cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.hd5vrm
title: Occurrence Download

description: A dataset containing 1006684 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is CC-BY 4.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Icterus galbula (Linnaeus, 1758)",
 "Year 2020-2023"
 ]
}

 The dataset includes 1006684 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000190-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-975
title: Measuring job performance success for female officers of the LAPD, 1983

description: Kenneth G. Hickman. Measuring job performance success for female officers of the Los Angeles Police Department. Claremont, California: Claremont Graduate School (PhD dissertation), 1983.
DOI: 10.15468/dl.merrfu
title: Occurrence Download

description: A dataset containing 1261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campylopus introflexus (Hedw.) Brid.",
 "Geometry POLYGON((112 -59,112 1,180 1,180 -59,112 -59))",
 "HasGeospatialIssue is false",
 "BasisOfRecord is Specimen",
 "Year 1990-2020"
 ]
}

 The dataset includes 1261 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003281-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s45mn3
title: Occurrence Download

description: A dataset containing 11382 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leptoclinus maculatus (Fries, 1838)"
 ]
}

 The dataset includes 11382 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050337-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pyutgn
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myotis keaysi J.A.Allen, 1914",
 "Country is Colombia"
 ]
}

 The dataset includes 63 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003281-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-800
title: NCJRS custom search "Policewomen", 1991

description: Results of NCJRS search on Policewomen. PART OF A SERIES: Graham & James collected research materials pertaining to the role of gender in policing. Included in the series are academic journal articles, working papers, reports, and a dissertation regarding the role and performance of female police officers. Also included is the firm's correspondence. Most materials in the series are derived from academic sources.
DOI: 10.15468/dl.tttkf6
title: Occurrence Download

description: A dataset containing 13582862 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Russian Federation"
 ]
}

 The dataset includes 13582862 records from 3114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000629-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26747555
title: Additional file 7 of A dual RNA-seq analyses revealed dynamic arms race during the invasion of walnut by Colletotrichum gloeosporioides

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.26756425.v1
title: Additional file 2 of Metastasis and basement membrane-related signature enhances hepatocellular carcinoma prognosis and diagnosis by integrating single-cell RNA sequencing analysis and immune microenvironment assessment

description: Supplementary Material 2: Fig. S2. (A-L) Kaplan-Meier curves for each prognostic gene
DOI: 10.5281/zenodo.13333074
title: Emden Neue Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.13333078
title: Emlichheim Neue Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.13333035
title: Analysis of Public Short-Read RNA-Sequencing Data: PRJNA543316

description: PRJNA543316

Metformin is a front-line drug in the treatment of type-2 diabetes mellitus (T2DM). In addition to its antigluconeogenic and insulin-sensitizing properties, it has emerged as a potent inhibitor of the inflammatory response of macrophages. Specifically, metformin has been shown to reduce transcript levels of Il1b, the gene encoding the pro-inflammatory cytokine interleukin (IL)-1b, during long-term exposure of macrophages to the bacterial cell-wall component lipopolysaccharide (LPS). However, the extent to which metformin affects the early transcriptional response to LPS has never been investigated. Here, we show that metformin affects transcript levels of a large yet selective subset of LPS-responsive genes after only two hours of LPS exposure, mostly counteracting the effect of LPS rather than enhancing it. The affected genes are implicated in a variety of biological functions, in particular cellular movement and trafficking. Intriguingly, metformin affects transcript levels of Il1b at this early time point as well, but through a molecular mechanism fundamentally different from the regulation observed after longer exposure. While down-regulation of Il1b by metformin during the late stages of the LPS response has been shown to rely on stabilization of hypoxia-inducible factor (HIF)-1α and production of IL-10, Il1b inhibition at the early stage requires AMP-activated protein kinase (AMPK) activation but is independent of HIF-1α and IL-10. These results reveal an unexpected complexity in the anti-inflammatory properties of metformin and demonstrate that Il1b is down-regulated by distinct mechanisms in the early and late stages of the LPS response. Overall design: Bone-marrow-derived macrophages from WT C57Bl/6 mice were either left untreated, stimulated with 100 ng/ml LPS for 2 h or pretreated with 5 mM metformin for 6 h and then stimulated with 100 ng/ml LPS for 2 h.

Pipeline: FastQ -> FastQC -> fastp -> STAR -> samtools -> multiQC
DOI: 10.5281/zenodo.13333036
title: Analysis of Public Short-Read RNA-Sequencing Data: PRJNA543316

