cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/g7nyccnp6z
title: QEDMOD: Fortran program for calculating the model Lamb-shift operator

description: Abstract We present Fortran package QEDMOD for computing the model QED operator ^(hQED)that can be used to account for the Lamb shift in accurate atomic-structure calculations. The package routines calculate the matrix elements of ^(hQED)with the user-specified one-electron wave functions. The operator can be used to calculate Lamb shift in many-electron atomic systems with a typical accuracy of few percent, either by evaluating the matrix element of ^(hQED)with the many-electron wave functio... Title of program: QEDMOD Catalogue Id: AEVE_v1_0 Nature of problem Fortran code for computation of a model QED operator that approximates the Lamb shift in many-electron atoms. Versions of this program held in the CPC repository in Mendeley Data AEVE_v1_0; QEDMOD; 10.1016/j.cpc.2014.12.002 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.6084/m9.figshare.27266889.v2
title: Supplementary Material for: Comprehensive Evaluation of the Cardiovascular Protective Effects of SGLT2 Inhibitors in Patients with Advanced Chronic Kidney Disease: A Real-World Evidence

description: Introduction
Diabetes, kidney disease, and cardiovascular disease have complex interactions and coexistences that significantly worsen a patient's overall health. Previous research results have shown that SGLT2i hypoglycemic drugs can not only effectively control blood sugar in diabetic patients, but also protect the kidneys and heart. This study further focuses on diabetic patients with kidney disease to explore the effectiveness of using SGLT2i hypoglycemic drugs in avoiding heart-related complications or death.
Methods
This is a multi-center retrospective cohort study using the Taipei Medical University Clinical Research Database (TMUCRD) as the data source. This study selected patients who suffered from both type 2 diabetes and chronic kidney disease from 2008/01/01 to 2020/12/31 as the research team. Integrated or separate 4P-MACE (4-point major adverse cardiovascular events) and mortality were the outcomes of this study. The Kaplan Meier curves method and Cox proportional hazard regression analysis were used to explore the association between each influencing factor and the outcome.
Results
A total of 5,005 patients with type 2 diabetes and CKD were included in this study, of which 524 patients were stably treated with SGLT2i, 3,952 patients were treated with DPP4i, and 529 patients were treated with TZD. The results showed that the SGLT2i user group had a significantly lower risk of 4P-MACE compared with the SGLT2i non-user group (HR: 0.68, 95% CI [0.49, 0.95], p=0.024). The SGLT2i group had a significantly lower risk of cardiovascular mortality compared with the DPP4i and TZD groups (HR: 0.37, 95% CI [0.21, 0.65], p&lt;0.001; HR: 0.42, 95% CI [0.20, 0.90], p=0.025). 
Conclusion
This study found that for patients with both diabetes and kidney disease, SGLT2i is a better option than other oral hypoglycemic medications because it can significantly avoid the occurrence of heart-related complications. The results of this study can be used as a reference for clinical medication selection practice.
DOI: 10.17632/866jddy4rg
title: Fiber Pack Structural Defects CT Image Database

description: A database of CT cross section images related to structural defects of fiber pack used for object detectors training, containing 3897 high-resolution CT images.
DOI: 10.17632/ygsdw84t72
title: Escape room files

description: The document corresponds to a translated version in English of the instructions and questions of an escape room activity for the Biophysics program at UFCSPA.
DOI: 10.17632/gfbmx73hn2
title: Skin Cancer Screening of Firefighters and Non-Firefighters: A Study of the American Academy of Dermatology SPOTme Screening Program

description: To better understand which firefighters participate in real-world pragmatic skin cancer detection examinations, we compared the demographics of firefighters participating in the American Academy of Dermatology (AAD) SPOTme skin cancer screening program to the general SPOTme screening population. These data were included in our Research Letter submission to JAAD Dermatology.
DOI: 10.6084/m9.figshare.4776886.v3
title: Photometry and Stellar Masses for GRB Host Galaxies with Emission-line Spectra

