cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/2x546shhwk.2
title: Chaos Game Representation (CGR images ) of SARS-CoV-2 Variants (Alpha,Beta, Delta, Gamma and Omicron)

description: Currently available genome sequence classification methods are based on text or sequence alignment techniques. Our aim is to build an image-based genome sequence classifier using deep learning technique. In 1990 H J Jeffry proposed a method Chaos Game Representation (CGR), which converts long one-dimensional sequences into two-dimensional images. This dataset contains the CGR images of genomic sequences of SARS-CoV-2 Variants - alpha, beta, delta, gamma, and omicron. The dataset is divided into three folders named train, test, and validate. Each folder contains five subfolders named alpha, beta, delta, gamma, and omicron. The "train" folder has a total of 17500 images - 3500 images in each subfolder. The "test" folder has 5000 images - 1000 from each category. The "validate" folder has 2500 images - 500 images from each individual class. Genomic sequences of the above-mentioned SARS- CoV-2 variants were downloaded from the GISAID database and the sequences were then converted to CGR images using a python script.
DOI: 10.17632/hjppt63s9b.1
title: ROI article contributions

description: This repository contains the Contributions of the article "ROI: A method for identifying organizations receiving personal data". The distribution of the datasets is the following:

Privacy Policies dataset
This dataset ["Policies_urls.csv"] contains 142 privacy policy URLs with the corresponding organization. These URLs were obtained with the two methods (Selenium & Google) described in the article. This is the reason for duplicated URLs.

300 Domain Holders
This dataset ["300_domain_holders.xlsx"] contains three different sheets for each dataset used for the validations and described in the article i.e. Fortune 500, PII_receivers_1 (for the technique's evaluation), and PII_receivers_2 (for ROI's evaluation).

Recipient Domains
This dataset ["Domains_receiving_PII.csv"] contains 40,493 dataflows corresponding to the 1,112 unique domains along with the type of personal data which received from an Android app.
DOI: 10.17632/2r8r7jk5fg.1
title: Apple experimental data and code.

description: Apple experimental data and code.
DOI: 10.17632/6rvkv28nn6.1
title: Effects of dietary fluoranthene on tissue-specific responses of carboxylesterases, acetylcholinesterase and heat shock protein 70 in two forest lepidopteran species

description: In this study, responses of carboxylesterases, acetylcholinesterase, and stress protein Hsp70 were examined in the midgut and midgut tissue, and brain of fifth instar larvae of Lymantria dispar L. and Euproctis chrysorrhoea L. following chronic exposure to dietary fluoranthene. Specific carboxylesterase activity increased significantly in the midgut tissue of E. chrysorrhoea larvae treated with a lower fluoranthene concentration. The specific patterns of isoforms expression, recorded in larvae of both species, enable efficient carboxylesterase activity as a significant part of defense mechanisms. Increased Hsp70 concentration in the brain of L. dispar larvae points to a response to the proteotoxic effects of a lower fluoranthene concentration. Decreased Hsp70 in the brain of E. chrysorrhoea larvae in both treated groups can suggest induction of other mechanisms of defense. The results indicate the importance of the examined parameters in larvae of both species exposed to the pollutant, as well as their potential as biomarkers.
DOI: 10.17632/y2jfk63tpd.1
title: Asbest veins in the open pit conditions

description: Database includes 1660 images of asbestos rock-chunks with asbestos veins  taken in the different weather and day time conditions.  All Data taken in the Bazhenovskoye field, Russia. All data are labeled for instance segmentation (as well as object detection and semantic segmentation) problems and have labeling in the COCO format. The archive contains both: all data in the images folder and annotation in the annotations folder. The labeling was performed manually in the CVAT software. The image size is 2592 × 2048.
DOI: 10.17632/xw44wv2g88.1
title: Dataset of Leak Simulations in Experimental Testbed Water Network

