cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26008/1912/bco-dmo.817214.1
title: Particulate chlorophyll data set from samples collected using ship’s surface underway system taken on board of the R/V Oceanus OC1701A, OC1611B, OC1603B, OC1602A, OC1601A in the Oregon Coast (47-43 N, 126-124 W) from 2016 to 2017

description: Particulate chlorophyll data set and added temperature and salinity from samples collected using ship’s surface underway system taken on board of the R/V Oceanus OC1701A, OC1611B, OC1603B, OC1602A, OC1601A in the Oregon Coast (47-43 N, 126-124 W) from 2016 to 2017.
DOI: 10.26008/1912/bco-dmo.817952.1
title: Particulate organic matter data set from samples collected using ship’s surface underway system taken on board of the R/V Oceanus OC1701A, OC1611B, OC1603B, OC1602A, OC1601A in the Oregon Coast (47-43 N, 126-124 W) from 2016 to 2017.

description: Particulate organic matter data set and added temperature and salinity from samples collected using ship’s surface underway system taken on board of the R/V Oceanus OC1701A, OC1611B, OC1603B, OC1602A, OC1601A in the Oregon Coast (47-43 N, 126-124 W) from 2016 to 2017.
DOI: 10.26008/1912/bco-dmo.713003.1
title: Results from Optimum Multiparameter Water Mass Analysis (OMPA) obtained using temperature, salinity, nutrient, and oxygen data from R/V Thomas G. Thompson cruise TN303 in the Eastern Tropical Pacific from October to December 2013

description: Results from Optimum Multiparameter Water Mass Analysis (OMPA) obtained using temperature, salinity, nutrient, and oxygen data from R/V Thomas G. Thompson cruise TN303 in the Eastern Tropical Pacific from October to December 2013.
DOI: 10.26008/1912/bco-dmo.815380.1
title: Carbon near edge X-ray absorption fine structure (NEXAFS) spectra from pelagic sediment from the North Atlantic gyre, South Pacific gyre, and Peru Basin from cruises KN223 (R/V Knorr), KNOX02RR (R/V Roger Revelle), and ODP leg 201 between 2002 and 2014

description: Carbon near edge X-ray absorption fine structure (NEXAFS) spectra from pelagic sediment from the North Atlantic gyre, South Pacific gyre, and Peru Basin from cruises KN223 (R/V Knorr), KNOX02RR (R/V Roger Revelle), and ODP leg 201 between 2002 and 2014.
DOI: 10.26008/1912/bco-dmo.816755.1
title: Temperature, salinity, water isotope, and inorganic nutrient profiles of sea ice core sections collected offshore near Utqiaġvik, Alaska, USA in May 2017 and 2018.

description: Sea ice cores were collected at 71.2944˚N, 156.7153˚W and 71.3729˚N, 156.5073˚W in May 2017 and at 71.4730˚N, 156.7294˚W in May 2018. Sea ice cores were drilled with a MARK II ice auger (Kovacs Enterprise). The cores were sectioned immediately after collection with a clean rust-proof, custom alloy bow saw in the field in 5 cm sections and each was collected in sterile Whirlpak® bags. Core sections were melted at room temperature before volumes were allocated for nutrient, water isotope, and bulk salinity measurements. Analytical measurements were made upon sample return to the University of Washington and to the University of Alaska Fairbanks. Associated temperature profile data were acquired from the nearby UAF Sea Ice Mass Balance site.
DOI: 10.26008/1912/bco-dmo.818707.1
title: Concentrations of soluble and dissolved iron (Fe) and iron isotope ratios from the U.S. GEOTRACES EPZT cruise (GP16, TN303) on R/V Thomas G. Thompson in the tropical Pacific during November & December 2013

description: Concentrations of soluble and dissolved iron (Fe) and iron isotope ratios from the U.S. GEOTRACES EPZT cruise (GP16, TN303) on R/V Thomas G. Thompson in the tropical Pacific during November & December 2013.
DOI: 10.26008/1912/bco-dmo.818765.1
title: Transcriptome data for bacteria collected eight hours after individual inoculation into a diatom Thalassiosira psuedonana culture

description: Transcriptome data for bacteria Ruegeria pomeroyi DSS-3, Stenotrophomonas sp. SKA14, Polaribacter dokdonensis MED152, and Dokdonia MED134 collected eight hours after individual inoculation into a diatom Thalassiosira psuedonana culture. The sequence data description for PRHNA448168 is at https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA448168.
DOI: 10.26008/1912/bco-dmo.817221.1
title: Brine samples from both sea ice and cryopeg near Utqiaġvik, Alaska, USA from 2017-05-08 to 2018-05-10

