cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/udvrl6
title: Collection ornithologique A. Maës

description: Albert Maës (1845-1914). D'une famille d'industriels (Cristallerie de Clichy), il a vécu de ses rentes sur la propriété des Muids (Loiret, France). Il deviendra membre correspondant de la société scientifique de l’Ouest de la France en 1891 et membre de la société zoologique de France en 1893 et le restera jusqu’à sa mort. Il participa au IIIe congrès ornithologique mondial (26-30 juin 1900). Il sera l’ami du Père David, échangera avec Von Berlepsch, Bureau (Nantes) et donnera même de nombreuses peaux au muséum de Genève. Après la mort de sa mère en 1906, il habitera régulièrement au domicile de ses parents, 164 faubourgs Saint-honoré, à Paris. Il fera partie du comité de rédaction de "La Revue Française d'Ornithologie" de mai 1910 à janvier 1914. Sa collection (tous les oiseaux sont montés) a été léguée au Muséum National, Gabriel Foucher en étant son conservateur désigné. A la création du Muséum de Bourges par Gabriel Foucher (en 1931), 6500 spécimens (sur 7600), avec 68 vitrines, sont transférés à Bourges où ils étaient exposés dès l'inauguration. 800 spécimens ont été conservés par le Muséum National d'Histoire Naturelle (Paris). L'inventaire original manuscrit de la collection, dressé par L. Barry (le préparateur de Maës), est conservé au MNHN. Au muséum de Bourges, il reste environ 5500 spécimens. Au cours de sa vie de collectionneur, il a fait plusieurs dons et échanges (en 1892, 1893, 1897 et 1903) avec le MNHN (Paris) et un certain nombre de pièces de sa collection proviennent de là. Une rubrique nécrologique dans le bulletin de la Soc. Zool. de France en 1915 et une autre dans le Bulletin de la Soc. Zool. de Genève, 1919. Il est enterré au cimetière du Père Lachaise (Paris). Les collectes s'échelonnent de 1860 à 1914. La collection est accessible, sur rendez-vous.
DOI: 10.15468/w7c3nf
title: UWIZM Odonata

description: This dataset contains most of the records from the Odonata in the UWIZM collections.
DOI: 10.1594/pangaea.250662
title: Planktic foraminifera abundance of Hole 76-534

description: Relative abundance: D = dominant, A = abundant, C = common, F = few, R = rare, T = trace, P = present (numerical values are abundance in percent)
DOI: 10.1594/pangaea.398200
title: Benthic foraminifera (dead assemblages) in surface sediments from the Pakistan continental margin

description: Dead foraminifera from 2-3 cm sediment depth, slice 25.5 cm**2
DOI: 10.1594/pangaea.80226
title: Coccolithophores in surface sediments of the Arabian Sea (TAble 1)

description: One hundred surface sediment samples of the Arabian Sea (Indian Ocean) were investigated and relative abundances of coccoliths were compared to mean annual gradients of temperature, salinity, chlorophyll, PO4 and mixed layer depth. Total coccolith concentrations ranged from 42*10**6/g sediment in coastal areas to more than 19000*10**6/g sediment in oceanic regions. The general distribution does not seem to be dependent on coccolithophore productivity in surface waters alone, but also on the diluting input of terrigenous material. A total of 27 taxa were identified. The main species dominating the assemblages were Gephyrocapsa oceanica, Emiliania huxleyi and Florisphaera profunda with a combined average abundance of more than 70%. Several species and species groups reflect with their distribution the environmental parameters of the overlying water masses and may be successfully used to improve palaeoclimatic reconstructions, e.g. (a) F. profunda exhibits a high similarity or even positive correlation to the mean annual mixed layer depth, (b) calciosolenids can be described as coastal or shelf species. While temperature and salinity gradients do not seem to be crucial for coccolithophores in this region, the mean mixed layer depth as well as the PO4 concentration (representative for total nutrient availability) may control in part the coccolithophore assemblages. According to the results of a cluster analysis and the distribution pattern of all species, it was possible to differentiate three main coccolithophore assemblages. A G. oceanica dominated assemblage mainly occurs in the northern part of the study area and can be described as 'high nutrient assemblage'. The second assemblage, dominated by F. profunda, may be typical for oligotrophic and stable conditions in open ocean waters. A third assemblage, with high amounts of 'coastal species', characterises coastal conditions on the shelves.
description: Supplement to: Andruleit, Harald; Rogalla, U (2002): Coccolithophores in surface sediments of the Arabian Sea in relation to environmental gradients in surface waters. Marine Geology, 186(3-4), 505-526
DOI: 10.5281/zenodo.7513632
title: PASTA-ice sea ice image classification: calibration files and training data

