cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17182/hepdata.166010.v1/t36
title: "Theoretical cross sections for stau pair production" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: Theoretical cross sections at NLO+NLL accuracy for stau pair production.
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.
DOI: 10.17182/hepdata.166010.v1/t37
title: "Signal cutflows" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: Signal yields in the maximally mixed scenario for the BR selections, for a few representative sets of $(m_{\tilde{\tau}} [\text{GeV}], c\tau_{0} [\text{mm}])$ values
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.
DOI: 10.5061/dryad.g8h4s
title: Data from: Do group dynamics affect colour morph clines during a range shift?

description: Species exhibiting colour-polymorphism are thought to have an ecological
 advantage at the landscape scale, because spatial segregation of
 alternatively-adapted ecotypes into diverse habitats can increase the
 total species’ niche breadth and thus confer greater geographic range
 size. However, morph frequencies are also influenced by intra-populational
 processes such as frequency- or density-dependent social interactions. To
 identify how social feedback may affect clinal variation in morph
 frequencies, we investigated reciprocal interactions between
 morph-specific thermal tolerance, local climatic conditions, and social
 environments, in the context of a colour-morph frequency cline associated
 with a recent range expansion in blue-tailed damselflies (Ischnura
 elegans) in Sweden. Cold tolerances of gynochromes (female-like female
 morph) were positively correlated with local gynochrome frequencies,
 suggesting a positive frequency-dependent fitness benefit of being common.
 In contrast, androchrome (male-mimic female morph) cold tolerances were
 improved following recent exposure to cold weather, suggesting a
 beneficial environmental acclimation effect. Thus according to an
 environment-matching hypothesis for clinal variation, androchrome
 frequencies should therefore increase towards the (cooler) range limit. In
 contrast to this prediction, gynochrome frequencies increased at the
 expanding range limit, consistent with a positive frequency-dependent
 social feedback when invading novel climates. Our results suggest that
 when phenotypes or fitnesses are affected by interactions with
 conspecifics, beneficial social effects on environmental tolerances may i)
 facilitate range shifts and ii) reverse or counteract typical patterns of
 intraspecific interactions and environment-matching clines observed in
 stable populations observed over broader geographic scales.
description: Table S1 from 'Do
 group dynamics affect colour morph clines during a range
 shift?'Colour morph
 frequencies, population densities, and sex ratios for populations of the
 blue-tailed damselfly (Ischnura elegans) located at the range expansion
 front, and ~ 500 km back from the expansion front. Please refer to the
 associated publication for further details.Table
 S1.csv
DOI: 10.5061/dryad.208ht
title: Data from: Birt-Hogg-Dube syndrome prospectively detected by review of chest computed tomography scans

description: Purpose: Birt-Hogg-Dube syndrome (BHD) is a rare disorder caused by
 mutations in the gene that encodes folliculin (FLCN) and is inherited in
 an autosomal dominant manner. BHD is commonly accompanied by
 fibrofolliculomas, renal tumors, multiple pulmonary cysts, and spontaneous
 pneumothorax. The aim of this study was to detect BHD prospectively in
 patients undergoing chest computed tomography (CT) scans and to evaluate
 further the characteristics of BHD in Korea. Methods: We prospectively
 checked and reviewed the chest CT scans obtained for 10,883 patients at
 Gangnam Severance Hospital, Seoul, Korea, from June 1, 2015 to May 31,
 2016. Seventeen patients met the study inclusion criteria and underwent
 screening for FLCN mutation to confirm BHD. We analyzed the
 characteristics of the patients confirmed to have BHD and those for a
 further 6 patients who had previously been described in Korea. Results:
 Six (0.06%) of the 10,883 patients reviewed were diagnosed with BHD. There
 was no difference in demographic or clinical features between the patients
 with BHD (n=6) and those without BHD (n=11). Pneumothorax was present in
 50% of the patients with BHD but typical skin and renal lesions were
 absent. The maximum size of the cysts in the BHD group (median 39.4 mm;
 interquartile range [IQR] 11.4 mm) was significantly larger than that in
 the non-BHD group (median 15.8 mm; IQR 7.8 mm; P = 0.001). Variable
 morphology was seen in 100.0% of the cysts in the BHD group but in only
 18.2% of the cysts in the non-BHD group (P = 0.002). Nine (95%) of the
 total of 12 Korean patients with BHD had experienced pneumothorax. Typical
 skin and renal lesions were present in 20.0% of patients with BHD.
 Conclusions: Our findings suggest that BHD can be detected if chest CT
 scans are read in detail.
description: BHD_demographicsBHD_CT finding
DOI: 10.5061/dryad.23gp4
title: Data from: Dominance of Endozoicomonas bacteria throughout coral bleaching and mortality suggests structural inflexibility of the Pocillopora verrucosa microbiome

