cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rnjjkz
title: Occurrence Download

description: A dataset containing 3525 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Countryside Council for Wales - Important Welsh Bat Roosts Database (BATSITES-WALES)"
 ]
}

 The dataset includes 3525 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004416-150811131857512/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hyf3uz
title: Occurrence Download

description: A dataset containing 4232 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Nicotiana tabacum L."
 ]
}

 The dataset includes 4232 records from 267 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055023-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t52zeb
title: Occurrence Download

description: A dataset containing 167 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Callistephus chinensis (L.) Nees"
 ]
}

 The dataset includes 167 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0289234-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a2uska
title: Occurrence Download

description: A dataset containing 69008 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-39.5 -27.5,-39.5 -35.5,-27.5 -35.5,-27.5 -27.5,-39.5 -27.5))"
 ]
}

 The dataset includes 69008 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004540-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t7rnaz
title: Occurrence Download

description: A dataset containing 64971 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Indigofera",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 64971 records from 258 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016791-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bua8aj
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Campanula scutellata"
 ]
}

 The dataset includes 140 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016838-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.553454
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio eremophilus"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016839-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fdmjvk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crupina vulgaris",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016840-250827131500795/datasets/export for details.
DOI: 10.15468/dl.mvx8gj
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crupina vulgaris",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016841-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pwmm3y
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crupina vulgaris",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016842-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwxw3w
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vincetoxicum purpurascens"
 ]
}

 The dataset includes 61 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016844-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgctjg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Semiplotus cirrhosus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016843-250827131500795/datasets/export for details.
DOI: 10.15468/dl.fpymr3
title: Occurrence Download

description: A dataset containing 606 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leobordea platycarpa",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 606 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016845-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rxrphp
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio eremophilus"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016846-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4r54ku
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crupina vulgaris",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 170 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016847-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9rwsqk
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fumaria judaica amarysia"
 ]
}

 The dataset includes 38 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016848-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fqn7yg
title: Occurrence Download

description: A dataset containing 450 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limeum aethiopicum",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 450 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016849-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30020866
title: ZWINT Interactome Exploration: Supporting Data for a Novel AI-Integrated PPI Workflow

description: <b>Introduction: </b>ZWINT (ZW10 Interactor) is known conventionally for its part in kinetochore movement during mitosis; however, it has also been implicated in neuropathic pain pathways, making its interactome a growing region of interest. Given the limited number of known Zwint PPIs within neurons, a substantial amount of real-world validation would need to be performed. Our goal with this study was to develop a workflow using various in-silico tools, including the AI protein folding "AlphaFold", that would allow for the development and prioritization of PPIs through computational triage. The associated short communication describes this novel methodology, with this data serving as proof-of-concept evidence. <b>Selected Proteins: </b>A total of seven proteins were tested to see how well they might bind to ZWINT. Three of these were known interactors determined through a mass spectrometry experiment, as characterized on ZWINT's Biogrid page. These interactors served as positive controls and were as follows: SNAP25CAMK2AUBCThe four remaining proteins were selected due to their proximity to ZWINT, including having known interactions with proteins already interacting with ZWINT. VCP, interacts with UBCARC, interacts with CAMK2ASTX1A, interacts with SNAP25BLOC1S2, implicated in the same neuropathic pain study as ZWINT <br><b>Methodology:</b>This dataset supports the development of a two-pathway workflow to prioritize specific PPIs. The approach combines a precision arm where dimers are created by AlphaFold and RoseTTAFold before their similarity is assessed by superimposing them in TM-Align. The AlphaFold structure with the highest similarity to the RoseTTAfold structure is then used for the binding arm of the study, where the interface of the protein complex is determined via a specialized "interface residues" command in the software "Open Source PyMOL". Following this, the structure and residue numbers are input into HADDOCK to get a HADDOCK score, where a lower score correlates to higher binding potential. <b>Disclaimer: </b>This process is not intended to use AI to replace real-world research. Rather, it is meant to triage already existing PPI candidates or give ideas for preliminary results that can be used in hypothesis generation before confirming with real-world experimentation. Note that the exploratory candidates here have NOT yet been experimented with in a real-world setting, and instead were created to see how their TM scores and HADDOCK scores fared compared to the positive controls.
DOI: 10.6084/m9.figshare.30020866.v1
title: ZWINT Interactome Exploration: Supporting Data for a Novel AI-Integrated PPI Workflow

