cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/pnt-a63-abs
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.29405465.v1
title: CYP450 Gene Polymorphisms and the Risk of Taxane-Induced Neurotoxicity in Breast Cancer Patients: A Systematic Review and Meta-Analysis

description: Breast cancer (BC) is the most common cancer in women. Taxanes are widely used, but their neurotoxicity affects patients' quality of life. Genetic polymorphisms in CYP450 enzymes influence taxane metabolism, leading to variability in toxicity risk. A literature search was conducted to identify studies on the association between CYP450 polymorphisms and Taxane-Induced Peripheral Neuropathy (TIPN) in BC patients. Odds ratios (OR) and hazard ratios (HR) with 95% confidence intervals (CI) were estimated using a random-effects model in RStudio. Nine studies with 3034 patients were included. Overall CYP polymorphisms showed a significant association with TIPN (OR: 1.2877, 95% CI: 1.0262–1.6157). CYP1B1 polymorphism had an inconsistent link to TIPN by OR of 1.1524 (95% CI: 0.7441–1.7849). CYP2C8 polymorphism demonstrated the strongest association (OR: 1.5532, 95% CI: 1.2013–2.0082; HR: 1.5236, 95% CI: 1.1317–2.0512). CYP3A4 showed no significant association (OR: 1.0988, 95% CI: 0.5022–2.4404). CYP2C8 polymorphisms were significantly linked to TIPN. While CYP1B1 showed inconsistent results, CYP3A4 had no significant association. These findings imply that CYP2C8 genetic variations may affect taxane metabolism and neurotoxicity risk, indicating that pharmacogenomic profiling could help personalize chemotherapy and reduce adverse effects.
DOI: 10.3535/9vf-0z8-k1n
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c99-evw-fn5
title: Tyto Billberg, 1828

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.18235900
title: Ephedrales Dumort. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 15:52
DOI: 10.5281/zenodo.18235899
title: Ephedrales Dumort. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 15:52
DOI: 10.15468/dl.ykwm9r
title: Occurrence Download

description: A dataset containing 2628 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Norway",
 "DatasetKey is one of (Birds and other animals from Fuglevennen.no, NHMO Mammal collection, Observation.org, Nature data from around the World, iNaturalist Research-grade Observations, Norwegian Biodiversity Information Centre - Other datasets, Naturbase - funksjonsområder for arter, NABU|naturgucker, Mammal collection NTNU University Museum, Mammal collection (TSZM) The Arctic University Museum of Norway)",
 "OccurrenceStatus is Present",
 "TaxonKey is Lepus timidus Linnaeus, 1758"
 ]
}

 The dataset includes 2628 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011660-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5v7caa
title: Occurrence Download

description: A dataset containing 547987 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gymnolaemata"
 ]
}

 The dataset includes 547987 records from 748 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011644-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.28838.79687
title: Charlcombe Meadows Bioblitz
DOI: 10.6084/m9.figshare.26048740
title: Wing morphometric analysis using smartphone images and a free MATLAB-based tool: a case study with <i>Apis mellifera</i> from the Balearic Islands

description: This study was designed to validate the new software WingMarks2 for the fully automatic and complete geometric morphometric analysis of the forewing venation structure in the honey bee and to apply this software for the morphometric analysis of <i>Apis mellifera iberiensis</i> in the Balearic Islands. Three experiments were performed to evaluate the ability of WingMarks2 software to analyze wing images obtained with different optical equipment (experiment 1), to check its ability to discriminate between six subspecies of <i>Apis mellifera</i> (experiment 2), to compare WingMarks2 and DeepWings software programs in their capabilities for detecting wing landmarks and associating them with specific subspecies (experiment 3) and to determine if there is a morphometric differentiation of <i>A. m. iberiensis</i> in the Balearic Islands when compared to those of the Iberian Peninsula (experiment 4). In experiment 1, WingMarks2 software allowed the automatic and accurate analysis of 91.7%, 95.2%, and 91.5% of the wings analyzed when using Leica microscope, Celestron USB microscope and Xiaomi Smartphone images, respectively. The results of experiment 2 showed that, overall, the cross-validated correct identification rate was 97.4% for the subspecies as a whole and ranged between 94% and 100% for the individual subspecies. In experiment 3, WingMarks2 proved more efficient than DeepWings in correctly processing the wings and assigning them to the subspecies. Finally, in experiment 4, the application of the new WingMarks2 software allowed us to identify a morphometric differentiation of <i>A. m. iberiensis</i> in the Balearic Islands when compared to those of the Iberian Peninsula.
DOI: 10.6084/m9.figshare.26048740.v1
title: Wing morphometric analysis using smartphone images and a free MATLAB-based tool: a case study with <i>Apis mellifera</i> from the Balearic Islands

