cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8342743
title: PARAGON 1 - KM2112 - Hyperpro Profiles

description: These Simons Collaboration on Ocean Processes and Ecology (SCOPE) data products were produced by the University of Hawaiʻi at Mānoa with support from the Simons Foundation. This dataset was collected on the R/V Kilo Moana, which departed and returned to Honolulu, HI, with most of the cruise spent following an anticyclonic eddy northeast of the Hawaiian islands. The Satlantic (now Seabird) HyperPro is an in-situ free-fall profiling unit designed to measure the apparent optical properties of the ocean with concurrent measurements of temperature, salinity, chlorophyll and dissolved matter fluorescence. The unit is equipped with one up-looking and one down-looking hyperspectral (350-800nm) radiometer with 10 ± 0.3 nm resolution, a WET Labs ECO-Puck Triplet, and temperature, pressure, and conductivity sensors. It also incorporates a ship-mounted surface (air) hyperspectral radiometer. These data are collated from the vertical profiles. Note that lat/lon was hand recorded at time of deployment and may not exactly match the ship's cruise log. Time stamp is in UTC.
DOI: 10.34740/kaggle/dsv/6468213
title: Youtube Trending Video - Taiwan & Hong Kong
DOI: 10.58109/24a2-eg26
title: A Phase II Pilot Study of Glivec (imatinib mesylate formerly known as STI571) Combined with Induction Chemotherapy in Blast-Phase Chronic Myeloid Leukemia and Philadelphia Chromosome-Positive Acute Lymphoblastic Leukemia, to evaluate safety and improve remission rate.(CMLALL01)

description: HeSANDA 1.0.0
description: Dataset includes 
Data for 41 patients with blast phase CML, utilising Glivec and monitoring remission status 
Demographic data, diagnostic data, treatment data, outcome data
DOI: 10.5281/zenodo.8342746
title: PARAGON 2 - KM2209 - Hyperpro Profiles

description: These Simons Collaboration on Ocean Processes and Ecology (SCOPE) data products were produced by the University of Hawaiʻi at Mānoa with support from the Simons Foundation. This dataset was collected on the R/V Kilo Moana during the PARAGON 2 cruise which departed from and returned to Honolulu, HI. The cruise track was Lagrangian, following free-floating arrays deployed in a chlorophyll bloom feature. The Satlantic (now Seabird) HyperPro is an in-situ free-fall profiling unit designed to measure the apparent optical properties of the ocean with concurrent measurements of temperature, salinity, chlorophyll and dissolved matter fluorescence, and optical backscattering (a proxy for total particle load). The unit is equipped with one up-looking and one down-looking hyperspectral (350-800nm) radiometer with 10 ± 0.3 nm resolution, a WET Labs ECO-Puck Triplet, and temperature, pressure, and conductivity sensors. It also incorporates a ship-mounted surface (air) hyperspectral radiometer. These data are collated from the vertical profiles. Note that lat/lon was hand recorded at time of deployment and may not exactly match the ship's cruise log. Time stamp is in UTC.
DOI: 10.5281/zenodo.8342745
title: PARAGON 2 - KM2209 - Hyperpro Profiles

description: These Simons Collaboration on Ocean Processes and Ecology (SCOPE) data products were produced by the University of Hawaiʻi at Mānoa with support from the Simons Foundation. This dataset was collected on the R/V Kilo Moana during the PARAGON 2 cruise which departed from and returned to Honolulu, HI. The cruise track was Lagrangian, following free-floating arrays deployed in a chlorophyll bloom feature. The Satlantic (now Seabird) HyperPro is an in-situ free-fall profiling unit designed to measure the apparent optical properties of the ocean with concurrent measurements of temperature, salinity, chlorophyll and dissolved matter fluorescence, and optical backscattering (a proxy for total particle load). The unit is equipped with one up-looking and one down-looking hyperspectral (350-800nm) radiometer with 10 ± 0.3 nm resolution, a WET Labs ECO-Puck Triplet, and temperature, pressure, and conductivity sensors. It also incorporates a ship-mounted surface (air) hyperspectral radiometer. These data are collated from the vertical profiles. Note that lat/lon was hand recorded at time of deployment and may not exactly match the ship's cruise log. Time stamp is in UTC.
DOI: 10.58109/4p3g-nz37
title: A Multicentre Randomised Controlled Trial Comparing Two Strategies for the Diagnosis of Invasive Aspergillosis in High-Risk Haematology Patients (SC01)

