cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/pjpxdmw84h.1
title: Brixton test data in bvFTD and SD

description: The Brixton Spatial Anticipation Test is a widely used test of executive function. There has hitherto been surprisingly little systematic examination of the usefulness of the test in behavioural variant frontotemporal dementia (bvFTD), the prototypical degenerative disorder of the frontal lobes. The dataset relates to a study that explored the sensitivity and specificity of the Brixton test through a direct comparison of 76 patients with bvFTD and 34 with semantic dementia (SD), characterised by degeneration of the temporal lobes. All patients had been referred to a specialist cognitive clinic within a neuroscience centre and the Brixton test had been administered as part of their clinical diagnostic work-up. The study of patients' Brixton performance investigated both quantitative (error scores, sets achieved) and qualitative (error types) aspects of performance. bvFTD patients, as predicted, performed significantly more poorly than SD patients and achieved fewer sets (i.e. identified fewer rule shifts). bvFTD patients were distinguished too by more frequent perseverative and random errors. Perseverations could be subdivided into those representing repetition of an immediately preceding response, an immediately preceding rule, or an earlier rule that is not the immediately preceding one. A distinction could also be drawn between perseverations of the immediately preceding rule that take note of the position of the blue circle (stimulus-related) and those that do not (stimulus unrelated). bvFTD patients could be distinguished from SD by the presence of the latter. The data confirm the value of the Brixton test in the clinical assessment of bvFTD and point to the clinical and theoretical value of analysis of errors.
DOI: 10.25345/c5jv1g
title: MassIVE MSV000086155 - Mitochondria inhibitor University of Washington
title: Mitochondrial respiration in mammalian cells not only generates ATP to meet their own energy needs but also couples with biosynthetic pathways to produce metabolites that can be exported to support neighboring cells. However, how defects in mitochondrial respiration influence these biosynthetic and exporting pathways remains poorly understood. Mitochondrial dysfunction in retinal pigment epithelium (RPE) cells is an emerging contributor to the death of their neighboring photoreceptors in degenerative retinal diseases including age-related macular degeneration. In this study, we used targeted-metabolomics and 13C tracing to investigate how inhibition of mitochondrial respiration influences the intracellular and extracellular metabolome. We found inhibition of mitochondrial respiration strikingly influenced both the intracellular and extracellular metabolome in primary RPE cells. Intriguingly, the extracellular metabolic changes sensitively reflected the intracellular changes. These changes included substantially enhanced glucose consumption and lactate production, reduced release of pyruvate, citrate and ketone bodies, and massive accumulation of multiple amino acids and nucleosides. In conclusion, these findings reveal a metabolic signature of nutrient consumption and release in mitochondrial dysfunction in RPE cells. Testing medium metabolites provides a sensitive and noninvasive method to assess mitochondrial function in nutrient utilization and transport.
DOI: 10.17632/wr3kmzjwwk.1
title: Watada, E. et al., and Kobayashi, T.

description: Data for our paper in Mol Cell Biol (2020) "Age-dependent ribosomal DNA variations in mice"
DOI: 10.17632/xvyv59vwvz.1
title: ClaMP (Classification of Malware with PE headers)

description: Dataset related to Portable Executable files for malware detection. The details can be found in the published article titled "A learning model to detect maliciousness of portable executable using integrated feature set" authored by Ajit Kumar, K.S.Kuppusamy, and G.Aghila.
DOI: 10.17632/8532xrbkhk.1
title: Trihelota, a new and unusual helotid beetle genus from mid-Cretaceous Burmese amber (Coleoptera: Helotidae)
DOI: 10.17632/hg4fjvtzcm.1
title: Brown Hook 2020

description: This data is the underlying metrics for figures published in Brown Hook (2020)
DOI: 10.17632/zkv9mjjm53.2
title: Friend or foe? Effects of host immune activation on the gut microbiome in the caterpillar Manduca sexta

description: Raw datasets that accompany the paper Friend or foe? Effects of host immune activation on the gut microbiome in the caterpillar Manduca sexta
DOI: 10.17632/24bxcw9vxc.1
title: Data set on Revisiting intercropping indices with respect to potato-legume intercropping systems

description: This data set contain the data used in computing 16 intercropping indices with classical examples of the graphs for easy reference and guidance to all users
DOI: 10.17632/sch72cpyjv.1
title: User Questions from Tweets on COVID-19: AnExploratory Study

