cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.947939
title: Computed tomography analysis of multicorer SO268/2_122-1, core 21

description: Selected multicorer cores of R/V Sonne cruise SO268-1 were scanned by a Toshiba Aquilion 64 computer tomograph (CT) at the hospital Klinikum Bremen-Mitte with an x-ray source voltage of 120 kV and a current of 600 mA. The CT image stacks have a resolution of 0.35 mm in x/y-direction and 0.5 mm resolution in z-direction (0.3 mm reconstruction unit). Images were reconstructed using Toshiba's patented helical cone beam reconstruction technique (TCOT) and are provided in DICOM-format. The data were processed with the ZIB edition of the Amira software (version 2021.03; Stalling et al., 2005; http://amira.zib.de). Within Amira, the core liners, including about 2 mm of the core rims, were deleted from the data set. Mangan nodules with diameters &gt;1 mm, open bioturbation traces, an unidentified organism (only present in core SO268-2-200-1 MC18), the natural bioturbated and surficial homogenised sediment were segmented by a marker-based watershed segmentation and visualized in 3D. Subsequently, the sediment components were quantified (MaterialStatistics module; volume per slice) and the mean and standard deviation of the sediment x-ray attenuation (MaterialStatistics module; statistics per slice per label; to avoid marginal averaging effects the sediment label was reduced by three voxels) were determined.
DOI: 10.60712/si-id404021.1
title: StrainInfo SI-ID 404021.1

description: StrainInfo dataset 404021 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404118.1
title: StrainInfo SI-ID 404118.1

description: StrainInfo dataset 404118 about a strain of Bacillus pumilus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404119.1
title: StrainInfo SI-ID 404119.1

description: StrainInfo dataset 404119 about a strain of Modestobacter. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404120.1
title: StrainInfo SI-ID 404120.1

description: StrainInfo dataset 404120 about a strain of Methylosinus acidophilus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404194.1
title: StrainInfo SI-ID 404194.1

description: StrainInfo dataset 404194 about a strain of Polynucleobacter paneuropaeus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.9vkrnu
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Gastrodia elata Blume"
 ]
}

 The dataset includes 135 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086339-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/u2p2s3
title: Floristic Study in Orchards - Beira Interior, Portugal

description: This dataset consists of a floristic study in apple and pear orchards, with the aim of knowing the distribution and importance of the weed flora and its correlation with the surrounding soil-climatic and phyto-technical factors, in Beira Interior, Portugal.
DOI: 10.60712/si-id404195.1
title: StrainInfo SI-ID 404195.1

description: StrainInfo dataset 404195 about a strain of Alkalihalophilus marmarensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404196.1
title: StrainInfo SI-ID 404196.1

description: StrainInfo dataset 404196 about a strain of Streptomyces. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404022.1
title: StrainInfo SI-ID 404022.1

description: StrainInfo dataset 404022 about a strain of Protomyces arabidopsidicola. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404023.1
title: StrainInfo SI-ID 404023.1

description: StrainInfo dataset 404023 about a strain of Macrococcus armenti. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404024.1
title: StrainInfo SI-ID 404024.1

description: StrainInfo dataset 404024 about a strain of Streptomyces ziwulingensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404025.1
title: StrainInfo SI-ID 404025.1

description: StrainInfo dataset 404025 about a strain of Halopolyspora algeriensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.yitynk
title: Occurrence Download

description: A dataset containing 491 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Erithacus akahige (Temminck, 1835)",
 "TaxonKey is Erithacus akahige tanensis Kuroda, 1923",
 "TaxonKey is Erithacus akahige akahige"
 ]
}

