cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26629261.v1
title: Additional file 10 of Dual spatially resolved transcriptomics for human host–pathogen colocalization studies in FFPE tissue sections

description: Additional file 10: Table S10. Colocalization analysis results of COVID-19 sections within ST clusters. Differentially expressed genes in SARS-CoV-2+ vs. SARS-CoV-2- spots within ST clusters across COVID-19 sections. Differential expression analysis between SARS-CoV-2+ and SARS-CoV-2- spots within ST clusters across COVID-19 sections overall used Wilcoxon rank sum test and DESeq2 negative binomial distribution tests, p-value &lt; 0.05.
DOI: 10.6084/m9.figshare.26629261
title: Additional file 10 of Dual spatially resolved transcriptomics for human host–pathogen colocalization studies in FFPE tissue sections

description: Additional file 10: Table S10. Colocalization analysis results of COVID-19 sections within ST clusters. Differentially expressed genes in SARS-CoV-2+ vs. SARS-CoV-2- spots within ST clusters across COVID-19 sections. Differential expression analysis between SARS-CoV-2+ and SARS-CoV-2- spots within ST clusters across COVID-19 sections overall used Wilcoxon rank sum test and DESeq2 negative binomial distribution tests, p-value &lt; 0.05.
DOI: 10.15468/dl.p8fw2b
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.290899 -33.907605, 148.290899 -33.909851, 148.284161 -33.909851, 148.284161 -33.914343, 148.293145 -33.914343, 148.293145 -33.907605, 148.290899 -33.907605))"
 ]
}

 The dataset includes 82 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069936-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24452441
title: Additional file 1 of Clinical evaluation of metagenomic next-generation sequencing in unbiased pathogen diagnosis of urinary tract infection

description: Additional file 1: Table S1. Primers and probes used for confirmatory qPCR.
DOI: 10.6084/m9.figshare.24452441.v1
title: Additional file 1 of Clinical evaluation of metagenomic next-generation sequencing in unbiased pathogen diagnosis of urinary tract infection

description: Additional file 1: Table S1. Primers and probes used for confirmatory qPCR.
DOI: 10.6084/m9.figshare.24452636.v1
title: Additional file 2 of Clinical evaluation of metagenomic next-generation sequencing in unbiased pathogen diagnosis of urinary tract infection

description: Additional file 2: Table S2. Detailed information of bacterial and fungal pathogens detection result by mNGS testing.
DOI: 10.6084/m9.figshare.24455016.v1
title: Additional file 2 of Impact of COVID-19 on patient follow-up during supportive periodontal therapy: a retrospective study based on phone call survey

description: Additional file 2.
DOI: 10.15468/dl.yrypu8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.540183 -33.909851, 148.540183 -33.914343, 148.542428 -33.914343, 148.542428 -33.909851, 148.540183 -33.909851))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069937-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.24457733
title: Additional file 1 of The short- and long-term changes of upper airway and alar in nongrowing patients treated with Mini-Implant Assisted Rapid Palatal Expansion (MARPE): a systematic review and meta-analysis

description: Additional file 1: Appendix table 1. The details of search strategy.
DOI: 10.6084/m9.figshare.24457733.v1
title: Additional file 1 of The short- and long-term changes of upper airway and alar in nongrowing patients treated with Mini-Implant Assisted Rapid Palatal Expansion (MARPE): a systematic review and meta-analysis

description: Additional file 1: Appendix table 1. The details of search strategy.
DOI: 10.6084/m9.figshare.24465156
title: Additional file 1 of Identification of RECK as a protective prognostic indicator and a tumor suppressor through regulation of the ERK/MAPK signaling pathway in gastric cancer

description: Additional file 1: Table S1. The sequences of siRNA targeting RECK. Table S2. Primer sequences used in RT-qPCR experiments. Table S3. The pan-cancer T cell inflamed score of TCGA STAD patients. Table S4. Comparisons of the inhibitory immune checkpoints between RECK groups.
DOI: 10.6084/m9.figshare.24465156.v1
title: Additional file 1 of Identification of RECK as a protective prognostic indicator and a tumor suppressor through regulation of the ERK/MAPK signaling pathway in gastric cancer

description: Additional file 1: Table S1. The sequences of siRNA targeting RECK. Table S2. Primer sequences used in RT-qPCR experiments. Table S3. The pan-cancer T cell inflamed score of TCGA STAD patients. Table S4. Comparisons of the inhibitory immune checkpoints between RECK groups.
DOI: 10.1594/pangaea.723884
title: (Table DR2) Planktic and benthic foraminifreral isotope data for ODP Hole 207-1258A
DOI: 10.1594/pangaea.323261
title: Water temperature and salinity real-time profiles from cruise 6287799 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.112270
title: Physical oceanography from CTD station EN198_5-13
DOI: 10.1594/pangaea.696282
title: Organic carbon and nitrogen concentrations in surface waters of the North Atlantic along 20°E in July-August 1996

