cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27192723.v1
title: Raw data DOI 10.3389fphar.2024.1483686.zip

description: Background: The high incidence of thyroid nodules and their rapid growth in recent years have become an important issue affecting public health. Traditional Chinese medicine (TCM) external treatments have unique advantages in treating this disease, but the currently available external preparations are relatively few and the therapeutic mechanism is unclear. Jiajiejian gel (JJJG) is a TCM external preparation developed by our team for the thyroid nodule treatment, which has been preliminarily proven to be safe and effective in clinical practice. Objective: The current study was aimed to elucidate the therapeutic effects and the underlying mechanisms of JJJG on thyroid nodules in rats. Methods: The contents of paeonol and forsythoside A in JJJG were determined by HPLC. The thyroid nodules rat model was established through oral gavage of 0.1% propylthiouracil (PTU) for 6 weeks and meanwhile the rats were treated with external JJJG (0.26, 0.52, 1.04 g/kg). Subsequently, the therapeutic effect of JJJG was observed by means of ultrasonic examination, morphology observation, organ coefficients determination and histopathological analysis. Mechanismlly, the levels of FT3, FT4 and TSH in serum were measured and transcriptomics methods were used to analyse and screen the key targets and pathways of alleviating thyroid nodules by JJJG. Further, gene and protein expression levels of key factors in the pathways were measured and validated using quantitative real-time PCR, ELISA, western blotting and immunofluorescence, so as to clarify the therapeutic mechanism. Results：The contents of the paeonol and forsythoside A were 1.160 and 0.608 mg/g, respectively. JJJG reduced thyroid swelling, improved nodular lesions, decreased thyroid coefficients, and inhibited abnormal nodular hyperplasia of follicular epithelial cells. In terms of mechanism, JJJG significantly increased the levels of FT3 and FT4 and decreased TSH level in serum (P&lt;0.05). Transcriptomics suggested that the (IL-6, TNF-α, IL-1β)/JAK2/STAT3/VEGF pathway may be one of the key mechanisms in the treatment of thyroid nodules by JJJG. Further validation experiments demonstrated that JJJG significantly reduced the mRNA expression and protein content of IL-1β, IL-6 and TNF-α in thyroid tissue, as well as the mRNA expression of JAK2, STAT3 and VEGF and the protein expression of p-JAK2/JAK2, p-STAT3/STAT3 and VEGF (P&lt;0.05). Conclusions: This study indicates that JJJG efficiently ameliorates thyroid nodules by regulating the levels of FT3, FT4 and TSH in serum and suppressing (IL-6, TNF-α, IL-1β)/JAK2/STAT3/VEGF pathway in thyroid tissue, providing a potential therapeutic approach for thyroid nodules.
DOI: 10.3535/h9f-3cw-rhm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ssv-qzy-rn1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27146502.v1
title: Snail Diet Experiment Master Data

description: This is the master dataset used for the manuscript, titled “Diet of schistosome vectors influences infection outcomes”. There are five excel worksheets with data and one description worksheet that contains details on the variables used.
DOI: 10.3535/ede-gp7-qza
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/md4-53s-fzr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.4491650.v2
title: Perceived Confidence_Female Condom

description: The data contains variables that captures transactional sex, perceived confidence and perception towards usage of female condom amongst female undergraduates in selected institutions of southwestern Nigeria.
DOI: 10.3535/7r7-qgj-w1q
title: Agate

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ews-877-p90
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1128027.v1
title: data citations vs reuse-use indicators

description: ESA ignite talk 2014. Data Citations. Here is the dataset I collected for slide 19 of the talk to examine the relative efficacy of data citations to capture usage of dateasets my colleagues and I have published. Outcome: Do not capture usage. Abstract: For better or worse, citations are here stay. Citations have the capacity to serve as a proxy estimate of uptake or use by the community of ones products. Fortunately, the range of acceptable scientific products is rapidly expanding, datasets in many forms continue to serve as pivotal resources, and big data syntheses are reshaping the standards for acceptable derived evidence. Data citations are defined, general rules provided, and the unique elements of datasets described such as versioning and persistent identifiers. The cultural and scientific discovery implications of data citations are also described focusing on emerging linked-data futures.
DOI: 10.3535/sqe-hxg-ha4
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t2n-w4n-m9j
title: †Obolidae King, 1846

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hk0-w0g-pql
title: Cervus elaphus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k6w-mwp-m06
title: †Rhynchonella Fischer de Waldheim, 1809

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12286517.v2
title: Capture-history.xlsx

description: Capture history of two small cats from the paper "Population density and habitat use of two sympatric small cats in a central Indian reserve"
DOI: 10.3535/by2-w4l-7mx
title: Fimbria Megerle von Mühlfeld, 1811

