cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9777641.v2
title: breakdown_length_anonymised_data

description: Raw for publication submitted to PeerJ; <br>Bovine tuberculosis breakdown duration in cattle herds: an investigation of herd, host, pathogen and wildlife risk factors
DOI: 10.6084/m9.figshare.9777605
title: ProcessedData400JobAdvertisementsSoftwareTesters

description: The data in this file is the processed content of 400 job advertisements for software testers. The data is collected from 33 countries, in between 2016 and 2017. The content of the ads was split into skills and skill-categories.
DOI: 10.6084/m9.figshare.9777614
title: breakdown_length_anonymised_data.csv

description: Raw for publication submitted to PeerJ; <br>Bovine tuberculosis breakdown duration in cattle herds: an investigation of herd, host, pathogen and wildlife risk factors
DOI: 10.6084/m9.figshare.9777641.v1
title: breakdown_length_anonymised_data

description: Raw for publication submitted to PeerJ; <br>Bovine tuberculosis breakdown duration in cattle herds: an investigation of herd, host, pathogen and wildlife risk factors
DOI: 10.6084/m9.figshare.9777614.v1
title: breakdown_length_anonymised_data.csv

description: Raw for publication submitted to PeerJ; <br>Bovine tuberculosis breakdown duration in cattle herds: an investigation of herd, host, pathogen and wildlife risk factors
DOI: 10.6084/m9.figshare.9777596
title: Semantics of the internet: a political history

description: The history of the Internet has been narrated many times. However, political histories of the Internet with a non-US-centric focus are still an uncharted research area. This paper contributes to closing that research gap. It reconstructs the Internet’s history in Germany through the lens of semantic changes in press coverage on politics. In our investigation, we sought to analyse semantic change as a political history by drawing on insights concerning the relationship between semantic change and political conflict from the perspective of discourse theory and theoretical reflections on politicisation. The study follows our intuition that semantic struggles of the past leave traces in word contexts. Conversely, it uncovers semantic change by following the traces of semantic struggles in these contexts. In line with this rationale, we conducted a ‘blended reading’ of word contexts that relied on a quantitatively assisted qualitative text analysis. The study finds that the Internet has long been understood predominantly as a tool for politics in the political public. In the late 2000s, its perception as a highly politicised object of governance also became dominant. While the Internet was always associated with a medium and a public sphere, its characterisation changed from ‘web 1.0’ to a ‘web of corporations’.
DOI: 10.6084/m9.figshare.9777581
title: Use of fitness-related behavioral endpoints to assess the effects of 17<b>α</b>-ethinylestradiol on a brackish water population of common mummichog, <i>Fundulus heteroclitus</i>

description: Endocrine-disrupting chemicals like the estrogen mimic 17α-ethinylestradiol (EE2) are released into aquatic environments from various sources and can have pronounced effects on organisms and the health of the ecosystem. Exposed species experience morphological changes, but there is little research on behavioral alterations, especially in marine organisms. This study focuses on the mummichog, <i>Fundulus heteroclitus</i>, an estuarine species that is a common subject of ecotoxicology research. Mummichog were exposed to different amounts of EE2 (0 ng/L, 10 ng/L, and 100 ng/L) and their behavior was examined in fitness-related assays (Empty Tank, Novel Environment, Shoaling, Foraging) once per week for 4 weeks. Exposure was found to affect behavior, especially in the foraging and shoaling contexts. The higher dose had the greatest effects on behavior, such as increasing the amount of time individuals took to find food in the Foraging assay. Both doses impacted activity levels in the Shoaling assay and eating in the Foraging assay. Females were less bold than males overall, although EE2 exposure was not found to have a significant sex-specific effect on behavior. Exposure altered fitness-related behaviors and thus may generate evolutionary consequences. This study stresses the importance of examining marine species in addition to freshwater species in ecotoxicology studies and reinforces the utility of behavior as a useful and sensitive endpoint. Additionally, it adds to our understanding of behavior within this species in general.
DOI: 10.6084/m9.figshare.9777584
title: Dynamic imaging of the myosin-driven movement of phalloidin-labeled actin filament

description: pSIM imaging of the dynamic of the myosin-driven movement of phalloidin-labeled actin filament<br>Raw microscope image from conventional microscope GE DeltaVision OMX SR, SIM reconstruction result via the associated software SoftWoRx and the corresponding pSIM images<br><br>Pixel size: 80nm in raw data and 40 nm in high-resolution reconstructed data<br>Frame rate: 2 f.p.s.
DOI: 10.6084/m9.figshare.9777596.v1
title: Semantics of the internet: a political history

