cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/kb9hv8dtvr.1
title: Shaping the aesthetical landscape by using Image statistics measures

description: •	The data collection of the 11-dimensional aesthetic space, constructed with the sample of artistic triangles, has never been realized in the experimental aesthetics literature.  In this research, we offer data that contribute to the understanding of the aesthetic organization of such a space.
•	This aesthetic investigation through the analysis of the 11 developed metrics sheds light on the internal organization of the aesthetic space. The results of this investigation contribute to the evaluation of broad regions of such space where elements of low, medium, and high aesthetic value reside 
•	The data provided can be used to implement automated aesthetic evaluation systems in both artistic and manufacturing contexts.
We provide five data sets:
(a) triangles made by artists;
(b) the distribution of triangles as a function of 11 aesthetic metrics (55 images), provided as a 3D application visualizing data as a catalogue;
c) the plots of the calculated Smooth Kernel Distribution, on two dimensions (55 images);
d) the 3d plots of the Smooth Kernel Distribution calculated in 3 dimensions (110 images), provided as navigable environments in the software Mathematica;
e) aesthetical values for the 83 triangles for all the 11 metrics developed.
DOI: 10.13145/bacdive117415.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/rtvckynwtb.1
title: Quality of primed and stored okra seed

description: Hydro and halo priming methods were used in this study. For the hydro priming, 50 g of okra seeds were soaked in a bowl containing 100 ml distilled water while the halo priming treatment was carried out by soaking 50 g of okra seeds in 100 ml of 2 % NaCl (2 g of NaCl was dissolved in 98 ml of distilled water) for 6, 12 and 24 h at 26 + 2 °C . Untreated seed was used as the control. At 6, 12 and 24 h intervals the halo primed seeds were rinsed under running water for 1 minute and  air dried to its initial moisture content of (11 + 0.5 %) under room temperature. 
150 seeds from each priming treatment and control were kept in Ziplock moisture proof bags and stored in different environments: freezer (-18 °C), storage room (10°C), storage room (19 °C) and ambient room condition (29 0C) for three months in a completely randomized design.
Prior to storage, and after the three months storage period, data were taken on the germination and vigour parameters.
DOI: 10.13145/bacdive117416.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/nbrf5k2c8v.1
title: Example Codes for Atmospheric Analysis with Google Earth Engine

description: This data set presents codes for atmospheric analysis using satellite data in the Google Earth Engine (GEE) interface to detect changes in the concentration of some polluting gases in the atmosphere and its validation with meteorological satellite data.
DOI: 10.13145/bacdive117417.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/cfd9z7ry46.1
title: Data on the association of serum glypican-4 with future major adverse cardiovascular events and mortality in patients undergoing coronary angiography

description: The present study included 760 patients who were referred to elective coronary angiography. Data were recorded by standardized interviews and by standardized examination protocols at our institution and were extracted from medical records. Serum GPC4 levels were measured with a commercially available ELSIA kit. During a follow up period the incidence of MACE, vascular mortality, and all-cause mortality were recorded. The Table includes baseline characteristics and GPC4 values as well as the endpoints major adverse cardiovascular events, vascular mortality, and all-cause mortality occurred during the follow-up period. GPC4 is given as ng/ml as well as z-transformed variable. Furthermore, GPC4 was categorized according to the optimal predictive cut-off value for GPC4. “Sex” describes the biological sex of subjects, whereas “0” stands for “male” and “1” for “female” patients. For other categorical variables“0” encodes “no” and “1” stands for “yes”.
DOI: 10.13145/bacdive117418.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/kybt866fsb.1
title: Zinc Phosphates Final Structures (Mechanochemical ionization – differentiating pressure-, shear-, and temperature-induced reactions in a model phosphate)

description: Final optimized structures of zinc-containing phosphates after releasing the stresses. The  The following files are included:
- initial.xyz contains the initial configuration at 0.5 GPa (decompressed to zero stress);
- iso.xyz contains the configuration after the isotropic compression (decompressed to zero stress);
- zUni.xyz contains the configuration after a uniaxial compression along z-axis (decompressed to zero stress);
- zVol.xyz contains the configuration after a volume-conserving deformation, the main axis is chosen to be z-axis (decompressed to zero stress).
DOI: 10.13145/bacdive117419.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/vvmnd7vtt9.1
title: SPATIAL PROFILING OF THE MAIN PRODUCING UNHULLED GRAIN AREAS IN JAVA ISLAND, INDONESIA 

description: This storage contains data description, Moran scatter plot, and neighbour plot for milled dry grain production in Java Island, Indonesia
DOI: 10.13145/bacdive117420.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/vm5bc4293c.1
title: Data management plan for FAPESP-2019/15434-2.

