cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/1197c058ca1672c6f21bdd25d536e25a
title: MCR LTER: Coral Reef: Landscape-scale patterns of nutrient enrichment in a coral reef ecosystem: implications for coral to algae phase shifts, Adam et al., Ecol. Appl.

description: These data and analyses code were generated in support of the manuscript: Adam TC, Burkepile DE, Holbrook SJ, Carpenter RC, Claudet J, Loiseau C, Thiault L, Brooks, AJ, Washburn L, and RJ Schmitt, Ecological Applications We investigated the potential role of anthropogenic nutrient loading in driving recent coral-to-macroalgae phase shifts on reefs in the lagoons surrounding Moorea, French Polynesia. We used nitrogen (N) tissue content and stable isotopes (δ15N) in an abundant macroalga (Turbinaria ornata) together with empirical models of nutrient discharge to describe spatial and temporal patterns of nutrient enrichment in the lagoons. Turbinaria ornata were collected at 190 sites around Moorea in January, May, and August 2016. These sampling periods corresponded with distinct seasonal shifts in rainfall and wave forcing. Our results revealed that patterns of N enrichment were linked to rainfall, wave-driven circulation, and distance from anthropogenic nutrient sources, especially human sewage. In addition to describing high resolution patterns of N enrichment from 2016, we also analyzed core MCR time series on N tissue content in Turbinaria ornata from three habitats (fringing reef, back reef, and reef crest) at the six core MCR LTER sites between 2007 and 2013. These data showed that fringing reefs have been consistently enriched in N relative to back reefs, which are enriched relative to the reef crest. Further, these patterns mirror long-term patterns of nitrate and nitrite concentrations in the water column. We also analyzed core MCR time series on benthic communities and fishes and found that back reef sites that were consistently enriched in N between 2007 and 2013 experienced large increases in macroalgae while macroalgae remained much less abundant at back reef sites with lower N. These phase shifts to macroalgae occurred despite island-wide increases in the density and biomass of herbivorous fishes over the time period. Together, these results indicate that nutrient loading may be an important driver of coral-to-macroalgae phase shifts in the lagoons of Moorea even though the reefs harbor an abundant and diverse herbivore assemblage, emphasizing the important role that bottom-up factors can play in driving coral-to-macroalgae phase shifts.
DOI: 10.6073/pasta/f59968d039de006909c5c92c51c3919c
title: MCR LTER: Coral Reefs: Coral bleaching and mortality in July 2019; data for Speare et al. 2021 Global Change Biology

description: These data are from field surveys conducted at seven sites at 10m depth on the outer reef of Mo’orea following a marine heatwave and coral bleaching event in the Austral Summer of 2019. These data describe the size, percent of the colony that was bleached, and the percent of the colony that recently dead for corals in the genera Acropora and Pocillopora. At six sites (LTER 1-6) coral colony size was quantified using ordinal size bins and observers collected data on all coral colonies &gt; 5cm diameter. At one site on the north shore of Mo’orea (LTER Experimental Site) coral colony size was measured to the nearest centimeter. At this site researchers did two separate sets of surveys, one to collect data on all corals &gt; 5cm diameter, and one to collect data on all individuals ≤ 5cm diameter. Additionally, data on survivorship of newly-settled coral recruits on coral settlement tiles are included. Tiles were deployed at 10m depth at one site on the outer reef of Moorea. Survivorship of coral recruits between March and July was assessed in 2017 and 2019. These data are in support of a publication Speare et al. (2021) Global Change Biology. The manuscript title and author list are as follows: Size-dependent mortality of corals during marine heatwave erodes recovery capacity of a coral reef. Kelly E. Speare, Thomas C. Adam, Erin M. Winslow, Hunter S. Lenihan, Deron E. Burkepile This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 16-37396 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2021). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.
DOI: 10.6073/pasta/92e72c8c91056f4d89a11a1b67b2c373
title: MCR LTER: Coral Reef: Long-Term Coral Population and Community Dynamics: Annual Island Wide Coral Demography Survey 2011 ongoing

description: Demographic performance (recruitment, growth, and survival) are quantified annually for multiple individual colonies of the three most common genera (Acropora, Pocillopora, Porites) at both backreef and forereef sites. Each coral was tagged in 2011 and subsequently sampled again in 2012 to track colony growth and mortality dynamics. However, since 2013, investigators have transitioned to identifying coral through detailed mapping methodology and will continue to identify corals using this method in the subsequent years. The mapping system developed in 2013 provides data appropriate for detailed demographic study of coral on varying spatial scales around the island. This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 16-37396 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2019). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.
DOI: 10.5281/zenodo.5816245
title: 10 MHz WWV 10 MHz Doppler Recording, AD8Y