description: We present broad-band photometry and SED fits to a sample of GRB host galaxies for which spectra were published by us previously (Kruehler et al., 2015, A&A, 581, 125).<br><br>We collected relevant photometric data from the literature (see references), as well as our own photometry using a variety of telescopes and instruments. These auxiliary data were reduced in a consistent manner using methods described elsewhere (Kruehler et al., 2011, A&A, 534, 108). The used fits files are provided with this data set, where each fits file is named according to the instrument, filter and GRB.<br><br>We then fit the data in a similar manner as described in detail in Schulze et al., 2017, arXiv:161205978 using a modified version of LePhare (Arnouts et al., 1999, MNRAS, 310, 540; Ilbert et al., 2006, A&A, 457, 841) and stellar population synthesis models of Bruzual & Charlot (2003, MNRAS, 344, 1000).<br><br>The resulting files provided with this data release are given in GRBhosts_SEDs.tar.gz, which contains for each GRB of interest:<br>- One pdf containing the plot with the photometry and the best fit model<br>- One ascii file with (ending .spec). This ascii file contains the photometric data (AB system, corrected for Galactic foreground reddening after Schlafly & Finkbeiner 2011, ApJ, 737, 103), in a block of 27 lines with 7 columns. The columns correspond to the magnitude, magnitude error, mean wavelength (AA), width of the filter, the magnitude of the best-fit galaxy template. The last two columns can be ignored. After that, two columns follow with the best fit galaxy template.<br><br><br>The resulting physical parameters of the burst are given in the file GRBhosts_SEDparam.txt with the individual columns as described in the header of the file. The file header also contains more info on the filters used, as well as the fit parameters (cosmology, dust reddening, priors). <br><br><br><br><br><br>
DOI: 10.17632/d6hbk7rm43
title: Data for: A simple and efficient toolset for analysing mitochondrial trafficking in neuronal cells

description: Intracellular trafficking of mitochondria in cortical neurons was measured at different time points ex-vivo. The velocity, distrance travelled and percentage mobile mitochondria were recorded. Data was placed in this datasheet.
DOI: 10.17632/mfnf6v5ssn
title: seedling transplanting on growth and yield performance of Maize (Zea mays L.) for climate change resilience

description: a research data on the effects of seedling transplanting on growth and yield performance of Maize (Zea mays L.) for climate change resilience in Burie District, Northwestern Ethiopia
DOI: 10.17632/ctn5k77ttr
title: Pacific_Clim_tau

description: CM2p1_CTL1860_overrideTau_climPac15S-15N
DOI: 10.17632/tbynrzn5sd
title: RNA-seq on C2C12 myoblasts treated with 1 uM of 20-hydroxyecdysone for 24 hours. Part 2. 20E-treated samples.

description: This dataset is a part 2 of a project on RNA-seq data of C2C12 myoblasts treated with 1 uM of 20-hydroxyecdysone (ecdysterone) for 24 hours.
This dataset contains only 20E-treated samples (7-12CIN)
Device - NextSeq2000 Illumina
Reads - 51 cycles
Kit - TruSeq Stranded mRNA Illumina
Indexes - IDT for Illumina TruSeq RNA UD Indexes

For RNA-seq analysis, C2C12 myoblasts were treated with 1 μM of 20E for 24 hours. The control cells were treated with DMSO. Six biological replicates for each sample were used. Total RNA was extracted using the MagNA Pure Compact RNA Isolation Kit (Roche, Switzerland) on a MagNA Pure Compact instrument (Roche). RNA concentration was measured using a Qubit 4 fluorometer (Thermo Fisher Scientific, USA); RNA quality was assessed using an Agilent 2100 Bioanalyzer (Agilent Technologies, USA). The RNA integrity number (RIN) of the isolated RNA was ≥ 9.5.
cDNA libraries were prepared from 1 μg of total RNA using the TruSeq Stranded mRNA Library Prep Kit (Illumina, USA) according to the manufacturer's instructions. Libraries were sequenced on an Illumina NextSeq 2000 System in single-read mode (51 bp). A minimum of 20 million reads were generated for each sample.

Sample information:

7CIN - 20E-treated (1 uM, 24h), replicate 1;
8CIN - 20E-treated (1 uM, 24h), replicate 2;
9CIN - 20E-treated (1 uM, 24h), replicate 3;
10CIN - 20E-treated (1 uM, 24h), replicate 4;
11CIN - 20E-treated (1 uM, 24h), replicate 5;
12CIN - 20E-treated (1 uM, 24h), replicate 6.
DOI: 10.17632/97yn9np7fx
title: Dataset of Polycyclic aromatic hydrocarbons and trace elements in PM2.5 and PM10 atmospheric particles from two locations in North-Western Greece

description: This dataset presents information regarding PM10, PM2.5, Polycyclic Aromatic Hydrocarbons (PAHs), and trace elements that were obtained from two sampling stations, located in the region of Western Macedonia (North-Western Greece), over the course of a 12-month period
DOI: 10.6084/m9.figshare.8089220.v1
title: Supporting data: Keeping cool in the heat: Behavioral thermoregulation and body temperature patterns in wild vervet monkeys

