cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23654292.v1
title: National conversion risk assessment for Indigenous Peoples’ lands

description: Land conversion from industrial development poses significant threats to Indigenous Peoples’ lands around the world. To describe the situation globally, we conducted a global conversion risk assessment that utilizes published datasets that represent Indigenous Peoples’ lands, their current ecological condition, future industrial development pressures, and underlying vulnerability to conversion. <br> To assess conversion vulnerability, we developed a global composite index comprised of national socio-economic and political indicators called the RRC Index. The RRC Index is comprised of indicators that measure the strength and security of Indigenous Peoples’ rights to their territories and resources (R), their opportunities for representation and engagement in the decisions impacting them (R), and the capital available to support conservation and sustainable development (C). Interpretation of the RRC Index and its sub-components can aid in the identification of vulnerabilities related to the rights and representation of Indigenous Peoples in decisions impacting their territories and resources, and the capital available to support them. Reciprocally, these vulnerabilities can also suggest potential strategies and actions that might be taken to bolster Indigenous Peoples’ voices, leadership, and agency as they face industrial development worldwide. <br> This data table provides country-level summaries of the data used in our conversion risk assessment, including the total area of each country recognized as Indigenous Peoples’ lands; the total area with high industrial development pressures; sector-specific breakdowns for agriculture, mining, oil and gas, renewables, and urbanization; majority drivers of high development pressure; and conversion threat, vulnerability and risk scores, ranks, and categories.
DOI: 10.6084/m9.figshare.25591131.v1
title: Letter Positional Probability Data - Four Datasets

description: Letter positional probability data for four datasets.
DOI: 10.6084/m9.figshare.3568872.v1
title: Appendix F. Aboveground structural attributes of 140 trees.

description: Aboveground structural attributes of 140 trees.
DOI: 10.6084/m9.figshare.20681575.v1
title: Data from: Peptide OA-VI12 restrains excessive melanogenesis in vitro and in vivo via the miR-122-5p/MITF/TYR axis

description: Ear tissues of C57B/6 mice from the Control, Model, and OA-VI12 groups were removed, and total RNA (three cases in each group) was extracted and sent to Beijing Guoke Biotechnology Co., Ltd. (China) for miRNA sequencing. Differential expression analysis of two conditions/groups was performed using the DESeq R package. The resulting <em>p</em>-values were adjusted using Benjamini-Hochberg correction to control the false discovery rate (FDR). Genes with an adjusted <em>p</em>-value &lt; 0.01 and absolute value of log2(fold-change) &gt; 1 were considered differentially expressed. The ClusterProfiler R package was used to identify significantly enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways (http://www.genome.jp/kegg/) compared to the entire genome background. <strong>All.DEG_final_anno.xls：</strong> All differential miRNA expression + differential information + target gene annotation results of each database <strong>miRNA_expression.xls</strong>: expression amount files of all miRNAs <strong>miRNA_counts.xls</strong>: Count files of all miRNAs <strong>All.DEG_final_target.xls</strong>: Predicted target files for all miRNAs
DOI: 10.15468/dl.9rt5z5
title: Occurrence Download

description: A dataset containing 2521669 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is China",
 "HasCoordinate is true",
 "Year 2018-2023"
 ]
}

 The dataset includes 2521669 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013505-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.831465.v1
title: EUROHYDROS H2 isotope results: mixing ratio and deuterium content time series at six stations

description: These are the H2 mixing ratio and deuterium content data used in: Batenburg, A. M., Walter, S., Pieterse, G., Levin, I., Schmidt, M., Jordan, A., Hammer, S., Yver, C., and Röckmann, T.: Temporal and spatial variability of the stable isotopic composition of atmospheric molecular hydrogen: observations at six EUROHYDROS stations, Atmos. Chem. Phys., 11, 6985-6999, doi:10.5194/acp-11-6985-2011, 2011,http://www.atmos-chem-phys.net/11/6985/2011/acp-11-6985-2011.html Please cite this ACP article when using these data in a publication, and kindly notify me. In the CSV files: - Mixing ratios are reduction gas analyzer results obtained at UHEI-IUP, MPI-BGC and LSCE. - dD(H2) data are obtained from analysis with the GC-IRMS system at the IMAU-APCG lab of Utrecht University. The estimated standard deviation/error in a single measurement is 4.5 permil, based on measurements of a laboratory working tank. - Outlier selection was based on visual inspection of the time series. - The "biased" or "downshifted" flag indicates dD measurements performed in a period where the dD results seemed to have a positive bias of approximately 9.5 permil. These samples were shown in the time series figure with the 9.5 permil subtracted, but excluded from the following quantitative analyses. - The last column indicates the number of succesfull repeat measurements of dD. More information can be found in the published, open-access article. Please do not hesitate to contact me if you have any questions.
DOI: 10.6084/m9.figshare.22082039.v2
title: MPAS-data.zip

