cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28481033
title: Supplementary Material for: A Pilot Study to Evaluate the Role of Obesity and Genetic Variants in Serum C-Reactive Protein Response to an Acute Fructose Load

description: 33 Introduction: Excess fructose intake has been linked to increased risk for dyslipidemia, insulin, 
34 resistance, hyperuricemia, inflammation, and obesity. In this human study, we investigated if serum 
35 CRP concentrations change after fructose consumption, and whether genetic variants and 
36 obesity status influences this change. Methods: Blood was drawn before and at four time points 
37 after administration of a fructose load (n=57). Serum concentrations of CRP were measured, 
38 and 11 single nucleotides polymorphisms (SNPs) (rs1205, rs1417938, rs1470515, rs3093068,
39 rs6588158, rs16842568, rs2259820, rs157581, rs2794521, rs3093062, rs17700633), 
40 previously associated with serum CRP were genotyped and assessed for their association with 
41 CRP levels. Results: Participants identifying as White (n = 37) had higher mean CRP levels across 
42 all time points compared to those identifying as Black (n = 20). Participants with obesity (BMI ≥ 30 
43 kg/m2) (n = 25) were younger and had higher mean CRP levels throughout the study period 
44 compared to those without (n = 32). All SNPs were in Hardy-Weinberg Equilibrium and their 
45 effect allele frequencies ranged between 11and 96%. Baseline CRP was associated with CRP 
46 SNPs rs1417938 and rs2794521 (p &lt;0.005), with rs2794521 also associated with CRP response to 
47 fructose challenge (p &lt; 0.005). The variability in responses to fructose and genetic associations 
48 were mainly observed in individuals without obesity. Obesity status was associated with early 
49 changes in CRP (0-30 min and 30-60min) whereas CRP SNPs were associated with later changes 
50 (60-120min and 120-180 min). Conclusion: Changes in serum CRP were associated with obesity
51 status or SNPs based on the time elapsed since fructose ingestion. Larger studies are needed to
52 confirm and validate these associations.
53 
54
DOI: 10.24427/2022/45/b/hs4/01414_pb_4
title: Dane z badań miasto Warszawa / Research data from Warszawa City
DOI: 10.15468/dl.umjw5c
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Camchaya loloana Kerr"
 ]
}

 The dataset includes 112 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004322-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yzunk4
title: Occurrence Download

description: A dataset containing 36183 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Netherlands",
 "TaxonKey is Meles meles (Linnaeus, 1758)"
 ]
}

 The dataset includes 36183 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004323-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48338/vu01-lofgtg
title: Evaluatie van Community Sponsorship pilot van VluchtelingenWerk Nederland

description: Bij Community Sponsorship bieden burgers – zogeheten sponsoren – emotionele, sociale, praktische en (in sommige landen) financiële ondersteuning bij de ontvangst en integratie van vluchtelingen die via het hervestigingsprogramma van UNHCR zijn toegelaten tot een land. In Nederland staat Community Sponsorship nog in de kinderschoenen. Dit evaluatierapport richt zich op het project Making the Dutch Connection; Pilots ‘Community Sponsorship’ in the Netherlands uitgevoerd door VluchtelingenWerk Nederland (VWN). De uitvoering van de pilot startte in het najaar van 2023 en eindigde in januari 2025. In drie gemeenten (Zaandam, Nissewaard en Zevenaar) werden sponsoren aan hervestigers verbonden om hen gedurende een periode van één jaar welkom te heten en, aanvullend op bestaande begeleiding door VWN en de gemeente, te ondersteunen bij hun start in de nieuwe omgeving.

De Refugee Academy van de Vrije Universiteit Amsterdam werd gevraagd de pilot te monitoren en evalueren. Het evaluatieonderzoek is opgezet om in kaart te brengen hoe de Community Sponsorship pilot van VWN in de drie gemeenten is geïmplementeerd, en wat de ervaren meerwaarde en uitdagingen van deze aanpak, in aanvulling op bestaande maatschappelijke begeleiding door VWN, zijn. Dit is bekeken vanuit vier perspectieven: van hervestigers, sponsoren, teamleiders van VWN die de pilot lokaal implementeren, en medewerkers van de drie betrokken gemeenten. De data zijn verzameld in twee rondes van interviews/focusgroepen met hervestigers, twee vragenlijsten voor sponsoren, maandelijkse teamleidermeetings en interviews met gemeentemedewerkers. Via ‘interactieonderzoek’, waarbij er continue uitwisseling plaatsvond tussen de hoofdonderzoeker en uitvoerende partijen, zijn opgedane inzichten onmiddellijk gedeeld en gebruikt voor de doorontwikkeling van de pilot in de praktijk.

