cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.zwivlx
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Gambusia nicaraguensis Günther, 1866",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 143 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019360-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.65vv47
title: Occurrence Download

description: A dataset containing 1503 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geranium arabicum Forssk."
 ]
}

 The dataset includes 1503 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095404-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9di8hh
title: Occurrence Download

description: A dataset containing 3249085 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is b8323864-602a-4a7d-9127-bb903054e97d",
 "Year 2018-2018",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 3249085 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012432-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8izwwk
title: Occurrence Download

description: A dataset containing 1028 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cryptocarya aschersoniana Mez"
 ]
}

 The dataset includes 1028 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002919-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j905kc
title: Occurrence Download

description: A dataset containing 147 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Pigeon colombin 2007 - 2011 Coordonnées GPS Lambert 93"
 ]
}

 The dataset includes 147 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025866-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9qn4ej
title: Occurrence Download

description: A dataset containing 1155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DecimalLatitude is greater than or equal to 54.5617",
 "DecimalLatitude is less than or equal to 63",
 "DecimalLongitude is greater than or equal to 4.63",
 "DecimalLongitude is less than or equal to 20",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2010",
 "TaxonKey is one of (Andrena cineraria, Andrena cineraria, Andrena cineraria (Linnaeus, 1758), Andrena cineraria (Linnaeus, 1758), 110185525, 157809328, 130505881, Andrena cineraria (Linnaeus, 1758), 161535655, Andrena cineraria (Linnaeus, 1758), Andrena cineraria (Linnaeus, 1758), Andrena cineraria (Linnaeus, 1758), Andrena cineraria (Linnaeus, 1758), Andrena cineraria (Linnaeus, 1758), Andrena cineraria (Linné, 1758), Andrena cineraria (Linnaeus, 1758), Andrena danuvia E.Stöckhert, 1950, 152018439, Nomada goodeniana (Kirby, 1802), Nomada lathburiana (Kirby, 1802), Andrena vaga Panzer, 1799)"
 ]
}

 The dataset includes 1155 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095457-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y27mul
title: Occurrence Download

description: A dataset containing 867656 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "TaxonKey is Nymphalidae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 867656 records from 234 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010257-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.th9zz4
title: Occurrence Download

description: A dataset containing 1934 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Phlebotomus perfiliewi"
 ]
}

 The dataset includes 1934 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047479-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6k8ve
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sinclairia caducifolia"
 ]
}

 The dataset includes 38 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047480-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jsb76m
title: Occurrence Download

description: A dataset containing 365699 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 countrycode countrycode,
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, countrycode, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, countrycode, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, countrycode, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, countrycode, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, countrycode, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, countrycode, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.decimallatitude &gt;= 43.16746
 AND occurrence.decimallatitude &lt;= 46.00666
 AND (occurrence.decimallongitude &gt;= 3.78571 AND occurrence.decimallongitude &lt;= 5.58972)
 AND GBIF_WITHIN('POLYGON ((3.78571 43.4783, 4.83013 43.16746, 5.58972 43.35761, 5.39982 46.00666, 4.02308 45.97368, 3.78571 43.4783))', occurrence.decimallatitude, occurrence.decimallongitude) = TRUE
 AND occurrence.hascoordinate = TRUE
 AND occurrence.hasgeospatialissues = FALSE
 AND occurrence.publishingorgkey = '1928bdf0-f5d2-11dc-8c12-b8a03c50a862'
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL AND occurrence.hascoordinate = TRUE)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year",
 occurrence.countrycode

 The dataset's 365699 records were derived from 2669 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047457-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13903500
title: Membrane staining and segmentation of a developing mouse embryo from 4 to 26 cells

description: Intent

The role of this dataset is to provide an example of segmentable and trackable data using signal from cell membrane. This dataset contains one file with the pre-processed imaged embryo (imaging.zip -> imaging.tif) and one file with the outcome of a segmentation using Cellpose (segmentation.zip -> segmentation.tif).



This embryo corresponds to the embryo "C1" in the original publication


Animal

This set of data represents a mouse embryo developing from the 4-cell stage. The embryo at the last processed timepoint has 26 cells. The mother and the father were both mTmG animals (tdTomato anchored at the membrane of the cells).



