cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/df5gcyjcc2.1
title: LDHU3_05.0550

description: monocarboxylate transporter-like protein | riboflavin transporter | RibJ
Leishmania donovani (HU3 strain)
DOI: 10.17632/npcxn4wk62.1
title: LDHU3_05.0560

description: hypothetical protein - conserved
Leishmania donovani (HU3 strain)
DOI: 10.17632/fgds5fzszs.1
title: LDHU3_05.0530

description: NOG2
Leishmania donovani (HU3 strain)
DOI: 10.17632/56rkm6mswh.2
title: A Reversal in the Global Decline of the Labor Share

description: This is the data set used in the paper "A Reversal in the Global Decline of the Labor Share?" by Selen Andic and Michael C. Burda (2021), forthcoming article in the Economics Letters. The data set includes 124 countries and spans the period 1980-2017. It is constructed using publicly available data from AMECO, IMF, OECD and PWT 9.1.
DOI: 10.17632/2pfs5w9bbv.1
title: Statistical analysis

description: R codes
DOI: 10.17632/fs7mtkg2wk.1
title: Dataset of Deep Learning from Landsat-8 Satellite Images for Estimating Burned Areas in Indonesia

description: The dataset consist of three categories; image subsets, burned area masks and quicklooks. The image subsets are derived from Landsat-8 scenes taken during the years 2019 and 2021. Each image has a size of 512x512 pixels and consists of 8 multispectral. The sequence of band names from band 1 to band 7 of the image subset is same as the sequence of band names of landsat-8 scene, except for band 8 of the image subset which is band 9 (cirrus band) in the original landsat-8 scene. The image subsets are saved in GeoTIFF file format with the latitude longitude coordinate system and WGS 1984 as the datum. The spatial resolution of image subsets is 0.00025 degree and the pixel values are stored in 16 bit unsigned integer with the range of value from 0 to 65535. The total number of dataset is 227 images with contains many variation of back-ground such as cloud, shadow, vegetation, water body, barren land and settlement. In some cases, there are some image subsets with the burned areas covered by smoke due to the fire is still active. Some image subsets also overlap each other to cover the area of burned scar which the area is too large.
The burned area mask is a binary annotation image which consists of two classes; burned area as the foreground and non-burned area as the background. These binary images are saved in 8 bit unsigned integer where the burned area is indicated by the pixel value of 255, whereas the non-burned area is indicated by 0. The burned area masks in this dataset contain only burned scars and are not contaminated with thick clouds, shadows, and vegetation. Among 227 images, 206 images contain burned areas whereas 21 images contain only background. The highest number of images in this dataset is dominated by images with coverage percentage of burned area between 0 and 10 percent.
Our dataset also provides quicklook image as a quick preview of image subset. It offers a fast and full size preview of image subset without opening the file using any GIS software. The quicklook images can also be used for training and evaluating the model as a substitute of image subsets. The image size is 512x512 pixels same as the size of image subset and annotation image. It consists of three bands as RGB composite image, with combination of band 7 (SWIR-2), band 5 (NIR), and band 4 (red). These RGB composite images have been performed contrast stretching to enhance the images visualizations. The quicklook images are stored in GeoTIFF file format with 8 bit unsigned integer.
DOI: 10.17632/xfm5wtmyx8.1
title: Data used for a meta-analysis

description: Figure S1 Relationships between rainfall and warming responses on GEP and NEE
Figure S2 Warming effect on leaf δ15N indicated by the “Hedges’d index”
Table S1 Published meta-analyses on warming responses in permafrost C and nutrient cycling
Table S2 Data on soil temperature, soil mositure, ecosystem C flux, vegetation biomass, soil C, microbial biomass, and soil N
Table S3 Data on green leaf N
Table S4 Publication bias assessed with Egger's test
Table S5 Between-group heterogeneity (Qb)
DOI: 10.17632/whybmf976p.1
title: DNA repair enzyme NEIL3 enables a stable neural representation of space by shaping transcription in hippocampal neurons

