cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.jnay2r
title: Occurrence Download

description: A dataset containing 4338 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ostryopsis nobilis, Osyris lanceolata, Benkara griffithii, Benkara sinensis, Magnolia globosa)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4338 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031870-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/a52-858-p70
title: Argynnis paphia (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/jgh-26b-mya
title: Coranarta cordigera Thunberg, 1788

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/cdv-1dr-166
title: Udea lutealis Hübner, 1809

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/djq-34n-zby
title: Ochlodes Scudder, 1872

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.5066/p9fkariz
title: Grain-Size Analysis Data From Sediment Samples in Support of Oceanographic and Water-Quality Measurements in the Nearshore Zone of Matanzas Inlet, Florida, 2018

description: The interactions of waves and currents near an inlet influence sediment and alter sea-floor bedforms, especially during winter storms. As part of the Cross-Shore and Inlets Processes project to improve our understanding of cross-shore processes that control sediment budgets, the U.S. Geological Survey deployed instrumented platforms at two sites near Matanzas Inlet between January 24 and April 13, 2018. Matanzas Inlet is a natural, unmaintained inlet on the Florida Atlantic coast that is well suited for study of inlet and cross-shore processes. The study sites were offshore of the surf zone in a line perpendicular to the coast in water depth from 9 to 15 meters. An instrumented sea-floor platform was deployed at each site to measure ocean currents, wave motions, acoustic and optical backscatter, temperature, salinity, and pressure with an emphasis on quantifying the forcing for sediment transport and response near the seabed. Sonars mounted on the platform at the shallow site recorded how the sea-floor bedforms responded to forcing conditions. A surface buoy was deployed at each site; the larger buoy at the deeper site supported meteorological measurement of local atmospheric conditions during the study, and both buoys measured near-surface water temperature and salinity. Sediment samples were collected at the study sites to support these oceanographic and water-quality measurements, and grain size was analyzed for use in sediment transport models to compare predicted estimates of sediment resuspension and transport with observed estimates. Grain-size results are presented in phi and &amp;mu;M units.
DOI: 10.3535/c80-5hp-ecm
title: Acrobasis Zeller, 1839

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/f7r-hmj-az2
title: Perizoma albulata ([Denis & Schiffermüller], 1775)

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15468/dl.a5fu36
title: Occurrence Download

description: A dataset containing 692204 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Kazakhstan"
 ]
}

 The dataset includes 692204 records from 1081 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031792-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2bnh8z
title: Occurrence Download

description: A dataset containing 34347 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Locality is one of (Cape MAy, CAPE MAY, CAPE MAY CO, NEW JERSEY, USA, CApe may beach, CAPE MAY, 75 MI. E)",
 "StateProvince is New Jersey"
 ]
}

 The dataset includes 34347 records from 135 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028324-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.857cmj
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murina feae (Thomas, 1891)"
 ]
}

 The dataset includes 46 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028325-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txtwkd
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CatalogNumber is one of (CORD00018806CORD, CORD00014452CORD, CORD 00007809CORD, CORD 00008126CORD, CORD00034179CORD, CORD | CORD | CORD | CORD | CORD | CORD | CORD, CORD00018881CORD, CORD00055050CORD, CORD00014451CORD, CORD00018807CORD, CORD00015701CORD, CORD00088859CORD, CORD00079066CORD, CORD00083085CORD, CORD00055414CORD, CORD 00007541CORD)",
 "PublishingOrg is 7a6bdf66-ef5c-4a81-b731-2e328f4881eb"
 ]
}

 The dataset includes 16 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028326-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9656wy
title: Occurrence Download

description: A dataset containing 168 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diplodia pinea (Desm.) J.Kickx f."
 ]
}

 The dataset includes 168 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028327-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xyc36y
title: Occurrence Download

description: A dataset containing 5764 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Kosteletzkya pentacarpos (L.) Ledeb., Kosteletzkya depressa (L.) O.J.Blanch., Fryxell & D.M.Bates, Kosteletzkya reclinata Fryxell, Kosteletzkya ramosa Fryxell, Kosteletzkya tubiflora (DC.) O.J.Blanch. & Mc Vaugh, Kosteletzkya blanchardii Fryxell, Kosteletzkya hispidula (Spreng.) Garcke, Kosteletzkya buettneri Gürke ex Büttner)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 5764 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028328-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w73mu5
title: Occurrence Download

description: A dataset containing 1749 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bipinnula fimbriata (Poepp.) I.M.Johnst."
 ]
}

 The dataset includes 1749 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028329-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7g7tz3
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murina fusca Sowerby, 1922"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028330-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13644021
title: Data on changes in length, width, thickness, weight and displacement volume of blue mussel (Mytilus edulis) from the start to the end of the 13 week study in 2022.

