cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2ckwtn
title: CCDC 2191942: Experimental Crystal Structure Determination

description: Related Article: Shuang Zhao, Yi He, Feiyu Gao, Yue Wei, Jiawei Zhang, Mengxiao Chen, Yunyun Gao, Yuan Zhang, Jun-Yan Liu, Zufeng Guo, Zhenghua Li, Shenyou Nie|2023|Chem.Commun.|59|3099|doi:10.1039/D2CC06281J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7734186
title: Supporting data for the manuscript "Protein quality assessment with graph convolution guided by a loss function designed for high quality decoys"

description: This dataset provides the predictions of the protein quality<br> assessment method Q_epsilon with respect to CASP13 and CASP14, as well<br> as a snapshot of the github repository providing the code for the<br> method.<br> The format of the file is as follows: The first column represents the<br> target and decoy names in the format &lt;target name&gt;_&lt;decoy name&gt;. The<br> second column is the true GDTTS, and the third column represents the<br> predicted GDTTS by Q_epsilon.
DOI: 10.5281/zenodo.7734187
title: Data for the manuscript "Protein quality assessment with graph convolution guided by a loss function designed for high quality decoys"

description: Supporting material
DOI: 10.5281/zenodo.7735108
title: Supporting data for the manuscript "Protein quality assessment with graph convolution guided by a loss function designed for high quality decoys"

description: This dataset provides the predictions of the protein quality<br> assessment method Q_epsilon with respect to CASP13 and CASP14, as well<br> as a snapshot of the github repository providing the code for the<br> method.<br> The format of the file is as follows: The first column represents the<br> target and decoy names in the format &lt;target name&gt;_&lt;decoy name&gt;. The<br> second column is the true GDTTS, and the third column represents the<br> predicted GDTTS by Q_epsilon.
DOI: 10.6084/m9.figshare.22272790
title: Fastq_Files

description: H1-H4 indicate samples from healthy mice. D1-D4 indicate samples from DSS-only mice. C1-C4 indicate samples from mice that recieved DSS and <em>S.b.CIV</em> treatment.
DOI: 10.6084/m9.figshare.22272790.v1
title: Fastq_Files

description: H1-H4 indicate samples from healthy mice. D1-D4 indicate samples from DSS-only mice. C1-C4 indicate samples from mice that recieved DSS and <em>S.b.CIV</em> treatment.
DOI: 10.5517/ccdc.csd.cc2f0bvn
title: CCDC 2234661: Experimental Crystal Structure Determination

description: Related Article: Sen Yin, Xiaomeng Li, Hongjing Wang, Jingya Li, Wenru Huang, Ting Gao, Pengfei Yan, Yanyan Zhou, Hongfeng Li|2023|CrystEngComm|25|1541|doi:10.1039/D3CE00030C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25345/c5d795m5m
title: MassIVE MSV000091487 - Reutilizing MetaMorpheus as an open tool for monoclonal antibody characterization
title: NIST mAB standard in intact, top down and multi-protease digested form for the testing of new tools for mAB characterization.
DOI: 10.6084/m9.figshare.22273024
title: Home-based sampling - preliminary data

description: The file contains the data from the preliminary study described in the manuscript.
DOI: 10.6084/m9.figshare.22273024.v2
title: Home-based sampling - preliminary data

description: The file contains the data from the preliminary study described in the manuscript.
DOI: 10.6084/m9.figshare.22273024.v1
title: Home-based sampling - preliminary data

