cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13311309
title: Additional file 3 of Differential gene expression analysis reveals pathways important in early post-traumatic osteoarthritis in an equine model

description: Additional file 3. Hierarchical listing of overrepresented gene ontology (GO) terms. Different tabs in the spreadsheet correspond to the categories of Biological Process, Molecular Function, and Cellular Component.
DOI: 10.6084/m9.figshare.13311306.v1
title: Additional file 2 of Differential gene expression analysis reveals pathways important in early post-traumatic osteoarthritis in an equine model

description: Additional file 2. Genes differentially expressed with a fold-change (FC) cut-off &gt; |1.1|. Genes upregulated in OA samples are represented by a positive FC; genes downregulated in OA samples are represented by a negative FC.
DOI: 10.6084/m9.figshare.13311315
title: Additional file 5 of Differential gene expression analysis reveals pathways important in early post-traumatic osteoarthritis in an equine model

description: Additional file 5. Genes falling within pathways identified as enriched by Reactome analysis.
DOI: 10.6084/m9.figshare.13311318.v1
title: Additional file 6 of Differential gene expression analysis reveals pathways important in early post-traumatic osteoarthritis in an equine model

description: Additional file 6. DE genes assigned to clusters by STRING using a MCL algorithm. Functional annotation of clusters with 10 or more genes was performed based on GO-Biological Process ontology in PANTHER.
DOI: 10.6084/m9.figshare.13311309.v1
title: Additional file 3 of Differential gene expression analysis reveals pathways important in early post-traumatic osteoarthritis in an equine model

description: Additional file 3. Hierarchical listing of overrepresented gene ontology (GO) terms. Different tabs in the spreadsheet correspond to the categories of Biological Process, Molecular Function, and Cellular Component.
DOI: 10.6084/m9.figshare.13311357.v1
title: Additional file 3 of Female university students’ preferences for different types of sexual relationships: implications for gender-based violence prevention programs and policies

description: Additional file 3: Group 2 dataset.
DOI: 10.6084/m9.figshare.13311357
title: Additional file 3 of Female university students’ preferences for different types of sexual relationships: implications for gender-based violence prevention programs and policies

description: Additional file 3: Group 2 dataset.
DOI: 10.6084/m9.figshare.13311360
title: Additional file 4 of Female university students’ preferences for different types of sexual relationships: implications for gender-based violence prevention programs and policies

description: Additional file 4: Group 3 dataset.
DOI: 10.6084/m9.figshare.13311360.v1
title: Additional file 4 of Female university students’ preferences for different types of sexual relationships: implications for gender-based violence prevention programs and policies

description: Additional file 4: Group 3 dataset.
DOI: 10.6084/m9.figshare.13311354
title: Additional file 2 of Female university students’ preferences for different types of sexual relationships: implications for gender-based violence prevention programs and policies

description: Additional file 2: Group 1 dataset.
DOI: 10.6084/m9.figshare.13311354.v1
title: Additional file 2 of Female university students’ preferences for different types of sexual relationships: implications for gender-based violence prevention programs and policies

description: Additional file 2: Group 1 dataset.
DOI: 10.6084/m9.figshare.13311363
title: Additional file 5 of Female university students’ preferences for different types of sexual relationships: implications for gender-based violence prevention programs and policies

description: Additional file 5: Group 4 dataset.
DOI: 10.6084/m9.figshare.13311363.v1
title: Additional file 5 of Female university students’ preferences for different types of sexual relationships: implications for gender-based violence prevention programs and policies

description: Additional file 5: Group 4 dataset.
DOI: 10.6084/m9.figshare.13309469
title: 2020 01 23 Field Notes

description: Field notes including image and/or video records.<br>The large GoPro video files do not contain any significant data and have not been posted to figshare.
DOI: 10.6084/m9.figshare.13311470
title: HKIA Jan2005-Sep2020 updated

description: For publication
DOI: 10.6084/m9.figshare.13311470.v1
title: HKIA Jan2005-Sep2020 updated

description: For publication
DOI: 10.6084/m9.figshare.13311506
title: Test File

description: Test for upload and download script
DOI: 10.6084/m9.figshare.13311506.v1
title: Test File

description: Test for upload and download script
DOI: 10.13012/b2idb-9720784_v1
title: Data for: Vertebrate scavenger guild composition and utilization of carrion in an East Asian temperate forest

description: This is the data set from the published manuscript 'Vertebrate scavenger guild composition and utilization of carrion in an East Asian temperate forest' by Inagaki et al.
DOI: 10.21227/cshk-2k27
title: EEG dataset of 7-day Motor Imagery BCI

