cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6143054
title: Geochronology, geochemistry, and petrology of adakitic Pliocene–Quaternary volcanism in the Şebinkarahisar (Giresun) area, NE Turkey

description: The Pliocene–Quaternary volcanics in NE Turkey are mainly hornblende–phyric trachyandesites having a narrow range of SiO<sub>2</sub> from 61.88 to 63.00 wt.% and exhibiting adakitic signatures with their Na<sub>2</sub>O (3.67–4.27 wt.%), Al<sub>2</sub>O<sub>3</sub> (16.19–16.80 wt.%), Y (14.1–16.5 ppm) contents and K<sub>2</sub>O/Na<sub>2</sub>O (0.87–1.12), Sr/Y (44.24–54.90), and La/Yb (36.80–43.88) ratios. Plagioclases as the main mineral phases show a wide range of compositions, and weak normal and reverse zoning. Hornblendes are generally edenite and pargasite (Mg#: 0.39–0.74). Clinopyroxenes are augite (Mg#: 0.58–0.76). Biotites have Mg# ranging from 0.45 to 0.66. The textural and compositional variations indicate disequilibrium crystallization possibly arising from magma mixing. The U–Pb zircon dating of the adakitic volcanics yielded 3.4–1.9 Ma. The studied rocks display moderate light rare earth element /heavy rare earth element ratios and enrichment in the lithophile element and depletion in high field strength element, implying that the parental magmas were derived from mantle sources previously enriched by slab-derived fluids and/or subducted sediments. The crystallization temperature and pressure estimations based on the clinopyroxene thermobarometry range from 1144 to 1186°C and from 3.92 to 7.97 kbar, respectively. Hornblende thermobarometry, oxygen fugacity, and hygrometer calculations yielded results as 908–993°C at a pressure of 2.87–5.22 kbar, water content of 4.4–8.4 wt.%, and relative oxygen fugacity (ΔNNO log units) of −0.6 to 0.9, respectively. Biotite thermobarometry suggests relatively higher oxygen fugacity conditions (10<sup>–13.33</sup> to 10<sup>–17.60</sup>) at temperatures of 676–819°C and at pressures from 1.15 to 1.76 kbar. In the light of the obtained data and modelling, it can be concluded that the magmas of the adakitic volcanics were derived from enriched mantle source through relatively higher partial melting and experienced magma mixing with melts at the crustal level. Additionally, the fractional crystallization and assimilation-fractional crystallization processes may have played an important role during the evolution of the studied volcanics.
DOI: 10.6084/m9.figshare.6143042
title: Literature review and content analysis results.docx

description: Data is a table submitted as a supplemental material for a construction management and economics journal paper titled "Identification and Allocation of Risk Factors Encountered by Water Sector PPP Projects in Egypt." The table shows the results of literature review and content analysis on PPP risks.
DOI: 10.6084/m9.figshare.6143054.v1
title: Geochronology, geochemistry, and petrology of adakitic Pliocene–Quaternary volcanism in the Şebinkarahisar (Giresun) area, NE Turkey

description: The Pliocene–Quaternary volcanics in NE Turkey are mainly hornblende–phyric trachyandesites having a narrow range of SiO<sub>2</sub> from 61.88 to 63.00 wt.% and exhibiting adakitic signatures with their Na<sub>2</sub>O (3.67–4.27 wt.%), Al<sub>2</sub>O<sub>3</sub> (16.19–16.80 wt.%), Y (14.1–16.5 ppm) contents and K<sub>2</sub>O/Na<sub>2</sub>O (0.87–1.12), Sr/Y (44.24–54.90), and La/Yb (36.80–43.88) ratios. Plagioclases as the main mineral phases show a wide range of compositions, and weak normal and reverse zoning. Hornblendes are generally edenite and pargasite (Mg#: 0.39–0.74). Clinopyroxenes are augite (Mg#: 0.58–0.76). Biotites have Mg# ranging from 0.45 to 0.66. The textural and compositional variations indicate disequilibrium crystallization possibly arising from magma mixing. The U–Pb zircon dating of the adakitic volcanics yielded 3.4–1.9 Ma. The studied rocks display moderate light rare earth element /heavy rare earth element ratios and enrichment in the lithophile element and depletion in high field strength element, implying that the parental magmas were derived from mantle sources previously enriched by slab-derived fluids and/or subducted sediments. The crystallization temperature and pressure estimations based on the clinopyroxene thermobarometry range from 1144 to 1186°C and from 3.92 to 7.97 kbar, respectively. Hornblende thermobarometry, oxygen fugacity, and hygrometer calculations yielded results as 908–993°C at a pressure of 2.87–5.22 kbar, water content of 4.4–8.4 wt.%, and relative oxygen fugacity (ΔNNO log units) of −0.6 to 0.9, respectively. Biotite thermobarometry suggests relatively higher oxygen fugacity conditions (10<sup>–13.33</sup> to 10<sup>–17.60</sup>) at temperatures of 676–819°C and at pressures from 1.15 to 1.76 kbar. In the light of the obtained data and modelling, it can be concluded that the magmas of the adakitic volcanics were derived from enriched mantle source through relatively higher partial melting and experienced magma mixing with melts at the crustal level. Additionally, the fractional crystallization and assimilation-fractional crystallization processes may have played an important role during the evolution of the studied volcanics.
DOI: 10.6084/m9.figshare.6142865
title: Mouse fetal e12 coronary progenitor scRNAseq Seurat object

