cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.auxysu
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Kryptolebias brasiliensis (Valenciennes, 1821), Kryptolebias gracilis Costa, 2007)"
 ]
}

 The dataset includes 65 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000485-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u44ngb
title: Occurrence Download

description: A dataset containing 192 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poospiza thoracica (Nordmann, 1835)"
 ]
}

 The dataset includes 192 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003358-150811131857512/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.znn2a3
title: Occurrence Download

description: A dataset containing 10837 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Colección de Insectos de la Universidad del Quindío"
 ]
}

 The dataset includes 10837 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046192-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1ptprn
title: Occurrence Download

description: A dataset containing 114415 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anas querquedula Linnaeus, 1758"
 ]
}

 The dataset includes 114415 records from 303 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003358-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8yhy3
title: Occurrence Download

description: A dataset containing 823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Monitoreo y seguimiento de fauna terrestre para el AID y AII de la Central Hidroeléctrica de Calima - 2017"
 ]
}

 The dataset includes 823 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046208-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rk4n5h
title: Occurrence Download

description: A dataset containing 2017 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kalanchoe pinnata (Lam.) Pers."
 ]
}

 The dataset includes 2017 records from 143 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003358-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.naq5rw
title: Occurrence Download

description: A dataset listing the 6 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lates niloticus (Linnaeus, 1758)"
 ]
}

 The dataset's 6 records were derived from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046205-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bge9fx
title: Occurrence Download

description: A dataset containing 80069 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Geometry POLYGON((-93.724365 16.214674,-93.724365 14.997851,-92.406005 14.997851,-92.406005 16.214674,-93.724365 16.214674))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 80069 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003358-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rb7hwf
title: Occurrence Download

description: A dataset containing 15205 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mikania micrantha Kunth"
 ]
}

 The dataset includes 15205 records from 374 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048704-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26651163
title: Additional file 8 of Characterization of MicroRNA expression profiles in the ovarian tissue of goats during the sexual maturity period

description: Additional file 8: Supplementary Table 8.
DOI: 10.6084/m9.figshare.26651163.v1
title: Additional file 8 of Characterization of MicroRNA expression profiles in the ovarian tissue of goats during the sexual maturity period

description: Additional file 8: Supplementary Table 8.
DOI: 10.6084/m9.figshare.26651166
title: Additional file 9 of Characterization of MicroRNA expression profiles in the ovarian tissue of goats during the sexual maturity period

description: Additional file 9: Supplementary Table 9.
DOI: 10.6084/m9.figshare.26651166.v1
title: Additional file 9 of Characterization of MicroRNA expression profiles in the ovarian tissue of goats during the sexual maturity period

description: Additional file 9: Supplementary Table 9.
DOI: 10.6084/m9.figshare.26651169
title: Additional file 10 of Characterization of MicroRNA expression profiles in the ovarian tissue of goats during the sexual maturity period

description: Additional file 10: Supplementary Table 10. Expression fold change and p-value of DE miRNAs in RNA-Seq.
DOI: 10.6084/m9.figshare.26651169.v1
title: Additional file 10 of Characterization of MicroRNA expression profiles in the ovarian tissue of goats during the sexual maturity period

description: Additional file 10: Supplementary Table 10. Expression fold change and p-value of DE miRNAs in RNA-Seq.
DOI: 10.1594/pangaea.801625
title: (Table 3) Sand composition at DSDP Site 87-582
DOI: 10.1594/pangaea.802130
title: (Appendix B) Visual composition and atomic ratio at DSDP Site 87-582, 87-583 and 87-584

description: Sediment depth is given in mbsf. Blanks indicate not detected.
DOI: 10.1594/pangaea.806340
title: (Table 2) Trace-element compositions for basalts at DSDP Leg 82 Holes

