cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25632352.v1
title: Mitochondrial reactive oxygen species impact human fibroblast responses to protracted γ-ray exposures

description: <b>Purpose:</b> Continuous exposure to ionizing radiation at a low dose rate poses significant health risks to humans on deep space missions, prompting the need for mechanistic studies to identify countermeasures against its deleterious effects. Mitochondria are a major subcellular locus of radiogenic injury, and may trigger secondary cellular responses through the production of reactive oxygen species (mtROS) with broader biological implications. <b>Methods and Materials:</b> To determine the contribution of mtROS to radiation-induced cellular responses, we investigated the impacts of protracted γ-ray exposures (IR; 1.1 Gy delivered at 0.16 mGy/min continuously over 5 days) on mitochondrial function, gene expression, and the protein secretome of human HCA2-hTERT fibroblasts in the presence and absence of a mitochondria-specific antioxidant mitoTEMPO (MT; 5 µM). <b>Results:</b> IR increased fibroblast mitochondrial oxygen consumption (<i>J</i>O<sub>2</sub>) and H<sub>2</sub>O<sub>2</sub> release rates (<i>J</i>H<sub>2</sub>O<sub>2</sub>) under energized conditions, which corresponded to higher protein expression of NADPH Oxidase (NOX) 1, NOX4, and nuclear DNA-encoded subunits of respiratory chain Complexes I and III, but depleted mtDNA transcripts encoding subunits of the same complexes. This was associated with activation of gene programs related to DNA repair, oxidative stress, and protein ubiquination, all of which were attenuated by MT treatment along with radiation-induced increases in <i>J</i>O<sub>2</sub> and <i>J</i>H<sub>2</sub>O<sub>2</sub>. IR also increased secreted levels of interleukin-8 and Type I collagens, while decreasing Type VI collagens and enzymes that coordinate assembly and remodeling of the extracellular matrix. MT treatment attenuated many of these effects while augmenting others, revealing complex effects of mtROS in fibroblast responses to IR. <b>Conclusion:</b> These results implicate mtROS production in fibroblast responses to protracted radiation exposure, and suggest potentially protective effects of mitochondrial-targeted antioxidants against radiogenic tissue injury in vivo.
DOI: 10.6084/m9.figshare.25482993.v1
title: How does ionizing radiation affect amyloidogenesis in plants?

description: Ionizing radiation is a harsh environmental factor that could induce plant senescence. We hypothesized that radiation-related senescence remodels proteome, particularly by triggering the accumulation of prion-like proteins in plant tissues. The object of this study, pea (<i>Pisum sativum</i> L.), is an agriculturally important legume. Research on the functional importance of amyloidogenic proteins was never performed on this species. Pea seeds were irradiated in the dose range 5–50 Gy of X-rays. Afterward, Fourier-transform infrared spectroscopy (FTIR) was used to investigate changes in the secondary structure of proteins in germinated 3-day-old seedlings. Specifically, we evaluated the ratio between the amide I and II peaks. Next, we performed protein staining with Congo red to compare the presence of amyloids in the samples. In parallel, we profiled the detergent-resistant proteome fraction by ultrahigh-performance liquid chromatography coupled with tandem mass spectrometry (UHPLC-MS). Differentially accumulated proteins were functionally analyzed in MapMan software, and the PLAAC tool was used to predict putative prion-like proteins. We showed a reduced germination rate but higher plant height and faster appearance of reproductive organs in the irradiated at dose of 50 Gy group compared with the control; furthermore, we demonstrated more β-sheets and amyloid aggregates in the roots of stressed plants. We detected 531 proteins in detergent-resistant fraction extracted from roots, and 45 were annotated as putative prion-like proteins. Notably, 29 proteins were significantly differentially abundant between the irradiated and the control groups. These proteins belong to several functional categories: amino acid metabolism, carbohydrate metabolism, cytoskeleton organization, regulatory processes, protein biosynthesis, and RNA processing. Thus, the discovery proteomics provided deep data on novel aspects of plant stress biology. Our data hinted that protein accumulation stimulated seedlings’ growth as well as accelerated ontogenesis and, eventually, senescence, primarily through translation and RNA processing. The increased abundance of primary metabolism-related proteins indicates more intensive metabolic processes triggered in germinating pea seeds upon X-ray exposure. The functional role of detected putative amyloidogenic proteins should be validated in overexpression or knockout follow-up studies.
DOI: 10.6084/m9.figshare.25665012
title: Effect of changing the radiation dose range on the in vitro cytogenetic dose response to gamma-rays

