cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21325224.v1
title: Supplementary Material for: Symptom-Based Risk Factors for Retinal Tears and Detachments in Suspected Posterior Vitreous Detachment

description: Introductions: To determine symptom-level risk factors for retinal tear/ retinal detachment (RT/RD) in our patients presenting with symptoms of posterior vitreous detachment (PVD). Methods: We conducted a prospective cohort study of patients presenting to outpatient ophthalmology clinics at a single academic institution with complaint(s) of flashes, floaters and/or subjective field loss (SFL). Patients received a standardized questionnaire regarding past ocular history and symptom characteristics including number, duration and timing of flashes, and floaters, prior to dilated ocular examination. Final diagnosis was categorized as RT/RD, PVD, ocular migraine, vitreous syneresis, or “other”. Simple and multivariate logistic regression were used to identify symptoms predictive of various pathologies. Results: We recruited 237 patients (age 20 - 93 years) from 3/2018 to 3/2019. The most common diagnosis was PVD (141, 59.5%), followed by vitreous syneresis (38, 16.0%) and RT/RD (34, 14.3%). Of those with RT/RD, 16 (47.1%) had retinal tear and 15 (44.1%) had RD. Significant differences in demographic and examination-based factors were observed between these groups. Symptom-based predictive factors for RT/RD were the presence of subjective visual reduction (SVR; OR 2.77, p = 0.03) or SFL (OR 2.47, p = 0.04), and the absence of either floaters (OR 4.26, p = 0.04) or flashes (OR 2.95, p = 0.009). The number, duration and timing of flashes and floaters did not predict the presence of RT/RD in our cohort. Within the RT/RD group, patients with RT were more likely to report floaters (100% vs. 66.7%, p = 0.018) and less likely to report SFL (0% vs. 86.7%, p &lt; 0.001) compared to those with RD. Conclusion: While well-known demographic and exam-based risk factors for RT/ RD exist in patients with PVD symptoms, the relative importance of symptom characteristics is less clear. We found the presence of SVR and SFL, as well as the absence of either flashes or floaters, predicts RT/RD in patients with PVD symptoms. However, the number, duration, and timing of flashes and floaters may be less relevant in the triage of these patients.
DOI: 10.6084/m9.figshare.21563697.v1
title: Supplementary Material for: Anti-vascular endothelial growth factor treatment compared with steroid treatment for retinal vein occlusion: a meta-analysis

description: Background: This meta-analysis aims to compare the efficacy and safety of intravitreal anti-vascular endothelial growth factor (anti-VEGF) agents and intravitreal steroids for the treatment of macular edema (ME) secondary to retinal vein occlusion (RVO). Methods: A systematic literature search was conducted on Ovid MEDLINE, EMBASE, and the Cochrane Controlled Register of Trials for studies published between January 2005 and November 2021. Randomized controlled trials (RCTs) reporting on patients with ME secondary to RVO who were treated with intravitreal steroids or anti-VEGF agents were included. A random effects meta-analysis was performed. Results: 867 eyes from 11 RCTs were included. At last study observation, intravitreal anti-VEGF agents were associated with a significantly better BCVA (WMD=-0.14 logMAR, 95% CI=[-0.19,-0.09], p&lt;0.00001) and lower retinal thickness (WMD=-38.01 µm, 95% CI=[-56.17,-19.85], p&lt;0.0001) relative to intravitreal steroids. Similar findings were found at 3-12 month timepoints. Intravitreal anti-VEGF agents were associated with a significantly lower incidence of IOP-related adverse events (RR=0.28, 95% CI=[0.15,0.51], p&lt;0.0001), cataract development/progression (RR=0.22, 95% CI=[0.09,0.49], p=0.0003) and conjunctival hemorrhage (RR=0.52, 95% CI=[0.32,0.86], p=0.01). Conclusion: Our meta-analysis found superiority of intravitreal anti-VEGF agents relative to intravitreal steroids for the treatment of ME secondary to RVO with regards to visual acuity, anatomic outcomes, and safety endpoints.
DOI: 10.6084/m9.figshare.21763301.v1
title: Supplementary Material for: Feasibility of Modified Endobronchial Ultrasound-Guided Intranodal Forceps Biopsy: A Retrospective Analysis

