cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11497320
title: MOESM8 of The pathogen Moniliophthora perniciosa promotes differential proteomic modulation of cacao genotypes with contrasting resistance to witches´ broom disease

description: Additional file 8. Complete list of orthologous proteins subjected to PPI analysis.
DOI: 10.6084/m9.figshare.11497323.v1
title: MOESM5 of A detailed in silico analysis of secondary metabolite biosynthesis clusters in the genome of the broad host range plant pathogenic fungus Sclerotinia sclerotiorum

description: Additional file 5: Table S4. Results from MultiGeneBlast analysis.
DOI: 10.6084/m9.figshare.11497317
title: MOESM4 of A detailed in silico analysis of secondary metabolite biosynthesis clusters in the genome of the broad host range plant pathogenic fungus Sclerotinia sclerotiorum

description: Additional file 4: Table S3. BGC cluster domains, expressions profiles and homology.
DOI: 10.6084/m9.figshare.11497317.v1
title: MOESM4 of A detailed in silico analysis of secondary metabolite biosynthesis clusters in the genome of the broad host range plant pathogenic fungus Sclerotinia sclerotiorum

description: Additional file 4: Table S3. BGC cluster domains, expressions profiles and homology.
DOI: 10.6084/m9.figshare.11497320.v1
title: MOESM8 of The pathogen Moniliophthora perniciosa promotes differential proteomic modulation of cacao genotypes with contrasting resistance to witches´ broom disease

description: Additional file 8. Complete list of orthologous proteins subjected to PPI analysis.
DOI: 10.6084/m9.figshare.11497308
title: MOESM3 of A detailed in silico analysis of secondary metabolite biosynthesis clusters in the genome of the broad host range plant pathogenic fungus Sclerotinia sclerotiorum

description: Additional file 3: Table S2. FunGeneClusterS results.
DOI: 10.6084/m9.figshare.11497308.v1
title: MOESM3 of A detailed in silico analysis of secondary metabolite biosynthesis clusters in the genome of the broad host range plant pathogenic fungus Sclerotinia sclerotiorum

description: Additional file 3: Table S2. FunGeneClusterS results.
DOI: 10.6084/m9.figshare.11497302
title: MOESM2 of A detailed in silico analysis of secondary metabolite biosynthesis clusters in the genome of the broad host range plant pathogenic fungus Sclerotinia sclerotiorum

description: Additional file 2: Table S1. SMURF and antiSMASH predicted cluster and backbone genes, and key biosynthetic genes.
DOI: 10.6084/m9.figshare.11497302.v1
title: MOESM2 of A detailed in silico analysis of secondary metabolite biosynthesis clusters in the genome of the broad host range plant pathogenic fungus Sclerotinia sclerotiorum

description: Additional file 2: Table S1. SMURF and antiSMASH predicted cluster and backbone genes, and key biosynthetic genes.
DOI: 10.6084/m9.figshare.11497296
title: MOESM5 of The pathogen Moniliophthora perniciosa promotes differential proteomic modulation of cacao genotypes with contrasting resistance to witches´ broom disease

description: Additional file 5. List of complete differentially Expressed Proteins identified in Catongo.
DOI: 10.6084/m9.figshare.11497296.v1
title: MOESM5 of The pathogen Moniliophthora perniciosa promotes differential proteomic modulation of cacao genotypes with contrasting resistance to witches´ broom disease

description: Additional file 5. List of complete differentially Expressed Proteins identified in Catongo.
DOI: 10.6084/m9.figshare.11497290
title: MOESM4 of The pathogen Moniliophthora perniciosa promotes differential proteomic modulation of cacao genotypes with contrasting resistance to witches´ broom disease

description: Additional file 4. List of complete differentially Expressed Proteins identified in TSH1188.
DOI: 10.6084/m9.figshare.11497290.v1
title: MOESM4 of The pathogen Moniliophthora perniciosa promotes differential proteomic modulation of cacao genotypes with contrasting resistance to witches´ broom disease

description: Additional file 4. List of complete differentially Expressed Proteins identified in TSH1188.
DOI: 10.6084/m9.figshare.11497284
title: MOESM2 of Drug-resistant enteric fever worldwide, 1990 to 2018: a systematic review and meta-analysis