description: Social media platforms, such as Twitter, provide a suitable avenue for users (people or patients) concerned on health questions to discuss and share information with each other. In December 2019, a few coronavirus disease cases were first reported in China. Soon after, the World Health Organization (WHO) declared a state of emergency due to the rapid spread of the virus in other parts of the world. In this work, we used automated extraction of COVID-19 discussion from Twitter and a natural language processing (NLP) method based on topic modeling to discover the main questions related to COVID-19 from tweets. Moreover, we created a Named Entity Recognition (NER) model to identify the main entities of four different categories: disease, drug, person, and organization. Our findings can help policy makers and health care organizations to understand the issues of people on COVID-19 and it can be used to address them appropriately.
DOI: 10.17632/rv33wfc5n5.1
title: Casusopdracht BS1

description: Casusopdracht BS1
DOI: 10.17632/v992cb6bw7.2
title: HFRD: Human Face Recognition Datasets on COVID-2019 pandemic stage (v2020)

description: The HFRD (v2020) dataset includes 4835 images of masked human faces. Originally, the faces were taken from three different publicly available datasets: MUCT, FASSEG, and AT&T datasets. The collected subsets of the HFRD dataset contain standard images that are previously used in the field of facial recognition, and then we added masks to cover the nose, mouth, and chin area, as for what remains visible from the face are the eyes, forehead, and hair. Thus, we have introduced new standard images for use in the field of partial facial recognition (PFR) domain. The new structure of the current HFRD store inherits the structure of each original dataset, which means there are three main datasets: MaskedMUCT contains five folders, MaskedFASSEG contains four folders, and MaskedAT&T has organized in 40 folders. This store of HFRD masked face datasets are not only inheriting the structure of the original datasets, but also inheriting the varsity of them. Finally, all folders consist of facial images surrounded and covered by various shapes of masks. Consequently, the proposed new enhanced HFRD datasets have been developed based on the impact of the pandemic COVID-2019 stage. Our enhanced improved Human Face Recognition Datasets (HFRD) datasets could be used to test studies of FR algorithms for human identification. The obtained outcomes from this enhanced HFRD data can also be useful in providing more knowledge for the Artificial Intelligence (AI) tools, and decision support system for predicting the spread of COVID-2019.
DOI: 10.17632/ycr7w5pvkt.1
title: Dataset of tree inventory and canopy structure in poplar plantations in Northern Italy

description: The repository stores data collected in 38 square (50 x 50m) 0.25 ha plots representative of poplar plantations in Lombardy Region (Northern Italy), which were used to calibrate optical informations derived from unmanned aerial vehicle (UAV) and satellite (Sentinel-2) sensors. In each plot, the diameter at breast height (D) was measured using a caliper. Tree height (H), stem volume (Vst) and crown volume (Vcr) were derived from D using allometric equations developed in an independent study (Chianucci et al. 2020: https://doi.org/10.1093/forsci/fxaa021). Additional canopy attributes were derived in each plot from 12-20 optical images obtained using digital cover photography (DCP), following the procedure described by Chianucci 2020 ( https://doi.org/10.1139/cjfr-2019-0055). The raw datasets consist of 2591 records (trees) associated to inventory measurements and 616 records (images) associated to optical canopy measurements. An R code was also provided to calculate plot-level attributes from raw datasets.
DOI: 10.17632/thht8xjgtt.1
title: Human Positive Cofactor 4 Serves as a Potential Ageing-associated Gene and Accelerates Ageing by Disrupting Proteostasis

description: Original data was available in the "Original data.zip"
DOI: 10.17632/dj98d9z2rr.1
title: Multiplexed sequential DNA FISH in C. elegans embryos. Sawh and Mango.

description: Raw data from Sawh and Mango, STAR Protocols, 2020.
DOI: 10.17632/chywxb7wb7.1
title: All life 2
DOI: 10.17632/ppj493vx4j.1
title: Garcia-Cicco and Garcia-Schmidt: "Revisiting the Exchange Rate Pass Through: A General Equilibrium Perspective"

description: Repliction codes for Garcia-Cicco and Garcia-Schmidt (2020) "Revisiting the Exchange Rate Pass Through: A General Equilibrium Perspective"
DOI: 10.17632/s77x6dxp68.3
title: Semi-insulating Gallium Nitride on sapphire (GaN) surface reflection voltages in 107.35 to 165 GHz when stimulated using 0.69ns pulsed laser with low power densities

