cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.jg470
title: Data from: Too hot to die? The effects of vegetation shading on past, present, and future activity budgets of two diurnal skinks from arid Australia

description: Behavioral thermoregulation is an important mechanism allowing ectotherms
 to respond to thermal variations. Its efficiency might become imperative
 for securing activity budgets under future climate change. For diurnal
 lizards, thermal microhabitat variability appears to be of high
 importance, especially in hot deserts where vegetation is highly scattered
 and sensitive to climatic fluctuations. We investigated the effects of a
 shading gradient from vegetation on body temperatures and activity timing
 for two diurnal, terrestrial desert lizards, Ctenotus regius, and Morethia
 boulengeri, and analyzed their changes under past, present, and future
 climatic conditions. Both species’ body temperatures and activity timing
 strongly depended on the shading gradient provided by vegetation
 heterogeneity. At high temperatures, shaded locations provided cooling
 temperatures and increased diurnal activity. Conversely, bushes also
 buffered cold temperature by saving heat. According to future climate
 change scenarios, cooler microhabitats might become beneficial to
 warm-adapted species, such as C. regius, by increasing the duration of
 daily activity. Contrarily, warmer microhabitats might become unsuitable
 for less warm-adapted species such as M. boulengeri for which midsummers
 might result in a complete restriction of activity irrespective of
 vegetation. However, total annual activity would still increase provided
 that individuals would be able to shift their seasonal timing towards
 spring and autumn. Overall, we highlight the critical importance of
 thermoregulatory behavior to buffer temperatures and its dependence on
 vegetation heterogeneity. Whereas studies often neglect ecological
 processes when anticipating species’ responses to future climate change
 the strongest impact of a changing climate on terrestrial ectotherms in
 hot deserts is likely to be the loss of shaded microhabitats rather than
 the rise in temperature itself. We argue that conservation strategies
 aiming at addressing future climate changes should focus more on the
 cascading effects of vegetation rather than on shifts of species
 distributions predicted solely by climatic envelopes.
description: Opertative and
 environmental temperaturesThis Excel-file contains
 operative and environmental data for the two skink species, M. boulengeri
 and C. regius, in Kinchega National Park, Australia, which were used for
 the analyses.Opertative-temperatures.xlsx
DOI: 10.5061/dryad.4g8b7
title: Data from: Individual recognition of opposite sex vocalizations in the zebra finch

description: Individual vocal recognition plays an important role in the social lives
 of many vocally active species. In group-living songbirds the most common
 vocalizations during communal interactions are low-intensity, soft,
 unlearned calls. Being able to tell individuals apart solely from a short
 call would allow a sender to choose a specific group member to address,
 resulting in the possibility to form complex communication networks.
 However, little research has yet been carried out to discover whether soft
 calls contain individual identity. In this study, males and females of
 zebra finch pairs were tested with six vocalization types - four different
 soft calls, the distance call and the male song - to investigate whether
 they are able to distinguish individuals of the opposite sex. For both
 sexes, we provide the first evidence of individual vocal recognition for a
 zebra finch soft unlearned call. Moreover, while controlling for
 habituation and testing for repeatability of the findings, we quantify the
 effects of hitherto little studied variables such as partners’ vocal
 exchange previous to the experiment, spectral content of playback calls
 and quality of the answers. We suggest that zebra finches can recognize
 individuals via soft vocalizations, therefore allowing complex directed
 communication within vocalizing flocks.
description: .wav files used for
 playbacksHere you find every .wav
 file that was used for the playback experiment in the two
 trials.wav_files_playback.tarbaseline vs. experiment comparisonFile containing the proportion of 'stack' calls used as answer during the baseline recordings and both experimental trials.stack_stack_baseline_data.tarTypes of calls used as anwersEach row contains numbers and proportion of answers for each call type by series. Each answer type, number and proportion has a dedicated column. When the number of answers wasn't higher than 5, NA was inserted (see methods).types_of_answers_proportion_m_f.tarLatency dataHere you find the data for: 1- the latency analysis for the complete playback series, 2- the supplementary analysis of the latency for the first 30 calls of the playback series and 3- the supplementary analysis of the latency for the last 30 calls of each playback series.m_f_latencies_data.tarNumber of answers dataHere you find the data for: 1 - the total answers analysis for the complete playback series, 2- the supplementary analysis of the number of answers during the first 30 calls of the playback series and 3 - the supplementary analysis of the number of answers during the last 30 calls of the playback seriesm_f_n_calls_data.tar
DOI: 10.17632/4yjt65d2xs
title: Presence of blood-sucking insects and other arthropods affecting dogs in the tropics

