cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.20350/digitalcsic/14763
title: Data of manuscript Adaptation of Saccharomyces species to high-iron conditions

description: The dataset is made available under the Open Database License. Any rights in individual contents of the database are licensed under the Database Contents License. Please, read the full ODbL 1.0 license text for the exact terms that apply. Users of the dataset are free to: Share: copy, distribute and use the database, either commercially or non-commercially. Create: produce derivative works from the database. Adapt: modify, transform and build upon the database. Under the following conditions: Attribution: You must attribute any public use of the database, or works produced from the database. For any use or redistribution of the database, or works produced from it, you must make clear to others the license of the original database. Share-Alike: If you publicly use any adapted version of this database, or works produced from an adapted database, you must also offer that adapted database under the ODbL.
description: Abstract: Iron is an indispensable element that participates as an essential cofactor in multiple biological processes. However, when present in excess, iron can engage in redox reactions that generaten reactive oxygen species that damage cells at multiple levels. In this report, we have characterized the response of budding yeast species from the Saccharomyces genus to elevated environmental iron concentrations. We have observed that S. cerevisiae strains are more resistant to high-iron concentra tions than Saccharomyces non-cerevisiae species. Liquid growth assays showed that species evolu tively closer to S. cerevisiae, such as S. paradoxus, S. jurei, S. mikatae, and S. arboricola were more resistant to high iron levels than the more distant species S. eubayanus and S. uvarum. Remarkably, S. kudriavzevii strains were especially iron sensitive. Growth assays in solid media suggested that S. cerevisiae and S. paradoxus were more resistant to the oxidative stress caused by elevated iron concentrations. When comparing iron accumulation and sensitivity, different patterns were observed. As previously described for S. cerevisiae, S. uvarum and particular strains of S. kudriavzevii and S. paradoxus became more sensitive to iron while accumulating more intracellular iron levels. However, no remarkable changes in intracellular iron accumulation were observed for the rest of the species. Consistent with the activation of iron detoxification systems, an increased expression of the vacuolar iron transporter CCC1 was observed for iron-sensitive strains with high endogenous iron levels. These results indicate that different mechanisms of response to elevated iron concentrations exit in the different species of the genus Saccharomyces.
DOI: 10.20350/digitalcsic/14707
title: NMR dataset of Organic Chemistry Frontiers 2022 (manuscript QO-RES-07-2022-001099)

description: Proton and carbon-13 nuclear magnetic resonance (1H NMR or 13C NMR) spectra were recorded on a Bruker Avance III-400 (400 and 100 MHz, respectively) or a Varian System 500 (500 and 125 MHz, respectively) spectrometers. Chemical shifts are expressed in parts per million (? scale) downfield from tetramethylsilane and are referenced to residual peaks of the deuterated NMR solvent used. Weighted Fourier transform and phase and baseline adjustment processing using the program MestReNova version 14.1.2-25024
description: Current methods for the preparation of functional small-molecule fluorophores generally require labor-intensive, multi-step synthetic routes for all the major chromophore groups. In spite of recent significant contributions from numerous laboratories, the paucity of rapid, straightforward and wide-scope synthetic strategies in this field is limiting the development of advanced probes for bioimaging, sensing and therapeutic applications. We describe herein a general and robust methodology for the one-step fluorescent labeling of a wide variety of molecules having C-, N-, P-, O-, S-, or halide-nucleophilic centers, using stable and readily available acetoxymethyl-BODIPYs as reagents in the presence of an acid catalyst. This modular methodology allows a very facile preparation of mono- and di-functional probes incorporating a broad assortment of biomolecules, enzyme cofactors, natural products, and other chromophores, as well as chemical functionalities for a wide range of applications including bioorthogonal conjugation, polymerization, and supramolecular chemistry, among others. The photophysical properties and preliminary applications of the new probes in live-cell imaging were also studied. The described strategy enables the high-throughput engineering of novel BODIPY dyes with diverse functionalities for basic and applied science with potential for innovative technological applications.
DOI: 10.20350/digitalcsic/14717
title: Dataset of Cantabrian Mountains insects
title: Stuck on top of a mountain: consequences of dispersal limitations for alpine diversity. Dataset
DOI: 10.20350/digitalcsic/15467
title: DroughtIndexDatabaseSpain

