cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/2n7xpp58kr
title: Statistical dataset from an inventory of slime moulds (Eumycetozoa) in two forest nature reserves of the Masurian Lakeland, north‑eastern Poland

description: This dataset contains statistical summaries from an inventory of slime moulds (Eumycetozoa) on tree‑linked and litter‑type substrates in two forest nature reserves of the Masurian Lakeland in north‑eastern Poland. It brings together substrate‑level diversity metrics, species incidence totals, summaries of richness and diversity by ecological substrate class, a simple model relating richness to a laboratory‑derived pH gradient and ordination scores from a non‑metric multidimensional scaling analysis of community composition.

Supplementary Material 1.1 provides substrate‑level alpha‑diversity metrics and species incidence totals. For each substrate code it reports species richness, Shannon diversity, the Gini–Simpson index and Pielou’s evenness, together with associated metadata on host tree, substrate material, ecological substrate class and, where available, mean pH of moist‑chamber soaking water. A second table lists every recorded taxon and its total number of collections across both reserves and all substrates.

Supplementary Material 1.2 summarises richness and diversity by ecological substrate class and documents an exploratory non‑parametric comparison between lignicolous and non‑lignicolous substrates. One table gives, for each substrate class, the number of substrate codes and the mean and standard deviation of richness, Shannon diversity, Gini–Simpson index and evenness. A second table reports the Wilcoxon rank‑sum statistic, p‑value and test specification for the comparison of richness between lignicolous and other substrates.

Supplementary Material 1.3 contains parameter estimates from a univariate Gaussian linear model describing species richness as a function of mean substrate pH. Mean pH is represented as a categorical predictor with levels corresponding to the distinct pH values measured in moist‑chamber soaking water. The table lists, for the intercept and each pH level, the estimated coefficient, standard error, test statistic and p‑value.

Supplementary Material 1.4 provides ordination scores for all substrate codes from a two‑dimensional non‑metric multidimensional scaling analysis based on Bray–Curtis dissimilarities of presence–absence data. For each substrate code the table reports NMDS coordinates on two axes together with metadata on host tree, substrate description, mean pH where available, tree and material codes and ecological substrate class, allowing reconstruction and ecological interpretation of the ordination.
DOI: 10.17632/2n7xpp58kr.1
title: Statistical dataset from an inventory of slime moulds (Eumycetozoa) in two forest nature reserves of the Masurian Lakeland, north‑eastern Poland

description: This dataset contains statistical summaries from an inventory of slime moulds (Eumycetozoa) on tree‑linked and litter‑type substrates in two forest nature reserves of the Masurian Lakeland in north‑eastern Poland. It brings together substrate‑level diversity metrics, species incidence totals, summaries of richness and diversity by ecological substrate class, a simple model relating richness to a laboratory‑derived pH gradient and ordination scores from a non‑metric multidimensional scaling analysis of community composition.

Supplementary Material 1.1 provides substrate‑level alpha‑diversity metrics and species incidence totals. For each substrate code it reports species richness, Shannon diversity, the Gini–Simpson index and Pielou’s evenness, together with associated metadata on host tree, substrate material, ecological substrate class and, where available, mean pH of moist‑chamber soaking water. A second table lists every recorded taxon and its total number of collections across both reserves and all substrates.

Supplementary Material 1.2 summarises richness and diversity by ecological substrate class and documents an exploratory non‑parametric comparison between lignicolous and non‑lignicolous substrates. One table gives, for each substrate class, the number of substrate codes and the mean and standard deviation of richness, Shannon diversity, Gini–Simpson index and evenness. A second table reports the Wilcoxon rank‑sum statistic, p‑value and test specification for the comparison of richness between lignicolous and other substrates.

Supplementary Material 1.3 contains parameter estimates from a univariate Gaussian linear model describing species richness as a function of mean substrate pH. Mean pH is represented as a categorical predictor with levels corresponding to the distinct pH values measured in moist‑chamber soaking water. The table lists, for the intercept and each pH level, the estimated coefficient, standard error, test statistic and p‑value.

