cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2pdc0h
title: CCDC 2484526: Experimental Crystal Structure Determination

description: Related Article: Livia Getzner, Konul Amraliyeva, Yasmine Remili, Laure Vendier, Gábor Molnár, Saioa Cobo, Azzedine Bousseksou|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c04117
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pdhcz
title: CCDC 2484661: Experimental Crystal Structure Determination

description: Related Article: Livia Getzner, Konul Amraliyeva, Yasmine Remili, Laure Vendier, Gábor Molnár, Saioa Cobo, Azzedine Bousseksou|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c04117
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pdhd0
title: CCDC 2484662: Experimental Crystal Structure Determination

description: Related Article: Livia Getzner, Konul Amraliyeva, Yasmine Remili, Laure Vendier, Gábor Molnár, Saioa Cobo, Azzedine Bousseksou|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c04117
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pdhf1
title: CCDC 2484663: Experimental Crystal Structure Determination

description: Related Article: Livia Getzner, Konul Amraliyeva, Yasmine Remili, Laure Vendier, Gábor Molnár, Saioa Cobo, Azzedine Bousseksou|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c04117
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pdhg2
title: CCDC 2484664: Experimental Crystal Structure Determination

description: Related Article: Livia Getzner, Konul Amraliyeva, Yasmine Remili, Laure Vendier, Gábor Molnár, Saioa Cobo, Azzedine Bousseksou|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c04117
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pdhh3
title: CCDC 2484665: Experimental Crystal Structure Determination

description: Related Article: Livia Getzner, Konul Amraliyeva, Yasmine Remili, Laure Vendier, Gábor Molnár, Saioa Cobo, Azzedine Bousseksou|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c04117
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mh2dm
title: CCDC 2427560: Experimental Crystal Structure Determination

description: Related Article: Livia Getzner, Konul Amraliyeva, Yasmine Remili, Laure Vendier, Gábor Molnár, Saioa Cobo, Azzedine Bousseksou|2025|Inorg.Chem.|||doi:10.1021/acs.inorgchem.5c04117
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/kzthgj
title: Suivi des oiseaux de passage : programme ACT - Programme ACT : Répartition Caille des blés 1999 - 2003 Coordonnées GPS Lambert 93

description: Aire de reproduction de l'espèce Caille des blés fondée sur la présence de mâles chanteurs au printemps (avril – juin), à partir de points d’écoutes répartis le long d’itinéraires échantillons. Environ 5 000 points ont été visités chaque année entre 1999 et 2003
DOI: 10.5281/zenodo.17630741
title: Discovering the unseen: a performance comparison of taxonomic classification methods for unknown DNA barcodes
DOI: 10.5281/zenodo.17630742
title: Discovering the unseen: a performance comparison of taxonomic classification methods for unknown DNA barcodes
DOI: 10.15468/dl.9bbqk2
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "PublishingOrg is 2e7df380-8356-4533-bcb3-5459e23c794e",
 "TaxonKey is Fratercula arctica",
 "Year 1000-1950"
 ]
}

 The dataset includes 245 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039126-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fnp5gs
title: Occurrence Download

description: A dataset containing 5083 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((124.01547 36.31229,198.05169 36.31229,198.05169 67.72085,124.01547 67.72085,124.01547 36.31229))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Megaptera novaeangliae"
 ]
}

 The dataset includes 5083 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039125-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zypmte
title: Occurrence Download

description: A dataset containing 548 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia sulcata",
 "HasCoordinate is true"
 ]
}

 The dataset includes 548 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039127-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/7jugz3
title: ONCFS Réseau Ours brun - Ours 2009 présence Occasionnelle Mailles 10km LAEA Réseau Ours brun ONCFS

description: Le réseau Ours Brun constitue un outil de suivi scientifique à grande échelle de la population d’ours pyrénéenne. Le Réseau Ours Brun constitue un réseau d’observateurs multi-partenaires susceptibles de recueillir des indices de présence de l’espèce sur l’ensemble de l’aire de répartition qui couvre plusieurs milliers de kilomètres carrés.
DOI: 10.15468/dl.ugjen6
title: Occurrence Download

description: A dataset containing 23632 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Urophycis tenuis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 23632 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039128-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14204620
title: Data from: PRDM9 drives the location and rapid evolution of recombination hotspots in salmonids

description: Usage notes

Data and scripts related for the study entitled "PRDM9 drives the location and rapid evolution of recombination hotspots in salmonids" by Raynaud, Sanna et al. are provided. 

