cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.92be78
title: Occurrence Download

description: A dataset listing the 199 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Checklist of the Vascular Plants of the Republic of Guinea"
 ]
}

 The dataset's 199 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010436-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.98549j
title: Occurrence Download

description: A dataset containing 44180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-26.0",
 "Geometry POLYGON((8.04100 42.02668,9.87206 42.02668,9.87206 42.75945,8.04100 42.75945,8.04100 42.02668))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (August, July, September)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2004-2023"
 ]
}

 The dataset includes 44180 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022246-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g54mqw
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cicerbita petiolata (K.Koch) Gagnidze"
 ]
}

 The dataset includes 115 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0094471-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmxfr9
title: Occurrence Download

description: A dataset containing 311 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Handleyomys chapmani (Thomas, 1898)"
 ]
}

 The dataset includes 311 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009972-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5qzuxd
title: Occurrence Download

description: A dataset containing 326 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Linum compactum A.Nelson"
 ]
}

 The dataset includes 326 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010449-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ahgbmr
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Exacum anisopterum Klack."
 ]
}

 The dataset includes 15 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208373-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kukd89
title: Occurrence Download

description: A dataset containing 30610 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Linaria alpina (L.) Mill."
 ]
}

 The dataset includes 30610 records from 300 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009978-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqpzq4
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prescottia cordifolia Rchb.f."
 ]
}

 The dataset includes 36 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0094495-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xcuzpx
title: Occurrence Download

description: A dataset containing 5637 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "GadmGid is TWN.7_1",
 "TaxonKey is Chroicocephalus ridibundus (Linnaeus, 1766)",
 "Year 2015-2023"
 ]
}

 The dataset includes 5637 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031559-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fbw86d
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Saudi Arabia",
 "OccurrenceStatus is Present",
 "TaxonKey is Aizoon canariense L."
 ]
}

 The dataset includes 25 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010001-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7hgmh
title: Occurrence Download

description: A dataset containing 187 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ewartia planchonii (Hook.fil.) Beauverd"
 ]
}

 The dataset includes 187 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208363-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nyjtcj
title: Occurrence Download

description: A dataset containing 93 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prepusa connata Gardner"
 ]
}

 The dataset includes 93 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0094489-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mbdh7e
title: Occurrence Download

description: A dataset containing 5637 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "GadmGid is TWN.7_1",
 "TaxonKey is Chroicocephalus ridibundus (Linnaeus, 1766)",
 "Year 2015-2023"
 ]
}

 The dataset includes 5637 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031562-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r2qyck
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ewartiothamnus sinclairii (Hook.fil.) Anderb."
 ]
}

 The dataset includes 80 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208365-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2xwu25
title: Occurrence Download

description: A dataset containing 11641 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nuttallanthus canadensis (L.) D.A.Sutton"
 ]
}

 The dataset includes 11641 records from 282 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010007-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26008/1912/bco-dmo.774459.1
title: CTD sensor data from two cruises from R/V Robert Gordon Sproul SP1714 in the California Current waters off the coast of Southern California and Baja California from 2017-2018

description: CTD sensor data from two cruises from R/V Robert Gordon Sproul SP1714 in the California Current waters off the coast of Southern California and Baja California from 2017-2018
DOI: 10.26008/1912/bco-dmo.915302.1
title: Sediment Nitrification Incubation data of a subterrarnian estuary core take in July 2020 in Gloucester Point, Virginia

description: These data are the result of a sediment slurry incubation experiment conducted with 15N-labeled ammonium to quantify nitrification rates in the sediments of a shallow, sandy subterranean estuary in Gloucester Point, VA, USA. Triplicate sediment cores that were 50cm in length were collected and sectioned into 10cm intervals. Homogenized sediment was incubated with porewater from the same depth interval that had been amended with 15N-labeled ammonium. Sediments were incubated in the dark for zero, six and twelve hours. At each time point, samples were collected to analyze dissolved inorganic nitrogen (nitrate, nitrite, and ammonium) concentrations. Samples were analyzed with an isotope ratio mass spectrometer in order to assess the 15N enrichment of the nitrate in each sample resulting in a delta value (d15N) that allows for the calculation of the mole fraction of 15N-labeled nitrate produced by each slurry. This production over time constitutes the sediment nitrification rate for each depth interval.
DOI: 10.26008/1912/bco-dmo.774585.1
title: Experimental data testing the N2 and CO2 fixing activity of the UCYN-A/haptophyte symbiosis in nitrate and ammonium rich waters in the California Current from May to October 2017

description: Experimental data testing the N2 and CO2 fixing activity of the UCYN-A/haptophyte symbiosis in nitrate and ammonium rich waters in the California Current from May to October 2017.
DOI: 10.26008/1912/bco-dmo.914715.1
title: Temperature data from a standardized short-term (18 hour) heat stress assay of Montipora capitata and Porites compressa collected at a patch reef in Kane'ohe Bay, O'ahu, Hawai'i in September of 2022

