cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26644276.v1
title: Additional file 16 of Tree and shrub richness modifies subtropical tree productivity by regulating the diversity and community composition of soil bacteria and archaea

description: Additional file 16: Table S6. The significantly differential abundances of bacterial and archaeal amplicon sequence variants (ASVs) assigned to functional groups under the combined effects of tree and shrub species richness by Generalized Linear Model tests.
DOI: 10.1594/pangaea.754214
title: Radiosonde PS76/31629 during POLARSTERN cruise ARK-XXV/3 on 2010-10-02 11:00h

description: Height of tropopause 7326 m, precipitable water content 0.8752 cm
DOI: 10.1594/pangaea.399637
title: Current velocity from SOFAR float TA25

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.400903
title: Accompanying wind measurements for bottle data of cruise A7/85 during the MRI-LDEO cooperative study

description: Wind measurements refer to data sets: doi:10.1594/PANGAEA.400792, doi:10.1594/PANGAEA.400793
DOI: 10.1594/pangaea.400853
title: Hydrochemistry measured on water bottle samples at station B8/90_372 during the MRI-LDEO cooperative study

description: For pCO2 measurements were about 0.5 liter of air equilibrated with sample. Sample volume 4. Nutrient samples are collected in 250 ml soft low density polyethylene acid washed bottles. They are kept refrigerated until analysis if it was not carried out soon after sampling. Otherwisee samples are stored at -20°C.
DOI: 10.1594/pangaea.400856
title: Hydrochemistry measured on water bottle samples at station B8/90_448 during the MRI-LDEO cooperative study

description: For pCO2 measurements were about 0.5 liter of air equilibrated with sample. Sample volume 4. Nutrient samples are collected in 250 ml soft low density polyethylene acid washed bottles. They are kept refrigerated until analysis if it was not carried out soon after sampling. Otherwisee samples are stored at -20°C.
DOI: 10.1594/pangaea.400857
title: Hydrochemistry measured on water bottle samples at station B8/90_449 during the MRI-LDEO cooperative study

description: For pCO2 measurements were about 0.5 liter of air equilibrated with sample. Sample volume 4. Nutrient samples are collected in 250 ml soft low density polyethylene acid washed bottles. They are kept refrigerated until analysis if it was not carried out soon after sampling. Otherwisee samples are stored at -20°C.
DOI: 10.6084/m9.figshare.26630782
title: Additional file 3 of Genome-wide identification and expression analysis of the NRT genes in Ginkgo biloba under nitrate treatment reveal the potential roles during calluses browning

description: Additional file 3.
DOI: 10.1594/pangaea.400858
title: Hydrochemistry measured on water bottle samples at station B8/90_450 during the MRI-LDEO cooperative study

description: For pCO2 measurements were about 0.5 liter of air equilibrated with sample. Sample volume 4. Nutrient samples are collected in 250 ml soft low density polyethylene acid washed bottles. They are kept refrigerated until analysis if it was not carried out soon after sampling. Otherwisee samples are stored at -20°C.
DOI: 10.1594/pangaea.399660
title: Current velocity from SOFAR float TAtb12

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399655
title: Current velocity from SOFAR float TA40B

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399672
title: Water temperature and current velocity from SOFAR float TPG08A

description: Velocity algorithm: backward differencing. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399711
title: (Table 3) Strontium and Neodymium isotope ratios measured on sediment core SU90-08
DOI: 10.1594/pangaea.734250
title: (Table 1) Mineralogy, geochemistry and isotopic ratios of peridotites from ODP Site 209-1271
DOI: 10.6084/m9.figshare.24630276
title: Additional file 1 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 1: DESeq2 output of 1,259 DEG (padj &lt; 0.1) for MP2_HDAC1_OE vs. MP2_NTC.
DOI: 10.6084/m9.figshare.24630276.v1
title: Additional file 1 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 1: DESeq2 output of 1,259 DEG (padj &lt; 0.1) for MP2_HDAC1_OE vs. MP2_NTC.
DOI: 10.6084/m9.figshare.24630430
title: Additional file 2 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 2: Gene set enrichment analysis of 322 DEG list.
DOI: 10.6084/m9.figshare.24630430.v1
title: Additional file 2 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 2: Gene set enrichment analysis of 322 DEG list.
DOI: 10.1594/pangaea.399656
title: Current velocity from SOFAR float TA42

