cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/smydkbpgnf
title: Health assessment and size measurement of Atlantic salmon from pictures and videos in a commercial sea cage at 4 depths

description: This repository contains the raw data and R scripts used in the statistical analyses for our publication: "A case study exploring physical health and size stratifications of Atlantic salmon (Salmo salar) with depth in a commercial sea cage." Currently under review. We encourage readers to consult the article when available for detailed information on data collection, variable definitions, analytical methods, and conclusions.

We present the raw health scoring data for our two datasets, the stereovision dataset and the CView Eye (automatic sensor; CView Eye 2023-2024, Createview AS, Molde, Norway) dataset, along with size measurements: fork length (measured using EventMeasure; V6.43–64 bit, SeaGIS Pty Ltd 2006–2024, Bacchus Marsh VIC, Australia) for the stereovision dataset, and weight (automatically measured by the stereovision cameras of the sensor) for the CView Eye dataset. Data were collected at four depths (1 m, 5 m, 9 m, and 14 m) in a commercial sea cage (Gudmundset fish farm in Møre og Romsdal county, Norway) between June and August 2024.

For the health assessments, fish were scored from 0 = no damage to 3 = serious damage, following the Laksvel protocol ("A standardised, operational welfare monitoring protocol for Atlantic salmon held in sea cages", Nilsson et al., 2025) for the selected indicators: spinal deformity (SD), jaw deformity (JD), emaciation (E), operculum damage (O), scale loss (SL), Body wound (BW). In the Stereovision dataset, scoring was performed manually from video footage. In the CView Eye dataset, scoring was performed manually on a random selection of images selected by the sensor.

Dataset Summary
Stereovision dataset:
4,053 fish scored and measured for fork length
→ File: HealthScoring-LengthMsrts-Stereovision.xlsx

CView Eye dataset:
8,641 fish scored (note: not all indicators were possible to score due to bad fish orientation, visibility, or lighting on the pictures)
→ File: HealthScoring_fromsensorpictures.xlsx
57,616 fish retained for weight estimation
→ File: SizeMsrts_automaticsensor.xlsx

Statistical Analyses
Principal Component Analysis (PCA) was used to explore correlations among health indicators
→ Script: PCAscript.R

Generalized Linear Mixed Models were applied to each health indicator as an outcome variable for both datasets
→ Scripts: HealthScores_analysis_Stereovision.R, HealthScores_analysis_CViewdata.R

Linear Mixed-Effects Models were used to analyze size data (length or weight)
→ Scripts: Length_analysis_Stereovision.R, Weight_analysis_CViewdata.R
DOI: 10.17632/smydkbpgnf.2
title: Health assessment and size measurement of Atlantic salmon from pictures and videos in a commercial sea cage at 4 depths

description: This repository contains the raw data and R scripts used in the statistical analyses for our publication: "A case study exploring physical health and size stratifications of Atlantic salmon (Salmo salar) with depth in a commercial sea cage." Currently under review. We encourage readers to consult the article when available for detailed information on data collection, variable definitions, analytical methods, and conclusions.

We present the raw health scoring data for our two datasets, the stereovision dataset and the CView Eye (automatic sensor; CView Eye 2023-2024, Createview AS, Molde, Norway) dataset, along with size measurements: fork length (measured using EventMeasure; V6.43–64 bit, SeaGIS Pty Ltd 2006–2024, Bacchus Marsh VIC, Australia) for the stereovision dataset, and weight (automatically measured by the stereovision cameras of the sensor) for the CView Eye dataset. Data were collected at four depths (1 m, 5 m, 9 m, and 14 m) in a commercial sea cage (Gudmundset fish farm in Møre og Romsdal county, Norway) between June and August 2024.

For the health assessments, fish were scored from 0 = no damage to 3 = serious damage, following the Laksvel protocol ("A standardised, operational welfare monitoring protocol for Atlantic salmon held in sea cages", Nilsson et al., 2025) for the selected indicators: spinal deformity (SD), jaw deformity (JD), emaciation (E), operculum damage (O), scale loss (SL), Body wound (BW). In the Stereovision dataset, scoring was performed manually from video footage. In the CView Eye dataset, scoring was performed manually on a random selection of images selected by the sensor.

