cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/y9pfcs6ptx
title: Sensory Modality Influence on Human Reinforcement Learning: Different Response Time but Consistent Performance - Data and Stimuli

description: This online study sought to investigate human learning behavior across the visual, auditory and haptic sensory modalities in a probabilistic selection task on computers and mobile devices. We examined reaction time, as an indicator for confidence, learning speed, and task accuracy. The haptic based probabilistic selection task showed the fastest reaction time, reinforcing the notion of heightened perceptual confidence in haptics. Conversely, visual stimuli processing exhibited the slowest reaction time and auditory based responses occupied an intermediate position. Despite the differences in reaction time across the senses, all modalities showed a striking consistency in both learning speed and task accuracy. The experiment was conducted using the online platform Gorilla. Experimental data acquired during the study is included in this dataset, and organised into the first block of training phase, all blocks of training phase, and evaluation phase. Auditory and visual stimuli are included in this data set, whilst haptic stimuli are listed as javascript code in the paper. For each sensory modality, 8 different sensory stimuli are created. Two stimuli are used only in the practice phase, and six are used for training and evaluation phases (details are described in the paper).
DOI: 10.6084/m9.figshare.12740663.v2
title: Litter diversity and decomposition rate data

description: Litter diversity and decomposition rate data<br>
DOI: 10.6084/m9.figshare.25910716.v1
title: genome assembly of "Reciproca conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae

description: The 0500_chr.fa.gz and 0500_3.1.1.gff.gz is the assembly and annotation of Crucihimalaya wallichiiThe1800_genome.fa.gz and 1800_4.1.2.gff.gz is the assembly and annotation of Crucihimalaya himalaicaThe Ech_Z62.fa.gz and ECHE_2.2.1.gff.gz is the assembly and annotation of Erysimum cheiranthoidesThe EryZ25_hap1.fasta.gz and ENEV_2.1.1.gff.gz is the assembly and annotation of Erysimum nevadense<br>
DOI: 10.6084/m9.figshare.28255808.v2
title: Streptococcus pyogenes wgMLST scheme.

description: Backup of BioNumerics Streptococcus pyogenes wgMLST scheme.
DOI: 10.6084/m9.figshare.3543797.v1
title: Appendix D. Results of SIMPER analyses identifying the five taxa contributing most to the dissimilarity between nutrient-poor and nutrient-rich lakes and indicating the relative changes in the abundance of each taxon in lakes of differing trophic status.

description: Results of SIMPER analyses identifying the five taxa contributing most to the dissimilarity between nutrient-poor and nutrient-rich lakes and indicating the relative changes in the abundance of each taxon in lakes of differing trophic status.
DOI: 10.6084/m9.figshare.5477749.v1
title: Single-gene alignments

description: Alignments used for single-gene tree inference.
DOI: 10.17632/3xdbn3y89j
title: Plumbago zeylanica (Chitrak) leaf dataset

description: Our dataset comprises images of Plumbago Zeylanica leaves, categorized as Healthy, Unhealthy, and Dried. These high-resolution images are useful for plant health research, machine learning models, and agricultural applications. Metadata includes date, location, and health class. Ethically sourced, this dataset aids in understanding leaf health in Plumbago Zeylanica and is available for academic use with proper citation.
DOI: 10.17632/xmbx4cg448
title: Sustained deep Pacific carbon storage after the Mid-Pleistocene Transition linked to enhanced Southern Ocean stratification

description: Deep-water Δ[CO32−] based on the SNW of planktonic foraminifera T. sacculifer and N. dutertrei for Site U1490 from the western tropical Pacific since 1.5 Ma.
DOI: 10.6084/m9.figshare.25379827.v1
title: Data from "Ant queens cannibalise infected brood to contain disease spread and recycle nutrients"

description: Data arising from "Ant queens cannibalise infected brood to contain disease spread and recycle nutrients". Experiment were performed finding that solitarily founding ant queens cannibalise all sick larvae in their nests before they become contagious, showing clearly that filial cannibalism both (i) contains an otherwise lethal infection without any long-term consequences on queen survival and (ii) enables the reinvestment of recouped energy into additional egg production. See published manuscript for full details.Data sets<i>larval_cannibalism</i> – number of larvae cannibalised by queens; description of data included in file.<i>larval_cannibalism_rates</i> – number of larvae cannibalised by queens over time; description of data included in file.<i>longterm_survival</i><i> _and_final_colony_size</i> – longterm survival and colony sizes of queens post-cannibalism; description of data included in file.<i>queen_survival</i> – survival of queens presented with infectious larvae; description of data included in file.<i>eggs</i> - number of eggs laid by cannibal and non-cannibal queens;description of data included in file.R codeAll R analysis code and output provided for each analysis performed (on above data); every file is fully annotated.
DOI: 10.6084/m9.figshare.11421885.v1
title: V Jornadas Prevención y Diagnóstico Precoz de Cáncer de Cavidad Oral y Orofaringe y Primer Encuentro de la mención en Patología Oral

