cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/9kd59ftwng
title: Calculation of the energy response of a spectrometer

description: Title of program: AFER Catalogue Id: ACXA_v1_0 Nature of problem This program computes the convolution integral of an idealized spectrograph (or spectrometer) apparatus function with a Voigt line profile (lorentzian and gaussian shaped line). On this basis one could evaluate the validity to derive the total integrated intensity of an emission (or absorption) line from the peak value of the recorded signal (irradiance for a spectrograph, radiant power for a spectrometer). Versions of this program held in the CPC repository in Mendeley Data ACXA_v1_0; AFER; 10.1016/0010-4655(76)90071-0 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/ttz-xy0-3le
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xjg-sb2-lwm
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26513089.v1
title: GO Analysis.xlsx

description: GO table with biological processes, cellular components and molecular function
DOI: 10.3535/6h4-l34-s82
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rkm-1mk-xcv
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/klc-6jl-9d6
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pm4-rdh-x5k
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3554235.v1
title: Appendix A. Comparison of coexistence in the forest dynamics model under different parameter values.

description: Comparison of coexistence in the forest dynamics model under different parameter values.
DOI: 10.6084/m9.figshare.7091417.v1
title: MOESM3 of Secular and coseismic changes in S-wave velocity detected using ACROSS in the Tokai region

description: Additional file 3. Secular and coseismic change for each station.
DOI: 10.3535/24p-bpe-zxa
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lzv-qgc-hqz
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/x496b5j6ft
title: LINF_090013400

description: CPSF30 | cleavage and polyadenylation specificity factor 30 kDa subunit; Leishmania infantum
DOI: 10.3535/37y-fcp-35w
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qrg-xt8-9b5
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14945151.v1
title: Table 51. Impact of article (Total citation for Qualitative articles)

description: Impact of article (Total citation for Qualitative articles)<b></b>
DOI: 10.17632/6rx2k6xhjg
title: Screening and molecular mechanism research on bile microRNAs associated with chemotherapy efficacy in perihilar cholangiocarcinoma

description: This dataset includes high-throughput sequencing data of bile microRNAs (miRNAs) and mRNAs from patients with advanced perihilar cholangiocarcinoma (pCCA) treated with hepatic arterial infusion chemotherapy (HAIC) using oxaliplatin (OXA) and 5-fluorouracil (5-Fu). The study aimed to identify miRNAs associated with chemotherapy resistance in pCCA patients. Bile samples were collected from patients with varying survival outcomes, and sequencing data were used to identify differentially expressed miRNAs and mRNAs. Key miRNAs, such as miR-532-3p, miR-1250-5p, and miR-4772-5p, were found to correlate with patient survival, and miR-532-3p was shown to promote chemotherapy resistance through negative regulation of SPARC. This dataset may help in further understanding the molecular mechanisms of chemotherapy resistance and identifying potential biomarkers or therapeutic targets for pCCA.
DOI: 10.3535/dvh-v8v-02e
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mbt-6vr-psb
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23826315.v2
title: Table 2 & 3_Formation of large karstic cave systems in carbonate rocks by cooling hydrothermal fluids.pdf

description: <b> </b><b>Formation of large karstic cave systems in carbonate rocks by cooling hydrothermal fluids</b>Supplementary Information<b>: </b>Table S2. Rock mineralogical composition for the silicate and carbonate aquifers.Table S3. Chemical composition of groundwaters from the aquifers (see text and Table S2).
DOI: 10.17632/f4k58sfdbr
title: Original data and Key Resources

description: Original images containing phase-contrast images, H&E/immunofluorescence images, Fish images and Western blot images.
Key Resources containing section of the Key Resources Table and the “Data and Software Availability” section of STAR Methods.
DOI: 10.3535/fdx-zk8-blg
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2en-k94-cfv
title: Conichnus conicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e1r-kdt-fcr
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14386628.v1
title: Human health risk assessment due to metals in cow’s milk from the industrial discharge area: a case study from Ranipet, Tamil Nadu, India

description: Supplementary information for the manuscript
DOI: 10.6084/m9.figshare.21130124.v1
title: Data_ultramafic.csv

description: We observed plant-pollinator interactions in six locations in New Caledonia (see Methods in Zakardjian et al., submitted). NB: this data set combine two sampling methods.
DOI: 10.17632/6p55yyz5hn
title: Data for: A phase I clinical trial of ruxolitinib in combination with nilotinib in chronic myeloid leukemia patients with molecular evidence of disease

