cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3829167
title: WTC1.1 (WikiTailor corpus v. 1.1)

description:  
Content:
List of the 743 domains, their term vocabularies in 10 languages, and the Wikipedia articles associated to each domain extracted by the best model described in:
  Cristina España-Bonet, Alberto Barrón-Cedeño and Lluís Màrquez. "Tailoring and Evaluating the Wikipedia for in-Domain Comparable Corpora Extraction."  Knowledge and Information Systems, Volume 65, pages 1365-1397. 2023. Springer-Verlag, London Ldt. https://doi.org/10.1007/s10115-022-01767-5
  https://github.com/cristinae/WikiTailor
 
Files Description:

commonCats2015.enesdefrcaareuelrooc.tsv
Multilingual domains listed one per line, languages are separated by a tab in the order en, es, de, fr, ca, ar, eu, el, ro and oc. For each language we include the pair "ID categoryName" separated by a blank space.

[LAN].0.tar.bz
A folder per domain for language [LAN] containing the vocabulary and IDs of the extracted articles by the Wikitailor model 50-WT100.

extraction[LAN]0.tar.bz
A folder per domain for language [LAN] containing the text of the extracted articles. The name of the file corresponds to the IDs in [LAN].0.tar.bz.
DOI: 10.5281/zenodo.3822685
title: WTC1.1 (WikiTailor corpus v. 1.1)

description:  
Content:
List of the 743 domains, their term vocabularies in 10 languages, and the Wikipedia articles associated to each domain extracted by the best model described in:
  Cristina España-Bonet, Alberto Barrón-Cedeño and Lluís Màrquez. "Tailoring and Evaluating the Wikipedia for in-Domain Comparable Corpora Extraction."  Knowledge and Information Systems, Volume 65, pages 1365-1397. 2023. Springer-Verlag, London Ldt. https://doi.org/10.1007/s10115-022-01767-5
  https://github.com/cristinae/WikiTailor
 
Files Description:

commonCats2015.enesdefrcaareuelrooc.tsv
Multilingual domains listed one per line, languages are separated by a tab in the order en, es, de, fr, ca, ar, eu, el, ro and oc. For each language we include the pair "ID categoryName" separated by a blank space.

[LAN].0.tar.bz
A folder per domain for language [LAN] containing the vocabulary and IDs of the extracted articles by the Wikitailor model 50-WT100.

extraction[LAN]0.tar.bz
A folder per domain for language [LAN] containing the text of the extracted articles. The name of the file corresponds to the IDs in [LAN].0.tar.bz.
DOI: 10.6073/pasta/3238e49beee764aacab539c462e3f06b
title: Monitoring of nutrient and sulfide concentrations in porewaters of mangrove forests from the Shark River Slough and Taylor Slough, Everglades National Park (FCE LTER), Florida, USA, December 2000 - ongoing

description: To monitor soil chemistry in the mangrove sites SRS4, SRS5 and SRS6, SRS7, and TS/Ph6b, TS/Ph7b and TS/Ph8, porewater concentrations of sulfide, PO4, NH4, NO2 and NO3 have been analyzed.
DOI: 10.34740/kaggle/dsv/6866506
title: Google Project: Cyclistic Case Study
DOI: 10.5258/soton/d2700
title: Cladistic revision of Cretaceous Brachylepadomorpha and Verrucomorpha dataset

description: This dataset comprises the TNT script to run a cladistic analysis of sessile cirripede groups and bootstrap resampling with 1000 replicates; the output files from TNT; the supporting Nexus file; and an R script for post-analysis of the tree to calculate the Gap Excess Ratio (GER). The cladistic analysis comprises 48 characters, one of which is continuous, all others were treated as unordered with equal weights. The TNT script also contains instructions to run an implied weights analysis.
DOI: 10.25345/c5mk65k2w
title: MassIVE MSV000093263 - MS2 data of zwitterionic metabolites from phyto- and bacterioplankton using ZIC-HILIC column
title: MS/MS data of zwitterionic metabolites from phytoplankton: Amphidinium carterae CCMP1314, Alexandrium tamarense CCMP1771, Karenia brevis CCMP2229, Lingulodinium polyedra CCMP1738, Prymnesium parvum CCAP946/6, Tetraselmis striata RCC131, Dunaliella salina RCC3579, Prorocentrum minimum CCMP2233. MS/MS data of zwitterionic metabolites from bacterioplankton: Pelagibaca bermudensis HTCC2601 MS/MS data of compound with m/z 157.0970 from algal extract (Dunaliella salina RCC3579)
DOI: 10.25390/caryinstitute.14799018
title: Data: Estimates of wildlife species richness, occupancy, and habitat preference in a human-impacted landscape in New York State

