cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24759837
title: testset_surrogate_model

description: Test set, surrogate model
DOI: 10.6084/m9.figshare.24759837.v1
title: testset_surrogate_model

description: Test set, surrogate model
DOI: 10.6084/m9.figshare.24759846
title: Training set surrogate model

description: training set for surrogate model
DOI: 10.6084/m9.figshare.24759846.v1
title: Training set surrogate model

description: training set for surrogate model
DOI: 10.6084/m9.figshare.24759798
title: ACS management in chronic kidney disease in Germany 2016

description: AbstractBackground:Managing acute myocardial infarction (AMI) in patients with chronic kidney disease (CKD) or end-stage renal disease on dialysis (renal replacement therapy, RRT) presents challenges due to elevated complication risks. Concerns about contrast-related kidney damage may lead to the omission of guideline-directed therapies like percutaneous coronary intervention (PCI) or coronary artery bypass grafting (CABG) in this population.Methods:We analyzed German-DRG data of 2016 provided by the German Federal Bureau of Statistics (DESTATIS). We included cases with a primary diagnosis of AMI (ST-Elevation Myocardial Infarction (STEMI) or Non-ST-Elevation Myocardial Infarction (NSTEMI) ICD-10: I21 or I22) with and without CKD or RRT. We calculated crude- and age-standardized hospitalization rates (ASR, per 100,000 person years). Furthermore, we calculated log-binominal regression models adjusting for sex, CKD, RRT, comorbidities, and place of residence to estimate adjusted relative-risks (aRR) for receiving treatments of interest in AMI, such as PCI or CABG.Results:We identified 69,728 STEMI-cases and 147,786 NSTEMI-cases. STEMI-cases without CKD had percutaneous coronary intervention (PCI) in 80.1%. In contrast, STEMI-cases with CKD or RRT had PCI in 69.7% and 71.2%, respectively. The ASR for STEMI-cases amounted to 62.3 (95%CI 61.8-62.8) per 100,000 person years, whereas the ASR for NSTEMI-cases was 122.4 (95%CI 121.7-123.0) per 100,000 person years. In regression analysis AMI-cases with CKD were less likely treated with PCI (aRR: 0.89 (95%CI 0.88-0.90)), compared to cases without CKD. AMI-Cases with RRT showed no difference in PCI rates (aRR: 1.0 (95%CI 0.97-1.03)) but were more frequently treated with CABG (aRR: 2.20 (95%CI 2.03-2.39)). Conversely, CKD was negatively associated with CABG (aRR: 0.71, 95%CI 0.67-0.75) when non-CKD cases were used as the reference group.Conclusion:We show that AMI-cases with CKD underwent PCI less frequently, while RRT has no discernible impact on PCI utilization in AMI. Furthermore, AMI-cases with RRT exhibited a higher CABG rate.
DOI: 10.6084/m9.figshare.24759798.v1
title: ACS management in chronic kidney disease in Germany 2016

