cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/bvx47zg5mt.1
title: Sensory-to-category transformation via dynamic reorganization of ensemble structures in mouse auditory cortex. Xin et al

description: Dataset for the study by Xin et al., "Sensory-to-category transformation via dynamic reorganization of ensemble structures in mouse auditory cortex." 1. The folder "Behavior Dataset for Figure 1" contains the behavioral data that can be used to reproduce the results in Figure 1 2. The folder "Dataset for Figures 2, 4, 6, 7, 8" contains 21 sessions calcium imaging data acquired during behavioral task. All the raw data are included in the folder and each session was saved as a separate file. Please refer to the note before data loading. 3. The folder "Dataset for Figure 3" contains calcium imaging data that can be used to reproduce the results in Figure 3. 4. The folder "Dataset for Figure 5" contains calcium imaging data that can be used to reproduce the results in Figure 5, which shows results of the experiments with two different behavior contexts. The subfolder "4_16Sess" contains data for the 4-16kHz imaging sessions. The subfolder "7_28Sess" contains data for for 7-28kHz imaging session. Files within different folders but sharing same file names (e.g. "Sess1_data_save.mat" contains data from session 1) are for the same imaging field of view.
DOI: 10.17632/yc7rgsm4hh.1
title: Data for: A Late Miocene terrestrial temperature history for the northeastern Tibetan Plateau’s period of tectonic expansion

description: The fractional abundance, proxies of branched GDGTs, and calculated MAT and pH in a Late Miocene sedimentary sequence from Xining Basin, northeastern Tibetan Plateau.
DOI: 10.17632/424pbvfyky.3
title: Data for: Temperature-dependence of a Raman CO2 densimeter

description: Worksheets named as "Supplemental Tables 1 and 2" are data obtained from our experiments. Worksheets named as "Data used in Fig. 1-8" are data and calculation processes required to draw the figures. Worksheets named as "Eq. (2) and Eq. (3)" show the results of error analysis.
DOI: 10.17632/8t9w9hydnm.2
title: Schistosomiasis: Life Cycle, Diagnosis, and Controle

description: Human schistosomiasis is a parasitic disease caused by blood-worms that infect multiple organs, including the liver, intestine, bladder, and urethra. The life cycle of these parasites involves two hosts: snails and mammals. Five species can infect humans. The three most common are S. haematobium, S. japonicum, and S. mansoni. Detection tools for people with schistosomiasis can include Kato-Katz and PCR. Praziquantel is at present the only effective treatment of this disease. In the future, vaccination or gene therapy may be used. Gene therapy research has attracted increasing interest researchers for treatment of schistosomiasis.
DOI: 10.18716/nmrshiftdb2/2261
title: NMR data for (-)-4-epi-Marsupellol acetate
DOI: 10.18716/nmrshiftdb2/2266
title: NMR data for 2-Chloro-7-hydroxy-3-methoxy-1,9-dimethyldibenzofuran
DOI: 10.5281/zenodo.3273298
title: Artifacts: An Approach for Reviewing Security Related Apects in Agile Requirements Specifications of Web Applications

description: Abstract—Defects in requirements specifications can have severe consequences during the software development lifecycle. Some of them result in overall project failure due to incorrect or missing quality characteristics. Security is one of those uality characteristics that need to be considered in early phases. There are several concerns that make security difficult to deal with; for instance, (1) when stakeholders discuss general requirements in (review) meetings, they are often not aware that they should also discuss security-related topics, and in the rather rare cases they are aware (2), they typically do not have sufficient security expertise. This picture is even more challenging in agile development contexts, where lightweight documentation are typically involved. To address these issues, we designed an approach that considers user stories and security specifications as input and relates those user stories to security properties via Natural Language Processing (NLP) techniques. Based on the related security properties, our approach then identifies high-level security requirements from the Open Web Application Security Project (OWASP) to be verified afterwards. In a last step, the verification of the generated security requirements is then conducted via a focused reading technique. We finally validate our approach via a controlled experiment comparing the effectiveness and efficiency of novice inspectors (we used two different groups of students) verifying security aspects in agile requirements using our generated reading techniques against using the complete list of OWASP high level security requirements and a the same list of defect types embedded in our technique. The (statistically significant) results indicate that using the reading technique has a positive impact (with large effect size) on the performance of inspectors in terms of effectiveness and efficiency. This repository also contains: Artifacts used and results of the experimental study of the paper entitled "An Approach for Reviewing Security Related Apects in Agile Requirements Specifications of Web Applications".
DOI: 10.17632/8sj5wwf5c6.1
title: Comparative transcriptome analyses on brain and liver of Eriocheir sinensis under reproduction

