cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.axxbcv
title: Occurrence Download

description: A dataset containing 211 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "TaxonKey is one of (Chironectes minimus (Zimmermann, 1780))"
 ]
}

 The dataset includes 211 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0198449-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jpypfa
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cineraria platycarpa DC."
 ]
}

 The dataset includes 24 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137958-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zzzdrg
title: Occurrence Download

description: A dataset containing 13989 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Korea (Democratic People’s Republic of)"
 ]
}

 The dataset includes 13989 records from 196 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004440-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10974512
title: Assessing the Overlap of Science Knowledge Graphs: A Quantitative Analysis — exact and related matches

description: Results of the 'Assessing the Overlap of Science Knowledge Graphs: A Quantitative Analysis'  papers. There are 2 datasets:



'exact_matches.csv': contains detailed information about the concepts present both in OpenAlex and OpenAIRE.

'related_matches.csv': contains detailed information about the concepts from OpenAlex and OpenAIRE that were not present in both KGs but got aligned following the algorithm presented in the paper.


The detailed information refers to the following column:



Category1: name of the first category

Source1: source of the first category ('OpenAlex' or 'OpenAIRE')

Category2: name of the second category

Source2: source of the first category ('OpenAlex' or 'OpenAIRE')

Similarity: semantic similarity value of the two categories

PapersInC1: number of papers from the collected dataset belonging to the first category

PapersInC2: number of papers from the collected dataset belonging to the second category

PapersInBoth: number of papers from the collected dataset belonging to both of the categories

Agreement: the value of the agreement of the categories in the tw KGs (Intersection over Union)
DOI: 10.15468/dl.bn9rdx
title: Occurrence Download

description: A dataset containing 1269 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nannotrigona testaceicornis (Lepeletier, 1836)"
 ]
}

 The dataset includes 1269 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004441-150316153013904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trgzy5
title: Occurrence Download

description: A dataset containing 17828 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Simuliidae"
 ]
}

 The dataset includes 17828 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137870-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nllbeb
title: Occurrence Download

description: A dataset containing 155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "Country is Colombia",
 "RecordedBy is Churchil, S. P."
 ]
}

 The dataset includes 155 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004441-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbps3f
title: Occurrence Download

description: A dataset containing 11389 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cicuta maculata L."
 ]
}

 The dataset includes 11389 records from 191 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137871-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a2e9je
title: Occurrence Download

description: A dataset containing 6139 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Elephas maximus Linnaeus, 1758"
 ]
}

 The dataset includes 6139 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023652-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.8053234
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Hermano Apolinar María, http://www.wikidata.org/entity/Q107151087. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q107151087
DOI: 10.15468/dl.tufnwx
title: Occurrence Download

description: A dataset containing 2169 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cortinarius subtortus (Pers.) Fr."
 ]
}

 The dataset includes 2169 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004441-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x2rtf5
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cienfuegosia integrifolia (Chodat & Hassl.) Fryxell"
 ]
}

 The dataset includes 15 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137897-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10246315
title: Multiplexed imaging mass cytometry analysis characterizes the vascular niche in pancreatic cancer

description: All data supporting the publication: "Multiplexed imaging mass cytometry analysis characterizes the vascular niche in pancreatic cancer."
1. Fully_Processed_OME.TIFF: This folder contains the OME.TIFF files with all markers after compensation and hot pixel removal for visualization of the data. These can be opened with QuPath and other software. 
2. PDAC_IMC_Seurat_FINAL.rds: Seurat object of all cells included in the analysis with cell type and neighborhood annotations, and unintegrated and rPCA-integrated UMAP reductions. 
3. Raw_Data_TIFF_Files: All raw individual TIFF files from the image acquisition
4. ROI_Selection: Brightfield and IHC images of individual samples showing where the ROIs for each sample are collected 
5. Segmentation_Files: All relevant segmentation files from Mesmer for nuclear and whole cell segmentation. 
6. H&E Images for each case scanned at 40x
DOI: 10.5281/zenodo.10976289
title: Visuomotor Reaction Time Performance in Collegiate Contact and Limited Contact Team Sports

description: Purpose: This study assessed baseline reaction time (RT) performance of collegiate student-athletes participating in a contact team sport. The goal was to determine if significant differences in visuomotor RT existed between athletes who had previously sustained a concussion and were now cleared to play their respective sport against a control population of peers who have not sustained a concussion.  Methods: This study employed a cross-sectional, quantitative, correlational study design. 269 Athletes from contact team sports were identified for potential inclusion. 62 enrolled in the study and 60 participants completed the study. Intervention: Participants completed three tests to assess their reaction time: Trail Making Test, Ruler Drop Test, and Light Sensor Reaction Test. Participants completed intake paperwork indicating if they had a previous concussion. Results: Participants were 70% female (n=42) and 30% male (n=18). Over 38% of participants (n=23) indicated a prior history of at least one diagnosed concussion or TBI. Mean age was 20.7 ± 1.5 years. No significant differences were found between groups (p>0.05). Conclusion: Collegiate athletes who recovered from a concussion do not demonstrate delays in RT compared to their non-concussed peers. Contact sport athletes should be allowed to return to play their respective sports when they have met their established healing goals via objective performance evaluation and subjective emotional readiness to play.
DOI: 10.15468/dl.hnjezw
title: Occurrence Download

description: A dataset containing 90738 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vulpes vulpes (Linnaeus, 1758)"
 ]
}

