cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.15064389.v1
title: Additional file 4 of Identification of ferroptosis genes in immune infiltration and prognosis in thyroid papillary carcinoma using network analysis

description: Additional file 4: Table S3. The full list of significant differentially expressed genes.
DOI: 10.6084/m9.figshare.15064395
title: Additional file 5 of Identification of ferroptosis genes in immune infiltration and prognosis in thyroid papillary carcinoma using network analysis

description: Additional file 5: Table S4. The statistical results of Unicox and Multicox analysis.
DOI: 10.6084/m9.figshare.15064395.v1
title: Additional file 5 of Identification of ferroptosis genes in immune infiltration and prognosis in thyroid papillary carcinoma using network analysis

description: Additional file 5: Table S4. The statistical results of Unicox and Multicox analysis.
DOI: 10.6084/m9.figshare.15064438
title: Additional file 10 of Functional enrichment of gut microbiome by early supplementation of Bacillus based probiotic in cage free hens: a field study

description: Additional file 10. Details of metabolic pathways included in the functional prediction analysis. (XLS 3419 kb)
DOI: 10.6084/m9.figshare.15064438.v1
title: Additional file 10 of Functional enrichment of gut microbiome by early supplementation of Bacillus based probiotic in cage free hens: a field study

description: Additional file 10. Details of metabolic pathways included in the functional prediction analysis. (XLS 3419 kb)
DOI: 10.6084/m9.figshare.15064471.v1
title: Additional file 2 of Functional enrichment of gut microbiome by early supplementation of Bacillus based probiotic in cage free hens: a field study

description: Additional file 2. Quality of reads generated in the study.
DOI: 10.6084/m9.figshare.15064471
title: Additional file 2 of Functional enrichment of gut microbiome by early supplementation of Bacillus based probiotic in cage free hens: a field study

description: Additional file 2. Quality of reads generated in the study.
DOI: 10.6084/m9.figshare.15064477
title: Additional file 4 of Functional enrichment of gut microbiome by early supplementation of Bacillus based probiotic in cage free hens: a field study

description: Additional file 4. OTU Table containing details of taxa of faecal samples collected from the probiotic supplemented and control groups at different sampling time-points. (SUMMARY 1369 kb)
DOI: 10.6084/m9.figshare.15064480.v1
title: Additional file 5 of Functional enrichment of gut microbiome by early supplementation of Bacillus based probiotic in cage free hens: a field study

description: Additional file 5. Metadata file required for the OTU Table for further analysis and data visualisation. (CSV 52 kb)
DOI: 10.6084/m9.figshare.15064477.v1
title: Additional file 4 of Functional enrichment of gut microbiome by early supplementation of Bacillus based probiotic in cage free hens: a field study

description: Additional file 4. OTU Table containing details of taxa of faecal samples collected from the probiotic supplemented and control groups at different sampling time-points. (SUMMARY 1369 kb)
DOI: 10.6084/m9.figshare.15064480
title: Additional file 5 of Functional enrichment of gut microbiome by early supplementation of Bacillus based probiotic in cage free hens: a field study

description: Additional file 5. Metadata file required for the OTU Table for further analysis and data visualisation. (CSV 52 kb)
DOI: 10.6084/m9.figshare.15064596
title: Additional file 1 of Review of control strategies for lower-limb exoskeletons to assist gait

description: Additional file 1. The full data base of the reviewed records and their classification according to the proposed framework.
DOI: 10.6084/m9.figshare.15064596.v1
title: Additional file 1 of Review of control strategies for lower-limb exoskeletons to assist gait

description: Additional file 1. The full data base of the reviewed records and their classification according to the proposed framework.
DOI: 10.5281/zenodo.5140084
title: Preservation and destruction of Holocene marine terraces: the effects of episodic versus gradual relative sea level change

description: Dataset contains RPM source codes, a sample RPM simulation code, and data of the results presented "Preservation and destruction of Holocene marine terraces: the effects of episodic versus gradual relative sea level change"
DOI: 10.5281/zenodo.4776965
title: Preservation and destruction of Holocene marine terraces: the effects of episodic versus gradual relative sea level change

description: Dataset contains RPM source codes, a sample RPM simulation code, and data of the results presented "Preservation and destruction of Holocene marine terraces: the effects of episodic versus gradual relative sea level change"
DOI: 10.6084/m9.figshare.15065019
title: Experimental data description

