cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3610346_d6
title: Additional file 5: of Systematic characterization of novel lncRNAs responding to phosphate starvation in Arabidopsis thaliana

description: Protein-coding genes and their (anti-)co-expressed antisense lncRNAs. This file contains all (anti-)co-expressed genes and their antisense lncRNAs pairs. (XLSX 69 kb)
DOI: 10.6084/m9.figshare.c.3610346_d5
title: Additional file 3: of Systematic characterization of novel lncRNAs responding to phosphate starvation in Arabidopsis thaliana

description: Coordinates of novel lncRNAs in RefFlat format. This file contains the detailed coordinates of each novel lncRNAs, including the start and end positions of exons. (XLSX 136 kb)
DOI: 10.6084/m9.figshare.c.3610346_d3
title: Additional file 4: of Systematic characterization of novel lncRNAs responding to phosphate starvation in Arabidopsis thaliana

description: Differentially expressed protein-coding transcripts and lncRNAs under Pi starvation. This file contains all Pâ   regulated protein-coding transcripts and lncRNAs. (XLSX 1710 kb)
DOI: 10.6084/m9.figshare.c.3610346_d4
title: Additional file 7: of Systematic characterization of novel lncRNAs responding to phosphate starvation in Arabidopsis thaliana

description: LncRNAs and protein-coding genes with P1BS motif at promoters. This files contains lncRNAs and protein-coding genes whose promoter regions contain P1BS motif. (XLSX 107 kb)
DOI: 10.6084/m9.figshare.c.3610346_d2
title: Additional file 6: of Systematic characterization of novel lncRNAs responding to phosphate starvation in Arabidopsis thaliana

description: Photosynthesis-related and Pâ   repressed genes in roots and shoots. This file contains genes that are regulated by Pi starvation and involved in photosynthesis pathway. (XLSX 33 kb)
DOI: 10.15468/dl.tmrp42
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cheilopogon altipennis (Valenciennes, 1847)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032229-241126133413365/datasets/export for details.
DOI: 10.5281/zenodo.14421644
title: O'ZBEK XALQIGA XOS SAXOVATPESHALIKNING MA'NAVIY MEZONLARI
DOI: 10.5281/zenodo.14421645
title: O'ZBEK XALQIGA XOS SAXOVATPESHALIKNING MA'NAVIY MEZONLARI
DOI: 10.6084/m9.figshare.c.3610151_d1
title: Additional file 1: of Long noncoding RNA C17orf91 is a potential prognostic marker and functions as an oncogene in ovarian cancer

description: Primers used in present study. (XLS 17Â kb)
DOI: 10.15468/dl.uxpdmr
title: Occurrence Download

description: A dataset containing 24152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Cyanocompsa parellina (Bonaparte, 1850)"
 ]
}

 The dataset includes 24152 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032230-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3609995_d8
title: Additional file 4: Table S3. of A bulk segregant transcriptome analysis reveals metabolic and cellular processes associated with Orange allelic variation and fruit Î˛-carotene accumulation in melon fruit

description: List of genes included in the significant SNP area. (XLSX 19Â kb)
DOI: 10.6084/m9.figshare.c.3609995_d6
title: Additional file 6: Table S5. of A bulk segregant transcriptome analysis reveals metabolic and cellular processes associated with Orange allelic variation and fruit Î˛-carotene accumulation in melon fruit

description: List of genes exhibited significant up or down regulation in two fruit developmental stages. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3609995_d7
title: Additional file 3: Table S2. of A bulk segregant transcriptome analysis reveals metabolic and cellular processes associated with Orange allelic variation and fruit β-carotene accumulation in melon fruit

description: SNP differentiating between bulks. *: same base as reference genome; SNP type: M, mismatch; I, insertion; D, deletion; AA change: SNP causes amino acid changes; for example, R108H means that SNP at CDS position 108 causes amino acid changes from R to H (“R” in green bulk to “H” in orange bulk). (XLSX 16 kb)
DOI: 10.7274/27949077
title: Frequency Combs in Injected Terahertz Ring Quantum Cascade Lasers

