DOI: 10.6084/m9.figshare.19764199
title: Datasets for Geissmann et al., 2022

description: # Datasets for Geissmann et al., 2022.<br> <br> This entry provides the datasets for the relevant manuscript figures (Figure 4, 5, 6, S2 and S4).<br> Data is provided as individual CSVs. Data is often shared between different sub-figures and, sometimes, figures. <br> Fields are described below.<br> <br> <br> * `fig_4ACE_meta.csv` -- describes the metadata for figure 4 A,C,E<br> * id -- the unique identifier of an experimental replicate <br> * device -- a unique identifier of a device (one sticky pi)<br> * start -- start time of the experiment<br> * end -- end time of the experiment<br> * condition -- experimental treatment DD or LD, see manuscript<br> * ref_datetime -- The origin time of the experiment. Time is to be expressed relative to this reference. This is the start of the first experimental (subjective) day<br> <br> * `fig_4AC_data.csv` -- the data for figure 4 A,C. <br> * id -- matches the metadata id (see above)<br> * t -- the time, in second, using the experimental reference time as an origin (see above) <br> * N -- the number of captured insects (sub-figure A)<br> * dN -- the smoothed time derivative of N, by experiment, (subfigure C)<br> <br> * `fig_4E_data.csv` -- the data for figure 4 E. <br> * id -- matches the metadata id (see above)<br> * period -- the period in seconds (X axis)<br> * power -- Autocorrelation value, i.e. ACF, (Y axis)<br> <br> * `fig_4BDF_meta.csv` -- describes the metadata for figure 4 B,D,F. Fields descriptions same as for `fig_4AC_meta.csv`.<br> <br> * `fig_4BD_data.csv` -- the data for figure 4 B,D. Fields descriptions same as for `fig_4AC_data.csv` <br> <br> * `fig_4F_data.csv` -- the data for figure 4 E. Fields descriptions same as for `fig_4E_data.csv` <br> <br> * `fig_5_meta.csv` -- describes the metadata for figure 5<br> * id -- the unique identifier of a replicate x taxon <br> * label_itc -- a numerical label from the Insect Tuboid Classifier for the taxon<br> * taxon -- the name of the taxon in the manuscript/figure<br> * device -- a unique identifier of a device (one sticky pi)<br> * start_datetime -- start time of the experiment<br> * end_datetime -- end time of the experiment<br> * vinegar_bait -- "Y" or "N", whether this replicate (week x device) was baited with apple cider vinegar (see manuscript)<br> * <br> * `fig_5_data.csv` -- the data for figure 5<br> * id -- matches the metadata id (see above)<br> * wt -- Warped time, in second since 1970-01-01 (epoch). Warped time is used to account for changes in day length (see manuscript) <br> * wzt -- Warped Zeitgeber time, in seconds. Warped time since the sunrise<br> * N -- The number of insect detected for this id (taxon x device x week)<br> <br> <br> * `fig_6A_S4_meta.csv` -- describes the metadata for figure 6A and S4 . Fields are identical to`fig_5_meta.csv` (minus `vinegar_bait`, which was only in figure 5)<br> <br> * `fig_6A_S4_data.csv` -- the data for figures 6A and S4. Fields are identical to`fig_5_data.csv` <br> <br> <br> * `fig_6B_data.csv` -- the data for figures 6A and S4. Fields are identical to`fig_5_data.csv` <br> * D1 -- the first dimension (multidimensional scaling)<br> * D2 -- the second dimension<br> * taxon -- the name of the taxon<br> * rep -- the bootstrap replicate (see manuscript). The first replicate (rep = 1) is just the original data (not resampled)<br> <br> <br> * `fig_S2DE_data.csv` -- the data for figures S2 D and E. Each row is an instance (putative insect) from given validation file<br> * filename -- the validation file<br> * in_gt -- whether the instance is present in the ground truth (human-annotated) image<br> * in_im -- whether the same instance is present in the UID-predicted image<br> * area -- the area of the instance, in pixels<br> <br> ​<br>