description: Sediment depth is given in mbsf. Investigator codes are: BOG = H. Bougault, IFREMER (doi:10.2973/dsdp.proc.82.123.1985); BT — E. Bonatti, Lamont-Doherty Geological Observatory of Columbia University (doi:10.2973/dsdp.proc.82.129.1985); DT = L.V. Dmitriev, Vernadsky Institute of Geochemistry, USSR Academy of Sciences (doi:10.2973/dsdp.proc.82.127.1985); DRA = N. Drake, Department of Geology, University of Massachusetts (doi:10.2973/dsdp.proc.82.120.1985); JCB = J.C. Brannon, Department of Earth and Planetary Sciences, Washington University in St. Louis (doi:10.2973/dsdp.proc.82.121.1985); PUC = H. Puchelt, Institut fur Petrologie und Geochemie der Universitat Karlsruhe; SHM = H.-U. Schmincke, Ruhr Universitat Bochum, Mineralogisches Institut; WEA = B.L. Weaver, Department of Geology, University of Leicester (present address: School of Geology and Geophysics, University of Oklahoma, Norman, Oklahoma 73019) (doi:10.2973/dsdp.proc.82.119.1985).
DOI: 10.1594/pangaea.716558
title: Hydrochemistry measured on water bottle samples during VALDIVIA cruise VA53
DOI: 10.1594/pangaea.745785
title: Oceanography during HUDSON curise HUD73/3
DOI: 10.1594/pangaea.756621
title: Chlorophyll a and phaeopigments in surface water during Professor Vodyanitskiy cruise PV29

description: Chlorophyll a and phaeopigments where measured fluorometrically by use of laboratory fluorometer constracted on the base of spectrophotometer Specol, fitted with a red sensitive photomultiplier, blue lamp, blue filter and red filter. Accuracy: lower limit = 0.01 mg/m**3 and the error of Chl and Phaeo determination is 10-15% (calculated from 10-15 repeatings).
DOI: 10.1594/pangaea.744462
title: Physical oceanography during Walther Herwig III cruise WH192/2 to the North Sea
DOI: 10.1594/pangaea.804535
title: (Table 1) Porosity, particle diameter, ATP content and carbon and nitrogen composition of ODP Site 164-994 sediments

description: Sediment samples were obtained for detailed Adenosine 5'-Triphosphate (ATP) analysis down to 57.8 m below the seafloor (mbsf). The samples were also analyzed for particle-size distribution, calcium carbonate (CaCO3), organic carbon, and total nitrogen. The concentrations of ATP ranged between 360 and 7050 pg/g (dry weight sediment), which agree well with a limited number of direct bacteria counts. Principal component analyses show that 63% of the total variance can be accounted for by the first two principal components. The concentration of ATP (bacterial numbers by inference) is virtually independent of the concentration of sedimentary organic carbon, but correlates with CaCO3 and coarse particles.
description: Supplement to: Egeberg, Per Kristian (2000): Adenosine 5'-Triphosphate (ATP) as a proxy for bacteria numbers in deep-sea sediments and correlation with geochemical parameters (Site 994). In: Paull, CK; Matsumoto, R; Wallace, PJ; Dillon, WP (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 164, 1-6
DOI: 10.1594/pangaea.791071
title: (Table 1) Description and mineralogy of veins from DSDP Holes 92-597B and 92-597C
DOI: 10.6084/m9.figshare.24770288
title: Additional file 1 of Novel in silico screening system for plant defense activators using deep learning-based prediction of reactive oxygen species accumulation

description: Additional file 1: Table S1. ROS and chemical features data of the library.
DOI: 10.6084/m9.figshare.24770288.v1
title: Additional file 1 of Novel in silico screening system for plant defense activators using deep learning-based prediction of reactive oxygen species accumulation

description: Additional file 1: Table S1. ROS and chemical features data of the library.
DOI: 10.6084/m9.figshare.24770704
title: Additional file 2 of Novel in silico screening system for plant defense activators using deep learning-based prediction of reactive oxygen species accumulation

description: Additional file 2: Table S2. The ROS peak height and time of Fig. 8a.
DOI: 10.6084/m9.figshare.24770704.v1
title: Additional file 2 of Novel in silico screening system for plant defense activators using deep learning-based prediction of reactive oxygen species accumulation

description: Additional file 2: Table S2. The ROS peak height and time of Fig. 8a.
DOI: 10.1594/pangaea.743479
title: (Table 1) Whole-rock analyses of ODP Site 103-639 rhyolites

description: MgO is not detected. All iron is reported as ferrous iron.
DOI: 10.6084/m9.figshare.24779359
title: Additional file 2 of Turnover of strain-level diversity modulates functional traits in the honeybee gut microbiome between nurses and foragers