description: This data file contains the on changes in blue mussel (Mytilus edulis) length, width, thickness, weight and displacement volume from the start to the end of a 13 week study in 2022. The mussels were kept in the NIVA mesocosm facility in the Oslofjord, three replicates in each of 12 basins. Half of the basins had high wave level, half had low wave level. The length of the mussels were measuerd weekly for 13 weeks. Alså the % change from one week to the next is included in the dataset.
DOI: 10.5281/zenodo.13644022
title: Data on changes in length, width, thickness, weight and displacement volume of blue mussel (Mytilus edulis) from the start to the end of the 13 week study in 2022.

description: This data file contains the on changes in blue mussel (Mytilus edulis) length, width, thickness, weight and displacement volume from the start to the end of a 13 week study in 2022. The mussels were kept in the NIVA mesocosm facility in the Oslofjord, three replicates in each of 12 basins. Half of the basins had high wave level, half had low wave level. The length of the mussels were measuerd weekly for 13 weeks. Alså the % change from one week to the next is included in the dataset.
DOI: 10.15468/dl.49dufm
title: Occurrence Download

description: A dataset containing 1802 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhaebo guttatus (Schneider, 1799)"
 ]
}

 The dataset includes 1802 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028332-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s53nns
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pteronia mucronata DC."
 ]
}

 The dataset includes 164 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028331-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3n3ke
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is ESTUDIO TÉCNICO DEL ÁREA DE CONSERVACIÓN MARINO-COSTERA TIQUISATE-TECOJATE, Registros Peces, tiburones y rayas"
 ]
}

 The dataset includes 37 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028333-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.8131122
title: WHiM-BC Dataset: Evolution of CSCs and non CSCs MCF-7 Migration in Wound Healing Assay

description: The WHiM-BC Dataset has been utilized to train Deep Learning models for the prediction of migration capabilities of MCF-7 cells, facilitated by the Predicting Wound Healing Progress Framework (PWPF).

The software can be accessed on GitHub: https://github.com/frangam/wound-healing.

Or you can download from Zenodo: https://doi.org/10.5281/zenodo.8130984

The dataset comprises two distinct parts:

MCF-7 Monolayer Cells: This part includes photographs of 12 different wells taken at 0h, 3h, 6h, 9h, 12h, 24h, and 27h, marking the final time of wound closure.

MCF-7 Spheres: This portion of the dataset mirrors the first, with images of 12 wells captured at the following time intervals: 0h, 3h, 6h, 9h, 12h, and 15h, indicating the closure time.

The dataset consists of a total of (127) for the MCF-7 Monolayer Cells and (126) for the MCF-7 Spheres, amounting to a sum of photographs from both parts.

 

If you utilize this tool in your research, please acknowledge it by citing the following reference:

@article{Garcia-Moreno-PWPF,  title={Using Deep Learning for Predicting the Dynamic Evolution of Breast Cancer Migration},  author={Garcia-Moreno, Francisco Manuel and Ruiz-Espigares, Jesus and Marchal, Juan Antonio and Gutierrez-Naranjo, Miguel Angel},  year={2024},  journal={Computers in Biology and Medicine},  doi={10.1016/j.compbiomed.2024.108890},  note={\url{https://authors.elsevier.com/tracking/article/details.do?aid=108890&jid=CBM&surname=Garcia-Moreno}}}

And also cite our MCF-7 Dataset used to train our software:

@misc{WHiM-BC_Dataset,  title={WHiM-BC Dataset: Evolution of CSCs and non CSCs MCF-7 Migration in Wound Healing Assay},  author={Garcia-Moreno, Francisco Manuel and Ruiz-Espigares, Jesus and Marchal, Juan Antonio and Gutiérrez-Naranjo, Miguel Ángel},  year={2023},  doi={10.5281/zenodo.8131123},  url={https://doi.org/10.5281/zenodo.8131123},  note = {version 1.0}}
DOI: 10.5281/zenodo.8131123
title: WHiM-BC Dataset: Evolution of CSCs and non CSCs MCF-7 Migration in Wound Healing Assay

description: The WHiM-BC Dataset has been utilized to train Deep Learning models for the prediction of migration capabilities of MCF-7 cells, facilitated by the Predicting Wound Healing Progress Framework (PWPF).

The software can be accessed on GitHub: https://github.com/frangam/wound-healing.

Or you can download from Zenodo: https://doi.org/10.5281/zenodo.8130984

The dataset comprises two distinct parts:

MCF-7 Monolayer Cells: This part includes photographs of 12 different wells taken at 0h, 3h, 6h, 9h, 12h, 24h, and 27h, marking the final time of wound closure.

MCF-7 Spheres: This portion of the dataset mirrors the first, with images of 12 wells captured at the following time intervals: 0h, 3h, 6h, 9h, 12h, and 15h, indicating the closure time.

The dataset consists of a total of (127) for the MCF-7 Monolayer Cells and (126) for the MCF-7 Spheres, amounting to a sum of photographs from both parts.