description: datos geoespaciales en rejilla
description: [EN] This database provides information about drought conditions in Spain from 1961 from different drought indices (SPEI, SPI, SPDI, SCPDSI, SCPHDI, SCWPLM, SCZINDEX) with a 1.1km spatial resolution and a weekly time resolution. The database is updated annually.
description: [ES] Esta base de datos ofrece informaci??n hist??rica sobre las condiciones de sequ??a desde 1961, de acuerdo a diferentes ??ndices de sequ??a (SPEI, SPI, SPDI, SCPDSI, SCPHDI, SCWPLM, SCZINDEX), a una resoluci??n espacial de 1.1 km y una resoluci??n temporal semanal. Esta informaci??n se actualiza anualmente
DOI: 10.20350/digitalcsic/15433
title: FT-IR spectra of selected NADES and their components (L-menthol and formic acid) associated to Figures S1 (in CSV) of the paper "Hydrophobic natural deep eutectic solvents based on L-menthol as supported liquid membrane for hollow fiber liquid-phase microextraction of triazines from water and urine samples" to be published in Talanta

description: In this work, the use of a hydrophobic natural deep eutectic solvent (NADES) as supported liquid membrane (SLM) for hollow fiber liquid-phase microextraction (HF-LPME) of triazines is proposed. The combination of formic acid:L-menthol (2:1) was selected as optimum. FT-IR spectra of selected NADES and its components associated to Fig. S1 of paper submitted to Talanta are provided as csv files as follow: FigS1 (menthol); FigS1 (formic acid); FigS1 /NADES).
description: FigS1 (menthol)_D??az-??lvarez, Turiel and Mart??n-Esteban_Talanta.csv, FigS1 (formic acid)_D??az-??lvarez, Turiel and Mart??n-Esteban_Talanta.csv, FigS1 (NADES)_D??az-??lvarez, Turiel and Mart??n-Esteban_Talanta.csv
DOI: 10.20350/digitalcsic/14561
title: Effects of temperature on the bioenergetics of the marine protozoans Gyrodinium dominans and Oxyrrhis marina [Dataset]

description: We aimed at studying the mechanisms underneath the ascending and descending sections of the thermal performance curves in marine protozoans. To do so, we exposed Gyrodinium dominans and two strains of Oxyrrhis marina from different origins to three temperatures representative of each section of the thermal response curve (12??C, ascending section; 18??C, top; 25??C, descending section). As variables, we measured growth, ingestion, and respiration rates (this latter with and without food). The growth rates of O. marina strains plotted as a function of temperature showed a triangular response with maximum values at the intermediate temperature. However, G. dominans showed similar growth rates at 12 and 18??C, and even if showed a marked decrease in growth rates at 25??C, this was not significant. Ingestion rates were higher at 18??C for all the strains. The respiration rates of G. dominans were unaffected by temperature, but the respiration rates of both O. marina strains increased with temperature. The specific dynamic action produced by feeding activity ranged from 2 to 20% of the daily carbon ingestion for all organisms investigated. The calculated energetic budget indicated that the responses to temperature were diverse, even within strains of the same species. G. dominans maintained similar growth at all temperatures by balancing anabolism and catabolism functions. In O. marina strains, on the other hand, the decrease in growth rates at the lowest temperature was driven mainly by reduced ingestion rates. However, increased respiration seemed the primary factor affecting the decrease in growth rates at the highest temperature. These results are discussed in the light of previous studies and on its suitability to understand the response of wild organisms to fluctuations in temperature
description: Para 3 especies de protozoos marino: Tasa de respiraci??n con y sin comida (??mol O2/ind/h), Tasa crecimiento (?? 1/d), Tasa de ingestion (cells/ind/d), Eficiencia bruta de crecimiento (GGE, %)
DOI: 10.20350/digitalcsic/15658
title: Analysis of Kkv trafficking [Dataset]

