cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3976752.v2
title: List of UNAM Journals Under Contract with Elsevier

description: Source data: UNAM contract DGAJ-DPI-39-081114-241, signed 1 February 2015.<br><br>Freedom of Information request ongoing: Mexico's Plataforma Nacional de Transparencia request number  6440000038816 (28 July 2016), still unanswered. <br><br>File updated on 7 August 2017, to reflect which Elsevier 'hub' journal URLs were active, and where they linked to. A column including the ScienceDirect home pages for each journal has been added too. All journals were crosschecked manually and individually.<br><br>Freedom of Information request ongoing: Mexico's Plataforma Nacional de 
Transparencia request number  6440000038816 (7 August 2017), still 
unanswered. <br><br>Download the file to view correct date data (data on figshare viewer may be displayed differently). <br><br>Shared for educational use. <br>
DOI: 10.6084/m9.figshare.c.3666502_d51
title: Example of Egyptian fruit bat vocalization - Social call (4)

description: An example of a single syllable of an Egyptian fruit bat social vocalization (one of many variations found in the database)
DOI: 10.6084/m9.figshare.c.3666502_d62
title: Example video of sleep related interaction (1)

description: A bat is vocalizing while in the daytime sleeping cluster. Notice the pups held under the wing of both females.
DOI: 10.6084/m9.figshare.c.3666502_d56
title: Example video of fight vocalizations (in pups of Treatment #17)

description: A characteristic aggressive interaction between two pups in Treatment #17 (isolates). The spotlight marks the interacting pair.
DOI: 10.6084/m9.figshare.c.3666502_d49
title: Example of Egyptian fruit bat vocalization - Social call (2)

description: An example of a single syllable of an Egyptian fruit bat social vocalization (one of many variations found in the database)
DOI: 10.6084/m9.figshare.c.3666502_d57
title: Example video of fight vocalizations (in pups of Treatment #16)

description: A characteristic aggressive interaction between two pups in Treatment #16 (control for Treatment #17). The spotlight marks the interacting pair.
DOI: 10.6084/m9.figshare.c.3727411_d364
title: ZIP-file of fluorescent 3D image stacks of bioreactor breast cancer cell mono-cultures treated with fulvestrant

description: ZIP-file containing confocal image stacks from MCF7 (GFP) 3D mono-cultures embedded in alginate capsules and grown in a stirred tank bioreactor. The cultures are treated with fulvestrant. Images are 16-bit multi-channel image stacks containing the RFP, GFP, and EdU channel.  The pixelsizes are ( 1.4 x 1.4 x 1 ) micron for 10x magnification images and ( 0.7 x 0.7 x 1 ) micron for 20x magnification images. Images are in (OME.)TIF-format, where OME.TIF-images contain metadata which can be extracted by e.g. the Bioformats ImageJ plugin.
DOI: 10.6084/m9.figshare.c.3727411_d368
title: ZIP-file of fluorescent 3D image stacks of bioreactor breast cancer cell mono-cultures treated with DMSO (control samples)

description: ZIP-file containing confocal image stacks from MCF7 (GFP) 3D mono-cultures embedded in alginate capsules and grown in a stirred tank bioreactor. These are the control samples treated with DMSO. Images are 16-bit multi-channel image stacks containing the RFP, GFP, and EdU channel.  The pixelsizes are ( 1.4 x 1.4 x 1 ) micron for 10x magnification images and ( 0.7 x 0.7 x 1 ) micron for 20x magnification images. Images are in (OME.)TIF-format, where OME.TIF-images contain metadata which can be extracted by e.g. the Bioformats ImageJ plugin.
DOI: 10.6084/m9.figshare.c.3727411_d370
title: ZIP-file of fluorescent 3D image stacks of bioreactor lung cancer cell co-cultures (CAF) treated with docetaxel

