cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3620138_d24
title: Additional file 21: of The cold responsive mechanism of the paper mulberry: decreased photosynthesis capacity and increased starch accumulation

description: The mean, SD and CV of 38 differential proteins with significant variance. The protein No. is corresponding to the description in Fig.Â 6. (XLSX 22Â kb)
DOI: 10.6084/m9.figshare.c.3620213_d12
title: Additional file 8: Table S4. of The Trichoderma atroviride putative transcription factor Blu7 controls light responsiveness and tolerance

description: List of the most responsive genes present only in the WT or the ∆blu7 mutant strains. (CSV 9 kb)
DOI: 10.17863/cam.69631
title: Research data supporting "Dynamics of driven polymer transport through a nanopore"

description: This research data supports “Dynamics of driven polymer transport through a nanopore” which is published in “Nature Physics”. The data set contains the data for each figure in the paper in the corresponding folder (Figure 1 – Figure 5). It also includes all the ionic current signals for single DNA translocations measured with all the nanopores used in the paper. Data for each measurement is in a single folder with the pore name, and the statistics and experimental conditions are listed in an Excel file named “List of the nanopores”.
DOI: 10.6084/m9.figshare.c.3620240_d1
title: Additional file 5: of Candidate effectors contribute to race differentiation and virulence of the lentil anthracnose pathogen Colletotrichum lentis

description: Primers used to construct pSilent-Dual 1-ClToxB construct. Underline sites are EcoRV restriction sites and used to clone ClToxB ORF into the plasmid pSilent-Dual 1. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3620246_d1
title: Additional file 8 of Automated detection of ncRNAs in the draft genome sequence of a colonial tunicate: the carpet sea squirt Didemnum vexillum

description: Fasta file and tabular file of ambiguously miRNAs candidates on D. vexillum. (ALL 1.66 kb)
DOI: 10.17863/cam.62935
title: Research data supporting "Gesture Knitter: A Hand Gesture Design Tool for Head-Mounted Mixed Reality Applications"

description: Data corresponding to experiments described in "Gesture Knitter: A Hand Gesture Design Tool for Head-Mounted Mixed Reality Applications". The zipped folder participant_data.zip contains the raw hand tracking files for each of the eight participants. This includes the fine primitive gesture (for both hands), the gross gestures (right and left hands), the one-handed and two-handed complex gestures, the continuous online recognition data for one-handed and two-handed gestures, as well as the designed primitive and complex gesture if that individual participated in Study 2, the design study. The raw data includes the x, y, z coordinates and the quaternions qx, qy, qz, and qw for each of the time series steps of the hand trajectory. The tracked elements are as follows: cam -&gt; camera palm -&gt; plm wrist -&gt; wrs thumb -&gt; th index -&gt; in middle -&gt; mi ring -&gt; ri pinky -&gt; pi The character "r" or "l" joined to the end of any of the above abbreviations denotes the right and left hands respectively. CHI2021_Gesture_Knitter_supporting_data.xlsx contains the processed data derived from the raw data. It represents the recognition rates for each of the cases examined in our recognition experiments - training with all the primitive data, cross-validation results, as well as the recognition results from the synthetic data generation. The user study questionnaire sheet shows the user responses to the post-study questionnaire conducted in the design study. The decoding text files (decoding_one_hand.txt, decoding_two_hand.txt, and online_recognition.txt) contain the output of the decoder when fed the various complex gesture traces. The number at the end of each decoding output is the edit distance to the correct declaration. The online results show the output of the online recognition experiment with gestures that are misclassified, false activations, or failure to recognize a gesture within that time frame.
DOI: 10.17863/cam.71288
title: Data and code for "Topological invariance in whiteness optimisation"

description: This resource contains the raw spectra and code with examples how to synthesize and characterize the disordered structures used in investigations. In the sim_data.zip file the first folder, (reflectance/) contains the raw spectra R1-384.dat (in ASCII format) for reflectance simulations with refractive index of n=1.5. The lookuptable_reflectance.xlsx spreadsheet contain the corresponding Minkowksi values. Files R385-524.dat contain the spectra for structures with n=1.1 and n=2.6. In the the second folder (transmittance_meanfreepath/) the files T525-1941.dat and TE_525-1941.dat contain the transmittance and the ballistic transmittance spectra for the mean free path simulations, and the details are provided in the lookuptable_transmittance.xlsx spreadsheet. lam.dat contains the corresponding wavelength values for all the raw spectra. The code.zip contains a struct_synth/ folder for examples (Matlab files *.m) on how to simulate, analyse, and export disordered structures. The minkowski/ folder has an example python code how calculate the Minkowski values. Finally the fdtd/ folder contains examples how to import structures to Ansys Lumerical FDTD simulation software.
DOI: 10.17863/cam.14328
title: Data in support of "In Situ Chemically-Selective Monitoring of Multiphase Displacement Processes in a Carbonate Rock using 3D Magnetic Resonance Imaging"

