cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.12770/1fe8e51a-3f18-425b-a553-8951a3638216
title: Données de concentrations en chlorophylle-a issues des images satellite Sentinel-3 utilisées pour le D5C2 du cycle 3 de la DCSMM

description: Données de concentration en chlorophylle-a obtenues à partir de l'analyse des images satellite Sentinel-3 par la méthode développée par le RBINS :
- Elles couvrent la totalité de la Manche et de la Mer du Nord pour la période 2015-2020. 
- Elles sont obtenues à l’échelle journalière.
- Les images possèdent une résolution spatiale d’environ 1 km² par pixel = une donnée de mesure (ce qui représente environ 73 000 pixels par image pour les SRM MMN et MC depuis la ligne de base jusqu’à la limite de la ZEE). Toutefois pour chaque image, tous les pixels ne sont pas exploitables sous forme de données car certaines zones peuvent être cachées par une couverture nuageuse ce qui empêche le capteur d'effectuer des mesures de couleur de l'eau. Sur la période d’évaluation (2015-2020) et pour les mois pris en compte pour le calcul des indicateurs, ces données manquantes représentent en moyenne 65 % des données avec une très forte variabilité saisonnière (entre 0 % et 100 %) et inter UGE. Les données manquantes ne sont toutefois pas interpolées (produits de niveau L3), la quantité de données exploitables étant suffisante pour alimenter les indicateurs (en moyenne ~1 donnée tous les 3 à 4 jours par km²).
DOI: 10.5517/ccdc.csd.cc2gw1p3
title: CCDC 2290115: Experimental Crystal Structure Determination

description: Related Article: Etienne Cotter|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gw1yc
title: CCDC 2290123: Experimental Crystal Structure Determination

description: Related Article: Etienne Cotter|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gw1zd
title: CCDC 2290124: Experimental Crystal Structure Determination

description: Related Article: Etienne Cotter|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6073/pasta/a76ded1894ce59ef30f8f6c2028b525b
title: Fungal Diversity in Sarracenia Purpurea Pitchers at Harvard Forest 2009-2010

description: The carnivorous pitcher plant Sarracenia purpurea is widely distributed in the United States and Canada, and is host to a variety of symbiotic organisms, including symbiotic fungi. Culturing of S. purpurea pitcher contents in its native range uncovers diverse single-celled (yeast) communities; these yeast communities are dominated by the ascomycete yeast Candida pseudoglaebosa. We set out to understand how fungal diversity in S. purpurea pitchers changes over space and time, and how C. pseudoglaebosa might influence this diversity.
 In the summer of 2009, we assayed S. purpurea pitcher water fungal succession in Tom Swamp in Harvard Forest. We sequenced fungal DNA barcodes from 43 pitchers at different times throughout the growing season, and found that C. pseudoglaebosa has a strong impact on fungal diversity. It generally appears in pitchers early in succession, and once it arrives, it often becomes dominant quickly and decreases community evenness. We also identified two other culturable yeasts, Rhodotorula babjevae and Moesziomyces aphidis, which are common but not dominant in pitchers. In laboratory experiments, C. pseudoglaebosa outcompetes these two yeasts, but only if it is inoculated in large numbers, suggesting that C. pseudoglaebosa’s dominance is a consequence of early arrival during pitcher succession.
 The following summer (2010), we collected water from pitchers at five distant sites in the United States and Canada, and assayed fungal community diversity and C. pseudoglaebosa genetic diversity. We sampled pitcher plants from Tom Swamp in Harvard Forest, plus four other sites in British Columbia, Newfoundland, Georgia, and Florida (Floridian plants were Sarracenia rosea, a close relative of S. purpurea). Fungal communities tended to be structured geographically, with close communities resembling each other more than distant communities. In contrast, C. pseudoglaebosa exhibited three populations: one well-mixed population including isolates from Harvard Forest, Georgia, and Newfoundland (East Coast), one from Florida, and one from British Columbia. Taken together, these results suggest that C. pseudoglaebosa dispersal is not limited along the East Coast, but that there may be other ecological factors preventing mixing between Florida and the East Coast population.
DOI: 10.5061/dryad.6354b.2/3.2
title: KingClonalityData

description: Number log-ratio data for the 31 samples in the manuscript. It is a gzipped text file.
DOI: 10.5061/dryad.6595s/1
title: Clarke_GS_2015_JAPPLE_Suppression_Data

description: All Data was collected throughout experiments and entered into Excel spreadsheets. Data relating to each figure in Clarke et al. 2015 is on separate worksheets. All information relating to methodology, abbreviations and data collection are within the associated paper.
DOI: 10.5061/dryad.72c92/1
title: Observed and Predicted abundance