description: PASTA-ice is a Python-based classification algorithm for aerial sea-ice images. The data set contains calibration files for the CANON EOS-1D Mark III cameras that were implemented in helicopters and POLAR aircraft of the Alfred-Wegener-Institute. Furthermore, it contains training data of labeled sea ice surfaces observed during RV Polarstern cruise PS106 that can be used to train the implemented random forest classifier. Files with extension "sediments" were extended with exemplary data of sediment-loaden snow at the MOSAiC expedition. The PASTA-ice algorithm is available under: https://github.com/nielsfuchs/pasta_ice
DOI: 10.6084/m9.figshare.25656384
title: Supplementary Material for: TFAP2A upregulates SKA3 to promote glycolysis and reduce the sensitivity of lung adenocarcinoma cells to cisplatin

description: Introduction: This work was designed to delve into the effects of SKA3 on glycolysis and cisplatin (CDDP) resistance in LUAD cells and to find new possibilities for individualized treatment of LUAD.
Methods: LUAD mRNA expression data from the TCGA database were procured to scrutinize the differential expression patterns of SKA3 in both tumor and normal tissues. GSEA and Pearson correlation analyses were employed to elucidate the impact of SKA3 on signaling pathways within the context of LUAD. In order to discern the upstream regulatory mechanisms, the ChEA and JASPAR databases were utilized to predict the transcription factors and binding sites associated with SKA3. qRT-PCR and Western blot were implemented to assay the mRNA and protein expression levels of SKA3 and TFAP2A. Chromatin immunoprecipitation (ChIP) and dual luciferase assays were performed to solidify the binding relationship between the two. Extracellular acidification rate, glucose consumption, lactate production, and glycolysis-related proteins (HK2, GLUT1, and LDHA) were used to evaluate the level of glycolysis. Cell viability under CDDP treatment was determined utilizing the CCK-8, allowing for the calculation of IC50. The expression levels of SKA3 and TFAP2A proteins were detected by immunohistochemistry (IHC).
Results: SKA3 exhibited upregulation in LUAD tissues and cell lines, establishing a direct linkage with glycolysis pathway. Overexpression of SKA3 fostered glycolysis in LUAD, resulting in reduced sensitivity towards CDDP treatment. The upstream transcription factor of SKA3, TFAP2A, was also upregulated in LUAD and could promote SKA3 transcription. Overexpression of TFAP2A also fostered the glycolysis of LUAD. Rescue assays showed that TFAP2A promoted glycolysis in LUAD cells by activating SKA3, reducing the sensitivity of LUAD cells to CDDP. The IHC analysis revealed a positive correlation between high expression of SKA3 and TFAP2A and CDDP resistance. 
Conclusion: In summary, TFAP2A can transcriptionally activate SKA3, promote glycolysis in LUAD, and protect LUAD cells from CDDP treatment, indicating that targeting the TFAP2A/SKA3 axis may become a plausible and pragmatic therapeutic strategy for the clinical governance of LUAD.
DOI: 10.15468/zr6frj
title: Data from: Rodent trapping studies as an overlooked information source for understanding endemic and novel zoonotic spillover

description: This dataset contains records of the small-mammals, primarily Rodentia, trapped across West Africa and included in published literature that was obtained through a comprehensive review of rodent trapping studies across the region. Data were extracted from studies to produce detection, non-detection histories at described trapping locations. Geolocation were perfored on all included locations. Individual species that were detected elsewhere in the contributing studies records but were not reported from a trapping location were interepreted as non-detections and so explicitly recorded as 0 counts.
DOI: 10.17632/3ytmd9jjyh.1
title: Estudio de la Educación para los ODS y Ciudadanía Digital

