cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6539577
title: Raw data for 'Analysing binding stoichiometries in NMR titration experiments using Monte Carlo simulation and resampling techniques'

description: Repository of the raw data and SupraFit binaries (for Windows, Linux and macOS) for the research article: <strong>Analysing binding stoichiometries in NMR titration experiments using Monte<br> Carlo simulation and resampling techniques</strong> It contains the SupraFit nigthly builds 2.5.98 for Windows (<em>SupraFit-nightly-2.5.98-x86_x64-Windows.zip</em>), Linux (<em>SupraFit-nightly-2.5.98-x86_64-Linux.tar.gz</em>) and macOS (<em>SupraFit-nightly-2.5.98-macOS.dmg</em>). <em>Simulated Experiments.suprafit</em> contains the simulated experimental data <em>Simulated 1_1 Experiment.suprafit</em> contains the raw data of the 1:1 data set after several statistical post-processing analyses were performed <em>Simulated 1_1_1_2 Experiment.suprafit</em> contains the raw data of the 1:1/1:2 data set after several statistical post-processing analyses were performed <em>Simulated 2_1_1_1 Experiment.suprafit </em>contains the raw data of the 2:1/1:1 data set after several statistical post-processing analyses were performed <em>Simulated 2_1_1_1_1_2 Experiment.suprafit </em>contains the raw data of the 2:1/1:1/1:2 data set after several statistical post-processing analyses were performed <em>MC-simulation 1_1_1_2 Experiment.suprafit </em>contains the raw data for Figure 4 in the article
DOI: 10.5517/ccdc.csd.cc21n260
title: CCDC 1896121: Experimental Crystal Structure Determination

description: Related Article: Samuele Fanetti, Marcelo M. Nobrega, Kamil Dziubek, Margherita Citroni, Andrea Sella, Paul F. McMillan, Michael Hanfland, Roberto Bini|2019|CrystEngComm|21|4493|doi:10.1039/C8CE02154F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21299586
title: Dataset 1.xlsx

description: Data for Figures 5, 6 and 7
DOI: 10.17632/xvd7bv6mjb.5
title: Data, methodology and result for estimating sustainability spillover effects between and within two regions

description: The three files are as follows:
1- Appendix Figures: it shows the response functions of the VAR estimations.
2- Appendix Tables: it represents all the estimations, results, coefficients and statistics, in details. 
3- Data: it includes all the data for sustainable development pillars (including life expectancy, CO2 emissions per capita and GDP per capita for all the global regions. All the data are the normalized values of their natural logarithm as described in methodology.
4- EViews-Work-File: it is the working file for the software which estimates the models (i.e., EViews software).
5- Methodology in details: it describes how the model is estimated for two regions "i" and "j".
DOI: 10.18112/openneuro.ds000113.v1.3.0
title: Forrest Gump
DOI: 10.18112/openneuro.ds001499.v1.3.1
title: BOLD5000
DOI: 10.5281/zenodo.7038365
title: Environmental morphing enables informed dispersal of the dandelion diaspore

description: This repository contains source data for the following preprint: Seale M, Zhdanov O, Soons MB, Cummins C, Kroll E, Blatt MR, Zare-Behtash H, Busse A, Mastropaolo E, Bullock JM, Viola IM, Nakayama N (2022) Environmental morphing enables informed dispersal of the dandelion diaspore, bioRxiv, https://doi.org/10.1101/542696
DOI: 10.6084/m9.figshare.21590610
title: Supplementary Material for: FOCAL LASER PHOTOCOAGULATION FOR CENTRAL SEROUS CHORIORETINOPATHY IN UNDER-REPRESENTED POPULATIONS: A RETROSPECTIVE CASE SERIES

