cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.2645680
title: Geochemical behaviours of chemical elements during subduction-zone metamorphism and geodynamic significance

description: Seafloor subduction and subduction-zone metamorphism (SZM) are understood to be the very cause of both subduction-zone magmatism and mantle compositional heterogeneity. In this article, we compile geochemical data for blueschist and eclogite facies rocks from global palaeo-subduction-zones in the literature, including those from the Chinese Western Tianshan ultrahigh pressure (UHP) metamorphic belt. We synthesize our up-to-date understanding on how chemical elements behave and their controls during subduction-zone metamorphism. Although the compositional heterogeneity of metamorphic minerals from subducted rocks has been recently reported, we emphasize that the mineral compositional heterogeneity is controlled by elemental availability during mineral growth, which is affected by the protolith composition, the inherited composition of precursor minerals, and the competition with neighbouring growing minerals. In addition, given the likely effects of varying protolith compositions and metamorphic conditions on elemental behaviours, we classify meta-mafic rocks from global palaeo-subduction-zones with varying metamorphic conditions into groups in terms of their protolith compositions (i.e. ocean island basalt (OIB)-like, enriched mid-ocean ridge basalt (MORB)-like, normal [N]-MORB-like), and discuss geochemical behaviours of chemical elements within these co-genetic groups rather than simply accepting the conclusions in the literature. We also discuss the geochemical consequences of SZM with implications for chemical geodynamics, and propose with emphasis that: (1) the traditionally accepted ‘fluid flux induced-melting’ model for arc magmatism requires revision; and (2) the residual subducted ocean crust cannot be the major source material for OIB, although it can contribute to the deep mantle compositional heterogeneity. We also highlight some important questions and problems that need further investigations, e.g. complex subduction-zone geochemical processes, different contributions of seafloor subduction and resultant subduction of continental materials, and the representativeness of studied HP–UHP metamorphic rocks.
DOI: 10.6084/m9.figshare.2645680.v1
title: Geochemical behaviours of chemical elements during subduction-zone metamorphism and geodynamic significance

description: Seafloor subduction and subduction-zone metamorphism (SZM) are understood to be the very cause of both subduction-zone magmatism and mantle compositional heterogeneity. In this article, we compile geochemical data for blueschist and eclogite facies rocks from global palaeo-subduction-zones in the literature, including those from the Chinese Western Tianshan ultrahigh pressure (UHP) metamorphic belt. We synthesize our up-to-date understanding on how chemical elements behave and their controls during subduction-zone metamorphism. Although the compositional heterogeneity of metamorphic minerals from subducted rocks has been recently reported, we emphasize that the mineral compositional heterogeneity is controlled by elemental availability during mineral growth, which is affected by the protolith composition, the inherited composition of precursor minerals, and the competition with neighbouring growing minerals. In addition, given the likely effects of varying protolith compositions and metamorphic conditions on elemental behaviours, we classify meta-mafic rocks from global palaeo-subduction-zones with varying metamorphic conditions into groups in terms of their protolith compositions (i.e. ocean island basalt (OIB)-like, enriched mid-ocean ridge basalt (MORB)-like, normal [N]-MORB-like), and discuss geochemical behaviours of chemical elements within these co-genetic groups rather than simply accepting the conclusions in the literature. We also discuss the geochemical consequences of SZM with implications for chemical geodynamics, and propose with emphasis that: (1) the traditionally accepted ‘fluid flux induced-melting’ model for arc magmatism requires revision; and (2) the residual subducted ocean crust cannot be the major source material for OIB, although it can contribute to the deep mantle compositional heterogeneity. We also highlight some important questions and problems that need further investigations, e.g. complex subduction-zone geochemical processes, different contributions of seafloor subduction and resultant subduction of continental materials, and the representativeness of studied HP–UHP metamorphic rocks.
DOI: 10.6084/m9.figshare.2656255.v5
title: HIV neuropathy: Going, going...but not gone