description: In this dataset, we performed a seven-day motor imagery (MI) based BCI experiment without feedback training on 20 healthy subjects. The MI tasks include left hand, right hand, feet and idle task.
DOI: 10.6084/m9.figshare.13213724
title: GSS and GSH

description: GSS and GSH<br>
DOI: 10.6084/m9.figshare.13213724.v8
title: GSS and GSH

description: GSS and GSH<br>
DOI: 10.6084/m9.figshare.13213724.v7
title: GSS and GSH

description: GSS and GSH<br>
DOI: 10.6084/m9.figshare.13309121.v1
title: Environmental factors affect the evolution of linguistic subgroups in Borneo

description: Electronic supporting material for the paper: <b>Environmental factors affect the evolution of linguistic subgroups in Borneo</b>
DOI: 10.5281/zenodo.4299494
title: Food fraud data based on the European Rapid Alert System for Food and Feed (RASFF)

description: The data contains information on food fraud. A total of 1634 food fraud notifications for the period 2000-2020 were downloaded from the Rapid Alert System for Food and Feed (RASFF) database. Each record contains detailed information on the kind of notification and the products and countries involved. Based on the description in each notification we added a variable "food fraud type" (i.e. six different types of food fraud). This dataset can be used to analyze food fraud, and a subset was used to train a Bayesian network model to predict food fraud type. This research article titled “Prediction of food fraud type using data from Rapid Alert System for Food and Feed (RASFF) and Bayesian network modelling” can be found here: https://doi.org/10.1016/j.foodcont.2015.09.026 <strong>Dataset column names</strong> year - year notification was made product - categorization of the different products notification - categorization of the notifications notified - country that made the notification origin - country where the product originated from fraud - classification of fraud type
DOI: 10.25345/c5149m
title: MassIVE MSV000086539 - The neomycin resistance cassette in the targeted allele of Shank3B knock-out mice has potential off-target effects to produce an unusual Shank3 isoform
title: Variants of the SH3 and multiple ankyrin repeat domains 3 (SHANK3), which encodes postsynaptic scaffolds, are associated with brain disorders. The targeted alleles in a few Shank3 knock-out (KO) lines contain a neomycin resistance (Neo) cassette, which may perturb the normal expression of neighboring genes; however, this has not been investigated in detail. We previously reported an unexpected increase in the mRNA expression of Shank3 exons 1~12 in the brains of Shank3B KO mice generated by replacing Shank3 exons 13~16 with the Neo cassette. In this study, we confirmed that the increased Shank3 mRNA in Shank3B KO brains produced an unusual ~60 kDa Shank3 isoform (Shank3-N), which did not properly localize to the synaptic compartment.
DOI: 10.6084/m9.figshare.13309121
title: Environmental factors affect the evolution of linguistic subgroups in Borneo

description: Electronic supporting material for the paper: <b>Environmental factors affect the evolution of linguistic subgroups in Borneo</b>
DOI: 10.6084/m9.figshare.13309121.v2
title: Environmental factors affect the evolution of linguistic subgroups in Borneo

description: Electronic supporting material for the paper: <b>Environmental factors affect the evolution of linguistic subgroups in Borneo</b>
DOI: 10.25345/c5wf7q
title: MassIVE MSV000086540 - GNPS-the mass spectrum of gancao-sheng
title: This is the mass spectrum data of a plant extract.
DOI: 10.14284/436
title: NZDF Southern Ocean Wave Buoy Data: Deployment 1-3 (2017-2020)

description: Directional wave spectra measured in 150 m water depth south of Campbell Island in the Southern Ocean. Data are available in Native Triaxys format.
description: The New Zealand Defence Force (NZDF) has established a permanent wave observation station near Campbell Island, south of New Zealand (52 45.71 S, 169 02.54E). The site was chosen for logistical convenience and its unique location adjacent to the highly energetic Southern Ocean; allowing instrumentation typically deployed on the continental shelf to be used in this rarely observed southern environment. Validation of the measured significant wave height against co-located satellite altimeter observations suggests that the predominant wave directions a re not attenuated by the island. The data provide a valuable record of the detailed wave spectral characteristics from one of the least-sampled parts of the Global Ocean.
DOI: 10.6084/m9.figshare.2374054
title: Long-term wheel-running and acute 6-h advances alter glucose tolerance and insulin levels in TALLYHO/JngJ mice

