cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1513832
title: Diurnal variability in sea surface temperature characterised from drifting buoy day

description: Drifting-buoy sea surface temperature (SST) records have been used to characterise the diurnal variability of ocean temperature at a depth of order 20 cm. We use measurements covering the period 1990-2009 from the International Comprehensive Ocean-Atmosphere Data Set (ICOADS) version 2.5, which is a collection of marine surface observations that includes individual SST records from drifting buoys. Appropriately transformed, this dataset is well suited for estimation of the diurnal cycle, since many drifting buoys have high temporal coverage (many reports per day), and are globally distributed. For each drifter for each day, we compute the local-time daily SST variation relative to the local-time daily mean SST. Climatological estimates of sub-daily SST variability are found by averaging across various strata of the data: in 10-degree latitudinal bands as well as globally; and stratified with respect to season, wind speed and total cloud cover. A parameterisation of the diurnal variability is fitted as a function of the variables used to stratify the data, and the coefficients for this fit are also provided with the data. Results are consistent with expectations based on previous work: the diurnal temperature cycle peaks in early afternoon (circa 2 pm local time); there is an increase in amplitude and a decrease in seasonality towards the equator. Generally, the ocean at this depth cools on windy days and warms on calm days, so that a component of sub-daily variability is the SST tendency on slower timescales. By not “closing” the diurnal cycle when stratified by environmental conditions, this dataset differs from previously published diurnal-cycle parameterisations. This thorough characterisation of the SST diurnal cycle will assist in interpreting SST observations made at different local times of day for climatological purposes, and in testing and constraining models of the diurnal-cycle and air-sea interaction at high temporal resolution.
DOI: 10.6084/m9.figshare.1513840.v1
title: Shepherd's Pi

description: Shepherd's Pi correlation - the method presented in our article "Better ways to improve standards in brain-behavior correlation analysis" in Front Hum Neurosci.
DOI: 10.6084/m9.figshare.1513829
title: Predicting Response to Neoadjuvant Chemotherapy with PET Imaging using Convolutional Neural Networks

description: Excel file containing ROI features for all 107 patients as described in the article.
DOI: 10.6084/m9.figshare.1513788
title: Electronic structures of cyclometalated palladium complexes in the higher oxidation states

description: XAS data as txt file
DOI: 10.6084/m9.figshare.1513785
title: The effect of Andropogon gerardii ecotype on species composition and functional trait variation in a prairie community.

description: Functional traits for six native tallgrass prairie species were analyzed to determine if there was an effect of <em>A. gerardii</em> ecotype on both within- and between-species functional trait variability. We found that within-species functional trait variation was highest among species in plots planted with non-locally adapted ecotypes of <em>A. gerardii</em> and higher among subordinate rather than dominant species across ecotype plots.
DOI: 10.6084/m9.figshare.1513781
title: DFT study of the oxidation reaction of various primary alcohols in presence of 4-BenzoyloxyTEMPO+ cation and NaCO3- anion

description: Article title: Polymer of Intrinsic Microporosity Host-Guest Substrate Selectivity in Heterogeneous 4-Benzoyloxy-TEMPO Catalysed Alcohol Oxidations DOI: 10.1007/s12678-015-0284-8 Journal: Electrocatalysis Authors: Sunyhik D. Ahn, Adam Kolodziej, Richard Malpass-Evans, Mariolino Carta, Neil B. McKeown, Stephen D. Bull, Antoine Buchard, and Frank Marken* DFT study: - The DFT optimised geometries and computed free enthalpies of various primary alcohols and aldehydes was used to calculate the thermodynamics of the oxidation reaction of various primary alcohols in presence of 4-BenzoyloxyTEMPO+ cation and NaCO3- anion. - The key hydride transfer step was also calculated and is reported for each alcohol studied. Protocol: rB3LYP/6-311+G(d,p)/cpcm=water/T=298.15K Content: - Gaussian09 rev A.02 output files - pdf file containing computational details and tables summarising the thermodynamics and computed activation barriers of the reaction studied.
DOI: 10.6084/m9.figshare.1513785.v2
title: The effect of Andropogon gerardii ecotype on species composition and functional trait variation in a prairie community.

