cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/599bvzxgdc.1
title: Climatic change regulates on riverine input to the oceans: implications for the paleo-ocean Mo isotopic composition

description: This file includes supplementary data on Mo concentrations, δ98Mo values, major ions, and main hydrological parameters at three observation stations (Boluo, Qingyuan, and Gaoyao stations) from the three tributaries of the Pearl River. They also include calculations of the contribution from different sources to the dissolved Mo budget, as well as δ98Mo values, Mo, Cu, and Zn concentrations in anthropogenic sources from the Zhujiang River basin. Additionally, the tables contain previously published time series data of the river dissolved δ98Mo for major global rivers and the parameters, including the Mo flux of the sediment output, Mo flux of the riverine input, and fractionation magnitude for the modern ocean.
DOI: 10.17632/st7p328ktd.1
title: Certified Nursing Assistant Professional Fulfillment and Need for Continuing Education

description: The certified Nursing Assistant survey includes the Professional Fulfillment Index, burnout, job satisfaction, and the need for continuing education.
DOI: 10.17632/cxkv26n853.1
title: Melanocytic Pathology Assessment Tool and Hierarchy for Diagnosis (MPATH-Dx) Tutorial

description: The Melanocytic Pathology Assessment Tool and Hierarchy for Diagnosis (MPATH-Dx) Tutorial is a 30-minute online education tool to showcase the MPATH-Dx schema and its associated classifications (Class I -benign through Class V -invasive melanoma), including instructions on how to map diagnostic interpretations into these classes, followed by case examples and exercises to ensure understanding.

Capsule Summary: 

• The value of a tool to provide standardized classification of the currently diverse pathology terminology for melanocytic skin lesions, in order to facilitate management, is recognized by dermatopathologists. 
• With a simple tutorial, dermatopathologists can confidently and correctly apply the MPATH-Dx schema to improve communication and patient care.

Refer to Reisch, et al. "Implementing the Melanocytic Pathology Assessment Tool and Hierarchy for Diagnosis (MPATH-Dx): Long Term Effect of a Simple Educational Intervention," JAAD International (2023):

Background: A standardized pathology management tool for melanocytic skin lesions may improve patient care by simplifying interpretation and categorization of the diverse terminology currently extant. 

Objective: An online educational intervention teaching dermatopathologists to use the MPATH-Dx schema collapsing multiple diagnostic terms into 5 classes ranging from benign to invasive melanoma. 

Methods: Practicing U.S. dermatopathologists in a 2-year educational intervention study involving a brief tutorial followed by practice on melanocytic lesions, with the goal of teaching pathologists how to correctly use the MPATH-Dx schema; competence using the MPATH-Dx tool 12-24 months post-intervention was assessed. 

Results: At pre-intervention, confidence using the MPATH-Dx tool was high despite lacking prior familiarity, and confidence increased post-intervention. During the intervention, participants used the MPATH-Dx tool correctly for 90% of their interpretations; at post-intervention, participants used the MPATH-Dx tool correctly for 88% of their interpretations. 

Limitations: Future research should examine implementing a standardized pathology assessment schema in actual clinical practice.

Conclusions: Dermatopathologists can be taught to confidently and competently use the MPATH-Dx schema with a simple educational tutorial followed by practice.

Key words: 
Dermatopathology; melanocytic skin lesions; continuing medical education; intervention study; standardized histology schema

Funding sources: Supported by the National Cancer Institute (R01 CA201376 and R01 CA151306). The funding agency had no role in the study design; in the collection, analysis, and interpretation of data; in the writing of the report; or in the decision to submit the article for publication. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.

Conflict of Interest: None disclosed.
DOI: 10.17632/sfmsjhp4gy.1
title: Sex-specific seasonal variation in home range size in a sedentary avian predator

description: Descriptive information and home range sizes of GPS-tracked Goshawks from Estonia
DOI: 10.17632/ww7v9srdvp.1
title: LINF_210013100

description: Mic10 domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/jb5j2rczjz.1
title: Attention Allocation to Projection Level Alleviates Overconfidence in Situation Awareness

description: This dataset contains several files related to our research paper titled "Attention Allocation to Projection Level Alleviates Overconfidence in Situation Awareness". These files are intended to provide a comprehensive overview of the data analysis process and the presentation of results. Below is a list of the files included and a brief description of each:

R Scripts: These are scripts written in the R programming language for data processing and analysis. The scripts detail the steps for data cleaning, transformation, statistical analysis, and the visualization of results. To replicate the study findings or to conduct further analyses on the dataset, users should run these scripts.