description: To examine the distortion of the linear quadratic (LQ) model of in vitro cytogenetic dose response over an extended range of γ-ray doses by analyzing the available literature data, and to establish the dose ranges, in which the LQ dose response curve (DRC) can be most accurately fitted for biological dosimetry. Data on yields of dicentrics (Dic) or dicentrics plus centric rings (Dic + CR) induced in vitro in human lymphocytes by acute γ-rays were extracted from 108 open sources. The overall dose response dataset in the dose range up to 50 Gy was fitted to a fractional-rational (FR) model, which included a ‘basic’ LQ function in the numerator, and a reduction factor dependent on the square of the dose in the denominator. Cytogenetic dose response data obtained at Grigoriev Institute for Medical Radiology, Kharkiv, Ukraine (GIMRO) in the range 0.1 − 20.3 Gy acute γ-rays were fitted to the LQ model with the progressive changing minimum or maximum radiation dose. The overall dose response, as expected, followed the LQ function in the dose range ≤5 Gy, but in the extended dose range appeared to be S-shaped, with intensive saturation and a plateau at doses ≥22 Gy. Coefficients of the ‘basic’ LQ equation in FR model were very close to many published DRCs; calculated asymptote was 17. Fitting of the GIMRO dataset to the LQ model with the shift of the dose range showed the increase in linear coefficient with the increment of either minimum or maximum radiation dose, while the decline of the quadratic coefficient was regulated mostly by the increase of the highest dose. The best goodness of fit, assessed by lower χ<sup>2</sup> values, occurred for dose ranges 0.1 − 1.0 Gy; 0.5 − 5.9 Gy; 1.0 − 7.8 Gy; 2.0 − 9.6 Gy, 3.9 − 16.4 Gy and 5.9 − 20.3 Gy. The ‘see-saw’ effect in changes of LQ coefficients was confirmed by re-fitting datasets published by other laboratories. The classical LQ model with fixed coefficients appears to have limited applicability for cytogenetic dosimetry at radiation doses &gt;5 Gy due to the saturation of the dose response. Different response of the LQ coefficients to the changes of the dose range must be considered during the DRC construction. Proper selection of minimum and maximum dose in calibration experiments makes it possible to improve the goodness of fit of the LQ DRC.
DOI: 10.6084/m9.figshare.25665012.v1
title: Effect of changing the radiation dose range on the in vitro cytogenetic dose response to gamma-rays

description: To examine the distortion of the linear quadratic (LQ) model of in vitro cytogenetic dose response over an extended range of γ-ray doses by analyzing the available literature data, and to establish the dose ranges, in which the LQ dose response curve (DRC) can be most accurately fitted for biological dosimetry. Data on yields of dicentrics (Dic) or dicentrics plus centric rings (Dic + CR) induced in vitro in human lymphocytes by acute γ-rays were extracted from 108 open sources. The overall dose response dataset in the dose range up to 50 Gy was fitted to a fractional-rational (FR) model, which included a ‘basic’ LQ function in the numerator, and a reduction factor dependent on the square of the dose in the denominator. Cytogenetic dose response data obtained at Grigoriev Institute for Medical Radiology, Kharkiv, Ukraine (GIMRO) in the range 0.1 − 20.3 Gy acute γ-rays were fitted to the LQ model with the progressive changing minimum or maximum radiation dose. The overall dose response, as expected, followed the LQ function in the dose range ≤5 Gy, but in the extended dose range appeared to be S-shaped, with intensive saturation and a plateau at doses ≥22 Gy. Coefficients of the ‘basic’ LQ equation in FR model were very close to many published DRCs; calculated asymptote was 17. Fitting of the GIMRO dataset to the LQ model with the shift of the dose range showed the increase in linear coefficient with the increment of either minimum or maximum radiation dose, while the decline of the quadratic coefficient was regulated mostly by the increase of the highest dose. The best goodness of fit, assessed by lower χ<sup>2</sup> values, occurred for dose ranges 0.1 − 1.0 Gy; 0.5 − 5.9 Gy; 1.0 − 7.8 Gy; 2.0 − 9.6 Gy, 3.9 − 16.4 Gy and 5.9 − 20.3 Gy. The ‘see-saw’ effect in changes of LQ coefficients was confirmed by re-fitting datasets published by other laboratories. The classical LQ model with fixed coefficients appears to have limited applicability for cytogenetic dosimetry at radiation doses &gt;5 Gy due to the saturation of the dose response. Different response of the LQ coefficients to the changes of the dose range must be considered during the DRC construction. Proper selection of minimum and maximum dose in calibration experiments makes it possible to improve the goodness of fit of the LQ DRC.
DOI: 10.6084/m9.figshare.29437452
title: Spinal epidural electrical stimulation for the recovery of motor function in lower limbs after spinal cord injury: A pilot study

