cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7108496
title: Data - Attack of the clones: population genetics reveals clonality of Colletotrichum lupini, the causal agent of lupin anthracnose

description: <em>Colletotrichum lupini</em>, causing lupin anthracnose, is one of the worst pathogens to lupin cultivation worldwide. Understanding its population structure and evolutionary potential is crucial to design successful disease management strategies. The objective of this study was to employ population genetics to investigate the genetic diversity, evolutionary dynamics and molecular basis of host-speciation of this notorious lupin pathogen. A collection of globally representative <em>C. lupini </em>isolates was genotyped through triple digest restriction-site associated DNA sequencing (3D-RADseq), resulting in a dataset of unparalleled resolution. Phylogenetic and structural analysis could distinguish four (I – IV) independent lineages. The strong population structure, low recombination rate and slow linkage decay strongly indicate that <em>C. lupini</em> reproduces clonally. Different morphologies and virulence patterns on white and Andean lupin were observed between and within clonal lineages. Lineage II isolates were shown to have a mini chromosome which was also partly present in lineage III and IV, but not in lineage I isolates. Variation in the presence of this mini-chromosome could indicate a function related to virulence or host-speciation. All four lineages were present in the South American Andes region, which is concluded to be the center of origin of this species. Only members of lineage II have been found outside South America since the 1990s, indicating it as the current pandemic population. As a seed-borne pathogen, <em>C. lupini</em> has mainly spread through infected but symptomless seeds, stressing the importance of phytosanitary measures to prevent future outbreaks of strains that are yet confined to South America.
DOI: 10.5281/zenodo.7108495
title: Data - Attack of the clones: population genetics reveals clonality of Colletotrichum lupini, the causal agent of lupin anthracnose

description: <em>Colletotrichum lupini</em>, causing lupin anthracnose, is one of the worst pathogens to lupin cultivation worldwide. Understanding its population structure and evolutionary potential is crucial to design successful disease management strategies. The objective of this study was to employ population genetics to investigate the genetic diversity, evolutionary dynamics and molecular basis of host-speciation of this notorious lupin pathogen. A collection of globally representative <em>C. lupini </em>isolates was genotyped through triple digest restriction-site associated DNA sequencing (3D-RADseq), resulting in a dataset of unparalleled resolution. Phylogenetic and structural analysis could distinguish four (I – IV) independent lineages. The strong population structure, low recombination rate and slow linkage decay strongly indicate that <em>C. lupini</em> reproduces clonally. Different morphologies and virulence patterns on white and Andean lupin were observed between and within clonal lineages. Lineage II isolates were shown to have a mini chromosome which was also partly present in lineage III and IV, but not in lineage I isolates. Variation in the presence of this mini-chromosome could indicate a function related to virulence or host-speciation. All four lineages were present in the South American Andes region, which is concluded to be the center of origin of this species. Only members of lineage II have been found outside South America since the 1990s, indicating it as the current pandemic population. As a seed-borne pathogen, <em>C. lupini</em> has mainly spread through infected but symptomless seeds, stressing the importance of phytosanitary measures to prevent future outbreaks of strains that are yet confined to South America.
DOI: 10.21227/nqns-3b65
title: A novel partially interleaved structure for planar transformer

description: The PCB files of the partially interleaved structure with low leakage inductance.
DOI: 10.14459/2021mp1633795
title: <b>So2Sat POP Part 2</b>

description: A comprehensive data set for population estimation in 106 European cities. The final data set consists of two parts: So2Sat POP Part 1 and So2Sat POP Part 2. So2Sat POP Part 1 comprises local climate zone, land use classifications, nighttime lights in combination with multi-spectral Sentinel-2 imagery, and data from the Open Street Map initiative. So2Sat POP Part 2 consists of digital elevation model.
DOI: 10.5517/ccdc.csd.cc23rx0t
title: CCDC 1959386: Experimental Crystal Structure Determination

