cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7027391.v1
title: Additional file 2: of Bartonella DNA in heart tissues of bats in central and eastern Europe and a review of phylogenetic relations of bat-associated bartonellae

description: Table S2. Detailed information regarding the sequences used in the phylogenetic analysis. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.7027370
title: Additional file 1: of Bartonella DNA in heart tissues of bats in central and eastern Europe and a review of phylogenetic relations of bat-associated bartonellae

description: Table S1. Samples distribution according to locality and species. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.7027370.v1
title: Additional file 1: of Bartonella DNA in heart tissues of bats in central and eastern Europe and a review of phylogenetic relations of bat-associated bartonellae

description: Table S1. Samples distribution according to locality and species. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.7027322
title: Additional file 1: of Traditional gender inequalities limit pastoral womenâ s opportunities for adaptation to climate change: Evidence from the Afar pastoralists of Ethiopia

description: Raw data collected on gender differentiated vulnerability to climate change in Aba'ala district, Afar Regional State, Ethiopia. (RAR 27 kb)
DOI: 10.6084/m9.figshare.7027322.v1
title: Additional file 1: of Traditional gender inequalities limit pastoral womenâ s opportunities for adaptation to climate change: Evidence from the Afar pastoralists of Ethiopia

description: Raw data collected on gender differentiated vulnerability to climate change in Aba'ala district, Afar Regional State, Ethiopia. (RAR 27 kb)
DOI: 10.6084/m9.figshare.7027298
title: Additional file 3 of Clustering approaches for visual knowledge exploration in molecular interaction networks

description: Complete enrichment results. This file contains a table with numbers of enriched terms for all tested clustering solutions. Additional fileÂ 5 contains a figure with comparison of all clustering solutions, per approach - hierarchical clustering with combined distance functions and bi-level clustering. (XLSX 215 KB)
DOI: 10.6084/m9.figshare.7027298.v1
title: Additional file 3 of Clustering approaches for visual knowledge exploration in molecular interaction networks

description: Complete enrichment results. This file contains a table with numbers of enriched terms for all tested clustering solutions. Additional fileÂ 5 contains a figure with comparison of all clustering solutions, per approach - hierarchical clustering with combined distance functions and bi-level clustering. (XLSX 215 KB)
DOI: 10.6084/m9.figshare.7027283
title: Additional file 2 of Clustering approaches for visual knowledge exploration in molecular interaction networks

description: Complete F-measure results. This file contains a table with F-measure values for all tested clustering solutions. Additional fileÂ 5 contains a figure with comparison of maximum F-measure per clustering, per approach - hierarchical clustering with single distance function, hierarchical clustering with combined distance functions and bi-level clustering. (XLSX 197 KB)
DOI: 10.6084/m9.figshare.7027283.v1
title: Additional file 2 of Clustering approaches for visual knowledge exploration in molecular interaction networks

description: Complete F-measure results. This file contains a table with F-measure values for all tested clustering solutions. Additional fileÂ 5 contains a figure with comparison of maximum F-measure per clustering, per approach - hierarchical clustering with single distance function, hierarchical clustering with combined distance functions and bi-level clustering. (XLSX 197 KB)
DOI: 10.6084/m9.figshare.7027274
title: Additional file 2: of Short term optical defocus perturbs normal developmental shifts in retina/RPE protein abundance

description: Table S2. Pre-processed LC-ESI-MS/MS dataset. (XLSX 608 kb)
DOI: 10.6084/m9.figshare.7027271
title: Additional file 1 of Clustering approaches for visual knowledge exploration in molecular interaction networks

description: Reorganized AlzPathway. This file contains a CellDesigner format of the reorganized AlzPathway, with a number of elements duplicated and rearranged to reduce their Euclidean distance while increasing their network distance. Original AlzPathway was published in [12], under the CC BY 3.0 license. See also alzpathway.org for details. (ZIP 261 KB)
DOI: 10.6084/m9.figshare.7027274.v1
title: Additional file 2: of Short term optical defocus perturbs normal developmental shifts in retina/RPE protein abundance

description: Table S2. Pre-processed LC-ESI-MS/MS dataset. (XLSX 608 kb)
DOI: 10.6084/m9.figshare.7027271.v1
title: Additional file 1 of Clustering approaches for visual knowledge exploration in molecular interaction networks

description: Reorganized AlzPathway. This file contains a CellDesigner format of the reorganized AlzPathway, with a number of elements duplicated and rearranged to reduce their Euclidean distance while increasing their network distance. Original AlzPathway was published in [12], under the CC BY 3.0 license. See also alzpathway.org for details. (ZIP 261 KB)
DOI: 10.6084/m9.figshare.7027265
title: Additional file 1: of Short term optical defocus perturbs normal developmental shifts in retina/RPE protein abundance

