cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/5f732cc14644d
title: Parkes observations for project P1058 semester 2020APRS_09

description: We propose to carry out a Parkes timing campaign of the new millisecond pulsar, J1431-6328, discovered by the Australian SKA Pathfinder (ASKAP) and Parkes Ultra-Wideband Low (UWL) receiver. PSR J1431-6328 has a spin period of 2.77 ms and is in a very wide binary system with an orbital period of 88 days. The relatively low mass of the companion and the long orbital period make this binary system extremely interesting for the understanding of binary evolution. The wide orbit of J1431-6328 also makes it useful for tests of the strong equivalence principle. The proposed program will allow us to better measure its binary parameters and to achieve more precise localisation of the pulsar, which is crucial for the optical follow-up of the system.
DOI: 10.7910/dvn/qi2t9a/fjuo2d
title: 20181003-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/jxvgjj
title: 20181003-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/cqujqy
title: 20181003-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/qsrwrm
title: 20181003-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/0pytlv
title: 20181004-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/5i1zd7
title: 20181005-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/pzqjkj
title: 20181006-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/oppfxi
title: 20181007-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/6tzkak
title: 20181008-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/d6a4zh
title: 20181009-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/wxn1uv
title: 20181010-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/bixnju
title: 20181011-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/n0rrnx
title: 20181012-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/veoqyi
title: 20181013-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/r018ez
title: 20181014-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/ytfl5u
title: 20181015-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/ugyobb
title: 20181016-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/zj8lh3
title: 20181017-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/06tazg
title: 20181018-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/sun3or
title: 20181019-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/drbixh
title: 20181020-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/fc8hdk
title: 20181021-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/icrkrd
title: 20181022-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/d7thin
title: 20181023-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/ie9z5o
title: 20181024-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/wikfny
title: 20181025-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/rnm3j5
title: 20181026-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/kwitck
title: 20181027-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/tnpnp4
title: 20181028-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/d2ksv3
title: 20181029-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/jypwv8
title: 20181030-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/bhxseu
title: 20181031-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/ofie9f
title: 20181101-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/etefay
title: 20181102-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/fcn9ln
title: 20181103-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/xp1ixb
title: 20181104-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/9otx0p
title: 20181105-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/kjhund
title: 20181106-icews-events.zip
DOI: 10.7910/dvn/qi2t9a/re9yhx
title: 20181107-icews-events.zip
DOI: 10.6084/m9.figshare.6350033
title: Additional file 2: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Table S2. Putative bovine TAD genomic coordinates. This table provides the genomic coordinates of putative bovine TADs. First and second columns (i.e. input TAD cell/tissue type and input TAD reference genome) specify the input bovine TAD set. Third, fourth and fifth columns respectively specify the chromosome number, start and end positions of the putative bovine TADs. (XLSX 495 kb)
DOI: 10.6084/m9.figshare.6350069.v1
title: Additional file 4: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Table S3. Rank and fold change of enrichment of biological hallmarks at putative bovine TAD boundaries. This table shows the level of enrichment of each biological hallmark at putative bovine TAD boundaries. The level of enrichment for each biological signal is measured by the number of base pairs that a biological signal overlapping with the TAD boundary. Presented are two types of TAD boundaries for each TAD set, differed by whether a boundary is considered present if two neighbouring putative bovine TADs overlap each other by 1 bp. “&lt; 0.0001” denotes the degree of overlap between the biological hallmark and TAD boundaries larger than all permuted cases. (A) The degrees of enrichment of all biological signals at the boundary of each TAD set are shown. (B) The degrees of enrichment of each pattern of CTCF binding motifs at the boundary of each TAD set are shown. Each motif pattern has a unique motif number defined by the FIMO output. Each best possible match motif is manually compared with the MEME-ChIP to assess whether the matched motif is previously reported. (XLSX 54 kb)
DOI: 10.6084/m9.figshare.14738589
title: Additional file 3 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 3 Table S3. Tandem duplication events of S. bicolor bHLH genes.
DOI: 10.6084/m9.figshare.14738583.v1
title: Additional file 1 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 1 Table S1. List of the 174 S. bicolor bHLH genes identified in this study.
DOI: 10.6084/m9.figshare.14738592
title: Additional file 4 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 4 Table S4. The 42 pairs of segmental duplications in S. bicolor bHLH genes.
DOI: 10.6084/m9.figshare.14738598.v1
title: Additional file 6 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 6 Table S6. Primer sequences for qRT-PCR.
DOI: 10.6084/m9.figshare.6350048
title: Additional file 3: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Appendix 1. Summary files from MEME-ChIP and FIMO. Summary file from MEME-ChIP program shows that 4 out of 82 CTCF binding motif profiles are validated in public databases of known transcription factor binding motifs, and the rest are novel CTCF binding motifs. Summary file from FIMO program shows the matched CTCF binding motifs in the bovine genome. The S2_Appendix/fimo.html and S2_Table are linked by the “motif number”, “motif width” and “best possible match” columns. (ZIP 108 kb)
DOI: 10.6084/m9.figshare.25158554
title: Hashtags used by museums Twitter accounts from REMED in 2021

