cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8qzcbd
title: Occurrence Download

description: A dataset containing 7939 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cyanocitta cristata (Linnaeus, 1758)",
 "Year 2011-2018"
 ]
}

 The dataset includes 7939 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0239858-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n8q5we
title: Occurrence Download

description: A dataset containing 373 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Porlieria chilensis I.M.Johnst."
 ]
}

 The dataset includes 373 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0316628-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.86v396
title: Occurrence Download

description: A dataset containing 27410 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coccyzus americanus (Linnaeus, 1758)",
 "HasCoordinate is True",
 "Country is United States of America",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2020",
 "Month is greater than or equal to June",
 "Month is less than or equal to August",
 "DecimalLatitude is greater than or equal to 30",
 "DecimalLatitude is less than or equal to 35",
 "DecimalLongitude is greater than or equal to -89",
 "DecimalLongitude is less than or equal to -75"
 ]
}

 The dataset includes 27410 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0314005-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxv8oc
title: Occurrence Download

description: A dataset containing 600 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Mimosa diplotricha C.Wright ex Sauvalle",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 600 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008535-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83hm2h
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brachystelma richardsii Peckover"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0259747-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s9c2yd
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Prestonia mollis Kunth"
 ]
}

 The dataset includes 80 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0316633-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gnvqyd
title: Occurrence Download

description: A dataset containing 685 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Eleutherodactylus cystignathoides (Cope, 1877)"
 ]
}

 The dataset includes 685 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0306935-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m7dydq
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Schistosoma haematobium (Bilharz, 1852) Weinland, 1858"
 ]
}

 The dataset includes 50 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054383-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xy8nyi
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bulbophyllum oerstedii (Rchb.f.) Hemsl."
 ]
}

 The dataset includes 47 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003140-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5zbpcf
title: Occurrence Download

description: A dataset containing 5922 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada"
 ]
 },
 "Year 1980-2020",
 "TaxonKey is Acer macrophyllum Pursh"
 ]
}

 The dataset includes 5922 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084482-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nzogz3
title: Occurrence Download

description: A dataset containing 1744106 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fagaceae"
 ]
}

 The dataset includes 1744106 records from 1376 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008536-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.11665305
title: MOESM8 of Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)

description: Additional file 8: Table S3. DEGs involved in nicotine biosynthesis and transport after topping.
DOI: 10.6084/m9.figshare.11665305.v1
title: MOESM8 of Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)

description: Additional file 8: Table S3. DEGs involved in nicotine biosynthesis and transport after topping.
DOI: 10.6084/m9.figshare.11665311
title: MOESM9 of Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)

description: Additional file 9: Table S4. Differentially transcribed transcription factors after topping.
DOI: 10.6084/m9.figshare.11665311.v1
title: MOESM9 of Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)

description: Additional file 9: Table S4. Differentially transcribed transcription factors after topping.
DOI: 10.6084/m9.figshare.11665449
title: MOESM2 of A DNA methylation signature to improve survival prediction of gastric cancer

description: Additional file 2: Table S2. A total of 340 methylation related differentially expression genes were screened in gastric cancer patients from TCGA.
DOI: 10.6084/m9.figshare.11665449.v1
title: MOESM2 of A DNA methylation signature to improve survival prediction of gastric cancer

description: Additional file 2: Table S2. A total of 340 methylation related differentially expression genes were screened in gastric cancer patients from TCGA.
DOI: 10.6084/m9.figshare.11665707
title: A dose-response meta-analysis of green tea consumption and breast cancer risk

description: Whether drinking green tea (GT) could reduce the risk of breast cancer (BC) is still controversial. The search was performed using PubMed, Embase and Web of Science databases. The generalised least square method and constrained cubic spline model were performed to assess the dose-response trends between GT consumption and BC risk. The attributable risk proportion (ARP) was also calculated. A total of 16 studies were included and the pooled relative risks was 0.86 (95%CI: 0.75–0.99) for BC risk at the highest vs. lowest levels of GT consumption. GT consumption (<i>p</i><sub>nonlinearity</sub> = .110), drinking GT years (<i>p</i><sub>nonlinearity</sub> = .393) and BC risk were both negatively linearly correlated. Moreover, The ARP results demonstrated in China, people who drink GT do not suffer from BC, 23.5% of which may be attributed to drinking GT. In conclusion, drinking GT may have a positive effect on reducing BC risk, especially in long-term, high doses.
DOI: 10.6084/m9.figshare.11665707.v1
title: A dose-response meta-analysis of green tea consumption and breast cancer risk

