cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6726713
title: MOESM1 of GrapHi-C: graph-based visualization of Hi-C datasets

description: Additional file 1. Perl script used for converting a contact map into an adjacency matrix based on the graphrepresentation in Fig. 1a.
DOI: 10.6084/m9.figshare.6726713.v1
title: MOESM1 of GrapHi-C: graph-based visualization of Hi-C datasets

description: Additional file 1. Perl script used for converting a contact map into an adjacency matrix based on the graphrepresentation in Fig. 1a.
DOI: 10.6084/m9.figshare.6726704
title: Additional file 1: of Genome-wide identification and expression analysis of Gossypium RING-H2 finger E3 ligase genes revealed their roles in fiber development, and phytohormone and abiotic stress responses

description: Table S1. List of qPCR primers used in this study. Table S2. Gene IDs and proposed information for RING-H2 finger E3 ligase genes of Arabidopsis, rice, G. hirsutum, G. arboreum and G. raimondii. Table S3. Detailed information on the biophysical properties of G. hirsutum RING-H2 finger E3 ligase genes. Table S4. Duplicated gene pairs and the type of duplication. Table S5. G. hirsutum orthologs observed in G. arboreum and G. raimondii genomes. Ka/Ks ratios of investigated orthologs were also computed based on clades. Table S6. cis-element analysis of the promoter regions of 140Â G. hirsutum RING-H2 finger E3 ligase genes. cis-elements were categorized based on their relevance to growth and development, and the light and stress responses of each gene. (XLSX 73 kb)
DOI: 10.6084/m9.figshare.6726704.v1
title: Additional file 1: of Genome-wide identification and expression analysis of Gossypium RING-H2 finger E3 ligase genes revealed their roles in fiber development, and phytohormone and abiotic stress responses

description: Table S1. List of qPCR primers used in this study. Table S2. Gene IDs and proposed information for RING-H2 finger E3 ligase genes of Arabidopsis, rice, G. hirsutum, G. arboreum and G. raimondii. Table S3. Detailed information on the biophysical properties of G. hirsutum RING-H2 finger E3 ligase genes. Table S4. Duplicated gene pairs and the type of duplication. Table S5. G. hirsutum orthologs observed in G. arboreum and G. raimondii genomes. Ka/Ks ratios of investigated orthologs were also computed based on clades. Table S6. cis-element analysis of the promoter regions of 140Â G. hirsutum RING-H2 finger E3 ligase genes. cis-elements were categorized based on their relevance to growth and development, and the light and stress responses of each gene. (XLSX 73 kb)
DOI: 10.6084/m9.figshare.6726695
title: Additional file 1: of Efficiency of cotton bollworm (Helicoverpa armigera Hübner) control of different Bt cotton varieties in North China

description: Table S1–1. Bt cotton varieties monitored from 2008 to 2015. Table S1–2. Single Bt cotton varieties after repeat planted varieties were deleted from 2008 to 2015. Table S2. The study sites that were investigated from 2008 to 2015. Table S3. Plantation area for cotton and other crops that were assessed from 2008 to 2015. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.6726695.v1
title: Additional file 1: of Efficiency of cotton bollworm (Helicoverpa armigera Hübner) control of different Bt cotton varieties in North China

description: Table S1–1. Bt cotton varieties monitored from 2008 to 2015. Table S1–2. Single Bt cotton varieties after repeat planted varieties were deleted from 2008 to 2015. Table S2. The study sites that were investigated from 2008 to 2015. Table S3. Plantation area for cotton and other crops that were assessed from 2008 to 2015. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.6726692
title: Additional file 1: of Postnatal developmental dynamics of cell type specification genes in Brn3a/Pou4f1 Retinal Ganglion Cells

description: Table S1. Semi-quantitative assessment of the expression of potential Brn3a target genes by ISH densitometry. (ZIP 47 kb)
DOI: 10.6084/m9.figshare.6726692.v2
title: Additional file 1: of Postnatal developmental dynamics of cell type specification genes in Brn3a/Pou4f1 Retinal Ganglion Cells

