cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11620518.v2
title: Assembly and annotation of the Adineta vaga L1 genome

description: This dataset includes:<br>1) Diploid genome assembly generated for the <i>A. vaga</i> L1 genome with SPAdes (version 3.6.0) from MiSeq reads (file 'Adineta.vaga.L1.contigs.fasta'). <br>2) Haploid sub-assembly of the <i>A. vaga</i> L1 genome (file 'Adineta.vaga.L1.haploid.segments.fasta'). This is haploid representation of the L1 genome containing mostly non-redundant genomic segments extracted from the L1 diploid contigs. <br>3) Annotation of protein-coding genes produced for the <i>A. vaga</i> L1 diploid contigs in the GTF format (78,303 gene models from 75,877 loci; file 'Adineta.vaga.L1.contigs.annotation.gtf').<br>4) List of gene models from the filtered gene set (file 'Adineta.vaga.L1.contigs.annotation.transcripts.filtered.txt'). This set includes 61,531 gene models retained after filtering aimed at removing pseudogenes and putative annotation errors. For loci with more than one gene model, the longest one is included.<br>5) Coordinates of gene models transferred to the haploid sub-assembly (file 'Adineta.vaga.L1.haploid.segments.transcripts.gtf') in the GTF format (only transcript and CDS feature types are included). Only those gene models that were fully contained within the haploid segments are retained (n = 23,802).
DOI: 10.6084/m9.figshare.21688448.v1
title: Bipolar data: EMDR vs Supportive Psychotherapy

description: Dataset from a randomized controlled trial testing the efficacy of 20 x 1 hour weekly sessions of Eye Movement Desensitization and Reprocessing (EMDR) therapy, with Supportive Therapy, in Bipolar Disorder patients with psychological trauma symptoms.
DOI: 10.6084/m9.figshare.24571675.v1
title: Supplementary Material for: Characteristics and prognostic factors of SARS-CoV-2 Omicron variant infection in hemodialysis patients: a single-center study in China

description: Introduction: This study aimed to evaluate the characteristics and prognostic factors for coronavirus disease 2019 (COVID-19) patients on maintenance hemodialysis (HD).
Methods: All admitted HD patients who were infected with severe acute respiratory syndrome coronavirus 2 (SARS-Cov-2) from December 1, 2022 to January 31, 2023 were included. Patients with pneumonia were further classified into the mild, moderate, severe and critical illness. Clinical symptoms, laboratory results, radiologic findings, treatment and clinical outcomes were collected. Independent risk factors for progression to critical disease, and in-hospital mortality were determined by the multivariate regression analysis. The receiver operating characteristic (ROC) analysis with the area under the curve (AUC) was used to evaluate the predictive performance of developing critical status and in-hospital mortality.
Results: A total of 182 COVID-19 patients with HD were included, with an average age of the 61.55 years. Out of the total, 84 (46.1%) patients did not have pneumonia and 98 (53.8%) patients had pneumonia. Among patients with pneumonia, 48 (49.0%) had moderate illness, 26 (26.5%) severe illness, and 24 (24.5%) critical illness, respectively. Elder age [HR (95% CI): 1.07 (1.01-1.13), P&lt;0.01], increased levels of lactate dehydrogenase (LDH) [1.01 (1.003-1.01), P&lt;0.01] and C-reactive protein (CRP) [1.01 (1.00-1.01), P=0.04] were risk factors for developing critical illness. Elder age [1.11 (1.03-1.19), P=0.01], increased procalcitonin (PCT) [1.07 (1.02-1.12), P=0.01], and LDH level [1.004 (1-1.01), P=0.03] were factors associated with increased risk of in-hospital mortality. 
Conclusions: Age, CRP, PCT and LDH can be used to predict negative clinical outcomes for HD patients with COVID-19 pneumonia.
DOI: 10.6084/m9.figshare.830506.v1
title: Impostor Syndrome 2013 lecture

description: My 2013 version of a lecture on the Impostor Syndrome given to 1st year MA students in the Columbia Univeristy Conservation Biology programme.
DOI: 10.6084/m9.figshare.28829939.v1
title: _C__Users_sindhu hospitals_Downloads_CORRELATIONS.html.png

