cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.dp4rt4sh
title: Data from: Reconstructing the origins of high-alpine niches and cushion life form in the genus Androsace s.l. (Primulaceae)

description: Relatively few species have been able to colonize extremely cold alpine
 environments. We investigate the role played by the cushion life form in
 the evolution of climatic niches in the plant genus Androsace s.l., which
 spreads across the mountain ranges of the Northern Hemisphere. Using
 robust methods that account for phylogenetic uncertainty, intraspecific
 variability of climatic requirements and different life history evolution
 scenarios, we show that climatic niches of Androsace s.l. exhibit low
 phylogenetic signal and that they evolved relatively recently and
 punctually. Models of niche evolution fitted onto phylogenies show that
 the cushion life form has been a key innovation providing the opportunity
 to occupy extremely cold environments, thus contributing to rapid climatic
 niche diversification in the genus Androsace. We then propose a plausible
 scenario for the adaptation of plants to alpine habitats.
description: Clim_GBIF_2-5minExtracted climatic variables for all occurrence points used in the study. The variables are the 19 Bioclim variables, at a 2.5' resolution. Each line corresponds to a site in the corresponding file of occurrences : Rel_flo_GBIF.txtRel_flo_GBIFFloristic table (occurrence points) for all species in the Androsace (s.l.) with coordinates provided by GBIF.org
DOI: 10.15468/dl.g3jpxp
title: Occurrence Download

description: A dataset containing 2188 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Specimen, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Monomorium pharaonis",
 "Year 1000-2025"
 ]
}

 The dataset includes 2188 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001714-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/uz8hza
title: Charles Gardner Shaw Mycological Herbarium, Washington State University

description: The original herbarium of Washington State University was founded in the early 1890's by Charles V. Piper, and the mycological collections were moved into a separate facility in the Plant Pathology Department around 1917 by Frederick D. Heald.  Renamed the Charles Gardner Shaw Mycological Herbarium in 2011, it currently includes nearly 75,000 accessioned specimens.
Important collections include: smuts (G.W. Fischer, R. Duran, L.M. Carris, K. Vanky); downy mildews (C.G. Shaw); powdery mildews (D.A. Glawe); Xylariaceae, Diatrypaceae, and other pyrenomycetes (J. D. Rogers &amp; others); and fungi on grasses (R. Sprague), with a focus on the Northwest United States. Fungal exsiccati of historical Northwest collectors including Suksdorf, Piper, &amp; others are available, as well as original complete sets of Fungi Columbiani (E. &amp; E., Bartholomew) and North American Fungi (Ellis &amp; Everhart). Collections from the USA including Alaska &amp; Hawai'i, Canada, the UK, Austria, Germany, Finland, Romania &amp; E. Europe, Mexico, Brazil, Taiwan &amp; SE Asia, Russia, and New Zealand are also well represented.
DOI: 10.5061/dryad.9s4r4g90
title: Data from: Spatial genetic structure of the mountain pine beetle (Dendroctonus ponderosae) outbreak in western Canada: historical patterns and contemporary dispersal

description: Environmental change has a wide range of ecological consequences,
 including species extinction and range expansion. Many studies have shown
 that insect species respond rapidly to climatic change. A mountain pine
 beetle epidemic of record size in North America has led to unprecedented
 mortality of lodgepole pine, and a significant range expansion to the
 northeast of its historic range. Our goal was to determine the spatial
 genetic variation found among outbreak population from which genetic
 structure, and dispersal patterns may be inferred. Beetles from 49
 sampling locations throughout the outbreak area in western Canada were
 analysed at 13 microsatellite loci. We found significant north-south
 population structure as evidenced by: (i) Bayesian-based analyses, (ii)
 north-south genetic relationships and diversity gradients; and (iii) a
 lack of isolation-by-distance in the northernmost cluster. The north-south
 structure is proposed to have arisen from the processes of postglacial
 colonization as well as recent climate-driven changes in population
 dynamics. Our data support the hypothesis of multiple sources of origin
 for the outbreak and point to the need for population specific information
 to improve our understanding and management of outbreaks. The recent range
 expansion across the Rocky Mountains into the jack/lodgepole hybrid and
 pure jack pine zones of northern Alberta is consistent with a northern
 British Columbia origin. We detected no loss of genetic variability in
 these populations, indicating that the evolutionary potential of mountain
 pine beetle to adapt has not been reduced by founder events. This study
 illustrates a rapid range-wide response to the removal of climatic
 constraints, and the potential for range expansion of a regional
 population.
description: MPB Microsatellite
 data-tabThe file is tab
 delimited. Please see Readme file for more details.
DOI: 10.5061/dryad.8qq3p0d8
title: Data from: Genotype-dependent responses to levels of sibling competition over maternal resources in mice

