cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/r6t9tmzzmz.2
title: KAMC_COVID-19

description: We retrospectively collected data of admitted confirmed COVID-19 patients (positive RT-PCR test) to King Abdulaziz Medical City in Riyadh. Starting from the first case, which was on April 2, 2020, till June 18, 2020. We retrieved 5,739 patients records from the EHR system. However,  1513 COVID-19 patients passed the criteria set to be included for mortality endpoint, and 1508 patients passed the inclusion criteria for the ventilatory support requirement endpoint. For ventilatory support requirement, any patient that is lacking one of the following are excluded: 1) confirmed RT-PCR for COVID-19, 2) age >18, 3) CXR, 4) CBC test results, 5) availability of medical history, and 6) Full code status at the time of COVID-19 diagnosis. For mortality inclusion criteria is same as ventilatory support endpoint except that COVID-19 patients who are assigned no-code before the SARS-CoV-2 test are also included. The data include the 36 variables and we below describe how it is obtained and:
1) Gender
2) Age at diagnosis
3) Ventilation support status
4) Vital status
5) Haematocrit
6) Hemoglobin
7) MCHC
8) MCH
9) MCV
10) MPV
11) RBC
12) Platelet_count
13) RDW
14) WBC: 
15) CXR zone 1
16) CXR zone 2
17) CXR zone 3
18) CXR zone 4
19) CXR zone 5
20) CXR zone 6
21) CXR zone 7
22) CXR zone 8
23) CXR zone 9
24) CXR zone 10
25) CXR zone 11
26) CXR zone 12
27) cancer_ICD-10_C00-C97
28) chronic_ischaemic_heart_disease_coronary_artery_disease_ICD-10_I25_I250-I259
29) hypertension_ICD-10_I10
30) asthma_ICD-10_J45_J450-J459
31) chronic_obstructive_pulmonary_disease_ICD-10_J44_J440-J449
32) type_2_diabetes_mellitus_ICD-10_E11
33) liver_cirrhosis_ICD-10_K74_K740-K746
34) chronic_viral_hepatitis_B_ICD-10_B181
35) chronic_viral_hepatitis_C_ICD-10_B182
36) chronic_kidney_disease_all_stages_ICD-10N18_N181-N189

Variable 1 is obtained from EHR. Variable 2 obtained from the EHR system as date of birth and converted to age using Covid-19 test date. Variable 3 is filled manually by a physician from the Infectious Disease Department at KAMC, the value MV assigned for mechanical ventilation, NIV for noninvasive ventilation. MV label is assigned if the patient received MV within 30 days of diagnosis. Variable 4:  Filled manually by looking at EHR system discharge charts. If the patient is not discharge after 30 days of follow-up and the patient is still alive. The vital status is then reported as Alive. Variables 5-14 are obtained from CBC test results  (within 3 days of DX). Variables 15-26, are annotated for CXR severity by four radiologists at KAMC.  The images are baseline (within 3 days of DX). The radiologist are blinded to the outcome (mortality, or ventilator support requirement). A value of 0 is assigned for no presence of ground glass opacity (GGO) , a value of 1 for moderate GGO, and a value of 2 for severe manifestation of GGO (see included CXR figure for CXR zones). Variables 27-36 are obtained from the EHR system a value of 0 for disease absence and 1 for disease presence.
DOI: 10.6084/m9.figshare.16869517.v1
title: Data

description: Strauss, L. I., Peterson, M. S., Kidd, J. K., Choe, J., Lauritzen, H. C., Patterson, A. B., ... & Pasnak, R. (2020). Evaluation of patterning instruction for kindergartners. <i>The Journal of Educational Research</i>, <i>113</i>(4), 292-302.
DOI: 10.6084/m9.figshare.16869517
title: Data