description: This is the first fully labeled open dataset for leak detection and localization in water distribution systems. This dataset includes two hundred and eighty signals acquired from a laboratory-scale water distribution testbed with four types of induced leaks and no-leak. The testbed was 47 m long built from 152.4 mm diameter PVC pipes. Two accelerometers (A1 and A2),  two hydrophones (H1 and H2), and two dynamic pressure sensors (P1 and P2) were deployed to measure acceleration,  acoustic,  and dynamic pressure data. The data were recorded through controlled experiments where the following were changed:  network architecture, leak type, background flow condition, background noise condition, and sensor types and locations. Each signal was recorded for 30 seconds. Network architectures were looped (LO) and branched (BR). Leak types were Longitudinal Crack (LC), Circumferential Crack (CC), Gasket Leak (GL), Orifice Leak (OL), and No-leak (NL). Background flow conditions included 0 L/s (ND), 0.18 L/s, 0.47 L/s, and Transient (background flow rate abruptly changed from 0.47 L/s to 0 L/s at the second 20th of 30-second long measurements). Background noise conditions, with noise (N) and without noise (NN), determined whether a background noise was present during acoustic data measurements. Accelerometer and dynamic pressure data are in ‘.csv’ format, and the hydrophone data are in ‘.raw’ format with 8000 Hz frequency. The file “Python code to convert raw acoustic data to pandas DataFrame.py” converts the raw hydrophone data to DataFrame in Python.
DOI: 10.17632/xw44wv2g88.2
title: Dataset of Leak Simulations in Experimental Testbed Water Network

description: This is the first fully labeled open dataset for leak detection and localization in water distribution systems. This dataset includes two hundred and eighty signals acquired from a laboratory-scale water distribution testbed with four types of induced leaks and no-leak. The testbed was 47 m long built from 152.4 mm diameter PVC pipes. Two accelerometers (A1 and A2),  two hydrophones (H1 and H2), and two dynamic pressure sensors (P1 and P2) were deployed to measure acceleration,  acoustic,  and dynamic pressure data. The data were recorded through controlled experiments where the following were changed:  network architecture, leak type, background flow condition, background noise condition, and sensor types and locations. Each signal was recorded for 30 seconds. Network architectures were looped (LO) and branched (BR). Leak types were Longitudinal Crack (LC), Circumferential Crack (CC), Gasket Leak (GL), Orifice Leak (OL), and No-leak (NL). Background flow conditions included 0 L/s (ND), 0.18 L/s, 0.47 L/s, and Transient (background flow rate abruptly changed from 0.47 L/s to 0 L/s at the second 20th of 30-second long measurements). Background noise conditions, with noise (N) and without noise (NN), determined whether a background noise was present during acoustic data measurements. Accelerometer and dynamic pressure data are in ‘.csv’ format, and the hydrophone data are in ‘.raw’ format with 8000 Hz frequency. The file “Python code to convert raw acoustic data to pandas DataFrame.py” converts the raw hydrophone data to DataFrame in Python.
DOI: 10.17632/9vmwsvsz94.4
title: Data for: "Towards ‘One Substance – One Assessment’: an Analysis of EU Chemical Registration and Aquatic Risk Assessment Frameworks"

description: This repository contains information relevant to the publication "Towards ‘One Substance – One Assessment’: an Analysis of EU Chemical Registration and Aquatic Risk Assessment Frameworks" (in press). The first excel sheet presented here contains a list of chemicals registered as a 1) biocide (Reg (EC) No 528/2012), 2) industrial chemical (REACH, (Reg (EC) No 1907/2006), 3) pesticide (Reg (EC) No 1107/2009), 4) medicines for human use (Directive 2001/83/EC), and 5) a veterinary medicine (Directive 2001/82/EC). The second excel sheet contains all substances registered under REACH for which a freshwater PNEC could be retrieved from ECHA's database. The third dataset contains a list of all chemicals that are registered under multiple registration frameworks, for which freshwater PNECs and corresponding assessment factors to derive PNECs were available.
DOI: 10.17632/9vmwsvsz94.1
title: Data for: "Towards a toxic-free environment: from current EU chemicals’ legislation to ‘one substance – one assessment’"

description: This repository contains information relevant to the publication "Towards a toxic-free environment: from current EU chemicals’ legislation to ‘one substance – one assessment’" (in preparation). The first excel sheet presented here contains a list of chemicals registered as a 1) biocide (Reg (EC) No 528/2012), 2) industrial chemical (REACH, (Reg (EC) No 1907/2006), 3) pesticide (Reg (EC) No 1107/2009), 4) medicines for human use (Directive 2001/83/EC), and 5) a veterinary medicine (Directive 2001/82/EC). The second excel sheet contains all substances registered under REACH for which a freshwater PNEC could be retrieved from ECHA's database. The third dataset contains a list of all chemicals that are registered under multiple registration frameworks, for which a PNEC (Predicted No Effect Concentration) for the freshwater environment was available.
DOI: 10.17632/9vmwsvsz94.2
title: Data for: "Towards a toxic-free environment: from current EU chemicals’ legislation to ‘one substance – one assessment’"