description: Matriz de datos de un estudio realizado entre 302 estudiantes de la Facultad de educación en la Universidad de Almería (España) durante el curso 2019-20 donde además de recoger información sociodemográfica se pregunta sobre fuentes de información, frecuencia de acceso a Internet desde diferentes lugares, frecuencia de uso de Internet y sobre distintos propósitos para el uso de Internet. El principal objetivo de estudio era analizar el impacto que tenía una intervención educativa para sensibilizar sobre los ODS con diversas acciones políticas no convencionales online o ciberacciones (por ejemplo clicactivismo, peticiones, online, cibervoluntariado, etc.) sobre la Ciudadanía digital. Se tomó una medida de la ciudadanía digital administrando la escala de Choi, Glassman y Cristol (2017) antes (pretest) y después (postest) de la intervención educativa. Además de aumentar significativamente la puntuación global de la ciudadanía digital, se incrementó significativamente dos de los cinco factores (enfoque crítico y activismo político en internet)
DOI: 10.21338/ess11e01_0
title: ESS11 - integrated file, edition 1.0
DOI: 10.5281/zenodo.10605646
title: BULL Database – Spanish Basin attributes for Unraveling Learning in Large-sample hydrology

description: We present a novel basin dataset for large-sample hydrological studies in Spain. BULLcomprises data for … basins, combining hydrometeorological time series (streamflow and …climatic variables) with … attributes related to geology, soil, topography, land cover,anthropogenic influence and hydroclimatology.
DOI: 10.5285/45174e8c-7ce8-4d87-a6f7-570db476c6c9
title: High resolution vector polylines of the Antarctic coastline - VERSION 7.6

description: Coastline for Antarctica created from various mapping and remote sensing sources, consisting of the following coast types: ice coastline, rock coastline, grounding line, ice shelf and front, ice rumple, and rock against ice shelf. Covering all land and ice shelves south of 60S. Suitable for topographic mapping and analysis. High resolution versions of ADD data are suitable for scales larger than 1:1,000,000. The largest suitable scale is changeable and dependent on the region. Changes in v7.6 include updates to the Amery Ice Shelf front, ice shelves and glaciers east of Law Dome, and sections of coast and ice shelf around Abbot Ice Shelf and Pine Island Glacier. Data compiled, managed and distributed by the Mapping and Geographic Information Centre and the UK Polar Data Centre, British Antarctic Survey on behalf of the Scientific Committee on Antarctic Research.
description: Dataset compiled from a variety of Antarctic map and satellite image sources. The dataset was created using ArcGIS and QGIS GIS software programmes and has been checked for basic topography and geometry checks, but does not contain strict topology. Quality varies across the dataset and certain areas where high resolution source data were available are suitable for large scale maps whereas other areas are only suitable for smaller scales. Each line has attributes detailing the source which can give the user further indications of its suitability for specific uses. Attributes also give information including 'surface' (e.g. grounding line, ice coastline, ice shelf front) and revision date. Compiled from sources ranging in time from 1990s-2022 - individual lines contain exact source dates.
DOI: 10.6084/m9.figshare.25400323
title: Supplementary Material for: Network structure and clustering analysis relating to individual symptoms of problematic internet use in a community adolescent population

description: Introduction: Problematic internet use (PIU) is a psychopathology that includes multiple symptoms and psychological constructs. Because no studies have considered both network structures and clusters among individual symptoms in the context of PIU in a Korean adolescent population, this study aimed to investigate network structures and clustering in relation to PIU symptoms in adolescents. Methods: Overall, 73,238 adolescents were included. PIU severity was assessed using a self-rating scale comprising 20 items and 6 subscales, namely, the Internet Addiction Proneness Scale for Youth–Short Form; KS-scale. Network structures and clusters among symptoms were analyzed using a Gaussian graphical model and exploratory graph analysis, respectively. Centrality of strength, closeness, and betweenness scores were also calculated. Results: Our study identified four clusters: disturbance in adaptive functioning, virtual interpersonal relationships, withdrawal, and tolerance. The symptom of confidence served as a node bridging the cluster of virtual interpersonal relationships and other clusters of withdrawal and disturbances of adaptive function. The symptom of craving served as a bridge between the clusters of withdrawal and tolerance with high betweenness centrality. Conclusion: This study identified network structures and clustering among PIU symptoms in adolescents and revealed that positive experiences derived from online interpersonal relationships were an important mechanism underlying PIU. These are novel insights concerning the interconnection among multiple symptoms and related clustering for the mechanism of adolescent PIU in terms of KS scale PIU assessment.
DOI: 10.6084/m9.figshare.26023327
title: Forest and soil fungal community dynamics are fuelled by root rot pathogen-induced gaps

