cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/x26nbkdjj3.1
title: Transcriptomics data on dual G9a and DNMT inhibition, using the proprietary drug CM-272, in the MO4 melanoma mouse model - INHIBITING HISTONE AND DNA METHYLATION IMPROVES CANCER VACCINATION IN AN EXPERIMENTAL MODEL OF MELANOMA. De Beck, et al.

description: This dataset contains transcriptomics data on dual G9a and DNMT inhibition in the MO4 melanoma mouse model, related to the original research manuscript: INHIBITING HISTONE AND DNA METHYLATION IMPROVES CANCER VACCINATION IN AN EXPERIMENTAL MODEL OF MELANOMA. De Beck, et al. - Submitted (a) Multiplex gene expression analysis on ex vivo tumor tissue. Tumors of MO4 tumor-bearing mice subjected to the CM-272 treatment regimen were resected at 706.9±193.8 mm3 tumor volume and subjected to multiplex gene expression analysis using the nCounter PanCancer Mouse Immune Profiling Panel on the nCounter MAX Analysis System. Sample annotation is provided in the annotation file. (b) MO4 cells were treated for 24 hours with 1µM CM-272 or vehicle before RNA was extracted for sequencing.
DOI: 10.17632/2bjxjrt4zf.1
title: (p)ppGpp controls stringent factors by exploiting antagonistic allosteric coupling between catalytic domains. Roghanian et al.

description: Data associated with "(p)ppGpp controls stringent factors by exploiting antagonistic allosteric coupling between catalytic domains". Uncut images of the TLC plates shown in Figures 2 and S4. Plates shown in Figures 2, 4, 5, S4, and S6. Uncut Western blot and SDS-PAGE from Figures 4 and S2, respectively.
DOI: 10.17632/db7ndh4zk9.1
title: The Influences of Fraud Diamonds on Academic Cheating: Study on Indonesian Undergraduate Student

description: SPSS
DOI: 10.17632/rhzwpbjxtc.1
title: Velocity data in two sharp bends on the Middle Yangtze River

description: We have invesitgated the 3D flow field in very large sharp bends of Middle Yangtze River (MYR) based on field measurements. We found that patterns of mean and secondary flows in sharp bends on MYR are similar as in smaller systems, and the reduced-order model of Blanckaert & de Vriend (2003, 2010) can resolve the flow field in river of this size, and thus this mode has been validated over the entire range of scales. The data here show the ADCP measured 3D velocities (X,Y,Z) at ten transects of the sharp bends of TG and ZZZ in the MYR.
DOI: 10.17632/3hnwxx5c2n.1
title: Data of Perceived risk, awareness of Vaccine COVID-19, and Intention to vaccinate

description: The first subdivision presents questions related to the perception of the risks posed by COVID-19, Vaccine COVID-19, and the trust of citizens with the intention to vaccinate. The second part gives information on the demographics of the citizen.
DOI: 10.17632/6pp5kc3x92.1
title: The naïve map of the 16th century roads in Spain

description: Shapefiles with the Spanish road network of the 16th century. The geographical projection used is that of the Forlani map (1560). The original sources are freely available on the Internet.
DOI: 10.17632/s8sp6bbgt5.1
title: Hard chairside reline material and cellulose nanocrystals

description: The purpose of this in vitro study was to evaluate the characterization and physical properties of hard chairside reline material modified with cellulose nanocrystals (CNC). One hard chairside reline material were tested: Soft-Comfort (SC), into which 0.25%, 0.5%, 0.75% or, 1.0% of CNC was incorporated; the control group had no CNC. Specimens were prepared and The Fourier Transform Infrared Spectroscopy (FTIR), Differential Scanning Calorimetry (DSC), Scanning Electron Microscopy (SEM), Vickers hardness (VH), surface roughness (SR), surface free energy (SFE) and were performed. The addition of CNCs at 0.5%, 0.75% and 1% into SC increased VH (One-Way ANOVA/Welch, Games-Howell post-hoc test, p=.000); 0.75% decrease SFE (One-Way ANOVA, Bonferroni post-hoc test, p= .028); 0.75% and 1% showed similar to control (One-Way ANOVA/Welch, Games-Howell post-hoc test, p =.019) on the SR.
DOI: 10.17632/vcn2hfhwvm.4
title: Genome Mining Data of Bacillus cabrialesii TE3T

