cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14737841.v1
title: A multi-locus approach to discern conservation units and adaptive potential of Pacific black ducks across Australia and surrounding islands

description: Genetic diversity, population delineation and rates of gene flow can be used to help understand long-term population dynamics, which is important for conserving species with fragmented distributions. Here, we sequenced 19 nuclear introns (nuDNA) and a portion of mitochondrial DNA (mtDNA) across three subspecies of Pacific black ducks (<i>Anas superciliosa</i> ssp.; <i>N</i><sub>mtDNA</sub> = 162; <i>N</i><sub>nuDNA</sub> = 49) from Australia and surrounding islands in order to measure levels of genetic structure and gene flow. First, despite evidence of gene flow from Australia, Pacific black ducks from the Solomon Islands were significantly differentiated from all other groups in both mtDNA and nuDNA. This is probably due to genetic drift resulting in lowered genetic diversity. We found the lowest levels of genetic differentiation between locations sampled in Australia, suggesting strong connectivity across the continent. Despite elevated differentiation in mtDNA between Australia and other islands (i.e. Timor, New Zealand), low nuDNA divergence suggests some connectivity. Such marker discord is common among waterfowl and is likely due to male-biased dispersal from Australia. Finally, mtDNA of Pacific black ducks from New Zealand showed introgression of haplotypes from feral mallards (<i>A. platyrhynchos</i>), which were established in the 1800s. Overall, these data suggest that <i>A. superciliosa</i> ssp. consist of three distinct genetic units that correspond with subspecies classifications and require individual conservation planning.
DOI: 10.6084/m9.figshare.15059544
title: sample.xlsx

description: sample
DOI: 10.6084/m9.figshare.15059544.v1
title: sample.xlsx

description: sample
DOI: 10.26180/15111234.v1
title: GrappaDL experimental data

description: This is the experimental data for the Figure.9 of the paper:<br>Pawar K, Egan GF, Chen Z, Domain Knowledge Augmentation of Parallel MR Image Reconstruction using Deep Learning, Computerized Medical Imaging and Graphics(2021), doi:https://doi.org/10.1016/j.compmedimag.2021.101968<br>
DOI: 10.26180/15111234
title: GrappaDL experimental data

description: This is the experimental data for the Figure.9 of the paper:<br>Pawar K, Egan GF, Chen Z, Domain Knowledge Augmentation of Parallel MR Image Reconstruction using Deep Learning, Computerized Medical Imaging and Graphics(2021), doi:https://doi.org/10.1016/j.compmedimag.2021.101968<br>
DOI: 10.5517/ccdc.csd.cc27njp4
title: CCDC 2075316: Experimental Crystal Structure Determination

description: Related Article: Xinyi He, Yanwei Wang, Dan Yuan, Hongpeng You, Yingming Yao|2021|Inorg.Chem.|60|11521|doi:10.1021/acs.inorgchem.1c01542
DOI: 10.5517/ccdc.csd.cc27xwdg
title: CCDC 2083336: Experimental Crystal Structure Determination

description: Related Article: Xiaoxu Wang, Jing Ke, Yiling Zhu, Arghya Deb, Yijie Xu, X. Peter Zhang|2021|J.Am.Chem.Soc.|143|11121|doi:10.1021/jacs.1c04655
DOI: 10.5517/ccdc.csd.cc27xwfh
title: CCDC 2083337: Experimental Crystal Structure Determination

description: Related Article: Xiaoxu Wang, Jing Ke, Yiling Zhu, Arghya Deb, Yijie Xu, X. Peter Zhang|2021|J.Am.Chem.Soc.|143|11121|doi:10.1021/jacs.1c04655
DOI: 10.5517/ccdc.csd.cc27xwgj
title: CCDC 2083338: Experimental Crystal Structure Determination