description: MPAS model outputs <br>
DOI: 10.6084/m9.figshare.19777918.v1
title: 1979-2014 SDWACCM data

description: The data format is latitude * altitude * time（day）。 <br>
DOI: 10.6084/m9.figshare.25893928.v1
title: Germline missense MUTYH Benign variants

description: Molecular dynamics simulation of the benign variants based on the ClinVar, COSMIC, and various in silico methods, the simulation is up to 100 ns.
DOI: 10.6084/m9.figshare.25648650.v1
title: genetic_map_hg38_withX.txt

description: temp
DOI: 10.6084/m9.figshare.5644768.v1
title: BIOGAS PRODUCTION IN DAIRY CATTLE SYSTEMS, USING BATCH DIGESTERS WITH AND WITHOUT SOLIDS SEPARATION IN THE SUBSTRATES

description: ABSTRACT This research aimed to evaluate the biogas production during the anaerobic biodigestion process of dairy cattle manure, with and without solids separation. Sixteen biodigesters of the batch type were used, each one with 2L of capacity, supplied with manure in four different conditions: (1) pure manure, after washing the floors of the free stall system; (2) manure after the solids separator; (3) manure after the solids separator and sand decanter and (4) manure with the solid retained in separator solids, dissolved in water. The hydraulic retention time was of 196 days. The highest reductions of volatile solids (VS) were obtained for the biodigesters supplied with manure that went through some process of solids separation. The highest potential of methane production(CH4) obtained was of 0.2686 m³ CH4 kg −1 of added VS, supplied to digesters with manure after solids separator. The best potential for biogas and methane production was observed when there was a reduction of the solids concentration in the manure and, in this case, the hydraulic retention time can be reduced, which reduces the volume of the biodigester and the cost of implementation and maintenance, but the highest biogas production occurred in the biodigesters without solids separation.
DOI: 10.6084/m9.figshare.5436763.v1
title: S5 File from Non-adaptive origins of evolutionary innovations increase network complexity in interacting digital organisms<sup>†</sup>

description: 32-instruction set.
DOI: 10.6084/m9.figshare.25879186.v1
title: Subdialy, daily and monthly weather data for the year 1740

description: Subdialy, daily and monthly weather data covering the year 1740. All data are formatted in the Station Exchange Format SEF (https://boris-portal.unibe.ch/bitstream/20.500.12422/112/3/SEF_1.0.0.html).
DOI: 10.6084/m9.figshare.8218670.v1
title: nonlinear-16-grams-number

description: 16-grams
DOI: 10.25573/data.28046414.v2
title: The end-Cretaceous mass extinction restructured functional diversity but failed to configure the modern marine biota

description: The end-Cretaceous (K-Pg) mass extinction shows how large-scale taxonomic loss affects functional diversity over short and long timeframes. In a macroevolutionary model system, we find that, despite losing ~60% of genera and ~20% of family-level diversity, marine bivalves lost only ~5% of their functional diversity, inconsistent with random extinction. Even with evolutionary opportunities presented by a disrupted ecosystem, low-diversity groups prior to the extinction or those originating in the Cenozoic rarely reach higher ranks today, implying long-term diversity ceilings to certain ecological roles. Clades that survived the extinction tend to dominate functions today, 66 million years post-extinction, but both relative richness and phylogenetic structure of those functional groups have been significantly shuffled. Thus, neither the composition of the pre-extinction biota nor the set of taxa that survived the extinction fully accounts for the functional and phylogenetic structure of today’s biota. The extinction disrupted Mesozoic biodiversity but did not fully determine the present-day configuration.
DOI: 10.6084/m9.figshare.5858211.v1
title: Spatial and temporal intercomparison of four global burned area products