Dataset Summary
Stereovision dataset:
4,053 fish scored and measured for fork length
→ File: HealthScoring-LengthMsrts-Stereovision.xlsx

CView Eye dataset:
8,641 fish scored (note: not all indicators were possible to score due to bad fish orientation, visibility, or lighting on the pictures)
→ File: HealthScoring_fromsensorpictures.xlsx
57,616 fish retained for weight estimation
→ File: SizeMsrts_automaticsensor.xlsx

Statistical Analyses
Principal Component Analysis (PCA) was used to explore correlations among health indicators
→ Script: PCAscript.R

Generalized Linear Mixed Models were applied to each health indicator as an outcome variable for both datasets
→ Scripts: HealthScores_analysis_Stereovision.R, HealthScores_analysis_CViewdata.R

Linear Mixed-Effects Models were used to analyze size data (length or weight)
→ Scripts: Length_analysis_Stereovision.R, Weight_analysis_CViewdata.R
DOI: 10.17632/rn7w4gd6gz
title: Pauers et al. - Labeotropheus morphology for Character Displacement Study

description: This file contains the data used to examine morphological and meristic characteristics among several populations of Labeotropheus in Lake Malawi/Nyasa. We used these data to determine whether or not character displacement had occurred between sympatric L. trewavasae and L. fuelleborni. Briefly, we did find that, when they were found in sympatry, L. trewavasae had a different maxillofacial morphology than when it was found allopatric from a deep-bodied Labeotropheus akin to L. fuelleborni.

The individual morphological measurements, taken by MJP with digital calipers, are found in columns J-AM in the uploaded Excel sheet. The abbreviations include:
HL: head length
SL standard length
Pec: pectoral fin
DF: dorsal fin
DFO: origin of the dorsal fin
DFI: insertion of the dorsal fin
AFO: origin of the anal fin
AFI: insertion of the anal fin
VCF: ventral attachment of the caudal fin
DCF: dorsal attachment of the caudal fin
UJL: upper jaw length
LJL: lower jaw length
LJW: lower jaw width
IOW: interorbital width
SnW: snout width
Tab-Tab: width at the opercular tabs
Pec-Pec: width at the pectoral fins
Pel-Pel: width at the pelvic fins
LLS: lateral line scales
ScDL: dorsolateral scale rows
ScPP: Pectoropelvic scale rows
DFS: Dorsal fin spines
DFR: dorsal fin rays
AFS: anal fin spines
AFR: anal fin rays
GR: Gill rakers
MORPH 1: 1st morphological principal component
MORPH 2-5: 2nd-5th SHEARED morphological principal components

Following Pauers (2016, 2017), we used the 2nd sheared principal component as a proxy for body shape.

All specimens used in this study were captured with the cooperation and collaboration of the Malawi Department of Fisheries (Titus B. Phiri, Deputy Director) and the Tanzanian Fisheries Research Institute (Peter N. Gabagambi, Head of Kyels Station, and Asilatu Shechonge).
DOI: 10.17632/rn7w4gd6gz.1
title: Pauers et al. - Labeotropheus morphology for Character Displacement Study

description: This file contains the data used to examine morphological and meristic characteristics among several populations of Labeotropheus in Lake Malawi/Nyasa. We used these data to determine whether or not character displacement had occurred between sympatric L. trewavasae and L. fuelleborni. Briefly, we did find that, when they were found in sympatry, L. trewavasae had a different maxillofacial morphology than when it was found allopatric from a deep-bodied Labeotropheus akin to L. fuelleborni.

The individual morphological measurements, taken by MJP with digital calipers, are found in columns J-AM in the uploaded Excel sheet. The abbreviations include:
HL: head length
SL standard length
Pec: pectoral fin
DF: dorsal fin
DFO: origin of the dorsal fin
DFI: insertion of the dorsal fin
AFO: origin of the anal fin
AFI: insertion of the anal fin
VCF: ventral attachment of the caudal fin
DCF: dorsal attachment of the caudal fin
UJL: upper jaw length
LJL: lower jaw length
LJW: lower jaw width
IOW: interorbital width
SnW: snout width
Tab-Tab: width at the opercular tabs
Pec-Pec: width at the pectoral fins
Pel-Pel: width at the pelvic fins
LLS: lateral line scales
ScDL: dorsolateral scale rows
ScPP: Pectoropelvic scale rows
DFS: Dorsal fin spines
DFR: dorsal fin rays
AFS: anal fin spines
AFR: anal fin rays
GR: Gill rakers
MORPH 1: 1st morphological principal component
MORPH 2-5: 2nd-5th SHEARED morphological principal components

Following Pauers (2016, 2017), we used the 2nd sheared principal component as a proxy for body shape.

