cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.7tv80/7
title: NLDAS2_Gridded

description: Data for primary analysis, both gridded data and the corresponding observed data
DOI: 10.5061/dryad.7tv80/8
title: PRISM_Gridded

description: Data for primary analysis, both gridded data and the corresponding observed data
DOI: 10.5061/dryad.7tv80/9
title: TOPOWX_Gridded

description: Data for primary analysis, both gridded data and the corresponding observed data
DOI: 10.5061/dryad.8v2d0/1
title: AD1_1

description: Alzheimer's disease sample 1 technical replicate 1
DOI: 10.5061/dryad.8v2d0/2
title: AD1_2

description: Alzheimer's disease sample 1 technical replicate 2
DOI: 10.5061/dryad.8v2d0/3
title: AD2_1

description: Alzheimer's disease sample 2 technical replicate 1
DOI: 10.5061/dryad.8v2d0/4
title: AD2_2

description: Alzheimer's disease sample 2 technical replicate 2
DOI: 10.5061/dryad.8v2d0/5
title: AD3_1

description: Alzheimer's disease sample 3 technical replicate 1
DOI: 10.5061/dryad.h44t1/1
title: Figure 4A redcellsovertime

description: Excel version of file used to create Fig 4A
DOI: 10.5061/dryad.jh15q/1
title: Subsequently excluded patients

description: List and causes related to the exclusion of the 29 patients
DOI: 10.5061/dryad.jh15q/2
title: TABLE_1_DESCRIPTION_Database

description: Description of the population
DOI: 10.5061/dryad.jh15q/3
title: TABLE_2_TOLERANCE database

description: Physiology of the patients during the two types of sitting procedure, and side effects description.
DOI: 10.5061/dryad.jh15q/4
title: TABLE_3_OUTCOME_database

description: Patients outcome according to the sitting procedure
DOI: 10.5061/dryad.mj76c/17
title: Thorax CT patient 016

description: Thorax CT from 17 different patients. Metaheader file format.
DOI: 10.5061/dryad.mj76c/18
title: Thorax CT patient 017

description: Thorax CT from 17 different patients. Metaheader file format.
DOI: 10.5061/dryad.pj44k/1
title: RADseq vcf file

description: RADseq vcf file individuals described in table S1 in Supporting Information
DOI: 10.5061/dryad.pj44k/2
title: chloro_alba_trem_can_7snp

description: Plastid DNA for RADseq for 256 individuals from P. alba, P. tremula and P. x canescens
DOI: 10.5061/dryad.r1j0s/1
title: DataDryadDirectory

description: Zip-file with raw data-files for all 10 trials of each of 15 subjects. Each data-file is a .mat file including recorded signals as well as the target-signal. A variable explaining the columns of the recorded data is also included
DOI: 10.5061/dryad.s08t2/4
title: TableS4_regionalcomposition_toregions_2009-2011

description: Table S4. Importance of primary regions of diversity of agricultural crops in contribution to regional food supplies [as measured in contribution of crops to calories (kcal/capita/day), protein (g/capita/day), fat (g/capita/day), and food weight (g/capita/day),] and total regional agricultural production [production quantity (tonnes), harvested area (ha), and production value (million US$)], averaged over years 2009-2011. Regional food supplies values (kcal or g, /capita/day) were formed by deriving a population-weighted average of national food supplies values across countries comprising each region. Regional production values were formed by summing national production values across countries comprising each region. Importance was estimated by grouping the contribution of consumed/produced crops by their primary regions of diversity. As some crops pertain to more than one primary region of diversity, total values across all primary regions per consuming/producing region is not equivalent to total per capita food supply/ total agricultural production values per consuming/producing region. Percentages provide a comparison of the relative importance of primary regions in contribution to the food supply/total production of each region.
DOI: 10.5061/dryad.s08t2/5
title: TableS5_cropcomposition_ofregions