description: Functional traits for six native tallgrass prairie species were analyzed to determine if there was an effect of <em>A. gerardii</em> ecotype on both within- and between-species functional trait variability. We found that within-species functional trait variation was highest among species in plots planted with non-locally adapted ecotypes of <em>A. gerardii</em> and higher among subordinate rather than dominant species across ecotype plots.
DOI: 10.6084/m9.figshare.1513736
title: Vibrational calculations on Sulfur clusters

description: Input and output files for study of vibrational frequencies of sulfur allotropes. All-electron open-shell calculations with FHI-aims within density-functional theory (DFT) with a range of DFT exchange-correlation functionals.
DOI: 10.6084/m9.figshare.1513781.v1
title: DFT study of the oxidation reaction of various primary alcohols in presence of 4-BenzoyloxyTEMPO+ cation and NaCO3- anion

description: Article title: Polymer of Intrinsic Microporosity Host-Guest Substrate Selectivity in Heterogeneous 4-Benzoyloxy-TEMPO Catalysed Alcohol Oxidations DOI: 10.1007/s12678-015-0284-8 Journal: Electrocatalysis Authors: Sunyhik D. Ahn, Adam Kolodziej, Richard Malpass-Evans, Mariolino Carta, Neil B. McKeown, Stephen D. Bull, Antoine Buchard, and Frank Marken* DFT study: - The DFT optimised geometries and computed free enthalpies of various primary alcohols and aldehydes was used to calculate the thermodynamics of the oxidation reaction of various primary alcohols in presence of 4-BenzoyloxyTEMPO+ cation and NaCO3- anion. - The key hydride transfer step was also calculated and is reported for each alcohol studied. Protocol: rB3LYP/6-311+G(d,p)/cpcm=water/T=298.15K Content: - Gaussian09 rev A.02 output files - pdf file containing computational details and tables summarising the thermodynamics and computed activation barriers of the reaction studied.
DOI: 10.6084/m9.figshare.1513734
title: Patient E

description: R workspace format. Variable "series" is the multivariate time series with time, scalp and FOE activity. The first column corresponds to time<br>(in minutes). The following 16 channels correspond to scalp electrodes (2:9 left scalp electrodes and 10:17 right scalp electrodes). The remaining columns correspond to FOE, left and right respectively. The variable "onset" determines the time of seizure onset (in minutes). Sampling frequency=200 Hz. # of channels 28 (8 + 8 scalp and 6 + 6 FOE).
DOI: 10.6084/m9.figshare.1513785.v1
title: The effect of Andropogon gerardii ecotype on species composition and functional trait variation in a prairie community.

description: Functional traits for six native tallgrass prairie species were analyzed to determine if there was an effect of <em>A. gerardii</em> ecotype on both within- and between-species functional trait variability. We found that within-species functional trait variation was highest among species in plots planted with non-locally adapted ecotypes of <em>A. gerardii</em> and higher among subordinate rather than dominant species across ecotype plots.
DOI: 10.6084/m9.figshare.1513732
title: Chami, J. Synthesis Optimisation of the Triazolopyrazine Series

description: Jason Chami, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1513729
title: Manton-Hall, J. Synthesis of ether-linked compounds in the triazolopyrazine series

description: James Manton-Hall, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1513730
title: Kalas, J. C. Improving synthesis of the ether-linked triazolopyrazine compounds

description: James Kalas, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1513732.v1
title: Chami, J. Synthesis Optimisation of the Triazolopyrazine Series

description: Jason Chami, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1513727
title: Orsmond, O. Synthesis of Antimalarial Triazolopyrazine Series Molecules

description: Andreas Orsmond, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1513728
title: Hockings, E. Synthesis of Triazolopyrazines

description: Evan Hockings, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1513729.v1
title: Manton-Hall, J. Synthesis of ether-linked compounds in the triazolopyrazine series