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.6084/m9.figshare.26644342
title: Additional file 3 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 3: Gene Set Enrichment Analysis of 1,040 DEG.
DOI: 10.6084/m9.figshare.26644342.v1
title: Additional file 3 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 3: Gene Set Enrichment Analysis of 1,040 DEG.
DOI: 10.6084/m9.figshare.26644345
title: Additional file 4 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 4: DESeq2 results of 598 DEG (HDAC1 included) with increased HDAC1 binding and H3K27ac acetylation in promoter.
DOI: 10.6084/m9.figshare.26644345.v1
title: Additional file 4 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 4: DESeq2 results of 598 DEG (HDAC1 included) with increased HDAC1 binding and H3K27ac acetylation in promoter.
DOI: 10.6084/m9.figshare.26644348
title: Additional file 5 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 5: Gene set enrichment analysis results using 597 DEG with increased HDAC1 binding and H3K27ac acetylation in promoter.
DOI: 10.6084/m9.figshare.26644348.v1
title: Additional file 5 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 5: Gene set enrichment analysis results using 597 DEG with increased HDAC1 binding and H3K27ac acetylation in promoter.
DOI: 10.6084/m9.figshare.26644351
title: Additional file 6 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 6: DESeq2 output of the 71 genes that modulate GTPase activity in the cell lines resistant (n = 7) and sensitive (n = 7) to gemcitabine.
DOI: 10.6084/m9.figshare.26644351.v1
title: Additional file 6 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 6: DESeq2 output of the 71 genes that modulate GTPase activity in the cell lines resistant (n = 7) and sensitive (n = 7) to gemcitabine.
DOI: 10.6084/m9.figshare.26644354
title: Additional file 7 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 7: Comparison of GTPase activity between cell lines. P-values were calculated using an unpaired parametric t-test.
DOI: 10.1594/pangaea.399658
title: Current velocity from SOFAR float TA44B

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.746141
title: (Table S1) Geochemical data and reconstructed sea surface temperatures from Cenomanian-Turonian strata from ODP Site 207-1260
DOI: 10.6084/m9.figshare.24425829.v1
title: Additional file 2 of Exploring pathway interactions to detect molecular mechanisms of disease: 22q11.2 deletion syndrome

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26644354.v1
title: Additional file 7 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 7: Comparison of GTPase activity between cell lines. P-values were calculated using an unpaired parametric t-test.
DOI: 10.6084/m9.figshare.26644357
title: Additional file 8 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 8: Coefficient values for variables selected in the LASSO model.
DOI: 10.6084/m9.figshare.26644357.v1
title: Additional file 8 of Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

description: Supplementary Table 8: Coefficient values for variables selected in the LASSO model.
DOI: 10.1594/pangaea.663696
title: Oceanography at CTD/bottle station IFREMER_0536
DOI: 10.1594/pangaea.708766
title: Radiosonde PS71/28785 during POLARSTERN cruise ANT-XXIV/4 on 2008-05-13 11:00h

description: Height of tropopause 12670 m, precipitable water content 2.5633 cm
DOI: 10.1594/pangaea.399832
title: Characteristics of benthic foraminifera assemblage in sediment core PS2564-2
DOI: 10.1594/pangaea.418903
title: Hourly delayed mode sea level from coastal tide gauge station Exuma in 1993
DOI: 10.1594/pangaea.399827
title: Characteristics of benthic foraminifera assemblage in sediment core PS2495-3
DOI: 10.1594/pangaea.399833
title: Characteristics of benthic foraminifera assemblage in sediment core PS2564-3
DOI: 10.1594/pangaea.220708
title: Mineral composition of bulk sediment from Hole 7-67A
DOI: 10.1594/pangaea.399831
title: Characteristics of benthic foraminifera assemblage in sediment core PS2499-5
DOI: 10.1594/pangaea.399605
title: Water temperature and current velocity from SOFAR float SL143

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399599
title: Water temperature and current velocity from SOFAR float SL137B

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399600
title: Water temperature and current velocity from SOFAR float SL138

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399580
title: Water temperature and current velocity from SOFAR float SL127A