description: Research on phenotypic plasticity has often focused on how a given
 genotype responds to changing physical environments. However, for many
 species the social environment plays an equally important role due to
 competition for resources. During early development, the level of
 competition for limited resources will often depend critically on the
 number of siblings. Therefore, competition among siblings should drive the
 evolution of genes that allow flexible responses to realized levels of
 competition and maternal resource availability. However, it is unknown
 whether genetically based differences between individuals exist in their
 response to the social environment that affects their future development.
 Using a quantitative trait locus approach in an experimental population of
 mice we demonstrate that effects of sibling number on body weight depend
 on individual genotype at seven loci, over and above the general negative
 litter size effect. Overall, these litter size-by-genotype interactions
 considerably modified the degree to which increasing litter size caused
 reduced weight. For example at one locus this effect leads to a 7%
 difference in body weight at week 7 between individuals experiencing the
 extremes of the normal range of litter sizes in our population (five to
 nine). The observed interaction between genotype and the competitive
 environment can produce differences in body weight that are similar in
 magnitude to the main effect of litter size on weight. Our results show
 that different genotypes respond to the social environment differentially
 and that interaction effects of genotype with litter size can be as
 important as genotype-independent effects of litter size.
description: hager et al Heredity Sib
 competition phenotypeschrom1chrom2chrom3chrom4chrom5chrom6chrom7chrom8chrom9chrom10chrom11chrom12chrom13chrom14chrom15chrom16chrom17chrom18chrom19Read Me Hager et al
DOI: 10.5281/zenodo.18391774
title: Producciones_VOD_España_2020_2024
DOI: 10.5061/dryad.1c1m4qc6
title: Data from: Chromosome number evolves independently of genome size in a clade with non-localized centromeres (Carex: Cyperaceae)

description: The effects of chromosome rearrangement on genome size are poorly
 understood. While chromosome duplications and deletions have predictable
 effects on genome size, chromosome fusion, fission, and translocation do
 not. In this study, we investigate genome size and chromosome number
 evolution in 87 species of Carex, one of the most species-rich genera of
 flowering plants and one that has undergone an exceptionally high rate of
 chromosome rearrangement. Using phylogenetic generalized least squares
 regression, we find that the correlation between chromosome number and
 genome size in the genus grades from flat or weakly positive at fine
 phylogenetic scales to weakly negative at deeper phylogenetic scales. The
 rate of chromosome evolution exhibits a significant increase near the
 crown of a species-rich clade that arose approximately 5 million years
 ago. Genome size evolution, however, demonstrates a nearly constant rate
 across the entire tree. We hypothesize that this decoupling of genome size
 from chromosome number helps explain the high lability of chromosome
 number in the genus, as it reduces indirect selection on chromosome
 number.
description: Chromosome numbers and
 genome sizes in CarexTab-delimted table of
 diploid chromosome numbers and 1C DNA content (in picograms DNA) for 87
 taxa of Carex subgenus Vignea. Chromosome numbers are from literature
 reports and meiotic observations. DNA content is by flow cytometry.
 Details on the data sources are provided in the paper associated with this
 dataset.datJuly2011.txtBEAST XML file for relaxed clock MCMC analysisTrees utilized in this study (a subsample of these trees is included in this submission as a separate data file) were estimated using BEAST v1.5.4. This file is Beast-compliant XML generated in BEAUTi.nrDNAforGLS-020711-Yule-Log.xmlRelaxed clock MCMC analysis, trees subsampleThis file contains 200 trees subsampled from a relaxed-clock MCMC analysis conducted in BEAST (see XML file in this submission for details on how analysis was conducted). Comparative analyses conducted in the paper were conducted over this set of tree and summarized as the mean +/- the 95% phylogenetic uncertainty interval.GLS-4apr11-subsample.treIndividual flow cytometry data points, Carex subgenus VigneaFlow cytometry data were analyzed in FlowJo software to estimate genome sizes, following protocols described in the publication associated with this dataset. This Excel spreadsheet contains the individual flow cytometry data points used to estimate genome size for all species in the publication.Raw-final-FCMVigneData102910toJaime.xls
DOI: 10.5281/zenodo.18391773
title: Producciones_VOD_España_2020_2024
DOI: 10.5061/dryad.s4v872h3
title: Data from: Ecological effects on metabolic scaling amphipod responses to fish predators in freshwater springs