description: This dataset contains (1) the Bacillus cabrialesii TE3T genome, (2) the Bacillus cabrialesii TE3T genome-mining results and (3) results and BGC sequences used to construct BGC networking of Bacillus cabrialesii TE3T BGCs through BiG-SCAPE.
DOI: 10.17632/smtxktdtfc.1
title: BXSB_mice_CD20_BZR_repertoire, Werner et al

description: We investigated if a short-term B cell depletion during the pre-clinical phase of SLE in BXSB mice influences the B cell receptor repertoire. We could show that male BXSB mice treated with an anti-CD20 monclonal antibody show reduced diversity for IgG VDJ recombinations. To perform this analysis Next Generation Sequencing was performed by on the Illumina MiSeq platform using a pair of overlapping paired-end reads (2x300 bp). 20 % PhiX was added for improved performance. Paired-end reads were merged with the IgRepertoireConstructor (Safonova et al., 2015). Read Quality was ensured by FASTQC quality analysis by MultiQC (Ewels et al., 2016). Molecular amplification fingerprinting (MAF) error correction was achieved with unique molecular identifiers (UMI) as part of the cDNA synthesis and Multiplex Primers. PCR sequencing errors were corrected by pattern matching and filtering sequences containing both UMIS and correcting sequencing errors without introducing bias to read counts. Sequences were separated according to the individual immunoglobulin specific primers (TAK_402, TAK_403, TAK_IgM, TAK_IgA) and VDJ annotation was conducted with the IMGT/HighV-QUEST service (Alamyar et al., 2012). Sequences using the IgM, IgG1/2 or IgA specific primer were further analyzed with ARGalaxy immune receptor pipeline (IJspeert et al., 2017). Folder contains final data analyzed by ARGalaxy
DOI: 10.17632/x7xgsjrbwk.1
title: congenital and bilateral dislocation of the knee

description: Clinical case of a new-born presented at delivery with a congenital and bilateral dislocation of the knee
DOI: 10.17632/w8wj72khys.1
title: Seasonal variation in SARS-CoV-2 transmission in temperate climates

description: # Data for Gavenciak et al.: Seasonal variation in SARS-CoV-2 transmission in temperate climates This is a snapshot of data from the https://github.com/gavento/covid_seasonal_Brauner and https://github.com/gavento/covid_seasonal_Sharma data&code repositories. ## Brauner/ folder Contains a snapshot of the data published in Brauner et al.: Inferring the effectiveness of government interventions against COVID-19 in the https://github.com/epidemics/COVIDNPIs repository under MIT licence. The data narrowed to temperate Europe was published in the https://github.com/gavento/covid_seasonal_Brauner repository inder MIT licence. ## Sharma/ folder Contains a snapshot of the data published in Sharma et al.: Understanding the effectiveness of government interventions in Europe’s second wave of COVID-19 in the https://github.com/MrinankSharma/COVID19NPISecondWave repository under MIT licence.
DOI: 10.17632/2wwzg4pb8n.3
title: Live Imaging of SARS-CoV-2 Infection in Mice Reveals that Neutralizing Antibodies Require Fc Function for Optimal Efficacy by Ullah et al_IMMUNITY-D-21-00378

description: Supplementary videos and raw data set for all the graphs shown in figures the manuscript titled "Live Imaging of SARS-CoV-2 Infection in Mice Reveals that Neutralizing Antibodies Require Fc Function for Optimal Efficacy" by Ullah et al_IMMUNITY-D-21-00378 Supplementary Video Legends: Video S1. Longitudinal Non-invasive Bioluminescence Imaging to Visualize SARS-CoV-2-nLuc Infection and Dissemination in K18-hACE2 Mice, Related to Figure 1. SARS-CoV-2-nLuc challenged mice were imaged daily in dorsal (d) and ventral (v) positions for 6 days using IVIS Spectrum to monitor virus spread in the whole body as well as neuroinvasion. Video S2. Tomographic Reconstruction of Lung Tissue Depicting SARS-CoV-2 Virions in Infected Cells, Related to Figure S2, panels B-D. Virus particles are found within membrane-enclosed exit compartments of two adjacent pulmonary capillary endothelial cells. The movie traverses the reconstructed volume to illustrate the compartments (red arrowheads) then increases in magnification to detail the virions within the compartments. Video S3. Cellular Overview and Tomogram of SARS-CoV-2 Infected Region in Lung Tissue with Alveolar Macrophages, Related to Figure S2, panels B-D. SARS-CoV-2 virions are found in regions containing identifiable immune cells. Movie begins with a large-field montaged overview, highlighting alveolar macrophages (blue), AT2 cells (green), AT1 cells (yellow) and pulmonary blood veins (red). The upper of two blood veins is detailed at higher magnification, showing 3 red blood cells (rbc) and the surrounding capillary endothelium. A region containing portions of two endothelial cells is selected for tomographic reconstruction, showing caveolae at the cell surfaces and localizing SARS-CoV-2 virions within cytoplasmic exit compartments. Video S4. Tomographic Reconstruction of SARS-CoV-2 Infected Brain Tissue Depicting Infected Neurons, Related to Figure S2, panel F. Virus particles are found within neurons, often appearing in linear groups within compartments bordering the edges of neuronal projections. The movie details the distinction between presumptive SARS-CoV-2 virions and typical synaptic neurotransmitter vesicles found in an adjacent synaptic terminal. Video S5. Tomographic Reconstruction of Mouse Testis Depicting SARS-CoV-2 Virions Within Sertoli Cells, Related to Figure S2, panel M. Virus particles are found within membrane-enclosed compartments of Sertoli cells. Additional material and structures coexist with the virions in these compartments, suggesting they may be defined as lysosomes. Presumptive SARS-CoV-2 virions can be discerned from the other structures.
DOI: 10.17632/7tnhcwykpc.1
title: Enhancing students’ digital competencies within the Employability module of the University of Europe’s skills-based curricula

