cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wb6nx7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Allium melliferum Traub"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012472-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/dw47mw86w6.1
title: Good And Bad Classification Of Ghugni

description: Data Description for Good and Bad Classification of Ghugni
This project focuses on developing a classification model for the quality assessment of Ghugni, a popular Indian snack made from dried peas or chickpeas, often flavored with spices and served as street food. The dataset contains 1000 samples, evenly divided into 500 "Good" and 500 "Bad" samples. The data is structured to support machine learning classification tasks to differentiate between good-quality and defective batches of Ghugni.

Data Overview:
Total Samples: 1000
Categories:
Good Ghugni: 500 samples
Bad Ghugni: 500 samples
Features:
Sensory Attributes:

Appearance: Bright yellow, uniform distribution of spices for good samples; dull color or uneven distribution for bad samples.
Texture: Soft, firm texture for good samples; excessively mushy or hard for bad samples.
Odor: Pleasant aroma for good samples; rancid or off-smell in bad samples.
Chemical Properties:

Moisture Content (%): Lower moisture levels for well-cooked samples; higher moisture levels for poorly cooked or spoilt samples.
pH Value: Optimal pH indicating freshness for good samples; deviations in spoiled samples.
Peroxide Value: Higher peroxide levels indicate rancidity, which is typically found in bad samples.
Microbial Analysis:

Total Plate Count (TPC) for microbial load
Presence of mold/yeast colonies
Nutritional Parameters (if available):

Protein, fat, and carbohydrate content comparison between good and bad samples.
Class Labels:
0: Bad Ghugni
1: Good Ghugni
Data Collection Process:
Samples were collected from different batches and vendors, ensuring diverse data representation.
Quality classification was conducted by trained sensory panels and verified through chemical and microbial analyses.
Data Preprocessing:
Missing values for chemical data were handled by imputation techniques.
Sensory scores were normalized to a common scale.
Outlier detection was performed to maintain data integrity.
Potential Use Case:
This dataset can be leveraged for building supervised learning models such as Logistic Regression, Decision Trees, or Neural Networks for quality control automation in food production. This project aims to ensure consumer safety and consistent product quality by predicting whether a batch of Ghugni meets quality standards.
DOI: 10.5281/zenodo.14803961
title: RNAmigos2: Fast and accurate structure-based RNA virtual screening with semi-supervised graph learning and large-scale docking data

description: Data, outputs, and models required for the rnamigos2 paper.Preprint:



RNAmigos2: Fast and accurate structure-based RNA virtual screening with semi-supervised graph learning and large-scale docking data


Juan G. Carvajal-Patiño, Vincent Mallet, David Becerra, L. Fernando Niño V., Carlos Oliver, Jérôme Waldispühl

bioRxiv 2023.11.23.568394; doi: https://doi.org/10.1101/2023.11.23.568394
DOI: 10.5281/zenodo.14803962
title: RNAmigos2: Fast and accurate structure-based RNA virtual screening with semi-supervised graph learning and large-scale docking data

description: Data, outputs, and models required for the rnamigos2 paper.Preprint:



RNAmigos2: Fast and accurate structure-based RNA virtual screening with semi-supervised graph learning and large-scale docking data


Juan G. Carvajal-Patiño, Vincent Mallet, David Becerra, L. Fernando Niño V., Carlos Oliver, Jérôme Waldispühl

bioRxiv 2023.11.23.568394; doi: https://doi.org/10.1101/2023.11.23.568394
DOI: 10.15468/dl.d6bpmy
title: Occurrence Download

description: A dataset containing 262 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leucaena pulverulenta (Schltdl.) Benth.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 262 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012473-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cpye8k
title: Occurrence Download

description: A dataset containing 499 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leucaena retusa Benth.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 499 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012474-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pv9p8s
title: Occurrence Download

description: A dataset containing 596 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lysiloma latisiliquum (L.) Benth.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 596 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012475-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jkdgzp
title: Occurrence Download

description: A dataset listing the 2 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Canada",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Ostrya Scop."
 ]
}

 The dataset's 2 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012407-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ra7bbb
title: Occurrence Download

description: A dataset containing 184777 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Canis lupus Linnaeus, 1758"
 ]
}

 The dataset includes 184777 records from 718 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012406-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27606408
title: xdm_individual_shrinkage_data.csv

description: This third file of the <i>XyloDensMap</i> collection provides the wood volumetric shrinkage measured on a subset of 23,828 wood cores, intended for their average estimation across the tree species, or a more sophisticated modelling approach accounting for individual tree/core attributes.
DOI: 10.15468/dl.kwnxed
title: Occurrence Download

description: A dataset containing 525 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paspalum wrightii Hitchc. & Chase"
 ]
}

