cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/67b55dncm7
title: Systemic and mucosal concentrations of nine cytokines among individuals with Neisseria gonorrhoeae infection in Nairobi, Kenya

description: We conducted a cross-sectional comparative study of consecutive adults, 18 to 49 years, seeking treatment for sexually transmitted infections at Casino Special Treatment Centre (STC) Health Centre in Nairobi, Kenya. Patients were included if they were between 18 and 49 years and provided written informed consent to participate in the study. 
An interviewer-administered questionnaire was used to collect the sociodemographic characteristics and the sexual history. 
Vaginal samples were collected after insertion of a speculum. For detection of Neisseria gonorrhoeae infection, a dacron swab was placed approximately 2cm into the os and rotated three times, removed and placed into an empty tube and immediately placed on ice. Cervicovaginal lavage (CVL) was collected for mucosal cytokines. Briefly, the cervix and the lateral vaginal walls were flushed with 10 ml normal saline at room temperature. The fluid was allowed to pool into the posterior fornix and aspirated into the same syringe. This procedure was repeated 3-5 times with the same fluid. The fluid was then collected and placed in a 15ml falcon tube and immediately placed on ice to await transportation, up to 4 hours. 
Urethral samples were collected by gently inserting  dacron swabs 2-4 cm inside the urethra and rotating three times. They were then carefully removed and placed (i) into an empty tube for detection of  Neisseria gonorrhoeae infection and (ii) in a tube containing 1.5ml phosphate buffered saline (PBS) for mucosal cytokine analysis. The tubes were immediately placed on ice to await transportation.
For systemic cytokine analysis, 10mls of venous blood was collected, from all participants, into EDTA treated tubes and then immediately placed on ice to await transportation. 
All participants were tested for HIV using Determine HIV Rapid Test (Abbott Diagnostics) with confirmatory testing being done with the First Response™ (Premier Medical Corporation Private Ltd., Gujarat, India), according to Kenya’s Ministry of Heath guidelines.  Those who tested negative with the first test were considered HIV negative while those who tested positive with the confirmatory test were considered HIV positive and were either enrolled in the Casino H/C HIV comprehensive care clinic (CCC) or referred to a health facility of their choice for follow-up.
Screening for Neisseria gonorrhoeae, Chlamydia trachomatis, Trichomonas vaginalis and Mycoplasma genitalium was done using Multiplex PCR (Sacace Biotechnologies, Como, Italy) according to the manufacturer’s instructions.
The systemic and mucosal levels of 9 cytokines (IL-1, IL-2, IL-4, IL-6, IL-10, IL-12p70, IL-17A, TNF- and IFN-) were measured using the Invitrogen™ High Sensitivity 9-Plex Human ProcartaPlex™ Panel (Thermo Fisher Scientific Inc.)
DOI: 10.17632/g65rf7psn5
title: Itch-Free State in Patients With Atopic Dermatitis Treated With Ruxolitinib Cream: Pooled Analysis From Two Randomized Phase 3 Studies

description: Supplementary Appendix for an article published in the Journal of the American Academy of Dermatology
DOI: 10.17632/h988nzhdcn
title: Real-World Effects of Biologics on Renal Function in Psoriatic Patients: A Retrospective Study

description: Supplemental tables and figures
DOI: 10.17632/k3bs3539d5
title: Data for: Archean block rotation in Western Karelia: resolving dyke swarm patterns in metacraton Karelia-Kola for a refined paleogeographic reconstruction of supercraton Superia

description: Coordinates, geochemistry and geochronology of samples discussed in this paper.
DOI: 10.17632/nhcfpz4p52
title: Supporting Information for [Penetrative strain and partitioning of convergence-related shallow crustal shortening, across scales, in the Lesser- and Sub- Himalayan thrust sheets during orogeny: Insights from the eastern Himalaya, Sikkim]

description: Two-dimensional and three-dimensional penetrative strain data.
DOI: 10.17632/nx7yyvwt3g
title: Psychological Pain among Elderely during Corona Pandemic in Jerusalem

description: The aim of this study was to identify the psychological pain among Jerusalem’s elderly over the age of 65. The sample of the study consisted of 80 elderly people. To achieve the study’s goals, the descriptive approach and psychological pain scale were used. The findings revealed a moderate level of psychological pain among Jerusalem’s elderly. Furthermore, there were statistically significant differences due to academic qualification in favor of university and higher degree. The findings also revealed differences attributable to the gender variable in favor of males, whereas there were no statistically significant differences due to the number of children variable. This means that the pandemic caused additional psychological pain in the lives of the elderly.
DOI: 10.17632/tnxt77tf9g
title: Data for: SPiQE: an automated analytical tool for detecting and characterising fasciculations in amyotrophic lateral sclerosis