description: Author: Víctor Yeste. Universitat Politècnica de Valencia.This study consists of quantitative, explanatory, and non-experimental research using inductive inference longitudinally. Thus, the use of hashtags by the Twitter accounts of the set of museums that are part of REMED is studied, and the analysis of hashtag trends by Twitter users in Spanish is performed.The primary variable is the favorite count, and it is hypothesized from this study that it is possible to predict the primary variable five weeks later. The field of study is formed by the 104 Twitter accounts of the museums that are part of REMED (Red de Museos y Estrategias Digitales).Seven analysis variables explain the information related to the use of hashtags, both in the size of the Twitter accounts of museums of the sample chosen (prefix "m_" in the variables) and Twitter users in Spanish in general (prefix "tw_" in variables). All variables represent the data in count mode, which means that they sum up the total of the data collected for each tweet of each hashtag processed:Number of tweets (variable name "num_tweets")Number of retweets (variable name "retweet_count") Number of favorites (variable name "favorite_count")Number of followers of tweeters (variable name "user_num_followers")Number of tweets published by tweeters (variable name "user_num_tweets")Age in days of tweeters' Twitter accounts (variable name "user_age")Number of tweets including a URL (variable name "url_inclusion")With the variables above, an investigation has been carried out by checking the correlations between the variables and performing a regression analysis. Thus, the relationships between the variables are ascertained and analyzed to determine if it is possible to predict the number of favorites of the hashtags used by museums. The first initial intake is presented with the suffix "_t0" in the columns, and the intake made 5 weeks later is presented with the suffix "_t1" in the columnsThis dataset has contributed to the elaboration of the book chapter:Yeste Moreno, V.; Calduch-Losa, Á.; Serrano-Cobos, J. (2022). Estudio predictivo del uso colectivo de hashtags en museos de la red REMED. En CIMED21 - I Congreso internacional de museos y estrategias digitales. Editorial Universitat Politècnica de València. 251-265. https://doi.org/10.4995/CIMED21.2021.12281
DOI: 10.6084/m9.figshare.25160954
title: Use of hashtags in Hispanic digital native media