description: Raw dataset belonging to the contribution "Forest and soil fungal community dynamics are fuelled by root rot pathogen-induced gaps" in Journal of Ecology.
DOI: 10.21947/1899850
title: Site A2 - PNNL Surface Flux Station / Daily Fluxes

description: Preliminary processed turbulent fluxes; compilation of 30-minute estimates for one day
DOI: 10.5439/1890922
title: dlppi2 (b1)

description: The Doppler lidar (DL) is an active remote-sensing instrument that provides range- and time-resolved measurements of the line-of-sight component of air velocity (i.e., radial velocity) and attenuated aerosol backscatter. The DL operates in the near-infrared and is sensitive to backscatter from atmospheric aerosol, which are assumed to be ideal tracers of atmospheric wind fields. The DL works by transmitting short pulses of infrared laser light into the atmosphere. Atmospheric aerosols scatter a small fraction of that light energy back to the transceiver, where it is collected and recorded as a time-resolved signal. From the delay between the outgoing pulse and the backscattered signal, the instrument infers the distance to the scattering volume. Coherent detection is used to measure the Doppler frequency shift of the backscatter signal. This is accomplished by mixing the backscatter signal with a reference laser beam (i.e., local oscillator) of known frequency. The onboard signal processor then determines the Doppler frequency shift from the spectrum of the mixed signal. The Doppler frequency shift and thus the radial air velocity is determined from the peak of the Doppler spectrum. The attenuated backscatter is determined from the energy content of the Doppler spectra. The DL provides accurate measurements of radial velocity in regions of the atmosphere where aerosol concentrations are high enough to ensure good signal-to-noise ratio. Thus, valid data are usually limited to the atmospheric boundary layer where aerosol is ubiquitous. Valid measurements can also be obtained in elevated aerosol layers or in optically thin clouds above the boundary layer. Most of the ARM DLs have full upper-hemispheric scanning capability, enabling 3D mapping of turbulent flows in the atmospheric boundary layer. With the scanner pointed vertically, the DL provides height- and time-resolved measurements of vertical velocity.
DOI: 10.1594/pangaea.927787
title: Aerial images of sea ice surfaces recorded for the project TEMPO joining PS106 campaigns PASCAL and SiPCA north of Svalbard in May/June/July 2017

description: The dataset contains aerial RGB images and supplementary data of scientific helicopter missions during Polarstern cruise PS106/1 - PASCAL and PS106/2 - SiPCA. Measurements were performened within the secondary user project TEMPO. Focus of the helicopter flights was on recording melt pond development in its early phase of the summer season. Images were recorded downwards every 4 seconds with a CANON EOS 1D Mark III DSLR + CANON EF 14mm f/2.8L II USM lens.
DOI: 10.21947/2221789
title: AWAKEN Site A1 - NREL Ceilometer (Vaisala CL51) / Derived Data

description: Site A1 netCDF L3 data files have level 3 (L3) data that have gone through the calculation service and contain all the data from the algorithms, including mixing layer height values and quality index data. L3 default files contain L3 data that use the default preset for a live plot. File naming schema: L3_DEFAULT__YYYYMMDDHHMM_ _.nc Name Description L3 Identification of the data level DEFAULT Identification of the L3 file type CUSTOM OFFLINE STATION_NUMBER WMO station number, if defined YYYYMMDDHHMM UTC time ParameterKey Identification of the advanced algorithm settings. See the table below for an explanation. FREE_FORMAT File suffix, if defined
DOI: 10.5281/zenodo.10572754
title: Extant coccolithophore cell size measurements

description: This is a dataset of extant coccolithophore coccosphere and cell size measurements taken using light microscopy (LM) and measured using the image analysis progam Fiji. Samples come from the Atlantic Meridional Transect (AMT) 18 cruise (2008), cruise D366 around the NW European shelf (2011), and surface water samples taken in the Maldives during International Ocean Discovery Program (IODP) Expedition 359 (2015). Further information on the data collection and content of the dataset can be found in the dataset description word file.

This dataset is currently related to two manuscripts in preparation: 

1.     Rosie M. Sheward, Alex J. Poulton, Jeremy R. Young, Joost de Vries, Fanny M. Monteiro, Jens O. Herrle. “Cellular morphological trait dataset for extant coccolithophores from the Atlantic Ocean” to be submitted to Scientific Data.

