cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4530667
title: Datasets for the Carpentry-style RNA-seq lesson

description: <strong>Lesson files</strong> File descriptions:<br> - <strong>counts.txt</strong>: a dataframe of the sample raw counts. It is a tab separated file therefore data are in tabulated separated columns.<br> - <strong>experimental_design_modified.txt</strong> dataframe indicates the correspondence between samples and experimental conditions (e.g. control, treated). <br> - <strong>differential_genes.tsv</strong> dataframe contains the result of the DESeq2 analysis. The counts.txt file was obtained by running the `v0.1.1` version of a RNA-Seq bioinformatic pipeline on the mRNA-Seq sequencing files from Vogel et al. (2016): https://www.ebi.ac.uk/ena/data/view/PRJEB13938. Please read the original study (Vogel et al. 2016): https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.14036 ==== <strong>Project files</strong> The NASA GeneLab experiment GLDS-38 performed transcriptomics and proteomics of Arabidopsis seedlings in microgravity by sending seedlings to the International Space Station (ISS). The raw counts, scaled counts and sample to conditions files are available in the ZIP archive
DOI: 10.17632/2xr9z2wzjt.1
title: Data for: Seawater versus mantle sources of mercury in sulfide-rich seafloor hydrothermal systems, Southwest Indian Ridge

description: mercury isotope compositions of seawater and marine sediments
DOI: 10.17632/tbt6v27p9c.1
title: Data for: Seawater versus mantle sources of mercury in sulfide-rich seafloor hydrothermal systems, Southwest Indian Ridge
DOI: 10.5517/ccdc.csd.cc270qff
title: CCDC 2056274: Experimental Crystal Structure Determination

description: Related Article: K.M. Carsch, W. Ho, K.H. Lui, G. Valtierra, D.K. Dogutan, D.G. Nocera, S.-L. Zheng|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|171|doi:10.1107/S2056989021000542
DOI: 10.5517/ccdc.csd.cc26nspc
title: CCDC 2045773: Experimental Crystal Structure Determination

description: Related Article: M.L. Nisbet, K.R. Poeppelmeier|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|165|doi:10.1107/S2056989021000645
DOI: 10.5517/ccdc.csd.cc26nsqd
title: CCDC 2045774: Experimental Crystal Structure Determination

description: Related Article: M.L. Nisbet, K.R. Poeppelmeier|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|165|doi:10.1107/S2056989021000645
DOI: 10.5517/ccdc.csd.cc26nsrf
title: CCDC 2045775: Experimental Crystal Structure Determination

description: Related Article: M.L. Nisbet, K.R. Poeppelmeier|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|165|doi:10.1107/S2056989021000645
DOI: 10.5517/ccdc.csd.cc26nssg
title: CCDC 2045776: Experimental Crystal Structure Determination

description: Related Article: M.L. Nisbet, K.R. Poeppelmeier|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|165|doi:10.1107/S2056989021000645
DOI: 10.5517/ccdc.csd.cc271vv0
title: CCDC 2057372: Experimental Crystal Structure Determination

description: Related Article: H. Iitsuka, K. Li, M. Kobayashi, K. Iida, N. Yonezawa, A. Okamoto|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|175|doi:10.1107/S2056989021000669
DOI: 10.5517/ccdc.csd.cc27208m
title: CCDC 2057509: Experimental Crystal Structure Determination

description: Related Article: H. Detert, D. Schollmeyer|2021|IUCrData|6|x210069|doi:10.1107/S2414314621000699
DOI: 10.5517/ccdc.csd.cc2727wg
title: CCDC 2057745: Experimental Crystal Structure Determination

description: Related Article: K. Breitwieser, P. Chen|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|180|doi:10.1107/S2056989021000712
DOI: 10.5287/bodleian:9rpzgpgm5
title: Bath_et_al - data for 'Sex ratio and the evolution of aggression in fruit flies'
DOI: 10.15468/pgt9gg
title: Description of Marolia alicantina sp. nov. (Coleoptera: Melandryidae) from Spain and new distribution records of Marolia species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Konvička, Ondřej, Brustel, Hervé (2021): Description of Marolia alicantina sp. nov. (Coleoptera: Melandryidae) from Spain and new distribution records of Marolia species. Zootaxa 4920 (3): 407-416, DOI: https://doi.org/10.11646/zootaxa.4920.3.6
DOI: 10.25318/4510003201-eng
title: Donor rate and average annual donations, by gender

