cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3zjzs9
title: Occurrence Download

description: A dataset containing 360 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neltuma alba (Griseb.) C.E.Hughes & G.P.Lewis",
 "HasCoordinate is true",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 360 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007231-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17605/osf.io/bu52f
title: The effect of motor imagery practice with externally or internally focused cues in the absence of physical performance: A pilot study

description: Dataset used for the manuscript titled, "The effect of motor imagery practice with externally or internally focused cues in the absence of physical performance: A pilot study"
DOI: 10.15468/dl.ntm5fn
title: Occurrence Download

description: A dataset containing 790 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Odorrana schmackeri"
 ]
}

 The dataset includes 790 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007431-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.21655.84645
title: Bollettino sismico Regione Umbria 2017 per Google Earth
DOI: 10.5281/zenodo.17709462
title: Data for "Social and Spatial Affinity Drive Wound Care by Ants"

description: Dataset for the manuscript Social and Spatial Affinity Drive Wound Care by Ants by Ebi Antony George, Alba Motes-Rodrigo, Laurent Keller, Erik Frank.Preprint DOI: https://doi.org/10.1101/2025.10.08.681151

The zip file with the data contains the following sub-folders:



edgelists: csvs containing edgelists of social interactions from the automated tracking system for the various phases in the experiments

encounter_simulations: parquet files containing the results of simulations of wound care

encounters: csvs with all the encounters of nestmates with focal ants in the various phases in the experiments

focal_interactions: csvs containing data from manual observations of interactions of nestmates with the focal ants for the various phases in the experiments

interactions: csvs containiing a time ordered list of interactions used to create edgelists

replicateIDs: csvs containiing the IDs of the focal ants

social_maturity: cvs containing the social maturity of all ants obtained from the baseline 5 day phase in the experiments

trajectories: csvs containing the spatial coordinates of all ants (downsampled to 1Hz) in the various phases as well as the normalised counts of the presence of ants in a grid overlaid on the nest and foraging arenas (used to calculate spatial fidelity)


The zip files contain the data for all 6 colonies used in the experiments
DOI: 10.5281/zenodo.17709460
title: Data for "Social and Spatial Affinity Drive Wound Care by Ants"

description: Dataset for the manuscript Social and Spatial Affinity Drive Wound Care by Ants by Ebi Antony George, Alba Motes-Rodrigo, Laurent Keller, Erik Frank.Preprint DOI: https://doi.org/10.1101/2025.10.08.681151

The zip file with the data contains the following sub-folders:



edgelists: csvs containing edgelists of social interactions from the automated tracking system for the various phases in the experiments

encounter_simulations: parquet files containing the results of simulations of wound care

encounters: csvs with all the encounters of nestmates with focal ants in the various phases in the experiments

focal_interactions: csvs containing data from manual observations of interactions of nestmates with the focal ants for the various phases in the experiments

interactions: csvs containiing a time ordered list of interactions used to create edgelists

replicateIDs: csvs containiing the IDs of the focal ants

social_maturity: cvs containing the social maturity of all ants obtained from the baseline 5 day phase in the experiments

trajectories: csvs containing the spatial coordinates of all ants (downsampled to 1Hz) in the various phases as well as the normalised counts of the presence of ants in a grid overlaid on the nest and foraging arenas (used to calculate spatial fidelity)


The zip files contain the data for all 6 colonies used in the experiments
DOI: 10.15468/dl.cpzcdf
title: Occurrence Download

description: A dataset containing 131892 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((73.72598 22.35544,72.4733 20.42851,72.58223 19.40439,72.90902 18.37378,73.18134 17.18094,73.78044 15.66598,74.70634 13.92834,74.92419 12.76251,75.30544 11.9645,75.90455 11.05723,76.17687 9.77166,76.55812 8.80417,77.48401 7.83414,78.30098 8.80417,73.72598 22.35544))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lepidoptera"
 ]
}

 The dataset includes 131892 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007413-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q9t9m3
title: Occurrence Download

description: A dataset containing 2873463 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Year is 1980"
 ]
}

 The dataset includes 2873463 records from 555 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007395-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qcda8g
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "TaxonKey is Phytophthora ramorum"
 ]
}

