cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/npnwgdfbv4
title: FeynHiggs: a program for the calculation of the masses of the neutral CP-even Higgs bosons in the MSSM

description: Abstract FeynHiggs is a Fortran code for the calculation of the masses of the neutral CP-even Higgs bosons in the MSSM up to two-loop order. It is based on the complete diagrammatic on-shell result at the one-loop level, the leading diagrammatic two-loop QCD contributions and further improvements taking into account leading electroweak two-loop and leading higher-order QCD corrections. The Higgs-boson masses are calculated as functions of the MSSM parameters for general mixing... Title of program: FeynHiggs Catalogue Id: ADKT_v1_0 Nature of problem The masses of the neutral CP-even Higgs bosons in the MSSM can be calculated in terms of the other model parameters. Large corrections to the masses at the one-loop level require a two-loop calculation. Versions of this program held in the CPC repository in Mendeley Data ADKT_v1_0; FeynHiggs; 10.1016/S0010-4655(99)00364-1 ADKT_v2_0; FeynHiggs v2.6.5; 10.1016/j.cpc.2009.02.014 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.3535/3m2-99x-fyh
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7cc-hkh-cth
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/8z2gf2nvns
title: Effect of Polluted and Non-Polluted Water on Zooplankton Diversity at Tropical Palustrine Habitat, Central Gujarat, India

description: The aim of the present study was to observe effect of polluted and non-polluted water on zooplankton at tropical palustrine habitat, Central Gujarat, India. For this, two ponds were selected (January to April, 2014). Status of water pollution was determined as per CPCB and GPCB standards. To determine degree of pollution, surface water quality parameters such as Temperature (T), pH, Dissolved Oxygen (DO), Total Solids (TS), Total Suspended Solids (TSS), Total Dissolved Solids (TDS), Free CO2 (FC), Phenolphthalein Alkalinity (PA), Total Alkalinity (TA), Carbonates (CB), Bicarbonates (BC), Total Hardness (TH), Calcium (Ca), Magnesium (Mg), Chloride (Cl), Salinity (SL), Sulfate, Phosphate, Nitrate, Chromium (Cr) and Iron (Fe) were analyzed. Based on findings, studied ponds were categorized as Polluted (PP) & Non-Polluted (NP). Almost all the water quality parameters were found within prescribed limits at NP, whereas most of them were observed beyond the permissible limits at PP. At PP, Correlation Coefficient Matrix (r) revealed strong positive correlation between T & TA, pH & TS, DO & TH, TS & TSS, TSS & Ca, TDS & Mg, PA & CB, TA with Cl & SL, CB & Ca, BC & Nitrate, TH & Ca with Cr, Mg & Fe, Cl & SL, SL & Sulfate, Sulfate & Phosphate, Phosphate & Nitrate, and Nitrate & Cr with Fe. While at NP, strong positive association was observed in following parameters (PA with pH & TSS, TA & TDS, CB with pH, TSS & PA, TH & TS, Ca & DO, Mg & TH, Sulfate & CB, Phosphate & Mg, Nitrate with Temperature, TA, BC, Cl, SL & Phosphate, Cr & Nitrate, and Fe with Ca & Sulfate. Overall, five classes of zooplankton were reported viz. Rhizopoda (RP), Zooflagellata (ZF), Rotifera (RF), Copepoda (CP), and Ciliophora (CF). Of which, CP was observed only at PP, and CF at NP. 12 species was documented at PP (1: Abundant, 7: Common, 4: Rare), while only 9 species were reported (1: Abundant, 4: Common & Rare each) at NP. This may be due to blooming of pollution indicator species of zooplankton, exclusively represented by CP in waters of PP. At PP, Correlation Coefficient Matrix (r) revealed strong positive correlation between TS & RP, Cr & ZF, TSS & RF, and TH & CP. Contrarily, FC did not exhibit any correlation with none of the zooplankton. Strikingly, CB & Phosphate favored RP & RF, Mg to ZF, and Fe to ZF & CP. At NP, DO showed strong positive correlation with CF, TS with RP & RF, and Cr with ZF. Interestingly, pH & Cr showed null correlation with RF. Here also, FC did not exhibit any correlation with none of the zooplankton classes. As a part of conservation and management strategies, central water treatment plant should be installed at PP to eliminate the pollution indicator species of zooplankton to revive the affluent status of water body for enduring sustainability of a tropical palustrine aquatic ecosystem of Central Gujarat, India.
DOI: 10.17632/kzvhfhnrt8
title: KuhlmanLab_2020_DevelopmentOfNaturalSceneRepresentationSuppl

