cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2bmr3v
title: CCDC 2163927: Experimental Crystal Structure Determination

description: Related Article: Hyojong Yoo, Donald H. Berry|2022|Inorg.Chem.|61|8639|doi:10.1021/acs.inorgchem.2c01317
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.4333565
title: Stellar evolution tracks comparing turbulent pressure driven mass loss and the de Jager mass-loss rates

description: The uploaded files provide a series of stellar evolution tracks with initial masses from 16 to 20 \(M_\odot\). The two sets of tracks compare the evolution of stars evolved on the red supergiant branch with the Kee et al. turbulent pressure driven mass-loss rates to stars that instead use the de Jager mass-loss rates.
DOI: 10.5281/zenodo.4333564
title: Stellar evolution tracks comparing turbulent pressure driven mass loss and the de Jager mass-loss rates

description: The uploaded files provide a series of stellar evolution tracks with initial masses from 16 to 20 \(M_\odot\). The two sets of tracks compare the evolution of stars evolved on the red supergiant branch with the Kee et al. turbulent pressure driven mass-loss rates to stars that instead use the de Jager mass-loss rates.
DOI: 10.6084/m9.figshare.20076635
title: Additional file 2 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 2: Table S1. 188 novel orthogroups among 267 fungal species.
DOI: 10.6084/m9.figshare.20076635.v1
title: Additional file 2 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 2: Table S1. 188 novel orthogroups among 267 fungal species.
DOI: 10.6084/m9.figshare.20076638
title: Additional file 3 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 3: Table S2. Annotation of 188 novel orthogroups.
DOI: 10.6084/m9.figshare.20076641
title: Additional file 4 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 4: Table S3. GO enrichment analysis of novel orthogroups based on Saccharomyces cerevisiae homologs.
DOI: 10.6084/m9.figshare.20076641.v1
title: Additional file 4 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 4: Table S3. GO enrichment analysis of novel orthogroups based on Saccharomyces cerevisiae homologs.
DOI: 10.6084/m9.figshare.20076644.v1
title: Additional file 5 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 5: Table S4. Details of mitochondria-localized novel proteins.
DOI: 10.6084/m9.figshare.20076638.v1
title: Additional file 3 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 3: Table S2. Annotation of 188 novel orthogroups.
DOI: 10.6084/m9.figshare.20076644
title: Additional file 5 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 5: Table S4. Details of mitochondria-localized novel proteins.
DOI: 10.6084/m9.figshare.20076647.v1
title: Additional file 6 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 6: Table S5. Distribution of dihydroorotate dehydrogenases among 267 fungal species.
DOI: 10.6084/m9.figshare.20076650
title: Additional file 7 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 7: Table S6. Genomes used in this study, species code, BUSCO scores and phylum information.
DOI: 10.6084/m9.figshare.20076647
title: Additional file 6 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 6: Table S5. Distribution of dihydroorotate dehydrogenases among 267 fungal species.
DOI: 10.6084/m9.figshare.20076650.v1
title: Additional file 7 of Reconstruction of gene innovation associated with major evolutionary transitions in the kingdom Fungi

description: Additional file 7: Table S6. Genomes used in this study, species code, BUSCO scores and phylum information.
DOI: 10.6084/m9.figshare.20076744.v1
title: Additional file 1 of The E6 and E7 proteins of beta3 human papillomavirus 49 can deregulate both cellular and extracellular vesicles-carried microRNAs

description: Additional file 1: Table S1. Data from miRNAs profiling on K49 compared to HFK cells. MiRNAs analysis conduced using the TaqMan® Array Human MicroRNA Card assay. By escluding control miRNAs (i.e., RNU6, RNU44, RNU48) and miRNAs refer to other species (i.e., ath, mmus) 360 miRNAs have been analyzed. The seleceted miRNAs (bolded) have been chosen based on their expression level (Cq &lt; 31 at least in one of the samples) and fold of induction different from 1. Table S2. Data from miRNAs profiling on EV_K16 compared toEV_K16sil. MiRNAs analysis conduced using the TaqMan® Array Human MicroRNA Card assay. By escluding control miRNAs (i.e., RNU6, RNU44, RNU48) and miRNAs refer to other species (i.e., ath, mmus) 360 miRNAs have been analyzed. The seleceted miRNAs (bolded) have been chosen based on their expression level (Cq &lt; 31 at least in one of the samples) and fold of induction different from 1.
DOI: 10.6084/m9.figshare.20076744
title: Additional file 1 of The E6 and E7 proteins of beta3 human papillomavirus 49 can deregulate both cellular and extracellular vesicles-carried microRNAs

