cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4300166
title: dataset for paper Vanhaebost J, Faouzi M, Mangin P, Michaud K: New reference tables and user-friendly Internet application for predicted heart weights. Int J Legal Med 2014, 128(4):615-620.

description: The heart weight is the most important parameter in the determination of cardiac hypertrophy. The obtained heart weight value should be compared against tables of normal weights by age, gender and body weight and height In the study by Vanhaebost<em> et al</em>. has been shown in the Swiss population that the heart weight increases along with the increase of the body weight, body height, BMI and body surface area (BSA). The mean heart weight is greater in men than in women at a similar body weight. The reference tables for predicted heart weights obtained from this study are presented as an user-friendly internet application (http://calc.chuv.ch/Heartweight) enabling the comparison of heart weights observed at autopsy with the reference values.
DOI: 10.25545/5wd1ob
title: Simulated Mapped Plots Derived from NL Spacing Trials for Sector Subsampling Study

description: The base data were collected from 3 early spacing trials located in western Newfoundland, Canada and established in the early 1980s. The dominant species was balsam fir with minor components of black spruce and white birch. Five spacing treatments were applied in this study areas using a randomized complete block design: control, or no spacing, (S00), 1.2m spacing (S12), 1.8m spacing (S18), 2.4m spacing (S24) and 3.0m spacing (S30). Each treatment was repeated 3 times per site (3×3×5 = 45 PSPs in this study). Treatments were applied to a 0.25 ha block (50m × 50m), and a circular permanent sample plot (PSP) was established near the center of each block. Plot sizes varied so that there were approximately 100 trees per plot following treatment. All trees 1.3 m and taller were identified by species and measured for diameter at breast height (DBH, nearest 0.01cm, BH = 1.3 m) and total height (HT, nearest 0.01 m). PSPs were remeasured at 3 to 5–year intervals but only the last measurements were used here. Stemwood, bark, branch, and foliage biomass (kg) was estimated for each tree using the Canadian national biomass equations. Total above-ground biomass (BM, kg) was estimated by summing these components.
DOI: 10.5281/zenodo.4300238
title: Workflow Trace Archive Galaxy trace

description: Traces from different biomedical research workflows, executed on the public Galaxy server in Europe.
DOI: 10.5281/zenodo.4300237
title: Workflow Trace Archive Galaxy trace

description: Traces from different biomedical research workflows, executed on the public Galaxy server in Europe.
DOI: 10.25545/z8wrbj
title: Acadian Forest Volume Estimates Derived from Airborne LiDAR, Big BAF Sample Plots, and Fixed Area Plots on the Noonan Research Forest

description: The data are located on a 100 m N-S/E-W grid on the 80-ha Femelschlag Research Site on the Noonan Research Forest in New Brunswick, Canada. “Femel_EFI_GTV” contains the gross total volume (GTV; m3ha-1) estimates derived from airborne LiDAR scanning as part of the government of New Brunswick’s Enhanced Forest Inventory program. “Noonan_FemelPlot_GTV” contains the GTV estimates using four different plot types: fixed area plots with all trees measured for height; fixed area plots with 3P subsampling of heights; horizontal point sampling with all trees measured; and big BAF sample plots. The fixed area plots were circular with an 11.28 m radius and all tree 6cm DBH and greater were identified by species and measured for DBH and height. The 3P subsampling was simulated using a Height – Diameter curve as prediction and a target subsample size of 100 trees across the 83 plots. The horizontal point samples used a 2-M BAF angle gauge to select count trees for measurement. All trees 6 cm DBH and greater and considered “in” were identified by species and DBH measured. Heights were imputed using a Height – Diameter curve and the heights measured on the big BAF plots. The big BAF plots had the same plot design as the horizontal point samples and a 27-M BAF angle gauge was used to select trees for height measurement. All four plot types were center of the 100 m grid intersections. Grids do not align with EFI cells because the 100 m grid was established independently and prior to the EFI cells. The X – Y variables are the locations (in m) of the cell center (for Femel_EFI_GTV) and the plot centers (for Noonan_FemelPlot_GTV) with {0,0} being the SW corner of the study area.
DOI: 10.25545/nym13b
title: Applications of big BAF Sampling in Mixed Forests of Atlantic Canada

