cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ad2afr
title: Occurrence Download

description: A dataset containing 64762 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Betula nana L.",
 "Year 1999-2015"
 ]
}

 The dataset includes 64762 records from 195 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023772-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fx5tx3
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes aegypti (Linnaeus, 1762)",
 "Country is Sri Lanka",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 113 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023774-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14192205
title: Basin-scale spatio-temporal development of glacial lakes in the Hindukush-Karakoram-Himalayas

description: This dataset offers detailed inventories of glacial lakes for the years 1990, 2000, 2010, and 2020 in the Hindu Kush Himalaya (HKH) region. Landsat satellite imagery was utilised to map glacial lakes, encompassing all lakes that are equal to or exceed 0.0036 km² in size.

In the latest inventory from 2020, we identified a total of 19,284 glacial lakes, encompassing a cumulative area of 1191.81 ± 209.21 km². The investigation encompasses comprehensive mapping at the sub-basin level over the whole study area, facilitating regional-scale evaluations of glacial lake distribution and expansion. The findings reveal a significant rise in glacial lakes over the last thirty years, with a 9.31% increase in the number of lakes and a 10.09% increase in total lake area within the HKH region.
DOI: 10.5281/zenodo.14192206
title: Basin-scale spatio-temporal development of glacial lakes in the Hindukush-Karakoram-Himalayas

description: This dataset offers detailed inventories of glacial lakes for the years 1990, 2000, 2010, and 2020 in the Hindu Kush Himalaya (HKH) region. Landsat satellite imagery was utilised to map glacial lakes, encompassing all lakes that are equal to or exceed 0.0036 km² in size.

In the latest inventory from 2020, we identified a total of 19,284 glacial lakes, encompassing a cumulative area of 1191.81 ± 209.21 km². The investigation encompasses comprehensive mapping at the sub-basin level over the whole study area, facilitating regional-scale evaluations of glacial lake distribution and expansion. The findings reveal a significant rise in glacial lakes over the last thirty years, with a 9.31% increase in the number of lakes and a 10.09% increase in total lake area within the HKH region.
DOI: 10.15468/dl.sjdxwg
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Artemisia apiacea Hance"
 ]
}

 The dataset includes 81 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023775-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.upb7zj
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes aegypti (Linnaeus, 1762)",
 "Country is Sri Lanka",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 113 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023776-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25459806
title: An Exploratory Data Analysis (EDA) Tool for Tracer Selection in Sediment and Pollution Fingerprinting Studies

description: Tracer selection is a critical step for any mixing model that uses the information of multiple variables to find the most likely solution for sediment or pollution source apportionment. The purpose of this work was to design an Exploratory Data Analysis (EDA) tool for qualitative and quantitative interpretation of tracer selection based on boxplots. This tool establishes a set of conditions presented as a decision tree to support the user in tracer selection decisions where current systems are either too statistically driven, which limits user interaction with the data, or rely too heavily on judgement and prior knowledge of tracer behaviour. This method extends upon the classical “range test” by incorporating a set of conditions and thresholds, creating a semi-quantitative method with a visual component to improve the tracer selection process and enable targeted consideration of geochemical behaviours for conservativism purposes. We present the results from experimental mixtures using the mixing model MixSIAR to demonstrate the method and illustrate the value of this approach for improved tracer selection. The tool, which is written in R, is freely available for use across a wide range of source apportionment applications.
DOI: 10.6084/m9.figshare.25459806.v1
title: An Exploratory Data Analysis (EDA) Tool for Tracer Selection in Sediment and Pollution Fingerprinting Studies

description: Tracer selection is a critical step for any mixing model that uses the information of multiple variables to find the most likely solution for sediment or pollution source apportionment. The purpose of this work was to design an Exploratory Data Analysis (EDA) tool for qualitative and quantitative interpretation of tracer selection based on boxplots. This tool establishes a set of conditions presented as a decision tree to support the user in tracer selection decisions where current systems are either too statistically driven, which limits user interaction with the data, or rely too heavily on judgement and prior knowledge of tracer behaviour. This method extends upon the classical “range test” by incorporating a set of conditions and thresholds, creating a semi-quantitative method with a visual component to improve the tracer selection process and enable targeted consideration of geochemical behaviours for conservativism purposes. We present the results from experimental mixtures using the mixing model MixSIAR to demonstrate the method and illustrate the value of this approach for improved tracer selection. The tool, which is written in R, is freely available for use across a wide range of source apportionment applications.
DOI: 10.6084/m9.figshare.24117968
title: Assessing the trade-offs in more nature-friendly mosquito control in the Upper Rhine region