description: The file contains the data from the preliminary study described in the manuscript.
DOI: 10.25345/c58g8ft1g
title: MassIVE MSV000091488 - The Role of TGFbeta-regulated osteocytic perilacunar/canalicular remodeling in age-related bone fragility
title: Poor bone quality (BQ) is a major factor in skeletal fragility in the elderly. Molecular mechanisms establishing and maintaining BQ, independent of bone mass, are unknown but are thought to be primarily determined by osteocytes. We hypothesize that the age-related decline in BQ results from suppression of osteocyte perilacunar/canalicular remodeling (PLR), which maintains bone material properties. We examined bones from young and aged mice with an osteocyte-intrinsic repression of TGFbeta signaling (TbetaRIIocy-/-) that suppresses PLR. Control-aged bone displayed decreased TGFbeta signaling and PLR, but aging male TbetaRIIocy-/- bone did not worsen existing PLR suppression. This epistatic relationship impacted collagen material behavior at the nano and tissue scale in macromechanical tests. The effects of age on bone mass, density, and mineral material behavior were independent of osteocytic TGFbeta. We determine that the decline of BQ with age arises from lost osteocyte function and maintenance of collagen integrity in a TGFbeta-dependent fashion.
DOI: 10.6084/m9.figshare.22273006.v1
title: Shein Tweets (Original Tweets and English Only)

description: Our cleaned dataset with id strings of tweets containing "shein" with only original, English tweets for our Winter 2023 Digital Humanities 120: Social Media Data Analytics project at UCLA.
DOI: 10.6084/m9.figshare.22273006
title: Shein Tweets (Original Tweets and English Only)

description: Our cleaned dataset with id strings of tweets containing "shein" with only original, English tweets for our Winter 2023 Digital Humanities 120: Social Media Data Analytics project at UCLA.
DOI: 10.6084/m9.figshare.22272994
title: Shein Tweets (Raw)

description: Our raw dataset with id strings of tweets containing "shein" with only original, English tweets for our Winter 2023 Digital Humanities 120: Social Media Data Analytics project at UCLA.
DOI: 10.6084/m9.figshare.22272994.v1
title: shein_raw_id_str.csv

description: ID strings for tweets from our raw Shein dataset used for Winter 2023 Digital Humanities 120: Social Media Data Analytics at UCLA.
DOI: 10.6084/m9.figshare.22273042
title: Fast Fashion Tweets (Raw)

description: Our raw dataset with id strings of tweets containing "fast fashion" for our Winter 2023 Digital Humanities 120: Social Media Data Analytics project at UCLA.
DOI: 10.6084/m9.figshare.22273048
title: Fast Fashion Tweets (Original Tweets and English Only)

description: Our cleaned dataset with id strings of tweets containing "fast fashion" with only original, English tweets for our Winter 2023 Digital Humanities 120: Social Media Data Analytics project at UCLA.
DOI: 10.26186/147763
title: Historical Bushfire Boundaries

description: This dataset was produced under Stream 1 - Work Package 4 of the 2021-23 Australian Research Data Commons (ARDC) Bushfire Data Challenge Project; a collaborative partnership between the ARDC, Geoscience Australia, and the Emergency Management Spatial Information Network. The Project’s aim was to bring together a single nationally consistent and harmonised historical bushfire boundary data derived from the authoritative state and territory agencies. Geoscience Australia's role within this project was to; negotiate access to the data, collate and transform the data into the National Standard and then deliver the 'Historical Bushfire Boundaries' data through a static file and a webservice.<br>More information about the ARDC Project and Work Package 4: <br>https://ardc.edu.au/program/bushfire-data-challenges/ More information about the Fire History Data Dictionary: <br>https://www.afac.com.au/insight/doctrine/article/current/fire-history-data-dictionary<br>The Historical Bushfire Boundaries dataset represents the aggregation of jurisdictional supplied burnt areas polygons stemming from the early 1900's through to 2022 (excluding the Northern Territory). The burnt area data represents curated jurisdictional owned polygons of both bushfires and prescribed (planned) burns. To ensure the dataset adhered to the nationally approved and agreed data dictionary for fire history Geoscience Australia had to modify some of the attributes presented.<br>The information provided within this dataset is reflective only of data supplied by participating authoritative agencies and may or may not represent all fire history within a state.<br><b>Important:</b> The Northern Australia Fire Information (NAFI) data has been intentionally omitted from this dataset (refer to Lineage).
DOI: 10.6084/m9.figshare.22273066
title: Figure 1: Fasta file

description: FASTA file containing CD4 CDS protein coding sequences from primates closely related to Homo Sapiens who are affected by HIV-1/SIV. This file contains 11 aligned cds protein coding sequences, found through NCBI and Ensembl BLAST. This file was then used for many other bioinformatic analysis applications further in our project.
DOI: 10.6084/m9.figshare.22273081
title: Fast Fashion Tweets (Original and English Only + Sentiment Scores)

