cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6702843
title: RMTable Consolidated Catalog of Faraday Rotation Measures of Astronomical Radio Sources

description: This is a catalog of Faraday rotation measures (and other related properties) of astronomical radio sources, consolidated from many published catalogs in the astronomical literature from 1980 to the present day. These catalogs have been converted to the RMTable standard and stored in 3 formats: FITS binary table, tab-seperated-value ASCII, and VOTable XML. These catalog files can be read by any suitable reader, but we have created a Python module, RMTable (https://github.com/CIRADA-Tools/RMTable), which streamlines the process of interacting with and creating new RMTables.
DOI: 10.5281/zenodo.6907975
title: RMTable Consolidated Catalog of Faraday Rotation Measures of Astronomical Radio Sources

description: This is a catalog of Faraday rotation measures (and other related properties) of astronomical radio sources, consolidated from many published catalogs in the astronomical literature from 1980 to the present day. These catalogs have been converted to the RMTable standard and stored in 3 formats: FITS binary table, tab-seperated-value ASCII, and VOTable XML. These catalog files can be read by any suitable reader, but we have created a Python module, RMTable (https://github.com/CIRADA-Tools/RMTable), which streamlines the process of interacting with and creating new RMTables.
DOI: 10.5517/ccdc.csd.cc2d21xg
title: CCDC 2206515: Experimental Crystal Structure Determination

description: Related Article: Qiongyao Chen, Xingsi Kang, Xuehua Zhang, Yanwei Cao, Lin He|2022|J.Org.Chem.|88|5044|doi:10.1021/acs.joc.2c02321
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d21yh
title: CCDC 2206516: Experimental Crystal Structure Determination

description: Related Article: Qiongyao Chen, Xingsi Kang, Xuehua Zhang, Yanwei Cao, Lin He|2022|J.Org.Chem.|88|5044|doi:10.1021/acs.joc.2c02321
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d21zj
title: CCDC 2206517: Experimental Crystal Structure Determination

description: Related Article: Qiongyao Chen, Xingsi Kang, Xuehua Zhang, Yanwei Cao, Lin He|2022|J.Org.Chem.|88|5044|doi:10.1021/acs.joc.2c02321
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d220l
title: CCDC 2206518: Experimental Crystal Structure Determination

description: Related Article: Qiongyao Chen, Xingsi Kang, Xuehua Zhang, Yanwei Cao, Lin He|2022|J.Org.Chem.|88|5044|doi:10.1021/acs.joc.2c02321
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22756940
title: E-leade rship and employee creativity the impact of regulatory focus-data.xlsx

description: Design/methodology/approach–A cross-sectional survey design with n =366 fulltime employed men and women, working for various organizations was selected.
DOI: 10.6084/m9.figshare.22756940.v1
title: E-leade rship and employee creativity the impact of regulatory focus-data.xlsx

description: Design/methodology/approach–A cross-sectional survey design with n =366 fulltime employed men and women, working for various organizations was selected.
DOI: 10.34740/kaggle/ds/3220330
title: US_Salary
DOI: 10.6084/m9.figshare.22730513
title: Structural Equation Model Test_output.doc

description: <strong>Structural Equation Model Test output fom SPSS AMOS</strong>
DOI: 10.6084/m9.figshare.22730513.v1
title: Structural Equation Model Test_output.doc

description: <strong>Structural Equation Model Test output fom SPSS AMOS</strong>
DOI: 10.5281/zenodo.7847780
title: analyze data for paper analyzes

description: The dataset is now continuing to be used in other related studies. If you want to use this dataset, please contact me in advance to prevent the study from being the same and obtain the right to use it. All users need to obtain the consent of the person or the corresponding author before using it.
DOI: 10.5281/zenodo.7847779
title: analyze data for paper analyzes

description: The dataset is now continuing to be used in other related studies. If you want to use this dataset, please contact me in advance to prevent the study from being the same and obtain the right to use it. All users need to obtain the consent of the person or the corresponding author before using it.
DOI: 10.6084/m9.figshare.22730468
title: Reliability and Validity output test E2).xls

description: The result of the calculation of the research model's reliability and validity.
DOI: 10.6084/m9.figshare.22730114
title: Questionnaire data_SPSS output.sav

