cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5916791
title: Dataset for the publication "Photoelectron energy peaks shift against the radiation pressure in strong field ionization"

description: The data used to create the figures in the publication "Photoelectron energy peaks shift against the radiation pressure in strong field ionization".
DOI: 10.5281/zenodo.5916790
title: Dataset for the publication "Photoelectron energy peaks shift against the radiation pressure in strong field ionization"

description: The data used to create the figures in the publication "Photoelectron energy peaks shift against the radiation pressure in strong field ionization".
DOI: 10.6084/m9.figshare.19091411
title: Quantum chemical properties of 6-AIH+ (aug-cc-pVDZ)

description: Collection of quantum chemical properties calculated during the time evolution of the surface hopping dynamics simulations. The set of properties available include:<br><br>- Potential energy for the ground-state surface (S0)- Total energy of the system (Ekin + Epot)- Energy gaps between the different state surfaces (DE10, DE20, DE30, and DE21)<br>- Oscillator strength for electronic transitions (f_01, f_02, and f_03)<br>- Population of each state (Pop0, Pop1, Pop2, and Pop3)<br>- Kinetic energies of each atom<br><br>In addition, there is one column with the trajectory identifier (TRAJ = {1..50}) and another column with the time line of the NAMD simulation. Two binary columns were also added to identify the hopping points between states (Hops_S21 and Hops_S32).
DOI: 10.6084/m9.figshare.19091411.v1
title: Quantum chemical properties of 6-AIH+ (aug-cc-pVDZ)

description: Collection of quantum chemical properties calculated during the time evolution of the surface hopping dynamics simulations. The set of properties available include:<br><br>- Potential energy for the ground-state surface (S0)- Total energy of the system (Ekin + Epot)- Energy gaps between the different state surfaces (DE10, DE20, DE30, and DE21)<br>- Oscillator strength for electronic transitions (f_01, f_02, and f_03)<br>- Population of each state (Pop0, Pop1, Pop2, and Pop3)<br>- Kinetic energies of each atom<br><br>In addition, there is one column with the trajectory identifier (TRAJ = {1..50}) and another column with the time line of the NAMD simulation. Two binary columns were also added to identify the hopping points between states (Hops_S21 and Hops_S32).
DOI: 10.6084/m9.figshare.19091426
title: Internal coordinates for 7-AIH+ (aug-cc-pVDZ)

description: Structured dataset containing the Z-Matrix representation of the molecular geometries of protonated 7-azaindole extracted from Newton-X NAMD trajectories. The Z-Matrices are represented as flattened vectors with 42 columns, where 15 correspond to bond lengths, 14 correspond to angles, and the last 13 columns contains the dihedral angles. The geometries were extracted from Newton-X outputs and converted into the Z-matriix representation using the ULaMDyn package.
DOI: 10.6084/m9.figshare.19091441
title: Internal coordinates for 6-AIH+ (aug-cc-pVDZ)

description: Structured dataset containing the Z-Matrix representation of the molecular geometries of protonated 6-azaindole extracted from NAMD trajectories simulated with Newton-X program. The Z-Matrices are represented as flattened vectors with 42 columns, where 15 correspond to bond lengths, 14 correspond to angles, and the last 13 columns contains the dihedral angles. The geometries were extracted from Newton-X outputs and converted into the Z-matriix representation using the ULaMDyn package.
DOI: 10.6084/m9.figshare.19091441.v1
title: Internal coordinates for 6-AIH+ (aug-cc-pVDZ)

description: Structured dataset containing the Z-Matrix representation of the molecular geometries of protonated 6-azaindole extracted from NAMD trajectories simulated with Newton-X program. The Z-Matrices are represented as flattened vectors with 42 columns, where 15 correspond to bond lengths, 14 correspond to angles, and the last 13 columns contains the dihedral angles. The geometries were extracted from Newton-X outputs and converted into the Z-matriix representation using the ULaMDyn package.
DOI: 10.5281/zenodo.5917720
title: Customized gtf file from Ensembl version 99 galGal6

description: The gtf from Ensembl version 99 (galGal6) was filtered to remove readthrough transcripts and all non-coding transcripts from a protein-coding gene. In addition, all genes with the same gene name which overlaps were merged under the same gene id to avoid ambiguous reads.
DOI: 10.5281/zenodo.5917719
title: Customized gtf file from Ensembl version 99 galGal6

