cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9iplh58
title: Data on dietary preference by brown treesnakes on Guam

description: These data address experimental evaluations of dietary preference by captive brown treesnakes on Guam. Snakes were collected from the wild in areas with birds present and in areas without birds present 2018?2019. Snakes were then run through preference trials during which they were offered first live lures (mouse and finch) in snake traps on opposite sides of the arena. On the second night, snakes were offered dead carrion (baits) of each prey type (mouse, chicken chick) equal to 30% of their mass. Choices were monitored overnight using game cameras and then transcribed the following day. Individuals were classified as BIRD or NOBIRD snakes based on whether they had birds in their gut contents at the time of capture. Interest in bird or mouse prey was quantified by which trap they entered (mouse or finch), number of times they investigated each trap, which bait they ate (mouse or chick) and number of times they investigated the bait or mouse.
DOI: 10.6084/m9.figshare.23959293
title: Table of raw de-identified data

description: This is the raw data for a randomized placebo controlled cross over clinical trial evaluating if resveratrol supplementation improved brachial artery flow mediated dilation in patients with chronic kidney disease.
DOI: 10.6084/m9.figshare.24460814
title: Data S1: Full species-level data from The macroevolutionary dynamics of mammalian sexual size dimorphism

description: Species-level data used in this study
DOI: 10.6084/m9.figshare.24460814.v1
title: Data S1: Full species-level data from The macroevolutionary dynamics of mammalian sexual size dimorphism

description: Species-level data used in this study
DOI: 10.6084/m9.figshare.24460820
title: Data S2: Mating system data and sourcing from The macroevolutionary dynamics of mammalian sexual size dimorphism

description: Additional information on mating system scores
DOI: 10.6084/m9.figshare.24460820.v1
title: Data S2: Mating system data and sourcing from The macroevolutionary dynamics of mammalian sexual size dimorphism

description: Additional information on mating system scores
DOI: 10.6084/m9.figshare.24460865
title: Fracture distribution along open folds in Southern Tunisia: Implications for naturally fractured reservoirs

description: Field fracture measurements. Field fracture measurements from the Tebaga of Medenine and Kirchaou.
DOI: 10.6084/m9.figshare.24460865.v1
title: Fracture distribution along open folds in Southern Tunisia: Implications for naturally fractured reservoirs

description: Field fracture measurements. Field fracture measurements from the Tebaga of Medenine and Kirchaou.
DOI: 10.6084/m9.figshare.24460871
title: Fracture distribution along open folds in Southern Tunisia: Implications for naturally fractured reservoirs

description: Field bedding measurements. Field bedding measurements from the Tebaga of Medenine.
DOI: 10.6084/m9.figshare.24460871.v1
title: Fracture distribution along open folds in Southern Tunisia: Implications for naturally fractured reservoirs

description: Field bedding measurements. Field bedding measurements from the Tebaga of Medenine.
DOI: 10.6084/m9.figshare.24460874
title: Fracture distribution along open folds in Southern Tunisia: Implications for naturally fractured reservoirs

description: Aperture modelling results. Geometry of the 2D hybrid model and results of the aperture modelling.
DOI: 10.6084/m9.figshare.24460874.v1
title: Fracture distribution along open folds in Southern Tunisia: Implications for naturally fractured reservoirs

description: Aperture modelling results. Geometry of the 2D hybrid model and results of the aperture modelling.
DOI: 10.5281/zenodo.10054958
title: Dataset: Dyslipidemia and Cardiovascular Disease Among Childhood Cancer Survivors: A St. Jude Lifetime Cohort Report
DOI: 10.5281/zenodo.10054957
title: Dataset: Dyslipidemia and Cardiovascular Disease Among Childhood Cancer Survivors: A St. Jude Lifetime Cohort Report
DOI: 10.6084/m9.figshare.24460510
title: <b>Comparative analyses of mitogenomes in the social bees insights into evolution of long inverted repeats in the Meliponini</b>

