cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34944/dspace/7231
title: Peer Support IDD Scoping Review Search

description: To identify studies to include or consider for this systematic review, the review team worked with a medical librarian to develop detailed search strategies for each database. The search was developed for PubMed (NLM) and was translated to ERIC (EbscoHost), PsycInfo (EbscoHost) and Web of Science (Clarivate Analytics) using a combination of keywords and subject headings. A grey literature search included NIRS, AAIDD, PaTTAN/PA, Think College UMASS, ILRU, Pacer.org and the PCORI websites. The search excluded child studies and was limited by date from 2005 to Present. The final search was completed on November 24, 2021. The full search details are provided in Appendix(___). PubMed (NLM) from 01/01/2005 to 11/24/2021 (858 Results) ERIC (EbscoHost) from 01/01/2005 to 11/24/2021 (288 Results) PsycInfo (EbscoHost) from 01/01/2005 to 11/24/2021 (279 Results) Web of Science (Clarivate Analytics) from 01/01/2005 to 11/24/2021 (341 Results) The search resulted in 1,986 studies (210 from grey literature sources). 279 duplicate studies were found and omitted using Endnote 20 for the deduplication of records and 1,707 references were eligible to screen. Studies were screened by title and abstract by two blinded and independent reviewers. If a tiebreaker was needed, a third reviewer was called in. This process was repeated for full text article screening and article selection.
description: To identify studies to include or consider for this systematic review, the review team worked with a medical librarian to develop detailed search strategies for each database. The search resulted in 1,986 studies (210 from grey literature sources). 279 duplicate studies were found and omitted using Endnote 20 for the deduplication of records and 1,707 references were eligible to screen. Studies were screened by title and abstract by two blinded and independent reviewers. If a tiebreaker was needed, a third reviewer was called in. This process was repeated for full text article screening and article selection.
DOI: 10.34944/dspace/7232
title: Search Strategies for Systematic Review of Ear Disease & Ear Abnormalities

