cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15684118
title: Assisting Stakeholders in Class Diagram Interpretation with LLMs: a Work in Progress - Replication Package

description: This is a replication package for the paper: Assisting Stakeholders in Class DiagramInterpretation with LLMs: a Work in Progress, by Chiara Mannari, Tommaso Turchi, Manlio Bacco and Alessio Malizia

 

Abstract: Diagrams can be valuable tools in requirements engineering to establish a shared understanding between software engineers and stakeholders. However, interacting with these visual representations can be challenging for some stakeholders who prefer textual descriptions and may need support to interpret notation elements and understand the diagram structure and meaning. To address this need, we explore the use of Large Language Models to effectively assist stakeholders interacting with diagrams by providing automatic textual explanations and contextual guidance. Specifically, we aim to design and evaluate with stakeholders an interactive layer (integrated into an end-user-oriented modelling tool) that provides automatic diagram explanations in natural language. As a first step toward our research objective, this paper investigates the capability of GPT4 to generate appropriate textual descriptions from domain models. We use a test data set consisting of UML class diagrams in various formats, belonging to the domain of digital agriculture, and develop a set of prompts to generate the interactive explanatory layer. We conduct a technical evaluation of the output, focusing on correctness, completeness, and understandability. The results provide valuable insights to inform future design and research, while also revealing potential challenges in real-world applications.

The replication package consists of the following folders:

input data: contains the three cases analysed with input files in multiple formats and a dataset describing the input data

prompt results: contains results obtained from the prompts, organised by prompt

technical evaluation: contains raw data from the analysis for each prompt result in csv format; a phyton colab notebook with the analysis; and a folder with figures resulting from the analysis
DOI: 10.15468/dl.vajtyc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campylomormyrus bredoi (Poll, 1945)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((46.4834 11.218,46.1382 11.2722,46.1382 11.0599,51.6417 11.0599,51.7324 12.0635,51.5026 12.2885,50.8876 12.4788,50.4313 12.4022,50.0359 12.0384,49.0834 11.7794,48.4763 11.8079,47.8551 11.6161,47.093 11.7051,46.4834 11.218))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051618-250525065834625/datasets/export for details.
DOI: 10.15468/dl.w9ec25
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lobelia patula L.f.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -23.2724,25.1306 -24.0715,25.5395 -24.0715,25.5395 -23.2724))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051619-250525065834625/datasets/export for details.
DOI: 10.15468/dl.kmasck
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campylomormyrus bredoi (Poll, 1945)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((46.3328 2.047,46.3452 2.0599,46.1382 2.0599,46.1382 1.9309,46.3328 2.047))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051620-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.29337446.v1
title: Raw data for nitrogen cycling in estuarine plastic biofilms

description: This dataset supports a study investigating nitrogen (N) cycling dynamics in estuarine plastic-associated microbial biofilms.
DOI: 10.15468/dl.zeg5gz
title: Occurrence Download

description: A dataset containing 36515 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Taxon occurrence data for the FungalRoot database"
 ]
}

 The dataset includes 36515 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051621-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sd6mn5
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lobelia patula L.f.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.2855 -34.7533,20.509 -34.5676,20.509 -32.9007,17.7723 -32.9007,17.8156 -33.0786,18.3471 -33.7176,18.3748 -33.8287,18.2181 -34.0492,18.3197 -34.3408,18.4452 -34.429,18.5435 -34.4213,18.5872 -34.3667,18.5363 -34.167,18.7345 -34.1508,18.7216 -34.3637,18.7808 -34.4521,19.0289 -34.4206,19.0831 -34.4835,19.2655 -34.5017,19.2032 -34.6157,19.2394 -34.6926,19.375 -34.6963,19.6091 -34.8524,19.8251 -34.8396,19.9798 -34.9064,20.1081 -34.8731,20.1517 -34.7847,20.2855 -34.7533))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051622-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25934/pr00011416
title: Data Challenge: Global Surveillance of Resistance to Ampicillin–Gentamicin and Ceftriaxone in Children with Severe Infections: Evidence to Inform WHO AWaRe Guidelines

