cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6075749
title: Diversity-oriented regioselective domino Michael/Aldol reaction of 3-ylideneoxindoles: A direct access to indanol-fused 3-oxindoles

description: A diversity-oriented molecular hybridization strategy has been utilized for the synthesis of 2,3-disubstituted 1-indanol-fused 3-oxindoles through a regioselective domino Michael/Aldol reaction of 3-ylideneoxindoles <b>1</b> with malononitrile or cyanacetate ethyle <b>2</b>. Products bearing consecutive stereocenters consist of an oxindole moiety and an indanol core, were smoothly obtained in high yields (up to 92% yield) with good diastereoselectivity (up to 20:1). This protocol also represents the first construction of indanol-fused 3-oxindole scaffolds, thus leading to new knowledge in the fields of both molecular complexity and diversity-oriented synthesis (DOS) and the lead compound discovery. It is also worth mentioning that the reaction was completely regioselective and the competitive regioisomeric products <b>4</b> or <b>5</b> were not obtained in any case.
DOI: 10.6084/m9.figshare.6075749.v1
title: Diversity-oriented regioselective domino Michael/Aldol reaction of 3-ylideneoxindoles: A direct access to indanol-fused 3-oxindoles

description: A diversity-oriented molecular hybridization strategy has been utilized for the synthesis of 2,3-disubstituted 1-indanol-fused 3-oxindoles through a regioselective domino Michael/Aldol reaction of 3-ylideneoxindoles <b>1</b> with malononitrile or cyanacetate ethyle <b>2</b>. Products bearing consecutive stereocenters consist of an oxindole moiety and an indanol core, were smoothly obtained in high yields (up to 92% yield) with good diastereoselectivity (up to 20:1). This protocol also represents the first construction of indanol-fused 3-oxindole scaffolds, thus leading to new knowledge in the fields of both molecular complexity and diversity-oriented synthesis (DOS) and the lead compound discovery. It is also worth mentioning that the reaction was completely regioselective and the competitive regioisomeric products <b>4</b> or <b>5</b> were not obtained in any case.
DOI: 10.6084/m9.figshare.6077213
title: Additional file 2: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: Prediction of target genes of lncRNAs. (XLSX 88 kb)
DOI: 10.6084/m9.figshare.6077213.v1
title: Additional file 2: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: Prediction of target genes of lncRNAs. (XLSX 88 kb)
DOI: 10.6084/m9.figshare.6077225
title: Additional file 3: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: KEGG terms of predicted target genes. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.6077225.v1
title: Additional file 3: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: KEGG terms of predicted target genes. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.6077240
title: Additional file 4: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: GO terms of predicted target genes. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.6077240.v1
title: Additional file 4: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: GO terms of predicted target genes. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.6077261
title: Additional file 5: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: KEGG terms of mRNAs. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.6077261.v1
title: Additional file 5: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: KEGG terms of mRNAs. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.6077282
title: Additional file 6: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: GO terms of mRNAs. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.6077282.v1
title: Additional file 6: of RNA-seq analysis of lncRNA-controlled developmental gene expression during puberty in goat & rat

description: GO terms of mRNAs. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.6077417
title: Additional file 1: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

description: Table S1. Information of markers located in the high-resolution genetic linkage map of the Yangtze River common carp (Cyprinus carpio haematopterus), and their aligned positions in genomes of C. c. carpio, Danio rerio and Ctenopharyngodon idellus. (XLSX 696Â kb)
DOI: 10.6084/m9.figshare.6077417.v1
title: Additional file 1: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

description: Table S1. Information of markers located in the high-resolution genetic linkage map of the Yangtze River common carp (Cyprinus carpio haematopterus), and their aligned positions in genomes of C. c. carpio, Danio rerio and Ctenopharyngodon idellus. (XLSX 696Â kb)
DOI: 10.6084/m9.figshare.6077483
title: Additional file 5: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

description: Table S2. The markers within confidence intervals of QTLs for growth traits in the Yangtze River common carp (Cyprinus carpio haematopterus), and their aligned positions in genomes of C. c. carpio, Danio rerio and Ctenopharyngodon idellus. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.6077483.v1
title: Additional file 5: of A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

