cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7356770
title: خبرنامه علم سنجی

description: <b>خبرنامه علم سنجی</b> که ۱۱ شماره از آن (۴ شماره در سال) در فاصله بهار ۱۳۹۰ تا پاییر ۱۳۹۲ در پژوهشگاه علوم و فناوری اطلاعات ایران (ایرانداک)، پژوهشکده علوم اطلاعات منتشر شد. این خبرنامه دیگر منتشر نمی‌شود و این آرشیوه نسخه های قدیمی است<br><b>شماره ها</b><b>شماره ۱ بهار ۱۳۹۰</b>آغاز کار، جمالیجایگاه ایران در علم جهانی، نفیسه دهقانپورمعرفی نرم افزار هیس تسایت، مهری صدیقیپایان نامه های علم سنجیمعرفی طرح پژوهشیاخبار<br><b>شماره ۲ تابستان ۱۳۹۰</b>سخن آغازین، سعید اسدیعلم سنجی در قامت یک رشته دانشگاهی، مصاحبه با دکتر حمزه علی نورمحمدیگزارش کنفرانس، احسان محمدیاخبار<br><b>شماره ۳ پاییز ۱۳۹۰</b>سخن آغازین، سعید اسدیخبرهای پژوهشگاه علوم و فناوری اطلاعات ایران آمار و ارقاماخبارانتشاراتهمایش ها<br><b>شماره ۴ زمستان ۱۳۹۰</b>سخن آغازین: یك سال با شما، سعید اسدیبررسی چشم انداز در حال تغییر پژوهش در کشورهای عربی، فارسی و ترک زبان خاورمیانه - مقاله ترجمه، مترجم جواد ریاحی اصلخبرهای پژوهشگاه علوم و فناوری اطلاعات ایران اخبار و رویدادهای علمیمعرفی كتاب<br><b>شماره ۵ بهار ۱۳۹۱</b>سخن نخست، سعید اسدیچگونه عملکرد پژوهشی خود را به رایگان رصد کنیم، حمید رضا جمالی مهموئیابزارهای نرم افزار نگاشت علمی: بررسی، تحلیل، و مطالعه مشارکتی میان ابزارها - بخش اول – مقاله ترجمه، مترجمان سامان ثقفی و مریم اسدیتصویر: روند پرشتاب تولیدات علمی ایراناخبار<br><b>شماره ۶ تابستان ۱۳۹۱</b>سخن نخست، سعید اسدیعلم‌سنجی: مقاله دانشنامه‌ای، نوشته لوئت لیدسدورف، ترجمه مهسا نیکزادابزارهای نرم افزار نگاشت علمی: بررسی، تحلیل، و مطالعه مشارکتی میان ابزارها بخش دوم - مقاله ترجمه، مترجمان سامان ثقفی و مریم اسدیاخبار<br><b>شماره ۷ پاییز ۱۳۹۱</b>سخن نخست، سعید اسدیمصاحبه با دكتر نورمحمدی در خصوص كولنت 2012، مصاحبه از سعید نورزادرتبه بندی دانشگاه های علوم پزشكیخبرهای حوزه علم سنجیهمایش ها<br><b>شماره ۸ زمستان ۱۳۹۱</b>گزارش مجله نیچر از تولید علم در ۲۰۱۲، حمید رضا جمالی مهموئیمعرفی پایگاه سایمگو، فائزه آقا ملاییموتورهای جستجوی فارسی و مقایسه تطبیقی آن‌ها با بینگ، عبدالرضا نوروزی جاکلیاخبار<br><b>شماره ۹ بهار ۱۳۹۲</b>علم ایران در آی اس آی و اسکوپوس، حمید رضا جمالی مهموئیرتبه‌بندی دانشگاه لایدن از دانشگاه‌های جهان، حمید رضا جمالی مهموئیاولین‌ها و ترین‌های ایران در آی اس آی، حمید رضا جمالی مهموئیارتباط علمی تحت وب در عصر جهانی‌شدن، مقاله ترجمه، مترجمان عباس رجبی و نادیا حاجی عزیزینگاشت معنایی واژه‌ها و همایندی واژگان در بافت متن‌ها، مقاله ترجمه، نوشته لوئت لیدسدورف،‌مترجم حمید احمدیاخبار<br><b>شماره ۱۰ تابستان ۱۳۹۲</b>سخن نخست، سعید اسدیارتباط علمی تحت وب در عصر جهانی‌شدن - بخش دوم و پایانی مقاله ترجمه، مترجمان عباس رجبی و نادیا حاجی عزیزینگاشت معنایی واژه‌ها و همایندی واژگان در بافت متن‌ها -بخش دوم و پایانی، مقاله ترجمه، نوشته لوئت لیدسدورف،‌مترجم حمید احمدیاخبار انتشارات و همایش‌ها<br><b>شماره ۱۱ پاییز ۱۳۹۲</b>تحلیل استنادی کتاب‌های تخصصی دوره کارشناسی ارشد علم‌سنجی، لیلا سلیمانی اردکانی گزارش رتبه‌بندی کشورهای دنیا بر اساس دانشگاه‌های برتر آن‌ها، عبدالصمد کرامت فرگزارشی از همایش مفاهیم نظری و کاربردی علم سنجی : از علم تا عمل، زهرا ساروخانیاخبار<br><br>
DOI: 10.7284/120604
title: Fluorometer data collected during research cruise PE14-09T using a Turner 10-AU instrument system onboard the platform RV Pelican
DOI: 10.6084/m9.figshare.7356752
title: BULLWHO Figshare Supplemental Tables.docx