description: This dataset provides differentially expressed genes in brain and liver of male and female Eriocheir sinensis under reproduction.
DOI: 10.17632/h97twgph6y.1
title: Kinetics of Hydrochloric Acid Leaching Al3+ from Montmorillonites

description: The components of purified samples were examined by means of X ray diffraction (XRD) and FTIR. XRD was performed on unorientated samples with an Ultima IV diffractometer, operating at 40 kV and 40mA, using Ni-filtered CuK α radiation, at a scanning speed of 8°2θ/min. FT-IR spectra were obtained using a Nicolet 380 FTIR Spectrometer. 3 mg of each sample previously dried at 110°C for 3 hours were mixed with 160 mg of KBr and pressed on disks. The particle-size distribution of the purified sample was determined by Bettersize BT-9300Z laser particle analyzer. A complete chemical analysis of the purified samples was performed by use of China's Nation Standard GB/T 16399-1996 and GB/T 14506.28-2010. Select Al3+ as the structure cations leaching objective to learn the cationic leaching kinetics on acid leaching montmorillonite. Acid leaching were carried out in a 250 mL three-neck flask which was soaked in a constant temperature oil bath to heat. A mechanical stirring rod, a thermometer and a condensing tube were inserted in the flask through the three necks, respectively. For each run, the solution was freshly mixed by 100 mL distilled water and 20 mL 37% analytical grade hydrochloric acid in the three-neck flask and stirred at a fixed rate of 300 r/min. When the temperature was reached, put 4 g sample into the flask through one neck and start to clock. The liquid-solid mixture was heated at 47, 67, 87 and 97℃ respectively, for different period time between 1 hour and 45 hour. After the designed leaching time, the mixtures were centrifuged immediately. Precipitation was washed by deionized water repeatedly until without Cl- tested by AgNO3 liquid drop. After drying, grinding solid product to -200 mesh (-75μm). The constant volume of filtrate and lotion were used to determine the leaching amount of Al3+ from montmorillonite by China's mechanical industry Standard B/T9225 - 1999. According to the total chemical analysis of Al3+ and the content of Al3+ in the leaching solution, the leaching ratio of Al3+ XB at different time was calculated, and a variety of dynamic model of liquid-solid reaction was fitted. There are two type models commonly used in literature for liquid-solid reaction: Shrinking-Core Model (SCM), also called interfacial reaction models, and Progressive-Conversion Model (PCM), also called capacity model. All fitting figures are drawn with ORIGIN software.
DOI: 10.18716/nmrshiftdb2/2270
title: NMR data for Kuhistanicaol J
DOI: 10.5281/zenodo.3270866
title: ODO1 regulates the timing of internal volatile production in Petunia hybrida, and possibly influences the volatile composition.

description: Data Repository Bachelor Thesis Nina Borsboom. To attract the right pollinators, <em>Petunia hybrida </em>emits its floral fragrance at night. The temporal emission of fragrance is regulated by transcription factors such as EMISSION OF BENZENOIDS I & II (EOBI & EOBII) and ODORANT1 (ODO1). The timed expression of <em>ODO1</em>, determines the timing of volatile emission. The expression of <em>ODO1</em> is negatively regulated by LATE ELONGATED HYPOCOTYL (LHY). LHY represses <em>ODO1</em> transcription by binding to ‘evening elements’ (EEs) in the promoter region of <em>ODO1</em>. In this study the effect of ODO1 on the production of internal volatiles and the volatile composition is researched by determining the gene expression levels of <em>ODO1</em>, <em>EPSPS1</em>, and <em>PAL1</em>. The start of the production of internal volatile compounds in different lines was also determined with a GC-MS. The used transgenic lines of <em>P. hybrida</em> contained <em>ODO1 </em>constructs with either no functional EEs, one functional EE or both functional EEs in the <em>ODO1</em> promoter region. <em>ODO1</em> is significantly earlier upregulated in lines with mutations in both EEs, which correlates with earlier production of internal volatiles when compared to wild type <em>P. hybrida</em>. Small changes in the composition of the internal volatiles were also observed.
DOI: 10.5281/zenodo.3270867
title: ODO1 regulates the timing of internal volatile production in Petunia hybrida, and possibly influences the volatile composition.

