cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15482/usda.adc/1529414
title: Agronomic Calendars for the Bushland, Texas Sorghum Datasets

description: This dataset consists of agronomic calendars for each growing season (year) when sorghum [Sorghum bicolor (L.)] was grown for grain or forage at the USDA-ARS Conservation and Production Laboratory (CPRL), Soil and Water Management Research Unit (SWMRU) research weather station, Bushland, Texas (Lat. 35.186714°, Long. -102.094189°, elevation 1170 m above MSL). Sorghum was grown in 1987, 1988, 1991, 1993, 1997 through 1999, 2003 through 2007, 2014, and 2015. Depending on experimental objectives, sorghum was grown on one, two, or four large, precision weighing lysimeters, each in the center of a 4.44 ha square field. The four fields were contiguous. The fields were designated northeast (NE), southeast (SE), northwest (NW), and southwest (SW), and were themselves arranged in a larger square with the fields in four adjacent quadrants of the larger square. In 2003 and 2004, cotton was grown on only one large weighing lysimeter in rotation with sorghum. In 2015, the NE and SE fields were irrigated with subsurface drip lines and the NW and SW fields were irrigated with a linear move sprinkler. Irrigation was by linear move sprinkler system in 1987 through 2007. Sorghum was sometimes grown as a dryland crop, sometimes as a fully irrigated crop, and sometimes as a deficit irrigated crop. Irrigations designated as full were managed to replenish soil water used by the crop on a weekly or more frequent basis as determined by soil profile water content readings made with a neutron probe to 2.4-m depth in the field. Irrigations designated as deficit typically involved full irrigation to establish the crop. A crop calendar for each season lists by date the pertinent agronomic and maintenance operations (e.g., planting, thinning, fertilization, pesticide application, lysimeter maintenance, harvest). For each season there is one crop calendar for each two lysimeters (NE and SE, and/or NW and SW).
    These datasets originate from research aimed at determining crop water use (ET), crop coefficients for use in ET-based irrigation scheduling based on a reference ET, crop growth, yield, harvest index, and crop water productivity as affected by irrigation method, timing, amount (full or some degree of deficit), agronomic practices, cultivar, and weather. Prior publications have focused on ET, crop coefficients, and crop water productivity. Crop coefficients have been used by ET networks. The data have utility for testing simulation models of crop ET, growth, and yield and have been used for testing, and calibrating models of ET that use satellite and/or weather data.
See the README for descriptions of each data file.
DOI: 10.17632/75smfhgwkc
title: Data for: Can Venous Blood Samples Be Used For Apnea Challenge Test in Determination of Death By Neurological Criteria in Children?

description: Comparing the rise of venous pCO2 to that of arterial pCO2 during apnea challenge test
DOI: 10.4121/uuid:3f38f494-e9a5-447f-af2c-500544999294
title: Aircraft Disruption Management Case Studies

description: This dataset contains data from the case studies used in the Robust Test in the "Dynamic Aircraft Recovery Problem - An Operational Decision Support Framework" published in the Computers & Operations Research Journal in 2020.
DOI: 10.6084/m9.figshare.12931220.v1
title: Heat shock and control data

description: These are SIFTER gel images of GFP-actin F-actin and G-actin separations of cells exposed to heat shock (HS) or control (CTRL) conditions.
DOI: 10.6084/m9.figshare.1522638.v18
title: I'm Cited, Therefore I Am! Interview Transcripts

description: This is a set of qualitative data. Biographical interviews were conducted with 10 academic scientists working at two universities in London. The interviews focused on their decision to pursue science as a career, their publishing practices, and their thoughts on Open Access publishing. Interviewees occupied various positions within the academic career ladder ranging from PhD students to senior Professors, and work in a variety of scientific fields.
DOI: 10.17632/pjxyjpdyyk
title: Data for: Look at me: The relation between empathy and fixation on the emotional eye-region in low vs. high social anxiety
DOI: 10.6084/m9.figshare.12287096.v1
title: Faruk Gudzevic - Basics of C# programming Certificate "Winter Coding School 2020"

description: Faruk Gudzevic - Basics of C# programming Certificate "Winter Coding School 2020"
DOI: 10.6084/m9.figshare.5236006.v2
title: Hesselmann 2017 (CFS priming data)

