cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21076093.v1
title: Population density, climate zone, and ecological services data in the Loess Plateau and Qinling Mountains in China

description: <strong>1. Climate zone</strong> China’s climate zone data is compiled by China meteorological administration. The data takes the average daily temperature that more than 10 ℃ and the coldest temperature or multi-year extreme minimum temperature as heat index. Taking dryness as water index. Combining these two indices with topography and geomorphology characteristics, the country is divided into 8 primary climate regions and 32 secondary climate regions. Data Format: Shapefile. Projected Coordinate System: Krassovsky_1940_Albers. URL: https://www.resdc.cn/data.aspx?DATAID=243 <strong>2. Ecological services</strong> Ecological services are the many and varied benefits to humans provided by the natural environment and from healthy ecosystems. To assess the value of ecological services is an important basis for ecological environment protection, ecological function zoning, environmental economic accounting and ecological compensation decision-making. Based on the assessment of global ecological services by Costanza et al. (1997) and Xie et al. (2003), the equivalent weight factor table of ecological services of terrestrial ecosystems was formulated in China. This method has been widely adopted and quoted. In the estimation process, considering the basic equivalent of each ecosystem type, the method also considered the influence of spatiotemporal dynamic factors of NPP, precipitation and soil conservation regulation. The data was revised by biomass parameters to reflect regional differences in ecological services value. Units:￥·hm-1. Spatial resolution: 1 km. Projected Coordinate System: GCS_Krassovsky_1940. Data format: ArcGis Grid. URL: https://www.resdc.cn/DOI/DOI.aspx?DOIID=48 <strong>3. Population density</strong> The kilometre grid dataset of China's population spatial distribution is based on the demographic data of the national population statistics. Taking into account land use type, night light intensity, residential density and other factors that closely related to population. Using the multi-factor weight allocation method to upscale the population data which based on administrative regions as the basic statistical units. Firstly, calculate the population distribution weight of land use type, night light intensity, and residential density. Secondly, the total weight of each country-level administrative unit is calculated on the basic of standardizing the influence weights of above three aspects. Finally, using grid space calculation method to combine the unit weight of population with the total weight to spatialize population. Units: person·km-2. Spatial resolution: 1 km. Projected Coordinate System: GCS_Krassovsky_1940. Data format: ArcGis Grid. URL: https://www.resdc.cn/DOI/DOI.aspx?DOIid=32
DOI: 10.17632/ys6ds93wfr
title: Termite mound (heuweltje) cross-sections in Namaqualand, South Africa

description: These data present soil profile descriptions and photographs of  transects through termite mounds known as heuweltjies the semi-arid to arid Namaqualand region in the Northern Cape Province of South Africa.  

Two heuweltjie mounds near the town of Buffelsrivier in the  Buffels River valley, approximately 43 km west of Springbok, were excavated with a 220 PC Komatsu excavator. These heuweltjies were labelled H1 and H4. 
Location H1: -29.766540° 17.636620°. 
Location H4: -29.762680° 17.639690°

Chemistry data is included for H1 and H4

The sample numbers for H1 and H4  are in the form: HX-Y-Z where HX refers to which specific heuweltjie the sample is taken from and can be either H1 or H4; Y is the cross section distance from the west end of the heuweltjie, in metres, at which the sample was taken (1 – 58 m), and Z refers to the depth, in cm, down the specific sediment profile at that point. For example, if a sample was taken for H1 at a cross section distance of 4 m and a depth of 30 cm, the sample is called H1-4-30. If only HX-Y is mentioned, with no Z, this refers to the entire soil profile at that distance from the west end.

 A third heuweltjie was sampled in the open face of a mining excavation on the farm Nuttabooi. 
Location: -29.576843°; 17.362836°. Sample  name prefix NB. 

Location Kleinzee: Termite nests and activity in the sidewalls of mining excavations on the coast north of the Buffels River mouth near the town of Kleinzee (Kleinsee). Co-ordinates given in file at each location.

Location Koingnaas: Termite nests and activity in the sidewalls of mining excavations  on the coast south of the Buffels River mouth near the town of Koingnaas. Co-ordinates given in file at each location.

