cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8c5g9s
title: Occurrence Download

description: A dataset containing 2198 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-1.454645 51.77782, -1.454671 51.77735, -1.454736 51.77688, -1.454841 51.77642, -1.454984 51.77595, -1.455167 51.7755, -1.455388 51.77505, -1.455647 51.77461, -1.455942 51.77417, -1.456274 51.77375, -1.456641 51.77334, -1.457042 51.77294, -1.457477 51.77255, -1.457943 51.77218, -1.45844 51.77182, -1.458966 51.77148, -1.459521 51.77116, -1.460101 51.77086, -1.460706 51.77058, -1.461335 51.77031, -1.461985 51.77007, -1.462654 51.76985, -1.463341 51.76965, -1.464044 51.76947, -1.464761 51.76932, -1.46549 51.76919, -1.466229 51.76908, -1.466976 51.769, -1.467729 51.76894, -1.468486 51.76891, -1.469244 51.7689, -1.470003 51.76891, -1.470759 51.76895, -1.47151 51.76902, -1.472255 51.76911, -1.472991 51.76922, -1.473717 51.76936, -1.474431 51.76952, -1.475129 51.7697, -1.475812 51.76991, -1.476476 51.77014, -1.47712 51.77038, -1.477742 51.77065, -1.478341 51.77094, -1.478914 51.77125, -1.479461 51.77158, -1.479979 51.77192, -1.480468 51.77228, -1.480925 51.77266, -1.481351 51.77305, -1.481743 51.77345, -1.4821 51.77386, -1.482422 51.77429, -1.482707 51.77473, -1.482955 51.77517, -1.483166 51.77562, \n -1.483337 51.77608, -1.48347 51.77655, -1.483564 51.77701, -1.483618 51.77748, -1.483633 51.77795, -1.483608 51.77842, -1.483543 51.77889, -1.483438 51.77936, -1.483295 51.77982, -1.483112 51.78028, -1.482892 51.78073, -1.482633 51.78117, -1.482338 51.7816, -1.482006 51.78203, -1.48164 51.78244, -1.481238 51.78284, -1.480804 51.78323, -1.480338 51.7836, -1.479841 51.78395, -1.479315 51.78429, -1.47876 51.78461, -1.47818 51.78492, -1.477574 51.7852, -1.476946 51.78546, -1.476296 51.78571, -1.475626 51.78593, -1.474939 51.78613, -1.474236 51.78631, -1.473518 51.78646, -1.472789 51.78659, -1.47205 51.7867, -1.471303 51.78678, -1.470549 51.78684, -1.469792 51.78687, -1.469034 51.78688, -1.468275 51.78686, -1.467519 51.78682, -1.466767 51.78676, -1.466022 51.78667, -1.465285 51.78656, -1.464559 51.78642, -1.463845 51.78626, -1.463146 51.78608, -1.462464 51.78587, -1.461799 51.78564, -1.461155 51.78539, -1.460533 51.78512, -1.459934 51.78483, -1.459361 51.78453, -1.458814 51.7842, -1.458296 51.78386, -1.457807 51.7835, -1.45735 51.78312, -1.456925 51.78273, -1.456533 51.78233, -1.456176 51.78191, -1.455854 51.78149, -1.455569 51.78105, -1.455321 51.7806, -1.455111 51.78015, -1.454939 51.77969, -1.454807 51.77923, -1.454713 51.77876, -1.454659 51.77829, -1.454645 51.77782))"
 ]
}

 The dataset includes 2198 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005208-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.scmnyc
title: Occurrence Download

description: A dataset containing 3035 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Bipes biporus (Cope, 1894)"
 ]
}

 The dataset includes 3035 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000491-171113114016250/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axvdmp
title: Occurrence Download

description: A dataset containing 119527 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Salix viminalis L., Melilotus indicus (L.) All.)"
 ]
}

 The dataset includes 119527 records from 915 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192859-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lfiwix
title: Occurrence Download

description: A dataset containing 363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Thuidium kanedae Sakurai",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 363 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000491-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2uqxx9
title: Occurrence Download

description: A dataset containing 283 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spilomantis occipitalis (Westwood, 1889)"
 ]
}

 The dataset includes 283 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060183-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.44xw4k
title: Occurrence Download

description: A dataset containing 61298 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Données d'occurrences issues des Formulaires standards de données des sites Natura 2000 - Données d'occurrence Espèces issues de la base Natura 2000 : espèces d'intérêt communautaire et autres espèces remarquables renseignées dans les FSD"
 ]
}