description: Questionnaire data is ready to be processed with a data processing application
DOI: 10.6084/m9.figshare.22730114.v1
title: Questionnaire data_SPSS output.sav

description: Questionnaire data is ready to be processed with a data processing application
DOI: 10.6084/m9.figshare.22220857
title: Supplementary Material for: Aberrant Gut Microbiome Contributes to Barrier Dysfunction, Inflammation and Local Immune Responses in IgA Nephropathy

description: Introduction Numerous research have shown that serum Gal-deficient (Gd)-IgA1 levels are increased in IgA nephropathy (IgAN) patients and these levels are a dangerous risk factor for IgAN.It has been reported that a relationship between the gut microbiota and IgAN.Whether the gut microbiota participates in the pathogenesis of IgAN was still controversial. Methods We evaluated changes in the gut flora and the levels of Gd-IgA1 in IgAN patients and healthy controls (HCs). We investigated the Gd-IgA1 levels in both blood and urine specimens. C57BL/6 mice were given a broad-spectrum antibiotic cocktail to deplete the endogenous gut flora. We established a model of IgAN in pseudosterile mice and investigated the expression of the markers of intestinal permeability, inflammation, and local immune responses. Results Studies have shown that the levels of certain gut flora differ between IgAN patients and HCs. Moreover, elevated Gd-IgA1 levels were found in both the serum and urine. Interestingly, Coprococcus, Dorea, Bifidobacterium, Blautia and Lactococcus, selected from 10 candidate biomarkers to predict risk in IgAN patients according to random forest analysis, were inversely associated with urinary Gd-IgA1 levels. Notably, the urine level of Gd-IgA1 could best distinguish IgAN patients from HCs. Additionally, the degree of kidney damage in pseudosterile mice with IgAN was more severe than that in mice with IgAN. Furthermore, the markers of intestinal permeability were significantly elevated in pseudosterile IgAN mice. Moreover, the inflammation responses (TLR4, MyD88, and NF-κB in intestinal and renal tissues; TNF-α and IL-6 in serum) and Local Immune Responses (BAFF and APRIL in intestinal tissue) were upregulated in pseudosterile IgAN mice. Conclusions The urine Gd-IgA1 level may be as a biomarker for the early screening of potential IgAN, and Gut microbiota dysbiosis was demonstrated in IgAN, which might be involved the dysfunction of the mucosal barrier, inflammation and local Immune responses.
DOI: 10.6084/m9.figshare.22220857.v1
title: Supplementary Material for: Aberrant Gut Microbiome Contributes to Barrier Dysfunction, Inflammation and Local Immune Responses in IgA Nephropathy

description: Introduction Numerous research have shown that serum Gal-deficient (Gd)-IgA1 levels are increased in IgA nephropathy (IgAN) patients and these levels are a dangerous risk factor for IgAN.It has been reported that a relationship between the gut microbiota and IgAN.Whether the gut microbiota participates in the pathogenesis of IgAN was still controversial. Methods We evaluated changes in the gut flora and the levels of Gd-IgA1 in IgAN patients and healthy controls (HCs). We investigated the Gd-IgA1 levels in both blood and urine specimens. C57BL/6 mice were given a broad-spectrum antibiotic cocktail to deplete the endogenous gut flora. We established a model of IgAN in pseudosterile mice and investigated the expression of the markers of intestinal permeability, inflammation, and local immune responses. Results Studies have shown that the levels of certain gut flora differ between IgAN patients and HCs. Moreover, elevated Gd-IgA1 levels were found in both the serum and urine. Interestingly, Coprococcus, Dorea, Bifidobacterium, Blautia and Lactococcus, selected from 10 candidate biomarkers to predict risk in IgAN patients according to random forest analysis, were inversely associated with urinary Gd-IgA1 levels. Notably, the urine level of Gd-IgA1 could best distinguish IgAN patients from HCs. Additionally, the degree of kidney damage in pseudosterile mice with IgAN was more severe than that in mice with IgAN. Furthermore, the markers of intestinal permeability were significantly elevated in pseudosterile IgAN mice. Moreover, the inflammation responses (TLR4, MyD88, and NF-κB in intestinal and renal tissues; TNF-α and IL-6 in serum) and Local Immune Responses (BAFF and APRIL in intestinal tissue) were upregulated in pseudosterile IgAN mice. Conclusions The urine Gd-IgA1 level may be as a biomarker for the early screening of potential IgAN, and Gut microbiota dysbiosis was demonstrated in IgAN, which might be involved the dysfunction of the mucosal barrier, inflammation and local Immune responses.
DOI: 10.5281/zenodo.7893947
title: CLDF word list from Gerhard Köbler's "Gotisches Wörterbuch" (2014)

