cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.tre2cd
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "TaxonKey is Ophrys speculum subsp. speculum"
 ]
}

 The dataset includes 245 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020777-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hcunnp
title: Occurrence Download

description: A dataset containing 972 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Oenothera royfraseri R.R.Gates",
 "TaxonKey is Oenothera ×rubricaulis Kleb.",
 "TaxonKey is Oenothera ×rubricauloides Rostanski",
 "TaxonKey is Oenothera ×scandinavica Rostanski"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 972 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015682-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cp7xev
title: Occurrence Download

description: A dataset containing 52177 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ixodes Latreille, 1795"
 ]
}

 The dataset includes 52177 records from 505 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020036-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive2892.20241212.9.2
title: Acidovorax temperans Willems et al. 1990

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2893.20241212.9.2
title: Acidovorax konjaci (Goto 1983) Willems et al. 1992

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2896.20241212.9.2
title: Acidovorax sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2898.20241212.9.2
title: Acidovorax defluvii Schulze et al. 1999

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2899.20241212.9.2
title: Acidovorax valerianellae Gardan et al. 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2900.20241212.9.2
title: Acidovorax anthurii Gardan et al. 2000

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.12818567
title: Dataset for "Joint zonated quantification of multiple parameters in hepatic lobules"

description: Datasets for the publication "Joint zonated quantification of multiple parameters in hepatic lobules" (under review)
DOI: 10.5281/zenodo.12819292
title: Dataset for "Joint zonated quantification of multiple parameters in hepatic lobules"

description: Datasets for the publication "Joint zonated quantification of multiple parameters in hepatic lobules", available at Research Square https://doi.org/10.21203/rs.3.rs-4764718/v1
DOI: 10.5281/zenodo.15082304
title: Dataset for "Joint zonated quantification of multiple parameters in hepatic lobules"

description: Datasets for the publication "Joint zonated quantification of multiple parameters in hepatic lobules", available at Research Square https://doi.org/10.21203/rs.3.rs-4764718/v1
DOI: 10.13145/bacdive2901.20241212.9.2
title: Acidovorax citrulli (Schaad et al. 1978) Schaad et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2902.20241212.9.2
title: Acidovorax cattleyae (Pavarino 1911) Schaad et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2903.20241212.9.2
title: Acidovorax caeni Heylen et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2904.20241212.9.2
title: Acidovorax soli Choi et al. 2010

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.11244210
title: "Towards Responsible Publishing" - Online researcher survey questionnaire

description: Research Consulting and the Centre for Science and Technology Studies (CWTS) were commissioned to determine to what extent the vision, mission and objectives set out in the TRP proposal serve the needs of the global research community. Through a consultative approach, we sought to assess whether there is appetite for the type of change proposed by cOAlition S in the TRP proposal. In addition, we aimed to understand how the ‘Towards Responsible Publishing’ proposal may be modified or refined to ensure it resonates with the research community and sees broad adoption; identify any showstoppers or unintended consequences and propose proactive measures to mitigate them, ensuring successful implementation; and ascertain whether the existing scholaly communication infrastructure can support this proposal and if not, identify where research funders can strengthen the infrastructure.

As part of the consultation, the Centre for Science and Technology Studies and Research Consulting developed a researcher survey to gather researcher feedback on aspects of the scholarly communication system. This deposit provides our online survey questionnaire.
description: This study has been funded by cOAlition S.
DOI: 10.5281/zenodo.11244247
title: "Towards Responsible Publishing" - Online researcher survey dataset

description: Research Consulting and the Centre for Science and Technology Studies (CWTS) were commissioned to determine to what extent the vision, mission and objectives set out in the TRP proposal serve the needs of the global research community. Through a consultative approach, we sought to assess whether there is appetite for the type of change proposed by cOAlition S in the TRP proposal. In addition, we aimed to understand how the ‘Towards Responsible Publishing’ proposal may be modified or refined to ensure it resonates with the research community and sees broad adoption; identify any showstoppers or unintended consequences and propose proactive measures to mitigate them, ensuring successful implementation; and ascertain whether the existing scholaly communication infrastructure can support this proposal and if not, identify where research funders can strengthen the infrastructure. 