description: Recording the activity of hippocampal CA1 place cells in freely moving wildtype and Neil3-/- mice.
DOI: 10.5281/zenodo.5541259
title: Raw data

description: Raw data from Padova time series. The series is composed by the raw muons counts to obtain all the result in the paper
DOI: 10.5281/zenodo.5541258
title: Raw data

description: Raw data from Padova time series. The series is composed by the raw muons counts to obtain all the result in the paper
DOI: 10.6084/m9.figshare.16707196.v1
title: Post-disaster Housing Reconstruction in a Philippine Estuarine Island Case 2: Estella

description: This is part of a series of case write-ups developed from ethnographic data collection activities (using a combination of remote and in-situ methods due to Covid-19 restrictions) in Isla Sasa, a Philippine estuarine island, from 2020 to 2021 (ongoing as of writing). The data collection was conducted as part of the author’s doctoral research on design and citizenship practices within post-disaster housing reconstruction for the School of Architecture and Urban Design at RMIT University. Data collection focused on adult householders who suffered from either housing loss or damage after Super Typhoon Glenda in 2014 (international name: Rammasun), the most destructive storm on the island and one of the most destructive storms in the Philippines. Aside from exposure to typhoons, inhabitants of the four-hectare island also suffer from intense flooding that can be traced to land subsidence and sea level rise. The interview for Case 2 was conducted using a mobile phone and arranged through the assistance of a community health worker residing in the island follow research ethics protocols approved by the RMIT Human Research Ethics Committee. The interview was conducted in Tagalog. The interview was transcribed and this summary is based on the transcription.
DOI: 10.6084/m9.figshare.16707196
title: Post-disaster Housing Reconstruction in a Philippine Estuarine Island Case 2: Estella

description: This is part of a series of case write-ups developed from ethnographic data collection activities (using a combination of remote and in-situ methods due to Covid-19 restrictions) in Isla Sasa, a Philippine estuarine island, from 2020 to 2021 (ongoing as of writing). The data collection was conducted as part of the author’s doctoral research on design and citizenship practices within post-disaster housing reconstruction for the School of Architecture and Urban Design at RMIT University. Data collection focused on adult householders who suffered from either housing loss or damage after Super Typhoon Glenda in 2014 (international name: Rammasun), the most destructive storm on the island and one of the most destructive storms in the Philippines. Aside from exposure to typhoons, inhabitants of the four-hectare island also suffer from intense flooding that can be traced to land subsidence and sea level rise. The interview for Case 2 was conducted using a mobile phone and arranged through the assistance of a community health worker residing in the island follow research ethics protocols approved by the RMIT Human Research Ethics Committee. The interview was conducted in Tagalog. The interview was transcribed and this summary is based on the transcription.
DOI: 10.6084/m9.figshare.16707244.v1
title: Harpy Eagle climate change SDMs

description: Data to support publication DOI:
DOI: 10.25919/ejg3-p840
title: Parkes observations for project P1105 semester 2021APRS_04

description: We have re-processed all the observations in the Parkes pulsar data archive obtained during the first four years of the Parkes multibeam receiver and have developed a new artificial intelligence (AI) algorithm to investigate huge volume of candidates. Except for our previous detections, the latest results include 87 new fast radio burst (FRB) candidates with S/N above 7. These signals were only detected in a single beam of the receiver suggesting that they are unlikely to be terrestrial. Their dispersion measure (DM) excesses over the estimated Galactic DM place them at extragalactic distances. Using the Ultra Wideband Low (UWL) receiver we have opportunity to detect repeating signals from some of these FRB candidates. As all these signals were detected in the 20 cm band, the UWL provides the opportunity to observe stronger emission in other observing bands.
DOI: 10.6084/m9.figshare.16602320.v2
title: Model data

description: Raw model activations to 2,162 faces
DOI: 10.6084/m9.figshare.16602311.v2
title: 46 features for face description

