cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24498481.v1
title: Multi-omics analysis of green lineage osmotic stress pathways unveils crucial roles of different cellular compartments

description: Maintenance of water homeostasis is a fundamental cellular process required by all living organisms. Here, we use the single-celled green alga Chlamydomonas reinhardtii to establish a foundational understanding of osmotic-stress signaling pathways through transcriptomics, phosphoproteomics, and functional genomics approaches. Comparison of pathways identified through these analyses with yeast and Arabidopsis allowed us to infer their evolutionary conservation and divergence across these lineages. 76 genes, acting across diverse cellular compartments, were found to be important for osmotic-stress tolerance in Chlamydomonas through their functions in cytoskeletal organization, potassium transport, vesicle trafficking, mitogen-activated protein kinase and chloroplast signaling. We show that homologs for five of these genes have conserved functions in stress tolerance in Arabidopsis and reveal a novel PROFILIN-dependent stage of acclimation affecting the actin cytoskeleton that ensures tissue integrity upon osmotic stress. This study highlights the conservation of the stress response in algae and land plants and establishes Chlamydomonas as a unicellular plant model system to dissect the osmotic stress signaling pathway.
DOI: 10.6084/m9.figshare.26023324
title: OmicVerse: A Framework for Bridging and Deepening Insights Across Bulk and Single-Cell Sequencing

description: Processed data used in the omicverse paper.
See here for figure reproducing notebooks:

https://github.com/Starlitnightly/omicverse-reproducibility
DOI: 10.6084/m9.figshare.26023324.v1
title: OmicVerse: A Framework for Bridging and Deepening Insights Across Bulk and Single-Cell Sequencing

description: Processed data used in the omicverse paper.
See here for figure reproducing notebooks:

https://github.com/Starlitnightly/omicverse-reproducibility
DOI: 10.6084/m9.figshare.25540171
title: Hippocampal connectivity patterns echo macroscale cortical evolution in the primate brain

description: Supplemental Data for the manuscript Eichert et al. Nature Communications (2024). Related to Figure 1 in the main manuscript. Screenshots of Nissl-stained hippocampal histology slices from BigMac with manual hippocampal subfield labels. The y-coordinate indicates the approximate distance from the back of the brain. High-resolution histology slices and digital annotation files are provided via the Oxford Digital Brain Bank (Dataset title: Hipmac project). For access to other data related to the manuscript, please refer to the Data Availability section. For further questions, please contact nicole.eichert@ndcn.ox.ac.uk.
DOI: 10.6084/m9.figshare.25540171.v1
title: Hippocampal connectivity patterns echo macroscale cortical evolution in the primate brain

description: Supplemental Data for the manuscript Eichert et al. Nature Communications (2024). Related to Figure 1 in the main manuscript. Screenshots of Nissl-stained hippocampal histology slices from BigMac with manual hippocampal subfield labels. The y-coordinate indicates the approximate distance from the back of the brain. High-resolution histology slices and digital annotation files are provided via the Oxford Digital Brain Bank (Dataset title: Hipmac project). For access to other data related to the manuscript, please refer to the Data Availability section. For further questions, please contact nicole.eichert@ndcn.ox.ac.uk.
DOI: 10.6084/m9.figshare.25942477
title: Molecularly Specific Detection towards Trace Nitrogen Dioxide by Utilizing Schottky-Junction-based Gas Sensor

description: Source data for this paper
DOI: 10.6084/m9.figshare.25942477.v1
title: Molecularly Specific Detection towards Trace Nitrogen Dioxide by Utilizing Schottky-Junction-based Gas Sensor

description: Source data for this paper
DOI: 10.15468/dl.hu8g7q
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypoatherina valenciennei (Bleeker, 1854)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 115 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027638-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sx5pa9
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atherina bleekeri Günther, 1861",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027639-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3wsf2
title: Occurrence Download

description: A dataset containing 314 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saurida elongata (Temminck & Schlegel, 1846)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 314 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027640-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bqruqk
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Squalus japonicus Ishikawa, 1908",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 64 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027641-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h7e94q
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myoxocephalus polyacanthocephalus (Pallas, 1814)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 34 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027642-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hs5kff
title: Occurrence Download

description: A dataset containing 237 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argis toyamaensis (Yokoya, 1933)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 237 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027643-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pd9u29
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Cinnamomum micranthum (Hayata) Hayata"
 ]
}

 The dataset includes 116 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027645-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frpdg7
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Cinnamomum micranthum (Hayata) Hayata"
 ]
}