description: Related Article: Xiaoxu Wang, Jing Ke, Yiling Zhu, Arghya Deb, Yijie Xu, X. Peter Zhang|2021|J.Am.Chem.Soc.|143|11121|doi:10.1021/jacs.1c04655
DOI: 10.5517/ccdc.csd.cc27xwhk
title: CCDC 2083339: Experimental Crystal Structure Determination

description: Related Article: Xiaoxu Wang, Jing Ke, Yiling Zhu, Arghya Deb, Yijie Xu, X. Peter Zhang|2021|J.Am.Chem.Soc.|143|11121|doi:10.1021/jacs.1c04655
DOI: 10.5517/ccdc.csd.cc27njm2
title: CCDC 2075314: Experimental Crystal Structure Determination

description: Related Article: Xinyi He, Yanwei Wang, Dan Yuan, Hongpeng You, Yingming Yao|2021|Inorg.Chem.|60|11521|doi:10.1021/acs.inorgchem.1c01542
DOI: 10.5517/ccdc.csd.cc27njn3
title: CCDC 2075315: Experimental Crystal Structure Determination

description: Related Article: Xinyi He, Yanwei Wang, Dan Yuan, Hongpeng You, Yingming Yao|2021|Inorg.Chem.|60|11521|doi:10.1021/acs.inorgchem.1c01542
DOI: 10.5517/ccdc.csd.cc27njs7
title: CCDC 2075319: Experimental Crystal Structure Determination

description: Related Article: Xinyi He, Yanwei Wang, Dan Yuan, Hongpeng You, Yingming Yao|2021|Inorg.Chem.|60|11521|doi:10.1021/acs.inorgchem.1c01542
DOI: 10.48370/ofd/gwqvsm/g9mefq
title: 0619A-0002.jpg

description: :unav
DOI: 10.48370/ofd/gwqvsm/mgme39
title: HMW_Euphorbia_esula_L_H_7767.jpg

description: :unav
DOI: 10.48370/ofd/gwqvsm
title: Wilczomlecz lancetowaty (Euphorbia esula L.), 7767

description: Herbarium
DOI: 10.48370/ofd/tkmh54/qvqueb
title: 0619A-0001.jpg

description: :unav
DOI: 10.48370/ofd/tkmh54/mokb2y
title: HMW_Euphorbia_esula_L_H_7764.jpg

description: :unav
DOI: 10.48370/ofd/tkmh54
title: Wilczomlecz lancetowaty (Euphorbia esula L.), 7764

description: Herbarium
DOI: 10.48370/ofd/lkctza/wpg5mm
title: 0619B-0027.jpg

description: :unav
DOI: 10.48370/ofd/lkctza/dpblay
title: HMW_Euphorbia_esula_L_H_7961.jpg

description: :unav
DOI: 10.48370/ofd/lkctza
title: Wilczomlecz lancetowaty (Euphorbia esula L.), 7961

description: Herbarium
DOI: 10.48370/ofd/g50ob9/ugcmxm
title: HMW_Euphorbia_amygdaloides_L._H_3339.jpg

description: :unav
DOI: 10.48370/ofd/g50ob9
title: Wilczomlecz migdałolistny (Euphorbia amygdaloides L.), 3339

description: Herbarium
DOI: 10.48370/ofd/lurtlf/nhvgsb
title: HMW_Euphorbia_amygdaloides_L._H_4721.jpg

description: :unav
DOI: 10.48370/ofd/lurtlf
title: Wilczomlecz migdałolistny (Euphorbia amygdaloides L.), 4721

description: Herbarium
DOI: 10.48370/ofd/prenno/eibxzw
title: HMW_Euphorbia_amygdaloides_L._H_4803.jpg

description: :unav
DOI: 10.48370/ofd/prenno
title: Wilczomlecz migdałolistny (Euphorbia amygdaloides L.), 4803

description: Herbarium
DOI: 10.48370/ofd/0gg9h2/scfyjz
title: HMW_Euphorbia_amygdaloides_L._H_5573.jpg

description: :unav
DOI: 10.48370/ofd/0gg9h2
title: Wilczomlecz migdałolistny (Euphorbia amygdaloides L.), 5573

