cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.958885
title: Intensity index of pastoral activities reconstructed from Lake Gers sediments, over the last 4600 years

description: Method used to calculate the index: This index has been calculated on the basis of pastoral indicators obtained from the coprophilous fungi spore analysis and the DNA metabarcoding approach targeting plants (ruderal/nitrophilous taxa associated with pastoralism) and mammals (for domesticated animals). The selected pastoral indicators, here, are Sporormiella sp. for fungi spores, Plantago sp. and Rumex sp. for plants, and Bos, Ovis and Capra hircus for mammals. The index is calculated, after a transformation of each of these indicators (calculation of a z-score), as the average value of all these standardized indicators. Method used to produce the sedimentary DNA datasets: DNA sequences were produced by using g (5'-GGGCAATCCTGAGCCAA-3') and h (5'-CCATTGAGTCTCTGCACCTATC-3') primers for plants and MamP007F (5'-CGAGAAGACCCTATGGAGCT-3') and MamP007R (5'-CCGAGGTCRCCCCAACC-3') primers and the human-blocking primer (5'-GGAGCTTTAATTTATTAATGCAAACAGTACCC-3') for mammals. The sequences have been produced by the Illumina technology (HiSeq instrument). The bioinformatic treatment of the sequences was operated applying the Obitool program (Boyer, F. et al. OBITOOLS:aUNIX-inspired software package for DNA metabarcoding. Mol. Ecol. Resour. 16, 176–182 (2016)) and following the procedure described in Giguet-Covex et al. New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality. Scientific Reports. 9, 14676 (2019) (DOI https://doi.org/10.1038/s41598-019-50339-1). Further filtering treatments were then applied, as also described in Giguet-Covex et al. 2019. These second treatments allow the removal of 1) taxa assigned to a reference taxon at &lt;95 % of sequence identity, 2) potential contaminations (based on sampling, extraction and PCR controls, and recognition of exotic taxa) and 3) stochastic detections. Several analytical replicates by samples were performed (8 for both, the plants and mammals). Data are presented in number of positive replicates by sample. A replicate is considered as positive if more than 5 sequences are detected.
DOI: 10.1594/pangaea.717935
title: Radiosonde measurements from station Boulder, SURFRAD (2005-02)

description: Start location: Denver, CO; Distance from radiation site: 40 km; If launch time is exactly 00Z or 12Z, the actual launch time is likely unknown
DOI: 10.1594/pangaea.664187
title: Oceanography at CTD/bottle station IFREMER_1028
DOI: 10.1594/pangaea.755276
title: (Table 2) Components of ODP Hole 114-699A sediments
DOI: 10.1594/pangaea.929106
title: Grain size classes of the dust fraction of ODP Site 177-1090

description: Grain sizes analysed with laser particle sizer Malvern Mastersizes 2000 at ETH Zurich, Switzerland. The name of the samples includes the sample depth (e.g. 0.01 = 0.00-0.01 m core depth).
DOI: 10.1594/pangaea.497396
title: Physical oceanography from BT during cruise U06XX00200B_1942
DOI: 10.1594/pangaea.719065
title: Radiosonde measurements from station Bondville (2006-12)

description: Start location: Lincoln, IL; Distance from radiation site: 82 km; If launch time is exactly 00Z or 12Z, the actual launch time is likely unknown
DOI: 10.1594/pangaea.498112
title: Physical oceanography from BT during cruise U58XX01013B_1953
DOI: 10.1594/pangaea.719922
title: Ultra-violet measurements from station Desert Rock (1998-04)

description: Version 2, 2009-06-16. UV-b values were originally given in mW/m² and then erroneously imported in W/m² using the same numbers. The numbers have been corrected (divided by 1000) on 2017-02-08.
DOI: 10.1594/pangaea.719447
title: Radiosonde measurements from station Bondville (2000-05)

description: Version 2, 2009-06-15; Start location: Lincoln, IL; Distance from radiation site: 82 km; If launch time is exactly 00Z or 12Z, the actual launch time is likely unknown
DOI: 10.1594/pangaea.809067
title: (Appendix - Table 2) Carbon and pyrolysis assay characteristics at DSDP Hole 79-545
DOI: 10.1594/pangaea.721575
title: Ultra-violet measurements from station Fort Peck (2002-02)

description: Version 2, 2009-06-19. UV-b values were originally given in mW/m² and then erroneously imported in W/m² using the same numbers. The numbers have been corrected (divided by 1000) on 2017-02-03.
DOI: 10.1594/pangaea.947027
title: δ¹⁸O and δ¹³C of Globorotalia crassaformis from IODP Site 306-U1313
DOI: 10.1594/pangaea.809068
title: (Appendix - Table 3) Carbon and pyrolysis assay characteristics at DSDP Hole 79-546
DOI: 10.1594/pangaea.958886
title: Intensity index of pastoral activities reconstructed from Lake Verney sediments, over the last 4600 years