description: HeSANDA 1.0.0
description: Dataset includes 
Data for 240 patients Data for patients with various heamatological malignancy, assessing response to two strategies for diagnosing lung infection with Aspergillus
Demographic data, diagnostic data, treatment data, outcome data
DOI: 10.34740/kaggle/dsv/6468222
title: Scrabble data from woogles.io
DOI: 10.5281/zenodo.8342752
title: PARAGON 2 - KM2209 - LISST, AC-S, and ECO

description: These Simons Collaboration on Ocean Processes and Ecology (SCOPE) data products were produced by the University of Hawaiʻi at Mānoa with support from the Simons Foundation. This dataset was collected on the R/V Kilo Moana during the PARAGON 2 cruise which departed from and returned to Honolulu, HI. The cruise track was Lagrangian, following free-floating arrays deployed in a chlorophyll bloom feature. Three biooptical instruments were plumbed to the underway uncontaminated seawater (intake depth 6m). Data for each instrument were averaged to the minute and matched to a timestamp on the minute. LISST: Filtered values (&lt;0.2 um) removed from all data. The summed volume concentration of particles (in uL/L), the standard LISST output, is presented for 3 size ranges: 1.25-2 µm, 2-20 µm, and 20-100 µm. Larger size classes are excluded due to low detection limits and scattering at density gradients. Note that data have not been processed to remove outliers. AC-S: Filtered values (&lt;0.2 um) removed from all data (see White et al., 2017, GRL); data corrected for residual temperature and scattering; AC-S chl a concentrations obtained from a Gaussian fit over absorbance spectra in the red portion of the spectrum, assuming in vivo chl-a specific absorption of 0.0203 m2/mg at 674 nm. ECO: filtered values (&lt;0.2 um) removed from chl and volume scattering data; chl fluorescence converted to mg/m3 using factory calibrations. CDOM not included due to faulty channel. Time is in UTC.
DOI: 10.5281/zenodo.8342751
title: PARAGON 2 - KM2209 - LISST, AC-S, and ECO

description: These Simons Collaboration on Ocean Processes and Ecology (SCOPE) data products were produced by the University of Hawaiʻi at Mānoa with support from the Simons Foundation. This dataset was collected on the R/V Kilo Moana during the PARAGON 2 cruise which departed from and returned to Honolulu, HI. The cruise track was Lagrangian, following free-floating arrays deployed in a chlorophyll bloom feature. Three biooptical instruments were plumbed to the underway uncontaminated seawater (intake depth 6m). Data for each instrument were averaged to the minute and matched to a timestamp on the minute. LISST: Filtered values (&lt;0.2 um) removed from all data. The summed volume concentration of particles (in uL/L), the standard LISST output, is presented for 3 size ranges: 1.25-2 µm, 2-20 µm, and 20-100 µm. Larger size classes are excluded due to low detection limits and scattering at density gradients. Note that data have not been processed to remove outliers. AC-S: Filtered values (&lt;0.2 um) removed from all data (see White et al., 2017, GRL); data corrected for residual temperature and scattering; AC-S chl a concentrations obtained from a Gaussian fit over absorbance spectra in the red portion of the spectrum, assuming in vivo chl-a specific absorption of 0.0203 m2/mg at 674 nm. ECO: filtered values (&lt;0.2 um) removed from chl and volume scattering data; chl fluorescence converted to mg/m3 using factory calibrations. CDOM not included due to faulty channel. Time is in UTC.
DOI: 10.5281/zenodo.7967386
title: Mitocheck Data Supplementary Files