description: ZIP-file containing confocal image stacks from NCI-H1437 (RFP) 3D co-cultures (Cancer Associated Fibroblasts, GFP) embedded in alginate capsules and grown in a stirred tank bioreactor. The cultures are treated with docetaxel. Images are 16-bit multi-channel image stacks containing the RFP, GFP, and EdU channel.  The pixelsizes are ( 1.4 x 1.4 x 1 ) micron for 10x magnification images and ( 0.7 x 0.7 x 1 ) micron for 20x magnification images. Images are in (OME.)TIF-format, where OME.TIF-images contain metadata which can be extracted by e.g. the Bioformats ImageJ plugin.
DOI: 10.6084/m9.figshare.c.3666502_d31
title: Egyptian fruit bat vocalizations files 223

description: Recordings of Rousettus aegyptiacus social vocalizations
DOI: 10.6084/m9.figshare.c.3727411_d339
title: Example CellProfiler pipeline for the image analysis of the prostate cancer cell floater cultures

description: Example CellProfiler pipeline for the image analysis of the prostate cancer (LNCaP) floater culture samples (also uploaded to this figShare record under "ZIP-file of fluorescent images of floater prostate cancer cell cultures"). To use this pipeline it should be opened with CellProfiler and the file paths in the first module "Images" (which loads the input images) should be adapted to reflect the location of the images, as well as the output paths in the modules "ExportToSpreadSheet" and "SaveImages".
DOI: 10.6084/m9.figshare.c.3727411_d345
title: RawData_BR Lung_Breast_SD.xls

description: Raw data fluorescent growth curve bioreactor breast/lung
DOI: 10.6084/m9.figshare.c.3727411_d355
title: ZIP-file of fluorescent images of floater breast cancer cell mono-culteres

description: ZIP-file containing widefield images from MCF7 (GFP) 3D mono-cultures grown as floaters. Images are gray-valued 8-bit containing the GFP channel. The pixelsize is 2.22 micron. Images are in TIF format.
DOI: 10.6084/m9.figshare.c.3666502_d25
title: Egyptian fruit bat vocalizations files 217

description: Recordings of Rousettus aegyptiacus social vocalizations
DOI: 10.6084/m9.figshare.c.3666502_d28
title: Egyptian fruit bat vocalizations files 219

description: Recordings of Rousettus aegyptiacus social vocalizations
DOI: 10.6084/m9.figshare.c.3666502_d45
title: Example of Egyptian fruit bat vocalization - Social call (1)

description: An example of a single syllable of an Egyptian fruit bat social vocalization (one of many variations found in the database)
DOI: 10.6084/m9.figshare.c.3662366_d741
title: Full body CT scan of a Heterodontus japonicus (RMNH.PISC.4202)

description: This file includes 911 DICOM files of a male Heterodontus japonicus specimen housed in the spirit collection of Naturalis Biodiversity Center, Leiden, the Netherlands with registrationnumber RMNH.PISC.4202. The specimen is scanned in a medical CT scanner (Toshiba Aquilion 64) at the Leiden University Medical Center, the Netherlands at 100 kV and 150 mAs with a slice thickness of 0.5 mm.
DOI: 10.6084/m9.figshare.c.3273731_d2
title: Curated dataset with data and metadata from relevant cyanobacterial strains listed in the online database CyanoType

description: This is a curated dataset comprising a list of relevant cyanobacterial strains for taxonomy and phylogenomics studies, with useful information for each strain.
DOI: 10.6084/m9.figshare.c.3273731_d4
title: 16S rRNA gene sequences alignment of a subset of relevant cyanobacterial strains

description: Alignment (Fasta file) of a subset of 16S rRNA gene sequences from cyanobacterial strains included in the online database CyanoType
DOI: 10.6084/m9.figshare.c.3641399_d8.v1
title: MOESM8 of Genome-wide methylation analysis demonstrates that 5-aza-2-deoxycytidine treatment does not cause random DNA demethylation in fragile X syndrome cells

description: Additional file 8: Table S5. List of DMRs and their chromosome position in the comparison between WT1 and WT2 versus FXS2.
DOI: 10.6084/m9.figshare.c.3596075_d6.v1
title: Additional file 5: of Genetic origin and composition of a natural hybrid poplar Populus × jrtyschensis from two distantly related species