description: Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves. This dataset includes the temperature data from the standardized short-term (18 hour) heat stress assay.
DOI: 10.26008/1912/bco-dmo.914723.1
title: Photochemical yield and bleaching severity data from a standardized short-term (18 hour) heat stress assay of Montipora capitata and Porites compressa collected at a patch reef in Kane'ohe Bay, O'ahu, Hawai'i in September of 2022

description: Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves.  This dataset includes the photochemical yield from the standardized short-term (18 hour) heat stress assay.
DOI: 10.26008/1912/bco-dmo.897403.1
title: Benthic cover data photoquadrat images from patch reef 13 in Kāne'ohe Bay, O'ahu, Hawai'i from 2015 to 2022

description: Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves.

This dataset contains benthic cover data and photoquadrat images including point counts and organism identifications from patch reef 13 in Kāne'ohe Bay, O'ahu, Hawai'i from 2015 to 2022.
DOI: 10.26008/1912/bco-dmo.904962.1
title: Physiology of Montipora capitata and Porites compressa from October 2019 to September 2022 in response to marine heatwaves (2015 and 2019) in Hawaiʻi

description: Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves. This dataset includes all of the physiological data for both species from October 2019 to September 2022.
DOI: 10.26008/1912/bco-dmo.897415.1
title: Coral bleaching severity and mortality data from patch reef 13 in Kāne'ohe Bay, O'ahu, Hawai'i from 2015 to 2022

description: This dataset contains coral colony-level bleaching severity and mortality (coral genotype, bleaching phenotype, bleaching score, mortality percent) from patch reef 13 in Kāne'ohe Bay, O'ahu, Hawai'i from 2015 to 2022.

This data set was collected as part of a study of benthic community composition data from patch reef 13 and colony-level bleaching severity data. See Related Dataset &quot;Benthic cover&quot; for more data from this study.

Study abstract:

Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves.
DOI: 10.26008/1912/bco-dmo.905047.1
title: In-field temperature data Kane'ohe Bay, O'ahu, Hawai'i from 2013 to 2023

description: Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves. This dataset includes the in situ temperature data from Kāne'ohe Bay, O'ahu, Hawai'i from 2013-2023.
DOI: 10.26008/1912/bco-dmo.911212.1
title: MPn-derived methane production by epiphytic bacteria on pelagic Sargassum seaweed from 2017-2019 (Cyanobacteria Hydrocarbons project)

description: The essential nutrient phosphorus is biologically scarce in the Sargasso Sea, yet the pelagic macroalgae Sargassum, for which this area of the North Atlantic Ocean is named, thrives. We tested the hypothesis that Sargassum holobionts utilize methylphosphonate (MPn) as an alternative source of phosphorus via bottle incubations, finding lysis liberated phosphonate-derived methane. The resulting data of methane production relative to various control conditions in the bottle system over time was used as an analog for MPn utilization, in line with previous studies. We noticed the methane production rates were ~linear for the first 2-3 days in each trial, after which production rates began to decrease, likely due to bottle effects. As such, the linear portion of methane production over time was used to calculate the anticipated MPn utilization rate in situ, where confounding variables induced by the experimental design would not impact the microbial activity. These MPn utilization rates are also reported, allowing for more appropriate comparison across trials and use in environmental impact estimates. 

The observed activity occurred at concentrations as low as 35 nM MPn and was inhibited by antibiotics, implicating microbial members of the holobiont capable of MPn lysis at realistic environmental concentrations. A survey of macroalgal species inhabiting the Sargasso Sea found a ubiquitous capacity for MPn lysis; such capacity was absent in species inhabiting phosphorus-replete waters of the California Current, pointing to phosphorus limitation as a selective pressure. These results suggest algal holobionts may conditionally acquire phosphorus from phosphonates while simultaneously serving as a source of atmospheric methane. Incubations of macroalgal holobionts were collected from surface waters (Sargassum spp) and shallow reefs (all other 2019) offshore 4km NE of Bermuda, while all 2017 macroalgal species were collected by scientific divers in shallow reefs offshore Santa Barbara, CA.
DOI: 10.26008/1912/bco-dmo.914655.1
title: Pigment concentrations determined by HPLC from samples collected on Leg 1 (Seattle, WA to Hilo, HI) of the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15, RR1814) on R/V Roger Revelle from September to October 2018

description: This dataset contains high-performance liquid chromatography (HPLC) pigment data (19But, 19Hex, Allo, β Car, α Car, Chl a, Chl b, Chlc 1,2, Chl c 3, Cphlid, Diadino, Diato, Fuco, Lut, Neo, Peri, Prasino, Viola, Zea) from the U.S. GEOTRACES GP15 Pacific Meridional Transect from Alaska (56°M) to Tahiti (20°S) along 152°W between September 24, 2018 and November 24, 2018. Samples for pigment analysis were collected at 6 depths at every major station (N=23 stations) and filtered onto GF/F filters, which were frozen at -80°C until analysis at the HPLC Facility at Oregon State University managed by Ricardo Letelier (https://ceoas.oregonstate.edu/ocean-ecology-and-biogeochemistry-facilities). Samples were extracted and analyzed on a Waters 996 absorbance photodiode array detector in combination with a Waters 2475 fluorescence detector in September 2019.