description: These data are related to our 2020 publication, Kowalewski et al. Development of Natural Scene Representation in Primary Visual Cortex Requires Early Postnatal Experience, Current Biology https://doi.org/10.1016/j.cub.2020.10.046 Development of the visual system is shaped by early-life experience. Using 2-photon calcium imaging in mice, Kowalewski et al. find that visual experience reduces the number of neurons required to effectively encode grating stimuli and enhances natural scene representation by directly increasing V1 responsiveness to natural scene features. An example eye tracking movie is included, as well as the natural scene stimuli presented.
DOI: 10.3535/476-k47-c10
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/df5-y2w-h3y
title: Alces alces (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x4n-wx0-h4e
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19085483.v1
title: NYC Opera Companies formed since 2000

description: This spreadsheet of opera companies in New York City formed since 2000 was first posted online as a shared as an Airtable view on 20 January 2016. The data was extracted from a larger dataset of US opera companies formed since 2000 when the author noticed a disproportionate number groups were based in New York City. <br>The downloadable XLSX file above is from an import of an exported CSV file from the Airtable view.<br>Original Airtable view and first mention of the spreadsheet at <i>Mae Mai</i> in <i>References</i> below.<br>
DOI: 10.6084/m9.figshare.19412147.v1
title: Black Hole Weather Forecasting with Deep Learning: A Pilot Study

description: This repository contains the data files containing the convolutional neural network weights resulting from our multi GPU training using Tensorflow v1.8.0. Both files are in the HDF5 binary format. The results from this architecture was published in <em>Black Hole Weather Forecasting with Deep Learning: A Pilot Study</em> (Duarte, Nemmen & Navarro, MNRAS, in press). • dl_fluids.h5: one-sim model• dl_fluids-1.h5: multi-sim modelPlease refer to the source file<code>inference.py</code> available in the github repository (https://github.com/black-hole-group/DL_BH_fluids), which demonstrates how to create predictions using these data files. In particular, you can load the weights using <code>model.load("/path/to/.h5/dl_fluids.h5").</code><br>
DOI: 10.3535/t6t-8tr-es7
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25556157.v2
title: Large Language Model-based suggestion of objective functions for search-based Product Line Architecture design

description: This work delves into the complex domain of Product Line Architecture (PLA) optimization, a critical area in Software Engineering (SE) focused on enhancing the design and functionality of software product lines through variability management and reuse. A particular challenge in this area is the selection of optimal objective functions, a core aspect of interactive Search-Based Software Engineering (SBSE) that significantly influences the success of search-based PLA design. Despite its importance, this task remains daunting due to the vast design space and the critical impact of chosen objectives on the optimization outcome. Language Learning Models (LLMs), particularly the Generative Pre-trained Transformer series (GPT), have shown promising results to help in various SE tasks. This paper explores the integration of such LLMs, notably ChatGPT, into the search-based PLA design. By leveraging LLMs' capacity to understand and generate human-like text, we investigate their potential to assist decision-makers (DMs) by proposing a module of suggestions of objective functions, thereby simplifying and improving decision-making in PLA design optimization. Through empirical tests combined with qualitative feedback from domain experts, this research highlights the application of LLMs in SE and maps out the challenges and opportunities that lie ahead in fully harnessing their potential for PLA search-based design. Exploratory testing and expert feedback confirm ChatGPT's potential in suggesting objective functions for search-based PLA design.
DOI: 10.3535/0pd-7l5-1fw
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1pg-vfl-qms
title: Castor fiber Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23904933.v1
title: SVC scores (linear kernel and C=1)

description: The datasets presented in this repository are obtained by applying the support vector classifier (SVC) algorithm with the following specific hyperparameter setting and the different inputs that have been described in the journal paper: "<b>Data mining techniques for endometriosis detection in a data-scarce medical dataset</b>".HyperparametersC: 1.0kernel: linearmax_iter: 1000000Files<b>result_eb.csv</b>: Results for EB sample type.<b>result_ef.csv</b>: Results for EF sample type.<b>result_vagina.csv</b>: Results for vagina sample type.<b>result_oral.csv</b>: Results for oral sample type.<b>result_feces.csv</b>: Results for feces sample type.<b>result_frt.csv</b>: Results for FRT (EB + EF + vagina) sample type.<b>result_frt2.csv</b>: Results for FRT2 (EB + vagina) sample type.<b>properties_eb.log</b>: Arguments and result information for EB sample type (C, n_split, kernel, gamma, max_iter, random_state, len_scores_before_filtering, len_scores_after_filtering, len_f1).<b>properties_ef.log</b>: Arguments and result information for EF sample type.<b>properties_vagina.log</b>: Arguments and result information for vagina sample type.<b>properties_oral.log</b>: Arguments and result information for oral sample type.<b>properties_feces.log</b>: Arguments and result information for feces sample type.<b>properties_frt.log</b>: Arguments and result information for FRT sample type.<b>properties_frt2.log</b>: Arguments and result information for FRT2 sample type.<br>
DOI: 10.3535/rrh-wbh-7ct
title: Cerastoderma glaucum (Bruguière, 1789)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sc7-z50-m2r
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1cc-rlj-b0j
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/azh-eyx-nsb
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/ft74ykzdzs
title: location and stratigraphic interpretation of floodplain cross-sections for the Upper Dee valley (eastern Scotland).

