cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34810/data1826
title: Ibero-American Journals 1898-1959

description: The dataset consists of the text content of the journals published between 1898 through to 1959 in the the collections AHiRA. Archivo Histórico de Revistas Argentinas (https://ahira.com.ar/) at the Instituto de Historia Argentina y Americana "Dr. Emilio Ravignani” (Buenos Aires) and Cultural Magazines of Latin America (CMoLA) (https://digital.iai.spk-berlin.de/viewer/collections/lateinamerikanische-kulturzeitschriften/) of the Ibero-American Institute (Berlin) . The former consists of 898 files and the latter 4698, each file representing a journal issue. The research studied these archives and collections to estimate the representation of women writers in literary databases by leveraging Named Entity Recognition (NER) to extract names and map them to resources like Wikidata, which provide details on gender and occupation. By doing so, we tracked the representation of women writers, comparing their presence with that of male writers. In addition, the analysis was enriched with information on the countries of residence and the languages in which these women wrote, allowing for an estimation of how many were featured in translation or cited as foreign authors. The data was further visualized as bipartite graphs, linking writers to journals and quantifying the frequency of their contributions or citations, with a particular focus on the gender disparity and its evolution over time. Lastly, we examined the occurrence of terms related to translation and versioning, estimating the role of literary translation across various corpora, archives, and collections, highlighting its significance in the dissemination of works by women writers.
description: The files are in JSON format, with the keys being, in case of AHiRA files, "index_in_ahira_list" (the index of the file in the collection), "journal_name_and_issue," "date," and "pages" (structured as a list of tuples, each tuple consisting of page number and textual content of specific page, and, in the case of CMoLA, "index_in_cmola_list" (the index of the file in the "cmola_texts" list of strings we used for our research), "journal_name," "issue_and_date," and "pages," the textual contents of pages numbered starting from zero. 
Given the backend of the CMoLA archive website, there are in our corpus 3514 files containing values of all the keys above, and 1184 with no values for the "journal_name" and/or "issue_and_date" keys. The former contain these values in the file name, and the latter are named "not_identified" followed by the index in our cmola_texts list. The latter is at this stage too large to share, but its content is nevertheless in the uploaded JSON files cumulated.
In the case of AHiRA all 898 files come with specific name of the journal, issue, and date of publication alongside the textual content per se.
description: Pytesseract, 0.3.13
description: NLTK, Python 3.8 or later
description: pandas, 2.2.3
description: re, Python 3
description: OS, Python 3
description: json, Python 3
description: spaCy, Python 3.7 or later
description: Stanza, Python 3.6 or later
description: NetworkX, 3.4.2
DOI: 10.15468/dl.f8v427
title: Occurrence Download

description: A dataset containing 586307 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Insect Species Occurrence Data from Multiple Projects Worldwide with Focus on Bees and Wasps in North America"
 ]
}

 The dataset includes 586307 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019771-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7uqvvg
title: Occurrence Download

description: A dataset containing 586307 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Insect Species Occurrence Data from Multiple Projects Worldwide with Focus on Bees and Wasps in North America"
 ]
}

 The dataset includes 586307 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019769-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r7vhgr
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adonis aestivalis",
 "Country is Croatia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019787-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w3bwqq
title: Occurrence Download

description: A dataset containing 701 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adonis aestivalis",
 "Country is Czechia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 701 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019788-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hfju7k
title: Occurrence Download

description: A dataset containing 161004 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation)",
 "Country is Netherlands",
 "GadmGid is NLD.9.4_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2016-2025"
 ]
}

 The dataset includes 161004 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019689-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3c6p6m
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adonis aestivalis",
 "Country is Bosnia and Herzegovina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019786-250920141307145/datasets/export for details.
DOI: 10.15468/dl.cyemnm
title: Occurrence Download

description: A dataset containing 633911 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((1.6981511274655972 49.046651906842015, 3.11884978277746 49.046651906842015, 3.11884978277746 49.75807316617175, 1.6981511274655972 49.75807316617175, 1.6981511274655972 49.046651906842015))",
 "Year is one of (2019, 2020, 2021, 2022, 2023, 2024, 2025)",
 "KingdomKey is one of (Animalia, Fungi, Plantae)"
 ]
}

