cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh3587860.08fu
title: SH3587860.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.26093/cds/vizier.16911387
title: Spectroscopy of the Galactic bar. I.

description: VizieR online Data Catalogue associated with article published in journal Astronomical Journal (AAS) with title 'Fabry-Perot absorption line spectroscopy of the Galactic bar. I. Kinematics.' (bibcode: 2009ApJ...691.1387R)
DOI: 10.15156/bio/sh3587861.08fu
title: SH3587861.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh3587862.08fu
title: SH3587862.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.26093/cds/vizier.16911400
title: Absolute properties of CM Dra

description: VizieR online Data Catalogue associated with article published in journal Astronomical Journal (AAS) with title 'Absolute properties of the low-mass eclipsing binary CM Draconis.' (bibcode: 2009ApJ...691.1400M)
DOI: 10.15156/bio/sh3587863.08fu
title: SH3587863.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh3587864.08fu
title: SH3587864.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh3587865.08fu
title: SH3587865.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25549/one-c4-15213
title: ONE, Inc. meeting minutes (1959/1964)

description: ONE, Inc. meeting minutes for the education division planning committee (1959/1964)
DOI: 10.15156/bio/sh3587866.08fu
title: SH3587866.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh3587867.08fu
title: SH3587867.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.26093/cds/vizier.16911560
title: Dense core survey in the Orion B cloud

description: VizieR online Data Catalogue associated with article published in journal Astronomical Journal (AAS) with title 'A survey of dense cores in the Orion B cloud.' (bibcode: 2009ApJ...691.1560I)
DOI: 10.15156/bio/sh3587868.08fu
title: SH3587868.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh3587869.08fu
title: SH3587869.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25549/one-c4-15215
title: ONE, Inc. meeting minutes (1959/1964)

description: ONE, Inc. meeting minutes for the education division planning committee (1959/1964)
DOI: 10.26093/cds/vizier.16911862
title: Line-strength indices for 74 early-type galaxies

description: VizieR online Data Catalogue associated with article published in journal Astronomical Journal (AAS) with title 'Kinematic properties and stellar populations of faint early-type galaxies. II. Line-strength measurements of central Coma galaxies.' (bibcode: 2009ApJ...691.1862M)
DOI: 10.6084/m9.figshare.20479778
title: Additional file 3 of Metagenomic assembly reveals hosts and mobility of common antibiotic resistome in animal manure and commercial compost

description: Additional file 3. Dataset 2 Bacterial community compositions in manure and compost samples at phylum level.
DOI: 10.6084/m9.figshare.20479775
title: Additional file 2 of Metagenomic assembly reveals hosts and mobility of common antibiotic resistome in animal manure and commercial compost

description: Additional file 2. Dataset 1 Concentrations of antibiotics in manures and composts. Nineteen antibiotics including: sulfadiazine (SDZ), sulfadimethoxine (SMX), sulfamethoxazole (SMZ), sulfachlorpyridazine (SCP), tetracycline (TC), chlortetracycline (CTC), oxytetracycline (OTC), doxycycline (DC), erythromycin (ETM), tylosin (TYL), roxithromycin (RTM), norfloxacin (NFX), ciprofloxacin (CFX), enrofloxacin (EFX) and lomefloxacin (LFX), florfenicol (FF) and chloramphenicol (CAP), ceftiofur (CEFT).
DOI: 10.6084/m9.figshare.7300946
title: Additional file 1: of Common ancestry of heterodimerizing TALE homeobox transcription factors across Metazoa and Archaeplastida

description: Table S1. Genomic resources used in this study. Table S2. Archaeplastidal homeobox collection of TALE protein analyzed in this study. Table S3. KNOX domain homology among KNOX classes. Table S4. Primers used in this study. Table S5. Yeast-two-hybrid constructs used in this study. Table S6. Homeobox profile in Trebouxiophyceae. (XLSX 370 kb)
DOI: 10.6084/m9.figshare.7300946.v1
title: Additional file 1: of Common ancestry of heterodimerizing TALE homeobox transcription factors across Metazoa and Archaeplastida

description: Table S1. Genomic resources used in this study. Table S2. Archaeplastidal homeobox collection of TALE protein analyzed in this study. Table S3. KNOX domain homology among KNOX classes. Table S4. Primers used in this study. Table S5. Yeast-two-hybrid constructs used in this study. Table S6. Homeobox profile in Trebouxiophyceae. (XLSX 370 kb)
DOI: 10.6084/m9.figshare.23625513
title: Additional file 2 of The prognostic value and immune landscaps of m6A/m5C-related lncRNAs signature in the low grade glioma