description: To identify studies to include or consider for this systematic review, the review team worked with a medical librarian to develop detailed search strategies for each database. The search was developed for PubMed (NLM) and was translated to Embase (Elsevier), Web of Science (Clarivate Analytics), CINAHL (EbscoHost), and Cochrane Central (Wiley) using a combination of keywords and subject headings. A grey literature search included ClinicalTrials.gov and the TRIP database. The search was limited to 1990 to current literature. [Authors will provide justification for date limitations]. The final search was completed on November 23, 2021. The full search details are provided in Appendix(___). PubMed (NLM) from 01/01/1990 to 11/23/2021 (3,240 Results) Embase (Elsevier) from 01/01/1990 to 11/23/2021 (10,526 Results) Web of Science (Clarivate Analytics) from 01/01/1990 to 11/23/2021 (31 Results) CINAHL (EbscoHost) from 01/01/1990 to 11/23/2021 (1,108 Results) Cochrane Central (Wiley) from 01/01/1990 to 11/23/2021 (2 Results) The search resulted in 15,188 studies (281 from grey literature sources). 2,165 duplicate studies were found and omitted using Endnote 20 for the deduplication of records and 13,023 references were eligible to screen. Studies were screened by title and abstract by two blinded and independent reviewers. If a tiebreaker was needed, a third reviewer was called in. This process was repeated for full text article screening and article selection.
description: To identify studies to include or consider for this systematic review, the review team worked with a medical librarian to develop detailed search strategies for each database. The search resulted in 15,188 studies (281 from grey literature sources). 2,165 duplicate studies were found and omitted using Endnote 20 for the deduplication of records and 13,023 references were eligible to screen. Studies were screened by title and abstract by two blinded and independent reviewers. If a tiebreaker was needed, a third reviewer was called in. This process was repeated for full text article screening and article selection.
DOI: 10.6084/m9.figshare.18864679
title: Additional file 10 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 10: Table S10. DEG associated with plant carotenoid biosynthesis in Yu17S seedlings in response to cold stress.
DOI: 10.6084/m9.figshare.18864679.v1
title: Additional file 10 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 10: Table S10. DEG associated with plant carotenoid biosynthesis in Yu17S seedlings in response to cold stress.
DOI: 10.6084/m9.figshare.18864682
title: Additional file 11 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 11: Table S11. DEGs associated with phytohormone metabolism in Yu17S seedlings in response to cold stress.
DOI: 10.6084/m9.figshare.18864682.v1
title: Additional file 11 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 11: Table S11. DEGs associated with phytohormone metabolism in Yu17S seedlings in response to cold stress.
DOI: 10.6084/m9.figshare.18864685
title: Additional file 12 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 12: Table S12. DEG associated with osmotic adjustment in Yu17S seedlings in response to cold stress.
DOI: 10.6084/m9.figshare.18864685.v1
title: Additional file 12 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 12: Table S12. DEG associated with osmotic adjustment in Yu17S seedlings in response to cold stress.
DOI: 10.6084/m9.figshare.18864691
title: Additional file 2 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 2: Table S2. Primers and corresponding sequences used for quantitative RT-PCR analysis.
DOI: 10.6084/m9.figshare.18864691.v1
title: Additional file 2 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 2: Table S2. Primers and corresponding sequences used for quantitative RT-PCR analysis.
DOI: 10.6084/m9.figshare.18864694
title: Additional file 3 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 3: Table S3. Significantly-regulated DEGs at all the time points of chilling stress
DOI: 10.6084/m9.figshare.18864694.v1
title: Additional file 3 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 3: Table S3. Significantly-regulated DEGs at all the time points of chilling stress
DOI: 10.6084/m9.figshare.18864697
title: Additional file 4 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 4: Table S4. DEGs associated with transcription factor families in rice at all five time points.
DOI: 10.6084/m9.figshare.18864697.v1
title: Additional file 4 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 4: Table S4. DEGs associated with transcription factor families in rice at all five time points.
DOI: 10.6084/m9.figshare.18864700
title: Additional file 5 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 5: Table S5. GO analysis of the 9317 DEGs under cold (2–48 h) conditions and 24 h recovery stages in Yu17S seedlings. (XLS 127 kb)
DOI: 10.6084/m9.figshare.18864700.v1
title: Additional file 5 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 5: Table S5. GO analysis of the 9317 DEGs under cold (2–48 h) conditions and 24 h recovery stages in Yu17S seedlings. (XLS 127 kb)
DOI: 10.6084/m9.figshare.18864706
title: Additional file 6 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 6: Table S6. GO analysis of all the upregulated DEGs under cold (2–48 h) conditions in Yu17S seedlings.
DOI: 10.6084/m9.figshare.18864706.v1
title: Additional file 6 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 6: Table S6. GO analysis of all the upregulated DEGs under cold (2–48 h) conditions in Yu17S seedlings.
DOI: 10.6084/m9.figshare.18864709.v1
title: Additional file 7 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 7: Table S7. GO analysis of all the upregulated and downregulated DEGs under 24 h recovery stages in Yu17S seedlings.
DOI: 10.6084/m9.figshare.18864709
title: Additional file 7 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 7: Table S7. GO analysis of all the upregulated and downregulated DEGs under 24 h recovery stages in Yu17S seedlings.
DOI: 10.6084/m9.figshare.18864712
title: Additional file 8 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 8: Table S8. KEGG Pathway analysis of the 9317 DEGs under cold (2–48 h) conditions and 24 h recovery stages in Yu17S seedlings.
DOI: 10.6084/m9.figshare.18864712.v1
title: Additional file 8 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 8: Table S8. KEGG Pathway analysis of the 9317 DEGs under cold (2–48 h) conditions and 24 h recovery stages in Yu17S seedlings.
DOI: 10.6084/m9.figshare.18864715
title: Additional file 9 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 9: Table S9. DEG associated with plant photosynthesis process in Yu17S seedlings in response to cold stress.
DOI: 10.6084/m9.figshare.18864715.v1
title: Additional file 9 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

description: Additional file 9: Table S9. DEG associated with plant photosynthesis process in Yu17S seedlings in response to cold stress.
DOI: 10.6084/m9.figshare.18864764
title: Additional file 3 of Genomic diversity and signatures of selection in meat and fancy rabbit breeds based on high-density marker data