description: We have used a newly developed quasi-optical free-space time-resolved millimeter-wave conductivity (TR-mmWC) system operated in the D-band (107.35 GHz to 165 GHz) with 0.5GHz resolution to acquire surface reflected probe beam voltages from high resistivity (105 Ohm-cm) 434 µm thick semi-insulating n-type gallium nitride (GaN) wafer with thickness 5 µm on sapphire. The source for millimeter waves is the backward wave oscillator (BWO) with a spot diameter ~3mm, and the GaN sample is of commercial grade and is rotated at an angle of 65.40 from the probe beam direction. Probe beam photon energies are in the range of 0.4 to 0.7 meV. GaN refractive index for 532 nm laser pulse is 2.33 with a large penetration depth compared to its thickness. Zero-bias Schottky diode (ZBD) with a responsivity ~ 3.6V/mW is used for signal detection. The stimulus of the GaN surface is provided using a 532 nm DPSS laser with pulse-width 0.69 ns repeated every millisecond. The idea of performing this experiment was to note changes in photo-emission induced reflection voltages (dc) off of GaN surface as a function of laser intensity, and whether the differences in the illuminated and dark state reflected voltages bear any relationship with the laser fluence. GaN has a bandgap ~3.4 eV we use the 532nm pulse with energy hence no radio-frequency signal due to excess charge carrier kinetics is observed (no transients are seen either in reflection or transmission mode) however, changes in d.c. voltages are exhibited when GaN surface is illuminated with a laser pulse in the intensity range 10.1µJ/cm2 to 5.3nJ/cm2 . The differences between the probe reflection voltages while the laser is ON (illuminated by a spot diameter ~10mm) and OFF (dark) when plotted as a function of laser intensity, a rapid change from slightly negative to a steep positive transition occurs when the laser intensity is around 0.65µJ cm-2. Four sets of data are uploaded for interested users. The laser pump intensity in micro-Joules per sq. cm appears in the filename itself for each ASCII delimited numeric data saved as a comma-separated variable (.csv) file. The probe beam frequency is swept automatically using LABVIEW and the sampling period is 500ms. Column 1 of each file is probe beam frequency, column2 is the reflected voltage (average of 30 samples) from the zero-bias diode detector (ZBD), an average of 30 samples collected for each probe frequency bin. The third column is the standard deviation of the laser ON voltage sample set. The fourth column is the same as column 2 but when the laser is switched off (dark) and the fifth column is the same as the third column except for the reflected probe beam voltage standard deviation under dark condition.
DOI: 10.21227/6hes-0k66
title: Experimental database for detecting and diagnosing broken bar defects in a three-phase induction motor.

description: The data set contains electrical and mechanical signals from experiments on three-phase induction motors. The experimental tests were carried out for different mechanical loads on the induction motor axis and different severities of broken bar defects in the motor rotor, including data regarding the rotor without defects. Ten repetitions were performed for each experimental condition.
DOI: 10.17632/8pb5x5cd24.2
title: Combination of lovastatin and 2-deoxy-D-glucose in human colorectal cancer cells

description: Supplementary S1 is "The effect of the combination of lovastatin and 2DG, and further inhibition of autophagy on cell proliferation in L02 cell lines"
DOI: 10.17632/8d92n72hj3.1
title: Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation

description: Raw experimental data
DOI: 10.17632/v89nx37d55.1
title: Novel tissue processing of bovine saphenous veins achieves high in vivo patency of extracellular matrix small diameter vascular grafts

description: Production of an off-the-shelf small diameter vascular graft via a novel tissue processing method (i.e., Antigen removal)
DOI: 10.17632/58cstfzk69.1
title: Data for Quantifying shallow overland flow under laboratory rainfall simulations using thermal and LiDAR imagery

description: This Dataset contain all the Data used in the article "Quantifying shallow overland flow under laboratory rainfall simulations using thermal and LiDAR imagery " written by Danino, D., Svoray, T., Thompson. S., Cohen, A., Crompton, O., Volk, E., Argaman, E., Levi, A., Cohen, Y., Narkis, K. & Assouline, S.
DOI: 10.17632/xjvsp3dhzf.1
title: Single cortical neurons as deep artificial neural networks

description: This dataset is related to the work "Single cortical neurons as deep artificial neural networks" Code, data and pretrained networks of the work can be found at following links below: Live Notebook with main result replicated: https://www.kaggle.com/selfishgene/single-neuron-as-deep-net-replicating-key-result Dataset and pretrained networks: https://www.kaggle.com/selfishgene/single-neurons-as-deep-nets-nmda-test-data Live Notebook exploring the dataset: https://www.kaggle.com/selfishgene/exploring-a-single-cortical-neuron Full Github repo: https://github.com/SelfishGene/neuron_as_deep_net
DOI: 10.17632/f72dhp8y6h.1
title: Imbalance of regulatory and cytotoxic SARS-CoV-2-reactive CD4+ T cells in COVID-19. Meckiff et al.

