cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28691804.v1
title: Partial Shading Condition Data for Validating Direct GMPP Computation in Photovoltaic Systems

description: The dataset titled "Partial Shading Condition Data for Validating Direct GMPP Computation in Photovoltaic Systems" contains empirical results used to validate a novel computational approach for directly determining the Global Maximum Power Point (GMPP) in photovoltaic (PV) systems. The data specifically focuses on various partial shading conditions (PSCs) and how they affect the tracking and prediction of the GMPP.Key Features of the Data:<b>Partial Shading Conditions (PSCs):</b> The dataset includes information from multiple shading scenarios, where the irradiance across different modules in a series-connected PV array is varied. These conditions represent real-world shading patterns observed in PV systems.<b>MPP Measurements:</b> For each PSC, the maximum power point (MPP) voltage and current values are recorded for individual modules, as well as for the entire PV array under those specific shading conditions. These MPP values are crucial for validating the hypothesis that the GMPP can be directly computed from the sum of the individual active module MPPs, adjusted for the negative contributions of bypassed modules.<b>Validation of Hypothesis:</b> The data is structured to test and validate the hypothesis that the GMPP can be predicted without the need for search-based algorithms by relying on the contribution of non-bypassed modules. The dataset includes both the actual GMPP and the estimated GMPP values based on the proposed method.<b>Irradiance and Temperature Levels:</b> The data captures the irradiance values for each module, as well as temperature variations, which are integral to understanding how they influence the performance of the modules under partial shading. However, the proposed model does not rely on real-time environmental measurements for GMPP predictionApplications:<b>Model Validation:</b> This data is essential for validating the performance of the Environmental Sensorless Neural Network (ESNN) and its integration into PV systems for GMPP detection.<b>Improvement of GMPP Algorithms:</b> The dataset can be used to refine existing MPPT (Maximum Power Point Tracking) algorithms, particularly under partial shading conditions.<b>Solar Energy Research:</b> It serves as a critical resource for researchers working to enhance the efficiency and robustness of PV systems under real-world dynamic shading and environmental conditions.<br>
DOI: 10.6084/m9.figshare.7998641.v3
title: Gene clusters sequences Nitrospira pangenome

description: Gene clusters sequences from the pangenomics analysis included in the manuscript: "Genomic profiling of <i>Nitrospira</i> species reveals ecological success of comammox <i>Nitrospira</i>"
DOI: 10.17632/6x5bkz42k7
title: Amygdala gene expression

description: Amygdala gene expression profiles in rats exposed to social defeat- and witness stress. Data was generated with NanoString analysis using a custom code set containing 383 genes. Supporting table to "Avp expression in the amygdala is positively correlated with stress-induced comorbid escalated alcohol intake and anxiety-like behavior" by Barchiesi et al.
DOI: 10.17632/yrg5v7pcck
title: Effect of COVID-19 Infection or Vaccination on Hidradenitis Suppurativa Pathogenesis and Outcome

description: 1. Full Methods

2. Supplementary Table 1: Characteristics of Included Studies

3. Supplementary Table 2: Summary of Included Studies

4. Supplementary Table 3: Citations of Included Studies
DOI: 10.6084/m9.figshare.1409646.v1
title: Evidence of homologous recombination in canine distemper virus, a non-segmented negative sense RNA virus

description: Canine distemper virus (CDV) is a major pathogen of dogs that belongs to the genus Morbillivirus of the family Paramyxoviridae. It has a non-segmented single-stranded negative sense RNA genome and can cause severe disease in dogs and wild carnivores. Although homologous recombination has been demonstrated in many members of Paramyxoviridae, for CDV, these events are rarely reported. To detect possible recombination events, all the complete CDV genomes available in GenBank up to August 2014 were screened using distinct algorithms to detect genetic conversions and incongruent phylogenies. Eight putative recombinant viruses derived from different CDV genotypes and also from different hosts were detected. The breakpoints of the recombinant strains were located mainly on the fusion and the hemagglutinin glycoproteins. Our work reinforces that homologous recombination is a frequent phenomena in morbillivirus populations under natural replication and suggests that CDV vaccine strains can play an important role in shaping the evolution of this virus.
DOI: 10.6084/m9.figshare.26910076.v1
title: Costs and cost-effectiveness of interventions based on third generation therapy models to treat symptoms of depression and anxiety: A systematic review and meta-analysis

