cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.18094452
title: Additional file 2 of The landscape of human tissue and cell type specific expression and co-regulation of senescence genes

description: Additional file 2: Table S1. The SnG-enriched modules in 50 human tissues. Table S2. The k-means clusters of SnGs. Table S3. The k-means clusters of SnG-enriched modules. Table S4. The conserved 3-layer neighborhood of CDKN1A in the co-expression networks. Table S5. The conserved 3-layer neighborhood of TP53 in the co-expression networks. Table S6. The aggregated network of SnG-enriched modules. Table S7. The SASP factors from the aggregated network and their regulations by senescence and CDKN1A. Table S8. The cell types enriched (FDR &lt; 0.01) for each SnG-enriched module. Table S9. The age correlation of aggregated network genes. Table S10. The modules M81 and M82 in the brain hippocampus. Table S11. Gene coexistence proportion between senescence markers and aggregated network genes in single brain cells. Table S12. The module M6 in the testis. Table S13. Gene coexistence proportion between senescence markers and aggregated network genes in single testis cells. Table S14. The Cell communications between pancreas ductal cells and other cell types.
DOI: 10.6084/m9.figshare.18094452.v1
title: Additional file 2 of The landscape of human tissue and cell type specific expression and co-regulation of senescence genes

description: Additional file 2: Table S1. The SnG-enriched modules in 50 human tissues. Table S2. The k-means clusters of SnGs. Table S3. The k-means clusters of SnG-enriched modules. Table S4. The conserved 3-layer neighborhood of CDKN1A in the co-expression networks. Table S5. The conserved 3-layer neighborhood of TP53 in the co-expression networks. Table S6. The aggregated network of SnG-enriched modules. Table S7. The SASP factors from the aggregated network and their regulations by senescence and CDKN1A. Table S8. The cell types enriched (FDR &lt; 0.01) for each SnG-enriched module. Table S9. The age correlation of aggregated network genes. Table S10. The modules M81 and M82 in the brain hippocampus. Table S11. Gene coexistence proportion between senescence markers and aggregated network genes in single brain cells. Table S12. The module M6 in the testis. Table S13. Gene coexistence proportion between senescence markers and aggregated network genes in single testis cells. Table S14. The Cell communications between pancreas ductal cells and other cell types.
DOI: 10.15468/dl.uzugxg
title: Occurrence Download

description: A dataset containing 1238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Gymnopilus junonius (Fr.) P.D.Orton"
 ]
}

 The dataset includes 1238 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052902-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z7g55c
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Systomus tetrazona (Bleeker, 1855)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249048-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mbsjwx
title: Occurrence Download

description: A dataset containing 2139985 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Cerastium rivulare Cambess., Convolvulus arvensis L., Knautia arvensis (L.) Coult., Pinus halepensis Mill., Rosa canina L., Silene flos-cuculi (L.) Greuter & Burdet, Sonchus asper (L.) Hill)"
 ]
}

 The dataset includes 2139985 records from 1673 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036166-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y3wpwk
title: Occurrence Download

description: A dataset containing 575420 records in GBIF matching the query:
SELECT
 "year",
 GBIF_MGRSCode(10000, decimalLatitude, decimalLongitude,
 COALESCE(coordinateUncertaintyInMeters, 1000)) AS mgrsCode,
 speciesKey,
 species,
 family,
 COUNT(*) AS n,
 MIN(COALESCE(coordinateUncertaintyInMeters, 1000)) AS minCoordinateUncertaintyInMeters,
 IF(ISNULL(family), NULL, SUM(COUNT(*)) OVER (PARTITION BY family)) AS familyCount
 FROM
 occurrence
 WHERE
 occurrenceStatus = 'PRESENT'
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND countryCode = 'BE'
 AND "year" &gt;= 2000
 AND "year" &lt;= 2024
 AND speciesKey IS NOT NULL
 AND decimalLatitude IS NOT NULL
 AND decimalLongitude IS NOT NULL
 AND class = 'Aves'
 GROUP BY
 "year",
 mgrsCode,
 speciesKey,
 family,
 species
 ORDER BY
 "year" ASC,
 mgrsCode ASC,
 speciesKey ASC