description: corelations analysis
DOI: 10.17632/hm25f9zpry
title: Journal Data

description: Background: As the number of coronavirus infection cases increases, interactions become more limited, and life ceases to function normally. The insecurity of family life during the COVID-19 pandemic affects family life quality, which can be seen in various ways, including schooling, jobs, the economy, and social support. Objective: To analyzes family typology based on stress levels, economic stress, and family quality of life, and the influence of religiosity, economic pressure, stress levels, and financial management on family quality of life during the COVID-19 pandemic. Methods: Using cross-sectional study design with 270 respondents, all of whom were pre-selected based on the criterion of working mothers or homemakers with husbands. Results: Economic pressure, stress levels, and financial management are categorized as low and moderately organized religiosity levels, but the quality of life is relatively high. Religiosity harmed stress levels, whereas economic pressure had a strong positive impact. Furthermore, family stress levels and economic pressure directly negatively impact, and financial management positively impacts the family's quality of life. On the other hand, religiosity indirectly affects the quality of life through stress levels. A family typology based on stress levels and quality of life tend to be type I (best) and type IV (equivalent). Type IV (equivalent) with low economic pressure and quality of life dominates a family typology based on economic pressure and quality of life. Conclusions: The results show the importance of improving the family's quality of life through the reduction of economic pressure, enhancing the way of managing finances, and managing stress properly.
DOI: 10.6084/m9.figshare.14386688.v1
title: Dataset 2

description: Phylogenetic trees, which were used for the horizontal gene analysis by T-Rex. Taxa condes are below. The trees are in the Newick format.<br>1: Synechococcus_JA_2_3B_a_2_13.faa2: Synechococcus_JA_3_3Ab.faa3: Synechococcus_PCC_7336.faa4: Synechococcus_sp_60AY4M2.faa5: Synechococcus_sp_63AY4M1.faa6: Synechococcus_sp_63AY4M2.faa7: Synechococcus_sp_65AY640.faa8: Synechococcus_sp_65AY6A5.faa9: Synechococcus_sp_65AY6Li.faa10: Synechococcus_thermal_Bulgaria.faa<br>
DOI: 10.6084/m9.figshare.4038177.v1
title: Supplemental File 1 converted original test data from Hydration affects the physical and mechanical properties of baleen tissue

description: Baleen, an anisotropic oral filtering tissue found only in the mouth of mysticete whales and made solely of alpha-keratin, exhibits markedly differing physical and mechanical properties between dried or (as in life) hydrated states. On average baleen is 32.35% water by weight in North Atlantic right whales (<i>Eubalaena glacialis</i>) and 34.37% in bowhead whales (<i>Balaena mysticetus</i>). Baleen's wettability measured by water droplet contact angles shows that dried baleen is hydrophobic whereas hydrated baleen is highly hydrophilic. Three-point flexural bending tests of mechanical strength reveal that baleen is strong yet ductile. Dried baleen is brittle and shatters at about 20-30 N mm<sup>-2</sup> but hydrated baleen is less stiff; it bends with little force and absorbed water is squeezed out when force is applied. Maximum recorded stress was 4 times higher in dried (mean 14.29 N mm<sup>-2</sup>) versus hydrated (mean 3.69 N mm<sup>-2</sup>) baleen, and the flexural stiffness was &gt;10 times higher in dried (mean 633 N mm<sup>-2</sup>) versus hydrated (mean 58 N mm<sup>-2</sup>) baleen. In addition to documenting hydration's powerful effects on baleen, this study indicates that baleen is far more pliant and malleable than commonly supposed, with implications for studies of baleen's structure and function as well as its susceptibility to oil or other hydrophobic pollutants.
DOI: 10.6084/m9.figshare.7884881.v1
title: gVCF_HG01171

description: 1000 Genomes gVCF mapped to hs37d5 for HG01171. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.6084/m9.figshare.12366551.v1
title: "Ring Breaker": Neural Network Driven Synthesis Prediction of the Ring System Chemical Space

description: data and models complementing our publication in the Journal of Medicinal Chemistry:https://pubs.acs.org/doi/abs/10.1021/acs.jmedchem.9b01919
DOI: 10.6084/m9.figshare.8244434.v1
title: Golf.data.final.2019.xlsx

description: Data for 150 golfers who placed in the top 20 in a major tournament, including The Players Championship, 2018-2019
DOI: 10.17632/td5rhktygc
title: LINF_160022300

description: WD40 repeat-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.25637814.v1
title: set-up_description

description: <pre>PDF with details about the acquisition set-up.</pre>
DOI: 10.6084/m9.figshare.21221747.v3
title: Extended Data 4

description: Descriptives of all measures
DOI: 10.6084/m9.figshare.20021780.v1
title: Family life influence on the communicative performance of children with Down syndrome

