cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3665698_d1.v1
title: MOESM4 of Simultaneous analyses of N-linked and O-linked glycans of ovarian cancer cells using solid-phase chemoenzymatic method

description: Additional file 4: Table S4. Â Regulation of O-glycans by O-GalNAc inhibitors (BAG) on OVCAR-3 cells. N = HexNAc, H = Hexose, F = fucose, S = Sialic acid. The relative abundance is calculated by normalization using total intensity.
DOI: 10.6084/m9.figshare.c.3665698_d1
title: MOESM4 of Simultaneous analyses of N-linked and O-linked glycans of ovarian cancer cells using solid-phase chemoenzymatic method

description: Additional file 4: Table S4. Â Regulation of O-glycans by O-GalNAc inhibitors (BAG) on OVCAR-3 cells. N = HexNAc, H = Hexose, F = fucose, S = Sialic acid. The relative abundance is calculated by normalization using total intensity.
DOI: 10.6084/m9.figshare.c.3663541_d2.v1
title: Additional file 2: of The cut-off value of tumor size and appropriate timing of follow-up for management of minimal EUS-suspected gastric gastrointestinal stromal tumors

description: Clinicopathological features of all the PD GISTs. It contains data on clinicopathological features of patients with progressive disease (PD). (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3663541_d1.v1
title: Additional file 1: of The cut-off value of tumor size and appropriate timing of follow-up for management of minimal EUS-suspected gastric gastrointestinal stromal tumors

description: Characteristics of all the GISTs. This supplementary file includes clinical parameters of all patients. (XLSX 20Â kb)
DOI: 10.6084/m9.figshare.c.3663541_d2
title: Additional file 2: of The cut-off value of tumor size and appropriate timing of follow-up for management of minimal EUS-suspected gastric gastrointestinal stromal tumors

description: Clinicopathological features of all the PD GISTs. It contains data on clinicopathological features of patients with progressive disease (PD). (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3663541_d1
title: Additional file 1: of The cut-off value of tumor size and appropriate timing of follow-up for management of minimal EUS-suspected gastric gastrointestinal stromal tumors

description: Characteristics of all the GISTs. This supplementary file includes clinical parameters of all patients. (XLSX 20Â kb)
DOI: 10.15468/dl.gd7vsu
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argyropelecus olfersii (Cuvier, 1829)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 106 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038224-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.znnkz8
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "Geometry POLYGON((-73.5607 11.26675,-73.73278 11.76734,-74.41588 11.4649,-74.23859 11.16246,-73.5607 11.26675))",
 "TaxonKey is one of (Characiformes)"
 ]
 }
 ]
}

 The dataset includes 34 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038223-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3605084_d3.v1
title: Additional file 13: of Comprehensive characterization of a time-course transcriptional response induced by autotoxins in Panax ginseng using RNA-Seq

description: The differentially expressed genes across all the time points. (XLS 66Â kb)
DOI: 10.6084/m9.figshare.c.3604985_d10.v1
title: Additional file 6: Table S5. of Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize

description: Joint linkage analysis summary for days to tasseling trait in CN-NAM and US-NAM, respectively. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3605027_d2.v1
title: Additional file 1: of Members of WRKY Group III transcription factors are important in TYLCV defense signaling pathway in tomato (Solanum lycopersicum)

description: Table S1. WRKY transcription factors name in rice, Arabidopsis, and tomato. Red color in tomato represented the SolyWRKY Group III TFs. Table S2. The orthologous WRKY genes in tomato, Arabidopsis, and rice. Red represented the orthologous genes of Group III genes responded to TYLCV infection in tomato. Table S3. The paralogous WRKY genes in tomato, Arabidopsis, and rice. Red represented the paralogous genes of Group III genes responded to TYLCV infection in tomato. (XLS 48Â kb)
DOI: 10.6084/m9.figshare.c.3604985_d9.v1
title: Additional file 10: Table S8. of Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize

description: Phenotypic data for days to tasseling in five environments for the US-NAM population. (XLSX 179 kb)
DOI: 10.6084/m9.figshare.c.3604985_d7.v1
title: Additional file 2: Table S2. of Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize

description: Recombination bin map information within the 36 families of the two NAM populations, based on high-quality SNPs obtained from population sequencing. (XLSX 4828 kb)
DOI: 10.6084/m9.figshare.c.3604985_d8.v1
title: Additional file 9: Table S7. of Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize

description: Phenotypic data for days to tasseling in six environments for the CN-NAM population. (XLSX 193 kb)
DOI: 10.6084/m9.figshare.c.3605009_d2.v1
title: Additional file 2: Table S1. of Three-dimensional poly-(ε-caprolactone) nanofibrous scaffolds directly promote the cardiomyocyte differentiation of murine-induced pluripotent stem cells through Wnt/β-catenin signaling

description: Primers and cycling conditions for RT-PCR. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3604985_d4.v1
title: Additional file 8: Table S6. of Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize

description: Information about joint recombination bin maps for the combined CN-NAM and US-NAM populations. (XLSX 411 kb)
DOI: 10.6084/m9.figshare.c.3604985_d2.v1
title: Additional file 1: Table S1. of Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize

description: Summary of population size, recombination event number, and genetic map information within the 36 RIL families of the two NAM populations. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3604985_d3.v1
title: Additional file 5: Table S4. of Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize

description: QTLs identified for days to tasseling trait within the 36 families of the two NAM populations. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3604985_d1.v1
title: Additional file 4: Table S3. of Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize

description: Joint recombination bin map information for CN-NAM and US-NAM, respectively. (XLSX 638 kb)
DOI: 10.15468/dl.w2nkpr
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argyropelecus sladeni Regan, 1908",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 103 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038225-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/10230902
title: WallStreetBets 2022
DOI: 10.6084/m9.figshare.c.3598013_d2.v1
title: Additional file 2: of Continual reassessment method for dose escalation clinical trials in oncology: a comparison of prior skeleton approaches using AZD3514 data

description: Final dose toxicity curves and 95 % prediction intervals for every CRM method + 10 percentage points. Legend: The predicted probabilities of experiencing a DLT and corresponding 95 % prediction intervals for each prior skeleton + 10 % approach used in the extended CRM method after the MTD has been determined for the AZD3514 data. (ZIP 678 kb)
DOI: 10.6084/m9.figshare.c.3597995_d3.v1
title: Additional file 5: Figure S3. of Integrated analyses of zebrafish miRNA and mRNA expression profiles identify miR-29b and miR-223 as potential regulators of optic nerve regeneration

description: Top gene network of under-expressed genes. IPA gene network diagram of under-expressed gene set. The enriched networks are associated with functions involved in Neurological Disease, Nervous System Development and Function, and Organ Morphology, with a network score of 45. (TIFF 730Â kb)
DOI: 10.15468/dl.dhszwf
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argyrosomus regius (Asso, 1801)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 41 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038226-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598007_d7.v1
title: Additional file 1: of Genome survey of pistachio (Pistacia vera L.) by next generation sequencing: Development of novel SSR markers and genetic diversity in Pistacia species

description: The SSR sequences, accession numbers, forward and reverse primers, repeat motif, repeat type, and product sizes of 204 novel SSR loci developed from Pistacia vera L. ‘Siirt’. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.c.3597995_d5.v1
title: Additional file 6: Table S3. of Integrated analyses of zebrafish miRNA and mRNA expression profiles identify miR-29b and miR-223 as potential regulators of optic nerve regeneration

description: Unfiltered enriched GO terms associated with miR-29b predicted target genes sourced from Targetscan Fish database. Table contains each GO category and p-value. (XLS 21Â kb)
DOI: 10.6084/m9.figshare.c.3598022_d3.v1
title: Additional file 9: Model S9. of Living on the edge: substrate competition explains loss of robustness in mitochondrial fatty-acid oxidation disorders