description: Single-arm prospective pilot study. To assess the safety and efficacy of sEES in the recovery of motor function after severe SCI in the Indian population and to evaluate the feasibility of a larger study. Standing and walking are highly desirable goals for persons with spinal cord injury (SCI). Activity-based locomotor training is the only available practice to enhance recovery at present. However, it does not yield significant outcomes in individuals with severe spinal cord injury. In recent years, Spinal epidural electrical stimulation (sEES) has been reported to produce rhythmic motor activity in limbs in a few case reports and also in clinical trials in animals and more recently, in a few human case reports. We conducted a single-arm prospective pilot study at a tertiary care spine surgery center in five subjects with chronic spinal cord injury with an absence of useful power in lower limbs and satisfying the eligibility criteria. The Institute Ethics Committee and the Research Review Committee approved the study and it was registered with the Clinical Trials Registry of India. No intraoperative or early postoperative complications were noted in any of the subjects. Two subjects had wound complications at 1 and 3 months, respectively and were managed successfully. All of these participants were unable to stand, step, or walk without assistance before the recruitment. With epidural stimulation, four subjects gained better control of standing full weight bearing (without assistance). Four (80%) subjects were able to coordinate stepping on a treadmill and three (60%) were able to walk without knee braces with epidural stimulation. Objective functional outcome measures such as the Walking Index of spinal cord injury and Spinal Cord Independence Measure showed significant improvement (P = 0.004 and 0.002, respectively) with sEES. The trial could be implemented successfully, <i>i.e.</i> the desired recruitment could be achieved within a defined period, with procedural adherence and participant compliance. sEES is a safe intervention. Locomotor training with sEES improves the motor abilities and functional recovery of persons with chronic SCI. A larger prospective study with more subjects needs to be done to draw a definite conclusion and seems to be feasible using the protocol, outcome measures, and recruitment strategy of the pilot study.
DOI: 10.6084/m9.figshare.29437452.v1
title: Spinal epidural electrical stimulation for the recovery of motor function in lower limbs after spinal cord injury: A pilot study

description: Single-arm prospective pilot study. To assess the safety and efficacy of sEES in the recovery of motor function after severe SCI in the Indian population and to evaluate the feasibility of a larger study. Standing and walking are highly desirable goals for persons with spinal cord injury (SCI). Activity-based locomotor training is the only available practice to enhance recovery at present. However, it does not yield significant outcomes in individuals with severe spinal cord injury. In recent years, Spinal epidural electrical stimulation (sEES) has been reported to produce rhythmic motor activity in limbs in a few case reports and also in clinical trials in animals and more recently, in a few human case reports. We conducted a single-arm prospective pilot study at a tertiary care spine surgery center in five subjects with chronic spinal cord injury with an absence of useful power in lower limbs and satisfying the eligibility criteria. The Institute Ethics Committee and the Research Review Committee approved the study and it was registered with the Clinical Trials Registry of India. No intraoperative or early postoperative complications were noted in any of the subjects. Two subjects had wound complications at 1 and 3 months, respectively and were managed successfully. All of these participants were unable to stand, step, or walk without assistance before the recruitment. With epidural stimulation, four subjects gained better control of standing full weight bearing (without assistance). Four (80%) subjects were able to coordinate stepping on a treadmill and three (60%) were able to walk without knee braces with epidural stimulation. Objective functional outcome measures such as the Walking Index of spinal cord injury and Spinal Cord Independence Measure showed significant improvement (P = 0.004 and 0.002, respectively) with sEES. The trial could be implemented successfully, <i>i.e.</i> the desired recruitment could be achieved within a defined period, with procedural adherence and participant compliance. sEES is a safe intervention. Locomotor training with sEES improves the motor abilities and functional recovery of persons with chronic SCI. A larger prospective study with more subjects needs to be done to draw a definite conclusion and seems to be feasible using the protocol, outcome measures, and recruitment strategy of the pilot study.
DOI: 10.15468/dl.ucwkub
title: Occurrence Download

description: A dataset containing 607 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melissa officinalis L.",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 607 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081009-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tn4rrz
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melissa officinalis L.",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 104 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081008-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25966645.v1
title: Annotation files of five sea anemones (<i>Actinoscyphia liui</i>, <i>Diadumene lineata</i>, <i>Anthopleura sola</i>, <i>Telmatactis stephensoni </i>and <i>Actinia tenebrosa</i>)

description: Annotation files of five sea anemones (<i>Actinoscyphia liui</i>, <i>Diadumene lineata</i>, <i>Anthopleura sola</i>, <i>Telmatactis stephensoni </i>and <i>Actinia tenebrosa</i>)
DOI: 10.15468/dl.4mr9et
title: Occurrence Download

description: A dataset containing 1537 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Brunei Darussalam",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dipterocarpaceae"
 ]
}

