cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.2579337
title: Velocity-based macrorefugia for North American ecoregions

description: Climate-change refugia, or areas of species persistence under climate change, may vary in proximity to a species' current distribution, with major implications for their conservation value. Thus, the concept of climate velocity (Loarie et al. 2009)---the speed at which an organisms must migrate to keep pace with climate change---is useful to compare and evaluate refugia. Using analog climate methods, both forward and backward velocity can be calculated, providing complementary information about spatio-temporal responses to climate change (Hamann et al. 2014, Carroll et al. 2015). In particular, backward velocity calculations can be used to identify areas of high potential refugium value for a given time period and species or ecoregion (Stralberg et al. 2018a). Refugia for a given ecoregion represent areas where the climates of that ecoregion may persist into the future. 

I used random forest model projections of future ecoregions (Stralberg et al. 2018b) to generate an index of climate-change refugia potential for individual ecoregions, using the methods outlined in Stralberg et al. (2018a). The index ranges from 0 to 1, with values close to 1 indicating overlap or very close proximity to the current mapped ecoregion, across multiple climate models. Because the random forest algorithm is a classifier that assigns an ecoregion class to every future pixel, it does not account for novel climates that are not currently found in any North American ecoregion. Of course novelty is relative and can be measured in many different ways. I calculated a multivariate environmental similarity surface (MESS) following Elith et al. (2010) to generate an index of novelty for each future ecoregion (negative values indicate dissimilarity).

For mapping purposes, novel climates for each ecoregion, RCP, and time period were identified as those with values lower than the 1st percentile of dissimiarity values for the baseline periods:

1. RCP 8.5, 2080s

2. RCP 8.5, 2050s

3. RCP 4.5, 2080s

4. RCP 4.5, 2050s

 

References

Carroll, C., J. J. Lawler, D. R. Roberts, and A. Hamann. 2015. Biotic and climatic velocity identify contrasting areas of vulnerability to climate change. PLoS ONE 10:e0140486.

Elith, J., M. Kearney, and S. Phillips. 2010. The art of modelling range-shifting species. Methods in Ecology and Evolution 1:330-342.

Hamann, A., D. Roberts, Q. Barber, C. Carroll, and S. Nielsen. 2015. Velocity of climate change algorithms for guiding conservation and management. Global Change Biology 21:997-1004.

Stralberg, D., C. Carroll, J. H. Pedlar, C. B. Wilsey, D. W. McKenney, and S. E. Nielsen. 2018a. Macrorefugia for North American trees and songbirds: Climatic limiting factors and multi-scale topographic influences. Global Ecology and Biogeography 27:690-703. https://doi.org/10.1111/geb.12731 

Stralberg, Diana. 2018b. Climate-projected distributional shifts for North American ecoregions [Data set]. Zenodo. http://doi.org/10.5281/zenodo.1407176<br>
DOI: 10.5281/zenodo.3686918
title: Provisioning forest and conservation science with European tree species distribution models under climate change

description: Estimating shifts in the current range of forest tree species is crucial for formulating adaptive management strategies such as assisted migration. Ecological niche models have been the most widely used tools to estimate the potential climatic suitability of species worldwide. The reliability of such estimations depends on the model algorithm and the input data such as climate and species occurrence. We developed a dataset of the potential distribution of seven ecologically and economically important tree species of Europe in terms of their climatic suitability with an ensemble approach while accounting for uncertainty due to model algorithms. The distribution models shall be the basis for follow-up studies in forest and conservation science.
DOI: 10.6084/m9.figshare.17711141
title: Excel Data-ICBT for PMS

description: We provide data generated in a randomized controlled trial carried out at residence halls of the Tabriz University of Medical Sciences. The study was conducted to investigate the effect of Internet-based cognitive-behavioral therapy (ICBT) on symptom severity and quality of life of Iranian female university students suffering from premenstrual syndrome (PMS). Moreover, the PMS-related disability and attitude toward menstruation were investigated. Internet-based cognitive-behavioral therapy with 92 female university students was included.
DOI: 10.6084/m9.figshare.19082273
title: Excel Raw Data-ICBT for PMS