description: The functional importance of Symbiodinium algal endosymbionts and a
 diverse suite of bacteria for coral holobiont health and functioning is
 widely acknowledged. Yet, we know surprisingly little about microbial
 community dynamics and the stability of host-microbe associations under
 adverse environmental conditions. To gain insight into the stability of
 coral host-microbe associations and holobiont structure, we assessed
 changes in the community structure of Symbiodinium and bacteria associated
 with the coral Pocillopora verrucosa under excess organic nutrient
 conditions. Pocillopora-associated microbial communities were monitored
 over 14 days in two independent experiments. We assessed the effect of
 excess dissolved organic nitrogen (DON) and excess dissolved organic
 carbon (DOC), the latter which was published recently. Exposure to excess
 nutrients rapidly affected coral health, resulting in two distinct stress
 phenotypes: coral bleaching under excess DOC on the one hand and severe
 tissue sloughing (&gt; 90 % tissue loss resulting in host mortality)
 under excess DON. These phenotypes were accompanied by structural changes
 in the Symbiodinium community. In contrast, the associated bacterial
 community remained remarkably stable and was dominated by two
 Endozoicomonas phylotypes, comprising on average 90 % of bacterial
 sequences. This dominance of Endozoicomonas even under conditions of coral
 bleaching and mortality suggests the bacterial community of P. verrucosa
 may be rather inflexible, and thereby unable to respond or acclimatize to
 rapid changes in the environment, contrary to what was previously observed
 in other corals. In this light, our results add important detail to our
 understanding of the structural flexibility and stability of the coral
 holobiont. Coral holobionts might occupy structural landscapes ranging
 from highly flexible to rather inflexible with consequences for their
 ability to respond to environmental change.
description: Symbiodinium response
 parametersOverview of Symbiodinium
 response paramters (density, chl content, relative clade community
 composition) for both experiments. Data were obtained using flow cytometry
 (density & chl) and MiSeq sequencing (ITS Symbiodinium sequence
 composition). All units are identical to those reported in the
 manuscript.POGOREUTZ_ECE_Datadryad.csv
DOI: 10.5061/dryad.7h480
title: Data from: Reducing wildlife damage with cost-effective management programmes

description: Limiting the impact of wildlife damage in a cost effective manner requires
 an understanding of how control inputs change the occurrence of damage
 through their effect on animal density. Despite this, there are few
 studies linking wildlife management (control), with changes in animal
 abundance and prevailing levels of wildlife damage. We use the impact and
 management of wild pigs as a case study to demonstrate this linkage.
 Ground disturbance by wild pigs has become a conservation issue of global
 concern because of its potential effects on successional changes in
 vegetation structure and composition, habitat for other species, and
 functional soil properties. In this study, we used a 3-year pig control
 programme (ground hunting) undertaken in a temperate rainforest area of
 northern New Zealand to evaluate effects on pig abundance, and patterns
 and rates of ground disturbance and ground disturbance recovery and the
 cost effectiveness of differing control strategies. Control reduced pig
 densities by over a third of the estimated carrying capacity, but more
 than halved average prevailing ground disturbance. Rates of new ground
 disturbance accelerated with increasing pig density, while rates of ground
 disturbance recovery were not related to prevailing pig density.
 Stochastic simulation models based on the measured relationships between
 control, pig density and rate of ground disturbance and recovery indicated
 that control could reduce ground disturbance substantially. However, the
 rate at which prevailing ground disturbance was reduced diminished rapidly
 as more intense, and hence expensive, pig control regimes were simulated.
 The model produced in this study provides a framework that links
 conservation of indigenous ecological communities to control inputs
 through the reduction of wildlife damage and suggests that managers should
 consider carefully the marginal cost of higher investment in wildlife
 damage control, relative to its marginal conservation return.
description: ground-disturbance-ratesRates of feral pig ground disturbance from the Waitakere Ranges, Auckland, New Zealand. Taken from yearly monitoring of disturbance transects from 2008-2011cull-dataKill data from hunting operations (n = 9; August 2008−2011) that occurred at approximately 6-month intervals over the first 18 months of the study (3 operations), then at 3-month intervals (6 operations).transect-disturbanceThe percentage of ground disturbed by feral pigs along each (arbitrarily named A-W) 200m ground disturbance monitoring transect.Transects were monitored four times (November 2008, September 2009, December 2010 and August 2011)
DOI: 10.5061/dryad.0g3d5
title: Data from: Ornament size and colour as alternative strategies for effective communication in gliding lizards

