cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3886/e120083v1
title: Data and Code for: Common Ownership in America 1980-2017

description: We empirically assess the implications of the common ownership hypothesis from a historical perspective using the set of S&P 500 firms from 1980–2017. We show that the dramatic rise in common ownership in the time series is driven primarily by the rise of indexing and diversification and, in the cross–section, by investor concentration, which the theory presumes to drive a wedge between cash flow rights and control. We also show that the theory predicts incentives for expropriation of undiversified shareholders via tunneling, even in the Berle and Means (1932) world of the widely held firm.<br><br>We include additional data on scraped SEC 13f forms for 2000-2017. The rest of the data is provided or downloaded from WRDS and requires a WRDS account.
description: All Investors Filing SEC 13f forms.<br><br>We are limited to investments firms with large market capitalization to capture a superset of S&P500 components..
description: web scraping; See https://sites.google.com/view/msinkinson/research/common-ownership-data? for a full description of how data were collected.
DOI: 10.34703/gzx1-9v95/ntktst/h5dpm8
title: Miami_Beach_subsidence_1993_1999.cpg

description: :unav
DOI: 10.34703/gzx1-9v95/ntktst/zkcltr
title: Miami_Beach_subsidence_1993_1999.shp

description: :unav
DOI: 10.34703/gzx1-9v95/ntktst/huyz6l
title: Miami_Beach_subsidence_1993_1999.dbf

description: :unav
DOI: 10.34703/gzx1-9v95/ntktst/ifucjg
title: Miami_Beach_subsidence_1993_1999.prj

description: :unav
DOI: 10.34703/gzx1-9v95/ntktst/vb6and
title: Miami_Beach_subsidence_1993_1999.shx

description: :unav
DOI: 10.34703/gzx1-9v95/ntktst/atwkgm
title: Metadata.docx

description: Additional metadata
DOI: 10.34703/gzx1-9v95/ntktst/rkwxbq
title: README.pdf

description: :unav
DOI: 10.34703/gzx1-9v95/ntktst
title: Miami Beach subsidence 1993-1999, high resolution

description: The dataset consists of 5 shape files for GIS analysis. The files provide high-resolution (20 m pixels) velocity map of Miami Beach and Surfside. The dataset also include time series information for each calculated velocity point.
DOI: 10.3886/e118466
title: Data and Code for: Product Recalls and Firm Reputation

description: Product-recall data and information on stock-price reactions torecalls are used to estimate the value of reputation in a model inwhich product quality is not contractible.
DOI: 10.3886/e118466v3
title: Data and Code for: Product Recalls and Firm Reputation

description: Product-recall data and information on stock-price reactions torecalls are used to estimate the value of reputation in a model inwhich product quality is not contractible.
DOI: 10.15468/zp7w79
title: The genus Herdmania Lahille, 1888 (Tunicata, Ascidiacea) in Australian waters

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kott, Patricia (2002): The genus Herdmania Lahille, 1888 (Tunicata, Ascidiacea) in Australian waters. Zoological Journal of the Linnean Society 134 (3): 359-374, DOI: 10.1046/j.1096-3642.2002.00009.x, URL: https://academic.oup.com/zoolinnean/article-lookup/doi/10.1046/j.1096-3642.2002.00009.x
DOI: 10.6084/m9.figshare.14988078
title: Dimensions-Publication-2021-04-14_03-37-52.csv

description: Dataset of ,csv file<br>
DOI: 10.6084/m9.figshare.14988078.v1
title: Dimensions-Publication-2021-04-14_03-37-52.csv

description: Dataset of ,csv file<br>
DOI: 10.5281/zenodo.5029386
title: Supplementary Data for: Whole genome sequencing elucidates the species-wide diversity and evolution of fungicide resistance in the early blight pathogen Alternaria solani