description: We provide data generated in a randomized controlled trial carried out at residence halls of the Tabriz University of Medical Sciences. The study was conducted to investigate the effect of Internet-based cognitive-behavioral therapy (ICBT) on symptom severity and quality of life of Iranian female university students suffering from premenstrual syndrome (PMS). Moreover, the PMS-related disability and attitude toward menstruation were investigated. Internet-based cognitive-behavioral therapy with 92 female university students was included.
DOI: 10.6084/m9.figshare.19082390
title: Data analysis Syntax-ICBT for PMS

description: This Syntax file is for the relevant Excel files [DOI: https://doi.org/10.6084/m9.figshare.19082273], [DOI: https://doi.org/10.6084/m9.figshare.17711141].<br>
DOI: 10.6084/m9.figshare.20367282
title: Supplementary Material for: Relationship between proton pump inhibitors and adverse effects in hemodialysis patients: a systematic review and meta-analysis

description: Background：Currently, the interaction between proton pump inhibitors (PPI) and their effects on hemodialysis (HD) patients has not been clarified. Here, we aimed to explore the association between PPI and adverse outcomes in HD patients. Methods：A search was performed on the PubMed, Embase, Cochrane Library, and Web of Science databases for relevant articles published up to April 10, 2022. Studies examining the association (odds ratio [OR]) between PPI and side effects were identified. The study followed guidelines prescribed in the Preferred Reporting Items for Systematic Reviews and Meta-Analysis (PRISMA), and was registered with PROSPERO (CRD42021291177). Results: A total of 12 studies comprising 4,227,497 HD patients with PPI were identified. Results showed that PPI use was associated with increased risk of bone fracture and hip fracture in the HD patients (pooled OR = 1.29, 95% CI = 1.21-1.37, p&lt;0.00001, I2=0%; pooled OR = 1.37, 95% CI = 1.12-1.67, p=0.002, I2=82%). Besides, HD patients who received PPI were more likely to develop hypomagnesemia compared with those who did not receive PPI (pooled OR = 2.79, 95% CI = 1.95-4.00, p&lt;0.00001, I2=0%). In addition, PPI use was linked to abdominal aortic calcification and all-cause mortality (pooled OR=2.03, 95% CI=1.28-3.24, p =0.003, I2=0%), (pooled OR = 1.44, 95% CI = 1.17-1.78, p = 0.0006, I2=0%). Conclusions: Taken together, the present results demonstrate that PPI use in HD patients is independently associated with adverse reactions such as hip fracture, hypomagnesemia, abdominal aortic calcification, and all-cause mortality. Thus, the use of PPI in HD patients should be carefully evaluated and optimized.
DOI: 10.6084/m9.figshare.21317808
title: Supplementary Material for: Safety of Apixaban Monotherapy for Non-Valvular Atrial Fibrillation-Related Acute Stroke with Intra-/Extracranial Artery Stenosis