Supplementary Material 1.4 provides ordination scores for all substrate codes from a two‑dimensional non‑metric multidimensional scaling analysis based on Bray–Curtis dissimilarities of presence–absence data. For each substrate code the table reports NMDS coordinates on two axes together with metadata on host tree, substrate description, mean pH where available, tree and material codes and ecological substrate class, allowing reconstruction and ecological interpretation of the ordination.
DOI: 10.17632/h5fwm9nc2c
title: The Environmental Administrative Penalties and Firm Digital Transformation: A Reexamination of Porter Hypothesis

description: This is the STATA data set and STATA code for empirical part of The Environmental Administrative Penalties and Firm Digital Transformation: A Reexamination of Porter Hypothesis
DOI: 10.17632/h5fwm9nc2c.5
title: The Environmental Administrative Penalties and Firm Digital Transformation: A Reexamination of Porter Hypothesis

description: This is the STATA data set and STATA code for empirical part of The Environmental Administrative Penalties and Firm Digital Transformation: A Reexamination of Porter Hypothesis
DOI: 10.17632/jbzt2b4m3v
title: Organic amendments decouple soil carbon stabilization from macroaggregates by enhancing microscale protection
DOI: 10.17632/jbzt2b4m3v.1
title: Organic amendments decouple soil carbon stabilization from macroaggregates by enhancing microscale protection
DOI: 10.17632/jhvc5bs55n
title: Supplementary file for "Chemical constituents from Kibatalia maingayi (Apocynaceae) and its chemotaxonomic significance"

description: The presented NMR and high-resolution MS spectra are supplementary file for "Chemical constituents from Kibatalia maingayi (Apocynaceae) and its chemotaxonomic significance". This dataset was analyzed to identify the compounds present in the dichloromethane extract of Kibatalia maingayi stem bark. Seven compounds were isolated, including tryptanthrin (Figures S1-S5), N-benzoyl-L-phenylalaninol (Figures S6-S10), N-benzoyl-L-phenylalanine methyl ester (Figures S11-S15), asperglaucide (Figures S16-S20), aurantiamide (Figures S21-S25), asperphenamate (Figures S26-S30), and pinoresinol (Figures S31-S35).
DOI: 10.17632/jhvc5bs55n.2
title: Supplementary file for "Chemical constituents from Kibatalia maingayi (Apocynaceae) and its chemotaxonomic significance"

description: The presented NMR and high-resolution MS spectra are supplementary file for "Chemical constituents from Kibatalia maingayi (Apocynaceae) and its chemotaxonomic significance". This dataset was analyzed to identify the compounds present in the dichloromethane extract of Kibatalia maingayi stem bark. Seven compounds were isolated, including tryptanthrin (Figures S1-S5), N-benzoyl-L-phenylalaninol (Figures S6-S10), N-benzoyl-L-phenylalanine methyl ester (Figures S11-S15), asperglaucide (Figures S16-S20), aurantiamide (Figures S21-S25), asperphenamate (Figures S26-S30), and pinoresinol (Figures S31-S35).
DOI: 10.17632/9kvv7bv25m.5
title: Food Restriction Patterns and Their Impact on Growth and Nutrition in Chinese Pediatric Atopic Dermatitis: A Cross-Sectional Study

description: Supplemental material for "Food Restriction Patterns and Their Impact on Growth and Nutrition in Chinese
Pediatric Atopic Dermatitis: A Cross-Sectional Study"
DOI: 10.17632/dwwjj73ff9
title: Cortical bone fenestration with a Beaver scalpel blade to promote second intention healing of Mohs surgery scalp wounds

description: Supplemental surgical procedure video, cortical bone fenestration
DOI: 10.17632/dwwjj73ff9.1
title: Cortical bone fenestration with a Beaver scalpel blade to promote second intention healing of Mohs surgery scalp wounds

description: Supplemental surgical procedure video, cortical bone fenestration
DOI: 10.17632/y83nb2g5jt
title: Lactylation-driven nuclear RIG-I promoted by lactate transporter inhibitor suppresses DNA damage repair through inhibiting PARP1 activity

