cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8027894
title: anas_bernieri_decontaminated_gx.fasta.gz

description: .
DOI: 10.25403/upresearchdata.23036591
title: Genotypic profiling of an ongoing outbreak of multidrug-resistant linezolid resistant Staphylococcus capitis in private hospitals

description: This dataset displays data gathered and illustrated in tables and figures format. Table3.1: The distribution of the 119 linezolid resistant multidrug-resistant <em>Staphylococcus capitis</em> isolates arranged by the year of collection, along with age groups, gender and region of the hospitals. Female = F; Male = M; Unknown = U; A = Pretoria; B = Centurion; C = Midrand; D = Johannesburg; E = Limpopo; F = Rustenburg; G = Trichardt Table 3.2: Genes, primers and PCR conditions that were used for the amplification of fragments to identify <em>Staphylococcus capitis</em> and detect plasmid-mediated linezolid resistant mechanisms in <em>S. capitis</em> isolates Table 3.3: The Master mix reaction composition for the M-PCR assay to identify the <em>Staphylococcus capitis</em> isolates and for the detection of the <em>cfr</em> gene in <em>S. capitis</em> isolates Table 3.4: Distribution of 119 linezolid resistant, multidrug-resistant <em>Staphylococcus capitis</em> isolates by year of collection, linezolid resistant minimum inhibitory concentration, and number of antimicrobial agents resistant (MDR). n = number of isolates; U = unknown Figure 3.1: The map displays the locations of hospitals in the greater Gauteng area where isolates were collected. Regions are labelled A to G, hospitals are sub-labelled by numbers and differentiated by color. The size of each label corresponds to the number of isolates collected from that hospital. The map was created using Tableau (Salesforce Inc, USA). Figure 3.2: Dendrogram showing the genetic relatedness of the <em>Staphylococcus capitis</em> isolates in the study. The various pulsotypes are labelled A to E. The blue box outline indicates the isolates that were chosen for WGS.
DOI: 10.25403/upresearchdata.23036591.v1
title: Genotypic profiling of an ongoing outbreak of multidrug-resistant linezolid resistant Staphylococcus capitis in private hospitals

description: This dataset displays data gathered and illustrated in tables and figures format. Table3.1: The distribution of the 119 linezolid resistant multidrug-resistant <em>Staphylococcus capitis</em> isolates arranged by the year of collection, along with age groups, gender and region of the hospitals. Female = F; Male = M; Unknown = U; A = Pretoria; B = Centurion; C = Midrand; D = Johannesburg; E = Limpopo; F = Rustenburg; G = Trichardt Table 3.2: Genes, primers and PCR conditions that were used for the amplification of fragments to identify <em>Staphylococcus capitis</em> and detect plasmid-mediated linezolid resistant mechanisms in <em>S. capitis</em> isolates Table 3.3: The Master mix reaction composition for the M-PCR assay to identify the <em>Staphylococcus capitis</em> isolates and for the detection of the <em>cfr</em> gene in <em>S. capitis</em> isolates Table 3.4: Distribution of 119 linezolid resistant, multidrug-resistant <em>Staphylococcus capitis</em> isolates by year of collection, linezolid resistant minimum inhibitory concentration, and number of antimicrobial agents resistant (MDR). n = number of isolates; U = unknown Figure 3.1: The map displays the locations of hospitals in the greater Gauteng area where isolates were collected. Regions are labelled A to G, hospitals are sub-labelled by numbers and differentiated by color. The size of each label corresponds to the number of isolates collected from that hospital. The map was created using Tableau (Salesforce Inc, USA). Figure 3.2: Dendrogram showing the genetic relatedness of the <em>Staphylococcus capitis</em> isolates in the study. The various pulsotypes are labelled A to E. The blue box outline indicates the isolates that were chosen for WGS.
DOI: 10.25403/upresearchdata.23257343.v1
title: Geological maps, backscatter electron images and lithogeochemical results of the Schrikkloof formation, Rooiberg group (bushveld complex)

