cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3886/e244746
title: ECIN Replication Package for "Universal Free Meals and School Suspensions"

description: We
evaluate whether providing
free meals to all students causes
changes in out-of-school suspensions for schools adopting those policies in the United States. The study builds
on earlier work that has shown null effects of universal free meals on suspensions.
Specifically, this study analyzes an updated dataset and incorporates recent
methods designed to estimate program effects when program adoption is staggered
over time. We adopt a difference-in-differences research design and exploit the
time variation in adopting provisions that permit free meals to be provided to
all enrolled students (i.e., Provisions 2 and 3 of the National School Lunch
Act, and the Community Eligibility Provision of the Healthy, Hunger-Free Kids
Act). Adopting universal meals decreases suspensions by approximately ten
percent for elementary students and six percent for middle and high school
students. These impacts are more pronounced in schools with fewer students
eligible for free and reduced-price meals in preadoption periods. We show that
differences in our conclusions from those reported previously arise primarily
out of methods that better account for staggered program adoption as opposed to
the updated dataset. This replication package provides data and code accompanying the article.
description: Not Applicable
description: Response Rates: Not Applicable
description: Presence of Common Scales: Not Applicable
description: Not Applicable
description: Elementary and Middle and High Public Schools. Smallest Geographic Unit: Schools
description: other;
DOI: 10.3886/e244746v1
title: ECIN Replication Package for "Universal Free Meals and School Suspensions"

description: We
evaluate whether providing
free meals to all students causes
changes in out-of-school suspensions for schools adopting those policies in the United States. The study builds
on earlier work that has shown null effects of universal free meals on suspensions.
Specifically, this study analyzes an updated dataset and incorporates recent
methods designed to estimate program effects when program adoption is staggered
over time. We adopt a difference-in-differences research design and exploit the
time variation in adopting provisions that permit free meals to be provided to
all enrolled students (i.e., Provisions 2 and 3 of the National School Lunch
Act, and the Community Eligibility Provision of the Healthy, Hunger-Free Kids
Act). Adopting universal meals decreases suspensions by approximately ten
percent for elementary students and six percent for middle and high school
students. These impacts are more pronounced in schools with fewer students
eligible for free and reduced-price meals in preadoption periods. We show that
differences in our conclusions from those reported previously arise primarily
out of methods that better account for staggered program adoption as opposed to
the updated dataset. This replication package provides data and code accompanying the article.
description: Not Applicable
description: Response Rates: Not Applicable
description: Presence of Common Scales: Not Applicable
description: Not Applicable
description: Elementary and Middle and High Public Schools. Smallest Geographic Unit: Schools
description: other;
DOI: 10.60905/pxxao8
title: Calma en la U. de Antioquia ayer

