cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/36zpwkbny3
title: Validation of surveys DREEM and JHLES - questionnaires made to assess the learning environment of medical schools.

description: Polish Validation of surveys DREEM and JHLES. The objective of this was to translate and adapt the JHLES and DREEM questionnaires to Polish cultural conditions and to validate the Polish version of the tool. The JHLES and DREEM questionnaires were completed twice by students of all years (first year through fifth year) of the faculties of dental medicine at the Medical University of Lublin and the Medical University of Gdańsk. The total surveyed population consisted of 650 students. The study was carried out from April through June 2022.
DOI: 10.17632/3yrc564v9n
title: Number of Visitor arraval by Asean Member States 2012- 2021

description: Number of Visitor arraval by Asean Member States 2012- 2021. Intra and extra ASEAN Vistor arrivals  (000), 2021
DOI: 10.17632/534w4xk9zg
title: Output divergence in fixed exchange rate regimes: Replication package and online appendix

description: Replication package and online appendix for the paper “Output Divergence in Fixed Exchange Rate Regimes” by Yao Chen and Felix Ward. The replication package includes a readme-file, Stata codes, data, and output files required to reproduce all figures presented in the main text and Online Appendix.

The paper presents empirical evidence for the violation of nominal exchange regime neutrality. We find that fixing the exchange rate is associated with real output losses among countries with a high pre-peg inflation rate. In particular, ten years after fixing the exchange rate a country with a +1 percentage point (ppt) pre-peg wage inflation differential has a 2% lower real GDP per capita level and a 1% lower TFP level. The tradable sector is more affected than the non-tradable sector, which accords with the former’s greater exposure to international arbitrage.
DOI: 10.17632/w3n9xp5dnp
title: DNA organization along pachytene chromosome axes and its relationship with crossover frequencies 

description: MLH1- focus map along SC1
The construction of crossover frequency histograms from MLH1 foci in birds and other vertebrates is fully explained in several publications (Pigozzi and Solari 1999; Borodin et al 2008). Briefly, individual SC lengths, centromeric signals, and MLH1 foci were scored using version 3.3 of the MicroMeasure program [53] which records absolute and relative distances on digitized images. To generate the recombination maps of the SC1, we calculated the absolute position of each MLH1 focus by multiplying the relative position of each focus by the average absolute length of the chromosome arm. These data were pooled for each arm and graphed in histogram form. The genetic map length in cM of each interval in this histogram (bin size 0.25 µm) was calculated multiplying the average number of MLH1 foci by 50. To produce the cumulative cM distribution, the average number of MLH1 foci per interval was converted to cM and then added along the SC starting from the tip of the short arm.
Foci on microbivalentes 9-38. The number of foci is the average scored in 138 nuclei.
DOI: 10.26180/22640677.v1
title: Carla Synthetics Dataset

description: This dataset provides Carla synthetic data used in our paper.
DOI: 10.60893/figshare.apl.28569023.v1
title: Supplementary information

description: Detailed fabrication flow
DOI: 10.17632/6rs5mnvktk
title: COVID-19 Dataset

description: COVID-19 dataset including ultrasound images
DOI: 10.17632/6w526j2dsn
title: Effects of an Vitamin D on Neuropsychiatric Manifestations in Long COVID

description: This study aims to evaluate the effectiveness of high-dose vitamin D supplementation in alleviating fatigue, depression, anxiety, sleep problem and cognitive symptoms in patients with long COVID. 

The study is an 8-week, double-blind, randomized, placebo-controlled trial. Intervention is an vitamin D supplementation of 60,000 IU. Clinical outcomes were evaluated using the Chalder Fatigue Scale (CFQ-11), Depression, Anxiety, and Stress Scale-21 Items (DASS-21), Pittsburgh Sleep Quality Index (PSQI), Addenbrooke's Cognitive Examination III (ACE), and Trail Making Test A and B (TMT-A and TMT-B). Additionally, baseline and 8-week measurements of inflammatory markers, including Interleukin 6 (IL-6) and C-reactive protein (CRP), were collected.
DOI: 10.17632/9fnddtjppj
title: Treatment with Wedelolactone reverses AKI caused by Bothrops jararacussu envenomation.

