cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5m03z78t
title: MassIVE MSV000093773 - Untargeted_Analysis_Hydroxilamine
title: LC-MS/MS DDA in positive mode of Natural extracts treated with hidroxylamine
DOI: 10.5281/zenodo.10462254
title: Reproducible Experiment Asking ChatGPT to Create JSON; Includes data set and Python code to reproduce

description: This is an experiment in the accuracy of ChatGPT 3.5 and 4.0 to construct a JSON concordance from a list of words.

The results show that ChatGPT is unreliable at this task for any list above a trivial size, and that the nature of the list of words provided, temperature settings, and version of ChatGPT all have a strong effect on the output. Therefore, the only strong generalization that can be made is that ChatGPT is unreliable.
DOI: 10.5281/zenodo.10462255
title: Reproducible Experiment Asking ChatGPT to Create JSON; Includes data set and Python code to reproduce

description: This is an experiment in the accuracy of ChatGPT 3.5 and 4.0 to construct a JSON concordance from a list of words.

The results show that ChatGPT is unreliable at this task for any list above a trivial size, and that the nature of the list of words provided, temperature settings, and version of ChatGPT all have a strong effect on the output. Therefore, the only strong generalization that can be made is that ChatGPT is unreliable.
DOI: 10.6084/m9.figshare.22433848.v1
title: Global carbon isoscapes dataset of C3 plant leaves at 0.05° spatial resolution from 2001 to 2020

description: This dataset provides the carbon isotope maps of C<sub>3</sub> plant leaves based on machine learning algorithms and MODIS satellite remote sensing reflectance, atmospheric carbon, vegetation physiology, and geographic parameters estimated for the period 2001-2020 with a spatial resolution of 0.05 degrees.
DOI: 10.5281/zenodo.10462282
title: pretest and posttest scores
DOI: 10.5281/zenodo.10462283
title: pretest and posttest scores
DOI: 10.5255/ukda-sn-855535
title: Spatial and Temporal Visual Integration, 2021

description: We present four psychophysics experiments investigating spatiotemporal summation in various visual contexts. The experiments are 4AFC detection tasks where a target is briefly represented in one of four known locations. Stimuli consist of targets with various spatial (0 to .9dva) or temporal (0 to 100ms) properties. Staircase procedures are used to identify luminance thresholds at which the targets are detected with 75% accuracy. Lower thresholds are taken as indictive of greater summation than higher thresholds. 
In the first experiment, the target stimuli consist of two probes presented with varying spatial (0 to .9dva) and temporal (0 to 100ms) separation. We find an interaction between spatial and temporal integration: as spatial separation increased, the temporal separation at which the probes are most easily detected also increased. That is, probes with moderate spatial separation are more easily detected when they also have temporal separation compared to when the two probes are presented simultaneously. 
In a second study, targets consist of a single probe, presented for various durations (8 to 100ms), with the aim of identifying the critical period during which complete summation occurs (e.g., Bloch’s critical duration). Similarly, a third experiment used targets presented for 8ms with varying lengths of .01 to .9dva to identify the spatial area of complete summation (e.g., Ricco’s area). 
A fourth study builds on the first experiment, but rather than a single target appearing in one of four locations, three targets are presented and participants identify the location which did NOT contain a target. Again, we find that for conditions with spatial separation, participants had higher lower thresholds when the probes were also temporally separated. 
Experiments 1 and 4 provide robust evidence that detection thresholds can be lower for temporally separated targets than for concurrently presented targets. The results from experiments 1 and 4 do not align with the Ricco area or Bloch’s critical duration. However, the results can be interpreted in terms of a facilitating effect from motion detectors. Experiment 4 suggests that this effect is the product of multiple local mechanisms, rather than due to some global motion processing.
DOI: 10.5255/ukda-sn-856908
title: Impact of Visual Self-Motion Cues on Spatial and Temporal Visual Integration, 2023