description: This work was part funded by Royal Dutch Shell and whilst the techniques are suitable for publication, the acquired data is commercially confidential. Anyone wishing to have some of the data made available to them should contact the corresponding author in the first instance though it is likely that a suitable legally enforceable non-disclosure agreement will need to be in place before release of data.
DOI: 10.17863/cam.88327
title: Research Data Supporting "A Minimal Coherent Receiver for 200 Gb/s/λ PON Downstream with Measured 29 dB Power Budget"

description: The processed data was obtained by analising captured oscilloscope traces using offline digital signal processing (DSP) in Matlab. The DSP contains carrier frequency recovery and adaptive equalizer based on least-mean squares. The sensitivity is taken at BER = 10^-2. Power budget is a combination of sensitivity and launch power, taken at the EDFA output. Optical Spectrum analyser power measurement raw data. Text file contains power measurement for each frequency
DOI: 10.17863/cam.24844
title: Raw X-ray data for Cucurbit[7]uril-FeCl₃·6H₂O complex

description: The laboratory data are collected on a Bruker D8-Quest diffractometer with a Cu microsource and Photon-100 detector. Images are in native Bruker .sfrm format, and can be processed using the APEX2/3 software. The data AP113 were collected on Beamline I19 (EH1) at Diamond Light Source. The images are provided in the native Rigaku format and converted to Bruker .sfrm format.
DOI: 10.17863/cam.82775
title: Research data supporting "Automated Rational Design of Metal-Organic Polyhedra"

description: Input files containing cleaned curated data. Output files, geometry files and ontologies files generated as part of the work. Pease see readme document for details
DOI: 10.6084/m9.figshare.c.3620246_d7
title: Additional file 2 of Automated detection of ncRNAs in the draft genome sequence of a colonial tunicate: the carpet sea squirt Didemnum vexillum

description: Fasta file of Final ncRNA candidates on D. vexillum. (PDF 51 kb)
DOI: 10.17863/cam.34839
title: Data for "A new route to the efficient metalation of unfunctionalized aromatics"

description: Crystallographic and NMR spectroscopic data for compounds and reaction mixtures. SHELX crystallography software or similar can be used to access X-ray (.cif) data. FIDs are included and files (.mnova) can be opened with MestReNova NMR processing software or similar.
DOI: 10.6084/m9.figshare.c.3620255_d1
title: Additional file 8: of Transcriptome analysis reveals regional and temporal differences in mucosal immune system development in the small intestine of neonatal calves

description: DE miRNA information used for this study. Sheet 1. DE miRNAs in the jejunum. Sheet 2. DE miRNAs in the ileum. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.c.3620258_d1
title: Additional file 8: Table S4. of Differential gene network analysis for the identification of asthma-associated therapeutic targets in allergen-specific T-helper memory responses

description: Upregulated and differentially expressed genes in the HDM-sensitized atopics with asthma compared to HDM-nonsensitized controls. Differential network analysis of the responses in HDM-sensitized atopics with asthma versus HDM-nonsensitized controls identified genes with upregulated expression and coexpression (region 3, P = 0.0009) patterns in the asthmatic group. Genes identified were exclusively from the blue module (Fig. 6a). (XLS 32 kb)
DOI: 10.6084/m9.figshare.c.3620246_d8
title: Additional file 6 of Automated detection of ncRNAs in the draft genome sequence of a colonial tunicate: the carpet sea squirt Didemnum vexillum

description: Fasta file with contigs of the genome assembly that match the mitogenome. (FA 24 kb)
DOI: 10.6084/m9.figshare.c.3620255_d2
title: Additional file 1: of Transcriptome analysis reveals regional and temporal differences in mucosal immune system development in the small intestine of neonatal calves

description: DAVID function of commonly expressed genes in the jejunum and ileum. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.c.3620258_d2
title: Additional file 2: Table S2. of Differential gene network analysis for the identification of asthma-associated therapeutic targets in allergen-specific T-helper memory responses