description: Supplemental Tables for Saxena et al. 2019, Bulletin of the World Health Organization
DOI: 10.7284/112379
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-09T using a Trimble 4000DL instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356752.v1
title: BULLWHO Figshare Supplemental Tables.docx

description: Supplemental Tables for Saxena et al. 2019, Bulletin of the World Health Organization
DOI: 10.7284/116175
title: Anemometer data collected during research cruise PE14-10B using a RM Young 50260 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116500
title: Barometer data collected during research cruise PE14-10B using a Vaisala PTB101B instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356752.v2
title: BULLWHO Figshare Supplemental Tables.docx

description: Supplemental Tables for Saxena et al. 2019, Bulletin of the World Health Organization
DOI: 10.7284/124636
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PE14-10B using a Sea-Bird SBE-911+ instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356752.v3
title: BULLWHO Figshare Supplemental Tables.docx

description: Supplemental Tables for Saxena et al. 2019, Bulletin of the World Health Organization
DOI: 10.7284/120605
title: Fluorometer data collected during research cruise PE14-10B using a Turner 10-AU instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112387
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-10B using a Trimble 4000DL instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116533
title: Hygrometer data collected during research cruise PE14-10B using a Vaisala HMP45 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116588
title: Meteorological Station data collected during research cruise PE14-10B using a CWS Magellan instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112386
title: Transmissometer data collected during research cruise PE14-10B using a WET Labs C-Star instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356677
title: dataset for phylogenetic analyses

description: All data files involving phylogenetic analyses (sequence alignments, partition schemes, phylogenetic trees, individual gene trees, and loci list).
DOI: 10.7284/112384
title: TSG (Thermosalinograph) data collected during research cruise PE14-10B using a Sea-Bird SBE-21 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116176
title: Anemometer data collected during research cruise PE14-10C using a RM Young 50260 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116501
title: Barometer data collected during research cruise PE14-10C using a Vaisala PTB101B instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112391
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-10C using a Trimble 4000DL instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356653
title: Additional file 1: of Time-to-update of systematic reviews relative to the availability of new evidence

description: List of systematic reviews including new trials. (CSV 24 kb)
DOI: 10.6084/m9.figshare.7356653.v1
title: Additional file 1: of Time-to-update of systematic reviews relative to the availability of new evidence