 The dataset includes 525 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002274-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27606405
title: xdm_species_density_data.csv

description: This second file of the <i>XyloDensMap </i>collection provides statistics at species level for the mean weighted basic wood density.
DOI: 10.25346/s6/evwwlg/59ow5z
title: chr3.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 3
DOI: 10.25346/s6/evwwlg/iuwvd4
title: chr1.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 1
DOI: 10.25346/s6/evwwlg/niifuh
title: chr2.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 2
DOI: 10.25346/s6/evwwlg/uen1wt
title: chr5.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 5
DOI: 10.25346/s6/evwwlg/ymcl45
title: chr6.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 6
DOI: 10.25346/s6/evwwlg/8ggghm
title: chr22.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 22
DOI: 10.25346/s6/evwwlg/z6hrmi
title: chr20.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 20
DOI: 10.25346/s6/evwwlg/zvkrmy
title: chr21.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 21
DOI: 10.25346/s6/evwwlg/hzs1oo
title: chr17.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 17
DOI: 10.25346/s6/evwwlg/tjegtk
title: chr18.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 18
DOI: 10.25346/s6/evwwlg/v4puaj
title: chr19.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 19
DOI: 10.25346/s6/evwwlg/w8it4j
title: chr16.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 16
DOI: 10.25346/s6/evwwlg/0vfazx
title: chr15.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 15
DOI: 10.25346/s6/evwwlg/6quaoc
title: chr11.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 11
DOI: 10.25346/s6/evwwlg/xbusw9
title: chr12.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 12
DOI: 10.25346/s6/evwwlg/qvij17
title: chr13.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 13
DOI: 10.25346/s6/evwwlg/bddasb
title: chr14.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 14
DOI: 10.25346/s6/evwwlg/baiyux
title: chr8.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 8
DOI: 10.25346/s6/evwwlg/qpudeb
title: chr10.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 10
DOI: 10.25346/s6/evwwlg/p4qpui
title: chr7.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 7
DOI: 10.25346/s6/evwwlg/zrcfbp
title: chr9.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 9
DOI: 10.25346/s6/evwwlg/jsruy9
title: chr4.iHS.GeneticMap-AlkesGroupBroad.txt

description: iHS statistics for chromosome 4
DOI: 10.15468/dl.pfrd6k
title: Occurrence Download

description: A dataset containing 186 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Torreyochloa erecta (Hitchc.) Church"
 ]
}

 The dataset includes 186 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002276-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shz6ga
title: Occurrence Download

description: A dataset containing 3193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Eranthis Salisb."
 ]
}

 The dataset includes 3193 records from 205 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002275-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4bfyn5
title: Occurrence Download

description: A dataset containing 2250 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus saxatilis F.Cuvier, 1823"
 ]
}

 The dataset includes 2250 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002278-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18112/openneuro.ds005623.v1.0.0
title: test
DOI: 10.15468/dl.2dc7yy
title: Occurrence Download

description: A dataset containing 141 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Torreyochloa fernaldii (Hitchc.) Church"
 ]
}

 The dataset includes 141 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002280-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25346/s6/evwwlg
title: Data files for the manuscript entitled, "An abdominal obesity missense variant in the adipocyte thermogenesis gene TBX15 is implicated in adaptation to cold in Finns"

description: These are the genome-wide iHS statistics in the Finnish METSIM cohort for our paper Deal M, Kar A, Lee SHT, Alvarez M, Rajkumar S, Arasu UT, Kaminska A, Männistö V, van der Kolk B, Säiläkivi U, Saarinen T, Juuti A, Pihlajamäki J, Kaikkonen MU, Laakso M, Pietiläinen KH, Pajukanta P. An abdominal obesity missense variant in the adipocyte thermogenesis gene TBX15 is implicated in adaptation to cold in Finns. Further details of these iHS analyses can be found in the Methods and Results part of this paper.
DOI: 10.4121/29c209fa-f2a4-456d-9353-67cf81be1aaa.v1
title: Data belonging to the publication: A dynamic open-source model to investigate wake dynamics in response to wind farm flow control strategies

