cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.2gjghb
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Theloderma albopunctatum (Liu & Hu, 1962)"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0306046-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.137806
title: Ostracon hiératique Ifao - ODM 2954_nu_2006_02985

description: Référence : nu_2006_02985<br />Site : Deir el-Médina<br />Secteur : Grand puits<br />Type : photographie<br />
DOI: 10.15468/dl.nmha62
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Suzukia luchuensis Kudô"
 ]
}

 The dataset includes 145 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002955-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.137807
title: Ostracon hiératique Ifao - ODM 2942_nu_2006_02986

description: Référence : nu_2006_02986<br />Site : Deir el-Médina<br />Type : photographie<br />
DOI: 10.15468/dl.fw8825
title: Occurrence Download

description: A dataset containing 232 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-94.5780347999999975 38.9907658999999995, -94.5780347999999975 38.9944052099999965, -94.5780347999999975 39.0000916400000008, -94.5780347999999975 39.0041858599999998, -94.5780347999999975 39.0094173700000013, -94.5780347999999975 39.0135116000000011, -94.5744081299999948 39.0135116000000011, -94.5687427700000001 39.0135116000000011, -94.5635306399999962 39.0135116000000011, -94.5605846600000035 39.0135116000000011, -94.5567322100000069 39.0135116000000011, -94.5508394000000010 39.0135116000000011, -94.5508394000000010 39.0080526300000017, -94.5508394000000010 39.0041858599999998, -94.5508394000000010 39.0014563800000005, -94.5508394000000010 38.9978170700000035, -94.5508394000000010 38.9950875800000034, -94.5508394000000010 38.9907658999999995, -94.5549192999999946 38.9907658999999995, -94.5605846600000035 38.9907658999999995, -94.5667032399999954 38.9907658999999995, -94.5707823000000047 38.9907658999999995, -94.5757678100000021 38.9907658999999995, -94.5780347999999975 38.9907658999999995))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 232 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0153644-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.137808
title: Ostracon hiératique Ifao - ODM 3014_nu_2006_02987

description: Référence : nu_2006_02987<br />Site : Deir el-Médina<br />Secteur : Gournet Mouraï<br />Type : photographie<br />
DOI: 10.15468/dl.urnzq5
title: Occurrence Download

description: A dataset containing 4403 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lophius piscatorius Linnaeus, 1758"
 ]
}

 The dataset includes 4403 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036440-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.137809
title: Ostracon hiératique Ifao - ODM 2832_nu_2006_02988

description: Référence : nu_2006_02988<br />Site : Deir el-Médina<br />Secteur : Grand puits<br />Type : photographie<br />
DOI: 10.15468/dl.a2r9vz
title: Occurrence Download

description: A dataset containing 1744 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "TaxonKey is Achatina fulica Bowdich, 1822"
 ]
}

 The dataset includes 1744 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012263-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.137810
title: Ostracon hiératique Ifao - ODM 2927_nu_2006_02989

description: Référence : nu_2006_02989<br />Site : Deir el-Médina<br />Secteur : Grand puits<br />Type : photographie<br />
DOI: 10.15468/dl.xwrtds
title: Occurrence Download

description: A dataset containing 3601 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-93.3290303999999935 44.9013905999999992, -93.3290303999999935 44.9066662899999969, -93.3290303999999935 44.9095070400000012, -93.3290303999999935 44.9141740000000027, -93.3290303999999935 44.9176234899999969, -93.3290303999999935 44.9212758899999969, -93.3290303999999935 44.9245224699999994, -93.3290303999999935 44.9269573999999992, -93.3290303999999935 44.9306097999999992, -93.3241579200000047 44.9306097999999992, -93.3184733599999987 44.9306097999999992, -93.3123827600000055 44.9306097999999992, -93.3087284000000068 44.9306097999999992, -93.3087284000000068 44.9275661300000024, -93.3087284000000068 44.9224933599999972, -93.3087284000000068 44.9196525999999992, -93.3087284000000068 44.9151885599999972, -93.3087284000000068 44.9115361599999972, -93.3087284000000068 44.9091012199999966, -93.3087284000000068 44.9060575600000007, -93.3087284000000068 44.9013905999999992, -93.3119767200000041 44.9013905999999992, -93.3156310800000028 44.9013905999999992, -93.3211126199999939 44.9013905999999992, -93.3249699999999933 44.9013905999999992, -93.3290303999999935 44.9013905999999992))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 3601 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0152844-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmmn7a
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudeustrotia candidula (Denis & Schiffermüller), 1775",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 30 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0210645-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.137811
title: Ostracon hiératique Ifao - ODM 2972_nu_2006_02990

