cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20254419.v1
title: Supplementary Material for: Paraneoplastic Demyelinating Inflammatory Neuropathy Revealing Metastatic Seminoma: A Case Report

description: Paraneoplastic neurological syndrome (PNS) is uncommon and not well known. PNS can reveal cancer, but its role in seminomas has not been described explicitly. We report the case of a 36-year-old man with unremarkable medical history and no comorbidities who was diagnosed with a retroperitoneal metastatic seminoma. The patient’s general condition deteriorated, and he developed progressive neurological palsy without other clinical anomalies. Electromyography revealed demyelinating, non-lengthy neuropathy. Guillain-Barré syndrome was initially suspected. However, a positron emission tomography scan revealed a retroperitoneal mass, and blood markers revealed increased human chorionic gonadotropin. The patient was diagnosed with PNS, and a computed tomography-guided biopsy revealed a metastatic seminoma without a primary tumor. No circulating neural antibodies were detected. Human polyvalent immunoglobulin was simultaneously administered with chemotherapy. After three cycles of a cisplatin-etoposide-bleomycin, a complete biological and metabolic response rate was observed, and his neurological symptoms rapidly improved. Four years later, the patient responded completely, without any neurological complaints. Paraneoplastic demyelinating inflammatory neuropathy can lead to advanced seminoma diagnosis. Prompt management of seminomas with cisplatin-based regimens provides the best chance of cure for both advanced seminoma and paraneoplastic syndrome.
DOI: 10.17632/k6wv3kffzs
title: Replication data for "Urbanization Policy and Economic Development: A Quantitative Analysis of China’s Differential Hukou Reforms"

description: The codes to replicate the results in "Urbanization Policy and Economic Development: A Quantitative Analysis of China’s Differential Hukou Reforms" by Wen-Tai Hsu and Lin Ma
DOI: 10.17632/rjtjf7b74j
title: Clozapine combined with rTMS downregulating EGR3 improves cognitive impairment in a mouse model of schizophrenia

description: Despite its status as a crucial symptom of schizophrenia, the underlying mechanisms of cognitive dysfunction remain inscrutable, and the quest for a definitive treatment continues to be elusive.Our comprehensive research has uncovered significantly elevated expression levels of EGR3 in the serum of schizophrenia patients, as well as in the prefrontal cortex of MK-801-induced schizophrenia-like model mouse.the objective of this study was to delve into the role of EGR3 in alleviating cognitive impairment in schizophrenia through the combined treatment of clozapine and rTMS. We aspire to uncover the potential mechanisms underlying this combined therapy's effect on cognitive impairment in schizophrenia by exploring the expression and functional alterations of EGR3 in depth. Notably, these elevated levels were found to correlate with varying degrees of cognitive impairment, providing valuable insights into the complex mechanisms underlying schizophrenia.
Clozapine combined with rTMS was used to evaluate the cognitive function of patients during treatment, and Enzyme-linked immunosorbent Assay was used to detect the expression of EGR3 to explore its efficacy and study the correlation between EGR3 and cognitive function. Schizophrenia model mice were induced with didrozepine maleate (MK-801), treated with clozapine rTMS, and one group treated with EGR3 agonist. Male BALB/C mice were randomly divided into control group, schizophrenia group, clozapine treatment group and clozapine combined with repeated TMS treatment group. Water maze behavior experiment was performed. Then, the prefrontal cortex tissues of the mice were taken for protein western blot detection and immunohistochemical detection to detect the expression of EGR3 in the prefrontal cortex. To explore the effect of clozapine combined with rTMS on the expression of EGR3, Bcl-2 and Caspase-3. The expression of EGR3 gene, Bcl-2 protein and Caspase-3 egg white in prefrontal cortex of mice were detected by Western blot. The expression of Bcl-2 egg white and Caspase-3 protein in the skin of the anterior frontal lobe of rats was measured by immunohistochemistry.
 Remarkably, the synergistic combination of clozapine and repetitive transcranial magnetic stimulation (rTMS) exhibited profound effects in our model mice. Not only did it effectively lower EGR3 levels in the prefrontal cortex, but it also modulated the expression of Bcl-2 and Caspase-3, ultimately leading to significant improvements in cognitive function. These groundbreaking findings highlight the immense potential of the clozapine-rTMS combination in alleviating cognitive impairment in MK-801-induced schizophrenia-like model mouse, thus providing invaluable insights into innovative therapeutic strategies to address cognitive deficits associated with schizophrenia.
DOI: 10.6084/m9.figshare.14478237.v1
title: R_script_for_running_ResistanceGA.R