description: The data are a subsample of an intensification of the 100 m North-South/East-West permanent sampling grid on the Noonan Research Forest. The 100m grid was intensified into a 50m grid. Three grid intersections per stand polygon were randomly selected. If a stand had fewer than 3 intersections, all intersections were selected. The stand polygons were based on the New Brunswick Department of Natural Resources’ Forest Development Survey derived from aerial photography taken in 1999. Horizontal point samples using a 2-M BAF angle gauge were the basis for all tree and plot measurements. The data were collected in summer 2002.
DOI: 10.5525/gla.researchdata.1091
title: Changes in the frequency, experiences and barriers to green space use in the United Kingdom during the COVID-19 pandemic (November 2020 follow-up)

description: The aim of the survey was to be able to explore how the COVID-19 pandemic and restrictions/‘lockdown’ were impacting the UK population’s visits to green space in November 2020 compared to data collected during the initial ‘stay at home’ phase of restrictions in April/May 2020 (http://dx.doi.org/10.5525/gla.researchdata.1038). The survey was conducted using an online interview administered to members of the YouGov Plc UK panel of 800,000+ individuals who agreed to take part in surveys. The survey was completed between 25th - 26th November 2020, with a nationally representative sample of 2,246 respondents. In the survey, respondents were asked about their frequency of green space visits, as well as their experiences within green space and barriers to visiting green space during the current stage of the pandemic and restrictions. Questions on garden access, pet ownership, household size, urban/rural status and long-standing illnesses/health conditions were also included. Demographic data was provided by YouGov (including sex, age, geographic region, ethnicity, social grade, marital status, working status, the number of children in household, government region and social media usage). Please note: The data in this record is under embargo until October 2023.
DOI: 10.6084/m9.figshare.13272845
title: GVCandJobQuality DATA Nov20.xlsx

description: This dataset combines TIVA (2016) data on intermediate input trade with SEA WIOD (2014) data on wages and hours worked by three skill types, to generate a balanced panel dataset for 38 countries from 1995-2011. It allows us to do a 2 step fixed effects estimation that links overall and GVC trade measures with product prices and labor productivity in the first step, and with a range of job quality measures in the second step.
DOI: 10.6084/m9.figshare.13272845.v2
title: GVCandJobQuality DATA Nov20.xlsx

description: This dataset combines TIVA (2016) data on intermediate input trade with SEA WIOD (2014) data on wages and hours worked by three skill types, to generate a balanced panel dataset for 38 countries from 1995-2011. It allows us to do a 2 step fixed effects estimation that links overall and GVC trade measures with product prices and labor productivity in the first step, and with a range of job quality measures in the second step.
DOI: 10.6084/m9.figshare.13272845.v1
title: GVCandJobQuality DATA Nov20.xlsx

description: This dataset combines TIVA (2016) data on intermediate input trade with SEA WIOD (2014) data on wages and hours worked by three skill types, to generate a balanced panel dataset for 38 countries from 1995-2011. It allows us to do a 2 step fixed effects estimation that links overall and GVC trade measures with product prices and labor productivity in the first step, and with a range of job quality measures in the second step.
DOI: 10.5281/zenodo.4300060
title: Magnetic hyperthermia with e-Fe2O3 nanoparticles

description: These data correspond to the figures in the paper: Gu Y. et al. RSC Adv., 2020, 10, 28786–28797. doi:10.1039/d0ra04361c.
DOI: 10.5281/zenodo.4300059
title: Magnetic hyperthermia with e-Fe2O3 nanoparticles

description: These data correspond to the figures in the paper: Gu Y. et al. RSC Adv., 2020, 10, 28786–28797. doi:10.1039/d0ra04361c.
DOI: 10.6084/m9.figshare.12609404
title: Multicriteria Wetland Network

description: The NetworkDataFolder includes a network dataset created to investigate wetland connectivity using a multi-criteria optimization approach. Three arc attributes represent cost associated with movement on the landscape. The digital elevation model is used to compute the topographic wetness index and cost related to elevation change. The landuse/landcover layer is basis for calculating likelihood of successful traversal. The built network consists of 12 wetlands serving as origin and destination, and 1277 network arcs. For each arc there are several arc attributes as described below:<br><br>ID1: reference to arc endpoint at the lower altitudeID2: reference to arc endpoint at the higher altitudeDEM1: elevation at endpoint 1DEM2: elevation at endpoint 2<br>DEMc: elevation at midpoint of arcTWI1: topographic wetness index at endpoint 1TWI2: topographic wetness index at endpoint 2TWIc: topographic wetness index at midpoint of arcLUL1: landuse/landcover type at endpoint 1LUL2: landuse/landcover type at endpoint 2LULc: landuse/landcover type at midpoint of arcLULb: base successful traversal likelihood associated with each landuse/landcover typeLULf: final value of successful traversal likelihood (considering arc length)<br>DIST: arc length in meters<br>The ImplementationScript folder includes two solution approaches to identify Pareto-optimal solutions on the frontier of objective space in our multiobjective optimization model. The exact approach constructs the full efficient set and the approximate approach estimates the supported efficient solutions. The output for two solution methods are available in the PathFolder.
DOI: 10.6084/m9.figshare.12609404.v1
title: Multicriteria Wetland Network