description: &lt;p&gt;Luego de que el Consejo Directivo decretara vacaciones la universidad estuvo en calma. Sin embargo en horas de la ma��ana numerosos estudiantes se reunieron en las afueras del campus present��ndose algunos des��rdenes. Paralelo a esto, se realiza en la ciudad un encuentro nacional de profesores para discutir la propuesta del Estatuto Docente de la Asociaci��n de Profesores de la UdeA a la luz de la problem��tica nacional del quehacer del docente universitario. A este encuentro asistieron representantes de las ciudades de Bogot��, Cali, Monter��a, Barranquilla y Bucaramanga. En dicho encuentro se propuso la creaci��n de la Asociaci��n Sindical de Profesores Universitarios, seccional de Antioquia. Tambi��n se conoci�� un comunicado de la Asociaci��n de Profesores que representa H��ctor Abad G��mez cuestionando la decisi��n de las vacaciones adelantadas, consider��ndola una medida sin fundamento ya que los profesores hab��an suspendido el paro que llevaban a cabo hace 48 horas.&lt;/p&gt;
description: CONTEXTO DE LA NOTICIA: " Lleras Restrepo propone reformas constitucionales, Nuevas l��neas de cr��dito agr��cola en Colombia, Ecopetrol recibe refiner��a de Mamonal, Rusos y norteamericanos firman contratos y pacto de misiles, defensa de mares de Latinoam��rica
"
DOI: 10.15468/g26h94
title: Three new species of Dushinckanus Brailovsky (Heteroptera, Rhyparochromidae, Myodochini), description of the male of D. camelopardus Harrington, and new distributional records for known species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Dellapé, Pablo M., Melo, María C. (2026): Three new species of Dushinckanus Brailovsky (Heteroptera, Rhyparochromidae, Myodochini), description of the male of D. camelopardus Harrington, and new distributional records for known species. Deutsche Entomologische Zeitschrift 73 (1): 1-11, DOI: 10.3897/dez.73.164078AbstractIn this contribution, the diagnostic characters of the myodochine genus Dushinckanus Brailovsky, 1979 are discussed. The male of D. camelopardus Harrington, 1987 is described for the first time, and its distribution is extended north to French Guiana, as is that of D. ashlocki Harring, 1987. Additionally, three new species from French Guiana are described. Dorsal habitus and male genitalic photographs are provided and an updated key to separate the species in the genus is given.
DOI: 10.15468/uhkvkp
title: The pygmy mole crickets (Orthoptera: Tridactylidae) of Florida, USA, with descriptions of three new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Woo, Brandon (2025): The pygmy mole crickets (Orthoptera: Tridactylidae) of Florida, USA, with descriptions of three new species. Zootaxa 5717 (4): 451-487, DOI: 10.11646/zootaxa.5717.4.1, URL: https://doi.org/10.11646/zootaxa.5717.4.1AbstractThe results of an intensive survey of Florida (U.S.A.) Pygmy Mole Crickets (Orthoptera: Tridactylidae) are presented. Six members of the family have been previously recorded from the state. This work describes three additional species and documents additional locality records for the other taxa, bringing the Florida total to nine species. Two-thirds of these species are narrowly endemic to small ranges within the state and are restricted to xeric sandhill or scrub habitats with bare patches of sand. Distributional patterns as well as conservation implications for the endemic species are discussed.
DOI: 10.15468/vngvv8
title: Primula daguanensis (Primulaceae), a new species from Yunnan, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ru, Jian, Cheng, Xin-Yu, Xu, Bo, Guo, Lian-Jin, Ju, Wen-Bin (2026): Primula daguanensis (Primulaceae), a new species from Yunnan, China. PhytoKeys 270: 223-233, DOI: 10.3897/phytokeys.270.171019AbstractPrimula daguanensis W. B. Ju, B. Xu & J. Ru is described and illustrated as a new species from Daguan County, Yunnan Province, China. It is assigned to the Primula sect. Petiolares subsect. Davidii based on its conspicuous bud scales, which are membranous and persistent at anthesis, and its coriaceous, efarinose leaves. Molecular phylogenetic analysis based on the nuclear ribosomal internal transcribed spacer (nrITS) shows it to be closely related to P. tridentifera of subsect. Petiolares, and morphological comparisons support its recognition as a distinct new species. It resembles P. epilosa, P. tridentifera, and P. bergenioides but can be distinguished by the following characters: petiole 1.0– 4.5 cm long; leaves efarinose and obovate to oblanceolate, with undulate-dentate margins; abaxial reticulate veins inconspicuous, lateral veins 5–7 pairs; calyx parted to one-third, with broadly triangular lobes; and corolla lobes truncate at the apex, dentate, and bearing an annulus. P. daguanensis is currently known only from the collection locality, and its conservation status is assessed as Data Deficient (DD) according to the IUCN Red List Categories and Criteria.
DOI: 10.15468/dl.v9qrsm
title: Occurrence Download

description: A dataset containing 7683 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Balanus glandula",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7683 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010362-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cy9uxk
title: Occurrence Download

description: A dataset containing 913 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Thalasseus acuflavidus",
 "Year 2000-2019"
 ]
}

 The dataset includes 913 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010365-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uuxfup
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Grahamia bracteata",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010363-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18471573
title: The input, synthetic training data and output of proposed point cloud denoising method

description: The data used in a Data-Centric Engineering paper.