These data were collected by the GP15 management team to provide biological context for the geochemical measurements made by GEOTRACES PIs. This dataset contains the data from Leg 1 of the cruise (RR1814), from Seattle, Washington, USA to Hilo, Hawaii, USA. Leg 2 data are provided in a separate dataset (see 'Related Datasets' section of metadata).
DOI: 10.26008/1912/bco-dmo.914845.1
title: Pigment concentrations determined by HPLC from samples collected on Leg 2 (Hilo, HI to Papeete, French Polynesia) of the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15, RR1815) on R/V Roger Revelle from Oct-Nov 2018

description: This dataset contains high-performance liquid chromatography (HPLC) pigment data (19But, 19Hex, Allo, β Car, α Car, Chl a, Chl b, Chlc 1,2, Chl c 3, Cphlid, Diadino, Diato, Fuco, Lut, Neo, Peri, Prasino, Viola, Zea) from the U.S. GEOTRACES GP15 Pacific Meridional Transect from Alaska (56°M) to Tahiti (20°S) along 152°W between September 24, 2018 and November 24, 2018. Samples for pigment analysis were collected at 6 depths at every major station (N=23 stations) and filtered onto GF/F filters, which were frozen at -80°C until analysis at the HPLC Facility at Oregon State University managed by Ricardo Letelier (https://ceoas.oregonstate.edu/ocean-ecology-and-biogeochemistry-facilities). Samples were extracted and analyzed on a Waters 996 absorbance photodiode array detector in combination with a Waters 2475 fluorescence detector in September 2019.

These data were collected by the GP15 management team to provide biological context for the geochemical measurements made by GEOTRACES PIs. This dataset contains the data from Leg 1 of the cruise (RR1815), from Hilo, Hawaii, USA to Papeete, French Polynesia. Leg 1 data are provided in a separate dataset (see 'Related Datasets' section of metadata).
DOI: 10.26008/1912/bco-dmo.907353.1
title: Ecological monitoring of marine invertebrates on Isla Natividad from 2006 to 2021

description: This dataset encompasses information about marine invertebrates transects between 2006 to 2021 in Isla Natividad. Abundances of invertebrates can be found in the data set. Also, the dates when the transects were done, the site, the name of the diver, the depth the transect was laid, if the site was a marine reserve or not, if the site is inside a marine protected area or not, the latitude and longitude of the sites, the temperature of the water, the number of transect from where the information was counted, and the species name of each invertebrate counted.

Ecological monitoring is important to collect data of species that inhabit an specific ecosystem. For this data set, we present all the data form 2006 to 2021 on algae, marine invertebrates, fish and uniform point contact at six different sites in Isla Natividad off the coast of Baja California Sur, Mexico. Data was collected once a year by trained divers as a collaborative effort from Stanford University, non-governmental organizations, and fishing cooperative federations. These data provides the abundaces of algae, invertebrates, fish and substrate  of Isla Natividad over the spam of 15 years and may be use to assess changes in the ecosystems after shocks such as hypoxic events or marine heatwaves.
DOI: 10.26008/1912/bco-dmo.907363.1
title: Ecological monitoring of fish on Isla Natividad from 2006 to 2021

description: This dataset encompasses information about fish transects between 2006 to 2021 in Isla Natividad. Abundances, sex and size of fish can be found in the data set. Also, the dates when the transects were done, the site, the name of the diver, the depth the transect was laid, if the site was a marine reserve or not, if the site is inside a marine protected area or not, the latitude and longitude of the sites, the temperature of the water, the number of transect from where the information was counted, and the species name of the fish counted.

Ecological monitoring is important to collect data of species that inhabit an specific ecosystem. For this data set, we present all the data form 2006 to 2021 on algae, marine invertebrates, fish and uniform point contact at six different sites in Isla Natividad off the coast of Baja California Sur, Mexico. Data was collected once a year by trained divers as a collaborative effort from Stanford University, non-governmental organizations, and fishing cooperative federations. These data provides the abundaces of algae, invertebrates, fish and substrate  of Isla Natividad over the spam of 15 years and may be use to assess changes in the ecosystems after shocks such as hypoxic events or marine heatwaves.