description: The gtf from Ensembl version 99 (galGal6) was filtered to remove readthrough transcripts and all non-coding transcripts from a protein-coding gene. In addition, all genes with the same gene name which overlaps were merged under the same gene id to avoid ambiguous reads.
DOI: 10.25345/c5pk43
title: MassIVE MSV000088746 - peptide raw files and proteomics result files for phospho+ox modification
title: oxidation-phosphorylation Double PTM result files of proteomics data and verification raw result files with custom peptide
DOI: 10.5281/zenodo.5917742
title: Harmonized Cultural Access & Participation Dataset for Music

description: - `visit_concert`: This is a standard CAP variables about visiting frequencies. <br> - `is_visit_concert`: binary variable, 0 if the person had not visited concerts in the previous 12 months.<br> - `artistic_activity_played_music`: A variable of the frequency of playing music as an amateur or professional practice, in some surveys we have only a binary variable (played in the last 12 months or not) in other we have frequencies. We will convert this into a binary variable. <br> - `artistic_activity_sung`: A variable of the frequency of singing as an amateur or professional practice, like played_muisc. Because of the liturgical use of singing, and the differences of religious practices among countries and gender, this is a significantly different variable from played_music.<br> - `age_exact`: The respondent’s age as an integer number. <br> - `country_code`: an ISO country code<br> - `geo`: an ISO code that separates Germany to the former East and West Germany, and the United Kingdom to Great Britain and Northern Ireland, and Cyprus to Cyprus and the Turiksh Cypriot community.[we may leave Turkish Cyprus out for practical reasons.]<br> - `age_education`: This is a harmonized education proxy. Because we work with the data of more than 30 countries, education levels are difficult to harmonize, and we use the Eurobarometer standard proxy, age of leaving education. It is a specially coded variable, and we will re-code them into two variables, `age_education` and `is_student`. <br> - `is_student`: is a dummy variable for the special coding in age_education for “still studying”, i.e. the person does not have yet a school leaving age. It would be tempting to impute `age` in this case to `age_education`, but we will show why this is not a good strategy.<br> - `w`, `w1`: Post-stratification weights for the 15+ years old population of each country. Use `w1` for averages of `geo` entities treating Northern Ireland, Great Britain, the United Kingdom, the former GDR, the former West Germany, and Germany as geographical areas. Use `w` when treating the United Kingdom and Germany as one territory.<br> - `wex`: Projected weight variable. For weighted average values, use `w`, `w1`, for projections on the population size, i.e., use with sums, use `wex`.<br> - `id`: The identifier of the original survey.<br> - `rowid``: A new unique identifier that is unique in all harmonized surveys, i.e., remains unique in the harmonized dataset.
DOI: 10.25345/c5k58j
title: MassIVE MSV000088747 - Top-down venom proteomics of different Viperinae
title: Venom proteomics of different mainly Turkish vipers [to be continued]
DOI: 10.5281/zenodo.5917602
title: Daily NOAA Global Ensemble Forecasting System forecasts for six National Ecological Observatory Network lakes (2021--05-18 to 2021-10-24)

description: NOAA Global Ensemble Forecasting System output generated at 00 UTC that has been subsetted and temporally downscaled from 6-hr to 1-hr for six lakes in the National Ecological Observatory Network. The files include all ensembles and the set of variables required to run the General Lake Model. The NEON siteID for the lakes are BARC, SUGG, CRAM, LIRO, PRLA, PRPO. See https://www.neonscience.org for more information about each lake.
DOI: 10.5281/zenodo.5917879
title: Collection of primary literature pdfs from the Goldberg reviews

description: These are the archive copies of all currently crawled pdf files from the Goldberg reviews.
DOI: 10.12751/g-node.s549qk
title: Calcium imaging of hippocampal activity under anesthesia and natural sleep in mice