description: Data and R code in support of manuscript
DOI: 10.17632/4dmy59w389
title: mTORC2 Interactome and Localization Determine Aggressiveness of High-Grade Glioma Cells through Association with Gelsolin

description: Unprocessed Western blot analysis and coomassie-stained SDS-PAGE
DOI: 10.17632/rx92v6md85
title: Acidentes ofídicos no estado do Amapá durante a pandemia de covid-19

description: Dados complementares do manuscrito Acidentes ofídicos no estado do Amapá durante a pandemia de covid-19: perfil epidemiológico e métodos alternativos de tratamento. Uma investigação epidemiológica descritiva e exploratória (2020-2022).
DOI: 10.23641/asha.16968043
title: Sentence repetition as a marker of DLD in Arabic (Taha et al., 2021)

description: <b>Purpose:</b> Research on the typical and impaired grammatical acquisition of Arabic is limited. This study systematically examined the morphosyntactic abilities of Arabic-speaking children with and without developmental language disorder (DLD) using a novel sentence repetition task. The usefulness of the task as an indicator of DLD in Arabic was determined.<b>Method: </b>A LITMUS (Language Impairment Testing in Multilingual Settings) sentence repetition task was developed in Palestinian Arabic (LITMUS-SR-PA-72) and administered to 30 children with DLD (<i>M</i> = 61.50 months, <i>SD </i>= 11.27) and 60 age-matched typically developing (TD) children (<i>M</i> = 63.85 months, <i>SD </i>= 10.16). The task targeted grammatical structures known to be problematic for Arabic-speaking children with DLD (language specific) and children with DLD across languages (language independent). Responses were scored using binary, error, and structural scoring methods.<b>Results:</b> Children with DLD scored below TD children on the LITMUS-SR-PA-72, in general, and in the repetition of language-specific and language-independent structures. The frequency of morphosyntactic errors was higher in the DLD group relative to the TD group. Despite the large similarity of the type of morphosyntactic errors between the two groups, some atypical errors were exclusively produced by the DLD group. The three scoring methods showed good diagnostic power in the discrimination between children with DLD and children without DLD.<b>Conclusions: </b>Sentence repetition was an area of difficulty for Palestinian Arabic–speaking children with DLD. The DLD group demonstrated difficulties with language-specific and language-independent structures, particularly complex sentences with noncanonical word order. Most grammatical errors made by the DLD group resembled those of the TD group and were mostly omissions or substitutions of grammatical affixes or omissions of function words. SR appears to hold promise as a good indicator for the presence or absence of DLD in Arabic. Further validation of these findings using population-based studies is warranted.<br><b>Supplemental Material S1.</b> Average age of acquisition of 50 words included in the LITMUS-SR-PA-71. Data from Lebanese Arabic-speaking children (from Łuniewska et al., 2019).<br>Taha, J., Stojanovik, V., & Pagnamenta, E. (2021). Sentence repetition as a clinical marker of developmental language disorder: Evidence from Arabic.<i> Journal of Speech, Language, and Hearing Research</i>. Advance online publication. https://doi.org/10.1044/2021_JSLHR-21-00244
DOI: 10.6084/m9.figshare.1030188.v1
title: Table 5. Non-covalent-interaction (NCI) surfaces for selected transition states

description: Two complementary catalytic systems are reported for the 1,3-dipolar cycloaddition of azides and iodoalkynes. These are based on two commercially available/readily available copper complexes, [CuCl(IPr)] or [CuI(PPh3)3], which are active at low metal loadings (PPh3 system) or in the absence of any other additive (IPr system). These systems were used for the first reported mechanistic studies on this particular reaction. An experimental/computational-DFT approach allowed to establish that 1) some iodoalkynes might be prone to dehalogenation under copper catalysis conditions and, more importantly, 2) that two distinct mechanistic pathways are likely to be competitive with these catalysts: either through a copper(III) metallacycle or via direct p-activation of the starting iodoalkyne.
DOI: 10.17632/692ctgbrct
title: Mixing properties of binaries {dichloromethane+an alkyl (methyl to pentyl) alkanoate (methanoate to pentanoate), or +an alkane (hexane to hexadecane)}

description: A dataset on mixing properties of binaries containing dichloromethane with alkanes and with alkyl alkanoates, measured at 298.15 K and atmospheric pressure, are presented. This dataset will be used by the authors for its modeling and interpretation through the corresponding publication.
DOI: 10.17632/kvnxgy75mm
title: Hyperspectral data - muringato forest sampling site

