cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3611684_d6.v1
title: Additional file 3: of Interaction network of tobacco etch potyvirus NIa protein with the host proteome during infection

description: Refined lists of A. thaliana single genes targeted by TEV VPg and NIaPro domains of NIa during infection, respectively. Note that 67 elements are common to both lists (full-length NIa targets). The file also contains the list of the gene ontology (GO) terms significantly over-represented in the global list of NIa targets. (XLSX 95 kb)
DOI: 10.6084/m9.figshare.c.3611678_d9.v1
title: Additional file 9: of Polygenic sex determination in the cichlid fish Astatotilapia burtoni

description: Primer sequence and scaffold location for SSR markers used. (XLSX 35 kb)
DOI: 10.17863/cam.108071
title: Research data supporting "Light management by algal aggregates in living photosynthetic hydrogels"

description: The dataset contains the raw data for the plots in the figures, in the formats of Excel sheet and Matlab datasheet. The experimental spectra were measured using the integrating sphere while the simulated plots were generated from the Monte Carlo programme (mcxyz). The Matlab scripts for performing the simulation and generating the output files were included in the folder named "Scripts".
DOI: 10.17863/cam.97032
title: Research data supporting "Mesitylated trityl radicals, a platform for doublet emission: symmetry breaking, charge-transfer states and conjugated polymers"

description: Compressed (.zip) folder containing data from normalized photoluminescence spectra of M3TTM and M2TTM-3PCz radicals and PFMTTM polyradical in 0.1 mM toluene solutions (Fig1c.xlsx); normalized steady-state emission spectra of MxTTM radicals in 0.1 mM toluene solutions (Fig3a.xlsx) and emission kinetics in the 580-610 nm region showing rapid emission following 520 nm excitation (Fig3b.xlsx); normalized steady-state emission spectra of MxTTM radicals in 8 wt% evaporated films in CBP showing increasing emission red-shift and linewidth broadening with decreasing mesitylation (Fig.3c.xlsx) and total emission kinetics in the range of 550-880 nm following 520 nm excitation using 100 fs pulses with fluence 5 μJ cm-2 (Fig3d.xlsx), inset shows early time kinetics (Fig3dInset.xlsx); time-gated photoluminescence spectra of 8 wt% M2TTM radical in CBP film showing monomer emission at nanosecond times and exciplex emission at microsecond times (Fig3e.xlsx); dynamics of emission of MxTTM radicals in CBP films showing time dependence of peak emission wavelength (Fig3f1.xlsx) and integrated photoluminescence counts in the range of 550-880 nm (Fig3f2.xlsx); external quantum efficiency versus current density (Fig4b.xlsx) and current density-voltage-luminance characteristics of organic light-emitting diodes with M2TTM-3PCz radical as the emitter (Fig4c.xlsx); normalized photoluminescence spectrum of the light-emitting layer of 5 wt% M2TTM-3PCz doped CBP film following 405 nm excitation and normalized electroluminescence spectrum of the device at 0.2 mA cm-2 (Fig4d.xlsx); computational atomic coordinates of optimized MxTTM structures in the ground and excited states calculated at the UB3LYP(D3)/def2-SVP and UCAM-B3LYP(D3)/def2-SVP levels of theory, respectively (MxTTM_coordinates.docx).
DOI: 10.6084/m9.figshare.c.3611738_d1.v1
title: Additional file 1: of Clustering of disulfide-rich peptides provides scaffolds for hit discovery by phage display: application to interleukin-23

description: Contains six supplemental tables in separate tabs of a Microsoft Excel Workbook. Legends for each table are included in the â  Table Summaryâ   tab of this file. (XLSX 106 kb)
DOI: 10.6084/m9.figshare.c.3611954_d1.v1
title: Additional file 1: of Methamphetamine abuse affects gene expression in brain-derived microglia of SIV-infected macaques to enhance inflammation and promote virus targets

description: Complete list of genes upregulated in microglia isolated from Meth-treated animals compared to controls. Genes in this list are increased above 1.5-fold in Meth versus control, with a p value below 0.05. (XLSX 167 kb)
DOI: 10.6084/m9.figshare.c.3611954_d2.v1
title: Additional file 3: of Methamphetamine abuse affects gene expression in brain-derived microglia of SIV-infected macaques to enhance inflammation and promote virus targets