description: <b><i>Introduction:</i></b> We investigated whether apixaban is safe for the prevention of further adverse events in non-valvular atrial fibrillation (NVAF) patients with intra-/extracranial artery stenosis (Stenosis group) compared with acute large vessel occlusion without intra-/extracranial artery stenosis (No stenosis group). We also examined whether combination therapy using apixaban and antiplatelet is safe. <b><i>Methods:</i></b> ALVO (Apixaban on clinical outcome of patients with Large Vessel Occlusion [LVO] or stenosis) was a historical and prospective multicenter registry at 38 centers in Japan. Patients with NVAF and acute LVO or stenosis who received apixaban within 14 days after onset were included. We conducted the post hoc analysis using the ALVO dataset. We compared patients with stenosis versus those without stenosis in terms of the primary outcome, which was defined as a composite of all-cause death, major bleeding events, and ischemic events 365 days after onset. <b><i>Results:</i></b> Of the 662 patients, 54 (8.2%) patients were classified into the Stenosis group, and 104 patients of the total (16%) reached the primary outcome. The cumulative incidence of primary outcome was not significantly different between the No stenosis and the Stenosis groups (hazard ratio [HR] 1.2, 95% confidence interval [CI]: 0.64–2.4; <i>p</i> = 0.52). Even after adjustment for predictive clinical variates, no significant difference in the primary endpoint between the No stenosis and the Stenosis groups was shown (adjusted HR 1.2, 95% CI: 0.59–2.5; <i>p</i> = 0.60). Fifty patients (7.6%) used an antiplatelet with apixaban. Among the Stenosis group patients, the cumulative incidence of the primary outcome was significantly higher among patients treated with an antiplatelet and apixaban (HR 3.5, 95% CI: 1.0–12; <i>p</i> = 0.048). <b><i>Conclusion:</i></b> Apixaban monotherapy appears safe for the prevention of further adverse events in the Stenosis group patients similar to the No stenosis group patients. Concomitant use of an antiplatelet might not be favorable in patients with stenosis.
DOI: 10.25625/9dnrsj
title: The ePIC PID Information Type Registry

description: Documentation of the ePC Data Type Registries
DOI: 10.5066/p961j30g
title: Geochemistry Data from Samples Collected in 2015-2017 to study an OG wastewater spill in Blacktail Creek, North Dakota

description: These metadata sets present the comprehensive geochemical composition of solid and water samples from the site of a 11.4ML (million liters) wastewater spill discovered in January, 2015. Analyses of a pipeline sample (analyses of select analytes), supplied by the North Dakota Department of Health are also included. The spill was near Blacktail Creek, north of Williston, ND. The leak was from a pipeline located approximately 70m from Blacktail Creek. The creek flows 17km before entering the Little Muddy River, a tributary to the Missouri River. The study included samples collected in waters upstream and downstream from Blacktail Creek in February and June 2015, June 2016, and June 2017. These data sets include field measurements of pH, temperature, dissolved oxygen, sulfide and specific conductance; laboratory analyses of major ions, trace elements, alkalinity, ammonium, strontium and radium isotopes; non-volatile dissolved organic carbon (NVDOC), low molecular weight organic acids (LMWOA), and hydrocarbons at surface-water sites. Geomorphic characteristics and watershed similarity tables are included. Sediments were collected in February and June 2015, June 2016, and June 2017 for analysis of carbon, nitrogen, radium and uranium isotopes and extractable ammonium, strontium, and barium. Duplicate water samples and field blanks were collected during each sampling campaign. Two groundwater seep sites were sampled in June 2017 for a select number of analytes. This data release includes twelve data tables provided in two zip folders both as Excel (*.xlxs) and machine readable 'comma-separated values' format (*.csv): 1) data dictionary; 2) descriptions of sampling site locations; 3) summary of field sampling procedures; 4) field measurements, NVDOC, ammonium, alkalinity, strontium isotopes, deuterium and oxygen-18 isotopes, LMWOA and hydrocarbons; 5) concentrations of major anions, cations and trace elements; 6) radiochemistry for sediment samples; 7) extractable ammonium, barium, and strontium concentrations from sediment samples; 8) measured and computed composition of water extracts and pore water concentrations; 9) carbon and nitrogen from sediments; 10) geomorphic characteristics; 11) watershed similarity analysis; and 12) Quality Assurance/Quality Control (QA/QC). This metadata publication's citation will be added to "Geochemical Indicators of Oil and Gas Wastewater can Trace Potential Exposure Pathways Following Releases to Surface Waters", Cozzarelli, et al., USGS ScienceBase associated manuscript in review, summer of 2020.
DOI: 10.5066/p9mlcvkr
title: Water quality and survival data for 96 hour bioassays conducted near the Blacktail Creek wastewater spill, North Dakota, 2015-17

