cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8057981.v1
title: Additional file 3: of Software tool for internal standard based normalization of lipids, and effect of data-processing strategies on resulting values

description: LipidMatch Normalizer Software. The LMN_Software.zip file contains batch files for lipidomics with MZmine processing and the LipidMatch Normalizer R script. The .zip file also contains files to guide the user in using LipidMatch, which include: A manual and troubleshooting document, and example input and output data (the data used in this paper). For the most up to date version of LipidMatch Normalizer please visit: http://secim.ufl.edu/secim-tools/ . (ZIP 126 kb)
DOI: 10.6084/m9.figshare.9917840.v1
title: Land use types.zip

description: Espírito Santo State land use types in shapefile format, updated from Geobases/Aracruz Celulose AS (1999) through overlay with 15-m spatial resolution Landsat5 satellite imagery from 2005/2006.
DOI: 10.6084/m9.figshare.11728980.v18
title: Aqualitas Database (full release)

description: <b>Aqualitas</b> database (full release) corresponding to 100 diatom taxa with about 100 specimens/taxon. The images have been taken with a 60X, NA=0.85 objective using oblique illumination. If you use this database please cite the following publications:<br>[1] Bueno, G. et al, “Automated Diatom Classification (Part A): Handcrafted feature approaches", Applied Sciences, 7, 753, pp. 1-22 (2017) doi: 10.3390/app7080753[2] Pedraza, A. et al, “Automated Diatom Classification (Part B): A Deep Learning Approach" Applied Sciences, 7, 460, pp. 1-25 (2017) doi: 10.3390/app7050460<br> <br>NOTE: For calibrating the images, use the attached image ruler. The distance between the large ticks is 100um.<br><b>Acknowledgements</b>This work was supported by the Spanish Government under the <b>Aqualitas</b> project (CTM2014-51907) during the period 2015-2019.
DOI: 10.6084/m9.figshare.1522383.v1
title: Xq H3K27me3

description: Green is RNA FISH using a probe against XIST RNA. Red is an anti-H3K27me3 antibody. Blue is DAPI. These images were used to calculate data shown in Table 2.
DOI: 10.6084/m9.figshare.19518799.v1
title: Prostate

description: The folder contains: Metabolites-based_tissue and Metabolites_, Enzymes-, Reactions-based_PDGSMMs networks of prostate cancer in graphml format; sample_sheet.tsv tabular file containing GDC samples metadata, namely clinical information of samples; dictionary_id excel file for correspondence between Biomodel (PDSGSMM) id and TCGA id.
DOI: 10.6084/m9.figshare.25052648.v1
title: ref_Reference_Mapping_20220525

description: This is the pre-annotated reference file for CD4T classifications, as used in the "ref" parameter of the "reference_mapping_seuratobj" function (https://github.com/yyoshiaki/screfmapping?tab=readme-ov-file).
DOI: 10.6084/m9.figshare.28287506.v1
title: Volatile samples: raw data and metadata

description: Agilent MassHunter raw data files (as a zip archive), with metadata as an Excel spreadsheet.
DOI: 10.6084/m9.figshare.28789946.v2
title: Dissertation Data - Raw Data and Tests

description: A collection of data used within a dissertation submitted to the London School of Economics.<br><br>The data concerns the occurrences of three disarmament-related words across approximately four years in seven news publications
DOI: 10.6084/m9.figshare.28838252.v1
title: SRR3414637.uniq.sorted.bam.baihisat

description: https://figshare.com/articles/dataset/SRR3414637_uniq_sorted_bamhisat/28838249
DOI: 10.6084/m9.figshare.29085623.v1
title: Antisense oligonucleotide sequences used in Chung et al.