description: Studies have shown a relationship between circadian rhythm disruptions and type-2 diabetes. This investigation examined the effects of circadian disruption (6-h phase advances) on the progression of diabetes in a type-2 diabetic mouse model –TALLYHO/JngJ – and whether wheel-running can alleviate the effects of the phase advances. 6-h advances alter fasting glucose, glucose tolerance and insulin production. Wheel-running reduced body mass, improved glucose tolerance and reduced insulin in TALLYHO/JngJ and alleviated some of the changes in diabetic symptoms due to 6-h advances. These results indicate that individuals with type-2 diabetes can benefit from physical activity and exercise can be a countermeasure to offset the effects of an acute phase advance.
DOI: 10.48370/ofd/qmzqzb
title: Nerecznica górska (Dryopteris expansa (C. Presl) Fraser-Jenk. Jermy), 7748

description: Herbarium
DOI: 10.6084/m9.figshare.13311698.v1
title: BECK FOREIGN MED STUDENTS

description: foreign medical students<br>
DOI: 10.6084/m9.figshare.13311698
title: BECK FOREIGN MED STUDENTS

description: foreign medical students<br>
DOI: 10.6084/m9.figshare.13311647
title: Supplementary Material for: Pre-Stroke Glycemic Variability Estimated by Glycated Albumin Is Associated with Early Neurological Deterioration and Poor Functional Outcome in Prediabetic Patients with Acute Ischemic Stroke

description: <b><i>Introduction:</i></b> Whether glycemic variability prior to stroke increases the risk of stroke outcomes in prediabetic patients presenting with acute ischemic stroke is still unclear. We evaluated whether pre-stroke glycemic variability, estimated by glycated albumin (GA), increased early neurological deterioration (END) and functional outcomes in prediabetic patients with acute ischemic stroke. <b><i>Methods:</i></b> A total of 215 acute ischemic stroke patients with prediabetes were evaluated. The primary outcome was END, defined as an incremental increase in the National Institutes of Health Stroke Scale score by ≥1 point in motor power or ≥2 points in the total score within the 7 days after admission. The secondary outcome was poor functional status defined by a modified Rankin Scale at 3 months. Higher GA (≥16.0%) was determined to reflect glycemic fluctuation prior to ischemic stroke. <b><i>Results:</i></b> Of the 215 prediabetic patients, 77 (35.8%) were in the higher GA group. In prediabetic patients, END occurrence and poor functional status were higher in the higher GA group than in the lower GA group. The multivariate analysis showed that a higher GA was associated with an increased risk of END occurrence and poor functional outcomes at 3 months (adjusted odds ratio [95% confidence interval], 4.58 [1.64–12.81], <i>p</i> = 0.004 and 2.50 [1.19–5.25], <i>p</i> = 0.02, respectively). <b><i>Conclusion:</i></b> Pre-stroke glycemic variability estimated by GA was associated with END occurrence and poor functional outcome after ischemic stroke in patients with prediabetes.
DOI: 10.6084/m9.figshare.13311647.v1
title: Supplementary Material for: Pre-Stroke Glycemic Variability Estimated by Glycated Albumin Is Associated with Early Neurological Deterioration and Poor Functional Outcome in Prediabetic Patients with Acute Ischemic Stroke

description: <b><i>Introduction:</i></b> Whether glycemic variability prior to stroke increases the risk of stroke outcomes in prediabetic patients presenting with acute ischemic stroke is still unclear. We evaluated whether pre-stroke glycemic variability, estimated by glycated albumin (GA), increased early neurological deterioration (END) and functional outcomes in prediabetic patients with acute ischemic stroke. <b><i>Methods:</i></b> A total of 215 acute ischemic stroke patients with prediabetes were evaluated. The primary outcome was END, defined as an incremental increase in the National Institutes of Health Stroke Scale score by ≥1 point in motor power or ≥2 points in the total score within the 7 days after admission. The secondary outcome was poor functional status defined by a modified Rankin Scale at 3 months. Higher GA (≥16.0%) was determined to reflect glycemic fluctuation prior to ischemic stroke. <b><i>Results:</i></b> Of the 215 prediabetic patients, 77 (35.8%) were in the higher GA group. In prediabetic patients, END occurrence and poor functional status were higher in the higher GA group than in the lower GA group. The multivariate analysis showed that a higher GA was associated with an increased risk of END occurrence and poor functional outcomes at 3 months (adjusted odds ratio [95% confidence interval], 4.58 [1.64–12.81], <i>p</i> = 0.004 and 2.50 [1.19–5.25], <i>p</i> = 0.02, respectively). <b><i>Conclusion:</i></b> Pre-stroke glycemic variability estimated by GA was associated with END occurrence and poor functional outcome after ischemic stroke in patients with prediabetes.
DOI: 10.5281/zenodo.4146856
title: Analysis of the design alternatives for Deaf patient-doctor discussion on self-management and question and answer (Q&A) session

