cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14378477.v1
title: Attacks Against Missions Database

description: The Attacks Against Missions Database contains data about attacks against diplomatic and consular representations which occurred between 1945 and 2020.
DOI: 10.6084/m9.figshare.15411231.v1
title: Multidisciplinarity of Artificial Intelligence Research: dataset

description: The dataset describes the multidisciplinary dynamics of the field Artificial Intelligence during the last 60 years, based on the scientific output and bibliometric indicators. @font-face {font-family:"Cambria Math"; panose-1:2 4 5 3 5 4 6 3 2 4; mso-font-charset:0; mso-generic-font-family:roman; mso-font-pitch:variable; mso-font-signature:-536870145 1107305727 0 0 415 0;}p.MsoNormal, li.MsoNormal, div.MsoNormal {mso-style-unhide:no; mso-style-qformat:yes; mso-style-parent:""; margin:0cm; mso-pagination:widow-orphan; font-size:12.0pt; font-family:"Times New Roman",serif; mso-fareast-font-family:"Times New Roman";}.MsoChpDefault {mso-style-type:export-only; mso-default-props:yes; font-family:"Calibri",sans-serif; mso-ascii-font-family:Calibri; mso-ascii-theme-font:minor-latin; mso-fareast-font-family:Calibri; mso-fareast-theme-font:minor-latin; mso-hansi-font-family:Calibri; mso-hansi-theme-font:minor-latin; mso-bidi-font-family:"Times New Roman"; mso-bidi-theme-font:minor-bidi; mso-fareast-language:EN-US;}div.WordSection1 {page:WordSection1;}
DOI: 10.6084/m9.figshare.23964216.v2
title: The data related correlation between health literacy and pesticide protective behaviors of farmers in Thailand.

description: The data-related research entitled, correlation between health literacy and pesticide protective behaviors of farmers in Thailand.
DOI: 10.6084/m9.figshare.26493139.v1
title: T2DM SCREEN baseline

description: Population-based study conducted in the north of Peru (Tumbes) to evaluate the association between glycemis status and oral health (periodontal disease). Participant's assessment included sociodemographic factors as well as blood sampling using oral glucose tolerance test.
DOI: 10.6084/m9.figshare.28871060.v1
title: Assessment of ML Models for PSM: RW Clinical Data Collection

description: Assessment of ML Models for PSM in RW Clinical Data Collection
DOI: 10.17632/p3m8776742
title: Systematic mapping of nuclear domain-associated transcripts reveals speckles and lamina as hubs of functionally distinct populations of retained introns

description: Raw files for microscopy and western blot data presented in this study.

SUMMARY
The nucleus is highly compartmentalized through the formation of distinct classes of non-membranous domains, yet the composition and function of many of these structures is not well understood. Using APEX2-mediated proximity labelling and RNA sequencing, we surveyed transcripts associated with nuclear speckles, several additional domains, and the lamina. Remarkably, speckles and lamina are associated with distinct classes of retained introns enriched in genes that function in RNA processing, translation, and the cell cycle. In contrast to the lamina-proximal introns, retained introns associated with speckles are relatively short, GC-rich, and enriched for functional sites of RNA binding proteins that are concentrated in these domains. They are also highly differentially regulated across diverse cellular contexts, including the cell cycle. Our study thus provides a resource of nuclear domain-associated transcripts and further reveals speckles and lamina as hubs of distinct populations of retained introns linked to gene regulation and cell cycle progression.
DOI: 10.17632/scjgck7398
title: watermelon data for publication

description: Watermelon data for publication in data in brief
DOI: 10.6084/m9.figshare.26023849.v2
title: Warmer climate reduces the carbon storage, stability and saturation levels in forest soils [Dataset]

description: The data that support the findings of Warmer climate reduces the carbon storage, stability and saturation levels in forest soils.
DOI: 10.17632/3j3tmghw33
title: Endoscopic real-synthetic over- and underexposed frames for image enhancement