description: Complete list of genes upregulated in microglia isolated from animals that are SIV-infected and Meth-treated compared to SIV-infected animals. Genes in this list are increased above 1.5-fold in MethSIV versus SIV, with a p value below 0.05. (XLSX 69 kb)
DOI: 10.6084/m9.figshare.c.3611954_d3.v1
title: Additional file 2: of Methamphetamine abuse affects gene expression in brain-derived microglia of SIV-infected macaques to enhance inflammation and promote virus targets

description: Complete list of genes upregulated in microglia isolated from SIV-infected animals compared to controls. Genes in this list are increased above 1.5-fold in SIV versus control, with a p value below 0.05. (XLSX 306 kb)
DOI: 10.17863/cam.12852
title: Research Data Supporting Fragment screening against the EthR-DNA interaction by native mass spectrometry

description: Research Data Supporting Fragment screening against the EthR-DNA interaction by native mass spectrometry. Contains raw data for thermal shift (TS), surface plasmon resonance (SPR) and native MS (nMS) results
DOI: 10.6084/m9.figshare.c.3611984_d3.v1
title: Additional file 3: of A first-line diagnostic assay for limb-girdle muscular dystrophy and other myopathies

description: Amplicon details and primer sequences for the neurological panel. (XLSX 1256 kb)
DOI: 10.6084/m9.figshare.c.3612005_d1.v1
title: Additional file 2: of Genome-wide placental DNA methylation analysis of severely growth-discordant monochorionic twins reveals novel epigenetic targets for intrauterine growth restriction

description: Supplementary Tables S3â  S5. (XLSX 86Â kb)
DOI: 10.6084/m9.figshare.c.3612239_d1.v1
title: MOESM4 of Parameter set for computer-assisted texture analysis of fetal brain

description: Additional file 4: Dataset 4. Data for supplemental trial runs: 36 × 1.5 T; 36 × 3 T; group 1: 20–28 weeks; group 2: 29–40 weeks.
DOI: 10.6084/m9.figshare.c.3612239_d2.v1
title: MOESM3 of Parameter set for computer-assisted texture analysis of fetal brain

description: Additional file 3: Dataset 3. Raw texture analysis/Fisher coefficient: ➤ appendix 1, ➤ appendix 2, ➤ appendix 3.
DOI: 10.6084/m9.figshare.c.3612245_d2.v1
title: Additional file 4: of OncodriveFML: a general framework to identify coding and non-coding regions with cancer driver mutations

description: An Excel file containing information on lncRNAs probed for FM bias. The first sheet contains a README file with details on the contents of the other two sheets. The second sheet contains the list of all lncRNAs probed, a summary of their biological function, and the original source from which we extracted them. The third sheet contains the FM bias p value computed for each significantly FM biased lncRNA in each cohort. (ODS 13 kb)
DOI: 10.6084/m9.figshare.c.3612239_d3.v1
title: MOESM2 of Parameter set for computer-assisted texture analysis of fetal brain

description: Additional file 2: Dataset 2. Effects of pull-down conversion: 12/16-bits grayscale DICOM to 8-bit BMP (RGB-24).
DOI: 10.6084/m9.figshare.c.3612239_d4.v1
title: MOESM5 of Parameter set for computer-assisted texture analysis of fetal brain

description: Additional file 5. MaZda Package v5 RC HG (release candidate: Hugues Gentillon): this pre-release (beta) version contains: 1) MaZda version 5 for achromatic and chromatic image analysis, 3D editing, feature extraction & selection, geometrical features for ROIs; 2) B11 version 3.3 for feature clustering, image segmentation, unsupervised & supervised classification.
DOI: 10.6084/m9.figshare.c.3612245_d3.v1
title: Additional file 3: of OncodriveFML: a general framework to identify coding and non-coding regions with cancer driver mutations

description: An Excel file containing all significantly FM biased genomic elements, both coding and non-coding detected across all mutational datasets analyzed. The file is organized in tabs each corresponding to the results in one dataset. (ODS 57 kb)
DOI: 10.6084/m9.figshare.c.3612245_d4.v1
title: Additional file 1: of OncodriveFML: a general framework to identify coding and non-coding regions with cancer driver mutations

description: An Excel file with a description of all datasets of mutations used to test the performance of OncodriveFML in the detection of putative driver genomic elements. Each tab in the file contains the description of a separate dataset, with the first tab serving as a README. (ODS 14 kb)
DOI: 10.6084/m9.figshare.c.3612239_d5.v1
title: MOESM1 of Parameter set for computer-assisted texture analysis of fetal brain

