DOI: 10.5061/dryad.08kprr508
title: Data from: Piping Plover population increase after Hurricane Sandy mediated by immigration and reproductive output

description: Evaluating population-level responses to conservation action following
 large-scale disturbance can improve the efficacy of future habitat
 conservation measures. In October 2012, Hurricane Sandy storm surges
 cleared vegetation and opened inlets through the barrier islands, Fire
 Island and Westhampton Island, New York, creating Piping Plover
 (Charadrius melodus) habitat. Storm effects prompted an island-wide
 stabilization project, which had the potential to negatively affect novel
 Piping Plover habitat. Certain sections of Fire Island were designed to
 create and/or improve habitat (hereafter, restoration areas) to mitigate
 possible habitat loss or degradation. Since Piping Plovers in New York
 appear to be habitat-limited, we anticipated positive population growth
 following habitat creation. From 2013–2018, we captured and banded 152
 adults and 353 chicks, and monitored 279 nests and 160 broods. We
 developed an integrated population model to assess demographic processes
 in response to hurricane created-habitat (2013–2018) and the creation of
 restoration areas (2015–2018). We observed positive population growth in
 three of five years, and overall growth through the period (λ =1.13).
 Immigration and reproductive output were correlated with population growth
 (r = 0.92 [95% CI = 0.22–0.98], and 0.84 [95% CI = -0.47–0.95],
 respectively). Compared to the rest of the study area, restoration areas
 had higher chick survival, and lower nest survival and after second year
 site fidelity. The result was population growth in restoration areas (λ
 =1.14) similar to the whole study area. In the short term, restoration
 areas seemed to mimic natural Piping Plover habitat. Vegetation removal,
 an important process in renewing natural Piping Plover habitat, likely
 will be necessary to maintain habitat suitability. Efforts to increase
 immigration of new breeding adults into the system, and to improve
 reproductive output, primarily by habitat creation or maintenance, are
 likely to have the greatest local effect on population growth.
description: We studied Piping Plovers on a 27-km stretch of Fire Island and
 Westhampton Island, during April to August, 2013–2018. We searched for
 nests by surveying areas while closely watching the ground and by
 observing adult Piping Plover behavior. When a nest was found, we
 collected the location using a Garmin (Garmin International, Olathe, KS,
 USA) or Trimble GPS unit (Trimble Inc., Sunnyvale, CA, USA). If a nest was
 found with fewer than four eggs, we backdated to an estimated initiation
 date assuming 1.5 days to lay each egg (Wilcox 1959, Haig and Oring
 1988b). If a nest was found with four eggs or it did not increase to four
 eggs after four days, we floated eggs to estimate the initiation date
 (Westerskov 1950). We monitored all nests every one to three days until
 they hatched or failed and classed nests that hatched ≥ one chick
 “successful.” Prior to 2013, all individuals in the
 study were unmarked. During each year, we trapped unbanded adults on nests
 using walk-in drop traps (Wilcox 1959) and banded adults using either a
 uniquely coded, field-readable UV-stable Darvic flag (Roche et al. 2014)
 or a unique combination of four color bands on the tibiotarsus (2013
 only). We surveyed for adult Piping Plovers beginning in the spring of
 2013–2018 (range: April 1–May 14), concluding in the late summer of each
 year (range: August 23–September 26). We surveyed all of the study area,
 including the restoration areas, every two to three days using linear
 transects approximately 100–300 m apart. We resighted marked birds using
 20–60x spotting scopes. We associated adult Piping Plovers with a nest
 either by confirming incubation of banded birds using a spotting scope or
 by catching the adult on the nest.<b> </b>
 We banded all chicks as soon as possible after hatch (age range:
 0–13 days), following the same banding scheme as adults. We conducted
 brood surveys for each brood every one to three days until chicks reached
 30 days old. We considered a bird fledged at 25 days post-hatch for
 consistency with past Piping Plover studies (Hunt et al. 2013, Catlin et
 al. 2015). We also collected auxiliary resightings of banded Piping
 Plovers outside of our study area but within the Atlantic Coast breeding
 range (North Carolina to Atlantic Canada; Catlin et al. 2015).
 The included datasets were all used in an integrated population
 model to assess demographic processes in response to hurricane
 created-habitat (2013–2018) and the creation of restoration areas
 (2015–2018).
description: The datasets included are included as used in the referenced
 manuscript. Relevant datasets (nest success, chick survival, and adult
 survival/fidelity) includes restoration area specific covariates. The
 following includes descriptions of each dataset. No geographic reference
 beyond what is mentioned in the article is included in the datasets, just
 the demographic input files to replicate the study. 
 <strong>pipl_caphist_2013_2018.csv</strong> includes
 the capture history for the Barker survival model used to estimate piping
 plover survival and fidelity. Occasion1:Occasion 6 indicates the year
 specific (2013-2018) status of the capture history as follows. 1 -
 individual was captured that year as a chick. 2 - individual was either
 captured or confirmed as a breeder that year and also seen nonbreeding
 that year. 3 - individual seen in a given year as a breeding adult but not
 seen as a nonbreeder. 4 - individual was only seen as a nonbreeder. 5 -
 individual not seen. NA - any years prior to entry into the dataset.
 Restor13-Restor 18 is a year specific indicator variable which indicates
 whether an individual was a chick in a restoration area (would correspond
 with a 1 as the occasion state), or whether an adult nested in a
 restoration area. 
 <strong>pipl_maxegg_2013_2018.csv</strong> is a
 data.frame that includes each nest that was used in the maximum clutch
 size calcualtion, and includes the year that the nest was monitored, and
 how many eggs it had when complete. 
 <strong>pipl_nestsurv_logexdata_2013_2018.csv </strong>is a data.frame that was used for the logistic exposure nest survival model. Nest indicates which specific nest it was, interval is the time between nest checks, succ was whether or not the nest survived that interval (1 = yes, 0 = no), restoration was an indicator variable as to whether that nest was in a restoration area, and year was the year in which that nest was monitored.  <strong>pipl_paircounts_2013_2018.csv</strong> is a dataframe which can be used to create vectors for both the whole study area and the restoration area models. Pairs is the number of pairs in each year, pairs_r is the number of pairs in the restoreation area in each year, and pairs_nr is the number of pairs outside of the restoration areas in each year.  <strong>pipl_youngsurv_caphist_2013_2018.csv</strong> is a dataframe which can be used for the young survival model. Each nest has a row, Occasion 1 - Occasion 5 is the number of chicks detected from that brood in 5-day increments. Year is the year that brood was monitored (2013-2018) and restoration indicates whether that brood was in in a restoration area or outside of the restoration areas (1 = restoration area, 0 = rest of study area).