cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14177090
title: Additional file 4 of Genome-wide association analysis identified both RNA-seq and DNA variants associated to paratuberculosis in Canadian Holstein cattle ‘in vitro’ experimentally infected macrophages

description: Additional file 4: Supplementary file 1.
DOI: 10.6084/m9.figshare.14177096
title: Additional file 6 of Genome-wide association analysis identified both RNA-seq and DNA variants associated to paratuberculosis in Canadian Holstein cattle ‘in vitro’ experimentally infected macrophages

description: Additional file 6: Supplementary file 3.
DOI: 10.6084/m9.figshare.14177093.v1
title: Additional file 5 of Genome-wide association analysis identified both RNA-seq and DNA variants associated to paratuberculosis in Canadian Holstein cattle ‘in vitro’ experimentally infected macrophages

description: Additional file 5: Supplementary file 2.
DOI: 10.6084/m9.figshare.14177106
title: Additional file 2 of Methylation of rRNA as a host defense against rampant group II intron retrotransposition

description: Additional File 2:. ISS1 insertion mapping. This file contains coordinates and gene information on the ISS1 mutants generated in this study.
DOI: 10.6084/m9.figshare.14177106.v1
title: Additional file 2 of Methylation of rRNA as a host defense against rampant group II intron retrotransposition

description: Additional File 2:. ISS1 insertion mapping. This file contains coordinates and gene information on the ISS1 mutants generated in this study.
DOI: 10.6084/m9.figshare.14177109
title: Additional file 3 of Methylation of rRNA as a host defense against rampant group II intron retrotransposition

description: Additional File 3:. RTP-up mutants list and summary data. This file lists all verified single-insertion RTP-up mutants, with data on their insertion sites, mutant tier ranking, and COG classification.
DOI: 10.6084/m9.figshare.14177109.v1
title: Additional file 3 of Methylation of rRNA as a host defense against rampant group II intron retrotransposition

description: Additional File 3:. RTP-up mutants list and summary data. This file lists all verified single-insertion RTP-up mutants, with data on their insertion sites, mutant tier ranking, and COG classification.
DOI: 10.6084/m9.figshare.14177165.v1
title: Additional file 1 of Development of a novel, sensitive translational immunoassay to detect plasma glial fibrillary acidic protein (GFAP) after murine traumatic brain injury

description: Additional file 1. GFAP assay precision mixed model output. Exported SPSS Statistics output analyzing precision data (“Repeatability and intermediate precision of the assay” section, Fig. 2, Table 5). (XLSM 57 kb)
DOI: 10.6084/m9.figshare.14177165
title: Additional file 1 of Development of a novel, sensitive translational immunoassay to detect plasma glial fibrillary acidic protein (GFAP) after murine traumatic brain injury

description: Additional file 1. GFAP assay precision mixed model output. Exported SPSS Statistics output analyzing precision data (“Repeatability and intermediate precision of the assay” section, Fig. 2, Table 5). (XLSM 57 kb)
DOI: 10.17632/7zdjt8dtk5.1
title: Detrimental effects of urbanization on the diet, health, and signal coloration of an ecologically successful alien bird

description: Custom-made MATLAB program calibrated for the U-type eyes and used to analyse reflectance files generated with a AvaSpec 2048 spectrophotometer and an Avalight-XE light source (Avantes, Netherlands).
DOI: 10.17632/3w2x9jkvg5.3
title: Dataset related to Environmental Sustainability factors used by Higher Education Institutions

description: This research aims to develop a hybrid environmental sustainability assessment model capable of assessing the degree of essentiality of environmental sustainability factors in Higher Education Institutions. The dataset was collected online using Google Forms. The survey items were constructed based on the factors found using the content analysis of 47 scientific articles selected systematically in the SCOPUS and ISI Web of Science databases. The questionnaire was prepared based on Lawshe´s Method, so that a sample of 105 participants evaluated each one of them as indispensable, important, unnecessary or I did not understand. Analysis of the articles resulted in 40 factors of environmental sustainability and the highest frequency for assessing the sustainability of Higher Education Institutions. The result of the study allows identifying items covered in the Literature Review and listed in GRI model that are not present in the evaluated models.
DOI: 10.17632/fm7v43jrbk.3
title: Longitudinal profiling of respiratory and systemic immune response reveals myeloid cell-driven lung inflammation in severe COVID-19. Szabo et al.