description: Herbarium
DOI: 10.48370/ofd/ofp8o2/6fedjt
title: HMW_Euphorbia_amygdaloides_L._H_7762.jpg

description: :unav
DOI: 10.48370/ofd/ofp8o2
title: Wilczomlecz migdałolistny (Euphorbia amygdaloides L.), 7762

description: Herbarium
DOI: 10.48370/ofd/drzdtx/5vktso
title: HMW_Euphorbia_virgultosa_Klokov_H_1049.jpg

description: :unav
DOI: 10.48370/ofd/drzdtx
title: Wilczomlecz miotlasty (Euphorbia virgultosa Klokov), 1049

description: Herbarium
DOI: 10.48370/ofd/g7th5f/hwex43
title: HMW_Euphorbia_virgultosa_Klokov_H_1474.jpg

description: :unav
DOI: 10.48370/ofd/g7th5f
title: Wilczomlecz miotlasty (Euphorbia virgultosa Klokov), 1474

description: Herbarium
DOI: 10.48370/ofd/qdajjz/szsqip
title: HMW_Euphorbia_virgultosa_Klokov_H_1811.jpg

description: :unav
DOI: 10.48370/ofd/qdajjz
title: Wilczomlecz miotlasty (Euphorbia virgultosa Klokov), 1811

description: Herbarium
DOI: 10.48370/ofd/p34cas/7bjtji
title: HMW_Euphorbia_virgultosa_Klokov_H_6977.jpg

description: :unav
DOI: 10.48370/ofd/p34cas
title: Wilczomlecz miotlasty (Euphorbia virgultosa Klokov), 6977

description: Herbarium
DOI: 10.48370/ofd/npcpm6/uq7iy9
title: HMW_Euphorbia_helioscopia_L._H_1938.jpg

description: :unav
DOI: 10.48370/ofd/npcpm6
title: Wilczomlecz obrotny (Euphorbia helioscopia L.), 1938

description: Herbarium
DOI: 10.48370/ofd/qebesq/rmsvft
title: HMW_Euphorbia_helioscopia_L._H_0031.jpg

description: :unav
DOI: 10.48370/ofd/qebesq
title: Wilczomlecz obrotny (Euphorbia helioscopia L.), 31

description: Herbarium
DOI: 10.48370/ofd/plvm8x/mwggjr
title: HMW_Euphorbia_helioscopia_L._H_3430.jpg

description: :unav
DOI: 10.48370/ofd/plvm8x
title: Wilczomlecz obrotny (Euphorbia helioscopia L.), 3430

description: Herbarium
DOI: 10.48370/ofd/ijirju/5ajpik
title: HMW_Euphorbia_helioscopia_L._H_5064.jpg

description: :unav
DOI: 10.48370/ofd/ijirju
title: Wilczomlecz obrotny (Euphorbia helioscopia L.), 5064

description: Herbarium
DOI: 10.48370/ofd/vtdeiw/hs0htz
title: HMW_Euphorbia_helioscopia_L._H_5596.jpg

description: :unav
DOI: 10.48370/ofd/vtdeiw
title: Wilczomlecz obrotny (Euphorbia helioscopia L.), 5596

description: Herbarium
DOI: 10.48370/ofd/cwuchx/frfsfz
title: HMW_Euphorbia_helioscopia_L._H_6716.jpg

description: :unav
DOI: 10.48370/ofd/cwuchx
title: Wilczomlecz obrotny (Euphorbia helioscopia L.), 6716

description: Herbarium
DOI: 10.48370/ofd/6tyauo/goflco
title: HMW_Euphorbia_helioscopia_L._H_7203.jpg

description: :unav
DOI: 10.48370/ofd/6tyauo
title: Wilczomlecz obrotny (Euphorbia helioscopia L.), 7203

description: Herbarium
DOI: 10.48370/ofd/u8zvaj/00trqb
title: HMW_Euphorbia_helioscopia_L._H_7989.jpg

