cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.yb4tpd
title: Occurrence Download

description: A dataset containing 4517 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-59.6 -10.19,-59.33 -10.19,-59.33 -9.99,-59.6 -9.99,-59.6 -10.19))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4517 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010172-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13564337
title: modis_aqua
DOI: 10.5281/zenodo.17496697
title: Flexible-photoacoustic-retinal-prosthesis_Source-data
DOI: 10.5281/zenodo.17496698
title: Flexible-photoacoustic-retinal-prosthesis_Source-data
DOI: 10.15468/dl.nkk6ee
title: Occurrence Download

description: A dataset containing 660 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-87.98447 -7.72051,-43.03587 -7.72051,-43.03587 16.71213,-87.98447 16.71213,-87.98447 -7.72051))",
 "HasCoordinate is true",
 "TaxonKey is Conchocarpus"
 ]
}

 The dataset includes 660 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010173-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q8jen6
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micrathyria schumanni"
 ]
}

 The dataset includes 60 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010174-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.56rd92
title: Occurrence Download

description: A dataset containing 7880 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Algaterra Types"
 ]
}

 The dataset includes 7880 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010175-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17496540
title: Dataset from research project about the development of food ingredients and bioactive compounds microcapsules for their addition to food matrices aiming for healthier processed foods.

description: MOST VALUABLE AND PUBLISHED RESULTS OF PID2020-115973RB-C21 PROJECT FUNDED BY MCIN/AEI/10.13039/501100011033
DOI: 10.5281/zenodo.17496539
title: Dataset from research project about the development of food ingredients and bioactive compounds microcapsules for their addition to food matrices aiming for healthier processed foods.

description: MOST VALUABLE AND PUBLISHED RESULTS OF PID2020-115973RB-C21 PROJECT FUNDED BY MCIN/AEI/10.13039/501100011033
DOI: 10.15468/dl.2b6ya8
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Stryphnodendron conicum"
 ]
}

 The dataset includes 14 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010176-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gs8z3d
title: Occurrence Download

description: A dataset containing 1353 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendroctonus ponderosae"
 ]
}

 The dataset includes 1353 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010177-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17496692
title: The cyclin dependent kinase (CDK)7 inhibitor BS-181 is antifungal, causing G2/M arrest and a splicing defect
DOI: 10.34740/kaggle/dsv/13571111
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.13712749
title: Broad utility of ultrasensitive analysis of ctDNA dynamics across solid tumors treated with immunotherapy

description: These data support the publication tentatively titled "Broad utility of ultrasensitive analysis of ctDNA dynamics across solid tumors treated with immunotherapy", and provided all necessary code and processed data to reproduce analysis and figures contained within the manusript.

Abstract

Immune checkpoint inhibitors (ICI) are widely prescribed to treat cancer, but the development of reliable biomarkers to predict ICI response across various cancer types remains challenging. To address this, we used ultrasensitive, patient-specific circulating tumor DNA (ctDNA) testing to study 202 patients (136 in the primary cohort, 66 in a validation cohort) with refractory metastatic pan-solid tumors (24 cancer types), receiving ICI, bispecific antibodies, or immune cell engagers in phase I trials. Ultrasensitive ctDNA analysis served as an early biomarker of improved clinical outcome as early as 21 days after treatment initiation (PreC2). Densely sampled longitudinal ctDNA (1455 plasma samples, averaging 7.2 per patient) showed that ctDNA clearance at any point correlated with radiological response and prolonged survival. Additionally, ctDNA trajectories distinguished true tumor progression from pseudoprogression and predicted outcome of immunotherapy treatment continued beyond progression. These findings, validated in the independent cohort, demonstrate the broad clinical utility of ultrasensitive ctDNA monitoring in immunotherapy-treated cancer patients.
DOI: 10.5281/zenodo.17496736
title: Broad utility of ultrasensitive analysis of ctDNA dynamics across solid tumors treated with immunotherapy

description: These data support the publication tentatively titled "Broad utility of ultrasensitive analysis of ctDNA dynamics across solid tumors treated with immunotherapy", and provided all necessary code and processed data to reproduce analysis and figures contained within the manusript.