description: Optical frequency combs are laser sources characterized by a series of discrete, equally spaced lines in the frequency domain. Integrated, chip-scale frequency combs have a wide range of applications, including communications, frequency synthesis, optical ranging, and gas spectroscopy. In the terahertz (THz) and mid-infrared (MIR) regions, quantum cascade lasers (QCLs) have emerged as the leading compact sources for generating these frequency combs. Of particular interest are ring QCLs, which have shown promise in generating dissipative Kerr solitons (DKS) — ultra-short pulses that can travel through dispersive, nonlinear media while preserving their shape and amplitude. These pulsed sources in the THz range are valuable for applications such as nonlinear spectroscopy, which requires high optical intensities, and ranging applications, which benefit from short pulse durations.

In this work, we demonstrate frequency comb formation in ring terahertz QCLs through the injection of light from a distributed feedback (DFB) laser. The DFB laser’s design frequency is selected to match the resonant modes of the ring cavity, centered near 3.3 THz, with light injected into the ring QCL via a bus waveguide. By tuning the power and frequency of the injected light, we show that comb formation within the ring cavity can be selectively initiated and controlled. Numerical simulations indicate that this comb is primarily frequency-modulated, with the optical injection acting as a trigger for comb generation.

Our study also highlights the potential of the ring QCL to serve as a filter, effectively shaping the output of the DFB QCL. Additionally, we conducted a similar experiment using a racetrack structure instead of a ring and observed comparable phenomena. This approach shows great promise for applications in terahertz photonic integrated circuits, where waveguide couplers efficiently facilitate the injection and extraction of radiation from the ring cavity. These findings open new possibilities for generating novel comb states in the terahertz range, such as frequency-modulated waves and solitons, thereby expanding the functionality and application scope of THz QCLs in integrated photonics.
DOI: 10.6084/m9.figshare.c.3609857_d1
title: Additional file 2: Figure S1. of Intermittent energy restriction induces changes in breast gene expression and systemic metabolism

description: Changes in gene expression due to CER are also changed in approximately half of the IER participants, but are not clearly correlated with lymphocytes. The heatmap colours show log2 fold change in gene expression of the baseline samples relative to the post-diet samples (green = downregulated, red = upregulated, black = no change). The arrows show subjects predicted to have an energy restriction (orange = CER, blue = IER) or unchanged profiles (grey). Similar results were obtained when considering all probe sets on the array. (XLSX 268 kb)
DOI: 10.6084/m9.figshare.c.3609818_d1
title: Additional file 1: of Biodegradation of lignin and nicotine with white rot fungi for the delignification and detoxification of tobacco stalk

description: The original data about the lignocellulosic content and enzyme activities detection. (XLS 3055 kb)
DOI: 10.15468/dl.qny8u2
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Living Specimen",
 "Country is Thailand",
 "TaxonKey is Somrania flavida D.J.Middleton & Triboun"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032231-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3609620_d12
title: Additional file 3: Table S3. of RNA-seq-based digital gene expression analysis reveals modification of host defense responses by rice stripe virus during disease symptom development in Arabidopsis

description: DEGs expressed at 21 dpi. (XLSX 78Â kb)
DOI: 10.6084/m9.figshare.c.3609620_d10
title: Additional file 5: Table S5. of RNA-seq-based digital gene expression analysis reveals modification of host defense responses by rice stripe virus during disease symptom development in Arabidopsis

description: Down-regulated DEGs involved in defense response at 21 dpi. (XLSX 54Â kb)
DOI: 10.6084/m9.figshare.c.3609620_d11
title: Additional file 9: Table S9. of RNA-seq-based digital gene expression analysis reveals modification of host defense responses by rice stripe virus during disease symptom development in Arabidopsis

description: DEGs involved in protein phosphorylation at 21 dpi. (XLSX 52Â kb)
DOI: 10.15468/dl.marveu
title: Occurrence Download