description: Files associated with a blog post (painblogr.org) that examined whether the prevalence of HIV-associated sensory neuropathy (HIV-SN), and the presence of pain in those with HIV-SN, differs between patients stratified according to whether they have/have not been exposed to neurotoxic antiretroviral drugs.<br>The analysis used data published in Table 1 and Table 2 of Ellis et al. Continued high prevalence and adverse clinical impact of human immunodeficiency virus-associated sensory neuropathy in the era of combination antiretroviral therapy: the CHARTER Study. <i>Arch. Neurol</i>. <b>67</b>: 552–558, 2010. doi: 10.1001/archneurol.2010.76. <br>The files include:1. A web archive file of blog posting2. A markdown document of the blog3. The data analysis script (RMarkdown)4. Figures generated in the analysis (.svg and .png format)5. Tables extracted from Ellis et al. (2010)<br>The permalink for the blog posting is: http://painblogr.org/hiv-neuropathy-going-going-but-not-gone (<i>link below</i>).<br>A copy of the analysis scripts is available under the ellis-2010 subdirectory of the second-look-PAIN GitHub repository (http://github.com/kamermanpr/second-look-PAIN.git; <i>link below</i>).<br>
DOI: 10.6084/m9.figshare.2885308.v109
title: UNH-RVAT 3-D SST RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions using the k-omega SST RANS model in OpenFOAM 2.3.x. See the link below for case files and download instructions.
DOI: 10.6084/m9.figshare.2951263.v117
title: UNH-RVAT 3-D Spalart--Allmaras RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions with the Spalart--Allmaras RANS model in OpenFOAM 2.3.x (590d57f32fed). See link below for case files (note: use the `SpalartAllmaras` branch), which include a script for downloading and extracting, as well as scripts for post-processing.
DOI: 10.6084/m9.figshare.2951263.v118
title: UNH-RVAT 3-D Spalart--Allmaras RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions with the Spalart--Allmaras RANS model in OpenFOAM 2.3.x (590d57f32fed). See link below for case files (note: use the `SpalartAllmaras` branch), which include a script for downloading and extracting, as well as scripts for post-processing.
DOI: 10.6084/m9.figshare.2640835
title: Pediatric in-hospital Death from Infectious Disease in Uganda: Derivation of Clinical Prediction Models

description: Pediatric in-hospital Death from Infectious Disease in Uganda: Derivation of Clinical Prediction Models
DOI: 10.6084/m9.figshare.2656255.v6
title: HIV neuropathy: down, but not out

description: Files associated with a blog post (painblogr.org) that examined whether the prevalence of HIV-associated sensory neuropathy (HIV-SN), and the presence of pain in those with HIV-SN, differs between patients stratified according to whether they have/have not been exposed to neurotoxic antiretroviral drugs.<br>The analysis used data published in Table 1 and Table 2 of Ellis et al. Continued high prevalence and adverse clinical impact of human immunodeficiency virus-associated sensory neuropathy in the era of combination antiretroviral therapy: the CHARTER Study. <i>Arch. Neurol</i>. <b>67</b>: 552–558, 2010. doi: 10.1001/archneurol.2010.76. <br>The files include:1. A web archive file of blog posting2. A markdown document of the blog3. The data analysis script (RMarkdown)4. Figures generated in the analysis (.svg and .png format)5. Tables extracted from Ellis et al. (2010)<br>The permalink for the blog posting is: http://painblogr.org/hiv-neuropathy-going-going-but-not-gone (<i>link below</i>).<br>A copy of the analysis scripts is available under the ellis-2010 subdirectory of the second-look-PAIN GitHub repository (http://github.com/kamermanpr/second-look-PAIN.git; <i>link below</i>).<br>
DOI: 10.6084/m9.figshare.2640835.v1
title: Pediatric in-hospital Death from Infectious Disease in Uganda: Derivation of Clinical Prediction Models