description: Our cleaned dataset with id strings of tweets containing "fast fashion" with only original, English tweets with sentiment scores for our Winter 2023 Digital Humanities 120: Social Media Data Analytics project at UCLA.
DOI: 10.6084/m9.figshare.22273084
title: Shein Tweets (Original and English Only + Sentiment Scores)

description: Our cleaned dataset with id strings of tweets containing "shein" with only original, English tweets plus sentiment scores for our Winter 2023 Digital Humanities 120: Social Media Data Analytics project at UCLA.
DOI: 10.5281/zenodo.7727228
title: Data files for an RNA-Seq Tutorial

description: These files go with a short transcriptomics (RNA-Seq) tutorial that I am preparing for an undergraduate level tutorial. The data analysis will be on a Galaxy server. I'll update the description with a link to the tutorial text when its ready. These data are a subset of those published by O’Connell R, Thon M et al. 2012. Lifestyle transitions in plant pathogenic <em>Colletotrichum</em> fungi defined by genome and transcriptome analyses. Nature Genetics. 44:1060–1065.
DOI: 10.5281/zenodo.7727229
title: Data files for an RNA-Seq Tutorial

description: These files go with a short transcriptomics (RNA-Seq) tutorial that I am preparing for an undergraduate level tutorial. The data analysis will be on a Galaxy server. I'll update the description with a link to the tutorial text when its ready. These data are a subset of those published by O’Connell R, Thon M et al. 2012. Lifestyle transitions in plant pathogenic <em>Colletotrichum</em> fungi defined by genome and transcriptome analyses. Nature Genetics. 44:1060–1065.
DOI: 10.5281/zenodo.7735223
title: Data files for an RNA-Seq Tutorial

description: These files go with a short transcriptomics (RNA-Seq) tutorial that I am preparing for an undergraduate level tutorial. The data analysis will be on a Galaxy server. I'll update the description with a link to the tutorial text when its ready. These data are a subset of those published by O’Connell R, Thon M et al. 2012. Lifestyle transitions in plant pathogenic <em>Colletotrichum</em> fungi defined by genome and transcriptome analyses. Nature Genetics. 44:1060–1065.
DOI: 10.6073/pasta/753b1ca1837049bc7c3e77e784408a1e
title: Aquatic Vertebrate Population Study in Mack Creek, Andrews Experimental Forest, 1987 to present

description: Populations of Coastal Cutthroat trout (Oncorhynchus clarkii clarkii) in two standard reaches of Mack Creek in the H.J. Andrews Experimental Forest have been monitored since 1987. Monitoring of Coastal Giant Salamanders, Dicamptodon tenebrosus began in 1993. The two standard reaches are in a section of clearcut forest (ca. 1963) and an upstream 500 year old coniferous forest. Sub-reaches are sampled with 2-pass electrofishing, and all captured vertebrates are measured and weighed. Additionally, a set of channel measurements are taken with each sampling. This study constitutes one of the longest continuous records of salmonid populations on record.
DOI: 10.6084/m9.figshare.21707015.v1
title: Rawdata

description: fasta file of the assembled genomes and their relative abundnace.
DOI: 10.21985/n2-5bf9-5e21
title: Energy metabolism modulates the regulatory impact of gene activators on protein expression
DOI: 10.5517/ccdc.csd.cc2bf4mk
title: CCDC 2157588: Experimental Crystal Structure Determination

description: Related Article: Rui Feng, Juan Liu, Li Guo, Hong-Zhen Shu, Qin-Mei Zhou, Li Liu, Cheng Peng, Liang Xiong|2023|Arab.J.Chem.|16|104696|doi:10.1016/j.arabjc.2023.104696
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.26186/147583
title: Oil and Gas Pipelines Database

