cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/5k8fhs3h2n.1
title: Survey Data on Industrial Standards and Firm Performance in Indonesia

description: This data article presents a comprehensive dataset gathered from 276 companies across various sectors, including primary, manufacturing, and services, in Indonesia. The dataset includes the opinions of small, medium, and large-scale companies on the significance of implementing standards in relation to compliance, cost efficiency, customer satisfaction, innovation, quality, and productivity. The survey evaluates the influence of standardization on company performance from three different perspectives, and also collects data on the competitiveness of firms and government programs that aid in implementing standards. Furthermore, the survey identifies the obstacles that companies face in implementing standards, resulting in a total of 17 constructs and 167 variables in the dataset. This dataset can be utilized to understand the challenges related to standard implementation and compliance, assess the impact of industry standards on company performance, identify the advantages of implementing industry standards, gain insight into companies' perceptions, knowledge, and experiences with industry standards, and provide input from companies regarding standards to the government.
DOI: 10.17632/d7shpny8b6.1
title: Background Information about the 26 Cases of Biopiracy and the Edge Lists Describing a Social Network Perspective to Each Case

description: This document is published to supplement the journal article titled "Disclosure of Origin within European Biotechnology Patent Law: A Social Network Perspective" and submitted to the GRUR International: Journal of European and International Intellectual Property Law. The content of this document provides comprehensive data gathered by the author, describing the background and sources of the 26 cases of biopiracy analyzed in that article and introducing a social network perspective by presenting edge list data. The use of any content in this document must be accompanied by a proper citation to that journal article.
DOI: 10.17632/n87z69ms6s.1
title: LDHU3_10.1460

description: RNA-binding protein | Nop15; Leishmania donovani (HU3 strain)
DOI: 10.17632/b5tsksv8xd.1
title: LDHU3_10.1440

description: Nucleoside phosphorylase-like protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/p54n47rbzd.1
title: LINF_340051800

description: RNA-binding protein | DRBD7; Leishmania infantum (strain JPCM5)
DOI: 10.17632/4kyxs33gpm.1
title: LDHU3_10.1380

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/2dmmjhwrfx.1
title: Restored and Created Tidal Marshes Recover Ecosystem Services Over Time

description: Data used for a global meta-analysis of indicators used to track recovery of ecosystem services in restored and created tidal marshes published in Environmental and Sustainability Indicators. Read the full article here: https://doi.org/10.1016/j.indic.2024.100539
DOI: 10.17632/cf86yrfr6y.1
title: Alignment of 262 Echinococcus granulosus sensu stricto nad5 partial sequences

description: Fasta file with the alignment of nad5 mitochondrial gene fragment (670 bp) of E. granulosus sensu stricto. The dataset contains 262 DNA sequences representing all the haplotypes available as of 10 October 2023 (for additional data on the haplotypes see Supplementary Table 3).
DOI: 10.17632/wc9ykt8d9b.1
title: Supplementary Material

description: Abstract
Investigations into the role of vitamin D in the immune response of cattle are limited. The objectives of this study were to investigate the association between circulating vitD concentration, TB vaccination and Mycobacterium bovis (M. bovis) infection outcomes in dairy calves. The study design incorporated two phases: vaccination (week 0-52) and an experimental infection phase (week 52-65). Blood samples were taken throughout weeks 0-65. Twenty-four cattle less than 8 weeks old were housed throughout the study and fed a bodyweight-based allowance. Vaccinated calves (n=12) received a subcutaneous injection of a live-attenuated TB strain at week 0, whereas non-vaccinated ones (n=10) were injected with saline. Both groups were infected with 7,600 CFU of M. bovis (strain 2122/97) 52 weeks post-vaccination. All calves were euthanized in week 66 and their lymph nodes and lungs were assessed for pathology. Serum 25-hydroxyvitamin D (25D) concentrations were measured at intervals using a commercial ELISA with custom bovine standards. A mixed-effects logistic regression model revealed significantly higher 25D concentrations in the vaccinates post-infection (week 65) compared to the non-vaccinates. Linear regression analysis between 25D concentration and the level of M. bovis-driven pathology revealed a negative linear relationship i.e. higher concentrations were associated with lower pathology scores, irrespective of vaccination status. No correlation was detected between interferon-γ cytokine production and vitD concentration. Overall, the results support a significant role for vitamin D in the development of effective immunity of cattle against M. bovis. Gaining insight into this interaction between BCG vaccination, M. bovis infection and vitamin D could potentially guide the optimization of vaccination protocols and TB control strategies going forward.
DOI: 10.17632/wc9ykt8d9b.3
title: Supplementary Material

