cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22567018.v1
title: Supplementary Material for: Percutaneous trans-esophageal gastrostomy for oral intake in a case of anastomotic obstruction following total gastrectomy

description: Gastric cancer is one of the most common diseases globally. Total gastrectomy is often performed surgically. However, late-stage anastomotic passage obstruction after total gastrectomy is relatively rare. Here, we report a case involving a 73-year-old male patient who experienced repeated aspiration pneumonia due to anastomotic passage obstruction 22 years after a total gastrectomy for gastric cancer. He was eventually hospitalized in the Department of Gastroenterology at our hospital because of difficulty eating. Computed tomography revealed prominent dilation of the esophagus and the blind end of the elevated jejunum. Upper gastrointestinal endoscopy revealed a poorly extended site on the main side of the elevated jejunum; however, the passage through the scope was good. A percutaneous trans-esophageal gastrostomy was performed for oral intake. The patient experienced decreased nausea and vomiting. He gained weight and his general condition improved. He did not feel inconvenienced by percutaneous trans-esophageal gastrostomy and had no desire for surgery. Follow-up observations are currently being conducted, with tubes exchanged every 6 months. There are no reports of percutaneous trans-esophageal gastrostomy for oral intake for anastomotic passage obstruction following total gastrectomy; therefore, we report this as a reference when similar cases are encountered.
DOI: 10.25387/g3.6214010.v1
title: Supplemental material for Lucot et al., 2018

description: <b>Table S1. <i>VPS11 </i>PERCENT IDENTITY MATRIX AT THE AMINO ACID LEVEL </b>
DOI: 10.6084/m9.figshare.9211076.v2
title: of Prediction of Studentâ s performance by modelling small dataset size

description: of Prediction of Studentâ s performance by modelling small dataset size
DOI: 10.6084/m9.figshare.11477949.v2
title: MPI ocean pCO2 testbed

description: This dataset contains select variables from 25 randomly selected members from the MPI grand ensemble (MPI-GE). Each variable is interpolated from the native grid to a 1x1 degree lat/lon grid. The variables are monthly over the 1982-2017 time frame. Each variable has been sampled as the SOCATv5 data product. RCP8.5 is used after 2005. <br> The intent of this testbed is to evaluate ocean pCO2 gap-filling methods. <br> <strong>Extracting variables</strong> <em>&gt;&gt; unzip file.zip</em>
DOI: 10.6084/m9.figshare.5573296.v1
title: GRHL2

description: GRHL2 ChIP-Seq data
DOI: 10.6084/m9.figshare.28755455.v1
title: Seurat_dataset_Tang(RDS)

description: single-cell RNA-seq of leaf cells infected by fungal pathogen Colletotrichum
DOI: 10.6084/m9.figshare.1594815.v1
title: Data set: A-mode ultrasound & Bod Pod

description: Data set for articles that include A-mode ultrasound and/or BOD POD data from NCAA athlete sample.
DOI: 10.6084/m9.figshare.22134731.v1
title: Raouf_Dartag PVA data.xlsx

description: Genotypic data for maize Provitamin A inbred lines for diversity assessment and heterotic grouping
DOI: 10.6084/m9.figshare.23925072.v1
title: Key_words_RG_and_UP.xlsx

description: List of keywords found with "R" in articles about the Russo-Ukrainian war published by Rossiyskaya Gazeta and Ukrayinska Pravda
DOI: 10.6084/m9.figshare.28732901.v1
title: Chemical reasoning in LLMs unlocks steerable synthesis planning and reaction mechanism elucidation

description: Datasets used and generated for the work "Chemical reasoning in LLMs unlocks steerable synthesis planning and reaction mechanism elucidation".
DOI: 10.6084/m9.figshare.7519154.v1
title: Reliability of adenoid hypertrophy diagnosis by cephalometric radiography