description: Description of how 17 feature descriptors were chosen from the set of 46
DOI: 10.5281/zenodo.5536982
title: Data from: All-season space use by non-native resident Mandarin Ducks (Aix galericulata) in northeastern Germany

description: Data from article "All-season space use by non-native resident Mandarin Ducks (<em>Aix galericulata</em>) in northeastern Germany", accepted for publication in Journal of Ornithology in 2021. <strong>Article abstract:</strong> Patterns of space use are often subject to large temporal and individual-level variation, due to seasonality in behaviour and environmental conditions as well as age- or sex-specific needs. Especially in temperate regions, seasonality likely influences space use even in non-migratory birds. In waterfowl of the family <em>Anatidae</em>, however, few studies have analyzed space use of the same individuals across the full annual cycle. We used a resident population of Mandarin Ducks (<em>Aix galericulata</em>) in northeast Germany to study their year-round space use in relation to season, sex, and age. We marked 172 birds with colour rings and surveyed relevant water bodies for re-encounters for several years. As space-use patterns we derived home ranges from minimum convex polygons and the number of water bodies used by individual birds. Our analysis revealed that individuals shifted their space use between seasons, in particular extending their home ranges during the non-breeding season. Between years, in contrast, birds tended to show season-specific site fidelity. Sex differences were apparent during both breeding and non-breeding season, male consistently having larger home ranges and using slightly more water bodies. No difference was found between first-year and adult birds. Our study demonstrates that mark-resighting can provide valuable information about space use in species with suitable behaviour and readily accessible habitat. In such cases, it may be a valid alternative to more expensive GPS-tracking or short-term manual radio telemetry, particularly within citizen-science projects. <strong>Data description:</strong> Mark-resight data on Mandarin ducks in the Potsdam/Berlin region, Germany. Each sighting (including capture and ringing event) contains information about: - individual with sex and age specification - date, season, sub-season as defined in article - coordinates of sighting location: Gauss-Krüger coordinate system with right (R; Rechtswert) and high (H; Hochwert) value. For distinction between "fine" and "coarse" coordinates, see article. Water body names refer to the "coarse" site specification.
DOI: 10.5281/zenodo.5536981
title: Data from: All-season space use by non-native resident Mandarin Ducks (Aix galericulata) in northeastern Germany

description: Data from article "All-season space use by non-native resident Mandarin Ducks (<em>Aix galericulata</em>) in northeastern Germany", accepted for publication in Journal of Ornithology in 2021. <strong>Article abstract:</strong> Patterns of space use are often subject to large temporal and individual-level variation, due to seasonality in behaviour and environmental conditions as well as age- or sex-specific needs. Especially in temperate regions, seasonality likely influences space use even in non-migratory birds. In waterfowl of the family <em>Anatidae</em>, however, few studies have analyzed space use of the same individuals across the full annual cycle. We used a resident population of Mandarin Ducks (<em>Aix galericulata</em>) in northeast Germany to study their year-round space use in relation to season, sex, and age. We marked 172 birds with colour rings and surveyed relevant water bodies for re-encounters for several years. As space-use patterns we derived home ranges from minimum convex polygons and the number of water bodies used by individual birds. Our analysis revealed that individuals shifted their space use between seasons, in particular extending their home ranges during the non-breeding season. Between years, in contrast, birds tended to show season-specific site fidelity. Sex differences were apparent during both breeding and non-breeding season, male consistently having larger home ranges and using slightly more water bodies. No difference was found between first-year and adult birds. Our study demonstrates that mark-resighting can provide valuable information about space use in species with suitable behaviour and readily accessible habitat. In such cases, it may be a valid alternative to more expensive GPS-tracking or short-term manual radio telemetry, particularly within citizen-science projects. <strong>Data description:</strong> Mark-resight data on Mandarin ducks in the Potsdam/Berlin region, Germany. Each sighting (including capture and ringing event) contains information about: - individual with sex and age specification - date, season, sub-season as defined in article - coordinates of sighting location: Gauss-Krüger coordinate system with right (R; Rechtswert) and high (H; Hochwert) value. For distinction between "fine" and "coarse" coordinates, see article. Water body names refer to the "coarse" site specification.
DOI: 10.15161/oar.it/74145
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.6084/m9.figshare.16707244.v2
title: Harpy Eagle climate change SDMs