description: Summary: Snakebite-induced acute kidney injury (sAKI) is a severe clinical complication associated with Bothrops envenomation, often leading to renal failure and chronic kidney disease (CKD). This study evaluates the nephroprotective effects of wedelolactone (WEL), a bioactive coumestan derived from Eclipta prostata (EP), in a preclinical model of sAKI. Wistar rats were intramuscularly administered 3.5 mg/kg Bothrops jararacussu (Bj) venom to induce sAKI, followed by treatment with WEL (2, 5, or 10 mg/kg) two hours post-envenomation. At 5 mg/Kg, WEL effectively mitigated renal dysfunction, preserving glomerular filtration rate (GFR), and reducing proteinuria. Histological analysis revealed preserved kidney cytoarchitecture and reduced collagen deposition. Biochemical studies showed that WEL decreased matrix metalloproteinase (MMP) activity and nitrite levels, key contributors to Bj-induced nephrotoxicity, while antioxidant mechanisms were implicated in its protective effects. WEL 2 or 5 mg/Kg did not block Bj-induced muscle damage demonstrating that its molecular mechanism involves the direct impact of the venom in the kidney. Importantly, WEL did not affect kidney function in normal rats. These findings highlight the translational potential of WEL as a complementary therapeutic agent for managing sAKI and reducing the long-term burden of snakebite-related kidney disease.
Experimental protocol: According to Romanelli et al., 2021
Two hours after envenomation, both Ctrl and Bj groups were further subdivided into WEL-treated subgroups, receiving one of the three different WEL doses (IM; 2, 5 or 10 mg/Kg) in the posterior region of the left thigh. This created the following final groups: Ctrl, Ctrl+W2, Ctrl+W5, Ctrl+W10, Bj, Bj+W2, Bj+W5, and Bj+W10. 

Graphics and Tables:
Fig 1 Measure of muscle injury: using a caliper to quantify the extent of the injury. 
Table 2 andTtable 3. Renal function analysis according to Romanelli et al., 2021.
Fig 2: Na+ transporters activity, measured accordin to Pereira-Acácio et al., 2022
Fig 5, 6 and 7. Kidney histomorphometric parameters
Fig 6. Matrix metalloproteinase activity according to Soeiro et al., 2021 
Fig 9. ER Stresse markers by western blot analysis
Fig 10. Oxidative stress, according to Bryan et al., 2007 and Figueiredo-Junior et al., 2022.

Histological Images - Fig 5, 6 and 7

Western blot - Fig 2A and 9

Multiple group comparisons were performed using one-way analysis of variance (ANOVA) followed by Sidak's post hoc test. Statistical analysis were conducted to compare WEL treatment effects in healthy rats (Ctrl vs Ctrl+W2, Ctrl+W5 or Ctrl+W10 groups), the impact of Bj venom exposure (Ctrl vs Bj groups) and the effects of WEL treatment following Bj envenomation (Bj vs Bj+W2, Bj+W5 or Bj+W10 groups). A p value &lt; 0.05 was considered statistically significant. Statistical tests and graphs generation were performed using GraphPad Prism 8.0.2 software (GraphPad Inc., La Jolla, CA).
DOI: 10.6084/m9.figshare.22262545.v6
title: A history reconstructed time series (1992-2011) of annual global NPP-VIIRS-like nighttime light data through a super-resolution U-Net model

description: The dataset is an extend time series of the Version 2 annual NPP-VIIRS nighttime light composites. The dataset contains (1) simulated NPP-VIIRS NTL time series from the DMSP-OLS NTL data (1992-2011) based on a super-resolution U-Net method; and (2) the version 2 annual NPP-VIIRS NTL data (2012-2020), which were obtained from the academic sector at the Colorado School of Mines (https://eogdata.mines.edu/products/vnl/). The pixels of which value less than zero were set to zero. The dataset are 15 arc second grids, spanning -180 to 180 degrees longitude and -65 to 75 degrees latitude. Each zip file contains an NTL image in geotiff format. The filename of each image is "SRUNet_NPP_VIIRS_V2_Like_yyyy", where "yyyy" is the year of the image. The simulated NPP-VIIRS NTL data converted from the DMSP-OLS NTL data in 2012 and 2013 are also uploaded, which named "simulated_NPP_VIIRS_V2_yyyy". Based on the super-resolution deep learning technology, the dataset using DMSP-OLS NTL data and Landsat NDVI to reconstruct the NPP-VIIRS NTL data in the early years (1992-2011). The dataset could be easily updated by downloading the version 2 annual NPP-VIIRS NTL data in later years from the academic sector at the Colorado School of Mines (https://eogdata.mines.edu/products/vnl/). The dataset has good spatial pattern and temporal consistency, and is highly consistent with NPP-VIIRS NTL data. It provide a longer time period compared to existing products. Compared with the annual NPP-VIIRS NTL data in 2012, the dataset shows a good consistency at the pixel, city, province and nation levels with R2 of 0.617, 0.747, 0.874, and 0.964, respectively, while the R2 of the NPP-VIIRS-like NTL product provide by Chen (2020) is 0.512, 0.694, 0.86, and 0.966, respectively.
DOI: 10.6084/m9.figshare.22297813.v1
title: 2740 A4BX6 structures

