cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25351405
title: Dataset on cardiac structural and functional parameters in TMAO-challenged mouse

description: The dataset underpinning this investigation is stratified into two distinct subsets: the primary analyzed dataset, conducive to the execution of explicit differential assessments, and the auxiliary corpus of unprocessed raw data, emanating directly from the echocardiographic software, which affords the flexibility for indefinite re-evaluation of cardiac metrics. The curated analyzed dataset comprises a compendium of echocardiographic images and corresponding tabular records for a cohort of 16 murine models subjected to a 6-week dietary regimen enriched with TMAO, in juxtaposition with a control contingent of 18 specimens. Each subject's data portfolio encompasses a sextet of images, inclusive of both M-mode and B-mode echocardiographic projections, captured from the parasternal long-axis and apical four-chamber orientations, alongside a duo of supplementary M-mode representations with embedded cardiac functional parameters. The quantitative structural parameters delineated within the accompanying Excel spreadsheets are derived from a rigorous analysis of M-mode echocardiographic sequences. The acquisition of all image data was facilitated by echocardiographic specialists, ensuring a standardized resolution of 96 dots per inch (dpi), with image dimensions of 1920 pixels in width and 992 pixels in height, thereby ensuring a consistent framework for subsequent image analysis.
DOI: 10.6084/m9.figshare.25351405.v1
title: Dataset of contrast of cardiac parameters in TMAO mice models

description: The dataset underpinning this investigation is stratified into two distinct subsets: the primary analyzed dataset, conducive to the execution of explicit differential assessments, and the auxiliary corpus of unprocessed raw data, emanating directly from the echocardiographic software, which affords the flexibility for indefinite re-evaluation of cardiac metrics. The curated analyzed dataset comprises a compendium of echocardiographic images and corresponding tabular records for a cohort of 16 murine models subjected to a 6-week dietary regimen enriched with TMAO, in juxtaposition with a control contingent of 18 specimens. Each subject's data portfolio encompasses a sextet of images, inclusive of both M-mode and B-mode echocardiographic projections, captured from the parasternal long-axis and apical four-chamber orientations, alongside a duo of supplementary M-mode representations with embedded cardiac functional parameters. The quantitative structural parameters delineated within the accompanying Excel spreadsheets are derived from a rigorous analysis of M-mode echocardiographic sequences. The acquisition of all image data was facilitated by echocardiographic specialists, ensuring a standardized resolution of 96 dots per inch (dpi), with image dimensions of 1920 pixels in width and 992 pixels in height, thereby ensuring a consistent framework for subsequent image analysis. Table 1 encapsulates the details of the dataset.
DOI: 10.6084/m9.figshare.25158092
title: FACTOR ANALYSIS KHAULA 3 DATA.spv

description: Objective of the study was to assess the construct validity and reliability of newly developed 48-itemed Professionalism Assessment Tool.Principal component factor analysis and reliability analysis was performed to estimate the validity and reliability. The 48 item Preliminary tool was reduced based on the findings of identical factor loadings and inter-item correlations. The Scale then consisted of 16 items with five subscales (SS), and was called the Professional Assessment Tool (PAT).Four factors were obtained on exploratory PCA. Nine items loaded on Factor 1 and merged the items on the proposed P-SS2 and P-SS3 subscales of “Ethics and personal characteristics” into one (SS1). SS2 was validated as all three items loaded on this subscale were related to “Effective communication and doctor-patient relationship.” SS3 and SS4 separated out the four items included in the P-SS4 of ‘Supports Community Needs and Others’ into SS3 of “Respects and Supports Others” and into SS4 with items related to “collegiality: Responsive to Community Needs and Other Health Professionals”. The 16-item PAT had an overall reliability (Cronbach’s alpha) of 0.856. The Reliability of the new Subscales obtained after PCA for SS1 was 0.767, for SS2 was 0.726, for SS3 was 0.568 and for SS4 was 0.380.The final tool developed for assessment of professionalism had 16 items on a 7-point Likert-like scale, across 4 Subscales, which enhanced its feasibility and practicalit. Results show that it can be used for assessment of professionalism in undergraduate medical students to generate reliable results for valid decision-making for assessment of professionalism in undergraduate students
DOI: 10.6084/m9.figshare.25158092.v1
title: FACTOR ANALYSIS KHAULA 3 DATA.spv

