cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/n31s3d
title: Hanover pollen surface sample dataset

description: Raw data for the Hanover pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.16747513
title: Validation datasets, code, and plots for the Archipelago method.

description: This archive contains validation datasets, output figures, and R scripts used in the paper "Archipelago method for variant set association test statistics" (Lawless et al., medRxiv https://doi.org/10.1101/2025.03.17.25324111). It includes simulated and real GWAS/VSAT summary statistics across 1000 Genomes (1KG), UK Biobank (UKBB), and the Swiss Pediatric Sepsis Study (SPSS). 

<pre>
archipelago_validation/         1.5G total
├── README.md                  (2.0K)
├── data/                      (1.5G)  # contains large files like GWAS summary stats
├── output/                    (2.2M)  # figures
└── src/                       (76K)   # analysis scripts
</pre>
DOI: 10.21233/n3h394
title: Derinda pollen surface sample dataset

description: Raw data for the Derinda pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.j23zxr
title: Occurrence Download

description: A dataset containing 26656 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudoplatystoma magdaleniatum"
 ]
}

 The dataset includes 26656 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015579-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nkv6kp
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chelonoidis carbonarius",
 "Country is Dominica",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015581-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n3cd77
title: Woodbn24 pollen surface sample dataset

description: Raw data for the Woodbn24 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.25345/c52v2cp5f
title: MassIVE MSV000098728 - Overexpression of the signaling-coordinator GAB2 can play an important role in Acute Myeloid Leukemia progression
title: Label free quantification (LFQ) proteomics experimental data from a study of murine acute myeloid leukemia (AML) that spontaneously develops in mice with Dnmt3aR878H/+ x Npm1cA/+ bone marrow. These mice spontaneously develop myelomonocytic AML in 6-15 months. We characterized pre-leukemic bone marrow samples, and 11 independent spontaneous AMLs that developed in these doubly-mutant mice ("mAML1-11").10 of 11 AMLs contained an amplification of murine chromosome 7 (chr7), usually as the only structural variant. Furthermore, we identified two non-leukemic mice where whole genome sequencing revealed amplification of chromosome 7 (+7) and no other cooperating mutations in identifiable driver genes (pre-tumor, +7 only). One of these clonal expansions was tested twice in secondary transplant assays, and did not commonly yield fatal disease when transplanted into recipients, suggesting that +7 is an intermediate step in AML progression. Further experiments identified Gab2 as an important gene on chromosome 7 for AML pathogenesis in this model. Retroviral overexpression of Gab2 in Dnmt3aR878H/+ x Npm1cA/+ bone marrow led to expansion of bone marrow cells both in vitro and in vivo in transplanted, recipient mice, as well as to accelerated development of AML; the resulting AML samples are called GAB2 mAML in this dataset. Measurements were performed from bulk bone marrow of mice. Data can be explored further at mAML.leylab.org. Note that data uploaded here were analyzed using the publicly available FragPipe software, with full workflow details available for download. In the JCI publication in press and on the mAML.leylab.org website, data were analyzed as described in the methods section, with expected slight variation in the protein quantification results. The conclusions presented in the publication are supported by both analyses.
DOI: 10.15468/dl.8nhqz6
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epinephelus leprosus"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015580-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n37m3j
title: Wardsg17 pollen surface sample dataset

description: Raw data for the Wardsg17 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.aczs6z
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chelonoidis carbonarius",
 "Country is Saint Vincent and the Grenadines",
 "HasCoordinate is true"
 ]
}

 The dataset includes 22 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015582-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n33x3d
title: Woodbn07 pollen surface sample dataset

description: Raw data for the Woodbn07 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n3039g
title: Blanch Road pollen surface sample dataset

description: Raw data for the Blanch Road pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n38c7z
title: Coon pollen surface sample dataset

description: Raw data for the Coon pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.xvmgxc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Aquila adalberti)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015583-250802193616735/datasets/export for details.
DOI: 10.21233/n34k51
title: Liberty pollen surface sample dataset

description: Raw data for the Liberty pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n30w2r
title: Clinton pollen surface sample dataset

description: Raw data for the Clinton pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.tzs3mj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Aquila adalberti)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015584-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n3g40r
title: Green WD pollen surface sample dataset

description: Raw data for the Green WD pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n3bd6j
title: English River pollen surface sample dataset

description: Raw data for the English River pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.jxwvwu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Aquila adalberti)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015585-250802193616735/datasets/export for details.
DOI: 10.15468/dl.6rfpcs
title: Occurrence Download

description: A dataset containing 58623 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Germany, Poland, Czechia, Liechtenstein, Slovakia, Austria, Hungary, Switzerland)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is December",
 "TaxonKey is Parus major",
 "Year 2015-2024"
 ]
}