 The dataset includes 116 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027647-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bnzdy3
title: Occurrence Download

description: A dataset containing 183 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haliotis diversicolor Reeve, 1846",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 183 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027646-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26317126.v1
title: Dataset for study on diabetes distress conducted in Delhi

description: This is the dataset generated from a cross sectional study conducted in Dakshinpuri, Delhi to determine the prevalence of distress among people living with diabetes mellitus, as well as the factors associated with distress and association of distress with self care, glycemic control and health related quality of life (using CDC healthy days measure). Ethical approval was received from the institutional ethics committee and written informed consent was taken from the participants.
DOI: 10.25625/payhsz
title: Authior guidelines test

description: Authior guidelines test
DOI: 10.25625/payhsz/ywfmh1
title: Science of the total environmernt author guidelines.pdf

description: :unav
DOI: 10.15468/dl.a52wh5
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eumetopias jubatus (Schreber, 1776)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 98 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027648-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26317126.v2
title: Dataset for study on diabetes distress conducted in Delhi

description: This is the dataset generated from a cross sectional study conducted in Dakshinpuri, Delhi to determine the prevalence of distress among people living with diabetes mellitus, as well as the factors associated with distress and association of distress with self care, glycemic control and health related quality of life (using CDC healthy days measure). Ethical approval was received from the institutional ethics committee and written informed consent was taken from the participants.
DOI: 10.15468/dl.anzsq2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phoca jubata Schreber, 1776",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027649-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26316985
title: Blood marker data.XLSX

description: This study is mainly to explore the changes of early blood markers of cognitive impairment, and provide help for early screening of early Alzheimer's disease
DOI: 10.6084/m9.figshare.26317126
title: Dataset for study on diabetes distress conducted in Delhi

description: This is the dataset generated from a cross sectional study conducted in Dakshinpuri, Delhi to determine the prevalence of distress among people living with diabetes mellitus, as well as the factors associated with distress and association of distress with self care, glycemic control and health related quality of life (using CDC healthy days measure). Ethical approval was received from the institutional ethics committee and written informed consent was taken from the participants.
DOI: 10.6084/m9.figshare.26317126.v3
title: Dataset for study on diabetes distress conducted in Delhi

description: This is the dataset generated from a cross sectional study conducted in Dakshinpuri, Delhi to determine the prevalence of distress among people living with diabetes mellitus, as well as the factors associated with distress and association of distress with self care, glycemic control and health related quality of life (using CDC healthy days measure). Ethical approval was received from the institutional ethics committee and written informed consent was taken from the participants.
DOI: 10.15468/dl.35rw35
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pandalus hypsinotus Brandt, 1851",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 121 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027650-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bj6s9u
title: Occurrence Download

description: A dataset containing 1121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-13.47588 41.60677,-7.08857 41.60677,-7.08857 44.36297,-13.47588 44.36297,-13.47588 41.60677))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia dealbata Link",
 "Year 2000-2024"
 ]
}

 The dataset includes 1121 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027651-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10784714
title: Incorrect upload

description: The input parameters for the WHAMP.



PlasmaModel is a structure:

PlasmaModel.B - magnetic field in nT

PlasmaModel.Species - cell array of Species

 

Species is a structure:

Species.m - mass/mass_proton (0 means electron)

Species.n - density in cm^-3

Species.t - temperature in eV

Species.a - anisotropy, Tperp/Tpar
DOI: 10.5281/zenodo.10784715
title: Incorrect upload

description: The input parameters for the WHAMP.



PlasmaModel is a structure:

PlasmaModel.B - magnetic field in nT

PlasmaModel.Species - cell array of Species

 

Species is a structure:

Species.m - mass/mass_proton (0 means electron)

Species.n - density in cm^-3

Species.t - temperature in eV

Species.a - anisotropy, Tperp/Tpar
DOI: 10.5281/zenodo.11076656
title: Incorrect upload

description: 1. whamp_input_ionfit_*.mat

The fitting parameters for the growth rate calculation of HFEMIC waves, which includes: 



Bi-Maxwellian distribution parameters:

PlasmaModel.B - magnetic field in nT

PlasmaModel.Species.m - mass/mass_proton (0 means electron)

PlasmaModel.Species.n - density in cm^-3

PlasmaModel.Species.t - temperature in eV

PlasmaModel.Species.a - anisotropy, Tperp/Tpara

 


2. shell_dist_*.mat

The fitting parameters for the growth rate calculation of MS waves, which includes:

Bi-Maxwellian distribution parameters:

PlasmaModel.B - magnetic field in nT

PlasmaModel.Species.m - mass/mass_proton (0 means electron)

PlasmaModel.Species.n - density in cm^-3

PlasmaModel.Species.t - temperature in eV

PlasmaModel.Species.a - anisotropy, Tperp/Tpara

 

Partial shell distribution parameters:



PlasmaModel.Shell.m - mass/mass_proton (0 means electron)

PlasmaModel.Shell.ns - density in cm^-3

PlasmaModel.Shell.sigma - the degree of pitch angle anisotropy

PlasmaModel.Shell.Vs - the shell speed in m/s

PlasmaModel.Shell.theta_s - the thermal spread of the shell in m/s
DOI: 10.5281/zenodo.11076657
title: Incorrect upload

description: 1. whamp_input_ionfit_*.mat

The fitting parameters for the growth rate calculation of HFEMIC waves, which includes: 



Bi-Maxwellian distribution parameters:

PlasmaModel.B - magnetic field in nT

PlasmaModel.Species.m - mass/mass_proton (0 means electron)