description: mouse fetal coronary progenitors, e12, scRNAseq, generated by FACS-based isolation of single cells from fetal mouse hearts lineage-labelled with Apj-CreER tamoxifen injected at e11, amplified by the Smart-Seq2 protocol.<br>Seurat object.
DOI: 10.6084/m9.figshare.6142865.v1
title: Mouse fetal e12 coronary progenitor scRNAseq Seurat object

description: mouse fetal coronary progenitors, e12, scRNAseq, generated by FACS-based isolation of single cells from fetal mouse hearts lineage-labelled with Apj-CreER tamoxifen injected at e11, amplified by the Smart-Seq2 protocol.<br>Seurat object.
DOI: 10.6084/m9.figshare.6142811
title: ICT4D Water quality measurement device - Data

description: The two files contain the raw sensor data, from both the first as the second iteration of the device.
DOI: 10.6084/m9.figshare.6142811.v1
title: ICT4D Water quality measurement device - Data

description: The two files contain the raw sensor data, from both the first as the second iteration of the device.
DOI: 10.6084/m9.figshare.6142808
title: Análisis de la cuenta de Twitter de Maldito Bulo

description: El trabajo presenta un análisis de contenido basado en los primeros 3000 tuits publicados por la cuenta de Twitter de Maldito Bulo. El libro de código trabaja sobre métricas de análisis de los tuits compartidos, el tipo de cuentas que se retuitean, el uso de los hashtag, etc.
DOI: 10.6084/m9.figshare.6142808.v1
title: Análisis de la cuenta de Twitter de Maldito Bulo

description: El trabajo presenta un análisis de contenido basado en los primeros 3000 tuits publicados por la cuenta de Twitter de Maldito Bulo. El libro de código trabaja sobre métricas de análisis de los tuits compartidos, el tipo de cuentas que se retuitean, el uso de los hashtag, etc.
DOI: 10.6084/m9.figshare.6142643
title: Data.xls

description: Paraquat
DOI: 10.6084/m9.figshare.6142643.v1
title: Data.xls

description: Data for paraquat
DOI: 10.6084/m9.figshare.6142631
title: PLOS_ONE_2018.zip

description: This file contains the dataset and R codes used in Honjo et al. (2018) published in PLOS ONE.<br>
DOI: 10.6084/m9.figshare.6142631.v1
title: PLOS_ONE_2018.zip

description: This file contains the dataset and R codes used in Honjo et al. (2018) published in PLOS ONE.<br>
DOI: 10.6084/m9.figshare.6142595
title: An illustrated guide of ferns and lycophytes from Carambeí, PR, Brazil

description: <b>An illustrated guide of ferns and lycophytes from Carambeí, PR, Brazil - </b>We present a list of species of ferns and lycophytes from Carambeí, a municipality located in Paraná State, southern Brazil. This area, locally known as “Campos Gerais”, presents an intricate mosaic of forests and savannah with several canyons and humid valleys that harbors a rich and unique vegetation in Southern Brazil.<br>
DOI: 10.6084/m9.figshare.6142595.v1
title: An illustrated guide of ferns and lycophytes from Carambeí, PR, Brazil

