cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11879784
title: WHO_2016_DATASET.xlsx

description: Dataset used in TRR paper: Analyzing the Relationship Between Road Safety Pillars and the WHO Member States Mortality Rate Using Structural Equation Modeling Approach
DOI: 10.6084/m9.figshare.11879760
title: NS-BNF and crop residue

description: Raw data of a paper entitled "Agriculture by non-symbiotic biological nitrogen fixation requires not much crop residue application".
DOI: 10.6084/m9.figshare.11879784.v1
title: WHO_2016_DATASET.xlsx

description: Dataser used in TRR paper: Analyzing the Relationship Between Road Safety Pillars and the WHO Member States Mortality Rate Using Structural Equation Modeling Approach
DOI: 10.6084/m9.figshare.11879727
title: Supporting Information.docx

description: Analytical results for whole rock and reference data <br>
DOI: 10.6084/m9.figshare.11879727.v1
title: Supporting Information.docx

description: Analytical results for whole rock and reference data <br>
DOI: 10.6084/m9.figshare.11879715
title: Source Data

description: Source data for Figures in the main text and Supplementary Information of the manuscript "Electricity-Powered Artificial Root Nodule".
DOI: 10.6084/m9.figshare.11879724
title: Domain Spacing SQL Database File

description: This file contains 5 tables, a Profile table containing the pHMM data, a Domain Neighbor lookup table, a contig lookup table, a Domain of Interest lookup table, and the large domain spacing file that uses the other ids
DOI: 10.6084/m9.figshare.11879724.v1
title: Domain Spacing SQL Database File

description: This file contains 5 tables, a Profile table containing the pHMM data, a Domain Neighbor lookup table, a contig lookup table, a Domain of Interest lookup table, and the large domain spacing file that uses the other ids
DOI: 10.6084/m9.figshare.11879715.v1
title: Source Data

description: Source data for Figures in the main text and Supplementary Information of the manuscript "Electricity-Powered Artificial Root Nodule".
DOI: 10.6084/m9.figshare.11879715.v2
title: Source Data

description: Source data for Figures in the main text and Supplementary Information of the manuscript "Electricity-Powered Artificial Root Nodule".
DOI: 10.6084/m9.figshare.11879643
title: Commuters-weather.csv

description: Plot data in csv format.Cycling level regarding weather conditions, in March 2018 at Puerto Madryn.Commuters in urban or recreative cycling rides across weather conditions<br>
DOI: 10.6084/m9.figshare.11879637
title: Column Lookup Table

description: This table contains information regarding the columns found in the accompanying data citations.
DOI: 10.6084/m9.figshare.11879643.v1
title: Commuters-weather.csv

description: Plot data in csv format.Cycling level regarding weather conditions, in March 2018 at Puerto Madryn.Commuters in urban or recreative cycling rides across weather conditions<br>
DOI: 10.21954/ou.rd.11879583
title: Aram Dorsum Crater Count summary data

description: Summary of Aram Dorsum crater count data and size frequency distribution plots.
DOI: 10.21954/ou.rd.11879583.v1
title: Aram Dorsum Crater Count summary data

description: Summary of Aram Dorsum crater count data and size frequency distribution plots.
DOI: 10.6084/m9.figshare.11879493
title: Mechanical stage and mounting bed for murine ophthalmic imaging

description: This is a CAD file for a 3D printable mouse bed, lid, and a SolidWorks file for a 5-axis degree-of-freedom rotation/translation stage used for ophthalmic imaging. The bed has a water channel printed into the base which can be connected to a heated water recycler to maintain animal body temperature while anesthetized. All custom and commercially available parts are included in the SolidWorks file.<br>
DOI: 10.6084/m9.figshare.11879457
title: NAC_CKD datasets

description: Data related to publication in PlosONE
DOI: 10.6084/m9.figshare.11879385
title: Profile HMMs

description: This file contains all profile hidden markov models used in this work. This includes domains from PFAM, vFAM and pVOG.
DOI: 10.6084/m9.figshare.11879385.v1
title: Profile HMMs

description: This file contains all profile hidden markov models used in this work. This includes domains from PFAM, vFAM and pVOG.
DOI: 10.6084/m9.figshare.11879385.v2
title: Profile HMMs