 The dataset includes 491 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000698-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id404121.1
title: StrainInfo SI-ID 404121.1

description: StrainInfo dataset 404121 about a strain of Mattirolomyces terfezioides. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404122.1
title: StrainInfo SI-ID 404122.1

description: StrainInfo dataset 404122 about a strain of Corynebacterium pseudogenitalium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404123.1
title: StrainInfo SI-ID 404123.1

description: StrainInfo dataset 404123 about a strain of Rufibacter ruber. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404124.1
title: StrainInfo SI-ID 404124.1

description: StrainInfo dataset 404124 about a strain of Methyloversatilis universalis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404125.1
title: StrainInfo SI-ID 404125.1

description: StrainInfo dataset 404125 about a strain of Nocardioides cavernae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404197.1
title: StrainInfo SI-ID 404197.1

description: StrainInfo dataset 404197 about a strain of Paenibacillus rhizophilus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404198.1
title: StrainInfo SI-ID 404198.1

description: StrainInfo dataset 404198 about a strain of Alkalibacterium putridalgicola. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404199.1
title: StrainInfo SI-ID 404199.1

description: StrainInfo dataset 404199 about a strain of Virgibacillus byunsanensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404200.1
title: StrainInfo SI-ID 404200.1

description: StrainInfo dataset 404200 about a strain of Jatrophihabitans fulvus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id404201.1
title: StrainInfo SI-ID 404201.1

description: StrainInfo dataset 404201 about a strain of Flavobacterium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.i1eunw
title: Occurrence Download

description: A dataset containing 148228 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Coturnix coturnix (Linnaeus, 1758)",
 "TaxonKey is Coturnix coturnix coturnix",
 "TaxonKey is Coturnix coturnix erlangeri Zedlitz, 1912",
 "TaxonKey is Coturnix coturnix inopinata E.Hartert, 1917",
 "TaxonKey is Coturnix coturnix africana Temminck & Schlegel, 1849",
 "TaxonKey is Coturnix coturnix japonica Temminck & Schlegel, 1849",
 "TaxonKey is Coturnix coturnix confisa E.Hartert, 1917"
 ]
}

 The dataset includes 148228 records from 277 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000589-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29128280
title: PONE-D-24-33064R6- Manuscript

description: The emergence and re-emergence of zoonotic bacterial infections and the upsurge reflected in current trends of antimicrobial-resistant bacteria is a major global concern.<b> </b><i>Salmonella</i> spp and <i>Escherichia coli (E.</i> <i>coli)</i><i> </i>are the two most important food-borne pathogens of public health interest incriminated in poultry products worldwide. AMR in poultry farming poses a significant public health risk in Uganda, as the misuse and overuse of antibiotics in livestock can lead to the emergence of resistant pathogens that may transfer to humans through direct contact, consumption of contaminated poultry products, or environmental exposure, further complicating the management of infection hence necessitating constant monitoring of microbial food safety measures.<b>Methods:</b> This study was a cross-sectional study that used a total of two hundred sixteen poultry samples from cloacae swabs and fecal swabs collected from broiler poultry farms. These were cultured on Chromagar <sup>TM </sup><i>Salmonella</i> and Sorbitol MacConkey agar. Biochemical tests, minimum inhibitory concentration, and polymerase chain reaction were utilized. Data was analyzed by descriptive statistics, and Chi-square (χ²) Test statistical significance of quantitative data.<b>Results</b>: A total of 40 (18.5%) <i>Salmonella</i> and 120 (55.6%) pathogenic <i>E</i><i>. c</i><i>o</i><i>l</i><i>i</i> were isolated while extended beta-lactamase (ESBL) production was detected in 18 <i>Salmonella</i> and 57 pathogenic <i>E. coli </i>isolates. Prevalence of <i>bla</i>TEM gene was expressed in 7/18 (39%) <i>Salmonella</i> isolates and 42/57 (73.8%) Pathogenic <i>E. coli</i> isolates The significant associated factors that predisposed these farms to <i>Salmonella</i> spp was source of poultry feeds (p-value = 0.066) while factors associated with pathogenic <i>E. coli</i> included contact of poultry with other birds and livestock (p-value =0.020), movement from one pen to the other by farm-handlers (p-value = 0.017), use of untreated water (p-value =0.018) and food contamination of commercial poultry feeds (p-value= 0.0021).
DOI: 10.6084/m9.figshare.29128280.v1
title: PONE-D-24-33064R6- Manuscript

