cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/fe51799a303a8504c0562426fbc850c6
title: Bisley rainfall and throughfall, and chemistry of rainfall and throughfall

description: This data set contain summaries and analyses mean of collected weekly measurements expressed as mm per day, and calculation of fluxes, rates and means calculated after water chemistry analyses are conducted. Rainfall and throughfall are collected weekly at the Bisley LEF site. These data sets begin March 1988 and ends December 2003. Rain and throughfall samples are the total catch for the week, and are exposed to field conditions for that time. No event sampling is conducted on a routine basis. Rainfall Collected in Bisley (RCB) are bulk or always-open collectors that receive dry deposition by sedimentation. All samples are measured for pH and conductivity, and then filtered (pre-combusted Whatman GF/F glass fiber filter) prior to further analysis. From 1983-1994 samples were cooled and returned to the San Juan chemistry laboratory for analysis. During those years, samples for NH4 and NO3 analyses were refrigerated continuously until analysis. Sub samples for NH4 analysis were also preserved with 1 molar HCl. From 1994 on, samples for NH4 and NO3 were frozen until analysis, were not acidified, and all analyses were conducted at the University of New Hampshire. Nutrient fluxes in rainfall and throughfall were measured weekly in a mature subtropical wet forest in NE Puerto Rico over a 15-year period that included the effects of five hurricanes and several prolonged droughts. Annual inputs of K, Ca, Mg, Cl, Na, and SO4-S are similar to those reported from other marine-influenced tropical forests. Rainfall input of nitrogen is comparatively low and reflects the relative isolation of the air shed. Mean annual rainfall and throughfall were 3482 and 2131 mm yr-1 respectively. On average, rainfall, throughfall, rainfall pH, and rainfall flux NH4-N and NO3-N had small but significant decreases throughout the study period. More nutrients fluxes had seasonal differences in rainfall (6 out of 12) than throughfall (4 out of 12). All volume weighted enrichment ratios calculated for the 15-year period were greater than one. However, median weekly enrichment ratios were less than 1 for sea salts and dissolved organic carbon and between 1 and 2 for Mg, Ca, SiO2 and SO4-S. In contrast, median weekly enrichment ratios were greater than 10 for NH4-N, PO4-P, and K and reflect biological enrichment within the canopy. Droughts reduced enrichment ratios of cations and sea-salts, but increased enrichment ratios for NH4-N, PO4-P and K. In the weeks following hurricanes relative throughfall tends to be higher and enrichment ratios tend to be lower. These long-term observations indicate that physical and biological processes associated with water passing through the canopy act to buffer internal nutrient cycles from inter-annual, and seasonal variations in rainfall inputs.
DOI: 10.6073/pasta/03f58013909c3ce4482d1333dc813279
title: Plant aboveground biomass data: Long-Term Nitrogen Deposition During Grassland Succession

description: The purpose of this experiment is to measure how initially disturbing an area and adding nitrogen over a long time will affect the number of species, the type of species present, the amount of annual growth, and the change from year to year in the growth of each species in a plant community which is also relieved of grazing by large and small mammals. This experiment is conducted within fields (A, B, and C) which were initially low in soil nutrients. The ground was disturbed by thoroughly disking the area prior to establishment of the experiment. There are 8 different levels of nitrogen addition with other nutrients added to ensure that nitrogen remains the limiting nutrient, and a control which receives no nutrients. Nitrogen fertilizer (NH4NO3) is applied twice per year, once in early May and once in late June. There are six replicates of each treatment per field. The treatments were randomly assigned to plots of size 4 by 4 meters. The plots are in 6 plot by 9 plot grids with 1 meter aisles between plots. The plot grids are enclosed by a fence to keep out mammalian herbivores. Gophers are trapped and removed as they appear. In the spring of 1992, subexperiments E097 and E098 were established. E097 is in fields A and C where randomly selected plots within each treatment no longer receive fertilizer. E098 is in field B where randomly selected plots within each treatment are burned. Note that the design of E002 is similar to E001 except E002 was thoroughly disked prior to establishment.
DOI: 10.6073/pasta/ec929b4fec86eaf676d2a293694175d2
title: Plant aboveground biomass data: BioCON : Biodiversity, Elevated CO2, and N Enrichment

