cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7991241
title: Transliteration Model for Egyptian Words

description: Transliteration (word) models for hieroglyphic texts created from The Ramses Transliteration Corpus, V. 2019-09-01 based on the Ramses Online data published by Serge Rosmorduc (in https://gitlab.cnam.fr/gitlab/rosmorse/ramses-trl and https://doi.org/10.5281/zenodo.4954597) and from the AES - Ancient Egyptian Sentences; Corpus of Ancient Egyptian sentences for corpus-linguistic research based on the Thesaurus Linguae Aegyptiae data published by Simon Schweitzer (in https://github.com/simondschweitzer/aes).

The creation of the models is explained in: Jauhiainen, H. & T. Jauhiainen 2023. Transliteration Model for Egyptian Words. Digital Humanities in the Nordic and Baltic Countries Publications, 5(1), 149-164. https://doi.org/10.5617/dhnbpub.10659.
DOI: 10.15468/dl.h8cg3b
title: Occurrence Download

description: A dataset containing 670 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.81867 45.03199,7.79981 45.01913,7.79261 45.00215,7.79278 44.98826,7.79998 44.98072,7.82879 44.97437,7.85194 44.98861,7.85399 45.00661,7.84748 45.02427,7.81867 45.03199))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 670 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002369-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2psqwz
title: Occurrence Download

description: A dataset containing 1358 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "CoordinateUncertaintyInMeters 0.0-100.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Potentilla recta L.",
 "Year 1981-2010"
 ]
}

 The dataset includes 1358 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002370-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bca62z
title: Occurrence Download

description: A dataset containing 834 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zaedyus pichiy (Desmarest, 1804)"
 ]
}

 The dataset includes 834 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002372-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4xu2s5
title: Occurrence Download

description: A dataset containing 2672 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lontra longicaudis (Olfers, 1818)"
 ]
}

 The dataset includes 2672 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002371-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6pkatx
title: Occurrence Download

description: A dataset containing 158 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.67941 45.00092,7.68977 45.00092,7.68977 45.01543,7.67941 45.01543,7.67941 45.00092))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 158 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002373-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25404514
title: Supporting Information Appendix S1 for Blais et al. (2025). Reach and effectiveness of conservation translocations when founder animals are sourced from zoos. <i>Animal Conservation</i>. https://zslpublications.onlinelibrary.wiley.com/doi/full/10.1111/acv.70011

description: Supporting Information Appendix S1 contains (3) datasets for used in synthesizing this literature review research, a Key for the data types contained therein, and R code for reproducibly research.
DOI: 10.6084/m9.figshare.25404514.v1
title: Supporting Information Appendix S1 for Blais et al. (2025). Reach and effectiveness of conservation translocations when founder animals are sourced from zoos. <i>Animal Conservation</i>. https://zslpublications.onlinelibrary.wiley.com/doi/full/10.1111/acv.70011

description: Supporting Information Appendix S1 contains (3) datasets for used in synthesizing this literature review research, a Key for the data types contained therein, and R code for reproducibly research.
DOI: 10.5517/ccdc.csd.cc2jxgmk
title: CCDC 2351059: Experimental Crystal Structure Determination

description: Related Article: Yue Wang, Junhao Miao, Honglin Dong, Dongliang Zhang, Bei Chen, Meihui Guan, Ge Zhang, Qian Zhang|2025|Chemical Science|16|5640|doi:10.1039/D5SC00438A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.63wj3a
title: Occurrence Download

description: A dataset listing the 18 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "IucnRedListCategory is one of (EX, EW)"
 ]
}

 The dataset's 18 records were derived from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002367-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2kw3cy
title: CCDC 2379540: Experimental Crystal Structure Determination

description: Related Article: Priyanka Chandrashekar, Arun Karmakar, Ravari Kandy Aparna, Laddi Singh, Pradip Kumar Mondal, Subrata Kundu, Kalishankar Bhattacharyya, Sukhendu Mandal|2025|Chemical Science|16|5726|doi:10.1039/D4SC08408J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jmp1x
title: CCDC 2342609: Experimental Crystal Structure Determination

description: Related Article: Priyanka Chandrashekar, Arun Karmakar, Ravari Kandy Aparna, Laddi Singh, Pradip Kumar Mondal, Subrata Kundu, Kalishankar Bhattacharyya, Sukhendu Mandal|2025|Chemical Science|16|5726|doi:10.1039/D4SC08408J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kw3dz
title: CCDC 2379541: Experimental Crystal Structure Determination