R Markdown File: Offers a dynamic document that combines R code with rich text elements such as paragraphs, headings, and lists. This file is designed to explain the logic and steps of the analysis in detail, embedding R code chunks and the outcomes of code execution. It serves as a comprehensive guide to understanding the analytical process behind the study.

HTML File: Generated from the R Markdown file, this file provides an interactive report of the results that can be viewed in any standard web browser. For those interested in browsing the study's findings without delving into the specifics of the analysis, this HTML file is the most convenient option. It presents the final analysis outcomes in an intuitive and easily understandable manner. For optimal viewing, we recommend opening the HTML file with the latest version of Google Chrome or any other modern web browser. This approach ensures that all interactive functionalities are fully operational.

Together, these files form a complete framework for the research analysis, aimed at enhancing the transparency and reproducibility of the study.
DOI: 10.17632/db2m9rxznm.2
title: The genus Montastraea (Cnidaria, Scleractinia) from the Cretaceous in the Araripe Basin, Northeastern Brazil

description: The Araripe Basin, located in the Northeast Region of Brazil and spanning portions of Ceará, Pernambuco, and Piauí states, is one of the most emblematic sedimentary basins in the country due to its abundance of fossils and the richness of its paleobiota. Concretions can be found in the western region, including Araripina and Trindade in Pernambuco and Caldeirão Grande and Simões in Piauí. During expeditions in Simões, Piauí, we identified the first fossil coral from the Romualdo Formation (Lower Cretaceous, Santana Group), classified within the genus Montastraea Blainville, 1830. This significant discovery advances our understanding of the region's paleoenvironmental history and biodiversity. Although Montastraea is relatively common in the Tethys Sea, this represents its southernmost occurrence to date. This study provides descriptive, morphometric, and phylogenetic data for the specimen, reinforcing the Tethyan affinities of the Araripe biota. The presence of this fossil coral suggests that a shallow, tropical marine environment adapted to clear, likely warm, waters.
Keywords: Fossil, Coral, Romualdo Formation, Paleobiogeography
DOI: 10.17632/8zrzzsxkcm.1
title: Obtaining buildings' base case and electrified hourly energy consumption using building energy analysis with EnergyPlus and OpenStudio

description: Data sets used in Khosravani et al., 2024 - Challenges of Full Electrification Integrated with 100% Renewable Energy in the Residential and Commercial Sectors.
Using building energy analysis, we obtained the base case hourly electricity and natural gas loads and the hourly electrified load. We used the Department of Energy's reference building models as they are for the base case scenario. We replaced the conventional HVAC system with an air-source heat pump for the electrified scenario.
Please note that JSON files for DOE reference building models have been reproduced and published for the public use.
DOI: 10.6084/m9.figshare.28229519
title: Sequence chromatogram of the c.1032+5G&gt;A mutation on the <i>COL4A5</i> gene in the proband and his family members。

description: In family 3, the detected variant in the <i>COL4A5</i> gene (c.1032+5G&gt;A) of the proband inherited from her mother.
DOI: 10.6084/m9.figshare.28229519.v1
title: Sequence chromatogram of the c.1032+5G&gt;A mutation on the <i>COL4A5</i> gene in the proband and his family members。

description: In family 3, the detected variant in the <i>COL4A5</i> gene (c.1032+5G&gt;A) of the proband inherited from her mother.
DOI: 10.17632/vgzbgcxkvh.2
title: Data for Kwarteng et al Influence of Puberty on Relationships Between Body Composition and Blood Pressure: A Cross-Sectional Study. Accepted for publication in Pediatric Research

description: These are the underlying data for Kwarteng EA, Shank LM, Faulkner LM, Loch LK, Fatima S, Gupta S, Haynes HE, Ballenger KL, Parker MN, Brady SM, Zenno A, Tanofsky-Kraff M. Yanovski JA. Influence of Puberty on Relationships Between Body Composition and Blood Pressure: A Cross-Sectional Study. In Press, Pediatric Research, 2023
DOI: 10.17632/b9nmhj7ts5.1
title: LINF_340018800

