cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21223/bv8e4p/h6vvc8
title: Caj-118.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/m9kkmk
title: Caj-113.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/7kgrz7
title: Caj-100.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/6qubum
title: Caj-069.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/c6rsme
title: Caj-123.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/lbzues
title: Caj-106.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/qbi1mq
title: Caj-097.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/bxcvfz
title: Caj-080E.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/loir24
title: Caj-043.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/yd1bj8
title: Caj-060B.clean.fq.gz

description: :unav
DOI: 10.21223/bv8e4p/lmaayu
title: 01result_Caj001-065.rar

description: :unav
DOI: 10.21223/bv8e4p/eoxfbz
title: 02result_Caj066-130C.rar

description: :unav
DOI: 10.21223/bv8e4p/ymh0dm
title: 03PhotosCajExtras.rar

description: :unav
DOI: 10.25919/9c3j-8t22
title: Parkes observations for project P1061 semester 2020OCTS_14

description: Fast Radio Bursts (FRBs) have extremely high brightness temperature, owing to their short-duration and prominent flux from the distant universe. The studies on emission mechanism of FRBs have met bottleneck for a long time unless a complete spectrum is measured. We propose to observe a new repeating FRB source, FRB 180301, using the Parkes ultra-wide-bandwidth receiver (UWL). This source was initially found by Parkes multibeam receivers and confirmed repetition by the FAST telescope. The source is still active until Jun 2020 from FAST follow-ups. It’s an ideal opportunity to capture comprehensive spectral information using the Parkes UWL. We demonstrate that the beam coverage is feasible and 30-hr observations are required for at least one detection.
DOI: 10.21223/bv8e4p/sfrbci
title: 04report -Extras.txt

description: :unav
DOI: 10.21223/bv8e4p
title: Dataset for: Sequences of the Peruvian potato viroma from Cajamarca samples

description: The dataset of the Peruvian Potato Virome is organized in a webpage which includes photos (from field, plants, and collected leaves), field information, and molecular information (genome sequences) of the detected and identified viruses (known and unknown) which are necessary to better understand the diversity and distribution of viruses and their correlation with potato production in Peru. It is a basic line to monitoring changes of viral populations and the risk they represent for potato cultivation under a global warm. Link: http://potpathodiv.org/
DOI: 10.7277/4px7-e366
title: Seismically Induced Delayed-Landslides in Homogeneous Cohesive Slopes and Embankments (NEES-2007-0412)

description: &lt;p&gt;&lt;strong&gt;Title:&lt;/strong&gt; Seismically Induced Delayed-Landslides in Homogeneous Cohesive Slopes and Embankments (NEES-2007-0412)&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Year Of Curation: &lt;/strong&gt;2011&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Description: &lt;/strong&gt;Project is designed to track the pore pressure generation/dissipation as a function of varying shaking events. These pore pressure regimes are studied for their long term (multiple hours/days) contribution to instability in homogeneous normally consolidated clay slopes.&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Award: &lt;/strong&gt;http://www.nsf.gov/awardsearch/showAward?AWD_ID=0134370&lt;/p&gt; &lt;p&gt;&lt;strong&gt;PIs &amp; CoPIs: &lt;/strong&gt;Joseph Wartman&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Dates: &lt;/strong&gt;September 05, 2007 - December 12, 2008&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Organizations: &lt;/strong&gt;Drexel University, PA, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Facilities: &lt;/strong&gt;Drexel University, PA, United States,Rensselaer Polytechnic Institute, Troy, NY, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Sponsor: &lt;/strong&gt;NSF - 0134370&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Keywords: &lt;/strong&gt;Landslide, Clay, Pore Pressure, Centrifuge&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Publications: &lt;/strong&gt;&quot;Post-seismic Displacement Response in Normally Consolidated Clay Slopes&quot;&lt;/p&gt; &lt;nb:citations&gt;&lt;/nb:citations&gt;
DOI: 10.5284/1084711
title: Christ Church, New Houghton, Pleasley, Derbyshire. Historic Building Recording (OASIS ID: archaeol5-341071)

