cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5555284.v1
title: OIM2 3D

description: 3D microCT reconstruction of mouse tibiae-OIM2
DOI: 10.17632/p8gk496r47
title: JML_Exp1&Exp2

description: Includes raw data for Experiments 1 and 2 (Journal of Memory and Language)
DOI: 10.3535/t0v-ywg-0as
title: †Asaphus expansus (Wahlenberg, 1821)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y2t-7b0-ff4
title: †Estoniops panderi (Schmidt, 1881)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.15103478
title: Data Products for Eclipse Mapping with MIRI: 2D Map of HD 189733b from 8μm JWST MIRI LRS Observations

description: This repository contains fit output details as well as the data files necessary to recreate the results of paper "Eclipse Mapping with MIRI: 2D Map of HD 189733b from 8μm JWST MIRI LRS Observations" by Lally et al., 2025, 10.3847/2041-8213/adc096.
DOI: 10.5281/zenodo.15103479
title: Data Products for Eclipse Mapping with MIRI: 2D Map of HD 189733b from 8μm JWST MIRI LRS Observations

description: This repository contains fit output details as well as the data files necessary to recreate the results of paper "Eclipse Mapping with MIRI: 2D Map of HD 189733b from 8μm JWST MIRI LRS Observations" by Lally et al., 2025, 10.3847/2041-8213/adc096.
DOI: 10.6084/m9.figshare.13573502.v1
title: Dataset

description: Data were extracted from patients’ medical records a. Demographic, anthropometric, hematochemical, bacteriological and radiological variables were those observed at ED admittion. Vitamin D samples were analyzed with the Elecsys Vitamin D total assay electro-chemiluminescence binding assay (Roche). Comorbidities were collected according to Charlson-age adjusted definitions, sepsis severity was assessed according to APACHE II and SOFA and SAPS III. Microbiologic results represent results from the first 48hours after admission
DOI: 10.6084/m9.figshare.28077983.v4
title: <b>Exploring the Therapeutic Potential of </b><b>Huoshan Dendrobium Zengye Jiedu Formula </b><b>in </b><b>Treating Radiation-Induced Oral Mucositis via Modulation of the EGFR/PI3K/AKT Signaling Pathway: An Integrated Approach Using Network Pharmacology, Molecular Docking, and Experimental Validation</b>

description: A total of 102 bioactive components and 379 potential targets for RIOM were identified. GO and KEGG enrichment analyses suggest that HDZJF exerts therapeutic effects on RIOM by modulating processes such as angiogenesis, inflammation, and apoptosis through pathways like PI3K-AKT. Molecular docking confirmed strong binding affinities between HDZJF components and key targets. In vivo, HDZJF reduced inflammation, promoted mucosal healing, improved body weight, and modulated protein expression related to EGFR/PI3K/AKT.
DOI: 10.3535/v28-md7-2aw
title: †Asaphus (Neoasaphus) kowalewskii (Lawrow, 1856)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x8m-xqd-zbc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19188722.v1
title: melikeavcı* The Effect of Awareness Raising and Myths on Attitudes Toward Survivors of Sexual Assault

description: The main purpose of the study is to measure the effect of the rape myths and the awareness raising video on attitudes toward rape victims. Rape myths were presented to participants as nontraditional, traditional and neutral conditions. The awareness video explained that rape myths are false beliefs. Attitudes were measured before and after the video for each scenario condition. 131 participants are included in this study. 3x2 Within- between factorial design was used. Illinois rape myth scale and attitudes toward rape victim scale were used. As a result, attitudes changed positively after the awareness video. The significant effect was observed in traditional and nontraditional scenario conditions but not in neutral condition. Rape myths and attitudes toward rape victim scale positively correlated indicating that as rape myths increased, negative attitudes towards survivors increased. There was no difference between males and females in terms of rape myths.Consequently, females changed their attitudes in a positive way after the awareness video, males did not.
DOI: 10.6084/m9.figshare.25998223.v1
title: Social and economic impacts of non-communicable diseases by gender and its related drivers: a literature review