Het rapport beschrijft de ervaren kansen en uitdagingen van de Community Sponsorship pilot en bevat aanbevelingen om dit model in Nederland op een betekenisvolle en duurzame manier verder te ontwikkelen.
DOI: 10.15468/dl.uejyzp
title: Occurrence Download

description: A dataset containing 120622 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Saudi Arabia",
 "Geometry POLYGON((33.23167 29.01599,34.95298 29.37312,34.5697 27.97743,41.76805 16.13689,42.82576 16.13689,42.64948 17.72346,45.58947 17.44997,46.43963 17.37089,49.00531 18.77484,52.48356 19.35455,54.51255 20.36904,55.45457 21.52846,52.84588 22.18063,51.25168 22.61542,51.614 24.06469,48.28067 28.34004,34.1884 32.12532,32.27496 29.25517,33.23167 29.01599))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingCountry is Saudi Arabia",
 "Year 2013-2023"
 ]
}

 The dataset includes 120622 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004313-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28478177
title: data_song_shao

description: The data that support the findings of the above article.
DOI: 10.6084/m9.figshare.28481039
title: Supplementary Material for: Electromagnetic Iontophoresis: A Novel Nonsurgical Method for the Treatment of Dense Vitreous and Retinal Hemorrhages

description: Introduction: Vitreous, retinal and suprochoroidal hemorrhages might develop secondary to trauma, retinal tear or detachment, neovascularization due to ischemic retina. If the clearance of retinal and vitreous hemorrhages can be accelerated, more effective treatments can be planned for the underlying pathology.
Case Presentations: We present 6 different cases with dense vitreous, preretinal, and subretinal hemorrhages due to Valsalva retinopathy, polypoid choroidal vasculopathy (PCV), diabetic retinopathy (DR), neovascular age-related macular degeneration (nAMD), retinitis pigmentosa with vasculitis, and myopic choroidal neovascularization. To accelerate the clearance of these dense intraocular hemorrhages, a novel nonsurgical method of electromagnetic iontophoresis (MagnoVisionTM) was used together with some appropriate medications in an outpatient setting without any complications or side effects. In all cases, liquefaction of the intraocular hemorrhage began by 5 days and mostly resolved by 10 days. This nonsurgical rapid clearance allowed us to diagnose and evaluate the underlying retinal and choroidal pathologies earlier and to treat them appropriately as early as possible.
Conclusion: Combined use of electromagnetic iontophoresis, subtenon platelet rich plasma (PRP) and bevacizumab injection, and oral bromelain can be considered as an effective and safe new treatment method for vitreous and retinal hemorrhages without any need for surgical intervention.
DOI: 10.6084/m9.figshare.28481075.v1
title: Supplementary Material for: Relapse Risk in Patients with Membranous Nephropathy after Inactivated COVID-19 Vaccination

