cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/t5f554s7cn
title: Tree leaf and needle spectra for three sites in northern and central Europe

description: This dataset contains reflectance and transmittance spectra of leaf and needle samples, collected near peak growing season in 2019 and 2020, from three study sites in northern and central Europe: Hyytiälä (61°51'N, 24°18'E, Finland), Järvselja (58°17'N, 27°19'E, Estonia), and Bílý Kříž (49°30'N, 18°32'E, the Czech Republic).

The spectra have been reported in Hovi, A., Lukeš, P., Homolová, L., Juola, J., Rautiainen, M. (2022a). Small geographical variability observed in Norway spruce needle spectra across Europe. Silva Fennica vol. 56 no. 2 article id 10683. https://doi.org/10.14214/sf.10683. If using the data, please cite the above publication and the Mendeley Dataset: Hovi, A., Juola, J., Lukeš, P., Homolová, L., Rautiainen, M. (2022b). Tree leaf and needle spectra for three sites in northern and central Europe. Mendeley Data, V1, https://doi.org/10.17632/t5f554s7cn.1.

For the following species and study sites, we collected samples from three individual trees per study site. For each tree, we measured three samples of top-of-canopy (predominantly sun-exposed) and three samples of bottom-of-canopy (predominantly shaded) foliage. For evergreen conifers, we sampled current-year and one-year-old needles, which doubled the number of samples. For each tree, characteristics (height, diameter) of the tree and the surrounding forest stand were recorded.

    Norway spruce (Picea abies (L.) H. Karst), all sites
    Scots pine (Pinus sylvestris L.), Hyytiälä/Järvselja
    silver birch (Betula pendula Roth), Hyytiälä/Järvselja
    black alder (Alnus glutinosa (L.) Gaertn.), Järvselja
    European aspen (Populus tremula L.), Järvselja

The spectra of the following five rare species in the Järvselja site were also measured. These data were not reported in Hovi et al. (2022a) but are included here for the sake of thoroughness. For these species, we sampled one tree per species and only top-of-canopy foliage. Three samples per each tree were collected. These trees were all young (up to 5 m in height). No measurements of the tree or stand characteristics were made.

    American hazelnut (Corylus avellana L.)
    small-leaved linden (Tilia cordata Mill.)
    goat willow (Salix caprea L.)
    European ash (Fraxinus Excelsior L.)
    other willow, species unknown (Salix sp.)

For further details of the data collection, measurements, and the content of the data files, see Hovi et al. (2022a) and README.pdf.
DOI: 10.17632/vkhtwb774t
title: SLM 3D printed lattice structures for mechanical interlocking of metal and resin for high interface bonding strength

description: This data set is a part of a study in which various struts-based lattice structure has been designed over a stainless steel (SUS 316L) substrate for 3D-printing by SLM process, so as to create resin-metal bond at the interface during the plastic injection molding process. In this study, different lattice structures were first designed in a CAD environment and the strength of the subsequent lattice-resin interlock was predicted using the Finite Element Analysis (FEA) method. The numerical model for FEA simulation was generated in the ABAQUS/CAE 2020 Standard solver. The test samples were fabricated using SLM and injection molding process. Individual stress status of lattice and resin during tensile test in the Instron 5967 tensile testing machine were investigated to determine the failure strength of lattice-resin interlock. The Charts in this dataset include the pull force data for each of the designed lattice structure acquired by FEA simulation. The charts also include the raw data of the failure stress of all the tested samples.
DOI: 10.17632/5gfnxmtd2p
title: Annex 3. Annex 3. Dades d’etnobotànica alturgellenca prèvies a la present tesi doctoral.

description: Dades d’etnobotànica alturgellenca prèvies a la present tesi doctoral.
DOI: 10.17632/hb8mx8xt2n
title: Filter trapping protocol to detect aggregated proteins in human cell lines

description: The loss of protein homeostasis results in cytotoxic protein aggregates, a common hallmark of aging and neurological diseases. Here, we present an adjusted filter trapping assay protocol to detect global aggregated proteins in human cell lines, via a high-sensitive protein staining method. This protocol also details an alternative approach to monitor specific protein aggregates trapped in the filter membrane, by subsequent immunoblotting of ectopically expressed and endogenous proteins.