 The dataset includes 61298 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284889-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bvs9qh
title: Occurrence Download

description: A dataset containing 181 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alchemilla pedata Hochst. ex A.Rich."
 ]
}

 The dataset includes 181 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005233-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3fy9hp
title: Occurrence Download

description: A dataset containing 338 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lysmata amboinensis (De Man, 1888)"
 ]
}

 The dataset includes 338 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003535-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gs8s6k
title: Occurrence Download

description: A dataset containing 66248 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Atlantic and Gulf Rapid Reef Assessment -Benthic (OBIS Australia)"
 ]
}

 The dataset includes 66248 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000492-150204170955391/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brn9tq
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dicksonia grandis Rosenst."
 ]
}

 The dataset includes 65 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021714-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.30bpjl
title: Occurrence Download

description: A dataset containing 120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Citrus limon (L.) Burm.f.",
 "Country is United States of America"
 ]
}

 The dataset includes 120 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000492-150210113312293/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ynjhxp
title: Occurrence Download

description: A dataset containing 651375 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Serbia",
 "License is one of (CC0 1.0, CC-BY 4.0)"
 ]
}

 The dataset includes 651375 records from 490 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060195-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8znbjs
title: Occurrence Download

description: A dataset containing 329 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apteryx Shaw, 1813",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((157 -47,157 -32,180 -32,180 -47,157 -47))",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation"
 ]
 }
 ]
}

 The dataset includes 329 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000492-150216165555722/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ercpf
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Enemion stipitatum (A.Gray) J.R.Drumm. & Hutch."
 ]
}

 The dataset includes 220 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0192872-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12750690
title: Raws for battery tests

description: Raws as input
DOI: 10.5281/zenodo.14276923
title: PTM-compass workflow

description: These files serve as the input files required for executing the PTM-Compass workflow (https://github.com/CNIC-Proteomics/PTM-compass).

The most common approach to running this workflow is through the Nextflow pipeline (https://github.com/CNIC-Proteomics/nf-PTM-compass).

The samples are derived from the study by Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. (*), with results obtained from the open search conducted using MSFragger.



test_Heteroplasmic_muscle.zip: Inputs for the PTM-compass test using MSFragger results (open search) for heteroplasmic mouse muscle tissue


 

(*) Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. Comprehensive Quantification of the Modified Proteome Reveals Oxidative Heart Damage in Mitochondrial Heteroplasmy. Cell Rep. 2018;23(12):3685-3697.e4. doi:10.1016/j.celrep.2018.05.080
DOI: 10.5281/zenodo.15065933
title: Samples for CNIC-Proteomics Nextflow pipelines: nf-PTM-compass

description: We present several input sample files for the execution of various Nextflow pipelines developed by the Cardiovascular Proteomics Lab/Proteomics Unit at the National Centre for Cardiovascular Research (CNIC, https://www.cnic.es).

The nf-PTM-compass enhances the identification and quantification of Post-Translational Modifications (PTMs) (https://github.com/CNIC-Proteomics/nf-PTM-compass).

The available sample files are as follows:



nf-PTM-compass_Heteroplasmic_Heart.zip: Heart tissue. Input files for nf-PTM-compass, derived from the study by Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. (*), with results from an open search conducted using nf-SearchEngine results.

nf-PTM-compass_Heteroplasmic_Liver.zip: Liver tissue. Input files for nf-PTM-compass, derived from the same study (*), with results from an open search conducted using nf-SearchEngine results.

nf-PTM-compass_Heteroplasmic_Muscle.zip: Mucle tissue. Input files for nf-PTM-compass, derived from the same study (*), with results from an open search conducted using nf-SearchEngine results.


 

(*) Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. Comprehensive Quantification of the Modified Proteome Reveals Oxidative Heart Damage in Mitochondrial Heteroplasmy. Cell Reports. 2018;23(12):3685-3697.e4. doi:10.1016/j.celrep.2018.05.080
DOI: 10.5281/zenodo.14387521
title: PTM-compass workflow

description: These files serve as the input files required for executing the PTM-Compass workflow (https://github.com/CNIC-Proteomics/PTM-compass).