description: The onset of the coronavirus has catalyzed an acceleration in the adoption of digital teaching practices that have been trending in Higher Education for over a decade. The most obvious of these has been the abrupt switch to online training. Given the speed at which this transition from in-person instruction has taken place, many instructors' natural first inclination has been to maintain teaching styles as similar as possible to those employed in person, including the traditional lecture format. However, a growing body of research is confirming what instructors across the educational spectrum are observing: namely, that student behaviour, the psychological effect of the medium, participation levels, attention span and learning outcomes online can vary widely from those demonstrated in traditional classroom settings. It is becoming increasingly clear that conditions such as "Zoom fatigue" are very real, and that, if teaching is to be effective, different methodologies based on digital learning experiences should be added to educators' repertoires that take the particular challenges and new opportunities of the online environment into consideration. This paper will examine how some of these new online-based methodologies and digital tools are being developed and introduced at the University of Europe within the undergraduate students' Employability module to enhance the student online experience as well as learning outcomes. The module spans three semesters; here the authors will focus on implementations within the first semester, Employability I: English and the second semester, Employability II: Soft Skills to nurture relevant skills and to ensure that learning environments remain fit-for-purpose for the digital age.
DOI: 10.17632/5h6n8wf3j7.1
title: Collated Summary of Articles on the Valley of Death

description: The data contains summaries of selected articles on Valley of Death (VoD). The summarized articles consist of scholarly papers, conference proceedings, and white papers. They were collected from ABI (Proquest), EBSCOHost, Scopus, ScienceDirect and Google scholar databases. They represent articles published between 2000 and 2020. Over 3000 articles were checked, but 300 of them were selected for second reading and summarization. Meanwhile, 128 articles found useful and relevant for VoD. These relevant articles were summarized based on these criteria: definition of VoD, perspective of VoD, causes of VoD, proposed solutions for VoD, context and industry. Furthermore, a list of VoD diagrams are presented in the data. There are 33 figures copied from the summarized articles. These figures show how VoD looks like across different schools of thought on VoD. The data also contains a reference list of summarized articles.
DOI: 10.17632/p45pfscm8n.1
title: 2015 Jakarta's Health Insurance Claim Data

description: There are four background variables available from the data: • Prov (f1): Provider: 1. Cipto Mangunkusumo general hospital, 2. Dharmais National Cancer Center, 3. Harapan Kita National Heart Center and 4. Harapan Kita Children and Mother hospital. • LofB (f2): Line of Business: 1. PBI (Funded by Government) 2. PPU (Employee obligation) 3. PBPU (Other sources) • MedBen (f3): Type of Medical Benefit: 1. Procedure, 2. Non-procedure, 3. Maternity • Resint (f4): Resource intensity: 1. Low, 2. Medium, 3. High, 4. Outpatient Claim was transformed to log claim and currency was converted to Canadian dollar with currency rate on September 1, 2018.
DOI: 10.17632/6bmzv5wjk3.3
title: Repositorio - EFEITOS NO POTENCIAL HIDRÁULICO PELO SEQUESTRO DE CARBONO A PARTIR DA TRANSPIRAÇÃO PELAS PLANTAS - UMA ABORDAGEM PEDAGÓGICA