description: In the present study, we reveal that lactylation regulates the nuclear translocation and function of RIG-I (DDX58) in lung adenocarcinoma (LUAD). We demonstrate that the acetyltransferase PCAF mediates RIG-I lactylation, while inhibition of lactate efflux by syrosingopine increases intracellular lactate levels, thereby promoting RIG-I lactylation and importin8-dependent nuclear translocation. Nuclear RIG-I interacts with PARP1 and suppresses its activity, leading to impaired DNA damage repair. Furthermore, syrosingopine treatment enhances the sensitivity of LUAD cells to PARP inhibitors and improves the therapeutic efficacy of olaparib in vivo.
This dataset contains the raw Western blot (WB) data supporting our findings on RIG-I lactylation, nuclear localization, and its regulatory role in DNA damage repair.
DOI: 10.17632/y83nb2g5jt.1
title: Lactylation-driven nuclear RIG-I promoted by lactate transporter inhibitor suppresses DNA damage repair through inhibiting PARP1 activity

description: In the present study, we reveal that lactylation regulates the nuclear translocation and function of RIG-I (DDX58) in lung adenocarcinoma (LUAD). We demonstrate that the acetyltransferase PCAF mediates RIG-I lactylation, while inhibition of lactate efflux by syrosingopine increases intracellular lactate levels, thereby promoting RIG-I lactylation and importin8-dependent nuclear translocation. Nuclear RIG-I interacts with PARP1 and suppresses its activity, leading to impaired DNA damage repair. Furthermore, syrosingopine treatment enhances the sensitivity of LUAD cells to PARP inhibitors and improves the therapeutic efficacy of olaparib in vivo.
This dataset contains the raw Western blot (WB) data supporting our findings on RIG-I lactylation, nuclear localization, and its regulatory role in DNA damage repair.
DOI: 10.17632/ps2kbym483
title: Radiographic analysis and prevalence of two classifications of impacted mandibular third molars in patients treated at the Dr. Rene Puig Benz UNPHU dental clinic, January 2024 to December 2024.

description: In the composition of the dental formula, the permanent dentition is present in the most distal
area of both jaws, where the third molar is located. Given its anatomical location and
relationship to the growth and development of the jaws, it can show positional abnormalities
that affect the eruption process. This study is cross-sectional, retrospective, and descriptive.
Conducted at the Dr. Rene Puig Bentz dental clinic, it determined the radiographic analysis of
two classifications of impacted mandibular third molars in patients aged 16 to 40 years with
the help of 622 panoramic radiographs. The statistical data obtained during the research were
entered into the Microsoft spreadsheet for Windows 2019 Microsoft Excel. It (72.9%) occurred
in younger patients aged 16-20 years, where retention of molar 4.8 predominated. (45.5%)

occurred in patients aged 21-40 years, while the proportion of non-retained and absent molars
increased with age. In this group, molar 3.8 showed the highest retention rate. (44.8%)
occurred in non-retained molars, most frequently in molar 3.8. By gender, 60.3% occurred in
females, mostly in molar 4.8. 44.9% occurred in the category of non-retained molars in both
genders, followed by retained molars (32.1%), with very similar proportions between males
and females. In molar 3.8, the retained condition predominated in both sexes (44.1%), with a
slightly higher frequency in males (45.4%) than in females (43.3%). Missing molars showed a
lower percentage than the previous ones (around 22%) with no marked differences between
sexes. According to Winter's classification, with a (60.3%) differentiation by sex, most cases
correspond to females in molar 4.8. the most frequent positions were mesioangular (38.3%)
and vertical (30.7%), with a lower percentage than the previous categories: horizontal (6.3%),
distoangular (1.4%), and inverted (0.2%). In molar 3.8, the mesioangular position
predominates (40.2%), followed by the vertical (28.0%) and distoangular (22.5%) positions,
while the horizontal (1.1%) and inverted (8.2%) positions were rare.Conclusion: The study
determined the frequency and most common positions of impacted third molars in patients
using the Winter and Pell & Gregory classifications, and found that the most frequent position
according to Winter is mesioangular and vertical, and according to Pell & Gregory Class I -
Level A, which were more prevalent and associated with less surgical complexity. The age
group with the highest retention was 17 to 20 years, with young adults being the most
affected. The molar with the highest retention was 4.8 (57%) compared to 3.8 (43%), and
although more women were evaluated, no significant differences were found by gender.
DOI: 10.17632/ps2kbym483.1
title: Radiographic analysis and prevalence of two classifications of impacted mandibular third molars in patients treated at the Dr. Rene Puig Benz UNPHU dental clinic, January 2024 to December 2024.