description: Table S5. Crop commodity composition of regional food supplies [as measured in contribution of crops to calories (kcal/capita/day), protein (g/capita/day), fat (g/capita/day), and food weight (g/capita/day),] and total regional agricultural production [production quantity (tonnes), harvested area (ha), and production value (million US$)], averaged over years 2009-2011. Regional food supplies values (kcal or g, /capita/day) were formed by deriving a population-weighted average of national food supplies values across countries comprising each region. Regional production values were formed by summing national production values across countries comprising each region.
DOI: 10.5061/dryad.s08t2/6
title: TableS6_util_foreign_2009-2011

description: Table S6. Estimated percent use of foreign crops in current national food supplies and agricultural production systems. Data includes the raw mean minimum and maximum use values across years 2009-2011 per country, and the mean value between minimum and maximum per country across these years, as well as modeled mean values and variation metrics as estimated in a Bayesian framework using an interval-censored response variable bounded between minimum and maximum use estimates.
DOI: 10.5061/dryad.s08t2/7
title: TableS7_util_foreign_overtime_FS_1961-2009

description: Table S7. Change in use of foreign crops in national food supplies, from years 1961-2009. Data includes minimum and maximum use values for each variable for each country in each year, as well as slopes of change and variation metrics over the time period as estimated in a Bayesian framework using an interval-censored response variable bounded between minimum and maximum use estimates. Year was centered at 1985 for modeling purposes, thus model intercepts represent mean use in this year.
DOI: 10.5061/dryad.s08t2/8
title: TableS8_util_foreign_overtime_prod_1961-2011

description: Table S8. Change in use of foreign crops in national agricultural production systems, from years 1961-2011. Data includes minimum and maximum use values for each variable for each country in each year, as well as slopes of change and variation metrics over the time period as estimated in a Bayesian framework using an interval-censored response variable bounded between minimum and maximum use estimates. Year was centered at 1985 for modeling purposes, thus model intercepts represent mean use in this year.
DOI: 10.5061/dryad.s7k66/1
title: Zorzia_melanocarpa_ITS
DOI: 10.5061/dryad.0dg47/1
title: NMR data of Water in Aggrecan solutions

description: NMR data of water in Aggrecan solutions in raw data format from both Bruker NMR (Avance II) and Maran NMR. Range of concentrations on both instruments. A ReadMe file is contained within each dataset for additional guidance and identification.
DOI: 10.5061/dryad.26j85/1
title: Raw acoustic data

description: This .CSV file contains the raw data downloaded from the acoustic array, pertaining to the manuscript: 'Restricted grouper reproductive migrations support community-based management'.
DOI: 10.5061/dryad.26j85/2
title: Acoustic tagging data

description: This .CSV file contains the data describing Epinephelus fuscoguttatus fitted with acoustic tags at the Bolsurik FSA, pertaining to the manuscript: 'Restricted grouper reproductive migrations support community-based management'.
DOI: 10.5061/dryad.26j85/3
title: Visitation and migration data

description: This .CSV file contains data collated from 'Raw acoustic data', detailing arrival, departure and residence at, as well as migrations to/from, the Bolsurik FSA during the tagging study discussed in 'Restricted grouper reproductive migrations support community-based management'.
DOI: 10.5061/dryad.3q7bh/1
title: xml_files

description: Input DNA sequence and methodology files for phylogenetic analysis in the program BEAST, in xml file format, for Euastacus, Temnosewellia and Temnohaswellia
DOI: 10.5061/dryad.425gv/1
title: All data

description: Contain data for reproductive effort, offspring morphology, sex ratio and survival analysis. Data description in the README file.
DOI: 10.5061/dryad.7t06c/10
title: Streptococcus_pyogenes_n50
DOI: 10.5061/dryad.7t06c/11
title: Isolate_list
DOI: 10.5061/dryad.7t06c/9
title: Streptococcus_pneumoniae_n50
DOI: 10.5061/dryad.8cv2n/1
title: SourceSinkDriversWorkspaceForDryad

description: Provides simulation files for the HexSim workspace along with a metadata file and instructions on where to find the free and publicly available software.
DOI: 10.5061/dryad.8g470/1
title: SAS Source Code for estimating genotyping error rates