description: :unav
DOI: 10.48370/ofd/u8zvaj
title: Wilczomlecz obrotny (Euphorbia helioscopia L.), 7989

description: Herbarium
DOI: 10.48370/ofd/8nslc2/qbljzk
title: HMW_Euphorbia_marginata_Pursh_H_3686.jpg

description: :unav
DOI: 10.48370/ofd/8nslc2
title: Wilczomlecz obrzeżony (Euphorbia marginata Pursh), 3686

description: Herbarium
DOI: 10.48370/ofd/qdkylr/hw0ej7
title: HMW_Euphorbia_marginata_Pursh_H_4715.jpg

description: :unav
DOI: 10.48370/ofd/qdkylr
title: Wilczomlecz obrzeżony (Euphorbia marginata Pursh), 4715

description: Herbarium
DOI: 10.48370/ofd/jbpd2r/19q8gn
title: HMW_Euphorbia_cyparissias_L._H_0265.jpg

description: :unav
DOI: 10.48370/ofd/jbpd2r
title: Wilczomlecz sosnka (Euphorbia cyparissias L.), 265

description: Herbarium
DOI: 10.48370/ofd/s3xhtm/djw8uo
title: HMW_Euphorbia_cyparissias_L._H_0030.jpg

description: :unav
DOI: 10.48370/ofd/s3xhtm
title: Wilczomlecz sosnka (Euphorbia cyparissias L.), 30

description: Herbarium
DOI: 10.48370/ofd/ewls4k/umncgi
title: HMW_Euphorbia_cyparissias_L._H_7182.jpg

description: :unav
DOI: 10.48370/ofd/ewls4k
title: Wilczomlecz sosnka (Euphorbia cyparissias L.), 7182

description: Herbarium
DOI: 10.48370/ofd/wmpxed/hs7sep
title: HMW_Euphorbia_cyparissias_L._H_7603.jpg

description: :unav
DOI: 10.48370/ofd/wmpxed
title: Wilczomlecz sosnka (Euphorbia cyparissias L.), 7603

description: Herbarium
DOI: 10.48370/ofd/4unuds/usvqog
title: HMW_Euphorbia_cyparissias_L._H_7672.jpg

description: :unav
DOI: 10.48370/ofd/4unuds
title: Wilczomlecz sosnka (Euphorbia cyparissias L.), 7672

description: Herbarium
DOI: 10.48370/ofd/ukspi0/xitxug
title: HMW_Euphorbia_cyparissias_L._H_9036.jpg

description: :unav
DOI: 10.48370/ofd/ukspi0
title: Wilczomlecz sosnka (Euphorbia cyparissias L.), 9036

description: Herbarium
DOI: 10.48370/ofd/xyc6lm/8rynuy
title: HMW_Euphorbia_platyphyllos_L._H_3321.jpg

description: :unav
DOI: 10.48370/ofd/xyc6lm
title: Wilczomlecz szerokolistny (Euphorbia platyphyllos L.), 3321

description: Herbarium
DOI: 10.48370/ofd/uitrqg/gbcxry
title: HMW_Euphorbia_platyphyllos_L._H_5305.jpg

description: :unav
DOI: 10.48370/ofd/uitrqg
title: Wilczomlecz szerokolistny (Euphorbia platyphyllos L.), 5305

description: Herbarium
DOI: 10.48370/ofd/zjbvpo/tkkyfv
title: HMW_Euphorbia_platyphyllos_L._H_7755.jpg

description: :unav
DOI: 10.48370/ofd/zjbvpo
title: Wilczomlecz szerokolistny (Euphorbia platyphyllos L.), 7755

description: Herbarium
DOI: 10.6084/m9.figshare.15111765
title: Sequencing and assembly metrics

description: Summary of ONT sequencing and <i>de novo</i> assembly of EnvD and EnvH isolates. The number of reads, mean length reads and coverage were obtained by the Guppy v 4.4.2 basecaller. <i>De novo</i> assembly was conducted by Flye.
DOI: 10.48370/ofd/y9m16g/slykr3
title: HMW_Euphorbia_serrulata_Thuill._H_3336.jpg