Abstract

Immune checkpoint inhibitors (ICI) are widely prescribed to treat cancer, but the development of reliable biomarkers to predict ICI response across various cancer types remains challenging. To address this, we used ultrasensitive, patient-specific circulating tumor DNA (ctDNA) testing to study 202 patients (136 in the primary cohort, 66 in a validation cohort) with refractory metastatic pan-solid tumors (24 cancer types), receiving ICI, bispecific antibodies, or immune cell engagers in phase I trials. Ultrasensitive ctDNA analysis served as an early biomarker of improved clinical outcome as early as 21 days after treatment initiation (PreC2). Densely sampled longitudinal ctDNA (1455 plasma samples, averaging 7.2 per patient) showed that ctDNA clearance at any point correlated with radiological response and prolonged survival. Additionally, ctDNA trajectories distinguished true tumor progression from pseudoprogression and predicted outcome of immunotherapy treatment continued beyond progression. These findings, validated in the independent cohort, demonstrate the broad clinical utility of ultrasensitive ctDNA monitoring in immunotherapy-treated cancer patients.
DOI: 10.15468/dl.fkdw7r
title: Occurrence Download

description: A dataset containing 232 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micrathyria spinifera"
 ]
}

 The dataset includes 232 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010180-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8nzrvq
title: Occurrence Download

description: A dataset containing 10601284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Amphibia)"
 ]
}

 The dataset includes 10601284 records from 7873 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010165-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbdtuu
title: Occurrence Download

description: A dataset containing 7739 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Quercus acutissima)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7739 records from 188 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001691-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7f7prk
title: Occurrence Download

description: A dataset containing 648 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Espeletia murilloi Cuatrec."
 ]
}

 The dataset includes 648 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0255187-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b482k2
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bulbophyllum interpositum J.J.Verm., Schuit. & de Vogel"
 ]
}

 The dataset includes 21 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002894-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112050523
title: P.Oxy.VII 1030 Notification of Death, P.Oxy.VII 1030

description: [Text Description:] Notice of the death of a slave. ❧ [Text or Publication Number Note:] P.Oxy.VII 1030, P.Oxy. 1030, Spurlock 1914.21.0017 ❧ [Excavation Description:] Excavated by archaeologists, including Bernard Pyne Grenfell and Arthur Surridge Hunt, at an ancient rubbish dump near Oxyrhynchus in Egypt (28°32'N 30°40'E, modern el-Bahnasa). ❧ [Medium:] Papyrus ❧ [Script Note:] Greek ❧ [Physical Object Description:] Papyrus manuscript, 26.2 x 9.6 cm.
DOI: 10.25549/inscriptifact-ouc112050583
title: P.Oxy.VII 1030 Notification of Death, P.Oxy.VII 1030

description: [Text Description:] Notice of the death of a slave. ❧ [Text or Publication Number Note:] P.Oxy.VII 1030, P.Oxy. 1030, Spurlock 1914.21.0017 ❧ [Excavation Description:] Excavated by archaeologists, including Bernard Pyne Grenfell and Arthur Surridge Hunt, at an ancient rubbish dump near Oxyrhynchus in Egypt (28°32'N 30°40'E, modern el-Bahnasa). ❧ [Medium:] Papyrus ❧ [Script Note:] Greek ❧ [Physical Object Description:] Papyrus manuscript, 26.2 x 9.6 cm.
DOI: 10.25549/inscriptifact-ouc112050621
title: P.Oxy.VII 1030 Notification of Death, P.Oxy.VII 1030

description: [Text Description:] Notice of the death of a slave. ❧ [Text or Publication Number Note:] P.Oxy.VII 1030, P.Oxy. 1030, Spurlock 1914.21.0017 ❧ [Excavation Description:] Excavated by archaeologists, including Bernard Pyne Grenfell and Arthur Surridge Hunt, at an ancient rubbish dump near Oxyrhynchus in Egypt (28°32'N 30°40'E, modern el-Bahnasa). ❧ [Medium:] Papyrus ❧ [Script Note:] Greek ❧ [Physical Object Description:] Papyrus manuscript, 26.2 x 9.6 cm.
DOI: 10.15468/dl.h685dg
title: Occurrence Download

description: A dataset containing 21253047 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 21253047 records from 5283 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236130-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15302715
title: Python Scripts and Forecasted Data (2018-2023) for Daily Arctic Sea Ice Concentration Forecasting

description: 1. Data Description

The data include both codes, forecasted and observed Arctic SIC. The forecasted data, contains the forecasted SIC from January, 1, 2018 to December, 31, 2023.

2. SIC data



Forecasted Data:



Temporal Coverage: January 1, 2018, to December 31, 2023.

 Data Formats: GeoTIFF format.






Projection System: Northern Polar Stereographic.

Spatial Resolution: 6.25 km.


3. code



Data Formats: py format.

Function:





SIC_plot.py: Visualizes sea ice concentration using NetCDF data, applying a polar stereographic projection, custom colormap, and land/coastline features for better geographic context.  




SIM_plot.py: Compares forecasted and observed sea ice margin using binary segmentation, erosion, and contour extraction, overlaying results on a polar stereographic map with land masking.