description: Référence : nu_2006_02990<br />Site : Deir el-Médina<br />Secteur : Grand puits<br />Type : photographie<br />
DOI: 10.15468/dl.dkqsjv
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Taraxacum macrochlamydeum Kovalevsk."
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007297-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ebrmr4
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Hernandia guianensis Aubl."
 ]
}

 The dataset includes 205 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0181215-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60952/eset-9747
title: Zmiany morfologiczne wątroby myszy wywołane wędrówką larw Trichinella spiralis (2)

description: Materiał zdjęciowy uzyskany w ramach badań, których celem było: zbadanie ultrastruktury transformującej komórki mięśniowej na skutek oddziaływania larw Trichinella spiralis na przestrzeni prawie całego okresu życia żywiciela (myszy szczepu BALB/c); opis relacji morfologicznej między komórką pielęgniarką a larwą włośnia krętego w różnym czasie od zarażenia organizmu żywicielskiego; przedstawienie zmian na poziomie rozdzielczości mikroskopu elektronowego, jakie zachodzą w narządach miąższowych, przez które migrują larwy Trichinella spiralis. Do badań użyto 90 immunokompetentnych myszy płci męskiej szczepu BALB/c w wieku 6 - 8 tygodni. Myszy zarażano doustnie różnymi ilościami larw włośnia krętego, a następnie w różnych okresach życia żywiciela pobierano wycinki tkankowe z wątroby, płuc, serca, przepony i mięśnia czterogłowego uda. Materiał tkankowy utrwalono w
roztworze będącym mieszaniną 2 % paraformaldehydu i 2,5% glutaraldehydu w 0,1 M buforze kakodylowym o pH 7,4. Zatopiony materiał biologiczny w żywicach cięto na skrawki
o grubości 5 μm i 50 nm, oglądano w mikroskopie świetlnym i mikroskopie elektronowym JEM 1200 EX, a następnie wykonano mikrografie elektronowe na płytkach TM – 6. Na zdjęciu zmiany morfologiczne wątroby myszy wywołane wędrówką larw Trichinella spiralis. W naczyniach zatokowych obserwuje się liczne monocyty (Mn), komórki Browicz-Kupfera (BK) oraz granulocyty (G). Komórki miąższu wątrobowego mają zróżnicowaną budowę. Powiększenie 4 000 x.
DOI: 10.5281/zenodo.17106822
title: MetalCytoToxDB: a dataset of transition metal complexes cytotoxicities against various cell lines

description: MetalCytoToxDB contains 26500 experimentally measured cytotoxicity values of 7050 unique Ru, Ir, Rh, Re and Os complexes against 754 cell lines reported in the 1921 literature papers from 2001 to 2025.

The 24 columns of this dataset are explained as follows:



SMILES_Ligands — SMILES representation of ligands coordinated to ruthenium ion

Counterion — SMILES representation of the counterion(s) (if the complex molecule is charged)

Abbreviation_in_the_article — the original abbreviation depicting the complex in the article

IC50_Dark(M*10^-6) — value of IC50 originally presented in the article

IC50_Dark_standard_error(M*10^-6) — standard error of IC50 originally presented in the article

IC50_Dark_value — value of IC50 presented as a number (for machine learning purposes)

IC50_Light(M*10^-6) — value of IC50 under irradiation originally presented in the article

IC50_Light_standard_error(M*10^-6) — standard error of IC50 under irradiation originally presented in the article

IC50_Light_value — value of IC50 under irradiation presented as a number (for machine learning purposes)

Excitation_Wavelength(nm) — excitation wavelength related to IC50Light values

Irradiation_Time(minutes) — irradiation time related to IC50Light values

Irradiation_Power(W*m^-2) — power of light source related to IC50Light values

Cell_line — cell line (HeLa, A549, etc.)