description: We present two psychophysics experiments investigating the impact of visual self-motion cues on visual spatiotemporal summation. 
The first experiment is a 4AFC target detection task where participants give the location of a target that appeared in one of four known locations, against a moving background. Each target is composed of two small probes which are separated by four diagonal pixels. Probes always appear for one frame (8.33ms). The probes are either presented concurrently (at the same time) or are separated by one of six interstimulus-intervals (ISIs) of 0 to 100ms. The two probes are aligned radially, such that the second probe is either inward (closer to the centre of the screen) or outward than the first probe. The background is an array of ~1000 dots which move in an expanding or contracting pattern to simulate forwards or backwards self-motion. The main manipulation is the relationship between the alignment of the probes (inward or outward) and the background motion (expanding or contracting). The relationship can either be congruent (both in same direction) or incongruent. Staircases adjust the target luminance for each condition to identify the threshold where participants have 75% accuracy. 
A second study has the same design but with targets appearing in three of the four known locations and participants identifying the location which did NOT contain a target.
Finally a flow-parsing study was conducted to validate that our background stimulus was eliciting self-motion cues. In this study participants saw a single moving target in one of four locations and indicated whether it was moving inwards or outwards. A staircase procedure adjusted the target speed to identify the speed where participant gave an ‘inward’ response 50% of the time.
This project is still ongoing with further data to collect.
DOI: 10.5281/zenodo.6619882
title: Methane yield data from systematic review

description: This table presents data from a systematic review that examines the application of different pretreatments prior anaerobic digestion. It provides a concise summary of important findings, offering insights on methods to enhance methane production. This resource is valuable for researchers and practitioners seeking to optimize anaerobic digestion for increased efficiency and sustainable energy generation.
DOI: 10.5281/zenodo.6619881
title: Methane yield data from systematic review

description: This table presents data from a systematic review that examines the application of different pretreatments prior anaerobic digestion. It provides a concise summary of important findings, offering insights on methods to enhance methane production. This resource is valuable for researchers and practitioners seeking to optimize anaerobic digestion for increased efficiency and sustainable energy generation.
DOI: 10.34740/kaggle/dsv/7343788
title: 2021 World Population (updated daily)
DOI: 10.34740/kaggle/dsv/7343816
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5281/zenodo.10047862
title: Data release related to NAME umbrella cloud parameter sensitivity tests for the 2015 Calbuco volcanic eruption

description: Dataset of the Met Office Numerical Atmospheric-dispersion Modelling Environment (NAME) umbrella cloud simulations for the 2015 Calbuco volcanic eruption (model version v8.1).  The name of each subfolder in the .zip file represents the values used for the three parameters considered in that simulation (152 simulations in total): 



plume intrusion height (z)

umbrella cloud thickness (dz)

volume flow rate (Q)


Each individual .txt file within the subfolder represents the NAME output (volcanic ash concentration) for a specific time step for the simulation with the given combination of the three umbrella cloud parameters in the name of the folder. Only the second phase of the eruption is simulated.
DOI: 10.5281/zenodo.10047863
title: Data release related to NAME umbrella cloud parameter sensitivity tests for the 2015 Calbuco volcanic eruption

description: Dataset of the Met Office Numerical Atmospheric-dispersion Modelling Environment (NAME) umbrella cloud simulations for the 2015 Calbuco volcanic eruption (model version v8.1).  The name of each subfolder in the .zip file represents the values used for the three parameters considered in that simulation (152 simulations in total): 



plume intrusion height (z)

umbrella cloud thickness (dz)

volume flow rate (Q)


Each individual .txt file within the subfolder represents the NAME output (volcanic ash concentration) for a specific time step for the simulation with the given combination of the three umbrella cloud parameters in the name of the folder. Only the second phase of the eruption is simulated.
DOI: 10.18712/nsd-nsd3149-v1
title: Survey on the free HPV vaccine immunization program

description: Statistics Norway (SSB) conducted a survey in the autumn of 2019 on the free HPV vaccine immunization program. The survey was conducted in collaboration with the Norwegian Institute of Public Health (FHI). The purpose of the survey was to obtain information about the reasons why young women chose or did not choose to make use of the free vaccine offer, to what extent the communication strategy and the measures that were put in place contributed to raising knowledge, attitude and/or behavior change, as well as whether there are differences based on education level, income, country of birth, marital status and number of children.