As part of the consultation, the Centre for Science and Technology Studies and Research Consulting developed a researcher survey to gather researcher feedback on aspects of the scholarly communication system. This deposit provides our anonymised survey data. Please note that country information is available for all countries with at least 50 responses; in all other cases, the country has been replaced with “Other”.
description: This study has been funded by cOAlition S.
DOI: 10.5281/zenodo.11244266
title: "Towards Responsible Publishing" - Structured organisational feedback responses

description: Research Consulting and the Centre for Science and Technology Studies (CWTS) were commissioned to determine to what extent the vision, mission and objectives set out in the TRP proposal serve the needs of the global research community. Through a consultative approach, we sought to assess whether there is appetite for the type of change proposed by cOAlition S in the TRP proposal. In addition, we aimed to understand how the ‘Towards Responsible Publishing’ proposal may be modified or refined to ensure it resonates with the research community and sees broad adoption; identify any showstoppers or unintended consequences and propose proactive measures to mitigate them, ensuring successful implementation; and ascertain whether the existing scholaly communication infrastructure can support this proposal and if not, identify where research funders can strengthen the infrastructure. 

As part of our consultation, we gathered structured organisational feedback from underrepresented groups and organisations in the scholarly communication ecosystem. We received responses from a total of 10 organisations, of which 9 were willing to be named publicly in the document enclosed below and 1 opted to remain anonymous. We would like to thank our contributors, which include (in alphabetical order) Abel Laerte Packer (sciELO), Arianna Becerril García (Redalyc), Consejo Directivo LA Referencia, Red Latinoamericana y de España para la Ciencia Abierta (LA Referencia), Dominique Babini (CLASCO), Iryna Kuchma (EIFL), Kazuhiro Hayashi (NISTEP), Laura Rovelli (CLASCO), Milica Ševkušić (EIFL), Moumita Koley (IISc), Susan Veldesman (ASSAf) and Takayuki Hayashi (GRIPS). 
description: This study has been funded by cOAlition S.
DOI: 10.5281/zenodo.15166390
title: "Towards Responsible Publishing" - Thematic analysis codebook

description: Research Consulting and the Centre for Science and Technology Studies (CWTS) were commissioned to determine to what extent the vision, mission and objectives set out in the TRP proposal serve the needs of the global research community. Through a consultative approach, we sought to assess whether there is appetite for the type of change proposed by cOAlition S in the TRP proposal. In addition, we aimed to understand how the ‘Towards Responsible Publishing’ proposal may be modified or refined to ensure it resonates with the research community and sees broad adoption; identify any showstoppers or unintended consequences and propose proactive measures to mitigate them, ensuring successful implementation; and ascertain whether the existing scholaly communication infrastructure can support this proposal and if not, identify where research funders can strengthen the infrastructure.

As part of the consultation, we developed a codebook to support the thematic analysis of the initial feedback survey and focus group transcripts. This deposit provides a list of codes developed as part of this analysis.

Please note: This codebook has been developed through a process of inductive thematic coding. Inductive coding involves generating codes from the data itself to allow patterns and themes to emerge from the real data. As a result, this codebook includes statements that may be contradictory or appear to support conflicting worldviews. This arises from the need to map the contents of the data and discussions held, which included stakeholders with different drivers and viewpoints. Thematic codes are presented alphabetically and their order is not indicative of importance or frequency.

Disclaimer: Please note that the thematic codes included in the codebook do not represent the views or opinions of the authors.
description: This study has been funded by cOAlition S.
DOI: 10.5281/zenodo.15166391
title: "Towards Responsible Publishing" - Thematic analysis codebook

description: Research Consulting and the Centre for Science and Technology Studies (CWTS) were commissioned to determine to what extent the vision, mission and objectives set out in the TRP proposal serve the needs of the global research community. Through a consultative approach, we sought to assess whether there is appetite for the type of change proposed by cOAlition S in the TRP proposal. In addition, we aimed to understand how the ‘Towards Responsible Publishing’ proposal may be modified or refined to ensure it resonates with the research community and sees broad adoption; identify any showstoppers or unintended consequences and propose proactive measures to mitigate them, ensuring successful implementation; and ascertain whether the existing scholaly communication infrastructure can support this proposal and if not, identify where research funders can strengthen the infrastructure.