description: We characterize the agreement and disagreement of four publically available burned products (Fire CCI, Copernicus Burnt Area, MODIS MCD45A1, and MODIS MCD64A1) at a finer spatial and temporal scale than previous assessments using a grid of three-dimensional cells defined both in space and in time. Our analysis, conducted using seven years of data (2005–2011), shows that estimates of burned area vary greatly between products in terms of total area burned, the location of burning, and the timing of the burning. We use regional and monthly units for analysis to provide insight into the variation between products that can be lost when considering products yearly and/or globally. Comparison with independent, contemporaneous MODIS active fire observations provides one indication of which products most reasonably capture the burning regime. Our results have implications for the use of global burned area products in fire ecology, management and emissions applications.
DOI: 10.6084/m9.figshare.26295760.v1
title: USA Film Box Office Study

description: This database contains film and production data for USA films from 1999-2020.
DOI: 10.6084/m9.figshare.8313386.v4
title: Runners Achilles Tendon Intra-tendinpus Morphology.xlsx

description: We provided the intra-tendinous morphology data from ultrasound imaging. The runners' demographics, running history, body measures, and clinical measures (endurance and flexibility) was also provided.
DOI: 10.6084/m9.figshare.13207604.v1
title: Keteleeria davidiana var. calcarea.zip

description: Maximum likelihood phylogenomic tree inferred from <i>K. calcarea</i> and other 19 species within Pinaceae and one out group species (<i>E. foeminea</i>) using complete chloroplast genomes.
DOI: 10.6084/m9.figshare.21968507.v3
title: Páramo bird and vegetation dataset

description: Formatted dataset used for analyses presented in MS: Biodiversity losses from grazing of high Andean páramo.
DOI: 10.6084/m9.figshare.25139816.v1
title: Transkrip Bahasa Indonesia New

description: transkrip bahasa Indonesia
DOI: 10.5281/zenodo.15568939
title: Glacial Lakes and GLOFs in a Warming Himalaya: Current Understanding, Challenges, and the Way Forward

description: This review presents the first comprehensive synthesis of glacial lake outburst floods (GLOFs) across the Himalayan region that integrates spatial patterns, lake typology, triggering mechanisms, and social vulnerability into a unified framework. While prior studies have focused on individual basins or events, our contribution stands out by systematically analyzing more than 388 GLOF events and over 19,000 glacial lakes, revealing overlooked trends—such as the dominance of ice-dammed lake GLOFs in the Karakoram and the underrepresentation of socio-environmental risks in existing assessments. By critically evaluating current research gaps and highlighting the urgent need for community-based mitigation, this work not only advances cryosphere hazard understanding but also addresses its real-world implications under accelerating climate change. Given the transboundary relevance and growing global concern over high mountain hazards, the study holds strong international significance and is well aligned with Catena’s focus on earth surface processes and environmental risk.
DOI: 10.5281/zenodo.15568940
title: Glacial Lakes and GLOFs in a Warming Himalaya: Current Understanding, Challenges, and the Way Forward

description: This review presents the first comprehensive synthesis of glacial lake outburst floods (GLOFs) across the Himalayan region that integrates spatial patterns, lake typology, triggering mechanisms, and social vulnerability into a unified framework. While prior studies have focused on individual basins or events, our contribution stands out by systematically analyzing more than 388 GLOF events and over 19,000 glacial lakes, revealing overlooked trends—such as the dominance of ice-dammed lake GLOFs in the Karakoram and the underrepresentation of socio-environmental risks in existing assessments. By critically evaluating current research gaps and highlighting the urgent need for community-based mitigation, this work not only advances cryosphere hazard understanding but also addresses its real-world implications under accelerating climate change. Given the transboundary relevance and growing global concern over high mountain hazards, the study holds strong international significance and is well aligned with Catena’s focus on earth surface processes and environmental risk.
DOI: 10.6084/m9.figshare.14782290.v1
title: zhang et al 2021