description: Supplementary data files from 'Longitudinal profiling of respiratory and systemic immune response reveals myeloid cell-driven lung inflammation in severe COVID-19 by Szabo et al. Accepted for publication in Immunity (Cell Press).
DOI: 10.17632/3ydd4tkm7c.1
title: Number of plant varieties application by Japanese sub-national government from 1978 to 2020

description: 1. This data set shows the number of applications filed with the Ministry of Agriculture, Forestry and Fisheries to obtain breeder's rights for plant varieties developed by 47 sub-national governments in Japan between 1978 and 2020. 2. It also shows the relationship between the number of applications and the number of plants. 3. Finally, the number of applications for the 20 years period from 2000 to 2019 is shown by sub-national governments. The figure uses five-year averages, but the data set shows the number of applications for each year. To create this data set, I used the CSV output of all data items (http://www.hinshu2.maff.go.jp/vips/cmm/apCMM110.aspx?MOSS=1) published by the Ministry of Agriculture, Forestry and Fisheries. However, the data published by MAFF is only provided in Japanese. In the totaling of the data, the variety developed by the legal persons managed by the budget of the sub-national government such as local independent administrative agency and public interest foundation was also counted as the variety developed by the sub-national government, even if it was not explicitly made to be sub-national government.
DOI: 10.17632/jwwyy4xryx.1
title: Mexican public librarians: three interviews and a survey results about its role within the library [Bibliotecarios públicos mexicanos: tres entrevistas y los resultados de una encuesta sobre su papel dentro de la biblioteca]

description: For the development of the Master's thesis entitled: "The empowerment of the librarian as an agent of social change: A Human Development approach". A questionnaire was conducted to 15 public librarians on the perception of their role in the library where they work. The results of this survey are added to this data set. Transcripts of three interviews of approximately 1:50 minutes on the perception of their role in the library are added too. In order to analyze their perceptions to determine their level of empowerment. Por el desarrollo de la tesis de maestría titulada: "El empoderamiento del bibliotecario como agente de cambio social: Un enfoque de Desarrollo Humano". Se realizó un cuestionario a 15 bibliotecarios públicos sobre la percepción de su papel en la biblioteca donde trabajan. Los resultados de esta encuesta se añaden a este conjunto de datos. También se añaden las transcripciones de tres entrevistas de aproximadamente 1:50 minutos sobre la percepción de su papel en la biblioteca. Con el fin de analizar sus percepciones para determinar su nivel de empoderamiento.
DOI: 10.17632/s5c5ztwdvd.1
title: Does heterogeneity define COVID-19 transmission – sero-epidemiological survey data from a Central Indian urban settlement

description: Relaxation of mass quarantine (lockdown) measures has led to an increase in the daily positivity rate of SARS-CoV-2. However, the pattern and dynamics of its spread has been heterogenous across and within the states of India. This sero-epidemiological prevalence survey conducted in the city of Ujjain is one of the earliest such studies conducted to understand the determinants and dynamics of spread of COVID-19 in Ujjain and similar cities of Madhya Pradesh. A total of 4,883 individuals chosen through a stratified multi-stage random sampling method, were approached to capture socio-demographic information and any history of symptoms associated with COVID-19. A sample of venous blood was also collected and assessed for the presence of SARS-CoV-2 specific antibodies using the Electrochemiluminescence Immunoassay (ECLIA) technique. Overall unadjusted sero-prevalence for anti-SARS-CoV-2 antibody was found to be 14.2% (95% CI: 13.2% - 15.2%), and adjusted sero-prevalence was found to be 13.9% (95% CI: 10.4% - 18%). The adjusted sero-prevalence was highest in the age-group between 30 and 45 years (17.1%) and was lowest in children &lt;15 years (9.5%). Sero-positivity was significantly higher in males (p=0.006) and in the 30-45 years age group (p=0.009). Adjusted titre values for anti-SARS-CoV-2 antibody were found to be 10.4 COI (SE = 3.38 COI) for the High Burden tertile; 4.8 (SE = 1.34 COI) for the Intermediate Burden tertile; and 6.1 COI (SE = 2.19 COI) for the Low Burden tertile.
DOI: 10.17632/jxb49k9d4t.2
title: Supplementary Table 1

