cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26133634
title: Supplementary Material for: Test-retest reliability of movement displacement during a 20-sec stepping-in-place test in community-dwelling older adults with and without supportive care

description: Introduction: Our recent reports have shown that movement pattern and displacement assessed with an infrared depth sensor during a 20-sec stepping in-place test (ST) correaltes with measures of balance and need for assistance in older individuals. This study investigated ST test-retest reliability in community-dwelling older adults with and without supportive care. Methods: Two groups were included: those not participating (HO: n= 25, 74.7 ± 5.2 yr) and those participating (DSU: n= 41, 78.8 ± 5.8 yr) in regular senior day services (supportive care). HO completed three ST trials, separated by 1 week, while DSU completed two ST trials during the same half-day supportive care visit. Testing was conducted with eyes open. ST measures included head movement path distance [TMD], maximum movement displacement [MMD], knee movement pathlength [KMD], and stepping rate (STEP). TMD•KMD-1 ratio indicated upper-body sway relative to lower-body. Test-retest reliability (Intra-class correlation coefficients; ICC) and between-trial and between group differences (ANCOVA, adjusting for age) were assessed. Results: After adjusting for age, TMD, KMD, TMD•KMD-1 were lesser and STEP was greater in HO than DUS. HO ST variables did not differ across testing days. HO ICC (1, 3) for TMD (0.911 (95% confidence interval: 0.827-0.958)), MMD (0.918 (0.814-0.961)), KMD (0.838 (0.685-0.923)), and TMD•KMD-1 (0.940 (0.884-0.872)) showed strong to very strong reliability. Similaraly, DSU ST variables did not differ across same day trials and ICC (1, 2) for TMD, KMD, and TMD•KMD-1 displayed very strong reliability. Conclusion: These ST variables exhibited excellent test-retest reliability of discriminating between community-dwelling older adults with and without supportive care.
DOI: 10.26131/irsa3
title: Spitzer Enhanced Imaging Products (SEIP) Source List

description: The Spitzer Science Center and IRSA have released a set of Enhanced Imaging Products (SEIP) from the Spitzer Heritage Archive. These include Super Mosaics (combining data from multiple programs where appropriate) and a Source List of photometry for compact sources. The primary requirement on the Source List is very high reliability -- with areal coverage, completeness, and limiting depth being secondary considerations. The SEIP include data from the four channels of IRAC (3.6, 4.5, 5.8, 8 microns) and the 24 micron channel of MIPS. The full set of products for the Spitzer cryogenic mission includes around 42 million sources.

Cryogenic Release 3 includes Spitzer data taken during commissioning and cryogenic operations (Dec 2003 to May 2009), including calibration data.

To ensure high reliability, strict cuts are placed on extracted sources, and some legitimate sources may appear to be missing. These sources are removed by cuts in size, compactness, blending, shape, and SNR, along with multi-band detection requirements. In most fields, the completeness of the source list is well matched to expectations for a SNR=10 cut off. However, in extremely difficult regions, the list may be highly incomplete, especially in areas of high surface brightness and/or high source surface density (e.g. galactic star forming regions, the areas around bright sources, and areas in extended nearby galaxies).

Please include the following standard acknowledgment in any published material that makes use of this data product:

"This work is based [in part] on observations made with the Spitzer Space Telescope, which is operated by the Jet Propulsion Laboratory, California Institute of Technology under a contract with NASA."

This dataset or service is made available by the Infrared Science Archive (IRSA) at IPAC, which is operated by the California Institute of Technology under contract with the National Aeronautics and Space Administration.
DOI: 10.5281/zenodo.10361977
title: Experimental studies reveal bacteriophages can affect precipitation of mineral phases (raw data)
DOI: 10.5281/zenodo.10461479
title: Temperatures of Vein Formation Associated with Plate Interface Deformation Constrained by Oxygen and Clumped Isotope Thermometry

