cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/24h-0a2-8yq
title: Microbioerosional trace fossils

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x8n-2at-nn3
title: Coprulus oblongus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qff-sxw-en4
title: Homostius sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zy2-kll-mz2
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mn4-qpa-k88
title: Homostius sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12624974.v2
title: Mentorship Programme Study Transcripts.pdf

description: Transcripts from in-depth interviews
DOI: 10.6084/m9.figshare.27021841.v1
title: adata_pancrease_nosplicevelo.h5ad

description: Anndata object containing the processed scRNA-seq data for the mouse pancreas case study in the manuscript Mahajan, Tarun, and Sergei Maslov. "noSpliceVelo infers gene expression dynamics without separating unspliced and spliced transcripts." bioRxiv (2024): 2024-08.
DOI: 10.17632/k2h4pw9gfn
title: Dataset for the manuscript Multi-objective optimization for simultaneously designing active control of tower vibrations and power control in wind turbines

description: This dataset contains data and plots presented in the paper "Multi-objective optimization for simultaneously designing active control of tower vibrations and power control in wind turbines".
The dataset encompasses a wide variety of data types, including but not limited to:
- Numerical data: Post-processed simulation data and calculations.
- Visual data: plots illustrating findings.

These data are provided in two folders. The description of these folder and their files is as follows:

A) The folder "OptimizationResults" includes:
- the dataset ParetoFrontsPoints.mat with the 50 points of the Pareto front obtained by optimization for the different control schemes: Control1 CPC, Control2 CPC+Fore, Control3 CPC+Side, and Control4 Full
 the dataset MCDMoptimalDesigns.mat with the optimal solutions [ISE,CVR,STD] selected from the Pareto fronts by using the MCDM: SAW, TOPSIS, VICKOR, and the average of them.
- the file codeParetofigures.m generate the figures 5 and 6 in the paper about the 3D Pareto fronts and their 2D projections.
- Figure files in the MATLAB format .fig for Figures 5 and 6 in the manuscript.
- the file Spider3.xlsx with the normalized spider diagram in the CPC solution for optimized objectives of Figure 7 in the paper.

B) The folders "SimulationResults" includes:
- tha datset SimulationData.mat with the simulation data obtained with each optimal control scheme; order: CPC TFC AGTC Full
- Files codeSimulationfigures.m, which is used to treat and generate the data for Tables 3 and 4 and figures from 8 to 12 in the manuscript
- Functions f_CVR.m, f_ISE.m, and f_espectroFFT.m, which are used in the previous file to calculate the CVR index, the ISE, and the FFT of signals, respectively.
- Figure files in the MATLAB format .fig for Figures 8 to 11 in the manuscript.
- the file Spider_Otherdata.xlsx with the normalized spider diagram in the CPC solution for different performance indices of Figure 13 in the paper.
DOI: 10.3535/65c-zw7-m2x
title: Schizosteus sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vjv-9rp-vp0
title: Schizosteus sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5en-yc9-y4e
title: Schizosteus sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tga-cv7-c67
title: Schizosteus sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26325841.v1
title: UncertaintyAwareSlumMapping

description: Dataset for the repository stark-t/UncertaintyAwareSlumMapping (github.com)
DOI: 10.6084/m9.figshare.27110770.v1
title: Output4.spv

description: Survival after radical cystectomy in sardjito general hospital
DOI: 10.6084/m9.figshare.852971.v1
title: Lipid hydrolysis by raclopride tartrate

description: HPLC data showing the rates of lipid ester hydrolysis by a zwitterionic D2 antagonic, raclopride tartrate. Data is expressed as the molar percentage of lyso-lipid in the sample at the time of quenching (by freeze-drying of aliquot): fatty acid signal was not easily quantifiable. However, linear increase of lyso-lipid signal meant fatty acid concentration could be assumed to be equal. System was deliberately chosen to deliver slow rates to make observation, sampling and quantitative analysis possible. This was generated as a follow-up to the original discovery, available at http://www.ncbi.nlm.nih.gov/pubmed/16973478.
DOI: 10.17632/p9rkcyd3cz
title: Assessing gait asymmetry in patient with stroke by a smartphone

