cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/h8y-3mj-28m
title: Macropodia rostrata (Linnaeus, 1761)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k95-sg5-vj6
title: Penaeus merguiensis De Man, 1888

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/81q-xh1-rrz
title: Leptuca leptodactyla (Rathbun in Rankin, 1898)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wl8-t3k-qnc
title: Gecarcinus lateralis Guérin, 1832

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qlg-m1h-zzp
title: Calappa tuberculata (Fabricius, 1787)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d73-h82-vkk
title: Pachygrapsus marmoratus (Fabricius, 1787)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ww1-wb4-s1p
title: Carpilius convexus (Forskål, 1775)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lqt-9p0-ezb
title: Hyas araneus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zvt-9r9-a9x
title: Sicyonella maldivensis Borradaile, 1910

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4r8-ak7-88z
title: Polybius holsatus (Fabricius, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/myt-r4k-r5e
title: Eualus pusiolus (Krøyer, 1841)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1rt-p2d-wn8
title: Pisa tetraodon (Pennant, 1777)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/95s-214-qha
title: Pachygrapsus marmoratus (Fabricius, 1787)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8fj-zma-emx
title: Isocheles wurdemanni Stimpson, 1859

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fhk-avz-5db
title: Athanas nitescens (Leach, 1813)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/znr-ekp-k1c
title: Metapenaeus affinis (H. Milne Edwards, 1837)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5m8-8v8-dps
title: Sicyonella maldivensis Borradaile, 1910

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g7m-e35-vmd
title: Parasergestes vigilax (Stimpson, 1860)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/my6-j33-0g0
title: Pisidia longicornis (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9bb-xhb-b6t
title: Solenocera atlantidis Burkenroad, 1939

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d75-2mz-6sl
title: Macrobrachium equidens (Dana, 1852)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0fy-dg6-tz9
title: Cinetorhynchus hiatti (Holthuis & Hayashi, 1967)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2lc-31k-gyw
title: Palaemon concinnus Dana, 1852

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1ks-lg9-zp0
title: Palaemon carteri (Gordon, 1935)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ezj-fm2-fdz
title: Calcinus latens (J. W. Randall, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3f4-rbq-syy
title: Pisa nodipes Leach, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pyt-3j5-qks
title: Palaemon elegans Rathke, 1837

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zb5-7w9-ap7
title: Pisa nodipes Leach, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8n5-by5-51l
title: Atya scabra (Leach, 1816)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z8d-t4p-8kr
title: Stenopus hispidus (Olivier, 1811)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/knf-cg7-xbc
title: Atlantopandalus propinqvus (G. O. Sars, 1870)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n8t-0rc-1cj
title: Ebalia tumefacta (Montagu, 1808)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j6q-43c-av1
title: Processa neglecta Hayashi, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/612-g7e-x7h
title: Clibanarius erythropus (Latreille, 1818)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dt6-x1m-07t
title: Processa aequimana (Paul'son, 1875)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gha-nxz-h1r
title: Macrobrachium lar (J. C. Fabricius, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/slz-m5a-8wz
title: Callinectes ornatus Ordway, 1863

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/99c-z7x-4hz
title: Pilumnus hirtellus (Linnaeus, 1761)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bhg-70m-n1p
title: Nematopalaemon schmitti (Holthuis, 1950)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c2t-m34-54y
title: Nikoides maldivensis Borradaile, 1915

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h5b-w0t-rqq
title: Polybius depurator (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qrm-7jw-d77
title: Palaemon antennarius H. Milne-Edwards, 1837

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y7d-n54-690
title: Palaemon antennarius H. Milne-Edwards, 1837

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1qn-gg9-aar
title: Paromola cuvieri (Risso, 1816)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/46l-kdz-24j
title: Palaemon debilis Dana, 1852

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.wwrqxc
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amaranthus tricolor L.",
 "Country is Fiji",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0104196-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/k10-mxn-z3r
title: Athanas nitescens (Leach, 1813)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/da9-s5k-t2d
title: Pagurus prideaux Leach, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hn0-0sm-5zc
title: Athanas nitescens (Leach, 1813)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e42-p6d-36e
title: Alpheus rapacida De Man, 1908

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vmy-h0r-04a
title: Paratrypaea bouvieri (Nobili, 1904)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x5l-4qc-lpe
title: Porcellana platycheles (Pennant, 1777)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a6z-4xh-mez
title: Thor amboinensis (De Man, 1888)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xcn-l2k-72t
title: Alpheus gracilipes Stimpson, 1860

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v3s-67q-4ly
title: Pagurus anachoretus Risso, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vql-b1v-j8m
title: Pasiphaea sivado (Risso, 1816)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2m3-ljb-q0q
title: Macrobrachium heterochirus (Wiegmann, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gll-41z-dsh
title: Clibanarius signatus Heller, 1861