description: This dataset contains geological maps that were generated using historical data as well as field mapping; the geology comprises the Schrikkloof and Swaershoek Formations. Several pictures, forming part of the dataset, were taken during the field excursion. Rock samples were collected from the field and sent to the Council for Geoscience laboratory to make polished thin sections. The photomicrographs were acquired from polished thin sections using the Olympus BX41 microscope with an SC100 Camera. Furthermore, the polished thin sections were utilised to acquire backscatter electron images by means of the scanning electron microscope - energy dispersive X-ray spectroscopy (SEM-EDX) analysis method at the University of Pretoria. The X-ray fluorescence (XRF) and inductively coupled plasma mass spectrometry (ICP-MS) methods were used to analyse rocks for lithogeochemical results reported in this dataset. <br>
DOI: 10.25403/upresearchdata.23257343
title: Geological maps, backscatter electron images and lithogeochemical results of the Schrikkloof formation, Rooiberg group (bushveld complex)

description: This dataset contains geological maps that were generated using historical data as well as field mapping; the geology comprises the Schrikkloof and Swaershoek Formations. Several pictures, forming part of the dataset, were taken during the field excursion. Rock samples were collected from the field and sent to the Council for Geoscience laboratory to make polished thin sections. The photomicrographs were acquired from polished thin sections using the Olympus BX41 microscope with an SC100 Camera. Furthermore, the polished thin sections were utilised to acquire backscatter electron images by means of the scanning electron microscope - energy dispersive X-ray spectroscopy (SEM-EDX) analysis method at the University of Pretoria. The X-ray fluorescence (XRF) and inductively coupled plasma mass spectrometry (ICP-MS) methods were used to analyse rocks for lithogeochemical results reported in this dataset. <br>
DOI: 10.6084/m9.figshare.23501529
title: Annotation of two barley genome

description: Annotation files of high-quality genome sequencing and assembly of 2 wild barley from Evolutionary Canyon
DOI: 10.25403/upresearchdata.23272268
title: The susceptibility of pupae of <em>Gonipterus</em> sp. 2 to the virulence of five entomopathogenic nematode species with different dispersal behaviors

description: This dataset is an illustrative of data of three chapters( 2, 3 & 4) for a Master's dissertation. The data in Chapter 2 consists of the mortality of uncased pupae of <em>Gonipterus</em> sp. 2 caused by five South African entomopathogenic nematodes (EPNs) species. The pupal mortality was recorded 48 hours post-inoculation with EPNs in 12-well bioassay plates. The data were subjected to one-way analysis of variance (ANOVA) to determine the significant effect of EPN species on pupal mortality. The data in Chapter 3 shows the dispersal distance traveled by infective juveniles of EPNs towards or away from wax moth larvae in Petri dishes. One-way ANOVA was used to determine the significant difference in dispersal distance towards or away from the host between EPNs. The data also shows the influence of a rough substrate and a smooth substrate on the dispersal distance traveled by infective juveniles of EPNs in Petri dishes. One-way ANOVA was used to determine the significant difference between the dispersal distance traveled by EPNs on a rough substrate and rough substrate. The data in Chapter 4 shows the effect of nematode-infected cadavers and aquoeus suspension application methods on the efficacy of <em>Steinernema yirgalemense</em> against cased pupae of <em>Gonipterus</em> sp. 2 in Greenhouse tirals. The mortality of pupae, buried in soil in 2 L capacity planting bags, was recorded seven days after exposure to <em>S. yirgalemense.</em> The data was subjected to student t-test to determine the effect of the application methods on the efficacy of S. yirgalemense against puape of <em>Gonipterus</em> sp. 2.
DOI: 10.25403/upresearchdata.23272268.v1
title: The susceptibility of pupae of <em>Gonipterus</em> sp. 2 to the virulence of five entomopathogenic nematode species with different dispersal behaviors

