cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.9ustzm
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melica penicillaris Boiss. & Balansa"
 ]
}

 The dataset includes 34 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052609-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hq647r
title: Occurrence Download

description: A dataset containing 388109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-02-01",
 "EventDate is less than or equal to 2024-03-02",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 388109 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052564-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qdbxws
title: Occurrence Download

description: A dataset containing 214 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mesembryanthemum tetragonum Thunb."
 ]
}

 The dataset includes 214 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052610-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9za2vqx
title: Geochemical sediment source and target analysis in White Clay Creek, Pennsylvania (ver. 2.0, March 2024)

description: This data release includes one comma delimited table that represents a summary of source and target samples collected for White Clay Creek between 2020 and 2023, in support of sediment fingerprinting modelling. This table contains sediment sample information and results of particle size, elemental composition, and fallout radionuclide analyses. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government.

First posted - October 18, 2023 (available from author).
Revised - March 28, 2024 (version 2.0).
This data release has been revised to include data from samples collected in 2023 that were not published in version 1.0.
DOI: 10.15468/dl.m9kysh
title: Occurrence Download

description: A dataset containing 702 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vicugna pacos (Linnaeus, 1758)"
 ]
}

 The dataset includes 702 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052612-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xr33qj
title: Occurrence Download

description: A dataset containing 1171 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melica persica Kunth"
 ]
}

 The dataset includes 1171 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052611-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7a6g9t
title: Occurrence Download

description: A dataset listing the 3 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leptinotarsa decemlineata (Say, 1824)"
 ]
}

 The dataset's 3 records were derived from 326 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052600-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s9bzyu
title: Occurrence Download

description: A dataset containing 30681 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-03-03",
 "EventDate is less than or equal to 2024-04-02",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 30681 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052613-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4b6ae5
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mesembryanthemum tomentosum Klak"
 ]
}

 The dataset includes 53 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052614-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bdbe82
title: Occurrence Download

description: A dataset containing 2058 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melica picta K.Koch"
 ]
}

 The dataset includes 2058 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052615-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/7970467
title: BART Ridership
DOI: 10.5281/zenodo.10892929
title: STYLISTIC AND SEMANTIC FEATURES OF ENGLISH TAX TERMS
DOI: 10.5281/zenodo.10892930
title: STYLISTIC AND SEMANTIC FEATURES OF ENGLISH TAX TERMS
DOI: 10.15468/dl.5exytb
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mesembryanthemum tortuosum L."
 ]
}

 The dataset includes 170 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052617-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5bps6c
title: Occurrence Download

description: A dataset containing 142454 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Malva moschata L."
 ]
}

 The dataset includes 142454 records from 1620 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052604-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.4605527
title: Meta-omics-aided isolation of elusive anaerobic arsenic-methylating soil bacteria

description: Data pertaining to the manuscript "<strong>Meta-omics-aided isolation of an elusive anaerobic arsenic-methylating soil bacterium"</strong> by Karen Viacava, Jiangtao, Qiao, Andrew Janowczyk, Suresh Poudel, Nicolas Jacquemin, Karin Lederballe Meibom, Him K. Shrestha, Matthew C. Reid, Robert L. Hettich and Rizlan Bernier-Latmani published in ISME journal.
DOI: 10.5281/zenodo.4605526
title: Meta-omics-aided isolation of elusive anaerobic arsenic-methylating soil bacteria

description: Data pertaining to the manuscript "<strong>Meta-omics-aided isolation of an elusive anaerobic arsenic-methylating soil bacterium"</strong> by Karen Viacava, Jiangtao, Qiao, Andrew Janowczyk, Suresh Poudel, Nicolas Jacquemin, Karin Lederballe Meibom, Him K. Shrestha, Matthew C. Reid, Robert L. Hettich and Rizlan Bernier-Latmani published in ISME journal.
DOI: 10.5281/zenodo.6360084
title: MIntO: a Modular and Scalable Pipeline for Microbiome Metagenomic and Metatranscriptomic Meta-omics Data Integration

description: To illustrate the use of MIntO, a set of 91 human fecal metagenomes from the Inflammatory Bowel Disease Multi’omics Database was selected (IBDMDB). We selected six participants diagnosed as non-IBD (P6018 (nIBD1), M2072 (nIBD2)); Crohn’s disease (H4006 (CD1) and H4020 (CD2)); and ulcerative colitis (H4019 (UC1) and H4035 (UC2)) that were followed for one year each. Here, we present the results from the <em>genome-based assembly-dependent</em> mode, where we used 91 metagenomic high-quality reads<strong> </strong>to recover 163 high-quality MAGs, which constituted a set of non-redundant genomes.
DOI: 10.5281/zenodo.6360083
title: MIntO: a Modular and Scalable Pipeline for Microbiome Metagenomic and Metatranscriptomic Meta-omics Data Integration