description: Method used to calculate the index: This index has been calculated on the basis of pastoral indicators obtained from the DNA metabarcoding approach targeting plants (ruderal/nitrophilous taxa associated with pastoralism) and mammals (for domesticated animals). The selected pastoral indicators, here, are Plantago sp. and Rumex sp. for plants, and Bos and Ovis for mammals. They are standardized by calculating a z-score. Then, the index is calculated as the average of all these standardized indicators.Method used to generate sediment DNA datasets: DNA sequences were generated using g (5'-GGGCAATCCTGAGCCAA-3') and h (5'-CCATTGAGTCTCTGCACCTATC-3') primers for plants and MamP007F (5'-CGAGAAGACCCTATGGAGCT-3') and MamP007R (5'-CCGAGGTCRCCCCAACC-3') primers and the human-blocking primer (5'-GGAGCTTTAATTTATTAATGCAAACAGTACCC-3') for mammals. The sequences have been produced by the Illumina technology (HiSeq instrument). The bioinformatic treatment of the sequences was operated applying the Obitool program (Boyer, F. et al. OBITOOLS:aUNIX-inspired software package for DNA metabarcoding. Mol. Ecol. Resour. 16, 176–182 (2016)) and following the procedure described in Giguet-Covex et al. New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality. Scientific Reports. 9, 14676 (2019) (DOI https://doi.org/10.1038/s41598-019-50339-1). Further filtering treatments were then applied, as also described in Giguet-Covex et al. 2019. These second treatments allow the removal of 1) taxa assigned to a reference taxon at &lt;95 % of sequence identity, 2) potential contaminations (based on sampling, extraction and PCR controls, and recognition of exotic taxa) and 3) stochastic detections. Multiple analytical replicates by samples were performed (12 for both, the plants and mammals). Data are presented in number of positive replicates by sample. A replicate is considered as positive if more than 5 sequences are detected.
DOI: 10.1594/pangaea.947026
title: δ¹⁸O and δ¹³C of Cibicidoides wuellerstorfi from IODP Site 306-U1313
DOI: 10.1594/pangaea.901299
title: Other measurements at 10 m from station Rock Springs (2019-01)
DOI: 10.1594/pangaea.958960
title: Intensity index of agro-pastoral activities reconstructed from Lake La Thuile sediments, over the last 6400 years

description: Method used to calculate the index: This index has been calculated on the basis of agro-pastoral indicators obtained from the DNA metabarcoding approach targeting plants (ruderal/nitrophilous taxa associated with pastoralism and crops) and mammals (for domesticated animals). The selected agro-pastoral indicators, here, are Plantago sp., Rumex sp., Cannabis sativa, Vicia faba, Juglandaceae, Pyrus sp., Prunus sp., and Vitaceae for plants, and Bos and Ovis for mammals. They are standardized by calculating a z-score. Then, the index is calculated as the average of all these standardized indicators.Method used to generate sediment DNA datasets: DNA sequences were generated using g (5'-GGGCAATCCTGAGCCAA-3') and h (5'-CCATTGAGTCTCTGCACCTATC-3') primers for plants and MamP007F (5'-CGAGAAGACCCTATGGAGCT-3') and MamP007R (5'-CCGAGGTCRCCCCAACC-3') primers and the human-blocking primer (5'-GGAGCTTTAATTTATTAATGCAAACAGTACCC-3') for mammals. The sequences have been produced by the Illumina technology (HiSeq instrument). The bioinformatic treatment of the sequences was operated applying the Obitool program (Boyer, F. et al. OBITOOLS:aUNIX-inspired software package for DNAmetabarcoding. Mol. Ecol. Resour. 16, 176–182 (2016)) and following the procedure described in Giguet-Covex et al. New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality. Scientific Reports. 9, 14676 (2019) (DOI https://doi.org/10.1038/s41598-019-50339-1). Further filtering treatments were then applied, as also described in Giguet-Covex et al. 2019. These second treatments allow the removal of 1) taxa assigned to a reference taxon at &lt;95 % of sequence identity, 2) potential contaminations (based on sampling, extraction and PCR controls, and recognition of exotic taxa) and 3) stochastic detections. Multiple analytical replicates by samples were performed (4 for the plants and 12 for the mammals). Data are presented in number of positive replicates by sample. A replicate is considered as positive if more than 5 sequences are detected.
DOI: 10.1594/pangaea.958979
title: Erosion intensity recorded in Lake Anterne (North-western Alps) over the Holocene

