cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.jd493k
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Larrea ameghinoi"
 ]
}

 The dataset includes 45 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086326-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5cvnwr
title: Occurrence Download

description: A dataset containing 200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fucus evanescens",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 200 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086324-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16273367
title: Supplementary data to the article 'Using archaeological road data to evaluate limits of topography on road location: Roman roads in the Near East as a test case'

description: Supplementary data to the article 'Using archaeological road data to evaluate limits of topography on road location'

Author: Adam Pažout

For more detailed description and methodology, please consult the article.

Files contained:

1) levant_FABDEM_30m.tif

Digital Elevation Model (DEM) derived from FABDEM (https://doi.org/10.5523/bris.s5hqmjcdj8yo2ibzi9b4ew3sn) for the region of interest and clipped to the coastline.

2) levant_tpi_r33.tif

Topographic position index calculated in neighbourhood of radius = 33 cells over levant_FABDEM_30m.tif.

3) levant_rug_c3.tif

Vector ruggedness measure local (Dilts et al 2023, https://doi.org/10.1007/s10980-023-01646-6) calculated for 3x3 cell neighbourhood over levant_FABDEM_30m.tif.

4) fete_lcps_levant.tif

Raster layer with all calculated FETE LCPs aggregated in 1,000 m neighbourhood, showing frequency of LCPs crossing each raster cell in the region of interest.

5) fete_lcps_south_levant.tif

Raster layer with all calculated FETE LCPs aggregated in 1,000 m neighbourhood, showing frequency of LCPs crossing the each raster cell in the case study in the southern Levant.

6) levant_roads_analysed.shp

Polyline shapefile containing all 'Certain' Roman road segments in the region of interest, adapted from Itiner-e: atlas of ancient roads (https://itiner-e.org/). Values of average slope (Avg_Slope), maximum slope (Max_Slope), average slope degrees (av_slope_d), maximum slope degrees (mx_slope_d), minimum, maximum and mean TPI (tpi_r33_mi, tpi_r33 _ma, tpi_r33_me, minimum, maximum and mean VRML (vrml_min, vrml_mmax, vrml_mean) are stored in the attribute table in the columns whose name is indicated in parenthesis.

 

Output of the project

VIA-TARIQ: Analysing the long-term change and persistency of the Roman road system in the Levant

This project has received funding from the European Union’s Horizon Europe research and innovation programme under the Marie Sklodowska-Curie grant agreement No 101151931
DOI: 10.15468/efyf5n
title: Distribution of flies of medical importance in Thailand

description: Flies are common insects found throughout Thailand, comprising both biting and non-biting species. Some of these species have significant implications for human and animal health, as they are capable of transmitting infectious diseases. Non-biting flies are known to process the mechanical transmission of pathogens via their body surfaces and are also considered nuisance pests. In contrast, biting flies can act as biological vectors, transmitting pathogens through their blood-feeding behavior. Understanding the spatial distribution of flies is essential for developing effective fly control strategies and reducing the risk of disease transmission.

This dataset, which documents the distribution of flies in Thailand from 2004 to 2024, includes a total of 3,501 records spanning seven identified families: Calliphoridae, Ceratopogonidae, Muscidae, Psychodidae, Sarcophagidae, Simuliidae, and Tabanidae. Each record comprises information across three primary categories: (i) Taxonomy – including scientific name, kingdom, phylum, class, order, family, genus, specific epithet, scientific name authorship, and taxon rank; (ii) Collection details – including event ID, occurrence ID, event date, and sampling protocol; (iii) Geolocation data – including county, country code, locality, location ID, decimal latitude, decimal longitude, and geodetic datum.