The survey population includes all women born in the period of 1991 to 1996 who are registered as residents in the National Population Register. The vaccine program ensured that these women, in the period 1st of September 2016 to 30th of June 2019, were offered a vaccine against human papillomavirus infection (HPV infection) to prevent cervical cancer. The data collection was carried out entirely on the web. The field period spanned two weeks, from 23rd of September to 7th of October 2019.
DOI: 10.6084/m9.figshare.24948609.v1
title: Supp B: Multi-element geochemical analyses on ultrafine soils in Western Australia – towards establishing abundance ranges in mineral exploration settings

description: Supplementary Data B
DOI: 10.6084/m9.figshare.24948609
title: Supp B: Multi-element geochemical analyses on ultrafine soils in Western Australia – towards establishing abundance ranges in mineral exploration settings

description: Supplementary Data B
DOI: 10.6084/m9.figshare.24948621
title: Supp C: Multi-element geochemical analyses on ultrafine soils in Western Australia – towards establishing abundance ranges in mineral exploration settings

description: Supplementary Data C
DOI: 10.6084/m9.figshare.24948621.v1
title: Supp C: Multi-element geochemical analyses on ultrafine soils in Western Australia – towards establishing abundance ranges in mineral exploration settings

description: Supplementary Data C
DOI: 10.6084/m9.figshare.24063999.v1
title: Supplementary Table2

description: <b>Supplementary Table 2</b>: Differential and KEGG enrichment analysis of host gene expression. Related to Figure 2. <b>(a)</b>Differential Genes of CMS1. <b>(b)</b>Differential Genes of CMS2.<b>(c)</b>Differential Genes of CMS3. <b>(d)</b>Differential Genes of CMS4. <b>(e)</b>The Enriched KEGG Pathways of Differential Genes of CMS1(P value&lt;0.05). <b>(f)</b>The Enriched KEGG Pathways of Differential Genes of CMS2(P value&lt;0.05). <b>(g)</b>The Enriched KEGG Pathways of Differential Genes of CMS3(P value&lt;0.05).<b> (h)</b>The Enriched KEGG Pathways of Differential Genes of CMS4(P value&lt;0.05).
DOI: 10.5281/zenodo.10461478
title: Temperatures of Vein Formation Associated with Plate Interface Deformation Constrained by Oxygen and Clumped Isotope Thermometry

description: In this study, we investigate carbon and oxygen isotopic composition and temperature estimates associated with mineral veins within five mélange units of the Cretaceous Shimanto belt in Japan and one within the Kodiak accretionary complex in Alaska. In-situ isotopic measurements of quartz and calcite in the veins were performed using the Secondary Ion Mass Spectrometer (SIMS). The δ18O values obtained from SIMS measurements were subsequently employed to calculate the temperature at which isotopic equilibrium was last achieved between the quartz-calcite pairs (i.e., the temperature at which the vein minerals formed). Additionally, clumped isotope analyses were conducted on carbonate samples extracted from the veins. Temperatures were then derived from carbonate isotopic clumping (Δ47). Remarkably, temperature estimates obtained from both geothermometers fell within the range of 100 to 250°C, despite the variation in vein types and distinct maximum temperature records of each mélange. This finding suggests that veins formed in response to dehydration processes operating over a temperature range of less than 150°C, with liberated fluids playing a crucial role in facilitating mass transfer.
DOI: 10.6084/m9.figshare.24948585
title: Untitled Item

description: Bacterial 16S rRNA V1-V2 data
DOI: 10.6084/m9.figshare.24948585.v1
title: Untitled Item

description: Bacterial 16S rRNA V1-V2 data
DOI: 10.5281/zenodo.10461130
title: Evaluating robot workspaces with performance maps

description: Evaluating robot workspaces with performance maps

Aline Kluge-Wilkes, Presley Demuner Reverdito

The following data set was created while validating a proposed method to evaluate robot workspaces with different performance metrics. 