description: he insect mitogenome is typically a compact circular molecule with highly conserved gene contents. Nonetheless, mitogenome structure variations have been reported in specific taxa, and gene rearrangements, usually the tRNAs, occur in different lineages. Because synapomorphies of mitogenomes organization can provide information for phylogenetic inferences, comparative analyses of mitogenomes have been given increasing attention. However, most studies use a very few species to represent the whole genus, tribe, family, or even order, overlooking potential variations at lower taxonomic levels, which might lead to some incorrect inferences. To provide new insights into mitogenome organization patterns and their implications for phylogenetic inference, this study conducted comparative analyses for mitogenomes of three social bees tribes (Meliponini, Bombini, and Apini) based on the phylogenetic framework with denser taxonomic sampling at the species and population levels. Comparative analyses reveal that mitogenomes of Apini and Bombini are the typical type, while thoses of Meliponini show diverse variations in mitogenome size and organization. Large inverted repeat (IR) regions cause significant gene rearrangements of protein coding genes (PCGs) and rRNAs in Indo-Malay/Australian stingless bee species, and are estimated to have occurred once in the common ancestor. Molecular evolution analyses showed that lineages with IRs have lower estimated d<sub>N</sub>/d<sub>S</sub> ratios for PCGs than lineages without IRs, indicating the potential effect of IRs on evolution of mitochondrial genes. Another pattern of gene rearrangements of PCGs and rRNAs was found in a monophyletic lineage within the Neotropical clade, and are also estimated to have occurred once in their common ancestor. The finding of IRs and different patterns of gene rearrangements support the idea that Meliponini is a hotspot in mitogenome evolution, and more comprehensive sampling is needed to further investigate the pattern and formation mechanism of their evolution in the future. Unlike conserved PCGs and rRNAs whose rearrangements were found only in the mentioned lineages within Meliponini, tRNA rearrangements are common across all three tribes, and are significant even at the species level, indicating that comprehensive sampling is needed to fully understand the patterns of tRNA rearrangements, and their implications for phylogenetic inference.
DOI: 10.6084/m9.figshare.24460510.v2
title: <b>Comparative analyses of mitogenomes in the social bees insights into evolution of long inverted repeats in the Meliponini</b>

description: he insect mitogenome is typically a compact circular molecule with highly conserved gene contents. Nonetheless, mitogenome structure variations have been reported in specific taxa, and gene rearrangements, usually the tRNAs, occur in different lineages. Because synapomorphies of mitogenomes organization can provide information for phylogenetic inferences, comparative analyses of mitogenomes have been given increasing attention. However, most studies use a very few species to represent the whole genus, tribe, family, or even order, overlooking potential variations at lower taxonomic levels, which might lead to some incorrect inferences. To provide new insights into mitogenome organization patterns and their implications for phylogenetic inference, this study conducted comparative analyses for mitogenomes of three social bees tribes (Meliponini, Bombini, and Apini) based on the phylogenetic framework with denser taxonomic sampling at the species and population levels. Comparative analyses reveal that mitogenomes of Apini and Bombini are the typical type, while thoses of Meliponini show diverse variations in mitogenome size and organization. Large inverted repeat (IR) regions cause significant gene rearrangements of protein coding genes (PCGs) and rRNAs in Indo-Malay/Australian stingless bee species, and are estimated to have occurred once in the common ancestor. Molecular evolution analyses showed that lineages with IRs have lower estimated d<sub>N</sub>/d<sub>S</sub> ratios for PCGs than lineages without IRs, indicating the potential effect of IRs on evolution of mitochondrial genes. Another pattern of gene rearrangements of PCGs and rRNAs was found in a monophyletic lineage within the Neotropical clade, and are also estimated to have occurred once in their common ancestor. The finding of IRs and different patterns of gene rearrangements support the idea that Meliponini is a hotspot in mitogenome evolution, and more comprehensive sampling is needed to further investigate the pattern and formation mechanism of their evolution in the future. Unlike conserved PCGs and rRNAs whose rearrangements were found only in the mentioned lineages within Meliponini, tRNA rearrangements are common across all three tribes, and are significant even at the species level, indicating that comprehensive sampling is needed to fully understand the patterns of tRNA rearrangements, and their implications for phylogenetic inference.
DOI: 10.6084/m9.figshare.24460510.v1
title: <b>Comparative analyses of mitogenomes in the social bees insights into evolution of long inverted repeats in the Meliponini</b>

