cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.789p7jb3
title: Data from: The chestnut blight fungus world tour: successive introduction events from diverse origins in an invasive plant fungal pathogen.

description: Clonal expansion has been observed in several invasive fungal plant
 pathogens colonizing new areas, raising the question of the origin of
 clonal lineages. Using microsatellite markers, we retraced the
 evolutionary history of introduction of the chestnut blight fungus,
 Cryphonectria parasitica, in North America and western Europe. Combining
 discriminant analysis of principal components and approximate Bayesian
 computation analysis, it was shown that several introduction events from
 genetically differentiated source populations have occurred in both
 invaded areas. In addition, a low signal of genetic recombination among
 different source populations was suggested in North America. Finally, two
 genetic lineages were present in both invaded areas as well as in the
 native areas, suggesting the existence of genetic lineages with a high
 capacity to establish in diverse environments and host species. This study
 confirmed the importance of multiple introductions, but questioned the
 role of genetic admixture in the success of introduction of a fungal plant
 pathogen.
description: DonneeBrutCryphoArtMondial
DOI: 10.15468/dl.kbfs9v
title: Occurrence Download

description: A dataset containing 2736 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physalis peruviana",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 2736 records from 203 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000971-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/9aj-kb0-xf6
title: Tahulaspis sp. cf. ordinata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ze1-ghl-8sn
title: Pulcherproetus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xmw-zl2-72t
title: Pulcherproetus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0jp-xc7-ncg
title: Microconchida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fhy-pkx-tqb
title: Tremataspis rohoni

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5061/dryad.1035h
title: Data from: Phylogeography and population history of Leopardus guigna, the smallest American felid

description: The guigna (Leopardus guigna) is the smallest and most-restricted New
 World cat species, inhabiting only around 160,000 km2 of temperate rain
 forests in southern South America and is currently threatened by habitat
 loss, fragmentation and human persecution. We investigated phylogeographic
 patterns of genetic diversity, demographic history and barriers to gene
 flow with 116 individuals sampled across the species geographic range by
 analyzing 1,798 base pairs of the mtDNA (496 bp HVSI region, 720 bp NADH-5
 gene, 364 bp from 16S gene and 218 bp from ATP-8 gene) and 15
 microsatellite loci. Mitochondrial DNA data revealed a clear
 phylogeographic pattern with moderate separation between northern and
 southern Chilean populations supporting recognized subspecific partitions
 based on morphology. A recent demographic expansion was inferred for the
 southern-most group (San Rafael Lake), presumably due to the complete
 coverage of this area during the last glacial period, 28000–16000 years
 BP. Geographical barriers such as the Andes Mountains and the Chacao
 Channel have partially restricted historic and more-recent gene flow and
 the Chiloé Island population has diverged genetically since being
 separated from the mainland 7000 years BP. This is the first study of the
 genetic structure of this threatened species throughout its whole
 geographic range.
description: Leopardus guigna_Control
 Region HVS-ILeopardus
 guigna_NADH-5Leopardus
 guigna_16S
DOI: 10.3535/073-ek8-wam
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/twh-8gc-x1j
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ff7-glt-jhm
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rew-14a-4sd
title: Microconchida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/330-x9b-z65
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xnm-wnr-f2x
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5061/dryad.tf71f
title: Data from: Facilitated exploitation of pollination mutualisms: fitness consequences for plants

description: Mutualisms are only rarely one-to-one interactions: each species generally
 interacts with multiple mutualists. Exploitation is ubiquitous in
 mutualisms, and we would therefore expect that each mutualist interacts
 with multiple exploiters as well. Exploiter species may also interact with
 one another. For example, the action of one exploiter species might open
 the opportunity for exploitation by a second species. Exploitation is
 common in many plant–pollinator mutualisms: ‘primary’ nectar robbers feed
 through holes they make in flowers, which can be subsequently used by
 ‘secondary’ nectar robbers unable to create holes themselves. The overall
 effect of nectar robbing on plant fitness is often (although not always)
 negative. No study has separated the effects of interacting with primary
 vs. secondary robbers. Here, we examine the effects of primary vs.
 secondary nectar robbing on pollinator visitation rate and female fitness
 in Ipomopsis aggregata. Manipulating the type of nectar robbing that
 flowers experienced, we found that secondary nectar robbing inflicted
 fitness costs to plants beyond that inflicted by primary robbing alone.
 Secondary nectar robbing significantly reduced pollen receipt to flowers,
 as well as fruit and seed production. Although the causes are elusive, the
 effect may be attributed to changes in pollinator behaviour at these
 plants. Synthesis. Our findings provide evidence that interacting with
 multiple exploiters can lead to increased negative effects for mutualists,
 and highlight the importance of incorporating multiple exploiters into the
 conceptual framework of mutualism.
description: 2016_Richman_IpomopsisSecondaryRobbingContains metadata and all data reported in the publication
DOI: 10.3535/lyq-jmy-3k5
title: Cornulites sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nhv-awz-q1n
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2tw-y2p-9kc
title: Cornulites sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gw1-c4v-mqm
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3h1-ynt-h1h
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/72t-qf2-h03
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5061/dryad.1916
title: Data from: A new squeaker frog (Arthroleptidae: Arthroleptis) from the mountains of Cameroon and Nigeria

