cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16654804.v4
title: Canola nitrogen use efficiency and soil nitrogen cycling in response to varying nitrogen fertilizer rates across hybrid canola varieties and their parents

description: @font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:Calibri; panose-1:2 15 5 2 2 2 4 3 2 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1073786111 1 0 415 0;}@font-face {font-family:SimSun; panose-1:2 1 6 0 3 1 1 1 1 1; mso-font-charset:134; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:3 680460288 22 0 262145 0;}@font-face {font-family:"Palatino Linotype"; panose-1:2 4 5 2 5 5 5 3 3 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870265 1073741843 0 0 415 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; margin-bottom:.0001pt; text-align:justify; text-justify:inter-ideograph; line-height:17.0pt; mso-pagination:widow-orphan; font-size:12.0pt; mso-bidi-font-size:10.0pt; font-family:"Times New Roman"; mso-fareast-font-family:"Times New Roman"; color:black; mso-fareast-language:DE;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-size:10.0pt; mso-ansi-font-size:10.0pt; mso-bidi-font-size:10.0pt; font-family:Calibri; mso-ascii-font-family:Calibri; mso-fareast-font-family:SimSun; mso-hansi-font-family:Calibri;}div.WordSection1 {page:WordSection1;} Improving nitrogen use efficiency (NUE) is essential for sustainable agriculture, especially in high N demanding crops such as canola (<i>Brassica napus</i>). While advancements in aboveground agronomic practices have improved NUE, research on soil and belowground processes are limited. Plant NUE—and its components, N uptake efficiency (NUpE) and N utilization efficiency (NUtE)—can be further improved by exploring crop variety and soil N cycling. Canola parental genotypes (NAM-0 and NAM-17) and hybrids (H151857 and H151816) were grown on a Dark Brown Chernozem in Saskatchewan, Canada. Soil and plant samples were collected at the 5-6 leaf stage, and flowering and seeds were collected at harvest maturity. Soil N cycling varied with phenotypic stage, with higher potential ammonium oxidation rates at the 5-6 leaf stage and higher urease activity at flowering. Seed N uptake was higher under higher N rates, while the converse was true for NUE metrics. Hybrids had higher yield, seed N uptake, NUtE, and NUE—with higher NUE potentially owing to higher NUtE at flowering, which led to higher yield and seed N allocation. Soil N cycling and soil N concentrations correlated for improved canola NUE, revealing belowground breeding targets.
DOI: 10.6084/m9.figshare.16654804
title: Canola nitrogen use efficiency and soil nitrogen cycling in response to varying nitrogen fertilizer rates across hybrid canola varieties and their parents

description: @font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}@font-face {font-family:Calibri; panose-1:2 15 5 2 2 2 4 3 2 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1073786111 1 0 415 0;}@font-face {font-family:SimSun; panose-1:2 1 6 0 3 1 1 1 1 1; mso-font-charset:134; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:3 680460288 22 0 262145 0;}@font-face {font-family:"Palatino Linotype"; panose-1:2 4 5 2 5 5 5 3 3 4; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870265 1073741843 0 0 415 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; margin-bottom:.0001pt; text-align:justify; text-justify:inter-ideograph; line-height:17.0pt; mso-pagination:widow-orphan; font-size:12.0pt; mso-bidi-font-size:10.0pt; font-family:"Times New Roman"; mso-fareast-font-family:"Times New Roman"; color:black; mso-fareast-language:DE;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-size:10.0pt; mso-ansi-font-size:10.0pt; mso-bidi-font-size:10.0pt; font-family:Calibri; mso-ascii-font-family:Calibri; mso-fareast-font-family:SimSun; mso-hansi-font-family:Calibri;}div.WordSection1 {page:WordSection1;} Improving nitrogen use efficiency (NUE) is essential for sustainable agriculture, especially in high N demanding crops such as canola (<i>Brassica napus</i>). While advancements in aboveground agronomic practices have improved NUE, research on soil and belowground processes are limited. Plant NUE—and its components, N uptake efficiency (NUpE) and N utilization efficiency (NUtE)—can be further improved by exploring crop variety and soil N cycling. Canola parental genotypes (NAM-0 and NAM-17) and hybrids (H151857 and H151816) were grown on a Dark Brown Chernozem in Saskatchewan, Canada. Soil and plant samples were collected at the 5-6 leaf stage, and flowering and seeds were collected at harvest maturity. Soil N cycling varied with phenotypic stage, with higher potential ammonium oxidation rates at the 5-6 leaf stage and higher urease activity at flowering. Seed N uptake was higher under higher N rates, while the converse was true for NUE metrics. Hybrids had higher yield, seed N uptake, NUtE, and NUE—with higher NUE potentially owing to higher NUtE at flowering, which led to higher yield and seed N allocation. Soil N cycling and soil N concentrations correlated for improved canola NUE, revealing belowground breeding targets.
DOI: 10.6084/m9.figshare.16654804.v3
title: Canola nitrogen use efficiency and soil nitrogen cycling in response to varying nitrogen fertilizer rates across hybrid canola varieties and their parents