description: Objective of the study was to assess the construct validity and reliability of newly developed 48-itemed Professionalism Assessment Tool.Principal component factor analysis and reliability analysis was performed to estimate the validity and reliability. The 48 item Preliminary tool was reduced based on the findings of identical factor loadings and inter-item correlations. The Scale then consisted of 16 items with five subscales (SS), and was called the Professional Assessment Tool (PAT).Four factors were obtained on exploratory PCA. Nine items loaded on Factor 1 and merged the items on the proposed P-SS2 and P-SS3 subscales of “Ethics and personal characteristics” into one (SS1). SS2 was validated as all three items loaded on this subscale were related to “Effective communication and doctor-patient relationship.” SS3 and SS4 separated out the four items included in the P-SS4 of ‘Supports Community Needs and Others’ into SS3 of “Respects and Supports Others” and into SS4 with items related to “collegiality: Responsive to Community Needs and Other Health Professionals”. The 16-item PAT had an overall reliability (Cronbach’s alpha) of 0.856. The Reliability of the new Subscales obtained after PCA for SS1 was 0.767, for SS2 was 0.726, for SS3 was 0.568 and for SS4 was 0.380.The final tool developed for assessment of professionalism had 16 items on a 7-point Likert-like scale, across 4 Subscales, which enhanced its feasibility and practicalit. Results show that it can be used for assessment of professionalism in undergraduate medical students to generate reliable results for valid decision-making for assessment of professionalism in undergraduate students
DOI: 10.34740/kaggle/dsv/7850828
title: EMAHA-DB6
DOI: 10.1285/i9788883052026n3
title: Il respiro delle parole. Quando la scienza incontra la poesia
DOI: 10.1285/i9788883052026n3p1
title: Frontespizio e pagine iniziali
DOI: 10.1285/i9788883052026n3p5
title: Indice
DOI: 10.1285/i9788883052026n3p7
title: Introduzione
DOI: 10.1285/i9788883052026n3p9
title: Il respiro delle parole
DOI: 10.6084/m9.figshare.25406338
title: Bimolecular Complementation Results for interaction between photocycle mutants of Arabidopsis phototropin 2 - Laser Scanning Confocal Microscope Images

description: Laser Scanning Confocal Images (Zeiss LSM 880) of Nicotiana thaliana leaf tisue transiently expressing phototropin connected with parts of GFP for Bimolecular Fluorecence Complementation Studies. Images takes two days after transformation. Plants grown in LED illuminated chamber in a photoperiod.
DOI: 10.1285/i9788883052026n3p11
title: Filastrocche letterarie
DOI: 10.1285/i9788883052026n3p13
title: Premessa
DOI: 10.1285/i9788883052026n3p15
title: Penne universitarie
DOI: 10.1285/i9788883052026n3p49
title: Filastrocche scientifiche
DOI: 10.1285/i9788883052026n3p51
title: Premessa
DOI: 10.1285/i9788883052026n3p55
title: Penne universitarie
DOI: 10.6084/m9.figshare.25416262
title: Water Vole All Code.R

description: Research into the habitat preferences of reintroduced water voles in order to identify habitat factors which may maximise success of future reintroduction programs
DOI: 10.1285/i9788883052026n3p71
title: Filastrocche di introspezione
DOI: 10.1285/i9788883052026n3p73
title: Premessa
DOI: 10.1285/i9788883052026n3p75
title: Penne universitarie
DOI: 10.1285/i9788883052026n3p83
title: Quaderno operativo
DOI: 10.1285/i9788883052026n3p99
title: Appendice. Elementi di metrica
DOI: 10.1285/i9788883052026n3p115
title: Bibliografia
DOI: 10.1285/i9788883052026n3p121
title: Indice filastrocche
DOI: 10.1285/i9788883052026n3p124
title: Colophon
DOI: 10.34740/kaggle/dsv/7851190
title: ⏳ endoflife.date database (duckdb)
DOI: 10.57766/ipen/zurbfk
title: Data related to the study of MgB4O7:Ce,Li produced as glass-ceramic for OSL dosimetry

description: Here is all data collected on the scope of the postdoc project entitled "Optimization of the production techniques and investigation of the viability of MgB4O7:Ce,Li as a dosimetric material".
DOI: 10.57745/xzwm9k
title: Phytool-v3.2.tab

description: :unav
DOI: 10.6084/m9.figshare.25075421.v1
title: R script and Dataset to reproduce data for "<b>Mutation rate and effective population size</b><b> </b><b>of the model cooperative bacterium</b><b> </b><b><i>M</i></b><b><i>yxococcus xanthus</i></b>"To wok with the dataset, download the entire set of files and folders, and open script:WIELGOSS_GBE.RRunning this script in order should enable to follow all analyses in your current working directory.

