cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7h3cuy
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Liolaemus parthenos Abdala, Baldo, Juárez & Espinoza, 2016"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040260-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7zsse2
title: Occurrence Download

description: A dataset containing 914 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "DecimalLatitude is greater than 29.1465935394048",
 "DecimalLatitude is less than 30.0882716909284",
 "DecimalLongitude is greater than -102.027399948732",
 "DecimalLongitude is less than -100.565406143834"
 ]
}

 The dataset includes 914 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000492-171020152545675/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.onjeol
title: Occurrence Download

description: A dataset containing 369 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Unknown evidence"
 ]
 },
 {
 "or" : [
 "Country is Chile",
 "Country is Argentina",
 "Country is Peru",
 "Country is Brazil",
 "Country is Colombia",
 "Country is Ecuador",
 "Country is Bolivia (Plurinational State of)"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Loasa Adans.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 369 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000146-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ceh8hr
title: Occurrence Download

description: A dataset containing 7895 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Camelus dromedarius Linnaeus, 1758"
 ]
}

 The dataset includes 7895 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012772-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.si9tu7
title: Occurrence Download

description: A dataset containing 2185 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macaca fascicularis (Raffles, 1821)"
 ]
}

 The dataset includes 2185 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000492-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r8bp8t
title: Occurrence Download

description: A dataset containing 30841074 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Costa Rica, Indonesia, Papua New Guinea)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 30841074 records from 3621 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0184089-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2u6v2
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, Pinnularia gibba, Pinnularia rostrata, Pinnularia subcapitata, Pinnularia subgibba, , Pinnularia viridiformis, , Placoneis, Placoneis dicephala, , , Planothidium, Achnanthes engelbrechtii, Planothidium frequentissimum, Pleurocapsa, Pleurosigma, Pleurosigma elongatum, Pleurosigma salinarum, Pleurotaenium, Quadrigula, , Reimeria, Reimeria uniseriata, Rhoicosphenia abbreviata, Rhoicosphenia, , Pyxidicula, Rivularia, Romeria, Roya, Scenedesmus, Scenedesmus quadricauda, Schizothrix, Scourfieldia, Scytonema, Scytonema crispum, Selenastrum, Sellaphora, Sellaphora pupula, Sellaphora seminulum, Sphaerocystis, Spirogyra reinhardii, Spirogyra, , Spirulina, Staurastrum, Staurodesmus, Stauroneis, Stauroneis anceps, , Staurosira construens, Staurosira, Fragilaria elliptica, Staurosirella pinnata, Staurosirella, Surirella, Stephanodiscus, Stephanodiscus agassizensis, Stichosiphon, Stigeoclonium, Stigeoclonium tenue, Stigonema, , Surirella brebissonii, Synechococcus, Tabellaria, Tabellaria flocculosa, Tabularia, Tabularia fasciculata, Tetraedriella, Tetraedron, Thalassiosira weissflogii, Thalassiosira, Tolypothrix, Trachelomonas, Trachelomonas intermedia, Trachelomonas volvocina, Trebouxia, Tribonema vulgare, Tribonema, Trichodesmium, Tryblionella, Tryblionella apiculata, Tryblionella calida, Tryblionella coarctata, Tryblionella hungarica, , Ulothrix, Ulothrix zonata, Zygnema, Zygnema pectinatum, Luticola, Cymbopleura, Achnanthes abundans, Aulacoseira subborealis, Botryococcus, Chlorococcum, Chroococcus minor, Euastrum)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.7576 -24.3688,20.529 -24.0715,20.509 -24.0715,20.509 -28.5786,25.5395 -28.5786,25.5395 -24.0715,25.1306 -24.0715,24.9333 -24.4571,23.8962 -24.2467,22.8065 -24.295,22.3719 -24.7207,22.2323 -25.547,22.0387 -25.7188,21.7833 -25.7784,21.5388 -25.7113,21.3553 -25.5415,20.7576 -24.3688))"
 ]
}

