cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive139869.20191129.4.1
title: Vibrio cholerae Pacini 1854

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139870.20191129.4.1
title: Thiomonas sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139871.20191129.4.1
title: Thiomonas sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139872.20191129.4.1
title: Thiomonas sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139873.20191129.4.1
title: Flectobacillus speluncae Denner et al.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139874.20191129.4.1
title: Pseudoalteromonas sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139875.20191129.4.1
title: Pseudoalteromonas sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139876.20191129.4.1
title: Pseudoalteromonas sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139877.20191129.4.1
title: Pseudoalteromonas sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139878.20191129.4.1
title: Pseudoalteromonas sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139879.20191129.4.1
title: Ruegeria sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139880.20191129.4.1
title: Aminobacter ciceronei McDonald et al. 2005

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139881.20191129.4.1
title: Inquilinus limosus Coenye et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139882.20191129.4.1
title: Angulomicrobium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139883.20191129.4.1
title: Caldibacillus debilis (Banat et al. 2004) Coorevits et al. 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139884.20191129.4.1
title: Mycobacterium intracellulare subsp. chimaera (Tortoli et al. 2004) Nouioui et al. 2018

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139885.20191129.4.1
title: Marinobacter australis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139886.20191129.4.1
title: Viridibacillus arvi (Heyrman et al. 2005) Albert et al. 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139887.20191129.4.1
title: Hydrogenovibrio thermophilus (Takai et al. 2004) Boden et al. 2017

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139888.20191129.4.1
title: Lentibacillus juripiscarius Namwong et al. 2005

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139889.20191129.4.1
title: Exiguobacterium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139890.20191129.4.1
title: Exiguobacterium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139891.20191129.4.1
title: Curtobacterium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139892.20191129.4.1
title: Marinococcus sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139893.20191129.4.1
title: Idiomarina sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139894.20191129.4.1
title: Idiomarina sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139895.20191129.4.1
title: Virgibacillus sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139896.20191129.4.1
title: Virgibacillus sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139897.20191129.4.1
title: Virgibacillus sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139898.20191129.4.1
title: Virgibacillus sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139899.20191129.4.1
title: Natronorubrum thiooxidans

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139900.20191129.4.1
title: Anoxybacillus sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive139901.20191129.4.1
title: Colwellia sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5517/ccdc.csd.cc2dd5pp
title: CCDC 2216242: Experimental Crystal Structure Determination

description: Related Article: Ruijie Mi, Zhiying Ding, Songjie Yu, Robert H. Crabtree, Xingwei Li|2023|J.Am.Chem.Soc.|145|8150|doi:10.1021/jacs.3c01162
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dd5tt
title: CCDC 2216246: Experimental Crystal Structure Determination

description: Related Article: Ruijie Mi, Zhiying Ding, Songjie Yu, Robert H. Crabtree, Xingwei Li|2023|J.Am.Chem.Soc.|145|8150|doi:10.1021/jacs.3c01162
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dkz98
title: CCDC 2221810: Experimental Crystal Structure Determination

description: Related Article: Yuqi Zhang, Ping Lan, Martin G. Banwell|2023|Eur.J.Org.Chem.|26|e202300010|doi:10.1002/ejoc.202300010
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dkzb9
title: CCDC 2221811: Experimental Crystal Structure Determination

description: Related Article: Yuqi Zhang, Ping Lan, Martin G. Banwell|2023|Eur.J.Org.Chem.|26|e202300010|doi:10.1002/ejoc.202300010
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7860714
title: Scenarios Nigeria SAND files

description: Models (Data sets) built during the EMP-A 2023 training on energy modelling using OSeMOSYS & FLEXTOOL with focus on Nigeria. The models translate the various emission reduction policies of Nigeria to data sets that can be analysed.
DOI: 10.5281/zenodo.7860713
title: Scenarios Nigeria SAND files

description: Models (Data sets) built during the EMP-A 2023 training on energy modelling using OSeMOSYS & FLEXTOOL with focus on Nigeria. The models translate the various emission reduction policies of Nigeria to data sets that can be analysed.
DOI: 10.6084/m9.figshare.22682104.v1
title: cultured

description: meth data
DOI: 10.5281/zenodo.7860720
title: Test data for GToTree

description: Test data for GToTree (https://github.com/AstrobioMike/GToTree/wiki)
DOI: 10.5281/zenodo.7860719
title: Test data for GToTree

description: Test data for GToTree (https://github.com/AstrobioMike/GToTree/wiki)
DOI: 10.48577/jpl.hswchh
title: A framework for estimating global river discharge from the Surface Water and Ocean Topography satellite mission