description: Supplementary Information is available for this paper.
DOI: 10.6084/m9.figshare.19390676.v1
title: Supporting material for Single cell RNAseq complexity reduction chapter

description: Two exemplary datasets (RNA-5c, RNA-5c-lowH1975) are available. Both datasets include the human lung adenocarcinoma cell lines A549, H1975, H2228, H838, and HCC827. RNA-5c, RNA-5c-lowH1975 are derived from GEO repository ID: GSM3618014. Both dataset count tables have associated with cell names and cell lines, e.g. Lib90_00000.HCC827, Lib90_00002.H838. RNA-5c includes 1242 cells of A549, 436 cells belong to H1975, 749 cells of H2228, 879 cells belong to H838, and 598 cells of HCC827 cells. To draw attention to a dataset characterized by a cell population down represented, the dataset RNA-5c-lowH1975 is created. RNA-5c-lowH1975 includes all the RNA-5c cells but only 50 cells of H1975 cells. @font-face {font-family:Helvetica; panose-1:0 0 0 0 0 0 0 0 0 0; mso-font-charset:0; mso-generic-font-family:auto; mso-font-pitch:variable; mso-font-signature:-536870145 1342208091 0 0 415 0;}@font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-536869121 1107305727 33554432 0 415 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; mso-pagination:widow-orphan; font-size:12.0pt; font-family:"Times New Roman",serif; mso-fareast-font-family:"Times New Roman";}a:link, span.MsoHyperlink {mso-style-priority:99; color:#0563C1; mso-themecolor:hyperlink; text-decoration:underline; text-underline:single;}a:visited, span.MsoHyperlinkFollowed {mso-style-noshow:yes; mso-style-priority:99; color:#954F72; mso-themecolor:followedhyperlink; text-decoration:underline; text-underline:single;}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-family:"Calibri",sans-serif; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:Calibri; mso-fareast-theme-font:minor-latin; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi; mso-fareast-language:EN-US;}div.WordSection1 {page:WordSection1;}
DOI: 10.6084/m9.figshare.27221421.v1
title: Genome annotation of the Naozhou population of large yellow croaker

description: In China, the large yellow croaker is divided into three populations: the Daiqu population, the Naozhou population, and the Min-Yue-East population. For the first time, we are releasing the genome annotation of the Naozhou group large yellow croaker .
DOI: 10.15468/dl.5qxhvx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leptoderma macrops Vaillant, 1886",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((7.9237 1.4388,7.9186 1.8496,6.9096 1.8496,6.7752 1.3312,7.0614 0.9078,7.5027 0.9107,7.9237 1.4388))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013523-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.4868093.v2
title: Gene Expression Atlas of Schistosoma Mansoni - Part I

description: This data set (part I of two) was obtained from the RNA-Seq analysis of transcriptomes of adult <i>Schistosoma mansoni </i>and their gonads. All genes represented by transcripts identified in the analysis were given by their Smp numbers. In addition to the average transcript amounts (Reads per Kilobase Million (RPKM), Y-axis) and occurrence, log<sub>2</sub> ratios were given as well as adjusted <i>P</i> values of pairing-, gender,- and tissue-related expression patterns.Custom codes to generate the data are given in a separate file. <br>Abbreviations used for the bar plots (X-axis) are:<br>bM (bisex males), paired males; sM (single-sex males), unpaired males; bF (bisex females), paired females; sF (single-sex females), unpaired females; bT, testis of bM; sT, testis of sM; bO, ovary of bM; sO, ovary of sO. <br>
DOI: 10.6084/m9.figshare.5946496.v2
title: Data Accessibility: Agricultural adapters from the vineyard landscape impact native oak woodland birds

description: Data accessibility<br>
DOI: 10.6084/m9.figshare.13560281.v4
title: An Open Dataset for Wearable SSVEP-Based Brain-Computer Interfaces

