cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/c8z-zfy-b4x
title: Isoetes echinospora Durieu

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/c90-4cl-9e1
title: Betula pendula Roth

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/c90-9m1-2yv
title: Calamagrostis epigejos (L.) Roth

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/c90-cah-x1y
title: Juncus L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/c90-qtl-4yj
title: Persicaria minor (Huds.) Opiz

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/c90-s26-l3v
title: Luzula campestris (L.) DC.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/c90-w0k-tp3
title: Barbarea stricta Andrz.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/c90-wgq-8tr
title: Noccaea caerulescens (J. Presl & C. Presl) F. K. Mey.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/c90-yp4-e6h
title: Juncus articulatus subsp. articulatus

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.15468/dl.ratxn7
title: Occurrence Download

description: A dataset containing 118355968 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1960-1990",
 "Geometry POLYGON((-180 -90,180 -90,180 66.57,-180 66.57,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 118355968 records from 7048 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009291-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/pf56ccrjj6.1
title: 2023 CEJ Adjustment of the ZSM-5 zeolite support towards the efficient hydrogen production by ethanol steam reforming on cobalt catalysts

description: Data related to the article Adjustment of the ZSM-5 zeolite support towards the efficient hydrogen production by ethanol steam reforming on cobalt catalysts, 2023, Chemical Engeenering Journal
https://doi.org/10.1016/j.cej.2023.143239
DOI: 10.17632/zrwf9y8fvd.1
title: Data associated with Nguyen et al ACS Cent Sci 2024 1022

description: Data associated with figures in main text and Supp Info for Nguyen et al, ACS Cent Sci 2024 1022 doi: 10.1021/acscentsci.4c00088
DOI: 10.17632/mk4bs7v9x9.1
title: Water vapor abundances, dust opacities and surface temperatures in the second half of Mars Years 24, 25, 28, 29, 34 in the Southern Polar Region of Mars.

description: This dataset contains data related to the manuscript entitled, “Observations of effects of Global Dust Storms on water vapor in the Southern Polar Region of Mars”, submitted to Journal of Geophysical Research in July of 2023. These data products include: (1) zonal averages of water vapor abundances, dust opacities and surface temperatures from multiple instruments for latitudinal bands between latitudes 40S and 90S for Ls=180-360 for Mars Years (MY) 24, 25, 28, 29 and 34; (2) water vapor abundances, dust opacities and surface temperatures from multiple instruments for latitudes between latitudes 40S and 90S for Ls=180-360 for MY 24, 25, 28, 29 and 34. A detailed description of the datasets can be found in the manuscript.
DOI: 10.15468/dl.krd45p
title: Occurrence Download

description: A dataset containing 1147535 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((30 -5,175 -5,175 70,30 70,30 -5))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Pieridae, Danaidae, Satyridae, Hesperiidae, Riodinidae, Lycaenidae, Nymphalidae, Papilionidae)",
 "Year 1950-2023"
 ]
}

 The dataset includes 1147535 records from 367 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042901-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/8j78n2znjb.1
title: Raw survival data_P.minutus infected_Blue Diode Laser

description: Survival data in days, of the amphipod Gammarus fossarum infected or not with Polymophus minutus (Acanthocephala), following laser treatment aimed at killing the parasite inside its live host (Blue Diode Laser, 1.4W, 3*50 ms or 5*50 ms, after a pre-drilled hole at 0.5W for 100ms)
DOI: 10.17632/5g5scfhmkj.1
title: Rats synchronize predictively to metronomes, Rajendran, et al. 2024

description: Rats were trained to synchronize to metronomes, with a tempo chosen randomly on each trial between 0.5 and 2 Hz. The raw data here are from 8 rats trained on this task. The code included here includes the code to implement the model described in the article, and code to generate the figures. Please see the article for a detailed description of the methods.
DOI: 10.17632/d2b55pmjmk.1
title: Cyclin E/CDK2 and feedback from soluble histone protein regulate the S phase burst of histone biosynthesisCyclin E/CDK2 and feedback from soluble histone protein regulate the S phase burst of histone biosynthesis