description: Abstract
Investigations into the role of vitamin D in the immune response of cattle are limited. The objectives of this study were to investigate the association between circulating vitD concentration, TB vaccination and Mycobacterium bovis (M. bovis) infection outcomes in dairy calves. The study design incorporated two phases: vaccination (experimental week 0-52) and experimental infection phase (week 52-65). Twenty-four cattle less than 8 weeks old were housed throughout the study and fed a bodyweight-based allowance. Vaccinated calves (n=12) received a subcutaneous injection of a live-attenuated TB strain at week 0, whereas unvaccinated ones (n=12) were injected with saline. All animals were infected with 7,600 CFU of M. bovis 52 weeks post-vaccination and were euthanized on week 65 when lymph nodes and lungs were removed and assessed for pathology. Blood samples were taken throughout weeks 0-65. Serum 25-hydroxyvitamin D (25D) concentrations were measured at intervals using a commercial ELISA. A mixed-effects linear regression model revealed significantly higher 25D concentrations in the vaccinates post-infection (week 65) compared to the non-vaccinates. Linear regression analysis between 25D concentration and the level of M. bovis-driven pathology revealed a negative linear relationship i.e. higher concentrations were associated with lower pathology scores, irrespective of vaccination status. No correlation was detected between interferon-γ cytokine production and vitD concentration. Overall, the results support a significant role for vitD in the development of effective immunity of cattle against M. bovis. Gaining insight into the interaction between TB vaccination, M. bovis infection and vitD could potentially guide the optimization of vaccination protocols and TB control strategies going forward.
DOI: 10.17632/25k58yt58r.1
title: PROCESSO DE COLETA DE DADOS NA ECOLOGIA INFORMACIONAL COMPLEXA DO MUSEU DA DIVERSIDADE SEXUAL

description: O artigo descreve o processo de coleta de dados no âmbito da ecologia informacional complexa, com um foco específico nos ambientes analógicos do Museu da Diversidade Sexual. Para alcançar esse objetivo, o pesquisador adotou a metodologia da pesquisa etnográfica, que proporcionou uma imersão profunda no contexto do museu. Através de observações detalhadas, conversas informais e entrevista semi- estruturada, o pesquisador buscou capturar a interação dinâmica entre visitantes, funcionários e exposições no museu. As observações detalhadas permitiram uma compreensão abrangente das dinâmicas presentes nos ambientes analógicos do museu, enquanto as conversas informais forneceram contribuição sobre as percepções, experiências e opiniões dos indivíduos envolvidos com o museu. Ao descrever esse processo de coleta de dados, o artigo visa contribuir para uma análise mais aprofundada das questões de diversidade sexual e do papel do museu na sociedade contemporânea, destacando a importância de abordagens metodológicas adequadas para entender a complexidade dos ambientes analógicos como o Museu da Diversidade Sexual.
DOI: 10.17632/f9ddh53y6m.1
title: Investigation of the Role of Micro-RNAs in the Immunopatho-genesis of Oral Lichen Planus Patients