description: The Oil and Gas Pipelines Database contains known spatial locations of onshore and offshore pipelines or pipeline corridors used to transport natural gas, oil and other liquids within Australia’s mainland and territorial waters. This database contains data, as received, from GP INFO, Petrosys. Minimal effort was made to revise, value add and/or spatially improve the datasets.
DOI: 10.5517/ccdc.csd.cc2blb8k
title: CCDC 2162568: Experimental Crystal Structure Determination

description: Related Article: Dongxu YI, Yuhang Dong, Qinglin Wang, Juan Wu, Minghui Qi, Guobin Ren|2023|J.Mol.Liq.|377|121532|doi:10.1016/j.molliq.2023.121532
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bxsnq
title: CCDC 2172624: Experimental Crystal Structure Determination

description: Related Article: Yan-Ling Li, Peng-Tao Sheng, Fu-An Li, Rui-Bing Bai, Xian-Ming Gao, Yong-Jun Han|2023|Inorg.Chem.|62|4043|doi:10.1021/acs.inorgchem.2c03927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22248118.v5
title: Creeping to failure transition of landslides

description: supporting information file
DOI: 10.57760/sciencedb.j00196.00007
title: Characterization and genetic analysis of a new allelic mutant of Miniature1 gene in maize
title: 一个新的玉米Miniature1基因等位突变体的鉴定与遗传分析

description: Grain development is a key determinant for maize grain yield and quality, but the regulatory mechanisms have not been fully revealed. A maize mutant deficient in kernel development was found and selected in our field. The mutant exhibited an incomplete grain filling, reduced embryo and endosperm size, and shriveled mature grains and empty pericarp. Genetic analysis suggested that the mutant phenotype was controlled by a single recessive nuclear gene. The candidate gene was preliminarily mapped to a 1.1 Mb interval on chromosome 2, and further a hAT transposon was inserted into the first exon of Miniature1 (Mn1) gene, which resulting in a frame-shift mutation and down-regulated expression of Mn1. The transposon insertion was fully linked to the defective kernel phenotype of the mutant, which was nominated as mn1-m2. Allelism test of mn1-m2 and mn1-89 suggested that mn1-m2 was a noval allelic mutant of Mn1 gene. In conclusion, we identified a new allelic mutant of Mn1 gene with different mutation site and type, which improved maize germplasm resources and provided new genetic materials for the analysis of the mechanism of Mn1 regulation on kernel development.
description: Grain development is a key determinant for maize grain yield and quality, but the regulatory mechanisms have not been fully revealed. A maize mutant deficient in kernel development was found and selected in our field. The mutant exhibited an incomplete grain filling, reduced embryo and endosperm size, and shriveled mature grains and empty pericarp. Genetic analysis suggested that the mutant phenotype was controlled by a single recessive nuclear gene. The candidate gene was preliminarily mapped to a 1.1 Mb interval on chromosome 2, and further a hAT transposon was inserted into the first exon of Miniature1 (Mn1) gene, which resulting in a frame-shift mutation and down-regulated expression of Mn1. The transposon insertion was fully linked to the defective kernel phenotype of the mutant, which was nominated as mn1-m2. Allelism test of mn1-m2 and mn1-89 suggested that mn1-m2 was a noval allelic mutant of Mn1 gene. In conclusion, we identified a new allelic mutant of Mn1 gene with different mutation site and type, which improved maize germplasm resources and provided new genetic materials for the analysis of the mechanism of Mn1 regulation on kernel development.
DOI: 10.6084/m9.figshare.22248118
title: Creeping to failure transition of landslides

description: supporting information file
DOI: 10.6084/m9.figshare.22248118.v6
title: Creeping to failure transition of landslides

description: supporting information file
DOI: 10.26183/kkrg-ta25
title: Interview data with key informants for the project titled Reconceptualising Services from the Perspectives of Experienced Children and Teens (ReSPECT) 

description: Interview transcripts from qualitative semi-structured interviews with senior policymakers and practitioners in the child protection field. This data was used to explore understanding and experiences of children and young people's participation in child protection services.
DOI: 10.57931/1887521
title: IM3 SELECT Urbanization Data