description: Table S1. Biometric measures (refraction, axial length, and vitreous chamber depth) for each sample. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7027265.v1
title: Additional file 1: of Short term optical defocus perturbs normal developmental shifts in retina/RPE protein abundance

description: Table S1. Biometric measures (refraction, axial length, and vitreous chamber depth) for each sample. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7027256
title: Additional file 1: of Sublethal effects of a vapour-active pyrethroid, transfluthrin, on Aedes aegypti and Ae. albopictus (Diptera: Culicidae) fecundity and oviposition behaviour

description: Table S1. Raw data for Figs. 2â 3. (XLSX 186 kb)
DOI: 10.6084/m9.figshare.7027256.v1
title: Additional file 1: of Sublethal effects of a vapour-active pyrethroid, transfluthrin, on Aedes aegypti and Ae. albopictus (Diptera: Culicidae) fecundity and oviposition behaviour

description: Table S1. Raw data for Figs. 2â 3. (XLSX 186 kb)
DOI: 10.6084/m9.figshare.7027241
title: Additional file 3: of Influence of cigarette smoking on the human duodenal mucosa-associated microbiota

description: Supplementary Table S3 -Â OTU table with raw read counts.Â (XLSX 46 kb)
DOI: 10.6084/m9.figshare.7027241.v1
title: Additional file 3: of Influence of cigarette smoking on the human duodenal mucosa-associated microbiota

description: Supplementary Table S3 -Â OTU table with raw read counts.Â (XLSX 46 kb)
DOI: 10.6084/m9.figshare.7027229
title: Additional file 5: of Differentially expressed proteins in positive versus negative HNSCC lymph nodes

description: Positive scores for gene-to-HNSCC association determined by HNdb hypergeometric test. (XLS 33 kb)
DOI: 10.6084/m9.figshare.7027229.v1
title: Additional file 5: of Differentially expressed proteins in positive versus negative HNSCC lymph nodes

description: Positive scores for gene-to-HNSCC association determined by HNdb hypergeometric test. (XLS 33 kb)
DOI: 10.6084/m9.figshare.7027214
title: Additional file 4: of Differentially expressed proteins in positive versus negative HNSCC lymph nodes

description: Enriched categories for 52 genes mapped to 53 DAVID identifiers. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.7027214.v1
title: Additional file 4: of Differentially expressed proteins in positive versus negative HNSCC lymph nodes

description: Enriched categories for 52 genes mapped to 53 DAVID identifiers. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.7027193
title: MOESM9 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 9. All scripts used to generate QSPR input files, modelling results and perform analysis.
DOI: 10.6084/m9.figshare.7027193.v1
title: MOESM9 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 9. All scripts used to generate QSPR input files, modelling results and perform analysis.
DOI: 10.6084/m9.figshare.7027178
title: MOESM8 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 8. The curated temperature dependent solubility and enthalpy of solution datasets, including the calculated lattice energies, and the SUB-48 dataset.
DOI: 10.6084/m9.figshare.7027178.v1
title: MOESM8 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 8. The curated temperature dependent solubility and enthalpy of solution datasets, including the calculated lattice energies, and the SUB-48 dataset.
DOI: 10.6084/m9.figshare.7027163
title: MOESM7 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 7. The Perl script used for Materials Studio lattice energy calculations, along with the Python scripts used to generate CIF input files from CSD refcodes, including filtering, as well as the Python scripts used for evaluation of the lattice energy protocol on the SUB-48 dataset.
DOI: 10.6084/m9.figshare.7027163.v1
title: MOESM7 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 7. The Perl script used for Materials Studio lattice energy calculations, along with the Python scripts used to generate CIF input files from CSD refcodes, including filtering, as well as the Python scripts used for evaluation of the lattice energy protocol on the SUB-48 dataset.
DOI: 10.6084/m9.figshare.7027157
title: MOESM6 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 6. The â Feature Selection Toolâ .
DOI: 10.6084/m9.figshare.7027157.v1
title: MOESM6 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 6. The â Feature Selection Toolâ .
DOI: 10.6084/m9.figshare.7027148
title: MOESM5 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 5. An automated test suite for â QSPR Data Processing Tools Suiteâ .
DOI: 10.6084/m9.figshare.7027148.v1
title: MOESM5 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 5. An automated test suite for â QSPR Data Processing Tools Suiteâ .
DOI: 10.6084/m9.figshare.7027136
title: MOESM4 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 4. The â QSPR Data Processing Tools Suiteâ , used by the scripts employed to generate all QSPR results.
DOI: 10.6084/m9.figshare.7027136.v1
title: MOESM4 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 4. The â QSPR Data Processing Tools Suiteâ , used by the scripts employed to generate all QSPR results.
DOI: 10.6084/m9.figshare.7027130
title: MOESM3 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 3. Additional results files, in electronic format. These additional results are (a) SUB-48 calculated lattice energies for the complete set and filtered set of 27 crystal structures, (b) results from analysis of the correspondence between our temperature dependent solubility data and (1/T), (c) Excel workbooks documenting all R2 and RMSE values obtained from cross-validation, their mean values and the p values (both raw and adjusted) obtained from pairwise comparisons of corresponding models, (d) comparison of melting point data used for the melting point descriptor and retrieved from the CSD for linked refcodes.
DOI: 10.6084/m9.figshare.7027130.v1
title: MOESM3 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 3. Additional results files, in electronic format. These additional results are (a) SUB-48 calculated lattice energies for the complete set and filtered set of 27 crystal structures, (b) results from analysis of the correspondence between our temperature dependent solubility data and (1/T), (c) Excel workbooks documenting all R2 and RMSE values obtained from cross-validation, their mean values and the p values (both raw and adjusted) obtained from pairwise comparisons of corresponding models, (d) comparison of melting point data used for the melting point descriptor and retrieved from the CSD for linked refcodes.
DOI: 10.6084/m9.figshare.7027124
title: MOESM2 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 2. All QSPR ready datasets, prior to feature selection, associated with all considered sets of descriptors. N.B. In the case of the temperature (T) values, these were replaced with (1/T) using additional scripts prior to both feature selection and modelling.
DOI: 10.6084/m9.figshare.7027124.v1
title: MOESM2 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 2. All QSPR ready datasets, prior to feature selection, associated with all considered sets of descriptors. N.B. In the case of the temperature (T) values, these were replaced with (1/T) using additional scripts prior to both feature selection and modelling.
DOI: 10.6084/m9.figshare.7027103
title: MOESM10 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 10. SMARTS patterns used by one of the QSPR input file scripts (see Additional file 1), which were adapted from the Rdkit documentation [56].
DOI: 10.6084/m9.figshare.7027103.v1
title: MOESM10 of The influence of solid state information and descriptor selection on statistical models of temperature dependent aqueous solubility

