cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ubvcum
title: Occurrence Download

description: A dataset containing 10859 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Acer ginnala"
 ]
}

 The dataset includes 10859 records from 273 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063403-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jg9k7j
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Murraya microphylla)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 22 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063405-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17239365
title: sampling point
DOI: 10.5281/zenodo.17299027
title: sampling point
DOI: 10.15468/dl.8hag2t
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gaviiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((90 -90,120 -90,120 -60,90 -60,90 -90))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063407-250920141307145/datasets/export for details.
DOI: 10.15468/dl.jabr2t
title: Occurrence Download

description: A dataset containing 56140 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Podicipediformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-150 60,-120 60,-120 90,-150 90,-150 60))"
 ]
}

 The dataset includes 56140 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063338-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t77wcz
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Sorbus aucuparia xanthocarpa"
 ]
}

 The dataset includes 13 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063406-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qg48v2
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Emmelina monodactyla",
 "Country is Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 52 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063408-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/6657
title: EEG2Speech
DOI: 10.15468/dl.yccza7
title: Occurrence Download

description: A dataset containing 2097 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Pakistan",
 "Year is 2024",
 "InstitutionCode is iNaturalist"
 ]
}

 The dataset includes 2097 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063409-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m34hae
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Tilia flavescens"
 ]
}

 The dataset includes 106 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063411-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mfa8e4
title: Occurrence Download

description: A dataset containing 8120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Specimen)",
 "Country is Colombia",
 "Geometry POLYGON((-74.81857 7.92474,-74.81718 7.81297,-74.806 7.72915,-74.82556 7.6579,-74.82556 7.61599,-74.78923 7.61459,-74.7599 7.62857,-74.74453 7.65511,-74.73754 7.69981,-74.74453 7.74592,-74.7599 7.78364,-74.7599 7.80739,-74.7599 7.8493,-74.76968 7.91356,-74.76968 7.93731,-74.81857 7.92474))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2015-2025"
 ]
}

 The dataset includes 8120 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063412-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dysn6n
title: Occurrence Download

description: A dataset containing 1341 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Mussaenda erythrophylla)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1341 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063414-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29064530
title: Public Raw Data

description: Below are the links for obtaining data, code, and software in EmbSAM:ITK-SNAP-CVE for Windows/Mac/Linux is stored on figshare.ITK-SNAP-CVE's GUI data is available at: https://drive.google.com/file/d/1B2Y7sPk0k6ZJ73X5690b_lMMBPPTh0JD/view?usp=sharing and the name dictionary is https://drive.google.com/file/d/1cM5yH0-HKpkWXhg0eWFqdXanJXciNh3B/view?usp=sharingThe instruction's video for viewing GUI data are as follows: https://youtu.be/XhhtBp1kBAo?si=Q2BjYOulVxjQ7p_k and https://youtu.be/VrzfxgLTXeA?si=shfeB0J3Dn_8irBwFor 7 compressed wild-type embryos, 2 uncompressed wild-type embryos, and 20 RNAi-treated embryos:<br>https://drive.google.com/file/d/1HIFOrZ51F_eN-dybjgZYX4RZrqsnjd7x/view?usp=sharing<br>and<br>https://drive.google.com/drive/folders/1D3vyKu2msSrdHSghHmGV6EGZuUTm5kWv?usp=sharingThe online Colab code for EmbSAM is stored at: https://drive.google.com/file/d/1CA3g2WEhPmwvSzE_QL8wBkd3nD_XWMCE/view?usp=drive_linkThe open-source code for EmbSAM is stored at:<br>https://github.com/CunminZhao/EmbSAM.git<i>System security restrictions on personal computers may sometimes block third-party software. If this occurs with ITK-SNAP-CVE, users can simply consult the official system website </i><i>[</i><i>https://support.apple.com/en-us/102445</i><i>]</i><i> for instructions and grant the necessary permissions. This is a standard and common procedure for running third-party software on personal computers.</i>If you have any questions, please contact Guoye Guan (guanguoye@gmail.com), Cunmin Zhao (zhaocunmin@gmail.com), and Zelin Li (zelinli6-c@my.cityu.edu.hk).
DOI: 10.6084/m9.figshare.29064530.v14
title: Public Raw Data

