cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.xgxd254jf
title: Southern Greater Glider spotlighting surveys conducted in 2021 in the Victorian Central Highlands Australia

description: Data used for Elevation, disturbance, and forest type drive the occurrence
 of a specialist arboreal folivore as published in PLOS ONE. These
 are the results of Spotlighting surveys for Greater Gliders in the
 Victorian Central Highlands in Australia.
description: Data was collected spotlighting in
 the Victorian Central Highlands. SiteCode: Unique study site identifier
 (1 hectare in size) GreaterGlider: the number of greater
 gliders observed via spotlighting on the site NoStags: The number of hollow bearing
 trees on the site ForestAge: categorical variable with 4
 levels (OG= old growth, 1926.1939 = fires occurring between 1926 and 1939,
 1960-1990 = fires occurring between 160 and 1990, 2009) MinTempGT20:  the number of days the
 site experienced a minimum daily temperature above 20 degrees from
 2015-2019 MaxTempGT35:
 the number of days the site experienced a maximum daily temperature above
 35 degrees from 2015-2019 CanopyVisibility: excellent, moderate or
 poor. DEMmASL10mRes:
 elevation in meters above sea level  as measured by a digital elevation
 model with a 10m resolution.
DOI: 10.13144/lil-0135
title: Enquête Structure des salaires (ESS) - 1986

description: L'enquête sur la structure et la répartition des salaires dans l'industrie et les services, effectuée en 1986 a été conduite à l'initiative de l'INSEE. Elle fait suite aux enquêtes communautaires de l'OSCE de 1966, 1972, 1978. Cette enquête a été maintenue en France. On y trouve des informations inexistantes dans d'autres sources telles que l'ancienneté dans l'entreprise, les absences de travail, le régime d'indemnisation de l'absence maladie, le système de rémunération. Les indicateurs de cette enquête portent principalement sur : - le niveau de salaire et la composition de celui-ci en salaire de base - les primes et heures supplémentaires - les caractéristiques personnelles des salariés (âge, sexe, ancienneté etc.) - les caractéristiques de l'unité de production (activité économique, taille, lieu d'implantation) - les caractéristiques liées au contrat de travail. Les méthodes de recueil des informations, la technique de sondage, le champ couvert présentent des différences méthodologiques avec les autres moyens d'information sur les salaires. Ces différences aboutissent à certaines difficultés de comparaisons des données avec ces autres sources. Par exemple le salaire brut obtenu par l'enquête sur la structure des salaires (ESS) n'est pas comparable au salaire net obtenu par les déclarations annuelles de données sociales (DADS).
DOI: 10.5061/dryad.qv9s4mwgr
title: A test of frequency dependent selection in the evolution of a generalist phenotype

description: A solitary population of consumers frequently evolves to the middle of a
 resource gradient and an intermediate mean phenotype compared to a
 sympatric pair of competing species that diverge to either side via
 character displacement. The forces governing the distribution of
 phenotypes in these allopatric populations, however, are little
 investigated. Theory predicts that the intermediate mean phenotype of the
 generalist should be maintained by negative frequency dependent selection,
 whereby alternate extreme phenotypes are favored because they experience
 reduced competition for resources when rare. However, the theory makes
 assumptions that are not always met, and alternative explanations for an
 intermediate phenotype are possible. We provide a test of this prediction
 in a mesocosm experiment using threespine stickleback that are
 ecologically and phenotypically intermediate between the more specialized
 stickleback species that occur in pairs. We manipulated the frequency
 distribution of phenotypes in two treatments and then measured effects on
 a focal intermediate population. We found a slight frequency-dependent
 effect on survival in the predicted direction but not on individual growth
 rates. This result suggests that frequency dependent selection might be a
 relatively weak force across the range of phenotypes within an
 intermediate population and we suggest several general reasons why this
 might be so. We propose that allopatric populations might often be
 maintained at an intermediate phenotype instead by stabilizing or
 fluctuating directional selection.
DOI: 10.5281/zenodo.17949630
title: Database experimental data (dataset 2 of 4) "Visualization and quantification of gas-liquid mass transfer in a sparger flow using a wire-mesh sensor", dataset 2 of 4, tracer series

description: ## DATABASE EXPERIMENTAL DATA (DATASET 2 OF 4) "VISUALIZATION AND QUANTIFICATION OF GAS-LIQUID MASS TRANSFER IN A SPARGER FLOW USING A WIRE-MESH SENSOR", DATASET 2 OF 4, TRACER SERIESReference Open-Access journal publication: Alvaro Ramos Perez, Terttaliisa Lind, Victor Petrov, Annalisa Manera, Horst-Michael Prasser, Visualization and quantification of gas–liquid mass transfer in a sparger flow using a wire-mesh sensor, Chemical Engineering Science, Volume 320, Part A, 2026, 122360, ISSN 0009-2509, doi:10.1016/j.ces.2025.122360.