description: Supplementary Table 1 including medications used within the dataset
DOI: 10.17632/z5vhcktxjx.1
title: Modeling- and remodeling-based bone formation in rats

description: The research data of the manuscript "Activation, Development, and Attenuation of Modeling- and Remodeling-Based Bone Formation in Adult Rats"
DOI: 10.17632/7jccs9bhtb.2
title: microarray data for PPCM

description: miRNA microarray for the sera of Controls and PPCM with PE patients. Transcriptome (mRNA microarray) and pathway analysis for miR-320a mimics responsive genes in HEK293T cells.
DOI: 10.17632/tv3kf72yzd.3
title: PERK signaling for PPCM original dataset

description: Peripartum cardiomyopathy (PPCM) is a life-threatening heart failure in the peripartum period. Multiple signaling pathways, such as Stat3 and Akt signaling, and various hormones, such as prolactin (PRL) are involved with the pathogenesis. Interactions among them remain unraveled. Therefore, this study aimed to evaluate the contribution of PERK for them. In vivo, cardiomyocyte-specific PERK homogenous knockout (CM-KO) mice showed PPCM phenotypes after consecutive deliveries. Downregulation of UPR or JAK/Stat signaling, and upregulation of necroptosis were observed in the hearts of the CM-KO mice. Furthermore, we treated the CM-KO mice with bromocriptine (BCR), reducing the production of PRL. BCR improved postpartum cardiac dysfunction in CM-KO mice, suppressing necroptosis. These results showed that peripartum PERK deletion modulated these interactions.
DOI: 10.17632/rsxmjkhtf9.2
title: COVID-19 in Mexico: Perception and knowledge of the pandemic in the Mexican population through the application of online surveys.

description: This is a descriptive and cross-sectional study to know the perception of the Mexican population during the mandatory quarantine during phase 2 of the COVID-19 pandemic, in the month of April 2020. Raw data is shown that includes: General data , Knowledge of the virus , Current health status , Work status , Economy , Emotional state and Media (relationship of images with emotions perception).
DOI: 10.17632/zv2yv5xbf4.2
title: Supplementary material: Tables and Figures COVID-19 in Mexican Population

description: Supplementary material: Tables of results about Knowledge, attitudes and practices in mexican population through online survey in April 2020, during the phase 2 of pandemic of COVID-19.
DOI: 10.17632/dmkydsxgd3.1
title: MCNNTUNES: Tuning Shower Monte Carlo generators with machine learning

description: The parameters tuning of event generators is a research topic characterized by complex choices: the generator response to parameter variations is difficult to obtain on a theoretical basis, and numerical methods are hardly tractable due to the long computational times required by generators. Event generator tuning has been tackled by parametrization-based techniques, with the most successful one being a polynomial parametrization. In this work, an implementation of tuning procedures based on artificial neural networks is proposed. The implementation was tested with closure testing and experimental measurements from the ATLAS experiment at the Large Hadron Collider.
DOI: 10.17632/ztrbxn9k9d.1
title: SONATA Results at Conferences_2018/31/D/ST8/00792

description: The selected presentations that present results from SONATA project.
DOI: 10.17632/5cb2yrfx7r.1
title: PArallel, Robust, Interface Simulator (PARIS)