description: Additional file 1: Dataset 1. Figure 8 data: stored bits in 1.5/3 T DICOM/BMP, measured with MaZda version 5.
DOI: 10.17863/cam.55683
title: Metabolic imaging detects resistance to PI3K alpha inhibition mediated by persistent FOXM1 expression in ER+ breast cancer _ Raw data

description: 1. Main and supplementary raw data. Zip folder with 7 Excel files containing the raw measurements of main FILE 1 figures 1 (1A,!b,1C,1D,1F,1G,1H,1I), FILE 2 figure 2 (2A,2B,2D,2E,2F), FILE 3 figure 3 (3A,3B,3C,3D,3E,3F,3G), FILE 4 figure4 (4A,4B,4C,4D,4E,4F,4G,4H,4I,4J), FILE 5 figure 6 (6A,6B,6C,6D,6E,6H,6I), FILE 6 figure 7 (7B,7C,7D,7E,7F,7G,7H,7I,7J) and FILE 6 supplementary raw data (Supplementary 1A,1C,2A,2C,2D,2E,2F,2G,3A,3C,3D,3E,3F,3G,4A,4B,4C,4E,4G,5D,5E) 2. Raw CT and PET data. Zip folder containing the raw DICOM data for the in vivo 18FFDGPET uptake and associated CT experiments. 3. Raw MRI data. Zip folder containing the raw DICOM data for the in vivo 1-13C hyperpolarized pyruvate - MRI experiments. 4. Raw Western Blot data. Folder containing the original blots pasted on pdf for figures 1, 2, 3, 4 (in 3 docs 4I, 4II, 4III), 6 and 7; and supplementary figures S2,S3,S4 and S5. See the main manuscript for more details (Open access).
DOI: 10.6084/m9.figshare.c.3612518_d2.v1
title: Additional file 2: Figure S1. of Population whole-genome bisulfite sequencing across two tissues highlights the environment as the principal source of human methylome variation

description: Number of detected CpG-sites per mean genome coverage. Figure S2. Overall CpG-site methylation levels. Figure S3. DNA methylation footprint in adipose tissue and blood. Figure S4. Invariable CpG tissue distribution and genomic feature association. Figure S5. Invariable CpG tissue distribution and genomic feature association for sites detected in â Ľ5 individuals. Figure S6. Invariable CpG tissue distribution and genomic feature association for sites detected in â Ľ10 individuals. Figure S7. Differential methylation level distribution. Figure S8. Genomic feature association of pDMCs. Figure S9. Genomic feature association of pDMRs. Figure S10. Genome feature association of DMCs of genetic vs. environmental origin. Figure S11. Proportion of eDMCs on total DMCs and eDMC genomic feature association. Figure S12. CpH methylation within sequence context. Figure S13. Overlap of methylation data with Encode blacklisted regions. Figure S14. CpG-site annotation scheme. Figure S15. pDMR definition. Additional Figure legends. (ZIP 1855 kb)
DOI: 10.6084/m9.figshare.c.3612509_d6.v1
title: Additional file 7: Figure S6. of Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies

description: A. False positive rate distributions for datasets A1s–A3s and A1m–A3m. Violin plot of distributions of false positive rate (FPR) in 150 iterations for datasets A1s–A3s and A1m–A3m (vertical panels), analyzed with all differential relative abundance methods (horizontal panels). FPR is defined as the fraction of OTUs with p
DOI: 10.6084/m9.figshare.c.3612533_d1.v1
title: Additional file 1 of Plasma tenofovir trough concentrations are associated with renal dysfunction in Japanese patients with HIV infection: a retrospective cohort study

description: Data regarding the 11 patients. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3612509_d8.v1
title: Additional file 1: Table S1. of Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies

description: Overview of the datasets used in the study. Sampling and data characteristics of the seven datasets used in the study, A1â  A4 for the false positive rate and spike-in retrieval tests and B1â  B3 for the beta-diversity optimization tests. (XLSX 5 kb)
DOI: 10.23668/psycharchives.4638
title: COVID-19 Snapshot Monitoring (COSMO Germany) - Wave 36