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.744430
title: Physical oceanography during Tridens cruise Tridens93/1 to the North Sea
DOI: 10.1594/pangaea.399584
title: Water temperature and current velocity from SOFAR float SL130A

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399585
title: Water temperature and current velocity from SOFAR float SL130B

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399586
title: Water temperature and current velocity from SOFAR float SL131A

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399611
title: Current velocity from SOFAR float TA04

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.6084/m9.figshare.24630433
title: Additional file 2 of CREaTor: zero-shot cis-regulatory pattern modeling with attention mechanisms

description: Additional file 2: Table S1. Numbers of annotated cCREs in different cell types. Table S2. Pearson r between observed and predicted expression of in-cell type test chromosomes (chr8 and chr9 in 19 cell types excluding K562). Table S3. Pearson r between observed and predicted expression of genes in K562 autosomes (cross-cell type test chromosomes) with different random seeds. Table S4a. Leave-one-chromosome-out experiment results. Table S4b. Leave-one-cell type-out experiment results.
DOI: 10.6084/m9.figshare.24630433.v1
title: Additional file 2 of CREaTor: zero-shot cis-regulatory pattern modeling with attention mechanisms

description: Additional file 2: Table S1. Numbers of annotated cCREs in different cell types. Table S2. Pearson r between observed and predicted expression of in-cell type test chromosomes (chr8 and chr9 in 19 cell types excluding K562). Table S3. Pearson r between observed and predicted expression of genes in K562 autosomes (cross-cell type test chromosomes) with different random seeds. Table S4a. Leave-one-chromosome-out experiment results. Table S4b. Leave-one-cell type-out experiment results.
DOI: 10.6084/m9.figshare.26644372
title: Additional file 3 of CREaTor: zero-shot cis-regulatory pattern modeling with attention mechanisms

description: Additional file 3: Table S5. CRISPR perturbation-based experimental-validated K562 enhancer-target gene datasets. Table S6. Manifest of ENCODE data (excluding CAGE) used in this study. Table S7. Summary of data types used for different cell types. Table S8. Manifest of CAGE data used in this study.
DOI: 10.6084/m9.figshare.26644372.v1
title: Additional file 3 of CREaTor: zero-shot cis-regulatory pattern modeling with attention mechanisms

description: Additional file 3: Table S5. CRISPR perturbation-based experimental-validated K562 enhancer-target gene datasets. Table S6. Manifest of ENCODE data (excluding CAGE) used in this study. Table S7. Summary of data types used for different cell types. Table S8. Manifest of CAGE data used in this study.
DOI: 10.1594/pangaea.421451
title: Hourly delayed mode sea level from coastal tide gauge station St_Georges_Island in 1985
DOI: 10.1594/pangaea.763399
title: Chemical oceanography time series from the equatorial Atlantic

description: Depth, water: values with "_.1" indicate the 1 % light level.
DOI: 10.1594/pangaea.399365
title: Hydrochemistry measured on water bottle samples at station B14/93_999 during the Irminger Sea seasonal study
DOI: 10.1594/pangaea.399359
title: Hydrochemistry measured on water bottle samples at station B13/93_997 during the Irminger Sea seasonal study
DOI: 10.1594/pangaea.399364
title: Hydrochemistry measured on water bottle samples at station B14/93_1003 during the Irminger Sea seasonal study
DOI: 10.1594/pangaea.399381
title: Hydrochemistry measured on water bottle samples at station B5/93_188 during the Irminger Sea seasonal study
DOI: 10.1594/pangaea.400827
title: Hydrochemistry measured on water bottle samples at station B5/84_414 during the MRI-LDEO cooperative study

description: For pCO2 measurements were about 0.5 liter of air equilibrated with sample. Sample volume 4. Nutrient samples are collected in 250 ml soft low density polyethylene acid washed bottles. They are kept refrigerated until analysis if it was not carried out soon after sampling. Otherwisee samples are stored at -20°C.
DOI: 10.1594/pangaea.400844
title: Hydrochemistry measured on water bottle samples at station B8/86_802 during the MRI-LDEO cooperative study

