 subjects from both the atenolol and the losartan arms of the study.

The analytical and statistical methods are described in the article.

Contact address: timo.hiltunen@hus.fi
DOI: 10.17632/4dv7jymwkp.1
title: How Mobile Payment Causes the Plastic Shopping Bags Surge

description: The data is transaction-level data given by a corporation from a city located in the southeast coast region in China. The data spans from 2016 to 2020. It includes the local residents’ plastic bag purchasing records with their payment information, either mobile or cash.
DOI: 10.48370/ofd/7u6ptf/pohjcp
title: Wasiluk Piotr.pdf

description: :unav
DOI: 10.48370/ofd/7u6ptf/ydg4gh
title: Wasiluk Piotr - Mapa sozologiczna.jpg

description: :unav
DOI: 10.48370/ofd/7u6ptf
title: ANALIZA WALORÓW PRZYRODNICZYCH I POZIOMU PRZEKSZTAŁCEŃ ŚRODOWISKA NA SKUTEK ANTROPOPRESJI W GMINIE BIELSK PODLASKI

description: Promotor: Elżbieta Malzahn
DOI: 10.17632/39wdhwdhyd.2
title: The Impact of Wind-Wave Coupling with WBLM on Coastal Storm Simulations

description: The data is saved with the python pickle module. One can use the following commend to read the data:
import pickle
f = open('data/exp_lon_lat_z0.pkl','rb')
obj=pickle.load(f)
f.close()
DOI: 10.17632/gk24h42jty.1
title: Analysis of IPC classification codes frequency in patents concerning "in situ" remediation technologies

description: The patent dataset analysed is based on search criteria aimed at retrieving patent documents dealing with "in situ" remediation technologies. The dataset has been created in the context of the Horizon2020 funded project "Posidon" (https://www.posidonproject.eu/). According to the European Environment Information and Observation Network for soil (EIONET-SOIL), the number of estimated potential soil contaminated sites is more than 2.5 million , of which about 14 % (340 000 sites) are highly likely to be contaminated, and hence in need of remediation measures. In terms of budget, the management of contaminated sites is estimated to cost around 6 billion Euros (€) annually. The aim of the project is to foster the development of innovative technical solutions through pre-commercial procurement selection procedures. The initial elucidation of the prior art, based on an extensive analysis of patent documents is fundamental. As Patlib centre staff members, also enrolled in the "monitoring board" of Posidon, we produce evidence that there is a considerable amount of predivulgation of decontamination technologies applicable for "in situ" reclamation of contaminated soil and/or water emerging from patent documents. Since we are especially interested in identifying the trends of the technologies that score the highest frequency of citation within the patent dataset, we illustrate one way of "unpacking" the patent dataset by identifying recurrent patterns of IPC classification codes. To this purpose, the IPC classification codes characteristic of each patent family of the dataset are analysed by isolating and clustering through subsequent stages the patent documents sharing specific IPC subgroups, main groups and subclasses patterns. During each phase the t-distributed stochastic neighbor embedding (tSNE) algorithm is applied to an array of patent families depending on presence/absence of IPC subgroups or main groups or subclasses, chosen among those most frequent in the dataset. Therefore, following the first round of clustering, those patent documents sharing specific IPC subgroups patterns are isolated and ready for additional investigation. The remaining patent documents undergo the second analytic phase by means of tSNE, therefore those patent documents sharing specific IPC main groups patterns are isolated and ready for additional investigation. The remaining patent documents undergo the final clustering by means of tSNE in order to separate the patent documents depending on specific patterns of IPC subclasses. By means of this procedure about 90% of the initial dataset (1632 simple families - as defined by the European Patent Office) become "unpacked" and clustered. Further assessments based on the patent bibliographic data can be performed, the essential advantages being that the technical content of each cluster is homogeneous and the results of different clusters can be subsequently aggregated, when a specific IPC code is common to such clusters.
DOI: 10.17632/w8b2fdv42k.1
title: Women entrepreneurs