description: The history of the Internet has been narrated many times. However, political histories of the Internet with a non-US-centric focus are still an uncharted research area. This paper contributes to closing that research gap. It reconstructs the Internet’s history in Germany through the lens of semantic changes in press coverage on politics. In our investigation, we sought to analyse semantic change as a political history by drawing on insights concerning the relationship between semantic change and political conflict from the perspective of discourse theory and theoretical reflections on politicisation. The study follows our intuition that semantic struggles of the past leave traces in word contexts. Conversely, it uncovers semantic change by following the traces of semantic struggles in these contexts. In line with this rationale, we conducted a ‘blended reading’ of word contexts that relied on a quantitatively assisted qualitative text analysis. The study finds that the Internet has long been understood predominantly as a tool for politics in the political public. In the late 2000s, its perception as a highly politicised object of governance also became dominant. While the Internet was always associated with a medium and a public sphere, its characterisation changed from ‘web 1.0’ to a ‘web of corporations’.
DOI: 10.6084/m9.figshare.9777572
title: SYTOX orange-labeled DNA filaments

description: pSIM image of SYTOX orange-labeled DNA filaments<br>Raw microscope image from conventional microscope GE DeltaVision OMX SR, SIM reconstruction result via the associated software SoftWoRx and the corresponding pSIM images.<br>The log file of raw data is also provided<br>And the corresponding Max intensity projection (MIP) images are also provided.
DOI: 10.6084/m9.figshare.9777605.v1
title: ProcessedData400JobAdvertisementsSoftwareTesters

description: The data in this file is the processed content of 400 job advertisements for software testers. The data is collected from 33 countries, in between 2016 and 2017. The content of the ads was split into skills and skill-categories.
DOI: 10.6084/m9.figshare.9777581.v1
title: Use of fitness-related behavioral endpoints to assess the effects of 17<b>α</b>-ethinylestradiol on a brackish water population of common mummichog, <i>Fundulus heteroclitus</i>

description: Endocrine-disrupting chemicals like the estrogen mimic 17α-ethinylestradiol (EE2) are released into aquatic environments from various sources and can have pronounced effects on organisms and the health of the ecosystem. Exposed species experience morphological changes, but there is little research on behavioral alterations, especially in marine organisms. This study focuses on the mummichog, <i>Fundulus heteroclitus</i>, an estuarine species that is a common subject of ecotoxicology research. Mummichog were exposed to different amounts of EE2 (0 ng/L, 10 ng/L, and 100 ng/L) and their behavior was examined in fitness-related assays (Empty Tank, Novel Environment, Shoaling, Foraging) once per week for 4 weeks. Exposure was found to affect behavior, especially in the foraging and shoaling contexts. The higher dose had the greatest effects on behavior, such as increasing the amount of time individuals took to find food in the Foraging assay. Both doses impacted activity levels in the Shoaling assay and eating in the Foraging assay. Females were less bold than males overall, although EE2 exposure was not found to have a significant sex-specific effect on behavior. Exposure altered fitness-related behaviors and thus may generate evolutionary consequences. This study stresses the importance of examining marine species in addition to freshwater species in ecotoxicology studies and reinforces the utility of behavior as a useful and sensitive endpoint. Additionally, it adds to our understanding of behavior within this species in general.
DOI: 10.6084/m9.figshare.9777605.v3
title: ProcessedData400JobAdvertisementsSoftwareTesters

description: The data in this file is the processed content of 400 job advertisements for software testers. The data is collected from 33 countries, in between 2016 and 2017. The content of the ads was split into skills and skill-categories.
DOI: 10.6084/m9.figshare.9777551
title: Phalloidin-labeled actin in BAPE cells

description: pSIM image of Phalloidin-labeled actin in BAPE cells<br>Raw microscope image from conventional microscope GE DeltaVision OMX SR, SIM reconstruction result via the associated software SoftWoRx and the corresponding pSIM images<br>Pixel size: 80nm in raw data and 40 nm in high-resolution reconstructed data<br>Frame rate: 2 f.p.s.
DOI: 10.6084/m9.figshare.9777572.v1
title: SYTOX orange-labeled DNA filaments

description: pSIM image of SYTOX orange-labeled DNA filaments<br>Raw microscope image from conventional microscope GE DeltaVision OMX SR, SIM reconstruction result via the associated software SoftWoRx and the corresponding pSIM images.<br>The log file of raw data is also provided<br>And the corresponding Max intensity projection (MIP) images are also provided.
DOI: 10.6084/m9.figshare.9777605.v2
title: ProcessedData400JobAdvertisementsSoftwareTesters