description: <b><i>Background:</i></b> Endobronchial ultrasound (EBUS)-guided intranodal forceps biopsy (IFB), a diagnostic bronchoscopic technique for intrathoracic lymphadenopathy, is performed following EBUS-guided transbronchial needle aspiration (TBNA). The current EBUS-IFB technique is complex and provides small sample volumes. We modified this technique to allow the use of standard-sized forceps. <b><i>Objectives:</i></b> The aim of this study was to assess the feasibility of the modified EBUS-IFB technique, which combines standard-sized forceps with standard EBUS-TBNA equipment. <b><i>Method:</i></b> This retrospective analysis included consecutive patients scheduled for EBUS-TBNA with attempted additional IFB between July 2020 and March 2021. The feasibility indices of IFB, technical success rate, diagnostic accuracy, and major complications were retrospectively investigated. We performed semi-quantitative evaluation of the histological specimens and univariable analyses to identify factors associated with IFB failure. <b><i>Results:</i></b> During the study period, 295 patients underwent 307 EBUS-TBNAs; 195 cases were included in the analyses. Target lesions were mainly mediastinal lymph nodes (134 cases, 68.7%); the most frequent sites were #7 (61 cases) and #4R (50 cases). The median lesion size was 16.1 mm, the technical IFB success rate was 90.8%, and the diagnostic accuracy of the TBNA and IFB combination was 99.5%. One patient was lost to follow-up. Univariable analyses did not identify any factors involved in technical IFB failure. Major complications of pneumonia and pneumothorax occurred in 2 cases (1.0%). The median histological score was significantly higher in the IFB group than in the TBNA group (1.67 vs. 1.50, <i>p</i> = 0.032). <b><i>Conclusions:</i></b> Modified EBUS-IFB, combining standard-sized forceps with common EBUS-TBNA equipment, is feasible with few major complications.
DOI: 10.5258/soton/d2227
title: Dataset for the Southampton doctoral thesis: Computational Modelling of Particle Tribocharging in Small, High-Speed Cyclones

description: Dataset supports the thesis: Computational Modelling of Particle Tribocharging in Small, High-Speed Cyclones. DESCRIPTION OF THE DATA Various python scripts and a C source file for Lagrangian particle tracking and the Eulerian particle model. Python code written in Python 3 and uses standard modules from an Anaconda package installation. This dataset contains: 2dtg_particles.py - A python script for Lagrangian particle tracking in a 2d Taylor-Green flow field. brownian_motion.py - A python script validating a Brownian motion particle model against an analytical solution. cash_rk45.py - A python script containing an embedded Runga-Kutta 4/5 scheme. cunningham_slip.py - A python script which computes the Cunningham Slip Correction Factor for a spherical particle. fvm_2d.py - A python script containing a 2D finite-volume method solver for the Eulerian particle model in a 2D Talor-Green flow field. hertzian.c - A C file which calculates the trajectories of 2 particles colliding assuming a Hertzian collision. hertzian_integral.py - A python script which numerically evaluates the Hertzian integral. rankine_vortex.py - A python script which computes and plots an ideal Rankine vortex. source_sympy.py - A python script which uses symbolic algebra to check the source term maths is correct. test_fvm_2d.py - A python script containing unit tests for fvm_2d.py. test_hertzian.py - A python script containing tests for hertzian.c.
DOI: 10.6084/m9.figshare.21408171
title: Supplementary Material for: Natural age-related slow-wave sleep alterations onset prematurely in the Tg2576 mouse model of Alzheimer’s disease