description: In January 2019, Archaeological Research Services Ltd was commissioned by Mr Stuart Hill to complete a Historic Building Recording in order to discharge a condition of planning permission granted by Bolsover District Council (planning application number 18/00293/FUL). The application is for the demolition of a late 19th century former church and subsequent erection of 4 residential dwellings, with associated groundworks, at Christ Church, New Houghton, Pleasley, Derbyshire. The report outlines and discusses the on-site historic building recording work carried out. This report also includes background research and a photographic survey record. The Historic Building Recording of Christ Church, New Houghton, has been conducted to Historic England Level 2 standard. It investigated the exterior and interior of the former church building and provided information relating to the history of the building and its development which can be summarised as follows Phase 1 - 1898 The Church of Christ Church is opened Phase 2 - c1898-1918 organ bay added Phase 3 - c1961 a new community centre building is linked to the north of the church.
DOI: 10.5281/zenodo.3901740
title: A meta analysis of Wikipedia's coronavirus sources during the COVID-19 pandemic

description: At the height of the coronavirus pandemic, on the last day of March 2020, Wikipedia in all languages broke a record for most traffic in a single day. Since the breakout of the Covid-19 pandemic at the start of January, tens if not hundreds of millions of people have come to Wikipedia to read - and in some cases also contribute - knowledge, information and data about the virus to an ever-growing pool of articles. Our study focuses on the scientific backbone behind the content people across the world read: which sources informed Wikipedia’s coronavirus content, and how was the scientific research on this field represented on Wikipedia. Using citation as readout we try to map how COVID-19 related research was used in Wikipedia and analyse what happened to it before and during the pandemic. Understanding how scientific and medical information was integrated into Wikipedia, and what were the different sources that informed the Covid-19 content, is key to understanding the digital knowledge echosphere during the pandemic. To delimitate the corpus of Wikipedia articles containing Digital Object Identifier (DOI), we applied two different strategies. First we scraped every Wikipedia pages form the COVID-19 Wikipedia project (about 3000 pages) and we filtered them to keep only page containing DOI citations. For our second strategy, we made a search with EuroPMC on Covid-19, SARS-CoV2, SARS-nCoV19 (30’000 sci papers, reviews and preprints) and a selection on scientific papers form 2019 onwards that we compared to the Wikipedia extracted citations from the english Wikipedia dump of <strong>May 2020</strong> (2’000’000 DOIs). This search led to 231 Wikipedia articles containing at least one citation of the EuroPMC search or part of the wikipedia COVID-19 project pages containing DOIs. Next, from our 231 Wikipedia articles corpus we extracted DOIs, PMIDs, ISBNs, websites and URLs using a set of regular expressions. Subsequently, we computed several statistics for each wikipedia article and we retrive Atmetics, CrossRef and EuroPMC infromations for each DOI. Finally, our method allowed to produce tables of citations annotated and extracted infromations in each wikipadia articles such as books, websites, newspapers. Files used as input and extracted information on Wikipedia's COVID-19 sources are presented in this archive. See the WikiCitationHistoRy Github repository for the R codes, and other bash/python scripts utilities related to this project.
description: Analysis on Wikipedia sources during the first wave of the COVID-19 pandemics (up to May 2020)
DOI: 10.5284/1084712
title: Land at Dale Head, Biggin by Hartington, Derbyshire. Archaeological Watching Brief (OASIS IS: archaeol5-384132)

description: Archaeological Research Services Ltd was commissioned by Simon Johnson in May 2019 to undertake a scheme of works relating to the proposed development at Dale Head, Liffs Road, Biggin by Hartington, Derbyshire. This development consists of the conversion of the former barn into holiday accommodation, extension of a single storey lean-to extension, demilition of an existing garage extension, erection of a two storey garage with ancillary accommodation and alteration of the driveway and parking with widening of the vehicle entrance. Work was carried out between the 27th and 31st January 2020. The work consisted of a continuous watching brief during ground works.
DOI: 10.5281/zenodo.4550727
title: datacleanr manuscript data sets

description: The data sets in the archive are used to generate figures for a research article introducing the datacleanr R application.
DOI: 10.5287/bodleian:dp7qeqyam
title: luox-2021-0003 deposition
DOI: 10.5281/zenodo.4382724
title: Kinematics of the exceptionally-short surge cycles of Sít' Kusá (Turner Glacier), Alaska, from 1983 to 2013

description: Data from: Nolan .... citation from the Journal of Glaciology.
description: file struc. to come.
DOI: 10.5281/zenodo.4382723
title: Kinematics of the exceptionally-short surge cycles of Sít' Kusá (Turner Glacier), Alaska, from 1983 to 2013

description: Data from: Nolan .... citation from the Journal of Glaciology.
description: file struc. to come.
DOI: 10.5284/1084713
title: St Peter's Church, Little Comberton, Worcestershire. Archaeological Watching Brief (OASIS ID: fieldsec1-250750)