description: Contains SAS script for estimating genotyping error rates using Mendelian incompatibilities.
DOI: 10.5061/dryad.8g470/2
title: SNP_datasets

description: Contains the SNP datasets used for analysis of genotyping error rates from reference alignment, reference alignment rxstacks, de novo assembly and de novo assembly rxstacks.
DOI: 10.5061/dryad.8v2d0/10
title: AD5_2

description: Alzheimer's disease sample 5 technical replicate 2
DOI: 10.5061/dryad.8v2d0/11
title: AD6_1

description: Alzheimer's disease sample 6 technical replicate 1
DOI: 10.5061/dryad.8v2d0/12
title: AD6_2

description: Alzheimer's disease sample 6 technical replicate 2
DOI: 10.5061/dryad.8v2d0/13
title: AD7_1

description: Alzheimer's disease sample 7 technical replicate 1
DOI: 10.5061/dryad.8v2d0/6
title: AD3_2

description: Alzheimer's disease sample 3 technical replicate 2
DOI: 10.5061/dryad.8v2d0/7
title: AD4_1

description: Alzheimer's disease sample 4 technical replicate 1
DOI: 10.5061/dryad.8v2d0/8
title: AD4_2

description: Alzheimer's disease sample 4 technical replicate 2
DOI: 10.5061/dryad.8v2d0/9
title: AD5_1

description: Alzheimer's disease sample 5 technical replicate 1
DOI: 10.5061/dryad.b1pg3/1
title: Seed Quality Raw data and Analysis code

description: Seed quality raw data with SAS statistical analysis code
DOI: 10.5061/dryad.b1pg3/2
title: Sequence Raw Data

description: Raw Sequences for PCR products resulting from PCR reactions using primers in Table 1 of the manuscript
DOI: 10.5061/dryad.b1pg3/3
title: Sequences of nested PCR products-SVNV-06302015

description: Sequences of typical Nested PCR Products
DOI: 10.5061/dryad.b1pg3/4
title: Alignment-BAST-SVNV

description: Alignment of Typical sequences from nested PCR against known SVNV sequences
DOI: 10.5061/dryad.b1pg3/6
title: R10_Root_SVNV-seq

description: Raw sequence from soybean root extraction
DOI: 10.5061/dryad.b1q0v/1
title: YNP postfire species 1991-2013 metadata

description: This Word file explains the data-set contained in the associated Excel file (YNP 1991-2013 Data Dryad.xlsx). The data consist of all vascular plant species, locations, and dates, as recorded in permanent plots established soon after the 1988 Yellowstone fires and periodically re-sampled from 1991-2013.
DOI: 10.5061/dryad.b1q0v/2
title: YNP postfire species 1991-2013 data

description: This Excel file contains listings of all vascular plant species, locations, and dates, as recorded in permanent plots established soon after the 1988 Yellowstone fires and periodically re-sampled from 1991-2013.  See the associated metadata file (YNP 1991-2013 Metadata Dryad.docx) for detailed explanation.
DOI: 10.5061/dryad.b1q0v/3
title: YNP postfire controls 1999-2012 metadata

description: This Word file explains the associated data file (YNP 1999-2012 Data Dryad.xlsx). That data file contains listings of species recorded in extensive permanent plots sampled in 1999 and 2012, plus values of abiotic and biotic variables that could potentially influence local species composition.
DOI: 10.5061/dryad.b1q0v/4
title: YNP postfire controls 1999-2012 data

description: This data file contains listings of species recorded in extensive permanent plots sampled in 1999 and 2012, plus values of abiotic and biotic variables that could potentially influence local species composition. See the associated metadata file (YNP 1999-2012 Metadata Dryad.docx) for detailed explanation.
DOI: 10.5061/dryad.cr890/1
title: Allolobophora chlorotica microsatellite genotypes

description: For each dataset (reference dataset, MSA  and YVE populations ) are given the individual genotypes obtained using five microsatellite markers (Ac 127, Ac 170, Ac 418, Ac 476 and Ac 528). The assignment to known mitochondrial lineage using COI sequences is also indicated.
DOI: 10.5061/dryad.h44t1/2
title: Figure 4B&D vaccineparasiteinteraction

