cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13161552
title: Additional file 16 of TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L

description: Additional file 16: Table S9 TCGA BRCA Sample. TCGA BRCA Samples used for differential expression analysis (Amplfied vs Wildtype).
DOI: 10.6084/m9.figshare.13161582
title: Additional file 9 of TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L

description: Additional file 9: Table S3 NHA Differential expression analyses. A) Differentially expressed genes: NHA CIC Wildtype vs CIC knockout. B) Differentially expressed genes: NHA ATXN1L wildtype vs ATXN1L knockout.
DOI: 10.6084/m9.figshare.13161582.v1
title: Additional file 9 of TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L

description: Additional file 9: Table S3 NHA Differential expression analyses. A) Differentially expressed genes: NHA CIC Wildtype vs CIC knockout. B) Differentially expressed genes: NHA ATXN1L wildtype vs ATXN1L knockout.
DOI: 10.21227/c993-mg77
title: naive prediction 2.0

description: Use timeslot condensed data
DOI: 10.17632/rmznfvg2v4.1
title: Data for: Quantitative assessment of the relative tectonic activity using the analytical hierarchy process in the northwestern margin of the Lut Block, Central Iran

description: The Kuh-e-Sarhangi faults data in Neogene units which we have used to analyze the Neogene paleostress field in the Lut block in Central Iran
DOI: 10.17632/4k58d37twk.1
title: Data for: The 1.14 Ga mafic intrusions in the SW Yangtze Block, South China: Records of late Mesoproterozoic intraplate magmatism

description: Table 1. LA-ICP-MS zircon U-Pb data of diabase samples CK04-01 and CK24-11 from the Cuoke area, SW Yangtze Block. Table 2. In-situ zircon REE contents (ppm) of diabase samples CK04-01 and CK24-11 from the Cuoke area, SW Yangtze Block. Table 3. Zircon Lu-Hf isotopic compositions of diabase samples CK04-01 and CK24-11 from the Cuoke area, SW Yangtze Block. Table 4. Whole-rock major (wt.%) and trace element (ppm) data of the diabase samples from the Cuoke area, SW Yangtze Block. Table 5. Whole-rock Sm-Nd isotopic compositions of the diabase samples from the Cuoke area, SW Yangtze Block.
DOI: 10.17632/4287vzd4k7.1
title: Data for: How to effectively use long-term remotely sensed data to characterize the process of trees and shrubs encroachment for open protected wetlands in the Biebrza National Park.

description: The study area of 245 km2 was divided into 16,158 squares (SQ) in the spatial matrix with a grid cell of 125 x 125 m. Each of the SQ had the tree and shrub mean percentage coverage (MPC) assigned as a result of automatic analysis of the identification of tree and shrub coverage in 2015 year, and starting from 1966 year and ending in 2010 year as a result of manual image interpretation.
DOI: 10.6084/m9.figshare.13161623.v1
title: Additional file 8 of Cross-cultural adaptation and validation of the Dutch language version of the Pictorial Fear of Activity Scale – Cervical

description: Additional file 8. Data PFActS-C-DLV.
DOI: 10.6084/m9.figshare.13161626
title: Additional file 9 of Cross-cultural adaptation and validation of the Dutch language version of the Pictorial Fear of Activity Scale – Cervical

description: Additional file 9. Data translation and cross-cultural adaptation.
DOI: 10.6084/m9.figshare.13161623
title: Additional file 8 of Cross-cultural adaptation and validation of the Dutch language version of the Pictorial Fear of Activity Scale – Cervical

description: Additional file 8. Data PFActS-C-DLV.
DOI: 10.6084/m9.figshare.13161626.v1
title: Additional file 9 of Cross-cultural adaptation and validation of the Dutch language version of the Pictorial Fear of Activity Scale – Cervical

description: Additional file 9. Data translation and cross-cultural adaptation.
DOI: 10.6084/m9.figshare.13161629.v1
title: Additional file 1 of Field apple scab susceptibility of a diverse Malus germplasm collection identifies potential sources of resistance for apple breeding