description: An archaeological watching brief was undertaken on behalf of the Parish Church Council of St Peters Church, Little Comberton, Worcestershire (NGR SO 96699 42766; HER ref. WSM 67775). Remediation works were required following the collapse of the northern boundary wall of the churchyard. An emergency faculty was submitted to the Diocese of Worcester in order to carry out the remedial works. The works involved the removal of collapsed wall followed by the excavation and removal of existing foundations. The foundation trench was then modified and graded to accommodate a new section of wall and an associated French drain. A small ditch, aligned north-west to south-east, was recorded toward the centre of the trench, at an approximate right angle to the churchyard boundary. Pottery within the fill of ditch indicates a mid-1st-2nd century AD date for this feature, although an abraded residual sherd of Early to Middle Iron Age pottery of 5th-2nd centuries BC date was also recovered. The churchyard soil (101) contained fresh, unabraded sherds of later Roman pottery date (3rd-4th centuries). There is therefore earlier Roman activity within the site itself, later Roman activity within the immediate vicinity, and Early to Middle Iron Age activity in the wider area. At the western end of the trench was a substantial foundation constructed of squared Cotswold limestone blocks. Although no evidence for the original construction of this foundation wall was recovered, they are considered to relate to the School building identified in this corner of the churchyard on the 1st edition Ordnance Survey map of 1885, it underwent repairs in the latter half of the 19th century, and was demolished by 1904.
DOI: 10.5284/1084714
title: Wellingborough Grange, Wellingborough, Northamptonshire. Historic Building Recording (OASIS ID: 110archa1-401375)

description: A historic building recording was undertaken by 110 Archaeology at Wellingborough Grange. Scant firmly datable features before the Mid and late C19 building programmes suggest a long period of growth and the inevitable loss of fabric with each new rebuild and old furnishings were replaced and roofs were rebuilt with iron frames and clad with corrugated-sheets. Reused material supporting evidence elsewhere is informative. it is possible to glean information from the stonework despite ribbon-pointing on the house and barns. The study suggests that the original laithe house is medieval and a two-bay wing was added on the south side of the farmhouse in the late C16 or early C17 extending beyond the end of the old work, the cellar and the floor-frame over in the eastern bay is mostly extant. By the C18 the long original roof needed rebuilding and a cart shed and west range was added to the end of the old double barn, two foldyards were formed on the south by a middle range. Both ranges were remodelled as part of a major C19 refurbishment of the farm buildings. The farmhouse was rebuilt with a new Palladian inspired east front and an access drive contrived around the southeast side of the farm. The three-bay front is reflected at basement level where the C16/C17 cellar was shortened to allow space for the new middle bay, under the paved entrance hall, the two new cellars were brick vaulted. When these improvements had been made the farmstead compares favourably with new mid C19.model farms.
DOI: 10.5281/zenodo.4552068
title: Refractive index data for 150 nm Ag measured with ellipsometry

description: This is the refractive index data for 150 nm Ag thin film measured using the Sopra GES 5E spectroscopic ellipsometer. The data is extracted using the bulk calculation model of the WinEliII software. The incidence angle was 75 degrees, the analyzer was kept at 45 degrees. The film was deposited using e-beam evaporation technique in Lab 600H. The substrate used was silicon wafer of 525 microns thick. 2 nm of titanium was deposited initially as an adhesion layer and 1 nm of AgOx was deposited as the seed layer. It was followed by deposition of Ag (50 nm each for 3 times). The deposition rate of all the metals was 4 angstorm/sec with a base pressure of 1.5*10^(-6) mbar.
DOI: 10.5281/zenodo.4546559
title: Re-Analysis of F230/FishE eDNA Dataset PRJNA513845

description: I am uploading some re-processed data files for a post-publication review discussion. The discussion can be found here: https://www.nature.com/articles/s41598-019-42455-9#article-comments The code and analysis can be found here: https://github.com/cwarden45/PRJNA513845-eDNA_reanalysis
DOI: 10.5517/ccdc.csd.cc243zgq
title: CCDC 1970033: Experimental Crystal Structure Determination

description: Related Article: Andrea Pannwitz, Holden Saaring, Nataliia Beztsinna, Xinmeng Li, Maxime A. Siegler, Sylvestre Bonnet|2020|Chem.-Eur.J.|27|3013|doi:10.1002/chem.202003391
DOI: 10.5517/ccdc.csd.cc2667wk
title: CCDC 2031798: Experimental Crystal Structure Determination