 The dataset includes 34 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020514-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28710710.v1
title: California <i>Zostera marina</i> X <i>Zostera pacifica</i> genome assembly and annotation

description: Accession: Zmar912-Mar1 (Mission Bay, scaffolded and haplotype resolved)Associated with NCBI BioProject PRJNA1237350 and publication xxx
DOI: 10.6084/m9.figshare.28710710
title: California <i>Zostera marina</i> X <i>Zostera pacifica</i> genome assembly and annotation

description: Accession: Zmar912-Mar1 (Mission Bay, scaffolded and haplotype resolved)Associated with NCBI BioProject PRJNA1237350 and publication xxx
DOI: 10.15468/dl.usu4m7
title: Occurrence Download

description: A dataset containing 3570 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Nilobezzia, Nychia limpida, Orthotrichia barnardi, Paracyamus, Simocephalus vetuloides, Stylaria fossularis, Stylaria, Pisidium costulosum, Slavina appendiculata, Cladotanytarsus capensis, Cladotanytarsus, Cryptochironomus subovatus, Dicrotendipes pilosimanus, Dicrotendipes, Pentaneura comosa, Cheumatopsyche thomasseti, Elpidelmis, Hydraena, Ochthebius, Cypria, Cypricercus, Micronecta winifreda, Paragomphus cognatus, Simulium harrisoni, Simulium hessei, Simulium impukane, Simulium merops, Afronurus harrisoni, Athripsodes bergensis, Atrichopogon victoriae, Caenis, Choroterpes nigrescens, Elporia barnardi, Oecetis modesta, Petroplax, Petrothrincus, Platychauliodes, Strina, Tricorythus discolor, Cladotanytarsus reductus, Polypedilum pruina, Cricotopus albitibia, Kribiocryptus flaviventris, Stenochironomus, Nanocladius vitellinus, Chaetocladius, Cricotopus bergensis, Thienemanniella antennata, Orthocladius bergensis, Stictochironomus puripennis, Stictochironomus, Rheotanytarsus fuscus, Polypedilum scotti, Stenochironomus pustulatus, Cricotopus scottae, Cardiocladius, Chironomus callichirus, Chironomus formosipennis, Tanytarsus pallidulus, Aprionyx tabularis, Clypeodytes, Petrothrincus circularis, Protodipseudopsis, Smittia atra, Corynoneura elongata, Thienemanniella trivittata, Corynoneura dewulfi, Pentapedilum anale, Thienemanniella lineola, Cryptochironomus lindneri, Polypedilum annulatum, Ephemerellina barnardi, Nymphula, Pentapedilum ruandae, Psectrocladius viridescens, Psectrocladius, Nanocladius brunneus, Corynoneura cristata, Stempellina, Burnupia capensis, Cloeon lacunosum, Glossiphonia disjuncta, Glossiphonia, Lestagella penicillata, Sigara contortuplicata, Aprionyx rubicundus, Agapetus, Batracobdella, Enithares chinai, Gerris zuqualanus, Gerris, , Helobdella, Marsupiobdella africana, Parecnomina resima, Parecnomina, Rhagovelia infernalis africana, Rhagovelia, Leptecho helicothecus, Leptecho)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((30.5701 -24.0715,25.5395 -24.0715,25.5395 -28.5786,30.5701 -28.5786,30.5701 -24.0715))"
 ]
}

 The dataset includes 3570 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020515-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uz2jga
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campanula rapunculoides",
 "Country is Guatemala",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020516-250827131500795/datasets/export for details.
DOI: 10.6084/m9.figshare.28710650
title: California <i>Zostera pacifica</i> genome assemblies and annotations

description: Accessions: Zpac1022-Sio2 (Matlahuayl SMR, scaffolded), Zpac1022-Sio1 (Matlahuayl SMR, unscaffolded)Associated with NCBI BioProject PRJNA1237350 and publication xxx
DOI: 10.6084/m9.figshare.28710650.v1
title: California <i>Zostera pacifica</i> genome assemblies and annotations

description: Accessions: Zpac1022-Sio2 (Matlahuayl SMR, scaffolded), Zpac1022-Sio1 (Matlahuayl SMR, unscaffolded)Associated with NCBI BioProject PRJNA1237350 and publication xxx
DOI: 10.6084/m9.figshare.28702679
title: California <i>Zostera marina</i> genome assemblies and annotations

description: Accessions: Zmar913-Mar3 (Mission Bay, scaffolded), Zmar1010- Tom3 (Tomales Bay, unscaffolded), Zmar1017-Elk1 (Elkhorn Slough, unscaffolded), Zmar108-Cre1 (Crescent City, unscaffolded), Zmar106-Eel1 (Eel River, unscaffolded), Zmar1015-Sfb1 (San Francisco Bay, unscaffolded), Zmar107-Hum1 (Humboldt Bay, unscaffolded)Associated with NCBI BioProject PRJNA1237350 and publication xxx
DOI: 10.6084/m9.figshare.28702679.v1
title: California <i>Zostera marina</i> genome assemblies and annotations