The most common approach to running this workflow is through the Nextflow pipeline (https://github.com/CNIC-Proteomics/nf-PTM-compass).

The samples are derived from the study by Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. (*), with results obtained from the open search conducted using MSFragger.



test_Heteroplasmic_muscle.zip: Inputs for the PTM-compass test using MSFragger results (open search) for heteroplasmic mouse muscle tissue


 

(*) Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. Comprehensive Quantification of the Modified Proteome Reveals Oxidative Heart Damage in Mitochondrial Heteroplasmy. Cell Rep. 2018;23(12):3685-3697.e4. doi:10.1016/j.celrep.2018.05.080
DOI: 10.5281/zenodo.14446572
title: Samples for CNIC-Proteomics Nextflow pipelines

description: We present several input sample files for the execution of various Nextflow pipelines developed by the Cardiovascular Proteomics Lab/Proteomics Unit at the National Centre for Cardiovascular Research (CNIC, https://www.cnic.es).

The list of developed Nextflow pipelines includes:



nf-PTM-compass: Enhances the identification and quantification of Post-Translational Modifications (PTMs) (https://github.com/CNIC-Proteomics/nf-PTM-compass).

nf-SearchEngine: Executes the MSFragger search engine for peptide identification (https://github.com/CNIC-Proteomics/nf-SearchEngine).


The available sample files are as follows:



nf-PTM-compass_Heteroplasmic_Muscle.zip: Input files for nf-PTM-compass, derived from the study by Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. (*), with results from an open search conducted using MSFragger.

nf-SearchEngine_Heteroplasmic_Muscle.zip: Input files for nf-SearchEngine, derived from the same study, including Thermo raw files and other data.


 

(*) Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. Comprehensive Quantification of the Modified Proteome Reveals Oxidative Heart Damage in Mitochondrial Heteroplasmy. Cell Reports. 2018;23(12):3685-3697.e4. doi:10.1016/j.celrep.2018.05.080
DOI: 10.5281/zenodo.15182537
title: Samples for CNIC-Proteomics Nextflow pipelines: nf-PTM-compass

description: We present several input sample files for the execution of various Nextflow pipelines developed by the Cardiovascular Proteomics Lab/Proteomics Unit at the National Centre for Cardiovascular Research (CNIC, https://www.cnic.es).

The nf-PTM-compass enhances the identification and quantification of Post-Translational Modifications (PTMs) (https://github.com/CNIC-Proteomics/nf-PTM-compass).

The available sample files are as follows:



heteroplasmic_heart.zip: Heart tissue. Input files for nf-PTM-compass, derived from the study by Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. (*), with results from an open search conducted using nf-SearchEngine results.

heteroplasmic_liver.zip: Liver tissue. Input files for nf-PTM-compass, derived from the same study (*), with results from an open search conducted using nf-SearchEngine results.

heteroplasmic_muscle.zip: Mucle tissue. Input files for nf-PTM-compass, derived from the same study (*), with results from an open search conducted using nf-SearchEngine results.


 

(*) Bagwan N, Bonzon-Kulichenko E, Calvo E, et al. Comprehensive Quantification of the Modified Proteome Reveals Oxidative Heart Damage in Mitochondrial Heteroplasmy. Cell Reports. 2018;23(12):3685-3697.e4. doi:10.1016/j.celrep.2018.05.080
DOI: 10.15468/ekhesg
title: Flora vascular de la Sierra de las Candelas, Municipio Jerez de García Salinas, Zacatecas, México

description: La Sierra de las Candelas se ubica en la región central del estado de Zacatecas, cerca de El Cargadero, población del municipio de Jerez de García Salinas. Forma parte de una estribación de la Sierra Madre Occidental que incluye la Sierra de Cardos. Se propone elaborar un catálogo de las plantas vasculares que habitan en el área. Para elaborar el catálogo se usará como fuente principal los ejemplares recolectados, también se incluirán los especimenes que se citan en la bibliográficas y la revisión de ejemplares provenientes del sitio de estudio depositados en los principales herbarios del país. El trabajo pretende contribuir a que se tomen las medidas necesarias para conservar los paisajes vinculados a la ruta sagrada de los Huicholes a Huiricuta, Real de Catorce, San Luis Potosí y la biodiversidad de una área de distribución natural de águila real (Aquila chrysaetos).Reino: 1
Filo: 1
Clase: 4
Orden: 47
Familia: 147
Género: 728
Subgénero: 14
Especie: 1862
Epitetoinfraespecifico: 225
DOI: 10.15468/dl.8pht37
title: Occurrence Download

description: A dataset containing 2187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sciurus deppei Peters, 1863"
 ]
}