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/59f-2jg-9kp
title: Potamon ibericum (Marschall de Bieberstein, 1809)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s66-0j0-tt9
title: Callianassa Leach, 1814

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x4w-4mt-f6h
title: Varuna litterata (Fabricius, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hqf-451-ej4
title: Pagurus prideaux Leach, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vf9-6mp-0zl
title: Hippolyte inermis Leach, 1816

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nwq-ncz-d72
title: Pagurus bernhardus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l8r-vzv-gw2
title: Hippolyte varians Leach, 1814

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p1t-1m9-rkc
title: Paguristes Dana, 1851

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1fl-jc3-m56
title: Paragalene longicrura (Nardo, 1869)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x33-hxv-61r
title: Pagurus bernhardus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jan-ddt-5bh
title: Varuna litterata (Fabricius, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w84-eg1-s25
title: Potamon ibericum (Marschall de Bieberstein, 1809)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rss-p5r-4kc
title: Carcinus maenas (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tfl-9d9-ayc
title: Cancer pagurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/es7-01z-ac0
title: Clibanarius sclopetarius (J. F. W. Herbst, 1796)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7gg-74j-g1z
title: Bathynectes longipes (Risso, 1816)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vtw-1d7-76h
title: Emerita talpoida (Say, 1817)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.6ska74
title: Occurrence Download

description: A dataset containing 969 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((72.26926 23.621875, 72.192616 23.616298, 72.11787699999999 23.599706, 72.046903 23.572512, 71.981453 23.535391, 71.923147 23.489264, 71.873425 23.435278, 71.833506 23.374768, 71.804366 23.309234, 71.786708 23.240293, 71.78094900000001 23.169649, 71.78721400000001 23.099041, 71.805328 23.030206, 71.83483099999999 22.964836, 71.874982 22.904534, 71.924785 22.850778, 71.98300999999999 22.804881, 72.04822799999999 22.767968, 72.11884000000001 22.740938, 72.193122 22.724452, 72.26926 22.718911, 72.345398 22.724452, 72.41968 22.740938, 72.490292 22.767968, 72.55551 22.804881, 72.61373500000001 22.850778, 72.663538 22.904534, 72.703689 22.964836, 72.733192 23.030206, 72.751306 23.099041, 72.757571 23.169649, 72.751812 23.240293, 72.734154 23.309234, 72.70501400000001 23.374768, 72.66509499999999 23.435278, 72.61537300000001 23.489264, 72.557067 23.535391, 72.49161700000001 23.572512, 72.420643 23.599706, 72.345904 23.616298, 72.26926 23.621875))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 969 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000615-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57702/8qkjoi21
title: Birds

description: Birds dataset consists of 28752 images of birds, each described by a Fisher vector representation.
DOI: 10.13145/bacdive169952.20250331.9.3
title: Leptospira putramalaysiae Vincent et al. 2020

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive169952.20251217.10
title: Leptospira putramalaysiae Vincent et al. 2020

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/mn8cfv6x8y
title: Advanced strategies for discrete simulations with three-dimensional R-shapes in rockable framework

description: The Discrete Element Method (DEM) is widely used to simulate the mechanical behavior of granular materials across a broad range of applications and industrial domains. Particle shape is a key feature playing a crucial role for physics-fidelity of DEM simulations. However, accurately representing complex particle shapes within DEM frameworks presents significant challenges such as defining unambiguous contact normals or managing geometric singularities. Rigid particles are often modeled as convex polyhedra, which inherently suffer from ill-defined outward normal vectors at sharp edges and vertices. To represent non-convex geometries, these polyhedra must typically be combined, further increasing the computational and geometric complexity. In this work, we adopt an efficient and robust strategy to overcome these limitations by using R-shapes, defined as rounded-edge shapes, also known as sphero-polyhedra, obtained by sweeping a sphere of radius R along the edges and faces of a base polyhedral shape. This construction results in smooth surface transitions and circumvents common issues associated with traditional polygonal representations. This paper provides a detailed presentation of the implementation, structure, and advantages of R-shapes in DEM simulations. The proposed solutions are implemented in a fully open-source software package called Rockable, developed in C++, which integrates state-of-the-art numerical techniques and shared-memory parallelization for enhanced performance. Beyond the geometric modeling aspects, we also address several methodological challenges, including the treatment of contact elasticity and the numerical integration scheme. The combined contributions of this work offer a practical and efficient framework for simulating complex particle shapes in DEM with high physics fidelity and computational efficiency.
DOI: 10.57702/x79zvykq
title: COMPAS risk assessment dataset

description: The COMPAS risk assessment dataset compiled by ProPublica, containing defendants' records of prison times, demographics, criminal histories, and the COMPAS risk scores.
DOI: 10.13145/bacdive169953.20250331.9.3
title: Leptospira sanjuanensis Fernandes et al. 2022