description: The data in this file is the processed content of 400 job advertisements for software testers. The data is collected from 33 countries, in between 2016 and 2017. The content of the ads was split into skills and skill-categories.
DOI: 10.6084/m9.figshare.9777524
title: Online data from Migratory flight on the Pacific Flyway: strategies and tendencies of wind drift compensation

description: Data from 19 Pacific Flyway weather surveillance radar stations measuring migrant intensity, speed, and direction. Nocturnal measures were extracted during spring (March 1st to June 15th) and fall (August 1st to November 15th) from spring 1995 to spring 2018. Measures are weighted averages from 3km vertical profiles, collected every 30-minutes.
DOI: 10.6084/m9.figshare.9777515
title: Phalloidin-labeled actin in BAPE cells

description: pSIM image of Phalloidin-labeled actin in BAPE cells<br>Raw microscope image from conventional microscope GE DeltaVision OMX SR, SIM reconstruction result via the associated software SoftWoRx and the corresponding pSIM images.
DOI: 10.6084/m9.figshare.9777506
title: Data.rar

description: ERPs and Subjective data for different wood appearance
DOI: 10.6084/m9.figshare.9777506.v1
title: Data.rar

description: ERPs and Subjective data for different wood appearance
DOI: 10.6084/m9.figshare.9777488
title: Measure and calculations dataset from Thermodynamic properties of atrial fibrillation cryoablation: a model-based approach to improve knowledge on energy delivery

description: This Excel file reports the dataset supporting the article: "Thermodynamic properties of atrial fibrillation cryoablation: a model-based approach to improve knowledge on energy delivery"
DOI: 10.6084/m9.figshare.9777479
title: Genetic testing in fetuses with isolated agenesis of the corpus callosum

description: <b>Purpose:</b> The objectives of this study were to explore genetics pathogenesis of isolated agenesis of corpus callosum (ACC) and assess the utility of chromosomal microarray analysis (CMA) for genetic diagnosis of isolated ACC. <b>Methods:</b> We analyzed the genomes of 16 fetuses with isolated ACC using Afymetrix CytoScan HD arrays and conducted further bioinformatic analysis for one proband fetus with an abnormal copy number variation (CNV). <b>Results</b>: Of the 16 fetal samples examined, two (12.5%) had pathogenic CNVs and three (18.75%) had variants of unknown significance. Two cases, case 2 and case 9, were found to have pathogenic CNVs. Bioinformatic analyses indicated that the CNV of one fetus (case 9) contained 115 annotated coding genes, five of which (<i>SLC6A5</i>, <i>BDNF</i>, <i>ELP4</i>, <i>PAX6</i>, and <i>SLC1A2</i>) have been associated with neurodevelopment. Three of these genes (<i>SLC1A2</i>, <i>BDNF</i>, and <i>PAX6</i>) may play a key role in ACC development. GO cluster analysis of the implicated genes revealed strong representations of protein binding and metal ion binding functions. KEGG pathway analysis pointed to four pathways: longevity regulating pathway, amyotrophic lateral sclerosis, cocaine addiction, and autophagy-animal. <b>Conclusions:</b> BDNF, SLC1A2, and <i>PAX6</i> may be involved in the development of isolated ACC. CMA is a feasible technology for prenatal diagnosis of isolated ACC.
DOI: 10.6084/m9.figshare.9777479.v1
title: Genetic testing in fetuses with isolated agenesis of the corpus callosum

description: <b>Purpose:</b> The objectives of this study were to explore genetics pathogenesis of isolated agenesis of corpus callosum (ACC) and assess the utility of chromosomal microarray analysis (CMA) for genetic diagnosis of isolated ACC. <b>Methods:</b> We analyzed the genomes of 16 fetuses with isolated ACC using Afymetrix CytoScan HD arrays and conducted further bioinformatic analysis for one proband fetus with an abnormal copy number variation (CNV). <b>Results</b>: Of the 16 fetal samples examined, two (12.5%) had pathogenic CNVs and three (18.75%) had variants of unknown significance. Two cases, case 2 and case 9, were found to have pathogenic CNVs. Bioinformatic analyses indicated that the CNV of one fetus (case 9) contained 115 annotated coding genes, five of which (<i>SLC6A5</i>, <i>BDNF</i>, <i>ELP4</i>, <i>PAX6</i>, and <i>SLC1A2</i>) have been associated with neurodevelopment. Three of these genes (<i>SLC1A2</i>, <i>BDNF</i>, and <i>PAX6</i>) may play a key role in ACC development. GO cluster analysis of the implicated genes revealed strong representations of protein binding and metal ion binding functions. KEGG pathway analysis pointed to four pathways: longevity regulating pathway, amyotrophic lateral sclerosis, cocaine addiction, and autophagy-animal. <b>Conclusions:</b> BDNF, SLC1A2, and <i>PAX6</i> may be involved in the development of isolated ACC. CMA is a feasible technology for prenatal diagnosis of isolated ACC.
DOI: 10.6084/m9.figshare.9777488.v1
title: Measure and calculations dataset from Thermodynamic properties of atrial fibrillation cryoablation: a model-based approach to improve knowledge on energy delivery

