cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25505/fiz.icsd.cc2pzfjn
title: CSD 2501902: Experimental Crystal Structure Determination

description: Related Article: T. Kitamura, T. Niimi, H. Okudera|2026|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|82|98|doi:10.1107/S2052520625009928
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2pzfkp
title: CSD 2501903: Experimental Crystal Structure Determination

description: Related Article: T. Kitamura, T. Niimi, H. Okudera|2026|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|82|98|doi:10.1107/S2052520625009928
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2pzflq
title: CSD 2501904: Experimental Crystal Structure Determination

description: Related Article: T. Kitamura, T. Niimi, H. Okudera|2026|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|82|98|doi:10.1107/S2052520625009928
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2pzfmr
title: CSD 2501905: Experimental Crystal Structure Determination

description: Related Article: T. Kitamura, T. Niimi, H. Okudera|2026|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|82|98|doi:10.1107/S2052520625009928
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2pzfns
title: CSD 2501906: Experimental Crystal Structure Determination

description: Related Article: T. Kitamura, T. Niimi, H. Okudera|2026|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|82|98|doi:10.1107/S2052520625009928
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28vm0s
title: CCDC 2110945: Experimental Crystal Structure Determination

description: Related Article: N. Di Benedetto, M.A. Macías, N. Méndez, M. Martínez Cabrera, L. Suescun|2026|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|82|54|doi:10.1107/S2052520625010376
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28vm1t
title: CCDC 2110946: Experimental Crystal Structure Determination

description: Related Article: N. Di Benedetto, M.A. Macías, N. Méndez, M. Martínez Cabrera, L. Suescun|2026|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|82|54|doi:10.1107/S2052520625010376
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2qc0z3
title: CSD 2513045: Experimental Crystal Structure Determination

description: Related Article: K. Hirano, H. Okudera|2026|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|82|68|doi:10.1107/S2052520625010844
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28vm2v
title: CCDC 2110947: Experimental Crystal Structure Determination

description: Related Article: N. Di Benedetto, M.A. Macías, N. Méndez, M. Martínez Cabrera, L. Suescun|2026|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|82|54|doi:10.1107/S2052520625010376
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.29948068
title: Quantifying local scour at bridge piers in coarse-bed streams: insights from on-site measurements and nonlinear quantile regression

description: This study investigates local scour at bridge piers in coarse-bed streams, which are characterized by an armor layer of large sediment particles. Unlike traditional approaches that rely on laboratory experiments conducted in sand-filled flumes, this research leverages a wide-ranging collection of on-site measurements from coarse-bed channels to develop more representative scour prediction models. The study employs nonlinear quantile regression (NQR) to estimate scour depths at quantile levels of 0.5 (median), 0.95, and 0.99. Models developed for higher quantiles provide statistically robust safety margins essential for bridge design, significantly improving predictive accuracy over widely used empirical equations derived from sand-bed conditions. This contribution enhances the understanding of local pier scour in coarse-bed streams and advances engineering practices for safer and more resilient bridge infrastructure in these challenging environments.
DOI: 10.6084/m9.figshare.29948068.v1
title: Quantifying local scour at bridge piers in coarse-bed streams: insights from on-site measurements and nonlinear quantile regression

description: This study investigates local scour at bridge piers in coarse-bed streams, which are characterized by an armor layer of large sediment particles. Unlike traditional approaches that rely on laboratory experiments conducted in sand-filled flumes, this research leverages a wide-ranging collection of on-site measurements from coarse-bed channels to develop more representative scour prediction models. The study employs nonlinear quantile regression (NQR) to estimate scour depths at quantile levels of 0.5 (median), 0.95, and 0.99. Models developed for higher quantiles provide statistically robust safety margins essential for bridge design, significantly improving predictive accuracy over widely used empirical equations derived from sand-bed conditions. This contribution enhances the understanding of local pier scour in coarse-bed streams and advances engineering practices for safer and more resilient bridge infrastructure in these challenging environments.
DOI: 10.5061/dryad.6d159
title: Data from: Mandated reporters’ experiences with reporting child maltreatment: a meta-synthesis of qualitative studies