description: Data set contains water quality measurements and survival of fathead minnow from in situ and laboratory bioassay exposures to wastewater from a spill on Blacktail Creek, North Dakota, USA
DOI: 10.5281/zenodo.7116398
title: Thermodynamics of the metal-insulator transition in the extended Hubbard model from determinantal quantum Monte Carlo

description: This zip archive contains the DQMC data sets for the \beta=1/T resolved double<br> occupancy, internal energy per site, antiferromagnetic structure factor and<br> charge density wave structure factor obtained with the ALF Code.<br> The computations have been carried out on a square lattice at half filling for<br> the Hubbard model, the U-V model and the long-range Coulomb(LRC)-Hubbard model.<br> Every model is computed at fixed U/t=1.9. The naming convention of the csv-files is the following:<br> V0.0 = Hubbard model<br> V0.x = U-V model with V/t=0.x<br> Vcx.x = LRC-Hubbard model with V_C/t=x.x<br> <br> - dat_docc_{\Delta\tau}_V{x}.csv = double occupancy at \Delta\tau={0.05, 0.1, 0.2}<br> - dat_docc_{\Delta\tau}_V{x}_err.csv = corresponding statistical error<br> - dat_energy_0.1_V{x}.csv = internal energy at \Delta\tau=0.1<br> - dat_energy_0.1_V{x}_err.csv = corresponding statistical error<br> - dat_saf_0.1_V{x}.csv = antiferromagnetic structure factor at \Delta\tau=0.1<br> - dat_saf_0.1_V{x}_err.csv = corresponding statistical error<br> - dat_scdw_0.1_V{x}.csv = charge density wave structure factor at \Delta\tau=0.1<br> - dat_scdw_0.1_V{x}_err.csv = corresponding statistical error The structure of each file is to be read column-wise:<br> \beta, L=8, L=10, L=12, L=16, L=18, L=20
DOI: 10.5281/zenodo.3253829
title: Data Appendices for "Textual Scholarship and Contemporary Literary Studies: Jennifer Egan's Editorial Processes and the Archival Edition of Emerald City"

description: This dataset documents the version variants between Jennifer Egan's early short stories, "The Stylist" and "Sacred Heart". It is a supplement to the article "Textual Scholarship and Contemporary Literary Studies: Jennifer Egan’s Editorial Processes and the Archival Edition of <em>Emerald City</em>" in <em>LIT: Literature Interpretation Theory</em>.
DOI: 10.5281/zenodo.5147035
title: X-ray CT and MAPS data of Hot-dry rock

description: These multiple scanning experiment image can be used to construct multi-scale multi component digital rock.
DOI: 10.5284/1047571
title: Finzel's Reach, Bristol

description: The Finzel's Reach project was the largest combined archaeological, geoarchaeological and historic building investigation to have been completed within the historic core of the City of Bristol, and took place on the former Courage Brewery site on Counterslip. The archaeological excavations and targeted geoarchaeological sampling of the surviving buried remains were carried out by Oxford Archaeology; the recording of the extant historic buildings, prior to their selective demolition and renovation, was initially undertaken by Pre-Construct Archaeology in 2004 and completed by CgMs Consulting and James Dixon between April 2007 and April 2008. These works were conducted during the initial stages of the rejuvenation of the site by HDG Mansur to create 'Finzel's Reach', a major redevelopment that was designed to provide a combination of retail, residential and office space housed within a mixture of predominantly new buildings alongside a number of restored former brewery buildings, and constructed on a street pattern that reflected the former medieval crossroads that centred around the site of the Temple Cross.The archaeological fieldwork, historic building recording, post-excavation analysis and publication were undertaken in accordance with requirements set out by Bristol City Council.
DOI: 10.6084/m9.figshare.21162538
title: Figure data for "High Parametric Efficiency in Laser Cavity-Soliton Microcombs"

