cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6574450
title: Supplement to: Enhanced surveillance of monkeypox in Bas-Uélé, Democratic Republic of Congo: the limitations of symptom-based case definitions

description: This repository contains data and R code which are supplements to: <em>Enhanced surveillance of monkeypox in Bas-Uélé, Democratic Republic of Congo: the limitations of symptom-based case definitions</em><br> Gaspard Mande, Innocent Akonda, Anja De Weggheleire, Isabel Brosius, Laurens Liesenborghs, Emmanuel Bottieau, Noam Ross, Guy Crispin Gembue, Robert Colebunders, Erik Verheyen Ngonda Daulya, Herwig Leirsh, and Anne Laudisoit (2022). A data dictionary and instructions for reproducing the analysis are provided. Details can be found in the README.md file.
DOI: 10.6084/m9.figshare.20272452
title: Codificação artigos trabalhados na pesquisa

description: Codificação dos artigos selecionados para revista
DOI: 10.6084/m9.figshare.20272452.v1
title: Codificação artigos trabalhados na pesquisa

description: Codificação dos artigos selecionados para revista
DOI: 10.5281/zenodo.6576063
title: A fluidic relaxation oscillator for reprogrammable sequential actuation in soft robots

description: This dataset contains data and code to replicate main and supplemental figures for the related article published in Matter: Title: A fluidic relaxation oscillator for reprogrammable sequential actuation in soft robots DOI: 10.1016/j.matt.2022.06.002 In the article we introduce a simple and compact soft valve with intentional hysteresis, analogous to an electronic relaxation oscillator. By integrating the valve with a soft actuator, we transform a continuous inflow to cyclic activation. Importantly, we show that our circuits can activate up to five actuators in various sequences, and that we can physically reprogram the activation order by varying the (initial) conditions in the fluidic circuit. Moreover, we show the feasibility of our approach under more realistic conditions by building a four-legged robot. This dataset contains measurement data and simulation files. The data are recorded (in human-readable format) from experiments on our fluidic circuits (e.g., pressure, flow data), and are accompanied by MATLAB scripts for data processing as well as generating figures. The simulation files are MATLAB and LTspice files for simulating our fluidic circuits making use of the analogy with electronic circuits. For more involved parameter sweeps we generate, run, and post-process LTspice input and result files using MATLAB. More details and instruction for use are provided in the included readme.txt files.
DOI: 10.5281/zenodo.6576062
title: A fluidic relaxation oscillator for reprogrammable sequential actuation in soft robots

description: This dataset contains data and code to replicate main and supplemental figures for the related article published in Matter: Title: A fluidic relaxation oscillator for reprogrammable sequential actuation in soft robots DOI: 10.1016/j.matt.2022.06.002 In the article we introduce a simple and compact soft valve with intentional hysteresis, analogous to an electronic relaxation oscillator. By integrating the valve with a soft actuator, we transform a continuous inflow to cyclic activation. Importantly, we show that our circuits can activate up to five actuators in various sequences, and that we can physically reprogram the activation order by varying the (initial) conditions in the fluidic circuit. Moreover, we show the feasibility of our approach under more realistic conditions by building a four-legged robot. This dataset contains measurement data and simulation files. The data are recorded (in human-readable format) from experiments on our fluidic circuits (e.g., pressure, flow data), and are accompanied by MATLAB scripts for data processing as well as generating figures. The simulation files are MATLAB and LTspice files for simulating our fluidic circuits making use of the analogy with electronic circuits. For more involved parameter sweeps we generate, run, and post-process LTspice input and result files using MATLAB. More details and instruction for use are provided in the included readme.txt files.
DOI: 10.5517/ccdc.csd.cc20194j
title: CCDC 1848286: Experimental Crystal Structure Determination

description: Related Article: Wen-Tong Chen|2020|J.Solid State Chem.|284|121160|doi:10.1016/j.jssc.2019.121160
description: Related Article: Wei Wang, Wei-Feng Wen, Chang-Song Liu, Li-Fa He, Yu Zhang, Su-Li Yang, Wen-Tong Chen|2020|J.Solid State Chem.|291|121623|doi:10.1016/j.jssc.2020.121623
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc232jd4
title: CCDC 1938845: Experimental Crystal Structure Determination

description: Related Article: Ge Huang, Li Yang, Qi Yin, Zhi-Bin Fang, Xiao-Jing Hu, An-An Zhang, Jun Jiang, Tian-Fu Liu, Rong Cao|2020|Angew.Chem.,Int.Ed.|59|4385|doi:10.1002/anie.201916649
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc232jf5
title: CCDC 1938846: Experimental Crystal Structure Determination