description: The brain-computer interfaces (BCIs) provide humans a new communication channel by encoding and decoding brain activities. Steady-state visual evoked potential (SSVEP)-based BCI stands out among many BCI paradigms because of its non-invasiveness, little user training, and high information transfer rate (ITR). However, the use of conductive gel and bulky hardware in the traditional Electroencephalogram (EEG) method hinder the application of SSVEP-based BCIs. Besides, continuous visual stimulation in long time use will lead to visual fatigue and pose a new challenges to the practical application. This study presents an open dataset collected with a wearable SSVEP-based BCI system that compared wet and dry electrodes comprehensively with continuous recording of multiple sessions. The dataset consists of 8-channel SSVEP data from 102 healthy subjects while they performed a cue-guided target selecting task with a 12-target SSVEP-based BCI. For each subject, wet and dry electrodes were used to record 10 consecutive blocks respectively in an overall duration of around two hours. The dataset can be used to evaluate the performance of wet and dry electrodes in SSVEP-based BCIs. The dataset also provide sufficient data for developing new target identification algorithms to improve the performance of wearable SSVEP-based BCIs.<br>
DOI: 10.6084/m9.figshare.5951854.v1
title: HFA_Group_2.matASD and TD eye movement dataset in visual orienting task

description: data for <b>Automatic Classification of Children with Autism Spectrum Disorder by Using a Computerized Visual Orienting Task</b>
DOI: 10.6084/m9.figshare.26513233.v2
title: <b>Source data</b>

description: G protein-coupled receptors (GPCRs) are key pharmacological targets, yet many remain underutilized due to unknown activation mechanisms and ligands. Orphan GPCRs, lacking identified natural ligands, are a high priority for research, as identifying their ligands will aid in understanding their functions and potential as drug targets. Most GPCRs, including orphans, couple to G<sub>i/o/z</sub> family members, however current assays to detect their activation are limited, hindering ligand identification efforts.We introduce G<sub>Z</sub>ESTY, a highly sensitive, cell-based assay developed in an easily deliverable format designed to study the pharmacology of G<sub>i/o/z</sub>-coupled GPCRs and assist in deorphanization. We optimized assay conditions and developed an all-in-one vector employing novel cloning methods to ensure the correct expression ratio of G<sub>Z</sub>ESTY components. G<sub>Z</sub>ESTY successfully assessed activation of a library of ligand-activated GPCRs, detecting both full and partial agonism, as well as responses from endogenous GPCRs. Notably, with G<sub>Z</sub>ESTY we established the presence of endogenous ligands for GPR176 and GPR37 in brain extracts, validating its use in deorphanization efforts. This assay enhances the ability to find ligands for orphan GPCRs, expanding the toolkit for GPCR pharmacologists.
DOI: 10.6084/m9.figshare.5705968.v1
title: Manual nerve tracing files

description: These are the raw manual nerve tracing files corresponding to the subbasal nerve plexus mosaics of the same name. The files are in 'ndf' format, suitable for opening with the NeuronJ plugin to ImageJ. The nerve tracings can be used to generate nerve parameter data from within ImageJ/NeuronJ, or by analyzing with other algorithms.
DOI: 10.6084/m9.figshare.28596743.v1
title: Person in Hiding Data Set

description: Data set to support Person in Hiding paper<b>:</b> A scoping review evaluation of the formal curricula of healthcare-students for guidance on person-centred care.
DOI: 10.4121/uuid:91978ed6-1f6f-49fd-adde-f8bd2c072be6
title: Scripts from the article "Epidemics as an adaptive driving force determining lifespan setpoints"

description: A collection of scripts used in the paper "Epidemics as an adaptive driving force determining lifespan setpoints"
DOI: 10.6084/m9.figshare.25018244.v1
title: Supplemental data for "<b>Serum Chemerin levels correlate with the severity of dysglycemia in young adult women with polycystic ovary syndrome</b>"

description: · High serum chemerin levels are seen in dysglycemic PCOS alone, not in all PCOS· Serum Chemerin correlated positively with Body fat (%), not waist girth or BMI· Serum Chemerin correlated positively with HOMA-IR and negatively with HOMA-2β· Chemerin &gt;309.3 ng/ml clearly differentiated PCOS with T2D from those without· A substantial agreement existed between the Chemerin cut off and 2hPGPG&gt;200 mg/dL<br>