description: Objective: To systematically search for research about the effectiveness
 of mandatory reporting of child maltreatment and to synthesize qualitative
 research that explores mandated reporters’ (MRs) experiences with
 reporting. Design: As no studies assessing the effectiveness of mandatory
 reporting were retrieved from our systematic search, we conducted a
 meta-synthesis of retrieved qualitative research. Searches in Medline
 (OVID), Embase, PsycINFO, CINAHL, Sociological Abstracts, ERIC, Criminal
 Justice Abstracts, and Cochrane Library yielded over 6000 citations, which
 were deduplicated and then screened by two independent reviewers.
 English-language, primary qualitative studies that investigated MRs’
 experiences with reporting of child maltreatment were included. Critical
 appraisal involved a modified checklist from the Critical Appraisal Skills
 Programme (CASP) and qualitative meta-synthesis was used to combine
 results from the primary studies. Setting: All healthcare and
 social-service settings implicated by mandatory reporting laws were
 included. Included studies crossed nine high-income countries (United
 States, Australia, Sweden, Taiwan, Canada, Norway, Finland, Israel and
 Cyprus) and three middle-income countries (South Africa, Brazil, and El
 Salvador). Participants: The studies represent the views of 1088 MRs.
 Outcomes: Factors that influence MRs’ decision to report and MRs’ views
 towards and experiences with mandatory reporting of child maltreatment.
 Results: Forty-four articles reporting 42 studies were included. Findings
 indicate that MRs struggle to identify and respond to less overt forms of
 child maltreatment. While some articles (14%) described positive
 experiences MRs had with the reporting process, negative experiences were
 reported in 73% of articles and included accounts of harm to therapeutic
 relationships and child death following removal from their family of
 origin. Conclusions: The findings of this meta-synthesis suggest that
 there are many potentially harmful experiences associated with mandatory
 reporting and that research on the effectiveness of this process is
 urgently needed.
description: Mandatory Reporting
 Meta-Synthesis - Extracted Data CodedAll data extracted and
 coded data for this meta-synthesis is found in this excel
 file.
DOI: 10.5061/dryad.c8q11
title: Data from: Transcontinental dispersal, ecological opportunity and origins of an adaptive radiation in the Neotropical catfish genus Hypostomus (Siluriformes: Loricariidae)

description: Ecological opportunity is often proposed as a driver of accelerated
 diversification, but evidence has been largely derived from either
 contemporary island radiations or the fossil record. Here, we investigate
 the potential influence of ecological opportunity on a transcontinental
 radiation of South American freshwater fishes. We generate a
 species-dense, time-calibrated molecular phylogeny for the suckermouth
 armored catfish subfamily Hypostominae, with a focus on the species-rich
 and geographically widespread genus Hypostomus. We use the resulting
 chronogram to estimate ancestral geographic ranges, infer historical rates
 of cladogenesis and diversification in habitat and body size and shape,
 and test the hypothesis that invasions of previously unoccupied river
 drainages accelerated evolution and contributed to adaptive radiation.
 Both the subfamily Hypostominae and the included genus Hypostomus
 originated in the Amazon/Orinoco ecoregion. Hypostomus subsequently
 dispersed throughout tropical South America east of the Andes Mountains.
 Consequent to invasion of the peripheral, low-diversity Paraná River basin
 in southeastern Brazil approximately 12.5 Mya, Paraná lineages of
 Hypostomus experienced increased rates of cladogenesis and ecological and
 morphological diversification. Contemporary lineages of Paraná Hypostomus
 are less species rich but more phenotypically diverse than their congeners
 elsewhere. Accelerated speciation and morphological diversification rates
 within Paraná basin Hypostomus are consistent with adaptive radiation. The
 geographical remoteness of the Paraná River basin, its recent history of
 marine incursion, and its continuing exclusion of many species that are
 widespread in other tropical South American rivers suggest that ecological
 opportunity played an important role in facilitating the observed
 accelerations in diversification.
description: Supplementary
 Table_Morphological data matrixThis table includes 33
 morphometric characters on the bodies of two adult specimens from each of
 125 species and 24 genera of Hypostominae, using 31 homologous landmarks
 originally proposed by Armbruster (2003): 14 of which were on the head, 5
 on the mouth, and the remainder on the trunk or fins.Hypostominae Ultrametric
 TreeHypostominae ultrametric
 tree used in all macroevolutionary analysis.
DOI: 10.5061/dryad.t3j5n
title: Data from: Copulation with immature females increases male fitness in cannibalistic widow spiders

