cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22605917.v1
title: Additional file 1 of Perturbed gut microbiome and fecal and serum metabolomes are associated with chronic kidney disease severity

description: Additional file 1: Additional Tables 1–10. Additional tables are separated in sheets in a single excel file. The first line in each sheet contains the title of each additional table. Supplementary Table 1. Post-hoc multiple analysis for study population characteristics. Supplementary Table 2. Comparisons of micaobial alpha diversity, beta diversity and taxa in each of the CKD groups with controls. Supplementary Table 3. Spearman correlation analysis between clinical data and CKD severity-specific species. Supplementary Table 4. Significant KO genes of those four metabolism pathways between each of the CKD groups and healthy controls. Supplementary Table 5. All differential fecal metabolites among each of the CKD groups and controls (VIP&gt;1, FDR&lt;0.05). Supplementary Table 6. All differential serum metabolites among each of the CKD groups and controls (VIP&gt;1, FDR&lt;0.05). Supplementary Table 7. Comparison of fecal metabolites related to Arginine and proline metabolism, Arachidonic acid metabolism, Ubiquinone and other terpenoid-quinone biosynthesis and Glutathione metabolism between each of the CKD groups and healthy control group.Statistical analysis was performed by Wilcoxon rank-sum test. Benjamini-Hochberg procedure was employed for the multiple test adjustments. Supplementary Table 8. Comparison of serum metabolites related to Arginine and proline metabolism, Arachidonic acid metabolism, Ubiquinone and other terpenoid-quinone biosynthesis and Glutathione metabolism between each of the CKD groups and healthy control group.Statistical analysis was performed by Wilcoxon rank-sum test. Benjamini-Hochberg procedure was employed for the multiple test adjustments. Supplementary Table 9. Spearman correlation analysis between clinical data and CKD severity-specific metabolites. Supplementary Table10. Performance of random-forest models discriminating CKD patients at different groups from controls based on 100-fold Cross-Validation.
DOI: 10.6084/m9.figshare.22605917
title: Additional file 1 of Perturbed gut microbiome and fecal and serum metabolomes are associated with chronic kidney disease severity

description: Additional file 1: Additional Tables 1–10. Additional tables are separated in sheets in a single excel file. The first line in each sheet contains the title of each additional table. Supplementary Table 1. Post-hoc multiple analysis for study population characteristics. Supplementary Table 2. Comparisons of micaobial alpha diversity, beta diversity and taxa in each of the CKD groups with controls. Supplementary Table 3. Spearman correlation analysis between clinical data and CKD severity-specific species. Supplementary Table 4. Significant KO genes of those four metabolism pathways between each of the CKD groups and healthy controls. Supplementary Table 5. All differential fecal metabolites among each of the CKD groups and controls (VIP&gt;1, FDR&lt;0.05). Supplementary Table 6. All differential serum metabolites among each of the CKD groups and controls (VIP&gt;1, FDR&lt;0.05). Supplementary Table 7. Comparison of fecal metabolites related to Arginine and proline metabolism, Arachidonic acid metabolism, Ubiquinone and other terpenoid-quinone biosynthesis and Glutathione metabolism between each of the CKD groups and healthy control group.Statistical analysis was performed by Wilcoxon rank-sum test. Benjamini-Hochberg procedure was employed for the multiple test adjustments. Supplementary Table 8. Comparison of serum metabolites related to Arginine and proline metabolism, Arachidonic acid metabolism, Ubiquinone and other terpenoid-quinone biosynthesis and Glutathione metabolism between each of the CKD groups and healthy control group.Statistical analysis was performed by Wilcoxon rank-sum test. Benjamini-Hochberg procedure was employed for the multiple test adjustments. Supplementary Table 9. Spearman correlation analysis between clinical data and CKD severity-specific metabolites. Supplementary Table10. Performance of random-forest models discriminating CKD patients at different groups from controls based on 100-fold Cross-Validation.
DOI: 10.6084/m9.figshare.20508743
title: Additional file 5 of Impact of water deficiency on leaf cuticle lipids and gene expression networks in cotton (Gossypium hirsutum L.)