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/8jsd4ds57k.3
title: Supplementary data for the article: Study of Arsenophonus symbionts in Hippoboscidae

description: Alignments:
1. Arsenophonus matrix - concatenated matrix of 57 ortholog sequences (AA) extracted from all available Arsenophonus proteomes (analyzed by PhyML, PhyloBayes and IQ-TREE2) in a fasta format
2. Host mitochondrial matrix - concatenated matrix of 12 mitochondrial genes (NA) extracted from 12 mitochondrial genomes of hippoboscids (analyzed by IQ-TREE2) in a fasta format
3. Host COI matrix - phylogenetic matrix of COI mitochondrial gene (NA) of 63 taxa of hippoboscids (analyzed by IQ-TREE2) in a fasta format
4. Host nuclear matrix - concatenated matrix of 4 genes (NA) extracted from 10 nuclear genomes of hippoboscids (analyzed by IQ-TREE2) in a fasta format

Phylogenetic trees folder:
Phylogenetic trees generated by PhyML, PhyloBayes and IQ-TREE2 in a newick format.

Annotations folder:
Annotations of the complete genomes and genome drafts for the the newly described Arsenophonus symbionts of hippoboscids in gbk format.

Detailed description of used methods can be found in the Materials and Methods section.
DOI: 10.17632/mc665p2xgc.1
title: LINF_340013600

description: Serine/threonine-protein phosphatase | PP1-3c; Leishmania infantum (strain JPCM5)
DOI: 10.17632/369cykf7y5.1
title: Data of "Mantle oxidization induced by recycled carbonate: Insights from Mg-Zn-Fe-Cu isotopic systematics of intraplate basalts"

description: Major and trace elements and Sr-Nd-Mg-Zn-Fe-Cu isotopes data of Cenozoic intraplate alkali basalts in Northeast China and Central Myanmar.
DOI: 10.17632/pspv9z9g4t.1
title: Data for: Formation of early continental crust by remelting of altered oceanic crust: smoking-gun evidence from K and O isotopes

description: Raw data for the manuscript by Zhang et al. to be published by Geochimica et Cosmochimica Acta as "Formation of early continental crust by remelting of altered oceanic crust: smoking-gun evidence from K and O isotopes".
DOI: 10.17632/xjbcg5yvvb.1
title: LINF_060012000

description: protein kinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/zhy4wgfbyn.1
title: Warming and pollution interact to alter energy transfer efficiency, performance and fitness across generations in zebrafish (Danio rerio)

description: All data associated with ms "Warming and pollution interact to alter energy transfer efficiency, performance and fitness across generations in zebrafish (Danio rerio)"
DOI: 10.17632/cbntssv2j8.1
title: Severe prolonged drought favours stress-tolerant microbes in dryland soils

description: The study was conducted over three years in arid and semi-arid regions of Australia to assess the belowground effects of altered rainfall regimes. we found that The microbial communities showed significant variations between the semi-arid and arid sites and over the years. 
The findings provide a better understanding of microbial responses to predicted increases in rainfall variability and the impact on the functioning of semi-arid and arid ecosystems. The provided metadata contains site details and their environmental and nutrient values which are used for the study.
DOI: 10.5281/zenodo.14679814
title: pRESTO test data

description: Test data for pRESTO software.
DOI: 10.5281/zenodo.14679815
title: pRESTO test data

description: Test data for pRESTO software.
DOI: 10.17632/cbntssv2j8.2
title: Severe prolonged drought favours stress-tolerant microbes in dryland soils

description: The study was conducted over three years in arid and semi-arid regions of Australia to assess the belowground effects of altered rainfall regimes. we found that The microbial communities showed significant variations between the semi-arid and arid sites and over the years. The findings provide a better understanding of microbial responses to predicted increases in rainfall variability and the impact on the functioning of semi-arid and arid ecosystems. 