description: Certificados de Asistencia a las V Jornadas Prevención y Diagnóstico Precoz de Cáncer de Cavidad Oral y Orofaringe y Primer Encuentro de la mención en Patología Oral, organizadas por la Unidad de Patología y Medicina Oral de la Universidad de Talca, realizadas en el Auditorio del Colegio de Cirujano Dentistas Maule, los días 18 y 19 de noviembre de 2019, con una duración de 16 horas cronológicas.
DOI: 10.6084/m9.figshare.21308949.v1
title: Finaldatabase_DHSIPTpSPAnalysis.sav

description: Data were extracted for analysis based on variables that were theoretically and empirically linked to the uptake of ≥3 doses of IPTp-SP as follow: (a) the dependent variable was the number of women who had received less than three doses of IPTp-SP (Poor uptake of ≥3 doses of IPTp-SP) ; (b) Independent variables comprised woman’s age, stay in the place of residence, woman’s highest educational level, religion, literacy, wealth, health insurance coverage, occupational status, matrimonial status, partner’s highest level of education, region, area of residence, area’s malaria prevalence, wanted pregnancy, parity, history of a terminated pregnancy, ANC highest attendant, number of ANC visits. Variables regarding pregnancy and prenatal care were relative to the most recent live birth. Consult data labels. <br> Complemetary information regarding variables coding can be found here:http://dhsprogram.com/publications/publication-dhsg4-dhs-questionnaires-and-manuals.cfm <br> Data was extracted and processed from the following source: https://dhsprogram.com/Data
DOI: 10.6084/m9.figshare.22630915.v1
title: Dataset Amber Necklace in Facebook English.xlsx

description: These data were collected using the CrowdTangle platform and pertain to English-language Facebook posts about amber necklaces from August 2016 to August 2021. The data were provided by Meta to the researchers and anonymized prior to being made available in this repository.
DOI: 10.6084/m9.figshare.28938050.v1
title: Annotation results on chromosome 1 of R. pubera

description: Annotation results on chromosome 1 of R. pubera
DOI: 10.6084/m9.figshare.5128501.v1
title: Supplementary Material for: Cerebral Oxygenation, Superior Vena Cava Flow, Severe Intraventricular Hemorrhage and Mortality in 60 Very Low Birth Weight Infants

description: <b><i>Background:</i></b> Brain vulnerability in the critically ill preterm newborn may be related to the burden of cerebral hypoxygenation and hypoperfusion during the immediate postnatal period. <b><i>Objective:</i></b> We determined the association between adverse outcomes [death or high grade intraventricular hemorrhage (IVH)] and continuous cerebral tissue oxygen saturation (rSO<sub>2</sub>), superior vena cava flow (SVCf) and cerebral fractional oxygen extraction (CFOE) in very low birth weight (VLBW) infants during the first 48 h of life. <b><i>Methods:</i></b> We studied a prospective cohort of 60 VLBW infants admitted to our neonatal intensive care unit within the first 6 h of life between March 2010 and June 2012. rSO<sub>2</sub> (expressed as a number of summary measures) was continuously monitored with near-infrared spectroscopy (INVOS 5100 Somanetic) during the first 48 h of life, SCVf was measured at 4-6, 12, 24 and 48 h after birth, and CFOE was calculated. <b><i>Results:</i></b> The mean gestational age was 27.9 (SD 2.39); 8 infants died (13.3%) and 7 developed IVH grade III-IV: 1 in the alive group and 6 in the deceased group (p &lt; 0.001). The odds ratio for death was 1.08 (95% CI: 1.015-1.15, p = 0.016) for each 10 periods of rSO<sub>2</sub> values &lt;40% in the first 48 h, and 4.2 (95% CI: 1.27-14.05, p = 0.019) for SVCf values &lt;40 ml/kg/min. Among alive babies, mean CFOE decreased at 24, 36 and 48 h; among deceased babies it did not (p &lt; 0.001). In the multivariate analyses, these results retained significance. <b><i>Conclusions:</i></b> Both rSO<sub>2</sub> ≤40% and SVCf &lt;40 ml/kg/min independently increase the risk of death. The trend in CFOE supports the ischemic-hypoperfusion hypothesis as a mechanism for cerebral damage.
DOI: 10.6084/m9.figshare.763246.v4
title: Data, R code and questionnaires for "Item-related determinants of cognate guessing in multilinguals"

