cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/zxdxqq
title: Atlas Mycologique des Hauts-de-France - Données diverses-Données mycologiques personnelles SMCTO (Chateau-Thierry) 2021

description: Données personnelles fournies par les membres de la Société Mycologique de Chateau-Thierry et de l'Omois (Chateau-Thierry) dans le cadre du projet Atlas Mycologique des Hauts-de-France (hdf.adonif.fr) jusqu'au 31/12/2021
DOI: 10.6084/m9.figshare.11467164
title: Autophagic degradation of KAT2A/GCN5 promotes directional migration of vascular smooth muscle cells by reducing TUBA/α-tubulin acetylation

description: Macroautophagy/autophagy, a fundamental process for degradation of macromolecules and organelles, occurs constitutively at a basal level and is upregulated in response to stress. Whether autophagy regulates protein acetylation and microtubule stability in vascular smooth muscle cells (VSMCs) migration, however, remains unknown. Here, we demonstrate that the histone acetyltransferase KAT2A/GCN5 (lysine acetyltransferase 2) binds directly to the autophagosome protein MAP1LC3/LC3 (microtubule associated protein 1 light chain 3) via a conserved LC3-interacting region (LIR) domain. This interaction is required for KAT2A sequestration in autophagosomes and degradation by lysosomal acid hydrolases. Suppression of autophagy results in KAT2A accumulation. KAT2A functions as an acetyltransferase to increase TUBA/α-tubulin acetylation, promote microtubule polymerization and stability, ultimately inhibiting directional cell migration. Our findings indicate that deacetylation of TUBA and perturbation of microtubule stability via selective autophagic degradation of KAT2A are essential for autophagy-promoting VSMC migration. <b>Abbreviations:</b> ACTB: actin beta; ATAT1: alpha tubulin acetyltransferase 1; ATG: autophagy-related; BECN1: beclin 1; CQ: chloroquine; FBS: fetal bovine serum; GST: glutathione S-transferase; H4K16ac: histone H4 lysine 16 acetylation; HASMCs: human aortic smooth muscle cells; HBSS: Hank’s buffered salt solution; HDAC6: histone deacetylase 6; hMOF: human males absent on the first; IP: immunoprecipitation; KAT2A/GCN5: lysine acetyltransferase 2A; Lacta: lactacystin; LIR: LC3-interaction region; MAP1LC3: microtubule associated protein 1 light chain 3; MEFs: mouse embryonic fibroblasts; MTOC: microtubule-organizing center; PE: phosphatidylethanolamine; PtdIns3K: class III phosphatidylinositol 3-kinase; RUNX2: runt-related transcription factor 2; SIRT1: sirtuin 1; SIRT2: sirtuin 2; SQSTM1/p62: sequestosome 1; ULK1: unc-51 like autophagy activating kinase 1; VSMCs: vascular smooth muscle cells; WT: wild-type.
DOI: 10.15468/d2qf6s
title: 2021_ECO-MED_3

description: 2021_ECOMED_2:ECO-MED / données fournies par ECO-MED en 2021
DOI: 10.6084/m9.figshare.11467164.v1
title: Autophagic degradation of KAT2A/GCN5 promotes directional migration of vascular smooth muscle cells by reducing TUBA/α-tubulin acetylation

