cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/1kqtd-r0m09
title: Coxiella burnetii_wt_D15

description: Nine Mile phase II clone 4 (NMIIC4) strain. Wild-type cells day-15  culture.
description: <strong>Tilt Series Date:</strong> 2016-11-04</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Coxiella burnetii</p>
<strong>Strain:</strong> Nine Mile phase II clone 4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in Robert Heinzen's lab @NIAID and ~50 ul cells were sent to us.</p>
<strong>Sample Preparation:</strong> Refer to Heinzen lab</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-104/rawdata/</p>15D_Pos4_atlas20075.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-104/rawdata/15D_Pos4_atlas20075.mrc"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20075_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-104/3dimage_108152/15D_Pos4_atlas20075_SIRT_1k.rec"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20075.ali,  577.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-104/file_24584/15D_Pos4_atlas20075.ali"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20075.tlt,  648.0 B  
        
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        15D_Pos4_atlas20075_fid.tlt,  648.0 B  
        
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DOI: 10.5281/zenodo.16929391
title: THEORETICAL APPROACHES TO THE POETICS OF THE SHORT STORY

description: This article explores the poetics of the short story through various theoretical lenses, including formalism, structuralism, narratology, reader-response theory, and cultural criticism. It examines how the short story’s brevity, suggestiveness, and narrative economy shape its artistic form. The study argues that the short story is not a miniature novel, but a distinct literary genre with its own internal principles. Special attention is given to the role of silence, reader interpretation, and genre flexibility, as well as to the short story’s cultural and political significance. The article concludes that the poetics of the short story lie in its ability to produce rich, complex meaning within strict spatial limits.
DOI: 10.5281/zenodo.16929392
title: THEORETICAL APPROACHES TO THE POETICS OF THE SHORT STORY

description: This article explores the poetics of the short story through various theoretical lenses, including formalism, structuralism, narratology, reader-response theory, and cultural criticism. It examines how the short story’s brevity, suggestiveness, and narrative economy shape its artistic form. The study argues that the short story is not a miniature novel, but a distinct literary genre with its own internal principles. Special attention is given to the role of silence, reader interpretation, and genre flexibility, as well as to the short story’s cultural and political significance. The article concludes that the poetics of the short story lie in its ability to produce rich, complex meaning within strict spatial limits.
DOI: 10.22002/hd0pm-y8q82
title: Coxiella burnetii_wt_D15

description: Nine Mile phase II clone 4 (NMIIC4) strain. Wild-type cells day-15  culture.
description: <strong>Tilt Series Date:</strong> 2016-11-04</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Coxiella burnetii</p>
<strong>Strain:</strong> Nine Mile phase II clone 4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in Robert Heinzen's lab @NIAID and ~50 ul cells were sent to us.</p>
<strong>Sample Preparation:</strong> Refer to Heinzen lab</p>
  dga2016-11-04-42_slicer17256.jpg: filament bundle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-42/rawdata/</p>15D_Pos4_atlas20013.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-42/rawdata/15D_Pos4_atlas20013.mrc"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20013_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-42/3dimage_108164/15D_Pos4_atlas20013_SIRT_1k.rec"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20013.ali,  577.3 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20013.tlt,  648.0 B  
        
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        15D_Pos4_atlas20013_fid.tlt,  648.0 B  
        
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DOI: 10.22002/jj7wf-p0835
title: Coxiella burnetii_wt_D15

description: Nine Mile phase II clone 4 (NMIIC4) strain. Wild-type cells day-15  culture.
description: <strong>Tilt Series Date:</strong> 2016-11-04</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Coxiella burnetii</p>
<strong>Strain:</strong> Nine Mile phase II clone 4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in Robert Heinzen's lab @NIAID and ~50 ul cells were sent to us.</p>
<strong>Sample Preparation:</strong> Refer to Heinzen lab</p>
  dga2016-11-04-83_slicer17267.jpg: multi membrane vesicles
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-83/rawdata/</p>15D_Pos4_atlas20054.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-83/rawdata/15D_Pos4_atlas20054.mrc"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20054_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-83/3dimage_108194/15D_Pos4_atlas20054_SIRT_1k.rec"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20054.ali,  527.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-83/file_24710/15D_Pos4_atlas20054.ali"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20054.tlt,  592.0 B  
        
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        15D_Pos4_atlas20054_fid.tlt,  592.0 B  
        