description: Excel file of data used to create Figs 4B&D
DOI: 10.5061/dryad.h44t1/3
title: Figure 4C parasitedensovertime

description: Excel file used to create file 4C
DOI: 10.5061/dryad.h44t1/4
title: Figure 4 code (vb10)

description: R code used to produce Figure 4
DOI: 10.5061/dryad.h4dt0/4
title: Lizards space use data for the Bayesian GLMM models

description: This file includes all the data used for modeling the space use by the lizards. It contains separates sheets for the Early and Late season and columns names are explained in a metadata sheet.
DOI: 10.5061/dryad.j8p21/1
title: Dataset Ruggeri et al. (archived anchovies DNA)

description: Dataset in spreadsheet format reporting basic information about (microsatellite) genotypes and collection data from an archived DNA study of European anchovy (Engraulis ancrasicolus) in the Adriatic basin.
DOI: 10.5061/dryad.jh15q/5
title: TABLE_4_MEDICAL_COMPLICATIONS database

description: Medical complication occurrence and description according to group affiliation
DOI: 10.5061/dryad.k25qf/1
title: AdditiveValues

description: Untreated file generated by the simulation model that contains the additive genetic values and phenotypic values of the simulated parental population. First column = ID; second column = additive value; third column = phenotypic value
DOI: 10.5061/dryad.k25qf/2
title: GenotypeFile

description: Untreated file generated by the simulation model that contains the genotype of the individuals at the Nl neutral loci simulated (Nl columns)
DOI: 10.5061/dryad.k25qf/3
title: PhiACoefficients

description: Untreated file generated by the simulation model that contains the pairwise individual kinship coefficients estimated based on the simulated pedigree (matrix format)
DOI: 10.5061/dryad.k25qf/4
title: LoisellePaternalCoefficients

description: Untreated file generated by the simulation model that contains the pairwise individual paternal relatedness coefficients estimated based on the Loiselle approach (matrix format)
DOI: 10.5061/dryad.m4452/1
title: Data from Benowitz & Moore 2016, BJLS
DOI: 10.5061/dryad.n4r23/1
title: Harvest data 2010 2011 2012

description: Block, patch treatment, year, invader biomass, total biomass, Simpson's diversity, complementarity & selection effects
DOI: 10.5061/dryad.n4r23/2
title: Species pattern data 2010 2011 2012

description: Block, patch treatment, year, no. conspecific patches, no. interspecific edges, proportion of interspecific neighbourships (determined using QRULE, http://www.umces.edu/al/program/gardner/Qrule)
DOI: 10.5061/dryad.s7j42/1
title: Vogwill JEB persistence resistance

description: All relevant data should be on first two tabs.
DOI: 10.5061/dryad.tm53q/1
title: Non-native and native species abundance and richness data at the site level for pre-treatment year (year 0)

description: This file contains the abundance and richness data for  non-native and native species for the pre-treatment year (year 0) for all Nutnet sites included in our analyses. These data was derived at the site level. The description of each variable can be found in the ReadMe file
DOI: 10.5061/dryad.tm53q/2
title: Change in abundance and richness of non-native and native species after nutrient treatments for sites included in the study

description: This file contains data on the change in abundance and richness of non-native and native species after nutrient enrichment (1-3 years) use for analyses. The change in abundance data was derived at the plot level. Metadata can be found in the ReadMe file.
DOI: 10.5061/dryad.tm53q/3
title: Information on sites included in this study

description: This file contains information on the name, location, type  (experimental or observational) and name of persons in charge of setting and maintaining the NutNet sites which data was used for this study. Information on each of the variables included in this file can be found in the ReadMe file.
DOI: 10.5061/dryad.vv197/1
title: Hopkins_etal_landmarkdata

