cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7488/ds/3775
title: AAMOS-00 Study: Predicting Asthma Attacks Using Connected Mobile Devices and Machine Learning
title: Mobile device monitoring to inform prediction of asthma attacks: an observational study (AAMOS-00)

description: Monitoring asthma condition is essential to asthma self-management. However, traditional methods of monitoring require high levels of active engagement and patients may regard this level of monitoring as tedious. Passive monitoring with mobile health devices, especially when combined with machine learning, provides an avenue to dramatically reduce management burden. However, data for developing machine learning algorithms are scarce, and gathering new data is expensive. A few asthma mHealth datasets are publicly available, but lack objective and passively collected data which may enhance asthma attack prediction systems. To fill this gap, we carried out the 2-phase, 7-month AAMOS-00 observational study to collect data about asthma status using three smart monitoring devices (smart peak flow meter, smart inhaler, smartwatch), and daily symptom questionnaires. Combined with localised weather, pollen, and air quality reports, we have collected a rich longitudinal dataset to explore the feasibility of passive monitoring and asthma attack prediction. Conducting phase 2 of device monitoring over 12 months, from June 2021 to June 2022 and during the COVID-19 pandemic, 22 participants across the UK provided 2,054 unique patient-days of data. This valuable anonymised dataset has been made publicly available with the consent of participants. Ethics approval was provided by the East of England - Cambridge Central Research Ethics Committee. IRAS project ID: 285505 with governance approval from ACCORD (Academic and Clinical Central Office for Research and Development), project number: AC20145. The study sponsor was ACCORD, the University of Edinburgh. The anonymised dataset was produced with statistical advice from Aryelly Rodriguez - Statistician, Edinburgh Clinical Trials Unit, University of Edinburgh. Protocol: "Predicting asthma attacks using connected mobile devices and machine learning; the AAMOS-00 observational study protocol" - BMJ Open, DOI: 10.1136/bmjopen-2022-064166 # Thesis # Tsang, Kevin CH "Application of data-driven technologies for asthma self-management" (2022) [Doctoral Thesis] University of Edinburgh https://era.ed.ac.uk/handle/1842/40547 The dataset also relates to the publication K.C.H. Tsang, H. Pinnock, A.M. Wilson, D. Salvi and S.A. Shah (2023). "Home monitoring with connected mobile devices for asthma attack prediction with machine learning", Scientific Data 10 ( https://doi.org/10.1038/s41597-023-02241-9 ).
description: aamos00_anonym_data_documentation.docx
DOI: 10.5517/ccdc.csd.cc2fdvxm
title: CCDC 2246691: Experimental Crystal Structure Determination

description: Related Article: Peter  Chu, Michael Clark, Michael J. Zuraw, and Bruce M. Foxman|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25934/pr00009006
title: Data Challenge - Developing tools to improve empirical treatment in low and middle income countries

description: Background: In low- and middle-income countries (LMIC), there is insufficient data that can be used to guide empirical treatment for common bloodstream, respiratory, and urinary tract bacterial infections. In several countries, antibiotics are frequently available without prescription and broad-spectrum antibiotics are irrationally prescribed at first presentation or when patients are not improving. When microbiology samples are taken, it is often after antibiotic administration and particularly when patients are not improving. Additionally, the long laboratory turnaround times diminish the usefulness of the results in guiding treatment. These poor diagnostic stewardship practices and the irrational use of broad-spectrum antibiotics are key drivers of antimicrobial resistance in LMIC.   Aim: We propose to develop empirical guidance for syndrome-based management for bloodstream, respiratory and urinary tract infections. In non-responding patients will estimate the probability of resistance to several antibiotics on condition that there is resistance to the first agent or resistance to up to three agents. Analysis: Particular pathogens are frequently isolated in different specimen, using perato methods we will attribute an infectious syndrome to be caused by 70% of common pathogens. Susceptibility of different drug- pathogen combinations for each infectious syndrome will be calculate [%(95%CI)] and stratified by location (community versus hospital) and age, and time period. The threshold for treatment recommendation will be set at >90%. Geospatial mapping of susceptibility will be done to represent drug susceptibility by syndrome and pathogen for selected periods. The escalation analysis will guide second-line and third-line options based on the choice of the first-line antibiotic that was used. Outcomes: Our study will produce ‘syndromic and escalation antibiograms’ to guide empirical therapy and hence improving patient management, and guiding antibiotic stewardship practices. The analysis will demonstrate that it is possible to inform empirical treatment and essential medicines lists in the LMIC thus strengthening health systems and public health practice.
DOI: 10.57745/0ozanm
title: 20220406_Prep_data_P6_Isere.txt