description: Macroautophagy/autophagy, a fundamental process for degradation of macromolecules and organelles, occurs constitutively at a basal level and is upregulated in response to stress. Whether autophagy regulates protein acetylation and microtubule stability in vascular smooth muscle cells (VSMCs) migration, however, remains unknown. Here, we demonstrate that the histone acetyltransferase KAT2A/GCN5 (lysine acetyltransferase 2) binds directly to the autophagosome protein MAP1LC3/LC3 (microtubule associated protein 1 light chain 3) via a conserved LC3-interacting region (LIR) domain. This interaction is required for KAT2A sequestration in autophagosomes and degradation by lysosomal acid hydrolases. Suppression of autophagy results in KAT2A accumulation. KAT2A functions as an acetyltransferase to increase TUBA/α-tubulin acetylation, promote microtubule polymerization and stability, ultimately inhibiting directional cell migration. Our findings indicate that deacetylation of TUBA and perturbation of microtubule stability via selective autophagic degradation of KAT2A are essential for autophagy-promoting VSMC migration. <b>Abbreviations:</b> ACTB: actin beta; ATAT1: alpha tubulin acetyltransferase 1; ATG: autophagy-related; BECN1: beclin 1; CQ: chloroquine; FBS: fetal bovine serum; GST: glutathione S-transferase; H4K16ac: histone H4 lysine 16 acetylation; HASMCs: human aortic smooth muscle cells; HBSS: Hank’s buffered salt solution; HDAC6: histone deacetylase 6; hMOF: human males absent on the first; IP: immunoprecipitation; KAT2A/GCN5: lysine acetyltransferase 2A; Lacta: lactacystin; LIR: LC3-interaction region; MAP1LC3: microtubule associated protein 1 light chain 3; MEFs: mouse embryonic fibroblasts; MTOC: microtubule-organizing center; PE: phosphatidylethanolamine; PtdIns3K: class III phosphatidylinositol 3-kinase; RUNX2: runt-related transcription factor 2; SIRT1: sirtuin 1; SIRT2: sirtuin 2; SQSTM1/p62: sequestosome 1; ULK1: unc-51 like autophagy activating kinase 1; VSMCs: vascular smooth muscle cells; WT: wild-type.
DOI: 10.21227/tft5-pp49
title: IEEEXtreme 13: Alfa Universe Weight Sorting

description: This dataset contains a total of 1599 submissions, with 0% correct solutions and 66% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/alfa-universe-weight-sorting/ See the included PDF document for details about the original challenge.
DOI: 10.15468/m8t94a
title: Parc éolien de Sacquenay - Eolien Sacquenay Sources Mistral Mammif Opport 2021

description: Eolien Sacquenay Sources Mistral Mammif Opport 2021
DOI: 10.6084/m9.figshare.11467203
title: Two Cd(II)-based coordination polymers constructed from different donor ligands: structural insights and anti-ovarian cancer activity evolution

description: The solvothermal reaction of Cd(NO<sub>3</sub>)<sub>2</sub>·4H<sub>2</sub>O with different donor ligands afforded two new Cd(II)-based coordination polymers [Cd(Hcia)(btz)]<sub>n</sub> (<b>1</b>, H<sub>3</sub>cia = 5-(4-carboxyphenoxy)isophthalic acid, btz = 4,4'-bi(1,2,4-triazole)) and {[Cd(2,2-bpy)(NO<sub>3</sub>)<sub>2</sub>(H<sub>2</sub>O)](DMA)}<sub>n</sub> (<b>2</b>, 2,2'-bpy = 2,2'-bipyridine). Complex <b>1</b> shows a 3 D 2-fold interpenetrated network based on 1 D infinite [–btz–Cd–btz–] chains, and complex <b>2</b> shows 1 D chain-like network based on the 2,2'-bpy chelating Cd centers extended by the NO<sub>3</sub><sup>-</sup> ions. Furthermore, the CCK-8 assay and Annexin V-FITC/PI detection was performed to evaluate the anti-cancer activity of the two complexes against the Hey ovarian cancer cell lines. Western blot was conducted for the mechanism evaluation of the complexes.
DOI: 10.6084/m9.figshare.11467203.v1
title: Two Cd(II)-based coordination polymers constructed from different donor ligands: structural insights and anti-ovarian cancer activity evolution