description: R script for running ResistanceGA optimizations
DOI: 10.6084/m9.figshare.29093882.v1
title: Large Multi-Modal Model Georeferencing Dataset (LLMGeoref)

description: Multi-modal cartographic georeferencing dataset with labels showing ground truth grid cells for collection location of biological specimens. The dataset also indicates the grid cell size and the textual description provided by the collector and location of collection in decimal latitude and longitudes. If you are using this dataset please cite:<br><br>Large Multi-modal Model Cartographic Map Comprehension for Textual Locality Georeferencing
DOI: 10.6084/m9.figshare.5436106.v1
title: Music.Traditional.Venezuelan.MIDI

description: A collection of pieces of polyphonic music MIDI coded. This group is specifically for traditional Venezuelan music. These files are intended to hear the actual sound of each piece of music. The text files behind these sonic files are analyzed and results are presented in DOI: 10.6084/m9.figshare.5435953 . You won't be able to directly ear music from these files. But you can download and open them with an audio-player software. To see the text representing the music you ear, open the file pretending it is a text-file.
DOI: 10.6084/m9.figshare.7033577.v1
title: Deep Image Reconstruction

description: CNN features decoded from human brain activity; Data used in "Shen et al. (2017) Deep image reconstruction from human brain activity. bioRxiv.<br><br>
DOI: 10.6084/m9.figshare.24603237.v1
title: Incivility Detection in Open Source Code Review and Issue Discussions

description: Replication package of the paper "<i>Incivility Detection in Open Source Code Review and Issue Discussions"</i> published on the <i>Journal of Systems and Software (2023)</i> by Isabella Ferreira, Ahlaam Rafiq, and Jinghui Cheng.
DOI: 10.6084/m9.figshare.25254997.v5
title: submesoscale in Red Sea by glider 2016

description: This item includes raw and gridded underwater glider data for the study of submesoscale processes in Red Sea.The observed parameters include temperature, salinity, depth, chl-a, CDOM, and dissolved oxygen. all the parameters are corrected by quality control procedures suggested in the paper.BG_256_sg213, BG_260_sg214, BG_280_sg212, are datesets include transects along the predetermined trajectory, during autumn, winter, and spring, respectively.grid_213_timegrid, grid_214_timegrid, grid_218_timegrid are gridded datesets which are interpoleted with a time of 3h and a depth of 2m.256_sg213, 260_sg214, 280_sg218 are raw datesates, which includes all of uncorrected parameters provide by underwater glider. A detailed introduction of parameter can be found in the raw datesets.<br>red_model_0209 and red_model_otherday are data of red model data, which includes temperature, salinity and velocites. these data used to valiadate 2-D omega equation and glider obsertion described in the appendix B of the paper.<br>
DOI: 10.6084/m9.figshare.3482546.v1
title: Tests on Thin Reinforced Concrete Walls Subjected to In-plane and Out-of-plane Cyclic Loading - TW4 (4/4) & TW5 (1/3)