description: Additional file 3: Table S7. List of outlier markers identified using PCAdapt. Table S11. Comparative single-breed FST analysis (M1 = Method 1). The genome windows at the extreme lower end of the distributions (99.0th percentile) are presented. Table S12. Comparative single-breed FST analysis (M2 = Method 2). The genome windows at the extreme lower end of the distributions (99.0th percentile) are presented. Table S13. Genome regions identified in the single-breed FST analyses (99.8th percentile). Table S15. List of the markers at the extreme lower end of the distributions (99.95th percentile) identified with the FST single-marker-based analysis for the single-breed approach using Method 1 (M1). SNPs are reported in decreasing order of FST value. Table S16. List of the markers at the extreme lower end of the distributions (99.95th percentile) identified with the FST single-marker-based analysis for the single-breed approach using Method 2 (M2). SNPs are reported in decreasing order of FST value. Table S19. Comparative FST analysis for groups of breeds as defined in Additional file 1: Table S2. The genome windows at the extreme lower end of the distributions (99.0th percentile) are presented. Table S21. List of the markers at the extreme lower end of the distributions (99.95th percentile) identified with the FST single-marker-based analysis using the approach that includes groups of breeds. SNPs are reported in decreasing order of FST value. SNPs are reported in decreasing order of FST value. Table S22. Genotype information for SNPs within the KIT gene region. Table S23. Observed heterozygosity of SNPs within the KIT gene region. Table S24. Genotype information for SNPs within the HMGA2 gene region. Table S25. Observed heterozygosity of SNPs within the HMGA2 gene region.
DOI: 10.6084/m9.figshare.18864764.v1
title: Additional file 3 of Genomic diversity and signatures of selection in meat and fancy rabbit breeds based on high-density marker data

description: Additional file 3: Table S7. List of outlier markers identified using PCAdapt. Table S11. Comparative single-breed FST analysis (M1 = Method 1). The genome windows at the extreme lower end of the distributions (99.0th percentile) are presented. Table S12. Comparative single-breed FST analysis (M2 = Method 2). The genome windows at the extreme lower end of the distributions (99.0th percentile) are presented. Table S13. Genome regions identified in the single-breed FST analyses (99.8th percentile). Table S15. List of the markers at the extreme lower end of the distributions (99.95th percentile) identified with the FST single-marker-based analysis for the single-breed approach using Method 1 (M1). SNPs are reported in decreasing order of FST value. Table S16. List of the markers at the extreme lower end of the distributions (99.95th percentile) identified with the FST single-marker-based analysis for the single-breed approach using Method 2 (M2). SNPs are reported in decreasing order of FST value. Table S19. Comparative FST analysis for groups of breeds as defined in Additional file 1: Table S2. The genome windows at the extreme lower end of the distributions (99.0th percentile) are presented. Table S21. List of the markers at the extreme lower end of the distributions (99.95th percentile) identified with the FST single-marker-based analysis using the approach that includes groups of breeds. SNPs are reported in decreasing order of FST value. SNPs are reported in decreasing order of FST value. Table S22. Genotype information for SNPs within the KIT gene region. Table S23. Observed heterozygosity of SNPs within the KIT gene region. Table S24. Genotype information for SNPs within the HMGA2 gene region. Table S25. Observed heterozygosity of SNPs within the HMGA2 gene region.
DOI: 10.6084/m9.figshare.18864797
title: Additional file 2 of Neural transcriptomic signature of chronic wasting disease in white-tailed deer

description: Additional file 2. Differentially expressed gene lists.
DOI: 10.6084/m9.figshare.18864797.v1
title: Additional file 2 of Neural transcriptomic signature of chronic wasting disease in white-tailed deer

description: Additional file 2. Differentially expressed gene lists.
DOI: 10.6084/m9.figshare.18864926
title: Additional file 2 of Genome-scale analysis of genetic regulatory elements in Streptomyces avermitilis MA-4680 using transcript boundary information

