cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17882/45940
title: Sea and river port services and workforce, maritime and inland shipping business data; benchmark on world largest seaports and EU inland waterway traffic

description: Maritine transport includes seaport services, maritime and inland shipping and river port activities. Most segments are documented as sectors in INSEE's business database. Complementary data on specific workforce, port throughput and the breakdown of the merchant fleet are sourced from transport satellite accounts and databases developed by the ministry in charge of maritime transport. International data on EU and world largest seaports are sourced from Eurostat and Unctad. Inland shipping data on main European waterways are usually published by Eurostat.
DOI: 10.17882/45939
title: Coastal tourism estimated consumption and business data; hotel overnights and international benchmark on visitor consumption and cruise passengers.

description: Coastal tourism is not identified as a specific sector in the the French classification of economic activities (NAF). It includes a number of tourism related services e.g. hotels and restaurants, transport, renting, travel agencies, sporting activities, or other local services, most of which being geographically limited to coastal or shoreline areas. Annual tourism accounts break down tourism consumption into main services as identified in the INSEE business database. Using the latter, value added and employment are estimated. The share of coastal tourism consumption as part of the overall tourism consumption is roughly estimated using both the breakdown of hotel nights by tourism areas and statistical estimates of local consumption. Hotel nights and visitor arrivals are usually published in tourism accounts; international data on visitor stays are usually published by Eurostat and the UNWTO; and the number of cruise passengers is sourced from cruise industry associations.
DOI: 10.17882/45938
title: Offshore oil and gas services: estimated business data; world exploration and production investments and fuel prices

description: Offshore oil and gas services are not identified as a sector in the French classification of economic activities (NAF). They include a range of high value added segments among engineering services but also maritime works and manufacturing activities, some of which are included in other maritime activities analysed in the present report, e.g. maritime works (for offshore oil rig construction), LNG carrier building and cable and pipe making and laying. Turnover is analysed using a rough breakdown per main activity segment as proposed by the industry association. Value added and employment are estimated using INSEE data on larger business sectors. Exploration and production investment and fuel prices data are sourced from the oil and gas extraction industry and IMF, and supplement the description as key drivers of the activity.
DOI: 10.17882/45937
title: Submarine cable manufacture, laying and maintenance turnover, and other estimated business data.

description: The submarine cable chain includes cable making, laying, repair and maintenance. It is not identified as a sector in the French classification of economic activities. The "making" segment is parrt of the cable manufacturing sector while laying and maintenance belong to the electric and telecommunication line construction sector. Turnover is sourced from enterprises and the industry association, and other key figures are estimated using INSEE business data on sectors which include segments of the chain. Operating costs are sensitive to key commidity prices, mainly copper and aluminium, shown in a separate table.
DOI: 10.17882/45936
title: Marine and river civil engineering business data and benchmark on EU countries

description: Maritime works and civil engineering constitute a sector in the French classification of economic activities. Whatever the data source, figures merge maritime works, properly speaking, and river works. Most of the activities are related to operations in or near sea and inland ports. Data come from INSEE (key figures), Eurostat (international benchmark) and the French industry, though the latter's figures are limited to the industry association members.
DOI: 10.17882/45934
title: Ship and boat building, repair and maintenance business data; benchmark on EU turnover and jobs

description: Shipbuilding data include shipbuilding, repair and maintenance, and boat building figures, each of which is described by key figures sourced from the INSEE business database. EU benchmark data are sourced from Eurostat (turnover and employment).
DOI: 10.17882/45920
title: Coastal electricity plants and offshore wind power projects in France: installed capacity and jobs; benchmark on EU offshore wind energy

description: Energy includes electricity plants located on the French shoreline, and marine renewables, of which offshore wind turbines account for the major part. French shoreline plants, most of which are nuclear, are described by the amount of power generated and by local permanent employment, sourced from electricity utilities. Offshore wind power is described by the amount of installed power per site or country.
DOI: 10.17882/45867
title: Marine aggregates: production tonnage and fleet size; business estimates; benchmark on main producing countries