description: 每个文件为 rinex 格式，包含实时动态定位结果。文件名的第一个数字表示观测数据时间跨度的日期。例如，数字 1 表示第一天，数字 2 表示第二天。文件名的第二个数字表示监控点的编号，例如数字1表示P1监控点。“CMP”表示北斗定位结果。“GPS”表示 GPS 定位结果。“GPS-CMP”表示 GPS/BDS 定位结果。
DOI: 10.6084/m9.figshare.15064993.v1
title: Additional file 1 of Heme oxygenase-1 and neopterin plasma/serum levels and their role in diagnosing active and latent TB among HIV/TB co-infected patients: a cross sectional study

description: Additional file 1: Supplementary material. Standards were used to draw a standard reference curve from which the sample ODs were converted into HO-1 and neopterin concentrations in ng/ml.
DOI: 10.6084/m9.figshare.15064797.v1
title: Additional file 2 of LncGSEA: a versatile tool to infer lncRNA associated pathways from large-scale cancer transcriptome sequencing data

description: Additional file 2: Supplementary Table S5. Top 5 enriched hallmark pathways of 7 lncRNAs predicted by lncGSEA and ncFANs v2.0. Supplementary Table S6. Top 5 enriched GO:BP pathways of 4 lncRNAs predicted by lncGSEA and AnnoLnc2.
DOI: 10.6084/m9.figshare.15064993
title: Additional file 1 of Heme oxygenase-1 and neopterin plasma/serum levels and their role in diagnosing active and latent TB among HIV/TB co-infected patients: a cross sectional study

description: Additional file 1: Supplementary material. Standards were used to draw a standard reference curve from which the sample ODs were converted into HO-1 and neopterin concentrations in ng/ml.
DOI: 10.6084/m9.figshare.15064797
title: Additional file 2 of LncGSEA: a versatile tool to infer lncRNA associated pathways from large-scale cancer transcriptome sequencing data

description: Additional file 2: Supplementary Table S5. Top 5 enriched hallmark pathways of 7 lncRNAs predicted by lncGSEA and ncFANs v2.0. Supplementary Table S6. Top 5 enriched GO:BP pathways of 4 lncRNAs predicted by lncGSEA and AnnoLnc2.
DOI: 10.5281/zenodo.5140605
title: Horizontal transfer and subsequent explosive expansion of a DNA transposon in sea kraits (Laticauda)

description: <strong>Abstract</strong> Transposable elements (TEs) are self replicating genetic sequences and are often described as important “drivers of evolution”. This driving force is because TEs promote genomic novelty by enabling rearrangement, and through exaptation as coding and regulatory elements. However, most TE insertions will be neutral or harmful, therefore host genomes have evolved machinery to supress TE expansion. Through horizontal transposon transfer (HTT) TEs can colonise new genomes, and since new hosts may not be able to shut them down, these TEs may proliferate rapidly. Here we describe HTT of the <em>Harbinger-Snek</em> DNA transposon into sea kraits (<em>Laticauda</em>), and its subsequent explosive expansion within <em>Laticauda</em> genomes. This HTT occurred following the divergence of <em>Laticauda</em> from terrestrial Australian elapids ~15-25 Mya. This has resulted in numerous insertions into introns and regulatory regions, with some insertions into exons which appear to have altered UTRs or added sequence to coding exons. <em>Harbinger-Snek</em> has rapidly expanded to make up 8-12% of <em>Laticauda</em> spp. genomes; this is the fastest known expansion of TEs in amniotes following HTT. Genomic changes caused by this rapid expansion may have contributed to adaptation to the amphibious-marine habitat. <strong>Dataset</strong> The deposited dataset contains scripts used in analysis, GFFs of the <em>Laticauda </em>genome gene annotations produced using Liftoff, repeat sequences of all <em>Harbinger-Snek variants and Harbinger-Snek</em>-like TEs, repeat library used in RepeatMasker repeat annotation, repeat annotation of <em>Laticauda, Notechis</em> and <em>Pseudonaja</em> genomes, screenshots of IGV showing RNASeq reads mapped to gene exons and UTRs containing <em>Harbinger-Snek</em> insertions, and all phylogenetic trees and the sequence data used in generating them.
DOI: 10.5281/zenodo.5140604
title: Horizontal transfer and subsequent explosive expansion of a DNA transposon in sea kraits (Laticauda)