description: Landmark data for all specimens used in analysis, and associated tables linking specimen names to populations and locality information. See published paper for figure showing placement of landmarks on the carapace. Locality table is the same as that published in the supplementary materials.
DOI: 10.5061/dryad.1h189/1
title: Carbon and nitrogen in roots and leaves of crops and wild gourds in the family Cucurbitaceae

description: The percent nitrogen and carbon content of leaves, flowers and roots were measured on a Carlo Erba CHN analyzer. Samples were analyzed in triplicate on two young but fully formed leaves and on roots from each plant to calculate percent nitrogen and carbon. Readme file contains species names and abbreviations.
DOI: 10.5061/dryad.1h189/2
title: Cucurbitacins in roots, flowers and leaves of crops and wild gourds in the family Cucurbitaceae

description: The concentrations of the cucurbitacins are expressed as µg cucurbitacin/g dry tissue sample based on HPLC analysis. Trace amounts are indicated as (++) for prominent peaks too small to be considered for calculations. (+) indicates peaks smaller than (++). (–) indicates peaks smaller than (+). To quantify these data a standard curve, based on peak area, was fashioned for cucurbitacins B and D. The Cucurbitacin B slope 5.00E+06 and intercept 8.00E+06. The Cucurbitacin D slope 8000000.00 and intercept -9000000.00. Readme file contains species names and abbreviations.
DOI: 10.5061/dryad.1h189/3
title: Pollen count from crops and wild gourds in the family Cucurbitaceae

description: For accuracy, three pollen samples were collected from each anther and each sample was counted twice using a hemocytometer. Readme file contains species names and abbreviations.
DOI: 10.5061/dryad.1h189/4
title: Herbivory 2005

description: Field Experiment measuring herbivory on crops and wild gourds in the Cucurbitaceae. DB =  # dead beetles, LB = # live beetles, all beetles are Acalymma vittatum; cotyledon damaged = Yes or No. Damage was assessed on the four youngest fully expanded leaves at each census Lf1 is oldest, Lf4 is youngest.
Scores are 0-4 indicating 0%, 1-25%, 25-50%, 50-75%, or 75-100% leaf area removed. Readme file contains species names and abbreviations.
DOI: 10.5061/dryad.1h189/5
title: Herbivory 2006

description: Field experiment measuring herbivory on crops and wild gourds in the Cucurbitaceae. Dam Lf: Damaged Leaf, B =  # dead beetles, LB = # live beetles, all beetles are Acalymma vittatum. Damage is assessed on the four youngest fully expanded leaves at each census: Lf1 is oldest, Lf4 is youngest. Damage is measured in % area removed
Damage in %: 0, 1, 5, 10, 25, 50, 75, 100 "." = leaves gone.
cot damage: 100 = dead leaves still there. Readme file contains species names and abbreviations.
DOI: 10.5061/dryad.22834/1
title: FeralCat_microsatellite_data

description: A complete set of microsatellite genotypes, location and input files for MSVAR analysis
DOI: 10.5061/dryad.22834/2
title: IBD_cat_data

description: Data for IBD analysis
DOI: 10.5061/dryad.26j85/4
title: Stakeholder survey data

description: This .CSV file contains data collected during stakeholder surveys, pertaining to the study discussed in 'Restricted grouper reproductive migrations support community-based management'.
DOI: 10.5061/dryad.26j85/5
title: Data analysis R script

description: This .R file contains annotated R script to perform analyses discussed in 'Restricted grouper reproductive migrations support community-based management'.
DOI: 10.5061/dryad.3s06b/1
title: MRI-derived lesion mask volumes

description: This folder contains lesion mask volumes (nifti format) for each patient that were created from T1 weighted MRI scans. Additionally, a standard MNI template volume and several parietal region of interest volumes are provided, along with a Matlab script that demonstrates how to load, plot and quantifying these volume data.
DOI: 10.5061/dryad.3s06b/2
title: Stereoscopic task behavioural data

description: Behavioural data from all subjects on the stereoscopic tasks (dynamic, fine, and signal-in-noise) are provided in both .csv spreadsheet and .mat formats. The example Matlab code provided can be used to fit psychometric functions to these data, and produces the series of plots shown in Figure 3 of the paper.
DOI: 10.5061/dryad.3s06b/3
title: Bistable task behavioural data

