cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.11583/dtu.8205095.v2
title: ALEX17 Surface energy balance (SEB) station and WindRASS: surface energy budget along with wind and temperature profiles in the valley

description: The present dataset is part of the Alaiz Experiment-2017 (ALEX17) which contains measurements of a surface energy balance (SEB) station and the RASS-Sodar WindRASS from Scintec, both devices rented from the Catalan Meteorological Service. The instrumentation was in operation from April 2018 to January 2019 at the Zabalegui central site of the experiment, in the middle of the Elorz valley. The SEB station provides the four main terms of the surface energy budget, including turbulent fluxes estimated through the eddy covariance technique. The WindRASS monitors the vertical profiles of wind and virtual temperature from 40 to 400 m above the ground at a vertical resolution of 10 m every 15 minutes. Raw data are also part of the dataset to allow generating post-processed data with a user-defined configuration.
DOI: 10.3535/13p-n0e-dzt
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kx0-7ap-zsh
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m0c-1w7-p76
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zeb-er5-y7f
title: Plantae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n66-twy-97v
title: Manganite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w4b-5dd-y4n
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25403/upresearchdata.12611369.v3
title: Cochlear Spiral Reference Framework (CSRF) v0.1

description: The Cochlear Spiral Reference Framework (CSRF) is a set of coefficients for 6th order polynomial equations to describe the cochlear spirals that are relevant to the construction of three-dimensional person-specific computational models of the cochlea. The polynomials provide references for each of the lateral, medial, superior, inferior, superolateral, inferolateral, medial spiral lamina and lateral spiral lamina spirals for as well as a set of predictor polynomials from which spirals that are obscured on low-resolution clinical images may be derived.<br>The files ReconSummary_?.xls are the reconstruction polynomials for obscured spirals according to taxonomical class (roller coaster = R, intermediate = I, sloping = S) and for the pooled = P data. <br>The file MeanSpirals.xls contains the polynomial description for the cochlear spirals according to the three classes and for the pooled datasets.
DOI: 10.3535/882-6ft-m2v
title: Fluorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q2f-esr-9ht
title: Epidote

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e1y-tp8-h2p
title: Quartz

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fhe-g0c-p2d
title: siliciclastic rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1xx-22q-9vp
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/clq-el2-38e
title: Gabbro

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/kk56gtf9dj
title: Interlinking association between Red-clawed Crab, Perisesarma bidens (De Hann, 1835) and Grey Mangrove, Avicennia marina (Forskk.) Vierh. in Nakti Creek (Gulf of Kachchh), Gujarat, Western India

description: Mangroves are the most productive and biologically important ecosystems of the world, as they provide ecological balance, goods, and services to humans; plays a vital role in nature by nurturing ecological, protection and social services. The main purpose of this study was to establish an interlinking association among mangrove litter, crabs and sediment nutrients to derive inter-dependent effects. For this, Nakti Creek (Gulf of Kachchh), Gujarat, Western India, was selected for a study period of 6 months (January to June, 2014), as it harbors substantial population of Red-Clawed Crab, Perisesarma bidens (PB) and Avicennia marina (AM). The area reflects spatio-temporal heterogeneity of mangrove domains e.g. Dense (DMN), Peripheral (PMN), Sparse (SMN), Scanty (SCMN) and Non-Mangrove (NMN). Before commencement of the study, it was hypothesized that PB enhance the growth of mangrove trees, which was well-substantiated at the end of this study. DMN was highly enriched with pH, Total S, Total N, TOC, TOM and K, compared to other domains, PMN with Salinity, SCMN with Total P, and NMN with Salinity, Ca & Mg. Correlation Coefficient Matrix (r) revealed the strong positive correlation between pH & TOM, Salinity & Ca, Ca & Mg, Mg & Total P, Total S & Total N, Total N & Total P with TOM, and TOC & TOM with K. Tree height was flourished in SMN, SCMN & NMN, GBH in NMN, No. of fallen leaves in SCMN, No. of leaves in crab burrows in PMN, Mean length of leaves in SMN & SCMN, Mena width of leaves in DMN & PMN, and Wet weight of leaves in SCMN. Tree height & K exhibited highest correlation with Mean length of leaves, GBH with No. of fallen leaves, No. of fallen leaves with Wet weight of leaves, No. of leaves in burrows with Mean width of leaves, and Mean length of leaves with Wet weight of leaves. Except Salinity, all parameters exhibited highest correlation with Mean width of leaves. Salinity was strongly correlated with No. of leaves in burrows. PMN harbored maximum no. of crab burrows, and SMN with no. of crabs outside burrows. Number of crab burrows was highly correlated with Total P & Mean width of leaves, and No. of crabs outside burrows with TOC & TOM. The present study would have better perception about interaction between abiotic and biotic factors for efficient management and restoration of dwindling mangrove ecosystem. The authors conclude that the presence of Sesarmid Crabs in mangrove forest is vital for enriching the soil with nutrients by enhancing nutrient cycling by feeding on mangrove plant derivatives and making burrows that make the gas exchanges more easier between soil and atmosphere, and hence, it helps in maintaining the growth of mangroves. As a stepping-stone, more elaborative study on effects of PM on AM and vice-versa, is advised for combating ecological degradation of mangrove ecosystem in future.
DOI: 10.3535/249-85m-wx9
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/djz-2hv-1w7
title: Quartz

