cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9n2mfv8
title: Pallid sturgeon free embryo drift and dispersal experiment data from the Upper Missouri River, Montana and North Dakota, 2019

description: The data set contains sampling data, catch data, and biological data associated with a broad-scale experiment to examine free embryo dispersal and larval settlement of endangered pallid sturgeon (Scaphirhynchus albus) in the Missouri River of eastern Montana and western North Dakota. On 20190701, two age groups of pallid sturgeon including 771,707 1-day post-hatch (dph) free embryos and 200,786 5-dph free embryos were released in the Missouri River where dispersal in the water column was assessed through 150 miles. Following dispersal, beam trawl sampling of benthic habitats was conducted to verify settlement and quantify the spatial extent of settlement. Trawling was conducted for nine consecutive weeks from 20190716 to 20190911 in eight river bends positioned between river miles 1552.0 and 1591.8. A tissue sample was obtained from captured larval Scaphirhynchus. The tissue sample was used in genetic analysis to identify species and identify parentage. The data set includes sampling location information, benthic trawl catch data for Scaphirhynchus species and other species, genetic results distinguishing Scaphirhynchus species as shovelnose sturgeon or pallid sturgeon, parentage for the pallid sturgeon, and biological data for all species.
DOI: 10.5281/zenodo.12706872
title: Code and data for the article "Feasible deployment of carbon capture and storage and the requirements of climate targets"

description: Here, we present data and code for our study “Feasible deployment of carbon capture and storage and the requirements of climate targets” (2024), where we project feasible ranges of carbon capture and storage (CCS) deployment in this century based on historical evidence of CCS deployment and other policy-driven technologies.
DOI: 10.17909/87p2-td95
title: Data from Inglis+2024
DOI: 10.5255/ukda-sn-7799-1
title: National Survey of Sexual Attitudes and Lifestyles, 2010-2012
DOI: 10.5281/zenodo.13287613
title: Accelerometer-Derived Atmospheric Density from the CHAMP and GRACE Satellites

description: Archive of the thermospheric density dataset (including estimated uncertainties) for CHAMP and GRACE satellite accelerometer missions, first released in February of 2011, with an extension of GRACE density data in 2012.
DOI: 10.5281/zenodo.13736930
title: Raw data to "Order-by-disorder in the antiferromagnetic $J_1$-$J_2$-$J_3$ transverse-field Ising model on the ruby lattice"

description: This directory contains the data used to generate the results in the work "Order-by-disorder in the antiferromagnetic $J_1$-$J_2$-$J_3$ transverse-field Ising model on the ruby lattice" [1].

To get an overview of the organization of the directory and a description of the data we recommend the README.txt file.

[1]: A. Duft et al., Order-by-disorder in the antiferromagnetic $J_1$-$J_2$-$J_3$ transverse-field Ising model on the ruby lattice. arXiv:2312.12941
DOI: 10.5281/zenodo.3987736
title: Bias Corrected Climate Projections from CMIP6 Models for South Asia

description: Bias-corrected data of precipitation, maximum temperature, and minimum temperature are developed for six countries in South Asia. Each zipped country file contains 13 models, and each model includes five scenarios (historical, ssp126, ssp245, ssp370, and ssp585). Inside a scenario folder, a file named PrecipData can be read as the first three columns from the 3rd row contain year month and day numbers. 1st two rows from the 3rd column represent the longitude and latitude. Separate ObservedData.zip file contains daily observed precipitation (mm), maximum temperature (deg C), and minimum temperature (deg C) data in each grid file.
DOI: 10.6084/m9.figshare.25138106
title: Supplementary Material for: Multiplex proteomics in the identification of potential biomarkers of very severe sinusoidal obstruction syndrome/veno-occlusive disease (SOS/VOD) in allogeneic hematopoietic cell transplant patients treated with defibrotide

description: Introduction
Despite well-established clinical criteria for diagnosis of SOS/VOD following allogeneic HCT, there is a lack of established diagnostic protein biomarkers.

Methods
Prospective samples were collected from patients with very severe SOS/VOD at diagnosis and days +3, +7, +14, and +30 post-initiation of defibrotide. Samples from age-matched controls with no VOD were collected at day +14, +30, +60, +90 and +180 following allogeneic HCT. Serum samples were analyzed for 2925 protein levels by antibody-based proximity extension assay (PEA). Mean differences in the log-transformed abundance values were compared using t-tests in a volcano plot. 

