cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12057951.v1
title: Dynamic change of lymphocyte count in COVID-19 patients

description: Lymphopenia is associated with COVID-19 severity. Herein we describe the dynamic changes in lymphocyte count during hospitalization and explore a possible association with the severity of COVID-19.In this retrospective study, 13 non-severe COVID-19 patients diagnosed at admission were enrolled. One patient progressed to severe disease. Dynamic changes in lymphocyte count and CT score of all patients were analyzed.
DOI: 10.6084/m9.figshare.12057939
title: Supplementary Material for: Correlation of World Health Organization 2010 Classification for Gastroenteropancreatic Neuroendocrine Neoplasms with the Prognosis of Ovarian Neuroendocrine Neoplasms: Kansai Clinical Oncology Group-Protocol Review Committee/Intergroup Study

description: <b><i>Background:</i></b> In 2014, the World Health Organization (WHO) released a classification system introducing neuroendocrine neoplasms (NENs) of the female reproductive tract, excluding the ovaries. This study aimed to evaluate whether retrospective adaption of the gastroenteropancreatic (GEP)-NEN classification is feasible for ovarian NENs (O-NENs) and correlates with prognosis. <b><i>Methods:</i></b> Sixty-eight patients diagnosed with carcinoid, small cell carcinoma (pulmonary type), paraganglioma, non-small/large cell neuroendocrine carcinoma (NEC), mixed NEC, or undifferentiated carcinomas at 20 institutions in Japan were included in this retrospective cross-sectional study. We identified O-NENs through central pathological review using a common slide set, followed by reclassification according to WHO 2010 guidelines for GEP-NENs. A proportional hazards model was used to assess the association of prognostic factors (age, stage, performance status, histology, and residual disease) with overall survival (OS) and progression-free survival (PFS). <b><i>Results:</i></b> Of the 68 enrolled patients, 48 were eligible for analysis. All carcinoids (<i>n</i> = 32) were reclassified as NET G1/G2, whereas 14 of 16 carcinomas were reclassified as NEC/mixed adeno-NEC (MANEC) (Fisher’s exact test; <i>p</i> &lt; 0.01). The OS/PFS was 49.0/42.5 months and 6.5/3.9 months for NET G1/G2 and NEC/MANEC, respectively. Histology revealed that NEC/MANEC was associated with increased risk of death (HR = 48.0; 95% CI, 3.93–586; <i>p</i> &lt; 0.01) and disease progression (HR = 51.6; 95% CI, 5.54–480; <i>p</i> &lt; 0.01). <b><i>Conclusion:</i></b> Retrospective adaption of GEP-NEN classification to O-NENs is feasible and correlates well with the prognosis of O-NENs. This classification could be introduced for ovarian tumors.
DOI: 10.6084/m9.figshare.12058065.v5
title: Solar wind in situ data suitable for machine learning (python numpy structured arrays): STEREO-A/B, Wind, Parker Solar Probe, Ulysses, Venus Express, MESSENGER

description: These are solar wind in situ data arrays in python pickle format suitable for machine learning, i.e. the arrays consist only of numbers, no strings and no datetime objects.<br><br>See AAREADME_insitu_ML.txt for more explanation.<br>If you use these data for peer reviewed scientific publications, please get in touch concerning usage and possible co-authorship by the authors (C. Möstl, A. J. Weiss, R. L. Bailey, A. Isavnin, D. Stansby): christian.moestl@oeaw.ac.at or twitter @chrisoutofspace <br>Made with https://github.com/cmoestl/heliocats <br><br>Load in python with e.g. for Parker Solar Probe data:<br>&gt; import pickle&gt; filepsp='psp_2018_2019_sceq_ndarray.p'&gt; [psp,hpsp]=pickle.load(open(filepsp, "rb" ) ) <br>plot time vs total field&gt; import matplotlib.pyplot as plt&gt; plt.plot(psp['time'],psp['bt'])<br><br>Times psp[:,0 ] or psp['time'] are in matplotlib format. Variable 'hpsp' contains a header with the variable names and units for each column. Coordinate systems for magnetic field components are RTN (Ulysses), SCEQ (Parker Solar Probe, STEREO-A/B, VEX, MESSENGER), HEEQ (Wind)<br>available parameters:<br>bt = total magnetic fieldbxyz = magnetic field componentsvt = total proton speedvxyz = velocity components (only for PSP)np = proton densitytp = proton temperaturexyz = spacecraft position in HEEQr, lat, lon = spherical coordinates of position in HEEQ<br><br><br><br>
DOI: 10.6084/m9.figshare.12057939.v1
title: Supplementary Material for: Correlation of World Health Organization 2010 Classification for Gastroenteropancreatic Neuroendocrine Neoplasms with the Prognosis of Ovarian Neuroendocrine Neoplasms: Kansai Clinical Oncology Group-Protocol Review Committee/Intergroup Study