description: These are the supplementary materials for Jan Vanhove & Raphael Berthele, <strong><em>Item-related determinants of cognate guessing in multilinguals</em></strong> in <em>Crosslinguistic influence and crosslinguistic interaction in multilingual language learning</em> (G. De Angelis, U. Jessner & M. Kresić, Eds.). The supplementary materials include the <strong>data</strong> of two studies on cognate guessing, <strong>R code</strong> for reproducing the analyses reported in our paper, and the list of <strong>stimuli<em></em></strong><em> </em>used. We welcome your feedback, but we do not provide technical support.
DOI: 10.17632/4vbj3xfshx
title: Data from “Skewness in body fat distribution pattern links to specific cardiometabolic disease risk profiles”

description: Supplemental material to Linge J, Cariou B, Neeland IJ, Petersson M, Rodriguez A, Dahlqvist Leinhard O. Skewness in body fat distribution pattern links to specific cardiometabolic disease risk profiles. J Clin Endocrinol Metab. 2023 Oct 5:dgad570. doi: 10.1210/clinem/dgad570. Epub ahead of print. PMID: 37795945.
DOI: 10.17632/8fgnf9v5f5
title: Gas sensor array temperature modulation

description: A chemical detection platform composed of 14 temperature-modulated metal oxide semiconductor (MOX) gas sensors was continuously exposed during 3 weeks to dynamic mixtures of carbon monoxide (CO) and humid synthetic air in a gas chamber. The utilized sensors are commercially available by Figaro Engineering (7 units of TGS 3870-A04) and FIS (7 units of SB-500-12). The heater voltage of the sensors is modulated in the range 0.2-0.9 V in cycles of 20 and 25 s, following manufacturer recommendations. The acquired time series of the sensors and the measured values of CO concentration, humidity and temperature inside the gas chamber are provided. Each experiment consists on 100 measurements: 10 experimental concentrations uniformly distributed in the range 0-20 ppm and 10 replicates per concentration. Each replicate has a relative humidity randomly chosen from a uniform distribution between 15% and 75% r.h. A single experiment lasts 25 hours (100 samples x 15 minutes/sample) and was replicated on 13 working days spanning a natural period of 17 days. ##Attribute Information## The dataset is presented in 13 text files, where each file corresponds to a different measurement day. The filenames indicate the timestamp (yyyymmdd_HHMMSS) of the start of the measurements. Each file includes the acquired time series, presented in 20 columns: Time (s), CO concentration (ppm), Humidity (%r.h.), Temperature (ºC), Flow rate (mL/min), Heater voltage (V), and the resistance of the 14 gas sensors: R1 (MOhm),R2 (MOhm),R3 (MOhm),R4 (MOhm),R5 (MOhm),R6 (MOhm),R7 (MOhm),R8 (MOhm),R9 (MOhm),R10 (MOhm),R11 (MOhm),R12 (MOhm),R13 (MOhm),R14 (MOhm) Resistance values R1-R7 correspond to FIGARO TGS 3870 A-04 sensors, whereas R8-R14 correspond to FIS SB-500-12 units. ##Relevant Papers## The description of the experimental setup and chemical detection platform can be found in [1-2]. The dataset has been used also in [3]. [1] Burgués, Javier, Juan Manuel Jiménez-Soto, and Santiago Marco. "Estimation of the limit of detection in semiconductor gas sensors through linearized calibration models." Analytica chimica acta 1013 (2018): 13-25. [2] Burgués, Javier, and Santiago Marco. "Multivariate estimation of the limit of detection by orthogonal partial least squares in temperature-modulated MOX sensors." Analytica chimica acta 1019 (2018): 49-64. [3] Fernandez, Luis, Jia Yan, Jordi Fonollosa, Javier Burgués, Agustin Gutierrez, and Santiago Marco. "A practical method to estimate the resolving power of a chemical sensor array: application to feature selection." Frontiers in chemistry 6 (2018). ##Citation Request## Citing references [1] and [2] is requested if you use the dataset. ##Donors of the Dataset## - Javier Burgués (jburgues '@'ibecbarcelona.eu, jburgues8 '@'gmail.com) - Santiago Marco (smarco '@'ibecbarcelona.eu)
DOI: 10.6084/m9.figshare.1084364.v1
title: Keywords: Symptoms

description: 15,135 keyphrases crawled from wrongdiagnosis.com describing health symptoms
DOI: 10.6084/m9.figshare.14812068.v1
title: Personality Moderation between Online Use and Study Abroad Difficulties