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k7r-zf0-l5q
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kql-kyl-xn0
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/jjxmv35jhp
title: Evaluation of anticancer activity of Kaempferol-3-O-β-D- (6″-coumaroyl)-glucopyronoside from Euphorbia Hirta flowers: Isolation, characterization

description: 3.4. Anti-cancer activity
Among the more than a few cancers, hepatocellular carcinoma (HCC) is one of the most frequent and lethal cancers worldwide. It debts for about 90% of all liver most cancers and it represents greater than 4% of all most cancers instances worldwide [15].The isolated Kaempferol-3-O-β-D-(6″-coumaroyl)-glucopyronoside was exhibited average inhibition in HeLa cell lines with GI50 of 100 µg, TGl of >100 and LC50 of >100 respectively, which has illustrated in Fig.6. This study is mainly focused to be to determine the inhibition activities of the flavonoid glycosides of Kaempferol-3-O-β-D-(6″-coumaroyl)-glucopyronoside in HeLa human cancers cell lines. 
3.5 In Silico Molecular Docking analysis of natural flavonoids as anti-cancer agents

The molecular docking intentions had been carried out on Auto Dock-Vina software [16] and as pronounced in literature [17]. The docking protocol expected the same conformation as used to be present in the crystal structure with RMSD value nicely inside the dependable vary of 2A°[18]. Amongst the docked conformations, one which binds properly at the active site was once analyzed for unique interactions in Discovery Studio Visualizer 4.0 software. Molecular docking is a precious method computational chemistry and medicinal chemistry to acutely analyses ligand recognition and it has led to vital breakthroughs in drug discovery and design. Molecular docking methodology explores the binding mode and affinity of a small molecule inside the binding site of the receptor target protein [19]. The docked ligands have been ranked in accordance to their binding affinity in a ligand–receptor complex (Fig. 2). Based on the binding affinities as exhibited by way of the docking research supported with the aid of the in-vitro assays (Table 2.), the contemporary data was give conclusion that the Kaempferol-3-O-β-D-(6″-coumaroyl)-glucopyronoside compound has more affinity with cancer cells.
4.1.1 Structure of target proteins

The most important therapeutic targets for breast cancer taken for the study had been ERα, PR, EGFR, and mTOR. The three-dimensional structures of the following breast cancer target proteins had been availed from protein data bank with the PDB ids: 1DI8, 1XO2 and 2OJ9 respectively. The ligand binds at the active site of the substrate by weak non-covalent 
interactions and these interactions are depicted in Fig. 8. In the ligand protein docking calculations, the most positive conformation for each and every ligand is chosen from 10 conformations.
DOI: 10.3535/28x-d6a-rz0
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/has-4ct-mpf
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v9h-r9d-64x
title: Hematite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/5xfz78zwsr
title: NMR-BASED METABOLOMICS OF KIDNEY (HEK 293T) CELLS CULTURED ON SAM-COATED INDIUM TIN OXIDE (ITO)

description: Human embryonic kidney 293T (HEK 293T) cells have been used in organoid formation and specialized applications within organoid systems; however, they often suffer from loose adherence, which limits their applicability. To improve the HEK 293T cellular adhesion and proliferation and to provide insights into the pathways involved in adhesion, HEK 293T cells were cultured on tissue culture plastic and glass substrates with surfaces modified with various self-assembled monolayers (SAMs). The ITO-MPS SAM-coated substrate gave the most promising improved cell adherence and proliferation results. 1H NMR spectroscopy was used to analyze the metabolomics present in the media with and without ITO-MPS-SAM coated substrates for a period of 120 hours. The confocal microscopy images are consistent with the findings from NMR and provide a visual confirmation of the enhanced cellular environment. The metabolomic analysis yielded thirty metabolites, including two promoters (ATP and glucose-6-phosphate) and three modulators (tyramine, 5-hydroxytryptophan, and acetate) of adhesion, which were only significantly present
on the fifth day of culture.
DOI: 10.3535/y5r-sel-86q
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/ysgfp56btg
title: HONO, NO2, and asthma