description: Full community matrices for three seasons of camera trapping. Individual count matrices for each species identified each season. Covariate data for study neighborhoods and meta data.The [species common name]_[season].csv sheets are count data matrices from our camera traps. Each row represents an independent camera location and each column represents a unique date from our camera trap season. Note: many of the data sheets contain mostly or all zeroes, indicating that the species of interest was not detected.
DOI: 10.25390/caryinstitute.14799018.v1
title: Data: Estimates of wildlife species richness, occupancy, and habitat preference in a human-impacted landscape in New York State

description: Full community matrices for three seasons of camera trapping. Individual count matrices for each species identified each season. Covariate data for study neighborhoods and meta data.
DOI: 10.5281/zenodo.10067398
title: Rasch analysis of the Forgotten Joint Score in patients with total hip arthroplasty

description: Raw data associated with the scientific publication "Rasch analysis of the Forgotten Joint Score in patients with total hip arthroplasty"
DOI: 10.5281/zenodo.10067397
title: Rasch analysis of the Forgotten Joint Score in patients with total hip arthroplasty

description: Raw data associated with the scientific publication "Rasch analysis of the Forgotten Joint Score in patients with total hip arthroplasty"
DOI: 10.5281/zenodo.7795612
title: Hellisheiði geothermal field: Hydraulic data for pseudo-prospective forecasting models (Dec. 2018 - Jan. 2021)

description: This dataset comprises the compound volumes processed from injection and production rates in the Hellisheiði field between December 2018 and January 2021. This dataset corresponds to the input data for the ETAS-f and Seismogenic Index models of Ritz et al., 2023 (doi:10.22541/essoar.168500354.49240043/v1)
The hydraulic data was acquired and processed by Reykjavik Energy/ON power, the operator of the Hellisheiði geothermal field.
DOI: 10.5281/zenodo.7795611
title: Hellisheiði geothermal field: Hydraulic data for pseudo-prospective forecasting models (Dec. 2018 - Jan. 2021)

description: This dataset comprises the compound volumes processed from injection and production rates in the Hellisheiði field between December 2018 and January 2021. This dataset corresponds to the input data for the ETAS-f and Seismogenic Index models of Ritz et al., 2023 (doi:10.22541/essoar.168500354.49240043/v1)
The hydraulic data was acquired and processed by Reykjavik Energy/ON power, the operator of the Hellisheiði geothermal field.
DOI: 10.6084/m9.figshare.24492109.v1
title: Files for lectures on R for Public Health Data Science Research.

description: Data files for lecture material.
DOI: 10.6084/m9.figshare.24492109
title: Files for lectures on R for Public Health Data Science Research.

description: Data files for lecture material.
DOI: 10.5519/qd.jfbvjnx1
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (15 records)
DOI: 10.25345/c5gt5fr9m
title: MassIVE MSV000093264 - Proximity interactome mapping identifies the SUMO system as a rational drug target in ETV6-transcription factor and PAX5-TF fusion protein leukemias
title: Data deposited contain results from proximity-dependent biotinylation LC-MS (BioID) experiments in which T-REx Flp-In HEK293 cells express ETV6-transcription factors or PAX5-transcription factors fusion proteins in-frame with biotin carboxylase BirA with or without treatment with SUMO inhibitors.
DOI: 10.25345/c5c53fb8h
title: MassIVE MSV000093265 - GNPS - LC-MS2 and BGC paired data from actinomycetes
title: Paired genomics (.fasta) and metabolomics (.mzML) from 320 actinomycetes strains for NPOmix workflow
DOI: 10.5519/qd.of4luzs8
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.3886/r8bf-7q43
title: Morocco Compact - Functional Literacy and Vocational Education: Interim Analysis Report
DOI: 10.3886/hgx8-hz09
title: Morocco Compact - Functional Literacy and Vocational Education: Interim Analysis Report
DOI: 10.3886/fz3f-v687
title: Morocco Compact - Fruit Tree Productivity - Rain-fed Trees Rehabilitation: Design Report - French
DOI: 10.3886/n5sj-9226
title: Morocco Compact - Fruit Tree Productivity - Rain-fed Trees Rehabilitation: Design Report - French
DOI: 10.34740/kaggle/dsv/6866498
title: Klein Bottle
DOI: 10.3886/9tgs-y990
title: Morocco Compact - Fruit Tree Productivity - Rain-fed Trees Rehabilitation: Design Report - English
DOI: 10.3886/7zf9-5588
title: Morocco Compact - Fruit Tree Productivity - Rain-fed Trees Rehabilitation: Design Report - English
DOI: 10.5519/qd.2uv4qvzq
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (190 records)
DOI: 10.5517/ccdc.csd.cc14f3pc
title: CCDC 1055292: Experimental Crystal Structure Determination