description: This study was designed to validate the new software WingMarks2 for the fully automatic and complete geometric morphometric analysis of the forewing venation structure in the honey bee and to apply this software for the morphometric analysis of <i>Apis mellifera iberiensis</i> in the Balearic Islands. Three experiments were performed to evaluate the ability of WingMarks2 software to analyze wing images obtained with different optical equipment (experiment 1), to check its ability to discriminate between six subspecies of <i>Apis mellifera</i> (experiment 2), to compare WingMarks2 and DeepWings software programs in their capabilities for detecting wing landmarks and associating them with specific subspecies (experiment 3) and to determine if there is a morphometric differentiation of <i>A. m. iberiensis</i> in the Balearic Islands when compared to those of the Iberian Peninsula (experiment 4). In experiment 1, WingMarks2 software allowed the automatic and accurate analysis of 91.7%, 95.2%, and 91.5% of the wings analyzed when using Leica microscope, Celestron USB microscope and Xiaomi Smartphone images, respectively. The results of experiment 2 showed that, overall, the cross-validated correct identification rate was 97.4% for the subspecies as a whole and ranged between 94% and 100% for the individual subspecies. In experiment 3, WingMarks2 proved more efficient than DeepWings in correctly processing the wings and assigning them to the subspecies. Finally, in experiment 4, the application of the new WingMarks2 software allowed us to identify a morphometric differentiation of <i>A. m. iberiensis</i> in the Balearic Islands when compared to those of the Iberian Peninsula.
DOI: 10.6084/m9.figshare.25712798
title: Intestinal microbial diversity in domestic honey bees and evaluation of their probiotic properties

description: As populations of managed honey bees in various regions increase in comparison to wild colonies, there is a need to ensure that threats to bee health and survival in all environments are countered. One of the more direct methods of approaching bee health is through dietary means and as such, we investigated the intestinal microbial diversity in the gut of honey bees in order to identify strains with probiotic potential. Honey bees were fed with several feeds including Feedbee, Megabee, sugar syrup 60% (<i>w/v</i>), Yangbongnonghyup (YBNH), and Test A, to monitor the culture-dependent and culture-independent microbial diversity. In the culture-dependent study, most isolates belonged to <i>Apilactobacillus</i> (24.1%), <i>Fructobacillus</i> (21.8%), and <i>Bacillus</i> (15.4%) at the genus level. Culture-independent results showed that <i>Bacillota</i> and <i>Pseudomonadota</i> were the most abundant groups (99%) among the gut bacteria, while other bacteria showed a lower percentage than 0.1%. Next, the hydrolytic enzymes (α-amylase, protease, and cellulase) and antibacterial and antioxidant activities of the isolated strains were evaluated to examine their applicability as potential probiotics for honey bees. The selected strains showing three hydrolytic enzyme activities were used to determine their antibacterial activity against <i>Paenibacillus larvae. Bacillus subtilis</i> MBLB2796 showed the highest α-amylase (1.24 ± 0.06 U/mL) and cellulase (0.24 ± 0.01 U/mL) activities while <i>B. tequilensis</i> MBLB2834 exhibited the highest protease activity (0.15 ± 0.03 mU/mL) and the highest antioxidant activity (71.0 ± 3.8%). This study suggests that honey bee gut-originated isolates are prime candidates for use as probiotics in honey bees.
DOI: 10.6084/m9.figshare.25712798.v1
title: Intestinal microbial diversity in domestic honey bees and evaluation of their probiotic properties

description: As populations of managed honey bees in various regions increase in comparison to wild colonies, there is a need to ensure that threats to bee health and survival in all environments are countered. One of the more direct methods of approaching bee health is through dietary means and as such, we investigated the intestinal microbial diversity in the gut of honey bees in order to identify strains with probiotic potential. Honey bees were fed with several feeds including Feedbee, Megabee, sugar syrup 60% (<i>w/v</i>), Yangbongnonghyup (YBNH), and Test A, to monitor the culture-dependent and culture-independent microbial diversity. In the culture-dependent study, most isolates belonged to <i>Apilactobacillus</i> (24.1%), <i>Fructobacillus</i> (21.8%), and <i>Bacillus</i> (15.4%) at the genus level. Culture-independent results showed that <i>Bacillota</i> and <i>Pseudomonadota</i> were the most abundant groups (99%) among the gut bacteria, while other bacteria showed a lower percentage than 0.1%. Next, the hydrolytic enzymes (α-amylase, protease, and cellulase) and antibacterial and antioxidant activities of the isolated strains were evaluated to examine their applicability as potential probiotics for honey bees. The selected strains showing three hydrolytic enzyme activities were used to determine their antibacterial activity against <i>Paenibacillus larvae. Bacillus subtilis</i> MBLB2796 showed the highest α-amylase (1.24 ± 0.06 U/mL) and cellulase (0.24 ± 0.01 U/mL) activities while <i>B. tequilensis</i> MBLB2834 exhibited the highest protease activity (0.15 ± 0.03 mU/mL) and the highest antioxidant activity (71.0 ± 3.8%). This study suggests that honey bee gut-originated isolates are prime candidates for use as probiotics in honey bees.
DOI: 10.6084/m9.figshare.25576875
title: Comb age significantly influences the emergency queen rearing, morphometric and reproductive characteristics of the queens

