cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11846586.v1
title: Additional file 4 of Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis

description: Additional file 4: Supplementary Data 2. [SuppData2.txt] Text file of 187 known and novel lncRNA transcript contigs, in FASTA format. The 147 novel contigs have no known orthologs (by BLASTn), very low coding potential scores (CPAT q
DOI: 10.6084/m9.figshare.11846577
title: Additional file 3 of Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis

description: Additional file 3: Supplementary Data 1. [SuppData1.txt] Text file of 9528 potential lncRNA transcript contigs, in FASTA format. These contigs have no known orthologs (by BLASTn) and low coding potential scores (CPAT p
DOI: 10.6084/m9.figshare.11846577.v1
title: Additional file 3 of Pan-tissue transcriptome analysis of long noncoding RNAs in the American beaver Castor canadensis

description: Additional file 3: Supplementary Data 1. [SuppData1.txt] Text file of 9528 potential lncRNA transcript contigs, in FASTA format. These contigs have no known orthologs (by BLASTn) and low coding potential scores (CPAT p
DOI: 10.6084/m9.figshare.11846550
title: Additional file 2 of Inhibition of methyltransferase activity of enhancer of zeste 2 leads to enhanced lipid accumulation and altered chromatin status in zebrafish

description: Additional file 2. A Microsoft Excel spreadsheet that contains Gene Ontology terms for Tab 1. Biological function Tab 2. cellular function, and Tab 3. molecular function.
DOI: 10.6084/m9.figshare.11846550.v1
title: Additional file 2 of Inhibition of methyltransferase activity of enhancer of zeste 2 leads to enhanced lipid accumulation and altered chromatin status in zebrafish

description: Additional file 2. A Microsoft Excel spreadsheet that contains Gene Ontology terms for Tab 1. Biological function Tab 2. cellular function, and Tab 3. molecular function.
DOI: 10.6084/m9.figshare.11846529
title: Additional file 8 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: List of selection signatures detected from the HSR / LSR lines
DOI: 10.6084/m9.figshare.11846535
title: Additional file 9 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Statistics from photoperiod differential expression study
DOI: 10.6084/m9.figshare.11846535.v1
title: Additional file 9 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Statistics from photoperiod differential expression study
DOI: 10.6084/m9.figshare.11846523
title: Additional file 7 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: A comparative summary of assembled ERVs in quail, chicken and turkey
DOI: 10.6084/m9.figshare.11846529.v1
title: Additional file 8 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: List of selection signatures detected from the HSR / LSR lines
DOI: 10.6084/m9.figshare.11846523.v1
title: Additional file 7 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: A comparative summary of assembled ERVs in quail, chicken and turkey
DOI: 10.6084/m9.figshare.11846517
title: Additional file 6 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: BED file containing location of ERVs in turkey genome
DOI: 10.6084/m9.figshare.11846511
title: Additional file 5 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: BED file containing location of ERVs in quail genome
DOI: 10.6084/m9.figshare.11846511.v1
title: Additional file 5 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: BED file containing location of ERVs in quail genome
DOI: 10.6084/m9.figshare.11846517.v1
title: Additional file 6 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: BED file containing location of ERVs in turkey genome
DOI: 10.6084/m9.figshare.11846505
title: Additional file 4 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Percent of quail genes with orthologs identified in related bird genomes
DOI: 10.6084/m9.figshare.11846499
title: Additional file 3 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Location of breakpoints between chicken and quail chromosomes
DOI: 10.6084/m9.figshare.11846505.v1
title: Additional file 4 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Percent of quail genes with orthologs identified in related bird genomes
DOI: 10.6084/m9.figshare.11846499.v1
title: Additional file 3 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Location of breakpoints between chicken and quail chromosomes
DOI: 10.6084/m9.figshare.11846487
title: Additional file 1 of The wild species genome ancestry of domestic chickens

description: Additional file 1: Table S1: Sampling, mapping and variants statistics. HomAA and HetRA are the proportion of homozygous and heterozygous SNPs to the reference (Galgal5.0), respectively.
DOI: 10.6084/m9.figshare.11846484
title: Additional file 1 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: List of unannotated quail genes and their manual annotation
DOI: 10.6084/m9.figshare.11846487.v1
title: Additional file 1 of The wild species genome ancestry of domestic chickens

description: Additional file 1: Table S1: Sampling, mapping and variants statistics. HomAA and HetRA are the proportion of homozygous and heterozygous SNPs to the reference (Galgal5.0), respectively.
DOI: 10.6084/m9.figshare.11846484.v1
title: Additional file 1 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: List of unannotated quail genes and their manual annotation
DOI: 10.6084/m9.figshare.11846475
title: Additional file 16 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Viral read presence in quail samples
DOI: 10.6084/m9.figshare.11846475.v1
title: Additional file 16 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Viral read presence in quail samples
DOI: 10.6084/m9.figshare.11846466
title: Additional file 15 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Regulation of IFITM, MHC and TLR family genes in quail, chicken and duck following HPAI and LPAI infection
DOI: 10.6084/m9.figshare.11846466.v1
title: Additional file 15 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Regulation of IFITM, MHC and TLR family genes in quail, chicken and duck following HPAI and LPAI infection
DOI: 10.6084/m9.figshare.11846454
title: Additional file 14 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: List of the cluster of genes upregulated in duck at day 1 during HPAI infection, with the corresponding fold changes in each species. NS = Not significantly differentially regulated
DOI: 10.6084/m9.figshare.11846454.v1
title: Additional file 14 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: List of the cluster of genes upregulated in duck at day 1 during HPAI infection, with the corresponding fold changes in each species. NS = Not significantly differentially regulated
DOI: 10.6084/m9.figshare.11846442
title: Additional file 13 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Overrepresented GO terms in differentially expressed genes in infection study
DOI: 10.6084/m9.figshare.11846442.v1
title: Additional file 13 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Overrepresented GO terms in differentially expressed genes in infection study
DOI: 10.6084/m9.figshare.11846433
title: Additional file 12 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: List of differentially expressed genes, FDR 1.6 in infection study
DOI: 10.6084/m9.figshare.11846433.v1
title: Additional file 12 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: List of differentially expressed genes, FDR 1.6 in infection study
DOI: 10.6084/m9.figshare.11846421
title: Additional file 11 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Sequences of cathelicidins and defensin genes identified in quail genome
DOI: 10.6084/m9.figshare.11846427
title: Additional file 1 of Multi-kingdom characterization of the core equine fecal microbiota based on multiple equine (sub)species

description: Additional file 1: Table S1. Details of the animals used in the study.
DOI: 10.6084/m9.figshare.11846421.v1
title: Additional file 11 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Sequences of cathelicidins and defensin genes identified in quail genome
DOI: 10.6084/m9.figshare.11846427.v1
title: Additional file 1 of Multi-kingdom characterization of the core equine fecal microbiota based on multiple equine (sub)species

description: Additional file 1: Table S1. Details of the animals used in the study.
DOI: 10.6084/m9.figshare.11846415
title: Additional file 10 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Pathway analysis from photoperiod study
DOI: 10.6084/m9.figshare.11846415.v1
title: Additional file 10 of The quail genome: insights into social behaviour, seasonal biology and infectious disease response

description: Pathway analysis from photoperiod study
DOI: 10.6084/m9.figshare.11846394
title: Additional file 1 of Unmasking Retinitis Pigmentosa complex cases by a whole genome sequencing algorithm based on open-access tools: hidden recessive inheritance and potential oligogenic variants

description: Additional file 1: Table S1. List of genes associated with IRD according to Retinal Information Network [5]. This list of 274 genes was used in the prioritization of variants during the application of the “IRD genes filtering”.
DOI: 10.6084/m9.figshare.11846394.v1
title: Additional file 1 of Unmasking Retinitis Pigmentosa complex cases by a whole genome sequencing algorithm based on open-access tools: hidden recessive inheritance and potential oligogenic variants

description: Additional file 1: Table S1. List of genes associated with IRD according to Retinal Information Network [5]. This list of 274 genes was used in the prioritization of variants during the application of the “IRD genes filtering”.
DOI: 10.6084/m9.figshare.11846241
title: Additional file 1 of Potential biomarkers of ductal carcinoma in situ progression