description: "Category A Variables": In season data exploring canola nitrogen (N) use efficiency by studying below-ground soil N status, soil pH, soil N cycling, and plant N uptake. Above-ground variables were also studied to determine plant biomass, N utilization efficiency, and N uptake efficiency.<br>"Category B Variables": End of season (harvest) data exploring canola N use efficiency by studying seed yield and seed N content, thousand seed weight, oil and protein content, and plant time to flowering and duration of flowering. We also looked at seed N use efficiency and partial factor productivity.<br>
DOI: 10.25345/c5cc2g
title: MassIVE MSV000088135 - A conserved nucleotide-dependent metal chaperone for managing the cellular zinc economy during zinc limitation
title: How cells safeguard essential zinc-dependent functions during zinc deficiency is poorly understood. A long-debated strategy is whether soluble metal-trafficking chaperones exist to prioritize specific zinc-dependent proteins. We identified a eukaryotic family of metallochaperones that physically interacts with zinc-dependent methionine aminopeptidase type I (MAP1) in human and yeast. Deletion of the yeast metallochaperone-encoding gene NMC1 (formerly YNR029c) leads to a zinc-deficiency growth defect and defective initiator methionine cleavage caused by loss of Map1p activity. To better understand the observed fitness defects due to the lack of NMC1 under zinc deficiency, we used proteomics with Tandem Mass Tag (TMT) quantitation derived from WT, nmc1Delta, and map2Delta nmc1Delta strains grown in zinc-limited (1 uM) or zinc-replete (100 uM) conditions. Proteomics reveal global impacts due to the loss of NMC1 and Map1p function, including mis-regulation of the Zap1p regulon, and suggests that Nmc1p is required to avoid a compounding effect of Map1p dysfunction on cell survival during zinc deficiency.
DOI: 10.5281/zenodo.5519837
title: Gene family data from the PhyloGenes (release version 3.2, phylogenes.org)

description: The data files were generated from the PhyloGenes 3.2 release (see release notes here). About the two zip files: 1. phyloXML.zip (there is no change from the PhyloGenes 3.0 release) PhyloGenes gene family trees in PhyloXML format, one file per family (e.g. &lt;family_ID&gt;.xml). The following information is provided for each node of a tree:<br> 1) leaf node:<br> branch length<br> name &lt;gene_id&gt;<br> taxonomy scientific_name<br> sequence accession &lt;UniProt ID&gt; 2) non-leaf node:<br> branch length<br> events &lt;duplication or speciation&gt; <br> 2. CSV.zip Functional information of family members in CSV format, one file per family (e.g. &lt;family_ID&gt;.csv). A CSV file includes the following columns:<br> Uniprot ID<br> Gene &lt;Gene name. If none then Gene ID&gt;<br> Gene ID<br> Gene name<br> Organism<br> Subfamily name The columns displayed after 'Subfamily name', if any, are GO annotations. Each column is a GO molecular function or biological process term that is annotated to at least one member of the gene family AND the annotation is supported by an experimental evidence (indicated by 'EXP') or phylogenetic inference (indicated by 'IBA'). A '0' indicates absence of either annotations.
DOI: 10.5281/zenodo.5519836
title: Gene family data from the PhyloGenes (release version 3.2, phylogenes.org)