description: Copulatory cannibalism of male ‘widow’ spiders (genus Latrodectus) is a
 model example of the extreme effects of sexual selection, particularly in
 L. hasselti and L. geometricus where males typically facilitate
 cannibalism by females and mate only once. We show that these males can
 increase their reproductive success by copulating with final-instar,
 immature females after piercing the female's exoskeleton to access
 her newly developed sperm storage organs. Females retain sperm through
 their final moult and have similar fecundity to adult-mated females. This
 is an adaptive male tactic because immature mating increases insemination
 success relative to adult mating (which predicts higher paternity) and
 moreover, rarely ends in cannibalism, so males can mate again. Although
 successful only during a brief period before the female's final
 moult, males may employ this tactic when they associate with final-instar
 females in nature. Consistent with this, one-third of L. hasselti females
 collected as immatures in nature were already mated. Immature mating
 alters sexual selection on these otherwise monogynous males, and may
 explain male traits allowing facultative polygyny in Latrodectus. Since
 male cohabitation with immature females is common among invertebrates,
 immature mating may be a widespread, previously unrecognized mating
 tactic, particularly when unmated females are of high reproductive value.
description: Biaggio et al BioLetters
 2016 Table 1 dataThese data are the basis
 of Generalized linear models reported in Table 1 and the copulation and
 vibratory courtship frequency data (Fisher’s exact tests) in that table
 and the text of Biaggio et al 2016, Biology Letters. Column headings are
 defined in the READ ME file.Biaggio et al BioLetters
 2016 Figure 2 dataThese data are the basis
 of Figure 2 in Biaggio et al BIoLetters 2016. This summarizes behavioural
 mating outcomes for pairs in which mating occurred; these data were tested
 using Fisher’s exact tests.
DOI: 10.5061/dryad.9hb89
title: Data from: Genetic differentiation and admixture between sibling allopolyploids in the Dactylorhiza majalis complex

description: Allopolyploidization often happens recurrently, but the evolutionary
 significance of its iterative nature is not yet fully understood. Of
 particular interest are the gene flow dynamics and the mechanisms that
 allow young sibling polyploids to remain distinct while sharing the same
 ploidy, heritage and overlapping distribution areas. By using eight highly
 variable nuclear microsatellites, newly reported here, we investigate the
 patterns of divergence and gene flow between 386 polyploid and 42 diploid
 individuals, representing the sibling allopolyploids Dactylorhiza majalis
 s.s. and D. traunsteineri s.l. and their parents at localities across
 Europe. We make use in our inference of the distinct distribution ranges
 of the polyploids, including areas in which they are sympatric (that is,
 the Alps) or allopatric (for example, Pyrenees with D. majalis only and
 Britain with D. traunsteineri only). Our results show a phylogeographic
 signal, but no clear genetic differentiation between the allopolyploids,
 despite the visible phenotypic divergence between them. The results
 indicate that gene flow between sibling Dactylorhiza allopolyploids is
 frequent in sympatry, with potential implications for the genetic patterns
 across their entire distribution range. Limited interploidal introgression
 is also evidenced, in particular between D. incarnata and D.
 traunsteineri. Altogether the allopolyploid genomes appear to be porous
 for introgression from related diploids and polyploids. We conclude that
 the observed phenotypic divergence between D. majalis and D. traunsteineri
 is maintained by strong divergent selection on specific genomic areas with
 strong penetrance, but which are short enough to remain undetected by
 genotyping dispersed neutral markers.
description: DataSource data used. The
 separate worksheets refer to information related to: (1) microsatellite
 data, (2) pairwise geographical and genetic distances of D. majalis, (3)
 pairwise geographical and genetic distances of D. traunsteineri, (4)
 population pairwise GST data and (5) additional parameters for
 analysis.R_script_BruvoPCoAR script used to draw a PCoA based on the Bruvo distance measure.R_script_Mantel_RMAR script for running a Mantel test and a Reduced Major Axis (RMA) regression.R_script_pwGSTR script to calculate pairwise Gst analyses.
DOI: 10.5061/dryad.ph920
title: Data from: Deep sequencing of mixed total DNA without barcodes allows efficient assembly of highly plastic ascidian mitochondrial genomes

