cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29921837
title: Data for 'Variation in soil temperature predicts small seasonal shifts in daily activity patterns of a social subterranean rodent'

description: Animals often show distinct activity rhythms which may align their behaviour with favourable environmental conditions. In terrestrial species, daily and seasonal activity patterns are largely influenced by changes in photoperiod and temperature. However, subterranean animals experience weak or absent environmental variation due to minimal light exposure and reduced daily temperature fluctuations. Despite these conditions, many subterranean rodents display pronounced diel rhythms in physiological processes and locomotor activity, though the extent of seasonal variation remains unclear. In this study, we show that wild groups of subterranean Damaraland mole-rats exhibit a population-wide daily activity peak around midday. The timing of this peak shifts by approximately two hours between seasons and coincides with temperature minima at 40 cm depth. Neither individual nor group characteristics predict its occurrence and timing, suggesting that temperature fluctuations, rather than social factors, are the main driver of seasonal variation in activity timing. Although Damaraland mole-rats remain active at low levels throughout the day, they display clear diurnal foraging rhythms at the group level that change little across seasons.We utilized an RFID reader array (LID650/608, DorsetID, The Netherlands) to monitor mole-rat activity for a full calendar year. Mole-rats wree implanted with a subcutaneous transponder and released into their burrow. Animals were weighed, sexed, and assigned a reproductive class upon capture. The array was programed to scan continuously for transponder tags within range with a read delay of 3 seconds and save transponder codes with a time stamp. Thus, if an animal remained in the range of the panel for longer than 3 seconds, it would have multiple entries at 3-second intervals. The reader would then store the transponder code and the date and time. We assumed activity bouts lasted for 1 hour and animals were given an active score of 1 if a reading was detected on the array during a 60-minute period, and a score of 0 if not detected. An animal would not gain a further activity point until detected beyond the activity period. Individuals captured in the group but not recorded by the RFID reader array were assigned activity scores of zero.We modelled activity using sine-cosine waves and tested for effects of temperature, reproductive status, group size, sex, and body mass on the peak of activity. Here we present the data and R code to reproduce the results of our study.
DOI: 10.6084/m9.figshare.29921837.v2
title: Data for 'Variation in soil temperature predicts small seasonal shifts in daily activity patterns of a social subterranean rodent'

description: Animals often show distinct activity rhythms which may align their behaviour with favourable environmental conditions. In terrestrial species, daily and seasonal activity patterns are largely influenced by changes in photoperiod and temperature. However, subterranean animals experience weak or absent environmental variation due to minimal light exposure and reduced daily temperature fluctuations. Despite these conditions, many subterranean rodents display pronounced diel rhythms in physiological processes and locomotor activity, though the extent of seasonal variation remains unclear. In this study, we show that wild groups of subterranean Damaraland mole-rats exhibit a population-wide daily activity peak around midday. The timing of this peak shifts by approximately two hours between seasons and coincides with temperature minima at 40 cm depth. Neither individual nor group characteristics predict its occurrence and timing, suggesting that temperature fluctuations, rather than social factors, are the main driver of seasonal variation in activity timing. Although Damaraland mole-rats remain active at low levels throughout the day, they display clear diurnal foraging rhythms at the group level that change little across seasons.We utilized an RFID reader array (LID650/608, DorsetID, The Netherlands) to monitor mole-rat activity for a full calendar year. Mole-rats wree implanted with a subcutaneous transponder and released into their burrow. Animals were weighed, sexed, and assigned a reproductive class upon capture. The array was programed to scan continuously for transponder tags within range with a read delay of 3 seconds and save transponder codes with a time stamp. Thus, if an animal remained in the range of the panel for longer than 3 seconds, it would have multiple entries at 3-second intervals. The reader would then store the transponder code and the date and time. We assumed activity bouts lasted for 1 hour and animals were given an active score of 1 if a reading was detected on the array during a 60-minute period, and a score of 0 if not detected. An animal would not gain a further activity point until detected beyond the activity period. Individuals captured in the group but not recorded by the RFID reader array were assigned activity scores of zero.We modelled activity using sine-cosine waves and tested for effects of temperature, reproductive status, group size, sex, and body mass on the peak of activity. Here we present the data and R code to reproduce the results of our study.
DOI: 10.6084/m9.figshare.29921837.v1
title: Data for 'Daily activity rhythms vary between seasons in a wild population of social Damaraland mole-rats (<i>Fukomys damarensis</i>)