description: The NetworkDataFolder includes a network dataset created to investigate wetland connectivity using a multi-criteria optimization approach. Three arc attributes represent cost associated with movement on the landscape. The digital elevation model is used to compute the topographic wetness index and cost related to elevation change. The landuse/landcover layer is basis for calculating likelihood of successful traversal. The built network consists of 12 wetlands serving as origin and destination, and 1277 network arcs. For each arc there are several arc attributes as described below:<br><br>ID1: reference to arc endpoint at the lower altitudeID2: reference to arc endpoint at the higher altitudeDEM1: elevation at endpoint 1DEM2: elevation at endpoint 2<br>DEMc: elevation at midpoint of arcTWI1: topographic wetness index at endpoint 1TWI2: topographic wetness index at endpoint 2TWIc: topographic wetness index at midpoint of arcLUL1: landuse/landcover type at endpoint 1LUL2: landuse/landcover type at endpoint 2LULc: landuse/landcover type at midpoint of arcLULb: base successful traversal likelihood associated with each landuse/landcover typeLULf: final value of successful traversal likelihood (considering arc length)<br>DIST: arc length in meters<br>The ImplementationScript folder includes two solution approaches to identify Pareto-optimal solutions on the frontier of objective space in our multiobjective optimization model. The exact approach constructs the full efficient set and the approximate approach estimates the supported efficient solutions. The output for two solution methods are available in the PathFolder.
DOI: 10.6084/m9.figshare.13297889
title: Political and Non-Political from Brazilian deputies

description: We collect 3,377,744 public tweets from 914 Brazilian politicians with a valid account on Twitter and who had an office in Congress for at least one year from October 2013 to October 2019. Also, a set of 3,116 tweets was labeled as political and non-political comprising the years from 2013 to 2019.<br>
DOI: 10.6084/m9.figshare.13297889.v2
title: Political and Non-Political from Brazilian deputies

description: We collect 3,377,744 public tweets from 914 Brazilian politicians with a valid account on Twitter and who had an office in Congress for at least one year from October 2013 to October 2019. Also, a set of 3,116 tweets was labeled as political and non-political comprising the years from 2013 to 2019.<br>
DOI: 10.6084/m9.figshare.13297889.v1
title: Political and Non-Political from Brazilian deputies

description: We collect 3,377,744 public tweets from 914 Brazilian politicians with a valid account on Twitter and who had an office in Congress for at least one year from October 2013 to October 2019. Tweets were labeled using the automatic classifier. More details attached article.<br>
DOI: 10.5281/zenodo.4300283
title: Data underlying the research of: "Assimilation of Satellite Soil Moisture Products for River Flow Prediction: An Extensive Experiment over 700 Catchments throughout Europe"

description: This dataset contains the results supporting the findings in the research article "Assimilation of Satellite Soil Moisture Products for River Flow Prediction: An Extensive Experiment over 700 Catchments throughout Europe". For further details please contact: d.desantis@dimes.unical.it
DOI: 10.6084/m9.figshare.13312877
title: Supplementary Material for: Association of <b><i>VEGF</i></b> Gene Family Variants with Central Macular Thickness and Visual Acuity after Aflibercept Short-Term Treatment in Diabetic Patients: A Pilot Study

