cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/303s6-wne91
title: Ecoli+Elastin

description: Raw data files of Ecoli+Elastin
description: <strong>Tilt Series Date:</strong> 2018-10-15</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Seunghyun Sim from Tirrell Lab provided the sample</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2018-10-15-15/rawdata/</p>6N_tilt15.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2018-10-15-15/rawdata/6N_tilt15.mrc"
        > <i class="download icon"></i> Download </a></p>

        6N_tilt15_full.rec,  Reconstruction (Pixel Size 1.56 nm), 444.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2018-10-15-15/3dimage_97617/6N_tilt15_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vxs4c-f1974
title: caulobacter rs_deletion

description: Raw data files of caulobacter rs_deletion
description: <strong>Tilt Series Date:</strong> 2019-12-07</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -7.0 μm,  magnification: 19500x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Debnath Ghosal collected and processed.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-12-07-127/rawdata/</p>Cc_TS62.mrc,  Tilt Series (Pixel Size 0.353 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-12-07-127/rawdata/Cc_TS62.mrc"
        > <i class="download icon"></i> Download </a></p>

        Cc_TS62.rec,  Reconstruction (Pixel Size 1.412 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-12-07-127/3dimage_112278/Cc_TS62.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/9mwtr-4qa17
title: insulin granules

description: Raw data files of insulin granules
description: <strong>Tilt Series Date:</strong> 2018-10-08</p>
<strong>Data Taken By:</strong> Xianjun Zhang</p>
<strong>Species / Specimen:</strong> Rat INS-1E pancreatic beta cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: °, constant angular increment, dosage: 53.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Sample Preparation:</strong> 25mM glucose treatment for 30mins</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/xzj2018-10-08-2/rawdata/</p>tomography2.mrc,  Tilt Series (Pixel Size 0.429 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/xzj2018-10-08-2/rawdata/tomography2.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography2.rec,  Reconstruction (Pixel Size 1.728 nm), 199.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/xzj2018-10-08-2/3dimage_105393/tomography2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fsb7q-ty356
title: P. gingivalis wild type

description: Raw data files of P. gingivalis wild type
description: <strong>Tilt Series Date:</strong> 2020-11-06</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown and harvested from plates</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-281/rawdata/</p>PginWT9_280.mrc,  Tilt Series (Pixel Size 0.333 nm), 1.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-281/rawdata/PginWT9_280.mrc"
        > <i class="download icon"></i> Download </a></p>

        PginWT9_280_full.rec,  Reconstruction (Pixel Size 1.332 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-281/3dimage_115526/PginWT9_280_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/n3jdn-bpg82
title: Clostridium thermocellum

description: CTN5-4 non-bound cellulosomes - provided by Yannick Bomble
description: <strong>Tilt Series Date:</strong> 2019-05-26</p>
<strong>Data Taken By:</strong> William Nicolas</p>
<strong>Species / Specimen:</strong> Clostridium thermocellum</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 50.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -8.0 μm,  magnification: 19500x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Nicholas Sarai's project on C. thermocellum. He did all the work except the imaging where we were both there.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2019-05-26-5/rawdata/</p>ctn5-4_sq1_cell1.mrc,  Tilt Series (Pixel Size 0.45 nm), 2.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2019-05-26-5/rawdata/ctn5-4_sq1_cell1.mrc"
        > <i class="download icon"></i> Download </a></p>

        ctn5-4_sq1_cell1_full.rec,  Reconstruction (Pixel Size 1.8 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wnj2019-05-26-5/3dimage_103146/ctn5-4_sq1_cell1_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/c7rzx-ecn89
title: Conjugation_Ecoli

description: These are conjugation samples in Ecoli. The donor strain is ANB35 and the recipient strain is  .  ANB24. More information on these strains can be found in the paper (Direct visualization of .  horizontal gene transfer). These are tomograms from (Square 1) in Grid 1 from box 4 (see .  William's notes for more information).
description: <strong>Tilt Series Date:</strong> 2019-06-23</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> ANB35, Hfr3000 mrfp1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> None</p>
<strong>Collaborators and Roles:</strong> The samples were sent by Ariel B Lindner (who is the second author on the above-mentioned . paper) in Paris. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-21/rawdata/</p>SquOneTS5.mrc,  Tilt Series (Pixel Size 0.449 nm), 47.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-21/rawdata/SquOneTS5.mrc"
        > <i class="download icon"></i> Download </a></p>

