cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/gnr6-j643
title: NBDL-HK3RC4EXHA7J3G
DOI: 10.25919/xmg6-1t18
title: NBDL-HK3RC4E1HA4JK0
DOI: 10.25919/84pr-wv37
title: NBDL-HK3R7JQ2P1JN0H
DOI: 10.25919/nsy1-4p06
title: NBDL-HK3RDJQ4H2EWKX
DOI: 10.6084/m9.figshare.25106168
title: Mouse neuron cell density tables and images

description: This dataset contains tables listing mouse neuron cell density of 3 cell types for 818 brain regions defined in the Allen institute ontology. It also includes cell density as a 3D image for 27 whole mouse brains.
DOI: 10.6084/m9.figshare.25106168.v1
title: Mouse neuron cell density tables and images

description: This dataset contains tables listing mouse neuron cell density of 3 cell types for 818 brain regions defined in the Allen institute ontology. It also includes cell density as a 3D image for 27 whole mouse brains.
DOI: 10.25919/sz3c-7t68
title: NBDL-HK3RDJSXM370JJ
DOI: 10.25919/wg2c-6k31
title: NBDL-HK3RDJQ9K2ED5H
DOI: 10.25919/dry7-wb31
title: NBDL-HK3RC4DKMA0ZA5
DOI: 10.25919/fz54-jv62
title: NBDL-HK3RC4D8JA3EG1
DOI: 10.25919/v4mr-7a73
title: NBDL-HK3RC4CMJAEK8H
DOI: 10.15468/dl.xsxpmj
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((25.40359 35.46175,46.28396 35.46175,46.28396 41.64038,25.40359 41.64038,25.40359 35.46175))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salmo trutta"
 ]
}

 The dataset includes 73 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007180-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ynj9j
title: Occurrence Download

description: A dataset containing 3914 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heloderma suspectum"
 ]
}

 The dataset includes 3914 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007179-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25919/f6mv-cb63
title: NBDL-HK3RC4E4QA4TQC
DOI: 10.25919/m9qt-h110
title: NBDL-HK3RDJQMH213NX
DOI: 10.25919/6ya8-z033
title: NBDL-HK3R7JQTP1N9QH
DOI: 10.25919/q0ga-xt13
title: NBDL-HK3RC4CHGA1E3X
DOI: 10.25919/bvcn-dq69
title: NBDL-HK3R7JS5H140HY
DOI: 10.25919/t6y9-7k64
title: NBDL-HK3R7JR0K15A1J
DOI: 10.25919/x7b7-zy32
title: NBDL-HK3RC4DCJA0MBH
DOI: 10.15468/dl.nvezeb
title: Occurrence Download

description: A dataset containing 4346519 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ukraine",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4346519 records from 1730 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007155-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j9wkf3
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stomatogene",
 "HasCoordinate is true"
 ]
}

 The dataset includes 41 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004991-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17694493
title: MeshCoder Dataset (10k samples)

description: This dataset contains 10k code-to-3D-animation pairs from the MeshCoder project.

Each sample includes:



A Python script using Blender API to generate 3D meshes

A corresponding MP4 video showing the continuous rotation of the generated 3D object


File Structure:



dataset_10k.json: Metadata for all 10000 samples (IDs, names, categories, scripts)

meshcoder_batch_XXX.zip: Batches of code-mp4 pairs (each contains ~500 samples)



code/{sample_id}.py: Python scripts

mp4/{sample_id}_continuous.mp4: Rendered videos




Usage:



Download dataset_10k.json for metadata

Download the batch zip files you need

Extract zip files to get code/ and mp4/ folders

Files with the same ID correspond to each other (e.g., code/12345.py ↔ mp4/12345_continuous.mp4)


File Naming:



Code: {sample_id}.py

Video: {sample_id}_continuous.mp4
DOI: 10.5281/zenodo.17694494
title: MeshCoder Dataset (10k samples)

description: This dataset contains 10k code-to-3D-animation pairs from the MeshCoder project.