description: Supplementary Data for: Whole genome sequencing elucidates the species-wide diversity and evolution of fungicide resistance in the early blight pathogen Alternaria solani This repository contains: SNP call data / VCF file Scripts for all processing steps from mapping up to PCA and phylogenetic analyses (script.ts)<br> Scripts for population genomic analyses with LEA and PopGenome (scripts.SE)<br> All script names are self explanatory.
DOI: 10.5281/zenodo.5029385
title: Supplementary Data for: Whole genome sequencing elucidates the species-wide diversity and evolution of fungicide resistance in the early blight pathogen Alternaria solani

description: Supplementary Data for: Whole genome sequencing elucidates the species-wide diversity and evolution of fungicide resistance in the early blight pathogen Alternaria solani This repository contains: SNP call data / VCF file Scripts for all processing steps from mapping up to PCA and phylogenetic analyses (script.ts)<br> Scripts for population genomic analyses with LEA and PopGenome (scripts.SE)<br> All script names are self explanatory.
DOI: 10.5281/zenodo.5084811
title: Dataset to submitted manuscript "Imaging the blinking properties of a mitochondrial fluorophore marker turns it into a multi-functional sensing probe"

description: <strong>This folder contains all raw data underlying the results presented in a manuscript, submitted to Light: Science & Applications, and entitled:</strong> <strong><em>Imaging the blinking properties of a mitochondrial fluorophore marker turns it into a multi-functional sensing probe</em></strong> <strong>Authored by:</strong> Zhixue Du<sup>a</sup><em>, </em>Joachim Piguet<sup>a,+</sup>, Gleb Baryshnikov<sup>b,+</sup>, Johan Tornmalm<sup>a</sup>, Baris Demirbay<sup>a</sup>, Hans Ågren<sup>b</sup>, Jerker Widengren<sup>a,*</sup> <sup>a</sup> Royal Institute of Technology (KTH), Experimental Biomolecular Physics, Dept. Applied Physics, Albanova Univ Center 106 91 Stockholm, Sweden <sup>b</sup> Royal Institute of Technology (KTH), Dept Theroretical Chemistry and Biology, Albanova Univ Center 106 91 Stockholm, Sweden <sup>+</sup> Contributed equally * Corresponding author: Email: jwideng@kth.se, Phone: +46-8-7907813 <strong>The data files are grouped into the different techniques used to generate them, and refer to the figures/tables in the manuscript where the extracted results are presented. </strong> <strong>ABSTRACT</strong> By transient state (TRAST) measurements, monitoring the average fluorescence intensity upon excitation modulation, we show that the mitochondrial localization fluorophore 10-Nonyl Acridine Orange (NAO) exhibits prominent singlet-triplet state transitions and can act as a light-induced Lewis acid forming a red-emissive doublet radical. The blinking properties resulting from these transitions can be monitored in a broadly applicable manner, and under biologically relevant conditions. By TRAST studies of NAO in small unilamellar vesicles (SUVs) we show that these blinking properties are highly environment sensitive, specifically reflecting local oxygen concentrations, redox conditions, membrane charge, fluidity and lipid compositions. In SUVs containing the phospholipid cardiolipin (CL) the NAO blinking properties depend not only on the concentration of the CL added, but also on the CL acyl chain composition. The blinking also reflects hydroxyl ion dependent transitions to and from the NAO doublet radical. This makes it possible to monitor local pH and buffering properties, from a 3D bulk buffer above the membrane, or from a 2D buffer at the membrane surface itself. Finally, by live cell TRAST imaging, we show that the fluorescence blinking properties of NAO can also be imaged in a spatially resolved manner, and that this commercially available location-specific fluorophore thereby can be turned into a multi-parametric intracellular sensing probe. This study demonstrates new possibilities for fundamental membrane studies in artificial vesicles and live cells, using existing fluorophore markers, monitoring parameters and conditions of large biological relevance, which are difficult to retrieve by other means.
DOI: 10.5281/zenodo.5084810
title: Dataset to submitted manuscript "Imaging the blinking properties of a mitochondrial fluorophore marker turns it into a multi-functional sensing probe"