description: PARIS (PArallel, Robust, Interface Simulator) is a finite volume code for simulations of immiscible multifluid or multiphase flows. It is based on the “one-fluid” formulation of the Navier–Stokes equations where different fluids are treated as one material with variable properties, and surface tension is added as a singular interface force. The fluid equations are solved on a regular structured staggered grid using an explicit projection method with a first-order or second-order time integration scheme. The interface separating the different fluids is tracked by a Front-Tracking (FT) method, where the interface is represented by connected marker points, or by a Volume-of-Fluid (VOF) method, where the marker function is advected directly on the fixed grid. PARIS is written in Fortran95/2002 and parallelized using MPI and domain decomposition. It is based on several earlier FT or VOF codes such as FTC3D, SURFER or GERRIS. These codes and similar ones, as well as PARIS, have been used to simulate a wide range of multifluid and multiphase flows.
DOI: 10.25442/hku.14140967
title: Supporting data for Positive Relationship Between Cognitive Function and Language Performance Over the Course of Conversation Therapy Targeting Functional Communication in People With Aphasia: An Initial Study

description: The dataset contains the performance of participants with aphasia in a series of linguistic and cognitive tests for five times across a study period of 20 weeks. <br>Consent was sought before data collection.
DOI: 10.25442/hku.14140967.v1
title: Supporting data for Positive Relationship Between Cognitive Function and Language Performance Over the Course of Conversation Therapy Targeting Functional Communication in People With Aphasia: An Initial Study

description: The dataset contains the performance of participants with aphasia in a series of linguistic and cognitive tests for five times across a study period of 20 weeks. <br>Consent was sought before data collection.
DOI: 10.17632/m2jwxshtfz.1
title: HEP-Frame: Improving the efficiency of pipelined data transformation & filtering for scientific analyses

description: Software to analyse very large sets of experimental data often relies on a pipeline of irregular computational tasks with decisions to remove irrelevant data from further processing. A user-centred framework was designed and deployed, HEP-Frame, which aids domain experts to develop applications for scientific data analyses and to monitor and control their efficient execution. The key feature of HEP-Frame is the performance portability of the code across different heterogeneous platforms, due to a novel adaptive multi-layer scheduler, seamlessly integrated into the tool, an approach not available in competing frameworks. The multi-layer scheduler transparently allocates parallel data/tasks across the available heterogeneous resources, dynamically balances threads among data input and computational tasks, adaptively reorders in run-time the parallel execution of the pipeline stages for each data stream, respecting data dependencies, and efficiently manages the execution of library functions in accelerators. Each layer implements a specific scheduling strategy: one balances the execution of the computational stages of the pipeline, distributing the execution of the stages of the same or different dataset elements among the available computing threads; another controls the order of the pipeline stages execution, so that most data is filtered out earlier and later stages execute the computationally heavy tasks; yet another adaptively balances the automatically created threads among data input and the computational tasks, taking into account the requirements of each application. Simulated data analyses from sensors in the ATLAS Experiment at CERN evaluated the scheduler efficiency, on dual multicore Xeon servers with and without accelerators, and on servers with the many-core Intel KNL. Experimental results show significant improved performance of these data analyses due to HEP-Frame features and the codes scaled well on multiple servers. Results also show the improved HEP-Frame scheduler performance over the key competitor, the HEFT list scheduler. The best overall performance improvement over a real fine tuned sequential data analysis was impressive in both homogeneous and heterogeneous multicore servers and in many-core servers: 81x faster in the homogeneous 24+24 core Skylake server, 86x faster in the heterogeneous 12+12 core Ivy Bridge server with the Kepler GPU, and 252x faster in the 64-core KNL server.
DOI: 10.17632/ptcvxwjmmp.1
title: Paying-It-Forward: How Does Social Comparison Impact on Greed Decision-making?

