cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25584/1986545
title: Metatransciptomic Analysis Data for Interactive effects of depth and differential irrigation on soil microbiome composition and functioning

description: RNA was collected from soil at different depths and after three different levels of irrigation T1 100% of normal field irrigation, T4: 18.75% or normal irrigation and T5: unirrigated controls. Total RNA was isolated using the Zymo Quick-RNA fecal/soil microbe miniprep (catalog no. R2040), incorporating the DNase I treatment using Zymo’s DNase I kit (catalog no. E1010). To increase the yield of RNA, we modified the manufacturer’s instructions by first doubling the amount of soil per extraction (from 0.25 g to 0.5 g) and by performing extractions in triplicate before pooling separate extractions together. Certain soil samples (largely those from deeper soil layers) had low yield (&lt; 100 ng per extraction) so additional rounds of extraction were performed to obtain sufficient RNA. RNA concentration was assessed using a Qubit RNA HS assay kit (Thermo Fisher) and RNA quality was determined using an Agilent 2100 BioAnalyzer (Agilent; Santa Clara, CA). The resultant RNA samples were then sequenced by GENEWIZ using Illumina technology (GENEWIZ; South Plainfield, NJ). Sequences were then aligned to a soil metagenome previously obtained from the same site using the Burrows-Wheeler aligner (BWA). SAM files were then converted to raw counts using HTSeq.
DOI: 10.25914/3cw7-a967
title: AuScope Australian National Virtual Core Library (NVCL) - CSIRO
DOI: 10.25914/bztg-rg43
title: AuScope Australian National Virtual Core Library (NVCL) Collection
DOI: 10.25914/8q6h-q623
title: AuScope Australian National Virtual Core Library (NVCL) Collection - Queensland
DOI: 10.25914/c4zg-za54
title: AuScope Australian National Virtual Core Library (NVCL) Collection - Tasmania
DOI: 10.25914/vh88-5s87
title: AuScope Australian National Virtual Core Library (NVCL) Collection - Victoria
DOI: 10.6084/m9.figshare.23590761
title: Datasets.zip

description: The file is about the image dataset used in "Low light Image Enhancement via Improved Zero Reference Deep Curve Estimation", including training and testing sets, as well as a collection of all the datasets used in the paper
DOI: 10.6084/m9.figshare.23590761.v1
title: Datasets.zip

description: The file is about the image dataset used in "Low light Image Enhancement via Improved Zero Reference Deep Curve Estimation", including training and testing sets, as well as a collection of all the datasets used in the paper
DOI: 10.25914/jgye-d059
title: AuScope Australian National Virtual Core Library (NVCL) Collection - Northern Territory
DOI: 10.25914/ctaf-6c13
title: AuScope Australian National Virtual Core Library (NVCL) Collection - Western Australia
DOI: 10.25914/7dz2-8t22
title: AuScope Australian National Virtual Core Library (NVCL) Collection - South Australia
DOI: 10.25914/2dy2-2592
title: AuScope Australian National Virtual Core Library (NVCL) Collection - New South Wales
DOI: 10.6084/m9.figshare.23559232
title: Codes for "Epidemiological impacts of post-infection mortality''

description: This contains codes to generate the figures.
DOI: 10.6084/m9.figshare.23559232.v1
title: Codes for "Epidemiological impacts of post-infection mortality''

description: This contains codes to generate the figures.
DOI: 10.5281/zenodo.8088573
title: A federated learning framework based on transfer learning and knowledge distillation for targeted advertising-Click-Through Rate Prediction Dataset

description: https://www.kaggle.com/c/avazu-ctr-prediction
DOI: 10.5281/zenodo.8088572
title: A federated learning framework based on transfer learning and knowledge distillation for targeted advertising-Click-Through Rate Prediction Dataset