description: Data and R code from CFS priming experiments.<br>
DOI: 10.6084/m9.figshare.9816326.v1
title: Automobiles - Ebay Master Vehicle List - Revised

description: Data set of automobile makes, models and year of production for all car models listed on the Ebay Master Vehicle LIst as of July 2019. This data set has been altered to remove unnecessary fields and include the nation and continent where the car manufacturer is located. The field labeld "diff" indicates the number of years difference between production years of car models.
DOI: 10.17632/b6t6s24v6d
title: Nitrate Dynamics in the Kurobe River Alluvial Fan Groundwater, Japan: Insights for Sustainable Coastal Nutrient Management

description: This dataset contains original hydrochemical data collected for the study titled “Nitrate Dynamics in the Kurobe River Alluvial Fan Groundwater, Japan.” It includes detailed information on sample locations, various hydrochemical parameters, and associated data used in the analysis of nitrate dynamics within the aquifer system.

Data Features: 

Location Information: Geographic coordinates and descriptors of sampling sites within the Kurobe River alluvial fan.
Hydrochemical Data: Measurements of key hydrochemical parameters, including nitrate levels, pH, conductivity, and other relevant indicators that inform nitrogen balance management.
Purpose:
The dataset aims to provide researchers with comprehensive data for further analysis and to promote transparency in the research findings published in the associated manuscript.

Usage:
This data can be utilized for further studies on nitrogen management, water quality assessment, and hydrological modeling in coastal environments.

File Format:
The data is provided in an Excel spreadsheet format (.xlsx) for ease of access and analysis.
DOI: 10.6084/m9.figshare.17041562.v1
title: AppendixC_CT_outputs.rar

description: Circuit Theory Outputs
DOI: 10.6084/m9.figshare.22691197.v2
title: Untitled Item

description: The MIDOG++ dataset represents an extension of the data set used in the MIDOG 2021 and 2022 challenges. We provide region of interest images from 503 histological specimens of seven different tumor types with variable morphology: breast carcinoma, lung carcinoma, lymphosarcoma, neuroendocrine tumor, cutaneous mast cell tumor, cutaneous melanoma, and (sub)cutaneous soft tissue sarcoma. The human and canine samples were processed and stained at different human and veterinary pathology laboratories with standard H&E dye and digitized with different digital whole slide image scanners. We provide labels for 11,937 mitotic figures that have been differentiated against 14,351 imposter cells in a blinded consensus by two pathologists and a final decision by a third pathologist for disagreed labels.
DOI: 10.6084/m9.figshare.25330651.v1
title: S1 Data.xlsx

description: Research Data.
DOI: 10.6084/m9.figshare.27872181.v1
title: CL-R Salmonella isolates

description: <b>Genome analysis of colistin- resistant Salmonella isolates from human source in Guizhou of South western China</b>
DOI: 10.6084/m9.figshare.28691561.v2
title: PVAC: Package Version Activity Categorizer, Leveraging Semantic Versioning in a Heterogeneous System

description: <b>Context: </b>Modern open-source software ecosystems, such as those managed by GNU/Linux distributions, are composed of numerous packages developed independently by diverse communities. These ecosystems employ package management tools to facilitate software installation and dependency resolution. However, these tools lack robust mechanisms for systematically evaluating the development activity and versioning dynamics within their heterogeneous software environments.<br><b>Objective:</b> This research aims to introduce a systematic method and a prototype tool for assessing version activity within heterogeneous package manager ecosystems, enabling quantitative analysis of software package updates.<br><b>Method:</b> We developed PVAC,a <b>P</b>ackage <b>V</b>ersion<b> </b><b>A</b>ctivity <b>C</b>ategorizer, a novel approach<br>that leverages semantic versioning to surface the activity of software packages at both the system level using the Version Number Delta (VND) metric and at the package level using the Activity Categorizer. PVAC utilizes tailored regular expressions to parse semantic versioning details (epoch, major, minor, and patch versions) from diverse package version strings, thereby enabling consistent categorization and quantitative scoring of version changes.<br><b>Results</b>: PVAC was empirically evaluated using a dataset of 22,535 packages drawn from<br>recent releases of Debian and Ubuntu GNU/Linux distributions. Our findings<br>demonstrate PVAC's effectiveness for accurately categorizing versioning schemes and quantitatively measuring version activity across releases. We provide empirical evidence confirming that semantic versioning, including adapted variations, is predominantly employed across these ecosystems.<br><b>Conclusions</b>: PVAC represents an effective solution for systematically assessing and<br>monitoring the software package version activity within heterogeneous ecosystems. By providing clear metrics for software activity, PVAC aids practitioners and researchers in identifying packages requiring attention, thereby reducing security risks and technical debt.
DOI: 10.17632/99c4cfdksc
title: Decent Work and Innovative Work Behavior