description: Data to support publication DOI:
DOI: 10.6084/m9.figshare.16707754.v1
title: Data Matrix 40 10AA

description: 40_NNConcatenate with Phylosuite
DOI: 10.6084/m9.figshare.16707754
title: Data Matrix 40 10AA

description: 40_NNConcatenate with Phylosuite
DOI: 10.5258/soton/d1914
title: Dataset for A broadband 2x2 multimode interference coupler for mid-infrared wavelengths

description: This dataset supports the publication: Callum J. Stirling, Robert Halir, Alejandro Sanchez-Postigo, Zhibo Qu, Jamie D. Reynolds, Jordi Soler Penades, Ganapathy Senthil Murugan, Alejandro Ortega-Monux, J. Gonzalo Wanguemert-Perez, Inigo Molina-Fernandez, Goran Z. Mashnovich and Milos Nedeljkovic. (2021) A broadband 2x2 multimode interference coupler for mid-infrared wavelengths, Optics Letters
DOI: 10.6084/m9.figshare.16707766
title: Post-disaster Housing Reconstruction in a Philippine Estuarine Island Case 3: Nina

description: This is part of a series of case write-ups developed from ethnographic data collection activities (using a combination of remote and in-situ methods due to Covid-19 restrictions) in Isla Sasa, a Philippine estuarine island, from 2020 to 2021 (ongoing as of writing). The data collection was conducted as part of the author’s doctoral research on design and citizenship practices within post-disaster housing reconstruction for the School of Architecture and Urban Design at RMIT University. Data collection focused on adult householders who suffered from either housing loss or damage after Super Typhoon Glenda in 2014 (international name: Rammasun), the most destructive storm on the island and one of the most destructive storms in the Philippines. Aside from exposure to typhoons, inhabitants of the four-hectare island also suffer from intense flooding that can be traced to land subsidence and sea level rise. The interview for Case 3 was conducted using a mobile phone and arranged through the assistance of a community health worker residing in the island, following research ethics protocols approved by the RMIT Human Research Ethics Committee. The interview was conducted in Tagalog. The interview was transcribed and this summary is based on the transcription.
DOI: 10.6084/m9.figshare.16706443.v1
title: Sequence Assembly and Base composition

description: The complete mitochondrial genome of Eriocampa ovata Linne, 1760
DOI: 10.6084/m9.figshare.16706443
title: Sequence Assembly and Base composition

description: The complete mitochondrial genome of Eriocampa ovata Linne, 1760
DOI: 10.6084/m9.figshare.16706221
title: Tree_phylobayes

description: Phylobayes-13pcgs
DOI: 10.6084/m9.figshare.16706221.v1
title: Tree_phylobayes

description: Phylobayes-13pcgs
DOI: 10.6084/m9.figshare.16708009
title: Supplementary Material for: Screening, Management, and Acceptance of Patients with Aorto-Iliac Vascular Disease for Kidney Transplantation: A Survey among 161 Transplant Surgeons