description: Additional file 1: Table S1. Apple scab resistance response type of 177 Malus accessions in four blocks (replications) across six sampling dates in 2018 and 2019. Resistance response type was evaluated in a research orchard at Geneva, New York by visually assessing scab severity on single leaves throughout the visible tree canopy of single trees/accessions in each replicated block. Plant Introduction (PI) number of each accession is provided according to the USDA Germplasm Resources Information Network (GRIN).
DOI: 10.6084/m9.figshare.13161629
title: Additional file 1 of Field apple scab susceptibility of a diverse Malus germplasm collection identifies potential sources of resistance for apple breeding

description: Additional file 1: Table S1. Apple scab resistance response type of 177 Malus accessions in four blocks (replications) across six sampling dates in 2018 and 2019. Resistance response type was evaluated in a research orchard at Geneva, New York by visually assessing scab severity on single leaves throughout the visible tree canopy of single trees/accessions in each replicated block. Plant Introduction (PI) number of each accession is provided according to the USDA Germplasm Resources Information Network (GRIN).
DOI: 10.6084/m9.figshare.13161645.v1
title: Additional file 2 of Genomics of asthma, allergy and chronic rhinosinusitis: novel concepts and relevance in airway mucosa

description: Additional file 2: Table S2. Integrated data from GWAS catalog on asthma, allergy/AR and CRS -associating SNPs, the corresponding proteins of which have evidence of human airway epithelial expression from manual literature search. The list of 170 asthma/AR –relevant coding gene names were identified based on GWAS search shown in Fig. 1. We detected that 145/170 genes have reported epithelial gene and/or protein expression based on systematic Human Protein Atlas (HPA) search. We detected that 86/170 genes have at least slight evidence of airway epithelial expression based on literature search, the citations are shown in the list. Abbreviations: Protein_Atlas_Lung_Expression(TPM02) = 0 = TPM less than 1; 1 = 1
DOI: 10.6084/m9.figshare.13161657.v1
title: Additional file 4 of Significant transcriptomic changes are associated with differentiation of bone marrow-derived mesenchymal stem cells into neural progenitor-like cells in the presence of bFGF and EGF

description: Additional file 4. Detail of dataset validation using quantitative real-time PCR. The expression of selected genes of interest was validated using quantitative real-time PCR.
DOI: 10.6084/m9.figshare.13161654
title: Additional file 3 of Significant transcriptomic changes are associated with differentiation of bone marrow-derived mesenchymal stem cells into neural progenitor-like cells in the presence of bFGF and EGF

description: Additional file 3. Detail of all differentially regulated genes and enriched gene ontology ontologies during the differentiation. Significantly enriched GO terms generated from ClueGO plugin for both up and downregulated genes in NPCs. Details of transcription factor enrichment analysis using ChEA3.
DOI: 10.6084/m9.figshare.13161657
title: Additional file 4 of Significant transcriptomic changes are associated with differentiation of bone marrow-derived mesenchymal stem cells into neural progenitor-like cells in the presence of bFGF and EGF

description: Additional file 4. Detail of dataset validation using quantitative real-time PCR. The expression of selected genes of interest was validated using quantitative real-time PCR.
DOI: 10.6084/m9.figshare.13161660
title: Additional file 5 of Significant transcriptomic changes are associated with differentiation of bone marrow-derived mesenchymal stem cells into neural progenitor-like cells in the presence of bFGF and EGF

description: Additional file 5. Full list of differential regulated transcription factors in MSCs-derived NPC.
DOI: 10.6084/m9.figshare.13161642.v1
title: Additional file 1 of Genomics of asthma, allergy and chronic rhinosinusitis: novel concepts and relevance in airway mucosa

description: Additional file 1: Table S1. The full Excel file (as a supple file) of the results of ours including also the SNPs with no relevant signs of airway epithelial expression, and the PMIDs. There are several rows and they are based on 1) associated transcript for particular gene 2) allele changes 3) Multiple GWAS-studies that have shown the same loci. These explain the over 60 000 rows of the dataset. Abbreviations: N/A = not available, Protein_Atlas_Lung_Expression(TPM02) = 0 = TPM less than 1; 1 = 1
DOI: 10.6084/m9.figshare.13161642
title: Additional file 1 of Genomics of asthma, allergy and chronic rhinosinusitis: novel concepts and relevance in airway mucosa