Results
Five patients with very severe SOS/VOD and five control patients were compared. Ten proteins were identified that showed a statistically significant and log-transformed 3-fold increase in concentration. They were CALCA, CCL20, GPR37, IGFBP4, IL1RL1, SLC39A14, SPINK4, FABP3, MYL3, and CHCHD10. Four different proteins, namely CD83, LAIR2, CD7, and HEM6 showed a significant decrease with defibrotide treatment. SOS/VOD resolved in 80% (n=4) of patients, while one patient deceased due to SOS/VOD.

Conclusion
PEA technology identified 10 proteins that were significantly elevated in patients with very severe SOS/VOD. Prospective studies in a larger cohort using this technology may be able to conclusively identify diagnostic protein biomarkers for SOS/VOD.
DOI: 10.12760/02-2015-1-02
title: Salt lakes separated from the White Sea

description: Many lakes at different stages of separation from the sea were formed along the coast of Kandalakshsky Gulf of the White Sea because of a rapid glacioisostatic lifting. The natural stage of their hydrological evolution is the meromixis. Five stratified lakes at different stages of isolation were studied in 2010-2014. The studies included echo-sounding of bottom topography, measurements of hydrological parameters: temperature, salinity, pH, redox potential, oxygen content, as well as registration of organoleptic properties of water, and in situ illumination measurements at different depths. Data from four years of observation are generalized, the vertical structure of the lakes was determined, as well is its seasonal and interannual variations. The lakes are ranked by chronology of their separation from the sea.
DOI: 10.1285/i24212113v4i2p22
title: Black Lives (and stories) Matter: Race narrative therapy in Black hair care spaces

description: Black people suffer unjustly from police violence and race-related trauma, but limited research addresses how telling stories may play a critical role in how Black people cope in community-based spaces. This article formulates the collaboration between Black hair care spaces and psychologist to deconstruct racial experiences through Race Narrative Therapy (RNT) techniques. This convenient setting is ideal for community psychology interventions to address mental health disparities and addressing sociopolitical development.
DOI: 10.1285/i24212113v6i2-1p76
title: A qualitative evidence synthesis of refugee patients' and professionals' perspectives on mental health support

description: To generate a more comprehensive understanding of mental health support for refugees, a qualitative evidence synthesis of studies examining professionals' and patients' perspectives was conducted. The aim was to identify what refugees and psycho-social professionals working with refugees perceived as positive/helpful and negative/hindering in the therapeutic process.Six electronic databases were searched, followed by citation tracking. Of the 711 studies found, 10 studies were selected for a thematic synthesis based on inclusion criteria such as being qualitative research reports published after 1998. From these studies, referring to 145 insider perspectives, descriptive themes were developed and subsequently synthesised into 13 analytical clusters. The results highlight the importance of a trusting therapeutic relationship, of the adaptation of therapeutic approaches to patients' needs and situation and of psycho-social support, and of cultural sensitivity and external support structures for professionals. Negative or hindering aspects were identified as a lack of mental health care structures, the impact of the post-migrational situation of patients' well-being, cultural and language differences, and a context of mistrust and negative experiences. Finally, ambivalences were formulated regarding verbal therapies, trauma exposure, the use of mental health care, and the impacts of this work on professionals. Results are discussed in relation to flexible therapeutic boundaries. Suggestions are made for practice, such as using integrative approaches that focus on psychoeducation and transparency, and for future research, such as investigating psychotherapy with refugees in non-Western countries.
DOI: 10.5281/zenodo.12568287
title: Dataset for  "The Role of Upper Mantle Forces in Post-Subduction Tectonics: Plumelet and Active Rifting in the East Anatolian Plateau" (G-Cubed, 2024).

description: This archive contains datasets related to the manuscript “The Role of Upper Mantle Forces in Post-Subduction Tectonics: Plumelet and Active Rifting in the East Anatolian Plateau” by Uluocak et al., (G-cubed). It contains input data, codes, and outputs for the numerical model shown and discussed in the paper.  Please read the README.txt file for more information, and feel free to contact the corresponding author (Ebru Şengül Uluocak, ebrusengul@gmail.com) who is an open-source advocate and a supporter of open- science.
DOI: 10.5281/zenodo.13472209
title: research data for the article Elenius et al, 'Where can rewetting of forested peatland reduce extreme flows?'

description: This dataset includes data of changes in hydrology when rewetting of drained forested peatland is performed. Details are explained in the companion article, Elenius et al, 'Where can rewetting of forested peatland reduce extreme flows?'

