cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3521009
title: Appendix D. Model-average effect sizes between treatment groups.

description: Model-average effect sizes between treatment groups.
DOI: 10.6084/m9.figshare.3521009.v1
title: Appendix D. Model-average effect sizes between treatment groups.

description: Model-average effect sizes between treatment groups.
DOI: 10.6084/m9.figshare.3521006
title: Appendix E. Predicted parameters for top model response variables, including figures of observed and predicted data.

description: Predicted parameters for top model response variables, including figures of observed and predicted data.
DOI: 10.6084/m9.figshare.3521006.v1
title: Appendix E. Predicted parameters for top model response variables, including figures of observed and predicted data.

description: Predicted parameters for top model response variables, including figures of observed and predicted data.
DOI: 10.6084/m9.figshare.3521003
title: Appendix A. Results from mixed effects models of seedling and sapling dynamics and AICc values used for model selection.

description: Results from mixed effects models of seedling and sapling dynamics and AICc values used for model selection.
DOI: 10.6084/m9.figshare.3521003.v1
title: Appendix A. Results from mixed effects models of seedling and sapling dynamics and AICc values used for model selection.

description: Results from mixed effects models of seedling and sapling dynamics and AICc values used for model selection.
DOI: 10.6084/m9.figshare.3521000
title: Appendix B. Seedling and sapling density, relative growth rate, and survival in low and high harvest intensity populations over time.

description: Seedling and sapling density, relative growth rate, and survival in low and high harvest intensity populations over time.
DOI: 10.6084/m9.figshare.3521000.v1
title: Appendix B. Seedling and sapling density, relative growth rate, and survival in low and high harvest intensity populations over time.

description: Seedling and sapling density, relative growth rate, and survival in low and high harvest intensity populations over time.
DOI: 10.6084/m9.figshare.3520997
title: Appendix A. Derivation of IM classification threshold.

description: Derivation of IM classification threshold.
DOI: 10.6084/m9.figshare.3520997.v1
title: Appendix A. Derivation of IM classification threshold.

description: Derivation of IM classification threshold.
DOI: 10.6084/m9.figshare.3520994
title: Appendix B. Parameter settings for management regime in Sigriswil.

description: Parameter settings for management regime in Sigriswil.
DOI: 10.6084/m9.figshare.3520994.v1
title: Appendix B. Parameter settings for management regime in Sigriswil.

description: Parameter settings for management regime in Sigriswil.
DOI: 10.6084/m9.figshare.3520991
title: Appendix C. Variance decomposition analysis for the variables of the TRM function.

description: Variance decomposition analysis for the variables of the TRM function.
DOI: 10.6084/m9.figshare.3520988
title: Appendix D. Simulated basal area and stem numbers at Sigriswil.

description: Simulated basal area and stem numbers at Sigriswil.
DOI: 10.6084/m9.figshare.3520988.v1
title: Appendix D. Simulated basal area and stem numbers at Sigriswil.

description: Simulated basal area and stem numbers at Sigriswil.
DOI: 10.6084/m9.figshare.3520985
title: Appendix E. Simulated basal area and stem numbers at Scatlè.

description: Simulated basal area and stem numbers at Scatlè.
DOI: 10.6084/m9.figshare.3520985.v1
title: Appendix E. Simulated basal area and stem numbers at Scatlè.

description: Simulated basal area and stem numbers at Scatlè.
DOI: 10.6084/m9.figshare.3520982
title: Appendix F. Harvested basal area and dead trees in Sigriswil.

description: Harvested basal area and dead trees in Sigriswil.
DOI: 10.6084/m9.figshare.3520982.v1
title: Appendix F. Harvested basal area and dead trees in Sigriswil.

description: Harvested basal area and dead trees in Sigriswil.
DOI: 10.6084/m9.figshare.3520979
title: Appendix G. Climate factors in ForClim long-term simulations.

description: Climate factors in ForClim long-term simulations.
DOI: 10.6084/m9.figshare.3520979.v1
title: Appendix G. Climate factors in ForClim long-term simulations.

description: Climate factors in ForClim long-term simulations.
DOI: 10.6084/m9.figshare.3520976
title: Appendix H. Performance values for the different model versions at Sigriswil and Scatlè.

description: Performance values for the different model versions at Sigriswil and Scatlè.
DOI: 10.6084/m9.figshare.3520976.v1
title: Appendix H. Performance values for the different model versions at Sigriswil and Scatlè.