description: Below are the links for obtaining data, code, and software in EmbSAM:ITK-SNAP-CVE for Windows/Mac/Linux is stored on figshare.ITK-SNAP-CVE's GUI data is available at: https://drive.google.com/file/d/1B2Y7sPk0k6ZJ73X5690b_lMMBPPTh0JD/view?usp=sharing and the name dictionary is https://drive.google.com/file/d/1cM5yH0-HKpkWXhg0eWFqdXanJXciNh3B/view?usp=sharingThe instruction's video for viewing GUI data are as follows: https://youtu.be/XhhtBp1kBAo?si=Q2BjYOulVxjQ7p_k and https://youtu.be/VrzfxgLTXeA?si=shfeB0J3Dn_8irBwFor 7 compressed wild-type embryos, 2 uncompressed wild-type embryos, and 20 RNAi-treated embryos:<br>https://drive.google.com/file/d/1HIFOrZ51F_eN-dybjgZYX4RZrqsnjd7x/view?usp=sharing<br>and<br>https://drive.google.com/drive/folders/1D3vyKu2msSrdHSghHmGV6EGZuUTm5kWv?usp=sharingThe online Colab code for EmbSAM is stored at: https://drive.google.com/file/d/1CA3g2WEhPmwvSzE_QL8wBkd3nD_XWMCE/view?usp=drive_linkThe open-source code for EmbSAM is stored at:<br>https://github.com/CunminZhao/EmbSAM.git<i>System security restrictions on personal computers may sometimes block third-party software. If this occurs with ITK-SNAP-CVE, users can simply consult the official system website </i><i>[</i><i>https://support.apple.com/en-us/102445</i><i>]</i><i> for instructions and grant the necessary permissions. This is a standard and common procedure for running third-party software on personal computers.</i>If you have any questions, please contact Guoye Guan (guanguoye@gmail.com), Cunmin Zhao (zhaocunmin@gmail.com), and Zelin Li (zelinli6-c@my.cityu.edu.hk).
DOI: 10.6084/m9.figshare.29064530.v13
title: Public Raw Data

description: Below are the links for obtaining data, code, and software in EmbSAM:ITK-SNAP-CVE for Windows/Mac/Linux is stored on figshare.ITK-SNAP-CVE's GUI data is available at: https://drive.google.com/file/d/1F_dkQG8ReiW_mh65juWKep2KMCAXuRfR/view?usp=sharingThe instruction's video for viewing GUI data are as follows: https://youtu.be/XhhtBp1kBAo?si=Q2BjYOulVxjQ7p_k and https://youtu.be/VrzfxgLTXeA?si=shfeB0J3Dn_8irBwFor 7 compressed wild-type embryos, 2 uncompressed wild-type embryos, and 20 RNAi-treated embryos:<br>https://drive.google.com/file/d/1HIFOrZ51F_eN-dybjgZYX4RZrqsnjd7x/view?usp=sharing<br>and<br>https://drive.google.com/drive/folders/1D3vyKu2msSrdHSghHmGV6EGZuUTm5kWv?usp=sharingThe online Colab code for EmbSAM is stored at: https://drive.google.com/file/d/1CA3g2WEhPmwvSzE_QL8wBkd3nD_XWMCE/view?usp=drive_linkThe open-source code for EmbSAM is stored at:<br>https://github.com/CunminZhao/EmbSAM.git<i>System security restrictions on personal computers may sometimes block third-party software. If this occurs with ITK-SNAP-CVE, users can simply consult the official system website </i><i>[</i><i>https://support.apple.com/en-us/102445</i><i>]</i><i> for instructions and grant the necessary permissions. This is a standard and common procedure for running third-party software on personal computers.</i>If you have any questions, please contact Guoye Guan (guanguoye@gmail.com), Cunmin Zhao (zhaocunmin@gmail.com), and Zelin Li (zelinli6-c@my.cityu.edu.hk).
DOI: 10.7282/t3kh0qkv
title: Colon Crypt Model 110514 G.nlogo

description: Computer program that simulates human colon cancer initiation, therapy, and prevention. Chemotherapy of heterogeneous and drug resistant early colon cancers can be simulated. Includes interface, code, and detailed information. Useful for in silico experiments directly from the user interface. Illustrates and plots the cell dynamics of stem cells, transient amplifying cells, and differentiated cells. Data can be saved in spreadsheet format for producing graphs or further analysis. It runs on the open-source multi-platform NetLogo application version 4.1.3 or 5.3.1 available at https://ccl.northwestern.edu/netlogo/index.shtml. Described in the following publication: Bravo R, Axelrod D. A calibrated agent-based computer model of stochastic cell dynamics in normal human colon crypts useful for in silico experiments. Theoret Biol Med Model. 2013;10:66-89, http://www.tbiomed.com/content/10/1/66. To download the computer program click on the red link “Download file" to the left.
DOI: 10.15156/bio/sh1215255.10fu
title: SH1215255.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215258.10fu
title: SH1215258.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215259.10fu
title: SH1215259.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215260.10fu
title: SH1215260.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215262.10fu
title: SH1215262.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215263.10fu
title: SH1215263.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215271.10fu
title: SH1215271.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215274.10fu
title: SH1215274.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215275.10fu
title: SH1215275.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215279.10fu
title: SH1215279.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.