As part of the consultation, we developed a codebook to support the thematic analysis of the initial feedback survey and focus group transcripts. This deposit provides a list of codes developed as part of this analysis.

Please note: This codebook has been developed through a process of inductive thematic coding. Inductive coding involves generating codes from the data itself to allow patterns and themes to emerge from the real data. As a result, this codebook includes statements that may be contradictory or appear to support conflicting worldviews. This arises from the need to map the contents of the data and discussions held, which included stakeholders with different drivers and viewpoints. Thematic codes are presented alphabetically and their order is not indicative of importance or frequency.

Disclaimer: Please note that the thematic codes included in the codebook do not represent the views or opinions of the authors.
description: This study has been funded by cOAlition S.
DOI: 10.13145/bacdive2905.20240916.9.1
title: Acidovorax radicis Li et al. 2011

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2906.20241212.9.2
title: Alicycliphilus denitrificans Mechichi et al. 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2907.20241212.9.2
title: Alicycliphilus denitrificans Mechichi et al. 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2908.20241212.9.2
title: Brachymonas denitrificans Hiraishi et al. 1995

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2909.20241212.9.2
title: Brachymonas chironomi Halpern et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2918.20241212.9.2
title: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987 emend. Willems et al. 1991

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2921.20241212.9.2
title: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987 emend. Willems et al. 1991

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.xgktrq
title: Occurrence Download

description: A dataset containing 5556 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anthias anthias (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Material sample)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 5556 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009924-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive2923.20241212.9.2
title: Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987 emend. Willems et al. 1991

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2927.20241212.9.2
title: Comamonas terrigena (ex Hugh 1962) De Vos et al. 1985 emend. Willems et al. 1991 emend. Wauters et al. 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2929.20241212.9.2
title: Comamonas nitrativorans Etchebehere et al. 2001

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2930.20241212.9.2
title: Comamonas kerstersii Wauters et al. 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2931.20241212.9.2
title: Comamonas badia Tago and Yokota 2005

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2933.20241212.9.2
title: Comamonas thiooxydans Narayan et al. 2011

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.3eanf4
title: Occurrence Download

description: A dataset containing 24270 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Melilotus indicus (L.) All.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 24270 records from 494 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009925-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive2934.20241212.9.2
title: Comamonas koreensis Chang et al. 2002

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2935.20241212.9.2
title: Comamonas granuli Kim et al. 2011

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2937.20241212.9.2
title: Comamonas composti Young et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2939.20241212.9.2
title: Curvibacter delicatus (Leifson 1962) Ding and Yokota 2004

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2940.20241212.9.2
title: Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2941.20241212.9.2
title: Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2944.20241212.9.2
title: Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2945.20241212.9.2
title: Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2946.20241212.9.2
title: Delftia acidovorans (den Dooren de Jong 1926) Wen et al. 1999

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2949.20241212.9.2
title: Delftia sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2952.20241212.9.2
title: Delftia tsuruhatensis Shigematsu et al. 2003 emend. Jørgensen et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2954.20241212.9.2
title: Delftia lacustris Jørgensen et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2956.20241212.9.2
title: Diaphorobacter nitroreducens Khan and Hiraishi 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2957.20241212.9.2
title: Diaphorobacter oryzae Pham et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2963.20241212.9.2
title: Hydrogenophaga flava (Niklewski 1910) Willems et al. 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2965.20241212.9.2
title: Hydrogenophaga palleronii (Davis 1970) Willems et al. 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2966.20241212.9.2
title: Hydrogenophaga pseudoflava (Auling et al. 1978) Willems et al. 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2967.20241212.9.2
title: Hydrogenophaga pseudoflava (Auling et al. 1978) Willems et al. 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2968.20241212.9.2
title: Hydrogenophaga taeniospiralis (Lalucat et al. 1982) Willems et al. 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2969.20241212.9.2
title: Hydrogenophaga intermedia Contzen et al. 2001

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2973.20241212.9.2
title: Hylemonella gracilis (Canale-Parola et al. 1966) Spring et al. 2004

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.