description: Information on the dataset production: The sediment record of Lake Anterne is mostly made of flood deposits characterized by the succession of three facies: a coarse-grained and well-sorted sediment facies, a less sorted with finer particles sediment facies and a clayey cap, from the bottom to the top. The thickness of these deposits varies from millimeters to tens of centimeters. Only the deposits greater than 5 millimeters were identified and listed. Based on the age-depth model built without taking into account these instantaneous events (see the list of radiocarbon dates in https://doi.org/10.1594/PANGAEA.842827 and the associated manuscript Giguet-Covex, C et al. (2011): Changes in erosion patterns during the Holocene in a currently treeless subalpine catchment inferred from lake sediment geochemistry (Lake Anterne, 2063 m a.s.l., NW French Alps): The role of climate and human activities. The Holocene, 21(4), 651-665, https://doi.org/10.1177/0959683610391320), a flood frequency has been calculated with a 101-running window. This record is used as a proxy of erosion intensity. Another proxy for erosion is the continuous sedimentation rate, which also mostly includes flood deposits but with a thickness lower than 5 mm. The sum of this sedimentation rate with the thickness of flood deposits higher than 5 mm provides a "total accumulation rate" which reflects the total erosion dynamics in this catchment. The signals have been standardized by calculating z-scores.
DOI: 10.1594/pangaea.958980
title: Erosion intensity recorded in Lake Gers (North-western Alps) over the last 4600 years

description: Information on the production of the dataset: The sediment record of Lake Gers consists partly of flood deposits characterised by the succession of three facies: coarse-grained and well-sorted sediment facies, a less sorted sediment facies with finer particles and a clayey cap, from bottom to top. Based on the age-depth model constructed without considering these instantaneous events (see Bajard et al. 2020), a flood frequency with a window of 101 years was calculated. This record is used as a proxy for erosion intensity. Another proxy for erosion is the continuous sedimentation rate (i.e. sedimentation between flood deposits). The sum of this sedimentation rate with the thickness of the flood deposits provides a "total accumulation rate" which reflects the total erosion dynamics in this catchment. The signals have been standardized by calculating z-scores.
DOI: 10.1594/pangaea.722053
title: Ultra-violet measurements from station Goodwin Creek (2007-06)

description: UV-b values were originally given in mW/m² and then erroneously imported in W/m² using the same numbers. The numbers have been corrected (divided by 1000) on 2017-02-03.
DOI: 10.1594/pangaea.917100
title: 1-Hz PPP displacements at GEONET station 0925 during the 2011 Tohoku Mw9.0 earthquake
DOI: 10.1594/pangaea.718532
title: Basic measurements of radiation at station Boulder, SURFRAD (2001-03)

description: Version 2, 2009-06-12
DOI: 10.1594/pangaea.775014
title: Continuous meteorological observations at Neumayer station (2003-04)
DOI: 10.1594/pangaea.775161
title: Continuous meteorological observations at Neumayer station (2010-01)
DOI: 10.1594/pangaea.477268
title: Hydrochemistry measured on water bottle samples at station NPac_1985_TT_47Na/12-1

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.665527
title: Oceanography at CTD/bottle station IFREMER_2367
DOI: 10.1594/pangaea.722954
title: Other measurements at 10 m from station Rock Springs (1998-06)

description: Version 2, 2009-06-26
DOI: 10.1594/pangaea.746422
title: (Table 2) Occurrence of spore and pollen species in ODP Hole 113-692B

description: x = present, - = absent
DOI: 10.1594/pangaea.721327
title: Other measurements at 10 m from station Fort Peck (1995-03)

description: Version 2, 2009-06-19
DOI: 10.1594/pangaea.674508
title: Radiosonde measurements from Neumayer Station (2005-06)
DOI: 10.1594/pangaea.958992
title: Erosion intensity recorded in Lake Verney (North-western Alps) over the last 4600 years

description: Information on the production of the dataset: The erosion record from Lake Verney has been produced from the calculation of the continuous sedimentation rate (see Bajard et al. 2017). The signal has been standardized by calculating a z-score.
DOI: 10.1594/pangaea.677990
title: Expanded measurements from Neumayer Station (2000-01)

description: 99999: No clouds detected
DOI: 10.1594/pangaea.719334
title: Ultra-violet measurements from station Bondville (1998-01)

description: Version 2, 2009-06-15. UV-b values were originally given in mW/m² and then erroneously imported in W/m² using the same numbers. The numbers have been corrected (divided by 1000) on 2017-02-09.
DOI: 10.1594/pangaea.956246
title: Ultra-violet measurements from station Desert Rock (2021-05)
DOI: 10.1594/pangaea.752099
title: Meteorological observations during SEVERN cruise from Port Antonio to The Downs started at 1794-06-03
DOI: 10.1594/pangaea.956247
title: Other measurements at 10 m from station Desert Rock (2021-05)
DOI: 10.1594/pangaea.956250
title: Other measurements at 10 m from station Desert Rock (2021-06)
DOI: 10.1594/pangaea.477660
title: Hydrochemistry measured on water bottle samples at station SPac_1967_ET_28S/149