description: Whether drinking green tea (GT) could reduce the risk of breast cancer (BC) is still controversial. The search was performed using PubMed, Embase and Web of Science databases. The generalised least square method and constrained cubic spline model were performed to assess the dose-response trends between GT consumption and BC risk. The attributable risk proportion (ARP) was also calculated. A total of 16 studies were included and the pooled relative risks was 0.86 (95%CI: 0.75–0.99) for BC risk at the highest vs. lowest levels of GT consumption. GT consumption (<i>p</i><sub>nonlinearity</sub> = .110), drinking GT years (<i>p</i><sub>nonlinearity</sub> = .393) and BC risk were both negatively linearly correlated. Moreover, The ARP results demonstrated in China, people who drink GT do not suffer from BC, 23.5% of which may be attributed to drinking GT. In conclusion, drinking GT may have a positive effect on reducing BC risk, especially in long-term, high doses.
DOI: 10.6084/m9.figshare.22151855
title: Geodatabase of inter-basin surface water transfers for public water supplies in the conterminous United States, 1986-2015

description: Geodatabase contains tabular and spatial inter-basin transfer data plus certain tools for using the data.
DOI: 10.6084/m9.figshare.22151855.v1
title: Geodatabase of inter-basin surface water transfers for public water supplies in the conterminous United States, 1986-2015

description: Geodatabase contains tabular and spatial inter-basin transfer data plus certain tools for using the data.
DOI: 10.6084/m9.figshare.22676146
title: TSHR Variant.xlsx

description: Three hundred and sixty-seven patients with primary congenital hypothyroidism were screened for variants in <em>TSHR </em>by whole exome sequencing.
DOI: 10.6084/m9.figshare.21103402
title: Laboratory experiments reveal the influences of amplitude and duration of cyclic loading on earthquake-triggered landslides

description:  
<pre><code>The data describe the changes in the mechanical properties of the sample during vibration, all from experiments.</code></pre>
DOI: 10.6084/m9.figshare.13237498
title: Additional file 1 of DLDTI: a learning-based framework for drug-target interaction identification using neural networks and network representation

description: Additional file 1: Table S1. Complete results of GO and KEGG analysis.
DOI: 10.6084/m9.figshare.13237498.v1
title: Additional file 1 of DLDTI: a learning-based framework for drug-target interaction identification using neural networks and network representation

description: Additional file 1: Table S1. Complete results of GO and KEGG analysis.
DOI: 10.6084/m9.figshare.7470380
title: Additional file 4: of Systems biology analysis reveals new insights into invasive lung cancer

description: Table S2. GO terms of the up- and down-regulated genes. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.7470365.v1
title: Additional file 1: of Systems biology analysis reveals new insights into invasive lung cancer

description: Figure S1. The hierarchical clustering of the 18 normal (blue), AIS (orange), and invasive samples (purple) based on gene expression. (XLSX 50 kb)
DOI: 10.6084/m9.figshare.7470398
title: Additional file 6: of Systems biology analysis reveals new insights into invasive lung cancer

description: Table S3. The enriched pathways of the 19 core subnetworks. (XLSX 38 kb)
DOI: 10.6084/m9.figshare.13237501
title: Additional file 2 of DLDTI: a learning-based framework for drug-target interaction identification using neural networks and network representation

description: Additional file 2: Table S2. Complete results of predicted targets of TMPZ.
DOI: 10.6084/m9.figshare.23722254.v1
title: Additional file 6 of Systems pharmacology dissection of pharmacological mechanisms of Xiaochaihu decoction against human coronavirus

description: Additional file 6: Supplementary table 6.
DOI: 10.6084/m9.figshare.23722239.v1
title: Additional file 1 of Systems pharmacology dissection of pharmacological mechanisms of Xiaochaihu decoction against human coronavirus

description: Additional file 1: Supplementary table 1.
DOI: 10.6084/m9.figshare.5897587.v1
title: Graphene oxide-coated stir bar sorptive extraction of trace aflatoxins from soy milk followed by high performance liquid chromatography-laser-induced fluorescence detection

description: Mycotoxins are potential food pollutants produced by fungi. Among them, aflatoxins (AFs) are the most toxic. Therefore, AFs were selected as models, and a sensitive, simple and green graphene oxide (GO)-based stir bar sorptive extraction (SBSE) method was developed for extraction and determination of AFs with high performance liquid chromatography-laser-induced fluorescence detector (HPLC-LIF). This method improved the sensitivity of AFs detection and solved the deposition difficulty of the direct use of GO as adsorbent. Several parameters including a spiked amount of NaCl, stirring rate, extraction time and desorption time were investigated. Under optimal conditions, the quantitative method had low limits of detection of 2.4–8.0 pg/mL, which were better than some reported AFs analytical methods. The developed method has been applied to soy milk samples with good recoveries ranging from 80.5 to 102.3%. The prepared GO-based SBSE can be used as a sensitive screening technique for detecting AFs in soy milk.
DOI: 10.6084/m9.figshare.7470362
title: Additional file 1: of Cyclin G2 suppresses Wnt/Î˛-catenin signaling and inhibits gastric cancer cell growth and migration through Dapper1