description: Related Article: Tuncay Yeşilkaynak, Ruken Esra Demirdöğen, Harun Muslu, Fatih Mehmet Emen|2023|Inorg.Nano-Metal Chem.|53|101|doi:10.1080/24701556.2021.1984532
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34945/f5cp4d
title: Probiotic treatment in female Lewis rats following unilateral incomplete cervical (C5) contusion injury: Microbiome report

description: STUDY PURPOSE: The bidirectional communication between the gastrointestinal tract and the central nervous system appears to be linked to the intestinal microbiome. Research has shown that spinal cord injury (SCI) can disrupt the gut microbiome, leading to gut dysbiosis. These changes can have several negative impacts, such as exacerbated systemic inflammation and susceptibility to infection. Probiotics administered to mice with SCI have been shown to ameliorate gut dysbiosis, confer neuroprotection, and improve locomotor recovery. However, probiotics have also produced conflicting results, making potential claims regarding the application of probiotics as a therapeutic supplement ambiguous. This study aimed to investigate the effects of a commercially available probiotic on recovery in a rat model of cervical SCI. DATA COLLECTED: Female Lewis rats (12 weeks and 180-220 g) received a C4-C5 laminectomy to expose the spinal cord. Using an Infinite Horizon impactor a 125 kdyn unilateral contusion was performed targeting the right side of the spinal C5 level (1.25 mm right of midline, 25 mm drop height at a 15-degree angle). Probiotic treatment was initiated immediately after SCI using VSL#3 containing 450 billion colony-forming units (CFU) of lyophilized bacteria/g, including eight different strains (Bifidobacterium breve, Bifidobacterium infantis, Bifidobacterium longum, Lactobacillus acidophilus, Lactobacillus bulgaricus, Lactobacillus casei, Lactobacillus planatarum, and Streptococcus salivarus subspecies thermophilus). VSL#3 was administered daily via oral gavage for 7 days postinjury (DPI) at a dose of 5 billion CFU. Control group was gavaged with 0.5 ml of sterile filtered water. After 7 DPI, the 5 billion CFU of VSL#3 doses were adjusted to ensure equivalent consumption and administered ad libitum in drinking water for a total of 35 DPI. The overall gut microbiome was assessed prior to injury (baseline) and at 3, 7, 14, and 35 DPI by collecting fresh fecal matter from the rats during their dark cycle and submitted for 16S rRNA analysis. Dataset for Probiotic treatment for acute spinal cord injury: behavioural, histological and systemic cytokine profiles of female Lewis rats is in OSC-SCI#687 DATA USAGE NOTES:
DOI: 10.3886/ragh-2d75
title: Morocco Compact - Financial Services: Final Analysis Report
DOI: 10.3886/nfzg-ba84
title: Morocco Compact - Financial Services: Final Analysis Report
DOI: 10.34740/kaggle/dsv/6867071
title: Balochi Language to English Translation Dataset
DOI: 10.25345/c57d2qj5v
title: MassIVE MSV000093266 - 29 million years of diverse mammalian proteomes recovered from the East African Rift System 2
title: DDA files of the 1.5 Ma Palaeoloxodon recki from the Turkana Basin of Kenya.
DOI: 10.3886/ygzw-ct69
title: Morocco Compact - Fruit Tree Productivity: Final Analysis Report
DOI: 10.3886/mp04-5t71
title: Morocco Compact - Fruit Tree Productivity: Final Analysis Report
DOI: 10.17909/wq6j-x975
title: Data used in paper "Probing the Relationship Between Early Star Formation and CO in the Dwarf Irregular Galaxy WLM with JWST"