description: Additional file 10. SMARTS patterns used by one of the QSPR input file scripts (see Additional file 1), which were adapted from the Rdkit documentation [56].
DOI: 10.6084/m9.figshare.7027079
title: MOESM2 of Using ante-natal clinic prevalence data to monitor temporal changes in malaria incidence in a humanitarian setting in the Democratic Republic of Congo

description: Additional file 2. This dataset contains monthly time series data for all 5 MSF locations, including ANC visits, ANC prevalence, and clinical incidence in children under 5 years old.
DOI: 10.6084/m9.figshare.7027079.v1
title: MOESM2 of Using ante-natal clinic prevalence data to monitor temporal changes in malaria incidence in a humanitarian setting in the Democratic Republic of Congo

description: Additional file 2. This dataset contains monthly time series data for all 5 MSF locations, including ANC visits, ANC prevalence, and clinical incidence in children under 5 years old.
DOI: 10.6084/m9.figshare.7026956
title: Additional file 1 of Applications of node-based resilience graph theoretic framework to clustering autism spectrum disorders phenotypes

description: Cohen-d test values for Tables 6 and 7 to evaluate the effect sizes for each pairwise comparison. (XLSX 32 kb)
DOI: 10.6084/m9.figshare.7026959
title: Additional file 2: of Genome-wide analysis of root hair-preferential genes in rice

description: Table S1. Selected rice root hair-preferentially expressed genes. Table S2. Classification of GO terms for Biological Processes associated with rice root hair-preferential genes. Table S3. MapMan classification of root hair-preferential genes in rice. Table S4. RHE sequences and positions within promoters of root hair-preferentially expressed genes. Table S5. Locus numbers and putative functions of root hair-preferential genes of Arabidopsis. Table S6. Arabidopsis orthologs for rice root hair-preferential genes. Table S7. Rice orthologs for Arabidopsis root hair-preferential genes. Table S8. Predicted proteinâ protein interactions of root hair-preferential genes. Table S9. Primer sequences used in this study. (XLSX 884 kb)
DOI: 10.6084/m9.figshare.7026956.v1
title: Additional file 1 of Applications of node-based resilience graph theoretic framework to clustering autism spectrum disorders phenotypes

description: Cohen-d test values for Tables 6 and 7 to evaluate the effect sizes for each pairwise comparison. (XLSX 32 kb)
DOI: 10.6084/m9.figshare.7026959.v1
title: Additional file 2: of Genome-wide analysis of root hair-preferential genes in rice