The folder named termite pictures includes pictures and descriptions all the termites identified in the field areas.
DOI: 10.6084/m9.figshare.14370545.v1
title: Dataset and analysis code

description: <b>This is the data and ananlysis code for "The Static and Dynamic Associations between Attachment and the Allocation of Resources in Mating-Parenting Trade-offs"</b>
DOI: 10.6084/m9.figshare.14958054.v2
title: Australia-load.xlsx

description: 澳大利亚负荷数据集，包括日期、天气、电价
DOI: 10.6084/m9.figshare.24065430.v1
title: Genome annotation release of Lutjanus erythropterus

description: Genome annotation release file of Lutjanus erythropterus
DOI: 10.6084/m9.figshare.26408209.v1
title: PCR data.zip

description: Obesity's global rise brings attention to related health issues, including brain functionality deterioration due to hippocampal neurogenesis and neuroplasticity alterations, leading to cognitive decline. This study aims to counteract the negative effects of obesity <i>via</i> treadmill endurance training (ET) in the hippocampus of a rat genetic model of obesity. The findings after ET based on analyses of expression profiles of individual genes demonstrate differences in neurotrophin-associated signaling, significantly affecting PI3K/Akt expression within the trained lean group. In contrast, we noticed activity-dependent changes regarding PLCγ/PKC/CAMKII signaling. While sedentary obese animals utilized neurotrophin signaling towards the PLCγ/PKC pathway, ET of both lean and obese rats shifted PLCγ activation to the alternative branch, with CAMKII emerging as a preferred downstream target crucial for synaptic plasticity and memory formation. A concomitant mRNA increase in the presynaptic marker synaptophysin suggests the beneficial role of ET in synaptogenesis and plasticity. The microglial pro-inflammatory marker Iba1 was suppressed in obese trained rats, accompanied by the upregulation of regenerative markers for immature/mature oligodendrocytes, and neurofilaments. Furthermore, the passive avoidance test revealed improved learning and memory among trained obese animals. These findings suggest that ET can moderate obesity-induced hippocampal damage, exert neuroprotective effects, and support hippocampal functions.
DOI: 10.6084/m9.figshare.7482128.v2
title: CRONICAS Cohort Study | Baseline | Multimorbidity

description: The <b>CRONICAS Cohort Study</b> is a longitudinal study performed in four Peruvian settings that differ by degree of urbanisation, level of outdoor and indoor pollution, and altitude.<br>The <b>CRONICAS Cohort Study protocol and variables</b> are described in full in:<br>Miranda JJ, Bernabe-Ortiz A, Smeeth L, Gilman RH, Checkley W; CRONICAS Cohort Study Group. Addressing geographical variation in the progression of non-communicable diseases in Peru: the CRONICAS cohort study protocol. <i>BMJ Open</i> 2012;2(1):e000610.<br>In this collection we make available the <b>dataset</b> and <b>code</b> for the <b>analysis of multimorbidity</b> using the baseline data.
DOI: 10.6084/m9.figshare.27316101.v1
title: Pedroncini et al data figures.xlsx

description: Neuroscience
DOI: 10.6084/m9.figshare.28279484.v1
title: <b>Discovery of host genetic factors through multi-locus GWAS against Toxoplasmosis in sheep: Addressing One Health perspectives</b>

description: <i>T. gondii </i>stands as one of the most successful pathogens, capable of infecting nearly all warm-blooded species. It is estimated that up to 50% of human populations could harbor Toxoplasmosis infections. Among the primary transmission routes is the consumption of tissue cysts from infected food-producing farm animals. Thus, controlling Toxoplasmosis in farm animals is of vital importance for public health and food safety. The implementation of selective breeding in farm animals, where available, could serve as an effective complementary strategy for eradicating Toxoplasmosis from herds. For this purpose, we conducted four multi-locus genome-wide association (GWA) approaches to uncover the underlying polygenic factors involved in innate resistance to Toxoplasmosis in naturally infected sheep. Our findings indicate that 16 SNPs, with varying levels of statistical power, significantly influence host immunity against <i>T. gondii</i> infection. This study marks the initial exploration of host genetic factors against Toxoplasmosis in livestock, utilizing the ovine paradigm as its foundation.
DOI: 10.6084/m9.figshare.28355441.v1
title: Popularity_Project

