cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26719344.v1
title: Additional file 5 of Transcript and protein signatures derived from shared molecular interactions across cancers are associated with mortality

description: Additional file 5: S1. shared-MCTM. S2. GWAS enrichment for shMCTM genes.
DOI: 10.15468/dl.pdvvyw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.564886 -33.656076, 148.564886 -33.662813, 148.573869 -33.662813, 148.573869 -33.658322, 148.569378 -33.658322, 148.569378 -33.656076, 148.564886 -33.656076))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069432-240626123714530/datasets/export for details.
DOI: 10.15468/dl.v2dvfx
title: Occurrence Download

description: A dataset containing 835 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material citation, Material sample)",
 "DatasetKey is one of (Algunas especies de anfibios y reptiles contenidos en el Proyecto de Norma Oficial Mexicana PROY-NOM-059-ECOL-2000, Computarización de las colecciones de vertebrados terrestres de la Escuela Nacional de Ciencias Biológicas, IPN Fase 4 (Anfibios y reptiles), Anfibiofauna endémica frente al cambio climático: análisis de sensibilidad e incertidumbre, Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (vertebrados), KUBI Herpetology Collection, Apoyo a las colecciones biológicas de la Facultad de Ciencias de la UNAM: Fase 1 (MZFC_HE), Apoyo a las colecciones biológicas de la Facultad de Ciencias de la UNAM: Fase 1 (Herpetológica), TNHC Herpetology Collection, NMNH Extant Specimen Records (USNM, US), Colección de Tejidos, Centro Interdisciplinario de Investigación para el Desarrollo Integral Regional, Unidad Durango, Instituto Politécnico Nacional (TD).)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is one of (ff90b050-c256-11db-b71b-b8a03c50a862, 3c6ad080-bdbe-11da-ac59-b8a03c50a862, b554c320-0560-11d8-b851-b8a03c50a862, bc092ff0-02e4-11dc-991f-b8a03c50a862, 84cee304-27b4-4ad0-9068-16b666e5b1b5, 8edbbde0-055e-11d8-b850-b8a03c50a862, 4cadac10-3e7b-11d9-8439-b8a03c50a862, 52c8f620-1816-11da-9544-b8a03c50a862, 6ea87510-0561-11d8-b851-b8a03c50a862, 927f1e70-cf74-11d8-bf68-b8a03c50a862)",
 "TaxonKey is Dryophytes plicatus (Brocchi, 1877)",
 "Year 1950-2024"
 ]
}

 The dataset includes 835 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069431-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26719347
title: Additional file 6 of Transcript and protein signatures derived from shared molecular interactions across cancers are associated with mortality

description: Additional file 6: S1. Compare signature mRNA expression in tumor and normal in TCGA cohort. S2. Compare signature mRNA expression in tumor and normal in UKBB cohort. Cox results for the association of each signature gene and 10-year overall moratlity in all TCGA cancer patients. Cox results for the association of signature score and 10-year overall moratlity in each TCGA cancer. Cox results for the association of each signature gene and 10-year overall moratlity in all UKBB cancer patients. Cox results for the association of signature score and 10-year overall moratlity in each UKBB cancer.
DOI: 10.6084/m9.figshare.26620870.v1
title: Additional file 2 of A simplified bacterial community found within the epidermis than at the epidermal surface of atopic dermatitis patients and healthy controls

description: Additional file 2: Table S1. Complete ASV table for all samples and negatives. Table S2. Complete metadata table for all samples and negatives. Table S3. Pairwise comparisons for community composition and ASV richness. Table S4. ASVs that were assessed for significant variation in relative abundance across the epidermis. Table S5. Significant differences in the relative abundance (%) of bacterial families between epidermal layers was tested for using mixed linear modelling. Table S6. Paired t-tests were performed to identify the individual ASVs that were significantly different between surface swabs and tape-1 samples. Table S7. Pairwise comparisons for community composition and ASV richness. Table S8. Pairwise comparisons for community composition and ASV richness between skin groups. Table S9. Significant differences in community composition and ASV richness were tested for between AD patients with and without filaggrin mutations. Table S10. Significant differences in community composition and ASV richness were tested for between AD patients that were using topical steroids (none, short, medium and long-term use). Table S11. Reads assigned to Staphylococcus ASVs were extracted and underwent analyses for signifcaint community variation, differences in relative abundance and ASV richness.
DOI: 10.15468/dl.g7axbh
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "DatasetKey is one of (Herbario Museo de La Salle Bogotá (BOG), Herbario Universidad de Antioquia (HUA), Herbario Jardín Botánico de Cartagena \"Guillermo Piñeres\", Herbario Nacional Colombiano (COL), Herbario Universidad de Caldas - FAUC, Herbario Universidad del Quindío, Colección Herbario Federico Medem Bogotá - FMB, Colección general del plantas vasculares del Herbario JBB)",
 "OccurrenceStatus is Present",
 "TaxonKey is Chlorophytum comosum (Thunb.) Jacques"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069433-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26620870
title: Additional file 2 of A simplified bacterial community found within the epidermis than at the epidermal surface of atopic dermatitis patients and healthy controls

