cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12686111
title: Kaggle_Notebook_Annotations

description: The script used to download notebooks, the notebooks, the labelling criteria, the annotations of labelled notebooks, and the notebook for processing the results are all available online.
DOI: 10.6084/m9.figshare.12686111.v1
title: Kaggle_Notebook_Annotations

description: The script used to download notebooks, the notebooks, the labelling criteria, the annotations of labelled notebooks, and the notebook for processing the results are all available online.
DOI: 10.21227/8fr6-7886
title: MemXCT Reproducibility Dataset

description: Includes the performance and scaling result of MemXCT.
DOI: 10.5519/qd.l2l3gu3b
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (218 records)
DOI: 10.15468/963gvm
title: Description of the female, redescription of the male, and host associations of the Nearctic species Sphaeropthalma jacala Schuster (Hymenoptera: Mutillidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Pitts, James P., Parker, Frank D. (2005): Description of the female, redescription of the male, and host associations of the Nearctic species Sphaeropthalma jacala Schuster (Hymenoptera: Mutillidae). Zootaxa 1011 (1): 55-64, DOI: 10.11646/zootaxa.1011.1.2, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.1011.1.2
DOI: 10.6084/m9.figshare.14888931
title: Models and tables for review article: Sleep, circadian rhythm and gut microbiota

description: Tables: Summary of present studies availble.Figures: Models illustrating signaling pathways, GM component changes, etc.
DOI: 10.6084/m9.figshare.14888931.v1
title: Models and tables for review article: Sleep, circadian rhythm and gut microbiota

description: Tables: Summary of present studies availble.Figures: Models illustrating signaling pathways, GM component changes, etc.
DOI: 10.15468/ryeggr
title: Melychiopharis: an atypical orb-weaving spider from South America (Araneae: Araneidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Santos, Adalberto J., Brescovit, Antonio D., Levi, Herbert W. (2005): Melychiopharis: an atypical orb-weaving spider from South America (Araneae: Araneidae). Zootaxa 1016 (1): 57-64, DOI: 10.11646/zootaxa.1016.1.7, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.1016.1.7
DOI: 10.15468/nsayse
title: A new species of Ommatius Wiedemann (Diptera: Asilidae) from Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Vieira, Rodrigo, Castro, Ivan, Bravo, Freddy (2005): A new species of Ommatius Wiedemann (Diptera: Asilidae) from Brazil. Zootaxa 1017 (1): 19-24, DOI: 10.11646/zootaxa.1017.1.2, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.1017.1.2
DOI: 10.25345/c5224b
title: MassIVE MSV000087730 - Tal Keren Kaplan and Juan Bonifacino LFQ data
title: Label free quantitation of 15 samples. Data acquisition was performed on UltiMate 3000 RSLC/Orbitrap Fusion Lumos system. The database search was performed with Proteome Discoverer 2.4 using SequestHT as search engine.
DOI: 10.5066/p972jauc
title: Data release for Greater Yellowstone Climate Assessment (vol 1), Chapter 7. Future Water Projections for the GYA

description: We apply a monthly water-balance model (MWBM) to simulate components of the water balance for the period 1950-2099 under RCP4.5 and RCP8.5 for the Greater Yellowstone Climate Assessment. We use the statistically downscaled MACAv2-METDATA temperature and precipitation data from 20 GCMs from the Climate Model Intercomparison Program Phase 5 (CMIP5) as input to the water balance model. The statistically downscaled dataset is: MACAv2-METDATA: Multivariate Adaptive Constructed Analogs (Abatzoglou & Brown, 2012, bias corrected by METDATA, Abatzoglou, 2013) Users interested in the downscaled temperature and precipitation files are referred to the dataset home page: MACAv2-METDATA: http://maca.northwestknowledge.net The 20 included GCMs are: bcc-csm1-1-m, bcc-csm1-1, BNU-ESM, CanESM2, CCSM4, CNRM-CM5, CSIRO-Mk3-6-0, GFDL-ESM2G, GFDL-ESM2M, HadGEM2 CC365, HadGEM2-ES365, inmcm4, IPSL-CM5A-LR, IPSL CM5A-MR, IPSL-CM5B-LR, MIROC5, MIROC-ESM, MIROC ESM CHEM, MRI-CGCM3, NorESM1-M
DOI: 10.6084/m9.figshare.14888907
title: Review_Figshare_File.xlsx

