cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.5e52dw
title: Occurrence Download

description: A dataset containing 477 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Fragaria ×ananassa (Weston) Rozier"
 ]
}

 The dataset includes 477 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254904-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jdb573
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Morpho rhetenor (Cramer, 1775)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0211230-220831081235567/datasets/export for details.
DOI: 10.15468/dl.cvpgw8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Schreineria cingulipes japonica Momoi, 1965",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0211231-220831081235567/datasets/export for details.
DOI: 10.25549/inscriptifact-ouc112037060
title: Cuneiform Tablet 1913.14.1685, Spurlock 1913.14.1685

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1685; CDLI P421536 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/1.5) ❧ [Physical Object Note:] 3.2 x 2.2 x 1.6 cm (10 g)
DOI: 10.15468/dl.bcc3js
title: Occurrence Download

description: A dataset containing 14967 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-104.35 23.336,-104.083 23.336,-104.083 23.5,-104.35 23.5,-104.35 23.336))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 14967 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0233180-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.taehnr
title: Occurrence Download

description: A dataset containing 280 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pseudemys gorzugi Ward, 1984",
 "Year 1970-2020"
 ]
}

 The dataset includes 280 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035219-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.emw3kj
title: Occurrence Download

description: A dataset containing 473 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyoscyamus reticulatus L."
 ]
}

 The dataset includes 473 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0250298-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112037028
title: Cuneiform Tablet 1913.14.1685, Spurlock 1913.14.1685

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1685; CDLI P421536 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/1.5) ❧ [Physical Object Note:] 3.2 x 2.2 x 1.6 cm (10 g)
DOI: 10.15468/dl.7mfrn3
title: Occurrence Download

description: A dataset containing 10932270 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is New Zealand"
 ]
}

 The dataset includes 10932270 records from 1363 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001235-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28765568
title: Structural Characterization of SARS-CoV-2 ORF10 via AlphaFold2: Binding Pockets and Conserved Functional Motifs

description: In this study, I present a detailed computational analysis of the <b>SARS-CoV-2 ORF10 protein</b>, combining <b>AlphaFold2-predicted structure</b>, <b>binding site characterization</b>, and <b>evolutionary conservation</b> to elucidate its functional potential. Key findings include:<b>1. Structural Prediction & Quality Assessment</b><b>High-confidence PDB model</b> (<code>ORF10PREDICTIONTHB_..._alphafold2_ptm_model_1_seed_000.pdb</code>) with per-residue confidence (pLDDT &gt;90%) and validation plots (<code>plddt.png</code>, <code>pae.png</code>).<b>Two prominent binding pockets (P_0 and P_1)</b>: Comparative metrics (volume, depth, residue types) provided in <code>detailed_comparison_of_p0_and_p1.csv</code>.<b>2. Binding Site Analysis</b><b>10 surface clefts/cavities</b> ranked by volume (largest: 280.97 Å³), annotated with:<b>Accessibility</b> (e.g., Gap 1: 49.48% exposed vertices) and <b>depth</b> (e.g., Gap 3: 6.90 Å average depth).<b>Residue conservation</b>: Highly conserved gaps (e.g., Gap 1, Gap 9) suggest functional importance.<b>Ligand interactions</b>: Non-empty ligand entries highlight potential molecular binding roles.<b>3. Evolutionary Conservation</b><b>BLAST (UniProt)</b>: 100% identity with ORF10 from <i>Betacoronavirus sp. RpYN06</i> (38-residue overlap; E-value: 9e-17), confirming high conservation across SARS-related strains.<b>Conserved motif (cd21597)</b>: Identified via InterPro, implicating ORF10 in viral processes (e.g., protein-protein interactions or immune modulation).<b>4. Functional Implications</b>Larger, deeper, and conserved gaps (e.g., Gap 1, P_0/P_1) are prime candidates for <b>therapeutic targeting</b>.Conserved motif and sequence similarity suggest a <b>shared functional role</b> in viral pathogenesis among coronaviruses.<b>Methods</b><b>Structure Prediction</b>: AlphaFold2 (ColabFold) with pLDDT/PAE validation.<b>Binding Site Detection</b>: Cleft/cavity analysis for volume, depth, residue properties.<b>Evolutionary Analysis</b>: BLAST (UniProt), InterPro motif scanning.<b>Files Included</b><b>PDB</b>: AlphaFold2-predicted ORF10 structure.<b>CSV</b>: Binding pocket comparisons (P_0/P_1) and gap region metrics.<b>Plots</b>: Model quality (pLDDT, PAE, coverage).<b>Supplementary</b>: BLAST/InterPro results in text format.
DOI: 10.15468/dl.ka6qex
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Streptomyces albireticuli B"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014032-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc4h1m8
title: CCDC 133629: Experimental Crystal Structure Determination

description: Related Article: K.Chinnakali, K.Sriraghavan, Hoong-Kun Fun, V.T.Ramakrishnan|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1125|doi:10.1107/S0108270199002814
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h1rd
title: CCDC 133633: Experimental Crystal Structure Determination

description: Related Article: S.Rajamathe, D.Sethumadhavan, H.S.P.Rao, K.Chinnakali, Hoong-Kun Fun|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1127|doi:10.1107/S0108270199003108
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h10n
title: CCDC 133610: Experimental Crystal Structure Determination

description: Related Article: H.S.P.Rao, S.P.Senthilkumar, K.Chinnakali, Hoong-Kun Fun|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1130|doi:10.1107/S0108270199004151
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h1tg
title: CCDC 133635: Experimental Crystal Structure Determination