description: For pCO2 measurements were about 0.5 liter of air equilibrated with sample. Sample volume 4. Nutrient samples are collected in 250 ml soft low density polyethylene acid washed bottles. They are kept refrigerated until analysis if it was not carried out soon after sampling. Otherwisee samples are stored at -20°C.
DOI: 10.6084/m9.figshare.24630447
title: Additional file 2 of Metabolic dynamics and prediction of sFGR and adverse fetal outcomes: a prospective longitudinal cohort study

description: Additional file 2: Table S7. Correlation statistics between metabolite levels and physical development parameters.
DOI: 10.1594/pangaea.400849
title: Hydrochemistry measured on water bottle samples at station B8/90_365 during the MRI-LDEO cooperative study

description: For pCO2 measurements were about 0.5 liter of air equilibrated with sample. Sample volume 4. Nutrient samples are collected in 250 ml soft low density polyethylene acid washed bottles. They are kept refrigerated until analysis if it was not carried out soon after sampling. Otherwisee samples are stored at -20°C.
DOI: 10.1594/pangaea.920301
title: Continuous water level observations at station BEFmate_I4low (2017-04)
DOI: 10.6084/m9.figshare.24630447.v1
title: Additional file 2 of Metabolic dynamics and prediction of sFGR and adverse fetal outcomes: a prospective longitudinal cohort study

description: Additional file 2: Table S7. Correlation statistics between metabolite levels and physical development parameters.
DOI: 10.6084/m9.figshare.26644390
title: Additional file 3 of Metabolic dynamics and prediction of sFGR and adverse fetal outcomes: a prospective longitudinal cohort study

description: Additional file 3: Table S9. Metabolite sensitivity analysis results.
DOI: 10.6084/m9.figshare.26644390.v1
title: Additional file 3 of Metabolic dynamics and prediction of sFGR and adverse fetal outcomes: a prospective longitudinal cohort study

description: Additional file 3: Table S9. Metabolite sensitivity analysis results.
DOI: 10.1594/pangaea.920460
title: Continuous water level observations at station BEFmate_I4upp (2019-08)
DOI: 10.1594/pangaea.663423
title: Oceanography at CTD/bottle station IFREMER_0263
DOI: 10.1594/pangaea.663424
title: Oceanography at CTD/bottle station IFREMER_0264
DOI: 10.1594/pangaea.399644
title: Current velocity from SOFAR float TA31

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399647
title: Current velocity from SOFAR float TA35B

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399627
title: Current velocity from SOFAR float TA18

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399651
title: Current velocity from SOFAR float TA36B

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399650
title: Current velocity from SOFAR float TA36A

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399620
title: Current velocity from SOFAR float TA12

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.1594/pangaea.399624
title: Current velocity from SOFAR float TA16

description: Processing method: splined, velocity algorithm: splined. Data have been checked by the WOCE Subsurface Float Data Assembly Center. See hdl:10013/epic.32931.d001 for further information.
DOI: 10.6084/m9.figshare.24630454
title: Additional file 2 of Platelet and mitochondrial RNA is decreased in plasma-derived extracellular vesicles in women with preeclampsia—an exploratory study

description: Additional file 2. G profiler analysis (significantly pathways) between women with PE vs. controls at 22-24 weeks and 36-38 weeks and between women with PE 22-24 weeks vs. 36-38 weeks.
DOI: 10.6084/m9.figshare.24630454.v1
title: Additional file 2 of Platelet and mitochondrial RNA is decreased in plasma-derived extracellular vesicles in women with preeclampsia—an exploratory study

description: Additional file 2. G profiler analysis (significantly pathways) between women with PE vs. controls at 22-24 weeks and 36-38 weeks and between women with PE 22-24 weeks vs. 36-38 weeks.
DOI: 10.15468/dl.d3yfk0
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thyrsostachys Gamble"
 ]
}

 The dataset includes 129 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003441-150422101436696/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4d72dq
title: Occurrence Download

description: A dataset containing 12109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Inventario de fauna presente en la jurisdicción de Corantioquia"
 ]
}

 The dataset includes 12109 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045883-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yqfsxn
title: Occurrence Download

description: A dataset containing 3818 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllostomus hastatus (Pallas, 1767)"
 ]
}

 The dataset includes 3818 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003441-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a8w9h6
title: Occurrence Download

description: A dataset containing 940 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Biodiversidad del agroecosistema de palma de aceite"
 ]
}

 The dataset includes 940 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045892-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.