## THIS DATA CORRESPONDS TO THE DATASET 2 OF 4, TRACER SERIES. THE ENTIRE DATASET LIST OF THE PUBLICATION IS:-DATASET 1 OF 4, CALIBRATION SERIES-DATASET 2 OF 4, TRACER SERIES-DATASET 3A+3B OF 4, CO2 SERIES-DATASET 4 OF 4, AIR SERIES

## WMS DATA"README_WMS.txt": Description of data matrix "WMS.csv" and data format "WMS.zip"
DOI: 10.5281/zenodo.17949631
title: Database experimental data (dataset 2 of 4) "Visualization and quantification of gas-liquid mass transfer in a sparger flow using a wire-mesh sensor", dataset 2 of 4, tracer series

description: ## DATABASE EXPERIMENTAL DATA (DATASET 2 OF 4) "VISUALIZATION AND QUANTIFICATION OF GAS-LIQUID MASS TRANSFER IN A SPARGER FLOW USING A WIRE-MESH SENSOR", DATASET 2 OF 4, TRACER SERIESReference Open-Access journal publication: Alvaro Ramos Perez, Terttaliisa Lind, Victor Petrov, Annalisa Manera, Horst-Michael Prasser, Visualization and quantification of gas–liquid mass transfer in a sparger flow using a wire-mesh sensor, Chemical Engineering Science, Volume 320, Part A, 2026, 122360, ISSN 0009-2509, doi:10.1016/j.ces.2025.122360.

## THIS DATA CORRESPONDS TO THE DATASET 2 OF 4, TRACER SERIES. THE ENTIRE DATASET LIST OF THE PUBLICATION IS:-DATASET 1 OF 4, CALIBRATION SERIES-DATASET 2 OF 4, TRACER SERIES-DATASET 3A+3B OF 4, CO2 SERIES-DATASET 4 OF 4, AIR SERIES

## WMS DATA"README_WMS.txt": Description of data matrix "WMS.csv" and data format "WMS.zip"
DOI: 10.5061/dryad.rn8pk0pct
title: Inbreeding and kinship coefficients of parents of sperm competition experiment with lake char (Lake Geneva 2017/18)

description: A total of 14 lake char (Salvelinus umbla) were genotyped in the same
 library using ddRADsequencing. The data includes 14 gzipped .fastq files
 generated using 2 lanes of sequencing on an Illumina HIseq 2500 and the
 final dataset with the final estimates of kinship and inbreeding. For each
 individual, the fastq files of the 2 sequencings lanes were merged after
 demultiplexing using process_radtags (Stacks 1.48). We provide the bash
 and R scripts that we used. There are no legal or ethical considerations
 regarding the above-mentioned data.
description: See Nusbaumer et al., 2021 Nusbaumer D., Garaud L., de Guttry C., Ançay L., Wedekind C. 2021 Sperm of more colorful males are better adapted to ovarian fluids in lake char (Salmonidae). <em style="font-family:Helvetica;font-size:14px;font-weight:normal;letter-spacing:normal;text-align:start;text-indent:-36px;white-space:normal;text-decoration:none;">bioRxiv</em>. (doi: https://doi.org/10.1101/2021.10.02.462848).
description: Starting from the .fastq files it is possible to reproduce the
 result by following the provided scripts. Genomic data processing was done
 on bash together with MLH estimates. Kinship and inbreeding coefficients
 were estimated using R package Hierfstat.
DOI: 10.5061/dryad.mw6m905zn
title: Local anthropogenic stress does not exacerbate coral bleaching under global climate change

