cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13534910.v1
title: Additional file 7 of The Phlebotomus papatasi systemic transcriptional response to trypanosomatid-contaminated blood does not differ from the non-infected blood meal

description: Additional file 7: Table S5. Transcripts significantly differentially regulated between 4 day and 9 days post blood meal (blood-only) in P. papatasi.
DOI: 10.6084/m9.figshare.13534913
title: Additional file 8 of The Phlebotomus papatasi systemic transcriptional response to trypanosomatid-contaminated blood does not differ from the non-infected blood meal

description: Additional file 8: Table S6. Transcripts of interest which are differentially regulated between 1 day and 4 days post blood meal (blood-only) in P. papatasi. This is a streamlined version of Additional file 6: Table S4 showing transcripts of interest discussed in the text.
DOI: 10.6084/m9.figshare.13534913.v1
title: Additional file 8 of The Phlebotomus papatasi systemic transcriptional response to trypanosomatid-contaminated blood does not differ from the non-infected blood meal

description: Additional file 8: Table S6. Transcripts of interest which are differentially regulated between 1 day and 4 days post blood meal (blood-only) in P. papatasi. This is a streamlined version of Additional file 6: Table S4 showing transcripts of interest discussed in the text.
DOI: 10.6084/m9.figshare.13534916
title: Additional file 9 of The Phlebotomus papatasi systemic transcriptional response to trypanosomatid-contaminated blood does not differ from the non-infected blood meal

description: Additional file 9: Table S7. Transcripts of interest which are differentially regulated between 4 days and 9 days post blood meal (blood-only) in P. papatasi. This is a streamlined version of Additional file 6: Table S4 showing transcripts of interest discussed in the text.
DOI: 10.6084/m9.figshare.13534916.v1
title: Additional file 9 of The Phlebotomus papatasi systemic transcriptional response to trypanosomatid-contaminated blood does not differ from the non-infected blood meal

description: Additional file 9: Table S7. Transcripts of interest which are differentially regulated between 4 days and 9 days post blood meal (blood-only) in P. papatasi. This is a streamlined version of Additional file 6: Table S4 showing transcripts of interest discussed in the text.
DOI: 10.6084/m9.figshare.13551087
title: Additional file 3 of Trypanosoma cruzi infection in Triatoma infestans and high levels of human–vector contact across a rural-to-urban gradient in the Argentine Chaco

description: Additional file 3: Table S3. Dataset including infection status, bloodmeal source identification, environmental and demographic variables, Avia Terai, Chaco, 2015–2016.
DOI: 10.6084/m9.figshare.13551087.v1
title: Additional file 3 of Trypanosoma cruzi infection in Triatoma infestans and high levels of human–vector contact across a rural-to-urban gradient in the Argentine Chaco

description: Additional file 3: Table S3. Dataset including infection status, bloodmeal source identification, environmental and demographic variables, Avia Terai, Chaco, 2015–2016.
DOI: 10.6084/m9.figshare.13543763.v1
title: Additional file 1 of New World screwworm (Cochliomyia hominivorax) myiasis in feral swine of Uruguay: One Health and transboundary disease implications

description: Additional file 1: Dataset S1. Data for all feral swine collected in the study. Data contains: date of sample, sex and size of captured feral swine, coordinates of capture, and if the swine had myiasis.
DOI: 10.6084/m9.figshare.13543769.v1
title: Additional file 3 of New World screwworm (Cochliomyia hominivorax) myiasis in feral swine of Uruguay: One Health and transboundary disease implications

description: Additional file 3: Dataset S3. Data for all myiasis cases. GPS coordinates, location of sample, body location of myiasis, reported probable cause of myiasis.
DOI: 10.6084/m9.figshare.13543763
title: Additional file 1 of New World screwworm (Cochliomyia hominivorax) myiasis in feral swine of Uruguay: One Health and transboundary disease implications

description: Additional file 1: Dataset S1. Data for all feral swine collected in the study. Data contains: date of sample, sex and size of captured feral swine, coordinates of capture, and if the swine had myiasis.
DOI: 10.6084/m9.figshare.13543766
title: Additional file 2 of New World screwworm (Cochliomyia hominivorax) myiasis in feral swine of Uruguay: One Health and transboundary disease implications

description: Additional file 2: Dataset S2. All weather data used for correlations with temperature and precipitation.
DOI: 10.6084/m9.figshare.13543766.v1
title: Additional file 2 of New World screwworm (Cochliomyia hominivorax) myiasis in feral swine of Uruguay: One Health and transboundary disease implications