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive169953.20251217.10
title: Leptospira sanjuanensis Fernandes et al. 2022

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive169954.20250331.9.3
title: Paracidobacterium acidisoli Zhang et al. 2022

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/mn8cfv6x8y.1
title: Advanced strategies for discrete simulations with three-dimensional R-shapes in rockable framework

description: The Discrete Element Method (DEM) is widely used to simulate the mechanical behavior of granular materials across a broad range of applications and industrial domains. Particle shape is a key feature playing a crucial role for physics-fidelity of DEM simulations. However, accurately representing complex particle shapes within DEM frameworks presents significant challenges such as defining unambiguous contact normals or managing geometric singularities. Rigid particles are often modeled as convex polyhedra, which inherently suffer from ill-defined outward normal vectors at sharp edges and vertices. To represent non-convex geometries, these polyhedra must typically be combined, further increasing the computational and geometric complexity. In this work, we adopt an efficient and robust strategy to overcome these limitations by using R-shapes, defined as rounded-edge shapes, also known as sphero-polyhedra, obtained by sweeping a sphere of radius R along the edges and faces of a base polyhedral shape. This construction results in smooth surface transitions and circumvents common issues associated with traditional polygonal representations. This paper provides a detailed presentation of the implementation, structure, and advantages of R-shapes in DEM simulations. The proposed solutions are implemented in a fully open-source software package called Rockable, developed in C++, which integrates state-of-the-art numerical techniques and shared-memory parallelization for enhanced performance. Beyond the geometric modeling aspects, we also address several methodological challenges, including the treatment of contact elasticity and the numerical integration scheme. The combined contributions of this work offer a practical and efficient framework for simulating complex particle shapes in DEM with high physics fidelity and computational efficiency.
DOI: 10.13145/bacdive169954.20251217.10
title: Paracidobacterium acidisoli Zhang et al. 2022

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive169955.20250331.9.3
title: Alloacidobacterium dinghuense Zhang et al. 2022

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/7nwjpvnp99
title: Saline-alkali soil remediation enhanced the hydroxyl radical production as well as the soluble Fe(II) content generated via the dissimilatory microbial iron reduction

description: Global change has intensified soil salinization worldwide. Various amendments have been used to mitigate this issue. Hydroxyl radicals (·OH), which can be formed by the reaction of dissimilatory microbial iron reduction (DMIR)-derived Fe(II) with H2O2, play a key role in soil geochemical processes; however, the effect of soil amendments on ·OH generation within saline-alkali soils remains poorly understood. To address this gap, we analyzed data from saline-alkali soil remediation projects in Northeast China and explored the underlying mechanisms. This study selected the commonly used chemical amendments, desulfurized gypsum and the organic amendment, Polyaspartic acid calcium (PASP-Ca) for soil experiments. Our results demonstrated that, compared with the control treatment, the ·OH content in saline-alkali soil increased by 69.71% and 194.20% after the application of desulfurization gypsum and PASP-Ca, respectively. compared with the traditional amendment desulfurization gypsum, PASP-Ca not only exhibits superior improvement effects but also significantly promotes the generation of ·OH . This increase in ·OH was strongly associated with improved soil nutrient conditions, a rise in both ferric-reducing bacteria (FeRB) abundance and DMIR-derived soluble Fe(II), and a decrease in soil pH after the application of the amendments. Our research also found that the soluble Fe(II) derived from complexed iron (Fep), which correlated positively with soil nutrients and FeRB abundance, and negatively with soil pH. The findings of this study are expected to be validated and generalized through additional experiments involving various types of saline-alkali soil amendments thereby offering new insights into the understanding of soil geochemical cycles during the remediation of saline-alkali soils.
DOI: 10.57702/xjh9s7jr
title: GeoUK 2022 Tweets Dataset

description: A dataset of geolocated tweets in 2022, filtered to keep only tweets in the UK.
DOI: 10.13145/bacdive169955.20251217.10
title: Alloacidobacterium dinghuense Zhang et al. 2022

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.57702/in901mci
title: Stateful Performative Gradient Descent

description: The dataset used in the paper is a stateful performative setting, where the data distribution reacts to the deployed model. The goal is to learn a model that both induces a favorable data distribution and performs well on the induced distribution.
DOI: 10.13145/bacdive169956.20250331.9.3
title: Acidisarcina polymorpha Belova et al. 2022

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive169956.20251217.10
title: Acidisarcina polymorpha Belova et al. 2022

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.