SIC_forecast.py: Implements long-term sea ice concentration forecasting by combining Least Squares (LS) trend modeling with an AutoRegressive (AR) model for residual correction. LS fits a quadratic trend with periodic components, while AR captures temporal dependencies in residuals, improving forecast accuracy. The method extrapolates future SIC values by predicting both trend and residual components.
DOI: 10.5281/zenodo.15302716
title: Python Scripts and Forecasted Data (2018-2023) for Daily Arctic Sea Ice Concentration Forecasting

description: 1. Data Description

The data include both codes, forecasted and observed Arctic SIC. The forecasted data, contains the forecasted SIC from January, 1, 2018 to December, 31, 2023.

2. SIC data



Forecasted Data:



Temporal Coverage: January 1, 2018, to December 31, 2023.

 Data Formats: GeoTIFF format.






Projection System: Northern Polar Stereographic.

Spatial Resolution: 6.25 km.


3. code



Data Formats: py format.

Function:





SIC_plot.py: Visualizes sea ice concentration using NetCDF data, applying a polar stereographic projection, custom colormap, and land/coastline features for better geographic context.  




SIM_plot.py: Compares forecasted and observed sea ice margin using binary segmentation, erosion, and contour extraction, overlaying results on a polar stereographic map with land masking.


SIC_forecast.py: Implements long-term sea ice concentration forecasting by combining Least Squares (LS) trend modeling with an AutoRegressive (AR) model for residual correction. LS fits a quadratic trend with periodic components, while AR captures temporal dependencies in residuals, improving forecast accuracy. The method extrapolates future SIC values by predicting both trend and residual components.
DOI: 10.60712/si-id389261.1
title: StrainInfo SI-ID 389261.1

description: StrainInfo dataset 389261 about a strain of Campylobacter fetus subsp. fetus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.69kkkc
title: Occurrence Download

description: A dataset containing 432 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1921-2020",
 "HasCoordinate is true",
 "TaxonKey is Populus simonii Carrière",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 432 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075587-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id389262.1
title: StrainInfo SI-ID 389262.1

description: StrainInfo dataset 389262 about a strain of Canicola haemoglobinophilus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id389263.1
title: StrainInfo SI-ID 389263.1

description: StrainInfo dataset 389263 about a strain of Actinobacillus lignieresii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id389264.1
title: StrainInfo SI-ID 389264.1

description: StrainInfo dataset 389264 about a strain of Bordetella parapertussis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id387488.1
title: StrainInfo SI-ID 387488.1

description: StrainInfo dataset 387488 about a strain of Halarchaeum salinum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id387502.1
title: StrainInfo SI-ID 387502.1

description: StrainInfo dataset 387502 about a strain of Paenibacillus typhae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id387508.1
title: StrainInfo SI-ID 387508.1

description: StrainInfo dataset 387508 about a strain of Natronoarchaeum philippinense. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id388204.1
title: StrainInfo SI-ID 388204.1

description: StrainInfo dataset 388204 about a strain of Bosea lathyri. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.0tovp1
title: Occurrence Download

description: A dataset containing 583 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Puya nitida Mez"
 ]
}

 The dataset includes 583 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002462-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a6cqfr
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gaultheria vaccinoides Griseb. ex Wedd., 1860"
 ]
}

 The dataset includes 180 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002286-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id388205.1
title: StrainInfo SI-ID 388205.1

description: StrainInfo dataset 388205 about a strain of Bosea robiniae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id388206.1
title: StrainInfo SI-ID 388206.1

description: StrainInfo dataset 388206 about a strain of Listeria fleischmannii subsp. fleischmannii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id388207.1
title: StrainInfo SI-ID 388207.1

description: StrainInfo dataset 388207 about a strain of Algimonas porphyrae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id389265.1
title: StrainInfo SI-ID 389265.1

description: StrainInfo dataset 389265 about a strain of Corynebacterium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id389266.1
title: StrainInfo SI-ID 389266.1

description: StrainInfo dataset 389266 about a strain of Acinetobacter haemolyticus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.68z1mf
title: Occurrence Download

description: A dataset containing 52285660 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 52285660 records from 777 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015996-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id389267.1
title: StrainInfo SI-ID 389267.1

description: StrainInfo dataset 389267 about a strain of Acinetobacter johnsonii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id387509.1
title: StrainInfo SI-ID 387509.1

description: StrainInfo dataset 387509 about a strain of Oceanibacterium hippocampi. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.4avek9
title: Occurrence Download

description: A dataset containing 488 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Oleandraceae"
 ]
}

 The dataset includes 488 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086192-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m6inih
title: Occurrence Download

description: A dataset containing 630 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Allotropa Torr. & A.Gray ex A.Gray"
 ]
}

 The dataset includes 630 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056829-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id387511.1
title: StrainInfo SI-ID 387511.1

description: StrainInfo dataset 387511 about a strain of Pseudonocardia. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id387534.1
title: StrainInfo SI-ID 387534.1

description: StrainInfo dataset 387534 about a strain of Tenacibaculum xiamenense. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.