description: Documents and data related to the USP-UFRGS collaboration project,  which was supported by the State of São Paulo Research Foundation (FAPESP), FAPESP-2019/15434-2.
DOI: 10.13145/bacdive117421.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/gx6jndwrfj.1
title: Parents' language ideologies in the context of trilingual education policy 

description: This data set includes qualitative NVivo coded data that reflect parents' language ideologies in the context of trilingual education policy in Kazakhstan.
DOI: 10.13145/bacdive117422.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117423.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/7g984jm2zc.1
title: Data for Namiki et al., A population of descending neurons that regulate the flight motor of Drosophila, Current Biology

description: See the README.docx file copied in each folder.
DOI: 10.13145/bacdive117424.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/k8d386ndz6.3
title: HNF4A is required to specify glucocorticoid action in the liver

description: The glucocorticoid receptor (GR) is a nuclear hormone receptor critical to the regulation of energy metabolism and the inflammatory response. The actions of GR are highly dependent on cell type and environmental context. Here, we demonstrate the necessity for liver lineage-determining factor hepatocyte nuclear factor 4A (HNF4A) in defining liver-specificity of GR action. In normal mouse liver, the HNF4 motif lies adjacent to the glucocorticoid response element (GRE) at GR binding sites found within regions of open chromatin. In the absence of HNF4A, the liver GR cistrome is remodelled, with both loss and gain of GR recruitment evident. Loss of chromatin accessibility at HNF4A-marked sites leads to loss of GR binding at weak GRE motifs. GR binding and chromatin accessibility are gained at sites characterised by strong GRE motifs, which typically show GR recruitment in non-liver tissues.  The functional importance of these HNF4A-regulated GR sites is further demonstrated by evidence of an altered transcriptional response to glucocorticoid treatment in the Hnf4a-null liver.

This Mendeley Data repository contains supportive data and code for our paper. Methods are described in the text. All experiments conducted on mouse (Mus musculus) liver, all processed data derived from raw sequencing data aligned to the mm10 genome. Differential GR binding analysis incorporated spike-in normalisation (spiked-in Drosophila melanogaster chromatin; reads aligned to dm6 genome).

The "MACS2 GR ChIP-seq peaks, wildtype liver" folder contains the BED files for GR ChIP-seq peaks called in dexamethasone- or vehicle-treated mouse liver (Figures 1 & S1).

The "Output of differential binding and differential expression analyses" folder contains the edgeR, stageR and csaw output, following the methods described in the text, using the code in the "Code for differential binding, differential accessibility and differential expression analyses" folder (Figures 2, 5, S3).

The "HOMER motif discovery" folder contains screenshots of the output from HOMER (http://homer.ucsd.edu/homer/ngs/peakMotifs.html) motif discovery analysis of GR binding sites and sites of differential chromatin accessibility (Figures 1, S1, 2, 4).

The "GIGGLE output" folder contains the output (csv) from GIGGLE analysis of GR binding sites, run through the Cistrome DB Toolkit portal (http://dbtoolkit.cistrome.org/) (Figure 3).

The "Output of csaw differential accessibility analysis" folder contains the output from csaw analysis of ATAC-seq data (Figure 4).
DOI: 10.13145/bacdive117425.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/bd7rm5fw6k.1
title: EVRPTW-MF

description: Instances generated for:
Routing a mixed fleet of electric and conventional vehicles,
Dominik Goeke, Michael Schneider,
European Journal of Operational Research
Volume 245, Issue 1, 16 August 2015, Pages 81-99
DOI: 10.13145/bacdive117426.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/jnzyy6rc5g.1
title: Undermining Effects of Extrinsic Reward in a Web-based Task

description: All data and materials accompanying "Does it Pay to Play?: Undermining Effects of Monetary Reward and Gamification in a Web-based Task"
DOI: 10.17632/zmpc7b6dch.3
title: Interview scripts (faith conversion in Pakistan)

description: Interview Scripts of video interviews on conversion in Sindh
Researcher and Interviewer: Ghulam Hussain
Copyright: Institute of Policy Studies (IPS) Islamabad
DOI: 10.13145/bacdive117427.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117428.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/g2zw6r492g.2
title: Online Self-regulated Learning and Academic Procrastination 30% Data _MA

description: This study investigated the relationship between online self-regulated learning and academic procrastination, the mediating effect of attention control, and the moderating effect of peer support. The study analyzed and processed the questionnaire data of the participants, excluding questionnaires with identical answers and contradictory choices; therefore, it generated 1149 valid responses. This provided 30% of the study’s data.
DOI: 10.17632/gk5yy595sd.1
title: Body growth of replacement dairy heifers from three distinct genetic groups from commercial Brazilian dairy herds - Supplementary Material

description: It is a supplementary material for the manuscript titled "Body growth of replacement dairy heifers from three distinct genetic groups from commercial Brazilian dairy herds" published in Journal of Dairy Science.
DOI: 10.13145/bacdive117429.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117430.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/h2b78y42d7.1
title: Anderson_LOH_v2

description: Simultaneous brain cell type and lineage determined by scRNA-seq reveals stereotyped cortical development