description: Author: Víctor Yeste. Universitat Politècnica de Valencia.In this paper, we have studied the result of retweets that have used hashtags by a set of digital native media (those born from and for the online environment) Spanish and Portuguese on Twitter from the point of view of trend analysis.The field of study, therefore, is that of Twitter accounts of generalist digital native media that have been born from and for the online environment in Spain and Portugal. A sample of 96 accounts has been extracted, 48 from Spanish media and the other 48 from Portuguese press. A type of quota sampling has been used using as sources: Regulatory Entity for Social Communication (https://www.erc.pt/pt/listagem-registos-na-erc) and New Media Observatory (https//nuevosmedios.es/).This study consists of two dimensions applied to the use of each hashtag:The type of sender of the tweets: the selected set of digital native media (prefix "m_" in the variables) or the set of Twitter users in general, using for the latter the Twitter API search functionality (prefix "tw_" in the variables).The language used by the sender of each tweet: Spanish (suffix "_es" in the variables) or Portuguese (suffix "_pt" in the variables).Taking into account these dimensions, the data have been taken making use of the following analysis variables, all of them in count mode, that is, adding up the total of the data captured by each tweet in which the hashtag analyzed has been included:Tweets (variable name "num_tweets")Retweets (variable name "retweet_count")Favorites (variable name "favorite_count")Followers of tweeters (variable name "user_num_followers")Tweets published by tweeters (variable name "user_num_tweets")Age in days of tweeters' Twitter accounts (variable name "user_age")Tweets that include a URL (variable name "url_inclusion")These analysis variables have served to perform a correlative research technique, through which regression analysis is performed to determine the relationships between the variables and analyze the possibility of predicting the number of retweets. To do this, two shots were taken: an initial shot (suffix "_t0" in the variables) and a shot 14 days later (suffix "_t1" in the variables).This dataset has contributed to the elaboration of the book chapter:Yeste-Moreno, V., Calduch-Losa, Á., & Serrano-Cobos, J. (2021). Análisis predictivo colectivo del uso de hashtags en medios nativos digitales hispanos. In <i>Digital media: el papel de las redes sociales en el ecosistema educomunicativo en tiempos de Covid-19</i> (pp. 197-224). McGraw-Hill Interamericana de España.
DOI: 10.6084/m9.figshare.25160954.v1
title: Use of hashtags in Hispanic digital native media

description: Author: Víctor Yeste. Universitat Politècnica de Valencia.In this paper, we have studied the result of retweets that have used hashtags by a set of digital native media (those born from and for the online environment) Spanish and Portuguese on Twitter from the point of view of trend analysis.The field of study, therefore, is that of Twitter accounts of generalist digital native media that have been born from and for the online environment in Spain and Portugal. A sample of 96 accounts has been extracted, 48 from Spanish media and the other 48 from Portuguese press. A type of quota sampling has been used using as sources: Regulatory Entity for Social Communication (https://www.erc.pt/pt/listagem-registos-na-erc) and New Media Observatory (https//nuevosmedios.es/).This study consists of two dimensions applied to the use of each hashtag:The type of sender of the tweets: the selected set of digital native media (prefix "m_" in the variables) or the set of Twitter users in general, using for the latter the Twitter API search functionality (prefix "tw_" in the variables).The language used by the sender of each tweet: Spanish (suffix "_es" in the variables) or Portuguese (suffix "_pt" in the variables).Taking into account these dimensions, the data have been taken making use of the following analysis variables, all of them in count mode, that is, adding up the total of the data captured by each tweet in which the hashtag analyzed has been included:Tweets (variable name "num_tweets")Retweets (variable name "retweet_count")Favorites (variable name "favorite_count")Followers of tweeters (variable name "user_num_followers")Tweets published by tweeters (variable name "user_num_tweets")Age in days of tweeters' Twitter accounts (variable name "user_age")Tweets that include a URL (variable name "url_inclusion")These analysis variables have served to perform a correlative research technique, through which regression analysis is performed to determine the relationships between the variables and analyze the possibility of predicting the number of retweets. To do this, two shots were taken: an initial shot (suffix "_t0" in the variables) and a shot 14 days later (suffix "_t1" in the variables).This dataset has contributed to the elaboration of the book chapter:Yeste-Moreno, V., Calduch-Losa, Á., & Serrano-Cobos, J. (2021). Análisis predictivo colectivo del uso de hashtags en medios nativos digitales hispanos. In <i>Digital media: el papel de las redes sociales en el ecosistema educomunicativo en tiempos de Covid-19</i> (pp. 197-224). McGraw-Hill Interamericana de España.
DOI: 10.6084/m9.figshare.25161746
title: Analysis of the experience, interests, and expectations of first-year students of the UEV STEAM degrees

