cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14675505.v1
title: fMRI_data

description: Data were acquired at the Stanford University Richard M. Lucas Center for Imaging on a 3T General Electric SIGNA Premier scanner using a 48-channel head coil (GE Healthcare, Milwaukee, WI, USA). Blood oxygenation level-dependent (BOLD) functional MRI data were acquired using a simultaneous multislice gradient-echo echo-planar pulse sequence. Sequence parameters were similar to those used as part of the Human Connectome Project: TR 1000 ms, TE 30 ms, flip angle 64°, 2.4 mm isotropic voxels, matrix 88 × 88 × 65, multi-slice 5× acceleration. Minimization of signal dropout was achieved by visually selecting a slice plane approximately 25° from the anterior-posterior commissural plane towards the coronal plane. A T1-weighted anatomical scan was acquired in each session using a 3DFSPGR three-dimensional sequence: TR 1891 ms, TE 1.172 ms, TI 400 ms, flip angle 11°, 1.0 × 1.0 × 1.2 mm voxels, matrix 256 × 192 × 132. A gradient-echo B0 fieldmap was acquired to correct for spatial distortions: TE 6.5, 8.5 ms with slice prescription/spatial resolution matched to the BOLD sequence.Data collected during a visual fixation task were used for functional connectivity analysis. The patient fixated a black ‘+’ symbol presented at the center of a light gray screen. The patient was asked to remain as still as possible, and to remain awake and focused throughout the duration of each run. In between runs, the patient was asked if he was able to successfully stay still during the previous run, to reinforce the expectation that this should be closely monitored. Each run lasted 7m 2s and three functional runs were collected.
DOI: 10.6084/m9.figshare.29083628.v1
title: Gridded data of building material stocks of brick

description: 5,538,063 records are weight in urban building MS of brick in two urban agglomerations from 2000 to 2020 at 500×500m grid scale.
DOI: 10.6084/m9.figshare.8850860.v1
title: Acute Deletion of METTL14 in β-cells of adult mice results in glucose intolerance

description: <b>Introduction</b>: To understand the molecular mechanism of glucose intolerance, we performed RNA sequencing to detect the gene expression in beta-cell <i>Mettl14</i> special knockout mice and wild type mice.<b> Material and Methods</b>: Polyadenylated RNA was further enriched from total RNA by using Dyabeads mRNA Purification Kit. All samples were sequenced using Illumina Hiseq 4000 at the University of Chicago Genomic Facility. Sequence reads were aligned to mouse transcriptome (GRCm38.vM17 downloaded from genecode) and quantified using Kallisto at pair-end mode with 30 tomes bootstrap. Transcript level differential expression analysis was performed using sleuth. Inference of differential expression between WT and beta KO mice was made by likelihood ratio and log fold change was obtained using the Wald test. The inference leveraged bootstrap to take uncertainty of quantification into account and leveraged biological replicates to take account the biological variability.<b> Result: </b>The expression levels of 106 transcripts were significantly altered in beta KO islets compared to WT islets. Among those altered genes, 104 genes were upregulated and 2 genes were downregulated.<b>Conclusion:</b><i> Mettl14</i> special knockout in beta-cell induces glucose intolerance by changing genes trascription.<br>
DOI: 10.17632/244dy8wfds
title: Data for: Numerical Modeling of a Benchmark Experiment on Equiaxed Solidification of a Sn-Pb alloy with Electromagnetic Stirring and Natural Convection

description: Boundary conditions for AFRODITE benchmark solidification experiment with the electromagnetic stirring opposite to the direction of the flow initiated by the buoyancy force. Size of the cavity is 10cm x 6 cmx 1cm. Given data are obtained from the experimental measurements of temperature at the right and left heat exchangers and in the liquid in assumption of the conductive heat transport in the horizontal direction. Thus convective heat transfer near the boundary is neglected (cf. related publication). These are "raw data" without additional treatment
DOI: 10.17632/8zj5nbkt47
title: Feature selection for CO2RR

description: These data represent the scaled data of a number of features of a membrane electrode assembly.  The accompanying code written in Python is for ascertaining the appropriate choice of features to use for machine learning.  It also includes the routine for reverse engineering for various ML algorithms to allow for rational choice of model.
DOI: 10.17632/ry52gnvxkh
title: Supplemental Methods and Results for "Association between atopic dermatitis, depression and suicidal ideation: A systematic review and meta-analysis"