description: Additional file 2. Data file S1: Individual study results for multidrug resistance. Data file S2: Individual study results for fluoroquinolone non-susceptibility. Data file S3: Indivual study results for ceftriaxone non-susceptibility.
DOI: 10.6084/m9.figshare.11497284.v1
title: MOESM2 of Drug-resistant enteric fever worldwide, 1990 to 2018: a systematic review and meta-analysis

description: Additional file 2. Data file S1: Individual study results for multidrug resistance. Data file S2: Individual study results for fluoroquinolone non-susceptibility. Data file S3: Indivual study results for ceftriaxone non-susceptibility.
DOI: 10.6084/m9.figshare.11497137
title: The data extracted from Sentinel plus, Taiwan

description: The data contains EV-like and ILI data from Sentinel plus, Taiwan.
DOI: 10.6084/m9.figshare.11497095
title: The coefficients of the predictors (year and rainfall) for flooding duration at the study sites

description: Supporting Information rainfall vs flooding duration<br>
DOI: 10.6084/m9.figshare.11497095.v2
title: The coefficients of the predictors (year and rainfall) for flooding duration at the study sites

description: Supporting Information rainfall vs flooding duration<br>
DOI: 10.6084/m9.figshare.11497095.v1
title: Supporting Information rainfall vs flooding duration

description: The coefficients of the predictors (year and rainfall) for flooding duration at the study sites. The last two columns show the significance of the model and the amount of variance they explain.
DOI: 10.6084/m9.figshare.11497077
title: Porewater sulfide vs. porewater salinity

description: Figure 8
DOI: 10.6084/m9.figshare.11497074
title: The behavior of porewater salinity during and after the restoration actions

description: Figure 7
DOI: 10.6084/m9.figshare.11497077.v1
title: Mangrove porewater sulfide and salinity

description: Porewater sulfide vs. porewater salinity in the minimum and maximum floods in the restored site 1-4, the undisturbed reference site and other impaired sites in Isla del Carmen, Campeche, Mexico and a conserved mangrove site in South Florida, USA
DOI: 10.6084/m9.figshare.11497077.v3
title: Porewater sulfide vs. porewater salinity

description: Figure 8
DOI: 10.6084/m9.figshare.11497077.v2
title: Mangrove porewater sulfide and salinity

description: Porewater sulfide vs. porewater salinity in the minimum and maximum floods in the restored site 1-4, the undisturbed reference site and other impaired sites in Isla del Carmen, Campeche, Mexico and a conserved mangrove site in South Florida, USA
DOI: 10.6084/m9.figshare.11497071
title: Linear regressions comparing flooding duration vs. the reference site

description: Figure 4
DOI: 10.6084/m9.figshare.11497071.v2
title: Linear regressions comparing flooding duration vs. the reference site

description: Figure 4
DOI: 10.6084/m9.figshare.11497071.v1
title: Mangrove flooding duration

description: Comparing flooding duration in the impaired sites 1, 2, 3 and 4 vs. the reference site (R)
DOI: 10.6084/m9.figshare.11497074.v1
title: Mangrove porewater salinity

description: The behavior of porewater salinity during and after the restoration actions is shown. Transect T1, located in Zone I where the restoration actions began in 2010 and ended in 2012 (this time-lapse considered as during the restoration actions); the years 2013 – 2014 were considered as after the restoration. Transect T2 located in zone II: 2012 during restoration and 2013 – 2014 after restoration.
DOI: 10.6084/m9.figshare.11497059
title: dataset_for_2017_Jiuzhaigou_earthquake

description: This dataset is for plotting the figures in the article on the 2017 Jiuzhaigou Mw6.5 earthquake
DOI: 10.6084/m9.figshare.11497074.v3
title: The behavior of porewater salinity during and after the restoration actions

description: Figure 7
DOI: 10.6084/m9.figshare.11497074.v2
title: Mangrove porewater salinity

description: The behavior of porewater salinity during and after the restoration actions is shown. Transect T1, located in Zone I where the restoration actions began in 2010 and ended in 2012 (this time-lapse considered as during the restoration actions); the years 2013 – 2014 were considered as after the restoration. Transect T2 located in zone II: 2012 during restoration and 2013 – 2014 after restoration.
DOI: 10.6084/m9.figshare.11497050
title: Hydroperiod patterns in mangrove