description: https://www.kaggle.com/c/avazu-ctr-prediction
DOI: 10.6084/m9.figshare.23521827
title: Reproductive success and sea surface temperature data from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: Simplified data used for the analysis of reproductive success and sea surface temperature.
DOI: 10.6084/m9.figshare.23521827.v1
title: Reproductive success and sea surface temperature data from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: Simplified data used for the analysis of reproductive success and sea surface temperature.
DOI: 10.6084/m9.figshare.23521830
title: Foraging and reproductive success raw data from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: Raw data used for the analysis of foraging and reproductive success.
DOI: 10.6084/m9.figshare.23521830.v1
title: Foraging and reproductive success raw data from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: Raw data used for the analysis of foraging and reproductive success.
DOI: 10.6084/m9.figshare.23521833
title: Raw data of the mean laying date. from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: The raw data of the mean laying date at each site.
DOI: 10.6084/m9.figshare.23521833.v1
title: Raw data of the mean laying date. from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: The raw data of the mean laying date at each site.
DOI: 10.6084/m9.figshare.23521836
title: Code for foraging success data from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: Code used for the analysis of the foraging success data.
DOI: 10.6084/m9.figshare.23521836.v1
title: Code for foraging success data from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: Code used for the analysis of the foraging success data.
DOI: 10.6084/m9.figshare.23521839
title: Raw data of the number of chicks fledged. from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: The raw data of the number of chicks fledged at each site.
DOI: 10.6084/m9.figshare.23521839.v1
title: Raw data of the number of chicks fledged. from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: The raw data of the number of chicks fledged at each site.
DOI: 10.6084/m9.figshare.23521842
title: Code for reproductive success and sea surface temperature data from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: Code used for the analysis of reproductive success and sea surface temperature data.
DOI: 10.6084/m9.figshare.23521842.v1
title: Code for reproductive success and sea surface temperature data from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: Code used for the analysis of reproductive success and sea surface temperature data.
DOI: 10.6084/m9.figshare.23521845
title: Raw data of the sea surface temperature. from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: The raw data of the sea surface temperature at each site.
DOI: 10.6084/m9.figshare.23521845.v1
title: Raw data of the sea surface temperature. from Exploring subcolony differences in foraging and reproductive success and the influence of environmental conditions of a central place foraging bird

description: The raw data of the sea surface temperature at each site.
DOI: 10.5281/zenodo.8087732
title: Cosmic Explorer MPSAC Dataset

description: This dataset contains the compact binary populations that were used in the Cosmic Explorer MPSAC White paper<sup>1</sup> (submitted to the NSF MPSAC ngGW Subcommittee) and the accompanying technical paper<sup>2</sup>. <strong>Contents:</strong> 1. 1-year populations for binary black hole (BBH), binary neutron star (BNS), neutron star-black hole (NSBH), intermediate mass binary black hole (IMBBH), Population III (Pop 3) binary black holes and primordial black hole (PBH) mergers. It also contains the SNRs and measurement errors on intrinsic and extrinsic parameters calculated using gwbench<sup>3</sup>. 2. 1/4-year sub-population of BNS mergers for which errors on tidal parameters were calculated. 3. An ipython notebook (instructions.ipynb) that shows how the data can be used. <strong>References:</strong> 1. Evans, Matthew <em>et al.</em> Cosmic Explorer: A Submission to the NSF MPSAC ngGW Subcommittee (2023). arXiv: 2306.13745 [gr-qc]. 2. Gupta, Ish <em>et al. </em>Characterizing Gravitational Wave Detector Networks: From A<sup>#</sup> to Cosmic Explorer (2023). <em>In preparation.</em> 3. Borhanian, Ssohrab. GWBENCH: a novel Fisher information package for gravitational-wave benchmarking. Class. Quant. Grav. 38, 175014 (2021). arXiv: 2010.15202 [gr-qc].
DOI: 10.6084/m9.figshare.23536248
title: Apatite fission track (AFT) age, apatite (U/Th)-He (AHe) age and thermal modelling data for igneous bedrocks of the Wrangellia terrane on Vancouver Island, Canada