 The dataset includes 1537 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081010-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tc4dah
title: Occurrence Download

description: A dataset containing 2488 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Lophoceros hemprichii (Ehrenberg, 1833)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 2488 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081013-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rde84w
title: Occurrence Download

description: A dataset containing 7747 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melissa officinalis L.",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7747 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081018-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ncr5b
title: Occurrence Download

description: A dataset containing 4621 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((2.54506 41.93126,2.65185 41.93126,2.65185 41.997,2.54506 41.997,2.54506 41.93126))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2018-2025"
 ]
}

 The dataset includes 4621 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081016-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a6ztj7
title: Occurrence Download

description: A dataset containing 326 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "DatasetKey is Global compendium of Aedes albopictus occurrence",
 "Year 1441-2025"
 ]
}

 The dataset includes 326 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081021-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ksrcft
title: Occurrence Download

description: A dataset containing 34195 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Survey and monitoring records for Scottish Wildlife Trust reserves from reserve convenors and Trust volunteers - Verified data"
 ]
}

 The dataset includes 34195 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081017-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48432/jixsgj
title: Changes in the morphology of castor seeds after selection for fast germination

description: This dataset was measured in castor seeds that were produced by plants that were subjected to three cycles of selection of fast germination. Data was taken on seed weight, length, width, and height, seed coat weight, and caruncle weight. Calculations were made to obtain the values of relative weight for seed, seed coat, and caruncle, seed area, volume, and density, and seed coat density. Additional experimental details and the analysis of the data can be accessed in the published article.
DOI: 10.6084/m9.figshare.29323868.v2
title: dcxvcghchkgcghkfhkdfgy

description: khtdkhgxckdkygdkghdghdhkgdghkd
DOI: 10.15468/dl.unq2en
title: Occurrence Download

description: A dataset containing 633 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Records of otters from Site Condition Monitoring in Scotland 2011-2012"
 ]
}

 The dataset includes 633 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081024-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15774952
title: Rééducation dark
DOI: 10.5281/zenodo.15774953
title: Rééducation dark
DOI: 10.6084/m9.figshare.25966645.v2
title: Annotation files of five sea anemones (<i>Actinoscyphia liui</i>, <i>Diadumene lineata</i>, <i>Anthopleura sola</i>, <i>Telmatactis stephensoni </i>and <i>Actinia tenebrosa</i>)

description: Annotation files of five sea anemones (<i>Actinoscyphia liui</i>, <i>Diadumene lineata</i>, <i>Anthopleura sola</i>, <i>Telmatactis stephensoni </i>and <i>Actinia tenebrosa</i>)
DOI: 10.15468/dl.tta5fv
title: Occurrence Download

description: A dataset containing 14907 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((4.55201 44.11022,4.68506 44.11385,4.72682 44.20379,4.56992 44.21715,4.55201 44.11022))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2015-2025"
 ]
}

 The dataset includes 14907 records from 135 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081027-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15774836
title: Table 1 in A review of the South-East Asian Nasutitermitinae (Isoptera: Termidae), with descriptions of one new genus and a new species and including a key to the genera

description: Table 1.
Head lengthHead widthNasutitermes matangensisParatype BMNH 3581.91–2.071.39–1.50Det. Holmgren BMNH 1899-411.93–1.951.33–1.47Ahmad (1958)1.95– 2.091.24–1.37Thapa (1981)1.95– 2.051.27–1.42Thakur and Thakur (1992) Ex. Panjang, Krakatau Island1.75– 2.00 1.69–1.81N / A 1.12–1.87Ex. Rakata, Krakatau Island1.71–1.791.2 –1.26Nasutitermes matangensiformisHolmgren (1913)1.671.1Ahmad (1958)1.67– 1.741.04–1.11Ahmad (1965)1.61– 1.891.04–1.27Thapa (1981)1.61– 1.771.02–1.05Coll Light1.59–1.691.06–1.09BM 1965-1521.78–1.891.05–1.15
description: Published as part of Gathorne-Hardy, Frederick, 2001, A review of the South-East Asian Nasutitermitinae (Isoptera: Termidae), with descriptions of one new genus and a new species and including a key to the genera, pp. 1489 in Journal of Natural History 35 (10) on page 1489, DOI: 10.1080/00220930010001497, http://zenodo.org/record/10083261