description: Facial expression has been proposed as a key mechanism in forming and maintaining social relationships. Here we show that facial expressivity predicts popularity during initial social group formation. We measured the facial behaviour of strangers during naturalistic online social interactions in small groups (N = 256; in 72 groups) and calculated social network indices based on relative liking. More expressive individuals were more popular and perceived as warmer and more cooperative. In contrast, attractiveness did not leverage a social advantage. We suggest that facial expressivity is perceived as an honest indicator of potential cooperation and therefore favoured in group settings where cooperation is important to offset potential competition. Our findings show that facial expression serves an important role in determining popularity in social group settings.
DOI: 10.6084/m9.figshare.19168520.v1
title: Climate Change Review_China

description: Climate Change Review_China
DOI: 10.6084/m9.figshare.24768654.v1
title: <b>Duffy et al. </b>- Antarctic polynya database

description: Data to support:Duffy et al. (in press) Emerging long-term trends and interdecadal cycles in Antarctic polynyas. <i>PNAS</i>.
DOI: 10.6084/m9.figshare.26820751.v2
title: <b>Soil-structure-interaction analysis of seismically isolated nuclear reactor buildings</b>

description: This digital appendix presents results of soil-structure-interaction (SSI) analysis of seismically isolated nuclear reactor buildings. The analysis investigates the significance of SSI on surface- (or near surface-) supported base-isolated reactor buildings
DOI: 10.6084/m9.figshare.7930961.v1
title: cytotocicity

description: cytotoxicity
DOI: 10.17632/39693gns8p
title: A planar curved Euler-Bernoulli beam element for large-displacement and small-strain analysis using NURBS curves with varying weights

description: This dataset provides the control point coordinates and corresponding weight values for the NURBS curves used to represent various initial beam configurations.
DOI: 10.17632/jbhcwd86x8
title: PTSD in Crime Scene Investigators in the USA

description: Excel file of data from study of PTSD symptoms experienced and coping tactics used by Crime Scene Investigators in the United States
DOI: 10.6084/m9.figshare.12642953.v7
title: Expanded dataset of mechanical properties and observed phases of multi-principal element alloys

description: This data article presents a compilation of mechanical properties of 630 multi-principal element alloys.Built upon recently published MPEA databases, this article includes updated records from previous reviews (with minor error corrections) along with new data from articles that were published since 2019.The extracted properties include composition, processing method, microstructure, density, hardness, yield strength, ultimate tensile strength, elongation, and Young’s modulus.Additionally, descriptors (e.g. grain size) not included in previous reviews were also extracted for articles that reported them.
DOI: 10.6084/m9.figshare.27134901.v1
title: The influence of Aspergillus fumigatus fatty acid oxygenases PpoA and PpoC on caspofungin susceptibility

description: <i>Aspergillus fumigatus</i> can cause Invasive Pulmonary Aspergillosis (IPA). Fungicidal azoles and fungistatic caspofungin (CAS) are the first- and second-line therapies, respectively, used to treat IPA. Treatment of <i>A. fumigatus</i> with CAS or micafungin induces production of the oxylipin 5,8-diHODE by the fungal oxygenase PpoA. Here we investigated the influence of ppo genes, that encode fatty acid oxygenases responsible for oxylipin biosynthesis, on CAS tolerance. PpoA and PpoC influence on CAS tolerance is mediated by MpkA phosphorylation and protein kinase A (PKA) activity. RNAseq transcriptional profiling and label-free quantitative proteomics of the ppoA and ppoC mutants showed that differentially expressed genes and proteins are related to secondary metabolites and carbohydrate metabolism. We also characterized two clinical isolates, CM7555 and IFM61407, that have decreased and increased susceptibility to CAS, respectively. CM7555 does not have increased oxylipin production in the presence of CAS while the oxylipin induction upon CAS exposure is increased in the IFM61407, suggesting oxylipins are not the single mechanism involved in CAS tolerance in these isolates. Upon CAS exposure, CM7555 has higher MpkA phosphorylation and PKA activity than IFM61407. Our results reveal different aspects and genetic determinants involved in <i>A. fumigatus</i> CAS tolerance.
DOI: 10.6084/m9.figshare.29162231.v1
title: Research Data for Splash Erosion in Balsa Plantations

description: Partial Research Data for hydrological mechanisms underlying erosion mitigation after converting rubber to balsa plantations.
DOI: 10.6084/m9.figshare.28938497.v1
title: Figure -1.jpg

