cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11930061.v1
title: Synthesis, Characterization and Photocatalytic Activity of Au/SiO2@TiO2 Core-Shell Microspheres

description: By using HAuCl4 as the gold precursor, spherical Au@SiO2/TiO2 core-shell nanostructures were prepared with the sol-gel method and ethanol reflux. The preparation process was convenient and fast. The obtained samples were characterized by UV-Vis, X-ray diffraction (XRD), field emission scanning electron microscopy (FESEM), transmission electron microscopy (TEM), X-ray diffraction (XRD) and X-ray photoelectron spectroscopy (XPS), respectively. The results suggested that these spherical particles were in uniform distribution of particle size and with excellent monodispersity. Gold nanoparticles were successfully loaded on the core-shell structure, and TiO2 nanoparticles were functionalized. With the functionalization of gold nanoparticles, Au@SiO2/TiO2 nanoparticles showed excellent photocatalysis activity for the degradation of methyl orange. The possible mechanism of catalytic degradation was discussed in the paper.
DOI: 10.6084/m9.figshare.11930055.v1
title: Production of cuttings and nutrient export by Coffea canéfora in different periods in the Southwestern Amazon

description: ABSTRACT Cutting is the main vegetative propagation method used for the production of Coffea canephora plantlets. In this method, parent plants are conducted in a specific field, called clonal garden, which must be managed to produce clonal cuttings. The objective of this study was to evaluate the production of cuttings and the export of nutrients by Coffea canephora in different periods in the Southwestern Amazon. The experiment was carried out in a 6 × 3 split-plot scheme (repeated measures in time), consisting of the combination of six clonal Coffea canephora genotypes (plot) and three cutting collection periods (subplots). The genotypes were: C-057, C-088, C-089, C-125, C-130 and C-160; and the evaluation sampling times were January/2017, May/2017 and September/2017. The applied design was a completely randomized design with four repetitions. The dry season, from May to September, promotes lower orthotropic stem dry mass accumulation by Coffea canephora, but allows obtaining a larger number of viable cuttings for the production of clonal plantlets. Nutrient accumulation by orthotropic stems for cutting production follows the following order: N &gt; K &gt; Ca &gt; Mg &gt; S &gt; P &gt; Mn &gt; Fe &gt; Zn &gt; Cu. Nutrient export by the cuttings follows a descending order: K &gt; N &gt; Ca &gt; Mg &gt; P &gt; S &gt; Mn &gt; Fe &gt; Zn &gt; Cu.
DOI: 10.6084/m9.figshare.11930058.v1
title: Optimization of New Sample Preparation Technique for the Determination of Methadone and Codeine in Plasma Sample by GC-FID

description: A continuous sample drop flow microextraction (CSDF-ME) technique was modified for the pretreatment of plasma samples in the determination of methadone and codeine. The limit of detection and linear range for methadone were 15.0 µg L-1 and 0.1-10.0 mg L-1, respectively. The detection limit and linear range for codeine were 25.0 µg L-1 and 0.2-15.0 mg L-1, respectively. The extraction recoveries were 41.6-52.1%, and the enrichment factors ranged from 65 to 80 for codeine and methadone, respectively. Intra- and interday precisions of the technique were calculated for codeine and methadone concentrations of 0.4 mg L-1 and were 4.2-7.6% and 2.5-5.1%, respectively. Also, the accuracy (error%) of method was in the range -10 to +7.5%. The applicability of the CSDF-ME-gas chromatography-flame ionization detector (GC-FID) technique was illustrated by the determination of the mentioned drugs in human plasma. The attained relative recoveries of methadone and codeine in the 90.0-107.5% range demonstrated the excellent capability of the optimized technique for the microextraction of the mentioned drugs from plasma. The CSDF-ME-GC-FID is a rapid, repeatable and very simple technique that requires a low sample amount.
DOI: 10.6084/m9.figshare.11930052
title: Effects of shading on the growth, development and yield of winged bean (Psophocarpus tetragonolobus)