description: Introduction: Sleep insufficiency or decreased quality have been associated with Alzheimer’s disease (AD) already in its preclinical stages. Whether such traits are also present in rodent models of the disease has been poorly addressed, somewhat disabling the preclinical exploration of sleep-based therapeutic interventions for AD. Methods: We investigated age-dependent sleep-wake phenotype of a widely used mouse model of AD, the Tg2576 line. We implanted electroencephalography/ electromyography headpieces into 6 months old (plaque-free, n=10) and 11 months old (moderate plaque-burdened, n=10) Tg2576 and age-matched wild-type (WT, 6 month old n =10, 11 month old n =10) mice and recorded vigilance states for 24 hours. Results: Tg2576 mice exhibited significantly increased wakefulness and decreased non-rapid eye movement sleep over a 24-hour period compared to WT mice at 6, but not at 11 months of age. Concomitantly, power in the delta frequency was decreased in 6-month old Tg2576 mice in comparison to age-matched WT controls, rendering a reduced slow-wave energy phenotype in the young mutants. Lack of genotype-related differences over 24 hours in overall sleep-wake phenotype at 11 months of age appears to be the result of changes in sleep-wake characteristics accompanying the healthy aging of WT mice. Discussion/Conclusion: Therefore, our results indicate that at plaque-free disease stage, diminished sleep quality is present in Tg2576 mice which resembles aged healthy controls, suggesting an early-onset of sleep-wake deterioration in murine AD. Whether such disturbances in the natural patterns of sleep could in turn worsen disease progression warrants further exploration.
DOI: 10.34740/kaggle/dsv/4753465
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.12834803
title: Oort cloud Ecology II: Extra-solar Oort clouds and the origin of asteroidal interloopers

description: # Data files for reproducing the figures in the paper: <br># Extra-solar Oort clouds and the origin of asteroidal interloopers<br># by Simon Portegies Zwart<br><br><br># directories<br> * scr<br> * data<br> * N1k<br> Data files on the orbit of the star #id (Gaia number ordered with <br> respect to the distance to the Sun).<br> * gaia_star_1<br> * starplanets_and_comets.amuse # initial file containing star, <br> planets and asteroids at 1 Gyr ago. In fact, this file is the <br> equivalent of star_content_i0000.amuse<br> * star_content_i0001.amuse # 995 Myr ago<br> * star_content_i0002.amuse <br> * ...<br> * star_content_i0201.amuse # Current epoch<br> * ...<br> * star_content_i0221.amuse # 100 Myr into the future<br> * gaia_star_2<br> * gaia_star_3<br> * ...<br> * gaia_star_199<br> * Sun<br> Data on the last Gyr orbital evolution of the Sun in the Galactic potential<br><br>
DOI: 10.6084/m9.figshare.21763334.v1
title: Supplementary Material for: Eosinophilic Colitis, an Uncommon Cause of Diarrhea: Case Report and Literature Review

description: Eosinophilic colitis and hypereosinophilic syndrome with colic involvement are rare diagnosis that are characterized by wide-ranging gastrointestinal symptoms and idiopathic infiltration of eosinophils in the colon. The diagnostic workup is challenging since there are no standardized criteria. We report a case of a man admitted to the hospital with a history of nonbloody chronic diarrhea. The detailed workup demonstrated blood eosinophilia, and the colonic biopsies revealed extensive eosinophilic infiltration. He was treated with steroids with clinical and analytical improvement. Due to relapsing colitis after therapy withdrawal, he was chronically medicated with 10 mg of prednisolone with ultimate symptom control. This case report describes the diagnostic workup and highlights the most important features of this often underdiagnosed entity.
DOI: 10.5281/zenodo.7467653
title: Code and data for paper 'Silent Compiler Bug De-duplication via Three-Dimensional Analysis'

description: Code and data for paper 'Silent Compiler Bug De-duplication via Three-Dimensional Analysis'
DOI: 10.5281/zenodo.7467652
title: Code and data for paper 'Silent Compiler Bug De-duplication via Three-Dimensional Analysis'

description: Code and data for paper 'Silent Compiler Bug De-duplication via Three-Dimensional Analysis'
DOI: 10.15470/ohymvn
title: Checklist of terrestrial beetles (Arthropoda, Insecta, Coleoptera) associated with agroecosystems in North-West Morocco

