cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18622955
title: Astrometric microlensing probes of the isolated neutron star population with Roman

description: Catalogues of simulated microlensing events generated in the work "Astrometric microlensing probes of the isolated neutron star population with Roman".This resource contains:

1. Events detectable in our simulated GBTDS survey:



gbtds_ns_kick_{v}.csv (where v = (150, 250, 350, 450) - contains simulated events with neutron star (NS) lenses in the simulation where NS are given the mean natal kick v [km/s].All columns are as returned in the PopSyCLE output ('_refined_events.fits' file), except the last column 'weight' which contains a correction for spatial distribution of kicked remnants in the present-day Galaxy (described in Section 4.1 of the paper).

gbtds_bh_kick_100.csv - contains simulated events with black hole lenses, which are the same for each simulation (with a mean natal kick of 350 km/s). All columns as for NS.

gbtds_star_wd.csv - contains simulated events with stellar and white dwarf lenses, which are the same for each simulation. As no re-weighing is applied, all columns are as in PopSyCLE output.


2. All events:



all_events.csv - contains all simulated events regardless of their detectability. All columns except the last four are as returned in the PopSyCLE output.The additional columns 'mag_det', 'phot_det', and 'ast_det' are flags for source passing the maximum magnitude detectability cut, photometric microlensing signal detectability, and astrometric microlensing signal detectability, respectively. These flags are set to 0 if the event does not pass the cut and 1 if it passes the cut. Additionally, as astrometric detectability was expensive to compute, it was only checked for events already passing the other two cuts; 'ast_det' is set to -1 if it was not checked.The additional column 'ns_kick' is set to the mean kick velocity for NS lenses to indicate belonging to either of the 4 simulations, and is set to -1 for all lenses that are not NS.This dataset is recommended if users choose to apply their own detectability cuts.
DOI: 10.5281/zenodo.18622956
title: Astrometric microlensing probes of the isolated neutron star population with Roman

description: Catalogues of simulated microlensing events generated in the work "Astrometric microlensing probes of the isolated neutron star population with Roman".This resource contains:

1. Events detectable in our simulated GBTDS survey:



gbtds_ns_kick_{v}.csv (where v = (150, 250, 350, 450) - contains simulated events with neutron star (NS) lenses in the simulation where NS are given the mean natal kick v [km/s].All columns are as returned in the PopSyCLE output ('_refined_events.fits' file), except the last column 'weight' which contains a correction for spatial distribution of kicked remnants in the present-day Galaxy (described in Section 4.1 of the paper).

gbtds_bh_kick_100.csv - contains simulated events with black hole lenses, which are the same for each simulation (with a mean natal kick of 350 km/s). All columns as for NS.

gbtds_star_wd.csv - contains simulated events with stellar and white dwarf lenses, which are the same for each simulation. As no re-weighing is applied, all columns are as in PopSyCLE output.


2. All events:



all_events.csv - contains all simulated events regardless of their detectability. All columns except the last four are as returned in the PopSyCLE output.The additional columns 'mag_det', 'phot_det', and 'ast_det' are flags for source passing the maximum magnitude detectability cut, photometric microlensing signal detectability, and astrometric microlensing signal detectability, respectively. These flags are set to 0 if the event does not pass the cut and 1 if it passes the cut. Additionally, as astrometric detectability was expensive to compute, it was only checked for events already passing the other two cuts; 'ast_det' is set to -1 if it was not checked.The additional column 'ns_kick' is set to the mean kick velocity for NS lenses to indicate belonging to either of the 4 simulations, and is set to -1 for all lenses that are not NS.This dataset is recommended if users choose to apply their own detectability cuts.
DOI: 10.15468/dl.6jpv6w
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cerbera dumicola",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 70 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011913-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsmrtu
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Loricaria spinulifera",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011914-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/7nwk9t
title: Myrmica scabrinodis and its ectoparasite Rickia wasmannii (Ruczaj, Kraków, Poland 2022)

description: The dataset consists of occurrences of Myrmica scabrinodis nests, which were collected in May 2022 to study ants' task switching and immune response in the context of fungal ectoparasite infection. Fungal parasite - Rickia wasmannii occurrences have presence/absence data.
DOI: 10.15468/dl.azcbrx
title: Occurrence Download

description: A dataset containing 7273 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nocomis biguttatus",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 7273 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011912-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18623325
title: Parathyroid Hormone–Calcium Dysregulation, Aquaporin-4, and Glymphatic Vulnerability

description: Aging-Related PTH Dysregulation as an Upstream Modifier of Glymphatic Vulnerability
DOI: 10.5281/zenodo.18623326
title: Parathyroid Hormone–Calcium Dysregulation, Aquaporin-4, and Glymphatic Vulnerability