description: <b><i>Introduction:</i></b> Diabetic retinopathy (DR) is one of the major vision-threatening causes worldwide. Searching for an individualized therapeutic strategy to prevent its progress is challenging. <b><i>Objective:</i></b> This work aimed to investigate the association of angiogenesis-inducer vascular endothelial growth factor (<i>VEGF</i>) gene family and related receptor variants (rs833069, rs12366035, rs7664413, rs7993418, and rs2305948) with susceptibility of DR and the response to 1 dose of aflibercept treatment in type 2 diabetes mellitus (T2DM). <b><i>Methods:</i></b> Consecutive eligible patients with T2DM (<i>n</i> = 125) and 110 unrelated controls were enrolled in this preliminary prospective case-controlled study. Genotyping was identified using TaqMan real-time PCR. Adjusted odds ratio (OR) with 95% confidence interval (CI) was applied to assess the strength of the association with the clinical/ophthalmological characteristics and early response to intravitreal aflibercept treatment in terms of improved visual acuity (BCVA) and central macular thickness (CMT). <b><i>Results:</i></b> We found that both <i>VEGFB</i> rs12366035 and <i>VEGFC</i> rs7664413 conferred higher risk for DR progression under allelic (OR [95% CI]: 1.71 [1.07–2.74]), homozygote comparison (3.55 [1.32–9.57]), and recessive (3.77 [1.43–9.93]) models for the former and under allelic (2.09 [1.25–3.490, homozygote comparison (2.76 [1.02–7.45]), and recessive (2.62 [0.98–6.98] models for the latter. In contrast, <i>VEGFR1</i> rs7993418 conferred protection against DR under heterozygote comparison and dominant models. The rs12366035*T/T genotype showed the worst pretreatment BCVA score (0.35 ± 0.24) compared to other corresponding genotypes (0.66 ± 0.26 in C/T and 0.54 ± 0.25 in C/C carriers) (<i>p</i> = 0.008). Meanwhile, patients with rs7993418*G/G of <i>VEGFR1</i> exhibited a significant reduction in CMT after aflibercept injection (12.26 ± 35.43 µ in G/G vs. 3.57 ± 8.74 µ in A/A) (<i>p</i> = 0.037). <b><i>Conclusions:</i></b> Polymorphisms of the studied <i>VEGF/</i>receptors could be considered as genetic risk factors of DM/DR development and could play an important role in aflibercept early response for DR patients in the study population.
DOI: 10.6084/m9.figshare.13312877.v1
title: Supplementary Material for: Association of <b><i>VEGF</i></b> Gene Family Variants with Central Macular Thickness and Visual Acuity after Aflibercept Short-Term Treatment in Diabetic Patients: A Pilot Study

description: <b><i>Introduction:</i></b> Diabetic retinopathy (DR) is one of the major vision-threatening causes worldwide. Searching for an individualized therapeutic strategy to prevent its progress is challenging. <b><i>Objective:</i></b> This work aimed to investigate the association of angiogenesis-inducer vascular endothelial growth factor (<i>VEGF</i>) gene family and related receptor variants (rs833069, rs12366035, rs7664413, rs7993418, and rs2305948) with susceptibility of DR and the response to 1 dose of aflibercept treatment in type 2 diabetes mellitus (T2DM). <b><i>Methods:</i></b> Consecutive eligible patients with T2DM (<i>n</i> = 125) and 110 unrelated controls were enrolled in this preliminary prospective case-controlled study. Genotyping was identified using TaqMan real-time PCR. Adjusted odds ratio (OR) with 95% confidence interval (CI) was applied to assess the strength of the association with the clinical/ophthalmological characteristics and early response to intravitreal aflibercept treatment in terms of improved visual acuity (BCVA) and central macular thickness (CMT). <b><i>Results:</i></b> We found that both <i>VEGFB</i> rs12366035 and <i>VEGFC</i> rs7664413 conferred higher risk for DR progression under allelic (OR [95% CI]: 1.71 [1.07–2.74]), homozygote comparison (3.55 [1.32–9.57]), and recessive (3.77 [1.43–9.93]) models for the former and under allelic (2.09 [1.25–3.490, homozygote comparison (2.76 [1.02–7.45]), and recessive (2.62 [0.98–6.98] models for the latter. In contrast, <i>VEGFR1</i> rs7993418 conferred protection against DR under heterozygote comparison and dominant models. The rs12366035*T/T genotype showed the worst pretreatment BCVA score (0.35 ± 0.24) compared to other corresponding genotypes (0.66 ± 0.26 in C/T and 0.54 ± 0.25 in C/C carriers) (<i>p</i> = 0.008). Meanwhile, patients with rs7993418*G/G of <i>VEGFR1</i> exhibited a significant reduction in CMT after aflibercept injection (12.26 ± 35.43 µ in G/G vs. 3.57 ± 8.74 µ in A/A) (<i>p</i> = 0.037). <b><i>Conclusions:</i></b> Polymorphisms of the studied <i>VEGF/</i>receptors could be considered as genetic risk factors of DM/DR development and could play an important role in aflibercept early response for DR patients in the study population.
DOI: 10.5281/zenodo.4300289
title: Supporting data for paper "Developing tools to evaluate non-linear mixed effect models: 20 years on the npde adventure"