description: <b><i>Background:</i></b> In 2014, the World Health Organization (WHO) released a classification system introducing neuroendocrine neoplasms (NENs) of the female reproductive tract, excluding the ovaries. This study aimed to evaluate whether retrospective adaption of the gastroenteropancreatic (GEP)-NEN classification is feasible for ovarian NENs (O-NENs) and correlates with prognosis. <b><i>Methods:</i></b> Sixty-eight patients diagnosed with carcinoid, small cell carcinoma (pulmonary type), paraganglioma, non-small/large cell neuroendocrine carcinoma (NEC), mixed NEC, or undifferentiated carcinomas at 20 institutions in Japan were included in this retrospective cross-sectional study. We identified O-NENs through central pathological review using a common slide set, followed by reclassification according to WHO 2010 guidelines for GEP-NENs. A proportional hazards model was used to assess the association of prognostic factors (age, stage, performance status, histology, and residual disease) with overall survival (OS) and progression-free survival (PFS). <b><i>Results:</i></b> Of the 68 enrolled patients, 48 were eligible for analysis. All carcinoids (<i>n</i> = 32) were reclassified as NET G1/G2, whereas 14 of 16 carcinomas were reclassified as NEC/mixed adeno-NEC (MANEC) (Fisher’s exact test; <i>p</i> &lt; 0.01). The OS/PFS was 49.0/42.5 months and 6.5/3.9 months for NET G1/G2 and NEC/MANEC, respectively. Histology revealed that NEC/MANEC was associated with increased risk of death (HR = 48.0; 95% CI, 3.93–586; <i>p</i> &lt; 0.01) and disease progression (HR = 51.6; 95% CI, 5.54–480; <i>p</i> &lt; 0.01). <b><i>Conclusion:</i></b> Retrospective adaption of GEP-NEN classification to O-NENs is feasible and correlates well with the prognosis of O-NENs. This classification could be introduced for ovarian tumors.
DOI: 10.6084/m9.figshare.12058065.v6
title: Solar wind in situ data suitable for machine learning (python numpy structured arrays): STEREO-A/B, Wind, Parker Solar Probe, Ulysses, Venus Express, MESSENGER

description: These are solar wind in situ data arrays in python pickle format suitable for machine learning, i.e. the arrays consist only of numbers, no strings and no datetime objects.<br><br>See AAREADME_insitu_ML.txt for more explanation.<br>If you use these data for peer reviewed scientific publications, please get in touch concerning usage and possible co-authorship by the authors (C. Möstl, A. J. Weiss, R. L. Bailey, A. Isavnin, D. Stansby): christian.moestl@oeaw.ac.at or twitter @chrisoutofspace <br>Made with https://github.com/cmoestl/heliocats <br><br>Load in python with e.g. for Parker Solar Probe data:<br>&gt; import pickle&gt; filepsp='psp_2018_2019_sceq_ndarray.p'&gt; [psp,hpsp]=pickle.load(open(filepsp, "rb" ) ) <br>plot time vs total field&gt; import matplotlib.pyplot as plt&gt; plt.plot(psp['time'],psp['bt'])<br><br>Times psp[:,0 ] or psp['time'] are in matplotlib format. Variable 'hpsp' contains a header with the variable names and units for each column. Coordinate systems for magnetic field components are RTN (Ulysses), SCEQ (Parker Solar Probe, STEREO-A/B, VEX, MESSENGER), HEEQ (Wind)<br>available parameters:<br>bt = total magnetic fieldbxyz = magnetic field componentsvt = total proton speedvxyz = velocity components (only for PSP)np = proton densitytp = proton temperaturexyz = spacecraft position in HEEQr, lat, lon = spherical coordinates of position in HEEQ<br><br><br><br>
DOI: 10.6084/m9.figshare.12057843
title: Geochemical dataset of amphibole megacrysts and microphenocrysts hosted by lamprophyric dikes in southern New Zealand

