cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7910/dvn/eodibr
title: Replication Data for: Application of a Bayesian approach to quantify the impact of nitrogen fertilizer on upland rice yield in sub-Saharan Africa

description: Mineral fertilizer input is indispensable to offset yield stagnation in rainfed upland rice production in sub-Saharan Africa (SSA). The present study is the first attempt to perform a meta-analysis based on a Bayesian approach with the objective of quantitatively assessing the impact of mineral fertilizer application on upland rice yield and quantifying the effects of soil type and precipitation on the yield response to mineral fertilizer application. The data were gathered from 13 field studies on the rice variety NERICA 4 in 8 SSA countries, which provided a total of 151 paired observations. The yield gain with fertilizer application (YG) varied considerably, ranging from –0.8 to 3.0 t ha−1, with an average of 0.6 t ha−1. Based on the empirical relationships among the datasets, the total precipitation during the cropping season, N fertilizer application rate, and binarized soil type (i.e., low clay [≤ 20 %] and high clay [&gt; 20 %]) were selected as key factors for the determination of YG. High clay soils exhibited higher YG than low clay soils did (i.e., 0.87 vs. 0.37 t ha−1, respectively). The relationships of YG with the N fertilizer application rate and precipitation were modeled for each soil type using a Bayesian approach. The results of the Markov chain Monte Carlo simulation indicated that greater precipitation improved YG with high credibility irrespective of soil type. Additionally, a greater rate of N fertilizer application in high clay soil also improved YG with high credibility, while its contribution to YG in low clay soil was inferior. These results highlight the need to develop a field-specific nutrient management strategy for rainfed upland rice with a focus on fine-tuning the N fertilizer input based on the soil texture and expected precipitation for improving upland rice yield and nutrient use efficiency in SSA. The Bayesian procedure offers a new approach for the meta-analysis of the yield response to mineral fertilizers as affected by biophysical factors. However, including more data points in the database and additional factors in the data analysis are warranted to improve the model predictability and reliability.
DOI: 10.25318/9810020901-eng
title: Mother tongue by age and gender: Canada, provinces and territories and federal electoral districts (2013 Representation Order)

description: Data on mother tongue, age and gender for Canada, provinces and territories and federal electoral districts.
DOI: 10.7910/dvn/ooy9kd
title: Replication Data for: Assessing the effects of management and hydro-edaphic conditions on rice in contrasting East African wetlands using experimental and modelling approaches

description: Lowland rice yields in East Africa remain low despite favourable hydro-edaphic conditions as benefits from improved cultural management vary between and within wetland types and interactions are poorly understood. Hence, multi-year agronomic field experiments were established to assess the differential responses of lowland rice to management (rainfed 0 and 60 kg N ha−1, and irrigated 120 kg N ha−1 + 60 kg PK ha−1) and field position within a floodplain in Tanzania (fringe and middle positions) and an inland valley in Uganda (valley-fringe, mid-valley and valley-bottom positions). We then calibrated and validated the Agricultural Production System Simulator (APSIM), evaluated the importance of external water table data as model input and assessed the relative effects of water and N stress on yield as affected by wetland type and field position. Yields of 3.2–9.2 Mg ha−1 were attained in the floodplain and of 1.9–6.3 Mg ha−1 in the inland valley, highlighting the substantial scope to boost yields beyond current regional means of around 2 Mg ha−1. The model estimated grain yields in both wetlands well within the experimental uncertainty during model validation (n = 12, r2 = 0.76, RMSEa= 0.92 Mg ha−1 in the floodplain; n = 18, r2 = 0.71, RMSEa= 0.72 Mg ha−1 in the inland valley). Results further emphasised the importance of external water table data for sound model performance as they evidently alleviated seasonal droughts. Simulated abiotic stress patterns additionally highlighted hydro-edaphic differences from field positioning within and between both wetlands. While low soil N was generally the main yield constraint, water stress was comparably more pronounced in the inland valley and supplemental irrigation thus more beneficial on yield. Hydro-edaphic field conditions favoured rice production in the floodplain’s fringe with comparably lower N stress, while large spatial-temporal variabilities prevented a distinct delineation based on toposequential field positions in the inland valley.
DOI: 10.6084/m9.figshare.21287820
title: GH36

