cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/hjzkdf64d3.1
title: An Energy Efficient Clustering Scheme based on K-center clustering for Wireless Sensor Networks

description: This is the simulation software developed for "An Energy Efficient Clustering Scheme based on K-center clustering for Wireless Sensor Networks".
DOI: 10.17632/kdywxnn729.3
title: Indel strand asymmetries at repeat tracts in cancer

description: The mechanisms that underpin how insertions or deletions (indels) become fixed in DNA have primarily been ascribed to replication-related and/or double-strand break (DSB)-related processes. We introduce a novel way to evaluate indels, orientating them relative to gene transcription. In so doing, we reveal a number of surprising findings: First, there is a transcriptional strand asymmetry in the distribution of mononucleotide repeat tracts in the reference human genome. Second, there is a strong transcriptional strand asymmetry of indels across 2,575 whole genome sequenced human cancers. We suggest that this is due to the activity of transcription-coupled nucleotide excision repair (TC-NER). Furthermore, TC-NER interacts with mismatch repair (MMR) under physiological conditions to produce strand bias. Finally, we show how insertions and deletions differ in their dependencies on these repair pathways. Our new analytical approach reveals new insights into the contribution of DNA repair towards indel mutagenesis in human cells.
DOI: 10.21958/phenotype:545
title: clim-aet12

description: Actual evapotranspiration of December (mm)
DOI: 10.21958/phenotype:546
title: clim-aet2

description: Actual evapotranspiration of February (mm)
DOI: 10.21958/phenotype:547
title: clim-aet3

description: Actual evapotranspiration of March (mm)
DOI: 10.21958/phenotype:548
title: clim-aet4

description: Actual evapotranspiration of April (mm)
DOI: 10.21958/phenotype:549
title: clim-aet5

description: Actual evapotranspiration of May (mm)
DOI: 10.21958/phenotype:550
title: clim-aet6

description: Actual evapotranspiration of June (mm)
DOI: 10.21958/phenotype:551
title: clim-aet7

description: Actual evapotranspiration of July (mm)
DOI: 10.21958/phenotype:552
title: clim-aet8

description: Actual evapotranspiration of August (mm)
DOI: 10.21958/phenotype:553
title: clim-aet9

description: Actual evapotranspiration of September (mm)
DOI: 10.5281/zenodo.3366143
title: Gender Specific Cannibalism in male Phytoseiulus persimilis.

description: This dataset was used to research if cannibalism by male <em>Phytoseiulus</em> <em>persimilis</em> was reared towards a specific gender. This was done by comparing the sex ratios in groups of individuals that experienced cannibalism in the larval stage to those who did not.
DOI: 10.5281/zenodo.3366144
title: Gender Specific Cannibalism in male Phytoseiulus persimilis.

description: This dataset was used to research if cannibalism by male <em>Phytoseiulus</em> <em>persimilis</em> was reared towards a specific gender. This was done by comparing the sex ratios in groups of individuals that experienced cannibalism in the larval stage to those who did not.
DOI: 10.5286/isis.e.rb1969002
title: investigate the magnetic correlations of MnSi in 3D

description: he recent discovery of skyrmions and skyrmion lattices in materials with no inversion symmetry and their corresponding potential applications of Skyrmions in magnetic information storage and processing devices has increased the scientific interest in these chiral materials. The archetype chiral system is MnSi, on which various studies have been performed. Recent findings point out to new mechanisms for stabilising new chiral magnetic phases and skyrmion correlations at low temperatures. In order to test the validity of these predictions we propose to map the magnetic correlations of MnSi in 3D by using the unique capabilities of the 3D magnetic field cryomagnet of ISIS.
DOI: 10.5286/isis.e.rb1969002-1
title: investigate the magnetic correlations of MnSi in 3D

description: he recent discovery of skyrmions and skyrmion lattices in materials with no inversion symmetry and their corresponding potential applications of Skyrmions in magnetic information storage and processing devices has increased the scientific interest in these chiral materials. The archetype chiral system is MnSi, on which various studies have been performed. Recent findings point out to new mechanisms for stabilising new chiral magnetic phases and skyrmion correlations at low temperatures. In order to test the validity of these predictions we propose to map the magnetic correlations of MnSi in 3D by using the unique capabilities of the 3D magnetic field cryomagnet of ISIS.
DOI: 10.17632/d5p6gfbdmp.1
title: Neuronal counts of the Anterior Piriform Cortex in 6 mammals