description: Percept duration data (in seconds) for all subjects (patients and controls) on the bistable tasks is provided in .csv spreadsheet and .mat formats. The accompanying example Matlab script loads the duration data and calculates descriptive statistics for the rotating sphere task, which are plotted similarly to Figures 5 and 6 of the paper.
DOI: 10.5061/dryad.4km97/1
title: Prieto-Marquez&Gutarra_SupplementalData1

description: List of morphological characters used in the phylogenetic analysis.
DOI: 10.5061/dryad.4km97/2
title: Prieto-Marquez&Gutarra_SupplementalData2

description: Character-taxon matrix used in the phylogenetic analysis.
DOI: 10.5061/dryad.4t9f3/1
title: Raw genotype information for samples for all studied SNPs

description: *Sex chromosomal SNPFor sex chromosomal SNP, genotype for male hemizygote has been coded as homozygote genotype for corresponding allele. Sex (1=Male; 2=Female), Pheno (1=Case, 2=Control).
DOI: 10.5061/dryad.523t4/1
title: Data Biol.Lett_testes size

description: Data
DOI: 10.5061/dryad.8nh03/1
title: Estrogen Receptor Alpha immunoreactivity

description: The file contains averaged cell counts for estrogen receptor alpha immunoreactivity in males and females of four species of Peromyscus.  Two that are socially monogamous, P. californicus and P. polionotus and two polygynous, P. maniculatus and P. leucopus.  ER alpha immunoreactive cells counts are presented from five regions of the brain, medial amygdala, bed nucleus of the stria terminalis, medial preoptic area, arcuate nucleus, and ventriomedial hypothalamus.
DOI: 10.5061/dryad.8v2d0/14
title: AD7_2

description: Alzheimer's disease sample 7 technical replicate 2
DOI: 10.5061/dryad.8v2d0/15
title: AD8_1

description: Alzheimer's disease sample 8 technical replicate 1
DOI: 10.5061/dryad.8v2d0/16
title: AD8_2

description: Alzheimer's disease sample 8 technical replicate 2
DOI: 10.5061/dryad.8v2d0/17
title: AD9_1

description: Alzheimer's disease sample 9 technical replicate 1
DOI: 10.5061/dryad.8v2d0/18
title: AD9_2

description: Alzheimer's disease sample 9 technical replicate 2
DOI: 10.5061/dryad.8v2d0/19
title: AD10_1

description: Alzheimer's disease sample 10 technical replicate 1
DOI: 10.5061/dryad.8v2d0/20
title: AD10_2

description: Alzheimer's disease sample 10 technical replicate 2
DOI: 10.5061/dryad.8v2d0/21
title: C1_1

description: Healthy control sample 1 technical replicate 1
DOI: 10.5061/dryad.8v2d0/22
title: C1_2

description: Healthy control sample 1 technical replicate 2
DOI: 10.5061/dryad.8v2d0/23
title: C2_1

description: Healthy control sample 2 technical replicate 1
DOI: 10.5061/dryad.93f51/1
title: WESE_births

description: csv file containing data on pup birth dates, pup sex, year of birth, and attributes of mothers for Weddell seals in Erebus Bay, Antarctica for 4.465 pups in 28 different years during 1993 through 2014.
DOI: 10.5061/dryad.9gn28/1
title: R. leguminosarum de novo assemblies

description: De novo assemblies for 62 strains of R. leguminosarum using the A5 pipeline with a portion of gaps filled in silico with GapFiller v. 1.11. A strain key is included as a ReadMe file.
DOI: 10.5061/dryad.b1pg3/10
title: Field sample Mapped counts RNA seq

description: Total Mapped Counts for the RNA seq analysis of the symptomatic field sample.
DOI: 10.5061/dryad.b1pg3/11
title: Field Sample Mapped Counts Unique RNA seq

description: Unique Mapped Counts for the RNA seq analysis of the symptomatic field sample.