description: Related Article: Siva Hariprasad Kurma, Balasubramanian Sridhar, China Raju Bhimapaka|2021|J.Org.Chem.|86|2271|doi:10.1021/acs.joc.0c02421
DOI: 10.5517/ccdc.csd.cc26pc5g
title: CCDC 2046315: Experimental Crystal Structure Determination

description: Related Article: Cui-Tian Wang, Ming Li, Ya-Nan Ding, Wan-Xu Wei, Zhe Zhang, Xue-Ya Gou, Rui-Qiang Jiao, Ya-Ting Wen, Yong-Min Liang|2021|Org.Lett.|23|786|doi:10.1021/acs.orglett.0c04018
DOI: 10.5287/bodleian:aezaxn1km
title: luox-2021-0002 deposition
DOI: 10.5281/zenodo.4549457
title: Dataset related paper "protocol for ems mutagenesis application in rice"

description: The aim of this study is to establish a standard protocol for EMS mutagenesis application in rice. Two studies were conducted to evaluate the effect of four rice seeds presoaking duration (0, 6, 12, and 24 hours), four EMS concentration doses (0.0%, 0.5%, 1.0%, and 2.0%), and four EMS exposure period (6, 12, 24, and 48 hours). Germination rate, plumula and radicle length, seedling survival, shoot length, root length and fresh seedling weight were evaluated.
DOI: 10.5281/zenodo.4549456
title: Dataset related paper "protocol for ems mutagenesis application in rice"

description: The aim of this study is to establish a standard protocol for EMS mutagenesis application in rice. Two studies were conducted to evaluate the effect of four rice seeds presoaking duration (0, 6, 12, and 24 hours), four EMS concentration doses (0.0%, 0.5%, 1.0%, and 2.0%), and four EMS exposure period (6, 12, 24, and 48 hours). Germination rate, plumula and radicle length, seedling survival, shoot length, root length and fresh seedling weight were evaluated.
DOI: 10.6084/m9.figshare.13590083
title: UDAMP

description: UDAMP is a comprehensive, human database of antimicrobial and immunomodulatory peptides containing all so far known human antimicrobial and immunomodulatory peptides.<br>
DOI: 10.6084/m9.figshare.13590083.v1
title: UDAMP

description: UDAMP is a comprehensive, human database of antimicrobial and immunomodulatory peptides containing all so far known human antimicrobial and immunomodulatory peptides.<br>
DOI: 10.5281/zenodo.4552188
title: Mass-radius relationships and fitted coefficients

description: This repository contains data of mass-radius curves for irradiated ocean planets, based on the connection of an interior structure model and an atmosphere model. This repository currently contains two files :<br> - mr_all.dat : all the generated internal structures giving the exact mass-radius relationships as presented in the online article.<br> - fit_coefficients.dat : coefficients obtained by fit on the mass-radius relationships.
DOI: 10.5281/zenodo.4552187
title: Mass-radius relationships and fitted coefficients

description: This repository contains data of mass-radius curves for irradiated ocean planets, based on the connection of an interior structure model and an atmosphere model. This repository currently contains two files :<br> - mr_all.dat : all the generated internal structures giving the exact mass-radius relationships as presented in the online article.<br> - fit_coefficients.dat : coefficients obtained by fit on the mass-radius relationships.
DOI: 10.7277/d2sr-rw64
title: Field Testing of a Non-ductile Reinforced Concrete Building in Turkey (NEES-2010-0929)