 The dataset includes 58623 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015563-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ub9wq6
title: Occurrence Download

description: A dataset containing 222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aequidens pallidus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 222 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015587-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n36q4n
title: Dickey Valley pollen surface sample dataset

description: Raw data for the Dickey Valley pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n32x1b
title: Tennyson pollen surface sample dataset

description: Raw data for the Tennyson pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.25549/inscriptifact-ouc110606048
title: Persepolis Fortification Aramaic Text 567, PFAT 567

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 567 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription on bottom edge, obverse toward bottom edge and reverse. Seal impression on obverse. ❧ [Physical Object Note:] Minor cracks throughout tablet. Flat edge broken off.
DOI: 10.25549/inscriptifact-ouc110606258
title: Persepolis Fortification Aramaic Text 572, PFAT 572

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 572 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription on obverse, reverse, bottom edge and upper edge (?). Seal impression on reverse and upper edge. ❧ [Physical Object Note:] Entire round edge broken off. Bottom edge and upper edge toward round end broken. Minor cracks throughout.
DOI: 10.25549/inscriptifact-ouc110606045
title: Persepolis Fortification Aramaic Text 567, PFAT 567

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 567 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription on bottom edge, obverse toward bottom edge and reverse. Seal impression on obverse. ❧ [Physical Object Note:] Minor cracks throughout tablet. Flat edge broken off.
DOI: 10.25549/inscriptifact-ouc110606219
title: Persepolis Fortification Aramaic Text 570, PFAT 570

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 570 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription on obverse, reverse, upper edge and bottom edge. Seal impression on flat edge. ❧ [Physical Object Note:] Minor cracks on table with round edge broken off.
DOI: 10.25549/inscriptifact-ouc110606044
title: Persepolis Fortification Aramaic Text 567, PFAT 567

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 567 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription on bottom edge, obverse toward bottom edge and reverse. Seal impression on obverse. ❧ [Physical Object Note:] Minor cracks throughout tablet. Flat edge broken off.
DOI: 10.25549/inscriptifact-ouc110606205
title: Persepolis Fortification Aramaic Text 570, PFAT 570

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 570 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription on obverse, reverse, upper edge and bottom edge. Seal impression on flat edge. ❧ [Physical Object Note:] Minor cracks on table with round edge broken off.
DOI: 10.25549/inscriptifact-ouc110609677
title: Persepolis Fortification Aramaic Text 692, PFAT 692

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 692 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription on obverse and reverse (?). Seal impression on obverse and reverse. ❧ [Physical Object Note:] Cracking throughout tablet. Round edge broken off.
DOI: 10.25549/inscriptifact-ouc110612418
title: Persepolis Fortification Elamite Tablet 0968, PF 0968

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PF 0968 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform, Aramaic ❧ [Physical Object Description:] Clay tablet with cuneiform text. Aramaic ink inscription on reverse and right edge. Seal impression on reverse, left edge and right edge. ❧ [Physical Object Note:] Obverse chipped toward mid-upper edge. Reverse chipped at bottom edge. Bottom edge broken.
DOI: 10.25549/inscriptifact-ouc110609676
title: Persepolis Fortification Aramaic Text 692, PFAT 692

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 692 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription on obverse and reverse (?). Seal impression on obverse and reverse. ❧ [Physical Object Note:] Cracking throughout tablet. Round edge broken off.
DOI: 10.25549/inscriptifact-ouc110612409
title: Persepolis Fortification Elamite Tablet 0968, PF 0968

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PF 0968 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform, Aramaic ❧ [Physical Object Description:] Clay tablet with cuneiform text. Aramaic ink inscription on reverse and right edge. Seal impression on reverse, left edge and right edge. ❧ [Physical Object Note:] Obverse chipped toward mid-upper edge. Reverse chipped at bottom edge. Bottom edge broken.
DOI: 10.25549/inscriptifact-ouc110609671
title: Persepolis Fortification Aramaic Text 692, PFAT 692

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PFAT 692 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription on obverse and reverse (?). Seal impression on obverse and reverse. ❧ [Physical Object Note:] Cracking throughout tablet. Round edge broken off.
DOI: 10.25549/inscriptifact-ouc110612400
title: Persepolis Fortification Elamite Tablet 0354, PF 0354

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] PF 0354 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on reverse, upper edge and left edge. ❧ [Physical Object Note:] Minimal damage on tablet.