description: OBJECTIVE: To verify the reliability of adenoid hypertrophy diagnosis by cephalometric radiography. METHOD: Thirty male subjects, aged between 12 and 15 years, either mouth-breathers, or not, were selected. Diagnostic tests for adenoid hypertrophy were performed by radiological cephalometry based on lateral cephalometric radiographs and nasal endoscopy (gold standard). The CefX Cephalometric software program, version 2000 was used and the rhinoscopy was performed with a flexible endoscope. Blockage of 47% and 75% of the nasopharynx were taken as the cutoff points for cephalometric radiography and endoscopy, respectively. RESULTS: The correlation between the two examinations was considered moderately positive (0.5). Tests of validity and reliability reported a sensitivity of 100%; specificity 65.5%; positive predictive value of 9.1%; negative predictive value 100%, and exactness of 66.60%. CONCLUSION: Lateral cephalometric radiography was considered practical and comfortable for the patient; relatively efficient for detecting adenoid hypertrophy and obtaining the diagnosis of nasopharyngeal airway obstruction.
DOI: 10.6084/m9.figshare.28470515.v3
title: Mitochondrial genes derived from transcriptomic and GenBank files of Tellinoidea

description: Mitochondrial genes derived from transcriptomic data of Tellinoidea species acquired from NCBl SRA Database.<br>
DOI: 10.6084/m9.figshare.9916328.v1
title: Raw data for Fecchio et al 2019: An inverse latitudinal gradient in infection probability and phylogenetic diversity for Leucocytozoon blood parasites in New World birds

description: This .csv file contains individual-level observations of <i>Leucocytozoon</i> parasite infection status for birds sampled in the New World. The data was used to generate analyses presented in Fecchio et al (2019) <i>An inverse latitudinal gradient in infection probability and phylogenetic diversity for Leucocytozoon blood parasites in New World birds</i>, published in Journal of Animal Ecology.
DOI: 10.6084/m9.figshare.26702314.v4
title: data of Coral-Adapter

description: code and data of Coral-Adapter
DOI: 10.6084/m9.figshare.27932937.v1
title: Supplementary Material for: Antibody response to SARS-CoV2 before and after the third vaccination in patients with Inflammatory Bowel Disease

description: Introduction
Patients with inflammatory bowel disease (IBD) receiving immunosuppressive therapy might have an increased risk of developing a severe course of SARS-CoV-2 infection. The aim of this study was to investigate the development of antibodies in immunosuppressed patients with IBD compared to a healthy control group and to determine the effect of immunmodulators on the level of anti-SARS-CoV-2 IgG antibody levels before and after a third vaccination against SARS-CoV-2.
Methods 
This is a single-center study with a retrospective observational design. Seventy-one IBD patients matched by propensity score to 71 healthy employees (control group) were included. Blood was taken from both groups at predetermined times before and after the third booster vaccination. 
Results
All patients with IBD (n=71, 100%) received immunomodulatory therapy. The mean antibody level before the third vaccination was 1352.88 U/ml (SD= 1011.489) in the IBD group and were not lower compared to the control group (p= 0.088). Gender, age, and disease duration had no significant impact on the development of antibody levels. Patients with TNF-alpha blockers had significantly lower antibody titers (p=0.011) compared to the control group. Patients with integrin inhibitor therapy had significantly higher antibody titers (p=0.003) than the controls. After the third vaccination, an increase in antibody titers was recorded in all patients in the IBD group. 
Conclusion
We recorded an antibody titer in all patients with IBD that was not significantly lower compared to healthy controls despite immunomodulatory therapy. The booster vaccination led to an increase in antibody levels in all patients with IBD.
DOI: 10.6084/m9.figshare.28444610.v2
title: IHBS Data

description: IHBS data
DOI: 10.6084/m9.figshare.3530927.v1
title: Appendix A. Survivorship data for the 58 mammal species considered in survivorship analysis.

description: Survivorship data for the 58 mammal species considered in survivorship analysis.
DOI: 10.15468/dl.46gbve
title: Occurrence Download

description: A dataset containing 1109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Cantharis flavilabris Fallén, 1807"
 ]
}