description: IM3 SELECT Urbanization Data Urban fraction is provided in TIF files projected on the WGS84 datum at coarse (1/8 degree) and downscaled (1km) resolutions across the globe for each of three Shared Socioeconomic Pathway (SSP) scenarios corresponding to SSP2, SSP3, and SSP5; and each of two population scenarios corresponding to the default population scenario and an updated population scenario with more detailed projections for the United States. The population projections are provided as CSV files. Folder structure: default_population population urban_fraction coarse SSP2 SSP3 SSP5 downscaled SSP2 SSP3 SSP5united_states_updated_population population urban_fraction coarse SSP2 SSP3 SSP5 downscaled SSP2 SSP3 SSP5 Urban fraction data was produced using the SELECT model v1.0.0 (Gao, J. & O'Neill, B.C. 2019). Default population data derived from Gao, J. & O'Neill, B.C. 2020. Original model outputs produced using the default population data are available from Gao, J. 2020. Updated United States population data derived from Zoraghein, H. & O'Neill, B.C. 2020. Other SELECT input files available at Gao, J. & O'Neill, B.C. 2022.
DOI: 10.57931/1890465
title: CLMU Anthropogenic Heat Sensitivity Experiments

description: User namelist settings, code changes, and driving scripts to set to CLM5 on NERSC for deciphering the sensitivity of urban canopy air temperature to anthropogenic heat flux experiments. More details are available in README.md.
DOI: 10.57931/1892041
title: A multi-scale time-series dataset of anthropogenic heat from buildings in Los Angeles County

description: The dataset contains hourly Anthropogenic heat (AH) from buildings in Los Angeles County, based on weather data from 2018. The hourly AH is aggregated at three spatial resolutions: 450m x 450m grid, 12km x 12km grid, and census tract. The AH is broken down into three components: building envelope surface convection, heating, ventilation, and air conditioning (HVAC) system heat release, and zone exfiltration and exhaust air heat loss. The dataset is created with the physics-based EnergyPlus building energy models to calculate individual buildings' AH considering WRF-UCM simulated microclimate conditions. Please refer to the paper "A multi-scale time-series dataset of anthropogenic heat from buildings in Los Angeles County" for more information about the data generation workflow and the data validation procedure. The data set contains two folders: the "output_data" folder holds the simulation results (EP_output and EP_output_csv), building metadata (building_metadata.geojson and building_metadata.csv), aggregated heat emission and energy consumption time-series data (hourly_heat_energy), and geographical data (geo_data) associated with the GEOID referenced in heat and energy consumption data. The "input_data" folder contains the raw data used to generate files in the "output_data" folder as well as data sets used in the validation. The code repository (https://github.com/IMMM-SFA/xu_etal_2022_sdata) holds the processing scripts for data curation, validation, and visualization.
DOI: 10.57931/1901788
title: When Do Different Scenarios of Future Electricity Demand Start to Meaningfully Diverge?

description: Climate and population change are known to influence electricity demand, but what is the impact of uncertainty in climate and population projections on electricity demand in the United States (U.S.) over the next 30 years? This question has important implications for investment decisions in the energy sector, which are typically made using a 15- to 30-year time horizon. Simply put, if future climate and population scenarios do not lead to meteorological conditions and subsequent energy demands that are distinctly different within the first 30 years then, for the purposes of investment decisions, it may not matter which potential pathway we are most likely on. The Integrated, Multisector, Multiscale Modeling (IM3) project has generated a wide, yet plausible range of 21st century high-resolution climate and population scenarios for the U.S. The IM3 projections span two climate scenarios (Representative Concentration Pathways 4.5 and 8.5) and two population scenarios (Shared Socioeconomic Pathways 3 and 5). For each of the climate scenarios, we reflect a range of climate model uncertainty by using boundary conditions from a set of climate models that are hotter and colder than the multi-model mean. In total there are eight (2 x 2 x 2) IM3 scenarios. This work explores a basic question: When do future climate and energy outcomes start to meaningfully diverge across the eight scenarios? The analysis is done on both the raw meteorology time-series from each scenario as well as a time-series of projected total electricity demand generated using IM3's Total ELectricity Loads (TELL) model. We also explore the spatial heterogeneity of the divergence signal to identify regions of the country that may be more or less path dependent.