description: Additional file 2: Dataset S2. All weather data used for correlations with temperature and precipitation.
DOI: 10.6084/m9.figshare.13543769
title: Additional file 3 of New World screwworm (Cochliomyia hominivorax) myiasis in feral swine of Uruguay: One Health and transboundary disease implications

description: Additional file 3: Dataset S3. Data for all myiasis cases. GPS coordinates, location of sample, body location of myiasis, reported probable cause of myiasis.
DOI: 10.6084/m9.figshare.16735827
title: Additional file 1 of Molecular profiling of advanced malignancies guides first-line N-of-1 treatments in the I-PREDICT treatment-naïve study

description: Additional file 1: Table S1. Molecular results and drug matches for treated patients only. Table S2. Raw data for 145 patients.
DOI: 10.6084/m9.figshare.16735827.v1
title: Additional file 1 of Molecular profiling of advanced malignancies guides first-line N-of-1 treatments in the I-PREDICT treatment-naïve study

description: Additional file 1: Table S1. Molecular results and drug matches for treated patients only. Table S2. Raw data for 145 patients.
DOI: 10.6084/m9.figshare.13566141
title: Additional file 1 of Trematode diversity reflecting the community structure of Danish freshwater systems: molecular clues

description: Additional file 1: Fig. S1 Phylogenetic analysis of ITS sequences. Own sequences are shown in red.
DOI: 10.6084/m9.figshare.13310518
title: Additional file 1 of Comparative transcriptomic analysis of antimony resistant and susceptible Leishmania infantum lines

description: Additional file 1: Table S1. Enriched genes for biological process category with Gene Ontology assigned terms.
DOI: 10.6084/m9.figshare.13310518.v1
title: Additional file 1 of Comparative transcriptomic analysis of antimony resistant and susceptible Leishmania infantum lines

description: Additional file 1: Table S1. Enriched genes for biological process category with Gene Ontology assigned terms.
DOI: 10.6084/m9.figshare.13310521
title: Additional file 2 of Comparative transcriptomic analysis of antimony resistant and susceptible Leishmania infantum lines

description: Additional file 2: Table S2. Not enriched genes for the biological process category with Gene Ontology assigned terms.
DOI: 10.6084/m9.figshare.13566141.v1
title: Additional file 1 of Trematode diversity reflecting the community structure of Danish freshwater systems: molecular clues

description: Additional file 1: Fig. S1 Phylogenetic analysis of ITS sequences. Own sequences are shown in red.
DOI: 10.6084/m9.figshare.13310521.v1
title: Additional file 2 of Comparative transcriptomic analysis of antimony resistant and susceptible Leishmania infantum lines

description: Additional file 2: Table S2. Not enriched genes for the biological process category with Gene Ontology assigned terms.
DOI: 10.6084/m9.figshare.13310527.v1
title: Additional file 4 of Comparative transcriptomic analysis of antimony resistant and susceptible Leishmania infantum lines

description: Additional file 4: Table S3. Hypothetical proteins: enriched for the biological process (BP) category, not enriched for BP with and without Gene Ontology assigned terms.
DOI: 10.6084/m9.figshare.13310524
title: Additional file 3 of Comparative transcriptomic analysis of antimony resistant and susceptible Leishmania infantum lines

description: Additional file 3: Figure S1. Not enriched genes for the biological process category without Gene Ontology assigned terms.
DOI: 10.6084/m9.figshare.13310524.v1
title: Additional file 3 of Comparative transcriptomic analysis of antimony resistant and susceptible Leishmania infantum lines

description: Additional file 3: Figure S1. Not enriched genes for the biological process category without Gene Ontology assigned terms.
DOI: 10.6084/m9.figshare.13310527
title: Additional file 4 of Comparative transcriptomic analysis of antimony resistant and susceptible Leishmania infantum lines

description: Additional file 4: Table S3. Hypothetical proteins: enriched for the biological process (BP) category, not enriched for BP with and without Gene Ontology assigned terms.
DOI: 10.6084/m9.figshare.16735315
title: Al2O3_e135-e180.7z

description: Abundance and distribution of oxide abundances and Mg# values generated from KAGUYA multiband imager (MI) spectra<br>
DOI: 10.6084/m9.figshare.16735315.v1
title: Al2O3_e135-e180.7z

description: Abundance and distribution of oxide abundances and Mg# values generated from KAGUYA multiband imager (MI) spectra<br>
DOI: 10.6084/m9.figshare.16736638
title: Therapeutic potential and ethnopharmacology of dominant mangroves of Bhitarkanika National Park, Odisha, India.

