cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.2pntxu
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canis lupus",
 "Country is Vanuatu",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026937-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17611/dp/16823466
title: Surface-Wave Radiation Patterns for May 17, 1993 MW 6.1 CENTRAL CALIFORNIA
DOI: 10.17611/dp/16823496
title: Surface-Wave Radiation Patterns for May 18, 1993 MW 6.7 PHILIPPINE ISLANDS REGION
DOI: 10.17611/dp/16823526
title: Surface-Wave Radiation Patterns for May 24, 1993 MW 6.9 JUJUY PROVINCE, ARGENTINA
DOI: 10.17611/dp/16823556
title: Surface-Wave Radiation Patterns for May 25, 1993 MW 6.1 ALASKA PENINSULA
DOI: 10.17611/dp/16823586
title: Surface-Wave Radiation Patterns for May 29, 1993 MW 6.3 NORTH ATLANTIC OCEAN
DOI: 10.17611/dp/16823616
title: Surface-Wave Radiation Patterns for June 08, 1993 MW 7.5 NEAR EAST COAST OF KAMCHATKA
DOI: 10.17611/dp/16823646
title: Surface-Wave Radiation Patterns for June 08, 1993 MW 6.3 SAN JUAN PROVINCE, ARGENTINA
DOI: 10.17611/dp/16823676
title: Surface-Wave Radiation Patterns for June 12, 1993 MW 6.1 IRIAN JAYA REGION, INDONESIA
DOI: 10.17611/dp/16823706
title: Surface-Wave Radiation Patterns for June 12, 1993 MW 6.2 NEAR EAST COAST OF KAMCHATKA
DOI: 10.17611/dp/16823736
title: Surface-Wave Radiation Patterns for June 18, 1993 MW 6.6 KERMADEC ISLANDS REGION
DOI: 10.17611/dp/16823766
title: Surface-Wave Radiation Patterns for June 30, 1993 MW 6.7 VANUATU ISLANDS REGION
DOI: 10.17611/dp/16823796
title: Surface-Wave Radiation Patterns for July 06, 1993 MW 6.3 EASTER ISLAND REGION
DOI: 10.17611/dp/16823826
title: Surface-Wave Radiation Patterns for July 11, 1993 MW 6.6 NEAR COAST OF NORTHERN CHILE
DOI: 10.17611/dp/16823856
title: Surface-Wave Radiation Patterns for July 22, 1993 MW 6.0 NORTHERN COLOMBIA
DOI: 10.17611/dp/16823886
title: Surface-Wave Radiation Patterns for August 03, 1993 MW 6.1 EGYPT
DOI: 10.17611/dp/16823916
title: Surface-Wave Radiation Patterns for August 04, 1993 MW 6.4 SOUTHERN SUMATRA, INDONESIA
DOI: 10.17611/dp/16823946
title: Surface-Wave Radiation Patterns for August 07, 1993 MW 6.4 NORTHEAST OF TAIWAN
DOI: 10.17611/dp/16823976
title: Surface-Wave Radiation Patterns for August 07, 1993 MW 6.7 SOUTH OF FIJI ISLANDS
DOI: 10.17611/dp/16824006
title: Surface-Wave Radiation Patterns for August 07, 1993 MW 6.3 HOKKAIDO, JAPAN REGION
DOI: 10.17611/dp/16824036
title: Surface-Wave Radiation Patterns for August 09, 1993 MW 7.0 HINDU KUSH REGION, AFGHANISTAN
DOI: 10.17611/dp/16824066
title: Surface-Wave Radiation Patterns for August 10, 1993 MW 6.9 OFF W. COAST OF S. ISLAND, N.Z.
DOI: 10.17611/dp/16824096
title: Surface-Wave Radiation Patterns for August 10, 1993 MW 6.4 OFF E. COAST OF N. ISLAND, N.Z.
DOI: 10.17611/dp/16824126
title: Surface-Wave Radiation Patterns for August 20, 1993 MW 6.1 NEW GUINEA, PAPUA NEW GUINEA
DOI: 10.17611/dp/16824156
title: Surface-Wave Radiation Patterns for September 01, 1993 MW 6.3 OFF W COAST OF NORTHERN SUMATRA
DOI: 10.17611/dp/16824186
title: Surface-Wave Radiation Patterns for September 03, 1993 MW 6.7 NEAR COAST OF CHIAPAS, MEXICO
DOI: 10.17611/dp/16824216
title: Surface-Wave Radiation Patterns for September 06, 1993 MW 6.6 NEW IRELAND REGION, P.N.G.
