cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5063/f1br8qg4
title: Estimate of total Alaskan salmon abundance by region, 2000-2015

description: This dataset compiles salmon escapement data from Alaska Department of Fish and Game reports and salmon harvest data from commercial, personal use, sport fish, and subsistence sectors to generate an estimate of total salmon abundance in each of the regions defined by the State of Alaska's Salmon and People Project (SASAP). This dataset was assembled to enable a broad view of the salmon resource, whether biological (escapement) or economic/cultural (harvest), across regions. With that intent in mind, a fish is counted within a region if it escaped a fishery and was counted in a river that is contained within that region, or if it was caught in a fishery that is within the region. For commercial fisheries, each commercial fishing district was assigned to a region based on the location of the commercial fishing district relative to the bounding watersheds of the region. No effort was made to determine the region of origin for any commercially caught fish - thus for some regions, fish caught in one region may have been headed to spawn in another. This is especially true of Alaska Peninsula and Aleutian Islands commercial fishing areas, which are well known for having large amounts of Bristol Bay bound fish. Note that some regions have missing escapement data during some years. This dataset includes an R Markdown file which processes the original data and creates figures, the rendered html file generated from running the R Markdown file which includes many figures and data explanation, and several standalone versions of those figures. Data sources: Jeanette Clark and Alaska Department of Fish and Game, Division of Commercial Fisheries Alaska Department of Fish and Game, Division of Sport Fish Alaska Department of Fish and Game, Division of Subsistence. Harvest of Salmon across Commercial, Subsistence, Personal Use, and Sport Fish sectors, Alaska, 1995-2016. Knowledge Network for Biocomplexity. doi:10.5063/F1TT4P73 Andrew Munro and Eric Volk. 2018. Summary of Pacific Salmon Escapement Goals in Alaska with a Review of Escapements from 2001 to 2009. Knowledge Network for Biocomplexity. doi:10.5063/F1416VB4 Andrew Munro and Eric Volk. 2017. Summary of Pacific Salmon Escapement Goals in Alaska with a Review of Escapements from 2007 to 2015. Knowledge Network for Biocomplexity. doi:10.5063/F1GX48V4 James Savereide. 2017. Estimated annual Chinook Salmon escapement at Copper River from 1980 to 2016. Knowledge Network for Biocomplexity. doi:10.5063/F1G15Z4D.
DOI: 10.6084/m9.figshare.15167331
title: Figure 1

description: Figure 1 raw data
DOI: 10.6084/m9.figshare.15167331.v1
title: Figure 1

description: Figure 1 raw data
DOI: 10.6069/h3y8-md63
title: Global Burden of Disease Study 2020, Release 1 (GBD 2020 R1) Routine Childhood Vaccination Coverage 1980-2019

description: Estimates of vaccination coverage for 11 childhood vaccines (first-dose bacillus Calmette-Guérin [BCG], first- and third-dose diphtheria-tetanus-pertussis [DTP1, DTP3], third-dose hepatitis B [HepB3], third-dose Haemophilus influenzae type b [Hib3], first- and second-dose measles [MCV1, MCV2], third-dose pneumococcal conjugate vaccine [PCV3], third-dose polio [Pol3], first-dose rubella-containing vaccine [RCV1], and complete rotavirus [RotaC, two or three doses]) were produced for 204 countries and territories between 1980 and 2019 as part of the Global Burden of Disease Study 2020, Release 1 (GBD 2020 R1). The estimation process primarily utilized household survey microdata, household survey report data in the absence of microdata, and estimates of country-reported coverage data.

This dataset includes the following:

- CSV files for national-level estimates of vaccine coverage, by vaccine
- Code files used to generate the estimates
DOI: 10.6069/8svc-sw24
title: Global COVID-19 Routine Childhood Vaccination Disruption 2020

description: This dataset provides estimates of the impact of COVID-19 on routine childhood immunizations (DTP3 and MCV1) monthly in 2020 by country, Global Burden of Disease (GBD) super-region, and globally. Indicators include mean and 95% uncertainty intervals for the estimated relative disruption attributable to COVID-19, estimated coverage, and expected coverage in the absence of COVID-19 for all locations and estimated doses missed, expected doses missed in the absence of COVID-19, and estimated doses missed attributable to COVID-19 for global and GBD super-region locations. These estimates were produced using administrative data and reports from electronic immunization systems, with mobility data as a model input.
DOI: 10.6069/1ghx-yy50
title: United States Healthcare Spending by Race and Ethnicity 2002-2016