description: This file provides the detailed thermochronology ages and thermal modelling results for the manuscript - <em>Exhumation of Wrangellia on Vancouver Island, Canada during accretion processes as constrained by Low-Temperature Thermochronology</em>. Table S1. Apatite (U-Th)/He data. Dataset S1. Bedrock AFT data (Tables S2 to S13) Dataset S2. QTQt models for bedrock samples (Figures S1 to S12)
DOI: 10.25345/c57d2qj1x
title: MassIVE MSV000092292 - Physiological/hypertensive cardiac extracellular vesicles regulate fibroblast proteome in a sex dependent manner
title: The composition of cardiac EVs (cEVs) isolated from hypertensive mice and their capacity to reprogram cardiac fibroblasts was investigated using mass spectrometry-based proteomic profiling. Hypertensive and recovering cEVs displayed altered presence of proteins involved in peptidase activity, response to oxygen radical, and glycerolipid metabolism. Following their uptake to cardiac fibroblasts, cEV treatment from normotensive animals resulted in potent antifibrotic and prohomeostatic functions, with sex dependent differences in RNA splicing and energy metabolism proteins.Bioinformatic analysis of hypertensive-cEV remodelled fibroblasts revealed disease associated profibrotic signalling, and sex specific influences on components involved in antioxidant activity, RNA metabolism, fatty acid metabolism, and glycosylation processing. Moreover, investigation of temporal cEV signalling across hypertension and recovery revealed dynamic sex and disease dependent reprogramming of proteins related to RNA binding, interferon signalling, protein glycosylation, ECM regulation, signal transduction, and protein and energy metabolisms. We highlight the dynamic composition and signalling of cEVs in regulating fibroblast biology, reporting sex-dependent differences in cardiac physiology and hypertension.
DOI: 10.5281/zenodo.7683599
title: Dataset for MD and QM study of NarK nitrate/nitrite exchanger

description: MM_SMD_nark.tgz: input files, output files (less dcd files), and scripts of analysis for the MD simulations, PCA analyses, HOLE calculations. QM_nark.tgz: input and output files for QM model computations 2023_additional_smd.tgz: addition SMD calculations input files, output files (less dcd files). add_data_plot.tgz: new plots with data from additional SMD simulations
DOI: 10.5281/zenodo.7683600
title: Dataset for MD and QM study of NarK nitrate/nitrite exchanger

description: MM_SMD_nark.tgz: input files, output files (less dcd files), and scripts of analysis for the MD simulations, PCA analyses, HOLE calculations. QM_nark.tgz: input and output files for QM model computations
DOI: 10.5281/zenodo.8088630
title: Dataset for MD and QM study of NarK nitrate/nitrite exchanger

description: MM_SMD_nark.tgz: input files, output files (less dcd files), and scripts of analysis for the MD simulations, PCA analyses, HOLE calculations. QM_nark.tgz: input and output files for QM model computations 2023_additional_smd.tgz: addition SMD calculations input files, output files (less dcd files). add_data_plot.tgz: new plots with data from additional SMD simulations
DOI: 10.25345/c53n20q62
title: MassIVE MSV000092293 - intercardiac Phosphoproteome/proteome regulation of cardiomyocyte-fibroblast signaling
title: Secretome-mediated signaling from human iPSC-derived cardiomyocytes (TGF-beta induced dysfunction) to primary human cardiac fibroblasts was investigated to identify downstream regulators of fibrosis. Quantitative proteomic profiling revealed a dynamic reprogramming of fibroblast global proteome, with dysregulation of proteins implicated in extracellular matrix (ECM) remodelling, cytoskeleton organization, lysosome function, and oxidoreductase- and kinase activity. Protein modification-focused processing analyses of mass spectrometry proteome data further highlight phospho-proteome alterations in pro-fibrotic pathways regulated by kinases (CK2, CDK1, CDK2, MAPK1, PRKACA, PRKG1). We verified upregulated casein kinase 2 (CK2) substrate levels in secretome-treated fibroblasts, and pharmacological inhibition of CK2 using Tetrabromobenzotriazole significantly abrogated reactive oxygen species levels and activation state
DOI: 10.5281/zenodo.3367504
title: Effects of the compositional viscosity ratio on the long-term evolution of thermo-chemical reservoirs in the deep mantle