description: In the composition of the dental formula, the permanent dentition is present in the most distal
area of both jaws, where the third molar is located. Given its anatomical location and
relationship to the growth and development of the jaws, it can show positional abnormalities
that affect the eruption process. This study is cross-sectional, retrospective, and descriptive.
Conducted at the Dr. Rene Puig Bentz dental clinic, it determined the radiographic analysis of
two classifications of impacted mandibular third molars in patients aged 16 to 40 years with
the help of 622 panoramic radiographs. The statistical data obtained during the research were
entered into the Microsoft spreadsheet for Windows 2019 Microsoft Excel. It (72.9%) occurred
in younger patients aged 16-20 years, where retention of molar 4.8 predominated. (45.5%)

occurred in patients aged 21-40 years, while the proportion of non-retained and absent molars
increased with age. In this group, molar 3.8 showed the highest retention rate. (44.8%)
occurred in non-retained molars, most frequently in molar 3.8. By gender, 60.3% occurred in
females, mostly in molar 4.8. 44.9% occurred in the category of non-retained molars in both
genders, followed by retained molars (32.1%), with very similar proportions between males
and females. In molar 3.8, the retained condition predominated in both sexes (44.1%), with a
slightly higher frequency in males (45.4%) than in females (43.3%). Missing molars showed a
lower percentage than the previous ones (around 22%) with no marked differences between
sexes. According to Winter's classification, with a (60.3%) differentiation by sex, most cases
correspond to females in molar 4.8. the most frequent positions were mesioangular (38.3%)
and vertical (30.7%), with a lower percentage than the previous categories: horizontal (6.3%),
distoangular (1.4%), and inverted (0.2%). In molar 3.8, the mesioangular position
predominates (40.2%), followed by the vertical (28.0%) and distoangular (22.5%) positions,
while the horizontal (1.1%) and inverted (8.2%) positions were rare.Conclusion: The study
determined the frequency and most common positions of impacted third molars in patients
using the Winter and Pell & Gregory classifications, and found that the most frequent position
according to Winter is mesioangular and vertical, and according to Pell & Gregory Class I -
Level A, which were more prevalent and associated with less surgical complexity. The age
group with the highest retention was 17 to 20 years, with young adults being the most
affected. The molar with the highest retention was 4.8 (57%) compared to 3.8 (43%), and
although more women were evaluated, no significant differences were found by gender.
DOI: 10.15468/dl.xj49pg
title: Occurrence Download

description: A dataset containing 13108107 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is North America",
 "Country is Mexico",
 "DatasetKey is one of (EOD – eBird Observation Dataset, iNaturalist Research-grade Observations, Birda - Global Observation Dataset)",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2020-2025"
 ]
}

 The dataset includes 13108107 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046078-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rwkbub
title: Occurrence Download

description: A dataset containing 167275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Felis catus",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 167275 records from 542 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046079-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/myhw9rcjp3.3
title: 3D ECG: J-wave groups dataset

description: Dataset containing the patient-specific time windows, 2D/3D ECG figures, processing code used to classify J-wave phenotypes, and the patient-by-patient V6 morphology and its transformation under 3D rotation.
DOI: 10.17632/pn8zym54pz.1
title: Do Pseudosequences Matter in Neoantigen Prediction?

description: All pseudosequences and embeddings used in the paper "Do Pseudosequences Matter in Neoantigen Prediction?"

All code is freely available at https://github.com/KarchinLab/Do-Pseudoseqs-Matter

--------------------------------------------------------------------------------
FILE NAMES

The following are one-hot encoded pseudosequences, with each row representing an allele and each column representing the amino acid present at a given position. Each entry is either 0 or 1 to indicate whether that residue appears at that position.