description: This file contains the observed and predicted abundances for the whole small mammal community (“Total abundance”), and for Didelphis aurita and Philander frenatus separately, across 18 forest fragments.
DOI: 10.5061/dryad.72c92/2
title: Data for simulation

description: These data were used to simulate (model) the Geometric Edge Effect (GEE)
DOI: 10.5061/dryad.7fq4j/1
title: Diet experiment data

description: Data collected in the laboratory in Montreal, Quebec (Canada). "Ladybirds" = Coleomegilla maculata; "Parasitoid" = Dinocampus coccinellae.
DOI: 10.5061/dryad.8616.1
title: Data from: Historical introgression and the role of selective vs. neutral processes in structuring nuclear genetic variation (AFLP) in a circumpolar marine fish, the capelin (Mallotus villosus)
DOI: 10.5061/dryad.8g0s3/1
title: AllSamples_n107_EnvData_wLatLong

description: These data represent latitude and longitude coordinates for the 107 wolves used in this study for selection tests. The 12 environmental variables for each coordinate were downloaded within ArcGIS from various WORLDCLIM databases (http://www.worldclim.org/). Please see descriptions on website for information on what each variable measures. From the website: "Please note that the temperature data are in °C * 10. This means that a value of 231 represents 23.1 °C. This does lead to some confusion, but it allows for much reduced file sizes which is important as for many downloading large files remains difficult. The unit used for the precipitation data is mm (millimeter)."
DOI: 10.5061/dryad.8g0s3/2
title: Variant file in VCF format

description: Genic variants for 107 individuals in VCF v4.1 format. For details on genotype calling and filtering, see Methods and Supplemental Information sections.
DOI: 10.5061/dryad.c119t/1
title: Hering_etal_JAPPL_2015_Data

description: Abundance data of the organism groups and raw values of abiotic response variables investigated (e.g. habitat diversity). These values were used to calculate Bray-Curtis dissimilarity indices for the restored and respective degraded sites.
DOI: 10.5061/dryad.d4m07/9
title: Mondol et al. 2015- Elephant Y-Chromosome data

description: Sequence alignment file with 719 bp Y Chromosome partial sequences of both forest, savanna and hybrid elephants. This file contains sequences of pure reference African forest and savanna elephants and Asian elephants from Genbank, along with sequences generated through this study from pure (forest and savanna) and hybrid elephants. Total 91 sequences are aligned in this file.
DOI: 10.5061/dryad.f9n8t/1
title: GPS tracking data of homing pigeon flights from a release site

description: Each csv file contains the data recoded from a GPS device from one pigeon. Initially birds were released in flocks of five from either site HC or BE, eight times. This is the first half of the data. The release site is followed by the name of the individual and then the release number (release site_individual_release number). Then groups were combined into two groups of ten labelled AB or CD. The second half of the data release site and then group,  individual and release (Release site Group _ individual_ release number). The columns are labeled. It is 5 Hz data.
DOI: 10.5061/dryad.hh3j7/1
title: traditional CVRF in relation to cIMT_PLOSONE2015

description: This file contains an SPSS document with all data used for the analysis described in the PLOS ONE article.
DOI: 10.5061/dryad.kv478/1
title: Microsatellite data Baillons Crake

description: Data of 6 microsatellite loci for Baillons Crake Zapornia pusilla
DOI: 10.5061/dryad.m112v/1
title: Data predictor study STEPd (clean, labeled, recoded & totaalscores)

description: Baseline predictors and post-treatment outcome data (BDI severity at 7 months). RCT with 151 participants randomized to cognitive therapy or interpersonal therapy.
DOI: 10.5061/dryad.mj17h/1
title: Raw coordinates of data set 1 (nts format)
DOI: 10.5061/dryad.mj17h/2
title: Raw coordinates of data set 2 (nts format)
DOI: 10.5061/dryad.mj17h/3
title: Sliders file of data set 1 (nts format)
DOI: 10.5061/dryad.mj17h/4
title: Sliders file of data set 2 (nts format)
DOI: 10.5061/dryad.mt24h/47
title: No.24 TB patient's microbiome (Group A)

description: Group A means the microbiome from lesion-free lung lobe; Group B means the microbiome from lesion-forming lung lobe; Group H means the microbiome from healthy individuals.
DOI: 10.5061/dryad.mt24h/48
title: No.24 TB patient's microbiome (Group B)