description: Related Article: Ge Huang, Li Yang, Qi Yin, Zhi-Bin Fang, Xiao-Jing Hu, An-An Zhang, Jun Jiang, Tian-Fu Liu, Rong Cao|2020|Angew.Chem.,Int.Ed.|59|4385|doi:10.1002/anie.201916649
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23g0vg
title: CCDC 1949895: Experimental Crystal Structure Determination

description: Related Article: SAMPATHKUMAR PONGIAPPAN, SRINIVASAN KARUPPANNANAN|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc242jb3
title: CCDC 1968634: Experimental Crystal Structure Determination

description: Related Article: Feng Hu, Jiao-Jiao Li, Zong-Jie Guan, Shang-Fu Yuan, Quan-Ming Wang|2020|Angew.Chem.,Int.Ed.|59|5312|doi:10.1002/anie.201915168
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29d0g6
title: CCDC 2126707: Experimental Crystal Structure Determination

description: Related Article: Jun Zheng, Yue Ma, Xinan Yang, Peihua Ma|2022|RSC Advances|12|18736|doi:10.1039/D2RA02459D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29d0mc
title: CCDC 2126712: Experimental Crystal Structure Determination

description: Related Article: Jun Zheng, Yue Ma, Xinan Yang, Peihua Ma|2022|RSC Advances|12|18736|doi:10.1039/D2RA02459D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29d0nd
title: CCDC 2126713: Experimental Crystal Structure Determination

description: Related Article: Jun Zheng, Yue Ma, Xinan Yang, Peihua Ma|2022|RSC Advances|12|18736|doi:10.1039/D2RA02459D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29d10s
title: CCDC 2126724: Experimental Crystal Structure Determination

description: Related Article: Jun Zheng, Yue Ma, Xinan Yang, Peihua Ma|2022|RSC Advances|12|18736|doi:10.1039/D2RA02459D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.14845185
title: Sequences of the OTUs

description: This file contains the representative sequences of each OTUs, as the output from the UPARSE pipeline.
DOI: 10.6084/m9.figshare.14845185.v2
title: Sequences of the OTUs

description: This file contains the representative sequences of each OTUs, as the output from the UPARSE pipeline.
DOI: 10.6084/m9.figshare.14845185.v1
title: Sequences of the OTUs

description: This file contains the representatives sequences of each OTUs, as the output from the pipeline.
DOI: 10.6084/m9.figshare.20272545
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-6 geochemistry
DOI: 10.6084/m9.figshare.20272545.v1
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-6 geochemistry
DOI: 10.6084/m9.figshare.20272563.v1
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-4-SHRIMP
DOI: 10.6084/m9.figshare.20272572
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-3-LA-ICP-keda
DOI: 10.6084/m9.figshare.20272572.v1
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-3-LA-ICP-keda
DOI: 10.6084/m9.figshare.20272554
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-2-LA-Jamescook
DOI: 10.6084/m9.figshare.20272581
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-1-sample list
DOI: 10.6084/m9.figshare.20272581.v1
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-1-sample list
DOI: 10.6084/m9.figshare.20272587.v1
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-5-lu-hf
DOI: 10.6084/m9.figshare.20272587
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-5-lu-hf
DOI: 10.5281/zenodo.6811452
title: Experimental data set for hydraulic fracture interactions with discontinuities study

description: Experimental data included in hydraulic fracture interaction with discontinuities study. The original images in high resolution and the pressure and cumulative acoustic emission activities recordings.
DOI: 10.5281/zenodo.6451910
title: Experimental data set for hydraulic fracture interactions with discontinuities study

description: Experimental data included in hydraulic fracture interaction with discontinuities study. The original images in high resolution and the pressure and cumulative acoustic emission activities recordings.
DOI: 10.6084/m9.figshare.14845182
title: OTU table

description: OTUs recovered in the experimental microcosms as generated from the UPARSE pipeline, with the clustur_otus command (threshold identity = 97%) <br> The Original raw reads are available in the European Nucleotide Archive (PRJEB45614)
DOI: 10.6084/m9.figshare.14845182.v2
title: OTU table

description: OTUs recovered in the experimental microcosms as generated from the UPARSE pipeline, with the clustur_otus command (threshold identity = 97%) <br> The Original raw reads are available in the European Nucleotide Archive (PRJEB45614)
DOI: 10.6084/m9.figshare.14845182.v1
title: OTU table

description: OTUs detected in the microcosms.Description of the Pipeline to produce the OTUs is available in Le Moigne et al., 2020 (Environmental Microbiology, 22(11).The Original raw reads are available in the European Nucleotide Archive (PRJEB45614)
DOI: 10.6084/m9.figshare.20079926
title: CoIP analysis MS data.xlsx