description: In a crisis such as the current outbreak of the newly emerged coronavirus, it is of utmost importance to monitor public perceptions of risk, protective and preparedness behaviours, public trust, as well as knowledge and misinformation to enable government spokespeople, the media, and health organizations to implement adequate responses (WHO Europe, 2017; World Health Organization, 2017). The purpose of this serial cross-sectional study COSMO is to allow rapid and adaptive monitoring of these variables over time and to assess the relations between risk perceptions, knowledge and misinformation to preparedness and protective behaviour regarding COVID-19 in Germany.
DOI: 10.23668/psycharchives.4639
title: COVID-19 Snapshot Monitoring (COSMO Germany) - Wave 37

description: In a crisis such as the current outbreak of the newly emerged coronavirus, it is of utmost importance to monitor public perceptions of risk, protective and preparedness behaviours, public trust, as well as knowledge and misinformation to enable government spokespeople, the media, and health organizations to implement adequate responses (WHO Europe, 2017; World Health Organization, 2017). The purpose of this serial cross-sectional study COSMO is to allow rapid and adaptive monitoring of these variables over time and to assess the relations between risk perceptions, knowledge and misinformation to preparedness and protective behaviour regarding COVID-19 in Germany.
DOI: 10.17863/cam.49542
title: Hyperspectral Colour Classification (HCC)

description: Dataset utilised for the training and testing of the spectral classification system for a line-scanning hyperspectral endoscope and the associated core algorithms. See the Readme file for a detailed description.
DOI: 10.6084/m9.figshare.c.3612761_d2.v1
title: Additional file 4: of Level of nutrition knowledge and its association with fat consumption among college students

description: Copy of Regression and Correlation Analysis (CSV 996 bytes)
DOI: 10.6084/m9.figshare.c.3612761_d3.v1
title: Additional file 3: of Level of nutrition knowledge and its association with fat consumption among college students

description: A copy of the raw data file. (CSV 157Â kb)
DOI: 10.6084/m9.figshare.c.3612776_d1.v1
title: Additional file 2 of CNARA: reliability assessment for genomic copy number profiles

description: Supplementary Table S1. A complete list of the 1522 copy number profiles, including GEO accession number and reliability label. (TSV 58 kb)
DOI: 10.6084/m9.figshare.c.3612773_d1.v1
title: Additional file 1: Table S1. of Assessing the reproducibility of exome copy number variations predictions

description: Lists all the IDs used in this study. Table S2 gives details of independent dataset analysis. Tables S3 and S4 give details of size and capture analyses. Table S5 lists ClinSeqÂŽ CNVs identified from SNP chips used in this study. Table S6 lists the summary of CNV sizes for 300 ClinSeq run at base pair and exon resolution. Table S7 lists SNP array CNV calls used for 300 ClinSeq samples. (XLSX 57 kb)
DOI: 10.6084/m9.figshare.c.3612761_d4.v2
title: Additional file 2: of Level of nutrition knowledge and its association with fat consumption among college students

description: A copy of the studyâ  s questionnaire. (XML 412Â kb)
DOI: 10.6084/m9.figshare.c.3612761_d4.v1
title: Additional file 2: of Level of nutrition knowledge and its association with fat consumption among college students

description: A copy of the studyâ  s questionnaire. (XML 412Â kb)
DOI: 10.6084/m9.figshare.c.3612761_d5.v1
title: Additional file 1: of Level of nutrition knowledge and its association with fat consumption among college students

description: Consent Form. A sample of the consent form that was given to participants in this study. (TXT 5Â kb)
DOI: 10.17863/cam.62758
title: Research data supporting "Microstructural degradation of the AlMo0.5NbTa0.5TiZr refractory metal high entropy superalloy at elevated temperatures"

description: Data corresponding to the figures and tables in the associated paper. Data includes BSE SEM images, SEM EDX elemental distribution maps, SEM EDX quantitative measurements, and X-ray diffraction data.
DOI: 10.6084/m9.figshare.c.3612797_d1.v1
title: Additional file 1: of Endocrine disruptors alter social behaviors and indirectly influence social hierarchies via changes in body weight

description: Performance in sociability test of male mouse offspring exposed perinatally to different plastic additives. Test was done on postnatal week 10. Excel spreadsheet with data (mean, SE, FDR corrected p-value) on behavior parameters, readouts of sociability test, performed on postnatal week 10 with male mice offspring exposed perinatally to one of 4 testing conditions (vehicle only, BDE-47, TBBPA, BPS). (XLSX 17 kb)
DOI: 10.15468/dl.72dwte
title: Occurrence Download

description: A dataset containing 345 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Dermaptera"
 ]
}