Each sample includes:



A Python script using Blender API to generate 3D meshes

A corresponding MP4 video showing the continuous rotation of the generated 3D object


File Structure:



dataset_10k.json: Metadata for all 10000 samples (IDs, names, categories, scripts)

meshcoder_batch_XXX.zip: Batches of code-mp4 pairs (each contains ~500 samples)



code/{sample_id}.py: Python scripts

mp4/{sample_id}_continuous.mp4: Rendered videos




Usage:



Download dataset_10k.json for metadata

Download the batch zip files you need

Extract zip files to get code/ and mp4/ folders

Files with the same ID correspond to each other (e.g., code/12345.py ↔ mp4/12345_continuous.mp4)


File Naming:



Code: {sample_id}.py

Video: {sample_id}_continuous.mp4
DOI: 10.15468/dl.rbgexh
title: Occurrence Download

description: A dataset containing 3765 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations)",
 "Geometry POLYGON(( -105.601802164238 35.5325227840993 , -105.2372292897 35.5325227840993 , -105.2372292897 36.1779250141282 , -105.601802164238 36.1779250141282 , -105.601802164238 35.5325227840993 ))",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 3765 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004992-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nhz55n
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Balladynocallia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004993-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30690182
title: ZO-1

description: NOR FD taVNS Gata3fl+taVNS
DOI: 10.6084/m9.figshare.30690182.v1
title: ZO-1

description: NOR FD taVNS Gata3fl+taVNS
DOI: 10.15468/dl.c998dn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pilgeriella",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004994-251120083545085/datasets/export for details.
DOI: 10.15468/dl.te8v6e
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is A checklist of amphibians at Lubuk Semilang Recreational Park, Langkawi Island, Kedah, Peninsular Malaysia"
 ]
}

 The dataset includes 81 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004995-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30413405
title: Additional file 1 of UAV-based multispectral image analysis revealed stay-green haplotypes in wheat specific for different soil nitrogen levels

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30413405.v1
title: Additional file 1 of UAV-based multispectral image analysis revealed stay-green haplotypes in wheat specific for different soil nitrogen levels

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30381440
title: Additional file 3 of Extracellular vesicle bioactivity and potential for clinical development are determined by mesenchymal stromal cell clonal subtype

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30381440.v1
title: Additional file 3 of Extracellular vesicle bioactivity and potential for clinical development are determined by mesenchymal stromal cell clonal subtype

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30690442
title: Additional file 1 of A novel algorithm- specific loci screening accelerates the establishment of molecular quantification of Glycyrrhiza glabra, G. uralensis, and G. inflata

description: Additional file 1.
DOI: 10.6084/m9.figshare.30690442.v1
title: Additional file 1 of A novel algorithm- specific loci screening accelerates the establishment of molecular quantification of Glycyrrhiza glabra, G. uralensis, and G. inflata

description: Additional file 1.
DOI: 10.6084/m9.figshare.30690448
title: Additional file 3 of A novel algorithm- specific loci screening accelerates the establishment of molecular quantification of Glycyrrhiza glabra, G. uralensis, and G. inflata

description: Additional file 3.
DOI: 10.6084/m9.figshare.30690448.v1
title: Additional file 3 of A novel algorithm- specific loci screening accelerates the establishment of molecular quantification of Glycyrrhiza glabra, G. uralensis, and G. inflata

description: Additional file 3.
DOI: 10.15468/dl.suf3qq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tretospora",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004996-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9epc5r
title: Occurrence Download

description: A dataset containing 1345 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations)",
 "Geometry POLYGON(( -108.095474693902 32.9357009349503 , -107.59123584296 32.9357009349503 , -107.59123584296 33.4497630797024 , -108.095474693902 33.4497630797024 , -108.095474693902 32.9357009349503 ))",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 1345 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004998-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzkx33
title: Occurrence Download

description: A dataset containing 49926 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Solanaceae"
 ]
}

 The dataset includes 49926 records from 573 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004997-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.63z8h5
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Duellmanohyla chamulae"
 ]
}

 The dataset includes 154 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005000-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jz6paw
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Balladynopsis",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005001-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30690428
title: 3h food intake

description: 3h food intake
DOI: 10.6084/m9.figshare.30690428.v1
title: 3h food intake

description: 3h food intake
DOI: 10.34740/kaggle/dsv/13845373
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.geusb6
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005003-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fktvhm
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mesniera",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005004-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgye4d
title: Occurrence Download

description: A dataset containing 9003 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations)",
 "Geometry POLYGON(( -111.568396190032 33.5865204795365 , -111.160158539385 33.5865204795365 , -111.160158539385 34.0352092994697 , -111.568396190032 34.0352092994697 , -111.568396190032 33.5865204795365 ))",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 9003 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005005-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.73456a
title: Occurrence Download

description: A dataset listing the 252 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Plant (KOBG_PL)"
 ]
}

 The dataset's 252 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004999-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17268223
title: Molecular Arms Race Classifier Training, Testing, Clustering, Docking, and Molecular Dynamics Simulation Dataset

description: This dataset contains all files, scripts, directories, and computational outputs generated for the Molecular Arms Race Classifier (MARC) project, including training, testing, predicted structures, clustering, docking, and molecular dynamics (MD) simulation data. The dataset supports reproducibility of the MARC classifier workflow and enables visualization and re-analysis of docking and MD-based orthogonal validation outputs.