description: Background and Objectives: Lichen planus (LP) is a chronic inflammatory disorder affecting the skin, mucous membranes, and other tissues. Its exact etiology remains elusive, but the immunopathogenesis of LP has gained significant attention due to its complex interplay between immune dysregulation and tissue response. We aim to investigate the importance of understanding LP immunopathogenesis, explicitly focusing on the role of microRNAs (miRNAs) in modulating the disease process. Materials and Methods: In our research, punch biopsy samples were collected from 85 patients, including 52 Oral Lichen Planus (OLP) and 33 healthy volunteer patients, according to specific inclusion and exclusion criteria. Samples were analyzed for miR-21, p53, and p63 expression using real-time Polymerase Chain Reaction (RT/PCR). Results: The OLP group was compared to a control group, revealing increased miR-21 and p53 expression.
Further comparison of the OLP group’s miR-21, p53, and p63 expression showed a weak positive correlation between p53 and miR-21 and a weak negative correlation between p63 and miR-21. These findings suggest that miR-21 and its potential targets, p53 and p63, play crucial roles in the pathogenesis and malignant potential of OLP. Conclusions: In conclusion, our research suggests that miR-21 and its target genes p53 and p63 are crucial in the molecular pathogenesis and cancerous potential of OLP. This understanding can lead to targeted treatment approaches for this pre-cancerous condition.
DOI: 10.17632/rc68x2gv23.1
title: Metal-organic frameworks for efficient mephedrone detoxification or supervised withdrawal – synthesis, characterisation, and in vivo studies

description: The deposit contains data for the paper "Metal-organic frameworks for efficient mephedrone detoxification or supervised withdrawal – synthesis, characterisation, and in vivo studies" including BET, DFT, MD, FTIR, in vivo, Raman, HPLC, RDA, SEM, TG, XRD, UV-VIS and supporting movies.
DOI: 10.17632/x5v656gcwx.1
title: LINF_220018000

description: Gamma-glutamylcyclotransferase | ChaC2b; Leishmania infantum (strain JPCM5)
DOI: 10.17632/7nbkkskft3.1
title: LINF_020005500

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/xk8zth3b8b.1
title: LINF_020006300

description: SF3A2 domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/k7mghgmxw3.1
title: Evaluation of the physical vulnerability of the infrastructure using the concept of emergy.

description: The data of a methodology carried out for the Combeima river basin in Colombia (South America) is presented, in which the effect of the evolution of land use on the flood regime and physical vulnerability in the period 1976- 2017 through hydrological and hydraulic modeling and the implementation of a method for the evaluation of vulnerability to floods. This allowed confirming reports related to the statement that changes in land use produce effects on the behavior of direct runoff in watersheds and its relationship with the vulnerability of structures near surface watercourses. The research work focused on: i) evaluating the effect of changes in land use on physical vulnerability in the flood regime; ii) propose the evaluation of physical vulnerability based on the variation of soil properties through the concept of emergy. The results indicate that the incorporation of variables related to soil and the hydraulic properties of rivers improve the evaluation of vulnerability in land use change scenarios, so this approach could be useful for planners in decision-making processes.
DOI: 10.17632/smpzjpdzwr.1
title: Unveiling School Safety: Insights from COVID-19 and School Datasets in Surabaya City, Indonesia

description: Our dataset comprises two distinct sets of information: one detailing the distribution of COVID-19 cases across 154 sub-areas in Surabaya City, Indonesia, spanning from March 2020 to the end of October 2022, and the other containing school data for each sub-area. The COVID-19 dataset, originally consisting of 146,299 data rows, underwent a pre-processing phase to eliminate erroneous data, resulting in a clean dataset with 146,288 data rows. Simultaneously, the school dataset encompasses information from 1,466 schools. The processing of these datasets is instrumental in gauging the COVID-19 case ratio in each sub-area, facilitating accurate predictions for school openings during the pandemic. This dataset is subjected to several algorithms employing deep learning based on an artificial intelligence approach, with 70% of the data allocated for training and 30% for data testing. Moreover, by engaging in hyperparameter tuning, the prediction model based on a deep neural network is responsible for examining the data and determining appropriate decisions. Hyperparameter tuning generates an optimal prediction model that minimizes the loss function on independent data, mainly when dealing with extensive datasets. Subsequently, the information about predicted COVID-19 spread is presented in a dashboard system, streamlining monitoring and serving as a tool for schools to determine the optimal time for reopening—emphasizing a minimum case ratio, indicative of low virus transmission and safety. Our extensive dataset, optimized with deep learning algorithms and real-time dashboard visualization, can benefit various stakeholders beyond education in future severe outbreaks.
DOI: 10.17632/t3zw4vhdc5.1
title: LINF_220022700