description: Large-scale, annotated collection of 2-photon calcium imaging data in CA1 of the murine hippocampus under three distinct anesthetics (Isoflurane, Keta/Xyl and MMF), during natural sleep, and during wakefulness.
description: IsDescribedBy: Formozov, A. et al. Calcium imaging and electrophysiology of hippocampal activity under anesthesia and natural sleep in mice. Scientific data. 2022.
description: IsSupplementTo: Yang, W., Chini, M. et al. Anesthetics fragment hippocampal network activity, alter spine dynamics, and affect memory consolidation. PLoS biology, 19(4), e3001146. (https://doi.org/10.1371/journal.pbio.3001146)
description: IsSourceOf: Formozov A, Chini M, Dieter A, Yang W, Pöpplau JA, Hanganu-Opatz IL, Wiegert JS (2022) Calcium imaging and electrophysiology of hippocampal activity under anesthesia and natural sleep in mice. G-Node. https://doi.org/10.12751/g-node.lkx6kk
DOI: 10.12751/g-node.lkx6kk
title: Calcium imaging and electrophysiology of hippocampal activity under anesthesia and natural sleep in mice

description: Large-scale, annotated collection of 2-photon calcium imaging data and electrophysiological recordings in CA1 of the murine hippocampus under three distinct anesthetics (Isoflurane, Keta/Xyl and MMF), during natural sleep, and during wakefulness.
description: IsDescribedBy: Formozov, A. et al. Calcium imaging and electrophysiology of hippocampal activity under anesthesia and natural sleep in mice. Scientific data. 2022.
description: IsSupplementTo: Yang, W., Chini, M. et al. Anesthetics fragment hippocampal network activity, alter spine dynamics, and affect memory consolidation. PLoS biology, 19(4), e3001146. (https://doi.org/10.1371/journal.pbio.3001146)
description: IsDerivedFrom: Formozov A, Chini M, Dieter A, Yang W, Pöpplau JA, Hanganu-Opatz IL, Wiegert JS (2022) Calcium imaging of hippocampal activity under anesthesia and natural sleep in mice. G-Node. https://doi.org/10.12751/g-node.s549qk
DOI: 10.34740/kaggle/dsv/3110320
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.34740/kaggle/dsv/3110339
title: 2021 World Population (updated daily)
DOI: 10.14272/bsmbzddpumoqpj-uhfffaoysa-n/chmo0000630
title: infrared absorption spectroscopy (IR) (N-pyridin-2-yl-3-pyridin-2-yliminoisoindol-1-amine)
title: InChI=1S/C18H13N5/c1-2-8-14-13(7-1)17(21-15-9-3-5-11-19-15)23-18(14)22-16-10-4-6-12-20-16/h1-12H,(H,19,20,21,22,23)

description: dataset for infrared absorption spectroscopy (IR) IR (ATR, ṽ) = 3257, 3196, 3153, 3139, 3131, 3121, 3111, 3087, 3061, 3048, 3037, 2996, 2963, 2928, 1708, 1623, 1606, 1578, 1551, 1455, 1426, 1373, 1363, 1305, 1258, 1248, 1217, 1200, 1181, 1140, 1096, 1041, 1033, 1007, 992, 959, 946, 885, 875, 853, 837, 807, 793, 783, 769, 737, 707, 697, 688, 649, 626, 609, 586, 551, 538, 499, 479, 469, 438, 409, 391, 384, 380 cm–1.
DOI: 10.14272/bsmbzddpumoqpj-uhfffaoysa-n/chmo0000593
title: 1H nuclear magnetic resonance spectroscopy (1H NMR) (N-pyridin-2-yl-3-pyridin-2-yliminoisoindol-1-amine)
title: InChI=1S/C18H13N5/c1-2-8-14-13(7-1)17(21-15-9-3-5-11-19-15)23-18(14)22-16-10-4-6-12-20-16/h1-12H,(H,19,20,21,22,23)

description: dataset for 1H nuclear magnetic resonance spectroscopy (1H NMR) 1H NMR (400 MHz, CDCl3) δ = 14.02 (s, 1H), 8.61 (dd, J = 4.8 Hz, J = 2.0 Hz, 2H), 8.17–8.03 (m, 2H), 7.76 (td, J = 7.7 Hz, J = 2.0 Hz, 2H), 7.65 (dd, J = 5.6 Hz, J = 3.1 Hz, 2H), 7.48 (d, J = 8.1 Hz, 2H), 7.12 (ddd, J = 7.4 Hz, J = 4.9 Hz, J = 1.1 Hz, 2H).
DOI: 10.14272/bsmbzddpumoqpj-uhfffaoysa-n.1
title: N-(2-pyridyl)-3-(2-pyridylimino)isoindol-1-amine
title: InChI=1S/C18H13N5/c1-2-8-14-13(7-1)17(21-15-9-3-5-11-19-15)23-18(14)22-16-10-4-6-12-20-16/h1-12H,(H,19,20,21,22,23)