description: Figure data for: <strong>High Parametric Efficiency in Laser Cavity-Soliton Microcombs</strong> Antonio Cutrona<sup>1,2</sup>, Maxwell Rowley<sup>2</sup>, Debayan Das<sup>1,2</sup> , Luana Olivieri <sup>1,2</sup>, Luke Peters <sup>1,2</sup>, Sai T. Chu<sup>3</sup>, Brent E. Little<sup>4</sup>, Roberto Morandotti<sup>5</sup>, David J. Moss<sup>6</sup>, Juan Sebastian Totero Gongora<sup>1,2</sup>, Marco Peccianti<sup>1,2</sup>, and Alessia Pasquazi<sup>1,2,*</sup> <sup>1</sup> Emergent Photonics Research Centre, Dept. of Physics, Loughborough University, Loughborough, LE11 3TU, England, UK <sup>2</sup>Emergent Photonics Lab (Epic), Department of Physics and Astronomy, University of Sussex, Brighton, BN1 9QH, UK <sup>3</sup> Department of Physics, City University of Hong Kong, Tat Chee Avenue, Hong Kong, China SAR <sup>4</sup> State Key Laboratory of Transient Optics and Photonics, Xi’an Institute of Optics and Precision Mechanics, CAS, Xi’an, China <sup>5</sup> INRS-EMT, 1650 Boulevard Lionel-Boulet, Varennes, J3X 1S2, Québec, Canada <sup>6</sup> Optical Sciences Centre, Swinburne University of Technology, Hawthorn, VIC 3122, Victoria, Australia *a.pasquazi@lboro.ac.uk <strong>Acknowledgements </strong> EPSRC UKRI (EP/S001018/1). ERC (851758 TELSCOMBE). DSTL (DSTLX1000142078). INNOVATE UK (IUK project 77087 and 10004412). Leverhulme Trust (ECF-2020-537). ERC (TIMING 725046). NSERC (Alliance and Discovery Grants Schemes), Canada Research Chair and MESI PSR-SIIRI Initiatives in Quebec. Strategic Priority Research Program of the Chinese Academy of Sciences (grant number XDB24030300). <br>
DOI: 10.7483/opendata.cms.udbf.jkr9
title: CMS data preservation, re-use and open access policy

description: This document describes the CMS collaboration's policy on long-term data preservation, re-use and open access. The policy has been approved by the CMS Collaboration Board in March 2012.
DOI: 10.1285/i24212113v6i2-2p125
title: Impacts of climate change on rural poverty in the Brazilian Northeast and South

description: The objective is to analyze how climate change impacts affect rural poverty dimensions of residents of communities in the backlands of the Northeast and South of Brazil. This study has a qualitative design. Seven focus groups were conducted with 79 participants from impoverished rural communities in the Northeast and South of Brazil. The content of the material collected was analyzed. The research participants simultaneously experience various levels of deprivation in the form of multiple shortcomings, such as food deprivation, improper housing and the lack of leisure areas. Also, a series of deficiencies linked to climate change is identified, such as the loss of production and the feeling of insecurity for the future.
DOI: 10.1285/i24212113v6i2-2p48
title: "Another Haiti starting from the youth": Integrating the arts and sciences for empowering youth climate justice action in Jacmel, Haiti