description: Recent studies show that the widely used mosquito control agent Bti has more negative effects on nature than previously expected. However, it is not yet clear whether people support a more nature-friendly mosquito control, as such an adaptation could potentially lead to higher nuisance. This study explores this question by assessing the willingness to pay for an adapted mosquito control strategy that reduces the use of Bti, while maintaining nuisance protection within settlements. For this purpose, a Contingent Valuation Study was conducted in the German Upper Rhine Valley. The results show that the majority of the surveyed population attaches a high value to a more nature-friendly mosquito control in terms of willingness to pay and is willing to accept a higher nuisance outside the villages. Policy makers should, thus, foster the development and implementation of such more nature-friendly mosquito control strategies to increase both environmental and societal benefits.
DOI: 10.6084/m9.figshare.24117968.v1
title: Assessing the trade-offs in more nature-friendly mosquito control in the Upper Rhine region

description: Recent studies show that the widely used mosquito control agent Bti has more negative effects on nature than previously expected. However, it is not yet clear whether people support a more nature-friendly mosquito control, as such an adaptation could potentially lead to higher nuisance. This study explores this question by assessing the willingness to pay for an adapted mosquito control strategy that reduces the use of Bti, while maintaining nuisance protection within settlements. For this purpose, a Contingent Valuation Study was conducted in the German Upper Rhine Valley. The results show that the majority of the surveyed population attaches a high value to a more nature-friendly mosquito control in terms of willingness to pay and is willing to accept a higher nuisance outside the villages. Policy makers should, thus, foster the development and implementation of such more nature-friendly mosquito control strategies to increase both environmental and societal benefits.
DOI: 10.6084/m9.figshare.27866748
title: Predictive Accuracy of Polytopic Vector Analysis in Environmental Forensics: Sensitivity to Seeding Methods, Random Noise, and Sample Size

description: Although the sensitivity of receptor models to seeding methods, random noise, and sample size are frequently discussed in environmental forensics, a rigorous evaluation of these factors has been lacking. We generated 435,600 unique datasets with between two and seven sources of PCBs or PFAS that attempt to approximate real-world environmental datasets. Evaluation of these simulated datasets with PVA shows that EXRAWC and NNDSVD seeding methods converge more often and are typically more accurate when sources are similar to each other or are present in small proportions. The results also show that increasing sample sizes up to 25 samples can improve predictive accuracy.
DOI: 10.6084/m9.figshare.27866748.v1
title: Predictive Accuracy of Polytopic Vector Analysis in Environmental Forensics: Sensitivity to Seeding Methods, Random Noise, and Sample Size

description: Although the sensitivity of receptor models to seeding methods, random noise, and sample size are frequently discussed in environmental forensics, a rigorous evaluation of these factors has been lacking. We generated 435,600 unique datasets with between two and seven sources of PCBs or PFAS that attempt to approximate real-world environmental datasets. Evaluation of these simulated datasets with PVA shows that EXRAWC and NNDSVD seeding methods converge more often and are typically more accurate when sources are similar to each other or are present in small proportions. The results also show that increasing sample sizes up to 25 samples can improve predictive accuracy.
DOI: 10.6084/m9.figshare.27866760
title: Quantifying Subsurface Tar Volumes at Three Former Manufactured Gas Plants

description: Manufactured gas plants (MGPs) were a staple of the Industrial Revolution, operating in the US primarily on the East Coast, starting in the early 19th before phase-out in the mid-twentieth century. Their legacy includes the release of copious quantities of subsurface tar, and when located adjacent to waterways, tar in sediment due to direct discharge and leaking bulkheads. Computing the depth and extent of tar impacts is a three-dimensional problem required to facilitate appropriate remediation efforts. At three former MGPs, 306, 223, and 254 boreholes with 1452, 544, and 276 intervals were coded and %saturation attributed to saturated (<i>S<sub>n</sub></i> = 70%) and residual (<i>S</i><sub>Nr</sub> = 20%) tar. These data were incorporated into the 3-D krieging software EnviroInsite to estimate the spatial extent of tar and oil impacts and their affiliated volumes. At the former Citizens, Fulton, and Metropolitan MGPs, the model estimated a most probable volume (MPV) of 7.21, 4.36, and 0.8 million gallons of tar. As a sensitivity analysis, <i>S<sub>n</sub></i> was decreased to 60%, reducing the MPV to 6.3, 3.4, and 0.6 million gallons, respectively, Regardless, it is irrefutable that a large amount of tar remains in the subsurface ∼70 years after the facilities ceased operating.
DOI: 10.6084/m9.figshare.27866760.v1
title: Quantifying Subsurface Tar Volumes at Three Former Manufactured Gas Plants