All specimens used in this study were captured with the cooperation and collaboration of the Malawi Department of Fisheries (Titus B. Phiri, Deputy Director) and the Tanzanian Fisheries Research Institute (Peter N. Gabagambi, Head of Kyels Station, and Asilatu Shechonge).
DOI: 10.17632/sg8kd3tc69
title: Beans Survey data Leribe and Mohales Hoek
DOI: 10.17632/sg8kd3tc69.1
title: Beans Survey data Leribe and Mohales Hoek
DOI: 10.5281/zenodo.18679112
title: DATA-SPECIFIC INFORMATION & FILES FOR: Foreigners Heritage Granada Dataset

description: Here you can download the following files:



20190901_ForeignersHeritageGranada_Readme_v01.txt (Documentation, Methodological description, Data dictionary and Metadata guide for the dataset 20190901_ForeignersHeritageGranada_Dataset_v01.csv)

20190901_ForeignersHeritageGranada_Dataset_v01.csv (Dataset resulting from a questionnaire conducted on a sample of foreign tourists during their visit to the city of Granada). The document is provided in Comma-Separated Values (.csv) format using UTF-8 encoding to preserve multilingual characters.

20190901_ForeignersHeritageGranada_questionnaire_EN_v01.pdf (Structured questionnaire in English administered on print paper to a representative sample of foreign tourists visiting the city of Granada. The document is provided in PDF/A format to ensure long-term digital preservation and compliance with FAIR standards)

 20190901_ForeignersHeritageGranada_questionnaire_ES_v01.pdf (Structured questionnaire in Spanish administered on print paper to a representative sample of foreign tourists visiting the city of Granada. The document is provided in PDF/A format to ensure long-term digital preservation and compliance with FAIR standards) 


These files are related to the dataset deposited at the following link: https://doi.org/10.5281/zenodo.18487043

If you are interested in downloading the files from this dataset, please request access via the following email address: jvalverde@ual.es
DOI: 10.5281/zenodo.18679111
title: DATA-SPECIFIC INFORMATION & FILES FOR: Foreigners Heritage Granada Dataset

description: Here you can download the following files:



20190901_ForeignersHeritageGranada_Readme_v01.txt (Documentation, Methodological description, Data dictionary and Metadata guide for the dataset 20190901_ForeignersHeritageGranada_Dataset_v01.csv)

20190901_ForeignersHeritageGranada_Dataset_v01.csv (Dataset resulting from a questionnaire conducted on a sample of foreign tourists during their visit to the city of Granada). The document is provided in Comma-Separated Values (.csv) format using UTF-8 encoding to preserve multilingual characters.

20190901_ForeignersHeritageGranada_questionnaire_EN_v01.pdf (Structured questionnaire in English administered on print paper to a representative sample of foreign tourists visiting the city of Granada. The document is provided in PDF/A format to ensure long-term digital preservation and compliance with FAIR standards)

 20190901_ForeignersHeritageGranada_questionnaire_ES_v01.pdf (Structured questionnaire in Spanish administered on print paper to a representative sample of foreign tourists visiting the city of Granada. The document is provided in PDF/A format to ensure long-term digital preservation and compliance with FAIR standards) 


These files are related to the dataset deposited at the following link: https://doi.org/10.5281/zenodo.18487043

If you are interested in downloading the files from this dataset, please request access via the following email address: jvalverde@ual.es
DOI: 10.17632/64h6mr5b3v
title: Effects of seated whole-body vibration on the lumbar spine: A Sprague-Dawley animal model_Vibration Exposure Video

description: Effects of seated whole-body vibration on the lumbar spine: A Sprague-Dawley animal model vibration exposure video
DOI: 10.17632/64h6mr5b3v.1
title: Effects of seated whole-body vibration on the lumbar spine: A Sprague-Dawley animal model_Vibration Exposure Video

description: Effects of seated whole-body vibration on the lumbar spine: A Sprague-Dawley animal model vibration exposure video
DOI: 10.17632/5g87ny6d5c
title: Gender, Colonialism, and Cultural Resistance in The Playboy of the Western World

description: J. M. Synge’s The Playboy of the Western World remains a site of cultural controversy, yet scholarly focus on its nationalist reception has often overlooked its critique of colonial power structures, particularly regarding Irish womanhood. This paper reinterprets the play through postcolonial and feminist lenses, arguing that Synge’s female characters embody a subtle but significant cultural resistance to British imperial homogenization that controlled their lives. Drawing on Matthew Arnold’s critique of mass culture’s demand for social conformity, the paper first examines how colonial education systems sought to Anglicize Irish society. Arif Dirlik’s emphasis on local culture’s political significance then shows how the women’s roles in communal judgment, oral tradition, and public morality function as sites of embedded resistance. However, Gayatri Chakravorty Spivak’s concept of the “subaltern woman” complicates this reading, revealing how their voices remain distorted within both colonial and nationalist narratives. Finally, Edward Said’s theory of cultural imperialism contextualizes Synge’s work as layered commentary on gender and power. Thus, this analysis repositions Synge’s women as important figures in Ireland’s cultural struggle, demonstrating how local practices and feminine agency subvert the homogenizing forces of British ideology while acknowledging the ambivalent limitations of their resistance in the cultural struggle
DOI: 10.17632/5g87ny6d5c.1
title: Gender, Colonialism, and Cultural Resistance in The Playboy of the Western World