description: This repository contains Neurolucida files showing the density counts for 6 species of mammals (across 12 animals). The data set can also be used for estimating the volumes and surface areas of anterior piriform cortex, as a well as an analysis of neuron density counts. The data shows that as piriform cortex size increases, the surface area density, i.e., the number of neurons underneath 1 square mm of piriform cortex, decreases. Additionally, the number of synapses made by each neuron with axons from the olfactory bulb increases. These 2 results have two consequences as described in the attached reference paper of this dataset. 1. The number of piriform neurons and bulb glomeruli are related by the relationship n ~ g^(3/2). 2. The average number of synapses between each glomerulus and piriform neuron is invariant at 1. For details of how the data were gathered, please see the experimental procedures section of the reference paper.
DOI: 10.17638/datacat.liverpool.ac.uk/692
title: Ketogenic Diets as an Adjuvant Therapy in Glioblastoma (The KEATING trial)

description: See README document
DOI: 10.21958/phenotype:554
title: clim-bio1
DOI: 10.21958/phenotype:555
title: clim-bio10

description: Mean Temperature of Warmest Quarter (_C)
DOI: 10.21958/phenotype:556
title: clim-bio11

description: Mean Temperature of Coldest Quarter (_C)
DOI: 10.21958/phenotype:557
title: clim-bio12

description: Annual Precipitation (mm)
DOI: 10.21958/phenotype:558
title: clim-bio13

description: Precipitation of Wettest Month (mm)
DOI: 10.21958/phenotype:559
title: clim-bio14

description: Precipitation of Driest Month (mm)
DOI: 10.21958/phenotype:560
title: clim-bio15

description: Precipitation Seasonality (Coefficient of Variation)
DOI: 10.21227/55ca-e244
title: The USyd Campus Dataset

description: Vision and lidar are complementary sensors that are incorporated into many applications of intelligent transportation systems. These sensors have been used to great effect in research related to perception, navigation and deep-learning applications. Despite this success, the validation of algorithm robustness has recently been recognised as a major challenge for the massive deployment of these new technologies. It is well known that algorithms and models trained or tested with a particular dataset tend not to generalise well for other scenarios. For certain applications, autonomous vehicles in particular, algorithm failures can lead to potentially catastrophic consequences. To minimise this risk, it is essential to evaluate the robustness and reliability of algorithms before deploying them in real life applications. This paper presents a long-term, large-scale dataset collected over the period of 1.5 years on a weekly basis over the University of Sydney campus and surrounds. The USyd Campus Dataset has been designed to aid in the development, validation and testing of algorithm robustness under a wide variety of conditions. It includes multiple sensor modalities and covers various environmental conditions as well as diverse changes to illumination, scene structure, and pedestrian/vehicle traffic volumes. The dataset also includes a semantic segmentation dataset with different illumination conditions and camera perspectives, and a ‘Road’ class image dataset which is automatically generated using lidar. To facilitate the dataset use by researchers and practitioners, we also provide a set of development tools for the analysis and visualisation of the dataset.
DOI: 10.17632/3krvgny94n.1
title: Data for: Executive Function and physical Function among Community-Dwelling Egyptian Older Adults

description: This data set includes data about community-dwelling older persons attending social clubs in Cairo, Egypt.
DOI: 10.17632/py946nnczm.1
title: Data for: Thermo-micro-mechanical simulation of bulk metal forming processes

description: #TMM-FE-Simulation This repository is created for sharing Abaqus material subroutines and finite element (FE) models for thermo-micro-mechanical (TMM) FE simulation of metal forming processes.
DOI: 10.17632/ywsx639ybw.1
title: Data for Li et al. "An Experimental Study of Matrix Dissolution and Wormhole Formation Using Gypsum Core Flood Tests. Part I: Permeability Evolution and Wormhole Geometry Analysis"

description: This data set compiles the pressure data and wormhole geometries of the seven core flood tests.
DOI: 10.5281/zenodo.3366152
title: Dataset from: "Separate and combined effects of action relevance and motivational value on visual working memory"

description: Dataset from the following publication: Heuer, A., & Schubö, A. (2018). Separate and combined effects of action relevance and motivational value on visual working memory. <em>Journal of Vision, 18</em>, 14.
DOI: 10.5281/zenodo.3366153
title: Dataset from: "Separate and combined effects of action relevance and motivational value on visual working memory"