 

If you utilize this tool in your research, please acknowledge it by citing the following reference:

@article{Garcia-Moreno-PWPF,  title={Using Deep Learning for Predicting the Dynamic Evolution of Breast Cancer Migration},  author={Garcia-Moreno, Francisco Manuel and Ruiz-Espigares, Jesus and Marchal, Juan Antonio and Gutierrez-Naranjo, Miguel Angel},  year={2024},  journal={Computers in Biology and Medicine},  doi={10.1016/j.compbiomed.2024.108890},  note={\url{https://authors.elsevier.com/tracking/article/details.do?aid=108890&jid=CBM&surname=Garcia-Moreno}}}

And also cite our MCF-7 Dataset used to train our software:

@misc{WHiM-BC_Dataset,  title={WHiM-BC Dataset: Evolution of CSCs and non CSCs MCF-7 Migration in Wound Healing Assay},  author={Garcia-Moreno, Francisco Manuel and Ruiz-Espigares, Jesus and Marchal, Juan Antonio and Gutiérrez-Naranjo, Miguel Ángel},  year={2023},  doi={10.5281/zenodo.8131123},  url={https://doi.org/10.5281/zenodo.8131123},  note = {version 1.0}}
DOI: 10.15468/dl.cvk7py
title: Occurrence Download

description: A dataset containing 725 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC0 1.0, CC-BY 4.0)",
 "TaxonKey is Anthophora abrupta Say, 1837"
 ]
}

 The dataset includes 725 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028335-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ed7cu
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pteronia rangei Muschl."
 ]
}

 The dataset includes 22 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028337-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gx689g
title: Occurrence Download

description: A dataset containing 238 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Roepera lichtensteiniana (Cham.) Beier & Thulin"
 ]
}

 The dataset includes 238 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028338-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bba9nc
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zygophyllum lichtensteinianum Cham."
 ]
}

 The dataset includes 19 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028339-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc4lg5b
title: CCDC 136901: Experimental Crystal Structure Determination

description: Related Article: S.I.Troyanov, L.A.Lapkina, V.E.Larchenko, A.Yu.Tsivadze|1999|Dokl.Akad.Nauk SSSR|367|644|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc66fqj
title: CCDC 184937: Experimental Crystal Structure Determination

description: Related Article: R.K.Murmann, C.L.Barnes|2004|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.3gchs2
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is CHECKLIST OF BIRDS AT HELL’S GATE NATIONAL PARK, NAIVASHA, NAKURU COUNTY - KENYA"
 ]
}

 The dataset includes 164 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028343-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13831365
title: raw data for "Elucidating ATP's Role as Solubilizer of Biomolecular Aggregate"

description: It contains 4 raw trajectories corresponding to the two proteins Trp-cage (prod_trpcage_ATP0M_REMD_303K_a99SBdisp.xtc and prod_trpcage_ATP0M_REMD_303K_a99SBdisp.xtc) and Aβ40 (prod_trpcage_ATP0M_REMD_303K_a99SBdisp.xtc) proteins in absence and in presence of ATP (0.5 M). The replica exchange molecular dynamics trajectories corresponding to 303 K temperature have been included for each cases. The trajectory (.xtc) and topology (.tpr) files are labeled as "prod_protein-name_ATP-concentration_simulation_temperature_forcefield".

The raw data employed in constructing each of the plots provided in manuscript are included in the respective zip files.The data corresponding to the experimental results are included in the associated zip file, named according to the specific figure referenced in the manuscript. Also some GROAMCS command lines are also provided in the respective data files. For any further inquiries or requests for additional data, please contact jmondal@tifrh.res.in.
DOI: 10.15468/dl.rm8a2x
title: Occurrence Download

description: A dataset containing 378 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhigozum trichotomum Burch."
 ]
}

 The dataset includes 378 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028344-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.epkht3
title: Occurrence Download

description: A dataset containing 7734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-74.52689 39.29551,-74.90574 39.33694,-74.9908 38.92992,-74.85191 38.90922,-74.52689 39.29551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Calidris canutus (Linnaeus, 1758)",
 "Year is greater than or equal to 2014"
 ]
}

 The dataset includes 7734 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028347-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aqvu7h
title: Occurrence Download

description: A dataset containing 7734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-74.52689 39.29551,-74.90574 39.33694,-74.9908 38.92992,-74.85191 38.90922,-74.52689 39.29551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Calidris canutus (Linnaeus, 1758)",
 "Year is greater than or equal to 2014"
 ]
}

 The dataset includes 7734 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028345-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ssa7gj
title: Occurrence Download

description: A dataset containing 2622 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lutjanus erythropterus Bloch, 1790"
 ]
}

 The dataset includes 2622 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028348-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xvdddh
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is CHECKLIST OF BIRDS AT HELL’S GATE NATIONAL PARK, NAIVASHA, NAKURU COUNTY - KENYA"
 ]
}

 The dataset includes 164 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028350-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2rgukq
title: Occurrence Download

description: A dataset containing 379 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rogeria longiflora (D.Royen) J.Gay ex DC."
 ]
}

 The dataset includes 379 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028349-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.