description: ------------------------------------------------------------------------------------------------------------------------------------------------------
For more information about this dataset please refer to our paper: https://arxiv.org/pdf/2207.02396.pdf
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In endoscopy examinations, it is very common to come across with exposure errors due to light reflexions in the inner walls of the hollow organs. For instance, when the tip of the endoscope  (which has a light) points to folds, these structures reflect the light, provoking overexposure, and whereas, an underexposed region at the other end of the frame can appear. This can be a big problem for physicians since they are fully responsible of detecting anomalies, blood, or even polyps, that could be translated in warning cases. Currently, methods for enhancing exposure errors need paired data, i.e., corrupted frames and their respective ground-truth (i.e., non-corrupted or clean image). For instance, for natural images the LOL or MIT-Adobe FiveK datasets, which contain common real life images have been proposed. These paired datasets allow researchers to both train and evaluate their models making use of standardized ground-truth images. To the best of our knowledge, in endoscopic domain,  there are not publicly available in the literature. This is due to the difficulty of producing the same frame with and without exposures errors, naturally or with the help of a photo editing expert. Hence, our work aimed to create, through the use of GANs, a paired dataset of real images without any exposure error and the same image with an exposure error, that is a corrupted frame and its ground-truth. 

This dataset consists of three separate datasets containing i) normal endoscopic frames (without exposure errors), ii) synthetic overexposed frames, and iii) synthetic underexposed frames. Therefore, we have 1,231 real-overexposed pairs and 985 real-underexposed pairs; 2,216 paired frames in total, i.e., 4432 frames. Since our method for creating the synthetic data was stochastic, the distribution through the data varied in exposure intensity.
DOI: 10.6084/m9.figshare.15506415.v1
title: Hinfp is a guardian of somatic genomes by repressing transposable elements

description: Gene expression profile excel for Histone genes and heterochromatic genes in Hinfp mutants
DOI: 10.6084/m9.figshare.20477022.v3
title: Dataset for real-time anomaly detection for an ADMM-based optimal transmission frequency management system for IoT edge devices

description: The data collected from ADMM-based transmission frequency management system. The system consists of 3 edge devices and a gateway. The data includes key parameters of the system which is used for detecting the anomalies, which can lead to incorrect transmission frequencies. If the dataset is helpful, please use and cite Wu, H.; O’Connor, N.E.; Bruton, J.; Hall, A.; Liu, M. Real-Time Anomaly Detection for an ADMM-Based Optimal Transmission Frequency Management System for IoT Devices. Sensors 2022, 22, 5945. https://doi.org/10.3390/s22165945 <br>
DOI: 10.4121/uuid:aa0ed483-701e-4ba0-b7b0-674695f5f7a7
title: Data underlying the research on Seasonal and interannual variation in evapotranspiration, energy flux, and Bowen ratio over a dry semi-humid cropland in Northwest China

description: In this dataset, we report on five years of energy flux measurements observed by EC over the Guanzhong Plain cropland. The objectives of this study were to (1) characterize seasonal variation in ET and its components in order to identify the important controlling environmental factors; (2) investigate seasonal variation in energy fluxes and determine the energy budget; and (3) assess the effects of crop growth on ET, Bowen ratio (β), the Priestley-Taylor coefficient (α), and canopy conductance (Gc) and examine the relationships between Gc and other surface parameters.
DOI: 10.6084/m9.figshare.19840249.v1
title: Supplementary Material for: Impact of Region-of-Interest Size on Immune Profiling Using Multiplex Immunofluorescence Tyramide Signal Amplification for Paraffin-Embedded Tumor Tissues

description: <b><i>Introduction:</i></b> Representative regions of interest (ROIs) analysis from the whole slide images (WSI) are currently being used to study immune markers by multiplex immunofluorescence (mIF) and single immunohistochemistry (IHC). However, the amount of area needed to be analyzed to be representative of the entire tumor in a WSI has not been defined. <b><i>Methods:</i></b> We labeled tumor-associated immune cells by mIF and single IHC in separate cohorts of non-small cell lung cancer (NSCLC) samples and we analyzed them as whole tumor area as well as using different number of ROIs to know how much area will be need to represent the entire tumor area. <b><i>Results:</i></b> For mIF using the InForm software and ROI of 0.33 mm<sup>2</sup> each, we observed that the cell density data from five randomly selected ROIs is enough to achieve, in 90% of our samples, more than 0.9 of Spearman correlation coefficient and for single IHC using ScanScope tool box from Aperio and ROIs of 1 mm<sup>2</sup> each, we found that the correlation value of more than 0.9 was achieved using 5 ROIs in a similar cohort. Additionally, we also observed that each cell phenotype in mIF influence differently the correlation between the areas analyzed by the ROIs and the WSI. Tumor tissue with high intratumor epithelial and immune cells phenotype, quality, and spatial distribution heterogeneity need more area analyzed to represent better the whole tumor area. <b><i>Conclusion:</i></b> We found that at minimum 1.65 mm<sup>2</sup> area is enough to represent the entire tumor areas in most of our NSCLC samples using mIF.
DOI: 10.6084/m9.figshare.28457567.v1
title: Trait response to P_figshare.rar