description: Additional file 1: Table S1. The full Excel file (as a supple file) of the results of ours including also the SNPs with no relevant signs of airway epithelial expression, and the PMIDs. There are several rows and they are based on 1) associated transcript for particular gene 2) allele changes 3) Multiple GWAS-studies that have shown the same loci. These explain the over 60 000 rows of the dataset. Abbreviations: N/A = not available, Protein_Atlas_Lung_Expression(TPM02) = 0 = TPM less than 1; 1 = 1
DOI: 10.6084/m9.figshare.13161645
title: Additional file 2 of Genomics of asthma, allergy and chronic rhinosinusitis: novel concepts and relevance in airway mucosa

description: Additional file 2: Table S2. Integrated data from GWAS catalog on asthma, allergy/AR and CRS -associating SNPs, the corresponding proteins of which have evidence of human airway epithelial expression from manual literature search. The list of 170 asthma/AR –relevant coding gene names were identified based on GWAS search shown in Fig. 1. We detected that 145/170 genes have reported epithelial gene and/or protein expression based on systematic Human Protein Atlas (HPA) search. We detected that 86/170 genes have at least slight evidence of airway epithelial expression based on literature search, the citations are shown in the list. Abbreviations: Protein_Atlas_Lung_Expression(TPM02) = 0 = TPM less than 1; 1 = 1
DOI: 10.6084/m9.figshare.13161018
title: Additional file 8 of Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts

description: Additional file 8. DEG Concordance between methods.
DOI: 10.6084/m9.figshare.13161437
title: Additional file 2 of Experimental determination of evolutionary barriers to horizontal gene transfer

description: Additional file 2. The selection coefficients data calculated from flow cytometry outputs for all 32 replicates of 44 orthologous genes of S. Typhimurium and E. coli.
DOI: 10.5281/zenodo.4155366
title: Supplementary Information: Learning Protein-Ligand Binding Affinity with Atomic Environment Vectors

description: Supplementary Information: Learning Protein-Ligand Binding Affinity with Atomic Environment Vectors
DOI: 10.5281/zenodo.4111092
title: Anti Cancer Peptide and non-Anti Cancer Peptide data set.

description: Anticancer and non-anticancer peptide data set.
DOI: 10.5281/zenodo.4111091
title: Anti Cancer Peptide and non-Anti Cancer Peptide data set.

description: Anticancer and non-anticancer peptide data set.
DOI: 10.6084/m9.figshare.13161660.v1
title: Additional file 5 of Significant transcriptomic changes are associated with differentiation of bone marrow-derived mesenchymal stem cells into neural progenitor-like cells in the presence of bFGF and EGF

description: Additional file 5. Full list of differential regulated transcription factors in MSCs-derived NPC.
DOI: 10.6084/m9.figshare.13161654.v1
title: Additional file 3 of Significant transcriptomic changes are associated with differentiation of bone marrow-derived mesenchymal stem cells into neural progenitor-like cells in the presence of bFGF and EGF

description: Additional file 3. Detail of all differentially regulated genes and enriched gene ontology ontologies during the differentiation. Significantly enriched GO terms generated from ClueGO plugin for both up and downregulated genes in NPCs. Details of transcription factor enrichment analysis using ChEA3.
DOI: 10.6084/m9.figshare.13161782
title: Phase1-Step5_Dataset of responses.xlsx

description: This data is about the pretesting of UES-ptBR questionnaire, including the sample characterization and responses of questionnaire
DOI: 10.6084/m9.figshare.12929111
title: Supplemental data.docx

description: Transcripts associated with amino acid transportation, apoptosis, substrate metabolism, inflammation, insulin signalling, protein synthesis and breakdown, as well as several transcription factors analysed for significance following eccentric exercise.
DOI: 10.6084/m9.figshare.12929111.v1
title: Supplemental data.docx

description: Transcripts associated with amino acid transportation, apoptosis, substrate metabolism, inflammation, insulin signalling, protein synthesis and breakdown, as well as several transcription factors analysed for significance following eccentric exercise.
DOI: 10.21227/bfv1-zc21
title: 3D-FLARE DB: Two subjects