 The dataset's 575420 records were derived from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012420-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15210947
title: Treated Radioactive Water-weibo posts

description: This dataset constitutes the primary data for the paper "Local Response to Global Risk: A Case Study of Risk Perception and Communication on Chinese Social Media Regarding Fukushima's Treated Radioactive Water Discharge." The data was collected from Weibo using a web crawler.
DOI: 10.5281/zenodo.15210948
title: Treated Radioactive Water-weibo posts

description: This dataset constitutes the primary data for the paper "Local Response to Global Risk: A Case Study of Risk Perception and Communication on Chinese Social Media Regarding Fukushima's Treated Radioactive Water Discharge." The data was collected from Weibo using a web crawler.
DOI: 10.5281/zenodo.15181098
title: b3data: Data resources for the b3verse

description: This data package contains data resources to be used across the b3verse. The b3verse is a collection of related R packages that streamline indicator calculation from occurrence cubes. The data package includes example datasets (occurrence cubes) as well as spatial resources like reference grids or raster data.
DOI: 10.5281/zenodo.15211008
title: b3data: Data resources for the b3verse

description: This data package contains data resources to be used across the b3verse. The b3verse is a collection of related R packages that streamline indicator calculation from occurrence cubes. The data package includes example datasets (occurrence cubes) as well as spatial resources like reference grids or raster data.
DOI: 10.3334/cdiac/otg.ts_munida
title: Partial pressure (or fugacity) of carbon dioxide, salinity and SEA SURFACE TEMPERATURE collected from Surface underway observations using Carbon dioxide (CO2) gas analyzer, Shower head chamber equilibrator for autonomous carbon dioxide (CO2) measurement and other instruments from Munida in the South Pacific Ocean from 2004-01-26 to 2006-07-30 (NCEI Accession 0100218)

description: This dataset includes Surface underway data collected from Munida in the South Pacific Ocean from 2004-01-26 to 2006-07-30. These data include Partial pressure (or fugacity) of carbon dioxide - water, SALINITY and SEA SURFACE TEMPERATURE. The instruments used to collect these data include Carbon dioxide (CO2) gas analyzer and Shower head chamber equilibrator for autonomous carbon dioxide (CO2) measurement.

These data were collected by Kim I. Currie of National Institute of Water and Atmospheric Research Limited (NIWA) as part of the Time_Series_Munida dataset. CDIAC associated the following cruise ID(s) with this dataset: 61MU20040126

The Global CO2 Time-series and Moorings Project involves international groups from 18 countries who have mounted sensors on moored buoys to provide high resolution time-series measurements of atmospheric boundary layer and surface ocean CO2 partial pressure (pCO2). The CO2 Time-series and Moorings Project is coordinated by UNESCO International Ocean Carbon Coordination Project (IOCCP).
DOI: 10.25549/pcra-c14-54830
title: Redemption tidings, vol. 36, nos. 1-52, 1 Jan. - 23 Dec. 1960

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.mfjucv
title: Occurrence Download

description: A dataset listing the 213 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is CABI Africa Invasive and Alien Species data"
 ]
}

 The dataset's 213 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030036-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5whpd6
title: Occurrence Download

description: A dataset containing 24305 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence)",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is EN",
 "OccurrenceStatus is Present",
 "Year 1900-2023"
 ]
}

 The dataset includes 24305 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0098125-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xtx7v2
title: Occurrence Download

description: A dataset containing 1239 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lindernia procumbens (Krock.) Philcox, Lindtneria trachyspora (Bourdot & Galzin) Pilát)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 1239 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0244539-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.74t3vc
title: Occurrence Download

description: A dataset containing 625 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cystophora cristata (Erxleben, 1777)"
 ]
}

 The dataset includes 625 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002715-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qx3a32
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pterygodium pentherianum Schltr."
 ]
}

 The dataset includes 53 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0098101-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e6648r
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhododendron thayerianum Rehder & E.H.Wilson"
 ]
}

 The dataset includes 17 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0383931-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqvbex
title: Occurrence Download

description: A dataset containing 8965 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Yucca brevifolia Engelm."
 ]
}

 The dataset includes 8965 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0384520-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-54433
title: Redemption tidings, vol. 35, nos. 1-46, 2 Jan. - 25 Dec. 1959

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.kg8h5p
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Botryosphaeria berengeriana De Not.",
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada"
 ]
 },
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 }
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0101169-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9bt3dp
title: Occurrence Download

description: A dataset containing 195636 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Forestry Inventory 2005"
 ]
}

 The dataset includes 195636 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0288861-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.swh55a
title: Occurrence Download

description: A dataset containing 211 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sphenomorphus nigrolineatus (Boulenger, 1897)"
 ]
}

 The dataset includes 211 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011440-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ku5nt
title: Occurrence Download

description: A dataset containing 2938765 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bubulcus ibis (Linnaeus, 1758)"
 ]
}

 The dataset includes 2938765 records from 1022 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0378964-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tvq7zb
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Renealmia congoensis Gagnep."
 ]
}

 The dataset includes 154 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0101159-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8znkf
title: Occurrence Download

description: A dataset containing 525828 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Glechoma hederacea L., Glomeris valesiaca Rothenbühler, 1899)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 525828 records from 875 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0358749-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1304723.09fu
title: SH1304723.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1304724.09fu
title: SH1304724.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1304725.09fu
title: SH1304725.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1304726.09fu
title: SH1304726.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1304727.09fu
title: SH1304727.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.