description: Strauss, L. I., Peterson, M. S., Kidd, J. K., Choe, J., Lauritzen, H. C., Patterson, A. B., ... & Pasnak, R. (2020). Evaluation of patterning instruction for kindergartners. <i>The Journal of Educational Research</i>, <i>113</i>(4), 292-302.
DOI: 10.6084/m9.figshare.16869515.v1
title: Overview of content from the MOOC "The Place of Music in 21st Century Education"

description: This table shows an Overview of content from the MOOC "The Place of Music in 21st Century Education". This overview helps inform qualitative and quantitative analyses of participant data in a number of resulting studies.
DOI: 10.5281/zenodo.5598295
title: Data set for paper on Australian fur seal prey capture and foraging efficiency

description: Data set for paper on Australian fur seal prey capture and foraging efficiency
DOI: 10.5281/zenodo.5157624
title: Data set for paper on Australian fur seal prey capture and foraging efficiency

description: Data set for paper on Australian fur seal prey capture and foraging efficiency
DOI: 10.3886/e121922v1-99780
title: Data and Code for: Social Media, News Consumption, and Polarization: Evidence from a Field Experiment

description: Does the consumption of ideologically congruent news on social media exacerbate polarization? I estimate the effects of social media news exposure by conducting a large field experiment randomly offering participants subscriptions to conservative or liberal news outlets on Facebook. I collect data on the causal chain of media effects: subscriptions to outlets, exposure to news on Facebook, visits to online news sites, and sharing of posts, as well as changes in political opinions and attitudes. Four main findings emerge. First, random variation in exposure to news on social media substantially affects the slant of news sites individuals visit. Second, exposure to counter-attitudinal news decreases negative attitudes toward the opposing political party. Third, in contrast to the effect on attitudes, I find no evidence that the political leanings of news outlets affect political opinions. Fourth, Facebook's algorithm is less likely to supply individuals with posts from counter-attitudinal outlets, conditional on individuals subscribing to them. Together, the results suggest that social media algorithms may limit exposure to counter-attitudinal news and thus increase polarization.<br>
DOI: 10.6084/m9.figshare.16867114
title: EMDS-7 Dataset

description: The Environmental Microorganism Image Dataset Seventh Version (EMDS-7) is a microscopic image data set, including the original Environmental Microorganism images (EMs) and the corresponding object labeling fifiles in ".XML" format fifile. The EMDS-7 data set consists of 41 types of EMs, which has a total of 2365 images and 13216 labeled objects.
DOI: 10.6084/m9.figshare.16869553
title: PLANEJAMENTO E IMPLANTAÇÃO DE UM SISTEMA DE ARQUIVOS NA EMPRESA EXPRESSO SÃO PEDRO LTDA

description: Relatório de estágio desenvolvido no ano de 2005 como requisito para a conclusão da Graduação em Arquivologia na Universidade Federal de Santa Maria.
DOI: 10.6084/m9.figshare.16869553.v1
title: PLANEJAMENTO E IMPLANTAÇÃO DE UM SISTEMA DE ARQUIVOS NA EMPRESA EXPRESSO SÃO PEDRO LTDA

description: Relatório de estágio desenvolvido no ano de 2005 como requisito para a conclusão da Graduação em Arquivologia na Universidade Federal de Santa Maria.
DOI: 10.5281/zenodo.5598304
title: PKPD data for early childhood DP optimization

description: Clinical and PK data used to develop PKPD models for optimial DP regimens for early childhood.
DOI: 10.5281/zenodo.5598303
title: PKPD data for early childhood DP optimization

description: Clinical and PK data used to develop PKPD models for optimial DP regimens for early childhood.
DOI: 10.25919/m8gv-fc35
title: Parkes observations for project P1129 semester 2021OCTS_01