description: All images are single confocal sections except A-C, which are projections of confocal sections. (A, A???) In trachea of wild-type embryos, Kkv is present in the apical region (blue arrows) and in intracellular vesicles (yellow arrowheads). (B) In kkv mutants unable to polymerise chitin, Kkv is not properly localised. (C) GFP-Kkv localises to the apical region (blue arrows) and in intracellular vesicles (yellow arrowheads). (D) When reb and GFP-kkv are coexpressed in salivary glands, Kkv is present in the apical membrane (blue arrow), in intracellular vesicles (yellow arrowhead), and also in punctae in the lumen (pink arrowheads). This is clearly observed in orthogonal sections (D???). (E) These luminal punctae corresponded to membranous structures. (F, F???) In contrast, when GFP-kkv is expressed alone, luminal punctae are absent, and Kkv is only found apically (blue arrow) and in intracellular vesicles (yellow arrowhead). (G) Luminal punctae (pink arrowheads) are also observed in the trachea of embryos overexpressing reb and GFP-kkv. (H) When endocytosis is prevented, the coexpression of reb and GFP-kkv in salivary glands still leads to formation of Kkv luminal punctae (pink arrowheads). (I) Quantifications of the number of intracellular Kkv vesicles in salivary glands when expressing GFP-kkv (I???), reb and GFP-kkv (I???), and GFP-kkv??CC. n is the number of salivary glands analysed. The underlying data for quantifications can be found in the S1 Data. Scale bars: 10 ??m.
DOI: 10.20350/digitalcsic/15713
title: The provenance of the stones in the Menga dolmen reveals one of the greatest engineering feats of the Neolithic [dataset]

description: 2 tablas de Excel
DOI: 10.20350/digitalcsic/15434
title: Chromatographic data for the determination of triazines in water and urine samples associated to Figures 6 and 7 (in CSV) of the paper "Hydrophobic natural deep eutectic solvents based on L-menthol as supported liquid membrane for hollow fiber liquid-phase microextraction of triazines from water and urine samples" to be published in Talanta

description: In this work, the use of a hydrophobic natural deep eutectic solvent (NADES) as supported liquid membrane (SLM) for hollow fiber liquid-phase microextraction (HF-LPME) of triazines is proposed. The combination of formic acid:L-menthol (2:1) was selected as optimum. The optimized HF-LPME procedure was applied to the analysis of an artificial water containing humic acids, tap and river water, and urine samples by HPLC with UV detection at 268 nm. The chromatographic data associated to Fig.6 and 7 of paper submitted to Talanta are provided as csv files as follows: Fig6a: Milli-Q water; Fig6b; artificial water; Fig7a: Tap water; Fig7b: River water; Fig7c: Urine river. All the samples were spiked with selected sulfonamides at 5 ??g/L concentration level.
description: Fig6a_D??az-??lvarez_Turiel and Mart??n-Esteban_Talanta.csv, Fig6b_D??az-??lvarez_Turiel and Mart??n-Esteban_Talanta.csv, Fig7a_D??az-??lvarez_Turiel and Mart??n-Esteban_Talanta.csv, Fig7b_D??az-??lvarez_Turiel and Mart??n-Esteban_Talanta.csv, Fig7c_D??az-??lvarez_Turiel and Mart??n-Esteban_Talanta.csv
DOI: 10.20350/digitalcsic/15466
title: NDVISpainDatabase

description: Datos geoespaciales del ??ndice de vegetaci??n de diferencia normalizado (NDVI) de alta resoluci??n espacial (1.1 km) para la Espa??a peninsular y Baleares con una resoluci??n temporal quincenal (1981-2015).
description: [EN] NDVISpainDatabase is a high-resolution (1.1 km) Normalized Difference Vegetation Index dataset for the peninsular Spain and the Balearic Islands. This dataset covers from 1981 to 2015 with a biweekly time resolution.
description: [ES] NDVISpainDatabase es una base de datos del ??ndice de vegetaci??n de diferencia normalizado de alta resoluci??n espacial (1.1 km) para la Espa??a peninsular y Baleares. La base de datos cubre el periodo 1981-2015 con una resoluci??n temporal quincenal.
DOI: 10.20350/digitalcsic/15572
title: Dataset of the publication ???Cellular and Molecular Processes Are Differently Influenced in Primary Neural Cells by Slight Changes in the Physicochemical Properties of Multicore Magnetic Nanoparticles???

