cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.878253_d62
title: relative_humidity_pct_1cm_soil_50_shade.zip

description: Relative humidity (%) 1 cm above the ground assuming a soil substrate and 50% shade from vegetation. Each netCDF file contains 24 layers of global extent, one for each hour of the day (starting at 0:00 hrs) for a given month of the year, at ~15km resolution.
 
 
Fileset Description:
The microclim dataset provides microclimate estimates of conditions above and below ground for each hour of the day for the middle day of each month based on a long-term average climatology. Details of this dataset are presented in [Kearney et al. 2014].
The dataset comprises a set of NetCDF files with one file per variable per month, each file comprising 24 layers (one for each hour of the day from 0:00 hrs to 23:00 hrs, so layer 13 is 12:00 midday) for the globe (852 rows, 2159 columns, latitudinal extents -58.57 to 83.43 degrees, longitudinal extents -180.00 to 180.00 degrees). For the naming convention, mon is month of the year (1 to 12, where 1 = Jan, 12 = Dec), shd is shade level in % (0, 25, 50, 75, 90, 100), and sub is substrate (soil, rock, sand).
To facilitate downloading the data, the NetCDF files are grouped into compressed (zipped) files, one per variable per shade and substrate type, each comprising all monthly values and, for the substrate temperatures, all depths. Note that not all variables are shade or substrate specific, specifically zenith angle, wind speeds, solar radiation, and 120 cm air temperature and relative humidity.
DOI: 10.3535/hww-apx-4kk
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ldw-1n3-ayj
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14237705.v1
title: Datasets (raw) used for MSc Thesis

description: Raw data used in MSc Thesis. Available for reproducing methodology
DOI: 10.3535/lbe-jvq-fx3
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1256359.v1
title: Scatter hoarding of seeds confers survival advantages and disadvantages to large-seeded tropical plants at different life stages

description: Data and supporting documentation for ms: "Scatter hoarding of seeds confers survival advantages and disadvantages to large-seeded tropical plants at different life stages"
DOI: 10.6084/m9.figshare.14459064.v1
title: Data for the impact of personalized advertising types on green purchase decision process. xlsx

description: The questionnaire was randomly distributed to online consumers using the site https://www.wjx.cn/. We distributed 370 sample questionnaires and received 340 valid samples (a validity rate of 91.9 %). Among the valid samples, 184 samples were based on their own personalized network recommendation (Group I), and 156 samples were based on others’ personalized network recommendations (Group II). The ratio of men to women was nearly 1:1. In addition, 90.8% of the respondents was less than 44 years old. The population within this age range belonged to active netizens who were more willing to cooperate with the study, most of which have undergraduate degree or above.
DOI: 10.3535/chn-qwa-662
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j9g-er4-6a7
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qst-ctc-wc1
title: Conularia sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gfr-yyp-tq1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cvn-s8h-pgx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/esz-x5y-ked
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3370648.v2
title: Kite-based Structure-from-Motion survey of Fort Fisher State Recreation Area beach, North Carolina, USA, 4/26/2016

description: Digital Surface Model (DSM), Orthophoto, Ground Control Point (GCP) coordinates (recorded using an RTK GNSS system), Structure-from-Motion report (with relevant parameters and spatial accuracy) and raw aerial images from a kite-based survey of the beach at Fort Fisher State Recreation Area, NC on April 26th, 2016. DSM and Orthophoto was constructed with 29 GCPs. GCP coordinates are given in NC State Plane Coordinate system, NAD 83, Geoid 09. Dense point cloud is included as a text file (X,Y, Z, R, G, B)
DOI: 10.3535/4fh-za2-vae
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4s8-hz0-4s4
title: Eurypterida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22779062.v1
title: Civic and political volunteering

description: Cross-national survey data attached to Civic and Political Volunteering paper published in Journal of Information Technology & Politics
DOI: 10.17632/msjh6rpskc
title: Data for: Exploration of power conversion thermodynamic cycles for ARC fusion reactor

description: Example of Python script developed for the optimization of the thermodynamic efficiency of a possible thermodynamic cycle applied to ARC reactor.
DOI: 10.3535/128-1ss-wbq
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2e9-mpq-p82
title: †Dianulites petropolitanus Dybowski, 1877 ()