description: BioCON (Biodiversity, CO2, and Nitrogen) is an ecological experiment started in 1997 at the University of Minnesota's Cedar Creek Ecosystem Science Reserve. BioCON's goal is to explore the ways in which plant communities will respond to three environmental changes that are known to be occurring on a global scale: increasing nitrogen deposition, increasing atmospheric CO2, and decreasing biodiversity. Why Biodiversity, CO2, and Nitrogen? While there are many uncertainties in global change biology, there are also some well documented facts. Some of these are: 1. The amount of carbon dioxide (CO2) in the atmosphere is rising. Since the industrial revolution, the CO2 concentration in the atmosphere has increased from approximately 275 parts per million (ppm) to about 378 ppm today. This has been largely the result of fossil fuel burning. It is expected that CO2 levels will continue to rise, and that by the year 2050 these levels will be approximately 550 ppm. CO2 is the raw material for photosynthesis and is known to affect plant growth and development. 2. The amount of nitrogen moving through terrestrial ecosystems has increased in the recent past. While natural "background" levels of nitrogen fixation have remained constant, human additions to the system through fertilizer production and fossil fuel use have increased dramatically. Nitrogen is a key nutrient for plant growth and plays a critical role in plant community structure and composition in many environments. 3. Biodiversity levels are falling. While the research and data are not as complete as they are for CO2 and nitrogen, data indicate that the number of species globally, is being reduced. Perhaps more important for ecosystem function, diversity levels on local to regional scales have fallen due to land use change, biotic invasion and many other drivers. While much is known about how each of these factors affects ecosystem functioning, many questions remain. There is also little data on how these issues affect each other, and what emergent qualities may arise when systems are exposed to these changes simultaneously. BioCON seeks to address these issues with this multi-year study at Cedar Creek Ecosytem Science Preserve.
DOI: 10.6073/pasta/85f4357d25255ed1373e4d2afeac4784
title: Aspen Fungal Canker Inventory at Previoulsy Established Monitoring and Inventory Plots Across Interior Alaska, Sampled 2016-2018

description: This dataset contains characterization of 88 study sites and inventory data for individual trees at these study sites recorded between 2016-2018. Canker was inventoried within previously established networks of long-term monitoring and inventory plots scattered across interior Alaska, and within additional sites selected specifically for this study. These included sites within the Bonanza Creek (BNZ) Experimental Forest (BCEF), and sites within the BNZ Regional Site Network (RSN), both maintained by the BNZ Long-Term Ecological Research program (BNZ LTER). We also surveyed plots within the Cooperative Alaska Forest Inventory (CAFI) network, a network of 203 sites representing a wide range of mature boreal forest stands scattered across interior and south-central Alaska including the Kenai Peninsula.
DOI: 10.6075/j0dz067f
title: Plant-pollinator interaction networks in coastal sage scrub reserves and fragments in San Diego

description: Data here describe the interactions between plants and putative pollinators in large natural reserves (area &gt; 500 ha; n = 6) and small habitat fragments (area &lt; 60 ha; n = 6) of coastal sage scrub habitat (see Study plots data tab). Data were collected in the spring and summer of 2015 and 2016. Values in the "Frequency" column of the interaction data tables (see Interactions 2015 and Interactions 2016 data tabs) correspond to the number of individual pollinators observed visiting flowers of each plant species, NOT the number of visitation events (i.e., contacts made between pollinators and plants). Full names of plant species are given in the Plant codes data tab.
DOI: 10.6073/pasta/258a44fb9055163dd4dd4371b9dce945
title: Repeated synoptic watershed chemistry from three watersheds near Toolik Field Station, Alaska, summer 2016-2018

description: Data file describing repeated sampling of chemistry of distributed river water from the Kuparuk River, Oksrukuyik Creek, and Trevor Creek watersheds near Toolik Field Station, North Slope of Alaska. Data file includes sampling date, season, sampling point, subcatchment area, and resulting concentrations for a suite of solutes.
DOI: 10.6084/m9.figshare.16766797
title: Dataset from Machado et al. (2021) - Frontiers in Physiology. Triceps surae muscle-tendon properties as determinants of the metabolic cost in trained long-distance runners

description: Dataset from manuscript Machado et al. (2021). Triceps surae muscle-tendon properties as determinants of the metabolic cost in trained long-distance runners <br>
DOI: 10.6084/m9.figshare.16766797.v2
title: Dataset from Machado et al. (2021) - Frontiers in Physiology. Triceps surae muscle-tendon properties as determinants of the metabolic cost in trained long-distance runners

description: Dataset from manuscript Machado et al. (2021). Triceps surae muscle-tendon properties as determinants of the metabolic cost in trained long-distance runners <br>
DOI: 10.6084/m9.figshare.16766797.v1
title: Dataset from Machado et al. (2021). Triceps surae muscle-tendon properties as determinants of the metabolic cost in trained long-distance runners