description: Additional file 5: Table S5. Analysis of GO enrichment from the seedling stage and bud stage of XL22.
DOI: 10.6084/m9.figshare.20508737.v1
title: Additional file 3 of Impact of water deficiency on leaf cuticle lipids and gene expression networks in cotton (Gossypium hirsutum L.)

description: Additional file 3: Table S3. Transcriptome sequencing data quality and genome mapping.
DOI: 10.6084/m9.figshare.21557362.v1
title: Additional file 4 of Evolution patterns of NBS genes in the genus Dendrobium and NBS-LRR gene expression in D. officinale by salicylic acid treatment

description: Additional file 4.
DOI: 10.6084/m9.figshare.12644425.v1
title: Additional file 1 of A literature-based approach for curating gene signatures in multifaceted diseases

description: Additional file 1: Table S1. LitLab Gene Retriever output of genes retrieved from PMIDs associated with IBD and mucosal immunity, and IDBU in humans.
DOI: 10.6084/m9.figshare.12644443
title: Additional file 4 of Using metagenomic analysis to assess the effectiveness of oral health promotion interventions in reducing risk for pneumonia among patients with stroke in acute phase: study protocol for a randomized controlled trial

description: Additional file 4. Translator’s certification and Anhui Province Natural Science Foundation Proposal of Funding Project.
DOI: 10.6084/m9.figshare.21557335.v1
title: Additional file 10 of Evolution patterns of NBS genes in the genus Dendrobium and NBS-LRR gene expression in D. officinale by salicylic acid treatment

description: Additional file 10.
DOI: 10.6084/m9.figshare.21557365.v1
title: Additional file 5 of Evolution patterns of NBS genes in the genus Dendrobium and NBS-LRR gene expression in D. officinale by salicylic acid treatment

description: Additional file 5.
DOI: 10.6084/m9.figshare.21557341
title: Additional file 12 of Evolution patterns of NBS genes in the genus Dendrobium and NBS-LRR gene expression in D. officinale by salicylic acid treatment

description: Additional file 12.
DOI: 10.6084/m9.figshare.21557374
title: Additional file 8 of Evolution patterns of NBS genes in the genus Dendrobium and NBS-LRR gene expression in D. officinale by salicylic acid treatment

description: Additional file 8.
DOI: 10.6084/m9.figshare.21557359.v1
title: Additional file 3 of Evolution patterns of NBS genes in the genus Dendrobium and NBS-LRR gene expression in D. officinale by salicylic acid treatment

description: Additional file 3.
DOI: 10.6084/m9.figshare.21557374.v1
title: Additional file 8 of Evolution patterns of NBS genes in the genus Dendrobium and NBS-LRR gene expression in D. officinale by salicylic acid treatment

description: Additional file 8.
DOI: 10.6084/m9.figshare.21557413
title: Additional file 20 of Gut microbiota is associated with the effect of photoperiod on seasonal breeding in male Brandt’s voles (Lasiopodomys brandtii)

description: Additional file 20. Photoperiod experiment and FMT experiment_data.
DOI: 10.6084/m9.figshare.22602361.v1
title: Additional file 1 of Proteomic analysis of protein lysine 2-hydroxyisobutyrylation (Khib) in soybean leaves

description: Additional file 1: Fig. S1. The bubble chart shows the GO enrichment analysesof Khib-modifiedproteins in soybean leaves. Fig. S2. Thebubble chart shows the enrichment of KEGG pathway of Khib-modifiedproteins in soybean leaves. Fig. S3. Representative pathway mapsof Khib-modified proteins. (A) Khib-modified proteins in central carbon metabolism, includingpentose phosphate pathway and oxidative phosphorylation. (B) Khib-modifiedproteins in carbon fixation in photosynthetic organisms. (C) Khib-modifiedproteins in fatty acid biosynthesis. The identified Khib-modifiedproteins are indicated in boxes with a red background. Fig. S4. The global PPI network ofidentified Khib-modified proteins in soybean leaves. Table S1. All identified Khib sites and proteins that overlap in three replicates in soybean leaves. Table S2. GO functional classification of Khib-modified proteins in soybean leaves. Table S3. Subcellular localization distribution of Khib-modified proteins in soybean leaves. Table S4. Secondary structure and surface accessibility distribution of Khib-modified peptides in soybean leaves. Table S5. GO enrichment analysis of Khib-modified proteins in soybean leaves. Table S6. KEGG pathway enrichment of Khib-modified proteins in soybean leaves. Table S7. Motif analysis of Khib-modified peptides in soybean leaves. Table S8. The PPI network of Khib-modified proteins in soybean leaves.
DOI: 10.5281/zenodo.10629726
title: Dataset_5