description: :unav
DOI: 10.48370/ofd/y9m16g
title: Wilczomlecz sztywny (Euphorbia serrulata Thuill.), 3336

description: Herbarium
DOI: 10.48370/ofd/ttsul1/papkj2
title: HMW_Euphorbia_serrulata_Thuill._H_4732.jpg

description: :unav
DOI: 10.6084/m9.figshare.21542229.v1
title: Additional file 6 of Integrated next-generation sequencing and comparative transcriptomic analysis of leaves provides novel insights into the ethylene pathway of Chrysanthemum morifolium in response to a Chinese isolate of chrysanthemum virus B

description: Additional file 6: Table S5. Summary of transcripts and unigenes assembled using the Trinity software.
DOI: 10.5281/zenodo.8349192
title: Dataset from "Channelrhodopsin-2 Oligomerization in Cell Membrane Revealed by Photo-Activated Localization Microscopy" (b1AR-mEos3.2)

description: This dataset contains raw microscopy data from the article "Channelrhodopsin-2 Oligomerization in Cell Membrane Revealed by Photo-Activated Localization Microscopy" (doi.org/10.1002/anie.202307555)

Zip file contains PALM measurements of HEK293 cells expressing ß1AR fused with mEos3.2.Each folder in .zip file contains one PALM measurement (TIFF format) and recording settings (.xml) automatically created by acquiring software. For technical reasons, single measurements are divided into TIFF files of =<4088 frames.

Detailed protocols for sample preparation and data acquisition are described in the article.Some details are listed below.

SAMPLE PREPARATION

cell line: Flp-In™ T-REx™ 293transfection method: modified calcium-phosphate transient transfection [1]fixation method: 4% paraformaldehyde solution in PBS for 30 min at room temperatureimaging buffer: PBS

PALM ACQUISITION

A custom-built setup for single-molecule localization microscopy is described in [2].mEos3.2 was simultaneously photoconverted, imaged and photobleached by gradually increasing UV illumination (405 nm; up to 1 mW at the sample) and continuous excitation at 561 nm (approximately 50 mW at the sample).PALM movies of cell plasma membrane were recorded in total internal reflection fluorescence (TIRF) mode using an EMCCD camera:exposure time = 100 msframe size = 512x512 pixelspixel size = 80 nm

 



Chen C, Okayama H. High-efficiency transformation of mammalian cells by plasmid DNA. Molecular and cellular biology. 1987 Aug 1;7(8):2745-52.

Tang Y, Dai L, Zhang X, Li J, Hendriks J, Fan X, Gruteser N, Meisenberg A, Baumann A, Katranidis A, Gensch T. SNSMIL, a real-time single molecule identification and localization algorithm for super-resolution fluorescence microscopy. Scientific reports. 2015 Jun 22;5(1):11073
DOI: 10.5281/zenodo.8349193
title: Dataset from "Channelrhodopsin-2 Oligomerization in Cell Membrane Revealed by Photo-Activated Localization Microscopy" (b1AR-mEos3.2)

description: This dataset contains raw microscopy data from the article "Channelrhodopsin-2 Oligomerization in Cell Membrane Revealed by Photo-Activated Localization Microscopy" (doi.org/10.1002/anie.202307555)

Zip file contains PALM measurements of HEK293 cells expressing ß1AR fused with mEos3.2.Each folder in .zip file contains one PALM measurement (TIFF format) and recording settings (.xml) automatically created by acquiring software. For technical reasons, single measurements are divided into TIFF files of =<4088 frames.

Detailed protocols for sample preparation and data acquisition are described in the article.Some details are listed below.