description: Marine aggregates are included in a larger "aggregate extraction" sector in the French classification of economic activities. Key figures are therefore estimated, based on (1) extraction and employment data mainly sourced from the industry, (2) on INSEE's business statistics related to the larger aggregate extraction sector. International figures are limited to extracted volume and tonnage and are sourced from ICES, the only international organisation collecting data at international level.
DOI: 10.17882/45865
title: European maritime economy studies: sectoral coverage and indicators

description: Data provide information: (1) on main national and EU maritime economy reports published by EU countries and the European Commission, in terms of industry and time coverage and of economic indicators documented in their databases; (2) on maritime sectors identified by the EC as having a high potential growth in the years to come.
DOI: 10.17882/45860
title: Fisheries, aquaculture and seafood trade and processing: business data, fleet size and production tonnage per region, and EU data

description: Seafood industry includes fisheries, aquaculture, trade and processing activities. Each of these is characterized by key figures (turnover, value added, employment and exports). In addition, fisheries are described (1) by the amounts of landings and sales per product and French region (using trade data from FranceAgriMer state agency), and per EU country; (2) by a breakdown of the fleet per vessel length segment; aquaculture and processing are described by production tonnage and value per type of product, per region and per main EU producing country. Data are principally sourced from government administrations, INSEE and Eurostat.
DOI: 10.17882/45856
title: Maritime activities in France: overall and detailed turnover, value added and employment

description: "Summary" tables include detailed and overall turnover, value added and employment figures related to each maritime sector, using the latter's "key figures". They are related to the latest two years for which a full set of data is available.
DOI: 10.34740/kaggle/dsv/7571006
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.7899947
title: CT-guided minimally-invasive penile fracture repair

description: ABSTRACT We present the case of a 28 year old patient with an incomplete tear of the tunica albuginea occurred after having sexual intercourse in the female superior position. The diagnostic assessment was performed first clinically, then with CT, owing to its high resolution, allowed to exactly detect the tear location leading to precise preoperative planning. After adequate diagnosis through imaging and proper planning, the patient was performed a selective minimally invasive surgical approach to repair the lesion. The patient had good erection with no angular deformity or plaque formation after a 3-month follow-up.
DOI: 10.6084/m9.figshare.7375568
title: Table S5 from The histone deacetylase NlHDAC1 regulates both female and male fertility in the brown planthopper, <i>Nilaparvata lugens</i>.

description: Histone acetylation is a specific type of chromatin modification that serves as a key regulatory mechanism for many cellular processes in mammals. However, little is known about its biological function in invertebrates. Here, we identified 12 members of histone deacetylases (NlHDACs) in the brown planthopper (BPH), <i>Nilaparvata lugens</i>. RNAi-mediated silencing assay showed that <i>NlHdac1</i>, <i>NlHdac3</i> and <i>NlHdac4</i> played critical roles in female fertility via regulating ovary maturation or ovipositor development. Silencing of <i>NlHdac1</i> substantially increased acetylation level of histones H3 and H4 in ovaries, indicating NlHDAC1 is the main histone deacetylase in ovaries of BPH. RNA sequencing (RNA-seq) analysis showed that knockdown of <i>NlHdac1</i> impaired ovary development via multiple signalling pathways including the TOR pathway. Acoustic recording showed that males with <i>NlHdac1</i> knockdown failed to make courtship songs, and thus were unacceptable to wild-type females, resulting in unfertilized eggs. Competition mating assay showed that wild-type females overwhelmingly preferred to mate with control males over <i>NlHdac1</i>-knockdown males. These findings improve our understanding of reproductive strategies controlled by HDACs in insects and provide a potential target for pest control.
DOI: 10.6084/m9.figshare.12094194
title: Effects of drought stress on physiological responses and gene expression changes in herbaceous peony (<i>Paeonia lactiflora</i> Pall.)