Details can be found in the original publication


Culture conditions

The embryo was imaged in an inverted SPIM from Luxendo (now Bruker), laying at the bottom of a PFE imaging dish. The embryo developed in a small pocket made by deforming the PFE with a glass tip. We used approx. 150μL of KSOM-AA to cutlure the embryos at 37ºC ± 0.2ºC in 5% CO2 and 5% O2. The medium was covered with approx. 100μL of mineral oil.



Details can be found in the original publication


Imaging conditions

The tdTomato was excited with a 561nm laser using as little intensity as possible (0% in the settings + a small fraction leaking through the shutter). We used a 561 LP filter to acquire the signal. Imaging was set with a lateral resolution of 0.208μm and a axial resolution of 1μm. Because of technical issues with the stage of the microscope at the time, the resulting axial resolution was ultimately 1.338μm. In total, 181 slices were acquired per time point. Two consecutive timepoints start with 15 minutes of interval.

Although this embryo was imaged for a longer period of time, this dataset shows only the first 117 timepoints.



Details can be found in the original publication


Processing conditions




Operation
Lateral resolution
Axial resolution
File


Imaging
0.208 μm
1.338 μm
-


Cropping
0.208 μm
1.338 μm
-


Lateral binning (average)
0.416 μm
1.338 μm
-


Isotropic rescaling
0.416 μm
0.416 μm
-


Lateral binning (average)
0.832 μm
0.832 μm
imaging.tif


Segmentation (cellpose)
0.832 μm
0.832 μm
segmentation.tif
DOI: 10.15468/dl.khg443
title: Occurrence Download

description: A dataset containing 1143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepis terglouensis (Hacq.) A.Kern.",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null"
 ]
}

 The dataset includes 1143 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008975-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8zckag
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Niceforonia babax (Lynch, 1989)"
 ]
}

 The dataset includes 30 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008976-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bpr4u9
title: Occurrence Download

description: A dataset containing 1836 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is North America",
 "TaxonKey is Cypripedium reginae Walter"
 ]
}

 The dataset includes 1836 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008978-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xsvgt8
title: Occurrence Download

description: A dataset containing 116357 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "StateProvince is Carchi"
 ]
}

 The dataset includes 116357 records from 256 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008970-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/zcddcx8gmn.1
title: Pure and Fibre-Hybrid Carbon Fibre and Polypropylene 3D Woven Composite Charpy Impact Test Results

description: Energy absorption and sample dimension measurements for both a pure carbon fibre layer-to-layer 3D woven composite and a fibre-hybrid carbon fibre and polypropylene layer-to-layer 3D woven composite for both warp and weft samples is presented. The data was obtained following ISO 179-1:2023 test standard and used to obtain values of Charpy impact strength, or energy absorption per unit volume, for both materials in the warp and weft direction.
DOI: 10.15468/dl.karkt8
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bolitoglossa orestes Brame & Wake, 1962"
 ]
}

 The dataset includes 37 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008979-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xeuk95
title: Occurrence Download

description: A dataset containing 40373 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepis sancta (L.) Bornm.",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null"
 ]
}

 The dataset includes 40373 records from 704 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008977-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d7k5sx
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepis viscidula Froel.",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null"
 ]
}

 The dataset includes 35 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008981-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wy945g
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Niceforonia brunnea (Lynch, 1975)"
 ]
}

 The dataset includes 41 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008983-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5nv3m4
title: Occurrence Download

description: A dataset containing 3112 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepis sibirica L.",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null"
 ]
}

 The dataset includes 3112 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008982-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ns3bxg
title: Occurrence Download

description: A dataset containing 677 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepis palaestina (Boiss.) Bornm.",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null"
 ]
}

 The dataset includes 677 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008984-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bfv8yz
title: Occurrence Download

description: A dataset containing 2002 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anaxyrus boreas halophilus (Baird & Girard, 1853)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1850",
 "StateProvince is California"
 ]
}

 The dataset includes 2002 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008985-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7cw8z9
title: Occurrence Download

description: A dataset containing 3632 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepis pontana (L.) Dalla Torre",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null"
 ]
}