description: Aging-Related PTH Dysregulation as an Upstream Modifier of Glymphatic Vulnerability
DOI: 10.15468/dl.f8zgmu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthocephaloides distinctus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011915-260208012135463/datasets/export for details.
DOI: 10.5281/zenodo.18498677
title: Mass spectrometry data from whole cell extractions of Mycobacterium tuberculosis H37Rv using collision induced dissociation to identify terpene nucleosides

description: Whole lipid extracts of Mycobacterium tuberculosis H37Rv were analyzed by collision induced dissociation (CID) mass spectrometry to validate masses identified as terpene nucleosides. Identities were supported using fragments generated at the retention time, m/z, and collision energy provided in the method list. These data are raw data files used to generate figures and conclusions presented in the manuscript (DOI: 10.1371/journal.pbio.3002813). Data analysis was performed using the code provided in Dataset S3 (DOI: 10.5281/zenodo.8096634).
DOI: 10.5281/zenodo.18498678
title: Mass spectrometry data from whole cell extractions of Mycobacterium tuberculosis H37Rv using collision induced dissociation to identify terpene nucleosides

description: Whole lipid extracts of Mycobacterium tuberculosis H37Rv were analyzed by collision induced dissociation (CID) mass spectrometry to validate masses identified as terpene nucleosides. Identities were supported using fragments generated at the retention time, m/z, and collision energy provided in the method list. These data are raw data files used to generate figures and conclusions presented in the manuscript (DOI: 10.1371/journal.pbio.3002813). Data analysis was performed using the code provided in Dataset S3 (DOI: 10.5281/zenodo.8096634).
DOI: 10.15468/dl.s89h34
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen, Living Specimen, Occurrence evidence)",
 "GadmGid is USA.40_1",
 "TaxonKey is Bombus affinis"
 ]
}

 The dataset includes 17 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011916-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5ff3md3f
title: MassIVE MSV000100822 - Data_GC-MS_For_paper_Trametes_Melani
title: Data_GC-MS_For_paper_Trametes_Melani, data para tratamiento de datos en MS/hub para obtencion de metabolitos presentes en hongos del colonso chalupas ecuador
DOI: 10.7281/t1khiqat
title: Code associated with the publication: Low levels of H5N1 HA and NA antibodies in the human population are boosted by seasonal A/H1N1 infection but not by A/H3N2 infection or influenza vaccination

description: An increase in the number of human cases of influenza A/H5N1 infection in the US has raised concerns about the pandemic potential of the virus. Preexisting population immunity is a key determinant for risk assessment and pandemic potential for influenza virus. Antibody responses against the bovine A/H5N1 hemagglutinin (HA) and neuraminidase (NA) proteins were measured among a population of influenza-vaccinated or influenza-infected individuals. Modest titers of bovine A/H5N1 HA-binding antibodies and low to undetectable neutralizing antibody responses were detected in a cohort of 73 individuals. Conversely, bovine A/H5N1 NA binding and neuraminidase-inhibiting antibody responses were comparable to those against a human A/H1N1 NA at baseline. Seasonal influenza vaccination failed to significantly increase antibody titers against both HA and NA glycoproteins of bovine A/H5N1. Recent infection with human A/H1N1 but not A/H3N2 viruses induced significant increases in bovine A/H5N1 neutralizing antibody, as well as increases in NA-binding and NA-inhibiting antibodies to bovine A/H5N1 NA. While the degree of protection afforded by these A/H5N1 cross-reactive antibodies is not known, incorporating NA or enhancing current seasonal vaccine formulations to increase NA-specific antibody responses may increase antibody breadth and protection against both seasonal and pandemic influenza viruses.
DOI: 10.15468/dl.6snm54
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Loricariichthys hauxwelli",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 10 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011917-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q6gx3c
title: Occurrence Download

description: A dataset containing 18278 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhinichthys atratulus",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 18278 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011918-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x7yjbb
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vachellia eburnea",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 21 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011919-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tdyyab
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cerberiopsis obtusifolia",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 25 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011920-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15879506
title: Particle data and statistics from multiple realisations of discrete fracture network simulations

description: Description for file "simulation-particle-data.csv".

First row is header information. Each following row provides values for particle trajectories. The columns are as follows: 

Column 1, label "seed":    Seed used for generating DFN realisation.

Column 2, label "real":    Realisation number of the DFN.

Column 3, label "avf":    Parameter controlling variance, as follows:   0   indicates no variance (smooth fractures).   0.1 indicates low variance.   0.3 indicates high variance.