description: This contains information about the studies included in a review where the search took place in 2018.
DOI: 10.15468/8jnyqz
title: Camelobaetidius francischettii: a new species of Baetidae (Ephemeroptera) from Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Salles, F. F., Andrade, M. B., Da-Silva, E. R. (2005): Camelobaetidius francischettii: a new species of Baetidae (Ephemeroptera) from Brazil. Zootaxa 1027 (1): 47-53, DOI: 10.11646/zootaxa.1027.1.3, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.1027.1.3
DOI: 10.15468/m8hq4x
title: New species of Chrysosoma Guérin-Méneville (Diptera: Dolichopodidae), with a key to Chinese species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Zhu, Yajun, Yang, Ding (2005): New species of Chrysosoma Guérin-Méneville (Diptera: Dolichopodidae), with a key to Chinese species. Zootaxa 1029 (1): 47-60, DOI: 10.11646/zootaxa.1029.1.4, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.1029.1.4
DOI: 10.15468/xc8uwq
title: A new species and five new records of the family Echiniscidae (Tardigrada) from China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Li, Xiaochen, Wang, Lizhi, Liu, Ying, Su, Lina (2005): A new species and five new records of the family Echiniscidae (Tardigrada) from China. Zootaxa 1093 (1): 25-33, DOI: 10.11646/zootaxa.1093.1.2, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.1093.1.2
DOI: 10.6084/m9.figshare.14578383
title: Bodhicaryāvatārapiṇḍārtha of Śrīdharmapāla

description: This e-text provides the first reconstructed Sanskrit text of the *Bodhicaryāvatārapiṇḍārtha of Śrīdharmapāla, a distillation of Śāntideva's Bodhicaryāvatāra in 29.5 verses that otherwise survives only in Tibetan translation. It is published together with and as a supplement to this peer-reviewed working paper: Sinclair, Iain. 2021-07-01. 'Dharmakīrti of Kedah: His Life, Work and Troubled Times.' Singapore: Temasek History Research Centre, ISEAS-Yusof Ishak Institute.
DOI: 10.6084/m9.figshare.14889183
title: Additional file 4 of A systematic review of moral reasons on orphan drug reimbursement

description: Additional file 4. Raw data. Includes all data extracted from included articles.
DOI: 10.6084/m9.figshare.14889183.v1
title: Additional file 4 of A systematic review of moral reasons on orphan drug reimbursement

description: Additional file 4. Raw data. Includes all data extracted from included articles.
DOI: 10.6084/m9.figshare.14889219.v1
title: Additional file 1 of Altered hypothalamic DNA methylation and stress-induced hyperactivity following early life stress

description: Additional file 1: Table S1. List of qPCR primers and associated UPL probe used in this manuscript. Table S2 List of genes identified by 3’ mRNA sequencing with a logFC greater than 0.5. Table S3 List of DMRs identified by meDIP sequencing with an FDR less than 0.05.
DOI: 10.6084/m9.figshare.14889219
title: Additional file 1 of Altered hypothalamic DNA methylation and stress-induced hyperactivity following early life stress

description: Additional file 1: Table S1. List of qPCR primers and associated UPL probe used in this manuscript. Table S2 List of genes identified by 3’ mRNA sequencing with a logFC greater than 0.5. Table S3 List of DMRs identified by meDIP sequencing with an FDR less than 0.05.
DOI: 10.6084/m9.figshare.14889237.v1
title: Additional file 1 of COVID-19 lockdown disrupts support networks integral to maintaining foot health: a mixed-methods study

description: Additional file 1. Qualitative themes, subthemes, and codes.
DOI: 10.6084/m9.figshare.14889237
title: Additional file 1 of COVID-19 lockdown disrupts support networks integral to maintaining foot health: a mixed-methods study

description: Additional file 1. Qualitative themes, subthemes, and codes.
DOI: 10.6084/m9.figshare.14386211
title: Analyzing data of clay layer of core MDG-OWK 12 collected at Oiwake in Mt. Tateyama, central Japan

description: For the clay layer core at the bottom of the MDG-OWK12 core collected at Oiwake in Tateyama in 2012, a measurement sample with a diameter of 4 mm and a length of 5 mm was collected, and ignition residue (inorganic matter) and ignition loss (organic matter) were measured. Furthermore, the number of particles contained in the ignition residue by particle size was measured. As a result, the weight of each measurement sample changed significantly from 20 to 52 mg, and the change depended on the weight change of the inorganic substance. In addition, this core contained a certain amount of organic matter in all layers, and 9 to 17% of the dry weight of the sample was organic matter. In addition, the distribution of the number of particles by particle size was very similar to that in precipitation. From these facts, it was considered that this clay layer was not formed by weathering of the basement rock, but was formed by the deposition of aeolian dust. The organic matter in the sample was considered to be a decomposition product of some plant growing on the accumulated aeolian dust.<br>Table 1. Measurement results of measurement samples with a diameter of 4 mm and a length of 5 mm collected from the clay layer core at the bottom of the MDG-OWK12 core.
DOI: 10.6084/m9.figshare.14386211.v1
title: Analyzing data of clay layer of core MDG-OWK 12 collected at Oiwake in Mt. Tateyama, central Japan

