cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20584484.v1
title: Tumor mutational burden in non-immunotherapy patients with heavily pretreated metastatic breast cancer: long-term outcomes from a single institution

description: Patients with heavily pretreated (≥3<sup>rd</sup>-line treatment) metastatic breast cancer (MBC) had poor outcomes and lack prognostic biomarkers. Tumor mutational burden (TMB) was a prognostic biomarker for immunotherapy, but is not well defined in non-immunotherapy. Forty-nine heavily pretreated MBC not received immunotherapy were enrolled between March 2016 and September 2018. TMB of metastatic tumor tissue was evaluated by targeted next-generation sequencing of a 247-genes panel. CBRs (clinical benefit rates) were 47.7% (9 months), 36.2% (12 months) in high TMB patients, higher than 16.1% (9 months), 8.1% (12 months) in low TMB patients, respectively. After a median follow-up of 38 months, patients with high TMB had a longer mPFS (median progress-free survival) compared to low TMB patients in 3<sup>rd</sup>-line treatment group (13.5 versus 7 months, HR 0.32, <i>p</i> = 0.019) but not in &gt;3<sup>rd</sup>-line treatment group. Cox regression showed TMB and line of treatment were the two independent prognostic factors for prolonged mPFS in heavily pretreated MBC, with a HR of 0.34 (<i>p</i> = 0.009) for high TMB and 0.37 (<i>p</i> = 0.013) for 3<sup>rd</sup>-line treatment. In luminal subtype, mPFS was longer with endocrine therapy (ET) alone than with endocrine therapy + chemotherapy (ET + CT) in high TMB cohort (<i>p</i> = 0.037) but shorter mPFS with ET alone than with ET + CT in low TMB cohort (<i>p</i> = 0.047). High TMB and line of treatment are two independent prognostic factors for prolonged mPFS in heavily pretreated MBC patients. TMB may be a predictive biomarker of efficacy with ET alone or ET + CT in luminal subtype.
DOI: 10.24403/jp.1322212
title: Exkursion in die Finne-Ausläufer nordöstlich Eckertsberga und in das Hasseltal um Klosterhaeseler am 23. Juni 1985 / A. Keding
DOI: 10.24403/jp.1322213
title: Exkursion zum Königstuhl westlich von Kranichfeld am 30. Juni 1985 / D. Weber
DOI: 10.6084/m9.figshare.12195975
title: A relational database to identify differentially expressed genes in the endometrium and endometriosis lesions

description: Endometriosis is a common inflammatory
estrogen-dependent gynecological disorder, associated with pelvic pain and
reduced fertility in women. Several aspects of this disorder and its cellular
and molecular etiology remain unresolved. We have analyzed the global gene
expression patterns in the endometrium, peritoneum and in endometriosis lesions
of endometriosis patients and in the endometrium and peritoneum of healthy women.
In this report, we present the EndometDB, an interactive web-based user
interface for browsing the gene expression database of collected samples
without the need for computational skills. The current database incorporates
the expression data from 115 patients and 53 controls, with over 24000 genes
and clinical features, such as their age, disease stages, hormonal medication,
menstrual cycle phase, and the different endometriosis lesion types. Using the
web-tool, the end-user can easily generate various plot outputs, including
boxplots, heatmaps and scatterplots, and the generated plot outputs can be downloaded
in pdf-format. Availability
and implementation: The web-based user interface is implemented using HTML5,
JavaScript, CSS, Plotly and R. It is freely available from URL: https://endometdb.utu.fi/gene_analysis.<br>Endomet Database dump and schema.<br><br>Number of samples used in quantitative real-time PCR.<br><br>Pie chart showing the percentage of the different types of samples analyzed for global gene expression by microarrays.<br>Multidimensional scaling of WNT pathway genes of
the endometrium vs endometriosis samples using Canberra distance metric and
colored by tissues.<b> </b>The analysis separates endometrial specimens from
the different lesions<b>.</b><b><br></b>Result of scree test for PCA analysis of WNT
pathway genes. The scree plot explains how much the principal components
account for the total variance in the expression data.<b><br></b>
DOI: 10.24403/jp.1322216
title: Exkursion in die Hainleite um den Possen bei Sondershausen am 4. August 1985 / F. K. Meyer
DOI: 10.24403/jp.1322228
title: Exkursion zum Nordrand des Tautenburger Forstes am 18. August 1985 / K.-F. Günther
DOI: 10.6084/m9.figshare.19536082
title: Sources of organic aerosols in east China: A modeling study with high-resolution intermediate-volatility and semi-volatile organic compound emissions

