cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/rs4e-h958
title: Parkes observations for project P1005 semester 2021APRS_03

description: We propose to conduct observations of PSR J1812-15, a 1-s pulsar in a 20.3-hr circular orbit around a light companion which also exhibits variable emission (turning `on’ and `off’). Binary pulsars are valuable objects of scientific study, allowing for a wide range of applications, including tests of gravity, probes of the neutron star equation of state and fossil records of stellar evolution. Long spin-period pulsars in binary systems are generally much rarer than faster-spinning recycled pulsars, and represent an under-explored region of pulsar binary evolution. We propose a two-pronged campaign designed to address individual aspects of PSR J1812-15’s behaviour. Firstly, although we have developed a binary solution as a consequence of previous P1005 observations, we are still unable to develop a phase-connected timing solution, a key step in understanding this pulsar and its binary formation process. We therefore propose a 6-month monitoring campaign intended to provide the additional constraint required to determine a unique solution. Secondly, we have identified a correlation between the pulsar’s detectability and its orbital phase, suggesting that an eclipse or other complex interaction between the pulsar and its binary companion is at least partially responsible for its variable emission. We propose to monitor a series of consecutive orbits so as to fully cover the pulsar’s orbital phase, exploiting the wide bandwidth of the UWL receiver to distinguish between variability due to the binary companion or other sources (e.g. intrinsic pulse nulling).
DOI: 10.5517/ccdc.csd.cc26l1pk
title: CCDC 2043138: Experimental Crystal Structure Determination

description: Related Article: Iván J. Bazany-Rodríguez, María K. Salomón-Flores, Alejandro O. Viviano-Posadas, Marco A. García-Eleno, Joaquín Barroso-Flores, Diego Martínez-Otero, Alejandro Dorazco-González|2021|Dalton Trans.|50|4255|doi:10.1039/D0DT04228E
DOI: 10.5517/ccdc.csd.cc26l1ql
title: CCDC 2043139: Experimental Crystal Structure Determination

description: Related Article: Iván J. Bazany-Rodríguez, María K. Salomón-Flores, Alejandro O. Viviano-Posadas, Marco A. García-Eleno, Joaquín Barroso-Flores, Diego Martínez-Otero, Alejandro Dorazco-González|2021|Dalton Trans.|50|4255|doi:10.1039/D0DT04228E
DOI: 10.15161/oar.it/73824
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.5281/zenodo.4727700
title: Simulation generated data for: Growth Rules for the Repair of Asynchronous Irregular Neuronal Networks after Peripheral Lesions

description: This includes the data generated by simulations in the work titled "Growth Rules for the Repair of Asynchronous Irregular Neuronal Networks after Peripheral Lesions": https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008996 <br> The data includes 3 compressed files: - 201908061027-main.tar.gz: main simulation with both structural and synaptic plasticity enabled<br> - 201908051154-strp-only.tar.gz: simulation with only structural plasticity enabled, and synaptic plasticity disabled<br> - 201908151244-synp-only.tar.gz: simulation with only synaptic plasticity enabled, and structural plasticity disabled.<br> <br> The simulation source code can be found here on GitHub: https://github.com/sanjayankur31/SinhaEtAl2020 and also on ModelDB at: http://modeldb.yale.edu/267035<br> <br> The source code used to process and analyse the generated data is here on GitHub: https://github.com/sanjayankur31/Sinha2016-scripts<br> <br> Processed data and plotting scripts used to generated graphs in the paper are here on GitHub: https://github.com/sanjayankur31/SinhaEtAl2020-figure-scripts
description: {"references": ["Sinha A, Metzner C, Davey N, Adams R, Schmuker M, et al. (2021) Growth rules for the repair of Asynchronous Irregular neuronal networks after peripheral lesions. PLOS Computational Biology 17(6): e1008996."]}
DOI: 10.5281/zenodo.4727699
title: Simulation generated data for: Growth Rules for the Repair of Asynchronous Irregular Neuronal Networks after Peripheral Lesions