description: Additional file 1: Table S1. Data from miRNAs profiling on K49 compared to HFK cells. MiRNAs analysis conduced using the TaqMan® Array Human MicroRNA Card assay. By escluding control miRNAs (i.e., RNU6, RNU44, RNU48) and miRNAs refer to other species (i.e., ath, mmus) 360 miRNAs have been analyzed. The seleceted miRNAs (bolded) have been chosen based on their expression level (Cq &lt; 31 at least in one of the samples) and fold of induction different from 1. Table S2. Data from miRNAs profiling on EV_K16 compared toEV_K16sil. MiRNAs analysis conduced using the TaqMan® Array Human MicroRNA Card assay. By escluding control miRNAs (i.e., RNU6, RNU44, RNU48) and miRNAs refer to other species (i.e., ath, mmus) 360 miRNAs have been analyzed. The seleceted miRNAs (bolded) have been chosen based on their expression level (Cq &lt; 31 at least in one of the samples) and fold of induction different from 1.
DOI: 10.6084/m9.figshare.20076722
title: Additional file 10 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 10: Table S10. All SNPs. All SNPs used in any model building. The first three columns contain SNP information: Group, rsID, and hg19 chromosome and position. Remaining columns indicate trait model. For each SNP-model combination, table notes if SNP was Not Used, used as training negative, used as training positive, used as holdout negative, or used as holdout positive.
DOI: 10.6084/m9.figshare.20076722.v1
title: Additional file 10 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 10: Table S10. All SNPs. All SNPs used in any model building. The first three columns contain SNP information: Group, rsID, and hg19 chromosome and position. Remaining columns indicate trait model. For each SNP-model combination, table notes if SNP was Not Used, used as training negative, used as training positive, used as holdout negative, or used as holdout positive.
DOI: 10.6084/m9.figshare.20076725
title: Additional file 11 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 11: Table S11. Autoimmune testing.
DOI: 10.6084/m9.figshare.20076725.v1
title: Additional file 11 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 11: Table S11. Autoimmune testing.
DOI: 10.6084/m9.figshare.20076728.v1
title: Additional file 12 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 12: Table S12. Autoimmune training.
DOI: 10.6084/m9.figshare.20076731.v1
title: Additional file 13 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 13: Table S13. BC testing.
DOI: 10.6084/m9.figshare.20076728
title: Additional file 12 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 12: Table S12. Autoimmune training.
DOI: 10.6084/m9.figshare.20076731
title: Additional file 13 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 13: Table S13. BC testing.
DOI: 10.6084/m9.figshare.20076740
title: Additional file 15 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 15: Table S15. Birthweight testing.
DOI: 10.6084/m9.figshare.20076734
title: Additional file 14 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 14: Table S14. BC training.
DOI: 10.6084/m9.figshare.20076734.v1
title: Additional file 14 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 14: Table S14. BC training.
DOI: 10.6084/m9.figshare.20076740.v1
title: Additional file 15 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 15: Table S15. Birthweight testing.
DOI: 10.6084/m9.figshare.20076743
title: Additional file 16 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 16: Table S16. Birthweight training.
DOI: 10.6084/m9.figshare.20076743.v1
title: Additional file 16 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 16: Table S16. Birthweight training.
DOI: 10.6084/m9.figshare.20076746.v1
title: Additional file 17 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 17: Table S17. BMD testing.
DOI: 10.6084/m9.figshare.20076746
title: Additional file 17 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 17: Table S17. BMD testing.
DOI: 10.6084/m9.figshare.20076749
title: Additional file 18 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 18: Table S18. BMD training.
DOI: 10.6084/m9.figshare.20076749.v1
title: Additional file 18 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 18: Table S18. BMD training.
DOI: 10.6084/m9.figshare.20076752
title: Additional file 19 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 19: Table S19. BMI testing.
DOI: 10.6084/m9.figshare.20076752.v1
title: Additional file 19 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 19: Table S19. BMI testing.
DOI: 10.6084/m9.figshare.20076755
title: Additional file 1 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 1: Table S1. Trait Groups. Phenotypes and how we grouped them into traits. Columns are Trait, Trait abbreviation, phenotype, GWAS citation, Number of Lead SNPs included from Citation, and Summary Statistic availability.
DOI: 10.6084/m9.figshare.20076755.v1
title: Additional file 1 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 1: Table S1. Trait Groups. Phenotypes and how we grouped them into traits. Columns are Trait, Trait abbreviation, phenotype, GWAS citation, Number of Lead SNPs included from Citation, and Summary Statistic availability.