 The dataset includes 633911 records from 525 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019722-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5p2efk
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spindasis lohita",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019789-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/26512
title: Chandra X-ray Observatory ObsId 26512

description: Winds, disks, streams and spots: deciphering Cen X-3 during a rare low state
DOI: 10.25574/26959
title: Chandra X-ray Observatory ObsId 26959

description: Probing Plasmas in the Colliding Wind Binary WR 25
DOI: 10.25574/27012
title: Chandra X-ray Observatory ObsId 27012

description: AO-24 LETG/ACIS-S Calibration Observations of RXJ 1856
DOI: 10.15468/dl.5j3mkh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Corydalis decipiens)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019790-250920141307145/datasets/export for details.
DOI: 10.25574/27014
title: Chandra X-ray Observatory ObsId 27014

description: AO-24 Big Dither Observation of Mkn421
DOI: 10.25574/27016
title: Chandra X-ray Observatory ObsId 27016

description: AO-24 Big Dither Observation of Mkn421
DOI: 10.25574/27017
title: Chandra X-ray Observatory ObsId 27017

description: AO-24 Big Dither Observation of Mkn421
DOI: 10.15468/dl.shmbcf
title: Occurrence Download

description: A dataset containing 368 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cercosaura eigenmanni"
 ]
}

 The dataset includes 368 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019791-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ge4x7w
title: Occurrence Download

description: A dataset containing 528 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adonis aestivalis",
 "Country is Poland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 528 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019793-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xr7z3v
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adonis aestivalis",
 "Country is Slovakia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 81 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019795-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uaamb9
title: Occurrence Download

description: A dataset containing 6501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adonis aestivalis",
 "Country is Germany",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6501 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019792-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c6txng
title: Occurrence Download

description: A dataset containing 39149 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Magicicada"
 ]
}

 The dataset includes 39149 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019794-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mrnq6r
title: Occurrence Download

description: A dataset containing 232 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spindasis syama",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 232 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019796-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gvaygw
title: Occurrence Download

description: A dataset containing 662 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección Mastozoológica de la Universidad Distrital Francisco José de Caldas"
 ]
}

 The dataset includes 662 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019797-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ucft4g
title: Occurrence Download

description: A dataset containing 3158 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Corydalis lutea)"
 ]
}

 The dataset includes 3158 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019798-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzgx62
title: Occurrence Download

description: A dataset containing 174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adonis aestivalis",
 "Country is Ukraine",
 "HasCoordinate is true"
 ]
}

 The dataset includes 174 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019799-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qvzhqk
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adonis aestivalis",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 114 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019800-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17098192
title: Bioinformatiha25 Tutorial on Intercellular signaling in Single Cell RNA

description: Here you will find all the materials and instructions needed to follow the hands-on sessions.This tutorial will use two main analysis packages to meet different user preferences and levels of proficiency: a Python-package, i.e. CellPhoneDB, and a R package, i.e. scSeqComm! You may choose to work in either Python or R, depending on your background .

⚙️ Setup Instructions (Before the Tutorial)

To participate in the hands-on sessions, you will need to set up your environment and download the required materials in advance.

📥 Installation



 Python-based analysis: Install the CellPhoneDB package by following the official documentation:https://cellphonedb.readthedocs.io/en/latest/

R-based analysis: Install the Seurat and scSeqComm packages by following their installation guides:



Seurat https://satijalab.org/seurat/articles/install.html

scSeqComm https://gitlab.com/sysbiobig/scseqcomm




⚠️ Installing all the packages is not mandatory — you can use the language you prefer, or simply follow along using the provided pre-rendered HTML walkthroughs if you do not wish to run code locally.

📁 Download the Tutorial Materials 

Download all tutorial materials from the shared repository folder. This includes: a Jupyter notebook (CellPhone.ipynb), a R Markdown script (scSeqComm.Rmd), the datasets (.h5ad for Python and .rds for R) and pre-rendered HTML versions of the tutorials.

🆕 Slides are now available
DOI: 10.5281/zenodo.17209433
title: Bioinformatiha25 Tutorial on Intercellular signaling in Single Cell RNA

description: Here you will find all the materials and instructions needed to follow the hands-on sessions.This tutorial will use two main analysis packages to meet different user preferences and levels of proficiency: a Python-package, i.e. CellPhoneDB, and a R package, i.e. scSeqComm! You may choose to work in either Python or R, depending on your background .

⚙️ Setup Instructions (Before the Tutorial)

To participate in the hands-on sessions, you will need to set up your environment and download the required materials in advance.

📥 Installation



 Python-based analysis: Install the CellPhoneDB package by following the official documentation:https://cellphonedb.readthedocs.io/en/latest/

R-based analysis: Install the Seurat and scSeqComm packages by following their installation guides:



Seurat https://satijalab.org/seurat/articles/install.html

scSeqComm https://gitlab.com/sysbiobig/scseqcomm




⚠️ Installing all the packages is not mandatory — you can use the language you prefer, or simply follow along using the provided pre-rendered HTML walkthroughs if you do not wish to run code locally.