SAMPLE PREPARATION

cell line: Flp-In™ T-REx™ 293transfection method: modified calcium-phosphate transient transfection [1]fixation method: 4% paraformaldehyde solution in PBS for 30 min at room temperatureimaging buffer: PBS

PALM ACQUISITION

A custom-built setup for single-molecule localization microscopy is described in [2].mEos3.2 was simultaneously photoconverted, imaged and photobleached by gradually increasing UV illumination (405 nm; up to 1 mW at the sample) and continuous excitation at 561 nm (approximately 50 mW at the sample).PALM movies of cell plasma membrane were recorded in total internal reflection fluorescence (TIRF) mode using an EMCCD camera:exposure time = 100 msframe size = 512x512 pixelspixel size = 80 nm

 



Chen C, Okayama H. High-efficiency transformation of mammalian cells by plasmid DNA. Molecular and cellular biology. 1987 Aug 1;7(8):2745-52.

Tang Y, Dai L, Zhang X, Li J, Hendriks J, Fan X, Gruteser N, Meisenberg A, Baumann A, Katranidis A, Gensch T. SNSMIL, a real-time single molecule identification and localization algorithm for super-resolution fluorescence microscopy. Scientific reports. 2015 Jun 22;5(1):11073
DOI: 10.6084/m9.figshare.7386476.v1
title: Additional file 17: of Comprehensive proteome analyses of lysine acetylation in tea leaves by sensing nitrogen nutrition

description: Table S15. The detailed information of proteins involved in 3dN/3hN Interaction network. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.12629128.v1
title: Additional file 2 of Network-inference-based prediction of the COVID-19 epidemic outbreak in the Chinese province Hubei

description: Additional file 2 Table S2 – Data of the COVID-19 epidemic outbreak in Hubei. The time series of the reported number of infections and the population size for every city in Hubei.
DOI: 10.6084/m9.figshare.12629128
title: Additional file 2 of Network-inference-based prediction of the COVID-19 epidemic outbreak in the Chinese province Hubei

description: Additional file 2 Table S2 – Data of the COVID-19 epidemic outbreak in Hubei. The time series of the reported number of infections and the population size for every city in Hubei.
DOI: 10.6084/m9.figshare.21017935
title: Identifying the association rules between adverse events and concomitant medicines in clinical trial data management using random forest

description: Adverse events (AEs) and concomitant medications (CMs) underreporting remains a recurrent issue in clinical trials. This study aimed to build a mapping relationship between the AE and CM using a random forest (RF) model that can be embedded in the current Electronic Data Capture (EDC) system, to enable a reliable detection of underreporting AE or CM. Current data including 524 AEs and 684 CMs for 13,905 individuals, were taken from three cancer clinical trials and six other studies that are non-public. An additional validation dataset was consisted of 448 independent patients with 269 unique AEs and 407 CMs from a cancer clinical trial on Paclitaxel. We found that the machine learning method exhibited in a learning task between AE and CM well for a common AE like hypertension that was caused by a single cause, but it was ineffective when the AE, such as the increased blood alkaline phosphatase, was caused by complex reasons or just an associated symptom of some diseases. This study suggests the potential of automatically detecting the underreported AE and CM in detail, and it will improve further safety and validity inspections from clinical trials. <b>ABBREVIATIONS:</b> AE, adverse event; ATC, anatomical therapeutic chemical; CM, concomitant medication; EDC, electronic data capture; FDA, Food and Drug Administration; GCP, good clinical practice; MedDRA, medical dictionary for regulatory activities; NMPA, National Medical Products Administration; PT, preferred term; RCT, randomized controlled trial; RF, random forests; SDV, source data verification; VIM, variable importance measure
DOI: 10.6084/m9.figshare.7386443.v1
title: Additional file 15: of Comprehensive proteome analyses of lysine acetylation in tea leaves by sensing nitrogen nutrition

description: Table S13. The detailed information of photosynthesis acetylated proteins involved in 3dN/0â N Interaction network. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.7386464
title: Additional file 16: of Comprehensive proteome analyses of lysine acetylation in tea leaves by sensing nitrogen nutrition

