DOI: 10.6084/m9.figshare.12847367
title: Microclimate and vectorial capacity for dengue transmission in Athens, GA

description: These data were used to generate the figures for <br>Wimberly, M. C., J. K. Davis, M. V. Evans, A. Hess, P. M. Newberry, N. Solano-Asamoah, and C. C. Murdock (In Press) Land cover affects microclimate and temperature suitability for arbovirus transmission in an urban landscape, <i>PLoS Neglected Tropical Diseases</i>. <br>Details of the individual files in the archive are provided below:<br>tempmaxstack.tif<br>Predicted maximum daily temperatures in degrees C. The image contains 118 bands, each representing one day from June 15, 2018 through October 10, 2018. <br>tempminstack.tif<br>Predicted minimum daily temperatures in degrees C. The image contains 118 bands, each representing one day from June 15, 2018 through October 10, 2018. <br>vcstack_1.tif, vcstack_2.tif, vcstack_3.tif, vcstack_4.tif<br>Monthly estimates of mosquito life history traits and vectorial capacity: 1) June-July, 2) July-August, 3) August-September, 4) September-October.Each image has 13 bands:<br>1: biting rate (a)2: eggs per female per day (EFD)3: egg-to-adult survival (pEA)4: mosquito development rate (MDR)5: longevity (lf)6: transmission probability (b)7: infection probability (c)8: extrinsic incubation period (EIR)9: mortality rate (mu)10: mosquito abundance (mechanistic estimate)11: mosquito abundance (empirical estimate)12: vectorial capacity (based on mechanistic estimate of mosquito abundance)13: vectorial capacity (based on empirical estimate of mosquito abundance)<br>imperv30.tif<br>Impervious surface cover estimated using 2018 Sentinel-2 imagery. The image has a single band. Values are in percent cover (0-100).<br>treecov30.tif<br>Tree cover estimated using 2018 Sentinel-2 imagery. The image has a single band. Values are in percent cover (0-100).<br>ndwi.tif<br>Normalized difference water index estimated using green and near-infrared bands from 2018 Sentinel-2 imagery. The image has a single band. Values are dimensionless indices that can be thresholded to identify water bodies.<br>micro_2018_daily_data.csv<br>Daily summaries of 2018 microclimate data recorded using field data loggers. The table contains the following fields:<br>Date: Date of microclimate recordSite: Side codenum_temp: Number of temperature observationsnum_rh: Number of humidity observationsmean_temp: Mean temperature (degrees C)min_temp: Minimum temperature (degrees C)max_temp: Maximum temperature (degrees C)mean_rh: Mean relative humidity (%)min_rh: Minimum relative humidity (%)max_rh: Maximum relative humidity (%)<br>logger-site-daily.csv<br>Daily microclimate summaries from 2016-2017. The table contains the following fields:<br>day: Date of microclimate recordSite: Site codeTemp_mean: Mean temperature (degrees C)RH_mean: Mean relative humidity (%)Temp_min: Minimum temperature (degrees C)RH_min: Minimum relative humidity (%)Temp_max: Maximum temperature (degrees C)RH_max: Maximum relative humidity (%)<br>albo-abundance.csv<br>Mosquito trapping data from 2016-2017. The table contains the following fields:<br>Site: Site codeDate: Trapping dateSpecies: Mosquito speciesSex: Mosquito sexcount: Number of mosquitoes trappedclass: Type of site (Rural, Suburban, or Urban)week.no: Number of weeks since the start of the field study<br>