Time(h) — time of exposure of the complexes to the cell line

DOI — DOI of a data source for given values

Year — year of a data source for given values

IC50_Cisplatin(M*10^-6) — value of cisplatin IC50 originally presented in the article

IC50_Cisplatin_standard_error(M*10^-6) — standard error of cisplatin IC50 originally presented in the article

IC50_Cisplatin_value — value of  cisplatin IC50 presented as a number (for machine learning purposes)

Charge_complex — total charge of the isolated complex molecule

Metal — the element representing the central atom of the complex

Oxidation_state — the formal oxidation state of the central atom

Atomic_number — the atomic number of the central atom

Valence_e — the total number of valence electrons of the central atom in its (0) oxidation state
DOI: 10.15468/dl.q34m66
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pityrogramma calomelanos",
 "Country is Mozambique",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055905-250827131500795/datasets/export for details.
DOI: 10.15468/dl.qk7vxp
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pityrogramma calomelanos",
 "Country is Palau",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055906-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5p68wd
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-4.09812 40.70919,-2.82754 40.70919,-2.82754 41.21717,-4.09812 41.21717,-4.09812 40.70919))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phengaris nausithous"
 ]
}

 The dataset includes 63 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055907-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jf5aq5
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pityrogramma calomelanos",
 "Country is Papua New Guinea",
 "HasCoordinate is true"
 ]
}

 The dataset includes 119 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055908-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15853577
title: MetalCytoToxDB: a dataset of transition metal complexes cytotoxicities against various cell lines

description: MetalCytoToxDB contains 26500 experimentally measured cytotoxicity values of 7050 unique Ru, Ir, Rh, Re and Os complexes against 754 cell lines reported in the 1921 literature papers from 2001 to 2025.

The 24 columns of this dataset are explained as follows:



SMILES_Ligands — SMILES representation of ligands coordinated to ruthenium ion

Counterion — SMILES representation of the counterion(s) (if the complex molecule is charged)

Abbreviation_in_the_article — the original abbreviation depicting the complex in the article

IC50_Dark(M*10^-6) — value of IC50 originally presented in the article

IC50_Dark_standard_error(M*10^-6) — standard error of IC50 originally presented in the article

IC50_Dark_value — value of IC50 presented as a number (for machine learning purposes)

IC50_Light(M*10^-6) — value of IC50 under irradiation originally presented in the article

IC50_Light_standard_error(M*10^-6) — standard error of IC50 under irradiation originally presented in the article

IC50_Light_value — value of IC50 under irradiation presented as a number (for machine learning purposes)

Excitation_Wavelength(nm) — excitation wavelength related to IC50Light values

Irradiation_Time(minutes) — irradiation time related to IC50Light values

Irradiation_Power(W*m^-2) — power of light source related to IC50Light values

Cell_line — cell line (HeLa, A549, etc.)

Time(h) — time of exposure of the complexes to the cell line

DOI — DOI of a data source for given values

Year — year of a data source for given values

IC50_Cisplatin(M*10^-6) — value of cisplatin IC50 originally presented in the article

IC50_Cisplatin_standard_error(M*10^-6) — standard error of cisplatin IC50 originally presented in the article

IC50_Cisplatin_value — value of  cisplatin IC50 presented as a number (for machine learning purposes)