description: Group A means the microbiome from lesion-free lung lobe; Group B means the microbiome from lesion-forming lung lobe; Group H means the microbiome from healthy individuals.
DOI: 10.5061/dryad.mt24h/49
title: No.25 TB patient's microbiome (Group A)

description: Group A means the microbiome from lesion-free lung lobe; Group B means the microbiome from lesion-forming lung lobe; Group H means the microbiome from healthy individuals.
DOI: 10.5061/dryad.mt24h/50
title: No.25 TB patient's microbiome (Group B)

description: Group A means the microbiome from lesion-free lung lobe; Group B means the microbiome from lesion-forming lung lobe; Group H means the microbiome from healthy individuals.
DOI: 10.5061/dryad.mt24h/51
title: No.26 TB patient's microbiome (Group A)

description: Group A means the microbiome from lesion-free lung lobe; Group B means the microbiome from lesion-forming lung lobe; Group H means the microbiome from healthy individuals.
DOI: 10.5061/dryad.mt24h/52
title: No.26 TB patient's microbiome (Group B)

description: Group A means the microbiome from lesion-free lung lobe; Group B means the microbiome from lesion-forming lung lobe; Group H means the microbiome from healthy individuals.
DOI: 10.5061/dryad.mt24h/53
title: No.27 TB patient's microbiome (Group A)

description: Group A means the microbiome from lesion-free lung lobe; Group B means the microbiome from lesion-forming lung lobe; Group H means the microbiome from healthy individuals.
DOI: 10.5061/dryad.mt24h/54
title: No.27 TB patient's microbiome (Group B)

description: Group A means the microbiome from lesion-free lung lobe; Group B means the microbiome from lesion-forming lung lobe; Group H means the microbiome from healthy individuals.
DOI: 10.5061/dryad.mt24h/55
title: No.28 TB patient's microbiome (Group A)

description: Group A means the microbiome from lesion-free lung lobe; Group B means the microbiome from lesion-forming lung lobe; Group H means the microbiome from healthy individuals.
DOI: 10.5061/dryad.ps326/1
title: Three-spine stickleback morphology

description: This file contains the primary data underlying the analyses described in the published article. The first tab of the file includes explanation of the variables (columns) in the second tab which contains the data.
DOI: 10.5061/dryad.q9c98/1
title: STRs_length

description: Individual genotypes of bark beetle populations for STRs loci
DOI: 10.5061/dryad.q9c98/2
title: mtDNA_sequences

description: COI_gene individual sequences of bark beetle populations
DOI: 10.5061/dryad.sq35b/1
title: Data of Nakanishi et al. 2015
DOI: 10.5061/dryad.v72q6/1
title: Generation 12 assay

description: Journal of Evolutionary Biology"Loss of adaptation following reversion suggests trade-offs in host use by a seed beetle"Messina and DurhamThe data for this paper are placed in four Excel files, one for each assay - after 12, 25, 35, and 45 generations of reversion. For the first three files (Generation 12-35 assays), the coding variables for the two dependent variables, development time and weight, are Line (1-3), Subline (NonReverted and Reverted), and Sex (F or M). These columns are followed by coding variables for the third dependent variable Survival: Line, Subline, and Survival (Yes or No). These columns are followed by the actual counts in each Y or N column. All of the dependent variables were measured solely on lentil seeds.For the Generation 45 assay, only the L1 and L1R lines were used, but beetle performance was measured on both lentil seeds and mung beans. The coding variables for development time and weight are Subline (NR or R), Host (MUNG OR LENTIL), and Sex (F or M). These columns are followed by coding variables for Survival: Subline (NonReverted and Reverted), Host (MUNG OR LENTIL), and Survival (Yes or No). These columns are followed by the actual counts in each Y or N column.
DOI: 10.5061/dryad.v72q6/2
title: Generation 25 assay
DOI: 10.5061/dryad.v72q6/3
title: Generation 35 assay
DOI: 10.5061/dryad.v72q6/4
title: Generation 45 assay
DOI: 10.5061/dryad.1356f/1
title: Heat Shock Experiment

description: This file contains data of an experiment that tested the aphids carrying X-type or cured from X-type in control and heat shock conditions.  Their survival and subsequent fecundity were measured.
DOI: 10.5061/dryad.1356f/2
title: Experiment on performance on Trifolium pratense

description: This file contains data of an experiment that tested the aphids' performance on Trifolium pratense.  The aphids either carried X-type or were cured.
DOI: 10.5061/dryad.1356f/3
title: Experiment on performance on Medicago sativa

