cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24220366
title: Supplementary Information.zip from A new archosauriform species from the panchet formation of India and the diversification of proterosuchidae after the end-permian mass extinction

description: Proterosuchidae represents the oldest substantial diversification of Archosauromorpha and plays a key role in understanding the biotic recovery after the end-Permian mass extinction. Proterosuchidae was long treated as a wastebasket taxon, but recent revisions have reduced its taxonomic content to five valid species from the latest Permian of Russia and the earliest Triassic (Induan) of South Africa and China. In addition to these occurrences, several isolated proterosuchid bones have been reported from the Induan Panchet Formation of India for over 150 years. Following the re-study of historical specimens and newly collected material from this unit, we erect the new proterosuchid species <i>Samsarasuchus pamelae</i>, which is represented by most of the presacral vertebral column. We also describe cf. proterosuchid and proterosuchid cranial, girdle, and limb bones that are not referred to <i>Samsarasuchus pamelae</i>. Phylogenetic analyses recovered <i>Samsarasuchus pamelae</i> within the new proterosuchid clade Chasmatosuchinae. The taxonomic diversity of Proterosuchidae is substantially expanded here, with at least 11 nominal species and several currently unnamed specimens, and a biogeographical range encompassing present-day South Africa, China, Russia, India, Brazil, Uruguay, and Australia. This indicates a broader taxonomic, phylogenetic and biogeographic diversification of Proterosuchidae than previously thought in the aftermath of the end-Permian mass extinction.
DOI: 10.6084/m9.figshare.24220366.v1
title: Supplementary Information.zip from A new archosauriform species from the panchet formation of India and the diversification of proterosuchidae after the end-permian mass extinction

description: Proterosuchidae represents the oldest substantial diversification of Archosauromorpha and plays a key role in understanding the biotic recovery after the end-Permian mass extinction. Proterosuchidae was long treated as a wastebasket taxon, but recent revisions have reduced its taxonomic content to five valid species from the latest Permian of Russia and the earliest Triassic (Induan) of South Africa and China. In addition to these occurrences, several isolated proterosuchid bones have been reported from the Induan Panchet Formation of India for over 150 years. Following the re-study of historical specimens and newly collected material from this unit, we erect the new proterosuchid species <i>Samsarasuchus pamelae</i>, which is represented by most of the presacral vertebral column. We also describe cf. proterosuchid and proterosuchid cranial, girdle, and limb bones that are not referred to <i>Samsarasuchus pamelae</i>. Phylogenetic analyses recovered <i>Samsarasuchus pamelae</i> within the new proterosuchid clade Chasmatosuchinae. The taxonomic diversity of Proterosuchidae is substantially expanded here, with at least 11 nominal species and several currently unnamed specimens, and a biogeographical range encompassing present-day South Africa, China, Russia, India, Brazil, Uruguay, and Australia. This indicates a broader taxonomic, phylogenetic and biogeographic diversification of Proterosuchidae than previously thought in the aftermath of the end-Permian mass extinction.
DOI: 10.15468/dl.ye45bc
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Material sample)",
 "Country is Mongolia",
 "OccurrenceStatus is Present",
 "TaxonKey is Polypodiopsida"
 ]
}

 The dataset includes 125 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021429-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24202807.v1
title: Additional file 6 of Identifying pyroptosis- and inflammation-related genes in intracranial aneurysms based on bioinformatics analysis

description: Additional file 6. Table S6. The Node table of PPI network. Table S7. The Edge table of PPI network. Table S8. The topological measurements of PPI network
DOI: 10.6084/m9.figshare.24202813
title: Additional file 8 of Identifying pyroptosis- and inflammation-related genes in intracranial aneurysms based on bioinformatics analysis

description: Additional file 8. Table S9. Immunoinfiltration score. Table S10. Correlation analysis of 22 kinds of immune cells
DOI: 10.6084/m9.figshare.24202813.v1
title: Additional file 8 of Identifying pyroptosis- and inflammation-related genes in intracranial aneurysms based on bioinformatics analysis

description: Additional file 8. Table S9. Immunoinfiltration score. Table S10. Correlation analysis of 22 kinds of immune cells
DOI: 10.5519/qd.3o0s4b91
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (60 records)
DOI: 10.5519/qd.k5z8k694
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (60 records)
DOI: 10.6084/m9.figshare.12668726
title: CCCSL: CSH Covid-19 Control Strategies List

description: This dataset records the government interventions in response to Covid-19 and their respective timelines of implementation in .csv format
DOI: 10.6084/m9.figshare.12668726.v1
title: CCCSL: CSH Covid-19 Control Strategies List