description: Human-liver fatty acid beta-oxidation competition. (XML 536Â kb)
DOI: 10.6084/m9.figshare.c.3597995_d6.v1
title: Additional file 4: Figure S2. of Integrated analyses of zebrafish miRNA and mRNA expression profiles identify miR-29b and miR-223 as potential regulators of optic nerve regeneration

description: Top gene network of over-expressed genes. Top scoring IPA gene network diagram of over-expressed gene set. The enriched networks are associated with functions involved in Dermatological Diseases and Conditions, Developmental Disorder, and Hereditary Disorders, with a network score of 49. (TIFF 561Â kb)
DOI: 10.6084/m9.figshare.c.3600764_d6.v1
title: Additional file 9: Table E5. of Meta-analysis derived atopic dermatitis (MADAD) transcriptome defines a robust AD signature highlighting the involvement of atherosclerosis and lipid metabolism pathways

description: Khattri 2014 (GSE58558) – Ingenuity Pathway Analysis. (XLSX 26 kb)
DOI: 10.6084/m9.figshare.c.3600809_d1.v1
title: Additional file 9: of Phylogenetic approaches to microbial community classification

description: Top ten group features. Taxonomic and functional features with Spearman correlationâ  &gt;â  0.5 are grouped together. (XLSX 48 kb)
DOI: 10.6084/m9.figshare.c.3600764_d7.v1
title: Additional file 16: Table E11. of Meta-analysis derived atopic dermatitis (MADAD) transcriptome defines a robust AD signature highlighting the involvement of atherosclerosis and lipid metabolism pathways

description: BH adjusted p-values WGCNA LS Modules. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3600809_d5.v1
title: Additional file 3: of Phylogenetic approaches to microbial community classification

description: Script to produce clade abundance features. (ZIP 788 kb)
DOI: 10.6084/m9.figshare.c.3600764_d8.v1
title: Additional file 12: Table E7. of Meta-analysis derived atopic dermatitis (MADAD) transcriptome defines a robust AD signature highlighting the involvement of atherosclerosis and lipid metabolism pathways

description: Overrepresented Hub30 Genes and module names. (LS) (XLSX 38Â kb)
DOI: 10.6084/m9.figshare.c.3600809_d6.v1
title: Additional file 6: of Phylogenetic approaches to microbial community classification

description: Clade counts raw dataset. (TXT 9,214 kb)
DOI: 10.6084/m9.figshare.5281099.v11
title: NBN Speedtest on Kogan | Telecube: Telecube HFC 50/20(Aug 17),100/40 (May 18), Kogan (100/20 Oct 2021) in Hughesdale Vic 3166