description: <strong>Abstract</strong> Transposable elements (TEs) are self replicating genetic sequences and are often described as important “drivers of evolution”. This driving force is because TEs promote genomic novelty by enabling rearrangement, and through exaptation as coding and regulatory elements. However, most TE insertions will be neutral or harmful, therefore host genomes have evolved machinery to supress TE expansion. Through horizontal transposon transfer (HTT) TEs can colonise new genomes, and since new hosts may not be able to shut them down, these TEs may proliferate rapidly. Here we describe HTT of the <em>Harbinger-Snek</em> DNA transposon into sea kraits (<em>Laticauda</em>), and its subsequent explosive expansion within <em>Laticauda</em> genomes. This HTT occurred following the divergence of <em>Laticauda</em> from terrestrial Australian elapids ~15-25 Mya. This has resulted in numerous insertions into introns and regulatory regions, with some insertions into exons which appear to have altered UTRs or added sequence to coding exons. <em>Harbinger-Snek</em> has rapidly expanded to make up 8-12% of <em>Laticauda</em> spp. genomes; this is the fastest known expansion of TEs in amniotes following HTT. Genomic changes caused by this rapid expansion may have contributed to adaptation to the amphibious-marine habitat. <strong>Dataset</strong> The deposited dataset contains scripts used in analysis, GFFs of the <em>Laticauda </em>genome gene annotations produced using Liftoff, repeat sequences of all <em>Harbinger-Snek variants and Harbinger-Snek</em>-like TEs, repeat library used in RepeatMasker repeat annotation, repeat annotation of <em>Laticauda, Notechis</em> and <em>Pseudonaja</em> genomes, screenshots of IGV showing RNASeq reads mapped to gene exons and UTRs containing <em>Harbinger-Snek</em> insertions, and all phylogenetic trees and the sequence data used in generating them.
DOI: 10.25919/t0wy-nd89
title: Database of chemical properties of Australian biomass and waste

description: This project sought to develop a database of fuel and energy characteristics for a range of Australian biomass and wastes to support their use in a range of thermochemical technologies. The database includes biomass sourced from agriculture (wheat straw, cotton trash, sugar cane trash, chicken manure, etc), forestry (mostly woody wastes from different forestry operations including some irrigated by effluent), industrial processing (timber residues, saw dust from timber mills, bagasse from sugar industry, rice hull from rice industry, paper sludge from paper industry, etc) and urban waste (municipal solid waste, green waste and biosolids and sewage from waste water treatment facilities). The database contains relatively simple-to-use information such as proximate analysis, ultimate analysis, calorific value as well as chemical composition of mineral matter to enable project proponents to draw conclusions as to likely plant capacity and annual output. It will be updated and expanded over time as more data are available.
DOI: 10.5281/zenodo.5140696
title: Physical activity interventions and nutrition-based interventions for children and adolescents with type 1 diabetes mellitus

description: 1. Baseline characteristics of participants 2. Description of studies 3. Data extraction_Excel
DOI: 10.5281/zenodo.4738374
title: Physical activity interventions and nutrition-based interventions for children and adolescents with type 1 diabetes mellitus

description: 1. Baseline characteristics of participants 2. Description of studies 3. Data extraction_Excel
DOI: 10.6084/m9.figshare.15065127
title: Raw data of Experiment 4 in modal pluralism of causation.xlsx

description: <i>design and materials</i> The three types of questions used separately in each prior experiment were integrated together in Experiment 4. Every participant was asked to complete three questions in one experiment. This design aimed to provide not only multiple-perspective evidence but also the chance to examine the consistency among the three types of within-group responses. Three domains were adopted based on the tendencies yielded from the previous experiments: the physical (the strongest deterministic) causation, the psychological (the most robust probabilistic) causation, and the physiological causation between two extremes. Our design was inspired by Strickland et al.’s (2017) Experiment 5, in which they simply frame a given ambiguous event in psychological versus physical terms. <br>
DOI: 10.6084/m9.figshare.15065127.v1
title: Raw data of Experiment 4 in modal pluralism of causation.xlsx