description: Additional file 2. Supplemental Tables.
DOI: 10.6084/m9.figshare.21528582.v1
title: The association between bedtime at night and hypertension in adults

description: This research was conducted to explore the association between bedtime at night and the prevalence of hypertension in adults. We conducted a cross-sectional study of 14,536 participants with data from the NHANES database. Bedtime was determined from the question in the sleep questionnaire: ‘What time do you usually fall asleep on weekdays or workdays?.’ Hypertension was defined as systolic blood pressure (SBP) ≥ 140 mmHg, or diastolic blood pressure (DBP) ≥ 90 mmHg, or having been told by a doctor to have high blood pressure, or taking antihypertensive medication. We conducted a weighted multiple logistic regression analysis to explore the relationship between bedtime at night and the prevalence of hypertension in adults. The association between bedtime and hypertension showed a significantly U-shaped relationship. People who went to bed at 23:00 had the lowest risk of developing hypertension (OR, 0.68 [95%CI, 0.58, 0.81]). This U-shaped association still existed in different genders. In males (n = 7159), the adjusted OR was still lowest at 23:00. However, the adjusted OR was lowest at 0:00 in females(n = 7377). The interaction effect between bedtime and gender was significant (P = 0.0187). With the delay in bedtime, the association between bedtime and hypertension showed a significantly U-shaped relationship. Falling asleep at 23:00 has the lowest risk of developing hypertension.
DOI: 10.6084/m9.figshare.20479692.v1
title: Additional file 7 of Molecular basis of high temperature-induced bolting in lettuce revealed by multi-omics analysis

description: Additional file 7. DMR-associated genes.
DOI: 10.6084/m9.figshare.22578288.v1
title: ROOM-TEMPERATURE PPB-LEVEL ANILINE VAPOR SENSOR FUNCTIONALIZED WITH UIO-66-SO3H

description: Aniline vapor must be immediately detected at low concentrations since it is a hazardous gaseous chemical. Here, ppb level aniline vapor is detected using the metal-organic framework of UIO-66-SO3H. Utilizing a quartz crystal microbalance (QCM) sensing platform, the aniline adsorption-induced mass change of UIO-66-SO3H is converted to a signal of frequency shift. The sensor can detect a concentration of 20 ppb of aniline vapor and has good sensitivity for this purpose. Additionally, the sensor’s repeatability and stability are satisfactory. Notably, the sensor’s selectivity is prominent. Its response to aniline is much higher than that of ten interfering gases and BTEX vapor. And even in conditions with varying levels of humidity, this sensor maintains response stability.
DOI: 10.6084/m9.figshare.20479781
title: Additional file 4 of Metagenomic assembly reveals hosts and mobility of common antibiotic resistome in animal manure and commercial compost

description: Additional file 4. Reads quality control results and taxonomy of antibiotic resistant contigs. Dataset 3 Multiqc results of sequenced reads. Dataset 4 The classification results of antibiotic resistant contigs by CAT and Kraken. Dataset 5 LCA mapping each k-mer.
DOI: 10.6084/m9.figshare.23625528.v1
title: Additional file 3 of Reduced intestinal lipid absorption improves glucose metabolism in aged G2-Terc knockout mice

description: Additional file 3.
DOI: 10.6084/m9.figshare.23625513.v1
title: Additional file 2 of The prognostic value and immune landscaps of m6A/m5C-related lncRNAs signature in the low grade glioma

description: Additional file 2. Supplemental Tables.
DOI: 10.6084/m9.figshare.20479781.v1
title: Additional file 4 of Metagenomic assembly reveals hosts and mobility of common antibiotic resistome in animal manure and commercial compost

description: Additional file 4. Reads quality control results and taxonomy of antibiotic resistant contigs. Dataset 3 Multiqc results of sequenced reads. Dataset 4 The classification results of antibiotic resistant contigs by CAT and Kraken. Dataset 5 LCA mapping each k-mer.
DOI: 10.6084/m9.figshare.19431364
title: The role of FYCO1-dependent autophagy in lens fiber cell differentiation