description: This dataset contains experimental data from a sample (N-pyridin-2-yl-3-pyridin-2-yliminoisoindol-1-amine, InChI=1S/C18H13N5/c1-2-8-14-13(7-1)17(21-15-9-3-5-11-19-15)23-18(14)22-16-10-4-6-12-20-16/h1-12H,(H,19,20,21,22,23)). The datasets from the following experiments are available: mass spectrometry (MS) 1H nuclear magnetic resonance spectroscopy (1H NMR) 13C nuclear magnetic resonance spectroscopy (13C NMR) distortionless enhancement with polarization transfer (DEPT) distortionless enhancement with polarization transfer (DEPT) infrared absorption spectroscopy (IR)
DOI: 10.14272/bsmbzddpumoqpj-uhfffaoysa-n/chmo0000596
title: distortionless enhancement with polarization transfer (DEPT) (N-pyridin-2-yl-3-pyridin-2-yliminoisoindol-1-amine)
title: InChI=1S/C18H13N5/c1-2-8-14-13(7-1)17(21-15-9-3-5-11-19-15)23-18(14)22-16-10-4-6-12-20-16/h1-12H,(H,19,20,21,22,23)

description: dataset for distortionless enhancement with polarization transfer (DEPT)
DOI: 10.14272/bsmbzddpumoqpj-uhfffaoysa-n/chmo0000596.1
title: distortionless enhancement with polarization transfer (DEPT) (N-pyridin-2-yl-3-pyridin-2-yliminoisoindol-1-amine)
title: InChI=1S/C18H13N5/c1-2-8-14-13(7-1)17(21-15-9-3-5-11-19-15)23-18(14)22-16-10-4-6-12-20-16/h1-12H,(H,19,20,21,22,23)

description: dataset for distortionless enhancement with polarization transfer (DEPT)
DOI: 10.14272/bsmbzddpumoqpj-uhfffaoysa-n/chmo0000595
title: 13C nuclear magnetic resonance spectroscopy (13C NMR) (N-pyridin-2-yl-3-pyridin-2-yliminoisoindol-1-amine)
title: InChI=1S/C18H13N5/c1-2-8-14-13(7-1)17(21-15-9-3-5-11-19-15)23-18(14)22-16-10-4-6-12-20-16/h1-12H,(H,19,20,21,22,23)

description: dataset for 13C nuclear magnetic resonance spectroscopy (13C NMR) 13C NMR (101 MHz, CDCl3, ppm) δ = 160.4 (2C, CHq), 153.8 (2C, CHq), 147.9 (2C, CHar), 138.1 (2C, CHar), 135.8 (2C, CHq), 131.8 (2C, CHar), 123.3 (2C, CHar), 122.7 (2C, CHar), 120.3 (2C, CHar).Impurities (ppm): 133.6, 133.1 (unknown).
DOI: 10.14272/bsmbzddpumoqpj-uhfffaoysa-n/chmo0000470
title: mass spectrometry (MS) (N-pyridin-2-yl-3-pyridin-2-yliminoisoindol-1-amine)
title: InChI=1S/C18H13N5/c1-2-8-14-13(7-1)17(21-15-9-3-5-11-19-15)23-18(14)22-16-10-4-6-12-20-16/h1-12H,(H,19,20,21,22,23)

description: dataset for mass spectrometry (MS) MS (EI, 70 eV, 100 °C), m/z (%): 300 (19) [M+H]+, 299 (100) [M]+, 298 (44), 222 (10), 221 (49), 206 (21), 162 (11), 78 (42), 58 (14).HRMS–EI (m/z): [M]+ calcd for C18H13N5 299.1165; found 299.1167.
DOI: 10.5281/zenodo.5917956
title: Daily NOAA Global Ensemble Forecasting System forecasts for six National Ecological Observatory Network lakes (2021--05-18 to 2021-10-24)