description: Data Repository Bachelor Thesis Nina Borsboom. To attract the right pollinators, <em>Petunia hybrida </em>emits its floral fragrance at night. The temporal emission of fragrance is regulated by transcription factors such as EMISSION OF BENZENOIDS I & II (EOBI & EOBII) and ODORANT1 (ODO1). The timed expression of <em>ODO1</em>, determines the timing of volatile emission. The expression of <em>ODO1</em> is negatively regulated by LATE ELONGATED HYPOCOTYL (LHY). LHY represses <em>ODO1</em> transcription by binding to ‘evening elements’ (EEs) in the promoter region of <em>ODO1</em>. In this study the effect of ODO1 on the production of internal volatiles and the volatile composition is researched by determining the gene expression levels of <em>ODO1</em>, <em>EPSPS1</em>, and <em>PAL1</em>. The start of the production of internal volatile compounds in different lines was also determined with a GC-MS. The used transgenic lines of <em>P. hybrida</em> contained <em>ODO1 </em>constructs with either no functional EEs, one functional EE or both functional EEs in the <em>ODO1</em> promoter region. <em>ODO1</em> is significantly earlier upregulated in lines with mutations in both EEs, which correlates with earlier production of internal volatiles when compared to wild type <em>P. hybrida</em>. Small changes in the composition of the internal volatiles were also observed.
DOI: 10.17632/7hj28bmfxz.13
title: Data for: On The Radon--Nikodym Spectral Approach With Optimal Clustering.

description: This is the code to accompany the paper "On The Radon--Nikodym Spectral Approach With Optimal Clustering". This is a software implementing the algorithms of interpolation, classification, and optimal clustering based on the Lebesgue quadrature technique. Whereas in a Bayesian approach new observations change only outcome probabilities, in the Radon-Nikodym approach not only outcome probabilities but also the probability space change with new observations. This is a remarkable feature of the approach: both the probabilities and the probability space are constructed from the data. A regular PCA variation expansion depends on attributes normalizing. The PCA variation expansion in the Lebesgue quadrature basis is unique thus does not depend on attributes scale, moreover it is invariant relatively any non-degenerated linear transform of input vector components.
DOI: 10.17632/stxrv6x98g.1
title: NPGPx-mediated adaptation to oxidative stress protects motor neuron from degeneration in aging by directly modulating O-GlcNAcase

description: Tiff files for Western blots
DOI: 10.17632/stxrv6x98g.2
title: NPGPx-mediated adaptation to oxidative stress protects motor neuron from degeneration in aging by directly modulating O-GlcNAcase

description: Tiff files for Western blots
DOI: 10.17632/29b5dzk6tf.1
title: Effects of Defects on Laminate Quality and Mechanical Performance in Thermoplastic Automated Fiber Placement-based Process Chains

description: The corresponding paper (open-access gold) investigates the effects of process specific defects on the laminate quality and mechanical performance for the Thermoplastic Automated Fiber Placement process. The data provided contains the raw data from the testing machine for both compression and tensile testing. For the latter, the export of the ARAMIS strain concantration measurements is provided as well. Within all data sets, the specimens are refered to with the same nomenclature that is used in the paper. Each parameter set is addressed by XX-Y-Z-S, where XX is the consolidation process, Y is the stacking sequence, Z is the type of defect and S is the defects size. Each testing machine data file contains all five specimen tested as seperate tab. The tabe are named with an internal testing number followed by the specimen index. The ARAMIS strain data is only provieded for the specimen that was considered for the plot and image generation. The authors did ensure that the selected specimen is representative for the corresponding group by subjective comparison of the strain measurements and plots.
DOI: 10.17632/h97twgph6y.2
title: Kinetics of Hydrochloric Acid Leaching Al3+ from Montmorillonites