description: This study aims to identify economic and social impacts of NCDs by gender and its related drivers. Following the guidelines proposed in the Cochrane Manual for Systematic Reviews of Interventions and the PRISMA Statement, we conducted a narrative and structured literature review to identify the economic (direct medical and non-medical, and indirect costs) and social (right to health, employment, poverty, social exclusion, and others) impacts of NCDs by gender, and its structural, sociodemographic, health conditions, political and health systems drivers, for the period 2002-2022, in English and Spanish. Reviewed studies were described according to country and research context, temporal evolution, gender, impacts of NCDs and drivers. In order to contribute to transparency and replicability of research, the authors of this study made the data available. Any other use than exploring or replicating the results of the above-mentioned paper is not authorized and shall not be used without the previous authorization of the investigators. If you are interested in analyzing this database for original research purposes please contact Edson Serván-Mori (eservan@insp.mx)
DOI: 10.3535/czl-fek-p3m
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7387370.v1
title: NGTAS_NA12878

description: Fastq files for the NA1278 dilution series from cell free DNA
DOI: 10.11583/dtu.26195285.v1
title: MD17 data for graph2mat

description: Creators
------------
Pol Febrer (pol.febrer@icn2.cat, ORCID 0000-0003-0904-2234)
Peter Bjorn Jorgensen (peterbjorgensen@gmail.com, ORCID 0000-0003-4404-7276)
Arghya Bhowmik (arbh@dtu.dk, ORCID 0000-0003-3198-5116)
<br>
Related publication
-------------------
The dataset is published as part of the paper:
"GRAPH2MAT: UNIVERSAL GRAPH TO MATRIX CONVERSION FOR ELECTRON DENSITY PREDICTION"
(https://doi.org/10.26434/chemrxiv-2024-j4g21)
https://github.com/BIG-MAP/graph2mat
<br>
Short description
------------------
This dataset contains the Hamiltonian, Overlap, Density and Energy Density matrices
from SIESTA calculations of a subset of the MD17 aspirin dataset. The subset is taken
from the third split in (https://doi.org/10.6084/m9.figshare.12672038.v3).
<br>
SIESTA 5.0.0 was used to compute the dataset.
<br>
Contents
-----------------
<br>
The dataset has two directories:
<br>
- pseudos: Contains the pseudopotentials used for the calculation (obtained from
http://www.pseudo-dojo.org/, type NC SR (ONCVPSP v0.5), PBE, standard accuracy)
- splits: The data splits used in the published paper. Each file "splits_X.json"
contains the splits for training size X.
<br>
And then, three directories containing the calculations with different basis sets:
- matrix_dataset_defsplit: Uses the default split-valence DZP basis in SIESTA.
- matrix_dataset_optimsplit: Uses a split-valence DZP basis optimized for aspirin.
- matrix_dataset_defnodes: Uses the default nodes DZP basis in SIESTA.
<br>
Each of the basis directories has two subdirectories:
- basis: Contains the files specifying the basis used for each atom.
- runs: The results of running the SIESTA simulations. Contents are discussed next.
<br>
The "runs" directory contains one directory for each run, named with the index
of the run. Each directory contains:
- RUN.fdf, geom.fdf: The input files used for the SIESTA calculation.
- RUN.out: The log of the SIESTA run, which apar
- siesta.TSDE: Contains the Density and Energy Density matrices.
- siesta.TSHS: Contains the Hamiltonian and Overlap matrices.
<br>
Each matrix can be read using the sisl python package (https://github.com/zerothi/sisl)
like:
<br>
```python
import sisl
<br>
matrix = sisl.get_sile("RUN.fdf").read_X()
```
<br>
where X is hamiltonian, overlap, density_matrix or energy_density_matrix.
<br>
To reproduce the results presented in the paper, follow the documentation of the graph2mat
package (https://github.com/BIG-MAP/graph2mat).
<br>
Cite this data
------------------
<br>
https://doi.org/10.11583/DTU.c.7310005
© 2024 Technical University of Denmark
<br>
<br>
License
-----------------
This dataset is published under the CC BY 4.0 license.
This license allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator.
<br>
DOI: 10.3535/3rn-xlj-xe0
title: †Rhynchospirina Schuchert & Le Vene, 1929