description: Faithful DNA replication requires that cells fine-tune their histone pool in coordination with cell-cycle progression. Replication-dependent histone biosynthesis is initiated at a low level upon cell-cycle commitment, followed by a burst at the G1/S transition, but it remains unclear how exactly the cell regulates this change in histone biosynthesis as DNA replication begins. Here, we use single-cell timelapse imaging to elucidate the mechanisms by which cells modulate histone production during different phases of the cell cycle. We find that CDK2-mediated phosphorylation of NPAT at the Restriction Point triggers histone transcription, which results in a burst of histone mRNA precisely at the G1/S phase boundary. Excess soluble histone protein further modulates histone abundance by promoting the degradation of histone mRNA for the duration of S phase. Thus, cells regulate their histone production in strict coordination with cell-cycle progression by two distinct mechanisms acting in concert. Due to size limitations, representative raw images for main text figures have been included with all raw images available upon request.
DOI: 10.17632/dphdhndgwx.1
title: Supplementary data for the manuscript Reproductive cycle of the sand mollusk, Leukoma pectorina (Lamarck, 1818)

description: Raw data (morphometrics data: shell height (mm), shell width (mm), shell length (mm), and weight (g); histological data: sex and maturation stages, and environmental data: temperature and salinity) used in the manuscript "Reproductive cycle of the sand mollusc, Leukoma pectorina (Lamarck, 1818)".
DOI: 10.17632/3pcf9nr849.1
title: Analytical solutions for Vibration of Bi-directional functionally graded nonlocal nanobeams

description: This Data Set creates the solution of the vibration behavior of bi-directional functionally graded nonlocal nano beam.
DOI: 10.17632/ysst99jj5p.1
title: Study on the data of Jianpi Yishentongqiao Granules treating allergic rhinitis based on network pharmacology and molecular docking

description: Allergic rhinitis (AR), also known as allergic rhinitis, is an infectious inflammatory reaction involving allergic reactions and inflammatory factors and immune cells in the body, mainly manifested by nasal congestion, runny nose, and itchy nose. AR is the most common allergic disease in the world, and its incidence has been on the rise in recent years. The number of patients worldwide accounts for about 10%-30% of the total population, which seriously affects the work and life of patients.
Jianpi Yishentongqiao Keli(JPYSTQKL) is the chief physician of the tutor Zhang Changxi engaged in clinical medicine for many years, accumulated a lot of experience in the treatment of AR, the Yupingfeng powder, Cangerzi powder, Erxian decoction added and reduced to cut.JPYSTQKL is composed of Aconitum carmichaelii Debeaux (Fuzi, FZ),Leonurus japonicusHoutt.(Chongweizi,CWZ),ministerial herbs Astragalus mongholicus Bunge (Huangqi, HQ), Epimedium sagittatum (Siebold & Zucc.) Maxim. (Yinyanghuo, YYH), Atractylodes macrocephala Koidz.(Baizhu,BZ),Gynochthodes officinalis (F.C.How) Razafim. & B.Bremer(Bajitian,BJT);the adjuvant herbs Saposhnikovia divaricata (Turcz. ex Ledeb.) Schischk.(Fangfeng,FF),Magnolia denudata Desr.(Xinyi,XY),Tabernaemontana divaricata (L.) R.Br. ex Roem. & Schult(Chantui,
CT),Perilla frutescens (L.) Britton(Zisu,ZS)and the messenger herbs Glycyrrhiza glabra L. (Zhigancao, GC), etc.With the use of cold and heat, warm tonifying and qi, so that the lung, spleen and kidney three viscera harmonization, a total of spleen and qi, tonifying kidney and Yang, wind clearing work. We investigated the possible effects of JPYSTQKL on AR through network pharmacology and in vivo experiments. In this paper, 30 key targets of JPYSTQKL, including JUN, IL6, TNF, AKT1, TP53, IL-1β, IL-4, CXCL8, and CCL2, were recorded through the MAPK signaling pathway, IL-17 signaling pathway, and TNF signaling pathway has therapeutic effect on AR rats.
DOI: 10.17632/7htgr5jhk5.1
title: BioAuxDataset: A dataset of ground-welling nocturnal fauna for object detection and classification

