cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13829024
title: Araneae families abundance in pitfall traps in sub project 7 in KiLi project

description: Abundances of spiders, resolution at least family level, FER2 was not sampled.

We sampled arthropod assemblages in disturbed and undisturbed vegetation types along an elevational gradient of 860–4550 m asl on the southern slopes of Mt. Kilimanjaro, Tanzania. On each site, ten pitfall traps were evenly spaced along two 50 m transects, with a distance of 10 m between individual traps and 20 m between transects. Pitfall traps were filled with 100–200 ml of a mixture of ethylene glycol and water (1:1 vol/vol) with a drop of liquid soap to break surface tension. Traps were exposed for 7 days each during two to five sampling events in both the dry and wet seasons between May 2011 and October 2012. As the number of individuals collected in ten traps was very high, we had to confine the sorting and subsequent analysis to sub-sets of at least three traps per sampling site and sampling event. Unfortunately, we had to find out later that the ethylen glycol procured locally was actually a mixture of ethylen glycol and 2-ethoxyethanol, which is a strong oxidizing chemical. Therefore, any sequencing of specimen caught in pitfall traps was impossible.

Haas, Michael. 2014. Master thesis. The influence of elevation on community composition and trophic position of spiders. University of Marburg

The KiLi project (2010-2018) is a German Science Foundation (DFG) funded research unit (DFG research unit FOR1246) that focuses on biodiversity and ecosystem processes along altitudinal and disturbance gradients on Mt. Kilimanjaro (Tanzania, Africa), capitalizing on its world-wide unique range of climatic and vegetation zones. The research unit comprises 2 central projects and 7 subprojects from various disciplines. On a total of 60 study sites in both natural and human-disturbed ecosystems biodiversity (e.g. plants, soil arthropods, ants, bees, frogs, lizards, bats, birds), related ecosystem processes (decomposition, seed dispersal, pollination, herbivory, predation), and biogeochemical processes and properties of ecosystems (climate, soil properties and nutrient status, regulation of water and carbon fluxes, trace gas emissions, primary productivity, functional diversity) are analyzed.
DOI: 10.5281/zenodo.13829025
title: Araneae families abundance in pitfall traps in sub project 7 in KiLi project

description: Abundances of spiders, resolution at least family level, FER2 was not sampled.

We sampled arthropod assemblages in disturbed and undisturbed vegetation types along an elevational gradient of 860–4550 m asl on the southern slopes of Mt. Kilimanjaro, Tanzania. On each site, ten pitfall traps were evenly spaced along two 50 m transects, with a distance of 10 m between individual traps and 20 m between transects. Pitfall traps were filled with 100–200 ml of a mixture of ethylene glycol and water (1:1 vol/vol) with a drop of liquid soap to break surface tension. Traps were exposed for 7 days each during two to five sampling events in both the dry and wet seasons between May 2011 and October 2012. As the number of individuals collected in ten traps was very high, we had to confine the sorting and subsequent analysis to sub-sets of at least three traps per sampling site and sampling event. Unfortunately, we had to find out later that the ethylen glycol procured locally was actually a mixture of ethylen glycol and 2-ethoxyethanol, which is a strong oxidizing chemical. Therefore, any sequencing of specimen caught in pitfall traps was impossible.

Haas, Michael. 2014. Master thesis. The influence of elevation on community composition and trophic position of spiders. University of Marburg

The KiLi project (2010-2018) is a German Science Foundation (DFG) funded research unit (DFG research unit FOR1246) that focuses on biodiversity and ecosystem processes along altitudinal and disturbance gradients on Mt. Kilimanjaro (Tanzania, Africa), capitalizing on its world-wide unique range of climatic and vegetation zones. The research unit comprises 2 central projects and 7 subprojects from various disciplines. On a total of 60 study sites in both natural and human-disturbed ecosystems biodiversity (e.g. plants, soil arthropods, ants, bees, frogs, lizards, bats, birds), related ecosystem processes (decomposition, seed dispersal, pollination, herbivory, predation), and biogeochemical processes and properties of ecosystems (climate, soil properties and nutrient status, regulation of water and carbon fluxes, trace gas emissions, primary productivity, functional diversity) are analyzed.
DOI: 10.6084/m9.figshare.27192897
title: Behavioral raw data recorded by HABITS autonomously

