cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14054378
title: Animal-APdb: a comprehensive animal alternative promoter database

description: Alternative promoter (AP) events, as a major pre-transcriptional mechanism, can initiate different transcription start sites to generate distinct mRNA isoforms and regulate their expression. At present, hundreds of thousands of APs have been identified across human tissues, and a considerable number of APs have been demonstrated to be associated with complex traits and diseases. Recent researches have also proven important effects of APs on animals. However, the landscape of APs in animals has not been fully recognized.

In this study, 102,349 AP profiles from 23,137 samples across 12 species were systematically characterized. We further identified tissue-specific APs and investigated trait-related promoters among various species. In addition, we analyzed the associations between APs and enhancer RNAs (eRNA)/transcription factors (TF) as a means of identifying potential regulatory factors. Integrating these findings, we finally developed Animal-APdb, a database for the searching, browsing and downloading of information related to Animal APs.

Animal-APdb is expected to serve as a valuable resource for exploring the functions and mechanisms of APs in animals. Animal-APdb is available at http://gong_lab.hzau.edu.cn/Animal_AP#!/.
DOI: 10.5281/zenodo.14054379
title: Animal-APdb: a comprehensive animal alternative promoter database

description: Alternative promoter (AP) events, as a major pre-transcriptional mechanism, can initiate different transcription start sites to generate distinct mRNA isoforms and regulate their expression. At present, hundreds of thousands of APs have been identified across human tissues, and a considerable number of APs have been demonstrated to be associated with complex traits and diseases. Recent researches have also proven important effects of APs on animals. However, the landscape of APs in animals has not been fully recognized.

In this study, 102,349 AP profiles from 23,137 samples across 12 species were systematically characterized. We further identified tissue-specific APs and investigated trait-related promoters among various species. In addition, we analyzed the associations between APs and enhancer RNAs (eRNA)/transcription factors (TF) as a means of identifying potential regulatory factors. Integrating these findings, we finally developed Animal-APdb, a database for the searching, browsing and downloading of information related to Animal APs.

Animal-APdb is expected to serve as a valuable resource for exploring the functions and mechanisms of APs in animals. Animal-APdb is available at http://gong_lab.hzau.edu.cn/Animal_AP#!/.
DOI: 10.15468/dl.r9mhzg
title: Occurrence Download

description: A dataset containing 60164 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Birds Distribution from the Birds Directive (2013-2018)"
 ]
}

 The dataset includes 60164 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002812-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27228861
title: Thinning rates 1981 - 2021

description: Thinning rates 1981 - 2021
DOI: 10.6084/m9.figshare.27228861.v2
title: Thinning rates 1981 - 2021

description: Thinning rates 1981 - 2021
DOI: 10.6084/m9.figshare.27228861.v1
title: Thinning rates 1981 - 2021

description: Thinning rates 1981 - 2021
DOI: 10.15468/dl.9j7fxa
title: Occurrence Download

description: A dataset containing 415355 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Silene latifolia Poir."
 ]
}

 The dataset includes 415355 records from 2795 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002805-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvsb9h
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Filipendula angustiloba (Turcz. ex Fisch. & C.A.Mey.) Maxim."
 ]
}

 The dataset includes 125 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051649-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.edakoo
title: Occurrence Download

description: A dataset containing 10256 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abies pinsapo Boiss."
 ]
}

 The dataset includes 10256 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016337-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fkngmp
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pristimantis attenboroughi Lehr & von May, 2017"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042591-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5nzmx
title: Occurrence Download

description: A dataset containing 184 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drimia anomala (Baker) Baker"
 ]
}

 The dataset includes 184 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026473-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5jsbpu
title: Occurrence Download

description: A dataset containing 22130 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cereopsis novaehollandiae Latham, 1801"
 ]
}

 The dataset includes 22130 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016329-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tnvxpz
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diospyros tetrapoda H.Perrier"
 ]
}

 The dataset includes 19 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026474-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b3yj5u
title: Occurrence Download

description: A dataset containing 178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Astropyga pulvinata (Lamarck, 1816)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 178 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042599-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gzhedj
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Canis lupus pallipes Sykes, 1831"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016341-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7t75h3
title: Occurrence Download

description: A dataset containing 27972 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polioptila albiloris P.L.Sclater & Salvin, 1860"
 ]
}