description: Animals often show distinct activity rhythms which may align their behaviour with favourable environmental conditions. In terrestrial species, daily and seasonal activity patterns are largely influenced by changes in photoperiod and temperature. However, subterranean animals experience weak or absent environmental variation due to minimal light exposure and reduced daily temperature fluctuations. Despite these conditions, many subterranean rodents display pronounced diel rhythms in physiological processes and locomotor activity, though the extent of seasonal variation remains unclear. In this study, we show that wild groups of subterranean Damaraland mole-rats exhibit a population-wide daily activity peak around midday. The timing of this peak shifts by approximately two hours between seasons and coincides with temperature minima at 40 cm depth. Neither individual nor group characteristics predict its occurrence and timing, suggesting that temperature fluctuations, rather than social factors, are the main driver of seasonal variation in activity timing. Although Damaraland mole-rats remain active at low levels throughout the day, they display clear diurnal foraging rhythms at the group level that change little across seasons.We utilized an RFID reader array (LID650/608, DorsetID, The Netherlands) to monitor mole-rat activity for a full calendar year. Mole-rats wree implanted with a subcutaneous transponder and released into their burrow. Animals were weighed, sexed, and assigned a reproductive class upon capture. The array was programed to scan continuously for transponder tags within range with a read delay of 3 seconds and save transponder codes with a time stamp. Thus, if an animal remained in the range of the panel for longer than 3 seconds, it would have multiple entries at 3-second intervals. The reader would then store the transponder code and the date and time. We assumed activity bouts lasted for 1 hour and animals were given an active score of 1 if a reading was detected on the array during a 60-minute period, and a score of 0 if not detected. An animal would not gain a further activity point until detected beyond the activity period. Individuals captured in the group but not recorded by the RFID reader array were assigned activity scores of zero.We modelled activity using sine-cosine waves and tested for effects of temperature, reproductive status, group size, sex, and body mass on the peak of activity. Here we present the data and R code to reproduce the results of our study.
DOI: 10.15468/dl.xrdgh7
title: Occurrence Download

description: A dataset containing 2817 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "Geometry POLYGON((1.50877 44.06624,1.57024 44.06624,1.57024 44.11758,1.50877 44.11758,1.50877 44.06624))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2817 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042241-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hfej2t
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Geometry POLYGON((98.57782 25.81758,98.4856 25.03059,98.27963 24.923,98.31345 24.70781,98.68849 24.10835,98.83913 24.11449,99.0451 24.20672,99.19573 24.32354,99.08813 24.56947,98.83913 25.89136,98.70386 25.86369,98.63316 25.79914,98.57782 25.81758))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Elaphodus cephalophus Milne-Edwards, 1872, Muntiacus crinifrons (Sclater, 1885), Muntiacus gongshanensis Ma, 1990, Muntiacus muntjak (Zimmermann, 1780), Muntiacus feae (Thomas & Doria, 1889), Moschus fuscus Li, 1981, Moschus berezovskii Flerov, 1929, Panthera tigris (Linnaeus, 1758), Panthera pardus (Linnaeus, 1758), Prionailurus bengalensis (Kerr, 1792), Pardofelis marmorata (Martin, 1837), Lynx lynx (Linnaeus, 1758), Profelis Severtzov, 1858, Herpestes urva (Hodgson, 1836), Prionodon pardicolor Hodgson, 1842, Paguma larvata (C.E.H.Smith, 1827), Viverra zibetha Linnaeus, 1758)",
 "Year 1950-2023"
 ]
}

 The dataset includes 10 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008631-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f7kq5m
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melanitta deglandi (Bonaparte, 1850)",
 "Geometry POLYGON((141.50 36.88,141.50 85.05,1.93 85.05,1.93 36.88,141.50 36.88))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 98 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001466-160430102343922/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oroxh9
title: Occurrence Download

description: A dataset listing the 457 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is South Africa",
 "Year 1868-1910"
 ]
}

 The dataset's 457 records were derived from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031426-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1m67vz
title: Occurrence Download

description: A dataset containing 2374 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coeligena torquata (Boissonneau, 1840)",
 "Country is Colombia"
 ]
}

 The dataset includes 2374 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001466-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u5dhc4
title: Occurrence Download

description: A dataset containing 50774193 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is iNaturalist Research-grade Observations"
 ]
}

 The dataset includes 50774193 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027630-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4vtuzm
title: Occurrence Download

description: A dataset listing the 289220 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "IucnRedListCategory is NE",
 "IucnRedListCategory is DD",
 "IucnRedListCategory is LC",
 "IucnRedListCategory is NT",
 "IucnRedListCategory is VU",
 "IucnRedListCategory is EN",
 "IucnRedListCategory is CR",
 "IucnRedListCategory is EW",
 "IucnRedListCategory is EX"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2002-2022"
 ]
}