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5rg-twh-xbh
title: Hyolithes acutus Eichwald

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22219546.v1
title: nrITS alignments Antarctic Galerina

description: nrITS sequence alignments used in the work entitled: <strong>Deadly mushrooms of the genus </strong><em><strong>Galerina</strong></em><strong> found in Antarctica have colonized the continent as early as the Pleistocene</strong> Authors: ISAAC GARRIDO-BENAVENT, ROBERT A. BLANCHETTE & ASUNCIÓN DE LOS RÍOS
DOI: 10.3535/8xg-d6e-sn4
title: Hyolithes sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c4t-7pw-4ay
title: †Valdariops eichwaldi (Schmidt, 1881)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.6182159.v2
title: Nutrition Eduation Ecuador

description: This is a Book for Nutrition Education for Children age 5-7 to learn about local foods. Also a manual for Nutrition Education for rural women.
DOI: 10.3535/eyz-501-g2r
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x82-l9e-5bt
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28614701.v1
title: Protected areas mitigate human-induced nocturnal shifts in large mammal communities in Southwest China

description: Nocturnality of 29 mammal detections from 1897 camera traps within the Camera-trapping Network for the Mountains of Southwest China and corresponding environmental variables.Species: common name for detected speciesPA_ID: ID of the protected areas where the species is detectedDate: date of the detectionTime: clock time of the detectionsunTime: relative solar time of the detectionNocturnality: nocturnality index of the detectionHM: human modification index at the camera locationPA: whether the camera is located inside (PA = 1) or outside (PA = 0) PAsPA_HM: interaction term between PA and HMJulianDate & JulianDate2: count of consecutive days since the start of each year and its quadratic termLST: land surface temperatureELE: elevation
DOI: 10.3535/la5-6hf-9lg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xbb-xl0-8q6
title: Mastopora C.E.I. von Eichwald, 1840

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23302055.v1
title: Table S3

description: Data summary of the pollinator visitation measurements performed in "Polyploidy-induced floral changes lead to unexpected pollinator behavior in <em>Arabidopsis arenosa</em>" by Schmickl et al (2023).
DOI: 10.6084/m9.figshare.c.3734155_d1.v1
title: Additional file 1: of Discrimination of three genetically close Aspergillus species by using high resolution melting analysis applied to indoor air as case study

description: Normalized melt curves and difference curves obtained for each Aspergillus strain used during the development of the HRM assay (XLSX 105Â kb)
DOI: 10.3535/119-8dh-anl
title: Conularia sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/95z-4ln-y47
title: †Bellerophon Montfort, 1808

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xcy-n11-l5e
title: Hyolithes sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.10001873.v1
title: Another look at the online processing of scalar inferences: an investigation of conflicting findings from visual-world eye-tracking studies

description: Previous psycholinguistic studies that compared the time course of interpretation for <i>pragmatic some</i> and <i>literal all</i> have returned mixed results. In particular, a delayed <i>pragmatic some</i> has been found in some studies but not in others. We explain these conflicting findings in terms of factors which are independent of incremental semantic/pragmatic interpretation. Two offline experiments provide evidence of the effect of these factors. Three visual-world studies showed that they influence participants’ eye movements in online comprehension. We introduce a new measure for investigating the time course of scalar inference. This new measure allows us to reason about the time course question based on the difference in verification procedures between numbers and quantifiers. Results from our visual-world studies suggest that deriving the pragmatic interpretation is not delayed relative to the semantic interpretation.
DOI: 10.6084/m9.figshare.25093385.v1
title: Brasenia schreberi proteins

description: Draft genome of Brasenia schreberi, a worldwide distributed and endangered aquatic plant<br>
DOI: 10.3535/c1e-vdy-bp7
title: Hyolithes sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gzb-mnq-hsg
title: Hyolithes acutus Eichwald