description: This dataset contains antisense oligonucleotide (ASO) sequences designed to target essential cell wall synthesis genes in *Candida albicans*, including FKS1, FKS2, and CHS3. These ASOs were utilized in the study "Effective Treatment of Systemic Candidiasis by Synergistic Targeting of Cell Wall Synthesis" to inhibit the expression of key fungal enzymes involved in β-glucan and chitin biosynthesis. The sequences are provided in FASTA format. All ASOs were experimentally validated for target specificity and efficacy in vitro and in vivo. This dataset supports the reproducibility and extension of the findings presented in the associated publication.
DOI: 10.17632/wncgkvgv55
title: Southeast Asia container port data set

description: The data was collected from 18 major container ports in Southeast Asia.
- Container throughput was collected from 2017 to 2022
- The information about berth length, number of cranes, total area, and depth was collected for 2017 and 2022
DOI: 10.6084/m9.figshare.11959221.v1
title: Film Industry Network Data

description: These network data tables describe nodes and edges in three film industries (Australia, Germany, Sweden). Data was obtained from different sources. Australian data was derived from the annual awards of the Australian Film Institute. German film industry data was supplied by Elizabeth Prommer at the University of Rostock. Swedish film industry data was supplied by the Swedish Film Institute. Date ranges and attributes were aligned as closely as possible: Australia (2006-15), Sweden (2006-16), Germany (2006-16).<br><br>
DOI: 10.6084/m9.figshare.1289721.v1
title: Effect of capsaicin on vascular smooth muscle cell proliferation: raw data

description: Cell proliferation was estimated by quantification of metabolic activity (Data_1A) and DNA synthesis (Data_1B) (both relative units). Cell death was estimated by quantification of the percentage of extracellular lactate dehydrogenase activity (Data_1C). Numbers in column headers denote capsaicin concentration (uM); Digitonin concentration was 100 ug/mL). Data correspond to Figure 1 in the associated article.
DOI: 10.6084/m9.figshare.16638499.v1
title: Raw tree files

description: Raw tree files used for phylogenetic analysis
DOI: 10.6084/m9.figshare.21791306.v2
title: Home-field advantage affects the local adaptive interaction between Andropogon gerardii ecotypes and rhizobiome

description: Due to climate change, drought frequencies and severities are predicted to increase across the United States. Plant responses and adaptation to environmental stress depend on plant genetic and environmental factors. Understanding the effect of those factors on plant performance is required to predict the response of species to the environmental change. We used reciprocal gardens planted with dry, mesic and wet regional ecotypes of <em>Andropogon gerardii</em> to characterize the rhizosphere communities using 16S rRNA metabarcode sequencing. Even though the local microbial pool was the main driver of the rhizosphere microbial communities, the significant ecotypic effect highlighted the active plant recruitment driven by genetic variations. We also found that ecotypes do better in the recruitment of microbes when planted at homesite, supporting the “home field advantage” hypothesis. At homesites, ecotypes were more successful at recruiting rhizosphere community members unique to the locations - microbial specialists that potentially linked the plant stress response functions. In addition, we found the support for ecotypic variations in recruitment of bacterial stains from the same genera, highlighting the effect of the plant on the rhizosphere microbiome recruitment. The results of this study should facilitate expanded studies on understanding the complexity of relationships between plant host interactions with local soil microbes and identification of functional potential of recruited microbes. Our study has the potential for further predicting ecosystem responses to climate change and the impact of management on restoration practices.
DOI: 10.6084/m9.figshare.22141448.v1
title: npj Clim - Figshare.xlsx

description: Dataset with GHG estimations for wild and domestic herbivores in the Serengeti and Loliondo area. Five different estimations approaches are applied.
DOI: 10.17632/24dknnsn6x
title: Dataset of Nexus Managerial Resilience: A Case of IR 4.0 Companies in Malaysia

description: This dataset consists of the managerial resilience information of Malaysia's nexus working in IR 4.0 related companies.
DOI: 10.6084/m9.figshare.12496520.v1
title: Underlying Data: A Quantitative Analysis of 3D Printed Face Shields and Masks During COVID-19

description: This is the underlying data supporting a study titled "A Quantitative Analysis of 3D Printed Face Shields and Masks During COVID-19" (https://doi.org/10.35241/emeraldopenres.13815.1).<br>37 face shields and 31 face masks suitable for fused filament fabrication (FFF) were analysed from a fabrication perspective, documenting factors such as filament use, time to print and geometric qualities. <br>
DOI: 10.6084/m9.figshare.16935061.v1
title: migration data; Spatiotemporal patterns

description: The population flow data were obtained from the Baidu platform (http://qianxi.baidu.com/).
DOI: 10.6084/m9.figshare.24270595.v1
title: An on-demand bioresorbable neurostimulator

description: Data collection: Electrical characterization data were collected using Tektronix oscilloscope (Tektronix, DPO3052) data saving software. Micro-CT images were taken using Skyscan 1276 (Bruker). Data analysis: Electrical characterization data were analyzed using OriginPro 9.0 and Microsoft Excel (Version 16.71, 23031200). Material characterization data were analyzed using OriginPro 9.0 and Microsoft Excel (Version16.71, 23031200). FEM simulations performed in this work were carried out using COMSOL Multiphysics (Version 5.5). All the statistical analysis were conducted using Prism 9 software (Version 9.5.0, GraphPad). The following softwares were used to conduct micro-CT image processing: NRecon (Bruker) for the reconstruction process, CTAn software (Bruker) for the analysis of reconstructed images, and CTVox software (Bruker) for the 3D-rendering process. The axon length of the nervous tissue was measured using ZEISS ZEN (blue edition) to perform histopathological studies.
DOI: 10.17632/fdzjhb26wz
title: Climatic and landscape evolution of the Azores over the past million years: 2020-2023 geochemical and geochronological data

description: Full data set associated with the thesis project "Climatic and landscape evolution of the Azores over the past million years" by Francisco Hevia-Cruz, under the direction of Anthony Hildenbrand and Nathan D. Sheldon, at Université Paris-Saclay. It corresponds to a single file with six sheets, including the following information: paleosol descriptions, paleosols' major and trace elements geochemistry, paleosols' carbon and nitrogen content, paleosols' delta13C, K-Ar geochronology and 40Ar/39Ar geochronology. As indicated in the file, part of this data was submitted to the Jornal "Quaternary Science Reviews".
DOI: 10.17632/nbxzxn3ffk
title: Oil leak dataset

description: This dataset is a collection of 3D rendering generated images modelling the junction between the high speed shaft and the external bracket of the power generator inside a wind turbine, in presence and absence of oil leaks. This dataset has been developed by the Department of Information Engineering, Università Politecnica delle Marche, Ancona, Italy and the STMicroelectronics, Italy.
DOI: 10.17632/zdfp7y4p45
title: Granite weathering and rare earth mineralization: Insights from stable neodymium isotope in tropical saprolites

description: This dataset includes detailed mineralogical compositions (Table S1), elemental and Nd isotopic compositions of bulk saprolites and sequentially extracted material (Table S2 and S3), types of constituent minerals and their Nd concentrations (Table S4), and Nd fluxes (Table S5) of the Fogang granite weathering profile.
DOI: 10.6084/m9.figshare.13082495.v1
title: CerebellarTMSEEGData.zip

description: Cortical EEG response of ten healthy adults to concurrent cerebellar non-invasive stimulation (single-pulse TMS) using double-cone (DC) and figure-of-eight (F8) Magstim coils. An occipital/parietal control site and electrical control condition is also included. Raw data is contained in folder 'Raw', and cleaned data is contained in folder 'Cleaned'. Please see Readme documents in respective folders for more information on methods of collection, cleaning pipelines and references. <br>
DOI: 10.6084/m9.figshare.5811165.v1
title: Stelzer et al., (2017) Data Analysis.pdf

description: Statistical Analysis from the article "<i>Is it Fish Embryo Test (FET) according to OECD 236 sensible enough for delivering quality data for effluent risk assessment?</i>"<br>
DOI: 10.17632/wkbhmgmhz5
title: Férová - Chitosan concentration NMR relaxometry data

description: This study presents a novel approach for determining chitosan concentration using T2 relaxation times measured by NMR relaxometry. Chitosan is widely applied in nanomaterials and biotechnology, and accurate quantification of its concentration is essential for various applications. Conventional methods, such as colorimetric and spectrophotometric techniques, often require additional chemicals, complex sample preparation, and are limited to certain concentration ranges. In contrast, our method, is straightforward, rapid, and avoids the need for additional reagents or specific temperature conditions. The concentration of chitosan is determined indirectly by the chitosan-water interface. This biointerface affects the relaxation times of the water molecules that are measured. Samples of chitosan in deionized water were analysed over a concentration range of 5–1000 mg/L using the Bruker minispec mq20 at 40°C and 21°C. T2 relaxation times were obtained using the CPMG sequence, and the data were analysed through monoexponential fitting from Bruker software, CONTIN software, and the Solver algorithm. The results demonstrated that our method produces reliable calibration curves, with the CONTIN software providing a continuous distribution of relaxation times that enables precise quantification. By applying linear regression of Absolute Area (AA) from continuous T2 distribution versus concentration, we achieved highly accurate results, making this method a strong competitor to traditional chitosan quantification techniques.
DOI: 10.6084/m9.figshare.16959148.v1
title: Lightly processed ABIDE II statistics