description: Pediatric in-hospital Death from Infectious Disease in Uganda: Derivation of Clinical Prediction Models
DOI: 10.6084/m9.figshare.2885308.v110
title: UNH-RVAT 3-D SST RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions using the k-omega SST RANS model in OpenFOAM 2.3.x. See the link below for case files and download instructions.
DOI: 10.6084/m9.figshare.2885308.v111
title: UNH-RVAT 3-D SST RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions using the k-omega SST RANS model in OpenFOAM 2.3.x. See the link below for case files and download instructions.
DOI: 10.6084/m9.figshare.2656255.v7
title: HIV-associated sensory neuropathy: down, but not out

description: Files associated with a blog post (painblogr.org) that examined whether the prevalence of HIV-associated sensory neuropathy (HIV-SN), and the presence of pain in those with HIV-SN, differs between patients stratified according to whether they have/have not been exposed to neurotoxic antiretroviral drugs.<br>The analysis used data published in Table 1 and Table 2 of Ellis et al. Continued high prevalence and adverse clinical impact of human immunodeficiency virus-associated sensory neuropathy in the era of combination antiretroviral therapy: the CHARTER Study. <i>Arch. Neurol</i>. <b>67</b>: 552–558, 2010. doi: 10.1001/archneurol.2010.76. <br>The files include:1. A web archive file of blog posting2. A markdown document of the blog3. The data analysis script (RMarkdown)4. Figures generated in the analysis (.svg and .png format)5. Tables extracted from Ellis et al. (2010)<br>The permalink for the blog posting is: http://painblogr.org/hiv-neuropathy-going-going-but-not-gone (<i>link below</i>).<br>A copy of the analysis scripts is available under the ellis-2010 subdirectory of the second-look-PAIN GitHub repository (http://github.com/kamermanpr/second-look-PAIN.git; <i>link below</i>).<br>
DOI: 10.6084/m9.figshare.2951263.v119
title: UNH-RVAT 3-D Spalart--Allmaras RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions with the Spalart--Allmaras RANS model in OpenFOAM 2.3.x (590d57f32fed). See link below for case files (note: use the `SpalartAllmaras` branch), which include a script for downloading and extracting, as well as scripts for post-processing.
DOI: 10.6084/m9.figshare.2656255.v8
title: HIV-associated sensory neuropathy: down, but not out

description: Files associated with a blog post (painblogr.org) that examined whether the prevalence of HIV-associated sensory neuropathy (HIV-SN), and the presence of pain in those with HIV-SN, differs between patients stratified according to whether they have/have not been exposed to neurotoxic antiretroviral drugs.<br>The analysis used data published in Table 1 and Table 2 of Ellis et al. Continued high prevalence and adverse clinical impact of human immunodeficiency virus-associated sensory neuropathy in the era of combination antiretroviral therapy: the CHARTER Study. <i>Arch. Neurol</i>. <b>67</b>: 552–558, 2010. doi: 10.1001/archneurol.2010.76. <br>The files include:1. A web archive file of blog posting2. A markdown document of the blog3. The data analysis script (RMarkdown)4. Figures generated in the analysis (.svg and .png format)5. Tables extracted from Ellis et al. (2010)<br>The permalink for the blog posting is: http://painblogr.org/hiv-neuropathy-down-but-not-out (<i>link below</i>).<br>A copy of the analysis scripts is available under the ellis-2010 subdirectory of the second-look-PAIN GitHub repository (http://github.com/kamermanpr/second-look-PAIN.git; <i>link below</i>).<br>
DOI: 10.6084/m9.figshare.2885308.v112
title: UNH-RVAT 3-D SST RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions using the k-omega SST RANS model in OpenFOAM 2.3.x. See the link below for case files and download instructions.
DOI: 10.6084/m9.figshare.2656255.v10
title: HIV-associated sensory neuropathy: down, but not out