description: This repository contains information relevant to the publication "Towards a toxic-free environment: from current EU chemicals’ legislation to ‘one substance – one assessment’" (in preparation). The first excel sheet presented here contains a list of chemicals registered as a 1) biocide (Reg (EC) No 528/2012), 2) industrial chemical (REACH, (Reg (EC) No 1907/2006), 3) pesticide (Reg (EC) No 1107/2009), 4) medicines for human use (Directive 2001/83/EC), and 5) a veterinary medicine (Directive 2001/82/EC). The second excel sheet contains all substances registered under REACH for which a freshwater PNEC could be retrieved from ECHA's database. The third dataset contains a list of all chemicals that are registered under multiple registration frameworks, for which a PNEC (Predicted No Effect Concentration) for the freshwater environment was available.
DOI: 10.17632/9vmwsvsz94.3
title: Data for: "Towards ‘One Substance – One Assessment’: an Analysis of EU Chemical Registration and Risk Assessment Frameworks"

description: This repository contains information relevant to the publication "Towards ‘One Substance – One Assessment’: an Analysis of EU Chemical Registration and Risk Assessment Frameworks" (in preparation). The first excel sheet presented here contains a list of chemicals registered as a 1) biocide (Reg (EC) No 528/2012), 2) industrial chemical (REACH, (Reg (EC) No 1907/2006), 3) pesticide (Reg (EC) No 1107/2009), 4) medicines for human use (Directive 2001/83/EC), and 5) a veterinary medicine (Directive 2001/82/EC). The second excel sheet contains all substances registered under REACH for which a freshwater PNEC could be retrieved from ECHA's database. The third dataset contains a list of all chemicals that are registered under multiple registration frameworks, for which a PNEC (Predicted No Effect Concentration) for the freshwater environment was available.
DOI: 10.17632/9vmwsvsz94.5
title: Data for: "Towards ‘One Substance – One Assessment’: an Analysis of EU Chemical Registration and Aquatic Risk Assessment Frameworks"

description: This repository contains information relevant to the publication "van Dijk, J., Gustavsson, M., Dekker, S. C., & van Wezel, A. P. (2021). Towards ‘one substance–one assessment’: An analysis of EU chemical registration and aquatic risk assessment frameworks. Journal of Environmental Management, 280, 111692". 

The first excel sheet presented here contains a list of chemicals registered as a 1) biocide (Reg (EC) No 528/2012), 2) industrial chemical (REACH, (Reg (EC) No 1907/2006), 3) pesticide (Reg (EC) No 1107/2009), 4) medicines for human use (Directive 2001/83/EC), and 5) a veterinary medicine (Directive 2001/82/EC). 

The second excel sheet contains all substances registered under REACH for which a freshwater PNEC could be retrieved from ECHA's database.

The third dataset contains a list of all chemicals that are registered under multiple registration frameworks, for which freshwater PNECs and corresponding assessment factors to derive PNECs were available.
DOI: 10.17632/n2fdtbwrxb.1
title: Practice and Knowledge DS Indonesian Adult

description: These are supplementary materials and raw data of knowledge and practice of dietary supplement among Indonesian adults during post-Delta wave COVID-19 Pandemic.
DOI: 10.17632/jp57yk9469.1
title: Chemo-enzymatic derivatization of O-GlcNAcylated recombinant human tau: analysis during different reaction steps - RAW data files - LC-HRMS (6600, Sciex) aquisition

description: Chemo-enzymatic derivatization (GalNAzylation, biotinylation) of O-GlcNAcylated recombinant human tau, trypsinization, enrichment via coupling to streptavidin beads, and release of tagged peptides by β-elimination – Michael addition reaction. LC-HRMS (6600, Sciex) analysis during different steps of the sample preparation to monitor formation of reaction products and removal of non-modified tryptic peptides. Final extract contains purified sulfited peptides for the localization of tau O-GlcNAcylation sites.
"008": a digest of non-derivatized trypsinized O-GlcNAcylated recombinant human tau
And, from derivatized and trypsinized O-GlcNAcylated recombinant human tau, XICs of tryptic tau peptides in:
"031": the tryptic digest before addition of streptavidin beads
"041": the depleted fraction after incubation with streptavidin beads
"043": the final extract after release from streptavidin beads
DOI: 10.5281/zenodo.7368373
title: anonymous submission

description: pending
DOI: 10.5281/zenodo.7368372
title: anonymous submission

description: pending
DOI: 10.5281/zenodo.7430215
title: anonymous submission

description: pending
DOI: 10.17632/2xrvg2sfbp.1
title: Hossain et al JAAD - Keratinocyte carcinoma resected by Mohs micrographic surgery in individuals with skin of color: an observational study

description: Supplemental Table: Tumor and Mohs Micrographic Surgery in Hispanic Individuals Characterized by Fitzpatrick Skin Type


Supplemental data accompany the following research letter:

Keratinocyte carcinoma resected by Mohs micrographic surgery in individuals with skin of color: an observational study.