 The dataset includes 149 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007432-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7hxe3n
title: Occurrence Download

description: A dataset containing 6651 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trimeresurus)",
 "Country is one of (China, India, Indonesia, Pakistan, Bangladesh, Japan, Philippines, Viet Nam, Türkiye, Iran (Islamic Republic of), Thailand, Myanmar, Korea, Republic of, Korea (Democratic People’s Republic of), Iraq, Afghanistan, Saudi Arabia, Uzbekistan, Malaysia, Yemen, Nepal, Sri Lanka, Kazakhstan, Syrian Arab Republic, Cambodia, Jordan, Azerbaijan, United Arab Emirates, Tajikistan, Israel, Lao People’s Democratic Republic, Lebanon, Kyrgyzstan, Turkmenistan, Singapore, Oman, Palestine, State of, Kuwait, Georgia, Mongolia, Armenia, Qatar, Bahrain, Timor-Leste, Cyprus, Bhutan, Maldives, Brunei Darussalam)",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2025",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 6651 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007433-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/wvqldm
title: ResiduesAvailabilityCompositionConversionPentials Published2024-05-14.tab

description: Datasets on residues volumes, compositions and estimates of production potentials
DOI: 10.57745/g03luu
title: EstimatesAgriResiduesYieldsToProductsAndEnvirPerformance 2025.xlsx

description: Estimates of availability of volumes of agri-residue streams in Europe and China, their estimated yields in 'destinations' to biopolymers, proteins and some other products and associated environmental impacts.
DOI: 10.57745/tajz1l
title: ResiduesAvailabilityCompositionConversionPentials Published2024-11-28.tab

description: Data for and of estimates of potential of protein, biopolymers and some other products production from agri-residues based on compositional information and volumes of the residual streams. 
Estimates are based on data on volumes of crop and processed products production in geographic areas, estimates of associated residual streams and conversion/extaction ratios.

Updates: 
- extension of the set of residue streams and geographic scope 
- further completion of compositional information of agri-residues streams
- extension of set of applications
DOI: 10.57745/vfgjjj
title: Estimates of residues volumes, compositions and of production potentials

description: Datasets on residues volumes, compositions and estimates of production potentials.
DOI: 10.15468/dl.z2rfrt
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Medicago polymorpha",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 106 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024737-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c93j9p
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Plectroniella Robyns"
 ]
}

 The dataset includes 191 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013788-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.beqc8g
title: Occurrence Download

description: A dataset containing 191394 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Living Specimen, Occurrence evidence, Specimen)",
 "Continent is South America",
 "Geometry POLYGON((-73.00283 13.33255,-78.68236 9.79226,-79.71501 3.12655,-85.6527 -0.22799,-78.55328 -15.27523,-72.22835 -20.4334,-71.8411 -24.25293,-57.57756 -25.32208,-44.84759 -26.26839,-38.65815 -21.57847,-33.22353 -4.44046,-47.11202 2.04602,-56.77358 9.69885,-73.00283 13.33255))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lauraceae"
 ]
}

 The dataset includes 191394 records from 810 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016001-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30948491
title: Revised supplementary material_581240.docx

description: We demonstrate a compact, tunable, and topologically protected mechanism for refractive-index sensing, surpassing conventional surface plasmon resonance sensors and opening a route toward singularity-enhanced photonic devices.
DOI: 10.6084/m9.figshare.30948491.v1
title: Revised supplementary material_581240.docx

description: We demonstrate a compact, tunable, and topologically protected mechanism for refractive-index sensing, surpassing conventional surface plasmon resonance sensors and opening a route toward singularity-enhanced photonic devices.
DOI: 10.5061/dryad.d2h629q
title: Data from: Why has transparency evolved in aposematic butterflies? insights from the largest radiation of aposematic butterflies, the Ithomiini

description: Defended species are often conspicuous and this is thought to be an honest
 signal of defences, i.e. more toxic prey are more conspicuous. Neotropical
 butterflies of the large Ithomiini tribe numerically dominate communities
 of chemically-defended butterflies and may thus drive the evolution of
 mimetic warning patterns. Although many species are brightly coloured,
 most are transparent to some degree. The evolution of transparency from a
 warningly coloured ancestor is puzzling as it is generally assumed to be
 involved in concealment. Here we show that transparent Ithomiini species
 are indeed less detectable by avian predators (i.e. concealment).
 Surprisingly, transparent species are not any less unpalatable, and may in
 fact be more unpalatable than opaque species, the latter spanning a larger
 range of unpalatability. We put forth various hypotheses to explain the
 evolution of weak aposematic signals in these butterflies and other
 cryptic defended prey. Our study is an important step in determining the
 selective pressures and constraints that regulate the interaction between
 conspicuousness and unpalatability.
description: Phylogeny of 33
 Ithomiini speciesPhylogeny of the 33
 Ithomiini species used in the study and extracted from the 340 species
 Ithomiini phylogeny by Chazot et al. (accepted in Global Ecology and
 Biogeography)Phylo_Tree_Ithomiini_33spp.treesData of transparency & detectability of 33 Ithomiini species, and PA concentration and measures of unpalatability for 10 of these species1-Average transparency and detectability by avian predators (chromatic & achromatic contrast in just noticeable difference units [JNDs] for UVS- & VS-vision in large gap & forest shade light conditions) for the 33 Ithomiini species of the study. 2-Data for behavioural experiments with chicks to test unpalatability of 10 Ithomiini taxa (indicated in bold red in the first list) are also provided, including the number (& assigned colour ) of experimental pellets attacked at each trial (for a total of 12 trials per chick) for all 6 chicks tested for each butterfly species. 3-PA concentrations (μg/mg) measured for individual butterflies of the 10 selected taxa are also given.optical-chemical measures & chick trials.xlsx
DOI: 10.5281/zenodo.18390384
title: Supplementary Data for "Mapping the health harm of Bangladeshi brick kilns"