Mutations are acquired frequently, such that each cell’s genome inscribes its history of cell divisions. Common genomic alterations involve loss of heterozygosity (LOH). LOH accumulates throughout the genome, offering large encoding capacity for inferring cell lineage. Using only single cell RNA sequencing (scRNA-seq) of mouse brain cells, we found that LOH events spanning multiple genes are revealed as tracts of monoallelically expressed, constitutionally heterozygous single nucleotide variants (SNVs). We simultaneously inferred cell lineage, marked developmental time points based on X-chromosome inactivation and the total number of LOH events, while identifying cell types from gene expression patterns. Our results are consistent with progenitor cells giving rise to multiple cortical cell types through stereotyped expansion and distinct waves of neurogenesis. This type of retrospective analysis could be incorporated into scRNA-seq pipelines and, compared to experimental approaches for determining lineage in model organisms, is applicable where genetic engineering is prohibited, such as humans.
DOI: 10.13145/bacdive117431.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117432.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/wvhpf2hp8z.1
title: Experimental and analytical datasets for pressure drop and flow distribution in a Z-type flat-plate solar absorber 

description: This repository provides two dataset types for total pressure drop and parallel-flow distribution in a Z-type flat-plate solar thermal absorber with water as the working fluid. The first dataset consists of high-resolution pressure drop measurements at different temperatures under laminar and turbulent flow conditions obtained experimentally using a state-of-the-art hydraulic test rig. The second dataset comprises analytical data on flow distribution in the absorber. Conducting high-resolution pressure measurements, essential for evaluating thermo-hydraulic models, is a sensitive and time-demanding process requiring a relatively elaborated test rig to accurately measure pressure drop at different temperatures and flow rates in the presence of thermal equilibrium. In this context, engineers and researchers can use these datasets to compare and verify developed numerical models for thermo-hydraulic evaluation of pressure drop and flow distribution in flat-plate solar collectors under both laminar and turbulent flow regimes. The article also comprises analytical data for flow distribution in the absorber for several header configurations presented by dimensionless-flow-rate and non-uniformity. This data article is related to the following research article published by a peer-reviewed open access journal:
A. Shantia, W. Streicher, C. Bales, Effect of tapered headers on pressure drop and flow distribution in a Z-type polymeric solar absorber, Sol. Energy. 232 (2022) 283–297. https://doi.org/10.1016/j.solener.2021.11.048.
DOI: 10.13145/bacdive117433.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/7rhvryrkzg.1
title: Identification of key regulatory pathways of basidiocarp formation in Pleurotus spp. using modeling, simulation and system biology studies

description: The predictive model developed indicated that the pinhead to fruit body development process involves most of the regulatory pathway in oyster mushroom
DOI: 10.13145/bacdive117434.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117435.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117436.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.17632/23f7j32zmf.1
title: Anderson_LOH_v3

description: Simultaneous brain cell type and lineage determined by scRNA-seq reveals stereotyped cortical development

Mutations are acquired frequently, such that each cell’s genome inscribes its history of cell divisions. Common genomic alterations involve loss of heterozygosity (LOH). LOH accumulates throughout the genome, offering large encoding capacity for inferring cell lineage. Using only single cell RNA sequencing (scRNA-seq) of mouse brain cells, we found that LOH events spanning multiple genes are revealed as tracts of monoallelically expressed, constitutionally heterozygous single nucleotide variants (SNVs). We simultaneously inferred cell lineage, marked developmental time points based on X-chromosome inactivation and the total number of LOH events, while identifying cell types from gene expression patterns. Our results are consistent with progenitor cells giving rise to multiple cortical cell types through stereotyped expansion and distinct waves of neurogenesis. This type of retrospective analysis could be incorporated into scRNA-seq pipelines and, compared to experimental approaches for determining lineage in model organisms, is applicable where genetic engineering is prohibited, such as humans.
DOI: 10.17632/g9ft8r23h9.1
title: Original Data

description: Oringinal and statistical data, Unprocessed western blots and gels
DOI: 10.13145/bacdive117437.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117438.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117439.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117440.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117441.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117442.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117443.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117444.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117445.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117446.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117447.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117448.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117449.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117450.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117451.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.5792276
title: Final Project for COMP 550 Fall 2021

description: Dataset for final project for comp 550 Fall 2021
DOI: 10.13145/bacdive117452.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.5792275
title: Final Project for COMP 550 Fall 2021

description: Dataset for final project for comp 550 Fall 2021
DOI: 10.13145/bacdive117453.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117454.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117455.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117456.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.