cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1267541.v3
title: New geological and geochronological data of the Placer de Guadalupe uplift, Mexico: a new piece of the Late Triassic–Jurassic Nazas Arc?

description: Basement exposed in the Placer de Guadalupe–Plomosas uplift in northern Mexico provides important clues for the geologic evolution of the region. The stratigraphic units form stacked thrust sheets of psammitic and calcareous formations, interlayered with magmatic rock. The eastern calcareous and quartzite formations exhibit structures associated with ductile deformation, whereas the upper stratigraphic units only contain structures formed via younger brittle deformation. Porphyry interlayered in the upper Plomosas Formation has a U-Pb zircon age of 171 ± 1 Ma. This age is consistent with its stratigraphic position, interbedded quartzarenites with a maximum depositional age of ~168 Ma. Granite flakes within the Horquilla Formation are dated at 209 ± 3 Ma, and the La Viñata quartzite exhibits a maximum age of ~193 Ma. The Upper Plomosas Formation correlates well with the arc-related Middle Jurassic Nazas Formation of northeastern Mexico, constituting the first report of a Jurassic continental margin arc outcrop in the ‘Central Mexican Gap zone’. We document Late Norian to Bajocian ages for the stratigraphic units cropping out in the Placer de Guadalupe area. The Jurassic age cluster indicates that the Nazas Arc magmatism in the region occurred during the Late Triassic and ended in the Middle Jurassic times. Permian ages previously assigned to these rocks and the occurrence of a Permo–Triassic deformation event have to be dismissed.
DOI: 10.6084/m9.figshare.1279394.v232
title: Early ovariectomy reveals the germline encoding of the “natural” mammalian anti-A-reactive IgM reflecting developmental malignancy.

description: The germline encoding of a non-immune immunoglobulin M (IgM) molecule in mammals was experimentally documented for the first time as a result of the specifically timed ovariectomy of C57BL/10 mice. The target of this innate antibody involves a trans-species developmental antigen that signifies malignancy when expressed in any non-developmental tissue. Although ovariectomy and castration result in uncontrolled and/or enhanced humoral and cellular immunity involving increased weights of the spleen and thymus with pronounced B and T cell production, the development of mercaptoethanol-sensitive, complement-binding, non-immune anti-A reactivity in murine plasma was not enhanced after an ovariectomy that was performed in C57BL/10 mice prior to the onset of puberty. This non-immune murine anti-A, which is complementary to the trans-species, syngeneic ovarian GalNAc-glycan-bearing glycolipids and distinct from the cross-reactive adaptive anti-A antibody, was strongly downregulated or did not appear in plasma of animals ovariectomized at the age of 20 days. Thus, contrary to our previous view, this reactivity is unlikely to originate from a somatic, primary immune or autoimmune response. All of the murine tissues expressed the species-specific Forssman<i> </i>reactivity, and further A-like structures were identified in the male and female reproductive and endodermal organs by reaction with innate human anti-A antibody, while the murine anti-A was exclusively inhibited by syngeneic ovarian glycolipids. Moreover, the early ovarian tissue, which represents a last evolutionary and/or developmental location, showed a developmental polymorphism characterized by reactivity to the lectin from <i>Dolichos biflorus</i> and the agglutinin from <i>Helix pomatia </i>indicating the functional involvement of the <i>O</i>-GalNAc-determined mucin-type A-like, Tn and T (Thomsen-Friedenreich) epitopes that signify malignancy when accumulated and expressed in non-developmental tissues.
DOI: 10.6084/m9.figshare.1267558.v16
title: Traction Force Microscopy and Particle Image Velocimetry of migrating Physarum

description: This is the raw image data from simultaneous TFM and PIV experiments performed on migrating Physarum plasmodia
DOI: 10.6084/m9.figshare.1267541.v2
title: New geological and geochronological data of the Placer de Guadalupe uplift, Mexico: a new piece of the Late Triassic–Jurassic Nazas Arc?