description: Brine samples were collected from both sea ice and cryopeg near Utqiaġvik, Alaska, USA. Snow and ice thickness along with sackhole core depth information are available for sea ice samples. Bacterial and viral abundances along with temperature, pH, salinity, inorganic nutrients, organic nutrients, EPS, and water isotopes were measured for select samples.
DOI: 10.26008/1912/bco-dmo.817454.1
title: Unprocessed holographic data of cryopeg fluids viewed at sub-micron resolution from Alaskan Arctic Coast Permafrost Tunnel and landfast sea ice from May 2017

description: Unprocessed (raw) holographic data of cryopeg and sea ice brines viewed using a digital holographic microscope at sub-micron resolution. Samples collected from Alaskan Arctic Coast Permafrost Tunnel and landfast sea ice near Utqiagvik in May 2017.
DOI: 10.26008/1912/bco-dmo.741114.1
title: Physiological parameters derived from dissection of mangrove crabs, A. pisonii, from three habitats along Florida's east coast in 2015 and 2016

description: This dataset includes multiple physiological parameters derived from dissection of mangrove tree crabs, A. pisonii, from three habitats: mangrove, saltmarsh and mangrove.
DOI: 10.26008/1912/bco-dmo.741158.1
title: Energy content of mangrove crab, A. pisonii, eggs from three habitats along the Florida eastern coast, 2016

description: This dataset includes calculations of the energy content of eggs of mangrove tree crabs, A. pisonii, from three habitats: mangrove, saltmarsh and mangrove collected along the eastern Florida coast in 2016.
DOI: 10.26008/1912/bco-dmo.741192.1
title: Lipid and glycogen content of A. pisonii eggs from three habitats along the Florida eastern coast, 2016

description: This dataset includes calculations of the lipid and glycogen content of eggs of mangrove tree crabs, A. pisonii, from three habitats: mangrove, saltmarsh and mangrove collected along the eastern Florida coast in 2016.
DOI: 10.26008/1912/bco-dmo.741078.1
title: Clutch size of the mangrove tree crab A. pisonii from three habitats: mangrove, saltmarsh and mangrove

description: This dataset includes clutch size of the mangrove tree crab A. pisonii from three habitats: mangrove, saltmarsh and mangrove.
DOI: 10.26008/1912/bco-dmo.741219.1
title: Fatty acid concentration extracted from A. pisonii eggs from three habitats along the Florida eastern coast, 2016

description: This dataset includes concentrations of fatty acids from eggs of mangrove tree crabs, A. pisonii, from three habitats: mangrove, saltmarsh and mangrove collected along the eastern Florida coast in 2016.
DOI: 10.26008/1912/bco-dmo.749412.1
title: Images of particles collected in sediment traps for quantitative analysis from multiple platforms from 2016-2017

description: Images of particles collected in sediment traps for quantitative analysis from multiple platforms from 2016-2017
DOI: 10.26008/1912/bco-dmo.782736.1
title: Organic carbon, d13C, and total nitrogen content of pelagic sediment from the North Atlantic gyre, South Pacific gyre, and Peru Basin from cruises KN223, KNOX02RR, and ODP leg 201 between 2002 and 2013

description: Organic carbon, d13C, and total nitrogen content of pelagic sediment from the North Atlantic gyre, South Pacific gyre, and Peru Basin from cruises KN223 (R/V Knorr), KNOX02RR (R/V Roger Revelle), and ODP leg 201 between 2002 and 2013.  Sediment samples were taken with gravity corers, multi corers, piston and advanced piston corers (APC).
DOI: 10.26008/1912/bco-dmo.782742.1
title: Protein assay of proteinaceous material in pelagic sediment from the North Atlantic gyre, South Pacific gyre, and Peru Basin from cruises KN223, KNOX02RR, and ODP leg 201 between 2002 and 2013

description: Protein assay of proteinaceous material in pelagic sediment from the North Atlantic gyre, South Pacific gyre, and Peru Basin from cruises KN223 (R/V Knorr), KNOX02RR (R/V Roger Revelle), and ODP leg 201 between 2002 and 2013.  Sediment samples were taken with gravity corers, multi corers, piston and advanced piston corers (APC).
DOI: 10.15468/dl.wfxje4
title: Occurrence Download

description: A dataset listing the 3 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Annona muricata"
 ]
}

 The dataset's 3 records were derived from 507 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021501-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26008/1912/bco-dmo.808280.1
title: Organic polymer formation and domoic acid adsorption from experiments conducted using water samples collected in northern Gulf of Mexico in 2018 and 2019

description: Organic polymer formation and domoic acid adsorption. Results from lab experiments designed to investigate organic polymer formation and domoic acid adsorption.  Water samples were collected in the northern Gulf of Mexico in 2018 and 2019.
DOI: 10.26008/1912/bco-dmo.808402.1
title: Domoic acid assimilation in copepods from experiments conducted using water samples collected in northern Gulf of Mexico in 2019

description: Domoic acid assimilation in copepods by consuming organic polymers containing domoic acid.  Results from lab experiments designed to investigate the role of organic polymers in trophic transfer of domoic acid, using Acartia tonsa as a model organism.  Water samples were collected in the northern Gulf of Mexico in 2019.
DOI: 10.26008/1912/bco-dmo.808413.1
title: Domoic acid assimilation in copepods by consuming organic polymers and Pseudo-nitzschia from experiments conducted using water samples collected in northern Gulf of Mexico in 2017 and 2018.

description: Domoic acid assimilation in copepods by consuming organic polymers and Pseudo-nitzschia. Results from experiments designed to investigate the contribution of organic polymers and Pseudo-nitzschia to domoic acid trophic transfer.  Water samples were collected in the northern Gulf of Mexico in 2017 and 2018.
DOI: 10.26008/1912/bco-dmo.812936.1
title: Supplementary Table 4A: Metatranscriptome data summary for cellular activities presented and statistics on sequencing and removal of potential contaminant sequences, FPKM values

description: Supplementary Table 4A: Metatranscriptome data summary for cellular activities presented and statistics on sequencing and removal of potential contaminant sequences: FPKM values. Samples  taken on board of the R/V JOIDES Resolution between November 30, 2015 and January 30, 2016.
DOI: 10.26008/1912/bco-dmo.812997.1
title: Supplementary Table 4B: Annotations for contigs within transcriptome libraries for the eleven samples that were manually curated for selected metabolic processes

description: Supplementary Table 4B: Metatranscriptome data summary for cellular activities presented and statistics on sequencing and removal of potential contaminant sequences: Annotations for contigs within transcriptome libraries for the eleven samples that were manually curated for selected metabolic processes. Samples  taken on board of the R/V JOIDES Resolution between November 30, 2015 and January 30, 2016.
DOI: 10.26008/1912/bco-dmo.813173.1
title: Supplementary Table 4C: Statistics of reads retained through bioinformatic processing of iTAG data for the 11 samples and control samples and metatranscriptome data.

description: Supplementary Table 4C: Metatranscriptome data summary for cellular activities presented and statistics on sequencing and removal of potential contaminant sequences: Statistics of reads retained through bioinformatic processing of iTAG data for the 11 samples and control samples and metatranscriptome data. Samples  taken on board of the R/V JOIDES Resolution between November 30, 2015 and January 30, 2016
DOI: 10.26008/1912/bco-dmo.643213.7
title: Water-column total Th-234 from R/V Thomas G. Thompson cruise TN303 in the Eastern Tropical Pacific in 2013 (U.S. GEOTRACES EPZT project)

description: Water-column total Th-234 with 4 L method from the 2013 U.S. GEOTRACES EPZT cruise.

U-238 from U-salinity relationship was also determined but not reported in this dataset. These data can be made available upon request from the PI and/or dataset contact. Methods are described below.
DOI: 10.26008/1912/bco-dmo.643316.3
title: Particulate Th-234 from in-situ pumps, including large size fraction (&gt; 51 um) and small size fraction (1-51 um), from R/V Thomas G. Thompson cruise TN303 in the Eastern Tropical Pacific in 2013 (U.S. GEOTRACES EPZT project)

description: Particulate Thorium-234 from in-situ pumps, including large size fraction (&gt; 51 µm) and small size fraction (1-51 µm), during the 2013 U.S. GEOTRACES cruise.
DOI: 10.26008/1912/bco-dmo.812240.1
title: Carbon isotopic compositions and fractionation factors of M. jannaschii in high and low hydrogen (H2) environments

description: Carbon isotopic compositions and fractionation factors of amino acids and squalenoid lipids in  Methanocaldococcus jannaschii in high and low hydrogen (H2) environments.
DOI: 10.26008/1912/bco-dmo.814267.1
title: Sponge density and morphology and percent cover of sponges and associated community at Virgin Islands Territorial Coral Reef Monitoring Program site, pre- and post-hurricane, 2015-2017

description: Sponge density and morphology and percent cover of sponges and associated benthic community determined from videos of three transects at Virgin Islands Territorial Coral Reef Monitoring Program site, pre- and post-hurricane, 2015-2017.
DOI: 10.26008/1912/bco-dmo.814490.1
title: Sponge volume at Virgin Islands Territorial Coral Reef Monitoring Program’s (TCRMP) permanent monitoring sites, 2015-2017

description: Sponge volume at Virgin Islands Territorial Coral Reef Monitoring Program’s (TCRMP) permanent monitoring sites, 2015-2017.
DOI: 10.26008/1912/bco-dmo.810902.1
title: Supplementary Table 1: Results of CHNS analyses in rock samples at different depths and sample images.