description: "The friction ridge pattern is a 3D structure which, in its natural state, is not deformed by contact with a surface''. Building upon this rather trivial observation, the present work constitutes a first solid step towards a paradigm shift in fingerprint recognition from its very foundations. We explore and evaluate the feasibility to move from current technology operating on 2D images of elastically deformed impressions of the ridge pattern, to a new generation of systems based on full-3D models of the natural nondeformed ridge pattern itself. There are already a small number of previous studies that have already started scratching the surface of 3D fingerprint recognition and that should not go overlooked. However, the vast majority of these few successful approaches published so far, are based on the reconstruction of fingerprints from multiple 2D images acquired with different lighting conditions (photometric stereo 3D reconstruction) or acquired from different angles (stereo vision 3D reconstruction). Such reconstruction methods lead in general to 2D fingerprints wrapped over the overall volume of the finger. These volumetric fingerprints have shown some promising performance, but still miss the real depth information of the ridge pattern, which, in the best case scenario, is coarsely estimated during the error-prone reconstruction process. In the present work we take one step further, directly acquiring for the first time in a consistent and repeatable manner, full-3D fingerprint models stored as point-clouds, where each point is defined by its [x; y; z] coordinates. This way, the 3D data is directly measured by the sensor, with no post-processing reconstruction stage required. The complete recognition system developed represents as well an alternative to traditional technology based on minutiae detection. It shows that image-based processing algorithms and descriptors can be successfully applied to the new full-3D data, reaching very competitive results and confirming the high distinctiveness of the model.
DOI: 10.21227/bcsn-k243
title: MDD Dataset

description: That's a dataset.
DOI: 10.21227/avj7-8h49
title: MDD Dataset

description: That's a dataset.
DOI: 10.6084/m9.figshare.13161968
title: Cópia de User Engagement Scale (UES - PTBR) - Experiência engajadora (respostas).xlsx

description: Responses of the EE survey, including sample characterization and responses scores.
DOI: 10.6084/m9.figshare.13161968.v1
title: Cópia de User Engagement Scale (UES - PTBR) - Experiência engajadora (respostas).xlsx

description: Responses of the EE survey, including sample characterization and responses scores.
DOI: 10.21227/pbxa-f672
title: MDD Dataset

description: That's a dataset.
DOI: 10.21227/eddn-5939
title: MDD Dataset

description: That's a dataset.
DOI: 10.6084/m9.figshare.12130980.v48
title: MOOD Maps of Google community mobility change during the COVID-19 outbreak

description: The MOOD project (MOnitoring Outbreak events for Disease surveillance in a data science context. H2020) has geo-referenced the data Google has published as a series of PDF files presenting reports on national and subnational human mobility levels relative to a baseline data of late January 2020. The details and the PDF files can be found at https://www.google.com/covid19/mobility/.<br>More detail on these files can be found at https://www.moodspatialdata.com/humanmobilityforcovid19 <br>The first set of data were released on April 2 2020 and have been revised weekly since then. The maps now utilise the CSV data released by Google. Please note that the maps figures use a mean of the previous three days, while the Google PDFs use a single days data so there will be differences between values in our maps when compare to the Google PDFs.<br>The authors have extracted the majority of these data into a series of excel spreadsheets. Each worksheet provides the data for % change in numbers of records at various types of location categories illustrated by: retail and recreation, grocery and pharmacy, parks and beaches, transit stations, workplaces and residential (columns f to K). A second set of columns calculates the difference of each value from the mean values for each category (columns L to P) Columns A to E contain geographical details. Column Q contains the names used to link to a mapping file.There are separate worksheets for the date of the data from each dated release (e.g. 2903, 0504 etc.) and separate worksheets calculating the changes between specific dates.<br>A second spreadsheet has been added calculating the 3 day moving mean of each day from the 15th of February. Each day is referenced by the Gregorian calendar day count. So day 48 = Feb 17th.<br>The maps (for EU & Global) display these data. We provide 600 dpi jpegs of the Global (“WD”) and European (“EU”) mapped values at the latest date available, for each of the mobility categories: retail and recreation (“retrec”) , grocery and pharmacy (“grocphar”) , parks (“parks”) , transit stations (“transit”), residential (“resid”) and workplaces (“work”). We also provide maps of the changes from the previous week (“ch”).<br>All data extracting and subsequent processing have been carried out by ERGO (Environmental Research Group Oxford) on behalf of the MOOD H2020 project. Data will be periodically updated. Additional maps can be obtained on request to the authors.
DOI: 10.5281/zenodo.3989788
title: SemEval-2020 Task 3: Graded Word Similarity in Context