description: A new species of squeaker frog (genus Arthroleptis) is described from the
 northern mountains of the Cameroon Volcanic Line, a species-rich region
 within the West African biodiversity hotspot. This new species is
 associated with human-altered landscapes, including farms and grasslands,
 and is known from the highland areas near Bamenda, including Mt. Oku,
 Cameroon, as well as the Obudu and Mambilla Plateaus of eastern Nigeria.
 The known distribution suggests that it may eventually also be found
 throughout the Acha- Tugi Ridge that traverses the Cameroon–Nigeria
 border. More than 40 years ago, a specimen from one of these populations
 was recognized as probably representing a new species, but no further work
 was published on this material. We posit that the taxonomy of this new
 species has proven problematic because of morphological similarity to
 Arthroleptis poecilonotus. Although in some ways resembling A.
 poecilonotus, a molecular phylogeny based on mitochondrial gene sequence
 data demonstrates that the new species is not closely related to A.
 poecilonotus and, instead, forms a clade with A. krokosua, A. perreti, and
 A. variabilis. The new species is diagnosable by the combination of
 medium–small body size (24–29 mm snout–vent length in adult females), the
 color patterns of the venter and head, and a relatively stout hindlimb
 with a prominent inner metatarsal tubercle. The description of this new
 species further highlights these mountains as an important region of
 endemism within the Cameroon Volcanic Line.
description: Alignment of
 mitochondrial DNANexus file containing
 aligned DNA sequences for mitochondrial 12S and 16S ribosomal RNA genes,
 and intervening transfer RNA gene for Valinepalava.nex
DOI: 10.3535/a9r-rx8-6sh
title: Calymene

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tx9-82b-y5a
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dhf-6ez-5xa
title: Phlebolepis elegans

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gjj-6gn-8w1
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3ls-ezy-8we
title: Calymene

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cfk-ejs-wcf
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5061/dryad.550nd48
title: Data from: Nuptial gift chemistry reveals convergent evolution correlated with antagonism in mating systems of harvestmen (Arachnida, Opiliones)

description: Nuptial gifts are material donations given from male to female before or
 during copulation, and are subject to sexual selection in a wide variety
 of taxa. The harvestman genus Leiobunum has emerged as a model system for
 understanding the evolution of reproductive morphology and behavior, as
 transitions between solicitous and antagonistic modes of courtship have
 occurred multiple times within the lineage and are correlated with
 convergence in genital morphology. We analyzed the free amino acid content
 of nuptial gift secretions from five species of Leiobunum using gas
 chromatography-mass spectrometry. Multivariate analysis of the free amino
 acid profiles revealed that, rather than clustering based on phylogenetic
 relationships, nuptial gift chemical composition was better predicted by
 genital morphology and behavior, suggesting that convergent evolution has
 acted on the chemical composition of the nuptial gift. Specifically,
 species with solicitous courtship produce gifts consisting of a 19% larger
 proportion of essential amino acids as compared to those with more
 antagonistic courtship interactions. This work represents the first
 comparative study of nuptial gift chemistry within a phylogenetic
 framework in any animal group and as such contributes to our understanding
 of the evolution of reproductive diversity and the participant role of
 nuptial gift chemistry in mating system transitions.
description: Kahn et al.
 dataSpecimen information and
 raw dataKahn et al
 data.xlsxKahn et al. R
 scriptR script used for
 performing phylogenetically informed analyses of nuptial gift chemical
 compositionKahn et al
 ChemEcolLambdaScript.RKahn et al. chemical
 dataChemical composition
 data for analyses performed in RKahn et al
 ChemDataForR.txtKahn et al.
 phylogenyTree file for analyses
 performed in RKahn et al
 TreeForR.txt
DOI: 10.3535/h8c-vda-jjn
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mll-3r3-1x8
title: Calymene