description: Basement exposed in the Placer de Guadalupe–Plomosas uplift in northern Mexico provides important clues for the geologic evolution of the region. The stratigraphic units form stacked thrust sheets of psammitic and calcareous formations, interlayered with magmatic rock. The eastern calcareous and quartzite formations exhibit structures associated with ductile deformation, whereas the upper stratigraphic units only contain structures formed via younger brittle deformation. Porphyry interlayered in the upper Plomosas Formation has a U-Pb zircon age of 171 ± 1 Ma. This age is consistent with its stratigraphic position, interbedded quartzarenites with a maximum depositional age of ~168 Ma. Granite flakes within the Horquilla Formation are dated at 209 ± 3 Ma, and the La Viñata quartzite exhibits a maximum age of ~193 Ma. The Upper Plomosas Formation correlates well with the arc-related Middle Jurassic Nazas Formation of northeastern Mexico, constituting the first report of a Jurassic continental margin arc outcrop in the ‘Central Mexican Gap zone’. We document Late Norian to Bajocian ages for the stratigraphic units cropping out in the Placer de Guadalupe area. The Jurassic age cluster indicates that the Nazas Arc magmatism in the region occurred during the Late Triassic and ended in the Middle Jurassic times. Permian ages previously assigned to these rocks and the occurrence of a Permo–Triassic deformation event have to be dismissed.
DOI: 10.6084/m9.figshare.1267539
title: Database - Medicinal Plants: ClinicalTrials.gov | PubMed | ISI Web of Knowledge. Date: Dec 11, 2014.

description: Bibliometric research.
DOI: 10.6084/m9.figshare.1267539.v1
title: Database - Medicinal Plants: ClinicalTrials.gov | PubMed | ISI Web of Knowledge. Date: Dec 11, 2014.

description: Bibliometric research.
DOI: 10.6084/m9.figshare.1267558.v17
title: Traction Force Microscopy and Particle Image Velocimetry of migrating Physarum

description: This is the raw image data from simultaneous TFM and PIV experiments performed on migrating Physarum plasmodia
DOI: 10.6084/m9.figshare.1279394.v233
title: Early ovariectomy reveals the germline encoding of the “natural” mammalian anti-A-reactive IgM reflecting developmental malignancy.

description: The germline encoding of a non-immune immunoglobulin M (IgM) molecule in mammals was experimentally documented for the first time as a result of the specifically timed ovariectomy of C57BL/10 mice. The target of this innate antibody involves a trans-species developmental antigen that signifies malignancy when expressed in any non-developmental tissue. Although ovariectomy and castration result in uncontrolled and/or enhanced humoral and cellular immunity involving increased weights of the spleen and thymus with pronounced B and T cell production, the development of mercaptoethanol-sensitive, complement-binding, non-immune anti-A reactivity in murine plasma was not enhanced after an ovariectomy that was performed in C57BL/10 mice prior to the onset of puberty. This non-immune murine anti-A, which is complementary to the trans-species, syngeneic ovarian GalNAc-glycan-bearing glycolipids and distinct from the cross-reactive adaptive anti-A antibody, was strongly downregulated or did not appear in plasma of animals ovariectomized at the age of 20 days. Thus, contrary to our previous view, this reactivity is unlikely to originate from a somatic, primary immune or autoimmune response. All of the murine tissues expressed the species-specific Forssman<i> </i>reactivity, and further A-like structures were identified in the male and female reproductive and endodermal organs by reaction with innate human anti-A antibody, while the murine anti-A was exclusively inhibited by syngeneic ovarian glycolipids. Moreover, the early ovarian tissue, which represents a last evolutionary and/or developmental location, showed a developmental polymorphism characterized by reactivity to the lectin from <i>Dolichos biflorus</i> and the agglutinin from <i>Helix pomatia </i>indicating the functional involvement of the <i>O</i>-GalNAc-determined mucin-type A-like, Tn and T (Thomsen-Friedenreich) epitopes that signify malignancy when accumulated and expressed in non-developmental tissues.
DOI: 10.6084/m9.figshare.1267447
title: Investigating the association between germ line specification and sequence evolution in vertebrates - supplementary CD-ROM

description: The contents of the CD-ROM published alongside my thesis: INVESTIGATING THE ASSOCIATION BETWEEN GERM LINE SPECIFICATION AND SEQUENCE EVOLUTION IN VERTEBRATES Teri Evans, Nottingham 2014
DOI: 10.6084/m9.figshare.1267447.v2
title: Investigating the association between germ line specification and sequence evolution in vertebrates - supplementary CD-ROM

description: The contents of the CD-ROM published alongside my thesis: INVESTIGATING THE ASSOCIATION BETWEEN GERM LINE SPECIFICATION AND SEQUENCE EVOLUTION IN VERTEBRATES Teri Evans, Nottingham 2014
DOI: 10.6084/m9.figshare.1267447.v1
title: Additional supplementary thesis data

description: The contents of the CD-ROM published alongside my thesis: INVESTIGATING THE ASSOCIATION BETWEEN GERM LINE SPECIFICATION AND SEQUENCE EVOLUTION IN VERTEBRATES Nottingham 2014
DOI: 10.6084/m9.figshare.1279394.v234
title: Early ovariectomy reveals the germline encoding of the “natural” mammalian anti-A-reactive IgM reflecting developmental malignancy.