description: This dataset is part of SEJ-601 Research group. You may cite it as: Cambra-Fierro, Jesús J.; Fuentes-Blasco, Maria; Huerta-Álvarez, Rocío; Olavarría-Jaraba, Ana. (2022). “Destination recovery during COVID-19 in an emerging economy: Insights from Perú”, European Research on Management and Business Economics 28 (3), 100188 https://doi.org/10.1016/j.iedeen.2021.100188
DOI: 10.5281/zenodo.10629727
title: Dataset_5

description: This dataset is part of SEJ-601 Research group. You may cite it as: Cambra-Fierro, Jesús J.; Fuentes-Blasco, Maria; Huerta-Álvarez, Rocío; Olavarría-Jaraba, Ana. (2022). “Destination recovery during COVID-19 in an emerging economy: Insights from Perú”, European Research on Management and Business Economics 28 (3), 100188 https://doi.org/10.1016/j.iedeen.2021.100188
DOI: 10.6084/m9.figshare.20508740.v1
title: Additional file 4 of Impact of water deficiency on leaf cuticle lipids and gene expression networks in cotton (Gossypium hirsutum L.)

description: Additional file 4: Table S4. Analysis of GO enrichment for 15,303 common DEGs.
DOI: 10.6084/m9.figshare.12644509.v1
title: Additional file 11 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 11: Table S6. List of some important DEPs related to stress and defense response.
DOI: 10.6084/m9.figshare.20508746.v1
title: Additional file 6 of Impact of water deficiency on leaf cuticle lipids and gene expression networks in cotton (Gossypium hirsutum L.)

description: Additional file 6: Table S6. Analysis of KEGG enrichment of the DEGs.
DOI: 10.6084/m9.figshare.12644484
title: Additional file 1 of Genome analyses provide insights into the evolution and adaptation of the eukaryotic Picophytoplankton Mychonastes homosphaera

description: Additional file 1: Supplementary Table 1. BUSCO forecast statistics. Supplementary Table 2. SSR classification statistics. Supplementary Table 3. List of conserved genes in chloroplast. Supplementary Table 4. List of conserved genes in mitochondria. Supplementary Table 5. carbon meth genes. Supplementary Table 6. Genes involved in nitrogen assimilation up to ammonium. Supplementary Table 7. Thiamine biosynthesis genes. Supplementary Table 8. Lipid metabolic gene comparison. Supplementary Table 9. Starch biosynthesis genes. Supplementary Table 10. non-mevalonate pathway (DXP) genes. Supplementary Table 11. NUMTs List of Mychonastes sp. and other phytoplankton. Supplementary Table 12. NUPTs List of Mychonastes sp. and other phytoplankton. Supplementary Table 13. The versions of major software and database. Supplementary Table 14. Sources of 18S rDNA sequences. Supplementary Table 15. Sources of genomic sequences.
DOI: 10.6084/m9.figshare.12644512.v1
title: Additional file 12 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 12: Table S7. List of some important DEPs related to ion transport.
DOI: 10.6084/m9.figshare.12644518.v1
title: Additional file 14 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 14: Table S9. List of some important DEPs related to phytohormones.
DOI: 10.6084/m9.figshare.16835119
title: Additional file 6 of Transcriptome analysis of Clavibacter michiganensis subsp. michiganensis-infected tomatoes: a role of salicylic acid in the host response

description: Additional file 6: Table S6. GO enrichment analysis at each time point.
DOI: 10.6084/m9.figshare.12644512
title: Additional file 12 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 12: Table S7. List of some important DEPs related to ion transport.
DOI: 10.6084/m9.figshare.12644545
title: Additional file 8 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 8: Table S4. KEGG pathway enrichment of DEPs in ‘DS45 vs DS30’ comparison group.
DOI: 10.6084/m9.figshare.20508743.v1
title: Additional file 5 of Impact of water deficiency on leaf cuticle lipids and gene expression networks in cotton (Gossypium hirsutum L.)