description: Leaf-level hyperspectral data collected with two spectroradiometers, ss110 - 340nm - 820nm, ss120 - 635nm - 1100nm. Data was collected in two epochs during the dry and wet season.
DOI: 10.17632/4m96z77k4c
title: Large Eddy Simulations of the Dusty Martian Convective Boundary Layer with MarsWRF

description: The datasets contained herein were used to produce the figures and analysis presented in "Large Eddy Simulations of the Dusty Martian Convective Boundary Layer with MarsWRF" by Wu et al., submitted to JGR-Planets in 2021.
DOI: 10.6084/m9.figshare.7828601.v1
title: swissprot-hsa-kg

description: Swissprot knowledge graph
DOI: 10.6084/m9.figshare.26946898.v1
title: Appendix1seroprevalenceV5.docx.pdf

description: <b>Introduction:</b> Hantavirus infection is a zoonotic disease from rodents to humans, necessitating seroprevalence assessment for disease burden clarification and control measure implementation. This study aimed to estimate global hantaviruses seroprevalence, examining variations by regions, populations or settings.<b>Methods:</b> A comprehensive database search identified studies on human hantaviruses seroprevalence using IgG detection until january 2024. A random-effects meta-analysis estimated pooled seroprevalence, with subgroup analyses for geographical region, population, setting or occupation.<b>Results: </b>Out of 3,382 abstracts reviewed, 110 studies were selected, comprising 81,815 observations and 3207 events. The global seroprevalence was calculated at 2.93% (2.34%-3.67%). In terms of geographical distribution, our analysis encompassed 61 studies from the Americas, where the seroprevalence was estimated at 2.43% (95% CI: 1.71% - 3.46%), 33 studies from Europe indicating a seroprevalence of 2.98% (95% CI: 2.19% - 4.06%), 10 studies from Asia revealing a seroprevalence of 6.84% (95% CI: 3.64% - 12.50%), and 6 studies from Africa demonstrating a seroprevalence of 2.21% (95% CI: 1.82% - 2.71%). Subgroup analysis underscored varying seroprevalence rates across different populations, settings, and occupations, highlighting the necessity for targeted interventions and preventive measures.<b>Conclusion:</b> The analysis reveals a moderate global hantaviruses seroprevalence, emphasizing the viral family's complex transmission dynamics influenced by exposure and geographical factors. This highlights the need for targeted prevention and control strategies.<br>
DOI: 10.17632/8y7s8wwkcy
title: Online Child Sexual Abuse Qualitative Exploration

description: This file contains the qualitative semi-structured guideline used for conducting in-depth interview and key informant interview to explore online child sexual abuse in Bangladesh. The original study was a mixed-method study. This file also contains the "Consolidated criteria for reporting qualitative studies (COREQ)" and the "SAGER guidelines for Sex and Gender equity in research" for this study.
DOI: 10.17632/r286xxc7hz
title: Customer review informativeness dataset

description: This dataset contains 3000 sentences from Amazon product reviews related to Digital cameras and Accessories, written in the period May 1996 - July 2014. The original dataset used to extract these reviews is the "Amazon review data": http://jmcauley.ucsd.edu/data/amazon/ All sentences are labeled by human annotators, based on their level of informativeness. The inter-annotator agreement is calculated by Krippendorff's alpha, where α=0.75.
DOI: 10.17632/zv9wpkvr8g
title: Risk factors for progression from biochemical leak to grade B pancreatic fistula early after pancreatic surgery

description: Retrospective analysis was performed on 60 patients of biochemical leakage after pancreaticoduodenectomy from February 2015 to November 2019 at the Second Hospital of Yibin City. The patients with biochemical leak were divided into POPF progression and non-POPF progression groups. Data on perioperative parameters including age, sex, body mass index (BMI), laboratory findings, CT value of the pancreatic body, main pancreatic duct (MPD) diameter, operation time, intraoperative blood loss and complications, were collected for all pancreaticoduodenectomies.
DOI: 10.17632/zstt35zk4m
title: Table 1

description: Descriptive statistics and odds ratio associated with Trichoteiromania (n=129)
DOI: 10.17632/ysrtx8478v
title: Conflicts and the spread of plagues in pre-industrial Europe
DOI: 10.17632/7sjyfghwxn
title: Data for: Microstructural evolution and mechanical properties of a high yttrium containing tial based alloy densified by spark plasma sintering

description: These data contain original SEM, TEM images and compression test data.
DOI: 10.17632/fbd6kmhmhx
title: Unseen body fluid cells

description: 24 picture with 217 cells
DOI: 10.17632/zw9yxyk9b7
title: The Feature of Cervical Microbiota Associated with the Progression of Cervical Cancer among Reproductive Females