description: Table S1. Semi-quantitative assessment of the expression of potential Brn3a target genes by ISH densitometry. (ZIP 47 kb)
DOI: 10.6084/m9.figshare.6726500
title: Northern Italian Diet.pdf

description: Comparing the Northern Italian diet and the Mediterranean diet with respect to obesity and diabetes<br><br>
DOI: 10.6084/m9.figshare.6726434
title: Dataset for: Spatio-temporal modelling of hydrological return levels. A quantile regression approach

description: Extreme river flows can lead to inundation of floodplains, with consequent impacts for society, the environment and the economy. Extreme flows are inherently difficult to model, being infrequent, irregularly spaced and affected by non-stationary climatic controls. To identify patterns in extreme flows a quantile regression approach can be used. This paper introduces a new framework for spatio-temporal quantile regression modelling, where the regression model is built as an additive model that includes smooth functions of time and space, as well as space-time interaction effects. The model exploits the flexibility that P-splines offer and can be easily extended to incorporate potential covariates. We propose to estimate model parameters using a penalized least squares regression approach as an alternative to linear programming methods, classically used in quantile parameter estimation. The model is illustrated on a data set of flows in 98 rivers across Scotland.
DOI: 10.6084/m9.figshare.6726440.v1
title: Substate Profiling TSR subject programs

description: Contains the source code of the subject programs used for the empirical evaluation.
DOI: 10.6084/m9.figshare.6726419
title: Life never matters in the DEMOCRATS MIND”: Examining Strategies of Retweeted Social Bots During a Mass Shooting Event

description: Social bots on Twitter
DOI: 10.6084/m9.figshare.6726428
title: Eelgrass sediment microbiome as a nitrous oxide sink in brackish Lake Akkeshi, Japan

description: The correspondence table between sample name and ID of <i>nosZ</i> gene reads obtained from eelgrass sediment microbiome as a nitrous oxide sink in blackish Lake Akkeshi, Japan. All metagenomics were deposited in the DNA Data Bank Japan (DDBJ) Sequence Read Archive (DRA) under accession number DRA006867.
DOI: 10.6084/m9.figshare.6726428.v1
title: Eelgrass sediment microbiome as a nitrous oxide sink in brackish Lake Akkeshi, Japan

description: The correspondence table between sample name and ID of <i>nosZ</i> gene reads obtained from eelgrass sediment microbiome as a nitrous oxide sink in blackish Lake Akkeshi, Japan. All metagenomics were deposited in the DNA Data Bank Japan (DDBJ) Sequence Read Archive (DRA) under accession number DRA006867.
DOI: 10.6084/m9.figshare.6726419.v2
title: Life never matters in the DEMOCRATS MIND”: Examining Strategies of Retweeted Social Bots During a Mass Shooting Event

description: Social bots on Twitter
DOI: 10.6084/m9.figshare.6726419.v1
title: Life never matters in the DEMOCRATS MIND”: Examining Strategies of Retweeted Social Bots During a Mass Shooting Event

description: Social bots on Twitter
DOI: 10.6084/m9.figshare.6726413
title: Moloka‘i modeled larval connectivity

description: Spawn to settlement data for eight species of reef fish (<i>Caranx ignoblis, Caranx melampygus, Polydactylus sexfilis, Chlorurus perspicillatus, Scarus rubroviolaceus, Ctenochaetus strigosus </i>and <i>Parupeneus porphyreus</i>) and four species of invertebrate (<i>Cellana</i> spp., <i>Pocillopora meandrina, Panulirus</i> spp., and <i>Octopus cyanea</i>). Data is produced via a individual-based model that incorporates biotic and abiotic data.<br>Each dataset includes species, individual ID, spawning location ID, spawning latitude and longitude, settle location ID, settle latitude and longitude, dispersal distance (km), pelagic larval duration (days), birth day of year, settlement day of year, and temperature, depth, and current velocity at settlement.
DOI: 10.6084/m9.figshare.6726413.v1
title: Moloka‘i modeled larval connectivity