description: The germline encoding of a non-immune immunoglobulin M (IgM) molecule in mammals was experimentally documented for the first time as a result of the specifically timed ovariectomy of C57BL/10 mice. The target of this innate antibody involves a trans-species developmental antigen that signifies malignancy when expressed in any non-developmental tissue. Although ovariectomy and castration result in uncontrolled and/or enhanced humoral and cellular immunity involving increased weights of the spleen and thymus with pronounced B and T cell production, the development of mercaptoethanol-sensitive, complement-binding, non-immune anti-A reactivity in murine plasma was not enhanced after an ovariectomy that was performed in C57BL/10 mice prior to the onset of puberty. This non-immune murine anti-A, which is complementary to the trans-species, syngeneic ovarian GalNAc-glycan-bearing glycolipids and distinct from the cross-reactive adaptive anti-A antibody, was strongly downregulated or did not appear in plasma of animals ovariectomized at the age of 20 days. Thus, contrary to our previous view, this reactivity is unlikely to originate from a somatic, primary immune or autoimmune response. All of the murine tissues expressed the species-specific Forssman<i> </i>reactivity, and further A-like structures were identified in the male and female reproductive and endodermal organs by reaction with innate human anti-A antibody, while the murine anti-A was exclusively inhibited by syngeneic ovarian glycolipids. Moreover, the early ovarian tissue, which represents a last evolutionary and/or developmental location, showed a developmental polymorphism characterized by reactivity to the lectin from <i>Dolichos biflorus</i> and the agglutinin from <i>Helix pomatia </i>indicating the functional involvement of the <i>O</i>-GalNAc-determined mucin-type A-like, Tn and T (Thomsen-Friedenreich) epitopes that signify malignancy when accumulated and expressed in non-developmental tissues.
DOI: 10.6084/m9.figshare.1267402
title: AlignFS: A tool for identifying protein-coding sequence and correcting frame-shifts - tested sequences

description: The EST, cDNA and randomly generated sequences tested within the AlignFS manuscript.
DOI: 10.6084/m9.figshare.1279394.v235
title: Early ovariectomy reveals the germline encoding of the “natural” mammalian anti-A-reactive IgM reflecting developmental malignancy.

description: The germline encoding of a non-immune immunoglobulin M (IgM) molecule in mammals was experimentally documented for the first time as a result of the specifically timed ovariectomy of C57BL/10 mice. The target of this innate antibody involves a trans-species developmental antigen that signifies malignancy when expressed in any non-developmental tissue. Although ovariectomy and castration result in uncontrolled and/or enhanced humoral and cellular immunity involving increased weights of the spleen and thymus with pronounced B and T cell production, the development of mercaptoethanol-sensitive, complement-binding, non-immune anti-A reactivity in murine plasma was not enhanced after an ovariectomy that was performed in C57BL/10 mice prior to the onset of puberty. This non-immune murine anti-A, which is complementary to the trans-species, syngeneic ovarian GalNAc-glycan-bearing glycolipids and distinct from the cross-reactive adaptive anti-A antibody, was strongly downregulated or did not appear in plasma of animals ovariectomized at the age of 20 days. Thus, contrary to our previous view, this reactivity is unlikely to originate from a somatic, primary immune or autoimmune response. All of the murine tissues expressed the species-specific Forssman<i> </i>reactivity, and further A-like structures were identified in the male and female reproductive and endodermal organs by reaction with innate human anti-A antibody, while the murine anti-A was exclusively inhibited by syngeneic ovarian glycolipids. Moreover, the early ovarian tissue, which represents a last evolutionary and/or developmental location, showed a developmental polymorphism characterized by reactivity to the lectin from <i>Dolichos biflorus</i> and the agglutinin from <i>Helix pomatia </i>indicating the functional involvement of the <i>O</i>-GalNAc-determined mucin-type A-like, Tn and T (Thomsen-Friedenreich) epitopes that signify malignancy when accumulated and expressed in non-developmental tissues.
DOI: 10.6084/m9.figshare.1267367
title: Feedback Valence Affects Auditory Perceptual Learning Independently of Feedback Probability