description: <b><i>Introduction:</i></b> Aorto-iliac vascular disease (AVD) is frequently found during the workup for kidney transplantation. However, recommendations on screening and management are lacking. We aimed to assess differences in screening, management, and acceptance of these patients for transplantation by performing a survey among transplant surgeons. Second, we aimed to identify center- and surgeon-related factors associated with decline or acceptance of kidney transplant candidates with AVD. <b><i>Methods:</i></b> A survey was sent to transplant surgeons and urologists. The survey contained general questions (part I) and 2 patient-based cases (part II) with Trans-Atlantic Inter-Society Consensus (TASC) D and B AVD supported with videos of their CT scans. <b><i>Results:</i></b> One hundred ninety-one (20.3%) participants responded; 171 were currently involved in kidney transplantation: 161 (94.2%) completed part I and 145 (84.8%) part II. Screening for AVD was often (38.5%) restricted to high-risk patients. The majority of respondents (67.7%) rated “technical problems” as the most important concern in case of AVD, followed by “increased mortality risk because of cardiovascular comorbidity” (29.8%). Pretransplant vascular interventions to facilitate transplantation were infrequently performed (71.4% mentioned &lt;10 per year). Ninety (64.3%) respondents answered that an open vascular procedure should preferably be performed prior to kidney transplantation while 42 (30.0%) respondents preferred a simultaneous open vascular procedure. The decline rate was higher in the TASC D case compared to the TASC B case (26.9% and 9.7%, respectively). Respondents from centers with expertise in pretransplant vascular interventions were more likely to accept both patients with TASC D and B for transplantation. <b><i>Conclusion:</i></b> There is no uniformity in the screening, management, and acceptance of patients with AVD for transplantation. If a center declines a patient with AVD because of technical concerns, the patient should be referred for a second opinion to a tertiary center with expertise in pretransplant vascular interventions. Multidisciplinary meetings including a vascular surgeon and a cardiologist could help optimize these patients for transplantation.
DOI: 10.6084/m9.figshare.16707646
title: Saturation

description: PCGs saturation
DOI: 10.6084/m9.figshare.16707646.v1
title: Saturation

description: PCGs saturation
DOI: 10.6084/m9.figshare.16707328
title: Bankit

description: Sqn<br>Biosample tableSRA table
DOI: 10.5281/zenodo.5336309
title: Supplementary material for "High turn-over rates at the upper range limit and elevational source-sink dynamics in a widespread songbird"

description: <strong>Abstract</strong> The formation of an upper distributional range limit for species breeding along mountain slopes is often based on environmental gradients resulting in changing demographic rates towards high elevations. However, we still lack an empirical understanding of how the interplay of demographic parameters forms the upper range limit in highly mobile species. Here, we study apparent survival and within-study area dispersal over a 700 m elevational gradient in barn swallows (<em>Hirundo rustica</em>) by using 15 years of capture-mark-recapture data. Annual apparent survival of adult breeding birds decreased while breeding dispersal probability of adult females, but not males increased towards the upper range limit. Individuals at high elevations dispersed to farms situated at elevations lower than would be expected by random dispersal. These results suggest higher turn-over rates of breeding individuals at high elevations, an elevational increase in immigration and thus, within-population source-sink dynamics between low and high elevations. The formation of the upper range limit therefore is based on preference for low-elevation breeding sites and immigration to high elevations. Thus, shifts of the upper range limit are not only affected by changes in the quality of high-elevation habitats but also by factors affecting the number of immigrants produced at low elevations.
DOI: 10.5281/zenodo.5336308
title: Supplementary material for "High turn-over rates at the upper range limit and elevational source-sink dynamics in a widespread songbird"

description: <strong>Abstract</strong> The formation of an upper distributional range limit for species breeding along mountain slopes is often based on environmental gradients resulting in changing demographic rates towards high elevations. However, we still lack an empirical understanding of how the interplay of demographic parameters forms the upper range limit in highly mobile species. Here, we study apparent survival and within-study area dispersal over a 700 m elevational gradient in barn swallows (<em>Hirundo rustica</em>) by using 15 years of capture-mark-recapture data. Annual apparent survival of adult breeding birds decreased while breeding dispersal probability of adult females, but not males increased towards the upper range limit. Individuals at high elevations dispersed to farms situated at elevations lower than would be expected by random dispersal. These results suggest higher turn-over rates of breeding individuals at high elevations, an elevational increase in immigration and thus, within-population source-sink dynamics between low and high elevations. The formation of the upper range limit therefore is based on preference for low-elevation breeding sites and immigration to high elevations. Thus, shifts of the upper range limit are not only affected by changes in the quality of high-elevation habitats but also by factors affecting the number of immigrants produced at low elevations.