description: This file contains all profile hidden markov models used in this work. This includes domains from PFAM, vFAM and pVOG.
DOI: 10.6084/m9.figshare.11879334
title: Neuronal deformation data and cellular morphology data from 'High-speed interferometric imaging reveals dynamics of neuronal deformation during the action potential'

description: This dataset contains the experimental data presented in the paper 'High-speed interferometric imaging reveals dynamics of neuronal deformation during the action potential'.<br>Neuronal deformations during the action potential on six different cells and the corresponding cellular morphology data are provided in this dataset. The neuronal deformations were recorded by quantitative phase microscopy (QPM) with spike-triggered averaging synchronized to optogenetic stimulation. The QPM data represents the optical path length changes through the neurons at 10 kHz sampling rate, with filtering and corrections applied as described in the publication. The cellular morphology of each cell in the QPM dataset was captured via confocal microscopy using the same fluorophore used for the optogenetic control. The confocal image stacks represent a close approximation to the underlying cellular morphology of the cells whose deformations were recorded at the much higher axial and temporal resolution in QPM.<br>The deformations associated with the action potential and morphology data together should provide a useful framework for those studying the electro-mechanical coupling in neurons and other electrically active cells. Electrical and structural models of the membrane deformations can be simulated on the morphological data and compared to the measured deformations.<br>Please refer to the paper for more details on the imaging method and results.<br>
DOI: 10.6084/m9.figshare.11879340
title: Escherichia coli pathogenicity GWAS: input genome sequences (updated)

description: Input genomes for a GWAS study on Escherichia coli intrinsic pathogenicity
DOI: 10.6084/m9.figshare.11879301
title: Trimmed Domain Compile File

description: All HMMER3 identified domains following processing to remove overlapping and poor quality domains.
DOI: 10.6084/m9.figshare.11879274
title: Forner-Phillips, Mills, Ross (2020) Source Memory Task Behavior Data

description: This data set contains behavioral data from "Tendency to Ruminate and Anxiety are Associated with Altered Alpha and Beta Oscillatory Power Dynamics During Memory for Contextual Details". Proportion of responses, reaction time, RRS-R score, BDI-II score, and BAI score are included for each participant. Proportion of responses and reaction type are separated by trial type. OHH is when the participant correctly identified an item and its contextual detail. OHM is when the participant correctly identified the item, but missed the detail. Miss is when the participant indicated that an item was new, but it was previously studied. CR is correct rejection and indicates that a participant correctly identified the test item as unstudied. FA is false alarm and indicates the participant indicated an unstudied item was previously studied. RRS-R is the total score on the ruminative responses scale-revised. BDI-II is the total score on the Beck Depression Inventory-II. BAI is the total score on the Beck Anxiety Inventory.
DOI: 10.6084/m9.figshare.11879274.v1
title: Forner-Phillips, Mills, Ross (2020) Source Memory Task Behavior Data

description: This data set contains behavioral data from "Tendency to Ruminate and Anxiety are Associated with Altered Alpha and Beta Oscillatory Power Dynamics During Memory for Contextual Details". Proportion of responses, reaction time, RRS-R score, BDI-II score, and BAI score are included for each participant. Proportion of responses and reaction type are separated by trial type. OHH is when the participant correctly identified an item and its contextual detail. OHM is when the participant correctly identified the item, but missed the detail. Miss is when the participant indicated that an item was new, but it was previously studied. CR is correct rejection and indicates that a participant correctly identified the test item as unstudied. FA is false alarm and indicates the participant indicated an unstudied item was previously studied. RRS-R is the total score on the ruminative responses scale-revised. BDI-II is the total score on the Beck Depression Inventory-II. BAI is the total score on the Beck Anxiety Inventory.
DOI: 10.6084/m9.figshare.11879226
title: 12. DataInBrief: ARTS annotation of contig data

description: ARTS (https://arts3.ziemertlab.com/) version 2.0 annotation of contigs using actinobacteria and alphaproteobacteria reference sets. Phylogeny is not applicable because this is a metagenomic dataset.<br>
DOI: 10.6084/m9.figshare.11879253
title: Domain Spacing File