description: Four files: 1. Mean noise bands and optimal amplitude inclusion thresholds for 599 one-minute recordings. 2. Sensitivity, specificity and classification accuracy scores for 80 one-minute recordings across multiple thresholds for each model (1 and 2). 3. Sensitivity, specificity and classification accuracy scores for 80 one-minute recordings for different thresholds of amplitude exclusion threshold 4. Comparison of manual and automated fasciculation counts using optimal model.
DOI: 10.17632/v5j4dmsy3y
title: Drilling Campaign Optimization using Sequential Decisions and Analytics

description: Probabilistic datasets used in the paper: Drilling Campaign Optimization using Sequential Decisions and Analytics Application 1 uses "dataset_8_wells_predefined.csv" to build the joint probability distribution Application 2 uses "dataset_3x4_lattice.csv" to build the joint probability distribution
DOI: 10.17632/wsys22rgmb
title: LINF_280020500

description: AAA+ ATPase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/x4snnx75r9
title: LINF_050008600

description: RNA helicase | DBP8; Leishmania infantum
DOI: 10.17632/xng6srxhn4
title: A Review: Prediction for cube in OLAP- Based Data Mining Techniques

description: Data mining and OLAP are very fast choice help apparatuses. OLAP as well as data mining mechanism, OLAP mining procedures has coordinated OLAP as well as data mining abilities straightforwardly within dataset server. OLAP devices give diverse summed up viewpoints of the data. Data mining procedures can find already obscure examples of data. An UML model is utilized for Decision earnestly solid association which joins the traits of alongside OLAP just as information mining. It gives an information climate that can't be developed with the assistance of OLAP just as Data mining alone. The classes can be identified with each other in number of ways, similar to they can be associated, poverty stricken, explicit or bundled. Different other information mining functionalities, for example, affiliation, depiction, and want and packaging can be intertwined with OLAP undertakings to update normal mining of learning at various times of thought.
DOI: 10.17632/z2vtsm6vt6
title: Electrophoretogram for PCR products

description: The original data of agarose gel eletrophoresis for PCR products.
DOI: 10.17632/3j6zgdymd8
title: The Data (The Journal of Youth Studies)

description: The Data concerning the study.
DOI: 10.17632/f78s4xcbyg
title: Properties of Engine Mounting Rubber as Passive Control Device

description: Rubber Characteristic.
Ultimate tensile strength test ; Axial elongation test ; Hardness test (Shore A) ; Density test
DOI: 10.17632/g6nfy3hnzf
title: Lyso-PAF, a biologically inactive phospholipid, contributes to RAF1 activation. Gao et al

description: unprocessed imaging data of "Lyso-PAF, a biologically inactive phospholipid, contributes to RAF1 activation". Gao et al on Mol Cell.
DOI: 10.17632/gs79pjrcx6
title: Supplementary data set 1 - GCMS and secondary metabolite screening of pineapple peel n-hexane extract

description: This file contains supplementary data, including GC-MS results and secondary metabolite screening results.
DOI: 10.17632/h2b78y42d7
title: Anderson_LOH_v2

description: Simultaneous brain cell type and lineage determined by scRNA-seq reveals stereotyped cortical development

Mutations are acquired frequently, such that each cell’s genome inscribes its history of cell divisions. Common genomic alterations involve loss of heterozygosity (LOH). LOH accumulates throughout the genome, offering large encoding capacity for inferring cell lineage. Using only single cell RNA sequencing (scRNA-seq) of mouse brain cells, we found that LOH events spanning multiple genes are revealed as tracts of monoallelically expressed, constitutionally heterozygous single nucleotide variants (SNVs). We simultaneously inferred cell lineage, marked developmental time points based on X-chromosome inactivation and the total number of LOH events, while identifying cell types from gene expression patterns. Our results are consistent with progenitor cells giving rise to multiple cortical cell types through stereotyped expansion and distinct waves of neurogenesis. This type of retrospective analysis could be incorporated into scRNA-seq pipelines and, compared to experimental approaches for determining lineage in model organisms, is applicable where genetic engineering is prohibited, such as humans.
DOI: 10.17632/h9cwnktyk2
title: SUPPLEMENTARY MATERIAL 