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4yl-vz3-en4
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ykx-7ka-3m3
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5061/dryad.1k7h7
title: Data from: A predation cost to bold fish in the wild

description: Studies of predator-mediated selection on behaviour are critical for our
 understanding of the evolution and maintenance of behavioural diversity in
 natural populations. Consistent individual differences in prey behaviour,
 especially in the propensity to take risks (“boldness”), are widespread in
 the animal kingdom. Theory predicts that individual behavioural types
 differ in a cost-benefit trade-off where bolder individuals benefit from
 greater access to resources while paying higher predation-risk costs.
 However, explicitly linking predation events to individual behaviour under
 natural conditions is challenging and there is currently little data from
 the wild. We assayed individual behaviour and electronically tagged
 hundreds of fish (roach, Rutilus rutilus) before releasing them into their
 lake of origin, thereby exposing them to predation risk from avian apex
 predators (cormorants, Phalacrocorax carbo). Scanning for regurgitated
 tags at the cormorant roosting site provided data on individual predation
 events. We found that fish with higher boldness have a greater
 susceptibility to cormorant predation compared to relatively shy,
 risk-averse individuals. Our findings hereby provide unique and direct
 evidence of behavioural type-dependent predation vulnerability in the
 wild, i.e. that there is a predation cost to boldness, which is critical
 for our understanding of the evolution and maintenance of behavioural
 diversity in natural populations.
description: SR_2017The data included in this directory was used for analysis in the publication "A predation cost to bold fish in the wild".
DOI: 10.3535/jpq-zjc-zme
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gr2-zxx-pry
title: Phlebolepis elegans

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k1x-q99-6k8
title: Thelodus sculptilis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mxf-pf8-a9n
title: Phlebolepis elegans

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zek-aq1-jhh
title: Archegonaspis integra

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5061/dryad.242t8
title: Data from: Let’s stay together? Intrinsic and extrinsic factors involved in pair bond dissolution in a recolonizing wolf population

description: For socially monogamous species, breeder bond dissolution has important
 consequences for population dynamics, but the extent to which extrinsic or
 intrinsic population factors causes pair dissolution remain poorly
 understood, especially among carnivores. Using an extensive life-history
 data set, a survival analysis and competing risks framework, we examined
 the fate of 153 different wolf (Canis lupus) pairs in the recolonizing
 Scandinavian wolf population, during 14 winters of snow tracking and DNA
 monitoring. Wolf pair dissolution was generally linked to a mortality
 event and was strongly affected by extrinsic (i.e. anthropogenic) causes.
 No divorce was observed, and among the pair dissolution where causes have
 been identified, death of one or both wolves was always involved. Median
 time from pair formation to pair dissolution was three consecutive winters
 (i.e. approximately 2 years). Pair dissolution was mostly human-related,
 primarily caused by legal control actions (36·7%), verified poaching
 (9·2%) and traffic-related causes (2·1%). Intrinsic factors, such as
 disease and age, accounted for only 7·7% of pair dissolutions. The
 remaining 44·3% of dissolution events were from unknown causes, but we
 argue that a large portion could be explained by an additional source of
 human-caused mortality, cryptic poaching. Extrinsic population factors,
 such as variables describing the geographical location of the pair, had a
 stronger effect on risk of pair dissolution compared to anthropogenic
 landscape characteristics. Population intrinsic factors, such as the
 inbreeding coefficient of the male pair member, had a negative effect on
 pair bond duration. The mechanism behind this result remains unknown, but
 might be explained by lower survival of inbred males or more complex
 inbreeding effects mediated by behaviour. Our study provides quantitative
 estimates of breeder bond duration in a social carnivore and highlights
 the effect of extrinsic (i.e. anthropogenic) and intrinsic factors (i.e.
 inbreeding) involved in wolf pair bond duration. Unlike the effects of
 intrinsic and extrinsic factors that are commonly reported on individual
 survival or population growth, here we provide quantitative estimates of
 their potential effect on the social unit of the population, the wolf
 pair.
description: data_JAEThis dataset contains the data used in the article titled: "Let’s stay together? Intrinsic and extrinsic factors involved in pair bond dissolution in a recolonizing wolf population".data_pair_finalR.xlsx
DOI: 10.3535/a8f-ksp-9r7
title: Turinia pagei