description: The solvothermal reaction of Cd(NO<sub>3</sub>)<sub>2</sub>·4H<sub>2</sub>O with different donor ligands afforded two new Cd(II)-based coordination polymers [Cd(Hcia)(btz)]<sub>n</sub> (<b>1</b>, H<sub>3</sub>cia = 5-(4-carboxyphenoxy)isophthalic acid, btz = 4,4'-bi(1,2,4-triazole)) and {[Cd(2,2-bpy)(NO<sub>3</sub>)<sub>2</sub>(H<sub>2</sub>O)](DMA)}<sub>n</sub> (<b>2</b>, 2,2'-bpy = 2,2'-bipyridine). Complex <b>1</b> shows a 3 D 2-fold interpenetrated network based on 1 D infinite [–btz–Cd–btz–] chains, and complex <b>2</b> shows 1 D chain-like network based on the 2,2'-bpy chelating Cd centers extended by the NO<sub>3</sub><sup>-</sup> ions. Furthermore, the CCK-8 assay and Annexin V-FITC/PI detection was performed to evaluate the anti-cancer activity of the two complexes against the Hey ovarian cancer cell lines. Western blot was conducted for the mechanism evaluation of the complexes.
DOI: 10.15468/jg73w3
title: Extension du parc éolien des Sources du Mistral sur la commune de Sacquenay - Eolien Sacquenay II suivi Mammif Opport

description: Eolien Sacquenay II suivi Mammif Opport
DOI: 10.15468/6w43sa
title: Parc éolien Col de la Fageole-DEPOBIO_Coren_annee_2021_2022-12-12_Obs_fortuite

description: Observation fortuite parc éolien Coren 2021_2022
DOI: 10.15468/tamm8j
title: Extension du parc éolien des Sources du Mistral sur la commune de Sacquenay - Eolien Sacquenay II suivi Oiseau INV

description: Eolien Sacquenay II suivi Oiseau INV
DOI: 10.21227/zbc6-q464
title: IEEEXtreme 13: Concentration Game

description: This dataset contains a total of 4100 submissions, with 12% correct solutions and 47% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/concentration-game/ See the included PDF document for details about the original challenge.
DOI: 10.5281/zenodo.10723632
title: Irrigation-induced Urban Biogenic Carbon Exchange simulated by WRF-UBC

description: This dataset is produced using the Weather Research and Forecast-Urban Biogenic Carbon (WRF-UBC) model, with a spatial coverage of CONUS urbanized areas and a temporal coverage of the summer months in 2013. This dataset can be used, as an example, to replicate the major research results presented in the journal article: The Potential of Urban Irrigation for Counteracting Carbon-Climate Feedback, authored by Peiyuan Li, Zhihua Wang, and Chenghao Wang. 

 

Original abstract: 

Global climate changes, especially the rise of global mean temperature due to the increased carbon dioxide (CO2) concentration, can, in turn, result in higher anthropogenic and biogenic greenhouse gas emissions. This potentially leads to a positive loop of climate–carbon feedback in the Earth’s climate system, which calls for sustainable environmental strategies that can mitigate both heat and carbon emissions, such as urban greening. In this study, we investigate the impact of urban irrigation over green spaces on ambient temperatures and CO2 exchange across major cities in the contiguous United States. Our modeling results indicate that the carbon release from urban ecosystem respiration is reduced by evaporative cooling in humid climate, but promoted in arid/semi-arid regions due to increased soil moisture. The irrigation-induced environmental co-benefit in heat and carbon mitigation is, in general, positively correlated with urban greening fraction and has the potential to help counteract climate–carbon feedback in the built environment.
DOI: 10.5281/zenodo.10723633
title: Irrigation-induced Urban Biogenic Carbon Exchange simulated by WRF-UBC

description: This dataset is produced using the Weather Research and Forecast-Urban Biogenic Carbon (WRF-UBC) model, with a spatial coverage of CONUS urbanized areas and a temporal coverage of the summer months in 2013. This dataset can be used, as an example, to replicate the major research results presented in the journal article: The Potential of Urban Irrigation for Counteracting Carbon-Climate Feedback, authored by Peiyuan Li, Zhihua Wang, and Chenghao Wang. 