description: Mice are among the most prevalent animal models in neuroscience, leveraging the extensive physiological, imaging and genetic tools available for studying their brain. However, the development of new behavioral paradigms for mice has been laborious and inconsistent, impeding the investigation of complex cognition. Here, we present a home-cage assisted mouse behavioral innovation and testing system (HABITS), enables free-moving mice learn challenging cognitive behaviors in their home-cage without any human involvement. Supported by the microcontroller-based general programming framework, we have not only replicated established paradigms in current neuroscience research but also developed several novel paradigms previously unexplored in mice, resulting in more than 300 mice tested in various cognition functions. Through a machine-teaching approach, HABITS can comprehensively optimize the presentation of stimuli and modalities for trials, leading to more efficient training and higher-quality behavioral outcomes. To our knowledge, this is the first instance where mouse behavior has been systematically optimized by an algorithmic approach. Our results open a new approach for mouse behavior and demonstrate the novel and optimized cognitions to be investigated at the neural level.
DOI: 10.15468/dl.kej7pe
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agalychnis buckleyi (Boulenger, 1882)"
 ]
}

 The dataset includes 124 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004594-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13909137
title: ABDURASHID NURMURODOV ASARLARIDA URUSH ODAMI FENOMENI
DOI: 10.5281/zenodo.13909138
title: ABDURASHID NURMURODOV ASARLARIDA URUSH ODAMI FENOMENI
DOI: 10.48324/dandi.000776/0.241009.1509
title: Brain-wide representations of behavior spanning multiple timescales and states in C. elegans

description: Dataset of 38 worms from 'Brain-wide representations of behavior spanning multiple timescales and states in C. elegans'. Each NWB file contains the NIR bright-field images, GCaMP images, and NeuroPAL structural images, ROI locations and IDs, labeled activity traces, and behavioral information.
DOI: 10.5281/zenodo.13828305
title: Araneae families in pitfall traps in sub project 7 in KiLi project

description: Spiders were identified and sorted at least to family level by Dr. Steffen Bayer, Senckenberg Research Institute, Frankfurt a.M., Germany. Spider samples were pitfall trap samples from the sampling rounds 2, 3, 4, and 6.

We sampled arthropod assemblages in disturbed and undisturbed vegetation types along an elevational gradient of 860–4550 m asl on the southern slopes of Mt. Kilimanjaro, Tanzania. On each site, ten pitfall traps were evenly spaced along two 50 m transects, with a distance of 10 m between individual traps and 20 m between transects. Pitfall traps were filled with 100–200 ml of a mixture of ethylene glycol and water (1:1 vol/vol) with a drop of liquid soap to break surface tension. Traps were exposed for 7 days each during two to five sampling events in both the dry and wet seasons between May 2011 and October 2012. As the number of individuals collected in ten traps was very high, we had to confine the sorting and subsequent analysis to sub-sets of at least three traps per sampling site and sampling event. Unfortunately, we had to find out later that the ethylen glycol procured locally was actually a mixture of ethylen glycol and 2-ethoxyethanol, which is a strong oxidizing chemical. Therefore, any sequencing of specimen caught in pitfall traps was impossible.

Haas, Michael. 2014. Master thesis. The influence of elevation on community composition and trophic position of spiders. University of Marburg

The KiLi project (2010-2018) is a German Science Foundation (DFG) funded research unit (DFG research unit FOR1246) that focuses on biodiversity and ecosystem processes along altitudinal and disturbance gradients on Mt. Kilimanjaro (Tanzania, Africa), capitalizing on its world-wide unique range of climatic and vegetation zones. The research unit comprises 2 central projects and 7 subprojects from various disciplines. On a total of 60 study sites in both natural and human-disturbed ecosystems biodiversity (e.g. plants, soil arthropods, ants, bees, frogs, lizards, bats, birds), related ecosystem processes (decomposition, seed dispersal, pollination, herbivory, predation), and biogeochemical processes and properties of ecosystems (climate, soil properties and nutrient status, regulation of water and carbon fluxes, trace gas emissions, primary productivity, functional diversity) are analyzed.
DOI: 10.5281/zenodo.13828306
title: Araneae families in pitfall traps in sub project 7 in KiLi project

description: Spiders were identified and sorted at least to family level by Dr. Steffen Bayer, Senckenberg Research Institute, Frankfurt a.M., Germany. Spider samples were pitfall trap samples from the sampling rounds 2, 3, 4, and 6.