description: The components of purified samples were examined by means of X ray diffraction (XRD) and FTIR. XRD was performed on unorientated samples with an Ultima IV diffractometer, operating at 40 kV and 40mA, using Ni-filtered CuK α radiation, at a scanning speed of 8°2θ/min. FT-IR spectra were obtained using a Nicolet 380 FTIR Spectrometer. 3 mg of each sample previously dried at 110°C for 3 hours were mixed with 160 mg of KBr and pressed on disks. The particle-size distribution of the purified sample was determined by Bettersize BT-9300Z laser particle analyzer. A complete chemical analysis of the purified samples was performed by use of China's Nation Standard GB/T 16399-1996 and GB/T 14506.28-2010. Select Al3+ as the structure cations leaching objective to learn the cationic leaching kinetics on acid leaching montmorillonite. Acid leaching were carried out in a 250 mL three-neck flask which was soaked in a constant temperature oil bath to heat. A mechanical stirring rod, a thermometer and a condensing tube were inserted in the flask through the three necks, respectively. For each run, the solution was freshly mixed by 100 mL distilled water and 20 mL 37% analytical grade hydrochloric acid in the three-neck flask and stirred at a fixed rate of 300 r/min. When the temperature was reached, put 4 g sample into the flask through one neck and start to clock. The liquid-solid mixture was heated at 47, 67, 87 and 97℃ respectively, for different period time between 1 hour and 45 hour. After the designed leaching time, the mixtures were centrifuged immediately. Precipitation was washed by deionized water repeatedly until without Cl- tested by AgNO3 liquid drop. After drying, grinding solid product to -200 mesh (-75μm). The constant volume of filtrate and lotion were used to determine the leaching amount of Al3+ from montmorillonite by China's mechanical industry Standard B/T9225 - 1999. According to the total chemical analysis of Al3+ and the content of Al3+ in the leaching solution, the leaching ratio of Al3+ XB at different time was calculated, and a variety of dynamic model of liquid-solid reaction was fitted. There are two type models commonly used in literature for liquid-solid reaction: Shrinking-Core Model (SCM), also called interfacial reaction models, and Progressive-Conversion Model (PCM), also called capacity model. All fitting figures are drawn with ORIGIN software.
DOI: 10.17632/h97twgph6y.3
title: Kinetics of Hydrochloric Acid Leaching Al3+ from Montmorillonites

description: The components of purified samples were examined by means of X ray diffraction (XRD) and FTIR. XRD was performed on unorientated samples with an Ultima IV diffractometer, operating at 40 kV and 40mA, using Ni-filtered CuK α radiation, at a scanning speed of 8°2θ/min. FT-IR spectra were obtained using a Nicolet 380 FTIR Spectrometer. 3 mg of each sample previously dried at 110°C for 3 hours were mixed with 160 mg of KBr and pressed on disks. The particle-size distribution of the purified sample was determined by Bettersize BT-9300Z laser particle analyzer. A complete chemical analysis of the purified samples was performed by use of China's Nation Standard GB/T 16399-1996 and GB/T 14506.28-2010. Select Al3+ as the structure cations leaching objective to learn the cationic leaching kinetics on acid leaching montmorillonite. Acid leaching were carried out in a 250 mL three-neck flask which was soaked in a constant temperature oil bath to heat. A mechanical stirring rod, a thermometer and a condensing tube were inserted in the flask through the three necks, respectively. For each run, the solution was freshly mixed by 100 mL distilled water and 20 mL 37% analytical grade hydrochloric acid in the three-neck flask and stirred at a fixed rate of 300 r/min. When the temperature was reached, put 4 g sample into the flask through one neck and start to clock. The liquid-solid mixture was heated at 47, 67, 87 and 97℃ respectively, for different period time between 1 hour and 45 hour. After the designed leaching time, the mixtures were centrifuged immediately. Precipitation was washed by deionized water repeatedly until without Cl- tested by AgNO3 liquid drop. After drying, grinding solid product to -200 mesh (-75μm). The constant volume of filtrate and lotion were used to determine the leaching amount of Al3+ from montmorillonite by China's mechanical industry Standard B/T9225 - 1999. According to the total chemical analysis of Al3+ and the content of Al3+ in the leaching solution, the leaching ratio of Al3+ XB at different time was calculated, and a variety of dynamic model of liquid-solid reaction was fitted. There are two type models commonly used in literature for liquid-solid reaction: Shrinking-Core Model (SCM), also called interfacial reaction models, and Progressive-Conversion Model (PCM), also called capacity model. All fitting figures are drawn with ORIGIN software.
DOI: 10.18716/nmrshiftdb2/2268
title: NMR data for (2S,3R)-5-Hydroxy-6,8,10-trimethoxy-2,3-dimethyl-2,3-dihydro-4H-naphtho[2,3-b]-pyran-4-one
DOI: 10.17632/7y2bkycfhg.2
title: Data for: Fluvial response to climate change inferred from sediment cores from the Ghaggar–Hakra paleochannel in NW Indo–Gangetic plains