description: AbstractBackground:Managing acute myocardial infarction (AMI) in patients with chronic kidney disease (CKD) or end-stage renal disease on dialysis (renal replacement therapy, RRT) presents challenges due to elevated complication risks. Concerns about contrast-related kidney damage may lead to the omission of guideline-directed therapies like percutaneous coronary intervention (PCI) or coronary artery bypass grafting (CABG) in this population.Methods:We analyzed German-DRG data of 2016 provided by the German Federal Bureau of Statistics (DESTATIS). We included cases with a primary diagnosis of AMI (ST-Elevation Myocardial Infarction (STEMI) or Non-ST-Elevation Myocardial Infarction (NSTEMI) ICD-10: I21 or I22) with and without CKD or RRT. We calculated crude- and age-standardized hospitalization rates (ASR, per 100,000 person years). Furthermore, we calculated log-binominal regression models adjusting for sex, CKD, RRT, comorbidities, and place of residence to estimate adjusted relative-risks (aRR) for receiving treatments of interest in AMI, such as PCI or CABG.Results:We identified 69,728 STEMI-cases and 147,786 NSTEMI-cases. STEMI-cases without CKD had percutaneous coronary intervention (PCI) in 80.1%. In contrast, STEMI-cases with CKD or RRT had PCI in 69.7% and 71.2%, respectively. The ASR for STEMI-cases amounted to 62.3 (95%CI 61.8-62.8) per 100,000 person years, whereas the ASR for NSTEMI-cases was 122.4 (95%CI 121.7-123.0) per 100,000 person years. In regression analysis AMI-cases with CKD were less likely treated with PCI (aRR: 0.89 (95%CI 0.88-0.90)), compared to cases without CKD. AMI-Cases with RRT showed no difference in PCI rates (aRR: 1.0 (95%CI 0.97-1.03)) but were more frequently treated with CABG (aRR: 2.20 (95%CI 2.03-2.39)). Conversely, CKD was negatively associated with CABG (aRR: 0.71, 95%CI 0.67-0.75) when non-CKD cases were used as the reference group.Conclusion:We show that AMI-cases with CKD underwent PCI less frequently, while RRT has no discernible impact on PCI utilization in AMI. Furthermore, AMI-cases with RRT exhibited a higher CABG rate.
DOI: 10.34740/kaggle/dsv/7141354
title: Monthly Bilateral USD Exchange Rates 2013-2023
DOI: 10.48529/6hwp-3398
title: Enterprise Survey 2005
title: ROU_2005_ES_v01_M_WB
DOI: 10.48529/swpt-2v36
title: Jobs, Skills, and Migration Survey 2013
title: UZB_2013_JSMS_v01_M
DOI: 10.48529/1nd9-mv73
title: National Longitudinal Phone Survey 2021-2023
title: NGA_2021-2023_NLPS_v06_M
DOI: 10.48529/egw2-w237
title: Harmonized Database of Forcibly Displaced Populations and Their Hosts 2015-2020
title: WLD_2015-2020_FDPs_v01_M
DOI: 10.48529/d9v5-xe67
title: Plan Foncier Rural Impact Evaluation 2022
title: BEN_2022_PFRIE-EL_v01_M
DOI: 10.48529/rsw0-h351
title: Plan Foncier Rural Impact Evaluation 2018
title: BEN_2018_PFRIE-BL_v01_M
DOI: 10.48529/8250-5h43
title: High Frequency Phone Survey 2020-2023
title: ETH_2020-2023_HFPS_v12_M
DOI: 10.6073/pasta/ce213dbf3b3ae82c8bbfd4930b8d7dca
title: Desert Fertilization Experiment: investigation of Sonoran desert ecosystem response to atmospheric deposition and experimental nutrient addition, ongoing since 2006

description: Launched in 2006 with support from the National Science Foundation (NSF) and leveraged by the CAP LTER, the Carbon and Nitrogen deposition (CNdep) project sought to answer the fundamental question of whether elemental cycles in urban ecosystems are qualitatively different from those in non-urban ecosystems. Ecosystem scientists, atmospheric chemists, and biogeochemists tested the hypothesis that distinct biogeochemical pathways result from elevated inorganic nitrogen and organic carbon deposition from the atmosphere to the land. To test the hypothesis, scientists examined the responsiveness of Sonoran desert ecosystems to nutrient enrichment by capitalizing on a gradient of atmospheric deposition in and around the greater Phoenix metropolitan area. Fifteen desert study sites were established, with five locations each west and east of the urban core, and in the urban core in desert preserves. In addition to the gradient of atmospheric deposition in and around the urban core, select study plots at each of the fifteen desert locations receive amendments of nitrogen, phosphorus, or nitrogen + phosphorus fertilizer. Measured variables include soil properties, perennial and annual plant growth, and atmospheric deposition of nitrogen. At the close of the initial grant period, the CAP LTER assumed responsibility for the project, renamed the Desert Fertilization Experiment, which provides a remarkable platform to study the long-term effects of nutrient enrichment on desert ecosystem properties.
DOI: 10.5281/zenodo.8226502
title: The draft genome of Spiraea crenata L. – the first complete genome of Spiraeeae

description: Spiraea crenata L. is a deciduous shrub distributed across the Eurasian steppe zone. The species is of cultural and horticultural importance and occurs in scattered populations throughout its westernmost range. Currently, there is no genomic information on the tribe of Spiraeeae. Therefore, we sequenced and assembled the whole genome of S. crenata using second- and third-generation sequencing and a hybrid assembly approach to expand genomic resources for conservation and support research on this horticulturally important lineage. In addition to the organellar genomes (i.e., the plastome and the mitochondrion), we present the first draft genome of the species with an estimated size of 220 Mbp, an N50 value of 7.7 Mbp, and a BUSCO score of 96.0%. Being the first complete genome of Spiraeeae, this may not only be the first step in the genomic study of a rare plant, but also a contribution to genomic resources supporting the study of biodiversity and evolutionary history of the Rosaceae.
DOI: 10.5281/zenodo.8226503
title: The draft genome of Spiraea crenata L. – the first complete genome of Spiraeeae