description: This research data is is currently unpublished material entitled "Assessing gait asymmetry in patient suffering stroke with lower limb angles using sagittal plane images captured by a smartphone".
DOI: 10.3535/6br-vqc-rz9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tr0-fmk-9bg
title: Eriophyllum Lag.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tb6-8sd-pyt
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vtd-mfl-zrc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26042860.v1
title: dataset.csv

description: The dataset contains comprehensive health and demographic information for various counties over several years. It includes the county name and the year the data was recorded, along with the total population for each county. Health-related data points include the number of people consuming fruits and vegetables, those engaging in physical activity, and those not participating in any physical activity. The dataset also records the average levels of atrazine, a common herbicide, in each county.In addition, it provides the number of people diagnosed with diabetes, those classified as obese based on their BMI, and those classified as overweight. Demographic details cover the population numbers for different racial groups, including White, Black or African American, American Indian or Alaska Native, Asian, and Native Hawaiian or Other Pacific Islander.Economic indicators are also included, such as the median income of each county. Educational attainment is detailed with the number of individuals having less than a high school education, those who graduated from high school, those with some college education or an associate degree, and those holding a bachelor's degree. This dataset offers a robust foundation for analyzing health trends, environmental impacts, and demographic changes across different counties.
DOI: 10.17632/9cfxtx5fx5
title: dataset of A Critical Role of Lung Megakaryocytes in House Dust Mite-induced Asthmatic Inflammation and Remodeling

description: raw date of the paper
DOI: 10.3535/624-w16-pah
title: Eriophyllum Lag.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vpc-msc-v0h
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14254439.v1
title: data.xlsx

description: Data for Nano-scale Wetting Film Impact on Multiphase Transport Properties in Porous Media
DOI: 10.17632/h3p7zy5vkt
title: Replication package for Modeling the Macroeconomic Consequences of Natural Disasters: Capital Stock, Recovery Dynamics, and Monetary Policy

description: Replication package for Modeling the Macroeconomic Consequences of Natural Disasters: Capital Stock, Recovery Dynamics, and Monetary Policy (Eviews and R)
DOI: 10.3535/fze-t86-4b3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.6133754.v3
title: PDB files used in the system preparation, AMBER topologies and coordinates and force field parameters for non-standard residues: The Influence of Chemical Change on Protein Dynamics: A Case Study with Pyruvate Formate-Lyase

description: We provide AMBER topology (parm7) and coordinate files (pdb and rst7) for PFL systems before and after the first half-reaction together with library and frcmod files (lib and frcmod) for non-standard residues (bonded and non-bonded force field parameters).<br><br>mPFL - monomeric PFL system before the first half-reaction (radical on C418)<br>dPFL - dimeric PFL system before the first half-reaction (radical on C418)<br>mAcPFLI - monomeric PFL system after the first half-reaction (radical on formyl)<br>dAcPFLI - dimeric PFL system after the first-half reaction (radical on formyl)<br>mAcPFLII - monomeric PFL system after the first half-reaction (radical on C419)<br>dAcPFLII - dimeric PFL system after the first half-reaction (radical on C419)<br>PYR - pyruvate<br>FOR - CO<sub>2</sub><sup>-</sup> radical<br>FOH - formate<br>CYR - cysteinyl radical<br>CYA - S-acetyl-cysteine<br><br>Electrostatic potentials were derived from the IEF-PCM B3LYP/cc-pVTZ//HF/6-31G(d,p) calculationsm while the atomic partial charges were developed using RESP procedure.<br>
DOI: 10.6084/m9.figshare.9725675.v1
title: Data_memory for fiction

description: Exploration of relationship between memory recall and fantasy understanding
DOI: 10.26180/21482841.v1
title: Dataset for Gravitational Pivoting

description: A set of CSV files containing the real-world collected data and ground truth dataset.
DOI: 10.3535/4q3-3zd-fjg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cep-t8l-0bf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gl9-kpx-dqx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vfh-eyk-5re
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1j3-3fl-cwd
title: Aragonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d40-94s-xfn
title: Pyrite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.17085983.v1
title: SM1. Selected Data from the Holocene marine deposits of the Canary Islands, Spain.