description: To illustrate the use of MIntO, a set of 91 human fecal metagenomes from the Inflammatory Bowel Disease Multi’omics Database was selected (IBDMDB). We selected six participants diagnosed as non-IBD (P6018 (nIBD1), M2072 (nIBD2)); Crohn’s disease (H4006 (CD1) and H4020 (CD2)); and ulcerative colitis (H4019 (UC1) and H4035 (UC2)) that were followed for one year each. Here, we present the results from the <em>genome-based assembly-dependent</em> mode, where we used 91 metagenomic high-quality reads<strong> </strong>to recover 163 high-quality MAGs, which constituted a set of non-redundant genomes.
DOI: 10.5517/ccdc.csd.cc2bh7ps
title: CCDC 2159605: Experimental Crystal Structure Determination

description: Related Article: Shuai Zhou, Xiaojuan Xu, Xu Zhu, Yu Zheng, Sufang Chen, Mingqiang Xue|2022|Org.Biomol.Chem.|20|4289|doi:10.1039/D2OB00640E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byxx4
title: CCDC 2173717: Experimental Crystal Structure Determination

description: Related Article: R.-M. Liao, Z. An, H.-Y. Ye|2022|Acta Crystallogr.,Sect.C:Cryst.Struct.Chem.|78|366|doi:10.1107/S2053229622005320
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bz3t8
title: CCDC 2173900: Experimental Crystal Structure Determination

description: Related Article: F.N. Naghiyev, V.N. Khrustalev, E.A. Fortalnova, M. Akkurt, A.N. Khalilov, A. Bhattarai, İ.G. Mamedov|2022|Acta Crystallogr.,Sect.E:Cryst.Commun.|78|665|doi:10.1107/S2056989022005370
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.19535248.v2
title: Palladium Catalyzed Synthesis of Novel Pyrido[3,4-d]pyridazin-1(2H)-one Analogues: Cytotoxic, Antidiabetic Potential and Molecular Docking

description: New derivatives of pyrido[3,4-<i>d</i>]pyridazin-1(2<i>H</i>)-one by palladium catalyzed
DOI: 10.6084/m9.figshare.19958675
title: Supplementary Material for: The Effect of Transurethral Resection of the Prostate on Erectile and Ejaculatory Functions in Patients with Benign Prostatic Hyperplasia

description: <b><i>Introduction:</i></b> The aim of this study was to investigate the effect of TURP on erectile function (EF) and ejaculatory function (EJF). <b><i>Methods:</i></b> A total of 91 patients who underwent TURP were retrospectively assessed. Patients were divided into two groups based on International Index of Erectile Function (IIEF-5): group A included 41 patients with normal EF, and group B included 50 patients with erectile dysfunction (ED). All patients were evaluated for EF and EJF at baseline, 1, 3, and 6 months after TURP by using IIEF-5, Ejaculatory Domain-Male Sexual-Health Inventory (Ej-MSHQ). <b><i>Results:</i></b> In group A, there were no significant statistical differences in mean IIEF-5 at baseline and after TURP 22.88 ± 0.81 versus 22.63 ± 2.63 (<i>p</i> = 0.065). However, in group B, there was significant improvement in IIEF-5 after TURP all over the follow-up time points in comparison to the baseline (<i>p</i> = &lt;0.001). The loss of EJF was significant among patients in group A. There was significant improvement of IPSS and Qmax in group A after surgery compared to group B. <b><i>Conclusion:</i></b> The results confirmed that TURP has no significant negative influence on EF, and patients with preexisting ED were improved after TURP. On the contrary, the loss of EJF was significant.
DOI: 10.6084/m9.figshare.19535248.v3
title: Palladium Catalyzed Synthesis of Novel Pyrido[3,4-d]pyridazin-1(2H)-one Analogues: Cytotoxic, Antidiabetic Potential and Molecular Docking

description: New derivatives of pyrido[3,4-<i>d</i>]pyridazin-1(2<i>H</i>)-one by palladium catalyzed
DOI: 10.6084/m9.figshare.19313951
title: Water Promoted One Pot Synthesis of Sesamol Derivatives as Potent Antioxidants: DFT, Molecular Docking, SAR and Single Crystal Studies

description: This dataset associate with this article for references
DOI: 10.6084/m9.figshare.19958711
title: Supplementary Material for: Quality of Life, Efficacy, and Safety of Sequential Intravesical Gemcitabine + Docetaxel versus BCG for Non-Muscle Invasive Urinary Bladder Cancer: A Pilot Study