description: :unav
DOI: 10.57745/ysccc9
title: 20190219_Prep_data_Niskin_Colorado.txt

description: :unav
DOI: 10.57745/mwho4q
title: 20120418_Prep_data_Niskin_Amazon.txt

description: :unav
DOI: 10.57745/t2wfrz
title: 20180122_Prep_data_Niskin_Rhone.txt

description: :unav
DOI: 10.57745/rozdes
title: 20190219_Colorado_ADCP.zip

description: :unav
DOI: 10.57745/aivxpm
title: Metadata.txt

description: :unav
DOI: 10.57745/h6zusd
title: 20120418_Amazon_ADCP.zip

description: :unav
DOI: 10.57745/nvtzdn
title: 20220406_Isere_ADCP.zip

description: :unav
DOI: 10.57745/xw4biu
title: 20220118_Rhone_ADCP.zip

description: :unav
DOI: 10.5281/zenodo.8025046
title: Dataset: Reliability of the domain authority scores calculated by Moz, Semrush, and Ahrefs

description: This dataset contains the <em>Domain Authority</em>, <em>Authority Score</em>, and <em>Domain Rating </em>collected by using Moz, Semrush, and Ahrefs applications. By doing different searches, the data collection was conducted in Google using keywords selected in the most neutral way possible. The selection of keywords was made by applying two criteria: 1) Fifty words of four or more characters were selected from those identified as being the most frequently used on the web, according to the WordFrequency ranking, and 2) the eleven keywords used most during the previous six months to conduct searches on Google, according to Google Trends in November 2022, were added. The data collection was carried out between 11/03/2022 and 12/22/2022. In total, 16,937 results were obtained. All the searches were conducted simultaneously and in the same geographical location to avoid any potential bias. Subsequently, the URL information corresponding to the path, file name, and parameters was removed, resulting in 6,268 domains. All duplicates were then removed, leaving a final sample of 3,151 distinct domains. This data set accompanies the article entitled "Reliability of the domain authority scores calculated by Moz, Semrush, and Ahrefs".
DOI: 10.5281/zenodo.8025045
title: Dataset: Reliability of the domain authority scores calculated by Moz, Semrush, and Ahrefs

description: This dataset contains the <em>Domain Authority</em>, <em>Authority Score</em>, and <em>Domain Rating </em>collected by using Moz, Semrush, and Ahrefs applications. By doing different searches, the data collection was conducted in Google using keywords selected in the most neutral way possible. The selection of keywords was made by applying two criteria: 1) Fifty words of four or more characters were selected from those identified as being the most frequently used on the web, according to the WordFrequency ranking, and 2) the eleven keywords used most during the previous six months to conduct searches on Google, according to Google Trends in November 2022, were added. The data collection was carried out between 11/03/2022 and 12/22/2022. In total, 16,937 results were obtained. All the searches were conducted simultaneously and in the same geographical location to avoid any potential bias. Subsequently, the URL information corresponding to the path, file name, and parameters was removed, resulting in 6,268 domains. All duplicates were then removed, leaving a final sample of 3,151 distinct domains. This data set accompanies the article entitled "Reliability of the domain authority scores calculated by Moz, Semrush, and Ahrefs".
DOI: 10.5283/epub.54294
title: Data Archive of "Geometrische Resonanzen in einem HgTe-basierten dreidimensionalen topologischen Isolator"

description: Daten zur Dissertation "Geometrische Resonanzen in einem HgTe-basierten dreidimensionalen topologischen Isolator"
DOI: 10.6084/m9.figshare.23500758
title: Genbank files corresponding to plasmids pTi6.2, pTi932 and pTi1078.

description: Complete Ti plasmid sequences pTi932, pTi1078 and pTi6.2 were re-annotated using Prokka Version 1.14.5 (Seemann, 2014). Furthermore, sequences of interest were functionally annotated through blastp comparison against the NCBI nonredundant (nr) protein database (https://blast.ncbi.nlm.nih.gov/Blast.cgi; Last accessed on January, 2023). Insertion sequence (IS) elements were identified using ISEscan version 1.7.2.3 (Xie & Tang, 2017). Annotations were manually curated.
DOI: 10.6084/m9.figshare.23500362
title: H123N_Benign