description: This data set contains a selection of reliable data from the main Holocene marine sites of paleontological and paleoclimatic interest from the Canary Islands, Spain. There are three sections: (1) Topographical Location of the selected sites, in terms of UTM coordinates and heights (m), above the present medium sea level (a.p.s.l.); (2) Geology and Radiocarbon ages, including a short geological description of the marine deposits and their conventional and calibrated ages; (3) paleontology and paleoclimate, with a summary of the main fossil fauna, species and/or subspecies, collected from the sites and properly classified in accordance with the systematic paleontology; and an interpretation of the paleoclimatic conditions at the time the fossils lived and were deposited. Moreover, when available, values of SST (Sea Surface Temperature) have been also calculated (or estimated). Each section is presented with their available scientific source(s).
DOI: 10.3535/20p-de5-pe7
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/aab-z1s-3xf
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bva-qfw-anc
title: Boracite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xq0-r9g-bwv
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/aez-l83-hjy
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r61-a6r-642
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1d6-sjx-f0y
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/44l-ezb-760
title: Aragonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14527017.v2
title: Purple Crowned Fairy Wren Telomere dynamics and lifespan

description: In our longitudinal study, we examined life-long telomere dynamics in wild purple crowned fairy wrens (<i>Malurus coronatus coronatus</i>) from early life (the time of near complete skeletal growth (age seven days)) and at various points thereafter (~ one to ten years of age). Purple crowned fairy wrens are cooperatively breeding birds that are highly philopatric with a maximum recorded lifespan of 14 years (Peters, unpublished data). We focus our work on the threatened, western sub-species that is restricted to riparian vegetation dominated by <i>Pandanus aquaticus</i> the tropical savannahs of far-north Western Australia. We utilised a high-quality, long-term dataset (&gt;15 years) including lifespan and complete life-history information for several cohorts. These data enabled us to examine the relationship between telomere length, rates of telomere shortening at different life stages and individual lifespan. Our approach involved a within-subject centering analyses (using delta and average age) that allowed us to simultaneously test the association of lifespan with telomere length and telomere dynamics.
DOI: 10.6084/m9.figshare.28169591.v1
title: signed distance field

description: Distance to walls within a two dimensional domain for a CFD model
DOI: 10.3535/7ba-fk7-sp3
title: Aragonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vk7-49d-s87
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e4z-lmm-dvz
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y2h-hy4-wbq
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28528403.v1
title: Reference Group

description: test how to use figshare
DOI: 10.6084/m9.figshare.28554317.v1
title: <b>Data from Dryland Cropping System Studies at the Northern Great Plains Research Laboratory, 2006-2009</b>

description: Dryland cropping systems in the northern Great Plains are challenged by erratic and limited water availability, persistent wind and water erosion, and reduced soil fertility. Long-term experiments evaluating novel innovations can provide insights to help producers overcome these challenges. Multiple studies were conducted to evaluate crop yield and soil properties in three cropping system treatments established in 1994 in central North Dakota USA. Cropping systems included spring wheat (<i>Triticum aestivum</i> L.) – fallow, continuous spring wheat, and spring wheat – safflower (<i>Carthamus tinctorius</i> L.) – rye (<i>Secale cereale</i> L.). Cropping systems were managed using no-tillage practices. Measurements of crop yield, soil properties and processes, and weather metrics were collected following established protocols from 2006 through 2009. Data may be used to investigate crop and soil responses to dryland cropping systems in a semiarid continental climate. Applicable USDA soil types include Temvik, Wilton, Grassna, Linton, Mandan, and Williams.
DOI: 10.3535/2z5-ptk-70j
title: Conularia sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yz1-zcw-zej
title: Magnetite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.4295126.v1
title: Cross-validation indices

description: Five-fold cross validation indices used in our paper<br>
DOI: 10.3535/8pf-des-vj3
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16553991.v4
title: Machine learning models

description: Machine learning<br>
DOI: 10.3535/74k-7gd-95g
title: Calcite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h6f-lm3-bxx
title: Saykrodichia sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/nm8fp8mcbn
title: Data for: Integrating genome-scale metabolic models into the prediction of microbial kinetics in natural environments