description: [EN] Herein, we use two exemplary superparamagnetic iron oxide multicore nanoparticles (SPIONs) to illustrate the significant influence of slightly different physicochemical properties on the cellular and molecular processes that define SPION interplay with primary neural cells. Particularly, we have designed two different SPION structures, NFA (i.e., a denser multicore structure accompanied by a slightly less negative surface charge and a higher magnetic response) and NFD (i.e., a larger surface area and more negatively charged), and identified specific biological responses dependent on SPION type, concentration, exposure time, and magnetic actuation. Interestingly, NFA SPIONs display a higher cell uptake, likely driven by their less negative surface and smaller protein corona, more significantly impacting cell viability and complexity. The tight contact of both SPIONs with neural cell membranes results in the significant augmentation of phosphatidylcholine, phosphatidylserine, and sphingomyelin and the reduction of free fatty acids and triacylglycerides for both SPIONs. Nonetheless, NFD induces greater effects on lipids, especially under magnetic actuation, likely indicating a preferential membranal location and/or a tighter interaction with membrane lipids than NFA, in agreement with their lower cell uptake. From a functional perspective, these lipid changes correlate with an increase in plasma membrane fluidity, again larger for more negatively charged nanoparticles (NFD). Finally, the mRNA expression of iron-related genes such as Ireb-2 and Fth-1 remains unaltered, while Tf R-1 is only detected in SPION-treated cells. Taken together, these results demonstrate the substantial impact that minor physicochemical differences of nanomaterials may exert in the specific targeting of cellular and molecular processes. A denser multicore structure generated by autoclave-based production is accompanied by a slight difference in surface charge and magnetic properties that become decisive for the biological impact of these SPIONs. Their capacity to markedly modify the lipidic cell content makes them attractive as lipid-targetable nanomedicines.
description: EDX_NFA (dat); EDX_NFD (dat); FTIR_NFA_NFD (dat); NFA_Mag_RT (dat); NFD_Mag_RT (dat); Results_CultureAfterSuspension (xls); Results_Hyperthermia (xls); Results_Lipidomics (xls); Results_qPCR (xls); RX_NFA (png); Flow cytometry dataset (pdf); ReportFile (word)
DOI: 10.20350/digitalcsic/15463
title: MSED (Monthly Streamflow European Dataset)

description: Series temporales mensuales de caudal.
description: [EN] This dataset includes series of monthly streamflow of 3224 gauging stations throughout Europe with reconstructed data for the period 1962-2017.
description: [ES] Base de datos de caudal mensual de 3224 estaciones de aforo a lo largo de Europa con datos reconstruidos para el periodo 1962-2017.
DOI: 10.20350/digitalcsic/15461
title: INDECIS (European Climate Indices Data Set)

description: [EN] It contains a netCDF file which needs specific data analysis software. [ES] Contiene un fichero netCDF que necesita software de an??lisis de datos espec??fico.
description: [EN] It is a gridded dataset for the whole of Europe, which employed a set of 125 climate indices from 1950. Climate indices were computed at different temporal scales (i.e. monthly, seasonal and annual) and mapped at a grid interval of 0.25??.
description: [ES] Es una rejilla de 125 ??ndices clim??ticos con una resoluci??n espacial de 0.25 grados calculados para toda Europa desde 1950. Los ??ndices clim??ticos han sido calculados a diferentes escalas temporales (mensual, estacional y anual).
DOI: 10.20350/digitalcsic/15083
title: Data from: Spatial dynamics and mixing of bluefin tuna in the Atlantic Ocean and Mediterranean Sea revealed using next generation sequencing

description: [Usage Notes] Puncher et al_Thunnus thynnus_95loci_723individuals_27samples Puncher et al_Thunnus thynnus_221loci_167individuals_9samples Puncher et al_Thunnus thynnus_384 SNPs with flanking sequences "Puncher et al_Thunnus thynnus_384 SNPs with flanking sequences.txt" contains the flanking sequences of 384 SNPs discovered using reduced representation sequence libraries, 221 of which passed quality criteria and 95 that were used for population structure analysis.
description: The Atlantic bluefin tuna is a highly migratory species emblematic of the challenges associated with shared fisheries management. In an effort to resolve the species??? stock dynamics, a genome-wide search for spatially informative single nucleotide polymorphisms (SNPs) was undertaken, by way of sequencing reduced representation libraries. An allele frequency approach to SNP discovery was used, combining the data of 555 larvae and young-of-the-year (LYOY) into pools representing major geographical areas and mapping against a newly assembled genomic reference. From a set of 184,895 candidate loci, 384 were selected for validation using 167 LYOY. A highly discriminatory genotyping panel of 95 SNPs was ultimately developed by selecting loci with the most pronounced differences between western Atlantic and Mediterranean Sea LYOY. The panel was evaluated by genotyping a different set of LYOY (n= 326) and from these 77.8% and 82.1% were correctly assigned to western Atlantic and Mediterranean Sea origins, respectively. The panel revealed temporally persistent differentiation among LYOY from the western Atlantic and Mediterranean Sea (FST = 0.008, p=0.034). The composition of six mixed feeding aggregations in the Atlantic Ocean and Mediterranean Sea was characterized using genotypes from medium (n = 184) and large (n = 48) adults, applying population assignment and mixture analyses. The results provide evidence of persistent population structuring across broad geographic areas and extensive mixing in the Atlantic Ocean, particularly in the mid-Atlantic Bight and Gulf of St. Lawrence. The genomic reference and genotyping tools presented here constitute novel resources useful for future research and conservation efforts.
DOI: 10.20350/digitalcsic/15462
title: ECTACI (European Climate Atlas)