description: Antimicrobial resistance (AMR) poses a critical global health threat, particularly impacting empiric therapy for severe infections including respiratory and bloodstream infections. WHO recommends ampicillin-gentamicin combinations or ceftriaxone as first-line empiric treatments for severe illnesses. However, increasing global resistance threatens their effectiveness, compromising treatment outcomes and patient safety. Studies reveal alarming resistance rates among paediatric pathogens: Escherichia coli (ampicillin resistance ranges from 50–93%, gentamicin resistance ranges from 13–56%), Klebsiella pneumoniae (universal resistance to ampicillin, gentamicin resistance ranges from 60–91%, and ceftriaxone resistance has risen to 91% in some areas). The rates of co-resistance data, however, are rarely reported.
This study will assess and map global resistance rates to ampicillin-gentamicin combination therapy and ceftriaxone, utilizing surveillance data from ATLAS (Pfizer), KEYSTONE (Paratek), Innoviva Specialty Therapeutics, and GEARS (Venatorx) databases. Together with IHME mortality estimates and global health equity indicators, resistance patterns, associated mortality burden and stewardship infrastructure will be analysed regionally and temporally, identifying hotspots and trends to inform empiric treatment recommendations. 
A mixed-methods approach will be utilized, combining resistance surveillance data with existing literature on the impact of syndrome-specific antimicrobial resistance to evaluate clinical implications. Advanced statistical analyses will assess pooled resistance prevalence, genotype-phenotype correlations, time-series modelling of resistance patterns, identifying key drivers of resistance variability. We will develop a region-specific index as a composite metric integrating resistance rates to ampicillin, gentamicin and ceftriaxone to support  stewardship planning prioritization. Additionally, we will explore alternative empiric regimens and stewardship strategies in high resistance contexts, with attention to clinical applicability and implications for resource-limited settings.
Findings will identify areas where WHO-recommended empiric regimens require re-evaluation and regions with high resistance and low diagnostics or stewardship infrastructure. This work aims not only to maintain antibiotic efficacy but also to strengthen global stewardship efforts, ultimately improving patient outcomes and reducing the AMR burden.
DOI: 10.15468/dl.57ay9s
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campylomormyrus bredoi (Poll, 1945)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((55.1382 -5.4732,54.9352 -5.6353,54.8984 -5.9912,55.1382 -6.2691,55.1382 -5.4732))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051623-250525065834625/datasets/export for details.
DOI: 10.15468/dl.k4qy6g
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lobelia patula L.f.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.628 -23.023,35.6007 -22.9702,35.6007 -23.165,35.628 -23.023))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051624-250525065834625/datasets/export for details.
DOI: 10.15468/dl.s8kegh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campylomormyrus bredoi (Poll, 1945)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((54.7419 -4.6698,55.1382 -5.0908,55.1382 -3.2684,55.0126 -3.2506,54.7023 -3.7189,54.8472 -4.0798,54.7419 -4.6698))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051625-250525065834625/datasets/export for details.
DOI: 10.15468/dl.2h5dr9
title: Occurrence Download

description: A dataset containing 8493025 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is South America",
 "Country is one of (Peru, Brazil, Colombia, Ecuador, Venezuela (Bolivarian Republic of), Bolivia (Plurinational State of), French Guiana)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 8493025 records from 732 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051612-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7amyt4
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Adelpha malea Felder, 1861"
 ]
}

 The dataset includes 41 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051627-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25592/uhhfdm.12340
title: An Interview About Charms And Prediction (NCAC_RDD_TAPE_0781A_B)

description: Charms
 Prediction


<em><sup>Alternative names: Alhagie, Alhagi, Nfamara, Mfamara, Oumar, Omar, Bojang, Sirifo, Sherifo, Sherriffo, Sherrifo, Shirifu</sup></em>
description: Published by NCAC - National Digital Archive of The Gambia, initiated by University of Hamburg, Asia-Africa-Institute, Germany, funded by Gerda Henkel Foundation, Germany
DOI: 10.25592/uhhfdm.12339
title: An Interview About Charms And Prediction (NCAC_RDD_TAPE_0781A_B)

description: Charms
 Prediction


<em><sup>Alternative names: Alhagie, Alhagi, Nfamara, Mfamara, Oumar, Omar, Bojang, Sirifo, Sherifo, Sherriffo, Sherrifo, Shirifu</sup></em>
description: Published by NCAC - National Digital Archive of The Gambia, initiated by University of Hamburg, Asia-Africa-Institute, Germany, funded by Gerda Henkel Foundation, Germany
DOI: 10.15468/dl.ypwxwm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lobelia patula L.f.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.6306 -23.844,35.6007 -23.8125,35.6007 -24.0157,35.6306 -23.844))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051626-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.14888728
title: Codebox Taguette - Turnover Staff Interview - Thematic Analysis

description: Codebook e Proyecto exportados del software Taguette;



Título del Proyecto en Taguette sítio web:



Análisis de las estrategias de retención y factores que impactan la rotación de profesionales de tecnología en la transformación digital.



Descripción del Proyecto:



Análisis de las estrategias de retención y los factores que impactan la rotación de profesionales de tecnología en la transformación digital.




📁 2025-06-17_Retencin y Rotacin en la Transformacin Digital.sqlite3





Tipo: Archivo de base de datos SQLite.




Función: Es el archivo principal del proyecto en Taguette. Contiene todos los documentos cargados, los fragmentos codificados (resaltados), los códigos aplicados y cualquier anotación o metadato. Todo el trabajo realizado en el proyecto se guarda aquí.



🧾 codebook.qdc





Tipo: Formato interno de código de Taguette.




Función: Representa el libro de códigos exportado desde el proyecto. Contiene los nombres de los códigos, descripciones y colores si se asignaron. Es útil para compartir o reutilizar códigos en otros proyectos.



🌐 codebook.html





Tipo: Documento HTML (página web).