description: This dataset contains all supplementary files related to the <em>mitocheck_data</em> repository that were too large to upload on GitHub. The compressed folders include extracted and normalized single-cell features from the following subsets of the original screen by MitoCheck Consortium: negative_control_data/ : Nuclei features from negative control cells transfected with scrambled siRNA. positive_control_data/ : Nuclei features from positive control cells transfected with siRNA targeting genes used during mitosis (INCENP, KIF11, COPB1). training_data/ : Nuclei features from cells manually labeled with a phenotypic class by MitoCheck Consortium. More details for the compressed folders are as follows: 1.idr_streams/extracted_features/ : All <em>IDR_stream</em>-extracted single-cell features (CellProfiler, DeepProfiler, merged) for the data subsets of the original MitoCheck Consortium screen. More information can be found in mitocheck_data/1.idr_streams. 3.normalize_data/normalized_data/ : All <em>IDR_stream</em>-extracted single-cell features (CellProfiler, DeepProfiler, merged) normalized with sklearn.preprocessing.StandardScaler. One StandardScaler was derived from the negative control features and applied to all data subsets. More information can be found in mitocheck_data/3.normalize_data. The Image Data Resource (IDR) hosts all data for the original screen by MitoCheck Consortium under accession idr0013 (screenA). Dr. Jean-Karim Heriche and Dr. Thomas Walter of the MitoCheck Consortium shared the manually-assigned phenotypic class labels used in training_data.
DOI: 10.5281/zenodo.7967385
title: Mitocheck Data Supplementary Files

description: This dataset contains all supplementary files related to the <em>mitocheck_data</em> repository that were too large to upload on GitHub. The compressed folders include extracted and normalized single-cell features from the following subsets of the original screen by MitoCheck Consortium: negative_control_data/ : Nuclei features from negative control cells transfected with scrambled siRNA. positive_control_data/ : Nuclei features from positive control cells transfected with siRNA targeting genes used during mitosis (INCENP, KIF11, COPB1). training_data/ : Nuclei features from cells manually labeled with a phenotypic class by MitoCheck Consortium. More details for the compressed folders are as follows: 1.idr_streams/extracted_features/ : All <em>IDR_stream</em>-extracted single-cell features (CellProfiler, DeepProfiler, merged) for the data subsets of the original MitoCheck Consortium screen. More information can be found in mitocheck_data/1.idr_streams. 3.normalize_data/normalized_data/ : All <em>IDR_stream</em>-extracted single-cell features (CellProfiler, DeepProfiler, merged) normalized with sklearn.preprocessing.StandardScaler. One StandardScaler was derived from the negative control features and applied to all data subsets. More information can be found in mitocheck_data/3.normalize_data. The Image Data Resource (IDR) hosts all data for the original screen by MitoCheck Consortium under accession idr0013 (screenA). Dr. Jean-Karim Heriche and Dr. Thomas Walter of the MitoCheck Consortium shared the manually-assigned phenotypic class labels used in training_data.
DOI: 10.5281/zenodo.6460630
title: Dryland aridity

description: <strong>Dryland aridity during Pliocene warmth</strong>
DOI: 10.34740/kaggle/dsv/6468274
title: BBC News
DOI: 10.5281/zenodo.8342762
title: TunSwitch: Code-Switched Tunisian Arabic Speech Dataset

description: We developed a tool for collecting Tunisian dialect data, prompting users to record themselves reading provided phrases. We sourced sentences from Tunisiya. These sentences are consequently removed from the LM training corpus. 89 persons have participated leading to the collection of 2631 distinct phrases. This set will be called TunSwitch TO, ``TO" standing for Tunisian Only, as these sentences do not have non-Tunisian words. In response to the limited availability of paired Text-Speech Tunisian datasets with code-switching, we have built a corpus through meticulous manual annotation. Whenever encountered, French and English words are enclosed within "&lt;&gt;" tags, and left Tunisian words without any enclosing tags. While these tags have not been used in the proposed models, they allow to have language-usage statistics and may be useful for further approaches handling code-switching. The resulting set is released as TunSwitch CS, ``CS" standing for Code-Switched. The TunSwitch CS dataset samples come from a set of radio shows and podcasts, representing diverse topics and a large number of unique speakers. The audio are first segmented into chunks, prioritizing word integrity using the WebRTC-VAD algorithm for silence detection. Afterward, we used a Pyannote overlap detection model to remove overlapping speech sections. Then, a music detection model is employed to eliminate music-containing chunks that could disrupt ASR model accuracy. <br>
DOI: 10.5281/zenodo.8342761
title: TunSwitch: Code-Switched Tunisian Arabic Speech Dataset