description: PURPOSE: to investigate the aspects of family life that influence communicative performance of children with Down syndrome. METHODS: application of the "Features of the Family Environment" questionnaire and pragmatic analysis of children with DS communication. 30 children of both genders, ranging from five to 10 years old, have partaken this research. Spearman's rank order correlation was applied. The analyses were performed using the SPSS' 10.0 version, and in all of them, a significance level of 5% was adopted. RESULTS: correlation between the items of the questionnaire and pragmatic analysis results regarding communicative means and communicative function was found to exist. CONCLUSION: it is necessary to take family life aspects that influence the communicative performance of children with DS into consideration.
DOI: 10.17632/4xgm4tj2fr
title: Supplemental Materials - JAAD-D-24-03512R1

description: Supplemental methods for JAAD article titled "Risk of Major Cardiovascular, Renal, and Thromboembolic Events in Patients with Systemic Sclerosis: A Longitudinal Cohort Analysis"
DOI: 10.6084/m9.figshare.7326842.v1
title: silicon nanostructure optical information storage

description: optical scattering spectra of large amount of digital information encoding silicon nanostructures; for training of artificial neural network<br>
DOI: 10.6084/m9.figshare.9415052.v1
title: Supplementary Material for: AK002, a Humanized Sialic Acid-Binding Immunoglobulin-Like Lectin-8 Antibody that Induces Antibody-Dependent Cell-Mediated Cytotoxicity against Human Eosinophils and Inhibits Mast Cell-Mediated Anaphylaxis in Mice

description: <b><i>Introduction:</i></b> Pathologic accumulation and activation of mast cells and eosinophils are implicated in allergic and inflammatory diseases. Sialic acid-binding immunoglobulin-like lectin (Siglec)-8 is an inhibitory receptor selectively expressed on mast cells, eosinophils and, at a lower extent, basophils. When engaged with an antibody, Siglec-8 can induce apoptosis of activated eosinophils and inhibit mast cell activation. AK002 is a humanized, non-fucosylated IgG1 anti-Siglec-8 antibody undergoing clinical investigation for treatment of allergic, inflammatory, and proliferative diseases. Here we examine the human tissue selectivity of AK002 and evaluate the in vitro, ex vivo, and in vivo activity of AK002 on eosinophils and mast cells. <b><i>Methods:</i></b> The affinity of AK002 for Siglec-8 and CD16 was determined by biolayer interferometry. Ex vivo activity of AK002 on human eosinophils from blood and dissociated human tissue was tested in apoptosis and antibody-dependent cell-mediated cytotoxicity (ADCC) assays. The in vivo activity of a murine precursor of AK002 (mAK002) was tested in a passive systemic anaphylaxis (PSA) humanized mouse model. <b><i>Results:</i></b> AK002 bound selectively to mast cells, eosinophils and, at a lower level, to basophils in human blood and tissue and not to other cell types examined. AK002 induced apoptosis of interleukin-5-activated blood eosinophils and demonstrated potent ADCC activity against blood eosinophils in the presence of natural killer cells. AK002 also significantly reduced eosinophils in dissociated human lung tissue. Furthermore, mAK002 prevented PSA in humanized mice through mast cell inhibition. <b><i>Conclusion:</i></b> AK002 selectively evokes potent apoptotic and ADCC activity against eosinophils and prevents systemic anaphylaxis through mast cell inhibition.
DOI: 10.6084/m9.figshare.5121760.v1
title: Supplementary Material for: ‘Grand Theft Artery’: Hemodynamics in Innominate Artery Stenosis

description: Medicine
DOI: 10.6084/m9.figshare.155876.v3
title: Journals on Twitter

description: Number of followers, following, and tweets from public Twitter accounts for several scientific journals and some societies, publishers, and blog networks. Collected between October 2011 and January 2013. When plotted, there seem to be a few very fast-growing Twitter account, and a few slow ones, but the majority of accounts in this set (selected mainly based on initial follower number - see below) grows with the same rate. Sample set was originally chosen to compare the performance of the @Dev_journal Twitter account, so the initial selection contains mostly accounts within that same range, with some smaller accounts for sibling journals (from the same publisher) added without control for their size. (In other words: this is only useful to compare accounts that fall within the bulk of the graph.) New accounts were added later - those lack data for the first months. Over the course of data collection, two Twitter accounts were abandoned - those lack data for the last months. Data were collected in the middle of the month. The exact collection date is listed at the top of each column. Within each month, numbers for all Twitter accounts were collected on the same date.
DOI: 10.6084/m9.figshare.19662933.v2
title: Rheum nobile genome

description: Rheum nobile genome
DOI: 10.6084/m9.figshare.25556859.v1
title: Supplementary Material for: Oxytocin-augmented modular-based group intervention for loneliness: A proof-of-concept randomized-controlled trial

description: Introduction: Loneliness poses a significant health problem and existing psychological interventions have shown only limited positive effects on loneliness. Based on preliminary evidence for impaired oxytocin signaling in trait-like loneliness, the current proof-of-concept study used a randomized, double-blind, placebo-controlled design to probe intranasal oxytocin (OT) as an adjunct to a short-term modular-based group intervention for individuals suffering from high trait-like loneliness (HL, UCLA loneliness scale ≥ 55). 