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were slected for classification utilizing the MD simulations study.
DOI: 10.6084/m9.figshare.23500362.v1
title: H123N_Benign

description: A total of 213 PTEN missense variants comprising of 147 VUS, 54 ClinVar Pathogenic and 12 Benign variants were slected for classification utilizing the MD simulations study.
DOI: 10.25345/c5nc5sp31
title: MassIVE MSV000092142 - Bacillus subtilis screening for bacillibactin production on different media
title: Dataset containing OSMAC on Bacillus subtilis 3610 grown on different media types to determine the variable production of bacillibactin.
DOI: 10.6084/m9.figshare.20098893
title: New ant species S<i>chismiscapus exstinctum</i> gen. et sp. nov. (Formicidae: Dolichoderinae) from Miocene Mexican amber

description: A new species of ant (Formicidae: Dolichoderinae) in Miocene Mexican amber is diagnosed and described. <i>Schismiscapus exstinctum</i> gen. et sp. nov. is recognised by having the base of scape flattened and notched; mesosoma long, narrow, and sinuous; hypostomal bridge forming a U-shaped notch without any denticule; anteromedial mesosternum convex; compound eyes positioned anteriorly on head; long post peduncle that joints with the gaster and a long spur on the hind tibiae. A phylogenetic analysis was performed to identify the position of <i>S. exstinctum</i> among dolichoderine ant genera. A close relationship with the genus <i>Leptomyrmex</i> Mayr, 1862 was revealed with both ant genera sharing a hypostomal bridge forming a U-shaped notch without any denticule. Thus, the fossil record of <i>S. exstinctum</i> in Miocene tropics of southern Mexico provides new insights into the evolutionary history of the Leptomyrmecini clade that has a probable Neotropical origin.
DOI: 10.6084/m9.figshare.20029216
title: Beydere 3: a new early Miocene small mammal assemblage from western Anatolia, Turkey

description: The new micromammal site of Beydere 3 represents a typical Anatolian MN3 fauna in the high diversification and abundance of <i>Eumyarion</i>. Notably, two <i>Eumyarion</i> species are new; combined, they make up almost half of the assemblage. While <i>Eumyarion beyderensis</i> sp. nov. shows simple morphology in upper molars, <i>Eumyarion aegeaniensis</i> sp. nov. shows a more complex lophs pattern. In addition, Beydere 3 yielded nine species of rodents and an ochotonid: the hamsters <i>Cricetodon kasapligili, Mirrabella crenulata, Megacricetodon hellenicus, Democricetodon doukasi, Vallaris zappai</i> and <i>Eumyarion</i> sp., the dormice <i>Glirulus ekremi</i> and <i>Glis</i> sp., the beaver <i>Steneofiber eseri</i>, the squirrel <i>Palaeosciurus fissurae</i> and Ochotonidae indet. The fauna is significant in that it represents the first common occurrence of <i>Megacricetodon</i> in Anatolia. <i>Eumyarion</i> and <i>Megacricetodon</i> are both dominant groups which may indicate a signal of environmental change, but still closer to wet conditions. This, in combination with the new species of <i>Eumyarion</i>, suggests that Beydere 3 represents a time slice which was previously not recorded in Anatolia. Radiometric dating of ashes overlying the section indicates that the age of the locality is older than 18.21 (± 0.19) Ma.
DOI: 10.6084/m9.figshare.20132006
title: <i>Paradiospyroxylon kvacekii</i> gen. et sp. nov. from the Paleogene of the Czech Republic: a case study of individual variability and its significance for fossil wood systematics

description: The wood anatomy of <i>Paradiospyroxylon kvacekii</i> gen. et sp. nov. is described and illustrated based on material originating from the Ústí Formation’s volcanic deposits of České středohoří Mts. (Paleogene, Czech Republic). The sample, identified earlier as <i>Manilkaroxylon</i> sp., was critically examined and is interpreted as root wood and proposed as the paratype of <i>Paradiospyroxylon kvacekii</i>. This paper discusses how wood anatomical variation needs to be considered when making systematic and palaeoecological interpretations.
DOI: 10.6084/m9.figshare.20029216.v1
title: Beydere 3: a new early Miocene small mammal assemblage from the western Anatolia, Turkey