description: FYCO1 (FYVE and coiled-coil domain containing 1) is an adaptor protein, expressed ubiquitously and required for microtubule-dependent, plus-end-directed transport of macroautophagic/autophagic vesicles. We have previously shown that loss-of-function mutations in <i>FYCO1</i> cause cataracts with no other ocular and/or extra-ocular phenotype. Here, we show <i>fyco1</i> homozygous knockout (<i>fyco1<sup>−/−</sup></i>) mice recapitulate the cataract phenotype consistent with a critical role of FYCO1 and autophagy in lens morphogenesis. Transcriptome coupled with proteome and metabolome profiling identified many autophagy-associated genes, proteins, and lipids respectively perturbed in <i>fyco1<sup>−/−</sup></i> mice lenses. Flow cytometry of <i>FYCO1</i> (c.2206C&gt;T) knock-in (KI) human lens epithelial cells revealed a decrease in autophagic flux and autophagic vesicles resulting from the loss of FYCO1. Transmission electron microscopy showed cellular organelles accumulated in <i>FYCO1</i> (c.2206C&gt;T) KI lens-like organoid structures and in <i>fyco1<sup>−/−</sup></i> mice lenses. In summary, our data confirm the loss of FYCO1 function results in a diminished autophagic flux, impaired organelle removal, and cataractogenesis. <b>Abbreviations:</b> CC: congenital cataracts; DE: differentially expressed; ER: endoplasmic reticulum; FYCO1: FYVE and coiled-coil domain containing 1; hESC: human embryonic stem cell; KI: knock-in; OFZ: organelle-free zone; qRT-PCR: quantitative real-time PCR; PE: phosphatidylethanolamine; RNA-Seq: RNA sequencing; SD: standard deviation; sgRNA: single guide RNA; shRNA: shorthairpin RNA; TEM: transmission electron microscopy; WT: wild type
DOI: 10.6084/m9.figshare.6848576.v1
title: Additional file 1: of Conserved phylogenetic distribution and limited antibiotic resistance of class 1 integrons revealed by assessing the bacterial genome and plasmid collection

description: Â The integron-integrase database constructed and curated using bioinformatics pipeline and whole genome analysis in this study, covering 3,384 complete and non-redundant integrases. (ZIP 11490Â kb)
DOI: 10.5281/zenodo.10623727
title: Ötzit! dataset

description: This resource contains the data gathered using the Ötzit! game the for the Zeit.shift project.
DOI: 10.5281/zenodo.10623728
title: Ötzit! dataset

description: This resource contains the data gathered using the Ötzit! game the for the Zeit.shift project.
DOI: 10.6084/m9.figshare.12511376
title: Additional file 11 of Fulvic acid ameliorates drought stress-induced damage in tea plants by regulating the ascorbate metabolism and flavonoids biosynthesis

description: Additional file 11. The information of DEGs and DEMs involved in glutathione metabolism.
DOI: 10.6084/m9.figshare.6848624.v1
title: MOESM1 of The metabolic syndrome modifies the mRNA expression profile of extracellular vesicles derived from porcine mesenchymal stem cells

description: Additional file 1. Individual mRNA expression levels obtained by RNAseq in Lean- and MetS-MSCs and their daughter EVs (Mvex) (nÂ =Â 5 each). Expression values for each gene (Raw Counts) were normalized by the total number of reads per sample and corrected for gene length (reads per kilobasepair per million mapped reads, RPKM).
DOI: 10.6084/m9.figshare.21528582
title: The association between bedtime at night and hypertension in adults

description: This research was conducted to explore the association between bedtime at night and the prevalence of hypertension in adults. We conducted a cross-sectional study of 14,536 participants with data from the NHANES database. Bedtime was determined from the question in the sleep questionnaire: ‘What time do you usually fall asleep on weekdays or workdays?.’ Hypertension was defined as systolic blood pressure (SBP) ≥ 140 mmHg, or diastolic blood pressure (DBP) ≥ 90 mmHg, or having been told by a doctor to have high blood pressure, or taking antihypertensive medication. We conducted a weighted multiple logistic regression analysis to explore the relationship between bedtime at night and the prevalence of hypertension in adults. The association between bedtime and hypertension showed a significantly U-shaped relationship. People who went to bed at 23:00 had the lowest risk of developing hypertension (OR, 0.68 [95%CI, 0.58, 0.81]). This U-shaped association still existed in different genders. In males (n = 7159), the adjusted OR was still lowest at 23:00. However, the adjusted OR was lowest at 0:00 in females(n = 7377). The interaction effect between bedtime and gender was significant (P = 0.0187). With the delay in bedtime, the association between bedtime and hypertension showed a significantly U-shaped relationship. Falling asleep at 23:00 has the lowest risk of developing hypertension.