 

ChIP-Seq:

Fragments and peak coordinates obtained from DMC1 ChIP-seq (SSDS) experiments on rainbow trout testes are given, as well as fragments obtained from ChIP-seq experiments for H3K4me3 and H3K36me3 from testes and peak coordinates obtained from ChIP-seq experiments for H3K4me3 from brain tissue. Files generated during DSB hotspot motif analysis are also provided.

 

LD-based recombination landscapes:

VCFs:

VCF files generated by GATK for 3 salmon species: coho salmon Oncorhynchus kisutch (one population), rainbow trout Oncorhynchus mykiss (one population) and Atlantic salmon Salmo salar (three populations: GP, BS and NS). Filtered and phased VCF files are also provided for the 5 populations. 

Population recombination landscapes:

Population recombination rates estimated by LDhelmet for each chromosome of 5 populations belonging to three different salmonid species: coho salmon Oncorhynchus kisutch (one population), rainbow trout Oncorhynchus mykiss (one population) and Atlantic salmon Salmo salar (three populations: GP, BS and NS). The LDhelmet estimates for the 5 independent replicate runs for each chromosome and the whole-genome recombination landscapes averaged over the five runs are given. The whole-genome recombination landscapes averaged over five replicates are also given for sea bass Dicentrarchus labrax. 

Processed LD-based maps and recombination hotspots:

LDhelmet recombination maps smoothed in 2-kb and 100-kb windows and hotspot list called from the 2-kb smooth maps and the raw LDhelmet maps are given for the 5 salmon populations and for D. labrax. 

Transposable element annotations:

File containing the location and type of transposable elements mapped with RepeatMasker are provided for O. kisutch, O. mykiss and S. salar. 

PRDM9 paralog alignment in Salmonids:

Fasta sequences and multiple alignments in mase format of the PRDM9α and β paralogues of the 12 salmonid species, northern pike (Esox lucius) and sea bass (Dicentrarchus labrax) are provided.

 

PRDM9 alleles in rainbow trout and Atlantic salmon:

Fasta sequences of the PRDM9α alleles identified in two paralogs (α1.a.1-2 and α2.2) in two salmonid species, Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss), as well as their allele frequencies and their amino acid diversity at the DNA-binding residues are provided.

 

Prediction of CGI-associated TSS in salmonids:

Data and scripts in the S2 analysis to predict CGI-associated TSSs in salmonids are given. 

 

Scripts:

Scripts are provided to reproduce read mapping, variant calling, physical and statistical phasing, polarisation, reconstruction of the LD-based map, analysis of the LD-based maps, analysis of the DMC1 ChIP-seq data and final figures of the paper. 

Data_Scripts_Raynaud_et_al_2024.tar.gz
DOI: 10.5281/zenodo.11083953
title: Data from: PRDM9 drives the location and rapid evolution of recombination hotspots in salmonids

description: Usage notes

Data and scripts related for the study entitled "PRDM9 drives the location and rapid evolution of recombination hotspots in salmonids" by Raynaud, Sanna et al. are provided. 

 

ChIP-Seq:

Fragments and peak coordinates obtained from DMC1 ChIP-seq (SSDS) experiments on rainbow trout testes are given, as well as fragments obtained from ChIP-seq experiments for H3K4me3 and H3K36me3 from testes and peak coordinates obtained from ChIP-seq experiments for H3K4me3 from brain tissue. Files generated during DSB hotspot motif analysis are also provided.

 

LD-based recombination landscapes:

VCFs:

VCF files generated by GATK for 3 salmon species: coho salmon Oncorhynchus kisutch (one population), rainbow trout Oncorhynchus mykiss (one population) and Atlantic salmon Salmo salar (three populations: GP, BS and NS). Filtered and phased VCF files are also provided for the 5 populations. 

Population recombination landscapes:

Population recombination rates estimated by LDhelmet for each chromosome of 5 populations belonging to three different salmonid species: coho salmon Oncorhynchus kisutch (one population), rainbow trout Oncorhynchus mykiss (one population) and Atlantic salmon Salmo salar (three populations: GP, BS and NS). The LDhelmet estimates for the 5 independent replicate runs for each chromosome and the whole-genome recombination landscapes averaged over the five runs are given. The whole-genome recombination landscapes averaged over five replicates are also given for sea bass Dicentrarchus labrax. 

Processed LD-based maps and recombination hotspots:

LDhelmet recombination maps smoothed in 2-kb and 100-kb windows and hotspot list called from the 2-kb smooth maps and the raw LDhelmet maps are given for the 5 salmon populations and for D. labrax. 