description: This dataset includes estimates of total health care spending in the US for 6 race/ethnicity groups by 6 types of care, sex, 19 age groups, and 7 health condition, as well as an aggregate of all health conditions, for the years 2002-2016. To produce these estimates, data on self-reported race and Hispanic ethnicity, age, sex, insurance coverage, knowledge of having key health conditions, and information about health system encounters (visits, admission, or prescriptions), diagnoses, and healthcare spending were extracted from the Medical Expenditure Panel Survey (2002-2016), the National Health Interview Survey (2002; 2016), and the Medicare Current Beneficiary Survey (2002-2012). These data were combined with healthcare spending estimates form the Disease Expenditure Project (1996-2016). Estimates are reported in inflation-adjusted 2016 US dollars.
DOI: 10.5066/f71j9879
title: Monthly densities of the snail Cerithideopsis (Cerithidea) californica at Carpinteria Salt Marsh, California USA, February 2012 to January 2014

description: Each month (except March 2012), we collected detailed data on the density, size distribution, and infection status of intertidal snails from ten fixed sites as part of a broader effort to understand food webs in California Estuaries. The study site was Carpinteria Salt Marsh Reserve, California USA, (University of California Natural Reserve System), which comprises 9 Ha tidal channels, 2 Ha salt flats, 17 Ha upland habitat, 6 Ha tidal pans, 52 Ha vegetated marsh, 2 Ha tidal flats. Each site was a fixed location in channel or flat habitat, with a diameter approximately 50m in size, centered at the site location marker used in Kuris et al. (2008). At each site/month, we collected, measured, sexed, and dissected ~58 snails. We collected and measured an additional ~42 snails for size-frequency distributions (7,793 snails total). Transects were placed randomly at flats sites. For channel sites, transects were placed randomly on the channel bank with the highest snail density. Each transect started 20 cm within the vegetated margin, and extended downslope to the deepest part of the channel or interior of the pan or to a maximum length of 10 m. For every 20 cm decrease in elevation, we established a new transect segment, or quadrat. Specifically, we systematically placed transects at intervals stratified within targeted habitat types: channels, pans, or marsh (or planar habitat that was mixed marsh and pan). At a quarter of the quadrats, we also estimated snail size-frequency distributions. Because we recorded the location of each quadrat, these data can be used to map the distribution of snails throughout this estuary.
DOI: 10.6069/7z5y-4r65
title: Low- and Middle-Income Country Primary Health Care Expenditures 2000-2017

description: This dataset includes estimates of primary health care (PHC) expenditures, PHC expenditures in ambulatory settings, and PHC expenditures disaggregated by the System of Health Accounts (SHA) health care function category in low- and middle-income countries (LMICs) from 2000 through 2017. Three data sources were used to estimate PHC expenditures: recently published health expenditure estimates for each LMIC, which were constructed using 1662 country-reported National Health Accounts (NHAs); proprietary data from IQVIA to estimate expenditure of prescribed pharmaceuticals for PHC; and household surveys and costing estimates to estimate inpatient vaginal delivery expenditures.
DOI: 10.5281/zenodo.5195315
title: Wikidata Dump

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.5281/zenodo.5195314
title: Wikidata Dump

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.5066/f71v5c2w
title: Identifying Kittlitz's Murrelet nesting habitat in North America at the landscape scale

description: The Kittlitz's Murrelet (Brachyramphus brevirostris) is a small, non-colonial seabird endemic to marine waters of Alaska and eastern Russia that may have experienced significant population decline in recent decades, in part because of low reproductive success and terrestrial threats. Although recent studies have shed new light on Kittlitz's Murrelet nesting habitat in a few discrete areas, the location and extent of other possible nesting areas throughout most of its range remains unclear. This data release consists of (1) nest locations for the Kittlitz's Murrelet (2) potential Kittlitz's Murrelet nesting habitat. These data support the following publication: Felis J.J., Kissling M.L., Kaler R.S.A., Kenney L.A., Lawonn M.J., 2016. Identifying Kittlitz's Murrelet nesting habitat in North America at the landscape scale. Journal of Fish and Wildlife Management 7(2):xx-xx; e1944-687X. doi: 10.3996/112015-JFWM-116
DOI: 10.5517/ccdc.csd.cc267zjz
title: CCDC 2033461: Experimental Crystal Structure Determination

description: Related Article: Dorothy Priyanka Dorairaj, Jebiti Haribabu, Vadivalagan Chithravel, Kailasam N. Vennila, Nattamai Bhuvanesh, Cesar Echeverria, Sodio C.N. Hsu, Ramasamy Karvembu|2021|Results in Chemistry|3|100157|doi:10.1016/j.rechem.2021.100157
DOI: 10.5517/ccdc.csd.cc240fqb
title: CCDC 1966631: Experimental Crystal Structure Determination