description: In this study, we investigate carbon and oxygen isotopic composition and temperature estimates associated with mineral veins within five mélange units of the Cretaceous Shimanto belt in Japan and one within the Kodiak accretionary complex in Alaska. In-situ isotopic measurements of quartz and calcite in the veins were performed using the Secondary Ion Mass Spectrometer (SIMS). The δ18O values obtained from SIMS measurements were subsequently employed to calculate the temperature at which isotopic equilibrium was last achieved between the quartz-calcite pairs (i.e., the temperature at which the vein minerals formed). Additionally, clumped isotope analyses were conducted on carbonate samples extracted from the veins. Temperatures were then derived from carbonate isotopic clumping (Δ47). Remarkably, temperature estimates obtained from both geothermometers fell within the range of 100 to 250°C, despite the variation in vein types and distinct maximum temperature records of each mélange. This finding suggests that veins formed in response to dehydration processes operating over a temperature range of less than 150°C, with liberated fluids playing a crucial role in facilitating mass transfer.
DOI: 10.6084/m9.figshare.20325345.v1
title: EVALUATION OF ANTIMICROBIAL SUSCEPTIBILITY OF ESCHERICHIA COLI ISOLATED FROM CONTAMINATED AREAS OF MAJENGO SLUM IN MERU COUNTY, KENYA

description: The data give out the trend in antimicrobial susceptibility of E coli isolated from three environmental samples. the analsysis employs standard micriobiological techniques such as culturing ,biochemical testing to confirm the organism and sensitivity testing using five antibiotics. Approval to carry out research was issued by the instituition
DOI: 10.6084/m9.figshare.25283665
title: barsurg_audit anonymised.xlsx

description: A dataset including participant information for 119 patients undergoing bariatric surgery.
DOI: 10.6084/m9.figshare.26124766
title: Supplementary Material for: Development of a Patient-Centered Pathway of Care for Retinoblastoma Patients: A Mixed-Methods Pilot Study

description: Introduction 

Retinoblastoma treatment and follow-up is complex and varies between patients. Pathways of care can enhance quality of care, patient outcomes, safety, satisfaction, and resource optimization. Developing a pathway of care for retinoblastoma was identified as a top research priority by the retinoblastoma community. This study aimed to co-design and pilot a pathway of care called the “Retinoblastoma Journey Map” tailored for caregivers of newly diagnosed children with retinoblastoma. 

Methods 

A working group of patients, health professionals and researchers used human-centred design to ideate, prototype and refine the Retinoblastoma Journey Map. Caregivers of affected children were recruited to use and evaluate the Map. Mixed-methods data was collected on feasibility, acceptability, usability and perceived impact on communication, self-efficacy, anxiety, depression, and the quality of physician-patient interaction. 

Results 

The Retinoblastoma Journey Map consisted of an illustrated roadmap with 25 child-friendly stickers covering clinical treatment, medical education and milestones. Quantitative analysis revealed that the Map was feasible, acceptable, and usable; however, no significant effect on communication, self-efficacy, anxiety, depression or quality of physician-patient interaction was observed. Qualitative analysis identified 6 themes: Primary Use, Challenges, Impact, Limitations, Feasibility, Acceptability and Usability, and Unmet Needs. 

Conclusion 

A pathway of care for retinoblastoma, co-designed by researchers, health professionals and patients, was usable, acceptable, and feasible by caregivers of children with retinoblastoma. While significant effects on communication and physician-patient interaction were not observed, ‘legacy building’ – documentation of the pathway of care by families for later education of their child – emerged as an unanticipated yet important use of the Retinoblastoma Journey Map.
DOI: 10.6084/m9.figshare.26162332
title: Supplementary Material for: Effects of Simvastatin on inflammatory response and biological behavior of adamantinomatous craniopharyngioma