description: <b>Background: </b>Depression and anxiety are the most prevalent mental health problems globally, and while there are currently a number of effective interventions for both mental health problems, information on the cost-effectiveness and costs associated with these interventions is limited. Especially, in recent interventions such as third generation therapies, there is limited information on the cost-effectiveness and costs associated with these interventions.<b>Objective: </b>This study aimed to evaluate the costs and cost-effectiveness of third-generation therapies for treating depressive and anxiety symptoms.<b>Methods: </b>We conducted a systematic review and meta-analysis, searching SCOPUS, Web of Science, PsycINFO, EMBASE, and MEDLINE from 1980 to March 12, 2024. Randomized controlled trials reporting costs or cost-effectiveness of third-generation therapies for depression or anxiety were included. Two independent reviewers screened studies, extracted data, and assessed risk of bias using the ECOBIAS checklist. Meta-analysis of quality-adjusted life years (QALYs) was conducted using Hedges' g and random-effects models. Costs were standardized to US dollars and adjusted for inflation.<b>Results: </b>Twenty studies met inclusion criteria, with 10 suitable for meta-analysis. Meta-analysis showed no significant difference in QALY improvement between third-generation therapies and control conditions (Hedges' g = 0.015, 95% CI: -0.001 to 0.032; P=0.070). Moderate heterogeneity was observed (I²=47.8%, P=0.032). Subgroup analyses by therapy type (Mindfulness-Based Cognitive Therapy, Behavioral Activation, Acceptance and Commitment Therapy, and Problem-Solving Therapy) also yielded non-significant results. High risk of bias was observed in 50% of studies due to narrow perspective, in 45% due to omission of cost measurement, and in 46% due to insufficient information on discounting. Publication bias was detected (Egger's test: P = 0.011). Our study found no significant difference in the average cost per person between receiving an intervention based on third-generation therapies (M = $2,494.6; SD = $7,090.9) and receiving a control condition (M = $1,912.0; SD = $2,081.3) (t = 0.253; p=0.802).<b>Conclusions:</b> Our study found that interventions based on third-generation therapies do not entail significant additional costs compared to control conditions. However, the interventions based on third-generation therapies did not improve the QALYs of the participants more than the control group.<br>
DOI: 10.11583/dtu.19690837.v1
title: Offshore wind generation time series for technology SP370 HH155 (PECD 2021 update)

description: This data (csv file) provides simulated hourly time series of offshore wind generation with specific power (SP) 370 W/m2 turbines at hub height (HH) of 155 m for the regions shown in the attached map. The analysed offshore wind power plants are sited at the best sites with max 100 km distance to shore, except for the far-offshore North Sea regions (the regions which do not have any connection to shore) where all locations are allowed. The map shows the resulting capacity factors (annual mean). The Excel file gives the average distance to shore for each individual region. Wake losses are modeled, with additional 5 % of other losses and unavailability considered. The time stamps are in GMT; the variable (column) names relate to the region names shown in the maps. The data include also country-level aggregations, e.g., UK00_OFF is the aggregated offshore wind generation of all the UK regions (weighted by regional installed capacities). The data are part of the variable renewable energy generation time series created for ENTSO-E in the 2021 update of the Pan-European Climate Database (PECD) dataset. ENTSO-E has used the data in ERAA 2021 and Winter Outlook 2021-2022 assessments, and they are used in TYNDP 2022. The simulations are carried out by DTU Wind Energy, with the future technology selection and data validation discussed and agreed with ENTSO-E and its members. The linked journal paper (1st link) describes the ERA5-based simulation methodology. It is requested that the paper is cited when the data are used. The linked related journal paper (2nd link) describes the modeling of wake losses for the offshore wind power plants and the storm shutdown behaviour (the smoothest storm shutdown technology is assumed). This item is part of a larger collection of wind and solar data: https://doi.org/10.11583/DTU.c.5939581
DOI: 10.17632/ss5xy6j3jy
title: Efficacy and safety of anti-COVID-19 vaccination in patients with autoimmune blistering diseases: A French national study

description: Supplemental Material concerning our study "Efficacy and safety of anti-COVID-19 vaccination in patients with autoimmune blistering diseases: A French national study"