DOI: 10.17611/dp/16824246
title: Surface-Wave Radiation Patterns for September 07, 1993 MW 6.4 KERMADEC ISLANDS REGION
DOI: 10.17611/dp/16824276
title: Surface-Wave Radiation Patterns for September 10, 1993 MW 7.2 NEAR COAST OF CHIAPAS, MEXICO
DOI: 10.17611/dp/16824306
title: Surface-Wave Radiation Patterns for September 13, 1993 MW 6.3 KERMADEC ISLANDS REGION
DOI: 10.17611/dp/16824336
title: Surface-Wave Radiation Patterns for September 18, 1993 MW 6.1 AFGHANISTAN-TAJIKISTAN BORD REG.
DOI: 10.17611/dp/16824366
title: Surface-Wave Radiation Patterns for September 19, 1993 MW 6.4 NEAR COAST OF CHIAPAS, MEXICO
DOI: 10.17611/dp/16824396
title: Surface-Wave Radiation Patterns for September 22, 1993 MW 6.1 SOLOMON ISLANDS
DOI: 10.17611/dp/16824426
title: Surface-Wave Radiation Patterns for September 26, 1993 MW 6.3 W. CAROLINE ISLANDS, MICRONESIA
DOI: 10.17611/dp/16824456
title: Surface-Wave Radiation Patterns for September 27, 1993 MW 6.6 SOUTH ATLANTIC OCEAN
DOI: 10.17611/dp/16824486
title: Surface-Wave Radiation Patterns for September 29, 1993 MW 6.3 MINAHASSA PENINSULA, SULAWESI
DOI: 10.5061/dryad.q1p71q5q
title: Data from: Fungal pathogen species richness: why do some plant species have more pathogens than others?

description: Variation among plant species in the number of associated herbivore and
 pathogen species is predicted to fit a species-area relationship in which
 the area or biomass embodied by a plant species is a function of
 individual size and geographic range size. This hypothesis is tested using
 published estimates of geographic range, individual size, and species
 richness of fungal-pathogens for 490 plant species occurring in the United
 States and controlling for sampling intensity and phylogenetic effects.
 The number of pathogens found on a plant species increases with the
 metrics of plant species' area and/or habitat diversity and their
 effects are similar between gymnosperm and angiosperm lineages. The
 strength of this pattern across a diverse set of plant lineages suggests
 that accumulation and persistence of pathogen species on plant species are
 governed by the same processes among temperate plants.
description: Tip_species_DATAThis file contains data on body size (maximum individual height), sampling intensity (number of citations returned in WOS search of latin binomial), geographic range size (estimated using state and county reports), and number of recorded fungal pathogen species for each plant species used in the analysis. The first six columns give taxonomic data for each species including order, family, genus, and species. “WOScite” and “CI” are the number of citations and log (number of citations), respectively. “HtMeters” and “Loght1” are the untransformed and log-transformed values for plant species height in meters. “ANG-GYM” column describes which clade (angiosperm or gymnosperm) a plant species belongs to. Wither plant species are native to North America (native) and plant species functional group designations (Functional_group) are listed next. Columns N through T contain estimates of plant species geographic range size (km2) and log10-transformed values. State-based estimates are noted with “ST” in column title and county-based estimates with “Co”. Log-transformed values for county-based range estimates excluding Alaska are labeled “logSA48” and estimates including Alaska are labeled “logSA49”. “PSR” refers to pathogen species richness, i.e. the number of reported fungal pathogen species for each plant species. The log (PSR+1) values are listed in the column labeled “LogPSRp1”.fulltreeThis is a nexus file giving the phylogenetic relationships and time-based branch lengths among taxa used in this study
DOI: 10.5061/dryad.7vd0j
title: Data from: Speeding up growth: selection for mass-independent maximal metabolic rate alters growth rates

description: Investigations into relationships between life-history traits, such as
 growth rate and energy metabolism, typically focus on basal metabolic rate
 (BMR). In contrast, investigators rarely examine maximal metabolic rate
 (MMR) as a relevant metric of energy metabolism, even though it indicates
 the maximal capacity to metabolize energy aerobically, and hence it might
 also be important in trade-offs. We studied the relationship between
 energy metabolism and growth in mice (Mus musculus domesticus Linnaeus)
 selected for high mass-independent metabolic rates. Selection for high
 mass-independent MMR increased maximal growth rate, increased body mass at
 20 weeks of age, and generally altered growth patterns in both male and
 female mice. In contrast, there was little evidence that the correlated
 response in mass-adjusted BMR altered growth patterns. The relationship
 between mass-adjusted MMR and growth rate indicates that MMR is an
 important mediator of life histories. Studies investigating associations
 between energy metabolism and life histories should consider MMR, as it is
 potentially as important in understanding life history as basal metabolic
 rate.