description: James Manton-Hall, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1513730.v1
title: Kalas, J. C. Improving synthesis of the ether-linked triazolopyrazine compounds

description: James Kalas, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1513725
title: Example of use of DoCO #1

description: Describing the structure of an article.
DOI: 10.6084/m9.figshare.1513726
title: Su, A. Synthesis of Antimalarial Compounds from the Triazolopyrazine Ether Series

description: Alexander Su, Open Souce Malaria paper 2015
DOI: 10.6084/m9.figshare.1513734.v1
title: Patient E

description: Initial part of EEG recording of patient E
DOI: 10.6084/m9.figshare.1513725.v1
title: Example of use of DoCO #1

description: Describing the structure of an article.
DOI: 10.6084/m9.figshare.1513726.v1
title: Su, A. Synthesis of Antimalarial Compounds from the Triazolopyrazine Ether Series

description: Alexander Su, Open Souce Malaria paper 2015
DOI: 10.6084/m9.figshare.1513727.v1
title: Orsmond, O. Synthesis of Antimalarial Triazolopyrazine Series Molecules

description: Andreas Orsmond, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1513728.v1
title: Hockings, E. Synthesis of Triazolopyrazines

description: Evan Hockings, Open Source Malaria paper 2015
DOI: 10.6084/m9.figshare.1512835
title: Factors Associated to Prevalence and Incidence of Carbapenem-Resistant Enterobacteriaceae Fecal Carriage

description: clinical dataset
DOI: 10.6084/m9.figshare.1512836
title: Datasets of three social networks in PLOS ONE 2015 paper

description: All the real-world data sets are employed in the paper "<strong>Competition Between Homophily and Information Entropy Maximization in Social Networks</strong>", which will be published in <strong><em>PLOS ONE 2015</em></strong>. Three soical networks are included, in which CA-HepPh .txt is a collaboration network from the e-print arXiv(http://www.arxiv.org) and covers scientific collaborations between authors of papers submitted to High Energy Physics, neworleans-links-connected.txt is the giant component of the Facebook network in New Orleans (all node ids are converted to random numbers), jure_Email-Enron.txt is an email communication network that covers all the email communication within a data set of around half million emails. In each file, one line represtnes an edge and two nodes are seperated by a Tab. The demo code to read the graph can be found in test.py. <strong>These datasets are obtained from public available soruces in the Internet and their original download links or contacts can also be found as follows: </strong> <strong>CA-HepPh:</strong> <em>http://snap.stanford.edu/data/ca-HepPh.html</em> <strong>NewOrleans:</strong> <em>http://socialnetworks.mpi-sws.org/datasets.html</em> <strong>Email-Enron:</strong> <em>http://snap.stanford.edu/data/email-Enron.html</em>
DOI: 10.6084/m9.figshare.1513734.v3
title: Patient E

description: R workspace format. Variable "series" is the multivariate time series with time, scalp and FOE activity. The first column corresponds to time<br>(in minutes). The following 16 channels correspond to scalp electrodes (2:9 left scalp electrodes and 10:17 right scalp electrodes). The remaining columns correspond to FOE, left and right respectively. The variable "onset" determines the time of seizure onset (in minutes). Sampling frequency=200 Hz. # of channels 28 (8 + 8 scalp and 6 + 6 FOE).
DOI: 10.6084/m9.figshare.1512821
title: Example of use of FaBiO #3

description: Associating keywords, subject terms and disciplines to a paper.
DOI: 10.6084/m9.figshare.1512834
title: Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

description: In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.
DOI: 10.6084/m9.figshare.1513734.v2
title: Patient E

description: Initial part of EEG recording of patient E
DOI: 10.6084/m9.figshare.1512835.v1
title: Factors Associated to Prevalence and Incidence of Carbapenem-Resistant Enterobacteriaceae Fecal Carriage

description: clinical dataset
DOI: 10.6084/m9.figshare.1512819
title: Example of use of FaBiO #1

description: Describing a bibliographic entity
DOI: 10.6084/m9.figshare.1512820
title: Example of use of FaBiO #2