description: Table S2. The markers within confidence intervals of QTLs for growth traits in the Yangtze River common carp (Cyprinus carpio haematopterus), and their aligned positions in genomes of C. c. carpio, Danio rerio and Ctenopharyngodon idellus. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.6077627
title: Additional file 10: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Gene expression analysis of transgenic mouse models. Using previously published gene expression data from breast tumors of transgenic mouse models [17], we found genes with significantly different expression in each transgenic model compared to all other transgenic models used in our study. For a complete analysis using multiple other transgenic mouse model gene expression as backgrounds (including the ones we used), please refer to the supplementary files of the cited research article. (ZIP 463Â kb)
DOI: 10.6084/m9.figshare.6077627.v1
title: Additional file 10: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Gene expression analysis of transgenic mouse models. Using previously published gene expression data from breast tumors of transgenic mouse models [17], we found genes with significantly different expression in each transgenic model compared to all other transgenic models used in our study. For a complete analysis using multiple other transgenic mouse model gene expression as backgrounds (including the ones we used), please refer to the supplementary files of the cited research article. (ZIP 463Â kb)
DOI: 10.6084/m9.figshare.6077642
title: Additional file 1: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Raw data for GC/LC-MS/MS metabolomics. Related to Figs.Â 1 and 2. This table contains all the GC/LC-MS/MS metabolomics data. Included under separate tabs are raw data, statistical analysis, pathway analysis, heat maps, and box plots. (XLSX 2322Â kb)
DOI: 10.6084/m9.figshare.6077642.v1
title: Additional file 1: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Raw data for GC/LC-MS/MS metabolomics. Related to Figs.Â 1 and 2. This table contains all the GC/LC-MS/MS metabolomics data. Included under separate tabs are raw data, statistical analysis, pathway analysis, heat maps, and box plots. (XLSX 2322Â kb)
DOI: 10.6084/m9.figshare.6077660
title: Additional file 2: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Mouse models used in the study. Related to Fig.Â 1. This table includes the mouse models and the number of mice in each group, including mouse genotype, age, and weight of sample sent. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.6077660.v1
title: Additional file 2: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Mouse models used in the study. Related to Fig.Â 1. This table includes the mouse models and the number of mice in each group, including mouse genotype, age, and weight of sample sent. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.6077693
title: MOESM10 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 10: Table S9. Differentially expressed genes involved in glycolysis and TCA cycle.
DOI: 10.6084/m9.figshare.6077693.v1
title: MOESM10 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 10: Table S9. Differentially expressed genes involved in glycolysis and TCA cycle.
DOI: 10.6084/m9.figshare.6077696
title: Additional file 5: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: List of greatly upregulated metabolites in tumors. Related to Figs. 1 and 2. Metabolites that are significantly upregulated (p &lt; 0.05, Welch’s t-test) in all 5 tumor groups compared to normal are then screened for mean values. (A) Metabolites that are two-fold upregulated in all 5 tumor groups. (B) Metabolites that are five-fold upregulated in all 5 tumor groups. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.6077696.v1
title: Additional file 5: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: List of greatly upregulated metabolites in tumors. Related to Figs. 1 and 2. Metabolites that are significantly upregulated (p &lt; 0.05, Welch’s t-test) in all 5 tumor groups compared to normal are then screened for mean values. (A) Metabolites that are two-fold upregulated in all 5 tumor groups. (B) Metabolites that are five-fold upregulated in all 5 tumor groups. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.6077705
title: MOESM11 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 11: Table S10. Differentially expressed genes involved in lignin biosynthesis.
DOI: 10.6084/m9.figshare.6077705.v1
title: MOESM11 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 11: Table S10. Differentially expressed genes involved in lignin biosynthesis.
DOI: 10.6084/m9.figshare.6077717
title: MOESM12 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 12: Table S11. Common DMGs in switchgrass and maize.
DOI: 10.6084/m9.figshare.6077717.v1
title: MOESM12 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 12: Table S11. Common DMGs in switchgrass and maize.
DOI: 10.6084/m9.figshare.6077723
title: Additional file 7: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Raw data for CZE-MS/MS and list of significantly different metabolites from epithelial cells to adipocytes. Related to Fig.Â 1. This table contains all the metabolomics information for the fat pad/epithelium experiment, including raw data, statistical analysis, and identities of the significantly different metabolites. (XLSX 694Â kb)
DOI: 10.6084/m9.figshare.6077723.v1
title: Additional file 7: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Raw data for CZE-MS/MS and list of significantly different metabolites from epithelial cells to adipocytes. Related to Fig.Â 1. This table contains all the metabolomics information for the fat pad/epithelium experiment, including raw data, statistical analysis, and identities of the significantly different metabolites. (XLSX 694Â kb)
DOI: 10.6084/m9.figshare.6077726
title: MOESM13 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 13: Table S12. List of DMGs that are different between switchgrass and maize.
DOI: 10.6084/m9.figshare.6077726.v1
title: MOESM13 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 13: Table S12. List of DMGs that are different between switchgrass and maize.
DOI: 10.6084/m9.figshare.6077732
title: Additional file 8: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: List of model specific metabolites. Related to Fig.Â 2. Model specific metabolites were determined by non-parametric t-test comparing one mouse model to all other groups. The metabolites listed have a p-value smaller than 0.05. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.6077732.v1
title: Additional file 8: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: List of model specific metabolites. Related to Fig.Â 2. Model specific metabolites were determined by non-parametric t-test comparing one mouse model to all other groups. The metabolites listed have a p-value smaller than 0.05. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.6077741
title: Additional file 9: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Raw Data for Patient Survival Prediction Using Model Specific Metabolites. Related to TableÂ 1. Using a Cox proportional hazards model, different metabolites and sets of metabolites were used as input to predict patient survival in a previously published human breast cancer patient metabolomics dataset. The p-values for each individual metabolite as well as a combination of the metabolites are listed. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.6077741.v1
title: Additional file 9: of Metabolomics of oncogene-specific metabolic reprogramming during breast cancer