description: Inference of the mutation rates and population size of bacterium <i>Myxococcus xanthus</i>. Dataset consists of: a) mutational count data from a mutation accumulation experiment with bacterium <i>Myxococcus xanthus</i>; b) the whole genome alignments of natural isolates to parse 4-fold degenerate sites to estimate neutral nucleotide diversity and effective population size, respectively.
DOI: 10.22000/1973
title: Dialectics of Climate Futures
title: Daten der Installation

description: "Dialectics of Climate Futures" ist im Rahmen des Masterstudiengangs Design & Computation entstanden. Die Installation verdeutlicht die verwobenen Zusammenhänge der Klimakrise und stößt zum Diskurs an. Die Methode der Dialektik ermöglicht, aus unseren gewohnten Denkmustern auszubrechen und uns konstruktiv mit möglicherweise unbequemen Gefühlsräumen auseinanderzusetzen. Der Datensatz beinhaltet die Ergebnisse der Interaktionen mit der Installation während zwei Veranstaltungen.
DOI: 10.23670/ecnms.2024.4.1.1
title: Параметры инновационной активности в России по итогам 2020-2022 гг

description: Cifra. Экономика, Выпуск 1 (4) 2024
DOI: 10.17031/64ca51d076c80
title: 2012 Marine Biological Association of the UK (MBA) Batten Bay Corella eumyota survey

description: Targeted search for the Orange-Tipped Sea Squirt Corella eumyota at Batten Bay. For each Corella eumyota found, the following observations were recorded: Length (mm), width (mm), aggregation size (number of individuals in aggregation). Photographs of some specimens were taken.
DOI: 10.57932/16ec87f0-b2db-42c6-bae5-8944c12f5d60
title: Streamflow monitoring at high temporal resolution based on non-contact instruments in the Galabre river (Southern pre-Alps, France)

description: We provide a dataset for calculating streamflow in a river of the Southern pre-Alps in France over the period October 2018 to May 2021. The river is called the Galabre and is a tributary of the Bès, which in turn is a tributary of the Bléone. The hydrometric station, so-called RIPLE, which incorporates non-contact instruments, was described in detail by Nord et al (2020). It was installed at a site subject to frequent bathymetric changes, 2.5 km downstream of a historic hydrometric station called « La Robine », at the "Galabre" site of the Draix-Bléone observatory (https://draixbleone.osug.fr/). The dataset combines high-frequency monitoring (every 10 minutes) of water level and surface water velocity using radar, ground-based bathymetric surveys, video sequences recorded by fixed camera with velocity fields obtained using the Fudaa-LSPIV software (https://forge.irstea.fr/projects/fudaa-lspiv), and the results of theoretical models of velocity field distribution in the river section.

Nord, G., Michielin, Y., Biron, R., Esteves, M., Freche, G., Geay, T., et al. (2020). An autonomous low-power instrument platform for monitoring water and solid discharges in mesoscale rivers. Geoscientific Instrumentation, Methods and Data Systems, 9(1), 41–67. https://doi.org/10.5194/gi-9-41-2020
DOI: 10.48597/cuun-gd74
title: Ozone at Monte Cimone

description: Measurement of Ozone at Monte Cimone
DOI: 10.48597/s7ku-2wwq
title: Measurement of Ozone at Monte Cimone

description: Measurement of Ozone at Monte Cimone
DOI: 10.48597/9vsd-426s
title: Measurement of Ozone at Monte Cimone

description: Measurement of Ozone at Monte Cimone
DOI: 10.48597/xvhq-x2yt
title: Ozone at Monte Cimone

description: Measurement of Ozone at Monte Cimone
DOI: 10.48597/syr4-snz2
title: Measurement of Ozone at Monte Cimone

description: Measurement of Ozone at Monte Cimone
DOI: 10.6084/m9.figshare.25416319
title: SUD raw data 2024.03.15

description: The transient receptor potential melastatin 7 channel (TRPM7) is a non-selected cation channel highly expressed in some human cancer tissues. TRPM7 is involved in the proliferation, migration, invasion, and epithelial-mesenchymal transition (EMT) of cancer cells. Modulation of TRPM7 could be a promising therapeutic strategy for treating cancer, however, efficient and selective pharmacological TRPM7 modulators are lacking. In this study we investigated N- [ 4- (4, 6- dimethyl- 2- pyrimidinyloxy) - 3- methylphenyl] -N' - [ 2 -(dimethylamino)] benzoylurea (SUD), a newly synthesized benzoylurea derivative, for its effects on cancer cell migration and EMT and on functional expression of TRPM7. Our previous studies showed that SUD induces cell cycle arrest and apoptosis of MCF-7 and BGC-823 cells (human breast cancer and gastric cancer cell lines, respectively). Here we show that SUD significantly decreased the migration of both types of cancer cells. Moreover, SUD decreased vimentin expression and increased E-cadherin expression in both cell types, indicating that EMT is also decreased by SUD. Importantly, SUD potetnly reduced the TRPM7 current in a concentration-dependent manner. Additionally, SUD also decreased TRPM7 expression through the PI3K/Akt signaling pathway. Finally, molecular docking simulations were used to investigate potential SUD binding site on TRPM7. In summary, our research demonstrated that SUD is an effective TRPM7 inhibitor and a potential agent to suppress the metastasis of breast and gastric cancer by inhibiting TRPM7 expression and function.
DOI: 10.6084/m9.figshare.25416319.v1
title: SUD raw data 2024.03.15