description: Supplemental Tables related to the manuscript "Imbalance of regulatory and cytotoxic SARS-CoV-2-reactive CD4+ T cells in COVID-19" by Meckiff et al.
DOI: 10.17632/fh557t857g.1
title: Supplementary Information: Laboratory effects of COVID-19 Infection in pregnant women and their newborns: a systematic review and meta-analysis

description: Data extracted from the articles selected for this meta-analysis is included in the Supplementary information, as well as all results up to four significant figures.
DOI: 10.17632/vdcvjtsc4m.1
title: Los Humeros Geothermal Field - Shear wave splitting data

description: A study of anisotropic characteristics based on shear wave splitting parameters (fast shear wave polarization and delay time) was carried out from microearthquakes recorded from a network of thirteen seismic stations temporarily installed in Los Humeros Volcanic Complex, Puebla, Mexico from 2011 to 2016.
DOI: 10.17632/b3czpfhjrm.1
title: Bandyopadhyay 2020 source data
DOI: 10.17632/cpsm6mcg62.1
title: Curved Fibre Path Optimisation for Improved Shape Adaptive Composite Propeller Blade Design

description: This dataset is for research article 'Curved Fibre Path Optimisation for Improved Shape Adaptive Composite Propeller Blade Design'. This dataset includes 1. Ansys FE structural analysis file for a. Propeller blade model with optimised straight layup b. Propeller blade model with optimised curved layup 2. Cantilever plate experimental data (load vs tip deflections) 3. IGA fem code for the analysis of Hydrofoil and Propeller blade model (written in matlab) For IGA code, i) Open the file in matlab. ii) Add all the files in the pathway. iii) For Wageningen B5-60 analysis, - Run 'Wageningen_data_skew' (Change layup orientations or material properties here) - Run 'IgaFem_Bseris_Fbangle' (both under subfolder 'Propeller analysis' of folder 'IGAmodel_calculation') For hydrofoil model, - Run 'Data_hydrofoil_straight' (Change layup orientations or material properties here) - Run 'IgaFem_hydrofoil_1'
DOI: 10.6084/m9.figshare.12909878.v2
title: Monthly TROPOMI NO2 averages over CONUS

description: Level 3 monthly averaged TROPOMI NO2 tropospheric vertical column contents re-gridded to 0.01 x 0.01 degree spatial resolution. All data with a quality assurance value (qa_value) below 0.75 have been removed when computing these averages.<br>Latitudes and Longitudes are the center points. Add or subtract 0.005 degrees to get the edges.
DOI: 10.17632/r69xp7xsky.4
title: Dataset from Gut microbiome is affected by inter-sexual and inter-seasonal variation in diet for thick-billed murres (Uria lomvia)

description: Stable isotope ratio, sexing, and sample collection data of Thick-billed murres from Coats Island, Canada.
DOI: 10.17632/p8czktrz7k.2
title: Kaji_EICont

description: spike -- size: (1, N+2) 1st~Nth components: spike data (time stamps of spike happened) (N+2)th compoent: Number of cortical neurons and maximum time step time bin size: 1ms This raw data is stored for individual data samples. cellnum: number of neurons Sheet1: excitatory neurons Sheet2: inhibitory neurons FR: firings-rate histograms [log10] Sheet 1: frequency [log10] Sheet2: histograms of excitatory neurons (for 7 data set) Sheet3: histograms of inhibitory neurons (for 7 data set) Weights: histograms of connectivity intensities Sheet 1: weights (=intensities) [log10] Sheet2: histograms of excitatory neurons (for 7 data set) Sheet3: histograms of inhibitory neurons (for 7 data set) KC_layers: This data is a summary of K-core (KC) clusterings separately calculated from individual layers or all cortical layers. Individual sheets correspond with 7 data samples. A,B: excitatory neurons, D,E: inhibitory neurons A,D: labels of data, (layer1-3, layer4, layer5, layer6, all), B,E : their values All means KC values for all layers FVS_layers: The data format is same as KC_layers. The included data is Feedback Vertex Set. Degree: degree histograms Sheet1: values of x axis (degree [log10]) Sheet2: in-degree histograms for seven data samples Sheet3: out-degree histograms for seven data samples
DOI: 10.25345/c5f17j
title: MassIVE MSV000086156 - Ubiquitylome analysis of Arabidopsis roots.
title: Ubiquitylome analysis of Arabidopsis roots. 10 day old Arabidopsis roots were treated with mock, DMSO, or bortezomib for 3 hours. Root tissue was processed using the phenol-FASP method described in https://doi.org/10.1002/pmic.201800220. Ubiquitin remnant peptides were enriched using an anti-diglycine lysine antibody from PTM-biolabs (PTM-1104). non-enriched as well as di-gly enriched peptides were labeled with TMT10 or TMT16 reagents. Both label-free and TMT labeled peptides were analyzed by LC-MS.
DOI: 10.17632/wtc6jc5y9t.1
title: Data of green synthesized AgCoPO4 nanoparticles: Optical studies and theoretical modelling