        SquOneTS5.mrc.mdoc,  798.0 B  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-21/rawdata/SquOneTS5.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/s12x9-jbm66
title: Shewanella oneidensis

description: Raw data files of Shewanella oneidensis
description: <strong>Tilt Series Date:</strong> 2019-01-13</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -9.0 μm,  magnification: 26000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> This mutant was prepared in the lab of Jeffrey A Gralnick at the University of Minnesota. This mutant was ultimately published in the EMBOJ (Kaplan et al., The EMBOJ, 2019)</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-01-13-23/rawdata/</p>Shewanella_dfliF26.mrc,  Tilt Series (Pixel Size 0.53 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-01-13-23/rawdata/Shewanella_dfliF26.mrc"
        > <i class="download icon"></i> Download </a></p>

        Shewanella_dfliF26_full.rec,  Reconstruction (Pixel Size 2.12 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-01-13-23/3dimage_100685/Shewanella_dfliF26_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.26188/29979074
title: Warming climate shapes the mutualistic interaction between truffle-like ectomycorrhizal (ECM) fungi and mycophagous mammals

description: The mutualistic interaction between truffle-like ectomycorrhizal (ECM) fungi and mycophagous mammals is fundamental to forest health, supporting fungal dispersal, soil structure, nutrient cycling, and plant community dynamics worldwide. However, this mutualism remains poorly understood in the context of climate change, where shifts in sporocarp production may alter fungal spore dispersal, the diets of their mammalian dispersers, and forest ecosystem functioning. As one of the most specialised mycophagous mammals in the world, the endangered marsupial long-footed potoroo (<i>Potorous longipes</i>, LFP) provides a powerful model to investigate these dynamics. Using ITS2 metabarcoding of a unique and extensive 23-year collection of LFP scat samples, we examined how their truffle-like ECM fungal diet is shaped by intra- and inter-annual climate variation. Our findings revealed that the LFP’s fungal diet is shaped by temperature, precipitation, and aridity, with dietary richness negatively correlated with warmer temperatures. These results highlight the vulnerability of this mutualism to climate change, with serious implications for mammal persistence, fungal diversity, and ecosystem resilience globally.This repository contains:<b>fastq_files_comparessed.tar.gz</b>: raw demulitplexed fastq files produced by Illumina NextSeq 2000 (San Diego, CA, USA) sequencing of LFP scat specimens, conducted by the Australian Genome Research Facility (AGRF) in Melbourne, Australia; and<b>Mapping_file.txt</b>: sample mapping file to process sequence data using the LotuS v2.23 pipeline (Özkurt et al., 2022).Code to perform subsequent bioinformatics and statistical analysis is available at https://github.com/emmcin/ClimateMycophagy
DOI: 10.26188/29979074.v1
title: Warming climate shapes the mutualistic interaction between truffle-like ectomycorrhizal (ECM) fungi and mycophagous mammals