description: Cite the source of the dataset as: Köbler, Gerhard, ed. Gotisches Wörterbuch. Brill, 1989
DOI: 10.5281/zenodo.7893948
title: CLDF word list from Gerhard Köbler's "Gotisches Wörterbuch" (2014)

description: Cite the source of the dataset as: Köbler, Gerhard, ed. Gotisches Wörterbuch. Brill, 1989
DOI: 10.15151/esrf-es-1057333878
title: ITABAG: 3D structures of macromolecules related to human health

description: The ITABAG includes structural biologists from Universities, the National Research Council and Hospital research centres in Italy. The laboratories take advantage of single crystal and small angle X-ray diffraction methods to study the structure-function relationships in various macromolecules. A unifying factor for the vast majority of the macromolecules under study is that they are related to human health, either directly, being human proteins involved in some disease, or indirectly, as proteins expressed by human pathogens and validated as potential pharmacological targets. Other projects investigate basic chemical processes, such as crystal growth, or aim at characterising macromolecules with potential biotechnological applications.
DOI: 10.15151/esrf-es-1077513909
title: Universities of St. Andrews, Dundee, Glasgow, and Aberdeen

description: The Dundee/St Andrews/Glasgow/Aberdeen BAG research interests fall into two broad areas. Firstly, we use structural information to understand mechanisms of fundamental biological processes, protein engineering, enzymes, and biological chemistry. Secondly, we utilize structural insights to guide target selection and development of lead compounds for drug development. Fundamental insights obtained into biological processes are often closely coupled to target identification and development of tools, reagents, or inhibitors, which feed into a range of biomedical applications. Our research relies heavily on high quality, reliable and tunable synchrotron radiation, along with state-of-the-art optics, detectors, sample changers, and computation, to support determination of new structures, as well as collect high resolution diffraction data to provide the level of accuracy important in structure-guided drug design.
DOI: 10.15151/esrf-es-1163391258
title: The Israeli BAG

description: The Israeli BAG encompass most MX groups in Israel and is highly diverse and versatile in its scientific interests and convictions. In the last year some groups which are not regarded as genuine MX have been joining our BAG as users of the bioSAXS BM29 station adding to the diversity of the BAG. It is not straightforward to set descriptive summary that covers all the topics. A central theme in several BAG members could be regarded is molecular virology such as, the molecular basis for cell entry of viruses, from the Arenaviridae family of viruses, design of Vaccines against HVC by targeting HCV E2 envelope (Env) glycoprotein for neutralizing antibodies (nanobodies). The group of Rouvunski focuses on studying arthropod borne viruses (dengue, West Nile, Zika, Israel Turkey Meningoencephalitis) and recently coronaviruses (SARS-CoV-2, MERS, OC43) and their envelope proteins. On another approach we attempt to discover therapeutics against Chikungunya Virus by targeting the Clk1.
DOI: 10.15151/esrf-es-1190663461
title: Fe mapping and XANES on ceramic pieces

description: XANES mappng on ceramic pieces
DOI: 10.6084/m9.figshare.22758332
title: Dataset for the article in RPD (doi: 10.1093/rpd/ncad151)