For complete details on the use and execution of this protocol, please refer to (Chhipi-Shrestha et al., 2021).
DOI: 10.17632/jx5hnnw99d
title: Precipitation satellite data from CHIRPS and TAMSAT models for 8 major cities of Sirba watershed, Burkina Faso

description: This dataset contains satellite rainfall data for eight major cities in the Sirba River Basin, Burkina Faso, derived from two products: the CHIRPS model and the TAMSAT model. The two zip archives, named according to the reference model, contain within them 8 folders, one for each city investigated. Each folder contains within it a file (nameofthecityMODEL_19832023).xlsx with the 40-year rainfall series and four folders (indices, log, plots, trend) containing the computations obtained using RClimdex software to calculate ETCCDI rainfall climate indices.

The data presented can be used for future insights and researches on the watershed.
DOI: 10.17632/rgkgkfsyn2
title: Willingness to pay for fast-track tickets in the alpine skiing industry

description: The data used in this study were collected from a survey of active skiers conducted during February and March 2019, at a major ski resort in Norway. Before data collection took place, the questionnaires were pre-tested among students, family members, and staff at the university college. The data was collected in the ski resort on various weekdays (including weekends). A total of 779 forms were completed in part or completely. After removing incomplete forms, we ended up with 549 complete forms for our analyses.
The survey consisted of questions about a range of factors related to alpine skiing. The main question in the survey regarding fast-track tickets is reproduced in Figure 1. In the question, we asked skiers how much extra, in addition to the day-pass price of 455 Norwegian kroner (NOK) , they would pay (in the interval NOK 0 to 100) for given scenarios of between 1- and 20-minute waiting time at the main lifts.
DOI: 10.17632/24c9mb6pf9
title: HEJ 2.1: High-energy resummation with vector bosons and next-to-leading logarithms

description: We present version 2.1 of the High Energy Jets (HEJ) event generator for hadron colliders. HEJ is a Monte Carlo generator for processes at high energies with multiple well-separated jets in the final state. To achieve accurate predictions, conventional fixed-order perturbative QCD is supplemented with an all-order resummation of large high-energy logarithms. The new version 2.1 now supports processes with final-state leptons originating from a charged or neutral vector boson together with multiple jets, in addition to processes available in earlier versions. Furthermore, the all-order resummation is extended to include an additional gauge-invariant class of subdominant logarithmic corrections. HEJ 2.1 can be obtained from https://hej.hepforge.org.
DOI: 10.17632/63h94cr3c4
title: Data for Appendix B: evaluating and ranking secondary data sources to be used in the Brazilian LCA database – “SICV Brasil”

description: Results of application of the proposed method for ranking of LCI datasets from a bibliographic survey with 57 Brazilian LCI datasets.
DOI: 10.17632/jvny8wwgfx
title: Data for: Elevation and cropping system as drivers of microclimate and abundance of soil macrofauna in coffee farmlands in mountainous ecologies
DOI: 10.17632/xgcf2pkb23
title: Data for: Correction of PRI for carotenoid pigment pools improves photosynthesis estimation across different irradiance and temperature conditions

description: PRI, environmental, pigments and photosynthesis data
DOI: 10.17632/3pp84yf7yf
title: Causal link between employment and renewable energy consumption: Evidence from Nigeria

description: Time series data on employment and renewable energy consumption in Nigeria for the period 1991-2014 used for causal analysis in this study. Employment is measured as proportion of the population aged 15 and above that are employed while renewable energy consumption is measured as percentage of total final energy consumption. Data is extracted from World Development Indicators published by World Bank Group.
DOI: 10.17632/p4dbr5kv9g
title: C. elegans wild strains SV

description: Structural variants dataset for 772 wild strains of Caenorhabditis elegans in vcf format.
DOI: 10.17632/xt5kbwz653
title: Topographic and Nanomechanical Mapping of Plutonium Surfaces

description: AFM measurements of dleta-phase plutonium and stainless steel surfaces performed in tapping and PeakForce™ QNM™ modalities.
DOI: 10.17632/9sv8k53tbv
title: Third Generation Sequencing Transforming Plant Genome Research: Current Trends and Challenges

description: Supplementary dataset for the review article "Third Generation Sequencing Transforming Plant Genome Research: Current Trends and Challenges" listing out the plant genomes sequenced through First generation, Second generation, Third Generation, and Hybrid sequencing technology.
DOI: 10.17632/bc3nvj7vsg
title: The supplementary data for “The NRF2/ID2 Axis in Vascular Smooth Muscle Cells: Novel Insights into the Interplay between Vascular Calcification and Aging”

