cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15151/esrf-es-2254853983
title: Austrian Crystallographic Diffraction Consortium

description: The Austrian Crystallographic Diffraction Consortium (ACDC) BAG aims at supporting several macromolecular structural biology groups across Austria (in total
20 research groups at 9 institutions in 4 cities). We employ mainly the technique of X-ray crystallography to characterize macromolecular biological complexes,
but also solution scattering approaches are frequently used to characterize dynamic assemblies. Approval of this BAG will be essential for researchers in all
our groups to carry out their structural studies on various health-related and basic research-oriented topics, which are targeted at characterizing large molecular
assemblies or proteins currently under-represented in the PDB, including membrane proteins. Corresponding high-resolution diffraction data are only obtainable
through the use of synchrotron radiation sources. Thus regular synchrotron access is highly desirable to maintain a competitive advantage in our individual
research fields
DOI: 10.5284/1133085
title: Digital Archive from an Archaeological Evaluation to the rear of Swan View, The Street, Hatfield Peveral, Essex, January 2017

description: This collection comprises images, CAD data, site records and documents from an archaeological evaluation on land to the rear of Swan View, The Street, Hatfield Peveral, Essex. Work was carried out by Colchester Archaeological Trust (CAT) in January 2017. Finds included a wall foundation and brick floor.
DOI: 10.5281/zenodo.17154906
title: SARS-CoV-2 RBD Escape Velocity Outpaces mAb Development for 2025 Variants Already Encoded in Global Diversity

description: Structural surveillance of 5M+ genomes and filtered 133,893 SARS-CoV-2 genomes (≤2023) reveals pervasive escape at therapeutic mAb interfaces, with 100% of sequences that have been extracted from larger dataset harboring non-reference states at ≥1 of positions 417, 484, 486, 493, 498, 501. Dominant patterns including S417N/S484A/S501H (BA.1/BA.2; 67.9K seqs), S484E/S501Y (Gamma-like; 12.3K), and S417T (Beta/Omicron convergence; 4.8K) map directly to residues 498, 505, the structurally constrained overlap zone between hACE2 and next-gen mAbs like VYD2311. Mutational entropy and lineage turnover at these sites are not stochastic, they reflect targeted selection against antibody binding, already encoded in global pre-2024 diversity.

Full analysis of 10M+ genomes (2019 - August 2025) is underway, incorporating FLiRT variants (KP.3.1.1, LP.8.1, XEC) and quantifying silent pressure at 455, 456, 475, 477, 487, 489, 494 - residues poised to erode IC50 stability (0.0017 - 0.0420 μg/mL) within 12 months of market entry. Lineage extinction kinetics already outpace clinical development cycles; declining global sequencing coverage (driven by H5N1 redirection) will further probably reduce therapeutic durability assessments. This release serves as an early warning that may be helpful for teams working on mAb that are soon to be finalized for production grade - the full predictive framework, scripts, and preprint will follow.

——— Sample Data Preview ———

Top Escape Patterns (n=133,893; ≤2023):Pattern    CountNGYYLFAGNAFNYRSRTYGH    67,868  → S417N + S484A + S501H (BA.1/BA.2 core)KGYYLFAGSEFNYQSQTYGY    12,298  → S484E + S501Y (Gamma-like)TGYYLFAGSKFNYQSQTYGY    4,806   → S417T (Beta/Omicron convergence)

Critical mAb Interface Residues (Overlap hACE2: 498, 500, 501, 502, 505) show 100% non-reference occupancy.

Sample Sequence IDs with Escape:ARG/210316-1/2021AUS/KP.2/2024(and 133,891 others)

Full dataset (10M+ genomes, 2019 - 2025) under analysis - predictive escape maps for VYD2311 to be released with preprint.
DOI: 10.25574/44044
title: Chandra X-ray Observatory ObsId 44044
DOI: 10.15468/dl.6ra33q
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum corneliomulleri",
 "Year is 1970,2025",
 "HasCoordinate is true"
 ]
}

 The dataset includes 105 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043512-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/44054
title: Chandra X-ray Observatory ObsId 44054
DOI: 10.15468/dl.xn9r3t
title: Occurrence Download

description: A dataset containing 667 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Country is Italy",
 "TaxonKey is Reynoutria japonica",
 "Year 2000-2025"
 ]
}