description: &lt;p&gt;&lt;strong&gt;Title&lt;/strong&gt;: Field Testing of a Non-ductile Reinforced Concrete Building in Turkey (NEES-2010-0929)&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Year Of Curation: &lt;/strong&gt;2013&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Description: &lt;/strong&gt;This project brings together the technical expertise and advanced testing capabilities of a group of researchers from the US and Turkey to provide unique data on behavior and performance of older reinforced concrete buildings. This type of construction comprises the majority of residential, public service (i.e., schools, hospitals), and commercial buildings in the industrial heartland of Turkey; and there are a significant number of similarly vulnerable buildings within more active seismic regions in the USA (e.g., California, Washington, Utah, South Carolina, etc). In California, the vulnerable buildings are typically pre-1973 vintage.&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Award: &lt;/strong&gt;http://www.nsf.gov/awardsearch/showAward?AWD_ID=0755333&lt;/p&gt; &lt;p&gt;&lt;strong&gt;PIs &amp; CoPIs: &lt;/strong&gt;Ertugrul Taciroglu, John Wallace&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Dates: &lt;/strong&gt;July 01, 2010 - December 15, 2010&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Organizations: &lt;/strong&gt;University of California, Los Angeles, CA, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Facilities: &lt;/strong&gt;University of California, Los Angeles, CA, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Sponsor: &lt;/strong&gt;NSF - 0755333&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Keywords: &lt;/strong&gt;health monitoring, system identification, vibration testing&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Publications: &lt;/strong&gt;&lt;br /&gt; Kutay Orakcal, Hilmi Lus, Erdal Safak, &quot;Ambient and Forced Vibration Testing of a Reinforced Concrete Building Before and After its Seismic Retrofitting&quot;&lt;/p&gt; &lt;nb:citations&gt;&lt;/nb:citations&gt;
DOI: 10.15468/vqyaax
title: Revision of the egg morphology of Eulimnadia (Crustacea, Branchiopoda, Spinicaudata)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Rabet, Nicolas (2010): Revision of the egg morphology of Eulimnadia (Crustacea, Branchiopoda, Spinicaudata). Zoosystema 32 (3): 373-391, DOI: 10.5252/z2010n3a1, URL: http://www.bioone.org/doi/abs/10.5252/z2010n3a1
DOI: 10.5281/zenodo.4362699
title: Confocal data of Bukhkalius lindae, holotype, NIGP166152

description: This dataset contains the raw confocal laser scanning microscopy (CLSM) slices for the holotype of <em>Bukhkalius lindae</em> (NIGP166152) from mid-Cretaceous Burmese amber. This dataset is associated with the publication "Revisiting the morphology and systematic placement of the enigmatic Cretaceous ommatid beetle <em>Bukhkalius lindae</em> (Coleoptera: Archostemata: Ommatidae)" (DOI:10.11606/1807-0205/2021.61.28). Confocal images were obtained with a Zeiss LSM710 confocal laser scanning microscope, using 488 nm Argon laser excitation line. Both original CZI files and exported TIFF stacks are provided.
DOI: 10.5281/zenodo.4362698
title: Confocal data of Bukhkalius lindae, holotype, NIGP166152

description: This dataset contains the raw confocal laser scanning microscopy (CLSM) slices for the holotype of <em>Bukhkalius lindae</em> (NIGP166152) from mid-Cretaceous Burmese amber. This dataset is associated with the publication "Revisiting the morphology and systematic placement of the enigmatic Cretaceous ommatid beetle <em>Bukhkalius lindae</em> (Coleoptera: Archostemata: Ommatidae)" (DOI:10.11606/1807-0205/2021.61.28). Confocal images were obtained with a Zeiss LSM710 confocal laser scanning microscope, using 488 nm Argon laser excitation line. Both original CZI files and exported TIFF stacks are provided.
DOI: 10.25345/c5rv33
title: MassIVE MSV000086915 - Crosslinking of XcpHIJK of T2SS
title: The type IV filament superfamily comprises widespread membrane-associated polymers in prokaryotes. The Type II secretion system (T2SS), a virulence pathway in many pathogens, belongs to this superfamily. A knowledge gap in understanding of the T2SS is the molecular role of a small pseudopilin protein. Using multiple biophysical techniques, we have deciphered how this missing component of the Xcp T2SS architecture is structurally integrated, and thereby unlocked its function. We demonstrate that low abundance XcpH is the adapter that bridges a trimeric initiating tip complex XcpIJK with a periplasmic filament of XcpG subunits. This data set, which contains the XL-MS data, constitues only a part of the full study.
DOI: 10.6084/m9.figshare.14024495
title: "Imposed motion datasets" from Steinmetz et al. Science 2021

description: Datasets underlying figure 3 of Steinmetz et al. Science 2021.<br>Datasets were spike sorted with Kilosort 2.5: https://github.com/MouseLand/Kilosort/releases/tag/v2.5<br>Each of the three zip files contains two raw electrophysiology data files, recorded simultaneously. One of the two was recorded with a NP1.0 probe ("p1") and the other was recorded with a NP2.0 probe ("p2"). <br>See the associated github repository for further details about the included files: https://github.com/nsteinme/steinmetz-et-al-2021
DOI: 10.5287/bodleian:xro2dd55e
title: 'Hangry’ Drosophila: food deprivation increases male aggression - data 2021
DOI: 10.7284/138460
title: Multibeam Echosounder data collected during research cruise FK200126 using a Kongsberg EM710 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition