cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3547149
title: Appendix A. A list of all families, species, and functional groups sampled.

description: A list of all families, species, and functional groups sampled.
DOI: 10.6084/m9.figshare.3547149.v1
title: Appendix A. A list of all families, species, and functional groups sampled.

description: A list of all families, species, and functional groups sampled.
DOI: 10.6084/m9.figshare.3547146
title: Appendix B. Figures showing mean values of height vs. light for various height classes, modeled with log-linear regressions, LMA vs. sample height and light environment for a subset of six species, and plots showing residuals of the height-only model plotted against ln(light) and of the light-only models plotted against height for all functional groups pooled.

description: Figures showing mean values of height vs. light for various height classes, modeled with log-linear regressions, LMA vs. sample height and light environment for a subset of six species, and plots showing residuals of the height-only model plotted against ln(light) and of the light-only models plotted against height for all functional groups pooled.
DOI: 10.6084/m9.figshare.3547146.v1
title: Appendix B. Figures showing mean values of height vs. light for various height classes, modeled with log-linear regressions, LMA vs. sample height and light environment for a subset of six species, and plots showing residuals of the height-only model plotted against ln(light) and of the light-only models plotted against height for all functional groups pooled.

description: Figures showing mean values of height vs. light for various height classes, modeled with log-linear regressions, LMA vs. sample height and light environment for a subset of six species, and plots showing residuals of the height-only model plotted against ln(light) and of the light-only models plotted against height for all functional groups pooled.
DOI: 10.6084/m9.figshare.3547143
title: Appendix A. Tree responses to elevated N input in the lowland and montane forests.

description: Tree responses to elevated N input in the lowland and montane forests.
DOI: 10.6084/m9.figshare.3547143.v1
title: Appendix A. Tree responses to elevated N input in the lowland and montane forests.

description: Tree responses to elevated N input in the lowland and montane forests.
DOI: 10.6084/m9.figshare.3547140
title: Appendix B. Comparison between imidazole buffer (Colman et al. 2007) and our standard method of NH4Cl buffer (without ethylenediamine tetraacetic acid, EDTA) for NO3- determination from our soils extracted with 0.5 mol/L K2SO4.

description: Comparison between imidazole buffer (Colman et al. 2007) and our standard method of NH4Cl buffer (without ethylenediamine tetraacetic acid, EDTA) for NO3- determination from our soils extracted with 0.5 mol/L K2SO4.
DOI: 10.6084/m9.figshare.3547140.v1
title: Appendix B. Comparison between imidazole buffer (Colman et al. 2007) and our standard method of NH4Cl buffer (without ethylenediamine tetraacetic acid, EDTA) for NO3- determination from our soils extracted with 0.5 mol/L K2SO4.

description: Comparison between imidazole buffer (Colman et al. 2007) and our standard method of NH4Cl buffer (without ethylenediamine tetraacetic acid, EDTA) for NO3- determination from our soils extracted with 0.5 mol/L K2SO4.
DOI: 10.6084/m9.figshare.3547137
title: Appendix C. Comparison between imidazole buffer (Colman et al. 2007) and our standard method of NH4Cl buffer (without ethylenediamine tetraacetic acid, EDTA) for NO3- determination from standard (0.5 mol/L K2SO4) solutions containing 4.9 mg NO3--N/L with increasing Fe2+ levels.

description: Comparison between imidazole buffer (Colman et al. 2007) and our standard method of NH4Cl buffer (without ethylenediamine tetraacetic acid, EDTA) for NO3- determination from standard (0.5 mol/L K2SO4) solutions containing 4.9 mg NO3--N/L with increasing Fe2+ levels.
DOI: 10.6084/m9.figshare.3547137.v1
title: Appendix C. Comparison between imidazole buffer (Colman et al. 2007) and our standard method of NH4Cl buffer (without ethylenediamine tetraacetic acid, EDTA) for NO3- determination from standard (0.5 mol/L K2SO4) solutions containing 4.9 mg NO3--N/L with increasing Fe2+ levels.

description: Comparison between imidazole buffer (Colman et al. 2007) and our standard method of NH4Cl buffer (without ethylenediamine tetraacetic acid, EDTA) for NO3- determination from standard (0.5 mol/L K2SO4) solutions containing 4.9 mg NO3--N/L with increasing Fe2+ levels.
DOI: 10.6084/m9.figshare.3547134
title: Appendix A. A description of the zero growth isoclines for the model system (Fig. 5) as well as the maximum levels of root competition grasses and trees can tolerate (Fig. 4).

description: A description of the zero growth isoclines for the model system (Fig. 5) as well as the maximum levels of root competition grasses and trees can tolerate (Fig. 4).
DOI: 10.6084/m9.figshare.3547134.v1
title: Appendix A. A description of the zero growth isoclines for the model system (Fig. 5) as well as the maximum levels of root competition grasses and trees can tolerate (Fig. 4).

description: A description of the zero growth isoclines for the model system (Fig. 5) as well as the maximum levels of root competition grasses and trees can tolerate (Fig. 4).
DOI: 10.6084/m9.figshare.3547131
title: Appendix A. A table showing assignment of all plant species growing in the 14 grassland sites to plant functional groups.

description: A table showing assignment of all plant species growing in the 14 grassland sites to plant functional groups.
DOI: 10.6084/m9.figshare.3547128
title: Appendix A. Whole-plant δ15N and δ13C values for the 38 most abundant species of C3 and C4 plants at the Sevilleta Long Term Ecological Research site.

description: Whole-plant δ15N and δ13C values for the 38 most abundant species of C3 and C4 plants at the Sevilleta Long Term Ecological Research site.
DOI: 10.6084/m9.figshare.3547128.v1
title: Appendix A. Whole-plant δ15N and δ13C values for the 38 most abundant species of C3 and C4 plants at the Sevilleta Long Term Ecological Research site.

description: Whole-plant δ15N and δ13C values for the 38 most abundant species of C3 and C4 plants at the Sevilleta Long Term Ecological Research site.
DOI: 10.6084/m9.figshare.3547125
title: Appendix B. ANOVA results for the effects of season and annual primary production patterns on resource assimilation (δ13C) in lizards and arthropods.

description: ANOVA results for the effects of season and annual primary production patterns on resource assimilation (δ13C) in lizards and arthropods.
DOI: 10.6084/m9.figshare.3547125.v1
title: Appendix B. ANOVA results for the effects of season and annual primary production patterns on resource assimilation (δ13C) in lizards and arthropods.

description: ANOVA results for the effects of season and annual primary production patterns on resource assimilation (δ13C) in lizards and arthropods.
DOI: 10.6084/m9.figshare.3547122
title: Appendix A. The individual-based model for two-species competition based upon a spatial extension to the Lotka-Volterra competition equations.

description: The individual-based model for two-species competition based upon a spatial extension to the Lotka-Volterra competition equations.
DOI: 10.6084/m9.figshare.3547122.v1
title: Appendix A. The individual-based model for two-species competition based upon a spatial extension to the Lotka-Volterra competition equations.

description: The individual-based model for two-species competition based upon a spatial extension to the Lotka-Volterra competition equations.
DOI: 10.6084/m9.figshare.3547119
title: Appendix B. The dynamics for the second moments (pair densities) and method of moment closure used in the mathematical approximation to a spatial extension to the Lotka-Volterra competition equations.

description: The dynamics for the second moments (pair densities) and method of moment closure used in the mathematical approximation to a spatial extension to the Lotka-Volterra competition equations.
DOI: 10.6084/m9.figshare.3547119.v1
title: Appendix B. The dynamics for the second moments (pair densities) and method of moment closure used in the mathematical approximation to a spatial extension to the Lotka-Volterra competition equations.

description: The dynamics for the second moments (pair densities) and method of moment closure used in the mathematical approximation to a spatial extension to the Lotka-Volterra competition equations.
DOI: 10.6084/m9.figshare.3547116
title: Appendix A. Parameter values used to generate expected value data sets.

description: Parameter values used to generate expected value data sets.
DOI: 10.6084/m9.figshare.3547116.v1
title: Appendix A. Parameter values used to generate expected value data sets.

description: Parameter values used to generate expected value data sets.
DOI: 10.6084/m9.figshare.3547113
title: Appendix B. List of constraints used in analysis models.

description: List of constraints used in analysis models.
DOI: 10.6084/m9.figshare.3547113.v1
title: Appendix B. List of constraints used in analysis models.

description: List of constraints used in analysis models.
DOI: 10.6084/m9.figshare.3547110
title: Appendix C. Detailed results for models fit to generated data sets.

description: Detailed results for models fit to generated data sets.
DOI: 10.6084/m9.figshare.3547110.v1
title: Appendix C. Detailed results for models fit to generated data sets.

description: Detailed results for models fit to generated data sets.
DOI: 10.6084/m9.figshare.3547107
title: Appendix A. Minimum and maximum (mean) counts per sampling station of the benthic species.

description: Minimum and maximum (mean) counts per sampling station of the benthic species.
DOI: 10.6084/m9.figshare.3547107.v1
title: Appendix A. Minimum and maximum (mean) counts per sampling station of the benthic species.

description: Minimum and maximum (mean) counts per sampling station of the benthic species.
DOI: 10.6084/m9.figshare.3547104
title: Appendix B. Scatterplot of median grain size (MGS) and inundation time (IT).

description: Scatterplot of median grain size (MGS) and inundation time (IT).
DOI: 10.6084/m9.figshare.3547104.v1
title: Appendix B. Scatterplot of median grain size (MGS) and inundation time (IT).

description: Scatterplot of median grain size (MGS) and inundation time (IT).
DOI: 10.6084/m9.figshare.3547101
title: Appendix C. Comparison between regression coefficients and robust standard errors of a quasi-Poisson generalized linear model (GLM) and a generalized estimating equation (GEE) with a quadratic 4×4 correlation structure for the minimal adequate model for Cerastoderma edule.

description: Comparison between regression coefficients and robust standard errors of a quasi-Poisson generalized linear model (GLM) and a generalized estimating equation (GEE) with a quadratic 4×4 correlation structure for the minimal adequate model for Cerastoderma edule.
DOI: 10.6084/m9.figshare.3547101.v1
title: Appendix C. Comparison between regression coefficients and robust standard errors of a quasi-Poisson generalized linear model (GLM) and a generalized estimating equation (GEE) with a quadratic 4×4 correlation structure for the minimal adequate model for Cerastoderma edule.

description: Comparison between regression coefficients and robust standard errors of a quasi-Poisson generalized linear model (GLM) and a generalized estimating equation (GEE) with a quadratic 4×4 correlation structure for the minimal adequate model for Cerastoderma edule.
DOI: 10.6084/m9.figshare.3547098
title: Supplement 1. Script for running GEEs in R and using QIC values to select the best model.

description: File List SupplementA – R source code SupplementData.txt – Data file of macrobenthic species counts in the western Dutch Wadden Sea in 2005 <i>All files at once</i> Supplement_Kraan_et_al_Report_09-2040.zip Description SupplementA consists of an R-script to run spatial GEEs and use QIC-values to select the minimal adequate model. This file can be directly used in Tinn-R. SupplementData.txt consists of counts of a number of macrobenthic species inhabiting intertidal flats of the Dutch Wadden Sea in 2005. The columns are: <i>x</i>-coordinate, <i>y</i>-coordinate, median grain-size, distance to gully, inundation time, and the set of macrobenthic species used. Note that, in addition to SupplementA, it is necessary to use the R-script provided by Carl and Kühn (2007, Ecological Modelling 207:159–170) to run spatial GEEs.
DOI: 10.6084/m9.figshare.3547098.v1
title: Supplement 1. Script for running GEEs in R and using QIC values to select the best model.

description: File List SupplementA – R source code SupplementData.txt – Data file of macrobenthic species counts in the western Dutch Wadden Sea in 2005 <i>All files at once</i> Supplement_Kraan_et_al_Report_09-2040.zip Description SupplementA consists of an R-script to run spatial GEEs and use QIC-values to select the minimal adequate model. This file can be directly used in Tinn-R. SupplementData.txt consists of counts of a number of macrobenthic species inhabiting intertidal flats of the Dutch Wadden Sea in 2005. The columns are: <i>x</i>-coordinate, <i>y</i>-coordinate, median grain-size, distance to gully, inundation time, and the set of macrobenthic species used. Note that, in addition to SupplementA, it is necessary to use the R-script provided by Carl and Kühn (2007, Ecological Modelling 207:159–170) to run spatial GEEs.
DOI: 10.6084/m9.figshare.3547095
title: Appendix A. Predictor variables used to estimate response variable.

description: Predictor variables used to estimate response variable.
DOI: 10.6084/m9.figshare.3547092
title: Appendix B. Lidar and optical image products of HBEF, depicting vegetation canopy height, ground elevation, the vertical distribution ratio, canopy complexity, leaf-on NDVI from August, and seasonal change in NDVI between August (leaf-on) and October (leaf-off).