description: This dataset constitutes supplementary data for the study on " The NRF2/ID2 Axis in Vascular Smooth Muscle Cells: Novel Insights into the Interplay between Vascular Calcification and Aging." It primarily includes a table: Differentially expressed genes (DEGs) identified in transcriptional profiles.
DOI: 10.17632/by5kgmy637
title: Comparative analysis of Presence-Absence gene Variations in five hard tick species: impact and functional considerations

description: Additional datasets supporting the "Comparative analysis of Presence-Absence gene Variations in five hard tick species: impact and functional considerations" paper. 
ABSTRACT
Tick species are vectors of harmful human and animal diseases and their expansion is raising concerns under the global environmental changes scenario. Ticks host and transmit bacteria and viruses making the understanding of host-pathogen molecular pathways critical to develop effective disease control strategies. Despite the considerable sizes and repeat contents of tick genomes, individual tick genomics is perhaps the most effective approach to reveal genotypic traits of interest. Presence-Absence gene Variations (PAVs) can contribute to individual differences within species, defining dispensable genes carried by subset of individuals only, possibly underpinning functional significance at individual or population-levels. We exploited 348 350 resequencing datasets of individual Dermacentor silvarum, Haemaphysalis longicornis, Ixodes persulcatus, Rhipicephalus microplus and Rhipicephalus sanguineus hard-tick specimens to reveal the extension of PAV and patterns of dispensable genes among individuals and, comparatively, between species. As resultCompared to the reference genomes, we traced 550-3,346 dispensable genes per species. We complemented the analysis by reconstructing the de-novo pangenome for these five tick species, resulting in 5.3-7 Mb of genomic regions not included in the respective reference genomes. Both the dispensable genes and the de-novo predicted genes mostly referred to transposable elements, indicating that PAV preferentially impacted mobile genetic elements in all these tick species.
DOI: 10.17632/4f6vgkrn75
title: Requirement for p62 acetylation in the aggregation of ubiquitylated proteins under nutrient stress

description: This is the original data for the paper "Requirement for p62 acetylation in the aggregation of ubiquitylated proteins under nutrient stress".
DOI: 10.17632/fw8txyrdmn
title: AJP - Renal_Ghajar-Rahimi et al.

description: Supporting files
DOI: 10.17632/cnffzf3j4v
title: Gaps and recommendations for clinical management of truncal acne from the Personalising Acne: Consensus of Experts (supplementary information)

description: Supplementary information to: Tan J, et al. Gaps and recommendations for clinical management of truncal acne from the Personalising Acne: Consensus of Experts. Submitted to JAAD International 2021. • Full list of consensus statements reached with voting results • Literature search methodology and references retrieved
DOI: 10.6084/m9.figshare.19245966.v2
title: PSLRI

description: PSLRI (Proteomic scRNA-seq ligand-receptor interaction) is a method to infer ligand-receptor interactions from combined scRNA-seq and proteomics datasets. This data is a Seurat object of the mouse whole-liver (CCl4-treated) scRNA-seq. This dataset is used as input for the PSLRI method described at the GitHub page: https://github.com/Schwabelab/PSLRI
DOI: 10.17632/n49ndf6x47
title: PURCHASING BEHAVIOR IN THE SAVINGS MARKET

description: PURCHASING BEHAVIOR IN THE SAVINGS MARKET
DOI: 10.17632/nfhfpcmt8r
title: MinFinder v2.0: An improved version of MinFinder

description: Abstract A new version of the “MinFinder” program is presented that offers an augmented linking procedure for Fortran-77 subprograms, two additional stopping rules and a new start-point rejection mechanism that saves a significant portion of gradient and function evaluations. The method is applied on a set of standard test functions and the results are reported. Title of program: MinFinder v2.0 Catalogue Id: ADWU_v2_0 Nature of problem A multitude of problems in science and engineering are often reduced to minimizing a function of many variables. There are instances that a local optimum does not correspond to the desired physical solution and hence the search for a better solution is required. Local optimization techniques can be trapped in any local minimum. Global optimization is then the appropriate tool. For example, solving a non - linear system of equations via optimization, one may encounter many local minima that do no ... Versions of this program held in the CPC repository in Mendeley Data ADWU_v1_0; MinFinder; 10.1016/j.cpc.2005.10.001 ADWU_v2_0; MinFinder v2.0; 10.1016/j.cpc.2008.04.016 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/pxngkh7krj
title: DSQSS: Discrete Space Quantum Systems Solver