description: J. M. Synge’s The Playboy of the Western World remains a site of cultural controversy, yet scholarly focus on its nationalist reception has often overlooked its critique of colonial power structures, particularly regarding Irish womanhood. This paper reinterprets the play through postcolonial and feminist lenses, arguing that Synge’s female characters embody a subtle but significant cultural resistance to British imperial homogenization that controlled their lives. Drawing on Matthew Arnold’s critique of mass culture’s demand for social conformity, the paper first examines how colonial education systems sought to Anglicize Irish society. Arif Dirlik’s emphasis on local culture’s political significance then shows how the women’s roles in communal judgment, oral tradition, and public morality function as sites of embedded resistance. However, Gayatri Chakravorty Spivak’s concept of the “subaltern woman” complicates this reading, revealing how their voices remain distorted within both colonial and nationalist narratives. Finally, Edward Said’s theory of cultural imperialism contextualizes Synge’s work as layered commentary on gender and power. Thus, this analysis repositions Synge’s women as important figures in Ireland’s cultural struggle, demonstrating how local practices and feminine agency subvert the homogenizing forces of British ideology while acknowledging the ambivalent limitations of their resistance in the cultural struggle
DOI: 10.17632/6fwmw6y9ts
title: Post-Ischemia Lipidome Trajectory - Nbiol

description: This dataset provides longitudinal phospholipid-class lipidomics in hippocampus and plasma from a transient middle cerebral artery occlusion (tMCAO) model, paired with time-matched sham controls. Lipid class composition is reported as molar percentage (%mol) and includes PA, PG, PI, PS, PE, PC, ether-linked subclasses (ePS, ePE, ePC), lysophospholipids (LPE, LPC), and sphingomyelin (SM). Samples were collected at 6 h, 24 h, 7 d, 15 d, 1 month, and 4 months post-ischemia to capture acute-to-chronic remodeling of membrane lipid composition across tissues and time.
DOI: 10.17632/6fwmw6y9ts.1
title: Post-Ischemia Lipidome Trajectory - Nbiol

description: This dataset provides longitudinal phospholipid-class lipidomics in hippocampus and plasma from a transient middle cerebral artery occlusion (tMCAO) model, paired with time-matched sham controls. Lipid class composition is reported as molar percentage (%mol) and includes PA, PG, PI, PS, PE, PC, ether-linked subclasses (ePS, ePE, ePC), lysophospholipids (LPE, LPC), and sphingomyelin (SM). Samples were collected at 6 h, 24 h, 7 d, 15 d, 1 month, and 4 months post-ischemia to capture acute-to-chronic remodeling of membrane lipid composition across tissues and time.
DOI: 10.17632/brx9bsxnpx
title: Women’s Soccer Penalty Kick Data Captured by Computer Vision Models

description: The penalty_pose_keypoints.csv dataset contains frame-level 2D pose-tracking data for women’s soccer penalty kicks, extracted from standard video footage using a reproducible YOLOv8 pose pipeline. Each observation corresponds to a single video frame (mean FPS = 25), spanning the run-up from the start of a penalty kick to the final frame at ball contact. The dataset includes both identifier and outcome labels for each kick (e.g., kick id, kick outcome, kick direction, player footedness, and camera direction), as well as tracking metadata for the detected kicker.

For each frame, the file records the smoothed bounding-box coordinates and 12 COCO body joints (shoulders through ankles; indices 5–16) as 2D pixel coordinates. Joint locations are provided in two coordinate systems: (1) absolute pixel positions in the image (origin at the top-left), and (2) box-centered coordinates created by subtracting the axes' center points to support cross-view comparison and normalization. The published dataset contains 11,140 frames from 133 penalties recorded during collegiate women's soccer training sessions and games.
DOI: 10.17632/brx9bsxnpx.2
title: Women’s Soccer Penalty Kick Data Captured by Computer Vision Models

description: The penalty_pose_keypoints.csv dataset contains frame-level 2D pose-tracking data for women’s soccer penalty kicks, extracted from standard video footage using a reproducible YOLOv8 pose pipeline. Each observation corresponds to a single video frame (mean FPS = 25), spanning the run-up from the start of a penalty kick to the final frame at ball contact. The dataset includes both identifier and outcome labels for each kick (e.g., kick id, kick outcome, kick direction, player footedness, and camera direction), as well as tracking metadata for the detected kicker.