description: PSR J0837-2454 is a young, high-Galactic-latitude pulsar, whose distance derived from dispersion measure (DM) implies a height of $&gt;$1~kpc above the Galactic plane. The young age (28kyr) and position can be explained if (i) the pulsar was born at this high Galactic $z$-height from a runaway or walkaway O/B star; or (ii) the DM-derived distance to this pulsar is incorrect and the pulsar is closer to the plane of the Galaxy. Obtaining a coherent timing solution for the pulsar over the coming year will allow gated VLBA observations which, along with an independent estimate of the proper motion, will also provide us with a distance to the pulsar through a measurement of the parallax, if the pulsar is closer than the DM implies. These measurements are crucial to determining whether or not this pulsar represents the remnants of a rare Milky Way halo O/B star. In addition, studying the scattering and scintillation will allow us to test whether there is any additional source of DM along the line of sight to the pulsar that might inflate its DM-derived distance, and hence its height above the Galactic plane. Finally, measuring the polarisation properties of the pulsar will allow us to study its beam geometry, as well as further investigate the ISM and the Galactic magnetic field in this direction.
DOI: 10.6084/m9.figshare.16869593
title: gnomAD SNP variant counts

description: This dataset contains variant counts at the resolution of individual amino acid positions as annotated by the gnomAD project. This file is required for running the COSMIS method.
DOI: 10.6084/m9.figshare.16869593.v1
title: gnomAD SNP variant counts

description: This dataset contains variant counts at the resolution of individual amino acid positions as annotated by the gnomAD project. This file is required for running the COSMIS method.
DOI: 10.6084/m9.figshare.16869603.v1
title: UniProt to Ensembl ID mapping

description: A mapping from UniProt protein IDs to Ensembl stable transcript IDs for running COSMIS.
DOI: 10.6084/m9.figshare.16609054
title: Klebsiella genome-scale metabolic models isolated from Grey-headed flying foxes

description: This data is associated with the manuscript entitled: <i>Transmission of Klebsiella strains and plasmids within and between Grey-headed flying fox colonies</i><br>This 7zip file contains:1) Scripts used to construct figures and perform analysis2) Genbank files with annotations matching:3) Genome-scale metabolic models of corresponding genomes in .json format. 4) MEMOTE reports of model files
DOI: 10.6084/m9.figshare.16609054.v2
title: Klebsiella genome-scale metabolic models isolated from Grey-headed flying foxes

description: This data is associated with the manuscript entitled: <i>Transmission of Klebsiella strains and plasmids within and between Grey-headed flying fox colonies</i><br>This 7zip file contains:1) Scripts used to construct figures and perform analysis2) Genbank files with annotations matching:3) Genome-scale metabolic models of corresponding genomes in .json format.
DOI: 10.5281/zenodo.5598359
title: Datos bibliográficos de publicaciones científicas de las áreas anexas a la ciencia de datos

description: Este dataset contiene datos bibliográficos de publicaciones científicas de las áreas anexas a la ciencia de datos recabados por medio de web scraping a la API de la página Semantic Scholar.
DOI: 10.6084/m9.figshare.16869603
title: UniProt to Ensembl ID mapping

description: A mapping from UniProt protein IDs to Ensembl stable transcript IDs for running COSMIS.
DOI: 10.25934/pr00006635
title: Efficacy and safety of anticoagulants for the treatment of acute venous thromboembolism (VTE) in patients with hematologic malignancies: a systematic review and individual patient level data meta-analysis