description: Datasets of the manuscript submitted to Geophysical Research Letters.
DOI: 10.5281/zenodo.3367503
title: Effects of the compositional viscosity ratio on the long-term evolution of thermo-chemical reservoirs in the deep mantle

description: Datasets of the manuscript submitted to Geophysical Research Letters.
DOI: 10.26036/cnp0004475
title: Transcriptome analysis in red panda

description: Transcriptome analysis revealing gene expression profiles in red pandas with high inbreeding coefficient
DOI: 10.5281/zenodo.8084708
title: Example ScRNAseq Dataset 3 for Learning Web-based Tools

description: This is one of the three example ScRNAseq datasets used to follow the guided example analyses within "A Guide to Single-Cell RNA Sequencing Analysis Using Web-based Tools for Non-Bioinformaticians" in the FEBS Journal. This dataset can be downloaded and imported into a variety of web-based tools and used as a learning device to gain more familiarity with the tools. As described in the paper, this dataset represents the treated sample (active agent and carrier).
DOI: 10.5281/zenodo.8084707
title: Example ScRNAseq Dataset 3 for Learning Web-based Tools

description: This is one of the three example ScRNAseq datasets used to follow the guided example analyses within "A Guide to Single-Cell RNA Sequencing Analysis Using Web-based Tools for Non-Bioinformaticians" in the FEBS Journal. This dataset can be downloaded and imported into a variety of web-based tools and used as a learning device to gain more familiarity with the tools. As described in the paper, this dataset represents the treated sample (active agent and carrier).
DOI: 10.26188/23591004
title: Effect of Transforming Growth Factor-beta 1 on the Rat Renal Mesangial Cell Transcriptome

description: Rat renal mesangial cells (SciencCell, #R4200) were grown to sub-confluence on poly-L-lysine coated flasks in mesgnaial cell medium (SciencCell, #R4201) supplemented with 2�S, growth supplement (SciencCell, #R4252) and pen/strep. Cells were quiesced for 48h and then treated for 24h with human recombinant TGF-beta 1 (5 ng/mL; Sigma#T7039) in complete media (n=4) or fresh media without growth factor (n=4). Total RNA was extraced from cell pellets using standard protocols. Whole RNA stranded libraries were prepared using Illumina's Ribo-zero Gold protocol and sequenced on an Illumina NovaSeq platform (150bp PE). After demultiplexing and quality control, the data was then processed through RNA-seq expression analysis workflow, which included trimming, alignment, transcript assembly, feature quantification and, differential expression analysis with edgeR (verison 3.38.4).
DOI: 10.26188/23591004.v1
title: Effect of Transforming Growth Factor-beta 1 on the Rat Renal Mesangial Cell Transcriptome

description: Rat renal mesangial cells (SciencCell, #R4200) were grown to sub-confluence on poly-L-lysine coated flasks in mesgnaial cell medium (SciencCell, #R4201) supplemented with 2�S, growth supplement (SciencCell, #R4252) and pen/strep. Cells were quiesced for 48h and then treated for 24h with human recombinant TGF-beta 1 (5 ng/mL; Sigma#T7039) in complete media (n=4) or fresh media without growth factor (n=4). Total RNA was extraced from cell pellets using standard protocols. Whole RNA stranded libraries were prepared using Illumina's Ribo-zero Gold protocol and sequenced on an Illumina NovaSeq platform (150bp PE). After demultiplexing and quality control, the data was then processed through RNA-seq expression analysis workflow, which included trimming, alignment, transcript assembly, feature quantification and, differential expression analysis with edgeR (verison 3.38.4).
DOI: 10.6084/m9.figshare.23591454
title: <strong>The Effect of Duloxetine on Female Sexual Functions in the Treatment of Stress Incontinence</strong>

description: The dataset of the manuscript of "<strong>The Effect of Duloxetine on Female Sexual Functions in the Treatment of Stress Incontinence"</strong>
DOI: 10.6084/m9.figshare.23591454.v1
title: <strong>The Effect of Duloxetine on Female Sexual Functions in the Treatment of Stress Incontinence</strong>