description: Protocol: A phase I study of combination with nilotinib and ruxolitinib in CML patients with evidence of molecular disease
DOI: 10.3535/lvn-zpf-d2p
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ynb-vg6-ybj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ccf-nbd-68t
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f8k-sma-ejs
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9f9-5lx-1l1
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v2m-xn9-jx2
title: Conichnus conicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/d2r7kmnwc8
title: Apalachicola-LeafRoot-MangroveSaltMarsh-SOC

description: This data set includes distribution of lignin and lipid biomarkers in A. germinans, R. mangle, S. alterniflora, and J. roemerianus leaf and root samples, as well as soil samples collected from monospecific communities of all aforementioned plant habitats, in the Pilot's Cove region, Little St. George island, Apalachicola estuary. This data set also includes results of mixing models for estimation of %contribution of leaves and roots from each plant species to bulk soil organic carbon. The R code for the mixing model (for estimating %contribution of leaves and roots) and random forest model (for determining the best proxies for classifying plant samples by species and tissue types) was also attached here.
DOI: 10.3535/5t5-drc-2wp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4ms-cm7-wej
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wa5-hmv-l40
title: Skarn

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/vjc8922t3f
title: user4

description: testProject
DOI: 10.17632/zv8s8bj66z
title: Data for: Effect of grinding parameters on microstructure evolution of TC21 titanium alloy with bimodal starting microstructure

description: friction and wear，XRD data
DOI: 10.3535/gbt-e60-6sj
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p6t-mvp-mks
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/za3-3gg-fp9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21512121.v1
title: Datasets_Siyabulela_Sophi_209046864 .pdf

description: Datasets
DOI: 10.17632/mm497kznz2
title: User aggresion toward CAs

description: This dataset contains 413 questionnaires regarding user verbal aggression toward conversational agents. Besides demographic variables, it includes questionnaire items of six constructs: psychological power, desire for power, anticipatory guilt, verbal aggression toward conversational agents, moral idealism, and anthropomorphism.
DOI: 10.17632/v5mncn2ww3
title: Data for: Wastewater treatment plant effluent inputs induce large biogeochemical changes during low flows in an intermittent stream but small changes in day-night patterns

description: This data set includes stream discharge, stream physicochemistry, and in-stream net uptake rates for ammonium, nitrite, nitrate, dissolved inorganic nitrogen and soluble reactive phosphorus. The data set contains data from 8 sampling campaigns which were conducted at two reaches located upstream and downstream of a wastewater treatment plant in la Tordera stream (Catalonia, NE Spain) during the water year 2016-2017. During each sampling date, water measurements and sample collection was repeated during daytime and nighttime. In-stream net nutrient uptake velocity (Vf) was calculated following standard nutrient spiraling procedures. Daily photosynthetically active radiation during the period of study is also provided. More details about data collection and data analysis can be found in the material and methods section of the paper: "Wastewater treatment plant effluent inputs induce large biogeochemical changes during low flows in an intermittent stream but small changes in day-night patterns" by Bernal et al.
DOI: 10.3535/qzj-pqv-ltc
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/688-5sa-l6e
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/85d-9gr-b0j
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1b7-kl9-mld
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mek-fzq-bns
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jd7-ahz-1s0
title: Cassiterite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t0a-hkl-gtp
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3794752_d3.v1
title: Additional file 3: Table S2. of Changes in the neuropeptide content of Biomphalaria ganglia nervous system following Schistosoma infection

description: Proteins on the PPI network and the annotations of relevant proteins of S. mansoni. (XLSX 173Â kb)
DOI: 10.17632/3y496txbc6
title: Microtremor Data

description: Raw Microtremor Data
DOI: 10.3535/3sy-acr-kz2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x4p-dgl-tc0
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21030736.v2
title: Geossítio Cerro Comprido (Ermida São Pio) - Geoparque Quarta Colônia. Arquivo STL para impressão 3D

