cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10694256
title: [IO Islamic 265] آشوب نامۀ هندوستان

description: Âshûbnâma-i-Hindûstân

This manuscript is now IO Islamic 1579 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 265 here with notations and hyperlinks].


 

1579

Âshûbnâma-i-Hindûstân (آشوب نامۀ هندوستان).

Âshûbnâma-i-Hindûstân, or simply Âshûb-i-Hindûstân, a historical mathnawî from the time of the civil wars under Shâhjahân and the struggle of his sons for the empire, A.H. 1067-1069 (A.D. 1657-1659), by an eye-witness of all the events related in this poem, Bihishtî, who was a panegyrist of Sulṭân Murâdbakhsh, and completed this mathnawî before the death of his patron, which took place in A.H. 1071 (A.D. 1660, 1661). Beginning:

كلام سخن سنج را ابتدا – بنام خدايست و نام خدا

Another complete copy of the same is described in Rieu ii. pp. 689 and 690, an incomplete one in No. 1124 of the Bodleian Cat.

Some hemistichs are missing on fol. 93a.

Dated the last of Rajab, A.H. 1182 (A.D. 1768, Dec. 10)

No. 265, ff. 93, 2 coll., each ll. 14; Shikasta; size, 8¾ in. by 5½ in.
DOI: 10.5281/zenodo.10694257
title: [IO Islamic 265] آشوب نامۀ هندوستان

description: Âshûbnâma-i-Hindûstân

This manuscript is now IO Islamic 1579 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 265 here with notations and hyperlinks].


 

1579

Âshûbnâma-i-Hindûstân (آشوب نامۀ هندوستان).

Âshûbnâma-i-Hindûstân, or simply Âshûb-i-Hindûstân, a historical mathnawî from the time of the civil wars under Shâhjahân and the struggle of his sons for the empire, A.H. 1067-1069 (A.D. 1657-1659), by an eye-witness of all the events related in this poem, Bihishtî, who was a panegyrist of Sulṭân Murâdbakhsh, and completed this mathnawî before the death of his patron, which took place in A.H. 1071 (A.D. 1660, 1661). Beginning:

كلام سخن سنج را ابتدا – بنام خدايست و نام خدا

Another complete copy of the same is described in Rieu ii. pp. 689 and 690, an incomplete one in No. 1124 of the Bodleian Cat.

Some hemistichs are missing on fol. 93a.

Dated the last of Rajab, A.H. 1182 (A.D. 1768, Dec. 10)

No. 265, ff. 93, 2 coll., each ll. 14; Shikasta; size, 8¾ in. by 5½ in.
DOI: 10.5281/zenodo.10693929
title: Fatiando a Terra Data: Moon - Topography grid at 10 arc-minute resolution

description: Global 10 arc-minute resolution grid of lunar topography referenced to the Lunar spheroid of Wieczorek (2015).

Note: This is a processed and formatted version of the source dataset below. It's meant for use in documentation and tutorials of the Fatiando a Terra project. Please cite the original authors when using this dataset.

Changes made: 



Expand the spherical harmonic model into a grid.

Convert the radius data into topography by subtracting the radius of the lunar reference sphere of Wieczorek (2015).


Source: Wieczorek, M. A. (2015). Spherical harmonic model of the shape of Earth's Moon: MoonTopo2600p [Data set]. Zenodo. doi:10.5281/zenodo.3870924

Source license: CC-BY

Repository: https://github.com/fatiando-data/moon-topography-10arcmin
DOI: 10.5281/zenodo.10693930
title: Fatiando a Terra Data: Moon - Topography grid at 10 arc-minute resolution

description: Global 10 arc-minute resolution grid of lunar topography referenced to the Lunar spheroid of Wieczorek (2015).

Note: This is a processed and formatted version of the source dataset below. It's meant for use in documentation and tutorials of the Fatiando a Terra project. Please cite the original authors when using this dataset.

Changes made: 



Expand the spherical harmonic model into a grid.

Convert the radius data into topography by subtracting the radius of the lunar reference sphere of Wieczorek (2015).