description: Additional file 2: Table S1. Complete ASV table for all samples and negatives. Table S2. Complete metadata table for all samples and negatives. Table S3. Pairwise comparisons for community composition and ASV richness. Table S4. ASVs that were assessed for significant variation in relative abundance across the epidermis. Table S5. Significant differences in the relative abundance (%) of bacterial families between epidermal layers was tested for using mixed linear modelling. Table S6. Paired t-tests were performed to identify the individual ASVs that were significantly different between surface swabs and tape-1 samples. Table S7. Pairwise comparisons for community composition and ASV richness. Table S8. Pairwise comparisons for community composition and ASV richness between skin groups. Table S9. Significant differences in community composition and ASV richness were tested for between AD patients with and without filaggrin mutations. Table S10. Significant differences in community composition and ASV richness were tested for between AD patients that were using topical steroids (none, short, medium and long-term use). Table S11. Reads assigned to Staphylococcus ASVs were extracted and underwent analyses for signifcaint community variation, differences in relative abundance and ASV richness.
DOI: 10.15468/dl.zumc3g
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "PublishingOrg is one of (eac88d99-9f6c-4031-8fc4-8088f0e0dfe7, 52e610d2-1b33-4c04-b3b5-6f4763a5fe65, 4c43ef1b-b005-4ed5-840b-7886d53fb069, 2a7e3080-28a9-11dd-97cd-b8a03c50a862, ab13adb9-ce23-444d-87c9-ce41f03ef2b3, eace4687-50e8-4f9a-829b-29ff8ff1fa8b, f7f9717e-9e50-4a00-a30f-7b134390a566, bc092ff0-02e4-11dc-991f-b8a03c50a862, 58c7e325-82fc-446d-9406-851b4d357db7)",
 "TaxonKey is Bougainvillea spectabilis Willd."
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069434-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zvpxa6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.596327 -33.656076, 148.596327 -33.662813, 148.603065 -33.662813, 148.603065 -33.658322, 148.598573 -33.658322, 148.598573 -33.656076, 148.596327 -33.656076))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069435-240626123714530/datasets/export for details.
DOI: 10.15468/dl.9s7kz8
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (f7f9717e-9e50-4a00-a30f-7b134390a566, eace4687-50e8-4f9a-829b-29ff8ff1fa8b, cccff716-2694-4209-9f9e-2f7a484465a0, a7e6d0ba-9e3d-4be2-b3ac-2c5e812e0a31, 58c7e325-82fc-446d-9406-851b4d357db7)",
 "TaxonKey is Bellis perennis L."
 ]
}

 The dataset includes 12 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069436-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pd2z4j
title: Occurrence Download

description: A dataset containing 194 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((147.25334 -33.656076, 147.255585 -33.656076, 147.255585 -33.647093, 147.26906 -33.647093, 147.26906 -33.642601, 147.262323 -33.642601, 147.262323 -33.640355, 147.25334 -33.640355, 147.25334 -33.656076)), ((147.25334 -33.656076, 147.248848 -33.656076, 147.248848 -33.658322, 147.242111 -33.658322, 147.242111 -33.662813, 147.248848 -33.662813, 147.248848 -33.665059, 147.246602 -33.665059, 147.246602 -33.669551, 147.262323 -33.669551, 147.262323 -33.671796, 147.26906 -33.671796, 147.26906 -33.669551, 147.271306 -33.669551, 147.271306 -33.662813, 147.264569 -33.662813, 147.264569 -33.665059, 147.257831 -33.665059, 147.257831 -33.662813, 147.25334 -33.662813, 147.25334 -33.656076)))"
 ]
}

 The dataset includes 194 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069437-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.92gbnd
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((123.15101 -36.68516,123.79029 -35.6033,123.54441 -34.61978,122.85595 -32.35769,118.43013 -32.11181,116.16804 -26.16154,115.77463 -25.66978,113.66007 -27.14505,109.77518 -25.27637,113.26667 -36.29176,123.15101 -36.68516))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pseudorhiza von Lendenfeld, 1882"
 ]
}