description: <strong>This folder contains all raw data underlying the results presented in a manuscript, submitted to Light: Science & Applications, and entitled:</strong> <strong><em>Imaging the blinking properties of a mitochondrial fluorophore marker turns it into a multi-functional sensing probe</em></strong> <strong>Authored by:</strong> Zhixue Du<sup>a</sup><em>, </em>Joachim Piguet<sup>a,+</sup>, Gleb Baryshnikov<sup>b,+</sup>, Johan Tornmalm<sup>a</sup>, Baris Demirbay<sup>a</sup>, Hans Ågren<sup>b</sup>, Jerker Widengren<sup>a,*</sup> <sup>a</sup> Royal Institute of Technology (KTH), Experimental Biomolecular Physics, Dept. Applied Physics, Albanova Univ Center 106 91 Stockholm, Sweden <sup>b</sup> Royal Institute of Technology (KTH), Dept Theroretical Chemistry and Biology, Albanova Univ Center 106 91 Stockholm, Sweden <sup>+</sup> Contributed equally * Corresponding author: Email: jwideng@kth.se, Phone: +46-8-7907813 <strong>The data files are grouped into the different techniques used to generate them, and refer to the figures/tables in the manuscript where the extracted results are presented. </strong> <strong>ABSTRACT</strong> By transient state (TRAST) measurements, monitoring the average fluorescence intensity upon excitation modulation, we show that the mitochondrial localization fluorophore 10-Nonyl Acridine Orange (NAO) exhibits prominent singlet-triplet state transitions and can act as a light-induced Lewis acid forming a red-emissive doublet radical. The blinking properties resulting from these transitions can be monitored in a broadly applicable manner, and under biologically relevant conditions. By TRAST studies of NAO in small unilamellar vesicles (SUVs) we show that these blinking properties are highly environment sensitive, specifically reflecting local oxygen concentrations, redox conditions, membrane charge, fluidity and lipid compositions. In SUVs containing the phospholipid cardiolipin (CL) the NAO blinking properties depend not only on the concentration of the CL added, but also on the CL acyl chain composition. The blinking also reflects hydroxyl ion dependent transitions to and from the NAO doublet radical. This makes it possible to monitor local pH and buffering properties, from a 3D bulk buffer above the membrane, or from a 2D buffer at the membrane surface itself. Finally, by live cell TRAST imaging, we show that the fluorescence blinking properties of NAO can also be imaged in a spatially resolved manner, and that this commercially available location-specific fluorophore thereby can be turned into a multi-parametric intracellular sensing probe. This study demonstrates new possibilities for fundamental membrane studies in artificial vesicles and live cells, using existing fluorophore markers, monitoring parameters and conditions of large biological relevance, which are difficult to retrieve by other means.
DOI: 10.5517/ccdc.csd.cc20blqp
title: CCDC 1857232: Experimental Crystal Structure Determination

description: Related Article: Tal Ben Uliel, Eliyahu M. Farber, Hagit Aviv, Wowa Stroek, Marilena Farbinteanu, Yaakov R. Tischler, David Eisenberg|2021|Chem.Commun.|57|7015|doi:10.1039/D1CC00420D
DOI: 10.5281/zenodo.5084711
title: AB21 Probiotic and Covid19

description: Randomized Clinical Trial Assessing AB21 Probiotic in Covid19 Outpatients
description: Data is provided under Creative Commons Attribution-NonCommercial-ShareAlike 4.0 (CC BY-NC-SA 4.0).
DOI: 10.5281/zenodo.5084710
title: AB21 Probiotic and Covid19

description: Randomized Clinical Trial Assessing AB21 Probiotic in Covid19 Outpatients
description: Data is provided under Creative Commons Attribution-NonCommercial-ShareAlike 4.0 (CC BY-NC-SA 4.0).
DOI: 10.5517/ccdc.csd.cc26vtpl
title: CCDC 2051570: Experimental Crystal Structure Determination