description: <em>Spiraea crenata</em> L. is a deciduous shrub distributed across the Eurasian steppe zone. The species is of cultural and horticultural importance and occurs in scattered populations throughout its westernmost range. Currently, there is no genomic information on the tribe of Spiraeeae. Therefore, we sequenced and assembled the whole genome of <em>S. crenata</em> using second- and third-generation sequencing and a hybrid assembly approach to expand genomic resources for conservation and support research on this horticulturally important lineage. In addition to the organellar genomes (i.e., the plastome and the mitochondrion), we present the first draft genome of the species with an estimated size of 220 Mbp, an N50 value of 7.7 Mbp, and a BUSCO score of 96.0%. Being the first complete genome of Spiraeeae, this may not only be the first step in the genomic study of a rare plant, but also a contribution to genomic resources supporting the study of biodiversity and evolutionary history of the Rosaceae.
DOI: 10.5281/zenodo.8226512
title: The draft genome of Spiraea crenata L. – the first complete genome of Spiraeeae

description: Spiraea crenata L. is a deciduous shrub distributed across the Eurasian steppe zone. The species is of cultural and horticultural importance and occurs in scattered populations throughout its westernmost range. Currently, there is no genomic information on the tribe of Spiraeeae. Therefore, we sequenced and assembled the whole genome of S. crenata using second- and third-generation sequencing and a hybrid assembly approach to expand genomic resources for conservation and support research on this horticulturally important lineage. In addition to the organellar genomes (i.e., the plastome and the mitochondrion), we present the first draft genome of the species with an estimated size of 220 Mbp, an N50 value of 7.7 Mbp, and a BUSCO score of 96.0%. Being the first complete genome of Spiraeeae, this may not only be the first step in the genomic study of a rare plant, but also a contribution to genomic resources supporting the study of biodiversity and evolutionary history of the Rosaceae.
DOI: 10.5281/zenodo.10257451
title: Microbiome depletion and recovery in the sea anemone, Aiptasia, following antibiotic exposure

description: This provides data for the manuscript Microbiome depletion and recovery in the sea anemone, Aiptasia, following antibiotic exposure; 16smetadata.xlsx file used for in the DADA2 pipeline is provided, and the CFU count data is provided in cfu-counts-2022-01-20-modified.csv. The data for total protein content, pedal lacerate counts and algal abundance can all be found in the physio-2022-01-20.csv with the associated dataset (i.e. protein, algae, pedal lacerates) specified in the variable column.
DOI: 10.34740/kaggle/dsv/7141620
title: Trending Youtube Video Statistics (113 Countries)
DOI: 10.34740/kaggle/dsv/7141622
title: Top Spotify Songs in 73 Countries (Daily Updated)
DOI: 10.5281/zenodo.10222230
title: Transition between distinct hybrid skyrmion textures through their hexagonal-to-square crystal transformation in a polar magnet

description: The file Manuscript data files.7z contains the experimental data used for creating the figures in the manuscript entitled "Transition between distinct hybrid skyrmion textures through their hexagonal-to-square crystal transformation in a polar magnet" that appear in Nature Communications 14, 8050 (2023).
Paper abstract: Magnetic skyrmions, topological vortex-like spin textures, garner significant interest due to their unique properties and potential applications in nanotechnology. While they typically form a hexagonal crystal with distinct internal magnetisation textures known as Bloch- or Néel-type, recent theories suggest the possibility for direct transitions between skyrmion crystals of different lattice structures and internal textures. To date however, experimental evidence for these potentially useful phenomena have remained scarce. Here, we discover the polar tetragonal magnet EuNiGe3 to host two hybrid skyrmion phases, each with distinct internal textures characterised by anisotropic combinations of Bloch- and Néel-type windings.  Variation of the magnetic field drives a direct transition between the two phases, with the modification of the hybrid texture concomitant with a hexagonal-to-square skyrmion crystal transformation. We explain these observations with a theory that includes the key ingredients of momentum-resolved Ruderman–Kittel–Kasuya–Yosida and Dzyaloshinskii-Moriya interactions that compete at the observed low symmetry magnetic skyrmion crystal wavevectors. Our findings underscore the potential of polar magnets with rich interaction schemes as promising for discovering new topological magnetic phases.
DOI: 10.5281/zenodo.10222231
title: Transition between distinct hybrid skyrmion textures through their hexagonal-to-square crystal transformation in a polar magnet