The underlying paper will be presented at the CIRP CATS 2024, the 10th Conference on Assembly Technology and Systems, hosted in Karlsruhe from 24-26.April.2024 and published thereafter.

Deploying mobile robots in line-less and mobile assembly systems without predefined formations necessitates understanding the robot's capabilities and determining the tasks it can perform. The data set concerns performance maps to assess the feasibility of assembly tasks within the robot's workspace. These maps offer quantifiable metrics to compare the suitability of base placements for mobile robots concerning the feasibility of specific assembly tasks.

Performance maps are a discretised representation of a particular robot's distribution of selected performance metrics. The current implementation focuses on calculating manipulability, dexterity, and condition number. Using a URDF robot model and task poses as input, the metrics are computed across distributed poses within the robot's workspace at a specified resolution, forming the performance map.

The data set contains the application of the performance map to exemplary tasks and robots.

A Design of Experiments (DoE) was conducted to investigate the influence of three predictor variables on robot manipulation performance. The predictor variables considered in the study were as follows:

1. Resolution (R): Two levels of resolution, 0.08m and 0.12m, were examined to assess their impact on robot performance representation.

2. Number of poses (N): Two different quantities of poses, 25 and 50, were studied to understand how they affect the representation of the robot's capabilities.

3. Robot Model: Two distinct robot models, the ABB IRB1600-1.2 and the ABB IRB120-0.58, were chosen for the experiments.

 

Eight experiments were designed and executed, each with a unique combination of the predictor variables. These experiments are summarised in the Excel-sheet "DOE-tests-and-results". The first table overviews the eight experiments. The following eight tables indicate the positions and the results: the respective calculated robot's performance metrics. 

The .json files specify the poses for which the respective performance metrics (dexterity index, reciprocal condition number, and manipulability index) per robot were calculated.

The included .png files visualise the distribution of each index for each conducted experiment in a performance map. The maps were created with Matplotlib. 

 

-------------------------------------------------------------------------------------------------------------------------------------------------------

Acknowledgement:

Funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy - EXC-2023 Internet of Production - 390621612.
DOI: 10.6084/m9.figshare.24411997
title: Chromosome-scale de novo genome assembly andannotation of three representative Casuarina species:C. equisetifolia, C. glauca, and C. cunninghamiana

description: Chromosome-scale de novo genome assembly andannotation of three representative Casuarina species:C. equisetifolia, C. glauca, and C. cunninghamianaAustralian pine (Casuarina spp.) is extensively planted in tropical and subtropical regions for wood produc?tion, shelterbelts, environmental protection, and ecological restoration due to their superior biological char?acteristics, such as rapid growth, wind and salt tolerance, and nitrogen fixation. To analyze the genomicdiversity of Casuarina, we sequenced the genomes and constructed de novo genome assemblies of thethree most widely planted Casuarina species: C. equisetifolia, C. glauca, and C. cunninghamiana. We gener?ated chromosome-scale genome sequences using both Pacific Biosciences (PacBio) Sequel sequencing andchromosome conformation capture technology (Hi-C). The total genome sizes for C. equisetifolia, C. glauca,and C. cunninghamiana are 268 942 579 bp, 296 631 783 bp, and 293 483 606 bp, respectively, of which25.91, 27.15, and 27.74% were annotated as repetitive sequences. We annotated 23 162, 24 673, and 24 674protein-coding genes in C. equisetifolia, C. glauca, and C. cunninghamiana, respectively. We then collectedbranchlets from male and female individuals for whole-genome bisulfite sequencing (BS-seq) to explore theepigenetic regulation of sex determination in these three species. Transcriptome sequencing (RNA-seq)revealed differential expression of phytohormone-related genes between male and female plants. In sum?mary, we generated three chromosome-level genome assemblies and comprehensive DNA methylation andtranscriptome datasets from both male and female material for three Casuarina species, providing a basisfor the comprehensive investigation of genomic diversity and functional gene discovery of Casuarina in the future.. Please cite following reference if you use this dataset in your study:Zhang, Y., Wei, Y., Meng, J., Wang, Y., Nie, S., Zhang, Z., ... & Gu, L. (2023). Chromosome‐scale de novo genome assembly and annotation of three representative Casuarina species: C. equisetifolia, C. glauca, and C. cunninghamiana. <i>The Plant Journal</i>, <i>114</i>(6), 1490-1505.All suggestions are welcome to lfgu@fafu.edu.cn
DOI: 10.6084/m9.figshare.24411997.v5
title: Chromosome-scale de novo genome assembly andannotation of three representative Casuarina species:C. equisetifolia, C. glauca, and C. cunninghamiana