description: he insect mitogenome is typically a compact circular molecule with highly conserved gene contents. Nonetheless, mitogenome structure variations have been reported in specific taxa, and gene rearrangements, usually the tRNAs, occur in different lineages. Because synapomorphies of mitogenomes organization can provide information for phylogenetic inferences, comparative analyses of mitogenomes have been given increasing attention. However, most studies use a very few species to represent the whole genus, tribe, family, or even order, overlooking potential variations at lower taxonomic levels, which might lead to some incorrect inferences. To provide new insights into mitogenome organization patterns and their implications for phylogenetic inference, this study conducted comparative analyses for mitogenomes of three social bees tribes (Meliponini, Bombini, and Apini) based on the phylogenetic framework with denser taxonomic sampling at the species and population levels. Comparative analyses reveal that mitogenomes of Apini and Bombini are the typical type, while thoses of Meliponini show diverse variations in mitogenome size and organization. Large inverted repeat (IR) regions cause significant gene rearrangements of protein coding genes (PCGs) and rRNAs in Indo-Malay/Australian stingless bee species, and are estimated to have occurred once in the common ancestor. Molecular evolution analyses showed that lineages with IRs have lower estimated d<sub>N</sub>/d<sub>S</sub> ratios for PCGs than lineages without IRs, indicating the potential effect of IRs on evolution of mitochondrial genes. Another pattern of gene rearrangements of PCGs and rRNAs was found in a monophyletic lineage within the Neotropical clade, and are also estimated to have occurred once in their common ancestor. The finding of IRs and different patterns of gene rearrangements support the idea that Meliponini is a hotspot in mitogenome evolution, and more comprehensive sampling is needed to further investigate the pattern and formation mechanism of their evolution in the future. Unlike conserved PCGs and rRNAs whose rearrangements were found only in the mentioned lineages within Meliponini, tRNA rearrangements are common across all three tribes, and are significant even at the species level, indicating that comprehensive sampling is needed to fully understand the patterns of tRNA rearrangements, and their implications for phylogenetic inference.
DOI: 10.21227/vjvg-4z71
title: Fine-grained link traffic-delay datasets

description: The datasets consists of the traffic-delay pairs collected in a real network.  For each link connecting two switches, we measured the link delay associated with 1000 evenly-divided traffic test points. To obtain the traffic-delay pairs at a traffic test point of a link, the traffic generation machine, connected to the starting switch of the link, firstly sent data packets to the traffic generation machine, connected to the ending switch of the link, at the corresponding rate (i.e., the traffic value of the  traffic test point). Then the delay measurement machine, connected to the starting switch of the link, sent probe packets to the delay measurement machine connected to the ending switch of the link.
DOI: 10.25416/edgehill.24456367
title: Arts for the Blues: Theme Tables for Stakeholder and Trainee Events

description: This dataset is raw data from the AHRC-funded project titled: 'Arts for the Blues: Towards integrating the use of the arts in healthcare and cultural settings to tackle depression and improve wellbeing in the North West of England'.It consists of responses to questions asked to stakeholders and trainees at workshops, focus groups and training events with healthcare and cultural organisations and with target beneficiaries from our Patient and Public Involvement group. The data is linked to an article submitted to PLOS ONE: 'Developing a Strategy to Scale up Place-Based Arts Initiatives that Support Mental Health and Wellbeing: A Realist Evaluation of ‘Arts for the Blues’.' A link to the article will be provided when it is published.
DOI: 10.25416/edgehill.24456367.v1
title: Arts for the Blues: Theme Tables for Stakeholder and Trainee Events

description: This dataset is raw data from the AHRC-funded project titled: 'Arts for the Blues: Towards integrating the use of the arts in healthcare and cultural settings to tackle depression and improve wellbeing in the North West of England'.It consists of responses to questions asked to stakeholders and trainees at workshops, focus groups and training events with healthcare and cultural organisations and with target beneficiaries from our Patient and Public Involvement group. The data is linked to an article submitted to PLOS ONE: 'Developing a Strategy to Scale up Place-Based Arts Initiatives that Support Mental Health and Wellbeing: A Realist Evaluation of ‘Arts for the Blues’.' A link to the article will be provided when it is published.
DOI: 10.5287/ora-b7dw9pmqd
title: Chaos in a bacterial stress response

description: This material relates to the article 'Chaos in a bacterial stress response' by Choudhary et al. The quantitative microscopy data collected from the microfluidics imaging experiments were processed using BACMMAN software (Ollion et al. Nat Protoc. 2019, 3144-3161. doi: 10.1038/s41596-019-0216-9.) and then processed using custom Python code. This folder contains output files obtained from BACMMAN for all experiments described in the article by Choudhary et al. Details of the data collection and analysis procedures can be found in the accompanying article.
DOI: 10.57745/j9jzu6
title: 16S rRNA sequences of human milk isolates.tab

description: 16S rRNA sequences of the 84 human milk isolates used in the study
DOI: 10.5517/ccdc.csd.cc2gphd2
title: CCDC 2284774: Experimental Crystal Structure Determination

description: Related Article: Pauline Schiltz, Nicolas Casaretto, Sophie Bourcier, Audrey Auffrant, Corinne Gosmini|2023|Dalton Trans.|52|14859|doi:10.1039/D3DT02441E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gphf3
title: CCDC 2284775: Experimental Crystal Structure Determination

description: Related Article: Pauline Schiltz, Nicolas Casaretto, Sophie Bourcier, Audrey Auffrant, Corinne Gosmini|2023|Dalton Trans.|52|14859|doi:10.1039/D3DT02441E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gphj6
title: CCDC 2284778: Experimental Crystal Structure Determination