description: The new micromammal site of Beydere 3 represents a typical Anatolian MN3 fauna in the high diversification and abundance of <i>Eumyarion</i>. Notably, two <i>Eumyarion</i> species are new; combined, they make up almost half of the assemblage. While <i>Eumyarion beyderensis</i> sp. nov. shows simple morphology in upper molars, <i>Eumyarion aegeaniensis</i> sp. nov. shows a more complex lophs pattern. In addition, Beydere 3 yielded nine species of rodents and an ochotonid: the hamsters <i>Cricetodon kasapligili, Mirrabella crenulata, Megacricetodon hellenicus, Democricetodon doukasi, Vallaris zappai</i> and <i>Eumyarion</i> sp., the dormice <i>Glirulus ekremi</i> and <i>Glis</i> sp., the beaver <i>Steneofiber eseri</i>, the squirrel <i>Palaeosciurus fissurae</i> and Ochotonidae indet. The fauna is significant in that it represents the first common occurrence of <i>Megacricetodon</i> in Anatolia. <i>Eumyarion</i> and <i>Megacricetodon</i> are both dominant groups which may indicate a signal of environmental change, but still closer to wet conditions. This, in combination with the new species of <i>Eumyarion</i>, suggests that Beydere 3 represents a time slice which was previously not recorded in Anatolia. Radiometric dating of ashes overlying the section indicates that the age of the locality is older than 18.21 (± 0.19) Ma.
DOI: 10.6084/m9.figshare.20029216.v2
title: Beydere 3: a new early Miocene small mammal assemblage from western Anatolia, Turkey

description: The new micromammal site of Beydere 3 represents a typical Anatolian MN3 fauna in the high diversification and abundance of <i>Eumyarion</i>. Notably, two <i>Eumyarion</i> species are new; combined, they make up almost half of the assemblage. While <i>Eumyarion beyderensis</i> sp. nov. shows simple morphology in upper molars, <i>Eumyarion aegeaniensis</i> sp. nov. shows a more complex lophs pattern. In addition, Beydere 3 yielded nine species of rodents and an ochotonid: the hamsters <i>Cricetodon kasapligili, Mirrabella crenulata, Megacricetodon hellenicus, Democricetodon doukasi, Vallaris zappai</i> and <i>Eumyarion</i> sp., the dormice <i>Glirulus ekremi</i> and <i>Glis</i> sp., the beaver <i>Steneofiber eseri</i>, the squirrel <i>Palaeosciurus fissurae</i> and Ochotonidae indet. The fauna is significant in that it represents the first common occurrence of <i>Megacricetodon</i> in Anatolia. <i>Eumyarion</i> and <i>Megacricetodon</i> are both dominant groups which may indicate a signal of environmental change, but still closer to wet conditions. This, in combination with the new species of <i>Eumyarion</i>, suggests that Beydere 3 represents a time slice which was previously not recorded in Anatolia. Radiometric dating of ashes overlying the section indicates that the age of the locality is older than 18.21 (± 0.19) Ma.
DOI: 10.6084/m9.figshare.20098893.v1
title: New ant species S<i>chismiscapus exstinctum</i> gen. et sp. nov. (Formicidae: Dolichoderinae) from Miocene Mexican amber

description: A new species of ant (Formicidae: Dolichoderinae) in Miocene Mexican amber is diagnosed and described. <i>Schismiscapus exstinctum</i> gen. et sp. nov. is recognised by having the base of scape flattened and notched; mesosoma long, narrow, and sinuous; hypostomal bridge forming a U-shaped notch without any denticule; anteromedial mesosternum convex; compound eyes positioned anteriorly on head; long post peduncle that joints with the gaster and a long spur on the hind tibiae. A phylogenetic analysis was performed to identify the position of <i>S. exstinctum</i> among dolichoderine ant genera. A close relationship with the genus <i>Leptomyrmex</i> Mayr, 1862 was revealed with both ant genera sharing a hypostomal bridge forming a U-shaped notch without any denticule. Thus, the fossil record of <i>S. exstinctum</i> in Miocene tropics of southern Mexico provides new insights into the evolutionary history of the Leptomyrmecini clade that has a probable Neotropical origin.
DOI: 10.6084/m9.figshare.19818393
title: First pterosaur from the Early Cretaceous Huajiying Formation of the Jehol Biota, northern Hebei Province, China: insights on the pedal diversity of Pterodactyloidea