description: <b>An illustrated guide of ferns and lycophytes from Carambeí, PR, Brazil - </b>We present a list of species of ferns and lycophytes from Carambeí, a municipality located in Paraná State, southern Brazil. This area, locally known as “Campos Gerais”, presents an intricate mosaic of forests and savannah with several canyons and humid valleys that harbors a rich and unique vegetation in Southern Brazil.<br>
DOI: 10.6084/m9.figshare.6142373
title: Pollination effectiveness of opportunistic Galápagos birds compared to that of insects: from fruit set to seedling emergence

description: Census of flower visitors and selective exclusion experiments.
DOI: 10.6084/m9.figshare.6142373.v1
title: Pollination effectiveness of opportunistic Galápagos birds compared to that of insects: from fruit set to seedling emergence

description: Census of flower visitors and selective exclusion experiments.
DOI: 10.6084/m9.figshare.6142322
title: GFF file, CDS and Protein Sequences.rar

description: <b>Genome annotation data of earthworm <i>Eisenia fetida</i></b>
DOI: 10.6084/m9.figshare.6142319
title: Table S4 from Cornet et al. Consensus assessment of the contamination level of publicly available cyanobacterial genomes.

description: <b>This Excel file is Table S</b><b>4</b><b>: Taxonomic analysis of the scaffolds of the assemblies in the top-21 ranking. </b>The table gives the DIAMOND blastx taxonomic classifications (in %, at the phylum level) of each scaffold of the top-21 assemblies (one sheet per assembly). For each scaffold, the GC-content (in %) and the scaffold length (in nt) are also reported.<b></b>
DOI: 10.6084/m9.figshare.6142319.v2
title: Table S4 from Cornet et al. Consensus assessment of the contamination level of publicly available cyanobacterial genomes.

description: <b>This Excel file is Table S</b><b>4</b><b>: Taxonomic analysis of the scaffolds of the assemblies in the top-21 ranking. </b>The table gives the DIAMOND blastx taxonomic classifications (in %, at the phylum level) of each scaffold of the top-21 assemblies (one sheet per assembly). For each scaffold, the GC-content (in %) and the scaffold length (in nt) are also reported.<b></b>
DOI: 10.6084/m9.figshare.6142319.v1
title: Table S4 from Cornet et al. Consensus assessment of the contamination level of 440 publicly available cyanobacterial genomes.

description: <b>This Excel file is Table S</b><b>4</b><b>: Taxonomic analysis of the scaffolds of the assemblies in the top-21 ranking. </b>The table gives the DIAMOND blastx taxonomic classifications (in %, at the phylum level) of each scaffold of the top-21 assemblies (one sheet per assembly). For each scaffold, the GC-content (in %) and the scaffold length (in nt) are also reported.<b></b>
DOI: 10.6084/m9.figshare.6142307
title: To B or Not to B: Comparative Genomics Suggests Arsenophonus as a Source of B Vitamins in Whiteflies - Supplementary Data

description: PatwayTools generated databases of <i>Bemisia tabaci</i>, <i>Arsenophonus</i>, <i>Wolbachia</i> and <i>Portiera</i> from <i>Aleurodicus dispersus</i>, <i>Aleurodicus floccissimus</i> and <i>Trialeurodes vaporariorum</i>.<br>Key cofactors/vitamins metabolic proteins Blastx results for <i>Aleurodicus dispersus</i>, <i>Aleurodicus floccissimus</i> and <i>Trialeurodes vaporariorum </i>genomic<i> </i>reads<i> </i>classified as Artrhopoda or <i>Bemisa tabaci</i>.<br><i></i>
DOI: 10.6084/m9.figshare.6142307.v1
title: To B or Not to B: Comparative Genomics Suggests Arsenophonus as a Source of B Vitamins in Whiteflies - Supplementary Data

description: PatwayTools generated databases of <i>Bemisia tabaci</i>, <i>Arsenophonus</i>, <i>Wolbachia</i> and <i>Portiera</i> from <i>Aleurodicus dispersus</i>, <i>Aleurodicus floccissimus</i> and <i>Trialeurodes vaporariorum</i>.<br>Key cofactors/vitamins metabolic proteins Blastx results for <i>Aleurodicus dispersus</i>, <i>Aleurodicus floccissimus</i> and <i>Trialeurodes vaporariorum </i>genomic<i> </i>reads<i> </i>classified as Artrhopoda or <i>Bemisa tabaci</i>.<br><i></i>
DOI: 10.6084/m9.figshare.6142148
title: 流速流向

