cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3uasmr
title: Occurrence Download

description: A dataset containing 228058 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "Country is Chile",
 "OccurrenceStatus is Present",
 "Year 2008-2025"
 ]
}

 The dataset includes 228058 records from 387 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005280-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/j48g7cn2r7.1
title: Research Data

description: This is the raw data for "Microbial extracellular enzyme activities become C-limited under nitrogen fertilization and changes in water supply in a dry steppe, Loess Plateau, China".
DOI: 10.17632/j48g7cn2r7.2
title: Research Data

description: This is the raw data for "Microbial extracellular enzyme activities become C-limited by vegetational responses to nitrogen fertilization and changes in water supply in a dry steppe".
DOI: 10.5281/zenodo.15098998
title: Data Associated With: A forward genetic screen identifies Sirtuin1 as a driver of neuroendocrine prostate cancer

description: This dataset contains the raw and intermediate data files for the TAPDANCE (Transposon Analysis Pipeline for Driver And Cancer Element identification) analysis used in the paper "A forward genetic screen identifies Sirtuin1 as a driver of neuroendocrine prostate cancer."

The dataset includes:



seqs.tab - Raw sequencing reads containing barcodes and IRDR (inverted repeat/direct repeat) sequences from a Sleeping Beauty transposon screen in a mouse model of neuroendocrine prostate cancer.

mapping/ - Intermediate mapping files produced by TAPDANCE.pl that show the genomic locations of transposon insertions.


These files complement the complete TAPDANCE analysis results available in the GitHub repository: https://github.com/alevax/sleeping-beauty-paper

The TAPDANCE pipeline identifies common insertion sites (CIS) that represent potential driver genes in neuroendocrine prostate cancer development. This dataset enables reproducibility of the analysis described in the paper and provides a resource for researchers studying genetic drivers of aggressive prostate cancer subtypes.
DOI: 10.5281/zenodo.15098997
title: Data Associated With: A forward genetic screen identifies Sirtuin1 as a driver of neuroendocrine prostate cancer

description: This dataset contains the raw and intermediate data files for the TAPDANCE (Transposon Analysis Pipeline for Driver And Cancer Element identification) analysis used in the paper "A forward genetic screen identifies Sirtuin1 as a driver of neuroendocrine prostate cancer."

The dataset includes:



seqs.tab - Raw sequencing reads containing barcodes and IRDR (inverted repeat/direct repeat) sequences from a Sleeping Beauty transposon screen in a mouse model of neuroendocrine prostate cancer.

mapping.zip - Compressed intermediate mapping files produced by TAPDANCE.pl that show the genomic locations of transposon insertions.

CIS.zip - Compressed intermediate files generated during the Common Insertion Site (CIS) analysis, containing statistical calculations and region identifications.


These files complement the complete TAPDANCE analysis results available in the GitHub repository: https://github.com/alevax/sleeping-beauty-paper

The TAPDANCE pipeline identifies common insertion sites (CIS) that represent potential driver genes in neuroendocrine prostate cancer development. This dataset enables reproducibility of the analysis described in the paper and provides a resource for researchers studying genetic drivers of aggressive prostate cancer subtypes.
DOI: 10.5281/zenodo.15101450
title: Data Associated With: A forward genetic screen identifies Sirtuin1 as a driver of neuroendocrine prostate cancer

description: This dataset contains the raw and intermediate data files for the TAPDANCE (Transposon Analysis Pipeline for Driver And Cancer Element identification) analysis used in the paper "A forward genetic screen identifies Sirtuin1 as a driver of neuroendocrine prostate cancer."

The dataset includes:



seqs.tab - Raw sequencing reads containing barcodes and IRDR (inverted repeat/direct repeat) sequences from a Sleeping Beauty transposon screen in a mouse model of neuroendocrine prostate cancer.

mapping.zip - Compressed intermediate mapping files produced by TAPDANCE.pl that show the genomic locations of transposon insertions.

CIS.zip - Compressed intermediate files generated during the Common Insertion Site (CIS) analysis, containing statistical calculations and region identifications.


These files complement the complete TAPDANCE analysis results available in the GitHub repository: https://github.com/alevax/sleeping-beauty-paper

The TAPDANCE pipeline identifies common insertion sites (CIS) that represent potential driver genes in neuroendocrine prostate cancer development. This dataset enables reproducibility of the analysis described in the paper and provides a resource for researchers studying genetic drivers of aggressive prostate cancer subtypes.
DOI: 10.15468/dl.yajqax
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eremias andersoni Darevsky & Szczerbak, 1978"
 ]
}

 The dataset includes 14 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005298-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7r2as
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "Country is Chile",
 "TaxonKey is one of (Virilastacus araucanius (Faxon, 1914), Trichomycterus chiltoni (Eigenmann, 1928), Percilia irwini Eigenmann, 1928, Aegla bahamondei Jara, 1982, Brachygalaxias bullocki (Regan, 1908))",
 "Year 1993-2025"
 ]
}

 The dataset includes 24 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005300-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8kqsg
title: Occurrence Download

description: A dataset containing 94933 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "Country is Chile",
 "OccurrenceStatus is Present",
 "Year 2015-2025"
 ]
}

 The dataset includes 94933 records from 227 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005286-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/7zsvjy2r7d
title: Halophytes reclamation soil through improving soil structures, enhancing SOC storage and decreasing salinity in coastal saline land

description: This is basic data related to the article “Halophytes reclamation soil through improving soil structures, enhancing SOC storage and decreasing salinity in coastal saline land”.
DOI: 10.17632/7zsvjy2r7d.1
title: Halophytes reclamation soil through improving soil structures, enhancing SOC storage and decreasing salinity in coastal saline land

description: This is basic data related to the article “Halophytes reclamation soil through improving soil structures, enhancing SOC storage and decreasing salinity in coastal saline land”.
DOI: 10.15468/dl.w656fw
title: Occurrence Download

description: A dataset containing 146461 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "Continent is South America",
 "Country is Chile",
 "Year 2010-2025"
 ]
}