description: The goal of the MATLAB code is to simulateg the metabolism of Methanosarcina barkeri by linking COBRA toolbox with PHREEQC. COBRA toolbox specializes in the analysis of genome-scale metabolic models, and PHREEQC is a software package for simulating geochemical reactions. The two software tools are linked using Microsoft COM. The simulation is for a laboratory experiment that grew M. barkeri with acetate in laboratory reactors. At each time step, PHREEQC is applied to simulate chemical speciation in growth media, and the partition of gases between the liquid media and headspace of the reactors. The output includes the variations with time in the concentrations of chemical compounds and biomass. The MATLAB code is applied to simulate the laboratory experiments of Fukuzaki et al. (1990). They grew Methanosarcina barkeri at 37 oC in batch reactors of 50 mL of complex growth media and 75 mL headspace. The media had pH 7.1 and contained 19.7 mM acetate and 9.3 mM ammonium. We compare the simulation results to the acetate concentrations reported by Fukuzaki et al. (1990). A total of 5 files are required to simulate the laboratory experiments of Fukuzaki et al. (1990). Table 1 lists the four files coded by us. The simulation also requires a genome-scale metabolic model for M. barkeri, which we use the model developed by Gonnerman et al. (2013). This model with the name of M_barkeri_model can be downloaded from Gonnerman et al. (2013). MATLAB CODE File “iMG746_ac_CX_fukuzaki” have the following outline: Initial model parameters Load MATLAB resources Set model boundary conditions (including “RxnID”) Load iPHREEQC resources (including “RxnID” and “writePhreeqc_ac”) Setup data structures Save initial conditions Run simulation ‘for’ loop IPHREEQC speciation (including “writePhreeqc_ac”) Calculate FT value Run FBA on respiration network to predict respiration rate (including “RxnID”) Run FBA on biosynthesis network to predict growth rate (including “RxnID”) Integrate extracellular concentrations (including “RxnID”) Save new concentrations to data structure Start next loop Export data structure to file (including “RxnID”) Plot select model and experimental data (including “RxnID”, “Fukuzaki”) The execution of the files requires the installation of MATLAB (v. 2016b), COBRA Toolbox for MATLAB (v. 3.0), IPHREEQC and IPHREEQC COM (v. 3.4.0), and Gruobi Optimization Solver (v. 6.5.2).
DOI: 10.3535/67d-z9q-fpj
title: Calcite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6t2-xde-k9d
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27855354.v1
title: full_voles_trap.csv

description: Compiled live-trapping data collected 2019–2022 at the Miami University Ecology Research Center (ERC) in Oxford, Ohio (39° 53’N, 84° 73’W) in four outdoor, semi-natural enclosures. Includes date of trapping event; enclosure (population) being trapped; location of traps on a 5 m x 5 m grid (25 stakes A-Y; 3 traps per stake); PIT tag number of trapped animal; weight of trapped animal; sex of trapped animal; and event label.
DOI: 10.3535/gws-mmq-5yn
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l23-fl8-kcb
title: Brachyelasma sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x7t-yxa-g1w
title: †Holopea J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n23-3gc-r1k
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sz4-msf-w4f
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22229950.v1
title: Considerations For the Application of Priming Exercise in Elite Sport Qualitative Data Set

description: During semi-structured interviews, participants were invited to (i) share their opinions about how priming exercise may be prescribed to enhance sporting performance and (ii) offer considerations for implementing priming exercise in practical environments. Purposive sampling was used to identify 28 individuals currently working as practitioners in Australian elite sport. Participants were employed at State institutes of sport or professional sporting clubs and involved in the physical preparation of athletes representing 30 sports. Following university ethical approval, participants (<em>n </em>= 28) were contacted by a gatekeeper at Sport Australia to invite them to participate in a face-to-face interview. Individuals interested in participating in the study were provided with an information sheet that detailed the interview topic and discussed the ethical implications of their involvement. The individuals were then invited to ask questions about the research project and, following initial contact, asked to arrange a suitable time and location for an interview. Before the start of the interview process, ethical considerations (i.e., the use of pseudonyms, data confidentiality, and participants' right to withdraw) were provided to all participants. Participants were required to provide their written informed consent at this time. Thematic analysis revealed six organising themes relating to factors affecting the choice to implement priming exercise and how these considerations influenced prescription within competitive settings: (a) limited knowledge, (b) training age, (c) priming outcomes, (d) logistics, (e) buy-in, and (f) programming. The findings highlight that in addition to practitioners’ perceived limited knowledge of priming methods, contextual factors largely determined whether priming strategies were applied and, based on these considerations, how exercise stimuli were programmed to elicit a performance-enhancing effect. In addition to gaining insight into applied practices, the findings provide a framework for future investigations examining the acute effects of exercise stimuli on performance outcomes in sporting environments.
DOI: 10.3535/gld-35d-5en
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.