description: The transient receptor potential melastatin 7 channel (TRPM7) is a non-selected cation channel highly expressed in some human cancer tissues. TRPM7 is involved in the proliferation, migration, invasion, and epithelial-mesenchymal transition (EMT) of cancer cells. Modulation of TRPM7 could be a promising therapeutic strategy for treating cancer, however, efficient and selective pharmacological TRPM7 modulators are lacking. In this study we investigated N- [ 4- (4, 6- dimethyl- 2- pyrimidinyloxy) - 3- methylphenyl] -N' - [ 2 -(dimethylamino)] benzoylurea (SUD), a newly synthesized benzoylurea derivative, for its effects on cancer cell migration and EMT and on functional expression of TRPM7. Our previous studies showed that SUD induces cell cycle arrest and apoptosis of MCF-7 and BGC-823 cells (human breast cancer and gastric cancer cell lines, respectively). Here we show that SUD significantly decreased the migration of both types of cancer cells. Moreover, SUD decreased vimentin expression and increased E-cadherin expression in both cell types, indicating that EMT is also decreased by SUD. Importantly, SUD potetnly reduced the TRPM7 current in a concentration-dependent manner. Additionally, SUD also decreased TRPM7 expression through the PI3K/Akt signaling pathway. Finally, molecular docking simulations were used to investigate potential SUD binding site on TRPM7. In summary, our research demonstrated that SUD is an effective TRPM7 inhibitor and a potential agent to suppress the metastasis of breast and gastric cancer by inhibiting TRPM7 expression and function.
DOI: 10.6084/m9.figshare.20134181
title: Data from 'Surface temperatures are influenced by handling stress independently of corticosterone levels in wild king penguins (<i>Aptenodytes patagonicus</i>)'

description: Excel file with 4 datasheets:Adult surface temperaturesChick surface temperaturesEgg surface temperaturePlasma CORT levels
DOI: 10.6084/m9.figshare.20134181.v1
title: Data from 'Surface temperatures are influenced by handling stress independently of corticosterone levels in wild king penguins (<i>Aptenodytes patagonicus</i>)'

description: Excel file with 4 datasheets:Adult surface temperaturesChick surface temperaturesEgg surface temperaturePlasma CORT levels
DOI: 10.6084/m9.figshare.25391071.v1
title: Data Set and Code Book cement dust.

description: Exposure to cement dust poses significant risks to respiratory health, particularly among occupational workers. However, the impact of non-occupational cement dust exposure on nearby residents' pulmonary well-being is often overlooked, particularly in the context of India. This study explores chronic respiratory health symptoms and their predictors in residents exposed to cement dust within a 1 km radius of a cement factory, comparing them with residents residing 5 kms away from the plant.
DOI: 10.5522/04/25276747
title: Bergmann’s Rule in Alien Birds

description: Data for associated paper.
DOI: 10.5522/04/25276747.v1
title: Bergmann’s Rule in Alien Birds

description: Data for associated paper.
DOI: 10.48597/f8ce-btdg
title: Ozone at Capo Granitola

description: Measurement of Ozone at Capo Granitola
DOI: 10.48597/5aw4-tbk6
title: Measurement of Ozone at Capo Granitola

description: Measurement of Ozone at Capo Granitola
DOI: 10.48597/gjd2-x6tf
title: Measurement of Ozone at Capo Granitola

description: Measurement of Ozone at Capo Granitola
DOI: 10.5281/zenodo.7848662
title: Supplementary material of the article "Nitrogen status estimation of durum wheat derived from Sentinel-2 satellite data in Central Italy"

description: Table S1 Field_data: dataset of winter wheat biophysical parameters (LAI, LCC and leaf N concentration), measured in the field Table S2 CI_CCC: Relationship between Chlorophyll indeces and Canopy Chlorophyll Content Table S3 NA_NC_NNI; results of calculations aimed at monitoring the evolution of the NNI, under different N management and meteorological condition.
DOI: 10.34740/kaggle/dsv/7851708
title: 2021 World Population (updated daily)
DOI: 10.34740/kaggle/dsv/7851738
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.25145528
title: <b>Combinatorial interpretation of BMP and WNT controls the decision between primitive streak and extraembryonic fates in human pluripotent stem cells</b>