description: The data of the absorption spectra and XRD of green synthesized AgCoPO4 nanoparticles.
DOI: 10.6084/m9.figshare.12964925.v1
title: COVID_19_proximity_scores.csv

description: COVID_19_proximity_scores.csv
DOI: 10.6084/m9.figshare.12964925
title: COVID_19_proximity_scores.csv

description: COVID_19_proximity_scores.csv
DOI: 10.7910/dvn/or13nn/cewgyn
title: sptgmos_catalogs_all.tar.gz

description: ASCII catalog files containing the SPT-GMOS data products.
DOI: 10.7910/dvn/or13nn/7sa4tp
title: sptgmos_spectra_all.tar.gz

description: All reduced 1D spectra from SPT-GMOS
DOI: 10.25345/c59b5n
title: MassIVE MSV000086157 - Inhibition of mitochondrial respiration LCMS data
title: Mitochondrial respiration in mammalian cells not only generates ATP to meet their own energy needs but also couples with biosynthetic pathways to produce metabolites that can be exported to support neighboring cells. However, how defects in mitochondrial respiration influence these biosynthetic and exporting pathways remains poorly understood. In this study we used targeted-metabolomics to investigate how inhibition of mitochondrial respiration influences the intracellular and extracellular metabolome.
DOI: 10.20375/0000-000d-1cff-6
title: Revistas culturales históricas en lengua española desde el modernismo hasta las vanguardias: procesos de modernización y formación de redes transnacionales
title: Spanish-language Cultural Magazines from Modernismo to Avant-Garde: Processes of Modernization and Transnational Network Formation

description: This DFG-funded research project studied a large corpus of cultural magazines of the Spanish-speaking modern age in Spain and Hispanic America. The research project started in 2017 and lasted until 2020; its project number is 327964298. Two sub-projects, one with an emphasis on Modernismo (1890-1914) and the other one with an emphasis on the avant-garde (1920-1936), were implemented, crossing fields during the transitional phase of the so-called Posmodernismo (about 1910-1920). Both sub-projects were closely connected and were designed to serve the following objectives: 1. Processes of the development of modern literature and its transnational dimension were studied by consistently comparing inter-cultural connections, thus underlining the status of the cultural magazine as a crucial medium of the dynamics of modernization. Within the project continuities and ruptures within these dynamics in Spanish-speaking literatures have been examined, which necessarily could only be partially considered in the prevailing epoch-centered studies on Modernismo and avant-garde so far. The high level of transnational networking, which is characteristic for the "cosmopolitan" Modernismo as well as the "international" avant-garde, was supposed to finally become the object of research, after this phase of studying magazines mostly as part of the national philologies. 2. In conducting this new field of research methods already established and theories on cultural transfer have been used to study modern literature outside the confines of national boundaries, in order to expand their reach to the medium of the cultural magazine. 3. Cultural magazines have been regarded as networks consisting of forms of texts, which do not only connect single contributors, but genres and types of texts as well. To research this aspect of magazines as networks, qualitative analytic parameters that require a close reading of carefully selected parts of the magazines have been used, as well as quantitative methods which are based on the entry of (meta-)data of reviews and their visualization. The dataset submitted here consists of explanatory texts, 16 data sheets comprising about 31,500 datasets, and of several visualizations. The project maintains its own virtual research environment named "Revistas Culturales 2.0", which is available at https://www.revistas-culturales.de/.
DOI: 10.20375/0000-000d-1d00-3
title: TOC.txt
title: Revistas culturales históricas en lengua española desde el modernismo hasta las vanguardias: procesos de modernización y formación de redes transnacionales

description: Table of Contents of this data publication