description: This dataset records the government interventions in response to Covid-19 and their respective timelines of implementation in .csv format
DOI: 10.6084/m9.figshare.22624415
title: Additional file 5 of Comprehensive molecular characterization of complete mitogenome assemblies of 33 Eimeria isolates infecting domestic chickens

description: Additional file 5: Table S5. Wrights Fixation Index (FST) values of Chinese and Australian chicken Eimeria species based on their mitochondrial concatenate PCGs.
DOI: 10.6084/m9.figshare.22624403
title: Additional file 1 of Comprehensive molecular characterization of complete mitogenome assemblies of 33 Eimeria isolates infecting domestic chickens

description: Additional file 1: Table S1. List of primer pairs for PCR amplifications and their positions in the mitogenome of Eimeria isolate 1.
DOI: 10.6084/m9.figshare.22624403.v1
title: Additional file 1 of Comprehensive molecular characterization of complete mitogenome assemblies of 33 Eimeria isolates infecting domestic chickens

description: Additional file 1: Table S1. List of primer pairs for PCR amplifications and their positions in the mitogenome of Eimeria isolate 1.
DOI: 10.5281/zenodo.10634191
title: Assessment of Outdoor Thermal Comfort in a Hot Summer  Region of Europe

description: Heat waves are increasingly frequent in Europe, especially in South European countries during the summer season. The intensity and frequency of these heat waves have increased significantly in recent years. Spain, as one of the southern European countries most affected by these recurring heat waves, particularly experiences this phenomenon in touristic cities such as Cordoba. The aim of this study was to perform an experimental assessment of outdoor thermal comfort in a typical three-hour tourist walkable path of the historical center of Cordoba. The experimental study was carried out in the three-hour period of higher temperatures from 16:30 to 19:30 h CEST (UTC+2) on a normal summer day (6 July 2023), a day with a heat wave (28 June 2023) and a day with a higher heat intensity, called a super heat wave (10 August 2023). Environmental conditions such as a radiant temperature, ambient temperature, wet bulb temperature, air velocity and relative humidity were measured at three different heights corresponding to 0.1 (ankles), 0.7 (abdomen) and 1.7 (head) m. The results show extremely high levels of heat stress in all bioclimatic indices throughout the route. Cumulative heat stress ranged from “very hot” conditions at the beginning of the route to becoming “highly sweltering” at the end of the route. The average temperature excess over the thermal comfort threshold was very high and increased with the heat intensity. In addition, a correlation analysis was carried out between the bioclimatic indices studied, with the UTCI index standing out for its strong correlation with other thermal comfort indices. The findings emphasize the need for interventions to improve the urban environment and promote better outdoor thermal comfort for city dwellers through measures such as green infrastructure, UHI mitigation and increasing public awareness.
DOI: 10.5281/zenodo.10634192
title: Assessment of Outdoor Thermal Comfort in a Hot Summer  Region of Europe

description: Heat waves are increasingly frequent in Europe, especially in South European countries during the summer season. The intensity and frequency of these heat waves have increased significantly in recent years. Spain, as one of the southern European countries most affected by these recurring heat waves, particularly experiences this phenomenon in touristic cities such as Cordoba. The aim of this study was to perform an experimental assessment of outdoor thermal comfort in a typical three-hour tourist walkable path of the historical center of Cordoba. The experimental study was carried out in the three-hour period of higher temperatures from 16:30 to 19:30 h CEST (UTC+2) on a normal summer day (6 July 2023), a day with a heat wave (28 June 2023) and a day with a higher heat intensity, called a super heat wave (10 August 2023). Environmental conditions such as a radiant temperature, ambient temperature, wet bulb temperature, air velocity and relative humidity were measured at three different heights corresponding to 0.1 (ankles), 0.7 (abdomen) and 1.7 (head) m. The results show extremely high levels of heat stress in all bioclimatic indices throughout the route. Cumulative heat stress ranged from “very hot” conditions at the beginning of the route to becoming “highly sweltering” at the end of the route. The average temperature excess over the thermal comfort threshold was very high and increased with the heat intensity. In addition, a correlation analysis was carried out between the bioclimatic indices studied, with the UTCI index standing out for its strong correlation with other thermal comfort indices. The findings emphasize the need for interventions to improve the urban environment and promote better outdoor thermal comfort for city dwellers through measures such as green infrastructure, UHI mitigation and increasing public awareness.
DOI: 10.6084/m9.figshare.22624409
title: Additional file 3 of Comprehensive molecular characterization of complete mitogenome assemblies of 33 Eimeria isolates infecting domestic chickens