 The dataset includes 90738 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023661-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cmfydg
title: Occurrence Download

description: A dataset containing 280 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Romerolagus diazi (Ferrari-Pérez, 1893)"
 ]
}

 The dataset includes 280 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004441-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10976265
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Hermano Apolinar María, http://www.wikidata.org/entity/Q107151087. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q107151087
DOI: 10.15468/dl.6q4grm
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cineraria othonnoides Harv."
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137955-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.8051427
title: Multiplexed imaging mass cytometry analysis characterizes the vascular niche in pancreatic cancer

description: All data supporting the publication: "Multiplexed imaging mass cytometry analysis characterizes the vascular niche in pancreatic cancer."
1. Fully_Processed_OME.TIFF: This folder contains the OME.TIFF files with all markers after compensation and hot pixel removal for visualization of the data. These can be opened with QuPath and other software. 
2. PDAC_IMC_Seurat_FINAL.rds: Seurat object of all cells included in the analysis with cell type and neighborhood annotations, and unintegrated and rPCA-integrated UMAP reductions. 
3. Raw_Data_TIFF_Files: All raw individual TIFF files from the image acquisition
4. ROI_Selection: Brightfield and IHC images of individual samples showing where the ROIs for each sample are collected 
5. Segmentation_Files: All relevant segmentation files from Mesmer for nuclear and whole cell segmentation. 
6. H&E Images for each case scanned at 40x
DOI: 10.5281/zenodo.10976290
title: Visuomotor Reaction Time Performance in Collegiate Contact and Limited Contact Team Sports

description: Purpose: This study assessed baseline reaction time (RT) performance of collegiate student-athletes participating in a contact team sport. The goal was to determine if significant differences in visuomotor RT existed between athletes who had previously sustained a concussion and were now cleared to play their respective sport against a control population of peers who have not sustained a concussion.  Methods: This study employed a cross-sectional, quantitative, correlational study design. 269 Athletes from contact team sports were identified for potential inclusion. 62 enrolled in the study and 60 participants completed the study. Intervention: Participants completed three tests to assess their reaction time: Trail Making Test, Ruler Drop Test, and Light Sensor Reaction Test. Participants completed intake paperwork indicating if they had a previous concussion. Results: Participants were 70% female (n=42) and 30% male (n=18). Over 38% of participants (n=23) indicated a prior history of at least one diagnosed concussion or TBI. Mean age was 20.7 ± 1.5 years. No significant differences were found between groups (p>0.05). Conclusion: Collegiate athletes who recovered from a concussion do not demonstrate delays in RT compared to their non-concussed peers. Contact sport athletes should be allowed to return to play their respective sports when they have met their established healing goals via objective performance evaluation and subjective emotional readiness to play.
DOI: 10.5281/zenodo.10976317
title: pangenome-layout-dataset

description: The archived folder includes the CPU-generated (odgi-layout) and GPU-generated (odgi-layout-gpu) layouts and images for human pangenome chromosomes. It also includes a script to download all the dataset of human pangenome to support the reproduce of the experimental results.
DOI: 10.15468/dl.a29ct5
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Hong Kong",
 "TaxonKey is Leucogeranus leucogeranus (Pallas, 1773)"
 ]
}

 The dataset includes 66 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008299-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejosvk
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Selaginellales",
 "Country is Zimbabwe"
 ]
}

 The dataset includes 46 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004441-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2x4g2r
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cineraria vallis-pacis Dinter ex Merxm."
 ]
}

 The dataset includes 46 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137963-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zu7w9c
title: Occurrence Download

description: A dataset containing 10629 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus Fischer, 1803",
 "HasCoordinate is true",
 "Country is Netherlands"
 ]
}

 The dataset includes 10629 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066199-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yi7fxg
title: Occurrence Download

description: A dataset containing 1147 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chamaecyparis formosensis Matsum."
 ]
}

 The dataset includes 1147 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004441-160803222355964/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10976316
title: pangenome-layout-dataset

description: The archived folder includes the CPU-generated (odgi-layout) and GPU-generated (odgi-layout-gpu) layouts and images for human pangenome chromosomes. It also includes a script to download all the dataset of human pangenome to support the reproduce of the experimental results.
DOI: 10.15468/dl.epjx95
title: Occurrence Download

description: A dataset containing 524 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cinna poiformis (Kunth) Scribn. & Merr."
 ]
}

 The dataset includes 524 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0137967-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10373287
title: Dataset: Uncovering Obscured Phonon Dynamics from Powder Inelastic Neutron Scattering using Machine Learning

description: Dataset of simulated and experimental spectra for the manuscript: Uncovering Obscured Phonon Dynamics from Powder Inelastic Neutron Scattering using Machine Learning. 