description: Donor rate and distribution of average annual donations, for the population aged 15 and over, by gender, Canada and provinces.
DOI: 10.25318/4510003201-fra
title: Taux de donateurs et montant moyen des dons annuels, selon le genre

description: Taux de donateurs et répartition du montant moyen des dons annuels, pour les personnes âgées de 15 ans et plus, selon le genre, Canada et provinces.
DOI: 10.5519/qd.lf5xqf0o
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3504 records)
DOI: 10.15468/6x2rae
title: A new genus of Podoscirtini with one new species from Guangxi, China (Orthoptera: Gryllidae; Podoscirtinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Zhixin, He, Tao, Zhang, Weiliang, Xie, Li, Lin, Libin, Ma (2021): A new genus of Podoscirtini with one new species from Guangxi, China (Orthoptera: Gryllidae; Podoscirtinae). Zootaxa 4920 (3): 445-450, DOI: https://doi.org/10.11646/zootaxa.4920.3.10
DOI: 10.18430/m37l9r
title: X-ray diffraction data for the crystal Structure of a putative deoxyhypusine synthase from Entamoeba histolytica (7L9R)
DOI: 10.18430/m37l9u
title: X-ray diffraction data for the crystal Structure of S-adenosylmethionine-dependent methyltransferase UmaA from Mycobacterium tuberculosis in complex with a 12-mer PEG (7L9U)
DOI: 10.5281/zenodo.4529852
title: Dataset of patient-derived 3D digital breast phantoms for research in breast computed tomography

description: The dataset includes computational digital breast phantoms derived from high-resolution 3D clinical breast images for the use in virtual clinical trials in 3D X-ray breast imaging. Uncompressed computational breast phantoms for investigations in dedicated breast CT (BCT) were derived from 150 clinical 3D breast images acquired via a dedicated CT scanner at UC Davis (California, USA). All patient studies were performed according to protocols approved by the UC Davis institutional review board and Radiation Use Committee; informed consent was obtained. Each image voxel was classified in one out of the four main materials presented in the field of view: fibro-glandular tissue, adipose tissue, skin tissue and air. Each of the classified materials is represented by one out of four values: 0 for the air, 1 for the adipose tissue, 2 for the glandular tissue and 3 for the skin tissue. For the image classification, a semi-automatic software was adopted.
DOI: 10.5281/zenodo.4529851
title: Dataset of patient-derived 3D digital breast phantoms for research in breast computed tomography

description: The dataset includes computational digital breast phantoms derived from high-resolution 3D clinical breast images for the use in virtual clinical trials in 3D X-ray breast imaging. Uncompressed computational breast phantoms for investigations in dedicated breast CT (BCT) were derived from 150 clinical 3D breast images acquired via a dedicated CT scanner at UC Davis (California, USA). All patient studies were performed according to protocols approved by the UC Davis institutional review board and Radiation Use Committee; informed consent was obtained. Each image voxel was classified in one out of the four main materials presented in the field of view: fibro-glandular tissue, adipose tissue, skin tissue and air. Each of the classified materials is represented by one out of four values: 0 for the air, 1 for the adipose tissue, 2 for the glandular tissue and 3 for the skin tissue. For the image classification, a semi-automatic software was adopted.
DOI: 10.17632/6hbgchfynk.1
title: Data for: Shocked titanite records Chicxulub hydrothermal alteration and impact age

description: LA-ICPMS data for titanite as a Microsoft Excel file (LAICPMSTitaniteData.xls) LA-ICPMS data for feldspar as a Microsoft Excel file (LAICPMSFeldsparData.xls)
DOI: 10.5523/bris.21loiw3fpw372g99l93meaja1
title: A Centrifuge-Based Method for Identifying Novel Genetic Traits That Affect Root-Substrate Adhesion in Arabidopsis thaliana
title: Centrifuge-Based Assay Measures Root Adhesion

description: The physical presence of roots and the compounds they release affect the cohesion between roots and their environment. However, the plant traits that are important for these interactions are unknown and most methods that quantify the contributions of these traits are time-intensive and require specialist equipment and complex substrates. Our lab developed an inexpensive, high-throughput phenotyping assay that quantifies root-substrate adhesion in Arabidopsis thaliana. We now report that this method has high sensitivity and versatility for identifying different types of traits affecting root-substrate adhesion including root hair morphology, vesicle trafficking pathways, and root exudate composition. We describe a practical protocol for conducting this assay and introduce its use in a forward genetic screen to identify novel genes affecting root-substrate interactions. This assay is a powerful tool for identifying and quantifying genetic contributions to cohesion between roots and their environment.
DOI: 10.25318/4510003301-eng
title: Donor rate and average annual donations, by marital status