 

Original abstract: 

Global climate changes, especially the rise of global mean temperature due to the increased carbon dioxide (CO2) concentration, can, in turn, result in higher anthropogenic and biogenic greenhouse gas emissions. This potentially leads to a positive loop of climate–carbon feedback in the Earth’s climate system, which calls for sustainable environmental strategies that can mitigate both heat and carbon emissions, such as urban greening. In this study, we investigate the impact of urban irrigation over green spaces on ambient temperatures and CO2 exchange across major cities in the contiguous United States. Our modeling results indicate that the carbon release from urban ecosystem respiration is reduced by evaporative cooling in humid climate, but promoted in arid/semi-arid regions due to increased soil moisture. The irrigation-induced environmental co-benefit in heat and carbon mitigation is, in general, positively correlated with urban greening fraction and has the potential to help counteract climate–carbon feedback in the built environment.
DOI: 10.21227/wjtd-4x30
title: IEEEXtreme 13: Merchant Association

description: This dataset contains a total of 2584 submissions, with 1% correct solutions and 17% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/merchant-association/ See the included PDF document for details about the original challenge.
DOI: 10.6084/m9.figshare.24050308
title: General Nonlinear Function-on-Function Regression via Functional Universal Approximation

description: Various linear or nonlinear function-on-function (FOF) regression models have been proposed to study the relationship between functional variables, where certain forms are assumed for the relationship. However, because functional variables take values in infinite-dimensional spaces, the relationships between them can be much more complicated than those between scalar variables. The forms in existing FOF models may not be enough to cover a wide variety of relationships between functional variables, and hence the applicability of these models can be limited. We consider a general nonlinear FOF regression model without any specific assumption on the model form. To fit the model, inspired by the universal approximation theorem for the neural networks with “arbitrary width,” we develop a functional universal approximation theorem which asserts that a wide range of general maps between functional variables can be approximated with arbitrary accuracy by members in our proposed family of maps. This family is “fully” functional in that the complexity of the maps within the family is completely determined by the smoothness of the component functions in the map. With this functional universal approximation theorem, we develop a novel method to fit the general nonlinear FOF regression model, which includes all existing FOF models as special cases. The complexity of the fitted model is controlled by smoothness regularization, without the necessity to choose the number of hidden neurons. Supplemental materials for code and additional information are available online.
DOI: 10.6084/m9.figshare.24050308.v2
title: General Nonlinear Function-on-Function Regression via Functional Universal Approximation

description: Various linear or nonlinear function-on-function (FOF) regression models have been proposed to study the relationship between functional variables, where certain forms are assumed for the relationship. However, because functional variables take values in infinite-dimensional spaces, the relationships between them can be much more complicated than those between scalar variables. The forms in existing FOF models may not be enough to cover a wide variety of relationships between functional variables, and hence the applicability of these models can be limited. We consider a general nonlinear FOF regression model without any specific assumption on the model form. To fit the model, inspired by the universal approximation theorem for the neural networks with “arbitrary width,” we develop a functional universal approximation theorem which asserts that a wide range of general maps between functional variables can be approximated with arbitrary accuracy by members in our proposed family of maps. This family is “fully” functional in that the complexity of the maps within the family is completely determined by the smoothness of the component functions in the map. With this functional universal approximation theorem, we develop a novel method to fit the general nonlinear FOF regression model, which includes all existing FOF models as special cases. The complexity of the fitted model is controlled by smoothness regularization, without the necessity to choose the number of hidden neurons. Supplemental materials for code and additional information are available online.
DOI: 10.5281/zenodo.10158385
title: DSF_DATA
DOI: 10.5281/zenodo.10158386
title: DSF_DATA
DOI: 10.21227/ve33-ab49
title: IEEEXtreme 13: Minimum Permutation

description: This dataset contains a total of 11875 submissions, with 8% correct solutions and 61% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/minimum-permutation/ See the included PDF document for details about the original challenge.
DOI: 10.5281/zenodo.10655167
title: Datasets for the Publication "Simulated Convective Cell and System Growth Bias Dependencies on Atmospheric Instability and Model Resolution"

description: Datasets for the Publication "Simulated Convective Cell and System Growth Biases Dependencies on Atmospheric Instability and Model Resolution"

a) Seasonal: Observed and simulated convective cell track datasets at 3-km grid spacing

b) Simulated convective cases: Multiscale convective cell track datasets at 3-km, 1-km, and 333-m grid spacing