description: Supplemental Methods and Results for "Association between atopic dermatitis, depression and suicidal ideation: A systematic review and meta-analysis"
DOI: 10.6084/m9.figshare.22572850.v1
title: oxDNA simulation for ARPLA

description: The data here contains the oxDNA model, simulation code, and results of the ARPLA system. The goal of this simulation is to estimate the spatial properties of the ARPLA system.
DOI: 10.6084/m9.figshare.14253047.v1
title: Lisrel and SmartPLS output for Journal 18

description: SEM output using Lisrel and SmartPLS<br>
DOI: 10.6084/m9.figshare.14872782.v1
title: 1000Research_Journal_An Empirical Study on the Impact of Virtual Learning on Multimedia University Student Performance_TaiHenToong.csv

description: The study involved data analyses using SPSS to analyse the survey data collected from undergraduate students in Multimedia University. The sampling technique applied for this study was convenient sampling technique. For data collection purpose, self-administered online surveys was applied in this study. A total of 210 diploma students responded to the online surveys. As for data analyses, the statistical technique applied in the context of this study was multiple regression analysis.
DOI: 10.6084/m9.figshare.19619700.v4
title: Genome of elegance coral Catalaphyllia jardinei (Euphylliidae)

description: 1) *.gz files: The genome and annotation files of elegance coral Catalaphyllia jardinei. <br> 2) Figure 2: Oxford plots between <em>C. jardiner</em> and other species, the scripts and raw data were deposited in github: https://github.com/xieyichun50/coral_genome_Catalaphyllia_jardinei/tree/main/data/oxfordplot
DOI: 10.17632/hzgysvg55k
title: International visitors and misery index in Mexico

description: We present the data to compute the compensated misery index proposed by Hortalà and Rey (2011), and the number of international visitors in Mexico. Besides, in the Excel document named “misery index” we present our computation of such an index. These data were used to estimate a bivariate SVAR model that aims to analyze the effect of the arrival of international visitors to Mexico on the misery index. Likewise, we present the dummy variables that were introduced as exogenous variables in the SVAR model. Finally, we are also sharing an EViews file with the series used to compute the model, and the model we have estimated.
DOI: 10.17632/ns2dryjd25
title: Precedent phenomena of contemporary Russian and Spanish massmedia as cognitive structures of language personality = Прецедентные феномены современных русских и испанских массмедиа как когнитивные структуры языковой личности

description: The relevance of the research is due to the scientific interest in the precedent phenomenon, which occupies an important place in the discursive paradigm of the Russian and Spanish languages. Precedent phenomena that translate traditional cultural values and newly created ones are more widely represented in the language of mass media – the main communicatively significant environment of modern society. Today, the media offer us a certain media picture in which the world is not displayed but interpreted. The role of precedent phenomena in the medial space organization and their functioning in the media text, which is characterized by the maximum degree of intertextuality, is studied using the material of the Russian and Spanish languages. The cognitive approach proposed in the article is aimed at revealing the role of knowledge (linguistic, non-linguistic, individual) in the formation of the value of the precedent unit, which is the primary object of research in cognitive science. Using the example of universal precedent names (Napoleon, Cinderella, Don Quixote, Adam), it is shown that they fix the culturally significant (thematic) knowledge shared by the communicants, usually functioning in an implicit form. The study of binary structures (meaning) of the concept captures the dynamics of the development of the precedent name’s significance, actual changes in the construction of the core components of sense, the desemantization of the precedent name. Differences in interpretation in Russian and Spanish indicate different dominant significant content and show that the scientific significance of the invariant of universal precedent names reflects not the reality as such, but the cognitive structures of the linguistic personality of a particular society.
DOI: 10.6084/m9.figshare.20597478.v1
title: BL-OG Treatment for PNI

description: GraphPad Prism files of counts and sizes of motoneurons (BL-OG.Motoneurons.pzfx) and sensory neurons ( DRG Counts.pzfx and DRGSize Analysis.pzfx) whose axons regenerated successfully after BL-OG treatment for peripheral nerve injury. Files contain raw data, results of statistical analysis, and figures.
DOI: 10.6084/m9.figshare.26870551.v1
title: Delivery routing for electric vehicles with en-route mobile battery swapping