description: Entrepreneurship has played a critical role in the expansion of the global market place's economy. In India women face more problems to startup their business. The researcher has analysed the complications handled by women entrepreneurs and impact for the growth of business performance in Aruppukottai District. By applying stratified random sampling technique, a sample of 154 women entrepreneurs were selected. The researcher has framed hypothesis for Impact for growth of business performance is not dependent on the complications handled by women entrepreneurs. Descriptive statistics and Simple Linear Regression Analysis are used in this study to test the hypothesis of compliance handled and the impact for growth of business in Aruppukottai Taluk. Complications handled by women entrepreneurs and impact for growth of business performance are 0.943 and 0.930 and reflects the measuring instrument's high-level reliability. The researcher has found that lack of compliance handled by women entrepreneurs and also identify the average level of business performance. The researcher concluded that impact of self-confidence, creativity, organising skills, motivational skills, decision-making, risk-taking ability, technical and managerial skills on business performance in sales, income, and growth in Aruppukottai Taluk are the major predictors of business performance in sales, income, and growth.
DOI: 10.17632/3r6hynp5xs.1
title: EMG Data Set for Machine Learning and  Deep Learning Problems

description: The Data consists of 3 parts. The dataset includes raw EMG data for 2 users. The users performed 5 hand gestures. i.e. Point, Middle Finger Extension, Closed Fist, Pinch, and Rest.  The data is acquired using a Thalmic Labs Myo Armband, which has a sampling frequency of 200Hz. The participants were made to hold a gesture for 5s and relax for 3s. 6 gesture samples were acquired in one session. 12 such sessions were conducted for each gesture for each user. This gives us 72 samples for each gesture. Another data set is prepared that represents the Time Domain features extracted for each processing window The gesture windows were identified and Time domain features were extracted for each window. The feature vector for each window is arranged row-wise. Each row represents a processing window and each column in that row represents an extracted Time Domain feature. The Time Domain Features extracted are Integrated EMG (IEMG), Mean Absolute Value (MAV, MAV1 and MAV2), Simple Squared Integral (SSI), Variance (VAR), Root Mean Square (RMS), Waveform Length (WL), Average Amplitude Change (AAC), Absolute Standard Deviation Value Difference (DASDV), Myo Pulse Percentage (MYOP), Log Detector (LOG), Willison Amplitude (WAmp), Slope Sign Change (SSC) and Number of Zero Crossings (ZC) and Amplitude of First Burst (AFB). The last column represents the Gesture Class point(0), middle finger extension (1), closed-grip (2), pinch (3), rest (4).

This data set can be used for gesture recognition problems.
DOI: 10.17632/k263y8pty5.1
title: LDHU3_09.0170

description: flagellar pocket cytoskeletal protein | BILBO1 | calmodulin-like protein containing EF hand domain
Leishmania donovani (HU3 strain)
DOI: 10.17632/697r9zjt3y.1
title: LDHU3_09.0130

description: RNA-binding protein 5-like protein | RBP9
Leishmania donovani (HU3 strain)
DOI: 10.17632/g6zj5dfrm3.2
title: Journal of Dairy Science Article de Serine

description: Supplemental Figure S1: Graphs of significant interaction between pH/pressure for D4,3 (A), pH/pressure for D3,2 (B), treatment/pressure for D3,2 (C), treatment/pressure for span value (D), pH/pressure for turbidity for rSM samples (E), and pH/pressure for turbidity for pSM samples (F).
DOI: 10.48370/ofd/93s3uj/sqsmnp
title: Soroczyńska Katarzyna.pdf

description: :unav
DOI: 10.48370/ofd/93s3uj
title: Gatunki inwazyjne w lasach na przykładzie Nadleśnictwa Bielsk, Leśnictwo Jelonka.

description: Promotor: Elżbieta Oksiejczuk
DOI: 10.17632/sgf5phyj73.1
title: Maturity model for Industry 4.0

description: Bibliography of maturity models for industry 4.0
DOI: 10.17632/yhn288f2rc.2
title: Dataset: Magnetic fabrics of rhyolite ignimbrites reveal complex emplacement dynamics of pyroclastic density currents, an example from the Altenberg–Teplice Caldera, Bohemian Massif

description: This is an anisotropy of magnetic susceptibility dataset of a manuscript submitted to Bulletin of Volcanology (Magnetic fabrics of rhyolite ignimbrites reveal complex emplacement dynamics of pyroclastic density currents, an example from the Altenberg–Teplice Caldera, Bohemian Massif)