description: Ascidians or sea squirts form a diverse group within chordates, which
 includes a few thousand members of marine sessile filter-feeding animals.
 Their mitochondrial genomes are characterized by particularly high
 evolutionary rates and rampant gene rearrangements. This extreme
 variability complicates standard PCR-based techniques for molecular
 characterization studies, and consequently only a few complete ascidian
 mitochondrial genome sequences are available. Using the standard PCR and
 Sanger sequencing approach, we produced the mitochondrial genome of
 Ascidiella aspersa only after a great effort. In contrast, we produced
 five additional mitogenomes (Botrylloides aff. leachii, Halocynthia
 spinosa, Polycarpa mytiligera, Pyura gangelion, and Rhodosoma turcicum)
 with a novel strategy, consisting in sequencing the pooled total DNA
 samples of these five species using one Illumina HiSeq 2000 flow cell
 lane. Each mitogenome was efficiently assembled in a single contig using
 de novo transcriptome assembly, as de novo genome assembly generally
 performed poorly for this task. Each of the new six mitogenomes presents a
 different and novel gene order, showing that no syntenic block has been
 conserved at the ordinal level (in Stolidobranchia and in Phlebobranchia).
 Phylogenetic analyses support the paraphyly of both Ascidiacea and
 Phlebobranchia, with Thaliacea nested inside Phlebobranchia, although the
 deepest nodes of the Phlebobranchia-Thaliacea clade are not well resolved.
 The strategy described here thus provides a cost-effective approach to
 obtain complete mitogenomes characterized by a highly plastic gene order
 and a fast nucleotide/amino-acid substitution rate.
description: Contatenation of the 13
 mitochondrial proteins for 38 deuterostomes in nexus
 formatAmbiguously aligned
 sites have been excluded using TrimAl.Rubinstein-GBE2013.nexBayesian consensus tree obtained from the contatenation of 13 mitochondrial proteins for 38 deuterostomes under the CAT-GTR+G mixture modelPhylogeny of Deuterosomes inferred from the concatenation of the 13 mitochondrial proteins. Bayesian consensus tree of 4 independent MCMC runs obtained using the CAT+GTR+G mixture model (38 taxa and 3,038 amino-acid sites). Values at nodes correspond to Bayesian posterior probabilities (PP).Rubinstein-GBE2013.tre
DOI: 10.5061/dryad.6r8p3
title: Data from: Natural habitat does not mediate vertebrate seed predation as an ecosystem dis-service to agriculture

description: 1. Spillover of beneficial organisms from natural habitats to croplands
 can improve agro-ecosystem services, but wildlife can also negatively
 influence agricultural production. When managing agricultural landscapes
 to conserve biodiversity, we need to understand if the availability of
 natural habitats increases ecosystem dis-services such as vertebrate seed
 predation to avoid risking higher costs than benefits. 2. We studied
 whether vertebrates and their impact in crop seed predation are related to
 the percentage of natural (Chaparral) and semi-natural habitat (planted
 forest with native and exotic trees) in an agricultural landscape of
 Israel. We selected 20 almond and 20 sunflower study sites within a
 landscape with varying percentages of natural (0–61%) and semi-natural
 (0–70%) habitats within a 1000-m radius of their surroundings. We observed
 birds, trapped rodents (in almond), counted seeds and noted feeding marks
 to obtain seed predation rates, at each site. Within the almond crops, we
 physically excluded birds, rodents and both to determine their relative
 and combined influence on seed predation. 3. Neither vertebrate abundance
 nor species richness was influenced by the percentage of natural habitat.
 However, bird species richness increased with increasing percentage of
 semi-natural habitat. 4. Seed predation across both crops was not
 influenced by natural or semi-natural habitat but increased significantly
 with increasing abundance and species richness of birds. This was also
 reflected by the exclusions of birds, vertebrates and both to the almond
 crop, leading to lowest seed predation when both groups were excluded. 5.
 Synthesis and applications. Natural or semi-natural habitat did not
 influence the agro-ecosystem dis-service of seed predation by birds and
 rodents. Policymakers should consider promoting agri-environment schemes
 that include the conservation of natural habitats and the management of
 semi-natural habitats adjacent to cropland to enhance agro-ecosystem
 services meditated by beneficial organisms like natural pest enemies and
 pollinators without fearing increased vertebrate seed predation. In order
 to provide more detailed management recommendations tackling the reduction
 of vertebrate dis-services their feeding behaviour, metabolic needs,
 behaviour patterns and local abundances should be taken into account.
description: Schaeckermann_et_al_RScript_JAPPLStatistics script to be used in R Software for the analyses of the data used for the publication "Natural habitat does not mediate vertebrate seed predation as an ecosystem dis-service to agriculture"Schaeckermann_RScript_JAPPL.docSchaeckermann_et_al_data_JAPPLData used for the publication "Natural habitat does not mediate vertebrate seed predation as an ecosystem dis-service to agriculture". Data for the different analyses appears on the first three tables, the fourth table offers explanations.Schaeckermann_data_JAPPL.xls