description: The following instances are originally presented in the paper <i>Delivery routing for electric vehicles with en-route mobile battery swapping</i>.The data includes 148 instances corresponding to different scales and scenarios, which is based on that of Raeesi and Zografos (2020). These instances are categorised based on the geographical location of customers into three types: clustered (C), randomly distributed (R), and a combination of clustered and randomly distributed (RC). Furthermore, each instance is divided into two subsets: type 1 and type 2. Type 1 features a shorter planning horizon and tighter time windows, whereas type 2 is the opposite. Additionally, four instances from a real-world case provided by JD.com, one of the largest e-commerce companies in China. These instances include 150 and 200 customer sites.
DOI: 10.6084/m9.figshare.5481529.v1
title: Supplementary Tables S2, S14, and S15

description: Perofmance of fast phylogenetic programs in likelihood score maximization on single-gene alignments. Likelihood scores in these tables were calculated using RAxML (Table S2), IQ-TREE (Table S14), and phangorn (Table S15), respectively.
DOI: 10.17632/vx26gfy8cx
title: The τ decay library TAUOLA, version 2.4

description: Abstract The τ decay library TAUOLA has been enriched. The present version of the program includes more than twenty decay channels, including: (a) leptonic modes τ^-→ nνe^-→ nνμ^- (γ), (b) one-meson modes: νπ^- , νK^- , (c) t wo-meson modes: νπ^-π^0 (ρ{variant}^- ), νK^0 π^-(K^(*-)), νK^-π^0 (K^(*-)), (d) three-meson modes: νπ^- 2ν ^0 (a^- _1 ), ν2π^- π^+(a^- _1 ), νK^+K^-π^- , ν K̄^0 K^0 π^- , νK^-K̄^0 π^0 , νK^-π^0 π^0 , νK^-π^- π^+ , νK^0 π^0 π^- , νηπ^- π ^0 , (e) four-pi... Title of program: TAUOLA, version: 2.4 Catalogue Id: ABZP_v3_0 [ACNS] Nature of problem Comparison with the previous version, and reasons for the new version The tau decay library [2] is enriched by new decay modes involving kaons: tau- -&gt;nuK+K-pi-, nuKbar^0K^0pi-, nuK-K^0pi^0, nuK-pi^0pi0, nuK-pi-pi+, nuK^0pi^0pi-, etanupi-pi^0, the omega pi contribution to nupi-pi0gamma. For the tau decay modes into four pions tau- -&gt;nu2pi-pi+pi0, pi-3pi0, the simplified dynamical treatment has been replaced by a more appropriate one, in particular, the omegapi contribution and rho enhanc ... Versions of this program held in the CPC repository in Mendeley Data ABZP_v1_0; TAUOLA, version 1.5; 10.1016/0010-4655(91)90038-M ABZP_v2_0; TAUOLA, version: 2.1; 10.1016/0010-4655(92)90092-D ABZP_v3_0; TAUOLA, version: 2.4; 10.1016/0010-4655(93)90061-G This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.6084/m9.figshare.19529635.v1
title: Dataset of Women's Language Features Used by Adele in <i>The 30 Interview<i> Video</i></i>

description: Dewi, Krisna; Ediwan, I Nyoman Tri; Rajeg, Gede Primahadi Wijaya (2022): Dataset of Women's Language Features Used by Adele in <i>The "30" Interview Video. </i>Figshare. Dataset. https://figshare.com/s/fa850951e421574b3e44
DOI: 10.6084/m9.figshare.19641192.v1
title: Vaccine usage in a commercial pig farm in South Africa: 2016-2018

description: The total number of vaccine dosages was calculated by multiplying the total dosages per vial as stated on the SPC with the total number of vials purchased and summed per vaccine according to disease targeted, per year.
DOI: 10.6084/m9.figshare.28588964.v1
title: Strain and strain tremor data related to the 2012-2023 Etna lava fountains at South-East Crater (SEC)

description: The file contains the value of the features selected from the high-precision borehole strainmeter signal recorded during 84 lava fountains occurred at Etna volcano in the period 2012-2023 at the South-East Crater.
DOI: 10.6084/m9.figshare.28823087.v2
title: Ampelopsis data