description: Additional file 2: Table S1. Sample collection information. Table S2. Table of all strain genomes included in the reference database, their Species/SDP abbreviation used in this study, their corresponding full species name (if existing) and the host where they were isolated. Genomes used as representative in the reduced database are marked by ‘y’ in the last column. Table S3. Proportions of reads mapping to species isolated in non-A. mellifera hosts. The proportions are computed as the number of reads mapping to the species, divided by the number of reads mapping to the same phylotype for this sample.Table S4. Table of differentially abundant orthogroups showing which behavioral state they were enriched in along with the associated fold-change, p-values, their COG category and functional annotation. Table S5. Matrix of the counts of the OGs annotated as H category significantly enriched in the forager samples compared to the al OGs and all COG categories.
DOI: 10.6084/m9.figshare.26742116
title: Additional file 5 of Biallelic variants in SLC26A2 cause multiple epiphyseal dysplasia-4 by disturbing chondrocyte homeostasis

description: Additional file 5: Table S4. Pathogenicity prediction of two variants using bioinformatics tools.
DOI: 10.6084/m9.figshare.26742119
title: Additional file 6 of Biallelic variants in SLC26A2 cause multiple epiphyseal dysplasia-4 by disturbing chondrocyte homeostasis

description: Additional file 6: Table S5. List of SLCA26A2 variants in this study and reported in the literatures.
DOI: 10.6084/m9.figshare.24779359.v1
title: Additional file 2 of Turnover of strain-level diversity modulates functional traits in the honeybee gut microbiome between nurses and foragers

description: Additional file 2: Table S1. Sample collection information. Table S2. Table of all strain genomes included in the reference database, their Species/SDP abbreviation used in this study, their corresponding full species name (if existing) and the host where they were isolated. Genomes used as representative in the reduced database are marked by ‘y’ in the last column. Table S3. Proportions of reads mapping to species isolated in non-A. mellifera hosts. The proportions are computed as the number of reads mapping to the species, divided by the number of reads mapping to the same phylotype for this sample.Table S4. Table of differentially abundant orthogroups showing which behavioral state they were enriched in along with the associated fold-change, p-values, their COG category and functional annotation. Table S5. Matrix of the counts of the OGs annotated as H category significantly enriched in the forager samples compared to the al OGs and all COG categories.
DOI: 10.6084/m9.figshare.24779187.v1
title: Additional file 1 of Cotton pedigree genome reveals restriction of cultivar-driven strategy in cotton breeding

description: Additional file 1: Table S1. Summary Statistics about Nanopore Sequencing Reads. Table S2. Statistic About Illumina Short Reads for Genome assembly. Table S3. Statistic for Hi-C Reads from 2 Replicates. Table S4. Syntenic Ratios Compared with CRI12. Table S5. Phenotype data of CRI12 pedigree members. Table S6. The summary statistics about Nanopore long reads of 20 CRI12 pedigree members. Table S7. Genomic annotation for pedigree structural variations. Table S8. Transposon Annotation for each SV. Table S9. Basic information about 3 cohorts. Table S10. SRR accession number of 169 samples in Wang_2017 cohort. Table S11. SRR accession number of 145 samples in He_2021 cohort. Table S12. Statistic about functional PAVs. Table S13. Genomic annotation for functional PAVs. Table S14. Functional annotation for genes directly influenced by functional PAVs. Table S15. Transcription abundance of VW-related genes between resistant and susceptible accessions. Table S16. SV-Gene expression-Phenotype triplets underlying non-coding SVs. Table S17. 6 genes in fatty acid elongation pathways. Table S18. Allelic SVs in CRI12 pedigree. Table S19. Regulation networks formed by a pair of allelic deletions. Table S20. Category information about 70 Fusarium wilt resistance segments. Table S21. Category information about fiber-quality segments. Table S22. Chisquare test for fiber-quality segments. Table S23. Source of 195 samples in Wang_2017 cohort. Table S24. Sub-groups in Fusarium wilt resistance-related segments. Table S25. Chisquare test for 4 categories in 2 sub-groups divided from 70 FR segments. Table S26. Distribution of segments in CRI12 pedigree and population with 733 samples. Table S27. Sub-groups in Fiber-quality related segments. Table S28. Genomic annotation about fiber-quality related segments. Table S29. Fingerprint score of 13138 segments. Table S30. Genomic annotation for fingerprint segments in CRI12 pedigree. Table S31. t-test about fiber length of 5 sub-populations in Wang_2017 cohort.
DOI: 10.6084/m9.figshare.24779187
title: Additional file 1 of Cotton pedigree genome reveals restriction of cultivar-driven strategy in cotton breeding