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22105817.v4
title: A tectonic reconstruction model for Aotearoa-New Zealand from the mid-Late Cretaceous to the present day - Supplementary data

description: This document contains descriptions of the data sources and background relating to the development of the tectonic crustal block reconstruction model in the paper ‘A tectonic reconstruction model for Aotearoa-New Zealand from the mid-Late Cretaceous to the present day’ published in the New Zealand Journal of Geology and Geophysics, available at: https://doi.org/10.1080/00288306.2023.2239175
DOI: 10.3535/69b-ev4-mpk
title: †Platysolenites Pander in Eichwald, 1854

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7f0-9ne-9wk
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/41x-4zf-4e0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ny1-bzn-rwh
title: Hyolithes mickwitzi Öpik

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.8313794.v1
title: Genomic features and evolution of the conditionally dispensable chromosome in the tangerine pathotype of Alternaria alternata

description: The tangerine pathotype of the ascomycete fungus Alternaria alternata is the causal agent of citrus brown spot, which can result in significant losses of both yield and marketability for tangerines worldwide. A conditionally dispensable chromosome (CDC), which harbors the host-selective ACT toxin gene cluster, is required for tangerine pathogenicity of A. alternata. To understand the genetic makeup and evolution of the tangerine pathotype CDC, we isolated and sequenced the CDCs of the A. alternata Z7 strain and analyzed the function and evolution of their genes.
DOI: 10.3535/5qn-rxh-c1c
title: Pterygotus sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hw1-3ar-fg9
title: †Scenella Billings, 1872

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1189262.v4
title: Micro-CT images

description: Micro-CT images of different rocktypes. The images can be visualised by opening the Nrrd header files provided (.nhdr suffix) in visualization software such as Paraview or ImageJ (http://fiji.sc/Fiji), You can also open the .nhdr file in a text editor to see the image and voxel sizes. See the link provided for further information.
DOI: 10.17632/b9vzvyftz5
title: Evaluación del efecto de imágenes de advertencia sanitaria en las cajetillas de cigarrillo

description: Evaluación del efecto de imágenes de advertencia sanitaria en las cajetillas de cigarrillo en estudiantes universitarios. Se realizó un estudio transversal con participación de una muestra de 128 estudiantes universitarios. Se evaluaron 9 imágenes de advertencia sanitaria. Se aplicó un cuestionario autoadministrado Self-Assesment Manikin (SAM).
DOI: 10.3535/2ky-lch-06b
title: Conularia sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ecw-phh-5bf
title: †Scenella Billings, 1872

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24634410.v1
title: Direct shear experiment and original acoustic emission data from simulations of fault stick-slip in granular materials

description: These are the raw data from the study "<b><i>Micro-mechanical Behavior of Fault Stick-slip Under Direct Shear: Insight From Acoustic Emission Spectrum Characteristics</i></b>", which primarily includes acoustic emission data and direct shear data.
DOI: 10.6084/m9.figshare.28078958.v2
title: Parameters of seaport integrated energy system

description: Parameters of seaport integrated energy system
DOI: 10.3535/9ql-7j2-0dt
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s9t-azz-72z
title: Hyolithes sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a46-9ex-cd6
title: †Spirifer Sowerby, 1818

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/avw-gbz-vdl
title: Conularia sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p4k-f6v-nw5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16817338.v1
title: Seurat object for scRNA-seq count matrix

description: Seurat object for "Single-cell transcriptomic identified HIF1A as a target for attenuating acute rejection<br>after heart transplantation"
DOI: 10.6084/m9.figshare.24147135.v2
title: Data for <i>Cloaking a qubit in a cavity</i>.