description: Redfield stoichiometry has proved a robust paradigm for the understanding of biological production and export in the ocean on a long-term and a large-scale basis. However, deviations of carbon and nitrogen uptake ratios from the Redfield ratio have been reported. A comprehensive data set including all carbon and nitrogen pools relevant to biological production in the surface ocean (DIC, DIN, DOC, DON, POC, PON) was used to calculate seasonal new production based on carbon and nitrogen uptake in summer along 20°W in the northeast Atlantic Ocean. The 20°W transect between 30 and 60°N covers different trophic states and seasonal stages of the productive surface layer, including early bloom, bloom, post-bloom and non-bloom situations. The spatial pattern has elements of a seasonal progression. We also calculated exported production, i.e., that part of seasonal new production not accumulated in particulate and dissolved pools, again separately for carbon and nitrogen. The pairs of estimates of 'seasonal new production' and 'exported production' allowed us to calculate the C : N ratios of these quantities. While suspended particulate matter in the mixed layer largely conforms to Redfield stoichiometry, marked deviations were observed in carbon and nitrogen uptake and export with progressing season or nutrient depletion. The spring system was characterized by nitrogen overconsumption and the oligotrophic summer system by a marked carbon overconsumption. The C : N ratios of seasonal new as well as exported production increase from early bloom values of 5-6 to values of 10-16 in the post-bloom/oligotrophic system. The summertime accumulation of nitrogen-poor dissolved organic matter can explain only part of this shift.
description: Unfiltered water samples were taken in 10 ml ampoules (sealed immediately after being acidified with phosphoric acid to pH&lt;2, sampling), or 40 ml screw-lid vials, and measured onboard at sampling or next days, or frozen (-20°C) until being acidified and measured in home labs.Carbon measurement was by high-temperature catalytic oxydation in a 10 cm column packed with 5% Pt on aluminum oxide beads at 900°C in a stream of oxygen, and CO2 detection by infrared extinction after the removal of moisture and SO2 by appropriate traps (cold trap, Mg-percarbonate, Na-pyrophosphate, tin, bronze or Sulfix). The apparatus was the dual channel Dimatek 2000 equipped with a Binos 200 detector.Nitrogen was measured by chemoluminescence detection of NO2 in the combustion gases after leaving the Binos detector in one of the two channels of the setup. Most measurements of samples containing high nitrate were discarded, when data were inconsistent. The nature of nitrate interference is not clear.
description: Supplement to: Körtzinger, Arne; Koeve, Wolfgang; Kähler, W; Mintrop, Ludger J (2001): C:N ratios in the mixed layer during the productive season in the northeast Atlantic Ocean. Deep Sea Research Part I: Oceanographic Research Papers, 48(3), 661-688
DOI: 10.1594/pangaea.112008
title: Basic hydrographic, nutrient and carbon/nitrogen chemistries at station AT_II-119/5_42-1
DOI: 10.1594/pangaea.476477
title: Hydrochemistry measured on water bottle samples at station NAtl_1981_AN_37N/92

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.389618
title: Water temperature XBT profiles from cruise LATI499 (SCQC)

description: SCQC=quality controlled by Science Center. For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.476874
title: Hydrochemistry measured on water bottle samples at station NAtl_1983_OC_51W/269

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.321061
title: Water temperature BT profiles from cruise 180591002 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.825624
title: (Table A1) Long chain diol distributions in surface sediments
DOI: 10.1594/pangaea.476361
title: Hydrochemistry measured on water bottle samples at station NAtl_1981_AN_26N/214

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.321085
title: Water temperature BT profiles from cruise 180591033 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.357669
title: Water temperature XBT profiles from cruise 3EGR693 (SCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.476855
title: Hydrochemistry measured on water bottle samples at station NAtl_1983_OC_51W/250

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.477042
title: Hydrochemistry measured on water bottle samples at station NAtl_1989_OC_8N/49-1