description: Dataset to recreate the plots from the publication "A dynamic open-source model to investigate wake dynamics in response to wind farm flow control strategies"The dataset contains different sets of data:Simulation data from OFF, SOWFA, and FLORISInput files to recreate the simulation data from OFFThe input wind direction time seriesFiles to recreate plots from the paper in MATLAB<br><strong>The simulation files</strong>These mainly contain the power of each turbine with the related time step.OFFnawa_grid_zp_*.csvFLORISfloris_nawea_grid_zp_*.csvSOWFAUnlike OFF and FLORIS, the SOWFA simulations only cover smaller subsets of the time frame (see paper).The time frames are decomposed into cases, named after the hours they cover:Time frame 1: 00_to_03Time frame 2: 06_to_09Time frame 3: 12_to_15The measurements are available under "case*_nacYaw" and "case*_powerGenerator".The wind farm layouts for each time frame are given as "Time_frame_*hrs_layout.csv".The wind direction simulated in LES is given as "Time_frame_*hrs_les_dir", which is an offset version of the original wind direction, which is given as "Time_frame_*hrs_original_dir.csv".<br><strong>OFF input files</strong>Named after the ki and phi lim settings, the input files can be found as .yaml files:nawea_grid_*.yamlThese also contain the original wind farm layout and the entire wind direction time series.<br><strong style="background-color:rgb(255, 250, 234);">Wind direction time series</strong>The LiDAR_*.csv files feature the LiDAR data used as wind direction signal, filtered and unfiltered, and the related time.The content of the files is given in rows of 600s data, which needs to be unfolded. See the time data for an intuition.<br><strong>MATLAB plotting scripts</strong>The main plotting script is called "compare_off_and_sowfa.m" and contains comments to guide the users through the data.The remaining .m files are used to generate specific plots or to load data.
DOI: 10.15468/dl.8gvdbp
title: Occurrence Download

description: A dataset containing 910873 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyperus L."
 ]
}

 The dataset includes 910873 records from 2813 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002176-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/gam9sr
title: New latest Famennian (Late Devonian) cystoporate bryozoans from the Bulongguoer section, northwest Xinjiang, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tolokonnikova, Zoya A., Song, Junjun, Zong, Ruiwen (2025): New latest Famennian (Late Devonian) cystoporate bryozoans from the Bulongguoer section, northwest Xinjiang, China. Zootaxa 5594 (2): 367-376, DOI: 10.11646/zootaxa.5594.2.8, URL: https://doi.org/10.11646/zootaxa.5594.2.8AbstractA diverse bryozoan fauna was identified from the upper member of the Hongguleleng Formation (Uppermost Famennian) in western Junggar, China. There are fenestrates, cryptostomates, trepostomates and cystoporates, including two new cystoporate species Cheilotrypa gongae sp. nov. and Cheilotrypa strunica sp. nov. It is the first record of Strunian bryozoans in Xinjiang. The assemblage includes previously known early Famennian taxa and new taxa for that region, which migrated into the Xinjiang basin from different shelves of Palaeotethys. The bryozoan fauna points to close palaeobiogeographical relations between Northwest China and Kazakhstan during the latest Devonian at species and genus level. At the genus level, bryozoans from Xinjiang and Kuznetsk basin, and south of Western Siberia are also similar.
DOI: 10.15468/ppamej
title: Coniolepiota alexandri (Agaricaceae, Basidiomycota), a new species in the formerly monotypic genus and a new record of C. spongodes, from Vietnam

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ivanova, Daria, Morozova, Olga, Pham, Thi Ha Giang (2024): Coniolepiota alexandri (Agaricaceae, Basidiomycota), a new species in the formerly monotypic genus and a new record of C. spongodes, from Vietnam. Phytotaxa 672 (3): 267-276, DOI: 10.11646/phytotaxa.672.3.4, URL: https://doi.org/10.11646/phytotaxa.672.3.4AbstractConiolepiota, a genus within the family Agaricaceae, described in 2011, has been considered monotypic, embracing one species, C. spongodes, distributed in tropical Asia. Based on the morphological study and molecular analysis, two species of Coniolepiota viz. C. spongodes and C. alexandri are recognized from Southern Vietnam. Coniolepiota spongodes, a new record to Bu Gia Map National Park (Binh Phuoc), possesses attractive lilac basidiomata of medium size with flocculose squamules, white spores, and T-shaped pileal elements. Coniolepiota alexandri, proposed as a new species from Cat Tien National Park (Dong Nai), shares all the features listed above but has a different colour (white) of basidiomata. Detailed descriptions of the new species and the new record are presented herein. Field photographs of the collected basidiomata, illustrations of the microscopic structures, and phylogenetic trees generated from datasets of nrITS and LSU sequences, are provided.
DOI: 10.15468/kapx4g
title: Sogana cysana sp. nov., a new tropiduchid planthopper from Chu Yang Sin National Park in Vietnam and key to Vietnamese species of the genus (Hemiptera: Fulgoromorpha: Tropiduchidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Constant, Jérôme, Pham, Thai Hong (2020): Sogana cysana sp. nov., a new tropiduchid planthopper from Chu Yang Sin National Park in Vietnam and key to Vietnamese species of the genus (Hemiptera: Fulgoromorpha: Tropiduchidae). Belgian Journal of Entomology 95: 1-13, DOI: 10.5281/zenodo.13739330AbstractA new species of Sogana Matsumura, 1914 S. cysana sp. nov. from Chu Yang Sin National Park in southern Central Vietnam, is described. Illustrations of the holotype and male genitalia are provided. Updated identification key and distribution map are provided for the six species of Sogana documented from Vietnam. The genus Sogana now contains 14 species.
DOI: 10.15468/wjm43v
title: Flora Helvetica - Elaeagnaceae