 The dataset includes 345 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037794-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.7286
title: Research data supporting 'Controlling and assessing the quality if aerosol jet printed features for large area and flexible electronics'

description: This dataset contains the raw resistance data collected from the printed samples. The raw SEM images and profilometer data used for the line width analysis are included, as well as the MATLAB code used to perform the analysis.
DOI: 10.6084/m9.figshare.c.3612941_d1.v1
title: Additional file 1: of Heterosexual transmission of HIV in the Dominican Republic: gendered indicators are associated with disparities in condom use

description: Tables for nested logistic models. The additional file 1 is an Excel document which contains three separate sheets, each one with a different table that displays the results of the nested analyses for condom use: Table S5 displays the nested logistic models for condom use among all Dominicans age 15 to 45Â years in the sample. Table S6 displays the disaggregated nested logistic models for condom use by men. Table S5 displays the disaggregated nested logistic models for condom use by women. (XLSX 37Â kb)
DOI: 10.17863/cam.9899
title: Research data supporting "A Novel Pre-sintering method for Growing Y-Ba-Cu-O Superconducting Single Grains from Raw Oxides"

description: The raw data is extracted from XRD, trapped fields setup and levitation force measurement facilities. Data is all plotted in Origin.
DOI: 10.6084/m9.figshare.c.3612950_d3.v1
title: MOESM4 of Does the social equitability of community and incentive based conservation interventions in non-OECD countries, affect human well-being? A systematic review protocol

description: Additional file 4. Code Index. Index of Codes to be used for full-text review.
DOI: 10.17863/cam.54060
title: Raw data for Understanding how the rate of C-H bond cleavage affects formate oxidation catalysis by a Mo-dependent formate dehydrogenase

description: Raw data for publication (xls file). See 'description.doc' for a description of the contents of each Excel file.
DOI: 10.15468/dl.jexdf7
title: Occurrence Download

description: A dataset containing 2576 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-5000.0",
 "Country is one of (Spain, Portugal)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (April, May, June, July)",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (ada19a05-4216-44c7-aa4f-6e7177bcb0ac, 28eb1a3f-1c15-4a95-931a-4af90ecb574d, c8d737e0-2ff8-42e8-b8fc-6b805d26fc5f)",
 "TaxonKey is Sturnus vulgaris Linnaeus, 1758",
 "Year 2000-2024"
 ]
}

 The dataset includes 2576 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037795-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3612992_d12.v1
title: Additional file 23: of Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L.)

description: Summary of variations identified in the â   QTL-hotspot â   region reported by Varshney et al. [6, 8]. (XLSX 91Â kb)
DOI: 10.6084/m9.figshare.c.3612992_d15.v1
title: Additional file 8: of Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L.)

description: Summary of Indel ratio among 35 chickpea genotypes re-sequenced. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3612992_d16.v1
title: Additional file 9: of Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L.)

description: Gene duplications observed in 35 chickpea genotypes. (XLSX 2979Â kb)
DOI: 10.6084/m9.figshare.c.3613040_d1.v1
title: Additional file 1: of The using of a piglets as a model for evaluating the dipyrone hematological effects

description: Numerical raw data. (XLSX 20Â kb)
DOI: 10.6084/m9.figshare.c.3612992_d17.v1
title: Additional file 20: of Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L.)

description: Classification of homozygous SNPs using SNPEff program in 35 chickpea genotypes. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3612992_d19.v1
title: Additional file 14: of Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L.)

description: Summary of line specific variations in coding region identified in each chickpeaÂ genotype. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3613058_d2.v1
title: Additional file 1: of SWIFT-Review: a text-mining workbench for systematic review

description: OHAT datasets. (XLSX 4022 kb)
DOI: 10.15468/dl.ktgjyg
title: Occurrence Download

description: A dataset containing 14555 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Araneae"
 ]
}

 The dataset includes 14555 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037796-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3612992_d20.v1
title: Additional file 19: of Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L.)

description: Classification of heterozygous SNPs using SNPEff program in 35 chickpea genotypes. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3613058_d4.v1
title: Additional file 4: of SWIFT-Review: a text-mining workbench for systematic review

description: Tox21 chemical names and synonyms. (XLSX 3996 kb)
DOI: 10.17863/cam.25934
title: Research data supporting "Vertical Cavity Biexciton Lasing in 2-Dimensional Dodecylammonium Lead Iodide Perovskites"

description: Origin files underlying Figures in the paper and SI