Based on the model of Dr. Wei Lin, the data was generated and analyzed using the method proposed in the paper "Denoising image point clouds using segmentation and synthetic data for enhanced structural health analysis of tunnels."

The training dataset (2-1/2-2, 1-1~1-16) is organized in 5 columns: x, y, z, -, and flag. The predicted dataset (1-17~1-20) is organized in 7 columns: x, y, z, -, flag_syn, flag_pre, -.

In case the files are not correctly shown in folders after uploading in Zenodo: the data is organized in folds synthetic training data (2-1, 2-2, and 1-1~1-16, among which the bad dataset is deleted), log (checkpoint.pt, log_test.txt, and log_train.txt), output (1-17~1-20), file config.py for data generation, and files DPT12_0530_group1_densified_point_cloud - Cloud.subsampled.subsampled.subsampled.subsampled as the data processing result.

This study is funded by China Scholarship Council.
DOI: 10.5281/zenodo.18471574
title: The input, synthetic training data and output of proposed point cloud denoising method

description: The data used in a Data-Centric Engineering paper.

Based on the model of Dr. Wei Lin, the data was generated and analyzed using the method proposed in the paper "Denoising image point clouds using segmentation and synthetic data for enhanced structural health analysis of tunnels."

The training dataset (2-1/2-2, 1-1~1-16) is organized in 5 columns: x, y, z, -, and flag. The predicted dataset (1-17~1-20) is organized in 7 columns: x, y, z, -, flag_syn, flag_pre, -.

In case the files are not correctly shown in folders after uploading in Zenodo: the data is organized in folds synthetic training data (2-1, 2-2, and 1-1~1-16, among which the bad dataset is deleted), log (checkpoint.pt, log_test.txt, and log_train.txt), output (1-17~1-20), file config.py for data generation, and files DPT12_0530_group1_densified_point_cloud - Cloud.subsampled.subsampled.subsampled.subsampled as the data processing result.

This study is funded by China Scholarship Council.
DOI: 10.15468/dl.z9eaga
title: Occurrence Download

description: A dataset containing 13926 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-70.788256 -33.306235, -70.759801 -33.249886, -70.832354 -33.249886, -70.860838 -33.306235, -70.788256 -33.306235))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015",
 "Year is less than or equal to 2026"
 ]
}

 The dataset includes 13926 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010361-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3e5kvp
title: Occurrence Download

description: A dataset containing 4564 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leucanthemum atratum",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4564 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010366-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3kn3j
title: Occurrence Download

description: A dataset containing 1034886 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is USGS PWRC - Bird Phenology Program"
 ]
}

 The dataset includes 1034886 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010335-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q637fv
title: Occurrence Download

description: A dataset containing 1034886 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is USGS PWRC - Bird Phenology Program"
 ]
}

 The dataset includes 1034886 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010336-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60905/9lzmqk
title: Agitaci��n por el cierre de la Universidad de Antioquia

description: &lt;p&gt; Luego de la sorpresiva noticia de la suspensi��n del semestre y la dr��stica sanci��n contra 50 profesores, cuerpos del ej��rcito y la polic��a sitiaron los alrededores de la ciudad universitaria para evitar el ingreso de particulares bajo la orden del Consejo Directivo. Estudiantes y profesores se concentraron desde horas de la ma��ana para gritar consignas y manifestar su protesta por las medidas. El director del CSU, el Gobernador Jaime Echavarr��a, sesion�� con los dem��s miembros del ente administrativo en la plazuela San Ignacio, con el fin de analizar la situaci��n y avanzar en el estudio del Estatuto Docente. A esta reuni��n tambi��n asistieron delegados de: Asociaciones profesionales; Alfonso Aguirre Ceballos, estudiantes; Abel Dar��o C��spedes y profesorales; Olga Cecilia Vel��squez. Ambas Asociaciones de profesores generaron comunicados al respecto denunciando: - Asociaci��n de Profesores: La presencia de la polic��a, los procesos de persecuci��n y sanciones a maestros, medidas que quieren acabar con la U, que la Asociaci��n quiere ser expulsada del campus, que la lucha es por la dignidad del profesor, el estudiante y dem��s ciudadanos. Firman: H��ctor Abad G��mez y Luz Elena Zabala. - ASDUA: Lamenta la suspensi��n indefinida, culpabiliza a la Asociaci��n como la causante y destructiva, Rechaza m��todos violentos contra la comunidad universitaria, manifiesta cooperaci��n para resolver el problema, reclama a todos los profesores inter��s por la educaci��n. Firman: Julio Le��n Trejos y ��ngela Piedrahita.&lt;/p&gt;
description: CONTEXTO DE LA NOTICIA: "Reducci��n del presupuesto nacional; Asamblea general de las Naciones Unidas; Congreso nacional de educaci��n tecnol��gica en
Bogota; Pacto Andino reanuda conversaciones;
"
DOI: 10.5281/zenodo.18474710
title: Biology needs to become prospective