description: The objective of this study was to determine the abundance of hematophagous arthropods that feed on dogs and other arthropods that come into contact during the year in a subtropical rural, a transition zone and an urban area of Yucatan, México, using an alternative collection method based on treatment of dogs with fipronil-permethrin as live bait
DOI: 10.34740/kaggle/dsv/14638558
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.17632/4yjt65d2xs.1
title: Presence of blood-sucking insects and other arthropods affecting dogs in the tropics

description: The objective of this study was to determine the abundance of hematophagous arthropods that feed on dogs and other arthropods that come into contact during the year in a subtropical rural, a transition zone and an urban area of Yucatan, México, using an alternative collection method based on treatment of dogs with fipronil-permethrin as live bait
DOI: 10.5061/dryad.4m3r4
title: Data from: Archipelagic genetics in a widespread Caribbean anole

description: Aim We examine the influence of fluctuating sea levels in a land-bridge
 archipelago on the apportioning of intraspecific genetic diversity and
 divergence in the widespread Puerto Rican crested anole (Anolis
 cristatellus). We compare three alternative scenarios for genetic
 diversification in an archipelagic species that contrast the relative
 influences of periodic isolation versus island connectedness driven by
 fluctuating sea levels. Our approach combines information from geography
 and population genetics to assess the influence of island size, island
 isolation, island historical geography, and population genetic processes
 such as drift on the contemporary distribution of genetic variation within
 and among islands. Location The Puerto Rico Bank in the Caribbean focusing
 primarily on the Spanish, British and U.S. Virgin Islands. Methods We used
 nuclear and mitochondrial DNA sequences and microsatellite genotypes
 sampled from A. cristatellus populations to investigate: 1) the
 broad-scale pattern of phylogeographic divergence across Puerto Rico Bank
 islands; and 2) diversification within the Virgin Islands archipelago. For
 the first component, we used sequence data to reconstruct the
 relationships among 542 samples from across the species’ range. For the
 second component, we examined the relative influences of island size,
 isolation, and population genetic processes on the distribution of genetic
 diversity across the Virgin Islands. Results In the Virgin Islands, A.
 cristatellus is represented by a monophyletic clade except on the island
 of Vieques, where two divergent clades coexist. We found evidence for
 non-equilibrium dynamics in the Virgin Islands, suggesting spatial
 population expansion during intraglacial periods of low sea level. Main
 conclusions We found limited evidence that periods of island isolation
 affected patterns of genetic diversity and differentiation. Instead, we
 found that the patterns of genetic diversity and divergence in A.
 cristatellus in the Virgin Islands archipelago are likely shaped by
 long-term persistence in the region and periods of population spatial
 expansion.
description: Acristatellus_alignmentalignment for mtDNA ND2 locusFigS1expanded version of Fig. S1FigS1_TreefileTreefile (.nex) for Figure S1FigS1.nexFigS2_TreefileTreefile for Figure S2FigS2.nex
DOI: 10.5061/dryad.8jf4q
title: Data from: Tree functional diversity affects litter decomposition and arthropod community composition in a tropical forest

description: Disturbance can alter tree species and functional diversity in tropical
 forests, which in turn could affect carbon and nutrient cycling via the
 decomposition of plant litter. However, the influence of tropical tree
 diversity on forest floor organisms and the processes they mediate are far
 from clear. We investigated the influence of different litter mixtures on
 arthropod communities and decomposition processes in a 60-year-old lowland
 tropical forest in Panama, Central America. We used litter mixtures
 representing pioneer and old growth tree species in experimental mesocosms
 to assess the links between litter types, decomposition rates, and litter
 arthropod communities. Overall, pioneer species litter decomposed most
 rapidly and old growth species litter decomposed the slowest but there
 were clear non-additive effects of litter mixtures containing both
 functional groups. We observed distinct arthropod communities in different
 litter mixtures at 6 mo, with greater arthropod diversity and abundance in
 litter from old growth forest species. By comparing the decay of different
 litter mixtures in mesocosms and conventional litterbags, we demonstrated
 that our mesocosms represent an effective approach to link studies of
 litter decomposition and arthropod communities. Our results indicate that
 changes in the functional diversity of litter could have wider
 implications for arthropod communities and ecosystem functioning in
 tropical forests.
description: ALL DATA
 ARTHROArthropods collected at
 3 monthsALL DATA
 ARTHRO2Arthropods collected at
 6 monthsData for R Mesos and
 BagsWeight of the litter
 from the mesocosms and the litter bagsCOMPLETE MESO
 DATA_07_01_16_cleanData collected from the
 mesocosms at 3 and 6 monthsArthroAll2Arthropod data used for the multivarient analysis
DOI: 10.5061/dryad.7p511
title: Data from: Early-branching euteleost relationships: areas of congruence between concatenation and coalescent model inferences