description: The data files were generated from the PhyloGenes 3.2 release (see release notes here). About the two zip files: 1. phyloXML.zip (there is no change from the PhyloGenes 3.0 release) PhyloGenes gene family trees in PhyloXML format, one file per family (e.g. &lt;family_ID&gt;.xml). The following information is provided for each node of a tree:<br> 1) leaf node:<br> branch length<br> name &lt;gene_id&gt;<br> taxonomy scientific_name<br> sequence accession &lt;UniProt ID&gt; 2) non-leaf node:<br> branch length<br> events &lt;duplication or speciation&gt; <br> 2. CSV.zip Functional information of family members in CSV format, one file per family (e.g. &lt;family_ID&gt;.csv). A CSV file includes the following columns:<br> Uniprot ID<br> Gene &lt;Gene name. If none then Gene ID&gt;<br> Gene ID<br> Gene name<br> Organism<br> Subfamily name The columns displayed after 'Subfamily name', if any, are GO annotations. Each column is a GO molecular function or biological process term that is annotated to at least one member of the gene family AND the annotation is supported by an experimental evidence (indicated by 'EXP') or phylogenetic inference (indicated by 'IBA'). A '0' indicates absence of either annotations.
DOI: 10.5281/zenodo.5519966
title: Open-Source Software Product Line Extraction Processes: the ArgoUML-SPL and Phaser Cases

description: Collection of datasets and analysis scripts supporting the information provided in the text. There are two compressed files, one for the ArgoUML data and one for the Phaser data. Each compressed file contains a README describing important information.
DOI: 10.5281/zenodo.5519965
title: Open-Source Software Product Line Extraction Processes: the ArgoUML-SPL and Phaser Cases

description: Collection of datasets and analysis scripts supporting the information provided in the text. There are two compressed files, one for the ArgoUML data and one for the Phaser data. Each compressed file contains a README describing important information.
DOI: 10.5517/ccdc.csd.cc27whk6
title: CCDC 2082008: Experimental Crystal Structure Determination

description: Related Article: Debabrata Dhara, Pradeep Kumar Pal, Ramapada Dolai, Nicolas Chrysochos, Hemant Rawat, Benedict J. Elvers, Ivo Krummenacher, Holger Braunschweig, Carola Schulzke, Vadapalli Chandrasekhar, U. Deva Priyakumar, Anukul Jana|2021|Chem.Commun.|57|9546|doi:10.1039/D1CC04421D
DOI: 10.5281/zenodo.4892781
title: Density, kinematic viscosity, surface tension, distillation curve, and flash point data of diesel-biodiesel blends

description: This dataset contains measurement data for density, kinematic viscosity, surface tension, distillation curve, initial boiling point, and flash point for different biodiesel samples blended with standard diesel fuel. Properties of coconut oil methyl ester, palm oil methyl ester, and biodiesel from waste cooking oil were evaluated in terms of temperature and biodiesel volume fraction. For a detailed description of the measurements and further information, please see the published paper.
DOI: 10.34711/inptdat.384
title: Self-consistent Cathode-Plasma Coupling and Role of the Fluid Flow Approach in Torch Modelling - Dataset

description: The data set is related to a two-dimensional and stationary magneto-hydrodynamic model of a plasma spray torch operated with argon, which is developed to predict the plasma properties in a steady operating mode. The model couples a submodel of a refractory cathode and its non-equilibrium boundary layer to a submodel of the plasma in local thermodynamic equilibrium in a self-consistent manner. The Navier-Stokes equations for a laminar and compressible flow are solved in terms of low- and high-Mach number numerical approaches. The results show that the Mach number can reach values close to one. Simulations are performed for electric currents of 600 A and 800 A, and gas flow rates of 40, 60, and 80 NLPM. The plasma parameters obtained by the two approaches differ and the differences become more pronounced for higher currents and gas flow rates. The arc voltage, the electric power, and the thermal efficiency from both the low-and high-Mach number models of the plasma agree well with experimental findings for a current of 600 A and a flow rate of 40 NLPM. For higher currents and gas flow rates, the results of the low- and high-Mach number models gradually differ and underline the greater appropriateness of the high-Mach number model.
DOI: 10.21227/x5b3-0581
title: Soli Moisture, Air Temperature and Humidity Monitor Data

description: It's a monitoring of automatic grow system, is a study about soil moisture control
DOI: 10.7910/dvn/mclh9v
title: Replication Data for: Rewiring Linked Fate: Bringing Back History, Agency, and Power