The data.zip contains all the simulated spectra and labels.

The dataset.zip contains the divided subsets for training, validation and testing purposes, as well as the experimental dataset.
DOI: 10.5281/zenodo.10976322
title: Simulation data from "Mass Flows in Expanding Coronal Loops"

description: 24 HYDRAD hydrodynamic simulations from the paper "Mass Flows in Expanding Coronal Loops" by Reep, Scott, Chhabra, Unverferth & Knizhnik, accepted for publication in the Astrophysical Journal, 2024 (https://arxiv.org/abs/2403.12358).  Each of Figures 1, 2, 3, and 9 have six simulations with varying cross-sectional area expansion factors.  These simulations were used to generate the plots in the paper.

The output of the simulation data can be found in the ./Results/ folder of each simulation's directory.  The source code was modified to hard code the expansion factors in ./HYDRAD/source/eqns.cpp, under the functions double CEquations::CalculateMagneticField and double CEquations::CalculateCrossSection, rather than using polynomial fits as is standard in HYDRAD.
DOI: 10.5281/zenodo.10976417
title: Data for Barry et al 2024 (Genome Biology)

description: This repository contains the processed single-cell CRISPR screen data used in Barry et al 2024 (Genome Biology). See more information in the analysis reproduction repository (https://github.com/Katsevich-Lab/sceptre2-manuscript).
DOI: 10.5281/zenodo.10976437
title: Data of industrial heat source between 2012 and 2021 using long-term Active Fire/Hotspot data in China

description: Industrial heat sources serve as crucial indicators of energy consumption levels and air pollution. Energy-intensive industries are facing substantial challenges in transforming and upgrading in China. Therefore, accurately identifying industrial heat source locations and monitoring their temporal patterns are becoming utmost importance. In this study, a long-term industrial heat source datasets between 2012 and 2021 in China using long-term Active Fire/Hotspots (ACF) data has been constructed to monitor and analyze large-scale industrial heat sources. Firstly, density segmentation method based on an improved k-means algorithm using long-term ACF data and spatial topological correlation analysis was conducted to build industrial heat sources. Then, 4410 industrial heat sources were obtained between 2012 and 2021 in China, with an identification accuracy of 95.08% by manual verification using high-resolution remote sensing images and point of interest (POI) data. Finally, the trend in the spatio-temporal variation of industrial heat sources was analyzed using long-term series. The results from 2012 to 2021 showed that the spatial distribution of industrial heat sources in China exhibits local aggregation and a gradual shift from east to west.And,the number of industrial heat sources in China has followed a trend of an initial increase from 2012 to 2014, followed by a decrease since 2014, consistent with national energy reform-related policies.The result of this study indicated the temporal variation of industrial heat sources, enhanced the accuracy of fire points category identification, and demonstrated potential for advancing energy efficiency, emission reduction, and sustainable development in China.
DOI: 10.5281/zenodo.10976321
title: Simulation data from "Mass Flows in Expanding Coronal Loops"

description: 24 HYDRAD hydrodynamic simulations from the paper "Mass Flows in Expanding Coronal Loops" by Reep, Scott, Chhabra, Unverferth & Knizhnik, accepted for publication in the Astrophysical Journal, 2024 (https://arxiv.org/abs/2403.12358).  Each of Figures 1, 2, 3, and 9 have six simulations with varying cross-sectional area expansion factors.  These simulations were used to generate the plots in the paper.

The output of the simulation data can be found in the ./Results/ folder of each simulation's directory.  The source code was modified to hard code the expansion factors in ./HYDRAD/source/eqns.cpp, under the functions double CEquations::CalculateMagneticField and double CEquations::CalculateCrossSection, rather than using polynomial fits as is standard in HYDRAD.
DOI: 10.5281/zenodo.10976416
title: Data for Barry et al 2024 (Genome Biology)

description: This repository contains the processed single-cell CRISPR screen data used in Barry et al 2024 (Genome Biology). See more information in the analysis reproduction repository (https://github.com/Katsevich-Lab/sceptre2-manuscript).
DOI: 10.5281/zenodo.10976446
title: Paratopy classes of 2-layer latin cuboids and nonextedible  latin cuboids of order 5
DOI: 10.15468/dl.8faghq
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atropoides olmec (Pérez-Higareda, Smith & Juliá, 1985)",
 "Country is Mexico"
 ]
}

 The dataset includes 15 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004441-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10204025
title: Paratopy classes of 2-layer latin cuboids and nonextedible  latin cuboids of order 5
DOI: 10.5281/zenodo.10976482
title: Dataset: Digital Transformation in Developing Countries (A Case Study)

description: This data represents the availability of data to support the publication of researchers' papers on digital transformation in developing countries (case study: Indonesia).