description: Raw Data for Patient Survival Prediction Using Model Specific Metabolites. Related to TableÂ 1. Using a Cox proportional hazards model, different metabolites and sets of metabolites were used as input to predict patient survival in a previously published human breast cancer patient metabolomics dataset. The p-values for each individual metabolite as well as a combination of the metabolites are listed. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.6077744
title: MOESM2 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 2: Table S1. List of dehydration memory genes (DMGs) identified in this work.
DOI: 10.6084/m9.figshare.6077744.v1
title: MOESM2 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 2: Table S1. List of dehydration memory genes (DMGs) identified in this work.
DOI: 10.6084/m9.figshare.6077750
title: MOESM3 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 3: Table: S2. Primers used in qRT-PCR.
DOI: 10.6084/m9.figshare.6077750.v1
title: MOESM3 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 3: Table: S2. Primers used in qRT-PCR.
DOI: 10.6084/m9.figshare.6077753
title: MOESM4 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 4: Table S3. Top 20 pathways involved in dehydration memory.
DOI: 10.6084/m9.figshare.6077753.v1
title: MOESM4 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 4: Table S3. Top 20 pathways involved in dehydration memory.
DOI: 10.6084/m9.figshare.6077756
title: MOESM5 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 5: Table S4. Differentially expressed genes involved in ABA biosynthesis, degradation and signal transduction.
DOI: 10.6084/m9.figshare.6077756.v1
title: MOESM5 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 5: Table S4. Differentially expressed genes involved in ABA biosynthesis, degradation and signal transduction.
DOI: 10.6084/m9.figshare.6077759
title: MOESM6 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 6: Table S5. Differentially expressed genes involved in JA biosynthesis and signal transduction.
DOI: 10.6084/m9.figshare.6077759.v1
title: MOESM6 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 6: Table S5. Differentially expressed genes involved in JA biosynthesis and signal transduction.
DOI: 10.6084/m9.figshare.6077762
title: MOESM7 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 7: Table S6. Differentially expressed genes involved in other plant hormones biosynthesis and signal transduction.
DOI: 10.6084/m9.figshare.6077762.v1
title: MOESM7 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 7: Table S6. Differentially expressed genes involved in other plant hormones biosynthesis and signal transduction.
DOI: 10.6084/m9.figshare.6077765
title: MOESM8 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 8: Table S7. Differentially expressed genes involved in the biosynthesis of L-proline, stachyose and trehalose.
DOI: 10.6084/m9.figshare.6077765.v1
title: MOESM8 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 8: Table S7. Differentially expressed genes involved in the biosynthesis of L-proline, stachyose and trehalose.
DOI: 10.6084/m9.figshare.6077768
title: MOESM9 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 9: Table S8. Differentially expressed genes involved in photosynthesis.
DOI: 10.6084/m9.figshare.6077768.v1
title: MOESM9 of Transcriptional and physiological data reveal the dehydration memory behavior in switchgrass (Panicum virgatum L.)