description: This file contains data of an experiment that tested the aphid genotype 217's performance on Medicago sativa. The aphids either carried X-type or were cured.
DOI: 10.5061/dryad.1356f/4
title: Experiment testing susceptibility to Aphidius ervi

description: This file contains data of an experiment that tested the aphids' susceptibility to the parasitoid wasp Aphidius ervi. The aphids either carried X-type or were cured.
DOI: 10.5061/dryad.15v26/1
title: OscillatingSpeedTrial1_SacralMotion

description: Sacral marker motion for oscillating speed trial 1.
DOI: 10.5061/dryad.15v26/2
title: OscillatingSpeedTrial2_SacralMotion

description: Sacral marker motion for oscillating speed trial 2.
DOI: 10.5061/dryad.15v26/3
title: OscillatingSpeedTrial3_SacralMotion

description: Sacral marker motion for oscillating speed trial 3.
DOI: 10.5061/dryad.15v26/4
title: OscillatingSpeedTrial4_SacralMotion

description: Sacral marker motion for oscillating speed trial 4.
DOI: 10.5061/dryad.15v26/5
title: OscillatingSpeedTrial5_SacralMotion

description: Sacral marker motion for oscillating speed trial 5.
DOI: 10.5061/dryad.15v26/6
title: OscillatingSpeedTrial6_SacralMotion

description: Sacral marker motion for oscillating speed trial 6.
DOI: 10.5061/dryad.1ds1q/1
title: Gannet GPS, air pressure and temperature telemetry data

description: Zip file contains (1) GPS data collected by tracking adult breeding northern gannets from Bass Rock at either 2 minute or 1 second intervals. File names correspond to logger deployment day and bird ID. Fields: TIME in UTC; LON = longitude; LAT = latitude; GPS_ALT = height recorded by GPS (m); GPS_SPD = speed recorded by GPS; TRIP = foraging trip number; DIST = distance travlled since previous fix (m); SECS = interval elapsed since previous fix (s); CALC_SPD = speed derrived from previous two varibales (m/s); COL_DIST = distance by sea from colony (km); STATUS = in colony (COL), in flight (FLIGHT) or on water (WATER). (2) ambient pressure and temperature data collected using loggers deployed on adult breeding northern gannets from Bass Rock. File names correspond to logger deployment day and bird ID. Fields: TIME in UTC; P = pressure (Pa); T = temperature (C).
DOI: 10.5061/dryad.31733/53
title: RUN3-TAG-67_R1_paired

description: Fastq data : see sup. table 1 (MER-15-0195) for more details
DOI: 10.5061/dryad.31733/54
title: RUN3-TAG-67_R2_paired

description: Fastq data : see sup. table 1 (MER-15-0195) for more details
DOI: 10.5061/dryad.31733/55
title: RUN3-TAG-70_R1_paired

description: Fastq data : see sup. table 1 (MER-15-0195) for more details
DOI: 10.5061/dryad.31733/56
title: RUN3-TAG-70_R2_paired

description: Fastq data : see sup. table 1 (MER-15-0195) for more details
DOI: 10.5061/dryad.31733/57
title: RUN3-TAG-55

description: Pennisetum glaucum 18311 sample - chloroplast enrichment library (MiSeq) - .bam file containing reads after mapping on the chloroplast genome. Only reads properly mapped were used
DOI: 10.5061/dryad.31733/58
title: RUN3-TAG-56

description: Pennisetum glaucum 18945 sample - chloroplast enrichment library (MiSeq) - .bam file containing reads after mapping on the chloroplast genome. Only reads properly mapped were used
DOI: 10.5061/dryad.31733/59
title: RUN3-TAG-57

description: Pennisetum glaucum 19529 sample - chloroplast enrichment library (MiSeq) - .bam file containing reads after mapping on the chloroplast genome. Only reads properly mapped were used
DOI: 10.5061/dryad.31733/60
title: RUN3-TAG-59

description: Pennisetum glaucum 9024 sample - chloroplast enrichment library (MiSeq) - .bam file containing reads after mapping on the chloroplast genome. Only reads properly mapped were used
DOI: 10.5061/dryad.31733/61
title: RUN3-TAG-65

description: Pennisetum glaucum PE01514 sample - chloroplast enrichment library (MiSeq) - .bam file containing reads after mapping on the chloroplast genome. Only reads properly mapped were used
DOI: 10.5061/dryad.3j380/1
title: Flowering time selection Dryad

description: Flowering time selection data
DOI: 10.5061/dryad.40c31/1
title: Figures, Tables, and Additional files