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.jts28h
title: Occurrence Download

description: A dataset containing 78629 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Nymphicus hollandicus (Kerr, 1792))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 78629 records from 132 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000266-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/z34fks5sr2.1
title: Functional annotation of a candidate Ascochyta blight resistance region in chickpea.

description: Ascochyta blight is one of the most devastating diseases in chickpea, causing huge yield losses if the conditions are optimal for the development of the fungal pathogen. Two recombinant inbred line (RIL) populations segregating for Ascochyta blight resistance were developed. RIP8 came from the cross between ILC3279 (resistant) x WR315 (susceptible), while RIP10 was derived from the cross JG62 (susceptible) x ILC72 (resistant). Both populations were sequenced and aligned to the reference genome in NCBI (ASM33114v1) for the obtention of single nucleotide polymorphisms (SNPs). A direct marker-trait association revealed a region in chromosome 4 (3.52-8.20 Mb) which was associated with Ascochyta blight resistance in both populations. The dataset presented shows the functional annotation of all the genes located within this region in all the GO categories (Biological Process, Cellular Component, Molecular Function). The annotation of the region revealed 30 candidate genes for resistance which have to be further studied , and furthermore, one candidate gene with a SNP within its sequence. The dataset has five columns: Column number 1 provides the sequence ID in NCBI; Column 2 specifies the number of GO terms that were assigned to the sequence; Column 3 shows the GO ID assigned to the sequence; Column 4 gives further information about the function of the gene; and Column 5 groups the assigned GO terms in the three GO categories listed above. These data can be used if a gene within this region is associated with another agronomic trait of interest, or to further analyse the function of the annotated genes
DOI: 10.17632/fgpv739dd2.1
title: Replication Package for "The Role of Immigrants in the United States Labor Market and Chinese Import Competition"

description: The replication folder contains all codes and data needed to replicate the empirical results in "The Role of Immigrants in the United States Labor
Market and Chinese Import Competition"
DOI: 10.17632/sdxjd9ntjz.1
title: Appendices. Research protocols for analysing community forestry

description: A. Institutional Design Principles in San Lucas Mountains.
B1. Participatory mapping guidelines and maps.
B2. Community forestry individual interview.
B3. Focus group protocol.
B4. Questionnaires for group interviews (institutional design principles, conservation effectiveness, empowering interactions with external organisations, sustainable values and practices).
B5. Legitimate environmental leadership and conservation effectiveness (individual questionnaire).
B6. Vignettes guidelines.
B7. Interpretation and analysis protocol.
B8. fsQCA Minimization in R methodological description and results.
B9. Scripts of codes for R Studio.
B10. Products for the social appropriation of knowledge.
B11. Preventive protocol for the sustainable use of the Serranía de San Lucas. San Lucas: living territory [In Spanish].
DOI: 10.17632/xs9v6fbkgp.1
title: LINF_230005900

description: DUF1767 domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/btfy2ck2gw.1
title: LDHU3_16.0330

description: Alpha/beta hydrolase domain-containing protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/4tykmn5gyp.3
title: Genomics dataset of marine isolate Streptomyces griseoincarnatus strain R-35

description: Analyses outputs from various bioinformatics analysis tools for the description of core genome metrics and secondary metabolite annotations for the draft genome from Streptomyces griseoincarnatus strain R-35.
DOI: 10.17632/4tykmn5gyp.1
title: Genomics dataset on marine isolate Streptomyces griseoincarnatus strain R-35

description: Analyses outputs from various bioinformatics analysis tools for the description of core genome metrics and secondary metabolite annotations for the draft genome from Streptomyces griseoincarnatus strain R-35.
DOI: 10.17632/4tykmn5gyp.2
title: Genomics dataset on marine isolate Streptomyces griseoincarnatus strain R-35