 The dataset includes 667 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043513-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/44058
title: Chandra X-ray Observatory ObsId 44058
DOI: 10.26023/z7hq-z7dj-4f0s
title: PLOWS: NOAA/NOHRSC Western Great Lakes Snow Water Equivalent Imagery. Version 1.0

description: This data set contains daily snow water equivalent maps over the western Great Lakes region. The maps were generated by NOAA/NOHRSC and its National Snow Analysis. This data set contains imagery from the two PLOWS field phases, 6 February to 30 March 2009 and 13 October 2009 to 10 March 2010. No imagery are available for the period between the field phases.
DOI: 10.5284/1133115
title: Digital Archive from an Archaeological Evaluation south-west of Hill Farm House, Bromley Road, Parsons Heath, Essex, March 2024

description: This collection comprises photographs, documents, site records and a CAD drawing from an archaeological evaluation on land south-west of Hill Farm House carried out by Colchester Archaeological Trust in March 2024. No trace of the Roman road thought to have linked Mistley with Colchester was found along its projected route. Two parallel ditches were uncovered in the northern half of the site.
DOI: 10.25574/44060
title: Chandra X-ray Observatory ObsId 44060
DOI: 10.25574/44066
title: Chandra X-ray Observatory ObsId 44066
DOI: 10.25574/44073
title: Chandra X-ray Observatory ObsId 44073
DOI: 10.25574/44092
title: Chandra X-ray Observatory ObsId 44092
DOI: 10.5284/1133041
title: Digital Archive from an Archaeological Evaluation east of Richard Avenue, Wivenhoe, Essex, September 2021

description: This collection comprises photographs, a CAD drawing and scanned drawing sheets from an archaeological evaluation on land east of Richard Avenue, Wivenhoe, Essex. Work was carried out by Colchester Archaeological Trust (CAT) in September 2021. Excavation of the site revealed evidence of settlement here during the Late Iron Age and early Roman periods, including an urned cremation burial and artefactual evidence indicating that the site of a daub structure, likely a roundhouse, lies nearby.
DOI: 10.25574/44104
title: Chandra X-ray Observatory ObsId 44104
DOI: 10.5281/zenodo.17161330
title: Global Haplotype Landscape of SARS-CoV-2 Spike Contact Residues Reveals Dominant Escape Signatures and Systemic Sequencing Ambiguity

description: Audit of 4.5M SARS-CoV-2 contact residue haplotypes (20 positions, 60 nt each) extracted from global genomes.

All sequences length-validated (60 nt).

Top haplotype (1M+ copies) encodes Omicron signature (N417, G446, Y449...). 5.64% N-content highlights technical dropout at hypervariable sites.

11k duplicated haplotypes enable lineage tracking.

Includes full report, translated top variants, reproducible scripts.

Privately uploaded for job applications - available upon request.

Derived from real public data. 
description: Thsi is part of analysis of residues at 3 to 5 angstrom, the study is related to the measure of mAb escape.
DOI: 10.25574/44111
title: Chandra X-ray Observatory ObsId 44111
DOI: 10.25574/44112
title: Chandra X-ray Observatory ObsId 44112
DOI: 10.5281/zenodo.17257661
title: CHIP-SEQ
DOI: 10.5281/zenodo.17258521
title: CHIP-SEQ
DOI: 10.25574/44117
title: Chandra X-ray Observatory ObsId 44117
DOI: 10.5284/1133123
title: Digital Archive from an Archaeological Evaluation east of 9 East Street, Rochford, Essex, November 2024

description: This collection comprises photographs, a CAD drawing, site records and a Written Scheme of Investigation report from an archaeological evaluation of land to the east of 9 East Street, Rochford, Essex carried out by Colchester Archaeological Trust in November 2024. The evaluation revealed 19th-20th century building remains, including brick floors, brick walls and a backfilled cellar.
DOI: 10.25574/44141
title: Chandra X-ray Observatory ObsId 44141
DOI: 10.26023/a03v-7aze-ec0y
title: PLOWS: NOAA/NOHRSC Western Great Lakes Snow Depth Imagery. Version 1.0

description: This data set contains daily snow depth maps over the western Great Lakes region. The maps were generated by NOAA/NOHRSC and its National Snow Analysis. This data set contains imagery from the two PLOWS field phases, 6 February to 30 March 2009 and 13 October 2009 to 10 March 2010. No imagery are available for the period between the field phases.
DOI: 10.25574/44146
title: Chandra X-ray Observatory ObsId 44146
DOI: 10.25574/44153
title: Chandra X-ray Observatory ObsId 44153
DOI: 10.25574/44159
title: Chandra X-ray Observatory ObsId 44159
DOI: 10.5281/zenodo.17201049
title: Prevalent pemivibart escape constellations in global SARS-CoV-2 genomes (R346T, K444T, F456L, F486P)

description: PEMIVIBART ESCAPE MUTATION SUMMARY (2022 till 2024) (Early Chunk)============================================================