description: Aim. Rising ocean temperatures are widely recognised as the dominant
 driver behind the rapid degradation of coral reefs via the process of
 coral bleaching (the expulsion of photosynthetic endosymbionts which
 reveals the coral skeleton). However, bleaching of hard corals is often
 assumed to be further aggravated by the effect of local-scale stressors
 from anthropogenic activity, accelerating coral reef decline where these
 stressors are stronger. Despite the importance of this hypothesis, the
 interaction between climate change and local stressors for driving coral
 bleaching has only been investigated in a handful of studies, with no
 large-scale (regional or global) test conducted thus far. We investigate
 the impact of human population density (HPD) – a proxy for local stressors
 - in both protected and non-protected marine regions, and their
 interaction under heat stress as drivers of coral bleaching. Location.
 Global. Time period. 2002-2018. Major Taxa Studied. Scleractinia corals.
 Methods. Using 9,170 coral reef surveys worldwide, we performed Bayesian
 modeling to assess the probability of coral bleaching in response to
 local-scale stressors in interaction with global warming. Results. Local
 HPD does not exacerbate coral bleaching, either independently or under
 thermal stress from climate change. Rather, the relationship between HPD
 and temperature stress appears weakly antagonistic for coral bleaching,
 contradicting the expectation that HPD increases the sensitivity of corals
 to bleaching under thermal stress. Main conclusions. Local HPD does not
 interact with global warming by degrading coral reefs. However, regional
 variation in bleaching patterns exists. Consequently, bleaching will
 continue to occur on most coral reefs globally regardless of local HPD.
 Thus, it is likely that even isolated, well-protected, coral reefs will
 continue to decline because of climate warming-induced bleaching.
 Therefore, tackling the source of global warming remains the most
 effective way of mitigating coral reef decline via coral bleaching.
description: Please refer to the ReadMe file and see my github page
 https://github.com/JackVJohnson/Bleaching_local_stressors.
DOI: 10.5061/dryad.vmcvdncvr
title: The last representatives of the Superfamily Wellerelloidea (Brachiopoda, Rhynchonellida) in the westernmost Tethys (Iberian paleomargins) prior to their demise in the Early Toarcian Mass Extinction Event

description: The last clade-level extinction episode affecting the Phylum Brachiopoda
 has been long-established in the Early Toarcian Mass Extinction Event
 (ETMEE) around the Pliensbachian-Toarcian transition, when several
 rhynchonellide groups became extinct and others underwent a notable
 renewal in the western Tethys. Among them, Wellerelloidea is a long-range
 superfamily severely affected by this environmental crisis, embodying the
 subfamily Cirpinae as the last wellerelloids worldwide, prior to their
 global extinction in the Pb-To transition. The profuse record of Lower
 Jurassic cirpines in the peri-Iberian paleomargins provides an opportunity
 to clarify the taxonomy of wellerelloid species in the pre-extinction
 interval. A new species (Cirpa lucentina) is erected and the revision of
 the Cirpinae taxa around the ETMEE is carried out. Morphometric analysis
 and the study of internal structures of the shells support the splitting
 between the genera Cirpa and Salgirella, adding new supplementary
 diagnostic criteria. The biogeographic distribution of this clade in the
 western Tethys and its evolutionary history in the Early Jurassic reveal a
 pervasive colonization pattern of both epicontinental and epioceanic
 habitats. The Mediterranean origin of the last representatives of this
 group is ascertained, but while diversification of Salgirella took place
 in epioceanic habitats, speciation of Cirpa is unrelated to biochorema
 boundaries, even colonizing epicontinental seas until their extinction
 prior to the hyperwarming event that occurred in the basal Serpentinum
 Zone. A rhynchonellide morphogroup epitomized by cirpines was resilient to
 this event in the epicontinental seas. This morphogroup is also recorded
 after the extinction interval by means of the genus Pseudogibbirhynchia,
 thus postulating potential pre- and post-extinction phyletic
 relationships.
description: - Field sampling - Repositories
 - Main Biometric parameters and indices
DOI: 10.13144/lil-0136
title: Enquête Coût de la main d'oeuvre et structure des salaires (ECMOSS) - 1992

description: En 1992, l'enquête sur la structure des salaires s'inscrit dans le cadre de l'enquête européenne sur le coût de la main d'oeuvre (ECMO) qui est menée conjointement dans tous les pays de l'union européenne tous les 4 ans. Le but de cette enquête est de disposer d'un ensemble de statistiques comparables sur les coûts salariaux directs et indirects dans les pays de l'Union Européenne. La base de sondage utilisée pour le tirage de l'échantillon a été le répertoire SIRENE mis à jour au 31 décembre 1991. Les critères de détermination du sondage sont la taille de l'établissement, l'activité principale en nomenclature NAP et la localisation géographique. L'échantillon comprend 26 000 établissements soit environ 250 000 salariés. L'enquête sur la structure des salaires permet d'obtenir des informations sur : - le salaire brut annuel, - la composition de celui-ci (salaire de base, primes, heures supplémentaires) - les caractéristiques individuelles du salarié (sexe, âge, ancienneté dans l'entreprise etc.) - les caractéristiques de l'établissement employeur (activité économique, taille, implantation géographique). L'ensemble permet d'analyser de manière assez complète les écarts de salaire entre individus.
DOI: 10.5061/dryad.sf7m0cg83
title: Planning for Resilience: Incorporating scenario and model uncertainty and trade-offs when prioritizing management of climate refugia