description: This dataset is an illustrative of data of three chapters( 2, 3 & 4) for a Master's dissertation. The data in Chapter 2 consists of the mortality of uncased pupae of <em>Gonipterus</em> sp. 2 caused by five South African entomopathogenic nematodes (EPNs) species. The pupal mortality was recorded 48 hours post-inoculation with EPNs in 12-well bioassay plates. The data were subjected to one-way analysis of variance (ANOVA) to determine the significant effect of EPN species on pupal mortality. The data in Chapter 3 shows the dispersal distance traveled by infective juveniles of EPNs towards or away from wax moth larvae in Petri dishes. One-way ANOVA was used to determine the significant difference in dispersal distance towards or away from the host between EPNs. The data also shows the influence of a rough substrate and a smooth substrate on the dispersal distance traveled by infective juveniles of EPNs in Petri dishes. One-way ANOVA was used to determine the significant difference between the dispersal distance traveled by EPNs on a rough substrate and rough substrate. The data in Chapter 4 shows the effect of nematode-infected cadavers and aquoeus suspension application methods on the efficacy of <em>Steinernema yirgalemense</em> against cased pupae of <em>Gonipterus</em> sp. 2 in Greenhouse tirals. The mortality of pupae, buried in soil in 2 L capacity planting bags, was recorded seven days after exposure to <em>S. yirgalemense.</em> The data was subjected to student t-test to determine the effect of the application methods on the efficacy of S. yirgalemense against puape of <em>Gonipterus</em> sp. 2.
DOI: 10.5517/ccdc.csd.cc2f8gjq
title: CCDC 2242463: Experimental Crystal Structure Determination

description: Related Article: Mikko Hänninen, Reijo Sillanpää|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fcxf5
title: CCDC 2245777: Experimental Crystal Structure Determination

description: Related Article: Manpreet Singh, Arun Karmakar, Nilanjan Seal, Partha Pratim Mondal, Subrata Kundu, Subhadip Neogi|2023|ACS Applied Materials and Interfaces|15|24504|doi:10.1021/acsami.3c03619
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8026626
title: Data of SST patch experiments, Part2: cooling patches

description: This dataset is part-2 of the SST patch experiments used in Zhou et al. 2020. Part-1 can be found in https://www.zenodo.org/record/8025843
DOI: 10.5281/zenodo.8026625
title: Data of SST patch experiments, Part2: cooling patches

description: This dataset is part-2 of the SST patch experiments used in Zhou et al. 2020. Part-1 can be found in https://www.zenodo.org/record/8025843
DOI: 10.5281/zenodo.8027961
title: anas_capensis_decontaminated_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.8027960
title: anas_capensis_decontaminated_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.8027973
title: enteromius_radiatus_decontamination_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.8027972
title: enteromius_radiatus_decontamination_gx.fasta.gz

description: .
DOI: 10.6084/m9.figshare.23501526
title: Supplementary Table 2. Differentially expressed protein-coding genes in low-grade glioma and glioblastoma compared to normal brain samples.

description: <strong>Integrative genomics approach to primary ciliary gene regulation in glioma</strong> Doctoral Thesis Supplementary Table 2. Differentially expressed protein-coding genes in low-grade glioma and glioblastoma compared to normal brain samples. The analysis used read counts from 14 normal brain tissue (Normal), 529 low-grade glioma (LGG), and 169 glioblastoma (GBM) samples from TCGA and CPTAC datasets and were processed and investigated using DESEq2. The table shows differentially expressed genes with an adjusted p-value &lt; 0.05 and a log2 fold change of less than -2 or more than 2.
DOI: 10.6084/m9.figshare.23501526.v1
title: Supplementary Table 2. Differentially expressed protein-coding genes in low-grade glioma and glioblastoma compared to normal brain samples.

description: <strong>Integrative genomics approach to primary ciliary gene regulation in glioma</strong> Doctoral Thesis Supplementary Table 2. Differentially expressed protein-coding genes in low-grade glioma and glioblastoma compared to normal brain samples. The analysis used read counts from 14 normal brain tissue (Normal), 529 low-grade glioma (LGG), and 169 glioblastoma (GBM) samples from TCGA and CPTAC datasets and were processed and investigated using DESEq2. The table shows differentially expressed genes with an adjusted p-value &lt; 0.05 and a log2 fold change of less than -2 or more than 2.
DOI: 10.6084/m9.figshare.23501547
title: Branching_angle_hexagon_ETP

description: Shape files of hexagons analyzed on the eastern Tibetan Plateau, including ID of each hexagon (GRID_ID), mean aridity index (AI), mean branching angles (angle [°]), mean channel slope (ChnlSlope) and mean channel steepness index (MeanKSN) of each hexagon.
DOI: 10.5281/zenodo.8028032
title: enteromius_treurensis_decontaminated_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.8028031
title: enteromius_treurensis_decontaminated_gx.fasta.gz

description: .
DOI: 10.5517/ccdc.csd.cc2fv2yb
title: CCDC 2259402: Experimental Crystal Structure Determination