Materials and Methods, supplemental figures and supplemental tables
DOI: 10.17632/ydwcx9yhpp
title: Kim et al. 2021

description: Abstract: Conserved ATP-dependent chromatin remodelers establish and maintain genome-wide chromatin architectures of regulatory DNA during cellular lifespan, but the temporal interactions between remodelers and chromatin targets have been obscure. We performed live-cell single-molecule tracking for RSC, SWI/SNF, CHD1, ISW1, ISW2, and INO80 remodeling complexes in budding yeast and detected hyperkinetic behaviors for chromatin-bound molecules that frequently transition to the free state for all complexes. Chromatin-bound remodelers display notably higher diffusion than nucleosomal histones, and strikingly fast dissociation kinetics with 4-7 s mean residence times. These enhanced dynamics require ATP binding or hydrolysis by the catalytic ATPase, uncovering an additional function to its established role in nucleosome remodeling. Kinetic simulations show that multiple remodelers can repeatedly occupy the same promoter region on a timescale of minutes, implicating an unending ‘tug-of-war’ that controls a temporally shifting window of accessibility for the transcription initiation machinery. File Descriptions: SMT datasets: Filenames include information about: “factor name_HALO”_”biological replicate”_”laser power”_”frame rate”_”movie number” [i.e. STH1_HALO_WT_Rep1_90mW_10ms_1] .mat files are raw output files from tracking software DiaTrack 3.04, and contains trajectory information (X coordinate, Y coordinate, intensity, goodness of fit, etc.) from each movie. .csv files contain information about trajectory ID, frame number, x coordinate, and y coordinate, for all masked trajectories ≥ 3 frames (no skipping allowed) merged from all biological replicates. Matlab scripts: Analysis of HMM-classified trajectories This repo contains custom scripts for analyzing and quantifying HMM-classified trajectories by vbSPT (output file from 'Batch_vbSPT_classify.m'). Most analysis are done using MATLAB script, with the exception to 'subclassify DCoef' folder which requires running a shell script and an R Script using the 'Sojourner' package. PRISM was used for plotting the results. Each subfolder contains different analysis with its own README file and can be run independently of each other in any order.
DOI: 10.6084/m9.figshare.16855939.v1
title: Phylogenetic Reconstruction

description: Alignments and output phylogenies for phylogenetic reconstruction of 177 species dataset<br>trimmed_orthogroups.tar.xz - alignments for individual gene families<br>concatenated_alignment.phy - concatenation of gene family alignments<br>177_taxa_ASTRAL.newick.txt - ASTRAL multispecies coalescent tree from 177 gene families<br>177_taxa_ML.newick.txt - Maximum Likelihood (LG+C60+G4+F) phylogeny of concatenated alignment<br><br>177_taxa_BI_CATGTR.newick.txt - Bayesian Inference phylogeny estimated under the CAT+GTR model<br>
DOI: 10.6084/m9.figshare.28828403.v1
title: <b>Energy use and economic performance nexus in Sub-Saharan Africa: A multivariate analysis</b>(DATASETS)

description: The increasing concern about climate change has led to a growing interest in low-carbon energy sources, such as renewable energy. Most studies rely on traditional econometric methods, which may not capture the complex dynamics between variables with particular emphasis on developed economies, neglecting the experiences of developing countries. Studies have shown that transitioning to low-carbon energy sources can have numerous benefits, including reducing greenhouse gas emissions and improving energy security. Despite the extensive research on energy use, economic performance, and natural resources, there is still a need for studies that explore the complex relationships between these variables in a comprehensive and integrated manner. This study aims to fill this research gap by investigating the relationships between energy use, economic performance, and natural resources, focusing on low-carbon energy output and resource-based revenue. The study comprehensively analyzes the relationships between energy use, GDP, low-carbon energy output, natural resources, and African economic performance. The results show that GDP, low-carbon energy output, natural gas profit margin, and oil operating surplus significantly affect energy use, with resource-based revenue having a relatively minor impact. The study also reveals complex dynamics between the variables, with both short-term and long-term effects. Based on the findings, the study reveals strong relationships between energy use and these variables, indicating that increases in GDP, low-carbon energy output, natural gas profit margin, and oil operating surplus are associated with substantial increases in energy consumption. Complex and long-term relationships among the variables exist, consistent with the cointegration analysis. The study also revealed that shocks to energy use, GDP, and oil operating surplus have significant and persistent effects on the variables, indicating strong interdependencies.
DOI: 10.6084/m9.figshare.28067993.v1
title: Supplementary files for article "Use of Genome Scale Metabolic Reconstructions of Avian Pathogenic<i>Escherichia coli</i>(APEC) phylotypes for the identification of lineage-specific metabolic pathways" by Long H, Mehat JW, Wu H, van Vliet AHM, La Ragione RM