Source: Wieczorek, M. A. (2015). Spherical harmonic model of the shape of Earth's Moon: MoonTopo2600p [Data set]. Zenodo. doi:10.5281/zenodo.3870924

Source license: CC-BY

Repository: https://github.com/fatiando-data/moon-topography-10arcmin
DOI: 10.5281/zenodo.10556613
title: Seed rain as a propagule source for restoration of semi-arid floodplain old fields - Data set

description: This archieve contains the data produced in the study of seed rain as a propagule source for restoration of semi-arid floodplain old fields and will be linked to the journal article once accepted.
DOI: 10.5281/zenodo.10556614
title: Seed rain as a propagule source for restoration of semi-arid floodplain old fields - Data set

description: This archieve contains the data produced in the study of seed rain as a propagule source for restoration of semi-arid floodplain old fields and will be linked to the journal article once accepted.
DOI: 10.6084/m9.figshare.25267087
title: Tree canopy air temperature and tree transpiration dataset.

description: Two tree species were involved and measured in Adelaide: White Cedar (Melia azedarach, deciduous broadleaf) and Grey Box (Eucalyptus microcarpa, evergreen broadleaf). Tree sap flow was measured by SFM and then adjusted to estimate tree transpiration. Tree canopy air temperature was measured by iButton sensors (DS1923 model).
DOI: 10.6084/m9.figshare.25267087.v1
title: Tree canopy air temperature and tree transpiration dataset.

description: Two tree species were involved and measured in Adelaide: White Cedar (Melia azedarach, deciduous broadleaf) and Grey Box (Eucalyptus microcarpa, evergreen broadleaf). Tree sap flow was measured by SFM and then adjusted to estimate tree transpiration. Tree canopy air temperature was measured by iButton sensors (DS1923 model).
DOI: 10.6084/m9.figshare.16649996
title: Additional file 2 of A novel immune subtype classification of ER-positive, PR-negative and HER2-negative breast cancer based on the genomic and transcriptomic landscape

description: Additional file 2: Table S2. A comprehensive gene set that including 1480 genes. Table S3. The immune subtype annotation of each patients in the METABRIC cohort. Table S5. List of 8 immune molecular signatures.
DOI: 10.6084/m9.figshare.16649996.v1
title: Additional file 2 of A novel immune subtype classification of ER-positive, PR-negative and HER2-negative breast cancer based on the genomic and transcriptomic landscape

description: Additional file 2: Table S2. A comprehensive gene set that including 1480 genes. Table S3. The immune subtype annotation of each patients in the METABRIC cohort. Table S5. List of 8 immune molecular signatures.
DOI: 10.7266/n7d50kct
title: CTD profiles, Main Pass, Mobile Bay, Alabama, April 3, 2016
DOI: 10.5281/zenodo.10694293
title: ЎЗБЕК ХАЛҚ МУСИҚА МАДАНИЯТИ ТАРИХИГА НАЗАР
DOI: 10.5281/zenodo.10694294
title: ЎЗБЕК ХАЛҚ МУСИҚА МАДАНИЯТИ ТАРИХИГА НАЗАР
DOI: 10.6084/m9.figshare.21368779
title: Additional file 3 of Lrpap1 deficiency leads to myopia through TGF-β-induced apoptosis in zebrafish

description: Additional file 2. Supplementary Table S1. Tissue gradient dehydration procedure before paraffin section.
DOI: 10.26078/x7ez-2635
title: Data for: Channel Response to Flow Augmentation: Diamond Fork River, UT Dataset
DOI: 10.6084/m9.figshare.21368779.v1
title: Additional file 3 of Lrpap1 deficiency leads to myopia through TGF-β-induced apoptosis in zebrafish

description: Additional file 2. Supplementary Table S1. Tissue gradient dehydration procedure before paraffin section.
DOI: 10.6084/m9.figshare.25246600.v1
title: VCF_file_RN