description: This study investigates the effects of social comparison on the greed decision-making. We adopted ERP technology and relevant experimental paradigms and got some interesting conclusion.Behaviorally, there is less greed behaviors in the downward comparison. However, social comparison does not affect paying-it-forward (PIF) greed, which means that individuals tend to treat an uninvolved third person in a greedy way after encountering the greedy treatment of others. There is no interaction effect between social comparison and the way of being treated. On the neural level, the interaction effect indicated that individuals were inclined to keep more cognitive resources by suppressing information processing unfavorable to them, thus to do a greed decision-making.
DOI: 10.17632/36n82m2w3w.1
title: Grid and User-optimized Planning of Charging Processes of an Electric Vehicle Fleet Using a Quantitative Optimization Model: Datasets

description: Title: Grid and User-optimized Planning of Charging Processes of an Electric Vehicle Fleet Using a Quantitative Optimization Model: Datasets Version: 1.0 Date of Release: 05.03.2021 Identifier: doi:10.17632/36n82m2w3w.1 Permalink: http://dx.doi.org/10.17632/36n82m2w3w.1 Associated publication: [In progress] Grid and User-optimized Planning of Charging Processes of an Electric Vehicle Fleet Using a Quantitative Optimization Model Suggested citation: Please reference the associated publication above when using any datasets or materials described in Mendeley Data. Contact information: Fynn Welzel, Institute for Operations Research and Information Systems, Hamburg University of Technology, Hamburg, Germany, fynn.welzel@tuhh.de Dates of data collection: 2017/01 - 2019/12 Geographic location: Berlin and Bremen, Germany. This directory contains the following datasets: - Solar radiation profiles from HTW Berlin, Germany (see reference below) - Building load profiles from Fraunhofer Institute for Manufacturing Technology and Advanced Materials IFAM, Bremen, Germany Detailed description of the data: # Solar radiation profiles in file "radiationData_htw_Berlin_0-0_35-0_0-2.txt": Radiation data in custom format (described in the file itself) to model the generated photovoltaic power. The radiation data on the horizontal plane was obtained from HTW Berlin (reference below) and converted to a south orientation and with a module inclination of 35° with the help of an algorithm from Volker Quaschning (see reference below). We refer to the publication for detailed information on how this data is used to model the photovoltaic plant. The obtained and converted data is stored in this dataset to ensure long-term access. From this dataset, the following days were selected for the cases defined in the publication: ## Clear summer day: 2017-06-02 ## Cloudy summer day: 2017-08-12 ## Clear winter day: 2017-01-17 ## Cloudy winter day: 2017-02-01 # Building load profiles in the following files: ## 2019-01-21_for_winter_days.csv: Contains the scaled building load profile on 2019-01-21, used for both winter days. ## 2019-06-12_for_summer_days.csv: Contains the scaled building load profile on 2019-06-12, used for both summer days. This data is measured, formatted and provided by Fraunhofer Institute for Manufacturing Technology and Advanced Materials IFAM. The power column represents the scaled power in [kW] the building draws from the node in each of the used time intervals. This power is scaled according to the assumed number of employees working in the building as described in the publication. As one day is divided into 96 time intervals with a length of 15 minutes each, these files contain 96 lines of data with the first interval (t=0) beginning in the first line.
DOI: 10.17632/fgd9b48z6k.1
title: black_carbon

description: The BC mass concentration for flights were the averaged by every 10m height interval, and the observation times are before 12 a.m. The unit for BC is μg/m3.
DOI: 10.17632/fwp4djh97x.1
title: Sewage Sludge Treatment Life Cycle Inventory

description: This data set provides detailed numerical data on the Life Cycle Inventory (LCI) analysis for assessing and comparing the environmental impact related to the treatment of sewage sludge (SS) in open windrow facilities for the production of compost and in an anaerobic digester for the production of biogas. The collection of the data is included in eleven tables, in which the machinery and duration for biogas and compost production procedures, as well as comparative data regarding the environmental impact category emissions for both scenarios are shown . Furthermore, electricity consumption and embodied energy for each scenario compared to other studies are given. The system boundary conditions were determined with the use of the Gabi software.
DOI: 10.17632/hcxk298h2h.1
title: Costas A. Anagnostopoulos

description: Strength parameters for mussel shell concretes and specimen size effect