description: The file Manuscript data files.7z contains the experimental data used for creating the figures in the manuscript entitled "Transition between distinct hybrid skyrmion textures through their hexagonal-to-square crystal transformation in a polar magnet" that appear in Nature Communications 14, 8050 (2023).
Paper abstract: Magnetic skyrmions, topological vortex-like spin textures, garner significant interest due to their unique properties and potential applications in nanotechnology. While they typically form a hexagonal crystal with distinct internal magnetisation textures known as Bloch- or Néel-type, recent theories suggest the possibility for direct transitions between skyrmion crystals of different lattice structures and internal textures. To date however, experimental evidence for these potentially useful phenomena have remained scarce. Here, we discover the polar tetragonal magnet EuNiGe3 to host two hybrid skyrmion phases, each with distinct internal textures characterised by anisotropic combinations of Bloch- and Néel-type windings.  Variation of the magnetic field drives a direct transition between the two phases, with the modification of the hybrid texture concomitant with a hexagonal-to-square skyrmion crystal transformation. We explain these observations with a theory that includes the key ingredients of momentum-resolved Ruderman–Kittel–Kasuya–Yosida and Dzyaloshinskii-Moriya interactions that compete at the observed low symmetry magnetic skyrmion crystal wavevectors. Our findings underscore the potential of polar magnets with rich interaction schemes as promising for discovering new topological magnetic phases.
DOI: 10.34740/kaggle/dsv/7141623
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.5281/zenodo.10278372
title: Dataset for "Explainable Offline-Online Training of Neural Networks for Parameterizations: A 1D Gravity Wave-QBO Testbed in the Small-data Regime" by Pahlavan et al. (2023)
DOI: 10.48704/ird_nacd2_mgzn2
title: NaCd2_MgZn2
DOI: 10.48704/ird_na2cd11_mg2zn11
title: Na2Cd11_Mg2Zn11
DOI: 10.5281/zenodo.10257452
title: Microbiome depletion and recovery in the sea anemone, Aiptasia, following antibiotic exposure

description: This provides data for the manuscript Microbiome depletion and recovery in the sea anemone, Aiptasia, following antibiotic exposure; 16smetadata.xlsx file used for in the DADA2 pipeline is provided, and the CFU count data is provided in cfu-counts-2022-01-20-modified.csv. The data for total protein content, pedal lacerate counts and algal abundance can all be found in the physio-2022-01-20.csv with the associated dataset (i.e. protein, algae, pedal lacerates) specified in the variable column.
DOI: 10.34740/kaggle/dsv/7141719
title: Full TMDB Movies Dataset 2023 (930K Movies)
DOI: 10.5281/zenodo.8306512
title: Photoactivation of the Orange Carotenoid Protein Requires Two Light-Driven Reactions Mediated by a Metastable Monomeric Intermediate – Absorption Spectra and Global Analysis Results, Molecular Dynamics Simulations

description: Time-resolved absorption and molecular dynamics trajectory datasets associated with: Rose, J. B.; Gascón, J. A.; Sutter, M.; Sheppard, D. I.; Kerfeld, C. A.; Beck, W. F. Photoactivation of the Orange Carotenoid Protein Requires Two Light-Driven Reactions Mediated by a Metastable Monomeric Intermediate. Phys. Chem. Chem. Phys. 2023, DOI: 10.1039/d3cp04484j.
DOI: 10.5281/zenodo.8306513
title: Photoactivation of the Orange Carotenoid Protein Requires Two Light-Driven Reactions Mediated by a Metastable Monomeric Intermediate – Absorption Spectra and Global Analysis Results, Molecular Dynamics Simulations

description: Time-resolved absorption and molecular dynamics trajectory datasets associated with: Rose, J. B.; Gascón, J. A.; Sutter, M.; Sheppard, D. I.; Kerfeld, C. A.; Beck, W. F. Photoactivation of the Orange Carotenoid Protein Requires Two Light-Driven Reactions Mediated by a Metastable Monomeric Intermediate. Phys. Chem. Chem. Phys. 2023, DOI: 10.1039/d3cp04484j.
DOI: 10.5517/ccdc.csd.cc2h263x
title: CCDC 2296018: Experimental Crystal Structure Determination

description: Related Article: Léa N. C. Rochet, Calise Bahou, Jonathan P. Wojciechowski, Ilias Koutsopetras, Phyllida Britton, Richard J. Spears, Ioanna A. Thanasi, Baihao Shao, Lisha Zhong, Dejan-Krešimir Bučar, Abil E. Aliev, Michael J. Porter, Molly M. Stevens, James R. Baker, Vijay Chudasama|2023|Chemical Science|14|13743|doi:10.1039/D3SC04976K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.24760215
title: <b>Carbon stock losses, greenhouse gas emissions and social carbon costs arising from conversion of tropical peatlands to water buffalo pastures in the lower Amazon</b>