description: SPSS spreadsheet containing all the data for pre- and post-test for participants in the groups described in the paper, including filters for exclusions. Variables are defined and values are given in the variable view. Slopes are also given based on psychometric function fits.
DOI: 10.6084/m9.figshare.1267368
title: Glacial geomorphology of the Altai and Western Sayan Mountains, Central Asia

description: In this article, we present a map of the glacial geomorphology of the Altai and Western Sayan Mountains, covering an area of almost 600,000 km<sup>2</sup>. Although numerous studies provide evidence for restricted Pleistocene glaciations in this area, others have hypothesized the past existence of an extensive ice sheet. To provide a framework for accurate glacial reconstructions of the Altai and Western Sayan Mountains, we present a map at a scale of 1:1,000,000 based on a mapping from 30 m resolution ASTER DEM and 15 m/30 m resolution Landsat ETM+ satellite imagery. Four landform classes have been mapped: marginal moraines, glacial lineations, hummocky terrain, and glacial valleys. Our mapping reveals an abundance of glacial erosional and depositional landforms. The distribution of these glacial landforms indicates that the Altai and Western Sayan Mountains have experienced predominantly alpine-style glaciations, with some small ice caps centred on the higher mountain peaks. Large marginal moraine complexes mark glacial advances in intermontane basins. By tracing the outer limits of present-day glaciers, glacial valleys, and moraines, we estimate that the past glacier coverage have totalled to 65,000 km<sup>2</sup> (10.9% of the mapped area), whereas present-day glacier coverage totals only 1300 km<sup>2</sup> (0.2% of the mapped area). This demonstrates the usefulness of remote sensing techniques for mapping the glacial geomorphology in remote mountain areas and for quantifying the past glacier dimensions. The glacial geomorphological map presented here will be used for further detailed reconstructions of the paleoglaciology and paleoclimate of the region.
DOI: 10.6084/m9.figshare.1267367.v1
title: Feedback Valence Affects Auditory Perceptual Learning Independently of Feedback Probability

description: SPSS spreadsheet containing all the data for pre- and post-test for participants in the groups described in the paper, including filters for exclusions. Variables are defined and values are given in the variable view. Slopes are also given based on psychometric function fits.
DOI: 10.6084/m9.figshare.1267402.v2
title: AlignFS: A tool for identifying protein-coding sequence and correcting frame-shifts - tested sequences

description: The EST, cDNA and randomly generated sequences tested within the AlignFS manuscript.
DOI: 10.6084/m9.figshare.1279394.v236
title: Early ovariectomy reveals the germline encoding of the “natural” mammalian anti-A-reactive IgM reflecting developmental malignancy.

description: The germline encoding of a non-immune immunoglobulin M (IgM) molecule in mammals was experimentally documented for the first time as a result of the specifically timed ovariectomy of C57BL/10 mice. The target of this innate antibody involves a trans-species developmental antigen that signifies malignancy when expressed in any non-developmental tissue. Although ovariectomy and castration result in uncontrolled and/or enhanced humoral and cellular immunity involving increased weights of the spleen and thymus with pronounced B and T cell production, the development of mercaptoethanol-sensitive, complement-binding, non-immune anti-A reactivity in murine plasma was not enhanced after an ovariectomy that was performed in C57BL/10 mice prior to the onset of puberty. This non-immune murine anti-A, which is complementary to the trans-species, syngeneic ovarian GalNAc-glycan-bearing glycolipids and distinct from the cross-reactive adaptive anti-A antibody, was strongly downregulated or did not appear in plasma of animals ovariectomized at the age of 20 days. Thus, contrary to our previous view, this reactivity is unlikely to originate from a somatic, primary immune or autoimmune response. All of the murine tissues expressed the species-specific Forssman<i> </i>reactivity, and further A-like structures were identified in the male and female reproductive and endodermal organs by reaction with innate human anti-A antibody, while the murine anti-A was exclusively inhibited by syngeneic ovarian glycolipids. Moreover, the early ovarian tissue, which represents a last evolutionary and/or developmental location, showed a developmental polymorphism characterized by reactivity to the lectin from <i>Dolichos biflorus</i> and the agglutinin from <i>Helix pomatia </i>indicating the functional involvement of the <i>O</i>-GalNAc-determined mucin-type A-like, Tn and T (Thomsen-Friedenreich) epitopes that signify malignancy when accumulated and expressed in non-developmental tissues.
DOI: 10.6084/m9.figshare.1267402.v1
title: AlignFS tested sequences

