cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3245484
title: Supporting data and code for "Benthic habitats do show a significant latitudinal diversity gradient: a comment on Kinlock et al. (2018)".

description: R code and dataset for: Menegotto A., Kurtz M.N. & Lana P.C. 2019. Benthic habitats do show a significant latitudinal diversity gradient: a comment on Kinlock et al. (2018). Global Ecology and Biogeography, 28, 1712-1717.
DOI: 10.5281/zenodo.3245483
title: Supporting data and code for "Benthic habitats do show a significant latitudinal diversity gradient: a comment on Kinlock et al. (2018)".

description: R code and dataset for: Menegotto A., Kurtz M.N. & Lana P.C. 2019. Benthic habitats do show a significant latitudinal diversity gradient: a comment on Kinlock et al. (2018). Global Ecology and Biogeography, 28, 1712-1717.
DOI: 10.5281/zenodo.6611054
title: Global arboreal pollen database for Termination V (404-433 kyr BP)

description: This dataset is a global compilation of arboreal pollen records covering Termination V (~404-433 kyr BP).<br> 1) Arboreal pollen proxy (Arboreal pollen (AP) or fern spores) percentages were computed for 19 pollen records covering large portions of Termination V (404-433 kyr BP) at a global scale (Sheet 1-19)<br> 2) The compiled arboreal pollen proxy percentages were resampled with a 2-kyr timestep from 405 to 433 kyr BP (Sheet 20)<br> 3) The resampled arboreal pollen proxy percentages were classified in four forest groups defined according to their main bioclimatic specificity (Eurosiberian-Boreoamerican (ES-BA), Subtropical-North, Tropical, Subtropical-South) (Sheet 21). The Eurosiberian-Boreoamerican group (ES-BA), as defined by Braun-Blanquet (1930), covers boreal and temperate forests. Therefore, both Tibetan Plateau pollen records (Heqing and ZB13-C2) are counted in the ES-BA group, the high altitude compensating for their relatively low latitudes. Although Tenaghi Philippon and Lake Ohrid records are on the geographical boundary with the Mediterranean region, they are also classified in the ES-BA group for they rather reflect a temperate forest cover. The Northern Hemisphere Subtropical group (Subtropical-N) encompasses warm temperate forests of the Northern Hemisphere and therefore extends beyond the geographical boundaries of the Mediterranean region (Mediterranean sensu lato). The Tropical group (T) refers to tropical and afromontane forests. Finally, the Southern Hemisphere Subtropical group (Subtropical-S) only includes the MD96-2048 record which is at the limit between tropical and subtropical forests (Table 2). More information on the forest groups is provided in the associated publication: https://doi.org/10.5194/cp-2021-14
description: {"references": ["doi.org/10.5194/cp-2021-143"]}
DOI: 10.5281/zenodo.6611053
title: Global arboreal pollen database for Termination V (404-433 kyr BP)

description: This dataset is a global compilation of arboreal pollen records covering Termination V (~404-433 kyr BP).<br> 1) Arboreal pollen proxy (Arboreal pollen (AP) or fern spores) percentages were computed for 19 pollen records covering large portions of Termination V (404-433 kyr BP) at a global scale (Sheet 1-19)<br> 2) The compiled arboreal pollen proxy percentages were resampled with a 2-kyr timestep from 405 to 433 kyr BP (Sheet 20)<br> 3) The resampled arboreal pollen proxy percentages were classified in four forest groups defined according to their main bioclimatic specificity (Eurosiberian-Boreoamerican (ES-BA), Subtropical-North, Tropical, Subtropical-South) (Sheet 21). The Eurosiberian-Boreoamerican group (ES-BA), as defined by Braun-Blanquet (1930), covers boreal and temperate forests. Therefore, both Tibetan Plateau pollen records (Heqing and ZB13-C2) are counted in the ES-BA group, the high altitude compensating for their relatively low latitudes. Although Tenaghi Philippon and Lake Ohrid records are on the geographical boundary with the Mediterranean region, they are also classified in the ES-BA group for they rather reflect a temperate forest cover. The Northern Hemisphere Subtropical group (Subtropical-N) encompasses warm temperate forests of the Northern Hemisphere and therefore extends beyond the geographical boundaries of the Mediterranean region (Mediterranean sensu lato). The Tropical group (T) refers to tropical and afromontane forests. Finally, the Southern Hemisphere Subtropical group (Subtropical-S) only includes the MD96-2048 record which is at the limit between tropical and subtropical forests (Table 2). More information on the forest groups is provided in the associated publication: https://doi.org/10.5194/cp-2021-14
description: {"references": ["doi.org/10.5194/cp-2021-143"]}
DOI: 10.5281/zenodo.6611017
title: Urbanization dynamics of Jammu City in India: An MBRA based approach using Landsat data