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.321239
title: Water temperature real-time profiles from cruise FNCZ91 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.4121/c14ff7d7-f02b-47f5-93ba-8f889ea8c9ff
title: Data underlying the publication: Risk of Rainfall Caused Leaching from Bio-Composite Material based Building Façades into the Aquatic Environment

description: The new bio-composite materials are used for different products such as façade building elements . Two new bio-composite materials were analysed. Each material was tested in its new and weathered forms, the latter being subject to cyclic UV irradiation and high humidity to simulate weather conditions. First, two rainfall intensities were selected using the Koninklijk Nederlands Meteorologisch Instituut (KNMI) database, followed by laboratory work including the preparation of synthetic rainwater and leaching tests to determine the potential release of specific chemical substances, such as heavy metals and resin compounds, under different rainfall contidions. The leaching concentrations obtained from these tests were then assessed for their potential impact on surface water quality. Using laboratory test outcomes as a basis, the risk assessment for potential leaching from façade elements into surface waters was conducted. Two scenarios of leaching were analysed, a single rain event of intensity 5 mm/h and duration of 1 hour, and a single rain event of intensity 15 mm/h and duration of 1 hour. In order to overcome the uncertainties caused by the limited input data available, a sensitivity analysis was carried out by first varying the leaching concentrations and then the rainfall intensity. The aim was to evaluate the changes in the PEC/PNEC ratio as a function of these two input parameters and to gain a better understanding of the leaching behaviour as a function of these two parameters.
DOI: 10.4121/c14ff7d7-f02b-47f5-93ba-8f889ea8c9ff.v1
title: Data underlying the publication: Risk of Rainfall Caused Leaching from Bio-Composite Material based Building Façades into the Aquatic Environment

description: The new bio-composite materials are used for different products such as façade building elements . Two new bio-composite materials were analysed. Each material was tested in its new and weathered forms, the latter being subject to cyclic UV irradiation and high humidity to simulate weather conditions. First, two rainfall intensities were selected using the Koninklijk Nederlands Meteorologisch Instituut (KNMI) database, followed by laboratory work including the preparation of synthetic rainwater and leaching tests to determine the potential release of specific chemical substances, such as heavy metals and resin compounds, under different rainfall contidions. The leaching concentrations obtained from these tests were then assessed for their potential impact on surface water quality. Using laboratory test outcomes as a basis, the risk assessment for potential leaching from façade elements into surface waters was conducted. Two scenarios of leaching were analysed, a single rain event of intensity 5 mm/h and duration of 1 hour, and a single rain event of intensity 15 mm/h and duration of 1 hour. In order to overcome the uncertainties caused by the limited input data available, a sensitivity analysis was carried out by first varying the leaching concentrations and then the rainfall intensity. The aim was to evaluate the changes in the PEC/PNEC ratio as a function of these two input parameters and to gain a better understanding of the leaching behaviour as a function of these two parameters.
DOI: 10.1594/pangaea.665424
title: Oceanography at CTD/bottle station IFREMER_2264
DOI: 10.1594/pangaea.401614
title: Water temperature and current velocity from surface drifter SVP_18759
DOI: 10.1594/pangaea.421364
title: Hourly delayed mode sea level from coastal tide gauge station Settlement_Point in 1989
DOI: 10.25505/fiz.icsd.cc2jpmxs
title: CSD 2344496: Experimental Crystal Structure Determination

description: Related Article: Ping-Xin Wu, Chun-Xia Chen, Yan-Qiong Sun, Shou-Tian Zheng|2024|Chem.Commun.|60|8888|doi:10.1039/D4CC02720E
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.26628415
title: Additional file 1 of Determinants of life satisfaction among migrants in South Africa: an analysis of the GCRO’s quality of life survey (2009–2021)

description: Supplementary Material 1
DOI: 10.1594/pangaea.321084
title: Water temperature BT profiles from cruise 180591032 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.424696
title: Daily fast delivery sea level from coastal tide gauge station Settlement_Point in 1999
DOI: 10.1594/pangaea.402409
title: Water temperature and current velocity from surface drifter SVP_30656
DOI: 10.1594/pangaea.418619
title: Hourly delayed mode sea level from coastal tide gauge station Charleston in 1993
DOI: 10.1594/pangaea.679366
title: Physical oceanography at CTD station CE0506_15
DOI: 10.1594/pangaea.434056
title: Hourly sea level from coastal tide gauge station Charleston in 1957 (Research quality database)
DOI: 10.1594/pangaea.476461
title: Hydrochemistry measured on water bottle samples at station NAtl_1981_AN_37N/78

