cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21695147
title: Supplementary Material for: Chronic Rhinosinusitis in Patients with Primary Immunodeficiency

description: <b><i>Introduction:</i></b> Primary immunodeficiencies are a heterogeneous group of diseases associated with an increased incidence of infections, autoimmunity, autoinflammatory diseases, allergies, and cancer. Rhinosinusitis is one of the most common infections in these patients. In our study, we aimed to determine the presence of chronic rhinosinusitis in our patients with primary immunodeficiency and to investigate the etiology of chronic rhinosinusitis. <b><i>Methods:</i></b> Forty-four patients (age range: 4–26 years) diagnosed with primary immunodeficiency were enrolled in our study. Patients were interviewed about the symptoms of chronic rhinosinusitis, and nasal endoscopic examinations were performed prospectively. The results of laboratory tests, medications, skin allergy tests, and the patients’ lung computed tomography were retrospectively recorded from patient files. <b><i>Results:</i></b> The distribution of patients’ diagnoses included 38.6% (<i>n</i> = 17) primary antibody deficiencies, 6.6% (<i>n</i> = 3) combined immunodeficiencies, 27.3% (<i>n</i> = 12) combined immunodeficiencies with syndromic features, 6.8% (<i>n</i> = 3) phagocytic disorders, and 20.5% (<i>n</i> = 9) immune dysregulation disorders. There was no significant difference in the frequency of chronic rhinosinusitis among the different immunodeficiency groups. There were no significant differences between chronic rhinosinusitis and conditions such as atopy, hypogammaglobulinemia, and treatments with immunoglobulin and/or azithromycin. The incidence of chronic rhinosinusitis was 77.8% (<i>n</i> = 7) in patients with a history of acute sinusitis and 20% (<i>n</i> = 7) in patients without a history of sinusitis, with a statistically significant difference between them (<i>p</i> = 0.002). <b><i>Conclusion:</i></b> Chronic rhinosinusitis is more common in patients with primary immunodeficiencies than in the normal population. For effective treatment, it is necessary to identify the factors that cause chronic rhinosinusitis. Further studies involving larger patient populations are needed to explain the mechanisms of chronic rhinosinusitis.
DOI: 10.6084/m9.figshare.21695165
title: Supplementary Material for: Predictive Intelligent Control of Oxygenation in Preterm Infants: A Two-Center Feasibility Study

description: <b><i>Introduction:</i></b> Supplemental oxygen therapy is a mainstay of modern neonatal intensive care for preterm infants. However, both insufficient and excess oxygen delivery are associated with adverse outcomes. Automated or closed loop FiO<sub>2</sub> control has been developed to keep SpO2 within a predefined target range more effectively. <b><i>Methods:</i></b> The aim of this study was to investigate the feasibility of closed loop FiO<sub>2</sub> control by Predictive Intelligent Control of Oxygenation (PRICO) on the Fabian ventilator in maintaining SpO2 within a target range (88/89-95%) in preterm infants on different modes of invasive and noninvasive respiratory support. In two tertiary neonatal intensive care units, preterm infants with an FiO<sub>2</sub> &gt;0.21 were included and received an 8 h nonblinded treatment period of closed loop FiO<sub>2</sub> control by PRICO, flanked by two 8 h control periods of routine manual control (RMC1 and RMC2). <b><i>Results:</i></b> 32 preterm infants were included (median gestational age 26 + 5 weeks [IQR 25 + 5–27 + 6], median birthweight 828 grams [IQR 704–930]). Six patients received invasive respiratory support, while 26 received noninvasive respiratory support (18 CPAP, 4 DuoPAP, and 4 nasal IMV). The time percentage within the SpO2 target range was increased with PRICO (74.4% [IQR 67.8–78.5]) compared to RMC1 (65.8% [IQR 51.1–77.8]; <i>p</i> = 0.011) and RMC2 (60.6% [IQR 56.2–66.6]; <i>p</i> &lt; 0.001) with an estimated median difference of 6.0% (95% CI 1.2–11.5) and 9.8% (95% CI 6.0–13.0), respectively. <b><i>Conclusion:</i></b> In preterm infants on invasive and noninvasive respiratory supports, closed loop FiO<sub>2</sub> control by PRICO compared to RMC is feasible and superior in maintaining SpO2 within target ranges.
DOI: 10.6084/m9.figshare.21696284
title: Supplementary Material for: Association of Intravenous Tirofiban with Functional Outcomes in Acute Ischemic Stroke Patients with Acute Basilar Artery Occlusion Receiving Endovascular Thrombectomy