description: The dataset of the manuscript of "<strong>The Effect of Duloxetine on Female Sexual Functions in the Treatment of Stress Incontinence"</strong>
DOI: 10.17043/zeppelin-gramlich-2023-nascent-1
title: Chemical and physical properties of cloud residuals measured during the Ny-Ålesund Aerosol Cloud Experiment 2019 – 2020
DOI: 10.25919/97m9-4y47
title: Parkes observations for project P1165 semester 2023APRS_03

description: We carried out a pilot FAST survey at intermediate Galactic latitudes and discovered five new pulsars (including two millisecond pulsars, MSPs). We confirmed all five pulsars and timed two pulsars (J1826-0049 and J1849+1000) during the 2022OCTS semester. A coherent timing solution was obtained for J1826-0049 (4.59 ms) and it is in a 6.7-day orbit with a white dwarf companion. The other pulsar, J1849+1000, turned out to be potentially exotic. While its large spin period variation can be fitted by a 26-day circular orbit with a massive companion, the residuals show strong quasi-periodic variations, which suggest the existence of a third object in an inner orbit. If confirmed, J1849+1000 will be in a stellar triple system with an outer orbit of 26 days and an inner orbit of a few days. This makes it potentially a unique system for tests of gravitational theories and understanding the formation and evolution of triple systems. Here we propose to continue our timing of J1826-0049 and J1849+1000. The goal is to refine our measurement of the parameters of J1826-0049 and understand the nature of J1849+1000
DOI: 10.3886/e172902
title: Data and Code for: Job Search and Hiring with Limited Information about Workseekers' Skills

description: This project measures job search and hiring in Johannesburg, South Africa, between 2016 and 2017 using data from surveys of firms and workseekers, field experiments with workseekers, choice experiments with firms, and a correspondence study with job applications.<br>
description: Response Rates: 83-100% across different survey instruments.<br>
DOI: 10.3886/e172902v1
title: Data and Code for: Job Search and Hiring with Limited Information about Workseekers' Skills

description: This project measures job search and hiring in Johannesburg, South Africa, between 2016 and 2017 using data from surveys of firms and workseekers, field experiments with workseekers, choice experiments with firms, and a correspondence study with job applications.<br>
description: Response Rates: 83-100% across different survey instruments.<br>
DOI: 10.3886/e172902v2
title: Data and Code for: Job Search and Hiring with Limited Information about Workseekers' Skills

description: This project measures job search and hiring in Johannesburg, South Africa, between 2016 and 2017 using data from surveys of firms and workseekers, field experiments with workseekers, choice experiments with firms, and a correspondence study with job applications.<br>
description: Response Rates: 83-100% across different survey instruments.<br>
DOI: 10.15468/dl.x6zer4
title: Occurrence Download

description: A dataset containing 191859 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is herbario"
 ]
}

 The dataset includes 191859 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046235-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.swv6f9
title: Occurrence Download

description: A dataset containing 551216 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lacertidae"
 ]
}

 The dataset includes 551216 records from 1135 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060314-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f5t4dy
title: Occurrence Download

description: A dataset containing 131 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Akysis Bleeker, 1858"
 ]
}

 The dataset includes 131 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002935-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9e94pg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lapparantophiidae"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060322-210914110416597/datasets/export for details.
DOI: 10.15468/dl.np4ez2
title: Occurrence Download

description: A dataset containing 613525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Picea abies (L.) H.Karst.)",
 "HasCoordinate is true",
 "Geometry POLYGON ((25.280527 74.385866, 34 74.516506, 34 35.773364, 32.861584 35.588421, 26.375071 34.609982, 22.816449 34.504241, 13.627633 36.690862, 10.001544 38.719154, -0.356862 36.404548, -9.323257 35.627079, -12.292937 57.408982, 25.280527 74.385866))"
 ]
}

 The dataset includes 613525 records from 1089 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049366-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.