Input file: D:\tahirhb\pemivibart_escape_mutations.csvReport generated: pemivibart_escape_summary.py

Total sequences with ≥1 escape mutation: 33,372Total escape mutation events detected:      60,709

Mutation counts (Wuhan-Hu-1 numbering):   F456L:      8,631   R346T:     24,943   K444T:      7,860   F486P:     19,275

Sequences by number of escape mutations:  1 mutation:   11,935  2 mutations:   15,567  3 mutations:    5,840  4 mutations:       30

Top 10 sequences with most escape mutations:  1. USA/PR-CVL-022162/2024 → 4 mutations: F456L, F486P, K444T, R346T  2. USA/NMDOH-2023049605/2023 → 4 mutations: F456L, F486P, K444T, R346T  3. USA/NMDOH-2024010914/2024 → 4 mutations: F456L, F486P, K444T, R346T  4. USA/NY-PRL-231130_83E05/2023 → 4 mutations: F456L, F486P, K444T, R346T  5. USA/MN-MDH-38077/2023 → 4 mutations: F456L, F486P, K444T, R346T  6. USA/CO-CDPHE-41525514/2023 → 4 mutations: F456L, F486P, K444T, R346T  7. USA/CO-CDPHE-41556934/2023 → 4 mutations: F456L, F486P, K444T, R346T  8. USA/NJ-CDC-LC1073612/2023 → 4 mutations: F456L, F486P, K444T, R346T  9. USA/CO-CDPHE-41491811/2023 → 4 mutations: F456L, F486P, K444T, R346T  10. Denmark/DCGC-660941/2023 → 4 mutations: F456L, F486P, K444T, R346T

Interpretation:- Sequences with ≥2 mutations (e.g., F456L + R346T) are likely LP.8.1-like- Expected IC50 > 0.0189 µg/mL (probable)- F486P is rare but high-impact (predicted IC50 >> 0.04 µg/mL)-------------------------------------Early chunk of the bulk summary-------------------------------------
DOI: 10.5284/1133119
title: Digital Archive from an Archaeological Evaluation at Treble Tile Field, north of Colchester Road, West Bergholt, Essex, June 2024

description: This collection comprises photographs, a CAD drawing and site records from an archaeological evaluation at Treble Tile Field, north of Colchester Road, West Bergholt, Essex. Work was carried out by Colchester Archaeological Trust in June 2024. Excavations revealed an undated charcoal pit, a post-medieval/modern drainage ditch and two natural features.
DOI: 10.25574/44162
title: Chandra X-ray Observatory ObsId 44162
DOI: 10.25574/44176
title: Chandra X-ray Observatory ObsId 44176
DOI: 10.25574/44183
title: Chandra X-ray Observatory ObsId 44183
DOI: 10.5284/1133023
title: Digital Archive from an Archaeological Evaluation at The Forge, The Street, Bradwell, Essex, October 2020

description: This collection comprises photographs, a CAD drawing, site records and documents from an archaeological evaluation by trial trenching at The Forge, The Street, Bradwell, Essex. Work was carried out by Colchester Archaeological Trust in October 2020. Six ditches were uncovered, four undated and two post-medieval in date.
DOI: 10.15468/dl.8fkh2y
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phlox hortorum",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043514-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/d1zg-kzvp-fb0z
title: PLOWS: NOAA/NOHRSC Central US Snow Water Equivalent Imagery. Version 1.0

description: This data set contains daily snow water equivalent maps over the central US. The maps were generated by NOAA/NOHRSC and its National Snow Analysis. This data set contains imagery from the two PLOWS field phases, 6 February to 30 March 2009 and 13 October 2009 to 10 March 2010. No imagery are available for the period between the field phases.
DOI: 10.5284/1133084
title: Digital Archive from an Archaeological Evaluation at Red House Farm, Bridge Road, Levington, Suffolk, July 2024

description: This collection comprises photographs, documents, a CAD drawing and site records from an archaeological evaluation at Red House Farm carried out in advance of the construction of a new residential development. Work was undertaken by Colchester Archaeological Trust in July 2024. Excavations revealed six ditches, two pits/ ditches, two pits and two tree-throws.
DOI: 10.5284/1133087
title: Digital Archive from an Archaeological Evaluation at Harlowbury Primary School, Watlington Road, Harlow, Essex, January 2024