description: GH36 docs
DOI: 10.6084/m9.figshare.21287820.v1
title: GH36

description: GH36 docs
DOI: 10.18112/openneuro.ds004264.v1.1.0
title: Steer the Ship
DOI: 10.6084/m9.figshare.21287826
title: GH38

description: GH38 docs
DOI: 10.6084/m9.figshare.21287826.v1
title: GH38

description: GH38 docs
DOI: 10.18743/data.00000206
title: Gillian Mezey interviewed by George Severs

description: Gillian Mezey interviewed by by George Severs, 6th May 2022. Interviewed via Zoom (online). Audio recording. The interview discusses sexual abuse and rape, specifically male victims of rape, and Mezey's psychiatric work (alongside Michael King) in this field.
description: Oral history interview method. Interviewee identified via her public written contributions to the field of male victims of rape and sexual assault. I emailed Mezey who agreed to be interviewed. Mezey remained a busy psychiatric researcher and practitioner, meaning that the time she was available for interview was short and her preference was to meet via Zoom. This interview was part of my postdoctoral project on male and HIV positive survivors of rape in Britain, which took place as part of the Sexual Harms and Medical Encounters (SHaME) project, funded by the Wellcome Trust.
DOI: 10.25318/9810020901-fra
title: Langue maternelle selon l’âge et le genre : Canada, provinces et territoires et circonscriptions électorales fédérales (Ordonnance de représentation de 2013)

description: Données sur la langue maternelle, l’âge et le genre pour le Canada, des provinces et territoires, et des circonscriptions électorales fédérales.
DOI: 10.7910/dvn/xfhil3
title: Replication Data for: Identifying farm-type specific entry points for innovations in weed management in smallholder inland-valley rice-based systems in West Africa

description: In West Africa, weeds are major production constraints in rain-fed lowland rice systems—often located in the inland valleys. Weed management technologies have been developed and promoted in such rice systems, but adoption by farmers lags behind, probably because of insufficient considerations of the system diversity or the farm-specific characteristics during technology development or promotion. This study aimed to identify farm-type specific entry points for innovations in weed management practices of smallholders in rice-based systems in inland valleys. We conducted farm surveys in the Mono Couffo region of Benin in 66 fields in 2010 and 2011 in a range of socio-economic settings typical for smallholder farms. A combination of multivariate analyses using Principal Component Analysis and Agglomerative Hierarchical Cluster is helpful in constructing farm typologies. This categorization, in turn, enables the assessment of farm-type specific weed management strategies and consequently the identification of entry points for innovation. Specific entry points for innovations in weed management include: (i) complementing the existing range of curative options by more preventive measures, (ii) diversifying the existing range of curative measures (mainly hand weeding and herbicide application) by measures that are both non-chemical and labor-saving, and (iii) improving women farmers’ access to information and inputs by targeted training endeavors and conducive credit systems.
DOI: 10.6084/m9.figshare.21287850
title: GH47

description: GH47 docs
DOI: 10.6084/m9.figshare.21287850.v1
title: GH47

description: GH47 docs
DOI: 10.18430/m37u0m
title: X-ray diffraction data for the crystal structure of a enoyl-[acyl-carrier-protein] reductase (InhA) from Mycobacterium abscessus bound to NAD and NITD-916 (7U0M)
DOI: 10.18430/m38egm
title: X-ray diffraction data for the crystal Structure of UDP-N-acetylmuramate-L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase, MurC) Pseudomonas aeruginosa in complex with compound AZ13644908 (8EGM)
DOI: 10.6084/m9.figshare.21287862
title: GH99

description: GH99 docs
DOI: 10.6084/m9.figshare.21287862.v1
title: GH99

description: GH99 docs
DOI: 10.6084/m9.figshare.21287871
title: GH113

description: GH113 docs
DOI: 10.6084/m9.figshare.21287871.v1
title: GH113

description: GH113 docs
DOI: 10.7910/dvn/d6kb2s
title: Replication Data for: Transplanting as an option to cope with abiotic stress in high‐altitude lowland rice production systems in East Africa