Charge_complex — total charge of the isolated complex molecule

Metal — the element representing the central atom of the complex

Oxidation_state — the formal oxidation state of the central atom

Atomic_number — the atomic number of the central atom

Valence_e — the total number of valence electrons of the central atom in its (0) oxidation state
DOI: 10.5281/zenodo.17093990
title: Hyperboost In-situ data

description: This is an in situ dataset of bio-optical and biogeochemical variables resulting from the HyperBOOST project on board of TARA oceans, during the TREC project.
DOI: 10.5281/zenodo.17106770
title: Table 1 in Two new species of Rineloricaria (Siluriformes: Loricariidae) from the rio Iguaçu basin, southern Brazil

description: Table 1. Morphometric data of Rineloricaria langei from upper rio Iguaçu. N = sample size; SD = Standard deviation. Range includes holotype.
VariableNHolotypeLowHighMeanSDStandard length (mm)20114.951.7116.590.916.0Percents of standard lengthHead length2020.718.921.019.90.7Predorsal length2029.927.131.228.91.2Dorsal-spine length2020.118.322.219.91.0Anal-spine length1716.414.719.116.01.1Pectoral-spine length2015.813.816.114.90.6Pelvic spine length2013.612.214.113.20.6Dorsal caudal-spine length1814.312.115.113.80.9Ventral caudal-spine length12-10.113.912.10.9Thoracic length2013.211.814.113.00.7Abdominal length2015.313.116.014.70.8Cleithral width2015.713.015.714.10.7Body depth at dorsal-fin origin209.76.69.78.00.7Body width at anal-fin origin2010.47.410.49.10.7Postanal length2057.455.561.458.71.7Percents of head lengthSnout length2049.545.149.547.31.1Orbital diameter2022.421.125.423.01.3Interorbital width2021.819.724.021.51.0Head depth2043.237.343.239.61.4Premaxillary ramus207.66.18.27.10.6Maxillary-barbel length1910.17.913.610.31.3
description: Published as part of Ingenito, Leonardo F. S., Ghazzi, Miriam S., Duboc, Luiz F. & Abilhoa, Vinícius, 2008, Neotropical Ichthyology 6 (3) on page 355, DOI: 10.1590/S1679-62252008000300009, http://zenodo.org/record/5419780
DOI: 10.5281/zenodo.17106771
title: Table 1 in Two new species of Rineloricaria (Siluriformes: Loricariidae) from the rio Iguaçu basin, southern Brazil

description: Table 1. Morphometric data of Rineloricaria langei from upper rio Iguaçu. N = sample size; SD = Standard deviation. Range includes holotype.
VariableNHolotypeLowHighMeanSDStandard length (mm)20114.951.7116.590.916.0Percents of standard lengthHead length2020.718.921.019.90.7Predorsal length2029.927.131.228.91.2Dorsal-spine length2020.118.322.219.91.0Anal-spine length1716.414.719.116.01.1Pectoral-spine length2015.813.816.114.90.6Pelvic spine length2013.612.214.113.20.6Dorsal caudal-spine length1814.312.115.113.80.9Ventral caudal-spine length12-10.113.912.10.9Thoracic length2013.211.814.113.00.7Abdominal length2015.313.116.014.70.8Cleithral width2015.713.015.714.10.7Body depth at dorsal-fin origin209.76.69.78.00.7Body width at anal-fin origin2010.47.410.49.10.7Postanal length2057.455.561.458.71.7Percents of head lengthSnout length2049.545.149.547.31.1Orbital diameter2022.421.125.423.01.3Interorbital width2021.819.724.021.51.0Head depth2043.237.343.239.61.4Premaxillary ramus207.66.18.27.10.6Maxillary-barbel length1910.17.913.610.31.3
description: Published as part of Ingenito, Leonardo F. S., Ghazzi, Miriam S., Duboc, Luiz F. & Abilhoa, Vinícius, 2008, Neotropical Ichthyology 6 (3) on page 355, DOI: 10.1590/S1679-62252008000300009, http://zenodo.org/record/5419780
DOI: 10.5281/zenodo.17106774
title: Table 2 in Two new species of Rineloricaria (Siluriformes: Loricariidae) from the rio Iguaçu basin, southern Brazil