description: Estimates of genetic diversity (per locus) for each species and their hybrid based on 20 microsatellite loci. (XLS 36 kb)
DOI: 10.5281/zenodo.14504902
title: Analysis scripts and datasets for Morée et al. "Long-term impacts of global temperature stabilization and overshoot on marine species"

description: Data and analysis scripts for the publications: "Long-term impacts of global temperature stabilization and overshoot on marine species" by Morée et al.
DOI: 10.5281/zenodo.14504903
title: Analysis scripts and datasets for Morée et al. "Long-term impacts of global temperature stabilization and overshoot on marine species"

description: Data and analysis scripts for the publications: "Long-term impacts of global temperature stabilization and overshoot on marine species" by Morée et al.
DOI: 10.6084/m9.figshare.5640379.v1
title: databases.tar.gz

description: Databases required to run the ConFindr assembly pipeline.<br>
DOI: 10.5281/zenodo.7936217
title: Temporal changes of gene expression in health and mental disorders. Supporting Data

description: This dataset provides data necessary to replicate the results of the time-perturbation analysis of gene expression in health and mental disorders. The corresponding code is available in the GitHub repository https://github.com/susieavagyan/BrainExp-TemporalDynamics․

The content of the data archive is following:



"GTEX_unzipped" folder contains  GTEx single-tissue cis-eQTL dataset (v8)

"pheno" folder  contains sample phenotype data for datasets used in the analysis 

"scRNA-Ruzicka_data" folder  contains gene signatures for neuronally associated processes and brian cell populations from Ruzicka, W. Brad, Shahin Mohammadi, Jose Davila-Velderrain, Sivan Subburaju, Daniel Reed Tso, Makayla Hourihan, and Manolis Kellis. 2020. “Single-Cell Dissection of Schizophrenia Reveals Neurodevelopmental-Synaptic Axis and Transcriptional Resilience.” MedRxiv, January, 2020.11.06.20225342. https://doi.org/10.1101/2020.11.06.20225342 paper.

"v5_results.SOM - Results" folder  contains the transcriptome analysis results generated with oposSOM pipeline  

"BM.table.Rdata" file contains gene symbol ENSEMBL ID conversion table required for eQTL analysis 

"Brain_development_v3.Rdata" file contains combined raw gene expression data of datasets used in this analysis

"som_input_v5.Rdata" file contains batch adjusted and normalized gene expression matrix that was used as an input for oposSOM pipeline.
DOI: 10.5281/zenodo.7936218
title: Temporal changes of gene expression in health and mental disorders. Supporting Data

description: This dataset provides data necessary to replicate the results of the time-perturbation analysis of gene expression in health and mental disorders. The corresponding code is available in the GitHub repository https://github.com/susieavagyan/BrainExp-TemporalDynamics․

The content of the data archive is following:



"GTEX_unzipped" folder contains  GTEx single-tissue cis-eQTL dataset (v8)

"pheno" folder  contains sample phenotype data for datasets used in the analysis 

"scRNA-Ruzicka_data" folder  contains gene signatures for neuronally associated processes and brian cell populations from Ruzicka, W. Brad, Shahin Mohammadi, Jose Davila-Velderrain, Sivan Subburaju, Daniel Reed Tso, Makayla Hourihan, and Manolis Kellis. 2020. “Single-Cell Dissection of Schizophrenia Reveals Neurodevelopmental-Synaptic Axis and Transcriptional Resilience.” MedRxiv, January, 2020.11.06.20225342. https://doi.org/10.1101/2020.11.06.20225342 paper.