description: Sexual ornamentation needs to be conspicuous to be effective in attracting
 potential mates and defending territories and indeed, a multitude of ways
 exists to achieve this. Two principal mechanisms for increasing
 conspicuousness are to increase the ornament's colour or brightness
 contrast against the background and to increase the size of the ornament.
 We assessed the relationship between the colour and size of the dewlap, a
 large extendible throat-fan, across a range of species of gliding lizards
 (Agamidae; genus Draco) from Malaysia and the Philippines. We found a
 negative relationship across species between colour contrast against the
 background and dewlap size in males, but not in females, suggesting that
 males of different species use increasing colour contrast and dewlap size
 as alternative strategies for effective communication. Male dewlap size
 also increases with increasing sexual size dimorphism, and dewlap colour
 and brightness contrast increase with increasing sexual dichromatism in
 colour and brightness, respectively, suggesting that sexual selection may
 act on both dewlap size and colour. We further found evidence that
 relative predation intensity, as measured from predator attacks on models
 placed in the field, may play a role in the choice of strategy (high
 chromatic contrast or large dewlap area) a species employs. More broadly,
 these results highlight that each component in a signal (such as colour or
 size) may be influenced by different selection pressures and that by
 assessing components individually, we can gain a greater understanding of
 the evolution of signal diversity.
description: draco_comparative
 dataSpecies' mean
 dewlap traits for males and females and sexual
 dimorphsims
DOI: 10.5061/dryad.87754
title: Data from: The biomechanical basis of evolutionary change in a territorial display

description: 1. Few studies have examined how the anatomy of an animal signal
 contributes to, or limits, the evolution of signal differentiation among
 closely related species. 2. In Anolis lizards, adult males extend a large,
 conspicuous dewlap as part of a territorial advertisement display. Males
 of species from the island of Jamaica rely on the rapid extension of the
 dewlap to facilitate display detection by territorial neighbours and
 conspecific females. Males of other species on the island of Puerto Rico
 extend the dewlap at considerably slower speeds and instead rely on other
 strategies to maintain an effective display. What initially prompted this
 divergence in display between the islands is unknown, but evidence
 suggests that it may have something to do with the way the dewlap is
 extended during display. 3. Our goal was to determine whether an
 innovation in the dewlap lever in Jamaican lineages, but absent in Puerto
 Rican lineages, accounted for the evolution of the high-speed dewlap on
 Jamaica. We began by modelling the performance of the Anolis dewlap as a
 first order lever system. We then simulated changes to this system
 relating to its morphology, articulation and input force in biologically
 realistic ways to predict how such changes impact dewlap speed. Finally,
 we compared these predictions to data on the morphology of the dewlap
 lever system from museum specimens and actual dewlap speed recorded for
 lizards in the field. 4. This investigation revealed that changes to the
 dewlap lever have affected the performance of the dewlap display in at
 least two ways. Within islands, structural changes to the hyoid morphology
 seem to have led to differences in dewlap speed among species. Between
 islands, however, differences in dewlap speed were most likely the result
 of a major increase in muscle contraction velocity that powers the dewlap
 extension in Jamaican species, but has not originated in species on Puerto
 Rico. 5. Our study shows how the biomechanics of a social signal can have
 important implications for understanding why closely related species might
 differ in signal behaviour, despite apparent similarities in the selection
 pressures that act on the signal.
description: OrdTJ_FE-2013-00093_readmeSee read me file for details.OrdTJ_FE-2013-00093_speciesdata.txt
DOI: 10.17028/rd.lboro.31157140
title: Supplementary information files for "Distinct patterns in neuromuscular adaptation to repeated perturbations in chronic ankle instability"

description: Supplementary files for article "Distinct patterns in neuromuscular adaptation to repeated perturbations in chronic ankle instability"<br><br><b>Background:</b> Neuromuscular impairments following ankle sprains are central to chronic ankle instability (CAI), potentially leading to compensatory muscle co-contraction to regulate ankle stiffness, particularly in response to external perturbations. The acute effect of practice on muscle activation and postural responses reveal initial deficits in motor control and indicate the capacity of individuals with CAI to overcome these deficits within their specific constraints. This study aimed to examine adaptive changes in lower limb muscle co-contraction between CAI and healthy control (HC) participants during repeated perturbations and assess whether practice influences postural control and strategy.<b>Methods:</b> Twenty-three CAI and 23 HC participants performed a single-leg balance task involving repetitive mediolateral perturbations. Surface electromyography, ground reaction force and whole-body kinematics were recorded, and margin of stability (MoS) and the coupling between MoS and ankle-/ hip-joint torques were calculated.<b>Results:</b> Individuals with CAI demonstrated different adaptive changes in muscle co-contraction for Tibialis Anterior (TA) - Peroneus Longus (PL) and TA - Soleus compared to HC. In healthy controls, TA-PL co-contraction decreased significantly with practice, while no changes were observed in the CAI group. Repeated perturbations improved MoS and MoS-Hip torque coordination in CAI, suggesting improved postural control and hip strategy.<b>Conclusions:</b> Rehabilitation for CAI should target both the whole-body coordination and ankle adaptation exercise since ankle joint appears refractory to change in CAI individuals. Future research should explore whether co-contraction patterns influence risk of ankle sprain in CAI populations, linking lab-based performance to real-world injury risks.<br><br>©The Author(s), CC BY 4.0
DOI: 10.17028/rd.lboro.31157140.v1
title: Supplementary information files for "Distinct patterns in neuromuscular adaptation to repeated perturbations in chronic ankle instability"