description: Ampelopsis is a genus of the grape family Vitaceae, discontinuously distributed in the temperate to subtropical zones of the Northern Hemisphere but mostly diversified in East Asia. Previous phylogenetic studies on Ampelopsis have mainly been based on a few chloroplast markers, resulting in unresolved phylogenetic relationships for the East Asian taxa. Here, we carried out a phylogenetic reconstruction of Ampelopsis and intrageneric reticulate evolution analyses for the first time based on extensive single low-copy nuclear and chloroplast genomic data obtained by Hyb-Seq sequencing. Both nuclear and chloroplast genomic data strongly support the monophyly of Ampelopsis with its sequential division into three major lineages corresponding to their biogeographic distribution from North America, Europe to West Asia, and East Asia, respectively. The East Asian Ampelopsis is largely grouped into two major clades but characterized by extensive topological conflicts among individual nuclear gene trees. Plastid tree also showed high incongruence from the nuclear tree. Gene tree estimation error and gene flow were identified as the major source of phylogenetic conflicts within the East Asian lineage, which most likely resulted from recent and rapid divergence. Our results emphasize that rapid divergence accompanied by gene introgression played a significant role in the complex diversification pattern of Ampelopsis and many other plant lineages in East Asia.
DOI: 10.6084/m9.figshare.29134052.v1
title: rumen_dereplicated_MAGs.tar.gz

description: "MAGs generated in the study <i>'New Insights into Microbial Nitrogen Utilization in the Rumen Enabled by Genome-Resolved Multi-Omics'</i>."<b>Background</b>Optimizing nitrogen (N) utilization in ruminant production systems holds both economic and environmental significance. However, traditional paradigms of N metabolism, derived primarily from well-studied model rumen bacteria, cannot fully capture the diverse and complex N metabolic dynamics within the rumen ecosystem.<br><b>Results</b>To address this gap, we utilized comparative genomics and genome-resolved multi-omics analyses using a curated set of microbial genomes to investigate N assimilation and regulation in rumen microbes. We discovered that canonical mechanism of ammonia assimilation and regulation, such as the glutamine synthetase (GS)/glutamate synthase (GOGAT) pathways and its regulatory proteins, are absent in the genomes of many key and predominant rumen microbes, which likely utilize alternative pathways for ammonia assimilation. These findings challenge the applicability of <i>E. coli</i>-based N regulation models to rumen bacteria. We further linked polysaccharide utilization and ammonia assimilation across hundreds of rumen microbial species. Furthermore, we identified specific microbial species involved in ureolysis and denitrification, as well as phages carrying auxiliary metabolic genes that perform N assimilation. Using an animal trial involving 11 pairs of lamb twins in a crossover design, we demonstrated that dietary crude protein (CP) concentrations had minimal impact on rumen microbiome composition and expression of N assimilation genes. Instead, shifts in concentrate levels triggered alterations in N assimilation, including increased expression of amino acid biosynthesis pathways.<br><b>Conclusion</b>These findings indicate a nuanced, species-specific microbial response to dietary interventions, highlighting the limitations of traditional N metabolism models applied to rumen microbes and the need for more granular studies of rumen microbial ecosystems.
DOI: 10.17632/8gc9m5y9by
title: WVU_JAL_CJLProject2023

description: This data repository contains data files from the WVU_JAL_CJL manuscript assessing the role of repeated phase advances and chronic jet lag and its involvement as a risk factor for vascular cognitive impairment and dementia (VCID) in aged mice.

This data repository contains an excel sheet with animal identification data, body mass changes across experimental timelines, and survival that correspond with behavioral results from Y-maze, open field test, toned-fear conditioning named "CJL Data - Cohort 1" and "CJL Data - Cohort 2". These replicates and datasets were collapsed for analyses in single Graphpad Prism Files "CJL - Survival" including Survival Analyses, and "CJL - Behavioral Data" including body mass, and behavioral datasets. In a separate file includes vascular datasets and excel sheets from resin perfused vascular casted mice included in Figure 6. A separate powerpoint file includes Figures 1-6.
All analyses were conducted using GraphPad Prism 9, and file availability is included in these files sorted into Folders accordingly.
DOI: 10.17632/bgkxcmjcb5
title: Dataset on the Measurement of College Student Entrepreneurship Skills in Indonesia

description: This dataset is used to develop student college entrepreneurship skills instrument. Data analysis was carried out by measuring the quality and practicality of the instrument through various analyzes, namely Content validation using the Aiken V Index, Construct Validity using Exploratory Factor Analysis (EFA) and Confirmatory Factor Analysis (CFA), Reliability using Crobanch's Alpha, and Practicality Testing using measurement instruments.
DOI: 10.17632/hd3kw5tt8f
title: A lightweight histopathologic dataset for image segmentation

description: Despite the limited quantity of gigapixel WSIs available, each contains numerous lesion areas of interest for segmentation. This paradox highlights the rich, yet under-exploited, potential of existing WSI resources for detailed pathological analysis. The method of standardised sliding window simplifies the otherwise cumbersome preprocessing required for each study, significantly reducing the barrier to entry for high-resolution medical image analysis. After a rigorous downsampling and threshold-based region selection operation followed by chromosomal regularisation, our proposed lightweight dataset addresses the problems of tedious preprocessing and optimisation of annotation consistency as well as colour space uniformity. The CAMELYON 16, 17 and ICIAR 2018 datasets provided by the competition organizers are considered as the benchmark, and the Automated Slide Analysis Platform (ASAP) is used for ultra-high resolution image display and manual annotation.
DOI: 10.17632/v4s66hfcsd
title: Data for: Copula Theory and Probabilistic Sensitivity Analysis: Is there a Connection?