description: Background
Venous thromboembolism (VTE) is a major cause of morbidity and mortality in patients with cancer. Although the relative risk of VTE in cancer patients is up to 50-fold higher than in patients without cancer, the absolute risk varies depending on the subtype of cancer and the cancer treatment, and patient-related factors. The risks of VTE recurrence and bleeding during antithrombotic treatment (also called "blood thinners", medications that help treat blood clots) for cancer-associated VTE are also higher than in non-cancer patients but vary with each cancer subtype. 
Patients with hematologic malignancies, cancers that arise from blood cells like lymphoma or leukemia, represent a diverse group with different thrombosis and bleeding risks. They are typically underrepresented in the few randomized controlled trials evaluating anticoagulant therapy in cancer patients. Consequently, management of blood clots in patients with blood cancers (hematologic malignancy) is typically extrapolated from results based largely on patients with solid tumors, but these populations have many differences including hospitalization rates, risk of infection, use of indwelling catheters, multi-drug treatments with potentially critical drug-drug interactions, and higher likelihood of severe cytopenias that may complicate blood clot management.  
The restricted inclusion of hematologic malignancies in thrombosis treatment studies has led to a knowledge deficit regarding anticoagulant safety and efficacy, and thus, optimum management for these patients remains unknown.  More precise risk estimates regarding efficacy and safety of anticoagulant modalities in patients with hematologic malignancies may provide valuable information to clinicians that have critical impact on patient outcomes. A systematic review with individual patient-level meta-analysis on treatment of acute VTE in patients with hematologic malignancies can help narrow this knowledge gap.
DOI: 10.5281/zenodo.5598368
title: Amis-Chinese CS

description: This is the SPSS entry of an Amis-Chinese code mixing study.
DOI: 10.5281/zenodo.5598367
title: Amis-Chinese CS

description: This is the SPSS entry of an Amis-Chinese code mixing study.
DOI: 10.6084/m9.figshare.16869657
title: Full model validation.sav

description: 850 participants
DOI: 10.6084/m9.figshare.16869657.v1
title: Full model validation.sav

description: 850 participants
DOI: 10.25919/vtxr-jg59
title: Parkes observations for project P1050 semester 2021OCTS_01

description: This is a request for observing time for the timing campaign of new pulsar discoveries from the reprocessing of the low-latitude Galactic plane section of the HTRU survey (P630). We have now completed 90 % of the survey with GPU based coherent acceleration search, template bank and fast folding algorithm pipelines, and now have discovered 92 previously unknown pulsars and 8 "class A" pulsars awaiting confirmation. Interesting science can usually only be derived from a new pulsar after confirmation and a follow-up timing campaign is carried out. One year of initial timing is the minimum timespan required to fully characterise any newly-discovered pulsars, essential for deriving pulsar parameters such as the characteristic age, magnetic field strength, spin-down rate, as well as to detect any unexpected behaviour of the pulsar which might result from emission instabilities. Pulsars on the observing list here have been confirmed in the previous and current 2021APRS semesters, the follow-up timing in OCTS2021 will produce completely new and exciting results. In addition, this timing project will allow us to measure the true Galactic plane pulsar population and the boundaries of pulsar parameter space in the galactic plane.
DOI: 10.5281/zenodo.5598390
title: Global soil moisture storage capacity at 0.5° resolution for geoscientific modelling

description: Soil moisture storage capacity (SMSC) links the atmosphere and terrestrial ecosystems, which is required as spatial parameters for geoscientific models, but there are currently no available parameter datasets of SMSC on a global scale especially for hydrological models. Here, we produce a dataset of SMSC parameter for global hydrological models. Parameter calibration of three commonly used monthly water balance models provides the labels for the deep residual network. Calibration on the global grids can significantly reduce parameter discontinuities compared to calibration on individual catchments. The global SMSC is reconstructed at 0.5° resolution by integrating 15 types of meteorological, topographic, and runoff data based on a deep residual network. SMSC products are validated with spatial distribution against root zone depth datasets and validated in terms of simulation efficiency on global grids and 20 catchments from different climatic regions, respectively. We provide the global SMSC parameter dataset as a benchmark for geoscientific modelling by users.
DOI: 10.5281/zenodo.5563132
title: Scale dependent spatial structuring of mountain river large bed elements maximizes flow resistance - Data

description: Datasets and R code related to manuscript entitled, "Scale dependent spatial structuring of mountain river large bed elements maximizes flow resistance". See '0_READ_ME.rtf' file for additional description of available files.
DOI: 10.5281/zenodo.5563131
title: Scale dependent spatial structuring of mountain river large bed elements maximizes flow resistance - Data