description: Related Article: Pavel S. Silaichev,  Tetyana Beryozkina,  Mikhail S. Novikov,  Wim Dehaen,  Vasiliy A. Bakulev|2020|Eur.J.Org.Chem.|2020|3688|doi:10.1002/ejoc.202000453
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c33by
title: CCDC 2177729: Experimental Crystal Structure Determination

description: Related Article: Chuanying Shen|2022|CSD Communication|||
description: Related Article: Chuanying Shen, Defu Sun, Yangyang Dang, Kui Wu, Tianxiang Xu, Ruoxian Hou, Hanzhang Chen, Jiyang Wang, Duanliang Wang|2022|Inorg.Chem.|61|16936|doi:10.1021/acs.inorgchem.2c03042
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c33cz
title: CCDC 2177730: Experimental Crystal Structure Determination

description: Related Article: Chuanying Shen, Defu Sun, Yangyang Dang, Kui Wu, Tianxiang Xu, Ruoxian Hou, Hanzhang Chen, Jiyang Wang, Duanliang Wang|2022|Inorg.Chem.|61|16936|doi:10.1021/acs.inorgchem.2c03042
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c4zvc
title: CCDC 2179543: Experimental Crystal Structure Determination

description: Related Article: Gaurav Shukla, Keshav Raghuvanshi, Maya Shankar Singh|2022|J.Org.Chem.|87|13935|doi:10.1021/acs.joc.2c01617
description: Related Article: Gaurav Shukla|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c6t3j
title: CCDC 2181287: Experimental Crystal Structure Determination

description: Related Article: Helle H. Trinderup, Line Juul-Madsen, Laura Press, Michael Madsen, Henrik H. Jensen|2022|J.Org.Chem.|87|13763|doi:10.1021/acs.joc.2c01475
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cj88g
title: CCDC 2190375: Experimental Crystal Structure Determination

description: Related Article: Christopher M. Caroff, Gregory S. Girolami|2022|Inorg.Chem.|61|16740|doi:10.1021/acs.inorgchem.2c02545
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cj89h
title: CCDC 2190376: Experimental Crystal Structure Determination

description: Related Article: Christopher M. Caroff, Gregory S. Girolami|2022|Inorg.Chem.|61|16740|doi:10.1021/acs.inorgchem.2c02545
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cj8bj
title: CCDC 2190377: Experimental Crystal Structure Determination

description: Related Article: Christopher M. Caroff, Gregory S. Girolami|2022|Inorg.Chem.|61|16740|doi:10.1021/acs.inorgchem.2c02545
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21510000
title: data availability .xlsx

description: Leptin is an adipokine, involved in the regulation of energy balance and immune function. Peripheral administration of leptin has been demonstrated to elicit a prostaglandin E2-dependent fever in rats. Previous studies have reported that nitric oxide, produced by neuronal nitric oxide synthase (nNOS) and inducible nitric oxide synthase (iNOS), and hydrogen sulfide, produced by cystathionine γ-lyase (CSE), play an important role for the induction of fever to lipopolysaccharide. To investigate the role of nNOS, iNOS and CSE in the effect of leptin on body temperature (Tb), we used the selective nNOS inhibitor 7-nitroindazole (7-NI), the selective iNOS inhibitor aminoguanidine (AG) and the CSE inhibitor dl-propargylglycine (PAG). The results of the first series of experiments demonstrated that intraperitoneal (i.p.) administration of leptin (0.5 mg/kg) induced a significant increase in Tb, whereas i.p. administration of AG (50 mg/kg), 7-NI (10 mg/kg) or PAG (50 mg/kg) did not induce any changes in Tb of rats. In the second series of experiments, we found that i.p. administration of AG, 7-NI or PAG 10 min before leptin abolished the increase in Tb, elicited by leptin. These results suggest the involvement of iNOS, nNOS and CSE in leptin-induced febrile response. In this study, we also investigated the interaction between leptin and each of the inhibitors through an examination of their effect on food consumption and body weight gain following their coadministration. We showed that leptin, AG, 7-NI and PAG, administered alone, suppressed food intake and body weight gain in rats at 24 h after the injection. Coadministration of leptin with AG, 7-NI or PAG did not produce any additive or synergistic effects on food intake and body weight.
DOI: 10.6084/m9.figshare.21510000.v2
title: data availability .xlsx

