cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.hqzzvc
title: Occurrence Download

description: A dataset containing 449 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calamus leucosteus Jordan & Gilbert, 1885",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 449 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065181-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/10448208
title: Contrastive Language Image Pretraining by openai
DOI: 10.15468/dl.975au3
title: Occurrence Download

description: A dataset containing 366 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calamus nodosus Randall & Caldwell, 1966",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 366 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065182-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wgpyq4
title: Occurrence Download

description: A dataset containing 585 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calamus penna (Valenciennes, 1830)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 585 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065183-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gfscg
title: Occurrence Download

description: A dataset containing 359 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calamus pennatula Guichenot, 1868",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 359 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065184-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9w9yfv
title: Occurrence Download

description: A dataset containing 377 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calamus proridens Jordan & Gilbert, 1884",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 377 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065185-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wkrq8h
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Australia, New Zealand)",
 "DatasetKey is one of (New Zealand Fungal and Plant Disease Collection (PDD), National Herbarium of Victoria (MEL) AVH data)",
 "TaxonKey is Wolfina Seaver ex Eckblad, 1968"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065186-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cwun46
title: Occurrence Download

description: A dataset containing 324 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Invertebrates Collection of the Swedish Museum of Natural History, Colección del Departamento de Biología Animal (Zoología) de la Universidad de La Laguna, International Barcode of Life project (iBOL), INSDC Sequences, Australian Museum provider for OZCAM, Collection Crustacea - ZMB, Collection Crustacea SMF, Invertebrata varia (Luomus), naturgucker, NHMD Invertebrate Zoology Collection)",
 "GadmGid is ESP.14_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Isopoda",
 "Year 1000-2024"
 ]
}

 The dataset includes 324 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065187-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ea4fyc
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callanthias ruber (Rafinesque, 1810)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 154 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065188-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vudd92
title: Occurrence Download

description: A dataset containing 542 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callionymus bairdi Jordan, 1888",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 542 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065189-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14633639
title: WF80 data
DOI: 10.5281/zenodo.14633640
title: WF80 data
DOI: 10.5281/zenodo.14633642
title: SG100 data
DOI: 10.5281/zenodo.14633643
title: SG100 data
DOI: 10.5281/zenodo.14633646
title: DZ01 shallow seismic profile data
DOI: 10.5281/zenodo.14633647
title: DZ01 shallow seismic profile data
DOI: 10.15468/dl.f4r2fm
title: Occurrence Download

description: A dataset containing 17393 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callionymus lyra Linnaeus, 1758",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 17393 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065190-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxg5ez
title: Occurrence Download

description: A dataset containing 1498 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callionymus maculatus Rafinesque, 1810",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 1498 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065191-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v52x4e
title: Occurrence Download

description: A dataset containing 4579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callionymus reticulatus Valenciennes, 1837",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 4579 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065192-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzmzsq
title: Occurrence Download

description: A dataset containing 221 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callionymus risso Lesueur, 1814",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 221 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065193-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9b2gjg
title: Occurrence Download

description: A dataset containing 2797 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cantherhines macrocerus (Hollard, 1853)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 2797 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065194-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k6vbve
title: Occurrence Download

description: A dataset containing 2609 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cantherhines pullus (Ranzani, 1842)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 2609 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065195-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tfn3x2
title: Occurrence Download

description: A dataset containing 12601 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canthidermis maculata (Bloch, 1786)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 12601 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065196-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ts3k5h
title: Occurrence Download

description: A dataset containing 319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Philippines",
 "TaxonKey is Oecophylla smaragdina (Fabricius, 1775)"
 ]
}

 The dataset includes 319 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065197-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jrjzhs
title: Occurrence Download

description: A dataset containing 2302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canthidermis sufflamen (Mitchill, 1815)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 2302 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065199-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11493752
title: Orbicella faveolata coral metagenome assemblies from the ECA region of Florida, USA

description: The enclosed files include Orbicella faveolata coral metagenome assemblies collected from the Coral Ecosystem Conservation Area (ECA) in southeast Florida, USA. Metadata for the files including region of collection and associated NCBI accession numbers is included in this repository as the metadata file. Apparently healthy coral tissue cores were collected between May 28 and June 21, 2021. The DNA was extracted from the host tissue and mucus and sequenced in a paired-end 150 bp format on an Illumina NovaSeq. Trimming and quality filtering of DNA sequences proceeded, followed by host and endosymbiotic dinoflagellate DNA removal. The host-cleaned reads were assembled individually by coral sample into longer contigs using MegaHit v1.1.4. The “Assembly_Fastas” zipped file contains 45 metagenome assemblies from the individual Orbicella faveolata corals. In addition, these metagenome assemblies were annotated with eggnog-mapper v2.1.6 to generate both predicted gene regions and annotation output files. The “Predicted_Gene_Fastas” zipped file contains nucleotide fasta files of the predicted gene regions for the 45 coral metagenome assemblies. The fasta header of each gene includes the contig ID it originated from in the associated “Assembly_Fastas”. The “Predicted_Gene_Annotations” zipped file contains either .csv or .xlsx files with the eggnog-mapper-based annotations. These files contain a “query contig” that corresponds to the contig ID in the fasta header of the “Predicted_Gene_Fastas”.  