description: Figure -1 presents the mechanical properties of specimens extracted from FGF-manufactured boxes, highlighting their comparative performance against injection-moulded and compression-moulded parts made from the same pellets. The FGF specimens are evaluated in two orientations – 0° and 90° relative to the filament extrusion direction – allowing to understand the anisotropic characteristics in strength and stiffness. The data for injection-moulding using virgin CF/PEEK pellets are taken from Syensqo datasheets.FGF: Fused-Granular-Fabrication. AM Flexbot E25 from CEAD Group. Nozzle: 9mm Extrusion Temperature: 380-400°CRecycled CF/PEKK-PEEK Pellets: Manufactured by Syensqo. Derived from CF/PEKK prepreg tape edge trim (TET) waste.Virgin CF/PEEK Pellets: Manufactured by Syensqo. KetaSpire® KT-880 CF/PEEK
DOI: 10.6084/m9.figshare.3517754.v1
title: Supplement 1. R code, data, and grid covariates used in the analyses.

description: File List R_Code.R data_100m.R grid_covariates.R Description R_Code.R contains annotated R code used to run the analyses in this paper; data_100m.R contains the count data and habitat covariates for the 307 survey plots; grid_covariates.R contains the standardized habitat covariate values used to computer population size for the entire island.
DOI: 10.6084/m9.figshare.16940671.v1
title: deepFlashTemplateT1SkullStripped.nii.gz

description: deep flash t1 template skull stripped<br>
DOI: 10.6084/m9.figshare.24080862.v1
title: Data and R code corresponding to publication: "The impact of raising alcohol taxes on government tax revenue: insights from five European countries"

description: Presented are the data and the R codes required to obtain the findings published in the study "The impact of raising alcohol taxes on government tax revenue: insights from five European countries" in the journal Applied Health Economics and Health Policy.Authors: Jakob Manthey, Inese Gobiņa, Laura Isajeva, Jarosław Neneman, Rainer Reile, Mindaugas Štelemėkas, Jürgen Rehm
DOI: 10.6084/m9.figshare.24405865.v1
title: Text-mined dataset of sol-gel synthesized BiFeO<sub>3</sub> thin films

description: This dataset contains protocols for BiFeO<sub>3</sub> thin film synthesis via the sol-gel method, mined from the literature. The set includes 340 data records, each representing a single synthesis procedure. All records comprise a total of 178 unique articles.
DOI: 10.6084/m9.figshare.4924565.v1
title: Supplementary data from Dog growls express various contextual and affective content for human listeners

description: The raw data used in the analysis.
DOI: 10.17632/h2s22wr5py
title: Cattle side view and back view dataset

description: The dataset was collected from small villages in eastern Chinese Inner Mongolia Autonomous region, which is known as the hometown of Horqin cattle. The dataset contains side and back views of 72 cattle. Each cattle is accompanied by detailed annotations, including oblique body length, withers height, heart girth, hip length, as well as body weight among other crucial data points. At present, the number of image datasets that can be used to analyze cattle is very limited. In the public datasets, most of them contain multiple cows in each image, which is mainly for recognition tasks, and it is impossible to determine the detailed feature points of each cow to measure the body size. This data set allows us to perform more complex estimation tasks such as automated measurements and weight prediction. In the field of computer vision, utilizing this dataset can facilitate the construction of deep learning models to develop an automated livestock monitoring system. Improve the management efficiency and economic benefits of animal husbandry.
DOI: 10.17632/xvw8v3686b
title: Data for: Evidence of Early Cretaceous lower arc crust delamination and its role in the opening of the South China Sea

description: The data include SIMS zircon U−Pb data, 40Ar/39Ar dating data, zircon Hf−O isotopic data, cooling rate calculation of the granitoids as well as elemental and isotopic model parameters and results of the dredged samples from the South China Sea
DOI: 10.6084/m9.figshare.11764158.v2
title: 6 molecular dynamics simulations of coronavirus 2019-nCoV protease model in complex with different conformations of lopinavir.