description: Linked fate, the concept introduced by Dawson (1994b) almost three decades ago, reoriented the study of racism and political behavior in the U.S. The scholarship traditionally had focused on the racial psychology of whites, how racism seeps into their political views and actions. Dawson proposed the black utility heuristic theory and linked fate, its associated measure, to investigate the political behavior of blacks, the minority group most harmed by racism. Since then, linked fate has become a ubiquitous variable of interest in the research on minority group politics. Yet the research program around linked fate is due for some extension. Most studies gloss over the fact that the black utility heuristic theory, underlying the linked fate concept, is historically and socially conditional. We call for bringing elite level agency back into the literature to clarify the macro- and meso-level conditions under which a group’s racial status translates into linked fate at the individual level. Elite actions are critical to understanding linked fate as a contingent outcome shaped by group historical processes and social practices. We conclude that greater inquiry into these dynamics is not only warranted, but also has broad implications for the research on racial and ethnic politics. It requires rethinking the scope of the evidence and methods researchers utilize to study the politics of racially marginalized groups.
DOI: 10.7278/s50d-n12q-sa1z
title: Data for: Ambient Vibration Modal Analysis of Natural Rock Towers and Fins
DOI: 10.5281/zenodo.5519692
title: Bispectrum testing

description: Matlab code and data for testing the applicability of the wavelet bispectrum to various systems.
DOI: 10.5281/zenodo.5519691
title: Bispectrum testing

description: Matlab code and data for testing the applicability of the wavelet bispectrum to various systems.
DOI: 10.6084/m9.figshare.16655203
title: Supplementary File 1

description: Fasta file with sequence of lacZ-GFP synthetized by Twist Biosciences for chromosomal integration using Landing pad system.
DOI: 10.6084/m9.figshare.16655203.v1
title: Supplementary File 1

description: Fasta file with sequence of lacZ-GFP synthetized by Twist Biosciences for chromosomal integration using Landing pad system.
DOI: 10.5281/zenodo.5520047
title: Dataset of RQA-based measures of a minimal perceptual task using sonification

description: Dataset of RQA-based measures of a minimal perceptual task using sonification
DOI: 10.6084/m9.figshare.16655236
title: Supplementary Table.xlsx

description: Enrichment analyses of RNA-seq data from endometrial stromal cells treated with PGE2 and thrombin.
DOI: 10.6084/m9.figshare.16655236.v1
title: Supplementary Table.xlsx

description: Enrichment analyses of RNA-seq data from endometrial stromal cells treated with PGE2 and thrombin.
DOI: 10.25919/wzjd-kn82
title: Parkes observations for project P1066 semester 2021APRS_24

description: We propose 36 hrs of Parkes observations to continue our successful Deeper, Wider, Faster (DWF) program to detect fast transients and fast radio burst (FRB) counterparts and help resolve their nature. DWF coordinates over 80 observatories worldwide at all wavelengths, from radio to gamma-ray to detect and follow-up FRBs and other elusive fast (millisecond-to-hours duration) transients. Crucially, we coordinate simultaneous deep, fast-cadenced, wide-field observations at all wavelengths to observe the same field at the same time as Parkes, enabling multi-wavelength detection before, during, and after the radio detection. Little to no multi-wavelength observations to any significant depth have been done on these timescales, leaving this parameter space underexplored. DWF coordinates major facilities to observe with Parkes, such as South Pole Telescope (mm/sub-mm), GROND (infrared), CTIO Dark Energy Camera (optical), Astrosat (UV/X-ray), HXMT (X-ray), HESS (gamma-ray), and Pierre Auger (high-energy). We perform realtime data processing and transient identification at all wavelengths that enables triggering our deep, rapid-response (within minutes) follow up programs for deep spectroscopy and imaging using the world's largest telescopes (e.g., Keck, VLT, Gemini, SALT, ATCA).
DOI: 10.25919/x2wy-yr47
title: Parkes observations for project P1066 semester 2021APRS_25

description: We propose 36 hrs of Parkes observations to continue our successful Deeper, Wider, Faster (DWF) program to detect fast transients and fast radio burst (FRB) counterparts and help resolve their nature. DWF coordinates over 80 observatories worldwide at all wavelengths, from radio to gamma-ray to detect and follow-up FRBs and other elusive fast (millisecond-to-hours duration) transients. Crucially, we coordinate simultaneous deep, fast-cadenced, wide-field observations at all wavelengths to observe the same field at the same time as Parkes, enabling multi-wavelength detection before, during, and after the radio detection. Little to no multi-wavelength observations to any significant depth have been done on these timescales, leaving this parameter space underexplored. DWF coordinates major facilities to observe with Parkes, such as South Pole Telescope (mm/sub-mm), GROND (infrared), CTIO Dark Energy Camera (optical), Astrosat (UV/X-ray), HXMT (X-ray), HESS (gamma-ray), and Pierre Auger (high-energy). We perform realtime data processing and transient identification at all wavelengths that enables triggering our deep, rapid-response (within minutes) follow up programs for deep spectroscopy and imaging using the world's largest telescopes (e.g., Keck, VLT, Gemini, SALT, ATCA).
DOI: 10.25919/3kyn-e722
title: Parkes observations for project P1066 semester 2021APRS_26