description: <b>Purpose </b>Bhitarkanika National Park is the second largest contiguous mangrove with one of the most diverse mangrove habitations forest of India. Approximately 0.15 million mangrove depending population are found residing in and around the National Park. However, the ethnopharmacological practices are comparatively lower than the other mangrove regions of India and Southeast Asia. The present review is aimed to congregate information on the therapeutic potential and ethnopharmacology of nine dominant mangrove species of the National Park. <b>Materials and methods </b>Information are curated from different scientific electronic databases and also from various published books and literatures from libraries. <b>Results </b>An array of phytocompounds of varied chemical classes has already been characterized from these mangroves throughout the globe targeting a multitude of diseases. But, only a few local mangrove species were evaluated for their biological activities related to their primary or secondary metabolites and any novel phytocompound is yet to be reported from the National park. The therapeutic potential of different plant part extracts and the isolated phytocompounds are summerized alongwith the ethnopharmacological information. <b>Conclusion and future perspectives </b>The present review will generate awareness and promote uses of folklore medicine as a tool to strengthen community health among the mangrove dwellers around Bhitarkanika National Park, which is one of the most under-studied mangrove region of South-east Asia. There are also astounding scopes for following future researches on the mangroves of Bhitarkanika as well as of India, like 1. chemotyping and genotyping of phytocompounds in mangrove plants, 2. characterization of phytocompounds from mangrove endophytes, 3. understanding the epigenetic variation in magroves as an impact of agroclimatic variations, environmental fluctuations with reference to salinity, submergence and ambient oxygen stresses, and 4. possibility of mangrove phytocompounds as epi drugs.
DOI: 10.15151/esrf-es-514135118
title: BAG for the Structural Biology Groups in Madrid

description: This proposal is a collaborative effort of the Structural Biology Groups of Madrid with the objective to form a strong core of scientist devoted to this area of research in Spain. It is composed of 18 groups distributed in 4 Institutes.
DOI: 10.15151/esrf-es-514141764
title: Stockholm BAG

description: The Stockholm BAG is a constellation of seven research groups, whose PIs are affiliated to Karolinska Institutet (Adnane Achour, Jesper Haeggström, Luca Jovine and Robert Schnell) or Stockholm University (David Drew, Martin Hogböm, Pål Stenmark). Together, these groups are responsible for the large majority of the macromolecular crystallography research taking place in the Swedish capital. The scientific interests of the BAG encompass a broad variety of topics that include structural immunology, bacterial adhesion and toxicity, membrane proteins involved in inflammation and transport, fertilization, and enzymatic catalysis relevant to antibiotic production, green chemistry and cancer.
DOI: 10.15151/esrf-es-514142695
title: FInnish National Protein Crystallography Consortium

description: The Finnish BAG encompasses 25 groups active in crystallography in Finland. The projects vary widely and include membrane proteins such as membrane pyrophosphatases, and various protein complexes and receptors (growth factor receptors, integrins), signaling proteins such as kinases, other proteins involved in disease and antibiotics development (neuronal adhesion and myelin proteins, PP2A, ADP-ribosylation and biocatalytic enzymes) and several pathogen proteins (e.g. viral proteins) and various enzyme targets and e.g. studies on phytochrome photoreceptors and complexes involved in actin and cytoskeleton dynamics and regulation. Overall the BAG serves the national needs for highly variable projects, with different biological and biotechnological applications. Several project will benefit from microfocus beam lines and tunable wavelength options for phasing, others benefit from quick robust screening by MASSIF. Biology lab is needed for SAXS experiments.
DOI: 10.15151/esrf-es-566035211
title: Austrian Crystallographic Diffraction Consortium

description: This proposed Austrian Crystallographic Diffraction Consortium (ACDC) BAG is to support various macromolecular structural biology groups across Austria (totally 15 research groups at 8 institutions in 5 cities). We employ mainly the technique of X-ray crystallography to characterize macromolecular biological complexes. Approval of this BAG will be absolutely essential for researchers in all these groups to carry out their structural studies on various health-related subjects, which are targeted at characterizing large molecular assemblies or proteins currently under-represented in the PDB, including membrane proteins. Corresponding high-resolution diffraction data are only obtainable through the use of synchrotron radiation sources. Thus regular synchrotron access is highly desirable to maintain a competitive advantage in our individual research fields.
DOI: 10.15151/esrf-es-564119447
title: BCDI on NiFe particles + ptychography on 4 CRLs