description: Code and data includes: emission factor compilation data from a literature review, gridded emissions data outputs for use in air quality models, configuration information for running GEOS-Chem, the sub-annual InMAP grid for Bangladesh, results from InMAP and GEOS-Chem, and code and data underlying figures used in the manuscript.
DOI: 10.5061/dryad.2v8rq57
title: Data from: Species sorting and mass effect along forest succession: evidence from taxonomic, functional, and phylogenetic diversity of amphibian communities

description: Species recovery after forest disturbance is a highly studied topic in the
 tropics, but considerable debate remains on the role of secondary forests
 as biodiversity repositories, especially regarding the functional and
 phylogenetic dimensions of biodiversity. Also, studies generally overlook
 how alpha and beta diversities interact to produce gamma diversity along
 successional gradients. We used a metacommunity approach to assess how
 species sorting (i.e., environmental filtering) and mass effect (i.e.,
 source‐sink dynamics) affect 14 complementary metrics of amphibian
 taxonomic, functional, and phylogenetic diversity along a successional
 gradient in southern Mexico. As amphibians have narrow environmental
 tolerances and low dispersal capabilities, we expected that species
 sorting may be relatively more important than mass effect in structuring
 amphibian communities. Between 2010 and 2012, we sampled frogs,
 salamanders, and caecilians in 23 communities distributed in four
 successional stages: young (2–5 years old) and intermediate (13–28 years
 old) secondary forests, old‐growth forest fragments, and old‐growth
 continuous forest. We assessed 15 ecologically relevant functional traits
 per species and used a time‐calibrated molecular phylogeny. We recorded
 1,672 individuals belonging to 30 species and 11 families. Supporting our
 expectations from the species sorting perspective, from the poorest
 (younger forests) to the best quality (continuous forest) scenarios, we
 observed (a) an increase in alpha diversity regardless of species
 abundances; (b) a clear taxonomic segregation across successional stages;
 (c) an increase in functional richness and dispersion; (d) an increase in
 mean phylogenetic distance and nearest taxon index; and (e) a reduction in
 mean nearest taxon distance. However, 10 species occurred in all
 successional stages, resulting in relatively low beta diversity. This
 supports a mass effect, where interpatch migrations contribute to prevent
 local extinctions and increase compositional similarity at the regional
 scale. Our findings indicate that amphibian metacommunities along forest
 successional gradients are mainly structured by species sorting, but mass
 effects may also play a role if high levels of forest cover are conserved
 in the region. In fact, secondary forests and forest fragments can
 potentially safeguard different aspects of amphibian diversity, but their
 long‐term conservation value requires preventing additional deforestation.
description: Species sorting and mass
 effect along forest succession- evidence from taxonomic, functional, and
 phylogenetic diversity of amphibian communitiesSites characterization
 (sheet 1) and Number of individuals for amphibian species per site.
 Taxonomic, functional and phylogenetic metrics calculated per each site
 (sheet 2).
DOI: 10.5061/dryad.8t267j0
title: Data from: Infection with Batrachochytrium dendrobatidis is common in tropical lowland habitats: implications for amphibian conservation