description: Dataset from the following publication: Heuer, A., & Schubö, A. (2018). Separate and combined effects of action relevance and motivational value on visual working memory. <em>Journal of Vision, 18</em>, 14.
DOI: 10.17632/7ndk9t84gf.1
title: Data for : Mobile Phone Use in Adults Who Self-Identify as Being 'Very Stressed Out' or 'Zen'

description: This dataset was used to assess the relationship between mobile phone use and psychological stress levels in a submitted manuscript.
DOI: 10.17632/y5k6xhhw6v.2
title: Real-Time Distinguishing of the Xylene Isomers Using Photoionisation and Dissociation Mass Spectra Obtained by Femtosecond Laser Mass Spectrometry (FLMS)

description: Multiphoton ionisation (MPI) dissociative ionisation of xylene isomers was investigated by means of the femtosecond (fs) laser mass spectrometry (FLMS) method using a custom-built linear time of flight (TOF) mass spectrometer. (Information about TOF-MS system: https://doi.org/10.1016/j.ijms.2009.12.014)
DOI: 10.17632/b8ybw4shv3.1
title: Neural Correlates of Optimal Multisensory Decision Making under Time-Varying Reliabilities with an Invariant Linear Probabilistic Population Code. Hou et al

description: Each .mat file stores each cell's raw data (e.g., spike trains and monkey's behavioral events) as well as pre-processed data (e.g., smoothed PSTHs for different conditions). All experimental figures can be reproduced by running the Matlab GUI in the GitHub repository: /Labtools/HH_Tools/GROUP_GUI.fig.
DOI: 10.17632/gwbj34yjzc.1
title: EVALUATION OF THE IMPACT OF ORAL HYGIENE ASSOCIATED WITH CHAMOMILE TEA IN THE DEVELOPMENT OF ORAL MUCOSITIS IN CANCER PATIENTS UNDERGOING CHEMOTHERAPY – PILOT STUDY

description: The objective of this study was to evaluate the influence of the use of chamomile tea associated with a rigorous oral hygiene in the OM’s prevention. It was a randomized pilot clinical study, in which thirty-five patients were allocated into two groups. The case group underwent oral hygiene control associated with the use of chamomile tea before starting the first cycle of chemotherapy, and in the control group, there were no previous guidelines and prescriptions. Data regarding sociodemographic characteristics, the neoplasia in question and the type of chemotherapy treatment proposed were collected. The variables OM, salivary flow and pain associated to the oral cavity were evaluated, and statistical analysis was performed with significance level p &lt;0.05. It was observed that the majority of the patients had a mean age of 50 years, the most prevalent tumor site was the breast (57%) and the most frequently used drug was cyclosphamide (52%). In this sample, no statistically significant result was observed between the groups regarding the OM, salivary flow and pain variables (p&gt; 0.05). These data suggest that the use of chamomile tea and the accuracy of oral hygiene were not enough to prevent OM.
DOI: 10.17632/mj94yydtmn.1
title: Mortality and potential years of life lost attributable to poor glycemic control in Emiratis with diabetes

description: The aim of this study was to estimate the fraction of deaths and potential years of life lost (PYLL) attributable to non-optimal HbA1c control among Emirati men and women with diabetes in the United Arab Emirates (UAE). This study was conducted in outpatient clinics at a tertiary care center in Al-Ain, UAE, between April 2008 and September 2018. The sample comprised of 583 adult UAE nationals, aged ≥ 18 years, with diabetes. Non-optimal HbA1c control was defined as HbA1c ≥ 6.5% and all-cause mortality was defined as death from any cause. At the end of the 9-year follow-up period, 86 (14.8%) participants died. Overall, up to 33% (95% confidence interval [CI], 2% to 63%) of deaths were attributable to non-optimal HbA1c control among patients with diabetes mellitus (DM). Stratified by sex, the adjusted fraction of avoidable mortality was 17% (95% CI, -23% to 57%) for men and 50% (95% CI, 3% to 98%) for women. Both deaths and PYLL attributable to non-optimal HbA1c control were higher in women compared to men. Up to one-third of all deaths in adult UAE nationals with DM could be attributed to non-optimal HbA1c control.
DOI: 10.25345/c5507q
title: MassIVE MSV000084198 - Patient Datasets for: Improved prediction of endogenously presented HLA class I epitopes in human tumors based on 95 mono-allelic peptidomes
title: Antigen discovery is a high priority for developing cancer immunotherapies, but remains challenging because of inter-individual variation in tumor-specific antigens and rules of antigen presentation. To enable prediction of endogenous HLA-associated peptides across a large fraction of the human population, we used mass spectrometry (MS) to profile &gt;185,000 peptides eluted from 95 HLA-A, B, C and G mono-allelic cell lines. In addition to identifying canonical peptide motifs for each of these HLA alleles, we found unique and shared binding submotifs across alleles, and distinct motifs associated with different peptide lengths. Based on the full dataset of peptides and quantitative gene expression, we learned allele-and-length-specific and pan-allele-pan-length models that integrate peptide abundance, peptide processing and allele-specific binding rules. These models predicted endogenous HLA-associated ligands with a 2-fold improvement in positive predictive value compared to existing tools and correctly identified &gt;75% of HLA-bound peptides that were observed experimentally in 12 patient tumor cell lines by MS. More accurate prediction of class I epitopes will enable antigen discovery in cancer as well as infections, autoimmunity and other immune-related conditions.
DOI: 10.5061/dryad.nd57201/1
title: The difference in fly-plant interaction frequency and parasitoid-fly interaction frequency between control and abundance-reduced plots