Methods: Seventy-eight healthy HL adults (56 women) received five weekly group psychotherapy sessions. HL participants received OT or placebo before the intervention sessions. Primary outcomes were trait-like loneliness measured at baseline, after the intervention, and again at two follow-up time points (three weeks and three months), and, assessed at each session, state loneliness (visual analog scale), perceived stress (Perceived Stress Scale, PSS-10), quality of life (World Health Organization Five Well-Being Index, WHO-5), and the therapeutic relationship (Group Questionnaire, GQ-D). 

Results: The psychological intervention was associated with significantly reduced perceived stress and improved trait-like loneliness across treatment groups, which was still evident at the 3-month follow-up. OT had no significant effect on trait-like loneliness, quality of life, or perceived stress. However, compared to placebo, OT significantly facilitated the decrease in state loneliness within sessions and significantly improved positive bonding between the group members. 

Conclusion: Despite significantly improved trait-like loneliness after the intervention, OT did not significantly augment this effect. Further studies are needed to determine optimal intervention designs to translate the observed acute effects of OT into long-term benefits.
DOI: 10.15482/usda.adc/1522952
title: Data from: The influence of active video game play upon physical activity and screen-based activities in sedentary children
DOI: 10.6084/m9.figshare.21778649.v1
title: ARRIVE Checklist

description: The ARRIVE checklist we made to explain in detail regarding our treatment of experimental animals (in vivo study)
DOI: 10.17632/g9cb36j5hr
title: Dataset: Improved out-of-plane properties through alternative print path and in-layer heating

description: Dataset from tensile tests, thermal meaurements
- "Temperature.xlsx": Temperatures measured along with what heights they were captured
- "Mechanical.xlsx": Maximum load, sample cross-section, UTS, strain and Tensile modulus
DOI: 10.6084/m9.figshare.14170733.v1
title: Inertial sensor alignment

description: Constant misalignments that describe the rotation from inertial sensor coordinate system to the optical marker-based coordinate system of the surrounding cluster markers.
DOI: 10.6084/m9.figshare.28891646.v1
title: High-entropy-doping effect in a rapid-charging Nb<sub>2</sub>O<sub>5</sub> lithium-ion battery negative electrode<sub>2</sub>O<sub>5</sub> lithium-ion battery negative electrode

description: The success of doping depends on factors like ionic radius similarity. Doping without causing phase changein matter likeNb2O5is difficult. Here Xu et al. introduce an emergent and rigid high-entropy-doping effect in Nb2O5to achieve a successful doping without phase change.
DOI: 10.6084/m9.figshare.4964528.v1
title: O and Hf isotope data. Zircon O- and Hf-isotope constraints on the genesis and tectonic significance of Permian magmatism in Patagonia

description: Summary of the O and Hf isotope data from zircon spot analyses
DOI: 10.6084/m9.figshare.4154241.v2
title: Content-based Discovery for Web Map Service using Support Vector Machine and User Relevance Feedback_Support_data

description: The support files contains the 11689 thumbnail images, the WMSlayer SQL script and CSV format file, the extracted image features and the data introductions. Specially, the thumbnails are obtained by making thumbnails of the WMS layers whose details can be found in the WMSlayer SQL or CSV files. These features are extracted from the WMS layer thumbnail images and contains total 11689 records. The paper will be accepted in the Journal of PLOS ONE. The doi of the paper is 10.1371/journal.pone.0166098. The paper's title is Content-based Discovery for Web Map Service using Support Vector Machine and User Relevance Feedback. If you are interested in the paper content and want to have further discussion with us, please contact hukai@whu.edu.cn or  zhipeng.gui@whu.edu.cn.
DOI: 10.6084/m9.figshare.11316335.v1
title: Supplementary Material for: <b><i>Staphylococcus aureus</i></b> Carriage Status in Patients with Hidradenitis Suppurativa: An Observational Cohort Study in a Tertiary Referral Hospital in Athens, Greece