description: <i>design and materials</i> The three types of questions used separately in each prior experiment were integrated together in Experiment 4. Every participant was asked to complete three questions in one experiment. This design aimed to provide not only multiple-perspective evidence but also the chance to examine the consistency among the three types of within-group responses. Three domains were adopted based on the tendencies yielded from the previous experiments: the physical (the strongest deterministic) causation, the psychological (the most robust probabilistic) causation, and the physiological causation between two extremes. Our design was inspired by Strickland et al.’s (2017) Experiment 5, in which they simply frame a given ambiguous event in psychological versus physical terms. <br>
DOI: 10.6084/m9.figshare.14259779.v2
title: Growth hormone for endometrial receptivity in women undergoing in vitro fertilization

description: Supplemental Table 1. Search strategy for PubMed Supplemental Table 2. Meta-regression analyses of primary outcomes and moderator variables Supplemental Figure 1. Trial sequential analysis of (A) clinical pregnancy rate, (B) endometrial thickness, and (C) live birth rate .
DOI: 10.6084/m9.figshare.14259779
title: Growth hormone for endometrial receptivity in women undergoing in vitro fertilization

description: Supplemental Table 1. Search strategy for PubMed Supplemental Table 2. Meta-regression analyses of primary outcomes and moderator variables Supplemental Figure 1. Trial sequential analysis of (A) clinical pregnancy rate, (B) endometrial thickness, and (C) live birth rate .
DOI: 10.6084/m9.figshare.14259779.v1
title: Growth hormone for endometrial receptivity in women undergoing in vitro fertilization

description: Supplemental Table 1. Search strategy for PubMed. Supplemental Figure 1. Assessments about risk-of-bias of included studies.
DOI: 10.25919/gbvy-yz23
title: AgScan3D Viticulture Datasets

description: Viticulture datasets collected using AgScan3D in 2019. AgScan3D is the mobile 3D spinning lidar system mounted on a farm vehicle. We captured the datasets at commercial vineyards in two winegrape growing regions of South Australia: McLaren Vale and Coonawarra, during the period Oct to Dec 2019.
DOI: 10.5281/zenodo.5140638
title: SolarSMART Social Energy Atlas 2020 Georgia Interviews

description: The SolarSMART Social Energy Atlas 2020 Georgia Interview dataset provides results from interviews with 2018 residents of the State of Georgia above the age of 18 on their perceptions of photovoltaic solar energy. The interview includes the following: demographic information for each respondent, their location in the state (by ZIP Code); the type of house they reside within; whether they have or have not adopted solar energy (and if so, how did they adopt solar energy); audio recordings of a semi-structured interview between the informants and representatives from the project who were often agents from the UGA Cooperative Extension Service; and the outputs from that interview that also included draw-a-map responses to where they perceived people adopted solar technologies in the United States and the State of Georgia. Respondents were from 25 of the 159 counties of the State of Georgia, with representation of both urban and rural residents. In total, the dataset includes 25 variables currently coded (with over 170 identified. Transcriptions of the interviews are also provided in the dataset alongside graphics for each informant that can be used in presentations and other derivatives involving this dataset in the future. This dataset inspired the SolarSMART 2020 Georgia Survey dataset (DOI: 10.5281/zenodo.4540819).
description: This work was funded by the U.S. Department of Energy Solar Energy Technologies Office as part of the Solar Energy Evolution and Diffusion Studies II Program - Award #DE-EE0007664.
DOI: 10.5281/zenodo.5140637
title: SolarSMART Social Energy Atlas 2020 Georgia Interviews