description: These are supplementary files for the following submitted manuscript:<b>Huijun Long, Jai W. Mehat, HuiHai Wu, Arnoud H. M. van Vliet and Roberto M. La Ragione.</b> Use of Genome Scale Metabolic Reconstructions of Avian Pathogenic <i>Escherichia coli</i> (APEC) phylotypes for the identification of lineage-specific metabolic pathways.The following files are included in this record:1) Pan genome scale model for APEC.<br>- APEC GEM.sfba2) Genome scale models for APEC phylogroups A, B1, B2, C and G.<br>- APEC_GEM_SubModel_A.sfba- APEC_GEM_SubModel_B1.sfba<br>- APEC_GEM_SubModel_B2.sfba<br>- APEC_GEM_SubModel_C.sfba<br>- APEC_GEM_SubModel_G.sfba3) Genome scale models for APEC phylogroups B2, C and G used to test the effects of 3-hydroxylphenoylacetic acid (3-HPAA) on growth.<br>- SubModel_B2_3-HPAA.sfba- SubModel_C_3-HPAA.sfba<br>- SubModel_G_3-HPAA.sfba4) media script files (pfile) for Carbon, Sulphate and Phosphate input.<br>- media_biolog_c.pfile- media_biolog_p.pfile<br>- media_biolog_s.pfile5) media script files (pfile) for the Genome scale models for APEC phylogroups B2, C and G.<br>- media_SubModels.pfile6) media script files (pfile) for single gene knockout (<i>potE</i> and <i>lysA</i>).<br>- KO_lysA.pfile- KO_potE.pfile
DOI: 10.6084/m9.figshare.28928264.v1
title: PANC1_k27ac_1

description: PANC1_k27ac_1
DOI: 10.6084/m9.figshare.29049413.v1
title: Data for "Magnesium and silicon isotopic evidence revealing a non-chondritic inner solar system origin for the ureilite parent body"

description: Table S1: Bulk major element compositions (wt. %) of ureilites analyzed using ICP-OES in this study.Table S2: Si isotope compositions of standards and ureilites analyzed in this study. Table S3: Mg isotope compositions of standards and ureilites analyzed in this study (Double spike). Table S4: Summary of Si and Mg isotope compositions of different types of meteorites reported in the literature since 2008.
DOI: 10.6084/m9.figshare.4233215.v3
title: "The process of mental contamination and mental correction" after Wilson & Brekke (1994) Figure 1

description: Reworking of Wilson & Brekke (1994) Figure 1 "The process of mental contamination and mental correction".<br><br>Wilson, T. D., & Brekke, N. (1994). Mental contamination and mental correction: unwanted influences on judgments and evaluations. Psychological bulletin, 116(1), 1171-142.<br><br>Made with https://www.draw.io/<br><br>To modify load XML file in draw.io<br><br><br>
DOI: 10.17632/pd5dp3phx2
title: Extended TAM

description: Dataset on an extended technology acceptance model
DOI: 10.6084/m9.figshare.1080781.v9
title: UNH-RVAT baseline performance and near-wake measurements: Reduced dataset and processing code

description: Reduced data set and processing/plotting code from UNH-RVAT tow tank baseline experiment, performed in the Spring of 2013. For the most up to date version, see the link below.
DOI: 10.6084/m9.figshare.11889672.v1
title: T. Bryosalmonae Transcriptome Assembly Fasta Files

description: This repository contains the intersect transcriptome of the myxozoan parasite <i>Tetracapsuloides bryosalmonae </i>isolated from two hosts; Bryozoan and Rainbow Trout. <br>The transcriptome of <i>T. brysosalmonae </i>was assembled separately from each host, and then all transcripts present in both assemblies (as determined by reciprocal blast) were identified to form the "Intersect transcriptome".<br>For more details on the materials and methods, please refer to the publication. <br>For completeness, we have also included the transcriptome assemblies used at all stages of analysis as follows:invert_intersect.fa - final intersect transcriptome fish_derived_contigs.fa - assembly of all reads from Fish hostfish_filtered.fa - assembly of reads from Fish host after filtering with fish genomes.invert_all.fa - assembly of all reads from Bryozoan hostinvert_filtered.fa - assembly of reads from Bryozoan host after filtering with <i>T. bryosalmonae </i>draft genome<br>
DOI: 10.6084/m9.figshare.23597097.v5
title: Dataset