description: For the clay layer core at the bottom of the MDG-OWK12 core collected at Oiwake in Tateyama in 2012, a measurement sample with a diameter of 4 mm and a length of 5 mm was collected, and ignition residue (inorganic matter) and ignition loss (organic matter) were measured. Furthermore, the number of particles contained in the ignition residue by particle size was measured. As a result, the weight of each measurement sample changed significantly from 20 to 52 mg, and the change depended on the weight change of the inorganic substance. In addition, this core contained a certain amount of organic matter in all layers, and 9 to 17% of the dry weight of the sample was organic matter. In addition, the distribution of the number of particles by particle size was very similar to that in precipitation. From these facts, it was considered that this clay layer was not formed by weathering of the basement rock, but was formed by the deposition of aeolian dust. The organic matter in the sample was considered to be a decomposition product of some plant growing on the accumulated aeolian dust.<br>Table 1. Measurement results of measurement samples with a diameter of 4 mm and a length of 5 mm collected from the clay layer core at the bottom of the MDG-OWK12 core.
DOI: 10.6084/m9.figshare.14554989
title: Supplementary Material for: Molecular identification and cellular localisation of a corticotropin-releasing hormone type neuropeptide in an echinoderm

description: Medicine
DOI: 10.6084/m9.figshare.14890224
title: Supplementary Material for: Percentage of Age-Predicted Cardiorespiratory Fitness Is Inversely Associated with Cardiovascular Disease Mortality: A Prospective Cohort Study

description: <b><i>Introduction:</i></b> Percentage of age-predicted cardiorespiratory fitness (% age-predicted CRF) is a potentially useful cardiopulmonary exercise testing (CPX) parameter, but there are limited data on its prognostic relevance for adverse cardiovascular disease (CVD) outcomes. We aimed to assess the association of % age-predicted CRF with CVD mortality and the extent to which % age-predicted CRF measurements could improve the prediction of CVD mortality. <b><i>Methods:</i></b> Peak oxygen uptake, used as the measure of CRF, was directly assessed in 2,276 men who underwent CPX. The age-predicted CRF estimated from a regression equation for age was transformed to % age-predicted CRF with the following formula: (achieved CRF/age-predicted CRF) × 100. Hazard ratios (HRs) (95% confidence intervals [CIs]) and measures of risk discrimination for CVD mortality were calculated. <b><i>Results:</i></b> During a median follow-up of 28.5 years, 643 fatal CVDs were recorded. The relationship between % age-predicted CRF and CVD mortality was dose response in nature. In analysis adjusted for conventional risk factors, one standard deviation increase in % age-predicted CRF was associated with a reduced risk of CVD mortality (HR 0.61; 95% CI: 0.56–0.67), which was minimally attenuated on further adjustment for several other confounders (HR 0.71; 95% CI: 0.64–0.78). Addition of % age-predicted CRF to a CVD mortality risk prediction model containing established risk factors significantly improved risk discrimination and reclassification. <b><i>Conclusion:</i></b> Percentage of age-predicted CRF is inversely and independently associated with CVD mortality in a graded fashion and significantly improves the prediction and classification of the long-term risk for CVD mortality beyond established risk factors.
DOI: 10.6084/m9.figshare.14890224.v1
title: Supplementary Material for: Percentage of Age-Predicted Cardiorespiratory Fitness Is Inversely Associated with Cardiovascular Disease Mortality: A Prospective Cohort Study