description: <b><i>Introduction:</i></b> The aim of this study was to test the hypothesis that intravenous tirofiban improves functional outcomes without promoting the risk of intracranial hemorrhage (ICH) in stroke secondary to basilar artery occlusion (BAO) receiving endovascular thrombectomy. <b><i>Methods:</i></b> Patients with acute BAO stroke who were treated with endovascular thrombectomy and had tirofiban treatment information were derived from “BASILAR”: a nationwide, prospective registry. All eligible patients were divided into tirofiban and no-tirofiban groups according to whether tirofiban was used intravenously. The primary endpoint was the 90-day severity of disability as assessed by the modified Rankin scale score. Safety outcomes were the frequency of ICH and mortality. <b><i>Results:</i></b> Of 645 patients included in this cohort, 363 were in the tirofiban group and 282 were in the no-tirofiban group. Thrombectomy with intravenous tirofiban reduced the 90-day disability level over the range of the modified Rankin scale (adjusted common odds ratio, 2.08; 95% confidence interval (CI), 1.45–2.97; <i>p</i> &lt; 0.001). The 90-day mortality of patients in the tirofiban group was lower than that in the no-tirofiban group (41.6% vs. 52.1%; adjusted hazard ratio, 0.60; 95% CI, 0.47–0.77; <i>p</i> &lt; 0.001). The frequency of any ICH (6.7% vs. 13.7%; <i>p</i> = 0.004) and symptomatic ICH (4.8% vs. 10.1%; <i>p</i> = 0.01) in the tirofiban group was significantly lower than that in the no-tirofiban group. <b><i>Conclusions:</i></b> In patients with acute BAO stroke who underwent endovascular treatment, intravenous tirofiban might be associated with favorable outcome, reduced mortality, and a decreased frequency of ICH.
DOI: 10.25549/hancock-c82-14439
title: Revision of the nemertean fauna of the Pacific coasts of North, Central, and northern South America
DOI: 10.5281/zenodo.1118386
title: Database Of Ultrasonic Transducer Radiation Characteristics

description: Database of measurements of different properties of ultrasonic transducers of different types.


	On-axis frequency response measurements of multiple copies of the same transducer model, measured between 20 kHz and 160 kHz in an anechoic space. 
	Directivity patterns of multiple copies of the same transducer model, measured for every degree in an anechoic space. Calculated for every 10 Hz between 20 kHz and 160 kHz.
	Frequency response measurements for every degree for a single transducer of each type, measured between 20 kHz and 160 kHz in an anechoic space.


The datasets are stored in HDF5 files created using h5py. An example Jupyter notebook is included to show how the plots were created.

 

The transducers measured are:


	Murata MA40S4S
	Camdenboss CDT40K1007T
	Multicomp MCUST10P40B07RO
	Multicomp 400PT16P
	Multicomp MCUSD14A40S09RS
	Multicomp MCUSD14A48S09RS
	Multicomp MCUSD14A58S09RS
DOI: 10.6084/m9.figshare.13720546
title: Tracking momentary fluctuations in human attention with a cognitive brain-machine interface

description: Data and scripts necessary for reproducing all figures in the paper titled, "Tracking momentary fluctuations in human attention with a cognitive brain-machine interface". <br> The paper is accepted and published in Nature Communications Biology. DOI: https://doi.org/10.1038/s42003-022-04231-w
DOI: 10.6084/m9.figshare.21695159
title: Supplementary Material for: Evolution of Bullous Pemphigoid Clinical Pattern over Time: A 17-Year Single-Centre Retrospective Survey of 312 Cases

description: <b><i>Background and Objectives:</i></b> Bullous pemphigoid (BP) clinical profile may have evolved during the last 2 decades. A retrospective, single-centre analysis investigated a possible shift of clinical presentation of the disease over time regarding both lesions’ clinical pattern and locations and more particularly an increased frequency of characteristics considered as less classical regarding the usual clinical description of BP. <b><i>Patients and Methods:</i></b> Initial clinical data from all BP patients treated between January 2001 and April 2017 in a reference centre were collected and compared between four 4-year successive chronological subsets (G1 to G4). <b><i>Results:</i></b> 213/312 patients retained for final analysis (68.3%) displayed at least one initial non-classical characteristic, mainly head and neck, palmo-plantar, and/or mucosal involvement. Chronological analysis confirmed a significant increase over time of the percentage of patients displaying such features (G1 57.9% vs. G4 73.7%, <i>p</i> = 0.041). <b><i>Conclusion:</i></b> Changes in BP clinical pattern may have occurred over the last two decades with the progressive emergence of forms with a number of less classical features. No significant clinical difference was observed between patients receiving or not DPP4 inhibitors at the time of diagnosis.
DOI: 10.6084/m9.figshare.21695189
title: Supplementary Material for: Combination of Two Behavioral Techniques Reduces Craving in Problematic Alcohol Consumption by One Third: A Randomized Controlled Trial