description: Related Article: Bao-Ning Li, Jia-Jun Wang, Peng-Yan Fu, Shi-Cheng Wang, Mei Pan|2021|J.Mater.Chem.C|9|8674|doi:10.1039/D1TC01398J
DOI: 10.5517/ccdc.csd.cc26vtqm
title: CCDC 2051571: Experimental Crystal Structure Determination

description: Related Article: Bao-Ning Li, Jia-Jun Wang, Peng-Yan Fu, Shi-Cheng Wang, Mei Pan|2021|J.Mater.Chem.C|9|8674|doi:10.1039/D1TC01398J
DOI: 10.5517/ccdc.csd.cc26vtrn
title: CCDC 2051572: Experimental Crystal Structure Determination

description: Related Article: Bao-Ning Li, Jia-Jun Wang, Peng-Yan Fu, Shi-Cheng Wang, Mei Pan|2021|J.Mater.Chem.C|9|8674|doi:10.1039/D1TC01398J
DOI: 10.5517/ccdc.csd.cc26vtsp
title: CCDC 2051573: Experimental Crystal Structure Determination

description: Related Article: Bao-Ning Li, Jia-Jun Wang, Peng-Yan Fu, Shi-Cheng Wang, Mei Pan|2021|J.Mater.Chem.C|9|8674|doi:10.1039/D1TC01398J
DOI: 10.5517/ccdc.csd.cc26zcg1
title: CCDC 2054973: Experimental Crystal Structure Determination

description: Related Article: Tal Ben Uliel, Eliyahu M. Farber, Hagit Aviv, Wowa Stroek, Marilena Farbinteanu, Yaakov R. Tischler, David Eisenberg|2021|Chem.Commun.|57|7015|doi:10.1039/D1CC00420D
DOI: 10.5517/ccdc.csd.cc26zch2
title: CCDC 2054974: Experimental Crystal Structure Determination

description: Related Article: Tal Ben Uliel, Eliyahu M. Farber, Hagit Aviv, Wowa Stroek, Marilena Farbinteanu, Yaakov R. Tischler, David Eisenberg|2021|Chem.Commun.|57|7015|doi:10.1039/D1CC00420D
DOI: 10.6084/m9.figshare.14987964
title: Documents on New Designs in Historic Environment

description: Collation of published papers on New Designs in Historic Environment (NDIHE) between 1992-2020 mined from journals and conferences domiciled in 20 online databases.
DOI: 10.6084/m9.figshare.14987964.v1
title: Documents on New Designs in Historic Environment

description: Collation of published papers on New Designs in Historic Environment (NDIHE) between 1992-2020 mined from journals and conferences domiciled in 20 online databases.
DOI: 10.17861/27b3b0f1-b696-4795-9110-0ae462338994
title: Custom-Technology Single-Photon Avalanche Diode Linear Detector Array for Underwater Depth Imaging
DOI: 10.3886/e120321v8-91749
title: Global Reactions to COVID-19 on Twitter: A Labelled Dataset with Latent Topic, Sentiment and Emotion Attributes

description: This project aims to present a large dataset for researchers to discover public conversation on Twitter surrounding the COVID-19 pandemic. As strong concerns and emotions are expressed in the publicly available tweets, we annotated seventeen latent semantic attributes for each public tweet using natural language processing techniques and machine-learning based algorithms. The latent semantic attributes include: 1) ten attributes indicating the tweet’s relevance to ten detected topics, 2) five quantitative attributes indicating the degree of intensity in the valence (i.e., unpleasantness/pleasantness) and emotional intensities across four primary emotions of fear, anger, sadness and joy, and 3) two qualitative attributes indicating the sentiment category and the most dominant emotion category, respectively.
description: Twitter posts.
DOI: 10.6084/m9.figshare.12234650
title: Trend from 2001 to 2015 in the prevalence of bronchiectasis among patients hospitalized for asthma and effect of bronchiectasis on the in-hospital mortality