Data worksheets and columns are described on the readme worksheet in the file.
DOI: 10.5281/zenodo.5838179
title: DeepDance: Motion capture data of improvised dance (2019)

description: <em>When using this resource, please cite Wallace, B., Nymoen, K., Martin, C.P & Tøressen, J. (2022). DeepDance: Motion capture data of improvised dance (2019) (version 1.0). Zenodo 10.5281/zenodo.5838179</em> <strong>Abstract</strong> This dataset comprises full-body motion capture of dance as well as corresponding audio files. Nine dancers were recorded individually, improvising to six different audio files. The motion was captured in units of mm at 250Hz using a Qualisys infra-red optical system. The experiment was carried out at the University of Oslo in October 2019. For each dancer, 3 performances are recorded for each musical piece, resulting in 162 motion capture files. The dataset was collected for use as training data in deep learning for motion generation. This dataset also includes MATLAB code to visualize the motion capture files. <strong>Music</strong> Skarphedinsson, M. Wallace, B. (2019). “Song a” Skarphedinsson, M. Wallace, B. (2019). “Song b” Skarphedinsson, M. Wallace, B. (2019). “Song c” Skarphedinsson, M. Wallace, B. (2019). “Song d” Skarphedinsson, M. Wallace, B. (2019). “Song f” LaClair, J. Bounce. Jesse LaClair, (2018) <em>Referenced here as “Song e”</em> <strong>Data Description</strong> The following data types are provided: Motion (marker position): Recorded with Qualisys Track Manager and saved as tab-separated .tsv files. Stimuli: audio .wav files containing 1 minute of the tracks described above. Code: MATLAB script for visualizing the motion capture files. <strong>Post-processing: </strong> The motion capture files are downsampled to 30 fps. Body segments have been standardized across all dancers in the data set and normalized so that the root marker is set at the origin. For further details please see [2]. <strong>Acknowledgements</strong> This work was partially supported by the Research Council of Norway through its Centres of Excellence scheme, project number 262762. <strong>Conflicts of Interest</strong> The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
description: {"references": ["Benedikte Wallace, Charles P Martin, Jim T\u00f8rresen, and Kristian Nymoen. 2021. Learning Embodied Sound-Motion Mappings: Evaluating AI-Generated Dance Improvisation. In Creativity and Cognition. 1\u20139", "Benedikte Wallace, Charles P. Martin, Jim Torresen, and Kristian Nymoen. Towards movement generation with audio features. In Proceedings of the 11th International Conference on Computational Creativity, 2020."]}
DOI: 10.5281/zenodo.7945593
title: Supplementary Material for On the Experiences of Practitioners with Requirements Elicitation Techniques

description: Supplementary Material for the paper entitled "<em>On the Experiences of Practitioners with Requirements Elicitation Techniques</em>". <strong>Abstract</strong> Requirements elicitation is a crucial process in software engineering, which involves identifying and understanding the needs of stakeholders to define system requirements. Several techniques are used for requirements elicitation, each with unique advantages, disadvantages, and challenges. This paper presents the findings of a survey conducted among 33 practitioners in the software development community to investigate their experiences with requirements elicitation techniques. The results revealed that practitioners find the elicitation process highly challenging due to difficulties managing the relationship between the development team and the client, understanding complex business processes, and the lack of knowledge among stakeholders. The survey also assessed the participants' familiarity with various elicitation techniques. The most well-known techniques were brainstorming, data analysis, use cases, interviews, user stories, and prototyping. In contrast, techniques such as ethnography, Quality Function Deployment (QFD), Joint Application Development (JAD), blueprint, and laddering were less recognized. When providing the pros and cons of some techniques, participants considered techniques' clarity, speed of use, resource cost, and stakeholder involvement. This research contributes to the field by highlighting challenges, providing insights into practitioner experiences, and guiding informed decision-making in requirements elicitation.
DOI: 10.5284/1078322
title: Norfolk Archaeology Journal