description: Com aproximadamente 400 metros de altitude, o Geossítio Mirante Cerro Comprido localiza-se a Leste do município de Faxinal do Soturno, Rio Grande do Sul, Brasil. https://www.google.com/maps/dir//-29.580797,-53.399933 <br> No alto do Cerro, há uma pequena igreja, a Ermida São Pio de Pietrelcina, que foi inaugurada em 2004, e a sua construção foi motivada pela devoção a São Pio, do casal Cláudio Casassola e Lourdes Pauletto e como forma de agradecimento pelas graças alcançadas. <br> Geoparque Quarta Colônia Faxinal do Soturno, RS, BRA
DOI: 10.3535/bts-gys-rn9
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zvp-x5x-6yk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9pv-y8j-exl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pjt-xxn-2xy
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/8wp73zxr47
title: Reproducible experiments on Learned Metric Index – proposition of learned indexing for unstructured data 

description: With this collection of code and configuration files (contained in "LMIF" = 'Learned Metric Index Framework'), outputs ("output-files") and datasets ("data") we set out to explore whether a learned approach to building a metric index is a viable alternative to the traditional way of constructing metric indexes. Specifically, we build the index as a series of interconnected machine learning models. This collection serves as the basis for the reproducibility paper accompanying our parent paper -- "Learned metric index—proposition of learned indexing for unstructured data" [1].

1. In "data" we make publicly available a collection of 3 individual dataset descriptors -- CoPhIR (1 million objects, 282 columns), Profimedia  (1 million objects, 4096 columns), and MoCap (~350k objects, 4096 columns), "labels" obtained from a template index -- M-tree or M-index, "queries" used to perform an experimental search with and "ground-truths" to evaluate the approximate k-NN performance of the index. Within "test" we include dummy data to ease the integration of any custom dataset (examples in "LMIF/*.ipynb") that a reader may want to integrate into our solution. In CoPhIR [2], each of the vectors is obtained by concatenating five MPEG-7 global visual descriptors extracted from an image downloaded from Flickr. The Profimedia image dataset [3], contains Caffe visual descriptors extracted from Photo-stock images by a convolutional neural network. MoCap (motion capture data) [4] descriptors contain sequences of 3D skeleton poses extracted from 3+ hrs of recordings capturing actors performing more than 70 different motion scenarios.
The dataset's size is 43 GB upon decompression.

[1] Antol, Matej, et al. "Learned metric index—proposition of learned indexing for unstructured data." Information Systems 100 (2021): 101774.
[2] Batko, Michal, et al. "Building a web-scale image similarity search system." Multimedia Tools and Applications 47.3 (2010): 599-629.
[3] Budikova, Petra et al. "Evaluation platform for content-based image retrieval systems." International Conference on Theory and Practice of Digital Libraries. Springer, Berlin, Heidelberg, 2011.
[4] Müller, Meinard, et al. "Documentation mocap database hdm05." (2007).

2. "LMIF" contains a user-friendly environment to reproduce the experiments in [1]. LMIF consists of three components:
- an implementation of the Learned Metric Index (distributed under the MIT license),
- a collection of scripts and configuration setups necessary for re-running the experiments in [1] and
- instructions for creating the reproducibility environment (Docker).
For a thorough description of "LMIF", please refer to our reproducibility paper -- "Reproducible experiments on Learned Metric Index – proposition of learned indexing for unstructured data".

3. "output-files" contain the reproduced outputs for each experiment, with generated figures and a concise ".html" report (as presented in [1])
DOI: 10.3535/g2x-1k0-zml
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jvj-lpm-1m8
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/03c-0gb-0l6
title: Plagioclase

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25952491.v1
title: C0ModelRoslerA52 - source signals + refined ones

description: The zip file consists of groups/clusters of signals (refined signals) that are time-separated subsequences obtained from of the source signals. Refined signals have very similar initial values (in terms of value, and the first derivative, and the second one).<br><br>Usage of refined signals allows for examining the influence of insignificant differences in the initial conditions on the signal trajectory, which contributes to the potential detection of chaotic properties of the tested system.<br>The method is described here: https://draugustyn.gitlab.io/refined-signals-4-chaos-detection<br><br><br><br>The zip file contains either source signals (C0ModelRoslerA52-<b><i>m</i></b>.txt, where <b><i>m</i></b> = 1..10) or refined ones (C0ModelRoslerA52-<b><i>m</i></b>-<b><i>c</i></b>-<b><i>i</i></b>.txt, where <b><i>c</i></b> - a cluster identifier, <b><i>i</i></b> = 1..3 or 1..2 - index of a signal in a cluster).<br>Source signals come from the figshare project “Datasets for learning of unknown characteristics of dynamical systems”.The source signal for Rossler attractor (denoted by CHA_3) is described here: https://draugustyn.gitlab.io/signal-data/
DOI: 10.3535/dae-avf-whe
title: Anthraconite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j2f-848-6tr
title: igneous- and metamorphic rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14773146.v1
title: O'Brien et al Supplemental Table S6