description: Dataset from manuscript Machado et al. (2021). Triceps surae muscle-tendon properties as determinants of the metabolic cost in trained long-distance runners <br>
DOI: 10.6084/m9.figshare.15134877
title: SEARCH STRATEGY EXTENDED DATA

description: <b>This is a SEARCH STRATEGY EXTENDED DATA included in:</b> <b> </b> <b>Influence of electrical stimulation on peripheral nerve regeneration: a protocol for a systematic review</b><b><br></b><b>Enilton Mattos, Mateus dos Santos Viana, Alex Guedes, Abrahão Fontes Baptista</b> <b> </b> <br><b></b>
DOI: 10.17632/mfg2fwg8fm.1
title: Data of the Constructivist Practices in the Learning Environment survey from engineering undergraduates: An exploratory factor analysis

description: This is the dataset of a questionnaire on first-year engineering undergraduates’ perceptions of constructivist practices in the learning environment as well as demographic information. The questionnaire with a 5-Likert scale was adapted from previous studies. The sample consisted of 293 first-year engineering undergraduates in the southwest region of the United States. The online questionnaire was sent to participants who completed it voluntarily at the end of fall 2019. A total of 274 of 293 participants completed the questionnaire with a response rate of 93.515%.
DOI: 10.17632/pbs6vb86vb.1
title: 2mm Code

description: Source Code of 2mm.
DOI: 10.17632/dk4j7nhwdg.1
title: HIV Outbreak Investigation Larkana (HOIL) Pakistan

description: We hypothesized that there would be differences in exposure to parenteral, vertical and/or sexual transmission risk factors in children with HIV compared to age and sex matched neighbourhood controls in Larkana Pakistan.   
Our data showed association of HIV infection (cases) to history of more injections, blood transfusion, surgery, mothers being positive for HIV/dead and increased number of health facility visits. The predominant mode of transmission in these cases was parenteral, likely due to unsafe injections and poor blood safety.  
Data on exposure variables was collected through an interview (questionnaire) conducted by our team visiting the child at home. The mother of cases and controls were retested at home through rapid tests. 

Blood was collected or Hepatitis B and C serology (both cases and controls), HIV rapid testing (from controls only to confirm negative status) and HIV phylogeny (from cases only).
DOI: 10.17632/sdc374ww9t.1
title: Escape COVID-19 S1 2021 dataset

description: Dataset used in the study "Large Scale Deployment of a Serious Game Designed to Improve COVID-19 Infection Prevention Practices"
DOI: 10.17632/tvb47xhpy6.1
title: manuscript-starved&refed

description: datasets for manuscript-starved & refed
DOI: 10.5517/ccdc.csd.cc28db12
title: CCDC 2097213: Experimental Crystal Structure Determination

description: Related Article: Xiaohui Yuan, Nuonuo Zhang, Debao Liu, Cong Hu, Peng Su, Jiaying Yan, Kaibo Zheng|2022|Dyes Pigm.|197|109904|doi:10.1016/j.dyepig.2021.109904
DOI: 10.6084/m9.figshare.17014331
title: Extended Data Fig. 1.xlsx

description: unprocessed impedance data gathered from additional sample A1
DOI: 10.6084/m9.figshare.17014331.v2
title: Extended Data Fig. 1.xlsx

description: unprocessed impedance data gathered from additional sample A1
DOI: 10.6084/m9.figshare.17014331.v1
title: FigureS9.xlsx

description: unprocessed impedance data gathered from additional sample A1
DOI: 10.5281/zenodo.5703708
title: Transcriptional analysis of peripheral memory T cells reveals Parkinson's disease-specific gene signatures--Fluorospot SFC

description: Fluorospot SFC (combined IFNg, IL-5, and IL-10) data and corresponding HC-PD group IDs described in "Transcriptional analysis of peripheral memory T cells reveals Parkinson’s disease-specific gene signatures"
DOI: 10.5281/zenodo.5703707
title: Transcriptional analysis of peripheral memory T cells reveals Parkinson's disease-specific gene signatures--Fluorospot SFC

description: Fluorospot SFC (combined IFNg, IL-5, and IL-10) data and corresponding HC-PD group IDs described in "Transcriptional analysis of peripheral memory T cells reveals Parkinson’s disease-specific gene signatures"
DOI: 10.3886/e154721v1
title: Investigating the impact of at-home learning on secondary school aged children with ADHD: a qualitative study.