description: The present dataset describes an experimental campaign on five thin T-shaped reinforced concrete walls. The tests aimed at assessing the influence of wall thickness on member stability, the role of lap splices on damage distribution and displacement ductility, and the effects of the simultaneous application of out-of-plane loading on the member response.Further data can be downloaded from the links below.<br> If you use the data, please cite: Almeida, J. P., O. Prodan, A. Rosso, and K. Beyer. 2016. Tests on Thin Reinforced Concrete Walls Subjected to in-Plane and out-of-Plane Cyclic Loading. <i>Earthquake Spectra</i>.
DOI: 10.15468/dl.zqh7r2
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rumex acetosella L.",
 "Country is Iran (Islamic Republic of)"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010267-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.cvdncjtdt
title: Data for: Spectral refraction modeling of waves around the steep reef at Palau

description: Western Pacific islands, such as Palau, are vulnerable to wave-driven
 inundation due to low land elevations and limited space for coastal
 retreat.  Assessing the impacts of extreme wave events on these
 low-lying islands requires regional numerical models that account for
 remotely generated waves from all directions and that resolve the complex
 bathymetry surrounding the islands.  Such models often are
 computationally expensive and impractical for operational forecasts. In
 this study, eight years of wave observations from 10 sites around the
 island chain of Palau, at depths ranging from 9.4 m to 17.6 m, are used to
 characterize the spatial variability of the island group's wave
 climate and to test the ability of a spectral refraction model to
 downscale regional wave hindcasts and reproduce the observed incident
 conditions.  The spectral refraction model demonstrates
 significant skill predicting reef edge significant wave heights (mean r2 =
 0.77, mean RMSE = 0.21 m) at the locations of our island scale wave gauge
 array and outperforms a regional 7 km resolution hindcast product based
 upon the WaveWatch III community model (Smith et al. 2021). Furthermore,
 the spectral refraction model accurately downscales wave predictions
 during Typhoon Lan demonstrating its potential for operational forecasting
 and place-based damage and risk assessments during extreme events. When
 used with deep-water wind-wave models as input, spectral refraction
 methods can significantly improve reef edge incident wave boundary
 conditions necessary for shallow water reef modeling with low
 computational cost.
description: Wave observations were measured from RBR Wave Gauges.  Model
 output is from spectral refraction model.
description: # Data for: Spectral refraction modeling of waves around the steep reef at
 Palau
 [https://doi.org/10.5061/dryad.cvdncjtdt](https://doi.org/10.5061/dryad.cvdncjtdt) ## Description of the data and file structure Observations: Wave gauge observations were made using RBR Pressure Sensors.  SRM&gt;Buoy: The spectral refraction model prediction at P10 using the directional wave buoy as the offshore wave spectra. SRM&gt;CAWCR&gt;wavegauge_sites: The spectral refraction model prediction at wave gauge sites using the CAWCR hindcast output. SRM&gt;CAWCR&gt;Babeldaob_Lan: The spectral refraction model prediction at sites around Babeldaob during Typhoon Lan using the CAWCR hindcast output as directional wave spectra. ### Files and variables #### File: Data\_for\_\_Spectral\_Refraction\_Modeling\_of\_Waves\_around\_the\_Steep\_Reef\_at\_Palau-20250205T224351Z-001.zip **Description:** Observations of significant wave height, peak period, mean period, and spectral bandwidth from the 10 wave gauge sites can be found in the Observations directory.  Output from the spectral refraction model can be found in the SRM directory. ## Code/software Netcdf files can be read using python or matlab. ## Access information Data was derived from the following sources: * *http://hdl.handle.net/102.100.100/137152?index=1*
DOI: 10.5061/dryad.dncjsxm99
title: Data from: Genetic differentiation of habitat-forming kelp <em>Ecklonia radiata</em> across an urban estuary