description: Additional file 2: Table S1. List of transcription start sites (TSSs) identified in this study.
DOI: 10.6084/m9.figshare.18864929
title: Additional file 3 of Genome-scale analysis of genetic regulatory elements in Streptomyces avermitilis MA-4680 using transcript boundary information

description: Additional file 3: Table S2. Transcription levels of genes determined by RNA-Seq.
DOI: 10.6084/m9.figshare.18864932
title: Additional file 4 of Genome-scale analysis of genetic regulatory elements in Streptomyces avermitilis MA-4680 using transcript boundary information

description: Additional file 4: Table S3. List of transcript 3′-end positions (TEPs) identified in this study.
DOI: 10.6084/m9.figshare.18864932.v1
title: Additional file 4 of Genome-scale analysis of genetic regulatory elements in Streptomyces avermitilis MA-4680 using transcript boundary information

description: Additional file 4: Table S3. List of transcript 3′-end positions (TEPs) identified in this study.
DOI: 10.6084/m9.figshare.18864935
title: Additional file 5 of Genome-scale analysis of genetic regulatory elements in Streptomyces avermitilis MA-4680 using transcript boundary information

description: Additional file 5: Table S4. List of transcription units (TUs) identified in this study.
DOI: 10.6084/m9.figshare.18864929.v1
title: Additional file 3 of Genome-scale analysis of genetic regulatory elements in Streptomyces avermitilis MA-4680 using transcript boundary information

description: Additional file 3: Table S2. Transcription levels of genes determined by RNA-Seq.
DOI: 10.6084/m9.figshare.18864935.v1
title: Additional file 5 of Genome-scale analysis of genetic regulatory elements in Streptomyces avermitilis MA-4680 using transcript boundary information

description: Additional file 5: Table S4. List of transcription units (TUs) identified in this study.
DOI: 10.6084/m9.figshare.18865015
title: Additional file 2 of Novel FLT3/AURK multikinase inhibitor is efficacious against sorafenib-refractory and sorafenib-resistant hepatocellular carcinoma

description: Additional file 2: Table S1. List of differentially expressed genes by DBPR114-treated Huh7 tumors. Tumor tissue RNA was isolated and subjected to RNA sequencing analysis using human-specific genome read data. The significantly upregulated and downregulated genes between the treatment and vehicle control groups were selected if they had an FDR &lt; 0.05 and absolute fold change ≥ 2. n = 4 per group for vehicle control, and n = 3 per group for DBPR114. Table S2. List of down-regulated genes associated with (A) E2F targets gene set, (B) G2/M checkpoint gene set, (C) mitotic spindle gene set, and (D) MTORC complex 1 signaling gene set by DBPR114-treated Huh7 tumors. The Huh7 tumors from the vehicle control and treated groups were harvested at the end of studies (Figure 4). The tumor RNA was isolated and analyzed for human gene expressions through mRNA sequencing. Gene set enrichment analysis was performed on Huh7 xenograft tumors (FDR &lt; 0.05).
DOI: 10.6084/m9.figshare.18865015.v1
title: Additional file 2 of Novel FLT3/AURK multikinase inhibitor is efficacious against sorafenib-refractory and sorafenib-resistant hepatocellular carcinoma

description: Additional file 2: Table S1. List of differentially expressed genes by DBPR114-treated Huh7 tumors. Tumor tissue RNA was isolated and subjected to RNA sequencing analysis using human-specific genome read data. The significantly upregulated and downregulated genes between the treatment and vehicle control groups were selected if they had an FDR &lt; 0.05 and absolute fold change ≥ 2. n = 4 per group for vehicle control, and n = 3 per group for DBPR114. Table S2. List of down-regulated genes associated with (A) E2F targets gene set, (B) G2/M checkpoint gene set, (C) mitotic spindle gene set, and (D) MTORC complex 1 signaling gene set by DBPR114-treated Huh7 tumors. The Huh7 tumors from the vehicle control and treated groups were harvested at the end of studies (Figure 4). The tumor RNA was isolated and analyzed for human gene expressions through mRNA sequencing. Gene set enrichment analysis was performed on Huh7 xenograft tumors (FDR &lt; 0.05).
DOI: 10.6084/m9.figshare.18865022
title: Additional file 1 of Leptin promoter methylation in female patients with painful multisomatoform disorder and chronic widespread pain