description: In companion paper，we revealed the cervical microbiota diversity and relative abundance in reproductive-age women from HPV infection to cervical cancer. We also identified marker genera of different groups and predicted its functional capabilities which will be helpful for diagnosis, prevention and treatment.
DOI: 10.6084/m9.figshare.28748534.v1
title: Raw Data for Effects of Oxygen Availability on Pollutant Emissions and Particle Oxidative Potentials in Residential Biomass Combustion

description: Data for article
DOI: 10.17632/jy3zjh8rs2
title: Characterization_IDENTIFY_SGRT

description: The aim of the study was to assess the technical performance of the system for both configurations. Phantom measurements were performed to assess the accuracy, precision, reproducibility and temporal stability of the system. Translations of the phantom in lateral, longitudinal, and vertical direction, and rotations around three axes (pitch, roll, and yaw) were performed with an accurate, in-house built, positioning stage.
DOI: 10.17632/pcdj7z58p6
title: Data for: The Line-of-Sight Extinction record at Gale Crater as observed by MSL's Mastcam and Navcam through ∼2500 sols

description: Mean line-of-sight extinction measurements (km^-1) in Gale Crater using images of the northern crater rim from the Mars Science Laboratory Rover, Curiosity. Data relates to the paper: "The Line-of-Sight Extinction record at Gale Crater as observed by MSL's Mastcam and Navcam through ∼2500 sols", C. L. Smith et al. (2020)
DOI: 10.17632/scynkvmt9t
title: Correction of osteopetrosis in the neonate oc/oc murine model after lentiviral vector gene therapy and nongenotoxic conditioning

description: Introduction: Autosomal recessive osteopetrosis (ARO) is a rare genetic disease, characterized by increased bone density due to defective osteoclast function. Most of the cases are due to TCIRG1 gene mutation, leading to severe bone phenotype and death in the first years of life. The standard therapy is the hematopoietic stem cell transplantation (HSCT), but its success is limited by several constraints. Conversely, gene therapy (GT) could minimize the immune-mediated complications of allogeneic HSCT and offer a prompt treatment to these patients. 
Methods: The Tcirg1-defective oc/oc mouse model displays a short lifespan and high bone density, closely mirroring the human condition. In this work, we exploited the oc/oc neonate mice to optimize the critical steps for a successful therapy. 
Results: First, we showed that lentiviral vector GT can revert the osteopetrotic bone phenotype, allowing long-term survival and reducing extramedullary haematopoiesis. Then, we demonstrated that plerixafor-induced mobilization can further increase the high number of HSPCs circulating in peripheral blood, facilitating the collection of adequate numbers of cells for therapeutic purposes. Finally, pre-transplant non-genotoxic conditioning allowed the stable engraftment of HSPCs, albeit at lower level than conventional total body irradiation, and led to long-term survival and correction of bone phenotype, in the absence of acute toxicity. 
Conclusion: These results will pave the way to the implementation of an effective GT protocol, reducing the transplant-related complication risks in the very young and severely affected ARO patients.
DOI: 10.17632/sm2kcp5s66
title: hcc

description: hcc111HCC
DOI: 10.17632/y82wnzcwg8
title: EXO5-DNA Structure and BLM Interactions Direct DNA Resection Critical for ATR-dependent Replication Restart

description: Original western blots
DOI: 10.21233/t5rd-xf17
title: G LA  74 pollen surface sample dataset

description: Raw data for the G LA  74 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/k4c6kd3n5n
title: Terrestrial pollen and charcoal datasets for Emerald Swamp and laymuna paywuta, Bass Strait, Tasmania from 60,000 - 20,000 years

description: These datasets are used in the publication 'Landscape burning facilitated Aboriginal migration into Lutruwita/Tasmania 41,600 years ago'. The include raw counts of pollen and charcoal, as well as sample depths and dates. Dates are based on Bacon age-depth model, using the latest Southern Hemisphere calibration curve (ShCal20). Pollen records only include terrestrial taxa used in the study and not inclusive of spores and aquatics.
DOI: 10.17632/kk5n8wcrth
title: Timing of closure of the Meso-Tethys Ocean: Constraints from remnants of a 141–135 Ma ocean island within the Bangong–Nujiang Suture Zone, Tibetan Plateau

description: The dataset contains U–Pb zircon geochronology, whole-rock geochemistry, and Sr–Nd isotope data of the Zhonggang igneous rocks within the Bangong-Nujiang Suture Zone, Tibetan Plateau.