description: Background
Although there have been reports of relapse or worsening of membranous nephropathy after receiving vaccines against coronavirus disease 2019 (COVID-19), the causal relationship or association between them has not been established. This study aimed to investigate the occurrence of relapse or worsening of membranous nephropathy following inactivated COVID-19 vaccination.
Methods
Patients who had been diagnosed with membranous nephropathy before receiving their first dose of vaccination, or before March 1, 2021 for unvaccinated patients, were included in the study. All patients were monitored at the Membranous Nephropathy Clinic of Huashan Hospital, Fudan University. The reasons for not receiving vaccines were investigated. The impact of COVID-19 vaccination on membranous nephropathy was assessed by comparing the relapse or worsening of membranous nephropathy within 12 months in vaccinated and unvaccinated patients with proteinuria &lt;3.5g/d. The baseline variables were balanced using cardinality matching. 
Results
A total of 353 patients with membranous nephropathy were included in the study, with 186 (53%) having received inactivated COVID-19 vaccines. Among the 167 unvaccinated participants, 114 (68%) expressed concerns about the possibility of disease relapse, and 47 (28%) were worried about the vaccine’s efficacy due to their immunosuppressive therapy. Of the 239 participants with proteinuria &lt;3.5g/d, 152 were vaccinated, and 16 (11%) experienced a relapse or worsening of the disease during the follow-up period, which was similar to the 14 (16%) observed in the unvaccinated group. Following cardinality matching, there was no difference in the rate of relapse or worsening between the two groups, with 10 (13%) in the vaccinated group and 11 (15%) in the unvaccinated group (Hazard ratio 0.98, 95% confidence interval 0.42-2.33).
Conclusion
Getting the inactivated COVID-19 vaccine did not lead to a higher risk of relapse or worsening in patients with membranous nephropathy.
DOI: 10.6084/m9.figshare.28481090
title: Supplementary Material for: Locus Coeruleus sexual dimorphism and its impact on cognitive impairment and cortical atrophy in Alzheimer’s Disease

description: Introduction: Experimental data suggest sexual dimorphism in the Locus Coeruleus (LC), with females exhibiting higher neuronal count and noradrenergic activity. In Alzheimer’s Disease (AD), progressive LC dysfunction may contribute early to pathogenesis, and female sex is a key risk factor for AD. This study aimed to investigate if such sex differences exist in humans and whether they influence the relationship between LC degeneration and AD features, such as cortical atrophy and cognitive decline.
Methods: Fifty-three healthy controls (HC), 70 Mild Cognitive Impaired (MCI) subjects, and 29 Alzheimer’s Disease Demented (ADD) patients underwent high-field brain MRI with LC-sensitive sequences following detailed neuropsychological and neurological assessments. LC integrity was measured using the LC Contrast Ratio (LCCR) parameter based on a previously published template approach.
Results: Within the HC and MCI groups, females showed higher LCCR values than males. A significant sex effect was observed in the relationship between LC integrity and cortical volume in the frontotemporal cortices, with males showing a stronger association.
Conclusion: LC structure and function may differ between sexes, influencing AD pathophysiology through distinct mechanisms. While this sexual dimorphism may have a minor role, it should be considered in clinical investigations and drug development research.
DOI: 10.34808/6377-7592
title: Mechanical response of human thoracic spine ligaments under quasi-static loading (Raw Data)

description: The RawDataSet contains experimental results from quasi-static uniaxial stretching tests of the ligaments of the human thoracic spine. The data includes results for the tensioning of Anterior Longitudinal Ligaments, Posterior Longitudinal Ligaments, Capsular Ligaments, Ligamentum Flavum, Interspinous Ligaments, and Supraspinous Ligaments.
The test was conducted on a custom-designed testing machine that has been registered for patent protection at the Patent Office of the Republic of Poland under number P.443948. All samples were preconditioned with 10% strain for 60 cycles at 1 Hz before the tests and were then allowed to recover for an additional 60 seconds. The samples were subsequently prestressed with a force of 5 N. During the tensile testing phase, all samples were subjected to a constant load at a strain rate of 0.5 s^(-1) until complete failure.
Folder names correspond to the date of testing. Subfolders contain information about the Functional Spine Unit from which the samples originate (for example, T1-T2 indicates ligaments between the first and second thoracic vertebrae). File names indicate the ligaments tested (for example, ALL for Anterior Longitudinal Ligament).
Data was saved in MATLAB file format. Channel_1_Data contains readings from the force sensor placed centrally above the stretched sample. Channel_2_Data, Channel_3_Data, and Channel_4_Data contain readings from three force sensors placed under the sample. Channel_5_Data contains information about the displacement of the arm stretching the sample.
DOI: 10.24427/2022/45/b/hs4/01414_5
title: Dane z badań miasto Wrocław / Research data from Wrocław City
DOI: 10.15468/dl.69wpe9
title: Occurrence Download

description: A dataset containing 300 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trichuris trichiura (Linnaeus, 1771)"
 ]
}