description: Molecular dynamics simulations of comparative model of novel coronavirus 2019-nCoV protease Mpro in complex with 6 different conformations based on the Catalophore point-cloud alignment and (re)- docking of lopinavir into the 2019ncov virus protease model. The docking experiment produced 8 clusters of possible conformations, we chose 6 out of 8 conformers and ran an all-atom 300 ps MD at 310 K (=36.85°C).<br>-The two images in the main folder refers to the docked structures before MD simulation.-The file all_centroids.pse contains the frames representing the centroid of the subsequent MD simulation for each docking cluster.-Each archive contains the centroid in PDB format, the starting frame of the simulation in GRO format and the compressed trajectory in XTC format. In the directory "other_files" there are other data generated during the simulation, i.e. heatmap representing the contact frequency between the ligand atoms and the ones belonging to the homology model.
DOI: 10.6084/m9.figshare.19352243.v1
title: FASTA formatted Teleost fish sequences

description: Fasta formatted sequence list including identifiers of the NOD1 genes for all of the species used in our project.
DOI: 10.6084/m9.figshare.19771396.v1
title: Mobility indicators by groups

description: With trip records between November 2019 and September 2020 in Kunming, China, we identify people who relied on traveling by subway both before and after the first pandemic wave. We define frequent travelers as those who traveled at least three days in each week during the four consecutive weeks before the pandemic. Comparing the same individual’s trip records in September 2020, those who still traveled at least three days in each week are defined as samples.Then they mobility indicators are calculated by weeks.
DOI: 10.6084/m9.figshare.22260286.v1
title: Table A-1: Types of Pain in HSD and EDS

description: The types of pain associated with HSD and EDS are listed in Table A-1, adapted from a literature review performed by Chopra, et al. in 2017.
DOI: 10.6084/m9.figshare.27038518.v1
title: Space of Morphable Material Appearance: Datasets and Models

description: Here, we provide the real photo datasets of materials and the trained generative models used in our paper:Liao C., Sawayama M., & Xiao B. (2024). Probing the Link Between Vision and Language in Material Perception Using Psychophysics and Unsupervised Learning. <i>PLoS Computational Biology</i><b>Real photo datasets:</b>Soap dataset: 8085 photos. Please check our previously published TID dataset.Rock dataset: rock_dataset.zip (3180 photos)Squishy toy dataset: squishy_toy_dataset.zip (1900 photos)<b>StyleGAN2-ADA models:</b>Soap Model: StyleGAN_models/StyleGAN_G_soap.pklRock Model: StyleGAN_models/StyleGAN_G_rock.pklSquishy Toy Model: StyleGAN_models/StyleGAN_G_toy.pkl<br>
DOI: 10.6084/m9.figshare.27193398.v1
title: DNA_NanoGripper_Fig.7B

description: "Bioinspired Designer DNA NanoGripper for Virus Sensing and Potential Inhibition": The dataset for the plot in <b>Fig. 7B</b>.
DOI: 10.17632/r7rst4cb9h
title: "Lactate activates the mitochondrial electron transport chain independently of its metabolism​" by Cai et. al.

description: Raw western blot and GC-MS data for the submitted manuscript.
DOI: 10.21942/uva.27255978.v1
title: Multi-scale dynamics samples

description: Samples corresponding to Explaining multi-scale choice dynamics paper. See the corresponding OSF page (https://osf.io/fbu59/) for the corresponding code.
DOI: 10.17632/n2rbrb9t4f
title: Dataset for Fetus Framework

description: Objective: To investigate if artificial intelligence can identify fetus intracranial structures in pregnancy weeks 11–14;
This dataset contains 1528 2D sagittal-view ultrasound images of 1519 females collected from Shenzhen People’s Hospital. Data was used for standard/non-standard (S-NS) plane classification, a key step for NT measurement and Down Syndrome assessment. An external dataset with 156 images from the Longhua branch of Shenzhen People’s Hospital was also provided to test AI performance.
Annotations for nine key structures (thalami, midbrain, palate, 4th ventricle, cisterna magna, nuchal translucency (NT), nasal tip, nasal skin, and nasal bone) could be found in ObjectDetection.xlsx file.
DOI: 10.25411/aru.13296314.v1
title: Body image and implicit interoception dataset

description: Data for 36 participants using electroencephalography, electrocardiography, and electrogastrography.
DOI: 10.6084/m9.figshare.19174745.v1
title: Questionnaire final(English).docx

description: Questionnaire<br>