description: This dataset includes the LULC maps developed using the Landsat 8/7 datasets for the years 2002, 2013 and 2021 for the Jammu district in India. The dataset further includes the 1 km interval buffer rings for the multi-buffer ring analysis for retrieving urbanization parameters such as the urban area, urban density and urban growth rate. Additionally, a quality index is derived based on these parameters and an amenity database to compare the status of Jammu and Indore cities.
DOI: 10.5281/zenodo.6611016
title: Urbanization dynamics of Jammu City in India: An MBRA based approach using Landsat data

description: This dataset includes the LULC maps developed using the Landsat 8/7 datasets for the years 2002, 2013 and 2021 for the Jammu district in India. The dataset further includes the 1 km interval buffer rings for the multi-buffer ring analysis for retrieving urbanization parameters such as the urban area, urban density and urban growth rate. Additionally, a quality index is derived based on these parameters and an amenity database to compare the status of Jammu and Indore cities.
DOI: 10.6084/m9.figshare.19350230
title: Dataset Metagenomic analysis of Kuwaiti soils

description: The metagenomic analysis of three types of Kuwaiti soils using high throughput amplicon sequencing (HTS) techniques. The aim of the project was to determine whether the bacterial population diversity in the three soils was reflected in the diversity of a key functional gene crucial to the biodegradation of hydrocarbons present in soils.
DOI: 10.6084/m9.figshare.19350230.v1
title: Dataset Metagenomic analysis of Kuwaiti soils

description: The metagenomic analysis of three types of Kuwaiti soils using high throughput amplicon sequencing (HTS) techniques. The aim of the project was to determine whether the bacterial population diversity in the three soils was reflected in the diversity of a key functional gene crucial to the biodegradation of hydrocarbons present in soils.
DOI: 10.34740/kaggle/dsv/3740472
title: english to farsi
DOI: 10.5281/zenodo.6610261
title: NPM 100k and 300k dependency data

description: This is the dependency data for the top 100000 and top 300000 packages (in lexicographic order) with the following structure: <pre><code class="language-json">[{ "name": "react", "versions": { "1.00": { "timestamp": "06-05-2022T10:00:01", "dependencies": { "name": "^1.0.2" } } } }, ... ]</code></pre>
DOI: 10.5281/zenodo.6611040
title: Analysis Data, "Drivers and Determinants of Strain Dynamics Following Fecal Microbiota Transplantation"

description: This package contains datasets in `Rdata` format that underlie the analyses presented in the study, "Drivers and Determinants of Strain Dynamics Following Fecal Microbiota Transplantation" by Schmidt, Li et al.<br> Corresponding code, referring to these datasets, is available via `github`: https://github.com/grp-bork/fmt_metastudy The study is available as a preprint: https://www.biorxiv.org/content/10.1101/2021.09.30.462010v1 The present package contains processed/derived data. Metagenome-Assembled Genomes generated for the same study are available via `Zenodo` under: https://zenodo.org/record/5534163#.YpoRFy8RrzA<br> doi: 10.5281/zenodo.5534163
description: {"references": ["https://www.biorxiv.org/content/10.1101/2021.09.30.462010v1", "https://doi.org/10.5281/zenodo.5534162"]}
DOI: 10.5281/zenodo.6611039
title: Analysis Data, "Drivers and Determinants of Strain Dynamics Following Fecal Microbiota Transplantation"

description: This package contains datasets in `Rdata` format that underlie the analyses presented in the study, "Drivers and Determinants of Strain Dynamics Following Fecal Microbiota Transplantation" by Schmidt, Li et al.<br> Corresponding code, referring to these datasets, is available via `github`: https://github.com/grp-bork/fmt_metastudy The study is available as a preprint: https://www.biorxiv.org/content/10.1101/2021.09.30.462010v1 The present package contains processed/derived data. Metagenome-Assembled Genomes generated for the same study are available via `Zenodo` under: https://zenodo.org/record/5534163#.YpoRFy8RrzA<br> doi: 10.5281/zenodo.5534163
description: {"references": ["https://www.biorxiv.org/content/10.1101/2021.09.30.462010v1", "https://doi.org/10.5281/zenodo.5534162"]}
DOI: 10.5281/zenodo.6611123
title: Poicephalus rufiventris decontaminated gx