description: A speedtest of NBN speeds was run across a weekend, every two hours, from Friday 8.00pm to Monday 8.00am. NBN was running in Hughesdale, 3166 Victoria over Telecube HFC 50/20mbps NBN subscription. The NBN is the Australian National Broadband Network. HFC is the payTV network (a hybrid fibre-coaxial network) and is currently sold at speeds up to 100/40 mbps (download/upload). The test is run on a residential premise with a 50/20mbps subscription with Telecube. Where mbps is megabits per second, and 50/20 is 50mbps download and 20mbps upload.<br>Now includes updated to NBN Telecube HFC 100/40 last week. Rerun test. Friday 8.00pm to Monday 8.00am (18-20 May 2018). Using same procedure.<br><br>Speedtest is a network service to test an internet connection speed. See html5 version at http://beta.speedtest.net.<br><br>Speedtest recorded from server: 2225 Telstra Melbourne.List of servers available by running: speedtest-cli --listRecommend: run speedtest against a single server to remove server speed variability. See http://whrl.pl/ReX2rn for server variability impact on speedtest.<br>Version:9. Add Kogan to front of dataset title8. Adding Speedtest data for a new ISP - Kogan 100/20 plan (Oct 2021). Across a weekend and testing earlier noted speedtest servers not continuously available - hence used with nearest ping. Added Kogan Plot.5. More data on 100/40 upgrade plan. File data200518new.csv added. New plot: Plotly:/50. New jpg. Plot200518.4. More data from 280817 - added every 15mins. File: data280817.csv. New plot: Plotly:/48. New jpg. Plot280817.3. Added play2.csv tidied file including parsed date/time, where DayHr = Day.Hr and DayHr2 = Day.Hr*4 *i.e. close to per cent.2. Out.csv deletes test data.1. Out.csv includes 12 lines of test data from Monash Uni LAN (speeds 200/100mbps). Now deleted in v2..<br>Recording:- upload (mbps)- download (mbps)- ping (milliseconds)and output to a csv file.<br>Code from: Github to run speedtest under python control. https://github.com/sivel/speedtest-cli (linked below).<br>Bash script executes speedtest. (Bash file attached here.)Cron controls automated execution of script and write out data to csv file. (out.csv).Further coding docs included in bash file: job.sh<br>Inspired by: https://forums.cacti.net/viewtopic.php?f=12&t=52732 <br>Cron: 5 */2 * * * cd ~/Downloads/speed/ && ./job.shRuns speedtest every two hours at five minutes past the hour.<br>Environment: MacBook Pro 2012 10.12.6 Python 2.7.10 (MacOS)<br>Data graphed (and data available) at plotly: https://plot.ly/~areff20000/46/ (linked below).<br>
DOI: 10.6084/m9.figshare.c.3602921_d3.v1
title: Additional file 7: Table S6. of Genetic basis of nitrogen use efficiency and yield stability across environments in winter rapeseed

description: Results of the linkage analyses for the DH populations for each trial × N × trait combination. (XLSX 38 kb)
DOI: 10.6084/m9.figshare.c.3602933_d1.v1
title: Additional file 1: Table S1. of Are females more variable than males in gene expression? Meta-analysis of microarray datasets

description: A list of microarray databases analyzed in the present study. Sample number indicates the number of independent replicate tissues or animals.
DOI: 10.6084/m9.figshare.c.3602921_d4.v1
title: Additional file 4: Table S4. of Genetic basis of nitrogen use efficiency and yield stability across environments in winter rapeseed

description: Results of the mixed linear models applied to each population × trial combination (models (3) and (4)). (XLSX 22 kb)
DOI: 10.6084/m9.figshare.c.3602921_d5.v1
title: Additional file 6: Table S6. of Genetic basis of nitrogen use efficiency and yield stability across environments in winter rapeseed

description: Results of the GWAS for the WOSR populations for each trial × N × trait combination. (XLSX 150 kb)
DOI: 10.15468/dl.s4mcd2
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ariomma bondi Fowler, 1930",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 39 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038227-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3602942_d1.v1
title: Additional file 2: of Development of a prognostic model based on demographic, environmental and lifestyle information for predicting incidences of symptomatic respiratory or gastrointestinal infection in adult office workers

description: Raw data on the relationships between designated risk factors and occurrence of infections. Distribution of weeks with reported exposures to GTI or RTI, and of weeks with reported symptoms of gastrointestinal infection (GTI) or respiratory tract infection (RTI), among subgroups generated according to the answers to the questionnaire. (XLSX 32 kb)
DOI: 10.6084/m9.figshare.c.3602921_d7.v1
title: Additional file 3: Table S3. of Genetic basis of nitrogen use efficiency and yield stability across environments in winter rapeseed

description: Trial designs and crop management strategies. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3604820_d5.v1
title: MOESM8 of A cancer cell-line titration series for evaluating somatic classification

description: Additional file 8: Table S5. A listing of commands and parameters as well as other notes regarding how the analysis tools were run can be found in this supplemental Excel document.
DOI: 10.6084/m9.figshare.c.3604820_d6.v1
title: MOESM7 of A cancer cell-line titration series for evaluating somatic classification