description: Leptin is an adipokine, involved in the regulation of energy balance and immune function. Peripheral administration of leptin has been demonstrated to elicit a prostaglandin E2-dependent fever in rats. Previous studies have reported that nitric oxide, produced by neuronal nitric oxide synthase (nNOS) and inducible nitric oxide synthase (iNOS), and hydrogen sulfide, produced by cystathionine γ-lyase (CSE), play an important role for the induction of fever to lipopolysaccharide. To investigate the role of nNOS, iNOS and CSE in the effect of leptin on body temperature (Tb), we used the selective nNOS inhibitor 7-nitroindazole (7-NI), the selective iNOS inhibitor aminoguanidine (AG) and the CSE inhibitor dl-propargylglycine (PAG). The results of the first series of experiments demonstrated that intraperitoneal (i.p.) administration of leptin (0.5 mg/kg) induced a significant increase in Tb, whereas i.p. administration of AG (50 mg/kg), 7-NI (10 mg/kg) or PAG (50 mg/kg) did not induce any changes in Tb of rats. In the second series of experiments, we found that i.p. administration of AG, 7-NI or PAG 10 min before leptin abolished the increase in Tb, elicited by leptin. These results suggest the involvement of iNOS, nNOS and CSE in leptin-induced febrile response. In this study, we also investigated the interaction between leptin and each of the inhibitors through an examination of their effect on food consumption and body weight gain following their coadministration. We showed that leptin, AG, 7-NI and PAG, administered alone, suppressed food intake and body weight gain in rats at 24 h after the injection. Coadministration of leptin with AG, 7-NI or PAG did not produce any additive or synergistic effects on food intake and body weight.
DOI: 10.6084/m9.figshare.21510000.v1
title: data availability .xlsx

description: Leptin is an adipokine, involved in the regulation of energy balance and immune function. Peripheral administration of leptin has been demonstrated to elicit a prostaglandin E2-dependent fever in rats. Previous studies have reported that nitric oxide, produced by neuronal nitric oxide synthase (nNOS) and inducible nitric oxide synthase (iNOS), and hydrogen sulfide, produced by cystathionine γ-lyase (CSE), play an important role for the induction of fever to lipopolysaccharide. To investigate the role of nNOS, iNOS, and CSE in the effect of leptin on body temperature (Tb), we used the selective nNOS inhibitor 7-nitroindazole (7-NI), the selective iNOS inhibitor aminoguanidine (AG) and the CSE inhibitor dl-propargylglycine (PAG). The results of the first series of experiments demonstrated that intraperitoneal (i.p.) administration of leptin (0.5 mg/kg) induced a significant increase in Tb, whereas i.p. administration of AG (50 mg/kg), 7-NI (10 mg/kg) or PAG (50 mg/kg) did not induce any changes in Tb of rats. In the second series of experiments, we found that i.p. administration of AG, 7- NI or PAG 10 min before leptin abolished the increase in Tb, elicited by leptin. These results suggest the involvement of iNOS, nNOS and CSE in leptin-induced febrile response. In this study, we also investigated the interaction between leptin and each of the inhibitors through an examination of their effect on food consumption and body weight gain following their coadministration. We showed that leptin, AG, 7-NI and PAG, administered alone, suppressed food intake and body weight gain in rats at 24 h after the injection. Coadministration of leptin with AG, 7-NI or PAG did not produce any additive or synergistic effects on food intake and body weight.
DOI: 10.6084/m9.figshare.21510009.v1
title: Protoarray-ATS_110525.xlsx