description: Despite being on the front lines of climate catastrophe, the voices and actions of critically affected groups are often overlooked. The present research partnered with Haitian youth—who are marginalized from climate decision-making on the basis of nationality and age—to explore and address sustainability challenges in their coastal community. Specifically, this study explored processes of individual and collective empowerment made possible through a community-based arts center course that integrated the arts and sciences to position youth as change agents for a more sustainable Haiti. Through interviews conducted with arts center staff and students, we found that the arts were critical in facilitating collective empowerment, particularly towards resisting and rewriting dominant cultural narratives that marginalize Haiti on the world stage and marginalize youth as critical actors for sustainability in their communities. Moreover, we found that integrating the arts and sciences had the potential to empower individual youth by supporting their critical awareness of environmental problems, their capacity to communicate with adults—including decision-makers—and by encouraging their active participation in transforming their communities. Findings of the present study have implications for youth-centered educational programs, collaborative research, and community organizing for intergenerational and climate justice.
DOI: 10.17632/2d95dztpxn.4
title: Data for "A decomposition of the atmospheric and surface contributions to the outgoing longwave radiation"

description: 1. olr_fir_mir_toa_atm_sfc_2013_annualmean_all_clr.nc
2. olr_fir_mir_atm_trop_stra_2013_annualmean_all_clr.nc
3. raddp_fluxdp_4d_2013_annualmean_all_clr.nc
4. tau_tr_dtrdp_dtrdz_ptau1_2013_annualmean_total_fir_mir_all_clr.nc
5. tau_tr_dtrdp_dtrdz_ptau1_2013_annualmean_globalmean_band_all_clr.nc
6. tau_tr_dtrdp_dtrdz_ptau1_2013_annualmean_globalmean_total_fir_mir_all_clr.nc
7. tr_dtrdz_inferred_gpoints_2013_01_clr.nc
8. cf_wf_2013_annualmean_globalmean_total_fir_all.nc
9. cre_olr_fir_mir_sfc_atm_layers_2013_annualmean.nc
10. cre_raddp_fluxdp_4d_2013_annualmean_all_clr.nc
11. tr_inferred_band_2013_annualmean_all_clr.nc
12. tr_estimatedbyemission_and_kernel_2013_annual_all.nc


1. total OLR, FIR, MIR at the TOA, ATM or SFC, with the postfix of _clr in variable's name representing results in clear sky (figure2, table1, figure6, figrueS8). 
2. total OLR, FIR, MIR in the  ATM, in the troposphere or stratosphere (figureS12)
3. radiance intensity and flux intensity per 100hPa thickness layer in the ATM, and vertical integrated ATM contribution and SFC contribution in each spectral band (figire3, figure5, figureS9, figureS10, figureS11)
4-6 optical depth (tau), transmittance (tr), weighting function (dtr/dp, dtr/dz) in different bands (figure3, figureS3, figureS6,figureS9)
7. transmittance (tr) and weighting function (dtr/dz) from the inferred method or averaged from the g-points in Jan 2013 in clear sky, with the postfix _g calculated from the g-points (figureS5).
8. contribution function (eq. 4) and weighting function (eq. 5) (figure 4)
9. cloud radaitive forcing in total OLR, fir and mir at the TOA, ATM (whole ATM+different layers) or SFC (figure9, figureS13, tableS2)
10. CRE of radiance intensity and flux intensity per 100hPa thickness layer in the ATM, and vertical integrated ATM contribution and SFC contribution in each spectral band (figure7, figure8)
11. atmospheric tranmittance in different spectral bands (figure S4)
12. estimated tr using emission and kernel and surface contribution (figure S7)
DOI: 10.5281/zenodo.4454538
title: Data set supplementing "Benchmarking triage capability of symptom checkers against that of medical laypersons: Survey study"

description: This is the de-identified data set used to conduct the analyses in the study published as Original Research in the JMIR under the title "Benchmarking triage capability of symptom checkers against that of medical laypersons: Survey study" (https://doi.org/10.2196/24475) The data set contains the assessments of the urgency of symptoms to 45 fictitious clinical case vignettes by 91 US participants, and the participants' age, gender and level of education. Data for the symptom checker apps is needed to fully reproduce our study and can be found in the appendix of the paper "Evaluation of symptom checkers for self diagnosis and triage: audit study" by Semigran et al. (2015) (https://doi.org/10.1136/bmj.h3480).