description: This a dataset and r code for the paper"trait specific response for P-addition across global forests".
DOI: 10.6084/m9.figshare.14371571.v1
title: Diversification linked to larval host plant in the butterfly Eumedonia eumedon

description: Loci and SNPs alignments used.<br>
DOI: 10.6084/m9.figshare.27931482.v1
title: Chapter 5 - Experimental Results - Links for Functional Enrichment Analysis

description: Transcriptomic fingerprints in the heterogeneous response of skin fibroblasts to oxidants.
DOI: 10.6084/m9.figshare.28670033.v1
title: Global High-Resolution Dataset of Extreme Climate Events and Gross Primary Productivity (2000–2019)

description: Global annual dataset (2000–2019) linking extreme climate events (heatwaves, cold spells, droughts, heavy rainfall) to vegetation productivity (GPP), with key variables: downward shortwave radiation (DSWRF), latent heat flux (LHF), precipitation rate (prate), and extreme event days. Essential for validating climate-carbon feedback models and regional adaptation planning.
DOI: 10.6084/m9.figshare.7676651.v1
title: Field compaction control by way of correlation between elasticity module and layer rigidity with moisture content

description: Abstract The present research had as its basic objective to contribute with the improvement in the quality control evaluation of the compacting process in road works. The real contribution of the survey is to establish an innovative way of controlling the compaction process in the field, with employment of the Humidity versus Rigidity and the Humidity versus Elasticity Module curves, turning the methodology faster and more efficient than the conventional procedures. In fact, to date, the compacting control procedures contemplate methods that are inaccurate and limited by several constraints, rendering the technique unfeasible and time consuming, in detriment of the work schedule. Thus, this study proposes to define a rational correlation criterion between the geotechnical characterization with results obtained in the laboratory using conventional methods and the elastic parameters obtained by applying the rigidity meter of compacted soils, based on a statistical treatment of data concerning the infrastructure of experimental road and railway sections. The results obtained in the research were the correlation curves for Humidity versus Rigidity, and for Humidity versus Elasticity Module, for the material of the deposit, with the corresponding equations. Thenceforth, with the correlation curves, it will be much easier to obtain the moisture content that the soil requires on the earthworks. By measuring the modulus of elasticity or rigidity through the stiffness meter of compacted soils, the respective curve checks if the value of the soil moisture content is compatible with the variation of the moisture content in the project.
DOI: 10.6084/m9.figshare.21602340.v1
title: Supplementary Material for: Trabecular bone score as an index of bone fragility in patients with acromegaly: a systematic review and meta-analysis

description: Background. Acromegaly is characterized by impaired bone quality and increased fracture risk. However, due to the pathophysiology of acromegalic osteopathy, bone mineral density (BMD) does not represent a reliable predictor for fragility fractures in this setting. Trabecular bone score (TBS) has been recently evaluated as an alternative index of skeletal fragility in acromegalic patients. However, no conclusive data are still available in this regard. Methods. PubMed/Medline, EMBASE, Cochrane library, Ovid and CINAHL databases were systematically searched until June 2022 for studies reporting data either about the comparison of TBS values between acromegalic patients and non-acromegalic controls, or about the relationship – within acromegalic patients – between TBS values and fracture risk. Effect sizes were pooled through a random-effect model. Results. Eight studies were eligible for inclusion in the meta-analysis, encompassing 336 acromegalic patients and 490 non-acromegalic controls. Overall, TBS was significantly lower in acromegalic patients compared to controls (-0.089, 95%CI: {-0.111,-0.067}, p&lt;0.01), irrespectively to acromegaly disease activity and gonadal status. With respect to fracture risk, TBS was significantly lower in acromegalic patients with vertebral fractures than in those without (-0.099, 95%CI: {-0.166,-0.032}, p&lt;0.01). Conclusion. In this meta-analysis, we specifically assessed the role of TBS as an index of bone quality and fracture risk in patients with acromegaly. Our results support the notion that TBS could be of value in the assessment and management of skeletal fragility in acromegalic patients, especially in light of the poor information provided in this setting by BMD.
DOI: 10.6084/m9.figshare.5558491.v1
title: Data Figure 4

description: Fitting of different hypothesis models to PHO2 data.
DOI: 10.17632/9kxx8kp7db
title: Free Vibrations on Simple Beams Using Python

description: An illustrative tool that simulates free vibrations on simple beams. 