description: Related Article: Xiangmei Liu, Shi Wang, Wangwang Xie, Jingfei Ni, Kang Xiao, Shujuan Liu, Wen Lv, Qiang Zhao|2023|J.Mater.Chem.C|11|7405|doi:10.1039/D3TC00761H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f99fh
title: CCDC 2243266: Experimental Crystal Structure Determination

description: Related Article: Xiangmei Liu, Shi Wang, Wangwang Xie, Jingfei Ni, Kang Xiao, Shujuan Liu, Wen Lv, Qiang Zhao|2023|J.Mater.Chem.C|11|7405|doi:10.1039/D3TC00761H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8028039
title: heteromormyrus_szaboi_decontaminated_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.8028038
title: heteromormyrus_szaboi_decontaminated_gx.fasta.gz

description: .
DOI: 10.25403/upresearchdata.23258000
title: Genetic sequences of isolated viruses

description: The data comprise sequences of isolated viruses, the Ngari virus from cattle, goats, and sheep and a novel 10-segment orbivirus named Kaptombes virus from cattle. Hantavirus was detected in shrews, and partial sequences of the L segment have been concluded. The sampled shrews were identified through sequencing of the cytochrome b and the partial sequences have been concluded.
DOI: 10.25403/upresearchdata.23258000.v1
title: Genetic sequences of isolated viruses

description: The data comprise sequences of isolated viruses, the Ngari virus from cattle, goats, and sheep and a novel 10-segment orbivirus named Kaptombes virus from cattle. Hantavirus was detected in shrews, and partial sequences of the L segment have been concluded. The sampled shrews were identified through sequencing of the cytochrome b and the partial sequences have been concluded.
DOI: 10.5281/zenodo.8028068
title: melikaiella_ostensackeni_decontaminated_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.8028067
title: melikaiella_ostensackeni_decontaminated_gx.fasta.gz

description: .
DOI: 10.34740/kaggle/dsv/5909056
title: COVID Vaccination in World (updated daily)
DOI: 10.15468/rz8t2x
title: Revision of the genus Sitticus Simon, 1901 s. l. (Araneae: Salticidae) *

description: This dataset contains the digitized treatments in Plazi based on the original journal article Prószyński, Jerzy (2017): Revision of the genus Sitticus Simon, 1901 s. l. (Araneae: Salticidae) *. Ecologica Montenegrina 10: 35-50, DOI: 10.37828/em.2017.10.7
DOI: 10.5281/zenodo.8028087
title: nothura_maculosa_decontaminated_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.8028086
title: nothura_maculosa_decontaminated_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.8028123
title: SciExpeM - 10.5281/zenodo.8028123

description: Zhang, Hao, 0000-0002-1639-4089; Schmitt, Steffen; Ruwe, Lena, 0000-0002-6244-1755; Kohse-Höinghaus, Katharina - Combustion And Flame, 2021, (224), 94-107
DOI: 10.5281/zenodo.8028122
title: SciExpeM - 10.5281/zenodo.8028123

description: Zhang, Hao, 0000-0002-1639-4089; Schmitt, Steffen; Ruwe, Lena, 0000-0002-6244-1755; Kohse-Höinghaus, Katharina - Combustion And Flame, 2021, (224), 94-107
DOI: 10.5281/zenodo.8028121
title: spatula_discors_decontaminated_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.8028120
title: spatula_discors_decontaminated_gx.fasta.gz

description: .
DOI: 10.25403/upresearchdata.22801178
title: Children's perceptions of fear

description: This study investigated the ecosystemic factors influencing the experience of fear in young children. Through qualitative method, a sample of 12 grade three learners’ drawings, 12 parents, three grade three teachers from low socio-economic status, middle socio-economic status and high socio-economic status participated in the study. A multiple case study design was employed to explore and compare what influence fearful experiences among Grade 3 learners from three different socio-economic class. I analysed data through thematic inductive analysis.
DOI: 10.25403/upresearchdata.22801178.v1
title: Children's perceptions of fear

description: This study investigated the ecosystemic factors influencing the experience of fear in young children. Through qualitative method, a sample of 12 grade three learners’ drawings, 12 parents, three grade three teachers from low socio-economic status, middle socio-economic status and high socio-economic status participated in the study. A multiple case study design was employed to explore and compare what influence fearful experiences among Grade 3 learners from three different socio-economic class. I analysed data through thematic inductive analysis.
DOI: 10.3886/e192150
title: Can colonial institutions explain differences in labour returns? Evidence from rural colonial India