description: Performance values for the different model versions at Sigriswil and Scatlè.
DOI: 10.6084/m9.figshare.3520973
title: Full Archive

description: Full Archive
DOI: 10.6084/m9.figshare.3520973.v1
title: Full Archive

description: Full Archive
DOI: 10.6084/m9.figshare.3520970
title: Appendix A. Multiple element limitation (MEL) model as applied to arctic tundra.

description: Multiple element limitation (MEL) model as applied to arctic tundra.
DOI: 10.6084/m9.figshare.3520970.v1
title: Appendix A. Multiple element limitation (MEL) model as applied to arctic tundra.

description: Multiple element limitation (MEL) model as applied to arctic tundra.
DOI: 10.6084/m9.figshare.3520967
title: Appendix A. ANCOVA results for the relationship between native species richness and both exotic cover and grazing treatment.

description: ANCOVA results for the relationship between native species richness and both exotic cover and grazing treatment.
DOI: 10.6084/m9.figshare.3520964
title: Appendix B. Linear mixed-effects model results for time series analysis of community composition.

description: Linear mixed-effects model results for time series analysis of community composition.
DOI: 10.6084/m9.figshare.3520961
title: Appendix C. ANCOVA results for the association between quantitative measures of grazing intensity and community composition.

description: ANCOVA results for the association between quantitative measures of grazing intensity and community composition.
DOI: 10.6084/m9.figshare.3520958
title: Appendix A. Processing of archival tag time-series: Full description of division of time-series data using a split-moving window analysis, and compression to summary metrics.

description: Processing of archival tag time-series: Full description of division of time-series data using a split-moving window analysis, and compression to summary metrics.
DOI: 10.6084/m9.figshare.3520958.v1
title: Appendix A. Processing of archival tag time-series: Full description of division of time-series data using a split-moving window analysis, and compression to summary metrics.

description: Processing of archival tag time-series: Full description of division of time-series data using a split-moving window analysis, and compression to summary metrics.
DOI: 10.6084/m9.figshare.3520955
title: Appendix B. Simulation experiments: Full parameter tables for simulations and results from the second, more complex simulation scenario two.

description: Simulation experiments: Full parameter tables for simulations and results from the second, more complex simulation scenario two.
DOI: 10.6084/m9.figshare.3520955.v1
title: Appendix B. Simulation experiments: Full parameter tables for simulations and results from the second, more complex simulation scenario two.

description: Simulation experiments: Full parameter tables for simulations and results from the second, more complex simulation scenario two.
DOI: 10.6084/m9.figshare.3520952
title: Appendix A. Tables and figures showing dissimilarity among all the five sites and between pairwise sites by NPMANOVA (Table A1, A2), and decrease of microbial functional genes richness (Fig. A1) and diversity (Fig. A2–A6) along with long-term oil contamination.

description: Tables and figures showing dissimilarity among all the five sites and between pairwise sites by NPMANOVA (Table A1, A2), and decrease of microbial functional genes richness (Fig. A1) and diversity (Fig. A2–A6) along with long-term oil contamination.
DOI: 10.6084/m9.figshare.3520952.v1
title: Appendix A. Tables and figures showing dissimilarity among all the five sites and between pairwise sites by NPMANOVA (Table A1, A2), and decrease of microbial functional genes richness (Fig. A1) and diversity (Fig. A2–A6) along with long-term oil contamination.

description: Tables and figures showing dissimilarity among all the five sites and between pairwise sites by NPMANOVA (Table A1, A2), and decrease of microbial functional genes richness (Fig. A1) and diversity (Fig. A2–A6) along with long-term oil contamination.
DOI: 10.6084/m9.figshare.3520949
title: Appendix A. List of plant species found at each site and summarized in Fig. 3.

description: List of plant species found at each site and summarized in Fig. 3.
DOI: 10.6084/m9.figshare.3520949.v1
title: Appendix A. List of plant species found at each site and summarized in Fig. 3.

description: List of plant species found at each site and summarized in Fig. 3.
DOI: 10.6084/m9.figshare.3520946
title: Appendix B. Contribution of C4-derived carbon for the formation of micro- and macroaggregates over time (years) depicted in Fig. 3.