description: <em>ProtoArray® screening.</em> The initial screening was performed using ProtoArray® Human Protein Microarrays v.4.0 (Thermo Fisher Scientific, Waltham, MA, USA), which are loaded with 9480 proteins, as described previously (1). A total of 20 serum samples (10 each from HDs and patients with atherosclerosis) were used to select antigenic proteins specifically recognized by serum immunoglobin G (IgG) antibodies. The results were analyzed using Prospector (Thermo Fisher Scientific) software based on M-statistics. When comparing the two groups, a positive cutoff value was calculated for each protein using M-statistics. The percentage of the samples in each group that showed an immune response above the cutoff value was determined and the P-value for the significance of the difference between the two groups was calculated, as previously described (2). Ref. 1. Hamanaka S, Nakagawa T, Hiwasa T, Ohta Y, Kasamatsu S, Ishigami H, Taida T, Okimoto K, Saito K, Maruoka D, et al.: Investigation of novel biomarkers for predicting the clinical course in patients with ulcerative colitis. J Gastroenterol Hepatol 33: 1975-1983, 2018. doi: 10.1111/jgh.14297. PMID:29869393 <br> Ref. 2. Vermeulen N, de Béeck KO, Vermeire S, Van Steen K, Michiels G, Ballet V, Rutgeerts P and Bossuyt X: Identification of a novel autoantigen in inflammatory bowel disease by protein microarray. Inflamm Bowel Dis 17: 1291-1300, 2011. doi: 10.1002/ibd.21508. PMID:21560193
DOI: 10.6084/m9.figshare.21507189.v2
title: GAN2000 - MODEL WEIGHTS

description: network-snapshot-000800.pkl - StyleGAN2 weight of melanocyticnevus_256x256 network-snapshot-000800_256.zip - result images <br> network-snapshot-000200.pkl - melanocyticnevus_512x512 network-snapshot-000200_512.zip - result images <br>
DOI: 10.5281/zenodo.3979103
title: Quicklooks of X-SACR data during BAECC - stratiform rainfall

description: Quicklooks of vertically-pointing X-band radar reflectivity. The detected melting layer boundaries are marked by black dots. The filename is in the format of 'z_year-month-day-hour-minute-second' (UTC). Reference: Li, H., Tiira, J., von Lerber, A., & Moisseev, D. (2020). Towards the connection between snow microphysics and melting layer: Insights from multi-frequency and dual-polarization radar observations during BAECC. Atmospheric Chemistry and Physics Discussions, 1–23, in press.
DOI: 10.17632/rkrhmydn6z.1
title: Faial July1998 selected events

description: Original seismograms dataset of the 688 selected events of the July 1998 seismic swarm that struck Faial and Pico islands, in the Azores archipelago. The 688 dataset correspond to the best constrained hypocenters, that were used in the 3D tomographic modelling of the area of Dias et al. (2007), and comprises a file hyo688.out with the location of each event and corresponding P and S waves travel time picks and waveform file all SEISAN/nordic format. A file STATION0.HYP containing the seismic stations coordinates and the 1D model of Matias et al. (2007) is also provided in nordic format.
DOI: 10.5517/cc6bwbq
title: CCDC 189203: Experimental Crystal Structure Determination

description: Related Article: M.Enders, O.Fritz, H.Pritzkow|2002|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.3163215
title: Noise exposure at ultrasound-related industrial workplaces and public sites

description: The dataset contains single measurements at different public sites and workplaces in Europe. The data has been used or obtained in the context of the project 15HLT03 “EarsII” from the EMPIR-programme.

For each measurement metadata is available. This includes the measurement circumstances and involved machinery, a description of the measurement location and noise reduction measures, the microphone position during measurement, and the measurement procedure used to obtain the measurement data.