description: This includes the data generated by simulations in the work titled "Growth Rules for the Repair of Asynchronous Irregular Neuronal Networks after Peripheral Lesions": https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008996 <br> The data includes 3 compressed files: - 201908061027-main.tar.gz: main simulation with both structural and synaptic plasticity enabled<br> - 201908051154-strp-only.tar.gz: simulation with only structural plasticity enabled, and synaptic plasticity disabled<br> - 201908151244-synp-only.tar.gz: simulation with only synaptic plasticity enabled, and structural plasticity disabled.<br> <br> The simulation source code can be found here on GitHub: https://github.com/sanjayankur31/SinhaEtAl2020 and also on ModelDB at: http://modeldb.yale.edu/267035<br> <br> The source code used to process and analyse the generated data is here on GitHub: https://github.com/sanjayankur31/Sinha2016-scripts<br> <br> Processed data and plotting scripts used to generated graphs in the paper are here on GitHub: https://github.com/sanjayankur31/SinhaEtAl2020-figure-scripts
description: {"references": ["Sinha A, Metzner C, Davey N, Adams R, Schmuker M, et al. (2021) Growth rules for the repair of Asynchronous Irregular neuronal networks after peripheral lesions. PLOS Computational Biology 17(6): e1008996."]}
DOI: 10.7910/dvn/if54ib
title: spatstat R code

description: Notes about this code can be found in the script.
DOI: 10.7910/dvn/knj9my
title: Favaroetal_YardangPoints_PublicFile

description: This layer file (.lyrx) contains the locations of each yardang identified in the study. Users are encouraged to use Esri's Living Atlas Portal to import an appropriate basemap.
DOI: 10.7910/dvn/5mtnmd
title: AllBuffers_PublicData_Favaroetal

description: This layer file (.lyrx) contains the 40 buffers used in the statistical analysis. Users are encouraged to use Esri's Living Atlas Portal to import an appropriate basemap.
DOI: 10.6084/m9.figshare.14717130.v1
title: Analysis of the Infection Status for Healthcare Workers in Hubei, China: A Multi-Scale Perspective

description: Analysis of the Infection Status for Healthcare Workers in Hubei, China: A Multi-Scale Perspective
DOI: 10.6084/m9.figshare.14717130
title: Analysis of the Infection Status for Healthcare Workers in Hubei, China: A Multi-Scale Perspective

description: Analysis of the Infection Status for Healthcare Workers in Hubei, China: A Multi-Scale Perspective
DOI: 10.25550/1-ysf2
title: Mandible Development

description: Mutations in SHH are associated with holoprosencephaly syndromes, with craniofacial malformations ranging from cyclopia to cleft lip/palate to midfacial and mandibular hypoplasia. Mouse embryos lacking Shh exhibit cyclopia and fail to form maxilla and mandible. Tissue-specific inactivation of Shh in the embryonic pharyngeal epithelium (Shhpeko) or neural crest cell-specific inactivation of Smo (Smoncko), which encodes an obligatory transducer of hedgehog signaling, results in severe micrognathia and tongue agenesis in mice. Both Shhpeko and Smoncko embryos showed increased apoptosis of neural crest cells populating the embryonic mandibular arches, but little is known about the molecular mechanisms mediating Shh signaling regulation of mandible development. We found that the Smoncko mutant embryos exhibit ectopic ossification in the oral side of the embryonic mandibular mesenchyme, leading to partial duplication of the dentary bones. Furthermore, we found that phospho-Smad1/5/9 and BMP target genes Msx1, Msx2, and Alx4, exhibit preferential expression in the aboral side of the distal mandibular arch mesenchyme in wildtype embryos but are ectopically activated in the oral side of the mandibular arch mesenchyme in Smoncko embryos. Since Bmp4 is expressed in the distal mandibular arch epithelium, whereas Shh is expressed in the oral epithelium during early mandibular development, and since BMP signaling is known to regulate apoptosis and bone formation, these results suggest a crucial, but previously unappreciated, mechanism involving interactions of Shh and Bmp4 signaling pathways in patterning the oral-aboral axis of the developing mandible. We proposed two comprehensive specific aims to test the hypothesis that Shh signaling regulates the Bmp4-Msx1/2 and Bmp4-Alx4 pathways to control survival and patterning of the developing mandibular mesenchyme along the oral-aboral axis. These studies will fill a longstanding gap in the understanding of molecular mechanisms patterning the oral-aboral axis of the mammalian jaw and significantly improve our understanding of pathogenic mechanisms of mandibular developmental defects.
DOI: 10.6084/m9.figshare.12690116.v2
title: Infant Gut Dataset integration in the AgnostosDB

description: Results of the integration of the Sharon et al (2013) (https://genome.cshlp.org/content/23/1/111) Infant Gut Dataset (IGD) into the AgnostosDB (Vanni et al. 2020) (https://doi.org/10.6084/m9.figshare.12459056)<br>
DOI: 10.25375/uct.14717082.v1
title: Habitat selection of Bearded Vultures (Gypaetus barbatus) in southern Africa: implications for conservation.