description: Processed data of Mass spectrometry-based proteomics data
DOI: 10.6084/m9.figshare.20272554.v1
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-2-LA-Jamescook
DOI: 10.6084/m9.figshare.20079926.v4
title: CoIP analysis MS data.xlsx

description: Processed data of Mass spectrometry-based proteomics data
DOI: 10.6084/m9.figshare.20079926.v3
title: CoIP analysis MS data.xlsx

description: Raw and processed data of Mass spectrometry-based proteomics data
DOI: 10.6084/m9.figshare.14845179.v1
title: Substrate concentrations

description: Evolution of Substrates concentration over time in each microcosms.
DOI: 10.6084/m9.figshare.20115920.v1
title: Superimposed vibration on suspended push-up

description: This spreadsheet provides OMNI-Res, effect size, percentage change and the raw data of muscle activity of different upper limb muscles assessed in a suspended push-up with superimposed vibration.
DOI: 10.6084/m9.figshare.20272563
title: Multiple volcanic episodes of the Kermanshah forearc basin, SW Iran: a record of the deactivation and re-initiation of Neotethyan subduction involving a mid-oceanic ridge

description: supplementary table S-4-SHRIMP
DOI: 10.6084/m9.figshare.14845173
title: Growth features

description: Growth features calculated from a Baranyi model from the dataset "cell_abundances"
DOI: 10.6084/m9.figshare.14845173.v2
title: Growth features

description: Growth features calculated from a Baranyi model from the dataset "cell_abundances"
DOI: 10.6084/m9.figshare.14845173.v1
title: Growth features

description: Growth features calculated from a Baranyi model from the dataset "cell_abundances"
DOI: 10.6084/m9.figshare.14845167
title: Cell Abundances

description: The dataset represents the evolution of the cell abundance / mL over time in each of the microcosms. The design of the experiment is available in the linked paper
DOI: 10.6084/m9.figshare.14845167.v2
title: Cell Abundances

description: The dataset represents the evolution of the cell abundance / mL over time in each of the microcosms. The design of the experiment is available in the linked paper
DOI: 10.6084/m9.figshare.14845167.v1
title: Cell Abundances

description: The dataset represents the evolution of the cell abundance / mL over time in each of the microcosms. The design of the experiment is available in the linked paper
DOI: 10.5519/qd.gubsc04f
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (21 records)
DOI: 10.5281/zenodo.6811484
title: Exploring Activity and Contributors on GitHub: Who, What, When, and Where

description: Supplementary materials.
DOI: 10.5281/zenodo.6811483
title: Exploring Activity and Contributors on GitHub: Who, What, When, and Where

description: Supplementary materials.
DOI: 10.6084/m9.figshare.20272602
title: OTU taxonomy table

description: This dataset contains the taxonomy assignment of the OTUs found in the experimental microcosms. The assignement was realised with the SINTAX algorithm and with the non-redundant SILVA SSU database (version 138). The second part of the taxonomic classification cuts assigment that were under the bootstrapp threshold of 80%.
DOI: 10.6084/m9.figshare.20272602.v1
title: OTU taxonomy table

description: This dataset contains the taxonomy assignment of the OTUs found in the experimental microcosms. The assignement was realised with the SINTAX algorithm and with the non-redundant SILVA SSU database (version 138). The second part of the taxonomic classification cuts assigment that were under the bootstrapp threshold of 80%.
DOI: 10.25573/data.20263857
title: (high-temp) Data for publication figures

description: Data to reproduce all Main, Extended Data, and Supplementary figures in the publication. The complete workflow can be accessed at https://sweltr.github.io/high-temp/pub.html
DOI: 10.25573/data.20263857.v1
title: (high-temp) Data for publication figures

description: Data to reproduce all Main, Extended Data, and Supplementary figures in the publication. The complete workflow can be accessed at https://sweltr.github.io/high-temp/pub.html
DOI: 10.5281/zenodo.6807623
title: Pyrene fluorescence data obtained by nonadiabatic dynamics calculations