description: This case series examines visual and anatomic outcomes of focal laser photocoagulation in the treatment of central serous chorioretinopathy (CSCR) with subretinal fluid (SRF) in under-represented populations. We reviewed records of 25 eyes with CSCR with SRF that underwent focal laser photocoagulation. Visual acuity (VA) and central macular thickness (CMT) were recorded prior to laser, after laser treatment, and at final follow up and were all compared using Wilcox Signed Rank tests after using Shapiro-Wilk tests to determine normality. The racial and ethnic breakdown of our cohort (n=25) includes 64% Hispanic (n=16), 20% Black (n=5), 12% Asian (n=3), 4% Other (n=1). Patients were followed for a median of 15.5 months (range: 5.75–87 months) after treatment. The VA prior to laser compared to best-available VA significantly improved (p=0.0003). Pre­laser CMT to post-laser CMT (p&lt;0.0001) and pre­laser CMT to final CMT (p&lt;0.0001) significantly improved. Excluding the one eye that developed a choroidal neovascular membrane, the pre-laser VA to final VA improved significantly (p=0.0047) as well as pre-laser CMT to final CMT (p&lt;0.0001). Of the 25 eyes, 4 had persistent SRF following laser, and of the 21 eyes with complete resolution of SRF, 2 developed recurrent SRF. Focal laser photocoagulation can significantly improve VA and CMT in CSCR with active SRF in patients who have been under-represented in prior clinical studies.
DOI: 10.6084/m9.figshare.21601545
title: Supplementary Material for: A case of pigment dispersion syndrome after placement of sulcus intraocular lens with 7-mm optic diameter after posterior capsule rupture

description: A 48-year-old woman diagnosed with primary angle closure suspect (PACS) in the right eye underwent cataract surgery, and a 7-mm optic diameter intraocular lens (IOL) was placed in the ciliary sulcus after intraoperative posterior capsule rupture. The patient developed uveitis and blurred vision the next day. The IOL was fixed between the iris and the anterior capsule. Irregularly shaped pupils due to posterior synechia and pigmentation on the IOL surface were observed. In the Scheimpflug image, the IOL on the anterior capsule was observed and the anterior chamber depth was 2.92 mm. A diagnosis of pigment dispersion syndrome and elevated intraocular pressure due to sulcus IOL placement was made. The patient underwent intrascleral IOL fixation surgery using an already inserted IOL to reposition the IOL under the anterior capsule. After one week, the blurred vision, anterior chamber inflammation, and IOL surface pigmentation were resolved. The right eye IOP was 15 mmHg and the pupil became a regular circle. Scheimpflug images showed the IOL located behind the anterior capsule and an anterior chamber depth of 3.88 mm. Because the patient had a slightly shorter axial length of 22.89 mm and PACS, pigment dispersion may have occurred due to friction between the iris and the shape of the optic edge with a large optic diameter. In cases of posterior capsule rupture with short axial length and PACS, the use of a 7-mm optic diameter IOL in the sulcus should be avoided, or intrascleral IOL fixation should be selected as the surgical technique.
DOI: 10.6084/m9.figshare.21621255
title: Supplementary Material for: Diagnosis and treatment of brown tumor in the femur induced by parathyroid carcinoma: a case report

description: Brown tumors are rare destructive bone lesions caused by hyperparathyroidism. As their clinical symptoms, radiographic findings, and laboratory results closely mimic those of metastatic tumors or multiple myeloma, the diagnosis may often be mistaken. We report a case of a 61-year-old woman with brown tumors in both femurs due to parathyroid carcinoma. The patient presented with multiple osteolytic lesions that caused pain in the right thigh. Whole-body computed tomography (CT), including the neck, suspected a parathyroid tumor, and a biopsy of the bone lesion revealed no malignancy. Following parathyroidectomy, she was diagnosed with a brown tumor with hyperparathyroidism due to a very rare parathyroid carcinoma. Although the right femoral lesion was indicated as an impending fracture, conservative treatment was performed because of the instability of her general condition after parathyroidectomy and her wishes. Bone remodeling of the right femur progressed, and the patient was ambulatory; however, 9 months postoperatively, the patient fell, developed a pathological fracture, and underwent internal fixation. When multiple osteolytic bone lesions are present, CT imaging of the neck should be performed to determine the possibility of a brown tumor due to parathyroid disease. Bone lesions of brown tumors are known to be naturally cured after treatment for hyperparathyroidism. However, when the lesion of a brown tumor in the femur is an impending fracture, prophylactic internal fixation is recommended aggressively if the patient’s general condition permits.
DOI: 10.6084/m9.figshare.21628481
title: Supplementary Material for: Structured Pre-Consultation Interview at the First Call of Caregiver Regarding Memory Consultation: Effects on Caregiver Burden, Expectations, and Quality of Life

description: <b><i>Introduction:</i></b> Case managers can guide caregivers during their search for care for relatives with neurocognitive disorders. The present study aimed to evaluate the effects of this procedure on caregiver burden and quality of life. <b><i>Methods:</i></b> Family caregivers searching for care at a memory clinic before the first consultation were provided written information and they provided verbal consent to participate in this pre-post intervention study. Intervention was a structured pre-consultation phone call interview given by the case manager to inform and organize individualize pathway of care. The mini-Zarit Burden Interview and the EuroQol five-dimensional questionnaire quality of life scores were recorded by an independent assessor before the intervention and 1 month thereafter. An expectation questionnaire was also completed during the assessments. The pre and post scores were compared using the Wilcoxon signed-rank test. <b><i>Results:</i></b> In total, 45 participants were enrolled and 35 were assessed twice. There was no significant change in the total mini-Zarit Burden Interview score; however, the levels of stress due to caring and meeting familial responsibilities (<i>p</i> = 0.025), and the fear of what the future holds for the participants’ relative (<i>p</i> = 0.01) was lower at 1 month. The need for information about the pathways of care decreased, but no change in support satisfaction was observed. Quality of life was good and did not change. <b><i>Conclusions:</i></b> During the pre-consultation intervention, the case manager may fulfill several needs of caregivers, particularly to obtain personalized information, which should be implemented in memory clinics.
DOI: 10.35111/cqpa-a498
title: Web 1T 5-gram Version 1

description: <h3>Introduction</h3><br>
<p>Web 1T 5-gram Version 1 was contributed by Google Inc. and contains English word n-grams and their observed frequency counts for approximately 1 trillion tokens. The length of the n-grams ranges from unigrams (single words) to five-grams. This data is expected to be useful for statistical language modeling, e.g., for machine translation or speech recognition, as well as for other uses.</p><br>
<h3>Data</h3><br>
<p>The n-gram counts were generated from text taken from publicly accessible Web pages.</p><br>
<p>The input encoding of documents was automatically detected, and all text was converted to UTF-8. The data was tokenized in a manner similar to the tokenization of the Wall Street Journal portion of the Penn Treebank. Notable exceptions include the following:</p><br>
<ul><br>
<li>Hyphenated word are usually separated, and hyphenated numbers usually form one token.</li><br>
<li>Sequences of numbers separated by slashes (e.g. in dates) form one token.</li><br>
<li>Sequences that look like urls or email addresses form one token.</li><br>
</ul><br>
<p>The files total 24 GB compressed (gzip'ed) text files containing the following:</p><br>
<table><br>
<tbody><br>
<tr><br>
<td>Tokens</td><br>
<td>1,024,908,267,229</td><br>
</tr><br>
<tr><br>
<td>Sentences</td><br>
<td>95,119,665,584</td><br>
</tr><br>
<tr><br>
<td>Unigrams</td><br>
<td>13,588,391</td><br>
</tr><br>
<tr><br>
<td>Bigrams</td><br>
<td>314,843,401</td><br>
</tr><br>
<tr><br>
<td>Trigrams</td><br>
<td>977,069,902</td><br>
</tr><br>
<tr><br>
<td>Fourgrams</td><br>
<td>1,313,818,354</td><br>
</tr><br>
<tr><br>
<td>Fivegrams</td><br>
<td>1,176,470,663</td><br>
</tr><br>
</tbody><br>
</table><br>
<h3>Samples</h3><br>
<p>For an example of the 3-gram data in this corpus, please review this <a href="desc/addenda/LDC2006T13.3gm.txt">text sample (TXT)</a>.</p><br>
<p>For an example of the 4-gram data in this corpus, please review this <a href="desc/addenda/LDC2006T13.4gm.txt">text sample (TXT)</a>.</p><br>
<h3>Updates</h3><br>
<p>None at this time.</p></br>
Portions © 2006 Google Inc., © 2006 Trustees of the University of Pennsylvania
DOI: 10.6084/m9.figshare.21628472
title: Supplementary Material for: Tip Lesion Variant of Focal and Segmental Glomerulosclerosis in a COVID-19 Patient

description: Acute kidney injury is a common complication of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection. Several pathologic findings are continually being reported, showing a probably multifactorial etiology. The authors present a case of a patient diagnosed with a tip lesion variant of focal segmental glomerulosclerosis (FSGS) in the setting of COVID-19. A 43-year-old African American female with no known renal disease presented to the emergency department with a 6-day history of fatigue, headache, hypoageusia, myalgia, cough, nausea, and vomiting. Laboratory tests confirmed SARS-CoV-2 infection. During hospitalization, there was a progressive decline in kidney function and evidence of nephrotic-range proteinuria without nephrotic syndrome. Biopsy specimen showed a tip lesion variant of FSGS. Genetic test revealed a homozygous variant of uncertain clinical significance (c.397G&gt;A [p.V133M]) in the <i>epithelial membrane protein 2</i> (<i>EMP2</i>) gene. To our knowledge, this is the first case report of a tip lesion in a COVID-19 patient with no renal history. More studies are warranted to define susceptible groups and identify the detailed mechanisms of COVID-19-related kidney disease that would allow for specific management of this complication.
DOI: 10.17632/xvd7bv6mjb.3
title: Data, methodology and result for estimating sustainability spillover effects between and within two regions

description: The three files are as follows:
1- Appendix Figures: it shows the response functions of the VAR estimations.
2- Appendix Tables: it represents all the estimations, results, coefficients and statistics, in details. 
3- Data: it includes all the data for sustainable development pillars (including life expectancy, CO2 emissions per capita and GDP per capita for all the global regions. All the data are the normalized values of their natural logarithm as described in methodology.
4- EViews-Work-File: it is the working file for the software which estimates the models (i.e., EViews software).
5- Methodology in details: it describes how the model is estimated for two regions "i" and "j".
DOI: 10.17632/ybfvpgvvsj.4
title: Code and data for "Two-stage Variational Mode Decomposition and Support Vector Regression for Streamflow Forecasting"

description: This data repository contains code and data for the research article “Two-stage Variational Mode Decomposition and Support Vector Regression for Streamflow Forecasting”, which is currently under review for the journal Hydrology and Earth System Sciences (HESS). The underlying data of this study is the monthly runoff data sets (from Jan 1953 to Dec 2018) of Huaxian, Xianyang, and Zhangjiashan stations, Wei River, China, which is organized in "time_series" directory. The unit of measurement is 10^8m^3/s. The fundamental code for decomposing runoff data, deciding input predictors and output target, generating machine learning samples, building Autoregressive moving average (ARIMA), support vector regression (SVR), Backpropagation neural network (BPNN), and Long short-term memory (LSTM) models, and evaluating the model performance is organized in the “tools” directory. The execution code for forecasting different runoff series using different decomposition algorithms (e.g., variational mode decomposition (VMD), ensemble empirical mode decomposition (EEMD), discrete wavelet transform (DWT), Singular spectrum analysis (SSA) or non-decomposition-based (Orig)) are organized in “projects” directory (e.g., “huaxian_vmd/projects/”). To reproduce the results of this paper, follow the instructions given in readme.md. Note that the same results demonstrated in this paper cannot be reproduced but similar results should be reproduced.
DOI: 10.5281/zenodo.4536641
title: Collection of in situ monitoring data in the Southern California Bight 1950-2017 for model validation

description: This set of oceanic monitoring surveys represent 1950-2017 monitoring data in the Southern California Bight used for model validation in (Kessouri et al 2020, and Deutsch et al, 2020). The data come from (1) the California Cooperative Oceanic Fisheries Investigations (CalCOFI) program, initiated in the 1950s, samples the SCB quarterly each year, collecting hydrographic and biogeochemical measurements in coordination with the Southern California Coastal Ocean Observing System (SCCOOS). These observations are augmented nearshore by (2) quarterly surveys of nearshore water column and benthic parameters conducted collaboratively since 1990 by POTW agencies as a part of their regulatory monitoring requirements. These programs provide good temporal and geographical coverage of both the offshore (CalCOFI) and nearshore (POTW) areas, coinciding with the model period, and include publicly available water quality data for targeted sites measured quarterly. The collection includes High Frequency Radar data from the database of the University of California, San Diego (https://hfrnet-tds.ucsd.edu/thredds/catalog.html). We validated model output against observed temperature, dissolved oxygen, nitrate, ammonium, chlorophyll, carbon-system parameters (pH and aragonite saturation state), primary production, and nitrification (McLaughlin et al, 2020).
DOI: 10.5281/zenodo.5886987
title: Pub environment

description: An audio-visual model a pub in Oldenburg, Germany. The model has been created for a highly accurate acoustic rendering over loudspeaker arrays and headphones and for visual representation in virtual reality. The package encompasses an accurate spatial geometric model of the pub, which can be used for acoustic simulations, and a visual model for virtual reality. It further includes a definition of an acoustic scene for the purpose of audiology and hearing research together with the associated measurements of the acoustic impulse responses using a binaural recording system (binaural room impulse responses), a tetrahedral and omnidirectional microphones. The 3D model was developed by Maartje Hendrikse.
description: Funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Projektnummer 352015383 – SFB 1330, Project B1
DOI: 10.5281/zenodo.6025631
title: Underground station environment

description: An audio-visual model for virtual reality of the Munich underground station Theresienstraße. The model has been created for a highly accurate acoustic rendering over loudspeaker arrays and headphones and for visual representation in virtual reality. The package encompasses a highly accurate spatial geometric model of the underground station, which can be used for acoustic simulations, and a visual model for virtual reality. Both models has been calibrated to a 3D laser scan of the environment. It further includes a definition of two acoustic scenes for the purpose of audiology and hearing research together with the associated measurements of the acoustic impulse responses using a binaural recording system (binaural room impulse responses), a spherical microphone array, and omnidirectional microphones. Further measurements include HRTF measurements and anechoic measurements of the directivity of the sound source.
description: Funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Projektnummer 352015383 – SFB 1330, Project C5.
description: {"references": ["\u013d. Hl\u00e1dek, S. D. Ewert, and B. U. Seeber, \"Communication conditions in virtual acoustic scenes in an underground station,\" in Proc. International Conference on Immersive and 3D Audio, 8-10 September 2021, Bologna, Italy, 2021 [Online]. Available: http://arxiv.org/abs/2106.15916"]}
DOI: 10.13026/vc0e-th79
title: WiDS (Women in Data Science) Datathon 2020: ICU Mortality Prediction

description: WiDS (Women in Data Science) Datathon 2020: ICU Mortality Prediction focuses on patient health through data from MIT’s GOSSIS (Global Open Source Severity of Illness Score) initiative. Brought to you by the Global WiDS team, the West Big Data Innovation Hub, and the WiDS Datathon Committee, this year’s datathon is launching on Kaggle: bit.ly/WiDSdatathon2020kaggle.
DOI: 10.17608/k6.auckland.5086654
title: obis_2009_c-sq_all species.csv

description: The first column of the file is a list of 65,056 marine species obtained from the Ocean Biogeographic Information System (OBIS) in 2009. The subsequent 2,056 columns are 5-degree latitude-longitude cells in which the species is present (1) or absent (0). The cells are labelled using the C-Squares notation system.
DOI: 10.17632/hv762x5dkz.3
title: Digital Surface Models, and Ground Displacement maps (E-W, N-S, and vertical) for the 2013 Mw7.7 Baluchistan, Pakistan, earthquake.

description: The files contain the pre- and post-event Digital Surface Models (DSMs), and the ground displacement maps (east-west, north-south and vertical components) for a 30-km long area of the 2013 Baluchistan earthquake rupture (Pakistan, Mw7.7). Original data are at 0.5 m ground resolution. For this repository, the ground displacement maps were resampled at 1 m, and the DSMs at 2 m. Georeferencing is in UTM. 
Description of the data, methods and results is available at:  Antoine, S. L., Klinger, Y., Delorme, A., & Gold, R. D. (2022). Off-fault deformation in regions of complex fault geometries: The 2013, Mw7.7, Baluchistan rupture (Pakistan). Journal of Geophysical Research: Solid Earth, 127, e2022JB024480. https://doi.org/10.1029/2022JB024480.
DOI: 10.21954/ou.rd.12927464
title: Dataset for a study exploring melodic similarity and contrast using a Digital Tabletop

description: Data for paper:<br><b>Sketching Music: exploring melodic similarity and contrast using a Digital Tabletop</b><b><br></b>We conducted a study in which participants explored and developed their understanding of similarity and contrast in relation to melody. We present the data collected with three of the participants. Each participant went through an initial discussion about similarity and contrast, to become aware of their own understanding of the terms. This is reflected in the Interview section. Then we asked them to classify three related melodies by whether they were pairwise similar or contrasting with each other. We used a simple inside-similar vs outside-contrasting representation on an interactive digital tabletop, and the outcomes are reflected in the Listening and classification section. The participants then engaged in an increasingly open-ended melody composition exercise in which we asked them to use alternatively similarity and contrast to complete some short melodies using alternatively similarity and contrast, and to describe their process and feelings about the resulting melodies. This is reflected in the Challenge-response and Fill-the-gaps sections. Lastly, we asked our participants to freely invent a short story and compose a whole melody to represent it. We observed their process, and we asked to reflect on it and describe it as well as the melody and the story in relation with each other.<b><br></b>