description: PRJNA543316

Metformin is a front-line drug in the treatment of type-2 diabetes mellitus (T2DM). In addition to its antigluconeogenic and insulin-sensitizing properties, it has emerged as a potent inhibitor of the inflammatory response of macrophages. Specifically, metformin has been shown to reduce transcript levels of Il1b, the gene encoding the pro-inflammatory cytokine interleukin (IL)-1b, during long-term exposure of macrophages to the bacterial cell-wall component lipopolysaccharide (LPS). However, the extent to which metformin affects the early transcriptional response to LPS has never been investigated. Here, we show that metformin affects transcript levels of a large yet selective subset of LPS-responsive genes after only two hours of LPS exposure, mostly counteracting the effect of LPS rather than enhancing it. The affected genes are implicated in a variety of biological functions, in particular cellular movement and trafficking. Intriguingly, metformin affects transcript levels of Il1b at this early time point as well, but through a molecular mechanism fundamentally different from the regulation observed after longer exposure. While down-regulation of Il1b by metformin during the late stages of the LPS response has been shown to rely on stabilization of hypoxia-inducible factor (HIF)-1α and production of IL-10, Il1b inhibition at the early stage requires AMP-activated protein kinase (AMPK) activation but is independent of HIF-1α and IL-10. These results reveal an unexpected complexity in the anti-inflammatory properties of metformin and demonstrate that Il1b is down-regulated by distinct mechanisms in the early and late stages of the LPS response. Overall design: Bone-marrow-derived macrophages from WT C57Bl/6 mice were either left untreated, stimulated with 100 ng/ml LPS for 2 h or pretreated with 5 mM metformin for 6 h and then stimulated with 100 ng/ml LPS for 2 h.

Pipeline: FastQ -> FastQC -> fastp -> STAR -> samtools -> multiQC
DOI: 10.5281/zenodo.13333088
title: Emmendingen Stadt-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15468/dl.7as37k
title: Occurrence Download

description: A dataset containing 311 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.695143 -34.462318, 148.695143 -34.469055, 148.704126 -34.469055, 148.704126 -34.466809, 148.699634 -34.466809, 148.699634 -34.462318, 148.695143 -34.462318))"
 ]
}

 The dataset includes 311 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071423-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26747537.v1
title: Additional file 1 of A dual RNA-seq analyses revealed dynamic arms race during the invasion of walnut by Colletotrichum gloeosporioides

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26747555.v1
title: Additional file 7 of A dual RNA-seq analyses revealed dynamic arms race during the invasion of walnut by Colletotrichum gloeosporioides

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.26747549.v1
title: Additional file 5 of A dual RNA-seq analyses revealed dynamic arms race during the invasion of walnut by Colletotrichum gloeosporioides

description: Supplementary Material 5
DOI: 10.34740/kaggle/dsv/9190198
title: ⏳ endoflife.date database (duckdb)
DOI: 10.6084/m9.figshare.26410651
title: Supplementary Material for: Accelerated linear growth during Erdafitinib treatment: An FGFR related, but growth factor and sex steroid independent mechanism?

description: Introduction:
Growth acceleration during postnatal growth only occurs during puberty as a physiological event and during catch-up growth mediated by growth promoting therapies in growth disorders. Here we report on novel observations on skeletal symptoms during treatment with Erdafitinib, a tyrosine kinase inhibitor (TKI) prescribed on the basis of a compassionate-use program.

Methods:
Analysis of anthropometric, biochemical, clinical and radiographic data of patients with CNS tumors who revealed an unanticipated growth spurt with initiation of therapy with Erdafitinib was performed retrospectively.

Results:
Linear growth acceleration was independent of sex steroids and IGF1 levels, which is especially remarkable in the context of heavily pretreated pediatric neuro-oncology patients with severe growth impairment before initiation of therapy. Growth acceleration was accompanied by distinct widening of the growth plate and enhanced metaphyseal mineralization shortly after the start of TKI therapy.

Conclusions:
While targeted therapies including TKIs have become an essential part in adult cancer treatment, applications in children are still limited. Off-target effects specific to the pediatric population have been observed in various organ systems, however knowledge about the effect of TKIs on the growing skeleton is scarce. As treatment with Erdafitinib inhibits FGFR3-mediated effects and thus represents a very logical hypothetical framework of growth factor and sex steroid independent growth acceleration.
DOI: 10.6084/m9.figshare.26751131.v1
title: Additional file 1 of In-depth phosphoproteomic profiling of the insulin signaling response in heart tissue and cardiomyocytes unveils canonical and specialized regulation

description: Supplementary Table S1. List of phosphopeptides quantified upon acute insulin stimulation in murine cardiac tissue. Results of functional enrichment analyses.
DOI: 10.15468/dl.2a723e
title: Occurrence Download

description: A dataset containing 231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Myanmar)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron haematodes Franch."
 ]
}