description: .
DOI: 10.5281/zenodo.6611122
title: Poicephalus rufiventris decontaminated gx

description: .
DOI: 10.5281/zenodo.6564350
title: Data from: Photoinactivation of Yeast and Biofilm Communities of Candida albicans Mediated by ZnTnHex-2-PyP4+ Porphyrin

description: Data supporting the figures presented in the research article Photoinactivation of Yeast and Biofilm Communities of <em>Candida albicans</em> Mediated by ZnTnHex-2-PyP<sup>4+</sup> Porphyrin. <em>Candida albicans</em> is the main cause of superficial candidiasis. While the antifungals available are defied by biofilm formation and resistance emergence, antimicrobial photodynamic inactivation (aPDI) arises as an alternative antifungal therapy. The tetracationic metalloporphyrin Zn(II) <em>meso</em>-tetrakis(<em>N</em>-n-hexylpyridinium-2-yl)porphyrin (ZnTnHex-2-PyP<sup>4+</sup>) has high photoefficiency and improved cellular interactions. We investigated the ZnTnHex-2-PyP<sup>4+</sup> as a photosensitizer (PS) to photoinactivate yeasts and biofilms of <em>C. albicans</em> strains (ATCC 10231 and ATCC 90028) using a blue light-emitting diode. The photoinactivation of yeasts was evaluated by quantifying the colony forming units. The aPDI of ATCC 90028 biofilms was assessed by the MTT assays, propidium iodide (PI) labeling, and scanning electron microscopy. Mammalian cytotoxicity was investigated in Vero cells using MTT assay. The aPDI (4.3 J/cm<sup>2</sup>) promoted eradication of yeasts at 0.8 and 1.5 µM of PS for ATCC 10231 and ATCC 90028, respectively. At 0.8 µM and same light dose, aPDI-treated biofilms showed intense PI labeling, about 89% decrease in the cell viability, and structural alterations with reduced hyphae. No considerable toxicity was observed in mammalian cells. Our results introduce the ZnTnHex-2-PyP<sup>4+</sup> as a promising PS to photoinactivate both yeasts and biofilms of <em>C. albicans</em>, stimulating studies with other <em>Candida </em>species and resistant isolates.
description: This research was funded by the Wellcome Trust, grant 219677/Z/19/Z; Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq, 424159/2018-0 and 406450/2021-8); Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco (FACEPE, APQ-0573-2.09/18); and Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP, n° 2018/20226-7). This study is also associated with the Instituto Nacional de Ciência e Tecnologia em Fotônica (INCT-INFo).
DOI: 10.5281/zenodo.6564349
title: Data from: Photoinactivation of Yeast and Biofilm Communities of Candida albicans Mediated by ZnTnHex-2-PyP4+ Porphyrin

description: Data supporting the figures presented in the research article Photoinactivation of Yeast and Biofilm Communities of <em>Candida albicans</em> Mediated by ZnTnHex-2-PyP<sup>4+</sup> Porphyrin. <em>Candida albicans</em> is the main cause of superficial candidiasis. While the antifungals available are defied by biofilm formation and resistance emergence, antimicrobial photodynamic inactivation (aPDI) arises as an alternative antifungal therapy. The tetracationic metalloporphyrin Zn(II) <em>meso</em>-tetrakis(<em>N</em>-n-hexylpyridinium-2-yl)porphyrin (ZnTnHex-2-PyP<sup>4+</sup>) has high photoefficiency and improved cellular interactions. We investigated the ZnTnHex-2-PyP<sup>4+</sup> as a photosensitizer (PS) to photoinactivate yeasts and biofilms of <em>C. albicans</em> strains (ATCC 10231 and ATCC 90028) using a blue light-emitting diode. The photoinactivation of yeasts was evaluated by quantifying the colony forming units. The aPDI of ATCC 90028 biofilms was assessed by the MTT assays, propidium iodide (PI) labeling, and scanning electron microscopy. Mammalian cytotoxicity was investigated in Vero cells using MTT assay. The aPDI (4.3 J/cm<sup>2</sup>) promoted eradication of yeasts at 0.8 and 1.5 µM of PS for ATCC 10231 and ATCC 90028, respectively. At 0.8 µM and same light dose, aPDI-treated biofilms showed intense PI labeling, about 89% decrease in the cell viability, and structural alterations with reduced hyphae. No considerable toxicity was observed in mammalian cells. Our results introduce the ZnTnHex-2-PyP<sup>4+</sup> as a promising PS to photoinactivate both yeasts and biofilms of <em>C. albicans</em>, stimulating studies with other <em>Candida </em>species and resistant isolates.
description: This research was funded by the Wellcome Trust, grant 219677/Z/19/Z; Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq, 424159/2018-0 and 406450/2021-8); Fundação de Amparo à Ciência e Tecnologia do Estado de Pernambuco (FACEPE, APQ-0573-2.09/18); and Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP, n° 2018/20226-7). This study is also associated with the Instituto Nacional de Ciência e Tecnologia em Fotônica (INCT-INFo).
DOI: 10.6084/m9.figshare.17182985.v1
title: A bankfull geometry dataset for major exorheic rivers on the Qinghai-Tibet Plateau