description: <b><i>Introduction:</i></b> Percentage of age-predicted cardiorespiratory fitness (% age-predicted CRF) is a potentially useful cardiopulmonary exercise testing (CPX) parameter, but there are limited data on its prognostic relevance for adverse cardiovascular disease (CVD) outcomes. We aimed to assess the association of % age-predicted CRF with CVD mortality and the extent to which % age-predicted CRF measurements could improve the prediction of CVD mortality. <b><i>Methods:</i></b> Peak oxygen uptake, used as the measure of CRF, was directly assessed in 2,276 men who underwent CPX. The age-predicted CRF estimated from a regression equation for age was transformed to % age-predicted CRF with the following formula: (achieved CRF/age-predicted CRF) × 100. Hazard ratios (HRs) (95% confidence intervals [CIs]) and measures of risk discrimination for CVD mortality were calculated. <b><i>Results:</i></b> During a median follow-up of 28.5 years, 643 fatal CVDs were recorded. The relationship between % age-predicted CRF and CVD mortality was dose response in nature. In analysis adjusted for conventional risk factors, one standard deviation increase in % age-predicted CRF was associated with a reduced risk of CVD mortality (HR 0.61; 95% CI: 0.56–0.67), which was minimally attenuated on further adjustment for several other confounders (HR 0.71; 95% CI: 0.64–0.78). Addition of % age-predicted CRF to a CVD mortality risk prediction model containing established risk factors significantly improved risk discrimination and reclassification. <b><i>Conclusion:</i></b> Percentage of age-predicted CRF is inversely and independently associated with CVD mortality in a graded fashion and significantly improves the prediction and classification of the long-term risk for CVD mortality beyond established risk factors.
DOI: 10.6084/m9.figshare.14889954.v1
title: Additional file 2 of Contemporary procedure characteristics and outcomes of accessory atrioventricular pathway ablations in an integrated community-based health care system using a tiered approach

description: Additional file 2. Cost of Supplies for EP Cases KP 2020. The spreadsheet shows the vendors, part numbers, and cost of disposable supplies in 2021 US dollars.
DOI: 10.6084/m9.figshare.14889870.v1
title: Additional file 2 of Comparative transcriptome analysis reveals distinct gene expression profiles in Brachypodium distachyon infected by two fungal pathogens

description: Additional file 2: Table S1. Sequencing metrics of the RNA-seq libraries. Table S2. Differentially expressed genes of Brachypodium highly specific to F. graminearum or M. oryzae infection. Table S3. Metabolic pathway enrichment analysis on Brachypodium infected by F. graminearum or M. oryzae. Table S4. Differentially expressed RLK genes of Brachypodium during the infection by F. graminearum or M. oryzae. Table S5. Differentially expressed secondary metabolism genes of Brachypodium during the infection by F. graminearum or M. oryzae
DOI: 10.6084/m9.figshare.14889742.v1
title: Additional file 8 of A systems pharmacology approach based on oncogenic signalling pathways to determine the mechanisms of action of natural products in breast cancer from transcriptome data

description: Additional file 8: Supplementary Table 5. Enriched pathways in up- and down-regulated subnetworks. FDR
DOI: 10.6084/m9.figshare.14889739.v1
title: Additional file 7 of A systems pharmacology approach based on oncogenic signalling pathways to determine the mechanisms of action of natural products in breast cancer from transcriptome data

description: Additional file 7: Supplementary Table 4. Pathways enriched in whole subnetworks. FDR
DOI: 10.6084/m9.figshare.14889736.v1
title: Additional file 6 of A systems pharmacology approach based on oncogenic signalling pathways to determine the mechanisms of action of natural products in breast cancer from transcriptome data

description: Additional file 6: Supplementary Table 3. Results of subnetwork betweenness- and degree centrality analysis.
DOI: 10.6084/m9.figshare.14889669.v1
title: Additional file 5 of Combined prenatal Lactobacillus reuteri and ω-3 supplementation synergistically modulates DNA methylation in neonatal T helper cells

description: Additional file 5. Table S5. Table of pathways obtained from pathway enrichment analyses on DMCs from the LP vs. PP comparison. Analyses were conducted using clusterProfiler R package and the KEGG PATHWAY database. Pathways with an adjusted p-value of 0.1 or lower were considered significantly relevant.
DOI: 10.6084/m9.figshare.14889666.v1
title: Additional file 4 of Combined prenatal Lactobacillus reuteri and ω-3 supplementation synergistically modulates DNA methylation in neonatal T helper cells

description: Additional file 4. Table S4. Table of pathways obtained from pathway enrichment analyses on DMCs from the Lω vs. PP comparison. Analyses were conducted using clusterProfiler R package and the KEGG PATHWAY database. Pathways with an adjusted p-value of 0.1 or lower were considered significantly relevant.
DOI: 10.6084/m9.figshare.14889660.v1
title: Additional file 2 of Combined prenatal Lactobacillus reuteri and ω-3 supplementation synergistically modulates DNA methylation in neonatal T helper cells