description: Manufactured gas plants (MGPs) were a staple of the Industrial Revolution, operating in the US primarily on the East Coast, starting in the early 19th before phase-out in the mid-twentieth century. Their legacy includes the release of copious quantities of subsurface tar, and when located adjacent to waterways, tar in sediment due to direct discharge and leaking bulkheads. Computing the depth and extent of tar impacts is a three-dimensional problem required to facilitate appropriate remediation efforts. At three former MGPs, 306, 223, and 254 boreholes with 1452, 544, and 276 intervals were coded and %saturation attributed to saturated (<i>S<sub>n</sub></i> = 70%) and residual (<i>S</i><sub>Nr</sub> = 20%) tar. These data were incorporated into the 3-D krieging software EnviroInsite to estimate the spatial extent of tar and oil impacts and their affiliated volumes. At the former Citizens, Fulton, and Metropolitan MGPs, the model estimated a most probable volume (MPV) of 7.21, 4.36, and 0.8 million gallons of tar. As a sensitivity analysis, <i>S<sub>n</sub></i> was decreased to 60%, reducing the MPV to 6.3, 3.4, and 0.6 million gallons, respectively, Regardless, it is irrefutable that a large amount of tar remains in the subsurface ∼70 years after the facilities ceased operating.
DOI: 10.6084/m9.figshare.27862137
title: Summary statistics

description: Summary statistics of:Differential expression analysis (mRNA or microRNA)Gene set analysis (mRNA or microRNA)Pathway-based MPHL PRS association test with gene expression change (mRNA and microRNA combined, split by treatment group due to size)
DOI: 10.6084/m9.figshare.27866520
title: Supramolecular Large Nanosheets Assembled at Air/Water Interfaces and in Solution from Amphiphilic Heptagon-Containing Nanographenes.

description: Data set for the following paper: Supramolecular Large Nanosheets Assembled at Air/Water Interfaces and in Solution from Amphiphilic Heptagon-Containing Nanographenes. The Journal of Organic Chemistry 2024, 89, 163−173. (https://doi.org/10.1021/acs.joc.3c01854
DOI: 10.6084/m9.figshare.27866520.v1
title: Supramolecular Large Nanosheets Assembled at Air/Water Interfaces and in Solution from Amphiphilic Heptagon-Containing Nanographenes.

description: Data set for the following paper: Supramolecular Large Nanosheets Assembled at Air/Water Interfaces and in Solution from Amphiphilic Heptagon-Containing Nanographenes. The Journal of Organic Chemistry 2024, 89, 163−173. (https://doi.org/10.1021/acs.joc.3c01854
DOI: 10.60893/figshare.apl.27628983
title: Supporting Information

description: Calculated structural parameters, the relative energy and the symmetry of PE and FE phases, 2D transformation strain matrix from PE to FE states, and the structural evolution of FE-P0{degree sign} under uniaxial strain.
DOI: 10.15468/dl.xunmnk
title: Occurrence Download

description: A dataset containing 1019 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Artemisia argyi H.Lév. & Vaniot"
 ]
}

 The dataset includes 1019 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023780-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60893/figshare.apl.27643899
title: Supplement Number 1

description: SI-2H-MoS2
DOI: 10.60893/figshare.apl.27643899.v1
title: Supplement Number 1

description: SI-2H-MoS2
DOI: 10.15468/dl.dutu8f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Aspidistra magnifica N.S.Lý, K.S.Nguyen & T.S.Hoang)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023781-241107131044228/datasets/export for details.
DOI: 10.60893/figshare.apl.27628986
title: Supplementary Material

description: Unmarked/unhighlighted Supplementary Material for manuscript
DOI: 10.60893/figshare.apl.27628986.v1
title: Supplementary Material

description: Unmarked/unhighlighted Supplementary Material for manuscript
DOI: 10.15468/dl.p3q3uq
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "Country is Benin",
 "Month is one of (January, February, March, April, May, June, July, August, September, October, November, December)",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (b2db85d5-c5fe-4125-9e36-590a5f651829, 76f68a9a-c7e9-4628-8ed2-fca4f81fe87d)",
 "TaxonKey is Ximenia americana L.",
 "Year 1980-2024"
 ]
}