description: Phylogenetic inference based on evidence from DNA sequences has led to
 significant strides in the development of a stable and robustly supported
 framework for the vertebrate tree of life. To date, the bulk of those
 advances have relied on sequence data from a small number of genome
 regions that have proven unable to produce satisfactory answers to
 consistently recalcitrant phylogenetic questions. Here, we re-examine
 phylogenetic relationships among early-branching euteleostean fish
 lineages classically grouped in the Protacanthopterygii using DNA sequence
 data surrounding ultraconserved elements. We report and examine a dataset
 of thirty-four OTUs with 17,957 aligned characters from fifty-three
 nuclear loci. Phylogenetic analysis is conducted in concatenated, joint
 gene trees and species tree estimation and summary coalescent frameworks.
 All analytical frameworks yield supporting evidence for existing
 hypotheses of relationship for the placement of Lepidogalaxias
 salamandroides, monophyly of the Stomiatii and the presence of an
 esociform + salmonid clade. Lepidogalaxias salamandroides and the
 Esociformes + Salmoniformes are successive sister lineages to all other
 euteleosts in the majority of analyses. The concatenated and joint gene
 trees and species tree analysis types produce high support values for this
 arrangement. However, inter-relationships of Argentiniformes, Stomiatii
 and Neoteleostei remain uncertain as they varied by analysis type while
 receiving strong and contradictory indices of support. Topological
 differences between analysis types are also apparent within the otomorph
 and the percomorph taxa in the data set. Our results identify concordant
 areas with strong support for relationships within and between
 early-branching euteleost lineages but they also reveal limitations in the
 ability of larger datasets to conclusively resolve other aspects of that
 phylogeny.
description: Alignment and
 PartitionAlignment of 53
 ultra-conserved element loci analyzed in the paper with a RAxML style
 partition file.AssembliesNewly generated assemblies from sequence capture data targeting 500 ultra-conserved element loci.PartitionFinderPartition Finder configuration file and partitioning scheme as described in the manuscript.
DOI: 10.15468/ykqd5b
title: Abildsø - våtmark og torvmark

description: Artsfunn fra feltbefaring av våtmark og torvmarksskog ved Abildsø, Oslo kommune. Multimediefilen inneholder én-til-mange-lenker til bilder for hver post i forekomstfilen (når tilgjengelig)
DOI: 10.17632/whpzf6kgsr
title: Terminologia especializada da enfermagem obstétrica para o processo de parto

description: Estudo metodológico, desenvolvido em duas etapas: 1) identificação dos conceitos relativos ao cuidado no processo de parto presentes em entrevistas semiestruturadas realizadas com enfermeiras obstetras que atuam no parto e nascimento; 2) mapeamento cruzado dos conceitos extraídos com os conceitos primitivos da CIPE® 2019-2020. Os dados foram analisados consoante os conceitos da Teoria Humanística e o modelo de sete eixos. O estudo teve como objetivo construir uma terminologia especializada da enfermagem obstétrica para o cuidado no processo de parto fundamentada na teoria de enfermagem humanística. Foram identificados e mapeados 280 termos, estruturados no modelo de sete eixos; destes 150 constavam na CIPE® e 130 novos. A terminologia resultante foi alinhada aos conceitos da teoria, com expressividade no conceito de enfermagem fenomenológica seguido de diálogo e comunidade.
DOI: 10.5061/dryad.v4q83
title: Data from: Discovery and characterization of single nucleotide polymorphisms in two anadromous alosine fishes of conservation concern