description: Table 2. Morphometric data of Rineloricaria maacki from middle and lower rio Iguaçu. N = sample size; SD = Standard deviation. Range includes the holotype.
VariableNHolotypeLowHighMeanSDStandard length (mm)9108.479.7136.2115.017.6Percents of standard lengthHead length926.023.126.024.21.1Predorsal length936.232.637.434.81.5Dorsal spine length919.419.021.020.00.7Anal spine length915.113.916.815.51.0Pectoral spine length917.214.819.017.51.3Pelvic spine length914.313.516.214.70.8Upper caudal spine length914.713.917.215.51.1Lower caudal spine length911.711.013.812.20.8Thoracic length916.513.216.915.41.3Abdominal length917.615.618.216.80.9Cleithral width920.618.820.920.00.7Body depth at dorsal-fin origin99.49.413.010.71.2Body width at anal-fin origin912.111.312.612.00.4Postanal length950.250.254.051.81.3Percents of head lengthSnout length946.946.952.249.61.4Orbital diameter921.119.421.921.00.7Interorbital width923.023.026.024.30.9Head depth935.535.543.940.02.7Premaxillary ramus96.76.37.77.00.5Maxillary barbel length94.03.47.04.51.2
description: Published as part of Ingenito, Leonardo F. S., Ghazzi, Miriam S., Duboc, Luiz F. & Abilhoa, Vinícius, 2008, Neotropical Ichthyology 6 (3) on page 355, DOI: 10.1590/S1679-62252008000300009, http://zenodo.org/record/5419780
DOI: 10.5281/zenodo.17106775
title: Table 2 in Two new species of Rineloricaria (Siluriformes: Loricariidae) from the rio Iguaçu basin, southern Brazil

description: Table 2. Morphometric data of Rineloricaria maacki from middle and lower rio Iguaçu. N = sample size; SD = Standard deviation. Range includes the holotype.
VariableNHolotypeLowHighMeanSDStandard length (mm)9108.479.7136.2115.017.6Percents of standard lengthHead length926.023.126.024.21.1Predorsal length936.232.637.434.81.5Dorsal spine length919.419.021.020.00.7Anal spine length915.113.916.815.51.0Pectoral spine length917.214.819.017.51.3Pelvic spine length914.313.516.214.70.8Upper caudal spine length914.713.917.215.51.1Lower caudal spine length911.711.013.812.20.8Thoracic length916.513.216.915.41.3Abdominal length917.615.618.216.80.9Cleithral width920.618.820.920.00.7Body depth at dorsal-fin origin99.49.413.010.71.2Body width at anal-fin origin912.111.312.612.00.4Postanal length950.250.254.051.81.3Percents of head lengthSnout length946.946.952.249.61.4Orbital diameter921.119.421.921.00.7Interorbital width923.023.026.024.30.9Head depth935.535.543.940.02.7Premaxillary ramus96.76.37.77.00.5Maxillary barbel length94.03.47.04.51.2
description: Published as part of Ingenito, Leonardo F. S., Ghazzi, Miriam S., Duboc, Luiz F. & Abilhoa, Vinícius, 2008, Neotropical Ichthyology 6 (3) on page 355, DOI: 10.1590/S1679-62252008000300009, http://zenodo.org/record/5419780
DOI: 10.5281/zenodo.15355985
title: Data and R code used in Barry, Hennecke et al. "Rooting for function: Community-level fine-root traits relate to many ecosystem functions"

description:  

This upload contain the following files:



Predictions.csv: Hypotheses for the trait-functioning relationships to colour code in figures.

RCode.R:  R markdown file that includes the code for statistical analyses and plotting.

Species_data.csv: Dataset with plant species abundance and mean trait values from the gRooT database and additional data from Weigelt et al. (2021, New Phytologist).

Functions.R: Functions for plotting to be used in R.

Functions_data.csv: Dataset with ecosystem functioning data.

Graphing_variables.csv: Settings for plotting to be used in R.

Metadata.txt: Metdadata file for the datasets 'Function_data.csv' and 'Species_data.csv'.