description: <i>Rattus norvegicus</i> is a worldwide pest in rural landscapes. Despite its ubiquity, there has been limited exploration into its dispersal capabilities within these environments. We addressed this issue using RAD-seq markers of 93 individuals captured in 16 farms along two perpendicular transects, a river and a road, in a rural landscape in central Argentina. A matrix of 764 SNPs was obtained and used for population genetics and kinship analyses. No clear pattern of population structure was identified, suggesting a high level of gene flow among all samples. Nevertheless, farms from neighbouring localities exhibited a tendency to cluster together in the neighbour-joining tree.. We detected a pattern of isolation by distance along the road but not along the river, and also the presence of half and full siblings at distances longer than 30 km in both transects, suggesting both active and passive dispersal by human transport. We conclude that the road acts as a corridor through generations, associated to a pattern of isolation-by-distance; however we could not detect any discernible pattern along the river. Nevertheless, we found a few relatives at considerable distances along the river, suggesting that watercourses may act as corridors but in a single generation. These findings will help to understand why this species is difficult to control in farms when control actions are conducted individually by each farmer.
DOI: 10.6084/m9.figshare.23600910
title: Dataset Files

description: Set of 17 excel files of the extracted and harmonised data from CETESB registries.
Every excel file correspond to a yearly publication of the CETESB Registry for the period 2004-2020.
DOI: 10.17909/fpzr-as35
title: Data from the paper entitled "PANORAMIC: A Pure Parallel Wide Area Legacy Imaging Survey at 1 to 5 Micron"
DOI: 10.5281/zenodo.10684445
title: Fisher_for_vcf dataset and results

description: Dataset and results of https://github.com/gael-millot/fisher_for_vcf
DOI: 10.5281/zenodo.10684495
title: Fisher_for_vcf dataset and results

description: Dataset and results of https://github.com/gael-millot/fisher_for_vcf
DOI: 10.5281/zenodo.10684444
title: Fisher_for_vcf dataset and results

description: Dataset and results of https://github.com/gael-millot/fisher_for_vcf
DOI: 10.5281/zenodo.10694328
title: Fisher_for_vcf dataset and results

description: Dataset and results of https://github.com/gael-millot/fisher_for_vcf
DOI: 10.5281/zenodo.10493772
title: Dataset for paper "Prediction of Covid-19 spreading and optimal coordination of counter-measures: From microscopic to macroscopic models to Pareto fronts"

description: This dataset is used in the Math+ project EF4-13 "Modeling Infection Spreading and Counter-Measures in a Pandemic Situation Using Coupled Models".

It is used in the paper "Prediction of Covid-19 spreading and optimal coordination of counter-measures: From microscopic to macroscopic models to Pareto fronts" by Wulkow et al. to initialize the ODE model described in the paper to perform the epidemic simulation studies for Berlin.
DOI: 10.5281/zenodo.10493771
title: Dataset for paper "Prediction of Covid-19 spreading and optimal coordination of counter-measures: From microscopic to macroscopic models to Pareto fronts"

description: This dataset is used in the Math+ project EF4-13 "Modeling Infection Spreading and Counter-Measures in a Pandemic Situation Using Coupled Models".

It is used in the paper "Prediction of Covid-19 spreading and optimal coordination of counter-measures: From microscopic to macroscopic models to Pareto fronts" by Wulkow et al. to initialize the ODE model described in the paper to perform the epidemic simulation studies for Berlin.
DOI: 10.5281/zenodo.10694284
title: SSTDev2024

description: Dataset, containing all the custom-made MATLAB codes to obtain Figures and results from the paper:

 "Somatostatin interneurons control the timing of developmental desynchronization in cortical networks"
DOI: 10.5281/zenodo.10694285
title: SSTDev2024

description: Dataset, containing all the custom-made MATLAB codes to obtain Figures and results from the paper:

 "Somatostatin interneurons control the timing of developmental desynchronization in cortical networks"
DOI: 10.15468/bcemu2
title: 2021 - DDAEU - Unité de traitement et de valorisation des déchets ménagers et assimilés sur la commune du Moule-Inven faune Gilles Leblond - 2021

description: Etat-initial de la faune sur le site
DOI: 10.7266/n75x279z
title: CTD data at Main Pass, Mobile Bay, April 19, 2016
DOI: 10.6084/m9.figshare.25267189
title: 表S1.docx

description: Statistical analysis of fecal and serum BAs
DOI: 10.6084/m9.figshare.25267189.v1
title: 表S1.docx