description: This Excel file reports the dataset supporting the article: "Thermodynamic properties of atrial fibrillation cryoablation: a model-based approach to improve knowledge on energy delivery"
DOI: 10.6084/m9.figshare.9777473
title: The Comorbidity of Chronic Obstructive Pulmonary Disease and Peripheral Artery Disease – A Systematic Review

description: The comorbidity of peripheral arterial disease (PAD) and chronic obstructive pulmonary disease (COPD) is obvious from a clinical point of view, especially as smoking is an important risk factor for both. Another factor connecting these two clinical conditions is chronic inflammation, which plays a crucial role in their pathophysiology. The aim of this study was to present the prevalence of COPD in patients with PAD, as well as the prevalence of PAD in COPD patients confirmed in all patients by two reliable methods: spirometry and ankle-brachial index (ABI), respectively. The MEDLINE, EMBASE, and Cochrane Database of Systematic Reviews were searched to identify the potentially eligible publications from the previous 10 years. The published characteristics of different PAD and COPD populations were analyzed. A database search identified 894 records. Reliable criteria of both COPD and PAD diagnosis were used only in seven publications. The prevalence of PAD among patients with COPD ranged from 8.5 to 81.4%. The severity of the disease and the exclusion of nonsmokers or symptomatic patients from the analyses were important factors affecting this parameter. The prevalence of COPD in patients with PAD was measured reliably only in one study and assessed as 27.2%. The comorbidity of COPD and PAD is a relatively common occurrence. There are very few publications addressing this issue based on reliable diagnostic criteria, especially in the field of PAD. In the case of COPD and PAD patients, spirometry and ABI measurements are worth considering as noninvasive screening tests for COPD and PAD, respectively.
DOI: 10.6084/m9.figshare.9777473.v1
title: The Comorbidity of Chronic Obstructive Pulmonary Disease and Peripheral Artery Disease – A Systematic Review

description: The comorbidity of peripheral arterial disease (PAD) and chronic obstructive pulmonary disease (COPD) is obvious from a clinical point of view, especially as smoking is an important risk factor for both. Another factor connecting these two clinical conditions is chronic inflammation, which plays a crucial role in their pathophysiology. The aim of this study was to present the prevalence of COPD in patients with PAD, as well as the prevalence of PAD in COPD patients confirmed in all patients by two reliable methods: spirometry and ankle-brachial index (ABI), respectively. The MEDLINE, EMBASE, and Cochrane Database of Systematic Reviews were searched to identify the potentially eligible publications from the previous 10 years. The published characteristics of different PAD and COPD populations were analyzed. A database search identified 894 records. Reliable criteria of both COPD and PAD diagnosis were used only in seven publications. The prevalence of PAD among patients with COPD ranged from 8.5 to 81.4%. The severity of the disease and the exclusion of nonsmokers or symptomatic patients from the analyses were important factors affecting this parameter. The prevalence of COPD in patients with PAD was measured reliably only in one study and assessed as 27.2%. The comorbidity of COPD and PAD is a relatively common occurrence. There are very few publications addressing this issue based on reliable diagnostic criteria, especially in the field of PAD. In the case of COPD and PAD patients, spirometry and ABI measurements are worth considering as noninvasive screening tests for COPD and PAD, respectively.
DOI: 10.6084/m9.figshare.9777410
title: Transcriptomes of Camellia sinensis dedifferentiated and redifferentiated tissues during tissue culture

description: Supplementary files from this study including unigene annotations against Clusters of Orthologous Groups of proteins (COG) databases, Gene Ontology (GO) databases, Kyoto Encyclopaedia of Genes and Genomes (KEGG), euKaryotic Orthologous Groups (KOG), Protein family (Pfam) databases, Swiss-prot, eggNOG, and Nonredundant (Nr) protein databases. Besides, the SSR and SNP results were also included.<br>
DOI: 10.6084/m9.figshare.9777410.v1
title: Transcriptomes of Camellia sinensis dedifferentiated and redifferentiated tissues during tissue culture