description: Figure 3
DOI: 10.6084/m9.figshare.11497059.v1
title: dataset_for_2017_Jiuzhaigou_earthquake

description: This dataset is for plotting the figures in the article on the 2017 Jiuzhaigou Mw6.5 earthquake
DOI: 10.6084/m9.figshare.11497050.v2
title: Hydroperiod patterns in mangrove

description: Figure 3
DOI: 10.6084/m9.figshare.11497050.v1
title: Mangrove hydroperiod data

description: Hydroperiod patterns (flood duration, frequency, and level) in three consecutive years after implementation of restoration activities in impaired mangrove areas in Laguna de Términos, Campeche, Mexico.
DOI: 10.6084/m9.figshare.11497032
title: Global Annual Urban Dynamics (1985-2015)

description: High spatiotemporal resolution mapping of global urban change from 1985 to 2015<br>
DOI: 10.6084/m9.figshare.11496954
title: Analyzed data

description: See README for description
DOI: 10.6084/m9.figshare.11496819
title: Habitat Suitability Model for American Bittern

description: Raster model of breeding habitat suitability for American Bitterns within the contiguous U.S. Model development described by Stevens and Conway (2020).<br> These data are supplemental materials for the following manuscript: <br> Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.6084/m9.figshare.11496684
title: Habitat Suitability Model for Limpkin

description: Raster model of breeding habitat suitability for Limpkins within the contiguous U.S. Model development described by Stevens and Conway (2020).<br> These data are supplemental materials for the following manuscript: <br>Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.6084/m9.figshare.11496810
title: Habitat Suitability Model for Purple Gallinule

description: Raster model of breeding habitat suitability for Purple Gallinules within the contiguous U.S. Model development described by Stevens and Conway (2020).<br><br> These data are supplemental materials for the following manuscript: <br> Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.6084/m9.figshare.11496810.v1
title: Habitat Suitability Model for Purple Gallinule

description: Raster model of breeding habitat suitability for Purple Gallinules within the contiguous U.S. Model development described by Stevens and Conway (2020).<br><br> These data are supplemental materials for the following manuscript: <br> Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.6084/m9.figshare.11496684.v1
title: Habitat Suitability Model for Limpkin

description: Raster model of breeding habitat suitability for Limpkins within the contiguous U.S. Model development described by Stevens and Conway (2020).<br> These data are supplemental materials for the following manuscript: <br>Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.5281/zenodo.4001370
title: Are comments on Stack Overflow well organized for easy retrieval by developers?

description: Many Stack Overflow answers have associated informative comments that can strengthen them and assist developers. A prior study found that comments can provide additional information to point out issues in their associated answer, such as the obsolescence of an answer. By showing more informative comments (e.g., the ones with higher scores) and hiding less informative ones, developers can more effectively retrieve information from the comments that are associated with an answer. Currently, Stack Overflow prioritizes the display of comments and as a result, 4.4 million comments (possibly including informative comments) are hidden by default from developers. In this study, we investigate whether this mechanism effectively organizes informative comments. We find that: 1) The current comment organization mechanism does not work well due to the large amount of tie-scored comments (e.g., 87% of the comments have 0-score). 2) In 97.3% of answers with hidden comments, at least one comment that is possibly informative is hidden while another comment with the same score is shown (i.e., unfairly hidden comments). The longest unfairly hidden comment is more likely to be informative than the shortest one. Our findings highlight that Stack Overflow should consider adjusting the comment organization mechanism to help developers effectively retrieve informative comments. Furthermore, we build a classifier that can effectively distinguish informative comments from uninformative comments. We also evaluate two alternative comment organization mechanisms (i.e., the <em>Length</em> mechanism and the <em>Random</em> mechanism) based on text similarity and the prediction of our classifier.
DOI: 10.6084/m9.figshare.11496663
title: Dataset for Space Weather Journal paper "Evaluation of total electron content predictions using three ionosphere-thermosphere models"

description: Dataset is associated with paper submitted to the Space Weather Journal. The modeling runs were performed at the CCMC through their public Request a Model Run interface at https://ccmc.gsfc.nasa.gov/requests/requests.php . Model outputs are stored at the CCMC data depository and we provide links here.
DOI: 10.5281/zenodo.4001369
title: Are comments on Stack Overflow well organized for easy retrieval by developers?