 The dataset includes 1109 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009555-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.22317706.v1
title: Data by Schneider et al. (2017) Mapping Functional Diversity from Remotely Sensed Morphological and Physiological Forest Traits

description: Datasets from the scientific article by Schneider, et al. (2017). Plant functional traits and diversity maps of the Laegern temperate mixed forest in Switzerland. Please cite: Schneider, F. D., Morsdorf, F., Schmid, B., Petchey, O. L., Hueni, A., Schimel, D. S., & Schaepman, M. E. (2017). Mapping functional diversity from remotely sensed morphological and physiological forest traits. <em>Nature Communications</em>, <em>8</em>(1), 1441. https://doi.org/10.1038/s41467-017-01530-3 <br> Morphological traits at 6 m spatial resolution, scaled from 0-1: CH: Canopy Height FHD: Foliage Height Diversity PAI: Plant Area Index Physiological traits at 6 m spatial resolution, scaled from 0-1: CAR: Carotenoids CHL: Chlorophylls EWT: Equivalent Water Thickness Morphological diversity at 12, 60 and 240 m scale: FDiv: Functional Divergence FEve: Functional Evenness FRic: Functional Richness Physiological diversity at 12, 60 and 240 m scale: FDiv: Functional Divergence FEve: Functional Evenness FRic: Functional Richness
DOI: 10.6084/m9.figshare.10047470.v1
title: MOESM1 of Ecological status of high altitude medicinal plants and their sustainability: Lingshi, Bhutan

description: Additional file 1. Geo-location, vegetation cover and habitat description for priority species at different survey points.
DOI: 10.6084/m9.figshare.28504355.v1
title: data Indonesia and Malaysia.xlsx

description: This study explores how system-based and cognitive-based factors affect platform trust and its role in the actual use of PayLater services (Buy Now Pay Later or BNPL) in Indonesia and Malaysia
DOI: 10.6084/m9.figshare.23750820.v1
title: Wonderlin submitted MS 2023

description: Data related to MS submitted to Ecological Entomology July 2023. MS title is: Distinct diurnal and nocturnal flower visitor communities provide pollination services in urban gardens
DOI: 10.25398/rd.northumbria.24910635.v1
title: Re-experiencing the (dis)pleasure: Uncovering the roles of controlled processes and automatic attitudes in the regulation of physical activity behaviour in children

description: Despite substantial research efforts to increase engagement in physical activity (PA), children are not sufficiently active. Dual-process theories suggest that PA behaviour regulation occurs through both controlled (reflective and conscious) and automatic (non-reflective and less conscious) processes. Controlled and automatic processes depend on affective valuations and attitudes towards PA and have been shown to predict PA behaviour. However, their role in PA behaviour regulation in children remains unclear. The current study investigated the unique association of automatic attitudes towards PA on self-reported 7-day PA, after accounting for known controlled precursors of PA (i.e., explicit attitudes, PA self-efficacy, and PA intentions). In a cross-sectional design, 73 children (10.9 ± 0.6 years) completed the Single-Category Implicit Association Task (SC-IAT) and self-reported measures of PA and controlled processes (i.e., explicit affective and instrumental attitudes, PA self-efficacy and PA intentions). In a hierarchical regression analysis, controlled processes accounted for 35.8% of the variance in PA. Although the direct association between automatic attitudes and PA was not significant (r = 0.08, p = 0.477), the association between these constructs became significant but negative in the fully adjusted model (b = -1.44; p = 0.018). The final model accounted for 39.6% of the variance in PA. In summary, the findings indicated that both controlled and automatic processes predicted PA in children, although the association with automatic attitudes was not in the expected direction in the adjusted model. Future studies are warranted to further understand the role of automatic processes in children’s PA behaviour regulation.
DOI: 10.6084/m9.figshare.5128003.v1
title: Supplementary Material for: Mortality and Longevity after a Spinal Cord Injury: Systematic Review and Meta-Analysis