description: This is a lightly processed version of data from the ABIDE2 study.
DOI: 10.6084/m9.figshare.26218037.v1
title: Radiation Belt Electron Acceleration Inside the Plasmasphere

description: This is the dataset used to produce figures for the paper under review with the title of "Radiation Belt Electron Acceleration Inside the Plasmasphere".
DOI: 10.6084/m9.figshare.27940908.v1
title: <b>Data set for </b><b>Skeletal muscle shape influences joint torque exertion</b><b> through the mechanical advantages</b>

description: "dataset.csv" file contains participant characteristics and demographics, knee extension torque, muscle volume of the quadriceps femoris, the first to third shape components (i.e., component scores) of the quadriceps femoris, muscle moment arm, and line-of-action.
DOI: 10.6084/m9.figshare.9896261.v1
title: HLGb1_1.fq.gz

description: The sequence of bacteria in 10-20 cm grassland soil in Hulunbuir Sandy Land
DOI: 10.6084/m9.figshare.10311290.v1
title: Supplementary Material for: Anwendung von Porphyrinen in der antibakteriellen photodynamischen Therapie

description: ntibiotika sind gängige Mittel zur Beherrschung, Behandlung und Vorbeugung von bakteriellen Infektionen, doch bakterielle Resistenzen gegen herkömmliche Antibiotika aller bekannten Klassen haben in den letzten Jahren besonders in Krankenhäusern stark zugenommen und manche Therapien sind wirkungslos geworden. Um diese umsichgreifende Bedrohung der öffentlichen Gesundheit einzudämmen, müssen nicht-invasive, nicht-toxische neue antimikrobielle Strategien gefunden werden, die besser und schneller wirken als die üblichen Antibiotika. Eine solche wirksame Strategie ist die antibakterielle photodynamische Therapie (aPDT). Die vorliegende Übersichtsarbeit befasst sich schwerpunktmäßig mit der Anwendung von Porphyrinen zur photodynamischen Inaktivierung von Bakterien. Mechanismen der bakteriellen Resistenz und aktuelle «grünere» Ansätze für die Synthese von meso-Phenylporphyrinen werden vorgestellt. Auch auf die Bedeutung und die Beschränkungen der aPDT wird eingegangen. Schließlich stellen wir die aktuellen klinischen Anwendungsgebiete sowie die künftigen Perspektiven und Aussichten dieser Antibiotika-freien Behandlungsstrategie im Kampf gegen Infektionskrankheiten vor.
DOI: 10.6084/m9.figshare.18520832.v1
title: Data of piezoelectric sensors

description: Data of piezoelectric sensors
DOI: 10.6084/m9.figshare.25284895.v1
title: Dataset_of_the_modified_disgust_induction_experiment

description: This data was from the modified disgust induction experiment and was used to test the generalization of the subjective disgust experience signature, details see Gan et al. 2023 BioRxiv.
DOI: 10.6084/m9.figshare.5123221.v1
title: Supplementary Material for: Gamma Knife Radiosurgery in the Treatment of Tumor-Related Facial Pain

description: <i>Background:</i> Intracranial neoplasms can cause pain similar to trigeminal neuralgia. Literature regarding radiosurgery for this is limited. We present a retrospective review of patients with tumor-related facial pain from benign lesions treated with gamma knife radiosurgery (GKRS) at Wake Forest University. <i>Objectives: </i>The primary objectives were to determine long-term pain relief and predictive factors for pain alleviation. <i>Methods:</i> We reviewed 515 patients treated with GKRS for benign meningioma, vestibular schwannoma or trigeminal schwannoma between August 1999 and August 2010. Twenty-one eligible patients had tumor-related facial pain prior to GKRS. The median marginal tumor dose was 12 Gy. Long-term pain relief data were obtained by chart review and telephone interview. <i>Results:</i> The median follow-up for symptom evaluation was 3.8 years. Seventeen of 21 patients (81%) experienced a Barrow Neurological Institute (BNI) score of I–III at 6 months following GKRS. Kaplan-Meier estimates of freedom from BNI IV–V relapse were 66% at 1 year and 53% at 2 years. No pain relapses occurred after 2 years. <i>Conclusion:</i> GKRS of benign lesions is a noninvasive option for patients with tumor-related facial pain. Pain relief is modest, with the majority of pain relapses occurring within 2 years and approximately one half of patients maintaining relief beyond 2 years.
DOI: 10.17632/d5mtnm8txb
title: Pure Shift NMR Reference Library for Quantification