description: Climate change has become the greatest threat to the world’s ecosystems.
 Locating and managing areas that contribute to the survival of key species
 under climate change is critical for the persistence of ecosystems in the
 future. Here we identify “Climate Priority” sites as coral reefs exposed
 to relatively low levels of climate stress that will be more likely to
 persist in the future. We present the first analysis of uncertainty in
 climate change scenarios and models, along with multiple objectives, in a
 marine spatial planning exercise and offer a comprehensive approach to
 incorporating uncertainty and trade-offs in any ecosystem. We first
 described each site using environmental characteristics that are
 associated with a higher chance of persistence (larval connectivity,
 hurricane influence and acute and chronic temperature conditions in the
 past and the future). Future temperature increases were assessed using
 downscaled data under four different climate scenarios (SSP1 2.6, SSP2
 4.5, SSP3 7.0 and SSP5 8.5) and 57 model runs. We then prioritized sites
 for intervention (conservation, improved management or restoration) using
 robust decision-making approaches that select sites that will have a
 benign climate under most climate scenarios and models. The modeling work
 is novel because it solves two important issues. 1) It considers
 trade-offs between multiple planning objectives explicitly through Pareto
 analyses; and 2) It makes use of all the uncertainty around future climate
 change. Priority intervention sites identified by the model were verified
 and refined through local stakeholder engagement including assessments of
 local threats, ecological condition and government priorities. The
 workflow is presented for the Insular Caribbean and Florida, and at the
 national level for Cuba, Jamaica, Dominican Republic and Haiti. Our
 approach allows managers to consider uncertainty and multiple objectives
 for climate smart spatial management in coral reefs or any ecosystem
 across the globe.
description: <strong>coralcarib-refuges-inputs.shp:</strong> Input
 dataset was produced from modeled and satellite data
 <strong>coralcarib-refuges-ranking.shp:
 </strong>Output dataset was produced from input data through
 modeling Please read the details for both files in
 "README" file
DOI: 10.5061/dryad.msbcc2g10
title: Profiling, monitoring and conserving caterpillar fungus in the Himalayan region using anchored hybrid enrichment markers

description: The collection of caterpillar fungus accounts for 50-70% of the household
 income of thousands of Himalayan communities and has an estimated market
 value of $5-11 billion across Asia. However, Himalayan collectors are at
 multiple economic disadvantages compared with collectors on the Tibetan
 plateau because their product is not legally recognized. Using a
 customized hybrid-enrichment probe set and market-grade caterpillar fungus
 (with samples up to 30 years old) from 94 production zones across Asia, we
 uncovered clear geography-based signatures of historical dispersal and
 significant isolation-by-distance among caterpillar fungus hosts. This
 high-throughput approach can readily distinguish samples from major
 production zones with definitive geographical resolution, especially for
 samples from the Himalayan region that form monophyletic clades in our
 analysis. Based on these results, we propose a two-step procedure to help
 local communities authenticate their produce and improve this
 multi-national trade route without creating opportunities for illegal
 exports and other forms of economic exploitation. We argue that policy
 makers and conservation practitioners must encourage the fair trade of
 caterpillar fungus in addition to sustainable harvesting to support a
 transboundary conservation effort that is much needed for this natural
 commodity in the Himalayan region.
DOI: 10.5061/dryad.stqjq2c57
title: Supporting data: Speciation and population divergence in a mutualistic seed dispersing bird

description: Bird-mediated seed dispersal is crucial for the regeneration and viability
 of ecosystems, often resulting in complex mutualistic species networks.
 Yet, how this mutualism drives the evolution of seed dispersing birds is
 still poorly understood. In the present study we combine whole genome
 re-sequencing analyses and morphometric data to assess the evolutionary
 processes that shaped the diversification of the Eurasian nutcracker
 (Nucifraga), a seed disperser known for its mutualism with pines (Pinus).
 Our results show that the divergence and phylogeographic patterns of
 nutcrackers resemble those of other non-mutualistic passerine birds and
 suggests that their early diversification was shaped by similar
 biogeographic and climatic processes. The limited variation in foraging
 traits indicates that local adaptation to pines likely played a minor
 role. Our study shows that close mutualistic relationships between bird
 and plant species might not necessarily act as a primary driver of
 evolution and diversification in resource-specialized birds. The
 supporting data include VCF-files for the different population genetic
 analyses, the morphometric data set, as well as the data set related to
 the phylogenetic analyses.
DOI: 10.5061/dryad.j9kd51cfh
title: Cleavage of SARS-CoV-2 spike protein mutants