description: Major/trace element compositions as well as Sr-Nd-Hf-Pb isotopic compositions of amphibole megacrysts hosted by intraplate lamprophyric magmatism in New Zealand (data from the Alpine Dike Swarm and Westland Dike Swarm). Detailed descriptions of methodologies are included in separate tab.
DOI: 10.6084/m9.figshare.12057843.v1
title: Major/trace element compositions of amphibole megacrysts and microphenocrysts hosted by lamprophyric dikes in New Zealand

description: Major/trace element compositions of amphibole megacrysts and microphenocrysts hosted by intraplate lamprophyric magmatism in New Zealand (data from the Alpine Dike Swarm and Westland Dike Swarm)
DOI: 10.6084/m9.figshare.12057810
title: Study on Syndrome Differentiation Strategy of Phlegm and Blood Stasis Syndromes of Coronary Heart Disease Based on the Experts Consultation over Medical Cases

description: Choosing from the <i>A</i><i>ncient </i><i>Chest Discomfort</i><i> </i><i>M</i><i>edical </i><i>C</i><i>ase</i><i>s</i><i> </i><i>C</i><i>ollection</i><i> </i>and<i> </i><i>C</i><i>oronary </i><i>H</i><i>eart </i><i>D</i><i>isease </i><i>M</i><i>edical </i><i>C</i><i>ase </i><i>C</i><i>ollection of </i><i>N</i><i>ational Chinese </i><i>M</i><i>edicine </i><i>M</i><i>asters</i>, which formed earlier by our research group, 28 medical cases that met the criteria were selected, including 10 ancient medical cases and 18 contemporary medical cases. Of the 28 cases, 9 were phlegm-blood stasis syndrome cases, 9 were phlegm syndrome cases, 5 were blood stasis syndrome cases, and 5 were neither phlegm nor blood stasis syndrome cases. The questionnaire survey of experts consultation was implemented though filed investigation method, and statistical analysis of data was mainly based on frequency analysis. <br>
DOI: 10.6084/m9.figshare.12057810.v1
title: Study on Syndrome Differentiation Strategy of Phlegm and Blood Stasis Syndromes of Coronary Heart Disease Based on the Experts Consultation over Medical Cases

description: Choosing from the <i>A</i><i>ncient </i><i>Chest Discomfort</i><i> </i><i>M</i><i>edical </i><i>C</i><i>ase</i><i>s</i><i> </i><i>C</i><i>ollection</i><i> </i>and<i> </i><i>C</i><i>oronary </i><i>H</i><i>eart </i><i>D</i><i>isease </i><i>M</i><i>edical </i><i>C</i><i>ase </i><i>C</i><i>ollection of </i><i>N</i><i>ational Chinese </i><i>M</i><i>edicine </i><i>M</i><i>asters</i>, which formed earlier by our research group, 28 medical cases that met the criteria were selected, including 10 ancient medical cases and 18 contemporary medical cases. Of the 28 cases, 9 were phlegm-blood stasis syndrome cases, 9 were phlegm syndrome cases, 5 were blood stasis syndrome cases, and 5 were neither phlegm nor blood stasis syndrome cases. The questionnaire survey of experts consultation was implemented though filed investigation method, and statistical analysis of data was mainly based on frequency analysis. <br>
DOI: 10.6084/m9.figshare.12057759
title: C9orf72 hexanucleotide repeat in Huntington-like patients: Systematic review and meta-analysis