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.744344
title: Physical oceanography during Scotia cruise Scotia93/1 to the North Sea
DOI: 10.1594/pangaea.401405
title: Water temperature and current velocity from surface drifter SVP_16006
DOI: 10.6084/m9.figshare.26634009
title: Additional file 3 of CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure

description: Additional file 3: Table S5. Types of Alternative Splicing events captured in CHESS 3 and other datasets as measured against the MANE transcripts. Only transcripts on primary scaffolds of the GRCH38 were considered in this comparison. Furthermore, coordinates of CDSs were adjusted to the first stop codon with gffread.
DOI: 10.6084/m9.figshare.26634009.v1
title: Additional file 3 of CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure

description: Additional file 3: Table S5. Types of Alternative Splicing events captured in CHESS 3 and other datasets as measured against the MANE transcripts. Only transcripts on primary scaffolds of the GRCH38 were considered in this comparison. Furthermore, coordinates of CDSs were adjusted to the first stop codon with gffread.
DOI: 10.1594/pangaea.782944
title: (Table 1) Major and trace element composition of marine sediments of the world's major subduction zones

description: Sediment depth is given in mbsf. All concentrations reported relative to dry weight (110°C).
DOI: 10.1594/pangaea.665652
title: Oceanography at CTD/bottle station IFREMER_2492
DOI: 10.1594/pangaea.706136
title: (Table A1) Chemical composition of sediments from DSDP Hole 91-596B, east of Tonga
DOI: 10.1594/pangaea.322511
title: Water temperature real-time profiles from cruise 4154800 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.6084/m9.figshare.24465142
title: Additional file 1 of Comparison of gene clustering criteria reveals intrinsic uncertainty in pangenome analyses

description: Additional file 1: Table S1. Popular tools for gene clustering and their application to pangenome analysis.
DOI: 10.6084/m9.figshare.24465142.v1
title: Additional file 1 of Comparison of gene clustering criteria reveals intrinsic uncertainty in pangenome analyses

description: Additional file 1: Table S1. Popular tools for gene clustering and their application to pangenome analysis.
DOI: 10.34740/kaggle/dsv/9184890
title: Dental OPG XRAY
DOI: 10.1594/pangaea.828647
title: Abundance of Cnidaria and Ctenophora in the North Western Atlantic sampled in August and September 2011

description: The research leading to these results received (partial/full) funding from the European Commission FP7 EURO-BASIN (European Basin-Scale Analysis, Synthesis, and Integration; Grant Agreement 264 933).
DOI: 10.15468/dl.9rgjm4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.733321 -33.909851, 148.733321 -33.918834, 148.737813 -33.918834, 148.737813 -33.909851, 148.733321 -33.909851))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069938-240626123714530/datasets/export for details.
DOI: 10.1594/pangaea.320241
title: Water temperature real-time profiles from cruise NTDS90 (DCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.1594/pangaea.477053
title: Hydrochemistry measured on water bottle samples at station NAtl_1989_OC_8N/59-1

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.476481
title: Hydrochemistry measured on water bottle samples at station NAtl_1981_AN_37N/96

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.706139
title: (Table A1) Chemical composition of sediments from DSDP Hole 91-596, east of Tonga
DOI: 10.1594/pangaea.429086
title: Daily sea level from coastal tide gauge station Lagos in 1967 (Research quality database)
DOI: 10.1594/pangaea.398488
title: Water temperature and current velocity from SOFAR float EB149

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.663452
title: Oceanography at CTD/bottle station IFREMER_0292
DOI: 10.1594/pangaea.401645
title: Water temperature and current velocity from surface drifter SVP_18805
DOI: 10.1594/pangaea.744243
title: Physical oceanography during G. O. Sars cruise GS71/3 to the North Sea
DOI: 10.1594/pangaea.357826
title: Water temperature XBT profiles from cruise NTSG90 (SCQC)

description: For definition of quality flags see hdl:10013/epic.31518.d001
DOI: 10.6084/m9.figshare.26634057
title: Additional file 3 of Application of the Expert Recommendations for Implementing Change (ERIC) compilation of strategies to health intervention implementation in low- and middle-income countries: a systematic review

description: Additional file 3. Study descriptive information.
DOI: 10.1594/pangaea.402470
title: Water temperature and current velocity from surface drifter SVP_7119
DOI: 10.1594/pangaea.805139
title: (Table 2) Depths and ages of discrete samples from ODP Site 162-983 sediments

description: Sediment depth is given in mcd.
DOI: 10.6084/m9.figshare.24465052
title: Additional file 1 of Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24465052.v1
title: Additional file 1 of Functional and structural MRI based obsessive-compulsive disorder diagnosis using machine learning methods

description: Supplementary Material 1
DOI: 10.1594/pangaea.477065
title: Hydrochemistry measured on water bottle samples at station NAtl_1989_OC_8N/7-1

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.477058
title: Hydrochemistry measured on water bottle samples at station NAtl_1989_OC_8N/63-1

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.426530
title: Daily sea level from coastal tide gauge station Charleston in 1968 (Research quality database)