 The dataset includes 300 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004324-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/925k5dpnzt.1
title: Soil properties and pictures

description: Soil properties, FTIR, 13C NMR, FT-ICR MS, bacterial communities, and figures
DOI: 10.15468/dl.94hyxj
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Moschus berezovskii Flerov, 1929"
 ]
}

 The dataset includes 109 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004326-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25162043
title: Code + datasets for paper replication

description: All details on the code and datasets can be found here: https://github.com/nplresearch/higher_order_LRG
DOI: 10.6084/m9.figshare.25162043.v1
title: Code + datasets for paper replication

description: All details on the code and datasets can be found here: https://github.com/nplresearch/higher_order_LRG
DOI: 10.17632/4xgm4tj2fr.1
title: Supplemental Materials - JAAD-D-24-03512R1

description: Supplemental methods for JAAD article titled "Risk of Major Cardiovascular, Renal, and Thromboembolic Events in Patients with Systemic Sclerosis: A Longitudinal Cohort Analysis"
DOI: 10.17632/mr9c2b6zdf.1
title: Chronology of ungrouped achondrites northwest africa 11119 and 7325/8486: Imlications for early evolution of a heterogeneous crust on a differentiated planetesimal

description: All data used to generate results in the manuscript
DOI: 10.17632/mr9c2b6zdf
title: Chronology of ungrouped achondrites northwest africa 11119 and 7325/8486: Implications for early evolution of a heterogeneous crust on a differentiated planetesimal

description: All data used to generate results in the manuscript
DOI: 10.17632/mr9c2b6zdf.2
title: Chronology of ungrouped achondrites northwest africa 11119 and 7325/8486: Implications for early evolution of a heterogeneous crust on a differentiated planetesimal

description: All data used to generate results in the manuscript
DOI: 10.6084/m9.figshare.28090475
title: Cortical Representations of Affective Pain Shape Empathic Fear in Male Mice

description: -Codes and example datasets related to Choi et al., (2024) Nature Communications
-Source Data related to Choi et al., (2024) Nature Communications
-Original figures (Fig. 5, Fig. 6) related to Choi et al., (2024) Nature Communications
Here, using miniature endoscopic calcium imaging, we identify distinct and dynamic neural ensembles in the anterior cingulate cortex (ACC) that encode observational fear across both excitatory and inhibitory neurons in male mice. Notably, we find that the population dynamics encoding vicarious freezing information are conserved in ACC pyramidal neurons and are specifically represented by affective, rather than sensory, responses to direct pain experience. Furthermore, using circuit-specific imaging and optogenetic manipulations, we show that distinct populations of ACC neurons projecting to the periaqueductal gray (PAG), but not to the basolateral amygdala (BLA), selectively convey affective pain information and regulate observational fear.
DOI: 10.6084/m9.figshare.28090475.v1
title: Cortical Representations of Affective Pain Shape Empathic Fear in Male Mice

description: -Codes and example datasets related to Choi et al., (2024) Nature Communications
-Source Data related to Choi et al., (2024) Nature Communications
-Original figures (Fig. 5, Fig. 6) related to Choi et al., (2024) Nature Communications
Here, using miniature endoscopic calcium imaging, we identify distinct and dynamic neural ensembles in the anterior cingulate cortex (ACC) that encode observational fear across both excitatory and inhibitory neurons in male mice. Notably, we find that the population dynamics encoding vicarious freezing information are conserved in ACC pyramidal neurons and are specifically represented by affective, rather than sensory, responses to direct pain experience. Furthermore, using circuit-specific imaging and optogenetic manipulations, we show that distinct populations of ACC neurons projecting to the periaqueductal gray (PAG), but not to the basolateral amygdala (BLA), selectively convey affective pain information and regulate observational fear.
DOI: 10.17632/3yx53rgpfn.1
title: Replication Package for Transport Costs and the Locations of Upstream–Downstream Sectors in China and Indonesia

description: This file provides the replication package to reproduce the results in the paper Transport Costs and the Locations of Upstream–Downstream Sectors in China and Indonesia.
DOI: 10.15468/dl.m9aqwt
title: Occurrence Download

description: A dataset containing 642 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea pulchella Ledeb."
 ]
}