description: This is the domain spacing data set allowing for the use of any domain identified to be explored as the center domain.
DOI: 10.6084/m9.figshare.11879301.v1
title: Trimmed File

description: All HMMER3 identified domains following processing to remove overlapping and poor quality domains.
DOI: 10.6084/m9.figshare.11879253.v1
title: Domain Spacing File

description: This is the domain spacing data set allowing for the use of any domain identified to be explored as the center domain.
DOI: 10.6084/m9.figshare.11879226.v1
title: ARTS annotation of contig data

description: ARTS (https://arts3.ziemertlab.com/) annotation of contigs using actinobacteria and alphaproteobacteria reference sets. Phylogeny is not applicable.<br>
DOI: 10.6084/m9.figshare.11879301.v2
title: Trimmed File

description: All HMMER3 identified domains following processing to remove overlapping and poor quality domains.
DOI: 10.6084/m9.figshare.11879226.v2
title: DataInBrief: ARTS annotation of contig data

description: ARTS (https://arts3.ziemertlab.com/) version 2.0 annotation of contigs using actinobacteria and alphaproteobacteria reference sets. Phylogeny is not applicable because this is a metagenomic dataset.<br>
DOI: 10.6084/m9.figshare.11879301.v4
title: Trimmed Domain Compile File

description: All HMMER3 identified domains following processing to remove overlapping and poor quality domains.
DOI: 10.6084/m9.figshare.11879301.v3
title: Trimmed File

description: All HMMER3 identified domains following processing to remove overlapping and poor quality domains.
DOI: 10.6084/m9.figshare.11879226.v3
title: 12. DataInBrief: ARTS annotation of contig data

description: ARTS (https://arts3.ziemertlab.com/) version 2.0 annotation of contigs using actinobacteria and alphaproteobacteria reference sets. Phylogeny is not applicable because this is a metagenomic dataset.<br>
DOI: 10.6084/m9.figshare.11879202
title: Accession Numbers

description: This table contains all of the accession numbers for the viral genomes contained within this data set.
DOI: 10.6084/m9.figshare.11879226.v5
title: 12. DataInBrief: ARTS annotation of contig data

description: ARTS (https://arts3.ziemertlab.com/) version 2.0 annotation of contigs using actinobacteria and alphaproteobacteria reference sets. Phylogeny is not applicable because this is a metagenomic dataset.<br>
DOI: 10.6084/m9.figshare.11879205.v1
title: data

description: These files contain the data used in the proof of Lemma 3.1 and Proposition 4.1 in the paper "Golden mean renormalization<br>for the almost Mathieu operator and related skew products"<br><br>
DOI: 10.6084/m9.figshare.11879226.v4
title: 13. DataInBrief: ARTS annotation of contig data

description: ARTS (https://arts3.ziemertlab.com/) version 2.0 annotation of contigs using actinobacteria and alphaproteobacteria reference sets. Phylogeny is not applicable because this is a metagenomic dataset.<br>
DOI: 10.6084/m9.figshare.11879163
title: Ophthalmic Imaging Relay for Small Animals

description: Zemax file for an ophthalmic imaging relay for small animals. This design is optimized for combined optical coherence tomography and scanning laser ophthalmoscopy. This system uses a single mode fiber input and a collimator (not simulated) which results in a 4 mm input beam.
DOI: 10.6084/m9.figshare.11879202.v1
title: Untitled Item

description: This table contains all of the accession numbers for the viral genomes contained within this data set.
DOI: 10.6084/m9.figshare.11878206
title: 5. DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (signficantly diff pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11879094
title: 7. Significant KEGG ortholog annotated genes

description: Statistically significant KEGG ortholog annotated genes that meet the following criteria: p-interaction ≤ 0.05 followed by q-winter/summer RNA ≤ 0.05.
DOI: 10.6084/m9.figshare.11878203
title: 11. DataInBrief: data used to generate differentially expressed metal resistance genes

description: Expression data for BacMet annotated metal resistance genes used to generate hierarchical clustering and heat map of differentially expressed select (288) genes.
DOI: 10.6084/m9.figshare.11878206.v1
title: Data used to generate Figures 5 and S12–S13