description: 10 MHz data collected by AD8Y during 2020 and 2021. Details at www.hamsci.org/grape1.
DOI: 10.6073/pasta/b170d82450ca0da224fdd2bc0e23d776
title: Climate Change Impacts for 14 Tree Species in Southwest Colorado

description: Forest management traditionally has been based on expectation of a steady climate. In the face of a changing climate, management requires projections of changes in the distribution of the climatic niche of the major species and strategies for applying the projections. We prepared climatic habitat models incorporating heatload as a topographic predictor for the 14 upland tree species of southwestern Colorado, USA, an area that has already seen substantial climate impacts. Models were trained with over 800,000 points of known presence and absence. Using 11 climate scenarios for the decade around 2060, we classified and mapped change for each species. Projected impacts are extensive. Except for the low-elevation woodland species, persistent habitat is rare. Most habitat is lost or threatened and is poorly compensated by emergent habitat. Three species may be locally extirpated. Nevertheless, strategies are described that can use the projections to apply management where it is likely to be most effective, to facilitate or assist migration, to favor species likely to be suited in the future, and to identify potential climate refugia.
DOI: 10.6084/m9.figshare.17776865
title: REMAP_annotated_data

description: This is the annotated data which is used in evaluation of REMAP.
DOI: 10.6084/m9.figshare.17776865.v1
title: annotated_data

description: This is annotated data which is used in evaluation of REMAP
DOI: 10.6084/m9.figshare.16728970
title: Long-distance lateral magma propagation and Pamir Plateau uplift

description: methods, figure S1-3 and table S1-3.<br>
DOI: 10.21227/h6ac-v946
title: Fringe Projection Pattern for Intraoral 3D Measurement 

description: Achieving digital intraoral impressions is a key step in orthodontic, implant, and repair. Compared with the complex and time-consuming traditional plaster impression method, the intraoral 3D scanner can obtain digital impressions in real time. However, because of the saliva, enamel, metallic denture, etc., the quality of the captured 2D image, which is used for feature measurement and 3D reconstruction, is usually degraded. Moreover, because of the limited field of view of intraoral scanners, bundles of individual point clouds need to be matched to obtain the full arch point cloud. It is time consuming to match the inaccurate point clouds and decreases the accuracy of the reconstructed full-arch dental model.
DOI: 10.34740/kaggle/dsv/3001676
title: NASA Project; Marine Debris Machine Learning
DOI: 10.20383/102.0405
title: Receiver phase alignment using fitted SVD derived sensitivities from routine prescans

description: Data files for: "Receiver phase alignment using fitted SVD derived sensitivities from routine prescans" This data is composed of three datasets of MR images provided prior to coil combination. This was acquired to investigate the Fitted SVD Method of coil combination which uses an SVD of a prescan to estimate coil sensitivities and fit them to a physically plausible basis. This allows for coil combination to be applied quickly throughout an imaging session and is targeted at combining the phase of large functional timeseries. These datasets allow for comparison of this method to existing methods, examine the method in an asymmetrical head coil, and examine how the proposed method responds to motion. All imaging parameters and the repository of code to run this method are provided in the README.txt.
DOI: 10.6084/m9.figshare.17089514.v1
title: Impact of delayed processing of positive blood cultures on organism detection

description: Dataset and STATA code underlying this project.
DOI: 10.6084/m9.figshare.17781842
title: Internship psychological flexibility at work

description: This data was collect from undergraduate internship students in a experimental study
DOI: 10.6084/m9.figshare.17781842.v1
title: Internship psychological flexibility at work

description: This data was collect from undergraduate internship students in a experimental study
DOI: 10.5281/zenodo.5813295
title: A low molecular weight Saccharina japonica polysaccharide suppresses high fat diet-induced obesity and enriches gut bacteria with fucoidan-degrading potential

description: This dataset contains 16S rRNA gene and metagenomic sequencing raw data involved in this study. Metagenomic data (S21H1887, S21H1888) were obtained from two cecal content samples from the LFD_J2H group due to<em> Akkermansia</em> uncultured bacterium was highly abundant in these samples. In addition, the code for JS divergence analysis is included.
DOI: 10.5281/zenodo.5813294
title: A low molecular weight Saccharina japonica polysaccharide suppresses high fat diet-induced obesity and enriches gut bacteria with fucoidan-degrading potential

