cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.2z34tmps7
title: Whole genome resequencing of pink stem borer (Part 2/4)

description: Understanding the genetic basis of adaptive evolution following habitat
 expansion can have important implications for pest
 management. The pink stem borer (PSB), Sesamia inferens
 (Walker), is a destructive pest of rice that was historically restricted
 to regions south of N34° latitude in China. However, with changes in
 global climate and farming practices, the distribution of this moth has
 progressively exceeded its traditional limit of 34° N and encompassed most
 regions in North China. However, the evolutionary processes and local
 adaptative changes of this species, are not yet fully
 understood. Here, we employed genome resequencing to genotype
 over 1 million of high‐quality SNPs and 20,000 SVs from 14 geographical
 populations across China. Three highly differentiated genetic groups were
 formed, corresponding to Northern and Southern China regions and the
 Yunnan-Guizhou Plateau. The pairwise genetic distance between locations
 was highly correlated with geographic and environmental distance. Our
 estimates of evolutionary history indicate asymmetric migration with
 varying population sizes across three genetic groups. Selective sweep
 analyses highlight the strongly selected insect cuticle GRP genes enhanced
 desiccation adaptability of the northern group and SETMAR gene associated
 with range expansion and local adaptation in the Shandong population.
 Based on an integrated analysis of transcriptome and enGWAS, we also
 identified the CYP321A7 gene as being involved in the PSB
 adaption to desiccation climates. Our findings revealed the
 phylogeography, demographic dynamics and evolutionary forces of PSB and
 identified potential candidate genes to explore the genetic adaptation to
 novel environments, which have significant implications for the
 development of effective strategies to control this pest.
DOI: 10.5061/dryad.8w9ghx3sq
title: Whole genome resequencing of pink stem borer (Part 3/4)

description: Understanding the genetic basis of adaptive evolution following habitat
 expansion can have important implications for pest
 management. The pink stem borer (PSB), Sesamia inferens
 (Walker), is a destructive pest of rice that was historically restricted
 to regions south of N34° latitude in China. However, with changes in
 global climate and farming practices, the distribution of this moth has
 progressively exceeded its traditional limit of 34° N and encompassed most
 regions in North China. However, the evolutionary processes and local
 adaptative changes of this species, are not yet fully
 understood. Here, we employed genome resequencing to genotype
 over 1 million of high‐quality SNPs and 20,000 SVs from 14 geographical
 populations across China. Three highly differentiated genetic groups were
 formed, corresponding to Northern and Southern China regions and the
 Yunnan-Guizhou Plateau. The pairwise genetic distance between locations
 was highly correlated with geographic and environmental distance. Our
 estimates of evolutionary history indicate asymmetric migration with
 varying population sizes across three genetic groups. Selective sweep
 analyses highlight the strongly selected insect cuticle GRP genes enhanced
 desiccation adaptability of the northern group and SETMAR gene associated
 with range expansion and local adaptation in the Shandong population.
 Based on an integrated analysis of transcriptome and enGWAS, we also
 identified the CYP321A7 gene as being involved in the PSB
 adaption to desiccation climates. Our findings revealed the
 phylogeography, demographic dynamics and evolutionary forces of PSB and
 identified potential candidate genes to explore the genetic adaptation to
 novel environments, which have significant implications for the
 development of effective strategies to control this pest.
DOI: 10.5061/dryad.1c59zw422
title: Whole genome resequencing of pink stem borer (Part 4/4)

description: Understanding the genetic basis of adaptive evolution following habitat
 expansion can have important implications for pest
 management. The pink stem borer (PSB), Sesamia inferens
 (Walker), is a destructive pest of rice that was historically restricted
 to regions south of N34° latitude in China. However, with changes in
 global climate and farming practices, the distribution of this moth has
 progressively exceeded its traditional limit of 34° N and encompassed most
 regions in North China. However, the evolutionary processes and local
 adaptative changes of this species, are not yet fully
 understood. Here, we employed genome resequencing to genotype
 over 1 million of high‐quality SNPs and 20,000 SVs from 14 geographical
 populations across China. Three highly differentiated genetic groups were
 formed, corresponding to Northern and Southern China regions and the
 Yunnan-Guizhou Plateau. The pairwise genetic distance between locations
 was highly correlated with geographic and environmental distance. Our
 estimates of evolutionary history indicate asymmetric migration with
 varying population sizes across three genetic groups. Selective sweep
 analyses highlight the strongly selected insect cuticle GRP genes enhanced
 desiccation adaptability of the northern group and SETMAR gene associated
 with range expansion and local adaptation in the Shandong population.
 Based on an integrated analysis of transcriptome and enGWAS, we also
 identified the CYP321A7 gene as being involved in the PSB
 adaption to desiccation climates. Our findings revealed the
 phylogeography, demographic dynamics and evolutionary forces of PSB and
 identified potential candidate genes to explore the genetic adaptation to
 novel environments, which have significant implications for the
 development of effective strategies to control this pest.
DOI: 10.5061/dryad.d7wm37q6j
title: Morphology, anatomy and photosynthesis data for two leaf types of Ficus pumila