description: Contribution of C4-derived carbon for the formation of micro- and macroaggregates over time (years) depicted in Fig. 3.
DOI: 10.6084/m9.figshare.3520946.v1
title: Appendix B. Contribution of C4-derived carbon for the formation of micro- and macroaggregates over time (years) depicted in Fig. 3.

description: Contribution of C4-derived carbon for the formation of micro- and macroaggregates over time (years) depicted in Fig. 3.
DOI: 10.6084/m9.figshare.3520943
title: Appendix C. In situ measurements of soil infiltration capacity conducted after the incorporation of biosolids and arrival of colonizing plants.

description: In situ measurements of soil infiltration capacity conducted after the incorporation of biosolids and arrival of colonizing plants.
DOI: 10.6084/m9.figshare.3520943.v1
title: Appendix C. In situ measurements of soil infiltration capacity conducted after the incorporation of biosolids and arrival of colonizing plants.

description: In situ measurements of soil infiltration capacity conducted after the incorporation of biosolids and arrival of colonizing plants.
DOI: 10.6084/m9.figshare.3520940
title: Appendix A. Expectation and variance of overall probability of detection g across multiple independent areas or time periods.

description: Expectation and variance of overall probability of detection g across multiple independent areas or time periods.
DOI: 10.6084/m9.figshare.3520937
title: Appendix B. Calculations of overall probability of detection g at Foote Creek Rim (Young et al. 2003).

description: Calculations of overall probability of detection g at Foote Creek Rim (Young et al. 2003).
DOI: 10.6084/m9.figshare.3520937.v1
title: Appendix B. Calculations of overall probability of detection g at Foote Creek Rim (Young et al. 2003).

description: Calculations of overall probability of detection g at Foote Creek Rim (Young et al. 2003).
DOI: 10.6084/m9.figshare.3520934
title: Supplement 1. R code to calculate posterior distribution of M, total fatality at a wind facility when zero carcasses are observed.

description: File List Xeq0_Rcode.R (MD5: 0189df9bc7f877f78943a34f377c950c) Description The Xeq0_Rcode.R file is an R script file that calculates the posterior distribution of M, the total fatality at a wind facility, assuming observed count of carcasses=0. The posterior distribution is a function of the prior, the overall probability of detecting a carcass killed at the facility (g), and the number of carcasses counted during the search process (x). Since we are assuming x = 0, we only need posterior distributions for each combination of g and prior. For a given prior, the code below calculates an array with a posterior for each value of g. There are three possibilities for g: fixed, uncertain (1.732x), highly uncertain (3x). The degree of uncertainty about g is given in terms of the width of the CI in terms of odds ratios: if Upr and Lwr are upper and lower bounds on CI for g, then odds(Upr)/odds(Lwr) is a measure of uncertainty about g.
DOI: 10.6084/m9.figshare.3520931
title: Appendix A. A table showing the number of samples analyzed for estimating the concentration of fecal corticosterone metabolites obtained from snow burrows, a figure showing the method for extracting activity budgets from radio-tracking data, and a figure showing the relationship between respiratory metabolism and ambient temperature obtained from captive birds in the lab.

description: A table showing the number of samples analyzed for estimating the concentration of fecal corticosterone metabolites obtained from snow burrows, a figure showing the method for extracting activity budgets from radio-tracking data, and a figure showing the relationship between respiratory metabolism and ambient temperature obtained from captive birds in the lab.
DOI: 10.6084/m9.figshare.3520931.v1
title: Appendix A. A table showing the number of samples analyzed for estimating the concentration of fecal corticosterone metabolites obtained from snow burrows, a figure showing the method for extracting activity budgets from radio-tracking data, and a figure showing the relationship between respiratory metabolism and ambient temperature obtained from captive birds in the lab.

description: A table showing the number of samples analyzed for estimating the concentration of fecal corticosterone metabolites obtained from snow burrows, a figure showing the method for extracting activity budgets from radio-tracking data, and a figure showing the relationship between respiratory metabolism and ambient temperature obtained from captive birds in the lab.
DOI: 10.6084/m9.figshare.3520928
title: Appendix A. Summary of topographic variables, derived canopy cover, and large tree density distributions.

description: Summary of topographic variables, derived canopy cover, and large tree density distributions.
DOI: 10.6084/m9.figshare.3520928.v1
title: Appendix A. Summary of topographic variables, derived canopy cover, and large tree density distributions.

description: Summary of topographic variables, derived canopy cover, and large tree density distributions.
DOI: 10.6084/m9.figshare.3520925
title: Appendix A. A comparison of estimation methods.