description: Metabolic rate is commonly thought to scale with body mass to the
 3/4-power as a result of universal body-design constraints. However,
 recent comparative work has shown that the metabolic scaling slope may
 vary significantly among species and higher taxa, apparently in response
 to different lifestyles and ecological conditions, though the precise
 mechanisms involved are not well understood. To better understand these
 under-appreciated ecological effects and their causes, it is important to
 control for extraneous phylogenetic and environmental influences. We
 demonstrate how this may be done by comparing the ontogenetic scaling of
 resting metabolic rate among populations of the same species (the amphipod
 Gammarus minus) in mid-Appalachian freshwater springs with similar,
 relatively constant environmental conditions, except for the varying
 presence of the predatory fish Cottus cognatus. We found that populations
 of G. minus exhibit significantly lower metabolic scaling slopes (0.54 to
 0.62) in three freshwater springs with C. cognatus than in two springs
 without these fish (0.76 to 0.77). We tested multiple hypothetical causes
 for these population differences. Our results best supported the
 hypothesis that metabolic scaling was influenced by the effects of
 size-selective predation on the ontogeny of growth, a metabolically
 expensive process. The body-size scaling of growth is significantly less
 steep in the populations inhabiting springs with versus without fish, thus
 paralleling the interpopulation differences in metabolic scaling.
 Prematurational growth of G. minus is as high or higher in the fish
 springs, whereas postmaturational growth is significantly lower, often
 approaching zero. Similarly the amphipods in the fish springs tend to have
 higher metabolic rates at small sizes, but lower metabolic rates at large
 sizes, compared to those in the fishless springs. Our results do not
 support other hypothetical causes of the interpopulation variation in
 metabolic scaling, including differential scaling of cell size or
 low-metabolism body components (fat and mineralized exoskeleton), or
 possible effects of other environmental factors associated with the
 presence of fish. However, fish-induced population differences in adult
 behavioral activity may influence metabolic scaling in G. minus, a
 possibility under current study. We conclude that ecological factors may
 significantly influence metabolic scaling, contrary to common belief.
description: Ecological Monographs
 11-0264Data on body mass,
 metabolic rate, ash content, eye facet size and number (as indices of cell
 size and number), total eye area, and growth rate of individuals of
 Gammarus minus collected in the field from five freshwater springs with
 and without fish predators.
DOI: 10.57955/66613895-d26d-4972-a852-038452c8d9d7
title: Reliability of Surface Electromyography During High-Risk Single-Leg Jump Landing and 90° Sidestep Cutting in Female Footballers

description: Processed muscle activation data
DOI: 10.15468/ybeek2
title: Clemson University Herbarium

description: The Clemson University Herbarium is dedicated to the acquisition and distribution of information on the taxonomy, biogeography and conservation of native species of the southeastern United States. It is one of the largest collections in the state and serves as a more or less permanent documentation of the flora of South Carolina. The herbarium is maintained as a research and educational tool available to Clemson University students, faculty and staff as well as interested individual researchers from throughout the world.
DOI: 10.5061/dryad.962262h9
title: Data from: Selective bird predation on the peppered moth: the last experiment of Michael Majerus