description: A study on the impact of comb age on the number of emergency queen cells and ripped queen cells was conducted. Also, we compared morphometric and reproductive characteristics of queens reared in combs aged 1, 2, 3, and 4 years. The highest number of emergency queen cells was constructed in combs aged 1 year on the 2nd day after dequeening. No more queen cells were constructed after the 5th day of dequeening. The highest numbers of successful queen cells and emerged queens were obtained from the new combs. The amount of royal jelly (RJ)/queen cell, the weight of the newly emerged queen, and the queen cell size significantly decreased with increasing the age of the comb. Compared with the newly emerged queens from combs aged 1 year, the queens from combs aged 3 and 4 years exhibited significantly lower values for antenna length, mandibular gland area, forewing area, number of hamuli, area of the 3rd and 4th abdominal tergites, abdomen length, number of ovarioles/ovary, ovariole length and diameter, and spermathecal size. Significant positive correlations between the queen cell size and RJ yield/queen cell, queen body weight, and all queen characteristics except for the hindwing area were found. It can be concluded that the number of reared queens and their morphometrics and reproductive characteristics were significantly dependent on the age of the combs. The queen’s body size can be used as an indicator of the queen’s quality.
DOI: 10.6084/m9.figshare.25576875.v1
title: Comb age significantly influences the emergency queen rearing, morphometric and reproductive characteristics of the queens

description: A study on the impact of comb age on the number of emergency queen cells and ripped queen cells was conducted. Also, we compared morphometric and reproductive characteristics of queens reared in combs aged 1, 2, 3, and 4 years. The highest number of emergency queen cells was constructed in combs aged 1 year on the 2nd day after dequeening. No more queen cells were constructed after the 5th day of dequeening. The highest numbers of successful queen cells and emerged queens were obtained from the new combs. The amount of royal jelly (RJ)/queen cell, the weight of the newly emerged queen, and the queen cell size significantly decreased with increasing the age of the comb. Compared with the newly emerged queens from combs aged 1 year, the queens from combs aged 3 and 4 years exhibited significantly lower values for antenna length, mandibular gland area, forewing area, number of hamuli, area of the 3rd and 4th abdominal tergites, abdomen length, number of ovarioles/ovary, ovariole length and diameter, and spermathecal size. Significant positive correlations between the queen cell size and RJ yield/queen cell, queen body weight, and all queen characteristics except for the hindwing area were found. It can be concluded that the number of reared queens and their morphometrics and reproductive characteristics were significantly dependent on the age of the combs. The queen’s body size can be used as an indicator of the queen’s quality.
DOI: 10.6084/m9.figshare.25858632
title: Physicochemical, microbiological, and sensory properties of stingless bee honey from Argentina

description: The physicochemical parameters, antioxidant activity, and sensory properties were determined in stingless bee honeys from two bee species and different phytogeographic regions of the Chaco province (Argentina). All honeys showed similar moisture content, colour, and hydroxymethyl furfural concentration. The samples from the oriental estuaries showed the lowest free acidity, ash content, and electrical conductivity. The honey produced by <i>Tetragonisca fiebrigi</i> (Schwarz) had a higher ash content than honeys produced by <i>Scaptotrigona juju</i>y<i>ensis</i> (Schrottky). However, the electrical conductivity of honeys produced by both bee species was similar. The HPLC sugar analysis, total polyphenol and flavonoid content, and antioxidant activity (ABTS) showed no significant differences between the different geographic zones or bee species. The wood aroma and sweet taste were chosen as the best sensory descriptors of the honeys. The results of the multivariate techniques used showed that is not possible to classify honeys according to its geographical origin or bee species. Most of the honey samples meet the required microbiological standards and could be considered safe for consumption.
DOI: 10.6084/m9.figshare.25858632.v1
title: Physicochemical, microbiological, and sensory properties of stingless bee honey from Argentina