description: A comparison of estimation methods.
DOI: 10.6084/m9.figshare.3520922
title: Appendix B. Full results from all simulations.

description: Full results from all simulations.
DOI: 10.6084/m9.figshare.3520922.v1
title: Appendix B. Full results from all simulations.

description: Full results from all simulations.
DOI: 10.6084/m9.figshare.3520919
title: Supplement 1. R code for simulation implementation and parameter estimation.

description: File List EstimationComparison.R (MD5: 5055e25ebc61fe8dbf012b48198eadda) Simulations.R (MD5: 56eef6b34cb59a85d5072b0b20e645ec) CreateFigures.R (MD5: 2c19a14d1ac5887ba544c2937d8639ca) Description EstimationComparison.R - This code was used to simulate time-series of length 30 time-step and either 1, 2, or 3 replicated observations at each time-step. Parameters were then estimated using three different methodologies: restricted maximum likelihood (REML) based on first differences, REML based on second differences and maximum likelihood using the Kalman filter, as implemented in the MARSS R package. Simulations.R - This code was used to simulate time-series of varying length, with varying numbers of replicated observations, under two different rates of decline and several different process and non-process error variances. Estimates of trend, process and non-process error variances were then made with the MARSS R package. CreateFigures.R - This code was used to create the figures that appear in the manuscript and appendices.
DOI: 10.6084/m9.figshare.3520916
title: Appendix A. Detailed information of habitat suitability model for gamba grass used in this study.

description: Detailed information of habitat suitability model for gamba grass used in this study.
DOI: 10.6084/m9.figshare.3520916.v1
title: Appendix A. Detailed information of habitat suitability model for gamba grass used in this study.

description: Detailed information of habitat suitability model for gamba grass used in this study.
DOI: 10.6084/m9.figshare.3520913
title: Appendix A. Number and proportion of different land cover types mapped in the landscapes studied.

description: Number and proportion of different land cover types mapped in the landscapes studied.
DOI: 10.6084/m9.figshare.3520913.v1
title: Appendix A. Number and proportion of different land cover types mapped in the landscapes studied.

description: Number and proportion of different land cover types mapped in the landscapes studied.
DOI: 10.6084/m9.figshare.3520910
title: Appendix B. Abundance of natural enemies captured on sticky traps.

description: Abundance of natural enemies captured on sticky traps.
DOI: 10.6084/m9.figshare.3520904
title: Appendix A. Supplementary figures showing the influence of an assumed constant, and LAI dependent, maximum plot evapotranspiration rate on forest development, and figures projecting the impact of thinning on forest dynamics under current, RCP3PD, A1B, and A2 climate scenarios.

description: Supplementary figures showing the influence of an assumed constant, and LAI dependent, maximum plot evapotranspiration rate on forest development, and figures projecting the impact of thinning on forest dynamics under current, RCP3PD, A1B, and A2 climate scenarios.
DOI: 10.6084/m9.figshare.3520904.v1
title: Appendix A. Supplementary figures showing the influence of an assumed constant, and LAI dependent, maximum plot evapotranspiration rate on forest development, and figures projecting the impact of thinning on forest dynamics under current, RCP3PD, A1B, and A2 climate scenarios.

description: Supplementary figures showing the influence of an assumed constant, and LAI dependent, maximum plot evapotranspiration rate on forest development, and figures projecting the impact of thinning on forest dynamics under current, RCP3PD, A1B, and A2 climate scenarios.
DOI: 10.6084/m9.figshare.3520901
title: Appendix A. Tables and figures describing study sites, ANOVA results , model selection , experimental design, seed traps, seed sample histograms, and nonmetric scaling plots with three axes.

description: Tables and figures describing study sites, ANOVA results , model selection , experimental design, seed traps, seed sample histograms, and nonmetric scaling plots with three axes.
DOI: 10.6084/m9.figshare.3520898
title: Appendix B. Table of seed species recorded in the restoration plots and reference forests with information about relative abundance, life form, dispersal type, and seed length.

description: Table of seed species recorded in the restoration plots and reference forests with information about relative abundance, life form, dispersal type, and seed length.
DOI: 10.6084/m9.figshare.3520895
title: Appendix A. Data sources and final products for mapping tree mortality and environmental conditions in Lahav and Dvira forests.