description: The protocol was registered on the International Prospective Register of Systematic Reviews database (PROSPERO) (registration number: CRD42018105465). The search was carried out in Medline, Scopus, Web of Science, and Embase in April 2018. Observational studies reporting patients with HLD carrying the hexanucleotide repeat expansion in the <i>C9orf72</i> gene were selected and revised; this process was carried out in duplicate. The cutoff threshold for considering the hexanucleotide expansion as a pathogenic variant was equal or more than 30 G<sub>4</sub>C<sub>2</sub> repeats. The pooled frequency and 95% CI were calculated with random effect models.
DOI: 10.6084/m9.figshare.12057843.v2
title: Geochemical dataset of amphibole megacrysts and microphenocrysts hosted by lamprophyric dikes in southern New Zealand

description: Major/trace element compositions as well as Sr-Nd-Hf-Pb isotopic compositions of amphibole megacrysts hosted by intraplate lamprophyric magmatism in New Zealand (data from the Alpine Dike Swarm and Westland Dike Swarm). Detailed descriptions of methodologies are included in separate tab.
DOI: 10.6084/m9.figshare.12057759.v1
title: C9orf72 hexanucleotide repeat in Huntington-like patients: Systematic review and meta-analysis

description: The protocol was registered on the International Prospective Register of Systematic Reviews database (PROSPERO) (registration number: CRD42018105465). The search was carried out in Medline, Scopus, Web of Science, and Embase in April 2018. Observational studies reporting patients with HLD carrying the hexanucleotide repeat expansion in the <i>C9orf72</i> gene were selected and revised; this process was carried out in duplicate. The cutoff threshold for considering the hexanucleotide expansion as a pathogenic variant was equal or more than 30 G<sub>4</sub>C<sub>2</sub> repeats. The pooled frequency and 95% CI were calculated with random effect models.
DOI: 10.6084/m9.figshare.12057843.v3
title: Geochemical dataset of amphibole megacrysts and microphenocrysts hosted by lamprophyric dikes in southern New Zealand

description: Major/trace element compositions as well as Sr-Nd-Hf-Pb isotopic compositions of amphibole megacrysts hosted by intraplate lamprophyric magmatism in New Zealand (data from the Alpine Dike Swarm and Westland Dike Swarm). Detailed descriptions of methodologies are included in separate tab.
DOI: 10.6084/m9.figshare.12057843.v4
title: Geochemical dataset of amphibole megacrysts and microphenocrysts hosted by lamprophyric dikes in southern New Zealand

description: Major/trace element compositions as well as Sr-Nd-Hf-Pb isotopic compositions of amphibole megacrysts hosted by intraplate lamprophyric magmatism in New Zealand (data from the Alpine Dike Swarm and Westland Dike Swarm). Detailed descriptions of methodologies are included in separate tab.
DOI: 10.6084/m9.figshare.12057843.v5
title: Geochemical dataset of amphibole megacrysts and microphenocrysts hosted by lamprophyric dikes in southern New Zealand

description: Major/trace element compositions as well as Sr-Nd-Hf-Pb isotopic compositions of amphibole megacrysts hosted by intraplate lamprophyric magmatism in New Zealand (data from the Alpine Dike Swarm and Westland Dike Swarm). Detailed descriptions of methodologies are included in separate tab.
DOI: 10.6084/m9.figshare.12057843.v6
title: Geochemical dataset of amphibole megacrysts and microphenocrysts hosted by lamprophyric dikes in southern New Zealand

description: Major/trace element compositions as well as Sr-Nd-Hf-Pb isotopic compositions of amphibole megacrysts hosted by intraplate lamprophyric magmatism in New Zealand (data from the Alpine Dike Swarm and Westland Dike Swarm). Detailed descriptions of methodologies are included in separate tab.
DOI: 10.6084/m9.figshare.12057621
title: Additional file 4 of Training in obstetric and neonatal emergencies in Mexico: effect on knowledge and self-efficacy by gender, age, shift, and profession

description: Additional file 4:Table 4. Change in average knowledge and self-efficacy scores after PRONTO training, by topic and participants’ characteristics.
DOI: 10.6084/m9.figshare.12057621.v1
title: Additional file 4 of Training in obstetric and neonatal emergencies in Mexico: effect on knowledge and self-efficacy by gender, age, shift, and profession