description: The Bearded Vulture, Gypaetus barbatus, was previously distributed across southern and western South Africa, as far south as Cape Town. Today, the entire population in southern Africa is restricted to the Lesotho highlands and the Drakensberg escarpment and nearby mountains in South Africa, where the population continues to decline. Research has shown that territorial abandonment is apparently associated with the density of human settlements within 10km of a territory. This pattern was assumed to be linked to the increased risk of unnatural mortalities in areas with higher human presence. However, habitat use and habitat selection, especially whether the species actively avoid human settlements has not yet been explored and could also been contributing to this pattern. In this study, we used data fromnine adult Bearded Vultures fitted with Global Positioning System (GPS) satellite tags to determine which habitat is selected by breeding adults. We modelled habitat selection in relation to various topographic and habitat variables, including information on built-up areas. We predicted that birds would select areas of grassland and avoid area with high built-up density and area close to it. We found that Bearded Vultures selected areas closer to their nest sites and supplementary feeding sites, with steeper slopes, highly rugged terrain. In terms of habitat, they selected areas with grassland and avoided areas with forest, and cropland was neither selected nor avoided. As predicted Bearded Vultures avoided area with high proportions of built-up and avoided area close to it. These results suggest that Bearded Vulture may be sensitive to the negative impacts of a changing landscape in its distribution range. These results can help conservation managers in guiding development and restoration work in the breeding range of adult Bearded Vultures.<br>The code and datasets provided complement the methods for my research, detailing the steps taken to analyse the data and produce results.
DOI: 10.25375/uct.14717082
title: Habitat selection of Bearded Vultures (Gypaetus barbatus) in southern Africa: implications for conservation.

description: The Bearded Vulture, Gypaetus barbatus, was previously distributed across southern and western South Africa, as far south as Cape Town. Today, the entire population in southern Africa is restricted to the Lesotho highlands and the Drakensberg escarpment and nearby mountains in South Africa, where the population continues to decline. Research has shown that territorial abandonment is apparently associated with the density of human settlements within 10km of a territory. This pattern was assumed to be linked to the increased risk of unnatural mortalities in areas with higher human presence. However, habitat use and habitat selection, especially whether the species actively avoid human settlements has not yet been explored and could also been contributing to this pattern. In this study, we used data fromnine adult Bearded Vultures fitted with Global Positioning System (GPS) satellite tags to determine which habitat is selected by breeding adults. We modelled habitat selection in relation to various topographic and habitat variables, including information on built-up areas. We predicted that birds would select areas of grassland and avoid area with high built-up density and area close to it. We found that Bearded Vultures selected areas closer to their nest sites and supplementary feeding sites, with steeper slopes, highly rugged terrain. In terms of habitat, they selected areas with grassland and avoided areas with forest, and cropland was neither selected nor avoided. As predicted Bearded Vultures avoided area with high proportions of built-up and avoided area close to it. These results suggest that Bearded Vulture may be sensitive to the negative impacts of a changing landscape in its distribution range. These results can help conservation managers in guiding development and restoration work in the breeding range of adult Bearded Vultures.<br>The code and datasets provided complement the methods for my research, detailing the steps taken to analyse the data and produce results.
DOI: 10.5281/zenodo.4889278
title: CWTS Leiden Ranking 2021

description: This data set provides the statistics made available in the 2021 edition of the CWTS Leiden Ranking. The Leiden Ranking 2021 is a bibliometric ranking of 1225 major universities worldwide. The ranking provides statistics on scientific impact, collaboration, open access publishing, and gender diversity. The ranking is based on bibliographic data from the Web of Science database produced by Clarivate Analytics.
DOI: 10.6084/m9.figshare.14474214.v1
title: Data from: Colonial choanoflagellate isolated from Mono Lake harbors a microbiome