Transposable element annotations:

File containing the location and type of transposable elements mapped with RepeatMasker are provided for O. kisutch, O. mykiss and S. salar. 

PRDM9 paralog alignment in Salmonids:

Fasta sequences and multiple alignments in mase format of the PRDM9α and β paralogues of the 12 salmonid species, northern pike (Esox lucius) and sea bass (Dicentrarchus labrax) are provided.

 

PRDM9 alleles in rainbow trout and Atlantic salmon:

Fasta sequences of the PRDM9α alleles identified in two paralogs (α1.a.1-2 and α2.2) in two salmonid species, Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss), as well as their allele frequencies and their amino acid diversity at the DNA-binding residues are provided.

 

Prediction of CGI-associated TSS in salmonids:

Data and scripts in the S2 analysis to predict CGI-associated TSSs in salmonids are given. 

 

Scripts:

Scripts are provided to reproduce read mapping, variant calling, physical and statistical phasing, polarisation, reconstruction of the LD-based map, analysis of the LD-based maps, analysis of the DMC1 ChIP-seq data and final figures of the paper. 

Data_Scripts_Raynaud_et_al_2024.tar.gz
DOI: 10.15468/xqesji
title: Inventaire des Crustacés Isopodes terrestres de France métropolitaine - Inventaire des Crustacés Isopodes de France métropolitaine

description: Inventaire des espèces de crustacés Isopodes sur le territoire français

Les coordinateurs ont été financés dans le cadre de l'appel à projets pour soutenir l'INPN (été 2014) et une large saisie des données bibliographiques et de collections est en cours.
DOI: 10.5281/zenodo.17510518
title: FCD30: A Long-Term 30 m Forest Cover Dataset for China (1990-2020) Derived from Landsat Time Series and Deep Learning

description: This is the long-term forest cover dataset for China since 1990 at five-year intervals.

The dataset is defined in Albers projection with a spatial resolution of 16 m. It is in a GeoTIFF format and the a pixel value indicate whether it is forest cover or not. Value 0 means non-forest cover and value 1 means forest cover. The spatial extent of this dataset includes mainland China and neighboring regions.
DOI: 10.5281/zenodo.17510517
title: FCD30: A Long-Term 30 m Forest Cover Dataset for China (1990-2020) Derived from Landsat Time Series and Deep Learning

description: This is the long-term forest cover dataset for China since 1990 at five-year intervals.

The dataset is defined in Albers projection with a spatial resolution of 16 m. It is in a GeoTIFF format and the a pixel value indicate whether it is forest cover or not. Value 0 means non-forest cover and value 1 means forest cover. The spatial extent of this dataset includes mainland China and neighboring regions.
DOI: 10.57903/uj/u7ilnx
title: Social-Psychological Determinants of Helping War Refugees From Ukraine

description: The dataset contains five waves of data collected after the invasion of Russia on Ukraine. The first wave of data collection started on 11 March, 2022; the second on 18 March, 2022; the third on 26 March, 2022, the fourth on 21 April, 2022; and the final one on 5 March, 2023. The dataset containing the sample characteristics and codebook are available for download, while the full anonymised dataset is accessible after registering the personal and research information according to the form provided. The filled form should be directed to malgorzata.kossowska@uj.edu.pl
DOI: 10.15468/yug5l2
title: Stonefly (Plecoptera) Data for Great Britain for 1955-2005

description: Stonefly records compiled largely from country agency samples of river invertebrates together with casual records from amateur recorders. There are no plans for an atlas at present.
 The dataset is comprised of four surveys:
 - Stonefly records from the Environment Agency collated by David Pryce (~37000 records from England and Wales)
 - Casual and Malaise Trap records collated by David Pryce (~1000 records from Wales, Scotland and Western England)
 - Brachyptera putata records from Scotland (~100 records from David Pryce)
 - Incidental records collected during Mayfly recording from Craig Macadam (&lt;100 records)
DOI: 10.15468/dl.t3uz2n
title: Occurrence Download

description: A dataset containing 7038 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia tetragonophylla",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7038 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039130-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/8z0y-q668
title: "GMDPUnet Model-Associated High-Resolution Optical Remote Sensing Semantic Segmentation Dataset "