description: Many Stack Overflow answers have associated informative comments that can strengthen them and assist developers. A prior study found that comments can provide additional information to point out issues in their associated answer, such as the obsolescence of an answer. By showing more informative comments (e.g., the ones with higher scores) and hiding less informative ones, developers can more effectively retrieve information from the comments that are associated with an answer. Currently, Stack Overflow prioritizes the display of comments and as a result, 4.4 million comments (possibly including informative comments) are hidden by default from developers. In this study, we investigate whether this mechanism effectively organizes informative comments. We find that: 1) The current comment organization mechanism does not work well due to the large amount of tie-scored comments (e.g., 87% of the comments have 0-score). 2) In 97.3% of answers with hidden comments, at least one comment that is possibly informative is hidden while another comment with the same score is shown (i.e., unfairly hidden comments). The longest unfairly hidden comment is more likely to be informative than the shortest one. Our findings highlight that Stack Overflow should consider adjusting the comment organization mechanism to help developers effectively retrieve informative comments. Furthermore, we build a classifier that can effectively distinguish informative comments from uninformative comments. We also evaluate two alternative comment organization mechanisms (i.e., the <em>Length</em> mechanism and the <em>Random</em> mechanism) based on text similarity and the prediction of our classifier.
DOI: 10.6084/m9.figshare.11495964
title: test data

description: Small test dataset to illustrate usage of and download from a repository in analytical workflows.<br>Contains results from HOBO temperaturelogger placed at 1 m depth in lake Nilsentjønna (74.35807, -20.16317 lat/long wgs84; https://www.geonames.org/10793760/nilsentjonna.html) aZacckenberg, North-East Greenland<br><br>
DOI: 10.6084/m9.figshare.11495964.v1
title: test data

description: Small test dataset to illustrate usage of and download from a repository in analytical workflows.<br>Contains results from HOBO temperaturelogger placed at 1 m depth in lake Nilsentjønna (74.35807, -20.16317 lat/long wgs84; https://www.geonames.org/10793760/nilsentjonna.html) aZacckenberg, North-East Greenland<br><br>
DOI: 10.6084/m9.figshare.11495763
title: Habitat Suitability Model for Yellow Rail

description: Raster model of breeding habitat suitability for Yellow Rails within the contiguous U.S. Model development described by Stevens and Conway (2020).<br> These data are supplemental materials for the following manuscript: <br> Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.6084/m9.figshare.11495763.v1
title: Habitat Suitability Model for Yellow Rail

description: Raster model of breeding habitat suitability for Yellow Rails within the contiguous U.S. Model development described by Stevens and Conway (2020).<br> These data are supplemental materials for the following manuscript: <br> Stevens, B.S., and C.J. Conway. 2020. Mapping habitat suitability at range-wide scales: spatially-explicit distribution models to inform conservation and research for marsh birds. Conservation Science and Practice 2:in press.
DOI: 10.6084/m9.figshare.11495094
title: Consensus Simulation Data and Code

description: Contains data files and generative code for simulated agents engaged in a repeated consensus task. Agents varied in how they selected from the available options and how they "mentally modeled" other group members.
DOI: 10.6084/m9.figshare.11495094.v1
title: Consensus Simulation Data and Code

description: Contains data files and generative code for simulated agents engaged in a repeated consensus task. Agents varied in how they selected from the available options and how they "mentally modeled" other group members.
DOI: 10.6084/m9.figshare.11495055
title: Vertical Datum transformation grids for Mexico.

description: Vertical datum transformation grids for Mexico and Mexico's Digital Surface Model referenced to the EGM96 vertical datum.The procedure followed to obtained these two transformation surfaces is given in the following publication: https://doi.org/10.1038/s41597-020-0511-x. <br>The available data are:<br>1) Transformation surface between NGVD29 and NAVD 88: MexicoTransGridmmNGVD29toNAVD88.zip2) Transformation surface between NGVD29 and EGM96: MexicoTransGridmmNGVD29toEGM96.zip3) Mexico's Digital Terrain Model originally developed by INEGI referenced to EGM96 (the original CEM was referenced to NGVD29). <br>These files were compressed using Zstandard.<br><br>
DOI: 10.6084/m9.figshare.11495055.v1
title: Vertical Datum transformation surfaces for Mexico.