 The dataset includes 62 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069438-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26720175.v1
title: Additional file 2 of PrimerEvalPy: a tool for in-silico evaluation of primers for targeting the microbiome

description: Additional file 2: Oral-archaea database of the 16S rRNA gene sequences which was used for the coverage analysis.
DOI: 10.15468/dl.mrmefv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.25272 -33.658322, 148.25272 -33.662813, 148.259458 -33.662813, 148.259458 -33.658322, 148.25272 -33.658322))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069439-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.13300722
title: Reno-protective Effects of Empagliflozin in High Fat Diet Induced Obesity-Related Glomerulopathy by Regulation of Gut-Kidney Axis
DOI: 10.5281/zenodo.13300723
title: Reno-protective Effects of Empagliflozin in High Fat Diet Induced Obesity-Related Glomerulopathy by Regulation of Gut-Kidney Axis
DOI: 10.6084/m9.figshare.24223888.v1
title: Additional file 2 of Interaction between phenylpropane metabolism and oil accumulation in the developing seed of Brassica napus revealed by high temporal-resolution transcriptomes

description: Additional file 2: Table S1. Summary of RNA sequencing. Table S2. Correlation between biological replicates and different time points. Table S3. Summary of seed-specific genes. Table S4. Summary of marker genes in each core module. Table S5. Summary of genes in each co-expression network module. Table S6. Summary of acyl-lipid genes in each core module. Table S7. Summary of phenylalanine genes in each core module. Table S8. Summary of MapMan enrichment results of floralwhite (stage I) module. Table S9. Summary of MapMan enrichment results of brown2 (stage II) module. Table S10. Summary of MapMan enrichment results of palevioletred2 (stage III) module. Table S11. Summary of MapMan enrichment results of darkorange2 (stage IV) module. Table S12. Summary of MapMan enrichment results of midnightblue (stage V) module. Table S13. Summary of hub genes in each co-expression network module. Table S14. Summary of genes integrated from co-expression network and TWAS-significant genes. Table S15. Summary of acyl-lipid genes in TT5, BAN and TT19 co-expression network. Table S16. Summary of acyl-lipid genes in TT5, BAN, TT19 and TT1 co-expression network. Table S17. Summary of candidate genes that expression significant correlation with seed oil content and seed coat content in co-expression network of FAs biosynthesis genes. Table S18. Summary of candidate genes that expression significant correlation with oil content and seed coat content in co-expression network of acyl-related genes. Table S19. Seed-specific transcription factors overlapped with TWAS-significant genes or co-expression network hub genes. Table S20. Seed-specific transcription factors that significantly correlated with SOC. Table S21. Summary of genes in EIL5, ERF12 and GATA19 co-expression network. Table S22. Summary of acyl-lipid genes in EIL5, ERF12 and GATA19 co-expression network. Table S23. The binding site information in the promoter of genes that are coregulated by EIL5, ERF12 and GATA19. Table S24. Summary of acyl-lipid genes in ZS11. Table S25. Summary of phenylalanine genes in ZS11. Table S26. Primers used for qRT-PCR.
DOI: 10.15468/dl.tt8rfa
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.495267 -33.658322, 148.495267 -33.662813, 148.499758 -33.662813, 148.499758 -33.665059, 148.506496 -33.665059, 148.506496 -33.662813, 148.50425 -33.662813, 148.50425 -33.658322, 148.495267 -33.658322))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069440-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.24223888
title: Additional file 2 of Interaction between phenylpropane metabolism and oil accumulation in the developing seed of Brassica napus revealed by high temporal-resolution transcriptomes

description: Additional file 2: Table S1. Summary of RNA sequencing. Table S2. Correlation between biological replicates and different time points. Table S3. Summary of seed-specific genes. Table S4. Summary of marker genes in each core module. Table S5. Summary of genes in each co-expression network module. Table S6. Summary of acyl-lipid genes in each core module. Table S7. Summary of phenylalanine genes in each core module. Table S8. Summary of MapMan enrichment results of floralwhite (stage I) module. Table S9. Summary of MapMan enrichment results of brown2 (stage II) module. Table S10. Summary of MapMan enrichment results of palevioletred2 (stage III) module. Table S11. Summary of MapMan enrichment results of darkorange2 (stage IV) module. Table S12. Summary of MapMan enrichment results of midnightblue (stage V) module. Table S13. Summary of hub genes in each co-expression network module. Table S14. Summary of genes integrated from co-expression network and TWAS-significant genes. Table S15. Summary of acyl-lipid genes in TT5, BAN and TT19 co-expression network. Table S16. Summary of acyl-lipid genes in TT5, BAN, TT19 and TT1 co-expression network. Table S17. Summary of candidate genes that expression significant correlation with seed oil content and seed coat content in co-expression network of FAs biosynthesis genes. Table S18. Summary of candidate genes that expression significant correlation with oil content and seed coat content in co-expression network of acyl-related genes. Table S19. Seed-specific transcription factors overlapped with TWAS-significant genes or co-expression network hub genes. Table S20. Seed-specific transcription factors that significantly correlated with SOC. Table S21. Summary of genes in EIL5, ERF12 and GATA19 co-expression network. Table S22. Summary of acyl-lipid genes in EIL5, ERF12 and GATA19 co-expression network. Table S23. The binding site information in the promoter of genes that are coregulated by EIL5, ERF12 and GATA19. Table S24. Summary of acyl-lipid genes in ZS11. Table S25. Summary of phenylalanine genes in ZS11. Table S26. Primers used for qRT-PCR.
DOI: 10.6084/m9.figshare.26719485
title: Additional file 2 of Effect of fence tray matching care on excess adhesive and bracket placement accuracy for orthodontic bonding: an in vitro study