description: The SolarSMART Social Energy Atlas 2020 Georgia Interview dataset provides results from interviews with 2018 residents of the State of Georgia above the age of 18 on their perceptions of photovoltaic solar energy. The interview includes the following: demographic information for each respondent, their location in the state (by ZIP Code); the type of house they reside within; whether they have or have not adopted solar energy (and if so, how did they adopt solar energy); audio recordings of a semi-structured interview between the informants and representatives from the project who were often agents from the UGA Cooperative Extension Service; and the outputs from that interview that also included draw-a-map responses to where they perceived people adopted solar technologies in the United States and the State of Georgia. Respondents were from 25 of the 159 counties of the State of Georgia, with representation of both urban and rural residents. In total, the dataset includes 25 variables currently coded (with over 170 identified. Transcriptions of the interviews are also provided in the dataset alongside graphics for each informant that can be used in presentations and other derivatives involving this dataset in the future. This dataset inspired the SolarSMART 2020 Georgia Survey dataset (DOI: 10.5281/zenodo.4540819).
description: This work was funded by the U.S. Department of Energy Solar Energy Technologies Office as part of the Solar Energy Evolution and Diffusion Studies II Program - Award #DE-EE0007664.
DOI: 10.48370/ofd/pj9jdl/4sjrha
title: HMW_Ammophila_arenaria_(L.)_Link_H_5248.jpg

description: :unav
DOI: 10.48370/ofd/pj9jdl
title: Piaskownica zwyczajna (Ammophila arenaria (L.) Link), 5248

description: Herbarium
DOI: 10.48370/ofd/hfi3tx/axbjsw
title: HMW_Ammophila_arenaria_(L.)_Link_H_3482.jpg

description: :unav
DOI: 10.48370/ofd/hfi3tx
title: Piaskownica zwyczajna (Ammophila arenaria (L.) Link), 3482

description: Herbarium
DOI: 10.48370/ofd/yeqsqs/yo3klt
title: HMW_Arenaria_graminifolia_Schrad._H_9296.jpg

description: :unav
DOI: 10.48370/ofd/yeqsqs
title: Piaskowiec trawiasty (Arenaria graminifolia Schrad.), 9296

description: Herbarium
DOI: 10.48370/ofd/6v90ms/pxqtee
title: HMW_Arenaria_graminifolia_Schrad._H_9296.jpg

description: :unav
DOI: 10.48370/ofd/6v90ms
title: Piaskowiec trawiasty (Arenaria graminifolia Schrad.), 9296

description: Herbarium
DOI: 10.48370/ofd/gkstue/gthcr1
title: HMW_Arenaria_graminifolia_Schrad._H_4273.jpg

description: :unav
DOI: 10.48370/ofd/gkstue
title: Piaskowiec trawiasty (Arenaria graminifolia Schrad.), 4273

description: Herbarium
DOI: 10.48370/ofd/uaddvh/3wxmjs
title: HMW_Arenaria_graminifolia_Schrad._H_4260.jpg

description: :unav
DOI: 10.48370/ofd/uaddvh
title: Piaskowiec trawiasty (Arenaria graminifolia Schrad.), 4260

description: Herbarium
DOI: 10.48370/ofd/dwn2c3/i5synz
title: HMW_Arenaria_graminifolia_Schrad._H_4252.jpg

description: :unav
DOI: 10.48370/ofd/dwn2c3
title: Piaskowiec trawiasty (Arenaria graminifolia Schrad.), 4252

description: Herbarium
DOI: 10.48370/ofd/v3yt8s/rmr5jv
title: HMW_Arenaria_serpyllifolia_L._H_5043.jpg

description: :unav
DOI: 10.48370/ofd/v3yt8s
title: Piaskowiec macierzankowy (Arenaria serpyllifolia L.), 5043

description: Herbarium
DOI: 10.48370/ofd/fcizsq/bwgxwn
title: HMW_Arenaria_serpyllifolia_L._H_0476.jpg

description: :unav
DOI: 10.48370/ofd/fcizsq
title: Piaskowiec macierzankowy (Arenaria serpyllifolia L.), 476

description: Herbarium
DOI: 10.48370/ofd/bubdds/ne1pvf
title: HMW_Arenaria_serpyllifolia_L._H_2094.jpg

description: :unav
DOI: 10.48370/ofd/bubdds
title: Piaskowiec macierzankowy (Arenaria serpyllifolia L.), 2094

description: Herbarium
DOI: 10.48370/ofd/hw9hv1/t1vxl7
title: HMW_Arenaria_serpyllifolia_L._H_2059.jpg

description: :unav
DOI: 10.48370/ofd/hw9hv1
title: Piaskowiec macierzankowy (Arenaria serpyllifolia L.), 2059

description: Herbarium
DOI: 10.48370/ofd/t3fvbi/nzgfd8
title: HMW_Arenaria_serpyllifolia_L._H_1588.jpg