description: JWST images of WLM from ERS program 1334, PI Weisz
DOI: 10.34740/kaggle/dsv/6728044
title: Health Workforce Shortage Areas
DOI: 10.6084/m9.figshare.24492250
title: Spread your wings: insect–plant–landscape interactions mediate the wing shape of a multivoltine polyphagous insect

description: Wing morphology may affect the foraging efficiency of polyphagous insects via effects on their flight ability. Variations in wing morphology may be triggered by host plant quality, while landscape composition can also play a role in filtering the ability of variants to colonize new habitats. We investigated how intraspecific variations in wing morphology in a polyphagous insect are mediated by the quality of local resources and the role of the landscape in filtering these variations. We used Bemisia tabaci MEAM-1 (Hemiptera: Aleyrodidae) as a model since the existence of morphotypes that engage in long- and short-distance flights has been proposed previously.This dataset refers to the geometric morphometric analysis of whitefly fore and hind wings. The dataset also contains landscape metrics from the farms where these insects were collected.
DOI: 10.6084/m9.figshare.24492250.v1
title: Spread your wings: insect–plant–landscape interactions mediate the wing shape of a multivoltine polyphagous insect

description: Wing morphology may affect the foraging efficiency of polyphagous insects via effects on their flight ability. Variations in wing morphology may be triggered by host plant quality, while landscape composition can also play a role in filtering the ability of variants to colonize new habitats. We investigated how intraspecific variations in wing morphology in a polyphagous insect are mediated by the quality of local resources and the role of the landscape in filtering these variations. We used Bemisia tabaci MEAM-1 (Hemiptera: Aleyrodidae) as a model since the existence of morphotypes that engage in long- and short-distance flights has been proposed previously.This dataset refers to the geometric morphometric analysis of whitefly fore and hind wings. The dataset also contains landscape metrics from the farms where these insects were collected.
DOI: 10.5066/p9ys7oav
title: Groundwater level trends for 110 U.S. Geological Survey observation wells in the Delaware River Basin