description: This analysis contributed the findings regarding the design alternatives for Deaf patient-doctor discussion on self-management and question and answer (Q&A) session to Co-evaluation Activity 3. These findings were used to improve Deaf-friendly mobile interfaces.
DOI: 10.5281/zenodo.4146855
title: Analysis of the design alternatives for Deaf patient-doctor discussion on self-management and question and answer (Q&A) session

description: This analysis contributed the findings regarding the design alternatives for Deaf patient-doctor discussion on self-management and question and answer (Q&A) session to Co-evaluation Activity 3. These findings were used to improve Deaf-friendly mobile interfaces.
DOI: 10.5281/zenodo.4146723
title: Analysis of the participant's self-assessments on their understanding of diabetes before and after watching each health educational videos

description: This analysis was conducted on the data retrieved from Deaf participants during Co-evaluation 2. This analysis contributed to the findings about participant’s self-assessments on their understanding of diabetes before and after watching each health education video.
DOI: 10.5281/zenodo.4140363
title: Analysis of Deaf participants' feedback on visual materials and presentations of all elements

description: The analysis combined the analysis of the Deaf participants' feedback on visual materials and presentations of all elements. It contributed findings to Co-evaluation Activity 2.
DOI: 10.5281/zenodo.4139717
title: Data analyses of Co-evaluation Activity 1

description: The data retrieved from Groups 1 and 2 of Co-evaluation Activity 1. Feedback from doctors and nurses who had been engaged in type 2 diabetes treatments were coded into 1) satisfactions, 2) suggestions for changes, 3) preferences, and 4) concerns.
DOI: 10.5281/zenodo.4140365
title: The analysis of the intelligibility of the narrations in SASL for Deaf people

description: This analysis was composed of the intelligibility that the participants perceived from the health educational videos and the percentages that each participant scored per video. This analysis contributed findings to Co-evaluation Activity 2.
DOI: 10.5281/zenodo.4146722
title: Analysis of the participant's self-assessments on their understanding of diabetes before and after watching each health educational videos

description: This analysis was conducted on the data retrieved from Deaf participants during Co-evaluation 2. This analysis contributed to the findings about participant’s self-assessments on their understanding of diabetes before and after watching each health education video.
DOI: 10.5281/zenodo.4140362
title: Analysis of Deaf participants' feedback on visual materials and presentations of all elements

description: The analysis combined the analysis of the Deaf participants' feedback on visual materials and presentations of all elements. It contributed findings to Co-evaluation Activity 2.
DOI: 10.5281/zenodo.4139716
title: Data analyses of Co-evaluation Activity 1

description: The data retrieved from Groups 1 and 2 of Co-evaluation Activity 1. Feedback from doctors and nurses who had been engaged in type 2 diabetes treatments were coded into 1) satisfactions, 2) suggestions for changes, 3) preferences, and 4) concerns.
DOI: 10.5281/zenodo.4140364
title: The analysis of the intelligibility of the narrations in SASL for Deaf people

description: This analysis was composed of the intelligibility that the participants perceived from the health educational videos and the percentages that each participant scored per video. This analysis contributed findings to Co-evaluation Activity 2.
DOI: 10.5281/zenodo.4133610
title: Design requirements of the app for bridging communication between a Deaf patient and healthcare personnel

description: These design requirements were part of the findings from Co-design Activity 1. They were derived based on the ideas drawn by health professionals and Deaf participants, including suggestions regarding mobile-interface design from two renowned design guidelines of Hoober’s and Berkman’s (2011) and McVicar’s (2012).
DOI: 10.5281/zenodo.4133609
title: Design requirements of the app for bridging communication between a Deaf patient and healthcare personnel

description: These design requirements were part of the findings from Co-design Activity 1. They were derived based on the ideas drawn by health professionals and Deaf participants, including suggestions regarding mobile-interface design from two renowned design guidelines of Hoober’s and Berkman’s (2011) and McVicar’s (2012).
DOI: 10.3204/pubdb-2019-05543
title: Fe(II)-3-grid_MLCT21, CCDC No: 1942225 (2019)
DOI: 10.3204/pubdb-2019-05544
title: Fe(II)-3-grid_MLCT22, CCDC No: 1942226 (2019)
DOI: 10.21227/s744-z594
title: Manipulation Volume inside the Knee Joint Capsule