description: This dataset includes 2740 A4BX6 halide perovskite structures optimized using DMol3
DOI: 10.17632/hvbp5mdtxx
title: Complex Refractive Indices of Ginseng/American Ginseng Tablets

description: The data are the computed THz complex refractive indices of Asian ginseng (AsG) and American ginseng (AmG) tablets, used in " Discrimination between Panax ginseng and Panax quinquefolius with Deep Learning Terahertz Spectroscopy". In total there are 42 tablets, split into 6 groups. 
Upon decompression of "Dataset.rar", there should be 18 csv files in total. The "data_nj.csv" files (j = 1~6) contains the real refractive index data of the tablet samples from j-th group; "data_aj.csv" files (j = 1~6), are the absorption coefficient data of the tablet samples from j-th group. The first columns in these files are the corresponding frequency, in THz, and the remaining 2nd to 8th column are the optical constants. The units of real refractive indices are R.I.U., while those for absorption coefficients are in cm^-1. 
The labels for classification are specified in "label_j.csv" files (j = 1~6), while "1" stands for AsG and "0" for AmG.
DOI: 10.17632/r2g9sfm78s
title: Farmers' Intention to use Intergrated Pest Management for Fall Armworm Control in Ghana

description: The data is Intention of farmers to adopt Integrated Pest Management (IPM) methods to control Fall Armyworm in the Upper East region of Ghana. The research was anchored on the Theory of Planned Behaviour (TPB) by Ajzen (1991). Descriptive Cross-Sectional design was used to survey 266 randomly selected smallholder farmers in eight communities in the Kassena Nankana West Districts and Kassena Nankana Municipal Assembly in the Upper East Region of Ghana. Data was analyzed using Partial Least Squares-Structural Equation Modelling (PLS-SEM) to examine the intention of the farmers to adopt Integrated Pest Management methods for controling Fall Armyworm.
DOI: 10.6084/m9.figshare.14191544.v1
title: YcaO Biosynthetic Gene Clusters in Actinobacteria

description: 1,464 GenBank files retrieved and annotated by RiPPER (https://github.com/streptomyces/ripper; RiPPER originally reported in https://academic.oup.com/nar/article/47/9/4624/5420534) using standalone YcaO proteins from Actinobacteria as the input. This dataset also includes 6 entries from Firmicutes that are reported in the associated manuscript (see reference below). The GenBank files represent putative biosynthetic gene clusters associated with YcaO domain proteins. <br><br>The files are named with the species name and the accession of the input YcaO protein. <br><br>When viewed in the Artemis genome browser (Wellcome Sanger Institute), the input YcaO protein is coloured green and short peptides (&lt;120 amino acids) annotated by RiPPER are colour-coded based on their relative Prodigal score, which indicates the likelihood of being true protein-coding genes. This is a scale from pale red (low score) to magenta (high score). Associated peptide data is deposited with the manuscript.<br>
DOI: 10.6084/m9.figshare.22005461.v1
title: Supplementary material for the article: A big data approach to assess progress towards Sustainable Development Goals for cities of varying sizes

description: This supplementary material provides details of the data and tables supporting the results and findings of the relevant article: “A big data approach to assess progress towards Sustainable Development Goals for cities of varying sizes”. <br> The relevant study aimed to construct a generic indicator system using open-source big data and develop an artificial neural network model to efficiently assess the overall SDG progress (SDG Index) for cities of varying sizes. This supplementary material includes the city-level indicator system of SDGs using statistical data, individual SDG scores and SDG Index scores, typical indicators performance, and the major data and indicator gaps for a more comprehensive assessment of SDGs. <br> <strong>Data access</strong> The supporting data and tables are publicly available. <br> <strong>Data file</strong> All data records and supplementary tables are available in Excel format. <br>
DOI: 10.6084/m9.figshare.22340302.v1
title: Systematic evaluation of intratumoral and peripheral BCR repertoires in three cancers