"v5_results.SOM - Results" folder  contains the transcriptome analysis results generated with oposSOM pipeline  

"BM.table.Rdata" file contains gene symbol ENSEMBL ID conversion table required for eQTL analysis 

"Brain_development_v3.Rdata" file contains combined raw gene expression data of datasets used in this analysis

"som_input_v5.Rdata" file contains batch adjusted and normalized gene expression matrix that was used as an input for oposSOM pipeline.
DOI: 10.15468/dl.mqy4ad
title: Occurrence Download

description: A dataset containing 109017 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nicrophorus Fabricius, 1775"
 ]
}

 The dataset includes 109017 records from 774 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037485-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13642496
title: Dataset and code related to the publication "Aligning heat pump operation with market signals: A win-win scenario for the electricity market and its actors?"

description: General remarks

This dataset and code was developed and used for the publication



E. Sperber, C. Schimeczek, U. Frey, K. K. Cao, V. Bertsch: Aligning heat pump operation with market signals: A win-win scenario for the electricity market and its actors? In: Energy Reports, Volume 13, June 2025, pp. 491-513, https://doi.org/10.1016/j.egyr.2024.12.028


Data description

The dataset "heat_pump_results.zip" includes all relevant results underlying the above publication. 

The data is organized according to the scenarios considered in the analysis. Therefore, each folder is labelled according to the scenario structure, starting with the building efficiency scenario ("BAU" / "EFF"), followed by the PV scenario ("no-PV" / "with-PV"), the HP operation scenario ("ModFlex_V", "ModFlex_F", "HighFlex_V"), the simulation year (2030 / 2040) and the weather year (2017 / 2019 / 2023).

Within each result directory per scenario, the data is further structured according to the results at the market level ("AMIRIS") and at the user level ("GAMS" and "INFLEX"). The "INFLEX" directory contains results for the inflexible reference operation, while the "GAMS" directory contains results for the cost-minimized heat pump operation at the level of building types. The data at the user level is further structured by location. Data is given in hourly resolution.

The scenario evaluation indicators presented in the publication, as well as other indicators, are summarized in the "MPI" directory.

Abbreviations used:



HP: heat pump

SH: space heating

DHW: domestic hot water

AW: air/water

BW: brine/water

PV: photovoltaic

Ti: indoor air temperature

Ttes: temperature of domestic hot water storage tank


Code description

The code to generate the results is given in "heat_pump_workflow.zip". Please follow the instructions in the README.md that you can find in this archive.

Conctact

Please contact Evelyn Sperber at evelyn.sperber@dlr.de if you have any questions.
DOI: 10.5281/zenodo.13642497
title: Dataset related to the publication "Aligning heat pump operation with market signals: a win-win scenario for the electricity market and its actors?"

description: General remarks

This dataset was developed and used for the publication



E. Sperber, C. Schimeczek, U. Frey, K. K. Cao, V. Bertsch: Aligning heat pump operation with market signals: a win-win scenario for the electricity market and its actors? (currently under review)


The software utilized in this research will be available for download shortly.

Data description

The dataset includes all relevant results underlying the above publication. 

The data is organized according to the scenarios considered in the analysis. Therefore, each folder is labelled according to the scenario structure, starting with the building efficiency scenario ("BAU" / "EFF"), followed by the PV scenario ("no-PV" / "with-PV"), the HP operation scenario ("ModFlex_V", "ModFlex_F", "HighFlex_V"), the simulation year (2030 / 2040) and the weather year (2017 / 2019 / 2023).

Within each result directory per scenario, the data is further structured according to the results at the market level ("AMIRIS") and at the user level ("GAMS" and "INFLEX"). The "INFLEX" directory contains results for the inflexible reference operation, while the "GAMS" directory contains results for the cost-minimized heat pump operation at the level of building types. The data at the user level is further structured by location. Data is given in hourly resolution.

The scenario evaluation indicators presented in the publication, as well as other indicators, are summarized in the "MPI" directory.

Abbreviations used:



HP: heat pump

SH: space heating

DHW: domestic hot water

AW: air/water

BW: brine/water

PV: photovoltaic

Ti: indoor air temperature

Ttes: temperature of domestic hot water storage tank


Conctact

Please contact Evelyn Sperber at evelyn.sperber@dlr.de if you have any questions.
DOI: 10.5281/zenodo.14013602
title: Dataset and code related to the publication "Aligning heat pump operation with market signals: a win-win scenario for the electricity market and its actors?"

description: General remarks

This dataset and code was developed and used for the publication



E. Sperber, C. Schimeczek, U. Frey, K. K. Cao, V. Bertsch: Aligning heat pump operation with market signals: a win-win scenario for the electricity market and its actors? (currently under review)


Data description

The dataset "heat_pump_results.zip" includes all relevant results underlying the above publication. 