description: Herbaceous peony (<i>Paeonia lactiflora</i> Pall.) is known as the flower phase. This phase is somewhat resistant to drought, but long-term drought and severe water shortage will affect its normal growth and development. In this study, physiological indices and the transcriptome of <i>P. lactiflora</i> were determined to clarify its physiological responses and gene expression changes under drought stress. The results showed that under drought stress, soluble sugar content, peroxidase (POD), catalase (CAT) and ascorbate peroxidase (APX) activities, and chlorophyll, carotenoid and flavonoid contents were significantly increased, and soluble protein content, superoxide dismutase (SOD), glutathione reductase (GR), dehydroascorbate reductase (DHAR), monodehydroascorbate reductase (MDHAR), ascorbic acid (AsA) and glutathione (GSH) activity first increased and then decreased after day 14. Moreover, drought stress also significantly reduced chlorophyll content, photosynthesis and chlorophyll fluorescence parameters. Transcriptomic analysis revealed that compared with the Control, 10,747 differentially expressed genes (DEGs) were upregulated and 11,835 downregulated under drought stress. These DEGs were classified into three categories and 46 functional groups by GO function classification. The 3,179 DEGs were enriched into 128 pathways by KEGG pathway enrichment. The ROS system, chlorophyll degradation and photosynthetic capacity, as well as secondary pathways of biosynthesis and sugar metabolism were included. Additionally, relevant genes expressed in some metabolic pathways were discovered. These results provide a theoretical basis for understanding the responses of <i>P. lactiflora</i> to drought stress.
DOI: 10.6084/m9.figshare.14715055
title: Additional file 13 of Joint contributions of the gut microbiota and host genetics to feed efficiency in chickens

description: Additional file 12: Table S5. Co-occurrence network of jejunal microbial taxa.
DOI: 10.6084/m9.figshare.8948318
title: MOESM1 of Dysbiosis of the gut microbiome is associated with CKD5 and correlated with clinical indices of the disease: a caseâ controlled study

description: Additional file 1. The unique species in three groups.
DOI: 10.6084/m9.figshare.8948318.v1
title: MOESM1 of Dysbiosis of the gut microbiome is associated with CKD5 and correlated with clinical indices of the disease: a caseâ controlled study

description: Additional file 1. The unique species in three groups.
DOI: 10.6084/m9.figshare.7375553
title: Table S2 from The histone deacetylase NlHDAC1 regulates both female and male fertility in the brown planthopper, <i>Nilaparvata lugens</i>.

description: Histone acetylation is a specific type of chromatin modification that serves as a key regulatory mechanism for many cellular processes in mammals. However, little is known about its biological function in invertebrates. Here, we identified 12 members of histone deacetylases (NlHDACs) in the brown planthopper (BPH), <i>Nilaparvata lugens</i>. RNAi-mediated silencing assay showed that <i>NlHdac1</i>, <i>NlHdac3</i> and <i>NlHdac4</i> played critical roles in female fertility via regulating ovary maturation or ovipositor development. Silencing of <i>NlHdac1</i> substantially increased acetylation level of histones H3 and H4 in ovaries, indicating NlHDAC1 is the main histone deacetylase in ovaries of BPH. RNA sequencing (RNA-seq) analysis showed that knockdown of <i>NlHdac1</i> impaired ovary development via multiple signalling pathways including the TOR pathway. Acoustic recording showed that males with <i>NlHdac1</i> knockdown failed to make courtship songs, and thus were unacceptable to wild-type females, resulting in unfertilized eggs. Competition mating assay showed that wild-type females overwhelmingly preferred to mate with control males over <i>NlHdac1</i>-knockdown males. These findings improve our understanding of reproductive strategies controlled by HDACs in insects and provide a potential target for pest control.
DOI: 10.6084/m9.figshare.12094194.v1
title: Effects of drought stress on physiological responses and gene expression changes in herbaceous peony (<i>Paeonia lactiflora</i> Pall.)