description: Choanoflagellates offer key insights into bacterial influences on the origin and early evolution of animals. Here we report the isolation and characterization of a new colonial choanoflagellate species, <i>Barroeca monosierra</i>, that, unlike previously characterized species, harbors a stable microbiome. <i>B. monosierra</i> was isolated from Mono Lake, California and forms large spherical colonies that are more than an order of magnitude larger than those formed by the closely related <i>Salpingoeca rosetta</i>. By designing fluorescence <i>in situ</i> hybridization probes from metagenomic sequences, we found that <i>B. monosierra</i> colonies are colonized by members of the halotolerant and closely related Saccharospirillaceae and Oceanospirillaceae, as well as purple sulfur bacteria (Ectothiorhodospiraceae) and non-sulfur Rhodobacteraceae. This relatively simple microbiome in a close relative of animals presents a new experimental model for investigating the evolution of stable interactions among eukaryotes and bacteria.<br>This dataset contains all relevant data from the phylogenetic trees presented in Figure 1C and Figure S1. Each archive contains the following subdirectories:<br>input: input sequences in FASTA formatpolyA_removed: polyA tails removed by trimest (for protein coding genes only)aligned: sequence alignments by FSAtrimmed: trimmed alignments by trimAlRAxML: input, run parameters and output of RAxML maximum likelihood tree reconstructionMrBayes: input, run parameters and output of MrBayes Bayesian tree reconstruction<br>
DOI: 10.6084/m9.figshare.14717212.v1
title: Crystal transfer from magma to wallrock during syntectonic granite emplacement

description: Mineral chemical data
DOI: 10.6084/m9.figshare.14717212
title: Crystal transfer from magma to wallrock during syntectonic granite emplacement

description: Mineral chemical data
DOI: 10.25646/8576
title: Tagesdaten-CSV aus dem DIVI-Intensivregister

description: Die Tagesdaten-CSV entspricht einem Auszug der Daten des DIVI-Intensivregisters. Die Datei enthält eine Aggregation der aktuellsten Meldungen pro Landkreis. Es werden die aktuell gemeldeten Anzahlen der COVID-19 Intensivfälle sowie die gemeldeten intensivmedizinischen Behandlungskapazitäten angezeigt. Die Tagesdaten-CSV liefert dabei ausschließlich einen Blick auf die Daten gemäß dem Stand des betrachteten Tages. Die Daten sind im situationsbedingten Kontext aufbereitet, damit sind verschiedene Tagesdaten-CSVs u.U. nicht direkt miteinander vergleichbar. Die aktuellsten Meldungen werden im gewählten Betrachtungszeitfenster über alle Meldebereiche und Standorte aufsummiert. Weitere Informationen sind zu finden unter https://www.intensivregister.de/#/faq
DOI: 10.6084/m9.figshare.14717277
title: Relation between Lean & Six Sigma and healthcare performance

description: This contains the data related to Quality and Business performances of the Indian hospital collected from survey. <br>The Quality and Business performance are also given with and without Lean or Six Sigma implementation. In addition, the performances are given with and without any quality initiatives implementation. <br><br>
DOI: 10.6084/m9.figshare.14717277.v1
title: Relation between Lean & Six Sigma and healthcare performance

description: This contains the data related to Quality and Business performances of the Indian hospital collected from survey. <br>The Quality and Business performance are also given with and without Lean or Six Sigma implementation. In addition, the performances are given with and without any quality initiatives implementation. <br><br>
DOI: 10.5281/zenodo.4892826
title: Supplemental Material "A Framework for Federated SPARQL Query Processing over Heterogeneous Linked Data Fragments"

description: Supplemental Material to the publication "A Framework for Federated SPARQL Query Processing over Heterogeneous Linked Data Fragments". This includes source code and experimental results. A Readme is provided with more details.
DOI: 10.5281/zenodo.4786015
title: Supplemental Material "A Framework for Federated SPARQL Query Processing over Heterogeneous Linked Data Fragments"

description: Supplemental Material to the publication "A Framework for Federated SPARQL Query Processing over Heterogeneous Linked Data Fragments". This includes source code and experimental results. A Readme is provided with more details.
DOI: 10.5281/zenodo.4892830
title: A content analysis of health and science-related hoaxes during COVID-19 in Spain