description: Data sources and final products for mapping tree mortality and environmental conditions in Lahav and Dvira forests.
DOI: 10.6084/m9.figshare.3520895.v1
title: Appendix A. Data sources and final products for mapping tree mortality and environmental conditions in Lahav and Dvira forests.

description: Data sources and final products for mapping tree mortality and environmental conditions in Lahav and Dvira forests.
DOI: 10.6084/m9.figshare.3520892
title: Appendix B. List of Landsat satellite images and derived NDVI maps.

description: List of Landsat satellite images and derived NDVI maps.
DOI: 10.6084/m9.figshare.3520892.v1
title: Appendix B. List of Landsat satellite images and derived NDVI maps.

description: List of Landsat satellite images and derived NDVI maps.
DOI: 10.6084/m9.figshare.3520889
title: Appendix C. Structural characteristics of the three sites where dendrochronological sampling took place.

description: Structural characteristics of the three sites where dendrochronological sampling took place.
DOI: 10.6084/m9.figshare.3520889.v1
title: Appendix C. Structural characteristics of the three sites where dendrochronological sampling took place.

description: Structural characteristics of the three sites where dendrochronological sampling took place.
DOI: 10.6084/m9.figshare.3520886
title: Appendix D. Generalized Linear Mixed-Effects Model of mortality proportion.

description: Generalized Linear Mixed-Effects Model of mortality proportion.
DOI: 10.6084/m9.figshare.3520886.v1
title: Appendix D. Generalized Linear Mixed-Effects Model of mortality proportion.

description: Generalized Linear Mixed-Effects Model of mortality proportion.
DOI: 10.6084/m9.figshare.3520883
title: Appendix E. Correlation between forest responses to the first and second droughts.

description: Correlation between forest responses to the first and second droughts.
DOI: 10.6084/m9.figshare.3520883.v1
title: Appendix E. Correlation between forest responses to the first and second droughts.

description: Correlation between forest responses to the first and second droughts.
DOI: 10.6084/m9.figshare.3520880
title: Appendix F. Additional details regarding cluster analysis of NDVI spatiotemporal data.

description: Additional details regarding cluster analysis of NDVI spatiotemporal data.
DOI: 10.6084/m9.figshare.3520880.v1
title: Appendix F. Additional details regarding cluster analysis of NDVI spatiotemporal data.

description: Additional details regarding cluster analysis of NDVI spatiotemporal data.
DOI: 10.6084/m9.figshare.3520877
title: Appendix A. Biological and agronomic characteristics of candidate legume species used in selection of species for inclusion in field experiments and output of plant competition model for all species mix at Rothamsted.

description: Biological and agronomic characteristics of candidate legume species used in selection of species for inclusion in field experiments and output of plant competition model for all species mix at Rothamsted.
DOI: 10.6084/m9.figshare.3520877.v1
title: Appendix A. Biological and agronomic characteristics of candidate legume species used in selection of species for inclusion in field experiments and output of plant competition model for all species mix at Rothamsted.

description: Biological and agronomic characteristics of candidate legume species used in selection of species for inclusion in field experiments and output of plant competition model for all species mix at Rothamsted.
DOI: 10.6084/m9.figshare.3520874
title: Appendix A. Wood density at nests and random sites.

description: Wood density at nests and random sites.
DOI: 10.6084/m9.figshare.3520871
title: Appendix B. Literature reviewed for nest-site selection models.

description: Literature reviewed for nest-site selection models.
DOI: 10.6084/m9.figshare.3520871.v1
title: Appendix B. Literature reviewed for nest-site selection models.

description: Literature reviewed for nest-site selection models.
DOI: 10.6084/m9.figshare.3520868
title: Appendix C. Support for models explaining territory-scale and nest-tree selection.

description: Support for models explaining territory-scale and nest-tree selection.
DOI: 10.6084/m9.figshare.3520868.v1
title: Appendix C. Support for models explaining territory-scale and nest-tree selection.

description: Support for models explaining territory-scale and nest-tree selection.
DOI: 10.6084/m9.figshare.3520865
title: Appendix A. Mark–recapture sample size prediction.

description: Mark–recapture sample size prediction.
DOI: 10.6084/m9.figshare.3520865.v1
title: Appendix A. Mark–recapture sample size prediction.

description: Mark–recapture sample size prediction.
DOI: 10.6084/m9.figshare.3520862
title: Appendix A. Hand-held filter unit details.

description: Hand-held filter unit details.