description: Differential KEGG Ortholog (KO) data used to generate Figures 5, S12–S13.<br>
DOI: 10.6084/m9.figshare.11879094.v1
title: Significant KEGG ortholog annotated genes

description: Statistically significant KEGG ortholog annotated genes that meet the following criteria: p-interaction ≤ 0.05 followed by q-winter/summer RNA ≤ 0.05.
DOI: 10.6084/m9.figshare.11878203.v1
title: Data used to generate Figure S14

description: Expression data for BacMet annotated metal resistance genes used to generate Figure S14.<br>
DOI: 10.6084/m9.figshare.11878206.v2
title: Data used to generate Figures 4 and S12–S13

description: Differential KEGG Ortholog (KO) data used to generate Figures 4, S12–S13.<br>
DOI: 10.6084/m9.figshare.11879094.v2
title: Significant KEGG ortholog annotated genes for Tables S21-S32

description: Statistically significant KEGG ortholog annotated genes that meet the following criteria: p-interaction ≤ 0.05 followed by q-winter/summer RNA ≤ 0.05.
DOI: 10.6084/m9.figshare.11878206.v3
title: DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data used to generate KEGG pathways of interest that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11878203.v2
title: DataInBrief: data used to generate differentially expressed metal resistance genes

description: Expression data for BacMet annotated metal resistance genes used to generate hierarchical clustering and heat map of differentially expressed select (288) genes.
DOI: 10.6084/m9.figshare.11879094.v3
title: Significant KEGG ortholog annotated genes for Tables S21-S32

description: Statistically significant KEGG ortholog annotated genes that meet the following criteria: p-interaction ≤ 0.05 followed by q-winter/summer RNA ≤ 0.05.
DOI: 10.6084/m9.figshare.11878206.v4
title: DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11878203.v3
title: 11. DataInBrief: data used to generate differentially expressed metal resistance genes

description: Expression data for BacMet annotated metal resistance genes used to generate hierarchical clustering and heat map of differentially expressed select (288) genes.
DOI: 10.6084/m9.figshare.11878206.v5
title: 5 DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11879094.v4
title: Significant KEGG ortholog annotated genes for Tables S21-S32

description: Statistically significant KEGG ortholog annotated genes that meet the following criteria: p-interaction ≤ 0.05 followed by q-winter/summer RNA ≤ 0.05.
DOI: 10.6084/m9.figshare.11878203.v5
title: 11. DataInBrief: data used to generate differentially expressed metal resistance genes

description: Expression data for BacMet annotated metal resistance genes used to generate hierarchical clustering and heat map of differentially expressed select (288) genes.
DOI: 10.6084/m9.figshare.11878206.v6
title: 5. DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11879094.v5
title: 8. Significant KEGG ortholog annotated genes

description: Statistically significant KEGG ortholog annotated genes that meet the following criteria: p-interaction ≤ 0.05 followed by q-winter/summer RNA ≤ 0.05.
DOI: 10.6084/m9.figshare.11878203.v4
title: 12. DataInBrief: data used to generate differentially expressed metal resistance genes

description: Expression data for BacMet annotated metal resistance genes used to generate hierarchical clustering and heat map of differentially expressed select (288) genes.
DOI: 10.6084/m9.figshare.11879094.v7
title: 7. Significant KEGG ortholog annotated genes

description: Statistically significant KEGG ortholog annotated genes that meet the following criteria: p-interaction ≤ 0.05 followed by q-winter/summer RNA ≤ 0.05.
DOI: 10.6084/m9.figshare.11878200
title: 6. DataInBrief: data representing differentially expressed KEGG pathways

description: Differential expression Prokka-annotated data of ORFs that were mapped to KEGG pathways.<br>
DOI: 10.6084/m9.figshare.11879094.v6
title: 9. Significant KEGG ortholog annotated genes

description: Statistically significant KEGG ortholog annotated genes that meet the following criteria: p-interaction ≤ 0.05 followed by q-winter/summer RNA ≤ 0.05.
DOI: 10.6084/m9.figshare.11878197
title: PLoS One: Data used to generate Table 3