description: <b><i>Purpose:</i></b> Bacille Calmette-Guerin (BCG) is considered the most effective agent for non-muscle invasive bladder cancer (NMIBC). However, due to BCG-related toxicity, multiple studies have suggested the role of newer chemotherapeutic drugs. The aim of our study was to evaluate intravesical gemcitabine + docetaxel (Gem/Doce) versus BCG with respect to quality of life (QOL), safety, and efficacy in NMIBC. <b><i>Methods:</i></b> A total of 60 patients with NMIBC were evaluated between July 2019 and December 2020 in a prospective manner. The sample size calculation was done, keeping in mind the incidence of intravesical BCG-related complications of up to 50–60% and 20–30% for Gem/Doce combination. The <i>p</i> value of 0.05 was kept as statistically significant. The enrollment ratio was kept at 1, and power of study was aimed at 80%. The study population was alternatively assigned to two groups (BCG vs. Gem/Doce) of 30 patients each. Both the groups received 6 weekly doses of induction therapy followed by 6 monthly doses of maintenance therapy if no recurrence was noted at interim follow-up. QOL scores, safety, and efficacy were assessed at beginning of intravesical therapy, end of induction, and 6 months of maintenance therapy. Cystoscopy examination and cytology were performed at the end of induction therapy and 3-monthly thereafter. <b><i>Result:</i></b> The preliminary results at the end of 6 months following maintenance therapy showed that the demographic profile, histological stage, and grade were comparable between two groups. The QOL scores using QLQ-30 and QLQ-BLS-24 showed statistically significant differences with the Gem/Doce arm showing better outcomes. There were no progressions to higher stage, while one recurrence each was seen in both groups. Patient-related side effects measured by CTCAE (Common Terminology Criteria for Adverse Events)version 5 showed that the BCG group had higher toxicity profile as compared to Gem/Doce group. <b><i>Conclusion:</i></b> Gem/Doce combination intravesical therapy is a promising alternative to BCG for treatment of NMIBC, showing better QOL measures and lesser side effects.
DOI: 10.5281/zenodo.6605377
title: Air quality data from the article "A Random Forest Prediction of Typhoon-associated Air Quality over the Guangdong-Hong Kong-Macao Greater Bay Area, China"

description: This dataset consists of 7 files. The descriptions of the files are as follows: aqi.csv, pm25.csv, pm10.csv, so2.csv, no2.csv and o3.csv are the observed values of AQI and concentrations of PM<sub>2.5</sub>, PM<sub>10</sub>, SO<sub>2</sub>, NO<sub>2</sub> and O<sub>3</sub> in the GBA. The time range is June 2014 to December 2020. station_info.csv is the detailed information of the monitoring stations, including station number, city, longitude and latitude.
DOI: 10.15468/83uxup
title: O_BALGZAND - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) wintering on Balgzand (the Netherlands) [subsampled representation]

description: This animal tracking dataset is derived from Dokter et al. (2022, https://doi.org/10.5281/zenodo.6603023) a deposit of Movebank study 1605798640. Data have been standardized to Darwin Core using the movepub R package and are downsampled to the first GPS position per hour. The original dataset description follows. <em>O_BALGZAND - Eurasian oystercatchers (Haematopus ostralegus, Haematopodidae) wintering on Balgzand (the Netherlands)</em> is a bird tracking dataset published by Sovon, the University of Amsterdam and the Research Institute for Nature and Forest (INBO). It contains animal tracking data collected during CHIRP (Cumulative Human Impact on biRd Populations) for the study <strong>O_BALGZAND</strong> using trackers developed by the University of Amsterdam Bird Tracking System (UvA-BiTS, http://www.uva-bits.nl). The study was operational from 2010 to 2014. In total 22 individuals of Eurasian oystercatchers (<em>Haematopus ostralegus</em>) have been tagged while overwintering in the Balgzand area in the Western Wadden Sea (the Netherlands), mainly to study how they utilize intertidal flats in relation to food availability in winter. Data are uploaded from the UvA-BiTS database to Movebank and from there archived on Zenodo (see https://github.com/inbo/bird-tracking). No new data are expected. These data were collected by Sovon in collaboration with the University of Amsterdam (UvA). Funding was provided by the project Monitoring abundance, composition, development and spatial variation in macrozoobenthos and birds of the national programme for sea and coastal research (ZKO) of the Netherlands Organization for Scientific Research (NWO). Additional funding was provided by NAM and supported by the UvA-BiTS virtual lab on the Dutch national e-infrastructure, built with support of LifeWatch, the Netherlands eScience Center, SURFsara and SURFfoundation. The dataset was published with funding from Stichting NLBIF - Netherlands Biodiversity Information Facility.
DOI: 10.21227/em1y-9j15
title: A high-resolution image of mouse whole-testis cross-section analysis with cellular and tubular labels as defined by STAGETOOL.

description: For whole-testis cross-section analysis the output predictions from 1024x1024 images were merged and the whole-testis cross-section image was recompiled, with the annotated cellular and tubular objects, which were derived from cell and tubule models, respectively . This figure provides a high-resolution image of whole-testis cross-section analysis with cellular and tubular labels.
DOI: 10.15156/bio/sh1277854.08fu
title: SH1277854.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1277855.08fu
title: SH1277855.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25549/one-ouc16633994
title: Walter Sheppe (1956-1969)

description: Walter Sheppe, letters responding to an article published in ONE about military policies regarding homosexuals. He also writes to ONE often about leadership problems among homosexual organizations (1956-1969)
DOI: 10.15156/bio/sh1277856.08fu
title: SH1277856.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.