description: :unav
DOI: 10.48370/ofd/t3fvbi
title: Piaskowiec macierzankowy (Arenaria serpyllifolia L.), 1588

description: Herbarium
DOI: 10.48370/ofd/33wmya/dmobba
title: HMW_Cotinus_coggygria_Scop._H_09303.jpg

description: :unav
DOI: 10.48370/ofd/33wmya
title: Perukowiec podolski (Cotinus coggygria Scop.), 9303

description: Herbarium
DOI: 10.48370/ofd/a5ee0y/7rg4en
title: HMW_Digitaria_ischaemum_(Schreb.)_H._L._Mühl._H_0856.jpg

description: :unav
DOI: 10.48370/ofd/a5ee0y
title: Palusznik nitkowaty (Digitaria ischaemum (Schreb.) H. L. Mühl.), 856

description: Herbarium
DOI: 10.48370/ofd/5dtsid/ybgt2f
title: HMW_Digitaria_ischaemum_(Schreb.)_H._L._Mühl._H_7514.jpg

description: :unav
DOI: 10.48370/ofd/5dtsid
title: Palusznik nitkowaty (Digitaria ischaemum (Schreb.) H. L. Mühl.), 7514

description: Herbarium
DOI: 10.48370/ofd/zpozpu/1r5wem
title: HMW_Digitaria_ischaemum_(Schreb.)_H._L._Mühl._H_7483.jpg

description: :unav
DOI: 10.48370/ofd/zpozpu
title: Palusznik nitkowaty (Digitaria ischaemum (Schreb.) H. L. Mühl.), 7483

description: Herbarium
DOI: 10.48370/ofd/5dcrhr/g5nhou
title: HMW_Digitaria_ischaemum_(Schreb.)_H._L._Mühl._H_6948.jpg

description: :unav
DOI: 10.48370/ofd/5dcrhr
title: Palusznik nitkowaty (Digitaria ischaemum (Schreb.) H. L. Mühl.), 6948

description: Herbarium
DOI: 10.48370/ofd/3bmemz/54hnwa
title: HMW_Digitaria_ischaemum_(Schreb.)_H._L._Mühl._H_6169.jpg

description: :unav
DOI: 10.48370/ofd/3bmemz
title: Palusznik nitkowaty (Digitaria ischaemum (Schreb.) H. L. Mühl.), 6169

description: Herbarium
DOI: 10.48370/ofd/p1ee1d/nmkf11
title: HMW_Digitaria_ischaemum_(Schreb.)_H._L._Mühl._H_5824.jpg

description: :unav
DOI: 10.48370/ofd/p1ee1d
title: Palusznik nitkowaty (Digitaria ischaemum (Schreb.) H. L. Mühl.), 5824

description: Herbarium
DOI: 10.48370/ofd/4ugpmz/4msmw1
title: HMW_Digitaria_ischaemum_(Schreb.)_H._L._Mühl._H_5659.jpg

description: :unav
DOI: 10.48370/ofd/4ugpmz
title: Palusznik nitkowaty (Digitaria ischaemum (Schreb.) H. L. Mühl.), 5659

description: Herbarium
DOI: 10.48370/ofd/j3sxij/lkczrr
title: HMW_Digitaria_ischaemum_(Schreb.)_H._L._Mühl._H_4947.jpg

description: :unav
DOI: 10.48370/ofd/j3sxij
title: Palusznik nitkowaty (Digitaria ischaemum (Schreb.) H. L. Mühl.), 4947

description: Herbarium
DOI: 10.48370/ofd/cj1p0l/3s0giq
title: HMW_Anthericum_ramosum_L._H_8034.jpg

description: :unav
DOI: 10.48370/ofd/cj1p0l
title: Pajęcznica gałęzista (Anthericum ramosum L.), 8034

description: Herbarium
DOI: 10.48370/ofd/7gvcjf/18ct54
title: HMW_Anthericum_ramosum_L._H_5406.jpg

description: :unav
DOI: 10.48370/ofd/7gvcjf
title: Pajęcznica gałęzista (Anthericum ramosum L.), 5406

description: Herbarium
DOI: 10.48370/ofd/qmbjiq/lulp98
title: HMW_Anthericum_ramosum_L._H_5243.jpg

description: :unav