description: Several SARS-CoV-2 variants emerged that harbor mutations in the surface
 unit of the viral spike (S) protein that enhance infectivity and
 transmissibility. Here, we analyzed whether ten naturally-occurring
 mutations found within the extended loop harboring the S1/S2 cleavage site
 of the S protein, a determinant of SARS-CoV-2 cell tropism and
 pathogenicity, impact S protein processing and function. None of the
 mutations increased but several decreased S protein cleavage at the S1/S2
 site, including S686G and P681H, the latter of which is found in variants
 of concern B.1.1.7 (Alpha variant) and B.1.1.529 (Omicron variant). None
 of the mutations reduced ACE2 binding and cell-cell fusion although
 several modulated the efficiency of host cell entry. The effects of
 mutation S686G on viral entry were cell-type dependent and could be linked
 to the availability of cathepsin L for S protein activation. These results
 show that polymorphisms at the S1/S2 site can modulate S protein
 processing and host cell entry.
DOI: 10.5061/dryad.80gb5mksq
title: Integrating laboratory experiments and biogeographic modelling approaches to understand sensitivity to ocean warming in rare and common marine annelids

description: Among ectotherms, rare species are expected to have a narrower thermal
 niche breadth and reduced acclimation capacity and thus be more vulnerable
 to global warming than their common relatives. To assess these hypotheses,
 we experimentally quantified the thermal sensitivity of seven common,
 uncommon, and rare species of temperate marine annelids of the genus
 Ophryotrocha to assess those species’ vulnerability to ocean warming. We
 measured the upper and lower limits of physiological thermal tolerance,
 survival, and reproductive performance of each species along a temperature
 gradient (18, 24, and 30 °C). We then combined this information to produce
 curves of each species’ fundamental thermal niche by including trait
 plasticity. Each thermal curve was then expressed as a habitat suitability
 index (HSI) and projected for the Mediterranean Sea and temperate Atlantic
 Ocean under a present day (1970-2000), mid- (2050-2059) and late-
 (2090-2099) 21st Century scenario for two climate change scenarios (RCP2.6
 and RCP8.5). Rare and uncommon species showed a reduced upper thermal
 tolerance compared to common species, and the niche breadth and
 acclimation capacity were comparable among groups. The simulations
 predicted an overall increase in the HSI for all species and identified
 potential hotspots of HSI decline for uncommon and rare species along the
 warm boundaries of their potential distribution, though they failed to
 project the higher sensitivity of these species into a greater
 vulnerability to ocean warming. In the discussion, we provide elements and
 caveats on the implications of our results for conservation efforts.
description: See Material and Methods in the pre-print
 https://doi.org/10.21203/rs.3.rs-242007/v1
DOI: 10.5061/dryad.79cnp5hxk
title: Raw data for: Captivating color: evidence for optimal stimulus design in a polymorphic prey lure

description: Many species – humans included – employ color as an instrument of
 deception. One intriguing example of this resides in the conspicuous
 abstract color patterns displayed on the bodies of female orb weaving
 spiders. These displays increase prey interception rates and thereby
 function at least as visual lures. Their chromatic properties however vary
 extensively, both across and within species, with discrete forms often
 co-existing in the manner of a stable polymorphism. Variation is
 principally expressed in terms of signal hue (color per se), but it is
 unclear how attractiveness scales with this property and if extant morphs
 are maximally attractive relative to a graded range of potential
 alternatives. We examined these questions by assessing catch rates among
 color-manipulated females of the dimorphic jeweled spider Gasteracantha
 fornicata in their natural webs. The manipulation altered dorsal
 appearance in a manner akin to adding six new variants of their existing
 white/yellow phenotypes. This magnified the natural variation in stimulus
 hue independently of chroma (saturation) across a range spanning most of
 the color spectrum. Catch rate varied across treatments in simple
 accordance with how greatly stimulus hue deviated from either of the two
 extant spider phenotypes. Predictions based upon fly-perceived chromatic
 and achromatic background contrast were clearly unsupported despite
 dipterans constituting ~60 % of identifiable prey. This study supports the
 importance of signal coloration per se in G. fornicata and suggests that
 extant lure phenotypes reside in a broadly optimal spectral range for
 stimulating their aggregate prey community.