Función: Versión visual del libro de códigos. Puedes abrirlo en un navegador para ver todos los códigos organizados de forma clara, ideal para revisión o presentación.



📄 codebook.csv





Tipo: Archivo de texto separado por comas (formato tabla).




Función: Versión del libro de códigos en formato CSV, compatible con Excel, Google Sheets y otros programas. Muy útil para análisis externos o respaldo.



📊 codebook.xlsx





Tipo: Archivo de Excel.




Función: Igual que el .csv, pero en un formato más completo y visual, con posibilidad de incluir colores, estilos y descripciones de manera más organizada.



📄 codebook.docx





Tipo: Documento Word.




Función: Versión del libro de códigos en formato docx, ideal para incorporar en informes, tesis o artículos científicos. Es editable y puede incluir encabezados, descripciones y formato de texto enriquecido.
DOI: 10.5281/zenodo.15684341
title: Codebox Taguette - Turnover Staff Interview - Thematic Analysis

description: Codebook e Proyecto exportados del software Taguette;



Título del Proyecto en Taguette sítio web:



Análisis de las estrategias de retención y factores que impactan la rotación de profesionales de tecnología en la transformación digital.



Descripción del Proyecto:



Análisis de las estrategias de retención y los factores que impactan la rotación de profesionales de tecnología en la transformación digital.




📁 2025-06-17_Retencin y Rotacin en la Transformacin Digital.sqlite3





Tipo: Archivo de base de datos SQLite.




Función: Es el archivo principal del proyecto en Taguette. Contiene todos los documentos cargados, los fragmentos codificados (resaltados), los códigos aplicados y cualquier anotación o metadato. Todo el trabajo realizado en el proyecto se guarda aquí.



🧾 codebook.qdc





Tipo: Formato interno de código de Taguette.




Función: Representa el libro de códigos exportado desde el proyecto. Contiene los nombres de los códigos, descripciones y colores si se asignaron. Es útil para compartir o reutilizar códigos en otros proyectos.



🌐 codebook.html





Tipo: Documento HTML (página web).




Función: Versión visual del libro de códigos. Puedes abrirlo en un navegador para ver todos los códigos organizados de forma clara, ideal para revisión o presentación.



📄 codebook.csv





Tipo: Archivo de texto separado por comas (formato tabla).




Función: Versión del libro de códigos en formato CSV, compatible con Excel, Google Sheets y otros programas. Muy útil para análisis externos o respaldo.



📊 codebook.xlsx





Tipo: Archivo de Excel.




Función: Igual que el .csv, pero en un formato más completo y visual, con posibilidad de incluir colores, estilos y descripciones de manera más organizada.



📄 codebook.docx





Tipo: Documento Word.




Función: Versión del libro de códigos en formato docx, ideal para incorporar en informes, tesis o artículos científicos. Es editable y puede incluir encabezados, descripciones y formato de texto enriquecido.
DOI: 10.34740/kaggle/dsv/12197779
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.yj2z9b
title: Occurrence Download

description: A dataset containing 459998 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lemna gibba L., Lemna minor L., Lemna trisulca L., Myriophyllum spicatum L., Nuphar ×spenneriana Gaudin)",
 "Geometry POLYGON ((-180 45.53015, 180 45.53015, 180 83.62313, -180 83.62313, -180 45.53015))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "CoordinateUncertaintyInMeters is less than or equal to 50000"
 ]
}

 The dataset includes 459998 records from 887 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051613-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4wh8hq
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eriolaena linearifolia (Hochr.) Dorr"
 ]
}

 The dataset includes 55 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043636-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1mqvyd
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Citrus ×aurantium var. myrtifolia (Risso) Ker Gawl."
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006375-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5xcrqf
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "Issue is Geodetic datum assumed WGS84",
 "OccurrenceStatus is Present",
 "TaxonKey is Bombus dahlbomii Guérin-Méneville, 1835",
 "Year 1000-2005"
 ]
}

 The dataset includes 220 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248060-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3met67
title: Occurrence Download

description: A dataset containing 8506 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Rissa brevirostris (Bruch, 1855)"
 ]
}

 The dataset includes 8506 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056036-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pcauqa
title: Occurrence Download

description: A dataset containing 1497 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-73.16482543945311 6.6441469701177525, -73.22113037109375 6.582760097407956, -73.16619873046875 6.489983332670651, -73.10989379882811 6.488618840362275, -73.05084228515625 6.524094436999696, -73.00277709960938 6.5895812371657, -73.01788330078125 6.631870206172686, -73.07693481445312 6.670063575977283, -73.16482543945311 6.6441469701177525))",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 1497 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006375-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bz57qw
title: Occurrence Download

description: A dataset containing 7590 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Khaya A.Juss."
 ]
}

 The dataset includes 7590 records from 204 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049335-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d5tnqx
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Argostemma laeve Benn."
 ]
}

 The dataset includes 42 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014609-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.53aswn
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Metapenaeus brevicornis (H.Milne Edwards, 1837)"
 ]
}

 The dataset includes 115 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0124410-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.