description: Additional file 3: Table S3. Gene sizes in the mitogenomes of 66 chicken Eimeria parasites.
DOI: 10.6084/m9.figshare.22624412
title: Additional file 4 of Comprehensive molecular characterization of complete mitogenome assemblies of 33 Eimeria isolates infecting domestic chickens

description: Additional file 4: Table S4. Pairwise genetic divergences of 33 chicken Eimeria parasites based on mitogenome datasets.
DOI: 10.6084/m9.figshare.22624409.v1
title: Additional file 3 of Comprehensive molecular characterization of complete mitogenome assemblies of 33 Eimeria isolates infecting domestic chickens

description: Additional file 3: Table S3. Gene sizes in the mitogenomes of 66 chicken Eimeria parasites.
DOI: 10.6084/m9.figshare.22624412.v1
title: Additional file 4 of Comprehensive molecular characterization of complete mitogenome assemblies of 33 Eimeria isolates infecting domestic chickens

description: Additional file 4: Table S4. Pairwise genetic divergences of 33 chicken Eimeria parasites based on mitogenome datasets.
DOI: 10.6084/m9.figshare.22624415.v1
title: Additional file 5 of Comprehensive molecular characterization of complete mitogenome assemblies of 33 Eimeria isolates infecting domestic chickens

description: Additional file 5: Table S5. Wrights Fixation Index (FST) values of Chinese and Australian chicken Eimeria species based on their mitochondrial concatenate PCGs.
DOI: 10.6084/m9.figshare.10047437
title: Additional file 1: of Characterization of S40-like proteins and their roles in response to environmental cues and leaf senescence in rice

description: Table S1. Primers used for semi qRT-PCR for expression analysis of OsS40 genes. Table S2. Primers used for qRT-PCR for expression analysis of OsS40 genes. Table S3. Primers used for systemic subcellular localization assays. (ZIP 244 kb)
DOI: 10.6084/m9.figshare.10047437.v1
title: Additional file 1: of Characterization of S40-like proteins and their roles in response to environmental cues and leaf senescence in rice

description: Table S1. Primers used for semi qRT-PCR for expression analysis of OsS40 genes. Table S2. Primers used for qRT-PCR for expression analysis of OsS40 genes. Table S3. Primers used for systemic subcellular localization assays. (ZIP 244 kb)
DOI: 10.6084/m9.figshare.22624444.v1
title: Additional file 10 of Uterine luminal-derived extracellular vesicles: potential nanomaterials to improve embryo implantation

description: Additional file 10: Table S6. Differentially abundant proteins in PTR cells treated with ULF-Evs.
DOI: 10.6084/m9.figshare.22621051.v1
title: Additional file 1 of Genome-wide analysis of key gene families in RNA silencing and their responses to biotic and drought stresses in adzuki bean

description: Additional file 1: Figure S1. MiRNA targets identified by psRobot. Table S1. Promoter analysis of VaDCLs. Table S2. Promoter analysis of VaAGOs. Table S3. Promoter analysis of VaRDRs. Table S4. Primers used in the QRT-PCR analysis.
DOI: 10.6084/m9.figshare.22624432.v1
title: Additional file 6 of Uterine luminal-derived extracellular vesicles: potential nanomaterials to improve embryo implantation

description: Additional file 6: Table S2. Relative abundance of proteins in the uterine luminal fluid-Evs.
DOI: 10.6084/m9.figshare.22624438.v1
title: Additional file 8 of Uterine luminal-derived extracellular vesicles: potential nanomaterials to improve embryo implantation

description: Additional file 8: Table S4. GO enrichment and KEGG pathway analysis of proteins in clusters 1 and 2.
DOI: 10.6084/m9.figshare.22624447
title: Additional file 11 of Uterine luminal-derived extracellular vesicles: potential nanomaterials to improve embryo implantation

description: Additional file 11: Table S7. GO enrichment and KEGG pathway analysis of differentially abundant proteins in PTR cells treated with ULF-Evs.
DOI: 10.6084/m9.figshare.12135285
title: Additional file 12 of Wide crossing diversify mitogenomes of rice

description: Additional file 12 Supplementary information 2
DOI: 10.6084/m9.figshare.22621096
title: Additional file 2 of Subclinical thyroid dysfunction and chronic kidney disease: a nationwide population-based study

description: Supplementary Material 2 Supporting information files_data set2
DOI: 10.6084/m9.figshare.12135300.v1
title: Additional file 2 of Characteristics of Clostridium difficile isolates and the burden of hospital-acquired Clostridium difficile infection in a tertiary teaching hospital in Chongqing, Southwest China

description: Additional file 2. The MICs of seven antimicrobial agents for isolates included in this study.
DOI: 10.5281/zenodo.10634111
title: Azolla cultivation enables phosphate extraction from inundated former agricultural soils

description: Unpublished data belonging to the PhD thesis chapter "Azolla cultivation enables phosphate extraction from inundated former agricultural soils", in:

Vroom, R.J.E. 2024. From meadows to marshes: cultivating plants to revive degraded wetlands. PhD thesis, Radboud Universiteit, Nijmegen, the Netherlands.
DOI: 10.5281/zenodo.10634112
title: Azolla cultivation enables phosphate extraction from inundated former agricultural soils

description: Unpublished data belonging to the PhD thesis chapter "Azolla cultivation enables phosphate extraction from inundated former agricultural soils", in:

Vroom, R.J.E. 2024. From meadows to marshes: cultivating plants to revive degraded wetlands. PhD thesis, Radboud Universiteit, Nijmegen, the Netherlands.
DOI: 10.6084/m9.figshare.12135285.v1
title: Additional file 12 of Wide crossing diversify mitogenomes of rice

description: Additional file 12 Supplementary information 2
DOI: 10.6084/m9.figshare.22621051
title: Additional file 1 of Genome-wide analysis of key gene families in RNA silencing and their responses to biotic and drought stresses in adzuki bean

description: Additional file 1: Figure S1. MiRNA targets identified by psRobot. Table S1. Promoter analysis of VaDCLs. Table S2. Promoter analysis of VaAGOs. Table S3. Promoter analysis of VaRDRs. Table S4. Primers used in the QRT-PCR analysis.
DOI: 10.6084/m9.figshare.22621091
title: Additional file 1 of Homeobox D9 drives the malignant phenotypes and enhances the Programmed death ligand-1 expression in non-small cell lung cancer cells via binding to Angiopoietin-2 promoter

description: Additional file 1.
DOI: 10.5281/zenodo.10634244
title: Interview with Moroccan writer Mohamed Hjiouij. 07/10/2022

description: Interview with Moroccan writer Mohammed Hjiouij (07/10/2022).

TRANSECT, the project leading to this interview, has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 101027040.
DOI: 10.5281/zenodo.7339645
title: Interview with Moroccan writer Mohamed Hjiouij. 07/10/2022

description: Interview with Moroccan writer Mohammed Hjiouij (07/10/2022).

TRANSECT, the project leading to this interview, has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 101027040.
DOI: 10.5281/zenodo.7339646
title: Interview with Moroccan writer Mohamed Hjiouij. 07/10/2022

description: Interview with Moroccan writer Mohammed Hjiouij (07/10/2022).
DOI: 10.6084/m9.figshare.12135327.v1
title: Additional file 10 of LncRNA regulates tomato fruit cracking by coordinating gene expression via a hormone-redox-cell wall network

description: Additional file 10: Table S8. Statistics for tomato cracking rate of ‘LA2683’ and ‘LA1698’.
DOI: 10.6084/m9.figshare.12135339
title: Additional file 1 of LncRNA regulates tomato fruit cracking by coordinating gene expression via a hormone-redox-cell wall network

description: Additional file 1: Table S1. LncRNAs in 12 tomato fruit libraries.
DOI: 10.6084/m9.figshare.12135345
title: Additional file 3 of LncRNA regulates tomato fruit cracking by coordinating gene expression via a hormone-redox-cell wall network

description: Additional file 3: Table S3. Number of differentially expressed mRNAs and lncRNAs in different libraries.
DOI: 10.6084/m9.figshare.12135339.v1
title: Additional file 1 of LncRNA regulates tomato fruit cracking by coordinating gene expression via a hormone-redox-cell wall network

description: Additional file 1: Table S1. LncRNAs in 12 tomato fruit libraries.
DOI: 10.6084/m9.figshare.12135342
title: Additional file 2 of LncRNA regulates tomato fruit cracking by coordinating gene expression via a hormone-redox-cell wall network

description: Additional file 2: Table S2. LncRNA-mRNA pairs were identified by cis-regulation.
DOI: 10.6084/m9.figshare.12135342.v1
title: Additional file 2 of LncRNA regulates tomato fruit cracking by coordinating gene expression via a hormone-redox-cell wall network

description: Additional file 2: Table S2. LncRNA-mRNA pairs were identified by cis-regulation.
DOI: 10.15156/bio/sh0902131.10fu
title: SH0902131.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0902132.10fu
title: SH0902132.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0902133.10fu
title: SH0902133.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0902134.10fu
title: SH0902134.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.