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.107054.v2
title: CNS Discovery Pipeline Supporting Data

description: These datasets describe the locations of conserved noncoding sequences identified in comparisons between orthologous genes in multiple plant species as well as comparisons between duplicated genes within a single species.
DOI: 10.6084/m9.figshare.25285123.v1
title: Data for the study of intellectual capital

description: The research is aimed at studying the relationship between the intellectual capital of Russian companies and their financial and market indicators
DOI: 10.17632/4y9w8zh4jr
title: Data for: Cooking Up the Ingredients for Successful Culinary Career: A Compendium of Key Competencies of Quality Culinary Workforce for Sustainable Career Development

description: Mendeley Data for references
DOI: 10.3535/hxt-3r5-jj6
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kt2-fwn-hk8
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/b8l-91g-a50
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kj3-1b6-dkq
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2t3-q2j-t4e
title: Animalia

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jma-0pa-m7h
title: †Diplotrypa petropolitana Nicholson, 1879

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24019218.v5
title: Evolved Changes in Phenotype Across Skeletal Muscles in Deer Mice Native to High Altitude

description: See associated publication for units, additional details on data, and experimental design.
DOI: 10.3535/bva-1zs-vey
title: Conularia pectinata Holm

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hbe-d22-9k6
title: Conularia pectinata Holm

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12081798.v1
title: Monthly movement behaviour data

description: The monthly movement behaviour characteristics from forest elephants. <br><br>Analysed in: Climatic and resource determinants of forest elephant movements<br>
DOI: 10.3535/kge-gpr-781
title: Calcite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wkx-tvw-2s8
title: †Endoceras J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28477844.v1
title: microglia

description: This dataset includes the Flow cytometry, Elisa,Qpcr and IF data.
DOI: 10.17632/5vf53yy24p
title: The role of low molecular weight organic acids in the release of phosphorus from sewage sludge-based biochar

description: The dataset presents the set of results describing the extractable proportions of phosphorus and other nutrients from the sewage sludge-based biochar including the statistical evaluation of the data
DOI: 10.3535/5xd-ssf-9ga
title: Eurypterida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/avh-2e4-rmg
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/by8-7rq-95q
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.57841/casdc.0005216
title: 20只5FAD小鼠行为实验数据
DOI: 10.6084/m9.figshare.1056515
title: Fast and Stable Multiple Smoothing Parameter Selection in Smoothing Spline Analysis of Variance Models With Large Samples

description: The current parameterization and algorithm used to fit a smoothing spline analysis of variance (SSANOVA) model are computationally expensive, making a generalized additive model (GAM) the preferred method for multivariate smoothing. In this article, we propose an efficient reparameterization of the smoothing parameters in SSANOVA models, and a scalable algorithm for estimating multiple smoothing parameters in SSANOVAs. To validate our approach, we present two simulation studies comparing our reparameterization and algorithm to implementations of SSANOVAs and GAMs that are currently available in R. Our simulation results demonstrate that (a) our scalable SSANOVA algorithm outperforms the currently used SSANOVA algorithm, and (b) SSANOVAs can be a fast and reliable alternative to GAMs. We also provide an example with oceanographic data that demonstrates the practical advantage of our SSANOVA framework. Supplementary materials that are available online can be used to replicate the analyses in this article.
DOI: 10.6084/m9.figshare.12912458.v1
title: Meaning in work: Spanish adaptation and analysis of psychometric properties of the Work and Meaning Inventory

description: Validation WAMI scale in Spanish
DOI: 10.6084/m9.figshare.19898601.v1
title: From geotechnics to participatory management: a critical analysis of university extension projects with a focus on disaster risk reduction

description: Abstract The university extension is the conductive space-time for the direct articulation between scientific knowledge and society, linking innovation and social commitment of the University. Focusing on the urgent theme of Disaster Risk Reduction (DRR), this paper analyzed and systematized contents and methods used in four extension projects developed by the Risk Management Laboratory of the Federal University of ABC (LabGRis-UFABC) between 2012 and 2021. There was a process of evolution in the theoretical-methodological approach on disaster risk reduction (DRR) and the insertion of participatory learning processes, which corroborate the evolutionary line of four international milestones in DRR: Yokohama (1994), Hyogo (2005), Sendai (2015) and the Sustainable Development Goals (2015). The results point to the role of the University in criticizing the failure of traditional methodologies, expressed in the tragic persistence of the disasters that we are witnessing, as well as the role of local stakeholders through processes of co-production of knowledge and sharing of risk decision-making, which are enhanced by university extension, as the way forward for safe, resilient and socially just communities.
DOI: 10.6084/m9.figshare.25560936.v1
title: <b>Influences on the Emergence of Strategic Visuomotor Learning Mechanisms in School-Aged Children</b>

description: Visuomotor learning, the ability to adapt our movement to the visual cues provided by our surroundings, is one of the most fundamental skills that develop during childhood. Visuomotor learning is divided into implicit procedural learning, which is a process through which movements are unconsciously improved based on visual signals, and explicit strategic learning, which is the conscious adoption of a planned behavior to achieve a desired result. In our study, we show that implicit procedural learning is present from an early school age. We likewise show that the capacity for explicit strategic learning is associated with chronological age as opposed to motor skills or IQ.
DOI: 10.3535/gsh-7y5-21w
title: Animalia