description: "This dataset supports the research \"GMDPUnet: A Global Modeling and Detail Perception Fusion Network for High-Resolution Remote Sensing Image Segmentation\", constructed by selecting data from the Vaihingen and Potsdam high-resolution optical remote sensing datasets.Along with the original pixel-level annotations for 6 land cover categories (e.g., buildings, vegetation, roads). The dataset can be directly used for training and validation of high-resolution remote sensing image semantic segmentation models (e.g., GMDPUnet), suitable for performance testing of global-local feature fusion networks, and provides standardized data support for comparative experiments of related segmentation algorithms."
DOI: 10.15468/sfc7ee
title: Fichier communal des ongulés

description: L'inventaire a officiellement été lancé en 1985 et s'est terminé en 1989. Il a été repris sous une autre forme par l'Office National de la Chasse et de la Faune Sauvage.
DOI: 10.3886/e183530
title: Replication Code for: Tripping through Hoops: The Effect of Violating Compulsory Government Procedures

description: This deposit contains the code used to generate the analysis files and analyses used in the paper "Tripping through Hoops: The Effect of Violating Compulsory Government Procedures"
description: All first appearances for traffic, misdemeanor, and municipal cases in the study site that were not resolved by two weeks prior to the court date for the time period between March 7, 2018 and July 15, 2019.
DOI: 10.15468/zxipyk
title: Réseau Loup - Lynx ONCFS - Lynx 1990 présence Occasionnelle Mailles 10km Réseau Loup-Lynx ONCFS

description: Cartographie de synthèse de la présence détectée du lynx en France métropolitaine par un réseau de correspondants départementaux multipartenaire, formé et piloté par l'ONCFS sur le plan scientifique et technique et géré administrativement au niveau local par les DDT. Ce jeu de donnée ventile la présence de l'espèce en maille européenne 10 km (LAEA) de présence dite occasionnelle vs régulière de l'espèce, sur la base de la récurrence spatiale et la quantité d'indices ou constats d'attaques validés au cours de l'a dernière biennale chevauchante (ex: données recueillies entre le 01/04/2012 et le 31/03/2015 pour l'exercice 2015). Ce jeu de donnée correspond à la présence Occasionnelle de l'espèce. Les cartographies correspondant aux mailles européennes peuvent être trouvées sur le site de l'ONCFS http://www.oncfs.gouv.fr/Cartographie-ru4/Le-portail-cartographique-de-donnees-ar291
DOI: 10.3886/e183530v1
title: Replication Code for: Tripping through Hoops: The Effect of Violating Compulsory Government Procedures

description: This deposit contains the code used to generate the analysis files and analyses used in the paper "Tripping through Hoops: The Effect of Violating Compulsory Government Procedures"
description: All first appearances for traffic, misdemeanor, and municipal cases in the study site that were not resolved by two weeks prior to the court date for the time period between March 7, 2018 and July 15, 2019.
DOI: 10.15468/dl.eu4ukh
title: Occurrence Download

description: A dataset containing 4609 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia tortilis",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4609 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039132-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30639110
title: Water level data of lakes in Qinghai

description: 青海湖卫星水位数据
DOI: 10.6084/m9.figshare.30639110.v1
title: Water level data of lakes in Qinghai

description: 青海湖卫星水位数据
DOI: 10.15468/dl.znks9x
title: Occurrence Download

description: A dataset containing 252 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myripristis chryseres",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 252 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039133-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pqfg7a
title: Occurrence Download

description: A dataset containing 120000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Anser fabalis"
 ]
}

 The dataset includes 120000 records from 390 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039100-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/c8gtsk
title: Données de l'atlas des Mammifères sauvages de Midi-Pyrénées (données agrégées à la zone hydrographique de la BDcarthage)

description: Synthèse des données utilisées pour la réalisation des cartographies publiées dans l'atlas des Mammifères sauvages de Midi-Pyrénées pour les espèces liées au milieu aquatique. Les données sont agrégées aux zones hydrographiques, plus petit décopage de la BDcarthage. Les données concernant les espèces non aquatiques ont été agrégées suivant un maillage de 10km et se trouvent dans un autre jeux de données (atlas_mam_MP). 

Les date de prise en compte de la présence des espèces varient suivant les ordres, et sont indiquées dans les fichiers de données.



Synthèse des données centralisées pour la réalisation de l'atlas régional des Mammifères sauvages de Midi-Pyrénées. Les données sources proviennent de toutes les associations qui ont participé à la réalisation de cet atlas. Elles sont pour la plupart issues de protocoles spécifiques à chaque espèce ou groupe d'espèces, ou de contacts occasionnels. 



Le nom indiqué en validation est Emmanuelle Jacquot, coordinatrice de l'atlas, mais en réalité, chaque carte maillée a été validée par l'ensemble des experts participants à la réalisation de cet atlas.