description: ABSTRACT: An experiment was conducted to investigate the effects of different shading regimes [i.e., 60% (heavy), 30% (moderate), and 0% (control)] on 25 traits associated with the morphological features, photosynthetic gas exchange and agronomic characteristics of winged bean (Psophocarpus tetragonolobus), an underutilized protein-rich legume from the tropics. Collectively, 80% of the studied variables displayed significant differences (P&lt;0.05) between at least two shade treatments. Shading generally showed most pronounced effect on the physiological traits of the legume, whereby the stomatal conductance, photosynthetic and transpiration rate differed significantly among plants for all treatments. The non-shaded plants were observed to have superior growth and physiological responses than the shaded plants. Interestingly, the moderately shaded plants exhibited the highest yield per plant, which significantly differed from the non-shaded and heavily shaded plants. This indicated that winged bean can adapt to partial canopy cover, making it a potential nitrogen-fixing cash crop which can be planted together with fruit or oil trees in commercial plantations.
DOI: 10.6084/m9.figshare.11930052.v1
title: Effects of shading on the growth, development and yield of winged bean (Psophocarpus tetragonolobus)

description: ABSTRACT: An experiment was conducted to investigate the effects of different shading regimes [i.e., 60% (heavy), 30% (moderate), and 0% (control)] on 25 traits associated with the morphological features, photosynthetic gas exchange and agronomic characteristics of winged bean (Psophocarpus tetragonolobus), an underutilized protein-rich legume from the tropics. Collectively, 80% of the studied variables displayed significant differences (P&lt;0.05) between at least two shade treatments. Shading generally showed most pronounced effect on the physiological traits of the legume, whereby the stomatal conductance, photosynthetic and transpiration rate differed significantly among plants for all treatments. The non-shaded plants were observed to have superior growth and physiological responses than the shaded plants. Interestingly, the moderately shaded plants exhibited the highest yield per plant, which significantly differed from the non-shaded and heavily shaded plants. This indicated that winged bean can adapt to partial canopy cover, making it a potential nitrogen-fixing cash crop which can be planted together with fruit or oil trees in commercial plantations.
DOI: 10.6084/m9.figshare.11930049
title: FLI1 gene influences lesion size and skin test may predict therapeutic response in cutaneous leishmaniasis

description: Genes associated with wound healing have been shown to be risk factors for cutaneous leishmaniasis (CL) which is caused by Leishmania braziliensis. In this study, we examined whether the genes previously associated with CL influenced the clinical outcome. Patients were genotyped and retrospectively classified as responders, who were cured with a single course of pentavalent antimony (Sbv), or as refractories, who did not respond to Sbv. Patients characterised as responders showed a stronger response to the leishmanin skin test (LST) when compared to the refractory subjects (p = 0.0003). Furthermore, we observed an association between the FLI1 CC genotype and an increased size of ulcers (p = 0.0170). We suggest that the leishmanin skin test may be a predictive tool for therapeutic outcome and reinforce FLI1 as a potential influencer of susceptibility and lesion size in CL.
DOI: 10.6084/m9.figshare.11929995
title: Neuroblastoma ATAC-Seq IDR peakfiles

description: peaks resulting from IDR analysis of ATAC-Seq biological replicates
DOI: 10.6084/m9.figshare.11930049.v1
title: FLI1 gene influences lesion size and skin test may predict therapeutic response in cutaneous leishmaniasis

description: Genes associated with wound healing have been shown to be risk factors for cutaneous leishmaniasis (CL) which is caused by Leishmania braziliensis. In this study, we examined whether the genes previously associated with CL influenced the clinical outcome. Patients were genotyped and retrospectively classified as responders, who were cured with a single course of pentavalent antimony (Sbv), or as refractories, who did not respond to Sbv. Patients characterised as responders showed a stronger response to the leishmanin skin test (LST) when compared to the refractory subjects (p = 0.0003). Furthermore, we observed an association between the FLI1 CC genotype and an increased size of ulcers (p = 0.0170). We suggest that the leishmanin skin test may be a predictive tool for therapeutic outcome and reinforce FLI1 as a potential influencer of susceptibility and lesion size in CL.
DOI: 10.6084/m9.figshare.11929962
title: Rapid in-field MinION Nanopore glacier melting water metagenomics sequencing at Qilian Mountain