description: Freshwater habitat alteration and marine fisheries can affect anadromous
 fish species, and populations fluctuating in size elicit conservation
 concern and coordinated management. We describe the development and
 characterization of two sets of 96 single nucleotide polymorphism (SNP)
 assays for two species of anadromous alosine fishes, alewife and blueback
 herring (collectively known as river herring), that are native to the
 Atlantic coast of North America. We used data from high-throughput DNA
 sequencing to discover SNPs and then developed molecular genetic assays
 for genotyping sets of 96 individual loci in each species. The two sets of
 assays were validated with multiple populations that encompass both the
 geographic range and the known regional genetic stocks of both species.
 The SNP panels developed herein accurately resolved the genetic stock
 structure for alewife and blueback herring that was previously identified
 using microsatellites and assigned individuals to regional stock of origin
 with high accuracy. These genetic markers, which generate data that are
 easily shared and combined, will greatly facilitate ongoing conservation
 and management of river herring including genetic assignment of marine
 caught individuals to stock of origin.
description: Alewife SNP
 genotypesAlewife SNP
 genotypes-twocolumnformatALEVAL323_93_twocolumn.txtBlueback Herring SNP genotypesBlueback Herring SNP genotypes-twocolumn formatBBH_VAL_431_96_twocolumn.txtAlewife FASTA fileFASTA file with consensus sequences from all alewife ddRAD loci with at least one SNPalewife_batch_1.faBlueback Herring FASTA fileFASTA file with consensus sequences from all Blueback Herring ddRAD loci with at least one SNPblueback_batch_1.faAlewife haplotypesAlewife haplotype calls from all combinations of locus and individual.alewife_batch_1.haplotypes.tsvBlueback herring haplotypesBlueback herring haplotype calls from all combinations of locus and individual.blueback_batch_1.haplotypes.tsvREADMEREADME file
DOI: 10.17632/whpzf6kgsr.2
title: Terminologia especializada da enfermagem obstétrica para o processo de parto

description: Estudo metodológico, desenvolvido em duas etapas: 1) identificação dos conceitos relativos ao cuidado no processo de parto presentes em entrevistas semiestruturadas realizadas com enfermeiras obstetras que atuam no parto e nascimento; 2) mapeamento cruzado dos conceitos extraídos com os conceitos primitivos da CIPE® 2019-2020. Os dados foram analisados consoante os conceitos da Teoria Humanística e o modelo de sete eixos. O estudo teve como objetivo construir uma terminologia especializada da enfermagem obstétrica para o cuidado no processo de parto fundamentada na teoria de enfermagem humanística. Foram identificados e mapeados 280 termos, estruturados no modelo de sete eixos; destes 150 constavam na CIPE® e 130 novos. A terminologia resultante foi alinhada aos conceitos da teoria, com expressividade no conceito de enfermagem fenomenológica seguido de diálogo e comunidade.
DOI: 10.5061/dryad.vk224
title: Data from: Explaining ecological shifts: the roles of temperature and primary production in the long-term dynamics of benthic faunal composition