description: The emergence and re-emergence of zoonotic bacterial infections and the upsurge reflected in current trends of antimicrobial-resistant bacteria is a major global concern.<b> </b><i>Salmonella</i> spp and <i>Escherichia coli (E.</i> <i>coli)</i><i> </i>are the two most important food-borne pathogens of public health interest incriminated in poultry products worldwide. AMR in poultry farming poses a significant public health risk in Uganda, as the misuse and overuse of antibiotics in livestock can lead to the emergence of resistant pathogens that may transfer to humans through direct contact, consumption of contaminated poultry products, or environmental exposure, further complicating the management of infection hence necessitating constant monitoring of microbial food safety measures.<b>Methods:</b> This study was a cross-sectional study that used a total of two hundred sixteen poultry samples from cloacae swabs and fecal swabs collected from broiler poultry farms. These were cultured on Chromagar <sup>TM </sup><i>Salmonella</i> and Sorbitol MacConkey agar. Biochemical tests, minimum inhibitory concentration, and polymerase chain reaction were utilized. Data was analyzed by descriptive statistics, and Chi-square (χ²) Test statistical significance of quantitative data.<b>Results</b>: A total of 40 (18.5%) <i>Salmonella</i> and 120 (55.6%) pathogenic <i>E</i><i>. c</i><i>o</i><i>l</i><i>i</i> were isolated while extended beta-lactamase (ESBL) production was detected in 18 <i>Salmonella</i> and 57 pathogenic <i>E. coli </i>isolates. Prevalence of <i>bla</i>TEM gene was expressed in 7/18 (39%) <i>Salmonella</i> isolates and 42/57 (73.8%) Pathogenic <i>E. coli</i> isolates The significant associated factors that predisposed these farms to <i>Salmonella</i> spp was source of poultry feeds (p-value = 0.066) while factors associated with pathogenic <i>E. coli</i> included contact of poultry with other birds and livestock (p-value =0.020), movement from one pen to the other by farm-handlers (p-value = 0.017), use of untreated water (p-value =0.018) and food contamination of commercial poultry feeds (p-value= 0.0021).
DOI: 10.15468/dl.e2jzmd
title: Occurrence Download

description: A dataset containing 1334 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Eulaema Lepeletier, 1841"
 ]
}

 The dataset includes 1334 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007002-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.apgmz5
title: Occurrence Download

description: A dataset containing 455239 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chlidonias hybrida)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 455239 records from 545 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050209-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kjywfx
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rubia tinctorum",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 46 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050235-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m9w7rc
title: Occurrence Download

description: A dataset containing 291 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heracleum sosnowskyi",
 "Country is Belarus",
 "HasCoordinate is true"
 ]
}

 The dataset includes 291 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050236-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.chukmb
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heracleum sosnowskyi",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050237-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvfrgu
title: Occurrence Download

description: A dataset containing 43867 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Campylium stellatum"
 ]
}

 The dataset includes 43867 records from 400 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050234-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ft6qe2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Kryptopterus piperatus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050240-250717081556266/datasets/export for details.
DOI: 10.15468/dl.nmmjkk
title: Occurrence Download

description: A dataset containing 604 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heracleum sosnowskyi",
 "Country is Estonia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 604 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050241-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y78cby
title: Occurrence Download

description: A dataset containing 610885 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chlidonias niger)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 610885 records from 726 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050216-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejd22a
title: Occurrence Download

description: A dataset containing 2960 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "OccurrenceStatus is Present",
 "TaxonKey is Puma Jardine, 1834",
 "Year 1996-2022"
 ]
}

 The dataset includes 2960 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228624-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mm2a3y
title: Occurrence Download

description: A dataset containing 12467 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is New Zealand",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chlidonias albostriatus (G.R.Gray, 1845)"
 ]
}

 The dataset includes 12467 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224783-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zm6w2p
title: Occurrence Download

description: A dataset containing 652 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Manis pentadactyla Linnaeus, 1758"
 ]
}

 The dataset includes 652 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0203885-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4treak
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Macroalgas del atolón Albuquerque durante la Expedición Seaflower 2018 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 95 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228628-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhceua
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anyphaena ayshides Yaginuma, 1958",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208422-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ye36vt
title: Occurrence Download

description: A dataset containing 9910 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aesculus californica (Spach) Nutt."
 ]
}

 The dataset includes 9910 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0258759-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.