description: Colour variation in the peppered moth Biston betularia was long accepted
 to be under strong natural selection. Melanics were believed to be fitter
 than pale morphs because of lower predation at daytime resting sites on
 dark, sooty bark. Melanics became common during the industrial revolution,
 but since 1970 there has been a rapid reversal, assumed to have been
 caused by predators selecting against melanics resting on today's
 less sooty bark. Recently, these classical explanations of melanism were
 attacked, and there has been general scepticism about birds as selective
 agents. Experiments and observations were accordingly carried out by
 Michael Majerus to address perceived weaknesses of earlier work.
 Unfortunately, he did not live to publish the results, which are analysed
 and presented here by the authors. Majerus released 4864 moths in his
 six-year experiment, the largest ever attempted for any similar study.
 There was strong differential bird predation against melanic peppered
 moths. Daily selection against melanics (s ≃ 0.1) was sufficient in
 magnitude and direction to explain the recent rapid decline of melanism in
 post-industrial Britain. These data provide the most direct evidence yet
 to implicate camouflage and bird predation as the overriding explanation
 for the rise and fall of melanism in moths.
description: Slides of talk by
 Michael Majerus, Uppsala, 2007Describes the data from
 the peppered moth that he had collected 2001-2006, including the results
 from his new experiment and the observations of natural resting sites of
 the moth.SwedenPepperedmoth2007Ppt.pdfTranscript of talk by Michael Majerus, Uppsala, 2007This is Michael Majerus' transcript of the talk he gave at Uppsala, Sweden, on 22 Aug 2007. This is the original PDF format he published on his website.Swedentalk220807.pdfTranscript of talk by Michael Majerus, Uppsala, 2007 (raw ANSI text version)This is Michael Majerus' transcript of the talk he gave at Uppsala, Sweden, on 22 Aug 2007. This is a raw text version of the PDF file he originally made publicSwedentalk220807.txt
DOI: 10.5061/dryad.d7k5r5d2
title: Data from: Ecological and evolutionary dynamics of coexisting lineages during a long-term experiment with E. coli

description: Closely related organisms usually occupy similar ecological niches,
 leading to intense competition and even extinction. Such competition also
 can promote rapid phenotypic evolution and ecological divergence. This
 process may end with the stable occupation of distinct niches or,
 alternatively, may entail repeated bouts of evolution. Here we examine two
 Escherichia coli lineages, called L and S, that coexisted for more than
 30,000 generations after diverging from a common ancestor. Both lineages
 underwent sustained phenotypic evolution based on global transcription and
 resource utilization profiles, with L seeming to encroach over time on the
 catabolic profile of S. Reciprocal invasion experiments with L and S
 clones from the same or different generations revealed evolutionary
 changes in their interaction, including an asymmetry that confirmed the
 encroachment by L on the niche of the S lineage. In general, L and S
 clones from the same generation showed negative frequency-dependent
 effects, consistent with stable coexistence. However, L clones could
 invade S clones from both earlier and later generations, whereas S clones
 could invade only L clones from earlier generations. In this system, the
 long-term coexistence of competing lineages evidently depended on
 successive rounds of evolution, rather than on initial divergence followed
 by a static equilibrium.
description: raw_competition_dataRaw competition colony counts and calculated fitness values for all competitionsraw_biologGENIII_dataRaw growth data of the bacterial strains in the biolog GENIII microplatebiolog_GENIII_dataFor all growth conditions in the Biolog GENIII microplates, growth yield of the 7 bacterial samples and growth yield ratio of the eight bacterial comparisons. Results of the clustering analyses and of the Wilcoxon sum-rank tests for the eight comparisons are also indicated.transcriptome_dataAnalysis of transcriptomic data. Average expression ration, p-values and q-values are indicated for the probe sets. For each probe set, gene ontology category, regulators, and results of the clustering analyses are indicated
DOI: 10.15468/dl.xfaufu
title: Occurrence Download

description: A dataset containing 18662 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mastocarpus stellatus"
 ]
}