c) WRF model setup for case runs in low and high CAPE conditions
DOI: 10.21227/wwz7-gt46
title: IEEEXtreme 13: Unicornosaurus

description: This dataset contains a total of 3606 submissions, with 1% correct solutions and 24% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/unicornosaurus/ See the included PDF document for details about the original challenge.
DOI: 10.6084/m9.figshare.23001790
title: Additional file 3 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 3: Table S1. Codon frequencies and relative synonymous codon usage (RSCU) values of the thirteen Pholidota cp genomes.
DOI: 10.6084/m9.figshare.23001790.v1
title: Additional file 3 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 3: Table S1. Codon frequencies and relative synonymous codon usage (RSCU) values of the thirteen Pholidota cp genomes.
DOI: 10.6084/m9.figshare.23001796
title: Additional file 4 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 4: Table S2. Types and numbers of long repeats in the thirteen Pholidota cp genomes.
DOI: 10.6084/m9.figshare.23001796.v1
title: Additional file 4 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 4: Table S2. Types and numbers of long repeats in the thirteen Pholidota cp genomes.
DOI: 10.6084/m9.figshare.23001799
title: Additional file 5 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 5: Table S3. Distribution of tandem repeats in the thirteen Pholidota cp genomes.
DOI: 10.6084/m9.figshare.23001799.v1
title: Additional file 5 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 5: Table S3. Distribution of tandem repeats in the thirteen Pholidota cp genomes.
DOI: 10.6084/m9.figshare.23001802
title: Additional file 6 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 6: Table S4. Types and numbers of SSRs distributed in LSC, SSC, IR regions based on nucleotide repeat units in the thirteen Pholidota plastomes.
DOI: 10.6084/m9.figshare.23001802.v1
title: Additional file 6 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 6: Table S4. Types and numbers of SSRs distributed in LSC, SSC, IR regions based on nucleotide repeat units in the thirteen Pholidota plastomes.
DOI: 10.6084/m9.figshare.23001805
title: Additional file 7 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 7: Table S5. The statistics of SNPs and InDels identified for each plastome alignment with Pholidota cp genome as a reference.
DOI: 10.6084/m9.figshare.23001805.v1
title: Additional file 7 of Comparative analyses and phylogenetic relationships of thirteen Pholidota species (Orchidaceae) inferred from complete chloroplast genomes

description: Additional file 7: Table S5. The statistics of SNPs and InDels identified for each plastome alignment with Pholidota cp genome as a reference.
DOI: 10.21227/n167-7k25
title: IEEEXtreme 13: Monokeros

description: This dataset contains a total of 7681 submissions, with 1% correct solutions and 53% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/monokeros/ See the included PDF document for details about the original challenge.
DOI: 10.6084/m9.figshare.23001821
title: Additional file 2 of Metagenomics reveals the habitat specificity of biosynthetic potential of secondary metabolites in global food fermentations

description: Additional file 2: Supplementary Data 2. The taxonomic annotation of 653 metagenome-assembled genomes (MAGs).
DOI: 10.34740/kaggle/dsv/5958839
title: Pypi sython panda
DOI: 10.7910/dvn/d5t9ht
title: elderly-lyon-2018

description: CKD-EPI, FAS, LMR and BIS 1 in older person .
DOI: 10.7910/dvn/d5t9ht/f2ga1l
title: elderly_lyon.csv
DOI: 10.15468/dl.jxjgvv
title: Occurrence Download

description: A dataset containing 2622 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 3) Distribution of planktonic foraminifera in the early Cretaceous and early Eocene to late Oligocene sections of ODP Hole 149-897C"
 ]
}

 The dataset includes 2622 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010345-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qas9j7
title: Occurrence Download

description: A dataset containing 1093 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 11.2113694131377",
 "DecimalLongitude is less than 11.2144289663221",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1093 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011971-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wojlhq
title: Occurrence Download

description: A dataset containing 297 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pentacalia nitida (Kunth) Cuatrec."
 ]
}

 The dataset includes 297 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010346-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wtcarv
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Ipomoea eximia House"
 ]
}

 The dataset includes 7 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004375-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.