description: Tropical peat swamp forests provide many important ecosystem services especially their function as global carbon sinks. These carbon-rich wetlands are widespread in South America, yet few studies have examined carbon stocks or losses due to land use change. In the lower Amazon they are being converted to pastures largely utilized by water buffalo (Bubalus bubalis). We quantified carbon stocks in intact peat forests and recently converted pastures (&lt;10 years) at the Lago Piratuba Biosphere Reserve (LPBR) in the lower Amazon of Brazil. The soils of intact forests were typified by shallow organic (peat) horizons at the soil surface. The mean total ecosystem carbon stock (TECS) in intact forests was 354 ± 28 Mg C ha-1. In contrast, the TECS of disturbed sites was significantly lower (P = 0.02) with a mean of 248 ± 17 Mg C ha-1. We estimated greenhouse gas (GHG) emissions from water buffalo (due to enteric fermentation and manure deposition) to be 7.5 Mg CO2e ha-1 year-1. Considering GHG emissions from this land use, the social carbon costs (SCC) arising from the degradation of coastal Amazon peatlands is as high as $2,742 USD ha-1 year-1. The SCC of meat produced from this land use is as high as $100 USD/kg of meat produced which far exceeds the economic returns from livestock. Based on the estimated numbers of water buffalo for the southern portion of the LPBR, and the time since initial disturbance the annual GHG emissions from this land use is estimated to be 602,846 Mg CO2e year-1 with a SCC is as high as $111,526,524 million USD year-1. This land use also eliminates opportunity values and services of carbon storage and biodiversity that would be possible from a regenerating Biosphere Reserve.
DOI: 10.6084/m9.figshare.24760212
title: Yeast Respiration Images

description: <i>Mitochondria were fluorescently tagged using COX4-GFP. The endoplasmic reticulum was marked using SS-mCherry-HDEL. </i>
DOI: 10.6084/m9.figshare.24760212.v1
title: Yeast Respiration Images

description: <i>Mitochondria were fluorescently tagged using COX4-GFP. The endoplasmic reticulum was marked using SS-mCherry-HDEL. </i>
DOI: 10.6084/m9.figshare.24759615
title: AgriMPs_SJC_DataFile.xlsx

description: The data file supports the manuscript entitled 'Agricultural fertilisers contribute substantially to microplastic concentrations in UK soils'.Data from microplastic analysis of agricultural soils from the Broadbalk winter wheat experiment at Rothamsted Research. The available data is part of a time-series analysis of soils from the Rothamsted Sample Archive.
DOI: 10.6084/m9.figshare.24760221
title: Yeast Fermentation Images

description: <i>Mitochondria were fluorescently tagged using COX4-GFP. The endoplasmic reticulum was marked using SS-mCherry-HDEL.</i>
DOI: 10.6084/m9.figshare.24760128
title: Yeast Timelapse Images

description: <i>Mitochondria were fluorescently tagged using COX4-GFP. The endoplasmic reticulum was marked using SS-mCherry-HDEL.</i>
DOI: 10.6084/m9.figshare.24760128.v1
title: Yeast Timelapse Images

description: <i>Mitochondria were fluorescently tagged using COX4-GFP. The endoplasmic reticulum was marked using SS-mCherry-HDEL.</i>
DOI: 10.34740/kaggle/dsv/7141914
title: Daily Public Opinion on Israel-Palestine War
DOI: 10.6084/m9.figshare.24760239
title: Yeast Transition Images

description: <i>Mitochondria were fluorescently tagged using COX4-GFP. The endoplasmic reticulum was marked using SS-mCherry-HDEL.</i>
DOI: 10.6084/m9.figshare.24760239.v1
title: Yeast Transition Images

description: <i>Mitochondria were fluorescently tagged using COX4-GFP. The endoplasmic reticulum was marked using SS-mCherry-HDEL.</i>
DOI: 10.7303/syn53128146
title: Characterizing Molecular and Synaptic Signatures in mouse models of Late-Onset Alzheimer's Disease Independent of Amyloid and Tau Pathology
DOI: 10.6084/m9.figshare.24760245
title: Mammalian Mito-ER Images

description: Mito-BFP (Addgene, Voeltz Lab, 49151) was used for visualization of mitochondria and GFP-Sec61b (Addgene, Rapoport Lab, 15108) was used for visualization of the endoplasmic reticulum (ER).