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26722788
title: Additional file 1 of Asking patients if they have any questions can help improve patient satisfaction with medical team communication in the emergency department

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26621143.v1
title: Additional file 5 of Time course of changes in the transcriptome during russet induction in apple fruit

description: Supplementary Material 5
DOI: 10.15468/dl.94vyu3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.618785 -33.658322, 148.618785 -33.662813, 148.625523 -33.662813, 148.625523 -33.658322, 148.618785 -33.658322))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069441-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pfesjy
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Chlamydotis macqueenii (J.E.Gray, 1832)",
 "Year 2004-2023"
 ]
}

 The dataset includes 27 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069442-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24223891
title: Additional file 2 of A microglial activity state biomarker panel differentiates FTD-granulin and Alzheimer’s disease patients from controls

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.24223891.v1
title: Additional file 2 of A microglial activity state biomarker panel differentiates FTD-granulin and Alzheimer’s disease patients from controls

description: Supplementary Material 2
DOI: 10.15468/dl.xb5w5f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.376859 -33.662813, 147.376859 -33.665059, 147.379104 -33.665059, 147.379104 -33.662813, 147.376859 -33.662813))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069443-240626123714530/datasets/export for details.
DOI: 10.15468/dl.ywhbs5
title: Occurrence Download

description: A dataset containing 2645 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material citation, Material sample)",
 "DatasetKey is one of (Arizona State University Herpetology Collection, Anfibios y reptiles de las regiones 30 (Parque Natural Sierra Maderas del Carmen); 31 (Sierra El Burro-Río San Rodrigo); 36 (Sierra La Encantada); y 37 (Sierra El Pino), Coahuila, Anfibios y reptiles de las regiones 30 (Parque Natural Sierra Maderas del Carmen); 31 (Sierra El Burro-Río San Rodrigo); 36 (Sierra La Encantada); y 37 (Sierra El Pino), Coahuila, Computarización de las colecciones de vertebrados terrestres de la Escuela Nacional de Ciencias Biológicas, IPN Fase 4 (Anfibios y reptiles), MSB Amphibian and Reptile Collection (Arctos), LACM Vertebrate Collection, MVZ Herp Collection (Arctos), CAS Herpetology (HERP), UTEP Herpetology (Arctos), KUBI Herpetology Collection)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is one of (ff90b050-c256-11db-b71b-b8a03c50a862, 814cdfb5-d4f8-4453-815f-ea5df98e76bf, 939ed180-aa7b-11db-8edf-b8a03c50a862, 493fe050-055d-11d8-b84f-b8a03c50a862, 8edbbde0-055e-11d8-b850-b8a03c50a862, 66522820-055c-11d8-b84e-b8a03c50a862, 52c8f620-1816-11da-9544-b8a03c50a862, b554c320-0560-11d8-b851-b8a03c50a862)",
 "TaxonKey is Dryophytes arenicolor (Cope, 1866)",
 "Year 1950-2024"
 ]
}

 The dataset includes 2645 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069445-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14278/rodare.3090
title: Evaluation data set for the GravelSensor

description: In this study, we used gamma-ray computed tomography (GammaCT) as reference measurement system to evaluate a novel, non-destructive, smart gravel sensor that is based on the well-known wire-mesh sensor. Various sediment fillings with different infiltrating particle sizes are applied to the gravel sensor and the generated particle holdup is locally determined with both measurement systems simultaneously.
description: Gefördert durch die DFG
DOI: 10.14278/rodare.3089
title: Evaluation data set for the GravelSensor

description: In this study, we used gamma-ray computed tomography (GammaCT) as reference measurement system to evaluate a novel, non-destructive, smart gravel sensor that is based on the well-known wire-mesh sensor. Various sediment fillings with different infiltrating particle sizes are applied to the gravel sensor and the generated particle holdup is locally determined with both measurement systems simultaneously.
description: Gefördert durch die DFG