description: This dataset contains the interpreted stratigraphic cross-sections (in .pdf) and their location (in .kmz) for all studied floodplain locations in Swinnen et al. (2020) Geomorphic controls on floodplain sediment and soil organic carbon storage in a Scottish mountain river. Earth Surface Processes and Landforms 45, 207-223. DOI: 10.1002/esp.4729
DOI: 10.3535/0ed-l0s-fa0
title: †Rhynchonella Fischer de Waldheim, 1809

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ka0-q9y-2gm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23804820.v1
title: Genome annotation of <i>Nibea albiflora</i>

description: Genome annotation of <i>Nibea albiflora</i> provided an important basis for the subsequent research of genetic breeding and genome evolution of <i>Nibea albiflora</i>.
DOI: 10.6084/m9.figshare.3201988.v1
title: Taxi Time Series

description: These are time series from the NYC Taxi data used in the following paper:<br><i>Data Polygamy: The Many-Many Relationships among Urban Spatio-Temporal Data Sets, F. Chirigati, H. Doraiswamy, T. Damoulas, and J. Freire. In Proceedings of the 2016 ACM SIGMOD International Conference on Management of Data (SIGMOD), 2016</i>
DOI: 10.3535/lad-3m3-ch1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lnk-7q8-gly
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/c9tpyyf2gv
title: Replication data for the GRL manuscript 2020GL091162

description: Data for the GRL manuscript 2020GL091162 named "A new technique for separating potential field anomalies of similar wavelengths" Contents fig-3 netcdf files for the first synthetic example shown in the Figure 3. fig-4 netcdf files for the second synthetic example shown in the Figure 4. fig-5 netcdf files for the real-world example shown in the Figure 5 and supplementary information.
DOI: 10.3535/0kd-cfs-afn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fjj-wrc-l5c
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24564367.v1
title: Farmers Table

description: This is the table for the Seccion 3.4
DOI: 10.17632/ff6t85jmwg
title: Chlamydia and HLA

description: This database consists of the articles reviewed in the paper "Chlamydia trachomatis and the HLA involvement in the development of the infection and disease: a systematic review".
DOI: 10.3535/4jk-sgm-k9f
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r1w-r8v-dmh
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/d98s4x8xn5
title: Quantum calculations of transport properties in molecular gases

description: Abstract A new program to calculate the various generalized cross sections which govern the transport and relaxation properties of binary atom-diatom (rigid rotor) gaseous mixtures is described in detail. It processes the collisionS-matrix calculated either in theexact close-coupling (CC) scheme or in the coupled-state (CS) approximation, as they are generated by themolscat code, to obtain the energy and temperature dependent cross sections needed to evaluate the transport coefficients and the relaxat... Title of program: SBECROSS Catalogue Id: ADFB_v1_0 Nature of problem The generalized cross sections involved in the calculation of transport properties are obtained for atom-diatom gaseous mixtures within the range of applicability of the WCUB theory. Versions of this program held in the CPC repository in Mendeley Data ADFB_v1_0; SBECROSS; 10.1016/S0010-4655(96)00150-6 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/y5c2dfrk4r
title: Political ideology and motivated reasoning on political polarization regarding COVID-19 NPIs

description: Data for artícle "Motivated reasoning and political ideology fueled political polarization regarding COVID- 19 health recommendations in Spanish society: an experimental study"
DOI: 10.3535/chd-m7g-0n5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13426874.v4
title: MODIS_MCD12Q1_proportions

description: MODIS proportional summaries from a 2500m radius.<br>Data associated with "A comparison of remotely sensed environmental predictors for avian distributions" (2022).<br>
DOI: 10.6084/m9.figshare.28660403.v1
title: Data to reproduce Figures 1-3 and associated supplemental figures

description: Cellular RNA levels are a product of synthesis and degradation kinetics, which can differ among transcripts of the same gene. An important cause of isoform-specific decay is the nonsense-mediated mRNA decay (NMD) pathway, which degrades transcripts with premature termination codons (PTCs) and other features. Understanding NMD functions requires strategies to quantify isoform kinetics; however, current approaches remain limited. Methods like nucleotide-recoding RNA-seq (NR-seq) enable insights into RNA kinetics, but existing bioinformatic tools do not provide robust, isoform-specific degradation rate constant estimates. We extend the EZbakR-suite by implementing a strategy to infer isoform-level kinetics from short-read NR-seq data. This approach uncovers unexpected variability in NMD efficiency among transcripts with conserved PTC-containing exons and rapid decay of a subset of mRNAs lacking PTCs. Our findings highlight the effects of competition between NMD and other decay pathways, provide mechanistic insights into established NMD efficiency correlates, and identify transcript features promoting efficient decay.
DOI: 10.3535/p46-gr8-sxr
title: Castor fiber Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r8b-ghc-egd
title: Cornulites cellulosus Herringshaw et al., 2007