description: Based on the Sentinel-2 and Landsat 5/7/8 multispectral instrument imageries combined with in-situ measured hydrological data, bankfull river geometry of six major exorheic river basins of the Qinghai-Tibet Plateau (the upper Yellow River, upper Jinsha River, Yalong River, Lantsang River, Nu River and Yalung Zangbo River) are presented. River surface of six mainstreams and major tributaries are included. For each river basin, two types of rivers are included: connected and disconnected rivers. Format of the dataset is .shp exported from the ArcGIS 10.5.
DOI: 10.6084/m9.figshare.17182985.v2
title: A bankfull geometry dataset for major exorheic rivers on the Qinghai-Tibet Plateau

description: Based on the Sentinel-2 and Landsat 5/7/8 multispectral instrument imageries combined with in-situ measured hydrological data, bankfull river geometry of six major exorheic river basins of the Qinghai-Tibet Plateau (the upper Yellow River, upper Jinsha River, Yalong River, Lantsang River, Nu River and Yalung Zangbo River) are presented. River surface of six mainstreams and major tributaries are included. For each river basin, two types of rivers are included: connected and disconnected rivers. Format of the dataset is .shp exported from the ArcGIS 10.5.
DOI: 10.23729/e86df44b-8dad-44e5-89f3-4bea0d3d1236
title: Subset of the MIRACLE emCCD all-sky camera data at 427.8nm from ABK and KIL on 18 Feb 2018 00-02UT

description: This is subset of the data from MIRACLE emCCD all-sky imagers operated in bi-static mode at Abisko and Kilpisjärvi. The subset includes raw images taken with 427.8nm filter. The emCCD imagers were in specific BLUE2 mode taking images every 2s trough 427.8nm narrow band filter with exposure of 1000ms. The images are stored in PNG format and the metadata of the imager are in EXIF fields of the images. This data set is used in the paper "Reconstruction of precipitating electrons and three-dimensional structure of a pulsating auroral patch from monochromatic auroral images obtained from multiple observation points" by M. Fukizawa et al. submitted to Annales Geophysicae, 2022 ( https://doi.org/10.5194/angeo-2022-5) The Abisko imager at the Abisko Scientific Research Station of Swedish Polar Research Secretariat is owned and operated by Sodankylä Geophysical Observatory, University of Oulu. The Kilpisjärvi emCCD imager at Kilpisjärvi Biological station of University of Helsinki is owned and operated by Finnish Meteorological institute. The dataset includes image orientation calibrations made by FMI and by the author. More details about MIRACLE and the emCCD imagers see: https://space.fmi.fi/MIRACLE/ASC/index.php
DOI: 10.6084/m9.figshare.19984205.v1
title: Supplementary Table 1.pdfCross-species transmission of bat coronaviruses in the Americas: contrasting patterns between alphacoronavirus and betacoronavirus.

description: Supplementary Table 1. List of CoV sequences used in this study. Genbank accession numbers, host species, country, isolation date, host family, CoV genus, and RdRp sequence length are indicated for 128 alphaCoV sequences, 17 betaCoV sequences, and 66 additional reference sequences.<br>Supplementary Table 2. List of Cyt b sequences used for inferring bat phylogenies. Bat species and Genbank accession numbers for representative sequences of 22 (alphaCoV) and 7 (beta CoV) hosts are shown.
DOI: 10.6084/m9.figshare.19984208
title: Supplementary Table 2.pdfCross-species transmission of bat coronaviruses in the Americas: contrasting patterns between alphacoronavirus and betacoronavirus.