description: Donor rate and distribution of average annual donations, for the population aged 15 and over, by marital status, Canada and provinces.
DOI: 10.25318/4510003301-fra
title: Taux de donateurs et montant moyen des dons annuels, selon l'état matrimonial

description: Taux de donateurs et répartition du montant moyen des dons annuels, pour les personnes âgées de 15 ans et plus, selon l'état matrimonial, Canada et provinces.
DOI: 10.17632/vwwns9jzgk.1
title: Data for: Experimental constraints on Li isotope fractionation during the interaction between detrital material and seawater

description: Results of experimental investigations of Li isotope fractionation during interactions between detrital materials and seawater
DOI: 10.48370/ofd/rt0tma/gfdd8q
title: HMW_Alopecurus_pratensis_L_H_2749.jpg

description: :unav
DOI: 10.17632/g98rm5588j.1
title: Data for: Evolution of the Ca isotopic composition of the mantle

description: Stable Calcium isotopic composition of komatiites from different localities and different age.
DOI: 10.17632/g98rm5588j.2
title: Data for: Evolution of the Ca isotopic composition of the mantle

description: Stable Calcium isotopic composition of komatiites from different localities and different age.
DOI: 10.17632/8k93yhx4dp.1
title: Data for: Early sulfide saturation in arc volcanic rocks of southeast China: implication for the formation of comagmatic porphyry-epithermal Cu-Au deposits

description: Research Data associated with the manuscript titled "Early sulfide saturation in arc volcanic rocks of southeast China: implication for the formation of comagmatic porphyry–epithermal Cu-Au deposits".
DOI: 10.15468/t5uv9e
title: Revision of the Nearctic genus Tritoxa Loew (Diptera: Ulidiidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sinclair, Bradley J., Macleod, Alyssa M., Wheeler, Terry A. (2021): Revision of the Nearctic genus Tritoxa Loew (Diptera: Ulidiidae). Zootaxa 4920 (3): 359-379, DOI: https://doi.org/10.11646/zootaxa.4920.3.3
DOI: 10.17632/zmcdrvvzc7.1
title: Data for: Evaluation of rammelsbergite (NiAs2) as a novel mineral for 187Re - 187Os dating and implications for unconformity-related U deposits

description: Raw data in excel format
DOI: 10.17632/6n3c3w8p53.1
title: Data for: Molybdenum Geochemistry in Salt Marsh Pond Sediments

description: Excel spreadsheet with four sheets: Sheet 1: Iron-rich pond sediment data Sheet 2: Sulfide-rich pond sediment data Sheet 3: Intermediate pond sediment data Sheet 4: Modelling parameter used in discussion
DOI: 10.5281/zenodo.4530745
title: [dataset] Multi-level Scalability Assessment during the Migration of a Monolithic Application to Microservices

description: Dataset containing raw experimental data to replicate the experiments reported in the manuscript: "Multi-level Scalability Assessment during the Migration of a Monolithic Application to Microservices" submitted for publication to Information and Software Technology Journal, Elsevier.
DOI: 10.5281/zenodo.4530744
title: [dataset] Multi-level Scalability Assessment during the Migration of a Monolithic Application to Microservices

description: Dataset containing raw experimental data to replicate the experiments reported in the manuscript: "Multi-level Scalability Assessment during the Migration of a Monolithic Application to Microservices" submitted for publication to Information and Software Technology Journal, Elsevier.
DOI: 10.17632/m5gndgr557.1
title: Data for: Hoare et al. Melt composition and oxidation state control titanium isotope fractionation during magmatic differentiation

description: Isotope, Major and Trace element data used in Hoare et al. "Melt composition and oxidation state control titanium isotope fractionation during magmatic differentiation".
DOI: 10.25934/00006480.0
title: Available IPD datapackage for study 'A Validation Study to Determine Performance Characteristics and Normative Values for Common Cognitive Instruments Used to Detect Dementia and Lesser Cognitive Impairments in the Elderly'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00006480.1
title: IPD datapackage for study 'A Validation Study to Determine Performance Characteristics and Normative Values for Common Cognitive Instruments Used to Detect Dementia and Lesser Cognitive Impairments in the Elderly' and research request: 'Analyses of available cognitive data from 200 healthy, German-speaking individuals to be used to examine potential patients'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00006482
title: Analyses of available cognitive data from 200 healthy, German-speaking individuals to be used to examine potential patients