description: Search formula and protocol for calves’ management of: "WELFARE IMPLICATIONS ON MANAGEMENT STRATEGIES FOR REARING HOLSTEIN CALVES: A SYSTEMATIC REVIEW. "
DOI: 10.17632/j24phb85v7
title: Data for: Design of a CaAlSiN3:Eu/Glass Composite Film: Facile Synthesis, High Saturation-Threshold and Application in High-power Laser Lighting

description: Data for: Design of a CaAlSiN3:Eu/Glass Composite Film: Facile Synthesis, High Saturation-Threshold and Application in High-power Laser Lighting
DOI: 10.17632/k6z33rt8kv
title: Dataset Uniajc

description: Set of thermographic images made to the photovoltaic panel installed at the Antonio José Camacho University in Cali, Colombia. To carry out image processing tests for the degree project "Thermographic analysis of photovoltaic panels by digitizing images".
DOI: 10.17632/mpt3cwd8rh
title: Data to accompany Registered Report Stage 2 Manuscript: Inceptor as a regulator of brain insulin sensitivity

description: Data to accompany Scientific Reports Registered Report Stage 2 Manuscript: Inceptor as a regulator of brain insulin sensitivity
DOI: 10.17632/wwjv6xpzx6
title: Data Figure 3_BLI_Monoclonal antibodies binding data for SARS-CoV-2 proteins

description: Processed data for Figure 3. Data are in excel format which includes data points and fitting points for different antibodies used.  The binding responses were analyzed by subtracting data from reference, and data were globally fitted with a 1:1 binding model using ForteBio’s Data Analysis software 9.0
DOI: 10.17632/xyztk3zjkv
title: LDHU3_08.0530

description: hypothetical protein - conserved
Leishmania donovani (HU3 strain)
DOI: 10.17632/97mb4kbk4k
title: LINF_360005900

description: Exportin 4-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/bzppvvjmsb
title: Data for: The Results of Hearing Screening in Refugee School Children Living in Şanliurfa /Turkey and the Related Risk Factors

description: The data received from the health ministry
DOI: 10.17632/csvv7xgbr9
title: Supplementary Table - The oral cavity cannot be forgotten in the COVID-19 era: is there a connection between dermatological and oral manifestations?

description: A systematic review was performed on MEDLINE/PubMed using the terms “Oral manifestation OR oral lesion OR oral OR oral cavity OR mouth OR oral mucosa OR oral mucosal OR buccal mucosa OR buccal mucosal OR floor of the mouth OR lip OR lips OR tongue OR alveolar process OR alveolar ridge OR gingiva OR palate OR hard palate OR soft palate OR jaw OR jaws OR mandible OR maxilla AND coronavirus disease OR COVID-19 OR SARS-CoV-2”. Retrospective studies, case series, case reports, or letters on oral manifestations associated with COVID-19 were included on the selection. Data of country, sex, age, comorbidities, clinical characteristic, diagnosis technique, systemic and local treatment, oral manifestation onset, anatomical location, histopathology, oral clinical characteristic were retrieved from the papers. Data of each patient reported on the papers were described separately.
DOI: 10.17632/dpxb4x523x
title: LINF_340039400

description: Alpha-keto-acid decarboxylase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/g3vtswd6m9
title: Raw Data

description: Improving the Antioxidation and Antibacterial Activities of the Pectin by Acylating with p-Coumaric and Caffeic Acids through Lipase-Catalysed Transesterification in Water/Organic Two-Phase System
DOI: 10.17632/nzkckrc2bf
title: Small intestine as a glucose reservoir contributes to glucose homeostasis

description: The small intestine acts as a glucose reservoir to harness glucose homeostasis, which dysfunction is associated with type 2 diabetes.
DOI: 10.17632/3fh5mzytkj
title: Not just adapting: The impact of climate change on residents’ green lifestyles

description: Data and code for paper "Not just adapting: The impact of climate change on residents’ green lifestyles".
DOI: 10.17632/6htzhvp2nk
title: There is room for everyone: Invasion credit cannot be inferred from the Species-Area Relationship in fragmented forests

description: Data matrix of 355 patches of northern France. Patches are forest fragments surrounded by different landscape matrix (i.e. with different degree of human disturbance and management). The dataset is composed by species diversity related to patches areas.
DOI: 10.17632/6tzrxp7cry
title: The effect of sitting Baduanjin in patients with ST-segment elevation acute myocardial infarction after percutaneous coronary intervention: A randomized controlled trial

