cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17900730
title: Dataset for article "Goal-directed shaping of cortical waves"

description: Institution: Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay (NeuroPSI), 91400,Saclay, France. 

Isabelle Ferezou and Luc Estebanez are co-last authors. Correspondence: luc.estebanez@cnrs.fr, mail@dogadov.fr

BioRxiv DOI: https://doi.org/10.1101/2024.09.10.612344

Abstract

At the surface of the cerebral cortex, the dynamics of brain activity at the mesoscopic scale are characterized by waves of synchronized neuronal activity. These waves have been shown to impact the processing of sensory information, but can they be actively shaped by the subject in a goal directed manner? To address this question, we designed a fast widefield optical brain-machine interface for mice that can detect and reinforce individual traveling waves, which follow a specific displacement at the surface of the somatosensory cortex. Trained mice learned to generate these Conditioned Waves, which became progressively more stereotyped. The Conditioned Waves resulted from a reshaping of the cortical activity associated with limb movements, which included a sharp pre-movement cortical suppression that emerged with learning. Our work demonstrates that traveling cortical waves of neuronal activity can be subject to operant control. It provides evidence for the plasticity and functional relevance of large-scale cortical dynamics, and establishes a new paradigm for manipulating mesoscale brain activity.

Dataset

Wave dataset

The dataset consists of a set of .mat files acquired on multiple consecutive training days, in 16 mice. To access the data in the .mat files, Matlab should include in its path the class definitions found in the Class_description.zip file.

For each session contained in the .mat file names with unique identifier YEAR-MONTH-DAY-HOUR_MINUTE_SECOND of the corresponding experiment, there are several fields, and in particular including:

Waves: the listing of all waves that took place at the surface of the cortex during the recording. 

RewardableWaves: waves that filled the requirement for reward. 

the wave structure includes the time of occurence, path at the surface of the cortex, and strength of the wave. 

Reference: a construct that includes a reference blue and green image, the mask that delineates the cortical window, and the ROIs that are used in the operant conditionning, enabling to identify the condition that is trained on a given session. 

Mesoscale calcium imaging dataset

In addition to this systematic dataset, the full calcium image time series acquired on the first and best performance session in Mouse 12 have been also provided. The cortical wave trajectories are derived from the analysis of these raw images.
DOI: 10.15468/dl.52s9bt
title: Occurrence Download

description: A dataset containing 150 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Moenkhausia lata"
 ]
}

 The dataset includes 150 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048094-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/26728
title: Chandra X-ray Observatory ObsId 26728

description: A Chandra view of massive Post-Starburst Galaxies
DOI: 10.15468/dl.h38qdj
title: Occurrence Download

description: A dataset containing 3354 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Byrsonima crassifolia",
 "HasCoordinate is true",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 3354 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048095-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/tryza8
title: PAN-00104900 - coin/coin-related, Quintillus (270)/Aurelianus (270- 275), voor Divus Claudius II, antoninianus

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00104900&lt;/p&gt;
description: Modified: 2025-05-06T16:26:47+02:00
DOI: 10.15468/dl.u8gfgs
title: Occurrence Download

description: A dataset containing 427404 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Canadian Museum of Nature Herbarium"
 ]
}

 The dataset includes 427404 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048091-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yy868c
title: Occurrence Download

description: A dataset containing 14792 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spheniscus humboldti"
 ]
}

 The dataset includes 14792 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048096-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.scr95h
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Parafusulina rothi"
 ]
}

 The dataset includes 44 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048098-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ve3ywg
title: Occurrence Download

description: A dataset containing 38338 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spheniscus magellanicus"
 ]
}

 The dataset includes 38338 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048099-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/dfnp4l
title: PAN-00017166 - blade

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00017166&lt;/p&gt;
description: Modified: 2025-07-08T10:24:56+02:00
DOI: 10.15468/dl.p9as57
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carpodiptera ameliae",
 "HasCoordinate is true",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048100-251120083545085/datasets/export for details.
DOI: 10.7266/f0qgx7q6
title: Daily temperature, salinity, and velocity components from a one-way nested FVCOM-LCFE simulation, Loop Current System, from 2009-04-11 to 2009-05-09
DOI: 10.5281/zenodo.17512868
title: Dataset for: Using multilayer socioecological networks to assess ecosystem service flow in a subsistence farming community in Papua New Guinea

description: These datasets contain information from 40 household interviews with members of the Ohu community, Madang in August 2023. Information includes:

Stanworth_et_al_frugivory_data.xlsx: Xlsx file with information about frugivorous interactions between frugivore bird and bat species and plants, formatted as an interaction network edge list.