description: A dataset containing 206 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Muraenesox cinereus (Forsskål, 1775)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 206 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032232-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25810/vdpk-2272
title: FIRED Greece Nov 2000 - July 2024

description: This is event-level polygons for the fire event delineation (FIRED) product for GREECE from November 2000  to July 2024. It is derived from the MODIS MCD64A1 burned area product (see https://lpdaac.usgs.gov/products/mcd64a1v061/ for more details). The MCD64A1 is a monthly raster grid of estimated burned dates. Firedpy (https://github.com/earthlab/firedpy) is an algorithm that converts these rasters into events by stacking the entire time series into a spatial-temporal data cube, then uses an algorithm to assign event identification numbers to pixels that fit into the same 3-dimensional spatial temporal window. This particular dataset was created using a spatial parameter of 1 pixels and 5 days. Daily polygons are included and the event identification numbers are the same for both files, but the event-level product has only single polygons for each entire event, while the daily product has separate polygons for each date per event. See the associated paper for more details on the methods and more:

Balch, J.K.; St. Denis, L.A.; Mahood, A.L.; Mietkiewicz, N.P.; Williams, T.M.; McGlinchy, J.; Cook, M.C. FIRED (Fire Events Delineation): An Open, Flexible Algorithm and Database of US Fire Events Derived from the MODIS Burned Area Product (2001–2019). Remote Sens. 2020, 12, 3498. https://doi.org/10.3390/rs12213498
DOI: 10.6084/m9.figshare.c.3609548_d5
title: Additional file 11: Table S6. of iTRAQ-based quantitative proteomic analysis reveals the distinct early embryo myofiber type characteristics involved in landrace and miniature pig

description: Complete list of significantly changed myogenic DEPs identified by iTRAQ between LR and WZS at 4 stages. (XLSX 45Â kb)
DOI: 10.6084/m9.figshare.c.3609548_d4
title: Additional file 10: Table S5. of iTRAQ-based quantitative proteomic analysis reveals the distinct early embryo myofiber type characteristics involved in landrace and miniature pig

description: Detail of COG identified by iTRAQ. (XLS 7958Â kb)
DOI: 10.6084/m9.figshare.c.3609548_d1
title: Additional file 9: Table S4. of iTRAQ-based quantitative proteomic analysis reveals the distinct early embryo myofiber type characteristics involved in landrace and miniature pig

description: Terms from the muscle process ontology with p-value as good or better than 1 between LR and WZS at 4 stages. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3609548_d2
title: Additional file 8: Table S3. of iTRAQ-based quantitative proteomic analysis reveals the distinct early embryo myofiber type characteristics involved in landrace and miniature pig

description: Detail of GO, GO2proteins and protein2GO identified by iTRAQ. (XLS 3474Â kb)
DOI: 10.6084/m9.figshare.c.3609371_d3
title: Additional file 1: Table S1. of Application of whole genome re-sequencing data in the development of diagnostic DNA markers tightly linked to a disease-resistance locus for marker-assisted selection in lupin (Lupinus angustifolius)

description: Genotyping of sequence-defined SNP markers and InDel markers from the genetic linkage map [38] on 10 commercial cultivars through genome sequencing and re-sequencing in Lupinus angustifolius. (XLSX 475 kb)
DOI: 10.6084/m9.figshare.c.3609371_d2
title: Additional file 2: Table S2. of Application of whole genome re-sequencing data in the development of diagnostic DNA markers tightly linked to a disease-resistance locus for marker-assisted selection in lupin (Lupinus angustifolius)

description: Enrichment of SNP markers and InDel markers for the genetic linkage map through sequence alignment on anchored scaffolds between two parental cultivars Tanjil and Unicrop of the mapping population in Lupinus angustifolius. (XLSX 260 kb)
DOI: 10.6084/m9.figshare.c.3609344_d6
title: Additional file 8: of Construction of a high-density genetic map and mapping of a sex-linked locus for the brown alga Undaria pinnatifida (Phaeophyceae) based on large scale marker development by specific length amplified fragment (SLAF) sequencing