description: Vertical datum transformation grids for Mexico and Mexico's Digital Surface Model referenced to the EGM96 vertical datum.1) Transformation surface between NGVD29 and NAVD 88: MexicoTransGridmmNGVD29toNAVD88.zip2) Transformation surface between NGVD29 and EGM96: MexicoTransGridmmNGVD29toEGM96.zip3) Mexico's Digital Terrain Model originally developed by INEGI referenced to EGM96 (the original CEM was referenced to NGVD29). <br>These files were compressed using Zstandard.<br><br>
DOI: 10.6084/m9.figshare.11495055.v2
title: Vertical Datum transformation grids for Mexico.

description: Vertical datum transformation grids for Mexico and Mexico's Digital Surface Model referenced to the EGM96 vertical datum.1) Transformation surface between NGVD29 and NAVD 88: MexicoTransGridmmNGVD29toNAVD88.zip2) Transformation surface between NGVD29 and EGM96: MexicoTransGridmmNGVD29toEGM96.zip3) Mexico's Digital Terrain Model originally developed by INEGI referenced to EGM96 (the original CEM was referenced to NGVD29). <br>These files were compressed using Zstandard.<br><br>
DOI: 10.6084/m9.figshare.11495055.v3
title: Vertical Datum transformation grids for Mexico.

description: Vertical datum transformation grids for Mexico and Mexico's Digital Surface Model referenced to the EGM96 vertical datum.The procedure followed to obtained these two transformation surfaces is given in the following publication: https://doi.org/10.1038/s41597-020-0511-x. <br>The available data are:<br>1) Transformation surface between NGVD29 and NAVD 88: MexicoTransGridmmNGVD29toNAVD88.zip2) Transformation surface between NGVD29 and EGM96: MexicoTransGridmmNGVD29toEGM96.zip3) Mexico's Digital Terrain Model originally developed by INEGI referenced to EGM96 (the original CEM was referenced to NGVD29). <br>These files were compressed using Zstandard.<br><br>
DOI: 10.6084/m9.figshare.11494716
title: SPA-OPS - survey of library consortia - anonymised responses

description: Anonymised data from a survey of library consortia conducted as part of the Society Publishers Accelerating Open access and Plan S (SPA-OPS) project. Twenty-six responses were received.<br>This work was conducted by Alicia Wise and Lorraine Estelle of Information Power. The SPA-OPS project was commissioned by Wellcome, UKRI, and the Association of Learned and Professional Society Publishers (ALPSP).
DOI: 10.6084/m9.figshare.11494671
title: SPA-OPS - survey of learned societies - anonymised responses

description: Anonymised data from a survey of learned societies conducted as part of the Society Publishers Accelerating Open access and Plan S (SPA-OPS) project. 105 responses were received.<br>This work was conducted by Alicia Wise and Lorraine Estelle of Information Power. The SPA-OPS project was commissioned by Wellcome, UKRI, and the Association of Learned and Professional Society Publishers (ALPSP). <br>
DOI: 10.6084/m9.figshare.11494716.v1
title: SPA-OPS - survey of library consortia - anonymised responses

description: Anonymised data from a survey of library consortia conducted as part of the Society Publishers Accelerating Open access and Plan S (SPA-OPS) project. Twenty-six responses were received.<br>This work was conducted by Alicia Wise and Lorraine Estelle of Information Power. The SPA-OPS project was commissioned by Wellcome, UKRI, and the Association of Learned and Professional Society Publishers (ALPSP).
DOI: 10.6084/m9.figshare.11494626
title: Metadata record for: Reference data on in vitro anatomy and indentation response of tissue layers of musculoskeletal extremities

description: This dataset contains key characteristics about the data described in the Data Descriptor Reference data on in vitro anatomy and indentation response of tissue layers of musculoskeletal extremities. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br><br>Versioning Note:Version 2 was generated when the metadata format was updated from JSON to JSON-LD. This was an automatic process that changed only the format, not the contents, of the metadata.<br>