description: Related Article: Priyanka Chandrashekar, Arun Karmakar, Ravari Kandy Aparna, Laddi Singh, Pradip Kumar Mondal, Subrata Kundu, Kalishankar Bhattacharyya, Sukhendu Mandal|2025|Chemical Science|16|5726|doi:10.1039/D4SC08408J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kxmgl
title: CCDC 2381000: Experimental Crystal Structure Determination

description: Related Article: Zhenxiang Zhao, Senhao Wang, Xiaomei Shi, Hongbing Fu, Long Wang|2025|Chemical Science|16|5565|doi:10.1039/D4SC06494A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kxmhm
title: CCDC 2381001: Experimental Crystal Structure Determination

description: Related Article: Zhenxiang Zhao, Senhao Wang, Xiaomei Shi, Hongbing Fu, Long Wang|2025|Chemical Science|16|5565|doi:10.1039/D4SC06494A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.13693494
title: Salmonella In Silico Typing Resource (SISTR) commandline tool database version 1.1.3 used by SISTR release version 1.1.3 and up

description: Context

Salmonella In Silico Typing Resource (SISTR) commandline tool enables the identification of the Salmonella serovar and cgMLST types of Salmonella from whole genome sequencing (WGS) data tby using a large database (10,000+) of Salmonella genomes and cgMLST profiles based on the 330 alleles. This database is the central part of the SISTR tool and contains both metadata on 2660 serovars and the corresponding antigenic formula, 84463 genomes to serovar mappings, sequences of the O, H1 and H2 antigens, 139729 cgMLST sequences and  38240 profiles with pairwise distances, MASH sketch of the 15465 genomes used for species and serovar identification.

For more information and citation please refer to the following publication and official repository at https://github.com/phac-nml/sistr_cmd/tree/master 

Note: This database was used by SISTR tool up to version 1.1.2 inclusive. From SISTR release 1.1.3 onwards the slightly modified version of this database will be used onwards with changes detailed in https://github.com/phac-nml/sistr_cmd/blob/master/CHANGELOG.md

Citation

The Salmonella In Silico Typing Resource (SISTR): an open web-accessible tool for rapidly typing and subtyping draft Salmonella genome assemblies. Catherine Yoshida, Peter Kruczkiewicz, Chad R. Laing, Erika J. Lingohr, Victor P.J. Gannon, John H.E. Nash, Eduardo N. Taboada. PLoS ONE 11(1): e0147101. doi: 10.1371/journal.pone.0147101. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0147101

 

Version changes from v2 to v3

In genomes-to-serovar.txt following serovar changes were made to increase serovar prediction accuracy




genome accession
serovar previous
serovar current


SRR3048937
Ibadan
Mississippi
DOI: 10.5281/zenodo.13693495
title: Salmonella In Silico Typing Resource (SISTR) commandline tool database version 1.1.3 used by SISTR release version 1.1.3 and up

description: Context

Salmonella In Silico Typing Resource (SISTR) commandline tool enables the identification of the Salmonella serovar and cgMLST types of Salmonella from whole genome sequencing (WGS) data tby using a large database (10,000+) of Salmonella genomes and cgMLST profiles based on the 330 alleles. This database is the central part of the SISTR tool and contains both metadata on 2660 serovars and the corresponding antigenic formula, 84463 genomes to serovar mappings, sequences of the O, H1 and H2 antigens, 139729 cgMLST sequences and  38240 profiles with pairwise distances, MASH sketch of the 15465 genomes used for species and serovar identification.

For more information and citation please refer to the following publication and official repository at https://github.com/phac-nml/sistr_cmd/tree/master 

Note: This database was used by SISTR tool up to version 1.1.2 inclusive. From SISTR release 1.1.3 onwards the slightly modified version of this database will be used onwards with changes detailed in https://github.com/phac-nml/sistr_cmd/blob/master/CHANGELOG.md

Citation

The Salmonella In Silico Typing Resource (SISTR): an open web-accessible tool for rapidly typing and subtyping draft Salmonella genome assemblies. Catherine Yoshida, Peter Kruczkiewicz, Chad R. Laing, Erika J. Lingohr, Victor P.J. Gannon, John H.E. Nash, Eduardo N. Taboada. PLoS ONE 11(1): e0147101. doi: 10.1371/journal.pone.0147101. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0147101
DOI: 10.5281/zenodo.14270992
title: Salmonella In Silico Typing Resource (SISTR) commandline tool database version 1.1.3 used by SISTR release version 1.1.3 and up

description: Context

Salmonella In Silico Typing Resource (SISTR) commandline tool enables the identification of the Salmonella serovar and cgMLST types of Salmonella from whole genome sequencing (WGS) data tby using a large database (10,000+) of Salmonella genomes and cgMLST profiles based on the 330 alleles. This database is the central part of the SISTR tool and contains both metadata on 2660 serovars and the corresponding antigenic formula, 84463 genomes to serovar mappings, sequences of the O, H1 and H2 antigens, 139729 cgMLST sequences and  38240 profiles with pairwise distances, MASH sketch of the 15465 genomes used for species and serovar identification.

