cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5q23r385
title: MassIVE Reanalysis RMSV000000396.8 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080848/PXD002214 [14 out of 21] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.48370/ofd/dwodqf
title: Microrhagus lepidus (Rosenhauer, 1847), C-596

description: Coleoptera collection
DOI: 10.25345/c5k93194d
title: MassIVE Reanalysis RMSV000000584.38 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000079514/PXD000561 [14 out of 41], Adrenal gland [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.6372688
title: Rostrhamus sociabilis SPAdes preassembly

description: .
DOI: 10.5281/zenodo.6372687
title: Rostrhamus sociabilis SPAdes preassembly

description: .
DOI: 10.25345/c5fj29g95
title: MassIVE Reanalysis RMSV000000435.3 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080815/PXD004655 [7 out of 9] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.6372825
title: Replication files for "Comparing Online and Offline Political Support".

description: The Zip-folder contains replication materials for the article "Comparing Online and Offline Political Support". The folder contains a readme with information and details on the replication data and scripts.
DOI: 10.5281/zenodo.6372820
title: Replication files for "Comparing Online and Offline Political Support".

description: The Zip-folder contains replication materials for the article "Comparing Online and Offline Political Support". The folder contains a readme with information and details on the replication data and scripts.
DOI: 10.25345/c59s1kp4j
title: MassIVE Reanalysis RMSV000000473.6 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000079830/PXD000815 [9 out of 17] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5610vw0q
title: MassIVE Reanalysis RMSV000000584.39 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000079514/PXD000561 Part 2 [80 out of 85], Heart [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c52805277
title: MassIVE Reanalysis RMSV000000372.3 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080782/PXD002601 [3 out of 4] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5xk84t63
title: MassIVE Reanalysis RMSV000000362.30 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000081607 Confetti, ArgC-LysC-Chymotrypsin CID [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5st7f13v
title: MassIVE Reanalysis RMSV000000398.6 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000086899 SubCellBarcode Scalable proteome-wide mapping of protein localization and relocalization [BioReplicate: Subcell_MVYB_H322Ctrl_QE1_20160518_TMT10_IPG3-10_7of15ul] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5p26q69d
title: MassIVE Reanalysis RMSV000000421.5 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080866/PXD001582 [11 out of 12] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5j960d45
title: MassIVE Reanalysis RMSV000000387.7 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080826/PXD003947 [1 out of 10] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5dj58k9x
title: MassIVE Reanalysis RMSV000000444.5 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080868/PXD003523 [10 out of 14] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c58s4js5s
title: MassIVE Reanalysis RMSV000000366.21 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000086387 A Quantitative Proteome Map of the Human Body, TMT10 MS3 [Mixture: 26] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5513v02v
title: MassIVE Reanalysis RMSV000000388.10 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080701/PXD000612 [12 out of 27] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c51c1tk0j
title: MassIVE Reanalysis RMSV000000381.2 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080849/PXD004977 [4 out of 4] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.48370/ofd/qyc1jd/mgmz98
title: Microrhagus emyi.jpg

description: :unav
DOI: 10.48370/ofd/qyc1jd
title: Microrhagus lepidus (Rosenhauer, 1847), C-597

description: Coleoptera collection
DOI: 10.25345/c5wm13x6d
title: MassIVE Reanalysis RMSV000000592.12 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000083508 29 tissues, testis Trypsin_HCD_QExactiveplus [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5rv0d42p
title: MassIVE Reanalysis RMSV000000584.40 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000079514/PXD000561 Part 2 [37 out of 85], Heart [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5n29p976
title: MassIVE Reanalysis RMSV000000373.5 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080827/PXD001856 [6 out of 10] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5h98zh2k
title: MassIVE Reanalysis RMSV000000396.9 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080848/PXD002214 [13 out of 21] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5cj87p86
title: MassIVE Reanalysis RMSV000000592.11 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000083508 29 tissues, liver Trypsin_HCD_QExactiveplus [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c57s7hw5j
title: MassIVE Reanalysis RMSV000000444.6 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080868/PXD003523 [8 out of 14] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5445hg4f
title: MassIVE Reanalysis RMSV000000435.4 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080815/PXD004655 [1 out of 9] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c50c4sp1s
title: MassIVE Reanalysis RMSV000000473.7 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000079830/PXD000815 [13 out of 17] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.6372789
title: Ficus trees with upregulated or downregulated defence did not impact predation on their neighbours in a tropical rainforest