description: Beetles play an important role in agrosystems as bioindicators of quality, ecology, conservation, and soil characteristics. The Coleoptera of agrosystems in Morocco are poorly known. To contribute to the knowledge of beetles in this country we conducted a survey in a region of North-West Morocco between 2019 and 2020. The inventory was carried out using several types of traps. We identified 54 species belonging to 14 families, 20 subfamilies, and 18 tribes. The most abundant family was Carabidae, with 24 species, and the most dominant subfamily was Harpalinae, with 19 species. This work provides the first checklist of coleopteran fauna associated with agrosystems in North-West Morocco. We provide an identification key of subfamily and tribe, and update information on the distribution of the beetles identified.
DOI: 10.6084/m9.figshare.20494944
title: axial winds and waves on sediment transport

description: Data used in the submitted manuscript (Marine Geology)
DOI: 10.6084/m9.figshare.20494944.v3
title: axial winds and waves on sediment transport

description: Data used in the submitted manuscript (Marine Geology)
DOI: 10.6084/m9.figshare.20494944.v2
title: axial winds and waves on sediment transport

description: Data used in the submitted manuscript (Marine Geology)
DOI: 10.26050/wdcc/rcm_cmip6_historical-lr
title: CMIP6 CMIP MPI-ESM1-2-LR historical - RCM-forcing data

description: Project: RCM forcing data from MPI-ESM1-2 (ECHAM6/JSBACH/MPIOM/HAMOCC) CMIP6 experiments - This project provides variables from MPI-ESM1-2-HR CMIP6 experiments performed by DKRZ, MPI-M and DWD in the context of the BMBF funded CMIP6 DICAD project (FKZ 01LP1605A) and from MPI-ESM1-2-LR CMIP6 experiments performed by the Universität Hamburg and DKRZ, with the aim to benefit from the updated MPI-ESM model and the CMIP6 forcings in the context of the grand ensemble studies of the Universität Hamburg and the MPI-M. The experiments are described at https://www.wcrp-climate.org/wgcm-cmip/wgcm-cmip6 . Essential variables for regional climate modelling (RCM) are available. They are stored in native GRIB-format (e.g. spectral). For each experiment-member five datasets are provided. They are of frequency 6hrPt (= instantaneous six hourly) and fx (time invariant). ua and va have to be calculated from divergence and vorticity (e.g. with 'cdo dv2uv ...'). Spectral to gridpoint transformation can be done with 'cdo sp2gp ...'. The CMIP6 experiments have been performed with various model versions of MPI-ESM1-2: - LR: MPI-ESM1-2-LR - T63L47 (192 x 96 gridpoints; 47 vertical layers) for ECHAM6/JSBACH and GR15 (ca. 1.5 deg) of MPIOM/HAMOCC. - HR: MPI-ESM1-2-HR - T127L95 (384 x 192 gridpoints; 95 vertical layers) for ECHAM6/JSBACH and TP04 (tripolar grid, ca. 0.4 deg) of MPIOM/HAMOCC. CMIP6 ensemble members are named 'rNiNpNfN': rN is the realisation, iN is the initialisation method, pN stands for the parameterization or physics variant and fN stands for the forcing variant of the experiment. Different experiment realisations (rN) differ with respect to their restart files. The additional simulation output that is provided here as RCM forcing is (ONLY) available for the following simulations: - MPI-ESM1-2-HR: amip: r1i1p1f1 - r3i1p1f1 ssp126, ssp245, ssp370, ssp585: r1i1p1f1 - r10i1p1f1 - MPI-ESM1-2-LR: historical, ssp119, ssp126, ssp245, ssp370, ssp585: r11i1p1f1 - r30i1p1f1 Summary: RCM forcing data from the 20 realisations (r11i1p1f1-r30i1p1f1) of the CMIP6 experiment historical, conducted with the MPI-ESM1-2-LR on the Mistral supercomputer of the DKRZ. The experiment covers the years 1850 to 2014 and branches from the CMIP6 piControl experiment. The file format is gzip-compressed GRIB (*.grb.gz). CMIP6 website: https://www.wcrp-climate.org/wgcm-cmip/wgcm-cmip6 CMIP6 paper: https://doi.org/10.5194/gmd-9-1937-2016 Experiment description historical: Simulation of recent past (1850 to 2014). Impose changing conditions (consistent with observations). Should be initialised from a point early enough in the pre-industrial control run to ensure that the end of all the perturbed runs branching from the end of this historical run end before the end of the control. Only one ensemble member is requested but modelling groups are strongly encouraged to submit at least three ensemble members of their CMIP historical simulation.
DOI: 10.23728/fmi-b2share.f0e1edcba3764357b72028f4babb9c09
title: Repository for the paper: Comparison of physically based and empirical modelling of urban heat island during a heatwave