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DOI: 10.22002/w0ph2-e5h97
title: Coxiella burnetii_wt_D15

description: Nine Mile phase II clone 4 (NMIIC4) strain. Wild-type cells day-15  culture.
description: <strong>Tilt Series Date:</strong> 2016-11-04</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Coxiella burnetii</p>
<strong>Strain:</strong> Nine Mile phase II clone 4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in Robert Heinzen's lab @NIAID and ~50 ul cells were sent to us.</p>
<strong>Sample Preparation:</strong> Refer to Heinzen lab</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-75/rawdata/</p>15D_Pos4_atlas20046.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-75/rawdata/15D_Pos4_atlas20046.mrc"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20046_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-75/3dimage_108187/15D_Pos4_atlas20046_SIRT_1k.rec"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20046.ali,  577.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-75/file_24689/15D_Pos4_atlas20046.ali"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20046.tlt,  648.0 B  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-75/file_24690/15D_Pos4_atlas20046.tlt"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20046_fid.tlt,  648.0 B  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wqjs9-rgf16
title: Coxiella burnetii_wt_D15

description: Nine Mile phase II clone 4 (NMIIC4) strain. Wild-type cells day-15  culture.
description: <strong>Tilt Series Date:</strong> 2016-11-04</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Coxiella burnetii</p>
<strong>Strain:</strong> Nine Mile phase II clone 4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in Robert Heinzen's lab @NIAID and ~50 ul cells were sent to us.</p>
<strong>Sample Preparation:</strong> Refer to Heinzen lab</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-55/rawdata/</p>15D_Pos4_atlas20026.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-55/rawdata/15D_Pos4_atlas20026.mrc"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20026_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-55/3dimage_108175/15D_Pos4_atlas20026_SIRT_1k.rec"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20026.ali,  577.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-55/file_24653/15D_Pos4_atlas20026.ali"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20026.tlt,  648.0 B  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-55/file_24654/15D_Pos4_atlas20026.tlt"
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        15D_Pos4_atlas20026_fid.tlt,  648.0 B  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-55/file_24655/15D_Pos4_atlas20026_fid.tlt"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wf7vj-c4841
title: Coxiella burnetii_wt_D15

description: Nine Mile phase II clone 4 (NMIIC4) strain. Wild-type cells day-15  culture.
description: <strong>Tilt Series Date:</strong> 2016-11-04</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Coxiella burnetii</p>
<strong>Strain:</strong> Nine Mile phase II clone 4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in Robert Heinzen's lab @NIAID and ~50 ul cells were sent to us.</p>
<strong>Sample Preparation:</strong> Refer to Heinzen lab</p>
  dga2016-11-04-61_slicer17277.jpg: lamellation
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-61/rawdata/</p>15D_Pos4_atlas20032.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-61/rawdata/15D_Pos4_atlas20032.mrc"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20032_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-61/3dimage_108178/15D_Pos4_atlas20032_SIRT_1k.rec"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20032.ali,  577.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-61/file_24662/15D_Pos4_atlas20032.ali"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas20032.tlt,  648.0 B  
        
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        15D_Pos4_atlas20032_fid.tlt,  648.0 B  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xzhq3-pbm43
title: Coxiella burnetii_wt_D15

description: Nine Mile phase II clone 4 (NMIIC4) strain. Wild-type cells day-15  culture.
description: <strong>Tilt Series Date:</strong> 2016-11-04</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Coxiella burnetii</p>
<strong>Strain:</strong> Nine Mile phase II clone 4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in Robert Heinzen's lab @NIAID and ~50 ul cells were sent to us.</p>
<strong>Sample Preparation:</strong> Refer to Heinzen lab</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-7/rawdata/</p>15D_Pos4_atlas10007.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-7/rawdata/15D_Pos4_atlas10007.mrc"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas10007_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 118.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-7/3dimage_108183/15D_Pos4_atlas10007_SIRT_1k.rec"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas10007.ali,  64.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-7/file_24677/15D_Pos4_atlas10007.ali"
        > <i class="download icon"></i> Download </a></p>

        15D_Pos4_atlas10007.tlt,  648.0 B  
        
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        15D_Pos4_atlas10007_fid.tlt,  648.0 B  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/dnbjn-gcz46
title: Coxiella burnetii_wt_D15

description: Nine Mile phase II clone 4 (NMIIC4) strain. Wild-type cells day-15  culture.
description: <strong>Tilt Series Date:</strong> 2016-11-04</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Coxiella burnetii</p>
<strong>Strain:</strong> Nine Mile phase II clone 4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Robert Heinzen. Data collected and processed by Debnath Ghosal using Caltech tomography pipeline.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in Robert Heinzen's lab @NIAID and ~50 ul cells were sent to us.</p>
<strong>Sample Preparation:</strong> Refer to Heinzen lab</p>
  dga2016-11-04-87_slicer17268.jpg: lamellation
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2016-11-04-87/rawdata/</p>15D_Pos4_atlas20058.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
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        15D_Pos4_atlas20058_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
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        15D_Pos4_atlas20058.ali,  563.0 MB  
        
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        15D_Pos4_atlas20058.tlt,  632.0 B  
        
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        15D_Pos4_atlas20058_fid.tlt,  632.0 B  
        
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