description: BCDI measurement on NiFe particles at 6.72keV 4 CRLs stack profile characterization using ptychography in transmission geometry.
DOI: 10.15151/esrf-es-567259996
title: Nonequilibrium fluctuations in sheared colloidal suspensions

description: Resubmission of IH-SC-1664
DOI: 10.15151/esrf-es-527924670
title: Deciphering the molecular details of sialic acids metabolic pathways in live cells using click chemistry combined with X-ray fluorescence an

description: The main objective of the project is to obtain organelle level 2D/3D quantitative information on a targeted glycosylation pathway using new strategy based on bioorthogonal metal-based chemical reporter using metabolic oligosaccharide engineering, demonstrating the importance of combined X-ray fluorescence and X-ray phase contrast imaging to help deciphering the molecular details of oligosaccharides synthesis and biological behavior.
DOI: 10.15151/esrf-es-516093481
title: TRACKING ATP-DEPENDENT PROTEIN DYNAMICS

description: Adenosine triphosphate (ATP) drives many critical cellular processes. We will use laser-induced release from a caged, inactive form of ATP followed by short X-ray pulses at the dedicated time-resolved X-ray solution scattering (TR-XSS) beamline ID09 at ESRF-EBS to study protein conformational change in real time. We aim to identify fast-forming ATP-binding states in both bacterial and eukaryotic ATP-driven Ca2+ transport, and to monitor how the lipidic environment affect functional structural rearrangements. We will use the same pump-and-probe methodology to track catalysis of nucleotide interconversion, which is central to cellular hemostasis. Here, we aim to determine kinetics and structural dynamics of fast-forming intermediates associated with ATP binding. The results will provide better understanding of lipid-induced membrane transport regulation, cooperative protein dynamics, and significantly increase the number of protein targets for similar time-resolved X-ray studies.
DOI: 10.15151/esrf-es-514133707
title: Unravelling the role of alloys in Ni-Fe/SiO2 and Ni-Cu/SiO2 CO2 hydrogenation catalysts by operando XAS

description: Ni-Fe/SiO2 and Ni-Cu/SiO2 catalysts are promising candidates for CO2 hydrogenation towards value-added products. We aim to understand the influence of Fe and Cu on electronic and structural properties of Ni, and further the influence of varying metal ratio. Operando XAS will yield key information on metal alloy formation and a fundamental understanding of synergistical effects in bimetallic catalysts and their influence on catalytic performance. Combining these results will pave the way for deducing a general guideline to rationally design bimetallic catalysts for CO2 valorization .
DOI: 10.15151/esrf-es-531665001
title: Ti, V and Cr valences in olivines of CV3 chondrites: insights into chondrules formation

description: Chondrules (mm-size igneous spherules made of silicates) are the major components of primitive meteorites. Their origin is still debated: did they derive from planets or did they directly form in a mysterious nebular environment? Hence, deciphering their condition of formation is crucial for understanding the Solar system’s evolution. Recently, some clues based on chemical and isotopic measurements have promoted nebular models. Although we lack data on their formation’s environments, a promising approach would be to measure the oxygen fugacity (fO2) recorded during their formation (fO2 is dependent on the chemical environment). Reducing conditions are typical of nebular environments (log fO2~IW-7, IW being the Fe-FeO redox buffer) while planetary impacts generate oxidizing conditions (log fO2&gt;IW). Here we propose to determine the valences of Ti, V and Cr in olivine grains contained in CV3 chondrites to estimate fO2 values and determine the environment of chondrules’ formation.
DOI: 10.15151/esrf-es-514137917
title: The nature of the collapsed structural transition in valence-fluctuating EuT2P2 (T = Fe, Ru, Co)