description: Students with ADHD can benefit from at-home learning in terms of managing their symptoms, however lockdown restrictions due to the pandemic are having negative impacts on the student population. This study was designed to ascertain how students with ADHD have been impacted by at-home learning under lockdown restrictions. An interpretative phenomenological analysis was conducted using semi-structured interviews from students, parents and teaching staff. These interviews were used to identify three main themes (anxiety caused by at-home learning, change in social interaction and academic impact of at-home learning) that best identified the participants experiences. The results suggested that whilst supportive home environments helped students with ADHD to better manage their symptoms, social anxiety was a significant problem and not all schools allowed students with ADHD to take full advantage of at-home learning for their students with ADHD.
description: Secondary School age children who experienced at-home learning during the lockdown of the Covid pandemic in 2020/2021.
DOI: 10.6084/m9.figshare.16766920
title: Western Blots

description: Western blot data for figs. 4-10
DOI: 10.6084/m9.figshare.17019623
title: Social media and civic engagement

description: Cross-national survey data collected in 2019.
DOI: 10.26180/17019638
title: radiation_calculation_output

description: Radiation output from RTM model
DOI: 10.26180/17019638.v1
title: radiation_calculation_output

description: Radiation output from RTM model
DOI: 10.6084/m9.figshare.15094194
title: Data_multiDimensional_landscape

description: This dataset contains biodiversity and landscape data of 100 US metropolitans and 1-km cells, relating to the paper Detecting biodiversity patterns across a multidimensional urban landscape for the journal Ecology Letters
DOI: 10.6084/m9.figshare.15094194.v4
title: Data_multiDimensional_landscape

description: This dataset contains biodiversity and landscape data of 100 US metropolitans and 1-km cells, relating to the paper Detecting biodiversity patterns across a multidimensional urban landscape for the journal Ecology Letters
DOI: 10.5281/zenodo.5703716
title: Excluding Code from Test Coverage (dataset)

description: This is the dataset for the paper "What Code Is Deliberately Excluded from Test Coverage and Why?", IEEE/ACM International Conference on Mining Software Repositories (MSR), 2021. This is the dataset for the paper "Excluding Code from Test Coverage: Practices, Motivations, and Impact", Empirical Software Engineering, 2021.
DOI: 10.5281/zenodo.4425357
title: Excluding Code from Test Coverage (dataset)

description: This is the dataset for the paper "What Code Is Deliberately Excluded from Test Coverage and Why?", IEEE/ACM International Conference on Mining Software Repositories (MSR), 2021. This is the dataset for the paper "Excluding Code from Test Coverage: Practices, Motivations, and Impact", Empirical Software Engineering, 2021.
DOI: 10.21979/n9/9ts3tr
title: PhD Thesis Data (Studies 1-4)

description: The following thesis data was collected, across four studies, from employee participants who were working full time in Singapore. Collectively, the data was used to examine and validate a prototype structure for the concept of workplace criers (i.e., employees who cry at work).
DOI: 10.21415/t5ms43
title: CHILDES Indonesian Jakarta Corpus
DOI: 10.6084/m9.figshare.16608511
title: Vibrational spectroscopy analysis of ligand efficacy in human M2 muscarinic acetylcholine receptor (M2R).xlsx

description: FTIR data will be analyzed by "IGOR Pro" software and statistical data could be analyzed by GraphPad Prism or another alternative software.
DOI: 10.6084/m9.figshare.16608511.v1
title: Vibrational spectroscopy analysis of ligand efficacy in human M2 muscarinic acetylcholine receptor (M2R).xlsx

description: FTIR data will be analyzed by "IGOR Pro" software and statistical data could be analyzed by GraphPad Prism or another alternative software.
DOI: 10.6084/m9.figshare.17005174
title: 3D code and datasets

description: 3Ddata.qda:1.KaleidaGraph data file2.Original data of 3D pore-network simulation results in all figures<br>3Dcode.nb:1.Mathematica notebook file2.3D pore-network simulations for single-phase flow3.The search algorithm based on the graph theory using scripts in Mathematica notebook
DOI: 10.6084/m9.figshare.17005174.v1
title: 3D code and datasets

description: 3Ddata.qda:1.KaleidaGraph data file2.Original data of 3D pore-network simulation results in all figures<br>3Dcode.nb:1.Mathematica notebook file2.3D pore-network simulations for single-phase flow3.The search algorithm based on the graph theory using scripts in Mathematica notebook
DOI: 10.6084/m9.figshare.17005168
title: 2D code and datasets

description: 2Ddata.qda:1.KaleidaGraph data file2.Original data of 2D pore-network simulation results in all figures<br>2Dcode.nb:1.Mathematica notebook file2.2D pore-network simulations for single-phase flow3.The search algorithm based on the graph theory using scripts in Mathematica notebook
DOI: 10.5281/zenodo.5703735
title: Ozone data set