description: Plants that display heteroblasty possess conspicuous variations in leaf
 morphology between their juvenile and adult phases, with certain species
 retaining juvenile-like leaves even in adulthood. Nevertheless, the
 ecological advantages of maintaining two or more distinct leaf types in
 heteroblastic plants at the adult stage remain unclear. The aim of this
 study is to examine the adaptive significance of heteroblastic leaves
 sampled from branches with divergent functions (sterile and fertile
 branches) of mature Ficus pumila individuals by comparing their
 morphological, anatomical, and physiological characteristics. Leaves on
 sterile branches (LSs) exhibited a significantly larger specific leaf
 area, thinner palisade and spongy tissues, lower chlorophyll contents, and
 lower light saturation points than leaves on fertile branches (LFs). These
 results demonstrate that LSs are better adapted to low light environments,
 while LFs are well equipped to take advantages of high light conditions.
 However, both LFs and LSs have a low light compensation point with no
 significant difference between them, indicating that they start to
 accumulate photosynthetic products under same light conditions.
 Interestingly, significant higher net photosynthetic rate was detected in
 LFs, showing they have higher photosynthetic capacity. Furthermore, LFs
 produced significant more nutrients compared to LSs, which may associate
 to their ability of accumulating more photosynthetic products under full
 light conditions and higher photosynthetic capacity. Overall, we observed
 a pattern of divergence in morphological features of leaves on two
 functional branches. Anatomical and physiological features indicate that
 LFs have an advantage in varied light conditions, providing amounts of
 photosynthetic products to support the sexual reproduction, while LSs
 adapt to low light environments. Our findings provide evidence that
 heteroblasty facilitates F. pumila to utilize varying light environments,
 likely associated with its growth form as a climbing plant. This strategy
 allows the plant to allocate resources more effectively and optimize its
 overall fitness.
description: # Morphology, anatomy and photosynthesis data for two leaf types of Ficus
 pumila
 [https://doi.org/10.5061/dryad.d7wm37q6j](https://doi.org/10.5061/dryad.d7wm37q6j) We provide here the morphological, anatomical and physiologic datasets to reproduce results of the paper **Functional trait divergence associated with heteromorphic leaves in a climbing fig**. ## Description of the data and file structure 1\. Dataset 1 consists of four sheets\, which contain data on leaf morphology\, anatomy\, physiology\, as well as chlorophyll contents and nutrients\. 2\. Dataset 2 comprises two files containing photosynthetic measurements of leaves on sterile \(LSs\) and fertile branches \(LSs\) from various individuals\. Each measurement is saved as a CSV file with the same name as the tree code in Dataset 1\.
DOI: 10.5061/dryad.zs7h44jfx
title: Data from: leaf functional diversity and environmental filtering in a tropical dry forest: comparison between two geological substrates

description: The role of geological substrate in shaping plant community functional
 diversity remains poorly understood. Considering the involvement of leaves
 in the energy, water and nutrient economics of plants, we hypothesized
 that leaves experience geology-related filtering, impacting functional
 attributes and functional leaf community diversity on different
 substrates. We studied tropical dry forest communities on limestone and
 siliciclastic phyllite-derived soils, comparing their functional diversity
 and soil physico-chemical properties. We predicted the most benign habitat
 (less severe filter) to be associated with higher leaf functional
 diversity and an acquisitive strategy prevalence, while the more stressful
 habitat should show conservative leaf traits and lower leaf functional
 diversity. We measured six traits in 31 common tree species (representing
 ~80% of community crown cover): leaf area, specific leaf area, leaf
 thickness, leaf dry matter content, petiole length, and leaf blade
 narrowness. Leaf functional diversity was assessed through the functional
 trait dispersion metric. Intraspecific functional variation was examined
 in 25 species shared between substrates. The limestone substrate was more
 fertile (higher phosphorous) with higher water retention, while phyllite
 had higher nitrogen and lower humidity. Principal component analysis
 segregated plots by substrate, with limestone plots being more clustered.
 Community leaf functional diversity was higher in the limestone forest.
 Most species examined showed inter-substrate trait differences in at least
 one leaf functional trait. The two substrates constituted distinct growth
 environments, with the more benign substrate associated to higher
 community functional leaf diversity. The intraspecific analysis revealed
 the prevalence of acquisitive traits in the more benign and more
 conservative traits in the more stressful habitat. This study advances our
 understanding of the role of geological substrate as an environmental
 filter in tropical dry forest, influencing leaf functional responses and
 emphasizing the importance of intraspecific functional variation.
description: Please see article in Ecology and Evolution for a detailed
 description of field and analytical methods.
DOI: 10.15468/dl.q72ta6
title: Occurrence Download

description: A dataset containing 94947 species occurrences available in GBIF matching the query:
{
 "and" : [
 "IucnRedListCategory is one of (EX, EW)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 94947 records from 1329 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003525-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7kq7ye
title: Occurrence Download

description: A dataset containing 275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "TaxonKey is Galictis vittata (Schreber, 1776)"
 ]
}

 The dataset includes 275 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016500-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29218595
title: PLSC: Criteria air pollutants and cortical thickness, cortical surface area, subcortical volume

description: Association between fine particulate matter (PM₂.₅), nitrogen dioxide (NO₂), ozone (O₃), with three major neuroanatomical metrics derived from structural MRI: cortical thickness, cortical surface area, and subcortical volume.Statistical method used is Partial least square correlation (PLSC), a multivariate technique that identifies latent variables (LVs) maximizing covariance between two sets of variables—in this case, pollutant concentrations and brain measures .
DOI: 10.6084/m9.figshare.29218595.v1
title: PLSC: Criteria air pollutants and cortical thickness, cortical surface area, subcortical volume

description: Association between fine particulate matter (PM₂.₅), nitrogen dioxide (NO₂), ozone (O₃), with three major neuroanatomical metrics derived from structural MRI: cortical thickness, cortical surface area, and subcortical volume.Statistical method used is Partial least square correlation (PLSC), a multivariate technique that identifies latent variables (LVs) maximizing covariance between two sets of variables—in this case, pollutant concentrations and brain measures .
DOI: 10.6084/m9.figshare.31145776
title: external validation data fMRI object

description: fMRI object (Canlab Matlab-based interface) More info at https://canlab.github.io/
DOI: 10.6084/m9.figshare.31145776.v1
title: external validation data fMRI object

description: fMRI object (Canlab Matlab-based interface) More info at https://canlab.github.io/
DOI: 10.15468/dl.yb79v7
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio funckii",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010676-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27997739
title: Zircon U-Pb ages of "Limited Sediment Response to Millennial-Scale River Capture in Arid and Semi-Arid Regions"

description: There are detrital zircon U-Pb ages from terraces (WDHT1 and WDHT2) and riverbed (WDHRB-U and WDHRB-L) in Yuhebu section of Wuding River, Chinese Loess Plateau.
DOI: 10.6084/m9.figshare.27997739.v2
title: Zircon U-Pb ages of "Limited Sediment Response to Millennial-Scale River Capture in Arid and Semi-Arid Regions"

description: There are detrital zircon U-Pb ages from terraces (WDHT1 and WDHT2) and riverbed (WDHRB-U and WDHRB-L) in Yuhebu section of Wuding River, Chinese Loess Plateau.
DOI: 10.6084/m9.figshare.27997739.v1
title: Zircon U-Pb ages of "Limited Sediment Response to Millennial-Scale River Capture in Arid and Semi-Arid Regions"

description: There are detrital zircon U-Pb ages from terraces (WDHT1 and WDHT2) and riverbed (WDHRB-U and WDHRB-L) in Yuhebu section of Wuding River, Chinese Loess Plateau.
DOI: 10.15468/dl.fgfgum
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio nutans",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 100 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010677-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18366457
title: Lesson Plan Baillargeon Unified Field

description: Zenodo Custom License & Rights Statement

Title of Intellectual Property: The Baillargeon Unified Field (BUF) / The Step-Matrix Architecture

Author/Originator: Adrian Alan Baillargeon

Legal Status: Proprietary Intellectual Property – All Rights Reserved.

1. Ownership and Copyright

This document and the mathematical architecture contained herein (including but not limited to the 1.1 Shift, PHI^12 Volumetric Scaling, and the E_Infinity_Z0 Zero Entropy Convergence) are the sole intellectual property of Adrian Alan Baillargeon. This work is protected under international copyright laws and treaty provisions.

2. Restrictions on Use

No part of this work may be reproduced, distributed, or transmitted in any form or by any means, including photocopying, recording, or other electronic or mechanical methods, without the prior written permission of the owner. This includes, but is not limited to:

• Use in academic papers or citations.

• Integration into Large Language Models (LLMs) or AI training datasets.

• Physical application in engineering or experimental physics.

• Modification or "branching" of the Step-Matrix equations.

3. No License Granted

Publication of this metadata on Zenodo does not constitute a license to use, share, or adapt the material. Any unauthorized use of the BEDROCK, DERIVED, or NOVEL constants as defined in this architecture for commercial or non-commercial purposes is strictly prohibited and subject to legal action.