description: file
DOI: 10.6084/m9.figshare.6142148.v1
title: 流速流向

description: file
DOI: 10.6084/m9.figshare.6142139.v1
title: Additional file 8: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

description: Alternative splicing events (total and only significant events in CONV-R versus GF) in the three developmental stages. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.6142133.v1
title: Additional file 6: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

description: Gene ontology (GO) analysis of the microbially regulated genes from each developmental stage. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.6142127.v1
title: Additional file 4: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

description: Gene expression data of small intestinal epithelial cells from germ-free (GF) and conventionally raised (CONV-R) mice at the three developmental stages W1, W4, and W12/16 determined by RNA sequencing. (XLSX 9442 kb)
DOI: 10.6084/m9.figshare.6142118.v1
title: Additional file 2: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

description: R code used for the integrated analysis shown in Fig. 5a. (R 1 kb)
DOI: 10.6084/m9.figshare.6142112.v1
title: Additional file 1: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

description: List of primers used for validation experiment (qPCR and amplicon sequencing). (XLSX 49 kb)
DOI: 10.6084/m9.figshare.6142106.v1
title: Additional file 19: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

description: Validation of a subset of differentially expressed and methylated genes. Small intestinal epithelial tissue was harvested by scraping from an independent cohort of GF and CONV-R mice from another gnotobiotic animal facility and both DNA and RNA were isolated for qPCR expression analysis and targeted methylation analysis using amplicon sequencing. Asterisks denote observations in the validation data that showed the same trend/direction as in the initial data, but were only very close to reaching the significance threshold after correction for multiple testing and therefore were considered as validation. (XLSX 48 kb)
DOI: 10.6084/m9.figshare.6142094.v1
title: Additional file 17: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

description: List of differentially expressed genes (CONV-R versus GF) that also contain DMPs as depicted in Additional file 13. (XLSX 45 kb)
DOI: 10.6084/m9.figshare.6142091
title: Additional file 1 of ZBP-89 and Sp1 contribute to Bak expression in hepatocellular carcinoma cells

description: Table S1. Table summary of available patient and chemotherapy information. The supplemental table showed individual HCC patient and treatment one received, and also the therapy duration time since the initial treatment. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.6142091.v1
title: Additional file 1 of ZBP-89 and Sp1 contribute to Bak expression in hepatocellular carcinoma cells

description: Table S1. Table summary of available patient and chemotherapy information. The supplemental table showed individual HCC patient and treatment one received, and also the therapy duration time since the initial treatment. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.6142079.v1
title: Additional file 14: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

description: Methylation levels of microbiota- (CONV-R versus GF) and development-dependent (W1 versus W4 versus W12/16) DMPs. Hierarchical clustering resulted in ten DMP groups. (XLSX 203 kb)
DOI: 10.6084/m9.figshare.6142046
title: Additional file 6: of Transcriptome-wide identification of optimal reference genes for expression analysis of Pyropia yezoensis responses to abiotic stress

description: Table S1. Pairwise variation (Vn/nâ +â 1) analysis of 9 candidate. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.6142046.v1
title: Additional file 6: of Transcriptome-wide identification of optimal reference genes for expression analysis of Pyropia yezoensis responses to abiotic stress

description: Table S1. Pairwise variation (Vn/nâ +â 1) analysis of 9 candidate. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.6142040.v1
title: Additional file 10: of Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

description: Gene ontology (GO) analysis of the co-expressed genes in different selected groups from Fig. 3. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.6142037
title: Additional file 1: of Limitation of life support techniques at admission to the intensive care unit: a multicenter prospective cohort study

description: Table S1. Hospital characteristics. Table S2. Patient characteristics. Table S3. Reasons for limitations on life support at admission to the ICU. Table S4. Bivariate analysis. Patient characteristics associated with LLST. Crude odds ratio (OR) and 95% confidence interval. Table S5. Bivariate analysis. Hospital characteristics associated with LLST. Crude odds ratio (OR) and 95% confidence interval. Figure S1. Thirty-day overall survival function according to the specific support measures limited and the type of limitation. (RTF 56201 kb)
DOI: 10.6084/m9.figshare.6142037.v1
title: Additional file 1: of Limitation of life support techniques at admission to the intensive care unit: a multicenter prospective cohort study