description: Background: Early cardiac rehabilitation plays a crucial role in the recovery of patients following percutaneous coronary intervention. The effect of seated Baduanjin exercises on cardiac function and psychological well-being in patients with acute myocardial infarction remains to be explored.
Objective: We aimed to investigate the effects of seated Baduanjin exercises on patients with ST-segment elevation acute myocardial infarction following percutaneous coronary intervention. 
Design: The study was designed as a single-center, prospective randomized controlled trial.
Participants: A total of 159 patients with stable ST-segment elevation myocardial infarction who had undergone percutaneous coronary intervention were included and analyzed (79 and 80 in the intervention and control groups, respectively).
Methods: Patients in the intervention group received daily seated Baduanjin training in addition to seven-step rehabilitation exercises, whereas those in the control group received seven-step rehabilitation training twice daily. Demographic information, medical history, diagnosis, treatment, as well as anxiety and depression levels before admission were collected. Differences in heart rate variability indicators, exercise capacity, and anxiety and depression status between the two groups during hospitalization were analyzed. 
Results: Following the intervention, the intervention group exhibited lower rates of abnormalities in the following heart rate indicators than the control group: standard deviation of sinus heart beat RR intervals (26.6% vs. 57.5%, P < 0.001), root mean square of the difference between adjacent RR intervals (29.1% vs. 45.0%, P = 0.038), low frequency (24.1% vs. 48.7%, P = 0.001), and high frequency (21.5% vs. 36.2%, P = 0.041); these differences were statistically significant. Additionally, following the intervention, the median scores of GAD-7 and PHQ-9 in both groups were lower than those at admission, with the intervention group exhibiting lower scores than the control group (Z = −3.860, P < 0.001; Z = −4.002, P < 0.001). The six-minute walking distance after the intervention was greater in the intervention group than in the control group (387.53 ± 38.41 vs. 371.39 ± 42.92, t = 2.498, P = 0.014).
Conclusions: In China, seated Baduanjin training has shown the potential to enhance heart rate variability, cardiac function, and psychological well-being in patients with ST-segment elevation myocardial infarction after percutaneous coronary intervention. It also appears to improve exercise capacity before discharge.
DOI: 10.17632/7847g3nj6n
title: GigaAssay – an adaptable high-throughput saturation mutagenesis assay for Tat-driven transcription

description: High throughput assay systems have had a disproportionally large impact on understanding on uncovering the mechanisms of how basic cells functions. However, high throughput assays that directly assess molecular functions are limited. To address this challenge, Herein we engineered, developed, and tested the GigaAssay, a modular high throughput molecular function assay system. In this implementation, we measured how the Tat transcription factor binds HIV the long terminal repeat and recruits host factors to drives expression of a GFP reporter in an engineered reporter cell line. In a one pot assay system, each cell was infected with one virus from a library encoding 1,000s of Tat proteins, each cDNA molecule with one or two unique missense mutations and a unique molecular identifier. Infected cells are flow sorted based on their GFP fluorescence readout. The ratio of signal from each bin is used the calculate the transcriptional activity of each unique Tat molecule is compared to wild type Tat. This GigaAssay one pot assay system was adapted to study how variants impact HIV Tat-driven transactivation of a green fluorescent protein reporter. We assayed cells with individually randomly barcoded cDNAs for all 1,615 Tat single and 3,429 double amino acid substitutions with no single mutant dropout. Each mutant was assayed with more than 100 separately unique molecular identifier barcoded cDNA molecules for each mutant. The results were verified to have high accuracy with five independent assay performance assessments with benchmark data, individually tested clones, and replicate comparisons all indicate exceptional reproducibility, accuracy, and robustness. The resulting analyses yields new insights into the value of tracking single molecules, structure, function, tolerance, and intragenic epistasis of Tat driven transcription in human cells.
DOI: 10.17632/89f6x2fnks
title: In vivo detection of penetrating arteriole alterations in cerebral white matter in patients with diabetes with 7T MRI

description: Data for the study exploring the feasibility of detecting penetrating arteriole alterations in cerebral white matter in patients with diabetes with 7T MRI. 
For technical issues, Data in v1 is not complete, so please use the updated version.  
The study has been published in:  X. Zong el al., Magnetic Resonance Imaging 100(2023)84–92; doi: 10.1016/j.mri.2023.03.015
DOI: 10.17632/8yyfcm777k
title: Affect after team and individual exercise form

description: Research on 120 exercisers involved in team (60) and individual (60) exercises. We measured affect before and after an equal bout of exercise session. While apart exhaustion, positive affective states increased after individual exercise, they decreased after team exercises. These results indicate that the different attentional/mental processes during the exercise session determine the affect experienced after exercise. If one aims to feel better after exercise, individual forms of workout may be more beneficial than team exercises.
DOI: 10.17632/dvvp4f25y6
title: PHB depletion leads to a major remodelling of the lipidome of wild-type and daf-2(e1370) mutant animals at young adult stage.