description: <b><i>Background/Aims:</i></b> Mortality and longevity studies of spinal cord injury (SCI) are essential for informing healthcare systems and policies. This review evaluates the current evidence among people with SCIs worldwide in relation to the WHO region and country income level; demographic and lesion characteristics; and in comparison with the general population. <b><i>Methods:</i></b> A systematic review of relevant databases for original studies. Pooled estimates were derived using random effects meta-analysis, restricted to traumatic SCI. <b><i>Results:</i></b> Seventy-four studies were included. In-hospital mortality varied, with pooled estimates of 24.1% (95% confidence interval (CI) 14.1-38.0), 7.6% (95% CI 6.3-9.0), 7.0% (95% CI 1.5-27.4), and 2.1% (95% CI 0.9-5.0) in the WHO regions of Africa, the Americas, Europe and Western Pacific. The combined estimate for low- and middle-income countries was nearly three times higher than for high-income countries. Pooled estimates of first-year survival were 86.5% (95% CI 75.3-93.1), 95.6% (95% CI 81.0-99.1), and 94.0% (95% CI 93.3-94.6) in the Americas, Europe and Western Pacific. Pooled estimates of standardized mortality ratios in tetraplegics were 2.53 (2.00-3.21) and 2.07 (1.47-2.92) in paraplegics. <b><i>Conclusion:</i></b> This study found substantial variation in mortality and longevity within the SCI population, compared to the general population, and between WHO regions and country income level. Improved standardization and quality of reporting is needed to improve inferences regarding the extent to which mortality outcomes following an SCI are related to healthcare systems, services and policies.
DOI: 10.6084/m9.figshare.14987133.v1
title: Supplementary Material for: Diagnostic Accuracy of Trichoscopy in Inflammatory Scalp Diseases: A Systematic Review

description: <b><i>Background:</i></b> The common inflammatory scalp diseases, such as psoriasis, seborrheic dermatitis, lichen planopilaris, discoid lupus erythematosus, contact dermatitis, or pemphigus may share similar clinical features. <b><i>Objective:</i></b> To identify and systematically review the available evidence on the accuracy of trichoscopy in inflammatory scalp disorders. <b><i>Methods:</i></b> A systematic review was performed according to Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines. A total of 58 articles were included in the analysis. <b><i>Results:</i></b> The following trichoscopy features were found to show the highest specificity for the respective diseases: in psoriasis: diffuse scaling, simple and twisted red loops, red dots and globules, and glomerular vessels; in seborrheic dermatitis: atypical vessels, thin arborizing vessels, and structureless red areas; in discoid lupus erythematosus: follicular plugs and erythema encircling follicles; in lichen planopilaris: milky red areas or fibrotic patches; in contact dermatitis: twisted red loops; in pemphigus foliaceus: white polygonal structures and serpentine vessels; in pemphigus vulgaris: red dots with whitish halo and lace-like vessels; and in dermatomyositis: lake-like vascular structures. <b><i>Limitations:</i></b> Different nomenclature and variability in parameters, which were analyzed in different studies. <b><i>Conclusion:</i></b> This systemic analysis indicates that trichoscopy may be used with high accuracy in the differential diagnosis of inflammatory scalp diseases.
DOI: 10.23641/asha.24052821.v1
title: Rhythmic sequencing in CAS (Vuolo et al., 2023)

description: <b>Purpose:</b> Rhythm is one procedural mechanism that underlies language and motor skill acquisition and has been implicated in children with childhood apraxia of speech (CAS). The purpose of this study is to investigate manual rhythmic sequencing skills in children with a history of or current CAS (hx/CAS) compared to children with typical development (TD).<b>Method:</b> Thirty-eight children (18 with hx/CAS, 20 with TD), ages 5;0–12;8 (years;months), from across the United States participated in an online study. Participants imitated two rhythms in two different conditions, clapping and tapping. We assessed overall accuracy, mean number of beats, pause marking, and rhythmic sequence variability using the Mann–Whitney U test. Effect sizes were calculated to examine the influence of coordinative complexity on performance.<b>Results:</b> Compared to children with TD, children with hx/CAS marked fewer trials with a pause in both conditions of the easier rhythm and showed lower overall accuracy and more variable rhythmic sequences in both rhythms and conditions. The mean number of beats produced by children with hx/CAS and children with TD did not differ in three out of four rhythms/conditions. Unlike children with TD, children with hx/CAS showed little improvement from clapping to tapping across most dependent measures; reducing coordination demands did not improve performance in children with hx/CAS.<b>Conclusions:</b> We found that children with hx/CAS show manual rhythmic deficits that are similar to the deficits they display in speech. These findings provide support for a domain-general cognitive mechanisms account of the rhythmic deficits observed across linguistic and nonlinguistic tasks in children with hx/CAS.<b>Supplemental Material S1.</b> Available report information for hx/CAS group.Vuolo, J., Kinross, A., & DeHart, K. (2023). Manual rhythmic sequencing skills in children with childhood apraxia of speech. <i>Journal of Speech, Language, and Hearing Research, 66</i>(10), 3773–3790. https://doi.org/10.1044/2023_JSLHR-23-00141
DOI: 10.6084/m9.figshare.26805253.v1
title: American Gut Dataset