2.     Joost de Vries, Rosie M. Sheward, Alex J. Poulton, Jeremy Young, Fanny Monteiro, Roberta Johnson, Kyoko Hagino, Patricia Zivera and Levi Wolf. “Dataset of extant coccolithophore size, carbon content and global distribution” to be submitted to Scientific Data.

 

Correspondence to Jeremy Young,  jeremy.young@ucl.ac.uk
DOI: 10.5281/zenodo.11483788
title: Cellular morphological trait dataset for extant coccolithophores from the Atlantic Ocean

description: The Cellular morphological trait dataset for extant coccolithophores from the Atlantic Ocean is a reference dataset for morphological traits from extant coccolithophores (calcifying marine plankton group), including cell-specific data for coccosphere and cell size, coccolith size, number of coccoliths per cell, and morphometric-based cellular calcite estimates. The dataset also includes ancillary information about the sample and taxonomic identification.

The dataset contains observations from 1074 individual coccolithophore cells representing 61 species from 25 genera. Samples were obtained during the Atlantic Meridional Transect (AMT) 14 cruise that sailed between the Faulkland Islands and the UK in 2004. Measurements were taken from scanning electron microscopy (SEM) images, which are archived on Zenodo at doi: 10.5281/zenodo.10571819. A description of the parameters included in the dataset can be found in the file "2. Descriptor- Cellular morphological trait dataset for extant coccolithophores from the Atlantic Ocean".

Three additional supporting files are included with this dataset:



"3. Coccolith size, coccolith calcite and cellular calcite in collapsed Umbellosphaera coccospheres" contains measurements of coccolith size (CL) and associated coccolith calcite (PIC) for 20 collapsed Umbellosphaera coccospheres. This data was used to derive an adjustment to coccolith length applied to coccolith length measured on intact Umbellosphaera coccosphere measurements to account for the wide variety of coccolith sizes present on individual coccospheres.

"4. Sensitivity of cellular calcite contents to uncertainties in coccolith size, number of coccoliths per cell and shape factors" contains re-calculations of cellular calcite data using uncertainties of ±5-30% on coccolith size (CL) and species-specific shape factor (Ks) and variations of ±2 coccoliths and ±5 coccoliths for the number of coccoliths per cell (CN) for coccospheres of Gephyrocapsa mullerae, Umbilicosphaera hulburtiana, Syracosphaera spp., and Discosphaera tubifera.

"5. Partial coccolith length and coccolith length measurements" contains measurements used to calculate the uncertainty in coccolith length introduced when partial coccolith length is measured.


Extensive description of the methodology related to this dataset can be found in the associated manuscript: Rosie M. Sheward, Alex J. Poulton, Jeremy R. Young, Joost de Vries, Fanny M. Monteiro, Jens O. Herrle. “Cellular morphological trait dataset for extant coccolithophores from the Atlantic Ocean” in review with Scientific Data.

Correspondence should be directed to:

Rosie M. Sheward, sheward@em.uni-frankfurt.de
DOI: 10.15468/5rtmkg
title: Natural History Museum Rotterdam (NL) - Chordata collection

description: Collection Chordata of the Natural History Museum Rotterdam. Amphibians: Mostly specimens from Europe, Asia Minor and the Middle East. Reptiles: Mostly European species, with some material from Asia Minor and the Middle East. Birds: Mounted specimens, study skins, skeletons and eggs, mainly from European species, some Indonesian material; skeletal material of gulls and waders. Cartilaginous Fish: European species, mostly from the North Sea. Bony Fish: Mainly European species, mostly from the North Sea and Western Atlantic. Mammals (fossil) : Representative collection of mostly Pliocene, Miocene and Pleistocene material from the Netherlands and the bottom of the North Sea. Rich in marine mammals. Mammals (recent): Study skins, mounts and skeletal material of Western Palearctic species, and some material from elsewhere (Indonesia).
DOI: 10.15468/alz7wu
title: Field Museum of Natural History (Zoology) Fish Collection

description: Established in 1894, The Field Museum fish collection now contains more than 1,700,000 specimens, 130,000 lots, 10,000 species, 4,500 tissuesamples, 3,500 skeletons, 1,400 nominal types, and 450 families. Specimens range from the lobe-finned Coelacanth and lungfishes, to a diversity of freshwater catfishes and cichlids, to charismatic reef fishes such as the amazing Slingjaw Wrasse and venomous Red Lionfish.
DOI: 10.15468/loyiz6
title: UCBG TAPIR Provider

description: UCBG TAPIR Provider