description: Predicting the ecological consequences of environmental change requires
 that we can identify the drivers of long-term ecological variation.
 Biological assemblages can exhibit abrupt deviations from temporal trends,
 potentially resulting in irreversible shifts in species composition over
 short periods of time. Such dynamics are hypothesised to occur as gradual
 forcing eventually causes biological thresholds to be crossed, but could
 also be explained by biota simply tracking abrupt changes to their
 environment. Here, we modelled temporal variation in a North Sea benthic
 faunal assemblage over a 40-year period (1972–2012) to test for changes to
 temporal trends of biota and determine whether they could be explained by
 underlying patterns in sea temperature and primary production. These
 extrinsic factors were postulated to influence community dynamics through
 their roles in determining and sustaining the metabolic demands of
 organisms, respectively. A subset of mainly large and long-lived taxa
 (those loaded on the first principal component of taxa densities)
 exhibited two significant changes to their temporal trends, which
 culminated in a shift in assemblage composition. These changes were
 explained by an increase in pelagic primary production, and hence detrital
 food input to the seabed, but were unrelated to variation in sea
 temperature. A second subset of mainly small and short-lived taxa (those
 loaded on the second principal component) did not experience any
 significant changes to their temporal trends, as enhanced pelagic primary
 production appeared to mitigate the impact of warming on these organisms.
 Our results suggest that abrupt ecological shifts can occur as biota track
 underlying variation in extrinsic factors, in this case primary
 production. Changes to the structure of ecosystems may therefore be
 predictable based on environmental change projections.
description: Time series: benthic
 taxa abundance data for Dove Station M1 (1972-2012)This file contains data
 on the abundances (per square metre) of benthic macroinfaunal taxa sampled
 at Dove Station M1 in the central-western North Sea, 10.5 km east of the
 Northumberland coast. These data were used to derive the principal
 components analysed in the paper 'Explaining ecological shifts: The
 roles of temperature and primary production in the long-term dynamics of
 benthic faunal composition' by Clare et al. The time series runs from
 autumn 1972 to autumn 2012. Samples were collected in the spring and
 autumn of each year, with few exceptions. All taxa that occurred at a
 density of ten or more individuals per square metre, at any single
 sampling occasion, are included in this data set.Benthic taxa abundance data
 Dove Station M1 (1972-2012).csv
DOI: 10.5061/dryad.150
title: Data from: Darwin's finches: an essay on the general biological theory of evolution

description: [No abstract entered]
description: Morphological
 Measurements of Galapagos FinchesOver 6500 specimens that
 were measured by David Lack. These data were transcribed from records
 deposited at the California Academy of Sciences.morphLack.TABmorphLack.xls
DOI: 10.5061/dryad.9jg34
title: Data from: Herbivores alter plant-wind interactions by acting as a point mass on leaves and by removing leaf tissue

description: In nature, plants regularly interact with herbivores and with wind.
 Herbivores can wound and alter the structure of plants, whereas wind can
 exert aerodynamic forces that cause the plants to flutter or sway. While
 herbivory has many negative consequences for plants, fluttering in wind
 can be beneficial for plants by facilitating gas exchange and loss of
 excess heat. Little is known about how herbivores affect plant motion in
 wind. We tested how the mass of an herbivore resting on a broad leaf of
 the tulip tree Liriodendron tulipifera, and the damage caused by
 herbivores, affected the motion of the leaf in wind. For this, we placed
 mimics of herbivores on the leaves, varying each herbivore's mass or
 position, and used high-speed video to measure how the herbivore mimics
 affected leaf movement and reconfiguration at two wind speeds inside a
 laboratory wind tunnel. In a similar setup, we tested how naturally
 occurring herbivore damage on the leaves affected leaf movement and
 reconfiguration. We found that the mass of an herbivore resting on a leaf
 can change that leaf's orientation relative to the wind and interfere
 with the ability of the leaf to reconfigure into a smaller, more
 streamlined shape. A large herbivore load slowed the leaf's
 fluttering frequency, while naturally occurring damage from herbivores
 increased the leaf's fluttering frequency. We conclude that
 herbivores can alter the physical interactions between wind and plants by
 two methods: (1) acting as a point mass on the plant while it is feeding
 and (2) removing tissue from the plant. Altering a plant's
 interaction with wind can have physical and physiological consequences for
 the plant. Thus, future studies of plants in nature should consider the
 effect of herbivory on plant–wind interactions, and vice versa.
description: Herbivore load
 resultsspreadsheet of results
 for experiments that added a point mass to leaves in wind. All position
 and size data are given in cm, and masses are in grams.Herbivore position
 resultsSpreadsheet of results
 for experiment that manipulated the positiin of a point mass on leaves in
 wind. All position and size data are given in cm, and masses are in
 grams.Herbivore damage
 resultsSpreadsheet if results
 for experiment that compared fluttering of damaged and undamaged leaves in
 wind. All position and size data are given in cm, and masses are in
 grams.Herbivore load
 experiment_Raw data filesRaw data files for
 experiment that added a point mass to leaves in wind. All position and
 size data are given in cm, and masses are in grams.Herbivore position
 experiment_Raw data filesRaw data for experiment
 that manipulated the position of a point mass on leaves in wind. All
 position and size data are given in cm, and masses are in
 grams.Herbivore damage
 experiment_Raw data filesRaw data for experiment
 that compared flutter between damaged and undamaged leaves in wind. All
 position and size data are given in cm, and masses are in
 grams.