We sampled arthropod assemblages in disturbed and undisturbed vegetation types along an elevational gradient of 860–4550 m asl on the southern slopes of Mt. Kilimanjaro, Tanzania. On each site, ten pitfall traps were evenly spaced along two 50 m transects, with a distance of 10 m between individual traps and 20 m between transects. Pitfall traps were filled with 100–200 ml of a mixture of ethylene glycol and water (1:1 vol/vol) with a drop of liquid soap to break surface tension. Traps were exposed for 7 days each during two to five sampling events in both the dry and wet seasons between May 2011 and October 2012. As the number of individuals collected in ten traps was very high, we had to confine the sorting and subsequent analysis to sub-sets of at least three traps per sampling site and sampling event. Unfortunately, we had to find out later that the ethylen glycol procured locally was actually a mixture of ethylen glycol and 2-ethoxyethanol, which is a strong oxidizing chemical. Therefore, any sequencing of specimen caught in pitfall traps was impossible.

Haas, Michael. 2014. Master thesis. The influence of elevation on community composition and trophic position of spiders. University of Marburg

The KiLi project (2010-2018) is a German Science Foundation (DFG) funded research unit (DFG research unit FOR1246) that focuses on biodiversity and ecosystem processes along altitudinal and disturbance gradients on Mt. Kilimanjaro (Tanzania, Africa), capitalizing on its world-wide unique range of climatic and vegetation zones. The research unit comprises 2 central projects and 7 subprojects from various disciplines. On a total of 60 study sites in both natural and human-disturbed ecosystems biodiversity (e.g. plants, soil arthropods, ants, bees, frogs, lizards, bats, birds), related ecosystem processes (decomposition, seed dispersal, pollination, herbivory, predation), and biogeochemical processes and properties of ecosystems (climate, soil properties and nutrient status, regulation of water and carbon fluxes, trace gas emissions, primary productivity, functional diversity) are analyzed.
DOI: 10.5285/ad233bd1-9e07-4729-bb3e-776e09a02a3a
title: Mathematical equations, tables, supplementary information and geochemical, radiogenic and stable Sr isotopic compositions of waters from Nepal rivers

description: Geochemical data, cations, anions and stable and radiogenic strontium isotope data of Nepali rivers collected in 2002 as part of a study now accepted for publication as Stevenson et al. in American Journal of Science. The data set also includes supplementary information with the analytical solutions to the reactive transport equations describing dissolution-reprecipitation reactions in a carbonate matrix, definition of symbols and references that accompany the paper. The paper is authored by Emily Stevenson, Kevin Burton, Ian Parkinson, Rachael James, Basak Kisakürek, Ed Tipper and  Mike Bickle.
DOI: 10.15468/dl.azhwmy
title: Occurrence Download

description: A dataset containing 198 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vulpes zerda (Zimmermann, 1780)",
 "Year 1980-2024"
 ]
}

 The dataset includes 198 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004598-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ru7nd
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ranunculus ternatus Thunb.",
 "Year 1970-2024"
 ]
}

 The dataset includes 115 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004597-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9kfirwq
title: Low-Altitude Photographic Transects of the Arctic Network of National Park Units and Selawik National Wildlife Refuge, Alaska, July 2013

description: This data release includes 5 child items with photos and videos taken during low altitude photo survey transects in northwest Alaska, July 2013. Three flight transects were conducted from small aircraft over the National Park Service's Arctic Network (ARCN; Bering Land Bridge National Preserve, Cape Krusenstern National Monument, Gates of the Arctic National Park and Preserve, Kobuk Valley National Park, and Noatak National Preserve) and the U.S. Fish and Wildlife Service's Selawik National Wildlife Refuge.
Child Item 1: "Flight Path GPS Logs and Browse Maps of Low-Altitude Transects of the Arctic Network of National Park Units and Selawik National Wildlife Refuge, Alaska, July 2013"
Child Item 2: "Nadir Photographs Taken During Low-Altitude Transects of the Arctic Network of National Park Units and Selawik National Wildlife Refuge, Alaska, July 2013"
Child Item 3: "Oblique Photographs Taken During Low-Altitude Transects of the Arctic Network of National Park Units and Selawik National Wildlife Refuge, Alaska, July 2013"
Child Item 4: "Nadir Videos Taken During Low-Altitude Transects of the Arctic Network of National Park Units and Selawik National Wildlife Refuge, Alaska, July 2013"
Child Item 5: "Oblique Videos Taken During Low-Altitude Transects of the Arctic Network of National Park Units and Selawik National Wildlife Refuge, Alaska, July 2013"
DOI: 10.15468/dl.9jmfmj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Reynoutria",
 "Geometry POLYGON((48.11 16.12, 48.11 16.62, 48.5 16.62, 48.5 16.12, 48.11 16.12))",
 "Year is 2021"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004599-241007104925546/datasets/export for details.
DOI: 10.15468/dl.2yyy2p
title: Occurrence Download

description: A dataset containing 3334 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arthropoda",
 "MediaType is Image",
 "Country is one of (Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Cyprus, Czechia, Denmark, Estonia, Finland, France, Germany, Greece, Hungary, Iceland, Ireland, Italy, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Sweden, Switzerland, Türkiye, Ukraine, United Kingdom of Great Britain and Northern Ireland, Holy See)",
 "Year is 2017",
 "Month is December"
 ]
}