description: We aimed to analyze the prevalence of bronchiectasis among patients hospitalized with asthma and to assess the effect of suffering bronchiectasis on in-hospital mortality (IHM). We used the Spanish National Hospital Discharge Database from 2000 to 2015 to evaluate all admissions for asthma exacerbation as the main diagnosis, dividing them according to the presence or absence of associated bronchiectasis. We assessed time trends in the prevalence, clinical characteristics, length of hospital stay, costs, and IHM. Of 342,644 admissions for asthma, 10,377 (3.02%) had bronchiectasis. The prevalence of bronchiectasis increased from 2.16% in 2001 to 4.47% in 2015 (<i>p</i> p p p Pseudomonas (8% vs. 0.66%, <i>p</i> Aspergillus (0.93% vs. 0.15%, <i>p</i> p = 0.005) and IHM (2.07% vs. 1.2%, <i>p</i> Admissions for asthma with bronchiectasis have increased over time in Spain. In our investigation, the presence of bronchiectasis was not associated with higher IHM, but it increased the length of hospital stay and costs.
DOI: 10.6084/m9.figshare.12327905.v1
title: Current practice patterns, challenges, and educational needs of asthma care providers in the United States

description: For severe, uncontrolled asthma (SUA), a gap exists between recent scientific advances and their incorporation into clinical practice. Using a Knowledge-to-Action Framework, new knowledge can be translated into evidence-based interventions to improve outcomes. The AstraZeneca U.S. PRECISION initiative aims to apply this Framework to improve recognition and management of SUA. The study objective was to identify factors contributing to gaps in care for patients with SUA. Results from a needs assessment survey of U.S. pulmonologists and allergists/immunologists were assessed within the Knowledge-to-Action Framework to advance bench-to-bedside care. Pulmonologists and allergists/immunologists from across the United States were invited to complete a customized, quantitative severe asthma survey in person at the 2017 American Thoracic Society annual meeting or <i>via</i> the Internet. Responses were summarized descriptively, and chi-squared tests evaluated associations between variables of interest. Overall, 140 U.S. providers responded, most of whom were pulmonologists (84%). Most (60%) practiced in a community-based setting; 40% practiced at an academic medical center. Key challenges to providing care for patients with severe asthma included insurance company requirements and identification of the pathophysiology of an individual patient’s severe asthma. Traditional measures of asthma-related morbidity were ranked as highly important by significantly more respondents compared with assessment of biomarkers (<i>p</i> Survey results identified unmet needs for the identification and management of patients with SUA and opportunities to improve patient outcomes through evidence-based management of SUA, including testing for biologic eligibility and subsequent use of biologic therapies.
DOI: 10.6084/m9.figshare.12293003
title: Development of self-assessed work ability among middle-aged asthma patients—a 10 year follow-up study

description: The prevalence of asthma has been growing among working age people over the last decades. In this study, we examine the development of Work Ability Score (WAS) among middle-aged asthmatics in a longitudinal setting, in order to find risk factors for poor development. We followed the development of WAS trends during 10 years in a cohort of 529 middle-aged asthmatics, who were active in working life. Follow-up questionnaires were mailed in years 1, 2, 4, 6, 8, and 10. To study the development of WAS over time, we computed the discrete Frechet distance, which describes the similarity between the shapes of WAS curves. Sixty-eight percent of the patients’ WAS remained good or excellent throughout the follow-up period, while 24% of the patients WAS trend remained moderate. However, in 8%, the WAS was poor already in baseline and decreased further throughout the study. Using logistic regression, the moderate/poor development was associated significantly with high body mass index (BMI), pack years, adult onset asthma, physically strenuous work, number of co-morbidities, especially in psychiatric conditions, hypertension, and gastroesophageal reflux disease(GERD). When the model was adjusted for age and gender, adulthood onset of asthma and pack years lost their significance. Based on medication (high dose of inhaled corticosteroids (ICS) and second controller in use), 8% of the patients had severe asthma. In the great majority of middle-aged asthma patients WAS remained stable throughout the follow-up period. However, 8% of the patients, who had more severe asthma and multiple co-morbidities, showed significantly poorer outcomes.
DOI: 10.6084/m9.figshare.12293003.v1
title: Development of self-assessed work ability among middle-aged asthma patients—a 10 year follow-up study