description: Fifty most significant differentially expressed genes in HDM-stimulated versus resting CD4 T cells from HDM-sensitized atopics without asthma. We compared gene expression changes in HDM-stimulated and unstimulated CD4 T cells from HDM-sensitized atopics without asthma. Here are the 50 most significant differentially expressed genes. (XLS 34Â kb)
DOI: 10.17863/cam.96503
title: Dataset for: Static versus dynamic muscle modelling in extinct species: A biomechanical case study of the Australopithecus afarensis pelvis and lower extremity

description: Abstract: The force a muscle generates is dependent on muscle structure, in which fibre length, pennation angle and tendon slack length all influence force production. Muscles are not preserved in the fossil record and these parameters must be estimated when constructing a musculoskeletal model. Here, we test the capability of digitally reconstructed muscles of the Australopithecus afarensis model (specimen AL 288-1) to maintain an upright, single-support limb posture. Our aim was to ascertain the influence that different architectural estimation methods have on muscle specialisation and on the subsequent inferences that can be extrapolated about limb function. Parameters were estimated for 36 muscles in the pelvis and lower limb and seven different musculoskeletal models of AL 288-1 were produced. These parameters represented either a ’static’ Hill-type muscle model (n=4 variants) which only incorporated force, or instead a ‘dynamic’ Hill-type muscle model with an elastic tendon and fibres that could vary force-length-velocity properties (n=3 variants). Each muscle’s fibre length, pennation angle, tendon slack length and maximal isometric force were calculated based upon different input variables. Static (inverse) simulations were computed in which the vertical and mediolateral ground reaction forces (GRF) were incrementally increased until limb collapse (simulation failure). All AL 288-1 variants produced somewhat similar simulated muscle activation patterns, but the maximum vertical GRF that could be exerted on a single limb was not consistent between models. Three of the four static-muscle models were unable to support &gt;1.8 times body weight and produced models that under-performed. The dynamic-muscle models were stronger. Comparative results with a human model imply that similar muscle group activations between species are needed to sustain single-limb support at maximally applied GRFs in terms of the simplified static simulations (e.g., same walking pose) used here. This approach demonstrated the range of outputs that can be generated for a model of an extinct individual. Despite mostly comparable outputs, the models diverged mostly in terms of strength. Dataset description: This dataset is comprised of the Au afarensis opensim model, the bone geometries and all predicted muscle parameters, including the relevant calculations used to predict the muscle parameters. All files are contained within a zipped folder. Please see the "read me" text file contained within the zipped folder for further information.
DOI: 10.6084/m9.figshare.c.3620255_d3
title: Additional file 7: of Transcriptome analysis reveals regional and temporal differences in mucosal immune system development in the small intestine of neonatal calves

description: The temporally DE analysis for the immune-related genes. Sheet 1. Temporally DE immune-related genes list in the jejunum. Sheet 2. KEGG pathway analysis of Temporally DE immune-related genes in the jejunum. Sheet 3. Temporally DE immune-related genes list in the ileum. Sheet 4. KEGG pathway analysis of Temporally DE immune-related genes in the ileum. (XLSX 45Â kb)
DOI: 10.6084/m9.figshare.c.3620258_d3
title: Additional file 11: Table S7. of Differential gene network analysis for the identification of asthma-associated therapeutic targets in allergen-specific T-helper memory responses

description: Transcription factor target enrichment of asthma-associated genes. We compared HDM driven responses in HDM-sensitized atopics with asthma versus HDM-sensitized atopics without asthma using differential network analysis. The resulting gene list was analysed using Enrichr showing that these asthma-associated genes were enriched with targets of STAT6 signaling. (XLS 29Â kb)
DOI: 10.6084/m9.figshare.c.3620255_d4
title: Additional file 6: of Transcriptome analysis reveals regional and temporal differences in mucosal immune system development in the small intestine of neonatal calves

description: The KEGG pathway of regional DE immune-related genes. (XLSX 34Â kb)
DOI: 10.6084/m9.figshare.c.3620258_d4
title: Additional file 9: Table S5. of Differential gene network analysis for the identification of asthma-associated therapeutic targets in allergen-specific T-helper memory responses

description: Asthma associated genes identified via differential network analysis of CD4 T cell responses to HDM. Genes with both upregulated expression and coexpression patterns (region 3, P = 0.0009) were identified in the HDM-sensitized atopics with asthma compared to HDM-sensitized atopics without asthma using differential network analysis. Genes identified were exclusively from the blue module (Fig. 6b) with the exception of *PRPS1 (brown module). (XLS 29 kb)
DOI: 10.6084/m9.figshare.c.3620270_d1
title: Additional file 1: of Logic regression-derived algorithms for syndromic management of vaginal infections