description: Downs et al: metabolic
 rates and growth dataBasal metabolic rate,
 maximal metabolic rate, and body mass data for all mice used in the growth
 rate experiment from generation 10 of a selection experiment for high
 maximal metabolic rate. Treatment group information is also included.
 Please cite the original manuscript and this data set if
 used.Downs
 et al_Am Nat_growth experiment
 data_all.xlsxExample of annotated R
 code of model selection processFile contains an
 annotated example of the procedure for model selection we used to develop
 our statistical models. The example uses the data from the experiment to
 quantify growth rate. For a text summary of the model selection procedure
 and a description of the final, “best fit” model for each response
 variable please see Electronic Appendix B of "Speeding up growth:
 selection for mass-independent maximal metabolic rate alters growth
 rates" by Downs, Cynthia J., Brown, Jessi L., Wone, Bernard W. M.,
 Donovan, Eward R., Hayes, Jack P.Supporting Materials_Example
 annotated R code of model selection
 process.pdf
DOI: 10.5061/dryad.bq4nn
title: Data from: Regime shifts shorten food chains for mesopredators with potential sublethal effects

description: 1. Predator populations are in decline globally. Exploitation, as well as
 habitat degradation and associated changes in prey availability are key
 drivers of this process of trophic downgrading. In the short term,
 longevity and dietary adaptability of large-bodied consumers can mask
 potential sub-lethal effects of a changing prey base, producing a delayed
 effect that may be difficult to detect. 2. In coral reef ecosystems,
 regime shifts from coral- to algae-dominated states caused by coral
 bleaching significantly alter the assemblage of small-bodied reef fish
 associated with a reef. The effects of this changing prey community on
 reef-associated mesopredators remains poorly understood. 3. This study
 found that the total diversity, abundance and biomass of piscivorous
 mesopredators was lower on regime-shifted reefs than recovering reefs, 16
 years after the 1998 mass coral bleaching event. 4. We used stable isotope
 analyses to test for habitat-driven changes in the trophic niche occupied
 by a key piscivorous fishery target species on reefs that had
 regime-shifted or recovered following climatic disturbance. Using
 morphometric indices, histology, and lipid analyses, we also investigated
 whether there were sub-lethal costs for fish on regime-shifted reefs. 5.
 Stable isotopes demonstrated that fish from regime-shifted reefs fed
 further down the food chain, compared to recovering reefs. Lower densities
 of hepatocyte vacuoles in fish from regime-shifted reefs, and reduced
 lipid concentrations in spawning females from these reefs, indicated a
 reduction in energy stores, constituting a sub-lethal and potential
 delayed effect on populations. 6. Reduced energy reserves in mesopredators
 could lead to energy allocation trade-offs, and decreased growth rates,
 fecundity, and survivorship, resulting in potential population declines in
 the longer term.
description: Hempson.et.al_2017_FuncEcol_Data
DOI: 10.5061/dryad.ct6n2m1
title: Data from: A novel approach for predicting the probability of ignition of palaeofires using fossil leaf assemblages

description: Many metrics are used to predict and manage wildfires today, however it is
 difficult to directly apply these to past wildfires histories. Developing
 an approach that enables estimation of these fire metrics in the past
 would provide significant power in our ability to compare past fire risk
 with that of the modern day. We use the Climate Leaf Analysis Multivariate
 Programme (CLAMP) to estimate warm month mean temperature and annual mean
 relative humidity for a modern day leaf dataset and establish a novel
 methodology by which we can generate ‘pseudo-daily’ meteorological
 parameters to calculate the probability of ignition (P(I)), an aspect of
 the North American Fire Danger Rating System. We test this methodology on
 Tortonian aged fossil leaves (11.62-7.25 million years ago) from five
 sites across California, which reveals that the Tortonian was cooler and
 considerably more humid and that P(I) was lower during this time than in
 the region today.