description: Datasets and R code related to manuscript entitled, "Scale dependent spatial structuring of mountain river large bed elements maximizes flow resistance". See '0_READ_ME.rtf' file for additional description of available files.
DOI: 10.5281/zenodo.5598389
title: Interpolated Climatology -- CBIOMES-global (alpha version) -- surface variables

description: <pre>**CBIOMES-global (alpha version):** CBIOMES-global (alpha version) is a global ocean state estimate that covers the period from 1992 to 2011. It is based on Forget et al 2015 for ocean physics [MIT general circulation model](https://mitgcm.readthedocs.io/en/latest/index.html) and on Dutkiewicz et al 2015 for marine biogeochemistry and ecosystems [Darwin Project model](https://darwin3.readthedocs.io/en/latest/phys_pkgs/darwin.html). **References:** Forget, G., J.-M. Campin, P. Heimbach, C. N. Hill, R. M. Ponte, and C. Wunsch, 2015: ECCO version 4: an integrated framework for non-linear inverse modeling and global ocean state estimation. Geoscientific Model Development, 8, 3071-3104, &lt;http://dx.doi.org/10.5194/gmd-8-3071-2015&gt; or [this URL](http://www.geosci-model-dev.net/8/3071/2015/) Dutkiewicz, S., A.E. Hickman, O. Jahn, W.W. Gregg, C.B. Mouw, and M.J. Follows, 2015: Capturing optically important constituents and properties in a marine biogeochemical and ecosystem model. Biogeoscience, 12, 4447-4481, &lt;http://dx.doi.org/10.5194/bg-12-4447-2015&gt; or [this URL](https://www.biogeosciences.net/12/4447/2015/)</pre>
DOI: 10.5281/zenodo.5598402
title: Global soil moisture storage capacity at 0.5° resolution for geoscientific modelling

description: Soil moisture storage capacity (SMSC) links the atmosphere and terrestrial ecosystems, which is required as spatial parameters for geoscientific models, but there are currently no available parameter datasets of SMSC on a global scale especially for hydrological models. Here, we produce a dataset of SMSC parameter for global hydrological models. Parameter calibration of three commonly used monthly water balance models provides the labels for the deep residual network. Calibration on the global grids can significantly reduce parameter discontinuities compared to calibration on individual catchments. The global SMSC is reconstructed at 0.5° resolution by integrating 15 types of meteorological, topographic, and runoff data based on a deep residual network. SMSC products are validated with spatial distribution against root zone depth datasets and validated in terms of simulation efficiency on global grids and 20 catchments from different climatic regions, respectively. We provide the global SMSC parameter dataset as a benchmark for geoscientific modelling by users.
DOI: 10.6084/m9.figshare.16528557.v2
title: Potentially long-lasting effects of the pandemic on scientists

description: Code and demo data for the paper "Potentially long-lasting effects of the pandemic on scientists".<br>
DOI: 10.6084/m9.figshare.16528557.v1
title: Fewer new projects: Potentially long-lasting effects of the pandemic on scientists

description: Code and demo data for the paper "Fewer new projects: Potentially long-lasting effects of the pandemic on scientists".<br>
DOI: 10.5281/zenodo.5598417
title: Interpolated Climatology -- CBIOMES-global (alpha version) -- surface variables