description: This is a dataset containing the big five personality, online use motives, and study abroad difficulties of students in Taiwan. Data also included Z scores of the items.
DOI: 10.6084/m9.figshare.27054778.v1
title: <b>Urban Road Networks in Spatial Representation: Spatial Geometric Dataset</b>

description: This dataset comprises simplified URN data in spatial representation from 35 selected cities. The data record encompasses the road network and the geometric details of crossings, stored in the “Spatial Geometric Dataset” in GeoJSON format. These datasets are readily applicable for spatial analysis in GIS software such as QGIS or ArcGIS.<b>Spatial Geometric Dataset.</b> Include link and node geometry data of 35 cities.1. RoadSegments (GeoJSON format):Link_id: A self-generated unique identifier for each road segment, utilized in the construction of customized graphs.Length: The length of the road segments.Intersected_node_set: Represents the node_id of the crossings intersected by this road segment, used in the construction of a bipartite graph.Interested_link_set: Represents the node_id of the crossings intersected by this road segment, used in the construction of a dual graph.2. Junctions (GeoJSON format):Node_id: A self-generated unique identifier for each intersection.Interested_link_set: Represents the link_id of road segments intersecting at this crossing.
DOI: 10.6084/m9.figshare.28582598.v1
title: Supplementary Material for: MicroRNA signatures in umbilical cord blood of neonates exposed to maternal SARS-CoV-2 infection during pregnancy

description: Introduction: Pregnant women are particularly susceptible to SARS-CoV-2 infection, which can provoke placental inflammation, potentially causing malperfusion and adverse pregnancy outcomes. The fetal immune system may respond to maternal infection, even without direct viral transmission. However, the molecular mechanisms driving these responses are not well understood. This study aims to examine changes in microRNA (miRNA) expression in umbilical cord blood from neonates of mothers infected with SARS-CoV-2 during pregnancy.
Methods: We conducted a retrospective analysis of prospectively enrolled subjects at Innsbruck University Hospital, Austria. Umbilical cord blood was collected from 58 neonates of mothers infected with SARS-CoV-2 during pregnancy (either antepartum or peripartum) born in 2020-2023 and compared with 41 healthy controls born in 2017-2018. Total RNA was extracted, followed by miRNA next-generation sequencing and differential gene expression analysis. Ingenuity Pathway Analysis (IPA) was used to explore potential miRNA-target interactions.
Results: Differential gene expression analysis identified 14 upregulated and 36 downregulated miRNAs in the cord blood of neonates from SARS-CoV-2-infected mothers compared to controls. IPA revealed enrichment in inflammatory pathways, particularly involving cytokines such as interleukin (IL)-6 and IL-10. No significant differences in miRNA expression were observed between neonates exposed antepartum versus peripartum.
Discussion/Conclusion: Maternal SARS-CoV-2 infection during pregnancy is linked to altered miRNA expression in neonates' umbilical cord blood, potentially influencing inflammatory pathways. These findings shed light on the molecular mechanisms of fetal responses to maternal SARS-CoV-2 infection.
DOI: 10.6084/m9.figshare.28840841.v1
title: Surface ocean ribosomal protein EcoPhylo interactive interfaces for Schechter et al. (2025) brief communication

description: The anvi'o contigs-db and profile-db files in this folder represent the EcoPhylo interactive interfaces for all datasets run in Schechter et al. (2025) surface ocean brief communication. This includes:Surface ocean (rpL14, rpS8, and rpS11)Learn more about this dataset and the study here:https://merenlab.org/data/ecophylo-ribosomal-proteins
DOI: 10.6084/m9.figshare.29109629.v1
title: Interview Mida.docx

description: In-depth interview transcription
DOI: 10.6084/m9.figshare.4977494.v1
title: Supplementary Material for: Overexpression of Toll-Like Receptors 2, 3, 4, and 8 Is Correlated to the Vascular Atherosclerotic Process in the Hyperlipidemic Rabbit Model: The Effect of Statin Treatment