description: Files associated with a blog post (painblogr.org) that examined whether the prevalence of HIV-associated sensory neuropathy (HIV-SN), and the presence of pain in those with HIV-SN, differs between patients stratified according to whether they have/have not been exposed to neurotoxic antiretroviral drugs.<br>The analysis used data published in Table 1 and Table 2 of Ellis et al. Continued high prevalence and adverse clinical impact of human immunodeficiency virus-associated sensory neuropathy in the era of combination antiretroviral therapy: the CHARTER Study. <i>Arch. Neurol</i>. <b>67</b>: 552–558, 2010. doi: 10.1001/archneurol.2010.76. <br>The files include:1. A web archive file of blog posting2. A markdown document of the blog3. The data analysis script (RMarkdown)4. Figures generated in the analysis (.svg and .png format)5. Tables extracted from Ellis et al. (2010)<br>The permalink for the blog posting is: http://painblogr.org/hiv-neuropathy-down-but-not-out (<i>link below</i>).<br>A copy of the analysis scripts is available under the ellis-2010 subdirectory of the second-look-PAIN GitHub repository (http://github.com/kamermanpr/second-look-PAIN.git; <i>link below</i>).<br>
DOI: 10.6084/m9.figshare.2626356
title: Sampling for Conditional Inference on Contingency Tables

description: We propose new sequential importance sampling methods for sampling contingency tables with given margins. The proposal for each method is based on asymptotic approximations to the number of tables with fixed margins. These methods generate tables that are very close to the uniform distribution. The tables, along with their importance weights, can be used to approximate the null distribution of test statistics and calculate the total number of tables. We apply the methods to a number of examples and demonstrate an improvement over other methods in a variety of real problems. Supplementary materials are available online.
DOI: 10.6084/m9.figshare.2656255.v9
title: HIV-associated sensory neuropathy: down, but not out

description: Files associated with a blog post (painblogr.org) that examined whether the prevalence of HIV-associated sensory neuropathy (HIV-SN), and the presence of pain in those with HIV-SN, differs between patients stratified according to whether they have/have not been exposed to neurotoxic antiretroviral drugs.<br>The analysis used data published in Table 1 and Table 2 of Ellis et al. Continued high prevalence and adverse clinical impact of human immunodeficiency virus-associated sensory neuropathy in the era of combination antiretroviral therapy: the CHARTER Study. <i>Arch. Neurol</i>. <b>67</b>: 552–558, 2010. doi: 10.1001/archneurol.2010.76. <br>The files include:1. A web archive file of blog posting2. A markdown document of the blog3. The data analysis script (RMarkdown)4. Figures generated in the analysis (.svg and .png format)5. Tables extracted from Ellis et al. (2010)<br>The permalink for the blog posting is: http://painblogr.org/hiv-neuropathy-down-but-not-out (<i>link below</i>).<br>A copy of the analysis scripts is available under the ellis-2010 subdirectory of the second-look-PAIN GitHub repository (http://github.com/kamermanpr/second-look-PAIN.git; <i>link below</i>).<br>
DOI: 10.6084/m9.figshare.2951263.v120
title: UNH-RVAT 3-D Spalart--Allmaras RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions with the Spalart--Allmaras RANS model in OpenFOAM 2.3.x (590d57f32fed). See link below for case files (note: use the `SpalartAllmaras` branch), which include a script for downloading and extracting, as well as scripts for post-processing.
DOI: 10.6084/m9.figshare.2626050
title: Design and cognitive evaluation of 6 dynamic lane departure warning symbols

description: <b>Objective</b>: Lane departure, caused by inattention, distraction, drowsiness, or any unusual driver behavior, is a typical risk threatening the driver as well as other road users. Accurate perception of such situations through effective warnings would help drivers to avoid serious consequences. With regard to critical functions of warning symbols for risk communication, the present study focused on providing effective and easily perceivable symbols, compatible with human cognitive capabilities. Thus, the main purpose of the present study was to design and cognitively appraise 6 newly designed dynamic symbols, candidates for a new type of lane departure warning system. <b>Methods</b>: Simplicity, familiarity, concreteness, meaningfulness, and semantic closeness were the major assessment criteria, defining cognitive features by the earlier researchers in the field. A total number of 187 driving license applicants, with a mean age of 20.58 years (SD = 3.20), participated in the present survey. The participants rated cognitive features of the 6 dynamic symbols along a 0–100 scale. <b>Results</b>: Significant main effect of the element factor type of the designed symbols on rating cognitive features revealed that the existence of car element was the best predictor for illustrating lane departure. The interaction of both element factor and location of element factor significantly affected the ratings. However, the location of element factor did not solely have any strong effect on the ratings. The results also demonstrated that semantic closeness received the highest overall mean score across symbols (M = 61.80), especially within the symbols that include the car element (M = 75.67). Moreover, a significant difference was observed between the average ratings of the cognitive features, despite the fact that a significant correlation was found between cognitive features. <b>Conclusion</b>: The most considerable result of the current study was the match between the symbol with the highest ratings and the International Organization for Standardization (ISO)-related icon in appearance. Because previous studies demonstrated a strong correlation between comprehension scores of the symbol and both semantic closeness and meaningfulness, high-level comprehensibility of the best ranked symbol is expected.
DOI: 10.6084/m9.figshare.2626356.v1
title: Sampling for Conditional Inference on Contingency Tables