Onjona B. Hossain BS, Karolina Mieczkowska MD, Rithu Srikantha MD, Alexandra Rzepecki MD, David H. Ciocon MD, Dean Hosgood PhD, Ramone F. Williams MD, MPhil
DOI: 10.17632/2xrvg2sfbp.2
title: Hossain et al JAAD - Keratinocyte carcinoma resected by Mohs micrographic surgery in individuals with skin of color: an observational study

description: Supplemental Table: Tumor and Mohs Micrographic Surgery in Hispanic Individuals Characterized by Fitzpatrick Skin Type


Supplemental data accompany the following research letter:

Keratinocyte carcinoma resected by Mohs micrographic surgery in individuals with skin of color: an observational study.

Onjona B. Hossain BS, Karolina Mieczkowska MD, Rithu Srikantha MD, Alexandra Rzepecki MD, David H. Ciocon MD, Dean Hosgood PhD, Ramone F. Williams MD, MPhil
DOI: 10.17632/x768pztf5v.1
title: Using wearable technology to measure sleep behaviour and general physiology of domestic dogs – a prospective tool for animal welfare assessment

description: Data used to compare behavioural data from the petpace and from normal collection (by humans).
DOI: 10.17632/h5vdrx4n3d.1
title: Digestion of recombinant O-GlcNAcylated human tau with different enzymes - RAW data files - nLC-Q Exactive HF acquisition

description: O-GlcNAcylated recombinant human tau was digested with different enzymes, rendering 5 digestion conditions: trypsin only (1), asp-N only (2), glu-C only (3), trypsin followed by asp-N (4) and trypsin followed by glu-C (5). nLC-HRMS analysis was performed for the identification of tau O-GlcNAc sites. Data were acquired in data dependent MS2 (ddMS2) mode and for low abundant O-GlcNAc peptides also in parallel reaction monitoring (PRM) mode.
DOI: 10.17632/8n5j45dnd8.1
title: Recombinant O-GlcNAcylated human tau after GalNAzylation, biotinylation, trypsinization, coupling to streptavidin beads and β-elimination-Michael addition - RAW data files - nLC-Q Exactive HF acquisition

description: Chemo-enzymatic derivatization (GalNAzylation, biotinylation) of O-GlcNAcylated recombinant human tau, trypsinization, enrichment via coupling to streptavidin beads, and release of tagged peptides by β-elimination – Michael addition reaction. nLC-HRMS (Q Exactive HF) analysis of final extract to monitor sulfited peptides for the localization of tau O-GlcNAcylation sites. Data were acquired in data dependent MS2 (ddMS2) mode and for low abundant O-GlcNAc peptides also in parallel reaction monitoring (PRM) mode.
DOI: 10.5281/zenodo.7430283
title: Extracted Heuristics for SoS Design

description: Extracted Heuristics for SoS Design
DOI: 10.5281/zenodo.7430282
title: Extracted Heuristics for SoS Design

description: Extracted Heuristics for SoS Design
DOI: 10.17632/x8m7y6jj47.1
title: Data for Social and non-social categorisation in investment decisions and learning

description: Data for Social and non-social categorisation in investment decisions and learning
DOI: 10.17632/rvg7yg9wxv.1
title: Data for: "Revisiting Approaches in Historical Accounting Studies Towards a Research Agenda in Brazil" published by ASAA - Advances in Scientific and Applied Accounting

description: The database gathers the scientific production on accounting history published in Brazil in the last 40 years. The archives include 162 original texts, among them 34 master's dissertations, 14 doctoral theses, and 114 scientific articles. It is the biggest and most complete database on accounting history in the Brazilian context.
DOI: 10.17632/f225khx5p7.1
title: WORLD HAB DATA

description: papers in relation with HAB in different regions of the coastal ocean worlwide
DOI: 10.17632/79wzs93pf3.1
title: ESTHER study: Hen egg white bovine colostrum supplement reduces symptoms in individuals with mild or moderate coronavirus disease of 2019: A double-blind randomized control trial 