description: Author: Víctor Yeste. Universitat Politècnica de València. Universidad Europea de Valencia.The main objective is to analyze, using descriptive statistics, the experience, interests, and expectations of the programming languages by first-year students of the STEAM degrees of the European University of Valencia.Google Forms was chosen to evaluate students' views on programming languages and computational thinking through a question. It is a free tool that has been used in many studies, such as Haddad and Kalaani (2014), to capture the opinion of students beyond course assessment surveys, as it is straightforward, systematic, and easy to implement. It can be used through a web-based application to create online questionnaires with a friendly interface. All answers are collected using a Google Spreadsheet document stored on Google Drive. In addition, it enables the results of the questionnaire to be visualized through a statistical summary of each question and its answers.The questionnaire consisted of 19 questions, although some were subject to a specific answer to a previous question. To carry out the form, the first day of class of the subject of Fundamentals of Programming or Scientific Computing I has been chosen (depending on the degree, has a different name, even the same), specifically in the classes of 19 and 20 September 2023. It is a subject that is given in the first semester of the first year of all STEAM degrees of the European University of Valencia, which include Data Science, Physics, Engineering in Industrial Organization, and a Double Engineering Degree in Engineering in Industrial Organization and Business Administration and Management. In this subject, computational thinking is developed thanks to the study of theory and a significant practical component of programming in C++, one of today's most influential and essential programming languages (Cyganek, 2022).The questionnaire was proposed to first-year 2023-2024 students, encouraging them to participate in the first class they had on the subject and through a direct link to the questionnaire on the virtual campus, based on Canvas.This dataset has contributed to the elaboration of the book chapter:Yeste, Víctor (2024). ¿Los alumnos de STEAM saben programar al comenzar la universidad? Análisis de su experiencia, intereses y expectativas. In <i>Perspectivas Contemporáneas en Educación: </i><i>Innovación, Investigación y Transformación</i>, Dykinson S.L.
DOI: 10.34740/kaggle/dsv/7580883
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.22602928.v1
title: Additional file 2 of Nanopore sequencing for detecting reciprocal translocation carrier status in preimplantation genetic testing

description: Additional file 2.
DOI: 10.6084/m9.figshare.22602931
title: Additional file 3 of Nanopore sequencing for detecting reciprocal translocation carrier status in preimplantation genetic testing

description: Additional file 3.
DOI: 10.6084/m9.figshare.22602931.v1
title: Additional file 3 of Nanopore sequencing for detecting reciprocal translocation carrier status in preimplantation genetic testing

description: Additional file 3.
DOI: 10.6084/m9.figshare.22602928
title: Additional file 2 of Nanopore sequencing for detecting reciprocal translocation carrier status in preimplantation genetic testing

description: Additional file 2.
DOI: 10.6084/m9.figshare.25163675
title: Supplementary Material for: Liver fibrosis is associated with poorer overall survival and higher recurrence rate in patients with cholangiocarcinoma

description: Introduction
Cholangiocarcinoma is the second most common primary liver tumour worldwide with an increasing incidence in recent decades. While the effects of fibrosis on hepatocellular carcinoma have been widely demonstrated, the impact on cholangiocarcinoma remains unclear. The aim of this study is to evaluate the impact of liver fibrosis on overall survival (OS) and disease-free survival (DFS) in patients who have undergone liver resection for cholangiocarcinoma.

Method
80 patients with cholangiocarcinoma who underwent curatively intended liver surgery between January 2007 and December 2020 were included in this retrospective single-center study. Clinical and histopathological features were analyzed. The primary endpoint was cause-specific survival. Secondary endpoints were DFS and identification of prognostic factors.