description: BioAuxdataset consists of a directory of 2413 jpg images and their corresponding 2413 xml annotations files. 8 commons ground-dwelling nocturnal fauna are represented: carabid, mouse, opilion, slug, shrew, small-carabid, small-slug, and worm. The dataset is compressed in rar format.
DOI: 10.17632/ky2bdpskpz.2
title: Supporting information for the article “Preliminary characterization of the spectral properties of marennine-like pigments from new Haslea strains”

description: Marennine is a bluish pigment excreted in the seawater by the microalga Haslea Ostrearia. It has interested researchers of different backgrounds such as marine biologists, phytochemists and biochemists because it fixes on the oysters gills and make them green, a phenomenon observed since centuries in the Atlantic French coast near Marenne-Oléron, where the tradition of cultivating oysters is old. Its biological activities have been and are currently studied and many applications are interesting because of its antioxidant, antiangiogenetic and antibacterial activities but also for being a blue natural pigment. During recent sampling campaigns all over the word, new blue diatoms have been discovered and ongoing investigation of genome and frustules appearance are carried out to classify them. A preliminary characterization of the marennine-like pigments that they produce has been carried out, and selected data concerning UV-visible spectrometry, Infrared spectrometry, cyclic voltammetry, elemental composition by Energy-dispersive X-ray spectroscopy (EDX), and proton nuclear magnetic resonance are presented and discussed in the research paper related to this supporting information. Therefore, the data presented in this data paper complete the full paper.
DOI: 10.17632/ky2bdpskpz.3
title: Supporting information for the article “Spectral properties of marennine-like pigments reveal minor differences between blue Haslea species and strains”

description: Marennine is a bluish pigment excreted in the seawater by the microalga Haslea Ostrearia. It has interested researchers of different backgrounds such as marine biologists, phytochemists and biochemists because it fixes on the oysters gills and make them green, a phenomenon observed since centuries in the Atlantic French coast near Marenne-Oléron, where the tradition of cultivating oysters is old. Its biological activities have been and are currently studied and many applications are interesting because of its antioxidant, antiangiogenetic and antibacterial activities but also for being a blue natural pigment. During recent sampling campaigns all over the word, new blue diatoms have been discovered and ongoing investigation of genome and frustules appearance are carried out to classify them. A preliminary characterization of the marennine-like pigments that they produce has been carried out, and selected data concerning UV-visible spectrometry, Infrared spectrometry, cyclic voltammetry, elemental composition by Energy-dispersive X-ray spectroscopy (EDX), and proton nuclear magnetic resonance are presented and discussed in the research paper related to this supporting information. Therefore, the data presented in this data paper complete the full paper.
DOI: 10.17632/ky2bdpskpz.4
title: Supporting information for the article “Spectral properties of marennine-like pigments reveal minor differences between blue Haslea species and strains”

description: Marennine is a bluish pigment excreted in the seawater by the microalga Haslea Ostrearia. It has interested researchers of different backgrounds such as marine biologists, phytochemists and biochemists because it fixes on the oysters gills and make them green, a phenomenon observed since centuries in the Atlantic French coast near Marenne-Oléron, where the tradition of cultivating oysters is old. Its biological activities have been and are currently studied and many applications are interesting because of its antioxidant, antiangiogenetic and antibacterial activities but also for being a blue natural pigment. During recent sampling campaigns all over the word, new blue diatoms have been discovered and ongoing investigation of genome and frustules appearance are carried out to classify them. A preliminary characterization of the marennine-like pigments that they produce has been carried out, and selected data concerning UV-visible spectrometry, Infrared spectrometry, cyclic voltammetry, elemental composition by Energy-dispersive X-ray spectroscopy (EDX), and proton nuclear magnetic resonance are presented and discussed in the research paper related to this supporting information. Therefore, the data presented in this data paper complete the full paper.
DOI: 10.17632/ky2bdpskpz.1
title: Supporting information for the article “Preliminary characterization of the spectral properties of marennine-like pigments from new Haslea strains”