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.750477
title: Meteorological observations during LIVERPOOL cruise from Table Bay to Portsmouth started at 1761-05-08
DOI: 10.1594/pangaea.757963
title: Basic measurements of radiation at station Bermuda (1999-03)
DOI: 10.1594/pangaea.752465
title: Meteorological observations during TERPSICHORE cruise from Acheen to Madras started at 1802-08-07
DOI: 10.1594/pangaea.763808
title: (Table 2) Concentrations of dissolved and particulate organic matter in waters of the Kara Sea along the St. Anna Trough section
DOI: 10.1594/pangaea.739156
title: Pollen profile DABA8, Daba-Nur, Mongolia

description: The EPD (http://www.europeanpollendatabase.net) accepted species name is given in the parameter comment. This dataset was archived on 2010-05-11 from the EPD database.
DOI: 10.1594/pangaea.846609
title: Other measurements at 300 m from station Boulder (2014-12)
DOI: 10.1594/pangaea.762121
title: (Table 1) Vertical fluxes of sedimentary material at Station ST-RSh-1 in the Black Sea from January to May 1998
DOI: 10.1594/pangaea.848211
title: Radiosonde measurements from station Kwajalein (2013-03)
DOI: 10.1594/pangaea.853885
title: Basic measurements of radiation at station Kwajalein (2015-04)
DOI: 10.1594/pangaea.779525
title: (Table T1) Paleomagnetic properties of ODP Hole 191-1179D basalts

description: During Ocean Drilling Program Leg 191, ~100 m of mid-Cretaceous igneous crust was cored at Site 1179 (41.08°N, 159.96°E), located within magnetic Anomaly M8 on the abyssal plain of the northwest Pacific Ocean near Shatsky Rise. Paleomagnetic data from this section are significant because they can constrain the mid-Cretaceous Pacific plate paleolatitude and paleomagnetic pole, both of which can be used to infer tectonic drift and other geodynamic processes. In this study, we analyzed the paleomagnetism of 122 samples from 40 flows in the Site 1179 basalt section. Comparison of inclination data among flows implies 13 independent measurements of the paleomagnetic field. Assuming a reversed magnetic polarity because of the site location within Anomaly M8, the data give a mean paleocolatitude of 88.1° ± 6.8° (corresponding to a paleolatitude of 1.9°N). The paleocolatitude is consistent with other mid-Cretaceous Pacific paleomagnetic data that indicate ~39° northward drift of the western Pacific plate since mid-Cretaceous time. Comparison of observed between-flow colatitude variance with that expected from secular variation data suggests that secular variation may not have been completely averaged with the 13 independent groups sampled at Site 1179. Colatitude scatter in the section is markedly less in the deepest 33 m of the hole, indicating a shift from rapidly erupted flows in the bottom ~33 m of the section to more slowly emplaced flows above.
description: Supplement to: Sager, William W; Horner-Johnson, Benjamin C (2004): Paleomagnetism of basaltic rocks cored at ODP Site 1179: implications for mid-Cretaceous Pacific plate paleolatitude and paleomagnetic pole. In: Sager, WW; Kanazawa, T; Escutia, C (eds.) Proceedings of the Ocean Drilling Program, Scientific Results, College Station, TX (Ocean Drilling Program), 191, 1-20
DOI: 10.1594/pangaea.909070
title: Daily precipitation (1979-2018) at the Arctic meteorological station Hornsund, Spitsbergen
DOI: 10.1594/pangaea.719339
title: Radiosonde measurements from station Bondville (1998-02)

description: Version 2, 2009-06-15; Start location: Lincoln, IL; Distance from radiation site: 82 km; If launch time is exactly 00Z or 12Z, the actual launch time is likely unknown
DOI: 10.1594/pangaea.738501
title: (Table S2) Carbonate preservation data. Number of foraminiferal shells observed, percent benthic foraminifera (%BF) and percent planktic foraminiferal shell fragments (%PFF) within each sample from the PETM intervals of ODP Sites 1262 and 1263