description: Supplementary Table 1. List of CoV sequences used in this study. Genbank accession numbers, host species, country, isolation date, host family, CoV genus, and RdRp sequence length are indicated for 128 alphaCoV sequences, 17 betaCoV sequences, and 66 additional reference sequences.<br>Supplementary Table 2. List of Cyt b sequences used for inferring bat phylogenies. Bat species and Genbank accession numbers for representative sequences of 22 (alphaCoV) and 7 (beta CoV) hosts are shown.
DOI: 10.6084/m9.figshare.19984208.v1
title: Supplementary Table 2.pdfCross-species transmission of bat coronaviruses in the Americas: contrasting patterns between alphacoronavirus and betacoronavirus.

description: Supplementary Table 1. List of CoV sequences used in this study. Genbank accession numbers, host species, country, isolation date, host family, CoV genus, and RdRp sequence length are indicated for 128 alphaCoV sequences, 17 betaCoV sequences, and 66 additional reference sequences.<br>Supplementary Table 2. List of Cyt b sequences used for inferring bat phylogenies. Bat species and Genbank accession numbers for representative sequences of 22 (alphaCoV) and 7 (beta CoV) hosts are shown.
DOI: 10.6084/m9.figshare.19984205
title: Supplementary Table 1.pdfCross-species transmission of bat coronaviruses in the Americas: contrasting patterns between alphacoronavirus and betacoronavirus.

description: Supplementary Table 1. List of CoV sequences used in this study. Genbank accession numbers, host species, country, isolation date, host family, CoV genus, and RdRp sequence length are indicated for 128 alphaCoV sequences, 17 betaCoV sequences, and 66 additional reference sequences.<br>Supplementary Table 2. List of Cyt b sequences used for inferring bat phylogenies. Bat species and Genbank accession numbers for representative sequences of 22 (alphaCoV) and 7 (beta CoV) hosts are shown.
DOI: 10.6084/m9.figshare.19984408
title: Evaluation and physiotherapeutic intervention in older with deficit balance through the Scale of Berg and Wii Balance Board platform

description: Introduction The aging process causes structural and functional changes in the organism. Among these changes, the systems responsible for controlling the balance are also affected, especially in women. This study aims to perform an assessment and physiotherapy intervention in elderly with balance deficits through Berg scale and platform Wii Balance Board. Materials and methods The study was longitudinal quasi-experimental intervention. Held in the city of Passo Fundo, RS - Brazil. Participants were 38 elderly women who had a deficit balance. The instruments used to collect data was a questionnaire to identify, assess balance across the Berg Balance Scale and an intervention program with six games via the Wii Balance Board™ platform. To statistically analyze the effects before and after the intervention were used Wilcoxon and Pearson correlation, with a significance level of p = 0.05. Results In the present study, we observed a statistically significant improvement in the balance of elderly compared before and after intervention, moreover, the six games played also showed statistical significance when comparing the first and twentieth session, highlighting the games Tightrope Walk Table Tilt, Deep Breathing and Soccer Heading. Conclusion The evaluation and balance training with the platform Wii Balance Board were able to provide significant results for the elderly, besides, the game has the potential to treat the health, well-being and functional capacity of older people through the visual representation the game in real time.
DOI: 10.6084/m9.figshare.19984408.v1
title: Evaluation and physiotherapeutic intervention in older with deficit balance through the Scale of Berg and Wii Balance Board platform

description: Introduction The aging process causes structural and functional changes in the organism. Among these changes, the systems responsible for controlling the balance are also affected, especially in women. This study aims to perform an assessment and physiotherapy intervention in elderly with balance deficits through Berg scale and platform Wii Balance Board. Materials and methods The study was longitudinal quasi-experimental intervention. Held in the city of Passo Fundo, RS - Brazil. Participants were 38 elderly women who had a deficit balance. The instruments used to collect data was a questionnaire to identify, assess balance across the Berg Balance Scale and an intervention program with six games via the Wii Balance Board™ platform. To statistically analyze the effects before and after the intervention were used Wilcoxon and Pearson correlation, with a significance level of p = 0.05. Results In the present study, we observed a statistically significant improvement in the balance of elderly compared before and after intervention, moreover, the six games played also showed statistical significance when comparing the first and twentieth session, highlighting the games Tightrope Walk Table Tilt, Deep Breathing and Soccer Heading. Conclusion The evaluation and balance training with the platform Wii Balance Board were able to provide significant results for the elderly, besides, the game has the potential to treat the health, well-being and functional capacity of older people through the visual representation the game in real time.