description: NOAA Global Ensemble Forecasting System output generated at 00 UTC that has been subsetted and temporally downscaled from 6-hr to 1-hr for six lakes in the National Ecological Observatory Network. The files include all ensembles and the set of variables required to run the General Lake Model. The NEON siteID for the lakes are BARC, SUGG, CRAM, LIRO, PRLA, PRPO. See https://www.neonscience.org for more information about each lake.
DOI: 10.6084/m9.figshare.19073879
title: Non-malignant non-endodontic lesions mimicking periapical lesions of endodontic origin: a systematic review

description: Five electronic databases, PubMed, Web of Science, Scopus, Embase and ProQuest, were searched (till July 2021) for case reports, case series and cross-sectional studies, in English language, reporting NMNPL which were clinically and/or radiographically simulating periapical pathosis of endodontic origin. Data extraction was done followed by quality assessment of the included articles using the Joanna Briggs Institute tool for case reports and case series.
DOI: 10.34740/kaggle/dsv/3110497
title: COVID Vaccination in World (updated daily)
DOI: 10.6084/m9.figshare.6741425.v12
title: COCI N-Triples dataset of all the citation data

description: This dataset contains all the citation data (in N-Triples format) included in COCI, released on 25 November 2021. In particular, any citation in the dataset, defined as an individual of the class <i>cito:Citation</i>, includes the following information:<b>[citation IRI]</b> the Open Citation Identifier (OCI) for the citation, defined in the final part of the URL identifying the citation (https://w3id.org/oc/index/coci/ci/[OCI]);<b>[property "cito:hasCitingEntity"]</b> the citing entity identified by its DOI URL (http://dx.doi.org/[DOI]);<b>[property "cito:hasCitedEntity"]</b> the cited entity identified by its DOI URL (http://dx.doi.org/[DOI]);<b>[property "cito:hasCitationCreationDate"]</b> the creation date of the citation (i.e. the publication date of the citing entity);<b>[property "cito:hasCitationTimeSpan"]</b> the time span of the citation (i.e. the interval between the publication date of the cited entity and the publication date of the citing entity);<b>[type "cito:JournalSelfCitation"]</b> it records whether the citation is a journal self-citations (i.e. the citing and the cited entities are published in the same journal);<b>[type "cito:AuthorSelfCitation"]</b> it records whether the citation is an author self-citation (i.e. the citing and the cited entities have at least one author in common).This version of the dataset contains:<br>1,235,170,583 citations;69,897,400 bibliographic resources.The size of the zipped archive is 60.52 GB, while the size of the unzipped N-Triples file is 1.33 TB.<br>Additional information about COCI can be retrieved in the official webpage.<br>
DOI: 10.6084/m9.figshare.11663574.v9
title: COCI Scholix dataset of all the citation data

description: This dataset contains all the citation data (in Scholix format) included in COCI, released on 25 November 2021.<br>This version of the dataset contains:<br>1,235,170,583 citations;69,897,400 bibliographic resources.The size of the zipped archive is 32.49 GB, while the size of the unzipped Scholix file is 1.1 TB.<br>Additional information about COCI can be retrieved in the official webpage.<br>
DOI: 10.6084/m9.figshare.6741431.v12
title: COCI CSV dataset of the provenance information of all the citation data

description: This dataset contains the provenance information (in CSV format) of all the citation data included in COCI, released on 25 November 2021. In particular, each line of the CSV file defines a citation, and includes the following information:<b>[field "oci"]</b> the Open Citation Identifier (OCI) for the citation;<b>[field "agent"]</b> the name of the agent that have created the citation data;<b>[field "source"]</b> the URL of the source dataset from where the citation data have been extracted;<b>[field "datetime"]</b> the creation time of the citation data.The size of the zipped archive is 16.81 GB, while the size of the unzipped CSV file is 278.5 GB.<br>Additional information about COCI can be retrieved in the official webpage.
DOI: 10.6084/m9.figshare.6741446.v12
title: COCI N-Triples dataset of the provenance information of all the citation data