description: Introduction: To investigate the autoinflammatory effect and biological behaviour of simvastatin (SIM) on adamantinomatous craniopharyngioma (ACP) cells. Methods: Craniopharyngiomas imaging, intraoperative observations, and tumour histopathology were employed to investigate the correlation between esters and craniopharyngiomas. Filipin III fluorescent probe verified the validity of SIM on the alternations of synthesized cholesterol in craniopharyngioma cells. The cell counting kit-8 (CCK8) assay detected the impacts of SIM on cell proliferation and determined the IC50 value of tumour cells. Reverse transcription polymerase chain reaction (RT-PCR) measured the expression of inflammatory factors. Flow cytometry technique detected the cell cycle and apoptosis, and cell scratch assay judged the cell migration. Meanwhile, Western blot was adopted to determine the expression of proteins related to inflammation, proliferation, and apoptosis signalling pathways. Results: In the ACP tumour parenchyma, many cholesterol crystalline clefts were observed, and the deposition of esters was closely associated with craniopharyngioma inflammation. After simvastatin intervention, a reduction in cholesterol synthesis within ACP was noted. RT-PCR analysis revealed SIM inhibited the transcription of inflammatory factors in ACP cells. Western blot analysis demonstrated SIM inhibited nuclear factor-kappa B (NF-κB) p65 activation expression while promoted the expressions of Cl-caspase-3 and P38 MAPK. CCK8 assay indicated a decrease in ACP cell activity upon SIM treatment. Scratch assay signified that SIM hindered ACP cell migration. Flow cytometry results suggested that the drug promoted ACP cell apoptosis. Conclusion: SIM suppressed the inflammatory response to craniopharyngiomas by inhibiting craniopharyngioma cholesterol synthesis, inhibited proliferation of ACP cells, and promoted their apoptosis.
DOI: 10.6084/m9.figshare.26172289
title: Supplementary Material for: Inflammatory Alterations to Renal Lymphatic Endothelial Cell Gene Expression in Mouse Models of Hypertension

description: Introduction: Hypertension (HTN) is a major cardiovascular disease that can cause and be worsened by renal damage and inflammation. We previously reported that renal lymphatic endothelial cells (LECs) increase in response to HTN and that augmenting lymphangiogenesis in the kidneys reduces blood pressure and renal pro-inflammatory immune cells in mice with various forms of HTN. Our aim was to evaluate the specific changes that renal LECs undergo in HTN. Methods: We performed single-cell RNA sequencing. Using the angiotensin II-induced and salt-sensitive mouse models of HTN, we isolated renal CD31+ and podoplanin+ cells. Results: Sequencing of these cells revealed three distinct cell types with unique expression profiles, including LECs. The number and transcriptional diversity of LECs increased in samples from mice with HTN, as demonstrated by 597 differentially expressed genes (p&lt;0.01), 274 significantly enriched pathways (p&lt;0.01), and 331 regulons with specific enrichment in HTN LECs. These changes demonstrate a profound inflammatory response in renal LECs in HTN, leading to an increase in genes and pathways associated with inflammation-driven growth and immune checkpoint activity in LECs. Conclusion: These results reinforce and help to further explain the benefits of renal LECs and lymphangiogenesis in HTN.
DOI: 10.6084/m9.figshare.26309869
title: Supplementary Material for: Systematic Evaluation of Hematoma Expansion Models in Spontaneous Intracerebral Hemorrhage: A Meta-Analysis and Meta-Regression Approach

description: Introduction: Accurate prediction of hematoma expansion (HE) in spontaneous intracerebral hemorrhage (sICH) is crucial for tailoring patient-specific treatments and improving outcomes. Recent advancements have yielded numerous HE risk factors and predictive models. This study aims to evaluate the characteristics and efficacy of existing HE prediction models, offering insights for performance enhancement.
Methods: A comprehensive search was conducted in PubMed for observational studies and randomized controlled trials focusing on HE prediction, written in English. The prediction models were categorized based on their incorporated features and modeling methodology. Rigorous quality and bias assessments were performed. A meta-analysis of studies reporting C-statistics was executed to assess and compare the performance of current HE prediction models. Meta-regression was utilized to explore heterogeneity sources.
Results: From 358 initial records, 22 studies were deemed eligible, encompassing traditional models, hematoma imaging feature models, and models based on artificial intelligence (AI) or radiomics. Meta-analysis of 11 studies, involving 12,087 sICH patients, revealed an aggregated C-statistic of 0.74 (95% CI: 0.69 - 0.78) across seven HE prediction models. Eight characteristics related to development cohorts were identified as key factors contributing to performance variability among these models.
Conclusion: The findings indicate that the current predictive capacity for HE risk remains suboptimal. Enhanced accuracy in HE prediction is vital for effectively targeting patient populations most likely to benefit from tailored treatment strategies.
DOI: 10.11588/data/grssbn
title: 14C-based ΔffCO2 estimates for Heidelberg and OPE and input data for the Rhine Valley ffCO2 inversion (2019-2020)