The archive includes:

• Training, testing, and prediction datasets used to develop and evaluate the MARC ion-channel specificity classifier.• qTMclust structural clustering outputs (CSV files, processed cluster directories, and raw US-align qTMclust text output).• Docking results generated using Schrödinger PIPER protein–protein docking workflows.• Molecular dynamics simulation directories generated using Schrödinger Maestro’s Desmond engine, including full trajectory folders and job files.• System preparation and membrane-building files, including POPC membrane embedding and SPC solvation stages.• Protein preparation outputs (Schrödinger Protein Preparation Wizard) for all proteins used in docking and MD simulations.• Supporting scripts used for organizing qTMclust outputs, generating cluster directories, and processing MARC classification data.

This dataset accompanies the MARC manuscript and is provided to enable full transparency, re-analysis, and independent validation of the structural, biophysical, and machine learning components of the study. All files are organized to reflect the exact directory structure produced by the computational workflows.
DOI: 10.5281/zenodo.17268224
title: Molecular Arms Race Classifier Training, Testing, Clustering, Docking, and Molecular Dynamics Simulation Dataset

description: This dataset contains all files, scripts, directories, and computational outputs generated for the Molecular Arms Race Classifier (MARC) project, including training, testing, predicted structures, clustering, docking, and molecular dynamics (MD) simulation data. The dataset supports reproducibility of the MARC classifier workflow and enables visualization and re-analysis of docking and MD-based orthogonal validation outputs.

The archive includes:

• Training, testing, and prediction datasets used to develop and evaluate the MARC ion-channel specificity classifier.• qTMclust structural clustering outputs (CSV files, processed cluster directories, and raw US-align qTMclust text output).• Docking results generated using Schrödinger PIPER protein–protein docking workflows.• Molecular dynamics simulation directories generated using Schrödinger Maestro’s Desmond engine, including full trajectory folders and job files.• System preparation and membrane-building files, including POPC membrane embedding and SPC solvation stages.• Protein preparation outputs (Schrödinger Protein Preparation Wizard) for all proteins used in docking and MD simulations.• Supporting scripts used for organizing qTMclust outputs, generating cluster directories, and processing MARC classification data.

This dataset accompanies the MARC manuscript and is provided to enable full transparency, re-analysis, and independent validation of the structural, biophysical, and machine learning components of the study. All files are organized to reflect the exact directory structure produced by the computational workflows.
DOI: 10.15468/dl.cj42md
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Roeslerina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005006-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qg787j
title: Occurrence Download

description: A dataset containing 228112 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is e8eada63-4a33-44aa-b2fd-4f71efb222a0",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 228112 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005002-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vcc867
title: Occurrence Download

description: A dataset containing 59895 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-111.75639 33.22073,-111.68749 33.22056,-111.68702 33.25998,-111.75565 33.26002,-111.75639 33.22073))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 59895 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004982-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c79kqn
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Protoscypha",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005007-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5r8v4u
title: Occurrence Download

description: A dataset containing 2014 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Canada",
 "TaxonKey is Ambrosia artemisiifolia",
 "Year 2023-2025"
 ]
}

 The dataset includes 2014 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005008-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pmwzaw
title: Occurrence Download

description: A dataset containing 39143093 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 39143093 records from 4601 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004941-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d9c5vn
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((89.00022 24.531906, 88.923033 24.526329, 88.84776599999999 24.509736, 88.776292 24.482541, 88.710382 24.44542, 88.65167099999999 24.399294, 88.601606 24.345309, 88.56141599999999 24.284802, 88.53208100000001 24.219271, 88.51431100000001 24.150337, 88.50852399999999 24.0797, 88.514843 24.009101, 88.53309299999999 23.940277, 88.562809 23.874918, 88.60324300000001 23.814628, 88.65339299999999 23.760882, 88.71202 23.714997, 88.77768500000001 23.678092, 88.848778 23.651069, 88.923565 23.634587, 89.00022 23.629048, 89.076875 23.634587, 89.151662 23.651069, 89.22275500000001 23.678092, 89.28842 23.714997, 89.347047 23.760882, 89.39719700000001 23.814628, 89.437631 23.874918, 89.467347 23.940277, 89.485597 24.009101, 89.491916 24.0797, 89.48612900000001 24.150337, 89.46835900000001 24.219271, 89.439024 24.284802, 89.39883399999999 24.345309, 89.348769 24.399294, 89.290058 24.44542, 89.224148 24.482541, 89.152674 24.509736, 89.07740699999999 24.526329, 89.00022 24.531906))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005603-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.