description: Trees can emit volatile organic compounds (VOCs) when under attack by herbivores, and these signals can also be detected by natural enemies and neighbouring trees. There is still limited knowledge of intra- and inter-specific communication in diverse habitats. We studied the effects of induced VOC emissions by three <em>Ficus</em> species on predation on the focal <em>Ficus</em> trees in a lowland tropical rainforest in Papua New Guinea. Further we assessed predation across a phylogenetically diverse set of neighbouring tree species. Two of the focal tree species, <em>Ficus pachyrrhachis</em> and <em>F. hispidioides</em>, have strong alkaloid-based constitutive defences while the third one, <em>F. wassa</em>, is lower in constitutive chemical defences. We experimentally manipulated the jasmonic acid signalling pathway by spraying the focal individuals with either methyl jasmonate (MeJA) or diethyldithiocarbamic acid (DIECA). These treatments induce increases or decreases in VOC emissions, respectively. We tested the possible effects of VOC emissions on each focal <em>Ficus</em> tree and two of its neighbours by measuring the predation rate of plasticine caterpillars. We found that predation increased after the MeJA application in only one focal tree species, <em>F. wassa</em>, while the DIECA application had no effect on any of the three focal species. Further, we did not detect an effect of our treatments on predation rates across neighbouring trees. Neither the phylogenetic distance of the neighbouring tree from the focal tree nor the physical distance from the focal tree had any effect on predation rates for any of the three focal <em>Ficus</em> species. These results suggest that even congeneric tree species vary in their response to the MeJA and DIECA treatment and subsequent response to VOC emissions by predators. Our results also suggest that MeJA effects did not spill over to neighbouring trees in highly diverse tropical rainforest vegetation.
description: This research was funded by: Grant Agency of the Czech Republic (19-28126X) and German Research Foundation (DFG–FZT 118, 202548816)
DOI: 10.5281/zenodo.6372788
title: Ficus trees with upregulated or downregulated defence did not impact predation on their neighbours in a tropical rainforest

description: Trees can emit volatile organic compounds (VOCs) when under attack by herbivores, and these signals can also be detected by natural enemies and neighbouring trees. There is still limited knowledge of intra- and inter-specific communication in diverse habitats. We studied the effects of induced VOC emissions by three <em>Ficus</em> species on predation on the focal <em>Ficus</em> trees in a lowland tropical rainforest in Papua New Guinea. Further we assessed predation across a phylogenetically diverse set of neighbouring tree species. Two of the focal tree species, <em>Ficus pachyrrhachis</em> and <em>F. hispidioides</em>, have strong alkaloid-based constitutive defences while the third one, <em>F. wassa</em>, is lower in constitutive chemical defences. We experimentally manipulated the jasmonic acid signalling pathway by spraying the focal individuals with either methyl jasmonate (MeJA) or diethyldithiocarbamic acid (DIECA). These treatments induce increases or decreases in VOC emissions, respectively. We tested the possible effects of VOC emissions on each focal <em>Ficus</em> tree and two of its neighbours by measuring the predation rate of plasticine caterpillars. We found that predation increased after the MeJA application in only one focal tree species, <em>F. wassa</em>, while the DIECA application had no effect on any of the three focal species. Further, we did not detect an effect of our treatments on predation rates across neighbouring trees. Neither the phylogenetic distance of the neighbouring tree from the focal tree nor the physical distance from the focal tree had any effect on predation rates for any of the three focal <em>Ficus</em> species. These results suggest that even congeneric tree species vary in their response to the MeJA and DIECA treatment and subsequent response to VOC emissions by predators. Our results also suggest that MeJA effects did not spill over to neighbouring trees in highly diverse tropical rainforest vegetation.
description: This research was funded by: Grant Agency of the Czech Republic (19-28126X) and German Research Foundation (DFG–FZT 118, 202548816)
DOI: 10.25345/c5qv3c70g
title: MassIVE MSV000089086 - lipidome and proteome profiling of scorpion venom
title: Mass spectrometry-based lipidome and proteome profiling of Hottentotta saulcyi (Scorpiones: Buthidae) venom
DOI: 10.25345/c5vm43153
title: MassIVE Reanalysis RMSV000000597.2 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of MSV000080620/PXD002137 [2 out of 3] [launched by cfca6e4ba8934e65aa11617b56091339]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.