DOI: 10.6084/m9.figshare.20076758
title: Additional file 20 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 20: Table S20. BMI training.
DOI: 10.6084/m9.figshare.20076758.v1
title: Additional file 20 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 20: Table S20. BMI training.
DOI: 10.6084/m9.figshare.20076764
title: Additional file 21 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 21: Table S21. BP testing.
DOI: 10.6084/m9.figshare.20076764.v1
title: Additional file 21 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 21: Table S21. BP testing.
DOI: 10.6084/m9.figshare.20076767
title: Additional file 22 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 22: Table S22. BP training.
DOI: 10.6084/m9.figshare.20076767.v1
title: Additional file 22 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 22: Table S22. BP training.
DOI: 10.6084/m9.figshare.20076770
title: Additional file 23 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 23: Table S23. CAD testing.
DOI: 10.6084/m9.figshare.20076770.v1
title: Additional file 23 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 23: Table S23. CAD testing.
DOI: 10.6084/m9.figshare.20076773
title: Additional file 24 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 24: Table S24. CAD training.
DOI: 10.6084/m9.figshare.20076773.v1
title: Additional file 24 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 24: Table S24. CAD training.
DOI: 10.6084/m9.figshare.20076776
title: Additional file 25 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 25: Table S25. ECG testing.
DOI: 10.6084/m9.figshare.20076776.v1
title: Additional file 25 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 25: Table S25. ECG testing.
DOI: 10.6084/m9.figshare.20076779.v1
title: Additional file 26 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 26: Table S26. ECG training.
DOI: 10.6084/m9.figshare.20076779
title: Additional file 26 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 26: Table S26. ECG training.
DOI: 10.6084/m9.figshare.20076782
title: Additional file 27 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 27: Table S27. Height testing.
DOI: 10.6084/m9.figshare.20076782.v1
title: Additional file 27 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 27: Table S27. Height testing.
DOI: 10.6084/m9.figshare.20076785
title: Additional file 28 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 28: Table S28. Height training.
DOI: 10.6084/m9.figshare.20076785.v1
title: Additional file 28 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 28: Table S28. Height training.
DOI: 10.6084/m9.figshare.20076788
title: Additional file 29 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 29: Table S29. Lipids testing.
DOI: 10.6084/m9.figshare.20076791
title: Additional file 2 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 2: Table S2. List of Features. All 2305 features used to build models. Columns are Feature Name, Source, Type, Sample, and Tissue.
DOI: 10.6084/m9.figshare.20076791.v1
title: Additional file 2 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 2: Table S2. List of Features. All 2305 features used to build models. Columns are Feature Name, Source, Type, Sample, and Tissue.
DOI: 10.6084/m9.figshare.20076794
title: Additional file 30 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 30: Table S30. Lipids training.
DOI: 10.6084/m9.figshare.20076788.v1
title: Additional file 29 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 29: Table S29. Lipids testing.
DOI: 10.6084/m9.figshare.20076794.v1
title: Additional file 30 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 30: Table S30. Lipids training.
DOI: 10.6084/m9.figshare.20076797
title: Additional file 31 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 31: Table S31. Menarche testing.
DOI: 10.6084/m9.figshare.20076800
title: Additional file 32 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 32: Table S32. Menarche training.
DOI: 10.6084/m9.figshare.20076800.v1
title: Additional file 32 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 32: Table S32. Menarche training.
DOI: 10.6084/m9.figshare.20076803.v1
title: Additional file 33 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 33: Table S33. Platelets testing.
DOI: 10.6084/m9.figshare.20076797.v1
title: Additional file 31 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 31: Table S31. Menarche testing.
DOI: 10.6084/m9.figshare.20076809
title: Additional file 34 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 34: Table S34. Platelets training.
DOI: 10.6084/m9.figshare.20076809.v1
title: Additional file 34 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 34: Table S34. Platelets training.
DOI: 10.6084/m9.figshare.20076803
title: Additional file 33 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 33: Table S33. Platelets testing.
DOI: 10.6084/m9.figshare.20076812
title: Additional file 35 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 35: Table S35. RBC testing.
DOI: 10.6084/m9.figshare.20076815