description: This dataset is the online supplemental material of the article "Decent Work and Innovative Work Behavior: Mediating Roles of Work Engagement, Intrinsic Motivation, and Job Self-efficacy", which finds that decent work (DW) stimulates innovative work behavior (IWB) through complete mediation of work engagement (WE), with intrinsic motivation (IM) and job self-efficacy (JSE) partially mediating the relationship between DW and WE. The dataset includes the following parts: (1) The SPSS file of the processed dataset as input of all the empirical work, named as "DW and IWB Dataset". The dataset contains 517 supervisor-employee dyads colleted from 19 independent business units under a large state holding company group in Beijing, with scale items of DW, IM, JSE, and WE rated by employee themselves and IWB rated by employees' supervisors (see "Procedures and Samples" section in the article for details). Variables are named as their abbreviations in the article. numbers after each variable name represent the scale item numbers of the variable (e.g. JSE3 represents the 3rd item of job self-efficacy scale). (2) The file folder named as "DW measurement model", containing the AMOS files of the measurement model of decenk work, measuring decent work as a 2nd order 7-dimension construct. There are two measurement models provided, one being modified by allowing error terms of the same dimension intercorrelated to improve goodness of fit (see "Measures" section in the article for details). (3) The file folder named as "SEM Amos files_overall effects", containing the AMOS files of the structural equation models presenting the hypothesized relationships among DW, IM, JSE, WE, and IWB. These files are supporting material to the "Hypotheses Testing" section of the article. There are 4 path diagrams provided, corresponding to the hypothesized model (named as "DW on IWB") and the 3 alternative models. There is also a user-defined estimand file associated with the hypothesized model, for estimating the effect sizes (and their bias-corrected confidence intervals) of the defined paths. (4) The file foler named as "SEM Amos files_dimension specific effects", containing the AMOS files of the structural equation models presenting the hypothesized relationships among each dimension of DW and other study variables. These files are supporting material to the "Supplementary Analysis on the Dimension-specific Effects" section of the article. There are 7 path diagrams provided, corresponding to the 7 dimeansions of DW. There are also user-defined estimand file associated with each path diagram, for estimating the effect sizes (and their bias-corrected confidence intervals) of the defined paths.
DOI: 10.17632/bcbptkrbsg
title: GoogleEarthEngine_ImageFusion

description: Code to perform ESTARFM-like image fusion on Google Earth Engine. See the README.txt for additional details.
DOI: 10.17632/fxj622bmzp
title: prevalence of psychological distress of fetting affected with monkeypox among health care professionals

description: Monkeypox has been neglected tropic disease of western and central Africa since the early 70s.during May 2022, an unprecedent outbreak of monkeypox has included most of European country as well as north and south America. To know the Prevalence of psychological distress of getting affected with monkey pox among health care professionals. An online cross-sectional survey among 380 health care professionals age between 18 to 60 year was done across the country. Questionnaire assessed the psychological distress, knowledge, and awareness among health care professionals. Total of 380 individuals participated in the study. Out of total 52% are male and 47.9% female. Out of total 21.3% are anxious when encounter the patient affected with monkeypox and 36.8% get scared during treatment of patient affected with monkeypox and 32.1% healthcare know the how monkeypox virus spread and 60% reported it spread through droplet of infected person. The study concluded that the knowledge is less about the monkeypox virus among health care professionals and also less psychological stress because of a smaller number of cases present across the country.
DOI: 10.17632/ym5kscj9sz
title: The victory project v1.0: An efficient parquet equations solver