description: For this tasks we ask participants to build systems that try to predict the effect that context has in human perception of similarity of words. We have seen very interesting work that uses local context to predict <strong>discrete</strong> changes in meaning: the different senses of a polysemous word. However context also has more subtle, <strong>continuous</strong> (<strong>graded</strong>) effects on meaning, even for words not necessarily considered polysemous. In order to be able to look at these effects we are building several datasets where we ask annotators to score how similar a pair of words are after they have read a short paragraph (which contains the two words). Each pair is scored within two of these paragraphs, allowing us to look at changes in similarity ratings due to context. CodaLab was used to run this task, you can see the dedicated website and the results of the participants at: https://competitions.codalab.org/competitions/20905
DOI: 10.25919/5f9af4306150e
title: Parkes observations for project P1005 semester 2020APRS_01

description: We propose to conduct observations of PSR J1812-15, a of 1-s pulsar which exhibits both nulling behaviour and clear evidence of acceleration, suggesting that it is in a binary system. Binary pulsars are valuable objects of scientific study, allowing for a wide range of applications, including tests of gravity, probes of the neutron star equation of state and fossil records of stellar evolution. Long spin-period pulsars in binary systems are generally much rarer than faster-spinning recycled pulsars, and represent an under-explored region of pulsar binary evolution. Due to the nulling behaviour of PSRs J1812-15, determination of an orbital or phase-connected solution has so far proved impossible, but both of these steps are vital in allowing for the pulsar’s continued study. We propose a targeted, high-cadence observing campaign designed to map the orbits of this pulsar while simultaneously factoring in the redundancy required in order to overcome its nulling behaviour. By studying this pulsar, we hope to provide new insight into an unusual class of pulsar binary, as well to constrain the nulling properties of the pulsar.
DOI: 10.6084/m9.figshare.13161980
title: Phase2-Step1- EE survey responses

description: Responses of EE survey (UES-ptBR)
DOI: 10.34740/kaggle/dsv/1602931
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.26030/npp5-bt42
title: Arg1 functions in the physiological adaptation of undifferentiated plant cells to spaceflight

description: In this study transcriptome profiling was used to gain insight into the spaceflight adaptation role of Altered response to gravity-1 (Arg1), a gene known to affect gravity responses in plants on Earth. The study compared expression profiles of cultured lines of Arabidopsis thaliana derived from wild type (WT) cultivar Col-0 to profiles from a knock-out line deficient in the gene encoding (ARG1 KO), both on the ground and in space. The cell lines were launched on SpaceX CRS-2 as part of the Cellular Expression Logic (CEL) experiment of the BRIC17 spaceflight mission. The cultured cell lines were grown within 60mm Petri plates in Petri Dish Fixation Units (PDFUs) that were housed within the Biological Research In Canisters (BRIC) hardware. Spaceflight samples were fixed on orbit. Differentially expressed genes were identified between the two environments (spaceflight and comparable ground controls) and the two genotypes (WT and ARG1 KO). Each genotype engaged unique genes during physiological adaptation to the spaceflight environment, with little overlap. Most of the genes altered in expression in spaceflight in WT cells were found to be Arg1-dependent, suggesting a major role for that gene in the physiological adaptation of undifferentiated cells to spaceflight.
DOI: 10.25934/00005735.0
title: Available IPD datapackage for study 'Phase II, Multicenter, Randomized, Parallel-Group, Partially Blinded, Placebo and Avonex Controlled Dose Finding Study to Evaluate the Efficacy As Measured by Brain MRI Lesions, and Safety of 2 Dose Regimens of Ocrelizumab in Patients With RRMS'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.