description: Marennine is a bluish pigment excreted in the seawater by the microalga Haslea Ostrearia. It has interested researchers of different backgrounds such as marine biologists, phytochemists and biochemists because it fixes on the oysters gills and make them green, a phenomenon observed since centuries in the Atlantic French coast near Marenne-Oléron, where the tradition of cultivating oysters is old. Its biological activities have been and are currently studied and many applications are interesting because of its antioxidant, antiangiogenetic and antibacterial activities but also for being a blue natural pigment. During recent sampling campaigns all over the word, new blue diatoms have been discovered and ongoing investigation of genome and frustules appearance are carried out to classify them. A preliminary characterization of the marennine-like pigments that they produce has been carried out, and selected data concerning UV-visible spectrometry, Infrared spectrometry, cyclic voltammetry, elemental composition by Energy-dispersive X-ray spectroscopy (EDX), and proton nuclear magnetic resonance are presented and discussed in the research paper related to this supporting information. Therefore, the data presented in this data paper complete the full paper.
DOI: 10.17632/c5ghrxg46t.1
title: Myricetin on Triethylene Glycol Dimethacrylate Induced Matrix-Metalloproteinases Expression in Odontoblast cells Data

description: The following data presents the results obtained from each of the assays conducted in the study titled: Myricetin Modulate Matrix-Metalloproteinases Expression Induced by TEGDMA in human Odontoblast-like Cells. On the first sheet titled "Chromatography," the data corresponds to the evaluation of the presence of test substances in the culture medium, obtained through liquid cromatography coupled with mass spectrometry (LCMS). The second sheet titled "PCR" contains data related to the assessment of mRNA expression for MMP-2 and MMP-9, obtained through real-time polymerase chain reaction (RT-qPCR) from total RNA extracted from odontoblast-like cells exposed to 4-aminophenylmercuric acetate (APMA), hydrogen peroxide (H2O2), proanthocyanidin (PAC), myricetin (MYR), and triethylene glycol dimethacrylate (TEGDMA). On the third sheet titled "ELISA," you will find data regarding the assessment of MMP-2 and MMP-9 concentrations in supernatants from cultures of odontoblast-like cells exposed to Phorbol 12-myristate 13-acetate (PMA), H2O2, PAC, MYR, and TEGDMA. This information was obtained through an Enzyme-Linked Immunosorbent Assay (ELISA). The fourth sheet titled "MMP Activity Data" contains data pertaining to the assessment of MMP-2 and MMP-9 activity in supernatants from cultures of odontoblast-like cells exposed to ethylenediaminetetraacetic acid (EDTA), APMA, H2O2, PAC, MYR, and TEGDMA. This data was obtained through a Fluorescence Resonance Energy Transfer (FRET) assay. The data support the ability of myricetin to transcriptionally control the expression of MMP-2 and MMP-9 induced by contact with TEGDMA in odontoblast-like cells in a cellular model of dentin-odontoblastic cell coculture.
DOI: 10.17632/kwy63t55j7.3
title: The strength of an adhesive contact in the presence of interfacial defects