description: The Discrete Space Quantum Systems Solver (DSQSS) is a program package for solving quantum many-body problems defined on lattices. The DSQSS is based on the quantum Monte Carlo method in Feynman’s path integral representation and covers a broad range of problems using flexible input files that define arbitrary unit cells in arbitrary dimensions and arbitrary matrix elements representing the interactions among an arbitrary number of degrees of freedom. Finite temperature calculations of quantum spin and the Bose–Hubbard models can be performed by specifying parameters such as the number of dimensions, the lattice size, coupling constants, and temperature. The present paper details the use of DSQSS and presents a number of applications thereof.
DOI: 10.17632/y47z87jhht
title: Banglish Food Review Data

description: We have collected Banglish Food Review text data from various websites and social media platforms for sentiment analysis.
DOI: 10.17632/tchv5fgnrz
title: Mind over chronic pain: A meta-analysis of cognitive restructuring in chronically ill adults

description: We conducted a meta-analysis, compiling data from numerous studies to investigate the effect of cognitive restructuring on chronic pain intensity. The data, organized in an Excel spreadsheet, includes the following variables:

• Study ID: Author and publication year.
• Treatment Data: Pretreatment and posttreatment means, standard deviations, and sample sizes for both the control and experimental groups.
• Effect direction: Indicates whether the effect was positive or negative.
• Type of intervention: Whether the intervention was individual or group-based.
• Intervention protocol: Whether cognitive restructuring was used alone or combined with additional elements. 
• Additional elements: Specifies the elements added to cognitive restructuring.
• Type of therapists: Whether the intervention was delivered by medical staff or by psychologists exclusively/in the team.
• Type of control group: Specifies if the control group was a placebo or a no intervention/waiting list group. 
• Control condition: Specifies the control group used in the studies.
• Session Details: Number of sessions, duration per session, and total. 
• Demographic Information: Percentage of females, chronic pain condition, mean age, and country.
• Assessment Tools: Tools used for assessing pain. 
• Pain measurement: Whether the measurement was single-item or multi-item.
• Study quality: Total study quality score based on version 2 of the Cochrane risk-of-bias tool (RoB 2).

The meta-analysis revealed that cognitive restructuring has a significant large effect size on reducing chronic pain intensity. This suggests that cognitive restructuring is an effective intervention for managing chronic pain in adults with chronic conditions. Statistically significant differences were found based on sex and study quality. The effect size was less pronounced among females, and higher-quality studies showed more substantial effects. While sex and study quality significantly influenced the effect size, other potential moderators (type of intervention, intervention protocol, type of therapists, type of control group, age, and pain measurement) did not significantly impact the effect size.
DOI: 10.17632/yxj2mtmthd
title: TLR3, TLR7, and TLR8 genes expression in COVID-19 patients

description: The prognosis of COVID-19 could influence by innate immune sensors such as toll-like receptors (TLRs). The purpose of this data was to investigate TLR3, 7, and 8 expression levels in COVID-19 patients and their relationship to outcome of disease. 75 confirm COVID-19 were included sequentially and sepa- rated into three groups: mild, severe, and critical. Peripheral blood mononuclear cells were isolated from the whole blood, and RNA was then extracted. The qRT-PCR technique was used to examine the expression of TLR3, TLR7, and TLR8 genes. The patients’ average ages were 52.69 1.9. 13 of the 25 individuals in each group were male. TLR3 (p &lt; 0.001), TLR7 (p &lt; 0.001), and TLR8 (p &lt; 0.001) expression levels were considerably greater in COVID-19 patients compared to the control group. The findings also showed that individuals with critical and severe COVID-19 disease had signifi- cantly greater TLR7 and TLR8 gene expression levels than patients in mild stage of disease (p &lt; 0.05). The data showed a significant difference (p = 0.01) in the TLR3 transcript levels between critical and mild COVID-19 patients. Furthermore, male severe (p = 0.02) and critical (p = 0.008) patients had significantly higher TLR8 expression levels than female patients in terms of gender. TLR3 (p = 0.2) and TLR7 (p = 0.08) transcripts were more elevated in males than females, but not significantly.
DOI: 10.6084/m9.figshare.12090645.v1
title: Silent Myelin-Weighted MR Imaging

