cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1051844.10fu
title: SH1051844.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6073/pasta/8e09736f3c37c3554af349f21184b2a8
title: MCR LTER: Coral Reef: Computer Vision: Multi-annotator Comparison of Coral Photo Quadrat Analysis

description: This repository contains the Moorea portion of a larger data package published in conjuncture with: "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation", Beijbom et al. PLOS One, 2015. The rest of the data package is hosted at the Dryad data repository (doi:10.5061/dryad.m5pr3). The larger data package is an aggregate dataset from four Pacific coral reef monitoring projects in: Moorea (French Polynesia), the northern Line Islands, Nanwan Bay (Taiwan) and Heron Reef (Australia). It contains 5090 coral reef survey images, and 251,988 random-point annotations by coral ecology experts. The point-annotations indicate the dominant benthic substrate at 10 to 200 random point locations per image, using a label-set of 20 categories. In addition, 200 images from each location have been cross-annotated by 6 experts, for a total of 7 sets of annotations for each image. This set of cross-annotations can be used to contextualize the performance of automated annotation methods for coral reef ecology. The full data package can also be used by computer-vision and machine learning researchers to develop object classification, image segmentation, and domain transfer learning methods. These data contain a subset of the raw data from which dataset knb-lter-mcr.4 is derived.
DOI: 10.5281/zenodo.14930508
title: Tipsy data from pdkgrav3 simulation of spiral of disk formation
DOI: 10.5281/zenodo.14930509
title: Tipsy data from pdkgrav3 simulation of spiral of disk formation
DOI: 10.34740/kaggle/dsv/10856830
title: Waste categories dataset
DOI: 10.6084/m9.figshare.28497680
title: Supplementary materials: Evaluation of reporting in time-driven activity-based costing studies on cardiovascular diseases: a scoping review

description: <b>These are peer-reviewed supplementary materials for the article</b><b> </b><b>'</b><b>Evaluation of reporting in time-driven activity-based costing studies on cardiovascular diseases: a scoping review</b><b>'</b><b> </b><b>published in the</b><b> </b><b><i>Journal of Comparative Effectiveness Research</i></b><b>.</b><b>Supplementary Table 1: </b>Preferred Reporting Items for Systematic reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) Checklist<b>Supplemental Table 2: </b>Search strategies used in each database<b>Supplemental Table 3:</b> Quality assessment using the TDABC Checklist (part I)<b>Supplemental Table 3: </b>Quality assessment using the TDABC Checklist (part II)<b>Aim:</b> This scoping review evaluates the application of the time-driven activity-based costing (TDABC) methodology in cardiovascular disease (CVD) studies. <b>Materials & methods: </b>The evaluation was conducted using the 32-item TDABC Healthcare Consortium Consensus Statement Checklist. A systematic search was performed in Medline, Embase and Scopus in September 2023, including only full-text, peer-reviewed studies reporting the application of TDABC in CVD research. <b>Results:</b> Twenty studies were included in the review. The positive response rate for individual studies ranged from 31 to 81%. The most frequently addressed checklist item was the clear definition of study objectives, while presenting costs per patient included in the analysis was the least reported item. Although 70% of the studies achieved a positive response rate above 50%, adherence to the TDABC checklist remains inconsistent. <b>Conclusion:</b> There is significant room for improvement in the reporting of TDABC methodology in CVD studies. Providing a more comprehensive and standardized description of the methodology would enhance the utility, reproducibility and accuracy of the information generated, supporting the development of evidence-based health policies and improving accountability in healthcare cost assessments.
DOI: 10.6084/m9.figshare.28497680.v1
title: Supplementary materials: Evaluation of reporting in time-driven activity-based costing studies on cardiovascular diseases: a scoping review

description: <b>These are peer-reviewed supplementary materials for the article</b><b> </b><b>'</b><b>Evaluation of reporting in time-driven activity-based costing studies on cardiovascular diseases: a scoping review</b><b>'</b><b> </b><b>published in the</b><b> </b><b><i>Journal of Comparative Effectiveness Research</i></b><b>.</b><b>Supplementary Table 1: </b>Preferred Reporting Items for Systematic reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) Checklist<b>Supplemental Table 2: </b>Search strategies used in each database<b>Supplemental Table 3:</b> Quality assessment using the TDABC Checklist (part I)<b>Supplemental Table 3: </b>Quality assessment using the TDABC Checklist (part II)<b>Aim:</b> This scoping review evaluates the application of the time-driven activity-based costing (TDABC) methodology in cardiovascular disease (CVD) studies. <b>Materials & methods: </b>The evaluation was conducted using the 32-item TDABC Healthcare Consortium Consensus Statement Checklist. A systematic search was performed in Medline, Embase and Scopus in September 2023, including only full-text, peer-reviewed studies reporting the application of TDABC in CVD research. <b>Results:</b> Twenty studies were included in the review. The positive response rate for individual studies ranged from 31 to 81%. The most frequently addressed checklist item was the clear definition of study objectives, while presenting costs per patient included in the analysis was the least reported item. Although 70% of the studies achieved a positive response rate above 50%, adherence to the TDABC checklist remains inconsistent. <b>Conclusion:</b> There is significant room for improvement in the reporting of TDABC methodology in CVD studies. Providing a more comprehensive and standardized description of the methodology would enhance the utility, reproducibility and accuracy of the information generated, supporting the development of evidence-based health policies and improving accountability in healthcare cost assessments.
DOI: 10.5281/zenodo.10687564
title: Data and R scripts used for the article "Genotyping-by-Sequencing and Morphology Revealed the Role of Polyploidization and Hybridization in the Diversification of the Centaurea aspera L. Complex of Section Seridia (Juss.) DC. (Asteraceae)"

description: This are the data and R scripts used for the article "Genotyping-by-Sequencing and Morphology Revealed the Role of Polyploidization and Hybridization in the Diversification of the Centaurea aspera L. Complex of Section Seridia (Juss.) DC. (Asteraceae)" DOI: https://doi.org/10.3390/plants11151919.