description:  Organic aerosol (OA) contributes a large fraction of atmospheric submicron aerosol and has negative impacts on air quality, climate, and human health. Sources of OA still remains unclear due to the inadequacy of emission inventory and modeling system. Herein, we established a high-resolution emission inventory of intermediate-volatility and semi-volatile organic compounds (I/SVOCs) and applied it into CMAQ to simulate POA and SOA from different sources in eastern China. Comprehensive observation data of organic carbon (OC), primary and secondary organic aerosol (POA, SOA), and precursors were used for the verification of model performance. With the addition of I/SVOC emissions, OA simulations in each season were substantially improved by increasing the modeled SOA by 1.2 times. I/SVOC emissions contributed 53.6% of SOA and 23.5% of total OA on average. Cooking emissions dominated the POA concentrations in most of the cities. I/SVOC emissions from industrial sources have become the predominant source of regional SOA, followed by those from mobile sources. The differences in OA source contributions between the cities implies that differentiated control measures shall be considered to OA pollution mitigation. Meanwhile, more localized I/SVOCs emission measurements and more sophisticated SOA simulation mechanisms are urgently needed to further improve the identification of OA sources in eastern China.
DOI: 10.6084/m9.figshare.12720392
title: A Gd@C82 single-molecule electret

description: <b>This is the data for "A Gd@C<sub>82</sub> single-molecule electret"</b>
DOI: 10.24403/jp.1322232
title: Exkursion in den Südteil des Thüringer Beckens am 15. September 1985 / K.-F. Günther
DOI: 10.24403/jp.1322249
title: Pilzexkursion in die Rudolstädter Heide am 22. September 1985 / G. Hirsch
DOI: 10.6084/m9.figshare.24779169
title: Additional file 1 of Full-length transcriptome characterization and comparative analysis of Gleditsia sinensis

description: Additional file 1.
DOI: 10.6084/m9.figshare.24779169.v1
title: Additional file 1 of Full-length transcriptome characterization and comparative analysis of Gleditsia sinensis

description: Additional file 1.
DOI: 10.6084/m9.figshare.6953390
title: Adiposity genetic risk score modifies the association between blood lead level and body mass index

description: The full list of each SNP was shown in <b>Supplemental Table 1</b>. The
interactions of single SNP and BLL on abnormal weight status were measured (<b>Supplemental Table 2</b>). In this study, we found the GRS was associated with
lipid profile and hypertension (<b>Supplemental
Table 3</b>).
DOI: 10.6084/m9.figshare.24779253
title: Additional file 1 of Effects of diabetes mellitus and glycemic traits on cardiovascular morpho-functional phenotypes

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24779253.v1
title: Additional file 1 of Effects of diabetes mellitus and glycemic traits on cardiovascular morpho-functional phenotypes

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.20581001
title: Additional file 8 of RNA sequencing reveals dynamic expression of lncRNAs and mRNAs in caprine endometrial epithelial cells induced by Neospora caninum infection

description: Additional file 8: Data S8. The gene co-expression analysis of differentially expressed (DE) lncRNAs and DEmRNAs.
DOI: 10.6084/m9.figshare.20580956.v1
title: Additional file 16 of RNA sequencing reveals dynamic expression of lncRNAs and mRNAs in caprine endometrial epithelial cells induced by Neospora caninum infection