description: R code for logic regression-derived algorithms for syndromic diagnosis of vaginal infections. (TXT 4 kb)
DOI: 10.6084/m9.figshare.c.3620264_d2
title: Additional file 3: Table S2. of Evolution of the EKA family of powdery mildew avirulence-effector genes from the ORF 1 of a LINE retrotransposon

description: Peptides present en each protein accession. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.27183681
title: Supplementary_Material_Pupil_Size_Changes_Task_Demand_Emotional_Content

description: Raw Pupil Data of clinical interview
DOI: 10.6084/m9.figshare.27183681.v3
title: Supplementary_Material_Pupil_Size_Changes_Task_Demand_Emotional_Content

description: Raw Pupil Data of clinical interview
DOI: 10.6084/m9.figshare.c.3620255_d5
title: Additional file 5: of Transcriptome analysis reveals regional and temporal differences in mucosal immune system development in the small intestine of neonatal calves

description: All the immune-related gene list. (XLSX 1650Â kb)
DOI: 10.6084/m9.figshare.27183681.v2
title: Raw_Pupil_Changes_Interview

description: Raw Pupil Data of clinical interview
DOI: 10.6084/m9.figshare.c.3620276_d1
title: Additional file 1: of Spatio-temporal regulation of circular RNA expression during porcine embryonic brain development

description: Spatio-temporal expression of circRNAs. CircRNAs detected with a minimum of two reads in one or more samples and with a mapping quality of 40 at both termini (anchors). Table 1 shows circular RNAs in whole porcine forebrain at E23 and porcine cortex from E42 until E115. Table 2 shows circRNAs in porcine basal ganglia, brain stem, cerebellum, cortex and hippocampus at E60 and E115. (XLS 4106 kb)
DOI: 10.18150/jqzwjw
title: Raw data: Organic recycling challenges of (bio)degradable packages: Degradation studies of polylactide/cork composites

description: The drastic increase in the amount of packaging waste from conventional plastics, caused by improper waste management, is a serious challenge for the planet. It is therefore worth considering how we can solve this problem. Thus, it is necessary to develop new polymeric materials that retain the functional properties of traditional plastics but are susceptible to degradation with the participation of microorganisms. The development of new eco-friendly materials requires a holistic approach in terms of their disposal. Organic recycling enables the disposal of biodegradable packaging along with food remains that are difficult to remove. The article presents a study on the degradation of biocomposites of polylactide with cork in various environments (water, buffer, and compost). The obtained results indicate a clear influence of the presence of the filler and its amount on the degradation profile of the composites. In addition, the effect of sample shrinkage was observed, especially during degradation in water, where the pH decreases during the process due to the appearance of degradation products. This effect may be important not only for the degradation profile of the packaging but also during its use. Packaging distorted due to shrinkage may be a sign of improper product storage.
DOI: 10.6084/m9.figshare.c.3620264_d3
title: Additional file 2: Table S1. of Evolution of the EKA family of powdery mildew avirulence-effector genes from the ORF 1 of a LINE retrotransposon

description: Mass spectometric data results for proteomic analysis using the database of predicted EKA proteins merged with the Bgh DH14 protein database. (XLSX 33 kb)
DOI: 10.17863/cam.65896
title: Microscope images and spectral data for article: Using structural colour to track length scale of cell-wall layers in developing Pollia japonica fruits

description: Microscope images and raw spectral data for all time points and all cells of each maturation set.
DOI: 10.17863/cam.94396
title: Scottish ICeM RDnum to ConRD dictionary, 1851‒1901

description: This dataset provides a dictionary to link registration district identifiers in Integrated Census Microdata - ICeM (Rdnum) to consistent registration districts (ConRD), 1851-1901. More information is provided in the README document on the first worksheet in the Excel file.
DOI: 10.17863/cam.107667
title: Research Data supporting "Ultra-high spin emission from antiferromagnetic FeRh"