 The dataset includes 2187 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000732-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ethstk
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (NE, DD, LC, NT, VU, EN, CR, EW, EX)",
 "OccurrenceStatus is Present",
 "TaxonKey is Dermatemydidae"
 ]
}

 The dataset includes 22 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000734-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hss8wd
title: Occurrence Download

description: A dataset containing 1365 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Chelonia mydas (Linnaeus, 1758)",
 "Year 2015-2025"
 ]
}

 The dataset includes 1365 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000735-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/oowjxl
title: Herpetofauna de las sierras La Candela, Jerez de García Salinas y El Mastrante

description: Pese a que México es un país megadiverso, aún existen varias regiones de las cuales no existe información sobre su diversidad biológica. El presente proyecto tiene por objetivo elaborar el inventario herpetofaunístico de las Sierras Las Candelas-Jerez de García-El Mastrante y zonas intermedias localizadas en los estados de Zacatecas y San Luis Potosí. Ambas regiones pertenecen a las provincias fisiográficas de la Sierra Madre Occidental y la Mesa Central, se caracterizan por presentar ecosistemas en buen estado de conservación y que han sido escasa o nulamente estudiados. Se obtendrá una base de datos con un total de 1150 registros los cuales corresponderán a 1000 ejemplares de anfibios y reptiles colectados y 150 ejemplares contenidos en colecciones herpetológicas de México y el extranjero, los cuales serán contenidos en BIOTICA 5.0 así como ejemplares contenidos en bases de datos de colecciones de México y el extranjero. Las bases de datos contendrán registros de por lo menos 13 especies de anfibios y 18 especies de reptiles. Se generarán al menos 13 mapas de distribución de especies de anfibios y 30 mapas de distribución de de reptiles, desarrollados en el GIS ArcMap 10.0 siguiendo los lineamientos establecidos por la CONABIO. Se obtendrán fotografías de todas las especies de anfibios y reptiles. Con las bases de datos obtenidas a partir del presente proyecto se incrementará al menos un 100% los registros contenidos en las bases de datos de la CONABIO de anfibios y reptiles para Zacatecas. De igual forma, dichas bases contendrá al menos 84 sitios de colecta situadas en siete Áreas de Protección de Recursos Naturales Zona Protectora Forestal con decreto federal y una Región Terrestre Prioritaria. Al término del proyecto podrá evaluarse la riqueza biológica de anfibios, reptiles de la Sierras las Candelas, Jerez de García y El Mastrante junto con aquellas regiones intermedias carentes de inventarios herpetofaunísticos, esto permitirá obtener un panorama general de la diversidad biológica de las regiones mencionadas.Reino: 1
Filo: 1
Clase: 2
Orden: 4
Familia: 19
Género: 29
Especie: 41
Epitetoinfraespecifico: 9
DOI: 10.60520/ieda/113734
title: Puig Jordà monogenetic volcano and Bosc de Tosca lava flow (Garrotxa Volcanic Field, Spain) EPMA data (olivine, pyroxene, and spinel)

description: Olivine, pyroxene and spinel EPMA analyses from samples collected at the Puig Jordà monogenetic volcano and Bosc de Tosca lava flow (Garrotxa Volcanic Field, Spain).
DOI: 10.25318/4610008801-eng
title: Rural Canada Housing Profiles, values of investments in residential building construction, by type of residential building and type of work

description: This table provides data on values of investments in residential building construction by type of residential building and type of work.
DOI: 10.15468/dl.hb3vtj
title: Occurrence Download

description: A dataset containing 944753 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-96.47918 19.10365,-93.67249 18.31453,-91.76999 20.78214,-91.98125 21.12682,-95.31692 21.20465,-96.53999 21.56046,-96.47918 19.10365))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 944753 records from 604 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000708-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aadkz9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Ramphastos tucanus",
 "HasCoordinate is true",
 "Year is 2024"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000736-250402121839773/datasets/export for details.
DOI: 10.34847/nkl.ac2ca83f
title: Répertoire pages littéraires Wattpad

description: Pages web de création littéraire Wattpad
description: Répertoire de pages Wattpad littéraires