description: Fossil leaf score
 sheetsFossil leaf score sheets
 for sites Alturas, Remington Hill, Table Mountain, Oakdale and Anaverde
 for use in CLAMP.SI file
 1.xlsxLists of fossil leaf
 species held at UCMPLists of the fossil leaf
 species held at UCMP for each of the fives sites used in our analysis,
 Alturas, Remington Hill, Table Mountain, Oakdale and
 Anaverde.SI
 File 2.xlsx
DOI: 10.5061/dryad.gm7gk
title: Data from: Paternal-specific S-allele transmission in sweet cherry (Prunus avium L.): the potential for sexual selection

description: Homomorphic self-incompatibility is a well-studied example of a
 physiological process that is thought to increase population diversity and
 reduce the expression of inbreeding depression. Whereas theoretical models
 predict the presence of a large number of S-haplotypes with equal
 frequencies at equilibrium, unequal allele frequencies have been
 repeatedly reported and attributed to sampling effects, population
 structure, demographic perturbation, sheltered deleterious mutations or
 selection pressure on linked genes. However, it is unclear to what extent
 unequal segregations are the results of gametophytic or sexual selection.
 Although these two forces are difficult to disentangle, testing S-alleles
 in the offspring of controlled crosses provides an opportunity to separate
 these two phenomena. In this work, segregation and transmission of
 S-alleles have been characterized in progenies of mixed donors and fully
 compatible pollinations under field conditions in Prunus avium. Seed set
 patterns and pollen performance have also been characterized. The results
 reveal paternal-specific distorted transmission of S-alleles in most of
 the crosses. Interestingly, S-allele segregation within any given paternal
 or maternal S-locus was random. Observations on pollen germination, pollen
 tube growth rate, pollen tube cohort size, seed set dynamics and
 transmission patterns strongly suggest post-pollination, prezygotic sexual
 selection, with male–male competition as the most likely mechanism.
 According to these results, post-pollination sexual selection takes
 precedence over frequency-dependent selection in explaining unequal
 S-haplotype frequencies.
description: Raw data for S-allele
 segregations, fruit set, and pollen performance analysesThere are 7 excel
 sheets: (1) meteorological data during the first 8 days after pollination.
 (2) fruit set analyses registered during the three year. (3) raw and
 summarized data of S-allele segregations for the first year. (4) raw and
 summarized data of S-allele segregations for the second year. (5)
 Summarized data of S-allele segregations for the third year. (6) Raw data
 of pollen tube growth kinetics and dynamics for the first and second year.
 (7) Raw data of pollen tube growth kinetics and dynamics for the third
 year.Data_Hedhly_etal_JEB_2016.xls
DOI: 10.5061/dryad.1rf75
title: Data from: Effective population size of malaria mosquitoes: large impact of vector control

description: Malaria vectors in sub-Saharan Africa have proven themselves very
 difficult adversaries in the global struggle against malaria. Decades of
 anti-vector interventions have yielded mixed results – with successful
 reductions in transmission in some areas, and limited impacts in others.
 These varying successes can be ascribed to a lack of universally effective
 vector control tools, as well as the development of insecticide resistance
 in mosquito populations. Understanding the impact of vector control on
 mosquito populations is crucial for planning new interventions and
 evaluating existing ones. However, estimates of population size changes in
 response to control efforts are often inaccurate because of limitations
 and biases in collection methods. Attempts to evaluate the impact of
 vector control on mosquito effective population size (Ne) have produced
 inconclusive results thus far. Therefore, we obtained data for 13-15
 microsatellite markers for over 1,500 mosquitoes representing multiple
 time points for seven populations of three important vector species –
 Anopheles gambiae, An. melas and An. moucheti in Equatorial Guinea. These
 populations were subjected to indoor residual spraying or long-lasting
 insecticidal nets in recent years. For comparison, we also analyzed data
 from two populations that have no history of organized vector control. We
 used Approximate Bayesian Computation to reconstruct their demographic
 history, allowing us to evaluate the impact of these interventions on the
 effective population size. In six of the seven study populations, vector
 control had a dramatic impact on the effective population size, reducing
 Ne between 55-87%, the exception being a single An. melas population. In
 contrast, the two negative control populations did not experience a
 reduction in effective population size. This study is the first to
 conclusively link anti-vector intervention programs in Africa to sharply
 reduced effective population sizes of malaria vectors.