description: A reference library of 45 metabolites: folder 1 contains the 1H standard spectra and folder 2 contains the pure shift spectra.
DOI: 10.17632/zjtd63zhz6
title: Grantha Dataset

description: Grantha Palm Leaf Dataset Consistute of Grantha characters extracted from palm leaf images. Grantha characters are characters used in the southern part of India to write the Sanskrit language. Sanskrit has been the official language in Ancient India. Many valuable cultural and literary works of ancient India exist in the form of palm-leaf documents. These palm leaf images are collected from the Oriental Research Institute under the University of Kerala. Grantha dataset constitutes of 3900 character images of 39 classes of Grantha characters. These characters are manually extracted into 39 classes. These folders can be used for testing the efficiency of character recognition algorithms.
DOI: 10.6084/m9.figshare.15090180.v1
title: Metabarcoding-inferred haplotyping

description: The raw sequence data were deposited into the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRR14631855). The Sanger (GenBank accession numbers also listed in Table 1) and ZOTU sequences, sample metadata, and the scripts for the bioinformatics and statistical analyses performed in this study are available from the Figshare Data Repository.
DOI: 10.6084/m9.figshare.19785988.v1
title: 10X_genomics_data

description: This is a set of 10X genomics spatial omix dataset with preprocessed into h5ad files.
DOI: 10.6084/m9.figshare.28834916.v1
title: Supplemental Table 1: Elevated Liver Enzymes in Turner Syndrome: The Role of Low-Grade Inflammation and Hormonal Imbalances.

description: Elevated Liver Enzymes in Turner Syndrome: The Role of Low-Grade Inflammation and Hormonal Imbalances.
DOI: 10.6084/m9.figshare.5126155.v1
title: Supplementary Material for: Dermal Xenobiotic Metabolism: A Comparison between Native Human Skin, Four in vitro Skin Test Systems and a Liver System

description: The xenobiotic metabolism of 4 in vitro human skin test systems (2D and 3D) was compared with that of the native human skin samples from which the skin test systems had been produced. In total 3 skin samples were investigated, each from a different donor to exclude variability due to gender, donor or tissue supplier. In addition, the skin cultures were compared with a surrogate of the liver. Basal and induced phase I and phase II enzymes were analyzed regarding gene/protein expression as well as enzyme activity. The distinctions between the different test systems and the two dermal compartments (epidermis and dermis) were more noticeable than any donor variability. The 3D models of skin and liver mirrored the in vivo situation more realistically than did the monolayer cultures. Phase I metabolism was more pronounced in the hepatic model, whereas phase II metabolism was more prominent in the reconstructed skin. These results show that reconstructed skin models are a valuable tool for organ-specific safety assessment with regard to xenobiotic metabolism.
DOI: 10.6084/m9.figshare.6193103.v1
title: A dataset of camera and sonar images

description: A dataset of camera and sonar images of fishes in an aquarium.
DOI: 10.15468/dl.kds65a
title: Occurrence Download

description: A dataset containing 14183 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Poa angustifolia L.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 14183 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013215-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t7zr6d
title: Occurrence Download

description: A dataset containing 2344799025 species occurrences available in GBIF matching the query:
{
 "Year" : [
 "2015-2026"
 ]
}

 The dataset includes 2344799025 records from 48777 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004753-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yn6gnb
title: Occurrence Download

description: A dataset containing 354 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chrysina resplendens"
 ]
}

 The dataset includes 354 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049833-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7zrt8h
title: Occurrence Download

description: A dataset containing 419 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Impatiens balsamina",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 419 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049834-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.