description: The forthcoming Surface Water and Ocean Topography (SWOT) mission will vastly expand measurements of global rivers, providing critical new datasets for both gaged and ungaged basins. SWOT discharge products will provide discharge for all river reaches wider than 100 m, but at lower accuracy and temporal resolution than what is possible in situ. In this paper, we describe how SWOT discharge produced and archived by the US and French space agencies will be computed from measurements of river water surface elevation, width, and slope and ancillary data, along with expected discharge accuracy. We present here for the first time a complete estimate of SWOT discharge uncertainty budget, with separate terms for random (standard error) and systematic (bias) uncertainty components in river discharge timeseries. We expect that discharge uncertainty will be less than 30% for two thirds of global reaches, and will be dominated by bias. Separate river discharge estimates will combine both SWOT and in situ data; these “gage constrained” discharge estimates can be expected to have lower systematic uncertainty. Temporal variations in river discharge timeseries will be dominated by random error and are expected to be estimated to within 15% for nearly all reaches, allowing accurate inference of event flow dynamics globally, including in ungaged basins. We believe these expected errors lay the groundwork for SWOT to enable breakthroughs in global hydrologic science.
DOI: 10.48577/jpl.0lvqid
title: Lateral Force Separation of Biopolymers using an Atomic Force Microscope

description: The lateral force separation of long chain biomolecules is demonstrated using an Atomic Force Microscope (AFM). This is achieved by using an AFM tip to pull molecules away from the edge of a nanofluidic solution. By monitoring the torsion on the AFM cantilever, a characteristic force-distance signal is produced when long chain molecules separate and detach from the solvent edge. This lateral force separation using AFM (LFS-AFM) is demonstrated on egg albumin proteins and synthetic DNA strands. The detected length of the protein and nucleotide biopolymers were consistent with their calculated molecular contour length. LSF-AFM provides separation and detection of single polymer strands that has potential applications in biochemical analysis, paleontology, and life detection.
DOI: 10.48577/jpl.k0nncc
title: Dehydrated Thin Film Media to Rapidly Estimate Bacterial Burden for Planetary Protection Flight Implementation

description: Planetary Protection is the practice of safeguarding solar system bodies from terrestrial biological contamination and screening the Earth against potentially harmful extraterrestrial biological contamination. On Earth, cleanrooms and spacecraft surfaces are assayed using swabs and wipes that are then heat shocked for 15 minutes at 80 °C to select for spores. The samples are further processed using the pour-plate method and Petri plates (TSA plates), with trypticase soy agar (TSA) serving as the growth medium. This sampling and processing procedure, called the NASA Standard Assay (NSA), is used by Planetary Protection engineers around the world. Recent years have seen an increase in the incorporation of state-of-the-art technology, such as membrane filtration, into the NSA, with a push for implementing environmentally friendly technology into day-to-day activities. Dehydrated thin film media, such as Petrifilm Rapid Aerobic Count (RAC) plates, suit these goals as an alternative method to TSA plates. RAC plates show bacterial growth (and distinguish colonies from foreign particles such as bubbles) faster than TSA plates due to the incorporation of chromogenic color indicators in the media. RAC plates also possess a much smaller environmental footprint than TSA plates, and are designed to evaluate even some of the challenging-to-detect environmental organisms, including spreaders that fill over 25% of the plate area in only a few hours. With these benefits in mind the Planetary Protection Group at the NASA Jet Propulsion Laboratory took on the task of comparing RAC plates directly to TSA plates within the context of the NSA. Not only were the RAC plates able to detect surface environmental samples and in vitro spiked samples equivalent to NSA-processed TSA plates, but spreader organisms were countable on RAC plates at culture densities 10- to 100-fold greater than on TSA plates. In addition, RAC plates showed a robust, linear detection capability when challenged with membrane filter incorporation and organisms were easily acquired from RAC plates for archiving or post-processing experiments including MALDI-TOF bacterial identification. With their ease of use, small footprint, and both rapid and accurate bioburden measurements, RAC plates have the potential to overcome limitations posed by current Planetary Protection culturing protocols.
DOI: 10.48577/jpl.2t9pbw
title: Effective Surface Roughness Impact in Polarimetric GNSS-R Soil Moisture Retrievals

description: Single-pass soil moisture retrieval from a single instrument and without using much ancillary data has been one key objective of Global Navigation Satellite System – Reflectometry (GNSS-R) for the last decade. Achieving this goal will allow small satellites with GNSS-R payloads to perform independent land monitoring without the need for additional dynamic measurements. Effective surface roughness retrieval is key to soil moisture estimations. The surface roughness attenuation derived from the Kirchhoff Approximation needs to be properly modeled to estimate soil moisture using either L-band radiometers, GNSS-R, or L-band Synthetic Aperture Radar (SAR). In the present work, the effective surface roughness is modeled by retrieving the surface correlation length of the soil using soil moisture data retrieved by the Soil Moisture Active Passive (SMAP) mission, and reflectometry measurements collected by the SMAP radar receiver (SMAP-Reflectometry or SMAP-R). The effective surface roughness is retrieved for a single-polarization approach, useful for single-polarization GNSS-R instruments, and then for dual-polarization instrument approach, where the ratio between two orthogonal polarizations is evaluated with respect to the soil moisture model. Differences between different polarizations and approaches are evaluated, and the theoretical soil moisture error with varying effective surface roughness is analyzed. Our results show a 1-sigma soil moisture error 0.08 cm3/cm3 for the dual-polarization case.
DOI: 10.48577/jpl.4qjrcy
title: Calibration Strategy for Compact Polarimetric GNSS-R Instruments