description: Data associated with "Biology needs to become prospective".

Contained are AFDB clusters and metadata from "Clustering predicted structures at the scale of the known protein universe" (Hernandez et al. 2023), a time-calibrated phylogeny from TimeTree (Kumar et al. 2022), taxonomic hierarchies accessed from the NCBI Taxonomy database, and genome/proteome statistics from the NCBI Genome resource.
DOI: 10.5281/zenodo.18474709
title: Biology needs to become prospective

description: Data associated with "Biology needs to become prospective".

Contained are AFDB clusters and metadata from "Clustering predicted structures at the scale of the known protein universe" (Hernandez et al. 2023), a time-calibrated phylogeny from TimeTree (Kumar et al. 2022), taxonomic hierarchies accessed from the NCBI Taxonomy database, and genome/proteome statistics from the NCBI Genome resource.
DOI: 10.15468/dl.5e6bbs
title: Occurrence Download

description: A dataset containing 386 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Andrena atypica"
 ]
}

 The dataset includes 386 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010370-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31244857
title: misteli_optoloop_FigS1C

description: Figure S1C data
DOI: 10.6084/m9.figshare.31244857.v1
title: misteli_optoloop_FigS1C

description: Figure S1C data
DOI: 10.5281/zenodo.18474620
title: Reprogramming of stroma-derived chemokine networks drives the loss of tissue organization in nodal B cell lymphoma

description: Abstract:

Lymph node (LN) function requires the organization of cells into higher order spatial units. However, the principles governing LN architecture in health and disease remain poorly understood. Here, we utilized single-cell and spatial mapping to interrogate the mechanisms directing immune cell organization in human LNs and its disruption in architecturally distinct lymphoma entities: indolent follicular lymphoma (FL) and aggressive diffuse large B cell lymphoma (DLBCL). Our data substantiate the central role of LN-resident stromal cells in chemokine-driven lymphocyte zonation and reveal an inflammatory feedback loop fueled by tumor-reactive T cells, triggering stromal remodeling, progressive loss of homeostatic chemokine gradients and tissue organization from non-malignant to FL and DLBCL. Loss of homeostatic chemokines was associated with adverse patient survival, identifying the underlying architectural rearrangement as a key event during lymphomagenesis. Collectively, our results highlight the principles of LN organization and suggest how lymphoma-induced microenvironmental reprogramming drives loss of tissue organization.

 

Data overview:

Seurat object for mIF datamIF_seurat_final.rds

Seurat object for scRNA-seq lymph node datascRNA_LN_stromal_cells.rds

Seurat object for spatial transcriptomics/Xenium dataxenium_merged_seurat.rds

Raw molecule-level transcript coordinates Xenium outputs per sampleXenium_transcripts_FL.parquetXenium_transcripts_DLBCL.parquet

Files related to Figure 3 - TCR-seq analysis202402_cd8_TCRobj_mapped.rds202402_TCRrepertoire.rds

Files related to Figure 3 - SCENIC/GRN analysisGRN_90pt.rds

Files related to Figure 3 - Seurat object for scRNA-seq co-culture dataCoCulture_DLBCL.rds

Files related to Figure 4 - Scriabin analysisinteraction_potential.rdsmIF_knn_k6_pct_totalinteractions.csvmIF_knn_k6_pct_totalinteractions_rLN.csv