description: Material suplementar do estudo submetido ao XXIV Simpósio Brasileiro de Recursos Hídricos.
DOI: 10.17632/ff6t85jmwg.1
title: Chlamydia and HLA

description: This database consists of the articles reviewed in the paper "Chlamydia trachomatis and the HLA involvement in the development of the infection and disease: a systematic review".
DOI: 10.17632/786mjrhk69.1
title: Yellowstone Lake cutthroat trout fecundity data

description: Kaeding, L. R., and T. M. Koel. 2011. Age, growth, maturity, and fecundity of Yellowstone Lake Cutthroat Trout. Northwest Science 85:431–444. These are the Yellowstone cutthroat trout (Oncorhynchus clarkii bouvieri) fecundity data from this study.
DOI: 10.17632/dcpc5m8jy3.1
title: EFA and CFA on Perception and Advertising Media for Celebrity Endorsement

description: This data provides India rural consumer's perception about celebrity endorsement and also advertising media that is more convenient to receive a endorsement message from the celebrity.
DOI: 10.17632/zw9yxyk9b7.1
title: The Feature of Cervical Microbiota Associated with the Progression of Cervical Cancer among Reproductive Females

description: In companion paper，we revealed the cervical microbiota diversity and relative abundance in reproductive-age women from HPV infection to cervical cancer. We also identified marker genera of different groups and predicted its functional capabilities which will be helpful for diagnosis, prevention and treatment.
DOI: 10.17632/drz4hrp7bb.1
title: Yellowstone Lake cutthroat trout scale-age data

description: Kaeding, L. R., and T. M. Koel. 2011. Age, growth, maturity, and fecundity of Yellowstone Lake Cutthroat Trout. Northwest Science 85:431–444. These include the data summarized in Figure 6. Box plots of the total lengths of scale-based age-2 and age-3 Yellowstone cutthroat trout in 29 annual gillnet catches from Yellowstone Lake, 1969–2003.
DOI: 10.17632/f3zr6wz2xf.1
title: student teachers' issues and solutions

description: this dataset contains instruments for collecting data and data coding analysis used in the research.
DOI: 10.17632/wrww8jbd9g.1
title: Data for Fiscal Independence and Political Development

description: These data and programs replicate the accompanying paper "Fiscal Independence and Political Development." The data are provided in Excel and Stata formats. Instructions for replicating the main results of the manuscript, other results mentioned in the manuscript, and the Online Appendix, are provided.
DOI: 10.17632/5txnsph8f7.1
title: SUPPLEMENTARY MATERIAL: Droughts in São Paulo: Challenges and Lessons for A Water-Adaptive Society

description: This document and dataset present the description about equations and assumptions regarding the data presented in the manuscript Droughts in São Paulo: Challenges and Lessons for A Water-Adaptive Society (Souza et al, 2021). For further information, please contact Felipe Souza.
DOI: 10.17632/4jv2wmwrc5.1
title: Cardano Throughput and Stake Pool Sizes

description: Context: This data set contains information on the load and the number of active stake pools on the Cardano proof-of-stake blockchain platform between 29/07/2020 and 07/08/2021. The information was extracted from Cardano using the Cardano DB Sync tool. Content: - `date`: The date the measurements refer to - `avg_tps`: The average transactions per second observed during the 24 hour period - `cumulative_added`: The total cumulative number of stake pools added during this period and all previous periods - `cumulative_removed`: The total cumulative number of stake pools removed during this period and all previous periods - `total`: The total number of stake pools active during this period
DOI: 10.17632/xrb5b2642r.2
title: Results of GC–MS analysis of volatiles extracted by mechanical shock crushing from minerals in MAR

description: The data represent the results of the study of the composition of fluid inclusions in sulfides, anhydrites, and carbonates from sulfide and carbonate structures of hydrothermal fields of the Atlantic Ocean (Ashadze-1, Semenov-2, Krasnov, Rainbow, and Lost City), using pyrolysis-free gas chromatography-mass spectrometry.
DOI: 10.17632/t2bdr663ms.1
title: QR-DN1.0: A new Distorted and Noisy QRs dataset