description: This is a dataset which we used to prepare Fiugres 1 to 6 (except Figure 5) in the paper "Hydrogen transfer reactions via organic radicals in gamma-irradiated chibaite" by Yokoyama, Isogai, Kusuki, Tani, and Nishido in RPD. It is an 'Excel' file with 6 sheets. The followings are brief description for them. The detailed information is in the paper. <strong>#1 Figure 1</strong> ESR spectrum in Fig1-a and Fig1-b. <strong>#2 Figure 2a</strong> ESR spectrum in Fig2-a. <strong>#3 Figure 2b</strong> ESR spectrum in Fig2-b. <strong>#4 Figure 3</strong> Variation in the amounts of the organic radicals and hydrogen atoms in isothermal annealing experiments at 240 K. <strong>#5 Figure 4</strong> Variation in the amount of the <em>tert</em>-butyl radical (solid triangle) and the combined amount of ethyl and isopropyl radicals (solid square) in isothermal annealing experiments at 240 K. The open square in the upper part indicates the variation of the three organic radicals with the same conditions. <strong>#6 Figure 6</strong> Arrhenius plot of the decay of the total amount of ethyl and isopropyl radicals.
DOI: 10.6084/m9.figshare.22758332.v1
title: Dataset for the article in RPD (doi: 10.1093/rpd/ncad151)

description: This is a dataset which we used to prepare Fiugres 1 to 6 (except Figure 5) in the paper "Hydrogen transfer reactions via organic radicals in gamma-irradiated chibaite" by Yokoyama, Isogai, Kusuki, Tani, and Nishido in RPD. It is an 'Excel' file with 6 sheets. The followings are brief description for them. The detailed information is in the paper. <strong>#1 Figure 1</strong> ESR spectrum in Fig1-a and Fig1-b. <strong>#2 Figure 2a</strong> ESR spectrum in Fig2-a. <strong>#3 Figure 2b</strong> ESR spectrum in Fig2-b. <strong>#4 Figure 3</strong> Variation in the amounts of the organic radicals and hydrogen atoms in isothermal annealing experiments at 240 K. <strong>#5 Figure 4</strong> Variation in the amount of the <em>tert</em>-butyl radical (solid triangle) and the combined amount of ethyl and isopropyl radicals (solid square) in isothermal annealing experiments at 240 K. The open square in the upper part indicates the variation of the three organic radicals with the same conditions. <strong>#6 Figure 6</strong> Arrhenius plot of the decay of the total amount of ethyl and isopropyl radicals.
DOI: 10.34740/kaggle/dsv/5598158
title: Elon Musk Tweets
DOI: 10.5281/zenodo.7894620
title: Open data for "3D integration enables ultra-low-noise isolator-free lasers in Si photonics"

description: Open data for "3D integration enables ultra-low-noise isolator-free lasers in Si photonics"
DOI: 10.5281/zenodo.7894619
title: Open data for "3D integration enables ultra-low-noise isolator-free lasers in Si photonics"

description: Open data for "3D integration enables ultra-low-noise isolator-free lasers in Si photonics"
DOI: 10.6084/m9.figshare.22758375
title: In-silico identification of novel DDI2 inhibitor in glioblastoma <i>via</i> repurposing FDA approved drugs using molecular docking and MD simulation study

description: Glioblastoma, the most severe form of brain tumor and a leading cause of death within a year of diagnosis, is characterized by excessive protein synthesis and folding in the lumen of the endoplasmic reticulum (ER), leading to increased ER stress in the cells of GBM tissues. To mitigate this stress the cancer cells have intelligently adopted a plethora of response mechanisms and Unfolded Protein Response (UPR) is one of those. To bear with this exhaustive situation cells upregulate a strong protein degradation system in form of 26S proteasome and blocking of proteasomal gene synthesis may be a potential therapeutic action against GBM. Proteasomal gene synthesis is exclusively dependent on the transcription factor Nuclear respiratory factor 1 (NRF1) and its activating enzyme DNA damage inducible 1 homolog 2 (DDI2). Here in this study, we performed molecular docking against DDI2 with the 20 FDA-approved drugs and identified Alvimopan and Levocabastine as the top two compounds with the best binding score along with the standard drug Nelfinavir. MD simulation (100 ns) of these protein-ligand docked complexes reveals that the stability and compactness of Alvimopan are high in comparison with Nelfinavir. Our in-silico (Molecular docking and Molecular dynamics simulation) studies pointed out that Alvimopan may be repurposed as a DDI2 inhibitor and can be used as a potential anticancer agent for the treatment of brain tumors. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.22758375.v1
title: In-silico identification of novel DDI2 inhibitor in glioblastoma <i>via</i> repurposing FDA approved drugs using molecular docking and MD simulation study