For each frame, the file records the smoothed bounding-box coordinates and 12 COCO body joints (shoulders through ankles; indices 5–16) as 2D pixel coordinates. Joint locations are provided in two coordinate systems: (1) absolute pixel positions in the image (origin at the top-left), and (2) box-centered coordinates created by subtracting the axes' center points to support cross-view comparison and normalization. The published dataset contains 11,140 frames from 133 penalties recorded during collegiate women's soccer training sessions and games.
DOI: 10.17632/kchh5cd4xw
title: Turkish Mounted Archery

description: 1.Turkish Mounted Archery Sample Dataset

2.Measurement Model Results

3.Bootstrapping Results
DOI: 10.17632/kchh5cd4xw.1
title: Turkish Mounted Archery

description: 1.Turkish Mounted Archery Sample Dataset

2.Measurement Model Results

3.Bootstrapping Results
DOI: 10.5281/zenodo.18679208
title: Environmental drivers of European plant distributions

description: This repository contains the data and code associated with the manuscript Environmental drivers of plant species distributions across Europe.

The study models the distribution of 11,535 plant species across Europe using XGBoost species distribution models (SDMs) and quantifies the relative importance of 36 environmental predictors using SHAP (SHapley Additive exPlanations) values at continental and bioregional scales.

The repository includes:– Processed datasets used for statistical analyses– SHAP summaries  – R and Python scripts for statistical analyses and figure reproduction

Anonymous authorship during peer-review.
DOI: 10.17632/zw2w5hw27w
title: JAK inhibition therapy for intractable cutaneous infectious granulomatosis with unknown etiology: a case report

description: Figure 1 (a and b) Clinical images of two plaques with ulceration and thick scabs were present on the left face (a) and left leg (b). (c and d) Histological pictures from the face (c) and leg (d) showing irregular hyperplasia of the epidermis, infiltration of lymphocytes, plasma cells, histiocytes, and neutrophils in the dermis, along with the presence of multinucleated giant cells, which supported a diagnosis of infectious granuloma. (H&E, 100×). (e and f) Significant resolution of the rash in the face (e) and leg (f) after 5 months of therapy with upadacitinib.
DOI: 10.17632/zw2w5hw27w.1
title: JAK inhibition therapy for intractable cutaneous infectious granulomatosis with unknown etiology: a case report

description: Figure 1 (a and b) Clinical images of two plaques with ulceration and thick scabs were present on the left face (a) and left leg (b). (c and d) Histological pictures from the face (c) and leg (d) showing irregular hyperplasia of the epidermis, infiltration of lymphocytes, plasma cells, histiocytes, and neutrophils in the dermis, along with the presence of multinucleated giant cells, which supported a diagnosis of infectious granuloma. (H&E, 100×). (e and f) Significant resolution of the rash in the face (e) and leg (f) after 5 months of therapy with upadacitinib.
DOI: 10.17632/bkgpx2765s
title: Africa Entrepreneurial Ecosystem Index - World Development

description: The Africa Entrepreneurial Ecosystem Index dataset contains data on the conditions for productive entrepreneurship in African countries. Together, these conditions form an entrepreneurial ecosystem. The dataset contains 21 indicators that provide information on the quality of the seven dimensions of national entrepreneurial ecosystems in Africa.
DOI: 10.17632/bkgpx2765s.1
title: Africa Entrepreneurial Ecosystem Index - World Development

description: The Africa Entrepreneurial Ecosystem Index dataset contains data on the conditions for productive entrepreneurship in African countries. Together, these conditions form an entrepreneurial ecosystem. The dataset contains 21 indicators that provide information on the quality of the seven dimensions of national entrepreneurial ecosystems in Africa.
DOI: 10.5281/zenodo.16903179
title: Auxiliary data for Fahrenbach et al. 2025 - "Reforestation scenarios shape global and regional temperature outcomes"

description: Relevant output variables from CESM2 simulations with the Bastin, Moustakis and Hurtt reforestation potentials as well as code for creating the figures presented in Fahrenbach et al. 2025 - "Reforestation scenarios shape global and regional temperature outcomes" (Communications Earth and Environment)

Please read the README.txt file for additional information on the uploaded variables.

Please contact the corresponding author, Nora Fahrenbach, for questions or further data queries: nora.fahrenbach@env.ethz.ch

Please acknowledge any code or data used by citing this Zenodo repository and the corresponding publication.