description: The EST, cDNA and randomly generated sequences tested within the AlignFS manuscript.
DOI: 10.6084/m9.figshare.1279394.v237
title: Early ovariectomy reveals the germline encoding of the “natural” mammalian anti-A-reactive IgM reflecting developmental malignancy.

description: The germline encoding of a non-immune immunoglobulin M (IgM) molecule in mammals was experimentally documented for the first time as a result of the specifically timed ovariectomy of C57BL/10 mice. The target of this innate antibody involves a trans-species developmental antigen that signifies malignancy when expressed in any non-developmental tissue. Although ovariectomy and castration result in uncontrolled and/or enhanced humoral and cellular immunity involving increased weights of the spleen and thymus with pronounced B and T cell production, the development of mercaptoethanol-sensitive, complement-binding, non-immune anti-A reactivity in murine plasma was not enhanced after an ovariectomy that was performed in C57BL/10 mice prior to the onset of puberty. This non-immune murine anti-A, which is complementary to the trans-species, syngeneic ovarian GalNAc-glycan-bearing glycolipids and distinct from the cross-reactive adaptive anti-A antibody, was strongly downregulated or did not appear in plasma of animals ovariectomized at the age of 20 days. Thus, contrary to our previous view, this reactivity is unlikely to originate from a somatic, primary immune or autoimmune response. All of the murine tissues expressed the species-specific Forssman<i> </i>reactivity, and further A-like structures were identified in the male and female reproductive and endodermal organs by reaction with innate human anti-A antibody, while the murine anti-A was exclusively inhibited by syngeneic ovarian glycolipids. Moreover, the early ovarian tissue, which represents a last evolutionary and/or developmental location, showed a developmental polymorphism characterized by reactivity to the lectin from <i>Dolichos biflorus</i> and the agglutinin from <i>Helix pomatia </i>indicating the functional involvement of the <i>O</i>-GalNAc-determined mucin-type A-like, Tn and T (Thomsen-Friedenreich) epitopes that signify malignancy when accumulated and expressed in non-developmental tissues.
DOI: 10.6084/m9.figshare.1279394.v238
title: Early ovariectomy reveals the germline encoding of the “natural” mammalian anti-A-reactive IgM reflecting developmental malignancy.

description: The germline encoding of a non-immune immunoglobulin M (IgM) molecule in mammals was experimentally documented for the first time as a result of the specifically timed ovariectomy of C57BL/10 mice. The target of this innate antibody involves a trans-species developmental antigen that signifies malignancy when expressed in any non-developmental tissue. Although ovariectomy and castration result in uncontrolled and/or enhanced humoral and cellular immunity involving increased weights of the spleen and thymus with pronounced B and T cell production, the development of mercaptoethanol-sensitive, complement-binding, non-immune anti-A reactivity in murine plasma was not enhanced after an ovariectomy that was performed in C57BL/10 mice prior to the onset of puberty. This non-immune murine anti-A, which is complementary to the trans-species, syngeneic ovarian GalNAc-glycan-bearing glycolipids and distinct from the cross-reactive adaptive anti-A antibody, was strongly downregulated or did not appear in plasma of animals ovariectomized at the age of 20 days. Thus, contrary to our previous view, this reactivity is unlikely to originate from a somatic, primary immune or autoimmune response. All of the murine tissues expressed the species-specific Forssman<i> </i>reactivity, and further A-like structures were identified in the male and female reproductive and endodermal organs by reaction with innate human anti-A antibody, while the murine anti-A was exclusively inhibited by syngeneic ovarian glycolipids. Moreover, the early ovarian tissue, which represents a last evolutionary and/or developmental location, showed a developmental polymorphism characterized by reactivity to the lectin from <i>Dolichos biflorus</i> and the agglutinin from <i>Helix pomatia </i>indicating the functional involvement of the <i>O</i>-GalNAc-determined mucin-type A-like, Tn and T (Thomsen-Friedenreich) epitopes that signify malignancy when accumulated and expressed in non-developmental tissues.