description: Glioblastoma, the most severe form of brain tumor and a leading cause of death within a year of diagnosis, is characterized by excessive protein synthesis and folding in the lumen of the endoplasmic reticulum (ER), leading to increased ER stress in the cells of GBM tissues. To mitigate this stress the cancer cells have intelligently adopted a plethora of response mechanisms and Unfolded Protein Response (UPR) is one of those. To bear with this exhaustive situation cells upregulate a strong protein degradation system in form of 26S proteasome and blocking of proteasomal gene synthesis may be a potential therapeutic action against GBM. Proteasomal gene synthesis is exclusively dependent on the transcription factor Nuclear respiratory factor 1 (NRF1) and its activating enzyme DNA damage inducible 1 homolog 2 (DDI2). Here in this study, we performed molecular docking against DDI2 with the 20 FDA-approved drugs and identified Alvimopan and Levocabastine as the top two compounds with the best binding score along with the standard drug Nelfinavir. MD simulation (100 ns) of these protein-ligand docked complexes reveals that the stability and compactness of Alvimopan are high in comparison with Nelfinavir. Our in-silico (Molecular docking and Molecular dynamics simulation) studies pointed out that Alvimopan may be repurposed as a DDI2 inhibitor and can be used as a potential anticancer agent for the treatment of brain tumors. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.22317460.v1
title: Supplementary Material for: Risk of psychiatric disorders in patients with psoriasis prescribed acitretin versus disease-modifying antirheumatic drugs: a nationwide matched cohort study

description: Background: Acitretin has been linked to the development of psychiatric disturbance. Objectives: To assess the psychiatric hazards in patients with psoriasis prescribed acitretin compared with those prescribed disease-modifying antirheumatic drugs (DMARDs). Methods: This is a nationwide matched cohort study. From Taiwan’s National Health Insurance Research Database, Adult patients with psoriasis between 1997 and 2013 were screened. Patients prescribed acitretin for at least 30 days per year on average (acitretin cohort) were matched 1:2 with those prescribed DMARDs for at least 30 days per year on average (reference cohort), by means of age, gender, and psoriasis duration. Patients prescribed medication of the corresponding cohort for more than 7 days during the observation period were excluded. Cumulative incidences of psychiatric disorders in both cohorts were plotted with the Kaplan-Meier method. The modified Cox regression models were constructed to estimate hazard ratios (HRs). Results: In total, 1,152 and 2,304 patients in the acitretin and the reference cohort, respectively, were included. The 4-year cumulative incidence of overall psychiatric disorders (19.62% vs. 12.06%; p&lt;.001), mood disorders (12.81% vs. 7.67%; p&lt;.001), and psychosis (7.21% vs. 4.63%; p&lt;.001) in the acitretin cohort were significantly higher than those in the reference cohort. Acitretin was independently associated with psychiatric disorders (HR 1.51, 95% confidence interval [CI] 1.23-1.85). The risk is more accentuated in the subgroups of comorbid chronic liver disease (HR 2.60, 95% CI 1.56-4.33) or psoriatic arthritis (HR 3.23, 95% CI 1.75-5.97). Other independent risk factors included insomnia, acute coronary syndrome, females, and age. Conclusions: Compared with disease-modifying antirheumatic drugs, acitretin was associated with higher hazards of psychiatric disorders among psoriasis patients.
DOI: 10.5517/ccdc.csd.cc1p4pcw
title: CCDC 1553638: Experimental Crystal Structure Determination

description: Related Article: Jiyuan Du, Shilong Wei, Zhijie Jiang, Hongshan Ke, Lin Sun, Yiquan Zhang, Sanping Chen|2023|Phys.Chem.Chem.Phys.(PCCP)|25|11717|doi:10.1039/D2CP06074D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d57b5
title: CCDC 2209566: Experimental Crystal Structure Determination

description: Related Article: Thanh Nhan Nguyen, Anh Ngoc Nguyen, Ngoc Minh Tran, In-Hyeok Park, Hyojong Yoo|2023|IUCrJ|10|321|doi:10.1107/S2052252523002385
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13131/unipi/asp8-hm42
title: A dataset for 3D reconstruction of centrally planned buildings from the Roman and Late Antique periods