description: The indices sequences and the codes for each sample of the mapping population. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.c.3609344_d3
title: Additional file 5: of Construction of a high-density genetic map and mapping of a sex-linked locus for the brown alga Undaria pinnatifida (Phaeophyceae) based on large scale marker development by specific length amplified fragment (SLAF) sequencing

description: The SLAF markers encompassed in the major sex associated locus as revealed by QTL analysis. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.c.3609344_d4
title: Additional file 2: of Construction of a high-density genetic map and mapping of a sex-linked locus for the brown alga Undaria pinnatifida (Phaeophyceae) based on large scale marker development by specific length amplified fragment (SLAF) sequencing

description: High-density genetic linkage map of Undaria pinnatifida constructed in this study. (XLSX 1104Â kb)
DOI: 10.6084/m9.figshare.c.3609344_d2
title: Additional file 7: of Construction of a high-density genetic map and mapping of a sex-linked locus for the brown alga Undaria pinnatifida (Phaeophyceae) based on large scale marker development by specific length amplified fragment (SLAF) sequencing

description: The sequence and annotation of unigenes showing significant similarities to sex-linked SLAF markers of Undaria pinnatifida . (XLSX 9Â kb)
DOI: 10.15468/dl.h6uqmg
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Czechia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Heracleum mantegazzianum Sommier & Levier"
 ]
}

 The dataset includes 208 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032233-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3609179_d4
title: Additional file 2: Figure S1. of Genome-wide characterization of soybean P
                     
                1B
              
                     -ATPases gene family provides functional implications in cadmium responses

description: Complete multiple sequence alignment of the HMA domains of the 20 proteins by DNAMAN. The sequence alignment was conducted by DNAMAN with the default settings. The similarity of sequences was showed by different background colors: dark blue &gt; pink &gt; light green. (EMF 2587 kb)
DOI: 10.6084/m9.figshare.c.3609200_d2
title: Additional file 2: of Efficient test for nonlinear dependence of two continuous variables

description: The significant (associated with kidney cancer) genes only detected by other methods (not including CANOVA). (XLSX 56 kb)
DOI: 10.6084/m9.figshare.c.3609200_d1
title: Additional file 1: of Efficient test for nonlinear dependence of two continuous variables

description: The power comparison of simulation study across Gaussian noise levels (mean = 0, variance = 1/9, 1/4, 4 and 9). (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3609179_d1
title: Additional file 1 of Genome-wide characterization of soybean P
                     
                1B
              
                     -ATPases gene family provides functional implications in cadmium responses

description: Table S1. Summary of the expression values of 20 GmHMAs from the 28 developing soybean tissues by RNA-seq. Table S2. General information on the 20 GmHMA genes and their corresponding deduced GmHMA proteins in soybean. Table S3. General information on AtHMA genes and their corresponding deduced proteins. Table S4. General information on OsHMA genes and their corresponding deduced proteins. Table S5. Duplication types in the 20 GmHMAs. Table S6. Distribution of, and SNPs in, the 20 GmHMAs between wild and cultivated soybean lines. Table S7. Expression information for soybean HMA genes from SoySeq data. Table S8. Expression information for Arabidopsis HMA genes from AtGenExpress data. Table S9. Expression information for rice HMA genes from PLExdb data. Table S10. Expression information for soybean HMA genes by qRT-PCR. Table S11. Protein sequences of the 20 GmHMAs. Table S12. Primers used for qRT-PCR. (XLSX 63Â kb)
DOI: 10.6084/m9.figshare.c.3609134_d5
title: Additional file 5: of Construction of a high-density, high-quality genetic map of cultivated lotus (Nelumbo nucifera) using next-generation sequencing

description: The mapped SNP markersâ   name, position, type and their flanking sequences and the bin marker information. (XLSX 829 kb)
DOI: 10.6084/m9.figshare.c.3609158_d1
title: Additional file 2: Table S1. of A novel mutant allele of SSI2 confers a better balance between disease resistance and plant growth inhibition on Arabidopsis thaliana