description: Additional file 1: Table S1. Leptin primer list.
DOI: 10.6084/m9.figshare.18865022.v1
title: Additional file 1 of Leptin promoter methylation in female patients with painful multisomatoform disorder and chronic widespread pain

description: Additional file 1: Table S1. Leptin primer list.
DOI: 10.6084/m9.figshare.18865036.v1
title: Additional file 2 of Genome insights into the pharmaceutical and plant growth promoting features of the novel species Nocardia alni sp. nov

description: Additional file 2: Table S3. Pairwise ortholog matrix between the genome sequences of isolate ncl2T (1) and N. vaccinii NBRC 15922T (2), N. casuarinae BMG51109T (3), N. jiangxiensis NBRC 101359T (4), N. miyunensis NBRC 108239T (5) and N. pseudobrasiliensis DSM 44290 T (6).
DOI: 10.6084/m9.figshare.18865036
title: Additional file 2 of Genome insights into the pharmaceutical and plant growth promoting features of the novel species Nocardia alni sp. nov

description: Additional file 2: Table S3. Pairwise ortholog matrix between the genome sequences of isolate ncl2T (1) and N. vaccinii NBRC 15922T (2), N. casuarinae BMG51109T (3), N. jiangxiensis NBRC 101359T (4), N. miyunensis NBRC 108239T (5) and N. pseudobrasiliensis DSM 44290 T (6).
DOI: 10.6084/m9.figshare.18865063
title: Additional file 1 of Ethnobotanical study on wild edible plants used by Dulong people in northwestern Yunnan, China

description: Additional file 1. Appendix A: Table 1 CFSI data. Appendix B: Table 2 One-way ANOVA data.
DOI: 10.6084/m9.figshare.18865063.v1
title: Additional file 1 of Ethnobotanical study on wild edible plants used by Dulong people in northwestern Yunnan, China

description: Additional file 1. Appendix A: Table 1 CFSI data. Appendix B: Table 2 One-way ANOVA data.
DOI: 10.6084/m9.figshare.18865055.v1
title: Additional file 3 of Immune profiles and DNA methylation alterations related with non-muscle-invasive bladder cancer outcomes

description: Additional file 3: The 27,575 CpGs associated with the hazard of 10-year RFS when the model without adjusting for immune cell profiles. The list of the 27,575 CpGs which were associated with the hazard of 10-year RFS from the EWAS with Cox model without adjusting for immune cell profiles.
DOI: 10.6084/m9.figshare.18865058.v1
title: Additional file 4 of Immune profiles and DNA methylation alterations related with non-muscle-invasive bladder cancer outcomes

description: Additional file 4: The 1,572 CpGs associated with the increased hazard of 10-year RFS. The list of the 1,572 CpGs which were associated with the increased hazard of 10-year RFS from the EWAS with Cox model adjusting for immune cell profiles.
DOI: 10.6084/m9.figshare.18865055
title: Additional file 3 of Immune profiles and DNA methylation alterations related with non-muscle-invasive bladder cancer outcomes

description: Additional file 3: The 27,575 CpGs associated with the hazard of 10-year RFS when the model without adjusting for immune cell profiles. The list of the 27,575 CpGs which were associated with the hazard of 10-year RFS from the EWAS with Cox model without adjusting for immune cell profiles.
DOI: 10.6084/m9.figshare.18865061.v1
title: Additional file 5 of Immune profiles and DNA methylation alterations related with non-muscle-invasive bladder cancer outcomes

description: Additional file 5: The 956 CpGs associated with the decreased hazard of 10-year RFS. The list of the 956 CpGs which were associated with the decreased hazard of 10-year RFS from the EWAS with Cox model adjusting for immune cell profiles.
DOI: 10.6084/m9.figshare.18865064
title: Additional file 6 of Immune profiles and DNA methylation alterations related with non-muscle-invasive bladder cancer outcomes

description: Additional file 6: The results of differentially methylated regions. no.cpgs: Number of CpG sites constituting the significant region.