description: Additional file 5: Table S5. Analysis of GO enrichment from the seedling stage and bud stage of XL22.
DOI: 10.6084/m9.figshare.12644509
title: Additional file 11 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 11: Table S6. List of some important DEPs related to stress and defense response.
DOI: 10.6084/m9.figshare.16835107.v1
title: Additional file 2 of Transcriptome analysis of Clavibacter michiganensis subsp. michiganensis-infected tomatoes: a role of salicylic acid in the host response

description: Additional file 2: Table S2. Mean TPM values and correlation coefficient values in samples.
DOI: 10.6084/m9.figshare.21557413.v1
title: Additional file 20 of Gut microbiota is associated with the effect of photoperiod on seasonal breeding in male Brandt’s voles (Lasiopodomys brandtii)

description: Additional file 20. Photoperiod experiment and FMT experiment_data.
DOI: 10.6084/m9.figshare.12644518
title: Additional file 14 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 14: Table S9. List of some important DEPs related to phytohormones.
DOI: 10.6084/m9.figshare.12644536
title: Additional file 5 of Tandem mass tag-based (TMT) quantitative proteomics analysis reveals the response of fine roots to drought stress in cotton (Gossypium hirsutum L.)

description: Additional file 5: Table S2. Common DEPs between ‘DS30 vs CK30’ and ‘DS30 vs CK30’ comparison groups.
DOI: 10.6084/m9.figshare.16835116
title: Additional file 5 of Transcriptome analysis of Clavibacter michiganensis subsp. michiganensis-infected tomatoes: a role of salicylic acid in the host response

description: Additional file 5: Table S5. GO enrichment analysis of upregulated and downregulated DEGs.
DOI: 10.7925/drs1.duchas_4428150
title: Butlerstown (Kilburne)

description: A collection of folklore and local history stories from Butlerstown (Kilburne) (school) (Butlerstown South, Co. Waterford), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher Seán Ó Flannagáin.
description: Lioses and Raths / Power, James -- Famine / Power, James -- Games / Power, James -- Storm / Power, Jackie -- Old Factory / Power, Jackie -- Noted People / Power, Jackie -- Irish Forest Trees / Power, James -- Hidden Crock of Gold / Power, Jackie -- New School / Power, Jackie -- Riddles / Power, Jackie -- Weather Signs / Power, Jackie -- Noted People / Power, Jackie -- Shipwreck / Power, Jackie -- Old Factory / Power, Jackie -- Storm / Power, Jackie -- Old Schools / Power, Jackie -- Marriages / Power, Jackie -- Place Names / Lynch, John -- Cures / Power, Jackie -- Pastimes / Carey, Billy -- Travellers / Power, Jackie -- Lioses and Raths / Power, Jackie -- My Own District / Power, Jackie -- Herbs / Power, Jackie -- Potatoes / Power, Jackie -- Country Today / Power, Jackie -- Feast-Days / Power, Jackie -- Animals of the Farm / Power, Jackie -- Butter-Making / Power, Jackie
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_4428151
title: Baile an Chaisleáin, PortLáirge

description: A collection of folklore and local history stories from Baile an Chaisleáin, PortLáirge (school) (Castletown, Co. Waterford), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher Gobnait Ní Dhuinnín.
description: Folklore - The Wreck of the Sea-Horse / Rockett, Christina -- Games we Play -- Stories of Giants / Power, Gwen -- Local Heroes / Cheasty, Ned -- Old Story / Maher, John -- Local Cures / Rockett, Christina -- Old Story / Power, Gwen -- Old Crafts / Rockett, Christina -- Holy Wells / Fitzgerald, Mary -- Local Heroes / Power, Gwen -- Weather-Lore / Maher, John -- Weather-Lore / Murphy, Annie -- Weather-Lore / Rockett, Christina -- Riddles / Cheasty, Ned -- Riddles / Rockett, Christina -- Local Riddles -- Old Schools / Rockett, Christina -- Hidden Treasure / Rockett, Christina -- Local Marriage Customs / Cheasty, Ned -- Local Marriage Customs / Maher, John -- Local Marriage Customs / Rockett, Christina -- In the Penal Days / Cheasty, Ned -- In the Penal Times / Rockett, Christina -- Local Place Names / Cheasty, Ned -- Local Place Names -- Local Place Names / Rockett, Christina
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_4428152
title: Star of the Sea Convent, Tramore