description: This repository contains modeled temperatures for the 2018 July heatwave, used in the paper titled " Comparison of physically based and empirical modelling of urban heat island during a heatwave" HERC151_2507_3107_UTC0_006_turku_temp_level_2.grib contains 2 m temperatures at 750 m resolution modeled with the numerical weather prediction model HARMONIE-AROME, for 25.7.-31.7.2018 at 0:00 UTC+0. The modeled area contains the city of Turku and surrounding areas. Data_used_in_TURCLIM_model_calibration_and_spatialisation.xlsx contains data used in calibration and spatialisation of the multiple linear regression model called TURCLIM. TURCLIM_model_temperatures_250718_to_310718_2am_100m_resolution.xlsx contains temperatures at 100 m resolution modeled with the multiple linear regression model called TURCLIM , for 25.7.-31.7.2018 at 2am local normal time (0:00 UTC+0.) The modeled area contains the city of Turku and surrounding areas.
DOI: 10.25505/fiz.icsd.cc29bk5d
title: CSD 2125303: Experimental Crystal Structure Determination

description: Related Article: M. Wildner, B.A. Zakharov, N.E. Bogdanov, D. Talla, E.V. Boldyreva, R. Miletich|2022|IUCrJ|9|194|doi:10.1107/S2052252521012720
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17917/c7cc7k
title: Lung Nodule Interval Change Challenge Document

description: This challenge evaluates difference in lung nodule size (and volume) estimations using automated (or semi automated) segmentation methods across institutions and user algorithms. We provide 100 cases with nodules curated from the NLST.
DOI: 10.17917/c7wc77
title: ITCR_Tools_All

description: ITCR resources
DOI: 10.17917/c7z59j
title: Just some Stats.....
DOI: 10.17917/c78g69
title: Round Robin 1 Data Sets

description: Here you can find the data for Round Robin (Interlaboratory) Study #1 (Nozzle).
DOI: 10.17917/c7d59k
title: Round Robin 1 Data Sets
DOI: 10.17917/c7h59h
title: Lung Nodule Interval Change Challenge Document
DOI: 10.5281/zenodo.7467855
title: Raw data for the article "Impedance spectroscopy analysis of a thermo-electrochemical cell under operating conditions"

description: Data used for the plots of the article: S. Castro-Ruiz and J. García-Cañadas, "Impedance Spectroscopy Analysis of a Thermo-Electrochemical Cell Under Operating Conditions," <em>2022 International Workshop on Impedance Spectroscopy (IWIS)</em>, 2022, pp. 25-27, doi: 10.1109/IWIS57888.2022.9975126.
DOI: 10.5281/zenodo.7467854
title: Raw data for the article "Impedance spectroscopy analysis of a thermo-electrochemical cell under operating conditions"

description: Data used for the plots of the article: S. Castro-Ruiz and J. García-Cañadas, "Impedance Spectroscopy Analysis of a Thermo-Electrochemical Cell Under Operating Conditions," <em>2022 International Workshop on Impedance Spectroscopy (IWIS)</em>, 2022, pp. 25-27, doi: 10.1109/IWIS57888.2022.9975126.
DOI: 10.17917/yr13-py25
title: A multi-modal data resource for investigating geographic heterogeneity in patient-derived xenograft tumors
DOI: 10.17917/9zhh-4b57
title: HINTS 5 Cycle 2