description: Organisms inhabiting estuaries are increasingly exposed to both natural
 and anthropogenic disturbances, such as tidal fluctuations, pollution, and
 rising temperatures. Genetic diversity is essential for species to adapt
 to these environmental challenges, as reduced diversity can lead to
 inbreeding depression and reduced adaptive potential. Here, we genotyped
 the golden kelp Ecklonia radiata, a key habitat-former in temperate
 Australia, across eight sites within Sydney Harbour, an urban estuary
 located in Australia's largest city. Using 2107 neutral
 single-nucleotide polymorphisms (SNPs), we characterised the genetic
 diversity of the golden kelp, described its spatial genetic structure and
 tested for signatures of divergent selection across the harbour. Our
 analysis revealed the presence of two genetic clusters
 (FST = 0.129) with small effective population sizes (Ne
 (inner) = 183.2; Ne (outer) = 16.7).
 The relatively low heterozygosity and elevated inbreeding coefficients
 found in both populations suggest high rates of self-fertilisation across
 the harbour. The strong population structure was consistent with
 significant differences in E. radiata morphology across the harbour.
 Genotype-environment analyses revealed strong associations with light,
 organic matter, copper, manganese and temperature, suggesting adaptation
 to local environments. These findings emphasise the importance of
 considering local adaptation and population structure in restoration
 strategies not only in Sydney Harbour, but also other estuaries facing
 similar challenges.
description: # Data from: Genetic differentiation of habitat-forming kelp *Ecklonia
 radiata* across an urban estuary Dataset DOI:
 [10.5061/dryad.dncjsxm99](https://doi.org/10.5061/dryad.dncjsxm99) ##
 Description of the data and file structure **Data from: “Genetic
 differentiation of habitat-forming kelp** ***Ecklonia radiata*** **across
 an urban estuary”** #### File: ReadMe.docx A copy of the information below
 #### File: Site_coordinates.xlsx **Description:** Site coordinates
 containing Site ID, longitude, and latitude. All abbreviations can be
 found in the second tab of the document. #### File: Kelp_Morphology.xlsx
 **Description:** Morphological data of genotyped kelp individuals,
 containing individual ID and seven morphological traits. All abbreviations
 can be found in the second tab of the document. #### File:
 Environmental_Data.xlsx **Description:** Environmental data containing
 Site ID and five environmental variables. All abbreviations can be found
 in the second tab of the document. #### File: Report_DEck22-7745_SNP_2.csv
 **Description:** Raw genotype data: SNP 2 Rows Format: Each allele scored
 in a binary fashion ("1"=Presence and "0"=Absence).
 Heterozygotes are therefore scored as 1/1 (presence for both alleles/both
 rows). File contains unfiltered genotype information for 75 individuals
 and 27563 SNPs. ## Access information Other relevant data can be found in
 the Supplementary Material for the article.
DOI: 10.15468/dl.jp6g46
title: Occurrence Download

description: A dataset containing 597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-54.73016 -1.53387,-49.47145 -1.53387,-49.47145 4.53207,-54.73016 4.53207,-54.73016 -1.53387))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Testudines"
 ]
}

 The dataset includes 597 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004259-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18407757
title: R290 (Propane) Refrigerant Innovation for High-Ambient HVAC Systems: Strategic R&D Transition White Paper for ALAWAQLA GROUP
DOI: 10.5281/zenodo.18407758
title: R290 (Propane) Refrigerant Innovation for High-Ambient HVAC Systems: Strategic R&D Transition White Paper for ALAWAQLA GROUP
DOI: 10.5061/dryad.bnzs7h4n7
title: Spatial organization of fish assemblages and its relation to environmental factors in the lower Yalong River, China