description: Herbaceous peony (<i>Paeonia lactiflora</i> Pall.) is known as the flower phase. This phase is somewhat resistant to drought, but long-term drought and severe water shortage will affect its normal growth and development. In this study, physiological indices and the transcriptome of <i>P. lactiflora</i> were determined to clarify its physiological responses and gene expression changes under drought stress. The results showed that under drought stress, soluble sugar content, peroxidase (POD), catalase (CAT) and ascorbate peroxidase (APX) activities, and chlorophyll, carotenoid and flavonoid contents were significantly increased, and soluble protein content, superoxide dismutase (SOD), glutathione reductase (GR), dehydroascorbate reductase (DHAR), monodehydroascorbate reductase (MDHAR), ascorbic acid (AsA) and glutathione (GSH) activity first increased and then decreased after day 14. Moreover, drought stress also significantly reduced chlorophyll content, photosynthesis and chlorophyll fluorescence parameters. Transcriptomic analysis revealed that compared with the Control, 10,747 differentially expressed genes (DEGs) were upregulated and 11,835 downregulated under drought stress. These DEGs were classified into three categories and 46 functional groups by GO function classification. The 3,179 DEGs were enriched into 128 pathways by KEGG pathway enrichment. The ROS system, chlorophyll degradation and photosynthetic capacity, as well as secondary pathways of biosynthesis and sugar metabolism were included. Additionally, relevant genes expressed in some metabolic pathways were discovered. These results provide a theoretical basis for understanding the responses of <i>P. lactiflora</i> to drought stress.
DOI: 10.6084/m9.figshare.13142491.v1
title: Additional file 7 of Genome-wide study of pineapple (Ananas comosus L.) bHLH transcription factors indicates that cryptochrome-interacting bHLH2 (AcCIB2) participates in flowering time regulation and abiotic stress response

description: Additional file 7: Table S7. List of primers used in the present study.
DOI: 10.6084/m9.figshare.13142479
title: Additional file 4 of Genome-wide study of pineapple (Ananas comosus L.) bHLH transcription factors indicates that cryptochrome-interacting bHLH2 (AcCIB2) participates in flowering time regulation and abiotic stress response

description: Additional file 4: Table S4. Amino acid sequences from the bHLH domain region. Gene IDs in red represent pineapple CIB genes.
DOI: 10.6084/m9.figshare.13142479.v1
title: Additional file 4 of Genome-wide study of pineapple (Ananas comosus L.) bHLH transcription factors indicates that cryptochrome-interacting bHLH2 (AcCIB2) participates in flowering time regulation and abiotic stress response

description: Additional file 4: Table S4. Amino acid sequences from the bHLH domain region. Gene IDs in red represent pineapple CIB genes.
DOI: 10.6084/m9.figshare.13142488.v1
title: Additional file 6 of Genome-wide study of pineapple (Ananas comosus L.) bHLH transcription factors indicates that cryptochrome-interacting bHLH2 (AcCIB2) participates in flowering time regulation and abiotic stress response

description: Additional file 6: Table S6. The expression profile of pineapple bHLH genes in different tissue and developmental stages. Details of the samples are: sepal Se1–Se4, gynoecium Gy1- Gy7, ovule Ov1–Ov7, petal Pe1–Pe3, stamen St1–St6, fruit ‘Fr_S1–Fr_S7’, root ‘Ro’, leaf ‘Le’, and flower ‘Fl’ where ‘S’ is the abbreviation for ‘stage.
DOI: 10.6084/m9.figshare.7375517.v1
title: Table S3 from The histone deacetylase NlHDAC1 regulates both female and male fertility in the brown planthopper, <i>Nilaparvata lugens</i>

description: Histone acetylation is a specific type of chromatin modifications that serves as a key regulatory mechanism for many cellular processes in mammals. However, little is known about its biological function in invertebrates. Here, we identified 12 members of histone deacetylases (NlHDACs) in the brown planthopper (BPH), <i>Nilaparvata lugens</i>. RNAi-mediated silencing assay showed that the <i>NlHdac1</i>, <i>NlHdac3</i> and <i>NlHdac4</i> played critical roles in female fertility via regulating ovary maturation or ovipositor development. Silencing of <i>NlHdac1</i> substantially increased acetylation level of histones H3 and H4 in ovaries, indicating NlHDAC1 is the main histone deacetylase in ovaries of BPH. RNA sequencing (RNA-seq) analysis showed that knockdown of <i>NlHdac1</i> impaired ovary development via multiple signalling pathways including the TOR pathway. Acoustic recording showed that males with <i>NlHdac1</i> knockdown failed to make courtship songs, and thus were unacceptable to wild-type females, resulting in unfertilized eggs. Competition mating assay showed that wild-type females overwhelmingly preferred to mate with control males over <i>NlHdac1</i>-knockdown. These findings improve our understanding of reproductive strategies controlled by HDACs in insects and provide a potential target for pest control.
DOI: 10.6084/m9.figshare.8948375.v1
title: Additional file 15: of A single bacterium restores the microbiome dysbiosis to protect bones from destruction in a rat model of rheumatoid arthritis