description: This collection comprises photographs, a CAD site drawing, site records and documents from an archaeological evaluation (nine trial-trenches) carried out on the West Paddock, Harlowbury Primary School, Watlington Road, Harlow, Essex by Colchester Archaeological Trust in January 2024. Excavations revealed a cluster of Late Bronze Age pits containing domestic refuse, suggesting a settlement stood here during that period.
DOI: 10.26023/dd6j-rfmj-60x
title: PLOWS: NOAA/NOHRSC Central US Snow Depth Imagery. Version 1.0

description: This data set contains daily snow depth maps over the central US. The maps were generated by NOAA/NOHRSC and its National Snow Analysis. This data set contains imagery from the two PLOWS field phases, 6 February to 30 March 2009 and 13 October 2009 to 10 March 2010. No imagery are available for the period between the field phases.
DOI: 10.5284/1133104
title: Digital Archive from an Archaeological Evaluation at Cymbeline Meadows, Colchester, Essex, August-September 2023

description: This collection comprises photographs, a CAD drawing, documents and site records from an archaeological evaluation on land at Cymbeline Meadows, Colchester, Essex, CO3 4AZ. Work was carried out by Colchester Archaeological Trust between August and September 2023. Evaluation at the site revealed at least two and possibly four Roman kilns, as well as associated spreads of kiln waste and quarry pits
DOI: 10.5281/zenodo.17258505
title: Communication Closure Fields and the Temporal Feed Hypothesis

description: Description:

This project explores the emerging framework that communication is the primary conserved quantity in physical systems — one that requires no intrinsic energy to persist but instead feeds exclusively on the passage of time. Under this view, communication is not an emergent property of matter and energy, but their precondition: it is the structured compatibility between dual state-fields (expansion vs. contraction, presence vs. absence, potential vs. redundancy) that allows any system to evolve.

 

A key hypothesis investigated here is that communication is inherently free for the system itself, but its growth and organization demand time as a filter. As the rate of communication increases, the system becomes progressively more chaotic — reflecting a fundamental trade-off between speed and stability. This dynamic explains why everything from molecular reactions to social systems exhibits the same “speed–accuracy” constraint: time is the cost of coherence.

 

The dataset includes:

 



Abstract closure-field visualizations derived from π and (4 − π) duals, showing where expansion and contraction fields balance, circulate, or diverge.

Divergence and curl maps that identify closure basins — zones where communication loops persist without anomaly consumption.

A physical analog simulation using gravitational attraction and pressure gradients, demonstrating how real systems naturally form balance corridors and stable loop regions under the same mathematical structure.


 

 

Together, these results support the Temporal Feed Hypothesis: communication’s persistence requires no external fuel, only the irreversible flow of time; and when time and gravity — the two universal filters — intersect, anomalies emerge that drive complexity. The work suggests that mass, energy, motion, and even entropy may be secondary projections of this deeper conservation law.
DOI: 10.5281/zenodo.17258506
title: Communication Closure Fields and the Temporal Feed Hypothesis

description: Description:

This project explores the emerging framework that communication is the primary conserved quantity in physical systems — one that requires no intrinsic energy to persist but instead feeds exclusively on the passage of time. Under this view, communication is not an emergent property of matter and energy, but their precondition: it is the structured compatibility between dual state-fields (expansion vs. contraction, presence vs. absence, potential vs. redundancy) that allows any system to evolve.

 

A key hypothesis investigated here is that communication is inherently free for the system itself, but its growth and organization demand time as a filter. As the rate of communication increases, the system becomes progressively more chaotic — reflecting a fundamental trade-off between speed and stability. This dynamic explains why everything from molecular reactions to social systems exhibits the same “speed–accuracy” constraint: time is the cost of coherence.

 

The dataset includes:

 



Abstract closure-field visualizations derived from π and (4 − π) duals, showing where expansion and contraction fields balance, circulate, or diverge.

Divergence and curl maps that identify closure basins — zones where communication loops persist without anomaly consumption.

A physical analog simulation using gravitational attraction and pressure gradients, demonstrating how real systems naturally form balance corridors and stable loop regions under the same mathematical structure.