description: Results of CHNS analyses in rock samples at different depths and sample images taken on board of the R/V JOIDES Resolution between November 30, 2015 and January 30, 2016
DOI: 10.26008/1912/bco-dmo.811268.1
title: Supplementary Table 3A: Concentration of archaeal and bacterial lipid biomarkers, ratio of core vs intact polar lipids and average chain length of bacterial dietherglycerol lipids.

description: Overview of archaeal and bacterial lipid biomarkers and cell counts. Concentration of archaeal and bacterial lipid biomarkers, ratio of core vs intact polar lipids and average chain length of bacterial dietherglycerol lipids. Samples  taken on board of the R/V JOIDES Resolution between November 30, 2015 and January 30, 2016
DOI: 10.26008/1912/bco-dmo.810923.1
title: Supplementary Table 2: Drill fluid contamination testiFMC in drilling. GC mass spectrometry measurements of concentrations of the tracers PFMD and Png fluid and sample materials

description: Supplementary Table 2: Drill fluid contamination testing. GC mass spectrometry measurements of concentrations of the tracers PFMD and PFMC in drilling fluid and sample materials.
DOI: 10.26008/1912/bco-dmo.811483.1
title: Supplementary Table 3B: Replicate cell counts for the 11 samples and alkaline phosphatase activity measurements available for any of the 11 samples

description: Supplementary Table 3B: Overview of archaeal and bacterial lipid biomarkers and cell counts. Replicate cell counts for the 11 samples and alkaline phosphatase activity measurements available for any of the 11 samples. Samples were taken on board of the JOIDES Resolution  between November 30, 2015 and January 30, 2016 in the SW Indian Ridge.
DOI: 10.26008/1912/bco-dmo.813210.1
title: Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau.

description: Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau.
DOI: 10.26008/1912/bco-dmo.813187.1
title: Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau.

description: Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau.
DOI: 10.26008/1912/bco-dmo.817298.1
title: Coral gene expression Sequence Read Archive (SRA) accession numbers and information for samples collected at the Flower Garden Banks National Marine Sanctuary in the Gulf of Mexico in September and October of 2017 to capture effects of Hurricane Harvey

description: To capture the immediate effects of storm-driven freshwater runoff on coral and symbiont physiology, we leveraged the heavy rainfall associated with Hurricane Harvey in late August 2017 by sampling FGB coral gene expression at two time points: September 2017, when surface water salinity was reduced (∼34 ppt); and 1 month later when salinity had returned to typical levels (∼36 ppt in October 2017). 

This dataset includes Sequence Read Archive (SRA) and BioSample accessions under BioProject PRJNA552981 at The National Center for Biotechnology Information.  It also contains sample information and species names for samples collected the east and west banks of the Flower Garden Banks National Marine Sanctuary (FGBNMS) at 80ft.

These data were published in Wright et al. (2019).
DOI: 10.26008/1912/bco-dmo.722472.2
title: Dissolved and labile cobalt from the USCGC Healy HLY1502 in the Canada and Makarov Basins of the Arctic Ocean from August to October 2015 (U.S. GEOTRACES Arctic project)

description: Dissolved and labile cobalt from the USCGC Healy HLY1502 in the Canada and Makarov Basins of the Arctic Ocean from August to October 2015 (U.S. GEOTRACES Arctic project).
DOI: 10.26008/1912/bco-dmo.805206.1
title: Total molybdate reactive and unreactive phosphorus concentrations from sediment extracts from sediment samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998

description: Total molybdate reactive and unreactive phosphorus concentrations from sediment extracts from sediment samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998.
DOI: 10.26008/1912/bco-dmo.805216.1
title: Total phosphorus and metal concentrations from sediment extracts from samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998

description: Total phosphorus and metal concentrations from sediment extracts from samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998.
DOI: 10.26008/1912/bco-dmo.794698.1
title: Solution 31P NMR spectra files from sediment samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998

