cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.cwvtcz
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helophilus sapporensis Matsumura, 1911",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0212039-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nvufym
title: Occurrence Download

description: A dataset containing 195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Astilbe japonica (C.Morren & Decne.) A.Gray",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 195 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0193572-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxyt9x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agave tequilana F.A.C.Weber",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0193608-220831081235567/datasets/export for details.
DOI: 10.15468/dl.d4zan5
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is MEX.26_1",
 "TaxonKey is Felidae"
 ]
}

 The dataset includes 227 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0212041-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.byypwe
title: Occurrence Download

description: A dataset listing the 3488560 species recorded in GBIF matching the query:
{ }

 The dataset's 3488560 records were derived from 53780 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0175907-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kp2rxd
title: Occurrence Download

description: A dataset containing 124409 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anas fulvigula Ridgway, 1874",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Year is greater than or equal to 1810",
 "Year is less than or equal to 2019",
 "Month is greater than or equal to April",
 "Month is less than or equal to September",
 "EventDate is not null",
 "Country is United States of America",
 "Geometry POLYGON((-63 22, -63 51, -126 51, -126 22, -63 22))"
 ]
}

 The dataset includes 124409 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014064-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8yyccr
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prosopis juliflora",
 "Country is Burkina Faso",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041833-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8w4d3c
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prosopis juliflora",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 40 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041830-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5muzys
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prosopis juliflora",
 "Country is Botswana",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041832-250717081556266/datasets/export for details.
DOI: 10.15468/dl.2tgrq5
title: Occurrence Download

description: A dataset containing 462262 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Salix cinerea"
 ]
}

 The dataset includes 462262 records from 1609 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041726-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s87hr9
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alkekengi officinarum",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041835-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6rnhvk
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Oreoleuciscus potanini)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 22 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041834-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.acdhfn
title: Occurrence Download

description: A dataset containing 2479 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Antigonia capros"
 ]
}

 The dataset includes 2479 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041836-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30323599
title: Figure S8

description: Raw data and code for Figure S8 of Cdkn1a expression in purebred primary fibroblasts from <i>M. m. musculus</i> (PWK)<b> </b>and <i>M. spretus (</i>STF).We obtained normalized RNA-sequencing data from individual replicates of <i>M. m. musculus</i> (PWK) and <i>M. spretus</i> (STF) primary fibroblasts under untreated (control) and irradiation-treated conditions from Kang <i>et al.</i>, 2023 (“A natural variation-based screen in mouse cells reveals USF2 as a regulator of the DNA damage response and cellular senescence”). The dataset is available in the NCBI Gene Expression Omnibus (GEO) under accession number <b>GSE201217</b>.
DOI: 10.6084/m9.figshare.30323599.v1
title: Figure S8

description: Raw data and code for Figure S8 of Cdkn1a expression in purebred primary fibroblasts from <i>M. m. musculus</i> (PWK)<b> </b>and <i>M. spretus (</i>STF).We obtained normalized RNA-sequencing data from individual replicates of <i>M. m. musculus</i> (PWK) and <i>M. spretus</i> (STF) primary fibroblasts under untreated (control) and irradiation-treated conditions from Kang <i>et al.</i>, 2023 (“A natural variation-based screen in mouse cells reveals USF2 as a regulator of the DNA damage response and cellular senescence”). The dataset is available in the NCBI Gene Expression Omnibus (GEO) under accession number <b>GSE201217</b>.
DOI: 10.6084/m9.figshare.30323503
title: Figure S6

description: Raw data and code for Figure S6 of Glb1 expression in purebred and F1 hybrid primary fibroblasts from <i>M. m. musculus</i> (PWK)<b> </b>and <i>M. spretus (</i>STF).We obtained normalized RNA-sequencing data from individual replicates of <i>M. m. musculus</i> (PWK) and <i>M. spretus</i> (STF) primary fibroblasts under untreated (control) and irradiation-treated conditions from Kang <i>et al.</i>, 2023 (“A natural variation-based screen in mouse cells reveals USF2 as a regulator of the DNA damage response and cellular senescence”). The dataset is available in the NCBI Gene Expression Omnibus (GEO) under accession number <b>GSE201217</b>.<br>
DOI: 10.6084/m9.figshare.30323503.v1
title: Figure S6

description: Raw data and code for Figure S6 of Glb1 expression in purebred and F1 hybrid primary fibroblasts from <i>M. m. musculus</i> (PWK)<b> </b>and <i>M. spretus (</i>STF).We obtained normalized RNA-sequencing data from individual replicates of <i>M. m. musculus</i> (PWK) and <i>M. spretus</i> (STF) primary fibroblasts under untreated (control) and irradiation-treated conditions from Kang <i>et al.</i>, 2023 (“A natural variation-based screen in mouse cells reveals USF2 as a regulator of the DNA damage response and cellular senescence”). The dataset is available in the NCBI Gene Expression Omnibus (GEO) under accession number <b>GSE201217</b>.<br>
DOI: 10.15468/dl.757xpu
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phytolacca heterotepala",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 159 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011582-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17488187
title: Data file for: Tectonic Framework of the Arenópolis and Anicuns-Itaberaí Segments of the Goiás Magmatic Arc based on 3D Magnetotelluric Inversion

description: The magnetotelluric data were acquired with the aim of better understanding the crustal electrical structure of the Goiás Magmatic Arc, a Neoproterozoic arc located in the Brasília Belt, central Brazil. This study was conducted jointly by the University of Brasília, the Geological Survey of Brazil, and the Observatório Nacional.