description: Fig.1 Phylogenetic relationships, exon-intron structure, and motif structures of BURP domain-containing gene. Fig. 2 Multiple sequence alignment of several BURP domain-containing protein sequences. Table 1. Promoter analysis of BURP domain-containing gene family.Table 2. Estimates of the dates of the segmental duplication events of the BURP domain-containing gene family. Table 3. Genes involved in tandem duplication and their 4DTv values. Table 4. Functional divergence between subfamilies of the BURP domain-containing gene family. Table 5. Tests for positive selection among codons of BURP domain-containing genes using site models.  Table 6 Parameter estimation and likelihood ratio tests for the branch-site models. Data S1 Protein sequence data for the BURP domain-containing gene family. Data S2 Coding sequence data for the BURP domain-containing gene family. Data S3 Genome sequence data for the BURP domain-containing gene family. Data S4 1500 bp of nucleotide sequences upstream of the translation initiation codon of BURP genes. Data S5 Multiple sequence alignment of BURP domain-containing gene family. Data S6. Schematic of motifs of BURP domain-containing proteins. Data S7. Promoter analysis performed on the BURP domain-containing gene family.
DOI: 10.5061/dryad.5d23f/1
title: PIPFIL_MALES for MULTI

description: Multistate Capture Histories
DOI: 10.5061/dryad.5d23f/2
title: Morphological Data for BCI

description: Morphological variables used for condition indices
DOI: 10.5061/dryad.5d23f/3
title: PIPFIL_Mark_Models

description: Mark Model DBF files
DOI: 10.5061/dryad.6tn4h/1
title: Time series data of Lakes Poway, Miramar, and Murray

description: This data file contains both abiotic and biotic variables for each lake for each sampling date. The data included are described in the ReadMe file.
DOI: 10.5061/dryad.6tn4h/2
title: Water chemistry data for Lakes Poway, Miramar, and Murray

description: Water chemistry parameters measured by YSI Professional Plus. Details are included in the ReadMe file.
DOI: 10.5061/dryad.6tn4h/3
title: Zooplankton lengths for Lakes Poway, Miramar, and Murray

description: Zooplankton lengths for zooplankton samples counted (see other zooplankton data). These data were used to determine zooplankton biomass.
DOI: 10.5061/dryad.6tn4h/4
title: Zooplankton abundance for Lakes Poway, Miramar, and Murray

description: Zooplankton were counted and then measured (see other zooplankton data) to determine community biomass. Details are included in the ReadMe file.
DOI: 10.5061/dryad.8962f/1
title: JAE_Grouper_Decoy_Data

description: This dataset includes the five foraging metrics quantified during predator and control trials including: (a) percentage of seagrass consumed/hour, (b) bites on seagrass/hour, (c) bites on benthos/hour, (d) individual feeding rates (bites/minute) and (e) forager size (cm). The data is aggregated by plot and by distance from the predator decoy. Additionally, we include the number of natural predators observed from video footage aggregated at the site level and at the distance level. Metadata is included in the file describing each column.
DOI: 10.5061/dryad.8962f/2
title: JAE_Video_Data

description: This dataset includes observations from video footage during both predator and control treatments. Each line in the datasheet is a single foraging episode by a herbivore on either the seagrass assay or on the benthos surrounding the assay. The foray number and bites taken are entered in separate columns and the individual foraging rate (bites/second) was calculated and included in another column. Predators and mesopredators that were observed in the field of view are recorded on separate rows. The number of territorial damselfish observed in the area surrounding the seagrass assay at each distance from the predator decoy is shown in a separate column. Metadata describing the data is included in the file.
DOI: 10.5061/dryad.8g0s3/10
title: EMMAX results file (BLACK)

description: Results file generated from EMMAX for genotype-phenotype analysis for black coat color.
DOI: 10.5061/dryad.8g0s3/11
title: EMMAX Results file (WHITE)

description: Results file generated from EMMAX for genotype-phenotype analysis for white coat color.
DOI: 10.5061/dryad.8g0s3/3
title: Bayenv results file for genic SNPs

description: This is the output averaged from 10 independent runs of Bayenv for genic SNPs in 107 wolves and 6 ecotypes. Column headers are provided in the file.
DOI: 10.5061/dryad.8g0s3/4
title: Bayenv output file for neutral SNPs

description: This is the output averaged across 10 runs of Bayenv using neutral SNPs, in 107 wolves and 6 ecotypes. The results in this file were used as a null for determining empirical significance for the genic SNPs. See paper text for details.
DOI: 10.5061/dryad.8g0s3/5
title: BayeScan results file for genic SNPs

description: This is the output file from BayeScan run with genic SNPs for 107 wolves and 6 ecotypes.