description: Solution 31P nuclear magnetic resonance (NMR) spectra files from sediment samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998.  The spectra are contained in free induction decay (FID) files.
DOI: 10.26008/1912/bco-dmo.798995.1
title: Molybdate reactive phosphorus concentrations in NMR pretreatment extracts from sediment samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998

description: Molybdate reactive phosphorus concentrations in nuclear magnetic resonance (NMR) pretreatment extracts from sediment samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998.
DOI: 10.26008/1912/bco-dmo.805226.1
title: Total phosphorus concentrations in NMR sediment pretreatment extracts from samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998

description: Total phosphorus concentrations in nuclear magnetic resonance (NMR) sediment pretreatment extracts from samples collected during cruises in the Arctic Ocean, California Margin, and Equatorial Pacific from 1992-1998.
DOI: 10.26008/1912/bco-dmo.788911.1
title: Microbial cell abundance,carbon fixation rates, and nitrate concentrations during shipboard incubations of vent fluids at the diffuse-flow vent Crab Spa, East Pacific Rise on RV/Atlantis cruise AT37-12, May 2017

description: Microbial cell abundance, carbon fixation rates, and nitrate concentrations during shipboard incubations of vent fluids at the diffuse-flow vent Crab Spa, East Pacific Rise in the Eastern Tropical North Pacific (ETNP) on RV/Atlantis cruise AT37-12, May 2017.
DOI: 10.26008/1912/bco-dmo.817259.1
title: Concentrations of dissolved micronutrient trace metals (Fe, Zn, Ni, Cu, Cd, Pb, Mn) in seawater, sea ice, and melt ponds collected during the US GEOTRACES Arctic cruise (HLY1502; GN01) on USCGC Healy from August to October 2015

description: Concentrations of dissolved micronutrient trace metals (Fe, Zn, Ni, Cu, Cd, Pb, Mn) in seawater, sea ice, and melt ponds collected on the US GEOTRACES Arctic cruise (HLY1502, GN01) from August to October 2015.
DOI: 10.26008/1912/bco-dmo.816576.1
title: Total phosphorus concentrations in NMR sediment pretreatment extracts from samples collected during R/V JOIDES Resolution cruise JRES-336 (IODP336, North Pond) to the western flank of the mid-Atlantic Ridge in November of 2011

description: Total phosphorus concentrations in nuclear magnetic resonance (NMR) sediment pretreatment extracts from samples collected during R/V JOIDES Resolution cruise JRES-336 (IODP336, North Pond) to the western flank of the mid-Atlantic Ridge in November of 2011. Samples were analyzed in 2016.
DOI: 10.26008/1912/bco-dmo.816623.1
title: Solution 31P NMR spectra files from sediment samples collected during R/V JOIDES Resolution cruise JRES-336 (IODP336, North Pond) to the western flank of the mid-Atlantic Ridge in November of 2011

description: Solution 31P nuclear magnetic resonance (NMR) spectra files from sediment samples collected during R/V JOIDES Resolution cruise JRES-336 (IODP336, North Pond) to the western flank of the mid-Atlantic Ridge in November of 2011. Samples were analyzed in 2016.
DOI: 10.26008/1912/bco-dmo.739973.1
title: Alkaline phosphatase activities for in situ and incubation samples from RV/Atlantic Explorer cruise AE1812 cruise transect from Bermuda to Rhode Island in May 2018.

description: This dataset reports alkaline phosphatase activities (APA) for 3 incubation runs and 33 in situ samples collected on RV/Atlantic Explorer cruise AE1812 in May 2018. The samples were collected between Bermuda and Rhode Island.
DOI: 10.26008/1912/bco-dmo.812523.1
title: Current flow and oxygen concentrations recorded by the 2OEC-instrument in the Florida Keys from August 2013 and April 2014

description: Velocity and external sensor data recorded by the Nortek Vector ADV logger in the Florida Keys from August 2013 and April 2014.
DOI: 10.26008/1912/bco-dmo.816527.1
title: Molybdate reactive phosphorus concentrations in NMR pretreatment extracts from sediment samples collected during R/V JOIDES Resolution cruise JRES-336 (IODP336, North Pond) to the western flank of the mid-Atlantic Ridge in November of 2011

description: Molybdate reactive phosphorus concentrations in nuclear magnetic resonance (NMR) pretreatment extracts from sediment samples collected during R/V JOIDES Resolution cruise JRES-336 (IODP336, North Pond) to the western flank of the mid-Atlantic Ridge in November of 2011.  Samples were analyzed in 2016.