description: <b><i>Introduction:</i></b> Craving alcohol is a core symptom of alcohol use disorder (AUD) and an important target for treatment. A new line of treatment for AUD aims at overriding the urge to consume alcohol by changing implicit cognitions via approach bias modification (ApBM). In a prior study, we tested a variant of ApBM called imaginal retraining, which reduced craving. As addiction and body-focused repetitive behaviors (BFRBs) share important symptoms (e.g., inability to resist urges), for the present study we merged imaginal retraining with a technique aimed at BFRB, called decoupling, to augment treatment effects. We hypothesized that the new technique, which is called 3P, would lead to a greater reduction in craving relative to (active) control conditions. <b><i>Methods:</i></b> The study was conducted online. Data from 227 participants were considered. Participants were randomized to 1 out of 5 conditions. Craving for alcohol before and after the brief intervention was the primary outcome. <b><i>Results:</i></b> Only the 3P condition lessened craving by approximately one third at an almost medium effect size (improvement: 34.5%, <i>p</i> = 0.003, <i>d</i> = 0.458). Effects were significantly larger relative to the wait-list control and two active control conditions (<i>p</i>’s &lt; 0.02; greater reduction than imaginal retraining at a small but nonsignificant effect size). <b><i>Discussion/Conclusion:</i></b> If replicated, the combination of imaginal retraining and decoupling (3P) represents a promising, easy-to-implement self-help technique to reduce immediate craving. Long-term effects in participants with formally diagnosed AUD have not yet been investigated.
DOI: 10.17632/m4dt3z68s5.1
title: Lipidome alterations in human prefrontal cortex during development, aging, and cognitive disorders. Yu et al.

description: DS1 represents the untargeted LC-MS measurement of lipidome composition of prefrontal cortex gray matter in 452 samples from 396 cognitively healthy individuals with ages spanning 100 years, as well as 16 autism, 26 schizophrenia and 5 Down syndrome patients. Measured using Orbitrap-XL, Thermo-Fisher, Germany, in both positive and negative ionization modes. Peak calling was done using Progenesis QI for data of positive and negative ionization modes separately. Peaks detected in at least 80% of the non-pooled samples and 90% of the pooled samples were retained. Log10-transformed peak intensities were normalized using quantile normalization. PFC transcriptomes of 72 selected individuals from the 396 ones measured in DS1 were measured by Illumina HiSeq 4000. The paired-ended reads were mapped to human genome hg38 using HiSat2, with reads overlapping with protein-coding genes annotated in GENCODE v24 using htseq-count and normalized using DESeq2. DS2 represents PFC lipidome measurement of 33 autism patients with their transcriptome measured in Liu et al. 2016. Peak calling was done using Progenesis QI with intensities normalized with upper-quartile normalization.
DOI: 10.18739/a2222r54h
title: Taku Glacier borehole data, Alaska, 2014-2016
DOI: 10.18739/a2c24qm7x
title: GPS data from Taku Glacier, Alaska, 2014-2016
DOI: 10.18739/a2tp3n
title: Taku Glacier ablation measurements, Alaska. 2014-2016
DOI: 10.18739/a2vs2m
title: Taku Glacier, Southeast Alaska aerial photogrammetry, August 2, 2015
DOI: 10.5066/f78c9tdm
title: Climatic controls on the global distribution, abundance, and species richness of mangrove forests

description: Mangrove forests are highly productive tidal saline wetland ecosystems found along sheltered tropical and subtropical coasts. Ecologists have long assumed that climatic drivers (i.e., temperature and rainfall regimes) govern the global distribution, structure, and function of mangrove forests. However, data constraints have hindered the quantification of direct climate-mangrove linkages in many parts of the world. Recently, the quality and availability of global-scale climate and mangrove data have been improving. Here, we used these data to better understand the influence of air temperature and rainfall regimes upon the distribution, abundance, and species richness of mangrove forests. Although our analyses identify global-scale relationships and thresholds, we show that the influence of climatic drivers is best characterized via regional range limit-specific analyses. We quantified climatic controls across targeted gradients in temperature and/or rainfall within 14 mangrove distributional range limits. Climatic thresholds for mangrove presence, abundance, and species richness differed among the 14 studied range limits. We identified minimum temperature-based thresholds for range limits in eastern North America, eastern Australia, New Zealand, eastern Asia, eastern South America, and southeast Africa. We identified rainfall-based thresholds for range limits in western North America, western Gulf of Mexico, western South America, western Australia, Middle East, northwest Africa, east central Africa, and west central Africa. Our results show that in certain range limits (e.g., eastern North America, western Gulf of Mexico, eastern Asia), winter air temperature extremes play an especially important role. We conclude that rainfall and temperature regimes are both important in western North America, western Gulf of Mexico, and western Australia. With climate change, alterations in temperature and rainfall regimes will affect the global distribution, abundance, and diversity of mangrove forests. In general, warmer winter temperatures are expected to allow mangroves to expand poleward at the expense of salt marshes. However, dispersal and habitat availability constraints may hinder expansion near certain range limits. Along arid and semi-arid coasts, decreases or increases in rainfall are expected to lead to mangrove contraction or expansion, respectively. Collectively, our analyses quantify climate-mangrove linkages and improve our understanding of the expected global- and regional-scale effects of climate change upon mangrove forests.
DOI: 10.5281/zenodo.5665051
title: Description2Code Dataset