description: We propose 36 hrs of Parkes observations to continue our successful Deeper, Wider, Faster (DWF) program to detect fast transients and fast radio burst (FRB) counterparts and help resolve their nature. DWF coordinates over 80 observatories worldwide at all wavelengths, from radio to gamma-ray to detect and follow-up FRBs and other elusive fast (millisecond-to-hours duration) transients. Crucially, we coordinate simultaneous deep, fast-cadenced, wide-field observations at all wavelengths to observe the same field at the same time as Parkes, enabling multi-wavelength detection before, during, and after the radio detection. Little to no multi-wavelength observations to any significant depth have been done on these timescales, leaving this parameter space underexplored. DWF coordinates major facilities to observe with Parkes, such as South Pole Telescope (mm/sub-mm), GROND (infrared), CTIO Dark Energy Camera (optical), Astrosat (UV/X-ray), HXMT (X-ray), HESS (gamma-ray), and Pierre Auger (high-energy). We perform realtime data processing and transient identification at all wavelengths that enables triggering our deep, rapid-response (within minutes) follow up programs for deep spectroscopy and imaging using the world's largest telescopes (e.g., Keck, VLT, Gemini, SALT, ATCA).
DOI: 10.25919/j6c5-q347
title: Parkes observations for project P1066 semester 2021APRS_27

description: We propose 36 hrs of Parkes observations to continue our successful Deeper, Wider, Faster (DWF) program to detect fast transients and fast radio burst (FRB) counterparts and help resolve their nature. DWF coordinates over 80 observatories worldwide at all wavelengths, from radio to gamma-ray to detect and follow-up FRBs and other elusive fast (millisecond-to-hours duration) transients. Crucially, we coordinate simultaneous deep, fast-cadenced, wide-field observations at all wavelengths to observe the same field at the same time as Parkes, enabling multi-wavelength detection before, during, and after the radio detection. Little to no multi-wavelength observations to any significant depth have been done on these timescales, leaving this parameter space underexplored. DWF coordinates major facilities to observe with Parkes, such as South Pole Telescope (mm/sub-mm), GROND (infrared), CTIO Dark Energy Camera (optical), Astrosat (UV/X-ray), HXMT (X-ray), HESS (gamma-ray), and Pierre Auger (high-energy). We perform realtime data processing and transient identification at all wavelengths that enables triggering our deep, rapid-response (within minutes) follow up programs for deep spectroscopy and imaging using the world's largest telescopes (e.g., Keck, VLT, Gemini, SALT, ATCA).
DOI: 10.25919/n8z0-ba86
title: Parkes observations for project P1066 semester 2021APRS_28

description: We propose 36 hrs of Parkes observations to continue our successful Deeper, Wider, Faster (DWF) program to detect fast transients and fast radio burst (FRB) counterparts and help resolve their nature. DWF coordinates over 80 observatories worldwide at all wavelengths, from radio to gamma-ray to detect and follow-up FRBs and other elusive fast (millisecond-to-hours duration) transients. Crucially, we coordinate simultaneous deep, fast-cadenced, wide-field observations at all wavelengths to observe the same field at the same time as Parkes, enabling multi-wavelength detection before, during, and after the radio detection. Little to no multi-wavelength observations to any significant depth have been done on these timescales, leaving this parameter space underexplored. DWF coordinates major facilities to observe with Parkes, such as South Pole Telescope (mm/sub-mm), GROND (infrared), CTIO Dark Energy Camera (optical), Astrosat (UV/X-ray), HXMT (X-ray), HESS (gamma-ray), and Pierre Auger (high-energy). We perform realtime data processing and transient identification at all wavelengths that enables triggering our deep, rapid-response (within minutes) follow up programs for deep spectroscopy and imaging using the world's largest telescopes (e.g., Keck, VLT, Gemini, SALT, ATCA).