description: Additional file 16: Data S13. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis of all cis-target genes for the differentially expressed lncRNAs (DElncRNAs).
DOI: 10.6084/m9.figshare.20580974
title: Additional file 1 of RNA sequencing reveals dynamic expression of lncRNAs and mRNAs in caprine endometrial epithelial cells induced by Neospora caninum infection

description: Additional file 1: Data S1. The primer sequences used in this study by quantitative real-time PCR (qRT‑PCR).
DOI: 10.6084/m9.figshare.20580989.v1
title: Additional file 5 of RNA sequencing reveals dynamic expression of lncRNAs and mRNAs in caprine endometrial epithelial cells induced by Neospora caninum infection

description: Additional file 5: Data S5. All differentially expressed mRNAs (DEmRNAs).
DOI: 10.6084/m9.figshare.20580944.v1
title: Additional file 13 of RNA sequencing reveals dynamic expression of lncRNAs and mRNAs in caprine endometrial epithelial cells induced by Neospora caninum infection

description: Additional file 13: Data S11. Gene Ontology (GO) enrichment analysis of all cis-target genes for the differentially expressed lncRNAs (DElncRNAs).
DOI: 10.15468/dl.va75cy
title: Occurrence Download

description: A dataset containing 936 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Moenkhausia dichroura (Kner, 1858)"
 ]
}

 The dataset includes 936 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0325293-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f89vow
title: Occurrence Download

description: A dataset containing 634 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Specimen"
 ]
 },
 "Year 1000-2018",
 "HasCoordinate is true",
 "TaxonKey is Drosophila melanogaster Meigen, 1830",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 634 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008543-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68q5rm
title: Occurrence Download

description: A dataset containing 162 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Human Observation"
 ]
 },
 "CoordinateUncertaintyInMeters 0.0-506700.0",
 "Geometry POLYGON((-239.76562 16.63619,-101.51367 18.28125,-118.38867 65.03906,-235.89844 66.51326,-239.76562 16.63619))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Prionace glauca (Linnaeus, 1758)",
 "Year 1990-2021"
 ]
}

 The dataset includes 162 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037809-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.umuy62
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Squid specimens from the 1991/92 V6 AAMBER2 voyage"
 ]
}

 The dataset includes 129 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084499-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xb6c6y
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Discyphus scopulariae (Rchb.f.) Schltr."
 ]
}

 The dataset includes 22 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0263065-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uwsedu
title: Occurrence Download

description: A dataset containing 518 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Plectranthus ecklonii Benth.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 518 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051696-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ho3hzq
title: Occurrence Download

description: A dataset containing 383 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poecilia velifera (Regan, 1914)"
 ]
}

 The dataset includes 383 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008543-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.74gmud
title: Occurrence Download

description: A dataset containing 7865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is Asia",
 "Country is Philippines",
 "PublishingOrg is 2e167bb0-4441-11db-9ba2-b8a03c50a862",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 7865 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0302872-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zumxfp
title: Occurrence Download

description: A dataset containing 12888 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters is less than or equal to 1000.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Eriocheir sinensis H.Milne Edwards, 1853"
 ]
}

 The dataset includes 12888 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0298940-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qh4kyt
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombus melaleucus Handlirsch, 1888"
 ]
}

 The dataset includes 61 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0221277-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3x9t9w
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Rhinoclemmys diademata (Mertens, 1954)"
 ]
}

 The dataset includes 27 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081838-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2fz7wf
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tephroseris takedana (Kitam.) Holub"
 ]
}

 The dataset includes 124 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0302866-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bujbsh
title: Occurrence Download

description: A dataset containing 31722 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((5.925 51.975,5.975 51.975,5.975 52.025,5.925 52.025,5.925 51.975))",
 "DatasetKey is Observation.org, Nature data from around the World",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 31722 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0306951-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzkyrs
title: Occurrence Download

description: A dataset containing 1543 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-8.1353 55.55727,-10.60746 54.41645,-11.01053 53.06572,-10.87617 51.6546,-9.72071 51.11798,-5.93185 51.93712,-5.26006 52.67645,-5.15258 53.59528,-5.50191 53.99209,-5.07196 54.41645,-5.50191 55.00632,-6.09308 55.3592,-8.1353 55.55727))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Laminaria digitata (Huds.) J.V.Lamour."
 ]
}