 The dataset includes 231 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071424-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26756386.v1
title: Additional file 1 of PARP-1, EpCAM, and FRα as potential targets for intraoperative detection and delineation of endometriosis: a quantitative tissue expression analysis

description: Supplementary Material 1: Additional file 1. Percentage of PARP-1 positive cells in both the lesion and the surrounding tissue, classified as either strong or normal. The quantitative analysis was performed by Nuclear v9 algorithm. Normal positivity: signal intensity threshold 188; strong positivity: signal intensity threshold 162.
DOI: 10.15468/dl.cuf9e3
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.99608 -34.446597, 148.99608 -34.451089, 148.998326 -34.451089, 148.998326 -34.460072, 149.002817 -34.460072, 149.002817 -34.462318, 148.998326 -34.462318, 148.998326 -34.469055, 149.002817 -34.469055, 149.002817 -34.466809, 149.005063 -34.466809, 149.005063 -34.462318, 149.009554 -34.462318, 149.009554 -34.45558, 149.005063 -34.45558, 149.005063 -34.451089, 149.009554 -34.451089, 149.009554 -34.446597, 148.99608 -34.446597))"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071425-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26747612.v1
title: Additional file 3 of Analysis and mapping of harm reduction research in the context of injectable drug use: identifying research hotspots, gaps and future directions

description: Supplementary Material 3:Supplement 3. Top 50 cited articles
DOI: 10.5281/zenodo.13137707
title: Data for Partial Volume Deflagration Experiments with Synthesized Lithium-Ion Battery Thermal Runaway Effluent Gas.

description: Refer to Readme.pdf or Readme.md for information on this dataset.v1.1 - cleanupv1.2 - readme updates
DOI: 10.5281/zenodo.13333118
title: Data for Partial Volume Deflagration Experiments with Synthesized Lithium-Ion Battery Thermal Runaway Effluent Gas.

description: Refer to Readme.pdf or Readme.md for information on this dataset.v1.1 - cleanupv1.2 - readme updates
DOI: 10.6084/m9.figshare.26751778
title: Additional file 2 of Biocontrol performance and mass production potential of the larval endoparasitoid Campoletis chlorideae Uchida (Hymenoptera: Ichneumonidae) against the fall armyworm, Spodoptera frugiperda (J. E. Smith) (Lepidoptera: Noctuidae)

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26751694
title: Additional file 1 of Transcriptomic and metabolic changes in Trichoderma reesei caused by mutation in xylanase regulator 1 (xyr1)

description: Additional file 1.
DOI: 10.6084/m9.figshare.26751694.v1
title: Additional file 1 of Transcriptomic and metabolic changes in Trichoderma reesei caused by mutation in xylanase regulator 1 (xyr1)

description: Additional file 1.
DOI: 10.6084/m9.figshare.26747633.v1
title: Additional file 2 of A longitudinal evaluation of oxidative stress - mitochondrial dysfunction - ferroptosis genes in anthracycline-induced cardiotoxicity

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26747681
title: Additional file 9 of Unmutated RRAS2 emerges as a key oncogene in post-partum-associated triple negative breast cancer

description: Supplementary Material 9.
DOI: 10.6084/m9.figshare.26747684.v1
title: Additional file 10 of Unmutated RRAS2 emerges as a key oncogene in post-partum-associated triple negative breast cancer

description: Supplementary Material 10.
DOI: 10.6084/m9.figshare.26747612
title: Additional file 3 of Analysis and mapping of harm reduction research in the context of injectable drug use: identifying research hotspots, gaps and future directions

description: Supplementary Material 3:Supplement 3. Top 50 cited articles
DOI: 10.6084/m9.figshare.26747615.v1
title: Additional file 4 of Analysis and mapping of harm reduction research in the context of injectable drug use: identifying research hotspots, gaps and future directions

description: Supplementary Material 4:Supplement 4. Top 50 recently published articles
DOI: 10.6084/m9.figshare.26749544.v1
title: Additional file 6 of COPD, PRISm and lung function reduction affect the brain cortical structure: a Mendelian randomization study

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.26749631.v1
title: Additional file 6 of PCSK9 inhibitors and osteoporosis: mendelian randomization and meta-analysis

description: Supplementary Material 6
DOI: 10.15468/dl.qnv4zs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.018538 -34.462318, 149.018538 -34.466809, 149.025275 -34.466809, 149.025275 -34.462318, 149.018538 -34.462318))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071427-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26749553
title: Additional file 9 of COPD, PRISm and lung function reduction affect the brain cortical structure: a Mendelian randomization study

description: Supplementary Material 9.
DOI: 10.5281/zenodo.13333133
title: Bad Ems Apotheke Am Kursaal (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15468/dl.d3s2yx
title: Occurrence Download

description: A dataset containing 2140 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cimex lectularius Linnaeus, 1758"
 ]
}

 The dataset includes 2140 records from 134 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071426-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26747678
title: Additional file 8 of Unmutated RRAS2 emerges as a key oncogene in post-partum-associated triple negative breast cancer

description: Supplementary Material 8.
DOI: 10.5281/zenodo.13333145
title: Emsbüren Hirsch-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.6084/m9.figshare.26756497
title: Additional file 7 of CRISPR-Cas9 knockout screen informs efficient reduction of the Komagataella phaffii secretome

description: Additional file 7. Plasmid sequences used in this study.
DOI: 10.6084/m9.figshare.26749562.v1
title: Additional file 12 of COPD, PRISm and lung function reduction affect the brain cortical structure: a Mendelian randomization study

description: Supplementary Material 12.