description: This is the data from the HINTS 5 Cycle 2
DOI: 10.17917/gjwn-3214
title: Hints 5 Cycle 2

description: Data collection for Cycle 2 of HINTS 5 began in January 2018 and concluded in May 2018.
DOI: 10.17917/gt41-ab48
title: Hints 5 Cycle 2.1

description: This is the Hints 5 Cycle 2
DOI: 10.17917/jnfg-t497
title: HINTS 5, Cycle 2 Dataset

description: HINTS 5, Cycle 2 (2018) data were collected from Jan through May, 2018. Sample design consisted of a single-mode mail survey, using the Next Birthday Method for respondent selection. Complete data were collected from 3,504 respondents.
DOI: 10.17917/trw8-mj04
title: HINTS 5 Cycle 2 11.27

description: this is for the hints 5 cycle 2 11/27
DOI: 10.17917/kpbc-ax38
title: Supplementals-for-ISBI2018Challenge _Paper_in_IEEE-TMI

description: The ISBI 2018 Lung Nodule Malignancy Prediction Challenge, developed by a team from the Quantitative Imaging Network of the NCI, was focused on the prediction of lung nodule malignancy from two sequential LDCT screening exams. See main paper for...
DOI: 10.17917/sngp-fq26
title: SEER-CAHPS User Guide

description: This user guide provides researchers with a compilation of guidance and information on the SEER-CAHPS data resource.
DOI: 10.17917/x6gj-xr09
title: HTAN Image Collection
DOI: 10.17632/c29vkmx2y2.1
title: Dataset on crude oil prices and sustainability indices of the USA and India

description: Data series employed in this study include 2197 daily observations of crude oil price, sustainability benchmark indices of the United States, and India for the period 2011-2019 daily. The crude oil prices (Brent crude in US dollars per barrel) are collected from the website of the U.S. Energy Information Administration (www.eia.gov). The Indian sustainability benchmark index is S&P BSE-Carbonex, and the Dow Jones Sustainability Index (DJSI), the US benchmark index for sustainability. The closing values of India and the US's sustainability indices are collected from the Bombay Stock Exchange (BSE) and S&P Global websites. The S&P BSE Carbonex index is intended to provide equity investors an opportunity to mitigate the climate change-related risks connected to their investments in the long run. It is based on S&P BSE 100 weights compared to the companies' carbon performance (level of greenhouse gas emissions). DJSI-US, the United States' sustainability index, has 126 constituents and ensures the investment option in U.S securities that applies sustainability practices (BSE, 2014; S&P Global, 2021).
DOI: 10.17632/c29vkmx2y2.2
title: Dataset on crude oil prices and sustainability indices of the USA and India

description: Data series employed in this study include 2197 daily observations of crude oil price, sustainability benchmark indices of the United States, and India for the period 2011-2019 daily. The crude oil prices (Brent crude in US dollars per barrel) are collected from the website of the U.S. Energy Information Administration (www.eia.gov). The Indian sustainability benchmark index is S&P BSE-Carbonex, and the Dow Jones Sustainability Index (DJSI), the US benchmark index for sustainability. The closing values of India and the US's sustainability indices are collected from the Bombay Stock Exchange (BSE) and S&P Global websites. The S&P BSE Carbonex index is intended to provide equity investors an opportunity to mitigate the climate change-related risks connected to their investments in the long run. It is based on S&P BSE 100 weights compared to the companies' carbon performance (level of greenhouse gas emissions). DJSI-US, the United States' sustainability index, has 126 constituents and ensures the investment option in U.S securities that applies sustainability practices (BSE, 2014; S&P Global, 2021).
DOI: 10.17632/x4cpyrd3rw.1
title: Original WB images lee et al Dev Cell

description: Immunoblotting data original scan.