description: Accessions: Zmar913-Mar3 (Mission Bay, scaffolded), Zmar1010- Tom3 (Tomales Bay, unscaffolded), Zmar1017-Elk1 (Elkhorn Slough, unscaffolded), Zmar108-Cre1 (Crescent City, unscaffolded), Zmar106-Eel1 (Eel River, unscaffolded), Zmar1015-Sfb1 (San Francisco Bay, unscaffolded), Zmar107-Hum1 (Humboldt Bay, unscaffolded)Associated with NCBI BioProject PRJNA1237350 and publication xxx
DOI: 10.15468/dl.64dn2h
title: Occurrence Download

description: A dataset listing the 4 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Natalus mexicanus"
 ]
}

 The dataset's 4 records were derived from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020510-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zraxtf
title: Occurrence Download

description: A dataset containing 7758 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nelumbo nucifera"
 ]
}

 The dataset includes 7758 records from 268 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020517-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8vcbep
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campanula rapunculoides",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020518-250827131500795/datasets/export for details.
DOI: 10.6084/m9.figshare.29906153
title: <b>Bleomycin-induced lung fibrosis and dysfunction is exacerbated by G6PD deficiency</b>

description: Pulmonary fibrosis (PF) is a major cause of morbidity and mortality. Although increased oxidative stress and altered metabolism are implicated in PF pathobiology, our knowledge regarding the contribution of the glucose metabolism to the synthesis of extracellular matrix (ECM) is still incomplete. In the present study, our objective was to determine altered metabolic pathways that contribute to Bleomycin sulfate (BLM; 5 mg/kg)-induced PF in rats. We determined the effects of nebulized BLM on PF in CRISPR-edited rats expressing glucose-6-phosphate dehydrogenase (G6PD) variant (S188F; G6PD<sup>S188F</sup>) and their wild-type (WT) littermates. Unexpectedly, application of BLM decreased lung function in G6PD<sup>S188F</sup> rats as compared to their WT littermates. Masson’s Trichrome and Picrosirius Red staining revealed increased collagen in perivascular regions and around the airways and hydroxyproline within the lungs of G6PD<sup>S188F </sup>+ BLM as compared to WT + BLM rats. In addition, mass-spectrometry-based proteomics and spatial proteomics confirmed increased expression of pro-fibrotic proteins, including collagen1a1 and baculoviral IAP Repeat Containing 5, in the lungs of G6PD<sup>S188F </sup>+ BLM rats compared to WT + BLM rats. Furthermore, since BLM increased expression of KEAP1, this suggests that BLM inactivated NRF2 and increased oxidized glutathione, an indicator of oxidative stress that increases ECM, in lungs of G6PD<sup>S188F</sup> rats. Finally, unbiased metabolomics revealed down-regulated spermidine, a polyamine pathway metabolite that decreases BLM-induced collagen deposition, in the lungs of G6PD<sup>S188F </sup>+ BLM rats. Therefore, we propose that dysregulated ancillary polyamine pathway exacerbated BLM-induced synthesis of ECM-related proteins in G6PD<sup>S188F </sup>variant rats as compared to their WT littermates.
DOI: 10.6084/m9.figshare.29906153.v1
title: <b>Bleomycin-induced lung fibrosis and dysfunction is exacerbated by G6PD deficiency</b>