description: <b>Introduction: </b>ZWINT (ZW10 Interactor) is known conventionally for its part in kinetochore movement during mitosis; however, it has also been implicated in neuropathic pain pathways, making its interactome a growing region of interest. Given the limited number of known Zwint PPIs within neurons, a substantial amount of real-world validation would need to be performed. Our goal with this study was to develop a workflow using various in-silico tools, including the AI protein folding "AlphaFold", that would allow for the development and prioritization of PPIs through computational triage. The associated short communication describes this novel methodology, with this data serving as proof-of-concept evidence. <b>Selected Proteins: </b>A total of seven proteins were tested to see how well they might bind to ZWINT. Three of these were known interactors determined through a mass spectrometry experiment, as characterized on ZWINT's Biogrid page. These interactors served as positive controls and were as follows: SNAP25CAMK2AUBCThe four remaining proteins were selected due to their proximity to ZWINT, including having known interactions with proteins already interacting with ZWINT. VCP, interacts with UBCARC, interacts with CAMK2ASTX1A, interacts with SNAP25BLOC1S2, implicated in the same neuropathic pain study as ZWINT <br><b>Methodology:</b>This dataset supports the development of a two-pathway workflow to prioritize specific PPIs. The approach combines a precision arm where dimers are created by AlphaFold and RoseTTAFold before their similarity is assessed by superimposing them in TM-Align. The AlphaFold structure with the highest similarity to the RoseTTAfold structure is then used for the binding arm of the study, where the interface of the protein complex is determined via a specialized "interface residues" command in the software "Open Source PyMOL". Following this, the structure and residue numbers are input into HADDOCK to get a HADDOCK score, where a lower score correlates to higher binding potential. <b>Disclaimer: </b>This process is not intended to use AI to replace real-world research. Rather, it is meant to triage already existing PPI candidates or give ideas for preliminary results that can be used in hypothesis generation before confirming with real-world experimentation. Note that the exploratory candidates here have NOT yet been experimented with in a real-world setting, and instead were created to see how their TM scores and HADDOCK scores fared compared to the positive controls.
DOI: 10.15468/dl.b8bnfa
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trematocara nigrifrons)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016850-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g4ctt6
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio xerophilus deserticola"
 ]
}

 The dataset includes 8 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016851-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gdwx98
title: Occurrence Download

description: A dataset containing 1450 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anthriscus nitidus"
 ]
}

 The dataset includes 1450 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016852-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8cgsdk
title: Occurrence Download

description: A dataset containing 17213555 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anas platyrhynchos",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-6.6 29.26705, -6.6 50.94, 40.81373 50.94, 40.81373 29.26705, -6.6 29.26705))",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Material sample)"
 ]
}

 The dataset includes 17213555 records from 157 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016769-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eerynf
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Russian Federation",
 "TaxonKey is Popillia japonica"
 ]
}

 The dataset includes 105 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016853-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30025186
title: Data and code for “Bedrock lithology determines forest demographic responses to drought”

description: This dataset supports the manuscript <i>“Bedrock lithology determines forest demographic responses to drought”</i> (submitted to <i>Nature Communications</i>).<br>It includes tree-ring records (COFECHA, ARSTAN processed), drought indices (Rt, Rc, Rs, rRs), satellite-derived regolith water loss rate (RWLR), stable isotope data (δ¹³C), and site-level covariates. R scripts for RWLR calculation, drought response analyses, and statistical modeling (LME, BRT) are provided, along with example input/output files for reproducibility. Data and code are shared under a CC-BY 4.0 license.
DOI: 10.6084/m9.figshare.30025186.v1
title: Data and code for “Bedrock lithology determines forest demographic responses to drought”

description: This dataset supports the manuscript <i>“Bedrock lithology determines forest demographic responses to drought”</i> (submitted to <i>Nature Communications</i>).<br>It includes tree-ring records (COFECHA, ARSTAN processed), drought indices (Rt, Rc, Rs, rRs), satellite-derived regolith water loss rate (RWLR), stable isotope data (δ¹³C), and site-level covariates. R scripts for RWLR calculation, drought response analyses, and statistical modeling (LME, BRT) are provided, along with example input/output files for reproducibility. Data and code are shared under a CC-BY 4.0 license.
DOI: 10.15468/dl.y8fnzh
title: Occurrence Download

description: A dataset containing 189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dimorphotheca pluvialis",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 189 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016854-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3n2huh
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dimorphotheca pluvialis",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016855-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qvdyrb
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dimorphotheca pluvialis",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 22 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016856-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.73jh3n
title: Occurrence Download

description: A dataset containing 189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lotononis falcata",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 189 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016857-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aqj5fq
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boechera angustifolia"
 ]
}

 The dataset includes 21 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016858-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wp4zy3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Benthophilus abdurahmanovi)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016859-250827131500795/datasets/export for details.
DOI: 10.15468/dl.hdvghn
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dimorphotheca sinuata",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 30 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016864-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rcn4ha
title: Occurrence Download

description: A dataset containing 29220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Barbarea stricta"
 ]
}

 The dataset includes 29220 records from 245 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016861-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mhzn9
title: Occurrence Download

description: A dataset containing 16802 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micranthes virginiensis"
 ]
}

 The dataset includes 16802 records from 217 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016860-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ewmasp
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Russian Federation",
 "TaxonKey is Popillia japonica"
 ]
}

 The dataset includes 105 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016862-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.