description: DataSheetForDryadMicrosatellite data for the seven study populations. The excel file has seven sheets labeled by site corresponding to the study sites in the paper. The data is formatted as a two-column per locus format, and entered in the GENALEX template. For any questions regarding the data, please contact the corresponding author.
DOI: 10.5061/dryad.hf5rh
title: Data from: Tree-centric mapping of forest carbon density from airborne laser scanning and hyperspectral data

description: Forests are a major component of the global carbon cycle, and accurate
 estimation of forest carbon stocks and fluxes is important in the context
 of anthropogenic global change. Airborne laser scanning (ALS) data sets
 are increasingly recognized as outstanding data sources for high-fidelity
 mapping of carbon stocks at regional scales. We develop a tree-centric
 approach to carbon mapping, based on identifying individual tree crowns
 (ITCs) and species from airborne remote sensing data, from which
 individual tree carbon stocks are calculated. We identify ITCs from the
 laser scanning point cloud using a region-growing algorithm and
 identifying species from airborne hyperspectral data by machine learning.
 For each detected tree, we predict stem diameter from its height and
 crown-width estimate. From that point on, we use well-established
 approaches developed for field-based inventories: above-ground biomasses
 of trees are estimated using published allometries and summed within plots
 to estimate carbon density. We show this approach is highly reliable:
 tests in the Italian Alps demonstrated a close relationship between field-
 and ALS-based estimates of carbon stocks (r2 = 0·98). Small trees are
 invisible from the air, and a correction factor is required to accommodate
 this effect. An advantage of the tree-centric approach over existing
 area-based methods is that it can produce maps at any scale and is
 fundamentally based on field-based inventory methods, making it intuitive
 and transparent. Airborne laser scanning, hyperspectral sensing and
 computational power are all advancing rapidly, making it increasingly
 feasible to use ITC approaches for effective mapping of forest carbon
 density also inside wider carbon mapping programs like REDD++.
description: 52_training_ACS_plots_field_measured_treesField measured trees of the 52 angle count samplig plots used in the training phase.47_validation_plots_field_measured_treesField measured trees of the 47 fixed radius plots used in the validation phase.47_validation_plots_ITCs_delineatedITCs delineated in the 47 fixed radius plots used in the validation phase.
DOI: 10.34740/kaggle/dsv/14632286
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5061/dryad.99db2
title: Data from: Migration, mitochondria, and the yellow-rumped warbler

description: Discordance between mitochondrial and nuclear DNA has been noted in many
 systems. Asymmetric introgression of mitochondria is a common cause of
 such discordances, although in most cases the drivers of introgression are
 unknown. In the yellow-rumped warbler, evidence suggests that mtDNA from
 the eastern, myrtle warbler, has introgressed across much of the range of
 the western form, the Audubon's warbler. Within the southwestern
 United States myrtle mtDNA comes into contact with another clade that
 occurs in the Mexican black-fronted warbler. Both northern forms exhibit
 seasonal migration, whereas black-fronted warblers are nonmigratory. We
 investigated the link between mitochondrial introgression, mitochondrial
 function, and migration using novel genetic, isotopic, biochemical, and
 phenotypic data obtained from populations in the transition zone. Isotopes
 suggest the zone is coincident with a shift in migration, with individuals
 in the south being resident and populations further north becoming
 increasingly more migratory. Mitochondrial respiration in flight muscles
 demonstrates that myrtle-type individuals have a significantly greater
 acceptor control ratio of mitochondria, suggesting it may be more
 metabolically efficient. To our knowledge this is the first time this type
 of intraspecific variation in mitochondrial respiration has been measured
 in wild birds and we discuss how such mitochondrial adaptations may have
 facilitated introgression.
description: Locality, isotope,
 genetic and morphological dataYRWA_data_TOEWS_dryad.xls