 

 

Together, these results support the Temporal Feed Hypothesis: communication’s persistence requires no external fuel, only the irreversible flow of time; and when time and gravity — the two universal filters — intersect, anomalies emerge that drive complexity. The work suggests that mass, energy, motion, and even entropy may be secondary projections of this deeper conservation law.
DOI: 10.5284/1133057
title: Digital Archive from an Archaeological Evaluation at 6 Church Green, Coggeshall, Essex, May 2019

description: This collection comprises photographs, a CAD drawing, documents and site records from an archaeological evaluation by trial-trenching at 6 Church Green, Coggeshall, Essex. Work was carried out by Colchester Archaeological Trust in May 2019. Three post-medieval pits were uncovered, as well as Roman material including a 1st-century brooch and a possible nummus, as well as a small amount of building material which suggests that the remains of a Roman building lie nearby.
DOI: 10.5284/1133092
title: Digital Archive from an Archaeological Evaluation at 31A Julien Court Road, Braintree, Essex, January 2024

description: This collection comprises images, a CAD drawing, site records and documents from an archaeological evaluation (four trial-trenches) carried out at 31a Julien Court Road, Braintree, Essex by Colchester Archaeological Trust in January 2024. Excavations at the site uncovered a pit or tree-throw, two gullies and a ditch.
DOI: 10.5284/1133116
title: Digital Archive from an Archaeological Evaluation adjacent to 3 Rookery Lane, Great Totham, Essex, February 2024

description: This collection comprises photographs, a CAD drawing, site records and a brief document from an archaeological evaluation on land adjacent to 3 Rookery Lane, Great Totham, Essex, CM9 8DF. Work was carried out by Colchester Archaeological Trust in February 2024. The excavation of two trial trenches uncovered a modern pit and an undated pit or natural feature.
DOI: 10.26023/sy1g-9rxq-ze08
title: PLOWS: Constant Pressure Level Imagery. Version 1.0

description: This data set contains 12-hourly constant pressure level maps over the continental US. The levels included are 200, 250, 300, 500, 700 and 850 mb. During PLOWS 2009-2010 the 925 mb level was also included. The maps were generated by NCAR/RAL and contain actual station observations and the RUC initial analysis. This data set contains imagery from the two PLOWS field phases, 7 January to 30 March 2009 and 16 October 2009 to 10 March 2010. No imagery are available for the period between the field phases.
DOI: 10.60686/t-fsd3961
title: FSD3961 Free-time Residences and Energy Use 2023
DOI: 10.5284/1133099
title: Digital Archive from an Archaeological Evaluation adjacent to 'Three Ways', 74 The Causeway, Great Dunmow, Essex, June 2024

description: This collection comprises photographs, documents a CAD drawing and site records from an archaeological evaluation (three trial-trenches) on land adjacent to 'Three Ways', 74 The Causeway, Great Dunmow, Essex, CM6 2AA. Work was carried out by Colchester Archaeological Trust in June 2024. Evaluation revealed a post-medieval pit and a ditch which produced a sherd of Roman pottery.
DOI: 10.5284/1133102
title: Digital Archive from an Archaeological Evaluation (Phase 2d) at Fiveways Fruit Farm, Dyers Road, Stanway, Colchester, Essex, July-August 2024

description: This collection comprises photographs, a CAD drawing and site records from an archaeological evaluation (29 trial-trenches) undertaken at Fiveways Fruit Farm as part of a phased evaluation scheme in advance of the construction of a new housing estate. Work was carried out by Colchester Archaeological Trust between July and August 2024. The Phase 2d evaluation did not reveal any significant archaeological remains.
DOI: 10.5284/1133036
title: Digital Archive from Multiple Archaeological Investigations at 60 Creffield Road, Colchester, Essex, 2019-2021

description: This collection comprises photographs, a CAD drawing, sitre records and documents from an archaeological evaluation, excavation and two phases of monitoring at 60 Creffield Road, Colchester, Essex between December 2019 and July 2021 during the redevelopment of the site. Work was carried out by Colchester Archaeological Trust. Investigations identified the Colchester-to-Gosbecks Roman road aligned northeast to southwest across the development site.
DOI: 10.6084/m9.figshare.30273316
title: PD-Supplementary Table 1 Sensitivity analysis of threshold effect analysis

description: PD-Supplementary Table 1 Sensitivity analysis of threshold effect analysis
DOI: 10.6084/m9.figshare.30273316.v1
title: PD-Supplementary Table 1 Sensitivity analysis of threshold effect analysis

description: PD-Supplementary Table 1 Sensitivity analysis of threshold effect analysis