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wjt-azb-86b
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14399489.v1
title: mRNA and DNAm references for liver

description: The data contains a 658-marker expression reference and a 171-marker DNAm reference for Liver, which can be used to estimate cell type fractions of cholangiocytes, endothelial cells, hepatocytes, immune cells and kupffer cells (macrophages) in Liver tissue with EpiSCORE framework.<br>Liver_Expref.csvA scRNAseq expression reference for Liver. Each row is a marker gene (in gene symbol) and each column is a cell type. For each marker gene, the value of the reference matrix is the median expression level for each type of cells in scRNAseq data.<br>Liver_Mref.csvA DNAm reference for Liver. Each row is a marker gene (in entrezID) and each column is a cell type. The last column is the weight for each marker. The value of the matrix is the imputed DNAm level from expression reference.
DOI: 10.6084/m9.figshare.22273066.v1
title: Figure 1: Fasta file

description: FASTA file containing CD4 CDS protein coding sequences from primates closely related to Homo Sapiens who are affected by HIV-1/SIV. This file contains 11 aligned cds protein coding sequences, found through NCBI and Ensembl BLAST. This file was then used for many other bioinformatic analysis applications further in our project.
DOI: 10.6084/m9.figshare.28378307.v1
title: JDS-Supplementary material

description: The relationship between the isolation habitats of <i>Lactiplantibacillus plantarum</i> strains and their specific functional phenotypes remain insufficiently understood. Our findings revealed significant variations in functional phenotypes among different habitats-derived strains. Specifically, strains isolated from fermented grape must showed significantly greater bile acid deconjugation ability, while those from fermented dairy products exhibited significantly higher angiotensin-converting enzyme inhibitory activity during soymilk fermentation but lower phenyllactic acid production from phenylpyruvic acid. These results highlight the influence of isolation habitat on the functional properties of <i>Lactiplantibacillus plantarum</i> strains and provide insights into the target selection of strains with desired functional properties.
DOI: 10.6084/m9.figshare.5670745.v1
title: Risk factors for implant failure: a retrospective study in an educational institution using GEE analyses

description: Abstract This study aimed to evaluate dental implant outcomes and to identify risk factors associated with implant failure over 12 years via dental records of patients attending an educational institution. Dental records of 202 patients receiving 774 dental implants from 2002 to 2014 were analyzed by adopting a more reliable statistical method to evaluate risk factors with patients as the unit [generalized estimating equation (GEE)]. Information regarding patient age at implantation, sex, use of tobacco, and history of systemic diseases was collected. Information about implant location in the arch region and implant length, diameter, and placement in a grafted area was evaluated after 2 years under load. Systemic and local risk factors for early and late implant failure were studied. A total of 18 patients experienced 25 implant failures, resulting in an overall survival rate of 96.8% (2.84% and 0.38% early and late implant failures, respectively). The patient-based survival rate was 91.8%. GEE univariate and multivariate analyses revealed that a significant risk factor for implant failure was the maxillary implant (p = 0.006 and p = 0.014, respectively). Bone grafting appeared to be a risk factor for implant failure (p = 0.054). According to GEE analyses, maxillary implants had significantly worse outcomes in this population and were considered to be a risk factor for implant failure. Our results suggested that implants placed in a bone augmentation area had a tendency to fail.
DOI: 10.3535/8b7-rlw-jzj
title: Eurypterida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w6v-kgc-eea
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12866657.v1
title: Figure 3 from manuscript Sparsely-Connected Autoencoder (SCA) for single cell RNAseq data mining

description: Dataset used to generate figure 3: COMET analysis of latent space frequency matrix. A) Set of 4 genes (PAX5, NFAT5, RFXANK and CHD4) characterizing cluster 1 (B-cells) (figure3/setA/Results/setATF_SIMLR/5/outputvis/cluster_1_discrete_quads/rank_1.png). B) Set of 4 genes (CEBPA, KHSRP negation, CEBPB, CREBBP) characterizing cluster 2 (Monocytes) (figure3/setA/Results/setATF_SIMLR/5/outputvis/cluster_2_discrete_quads/rank_1.png). Dots are cells, blue and red colour indicates respectively false and true positives (for more information on this type of visualization of cluster specific markers see the COMET paper). C) Rank 1 NK signature specifically characterizing cluster 4 (NK) (figure3/setA/Results/setAIS2_KMEAN/5/outputvis/cluster_4_singleton/rank_1.png). D) Rank 2 Asthma KEGG negation, specifically characterizing Naïve T-cells (Cluster 5) (figure3/setA/Results/setAIS2_KMEAN/5/outputvis/cluster_5_singleton/rank_2.png).
DOI: 10.6084/m9.figshare.20043592.v1
title: Insertion torque versus mechanical resistance of mini- implants inserted in different cortical thickness