description: <br>This repository contains the source data for the article "Cloaking a qubit in a cavity" by Cristóbal Lledó, Rémy Dassonneville, Adrien Moulinas, Joachim Cohen, Ross Shillito, Audrey Bienfait, Benjamin Huard, and Alexandre Blais, <i>Nat Commun</i> <b>14</b>, 6313 (2023). Link to article: https://doi.org/10.1038/s41467-023-42060-5Figure 2, Vacuum Rabi oscillations in a filled cavity:For panel <b>b</b>, data file "Figure-2_Panel-b_Color-scale-normalization-limits.npy" is an array [min, max] used for the normalization of the color scale plotted with Matplotlib's contourf.Figure 3, Cancellation of the ac-Stark shift and measurement-induced dephasing:For panel <b>a</b>, the data files for the spectral densities are organized in 2D arrays of dimensions 6x907183. Each row correspond to a different value of the drive amplitude, ordered in increasing strength.All other files include a single 1D array.Figure 4, Arm and release qubit readout:The error bars in panel <b>b</b> are one over the square root of the number of shots N=5 x 10^5.Figure 5, Gate error:Data file "Figure-5_No-drives-X-gate-error.npy" is a 1x2 array [avg_error, error_bar] with the average X-gate error and its associated error bar for the case of no cavity nor cancellation drives. This corresponds to the gray shaded area in the figure.Data file "Figure-5_Numerical-X-gate-error-with-cancellation.npy" contains a single datum corresponding to the average gate error obtained from numerical simulations. This corresponds to the dashed red horizontal line in the figure.Supplementary Figure1, Numerical X-gate average error:Data files "Supplementary-Figure-1_Panel-b_Y-axis_Errors.npy", "Supplementary-Figure-1_Panel-c_Y-axis_Errors.npy", and "Supplementary-Figure-1_Panel-d_Y-axis_Errors.npy" contain a 4x21, 4x51, and 4x51 array, respectively. In each of these arrays, each row correspond to a different value of the drive amplitude, ordered in increasing strength.Supplementary Figure 2, Predicted X-gate average error accounting for the Purcell cavity:Data file "Supplementary-Figure-2_X-gate-error-with-cancellation.npy" contains a single datum corresponding to the average gate error obtained with cancellation. This corresponds to the dashed red horizontal line in the figure.Supplementary Figure 5, Readout overlap error comparison for standard disperive and arm-and-release methods:The gray vertical and horizontal lines are at 7.132 and 0.154, respectively. The phase is in units of 2pi, so it goes from -1/2 to +1/2.
DOI: 10.3535/07p-zf5-tnp
title: Conularia sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/469-p41-vld
title: Conularia sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/ct532ygrpf
title: Data for "Analytical shortcuts to multiple-objective portfolio optimization: Investigating the nonnegativeness of portfolio weight vectors of equality-constraint-only model series and implications for capital asset pricing models"

description: The data
DOI: 10.17632/jdfnn35mrx
title: A program system for ab initio mo calculations on vector and parallel processing machines I. Evaluation of integrals

description: Abstract We present a program system for ab initio molecular orbital calculations on vector and parallel computers. The present article is devoted to the computation of one- and two-electron integrals over contracted Gaussian basis sets involving s-, p-, d- and f-type functions. The McMurchie and Davidson (MMD) algorithm has been implemented and parallelized by distributing over a limited number of logical tasks the calculation of the 55 relavant classes of integrals. All sections of the MMD algorithm... Title of program: ASTERIX-INTEGS Catalogue Id: ABRB_v1_0 Nature of problem Evaluation of the one- and two-electron molecular integrals generated by a basis of contracted Gaussian-type orbitals (CGTOs). Versions of this program held in the CPC repository in Mendeley Data ABRB_v1_0; ASTERIX-INTEGS; 10.1016/0010-4655(90)90066-A This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.3535/5d3-4ry-fh4
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9rg-yq1-qzd
title: †Siphonotreta Verneuil, 1845

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.