description: Depth-wise description of sediment characteristics and facies observed in sediment cores. This data was used for preparation of lithologs.
DOI: 10.17632/8j4y75f36v.2
title: Data for: Fluvial response to climate change inferred from sediment cores from the Ghaggar–Hakra paleochannel in NW Indo–Gangetic plains

description: Optically Stimulated Luminescence (OSL) age data used for chronology of fluvial deposits.
DOI: 10.18716/nmrshiftdb2/2269
title: NMR data for Kuhistanicaol I
DOI: 10.18716/nmrshiftdb2/2273
title: NMR data for (+)-(1R,5S,6S,7S)-5,6-Dimethyl-9-oxo-8-isopropylidene-tricyclo[5.2.2.0^(1,6)]undecane; (+)-7,10-Anhydro-11,12-dihydrochiloscypholone
DOI: 10.18716/nmrshiftdb2/2263
title: NMR data for (-)-6-(3,3-Dimethylallyl)-7-hydroxy-6''',6'''-dimethylchromeno-(4',3',2''',3''')-flavanone; Dinklagin A
DOI: 10.18716/nmrshiftdb2/2267
title: NMR data for 1,2-Epoxy-3,4,8,10-tetrahydroxyguaia-11(13)-en-12,6-olide
DOI: 10.5281/zenodo.3274707
title: Dataset of the journal article "Spatial Reuse in IEEE 802.11ax WLANs"

description: This dataset contains both the inputs and the outputs from the conference article "Spatial Reuse in IEEE 802.11ax WLANs", authored by Francesc Wilhelmi, Sergio Barrachina, Cristina Cano, Ioannis Selinis and Boris Bellalta. The article has been sent to IEEE Surveys & Tutorials. Regarding the Komondor's input, we provide the files used in the Komondor simulator, as well as the execution scripts, for generating the results presented in the paper. We find "toy" and "random" scenarios, which cover different parts of the paper. In the random case, we have 39,800 different scenarios, which correspond to 4 network densities, 3 strategies on applying SR, 3 traffic loads, 50 deployments, and 21 different OBSS/PD values. More details are provided in the article. Apart from the Komondor's input, we also provide other Matlab files used in the context of the SFCTMN analytical model (refer to https://github.com/sergiobarra/SFCTMN/releases/tag/v1.0_11ax_SR). Contact information: francisco.wilhelmi@upf.edu
DOI: 10.5281/zenodo.3274708
title: Dataset of the journal article "Spatial Reuse in IEEE 802.11ax WLANs"

description: This dataset contains both the inputs and the outputs from the conference article "Spatial Reuse in IEEE 802.11ax WLANs", authored by Francesc Wilhelmi, Sergio Barrachina, Cristina Cano, Ioannis Selinis and Boris Bellalta. The article has been sent to IEEE Surveys & Tutorials. Regarding the Komondor's input, we provide the files used in the Komondor simulator, as well as the execution scripts, for generating the results presented in the paper. We find "toy" and "random" scenarios, which cover different parts of the paper. In the random case, we have 39,800 different scenarios, which correspond to 4 network densities, 3 strategies on applying SR, 3 traffic loads, 50 deployments, and 21 different OBSS/PD values. More details are provided in the article. Apart from the Komondor's input, we also provide other Matlab files used in the context of the SFCTMN analytical model (refer to https://github.com/sergiobarra/SFCTMN/releases/tag/v1.0_11ax_SR). Contact information: francisco.wilhelmi@upf.edu
DOI: 10.18716/nmrshiftdb2/2264
title: NMR data for Unguisin C