description: The current practice of direct seeding in East‐African high‐altitude rice farming systems is constrained by water availability early in the season and low temperatures later in the season at the crop's critical reproductive stage. Thus, productivity is restricted as only short‐duration varieties can be grown due to the risk of crop failure. To fully exploit the yield potential of such rainfed systems, the best combination of crop establishment methods and climatic ‘best fit’ genotypes is required. In this study, nine rice genotypes were evaluated under direct seeding and transplanting in the 2016 and 2017 cropping seasons with the aim of identifying genotype by environment by management combinations best fitting the high‐altitude, rainfed rice production systems. On average across all genotypes, transplanting had a positive yield effect of 18% in 2016 and 23% in 2017. Regarding the phenological development, individual phenophases were not significantly affected by transplanting relative to direct seeding; however, vegetative development stages in transplanted rice tended to be about 15% longer than when direct seeded. Even though transplanting led to extended vegetative growth, the time in the nursery allowed the plants to escape the cold spell late in the season. The results from the current study provide options to adapt cropping calendars by combining genetic resources with targeted crop management, thus improving and stabilizing yields of rainfed lowland rice farming systems at high altitude.
DOI: 10.23641/asha.21265893
title: Attention in motor speech encoding (Fournet et al., 2022)

description: <strong>Purpose:</strong> While the involvement of attention in utterance planning is well established at the conceptual and lexical levels, the attentional demands of postlexical processes are still debated. This study investigates the involvement of attentional resources on motor speech encoding during utterance production in the context of Parkinson’s disease (PD), a population allowing to assess if the attentional demands observed in a dual-task paradigm (the dual-task costs [DTCs]) are explained by postlexical difficulties and not solely by executive impairment. <strong>Method: </strong>Speech production was analyzed in a dual-task paradigm with 30 participants presenting with motor speech disorders due to hypokinetic dysarthria in the context of PD. The dual-task comprised an automatic speech task in which participants recited the days of the week and two nonverbal tasks evaluating processing speed and inhibition. The severity of dysarthria and performance in several executive tests (inhibition, verbal fluency, and cognitive shifting) were used as potential predictors of the DTCs. <strong>Results:</strong> Individuals with PD exhibited a DTC on the nonverbal tasks and on the speech task when the secondary task was inhibition (the most difficult one). Additionally, the severity of dysarthria and a poorer performance in cognitive shifting predicted a more severe DTC on speech rate. Finally, modulation of the magnitude of the DTCs was observed, depending on the difficulty of the nonverbal secondary task. <strong>Conclusion: </strong>The results suggest that, in PD, postlexical processes require attentional resources and cognitive shifting is related to dual-task performance in speech. <strong>Supplemental Material S1. </strong>Description of cognitive and speech performance for each participant. <strong>Supplemental Material S2. </strong>Model selection for the raw variable analysis. <strong>Supplemental Material S3. </strong>Model selection for word rate, syllable rate, and RTs DTC. <strong>Supplemental Material S4.</strong> Spearman rank correlations (<em>p</em>) between accuracy DTC indices and predictors. <strong>Supplemental Material S5. </strong>Correlations between speech rates in single conditions and their significant predictors in the dual-task paradigm. Fournet, M., Chiuvé, S. C., & Laganaro, M. (2022). Attentional demand of motor speech encoding: Evidence from Parkinson’s disease.<em> Journal of Speech, Language, and Hearing Research</em>. Advance online publication. https://doi.org/10.1044/2022_JSLHR-22-00096
DOI: 10.23641/asha.21265893.v1
title: Attention in motor speech encoding (Fournet et al., 2022)