description: The association between nitrogen dioxide (NO2) and asthma has been investigated. However, conventional NO2 assays measure nitrous acid (HONO) as NO2. In this trial study, we assessed exposure to indoor HONO and some air pollutants in pediatric asthma patients and examined the association between exposure and asthma symptoms. Indoor HONO and nitric oxide (NO), which are primarily generated by the combustion of certain substances, were significantly associated with asthma attacks in 2010 and 2010-2012. Outdoor NO2 was significantly associated with asthma attacks in 2012 and 2010-2012. In 2010, indoor HONO was strongly correlated with indoor NO than with outdoor NO2. Conversely, in 2012, indoor HONO was strongly correlated with outdoor NO2 and NO than with indoor NO2 and NO. Our results highlight the need for further epidemiological studies of the association between HONO and asthma symptoms using multivariate analyses to examine the role of NO2 in asthma symptoms. This study is a trial epidemiological study targeting five pediatric asthma patients per year (2010–2012) with daily self-reported asthma symptoms. Indoor HONO was collected weekly by active sampling at the subjects’ homes. Indoor NO2, NO, and O3 samples were collected weekly by passive sampling at the subjects’ homes. We used data from the Kishiwada Central Park monitoring station. The weekly concentrations of outdoor pollutants for each subject were calculated from hourly data of the monitoring station according to indoor sampling periods.
DOI: 10.3535/bfw-4s2-hz0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qps-2z4-fgk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w2d-amw-6bm
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cj5-sy3-rvs
title: Selenite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tjh-td9-40t
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qpm-gfg-901
title: Quartz

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/khc-116-jdc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q7y-pbr-b5h
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/20b-sbc-031
title: Sepiolite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rc6-dw9-319
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e3r-3fs-1yd
title: Calcite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ljl-lm9-338
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7n0-k5a-sr3
title: Amphibolite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7q2-tqm-h1t
title: Fluorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20254425.v1
title: C. Tróia (N) and (S) SMRM and SLAMM results

description: The Excel file provides the results of the projection of evolution of C. Tróia (N) and (S) salt marshes (Sado Estuary, Portugal) until the end of the century. Four SLR scenarios are available: IPCC RCP4.5, IPCC RCP8.5, MOD.FC_2b and NOAA Extreme. This results were obtained with SMRM (Simplified Marsh Response Model) and SLAMM (Sea-level Affecting Marsh Model).
DOI: 10.15468/dl.e9cynw
title: Occurrence Download

description: A dataset containing 382 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 "TaxonKey is Cryptostroma corticale (Ellis & Everh.) P.H.Greg. & S.Waller"
 ]
}

 The dataset includes 382 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009585-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/8ng5gf75vw
title: Legacy effect of constant and diurnally oscillating temperatures on soil respiration and microbial community structure.

description: Raw data for the publication 'Legacy effect of constant and diurnally oscillating temperatures on soil respiration and microbial community structure' comprising respiration measurements, soil properties, and phospholipid fatty acid analysis of incubated soils. Abstract: Laboratory incubation studies evaluating the temperature sensitivity of soil respiration often use measurements of respiration taken at a constant incubation temperature from soil that has been pre-incubated at the same constant temperature. However, such constant temperature incubations do not represent the field situation where soils undergo diurnal temperature oscillations. We investigated the effects of constant and diurnally oscillating temperatures on soil respiration and soil microbial community composition. A grassland soil from the UK was either incubated at a constant temperature of 5 ℃, 10 ℃, or 15 ℃, or diurnally oscillated between 5 ℃ and 15 ℃. Soil CO2 flux was measured by temporarily moving incubated soils from each of the abovementioned treatments to 5 ℃, 10 ℃ or 15 ℃, such that soils incubated at each temperature had CO2 flux measured at every temperature. We hypothesised that, irrespective of measurement temperature, CO2 emitted from the 5 ℃ to 15 ℃ oscillating incubation would be most similar to the soil incubated at 10 ℃. The results showed that both incubation and measurement temperatures influence soil respiration. Incubating soil at a temperature oscillating between 5 ℃ and 15 ℃ resulted in significantly greater CO2 flux than constant incubations at 10 ℃ or 5 ℃, but was not significantly different to the 15 ℃ incubation. The greater CO2 flux from soils incubated at 15 ℃, or oscillating between 5 ℃ and 15 ℃, coincided with a depletion of dissolved organic carbon and a shift in the phospholipid fatty acid profile of the soil microbial community, consistent with the thermal adaptation of microbial communities to higher temperatures. However, diurnal temperature oscillation did not significantly alter Q10. Our results suggest that daily maximum temperatures are more important than daily minimum or daily average temperatures when considering the response of soil respiration to warming.
DOI: 10.17632/h5grkr6p32
title: Replication Data for: Accounting for Non-normal Distribution of Input variables and Their Correlations in Robust Optimization