Stanworth_et_al_plant_benefit_data.xlsx: Xlsx file with information about the uses of each plant species, formatted as an interaction network edge list.

Stanworth_et_al_farmer_plant_data.xlsx: Xlsx file with information about which plants individual farmers cultivate or harvest, formatted as an interaction network edge list.

Stanworth_et_al_socioecological_network_README.pdf: README file outlining data files and variables.

Stanworth_et_al_frugivory_Metadata.xlsx: Xlsx file with metadata information for Stanworth_et_al_frugivory_data.xlsx file.

Stanworth_et_al_plant_benefit_Metadata.xlsx: Xlsx file with metadata information for Stanworth_et_al_plant_benefit_data.xlsx file.

Stanworth_et_al_farmer_plant_Metadata.xlsx: Xlsx file with metadata information for Stanworth_et_al_farmer_plant_data.xlsx file.
DOI: 10.5281/zenodo.17512867
title: Dataset for: Using multilayer socioecological networks to assess ecosystem service flow in a subsistence farming community in Papua New Guinea

description: These datasets contain information from 40 household interviews with members of the Ohu community, Madang in August 2023. Information includes:

Stanworth_et_al_frugivory_data.xlsx: Xlsx file with information about frugivorous interactions between frugivore bird and bat species and plants, formatted as an interaction network edge list.

Stanworth_et_al_plant_benefit_data.xlsx: Xlsx file with information about the uses of each plant species, formatted as an interaction network edge list.

Stanworth_et_al_farmer_plant_data.xlsx: Xlsx file with information about which plants individual farmers cultivate or harvest, formatted as an interaction network edge list.

Stanworth_et_al_socioecological_network_README.pdf: README file outlining data files and variables.

Stanworth_et_al_frugivory_Metadata.xlsx: Xlsx file with metadata information for Stanworth_et_al_frugivory_data.xlsx file.

Stanworth_et_al_plant_benefit_Metadata.xlsx: Xlsx file with metadata information for Stanworth_et_al_plant_benefit_data.xlsx file.

Stanworth_et_al_farmer_plant_Metadata.xlsx: Xlsx file with metadata information for Stanworth_et_al_farmer_plant_data.xlsx file.
DOI: 10.17026/ar/agxaq4
title: PAN-00177382 - arched bow brooch D

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00177382&lt;/p&gt;
description: Modified: 2025-07-21T17:12:51+02:00
DOI: 10.15468/dl.c7gn7y
title: Occurrence Download

description: A dataset containing 432 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "GadmGid is USA.5_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Ludwigia hexapetala"
 ]
}

 The dataset includes 432 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048101-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/xcbjci
title: PAN-00138984 - Roman stylus type P

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00138984&lt;/p&gt;
description: Modified: 2025-06-09T16:28:15+02:00
DOI: 10.17026/ar/0aexu2
title: PAN-00055320 - iron nail general

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00055320&lt;/p&gt;
description: Modified: 2025-07-17T11:11:04+02:00
DOI: 10.15468/dl.xzaqp8
title: Occurrence Download

description: A dataset containing 624 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is South America",
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Felidae",
 "Year 2025-2025"
 ]
}

 The dataset includes 624 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048102-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/kegnpe
title: PAN-00174369 - strap mount Early Modern horse gear group A

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00174369&lt;/p&gt;
description: Modified: 2025-05-15T16:21:25+02:00
DOI: 10.5517/ccdc.csd.cc249wq2
title: CCDC 1975714: Experimental Crystal Structure Determination

description: Related Article: Yulia Olegovna Pupkova,  Olga Konstantinovna Sharutina,  Vladimir Viktorovich Sharutin|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|80-3|doi:10.14529/chem250307
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24l2rl
title: CCDC 1983589: Experimental Crystal Structure Determination

description: Related Article: Vladimir Viktorovich Sharutin|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|182-3|doi:10.14529/chem250319
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24q0hd
title: CCDC 1987363: Experimental Crystal Structure Determination