description: Table S1. Hospital characteristics. Table S2. Patient characteristics. Table S3. Reasons for limitations on life support at admission to the ICU. Table S4. Bivariate analysis. Patient characteristics associated with LLST. Crude odds ratio (OR) and 95% confidence interval. Table S5. Bivariate analysis. Hospital characteristics associated with LLST. Crude odds ratio (OR) and 95% confidence interval. Figure S1. Thirty-day overall survival function according to the specific support measures limited and the type of limitation. (RTF 56201 kb)
DOI: 10.6084/m9.figshare.6142031
title: Additional file 4: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S3. The number of aligned reads in a search of the NCBI nt database using 10,000 randomly selected unmapped reads. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.6142031.v1
title: Additional file 4: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S3. The number of aligned reads in a search of the NCBI nt database using 10,000 randomly selected unmapped reads. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.6141986
title: Additional file 3: of The phospholipase DDHD1 as a new target in colorectal cancer therapy

description: Table S1. Data from SWATH-MS Gene Ontology analysis. (XLSX 740Â kb)
DOI: 10.6084/m9.figshare.6141986.v1
title: Additional file 3: of The phospholipase DDHD1 as a new target in colorectal cancer therapy

description: Table S1. Data from SWATH-MS Gene Ontology analysis. (XLSX 740Â kb)
DOI: 10.6084/m9.figshare.6141962
title: Additional file 19: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S13. GO terms enriched with the specific genes expressed in the first-day embryos of A. cerana. and A. mellifera.. (XLSX 25Â kb)
DOI: 10.6084/m9.figshare.6141962.v1
title: Additional file 19: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S13. GO terms enriched with the specific genes expressed in the first-day embryos of A. cerana. and A. mellifera.. (XLSX 25Â kb)
DOI: 10.6084/m9.figshare.6141932
title: Additional file 2: of Population-level distribution and putative immunogenicity of cancer neoepitopes

description: Table S5. Contains allele sets tested and associated epitope counts from analysis on overlap of epitope preference among HLA alleles. (XLSX 65Â kb)
DOI: 10.6084/m9.figshare.6141932.v1
title: Additional file 2: of Population-level distribution and putative immunogenicity of cancer neoepitopes

description: Table S5. Contains allele sets tested and associated epitope counts from analysis on overlap of epitope preference among HLA alleles. (XLSX 65Â kb)
DOI: 10.6084/m9.figshare.6141926
title: Additional file 18: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S12. Comparison of our A. cerana. Day1 embryonic transcriptome with the previously reported A. mellifera. Day1 embryonic transcriptome. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.6141926.v1
title: Additional file 18: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S12. Comparison of our A. cerana. Day1 embryonic transcriptome with the previously reported A. mellifera. Day1 embryonic transcriptome. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.6141899
title: Additional file 16: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S11. GO terms enriched by the six different classes of DEGs during the embryonic development. (XLSX 149Â kb)
DOI: 10.6084/m9.figshare.6141899.v1
title: Additional file 16: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S11. GO terms enriched by the six different classes of DEGs during the embryonic development. (XLSX 149Â kb)
DOI: 10.6084/m9.figshare.6141878
title: Additional file 4: of A phylogenomic framework and timescale for comparative studies of tunicates

description: Supporting data. Transcriptome assemblies, alignments, and trees. (ZIP 38502 kb)
DOI: 10.6084/m9.figshare.6141878.v1
title: Additional file 4: of A phylogenomic framework and timescale for comparative studies of tunicates

description: Supporting data. Transcriptome assemblies, alignments, and trees. (ZIP 38502 kb)
DOI: 10.6084/m9.figshare.6141848
title: Additional file 13: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S10. KEGG pathways enriched with the specific genes expressed in the first-, second- and third-day embryos. (XLS 9Â kb)
DOI: 10.6084/m9.figshare.6141848.v1
title: Additional file 13: of Dynamic transcriptome landscape of Asian domestic honeybee (Apis cerana) embryonic development revealed by high-quality RNA sequencing

description: Table S10. KEGG pathways enriched with the specific genes expressed in the first-, second- and third-day embryos. (XLS 9Â kb)
DOI: 10.6084/m9.figshare.6141833
title: Additional file 2: of Stereotactic body radiation therapy using a respiratory-gated volumetric-modulated arc therapy technique for small hepatocellular carcinoma

description: Raw data of the treated lesions. Lesion characteristics and follow-up data exists. (XLSX 17Â kb)