description: Related Article: Eda Ismailoglu, Zeynep Mert, Mert Dinc, Kerem Kaya, Baris Yucel|2021|Eur.J.Org.Chem.|2021|4107|doi:10.1002/ejoc.202100483
DOI: 10.5517/ccdc.csd.cc26h1qh
title: CCDC 2040256: Experimental Crystal Structure Determination

description: Related Article: Eda Ismailoglu, Zeynep Mert, Mert Dinc, Kerem Kaya, Baris Yucel|2021|Eur.J.Org.Chem.|2021|4107|doi:10.1002/ejoc.202100483
DOI: 10.5517/ccdc.csd.cc26h2g8
title: CCDC 2040279: Experimental Crystal Structure Determination

description: Related Article: Eda Ismailoglu, Zeynep Mert, Mert Dinc, Kerem Kaya, Baris Yucel|2021|Eur.J.Org.Chem.|2021|4107|doi:10.1002/ejoc.202100483
DOI: 10.5517/ccdc.csd.cc26pr3s
title: CCDC 2046685: Experimental Crystal Structure Determination

description: Related Article: Christina M. Legendre, Emil Damgaard-Møller, Jacob Overgaard, Dietmar Stalke|2021|Eur.J.Inorg.Chem.|2021|3108|doi:10.1002/ejic.202100465
DOI: 10.5517/ccdc.csd.cc26pr4t
title: CCDC 2046686: Experimental Crystal Structure Determination

description: Related Article: Christina M. Legendre, Emil Damgaard-Møller, Jacob Overgaard, Dietmar Stalke|2021|Eur.J.Inorg.Chem.|2021|3108|doi:10.1002/ejic.202100465
DOI: 10.15468/8hgwbj
title: A new species of earthworm in Amynthas hexathecus species group (Clitellata: Megascolecidae) from the Nam Xam National Protected Area, Laos

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hong, Yong, James, Samuel W., Inkhavilay, Khamla (2013): A new species of earthworm in Amynthas hexathecus species group (Clitellata: Megascolecidae) from the Nam Xam National Protected Area, Laos. Journal of Natural History 48 (5 - 6): 251-256, DOI: 10.1080/00222933.2013.809491, URL: http://dx.doi.org/10.1080/00222933.2013.809491
DOI: 10.6078/m7nk3c52
title: Household Zooarchaeology of Colonial Lamanai
DOI: 10.5063/7s7m5w
title: Historic air temperatures in Alaska for 1901-2015, with spatial subsetting by region

description: The purpose of this project is to extract historic average Alaskan air temperatures across different time intervals for periods of interest (e.g. spawning season, growing season, monthly averages) across different regions of Alaska. Details on the extraction can be found in the file "AirTempHistoric.ipynb" within this package. In particular, the data files in this package comprise records for regional and temporal subsets of the original dataset, with the regional divisions determined by the SASAP (State of Alaska's Salmon and People) project. These data were derived from the "Historical Monthly Temperature - 1 km CRU TS" dataset, available at http://ckan.snap.uaf.edu/dataset/historical-monthly-temperature-1-km-cru-ts. The Historical Monthly Temperature - 1 km CRU TS dataset was created by Matthew Leonawicz, Michael Lindgren, Tom Kurkowski (takurkowski@alaska.edu), Scott Rupp, and John Walsh, funded by the Arctic Landscape Conservation Cooperative, Western Alaska Landscape Conservation Cooperative, and Northwest Boreal Landscape Conservation Cooperative (LCCs) and the Alaska Climate Science Center and is licensed under Creative Commons Attribution 4.0 (https://creativecommons.org/licenses/by/4.0/).
DOI: 10.34945/f5nc7x
title: Trunk kinematic and center of pressure displacement time series data during transcutaneous lumbosacral spinal cord stimulation and passive pelvic tilt in human pediatric participants with trunk control impairments due to cervical or thoracic spinal cord injury (pilot clinical trial NCT03975634)