 The dataset includes 22 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023782-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.8248524
title: Genotyping of European Toxoplasma gondii strains by a new high-resolution next-generation sequencing-based method

description: The data set comprises 164 FASTQ files generated with an Ion AmpliSeq-based genotyping method for Toxoplasma gondii and a BED file used for the design of the Ion AmpliSeq primer panel. The FASTA file named as "AmpliSeq-ME49-Reference" was used as a reference for mapping and data analysis of the FASTQ files. The GZ file named as "Tgondii_IonAmpliSeq_Results_SNPs_VCF" is a VCF file, which contains all SNPs identified within the 164 FASTQ files relative to the AmpliSeq-ME49-Reference. The VCF file was converted into a FASTA file named as "Tgondii_IonAmpliSeq_Results_SNPs", which also contains the SNPs identified within the 164 FASTQ files relative to the AmpliSeq-ME49-Reference.

The work is published in the European Journal of Clinical Microbiology & Infectious Diseases with the title "Genotyping of European Toxoplasma gondii strains by a new high‑resolution next‑generation sequencing‑based method"; https://doi.org/10.1007/s10096-023-04721-7
DOI: 10.5281/zenodo.8377016
title: Genotyping of European Toxoplasma gondii strains by a new high-resolution next-generation sequencing-based method

description: The data set comprises 164 FASTQ files generated with an Ion AmpliSeq-based genotyping method for Toxoplasma gondii and a BED file used for the design of the Ion AmpliSeq primer panel. The FASTA file named as "AmpliSeq-ME49-Reference" was used as a reference for mapping and data analysis of the FASTQ files. The GZ file named as "Tgondii_IonAmpliSeq_Results_SNPs_VCF" is a VCF file, which contains all SNPs identified within the 164 FASTQ files relative to the AmpliSeq-ME49-Reference. The VCF file was converted into a FASTA file named as "Tgondii_IonAmpliSeq_Results_SNPs", which also contains the SNPs identified within the 164 FASTQ files relative to the AmpliSeq-ME49-Reference.

The work is published in the European Journal of Clinical Microbiology & Infectious Diseases with the title "Genotyping of European Toxoplasma gondii strains by a new high‑resolution next‑generation sequencing‑based method"; https://doi.org/10.1007/s10096-023-04721-7
DOI: 10.15468/dl.s8z7x3
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Aspidistra maguanensis S.Z.He & D.H.Lv)"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023784-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27866778
title: Underlying data

description: Underlying data sets:Feature counts (mRNA or microRNA)Individual-level pathway-based MPHL-PRSIndividual IDs refer to the same individuals across datasets, with the participant IDs in the feature counts additionally containing information on the serum (A, B, C or Placebo) and the treatment time (shortterm or longterm)
DOI: 10.6084/m9.figshare.27866778.v1
title: Underlying data

description: Underlying data sets:Feature counts (mRNA or microRNA)Individual-level pathway-based MPHL-PRSIndividual IDs refer to the same individuals across datasets, with the participant IDs in the feature counts additionally containing information on the serum (A, B, C or Placebo) and the treatment time (shortterm or longterm)
DOI: 10.15468/dl.mpmu6p
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aedes aegypti (Linnaeus, 1762)",
 "Country is Sri Lanka",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 113 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023785-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shdf8a
title: Occurrence Download

description: A dataset containing 8347 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Roadkill"
 ]
}

 The dataset includes 8347 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003162-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d7wg0l
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hechtia dichroantha Donn.Sm."
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003274-150721130643939/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dp6fyj
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Narcissus longispathus Degen & Hervier ex Pugsley"
 ]
}

 The dataset includes 69 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003274-150831095807960/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hrmpwd
title: Occurrence Download

description: A dataset containing 1966 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ursus arctos Linnaeus, 1758",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Country is United States of America",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 3000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 1966 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002318-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.