cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive114387.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0106245.10fu
title: SH0106245.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive114388.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive114388.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0106246.10fu
title: SH0106246.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive114389.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive114389.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0106247.10fu
title: SH0106247.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive114390.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive114390.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0106248.10fu
title: SH0106248.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0106249.10fu
title: SH0106249.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.bvwfv9
title: Occurrence Download

description: A dataset containing 343887 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Erigeron annuus"
 ]
}

 The dataset includes 343887 records from 1313 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077757-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nf63aq
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hohenbergia leopoldo-horstii E.Gross, Rauh & Leme"
 ]
}

 The dataset includes 20 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0247899-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tnuzyw
title: Occurrence Download

description: A dataset containing 355 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Muelleranthus stipularis (J.M.Black) A.T.Lee"
 ]
}

 The dataset includes 355 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043948-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2t796g
title: Occurrence Download

description: A dataset containing 238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arhopala bazalus (Hewitson, 1862)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 238 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063985-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.96g47x
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Iris hellenica Mermygkas"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254416-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rmzqm5
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hohenbergia magnispina Leme"
 ]
}

 The dataset includes 36 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0247905-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xq9ag7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hohenbergia oxoniensis W.Weber"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0247912-230224095556074/datasets/export for details.
DOI: 10.15468/dl.y2ss9g
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Iris bracteata S.Watson"
 ]
}

 The dataset includes 235 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254319-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vj9vvg
title: Occurrence Download

description: A dataset containing 296 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Muhlenbergia ×angustata (J.Presl) Kunth"
 ]
}

 The dataset includes 296 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043957-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w4e5tj
title: Occurrence Download

description: A dataset containing 332 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Notothlaspi australe Hook.f."
 ]
}

 The dataset includes 332 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063987-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnhtrh
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is South Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Begonia dregei Otto & A.Dietr."
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019842-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6jth3b
title: Occurrence Download

description: A dataset containing 444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((9.23642 54.85903,21.14738 54.85903,21.14738 63.19852,9.23642 63.19852,9.23642 54.85903))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Coenagrion johanssoni (Wallengren, 1894)",
 "Year 2013-2023"
 ]
}

 The dataset includes 444 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045349-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xbm2tn
title: Occurrence Download

description: A dataset containing 4206 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Vachellia caven (Molina) Seigler & Ebinger"
 ]
}

 The dataset includes 4206 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0247913-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8qk26h
title: Occurrence Download

description: A dataset containing 270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Antigius butleri (Fenton, 1881)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 270 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063977-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f8ek2v
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Glycine max (L.) Merr.",
 "Year 2010-2023"
 ]
}

 The dataset includes 64 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254336-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sadga7
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Wittmackia penduliflora (A.Rich.) Aguirre-Santoro"
 ]
}

 The dataset includes 208 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0247916-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yzy4ss
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phaeostemma fucata (Woodson) Morillo & Krings"
 ]
}

 The dataset includes 5 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020696-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3wpr37
title: Occurrence Download

description: A dataset containing 225998 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-78.4055641266432 1.02933047333517,-77.9566682792231 1.02933047333517,-77.9566682792231 1.48114288821565,-78.4055641266432 1.48114288821565,-78.4055641266432 1.02933047333517))"
 ]
}

 The dataset includes 225998 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013128-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7a7xa4
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Timonius wollastonii Wernham"
 ]
}

 The dataset includes 15 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007107-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abpm7l
title: Occurrence Download

description: A dataset containing 16480 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rana catesbeiana Shaw, 1802"
 ]
}

 The dataset includes 16480 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018873-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.79upqs
title: Occurrence Download

description: A dataset containing 1522 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lynx rufus (Schreber, 1777)"
 ]
}

 The dataset includes 1522 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0203961-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hqx0cd
title: Occurrence Download

description: A dataset containing 141 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eucalyptus camaldulensis subsp. simulata Brooker & Kleinig"
 ]
}

 The dataset includes 141 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018873-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cypbv9
title: Occurrence Download

description: A dataset containing 181 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diospyros cooperi (Hutch. & Dalziel) F.White"
 ]
}

 The dataset includes 181 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0179081-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ld5kmp
title: Occurrence Download

description: A dataset containing 1387 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eucalyptus chlorophylla Brooker & Done"
 ]
}

 The dataset includes 1387 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018874-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kjhzb6
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Callithrix flaviceps (Thomas, 1903)"
 ]
}

 The dataset includes 50 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0168954-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vpuklt
title: Occurrence Download

description: A dataset containing 11860682 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Fabaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11860682 records from 2380 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018874-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ftxkpz
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Tanzania, United Republic of",
 "OccurrenceStatus is Present",
 "TaxonKey is Procavia Storr, 1780"
 ]
}

 The dataset includes 245 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037487-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28013063
title: Supplemental Data 1 for electron shuttling derived denitrification in lake.xlsx

description: This document contains all the Metagenome-Assembled Genes (MAGs) utilized in this study. The details provided for each MAG encompass completeness, contamination levels, taxonomic classification, and the genes detected.
DOI: 10.6084/m9.figshare.28013063.v1
title: Supplemental Data 1 for electron shuttling derived denitrification in lake.xlsx

description: This document contains all the Metagenome-Assembled Genes (MAGs) utilized in this study. The details provided for each MAG encompass completeness, contamination levels, taxonomic classification, and the genes detected.
DOI: 10.5281/zenodo.14504980
title: Afri4Cast Services Outputs

description: Decision making and planning measures for food security and safety require critical information for determining crop health and productivity. Monitoring of several indicators related to crop growth, yield, irrigation, and the spread of disease is key for agricultural decision making at all levels, from farm management to adaptation strategies and relief scheme. The frequent supply of such critical information is urgently required in order to make advance monitoring methods operational.

Afri4Cast provides national-, regional-, parcel-, pixel-specific in season production estimates, mycotoxin formation risk and disease outbreak probability. Apart from the in-season yield forecast production line, AFRI4CAst executes seasonal and long-term model simulations for multiannual yield predictions and mycotoxigenic fungi contamination risk under various climate scenarios at a coarse spatial scale.

Food Security





Rust disease has caused substantial income losses, which were estimated to be in the order of 100s of millions USD per year (2010-2019).Afri4Cast monitors wheat, maize and rice growth, meteorological events and their effect on crop production and rust disease outbreaks, employing satellite remote sensing products, near-real-time (NRT) meteorological observations and agro-meteorological modelling.





Crop and Irrigation Model

Having as input variables of the environmental conditions, the MODEL runs under different climate scenarios and provides output on the biomass and crop yield, allowing the understanding of how crops respond to environmental changes and yield gap analysis.

 

Food Safety



Mycotoxins are potential threats to human and animal health, as well as to crop productivity with economic side effects, leading to the development of maximum tolerated limits for mycotoxins in various countries. Even with the standards in place, in 2004, was recorded the greatest fatal mycotoxin-poisoning outbreak caused by contamination of maize with aflatoxins in Africa.

Afri4Cast predicts the risk level of key mycotoxins (deoxynivalenol-DON and aflatoxin-AFB1) in cereal crops and identify high-infection risk areas.