description: This dataset contains the provenance information (in N-Triples format) of all the citation data included in COCI, released on the 25 November 2021. In particular, any citation in the dataset includes the following provenance information:<b>[citation IRI]</b> the Open Citation Identifier (OCI) for the citation, defined in the final part of the URL identifying the citation (https://w3id.org/oc/index/coci/ci/[OCI]);;<b>[property "prov:wasAttributedTo"]</b> the IRI of the agent that have created the citation data;<b>[property "prov:hadPrimarySource"]</b> the IRI of the source dataset from where the citation data have been extracted;<b>[property "prov:generatedAtTime"]</b> the creation time of the citation data.The size of the zipped archive is 65 GB, while the size of the unzipped N-Triples file is 2.75 TB.<br>Additional information about COCI can be retrieved in the official webpage.
DOI: 10.6084/m9.figshare.16802158.v10
title: Good Fences Make Good Neighbours? On the Impact of Cultural and Geographical Dispersion on Community Smells

description: Appendix and Replication Package of the paper titled <b>Good Fences Make Good Neighbours! On the Impact of Cultural and Geographical Dispersion on Community Smells</b>.
DOI: 10.25505/fiz.icsd.cc2b090p
title: CSD 2145231: Experimental Crystal Structure Determination

description: Related Article: Nikita N. Harmalkar, Sunder N Dhuri, Bikshandarkoil R Srinivasan|2022|ICSD Communication|||
DOI: 10.5281/zenodo.5831843
title: Large-scale conformational changes of FhaC provide insights into the two-partner secretion mechanism

description: This dataset contains raw and processed data and analyses related to the manuscript "Large-scale conformational changes of FhaC provide insights into the two-partner secretion mechanism" by the authors. A preprint of this manuscript is available on bioRxiv (https://doi.org/10.1101/2021.11.09.467682).
description: The authors thank Xavier Hanoulle for useful suggestions and discussions at the start of this project and Isabelle Landrieu for her support and advice. This work was funded by the Agence Nationale de Recherche grant ANR-17-CE11-0043-02 "OPEN_BAR" to FJD and a "Projets exploratoires premier soutien (PEPS)" grant by the CNRS and the University of Lille to RS. Financial support and spectrometer access by the IR-RMN-THC FR 3050 CNRS for conducting NMR experiments at the IR-RMN platforms in Lille and Grenoble is gratefully acknowledged. EPR experiments were performed within the national facility RENARD at the University of Lille (Federation IR-RPE 3443). Support by the Centre National de la Recherche Scientifique (CNRS), Université de Strasbourg (Unistra) and the French Proteomic Infrastructure (ProFI; ANR-10-INBS-08-03) is acknowledged. The authors would also like to thank the IdeX program of the University of Strasbourg for funding the Synapt G2Si instrument.
DOI: 10.5281/zenodo.5831842
title: Large-scale conformational changes of FhaC provide insights into the two-partner secretion mechanism

description: This dataset contains raw and processed data and analyses related to the manuscript "Large-scale conformational changes of FhaC provide insights into the two-partner secretion mechanism" by the authors. A preprint of this manuscript is available on bioRxiv (https://doi.org/10.1101/2021.11.09.467682).
description: The authors thank Xavier Hanoulle for useful suggestions and discussions at the start of this project and Isabelle Landrieu for her support and advice. This work was funded by the Agence Nationale de Recherche grant ANR-17-CE11-0043-02 "OPEN_BAR" to FJD and a "Projets exploratoires premier soutien (PEPS)" grant by the CNRS and the University of Lille to RS. Financial support and spectrometer access by the IR-RMN-THC FR 3050 CNRS for conducting NMR experiments at the IR-RMN platforms in Lille and Grenoble is gratefully acknowledged. EPR experiments were performed within the national facility RENARD at the University of Lille (Federation IR-RPE 3443). Support by the Centre National de la Recherche Scientifique (CNRS), Université de Strasbourg (Unistra) and the French Proteomic Infrastructure (ProFI; ANR-10-INBS-08-03) is acknowledged. The authors would also like to thank the IdeX program of the University of Strasbourg for funding the Synapt G2Si instrument.
DOI: 10.5281/zenodo.5918401
title: Fluctuating exposures to UV radiation and Erythromycin result in increased mean and variance in fitness in novel environments

description: List of non-synonymous mutations identified in populations subjected to UV radiation and Erythromycin. Mutations identified in whole-population as well as in sub-populations resistant to either rifampicin or nalidixic acid are listed in separate files.