The provided excel file is supplementary material 2 of this paper, contain details on DESeq2 result, vegetation data and the environmental and nutrient values which are used for the study.
DOI: 10.17632/cfpd53cf3k.1
title: LINF_060014000

description: lipin
Leishmania infantum (strain JPCM5)
DOI: 10.17632/9fvb4gzjhv.1
title: LDHU3_08.1760

description: beta tubulin; Leishmania donovani (HU3 strain)
DOI: 10.15468/dl.uhbf2s
title: Occurrence Download

description: A dataset containing 31171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations, Pl@ntNet observations)",
 "OccurrenceStatus is Present",
 "TaxonKey is Platanus occidentalis L."
 ]
}

 The dataset includes 31171 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000114-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/rmyrrfynjy.1
title: LDHU3_02.0050

description: Aminopeptidase P1; Leishmania donovani (HU3 strain)
DOI: 10.17632/hc2p6fbfb4.1
title: LDHU3_08.1730

description: Amidinotransferase; Leishmania donovani (HU3 strain)
DOI: 10.34740/kaggle/dsv/10498528
title: Blood Cell Morphology Dataset for Leukemia
DOI: 10.5281/zenodo.14679822
title: Genetic variation in zoophagy and diet specialization in the phytozoophagous tarnished plant bug, Lygus lineolaris.
DOI: 10.5281/zenodo.14679823
title: Genetic variation in zoophagy and diet specialization in the phytozoophagous tarnished plant bug, Lygus lineolaris.
DOI: 10.15468/dl.mxj7np
title: Occurrence Download

description: A dataset containing 433070 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hieraaetus pennatus (Gmelin, 1788))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 433070 records from 636 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000109-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/cyf5j2
title: A15_28682.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/f261527e-041a-407e-8bca-d1079e237054'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/f261527e-041a-407e-8bca-d1079e237054
DOI: 10.6084/m9.figshare.27284065
title: Parental magma and mantle source compositions of chromitites in the Mesoarchean Nuggihalli greenstone belt, India: evidence for Archaean subduction zone magmatism

description: Supplementary Tables.
DOI: 10.6084/m9.figshare.27284065.v1
title: Parental magma and mantle source compositions of chromitites in the Mesoarchean Nuggihalli greenstone belt, India: evidence for Archaean subduction zone magmatism

description: Supplementary Tables.
DOI: 10.7910/dvn/ctiicw
title: A15_28683.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/3479bf1e-bef0-4bed-b5bb-fdd1798fd508'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/3479bf1e-bef0-4bed-b5bb-fdd1798fd508
DOI: 10.7910/dvn/iygko6
title: A15_28684.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/bf059449-894c-447f-9a40-c7b100dd0039'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/bf059449-894c-447f-9a40-c7b100dd0039
DOI: 10.7910/dvn/xrtktr
title: A15_28686.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/1ecb5904-44a1-4eeb-a609-d438e3c73bf2'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/1ecb5904-44a1-4eeb-a609-d438e3c73bf2
DOI: 10.7910/dvn/nbzyir
title: A15_28687.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/ff72695b-b611-4a79-89e1-fc577241d485'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/ff72695b-b611-4a79-89e1-fc577241d485
DOI: 10.7910/dvn/ufieeg
title: A15_28688.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/121d24eb-386a-4aeb-ae62-d4a36056d3f4'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/121d24eb-386a-4aeb-ae62-d4a36056d3f4
DOI: 10.7910/dvn/lfzdly
title: A15_28689.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/6847995e-d32f-43ad-a99b-4484bf5ccc79'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/6847995e-d32f-43ad-a99b-4484bf5ccc79
DOI: 10.5284/1123007
title: Site Data from an Archaeological Evaluation at Freelands, Thorpe Road, Weeley, Essex, July 2023