For more information and citation please refer to the following publication and official repository at https://github.com/phac-nml/sistr_cmd/tree/master 

Note: This database was used by SISTR tool up to version 1.1.2 inclusive. From SISTR release 1.1.3 onwards the slightly modified version of this database will be used onwards with changes detailed in https://github.com/phac-nml/sistr_cmd/blob/master/CHANGELOG.md

Citation

The Salmonella In Silico Typing Resource (SISTR): an open web-accessible tool for rapidly typing and subtyping draft Salmonella genome assemblies. Catherine Yoshida, Peter Kruczkiewicz, Chad R. Laing, Erika J. Lingohr, Victor P.J. Gannon, John H.E. Nash, Eduardo N. Taboada. PLoS ONE 11(1): e0147101. doi: 10.1371/journal.pone.0147101. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0147101

 

Version changes from v1 to v2

In genomes-to-serovar.txt following serovar changes were made to increase serovar prediction accuracy




genome accession
serovar previous
serovar current


17-2557
Paratyphi B var. Java
Paratyphi B


17-8544
Paratyphi B var. Java
Paratyphi B


17-9304
Paratyphi B var. Java
Paratyphi B


18-0116
Paratyphi B var. Java
Paratyphi B


17-7324
Paratyphi B var. Java
Paratyphi B


17-9312
Paratyphi B var. Java
Paratyphi B
DOI: 10.5281/zenodo.15078586
title: Salmonella In Silico Typing Resource (SISTR) commandline tool database version 1.1.3 used by SISTR release version 1.1.3 and up

description: Context

Salmonella In Silico Typing Resource (SISTR) commandline tool enables the identification of the Salmonella serovar and cgMLST types of Salmonella from whole genome sequencing (WGS) data tby using a large database (10,000+) of Salmonella genomes and cgMLST profiles based on the 330 alleles. This database is the central part of the SISTR tool and contains both metadata on 2660 serovars and the corresponding antigenic formula, 84463 genomes to serovar mappings, sequences of the O, H1 and H2 antigens, 139729 cgMLST sequences and  38240 profiles with pairwise distances, MASH sketch of the 15465 genomes used for species and serovar identification.

For more information and citation please refer to the following publication and official repository at https://github.com/phac-nml/sistr_cmd/tree/master 

Note: This database was used by SISTR tool up to version 1.1.2 inclusive. From SISTR release 1.1.3 onwards the slightly modified version of this database will be used onwards with changes detailed in https://github.com/phac-nml/sistr_cmd/blob/master/CHANGELOG.md

Citation

The Salmonella In Silico Typing Resource (SISTR): an open web-accessible tool for rapidly typing and subtyping draft Salmonella genome assemblies. Catherine Yoshida, Peter Kruczkiewicz, Chad R. Laing, Erika J. Lingohr, Victor P.J. Gannon, John H.E. Nash, Eduardo N. Taboada. PLoS ONE 11(1): e0147101. doi: 10.1371/journal.pone.0147101. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0147101

 

Version changes from v2 to v3

In genomes-to-serovar.txt following serovar changes were made to increase serovar prediction accuracy




genome accession
serovar previous
serovar current


SRR3048937
Ibadan
Mississippi
DOI: 10.5517/ccdc.csd.cc2ky2j4
title: CCDC 2381436: Experimental Crystal Structure Determination

description: Related Article: Samantha E. Bodman, Patrycja Stachelek, Umatur Rehman, Felix Plasser, Robert Pal, Stephen J. Butler|2025|Chemical Science|16|5602|doi:10.1039/D4SC07188C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.48q29w
title: Occurrence Download