description: Additional file 1: Table S1. Comparison between control and pure invasive ductal carcinoma. Differentially expressed genes are in bold. Table S2. Comparison between control and pure ductal carcinoma in situ. Differentially expressed genes are in bold. Table S3. Comparison between pure carcinoma ductal in situ and pure invasive ductal carcinoma. Differentially expressed genes are in bold. Table S4. Comparison between invasive ductal carcinoma of mixed lesions and pure invasive ductal carcinoma. Differentially expressed genes are in bold. Table S5. Comparison between ductal carcinoma in situ of mixed lesions and pure invasive ductal carcinoma. Differentially expressed genes are in bold. Table S6. Comparison between pure ductal carcinoma in situ and ductal carcinoma in situ of mixed lesions. Differentially expressed genes are in bold. Table S7. Comparison between pure ductal carcinoma in situ and invasive ductal carcinoma of mixed lesions. Differentially expressed genes are in bold. Table S8. Comparison between control and ductal carcinoma in situ of mixed lesions. Differentially expressed genes are in bold. Table S9. Comparison between pure ductal carcinoma in situ of mixed lesions and invasive ductal carcinoma of mixed lesions. Differentially expressed genes are in bold. Table S10. Comparison between control and invasive ductal carcinoma of mixed lesions. Differentially expressed genes are in bold. Table S11. Comparison between noninvasive and invasive groups. Differentially expressed genes are in bold.
DOI: 10.6084/m9.figshare.11846241.v1
title: Additional file 1 of Potential biomarkers of ductal carcinoma in situ progression

description: Additional file 1: Table S1. Comparison between control and pure invasive ductal carcinoma. Differentially expressed genes are in bold. Table S2. Comparison between control and pure ductal carcinoma in situ. Differentially expressed genes are in bold. Table S3. Comparison between pure carcinoma ductal in situ and pure invasive ductal carcinoma. Differentially expressed genes are in bold. Table S4. Comparison between invasive ductal carcinoma of mixed lesions and pure invasive ductal carcinoma. Differentially expressed genes are in bold. Table S5. Comparison between ductal carcinoma in situ of mixed lesions and pure invasive ductal carcinoma. Differentially expressed genes are in bold. Table S6. Comparison between pure ductal carcinoma in situ and ductal carcinoma in situ of mixed lesions. Differentially expressed genes are in bold. Table S7. Comparison between pure ductal carcinoma in situ and invasive ductal carcinoma of mixed lesions. Differentially expressed genes are in bold. Table S8. Comparison between control and ductal carcinoma in situ of mixed lesions. Differentially expressed genes are in bold. Table S9. Comparison between pure ductal carcinoma in situ of mixed lesions and invasive ductal carcinoma of mixed lesions. Differentially expressed genes are in bold. Table S10. Comparison between control and invasive ductal carcinoma of mixed lesions. Differentially expressed genes are in bold. Table S11. Comparison between noninvasive and invasive groups. Differentially expressed genes are in bold.
DOI: 10.6084/m9.figshare.11846121
title: Additional file 1 of Identifying the pulsed neuron networksâ€™ structures by a nonlinear Granger causality method

description: Additional file 1. The matlab subroutine to simulate the SNN model in Fig. 1.
DOI: 10.6084/m9.figshare.11846124
title: Additional file 2 of Identifying the pulsed neuron networksâ€™ structures by a nonlinear Granger causality method

description: Additional file 2. The main matlab program for generate the data in Fig. 1.
DOI: 10.6084/m9.figshare.11846121.v1
title: Additional file 1 of Identifying the pulsed neuron networksâ€™ structures by a nonlinear Granger causality method

description: Additional file 1. The matlab subroutine to simulate the SNN model in Fig. 1.
DOI: 10.6084/m9.figshare.11846124.v1
title: Additional file 2 of Identifying the pulsed neuron networksâ€™ structures by a nonlinear Granger causality method

description: Additional file 2. The main matlab program for generate the data in Fig. 1.
DOI: 10.6084/m9.figshare.11846103
title: Energy-efficient multi-task manufacturing scheduling with intermediate buffers using a three-stage genetic algorithm