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Konrad Lauber, Gerhart Wagner, Andreas Gygax (2018): Flora Helvetica - Elaeagnaceae. In: Flora Helvetica. Bern: Haupt Verlag: 314, ISBN: 978-3-258-08047-5
DOI: 10.15468/7ay8gv
title: Identification of past and present gobies: distinguishing Gobius and Pomatoschistus (Teleostei: Gobioidei) species using characters of otoliths, meristics and body morphometry

description: This dataset contains the digitized treatments in Plazi based on the original journal article Cooper, David, Yamaguchi, Nobuyuki, Macdonald, David, Nanova, Olga, Yudin, Viktor, Dugmore, Andrew, Kitchener, Andrew (2020): Identification of past and present gobies: distinguishing Gobius and Pomatoschistus (Teleostei: Gobioidei) species using characters of otoliths, meristics and body morphometry. Contributions to Zoology 89 (1): 282-323, DOI: 10.1163/18759866-bja10002, URL: http://dx.doi.org/10.1163/18759866-bja10002AbstractGobies (Gobiidae + Oxudercidae) are among the largest groups of extant marine fishes. Fossils of gobies are abundant since the Miocene, and many species have been reported so far. However, delimitation of fossil goby species is challenging because molecular markers and diagnostic traits such as the disposition of sensory head papillae are lost. This study provides, for the first time, an actualistic framework for the identification of fossil goby species. We focus on characters that can in principle be recognized in fossils, and evaluate their ability to discriminate between extant goby species based on statistical analyses. Using 14 extant species of Gobius and seven species of Pomatoschistus, we conducted otolith morphometry, elliptic Fourier shape analysis of otoliths using the package ‘Momocs’, conventional fish morphometry, and meristic counts. In addition, the otoliths of all species are depicted based on SEM images and briefly described. Otolith Fourier shape analysis proved to be most efficient in discrimination of species within both genera, Gobius and Pomatoschistus. Several characters used in the other approaches also worked well, but the results were variable, and the relative taxonomic significance of particular variables tended to change depending on the species under consideration. We propose otolith shape analysis as a powerful tool to explore ancient goby species diversity when samples with abundant fossil otoliths are present. Overall, the herein presented data will greatly facilitate delimitation of fossil goby species in future studies, and will consequently shed new light on the evolution of goby diversity and biogeography through time.
DOI: 10.15468/q4vq3f
title: A new species of Hirtella (Chrysobalanaceae), and redescription of a closely related taxon, from the Atlantic Forest, Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Asprino, Renata Camargo, Amorim, André Márcio (2016): A new species of Hirtella (Chrysobalanaceae), and redescription of a closely related taxon, from the Atlantic Forest, Brazil. Phytotaxa 265 (3): 259-266, DOI: 10.11646/phytotaxa.265.3.6, URL: http://dx.doi.org/10.11646/phytotaxa.265.3.6AbstractHirtella prancei, a new species from the Brazilian Atlantic Forest, is described, illustrated and its morphological affinities with other species are discussed. The new species differs from the closely related H. hebeclada and H. santosii mainly by its indumentum on young branches and inflorescences, leaves that are usually larger with a bullate surface and greater number of secondary veins, and by its longer stipules and inflorescences. Hirtella prancei is only known from wet forests in southern Bahia State, Brazil. A more detailed morphological description and new data on distribution and habitat are also provided for H. santosii, which was based on an analysis of additional specimens.