description: Table S1. Metagenomic sequencing data for the SD rat microbiome. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.7899992.v1
title: Ginsenoside Rg1 inhibits dietary-induced obesity and improves obesity-related glucose metabolic disorders

description: Obesity and its consequent type 2 diabetes are significant threats to global health. Emerging evidence indicates that ginsenosides from ginseng (Panax ginseng) have anti-diabetic activity. We hypothesized that ginsenosides Rg1 could suppress dietary-induced obesity and improve obesity-related glucose metabolic disorders. Our results showed that ginsenoside Rg1 attenuated dietary-induced body weight gain and fat accumulation in white adipocyte tissue of mice fed a high-fat diet. Furthermore, we found that ginsenosides Rg1 not only decreased fasting glucose concentration and the 2-h postprandial glucose concentration, but also improved insulin resistance and glucose intolerance in those mice. Ginsenoside Rg1 also activated the AMPK pathway in vitro and in vivo and increased plasma membrane translocation of GLUT4 in C2C12 skeletal muscle cells. In conclusion, our observations suggested that ginsenoside Rg1 inhibited dietary-induced obesity and improved obesity-related insulin resistance and glucose intolerance by activation of the AMPK pathway.
DOI: 10.6084/m9.figshare.7900118
title: Establishment of a rat model for uterine leiomyomas based on Western and traditional Chinese medicine theories

description: Uterine leiomyomas (ULs) are benign monoclonal tumors that arise from the underlying myometrial tissue in the uterus. Effective therapies are still lacking because of poor understanding of the pathophysiology and epidemiology. Hence, it is urgent to establish efficient animal models to screen novel anti-UL therapies. In this study, for the first time, traditional Chinese medicine and Western medicine were combined to establish an animal model of ULs in rats. In order to evaluate the function and value of the novel model, it was compared with other models. The long-term and short-term rat models for ULs were established using progesterone and diethylstilbestrol. Rats in Qi stagnation and blood stasis group were injected with epinephrine hydrochloride and received chronic unpredictable stress for two weeks. Rats in combining disease with syndrome group (CDWSG) received not only epinephrine hydrochloride injection and chronic unpredictable stress but also progesterone and diethylstilbestrol treatment. We analyzed differences in organ coefficient, uterus size, uterine pathology, concentrations of progesterone, estradiol, progesterone receptor, estrogen receptor, expression of desmin, α-smooth muscle actin, and vimentin among the five groups. The animal model of ULs was successfully constructed by loading the rats with estrogen and progesterone. The rat model of CDWSG was more stable than other groups and the method was the most efficient.
DOI: 10.6084/m9.figshare.7900139
title: Strontium ranelate inhibits wear particle-induced aseptic loosening in mice

description: The imbalance between bone formation and osteolysis plays a key role in the pathogenesis of aseptic loosening. Strontium ranelate (SR) can promote bone formation and inhibit osteolysis. The aim of this study was to explore the role and mechanism of SR in aseptic loosening induced by wear particles. Twenty wild-type (WT) female C57BL/6j mice and 20 sclerostin-/- female C57BL/6j mice were used in this study. Mice were randomly divided into four groups: WT control group, WT SR group, knockout (KO) control group, and KO SR group. We found that SR enhanced the secretion of osteocalcin (0.72±0.007 in WT control group, 0.98±0.010 in WT SR group, P=0.000), Runx2 (0.34±0.005 in WT control group, 0.47±0.010 in WT SR group, P=0.000), β-catenin (1.04±0.05 in WT control group, 1.22±0.02 in WT SR group, P=0.000), and osteoprotegerin (OPG) (0.59±0.03 in WT control group, 0.90±0.02 in WT SR group, P=0.000). SR significantly decreased the level of receptor activator for nuclear factor-κB ligand (RANKL) (1.78±0.08 in WT control group, 1.37±0.06 in WT SR group, P=0.000) and improved the protein ratio of OPG/RANKL, but these effects were not observed in sclerostin-/- mice. Our findings demonstrated that SR enhanced bone formation and inhibited bone resorption in a wear particle-mediated osteolysis model in wild-type mice, and this effect relied mainly on the down-regulation of sclerostin levels to ameliorate the inhibition of the canonical Wnt pathway.