description: Spawn to settlement data for eight species of reef fish (<i>Caranx ignoblis, Caranx melampygus, Polydactylus sexfilis, Chlorurus perspicillatus, Scarus rubroviolaceus, Ctenochaetus strigosus </i>and <i>Parupeneus porphyreus</i>) and four species of invertebrate (<i>Cellana</i> spp., <i>Pocillopora meandrina, Panulirus</i> spp., and <i>Octopus cyanea</i>). Data is produced via a individual-based model that incorporates biotic and abiotic data.<br>Each dataset includes species, individual ID, spawning location ID, spawning latitude and longitude, settle location ID, settle latitude and longitude, dispersal distance (km), pelagic larval duration (days), birth day of year, settlement day of year, and temperature, depth, and current velocity at settlement.
DOI: 10.6084/m9.figshare.6726407
title: Theoretical ribosomal protein mass fingerprint of Vibrio vulnificus

description: This is a dataset containing the theoretical molecular mass of various ribosomal proteins in the large and small ribosome subunit of <i>Vibrio vulnificus</i>.<br><br>
DOI: 10.6084/m9.figshare.6726407.v1
title: Theoretical ribosomal protein mass fingerprint of Vibrio vulnificus

description: This is a dataset containing the theoretical molecular mass of various ribosomal proteins in the large and small ribosome subunit of <i>Vibrio vulnificus</i>.<br><br>
DOI: 10.6084/m9.figshare.6726404
title: Theoretical ribosomal protein mass fingerprint of Vibrio parahaemolyticus

description: This is a dataset containing the theoretical molecular mass of various ribosomal proteins in the large and small ribosome subunit of <i>Vibrio parahaemolyticus.<br></i><br>
DOI: 10.6084/m9.figshare.6726401
title: Theoretical ribosomal protein mass fingerprint of Vibrio alginolyticus

description: This is a dataset containing the theoretical molecular mass of various ribosomal proteins in the large and small ribosome subunit of <i>Vibrio alginolyticus</i>.<br><br>
DOI: 10.6084/m9.figshare.6726404.v1
title: Theoretical ribosomal protein mass fingerprint of Vibrio parahaemolyticus

description: This is a dataset containing the theoretical molecular mass of various ribosomal proteins in the large and small ribosome subunit of <i>Vibrio parahaemolyticus.<br></i><br>
DOI: 10.6084/m9.figshare.6726389
title: Appendix 1_Metadata.xlsx

description: This is a dataset of API and created metadata elements with semiotic values assigned to each element.<br>
DOI: 10.6084/m9.figshare.6726389.v1
title: Appendix 1_Metadata.xlsx

description: This is a dataset of API and created metadata elements with semiotic values assigned to each element.<br>
DOI: 10.6084/m9.figshare.6726401.v1
title: Theoretical ribosomal protein mass fingerprint of Vibrio alginolyticus

description: This is a dataset containing the theoretical molecular mass of various ribosomal proteins in the large and small ribosome subunit of <i>Vibrio alginolyticus</i>.<br><br>
DOI: 10.6084/m9.figshare.6726386
title: Appendix 2_Modal_Elements.xlsx

description: This is a dataset breaking down the modal elements of social media posts in their original contexts compared to simulated archival copies created by screenshotting the posts. Semiotic values have been assigned to these modal elements.<br>
DOI: 10.6084/m9.figshare.6726359
title: Bromelia balansae sequence alignment

description: Fasta file including all sequenced individuals of Bromelia balansae (Bromeliaceae) for <i>rpl32-trnL</i> and <i>psbA-trnH.</i>
DOI: 10.6084/m9.figshare.6726359.v1
title: Bromelia balansae sequence alignment