 The dataset includes 1543 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0230728-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gszspk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erophila vulgaris subsp. inflata H.C.Watson ex Hook.f."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046249-220831081235567/datasets/export for details.
DOI: 10.15468/dl.hsntsk
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus lobbii Hook.f. & Thomson ex Ettingsh."
 ]
}

 The dataset includes 16 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069919-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gn4g48
title: Occurrence Download

description: A dataset containing 175961 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "TaxonKey is Bombus Latreille, 1802"
 ]
}

 The dataset includes 175961 records from 142 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034951-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uhesss
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corydalis eugeniae Fedde",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0322071-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uvgh74
title: Occurrence Download

description: A dataset containing 1856 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombus pauloensis Friese, 1912"
 ]
}

 The dataset includes 1856 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0221282-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hnddpk
title: Occurrence Download

description: A dataset containing 17998978 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sturnus vulgaris Linnaeus, 1758"
 ]
}

 The dataset includes 17998978 records from 3226 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0414971-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.5008442.v2
title: GO enrichment of deletion strains present in the HLU signature from Comparative functional genomic screens of three yeast deletion collections reveal unexpected effects of genotype in response to diverse stress.

description: GO biological process enrichment for the 73 deletion strains present in the HLU deletion signature.
DOI: 10.6084/m9.figshare.5008442.v1
title: GO enrichment of deletion strains present in the HLU signature from Comparative functional genomic screens of three yeast deletion collections reveal unexpected effects of genotype in response to diverse stress

description: GO biological process enrichment for the 73 deletion strains present in the HLU deletion signature.
DOI: 10.6073/pasta/2dda62c0365e2b573d079f93d293dd13
title: Jornada Basin LTER: Wireless meteorological station at NPP T-EAST site: 30-minute summary data: 2013 - ongoing

description: 30-minute summary data at NPP P-TOBO met station. Average air temperature, relative humidity, wind speed, wind direction, and solar radiation are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP P-TOBO site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Solar radiation is measured at 3m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6084/m9.figshare.5008469
title: GO enrichment of strains absent in the BCprot from Comparative functional genomic screens of three yeast deletion collections reveal unexpected effects of genotype in response to diverse stress.

description: GO biological process enrichment for the 882 deletion strains below the threshold of detection by microarray in the BCprot relative to the gene universe of strains present in at least one deletion collection
DOI: 10.6084/m9.figshare.5008469.v1
title: GO enrichment of strains absent in the BCprot from Comparative functional genomic screens of three yeast deletion collections reveal unexpected effects of genotype in response to diverse stress

description: GO biological process enrichment for the 882 deletion strains below the threshold of detection by microarray in the BCprot relative to the gene universe of strains present in at least one deletion collection
DOI: 10.6084/m9.figshare.5008469.v2
title: GO enrichment of strains absent in the BCprot from Comparative functional genomic screens of three yeast deletion collections reveal unexpected effects of genotype in response to diverse stress.

description: GO biological process enrichment for the 882 deletion strains below the threshold of detection by microarray in the BCprot relative to the gene universe of strains present in at least one deletion collection
DOI: 10.6084/m9.figshare.5008415
title: Median log2ratios for comparative fitness profiling by microarray from Comparative functional genomic screens of three yeast deletion collections reveal unexpected effects of genotype in response to diverse stress.

description: For microarray data generated for each deletion collection and drug or environmental experimental condition relative to its control, median log2ratios for condition replicates are given.
DOI: 10.6084/m9.figshare.5008415.v2
title: Median log2ratios for comparative fitness profiling by microarray from Comparative functional genomic screens of three yeast deletion collections reveal unexpected effects of genotype in response to diverse stress.

description: For microarray data generated for each deletion collection and drug or environmental experimental condition relative to its control, median log2ratios for condition replicates are given.