description: Adhesive contacts which possess a dominant stress concentration, such as at the contact edge in
spherical junctions or at the detachment front in a peeling film, are well studied. More complex
adhesive junction geometries, such as mushroom-shaped fibrils in bioinspired micropatterned
dry adhesives, have exhibited a complex dependence of adhesive strength on the presence of
interfacial defects within the contact. This has led to the emergence of statistical variation
of the local behavior among micropatterned sub-contacts. In order to examine the interplay
between geometry and interfacial defect character in control of the adhesive strength, the model
system of a stiff cylindrical probe on an elastic layer is examined. Both experiments (glass on
PDMS) and cohesive zone finite element simulations are performed, with analytical asymptotic
limits also considered. The thickness of the elastic layer is varied to alter the interfacial stress
distribution, with thinner layers having a reduced edge stress concentration at the expense
of increased stress at the contact center. The size and position of manufactured interfacial
defects is varied. It is observed that for the thickest substrates the edge stress concentration
is dominant, with detachment propagating from this region regardless of the presence of an
interfacial defect within the contact. Only very large center defects, with radius greater than
half of that of the contact influence the adhesive strength. This transition is in agreement
with analytical asymptotic limits. As the substrate is made thinner and the stress distribution
changes, a strong decay in adhesive strength with increasing center defect radius emerges. For
the thinnest substrate the flaw-insensitive upper bound is approached, suggesting that this
decay is dominated by a reduction in the contact area. For penny-shaped defects at increasing
radial positions, the adhesive strength for the thinnest substrates becomes non-monotonic. This
confirms an intricate interplay between the geometry-controlled interfacial stress distribution
and the size and position of interfacial defects in adhesive contacts, which will lead to statistical
variation in strength when defects form due to surface roughness, fabrication imperfections, or
contaminant particles.
DOI: 10.17632/jfdb9zrx3s.1
title: Electroacupuncture Attenuates Chronic Inflammatory Pain And Depression Comorbidity by Inhibiting Hippocampal Neuronal Apoptosis via the PI3K/Akt Signaling Pathway

description: we hypothesized that the potential mechanism of EA for chronic inflammatory pain and depression comorbidity is related to reducing apoptosis of hippocampal neurons by activating the PI3K/Akt signal pathway. Rats received plantar injections of complete Freund’s adjuvant (CFA) on days 0 and 14. They were then divided into groups: sham operation, model, EA, and duloxetine. EA was administered at Hegu (LI4) and Taichong (LR3) from days 15 to 28, while the duloxetine group received duloxetine and distilled water daily (0.1 mg/ml). Pain behavior was assessed using the mechanical withdrawal threshold (MWT) and thermal withdrawal latency (TWL) tests. Depression-like behavior was evaluated through the sucrose preference test (SPT), open-field test (OFT), and forced swim test (FST). Hematoxylin and eosin (HE) staining was employed to assess pathological changes in the hippocampus. Nerve cell apoptosis was determined using TUNEL fluorescence staining. Western blot analysis was conducted to measure the protein expression of Bcl-2, Bax, p-PI3K/PI3K, and p-Akt/Akt. EA demonstrated significant pain intensity reduction and alleviation of pain-related depressive symptoms. Our findings from the HE staining confirmed that CIP induced by CFA led to morphological changes in the hippocampus, while EA effectively reversed these pathological alterations. Moreover, EA intervention remarkably reduced neuronal apoptosis and exhibited an upregulation of Bcl-2 protein expression accompanied by a decrease in Bax expression. Additionally, EA activated the PI3K/Akt signaling pathway. Overall, our study suggests that EA holds the potential to improve pain and depressive behaviors in rats with CIP and depression comorbidity, potentially mediated through the activation of the PI3K/Akt pathway, leading to a reduction in hippocampal neuronal apoptosis.
DOI: 10.17632/8j78n2znjb.2
title: Raw survival data_P.minutus infected_Blue Diode Laser

description: Survival data in days, of the amphipod Gammarus fossarum infected or not with Polymophus minutus (Acanthocephala), following laser treatment aimed at killing the parasite inside its live host (Blue Diode Laser, 1.4W, 3*50 ms or 5*50 ms, after a pre-drilled hole at 0.5W for 100ms)
DOI: 10.17632/zd6x83rnpv.1
title: Global cis-acting element (cres) editing confers Bacillus pumilus LG3145 plant-beneficial functions.Bi Meiying et al.

description: In this project, we conferred dual-plant-benefit properties to a wild-type B. pumilus, which was isolated from intensively cultivated soil, by perturbation of its genome-scale cre-like sequences. This dataset contains sixteen spreadsheets including transcriptomic profiling of 3505 genes and metabolomic data assayed using ultra performance liquid chromatography-mass spectrometry (UPLC-MS) revealed that the mutations of cre-like sequences in LG3145 relieved the CCR effect for most genes, allowing the bacterium to convert rhizodeposits，such as FAs produced by plants, into secondary metabolites, such as pigments, PG, surfactant, bacilysin, and myxochelin B through the pentose phosphate and amino acid metabolism pathways.