description: [EN] It contains a netCDF file which needs specific data analysis software. [ES] Contiene un fichero netCDF que necesita software de an??lisis de datos espec??fico.
description: [EN] ECTACI database contains four statistical parameters (climatology, coefficient of variation, slope, and significant trend) from 125 standard climate indices for the whole Europe at 0.25?? grid intervals from 1979 to 2017 at various temporal scales (monthly, seasonal, and annual).
description: [ES] La base de datos ECTACI proporciona cuatro par??metros estad??sticos (climatolog??a, coeficiente de variaci??n, pendiente y significatividad de tendencia) de 125 ??ndices clim??ticos para toda Europa con una resoluci??n espacial de 0.25 grados desde 1979 a 2017 a tres escalas temporales (mensual, estacional y anual).
DOI: 10.20350/digitalcsic/15454
title: SEDIDatabase

description: [EN] It contains a netCDF file which needs specific data analysis software. [ES] Contiene un fichero netCDF que necesita software de an??lisis de datos espec??fico.
description: [EN] This dataset includes series of the Standardized Evapotranspiration Deficit at 0.25?? spatial resolution and monthly time resolution at global scale from 1980.
description: [ES] Esta base de datos proporciona el Standardized Evapotranspiration Deficit Index a escala global con una resoluci??n espacial de 0.25 grados y una resoluci??n temporal mensual desde 1980.
DOI: 10.20350/digitalcsic/15472
title: Monitordesequ??ameteorol??gica

description: datos geoespaciales en rejilla sobre sequ??a
description: [EN] This dataset offers near real-time information about drought conditions in Spain with a 1.1 km spatial resolution and a weekly time resolution. SPI and SPEI (time-scales 1, 3, 6, 9, and 12 month), drought duration and magnitude are provided from 1955 until today. The dataset is updated four times each month.
description: [ES] Esta dataset proporciona informaci??n en tiempo cuasi real de las condiciones de sequ??a en Espa??a a resoluci??n temporal semanal y espacial de 1.1 km. Proporcionan los valores de SPI y SPEI a diferentes escalas temporales (1, 3, 6, 9 y 12) as?? como la duraci??n y la magnitud de las sequ??as desde 1961 hasta la actualidad. La dataset se actualiza cuatro veces cada mes.
DOI: 10.20350/digitalcsic/15468
title: SPEIDroughtMonitor

description: [EN] It contains a netCDF file which needs specific data analysis software. [ES] Contiene un fichero netCDF que necesita software de an??lisis de datos espec??fico.
description: [EN] The dataset offers near real-time information about drought conditions at the global scale, with a 1 degree spatial resolution and a monthly time resolution. SPEI time-scales between 1 and 48 months are provided from 1955. The dataset is updated during the first days of the following month based on the most reliable and updated sources of climatic data.
description: [ES] El dataset proporciona informaci??n en tiempo cuasi real sobre las condiciones de sequ??a en el mundo a resoluci??n temporal mensual y espacial de 1 grado. Proporcionan los valores del SPEI desde 1955 hasta la actualidad a las escalas temporales de 1 a 48 meses. El dataset se actualiza en los primeros d??as del mes siguiente en base a las fuentes de datos clim??ticos m??s fiables y actualizadas.
DOI: 10.20350/digitalcsic/15469
title: SPEICropDroughtMonitor

description: datos geoespaciales en rejilla de SPEI
description: [EN] This dataset provides near real-time information about drought conditions in regions where corn, wheat, barley, soybeans and cotton are grown with a 0.5 degrees spatial resolution and a weekly time resolution. SPEI time-scales between 0.5 and 48 months are provided from 1979.
description: [ES] La dataset presenta informaci??n en tiempo cuasi real de las condiciones de sequ??a en las regiones del mundo donde se cultiva ma??z, trigo, cebada, soja y algod??n a resoluci??n temporal semanal y espacial de 0.5 grado. Se proporcionan los valores de SPEI a escalas temporales de 0.5 a 48 meses desde 1979.