description: <pre>**CBIOMES-global (alpha version):** CBIOMES-global (alpha version) is a global ocean state estimate that covers the period from 1992 to 2011. It is based on Forget et al 2015 for ocean physics [MIT general circulation model](https://mitgcm.readthedocs.io/en/latest/index.html) and on Dutkiewicz et al 2015 for marine biogeochemistry and ecosystems [Darwin Project model](https://darwin3.readthedocs.io/en/latest/phys_pkgs/darwin.html). **References:** Forget, G., J.-M. Campin, P. Heimbach, C. N. Hill, R. M. Ponte, and C. Wunsch, 2015: ECCO version 4: an integrated framework for non-linear inverse modeling and global ocean state estimation. Geoscientific Model Development, 8, 3071-3104, &lt;http://dx.doi.org/10.5194/gmd-8-3071-2015&gt; or [this URL](http://www.geosci-model-dev.net/8/3071/2015/) Dutkiewicz, S., A.E. Hickman, O. Jahn, W.W. Gregg, C.B. Mouw, and M.J. Follows, 2015: Capturing optically important constituents and properties in a marine biogeochemical and ecosystem model. Biogeoscience, 12, 4447-4481, &lt;http://dx.doi.org/10.5194/bg-12-4447-2015&gt; or [this URL](https://www.biogeosciences.net/12/4447/2015/)</pre>
DOI: 10.5281/zenodo.5598388
title: Interpolated Climatology -- CBIOMES-global (alpha version) -- surface variables

description: <pre>**CBIOMES-global (alpha version):** CBIOMES-global (alpha version) is a global ocean state estimate that covers the period from 1992 to 2011. It is based on Forget et al 2015 for ocean physics [MIT general circulation model](https://mitgcm.readthedocs.io/en/latest/index.html) and on Dutkiewicz et al 2015 for marine biogeochemistry and ecosystems [Darwin Project model](https://darwin3.readthedocs.io/en/latest/phys_pkgs/darwin.html). **References:** Forget, G., J.-M. Campin, P. Heimbach, C. N. Hill, R. M. Ponte, and C. Wunsch, 2015: ECCO version 4: an integrated framework for non-linear inverse modeling and global ocean state estimation. Geoscientific Model Development, 8, 3071-3104, &lt;http://dx.doi.org/10.5194/gmd-8-3071-2015&gt; or [this URL](http://www.geosci-model-dev.net/8/3071/2015/) Dutkiewicz, S., A.E. Hickman, O. Jahn, W.W. Gregg, C.B. Mouw, and M.J. Follows, 2015: Capturing optically important constituents and properties in a marine biogeochemical and ecosystem model. Biogeoscience, 12, 4447-4481, &lt;http://dx.doi.org/10.5194/bg-12-4447-2015&gt; or [this URL](https://www.biogeosciences.net/12/4447/2015/)</pre>
DOI: 10.6084/m9.figshare.14291069
title: Ocimum bacilicum (Kemangi) Intervention on powder and microencapsulated Spirulina platensis and its Bioactive Molecules

description: The following data are the results of the analysis of Ocimum bacilicum intervention on Spirulina platensis against bioactive compounds
DOI: 10.6084/m9.figshare.16869696.v1
title: Additional file 3 of Developing Chenopodium ficifolium as a potential B genome diploid model system for genetic characterization and improvement of allotetraploid quinoa (Chenopodium quinoa)

description: Additional file 3: Table S1-C: Evaluation of flowering time difference between Portsmouth and Quebec accessions. Table S2. Goodness of fit tests. Chi-Square Goodness of fit tests for segregation of FTL1 genotypes, A1A1, A1A2, and A2A2 among the F2 populations of 1st and 2nd experiment. The table also shows the results for the Chi-Square homogeneity tests on the F2 populations of the two experiments. Table S3. BLASTn result of all FTL amplicons to the Cq_PI614886_V1 chromosome assembly of quinoa. Table S4. T-tests. T-Test (Independent sample with unequal variance) results for comparison between P and QC accessions for flowering time, plant height, number of branches, branch angle, and internode length in the two experiments. The mean (de-transformed), df, t-ratio, and the p-value of each test is included. Table S5. Multivariate correlation analysis of traits phenotyped in 1st and 2nd experiments. Table S6. Pairwise t-tests on FTL1 genotypes of 1st and 2nd experiments. Table S7. Unique SNPs identified in C. ficifolium accessions, Portsmouth and Quebec, in reference to FTL1 gene in B-subgenome of quinoa.