cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.nyx5ss
title: Occurrence Download

description: A dataset containing 1286 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spilogale gracilis Merriam, 1890"
 ]
}

 The dataset includes 1286 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088623-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ssfg6v
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-9969.0",
 "Country is Italy",
 "GadmGid is ITA",
 "TaxonKey is Saga pedo (Pallas, 1771)"
 ]
}

 The dataset includes 35 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063017-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gqsqp8
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "Issue is Geodetic datum assumed WGS84",
 "HasCoordinate is true",
 {
 "or" : [
 "TaxonKey is Escobaria Britton & Rose",
 "TaxonKey is Escobaria leei Rose",
 "TaxonKey is Escobaria N.P.Taylor, 1983"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 38 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043982-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ec61xo
title: Occurrence Download

description: A dataset containing 153644 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aeshnidae"
 ]
}

 The dataset includes 153644 records from 437 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088628-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzwted
title: Occurrence Download

description: A dataset containing 929 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chuquiraga jussieui J.F.Gmel."
 ]
}

 The dataset includes 929 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044002-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uk8ezx
title: Occurrence Download

description: A dataset containing 1807 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is South Africa",
 "TaxonKey is Acacia longifolia (Andrews) Willd."
 ]
}

 The dataset includes 1807 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007199-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6t4tsz
title: Occurrence Download

description: A dataset containing 1087 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cycas armstrongii Miq."
 ]
}

 The dataset includes 1087 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044007-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uemsox
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Austropetaliidae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 64 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088631-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4vfpdj
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is South Africa",
 "OccurrenceStatus is Present",
 "TaxonKey is Alisma plantago-aquatica L."
 ]
}

 The dataset includes 56 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007218-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.awgrt6
title: Occurrence Download

description: A dataset containing 2930 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Machilus thunbergii Siebold & Zucc.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2930 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009168-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vqb3jj
title: Occurrence Download

description: A dataset containing 196 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stegodon Falconer & Cautley, 1847",
 "BasisOfRecord is Fossil"
 ]
}

 The dataset includes 196 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088632-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ag87cs
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "TaxonKey is Sorbus graeca Gruppe"
 ]
}

 The dataset includes 66 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003408-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wcrm9x
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "Geometry POLYGON((-1.87904 37.65123,1.58367 37.65123,1.58367 39.03571,-1.87904 39.03571,-1.87904 37.65123))",
 "HasCoordinate is true",
 "TaxonKey is Heringia heringi (Zetterstedt, 1843)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 85 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044015-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8u4ulc
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mazama rufina (Bourcier & Pucheran, 1852)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 29 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088636-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nha23k
title: Occurrence Download

description: A dataset containing 585 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "TaxonKey is Teucrium creticum L."
 ]
}

 The dataset includes 585 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003371-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uanbgw
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cycas conferta Chirgwin ex Chirgwin & Wigston"
 ]
}

 The dataset includes 84 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044016-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6yqofv
title: Occurrence Download

description: A dataset containing 3099 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hetaerina americana (Fabricius, 1798)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3099 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088637-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j5g792
title: Occurrence Download

description: A dataset containing 249 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is South Africa",
 "TaxonKey is Ageratum conyzoides L."
 ]
}

 The dataset includes 249 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007208-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.szef8t
title: Occurrence Download

description: A dataset containing 117 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cycas lane-poolei C.A.Gardner"
 ]
}

 The dataset includes 117 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044019-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dr16wc
title: Occurrence Download

description: A dataset containing 1184 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Litoria adelaidensis (Gray, 1841)"
 ]
}

 The dataset includes 1184 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088638-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bcrozi
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uroplectes formosus Pocock, 1890"
 ]
}

 The dataset includes 58 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044020-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qy7o9o
title: Occurrence Download

description: A dataset containing 1308 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agaricia lamarcki Milne Edwards & Haime, 1851",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1308 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088641-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jnt9w6
title: Occurrence Download

description: A dataset containing 761 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cycas media R.Br."
 ]
}

 The dataset includes 761 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044021-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14926724
title: RIME: Model Weights and Dataset for Predicting RNA-RNA Interactions

description: RIME is a deep learning model designed for predicting RNA-RNA interactions. This Zenodo repository contains the model weights and the dataset used for training and evaluation. Please

If this source code is helpful for your research, please cite the following publication:

"Decoding RNA-RNA Interactions: The Role of Low-Complexity Repeats and a Deep Learning Framework for Sequence-Based Prediction"

Adriano Setti†, Giorgio Bini†, Valentino Maiorca, Flaminia Pellegrini, Gabriele Proietti, Dimitrios Miltiadis-Vrachnos, Alexandros Armaos, Julie Martone, Michele Monti, Giancarlo Ruocco, Emanuele Rodolà, Irene Bozzoni, Alessio Colantoni, Gian Gaetano Tartaglia

†Co-first authors *Corresponding authors

This model and dataset are described in our preprint: https://www.biorxiv.org/content/10.1101/2025.02.16.638500v1
DOI: 10.5281/zenodo.15148715
title: RIME: Model Weights and Dataset for Predicting RNA-RNA Interactions

description: RIME is a deep learning model designed for predicting RNA-RNA interactions. This Zenodo repository contains the model weights and the dataset used for training and evaluation.