Files related to Figure 5 - Bulk transcriptomicscibersortx_signature_matrix.txt
DOI: 10.5281/zenodo.17802308
title: Reprogramming of stroma-derived chemokine networks drives the loss of tissue organization in nodal B cell lymphoma

description: Abstract:

Lymph node (LN) function requires the organization of cells into higher order spatial units. However, the principles governing LN architecture in health and disease remain poorly understood. Here, we utilized single-cell and spatial mapping to interrogate the mechanisms directing immune cell organization in human LNs and its disruption in architecturally distinct lymphoma entities: indolent follicular lymphoma (FL) and aggressive diffuse large B cell lymphoma (DLBCL). Our data substantiate the central role of LN-resident stromal cells in chemokine-driven lymphocyte zonation and reveal an inflammatory feedback loop fueled by tumor-reactive T cells, triggering stromal remodeling, progressive loss of homeostatic chemokine gradients and tissue organization from non-malignant to FL and DLBCL. Loss of homeostatic chemokines was associated with adverse patient survival, identifying the underlying architectural rearrangement as a key event during lymphomagenesis. Collectively, our results highlight the principles of LN organization and suggest how lymphoma-induced microenvironmental reprogramming drives loss of tissue organization.

 

Data overview:

Seurat object for mIF datamIF_seurat_final.rds

Seurat object for scRNA-seq lymph node datascRNA_LN_stromal_cells.rds

Seurat object for spatial transcriptomics/Xenium dataxenium_merged_seurat.rds

Raw molecule-level transcript coordinates Xenium outputs per sampleXenium_transcripts_FL.parquetXenium_transcripts_DLBCL.parquet

Files related to Figure 3 - TCR-seq analysis202402_cd8_TCRobj_mapped.rds202402_TCRrepertoire.rds

Files related to Figure 3 - SCENIC/GRN analysisGRN_90pt.rds

Files related to Figure 3 - Seurat object for scRNA-seq co-culture dataCoCulture_DLBCL.rds

Files related to Figure 4 - Scriabin analysisinteraction_potential.rdsmIF_knn_k6_pct_totalinteractions.csvmIF_knn_k6_pct_totalinteractions_rLN.csv

Files related to Figure 5 - Bulk transcriptomicscibersortx_signature_matrix.txt
DOI: 10.15468/cbzm7h
title: Multi-gene phylogeny and taxonomy of Hydnum (Hydnaceae, Cantharellales) including a global phylogeny of ITS sequences for the genus

description: This dataset contains the digitized treatments in Plazi based on the original journal article Xu, Yi-Hua, Zeng, Long, Xu, Tai-Min, Song, Chang-Ge, Shen, Lu-Lu, Sun, Yi-Fei, Cui, Bao-Kai (2026): Multi-gene phylogeny and taxonomy of Hydnum (Hydnaceae, Cantharellales) including a global phylogeny of ITS sequences for the genus. IMA Fungus 17: e 172544, DOI: 10.3897/imafungus.17.172544AbstractHydnum species are called “ hedgehogs ” or “ tooth fungi ” because of their spinose hymenophores. Considering its edible and ectomycorrhizal nature, Hydnum has been found to possess high economic and ecological values. In the present study, a multi-gene (ITS - nLSU - tef 1 α) phylogenetic analysis and detailed morphological observations of the genus Hydnum were carried out. Based on the distinctive morphological characteristics and the phylogenetic evidence, two new species were described: H. flosculoides sp. nov. and H. robustum sp. nov. from China. Moreover, ITS is the most frequently used DNA region for identification of Hydnum species, but its effectiveness is uncertain. A total of 1,293 ITS sequences of Hydnum could be attributed to six subgenera and four clades with uncertain position (Clade Insulana and Incertae sedis 1, 2, 3), representing 84 morphologically and phylogenetically identified species, 14 putatively new phylospecies and 17 singletons. Furthermore, two new species were described and provided with illustrations. The morphological characters, phylogenetic delimitation, geographic distribution and habitat preferences of Hydnum were discussed, and the effectiveness of the ITS region was also evaluated to enhance rapid identification.