description: Replication files for: "Can colonial institutions explain differences in labour returns? Evidence from rural colonial India"<br><br>
DOI: 10.3886/e192150v1
title: Can colonial institutions explain differences in labour returns? Evidence from rural colonial India

description: Replication files for: "Can colonial institutions explain differences in labour returns? Evidence from rural colonial India"<br><br>
DOI: 10.25828/2vdc-xq88
title: National Reading Survey 2022-2023
DOI: 10.5281/zenodo.8028180
title: Baseline data for Citizen Energy Responsible Behaviour in 27 Member States

description: This dataset contains all the information on the levels that each country in Europe should have in the labelling system to assess citizens energy behaviours fully described in the document AURORA D1.1 Near-Zero Emissions Citizens Label https://doi.org/10.5281/zenodo.7594879 The zip file contains one document for each member state. Reference values are extracted from the same datasources individuated in D1.1 for the 5 selected countries fully described in the document.
DOI: 10.5281/zenodo.8028181
title: Baseline data for Citizen Energy Responsible Behaviour in 27 Member States

description: This dataset contains all the information on the levels that each country in Europe should have in the labelling system to assess citizens energy behaviours fully described in the document AURORA D1.1 Near-Zero Emissions Citizens Label https://doi.org/10.5281/zenodo.7594879 The zip file contains one document for each member state. Reference values are extracted from the same datasources individuated in D1.1 for the 5 selected countries fully described in the document.
DOI: 10.5281/zenodo.8023349
title: Microscopy-based assessment of RNA polymerase II clusters in zebrafish embryos treated with JQ1 and flavopiridol (additional data)

description: This repository contains the data and MatLab analysis scripts of the analysis of histone 3 lysine 27 acetylation (H3K27ac) at RNA polymerase II clusters in zebrafish embryos treated with the inhibitors JQ1 or flavopiridol. Samples were prepared and images were recorded by Süheyla Eroglu-Kayikci and Elisa Kämmer in Lennart Hilbert's laboratory, images were analyzed by Lennart Hilbert. This repository contains additional data to the following main repository: https://doi.org/10.5281/zenodo.8019764
DOI: 10.5281/zenodo.8023348
title: Microscopy-based assessment of RNA polymerase II clusters in zebrafish embryos treated with JQ1 and flavopiridol (additional data)

description: This repository contains the data and MatLab analysis scripts of the analysis of histone 3 lysine 27 acetylation (H3K27ac) at RNA polymerase II clusters in zebrafish embryos treated with the inhibitors JQ1 or flavopiridol. Samples were prepared and images were recorded by Süheyla Eroglu-Kayikci and Elisa Kämmer in Lennart Hilbert's laboratory, images were analyzed by Lennart Hilbert. This repository contains additional data to the following main repository: https://doi.org/10.5281/zenodo.8019764
DOI: 10.5281/zenodo.8028136
title: Sample datasets for verifying SPREADS installation

description: This archive contains 6 netCDF files that are used for verifying the installation of SPREADS.
DOI: 10.5281/zenodo.8028135
title: Sample datasets for verifying SPREADS installation

description: This archive contains 6 netCDF files that are used for verifying the installation of SPREADS.
DOI: 10.5281/zenodo.8019764
title: Microscopy-based assessment of RNA polymerase II clusters in zebrafish embryos treated with JQ1 and flavopiridol

description: This repository contains the data and MatLab analysis scripts of the analysis of histone 3 lysine 27 acetylation (H3K27ac) at RNA polymerase II clusters in zebrafish embryos treated with the inhibitors JQ1 or flavopiridol. Samples were prepared and images were recorded by Süheyla Eroglu-Kayikci and Elisa Kämmer in Lennart Hilbert's laboratory, images were analyzed by Lennart Hilbert. To analyse date data, the raw image data are first extracted into MatLab-native files using the MultiPosition_extraction_nd2.m script. The actual analysis is then carried out using the ClusterAnalysis.m script. Example microscopy images were produced using the ExampleImages.m script. The extracted data can be reviewed using the ReviewExtractedStacks.m script. Additional data, stored in separate repository due to size limits: https://doi.org/10.5281/zenodo.8023349