description: Depth, sediment = core depth (corrected mcd; Röhl et al., 2007)
DOI: 10.1594/pangaea.707109
title: Basic and other measurements of radiation at station South Pole (2008-08)
DOI: 10.1594/pangaea.496081
title: Water temperature MBT profiles from cruise U90X089098M_1989
DOI: 10.1594/pangaea.742921
title: (Table 2) Carbonate-, organic carbon-, trace element contents and oxygen/carbon stable isotopes of authigenic carbonates at ODP Site 104-643
DOI: 10.1594/pangaea.909008
title: Annual mean cloudiness (1983-2018) at the Arctic meteorological station Hornsund, Spitsbergen

description: Observations of cloudiness at the Polish Polar Station in Hornsund are conducted by meteorologists and describe the predominant sky condition based upon octas (eighths) of the sky covered by opaque (not transparent) clouds.
DOI: 10.1594/pangaea.909013
title: Annual mean relative humidity (1983-2018) at the Arctic meteorological station Hornsund, Spitsbergen
DOI: 10.1594/pangaea.898585
title: CDOM, oxygen and bacterial abundance in the SML and ULW of a marine monocolture in the presence and absence of polystyrene microparticles

description: These data accompany the perspective paper "Plastic Accumulation in the Sea Surface Microlayer: An Experiment-Based Perspective for Future Studies" authored by L. Galgani and S. A. Loiselle. The data reflect the results obtained from a small pilot laboratory experiment used to support the hypothesis that plastic accumulation in the sea surface microlayer (SML) might have effects on organic matter cycling in the surface ocean. Bacterial abundance, chromophoric dissolved organic matter (CDOM), and oxygen concentrations were measured.
description: Supplement to: Galgani, Luisa; Loiselle, Steven Arthur (2019): Plastic Accumulation in the Sea Surface Microlayer: An Experiment-Based Perspective for Future Studies. Geosciences, 9(2), 66
DOI: 10.1594/pangaea.494831
title: Physical oceanography during cruise U58X001290C
DOI: 10.1594/pangaea.668160
title: Basic measurements of radiation at station Camborne (2001-05)
DOI: 10.1594/pangaea.917184
title: 1-Hz PPP displacements at GEONET station 1011 during the 2011 Tohoku Mw9.0 earthquake
DOI: 10.1594/pangaea.694665
title: Temperature, salinity, and concentration of dissolved oxygen in the water column of the Cretan Sea at Station AUGUST-1994-D4
DOI: 10.1594/pangaea.707110
title: Basic and other measurements of radiation at station South Pole (2008-09)
DOI: 10.1594/pangaea.721446
title: Ultra-violet measurements from station Fort Peck (1998-07)

description: Version 2, 2009-06-19. UV-b values were originally given in mW/m² and then erroneously imported in W/m² using the same numbers. The numbers have been corrected (divided by 1000) on 2017-02-03.
DOI: 10.1594/pangaea.784373
title: Laser profiles of sea ice surface roughness during POL-ICE 2007 field campaign from flight POL-ICE07_200703111214
DOI: 10.1594/pangaea.906581
title: Detailed information of Silene sunhangii occurrence points compiled for species distribution modeling

description: Silene sunhangii (Caryophyllaceae), a new species from China
DOI: 10.1594/pangaea.712356
title: (Table 1) Chlorine isotope values of marine pore waters from ODP Hole 131-808C

description: Cl data are from Gieskes et al. (1993), doi:10.2973/odp.proc.sr.131.133.1993
DOI: 10.1594/pangaea.751123
title: Meteorological observations during PEGASUS cruise from St. Maarten to Curaçao started at 1833-10-29
DOI: 10.1594/pangaea.677800
title: Ozone measurements from station South Pole (2001-01)
DOI: 10.1594/pangaea.822181
title: Meteorological measurements in the upper air at station Moscow Dolgoprudnii, 1949-01-01 to 1949-12-31, ERA-CLIM ID 4525
DOI: 10.1594/pangaea.824709
title: Carbonate analysis from IODP Hole 324-U1346A

description: Geocode = Top depth CSF-A (m)
DOI: 10.1594/pangaea.477468
title: Hydrochemistry measured on water bottle samples at station SAtl_1983_OC_10S/155

description: This data sets is part of a compilation by James Swift for the Java OceanAtlas software. Data are from various pre-WOCE sources, mainly with contributions and quality control from Joseph Reid (SIO) and NODC.
DOI: 10.1594/pangaea.708246
title: Basic measurements of radiation at station Carpentras (2006-10)