description: We propose new sequential importance sampling methods for sampling contingency tables with given margins. The proposal for each method is based on asymptotic approximations to the number of tables with fixed margins. These methods generate tables that are very close to the uniform distribution. The tables, along with their importance weights, can be used to approximate the null distribution of test statistics and calculate the total number of tables. We apply the methods to a number of examples and demonstrate an improvement over other methods in a variety of real problems. Supplementary materials are available online.
DOI: 10.6084/m9.figshare.2885308.v113
title: UNH-RVAT 3-D SST RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions using the k-omega SST RANS model in OpenFOAM 2.3.x. See the link below for case files and download instructions.
DOI: 10.6084/m9.figshare.2951263.v121
title: UNH-RVAT 3-D Spalart--Allmaras RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions with the Spalart--Allmaras RANS model in OpenFOAM 2.3.x (590d57f32fed). See link below for case files (note: use the `SpalartAllmaras` branch), which include a script for downloading and extracting, as well as scripts for post-processing.
DOI: 10.6084/m9.figshare.2885308.v114
title: UNH-RVAT 3-D SST RANS simulation results

description: Results from simulating the UNH-RVAT cross-flow turbine in three dimensions using the k-omega SST RANS model in OpenFOAM 2.3.x. See the link below for case files and download instructions.
DOI: 10.6084/m9.figshare.2626050.v2
title: Design and cognitive evaluation of 6 dynamic lane departure warning symbols

description: <b>Objective</b>: Lane departure, caused by inattention, distraction, drowsiness, or any unusual driver behavior, is a typical risk threatening the driver as well as other road users. Accurate perception of such situations through effective warnings would help drivers to avoid serious consequences. With regard to critical functions of warning symbols for risk communication, the present study focused on providing effective and easily perceivable symbols, compatible with human cognitive capabilities. Thus, the main purpose of the present study was to design and cognitively appraise 6 newly designed dynamic symbols, candidates for a new type of lane departure warning system. <b>Methods</b>: Simplicity, familiarity, concreteness, meaningfulness, and semantic closeness were the major assessment criteria, defining cognitive features by the earlier researchers in the field. A total number of 187 driving license applicants, with a mean age of 20.58 years (SD = 3.20), participated in the present survey. The participants rated cognitive features of the 6 dynamic symbols along a 0–100 scale. <b>Results</b>: Significant main effect of the element factor type of the designed symbols on rating cognitive features revealed that the existence of car element was the best predictor for illustrating lane departure. The interaction of both element factor and location of element factor significantly affected the ratings. However, the location of element factor did not solely have any strong effect on the ratings. The results also demonstrated that semantic closeness received the highest overall mean score across symbols (M = 61.80), especially within the symbols that include the car element (M = 75.67). Moreover, a significant difference was observed between the average ratings of the cognitive features, despite the fact that a significant correlation was found between cognitive features. <b>Conclusion</b>: The most considerable result of the current study was the match between the symbol with the highest ratings and the International Organization for Standardization (ISO)-related icon in appearance. Because previous studies demonstrated a strong correlation between comprehension scores of the symbol and both semantic closeness and meaningfulness, high-level comprehensibility of the best ranked symbol is expected.