description: Figure S1. In silico assay of cyclin G2 expression level in gastric cancer from Oncomine. Figure S2. The prognostic value of Cyclin G2 in gastric cancer. Figure S3. Positive and negative controls of immunohistochemistry assay. Bone marrow sections was used to validate cyclin G2 and Ki-67 antibody. Positive immunostaining presented as brown color counterstained with haematoxylin. IgGs against the species where the primary antibody was produced were used as negative controls of the staining (IgG). (ZIP 1323 kb)
DOI: 10.6084/m9.figshare.7470362.v1
title: Additional file 1: of Cyclin G2 suppresses Wnt/Î˛-catenin signaling and inhibits gastric cancer cell growth and migration through Dapper1

description: Figure S1. In silico assay of cyclin G2 expression level in gastric cancer from Oncomine. Figure S2. The prognostic value of Cyclin G2 in gastric cancer. Figure S3. Positive and negative controls of immunohistochemistry assay. Bone marrow sections was used to validate cyclin G2 and Ki-67 antibody. Positive immunostaining presented as brown color counterstained with haematoxylin. IgGs against the species where the primary antibody was produced were used as negative controls of the staining (IgG). (ZIP 1323 kb)
DOI: 10.6084/m9.figshare.5897587
title: Graphene oxide-coated stir bar sorptive extraction of trace aflatoxins from soy milk followed by high performance liquid chromatography-laser-induced fluorescence detection

description: Mycotoxins are potential food pollutants produced by fungi. Among them, aflatoxins (AFs) are the most toxic. Therefore, AFs were selected as models, and a sensitive, simple and green graphene oxide (GO)-based stir bar sorptive extraction (SBSE) method was developed for extraction and determination of AFs with high performance liquid chromatography-laser-induced fluorescence detector (HPLC-LIF). This method improved the sensitivity of AFs detection and solved the deposition difficulty of the direct use of GO as adsorbent. Several parameters including a spiked amount of NaCl, stirring rate, extraction time and desorption time were investigated. Under optimal conditions, the quantitative method had low limits of detection of 2.4–8.0 pg/mL, which were better than some reported AFs analytical methods. The developed method has been applied to soy milk samples with good recoveries ranging from 80.5 to 102.3%. The prepared GO-based SBSE can be used as a sensitive screening technique for detecting AFs in soy milk.
DOI: 10.6084/m9.figshare.7470365
title: Additional file 1: of Systems biology analysis reveals new insights into invasive lung cancer

description: Figure S1. The hierarchical clustering of the 18 normal (blue), AIS (orange), and invasive samples (purple) based on gene expression. (XLSX 50 kb)
DOI: 10.6084/m9.figshare.23722278.v1
title: Additional file 3 of Aligning intuition and theory: a novel approach to identifying the determinants of behaviours necessary to support implementation of evidence into practice

description: Additional file 3. TDF domains and BCTs counting exercise (counts of number of barriers, TDF domains represented, behaviour change techniques used, theoretical alignment of intuitive strategies).
DOI: 10.6084/m9.figshare.13468159
title: Additional file 8 of Comparative genomics of Klebsiella michiganensis BD177 and related members of Klebsiella sp. reveal the symbiotic relationship with Bactrocera dorsalis

description: Additional file 8 Table S6. Annotate results of the unique orthogroups of BD177 from comparative genomics by eggNOGmapper.
DOI: 10.6084/m9.figshare.9043373.v1
title: Additional file 2: of KIFC1 is activated by TCF-4 and promotes hepatocellular carcinoma pathogenesis by regulating HMGA1 transcriptional activity

description: MS1-proteins-HepG2-vector. MS2-proteins-HepG2-KIFC1. MS3-HepG2-KIFC1 vs Vector (ZIP 72 kb)
DOI: 10.6084/m9.figshare.24249295
title: The necessity and safety of simultaneous cholecystectomy during gastric surgery for patients with asymptomatic cholelithiasis