description: The mutualistic interaction between truffle-like ectomycorrhizal (ECM) fungi and mycophagous mammals is fundamental to forest health, supporting fungal dispersal, soil structure, nutrient cycling, and plant community dynamics worldwide. However, this mutualism remains poorly understood in the context of climate change, where shifts in sporocarp production may alter fungal spore dispersal, the diets of their mammalian dispersers, and forest ecosystem functioning. As one of the most specialised mycophagous mammals in the world, the endangered marsupial long-footed potoroo (<i>Potorous longipes</i>, LFP) provides a powerful model to investigate these dynamics. Using ITS2 metabarcoding of a unique and extensive 23-year collection of LFP scat samples, we examined how their truffle-like ECM fungal diet is shaped by intra- and inter-annual climate variation. Our findings revealed that the LFP’s fungal diet is shaped by temperature, precipitation, and aridity, with dietary richness negatively correlated with warmer temperatures. These results highlight the vulnerability of this mutualism to climate change, with serious implications for mammal persistence, fungal diversity, and ecosystem resilience globally.This repository contains:<b>fastq_files_comparessed.tar.gz</b>: raw demulitplexed fastq files produced by Illumina NextSeq 2000 (San Diego, CA, USA) sequencing of LFP scat specimens, conducted by the Australian Genome Research Facility (AGRF) in Melbourne, Australia; and<b>Mapping_file.txt</b>: sample mapping file to process sequence data using the LotuS v2.23 pipeline (Özkurt et al., 2022).Code to perform subsequent bioinformatics and statistical analysis is available at https://github.com/emmcin/ClimateMycophagy
DOI: 10.22002/ax0kr-4e593
title: P. gingivalis ABK mutant

description: Triple gingipain ABK mutant in the P. gingivalis W50 strain
description: <strong>Tilt Series Date:</strong> 2018-01-18</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Sample Preparation:</strong> Harvested and plunge-frozen from liquid culture.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-18-27/rawdata/</p>Pgin2_35.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-18-27/rawdata/Pgin2_35.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pgin2_35_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-18-27/3dimage_91869/Pgin2_35_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fm3dc-18c19
title: P. gingivalis wild type

description: Raw data files of P. gingivalis wild type
description: <strong>Tilt Series Date:</strong> 2020-11-06</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown and harvested from plates</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-110/rawdata/</p>PginWT9_109.mrc,  Tilt Series (Pixel Size 0.333 nm), 1.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-110/rawdata/PginWT9_109.mrc"
        > <i class="download icon"></i> Download </a></p>

        PginWT9_109_full.rec,  Reconstruction (Pixel Size 1.332 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-110/3dimage_115191/PginWT9_109_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/j423w-rdk65
title: JV9264

description: Raw data files of JV9264
description: <strong>Tilt Series Date:</strong> 2018-09-06</p>
<strong>Data Taken By:</strong> Jun Zhang</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joseph</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 37 degree and OD 2.5-3.0</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-45/rawdata/</p>JV9264_B14.mrc,  Tilt Series (Pixel Size 0.2654 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-45/rawdata/JV9264_B14.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9264_B14_full.rec,  Reconstruction (Pixel Size 1.0616 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-45/3dimage_97840/JV9264_B14_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ybybd-b1745
title: CR2715_Janelia

description: Legionella thyA ΔdotG.This strain is published in Nat Mic (2018). Roy and Liu.
description: <strong>Tilt Series Date:</strong> 2018-08-27</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Legionella thyA ΔdotG.This strain is published in Nat Mic (2018). Roy and Liu.CR2715</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-27-606/rawdata/</p>CR2715_201808280022.mrc,  Tilt Series (Pixel Size 0.42 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-27-606/rawdata/CR2715_201808280022.mrc"
        > <i class="download icon"></i> Download </a></p>

        CR2715_201808280022_full.rec,  Reconstruction (Pixel Size 1.68 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2018-08-27-606/3dimage_96055/CR2715_201808280022_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mfcn1-0w407
title: P. gingivalis wild type

description: Raw data files of P. gingivalis wild type
description: <strong>Tilt Series Date:</strong> 2020-11-06</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 170.0 eV/Å²,  defocus: -6.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown and harvested from plates</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-147/rawdata/</p>PginWT9_146.mrc,  Tilt Series (Pixel Size 0.333 nm), 1.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-147/rawdata/PginWT9_146.mrc"
        > <i class="download icon"></i> Download </a></p>

        PginWT9_146_full.rec,  Reconstruction (Pixel Size 1.332 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2020-11-06-147/3dimage_115264/PginWT9_146_full.rec"
        > <i class="download icon"></i> Download </a></p>