description: Region-of-Interest data and MNI space mean/CoV images
DOI: 10.6084/m9.figshare.25566006.v1
title: High-throughput DNA sequencing data for <i>Mergus australis</i> (Av1583)

description: High-throughput DNA sequencing data for the miuweka / Auckland Island merganser, <i>Mergus australis</i> (Av1583). Sequenced on an Illumina MiSeq using 2 × 150 bp (300 cycle, paired-end) sequencing chemistry at the School of Agriculture, Food, and Wine, University of Adelaide.Reference: Rawlence et al. (2024) "Ancient mitogenomes reveal evidence for the Late Miocene dispersal of mergansers to the Southern Hemisphere", Zoological Journal of the Linnean Society (https://doi.org/10.1093/zoolinnean/zlae040).
DOI: 10.17632/5gbkngkff5
title: Social Distancing, Social Environment and Everyday Memory

description: Collected during different points where social distancing was in place internationally. Data was obtained on an opportunity sample basis and through a research participation pool. The research question concerned whether the restricted social environment was associated different psychological factors. More specifically:
1. The first research questions concerned whether giving and receiving social support provide different information in explaining how loneliness relates to life satisfaction. It is possible that the difference in ratings for receiving and giving of social support, could be explained by reciprocity. 
2. The second research questions concerned whether social relatedness mediated the relationship between loneliness and everyday working memory errors; and whether the relationships to everyday memory errors were moderated by negative affect. 
For more information about the measures used pleased get in touch with the contributor.
DOI: 10.17632/t8sxbj4gpw
title: PacBio amplicon sequencing of Cordyceps species

description: Data of high-throughput ITS-D1/D2 LSU amplicon sequencing, using double barcodes.
DOI: 10.6084/m9.figshare.25555899.v1
title: Mill B assemblies

description: Fasta files of assemblies of samples from Mill B.Assemblies done using IDBA-UD v.1.1.3: MillB_1170726-idbaud-contigs-prefix-formatted-only.fa, MillB_1180117-idbaud-contigs-prefix-formatted-only.fa, MillB-coassembly_idbaud_contigs-prefix-formatted-only.faAssemblies done using MEGAHIT v. 1.2.9: MillB_1170726-mhg-contigs-prefix-formatted-only.fa, MillB_1180117-mgh-contigs-prefix-formatted-only.fa, MillB-coassembly-mgh-contigs-prefix-formatted-only.faAssemblies done using SPAdes v. 3.12.0: MillB-msp-coassembly-contigs-prefix-formatted-only.fa, MillB_1170726msp_contigs.fa
DOI: 10.17632/6pw5p88fcz
title: Justicia transicional y derechos humanos: un proceso necesario después de los Acuerdos de paz

description: This reflective paper explores El Salvador's process from the Peace Accords of 1992 when the country came together to put an end to the civil conflict. Transitional justice plays an important role in the aftermath trying to rebuild the country and giving a sense of justice to the victims. This paper tries to discuss the many theories around transitional justice, accomplishments and the many challenges to come.
DOI: 10.17632/dht8zxxv84
title: Examining the Environmental Kuznets Curve in Vietnam: some new evidence

description: This dataset includes carbon dioxide emissions, economic growth, energy consumption, and urbanization in Vietnam for the period from 1977 to 2019. The secondary data was compiled from different sources such as Our World in Data (CO2, Energy consumption), Euromonitor Database (Economic Growth), and World Development Indicators (urbanization). All description was shown in the dataset. The URL and the accessed date were presented in the manuscript's reference
DOI: 10.6084/m9.figshare.1164360.v1
title: Calcifications of the thoracic aorta on extended non-contrast-enhanced cardiac CT

description: This spreadsheet contains measurements of thoracic aorta calcification (TAC) in 970 asymptomatic patients from an article titled "Calcifications of the thoracic aorta on extended non-contrast-enhanced cardiac CT" and published in PlusONE. Calcifications were quantified using the Agatston method. The thoracic aorta was divided into 5 segments as describes in the publication. The scan covered the aortic arch.The number of calcifications and the cumulative Agatston score are informed per segment. The length of each segment is informed in cm. Risk factors as hypertension (HTA), hypercholesterolemia (HCT), smoking status, diabetes and the presence of coronary artery calcium (CAC) and are also included for each patient.