description: Supplementary files from this study including unigene annotations against Clusters of Orthologous Groups of proteins (COG) databases, Gene Ontology (GO) databases, Kyoto Encyclopaedia of Genes and Genomes (KEGG), euKaryotic Orthologous Groups (KOG), Protein family (Pfam) databases, Swiss-prot, eggNOG, and Nonredundant (Nr) protein databases. Besides, the SSR and SNP results were also included.<br>
DOI: 10.15468/p4jnjn
title: A new species of Mesochra (Copepoda: Harpacticoida: Canthocamptidae) from a coastal system of northern Colombia with a key to the American species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Suárez-Morales, Eduardo, Fuentes-Reinés, Juan M. (2015): A new species of Mesochra (Copepoda: Harpacticoida: Canthocamptidae) from a coastal system of northern Colombia with a key to the American species. Journal of Natural History 49 (45): 2969-2982, DOI: 10.1080/00222933.2015.1085604
DOI: 10.6084/m9.figshare.9777299
title: Differential expressed LncRNAs, protein-coding genes, and miRNAs

description: Differential expressed lncRNAs, protein-coding genes, and miRNAs for patients before and after CD19-CAR-T therapy
DOI: 10.6084/m9.figshare.9777251
title: QC_files_4_sRNA-Seq

description: This data is used to deposit the QC files of sRNA-Seq samples from 4 patients with CAR-T therapy
DOI: 10.6084/m9.figshare.9777260
title: The expression profiles

description: Deposition for the expression profiles of genes and miRNAs from 4 patients before and after CAR-T therapy
DOI: 10.6084/m9.figshare.9777260.v1
title: The expression profiles

description: Deposition for the expression profiles of genes and miRNAs from 4 patients before and after CAR-T therapy
DOI: 10.6084/m9.figshare.9777251.v1
title: QC_files_4_sRNA-Seq

description: This data is used to deposit the QC files of sRNA-Seq samples from 4 patients with CAR-T therapy
DOI: 10.6084/m9.figshare.9777212
title: MOESM1 of Epidemiological findings and policy implications from the nationwide schistosomiasis and intestinal helminthiasis survey in Sudan

description: Additional file 1: Table S1. Prevalence of schistosomiasis by grade. Table S2. Other helminthiases prevalence. Table S3. Schistosomiasis haematobium prevalence by state, locality and ecological zone. Table S4. Schistosomiasis mansoni prevalence by state, locality and ecological zone. Table S5. MDA target areas (community-wide at 8% a threshold). Table S6. MDA target areas (community-wide at a 15% threshold). Table S7. MDA target areas (school-aged children at a 3% threshold). Table S8. MDA target areas (school-aged children at a 5% threshold).
DOI: 10.6084/m9.figshare.9777248
title: QC_files_4_RNA-Seq

description: This data is used to store the QC files for the sequencing samples
DOI: 10.6084/m9.figshare.9777212.v1
title: MOESM1 of Epidemiological findings and policy implications from the nationwide schistosomiasis and intestinal helminthiasis survey in Sudan

description: Additional file 1: Table S1. Prevalence of schistosomiasis by grade. Table S2. Other helminthiases prevalence. Table S3. Schistosomiasis haematobium prevalence by state, locality and ecological zone. Table S4. Schistosomiasis mansoni prevalence by state, locality and ecological zone. Table S5. MDA target areas (community-wide at 8% a threshold). Table S6. MDA target areas (community-wide at a 15% threshold). Table S7. MDA target areas (school-aged children at a 3% threshold). Table S8. MDA target areas (school-aged children at a 5% threshold).
DOI: 10.6084/m9.figshare.9777248.v1
title: QC_files_4_RNA-Seq

description: This data is used to store the QC files for the sequencing samples
DOI: 10.6084/m9.figshare.9777140
title: Additional file 2: of SamPler – a novel method for selecting parameters for gene functional annotation routines

description: SamPler demonstration. Results obtained after applying SamPler procedure to 4 genome functional annotations. (XLSX 65 kb)
DOI: 10.6084/m9.figshare.9777140.v1
title: Additional file 2: of SamPler – a novel method for selecting parameters for gene functional annotation routines

description: SamPler demonstration. Results obtained after applying SamPler procedure to 4 genome functional annotations. (XLSX 65 kb)