description: These data files show the Δ14CO2, CO2 and CO measurements as well as the 14C-based ΔffCO2 estimates of the flask samples collected in Heidelberg (HEI, 2019-2020) and at the ICOS site Observatoire pérenne de l'environnement (OPE, Sep. 2020 - Mar. 2021). Moreover, modelled ΔffCO2 and ΔCO concentrations based on the Stochastic Time-Inverted Lagrangian Transport (STILT) model and the Netherlands Organization for Applied Scientific Research (TNO) emissions are given for the respective flask hours. These data are used to compare flask-based with inventory-based ΔCO/ΔffCO2 ratios (Maier et al., 2023a). For Heidelberg, also ΔCO-based ΔffCO2 estimates are presented for the afternoon hours in 2019 and 2020. The afternoon 14C- and ΔCO-based ΔffCO2 estimates from Heidelberg are used as observational constraint in the ffCO2 inversion performed in the Rhine Valley (Maier et al., 2023b).
DOI: 10.15468/dl.w2sym7
title: Occurrence Download

description: A dataset containing 11323 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Halyomorpha halys (Stål, 1855)"
 ]
}

 The dataset includes 11323 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044323-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.880771
title: Aquifer thickness along the global coastline: link to shape files

description: Information on aquifer thickness is one of the crucial inputs to numerical groundwater flow models, especially in the coastal areas that are threatened by increasing salt water intrusion leading to declining fresh groundwater resources. Since aquifer thickness data is missing in many parts of the world we designed a methodology to estimate it on global scale using state of the art datasets. We estimated the aquifer thickness by combining global topographical (Weatherhall et al., 2015, doi:10.1002/2015EA000107), lithological (Hartmann et. al, 2012, doi:10.1029/2012GC004370), soil thickness (Pelletier et al., 2016, doi:10.1002/2015MS000526) and sediment thickness from the global PCR-GLOBWB model (de Graaf et. al, 2015, doi:10.5194/hess-19-823-2015) to find the position and slope of the bedrock formation that are overlaid by unconsolidated sediments forming the aquifer system. The dataset includes the estimates of aquifer thickness at the coastline for each cross-section together with corresponding "anchor points" (last point with known thickness from Pelletier et. al, 2016). With this information it is possible to create 2D cross-sectional groundwater flow coupled with salt transport models to estimate the fresh groundwater resources in coastal areas. More attention should be paid to the composition of unconsolidated sediment aquifers in terms of low permeable layers that can play a large role in the distribution of fresh and saline groundwater.
description: Supplement to: Zamrsky, Daniel; Oude Essink, Gualbert H P; Bierkens, Marc F P (2018): Estimating the thickness of unconsolidated coastal aquifers along the global coastline. Earth System Science Data, 10(3), 1591-1603
DOI: 10.1594/pangaea.891475
title: The Arctic combined model and satellite sea ice thickness (CMST) dataset

description: An Arctic sea ice thickness record covering from 2010 to 2016 is generated by assimilating satellite thickness from CryoSat-2 and Soil Moisture and Ocean Salinity (SMOS). The model is based on the Massachusetts Institute of Technology general circulation model (MITgcm) and the assimilation is performed by a local Error Subspace TransformKalman filter (LESTKF) coded in the Parallel Data Assimilation Framework (PDAF).
description: The sea ice thickness data (V1.0) are provided north of 65N, starting from 2010-10-01 and ending on 2016-12-31. Note that the record on 2016-12-31 is just the duplication of 2016-12-30, as we did not have the ensemble atmospheric forcing on 2017-01-01, when we did this work at that time. There are 5 records missing also because of the forcing, and they are linear interpolated between adjacent records.
description: Supplement to: Mu, Longjiang; Losch, Martin; Yang, Qinghua; Ricker, Robert; Losa, Svetlana N; Nerger, Lars (2018): Arctic-wide sea ice thickness estimates from combining satellite remote sensing data and a dynamicice-ocean model with data assimilation during the CryoSat-2 period. Journal of Geophysical Research: Oceans, 123(11), 7763-7780
DOI: 10.1594/pangaea.939736
title: Raw data from surface drifters during MERIAN cruise MSM93