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25318/4510003401-eng
title: Donor rate and average annual donations, by education

description: Donor rate and distribution of average annual donations, for the population aged 15 and over, by education, Canada and provinces.
DOI: 10.5281/zenodo.4524924
title: Data and Code for "Quantum measurement arrow of time and fluctuation relations for measuring spin of ultracold atoms"

description: <strong>Data for "Quantum measurement arrow of time and fluctuation relations for measuring spin of ultracold atoms". </strong> Folder "GG_Data" contains .csv data files used to produce Figs. 1 and 2 of the main text. Folder "LGG_Data" contains .csv data files used to produce Fig. 3 of the main text. Folder "SupplementaryFigure1_Data" contains .csv data files used in Supplementary Fig. 1 (interference) <strong>Code for "Quantum measurement arrow of time and fluctuation relations for measuring spin of ultracold atoms". </strong> Folder "Code" contains Mathematica 10 and 12 notebooks used to generate the values recorded in "SourceData.ods". These values were used for plotting the fluctuation theorem in the following figures: Figs. 1, 2 of the main text: "MainText_GG_arrowOfTime_distribution.nb" Fig. 3 of the main text: "MainText_LGG_Irreversibility.nb" Also included are Mathematica notebook used to generate Supplementary Figs. 25 to 36: "SupplementaryInformation_LGG_Figs.nb" Mathematica notebook used for theory simulation of the LGG case: "SupplementaryInformation_LGG_theorySimulation.nb"
description: NPB and MJ acknowledge support from the NSF under Grant No. PHY-1708008 and NASA/JPL RSA Grant No. 1616833. ANJ and SKM acknowledge support from the NSF under award DMR-1809343.
DOI: 10.5281/zenodo.4524923
title: Data and Code for "Quantum measurement arrow of time and fluctuation relations for measuring spin of ultracold atoms"

description: <strong>Data for "Quantum measurement arrow of time and fluctuation relations for measuring spin of ultracold atoms". </strong> Folder "GG_Data" contains .csv data files used to produce Figs. 1 and 2 of the main text. Folder "LGG_Data" contains .csv data files used to produce Fig. 3 of the main text. Folder "SupplementaryFigure1_Data" contains .csv data files used in Supplementary Fig. 1 (interference) <strong>Code for "Quantum measurement arrow of time and fluctuation relations for measuring spin of ultracold atoms". </strong> Folder "Code" contains Mathematica 10 and 12 notebooks used to generate the values recorded in "SourceData.ods". These values were used for plotting the fluctuation theorem in the following figures: Figs. 1, 2 of the main text: "MainText_GG_arrowOfTime_distribution.nb" Fig. 3 of the main text: "MainText_LGG_Irreversibility.nb" Also included are Mathematica notebook used to generate Supplementary Figs. 25 to 36: "SupplementaryInformation_LGG_Figs.nb" Mathematica notebook used for theory simulation of the LGG case: "SupplementaryInformation_LGG_theorySimulation.nb"
description: NPB and MJ acknowledge support from the NSF under Grant No. PHY-1708008 and NASA/JPL RSA Grant No. 1616833. ANJ and SKM acknowledge support from the NSF under award DMR-1809343.
DOI: 10.25318/4510003401-fra
title: Taux de donateurs et montant moyen des dons annuels, selon le niveau de scolarité

description: Taux de donateurs et répartition du montant moyen des dons annuels, pour les personnes âgées de 15 ans et plus, selon le niveau de scolarité, Canada et provinces.
DOI: 10.17632/8gbwdp4ktz.1
title: Data for: Temperature-induced iron (III) reduction results in decreased dissolved organic carbon export in subalpine wetland soils, Colorado, USA

description: FTR data (effluent Fe(II), DOC and pH) obtained at 6 and 18C from experiments with subalpine wetland soils and Fe(II) and DOC export rates from the same experiments
DOI: 10.17632/fgsw73d6nw.1
title: Data for: Hydrothermal calcite-fluid REE partitioning experiments at 200 °C and saturated water vapor pressure