description: A collection of folklore and local history stories from Star of the Sea Convent, Tramore (school) (Tramore, Co. Waterford), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher Sr. M. Consiglio.
description: Dunhill Castle / Veale, Brigid -- Danes Island / Veale, Brigid -- Sea Horse / Murphy, Maura -- Place Names -- Stories / Bluett, Kitty -- Stories / Bluett, Kitty -- Once upon a time there was a man who was a landlord. / Kirwan, Kitty -- Burrow / Sullivan, Ursula O' -- Sheevra / Phelan, Breda -- Story of Fenor / Malone, Maureen -- Story of the Sheevra / Power, Biddy -- Nicknames -- Customs - Wakes / Giles, Peggy -- Piseoga / Lynch, Kitty -- Piseog / Kirwan, Kitty -- Old Customs -- Tomhasanna / Lynch, Alice -- Tomhasanna -- Ranna -- Lullaby
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_4428154
title: Clochar, Dún Mór

description: A collection of folklore and local history stories from An Clochar, Dún Mór (school) (Dunmore East, Co. Waterford), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher Siúracha na Trócaire..
description: My Home District / Power, Betty -- Rathmoylan / Brien, Kathleen O' -- Weather-Lore / Flynn, Mary -- Old Schools -- Remnants of the Penal Times / Power, Julia -- Local Heroes / Carthy, Biddy Mc -- Shipwreck / Flynn, Mary -- Shipwreck / Long, Mary -- Local Cures / Taylor, Madge -- Local Cures on Certain Days / Taylor, Madge -- Travelling Folk / Taylor, Madge -- Festivity and Customs / Taylor, Madge
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_4428155
title: Pasáiste Thoir (B.), PortLáirge

description: A collection of folklore and local history stories from An Pasáiste Thoir (B.), PortLáirge (school) (Passage East, Co. Waterford), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher Proinnsias Ó Heachthigheirn.
description: Our Local Saint / Aherne, Francis C. -- Local Traditional Stories - Petticoat Loose / Hearne, William -- Alfred de Snow / Ryan, Thomas -- Robin Pottle / Hearne, William -- Halley's Gap / Quigley, Patrick -- Wreck of the Stowel Brown / Barra, Seumas De -- Historical Story / Pepper, Seumas -- St Martin's Day / Ryan, Thomas -- Escape of a Prisoner / Barra, Seumas De -- Fairy Money / Daly, Michael -- Donkey of Ballyhack -- Zebrig / Keating, William -- Hedge-Schoolmaster / Pepper, Seumas -- Donegal / Ryan, Thomas -- Crooke Road / Quigley, Patrick -- Headless Coach / Hearne, William -- Practical Joke / Quigley, Patrick -- Fairy Bush / Daley, Michael -- Weathercock / Barry, James -- Fairy Tale / Pepper, James -- Collection of Riddles / Keating, William -- Multitude of Fish / Barry, James -- Cursed Field / Quigley, Patrick -- Proverbs / Daley, Michael -- Weather-Lore / Pepper, James -- Collection of Riddles / Quigley, Patrick -- Apparition / Pepper, James -- Fairy Pig / Daley, Michael -- Local Cures / Pepper, James -- Old Crafts / Daley, Michael -- Old Crafts / Barry, James -- Old Crafts / Quigley, Patrick / Barry, James -- Old Crafts / Barry, James -- Old Crafts / Hearne, William -- Old Song / Hearne, William -- Old Sayings / Daley, Michael
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5055465
title: Riddles

description: Story collected by Evelyn M. Burke, a student at Mullach Buí school (Castletowncooley, Co. Louth) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Micheál De Búrca.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_5143808
title: Riddles and Amusing Stories

description: Story collected by Peig Ní Ardell, a student at Moneygall (2) school (Moneygall, Co. Offaly) (no informant identified).
description: Collected as part of the Schools' Folklore scheme, 1937-1938, under the supervision of teacher Bean Ní Cháirr.
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.