description: Southtek Iridium GPS drifters of type Offshore NOMAD (https://www.southteksl.com/index.php/products/offshore-nomad) were deployed on MSM93 to elucidate the surface flows. The drifters had a 50cm long PVC drogue of type Satis. They were programmed to determine their position with GPS once every 10 minutes and to transmit those positions via Iridium once every 30 minutes. Towards the end of the cruise (on July 28) those intervals were lengthened to hourly position acquisition and transmission in order to increase their life-time. The last transmission from a drifter occurred on November 18, 2020. The following 31 drifters were deployed in the Fram Strait frontal study area: LCE00506, LCE00508, LCE00509, LCE00510, LCE00511, LCE00512, LCE00513, LCE00514, LCE00515, LCE00516, LCE00517, LCE00518, LCE00519, LCE00521, LCE00522, LCE00523, LCE00524, LCE00525, LCE00526, LCE00528, LCE00529, LCE00530, LCE00531, LCE00532, LCE00534, LCE00535, LCE00536, LCE00537, LCE00538, LCE00539, LCE00540. The data is also available through the International Arctic Buoy Program https://iabp.apl.uw.edu/IABP_Table.html.
DOI: 10.17632/8ck8h6z3wp.1
title: High-speed videos of CMT, CSC and DCEN metal transfer modes during WAAM of Ti-alloy

description: Three metal transfer modes were applied in the gas metal arc welding for wire arc additive manufacturing of Ti-6Al-4V alloy. Three high-speed videos of the metal transfer process were shot, the utilized transfer modes were: Cold Metal Transfer (CMT) mode, controlled short-circuiting (CSC) mode and a conventional mode at a direct current with the negative electrode (DCEN). The videos are named accordingly to the abbreviations of the metal transfer modes.
DOI: 10.17632/8k3w6tynwz.1
title: JGR_2023_Reduction_of_Drag_Coefficient_due_to_misaligned_surface_waves

description: This data is large eddy simulation model output of turbulent airflow over misaligned surfaces waves (up to 90 degrees) for strongly forced to weakly forced conditions (wave age up to 10.95) using a wave-following mapped coordinate, for the following manuscript: Manzella, E., Hara, T., Sullivan, P. Reduction of Drag Coefficient due to Misaligned Surface Waves. (Manuscript in preparation) From these data for wind aligned with waves (0 degrees) to wind misaligned with waves (22.5, 45, 67.5, 90 degrees) and wave age (c/u*=1.37, 5.48, 10.95) with corresponding variable names (1x, 4x, 8x) we look at equivalent roughness length and wave growth/decay variables. In addition to the cross-wave component of the velocity (v), we also include the rotated along-wind (U) and cross-wind (V) variables. We look at horizontally averaged vertical profiles of the following: -Wind speed, wind shear, wind speed angle, and wind shear angle -Turbulent kinetic energy -Energy budget (including shear production, transport, and viscous dissipation) -Momentum budget (including pressure stress, turbulent stress, and wave-coherent stress) We also look at phase-averaged flow fields of the following: -Wind speed (horizontal and vertical) -Pressure -Turbulent kinetic energy -Dissipation rate -Vorticity (cross-wind) -Turbulent and wave-coherent stress -Pressure, turbulent tangential stress, and turbulent normal stresses (surface distribution) Finally, we look at cross-wind turbulent instantaneous vorticity fields for the 0 and 90 degrees for the lowest and highest wave ages
DOI: 10.17632/gkhgj65ct4.1
title: IRT score correspondence table for comprehensive residential environment

description: A list of key items and IRT score correspondence tables to assess comprehensive residential environment using CASBEE residential health checklist.
DOI: 10.24432/c57s4h
title: Incident management process enriched event log
DOI: 10.25584/1632005
title: A high-resolution database of mesoscale convective systems and isolated deep convection in the United States for 2004 – 2017

description: The database provides high-resolution (4-km, hourly) information of mesoscale convective systems (MCSs) and isolated deep convection events (IDC) east of the Rocky Mountains over the contiguous United States from 2004 – 2017. The database contains various characteristics of MCSs and IDC, such as their lifecycle evolutions, lifetimes, spatial coverages, echo-top heights, precipitation features, convective and stratiform separation, convective core features, propagation speed, etc.
DOI: 10.25625/jvcjvw
title: Master-Thesis

description: Master-Thesis with detailed derivation of the equations