description: Additional file 1: Table S1. Summary Statistics about Nanopore Sequencing Reads. Table S2. Statistic About Illumina Short Reads for Genome assembly. Table S3. Statistic for Hi-C Reads from 2 Replicates. Table S4. Syntenic Ratios Compared with CRI12. Table S5. Phenotype data of CRI12 pedigree members. Table S6. The summary statistics about Nanopore long reads of 20 CRI12 pedigree members. Table S7. Genomic annotation for pedigree structural variations. Table S8. Transposon Annotation for each SV. Table S9. Basic information about 3 cohorts. Table S10. SRR accession number of 169 samples in Wang_2017 cohort. Table S11. SRR accession number of 145 samples in He_2021 cohort. Table S12. Statistic about functional PAVs. Table S13. Genomic annotation for functional PAVs. Table S14. Functional annotation for genes directly influenced by functional PAVs. Table S15. Transcription abundance of VW-related genes between resistant and susceptible accessions. Table S16. SV-Gene expression-Phenotype triplets underlying non-coding SVs. Table S17. 6 genes in fatty acid elongation pathways. Table S18. Allelic SVs in CRI12 pedigree. Table S19. Regulation networks formed by a pair of allelic deletions. Table S20. Category information about 70 Fusarium wilt resistance segments. Table S21. Category information about fiber-quality segments. Table S22. Chisquare test for fiber-quality segments. Table S23. Source of 195 samples in Wang_2017 cohort. Table S24. Sub-groups in Fusarium wilt resistance-related segments. Table S25. Chisquare test for 4 categories in 2 sub-groups divided from 70 FR segments. Table S26. Distribution of segments in CRI12 pedigree and population with 733 samples. Table S27. Sub-groups in Fiber-quality related segments. Table S28. Genomic annotation about fiber-quality related segments. Table S29. Fingerprint score of 13138 segments. Table S30. Genomic annotation for fingerprint segments in CRI12 pedigree. Table S31. t-test about fiber length of 5 sub-populations in Wang_2017 cohort.
DOI: 10.1594/pangaea.775909
title: (Table T1) Silicoflagellate abundance in ODP Site 207-1257 sediments
DOI: 10.1594/pangaea.805660
title: Primary production and bacterial production measured on water bottle samples at time series station BATS in 1989
DOI: 10.1594/pangaea.817718
title: (Table 1) Stratigraphic occurrence of Quaternary diatoms in DSDP Site 87-582

description: Sediment depth is given in mbsf. &lt;1 = presence of taxa. Diatom zone: Pseudoeunotia doliosus.
DOI: 10.1594/pangaea.805630
title: Part of the global DOC versus AOU (dissolved organic carbon/apparent oxygen utilization) data compilation of time series station BATS in 1997

description: compilation by Xose Anton Alvarez-Salgado (mailto:xsalgado@iim.csic.es)
DOI: 10.1594/pangaea.757754
title: (Table 1) Gold concentrations in filtered waters from the Bering Sea and the North Pacific and in fractions separated from them
DOI: 10.1594/pangaea.400883
title: Accompanying wind measurements for bottle data of cruise B2/85 during the MRI-LDEO cooperative study

description: Wind measurements refer to data sets: doi:10.1594/PANGAEA.400818, doi:10.1594/PANGAEA.400819
DOI: 10.1594/pangaea.804913
title: Physical oceanography during L'Atalante cruise EUMELI3
DOI: 10.1594/pangaea.737355
title: (Table 7) Contents of bitumen components eluated by diffrerent solvents in sediments from DSDP Holes 50-415A and 50-416A
DOI: 10.1594/pangaea.776050
title: (Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites

description: Subseafloor sediments harbor over half of all prokaryotic cells on Earth (Whitman et al., 1998). This immense number is calculated from numerous microscopic acridine orange direct counts (AODCs) conducted on sediment cores drilled during the Ocean Drilling Program (ODP) (Parkes et al., 1994, doi:10.1038/371410a0, 2000, doi:10.1007/PL00010971). Because these counts cannot differentiate between living and inactive or even dead cells (Kepner and Pratt, 1994; Morita, 1997), the population size of living microorganisms has recently been enumerated for ODP Leg 201 sediment samples from the equatorial Pacific and the Peru margin using ribosomal ribonucleic acid targeting catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH) (Schippers et al., 2005, doi:10.1038/nature03302). A large fraction of the subseafloor prokaryotes were alive, even in very old (16 Ma) and deep (&gt;400 m) sediments. In this study, black shale samples from the Demerara Rise (Erbacher, Mosher, Malone, et al., 2004, doi:10.2973/odp.proc.ir.207.2004) were analyzed using AODC and CARD-FISH to find out if black shales also harbor microorganisms.
description: Sediment depth is given in mbsf. For prokaryotes and bacteria 0 = not detected. The detection limit was 5 x 10**4 cells/cm**3 for minimum 100 fields of view observed.
description: Supplement to: Schippers, Axel; Neretin, Lev N (2006): Data report: Microbiological AODC and CARD-FISH analysis of black shale samples from the Demerara Rise, ODP Leg 207. In: Mosher, DC; Erbacher, J; Malone, MJ (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 207, 1-6
DOI: 10.1594/pangaea.743847
title: (Table 2) Distribution of selected, stratigraphically useful ichthyoliths in brown clay intervals from DSDP holes

description: ? = broken specimens similar to the subtype, # = similar-appearing specimens. DSDP samples (50 cm**3) that have only bone fragments or are barren of ichthyoliths are samples 118-16-1, 73-80 cm, 119-2-2, 60-64 cm, 119-2-5, 50-56 cm, 119-3-2, 60-66 cm, 119-25-1, 92-99 cm, 119-25-2, 83-90 cm, 119-26-1, 83-90 cm, 119-26-2, 64-71 cm, 119-29-2, 30-37 cm, 119-30-4, 30-37 cm, and 119-30-5, 70-77 cm.
DOI: 10.1594/pangaea.805650
title: Pigments measured on water bottle samples at time series station BATS in 1993
DOI: 10.1594/pangaea.755972
title: Physical oceanography and chlorophyll a in surface water during Akademik Vernadsky cruise AV32
DOI: 10.1594/pangaea.811565
title: Lowered ADCP data during L'ATALANTE cruise ATA_IFMGEOMAR/4

description: Processed lowered ADCP data, 10m resolution.
DOI: 10.1594/pangaea.705306
title: (Table 1) Eocene nannofossil datums of DSDP Site 86-577
DOI: 10.1594/pangaea.780482
title: (Table 11) Al and Nd concentrations from several HH extractions of sediments from the Atlantic Ocean

description: Concentration data for the HH-extractions are normalized to the initial bulk sample weights.
DOI: 10.1594/pangaea.744101
title: Physical oceanography during Anton Dohrn cruise AD_02_1985 to the North Sea
DOI: 10.1594/pangaea.809248
title: (Table S3) Nannofossil datums at DSDP Site 86-577

description: DEPTH, sediment is the old depth [mbsf]. Placement of nannofossil datums for Upper Cretaceous and Lower Paleogene sediment according to composite depth scale and an updated time scale (Westerhold et al., 2008, 2012).
DOI: 10.1594/pangaea.723133
title: (Table 2) Occurrence of Jaramillo subchron in sediment cores from the equatorial Atlantic
DOI: 10.1594/pangaea.400898
title: Accompanying wind measurements for bottle data of cruise B9/83 during the MRI-LDEO cooperative study

description: Wind measurements refer to data sets: doi:10.1594/PANGAEA.400861, doi:10.1594/PANGAEA.400862
DOI: 10.1594/pangaea.789086
title: (Table 6) Proportions of clay minerals at DSDP Holes 93-604 and 93-605
DOI: 10.1594/pangaea.856834
title: Cd/Ca ratios in Globigerina bulloides test of surface sediments
DOI: 10.1594/pangaea.738572
title: (Supplement) Chemical composition of bottom sediments at the Transpacific profile
DOI: 10.1594/pangaea.740013
title: Sulphur hexafluoride (SF6) measured on water bottle samples during POLARSTERN cruise ANT-XVIII/2 (EisenEx)
DOI: 10.1594/pangaea.774803
title: (Appendix B) Benthic foraminifera extinction group species in combined DSDP Hole 33-317B and sediment core KR9912-PC4

description: Sediment depth is given in mbsf. Data of KR9912-PC4 from unpublished study of Kawagata.