The data is organized according to the scenarios considered in the analysis. Therefore, each folder is labelled according to the scenario structure, starting with the building efficiency scenario ("BAU" / "EFF"), followed by the PV scenario ("no-PV" / "with-PV"), the HP operation scenario ("ModFlex_V", "ModFlex_F", "HighFlex_V"), the simulation year (2030 / 2040) and the weather year (2017 / 2019 / 2023).

Within each result directory per scenario, the data is further structured according to the results at the market level ("AMIRIS") and at the user level ("GAMS" and "INFLEX"). The "INFLEX" directory contains results for the inflexible reference operation, while the "GAMS" directory contains results for the cost-minimized heat pump operation at the level of building types. The data at the user level is further structured by location. Data is given in hourly resolution.

The scenario evaluation indicators presented in the publication, as well as other indicators, are summarized in the "MPI" directory.

Abbreviations used:



HP: heat pump

SH: space heating

DHW: domestic hot water

AW: air/water

BW: brine/water

PV: photovoltaic

Ti: indoor air temperature

Ttes: temperature of domestic hot water storage tank


Code description

The code to generate the results is given in "heat_pump_workflow.zip". Please follow the instructions in the README.md.

Conctact

Please contact Evelyn Sperber at evelyn.sperber@dlr.de if you have any questions.
DOI: 10.5281/zenodo.14191160
title: Dataset and code related to the publication "Aligning heat pump operation with market signals: A win-win scenario for the electricity market and its actors?"

description: General remarks

This dataset and code was developed and used for the publication



E. Sperber, C. Schimeczek, U. Frey, K. K. Cao, V. Bertsch: Aligning heat pump operation with market signals: A win-win scenario for the electricity market and its actors? In: Energy Reports, Volume 13, June 2025, pp. 491-513, https://doi.org/10.1016/j.egyr.2024.12.028


Data description

The dataset "heat_pump_results.zip" includes all relevant results underlying the above publication. 

The data is organized according to the scenarios considered in the analysis. Therefore, each folder is labelled according to the scenario structure, starting with the building efficiency scenario ("BAU" / "EFF"), followed by the PV scenario ("no-PV" / "with-PV"), the HP operation scenario ("ModFlex_V", "ModFlex_F", "HighFlex_V"), the simulation year (2030 / 2040) and the weather year (2017 / 2019 / 2023).

Within each result directory per scenario, the data is further structured according to the results at the market level ("AMIRIS") and at the user level ("GAMS" and "INFLEX"). The "INFLEX" directory contains results for the inflexible reference operation, while the "GAMS" directory contains results for the cost-minimized heat pump operation at the level of building types. The data at the user level is further structured by location. Data is given in hourly resolution.

The scenario evaluation indicators presented in the publication, as well as other indicators, are summarized in the "MPI" directory.

Abbreviations used:



HP: heat pump

SH: space heating

DHW: domestic hot water

AW: air/water

BW: brine/water

PV: photovoltaic

Ti: indoor air temperature

Ttes: temperature of domestic hot water storage tank


Code description

The code to generate the results is given in "heat_pump_workflow.zip". Please follow the instructions in the README.md that you can find in this archive.

Conctact

Please contact Evelyn Sperber at evelyn.sperber@dlr.de if you have any questions.
DOI: 10.57967/hf/3822
title: ms_proteometools
DOI: 10.5281/zenodo.14504940
title: Moodle data
DOI: 10.5281/zenodo.14504941
title: Moodle data
DOI: 10.15468/dl.2rc7vg
title: Occurrence Download

description: A dataset containing 109017 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nicrophorus Fabricius, 1775"
 ]
}

 The dataset includes 109017 records from 774 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037479-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive114377.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive114378.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive114378.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive114379.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive114379.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive114380.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0106237.10fu
title: SH0106237.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive114380.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive114381.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.