If this source code is helpful for your research, please cite the following publication:

"Decoding RNA-RNA Interactions: The Role of Low-Complexity Repeats and a Deep Learning Framework for Sequence-Based Prediction"

Adriano Setti†, Giorgio Bini†, Flaminia Pellegrini, Valentino Maiorca, Gabriele Proietti, Dimitrios Miltiadis-Vrachnos, Alexandros Armaos, Julie Martone, Michele Monti, Giancarlo Ruocco, Emanuele Rodolà, Irene Bozzoni, Alessio Colantoni*, Gian Gaetano Tartaglia*

†Co-first authors *Corresponding authors

This model and dataset are described in our preprint: https://www.biorxiv.org/content/10.1101/2025.02.16.638500v1
DOI: 10.15468/dl.ursu3q
title: Occurrence Download

description: A dataset containing 5556 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anthias anthias (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Material sample)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 5556 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002108-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11250622
title: Sion 1640 - Building 283 (LoD-1)

description: Coordinates: N/A Length: 11.41 mWidth: 10.98 mHeight: 8.32 mVertices: 24 Primitives: 12  The Length, Width, Height, Vertices and Primitives listed above have been derived directly from the OBJ file.Main Files:
Filename.glb.obj.xml.mtl0___LoD1__id-283.objLink0___LoD1__id-283.mtlLink0___LoD1__id-283.glbLink11250622_edm.xmlLink11250622_metsmods.xmlLinkThumbnails:
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DOI: 10.5281/zenodo.12687545
title: Sion 1640 - Building 283 (LoD-1)

description: Coordinates: N/A Length: 11.41 mWidth: 10.98 mHeight: 8.32 mVertices: 24 Primitives: 12  The Length, Width, Height, Vertices and Primitives listed above have been derived directly from the OBJ file.Main Files:
Filename.glb.obj.xml.mtl0___LoD1__id-283.objLink0___LoD1__id-283.mtlLink0___LoD1__id-283.glbLink11250622_edm.xmlLink11250622_metsmods.xmlLinkThumbnails:
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DOI: 10.5281/zenodo.12687551
title: Trento 1911 - Building 781

description: Coordinates: N/A Length: 46.58 mWidth: 14.94 mHeight: 26.9 mPoints: 48 Vertices: 276 Primitives: 92 Main Files:
Filename.glb.obj.xmlbuilding_781.glbLinkbuilding_781.objLink11568579_metsmods.xmlLink11568579_edm.xmlLinkThumbnails:
Perspective1000x1000512x512256x256128x128Perspective 1LinkLinkLinkLinkPerspective 2LinkLinkLinkLinkPerspective 3LinkLinkLinkLinkPerspective 4LinkLinkLinkLinkPerspective TopLinkLinkLinkLinkChangelog:   - v0.0.2: Thumbnails added, Description updated with Link Tables.  - v0.0.3: Added XMLs for Europeana Data Model (EDM) and MetsMods.
DOI: 10.5281/zenodo.11568579
title: Trento 1911 - Building 781

description: Coordinates: N/A Length: 46.58 mWidth: 14.94 mHeight: 26.9 mPoints: 48 Vertices: 276 Primitives: 92 Main Files:
Filename.glb.obj.xmlbuilding_781.glbLinkbuilding_781.objLink11568579_metsmods.xmlLink11568579_edm.xmlLinkThumbnails:
Perspective1000x1000512x512256x256128x128Perspective 1LinkLinkLinkLinkPerspective 2LinkLinkLinkLinkPerspective 3LinkLinkLinkLinkPerspective 4LinkLinkLinkLinkPerspective TopLinkLinkLinkLinkChangelog:   - v0.0.2: Thumbnails added, Description updated with Link Tables.  - v0.0.3: Added XMLs for Europeana Data Model (EDM) and MetsMods.
DOI: 10.5281/zenodo.11574707
title: Trento 1936 - Building 2381

description: Coordinates: N/A Length: 12.21 mWidth: 7.79 mHeight: 14.51 mPoints: 12 Vertices: 60 Primitives: 20
DOI: 10.5281/zenodo.12537200
title: Trento 1911 - Building 781