description: Raw data and source data for figures in publication: "<b>Combinatorial interpretation of BMP and WNT controls the decision between primitive streak and extraembryonic fates in human pluripotent stem cells</b>"Elena Camacho-Aguilar<sup>1‡*</sup>, Sumin Yoon<sup>1</sup>, Miguel A. Ortiz-Salazar<sup>1</sup>, Siqi Du<sup>1</sup>, M. Cecilia Guerra<sup>1</sup>, Aryeh Warmflash<sup>1,2*</sup><sup>#</sup><br><sup>1</sup>Department of Biosciences and <sup>2</sup>Department of Bioengineering, Rice University, Houston TX 77005<sup><strong>‡</strong></sup>Present address: Department of Gene Regulation and Morphogenesis, CABD (Andalusian Centre for Developmental Biology), CSIC-Universidad Pablo de Olavide-Junta de Andalucía, Campus UPO, Spain*Corresponding authors<sup><strong>#</strong></sup>Lead contact
DOI: 10.6084/m9.figshare.25416505
title: Pisapia et al Chapter 15 data for ANOVA.xlsx

description: Data extracted from published studies was used to test for potential differences among methodological approaches (census versus hydochemical approaches). This is part of Chapter 15 of the Routledge Handbook of Coral Reefs.
DOI: 10.6084/m9.figshare.25416505.v1
title: Pisapia et al Chapter 15 data for ANOVA.xlsx

description: Data extracted from published studies was used to test for potential differences among methodological approaches (census versus hydochemical approaches). This is part of Chapter 15 of the Routledge Handbook of Coral Reefs.
DOI: 10.25345/c5dj58t4n
title: MassIVE MSV000094325 - Mass Spectometry Analysis of Inhibition of SOD2-mediated protein degradation
title: Peptide samples were analysed by a shot-gun approach as described recently (Stieglitz et al., 2022). Raw MS data were processed using Max Quant (version 2.0, Cox and Mann 2008), Perseus software (version 2.0.6.0)(Tyanova et al.,2016), and human entries of uniprot DB. Proteins were stated identified by a false discovery rate of 0.01 on protein and peptide level.
DOI: 10.25403/upresearchdata.25407928
title: Genetic basis of drug resistance in Mycobacterium tuberculosis

description: This dataset consists of files and figures that were used to investigate the genetic basis of drug resistance in Mycobacterium tuberculosis (Mtb). Files Lineage 1.txt - Lineage 6.txt describes the most discriminative polymorphisms needed to differentiate between susceptible and resistant strains. Files Lineage_1_df.txt - Lineage_6_df.txt show all epistatic interactions that exist between the most discriminative polymorphisms. These files also provide the results of the statistical analysis done to ensure that indeed these polymorphisms were epistatically linked. The figures show a network of epistatic interactions that have established evolutionary trajectories towards drug resistance. Common_polymorphisms.v5 shows pseudo sequences of amino acids that were identified among the polymorphisms.Common_polymorphisms.v5_annotation.out shows all the annotated polymorphisms found in Mtb strains. The files_metadata file shows all the drug susceptibility profiles of all Mtb strains included for analysis. Lastly, the universal_AMR_markers show all the markers/indicators of drug resistance to more than three antibiotics.
DOI: 10.25403/upresearchdata.25407928.v1
title: Genetic basis of drug resistance in Mycobacterium tuberculosis

description: This dataset consists of files and figures that were used to investigate the genetic basis of drug resistance in Mycobacterium tuberculosis (Mtb). Files Lineage 1.txt - Lineage 6.txt describes the most discriminative polymorphisms needed to differentiate between susceptible and resistant strains. Files Lineage_1_df.txt - Lineage_6_df.txt show all epistatic interactions that exist between the most discriminative polymorphisms. These files also provide the results of the statistical analysis done to ensure that indeed these polymorphisms were epistatically linked. The figures show a network of epistatic interactions that have established evolutionary trajectories towards drug resistance. Common_polymorphisms.v5 shows pseudo sequences of amino acids that were identified among the polymorphisms.Common_polymorphisms.v5_annotation.out shows all the annotated polymorphisms found in Mtb strains. The files_metadata file shows all the drug susceptibility profiles of all Mtb strains included for analysis. Lastly, the universal_AMR_markers show all the markers/indicators of drug resistance to more than three antibiotics.