description: STUDY PURPOSE: This was a pilot clinical trial that established the safety and feasibility of transcutaneous lumbosacral electrical spinal cord stimulation (scTS) to augment upright sitting posture and trunk control in children with spinal cord injury. DATA COLLECTED: The feasibility of stimulation to potentiate upright sitting posture was assessed using trunk kinematics (degrees of flexion/extension in cervical, thoracic and lumbar trunk segments) and center of pressure displacement (the change in distance in mediolateral and anteroposterior directions as stimulation intensity was increased as well as during passive pelvic tilt without stimulation. 3D Kinematics (angular excursions) were measured using MVN BIOMECH Awinda MTW2-3A7G6 sensors (Xsens Technologies B.V. Enschede, Netherlands). The data was sampled at 60Hz and collected in MVN: 2019.2.1 software (XML format), mean flexion/extension angles (generated using a Kalman filter (Xsens Kalman Filter, XKF) from a 3D reconstruction of body segment position of trunk segments was calculated during at least 10 seconds of stable baseline sitting prior to stimluation and for when the participant was sitting with transcutaneous spinal stimulation on; center of pressure (COP) displacements were measured using force plate (Burtec, FP4060-NC-1000). Mean normalized COP was quantified as a change from COP values acquired during 10 seconds of baseline sitting to the COP values during sitting with individualized optimal transcutaneous stimulation intensity that induced upright posture. DATA USAGE NOTES: Lumbosacral stimulation acutely evoked robust multi-segmental trunk extension in children with SCI. ). Specifically, scTS at T10 increased extension in the T8-T9 segment on average +/- SD by 5.2 +/- 4.3 degrees, in T12-L1 by 6.2 +/-5.5, in L3-L4 by 6.7+/- 5.5, in L5-S1 by 15+/-12.2, in T8-Pelvis by 32.4+/-28.4 and increased flexion in the T1-C7 segment by 7.1+/-4.7 and in the Head-T8 angle by 19+/-11.5. Stimulation at L1 increased extension in the T8-T9 segment by 5.1+/- +/-4.2, in L3-L4 by 6.6+/-4.2, in L5-S1 by 14.9+/-9.5 , in T8-Pelvis by 29.9 +/- 24.5 and increased +/-16.6. This dataset is one of two that contains raw time series trunk kinematic outcome measures. Safety outcome measures are reported in a separate dataset titled "Safety and feasibility outcomes of transcutaneous electrical spinal cord stimulation in children with spinal cord injury (pilot clinical trial NCT03975634)" and also published on ODC-SCI.
DOI: 10.5063/416vfg
title: Chinook salmon age, sex, and length data from major rivers in Southeast Alaska, 1988-2017

description: Age, sex and length data provide population dynamics information that can indicate how populations trends occur and may be changing. These data can help researchers estimate population growth rates, age-class distribution and population demographics. Knowing population demographics, growth rates and trends is particularly valuable to fisheries managers who must perform population assessments to inform management decisions. These data are therefore particularly important in valuable fisheries like the salmon fisheries of Alaska. This dataset includes age, sex and length data compiled from annual sampling of commercial and subsistence salmon harvests and research projects in the Upper Cook Inlet. It includes data on five salmon species: chinook, chum, coho, pink and sockeye. Age estimates were made by examining scales or bony structures (e.g. otoliths - ear bones). Scales were removed from the side of the fish; usually the left side above the lateral line. Scales or bony structures were then mounted on gummed cards and pressed on acetate to make an impression. The number of freshwater and saltwater annuli (i.e. rings) was counted to estimate age in years. Age is recorded in European Notation, which is a method of recording both fresh and saltwater annuli. For example, for a fish that spent one year in freshwater and 3 years in saltwater, its age is recorded as 1.3. The total fish age is the sum of the first and second numbers, plus one to account for the time between deposition and emergence. Therefore the fish in this example is 5 years old. Fish sex was determined by either examining external morphology (eg. head and belly shape) or internal sex organ. Length was measured in millimeters, generally from mid-eye to the fork of the tail. This dataset includes samples of Chinook salmon from 4 major rivers in Southeast Alaska: the Chilkat River, Stikine River, Taku River, and Unuk River. One original file is included for each river, in addition to a reformatting script, and a reformatted merged file (ASL_formatted_SoutheastSupplement.csv).
DOI: 10.5063/0863q4
title: Sockeye salmon age measurements from scale data, Alaska, 2011-2017