 The dataset's 289220 records were derived from 6327 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0388490-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gjh72w
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cousinia sileracantha Kult. ex Tscherneva"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150112-230224095556074/datasets/export for details.
DOI: 10.15468/dl.wjpv5q
title: Occurrence Download

description: A dataset containing 1038 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Bothriochloa insculpta (Hochst. ex A.Rich.) A.Camus",
 "Year 1950-2021"
 ]
}

 The dataset includes 1038 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015960-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhrgr7
title: Occurrence Download

description: A dataset containing 333 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Delphinium yunnanense (Franch.) Franch."
 ]
}

 The dataset includes 333 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020432-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vsptth
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cousinia sinjarensis Rech.fil."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150118-230224095556074/datasets/export for details.
DOI: 10.15468/dl.hm5pj1
title: Occurrence Download

description: A dataset containing 241 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-106.44035 33.15135,-87.62558 33.15135,-87.62558 42.57129,-106.44035 42.57129,-106.44035 33.15135))",
 "HasCoordinate is true",
 "TaxonKey is Cystopteris tennesseensis Shaver",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 241 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033505-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yrgdmu
title: Occurrence Download

description: A dataset containing 1272 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Actualización de la base de datos de crustáceos y registro de datos de peces del pacífico mexicano de la Colección Biológica de la Secretaría de Marina (Peces)"
 ]
}

 The dataset includes 1272 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005751-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4yu2f
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sarcoglottis alexandri Schltr. ex Mansf."
 ]
}

 The dataset includes 8 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197337-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zet46m
title: Occurrence Download

description: A dataset containing 36869 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Peru",
 "TaxonKey is Orchidaceae"
 ]
}

 The dataset includes 36869 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150099-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qao89m
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bothrops lojanus Parker, 1930"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028208-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b7arkj
title: Occurrence Download

description: A dataset containing 266400 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Freshwater samples in MZNA-INV-FRW: Macroinvertebrate samples from the water quality monitoring network along the Ebro Basin"
 ]
}

 The dataset includes 266400 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005751-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fcqeen
title: Occurrence Download

description: A dataset containing 12626548 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Passer domesticus (Linnaeus, 1758)"
 ]
}

 The dataset includes 12626548 records from 1374 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064392-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hmleto
title: Occurrence Download

description: A dataset containing 7216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Sula leucogaster (Boddaert, 1783)"
 ]
}

 The dataset includes 7216 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005751-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7shwfc
title: Occurrence Download

description: A dataset containing 1789 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lopholejeunea subfusca (Nees) Schiffn."
 ]
}

 The dataset includes 1789 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084868-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p6a4wv
title: Occurrence Download

description: A dataset containing 128493 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Picus sharpei (H.Saunders, 1872)",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Country is one of (Germany, France, Spain, Portugal, Denmark, Austria, Italy, Switzerland, Greece, Poland, Hungary, Slovenia, Sweden, Norway, Slovakia, Montenegro, Croatia, North Macedonia, Serbia, Iceland, Ireland, United Kingdom of Great Britain and Northern Ireland, Albania, Bosnia and Herzegovina, Bulgaria, Belgium, Netherlands)"
 ]
}

 The dataset includes 128493 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0168400-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z4u8n7
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Septoria quercicola (Desm.) Sacc.",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is United States",
 "Country is United States of America",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0133416-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p8xhzs
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-68.40806 44.38722,-68.43432 44.38368,-68.46145 44.35772,-68.46609 44.32247,-68.46168 44.29373,-68.39514 44.22162,-68.34553 44.21235,-68.23563 44.21977,-68.18277 44.21907,-68.18694 44.25269,-68.19806 44.2944,-68.16896 44.3257,-68.17072 44.35441,-68.17318 44.38734,-68.18988 44.40293,-68.22501 44.41397,-68.23807 44.42689,-68.24995 44.43995,-68.26443 44.44397,-68.29386 44.44319,-68.31977 44.44748,-68.34614 44.43917,-68.34919 44.43326,-68.36159 44.43378,-68.37017 44.42884,-68.37173 44.42306,-68.39481 44.41222,-68.40806 44.38722))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Castor canadensis Kuhl, 1820"
 ]
}

 The dataset includes 56 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022473-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qdpytu
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Barbacenia cuspidata Goethart & Henrard"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084895-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.