description: <b><i>Background:</i></b> Hidradenitis suppurativa (HS) is a chronic, recurrent, auto-inflammatory disease that affects the pilosebaceous unit in apocrine gland-bearing areas. Bacteria are thought to play a role in the development and progression of disease. In addition, antibiotics are frequently used as first-line management for HS. We sought to determine the carriage status of <i>Staphylococcus aureus</i> and its resistance to antibiotics among patients with HS in a tertiary referral hospital in Athens, Greece. <b><i>Methods:</i></b> In this observational cohort study, 68 consecutive patients attending the HS clinic of “Attikon” General University Hospital in Athens, Greece, during a 9-month period were enrolled. All patients had not received any antibiotic therapy for any reason during the previous 3 months before enrollment. Nasal and oropharyngeal sampling<i></i>were obtained, and specimens were tested for the presence of <i>S. aureus.</i>Antibiotic susceptibility testing was performed using the VITEK 2 system. Standard statistical tests, descriptive statistics tests, and χ<sup>2</sup> and Pearson correlation tests were performed, using IBM SPSS Statistics 25<i>.</i>The level of significance was set at a <i>p</i>value &lt;0.05. <b><i>Results:</i></b> Sixty-eight patients with HS were studied. There were 44 females (64.7%) and 24 males (35.3%). The mean age was 36.63 ± 13.0 (IQR = 21), and the mean age at onset of disease was 23.90 ± 11.53 (IQR = 14). The mean duration of disease was 12.74 ± 10.20 years (IQR = 15). Fifteen (22.1%) of the patients were Hurley stage I, 22 (32.4%) were Hurley stage II, and 31 (45.6%) were Hurley stage III. <i>S. aureus</i> carriage was detected in 17 patients (25%). Six of them (35.3%) had MRSA strains. There was an increased prevalence of <i>S. aureus</i> colonization (<i>p</i> = 0.058) and MRSA (<i>p</i> = 0.101) in Hurley stage III patients, but this result was not statistically significant. <b><i>Conclusions:</i></b> We found a 25% prevalence of <i>S. aureus</i> colonization (17/68 patients) and a 35.3% prevalence of MRSA (6/17) among our HS patients. There was an increased prevalence of <i>S. aureus</i>and MRSA positivity in HS patients with Hurley stage III. Further studies are needed to clarify the possible clinical significance of <i>S. aureus</i> carriage in the disease development and progression as well as in the treatment outcome.
DOI: 10.6084/m9.figshare.25331758.v2
title: qdms-mapseq data

description: All data used in "High-throughput determination of RNA tertiary contact thermodynamics by quantitative DMS chemical mapping"
DOI: 10.17632/mpwdsyywyy
title: Intra rater reliability of Fukuda step test among school going children 

description: Fukuda stepping test is used to evaluate dynamic balance in people those have vestibular dysfunction
- Participants was selected by purposive sampling method. The subject was made to stand at the centre of the circle with bare foot, they must perform this test eyes open and eyes close. 
Among all the students no one was aware about this test but they know the importance of balance they perform this test very well; the result was not normal
The normative reference score for school going children for eyes open was 23.1667(11.52798) and for eyes close was 13.4615(9.25122)
DOI: 10.6084/m9.figshare.26928220.v2
title: Dataset - Correction for highly spatially varying aberrations over multiple isoplanatic patches by exploiting their spatial correlation

description: Data for the paper "Correction for highly spatially varying aberrations over multiple isoplanatic patches by exploiting their spatial correlation".The file k.mat contains the list of Fourier space components. The files r.mat contains the time-gated reflection matrix.
DOI: 10.6084/m9.figshare.1492351.v1
title: HELCATS HCME_WP2_V02

description: The FP7 Heliospheric Cataloguing, Analysis and Technique Service (HELCATS) project capitalises on European expertise in heliospheric imaging built up over the last decade, particularly by lead involvement in NASA’s STEREO mission, whilst also exploiting the vast wealth of long established European expertise in such areas as solar and coronal imaging, as well as the interpretation of in-situ and radio measurements of solar wind phenomena. The HCME_WP2 is a catalogue of manually identified CME events observed by the STEREO A and B heliospheric imaging cameras. This catalogue underpins the other work within the project by providing a complete list of CMEs detected by HI. These are then assessed and modelled using different techniques as part of other work packages within the project. Version 02 of this catalogue is the first formal release and covers the period from April 2007 to December 2013. Event IDs are tied to the corresponding event and will not change in future versions even if events are added or removed.