description: Related Article: Pauline Schiltz, Nicolas Casaretto, Sophie Bourcier, Audrey Auffrant, Corinne Gosmini|2023|Dalton Trans.|52|14859|doi:10.1039/D3DT02441E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gqnvq
title: CCDC 2285904: Experimental Crystal Structure Determination

description: Related Article: Huangjie Lu, Jingqi Ma, Junpu Yang, Huiliang Hou, Jiacheng Lu, Jian-Qiang Wang, Yaxing Wang, Jian Lin|2023|Chem.Commun.|59|12617|doi:10.1039/D3CC03824F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2grf5v
title: CCDC 2286627: Experimental Crystal Structure Determination

description: Related Article: Ali Abou Taka, Joseph E. Reynolds, Neil C. Cole-Filipiak, Mohana Shivanna, Christine J. Yu, Patrick Feng, Mark D. Allendorf, Krupa Ramasesha, Vitalie Stavila, Laura M. McCaslin|2023|Phys.Chem.Chem.Phys.(PCCP)|25|27065|doi:10.1039/D3CP03720G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2grf6w
title: CCDC 2286628: Experimental Crystal Structure Determination

description: Related Article: Ali Abou Taka, Joseph E. Reynolds, Neil C. Cole-Filipiak, Mohana Shivanna, Christine J. Yu, Patrick Feng, Mark D. Allendorf, Krupa Ramasesha, Vitalie Stavila, Laura M. McCaslin|2023|Phys.Chem.Chem.Phys.(PCCP)|25|27065|doi:10.1039/D3CP03720G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g6qq4
title: CCDC 2270586: Experimental Crystal Structure Determination

description: Related Article: Rajrani Narvariya, Adimulam Harinath, Archana Jain, Tarun K. Panda|2024|Inorg.Chim.Acta|559|121781|doi:10.1016/j.ica.2023.121781
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d0pty
title: CCDC 2205210: Experimental Crystal Structure Determination

description: Related Article: Ying-Jun Chen, Chang-Xun Dou, Pei-Pei Yin, Jun-Ting Chen, Xiao-Gang Yang, Bo Li, Lu-Fang Ma, Li-Ya Wang|2023|Dalton Trans.|52|13872|doi:10.1039/D3DT01869E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d0pvz
title: CCDC 2205211: Experimental Crystal Structure Determination

description: Related Article: Ying-Jun Chen, Chang-Xun Dou, Pei-Pei Yin, Jun-Ting Chen, Xiao-Gang Yang, Bo Li, Lu-Fang Ma, Li-Ya Wang|2023|Dalton Trans.|52|13872|doi:10.1039/D3DT01869E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fjk8t
title: CCDC 2250236: Experimental Crystal Structure Determination

description: Related Article: Wei Xie, Yuan Yuan, Jia-Jun Wang, Shu-Ran Zhang, Guang-Juan Xu, Nan Jiang, Yan-Hong Xu, Zhong-Min Su|2023|Dalton Trans.|52|14852|doi:10.1039/D3DT01783D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34740/kaggle/dsv/6836831
title: Mahanagar Yatayat Transport Dataset
DOI: 10.34740/kaggle/dsv/6836850
title: MoviesDatasets
DOI: 10.3886/e188761v1-142721
title: Data and Code for: Hormone Therapy, Suicidal Risk, and Transgender Youth in the U.S.

description: This study uses the 2015 U.S. Transgender Survey to test how initiation of hormone replacement therapy (HRT) affects the risk of attempting suicide among transgender individuals. We constructed a retrospective panel and employed a stacked event study design to demonstrate that HRT is associated with a substantially lower risk of suicide attempt. The average treatment effect on the treated is a decrease of 5.7 percentage points in the risk of ever attempting suicide if HRT started between the ages of 14 and 17, which amounts to a 14.4% reduction in the risk of attempting suicide relative to the pretreatment mean.
DOI: 10.15151/esrf-es-1304274089
title: structure of light activated water

description: structure of light activated water
DOI: 10.5519/qd.6bbcbjwz
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (310 records)
DOI: 10.5519/qd.kvp5hbcd
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (367 records)
DOI: 10.5281/zenodo.10000429
title: RNAseq of PBMC and sorted subpopulations (CD4, CD8, CD14, CD19) from children

description: The CLUSTER consortium (https://www.clusterconsortium.org.uk/) performed RNA sequencing on bulk and sorted CD4, CD8, CD14 and CD19 cells from the peripheral blood of patients with juvenile idiopathic arthritis and healthy controls. These data were used to examine performance of algorithms to impute cell subset specific expression from the mixed cell population (PBMC). Information and processed read counts are provided here for reproducibility purposes. Raw data (FASTQ) and clinical characteristics will be released when the primary outcome paper from the study is published.