github: https://github.com/abdallatalaat/free-vibrations
DOI: 10.17632/w399pzhw5y
title: Protectionism and the Business Cycle

description: Replication files for “Protectionism and the Business Cycle” by Alessandro Barattieri, Matteo Cacciatore, and Fabio Ghironi, Journal of International Economics
DOI: 10.17632/2kty6pk2j8
title: Data for: Consumer categorization of plant-based dishes: implications for promoting vegetable consumption

description: Pictures of plant-based dishes used in the study
DOI: 10.17632/88vvxk4ydp
title: Dataset of Historical Elections in Catalonia (DHEC)

description: The Dataset of Historical Elections in Catalonia Catalonia (DHEC), a unique and newly collected dataset that sheds light on micro-level historical electoral records in Catalonia. The DHEC contains electoral data both at the census-tract and municipality-level for all elections comprised between the enactment of universal male suffrage (1890) until a military coup put an end to regular elections (1923). It also contains Geographic Information System (GIS) data referring to municipality-level and electoral district-level divisions throughout the period.
DOI: 10.25573/data.13341605.v1
title: Fungi Panama 2020

description: taxonID (Index Fungorum Registration Identifier) scientificName taxonomicStatus acceptedTaxonID acceptedScientificName synonymTaxonID synonymScientificName kingdom division class order family cf./aff. genus specificEpithet scientificNameAuthorship newly described species from Panama ecology substrate/host comments Reference1 Reference2 Reference3 Reference4 Reference5 Reference6 Reference7 Reference8 Reference9 Reference10 Reference11 Provinces Barro Colorado Island (BCI) Bocas del Toro (BO) Canal Zone (not BCI) (CA) Chiriquí (CH) Coclé (CC) Coiba (COI) Colón (CN) Darien (DA) Herrera (HE) Guna Yala (GY) Los Santos (LS) Ngöbe Buglé (NB) Panamá (not CA or BCI) (PA) Panama Oeste (not CA or BCI) (PO) Veraguas (VR)
DOI: 10.6084/m9.figshare.14754309.v4
title: Dataset (GAN)

description: The Ekush dataset has been applied in our work which is publicly available at https://shahariarrabby.github.io/ekush/. There are two proposed methods- DCGAN(Deep Convolutional Generative Adversarial Network ) and Outlier. The outlier removed classes dataset has been given as named Dataset(outlier_removed).zip. For DCGAN, five classes have been used as there contains more imbalanced dataset. DCGAN_Generated_Images.zip contains the datasets of DCGAN generated images. Three datasets have been classified in this experiment using the ResNet-50 classifier. These three approaches datasets are split into three sets - train, validation, and test. First, the original dataset found in Dataset(original).zip has been used in the classifier. Then the outlier removed classes created in Dataset(outlier_removed).zip with the rest of the original dataset has used. Finally, together with DCGAN generate images and outlier removed classes created in Dataset(DCGAN_applied).zip with the other classes of the dataset used in the classifier. <br>
DOI: 10.6084/m9.figshare.28282943.v2
title: Stereo olfaction underlies stable coding of head direction in blind mice

description: Dataset and code from Asumbisa et al., Nature Communications, 2025.
DOI: 10.6084/m9.figshare.3027553.v1
title: Surface model of a slab containing the natural casts of the theropod dinosaur footprint T3/22 and the ornithopod dinosaur footprints I1/16 to I1/17 at Münchehagen (Lower Cretaceous, Germany)

description: Textured surface model of a slab containing the natural casts of the theropod dinosaur footprint T3/22 and the ornithopod dinosaur footprints I1/16 to I1/17, from Münchehagen (Lower Cretaceous, Germany).
DOI: 10.6084/m9.figshare.5127196.v1
title: Supplementary Material for: Impact of Baroreflex Activation Therapy on Renal Function - A Pilot Study