description: This dataset contains digitized scale measurement data from sockeye salmon scales taken in Alaska. The locations where scales were sampled are the Copper River, Coghill River, Egegik River, and Hugh Smith Lake. Salmon scales are aged by examining growth annuli on the scale. Sockeye salmon typically spend one to two winters in fresh water, and one to three winters in the ocean prior to returning to freshwater to spawn. Growth during summer months is rapid, and increases the size of the scale by widely spaced circular rings (circuli). Slow growth during winter months leads to more narrowly spaced circuli. In this dataset, measurements are presented as the length (in millimeters) between each circuli. Accompanying these individual measurements is the established age of the fish (in European notation, where a 13 would be 1 year in fresh water and 3 in the ocean), the sex of the fish, and the length of the fish. Included in this dataset are the original excel files for each aged stock, an Rmarkdown document which reformats and merges these files, and a csv file of all of the data contained within the excel files. The included PDF document details the methods for measuring annuli more clearly.
DOI: 10.5066/f73f4njk
title: Coastal California San Francisco Gartersnake Capture-Mark-Recapture Data (2008-2013)

description: These data are multi-state capture histories of 273 individual San Francisco gartersnakes collected at a site before and after a portion of the site was burned. Data collection began in 2008 and continued until 2013, and the prescribed fire was applied in the fall of 2010. These data support the following paper: Halstead, B. J., Thompson, M. E., Amarello, M. , Smith, J. J., Wylie, G. D., Routman, E. J. and Casazza, M. L. (2018), Effects of prescribed fire on San Francisco gartersnake survival and movement. Jour. Wild. Mgmt.. doi:10.1002/jwmg.21585
DOI: 10.5063/vm49pm
title: Sockeye salmon age measurements from scale data, Alaska, 2011-2017

description: This dataset contains digitized scale measurement data from sockeye salmon scales taken in Alaska. The locations where scales were sampled are the Copper River, Coghill River, Egegik River, and Hugh Smith Lake. Salmon scales are aged by examining growth annuli on the scale. Sockeye salmon typically spend one to two winters in fresh water, and one to three winters in the ocean prior to returning to freshwater to spawn. Growth during summer months is rapid, and increases the size of the scale by widely spaced circular rings (circuli). Slow growth during winter months leads to more narrowly spaced circuli. In this dataset, measurements are presented as the length (in millimeters) between each circuli. Accompanying these individual measurements is the established age of the fish (in European notation, where a 13 would be 1 year in fresh water and 3 in the ocean), the sex of the fish, and the length of the fish. Included in this dataset are the original excel files for each aged stock, an Rmarkdown document which reformats and merges these files, and a csv file of all of the data contained within the excel files. The included PDF document details the methods for measuring annuli more clearly.
DOI: 10.5063/qv3jzw
title: Estimate of total Alaskan salmon abundance by region, 2000-2015

description: This dataset compiles salmon escapement data from Alaska Department of Fish and Game reports and salmon harvest data from commercial, personal use, sport fish, and subsistence sectors to generate an estimate of total salmon abundance in each of the regions defined by the State of Alaska's Salmon and People Project (SASAP). This dataset was assembled to enable a broad view of the salmon resource, whether biological (escapement) or economic/cultural (harvest), across regions. With that intent in mind, a fish is counted within a region if it escaped a fishery and was counted in a river that is contained within that region, or if it was caught in a fishery that is within the region. For commercial fisheries, each commercial fishing district was assigned to a region based on the location of the commercial fishing district relative to the bounding watersheds of the region. No effort was made to determine the region of origin for any commercially caught fish - thus for some regions, fish caught in one region may have been headed to spawn in another. This is especially true of Alaska Peninsula and Aleutian Islands commercial fishing areas, which are well known for having large amounts of Bristol Bay bound fish. Note that some regions have missing escapement data during some years. This dataset includes an R Markdown file which processes the original data and creates figures, the rendered html file generated from running the R Markdown file which includes many figures and data explanation, and several standalone versions of those figures. Data sources: Jeanette Clark and Alaska Department of Fish and Game, Division of Commercial Fisheries Alaska Department of Fish and Game, Division of Sport Fish Alaska Department of Fish and Game, Division of Subsistence. Harvest of Salmon across Commercial, Subsistence, Personal Use, and Sport Fish sectors, Alaska, 1995-2016. Knowledge Network for Biocomplexity. doi:10.5063/F1TT4P73 Andrew Munro and Eric Volk. 2018. Summary of Pacific Salmon Escapement Goals in Alaska with a Review of Escapements from 2001 to 2009. Knowledge Network for Biocomplexity. doi:10.5063/F1416VB4 Andrew Munro and Eric Volk. 2017. Summary of Pacific Salmon Escapement Goals in Alaska with a Review of Escapements from 2007 to 2015. Knowledge Network for Biocomplexity. doi:10.5063/F1GX48V4 James Savereide. 2017. Estimated annual Chinook Salmon escapement at Copper River from 1980 to 2016. Knowledge Network for Biocomplexity. doi:10.5063/F1G15Z4D.