description: Supplementary file 1 has Nanopore read analyses, including LAST, Kaiju and eggNOG mapper V2 results; supplementary file 2 is a .zip file, containing SILVA 16S OTU and related diversity analysis results.
DOI: 10.6084/m9.figshare.11929962.v1
title: Rapid in-field MinION Nanopore glacier melting water metagenomics sequencing at Qilian Mountain

description: Supplementary file 1 has Nanopore read analyses, including LAST, Kaiju and eggNOG mapper V2 results; supplementary file 2 is a .zip file, containing SILVA 16S OTU and related diversity analysis results.
DOI: 10.6084/m9.figshare.11929983
title: Pupillary Light Reflex in Ethambutol-induced Optic Neuropathy

description: Pupillary Light Reflex in Ethambutol-induced Optic Neuropathy
DOI: 10.6084/m9.figshare.11929995.v1
title: Neuroblastoma ATAC-Seq IDR peakfiles

description: peaks resulting from IDR analysis of ATAC-Seq biological replicates
DOI: 10.6084/m9.figshare.11929944
title: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"

description: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"
DOI: 10.6084/m9.figshare.11929944.v1
title: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"

description: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"
DOI: 10.6084/m9.figshare.11929944.v2
title: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"

description: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"
DOI: 10.6084/m9.figshare.11929881
title: MutiQC Report for Neuroblastoma Cell Line ATAC-Seq and ChIP-Seq

description: MutiQC Report for Neuroblastoma Cell Line ATAC-Seq and ChIP-Seq
DOI: 10.6084/m9.figshare.11929944.v3
title: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"

description: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"
DOI: 10.6084/m9.figshare.11929944.v4
title: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"

description: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"
DOI: 10.6084/m9.figshare.11929944.v5
title: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"

description: Raw Data for " Enhanced Cardiac PI3K(p110a) using Gene Therapy Attenuated Cardiac Remodeling in Type-2 Diabetic Mice"
DOI: 10.6084/m9.figshare.11929872
title: Homer Motif Analysis

description: Homer Motif Analysis for MYCN and MYC ChIP-Seq in neuroblastoma cell lines
DOI: 10.6084/m9.figshare.11929872.v1
title: Homer Motif Analysis

description: Homer Motif Analysis for MYCN and MYC ChIP-Seq in neuroblastoma cell lines
DOI: 10.6084/m9.figshare.11929872.v2
title: Homer Motif Analysis

description: Homer Motif Analysis for MYCN and MYC ChIP-Seq in neuroblastoma cell lines
DOI: 10.6084/m9.figshare.11929872.v3
title: Homer Motif Analysis

description: Homer Motif Analysis for MYCN and MYC ChIP-Seq in neuroblastoma cell lines
DOI: 10.6084/m9.figshare.11929872.v4
title: Homer Motif Analysis

description: Homer Motif Analysis for MYCN and MYC ChIP-Seq in neuroblastoma cell lines
DOI: 10.6084/m9.figshare.11929872.v5
title: Homer Motif Analysis

description: Homer Motif Analysis for MYCN and MYC ChIP-Seq in neuroblastoma cell lines
DOI: 10.6084/m9.figshare.11929464
title: “Puffing” in <i>Sarcoscypha austriaca</i>: Back to Ziegenspeck

description: Many discomycetes show the phenomenon of “puffing”: the quasi-simultaneous discharge of large numbers of ascospores, rendering them visible to the unaided eye as a whiff of smoke above the fruitbody. Obviously, some kind of synchronization mechanism must be present to make all asci involved burst at about the same time. This mechanism has generally been understood to be of a mechanical nature. For a (small, dung-inhabiting) <i>Ascobolus</i> species, puffing was shown to involve a discharge wave propagating radially outward from a random origin at a speed of about 1.5 cm/s. Using high-speed imaging, we have found no evidence for such a wave in puffing by the (much larger, wood-inhabiting) apothecia of <i>Sarcoscypha austriaca</i>. Rather, extended (but limited) areas seem to become active essentially simultaneously, and within these areas a few percent of the asci discharge their spores randomly. In these large fruitbodies, puffing is found to be preceded by a small but distinct deformation of the apothecium, the geometry of which is such that it increases the lateral compressive stress in the hymenium. The observations suggest that this increase in stress is instrumental in causing many asci to burst quasi-simultaneously in the affected area, a hypothesis essentially already proposed by H. Ziegenspeck, about a century ago.
DOI: 10.6084/m9.figshare.11929464.v1
title: “Puffing” in <i>Sarcoscypha austriaca</i>: Back to Ziegenspeck

