cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.kr8a7w
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"5251961","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013051-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rmas3a
title: Occurrence Download

description: A dataset containing 49792 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "TaxonKey is Bromus tectorum L."
 ]
}

 The dataset includes 49792 records from 449 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013052-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rne8dh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"11174915","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013053-241024112534372/datasets/export for details.
DOI: 10.15468/dl.cy6em9
title: Occurrence Download

description: A dataset containing 7962198 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is one of (Poecile atricapillus (Linnaeus, 1766))",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 1901",
 "Year is less than or equal to 2019",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 7962198 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013046-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjfd8w
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"5188667","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013054-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ykg54
title: Occurrence Download

description: A dataset containing 9992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Erignathus barbatus (Erxleben, 1777)"
 ]
}

 The dataset includes 9992 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013056-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j4wwuu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1736497","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013058-241024112534372/datasets/export for details.
DOI: 10.15468/dl.ysbwry
title: Occurrence Download

description: A dataset containing 1804 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"TAXON_KEY","value":"1736528","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"lessThan","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"in","key":"YEAR","values":["2008","2009","2010","2011","2012","2013","2014","2015","2016","2017","2018","2019","2020","2021","2022","2023","2024"],"matchCase":false},{"type":"in","key":"BASIS_OF_RECORD","values":["LIVING_SPECIMEN","HUMAN OBSERVATION","OBSERVATION","OCCURRENCE","MACHINE_OBSERVATION"],"matchCase":false}]}

 The dataset includes 1804 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013059-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5ckf6
title: Occurrence Download

description: A dataset containing 6904 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hoplobatrachus rugulosus (Wiegmann, 1834)"
 ]
}

 The dataset includes 6904 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003395-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69hafz
title: Occurrence Download

description: A dataset containing 392219 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON(((-73.541033535794 45.5198102,-73.5432318697675 45.5295343705806,-73.549611683442 45.5383052294676,-73.5595484762043 45.545264848946,-73.572069565545 45.5497327455823,-73.5859493 45.5512721955756,-73.599829034455 45.5497327455823,-73.6123501237957 45.545264848946,-73.622286916558 45.5383052294676,-73.6286667302325 45.5295343705806,-73.630865064206 45.5198102,-73.6286667302325 45.5100843485337,-73.622286916558 45.5013090890309,-73.6123501237957 45.4943440300925,-73.599829034455 45.489871732841,-73.5859493 45.4883306019622,-73.572069565545 45.489871732841,-73.5595484762043 45.4943440300925,-73.549611683442 45.5013090890309,-73.5432318697675 45.5100843485337,-73.541033535794 45.5198102)))"
 ]
}

 The dataset includes 392219 records from 186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013039-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.by6cxt
title: Occurrence Download

description: A dataset listing the 261 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-100.15574 20.61481,-100.23269 20.67777,-100.23642 20.68082,-100.24348 20.6866,-100.25251 20.67998,-100.24591 20.63511,-100.24121 20.61304,-100.20339 20.57622,-100.15574 20.61481))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 261 records were derived from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013057-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7sb25
title: Occurrence Download

description: A dataset containing 1410137 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is one of (Riparia riparia (Linnaeus, 1758))",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 1901",
 "Year is less than or equal to 2019",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1410137 records from 1215 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013055-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wm5hwm
title: Occurrence Download

description: A dataset containing 1468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ophiuridae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1468 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002563-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qf9qb2
title: Occurrence Download

description: A dataset containing 1248 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "Country is one of (United States of America, United States Minor Outlying Islands, American Samoa, Micronesia (Federated States of), Guam, Marshall Islands, Northern Mariana Islands, Puerto Rico, Palau, Virgin Islands (U.S.))",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Nymphoides aquatica (J.F.Gmel.) Kuntze)"
 ]
}

 The dataset includes 1248 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002565-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28297424
title: Grade Approach.docx

description: <b>Assessment of cross-cultural adaptations and patient-reported outcome measures relevant to shoulder disorders in Turkish: A systematic review using the COSMIN methodology.</b>
DOI: 10.6084/m9.figshare.28297424.v1
title: Grade Approach.docx

description: <b>Assessment of cross-cultural adaptations and patient-reported outcome measures relevant to shoulder disorders in Turkish: A systematic review using the COSMIN methodology.</b>
DOI: 10.15468/dl.a2vn6h
title: Occurrence Download

description: A dataset containing 9667 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lacerta agilis Linnaeus, 1758",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 9667 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002566-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25751271
title: ZupT.align.faa

description: untrimmed alignment of ZupT domain, including sequences of bacterial symbionts of predatory protists
DOI: 10.6084/m9.figshare.25751271.v1
title: ZupT.align.faa

description: untrimmed alignment of ZupT domain, including sequences of bacterial symbionts of predatory protists
DOI: 10.5281/zenodo.14755782
title: Data archive for: Linking relative suitability to probability of occurrence in presence-only species distribution models: Implications for global change projections

description: Data associated with the paper "Linking relative suitability to probability of occurrence in presence-only species distribution models: Implications for global change projections" with the exception of GBIF data which can be found at the following link: https://doi.org/10.15468/DL.TP3BVT
DOI: 10.5281/zenodo.14755783
title: Data archive for: Linking relative suitability to probability of occurrence in presence-only species distribution models: Implications for global change projections

description: Data associated with the paper "Linking relative suitability to probability of occurrence in presence-only species distribution models: Implications for global change projections" with the exception of GBIF data which can be found at the following link: https://doi.org/10.15468/DL.TP3BVT
DOI: 10.15468/dl.dypwhe
title: Occurrence Download

description: A dataset containing 834 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "Continent is South America",
 "OccurrenceStatus is Present",
 "TaxonKey is Pilosocereus catingicola (Gürke) Byles & G.D.Rowley"
 ]
}