description: ExperimentalData.mat includes the data obtained via tensile tests in three directions from 49 different samples gathered from different coils. These are the raw data used to describe the input to the optimization problem. Principal component analysis is done after subtracting their mean values. OptimizationDOE.mat includes the DOE made by LHS sampling in combined noise and design variable space, SimulationResults.mat includes the finite element simulation results that are performed on DOE points. These data are used to build the Kriging metamodel for optimization using the above-mentioned material data. WindData.mat includes the collected wind data from a weather station described in the manuscript.
DOI: 10.3535/7db-82p-76c
title: Glyptolepis sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hcf-e4b-ptd
title: Lava

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8kz-nyg-ayc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c24-n7y-fyb
title: Sandstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/xxfkvrh6xj
title: Climate and geological change as drivers of Mauritiinae palm biogeography

description: SYNTHESIS - Journal of Biogeography - DOI: 10.1111/jbi.14098

ABSTRACT 

Aim. Forest composition and distribution are determined by a myriad of factors, including climate. As models of tropical rain forest, palms are often used as indicator taxa, particularly the Mauritiinae. We question, what characterises the Mauritiinae pollen in the global fossil record? And when did the Mauritiinae become endemic to South America?

Location. Global tropics.

Taxon. Mauritiinae palms (Arecaceae: Lepidocaryeae).

Methods. Pollen trait data from extinct and extant Mauritiinae pollen was generated from light-, scanning- and transmission electron microscopy. Statistical morphometric analysis was used to define species and their relationships to other Mauritiinae. We also compiled a comprehensive pollen database for extinct and extant Mauritiinae and mapped their global geographical distribution from Late Cretaceous to present, using GBIF and fossil data.

Results. Our morphometric analysis identified 18 species (11 extinct and seven extant), all exhibiting exine indentations, a synapomorphy of the subtribe. The fossil taxa and early divergent extant Lepidocaryum are all monosulcate, whereas the extant Mauritia and Mauritiella species are all monoulcerate. Palaeobiogeographical maps of fossil Mauritiinae pollen occurrences suggest the taxon originated in equatorial Africa during the Cretaceous, and expanded their range to South America, and to India in the Paleocene. Range retraction started in the early Eocene with extirpation from India, and reduction in diversity in Africa culminating at the Eocene–Oligocene Transition (EOT). In contrast, in South America the distribution is maintained, and since the Neogene Mauritiinae palms are mostly restricted to swampy, lowland habitats. 

Main conclusions. Morphometric analysis shows that since their origin Mauritiinae pollen are relatively species poor, and Mauritiidites resembles Lepidocaryum.  We also conclude that the biogeographical history of the Mauriitinae and, by extension, tropical forests was strongly affected by global climatic cooling events. In particular the climate change at the EOT was a fundamental determinant of current tropical forest distribution.

KEYWORDS
Arecaceae, Eocene–Oligocene Transition (EOT), fossil record, global cooling, interplate dispersal, Lepidocaryum, Mauritia, Mauritiella, Neotropics, palynology
DOI: 10.3535/6gg-zyl-pbl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kmx-e90-ygx
title: Amphorichnus papillatus Ralf Männil, 1966

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1004413.v3
title: ATAM README

description: ATAM README
DOI: 10.6084/m9.figshare.27707394.v1
title: Results of ANOVA and Tukey post-hoc test

description: In the present study we aimed at elucidating whether exposure to chronic stress affects expression of cardiac MRs, and influences cardiac structure and function (transthoracic echocardiography), and whether blockade of MRs attenuates the stress-induced changes.
DOI: 10.3535/4mh-e5j-379
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/85d-bke-1sh
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.