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17028/rd.lboro.22189213.v1
title: Supplementary information file for “Is this a new dawn for accessibility?” A qualitative interview study assessing teleworking experiences in adults with physical disabilities post Covid-19

description: Supplementary file for article “Is this a new dawn for accessibility?” A qualitative interview study assessing teleworking experiences in adults with physical disabilities post Covid-19 Background While employers plan how to restructure working practices after the initial response to the Covid-19 pandemic, it is essential that the disability community are represented in research addressing telework; their expertise is invaluable for ensuring equity from the outset. <br> Objective The current study qualitatively investigated how people with physical disabilities negotiate telework in a post-Covid era. <br> Methods Ten participants with a range of physical disabilities were recruited and interviewed. Themes were generated from the data utilising an established method of reflexive inductive thematic analysis. <br> Results Increased flexibility as well as control over work schedules and the environment facilitated by teleworking, improved participants’ disability management, health, work performance, and personal opportunities. However, the importance of choice to work in-office, of implementing additional physical and virtual work adjustments, and of flexible work patterns to remove barriers to accessibility when homeworking was emphasised. Active efforts by employers to create an inclusive and flexible work culture were identified as crucial to ensure that integration and professional development of employees with disabilities, understanding of disability experience, and normalisation of accessibility needs are not diminished by the decreased visibility incurred by teleworking. <br> Conclusions Teleworking is not a panacea for resolving the disability employment disadvantage. Rather, teleworking could be a springboard upon which further flexibility and choice can be built to shift organisational practices to better accommodate individual employees, with and without disabilities, post-Covid. It is imperative to act on such insights to create accessible workplaces to facilitate more inclusive workforces.
DOI: 10.17632/fj78mnykjn
title: raw data-Automatic segmentation of multiple cardiovascular structures from cardiac computed tomography angiography images using deep learning

description: research data of the work
DOI: 10.3535/lb4-mhw-dcs
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vta-bkx-se8
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.25573/data.25374244.v2
title: Supporting Datasets for "Parameterizing Pantherinae: <i>de novo </i>mutation rate estimates from <i>Panthera </i>and <i>Neofelis</i> pedigrees"

description: RatesTools configuration files and additional datasets for <i>Panthera</i> and <i>Neofelis</i> <i>de novo</i> mutation analyses. Configuration files are named using the convention: species_reference_dataset.config. Two configuration files are provided for each of the <i>Neofelis </i>runs as the two siblings required different minimum genotype quality (GQ) cut-offs.Also provided is the list of lion y-mers and and 'mappable' genome assembly of the newly reported lion genome in FASTA format. The mappable genome consists of the assembly's haplotype 2 (including X chromosome) with the Y chromosome added.
DOI: 10.3535/jfl-7wz-aks
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m7n-7ay-k59
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1117933.v1
title: Surface models of lateral and medial menisci derived from OAI non-expose cohort

description: 50 pairs LM and MM segmented from 50 subjects of the Osteoarthritis Initiative (OAI) non-expose subcohort at the enrollment point.
DOI: 10.6084/m9.figshare.19345958.v3
title: SLE data

description: For the AG Röszer
DOI: 10.17632/zysyyw8z7m
title: Discriminant Analysis between Asian weaver ant Brood and Barrack nests 

description: 1. Investigation of Oecophylla smaragdina growth stage development as : incipient immature pre matured and matured colonies based on the number of occupied palm trees over time from first month to about 4-5 years of colony age. 
2.  Asian weaver ant nest distribution pattern in oil palm trees from selected plantations (Malaysian Palm Oil Board MPOB Teluk Intan, Perak - Universiti Malaya, Felcra, Boustead plantations Kota Tinggi Sg. Arah Johor - )

3. Determination of colonies age by Pearson correlation coefficient and Poisson Probability analysis. 

4. Study of the visual distinction between the brood and barrack nests of the Asian weaver ant colonies in the occupied oil palm plantation in South-East Asia (Malaysia-Indonesia). The discriminant analysis DA determined the height from the ground represented the nest location in the palm canopies as being the main factor helping to visually identify the brood from the barrack nests. The brood nest are located at higher position from ground with a range of 6-15 meters and the barracks nests are located at a range of 4 to 5 m in this study. This is done first time. This is in conjunction for future biological control trial on the invasive bagworm species Metisa plana (defoliator) causing serious yield fresh fruit bunches loss with low quality for over two years period.
DOI: 10.3535/hjy-0ea-9ap
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tgv-d84-vx0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.