description: Files:
1. Individual participant data that underlie the results reported in the article currently under review :
Hen egg white bovine colostrum supplement reduces symptoms in individuals with mild or moderate coronavirus disease of 2019: A double-blind randomized control trial 
Jaclyn Kelly Mann, Tarylee Reddy, Mary van der Stok, Ayanda Ngubane, Takalani Mulaudzi, Nobuhle Mchunu, Portia Nevhungoni, Nithendra Manickchund, Pariva Manickchund,  Chelline Helena Louise Cairns, Vaneshree Govender, Thumbi Ndung’u, Mahomed Yunus Suleman Moosa, Bernadett Isabel Gosnell
Abstract from the article under review:
Ovotransferrin and lysozyme in hen egg white and lactoferrin in bovine colostrum have immunomodulatory and antiviral properties.  It was hypothesized that consumption of hen egg white and bovine colostrum would reduce risk of progression to severe disease in patients with mild/moderate coronavirus disease of 2019 (COVID-19).  In this double-blind randomized control study, COVID-19 positive individuals at increased risk of severe disease and within 5 days of symptom onset were randomly assigned to consume hen egg white and bovine colostrum (n = 77) or placebo (n = 79) twice daily for 5 days. During the 6-week follow-up, information on symptoms and Karnofsky status were collected telephonically on days 2, 4, 7, 14 and 28 post-enrollment, as well as at a clinic visit at 11-13 days post-symptom onset, during which viral clearance was assessed via combined nasal and oropharyngeal swabs. Post-COVID-19 symptoms were assessed telephonically at day 42.  Only 1 participant (active arm) progressed to severe disease.  There were significantly fewer protocol-defined severe-type symptoms in the active arm at day 4 (p = 0.046) and day 11-13 (p = 0.007).  The individual symptoms that were significantly reduced in the active arm were chest pain (day 4, p = 0.038), fever/chills (day 7, p = 0.014), joint pain/malaise (day 11-13, p = 0.009), and sore throat (day 11-13, p = 0.038).  No significant differences in Karnofsky score, viral clearance or post-COVID-19 sequelae were observed.  The intervention reduced symptoms in individuals with mild/moderate COVID-19. The trial was registered at sanctr.samrc.ac.za (DOH-27-062021-9191).
2. The trial protocol and protocol appendices.
DOI: 10.17632/zx63d6fkkt.1
title: Metacognitive Awareness Scale

description: The metacognitive awareness scale is meant for adolescents and adults from secondary to higher education level students. Its purpose is to differentiate between high and low level of students in relation to metacognition. It may be helpful in identifying students with poor metacognitive level who may need counseling or training to help them move towards high achievement. 
The present scale may be used to know the level of Metacognitive Awareness (knowledge of cognition and regulation of cognition) among students stydying at secondary to post-graduate level. It can be administered either individually or in group. There is no time limit for the completion of scale; however, an individual requires 30 minutes to respond to all the items of the scale.
DOI: 10.17632/dyzsvdhcjx.1
title: Montana Wildfires on Managed Land

description: Wildfires can be hugely destructive natural disasters. However, they are also incredibly important for the lifecycle of many forest ecosystems. Wildfires serve as a reset for many ecosystems, clearing out detritus and allowing an opportunity for some seeds to flourish with less competition from older individuals. Without wildfires, the world may lose some species that need them in order to reproduce. However, wildfires can also be damaging to personal property, economic resources, and people’s ability to access clean drinking water and food.
This data set explores the connections between land management and the occurrence of wildfires in the state of Montana
DOI: 10.6073/pasta/abde2d943be2b3828802d07c3e51469f
title: Year-round metabolism data from Lakes Simcoe (Ontario, 2010-2011), Diefenbaker, Blackstrap, and Broderick (Saskatchewan, 2013-2014), Canada.

description: Winter, historically a largely un-monitored season, is important and changing. There is evidence of the importance of under-ice phytoplankton in temperate lakes, but it is currently unknown if the often high winter phytoplankton biomass translates to high productivity and what influence it has on year-round lake metabolism. Winters are getting shorter, but our ability to forecast change is hindered by our limited understanding of what happens under the ice. Here, we compare under-ice and open-water rates of areal gross production (AGP) and areal respiration (AR) from 3 Canadian reservoirs and one large lake using oxygen (O2) changes in light-dark bottle experiments, δ18O-O2 models, and fluorometry. During the open-water season, AGP was 81× greater than under-ice rates, with AR rates 8× higher than measured during winter. Open-water samples indicated autotrophy (P:R= 1.10). Consistent with current assumptions, the cold under-ice environment is associated with low primary productivity. Our results challenge the assumption that mean water column irradiance is lowest during the winter in dimictic water bodies; we find similar light conditions during the open-water season. Winter mean light is regulated by snow thickness; upon manual snow removal, we observe a 67 % increase in under-ice mean water column irradiance. The first-ever under-ice application of the δ18O2-method indicated that AGP responded to improvements in light. This study reveals further insights into the importance of under-ice metabolism on year-round processes in a changing climate.