A detailed description of all the quantities contained in the dataset is documented in the accompanying pdf-file.
description: This project has received funding from the EMPIR programme co-financed by the Participating States and from the European Union's Horizon 2020 research and innovation programme.
description: {"references": ["Ullisch-Nelken, C., Wolff, A., Sch\u00f6newei\u00df, R., Kling, C. A measurement procedure for the assessment of industrial ultrasonic noise. Conference proceedings of the 25th International Congress on Sound and Vibration, ICSV 25, 2018", "Ullisch-Nelken, C., Kusserow, H., Wolff, A. Analysis of the noise exposure and the distribution of machine types at ultrasound-related industrial workplaces in Germany. Acta Acust united Ac Vol. 105 No. 5., p. 733, 2018", "Fletcher, Mark D., et al. \"Public exposure to ultrasound and very high-frequency sound in air.\" The Journal of the Acoustical Society of America 144.4 (2018): 2554-2564", "Kusserow, H. Kritische Betrachtung der deutschen Beurteilungskriterien f\u00fcr berufliche Ultraschalleinwirkungen auf das Geh\u00f6r im Rahmen eines internationalen Vergleichs und am Beispiel von Ultraschall-Schwei\u00dfmaschinen, IFA Report, DGUV, 2016, ISBN 978-3-86423-176-4", "VDI 3766:2012 Ultrasound \u2014 Work place \u2014 Measurement, assessment, judgement and reduction", "IEC 61672-1:2013 Electroacoustics \u2013 Sound level meters \u2013 Part 1: Specifications", "Infrasound and ultrasound filter set type 1627. Instruction manual. Hrsg.: Br\u00fcel & Kjaer 1985", "IEC 61012:1990 Filters for the measurement of audible sound in the presence of ultrasound"]}
DOI: 10.5523/bris.2j2rqgzedxlq02oqbb4vmycnc2
title: GWAS summary statistics for dental caries and periodontitis
title: GLIDE consortium GWAS

description: This deposit contains summary statistics of genome-wide analysis for dental endpoints in GLIDE consortium, and UK Biobank as well as multi-trait analysis combining both GLIDE and UKBiobank. A full description of the files is included as a readme, and a full description of the workflow is described in the linked manuscript (under review). Contributing studies, people and funders are acknowledged in the linked manuscript.
DOI: 10.6084/m9.figshare.19919059
title: Dataset

description: Data set for land-atmosphere interactions at a semi-arid region.
DOI: 10.6084/m9.figshare.21205276
title: EU–Africa Strategic Corridors and critical raw materials: two-way approach to regional development and security of supply

description: The paper has two interconnected bodies. The first one deals with mineral resource indicators and their role in drawing 11 EU–Africa Strategic Corridors, in a broader context of Africa–EU partnership. The second strives to understand how such Strategic Corridors are also mineral corridors, i.e. development promotors that use mineral resources as a catalyser to create and strengthen value chains and territorial organisation, boosting economic and societal development at regional scale. The results can help understand how Strategic Corridors can improve access to the present and future mines, mitigating the risk of supply disruptions of critical raw materials for the EU.
DOI: 10.6084/m9.figshare.21205276.v1
title: EU–Africa Strategic Corridors and critical raw materials: two-way approach to regional development and security of supply

description: The paper has two interconnected bodies. The first one deals with mineral resource indicators and their role in drawing 11 EU–Africa Strategic Corridors, in a broader context of Africa–EU partnership. The second strives to understand how such Strategic Corridors are also mineral corridors, i.e. development promotors that use mineral resources as a catalyser to create and strengthen value chains and territorial organisation, boosting economic and societal development at regional scale. The results can help understand how Strategic Corridors can improve access to the present and future mines, mitigating the risk of supply disruptions of critical raw materials for the EU.
DOI: 10.6084/m9.figshare.21510039.v1
title: Deseq2 results

description: Comparison of the transcriptome profiles from planktonic versus single-typic communities and form single-typic versus multi-typic biofilm communities. The genes were annotated using RAST and categorized based on the EggNOG 5.0 database with COG categories and descriptions.
DOI: 10.6084/m9.figshare.21510039
title: Deseq2 results

description: Comparison of the transcriptome profiles from planktonic versus single-typic communities and form single-typic versus multi-typic biofilm communities. The genes were annotated using RAST and categorized based on the EggNOG 5.0 database with COG categories and descriptions.