description: The fly-plant interaction frequency is shown in the 'fly-plant' sheet, and the parasitoid-fly interaction frequency is shown in the 'parasitoid-fly' sheet. In each sheet, the abundance of each partner species is presented.
DOI: 10.18716/nmrshiftdb2/2334
title: NMR data for Macrophyllilactone G
DOI: 10.5281/zenodo.3366175
title: Aligned DNA sequence matrixes for the study of the divergent times of phytoplasmas

description: Sequence alignments of 16S rRNA and methionine aminopeptidase (map) are provided in FASTA files “Cao_et_al_16S.fas” and “Cao_et_al_map.fas”, respectively. Detailed information of the data matrixes is as follows: File name: Cao_et_al_16S.fas Number of taxa: 220 Number of characters: 1655 Gap: - File name: Cao_et_al_map.fas Number of taxa: 83 Number of characters: 564 Gap: -
DOI: 10.5281/zenodo.3366176
title: Aligned DNA sequence matrixes for the study of the divergent times of phytoplasmas

description: Sequence alignments of 16S rRNA and methionine aminopeptidase (map) are provided in FASTA files “Cao_et_al_16S.fas” and “Cao_et_al_map.fas”, respectively. Detailed information of the data matrixes is as follows: File name: Cao_et_al_16S.fas Number of taxa: 220 Number of characters: 1655 Gap: - File name: Cao_et_al_map.fas Number of taxa: 83 Number of characters: 564 Gap: -
DOI: 10.5286/isis.e.rb1720012-5
title: How chemical interaction scale affects the dynamics of dense metallic liquids

description: Using deep inelastic neutron scattering, we plan to investigate chemical short range order on a quantitative level in liquid alloys and its correlation with the long range mass transport in the melt. We chose two alloy melts, Zr34Ni36 and Hf35Ni65, where Zr and Hf exhibit identical valence electron shell configurations and very similar chemical properties. However, the atomic dynamics in the alloy melts differ by a factor of 2. By measuring the mass-resolved, atom-projected vibrational density of states, we intend to quantify the chemical interaction in the melt in terms of the chemical interaction scale. This allows us to gain deeper insight on the interaction potentials and the electronic origin of chemical short range order in the liquid alloys, in order to understand the structure-property relation in the disordered systems.
DOI: 10.5286/isis.e.rb1920697
title: In-situ observation of Hydrogen diffusion in zirconium alloys

description: Zr is used extensively in nuclear reactors worldwide in a broad range of microstructural conditions due to its thermomechanical, corrosion and neutronic properties. However the affinity between H and Zr leaves Zr-alloys susceptible to precipitation of Zr hydride and delayed hydride cracking (DHC); a process controlled by the diffusion of H. The purpose of this work is to characterize the effect of the anisotropy of the Zr hcp lattice and the morphology of the beta-Zr phase on H mobility. Building on past experience, where we have refined a method to determine H diffusion coefficients using relatively small samples and short experimental times, we propose to follow the process of H diffusion in-situ, at operation temperatures of nuclear components (280C-350C), to better understand the anisotropy observed in H diffusion along the radial and axial directions of pressure tubes.
DOI: 10.5286/isis.e.rb1920697-1
title: In-situ observation of Hydrogen diffusion in zirconium alloys