description: This dataset consists of BCR repertoires from tumor tissue, draining lymph nodes and peripheral blood. Repertoires were obtaiond by 5'RACE protocol with RNA as a starting material.
DOI: 10.6084/m9.figshare.28308986.v2
title: LSB Data Paper

description: The grapevine is one of the most widely grown perennial crops worldwide. As for other species displaying clusters of small fruits, the development of single berries within a bunch is asynchronous and heterogeneous. Because of this, the study of water and solute accumulation kinetics and balance at the organ level cannot be directly extrapolated from samples of populations of fruits. In order to have an original and reliable dataset on the accumulation kinetics of the main solutes (primary and secondary metabolites and cations) and water, we analyzed fruit populations sorted according to their density and also individual berries from the onset of sugar importation to the end of phloem unloading. The studies were performed on a panel of varieties representing different metabolic contexts for the relationship between the import of organic and inorganic solutes and fruit growth, including genotypes able to import water at low fruit osmotic potential. These original data sets are suitable to revisit some aspects of the accumulation of main solutes and water in grapevine fruit and/or to perform comparative studies with other fleshy fruits.
DOI: 10.17632/t6tmh4dfwb
title: Enhancing the Use of Electromyography for Strength Coaches: A Case Study of the Isometric Squat

description: Contains all raw force data, raw and smoothed EMG data for every subject. Each files name contains the brief description
DOI: 10.17632/xmjz4f2m86
title: Model in 3D for Capacitive Deionization

description: This is a 3D model for capacitive deionization (CDI).
The model contains interfaces for fluid flow, currents, and ionic transport within the device.
DOI: 10.17632/dz476g3k42
title: Replication data for When Facebook is the Internet: The Role of Social Media in ethnic Conflict

description: This repository contains the final data set used in the analysis (mmr_data.RData), the raw data files which can be freely distributed, and the R code used to create the data and the tables and figures in the paper. See the README file as well as Appendix A for more details.
DOI: 10.6084/m9.figshare.19501324.v1
title: Results for the Zooniverse Fishing in the past project.

description: These are the results for the zooniverse project: "Fishing in the Past". A detailed report of the project can be found in the Brill publication: xxxx (in press). The zooniverse project can be found at https://www.zooniverse.org/projects/anneoverduin/fishing-in-the-past<br>This dataset is part of a research investigating fish species depicted in early modern art in the Lower Countries
DOI: 10.6084/m9.figshare.22811516.v1
title: Sampling site geographical coordiates

description: Latitude and longitude in decimal degrees for Stone Age ancient DNA samples from Mattila et al. (2023). Country codes Poland (P), Romania (R), Ukraine (U). "Verbose_population" column indicates simplified time period classification where "Mesolithic" indicates everything before European Neolithic (encompasses Mesolithic and potential Epipalaeolithic) and "Neolithic" everything after European Neolithic (encompasses Neolithic and Eneolithic).
DOI: 10.6084/m9.figshare.28425173.v1
title: Datasets for X-MACE Publication

description: Datasets for publication: Chromophores dataset contains the 5 singlet states with energies and forces, the fulvene dataset contains 2 singlet states with energies and the ch2nh2_ciopt dataset contains energies and forces for the methylammonium cation enhanced with optimized conical intersections
DOI: 10.17632/jk3xjfhn5z
title: Redefining Disproportionate Arrest Rate Data

description: This data (SPSS 29) was taken from mugshots. The skin tone of the forehead was read with a eyedropper program off the website publishing the mugshots of those arrested in Alachua County Florida. The mugshots were from two months before and two months after a mandate to stop arresting people to protect the prison population during COVID.
DOI: 10.6084/m9.figshare.19404359.v1
title: obstructive sleep apnea excel.xlsx

description: obstructive sleep apnea datasheet
DOI: 10.6084/m9.figshare.28614578.v1
title: 130U006033-wgs.vcf.gz

description: Sequencing data
DOI: 10.17632/xkwscr7fwh
title: Parallel functional reduction in the mitochondria of apicomplexan parasites

description: (1) Phylogenomics tree matrix, (2) mitochondrial metabolic protein alignments and individual phylogenies, and (3) transcriptome assemblies generated in this study.
DOI: 10.25452/figshare.plus.20492769.v1
title: THINGS-data: fMRI Regions of Interest