description: American Gut Dataset used in the manuscript, original source from the publication "Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in mice"(https://www.nature.com/articles/nmicrobiol2016140)<br><br>
DOI: 10.6084/m9.figshare.21758723.v3
title: Supplemental_Tables_02

description: Supplemental Tables for differentially expressed genes in female and male mice lungs 7 days post influenza infection.
DOI: 10.6084/m9.figshare.5234068.v10
title: American Rivers Dam Removal Database

description: American Rivers’ Dam Removal
Database includes all dam removals in the United States (of which we have been
made aware) in which a significant portion of the dam has been removed for the
full height of the dam, such that ecological function, natural river flow and
fish passage can be restored at the site. This database is revised and updated
annually with information provided by contributors across the country. The
database may be used by anyone provided that citation is given to American
Rivers and the DOI link is included.
DOI: 10.17608/k6.auckland.17087108.v1
title: Supplementary data 2. The gene regulatory interactions of the NAFLD-SNPs within unaffected- and diseased-LGRN

description: We identified SNPs that are strongly in linkage disequilibrium (r<sup>2 </sup>&gt;= 0.8) with the NAFLD-associated SNPs reported by GWAS. The gene regulatory interactions of the NAFLD-SNPs (GWAS + LD) were extracted from the LGRN (spatially constrained; derived from a cohort of NAFLD unaffected individuals) and an eQTL-gene network derived from liver samples from a cohort of NAFLD patients (diseased-LGRN).
DOI: 10.6084/m9.figshare.24266152.v2
title: OMC

description: The data set of 30 transtibial prosthetic wearers during gait analysis using 3D motion optical capture system. The files contains both static and walking trials.
DOI: 10.25403/upresearchdata.25225739.v1
title: Hearing aid effect study

description: The stigma associated with wearing hearing aids, known as the "hearing aid effect," remains a significant issue in hearing healthcare. Despite notable changes in the look and feel of hearing aids over the last decade, little is known about the influence of socioeconomic factors on the perception of different hearing devices in a socioeconomically diverse setting. Therefore the objective of the study is to determine the hearing aid effect across a range of hearing devices and its association with socioeconomic factors, namely area of residence and level of education across African communities.The study used a cross-sectional design with 322 participants (161 rural, 161 urban); mean age 31.9 years (14.7 SD). Participants rated photographs of seven different styles of devices [standard behind-the-ear hearing aid (BTE HA) with an earmould, mini BTE HA with a slim tube (ST), in-the-canal (ITC) HA, Airpod, receiver-in-canal (RIC), completely-in-canal (CIC) HA, and Personal Sound Amplification Product (PSAP)] worn by a peer model using a validated scale of eight attributes (attractiveness , age, success, hardworking, trustworthiness, intelligence, friendliness, education). 
<br>
The ratings of the BTE HA with earmould were used as a benchmark for comparison. No hearing aid effect was observed across all participants (n = 322) with device ratings ranging between neutral and positive. Significant differences between device ratings were evident for attractiveness for ST and PSAP and trustworthiness for ITC. In terms of residence, urban participants provided more favorable ratings compared to rural participants, with significant differences across three attribute ratings: hardworking for ST; attractiveness, hardworking for ITC; age for RIC and Airpod and hardworking for PSAP. For level of education, significant differences were found for attributes of attractiveness (H = 13.5; p = 0.001) for ITC; attractiveness (H = 14.7, p = 0.001) for PSAP; age (H = 9.5; p = 0.009) for RIC; age (H = 14.3; p &lt; 0.001) and intelligence (H = 15.1; p &lt; 0.001) for Airpod and; hardworking (H = 11.9, p = 0.003) for ST. Overall, participants had a neutral to positive view of hearing devices with preferences for less visible, conventionally styled devices. Socioeconomic variables such as educational attainment and geographical location influence perceptions of hearing devices emphasizing the importance of taking these aspects into account when prescribing hearing devices.