description: Differential expression data used to determine overexpressed ORFS between winter and summer.<br>
DOI: 10.6084/m9.figshare.11878206.v7
title: 6. DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11878206.v8
title: 5. DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11878206.v9
title: 6. DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11878197.v1
title: Data used to generate Table 1

description: Differential expression data used to determine overexpressed ORFS between winter and summer.<br>
DOI: 10.6084/m9.figshare.11878200.v1
title: Data used to generate Figure S11

description: Differential expression data of ORFs used to generate Figure S11.<br>
DOI: 10.6084/m9.figshare.11878197.v3
title: PLoS One: Data used to generate Table 3

description: Differential expression data used to determine overexpressed ORFS between winter and summer.<br>
DOI: 10.6084/m9.figshare.11878206.v10
title: 7. DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11878197.v2
title: Data used to generate Table 3

description: Differential expression data used to determine overexpressed ORFS between winter and summer.<br>
DOI: 10.6084/m9.figshare.11878200.v2
title: Data representing differentially expressed KEGG pathways

description: Differential expression Prokka-annotated data of ORFs that were mapped to KEGG pathways.<br>
DOI: 10.6084/m9.figshare.11878206.v11
title: 7. DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (signficantly diff pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11878206.v12
title: 5. DataInBrief: data used to generate KEGG pathways of interest

description: Differential KEGG Ortholog (KO) data (diff_all and diff_rna) used to generate KEGG pathways of interest (signficantly diff pathways_of_interest_190823) that were significantly differentially expressed.
DOI: 10.6084/m9.figshare.11878182
title: DataInBrief: data used to generate Principal Component Analyses (PCA) Plots

description: Data used to generate PCA plots of 1) DNA in water (summer) and sediment based on normalized taxonomic read counts; and 2) DNA and RNA present in summer water and sediment based on normalized counts of all functionally annotated genes from the metagenomic assembly. <br>
DOI: 10.6084/m9.figshare.11878188
title: PLoS One: Data used to generate Figure 3

description: Taxonomic data used to generate Figure 3.<br>
DOI: 10.6084/m9.figshare.11878200.v3
title: DataInBrief: data representing differentially expressed KEGG pathways

description: Differential expression Prokka-annotated data of ORFs that were mapped to KEGG pathways.<br>
DOI: 10.6084/m9.figshare.11878182.v1
title: Data used to generate Figures S9 and S10

description: Data used to generate PCA plots in the supporting information (i.e., Fig. S9–S10)<br>
DOI: 10.6084/m9.figshare.11878188.v1
title: Data used to generate Figure 4

description: Taxonomic data used to generate Figure 4.<br>
DOI: 10.6084/m9.figshare.11878200.v4
title: 9. DataInBrief: data representing differentially expressed KEGG pathways

description: Differential expression Prokka-annotated data of ORFs that were mapped to KEGG pathways.<br>
DOI: 10.6084/m9.figshare.11878188.v3
title: PLoS One: Data used to generate Figure 3

description: Taxonomic data used to generate Figure 3.<br>
DOI: 10.6084/m9.figshare.11878200.v6
title: 6. DataInBrief: data representing differentially expressed KEGG pathways

description: Differential expression Prokka-annotated data of ORFs that were mapped to KEGG pathways.<br>
DOI: 10.6084/m9.figshare.11878182.v2
title: Data used to generate Principal Component Analyses (PCA) Plots

description: Data used to generate PCA plots of 1) DNA in water (summer) and sediment based on normalized taxonomic read counts; and 2) DNA and RNA present in summer water and sediment based on normalized counts of all functionally annotated genes from the metagenomic assembly. <br>
DOI: 10.6084/m9.figshare.11878188.v2
title: Data used to generate Figure 3

description: Taxonomic data used to generate Figure 3.<br>
DOI: 10.6084/m9.figshare.11878200.v5
title: 8. DataInBrief: data representing differentially expressed KEGG pathways

description: Differential expression Prokka-annotated data of ORFs that were mapped to KEGG pathways.<br>
DOI: 10.6084/m9.figshare.11878173
title: PLoS One: Raw ICPMS data for Ely Brook water and sediment

description: ICPMS data.<br>