description: The aim of the proposed experiment is to elucidate the nature of the structural transition into the collapsed tetragonal phase of EuT2P2 (T = Fe, Ru, Co) under pressure at 10, 50 and 300 K. This proposal is motivated by the possibility of a strong coupling of electronic and structural degrees of freedom around the valence transition of Eu-based pnictides. If the valence transition of europium is intertwined with the structural transition into the collapsed tetragonal phase, this would open the way to a new materials class with intriguing coupled electronic and elastic phenomena. To this end, we will study high-quality crystals and follow the large change (~20%) of the c/a ratio of the lattice parameters as function of pressure up to 10 GPa.
DOI: 10.15151/esrf-es-514144081
title: Tuning the charge-transfer energy regime and emergent magnetic order in rare-earth nickelate / titanate superlattices

description: Previous studies have suggested that a large difference in electron affinity can cause interfacial charge transfer from Ti to Ni in LaTiO3/LaNiO3 heterostructures, leading to large orbital polarization, crossover of charge-transfer (CT) energy regimes, and possible magnetic orders not found in bare LaNiO3. Particularly, a preliminary RIXS measurement (resolution: 100 meV) has revealed a possible existence of low-energy magnon excitations at the Ni L2 edge. Here, we propose a systematic study of nLaTiO3/mLaNiO3 superlattices with varying n/m ratios using high-resolution RIXS (resolution: 35 meV) at Ni L2 edge, to resolve these low-energy features and observe their evolution as a function of confinement and CT energy regimes. The results will identify the nature of the possible magnetic order, and its existence would indicate an emergent transformation of LaNiO3 from a paramagnetic metal into a magnetic insulator.
DOI: 10.15151/esrf-es-526908457
title: Atomic dynamics during radiation induced solid-solid transitions

description: We propose to probe the beam induced dynamics in a α-quartz single crystal by means of X-ray photo correlation spectroscopy (XPCS). We expect an amorphization process analogue to that measured in the neutron irradiated crystalline samples. Furthermore, we will monitor the structure of the irradiated sample using an additional detector mounted near the sample stage. The experiment would provide a complete structural and dynamical analysis of the solid-solid transition pumped by the ionizing beam.
DOI: 10.5281/zenodo.5548913
title: Visible and Near-Infrared Reflectance Spectra of Igneous Rocks and Their Powders

description: Spectral reflectance data for "Visible and Near-Infrared Reflectance Spectra of Igneous Rocks and Their Powders".
DOI: 10.5281/zenodo.5548912
title: Visible and Near-Infrared Reflectance Spectra of Igneous Rocks and Their Powders

description: Spectral reflectance data for "Visible and Near-Infrared Reflectance Spectra of Igneous Rocks and Their Powders".
DOI: 10.15468/hdsx6f
title: Morphological and molecular evidence for the recognition of Caloglossa fonticola sp. nov. (Delesseriaceae, Rhodophyta) from an underground spring in Guangxi, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Fang, Kun-Peng, Nan, Fang-Ru, Feng, Jia, Liu, Qi, Liu, Xu-Dong, Xie, Shu-Lian (2021): Morphological and molecular evidence for the recognition of Caloglossa fonticola sp. nov. (Delesseriaceae, Rhodophyta) from an underground spring in Guangxi, China. Phytotaxa 522 (1): 15-26, DOI: 10.11646/phytotaxa.522.1.2, URL: http://dx.doi.org/10.11646/phytotaxa.522.1.2
DOI: 10.15468/g7cqj3
title: Description, distribution and ecology of endemic Tasmanian quillwort, Isoetes jarmaniae, sp. nov. (Isoetaceae; Lycopodiopsida)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Brunton, Daniel F., Garrett, Michael, Sokoloff, Paul C., Kantvilas, Gintaras (2021): Description, distribution and ecology of endemic Tasmanian quillwort, Isoetes jarmaniae, sp. nov. (Isoetaceae; Lycopodiopsida). Phytotaxa 522 (1): 27-37, DOI: 10.11646/phytotaxa.522.1.3, URL: http://dx.doi.org/10.11646/phytotaxa.522.1.3
DOI: 10.5281/zenodo.5549035
title: Wikidata Dump subclass of food

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 2829, <b>statement count</b>: 21710, <b>triple count</b>: 255356
DOI: 10.5281/zenodo.5549034
title: Wikidata Dump subclass of food

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 2829, <b>statement count</b>: 21710, <b>triple count</b>: 255356
DOI: 10.5281/zenodo.5549037
title: Wikidata Dump P31-Q154 testing

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 98, <b>statement count</b>: 779, <b>triple count</b>: 7840
DOI: 10.5281/zenodo.5549036
title: Wikidata Dump P31-Q154 testing

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 98, <b>statement count</b>: 779, <b>triple count</b>: 7840