description: Victory, i.e. vienna computational tool depository, is a collection of numerical tools for solving the parquet equations for the Hubbard model and similar many body problems. In the current release, we focus on the single-band 2D Hubbard model, based on which generalizations to non-local interactions, multi orbitals and other lattices are straightforward. The parquet formalism is a self-consistent theory at both the single- and two-particle levels, and can thus describe individual fermions as well as their collective behavior on equal footing. This is essential for the understanding of various emergent phases and their transitions in many-body systems, in particular for cases in which a single-particle description fails. Our implementation of victory is in modern Fortran and it fully respects the structure of various vertex functions in both momentum and Matsubara frequency space. We found the latter to be crucial for the convergence of the parquet equations, as well as for the correct determination of various physical observables. In this release, we thoroughly explain the program structure and the controlled approximations to efficiently solve the parquet equations, i.e. the two-level kernel approximation and the high-frequency regulation.
DOI: 10.6084/m9.figshare.19411187.v1
title: Systematized literature review IA & Communication

description: A systematized literature review based on 243 articles about the impact of artificial intelligence on the Communication field (journalism, public sphere, platforms, ethics and education). Based on articles published in journals indexed in Web of Science and Scopus (2017-2021).
DOI: 10.6084/m9.figshare.23864517.v1
title: Dataset for 'Vertical structure of buoyancy transport by ocean baroclinic turbulence', by Meunier, Miquel and Gallet, Geophysical Research Letters (2023).

description: The files are named following the Table in the Supporting Information of the article. Each file contains the mean meridional buoyancy flux profile, together with the vertical coordinate z.
DOI: 10.6084/m9.figshare.6280796.v1
title: Germond et al. 2018a-Raman & gene expression datasets.xlsx

description: This file include 2 datasets used in Germond et al. 2018<br><b>Biological samples</b>: Eleven E. coli strains described in Suzuki et al. 2014 Nature Communication. One strain is the parental strain MDS42 and 10 others are evolved strains that acquired a resistance against antibiotic drugs during a 3 month period of evolution. Cell lines are labelled according to the antibiotic drug they were evolved in.<b><br></b><b>1st dataset: </b>Raman spectral dataset of 624 independent populations of Escherichia coli measured 5 times each by Raman spectroscopy. Average data of the five measurements are presented. Measurements were performed using a 532 nm excitation wavelength using 5 sec exposure per measure.<br><b>2nd dataset: </b>Transcriptome data of E coli strains as measured by microarray. The log10-transformed expression levels after quantile normalization are presented. Genes for which the expression value was below 2.0 were removed, as recommended by the manufacturer, leaving 2613 genes (out of 4600+) in the dataset. <br>Please refer to Germond et al. 2018a Communication Biology when using this dataset. See the publication for the detailed measurement procedures.
DOI: 10.6084/m9.figshare.9713978.v2
title: South African amphibian species list

description: A checklist for amphibian species in South Africa
DOI: 10.17632/9c82ysxgbf
title: Dataset for 'Barcoded SARS-CoV-2 viruses define the impact of duration and route of exposure on the transmission bottleneck in a hamster model'

description: SARS-CoV-2’s transmission bottleneck remains poorly characterized, in part due to a lack of quantitative measurement tools. To address this, we adapted a SARS-CoV-2 reverse genetics system to generate a pool of &gt;200 isogenic SARS-CoV-2 viruses harboring specific 6-nucleotide barcodes inserted in ORF10, a non-translated ORF. We directly inoculated donor Syrian hamsters intranasally with this barcoded virus pool and exposed a paired naïve contact hamster to each donor. Following exposure, the nasal turbinates, trachea, and lungs were collected, viral titers were measured, and the number of barcodes in each tissue were enumerated to quantify the transmission bottleneck. The duration and route (airborne, direct contact, and fomite) of exposure were varied to assess their impact on the transmission bottleneck. Primarily, the dataset contains (1) fastq files from next-generation sequencing of a small amplicon that contains the barcode of our barcoded viruses and (2) associated count matrices showing how many of each barcode are present in each sample. Secondarily, RT-qPCR results measuring viral titers in various respiratory tissues are also included.
DOI: 10.6084/m9.figshare.12271265.v1
title: Supplementary Material for: Efficacy and Safety of Regional Anticoagulation with 4% Trisodium Citrate Versus Heparin in Extended Hemodialysis among Critical Patients with Cancer and Acute Kidney Injury