description: List of systematic reviews including new trials. (CSV 24 kb)
DOI: 10.7284/116534
title: Hygrometer data collected during research cruise PE14-10C using a Vaisala HMP45 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116589
title: Meteorological Station data collected during research cruise PE14-10C using a CWS Magellan instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356635
title: Additional file 1: of De novo transcriptome assembly of brackish water flea Diaphanosoma celebensis based on short-term cadmium and benzo[a]pyrene exposure experiments

description: Table S1. Summary of the library construction. Table S2. Summary of the de novo transcriptome assembly results. Table S3. Transcriptional expression analysis. Table S4. Gene Ontology (GO) analysis for the three categories. Table S5. KEGG pathway analysis for uniquely or commonly up- or downregulated transcripts in the transcriptome of Diaphanosoma celebensis. (XLSX 21456â kb)
DOI: 10.6084/m9.figshare.7356638
title: Additional file 6: of Construction of a high-density genetic map: genotyping by sequencing (GBS) to map purple seed coat color (Psc) in hulless barley

description: Gene annotations of 7H within the region encompassing 90.50â 90.70Â cM. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.7356635.v1
title: Additional file 1: of De novo transcriptome assembly of brackish water flea Diaphanosoma celebensis based on short-term cadmium and benzo[a]pyrene exposure experiments

description: Table S1. Summary of the library construction. Table S2. Summary of the de novo transcriptome assembly results. Table S3. Transcriptional expression analysis. Table S4. Gene Ontology (GO) analysis for the three categories. Table S5. KEGG pathway analysis for uniquely or commonly up- or downregulated transcripts in the transcriptome of Diaphanosoma celebensis. (XLSX 21456â kb)
DOI: 10.7284/112392
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PE14-10D using a Sea-Bird SBE-911+ instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.12885584
title: Data for "Emulating ocean dynamic sea level by two-layer pattern scaling"

description: This dataset include the data used to support the findings in the study "Emulating ocean dynamic sea level by two-layer pattern scaling"
DOI: 10.6084/m9.figshare.7356632
title: Additional file 5: of Construction of a high-density genetic map: genotyping by sequencing (GBS) to map purple seed coat color (Psc) in hulless barley

description: Gene annotations of 7H within the region encompassing of 84.50â 86.00Â cM. (XLSX 30 kb)
DOI: 10.6084/m9.figshare.7356632.v1
title: Additional file 5: of Construction of a high-density genetic map: genotyping by sequencing (GBS) to map purple seed coat color (Psc) in hulless barley

description: Gene annotations of 7H within the region encompassing of 84.50â 86.00Â cM. (XLSX 30 kb)
DOI: 10.7284/116177
title: Anemometer data collected during research cruise PE14-11 using a RM Young 50260 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356623
title: Additional file 4: of Construction of a high-density genetic map: genotyping by sequencing (GBS) to map purple seed coat color (Psc) in hulless barley

description: Gene annotations of 7H within the region encompassing 77.30â 78.50Â cM. (XLSX 15 kb)
DOI: 10.7284/116502
title: Barometer data collected during research cruise PE14-11 using a Vaisala PTB101B instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356617
title: Additional file 3: of K13-propeller gene polymorphisms in Plasmodium falciparum parasite population: a systematic review protocol of burden and associated factors

description: Data Extraction form. (XLS 26 kb)
DOI: 10.6084/m9.figshare.7356623.v1
title: Additional file 4: of Construction of a high-density genetic map: genotyping by sequencing (GBS) to map purple seed coat color (Psc) in hulless barley

description: Gene annotations of 7H within the region encompassing 77.30â 78.50Â cM. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7356617.v1
title: Additional file 3: of K13-propeller gene polymorphisms in Plasmodium falciparum parasite population: a systematic review protocol of burden and associated factors

description: Data Extraction form. (XLS 26 kb)
DOI: 10.7284/124637
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PE14-11 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356611
title: Additional file 3: of Construction of a high-density genetic map: genotyping by sequencing (GBS) to map purple seed coat color (Psc) in hulless barley