description: <strong>Purpose:</strong> While the involvement of attention in utterance planning is well established at the conceptual and lexical levels, the attentional demands of postlexical processes are still debated. This study investigates the involvement of attentional resources on motor speech encoding during utterance production in the context of Parkinson’s disease (PD), a population allowing to assess if the attentional demands observed in a dual-task paradigm (the dual-task costs [DTCs]) are explained by postlexical difficulties and not solely by executive impairment. <strong>Method: </strong>Speech production was analyzed in a dual-task paradigm with 30 participants presenting with motor speech disorders due to hypokinetic dysarthria in the context of PD. The dual-task comprised an automatic speech task in which participants recited the days of the week and two nonverbal tasks evaluating processing speed and inhibition. The severity of dysarthria and performance in several executive tests (inhibition, verbal fluency, and cognitive shifting) were used as potential predictors of the DTCs. <strong>Results:</strong> Individuals with PD exhibited a DTC on the nonverbal tasks and on the speech task when the secondary task was inhibition (the most difficult one). Additionally, the severity of dysarthria and a poorer performance in cognitive shifting predicted a more severe DTC on speech rate. Finally, modulation of the magnitude of the DTCs was observed, depending on the difficulty of the nonverbal secondary task. <strong>Conclusion: </strong>The results suggest that, in PD, postlexical processes require attentional resources and cognitive shifting is related to dual-task performance in speech. <strong>Supplemental Material S1. </strong>Description of cognitive and speech performance for each participant. <strong>Supplemental Material S2. </strong>Model selection for the raw variable analysis. <strong>Supplemental Material S3. </strong>Model selection for word rate, syllable rate, and RTs DTC. <strong>Supplemental Material S4.</strong> Spearman rank correlations (<em>p</em>) between accuracy DTC indices and predictors. <strong>Supplemental Material S5. </strong>Correlations between speech rates in single conditions and their significant predictors in the dual-task paradigm. Fournet, M., Chiuvé, S. C., & Laganaro, M. (2022). Attentional demand of motor speech encoding: Evidence from Parkinson’s disease.<em> Journal of Speech, Language, and Hearing Research</em>. Advance online publication. https://doi.org/10.1044/2022_JSLHR-22-00096
DOI: 10.6084/m9.figshare.21287874
title: GH130

description: GH130 docs
DOI: 10.6084/m9.figshare.21287874.v1
title: GH130

description: GH130 docs
DOI: 10.6084/m9.figshare.21287880
title: GH134

description: GH130 docs
DOI: 10.6084/m9.figshare.21287880.v1
title: GH134

description: GH130 docs
DOI: 10.5281/zenodo.6464032
title: Evaluating deep learning for predicting epigenomic profiles

description: Datasets and static codebase to replicate figures and results from the project.
DOI: 10.5281/zenodo.6466471
title: Evaluating deep learning for predicting epigenomic profiles

description: Datasets and static codebase to replicate figures and results from the project.
DOI: 10.5281/zenodo.7153215
title: Evaluating deep learning for predicting epigenomic profiles

description: Datasets and static codebase to replicate figures and results from the project.
DOI: 10.24384/8en7-ye76
title: Learning experiences: understanding the experiences of BAME students in a post-92 university
DOI: 10.6084/m9.figshare.21287892
title: Stanford COVID-19 Hackathon Response Survey and Content Analysis

description: This dataset contains responses to a survey following a hackathon where students were tasked with coming up with solutions to mitigating COVID-19. Additionally, it contains content analysis of responses to these survey questions. This hackathon was part of the Stanford University course Biosecurity and Bioterrorism Response.
DOI: 10.57895/b2d6-8060
title: NIH Digital Health Solutions for COVID-19: Clear2Go - A Digital Identity Wallet for Health Status
title: Rapid Acceleration of Diagnostics - Digital Health Technologies (RADx-DHT)

description: Clear2Go is a solution/app that provides digital, non-refutable cryptographic proof of testing or vaccination that can be used to evaluate risk of allowing individuals to return to normal work, travel, and public life activities.
DOI: 10.57895/cmt5-gh78
title: NIH Digital Health Solutions for COVID-19: SAFER-COVID - Integration of Testing And Digital Health
title: Rapid Acceleration of Diagnostics - Digital Health Technologies (RADx-DHT)

description: SAFER-COVID provides a set of self-management tools to consumers to track symptoms, test results, vaccine record, and environmental factors such as exposure to others.
DOI: 10.6084/m9.figshare.21280461
title: It is not the virus exposure: Differentiating job demands and resources that account for distress during the Covid-19 pandemic among health sector workers (dataset)

description: Data set including data from health sector workers in five different scales
DOI: 10.6084/m9.figshare.21280461.v1
title: It is not the virus exposure: Differentiating job demands and resources that account for distress during the Covid-19 pandemic among health sector workers (dataset)

description: Data set including data from health sector workers in five different scales
DOI: 10.25921/mnr3-4169
title: EK60 Water Column Sonar Data Collected During EX2202
DOI: 10.21227/9zpv-3194
title: Handwritten Devanagari Characters Dataset –(Vowels, Consonants and Numerals) of 44,000 images for Devanagari CAPTCHA Generation and Recognition.