description: Based on data collected from 31 sampling sites during June and August 2018
 in the three ordered rivers (the tributaries of the Anning River, the
 Anning River, and the lower Yalong River), fish assemblages in the region
 were investigated regarding their spatial variations, and their
 relationship with environmental factors. In total, 48 species were
 collected, with 47 being native and one being exotic. Among them, one was
 classified as endangered. Fish species diversity increased first and then
 decreased, reaching its peak in the mid-order river. Obvious variations
 were found in fish assemblages depending on the stream order. There were
 three site-groups: one covering the tributaries of the Anning River, one
 covering the Anning River, and one covering the lower Yalong River. From
 low- to high-order rivers, the alterations of key species within the fish
 communities exhibited a turnover pattern. The fish assemblages in the
 low-order river were primarily dominated by Nemacheilida, whereas the
 mid-order river and the high-order river displayed a dominance of
 Gobioninae and Cultrinae, respectively. These spatial variations might be
 primarily impacted by altitude and water depth. Moreover, this study
 highlights the critical role of mid-order rivers in sustaining fish
 diversity within dendritic stream networks of mountain rivers.
description: # Data from: Spatial organization of fish assemblages and its relation to
 environmental factors in the lower Yalong River, China ## Description of
 the Data and file structure The dataset is composed of two Excel files:
 (1) Env data. xlsx file that contain the information on the environmental
 factor of the lower Yalong River; (2) Spe data. xlsx file that contain the
 information on the fish assemblages of the lower Yalong River (list in
 N%). ### Contents 1.ReadMe.txt - Description of data package 2\. Env data.
 xlsx file - the information on the environmental factor of the lower
 Yalong River. Variables and units can be found in this file. 3\. Spe data.
 xlsx file - the information on the fish assemblages of the lower Yalong
 River. Values are percentage. ### Sampling site information data： Y1-Y10:
 the lower Yalong River A1-A14: the Anning River Z1-Z7: the tributaries of
 the Anning River ## Contact Please contact Baoshan Ma if you need
 additional information on these datasets or notice any discrepancies.
 Email: [baoshanma@yfi.ac.cn](mailto:baoshanma@yfi.ac.cn)
DOI: 10.18112/openneuro.ds007169.v1.0.5
title: Cognitive Workload n-back
DOI: 10.5061/dryad.w9ghx3g18
title: Data from: Erasure-cooling, control, and hyper-entanglement of motion in optical tweezers

description: Coherently controlling the motion of single atoms in optical tweezers
 would enable new applications in quantum information science. To
 demonstrate this, we first prepare atoms in their motional ground state
 using a species-agnostic cooling mechanism that converts motional
 excitations into erasures -- errors with a known location. This cooling
 mechanism fundamentally outperforms idealized traditional sideband
 cooling, which we experimentally demonstrate. By coherently manipulating
 the resultant pure motional state, we perform mid-circuit readout and
 mid-circuit erasure detection via local shelving into motional
 superposition states. We finally entangle the motion of two atoms in
 separate tweezers and generate hyper-entanglement by preparing a
 simultaneous Bell state of motional and optical qubits, unlocking a large
 new class of quantum operations with neutral atoms. 
description: # Data from: Erasure-cooling, control, and hyper-entanglement of motion in
 optical tweezers
 [https://doi.org/10.5061/dryad.w9ghx3g18](https://doi.org/10.5061/dryad.w9ghx3g18) ## Description of the data and file structure The raw data points for each graph presented in the paper are given in the attached data set. The figures shown are:  Figure 2: Improving motional ground state preparation with erasure correction cooling. The figure shows the probability to occupy the motional ground state after standard laser cooling, after erasure cooling with reset, and after erasure cooling with replacement. It further shows the ground state probability for different trap frequencies.  Figure 3: Spin-motion transduction and mid-circuit readout. The figures shows the protocol for spin to motion conversion for mid-circuit readout. Ramsey coherence is measured at different parts of the protocol and a total coherence time of &gt;100 ms is measured when applying a "motion echo" pulse sequence. Figure 4: Entanglement and hyper-entanglement of motion and spin. The figure shows parity oscillations measured after each stage in the hyper-entanglement generation process. ### Files and variables #### File: raw\_data\_motion.csv **Description:** A table with two columns, x and y, is given for each figure, where x denotes values along the x axis and y denotes values along the y axis.