📁 Download the Tutorial Materials 

Download all tutorial materials from the shared repository folder. This includes: a Jupyter notebook (CellPhone.ipynb), a R Markdown script (scSeqComm.Rmd), the datasets (.h5ad for Python and .rds for R) and pre-rendered HTML versions of the tutorials.

🆕 Slides are now available
DOI: 10.48331/scielodata.ujnriu/dmgcdb
title: codebook_lesbianidades_violencia_decisoes_stj.docx

description: Livro de códigos utilizado na pesquisa da qual o artigo deriva.
DOI: 10.48331/scielodata.ujnriu/0krljb
title: listagem_decisoes_citadas.docx

description: Listagem das decisões analisadas, com o referencial e link para acesso, bem como identificação à qual categoria resultado pertencem.
DOI: 10.48331/scielodata.ujnriu/xjlby2
title: Readme-20250729.txt
DOI: 10.48331/scielodata.ujnriu
title: Dados de replicação para: Lesbianidades em contextos de violência nas decisões do Superior Tribunal de Justiça

description: O artigo é uma síntese de uma pesquisa de mestrado cujo objetivo geral foi analisar, tendo por base os estudos de gênero, como lésbicas e/ou lesbianidades aparecem em decisões do STJ, a fim de compreender como essas identidades são (re)produzidas juridicamente. A pesquisa respondeu à seguinte pergunta: de que maneira lésbicas ou lesbianidades aparecem em decisões judiciais do STJ que envolvem lésbicas como autoras e/ou vítimas ou em contexto de violência?
Como referencial teórico, adotou-se a crítica lesbofeminista, com ênfase na cisheteronormatividade no Direito e no sistema de justiça. A metodologia utilizada foi a análise de conteúdo, aplicada a 40 espelhos de acórdãos e decisões judiciais proferidas pelo STJ no período entre 2013 e 2023. O desenho da pesquisa foi qualitativo, com foco na interpretação das representações jurídicas das identidades lésbicas. A coleta de dados ocorreu entre abril de 2022 e julho de 2023.
Ao final da análise, foram identificadas oito categorias: a) naturalização da lesbofobia familiar, b) falocentrismo, c) heterossexualidade como parâmetro, d) apagamento identitário lésbico, e) identidade lésbica como xingamento, f) lésbicas como grupo minorizado, g) adjetivação criminalizante, h) sapatão como cognome no tráfico de drogas. Os resultados revelam uma compreensão das lesbianidades brasileiras em contextos de violência, destacando diferentes significados atribuídos às lesbianidades em situações que envolvem relações familiares, dinâmicas geracionais e criminalidade.
description: A coleta de dados ocorreu entre abril de 2022 e julho de 2023.
DOI: 10.15468/dl.gv3cet
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tongeia hainani",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 133 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019801-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34810/data1913
title: Replication Data for: Nonlinear Optical Spectroscopy of Molecular Assemblies: What Is Gained and Lost in Action Detection?

description: Simulation of data are generated following instructions in https://doi.org/10.1063/1.4737843
description: Python, null
DOI: 10.15468/dl.7v2acg
title: Occurrence Download

description: A dataset containing 1187403 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Luscinia megarhynchos"
 ]
}

 The dataset includes 1187403 records from 3977 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019740-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4cvurf
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Holodiscus argenteus (L.fil.) Maxim.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017537-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28255021
title: Understanding factors that affect dislodgeable foliar residues of pyrimethanil and their dissipation: How relevant is the crop-type for human exposure?

description: Pesticide dislodgeable foliar residues (DFR) and their dissipation half-time (DT<sub>50</sub>) after application are important parameters for exposure and risk assessment from intended reentry activities or unintended dermal contact with treated crops. To understand the impact of agronomic factors on residue level a statistical based evaluation was conducted using ten DFR studies, with pyrimethanil applied in Scala<sup>®</sup> to strawberries, raspberries, peppers, apples, and grapes, 30 trials in total. Influences on initial DFR (DFR0) and DT<sub>50</sub> were investigated by multivariate linear regression analysis. The application rate and the crop itself indicate a potential influence on DFR0 when related to ground area applied which is not notable for three dimensional crops regardless of indoor/outdoor cultivation, when related to leaf wall area (LWA). DFR0 values for pyrimethanil do not depend on the number of applications as the range of DT<sub>50</sub> values determined for pyrimethanil is consistently small (0.3–2.3 days). All DT<sub>50</sub> are significantly lower than the European default (30 days). The noted difference in DT50 of peppers to strawberries is likely attributable to indoor cultivation. A proposal is made how to refine the exposure assessment of pyrimethanil making use of the available DFR0 and DT<sub>50</sub> data for other crop types.