description: Barcodes are playing a significant role in different industries in the recent years and among the two most popular 2D barcodes, the QR code has grown exponentially. The QR-DN1.0 dataset includes 5 categories of QR codes that will cover low to high density levels. Each group has 15 QR codes: 5 images for testing and 10 images for training. After embedding the QRs into 30 color images using blind watermarking techniques and then extracting the QRs from the images taken with the mobile phone camera with three different methods, we will have three groups of 2250 extracted QR images, which provides a total of 6750 distorted and noisy QR images. In each of the mentioned three categories, the data is divided into two parts: testing, with 750 images, and training, with 2250 images. For every distorted QR in the dataset, a non-distorted instance of it is placed as a ground truth. One of the advantages of this data set is that it is real. Because no simulated noise has been added to the images and this dataset is completely derived from the real word challenge of extracting embedded QRs in color images captured from the watermarked image on the screen. It also includes various types of QRs such as single character, short sentence, long sentence, URL and location.
DOI: 10.17632/wgpsd9yyk2.1
title: Proneural genes define ground state rules to regulate neurogenic patterning and cortical folding

description: This data-set contains uncropped western blot images for Han et al. 2021 Figure 2G: Western blots of co-immunoprecipitation (Co-IP) of Ascl1 with Flag-Neurog2 IP with or without DNase I treatment in vitro (X-ray film). Figure 7B: Western blots of Notch intracellular domain (NICD) levels for FACS sorted E12.5 CD15+ pro-, Neurog2+, Ascl1+ and double+ cortical NPCs (X-ray film). Figure 7C: Western blots of NICD levels in P0 control and split-Cre;Rosa-DTA cortices (Bio-rad gel doc with GelCapture MicroChemi 2.2.0.0 software).
DOI: 10.17632/gh9ynp4n49.1
title: Data Set on Role Demand Management among Academic Staff in Selected Nigerian University: The Eustress Perspective.

description: These data explore the concept of eustress in enhancing the performance of academic staff. This is very germane considering the fact that Eustress is viewed as a valid concept that facilitates the development of a positive emotional state, enhances employee ability to make more novel connections and associations between ideas and creativity thereby improving productivity This data shows the significance of role demand management which comprised skill discretion, meaningfulness, challenging task, management support, and time management significantly influence and enhances the performance of academics. The results can enhance quality teaching research and community impact among academic staff thereby accelerating the attainment of world-class stutus. 1. Data The data for this research was gathered from Data was obtained from structured questionnaires administered to academic staff across six universities in Nigerian, University of Ibadan, University of Lagos, Covenant University, Babcock University, Lagos State University and Ladoke Akintola University. The study adopted a mixed method to elicit information from the sampled 444 respondents and twelve in-depth interviews were also conducted. Descriptive and inferential research methods were used for the analysis. The quantitative data were analyzed using Partial Least Square – Structural Equation Modeling (PLS-SEM), while the qualitative data were subjected to manual thematic analysis. 2. Experimental Design, Materials and Methods 2.1 Data collection Data was collected through the administration of structured copies of the questionnaire to all academic staff in six universities across three states that are top ranking in Nigeria (2020 NUC Ranking) with teaching effectiveness, research and publication output, student enrolment, feasibility, student performance, quality graduate, technology, conducive learning environment, community service as indices for performance ranking amongst others (NUC, 2020). These are: University of Ibadan, Oyo State, University of Lagos, Lagos State, Covenant University, Ogun State, Babcock University, Ogun State, Lagos State University, Lagos State and Ladoke Akintola University of Technology, Oyo State. Emphasis was placed on six universities which are the first two top ranking public universities, the first two top ranking private universities and the first two top ranking state universities in terms of performance according to 2020 NUC Ranking. The emphasis on the academic staff of the organization was founded on the fact that academic staff of any university are the foremost crop of work force that drive performance hence, the concept of eustress may be more applicable to them. Regression analysis was employed to test the hypothesis stated. Eustress was measured using role demands management. Academic staff performance was assessed using a community service engagement. Responses ranged by 5-point Likert scaling from 1= “Strongly disagree” to 5= “Strongly agree.
DOI: 10.17632/my928cxv7f.3
title: High Resolution Comparison of Cancer Samples Through Trajectory Alignment

description: Bone marrow samples of healthy individuals and AML patients at diagnosis and 14 days after treatment.
DOI: 10.17632/hdhcsyvjbh.1
title: Raw EMG data recorded from biceps femoris muscle of the rats

description: Raw EMG data recorded from biceps femoris muscle of the rats
DOI: 10.17632/tm793rfgh4.1
title: Code for "Computational analysis of pathological image enables interpretable prediction for microsatellite instability"

description: The Python and R source code for reproducing the result in "Computational analysis of pathological image enables interpretable prediction for microsatellite instability"