description: Numerous species of amphibians declined in Central America during the
 1980s and 1990s. These declines mostly affected highland stream amphibians
 and have been primarily linked to chytridiomycosis, a deadly disease
 caused by the chytrid fungus Batrachochytrium dendrobatidis (Bd). Since
 then, the majority of field studies on Bd in the Tropics have been
 conducted in midland and highland environments (&gt;800 m) mainly
 because the environmental conditions of mountain ranges match the range of
 ideal abiotic conditions for Bd in the laboratory. This unbalanced
 sampling has led researchers to largely overlook host–pathogen dynamics in
 lowlands, where other amphibian species declined during the same period.
 We conducted a survey testing for Bd in 47 species (n = 348) in four
 lowland sites in Costa Rica to identify local host–pathogen dynamics and
 to describe the abiotic environment of these sites. We detected Bd in
 three sampling sites and 70% of the surveyed species. We found evidence
 that lowland study sites exhibit enzootic dynamics with low infection
 intensity and moderate to high prevalence (55% overall prevalence).
 Additionally, we found evidence that every study site represents an
 independent climatic zone, where local climatic differences may explain
 variations in Bd disease dynamics. We recommend more detection surveys
 across lowlands and other sites that have been historically considered
 unsuitable for Bd occurrence. These data can be used to identify sites for
 potential disease outbreaks and amphibian rediscoveries.
description: Bd_lowlands_Costa_RicaInformation from sampled frogs and random points showing values from the WorldClim datasetAbiotic_environment_lowlands.txt
DOI: 10.5061/dryad.fc56203
title: Data from: Parental sublethal insecticide exposure prolongs mating response and decreases reproductive output in offspring

description: 1.Insecticide usage is steadily increasing, implying an ongoing threat of
 sublethal exposure for non‐target organisms in habitats close to farmland.
 The exposure to low insecticide doses is often associated with a fitness
 decline in affected organisms. 2. We determined the effects of exposure to
 the sublethal pyrethroid lambda‐cyhalothrin, at a concentration 20 times
 lower than the LC50, on the cuticle surface profile containing mating
 cues, the mating and aggression behaviour and fitness consequences for a
 beetle species (Phaedon cochleariae Fabricius), which faces agropollutants
 when occurring close to farmland. Traits were investigated in the
 insecticide‐exposed parental generation, and carry‐over effects into their
 unexposed offspring were studied. 3. In both the parental and the
 offspring generation, the chemical surface profile was unaffected by the
 insecticide exposure. Nevertheless, insecticide exposure and carry‐over
 effects decreased male mating acceptance of females in no‐choice
 situations. A reduced acceptance of insecticide‐exposed females may be
 related to changes in specific chemical surface cues, because males
 attempted to mate more readily with dummies treated with surface extracts
 of control females than of insecticide‐exposed females. Moreover, females
 became more aggressive in dual‐choice situations towards other females in
 the presence of an insecticide‐exposed compared to an unexposed male,
 potentially due to neuronal dysfunctions. Thus, both intersexual
 (chemical) communication during mating and intrasexual communication were
 altered in response to insecticide exposure. 4. Insecticide‐exposed
 parents and their offspring suffered from a decreased reproductive output,
 likely due to direct toxic effects or constraints induced by
 detoxification processes. The carry‐over effects might be mediated by a
 parental insecticide transfer or insecticide‐induced heritable epigenetic
 changes involved in detoxification processes. 5. Synthesis and
 applications. This study demonstrates that sublethal insecticide exposure
 can have far‐reaching consequences on (non‐target) herbivores. These
 results have implications for population dynamics and, ultimately, for
 ecological communities, as insects are highly important members of food
 chains. Therefore, long‐term effects of short‐term insecticide exposure
 should be considered in the evaluation of pesticides and the discussion
 about pesticide usage in agriculture.
description: Mueller_et_al_J_Appl_Ecol_dataall raw data for manuscript Mueller et al. 2019 in J Appl Ecol
DOI: 10.5061/dryad.pd3061s
title: Data from: Experimental evolution reveals divergence in female genital teeth morphology in response to sexual conflict intensity in a moth

description: The rapid evolutionary divergence of male genital structures under sexual
 selection is well documented. However, variation in female genital traits
 and the potential for sexual conflict to drive the coevolution between
 male and female traits has only recently received attention. In many
 lepidopterans females possess genital teeth (collectively, signa).
 Comparative studies suggest these teeth, involved in the deflation of
 spermatophores, may have coevolved with male spermatophore thickness via
 sexually antagonistic coevolution in a contest over the rate of deflation
 of spermatophores within the reproductive tract. We tested the hypothesis
 that sexual conflict should generate coevolution between genital teeth and
 spermatophore morphology by examining these traits under experimental
 manipulation of sexual conflict intensity. Using micro-CT scanning, we
 examined spermatophore and teeth morphology in populations of the Indian
 moth, Plodia interpunctella, which had been evolving for 110 generations
 under different adult sex-ratio biases. We found divergence in female
 signa morphology in response to sexual conflict: females from
 female-biased populations (reduced sexual conflict) developed wider signa.
 However, we found no evidence of coevolution between signa traits and
 spermatophore thickness as reported from comparative studies.
description: Sex conflict intensity
 and signa DRYADData showing the effect
 of sex-ratio bias on spermatophore thickness, signa width and height and
 CSP size. Relative male and female weight are included as
 covariates