In the Western Mediterranean section, Seridia studies are scarce. In this section, Centaurea aspera forms a complex including four European diploid and one Moroccan autotetraploid subspecies, an allopolyploid, and hybrids among them. Here, we aimed to delimit the different taxa, identify any introgressions, and discuss their evolutionary history. Samples of all taxa were analysed using 1688 SNPs obtained through GBS and were morphologically characterized. Three genetically well-differentiated clusters were observed, corresponding to the allopolyploid C. seridis, the diploid C. aspera and the cryptic autotetraploid C. aspera ssp. gentilii, which is proposed to be considered as a species. Centaurea seridis showed a high isolation by distance, a greater morphological variability, and a lack of interspecific gene flow. Diploid and autotetraploid C. aspera individuals were morphologically similar, and some introgressions were detected in Southern Spain, where new forms may promote diversification. This gene flow might have taken place during the Messinian and before autopolyploidization occurred in Morocco. In the C. aspera complex, current interspecific barriers are strong, while polyploidization may provide a better adaptation to drier environments.
DOI: 10.7910/dvn/hs4nl2
title: Instrumento de coleta de dados
title: Impacto dos PAAs e da Opinião do Auditor nas Decisões de Investidores não institucionais

description: Instrumento de coleta de dados: Impacto dos PAAs e da Opinião do Auditor nas Decisões de Investidores não institucionais
DOI: 10.5281/zenodo.14285986
title: RNAglib Databases Version 2.0.0
DOI: 10.5281/zenodo.14286199
title: RNAglib Databases Version 2.0.0
DOI: 10.5281/zenodo.14625192
title: RNAglib Database Releases

description: v2.0.1 - fix chain capitalization
DOI: 10.5281/zenodo.14930728
title: RNAglib Database Releases
DOI: 10.5281/zenodo.14285985
title: RNAglib Database Releases

description: v2.0.1 - fix chain capitalization
DOI: 10.5281/zenodo.14286095
title: RNAglib Databases Version 2.0.0
DOI: 10.5281/zenodo.14325118
title: RNAglib Databases Version 2.0.0
DOI: 10.5281/zenodo.14325403
title: RNAglib Databases Version 2.0.0
DOI: 10.5281/zenodo.14635910
title: RNAglib Database Releases
DOI: 10.5281/zenodo.14923695
title: RNAglib Database Releases
DOI: 10.15468/dl.tyy46u
title: Occurrence Download

description: A dataset containing 2056993 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "HasCoordinate is true",
 "Year is 2012",
 "Month is March"
 ]
}

 The dataset includes 2056993 records from 368 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000399-250226093636041/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5284/1126711
title: Data from a Trial Trenching at Mill House Farm, Stoke Mandeville, Buckinghamshire, 2017-2021 (HS2 Phase One)

description: This collection comprises of images, site records and a spreadsheet from a trial trench evaluation carried out by COPA (Cotswold Oxford Pre-Construct Archaeology) at Mill House Farm, Stoke Mandeville, Buckinghamshire between November and December 2017.
DOI: 10.15468/dl.ddettd
title: Occurrence Download

description: A dataset containing 75729 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Galium verum L.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 75729 records from 314 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003664-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yfpnf2
title: Occurrence Download

description: A dataset containing 341916 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phyteuma L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 341916 records from 1043 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000403-250226093636041/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/r0e-wet-jxz
title: Oenothera L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15156/bio/sh0024012.10fu
title: SH0024012.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3535/dze-dj4-30f
title: Epilobium ciliatum Raf.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/vm7-frz-87v
title: Viola riviniana Rchb.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15156/bio/sh0024013.10fu
title: SH0024013.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3535/hk9-wf0-nn5
title: Epilobium ciliatum Raf.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/lwk-apg-lk4
title: Epilobium anagallidifolium Lam.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15156/bio/sh0024014.10fu
title: SH0024014.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3535/7vt-xwn-ke5
title: Epilobium ciliatum Raf.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/cvz-bmm-tyn
title: Oenothera L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15156/bio/sh0024015.10fu
title: SH0024015.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3535/kxg-cwe-sdr
title: Oenothera L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/ljr-gmk-ret
title: Circaea alpina L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15156/bio/sh0024016.10fu
title: SH0024016.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3535/0xr-x1m-sgt
title: Rumex obtusifolius subsp. sylvestris (Lam.) Celak.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/x3t-762-h61
title: Oenothera L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15156/bio/sh0024017.10fu
title: SH0024017.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3535/efa-rxk-swk
title: Rumex obtusifolius subsp. sylvestris (Lam.) Celak.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/xjh-xr5-tn7
title: Sisymbrium volgense M. Bieb. ex E. Fourn.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/xs2-1tk-vg5
title: Sisymbrium volgense M. Bieb. ex E. Fourn.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15156/bio/sh0024018.10fu
title: SH0024018.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3535/4c4-3y8-qfh
title: Viola × fennica Nyl.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/dac-zw0-pd9
title: Chaerophyllum prescottii DC.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.