description: The physicochemical parameters, antioxidant activity, and sensory properties were determined in stingless bee honeys from two bee species and different phytogeographic regions of the Chaco province (Argentina). All honeys showed similar moisture content, colour, and hydroxymethyl furfural concentration. The samples from the oriental estuaries showed the lowest free acidity, ash content, and electrical conductivity. The honey produced by <i>Tetragonisca fiebrigi</i> (Schwarz) had a higher ash content than honeys produced by <i>Scaptotrigona juju</i>y<i>ensis</i> (Schrottky). However, the electrical conductivity of honeys produced by both bee species was similar. The HPLC sugar analysis, total polyphenol and flavonoid content, and antioxidant activity (ABTS) showed no significant differences between the different geographic zones or bee species. The wood aroma and sweet taste were chosen as the best sensory descriptors of the honeys. The results of the multivariate techniques used showed that is not possible to classify honeys according to its geographical origin or bee species. Most of the honey samples meet the required microbiological standards and could be considered safe for consumption.
DOI: 10.6084/m9.figshare.26069176
title: Ant (Hymenoptera: Formicidae) pests of honey bee colonies in Cameroon

description: Global reports of ant-honey bee interactions show that the former threatens the latter’s existence and the sustainability of the beekeeping sector. However, little is known about existing ant species and their impact on managed honey bees, especially in Africa. This research identifies ant species and their interactions with managed honey bee colonies in Cameroon.
DOI: 10.6084/m9.figshare.26069176.v1
title: Ant (Hymenoptera: Formicidae) pests of honey bee colonies in Cameroon

description: Global reports of ant-honey bee interactions show that the former threatens the latter’s existence and the sustainability of the beekeeping sector. However, little is known about existing ant species and their impact on managed honey bees, especially in Africa. This research identifies ant species and their interactions with managed honey bee colonies in Cameroon.
DOI: 10.6084/m9.figshare.25525963
title: Pathogens may affect wing morphology in <i>Apis mellifera</i> (L.) workers

description: Geometric morphometrics is used to study the shape of biological structures through cartesian landmark coordinates. In honey bees, geometric morphometrics is typically applied to the bee forewings for subspecies identification. Both genetic and environmental factors may affect honey bee wing morphology, the latter including nutritional status, brood temperature, and Varroa infestation. Honey bees are threatened by several pathogens that can infect the juvenile stages, so impairing their development. Consequently, an effect on wing morphology can be postulated. This work aimed to investigate for the first time the effect of some major bee pathogens (DWV, KBV, ABPV, CBPV, and <i>Nosema ceranae</i>) on the honey bee wing morphology (size, shape, and fluctuating asymmetry). Honey bee worker forewings from six Italian regions were analysed. All the researched pathogens, as well as multiple infections, significantly affected both wing shape and size. DWV, the simultaneous co-infection with DWV, CBPV, and <i>N. ceranae</i>, and the total number of co-infecting pathogens were significantly associated with wing fluctuating asymmetry in both shape and size. In addition, <i>N. ceranae</i> was significantly associated with wing shape asymmetry. Our results showed that pathogens may affect honey bee wing morphology. However, we cannot rule out a colony-mediated effect on the impairment suffered by the individuals. Further experiments, including artificial infections, can help to clarify the importance of individual pathogens in the detected wing morphological alterations.
DOI: 10.6084/m9.figshare.25525963.v1
title: Pathogens may affect wing morphology in <i>Apis mellifera</i> (L.) workers

description: Geometric morphometrics is used to study the shape of biological structures through cartesian landmark coordinates. In honey bees, geometric morphometrics is typically applied to the bee forewings for subspecies identification. Both genetic and environmental factors may affect honey bee wing morphology, the latter including nutritional status, brood temperature, and Varroa infestation. Honey bees are threatened by several pathogens that can infect the juvenile stages, so impairing their development. Consequently, an effect on wing morphology can be postulated. This work aimed to investigate for the first time the effect of some major bee pathogens (DWV, KBV, ABPV, CBPV, and <i>Nosema ceranae</i>) on the honey bee wing morphology (size, shape, and fluctuating asymmetry). Honey bee worker forewings from six Italian regions were analysed. All the researched pathogens, as well as multiple infections, significantly affected both wing shape and size. DWV, the simultaneous co-infection with DWV, CBPV, and <i>N. ceranae</i>, and the total number of co-infecting pathogens were significantly associated with wing fluctuating asymmetry in both shape and size. In addition, <i>N. ceranae</i> was significantly associated with wing shape asymmetry. Our results showed that pathogens may affect honey bee wing morphology. However, we cannot rule out a colony-mediated effect on the impairment suffered by the individuals. Further experiments, including artificial infections, can help to clarify the importance of individual pathogens in the detected wing morphological alterations.
DOI: 10.15468/dl.jdg87s
title: Occurrence Download

description: A dataset containing 3681 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aplonis minor)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 3681 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081757-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzy9ft
title: Occurrence Download

description: A dataset containing 1397 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aplonis mysolensis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 1397 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081759-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mu4zp8
title: Occurrence Download

description: A dataset containing 385 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lasioglossum perdifficile"
 ]
}

 The dataset includes 385 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081758-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16285826
title: LLMs for code quality SLR
DOI: 10.5281/zenodo.16285827
title: LLMs for code quality SLR