description: Lidar and optical image products of HBEF, depicting vegetation canopy height, ground elevation, the vertical distribution ratio, canopy complexity, leaf-on NDVI from August, and seasonal change in NDVI between August (leaf-on) and October (leaf-off).
DOI: 10.6084/m9.figshare.3547089
title: Appendix C. Boxplots displaying the range in lidar and optical predictor values relative to bird habitat quality indices.

description: Boxplots displaying the range in lidar and optical predictor values relative to bird habitat quality indices.
DOI: 10.6084/m9.figshare.3547083
title: Appendix D. Comparison of predicted vs. observed occupancy among habitat quality groups, as categorized by number of years of Black-throated Blue Warbler presence.

description: Comparison of predicted vs. observed occupancy among habitat quality groups, as categorized by number of years of Black-throated Blue Warbler presence.
DOI: 10.6084/m9.figshare.3547080
title: Appendix E. Same as Appendix D but based on predicting the presence or absence among habitat quality groups in year 4 (2006) based on a model developed using data from three years of observations (1999–2001).

description: Same as Appendix D but based on predicting the presence or absence among habitat quality groups in year 4 (2006) based on a model developed using data from three years of observations (1999–2001).
DOI: 10.6084/m9.figshare.3547080.v1
title: Appendix E. Same as Appendix D but based on predicting the presence or absence among habitat quality groups in year 4 (2006) based on a model developed using data from three years of observations (1999–2001).

description: Same as Appendix D but based on predicting the presence or absence among habitat quality groups in year 4 (2006) based on a model developed using data from three years of observations (1999–2001).
DOI: 10.6084/m9.figshare.3547077
title: Data Paper. Data Paper

description: File List Chytridiomycosis_data_1956_2007.txt -- 10183 records, not including header row. File is ASCII text, comma delimited. No compression schemes were used. Description Chytridiomycosis is the worst disease to affect vertebrate biodiversity on record. In Australia, it is thought to have caused the extinction of four frog species, and it threatens the survival of at least 10 more. We report the current distribution and host range of this invasive disease in Australia, which is essential knowledge for conservation management. We envisage that the data be used in a global and national context for predictive modeling, meta-analyses, and risk assessment. Our continent-wide data set comprises 821 sites in Australia and includes 10183 records from more than 80 contributors spanning collection dates from 1956 to 2007. Sick and dead frogs from the field and apparently healthy frogs from museum collections were tested opportunistically for the presence of Batrachochytrium dendrobatidis, the fungal pathogen causing chytridiomycosis, and apparently healthy frogs and tadpoles found during surveys were tested purposively. The diagnostic tests used were histology of skin samples and quantitative PCR of skin swabs. Chytridiomycosis was found in all Australian states and the Australian Capital Territory, but not in the Northern Territory. It appears to be currently confined to the relatively cool and wet areas of Australia, such as along the Great Dividing Range and adjacent coastal areas in the eastern mainland states of Queensland, New South Wales, and Victoria, eastern and central Tasmania, southern South Australia, and southwestern Western Australia. Batrachochytrium dendrobatidis may have been introduced into Australia via the port of Brisbane around 1978 and spread northward and southward. It did not appear to arrive in Western Australia until 1985. The earliest records from South Australia and Tasmania are from 1995 and 2004, respectively, although archival studies from these states are lacking. We also report negative findings showing that the disease does not currently occur in some areas that appear to be environmentally suitable, including Cape York Peninsula in Queensland and most of the World Heritage Area in western Tasmania. Infection with <i>B. dendrobatidis</i> has been recorded from 63 frog species in Australia to date, all belonging to the Hylidae, Limnodynastidae, and Myobatrachidae, with the exception of one individual of a species from the Microhylidae and the introduced cane toad of the family Bufonidae. <i>Key words: amphibian chytrid fungus; </i>Batrachochytrium dendrobatidis<i>; chytridiomycosis; conservation; distribution; extinction; frog; infectious disease; mapping; risk assessment.</i>
DOI: 10.6084/m9.figshare.3547074
title: Appendix A. A table listing the macroinvertebrate taxa occurring in the tank-bromeliad Aechmea mertensii associated with ant-gardens inhabited by the ants Camponotus femoratus and Pachycondyla goeldii.

description: A table listing the macroinvertebrate taxa occurring in the tank-bromeliad Aechmea mertensii associated with ant-gardens inhabited by the ants Camponotus femoratus and Pachycondyla goeldii.
DOI: 10.6084/m9.figshare.3547074.v1
title: Appendix A. A table listing the macroinvertebrate taxa occurring in the tank-bromeliad Aechmea mertensii associated with ant-gardens inhabited by the ants Camponotus femoratus and Pachycondyla goeldii.