description: Coordinates: N/A Length: 46.58 mWidth: 14.94 mHeight: 26.9 mPoints: 48 Vertices: 276 Primitives: 92 Main Files:
Filename.glb.objbuilding_781.objLinkbuilding_781.glbLinkThumbnails:
Perspective1000x1000512x512256x256128x128Perspective 1LinkLinkLinkLinkPerspective 2LinkLinkLinkLinkPerspective 3LinkLinkLinkLinkPerspective 4LinkLinkLinkLinkPerspective TopLinkLinkLinkLinkChangelog:   - v0.0.2: Thumbnails added, Description updated with Link Tables.
DOI: 10.5281/zenodo.12543375
title: Trento 1936 - Building 2381

description: Coordinates: N/A Length: 12.21 mWidth: 7.79 mHeight: 14.51 mPoints: 12 Vertices: 60 Primitives: 20 Main Files:
Filename.glb.objbuilding_2381.objLinkbuilding_2381.glbLinkThumbnails:
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DOI: 10.5281/zenodo.11574706
title: Trento 1936 - Building 2381

description: Coordinates: N/A Length: 12.21 mWidth: 7.79 mHeight: 14.51 mPoints: 12 Vertices: 60 Primitives: 20 Main Files:
Filename.glb.obj.xmlbuilding_2381.objLinkbuilding_2381.glbLink11574706_metsmods.xmlLink11574706_edm.xmlLinkThumbnails:
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DOI: 10.5281/zenodo.11578269
title: Trento 1936 - Building 1193

description: Coordinates: N/A Length: 11.53 mWidth: 8.15 mHeight: 12.59 mPoints: 12 Vertices: 60 Primitives: 20
DOI: 10.5281/zenodo.12687543
title: Trento 1936 - Building 2381

description: Coordinates: N/A Length: 12.21 mWidth: 7.79 mHeight: 14.51 mPoints: 12 Vertices: 60 Primitives: 20 Main Files:
Filename.glb.obj.xmlbuilding_2381.objLinkbuilding_2381.glbLink11574706_metsmods.xmlLink11574706_edm.xmlLinkThumbnails:
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DOI: 10.5281/zenodo.11563140
title: Trento 1851 - Building 806

description: Coordinates: N/A Length: 18.04 mWidth: 10.15 mHeight: 49.03 mPoints: 12 Vertices: 60 Primitives: 20
DOI: 10.5281/zenodo.11572008
title: Trento 1911 - Building 1183

description: Coordinates: N/A Length: 44.81 mWidth: 15.37 mHeight: 40.35 mPoints: 44 Vertices: 252 Primitives: 84
DOI: 10.5281/zenodo.11578268
title: Trento 1936 - Building 1193

description: Coordinates: N/A Length: 11.53 mWidth: 8.15 mHeight: 12.59 mPoints: 12 Vertices: 60 Primitives: 20 Main Files:
Filename.glb.obj.xmlbuilding_1193.glbLinkbuilding_1193.objLink11578268_metsmods.xmlLink11578268_edm.xmlLinkThumbnails:
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DOI: 10.5281/zenodo.12549579
title: Trento 1936 - Building 1193

description: Coordinates: N/A Length: 11.53 mWidth: 8.15 mHeight: 12.59 mPoints: 12 Vertices: 60 Primitives: 20 Main Files:
Filename.glb.objbuilding_1193.objLinkbuilding_1193.glbLinkThumbnails:
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DOI: 10.5281/zenodo.12687546
title: Trento 1936 - Building 1193

description: Coordinates: N/A Length: 11.53 mWidth: 8.15 mHeight: 12.59 mPoints: 12 Vertices: 60 Primitives: 20 Main Files:
Filename.glb.obj.xmlbuilding_1193.glbLinkbuilding_1193.objLink11578268_metsmods.xmlLink11578268_edm.xmlLinkThumbnails:
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DOI: 10.5281/zenodo.11252135
title: Sion 1760 - Building 62 (LoD-1)

description: Coordinates: N/A Length: 10.26 mWidth: 12.38 mHeight: 11.88 mVertices: 30 Primitives: 16  The Length, Width, Height, Vertices and Primitives listed above have been derived directly from the OBJ file.
DOI: 10.5281/zenodo.11563139
title: Trento 1851 - Building 806

description: Coordinates: N/A Length: 18.04 mWidth: 10.15 mHeight: 49.03 mPoints: 12 Vertices: 60 Primitives: 20 Main Files:
Filename.glb.obj.xmlbuilding_806.objLinkbuilding_806.glbLink11563139_edm.xmlLink11563139_metsmods.xmlLinkThumbnails:
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