description: Related Article: A. S. Popova,  A. D. Maximova,  D. R. Chernyavskiy,  N. V. Cherkashina,  M. V. Panina,  O. V. Sulimova,  E. A. Sosunov,  P. V. Dorovatovskii,  M. N. Vargaftik,  I. A. Yakushev|2025|J.Struct.Chem.|66|1922|doi:10.1134/S0022476625090148
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc256wcn
title: CCDC 2002611: Experimental Crystal Structure Determination

description: Related Article: Jungwoo Hong, Jaewook Kim, Jintaek Gong, Seoneun Jeong, Yi Sak Park, Sung Hyun Yoo, Jin Kim, Hee-Seung Lee|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c13858
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25v9w7
title: CCDC 2021289: Experimental Crystal Structure Determination

description: Related Article: Jungwoo Hong, Jaewook Kim, Jintaek Gong, Seoneun Jeong, Yi Sak Park, Sung Hyun Yoo, Jin Kim, Hee-Seung Lee|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c13858
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26n513
title: CCDC 2045164: Experimental Crystal Structure Determination

description: Related Article: Vladimir Viktorovich Sharutin,  Andrey Nikolaevich Efremov,  Dmitry Pavlovich Shevchenko|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|57-3|doi:10.14529/chem250304
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26rk4p
title: CCDC 2048422: Experimental Crystal Structure Determination

description: Related Article: Jungwoo Hong, Jaewook Kim, Jintaek Gong, Seoneun Jeong, Yi Sak Park, Sung Hyun Yoo, Jin Kim, Hee-Seung Lee|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c13858
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26tjn7
title: CCDC 2050329: Experimental Crystal Structure Determination

description: Related Article: Vladimir Viktorovich Sharutin|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|106-3|doi:10.14529/chem250310
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26tv85
title: CCDC 2050627: Experimental Crystal Structure Determination

description: Related Article: Vladimir Viktorovich Sharutin|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|113-3|doi:10.14529/chem250311
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2707tb
title: CCDC 2055821: Experimental Crystal Structure Determination

description: Related Article: Vladimir Viktorovich Sharutin|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|113-3|doi:10.14529/chem250311
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27q48d
title: CCDC 2076853: Experimental Crystal Structure Determination

description: Related Article: Vladimir Viktorovich Sharutin|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|106-3|doi:10.14529/chem250310
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27yq0y
title: CCDC 2084130: Experimental Crystal Structure Determination

description: Related Article: Vladimir Viktorovich Sharutin,  Andrey Nikolaevich Efremov|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|88-3|doi:10.14529/chem250308
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j7497
title: CCDC 2330558: Experimental Crystal Structure Determination

description: Related Article: Peng He, Hebo Ye, Shuaipeng Jia, Qinhua Rao, Yong Zhou, Lei You|2024|CCS Chem.|7|1698|doi:10.31635/ccschem.024.202404373
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j74b8
title: CCDC 2330559: Experimental Crystal Structure Determination

description: Related Article: Peng He, Hebo Ye, Shuaipeng Jia, Qinhua Rao, Yong Zhou, Lei You|2024|CCS Chem.|7|1698|doi:10.31635/ccschem.024.202404373
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j82yv
title: CCDC 2331477: Experimental Crystal Structure Determination

description: Related Article: Vladimir Viktorovich Sharutin|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|47-3|doi:10.14529/chem250303
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j9804
title: CCDC 2332595: Experimental Crystal Structure Determination

description: Related Article: Vladimir Viktorovich Sharutin|2025|Yuzhno-Ural'skii Gosudarst. Univ.Vestn. Ser.Khim.|17|47-3|doi:10.14529/chem250303
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jh709
title: CCDC 2338330: Experimental Crystal Structure Determination

description: Related Article: Xiaozheng Wei, Mukandila Mulumba, Sylvain Chemtob, Huy Ong, William D. Lubell|2025|J.Med.Chem.|||doi:10.1021/acs.jmedchem.5c01693
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jjv42
title: CCDC 2339884: Experimental Crystal Structure Determination

description: Related Article: Hiroki Kameda, Katsuhiko Moriyama|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c03952
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jjxll
title: CCDC 2339960: Experimental Crystal Structure Determination

description: Related Article: Marian E. Powderly, Toby Lindup, Edward H. Jackman, Mark E. Light, Julien Legros, Isabelle Chataigner, David C. Harrowven|2025|Chem.Commun.|61|19229|doi:10.1039/d5cc05185a
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.