 The dataset includes 642 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004325-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25892755
title: Human respiratory airway progenitors derived from pluripotent cells generate alveolar epithelial cells and model pulmonary fibrosis

description: Dataset of all figures in manuscript describing the following (abstract)
Human lungs contain unique cell populations in distal respiratory airways and terminal bronchioles (RA/TRB) that accumulate in patients with lung injury and idiopathic pulmonary fibrosis (IPF), a lethal lung disease. As these populations are absent in rodents, deeper understanding requires a human in vitro model. Here we convert human pluripotent stem cells into expandable spheres, called induced respiratory airway progenitors (iRAPs), consisting of ~98% RA/TRB-associated cell types. One hPSC can give rise to 1010 iRAP cells. We differentiate iRAPs through a stage consistent with transitional type 2 alveolar epithelial (AT2) cells into a population corresponding to mature AT1 cells with 95% purity. iRAPs with deletion of HPS1, which causes pulmonary fibrosis in humans, replicate the aberrant differentiation and recruitment of profibrotic fibroblasts observed in IPF, indicating that intrinsic dysfunction of RA/TRB-associated alveolar progenitors contributes to HPS1-related IPF. iRAPs may provide a system suitable for IPF drug discovery and validation.
DOI: 10.6084/m9.figshare.25892755.v1
title: Human respiratory airway progenitors derived from pluripotent cells generate alveolar epithelial cells and model pulmonary fibrosis

description: Dataset of all figures in manuscript describing the following (abstract)
Human lungs contain unique cell populations in distal respiratory airways and terminal bronchioles (RA/TRB) that accumulate in patients with lung injury and idiopathic pulmonary fibrosis (IPF), a lethal lung disease. As these populations are absent in rodents, deeper understanding requires a human in vitro model. Here we convert human pluripotent stem cells into expandable spheres, called induced respiratory airway progenitors (iRAPs), consisting of ~98% RA/TRB-associated cell types. One hPSC can give rise to 1010 iRAP cells. We differentiate iRAPs through a stage consistent with transitional type 2 alveolar epithelial (AT2) cells into a population corresponding to mature AT1 cells with 95% purity. iRAPs with deletion of HPS1, which causes pulmonary fibrosis in humans, replicate the aberrant differentiation and recruitment of profibrotic fibroblasts observed in IPF, indicating that intrinsic dysfunction of RA/TRB-associated alveolar progenitors contributes to HPS1-related IPF. iRAPs may provide a system suitable for IPF drug discovery and validation.
DOI: 10.17632/5fpjmpw4dh.1
title: Insights into the Physical Processes of Dry Granular Flows

description: The data directly obtained for the angle of repose and the runout distances from the experiments.
DOI: 10.17632/p9t8mz749v.1
title: The effect of relational mobility on pursuit of beauty in appearance: Evidence from Chinese and the US samples

description: Data from Study 1 were collected using an experience sampling method, where participants reported their daily beauty-related behaviors. The dataset includes several variables: relational mobility (measured using a Likert scale), beauty-related behaviors (selfie editing, makeup application, weight control), and behavioral intentions (willingness to undergo cosmetic surgery). The data were gathered from participants in both China and the US, and all data were anonymized to ensure participant privacy. The mediation analysis conducted in Study 1 confirmed that relational mobility mediates the cultural differences in beauty-seeking behaviors between the two groups.
Study 2 involved manipulating relational mobility levels (high vs. low vs. control) for both Chinese and the US participants to examine the causal effect on beauty-related behaviors. The dataset from Study 2 includes experimental manipulations of relational mobility and measures of beauty-related behaviors such as clothing preferences, willingness to undergo cosmetic surgery, and photo-editing choices. Responses were collected via surveys and choice tasks, allowing for a comparison of the effect of relational mobility on beauty behaviors across cultures.
The findings from Study 2 provide evidence of a causal relationship between relational mobility and beauty-related behaviors, further supporting the hypothesis that relational mobility influences the pursuit of appearance enhancement in both cultural contexts.