 The dataset includes 146461 records from 295 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005287-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m9sg2v
title: Occurrence Download

description: A dataset containing 185380 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Material citation)",
 "Country is Chile",
 "Year 2000-2025"
 ]
}

 The dataset includes 185380 records from 145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005290-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ygdu22
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "TaxonKey is Trichomycterus chiltoni (Eigenmann, 1928)"
 ]
}

 The dataset includes 26 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005304-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18150/jmsvys
title: Ciprofloxacin pre-exposure influences individual cell MIC and heteroresistance of bacteria inside microfluidic droplets

description: Data files for article entitled "Ciprofloxacin pre-exposure influences individual cell MIC and heteroresistance of bacteria inside microfluidic droplets", and includes the code for analysis of droplet images, code for further analysis to do Gompertz fitting, distribution etc
DOI: 10.5281/zenodo.15098550
title: Supplementary Material for the Manuscript *Thermal Refugia Indicate Physiological Evolution in Reef Corals* submitted to Global Change Biology

description: All data used in the comparative analyses (log-transformed matrices, phylogenetic trees, and R scripts) related to the submitted manuscript entitled Thermal refugia indicate physiological evolution in reef corals. Further details can be found in the accompanying README file.
DOI: 10.15468/dl.2jgtjj
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trichomycterus chiltoni (Eigenmann, 1928)"
 ]
}

 The dataset includes 51 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005310-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vrr4hj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "Country is Chile",
 "OccurrenceStatus is Present",
 "TaxonKey is Plectostylus chilensis (Lesson, 1830)",
 "Year 2006-2025"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005309-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m9w3tw
title: Occurrence Download

description: A dataset containing 1460 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eremias arguta (Pallas, 1773)"
 ]
}

 The dataset includes 1460 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005312-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18150/g6bidn
title: Reversed adaptive system of PNIPAM-decorated nanoparticles induced by the ionic strength of the subphase

description: We investigate the effects of ionic strength on the self-assembly of poly(N-isopropyl acrylamide)-nanoparticles (PSiFe) at the air-water interface. These responsive nanoparticles exhibit temperature-dependent behavior, forming more compact films at high temperatures (above the lower critical solution temperature, LCST). Upon adding potassium chloride (KCl) to the subphase, we observe an unexpected increase in the distance between nanoparticles, attributed to the creation of ionic clouds around them. This shifts the isotherms significantly compared to those formed at pure water, as larger areas of the interface are required to accommodate the same number of particles. Moreover, our findings reveal that increasing ionic strength alters the PNIPAM conformation, inhibiting nanoparticle aggregation even at higher temperatures. Using Langmuir-Blodgett techniques, we confirm that ionic strength modulates particle spacing and assembly dynamics. These results provide new insights into the control of nanoparticle interactions at interfaces, with potential applications in the design of tunable, stimuli-responsive materials.
DOI: 10.15468/dl.mzfeqa
title: Occurrence Download

description: A dataset containing 1039 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eremias argus Peters, 1869"
 ]
}

 The dataset includes 1039 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005311-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xh7jv4
title: Occurrence Download

description: A dataset containing 176418 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Material sample",
 "Country is Chile",
 "OccurrenceStatus is Present",
 "Year 1990-2025"
 ]
}

 The dataset includes 176418 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005297-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.943zrs
title: Occurrence Download

description: A dataset listing the 482 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is Apidae"
 ]
}

 The dataset's 482 records were derived from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005295-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28684070
title: Mock community matrices

description: Raw read coverage of TSS windows for mock community analysis samples
DOI: 10.6084/m9.figshare.28684070.v1
title: Mock community matrices

description: Raw read coverage of TSS windows for mock community analysis samples
DOI: 10.15468/dl.vzv3mw
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Degelia atlantica (Degel.) P.M.Jørg. & P.James",
 "Year 1979-2013"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029953-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zynbkn
title: Occurrence Download

description: A dataset containing 1173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pectenia atlantica (Degel.) P.M.Jørg., L.Lindblom, Wedin & S.Ekman",
 "Year 1979-2013"
 ]
}

 The dataset includes 1173 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029954-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive150510.20251217.10
title: Streptococcus mitis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive150511.20241212.9.2
title: Streptococcus salivarius

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0138245.10fu
title: SH0138245.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive150511.20251217.10
title: Streptococcus salivarius

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive150512.20241212.9.2
title: Schaalia meyeri

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0138246.10fu
title: SH0138246.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive150512.20251217.10
title: Schaalia meyeri

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive150513.20241212.9.2
title: Lactobacillus rhamnosus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0138247.10fu
title: SH0138247.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.e95c3m
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brunfelsia americana",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061864-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ygm237
title: Occurrence Download

description: A dataset containing 35155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gymnoris superciliaris Blyth, 1845)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 35155 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071288-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cctvc55
title: CCDC 770107: Experimental Crystal Structure Determination

description: Related Article: Yan-Ping He, Lei Cheng, Liu-Cheng Gui, Kun Hu, Hua-Hong Zou|2011|Jiegou Huaxue|30|190|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccw6k8w
title: CCDC 810658: Experimental Crystal Structure Determination

description: Related Article: Yan-Ping He, Lei Cheng, Liu-Cheng Gui, Kun Hu, Hua-Hong Zou|2011|Jiegou Huaxue|30|190|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.ha7utc
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000808-180925134338326/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g9grad
title: Occurrence Download

description: A dataset containing 4032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Crithagra frontalis (Reichenow, 1904))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4032 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071290-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.