description: Subject specific category-selective and retinotopic regions of interest for the fMRI data. <br> Part of THINGS-data: A multimodal collection of large-scale datasets for investigating object representations in brain and behavior. <br> See related materials in Collection at: https://doi.org/10.25452/figshare.plus.c.6161151
DOI: 10.6084/m9.figshare.12585644.v2
title: IPF Pan-transcriptome

description: Supplementary material for the manuscript "Pan-transcriptome-based Candidate Therapeutic Discovery for Idiopathic Pulmonary Fibrosis"
DOI: 10.6084/m9.figshare.19902101.v1
title: Interventions among Pregnant Women in the Field of Music Therapy: A Systematic Review

description: Abstract Objective To investigate in the literature the studies on the benefits ofmusic therapy interventions among pregnant women in the prenatal, delivery and postpartum periods. Data Sources The search for articles was carried out in the following electronic databases: VHL, LILACS, SciELO, Portal CAPES, PsycINFO, ERIC, PubMed/Medline, and journals specialized in this field: Revista Brasileira de Musicoterapia (“Brazilian Journal of Music Therapy”) and Voices. Study Selection Descriptors in Portuguese (musicoterapia, gravidez, gestantes, revisão), English (music therapy, pregnancy, pregnant women, review) and Spanish (musicoterapia, embarazo, mujeres embarazadas, revisión) were used. The search was delimited between January 2009 and June 2019. The process of selection and evaluation of the articles was performed through peer review. Data Collectio n The following data were extracted: article title, year of publication, journal, author(s), database, country and date of collection, purpose of the study, sample size, type of care, intervention, instruments used, results, and conclusion. The data were organized in chronological order based on the year of publication of thestudy. Summary of the Data In total, 146 articles were identified, and only 23 studies were included in this systematic review. The articles found indicate among their results relaxation, decreased levels of anxiety, psychosocial stress and depression, decreased pain, increase in the maternal bond, improvement in the quality of sleep, control of the fetal heart rate and maternal blood pressure, and decreased intake of drugs in the postoperative period. Conclusion Music therapy during the prenatal, delivery and postpartum periods can provide benefits to pregnant women and newborns, thus justifying its importance in this field.
DOI: 10.6084/m9.figshare.21080674.v1
title: Supplementary Material for: The Effect of Auditory Cues on Static Postural Control: A Systematic Review and Meta-Analysis

description: <b><i>Introduction:</i></b> The purpose of this systematic review and meta-analysis was to summarize the results related to the effects of auditory cues on static postural control. <b><i>Methods:</i></b> MEDLINE/PubMed, EMBASE, SCOPUS, LILACS, CINAHL, CENTRAL, Web of Science, PEDro, and Google Scholar were searched from inception until September 2020. Risk of bias was evaluated by both reviewers using Newcastle-Ottawa Quality Assessment Scale (NOS). <b><i>Results:</i></b> Twelve studies with 403 participants were included in the review and 9 studies with 305 participants in the meta-analysis. Results show that auditory cues have significant effects on postural sway in the anterior-posterior direction (<i>p</i> = 0.001), postural sway in the medial-lateral direction (<i>p</i> = 0.001), and static balance (<i>p</i> = 0.001). A low to high heterogeneity was observed across all comparisons. <b><i>Conclusions:</i></b> Results of this meta-analysis revealed that auditory cues decrease postural sway in the anterior-posterior and medial-lateral direction; it also improves static balance. Thus, it can be concluded that auditory cues improve static postural control. Our results suggest that the auditory system can be a determinant of static postural control along with other sensory systems including visual, vestibular, and proprioception systems. Also, this study implies that auditory cues can be a significant therapeutic approach to improve static postural control.
DOI: 10.6084/m9.figshare.6626498.v1
title: Healthcare Provider Interview Transcripts

description: Qualitative interview data collected from nurses and clinical officers in Nairobi (NRB, MDH, TBT), Siaya (SYA), Marsabit (MBT), and Mombasa (MSA), Kenya
DOI: 10.6084/m9.figshare.9791288.v2
title: Be Dog Smart Impact data

description: Randomised controlled trial data collected as part of an impact assessment for Be Dog Smart workshops aiming to increase children's attitudes towards safety around dogs.
DOI: 10.6084/m9.figshare.12698012.v1
title: Antidepressants‌ ‌act‌ ‌by‌ ‌directly‌ ‌binding‌ ‌to‌ ‌TRKB‌ ‌neurotrophin‌ ‌receptors‌ ‌

description: repository for experimental data of bioRxiv: 757989