description: Gene annotations of 7H within the region encompassing 71.00â 73.10Â cM. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7356611.v1
title: Additional file 3: of Construction of a high-density genetic map: genotyping by sequencing (GBS) to map purple seed coat color (Psc) in hulless barley

description: Gene annotations of 7H within the region encompassing 71.00â 73.10Â cM. (XLSX 15 kb)
DOI: 10.7284/120606
title: Fluorometer data collected during research cruise PE14-11 using a Turner 10-AU instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112397
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-11 using a Trimble 4000DL instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116535
title: Hygrometer data collected during research cruise PE14-11 using a Vaisala HMP45 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116590
title: Meteorological Station data collected during research cruise PE14-11 using a CWS Magellan instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356590
title: UCE probe sets for Phthiraptera

description: UCE probe sets for Phthiraptera
DOI: 10.6084/m9.figshare.7356569
title: MarbleData

description: This is the data associated with the paper: "Scales of collective entrainment and intermittent transport in collision-driven bed load" The authors have made available the trajectory data extracted from the raw photos as well as the data used to make the plots included in the paper. A description of both data types is included in the README of this Fileset.
DOI: 10.6084/m9.figshare.7356569.v1
title: MarbleData

description: This is the data associated with the paper: "Scales of collective entrainment and intermittent transport in collision-driven bed load" The authors have made available the trajectory data extracted from the raw photos as well as the data used to make the plots included in the paper. A description of both data types is included in the README of this Fileset.
DOI: 10.6084/m9.figshare.7356566
title: KDP_doifile.csv

description: This data has been generated from the Ketamine Data Project. Three clinics participated in research involving meeting with clients for psychotherapy sessions which entailed Ketamine-Assisted Psychotherapy (KAP). Pre- and post-treatment data is included in the dataset.
DOI: 10.7284/112396
title: Transmissometer data collected during research cruise PE14-11 using a WET Labs C-Star instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356551
title: Data from: Coming to common ground:The challenges of applying ecological theory developed aboveground to rhizosphere interactions

description: Data generated from a literature search of the number of articles reference different ecological concepts in general ecology journals and journals from four subdisciplines (botany, entomology, soil science, and microbial ecology).
DOI: 10.6084/m9.figshare.7356566.v1
title: KDP_doifile.csv

description: This data has been generated from the Ketamine Data Project. Three clinics participated in research involving meeting with clients for psychotherapy sessions which entailed Ketamine-Assisted Psychotherapy (KAP). Pre- and post-treatment data is included in the dataset.
DOI: 10.7284/112394
title: TSG (Thermosalinograph) data collected during research cruise PE14-11 using a Sea-Bird SBE-21 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356551.v1
title: Data from: Coming to common ground:The challenges of applying ecological theory developed aboveground to rhizosphere interactions

description: Data generated from a literature search of the number of articles reference different ecological concepts in general ecology journals and journals from four subdisciplines (botany, entomology, soil science, and microbial ecology).
DOI: 10.7284/112399
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PE14-12 using a RDI OS-75 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356512
title: Structural exploration of viral matrix protein 40 interaction with the transition metal ions (Ag<sup>+</sup> and Cu<sup>2+</sup>)