description: We developed a tool for collecting Tunisian dialect data, prompting users to record themselves reading provided phrases. We sourced sentences from Tunisiya. These sentences are consequently removed from the LM training corpus. 89 persons have participated leading to the collection of 2631 distinct phrases. This set will be called TunSwitch TO, ``TO" standing for Tunisian Only, as these sentences do not have non-Tunisian words. In response to the limited availability of paired Text-Speech Tunisian datasets with code-switching, we have built a corpus through meticulous manual annotation. Whenever encountered, French and English words are enclosed within "&lt;&gt;" tags, and left Tunisian words without any enclosing tags. While these tags have not been used in the proposed models, they allow to have language-usage statistics and may be useful for further approaches handling code-switching. The resulting set is released as TunSwitch CS, ``CS" standing for Code-Switched. The TunSwitch CS dataset samples come from a set of radio shows and podcasts, representing diverse topics and a large number of unique speakers. The audio are first segmented into chunks, prioritizing word integrity using the WebRTC-VAD algorithm for silence detection. Afterward, we used a Pyannote overlap detection model to remove overlapping speech sections. Then, a music detection model is employed to eliminate music-containing chunks that could disrupt ASR model accuracy. <br>
DOI: 10.17608/k6.auckland.23557017
title: HVN KINGS GASTRIC Metadata Record - Kiwifruit Ingestion to Normalise Gut Symptoms (Gastric) in individuals with Functional Constipation (FC) or Constipation-predominant Irritable Bowel Syndrome (IBS-C)

description: This metadata record and it’s attached files make statements about the kinds of data collected as part of this research, and set out policies for governance of that data, now and in the future.<b>Description:</b> The Kiwifruit Ingestion to Normalise Gut Symptoms (KINGS) study was launched to understand more about the clinical, psychological, biological, and dietary changes in individuals with Functional Constipation (FC) or Constipation-Predominant Irritable Bowel Syndrome (IBS/C). We believe that the approach used in this study can help generate new knowledge beyond that already reported for the consumption of green kiwifruit. The Auckland KINGS Gastric is a second locality for the KINGS in the Christchurch IBS cohort (ACTRN12621000621819), with site-specific study design and secondary outcomes. In this single arm, open-label, intervention study, we aim to assess the impact of habitual consumption of two Green Kiwifruit daily for 4 weeks on abdominal pain, bowel habits and other gastrointestinal symptoms in individuals with FC/IBS-C; and to evaluate the effects of habitual consumption of Green Kiwifruit on digestive function and biomarkers of these physiological effects. Additionally, we hope to investigate the influence of the two Green Kiwifruit intervention on the microbiome and metabolome, and to compare differences between individuals with constipation and healthy controls. The trial will be a maximum of up to 8 weeks in total.
DOI: 10.17608/k6.auckland.23557017.v2
title: HVN KINGS GASTRIC Metadata Record - Kiwifruit Ingestion to Normalise Gut Symptoms (Gastric) in individuals with Functional Constipation (FC) or Constipation-predominant Irritable Bowel Syndrome (IBS-C)

description: This metadata record and it’s attached files make statements about the kinds of data collected as part of this research, and set out policies for governance of that data, now and in the future.<b>Description:</b> The Kiwifruit Ingestion to Normalise Gut Symptoms (KINGS) study was launched to understand more about the clinical, psychological, biological, and dietary changes in individuals with Functional Constipation (FC) or Constipation-Predominant Irritable Bowel Syndrome (IBS/C). We believe that the approach used in this study can help generate new knowledge beyond that already reported for the consumption of green kiwifruit. The Auckland KINGS Gastric is a second locality for the KINGS in the Christchurch IBS cohort (ACTRN12621000621819), with site-specific study design and secondary outcomes. In this single arm, open-label, intervention study, we aim to assess the impact of habitual consumption of two Green Kiwifruit daily for 4 weeks on abdominal pain, bowel habits and other gastrointestinal symptoms in individuals with FC/IBS-C; and to evaluate the effects of habitual consumption of Green Kiwifruit on digestive function and biomarkers of these physiological effects. Additionally, we hope to investigate the influence of the two Green Kiwifruit intervention on the microbiome and metabolome, and to compare differences between individuals with constipation and healthy controls. The trial will be a maximum of up to 8 weeks in total.
DOI: 10.17608/k6.auckland.23557017.v1
title: HVN KINGS GASTRIC Metadata Record - Kiwifruit Ingestion to Normalise Gut Symptoms (Gastric) in individuals with Functional Constipation (FC) or Constipation-predominant Irritable Bowel Syndrome (IBS-C)