description: R markdown notebook and associated data used to produce the main figures in the paper "Developing tools to evaluate non-linear mixed effect models: 20 years on the npde adventure", submitted to AAPS Journal, December 2020.
DOI: 10.5281/zenodo.4300119
title: Dataset of trees, insects and forest structure of forests disturbed and undisturbed by elephants on Mount Cameroon

description: Datasets for Maicher et al. Effects of disturbances by forest elephants on diversity of trees and insects in tropical rainforests on Mount Cameroon. <em>Scientific Reports </em>doi: 10.1038/s41598-020-78659-7 All related information can be found in the cited paper. When using the dataset for anything, cite the Maicher et al. <em>Scientific Reports </em>paper. For additional information, refer the paper or write to robert.tropek@gmail.com and vincent.maicher@hotmail.fr
description: {"references": ["Maicher et al.\u00a0Effects of disturbances by forest elephants on diversity of trees and insects in tropical rainforests on Mount Cameroon.\u00a0Scientific Reports\u00a0doi:\u00a010.1038/s41598-020-78659-7"]}
DOI: 10.5281/zenodo.4300118
title: Dataset of trees, insects and forest structure of forests disturbed and undisturbed by elephants on Mount Cameroon

description: Datasets for Maicher et al. Effects of disturbances by forest elephants on diversity of trees and insects in tropical rainforests on Mount Cameroon. <em>Scientific Reports </em>doi: 10.1038/s41598-020-78659-7 All related information can be found in the cited paper. When using the dataset for anything, cite the Maicher et al. <em>Scientific Reports </em>paper. For additional information, refer the paper or write to robert.tropek@gmail.com and vincent.maicher@hotmail.fr
description: {"references": ["Maicher et al.\u00a0Effects of disturbances by forest elephants on diversity of trees and insects in tropical rainforests on Mount Cameroon.\u00a0Scientific Reports\u00a0doi:\u00a010.1038/s41598-020-78659-7"]}
DOI: 10.6084/m9.figshare.12443495.v13
title: The human O-GlcNAcome database

description: This database is a manually curated list of all the <i>O</i>-GlcNAcylated human proteins known to date. For each protein is reported the <i>O</i>-GlcNAc site(s), reference(s) and technique(s) used to determine O-GlcNAc status and sites.Each protein is scored for <i>O</i>-GlcNAcylation based on publications, techniques and identification of sites.The search flowchart is attached.<br><br>
DOI: 10.21227/nzk8-6k24
title: Non Linear Battery

description: This dataset is in support of my planned research paper shortly to be submitted to "IEEE Transactions on Energy Conversion".In this dataset,
DOI: 10.21227/cvv1-ba88
title: Non Linear Battery

description: This dataset is in support of my planned research paper shortly to be submitted to "IEEE Transactions on Energy Conversion".In this dataset,
DOI: 10.6084/m9.figshare.13303139
title: McGrath 2020 Stereocilia barbed ends.xlsx

description: Supplemental
DOI: 10.6084/m9.figshare.13303139.v1
title: McGrath 2020 Stereocilia barbed ends.xlsx

description: Supplemental
DOI: 10.34740/kaggle/dsv/1703907
title: COVID_RS
DOI: 10.21227/j28j-fb93
title: Non Linear Battery

description: This dataset is in support of my planned research paper shortly to be submitted to "IEEE Transactions on Energy Conversion".In this dataset,
DOI: 10.21227/2gx3-5b98
title: Non Linear Battery

description: This dataset is in support of my planned research paper shortly to be submitted to "IEEE Transactions on Energy Conversion".In this dataset,
DOI: 10.6084/m9.figshare.13312856.v1
title: Supplementary table S1: complete dataset, epidemiological informations, genomic quality assessment data and raw reads accession number

description: This table provides, for the 1575 LISTADAPT dataset, all information available dealing with epidemiological data and genome sequence quality.<br>
DOI: 10.25387/g3.13312088
title: Supplemental Material for Demirci et al., 2020

description: Figure S1 contains allele frequency counts for duplications, inversions and deletions. Figure S2 contains clustering of the duplications and melon accessions based on presence/absence of duplications. Figures S3-S5 contain maximum likelihood trees based on duplications, inversions and deletions, respectively. Figure S6 contains a maximum likelihood tree with bootstrap values based on combined SV events. Table S1 contains the details of accessions used in this study including country of origin, accession number, common name and groups and subspecies they belong to. Table S2 contains the presence/absence variation (PAV) of 104 genes in linkage group V in 100 melon accessions. Table S3 contains the overrepresented GO terms in genes overlapping with SV.