description: Additional file 9: Table S8. Differentially expressed genes involved in photosynthesis.
DOI: 10.6084/m9.figshare.6083864
title: Crystallographic data in CIF from Investigation on the hydrolytic mechanism of cucurbit[6]uril in alkaline solution.

description: Single Crystal Structure in CIF of 3 hydrolysis products.
DOI: 10.6084/m9.figshare.6083864.v2
title: Crystallographic data in CIF from Investigation on the hydrolytic mechanism of cucurbit[6]uril in alkaline solution.

description: Single Crystal Structure in CIF of 3 hydrolysis products.
DOI: 10.6084/m9.figshare.6083864.v1
title: Crystallographic data in CIF from Investigation on the hydrolytic mechanism of cucurbit[6]uril in alkaline solution

description: Single Crystal Structure in CIF of 3 hydrolysis products.
DOI: 10.6084/m9.figshare.6084254
title: Additional file 2: of Gut-dependent microbial translocation induces inflammation and cardiovascular events after ST-elevation myocardial infarction

description: Table S2. Data production of 198 samples in three groups (control, CHD, STEMI). Table S3. Relative abundance profile at the phylum level. Table S4. Detailed information of differential genera (adjust P value â ¤â 0.05). (XLSX 153Â kb)
DOI: 10.6084/m9.figshare.6084254.v1
title: Additional file 2: of Gut-dependent microbial translocation induces inflammation and cardiovascular events after ST-elevation myocardial infarction

description: Table S2. Data production of 198 samples in three groups (control, CHD, STEMI). Table S3. Relative abundance profile at the phylum level. Table S4. Detailed information of differential genera (adjust P value â ¤â 0.05). (XLSX 153Â kb)
DOI: 10.6084/m9.figshare.6084332
title: MOESM2 of Simulation models predict that school-age children are responsible for most human-to-mosquito Plasmodium falciparum transmission in southern Malawi

description: Additional file 2. Summary of age-specific infectiousness data from membrane- and skin-feeding studies. Table providing abstracted data from a literature review of membrane- and skin-feeding studies, especially those that provided data on differential infectivity by age and any calculations of human contributions to the infectious or transmission reservoirs.
DOI: 10.6084/m9.figshare.6084332.v1
title: MOESM2 of Simulation models predict that school-age children are responsible for most human-to-mosquito Plasmodium falciparum transmission in southern Malawi

description: Additional file 2. Summary of age-specific infectiousness data from membrane- and skin-feeding studies. Table providing abstracted data from a literature review of membrane- and skin-feeding studies, especially those that provided data on differential infectivity by age and any calculations of human contributions to the infectious or transmission reservoirs.
DOI: 10.6084/m9.figshare.6084347
title: MOESM3 of Simulation models predict that school-age children are responsible for most human-to-mosquito Plasmodium falciparum transmission in southern Malawi

description: Additional file 3. Tool for site-specific model calculations. A spreadsheet that enables researchers and policy-makers to input data from their site into the model and estimate transmission contributions by age. Caution is recommended for the interpretation of this output in settings with malaria epidemiology that is very different than that of southern Malawi.
DOI: 10.6084/m9.figshare.6084347.v1
title: MOESM3 of Simulation models predict that school-age children are responsible for most human-to-mosquito Plasmodium falciparum transmission in southern Malawi

description: Additional file 3. Tool for site-specific model calculations. A spreadsheet that enables researchers and policy-makers to input data from their site into the model and estimate transmission contributions by age. Caution is recommended for the interpretation of this output in settings with malaria epidemiology that is very different than that of southern Malawi.
DOI: 10.6084/m9.figshare.6084362
title: MOESM4 of Simulation models predict that school-age children are responsible for most human-to-mosquito Plasmodium falciparum transmission in southern Malawi

description: Additional file 4. Dry season model equations. Files for use with Berkeley Madonna modelling software that include model equations and dry season parameter estimates from this paper.