 The dataset includes 18662 records from 227 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001719-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18387565
title: DIVINE: Andalusia Agroclimatic Information Network Historic Datasets - CADIZ- (June 24 - May 25)

description: This dataset contains high-resolution daily agroclimatic data from the RIA (Red de Información Agroclimática de Andalucía) network, managed by IFAPA. The data has been collected as part of the DIVINE project to support research in precision agriculture, water management, and climate adaptation in Southern Spain.

The dataset covers the period from June 1, 2024, to May 31, 2025, providing key parameters such as temperature (mean, max, min), humidity, wind speed, solar radiation, precipitation, and calculated ETo (Evapotranspiration) using the Penman-Monteith method.

Geographic Coverage and Station Distribution: The dataset includes part of the processed records from 123 monitoring stations distributed across the 8 provinces of Andalusia. In this case the data includes the ones in Cádiz.

Data Format:





Format: JSON (JavaScript Object Notation).




Naming Convention: 34 [Province_ID] [Station_ID] DIVINE [Station_Name] ([Province]).json




Coordinate System: WGS84 (included within the metadata of individual station files).



Source: Data retrieved from the official IFAPA RIAWS API (Junta de Andalucía).
DOI: 10.5281/zenodo.18387566
title: DIVINE: Andalusia Agroclimatic Information Network Historic Datasets - CADIZ- (June 24 - May 25)

description: This dataset contains high-resolution daily agroclimatic data from the RIA (Red de Información Agroclimática de Andalucía) network, managed by IFAPA. The data has been collected as part of the DIVINE project to support research in precision agriculture, water management, and climate adaptation in Southern Spain.

The dataset covers the period from June 1, 2024, to May 31, 2025, providing key parameters such as temperature (mean, max, min), humidity, wind speed, solar radiation, precipitation, and calculated ETo (Evapotranspiration) using the Penman-Monteith method.

Geographic Coverage and Station Distribution: The dataset includes part of the processed records from 123 monitoring stations distributed across the 8 provinces of Andalusia. In this case the data includes the ones in Cádiz.

Data Format:





Format: JSON (JavaScript Object Notation).




Naming Convention: 34 [Province_ID] [Station_ID] DIVINE [Station_Name] ([Province]).json




Coordinate System: WGS84 (included within the metadata of individual station files).



Source: Data retrieved from the official IFAPA RIAWS API (Junta de Andalucía).
DOI: 10.5061/dryad.cq5kp20f
title: Data from: The evolution of cranial form and function in theropod dinosaurs: insights from geometric morphometrics

description: Theropod dinosaurs, an iconic clade of fossil species including
 Tyrannosaurus and Velociraptor, developed a great diversity of body size,
 skull form, and feeding habits over their 160+ million year evolutionary
 history. Here we utilise geometric morphometrics to study broad patterns
 in theropod skull shape variation, and compare the distribution of taxa in
 cranial morphospace (form) to both phylogeny and quantitative metrics of
 biting behaviour (function). We find that theropod skulls primarily differ
 in relative anteroposterior length and snout depth, and to a lesser extent
 in orbit size and depth of the cheek region, and oviraptorosaurs deviate
 most strongly from the “typical” and ancestral theropod morphologies.
 Non-carnivorous taxa generally fall out in distinct regions of morphospace
 and exhibit greater overall disparity than carnivorous taxa, whereas
 large-bodied carnivores independently converge on the same region of
 morphospace. The distribution of taxa in morphospace is strongly
 correlated with phylogeny, but only weakly correlated with functional
 biting behavior. These results imply that phylogeny, not biting function,
 was the major determinant of theropod skull shape.
description: BrusatteetalTheropodMorphometricsSuppInfoJEBRevised2Supplementary Information including full details of all morphometric, functional, and statistical tests, as well as results.BrusatteTheropodTPSfileTPS file for morphometric analysis.