description: A dataset containing 886 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abrus precatorius L., Vachellia farnesiana (L.) Wight & Arn., Aralia merrillii C.B.Shang, Adenanthera pavonina L., Antigonon leptopus Hook. & Arn., Asparagus densiflorus (Kunth) Jessop, Bacopa monnieri (L.) Pennell, Bothriochloa pertusa (L.) A.Camus, Cardamine flexuosa With., Casuarina equisetifolia L., Citharexylum spinosum L., Colubrina asiatica (L.) Brongn., Thymophylla tenuiloba (DC.) Small, Pontederia crassipes Mart., Eugenia uniflora L., Heliotropium curassavicum L., Lantana camara L., Launaea intybacea (Jacq.) Beauverd, Leucaena leucocephala (Lam.) de Wit, Dolichandra unguis-cati (L.) L.G.Lohmann, Melaleuca quinquenervia (Cav.) S.T.Blake, Neyraudia reynaudiana (Kunth) Keng ex Hitchc., Nymphaea odorata Sol. ex Aiton, Passiflora foetida L., Psidium guajava L., Ricinus communis L., Sparganium angustifolium Michx., Scaevola taccada (Gaertn.) Roxb., Schinus terebinthifolia Raddi, Syngonium podophyllum Schott, Tabebuia heterophylla (DC.) Britton, Megathyrsus maximus (Jacq.) B.K.Simon & S.W.L.Jacobs, Ziziphus mauritiana Lam.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Country is one of (Bahamas)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 886 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002374-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avk68u
title: Occurrence Download

description: A dataset containing 2167 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-92.33200 -52.61630,53.33200 -52.61630,53.33200 5.61630,-92.33200 5.61630,-92.33200 -52.61630))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Buteogallus coronatus (Vieillot, 1817)"
 ]
}

 The dataset includes 2167 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002375-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/29911
title: Chandra X-ray Observatory ObsId 29911

description: Identifying and classifying high-energy galactic sources discovered by INTEGRAL
DOI: 10.15468/dl.kuhj9s
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Microphis argulus (Peters, 1855)"
 ]
}

 The dataset includes 83 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002378-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/dvxn-ae53
title: Data from JWST Spectroscopic View of a Rapidly Growing, Dust-obscured Quasar at  z∼4  : Effect of Dust Extinction Correction on Black Hole Mass and Eddington Ratio Estimation
DOI: 10.34808/x7jp-fw07
title: Study of the effect of transition metal addition on physicochemical and electrochemical properties of cellulose-nickel phosphide composite

description: The oxygen evolution reaction (OER) is a key process in water splitting, enabling the production of clean hydrogen energy. Transition metal phosphides, particularly nickel phosphide (Ni₂P), have garnered attention as potential electrocatalysts for OER due to their high conductivity and catalytic activity. In this study, we present an approach to enhance the electrochemical performance of Ni₂P by incorporating iron, manganese, and nickel into its structure and depositing the composite on a carbon platform. Among the synthesized materials, the cel_Ni₂P_10Fe composite exhibited superior OER activity, achieving a low overpotential of 291 mV at 10 mA·cm⁻² and a Tafel slope of 120 mV·dec⁻¹, along with excellent stability. Electrochemical impedance spectroscopy revealed reduced charge transfer resistance compared to a RuO₂ reference catalyst, indicating improved catalytic efficiency. Comprehensive physicochemical characterization confirmed that the incorporation of iron promotes charge transfer processes and enhances the exposure of active catalytic sites. These findings provide valuable insights into designing cost-effective and high-performance electrocatalysts, advancing sustainable hydrogen production technologies.
DOI: 10.15468/dl.6bq2f4
title: Occurrence Download

description: A dataset containing 95439 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.45276 45.01837,8.06267 45.01837,8.06267 45.41561,7.45276 45.41561,7.45276 45.01837))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 95439 records from 194 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002359-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15090515
title: 2D Hydromechanical Model Simulation Data

description: This zip file contains the simulation data used to generate Figures 2 and 3 in Magno et al., 2025 using a 2D hydromechanical model for the following parameters:



R = 1 and 50

n_k = [1.0, 2.1, 2.4, 2.7, 3.0, 3.3]

Model horizontal resolution = [64, 128, 256, 512]

Simulation time = 0.25 and 20.0
DOI: 10.5281/zenodo.15090516
title: 2D Hydromechanical Model Simulation Data

description: This zip file contains the simulation data used to generate Figures 2 and 3 in Magno et al., 2025 using a 2D hydromechanical model for the following parameters:



R = 1 and 50

n_k = [1.0, 2.1, 2.4, 2.7, 3.0, 3.3]

Model horizontal resolution = [64, 128, 256, 512]

Simulation time = 0.25 and 20.0
DOI: 10.15468/dl.ksdra7
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is South America",
 "MediaType is Image",
 "TaxonKey is Nicotiana longiflora Cav."
 ]
}

 The dataset includes 235 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002379-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.