description: Specifying ordered lists of authors.
DOI: 10.6084/m9.figshare.1512836.v2
title: Datasets of three social networks in PLOS ONE 2015 paper

description: All the real-world data sets are employed in the paper "<strong>Competition Between Homophily and Information Entropy Maximization in Social Networks</strong>", which will be published in <strong><em>PLOS ONE 2015</em></strong>. Three soical networks are included, in which CA-HepPh .txt is a collaboration network from the e-print arXiv(http://www.arxiv.org) and covers scientific collaborations between authors of papers submitted to High Energy Physics, neworleans-links-connected.txt is the giant component of the Facebook network in New Orleans (all node ids are converted to random numbers), jure_Email-Enron.txt is an email communication network that covers all the email communication within a data set of around half million emails. In each file, one line represtnes an edge and two nodes are seperated by a Tab. The demo code to read the graph can be found in test.py. <strong>These datasets are obtained from public available soruces in the Internet and their original download links or contacts can also be found as follows: </strong> <strong>CA-HepPh:</strong> <em>http://snap.stanford.edu/data/ca-HepPh.html</em> <strong>NewOrleans:</strong> <em>http://socialnetworks.mpi-sws.org/datasets.html</em> <strong>Email-Enron:</strong> <em>http://snap.stanford.edu/data/email-Enron.html</em>
DOI: 10.6084/m9.figshare.1512818
title: Example of use of CiTO #3

description: Annotating an in-text reference pointer with a citation function
DOI: 10.6084/m9.figshare.1512818.v1
title: Example of use of CiTO #3

description: Annotating an in-text reference pointer with a citation function
DOI: 10.6084/m9.figshare.1512819.v1
title: Example of use of FaBiO #1

description: Describing a bibliographic entity
DOI: 10.6084/m9.figshare.1512820.v1
title: Example of use of FaBiO #2

description: Specifying ordered lists of authors.
DOI: 10.6084/m9.figshare.1512836.v1
title: Datasets of social networks in PLOS ONE 2015 paper

description: All the real-world data sets employed in the paper "Competition Between Homophily and Information Entropy Maximization in Social Networks", which wil lbe published in PLOS ONE. Three soical networks are included, in which CA-HepPh .txt is a collaboration network from the e-print arXiv(http://www.arxiv.org) and covers scientific collaborations between authors of papers submitted to High Energy Physics, neworleans-links-connected.txt is the giant component of the Facebook network in New Orleans (all node ids are converted to random numbers), jure_Email-Enron.txt is an email communication network that covers all the email communication within a data set of around half million emails. In each file, one line represtnes an edge and two nodes are seperated by a Tab. The demo code to read the graph can be found in test.py. These datasets are obtained from public available soruces in the Internet and their original download links or contacts can be found as follows: CA-HepPh: http://snap.stanford.edu/data/ca-HepPh.html NewOrleans: http://socialnetworks.mpi-sws.org/datasets.html Email-Enron: http://snap.stanford.edu/data/email-Enron.html
DOI: 10.6084/m9.figshare.1512815
title: Glucose-6-Phosphate Dehydrogenase Deficiency and haemoglobin drop after Sulphadoxine-Pyrimethamine use for Intermittent Preventive Treatment of Malaria during pregnancy in Ghana - a cohort study.

description: Data from a study done in Ghana, West Africa involving a cohort of 1518 pregnant women who received Sulphadoxine Pyrimethamine for Intermittent Preventive Therapy for malaria in pregnancy as part of their normal antenatal care. Their G6PD status were determined at enrollment followed by assessments on days 3, 7,14 and 28 to document any adverse effects and changes in post-IPTp haemoglobin (Hb) levels.
DOI: 10.6084/m9.figshare.1512816
title: Example of use of CiTO #1

description: Defining citation links and their functions.
DOI: 10.6084/m9.figshare.1512817
title: Example of use of CiTO #2

description: Annotating a citation act with an additional text-defined citation function.
DOI: 10.6084/m9.figshare.1512834.v2
title: Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

description: In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.
DOI: 10.6084/m9.figshare.1512815.v1
title: Glucose-6-Phosphate Dehydrogenase Deficiency and haemoglobin drop after Sulphadoxine-Pyrimethamine use for Intermittent Preventive Treatment of Malaria during pregnancy in Ghana - a cohort study.