description: Full experimental dataset, tables 1 to 7.
DOI: 10.25318/4510003501-eng
title: https://www150.statcan.gc.ca/t1/tbl1/en/tv.action?pid=4510003501

description: Donor rate and distribution of average annual donations, for the population aged 15 and over, by labour force status, Canada and provinces.
DOI: 10.5281/zenodo.4530775
title: Перечень негосударственных образовательных организаций города Москвы, реализующих программу дошкольного образования

description: Набор данных содержит сведения об образовательных организациях, реализующих программу дошкольного образования, расположенных в пределах установленных границ города Москвы. В наборе доступны такие сведения, как: краткие и полные наименования образовательных организаций; организационно-правовая форма; юридические адреса; реквизиты лицензии; уровни, виды, подвиды дополнительного образования, которые организация также вправе реализовывать на основании лицензии.
DOI: 10.5281/zenodo.4530774
title: Перечень негосударственных образовательных организаций города Москвы, реализующих программу дошкольного образования

description: Набор данных содержит сведения об образовательных организациях, реализующих программу дошкольного образования, расположенных в пределах установленных границ города Москвы. В наборе доступны такие сведения, как: краткие и полные наименования образовательных организаций; организационно-правовая форма; юридические адреса; реквизиты лицензии; уровни, виды, подвиды дополнительного образования, которые организация также вправе реализовывать на основании лицензии.
DOI: 10.25403/upresearchdata.13301438
title: The impact of Business Incubators on Entrepreneurial Ventures

description: These are datasets for a quantitative research on the impact of business incubators on entrepreneurial ventures. The datasets contain SPV files, therefore an SPSS software will be needed to open the files.
DOI: 10.25403/upresearchdata.13301438.v1
title: The impact of Business Incubators on Entrepreneurial Ventures

description: These are datasets for a quantitative research on the impact of business incubators on entrepreneurial ventures. The datasets contain SPV files, therefore an SPSS software will be needed to open the files.
DOI: 10.25318/4510003501-fra
title: Taux de donateurs et montant moyen des dons annuels, selon la situation sur le marché du travail

description: Taux de donateurs et répartition du montant moyen des dons annuels, pour les personnes âgées de 15 ans et plus, selon la situation sur le marché du travail, Canada et provinces.
DOI: 10.6084/m9.figshare.13859330
title: Supplementary Material for: A Computational Systems Biology Approach Identifies SLUG as a Mediator of Partial Epithelial-Mesenchymal Transition (EMT)

description: Epithelial-mesenchymal plasticity comprises reversible transitions among epithelial, hybrid epithelial/mesenchymal (E/M) and mesenchymal phenotypes, and underlies various aspects of aggressive tumor progression such as metastasis, therapy resistance, and immune evasion. The process of cells attaining one or more hybrid E/M phenotypes is termed as partial epithelial mesenchymal transition (EMT). Cells in hybrid E/M phenotype(s) can be more aggressive than those in either fully epithelial or mesenchymal state. Thus, identifying regulators of hybrid E/M phenotypes is essential to decipher the rheostats of phenotypic plasticity and consequent accelerators of metastasis. Here, using a computational systems biology approach, we demonstrate that SLUG (SNAIL2) – an EMT-inducing transcription factor – can inhibit cells from undergoing a complete EMT and thus stabilize them in hybrid E/M phenotype(s). It expands the parametric range enabling the existence of a hybrid E/M phenotype, thereby behaving as a phenotypic stability factor. Our simulations suggest that this specific property of SLUG emerges from the topology of the regulatory network it forms with other key regulators of epithelial-mesenchymal plasticity. Clinical data suggest that SLUG associates with worse patient prognosis across multiple carcinomas. Together, our results indicate that SLUG can stabilize hybrid E/M phenotype(s).
DOI: 10.6084/m9.figshare.13859222
title: Williams etal JEcol Supplemental data files

description: From Williams_etal_JEcol this is the supplemental datasets for root exduates and leachate, including root traits data. A second dataset contains all signficant features and GOLM ids
DOI: 10.6084/m9.figshare.13859222.v1
title: Williams etal JEcol Supplemental data files

description: From Williams_etal_JEcol this is the supplemental datasets for root exduates and leachate, including root traits data. A second dataset contains all signficant features and GOLM ids