description: Zr is used extensively in nuclear reactors worldwide in a broad range of microstructural conditions due to its thermomechanical, corrosion and neutronic properties. However the affinity between H and Zr leaves Zr-alloys susceptible to precipitation of Zr hydride and delayed hydride cracking (DHC); a process controlled by the diffusion of H. The purpose of this work is to characterize the effect of the anisotropy of the Zr hcp lattice and the morphology of the beta-Zr phase on H mobility. Building on past experience, where we have refined a method to determine H diffusion coefficients using relatively small samples and short experimental times, we propose to follow the process of H diffusion in-situ, at operation temperatures of nuclear components (280C-350C), to better understand the anisotropy observed in H diffusion along the radial and axial directions of pressure tubes.
DOI: 10.5281/zenodo.3366167
title: Bibliography on criteria for assessing the quality of scientific publications

description: The data deposited here consist of references to literature that was evaluated during the development of a qualitative survey and an online questionnaire on the qualitative perception of scientific publications. In preparation for these qualitative interviews and the online survey, a literature study on the qualitative perceptions of scientific literature was conducted in January and February 2018. The focus was on the question which internal characteristics, i.e. in the narrower sense content-related factors, influence the perception of a publication as qualitatively valuable or poor. External characteristics as citation counts should not be at the centre of the research - knowing that they control qualitative perception - since their effect on the perception of the quality of a publication is sufficiently discussed (see e.g. Dong, Loh, & Mondry, 2005).<br> The literature study was based on the results of a search in the databases Web of Science, Scopus, Library, Information Science & Technology Abstracts and the search engine Google Scholar. VisOA_full_results.bib includes references that were considered valuable in principle, VisOA.bib only those that have been considered in the development of the survey instruments.
description: Gefördert vom Bundesministeriums für Bildung und Forschung (BMBF) "Förderrichtlinie des freien Informationsflusses in der Wissenschaft – Open Access des Bundesministeriums für Bildung und Forschung (BMBF)" Vorhaben: Sichtbarmachung von Open-Access-Publikationen in den Nachweisinstrumenten einer Bibliothek - visOA Ausführende Stelle: Leibniz-Institut für Neue Materialien gGmbH (INM) Projektleitung: Uwe Geith Förderkennzeichen: 16OA060 Funded by the Federal Ministry of Education and Research (BMBF) "Programme for the Free Flow of Information in Science - Open Access of the Federal Ministry of Education and Research (BMBF)" Project: Making Open Access publications visible in the holdings of a library - visOA Executing authority: Leibniz Institute for New Materials gGmbH (INM) Project Management: Uwe Geith Grant reference number: 16OA060
DOI: 10.5281/zenodo.3366168
title: Bibliography on criteria for assessing the quality of scientific publications

description: The data deposited here consist of references to literature that was evaluated during the development of a qualitative survey and an online questionnaire on the qualitative perception of scientific publications. In preparation for these qualitative interviews and the online survey, a literature study on the qualitative perceptions of scientific literature was conducted in January and February 2018. The focus was on the question which internal characteristics, i.e. in the narrower sense content-related factors, influence the perception of a publication as qualitatively valuable or poor. External characteristics as citation counts should not be at the centre of the research - knowing that they control qualitative perception - since their effect on the perception of the quality of a publication is sufficiently discussed (see e.g. Dong, Loh, & Mondry, 2005).<br> The literature study was based on the results of a search in the databases Web of Science, Scopus, Library, Information Science & Technology Abstracts and the search engine Google Scholar. VisOA_full_results.bib includes references that were considered valuable in principle, VisOA.bib only those that have been considered in the development of the survey instruments.
description: Gefördert vom Bundesministeriums für Bildung und Forschung (BMBF) "Förderrichtlinie des freien Informationsflusses in der Wissenschaft – Open Access des Bundesministeriums für Bildung und Forschung (BMBF)" Vorhaben: Sichtbarmachung von Open-Access-Publikationen in den Nachweisinstrumenten einer Bibliothek - visOA Ausführende Stelle: Leibniz-Institut für Neue Materialien gGmbH (INM) Projektleitung: Uwe Geith Förderkennzeichen: 16OA060 Funded by the Federal Ministry of Education and Research (BMBF) "Programme for the Free Flow of Information in Science - Open Access of the Federal Ministry of Education and Research (BMBF)" Project: Making Open Access publications visible in the holdings of a library - visOA Executing authority: Leibniz Institute for New Materials gGmbH (INM) Project Management: Uwe Geith Grant reference number: 16OA060