description: This dataset contains segmented data of nine human knees. For each of the knees, the surfaces (vertices and faces) of the following structures are provided: femur, tibia, fibula, patella, and the contrast solution that was injected into the knee joint representing the volume that is available for the manipulation of surgical instruments.This dataset belongs to a manuscript to be published soon.
DOI: 10.5281/zenodo.4296449
title: Neurogenomic divergence during speciation by reinforcement of mating behaviors in chorus frogs (Pseudacris) – De novo reference transcriptome raw data, contigs and gene annotations

description: RNA-Seq raw data used in the assembly and annotation of a reference transcriptome for the Upland Chorus Frog, <em>Pseudacris feriarum</em>. Raw data were obtained by sequencing of four tissue types: Brain, eyes, testis, and somatic. Assembled contigs (Trinity) and gene annotations (Trinotate) are also provided.
DOI: 10.5281/zenodo.4296448
title: Neurogenomic divergence during speciation by reinforcement of mating behaviors in chorus frogs (Pseudacris) – De novo reference transcriptome raw data, contigs and gene annotations

description: RNA-Seq raw data used in the assembly and annotation of a reference transcriptome for the Upland Chorus Frog, <em>Pseudacris feriarum</em>. Raw data were obtained by sequencing of four tissue types: Brain, eyes, testis, and somatic. Assembled contigs (Trinity) and gene annotations (Trinotate) are also provided.
DOI: 10.3204/pubdb-2019-05545
title: Fe(II)-3-grid_MLCT23, CCDC No: 1942227 (2019)
DOI: 10.3204/pubdb-2019-05546
title: Fe(II)-3-grid_MLCT24, CCDC No: 1942228 (2019)
DOI: 10.3204/pubdb-2019-05547
title: Fe(II)-3-grid_MLCT25, CCDC No: 1942229 (2019)
DOI: 10.3204/pubdb-2019-05549
title: Fe(II)-3-grid_MLCT27, CCDC No: 1942231 (2019)
DOI: 10.3204/pubdb-2019-05550
title: Fe(II)-3-grid_MLCT28, CCDC No: 1942232 (2019)
DOI: 10.3204/pubdb-2019-05551
title: Fe(II)-3-grid_MLCT29_1, CCDC No: 1942233 (2019)
DOI: 10.3204/pubdb-2019-05552
title: Fe(II)-3-grid_MLCT29_2, TR1, CCDC No: 1942234 (2019)
DOI: 10.3204/pubdb-2019-05553
title: Fe(II)-3-grid_MLCT30 Fe(II)-3-grid, TR1, CCDC No: 1942235 (2019)
DOI: 10.6084/m9.figshare.13311737
title: Supplementary Material for: Impact of Lung Biopsy on Lung Function in Idiopathic Pulmonary Fibrosis

description: <b><i>Background:</i></b> Video-assisted surgical lung biopsy (SLB) is performed in 10–30% of cases to establish the diagnosis of idiopathic pulmonary fibrosis (IPF). <b><i>Objectives:</i></b> The aim of the study was to analyze the impact of SLB on lung function in patients eventually diagnosed with IPF. <b><i>Methods:</i></b> This is an observational, retrospective, monocentric study of all consecutive patients eventually diagnosed with IPF in multidisciplinary discussion who underwent SLB over 10 years in a specialized center. The primary end point was the variation in forced vital capacity (FVC) before and after the SLB. The secondary end points were the variations in forced expiratory volume in one second (FEV1), total lung capacity (TLC), carbon monoxide diffusion capacity (DLCO), and morbidity and mortality associated with the SLB. <b><i>Results:</i></b> In 118 patients who underwent SLB and were diagnosed with IPF, a relative decrease in FVC of 4.8% (<i>p</i> &lt; 0.001) was found between measurements performed before and after the procedure. The mean FVC decrease was 156 ± 386 mL in an average period of 185 days, representing an annualized decline of 363 ± 764 mL/year. A significant decrease was also observed after SLB in FEV1, TLC, and DLCO. Complications within 30 days of SLB occurred in 14.4% of patients. Two patients (1.7%) died within 30 days, where one of them had poor lung function. Survival at 1 year was significantly poorer in patients with FVC &lt;50% at baseline. <b><i>Conclusion:</i></b> In this uncontrolled study in patients ultimately diagnosed with IPF, SLB was followed by a significant decline in FVC, which appears to be numerically greater than the average decline in the absence of treatment in the literature. <b><i>Summary at a Glance:</i></b> This study evaluated the change in lung function in 118 consecutive patients diagnosed with idiopathic pulmonary fibrosis by surgical lung biopsy. Forced vital capacity decreased by 156 ± 386 mL in a mean of 185 days between the last measurement before and first measurement after biopsy, representing an annualized decline of 363 ± 764 mL/year.