description: This dataset contains the coding of a sample of hoaxes published by these three fact-checking organizations over a three-month period (March 11 to June 10, 2020), which started when the WHO declared the pandemic. The sample includes hoaxes (N=533) debunked by three Spanish fack-checking organizations: Maldita.es (N = 327), Newtral (N = 143), and EFE Verifica (N = 63). The coding includes: Subject of the hoax: science/health, politics/government, other. Next, all science/health hoaxes (N = 187) were coded, and the following variables were analyzed: Platform used to spread the hoax: networks (in general), Twitter, Facebook, WhatsApp, Instagram, YouTube, and others. Formats used: text, audio, image, video, other. Geographical scope: local, national, international, unspecified/not applicable. Type of hoax: joke, exaggeration, decontextualization, deception. Topic of hoaxes related to science/health: scientific research, scientific policy and health management, advice issued to the public, and others. Topic of hoaxes related to scientific research: origin of the virus, transmissibility, fatality rate, treatments, vaccines, etc. Source type: anonymous, spoofed, fictitious, real. Non-anonymous sources: members of the public, business, government, professional, healthcare/science. Type of healthcare/science sources: researchers, international scientific organizations, national scientific organizations, health professionals, and others.
DOI: 10.5281/zenodo.4892829
title: A content analysis of health and science-related hoaxes during COVID-19 in Spain

description: This dataset contains the coding of a sample of hoaxes published by these three fact-checking organizations over a three-month period (March 11 to June 10, 2020), which started when the WHO declared the pandemic. The sample includes hoaxes (N=533) debunked by three Spanish fack-checking organizations: Maldita.es (N = 327), Newtral (N = 143), and EFE Verifica (N = 63). The coding includes: Subject of the hoax: science/health, politics/government, other. Next, all science/health hoaxes (N = 187) were coded, and the following variables were analyzed: Platform used to spread the hoax: networks (in general), Twitter, Facebook, WhatsApp, Instagram, YouTube, and others. Formats used: text, audio, image, video, other. Geographical scope: local, national, international, unspecified/not applicable. Type of hoax: joke, exaggeration, decontextualization, deception. Topic of hoaxes related to science/health: scientific research, scientific policy and health management, advice issued to the public, and others. Topic of hoaxes related to scientific research: origin of the virus, transmissibility, fatality rate, treatments, vaccines, etc. Source type: anonymous, spoofed, fictitious, real. Non-anonymous sources: members of the public, business, government, professional, healthcare/science. Type of healthcare/science sources: researchers, international scientific organizations, national scientific organizations, health professionals, and others.
DOI: 10.6084/m9.figshare.14345561
title: IndividualReinAsym versus AverageReinAsym

description: Data set of 27 horses quantifying movement symmetry of head, withers and pelvis in trot on straight and left and right circles at two different speeds and two different surfaces.Sheet1: OrigAndInverted: data set with original data and data inverted to render baseline (straight line average) positive. Also rein labels with left and right as well as inside outside.Sheet2: StrVsLRCombo: 11 movement symmetry parameters as average across left and right rein. Labelled with speed and surface as well as straight/circle.Sheet3: StrVsIndivRein: individual rein asymmetry data with speed, surface, left/right as well as inside/outside. Inside/outside labels can differ between individual variables. <br><br>
DOI: 10.6084/m9.figshare.14345561.v1
title: IndividualReinAsym versus AverageReinAsym

description: Data set of 27 horses quantifying movement symmetry of head, withers and pelvis in trot on straight and left and right circles at two different speeds and two different surfaces.Sheet1: OrigAndInverted: data set with original data and data inverted to render baseline (straight line average) positive. Also rein labels with left and right as well as inside outside.Sheet2: StrVsLRCombo: 11 movement symmetry parameters as average across left and right rein. Labelled with speed and surface as well as straight/circle.Sheet3: StrVsIndivRein: individual rein asymmetry data with speed, surface, left/right as well as inside/outside. Inside/outside labels can differ between individual variables. <br><br>
DOI: 10.5281/zenodo.4883640
title: Data related to article "Sialic Acids as Receptors for Pathogens"

description: Data associated with Figure 3 from the article <strong>Sialic Acids as Receptors for Pathogens</strong> published in the journal <em>Biomolecules</em> (available here). Corrected the species list from previous version.