description: Statistical analysis of fecal and serum BAs
DOI: 10.6084/m9.figshare.12980655
title: Genomic amplification of long noncoding RNA HOTAIRM1 drives anaplastic thyroid cancer progression via repressing miR-144 biogenesis

description: Genomic aberrations are frequently found in anaplastic thyroid cancer (ATC). However, the functional genes in aberrantly genomic regions are largely unclear. In this study, we identified a long noncoding RNA (lncRNA) HOTAIRM1, whose encoding gene was amplified and expression was upregulated in ATC compared with papillary thyroid cancer and normal thyroid. Increased genomic copy number and expression of <i>HOTAIRM1</i> were both correlated with poor survival of ATC patients. Functional assays revealed that HOTAIRM1 promoted proliferation, inhibited apoptosis, and promoted migration and invasion of ATC cells <i>in vitro</i>, and promoted ATC tumour growth and metastasis <i>in vivo</i>. HOTAIRM1 was found to bind ILF3, repress the binding between ILF3 and precursor miR-144 (pre-miR-144), block the effects of ILF3 on stabilizing pre-miR-144, and therefore downregulate pre-miR-144. Intriguingly, HOTAIRM1 was also found to directly bind primary miR-144 (pri-miR-144), repress the binding between pri-miR-144 and DROSHA, block the processing of pri-miR-144 by DROSHA, and therefore upregulate pri-miR-144 and downregulate pre-miR-144. Thus, HOTAIRM1 remarkably downregulated pre-miR-144 and further downregulated miR-144. Knockdown of ILF3 and DROSHA abolished the effects of HOTAIRM1 on pre-miR-144 and miR-144. The expression of miR-144 was downregulated and reversely correlated with HOTAIRM1 in ATC. Via repressing miR-144 biogenesis, HOTAIRM1 upregulated MET and activated AKT signalling. miR-144 overexpression reversed the oncogenic roles of HOTAIRM1 in ATC. Altogether, these findings identified a genomic copy number amplified and highly expressed lncRNA HOTAIRM1, which exerted oncogenic roles via repressing miR-144 biogenesis in ATC. Our data suggested HOTAIRM1 as a potential prognostic biomarker and therapeutic target for ATC.
DOI: 10.6084/m9.figshare.12980655.v1
title: Genomic amplification of long noncoding RNA HOTAIRM1 drives anaplastic thyroid cancer progression via repressing miR-144 biogenesis

description: Genomic aberrations are frequently found in anaplastic thyroid cancer (ATC). However, the functional genes in aberrantly genomic regions are largely unclear. In this study, we identified a long noncoding RNA (lncRNA) HOTAIRM1, whose encoding gene was amplified and expression was upregulated in ATC compared with papillary thyroid cancer and normal thyroid. Increased genomic copy number and expression of <i>HOTAIRM1</i> were both correlated with poor survival of ATC patients. Functional assays revealed that HOTAIRM1 promoted proliferation, inhibited apoptosis, and promoted migration and invasion of ATC cells <i>in vitro</i>, and promoted ATC tumour growth and metastasis <i>in vivo</i>. HOTAIRM1 was found to bind ILF3, repress the binding between ILF3 and precursor miR-144 (pre-miR-144), block the effects of ILF3 on stabilizing pre-miR-144, and therefore downregulate pre-miR-144. Intriguingly, HOTAIRM1 was also found to directly bind primary miR-144 (pri-miR-144), repress the binding between pri-miR-144 and DROSHA, block the processing of pri-miR-144 by DROSHA, and therefore upregulate pri-miR-144 and downregulate pre-miR-144. Thus, HOTAIRM1 remarkably downregulated pre-miR-144 and further downregulated miR-144. Knockdown of ILF3 and DROSHA abolished the effects of HOTAIRM1 on pre-miR-144 and miR-144. The expression of miR-144 was downregulated and reversely correlated with HOTAIRM1 in ATC. Via repressing miR-144 biogenesis, HOTAIRM1 upregulated MET and activated AKT signalling. miR-144 overexpression reversed the oncogenic roles of HOTAIRM1 in ATC. Altogether, these findings identified a genomic copy number amplified and highly expressed lncRNA HOTAIRM1, which exerted oncogenic roles via repressing miR-144 biogenesis in ATC. Our data suggested HOTAIRM1 as a potential prognostic biomarker and therapeutic target for ATC.
DOI: 10.17909/3x02-0q74
title: JWST from paper "The resolved star formation law in NGC 7469 from JWST, ALMA and VLA"
DOI: 10.6084/m9.figshare.8262329
title: Trans-scale correlation calculation of the parameters for mechanical properties from Trans-scale relationship analysis between the pore structure and macro parameters of backfill and slurry.