description: Chromosome-scale de novo genome assembly andannotation of three representative Casuarina species:C. equisetifolia, C. glauca, and C. cunninghamianaAustralian pine (Casuarina spp.) is extensively planted in tropical and subtropical regions for wood produc?tion, shelterbelts, environmental protection, and ecological restoration due to their superior biological char?acteristics, such as rapid growth, wind and salt tolerance, and nitrogen fixation. To analyze the genomicdiversity of Casuarina, we sequenced the genomes and constructed de novo genome assemblies of thethree most widely planted Casuarina species: C. equisetifolia, C. glauca, and C. cunninghamiana. We gener?ated chromosome-scale genome sequences using both Pacific Biosciences (PacBio) Sequel sequencing andchromosome conformation capture technology (Hi-C). The total genome sizes for C. equisetifolia, C. glauca,and C. cunninghamiana are 268 942 579 bp, 296 631 783 bp, and 293 483 606 bp, respectively, of which25.91, 27.15, and 27.74% were annotated as repetitive sequences. We annotated 23 162, 24 673, and 24 674protein-coding genes in C. equisetifolia, C. glauca, and C. cunninghamiana, respectively. We then collectedbranchlets from male and female individuals for whole-genome bisulfite sequencing (BS-seq) to explore theepigenetic regulation of sex determination in these three species. Transcriptome sequencing (RNA-seq)revealed differential expression of phytohormone-related genes between male and female plants. In sum?mary, we generated three chromosome-level genome assemblies and comprehensive DNA methylation andtranscriptome datasets from both male and female material for three Casuarina species, providing a basisfor the comprehensive investigation of genomic diversity and functional gene discovery of Casuarina in the future.. Please cite following reference if you use this dataset in your study:Zhang, Y., Wei, Y., Meng, J., Wang, Y., Nie, S., Zhang, Z., ... & Gu, L. (2023). Chromosome‐scale de novo genome assembly and annotation of three representative Casuarina species: C. equisetifolia, C. glauca, and C. cunninghamiana. <i>The Plant Journal</i>, <i>114</i>(6), 1490-1505.All suggestions are welcome to lfgu@fafu.edu.cn
DOI: 10.5517/ccdc.csd.cc2dkygd
title: CCDC 2221784: Experimental Crystal Structure Determination

description: Related Article: Mohamed Salem|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f3rr2
title: CCDC 2237944: Experimental Crystal Structure Determination

description: Related Article: Karolina Kamińska, Dominika Iwan, Jakub Trojnar, Marek Daszkiewicz, Joanna Rode, Jacek Wojaczynski, Elżbieta Wojaczyńska|2023|CSD Communication|||
description: Related Article: Karolina Kamińska, Dominika Iwan, Jakub Trojnar, Marek Daszkiewicz, Joanna E. Rode, Jacek Wojaczyński, Elżbieta Wojaczyńska|2023|Org.Biomol.Chem.|21|9182|doi:10.1039/D3OB01454A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f3rs3
title: CCDC 2237945: Experimental Crystal Structure Determination

description: Related Article: Karolina Kamińska, Dominika Iwan, Jakub Trojnar, Marek Daszkiewicz, Joanna Rode, Jacek Wojaczynski, Elżbieta Wojaczyńska|2023|CSD Communication|||
description: Related Article: Karolina Kamińska, Dominika Iwan, Jakub Trojnar, Marek Daszkiewicz, Joanna E. Rode, Jacek Wojaczyński, Elżbieta Wojaczyńska|2023|Org.Biomol.Chem.|21|9182|doi:10.1039/D3OB01454A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.