description: Additional file 4:Table 4. Change in average knowledge and self-efficacy scores after PRONTO training, by topic and participants’ characteristics.
DOI: 10.6084/m9.figshare.12057843.v7
title: Geochemical dataset of amphibole megacrysts and microphenocrysts hosted by lamprophyric dikes in southern New Zealand

description: Major/trace element compositions as well as Sr-Nd-Hf-Pb isotopic compositions of amphibole megacrysts hosted by intraplate lamprophyric magmatism in New Zealand (data from the Alpine Dike Swarm and Westland Dike Swarm). Detailed descriptions of methodologies are included in separate tab.
DOI: 10.6084/m9.figshare.12057618
title: Additional file 3 of Training in obstetric and neonatal emergencies in Mexico: effect on knowledge and self-efficacy by gender, age, shift, and profession

description: Additional file 3:Table 3. Adjusted knowledge and self-efficacy score differences at baseline (pre-training), by topic and participants’ characteristics.
DOI: 10.6084/m9.figshare.12057612
title: Additional file 1 of Butterfly eyespot color pattern formation requires physical contact of the pupal wing epithelium with extracellular materials for morphogenic signal propagation

description: Additional file 1: Table S1. Eyespot change scores for treatments. Table S2. Eyespot change percentages and contact angles for materials. Table S3. Eyespot size change ratios for treatments.
DOI: 10.6084/m9.figshare.12057618.v1
title: Additional file 3 of Training in obstetric and neonatal emergencies in Mexico: effect on knowledge and self-efficacy by gender, age, shift, and profession

description: Additional file 3:Table 3. Adjusted knowledge and self-efficacy score differences at baseline (pre-training), by topic and participants’ characteristics.
DOI: 10.6084/m9.figshare.12057843.v8
title: Geochemical dataset of amphibole megacrysts and microphenocrysts hosted by lamprophyric dikes in southern New Zealand

description: Major/trace element compositions as well as Sr-Nd-Hf-Pb isotopic compositions of amphibole megacrysts hosted by intraplate lamprophyric magmatism in New Zealand (data from the Alpine Dike Swarm and Westland Dike Swarm). Detailed descriptions of methodologies are included in separate tab.
DOI: 10.6084/m9.figshare.12057606
title: Additional file 1 of Training in obstetric and neonatal emergencies in Mexico: effect on knowledge and self-efficacy by gender, age, shift, and profession

description: Additional file 1:Table 1. Multiple logistic model of the determinants of study drop-out (0 = remained in the study; 1 = dropped out).
DOI: 10.6084/m9.figshare.12057612.v1
title: Additional file 1 of Butterfly eyespot color pattern formation requires physical contact of the pupal wing epithelium with extracellular materials for morphogenic signal propagation

description: Additional file 1: Table S1. Eyespot change scores for treatments. Table S2. Eyespot change percentages and contact angles for materials. Table S3. Eyespot size change ratios for treatments.
DOI: 10.6084/m9.figshare.12057606.v1
title: Additional file 1 of Training in obstetric and neonatal emergencies in Mexico: effect on knowledge and self-efficacy by gender, age, shift, and profession

description: Additional file 1:Table 1. Multiple logistic model of the determinants of study drop-out (0 = remained in the study; 1 = dropped out).
DOI: 10.6084/m9.figshare.12057609
title: Additional file 2 of Training in obstetric and neonatal emergencies in Mexico: effect on knowledge and self-efficacy by gender, age, shift, and profession

description: Additional file 2:Table 2. Baseline knowledge and self-efficacy of PRONTO training participants, 2013–2014.
DOI: 10.6084/m9.figshare.12057609.v1
title: Additional file 2 of Training in obstetric and neonatal emergencies in Mexico: effect on knowledge and self-efficacy by gender, age, shift, and profession

description: Additional file 2:Table 2. Baseline knowledge and self-efficacy of PRONTO training participants, 2013–2014.
DOI: 10.6084/m9.figshare.12057507
title: Additional file 1 of The UCSC repeat browser allows discovery and visualization of evolutionary conflict across repeat families