title: Additional file 36 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 36: Table S36. RBC training.
DOI: 10.6084/m9.figshare.20076812.v1
title: Additional file 35 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 35: Table S35. RBC testing.
DOI: 10.6084/m9.figshare.20076815.v1
title: Additional file 36 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 36: Table S36. RBC training.
DOI: 10.6084/m9.figshare.20076818
title: Additional file 37 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 37: Table S37. S_BD testing.
DOI: 10.6084/m9.figshare.20076821
title: Additional file 38 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 38: Table S38. S_BD training.
DOI: 10.6084/m9.figshare.20076821.v1
title: Additional file 38 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 38: Table S38. S_BD training.
DOI: 10.6084/m9.figshare.20076824
title: Additional file 39 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 39: Table S39. T2D testing.
DOI: 10.6084/m9.figshare.20076818.v1
title: Additional file 37 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 37: Table S37. S_BD testing.
DOI: 10.6084/m9.figshare.20076824.v1
title: Additional file 39 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 39: Table S39. T2D testing.
DOI: 10.6084/m9.figshare.20076827
title: Additional file 3 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 3: Table S3. Full Coefficient_Names. Features returned by TSABL models. Columns are Identifier, Type, Mark, Name, autoimmune, ECG, lipids, platelets, RBC, WBC; the last 6 columns contain the coefficient values for the named model.
DOI: 10.6084/m9.figshare.20076827.v1
title: Additional file 3 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 3: Table S3. Full Coefficient_Names. Features returned by TSABL models. Columns are Identifier, Type, Mark, Name, autoimmune, ECG, lipids, platelets, RBC, WBC; the last 6 columns contain the coefficient values for the named model.
DOI: 10.6084/m9.figshare.20076830
title: Additional file 40 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 40: Table S40. T2D training.
DOI: 10.6084/m9.figshare.20076830.v1
title: Additional file 40 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 40: Table S40. T2D training.
DOI: 10.6084/m9.figshare.20076833
title: Additional file 41 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 41: Table S41. WBC testing.
DOI: 10.6084/m9.figshare.20076833.v1
title: Additional file 41 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 41: Table S41. WBC testing.
DOI: 10.6084/m9.figshare.20076836
title: Additional file 42 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 42: Table S42. WBC training.
DOI: 10.6084/m9.figshare.20076836.v1
title: Additional file 42 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 42: Table S42. WBC training.
DOI: 10.6084/m9.figshare.20076839
title: Additional file 43 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 43: Table S43. WHRadjBMI testing.
DOI: 10.6084/m9.figshare.20076845.v1
title: Additional file 45 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 45: Table S45. LDSC SNPs removed. Lists of SNPs removed between Table S4 and Table S5.
DOI: 10.6084/m9.figshare.20076839.v1
title: Additional file 43 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 43: Table S43. WHRadjBMI testing.
DOI: 10.6084/m9.figshare.20076842
title: Additional file 44 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 44: Table S44. WHRadjBMI training.
DOI: 10.6084/m9.figshare.20076842.v1
title: Additional file 44 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 44: Table S44. WHRadjBMI training.
DOI: 10.6084/m9.figshare.20076845
title: Additional file 45 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 45: Table S45. LDSC SNPs removed. Lists of SNPs removed between Table S4 and Table S5.
DOI: 10.6084/m9.figshare.20076851
title: Additional file 4 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 4: Table S4. LDSC. Results of LDSC partitioned heritability analysis; each tab is named as trait_phenotype where trait indicates the trait group modeled and phenotype the specific GWAS phenotype.
DOI: 10.6084/m9.figshare.20076854.v1
title: Additional file 5 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 5: Table S5. LDSC no lead r2. Results of LDSC partitioned heritability analysis where all SNPs with LD R2 &gt; 0.7 have been removed from the analysis; each tab is named as trait_phenotype where trait indicates the trait group modeled and phenotype the specific GWAS phenotype.
DOI: 10.6084/m9.figshare.20076857
title: Additional file 6 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 6: Table S6. Locus Discovery. High scoring SNPs from discover analysis. First tab is summary of SNP numbers by trait, remaining tabs are individual lists per trait.
DOI: 10.6084/m9.figshare.20076857.v1
title: Additional file 6 of TSABL: Trait Specific Annotation Based Locus predictor

description: Additional file 6: Table S6. Locus Discovery. High scoring SNPs from discover analysis. First tab is summary of SNP numbers by trait, remaining tabs are individual lists per trait.