 The dataset includes 834 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002567-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.whrjds
title: Occurrence Download

description: A dataset containing 706 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hyperiidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 706 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002568-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jwdrx5
title: Occurrence Download

description: A dataset containing 1076 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lacerta viridis (Laurenti, 1768)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 1076 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002569-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qkh28f
title: Occurrence Download

description: A dataset containing 157 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Calliscarta Stål, 1869"
 ]
}

 The dataset includes 157 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002570-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8cryrf
title: Occurrence Download

description: A dataset containing 3624 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Tigridia Juss."
 ]
}

 The dataset includes 3624 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002571-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cdnpnh
title: Occurrence Download

description: A dataset containing 3624 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Tigridia Juss."
 ]
}

 The dataset includes 3624 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002572-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pmmyaw
title: Occurrence Download

description: A dataset containing 3624 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Tigridia Juss."
 ]
}

 The dataset includes 3624 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002573-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14756159
title: Flux Emergence Simulation with epsilon=0.2 (x and y slices)
DOI: 10.5281/zenodo.14756160
title: Flux Emergence Simulation with epsilon=0.2 (x and y slices)
DOI: 10.5281/zenodo.14525304
title: Supplementary Data for: Multi-omics decipher the molecular mechanisms driving high-lipid production in an artificially-evolved Chlamydomonas mutant

description: Enhancing lipid accumulation in microalgae is critical for commercial viability. Commonly, lipid accumulation is accompanied by growth retardation. We previously isolated an artificially evolved mutant (H5) that matches its parental strain's growth rate (CC-503) while accumulating significantly more lipids. Here, we report our results of the systems-level interrogations of the underlying perturbations that enable the H5 mutant to accumulate elevated lipid levels. Whole-genome sequencing revealed over 3,000 mutations in the H5 genome, including 45 in protein-coding sequences (e.g., phosphofructokinase, acyl-carrier protein, glycerol kinase). We found that six corresponding mutants from the Chlamydomonas Library Project had higher lipid accumulation than the control CC-5325. Key genes responsible for lipid accumulation, glycolysis, nutrient uptake, and cell proliferation (e.g., pyruvate carboxylase and carbonic anhydrase) were expressed significantly higher in H5 under nutrient-replete conditions. Metabolomics revealed H5's exceptional levels of malonate, crucial for lipid production and cell proliferation. Epigenomics showed significant hypomethylation in triacylglycerol (TAG) production-related genes and hypermethylation in cellular energy balance regulators. These multi-omic datasets help explain H5's phenotype, with accelerated glycolysis and the loss of several non-essential processes fueling lipid accumulation during exponential growth. The obtained findings can guide genetic engineering of microalgae for elevated lipid accumulation.
DOI: 10.5281/zenodo.14525793
title: Supplementary Data for: Multi-omics decipher the molecular mechanisms driving high-lipid production in an artificially-evolved Chlamydomonas mutant

description: Enhancing lipid accumulation in microalgae is critical for commercial viability. Commonly, lipid accumulation is accompanied by growth retardation. We previously isolated an artificially evolved mutant (H5) that matches its parental strain's growth rate (CC-503) while accumulating significantly more lipids. Here, we report our results of the systems-level interrogations of the underlying perturbations that enable the H5 mutant to accumulate elevated lipid levels. Whole-genome sequencing revealed over 3,000 mutations in the H5 genome, including 45 in protein-coding sequences (e.g., phosphofructokinase, acyl-carrier protein, glycerol kinase). We found that six corresponding mutants from the Chlamydomonas Library Project had higher lipid accumulation than the control CC-5325. Key genes responsible for lipid accumulation, glycolysis, nutrient uptake, and cell proliferation (e.g., pyruvate carboxylase and carbonic anhydrase) were expressed significantly higher in H5 under nutrient-replete conditions. Metabolomics revealed H5's exceptional levels of malonate, crucial for lipid production and cell proliferation. Epigenomics showed significant hypomethylation in triacylglycerol (TAG) production-related genes and hypermethylation in cellular energy balance regulators. These multi-omic datasets help explain H5's phenotype, with accelerated glycolysis and the loss of several non-essential processes fueling lipid accumulation during exponential growth. The obtained findings can guide genetic engineering of microalgae for elevated lipid accumulation.
DOI: 10.15468/dl.y7z9wy
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physaliidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 73 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002574-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g44q3n
title: Occurrence Download

description: A dataset containing 174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vipera ammodytes (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018",
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 174 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002575-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7mypuq
title: Occurrence Download

description: A dataset containing 176 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hemiprionites Spath, 1929"
 ]
}

 The dataset includes 176 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002576-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.