Results
The present study shows that the median OS is significantly reduced in patients with fibrosis (p&lt;0.001). The median OS in patients with fibrosis was three times shorter than in the group without fibrosis. In addition, a significantly shorter DFS was observed in patients with fibrosis (p&lt;0.002). Multivariate analysis showed that fibrosis is the strongest independent factor with a negative impact on OS and DFS.

Conclusion
Liver fibrosis has a significant impact on OS and DFS in patients with cholangiocarcinoma. Patients with known liver fibrosis require thorough perioperative care and postoperative follow-up.
DOI: 10.6084/m9.figshare.25163675.v1
title: Supplementary Material for: Liver fibrosis is associated with poorer overall survival and higher recurrence rate in patients with cholangiocarcinoma

description: Introduction
Cholangiocarcinoma is the second most common primary liver tumour worldwide with an increasing incidence in recent decades. While the effects of fibrosis on hepatocellular carcinoma have been widely demonstrated, the impact on cholangiocarcinoma remains unclear. The aim of this study is to evaluate the impact of liver fibrosis on overall survival (OS) and disease-free survival (DFS) in patients who have undergone liver resection for cholangiocarcinoma.

Method
80 patients with cholangiocarcinoma who underwent curatively intended liver surgery between January 2007 and December 2020 were included in this retrospective single-center study. Clinical and histopathological features were analyzed. The primary endpoint was cause-specific survival. Secondary endpoints were DFS and identification of prognostic factors.

Results
The present study shows that the median OS is significantly reduced in patients with fibrosis (p&lt;0.001). The median OS in patients with fibrosis was three times shorter than in the group without fibrosis. In addition, a significantly shorter DFS was observed in patients with fibrosis (p&lt;0.002). Multivariate analysis showed that fibrosis is the strongest independent factor with a negative impact on OS and DFS.

Conclusion
Liver fibrosis has a significant impact on OS and DFS in patients with cholangiocarcinoma. Patients with known liver fibrosis require thorough perioperative care and postoperative follow-up.
DOI: 10.6084/m9.figshare.22602919
title: Additional file 5 of Transcriptome analysis of Citrus limon infected with Citrus yellow vein clearing virus

description: Additional file 5: Table S5. Differential expression of phytohormone-related genes in plants after CYVCV infection.
DOI: 10.6084/m9.figshare.22602910.v1
title: Additional file 3 of Transcriptome analysis of Citrus limon infected with Citrus yellow vein clearing virus

description: Additional file 3: Table S3. GO enrichment analysis of DEGs.
DOI: 10.6084/m9.figshare.22602919.v1
title: Additional file 5 of Transcriptome analysis of Citrus limon infected with Citrus yellow vein clearing virus

description: Additional file 5: Table S5. Differential expression of phytohormone-related genes in plants after CYVCV infection.
DOI: 10.6084/m9.figshare.22602922
title: Additional file 6 of Transcriptome analysis of Citrus limon infected with Citrus yellow vein clearing virus

description: Additional file 6: Table S6. Differential expression of photosynthesis-related genes in plants after CYVCV infection.
DOI: 10.6084/m9.figshare.22602913.v1
title: Additional file 4 of Transcriptome analysis of Citrus limon infected with Citrus yellow vein clearing virus

description: Additional file 4: Table S4. KEGG pathway analysis of DEGs.
DOI: 10.6084/m9.figshare.22602922.v1
title: Additional file 6 of Transcriptome analysis of Citrus limon infected with Citrus yellow vein clearing virus

description: Additional file 6: Table S6. Differential expression of photosynthesis-related genes in plants after CYVCV infection.
DOI: 10.6084/m9.figshare.6350033.v1
title: Additional file 2: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Table S2. Putative bovine TAD genomic coordinates. This table provides the genomic coordinates of putative bovine TADs. First and second columns (i.e. input TAD cell/tissue type and input TAD reference genome) specify the input bovine TAD set. Third, fourth and fifth columns respectively specify the chromosome number, start and end positions of the putative bovine TADs. (XLSX 22 kb)