 The dataset includes 3334 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004600-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rg43hp
title: Occurrence Download

description: A dataset containing 908 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Galax aphylla L."
 ]
}

 The dataset includes 908 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004601-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bg26kb
title: Occurrence Download

description: A dataset containing 64934 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Bombus pascuorum (Scopoli, 1763)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 30, 46 30, 46 68, -26 68, -26 30))"
 ]
}

 The dataset includes 64934 records from 328 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004596-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9xak3z
title: Occurrence Download

description: A dataset containing 3334 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arthropoda",
 "MediaType is Image",
 "Country is one of (Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Cyprus, Czechia, Denmark, Estonia, Finland, France, Germany, Greece, Hungary, Iceland, Ireland, Italy, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Sweden, Switzerland, Türkiye, Ukraine, United Kingdom of Great Britain and Northern Ireland, Holy See)",
 "Year is 2017",
 "Month is December"
 ]
}

 The dataset includes 3334 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004604-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15139/s3/w2alpw
title: Replication Data for: Effects of simulated smoke condensate generated from combustion of selected military burn pit contents on human airway epithelial cells

description: Background: Exposure to military burn pit smoke during deployment is associated with different respiratory and non-respiratory diseases. However, information linking smoke exposure to human pulmonary health is lacking. This study examined the effects of simulated burn pit smoke condensates on human airway epithelial cells (HAECs) from twelve donors (smokers/non-smokers, biological female/male) cultured at an air-liquid interface and exposed to condensates from three simulated burn pit waste materials (cardboard, plywood, and plastic) incinerated at two combustion conditions: smoldering and flaming. Cellular gene expression was analyzed using bulk RNA sequencing, and basolateral media cytokine levels were assessed using multiplex immunoassay. Results: Flaming smoke condensates caused more significant differentially expressed genes (DEGs) with plywood flaming smoke being the most potent in altering gene expression and modulating cytokine release. Cardboard and plywood flaming condensates primarily activated detoxification pathways, whereas plastic flaming affected genes related to anti-microbial and inflammatory responses. Correlation analysis between smoke condensate chemicals and gene expression to understand the underlying mechanism revealed crucial role of oxygenated polycyclic aromatic hydrocarbons (PAHs) and aluminum, molybdenum, and silicon elements; IL6 expression was positively correlated with most PAHs. Stratification of data based on HAEC donor demographics suggests that these affect gene expression changes. Enrichment analysis indicated similarity with several deployment-related presumptive and reported diseases, including asthma, emphysema, and cancer of different organs. Conclusions: This study highlights that simulated burn pit smoke exposure of HAECs causes gene expression changes indicative of deployment-related diseases with more pronounced effects seen in smokers and females. Future studies are needed to further characterize how sex and smoking status affect deployment-related diseases.
DOI: 10.48324/dandi.000715/0.241009.1514
title: NeuroPAL: Atlas of C. elegans neuron locations and colors in NeuroPAL worm

description: 10 original NeuroPAL datasets used to train the statistical atlas in 'Statistical Atlas of C. elegans Neurons' and 'NeuroPAL: A Multicolor Atlas for Whole-Brain Neuronal Identification in C. elegans.
DOI: 10.15468/dl.urnp44
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-101.89235 29.73184,-45.67422 29.73184,-45.67422 52.23184,-101.89235 52.23184,-101.89235 29.73184))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Paranais frici Hrabĕ, 1941"
 ]
}

 The dataset includes 20 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004605-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.un5pqv
title: Occurrence Download

description: A dataset containing 231415 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Entoloma P.Kumm., 1871"
 ]
}

 The dataset includes 231415 records from 630 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004572-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9juehy
title: Occurrence Download

description: A dataset containing 2249 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Artocarpus heterophyllus Lam."
 ]
}

 The dataset includes 2249 records from 142 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021399-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.raf7jd
title: Occurrence Download

description: A dataset containing 306 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plestiodon callicephalus (Bocourt, 1879)"
 ]
}

 The dataset includes 306 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0285326-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.