These data were processed and generated by Julie Meyer’s Lab at the University of Florida, using funding from the Florida Department of Environmental Protection.
DOI: 10.5281/zenodo.11493776
title: Orbicella faveolata and O. franksi coral metagenome assemblies from the Lower Florida Keys region of Florida, USA

description: The enclosed files include mostly Orbicella faveolata and three Orbicella franksi coral metagenome assemblies collected from the Lower Keys in Florida’s Coral Reef, USA. Metadata for the files is included in this repository. Apparently healthy coral tissue cores were collected between May 28 and June 21, 2021. The DNA was extracted from the host and associated microorganisms and sequenced in a paired-end 150 bp format on an Illumina NovaSeq. Trimming and quality filtering of DNA sequence reads proceeded, followed by host and photoendosymbiotic dinoflagellate DNA removal. The host-cleaned reads were assembled individually by coral sample into longer contigs using MegaHit v1.1.4. The “Assembly_Fastas” zipped file contains 41 metagenome assemblies from the individual Orbicella faveolata corals and 3 assemblies from the individual Orbicella franksi colonies for a total of 44 assemblies. In addition, these assemblies were annotated with eggnog-mapper v2.1.6 to generate both predicted gene regions and annotation output files. The “Predicted_Gene_Fastas” zipped file contains nucleotide fasta files of the predicted gene regions for all 44 coral metagenome assemblies. The fasta header of each gene includes the contig ID it originated from in the associated “Assembly_Fasta”. The “Predicted_Gene_Annotations” zipped file contains either .csv or .xlsx files with the eggnog-mapper-based annotations. These files contain a “query contig” that corresponds to the contig ID in the fasta header of the “Predicted_Gene_Fasta”. 

In addition to individual assemblies, a co-assembly was generated that included all 41 Orbicella faveolata coral samples. Prior to co-assembly, further removal of eukaryotic DNA proceeded by splitting the indiviudual assemblies into eukaryotic and prokaryotic content with the program EukRep v0.6.7, followed by mapping of the host-clean reads to the eukaryotic DNA to remove them. The eukaryote-clean reads from all 41 corals were input into MegaHit to generate a co-assembly. The co-assembly is included (FLK_OFAV_MG_coassembly_final.contigs.fa). Predicted genes from the co-assembly were generated with Prodigal v2.6.3 and the nucleotide fasta of the output is included in this repository (FLK_OFAV_MG_pred.fna). Like with the indiviudal assemblies, eggnog-mapper was used to generate annotations of the predicted genes from Prodigal (FLK_OFAV_MG.emapper.annotations.xlsx).  Additionally, the abundance of each predicted gene was generated using Salmon to map the eukaryote-clean reads to the predicted genes. The number of reads (counts) for each gene across each coral sample were aggregated as integers into one table and included in this repository (FLK_OFAV_MG_pred_NumReads.tsv).  




These data were processed and generated by Julie Meyer’s Lab at the University of Florida, using funding from the Florida Department of Environmental Protection.
DOI: 10.15468/dl.erxtcw
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pleurogrammus azonus Jordan & Metz, 1913",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 106 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022127-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9r3wmp
title: Occurrence Download

description: A dataset containing 1353 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callistus lunatus (Fabricius, 1775)"
 ]
}

 The dataset includes 1353 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022128-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5zz66
title: Occurrence Download

description: A dataset containing 548 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calosoma maderae (Fabricius, 1775)"
 ]
}

 The dataset includes 548 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022129-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jfuhrt
title: Occurrence Download

description: A dataset listing the 9512 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Phylogenomics and the rise of the angiosperms"
 ]
}

 The dataset's 9512 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022117-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h5wken
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pandalus borealis Krøyer, 1838",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022130-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6c4zk
title: Occurrence Download

description: A dataset containing 137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Lolium perenne L."
 ]
}

 The dataset includes 137 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022132-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8fvyfj
title: Occurrence Download

description: A dataset containing 28753 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Specimen, Living Specimen, Occurrence evidence)",
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Coordinate reprojected, Coordinate precision invalid, Coordinate uncertainty meters invalid, Coordinate precision/uncertainty mismatch, Country derived from coordinates, Continent derived from coordinates, Continent derived from country, Presumed swapped coordinate, The scientific name ID was not used in backbone matching, The taxon concept ID was not used in backbone matching, The taxon ID was not used in backbone matching, The scientific name ID was not found in the checklist, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, Depth min max swapped, Elevation min max swapped, Multimedia URI invalid, Multimedia date invalid, Occurrence status inferred from individual count, ccurrence status inferred from basis of record)",
 "TaxonKey is Aquila adalberti C.L.Brehm, 1861",
 "Year 2014-2024"
 ]
}

 The dataset includes 28753 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022131-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gwhcn7
title: Occurrence Download

description: A dataset containing 351 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plutodes costatus (Butler, 1886)"
 ]
}

 The dataset includes 351 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022133-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rz7kuq
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pandalus nipponensis Yokoya, 1933",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022134-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26270224
title: The genome sequence and annotation file of L.panicea genome

description: The genome sequence and annotation file of L.panicea genome
DOI: 10.6084/m9.figshare.26270224.v1
title: The genome sequence and annotation file of L.panicea genome

description: The genome sequence and annotation file of L.panicea genome
DOI: 10.15468/dl.y6pjba
title: Occurrence Download

description: A dataset containing 4694 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Malacosoma castrense (Linnaeus, 1758)"
 ]
}

 The dataset includes 4694 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022135-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12732522
title: From social categorization to implicit citizenship theories: Advancing the socio-cognitive foundations of state–citizen interactions

description: Data for the following article: Vogel, R., Vogel, D., Liegat, M. C., & Hensel, D. (2024). From social categorization to implicit citizenship theories: Advancing the socio‐cognitive foundations of state–citizen interactions. Public Administration Review, Article puar.13844. Advance online publication. https://doi.org/10.1111/puar.13844