Column 4, label "sdx":    Parameter controlling correlation length, as follows:   0   indicates no correlation (smooth fractures).   0.1 indicates short correlation length.   1.0 indicates long correlation length.

Column 5, label "q":    Volumetric flux of water at location of particle (m3/s).   Used for obtaining flux injection mode.

Column 6, label "t":    Normalised particle travel time for entire trajectory (-).

Column 7, label "b":    Normalised particle transport resistance for entire trajectory (-). 

Column 8, label "l":    Normalised trajectory length, tortuosity (-). 

Column 9, label "logt":    Base-10 logarithm of normalised particle travel time. 

Column 10, label "logb":    Base-10 logarithm of normalised particle transport resistance.
DOI: 10.5281/zenodo.15879507
title: Particle data and statistics from multiple realisations of discrete fracture network simulations

description: Description for file "simulation-particle-data.csv".

First row is header information. Each following row provides values for particle trajectories. The columns are as follows: 

Column 1, label "seed":    Seed used for generating DFN realisation.

Column 2, label "real":    Realisation number of the DFN.

Column 3, label "avf":    Parameter controlling variance, as follows:   0   indicates no variance (smooth fractures).   0.1 indicates low variance.   0.3 indicates high variance.

Column 4, label "sdx":    Parameter controlling correlation length, as follows:   0   indicates no correlation (smooth fractures).   0.1 indicates short correlation length.   1.0 indicates long correlation length.

Column 5, label "q":    Volumetric flux of water at location of particle (m3/s).   Used for obtaining flux injection mode.

Column 6, label "t":    Normalised particle travel time for entire trajectory (-).

Column 7, label "b":    Normalised particle transport resistance for entire trajectory (-). 

Column 8, label "l":    Normalised trajectory length, tortuosity (-). 

Column 9, label "logt":    Base-10 logarithm of normalised particle travel time. 

Column 10, label "logb":    Base-10 logarithm of normalised particle transport resistance.
DOI: 10.15468/dl.hzbr6c
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthocephaloides geneticus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011922-260208012135463/datasets/export for details.
DOI: 10.15468/dl.cj4qbt
title: Occurrence Download

description: A dataset containing 38482 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is USA.46_1",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Hesperiidae, Lycaenidae, Nymphalidae, Papilionidae, Pieridae, Riodinidae)"
 ]
}

 The dataset includes 38482 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011921-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a6ju4f
title: Occurrence Download

description: A dataset containing 116010 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "TaxonKey is Canis lupus"
 ]
}

 The dataset includes 116010 records from 477 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011834-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r5psp8
title: Occurrence Download

description: A dataset containing 188 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Loricariichthys maculatus",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 188 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011924-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.emgcux
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ceropegia sandersonii",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 51 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011925-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vzfus5
title: Occurrence Download

description: A dataset containing 17040 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Etheostoma flabellare",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 17040 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011923-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18623274
title: vOTUs and MAGs were recovered from sediment samples collected in the CCZ

description: vOTUs (CCZV.fa) and MAGs (CCZ_MAGs.tar.gz) were recovered from sediment samples collected in the CCZ.
DOI: 10.5281/zenodo.18623273
title: vOTUs and MAGs were recovered from sediment samples collected in the CCZ

description: vOTUs (CCZV.fa) and MAGs (CCZ_MAGs.tar.gz) were recovered from sediment samples collected in the CCZ.
DOI: 10.15468/dl.p47527
title: Occurrence Download

description: A dataset containing 6958 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Schoenoplectus americanus"
 ]
}

 The dataset includes 6958 records from 340 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011927-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18623504
title: LINF_330008000

description: WD40 domain protein | CstF1-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.18623503
title: LINF_330008000

description: WD40 domain protein | CstF1-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.9hxwt5
title: Occurrence Download

description: A dataset containing 515 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eremophila alpestris strigata"
 ]
}

 The dataset includes 515 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011930-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdrhfc
title: Occurrence Download

description: A dataset containing 443 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Continent is one of (South America, North America)",
 "Country is one of (Costa Rica, Colombia, Venezuela (Bolivarian Republic of), Panama)",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Herpetology Collection NRM)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (28eb1a3f-1c15-4a95-931a-4af90ecb574d, 6ba9a8cc-513a-4a51-bf93-6f5de8040a96)",
 "TaxonKey is Phyllobates"
 ]
}

 The dataset includes 443 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011932-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ubvupm
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Loricariichthys nudirostris",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 69 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011931-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sp7n3y
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chamaeclitandra henriquesiana",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 20 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011935-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.