description: Here, a theoretical and comprehensive study of the structural features and interaction properties of viral protein 40 is being briefed out to understand the mechanism of Ebola virus (EV) with structural and orbital analysis. In general, viral protein 40 is the key protein for the oligomerization, the N-terminal loop region in the viral protein 40 and it is essential for the viral replication in Ebola. The electronic structures of native N-terminal loop (His124-Asn134) and metalized (M<sup>n+</sup>=Ag<sup>+</sup> and Cu<sup>2+</sup>) complexes are optimized at the M06-2X/LANL2DZ level of theory. Among M<sup>n+</sup>-interacted N-loop complexes, Cu<sup>2+</sup>-interacted N-terminal loop complex has the highest interaction energy of –973.519 kcal/mol and also it has the stabilization energy in the range of 9.92 kcal/mol. The cation-π interactions between His124, Pro131 and Arg134 residues are the important factor, which enhances the interaction energy of viral protein 40. Due to the chelation behavior of metal ions, the backbone and the side chains of N-terminal loop regions are deviated from the planarity that results in the formation of classical hydrogen bonds between N-terminal loop regions. Molecular dynamics simulation studies also revealed that the structural transformations of Nloop into a stable α-helix and β-sheet folded conformations due to the interaction of Ag<sup>+</sup> and Cu<sup>2+</sup> ions in the N-terminal loop region. The hydrogen bond formation and hydrophobic interactions are responsible for the stability and structural changes in N-terminal loop region. Therefore, it is clear that interaction of metal ion with viral protein-40 reduces the replication of the disease by inducing the secondary structural changes. Communicated by Ramaswamy H. Sarma
DOI: 10.7284/116178
title: Anemometer data collected during research cruise PE14-12 using a RM Young 50260 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356512.v1
title: Structural exploration of viral matrix protein 40 interaction with the transition metal ions (Ag<sup>+</sup> and Cu<sup>2+</sup>)

description: Here, a theoretical and comprehensive study of the structural features and interaction properties of viral protein 40 is being briefed out to understand the mechanism of Ebola virus (EV) with structural and orbital analysis. In general, viral protein 40 is the key protein for the oligomerization, the N-terminal loop region in the viral protein 40 and it is essential for the viral replication in Ebola. The electronic structures of native N-terminal loop (His124-Asn134) and metalized (M<sup>n+</sup>=Ag<sup>+</sup> and Cu<sup>2+</sup>) complexes are optimized at the M06-2X/LANL2DZ level of theory. Among M<sup>n+</sup>-interacted N-loop complexes, Cu<sup>2+</sup>-interacted N-terminal loop complex has the highest interaction energy of –973.519 kcal/mol and also it has the stabilization energy in the range of 9.92 kcal/mol. The cation-π interactions between His124, Pro131 and Arg134 residues are the important factor, which enhances the interaction energy of viral protein 40. Due to the chelation behavior of metal ions, the backbone and the side chains of N-terminal loop regions are deviated from the planarity that results in the formation of classical hydrogen bonds between N-terminal loop regions. Molecular dynamics simulation studies also revealed that the structural transformations of Nloop into a stable α-helix and β-sheet folded conformations due to the interaction of Ag<sup>+</sup> and Cu<sup>2+</sup> ions in the N-terminal loop region. The hydrogen bond formation and hydrophobic interactions are responsible for the stability and structural changes in N-terminal loop region. Therefore, it is clear that interaction of metal ion with viral protein-40 reduces the replication of the disease by inducing the secondary structural changes. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.7356518
title: Epigallocatechin-3-gallate location and interaction with late endosomal and plasma membrane model membranes by molecular dynamics

description: Epigallocatechin-3-gallate (EGCG) is the most abundant polyphenol in green tea and it has been reported to have many beneficial properties against many different types of illnesses and infections. However, the exact mechanism/s underlying its biological effects are unknown. It has been previously shown that EGCG is capable of binding to and disrupting the membrane, so that some of its effects on biological systems could be ascribed to its capacity to incorporate into the biological membrane and modulate its structure. In this work, we have used atomistic molecular dynamics (MD) to discern the location and orientation of EGCG in model membranes and the possible existence of specific interactions with membrane lipids. For that goal, we have used in our simulation two complex model membranes, one resembling the plasma membrane (PM) and the other one the late endosome (LE) membrane. Our results support that EGCG tends to associate with the membrane and exists inside it in a relatively stable and steady location with a low propensity to be associated with other EGCG molecules. Interestingly, EGCG forms hydrogen bonds with POPC and POPE in the PM system but POPC and BMP and no POPE in the LE. These data suggest that the broad beneficial effects of EGCG could be mediated, at least in part, through its membranotropic effects and therefore membrane functioning. Communicated by Ramaswamy H. Sarma