description: Description2Code is dataset of ~7764 programming challenges scraped in 2016.
DOI: 10.5281/zenodo.6450546
title: Dataset on 5 Feb 2022

description: Gas data, temperature data, and wind data were collected on 5 Feb 2022 in no.3209 coal mine.
DOI: 10.5281/zenodo.6450554
title: Dataset on 6 Feb 2022

description: Gas data, temperature data, and wind data collected on 6 Feb 2022 in no.3209 coal mine.
DOI: 10.5904/wgms-fog-2018-11
title: FLUCTUATIONS OF GLACIERS DATABASE

description: Internationally collected, standardized dataset on changes in glaciers (length, area, volume, mass), based on in-situ and remotely sensed observations, as well as on reconstructions.
DOI: 10.6084/m9.figshare.19947758.v2
title: Potential Carotenoids as Anti-aging from Female Grapsus albolineatus

description: Data Docking and Pigment
DOI: 10.6084/m9.figshare.21688676
title: Supplementary Material for: Do Proximal Risk Factors Mediate the Impact of Affect on Symptoms of Generalized Anxiety Disorder and Major Depressive Disorder? An Extension of the Hierarchical Model of Cognitive Vulnerability

description: <b><i>Background:</i></b> Major depressive disorder (MDD) and generalized anxiety disorder (GAD) are among the most prevalent forms of psychopathology. The hierarchical model of cognitive vulnerability proposes that higher order risk factors explain co-occurrence among internalizing disorders, whereas lower order risk factors explain discordance. <b><i>Methods:</i></b> Participants (<i>N</i> = 646; mean age = 38.50, SD = 10.00; 49.2% female) were recruited from Amazon MTurk to complete self-report questionnaires related to psychopathology in the summer of 2020. Structural equation modeling was used to examine the relations that negative affect (NA) and positive affect (PA) share with MDD and GAD, through rumination and intolerance of uncertainty (IU), cross-sectionally. <b><i>Results:</i></b> When modeling both IU and depressive rumination together as explaining the indirect effects from affect to psychopathology, the association between NA and symptoms of MDD was explained by depressive rumination. There were no indirect effects from PA to MDD or GAD symptoms. When modeled separately, both risk factors explained the associations NA shared with MDD and GAD symptoms. <b><i>Conclusions:</i></b> The present study extends the hierarchical model of cognitive vulnerability by finding that depressive rumination explains the association between NA and symptoms of MDD, even when controlling for IU.
DOI: 10.6084/m9.figshare.21695225
title: Supplementary Material for: Prospective, Randomized Comparative Evaluation of a Novel Hands-On Endourology Training Curriculum