description: Supplementary files for article "Distinct patterns in neuromuscular adaptation to repeated perturbations in chronic ankle instability"<br><br><b>Background:</b> Neuromuscular impairments following ankle sprains are central to chronic ankle instability (CAI), potentially leading to compensatory muscle co-contraction to regulate ankle stiffness, particularly in response to external perturbations. The acute effect of practice on muscle activation and postural responses reveal initial deficits in motor control and indicate the capacity of individuals with CAI to overcome these deficits within their specific constraints. This study aimed to examine adaptive changes in lower limb muscle co-contraction between CAI and healthy control (HC) participants during repeated perturbations and assess whether practice influences postural control and strategy.<b>Methods:</b> Twenty-three CAI and 23 HC participants performed a single-leg balance task involving repetitive mediolateral perturbations. Surface electromyography, ground reaction force and whole-body kinematics were recorded, and margin of stability (MoS) and the coupling between MoS and ankle-/ hip-joint torques were calculated.<b>Results:</b> Individuals with CAI demonstrated different adaptive changes in muscle co-contraction for Tibialis Anterior (TA) - Peroneus Longus (PL) and TA - Soleus compared to HC. In healthy controls, TA-PL co-contraction decreased significantly with practice, while no changes were observed in the CAI group. Repeated perturbations improved MoS and MoS-Hip torque coordination in CAI, suggesting improved postural control and hip strategy.<b>Conclusions:</b> Rehabilitation for CAI should target both the whole-body coordination and ankle adaptation exercise since ankle joint appears refractory to change in CAI individuals. Future research should explore whether co-contraction patterns influence risk of ankle sprain in CAI populations, linking lab-based performance to real-world injury risks.<br><br>©The Author(s), CC BY 4.0
DOI: 10.5061/dryad.p3bn4fk
title: Data from: Impact of involvement of non-formal health providers on TB case notification among migrant slum-dwelling populations in Odisha, India

description: Background: Migrant labourers living in the slums of urban and industrial
 patches across India make up a key sub-population so far controlling
 Tuberculosis (TB) in the country is concerned. This is because many TB
 patients from these communities remain under reached by the Revised
 National Tuberculosis Control Programme (RNTCP) of India. This
 marginalized community usually seeks early-stage healthcare from
 "friendly neighbourhood" non-formal health providers (NFHPs).
 Because, RNTCP has limited capacity to involve the NFHPs, an
 implementation research project was conceived, whereby an external partner
 would engage with the NFHPs to enable them to identify early TB
 symptomatics from this key sub-population who would be then tested using
 Xpert MTB/RIF technology. Diagnosed TB cases among them would be referred
 promptly to RNTCP for treatment. This paper aimed to describe the project
 and its impact. Methods: Adopting a quasi-experimental before-after
 design, four RNTCP units from two major urban-industrial areas of Odisha
 were selected for intervention, which spanned five quarters and covered
 151,400 people, of which 30% were slum-dwelling migrants. Two similar
 units comprised the control population. The hypothesis was, reaching the
 under reached in the intervention area through NFHPs would increase TB
 notification from these traditionally under-notifying units. RNTCP
 notification data during intervention was compared with pre-intervention
 era, adjusted for contemporaneous changes in control population. Results:
 The project detected 488 Xpert+ TB cases, of whom 466 were administered
 RNTCP treatment. This translated into notification of additional 198 new
 bacteriologically positive cases to RNTCP, a 30% notification surge, after
 adjustment for 2% decline in control. This meant an average quarterly
 increase in notification of 41.20(20.08, 62.31; p&lt;0.001) cases. The
 increase was immediate, evident from the rise in level in the time series
 analysis by 50.42(10.28, 90.55; p=0.02) cases. Conclusion: Engagement with
 NFHPs contributed to an increase in TB notification to RNTCP from key
 under reached, slum-dwelling migrant populations.
description: tb_reach_data_Plos_One