description: <b><i>Background/Aims:</i></b> Resistant hypertension and chronic kidney disease (CKD) are interlinked via sympathetic overdrive. Baroreflex activation therapy (BAT) has been shown to chronically reduce blood pressure (BP) in patients with resistant hypertension. The effect of BAT on renal function in CKD patients with resistant hypertension has not been reported. The aim of this study was to investigate the effect of sympathetic inhibition on renal function in CKD patients. <b><i>Methods:</i></b> 23 CKD patients with resistant hypertension were prospectively treated with BAT. Analyses were performed before and 6 months after the start of BAT. The renal function was analyzed by creatinine, cystatin C, glomerular filtration rate (GFR), renin, aldosterone, fractioned and 24-hour sodium excretion and analyses of urine marker proteins. The purpose of the control group was to investigate the influence of treating patients in a center for hypertension and regression to the mean on investigated variables. <b><i>Results:</i></b> The office mean BP decreased from 116.9 ± 20.9 mm Hg to 104.2 ± 22.2 mm Hg (p &lt; 0.01), while the number of prescribed antihypertensive classes decreased from 6.6 ± 1.6 to 6.1 ± 1.7 (p = 0.02). Proteinuria and albuminuria decreased from a median of 283.9 and 47.7 to 136.5 (p = 0.01) and 45.0 mg/g creatinine (p = 0.01) with pronounced effects in higher CKD stage III + IV compared to I + II (p &lt; 0.01). CKD-EPI cystatin C equation improved from 53.6 ± 22.7 to 60.4 ± 26.1 ml/min (p = 0.02). While creatinine and GFR were impaired after a period of 6 months, no changes of proteinuria, albuminuria, or BP were obtained in control patients. <b><i>Conclusion:</i></b> The data of this prospective trial demonstrate potential nephroprotective effects of BAT in therapy-resistant hypertension in CKD patients by a reduction of BP, proteinuria and moreover, a stabilization of estimated GFR.
DOI: 10.6084/m9.figshare.5745723.v1
title: Long-term ecological monitoring data from New Zealand (and elsewhere), 2003–2017 (Draft)

description: The natural environment is changing rapidly in response to human land use changes, species invasions, and climate changes. This dataset is my contribution to documenting these changes.<br><br>It includes my observations since 2003 along many repeatedly travelled transects, as well as one-off site surveys. Using standardised methods, I count birds, mammals (mostly as roadkill), and selected invertebrates (including all butterflies), plants (including flowering phenology), fungi, and other species. I live in Christchurch, New Zealand, and work in the nearby town of Lincoln, New Zealand, so most observations are in this area. <br><br>Be warned that the data available here is in an unfinished state. I am making it available now (Dec. 2017) as insurance should something happen to me. My observations are a combination of time-stamped and geotagged audio notes (made while cycling or running) and text notes entered in a shorthand of my own design (fully documented here). The audio notes are being transcribed into the same shorthand format and I am close to completing the R scripts that will expand out the shorthand into a full dataset. There will be over a million observations available once the transcription and translation is complete.<br><br>The recording period includes a variety of both graduated and punctuated environmental changes in the wider Christchurch area. These include the devastating Christchurch earthquakes of 2010–2011, a large increase in traffic volumes and housing in Christchurch's satellite towns like Lincoln especially since the earthquakes, the largest local snow storm in a century in July 2011, a massive fire in the Christchurch Port Hills in February 2017, and a five-fold increase in dairy cows and associated irrigation in the surrounding farmland.<br><br>Collecting and curating these observations has been a massive undertaking and I have outlines for a number of publications on trends from the data. If you plan on using it for your research, please contact me first (jon.sullivan@lincoln.ac.nz). You'll benefit from my help interpreting the data and I'd appreciate being considered for authorship on publications that make substantial use of this data.<br><br>I plan to update this dataset as it grows and as I make progress on the curation, transcription, and translation of the data.<br><br>The photos and audio recordings referred to comments on my observations are online at http://naturewatch.org.nz/observations/jon_sullivan (and http://inaturalist.org/observations/jon_sullivan). (If they're not, they're part of my backlog that I'm still uploading.)<br><br>I described an earlier version of the methods used in Sullivan, J. J. 2012. Recording birds in real time: a convenient method for frequent bird recording. New Zealand Journal of Ecology, 36:416–424. (http://newzealandecology.org/nzje/3057)<br><br>The Filemaker Go app I built to record all my observations is available on Github at https://github.com/mjon/Watcher