The data were processed using the EMTF scripts (Egbert, 1997; https://doi.org/10.1111/j.1365-246X.1997.tb05663.x) and compiled for ModEM inversion in MTpy (Kirkby et al., 2019; https://doi.org/10.21105/joss.01358; Krieger & Peacock, 2014; https://doi.org/10.1016/j.cageo.2014.07.013).
DOI: 10.15468/dl.w94tcr
title: Occurrence Download

description: A dataset containing 286 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Prioria copaifera [GBIF Backbone Taxonomy])",
 {
 "or" : [
 "Year is 2015",
 "Year is 2016",
 "Year is 2017",
 "Year is 2018",
 "Year is 2019",
 "Year is 2020",
 "Year is 2021",
 "Year is 2022",
 "Year is 2023",
 "Year is 2024",
 "Year is 2025"
 ]
 },
 "PublishingOrg is one of (e1050db2-9faf-4d72-b860-295debaf9d2a, 00a915e7-b4e2-4795-bcbf-45e4dda0e927, 007a7e84-3793-4a7c-aa29-8987e27f4d1f, 1a4f4e64-eb3d-42c3-a359-1be3869b3a20)"
 ]
 }
 ]
}

 The dataset includes 286 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008900-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6s9pah
title: Occurrence Download

description: A dataset containing 2619 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Flora del Valle de Tehuacán-Cuicatlán: III fase"
 ]
}

 The dataset includes 2619 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008901-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f9s84a
title: Occurrence Download

description: A dataset containing 323 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chiococca motleyana"
 ]
}

 The dataset includes 323 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008902-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17488498
title: Deciphering the cutaneous melanoma transcriptome and its genetic underpinnings - PhD thesis supplementary tables
DOI: 10.5281/zenodo.17488499
title: Deciphering the cutaneous melanoma transcriptome and its genetic underpinnings - PhD thesis supplementary tables
DOI: 10.5281/zenodo.15675231
title: Mississippi High-Resolution Land Cover Dataset

description: This dataset contains 1-meter resolution land cover data for the state of Mississippi, USA for the years 2016 and 2023. This dataset is derived from USDA National Agriculture Imagery Program (NAIP) imagery for the corresponding years, and was created using a specialized deep learning model trained on manually annotated imagery. This dataset is provided "as-is" without any warranty of any kind, either expressed or implied. Furthermore, the authors provide no guarantee of suitability or fitness for any particular purpose.



 

Data Description





The dataset is provided in GeoTIFF format, and includes both state-wide and county-level products for convenience. All data is projected in Mississippi Transverse Mercator coordinate system, and are stored in 8-bit unsigned integer format.  The land cover classes in the dataset are described in the following table:

 








Pixel Value
Land Cover Class
Description


0
No Data
N/A


1
Open Water
Water bodies such as lakes, rivers, ponds, streams, pools, etc.


2
Impervious Structures
Man-made structures that have elevated surfaces, such as buildings, docks, large vehicles, etc.


3
Impervious Surfaces
Man-made surfaces that are not elevated, such as roads, parking lots, sidewalks, etc.


4
Barren Land
Areas absent of vegetation, structures, or water, such as bare soil, sand, gravel, rock, etc.


5
Tree Canopy/Woody Vegetation
Areas with visible tree canopy or moderate-to-large woody shrubs with substantial density and/or structure.


6
Herbaceous/Low Vegetation
Low-growing vegetation such as grasses, aquatic plants, pastures, and small shrubs with low density and/or sparse structure.


7
Cultivated Crops
Agricultural fields with visible crop growth identifiable by high near-infrared reflectance and row crop patterns.


8
Unclassified
Regions obscured by shadows or other image artifacts that prevent reliable classification.






 

The dataset used to train the model can be accessed here. If you have any questions or need assistance with the dataset, please contact Dakota Hester at dh2306@msstate.edu.