description: This is the experimental data and code of the manuscript entitled "Energy-efficient multi-task manufacturing scheduling with intermediate buffers using a three-stage genetic algorithm". All data are generated through computer simulation and saved in the file with csv format. The data are the simulation of the real-world case. There are five instances for these experiments, which cover multiple scales. Three attributes including time, energy and quality of services for achieving corresponding subtasks are shown in datasets.
DOI: 10.6084/m9.figshare.11846103.v1
title: Energy-efficient multi-task manufacturing scheduling with intermediate buffers using a three-stage genetic algorithm

description: This is the experimental data and code of the manuscript entitled "Energy-efficient multi-task manufacturing scheduling with intermediate buffers using a three-stage genetic algorithm". All data are generated through computer simulation and saved in the file with csv format. The data are the simulation of the real-world case. There are five instances for these experiments, which cover multiple scales. Three attributes including time, energy and quality of services for achieving corresponding subtasks are shown in datasets.
DOI: 10.6084/m9.figshare.11846055
title: Preventing clinically relevant pancreatic fistula with combination of linear stapling plus continuous suture of the stump in laparoscopic distal pancreatectomy

description: Preventing clinically relevant pancreatic fistula with combination of linear stapling plus continuous suture of the stump in laparoscopic distal pancreatectomy
DOI: 10.6084/m9.figshare.11845611
title: Raw data for analyses shown in Fig 2 to Fig 4 of the manuscript

description: Raw data for analyses shown in Fig 2 to Fig 4 of the manuscript
DOI: 10.6084/m9.figshare.11845611.v1
title: Raw data for analyses shown in Fig 2 to Fig 4 of the manuscript

description: Raw data for analyses shown in Fig 2 to Fig 4 of the manuscript
DOI: 10.6084/m9.figshare.11846055.v1
title: Preventing clinically relevant pancreatic fistula with combination of linear stapling plus continuous suture of the stump in laparoscopic distal pancreatectomy

description: Preventing clinically relevant pancreatic fistula with combination of linear stapling plus continuous suture of the stump in laparoscopic distal pancreatectomy
DOI: 10.6084/m9.figshare.11845551
title: Simulated zero-crossing wave period (3-hourly, 150a) from FIO-ESM v2.0 1pctCO2 experiment r1i1p1f1

description: Simulated zero-crossing wave period (3-hourly, 150a) from FIO-ESM v2.0 1pctCO2 experiment (CO2 prescribed to increase at 1% per year) r1i1p1f1, which is branch from Jan 1, 301 of piControl experiment. The grid, named gx1v6, is the displaced pole (the North Pole displaced to the Greenland) grid with 1.1 degree in longitude and 0.27-0.54 degree in latitude.
DOI: 10.6084/m9.figshare.11845560
title: Row Data_survival (fish) of gurami sago_12 Feb 2020.doc

description: Row data of gurami sago survival (fish)<br>
DOI: 10.6084/m9.figshare.11845560.v1
title: Row Data_survival (fish) of gurami sago_12 Feb 2020.doc

description: Row data of gurami sago survival (fish)<br>
DOI: 10.6084/m9.figshare.11845548
title: Development of a clinical risk score for incident diabetes: A 10-year prospective cohort study

description: Supplementary Tables
DOI: 10.6084/m9.figshare.11845527
title: Supplementary Table 2 from Nutritional regulation of glucose metabolism-related genes in the emerging teleost model Mexican tetra surface fish: a first exploration

description: Raw data used in the present study
DOI: 10.6084/m9.figshare.11845548.v1
title: Development of a clinical risk score for incident diabetes: A 10-year prospective cohort study

description: Supplementary Tables
DOI: 10.6084/m9.figshare.11845521
title: Table S1 from Reactivity, fate and functional roles of dissolved organic matter in anoxic inland waters

description: Literature data Figure 1
DOI: 10.6084/m9.figshare.11845527.v2
title: Supplementary Table 2 from Nutritional regulation of glucose metabolism-related genes in the emerging teleost model Mexican tetra surface fish: a first exploration

description: Raw data used in the present study
DOI: 10.6084/m9.figshare.11845521.v1
title: Table S1 from Reactivity, fate and functional roles of dissolved organic matter in anoxic inland waters

description: Literature data Figure 1
DOI: 10.6084/m9.figshare.11845527.v1
title: Supplementary Table 1 from Nutritional regulation of glucose metabolism-related genes in the emerging teleost model Mexican tetra surface fish: a first exploration