description: This collection comprises image, report, site record and CAD data from an archaeological evaluation (two trial-trenches) was carried out on land east of Freelands, Thorpe Road, Weeley, Essex in advance of a new residential development. The work was undertaken by Colchester Archaeological Trust in July 2023. This evaluation revealed a post-medieval/ modern ditch, modern ditch and three tree-throws, with a very small scatter of medieval pottery from the site.
DOI: 10.7910/dvn/gbkg7e
title: A15_28690.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/3f06bea7-d697-4dd6-aac3-d1daed418ab3'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/3f06bea7-d697-4dd6-aac3-d1daed418ab3
DOI: 10.7910/dvn/66zdzb
title: A15_28692.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/70218bda-ae9f-4b53-b8d7-7c736d1d8835'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/70218bda-ae9f-4b53-b8d7-7c736d1d8835
DOI: 10.7910/dvn/q5qe0y
title: A15_28693.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/4d0df351-ee10-4d9e-a4b0-f849b4c5aae9'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/4d0df351-ee10-4d9e-a4b0-f849b4c5aae9
DOI: 10.5281/zenodo.13710176
title: Single-cell lipidomics: an automated and accessible microfluidic workflow validated by capillary sampling

description: We report the first demonstration of a microfluidics-based approach to measure lipids in single living cells using widely-available liquid chromatography mass spectrometry (LC-MS) instrumentation. The method enables the rapid sorting of live cells into liquid chambers formed on standard petri dishes, and their subsequent dispensing into vials for analysis using LC-MS. This approach facilitates automated sampling, data acquisition and analysis and carries the additional advantage of chromatographic separation, aimed at reducing matrix effects present in shotgun lipidomics approaches. We demonstrate that our method detects comparable numbers of features at around 200 lipids in populations of single cells versus established live single-cell capillary sampling methods, and with greater throughput, albeit with the loss of spatial resolution. We also show the importance of optimisation steps in addressing challenges from lipid contamination, especially in blanks, and demonstrate a 75% increase in number of lipids identified. This work opens up a novel, accessible and high through-put way to obtain single-cell lipid profiles and also serves as an important validation of single-cell lipidomics through the use of different sampling methods.
description: CSampling = Capillary sampling

Y = Yokogawa tips

H = Humanix tips

after = after optimisation

Microfluidics = Microfluidics sampling

For standards and mobile phase definitions please see paper (materials & methods section)
DOI: 10.5281/zenodo.13710177
title: Single-cell lipidomics: an automated and accessible microfluidic workflow validated by capillary sampling

description: We report the first demonstration of a microfluidics-based approach to measure lipids in single living cells using widely-available liquid chromatography mass spectrometry (LC-MS) instrumentation. The method enables the rapid sorting of live cells into liquid chambers formed on standard petri dishes, and their subsequent dispensing into vials for analysis using LC-MS. This approach facilitates automated sampling, data acquisition and analysis and carries the additional advantage of chromatographic separation, aimed at reducing matrix effects present in shotgun lipidomics approaches. We demonstrate that our method detects comparable numbers of features at around 200 lipids in populations of single cells versus established live single-cell capillary sampling methods, and with greater throughput, albeit with the loss of spatial resolution. We also show the importance of optimisation steps in addressing challenges from lipid contamination, especially in blanks, and demonstrate a 75% increase in number of lipids identified. This work opens up a novel, accessible and high through-put way to obtain single-cell lipid profiles and also serves as an important validation of single-cell lipidomics through the use of different sampling methods.
description: CSampling = Capillary sampling

Y = Yokogawa tips

H = Humanix tips

after = after optimisation

Microfluidics = Microfluidics sampling

For standards and mobile phase definitions please see paper (materials & methods section)
DOI: 10.7910/dvn/75jt0g
title: A15_28694.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/5f75c06f-2999-44e3-9509-e8d7b8ddaf82'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/5f75c06f-2999-44e3-9509-e8d7b8ddaf82
DOI: 10.7910/dvn/b4ztdi
title: A15_28695.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/20dbfe1c-e4a4-4269-89eb-9186aedb7c6a'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/20dbfe1c-e4a4-4269-89eb-9186aedb7c6a
DOI: 10.7910/dvn/edztkc
title: A15_28696.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/ba2a0118-46d8-4f4f-9b08-223d50e5c8ba'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/ba2a0118-46d8-4f4f-9b08-223d50e5c8ba
DOI: 10.7910/dvn/stkvrq
title: A15_28697.jpg

description: Link to OCHRE database: &lt;a href = 'http://pi.lib.uchicago.edu/1001/org/ochre/dc2fd0ed-e77a-4247-bf93-6071959a2820'&gt;http://pi.lib.uchicago.edu/1001/org/ochre/dc2fd0ed-e77a-4247-bf93-6071959a2820