description: The prevalence of asthma has been growing among working age people over the last decades. In this study, we examine the development of Work Ability Score (WAS) among middle-aged asthmatics in a longitudinal setting, in order to find risk factors for poor development. We followed the development of WAS trends during 10 years in a cohort of 529 middle-aged asthmatics, who were active in working life. Follow-up questionnaires were mailed in years 1, 2, 4, 6, 8, and 10. To study the development of WAS over time, we computed the discrete Frechet distance, which describes the similarity between the shapes of WAS curves. Sixty-eight percent of the patients’ WAS remained good or excellent throughout the follow-up period, while 24% of the patients WAS trend remained moderate. However, in 8%, the WAS was poor already in baseline and decreased further throughout the study. Using logistic regression, the moderate/poor development was associated significantly with high body mass index (BMI), pack years, adult onset asthma, physically strenuous work, number of co-morbidities, especially in psychiatric conditions, hypertension, and gastroesophageal reflux disease(GERD). When the model was adjusted for age and gender, adulthood onset of asthma and pack years lost their significance. Based on medication (high dose of inhaled corticosteroids (ICS) and second controller in use), 8% of the patients had severe asthma. In the great majority of middle-aged asthma patients WAS remained stable throughout the follow-up period. However, 8% of the patients, who had more severe asthma and multiple co-morbidities, showed significantly poorer outcomes.
DOI: 10.6084/m9.figshare.12327905
title: Current practice patterns, challenges, and educational needs of asthma care providers in the United States

description: For severe, uncontrolled asthma (SUA), a gap exists between recent scientific advances and their incorporation into clinical practice. Using a Knowledge-to-Action Framework, new knowledge can be translated into evidence-based interventions to improve outcomes. The AstraZeneca U.S. PRECISION initiative aims to apply this Framework to improve recognition and management of SUA. The study objective was to identify factors contributing to gaps in care for patients with SUA. Results from a needs assessment survey of U.S. pulmonologists and allergists/immunologists were assessed within the Knowledge-to-Action Framework to advance bench-to-bedside care. Pulmonologists and allergists/immunologists from across the United States were invited to complete a customized, quantitative severe asthma survey in person at the 2017 American Thoracic Society annual meeting or <i>via</i> the Internet. Responses were summarized descriptively, and chi-squared tests evaluated associations between variables of interest. Overall, 140 U.S. providers responded, most of whom were pulmonologists (84%). Most (60%) practiced in a community-based setting; 40% practiced at an academic medical center. Key challenges to providing care for patients with severe asthma included insurance company requirements and identification of the pathophysiology of an individual patient’s severe asthma. Traditional measures of asthma-related morbidity were ranked as highly important by significantly more respondents compared with assessment of biomarkers (<i>p</i> Survey results identified unmet needs for the identification and management of patients with SUA and opportunities to improve patient outcomes through evidence-based management of SUA, including testing for biologic eligibility and subsequent use of biologic therapies.
DOI: 10.6084/m9.figshare.14906373.v2
title: NH3 raman

description: Quantative Raman spectra of ammonia under elevated temperature for combustion research applications
DOI: 10.25386/genetics.14920347
title: Supplemental Material for Rana et al., 2021

description: Supplemental Data for Precise Measurement of the Fitness Effects of Spontaneous Mutations by Droplet Digital PCR in <i>Burkholderia cenocepacia. </i><i><br></i>Includes supporting information, Figure S1-S5, Table S1-S9.