description: Table S14. The detailed information of ribosome acetylated proteins involved in 3dN/0â N Interaction network. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.21542133.v1
title: Additional file 1 of Construction of an SNP fingerprinting database and population genetic analysis of 329 cauliflower cultivars

description: Additional file 1.
DOI: 10.6084/m9.figshare.21542238
title: Additional file 9 of Integrated next-generation sequencing and comparative transcriptomic analysis of leaves provides novel insights into the ethylene pathway of Chrysanthemum morifolium in response to a Chinese isolate of chrysanthemum virus B

description: Additional file 9: Table S8. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis of the significant differentially expressed genes (SDEGs) of Chrysanthemum morifolium responding to infection with the Chinese isolate of chrysanthemum virus B (CVB-CN).
DOI: 10.6084/m9.figshare.21542205.v1
title: Additional file 10 of Integrated next-generation sequencing and comparative transcriptomic analysis of leaves provides novel insights into the ethylene pathway of Chrysanthemum morifolium in response to a Chinese isolate of chrysanthemum virus B

description: Additional file 10: Table S9. Significant differentially expressed genes (SDEGs) in leaves of Chrysanthemum morifolium implicated in transcription and transcription regulation during infection with the Chinese isolate of chrysanthemum virus B (CVB-CN).
DOI: 10.6084/m9.figshare.7386296
title: MOESM5 of Evaluation of the prognostic value of paraoxonase 1 in the recurrence and metastasis of hepatocellular carcinoma and establishment of a liver-specific predictive model of survival

description: Additional file 5. GSEA for MSigDB pathways (KEGG, PID, REACTOME)
DOI: 10.6084/m9.figshare.7386296.v1
title: MOESM5 of Evaluation of the prognostic value of paraoxonase 1 in the recurrence and metastasis of hepatocellular carcinoma and establishment of a liver-specific predictive model of survival

description: Additional file 5. GSEA for MSigDB pathways (KEGG, PID, REACTOME)
DOI: 10.6084/m9.figshare.7386314
title: Additional file 8: of Prediction of plant-derived xenomiRs from plant miRNA sequences using random forest and one-dimensional convolutional neural network models

description: Figure S1. Venn diagram showed the 241 potential xenomiRs predicted by both RF and 1D-CNN models. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.7386395
title: Additional file 11: of Comprehensive proteome analyses of lysine acetylation in tea leaves by sensing nitrogen nutrition

description: Table S9. The detailed information of proteins involved in 3hN/0â N Interaction network. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.7386377.v1
title: Additional file 10: of Comprehensive proteome analyses of lysine acetylation in tea leaves by sensing nitrogen nutrition

description: Table S8. Enrichment analysis of lysine-acetylated proteins. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.7386395.v1
title: Additional file 11: of Comprehensive proteome analyses of lysine acetylation in tea leaves by sensing nitrogen nutrition

description: Table S9. The detailed information of proteins involved in 3hN/0â N Interaction network. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.21542211.v1
title: Additional file 12 of Integrated next-generation sequencing and comparative transcriptomic analysis of leaves provides novel insights into the ethylene pathway of Chrysanthemum morifolium in response to a Chinese isolate of chrysanthemum virus B

description: Additional file 12: Table S11. Significant differentially expressed genes (SDEGs) in Chrysanthemum morifolium following infection with the Chinese isolate of chrysanthemum virus B (CVB-CN) implicated in the ethylene pathway established according to the Kyoto Encyclopedia of Genes and Genomes (KEGG) database and previous studies on the model plant species Arabidopsis.
DOI: 10.6084/m9.figshare.21542220.v1
title: Additional file 3 of Integrated next-generation sequencing and comparative transcriptomic analysis of leaves provides novel insights into the ethylene pathway of Chrysanthemum morifolium in response to a Chinese isolate of chrysanthemum virus B

description: Additional file 3: Table S2. Contigs mapped in the viral genome of the Chinese isolate of chrysanthemum virus B (CVB-CN).