 

Acknowledgements



This dataset was created with support from the Mississippi Agricultural and Forestry Experiment Station under a strategic research initiative in an effort to build machine learning systems that enhance stakeholder understanding of the distribution of natural resources in the state of Mississippi. This dataset is provided under the Creative Commons Attribution 4.0 International License, which allows for free use, distribution, and modification of the dataset with proper attribution to the authors. When using or citing this dataset, please reference the following citation:

 





@misc{hester2025ms_hires_lc,

  author = {Dakota Hester and Vitor Souza Martins},

  title = {Mississippi Land Cover Training Dataset},

  year = {2025},

  publisher = {Mississippi State University},

  doi = {10.5281/zenodo.16762344},

}
DOI: 10.5281/zenodo.16762344
title: Mississippi High-Resolution Land Cover Dataset

description: This dataset contains 1-meter resolution land cover data for the state of Mississippi, USA for the years 2016 and 2023. This dataset is derived from USDA National Agriculture Imagery Program (NAIP) imagery for the corresponding years, and was created using a specialized deep learning model trained on manually annotated imagery. This dataset is provided "as-is" without any warranty of any kind, either expressed or implied. Furthermore, the authors provide no guarantee of suitability or fitness for any particular purpose.



 

Data Description





The dataset is provided in GeoTIFF format, and includes both state-wide and county-level products for convenience. All data is projected in Mississippi Transverse Mercator coordinate system, and are stored in 8-bit unsigned integer format.  The land cover classes in the dataset are described in the following table:

 








Pixel Value
Land Cover Class
Description


0
No Data
N/A


1
Open Water
Water bodies such as lakes, rivers, ponds, streams, pools, etc.


2
Impervious Structures
Man-made structures that have elevated surfaces, such as buildings, docks, large vehicles, etc.


3
Impervious Surfaces
Man-made surfaces that are not elevated, such as roads, parking lots, sidewalks, etc.


4
Barren Land
Areas absent of vegetation, structures, or water, such as bare soil, sand, gravel, rock, etc.


5
Tree Canopy/Woody Vegetation
Areas with visible tree canopy or moderate-to-large woody shrubs with substantial density and/or structure.


6
Herbaceous/Low Vegetation
Low-growing vegetation such as grasses, aquatic plants, pastures, and small shrubs with low density and/or sparse structure.


7
Cultivated Crops
Agricultural fields with visible crop growth identifiable by high near-infrared reflectance and row crop patterns.


8
Unclassified
Regions obscured by shadows or other image artifacts that prevent reliable classification.






 

The dataset used to train the model can be accessed here. If you have any questions or need assistance with the dataset, please contact Dakota Hester at dh2306@msstate.edu.

 

Acknowledgements



This dataset was created with support from the Mississippi Agricultural and Forestry Experiment Station under a strategic research initiative in an effort to build machine learning systems that enhance stakeholder understanding of the distribution of natural resources in the state of Mississippi. This dataset is provided under the Creative Commons Attribution 4.0 International License, which allows for free use, distribution, and modification of the dataset with proper attribution to the authors. When using or citing this dataset, please reference the following citation:

 





@misc{hester2025ms_hires_lc,

  author = {Dakota Hester and Vitor Souza Martins},

  title = {Mississippi Land Cover Training Dataset},

  year = {2025},

  publisher = {Mississippi State University},

  doi = {10.5281/zenodo.16762344},

}
DOI: 10.5519/qd.atonl1mn
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4 records)
DOI: 10.15468/dl.f2kfux
title: Occurrence Download

description: A dataset containing 13760 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Sialia currucoides"
 ]
}

 The dataset includes 13760 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008905-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17488508
title: Original_data_Duppe_et_al

description: Original data for PNAS USA article
DOI: 10.5281/zenodo.17488509
title: Original_data_Duppe_et_al

description: Original data for PNAS USA article
DOI: 10.15468/dl.d3nr8y
title: Occurrence Download

description: A dataset containing 19904 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is New Zealand",
 "TaxonKey is Eudyptula minor"
 ]
}

 The dataset includes 19904 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008906-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/ace0-1v36
title: Lake Marian geochronologic dataset

description: Raw data for the Lake Marian geochronologic dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/anxj-x593
title: Lake Marian geochemistry dataset

description: Raw data for the Lake Marian geochemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15784/601811
title: Metadata associated with the description of Akarotaxis gouldae n. sp. (Bathydraconidae)

description: This data set includes photographs and metadata from phylogenetic analyses associated with the description of Akarotaxis gouldae n. sp., or the Banded Dragonfish (Bathydraconidae).
DOI: 10.15468/dl.x44z5s
title: Occurrence Download

description: A dataset containing 4575 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "Geometry POLYGON((-102.3786 19.61574,-96.99749 19.61574,-96.99749 23.09534,-102.3786 23.09534,-102.3786 19.61574))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Amaranthaceae"
 ]
}

 The dataset includes 4575 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008907-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgrst3
title: Occurrence Download

description: A dataset containing 284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chloracantha spinosa"
 ]
}

 The dataset includes 284 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008910-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/bcrp-m319
title: Lake Marian charcoal dataset

description: Raw data for the Lake Marian charcoal dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.