description: Figure 11's data
DOI: 10.6084/m9.figshare.8262329.v2
title: Trans-scale correlation calculation of the parameters for mechanical properties from Trans-scale relationship analysis between the pore structure and macro parameters of backfill and slurry.

description: Figure 11's data
DOI: 10.6084/m9.figshare.8262329.v1
title: Trans-scale correlation calculation of the parameters for mechanical properties from Trans-scale relationship analysis between the pore structure and macro parameters of backfill and slurry

description: Figure 11's data
DOI: 10.6084/m9.figshare.8786699
title: MOESM2 of Physiological and transcriptome analyses of Opisthopappus taihangensis in response to drought stress

description: Additional file 2: Table S2. The KEGG pathway analysis of up-regulated DEGs from HvsCK.
DOI: 10.6084/m9.figshare.8786699.v1
title: MOESM2 of Physiological and transcriptome analyses of Opisthopappus taihangensis in response to drought stress

description: Additional file 2: Table S2. The KEGG pathway analysis of up-regulated DEGs from HvsCK.
DOI: 10.6084/m9.figshare.8786702
title: MOESM3 of Physiological and transcriptome analyses of Opisthopappus taihangensis in response to drought stress

description: Additional file 3: Table S3. The KEGG pathway analysis of down-regulated DEGs from HvsCK.
DOI: 10.6084/m9.figshare.8786702.v1
title: MOESM3 of Physiological and transcriptome analyses of Opisthopappus taihangensis in response to drought stress

description: Additional file 3: Table S3. The KEGG pathway analysis of down-regulated DEGs from HvsCK.
DOI: 10.6084/m9.figshare.8786711
title: MOESM4 of Physiological and transcriptome analyses of Opisthopappus taihangensis in response to drought stress

description: Additional file 4: Table S4. The FPKM of proline biosynthetic genes in H group, L group and CK.
DOI: 10.6084/m9.figshare.8786711.v1
title: MOESM4 of Physiological and transcriptome analyses of Opisthopappus taihangensis in response to drought stress

description: Additional file 4: Table S4. The FPKM of proline biosynthetic genes in H group, L group and CK.
DOI: 10.6084/m9.figshare.12456779.v1
title: Additional file 1 of Antibody targeting tumor-derived soluble NKG2D ligand sMIC reprograms NK cell homeostatic survival and function and enhances melanoma response to PDL1 blockade therapy

description: Additional file 1. Supplement Material and Methods. Table S1, Figures S1-S5.
DOI: 10.25345/c5h98zq66
title: MassIVE MSV000094154 - Alterations in solubility reveal proteins impacted by aging and impaired proteostasis
title: Detergent-insoluble protein fractions obtained from the hippocampus and cortex of C57 mice were compared between young (15 weeks, n=15) and aged mice (100 weeks, n=13).
DOI: 10.6084/m9.figshare.25039716
title: UV-B Halotolerant Bacteria from Marakkanam Saltpan and Biology of UV-B Tolerant <i>Pontibacillus salipaludis</i> Based on Whole Genome Sequencing