description: Primers sequences used in the present study.
DOI: 10.6084/m9.figshare.11845347
title: Avanzi et al. - Heredity - Datasets

description: These data were used in the paper:<br>Avanzi C, Heer K, Buentgen U, Labriola M, Leonardi S, Opgenoorth L, Piermattei A, Urbinati C, Vendramin GG, Piotti A (-) Individual reproductive success in Norway spruce natural populations depends on growth rate, age and sensitivity to temperature but not on drought responses. Heredity, <i>in press</i><i><br></i>----<br>Sheet1: Nuclear SSRsSheet2: Chloroplast SSRsSheet3: Individual spatial positions (UTM)Sheet4: Dendrophenotypes
DOI: 10.6084/m9.figshare.11845347.v1
title: Avanzi et al. - Heredity - Datasets

description: These data were used in the paper:<br>Avanzi C, Heer K, Buentgen U, Labriola M, Leonardi S, Opgenoorth L, Piermattei A, Urbinati C, Vendramin GG, Piotti A (-) Individual reproductive success in Norway spruce natural populations depends on growth rate, age and sensitivity to temperature but not on drought responses. Heredity, <i>under review</i><i><br></i>----<br>Sheet1: Nuclear SSRsSheet2: Chloroplast SSRsSheet3: Individual spatial positions (UTM)Sheet4: Dendrophenotypes
DOI: 10.26180/5e449889f25d0
title: Ant tracheal measurements by synchrotron tomography

description: Data for ant abdominal tracheal radii from Levels 1 (closest to spiracle) to level 3. Code for the analysis also provided as used in the R package. The data all used for this work:<br>Tracheal branching in ants is area-decreasing, violating a central assumption of network transport models Ian J. Aitkenhead, Grant A. Duffy, Citsabehsan Devendran, Michael R. Kearney, Adrian Neild and Steven L. Chown<br>
DOI: 10.18112/openneuro.ds002799.v1.0.3
title: Human es-fMRI Resource: Concurrent deep-brain stimulation and whole-brain functional MRI
DOI: 10.6084/m9.figshare.11845233
title: USA tap water O-isotope map

description: Modeled <sup>18</sup>O/<sup>16</sup>O ratios of tap waters across the contiguous USA. Developed on 2020-02-12 using the methods of Bowen, et al. (2007) and 1) precipitation isotope ratio maps from http://waterisotopes.org (OIPC v.3.1), and 2) CONUS tap water isotope measurements from Waterisotopes Database (2020).<br>data_sources.csv: provenance and citation information for tap water data used in the analysis<br>200212_tap.tif: 2-band GeoTiff raster. Layer 1: mean predicted tap water d<sup>18</sup>O. Layer 2: 1 standard deviation value for prediction.<br>200212_usTap_4class.png: Reclassified image showing mean predictions.<br><br>Bowen, G. J., Ehleringer, J. R., Chesson, L. A., Stange, E., and Cerling, T. E. ( 2007), Stable isotope ratios of tap water in the contiguous United States, <i>Water Resour. Res.</i>, 43, W03419, doi:10.1029/2006WR005186.<br><br>Waterisotopes Database (2020) http://waterisotopesDB.org. Accessed 2/12/2020. Query: minLat = 20, maxLat = 55, minLong = -130, maxLong = -60, Type=Tap
DOI: 10.6084/m9.figshare.11845155.v1
title: Electron Diffusion Coefficients due to Whistle Mode Chorus Waves Using Non-Dipolar Magnetic Field in Jupiter’s Magnetosphere

description: This is the dataset created for the paper 'Electron Diffusion Coefficients due to Whistle Mode Chorus Waves Using Non-Dipolar Magnetic Field in Jupiter’s Magnetosphere'.
DOI: 10.6084/m9.figshare.11845155.v3
title: Energetic Electron Scattering due to Whistler Mode Chorus Waves Using Realistic Magnetic Field and Density Models in Jupiter’s Magnetosphere

description: This is the dataset created for the JGR paper 'Energetic Electron Scattering due to Whistler Mode Chorus Waves Using Realistic Magnetic Field and Density Models in Jupiter’s Magnetosphere'.