description: As the lowest horizon of the Early Cretaceous Jehol Biota, the Huajiying Formation of the northern Hebei Province, China is rich with avians and feathered dinosaurs, but lacks pterosaur record. Here the first pterosaur fossil is reported from the Huajiying Formation. The new pterosaur specimen is characterised by an unusual pedal configuration of a short and spread metatarsus with elongate digits, showing a close resemblance to the dentulous Ornithocheiroidea. The pedal configuration is diverse in pterosaurs, and is often associated with ecological adaptations. In contrast to the general pattern of the elongate metatarsus and short digits, the elongate digits of the dentulous ornithocheiroids (e.g., boreopterids and istiodactylids) might offset the shortened metatarsus to enlarge the pedal surface for paddling, representing a new strategy in adaptation to the aquatic environment.
DOI: 10.6084/m9.figshare.19818393.v1
title: First pterosaur from the Early Cretaceous Huajiying Formation of the Jehol Biota, northern Hebei Province, China: insights on the pedal diversity of Pterodactyloidea

description: As the lowest horizon of the Early Cretaceous Jehol Biota, the Huajiying Formation of the northern Hebei Province, China is rich with avians and feathered dinosaurs, but lacks pterosaur record. Here the first pterosaur fossil is reported from the Huajiying Formation. The new pterosaur specimen is characterised by an unusual pedal configuration of a short and spread metatarsus with elongate digits, showing a close resemblance to the dentulous Ornithocheiroidea. The pedal configuration is diverse in pterosaurs, and is often associated with ecological adaptations. In contrast to the general pattern of the elongate metatarsus and short digits, the elongate digits of the dentulous ornithocheiroids (e.g., boreopterids and istiodactylids) might offset the shortened metatarsus to enlarge the pedal surface for paddling, representing a new strategy in adaptation to the aquatic environment.
DOI: 10.6084/m9.figshare.20051900
title: First eurhinodelphinid dolphin from the Paratethys reveals a new family of specialised echolocators

description: Eurhinodelphinids are a family of extremely long-snouted dolphins that once was widespread across the North Atlantic realm, but so far has not been recorded from the epicontinental Paratethys Sea. Here, we describe a new specimen of <i>Xiphiacetus cristatus</i>, including the cranium, left ear bones and a partial mandible, from the Middle Miocene (Badenian) of Austria. Our new fossil is the first record of this species outside the North Atlantic proper, and the first unequivocal record of eurhinodelphinids from the Paratethys. Its presence suggests a local invasion via the Mediterranean, and corroborates the persistence of an active marine gateway between the Mediterranean and the Central Paratethys throughout the Middle Miocene. Measurements of the bony labyrinth reveal that <i>X. cristatus</i> likely employed narrow-band high-frequency echolocation, making eurhinodelphinids only the second extinct odontocete family with this trait. Marked non-orthogonality of the semicircular canals suggests that <i>X. cristatus</i> was unsuited to rapid head movements, and thus more likely a benthic forager than a snap feeder.
DOI: 10.6084/m9.figshare.20051900.v1
title: First eurhinodelphinid dolphin from the Paratethys reveals a new family of specialised echolocators

description: Eurhinodelphinids are a family of extremely long-snouted dolphins that once was widespread across the North Atlantic realm, but so far has not been recorded from the epicontinental Paratethys Sea. Here, we describe a new specimen of <i>Xiphiacetus cristatus</i>, including the cranium, left ear bones and a partial mandible, from the Middle Miocene (Badenian) of Austria. Our new fossil is the first record of this species outside the North Atlantic proper, and the first unequivocal record of eurhinodelphinids from the Paratethys. Its presence suggests a local invasion via the Mediterranean, and corroborates the persistence of an active marine gateway between the Mediterranean and the Central Paratethys throughout the Middle Miocene. Measurements of the bony labyrinth reveal that <i>X. cristatus</i> likely employed narrow-band high-frequency echolocation, making eurhinodelphinids only the second extinct odontocete family with this trait. Marked non-orthogonality of the semicircular canals suggests that <i>X. cristatus</i> was unsuited to rapid head movements, and thus more likely a benthic forager than a snap feeder.
DOI: 10.5517/ccdc.csd.cc2c8ls1
title: CCDC 2183013: Experimental Crystal Structure Determination

description: Related Article: Yury V. Torubaev, Devin Howe, Gregory Leitus, Sergiy V. Rosokha|2023|CrystEngComm|25|3380|doi:10.1039/D3CE00316G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c8lt2
title: CCDC 2183014: Experimental Crystal Structure Determination

description: Related Article: Yury V. Torubaev, Devin Howe, Gregory Leitus, Sergiy V. Rosokha|2023|CrystEngComm|25|3380|doi:10.1039/D3CE00316G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.