description: The incidence of cholelithiasis is higher among individuals who have undergone gastric surgery. The benefits of concomitant gallbladder removal in asymptomatic gallstone patients remain uncertain. The aim was to investigate the necessity and safety of simultaneous cholecystectomy in this particular patient population. We performed a systematic review and meta-analysis to assess the incidence of asymptomatic cholelithiasis converting to symptomatic after gastric surgery and the complication rate associated with simultaneous cholecystectomy. PubMed, Embase, and the Cochrane Library were searched for relevant articles published until 10 March 202210 March 2022. Patients with asymptomatic cholelithiasis after gastric surgery were at a higher risk of developing symptomatic cholelithiasis compared to those without cholelithiasis (relative risk [RR] 2.28, 95% confidence interval [CI] 1.23–4.25) and those with unknown gallbladder conditions (RR 2.70, 95% CI 1.54–4.73). Additionally, patients who underwent simultaneous cholecystectomy did not face a higher risk of complications compared to those who only underwent gastric surgery (RR 0.86, 95% CI 0.48–1.53). Simultaneous cholecystectomy is both necessary and safe for patients with asymptomatic cholelithiasis undergoing gastric surgery. It is crucial to assess the gallbladder’s condition before gastric surgery, and if the gallbladder status is unknown, simultaneous cholecystectomy should be avoided.
DOI: 10.6084/m9.figshare.24249295.v1
title: The necessity and safety of simultaneous cholecystectomy during gastric surgery for patients with asymptomatic cholelithiasis

description: The incidence of cholelithiasis is higher among individuals who have undergone gastric surgery. The benefits of concomitant gallbladder removal in asymptomatic gallstone patients remain uncertain. The aim was to investigate the necessity and safety of simultaneous cholecystectomy in this particular patient population. We performed a systematic review and meta-analysis to assess the incidence of asymptomatic cholelithiasis converting to symptomatic after gastric surgery and the complication rate associated with simultaneous cholecystectomy. PubMed, Embase, and the Cochrane Library were searched for relevant articles published until 10 March 202210 March 2022. Patients with asymptomatic cholelithiasis after gastric surgery were at a higher risk of developing symptomatic cholelithiasis compared to those without cholelithiasis (relative risk [RR] 2.28, 95% confidence interval [CI] 1.23–4.25) and those with unknown gallbladder conditions (RR 2.70, 95% CI 1.54–4.73). Additionally, patients who underwent simultaneous cholecystectomy did not face a higher risk of complications compared to those who only underwent gastric surgery (RR 0.86, 95% CI 0.48–1.53). Simultaneous cholecystectomy is both necessary and safe for patients with asymptomatic cholelithiasis undergoing gastric surgery. It is crucial to assess the gallbladder’s condition before gastric surgery, and if the gallbladder status is unknown, simultaneous cholecystectomy should be avoided.
DOI: 10.6084/m9.figshare.23722245.v1
title: Additional file 3 of Systems pharmacology dissection of pharmacological mechanisms of Xiaochaihu decoction against human coronavirus

description: Additional file 3: Supplementary table 3.
DOI: 10.6084/m9.figshare.23722251
title: Additional file 5 of Systems pharmacology dissection of pharmacological mechanisms of Xiaochaihu decoction against human coronavirus

description: Additional file 5: Supplementary table 5.
DOI: 10.6084/m9.figshare.23722305
title: Additional file 6 of Spatial heterogeneity of tumor microenvironment influences the prognosis of clear cell renal cell carcinoma

description: Additional file 6: Table S1. Information of ccRCC tissue microarray. Table S2. Patient information for samples enrolled in the study (ccRCC tissue microarray). Table S3. Antibody panel used for acquiring images with IMC. Table S4. Details of IMC acquired images. Table S5. Cell type annotation rules. Table S6. Information of patients receiving targeted therapy and/or immunotherapy.
DOI: 10.6084/m9.figshare.9043373
title: Additional file 2: of KIFC1 is activated by TCF-4 and promotes hepatocellular carcinoma pathogenesis by regulating HMGA1 transcriptional activity

description: MS1-proteins-HepG2-vector. MS2-proteins-HepG2-KIFC1. MS3-HepG2-KIFC1 vs Vector (ZIP 72 kb)
DOI: 10.6084/m9.figshare.23722239
title: Additional file 1 of Systems pharmacology dissection of pharmacological mechanisms of Xiaochaihu decoction against human coronavirus

description: Additional file 1: Supplementary table 1.
DOI: 10.6084/m9.figshare.23722251.v1
title: Additional file 5 of Systems pharmacology dissection of pharmacological mechanisms of Xiaochaihu decoction against human coronavirus

description: Additional file 5: Supplementary table 5.
DOI: 10.6084/m9.figshare.23722242
title: Additional file 2 of Systems pharmacology dissection of pharmacological mechanisms of Xiaochaihu decoction against human coronavirus

description: Additional file 2: Supplementary table 2.