description: The Norfolk and Norwich Archaeological Society (NNAS) first published its journal, Norfolk Archaeology, in 1846. Each volume comprises 3-4 annual parts, containing papers on the history, antiquities and archaeology of Norfolk and the East Anglian region, and often bringing in wider national or international themes. Digitisation of the Norfolk Archaeology journal, two volumes of the Visitation of Norfolk in the Year 1563, and the 1853 Catalogue of the Antiquities in the Norfolk and Norwich Museum was generously supported by the Marc Fitch Fund.
DOI: 10.5285/3628cb2fdba443588155e15dee8e5352
title: ESA Fire Climate Change Initiative (Fire_cci): MODIS Fire_cci Burned Area Grid product, version 5.1

description: The ESA Fire Disturbance Climate Change Initiative (CCI) project has produced maps of global burned area derived from satellite observations. The MODIS Fire_cci v5.1 grid product described here contains gridded data on global burned area derived from the MODIS instrument onboard the TERRA satellite at 250m resolution for the period 2001 to 2017. This product supercedes the previously available MODIS v5.0 product. This gridded dataset has been derived from the MODIS Fire_cci v5.1 pixel product (also available) by summarising its burned area information into a regular grid covering the Earth at 0.25 x 0.25 degrees resolution and at monthly temporal resolution. Information on burned area is included in 23 individual quantities: sum of burned area, standard error, fraction of burnable area, fraction of observed area, number of patches and the burned area for 18 land cover classes, as defined by the Land_Cover_cci v2.0.7 product. For further information on the product and its format see the Fire_cci product user guide in the linked documentation.
DOI: 10.5519/qd.jeb6stod
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (13 records)
DOI: 10.5519/qd.mpn60rsw
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (6 records)
DOI: 10.5519/qd.nzju3sdy
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5519/qd.oy9rwi38
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (12 records)
DOI: 10.5519/qd.u56d9kwh
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.60521/331754
title: Processed bathymetry data (ESRI ASCII grids) from the continental slope of the Canadian Beaufort Sea acquired near-bottom with the MBARI mapping AUV in 2022 and with earlier with surface ships.

description: This gridded bathymetry data set was generated from severeal sources. High-resolution near-bottom swath bathymetry data was acquired in 2022 with a Reson SeaBat 7125 Multibeam sonar system on the MBARI Mapping AUV missions 20220830m1 and 20220906m2 that were conducted during IBRV Araon cruise ARA13C in the Beaufort Sea. Surface ship bathymetry was collected with a Kongsberg EM302 multibeam sonar system during the 2010 CCGS Amundsen ArcticNet UNB cruise, and with a Kongsberg EM2045 multibeam sonar system on CCGS Sir Wilfrid Laurier IOS cruise 2019-090.The files are in ESRI ASCII grid format, are unprojected in geographic coordinates, and were processed using the open-source multibeam sonar processing software MB-System. The grids have 2-meter horizontal resolution. Files with "TopoDiff" in the file name are difference grids in which bathymetry values from earlier surface ship surveys are substracted from the values collected during the 2022 near-bottom AUV surveys. The MB-SYSTEM and GMT commands that were used to generate these grids are given in the associated Figure.cmd file that can be downloaded with these grids. The AUV survey missions data was acquired as part of a collaborative research project between MBARI, the Geological Survey of Canada, and the Korea Polar Research Institute. Funding for the AUV mapping was provided from the David and Lucile Packard Foundation.
DOI: 10.6084/m9.figshare.24967941
title: Supplementary Material for: HPA1-29w genotyping and the foundation for the platelet apheresis registry in Jiangsu province of China by MassARRAY spectrometry