description: OBJECTIVE: This study aimed to measure insertion torque, tip mechanical resistance to fracture and transmucosal neck of mini-implants (MI) (Conexão Sistemas de PróteseT), as well as to analyze surface morphology. METHODS: Mechanical tests were carried out to measure the insertion torque of MIs in different cortical thicknesses, and tip mechanical resistance to fracture as well as transmucosal neck of MIs. Surface morphology was assessed by scanning electron microscopy (SEM) before and after the mechanical tests. RESULTS: Values of mechanical resistance to fracture (22.14 N.cm and 54.95 N.cm) were higher and statistically different (P &lt; 0.05) from values of insertion torque for 1-mm (7.60 N.cm) and 2-mm (13.27 N.cm) cortical thicknesses. Insertion torque was statistically similar (P &gt; 0.05) to torsional fracture in the tip of MI (22.14 N.cm) when 3 mm cortical thickness (16.11 N.cm) and dense bone (23.95 N.cm) were used. Torsional fracture of the transmucosal neck (54.95 N.cm) was higher and statistically different (P &lt; 0.05) from insertion torsional strength in all tested situations. SEM analysis showed that the MIs had the same smooth surface when received from the manufacturer and after the mechanical tests were performed. Additionally, no significant marks resulting from the manufacturing process were observed. CONCLUSION: All mini-implants tested presented adequate surface morphology. The resistance of mini-implants to fracture safely allows placement in 1 and 2-mm cortical thickness. However, in 3-mm cortical thickness and dense bones, pre-drilling with a bur is recommended before insertion.
DOI: 10.3535/s5f-jpr-x92
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wg2-k5w-l7m
title: Aethilla Hewitson, 1868

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27022297.v2
title: Can combining mHealth computerized CBT with post-learning oscillatory modulation optimize and stabilize improvements in self-esteem? A randomized controlled trial

description: Self-esteem, crucial for psychological well-being, can be enhanced through targeted interventions like Cognitive Behavioral Therapy (CBT). However, traditional CBT faces accessibility barriers, and its benefits may diminish over time. Digital health interventions such as computerized CBT and mobile health (mHealth) applications offer potential solutions. Recent research suggests that brain oscillations, particularly theta rhythms, play a key role in memory consolidation. Combining computerized CBT with post-learning theta rhythm modulation may optimize and stabilize improvements in self-esteem and promote neuro-wellbeing. This six-month longitudinal study aimed to evaluate the synergistic effects of a computerized CBT intervention (GGSE) combined with post-training theta rhythm brain modulation on improving self-esteem in young adults with low self-esteem. Participants were randomly allocated to three groups: GGSE + theta Audio-Visual Entrainment (AVE) with Cranio-Electro Stimulation (CES), GGSE + beta AVE+CES (active control), and GGSE only (control). The intervention lasted three weeks. Assessments of self-esteem, maladaptive beliefs, and mood were conducted at baseline, 21 days, 42 days, and six months post-baseline. Although post-treatment oscillatory entrainment did not enhance the long-term efficacy of the intervention, treatment effects persisted for six months across all groups. These results support the potential long-term efficacy of brief, game-like, digital CBT approaches for improving self-esteem.
DOI: 10.6084/m9.figshare.5364010.v2
title: Flow Cytometry Data from Genome size variation in deep-sea amphipods.

description: Genome size varies considerably across taxa, and extensive research effort has gone into understanding whether variation can be explained by differences in key ecological and life-history traits among species. The extreme environmental conditions that characterize the deep sea have been hypothesized to promote large genome sizes in eukaryotes. Here we test this supposition by examining genome sizes among 13 species of deep-sea amphipods from the Mariana, Kermadec and New Hebrides trenches. Genome sizes were estimated using flow cytometry and found to vary nine-fold, ranging from 4.06 pg (4.04 Gb) in <i>Paralicella caperesca</i> to 34.79 pg (34.02 Gb) in <i>Alicella gigantea</i>. Phylogenetic independent contrast analysis identified a relationship between genome size and maximum body size, though this was largely driven by those species that display size gigantism. There was a distinct shift in the genome size trait diversification rate in the supergiant amphipod <i>A. gigantea</i> relative to the rest of the group. The variation in genome size observed is striking and argues against genome size being driven by a common evolutionary history, ecological niche and life-history strategy in deep-sea amphipods.