description: Pulmonary fibrosis (PF) is a major cause of morbidity and mortality. Although increased oxidative stress and altered metabolism are implicated in PF pathobiology, our knowledge regarding the contribution of the glucose metabolism to the synthesis of extracellular matrix (ECM) is still incomplete. In the present study, our objective was to determine altered metabolic pathways that contribute to Bleomycin sulfate (BLM; 5 mg/kg)-induced PF in rats. We determined the effects of nebulized BLM on PF in CRISPR-edited rats expressing glucose-6-phosphate dehydrogenase (G6PD) variant (S188F; G6PD<sup>S188F</sup>) and their wild-type (WT) littermates. Unexpectedly, application of BLM decreased lung function in G6PD<sup>S188F</sup> rats as compared to their WT littermates. Masson’s Trichrome and Picrosirius Red staining revealed increased collagen in perivascular regions and around the airways and hydroxyproline within the lungs of G6PD<sup>S188F </sup>+ BLM as compared to WT + BLM rats. In addition, mass-spectrometry-based proteomics and spatial proteomics confirmed increased expression of pro-fibrotic proteins, including collagen1a1 and baculoviral IAP Repeat Containing 5, in the lungs of G6PD<sup>S188F </sup>+ BLM rats compared to WT + BLM rats. Furthermore, since BLM increased expression of KEAP1, this suggests that BLM inactivated NRF2 and increased oxidized glutathione, an indicator of oxidative stress that increases ECM, in lungs of G6PD<sup>S188F</sup> rats. Finally, unbiased metabolomics revealed down-regulated spermidine, a polyamine pathway metabolite that decreases BLM-induced collagen deposition, in the lungs of G6PD<sup>S188F </sup>+ BLM rats. Therefore, we propose that dysregulated ancillary polyamine pathway exacerbated BLM-induced synthesis of ECM-related proteins in G6PD<sup>S188F </sup>variant rats as compared to their WT littermates.
DOI: 10.15468/dl.j3rfdg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, )",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020521-250827131500795/datasets/export for details.
DOI: 10.5281/zenodo.17042017
title: CNN-Based Model for 3D CME Parameter Prediction

description: This repository contains the dataset (images and metadata) used to produce the results in the paper 'CNN-Based Model for 3D CME Parameter Prediction: A Proof of Concept'.
DOI: 10.15468/dl.cyhrpw
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campanula rapunculoides",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020522-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hthgy8
title: Occurrence Download

description: A dataset containing 2355 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pteronotus mesoamericanus"
 ]
}

 The dataset includes 2355 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020523-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6crrs3
title: Occurrence Download

description: A dataset containing 2759 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hydrocotyle moschata"
 ]
}

 The dataset includes 2759 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020526-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r3ag7k
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, Pinnularia gibba, Pinnularia rostrata, Pinnularia subcapitata, Pinnularia subgibba, , Pinnularia viridiformis, , Placoneis, Placoneis dicephala, , , Planothidium, Achnanthes engelbrechtii, Planothidium frequentissimum, Pleurocapsa, Pleurosigma, Pleurosigma elongatum, Pleurosigma salinarum, Pleurotaenium, Quadrigula, , Reimeria, Reimeria uniseriata, Rhoicosphenia abbreviata, Rhoicosphenia, , Pyxidicula, Rivularia, Romeria, Roya, Scenedesmus, Scenedesmus quadricauda, Schizothrix, Scourfieldia, Scytonema, Scytonema crispum, Selenastrum, Sellaphora, Sellaphora pupula, Sellaphora seminulum, Sphaerocystis, Spirogyra reinhardii, Spirogyra, , Spirulina, Staurastrum, Staurodesmus, Stauroneis, Stauroneis anceps, , Staurosira construens, Staurosira, Fragilaria elliptica, Staurosirella pinnata, Staurosirella, Surirella, Stephanodiscus, Stephanodiscus agassizensis, Stichosiphon, Stigeoclonium, Stigeoclonium tenue, Stigonema, , Surirella brebissonii, Synechococcus, Tabellaria, Tabellaria flocculosa, Tabularia, Tabularia fasciculata, Tetraedriella, Tetraedron, Thalassiosira weissflogii, Thalassiosira, Tolypothrix, Trachelomonas, Trachelomonas intermedia, Trachelomonas volvocina, Trebouxia, Tribonema vulgare, Tribonema, Trichodesmium, Tryblionella, Tryblionella apiculata, Tryblionella calida, Tryblionella coarctata, Tryblionella hungarica, , Ulothrix, Ulothrix zonata, Zygnema, Zygnema pectinatum, Luticola, Cymbopleura, Achnanthes abundans, Aulacoseira subborealis, Botryococcus, Chlorococcum, Chroococcus minor, Euastrum)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.529 -24.0715,20.509 -24.0455,20.509 -24.0715,20.529 -24.0715))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020525-250827131500795/datasets/export for details.
DOI: 10.15468/dl.9sexs8
title: Occurrence Download

description: A dataset containing 3725 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Campanula rapunculoides",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3725 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020527-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8jw3j8
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Locality is Sierra Nevada De Santa Marta"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020528-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.