description: This data release contains groundwater level trend results from 110 U.S. Geological Survey (USGS) observation wells in and near the Delaware River Basin. Mean annual groundwater level elevations from water years 2000-2020 were computed from mean daily recorded groundwater levels and discretely measured groundwater levels. Both time series were analyzed using the Mann-Kendall test for monotonic trend and the Thiel-Sen slope. Wells are completed in both confined and unconfined aquifers. Data include well identification number, latitude, longitude, aquifer type, trend slopes and p-values for both mean annual time series at 110 wells.
DOI: 10.25345/c53n20r0m
title: MassIVE MSV000093267 - Botryococcus braunii circadian time course
title: Botryococcus braunii is a colony forming green microalga of the order Chlorophyta. During the growth cycle of this organism, the algae synthesizes long chain liquid hydrocarbon isoprenoid compounds and sequesters them in the extracellular matrix of the colony. Metabolomics was done on samples from a circadian time series. The work (proposal:https://doi.org/10.46936/10.25585/60000723) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.
DOI: 10.25345/c5zw19351
title: MassIVE MSV000093268 - Leveraging pan genomes to investigate diel transcriptomic and metabolomic responses to abiotic stress in Brassica. rapa and B. napus diversity panels.
title: Metabolomic analysis of the abiotic stress experiments on tissue from Brassicaceae genotypes. The work (proposal:https://doi.org/10.46936/10.25585/60001202) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.
DOI: 10.25345/c5v40k916
title: MassIVE MSV000093270 - Exploring Genetics by Environment - 'omic analysis of engineered biomass crops in the lab and field
title: Clonal QSuB switchgrass plants (3 independent transformation events), and their corresponding wild type (var Alamo), grown in a growth chamber and the field, were harvested at two time points (five replicates) during the growing season across two years (2018, 2019), to compare the effects of environment on genetically identical engineered plants. To complement this, we used QsuB plus wild type for Arabidopsis grown in a walk in growth chamber. Three replicates of tissue will be harvested at a single time point. Plants will be well-watered or drought stressed. The work (proposal:https://doi.org/10.46936/10.25585/60000997) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.
DOI: 10.25345/c5qb9vg8c
title: MassIVE MSV000093272 - Diel cycles of gene expression in oligotrophic, dystrophic, and eutrophic lakes to identify new gene functions and dissect carbon cycling metabolisms
title: Aquatic microbial communities contain a vast amount of genetic diversity and we have much to learn about how this manifests to functional diversity. Existing long-term time series data includes 16S tags, metagenomes, single amplified genomes (SAGs), and genomes from metagenomes (GFMs). Information about functional diversity and metabolic capabilities is often unavailable. The study sites include three lakes that are the subject of intense study through the North Temperate Lakes Long Term Ecological Research site: Sparkling Lake (oligotrophic), Lake Mendota (eutrophic), and Trout Bog Lake (dystrophic). The work (proposal:https://doi.org/10.46936/10.25585/60000947) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.
DOI: 10.25345/c52n4zv00
title: MassIVE MSV000093269 - Metabolomic Patterns of Septoria Canker Resistant and Susceptible Populus trichocarpa Genotypes 24 Hours Postinoculation
title: Sphaerulina musiva is an economically and ecologically important fungal pathogen that causes Septoria stem canker and leaf spot disease of Populus species. To bridge the gap between genetic markers and structural barriers previously found to be linked to Septoria canker disease resistance in poplar, we used hydrophilic interaction liquid chromatography and tandem mass spectrometry to identify and quantify metabolites involved with signaling and cell wall remodeling. Fluctuations in signaling molecules, organic acids, amino acids, sterols, phenolics, and saccharides in resistant and susceptible P. trichocarpa inoculated with S. musiva were observed. The patterns of 222 metabolites in the resistant host implicate systemic acquired resistance (SAR), cell wall apposition, and lignin deposition as modes of resistance to this hemibiotrophic pathogen. This pattern is consistent with the expected response to the biotrophic phase of S. musiva colonization during the first 24 h postinoculation. The fungal pathogen metabolized key regulatory signals of SAR, other phenolics, and precursors of lignin biosynthesis that were depleted in the susceptible host. This is the first study to characterize metabolites associated with the response to initial colonization by S. musiva between resistant and susceptible hosts. The work (proposal:https://doi.org/10.46936/10.25585/60000891) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.
DOI: 10.25345/c56d5pn44
title: MassIVE MSV000093273 - Elucidate metabolism of bioenergy-relevant Clostridial and Streptomyces species
title: The goal of this study is to use both "targeted" and "untargeted" metabolomics to elucidate metabolism of Clostrial and Streptomyces species for biofuel production and plant growth promotion, respectively. For these species, we aim to improve the curation of genome-scale metabolic networks and elucidate their novel secondary metabolism to make secondary metabolites whose identities are waiting to be discovered. These metabolic networks will be used to study cell physiology, metabolism, regulation, and metabolic engineering. The work (proposal:https://doi.org/10.46936/10.25585/60000463) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.
DOI: 10.25345/c5b56df9r
title: MassIVE MSV000093275 - A Synthetic Community System for Probing Microbial Interactions Driven by Exometabolites
title: Though most microorganisms live within a community, we have modest knowledge about microbial interactions and their implications for community properties and ecosystem functions. To advance understanding of microbial interactions, we describe a straightforward synthetic community system that can be used to interrogate exometabolite interactions among microorganisms. The filter plate system (also known as the Transwell system) physically separates microbial populations, but allows for chemical interactions via a shared medium reservoir. Exometabolites, including small molecules, extracellular enzymes, and antibiotics, are assayed from the reservoir using sensitive mass spectrometry. Community member outcomes, such as growth, productivity, and gene regulation, can be determined using flow cytometry, biomass measurements, and transcript analyses, respectively. The synthetic community design allows for determination of the consequences of microbiome diversity for emergent community properties and for functional changes over time or after perturbation. Because it is versatile, scalable, and accessible, this synthetic community system has the potential to practically advance knowledge of microbial interactions that occur within both natural and artificial communities. See publications: https://journals.asm.org/doi/10.1128/mSystems.00129-17 and https://journals.asm.org/doi/10.1128/mSystems.00493-20 and https://www.biorxiv.org/content/10.1101/2021.09.05.459016v2.full. The work (proposal:https://doi.org/10.46936/10.25585/60000724) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.