description: This work presents the bases of the Polarimetric Global Navigation Satellite System – Reflectometry (GNSS-R) calibration. Polarimetric GNSS-R is being proposed by different teams as a solution to directly estimate soil moisture by analyzing polarimetric ratios without considering any further compensation. Up to date, two approaches have been proposed to estimate soil moisture, using the ratio between the right-hand and left-hand circularly polarized received signal, and using the ratio between the linear horizontal and vertical component at a set of incidence angles, known as Hybrid Compact Polarimetric (HCP) GNSS-R. In this manuscript, the necessary calibrations of a received HCP GNSS-R signal are presented for computing the Stokes parameters. A methodology to calibrate the receiver effects, scene-antenna polarimetric miss-alignment, Faraday rotation, and transmitter non-idealities is proposed. Finally, the calibration performance is evaluated using several statistical parameters and polarimetric ratio models based on two different soil moisture products. Results show a correlation coefficient increase of 4.7% with respect to the model derived from the Soil Moisture Active Passive (SMAP) soil moisture product, and a 6.5% improvement with respect to the model derived from the European Center for Medium-Range Weather Forecasts (ECMWF) Reanalysis v5 (ERA-5) soil moisture product. Furthermore, the proposed calibrations show an unbiased root-mean-square error reduction of 6.3% and 6.8% for the SMAP soil moisture model and the ERA-5 model, respectively. Due to the SMAP antenna and pointing design, SMAP-R is implicitly insensitive to most corrections. More significant corrections should be expected for general polarimetric instruments.
DOI: 10.48577/jpl.37ibig
title: Pragmatic Verification and Validation of Industrial Executable SysML Models

description: In recent years, Model-Based Systems Engineering (MBSE) practices have been applied in various industries to design, simulate and verify complex systems. The verification and validation (V&V) of such systems engineering models are crucial to develop high-quality systems. However, this is a challenging problem due to the complexity of the models and semantic differences in how different tools interpret the models, which can undermine the validity of the obtained results if they go undiscovered. To address these issues, we propose (i) a subset of the SysML language for which the practical semantic integrity of tools can be achieved and (ii) a cloud-based verification and validation framework for this subset, lifting verification to an industrial scale. We demonstrate the feasibility of our approach on an industrialscale model from the aerospace domain and summarize the lessons learned during transitioning formal verification tools to an industrial context.
DOI: 10.48577/jpl.ysff4u
title: The Evolution of Activity and Chemical Composition in Rosetta’s Comet Targets Across Multiple Apparitions: Evidence for Additional CS Parents in Comet Nuclei

description: Jupiter family comets (JFCs) are ephemeral small bodies injected into the inner solar system from the Kuiper Belt, doomed to either sublimate all their volatiles and become inert or violently shatter from the activity. We investigate two target candidates of the ESA Rosetta mission, comets 46P/Wirtanen and 67P/Churyumov-Gerasimenko, which had favorable apparitions for Earth-based observations in 20 2018-2019 and 2021, respectively. Using the Hubble Space Telescope STIS and COS instruments we characterized the H2O and the CS2 ( assumed to be the sole parent of CS) production rates, established Afρ values, and placed upper limits on the production rate of the C2 parent. We find CS2/H2O relative abundances that are consistent with previous remote measurements of 46P and 67P. However, we find that for 67P the remote derivations of CS2/H2O ratios are substantially (∼50×) higher than the values measured by the ROSINA mass spectrometer on board the Rosetta spacecraft. We provide several hypotheses to explain this discrepancy and detail future investigations to address them.
DOI: 10.48577/jpl.ez1n0r
title: Revisiting the Land-Ocean Contrasts in Deep Convective Cloud Intensity Using Global Satellite Observations

description: Tropical convection tends to be more intense over land than ocean, but why? Numerous previous studies have investigated the causes of this difference. This paper revisits this question using CloudSat data and focuses on interconnecting various environmental parameters and cloud properties, which have often been examined in a piecemeal way in the past. Our analysis shows that if convection is treated as a process by which potential energy (convective available potential energy) is converted to kinetic energy (vertical velocity), then the conversion is more efficient over land than ocean. A key factor that affects this conversion efficiency is the lifting condensation level (LCL). Higher LCLs over land give rise to broader dry boundary layer thermals that transition to wider deep convective cores. Wider cores, in turn, are better protected from the dilution by entrainment, thus leading to stronger updrafts. This study highlights the importance of the dry stage of convection.