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f2x-ea2-pet
title: Oniscolepis dentata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3xg-pry-fmd
title: Turinia pagei

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wbs-4l0-st1
title: Turinia pagei

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dba-1nd-fhw
title: Pulcherproetus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xxw-561-mhz
title: Thelodus carinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5061/dryad.9h95737
title: Data from: Unpredictable movement as an anti-predator strategy

description: Prey animals have evolved a wide variety of behaviours to combat the
 threat of predation, and these have been generally well studied. However,
 one of the most common and taxonomically widespread antipredator
 behaviours of all has, remarkably, received almost no experimental
 attention: so-called ‘protean’ behaviour. This is behaviour which is
 sufficiently unpredictable to prevent a predator anticipating in detail
 the future position or actions of its prey. In this study, we used human
 ‘predators’ participating in 3D virtual reality simulations to test how
 protean (i.e. unpredictable) variation in prey movement affects
 participants’ ability to visually target them as they move (a key
 determinant of successful predation). We found that targeting accuracy was
 significantly predicted by prey movement path complexity, although,
 surprisingly, there was little evidence that high levels of
 unpredictability in the underlying movement rules equated directly to
 decreased predator performance. Instead, the specific movement rules
 differed in how they impacted on targeting accuracy, with the efficacy of
 protean variation in one element depending on the values of the remaining
 elements. These findings provide important insights into the understudied
 phenomenon of protean antipredator behaviour, which are directly
 applicable to predator-prey dynamics within a broad range of taxa.
description: DataThe data used in the
 analyses presented in this paper
DOI: 10.3535/hr2-mbv-p63
title: Pulcherproetus kuressaarensis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7dx-bcl-8eg
title: †Proetidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/svr-cyt-v1n
title: Pulcherproetus kuressaarensis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5061/dryad.1gr29
title: Data from: Safety and immunogenicity of the Na-GST-1 hookworm vaccine in Brazilian and American adults

description: Necator americanus Glutathione-S-Transferase-1 (Na-GST-1) plays a role in
 the digestion of host hemoglobin by adult N. americanus hookworms.
 Vaccination of laboratory animals with recombinant Na-GST-1 is associated
 with significant protection from challenge infection. Recombinant Na-GST-1
 was expressed in Pichia pastoris and adsorbed to aluminum hydroxide
 adjuvant (Alhydrogel) according to current Good Manufacturing Practice.
 Two Phase 1 trials were conducted in 142 healthy adult volunteers in the
 United States and Brazil, first in hookworm-naïve individuals and then in
 residents of a N. americanus endemic area in Brazil. Volunteers received
 one of three doses of recombinant Na-GST-1 (10, 30, or 100 μg) adjuvanted
 with Alhydrogel, adjuvanted with Alhydrogel and co-administered with an
 aqueous formulation of Glucopyranosyl Lipid A (GLA-AF), or the hepatitis B
 vaccine. Vaccinations were administered via intramuscular injection on
 days 0, 56, and 112. Na-GST-1/Alhydrogel was well tolerated in both
 hookworm-naïve and hookworm-exposed adults, with the most common adverse
 events being mild to moderate injection site pain and tenderness, and mild
 headache and nausea; no vaccine-related severe or serious adverse events
 were observed. Antigen-specific IgG antibodies were induced in a
 dose-dependent fashion, with increasing levels observed after each
 vaccination in both trials. The addition of GLA-AF to Na-GST-1/Alhydrogel
 did not result in significant increases in specific IgG responses. In both
 the US and Brazil studies, the predominant IgG subclass induced against
 Na-GST-1 was IgG1, with lesser amounts of IgG3. Vaccination of both
 hookworm-naïve and hookworm-exposed adults with recombinant Na-GST-1 was
 safe, well tolerated, and resulted in significant antigen-specific IgG
 responses. Based on these results, this vaccine will be advanced into
 clinical trials in children and eventual efficacy studies.
description: Na-GST-1 immunigenicity
 data
DOI: 10.3535/qkg-vsc-g7q
title: †Proetidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vwp-z8m-wnn
title: Pulcherproetus kuressaarensis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pw8-p7t-cq5
title: †Proetidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qld-dnb-v2s
title: Pulcherproetus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.