4. Access Requests

Access to the underlying data files is set to RESTRICTED. Permission to view or utilize this data must be obtained through a formal written request to the author. The author reserves the right to deny access at their sole discretion.

5. Governing Law

Any disputes arising from the unauthorized use of this intellectual property shall be governed by the laws of the jurisdiction of the author's choosing.
DOI: 10.5281/zenodo.18366456
title: Lesson Plan Baillargeon Unified Field

description: Zenodo Custom License & Rights Statement

Title of Intellectual Property: The Baillargeon Unified Field (BUF) / The Step-Matrix Architecture

Author/Originator: Adrian Alan Baillargeon

Legal Status: Proprietary Intellectual Property – All Rights Reserved.

1. Ownership and Copyright

This document and the mathematical architecture contained herein (including but not limited to the 1.1 Shift, PHI^12 Volumetric Scaling, and the E_Infinity_Z0 Zero Entropy Convergence) are the sole intellectual property of Adrian Alan Baillargeon. This work is protected under international copyright laws and treaty provisions.

2. Restrictions on Use

No part of this work may be reproduced, distributed, or transmitted in any form or by any means, including photocopying, recording, or other electronic or mechanical methods, without the prior written permission of the owner. This includes, but is not limited to:

• Use in academic papers or citations.

• Integration into Large Language Models (LLMs) or AI training datasets.

• Physical application in engineering or experimental physics.

• Modification or "branching" of the Step-Matrix equations.

3. No License Granted

Publication of this metadata on Zenodo does not constitute a license to use, share, or adapt the material. Any unauthorized use of the BEDROCK, DERIVED, or NOVEL constants as defined in this architecture for commercial or non-commercial purposes is strictly prohibited and subject to legal action.

4. Access Requests

Access to the underlying data files is set to RESTRICTED. Permission to view or utilize this data must be obtained through a formal written request to the author. The author reserves the right to deny access at their sole discretion.

5. Governing Law

Any disputes arising from the unauthorized use of this intellectual property shall be governed by the laws of the jurisdiction of the author's choosing.
DOI: 10.15468/dl.4w26dv
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Nicotiana rustica",
 "Year 1950-2020"
 ]
}

 The dataset includes 81 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010678-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31145752
title: Discovery data fmri object

description: fMRI object (Canlab Matlab-based interface) More info at https://canlab.github.io/
DOI: 10.6084/m9.figshare.31145752.v1
title: Discovery data fmri object

description: fMRI object (Canlab Matlab-based interface) More info at https://canlab.github.io/
DOI: 10.15468/dl.s7h8n5
title: Occurrence Download

description: A dataset containing 273 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio tephrosioides",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 273 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010679-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31145719
title: painfree data fmri object

description: fMRI object (Canlab Matlab-based interface) More info at https://canlab.github.io/
DOI: 10.6084/m9.figshare.31145719.v1
title: painfree data fmri object

description: fMRI object (Canlab Matlab-based interface) More info at https://canlab.github.io/
DOI: 10.15468/dl.6wtjah
title: Occurrence Download

description: A dataset containing 152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sericocarpus oregonensis",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 152 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010680-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6w49qh
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Seriphium cinereum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 123 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010681-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30625913
title: <b>上颞极介导</b>

description: <b>背景：</b>早期阿尔茨海默病（AD）病理主要表现在默认模式网络（DMN）中。阿尔茨海默病的最佳遗传风险因子载<i>脂蛋白（APO）E4</i>，对三个DMN亚系统（中线核心、内侧颞叶[MTL]和背侧前额叶[DMPFC]系统）的结构完整性有一定影响，导致认知障碍。其潜在介导机制和亚系统特异性效应仍不清楚。<b>方法：</b>本研究使用阿尔茨海默病神经影像倡议（ADNI）的数据，招募了176名按倾向评分匹配的参与者（轻度认知障碍[MCI]组116人，<i>APO E4+</i>/<i>58 APO E4-</i>;认知正常[CN]组60人，<i>APO E4+</i>30 <i>APO E4-</i>）.选定了八个DMN子系统的关注区域（ROI），并从结构MRI数据中获得了其归一化体积。采用的统计分析包括百分新星、多元线性回归和自助中介效应分析。<b>结果：</b>在<i>APO E4</i>中，发现其在DMPFC亚系统区域如直直回（REC）和上颞极（TPOsup）体积显著减少。中介分析显示，TPOsup体积强烈介导<i>APO E4</i>状态-MMSE分数关系，占总效应的30.43%。<b>结论：</b>本研究确定背侧前额叶亚系统为<i>APO E4</i>相关神经毒性靶点，并证明TPOsup作为介导节点，对连接<i>APO E4</i>与认知障碍至关重要。这些发现表明TPOsup作为早期阿尔茨海默病的潜在神经影像生物标志物，并建议在轻度认知障碍中进行风险分层干预。