description: A table listing the macroinvertebrate taxa occurring in the tank-bromeliad Aechmea mertensii associated with ant-gardens inhabited by the ants Camponotus femoratus and Pachycondyla goeldii.
DOI: 10.6084/m9.figshare.3547071
title: Appendix A. Analytical model for the directed-dispersal (DrD) paradox (a linear version).

description: Analytical model for the directed-dispersal (DrD) paradox (a linear version).
DOI: 10.6084/m9.figshare.3547071.v1
title: Appendix A. Analytical model for the directed-dispersal (DrD) paradox (a linear version).

description: Analytical model for the directed-dispersal (DrD) paradox (a linear version).
DOI: 10.6084/m9.figshare.3547068
title: Appendix B. Analytical model for the DrD paradox (the quadratic version).

description: Analytical model for the DrD paradox (the quadratic version).
DOI: 10.6084/m9.figshare.3547068.v1
title: Appendix B. Analytical model for the DrD paradox (the quadratic version).

description: Analytical model for the DrD paradox (the quadratic version).
DOI: 10.6084/m9.figshare.3547065
title: Appendix C. Simulation model of a DrD mutant invasion in a random-dispersal population.

description: Simulation model of a DrD mutant invasion in a random-dispersal population.
DOI: 10.6084/m9.figshare.3547065.v1
title: Appendix C. Simulation model of a DrD mutant invasion in a random-dispersal population.

description: Simulation model of a DrD mutant invasion in a random-dispersal population.
DOI: 10.6084/m9.figshare.3547062
title: Appendix D. The effect of variation in the DrD level on mutant establishment.

description: The effect of variation in the DrD level on mutant establishment.
DOI: 10.6084/m9.figshare.3547062.v1
title: Appendix D. The effect of variation in the DrD level on mutant establishment.

description: The effect of variation in the DrD level on mutant establishment.
DOI: 10.6084/m9.figshare.3547059
title: Appendix A. Description of supplementary methods used to study the spatial distribution of Serengeti hotspots.

description: Description of supplementary methods used to study the spatial distribution of Serengeti hotspots.
DOI: 10.6084/m9.figshare.3547059.v1
title: Appendix A. Description of supplementary methods used to study the spatial distribution of Serengeti hotspots.

description: Description of supplementary methods used to study the spatial distribution of Serengeti hotspots.
DOI: 10.6084/m9.figshare.3547056
title: Appendix B. Comparison between relative frequency of available habitat and relative frequency of lion kills for three landscape variables.

description: Comparison between relative frequency of available habitat and relative frequency of lion kills for three landscape variables.
DOI: 10.6084/m9.figshare.3547056.v1
title: Appendix B. Comparison between relative frequency of available habitat and relative frequency of lion kills for three landscape variables.

description: Comparison between relative frequency of available habitat and relative frequency of lion kills for three landscape variables.
DOI: 10.6084/m9.figshare.3547053
title: Appendix C. Results of the model-building procedure and model assessment against independently collected herbivore abundance data.

description: Results of the model-building procedure and model assessment against independently collected herbivore abundance data.
DOI: 10.6084/m9.figshare.3547053.v1
title: Appendix C. Results of the model-building procedure and model assessment against independently collected herbivore abundance data.

description: Results of the model-building procedure and model assessment against independently collected herbivore abundance data.
DOI: 10.6084/m9.figshare.3547050
title: Appendix D. Multiple logistic regression coefficients for the model used to predict the occurrence of Serengeti hotspots.

description: Multiple logistic regression coefficients for the model used to predict the occurrence of Serengeti hotspots.
DOI: 10.6084/m9.figshare.3547050.v1
title: Appendix D. Multiple logistic regression coefficients for the model used to predict the occurrence of Serengeti hotspots.

description: Multiple logistic regression coefficients for the model used to predict the occurrence of Serengeti hotspots.
DOI: 10.6084/m9.figshare.3547047
title: Appendix E. Figures showing additional maps relevant to the analysis of Serengeti hotspots.

description: Figures showing additional maps relevant to the analysis of Serengeti hotspots.
DOI: 10.6084/m9.figshare.3547047.v1
title: Appendix E. Figures showing additional maps relevant to the analysis of Serengeti hotspots.

description: Figures showing additional maps relevant to the analysis of Serengeti hotspots.