description: Additional file 7: Table S4. Performance for each MuTect or Strelka based pipeline, as well as the performance of every possible intersection or union of those pipelines, is listed in this supplemental Excel document. Each pipeline is represented by a three letter code: a b or n for the aligner (BWA or Novoalign), a g or r for read processing steps (GATK realignment/recalibration or â  rawâ   for no processing) and an m or s for caller (MuTect or Strelka).
DOI: 10.6084/m9.figshare.c.3604808_d7.v1
title: MOESM2 of New insights into the heterogeneity of Th17 subsets contributing to HIV-1 persistence during antiretroviral therapy

description: Additional file 2. Genome-wide transcriptional profiling of the newly identified CCR6+DN and CCR6+DP subsets relative to the previously characterized Th17/CCR4+CCR6+ cells. See attached document.
DOI: 10.6084/m9.figshare.c.3604820_d8.v1
title: MOESM6 of A cancer cell-line titration series for evaluating somatic classification

description: Additional file 6: Table S3. A breakdown of the classification results for variants verified in 12 primary or xenograft PDAC samples.
DOI: 10.6084/m9.figshare.c.3604835_d3.v1
title: Additional file 1 of Mining for novel candidate clock genes in the circadian regulatory network

description: Complete score table from the meta-analysis for all the 1000 master list genes with individual hits of a gene within each data set. (XLSX 98 kb)
DOI: 10.6084/m9.figshare.c.3604820_d10.v1
title: MOESM1 of A cancer cell-line titration series for evaluating somatic classification

description: Additional file 1: Table S1. The chromosome, position, reference and alternative bases for the 193 SNVs and 17 indels that were verified as being true somatic calls are listed here. The variant read frequency observed in the verification sequencing is also listed here.
DOI: 10.6084/m9.figshare.c.3606806_d5.v1
title: Additional file 5: of Deimmunization for gene therapy: host matching of synthetic zinc finger constructs enables long-term mutant Huntingtin repression in mice

description: Raw data for the expression of ZF-KOX1 and mZF-KRAB. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3606836_d1.v1
title: Additional file 3: Table S3. of A genome-wide BAC-end sequence survey provides first insights into sweetpotato (Ipomoea batatas (L.) Lam.) genome composition

description: The BLASTN searching results of 4428 BESs with sweetpotato EST and NCBI EST database. (XLS 646 kb)
DOI: 10.15468/dl.dwbfbt
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ariomma regulus (Poey, 1868)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038228-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3606836_d2.v1
title: Additional file 6: Table S6. of A genome-wide BAC-end sequence survey provides first insights into sweetpotato (Ipomoea batatas (L.) Lam.) genome composition

description: The BLASTX searching results of 4428 BESs with protein databases of V. vinifera. (XLS 400 kb)
DOI: 10.6084/m9.figshare.c.3606836_d3.v1
title: Additional file 10: Table S10. of A genome-wide BAC-end sequence survey provides first insights into sweetpotato (Ipomoea batatas (L.) Lam.) genome composition

description: List of 288 SSR pairs developed from the sweetpotato BESs for assessing their polymorphisms. (XLS 75 kb)
DOI: 10.6084/m9.figshare.c.3606839_d4.v1
title: Additional file 2: of Common position of indels that cause deviations from canonical genome organization in different measles virus strains

description: List of partial measles virus sequences that include genomic region 5051–5078. (TXT 827 kb)
DOI: 10.6084/m9.figshare.c.3606857_d2.v1
title: Additional file 3: Table S3. of Abnormal serum microRNA profiles in tuberous sclerosis are normalized during treatment with everolimus: possible clinical implications

description: Raw expression data (expressed as Ct) of the studied group. TSC - tuberous sclerosis. (XLSX 121 kb)
DOI: 10.6084/m9.figshare.c.3606869_d1.v1
title: Additional file 3: Table S2. of Integrated analysis of gene expression from carbon metabolism, proteome and metabolome, reveals altered primary metabolism in Eucalyptus grandis bark, in response to seasonal variation

description: All metabolites identified in E. grandis bark. (XLSX 14Â kb)