description: <b>Supplemental Table S6. </b> Inferential statistics and effect size for Fig. 5. Results from two-way, repeated measures ANOVA (Figs. 5<i>A</i> – <i>C</i>) are reported for effects of treatment (saline, fentanyl, morphine, and buprenorphine), time (24 h of recording), and treatment by time interaction (n = 6 mice). Results from one-way, repeated measures ANOVA (Fig. 5<i>D</i> and <i>E</i>) are reported for treatment effects on latency to onset of NREM sleep and REM sleep (n = 6 mice).
DOI: 10.6084/m9.figshare.26325429.v2
title: A new genus of metriorhynchid crocodylomorph from the Lower Cretaceous of Germany

description: Here we describe a new genus and species of metriorhynchid crocodylomorph, <i>Enalioetes schroederi</i> gen. et sp. nov., from the lower Valanginian Stadthagen Formation (Lower Cretaceous) of north-western Germany. <i>Enalioetes schroederi</i> is the most complete and well-preserved Cretaceous metriorhynchid skull known to date, preserving most of the cranium and mandible, the atlas-axis complex and the first postaxial cervical vertebra. The specimen was previously attributed to the coeval enigmatic metriorhynchid <i>Enaliosuchus</i> (a <i>nomen dubium</i>) and, more recently, to <i>Cricosaurus</i>. Although the specific epithet <i>schroederi</i> has been used frequently in the literature, it has never been formally established. Herein, we demonstrate that the new taxon is distinct from all known metriorhynchids by a unique combination of characters including several autapomorphies such as: the lack of bulbous dorsolateral expansion in the posterior nasal cavity; mediolateral distance between the orbital canals being approximately 1.5 times the diameter of the orbital canals; lacrimal with dorsoventrally deep anterior process ventral to the preorbital fossa being equal to or greater than the depth of the jugal anterior process and the anterodorsal process of the lacrimal; and ascending processes at atlas intercentrum extending far dorsally to level of neural canal. <i>Enalioetes schroederi</i> contributes to the sparse global record of Cretaceous metriorhynchids and represents one of the stratigraphically youngest occurrences of the group. It can thus help to enhance our understanding of the metriorhynchid diversity during the Cretaceous Period. http://zoobank.org/urn:lsid:zoobank.org:pub:5139021C-8E09-4912-BF22-9DDF14A4C895
DOI: 10.3535/hs9-t1s-v7a
title: Granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kl3-frh-wxl
title: Rhyolite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/jhzxxntrrx
title: High frequency of drug-resistant mutation to nucleos(t)de analogues in hepatitis B virus (HBV) infected people living with HIV, in the Northeast region of Colombia.

description: The present poster summarizing significant findings related to Hepatitis B virus (HBV) antiviral resistance-associated mutations (RAMs) in individuals coinfected with human immunodeficiency virus (HIV) who were undergoing highly active antiretroviral therapy (HAART). The study aimed to investigate the prevalence of HBV coinfection, HBV genotypes, and the presence of RAMs in a cohort of people living with HIV (PLWH) in the northeastern region of Colombia. Between February 2013 and February 2014, a cross-sectional study was conducted, collecting virological, immunological, and HAART data from clinical records. In-house nested PCR and Sanger sequencing were used to identify coinfections, genotypes, RAMs, and HBV surface antigen (HBsAg) escape mutants. Key findings include the confirmation of HBV coinfection in 11.6% of the 275 PLWH, with a breakdown of 28.2% having active hepatitis B (HBsAg positive) and 71.8% having occult hepatitis B infections (OBI). All HBV sequences (n = 23) belonged to genotype F3. Notably, most patients coinfected with HIV/HBV had CD4+ T cell counts above 200 cells/mm³, and 37.5% had undetectable HIV viral loads. RAMs associated with resistance to lamivudine/telbivudine and partial resistance to entecavir were present in all HBV isolates. Additionally, an unidentified rt236Y mutation related to tenofovir resistance was identified. ADAPVEMs in the S gene were observed in all isolates, although no vaccine escape mutants were detected. In conclusion, the study underscores the significance of HBV molecular screening, resistance monitoring, and the development of new guidelines for PLWH to address RAMs and mitigate HBV-related liver diseases.