description: Legend: S* is the THz emission normalised by THz outcoupling (microVolts). Msat is the saturation magnetisation (emu/cm^3), measured by SQUID, T is temperature (Kelvin), S*_y is the component of S* polarised in the plane of the FeRh film, perpendicular to the applied field, S*_x is the component of S* polarised in the plane of the FeRh film, parallel to the applied field, B_c (Tesla) is the coercive field, B_ex (Tesla) is the exchange field. 1(b) – contains the data of the temperature dependence of S* and Msat. Col(A)=temperature, Col(B)=S*, Col(C)=temperature (K), Col(d)=Msat. 1(c) – contains the temperature dependence of S* for two pumping geometries in the FeRh-Pt sample. Col(A)=temperature, Col(B)=S*_y when the sample is pumped from the Pt layer side, Col(c)=temperature, Col(d)=S*_y when the sample is pumped from the MgO substrate side, Col(e)=temperature, Col(f)=S*_x when the sample is pumped from the Pt layer side. 1(d) - contains the temperature dependence of S* for two pumping geometries in the FeRh single layer. Col(A)=temperature, Col(B)=S*_y when the sample is pumped from the top surface side, Col(c)=temperature, Col(d)=S*_y when the sample is pumped from the MgO substrate side. 2(a) – contains the magnetic field dependence of S*_y in the FeRh-Pt sample for different temperatures. Col(A)=temperature, Col(b)= S*_y at 100 K, Col(c)= S*_y at 200 K, Col(d)= S*_y at 300 K, Col(e)= S*_y at 400 K. 2(b) – contains the decomposition of S*_y measured in FeRh-Pt at 860 mT into linear-in-field and saturating components. Col(A)= temperature, Col(B)=linear-in-field component, Col(C)= saturating component, Col(D)= sum of the two components. 2(c) – contains the temperature dependence of S*_y in FeRh-Pt measured for different applied fields. Col(A)=temperature, Col(B)=2.2 mT, Col(C)=temperature, Col(D)=46 mT, Col(E)=temperature, Col(F)=245 mT, Col(G)=temperature, Col(H)=860 mT, Col(I)=temperature, Col(J)=22 mT, Col(K)=temperature, Col(L)=0 mT. 2(d)- contains data extracted from the SQUID measurements on the FeRh-Pt sample. Col(A)=temperature, col(B)=B_c (mT), Col(C)=temperature, col(D)=B_ex (mT), Col(E)=temperature, col(F)=M_sat (emu/cm^3). 3(a) – contains the temperature dependence of S*_y measured in FeRh-Pt as a function of FeRh conductivity. Main: Col(A)=conductivity of FeRh (S/m x106), col(B):S*_y. Insert: Col(A)=temperature, Col(B)= conductivity of FeRh (S/m x106). 3(b) – Col(A)=temperature, Col(B)=M_sat, col(C)=temperature, Col(D)=S*_y divided by FeRh conductivity for FeRh-Pt sample The folder “correction function” contains the correction function used to calculate S* from the amplitude of the emitted THz (S) for the uncapped FeRh sample and FeRh-Pt.
DOI: 10.17863/cam.21484
title: LocVis: Local visibility maps of artifacts and distortions in images

description: The data set contains pairs of distorted and reference images with the associated maps indicating in which part of an image the distortions are visible.
DOI: 10.34740/kaggle/dsv/10172434
title: job-skill-set
DOI: 10.17863/cam.74476
title: Research data supporting Universal Digital Twin – the impact of heat pumps on social inequality

description: Source files containing the ontologies introduced in the paper to describe fuel poverty and electrical energy consumption. Full size images of figures from publication.
DOI: 10.17863/cam.26245
title: Research data supporting: Porous AlGaN-based ultraviolet distributed Bragg reflectors.

description: Research data and original images are provided in support of the publication “Porous AlGaN-based ultraviolet distributed Bragg reflectors”. The dataset includes the sample structures and the electrochemical setup as illustrated in Figure 1. The Atomic Force Microscopy images of the sample A and B were included before and after the electrochemical etching as presented in Figure 2. Cross sectional scanning electron microscope images of sample A and B are included as presented in Figure 3 and 4. The original reflectivity spectra data (.xls) used to plot the graphs in Figure 5 are also provided.
DOI: 10.6084/m9.figshare.c.3620258_d11
title: Additional file 10: Table S6. of Differential gene network analysis for the identification of asthma-associated therapeutic targets in allergen-specific T-helper memory responses

description: Expression of asthma-associated genes in CD4 T cell responses to HDM in the three clinical groups. Asthma-associated genes were identified by differential network analysis (Fig.Â 6b). Log Fold Change values are derived from comparison of HDM treated versus untreated CD4 T cells from each group. (XLSX 60Â kb)