description: Many discomycetes show the phenomenon of “puffing”: the quasi-simultaneous discharge of large numbers of ascospores, rendering them visible to the unaided eye as a whiff of smoke above the fruitbody. Obviously, some kind of synchronization mechanism must be present to make all asci involved burst at about the same time. This mechanism has generally been understood to be of a mechanical nature. For a (small, dung-inhabiting) <i>Ascobolus</i> species, puffing was shown to involve a discharge wave propagating radially outward from a random origin at a speed of about 1.5 cm/s. Using high-speed imaging, we have found no evidence for such a wave in puffing by the (much larger, wood-inhabiting) apothecia of <i>Sarcoscypha austriaca</i>. Rather, extended (but limited) areas seem to become active essentially simultaneously, and within these areas a few percent of the asci discharge their spores randomly. In these large fruitbodies, puffing is found to be preceded by a small but distinct deformation of the apothecium, the geometry of which is such that it increases the lateral compressive stress in the hymenium. The observations suggest that this increase in stress is instrumental in causing many asci to burst quasi-simultaneously in the affected area, a hypothesis essentially already proposed by H. Ziegenspeck, about a century ago.
DOI: 10.6084/m9.figshare.11929326
title: M1 MiRNA-451 Study Blots.pdf

description: full-length blots for MiR-451 Inhibition study
DOI: 10.25392/leicester.data.11929224
title: AGU Supporting Information

description: Supporting datasets for Gill and Walker (in review).<i>The roles of elastic properties, magmatic pressure, and tectonic stress in saucer-shaped sill growth.</i>
DOI: 10.6084/m9.figshare.11929326.v1
title: M1 MiRNA-451 Study Blots.pdf

description: full-length blots for MiR-451 Inhibition study
DOI: 10.25392/leicester.data.11929224.v1
title: AGU Supporting Information

description: Supporting datasets for Gill and Walker (in review).<i>The roles of elastic properties, magmatic pressure, and tectonic stress in saucer-shaped sill growth.</i>
DOI: 10.6084/m9.figshare.11927247
title: Earth Analytics Bootcamp | Teaching Dataset | Monthly Average Temperature Data for Sonoma County Airport and San Diego Area (individual CSV files for 1999 to 2003)

description: This teaching data subset contains data on average monthly maximum temperature (Fahrenheit) at Sonoma County Airport and San Diego Area. <br>There are individual CSV files for each site and year from 1999 to 2003 (e.g. Sonoma-1999-temp.csv is for Sonoma in 1999). Each file has headers and contains one row for the year and 12 columns (one for each month from January to December).<br>Source: National Weather Service
DOI: 10.5522/04/11927208
title: Replication package for "Cost Measures Matter for Mutation Testing Study Validity", accepted at FSE 2020

description: This is a replication package for the experiments reported in 2020 FSE paper "Cost Measures Matter for Mutation Testing Study Validity".<br>For more information, please read "README.md".
DOI: 10.5522/04/11927208.v2
title: Replication package for "Cost Measures Matter for Mutation Testing Study Validity", accepted at FSE 2020

description: This is a replication package for the experiments reported in 2020 FSE paper "Cost Measures Matter for Mutation Testing Study Validity".<br>For more information, please read "README.md".
DOI: 10.5522/04/11927208.v1
title: Replication package for "Cost Measures Matter for Mutation Testing Study Validity", accepted at FSE 2020

description: This is a replication package for the experiments reported in 2020 FSE paper "Cost Measures Matter for Mutation Testing Study Validity".<br>For more information, please read "README.md".
DOI: 10.6084/m9.figshare.11927112.v1
title: Improving effect estimates by limiting the variability in inverse propensity score weights