description: <b><i>Introduction:</i></b> Patients with cancer admitted to critical care units are at increased risk of being affected with acute kidney injury (AKI) and mortality. Sustained low-efficiency dialysis (SLED) combines the cardiovascular stability of continuous therapy with the operational facility of conventional hemodialysis (HD). Citrate has become an alternative to heparin in anticoagulation because it favors the maintenance of filter patency and reduces bleeding. We analyzed the efficacy and safety of citrate versus heparin use in extended HD for patients with cancer and AKI. <b><i>Methods:</i></b> This retrospective cohort study evaluated patients with cancer and dialytic AKI who received SLED with anticoagulation using citrate versus heparin from January 2014 to June 2017. After stratifying patients by the type of anticoagulation received, we evaluated demographic and clinical data, plus SLED session characteristics. We also analyzed dialysis outcomes, including insufficient session time, hypotension, poor catheter flow, line inversion, and dialysis system coagulation. <b><i>Results:</i></b> We identified 423 SLED sessions among 124 patients (41 patients in the heparin group and 83 patients in the citrate group). More sessions with citrate (26.6 vs. 40.9%, <i>p</i> &lt; 0.001) had serum platelet concentrations &lt;50,000/mm<sup>3</sup> or &lt;100,000/m<sup>3</sup> and ionic calcium (Ca<sup>++</sup>) values &lt;1.16 mmol/L (33.2 vs. 18.5%, <i>p</i> &lt; 0.001). Dialysis intercurrence occurred in 27% of sessions. The highest odds were associated with heparin sessions (OR 2.88). Compared with the citrate group, the heparin group was subject to more dialysis system coagulation (12.3%), the need for line reversal (9.8%), and insufficient session time (23.9%). <b><i>Conclusion:</i></b> Citrate represents a safe and effective anticoagulant for SLED for cancer patients with AKI undergoing treatment in the intensive care unit.
DOI: 10.6084/m9.figshare.28248101.v3
title: GloPPRUA-Global Harmonized Urban Definition

description: This data is the global urban boundary of 222 scenarios combined by different population data sets, population density and population size thresholds, and the GIS model builder for calculating these data. See the README file for details.Reference：Li, W., Zhang, Y., Li, M., & Long, Y. (2024). Rethinking the country-level percentage of population residing in urban area with a global harmonized urban definition. iScience, 27(6), 110125. https://doi.org/10.1016/j.isci.2024.110125.The UN (United Nations) collects global data on the country-level Percentage of Population Residing in Urban Area (PPRUA); however, variations in definitions of urban areas make these data incomparable across countries. This paper evaluates the numbers of national defined PPRUA within UN statistics, by comparing them with the numbers of PPRUA we estimated through global comparable definitions. Refer to the Degree of Urbanization framework from the UN, we propose 90 global harmonized methods to estimating PPRUA by combining different configurations of three global population datasets, six urban total population thresholds, and five urban population density thresholds. This approach demonstrated significant variations in country-level PPRUA estimations, with a wide 95% confidence interval (CI) range. When comparing the national defined PPRUA with the global harmonized estimations, we found that most lie between the upper 95% CI and the median of the estimations. This study highlights the need for globally harmonious PPRUA estimates, calling for a reassessment of datasets and thresholds in the future and investigating urbanization on a scale beyond the country level.<br>
DOI: 10.6084/m9.figshare.6818765.v1
title: Experiment 5F-SubjectE-160321-5St-SGLHand-HFREQ

description: Experiment in which subject performed motor imagery of a single hand's 5 finger motions, recorded using higher sampling rate setting of 1000 Hz.
DOI: 10.17632/gjn4vhwkxx
title: Replication for Trade Liberalization and Wages: Evidence from the Closer Economic Partnership Arrangement between Mainland China and Hong Kong

description: This replicate kit can be used to analyze the impact of tariff cuts on workers’ wages in a single labor market by examining the Closer Economic Partnership Arrangement (CEPA) trade liberalization, in which China unilaterally eliminated hundreds of tariffs on Hong Kong’s goods in 2004. We use the adoption of the CEPA as an external shock to examine the benefits of FTAs from the perspective of exporters. The basic method of identification involved the difference-in-differences (DID) approach. The data for empirical analysis is based on five Hong Kong censuses from 1996 to 2016. The replication kit contains a data availability statement, detailing the source and accessibility of the data used in the paper, as well as replication instructions. For a more detailed discussion, please see the published articles.