 The dataset includes 27972 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042590-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zvcwsh
title: Occurrence Download

description: A dataset containing 4225 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Harpagus diodon (Temminck, 1823)"
 ]
}

 The dataset includes 4225 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026472-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7t6vyd
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Podilymbus gigas Griscom, 1929"
 ]
}

 The dataset includes 49 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016340-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9bytk8
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dolianthus kairoi A.P.Davis"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026493-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ayna4g
title: Occurrence Download

description: A dataset containing 6506 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Eucalyptus regnans F.Muell."
 ]
}

 The dataset includes 6506 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048145-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fgx9pc
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poicephalus gulielmi gulielmi"
 ]
}

 The dataset includes 63 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016343-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4s4xfy
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dierama erectum Hilliard"
 ]
}

 The dataset includes 23 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026484-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qxs5gx
title: Occurrence Download

description: A dataset containing 1618 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-108.7463 24.90803,-92.41411 24.90803,-92.41411 39.35131,-108.7463 39.35131,-108.7463 24.90803))",
 "HasCoordinate is true",
 "TaxonKey is Myricaceae"
 ]
}

 The dataset includes 1618 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048155-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1igdas
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "Year 1960-2019",
 "TaxonKey is Muntiacus feae (Thomas & Doria, 1889)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016342-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r73hwg
title: Occurrence Download

description: A dataset containing 1026 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Myiomela major (Jerdon, 1844)"
 ]
}

 The dataset includes 1026 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026631-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q3t7z6
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "GadmGid is one of (USA.26_1, USA.28_1, USA.14_1, USA.4_1)",
 "OccurrenceStatus is Present",
 "TaxonKey is Bombus nevadensis Cresson, 1874"
 ]
}

 The dataset includes 48 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048152-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dtviq7
title: Occurrence Download

description: A dataset containing 1373 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Mustela lutreola (Linnaeus, 1761)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1373 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016345-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.35kdcw
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drimia arenicola (B.Nord.) J.C.Manning & Goldblatt"
 ]
}

 The dataset includes 26 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026506-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wg75fv
title: Occurrence Download

description: A dataset containing 1153 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prosopis chilensis (Molina) Stuntz"
 ]
}

 The dataset includes 1153 records from 127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048164-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lnlbcn
title: Occurrence Download

description: A dataset containing 2337572 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mergus merganser Linnaeus, 1758"
 ]
}

 The dataset includes 2337572 records from 416 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016331-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brfvjz
title: Occurrence Download

description: A dataset containing 904 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pistacia ×saportae Burnat",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 904 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004242-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jgrf7h
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diplazium oligosorum Copel."
 ]
}

 The dataset includes 26 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026555-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a93dbj
title: Occurrence Download

description: A dataset containing 90431 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anopheles Meigen, 1818"
 ]
}

 The dataset includes 90431 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010404-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2me86e
title: Occurrence Download

description: A dataset containing 57275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.7_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Hymenoptera"
 ]
}

 The dataset includes 57275 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004250-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ts5jyh
title: Occurrence Download

description: A dataset listing the 68 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Halictidae"
 ]
}

 The dataset's 68 records were derived from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026647-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ygrme
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Renealmia reticulata Gagnep."
 ]
}

 The dataset includes 9 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010404-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xwjp2t
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erithalis salmeoides Correll"
 ]
}

 The dataset includes 58 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026655-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ps93ty
title: Occurrence Download

description: A dataset containing 4562 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Eucalyptus sideroxylon A.Cunn. ex Woolls"
 ]
}

 The dataset includes 4562 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048165-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6zlxxf
title: Occurrence Download

description: A dataset containing 8611 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pyrrhula murina Godman, 1866"
 ]
}

 The dataset includes 8611 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016349-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nqqwcn
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drimia barbata J.C.Manning & J.M.J.Deacon"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026521-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kwmuk5
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Festuca igoschiniae Tzvelev"
 ]
}

 The dataset includes 154 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051651-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ypf7wu
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "Year 1960-2019",
 "TaxonKey is Presbytis femoralis (Martin, 1838)"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016346-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8fwmm
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lanthanomelissa discrepans Holmberg, 1903",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 25 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026523-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w42wu6
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corybas ponapensis (Hosok. & Fukuy.) Hosok. & Fukuy."
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009086-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.