An overview of the dataset is presented through four summary tables. Table 1 displays the total number of collected fly specimens, organized by family. The most frequently recorded family is Simuliidae, which accounts for 52.16% of all entries. Table 2 presents the total number of collected flies classified by type—biting or non-biting—and further categorized by family. Biting flies represent the majority, comprising 65.67% of all specimens. Within this group, Simuliidae is the most prevalent family (79.43%), while Calliphoridae is the most dominant among non-biting flies (58.90%). Table 3 illustrates the geographic distribution of biting and non-biting flies across different regions of Thailand. Notably, the Central region is the only area where non-biting flies outnumber biting flies. Table 4 summarizes the number of specimens collected using different sampling methods, and the manual collection by forceps yields the highest number of specimens overall.
DOI: 10.15468/dl.s2gsmp
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Allamanda cathartica",
 "Country is Gabon",
 "HasCoordinate is true"
 ]
}

 The dataset includes 19 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078539-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id47305.1
title: StrainInfo SI-ID 47305.1

description: StrainInfo dataset 47305 about a strain of Xanthomonas campestris. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id47306.1
title: StrainInfo SI-ID 47306.1

description: StrainInfo dataset 47306 about a strain of Methanothermobacter thermautotrophicus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id47307.1
title: StrainInfo SI-ID 47307.1

description: StrainInfo dataset 47307 about a strain of Streptomyces griseus subsp. griseus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id47308.1
title: StrainInfo SI-ID 47308.1

description: StrainInfo dataset 47308 about a strain of Bacillus amyloliquefaciens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id47367.1
title: StrainInfo SI-ID 47367.1

description: StrainInfo dataset 47367 about a strain of Escherichia coli. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id47368.1
title: StrainInfo SI-ID 47368.1

description: StrainInfo dataset 47368 about a strain of Methylorubrum extorquens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id47369.1
title: StrainInfo SI-ID 47369.1

description: StrainInfo dataset 47369 about a strain of Paenibacillus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id47370.1
title: StrainInfo SI-ID 47370.1

description: StrainInfo dataset 47370 about a strain of Bacillus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.sz6pf9
title: Occurrence Download

description: A dataset containing 510925 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Ireland, Svalbard and Jan Mayen, Portugal, Spain, France, Germany, Belgium, Netherlands, Denmark, Estonia, Latvia, Lithuania, Italy, Greece, Cyprus, Türkiye, Russian Federation, Ukraine, Romania, Bulgaria, Albania, Croatia, Austria, Poland, Slovakia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acer pseudoplatanus L."
 ]
}

 The dataset includes 510925 records from 2223 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079431-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/q2a-xds-hnq
title: †Pseudochrysalidina floridana Cole, 1941

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yhs-cg4-6sj
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hdy-ll9-8dl
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pem-7c2-8k4
title: †Lepidorbitoides socialis (Leymerie, 1851)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j4q-345-zzz
title: †Sirtina orbitoidiformis Brönnimann & Wirz, 1962

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jdg-yjb-hrb
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0b2-6n6-90l
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e15-nz7-6mh
title: Globorotalia Cushman, 1927

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v9z-zzr-17h
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/54g-h89-dgh
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ash-3aa-5sz
title: Textularia Defrance, 1824

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cvd-dbm-h7r
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.yaq4c3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oxytoxum biconicum",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020396-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/37f-8qt-k1x
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cnz-vk7-n5e
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9ve-dlt-flh
title: Reophax Montfort, 1808

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n67-r1w-1ne
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.4f9rna
title: Occurrence Download

description: A dataset containing 1484 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arundo donax",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1484 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020395-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/8nf-67j-1x5
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a7k-403-jn7
title: Heteroschismoides Ludbrook, 1960

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jt2-w29-let
title: Amphistegina d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y1e-q6x-nqn
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hvt-4r0-kmf
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lhr-qzj-gnr
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ppy-msj-bg7
title: Nummulitidae Blainville, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m7h-jvv-cta
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z35-r87-al2
title: Foraminifera d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/45w-zht-zjj
title: Bos taurus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m06-jh5-fh7
title: Cythereis Jones, 1849

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5k2-gm0-axl
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jff-2dj-mv8
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t1p-pd4-dcp
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/17a-jts-x88
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mmh-n99-a9e
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6vk-4zh-6dx
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ps6-k3d-dmd
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w74-1m8-mta
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15156/bio/sh1413366.10fu
title: SH1413366.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.yh9pp7
title: Occurrence Download

description: A dataset containing 531490 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Greece",
 "Year is 2024"
 ]
}

 The dataset includes 531490 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006311-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1413367.10fu
title: SH1413367.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1413375.10fu
title: SH1413375.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1413376.10fu
title: SH1413376.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1413381.10fu
title: SH1413381.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1413382.10fu
title: SH1413382.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.