description: EXCEL file with RNA-seq data. Table S2. GO analysis of the 484 up-regulated genes. Table S3. Transcriptional profiling data for several SA and IAA pathway genes. Table S4. Primers used in map-based cloning. Table S5. Primers used in the vector construction and mutant analysis. (XLSX 7942 kb)
DOI: 10.6084/m9.figshare.c.3609134_d3
title: Additional file 2: of Construction of a high-density, high-quality genetic map of cultivated lotus (Nelumbo nucifera) using next-generation sequencing

description: The basicÂ sequencing data information of the parents and F2 progenies. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.c.3609134_d2
title: Additional file 3: of Construction of a high-density, high-quality genetic map of cultivated lotus (Nelumbo nucifera) using next-generation sequencing

description: Grouped SNPsâ   name, position on the scaffold and segregation information in the parents and the F2 individuals. (XLS 13352 kb)
DOI: 10.6084/m9.figshare.c.3609098_d1
title: Additional file 2: of RevEcoR: an R package for the reverse ecology analysis of microbiomes

description: Additional information on 116 gut prevalent species, including species names, species interactions and co-occurrence scores. (XLSX 300Â kb)
DOI: 10.6084/m9.figshare.c.3609011_d8
title: Additional file 5: of The human disease network in terms of dysfunctional regulatory mechanisms

description: WD scores for sub-categories of â  disease of anatomical entityâ  . (XLS 21Â kb)
DOI: 10.6084/m9.figshare.c.3609011_d7
title: Additional file 9: of The human disease network in terms of dysfunctional regulatory mechanisms

description: Results of checking genesâ   correlation of pseudo pathways. (ZIP 9816Â kb)
DOI: 10.6084/m9.figshare.c.3609011_d6
title: Additional file 4: of The human disease network in terms of dysfunctional regulatory mechanisms

description: Contingency table to validate the assumption that DE-based disease relationships significantly share disease-related genes or drugs. (XLS 21Â kb)
DOI: 10.15468/dl.3pu28h
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Muraenesox bagio (Hamilton, 1822)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 12 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032235-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3608912_d1
title: Additional file 2: of The prognostic value of lactate dehydrogenase levels in colorectal cancer: a meta-analysis

description: Assessment of risk of bias. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3608810_d8
title: Additional file 7: of Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)

description: KEGG Enrichment analysis of differentially expressed transcripts. (XLSX 12Â kb)
DOI: 10.5281/zenodo.14421730
title: THE IMPORTANCE OF RELATIONS WITH FOREIGN COUNTRIES IN THE DEVELOPMENT OF THE FERGHANA VALLEY'S AGRICULTURAL SECTOR.
DOI: 10.5281/zenodo.14421731
title: THE IMPORTANCE OF RELATIONS WITH FOREIGN COUNTRIES IN THE DEVELOPMENT OF THE FERGHANA VALLEY'S AGRICULTURAL SECTOR.
DOI: 10.6084/m9.figshare.c.3608810_d7
title: Additional file 2: of Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)

description: Transcripts annotated by GO, KEGG, and eggNOG. (XLSX 4808Â kb)
DOI: 10.6084/m9.figshare.c.3608810_d6
title: Additional file 4: of Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)

description: 24 floral genes of quantitative real time PCR for validation of RNA-Seq data. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.c.3608810_d5
title: Additional file 6: of Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)

description: GO Enrichment analysis of differentially expressed transcripts. (XLSX 26Â kb)
DOI: 10.6084/m9.figshare.c.3608810_d4
title: Additional file 5: of Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)

description: Differentially expressed transcripts between CH and CL flowers. In total, 396 genes were identified as differentially expressed (|log2FC| &gt; 2, p-value
DOI: 10.6084/m9.figshare.c.3608810_d2
title: Additional file 8: of Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)

description: KEGG pathways classification for differentially expressed transcripts between CH (A) and CL (B) flowers. Red dot represented transcripts up-regulated in CH flowers, green dot represented transcript up-regulated in CL flowers. (XLSX 36Â kb)