description: Ground-level O<sub>3</sub> observation data during summertime (June–August) of 2014–2019 were retrieved from Beijing Municipal Ecological and Environmental Monitoring Center, ultimately comprising 31 air quality stations.
DOI: 10.5281/zenodo.5703734
title: Ozone data set

description: Ground-level O<sub>3</sub> observation data during summertime (June–August) of 2014–2019 were retrieved from Beijing Municipal Ecological and Environmental Monitoring Center, ultimately comprising 31 air quality stations.
DOI: 10.6084/m9.figshare.17019536
title: CYP2C19 genotype of 30 Chinese critically ill patients

description: CYP2C19 is one of the most important drug metabolizing enzymes in human body. The gene base is located in chromosome region 10q 24.2 and consists of 9 exons. CYP2C19 has many single nucleotide polymorphisms (SNPs), the most common of which are CYP2C19 * 2 and CYP2C19 * 3. CYP2C19 * 2 and CYP2C19 * 3 have high mutation rates in Asian populations. G / A mutation occurred at base 681 of CYP2C19 * 2 exon 5. G / A mutation occurred at base 636 of CYP2C19 * 3 exon 4. In this study, we detected the CYP2C19 genotype of the enrolled cases by using kit produced by Shanghai BaiO Technology Co. ltd. The 636 and 681 mutation sites were analyzed by gene chip technology. The genomic DNA of whole blood cells was extracted by the kit, the target fragments of CYP2C19 *1, *2, *3 polymorphic sites were amplified by PCR, and then hybridized with the probes on the gene chip, the chip was scanned and genotyped. The results of site mutation are shown in the Dataset.
DOI: 10.6084/m9.figshare.17019536.v1
title: CYP2C19 genotype of 30 Chinese critically ill patients

description: CYP2C19 is one of the most important drug metabolizing enzymes in human body. The gene base is located in chromosome region 10q 24.2 and consists of 9 exons. CYP2C19 has many single nucleotide polymorphisms (SNPs), the most common of which are CYP2C19 * 2 and CYP2C19 * 3. CYP2C19 * 2 and CYP2C19 * 3 have high mutation rates in Asian populations. G / A mutation occurred at base 681 of CYP2C19 * 2 exon 5. G / A mutation occurred at base 636 of CYP2C19 * 3 exon 4. In this study, we detected the CYP2C19 genotype of the enrolled cases by using kit produced by Shanghai BaiO Technology Co. ltd. The 636 and 681 mutation sites were analyzed by gene chip technology. The genomic DNA of whole blood cells was extracted by the kit, the target fragments of CYP2C19 *1, *2, *3 polymorphic sites were amplified by PCR, and then hybridized with the probes on the gene chip, the chip was scanned and genotyped. The results of site mutation are shown in the Dataset.
DOI: 10.6084/m9.figshare.14188862
title: Multipurpose temporal GIS model for cadastral data management

description: The data, codes and queries to accompany the paper "Multipurpose temporal GIS model for cadastral data management". Full details of the designs and use of queries are explained in the paper
DOI: 10.6084/m9.figshare.14188862.v2
title: Untitled item

description: The data, codes and queries to accompany the paper "Multipurpose temporal GIS model for cadastral data management". Full details of the designs and use of queries are explained in the paper
DOI: 10.6084/m9.figshare.13892861.v1
title: Appendix H

description: Appendix H: Genes that significantly changed in frequency during domestication.
DOI: 10.6084/m9.figshare.13893887.v1
title: Appendix J

description: Appendix J: Genes that significantly changed in frequency during breeding.
DOI: 10.6084/m9.figshare.13888754.v1
title: Appendix E.xlsx

description: Genes under domestication and breeding related selective sweeps. (NA, not applicable)
DOI: 10.6084/m9.figshare.13888754
title: Appendix F.xlsx

description: Appendix F: Genes under domestication and breeding related selective sweeps. (NA, not applicable)
DOI: 10.6084/m9.figshare.13888754.v3
title: Appendix F.xlsx

description: Appendix F: Genes under domestication and breeding related selective sweeps. (NA, not applicable)
DOI: 10.6084/m9.figshare.13888754.v2
title: Appendix F.xlsx

description: Appendix F: Genes under domestication and breeding related selective sweeps. (NA, not applicable)
DOI: 10.6084/m9.figshare.17012360
title: Han et al., ms. 2 raw data (Figshare).xlsx

description: Raw data on elemental, isotopic and optical compositions of dissolved organic matter and particulate organic matter in surface sediments and waters from different seasons in the Yangtze River margin and adjancenet sea. <br>