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nwp-dvd-5j1
title: Belemnitella

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/4x696z6xn4
title: Dataset for: Artificial Intelligence-Based Online Control Scheme for the Regulations of Interconnected Thermal Power Systems

description: This dataset is an extension to our article titled " Artificial Intelligence-Based Online Control Scheme for the Regulations of Interconnected Thermal Power Systems." To cite the paper, use:

@article{orka2023artificial,
  title={Artificial Intelligence-Based Online Control Scheme for the Regulations of Interconnected Thermal Power Systems},
  author={Orka, Nabil Anan and Muhaimin, Sheikh Samit and Shahi, Md Nazmush Shakib and Ahmed, Ashik},
  journal={Arabian Journal for Science and Engineering},
  pages={1--24},
  year={2023},
  publisher={Springer}
}

The dataset comprises two CSV files:

"linear_thermalthermal" contains optimal PID parameters corresponding to load disturbances in both regions of a two-area interconnected power system (IPS) with non-reheat thermal turbines.

"nonlinear_hydrothermal" comprises optimum PID gains corresponding to load perturbations in both regions of a two-area hydrothermal IPS that includes nonlinearities like Generation Rate Constraint (GRC) and Governor Dead Band (GDB).

The simulation and collection of data was conducted in MATLAB 2018b. To obtain the optimal controller parameters, Newton's method inspired Gradient-Based Optimizer (GBO), GBO’s updated algorithm Enhanced Gradient-Based Optimizer (EGBO), and nature-based Marine Predators Algorithm (MPA) are employed using an Integral Time-multiplied Absolute Error (ITAE) based objective function. A brief description of different features of the dataset is described below:

Kp1: Proportional gain of the controller in area 1
Ki1: Integral gain of the controller in area 1
Kd1: Derivative gain of the controller in area 1
Kp2: Proportional gain of the controller in area 2
Ki2: Integral gain of the controller in area 2
Kd2: Derivative gain of the controller in area 2
w1: Step-change in load demands of area 1
w2: Step-change in load demands of area 2

The efficient utilization of this dataset can result in trained intelligent online controllers that can very precisely forecast the optimum controller gains in a practical setting.
DOI: 10.3535/2ak-kza-3la
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qng-x4x-689
title: †Corbicula cuneiformis (J. Sowerby, 1817)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lbs-5na-p23
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p4d-agy-grz
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/6bc7w56677
title: Data for: In-situ LA-ICP-MS and EMP trace element analyses of hematite: Insight into the geochemical signature of the Neoproterozoic Urucum Iron Formation, Brazil

description: Appendix A contains the detailed methodology. Appendix B contains EMP data, standards, and analytical conditions. Appendix C contains LA-ICP-MS data, quantitation limits, and secondary standard analyses. Appendix D contains MUQ-normalized data, ratios, and anomalies. Appendix E contains diagrams of Zr, Hf, Th, U and Pr vs Al, Ti and P. Appendix F contains factor analysis of the EMP and LA-ICP-MS data.
DOI: 10.3535/604-5pf-ca9
title: †Trigonosemus elegans Koenig, 1825

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r4m-r9y-tqs
title: †Diceras arietinum Lamarck, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/wj6fz7gt67
title: The Supporting Information

description: This is an actual case calculation model based on the paper model in 'Optimization of co-production air separation unit based on MILP under multi-product deterministic demand'.
DOI: 10.3535/cp9-q7m-p7j
title: Brachyura Latreille, 1802

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mjs-ghe-xk4
title: Olivine basalt

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20524911.v1
title: Pseudo name count

description: name count file of Pseudomonas phages
DOI: 10.3535/ly5-jkj-rw4
title: Quartz porphyry

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q1m-3vx-805
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22315194.v1
title: Influence of elite rotation on authoritarian resilience

description: This article proposes the use of the indicator of elite rotation to deepen the understanding of the phenomenon of authoritarian cooptation. The high frequency of changes in the ruling coalition can have a twofold effect on authoritarian regimes. On the one hand, it makes it possible to include new leaders in the ruling coalition in a timely fashion, remove potential opponents and maintain loyalty among the nobility. On the other hand, constant rotation creates a situation of high uncertainty and deprives some elites of access to previously received benefits. This study offers an empirical test of these assumptions: an analysis of all authoritarian regimes that existed between 1968 and 2010 (as well as all dictators who ruled between 1968 and 2008) leads to the conclusion that a low level of elite rotation generally contributes to the resilience of authoritarian regimes and leaders.
DOI: 10.6084/m9.figshare.22794125.v3
title: Supplementary Dataset 1 QUAST Assembly report

description: <strong>Supplementary Dataset 1. </strong>Quality control assemblies report using QUAST for 114 OXA-48 producing <em>K. pneumoniae </em>clinical isolates.
DOI: 10.3535/7yl-ete-dv1
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/bb5vypmbkw
title: RT3: A Windows program for the Renner–Teller analysis of Π 2 states of triatomic molecules

description: Abstract In this work we present Windows and Fortran programs which can be used for the Renner-Teller analysis of the vibronic levels of ^2 Π states of linear, triatomic molecules. The programs can do least squares fitting of term values relative to the lowest energy level within a single ^2 Π state, of combination differences between vibronic levels within a single ^2 Π state or of transitions between the levels of two different ^2 Π states. The algorithm allows for the inclusion of Renner-Teller, sp... Title of program: RT3 Catalogue Id: AEAL_v1_0 Nature of problem The vibronic levels of triatomic molecules in 2 π states are complicated by spin-orbit and vibrational-orbital angular momentum coupling (Renner-Teller) effects that make them difficult to assign and analyze. The RT3 program, available in Windows and Fortran versions, can be used to calculate the vibronic energy levels of such systems and fit experimental data to a Hamiltonian that includes Renner-Teller, spin-orbit, vibrational anharmonicity, Fermi resonance and Sears resonance effects. Versions of this program held in the CPC repository in Mendeley Data AEAL_v1_0; RT3; 10.1016/j.cpc.2007.11.017 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/43j-5s6-107
title: Pteria Scopoli, 1777

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tjg-qmz-brn
title: †Philhedra Koken, 1889

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.17306899.v1
title: A comprehensive analysis of <i>NAC</i> gene family in <i>Oryza sativa japonica:</i> a structural and functional genomics approach

description: <i>NAC</i> gene family regulates diverse aspects of plant growth and developmental processes. The NAC DNA binding domains together with cis-acting elements play inter-related roles in regulating gene expression. In this study, an <i>in silico</i> approach for genome wide analysis of <i>NAC</i> gene in <i>Oryza sativa japonica</i> lead to an identification of 11 <i>NAC</i> genes, distributed over 12 chromosomes. A detailed analysis of phylogenetic relationship, motifs, gene structure, duplication patterns, positive-selection pressure and cis-elements of 11 <i>OsNAC</i> genes were performed. Three pairs of <i>NAC</i> genes with a high degree of homology in terminal nodes were observed and were inferred to be paralogous pairs. One conserved NAC domain was analyzed in all the NAC proteins. Only one gene was studied to be intronless and the majority had 2 introns. Segmental gene duplication pattern was predominant in 11 <i>NAC</i> genes. Ka/Ks ratio of 3 pairs of segmentally duplicated gene was substantially lower than 1, suggesting that the <i>OsNAC</i> sequences are under strong purifying selection pressure. <i>NAC74</i> and <i>NAC71</i> gene showed the maximum responsiveness for several factors. The paralogous genes, <i>NAC2</i> and <i>NAC67</i> were found to have maximum mya values, respectively. They showed maximum difference amongst themselves in all the categories of responsiveness. Responsiveness towards abscisic acid was observed to be absent in <i>NAC67</i>, but present in <i>NAC2</i>, while responsiveness to meristem inducibility was observed to remain absent in <i>NAC2</i> but present in <i>NAC67</i>. These results would provide a platform for the future identification and analysis of <i>NAC</i> genes in <i>Oryza sativa japonica</i>. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.21344349.v1
title: WRRdataset

description: Dataset of "Effect of turbulent coherent motion on the onset of particle transport using synchronized 3D PIV and PTV"
DOI: 10.3535/q0e-wam-1xp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rbe-nqn-hnf
title: Quartz

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/tt7btzn6nd
title: The Effects of Extra Virgin Olive Oil and Canola Oil on Inflammatory Markers and Gastrointestinal Symptoms in Patients with Ulcerative Colitis

description: we have reported the data of a cross over clinical trial regarding to the compare the effect of extra virgin olive oil and canola oil on gastrointestinal symptoms and inflammatory markers in patients with ulcerative colitis.
DOI: 10.3535/6xl-qdx-5de
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7sa-cek-5l3
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5522/04/24236101.v1
title: Child labour prevalence in the cocoa industry in Cote d'Ivoire

description:  
The data set is the one used in the paper "Estimating the prevalence of child labour in the cocoa industry via indirect elicitation methods: A mixed-methods study" by Lepine et al. It contains data collected from 1,741 cocoa producers working in Côte d’Ivoire to estimate whether child labour prevalence could be elicited from parents using indirect elicitation methods. The data set includes child labour prevalence capturing hazardous child labour levels elicited via direct questioning versus using a list experiment and a newly developed nonverbal method called ‘colorbox’.
DOI: 10.6084/m9.figshare.26210732.v1
title: BK_chromosomes_20230418.fasta.gz

description: Genome assembly for <i>P. m. gambelii</i>
DOI: 10.17632/wjtxgw9748
title: Brazilian WelfareProgram Bolsa Familia DataAnalysis

description: Newcomb-Benford Law (NBL)-based method for fraud detection.
DOI: 10.3535/6b2-7xr-jrh
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q1k-ap3-40v
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22791218.v1
title: Source Data

description: <b>Source data for the manuscript entitled "</b><b>Self-supervised dynamic learning for long-term high-fidelity image transmission through unstabilized diffusive media</b><b>".</b>
DOI: 10.17632/5mmgrk6b6s
title: 2-Point Polarizable model of Silver and parameters

description: It is a 2-point polarizable model of silver, which brings in the instantaneous polarization effect due to induced charges, triggered by charged external agents. This phenomenon had been missing in all the literature and this model reproduces density, lattice parameters and strongly follows the classical image potential curve. Surface cleavage and water interfacial were also computed with this model and found consistent with the experimental data. Additionally, nanoindentation was also performed and the results complied with the Hertz theory. 
1. ImagePotential: It is the most vital development of this project, where the primary formulation of the two-point model is carried out and an exhibition of how the model surface responds to the presence of Sodium cation is also presented.
2.LatticeParameters& Density: The LJ parameters are tuned to find the best to match the Lattice parameters and the density.
3.SurfaceEnergy: The Primary validation is done by comparing the surface cleavage energy against the experimental.
4. InterfacialEnergy: Interactions of the developed model with water are analyzed.
5. UnitCells: It contains unit cells of the developed model.
DOI: 10.3535/7kr-9ht-dwg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nj6-9wg-2gr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.15127935.v1
title: Dataset for publication

description: Molecular docking of flavonoids as potential inhibitors of protease and helicase domains of dengue and Zika viruses
DOI: 10.3535/5vz-fdv-s8c
title: Pteria Scopoli, 1777

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9ve-bp4-d4j
title: Agate

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21517650.v1
title: Data file for "The Relative Value of AEA Economic Education Papers"

description: Data file for: J.R. Clark, Joshua Hall, and Ashley Harrison, “The Relative Value of AEA Economic Education Papers,” <em>Journal of Economics and Finance Education </em>16(3) 2017: 11-19
DOI: 10.17632/96ysgzdt2n
title: LINF_110017800

description: YidC/ALB3/OXA1/COX18-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.3535/jfe-tkc-c50
title: Basalt

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xze-tel-2v5
title: Quartzite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0f9-2xv-m7f
title: †Oriostoma Munier-Chalmas, 1876

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ahw-gxp-r2t
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3100234.v2
title: Datasets and R Code for Narock et al. DSS Paper

description: The Narock et al., 2014 study on Semantic Web Services and Provenance contained an error in the statistical analysis. A subsequent Errata was published correcting the errors. These data and associated R code were used in that study and the creation of the Errata.
DOI: 10.17632/3h96n97xrb
title: SARS-CoV-2 infection dysregulates the metabolomic and lipidomic profiles of serum. Bruzzone et al.

description: Supplementary Tables for the manuscript: Chiara Bruzzone, Maider Bizkarguenaga, Rubén Gil-Redondo, Tammo Diercks, Eunate Arana, Aitor García de Vicuña, Marisa Seco, Alexandre Bosch,5 Asís Palazón, Itxaso San Juan, Ana Laín, Jon Gil-Martínez, Ganeko Bernardo-Seisdedos, David Fernández-Ramos, Fernando Lopitz-Otsoa, Nieves Embade, Shelly Lu, José M Mato, and Oscar Millet. SARS-CoV-2 infection dysregulates the metabolomic and lipidomic profiles of serum, iScience, 2020, in press.
DOI: 10.3535/5py-vs5-ea2
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/61a-vsw-ps6
title: Tuff

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7011995.v4
title: a-Synuclein MD simulations:homo-H50Q

description: Molecular dynamics simulations of a-Synuclein amyloids, homo-H50Q
DOI: 10.3535/z46-049-z9a
title: Augusta County meteorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7w1-a8f-qm4
title: Basalt

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wdt-579-gmb
title: Basalt

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13604102.v3
title: Supplementary file 1

description: Methodology description<br>