description: The dataset includes all trajectories of the nonadiabatic molecular dynamics simulations of pyrene. Each tar.gz directory contains two directories: INPUT and RESULTS. In the INPUT directory, one has the input files for the Newton-X dynamics calculations and the subdirectory JOB_AD with the inputs for the ADC(2) calculations with TURBOMOLE. One also has the files "final_output.1.2" and "final_output.1.3" with the data used to obtain the emission spectrum. In the RESULTS directory, one has the 20 trajectories for the S2 state and 52 trajectories initiated in S7-S8. For the latter, the trajectories numbered 1-32 started in S7, and those numbered 33-52 started in S8. One also has a directory called TRAJ1_uncorrected that corresponds to the data for TRAJ1 without the kinetic energy correction. The RESULTS directory contains all the output files from the Newton-X dynamics calculation, including the file dyn.out with the atomic coordinates, velocities, and energies for each time step. There is also a file called "get_points.py," a python script used to extract the data (from the dyn.out files) for the emission spectrum.
description: Acknowledgments: S.M and M.B. thank the European Research Council (ERC) advanced grant SubNano (Grant agreement 832237) and the Centre de Calcul Intensif d'Aix-Marseille. E.V. thanks the Brazilian agencies CAPES for funding the grant through the Capes/PrInt project (Grant number 88887.467063/2019-00). E.V. and S. A. M. thank the Brazilian agency CNPq (Grant Numbers 423112/2018-0, 308371/2021-6 and 310123/2020-8) for support. I. B. thanks the Brazilian agencies CNPq (Grant numbers 304148/2018-0 and 409447/2018-8) and Faperj (Grant number E26/201.197/2021) for support.
DOI: 10.21227/z7r4-1y38
title: Three complete datasets recorded without any face cover, with a face mask, and with a respirator: A) Model Directory; B) Data Directory

description:  A. The set of files for processing of thermal images, blood oxygen data, and heart rate signals Model.m – main file ResultsNN21.mat – records from image labeler (links to thermal images and ROI bounding boxes)O2face.xlsx - records of blood oxygen and heart rate from OximeterVideoData directory - directory with the set of thermal images B. The set of directories to test blood oxygen concentration data, heart rate signals, and thermal data without and face cover, with face mask and respirator 1. UncoveredFace directory – directory with data for uncovered face2. FaceMask directory – directory with data for the use of a face mask3. Respirator directory – directory with data for the use of a respirator Each directory contains the following subdirectories: &gt;&gt; OXIMETER directory – directory with a CSV file of blood oxygen concentration and heart rate data&gt;&gt; MATLAB directory  -  directory with accelerometric data&gt;&gt; THERMALCAMERA directory - directory with a  video file from the thermal camera
DOI: 10.34740/kaggle/ds/2327358
title: OpenStreetMap: India Cities and Towns
DOI: 10.6069/f52e-ez90
title: Quantification of organelle membrane contact site protein abundances during infection with human viruses

description: Viruses rely on organelles to invade, replicate, and spread between host cells. Likewise, organelles underlie the host's ability to sense and respond to pathogen invasion. To subvert cellular functions and turn them to the benefit of virus production and spread, viruses remodel organelle structure and function during infection. We predicted that membrane contact sites (MCSs) underlie virus-driven organelle remodeling events. MCSs use protein interactions to bridge organelle membranes for the direct transfer of biomolecules, coordinating fundamental organelle dynamics. The extent of contact and potential functions of MCSs are dictated by the abundance of MCS-specific proteins at organelle interfaces. 

Here, we design a parallel reaction monitoring (PRM) targeted MS assay to quantify MCS protein abundances across time and space. Our assay encompasses nearly all MCS functions and all major cellular organelles (ER, mitochondria, peroxisome, endosomes, lysosomes, autophagosomes, lipid droplets, plasma membrane, Golgi), with 2-5 signature peptides per protein and internal controls. Utilizing MCS-PRM, we uncover temporal- and organelle-specific regulation of MCSs during the infectious cycles of critical human viruses: the beta-herpesvirus human cytomegalovirus (HCMV, also known as HHV-5), herpes simplex virus type 1 (HSV-1), the orthomyxovirus influenza A (Infl. A PR8), and the beta-coronavirus HCoV-OC43.
DOI: 10.6084/m9.figshare.20079917
title: Data Figures

description: Numerical source data of graphs and charts
DOI: 10.6084/m9.figshare.20079917.v2
title: Data Figures

description: Numerical source data of graphs and charts
DOI: 10.6084/m9.figshare.20079917.v1
title: Data Figures

description: Numerical source data of graphs and charts
DOI: 10.26300/eqwp-9635
title: SR-39-0002 Site Investigation and Remediation Document Collection:: Plat D5, Block 28, Lot 12, 153 Hamlet Avenue, Woonsocket, Rhode Island, 02895
DOI: 10.6084/m9.figshare.20272668
title: database

description: Database of the extraction.
DOI: 10.6084/m9.figshare.20272668.v1
title: database

description: Database of the extraction.