description: This dataset contains 16S rRNA gene and metagenomic sequencing raw data involved in this study. Metagenomic data (S21H1887, S21H1888) were obtained from two cecal content samples from the LFD_J2H group due to<em> Akkermansia</em> uncultured bacterium was highly abundant in these samples. In addition, the code for JS divergence analysis is included.
DOI: 10.25345/c5jg3f
title: MassIVE MSV000088633 - GNPS 9-173 secondary metabolites_negative
title: Extracted secondary metabolites from unknown ginseng endophytes. Negative ionization mode.
DOI: 10.5281/zenodo.5802538
title: Remnants of the amalgamation of the East and West Cathaysia blocks revealed by a short-period dense seismic array

description: This is the data used to support relevant research, including the data of the teleseismic receiver function with the Gaussian factor of 10.0, which can be used to facilitate further relevant research.
DOI: 10.5281/zenodo.5802537
title: Remnants of the amalgamation of the East and West Cathaysia blocks revealed by a short-period dense seismic array

description: This is the data used to support relevant research, including the data of the teleseismic receiver function with the Gaussian factor of 10.0, which can be used to facilitate further relevant research.
DOI: 10.15468/dl.qjsqvs
title: Occurrence Download

description: A dataset containing 425 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Protea scolopendriifolia (Knight) Rourke"
 ]
}

 The dataset includes 425 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081266-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rpmjcv
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belarus",
 "TaxonKey is Argiope bruennichi (Scopoli, 1772)"
 ]
}

 The dataset includes 124 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081267-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x9qv7f
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Praravinia cauliflora Bremek."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081268-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5mjtjm
title: Occurrence Download

description: A dataset containing 4909 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lindera glauca (Siebold & Zucc.) Blume",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4909 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081269-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gwhe3x
title: Occurrence Download

description: A dataset containing 965 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Protea scolymocephala (L.) Reichard"
 ]
}

 The dataset includes 965 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081270-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rkgqkb
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Praravinia celebica Bremek."
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081271-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.84g7v6
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Laurus nobilis L.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081273-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pk2vfs
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Eucalyptus maidenii F.Muell.)"
 ]
}

 The dataset includes 103 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081272-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ra2tn
title: Occurrence Download

description: A dataset containing 396 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uncaria hirsuta Havil."
 ]
}

 The dataset includes 396 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081274-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jp72fr
title: Occurrence Download

description: A dataset containing 4117 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is MYS",
 "OccurrenceStatus is Present",
 "TaxonKey is Gallus Brisson, 1760"
 ]
}

 The dataset includes 4117 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081275-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7zngc5
title: Occurrence Download

description: A dataset containing 225 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Protea scorzonerifolia (Knight) Rycroft"
 ]
}

 The dataset includes 225 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081276-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c8q5uw
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Praravinia chalcotricha Bremek."
 ]
}

 The dataset includes 18 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081277-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.upxbat
title: Occurrence Download

description: A dataset containing 349531 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Herbario Nacional Colombiano (COL)"
 ]
}

 The dataset includes 349531 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081227-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u93jej
title: Occurrence Download

description: A dataset containing 179 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cercidiphyllum japonicum Siebold & Zucc.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 179 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081278-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25522873
title: Behavior and Energy of the M2 Internal Tide in the Madagascar–Mascarene Region

description: A multiple satellites survey about M2 internal tide in the Madagascar–Mascarene Region.
DOI: 10.15468/dl.6ypq32
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Praravinia coriacea Bremek."
 ]
}

 The dataset includes 13 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081280-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.75pj4v
title: Occurrence Download

description: A dataset containing 325 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Protea simplex E.Phillips"
 ]
}

 The dataset includes 325 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081279-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6pxr2t
title: Occurrence Download

description: A dataset containing 155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clematis florida Thunb.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 155 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081281-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z992zn
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Praravinia creaghii (Ridl.) Bremek."
 ]
}

 The dataset includes 38 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081282-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ckuspu
title: Occurrence Download

description: A dataset containing 834 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Protea speciosa (L.) L."
 ]
}

 The dataset includes 834 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081283-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wcajc7
title: Occurrence Download

description: A dataset containing 981163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fagus sylvatica L.",
 "Year 1801-2024"
 ]
}

 The dataset includes 981163 records from 1729 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081245-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1240269.09fu
title: SH1240269.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.