description: Table S1. Selected rice root hair-preferentially expressed genes. Table S2. Classification of GO terms for Biological Processes associated with rice root hair-preferential genes. Table S3. MapMan classification of root hair-preferential genes in rice. Table S4. RHE sequences and positions within promoters of root hair-preferentially expressed genes. Table S5. Locus numbers and putative functions of root hair-preferential genes of Arabidopsis. Table S6. Arabidopsis orthologs for rice root hair-preferential genes. Table S7. Rice orthologs for Arabidopsis root hair-preferential genes. Table S8. Predicted proteinâ protein interactions of root hair-preferential genes. Table S9. Primer sequences used in this study. (XLSX 884 kb)
DOI: 10.6084/m9.figshare.7026950
title: Additional file 2 of An in-silico study examining the induction of apoptosis by Cryptotanshinone in metastatic melanoma cell lines

description: This is an Excel file, it is used to analyze the data from the simulations. It has two sheets ’cry’ and ’nocry’ used to generate the Figs. 17 and 18 respectively. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.7026950.v1
title: Additional file 2 of An in-silico study examining the induction of apoptosis by Cryptotanshinone in metastatic melanoma cell lines

description: This is an Excel file, it is used to analyze the data from the simulations. It has two sheets ’cry’ and ’nocry’ used to generate the Figs. 17 and 18 respectively. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.7026917
title: Additional file 3: of A genome-wide association study for harness racing success in the Norwegian-Swedish coldblooded trotter reveals genes for learning and energy metabolism

description: Functional classification gene list from PANTHER analysis. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.7026917.v1
title: Additional file 3: of A genome-wide association study for harness racing success in the Norwegian-Swedish coldblooded trotter reveals genes for learning and energy metabolism

description: Functional classification gene list from PANTHER analysis. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.7026911
title: Additional file 9: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: The 8811 differentially expressed pathogen genes. This file also include (B) statistics of differential expression feature extraction (DEFE) pattern associated with each gene, (C) values of FHB-related traits, and (D) Pearson correlation between centroids of the clusters and the FHB-related traits. (XLSX 5432 kb)
DOI: 10.6084/m9.figshare.7026911.v1
title: Additional file 9: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: The 8811 differentially expressed pathogen genes. This file also include (B) statistics of differential expression feature extraction (DEFE) pattern associated with each gene, (C) values of FHB-related traits, and (D) Pearson correlation between centroids of the clusters and the FHB-related traits. (XLSX 5432 kb)
DOI: 10.6084/m9.figshare.7026890
title: Additional file 8: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: The chromosomal distribution of various gene populations. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.7026890.v1
title: Additional file 8: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: The chromosomal distribution of various gene populations. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.7026884
title: Additional file 7: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: The 542 phytohormone pathway genes. (XLSX 419 kb)
DOI: 10.6084/m9.figshare.7026884.v1
title: Additional file 7: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: The 542 phytohormone pathway genes. (XLSX 419 kb)
DOI: 10.6084/m9.figshare.7026875
title: Additional file 6: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: The 57 Pathogenesis-Related genes. (XLSX 45 kb)
DOI: 10.6084/m9.figshare.7026875.v1
title: Additional file 6: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: The 57 Pathogenesis-Related genes. (XLSX 45 kb)
DOI: 10.6084/m9.figshare.7026854
title: Additional file 4: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: Enrichment indices of gene groups in various gene populations: DEGs, FHB-resistant, FHB-susceptible, up- and down-regulated by Fg, networks, key hub genes. (XLSX 2244 kb)
DOI: 10.6084/m9.figshare.7026854.v1
title: Additional file 4: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: Enrichment indices of gene groups in various gene populations: DEGs, FHB-resistant, FHB-susceptible, up- and down-regulated by Fg, networks, key hub genes. (XLSX 2244 kb)
DOI: 10.6084/m9.figshare.7026851
title: Additional file 3: of The relationship between size and longevity of the malaria vector Anopheles gambiae (s.s.) depends on the larval environment

description: Script for the piecewise SEM in R. The script is to be used with the Additional file 1. The first part of the script enables the user to install all the necessary packages and to import the dataset. The rest of the script enables the user to realise the piecewise SEM. The different steps are detailed from creating the model to obtaining the standardised regression coefficients. (R 1 kb)
DOI: 10.6084/m9.figshare.7026851.v1
title: Additional file 3: of The relationship between size and longevity of the malaria vector Anopheles gambiae (s.s.) depends on the larval environment

description: Script for the piecewise SEM in R. The script is to be used with the Additional file 1. The first part of the script enables the user to install all the necessary packages and to import the dataset. The rest of the script enables the user to realise the piecewise SEM. The different steps are detailed from creating the model to obtaining the standardised regression coefficients. (R 1 kb)
DOI: 10.6084/m9.figshare.7026842
title: Additional file 3: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

description: FHB resistant genes across all three resistant genotypes (A), common between two genotypes (B), and unique to individual genotypes (C). (XLSX 172 kb)