description: Introduction: This study aimed to investigate the allele frequencies of the human platelet antigens HPA-1-29w system in Jiangsu (China) and establish the platelet apheresis registry in blood donors. Methods: HPA genotyping was performed using the MassARRAY iPLEX® platform. Allele and genotype frequencies were estimated by direct counting and tested for Hardy–Weinberg equilibrium. The transfusion mismatch probability was calculated for every HPA specificity. Results: The HPA allele frequencies in the Jiangsu Han population of HPA-1b, -2b, -3b, -4b, -5b, -6b, -11b, -15b, and -21b were 0.0055, 0.0530, 0.4116, 0.0015, 0.0155, 0.0162, 0.0003, 0.5317, and 0.0070, respectively, in which a heterozygote of HPA-11a/b was first detected in China. Only allele a was detected for HPA-7-10w、-12-14w、-16-20w and -22-29w quasi-systems. The highest mismatch rate of HPA genes in 1640 platelet donors was the HPA-15 system, followed by the HPA-3 system with a rate of 37.4% and 36.71%, respectively. Conclusion: China’s largest-scale platelet registry of HPA-1-29w has been explored. The MassARRAY platform may help to found the platelet apheresis registry which would be useful to provide matching platelets and lead to a more accurate, effective, and safe transfusion for patients with platelet therapy.
DOI: 10.6084/m9.figshare.25515346
title: Supplementary Material for: Larger degree of renal function decline in CKD is a favorable factor for the attenuation of eGFR slope worsening by SGLT2 inhibitors: a retrospective observational study

description: Introduction: Sodium-glucose cotransporter 2 inhibitors (SGLT2Is) have beneficial effects on the renal function of chronic kidney disease (CKD) patients, although the types of patients suitable for this treatment remain unclear.
Methods: A retrospective observational study was conducted on CKD patients who were treated with SGLT2I at our department from 2020 to 2023. The estimated glomerular filtration rate (eGFR) just before treatment was defined as the baseline and the difference between pre-and post-treatment eGFR slopes were used to compare the improvement of renal function. Logistic regression analysis was used to evaluate the independent factors for its improvement.
Results: A total of 128 patients were analyzed (mean age: 67.2 years; number of women: 28 [22%]). The mean eGFR was 42.1 ml/min/1.73 m2, and urine protein was 0.66 g/gCr. The eGFR slopes of patients with an eGFR &lt; 30 ml/min/1.73 m2 were improved significantly after treatment (-0.28 to -0.14 ml/min/1.73 m2/month, P &lt; 0.001) but were worsened in patients with an eGFR ≥ 30 ml/min/1.73 m2. Logistic analysis for the improvement in eGFR slopes showed that women (odds ratio [OR], 5.63; 95% confidence interval [CI], 1.16 to 27.3; P = 0.03), use of mineral corticoid receptor antagonists (OR, 11.79; 95% CI, 1.05 to 132.67; P = 0.012) and rapid decline of eGFR before treatment (OR, 12.8 per ml/min/1.73 m2/month decrease in eGFR; 95% CI, 3.32 to 49.40; P &lt; 0.001) were significant independent variables.
Conclusion: SGLT2Is may have beneficial effects especially for rapid decliners of eGFR, including advanced CKD.
DOI: 10.6084/m9.figshare.26362102
title: Supplementary Material for: Central lean mass distribution and the risks of all-cause and cause-specific mortality in 40283 UK Biobank participants

description: Introduction 
The purpose of this study is to investigate the association of central lean mass distribution with the risk of mortality.
Methods
This cohort study included 40283 UK Biobank participants. Cox proportional hazards regression models were used to estimate the association of central lean mass distribution, i.e., trunk-to-leg lean mass ratio, assessed by dual energy X-ray absorptiometry, with the risk of mortality.
Results
The median age of the participants was 65 years and 52% were women. During a median follow-up of 4.18 years, 674 participants died, of whom 366 were due to cancer, and 126 were due to cardiovascular causes. Compared with the lowest tertile of a trunk-to-leg lean mass ratio, the multivariable-adjusted (age, sex, ethnicity, lifestyle, comorbidities, body mass index, and appendicular muscle mass index) hazards ratios of the highest tertile of trunk-to-leg lean mass ratio were 1.55 (95%CI, 1.23 - 1.94), 1.69 (95%CI, 1.26 - 2.26), and 1.14 (95%CI, 0.72 - 1.80) for all-cause, cancer and cardiovascular mortality, respectively. Neutrophil-to-lymphocyte ratio mediated 9.3% (95% CI, 3.3%-40.4%) of the association of trunk-to-leg lean mass ratio with all-cause mortality. There was evidence for additive interactions of trunk-to-leg lean mass ratio with older age and poor diet quality for all-cause mortality.
Conclusion
Trunk-to-leg lean mass ratio, assessed by dual energy X-ray absorptiometry, was positively associated with the risks of all-cause and cancer mortality, independent of general obesity and central obesity, in UK middle-aged and older adults. Central lean mass distribution may interact synergistically with aging, and poor diet quality to further increase the risk of death.