description: This study describes a novel method to reweight a comparison group used for causal inference, so the group is similar to a treatment group on observable characteristics yet avoids highly variable weights that would limit statistical power. The proposed method generalizes the covariate-balancing propensity score (CBPS) methodology developed by Imai and Ratkovic (2014) to enable researchers to effectively prespecify the variance (or higher-order moments) of the matching weight distribution. This lets researchers choose among alternative sets of matching weights, some of which produce better balance and others of which yield higher statistical power. We demonstrate using simulations that our Penalized CBPS approach can improve effect estimates over those from other established propensity score estimation approaches, producing lower mean squared error. We discuss applications where the method or extensions of it are especially likely to improve effect estimates and we provide an empirical example from the evaluation of Comprehensive Primary Care Plus, a U.S. health care model that aims to strengthen primary care across roughly 3,000 practices. Programming code is available to implement the method in Stata.
DOI: 10.6084/m9.figshare.11927031
title: Model-robust design of mixture experiments

description: Optimal designs are often used for constrained mixture experiments because of the irregular design spaces. For these experiments, the number of blends needed to fit standard linear models may be too large when considering second- or third-order terms. We present a computationally-tractable algorithm for generating model-robust mixture designs that exploits anticipated effect sparsity by using a set of models defined by a user-specified number of higher-order terms. We compared the model-robust designs with Bayesian-optimal designs, and the model-robust designs show an improved ability to either estimate realistic models or make predictions for mixture experiments.
DOI: 10.6084/m9.figshare.11927031.v1
title: Model-robust design of mixture experiments

description: Optimal designs are often used for constrained mixture experiments because of the irregular design spaces. For these experiments, the number of blends needed to fit standard linear models may be too large when considering second- or third-order terms. We present a computationally-tractable algorithm for generating model-robust mixture designs that exploits anticipated effect sparsity by using a set of models defined by a user-specified number of higher-order terms. We compared the model-robust designs with Bayesian-optimal designs, and the model-robust designs show an improved ability to either estimate realistic models or make predictions for mixture experiments.
DOI: 10.6084/m9.figshare.11926935
title: Raw data of alpine wetland.xlsx

description: Methane flux in an alpine wetland of Qinghai Lake and its relationship with biotic and abiotic factors.
DOI: 10.6084/m9.figshare.11926935.v1
title: Raw data of alpine wetland.xlsx

description: Methane flux in an alpine wetland of Qinghai Lake and its relationship with biotic and abiotic factors.
DOI: 10.6084/m9.figshare.11926929.v1
title: Metadata record for: Electron microscopy dataset for the recognition of nanoscale ordering effects and location of nanoparticles

description: This dataset contains key characteristics about the data described in the Data Descriptor Electron microscopy dataset for the recognition of nanoscale ordering effects and location of nanoparticles. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.11926863
title: Virtuall Bank Branches

description: Data set from research about virtual bank branches. Consumers adopt and use.
DOI: 10.6084/m9.figshare.11926863.v1
title: Virtuall Bank Branches

description: Data set from research about virtual bank branches. Consumers adopt and use.
DOI: 10.6084/m9.figshare.11926833
title: PF RTD data_figshare.xlsx

description: Neuromuscular parameters of the plantar flexors in middle-aged and older human males<br>
DOI: 10.6084/m9.figshare.11926812
title: SaccadesDataset.csv

description: Saccadic records from ataxia patients and control individuals
DOI: 10.6084/m9.figshare.11926809
title: Training and Verification datasets.zip

description: This file includes the inputs of CNN1 (the fringe images of 1000 scenes), the output of CNN1 (the numerator and denominator terms used to calculate the wrapped phases), the inputs of CNN2 (the fringe patterns of 1000 scenes captured by two cameras, and the reference plane information) and the outputs of CNN2 (the fringe orders corresponding to 1000 scenes).
DOI: 10.6084/m9.figshare.11926818.v1
title: R data

description: Quantified annotations of transcriptomes. R environment.
DOI: 10.6084/m9.figshare.11926770
title: Annotation

description: Annotations of transcript isoforms. Pfam protein domains along with E-values and GO terms via InterProScan.