Original_BigMHC_Pseudosequences.csv
Original_NetMHCpan-4.1_Pseudosequences.csv
Random_Pseudosequences.csv

BigMHC_Pseudosequences_Length_5.csv
BigMHC_Pseudosequences_Length_10.csv
BigMHC_Pseudosequences_Length_15.csv
BigMHC_Pseudosequences_Length_20.csv
BigMHC_Pseudosequences_Length_25.csv
BigMHC_Pseudosequences_Length_35.csv
BigMHC_Pseudosequences_Length_50.csv
BigMHC_Pseudosequences_Length_80.csv
BigMHC_Pseudosequences_Length_100.csv

The following are embeddings generated by ESM-2 and node2vec. Each row corresponds to an allele, and each column represents a dimension of the embedding space. The entries are floating-point values. 

BigMHC_ESM2_Embeddings.csv: ESM-2_Embeddings of the original BigMHC pseudosequences
NetMHCpan-4.1_ESM2_Embeddings.csv: ESM-2 embeddings of the original NetMHCpan-4.1 pseudosequences
Annotation_Based_Embeddings.csv: Graph-derived allele embeddings constructed using shared P-groups, supertypes, and allele nomenclature.

A complete set of files is provided in a single ZIP file:
All pseudosequences and embeddings.zip

The following are raw prediction scores described in the paper:
all_lengths.xlsx
all_models.xlsx
DOI: 10.17632/vhxsvxym7m
title: Formación y salud vocal del docente

description: Datos asociados al proyecto de investigación “La voz del docente”
DOI: 10.17632/vhxsvxym7m.2
title: Formación y salud vocal del docente

description: Datos asociados al proyecto de investigación “La voz del docente”
DOI: 10.15468/dl.5mruqq
title: Occurrence Download

description: A dataset containing 1883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Laonome kroyeri",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1883 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046098-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/58nhzhv5th
title: Agro dealers in the smallholder farming sector in Zambia

description: The data was collected from smallholder farmers in central Zambia. It focuses on their use of agrodealers for buying agricultural inputs and selling produce. It highlights the forward and backward linkages between agrodealers and the smallholder farming sector in Zambia
DOI: 10.17632/58nhzhv5th.1
title: Agro dealers in the smallholder farming sector in Zambia

description: The data was collected from smallholder farmers in central Zambia. It focuses on their use of agrodealers for buying agricultural inputs and selling produce. It highlights the forward and backward linkages between agrodealers and the smallholder farming sector in Zambia
DOI: 10.17632/684py6kjgv
title: Dataset for miR-499 rs3746444 Genotyping in Breast Cancer Patients and Controls from Kerman, Iran
DOI: 10.15468/dl.r7cr64
title: Occurrence Download

description: A dataset containing 5666820 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is one of (Dumetella carolinensis)",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 1951",
 "Year is less than or equal to 2024",
 "Month is greater than or equal to April",
 "Month is less than or equal to July",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 5666820 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046082-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/684py6kjgv.1
title: Dataset for miR-499 rs3746444 Genotyping in Breast Cancer Patients and Controls from Kerman, Iran
DOI: 10.17632/3ycm6hzpjs
title: Runx1 Promotes Myofibroblast Cell Fate during Development and Fibrosis

description: Supplemental methods.
Supplemental table 1. List of 258 DEGs which are potential direct Runx1 targets.
DOI: 10.17632/3ycm6hzpjs.2
title: Runx1 Promotes Myofibroblast Cell Fate during Development and Fibrosis

description: Supplemental methods.
Supplemental table 1. List of 258 DEGs which are potential direct Runx1 targets.
DOI: 10.17632/f5vvc9v4rz
title: Robust H∞ Control with D-Stability via Static Output Feedback for Nonlinear Active Suspension Systems – Models, Parameters, and Measurement Data

description: This dataset contains all the necessary materials to reproduce the results presented in the paper "Robust H∞ Control with D-Stability via Static Output Feedback for Nonlinear Active Suspension Systems". 

Simulation and LMIs codes for static output feedback design of nonlinear systems. The LMIs are solved with MATLAB toolboxes, SDPT3, and Yalmip.

It includes:
- Matlab/Simulink® models used for simulation and controller implementation;
- Parameter values for the physical Active Suspension system;
- Experimental measurement data collected during closed-loop tests.