description: Fasta file including all sequenced individuals of Bromelia balansae (Bromeliaceae) for <i>rpl32-trnL</i> and <i>psbA-trnH.</i>
DOI: 10.6084/m9.figshare.6726329
title: ENMs - Bromelia balansae

description: R custom scripts to perform and map ecological niche modelling to predict the current distribution and paleodistribution of <i>B. balansae.</i>
DOI: 10.6084/m9.figshare.6726329.v1
title: ENMs - Bromelia balansae

description: R custom scripts to perform and map ecological niche modelling to predict the current distribution and paleodistribution of <i>B. balansae.</i>
DOI: 10.6084/m9.figshare.6726326
title: Beast species tree and ESBP analysis - Bromelia balansae

description: Input Beauti files to infer changes in the B. balansae effective population size through time using an extended Bayesian skyline plot (EBSP) framework (Heled and Drummond, 2008) implemented in BEAST version 1.8 (Drummond t al., 2012).
DOI: 10.6084/m9.figshare.6726323
title: Screenshot_20180515-210507.png

description: The big idea change world nwslttrs KSE The search king engine solomon king key=666
DOI: 10.6084/m9.figshare.6726326.v1
title: Beast species tree and ESBP analysis - Bromelia balansae

description: Input Beauti files to infer changes in the B. balansae effective population size through time using an extended Bayesian skyline plot (EBSP) framework (Heled and Drummond, 2008) implemented in BEAST version 1.8 (Drummond t al., 2012).
DOI: 10.6084/m9.figshare.6726314
title: BAPS analysis - Bromelia balansae

description: Input files to perform a population genetic structure analysis using the "spatial clustering of individuals" module of BAPS version 6 (Corander and Tang, 2007).
DOI: 10.6084/m9.figshare.6726314.v1
title: BAPS analysis - Bromelia balansae

description: Input files to perform a population genetic structure analysis using the "spatial clustering of individuals" module of BAPS version 6 (Corander and Tang, 2007).
DOI: 10.6084/m9.figshare.6726323.v2
title: Screenshot_20180515-210507.png

description: The big idea change world nwslttrs KSE The search king engine solomon king key=666
DOI: 10.6084/m9.figshare.6726299
title: Dietary Supplement and Complementary and Alternative Medicine Use Are Highly Prevalent in Patients with Gastrointestinal Disorders: Results from an Online Survey

description: The use of complementary and alternative medicine (CAM) is widespread among adults in the United States to self-treat a range of disorders, including gastrointestinal (GI) disorders. This study determined the self-reported use of CAM, including dietary supplements, in managing GI symptoms among Internet users and investigated perceived effects of supplement use on GI symptoms. We used a cross-sectional, descriptive, correlational design. A Qualtrics online survey was utilized to collect data through various websites. Focused areas include demographics, health evaluation, health issue(s), supplement and CAM use, and GI symptoms. Of the participants included in the study, a majority (88%) were women and half (50.1%) were between the ages of 26 and 45. Most participants (84.5%) reported use of herbal supplements, and 84.8% of the participants used herbal supplements for a specific health problem. The most common reported health condition was gastroesophageal reflux (44.4%). The attrition rate was low at 22%. The novelty of using an anonymous online survey to collect data on supplement use in GI disorders indicated a high prevalence of dietary and herbal supplement use among persons with GI disorders comparable to previous reports. Health-care providers should ask patients about supplement use in addition to prescribed medications and communicate effectively if conventional pharmacotherapy is not sufficient to manage symptoms or patients are inclined to use supplements.
DOI: 10.6084/m9.figshare.6726299.v1
title: Dietary Supplement and Complementary and Alternative Medicine Use Are Highly Prevalent in Patients with Gastrointestinal Disorders: Results from an Online Survey