description: The analysis of the impact that PHB has in the C. elegans lipidome, specifically in the content of individual lipid species, under two different conditions that result in opposing longevity phenotypes, namely wild type and insulin signalling deficient animals. Our results show that PHB depletion differentially perturbs triacylglycerol and phospholipid pools in short- versus long-lived animals.
DOI: 10.17632/gz825s45df
title: LINF_150021100

description: actin-like protein Leishmania infantum (strain JPCM5)
DOI: 10.17632/jz2ry8br6b
title: Phenotype and mutation analysis of children with short stature

description: In the manuscript entitled “Phenotype and mutation analysis of children with short stature” for consideration as an original article in BMC Medical Genomics. The data was generated in our study.
DOI: 10.17632/p6sf6wtdvy
title: 230Th-normalised 232Th fluxes in sediment cores from the tropical Atlantic

description: In this dataset we have compiled 230Th-normalised 232Th flux data from previously published studies of tropical Atlantic sediment cores. The dataset covers the time period from the late Holocene to the last glacial maximum (~0-25 thousand years ago). The flux data are derived from measurements of 238U, 230Th and 232Th concentrations in sediment cores, mostly derived from ICPMS, with some alpha spectrometry. These data are used to infer past patterns and magnitudes of terrigenous inputs to the tropical Atlantic and how this relates to climate changes and processes.
DOI: 10.17632/vmkbx494wx
title: Supplementary material Carparelli, Jones, Oyebode, & Riley2022

description: Supplementary material for a meta-analysis described in a paper entitled  "The Effectiveness of Educational Interventions in Promoting Person-Centred Care in Dementia Services: A Systematic Review and Supplementary Meta-analysis"
DOI: 10.17632/vtz4vt9z5w
title: Reduced risk-taking behavior during frontal oscillatory theta band neurostimulation

description: Behavioral and EEG datasets used in our study "Reduced risk-taking behavior during frontal oscillatory theta band neurostimulation".
DOI: 10.17632/w3bzv8fjt9
title: Data for: The effect of sodium carbonate on reducing the interfacial tension of petroleum sulfonate

description: The spectral data were measured by the Analysis Center of Beijing College of Chemical Technology, China University of Petroleum.
DOI: 10.17632/5v37wxxd2d
title: nitrogen dioxide concentrations in Tandil city

description: Tables with all the absorbance values (given by the spectrophotometer), C concentration (obtained with the calibration curve), exposure time and atmospheric concentration of NO2 corresponding to sampling period.
DOI: 10.17632/6dkksv2c9m
title: Predicting Endocrine Disruption and Blood-Brain Barrier Permeability using the EVANS QSPR Methodology

description: This work presents the development and application of a Quantitative Structure Property Relationship (QSPR) methodology entitled ‘EigenValue ANalysiS (EVANS)’. The EVANS methodology combines information extracted from 3D molecular structures with 2D physicochemical properties to generate eigenvalues, which are then used as descriptor variables in QSPR analyses. Having previously benchmarked the methodology on pharmacodynamic and pharmacokinetic data, we present the EVANS formalism in brief and deploy it on high-quality datasets for prediction of two pharmacological endpoints: (i) estrogen receptor (ER) mediated endocrine disruption, and (ii) BBB permeability. The datasets were processed through the methodology and the generated eigenvalue descriptors were used in conjunction with machine learning algorithms to build predictive QSPR models. Our results demonstrate that the EVANS methodology produces robust models that meet the standards of a new QSPR formalism and can be a powerful tool to design safe and effective drugs.
DOI: 10.17632/8wvjbcpkfg
title: Plos One DS

description: Systematic literature review on inter-organisational relationships for social impact - dataset
DOI: 10.17632/bhwjts8c58
title: Determination of the supramolecular arrangement of Dinaphtho[2,3-b:2',3'-f]thieno[3,2-b]thiophene films fabricated by Physical Vapour Deposition and possible implications for electronic devices

description: raw data