PlasmaModel.Species.n - density in cm^-3

PlasmaModel.Species.t - temperature in eV

PlasmaModel.Species.a - anisotropy, Tperp/Tpara

 


2. shell_dist_*.mat

The fitting parameters for the growth rate calculation of MS waves, which includes:

Bi-Maxwellian distribution parameters:

PlasmaModel.B - magnetic field in nT

PlasmaModel.Species.m - mass/mass_proton (0 means electron)

PlasmaModel.Species.n - density in cm^-3

PlasmaModel.Species.t - temperature in eV

PlasmaModel.Species.a - anisotropy, Tperp/Tpara

 

Partial shell distribution parameters:



PlasmaModel.Shell.m - mass/mass_proton (0 means electron)

PlasmaModel.Shell.ns - density in cm^-3

PlasmaModel.Shell.sigma - the degree of pitch angle anisotropy

PlasmaModel.Shell.Vs - the shell speed in m/s

PlasmaModel.Shell.theta_s - the thermal spread of the shell in m/s
DOI: 10.15468/dl.jz8gam
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Takifugu rubripes (Temminck & Schlegel, 1850)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 42 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027652-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48579/pro/hdwuk8/esuo4o
title: Samples_data_Trichomic.csv

description: :unav
DOI: 10.48579/pro/hdwuk8/pnuzng
title: SeqData_rbcL.csv

description: :unav
DOI: 10.48579/pro/hdwuk8/rcp1re
title: SeqData_ITS.csv

description: :unav
DOI: 10.48579/pro/hdwuk8
title: Microbial community in stream microscale landscape

description: Microbial community data obtained using 16S, rbcL and ITS metabarcoding. Sample collected in a single headwater stream. Samples are cases produced by six different Trichoptera cases, gravel, sand, leaf litter and twigs. Structural measurements made on Trichoptera cases (roughness, juxtaposition index, surface of the case) is also reported.
DOI: 10.48579/pro/hdwuk8/1vftp8
title: Readme.csv

description: :unav
DOI: 10.48579/pro/hdwuk8/csnnnt
title: TaxTable_ITS.tab

description: :unav
DOI: 10.48579/pro/hdwuk8/jququc
title: TaxTable_rbcL.tab

description: :unav
DOI: 10.48579/pro/hdwuk8/ljwda7
title: TaxTable_16S.tab

description: :unav
DOI: 10.48579/pro/hdwuk8/qmfglw
title: SeqData_16S.csv

description: :unav
DOI: 10.48579/pro/hdwuk8/xez2b8
title: Trichomic_final.R

description: :unav
DOI: 10.15468/dl.7gwa7v
title: Occurrence Download

description: A dataset containing 174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fulvia mutica (Reeve, 1844)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 174 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027653-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6nxpaj
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cardium muticum Reeve, 1844",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027654-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j7jwp5
title: Occurrence Download

description: A dataset containing 379 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "Country is one of (Chinese Taipei, China, Hong Kong, Macao)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Psacothea hilaris (Pascoe, 1857)"
 ]
}

 The dataset includes 379 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027655-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12754797
title: Tensile strength of Ganoderma pure mycelium - raw data

description: The dataset consists of tensile strength values of pure mycelium of Ganoderma lingzhi and Ganoderma sessile produced using liquid state fermentation. The substrate for liquid state fermentation was supplemented with 0,5% of lignin and 2% of lignin (reference was 0% lignin). Raw data from universal testing machine are also provided. Another variant is a modification of obtained mycelium leather with glycerol treatment (immersion of samples in 20% glycerol solution for 24 hours).
DOI: 10.15468/dl.hvgsmf
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Balaenoptera physalus (Linnaeus, 1758)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027656-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6achc6
title: Occurrence Download

description: A dataset containing 413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((65.51786 21.61522,157.48214 21.61522,157.48214 58.38478,65.51786 58.38478,65.51786 21.61522))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aconitum tanguticum (Maxim.) Stapf"
 ]
}

 The dataset includes 413 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027657-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/3tqz-y166
title: Gl 486b Eclipses

description: MIRI/LRS eclipses of the terrestrial exoplanet Gl 486b, observed in Cycle 1. DOI created for Weiner Mansfield et al. (2024).
DOI: 10.15468/dl.j4f4uv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Balaena physalus Linnaeus, 1758",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027658-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.11395750
title: Replication package for: Economic Integration and the Transmission of Democracy

description: The package contains replication files for results of "Economic Integration and the Transmission of Democracy" by Marco Tabellini and Gicomo Magistretti to be published in the Review of Economic Studies. The README file also discusses how to obtain access to raw data and use the replication files.
DOI: 10.5281/zenodo.11395751
title: Replication package for: Economic Integration and the Transmission of Democracy

description: The package contains replication files for results of "Economic Integration and the Transmission of Democracy" by Marco Tabellini and Gicomo Magistretti to be published in the Review of Economic Studies. The README file also discusses how to obtain access to raw data and use the replication files.