description: <b><i>Introduction:</i></b> The aim of this randomised prospective trial was to evaluate a novel hands-on endourological training programme (HTP) and compare it to the standard endourological colloquium (SC). <b><i>Methods:</i></b> A new HTP was created based on a sequence of theoretical, video-based, and practical elements emphasising contemporary teaching methods. An existing SC in which live endourological operations were attended served as a comparison. Medical students were enrolled in a ratio of 1:2 (SC:HTP). Objective knowledge questionnaires (5 questions, open answers) and subjective Likert-type questionnaires (rating 1–3 vs. 4–5) were used for evaluation. Primary endpoint was urological knowledge transfer; secondary endpoints were learning effects, progression, and urological interest. <b><i>Results:</i></b> 167 students (SC <i>n</i> = 52, HTP <i>n</i> = 115) were included. The knowledge assessment showed a significant increase in knowledge transfer benefitting the HTP on all 5 surveyed items (mean: <i>n</i> = 4/5/4/3/2 vs. <i>n</i> = 2/3/1/1, <i>p</i> &lt; 0.0001). Interest and duration of the course were rated significantly more positively by HTP students (100.0/95.0% vs. 85.0/70.0%, <i>p</i> &lt; 0.0001). The HTP students were significantly more confident in performing a cystoscopy independently (HTP 43.5% vs. SC 11.5%, <i>p</i> &lt; 0.0001) and significantly claimed more often to have gained interdisciplinary and urological skills during the course (HTP 90.0/96.5% vs. SC 23.1/82.7%, <i>p</i> &lt; 0.0001/<i>p</i> = 0.003). HTP students were also more likely to take the course again (HTP 98.2% vs. SC 59.6%, <i>p</i> &lt; 0.0001). <b><i>Conclusion:</i></b> Modifying endourological teaching towards hands-on teaching resulted in stronger course interest, greater confidence regarding endourologic procedures, and significantly increased urologic knowledge transfer.
DOI: 10.15124/707baa95-44e0-4f55-9476-ef1097b0a668
title: Highly efficient conversion of laser energy to hard X-rays in high intensity laser-solid simulations
DOI: 10.17632/dkcfwxzc4d.1
title: Supporting Information for Oligocene/early Miocene E/W-shortening in the Oman Mountains related to oblique Arabia-India convergence

description: This data set contains information about field measurements and U-Pb on calcite measurements of "Oligocene/early Miocene E/W-shortening in the Oman Mountains related to oblique Arabia-India convergence"
DOI: 10.6084/m9.figshare.21205547.v4
title: Supplementary material to Brands (2022): Common error patterns in the regional atmospheric circulation simulated by the CMIP multi-model ensemble, GRL

description: This is the supplementary material to the research article: Brands S (2022): Common error patterns in the regional atmospheric circulation simulated by the CMIP multi-model ensemble, GRL <br> For further informaion, please see the README.txt file.
DOI: 10.6084/m9.figshare.21513903
title: frequency_response.m

description: In this code we simulate the frequency response of the OIL laser.
DOI: 10.6084/m9.figshare.21513909
title: Hjw.m

description: In this code we built the transfer function of the OIL laser.
DOI: 10.6084/m9.figshare.21513927
title: inequalitysweep_alpha.m

description: In this code the inequalities for generating complex area have been simulated.
DOI: 10.6084/m9.figshare.21513975
title: RateEq_OIL_Carrier.m

description: The Rate- equations for the OIL laser
DOI: 10.17188/1201440
title: Materials Data on TbSb by Materials Project

description: TbSb is Halite, Rock Salt structured and crystallizes in the cubic Fm-3m space group. The structure is three-dimensional. Tb3+ is bonded to six equivalent Sb3- atoms to form a mixture of edge and corner-sharing TbSb6 octahedra. The corner-sharing octahedral tilt angles are 0°. All Tb–Sb bond lengths are 3.11 Å. Sb3- is bonded to six equivalent Tb3+ atoms to form a mixture of edge and corner-sharing SbTb6 octahedra. The corner-sharing octahedral tilt angles are 0°.
DOI: 10.17188/1262913
title: Materials Data on GdSb by Materials Project

description: GdSb is Halite, Rock Salt structured and crystallizes in the cubic Fm-3m space group. The structure is three-dimensional. Gd3+ is bonded to six equivalent Sb3- atoms to form a mixture of edge and corner-sharing GdSb6 octahedra. The corner-sharing octahedral tilt angles are 0°. All Gd–Sb bond lengths are 3.15 Å. Sb3- is bonded to six equivalent Gd3+ atoms to form a mixture of edge and corner-sharing SbGd6 octahedra. The corner-sharing octahedral tilt angles are 0°.
DOI: 10.17632/fc2kscztmv.1
title: Goosander_vs_Fishermen

description: Marchowski D., Flis A., Gwiazda R., Kavetska K.M., Wysocki D. 2021. The dominant species of piscivorous bird does not adversely affect fishery in the lagoons of the southern Baltic Sea. Data set.
DOI: 10.25405/data.ncl.16855699.v1
title: Simulation results from the paper "A Discrete Ternary Population State Model of extinctions in ecological networks"

description: Data here describes all figures from the paper "A Discrete Ternary Population State Model of extinctions in ecological networks"
DOI: 10.5281/zenodo.4696060
title: Synthetic building performance data

description: A dataset of uncertainty-infused synthetic building performance profiles as hallucinated by a generative adversarial network (GAN). This dataset includes both the original building performance data, as well as 50 synthetic performance scenarios that are generated by a GAN. Further details on the method and codes can be found here: https://github.com/Khayatian/seer