description: <b><i>Background:</i></b> Atherosclerosis is the major cause of cardiovascular disease; hypercholesterolemia is a major risk factor. We hypothesized that specific TLR members (TLR2, TLR3, TLR4, TLR8) may play a role in atherosclerosis progression and its accompanying inflammatory response. We determined the association of atherosclerotic lesions and TLR mRNA expression in different aortic sites. We also assessed the effects of fluvastatin (Flu) treatment on TLR expression and plaque characteristics. <b><i>Methods:</i></b> Male rabbits, fed with an atherogenic diet for a duration of 3 months, were screened for advanced atherosclerotic lesions in the aorta. Additional animals received normal diet or normal diet plus Flu for 1 additional month. TLR mRNA expression in various thoracic and abdominal aortic segments was assessed, together with atherosclerotic changes. <b><i>Results:</i></b> After high lipid diet, the atherosclerotic burden increased more in the abdominal than in the thoracic aorta; TLR2, 3, 4, and 8 also increased significantly. Flu decreased atherosclerotic plaque, calcium deposition, lipid cores, intraplaque hemorrhage, erythrocyte membranes, endothelial cells, and macrophage infiltration, while increasing smooth muscle cells in plaques of both aortic segments; it also lowered TLR2, 3, 4, and 8 expression in all aortic segments to a stronger degree than resumption of normal diet. There was a strong association between blood and tissue parameters during experimental period and finally a strong correlation found between these parameters with mRNA of TLR2, 3, 4, and 8 in various stages. <b><i>Conclusion:</i></b> For the first time TLR2, 3, 4, and 8 mRNA expression is prospectively explored after hypercholesterolemic diet in the rabbit model. TLR2, 3, 4, and 8 mRNA expression is strongly upregulated and correlates with the progression of atherosclerosis in the aorta. Flu significantly inhibited this progress and reduced inflammation via TLR downregulation which was strongly associated with regression of plaque morphology and atherosclerosis promoting factors.
DOI: 10.17632/2v4m39dt3n
title: qvasp: A flexible toolkit for VASP users in materials simulations

description: We have developed a flexible toolkit, named qvasp (quickly use vienna ab-initio simulation package), to assist users to prepare input files and process output files for Vienna Ab-initio Simulation Package (VASP) during materials simulations. Here, we systematically introduced its design architecture and techniques, as well as how to use qvasp to save time and energy during the materials calculations. This program offers a user-friendly Linux-based command-line interface and aims to help users perform various materials simulations through VASP on high performance computing platform, such as structure optimization, single point energy, work function, electronic structure simulations, mechanical and optical property calculations. In particular, this toolkit provides the basic functions to roll up nanotube from nanosheet and cleave surface from bulk, it also provides an interface for users to customize their own workbags (such as constructing heterojunction structure). All features are designed user-friendly, elegantly and efficiently. We believe this toolkit will be helpful for the users in the field of computational materials science.
DOI: 10.17632/rjfwy89sk8
title: Data for Gray & Emmanouil, 2019: "Individual Alpha Frequency Increases During a Task but is Unchanged by Alpha-band Flicker"

description: EEG and behavioral data associated with Gray & Emmanouil, 2019, published in Psychophysiology. Open the readme.txt file for details on the different measures included in this dataset and how they are organized.
DOI: 10.17632/vn9xs85wht
title: MORATE: a program for direct dynamics calculations of chemical reaction rates by semiempirical molecular orbital theory

description: Abstract We present a computer program, MORATE (Molecular Orbital RATE calculations), for direct dynamics calculations of unimolecular and bimolecular rate constants of gas-phase chemical reactions involving atoms, diatoms, or polyatomic species. The potential energies, gradients, and higher derivatives of the potential are calculated whenever needed by semiempirical molecular orbital theory without the intermediary of a global or semiglobal fit. The dynamical methods used are conventional or variatio... Title of program: MORATE version 4.5/P4.5-M5.03 Catalogue Id: ACLM_v1_0 Nature of problem The program calculates chemical reaction rate coefficients for unimolecular or bimolecular gas-phase reactions. Rate constants can be computed for canonical or microcanonical ensembles or for specific vibrational states of selected modes with translational, rotational, and other vibrational modes in thermal equilibrium. Versions of this program held in the CPC repository in Mendeley Data ACLM_v1_0; MORATE version 4.5/P4.5-M5.03; 10.1016/0010-4655(93)90172-9 ACLM_v2_0; MORATE, version 6.5/P6.5-M5.05mn; 10.1016/0010-4655(95)00038-H This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.6084/m9.figshare.22591654.v1
title: RNA-seq raw data.csv

description: RNA-seq analysis was conducted on rat parathyroid tissues stimulated with or without high sodium.
DOI: 10.6084/m9.figshare.23706033.v2
title: UNC Paired 3T-7T Dataset

description: UNC Paired 3T-7T MRI Dataset
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.v2 version history: participants.tsv has been added to the record.
DOI: 10.6084/m9.figshare.25233340.v1
title: All_meQTLs.tsv.gz

description: <b>Genome-wide analysis of DNA methylation mediated genetic effect unravels a </b><b><i>KCNK3</i></b><b>-prominent causal cascade on hypertension</b>