description: Analyses outputs from various bioinformatics analysis tools for the description of core genome metrics and secondary metabolite annotations for the draft genome from Streptomyces griseoincarnatus strain R-35.
DOI: 10.17632/2twz5ntffg.1
title: Hydrodata

description: hydrological and hydrochemical data for surface waters from Forest and Agricultural catchments.
Research_data_1: Precipitation and specific water runoff totals in both subcatchments in hydrological year 2017/2018.
Research_data_2:Precipitation and specific water runoff in both subcatchments in hydrological year 2017/2018 - 11/2017.
Research_data_3: Hydrochemical data for the hydrological year 2017/2018.
Research_data_4: Hydrochemical data for the short rainfall event on June 12 to 17; 2018.
Research_data_5: Hydrochemical data for years 2001-2022.
DOI: 10.17632/t4gw54s8k3.1
title: Multi-omics analysis reveals altered gut microbiota and metabolites modulate plasma cytokines during pregnancy

description: The STORMS checklist
DOI: 10.17632/hdr552z67z.1
title: LDHU3_18.0630

description: Aconitase; Leishmania donovani (HU3 strain)
DOI: 10.17632/4fr8x2ckb3.1
title: LDHU3_16.0410

description: KREPB8; Leishmania donovani (HU3 strain)
DOI: 10.17632/chd25zzcfv.1
title: LDHU3_18.0590

description: Paralyzed flagella protein 20 | PF20; Leishmania donovani (HU3 strain)
DOI: 10.17632/sn2ysgf4sf.1
title: LINF_360032600

description: small nuclear RNA-activating protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/4z3hcvd66g.1
title: LINF_360033700

description: membrane-bound acid phosphatase 2
Leishmania infantum (strain JPCM5)
DOI: 10.17632/s22xpssf7v.1
title: LINF_230023600

description: Palmitoyltransferase; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.faacma
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-76.02612 -17.98362,-69.21938 -17.98362,-69.21938 -14.44717,-76.02612 -14.44717,-76.02612 -17.98362))",
 "HasGeospatialIssue is false",
 "TaxonKey is Phaethon aethereus Linnaeus, 1758",
 "Year 2021-2025"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000269-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/zv7y78twd9.2
title: Pressure measurements from internal/confined blast loading using C-4 charges

description: This dataset contains pressure recordings (raw data) from detonations of spherical C-4 charges inside a confined space provided by rigid steel cylinders with pressure sensors (Kulite HKS-375 (M) pressure sensors). 

Two different internal diameters were used for the rigid steel cylinders, 400 mm and 200 mm. A single test series was performed using the 400 mm cylinder, using charge sizes 50 g, 65 g, 75 g, 100 g, 150 g, 200 g, 300 g, 400 g, 500 g of C-4 with two repetitions of each. Two test series were performed on the 200 mm cylinder; 1) a series of four identical tests detonating 20 g C-4 to test repeatability, and 2) a series with charge sizes 10 g, 16 g, 20 g and 25 g with two repetitions of each, which also included additional external pressure sensors and a high-speed camera for shadowgraphy imaging. All listed charge sizes are without the detonator, which adds an equivalent of approximately 2 g to the charge. 

The dataset is divided by the steel cylinder diameter and then by test series (for the 200 mm cylinder). Included in each folder is a PDF with a sketch of the experimental setup and the positions of the pressure sensors with respect to the charge. 

A journal article presenting the results has been published in the journal "Shock Waves", and the article PDF has been added to the dataset. The article DOI link is https://doi.org/10.1007/s00193-024-01161-w and the article is open access.
DOI: 10.17632/nd4s9z7jgk.1
title: LINF_230016200

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/5x5kzm5pgc.1
title: LINF_250020900

description: UstE-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/fzvs536bpy.1
title: LINF_360035000

description: metallo-peptidase - Clan MA(E) Family M41
Leishmania infantum (strain JPCM5)
DOI: 10.17632/pr3nd4dbg9.1
title: LINF_240026100

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/kn9f4jwmpb.1
title: LINF_360034100

description: protein kinase
Leishmania infantum (strain JPCM5)