 The dataset includes 3632 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008986-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nfxpgd
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepis syriaca (Bornm.) Babc. & Navashin",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null"
 ]
}

 The dataset includes 70 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008987-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24431/rw1k8fw
title: Gulf of Alaska female yelloweye rockfish operculum hormone profile data, 2018-2021

description: Data represent approximately annual hormone and isotope values estimated from female yelloweye rockfish opercula to reconstruct individual lifetime reproductive, stress, and chemical profiles. The comma separated file contains hormone and isotope data per opercula growth layer, estimated formation year, and estimated fish age, and fisheries data collected from fish at time of capture (fish length and weight).
DOI: 10.15468/dl.rxpxkb
title: Occurrence Download

description: A dataset containing 2261417 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is one of (Dryocopus pileatus (Linnaeus, 1758))",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 1901",
 "Year is less than or equal to 2019",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2261417 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008980-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ucufak
title: Occurrence Download

description: A dataset containing 238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepis reuteriana Boiss.",
 "OccurrenceStatus is Present",
 "Country is not null",
 "Year is not null"
 ]
}

 The dataset includes 238 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008988-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aaufzj
title: Occurrence Download

description: A dataset containing 1833 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spea hammondii (Baird, 1859)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1850",
 "StateProvince is California"
 ]
}

 The dataset includes 1833 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008989-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axmd94
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bolitoglossa palmata (Werner, 1897)"
 ]
}

 The dataset includes 84 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008992-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24431/rw1k8fx
title: Indigenous Knowledge of bearded seal (Erignathus barbatus), ringed seal (Pusa hispida), and spotted seal (Phoca largha) behaviour and habitat use near Utqiaġvik, Alaska, USA, from 2018 to 2019

description: This data is the summarized Indigenous Knowledge (IK) from interviews with nine Iñupiaq hunters from Utqiaġvik, Alaska, USA. We documented Indigenous Knowledge of bearded, ringed, and spotted seals behaviour and habitat use using semi-directed interviews in November 2018 and September 2019. The IK was summarized in data tables to show the percentage of hunters that shared IK specific to different behaviours and habitat. Additionally areas of species presence were also identified on maps, showing the number of hunters that identified that area as used by the species. The summarized IK was reviewed by the majority of the hunters interviewed and reflects the knowledge shared. The dataset consists of 5 files separate csv files each containing IK for bearded, spotted, and ringed seal specific to behaviours and/or habitat: 1. Ice. 2. Behaviour, 3. Currents & winds, 4. Diving, and 5. Waterbodies or shorelines characteristics. The shape file contains information for all three species on areas they are frequently observed/concentrate.
DOI: 10.24431/rw1k8fy
title: Ringed seal (Pusa hispida) location data from the Beaufort Sea to the Chukchi Sea, July 2011-February 2019

description: This data is part of the satellite telemetry data collected by the North Slope Borough Department of Wildlife Management Shell Baseline Studies Program. Ringed seals were tagged with SPLASH Wildlife Computers ARGOS satellite telemetry transmitters (or "tags"). The tags transmitted locations of the seals, with AROGS measurement error. The data consists of one comma separated file (.csv) that was processed in R 4.1.2 (R Core Team 2021) to correct for ARGOS measurement error and to estimate 'true' locations of the seals. Prior to processing, the first week of data for each seal was removed to avoid impacts on behaviour that may be present from capture and tagging. The R package foieGras (Jonsen & Patterson 2020) was used to estimate the true locations by applying a continuous time state-space model with a maximum velocity of 3.0 m/sec and a 4 hour time step. The data includes seal id, date of location, latitude and longitude of estimated location, and the spatial geometry. The data is projected to Alaska Albers (crs: 3467). The data extends from the Beaufort Sea to the Chukchi Sea, from July 2011 to February 2019, and includes data from 25 ringed seals. Ringed seals are an ice-obligate species that is both abundant and widely distributed throughout the Arctic. They are the primary prey resource for polar bears (Ursus maritimus) and hold significant cultural and subsistence value for Indigenous communities.
DOI: 10.34740/kaggle/dsv/9604996
title: BBC News