description: Additional file 1: Table S1. Summary of Repeat Browser statistics. This table contains information regarding nomencature changes between the Repeat Browser, RepeatMasker and Dfam as well as several staistics regarding the consensuses and chaining.
DOI: 10.6084/m9.figshare.12057507.v1
title: Additional file 1 of The UCSC repeat browser allows discovery and visualization of evolutionary conflict across repeat families

description: Additional file 1: Table S1. Summary of Repeat Browser statistics. This table contains information regarding nomencature changes between the Repeat Browser, RepeatMasker and Dfam as well as several staistics regarding the consensuses and chaining.
DOI: 10.6084/m9.figshare.12057495
title: Additional file 9 of Accuracy and concordance of measurement methods to assess non-adherence after renal transplantation - a prospective study

description: Additional file 9. a: Course of unadjusted means of the self-assessed intervention effect. 9 b: Boxplots for the self-assessed intervention effect.
DOI: 10.6084/m9.figshare.12057495.v1
title: Additional file 9 of Accuracy and concordance of measurement methods to assess non-adherence after renal transplantation - a prospective study

description: Additional file 9. a: Course of unadjusted means of the self-assessed intervention effect. 9 b: Boxplots for the self-assessed intervention effect.
DOI: 10.6084/m9.figshare.12057489
title: Additional file 8 of Accuracy and concordance of measurement methods to assess non-adherence after renal transplantation - a prospective study

description: Additional file 8. a: Percentage Frequency of Timing Adherence ±2 h – Electronic Monitoring (raw scores). 8 b: Estimated probability of Timing Adherence ±2 h – Electronic Monitoring.
DOI: 10.6084/m9.figshare.12057483
title: Additional file 7 of Accuracy and concordance of measurement methods to assess non-adherence after renal transplantation - a prospective study

description: Additional file 7. a: Percentage Frequency of Taking Adherence - Electronic Monitoring (raw scores). 8 b: Estimated probability of Taking Adherence - Electronic Monitoring.
DOI: 10.6084/m9.figshare.12057489.v1
title: Additional file 8 of Accuracy and concordance of measurement methods to assess non-adherence after renal transplantation - a prospective study

description: Additional file 8. a: Percentage Frequency of Timing Adherence ±2 h – Electronic Monitoring (raw scores). 8 b: Estimated probability of Timing Adherence ±2 h – Electronic Monitoring.
DOI: 10.6084/m9.figshare.12057483.v1
title: Additional file 7 of Accuracy and concordance of measurement methods to assess non-adherence after renal transplantation - a prospective study

description: Additional file 7. a: Percentage Frequency of Taking Adherence - Electronic Monitoring (raw scores). 8 b: Estimated probability of Taking Adherence - Electronic Monitoring.
DOI: 10.6084/m9.figshare.12057426
title: Additional file 5 of A comprehensive analysis of sialolith proteins and the clinical implications

description: Additional file 5. G.O.-KEGG analysis of sialoliths non- homologous to bone proteins.
DOI: 10.6084/m9.figshare.12057420
title: Additional file 4 of A comprehensive analysis of sialolith proteins and the clinical implications

description: Additional file 4. G.O.-KEGG analysis of sialoliths homologous to bone proteins.
DOI: 10.6084/m9.figshare.12057426.v1
title: Additional file 5 of A comprehensive analysis of sialolith proteins and the clinical implications

description: Additional file 5. G.O.-KEGG analysis of sialoliths non- homologous to bone proteins.
DOI: 10.6084/m9.figshare.12057414
title: Additional file 3 of A comprehensive analysis of sialolith proteins and the clinical implications

description: Additional file 3. G.O.-KEGG analysis of control samples (Max. bone, tooth and periosteal tissue proteins).
DOI: 10.6084/m9.figshare.12057420.v1
title: Additional file 4 of A comprehensive analysis of sialolith proteins and the clinical implications

description: Additional file 4. G.O.-KEGG analysis of sialoliths homologous to bone proteins.
DOI: 10.6084/m9.figshare.12057414.v1
title: Additional file 3 of A comprehensive analysis of sialolith proteins and the clinical implications

description: Additional file 3. G.O.-KEGG analysis of control samples (Max. bone, tooth and periosteal tissue proteins).