description: These files allow one to reproduce Figure 1 in the paper.
DOI: 10.6084/m9.figshare.12666698.v1
title: Malignancy in SARS-CoV2 infection

description: Study population: all the residents in the Veneto Region who were consecutively tested for SARS-CoV-2 infection between February 22nd and April 1st, 2020. Study variables: · demographics (age, sex) · history of malignant disease (prevalent diagnosis of malignant cancer, cancer site, interval between diagnosis of cancer and testing for SARS-CoV-2 infection) · clinical outcomes of SARS-CoV-2 infection (admission to hospital; admission to Intensive Care Unit; death)
DOI: 10.6084/m9.figshare.1494600.v18
title: EcoImpactMapper (outdated version)

description: Please get the newest version from the link below.
DOI: 10.6084/m9.figshare.24488386.v1
title: Assessing the impact of rice varietal mixtures on crop performance in Madagascar

description: Rice is vital for food and livelihoods, but its cultivation can harm the environment and isn't accessible to all farmers. We conducted a study in Madagascar to see how mixing different types of rice in fields and their arrangement affects rice growth.During the 2021-2022 rainy season, we tested four rice types in two different sites with varying soil conditions. We compared plots with pure rice stands to those with mixed rice varieties in different proportions and arrangements. We measured grain and biomass yields, and how well the rice resisted certain pests and diseases.Plant Selection: Four upland rice varieties were chosen for the experiment based on their growing cycle and traits, including resistance to diseases. EARLY MUTANT IAC 165, FOFIFA 152 , FOFIFA 154 , and DOURADO PRECOCE .Plant Management: Both individual stands and mixtures were managed the same way. Seeds were planted in hills, and cattle manure and mineral fertilizers were added at planting. The crops relied on rainwater, and weeding was performed three times during the experiment.Plant Measurements: Throughout the experiment, data on striga infestation, Pyricularia oryzea, and Bacterial Leaf Blight (BLB) were recorded. For Pyricularia oryzea, both disease incidence and severity were assessed. Phenotypic characteristics of each variety were monitored, including vegetative phase duration, flowering time, plant height, and leaf and stem count. Harvesting involved separating grain and vegetative biomass, and dry weights were determined through drying samples.
DOI: 10.6084/m9.figshare.24552790.v1
title: Ancient mitogenomes from Pre-Pottery Neolithic Central Anatolia and the effects of a Late Neolithic bottleneck in sheep (<i>Ovis aries</i>)

description: FASTA files containing 629 mitochondrial genomes of:604domestic sheep (<i>Ovis aries</i>)24 Asiatic mouflons (<i>Ovis gmelini</i>)1 Urial (<i>Ovis vignei</i>)The "...not-aligned_GA" file contains the original sequences, while the "_aligned_GA" contains the final alignment. The samples labels are a composite of population label followed by the sample's age and the sample code. They can be matched to Supplementary Table S5 of the associated paper (in the title).Sandoval-Castellanos E, et al. Science Advances (hopefully).<br>
DOI: 10.6084/m9.figshare.7609988.v1
title: Nicotiana flower morphology photographs

description: Photographs of Nicotiana flowers, both front view and dissected corolla tube. There are five replicate photographs of each flower (denoted by ph1-5 at end of file name).<br>
DOI: 10.17632/5w9wp9wwf5
title: Factors influencing Generation Z's green purchase intentions toward packaged non-alcoholic beverages

description: The data collection process was carried out from December 2024 to April 2025 using a structured questionnaire, yielding 436 valid responses from participants across all 13 provinces and cities of the Mekong Delta of Vietnam. The dataset provides valuable insights into young consumers’ green purchase intention toward packaged non-alcoholic beverages. This is critical information for businesses in the non-alcoholic beverages industry, especially those seeking to develop and implement effective green marketing strategies.