description: Additional file 2. Table S2. Table of differentially methylated genes (DMGs) with corresponding direction of methylation from the three treatment comparisons (Lω, LP and Pω). DMGs were defined as genes with at least one DMC, and the direction of methylation depended on the direction of methylation for all DMCs in the gene. Hypomethylation is defined as &gt; -5% mean methylation difference (MMD), hypermethylation as &gt; +5% MMD and mixed methylation genes contained DMCs of both directions. L – Lactobacillus reuteri, ω – ω-3 fatty acids, P – placebo.
DOI: 10.6084/m9.figshare.14889657.v1
title: Additional file 1 of Combined prenatal Lactobacillus reuteri and ω-3 supplementation synergistically modulates DNA methylation in neonatal T helper cells

description: Additional file 1. Table S1. Table of extracted differentially methylated CpGs (DMCs) with corresponding mean methylation difference (MMD) from the three treatment comparisons (Lω, LP and Pω vs. PP, respectively). DMCs were defined as having a MMD of &gt; ±5% along with an FDR-corrected p-value of &lt;0.1. L – Lactobacillus reuteri, ω – ω-3 fatty acids, P – placebo.
DOI: 10.6084/m9.figshare.14889621.v1
title: Additional file 4 of Upregulated CD58 is associated with clinicopathological characteristics and poor prognosis of patients with pancreatic ductal adenocarcinoma

description: Additional file 4: Table S2. CD58 functional enrichment analysis and KEGG pathway analysis.
DOI: 10.6084/m9.figshare.14889618.v1
title: Additional file 3 of Upregulated CD58 is associated with clinicopathological characteristics and poor prognosis of patients with pancreatic ductal adenocarcinoma

description: Additional file 3: Table S1. Genes positively and negatively correlated with CD58 expression.
DOI: 10.6084/m9.figshare.14889583.v1
title: Additional file 3 of Spatial clustering and genetic diversity of Mycobacterium tuberculosis isolate among pulmonary tuberculosis suspected patients, Arsi Zone, Ethiopia

description: Additional file 3. Table S2. Information of MIRU-VNTR characterized isolates with country of origin, distrcits of each patient, name and order of each locus.
DOI: 10.6084/m9.figshare.14889520.v1
title: Additional file 8 of Embryonic thermal manipulation impacts the postnatal transcriptome response of heat-challenged Japanese quails

description: Additional file 8.
DOI: 10.6084/m9.figshare.14889517.v1
title: Additional file 7 of Embryonic thermal manipulation impacts the postnatal transcriptome response of heat-challenged Japanese quails

description: Additional file 7.
DOI: 10.6084/m9.figshare.14889502.v1
title: Additional file 2 of Embryonic thermal manipulation impacts the postnatal transcriptome response of heat-challenged Japanese quails

description: Additional file 2.
DOI: 10.6084/m9.figshare.14889499.v1
title: Additional file 1 of Embryonic thermal manipulation impacts the postnatal transcriptome response of heat-challenged Japanese quails

description: Additional file 1.
DOI: 10.6084/m9.figshare.14890693.v1
title: Supplementary Table 3 from Development, implementation and impact of a new preprint solicitation process at <i>Proceedings B</i>

description: Preprint editorial team survey questions and responses
DOI: 10.6084/m9.figshare.14890696
title: Supplementary Table 1;Supplementary Table 2 from Development, implementation and impact of a new preprint solicitation process at <i>Proceedings B</i>

description: Topical submission data for traditional and solicited papers at Proceedings B. ;Author origin submission data for traditional and solicited papers at Proceedings B.
DOI: 10.6084/m9.figshare.14890693
title: Supplementary Table 3 from Development, implementation and impact of a new preprint solicitation process at <i>Proceedings B</i>

description: Preprint editorial team survey questions and responses
DOI: 10.6084/m9.figshare.14890696.v1
title: Supplementary Table 1;Supplementary Table 2 from Development, implementation and impact of a new preprint solicitation process at <i>Proceedings B</i>

description: Topical submission data for traditional and solicited papers at Proceedings B. ;Author origin submission data for traditional and solicited papers at Proceedings B.
DOI: 10.6084/m9.figshare.14889438.v1
title: Additional file 7 of A novel DNA methylation signature is associated with androgen receptor activity and patient prognosis in bone metastatic prostate cancer

description: Additional file 7: Table S4. CpG sites of the AR gene shown in Figure 3A.
DOI: 10.6084/m9.figshare.14889435.v1
title: Additional file 6 of A novel DNA methylation signature is associated with androgen receptor activity and patient prognosis in bone metastatic prostate cancer

description: Additional file 6: Table S3. Differetially methylated CpGs in promoter regions of genes in bone metastases (M) compared to localized prostate tumors (T), their correlations to corresponding gene expression levels, and the fold change in gene expression levels between sample groups.