description: Devanagari is a phonetic script that originated from Ancient Brahmi. It is the foundation of various Indian languages. According to data from the year 2022, the Devanagari Hindi script is spoken by over 342 million people worldwide and ranks third among the top 45 languages. There are approximately 11 vowels and 33 consonants and 10 numerals in the Devanagari script. The Devanagari script has no upper-or lower-case letters and is written from left to right.The data set includes 44 handwritten Devanagari vowels, consonants, and numbers (i.e., 4 Vowels, 30 Consonants, and 10 numerals) from 63 Devanagari character sets, 19 images from the character set were eliminated to avoid confusing humans and maintain usability. The dataset is created using 44 (forty-four) distinct Devanagari characters in total.Numerals (10)Vowels (04)Consonants (30)०  १  २  ३  ४  ५  ६  ७  ८  ९अ इ उ ए क ख ग घ च  छ ज झ ट ड ढ ण त  थ  द  ध न प ब भ म य र ल व श ष स ह ळOn a Python-created canvas, the data is gathered and distributed the canvas code to more than one hundred (100+) Devanagari language native speakers of all ages, including both lefts- and right-handed computer users. Each user writes 440 characters (44 characters multiplied by 10) on the canvas and saves it on their computers. All user data is then compiled. The character on the canvas is black with a white background. No image noise is a benefit of using canvas. The total number of character images collected was 44,000 (forty-four thousand).Additionally, data is pre-processed, scaled, and kept in a place that is open to the public. The final data set contains a total of 44,000 digitized images, 10,000 Devanagari numerals (10 numerals * 1000 each), 4000 vowels (4 vowels * 1000 each), and 30,000 consonants (30 Consonants * 1000 each), after the occluded images and scribbles have been removed. Each image has a grayscale data type and is in the .jpeg format. Each image requires 1.5 kb of storage and has a resolution of 65 by 65 pixels. As a result, although just 50 MB of data storage was necessary, 162 MB of disc space was needed. Data was manually organized into the appropriate folders. Additionally.CSV (Comma Separated Values)  files with training sets (70%) and testing sets (30%) are available for the said dataset. A.zip file containing the entire data set of images is also available.
DOI: 10.7910/dvn/twc2u0
title: Replication Data for: Micro-nutrients in East African lowlands: Are they needed to intensify rice production?

description: Rice is a staple food and cash crop for smallholder farmers in sub-Saharan Africa; however, yields are very low, with indications that both macro and micro-nutrients may limit rice productivity in East Africa next to the need for good agronomic practices. Diagnostic on-farm experiments were conducted in Uganda and Tanzania between 2015 and 2017 to assess the contribution of macro, secondary and micro-nutrients on lowland rice yield and identify options by which smallholder farmers can increase productivity. All treatments included good agronomic practices combined with: zero fertilisation as a control, NPK fertilisation with and without secondary and micro-nutrients (B, Mn, Zn, Cu, Mg, S), and/or treatments where B, Mn and Zn were omitted one at a time from the NPK + secondary and micro-nutrient treatment. NPK fertilisation significantly (p &lt; 0.05) increased grain yield under irrigated condition by ca. 32 and 29 % during 2015 and 2016, and 24 and 100 % during 2016 and 2017 in Tanzania and Uganda, respectively; however, inconsistent effects were observed under rainfed condition. Observed higher yields corresponded mainly to higher panicle number with an additive effect of grains per panicle indicating major effects were at earlier growth stages supporting higher sink size development. Adding secondary and micro-nutrients to NPK enhanced yield significantly (p &lt; 0.05) under irrigated condition in Tanzania 2015 and 2016 by 7 and 11 %, respectively, while varying results were obtained under rainfed condition. In Uganda, no significant (p&gt; 0.22) effects of secondary and micro-nutrients were observed in both years and growing conditions. This study indicates that the first step to improving lowland rice productivity is proper water management, under otherwise also good crop management in terms of timely transplanting and weeding, and further yield gains can be realised with NPK fertilisation. Secondary and micro-nutrients were effective only when NPK were applied and on the fluvisols of Tanzania, and were not co-limiting yield on the plintosols of Uganda.
DOI: 10.5281/zenodo.7153343
title: A Catalog of the French Revolutionary Deists

description: A Catalog of the French Revolutionary Deists with a Short Biography of Each Deist and Information on Where to Find the Best Introduction to their Deist Ideas
description: This is a catalog of over 500 French Revolutionary Deists