DOI: 10.22002/1vzt3-xvf91
title: Mycoplasma genitalium

description: Dual axis tomogram. Andrew Jewett added this entry to the database in 2017. As such, most details are unknown, and the dosage, tilt, and magnification parameters might be wrong.
description: <strong>Tilt Series Date:</strong> 2004-09-16</p>
<strong>Data Taken By:</strong> Gregory Henderson</p>
<strong>Species / Specimen:</strong> Mycoplasma genitalium</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 64.0°), step: °, constant angular increment, dosage: 100.0 eV/Å²,  defocus: 0.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech T12</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/rawdata/</p>100e_10df_1ax_01.mrc,  Tilt Series (Pixel Size 0.3975 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/rawdata/100e_10df_1ax_01.mrc"
        > <i class="download icon"></i> Download </a></p>

        MG_orig.st,  Tilt Series (Pixel Size 0.3975 nm) This file was located in same directory with "MG_bin2.rec" and "MG_bin3.rec", 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/rawdata/MG_orig.st"
        > <i class="download icon"></i> Download </a></p>

        MG.st,  Tilt Series (Pixel Size 0.3975 nm) This file was located in same directory with "MG_bin2.rec" and "MG_bin3.rec", 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/rawdata/MG.st"
        > <i class="download icon"></i> Download </a></p>

        MG_bin2.rec,  Reconstruction (Pixel Size 0.7949 nm), 73.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/3dimage_91034/MG_bin2.rec"
        > <i class="download icon"></i> Download </a></p>

        denoise_0010.rec,  Reconstruction (Pixel Size 0.7949 nm) A denoised (blurred) version of MG_bin2.rec, 73.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/3dimage_91035/denoise_0010.rec"
        > <i class="download icon"></i> Download </a></p>

        denoise_0020.rec,  Reconstruction (Pixel Size 0.7949 nm) A denoised (blurred) version of MG_bin2.rec, 73.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/3dimage_91036/denoise_0020.rec"
        > <i class="download icon"></i> Download </a></p>

        denoise_0030.rec,  Reconstruction (Pixel Size 0.7949 nm) A denoised (blurred) version of MG_bin2.rec, 73.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/3dimage_91037/denoise_0030.rec"
        > <i class="download icon"></i> Download </a></p>

        denoise_0040.rec,  Reconstruction (Pixel Size 0.7949 nm) A denoised (blurred) version of MG_bin2.rec, 73.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/3dimage_91038/denoise_0040.rec"
        > <i class="download icon"></i> Download </a></p>

        MG.rawtlt,  a list of tilt angles (original file name "MG.rawtlt"), 1.1 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/file_19106/MG.rawtlt"
        > <i class="download icon"></i> Download </a></p>

        MG.fid,  This file was located in same directory with "MG_bin2.rec" and "MG_bin3.rec", 13.6 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/file_19108/MG.fid"
        > <i class="download icon"></i> Download </a></p>

        MG_fid.tlt,  This file was located in same directory with "MG_bin2.rec" and "MG_bin3.rec", 1.0 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/file_19109/MG_fid.tlt"
        > <i class="download icon"></i> Download </a></p>

        MG.tlt,  This file was located in same directory with "MG_bin2.rec" and "MG_bin3.rec", 1.0 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/file_19110/MG.tlt"
        > <i class="download icon"></i> Download </a></p>

        09_16_04_MG__100e_34k_good__09_16_04_MG_100e__MG.png,  217.2 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2004-09-16-2/file_19111/09_16_04_MG__100e_34k_good__09_16_04_MG_100e__MG.png"
        > <i class="download icon"></i> Download </a></p>

        ghp2004-09-16-2_slicer19126.png,  REZ .  -andrew, 343.7 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/ghp2004-09-16-2_slicer19126.png"
        > <i class="download icon"></i> Download </a></p>

        ghp2004-09-16-2_slicer19127.png,  REZ  (perhaps this is a better view) .  -andrew, 347.9 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/ghp2004-09-16-2_slicer19127.png"
        > <i class="download icon"></i> Download </a></p>