description: This metadata record and it’s attached files make statements about the kinds of data collected as part of this research, and set out policies for governance of that data, now and in the future.<b>Description:</b> The Kiwifruit Ingestion to Normalise Gut Symptoms (KINGS) study was launched to understand more about the clinical, psychological, biological, and dietary changes in individuals with Functional Constipation (FC) or Constipation-Predominant Irritable Bowel Syndrome (IBS/C). We believe that the approach used in this study can help generate new knowledge beyond that already reported for the consumption of green kiwifruit. The Auckland KINGS Gastric is a second locality for the KINGS in the Christchurch IBS cohort (ACTRN12621000621819), with site-specific study design and secondary outcomes. In this single arm, open-label, intervention study, we aim to assess the impact of habitual consumption of two Green Kiwifruit daily for 4 weeks on abdominal pain, bowel habits and other gastrointestinal symptoms in individuals with FC/IBS-C; and to evaluate the effects of habitual consumption of Green Kiwifruit on digestive function and biomarkers of these physiological effects. Additionally, we hope to investigate the influence of the two Green Kiwifruit intervention on the microbiome and metabolome, and to compare differences between individuals with constipation and healthy controls. The trial will be a maximum of up to 8 weeks in total.
DOI: 10.25493/kr8j-06u
title: Human intracranial recordings of consequential decision-making in the frontoparietal cortex (v1)

description: In goal-oriented interactions with the environment, organizing actions into sequences is vital to anticipate outcomes in complex decision-making processes, even if it means prioritizing long-term gains over immediate convenience. We performed invasive human recordings in the frontoparietal cortex, to understand how the brain activity in these areas reflects the evaluation of consequences in multi-step processes. Four patients with refractory neuropathic facial pain were implanted with 16-channel epidural electrode grids (Specify 5-6-5, Medtronic) targeting the primary motor cortex (M1) and covering a broad region of the central frontoparietal cortex. We recorded from 80 channels in total (patient 2 was implanted with 2 grids that covered bilateral frontoparietal cortex). The patients performed a consequential task aimed at maximizing cumulative reward through decision sequences. The trials were organized into independent sessions or grouped into episodes of one or two trials. The subjects were required to discover the optimal strategy leading to the highest cumulative reward. We share both behavioral (reaction times, and performance) and neural data (pre-processed Local Field Potentials). The invasively recorded data from patients provides an invaluable opportunity to impose physical constraints on computational models, and refine and validate them, ensuring alignment with actual neural processes observed in the human and shedding light on the neural mechanisms underlying decision-making.
DOI: 10.17608/k6.auckland.23961801
title: HVN NZ-INDES Metadata Record - The New Zealand Indigo Naturalis Dose-Escalation Study

description: This metadata record and it's attached files make statements about the kinds of data collected as part of this research, and set out policies for governance of that data, now and in the future.<b>Description:</b> This is a single dose open-label dose-escalation pilot study. Following a lead-in period for screening, recruitment, participants will be allocated to a zero-dose control group or different Indigo naturalis dose groups. The study involves a single 24 h intervention period over two study visits. Participants will be self-reported healthy adults (male or female, 18 – 65 years old), which represent the adult general population residing in Wellington, New Zealand. Following informed consent, the first five participants will take capsules containing 2 g of microcrystalline cellulose (zero-dose control group). The next group of five participants will take the lowest dose of Indigo naturalis. If data analysis of the lowest dose shows no detrimental effect on liver function, the next group of 5 individuals will take the next dose (0.5 g) of the herbal medicine and so on. If we find a consistent, significant change in blood AhR activity in plasma and/or PBMCs in this pilot study, we intent to subsequently conduct a follow up study involving administering Indigo naturalis in people with inflammatory conditions, such those associated with obesity, metabolic syndrome, diabetes or liver steatosis.