description: The use of complementary and alternative medicine (CAM) is widespread among adults in the United States to self-treat a range of disorders, including gastrointestinal (GI) disorders. This study determined the self-reported use of CAM, including dietary supplements, in managing GI symptoms among Internet users and investigated perceived effects of supplement use on GI symptoms. We used a cross-sectional, descriptive, correlational design. A Qualtrics online survey was utilized to collect data through various websites. Focused areas include demographics, health evaluation, health issue(s), supplement and CAM use, and GI symptoms. Of the participants included in the study, a majority (88%) were women and half (50.1%) were between the ages of 26 and 45. Most participants (84.5%) reported use of herbal supplements, and 84.8% of the participants used herbal supplements for a specific health problem. The most common reported health condition was gastroesophageal reflux (44.4%). The attrition rate was low at 22%. The novelty of using an anonymous online survey to collect data on supplement use in GI disorders indicated a high prevalence of dietary and herbal supplement use among persons with GI disorders comparable to previous reports. Health-care providers should ask patients about supplement use in addition to prescribed medications and communicate effectively if conventional pharmacotherapy is not sufficient to manage symptoms or patients are inclined to use supplements.
DOI: 10.6084/m9.figshare.6726188
title: Annotations categorized as false

description: Annotations categorized as false
DOI: 10.6084/m9.figshare.6726176
title: Annotation distribution of the three maps

description: Annotation distribution of the three maps
DOI: 10.6084/m9.figshare.6726188.v1
title: Annotations categorized as false

description: Annotations categorized as false
DOI: 10.6084/m9.figshare.6726152
title: Survey Results of the Pilot Study

description: Survey Results of the Pilot Study with two participants
DOI: 10.6084/m9.figshare.6726152.v1
title: Survey Results of the Pilot Study

description: Survey Results of the Pilot Study with two participants
DOI: 10.6084/m9.figshare.6726140
title: Kelvin Helmholtz

description: Kelvin Helmholtz
DOI: 10.6084/m9.figshare.6726140.v1
title: Kelvin Helmholtz

description: Kelvin Helmholtz
DOI: 10.6084/m9.figshare.6726143
title: Upper Palaeolithic land use in the Cserhát Mts., Hungary

description: Adatbázis a "Őskörnyezeti tényezők szerepe a felső paleolitikus tájhasználati stratégiákban a Cserhát területén" kutatáshoz. Database of the 'Upper Palaeolithic landuse in the Cserhát Mts., Hungary' project. See the details in the documentation.
DOI: 10.6084/m9.figshare.6726143.v2
title: Upper Palaeolithic land use in the Cserhát Mts., Hungary

description: Adatbázis a "Őskörnyezeti tényezők szerepe a felső paleolitikus tájhasználati stratégiákban a Cserhát területén" kutatáshoz. Database of the 'Upper Palaeolithic landuse in the Cserhát Mts., Hungary' project. See the details in the documentation.
DOI: 10.6084/m9.figshare.6726143.v1
title: Upper Palaeolithic land use in the Cserhát Mts., Hungary

description: Adatbázis a "Őskörnyezeti tényezők szerepe a felső paleolitikus tájhasználati stratégiákban a Cserhát területén" kutatáshoz. Database of the 'Upper Palaeolithic landuse in the Cserhát Mts., Hungary' project. See the details in the documentation.
DOI: 10.6084/m9.figshare.6726068
title: A summary of functionally annotated variants in H2 genome.

description: Annotated variants in H2 genome.
DOI: 10.6084/m9.figshare.6726068.v1
title: A summary of functionally annotated variants in H2 genome.

description: Annotated variants in H2 genome.
DOI: 10.6084/m9.figshare.6726062
title: The chromosomal distribution of the total variants in H2 genome.

description: The total variants identified in H2 genome.
DOI: 10.6084/m9.figshare.6726062.v1
title: The chromosomal distribution of the total variants in H2 genome.