description: Data from a study done in Ghana, West Africa involving a cohort of 1518 pregnant women who received Sulphadoxine Pyrimethamine for Intermittent Preventive Therapy for malaria in pregnancy as part of their normal antenatal care. Their G6PD status were determined at enrollment followed by assessments on days 3, 7,14 and 28 to document any adverse effects and changes in post-IPTp haemoglobin (Hb) levels.
DOI: 10.6084/m9.figshare.1512816.v1
title: Example of use of CiTO #1

description: Defining citation links and their functions.
DOI: 10.6084/m9.figshare.1512812
title: Dados da pesquisa sobre ciúme romântico

description: Dados de uma pesquisa sobre o ciúme romântico, oriundos do Inventário de Ciúme Romântico (ICR). A amostra da presente pesquisa consiste em 400 pessoas de Vitória da Conquista (Bahia), com idades variando entre 18 e 76 anos (M = 29,96; DP = 11,73). Dos participantes, 62% são do sexo feminino, 94% são heterossexuais, 42% são casados ou moram com algum parceiro(a), 36% são solteiros e 22% possuem algum tipo de relacionamento amoroso. Cerca de 39,20% dos participantes possuem filhos, a mediana do número de relacionamentos que tiveram na vida é de 2. Com relação à escolaridade dos participantes, 37% possuem o ensino médio completo, 19% possuem ensino superior completo, 12% possuem o ensino médio incompleto, 10% possuem o ensino fundamental incompleto, 7% o ensino fundamental completo e 4% não informaram a escolaridade. No que diz respeito à religião, 56% são católicos, 30% são evangélicos e 14% são de alguma outra religião ou se consideram ateus. A idade mediana da primeira relação sexual é de 16 anos, 4,76% afirmam ter sofrido algum tipo de abuso sexual, 4,52% afirmam ter sofrido algum tipo de abuso físico e 15,91% afirmam ter sofrido algum tipo de abuso psicológico. A mediana do número de relações sexuais mensais é de 8; 31,20% afirmam terem traído algum parceiro(a) ao longo da vida e 46,37% afirmam terem sido traídos por algum parceiro(a). Considerando apenas os participantes que são casados ou que moram com algum parceiro(a) e os que possuem algum outro tipo de relacionamento amoroso, 19,84% afirmam que já traíram o parceiro(a) atual e 24,5% afirmam que o parceiro(a) atual já os traiu.
DOI: 10.6084/m9.figshare.1512834.v3
title: Localized Protein Quantification of Blood Brain Barrier Vasculature in Brightfield IHC Images

description: In this paper, we present an objective method for locally quantifying proteins in blood brain barrier (BBB) vasculature using standard immunohistochemistry (IHC) techniques and bright-field microscopy. Images from the hippocampal region at the BBB are acquired using bright-field microscopy and subjected to our immunohistochemistry quantification (IQ) algorithm which is designed to automatically identify and segment microvessels containing the protein glucose transporter 1 (GLUT1). Gabor filtering and k-means clustering are employed to isolate potential vascular structures within cryopsectioned slabs of the hippocampus, which are subsequently subjected to feature extraction followed by classification via decision forest. The false positive rate (FPR) of microvessel classification is characterized using synthetic and non-synthetic IHC image data for image entropies ranging between 3 and 8 bits. The average FPR for synthetic and non-synthetic IHC image data was found to be 5.48% and 5.04%, respectively.
DOI: 10.6084/m9.figshare.1512808
title: Shod Human on Rippled beach sand

description: Human footprint on a heavily rippled beach. Sole of shoe clear.<br>Notes: Interesting preservation in the slip/fault of the centre section of substrate during toe-off.