description: Saltpans in South India experience intense sunlight and ultraviolet radiation (UV). Therefore, it was hypothesized that halophilic bacteria living there could tolerate UV radiation. To test this, sediment and water samples from the Marakkanam Saltpan were collected and exposed to an artificial UV-B lamp. After irradiation, an aliquot of the sample was spread on nutrient agar (prepared in sterilized source water), and two bacterial strains were obtained, named SBO and SBY. Based on 16S rRNA gene phylogeny, these strains were identified as <i>Bacillus</i> sp. and <i>Pontibacillus salipaludis,</i> respectively. Another aliquot of the UV-B-exposed sample was inoculated into the nutrient broth (in sterilized source water), and incubated for a week in the dark. Later, it was subjected to Illumina MiSeq-based sequencing for the V3-V4 region (16S rRNA gene<i>).</i> Results revealed the presence of 13 bacterial phyla. However, the phylum Bacillota (48.59%) and Pseudomonadota (27.36%) accounted for more than 75% of the diversity. <i>Pontibacillus</i> was the most abundant genus, accounting for 44% of total bacterial diversity. The whole genome of <i>P. salipaludis</i> was sequenced on Illumina HiSeqX to decipher possible genes and pathways involved in UV-B tolerance. The genome size was estimated to be 4.05 MB, with a mean G + C content of 40.82%. RASTtk-based genome annotation revealed 4217 coding sequences and 78 RNAs. Related to the UV-B tolerance, sixteen genes involved in carotenoid and prodigiosin biosynthetic pathways were found. antiSMASH showed the presence of terpene-type carotenoids. More than sixty genes involved in various DNA repair pathways were found.
DOI: 10.15124/cff061d7-92fe-47db-b78c-22122bbff4af
title: Post-Synthetic Silver Ion and Sulfurization Treatment for Enhanced Performance in Sb2Se3 Water Splitting Photocathodes

description: Input and output files for density functional theory calculations on the structure and electronic properties of the Sb2Se3(001) surface modified with Sb, Se, Ag, and S as reported in the paper 'Post-Synthetic Silver Ion and Sulfurization Treatment for Enhanced Performance in Sb2Se3 Water Splitting Photocathodes' published in Advanced Functional Materials.
DOI: 10.6084/m9.figshare.25039716.v1
title: UV-B Halotolerant Bacteria from Marakkanam Saltpan and Biology of UV-B Tolerant <i>Pontibacillus salipaludis</i> Based on Whole Genome Sequencing

description: Saltpans in South India experience intense sunlight and ultraviolet radiation (UV). Therefore, it was hypothesized that halophilic bacteria living there could tolerate UV radiation. To test this, sediment and water samples from the Marakkanam Saltpan were collected and exposed to an artificial UV-B lamp. After irradiation, an aliquot of the sample was spread on nutrient agar (prepared in sterilized source water), and two bacterial strains were obtained, named SBO and SBY. Based on 16S rRNA gene phylogeny, these strains were identified as <i>Bacillus</i> sp. and <i>Pontibacillus salipaludis,</i> respectively. Another aliquot of the UV-B-exposed sample was inoculated into the nutrient broth (in sterilized source water), and incubated for a week in the dark. Later, it was subjected to Illumina MiSeq-based sequencing for the V3-V4 region (16S rRNA gene<i>).</i> Results revealed the presence of 13 bacterial phyla. However, the phylum Bacillota (48.59%) and Pseudomonadota (27.36%) accounted for more than 75% of the diversity. <i>Pontibacillus</i> was the most abundant genus, accounting for 44% of total bacterial diversity. The whole genome of <i>P. salipaludis</i> was sequenced on Illumina HiSeqX to decipher possible genes and pathways involved in UV-B tolerance. The genome size was estimated to be 4.05 MB, with a mean G + C content of 40.82%. RASTtk-based genome annotation revealed 4217 coding sequences and 78 RNAs. Related to the UV-B tolerance, sixteen genes involved in carotenoid and prodigiosin biosynthetic pathways were found. antiSMASH showed the presence of terpene-type carotenoids. More than sixty genes involved in various DNA repair pathways were found.
DOI: 10.6084/m9.figshare.8786813
title: Additional file 2: of Hepatic transcriptome profile of sheep (Ovis aries) in response to overgrazing: novel genes and pathways revealed

description: Table S2. RNA-Seq data of all identified genes (nâ =â 12,860) in the study. (XLSX 1428 kb)
DOI: 10.6084/m9.figshare.8786813.v1
title: Additional file 2: of Hepatic transcriptome profile of sheep (Ovis aries) in response to overgrazing: novel genes and pathways revealed

description: Table S2. RNA-Seq data of all identified genes (nâ =â 12,860) in the study. (XLSX 1428 kb)