description: The total variants identified in H2 genome.
DOI: 10.6084/m9.figshare.6726065.v1
title: Public FA Data.xlsx

description: This database contains all variables used in the analysis of the association between symptoms of food addiction and various metabolic characteristics including insulin resistance and lipid profiles in the general Newfoundland population<br>
DOI: 10.6084/m9.figshare.6726056
title: A summary of functionally annotated variants in H1 genome

description: Annotated variants in H1 genome
DOI: 10.6084/m9.figshare.6726047
title: The chromosomal distribution of the total variants in H1 genome

description: Total variants identified in H1 genome
DOI: 10.6084/m9.figshare.6726047.v1
title: The chromosomal distribution of the total variants in H1 genome

description: Total variants identified in H1 genome
DOI: 10.6084/m9.figshare.6726056.v1
title: A summary of functionally annotated variants in H1 genome

description: Annotated variants in H1 genome
DOI: 10.6084/m9.figshare.6726038
title: Metadata in the category "Other"

description: Metadata in the category "Other". This contains a table with the frequencies and a diagram visualizing this table.
DOI: 10.6084/m9.figshare.6726038.v1
title: Metadata in the category "Other"

description: Metadata in the category "Other". This contains a table with the frequencies and a diagram visualizing this table.
DOI: 10.6084/m9.figshare.6725258.v1
title: Side by side? Vascular plant, invertebrate, and microorganism distribution patterns along an alpine to nival elevation gradient

description: High mountain areas above the alpine zone are, despite the low-temperature conditions, inhabited by evolutionary and functionally differing organism groups. We compared the abundance and species richness of vascular plants, oribatid mites, springtails, spiders, and beetles, as well as bacterial and methanogenic archaeal prokaryotes (only abundance), at 100 m vertical intervals from 2,700–3,400 m in the Central Alps. We hypothesized that the less mobile microarthropods and microorganisms are more determined by and respond in similar ways to soil properties as do vascular plants. In contrast, we expected the more mobile surface-dwelling groups to forage also in places devoid of vegetation and thus to show patterns that deviate from that of vascular plants. Surprisingly, the observed patterns were diametrically opposed to our expectations: soil-living oribatid mites and springtails showed high individual numbers at high elevations, even where vascular plants barely occurred. Springtails also showed a rather constant species richness throughout the entire gradient. In contrast, patterns of surface-dwelling organisms and of archaeal prokaryotes did not differ significantly from vascular plants, because of either comparable climate sensitivity or their dependency on vegetated habitats. This study may serve as a baseline to estimate the risks of biodiversity losses in response to climate change across different biotic ecosystem components and to explore the potential and limitations of vascular plants as proxy for other organism groups that are far more challenging to monitor.
DOI: 10.6084/m9.figshare.6725177
title: Maps used in the crowdsourcing experiment

description: Three maps used in the crowdsourcing experiment <br>- Batavia- Ambarawa en Salatiga en Omstreken- Sourabaya
DOI: 10.6084/m9.figshare.6725177.v1
title: Maps used in the crowdsourcing experiment

description: Three maps used in the crowdsourcing experiment <br>- Batavia- Ambarawa en Salatiga en Omstreken- Sourabaya
DOI: 10.6084/m9.figshare.6725129
title: Experiment Data.xlsx

description: Collected data for thesis experiment
DOI: 10.6084/m9.figshare.6725114
title: Experiment Data.numbers

description: Data for thesis
DOI: 10.6084/m9.figshare.6725114.v1
title: Experiment Data.numbers

description: Data for thesis
DOI: 10.6084/m9.figshare.6725111
title: Survey results of the experiment (Dutch)

description: Survey results of the crowdsourcing experiment (Dutch)
DOI: 10.6084/m9.figshare.6725111.v2
title: Survey results of the experiment (Dutch)

description: Survey results of the crowdsourcing experiment (Dutch)
DOI: 10.6084/m9.figshare.6725111.v1
title: Untitled Item

description: Survey results of the crowdsourcing experiment (Dutch)
DOI: 10.6084/m9.figshare.6725084
title: Annotation in RDF language

description: Annotations of the three maps provided by the participants (RDF language)