description: dataset
DOI: 10.6084/m9.figshare.29036840.v1
title: Data

description: Raw labelled data used for analysis
DOI: 10.6084/m9.figshare.29052230.v1
title: CUBE-MT: A Cultural Benchmark for Multimodal Knowledge Graph Construction with Generative AI

description: Cultural heritage institutions (GLAM) have a societal role of guaranteeing access to their collections independently of location or background, as a pledge for knowledge equity. However, around one billion people (15% of the world’s population) experience some form of disability that hinders such access, especially when considering the multimedia gap: differences in the use of different types of media to convey content to different audiences. Knowledge Graphs are increasingly becoming more multimodal by supporting images and text. However, the extent to which they address the multimedia gap for people with disabilities is not well understood due to the lack of appropriate cultural evaluation frameworks. To address this, here we propose CUBE-MT, a benchmark and dataset that leverages generative AI to build Multimodal Knowledge Graphs (MMKGs) with surrogate, multimedia representations that adapt to the sensory capacities of cultural heritage collection users. We extend the CUBE (CUltural BEnchmark for Text-to-Image models) benchmark and provide 7 modalities (text, images, Braille, speech, music, and 3D models); a collection of prompts to account for their cultural awareness; and a dataset with the resulting MMKG linked to Wikidata. We show usage and evaluate the effectiveness of our approach in an expert survey and a user study with people with aphasia, focusing on perceptual and comprehension differences between original MMKGS objects and those generated by AI.
DOI: 10.6084/m9.figshare.26250083.v1
title: Coupled oscillations orchestrate selective information transmission in visual cortex (Data underlying result figures)

description: Performing visually-guided behavior involves flexible routing of sensory information towards associative areas. We hypothesize that in visual cortical areas, this routing is shaped by a gating influence of the local neuronal population on the activity of the same population’s single neurons. Here, we analyzed beta frequencies (representing local population activity), high-gamma frequencies (representative of the activity of local clusters of neurons), and the firing of single neurons in cortical area MT of behaving rhesus monkeys. Our results show an influence of beta activity on single neurons, predictive of behavioral performance. Similarly, the temporal dependence of high-gamma on beta predicts behavioral performance. These demonstrate a unidirectional influence of network-level neural dynamics on single neuron activity, preferentially routing relevant information. This demonstration of a local top-down influence offers a new perspective onto a core feature of cortical information processing: the selective transmission of sensory information to downstream areas based on behavioral relevance.Material provided on Figshare:To provide open access to the data underlying the figures of this publication, the authors provide the corresponding files here on Figshare.
DOI: 10.6084/m9.figshare.7038680.v1
title: Data storage figshare J Lander.xls

description: Exported Survey data from electronic Survey tool before Analysis, data were analysed using SPSS.
DOI: 10.17632/kcj438xyxv
title: Gobernanza en políticas nacionales de pobreza y educación para el acceso y la permanencia en la educación superior  

description: Se busca avanzar en información que permita desde una perspectiva académica y crítica analizar los procesos de interacción entre los actores institucionales y sociales sobre las políticas nacionales de pobreza y educación para el acceso y la permanencia en la educación superior de Colombia. El método es el estudio de caso con enfoque cualitativo interpretativo, se busca estudiar la particularidad la unicidad, de algunos programas académicos que hacen parte del sistema educativo y que son regulados, y cuentan con presencia de los actores institucionales que participan en el sistema, por ende, comparten lineamientos propios de las políticas en mención. En contraste, las IES en la que están ubicados los programas, operan como un subsistema dentro del sistema, con autonomía universitaria, historia, clasificación e identidad diferenciada de acuerdo a la apropiación de su comunidad, cultura organizacional y ubicación territoria. Los resultados están  orientados a  Determinar los factores territoriales, políticos y sociales que influyen en el acceso a la educación de la población pobre desde la experiencia de sus actores, así como; comprender los procesos de interacción entre los actores sociales e institucionales dados en la políticas de acceso y permanencia a la educación superior de la población focalizada o en estratos 2 y 3