description: Related Article: D.Mal, N.K.Hazra, G.D.Nigam, K.Chinnakali, Hoong-Kun Fun|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1129|doi:10.1107/S0108270199003352
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h06t
title: CCDC 133585: Experimental Crystal Structure Determination

description: Related Article: S.Ozturk, S.Isik, M.Macit, Hoong-Kun Fun|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1132|doi:10.1107/S0108270199004242
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h0m7
title: CCDC 133598: Experimental Crystal Structure Determination

description: Related Article: K.Chinnakali, Hoong-Kun Fun, D.Rajagopal, S.Swaminathan, K.Sriraghavan|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1135|doi:10.1107/S0108270199001857
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h0yk
title: CCDC 133608: Experimental Crystal Structure Determination

description: Related Article: K.Chinnakali, Hoong-Kun Fun, A.Senthilvelan, K.Sriraghavan, V.T.Ramakrishnan|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1136|doi:10.1107/S0108270199002693
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h1wj
title: CCDC 133637: Experimental Crystal Structure Determination

description: Related Article: T.K.Sarkar, S.K.Ghosh, G.D.Nigam, K.Chinnakali, Hoong-Kun Fun|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1138|doi:10.1107/S010827019900390X
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h0d0
title: CCDC 133591: Experimental Crystal Structure Determination

description: Related Article: N.Okabe, T.Hayashi|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1142|doi:10.1107/S0108270199004023
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h0zl
title: CCDC 133609: Experimental Crystal Structure Determination

description: Related Article: T.K.Sarkar, S.K.Ghosh, G.D.Nigam, K.Chinnakali, Hoong-Kun Fun|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1140|doi:10.1107/S010827019900311X
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h15t
title: CCDC 133615: Experimental Crystal Structure Determination

description: Related Article: R.Yoshihara, K.Mori, S.Nishiyama, S.Yamamura, H.Hosomi, S.Ohba, Y.Ito|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1144|doi:10.1107/S0108270199004205
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4gzwf
title: CCDC 133575: Experimental Crystal Structure Determination

description: Related Article: M.Sievert, N.Nagel, H.Bock, R.Dienelt|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1147|doi:10.1107/S0108270199003054
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h16v
title: CCDC 133616: Experimental Crystal Structure Determination

description: Related Article: R.Yoshihara, K.Mori, S.Nishiyama, S.Yamamura, H.Hosomi, S.Ohba, Y.Ito|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1144|doi:10.1107/S0108270199004205
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h12q
title: CCDC 133612: Experimental Crystal Structure Determination

description: Related Article: H.Ishida, S.Kashino|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1149|doi:10.1107/S0108270199003777
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h13r
title: CCDC 133613: Experimental Crystal Structure Determination

description: Related Article: H.Ishida, S.Kashino|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1149|doi:10.1107/S0108270199003777
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc4h0k5
title: CCDC 133596: Experimental Crystal Structure Determination

description: Related Article: L.Dupont, B.Pirotte, P.de Tullio|1999|Acta Crystallogr.,Sect.C:Cryst.Struct.Commun.|55|1152|doi:10.1107/S0108270199000669
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.em3rvw
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Mexico",
 "Geometry POLYGON((-124.19666 14.41512,-88.80334 14.41512,-88.80334 28.58488,-124.19666 28.58488,-124.19666 14.41512))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Procyon lotor insularis"
 ]
}

 The dataset includes 35 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006851-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4fyjm
title: Occurrence Download

description: A dataset containing 52122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is FALSE",
 "OccurrenceStatus is Present",
 "HasCoordinate is TRUE",
 "Geometry POLYGON ((-89.9950786389117 35.15099806124715, -89.99633740033656 35.14214983071126, -89.98285902590537 35.140868763977906, -89.98112274051614 35.15022740576046, -89.9950786389117 35.15099806124715))",
 "Year is greater than or equal to 2008",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 52122 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062344-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15482/usda.adc/24970164
title: Dairy production systems for six regions of the U.S. in 1971 and 2020

description: Representative dairy farms were modeled using the Integrated Farm System Model with 20 farms in each of 6 regions of the United States for the years of 1971 and 2020 to determine improvements made in reducing environmental impacts over the 50-year period. Important data and information describing these farms are documented in these tables. These data include the farm location, number of cows and heifers maintained, milk produced, feeds and nutrient contents fed, crop areas, crop yields, fertilizer and lime application rates, irrigation water applied, milking and housing facilities, manure collection, storage and application methods used, and soil characteristics. These data are published as supplementary information for the article “Fifty years of environmental progress for United States dairy farms” published in the Journal of Dairy Science.
DOI: 10.15468/dl.kvybgw
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Erythrolamprus pyburni (Markezich & Dixon, 1979)"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0238832-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b5v7mg
title: Occurrence Download

description: A dataset containing 20265 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Herbario de la Universidad Industrial de Santander"
 ]
}

 The dataset includes 20265 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0194683-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6t4sym
title: Occurrence Download

description: A dataset containing 11860 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Primates"
 ]
}

 The dataset includes 11860 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259879-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8scsdb
title: Occurrence Download

description: A dataset containing 9908 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Clytus arietis (Linnaeus, 1758)",
 "TaxonKey is Cnemidophorus lemniscatus (Linnaeus, 1758)"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9908 records from 169 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012231-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cccevk
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Crossostylis multiflora (Montrouz.) Brongn. & Gris ex Pancher & Sebert"
 ]
}

 The dataset includes 61 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008238-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29v92y
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pristimantis inusitatus (Lynch & Duellman, 1980)"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0194685-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2j9767
title: Occurrence Download

description: A dataset containing 82570 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation, Specimen)",
 "Country is Mauritania",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 82570 records from 182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033208-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.