cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23629056
title: <strong>Mobilome characterization of the beetle </strong><em><strong>Euchroma gigantea</strong></em><strong> (Buprestidae) uncovers multiple long range </strong><em><strong>Tc1-Mariner</strong></em><strong> horizontal transfer events</strong>

description: Transposable elements (TEs) are mobile repetitive DNA sequences that can transfer horizontally between species. Due to their mutagenic characteristics, TEs are associated with different evolutionary events, including chromosomal rearrangements that are abundant in the beetle <em>Euchroma gigantea</em>. In order to understand more in depth the impact of TEs on the genomic evolution of <em>E. gigantea</em>, we characterized the <em>E. gigantea mobilome</em> and evaluated the horizontal transfer transmission mode of <em>Tc1-Mariner</em> elements. Genomic sequencing data was generated on the Illumina Hiseq plataform, from a specimen (Northeast lineage) collected in Recife, Pernambuco - Brazil. The TEs were characterized by two independent approaches based on the clustering and assembly of highly repetitive sequences, the RepeatExplorer and dnaPipeTE. The sequences obtained were further characterized using ORFfinder and CD-Search, to obtain the TEs’ potential coding amino acids and verify the presence and integrity of known TE domains. Evidence for horizontal transfer was evaluated by nucleotide and protein genetic distance between TEs from <em>E. gigantea</em> and other species and phylogenetic incongruences detected between TEs and hosts phylogenetic trees. The mobilome of <em>E. gigantea</em> represents about 21 to 26% of its genome. This mobilome is composed of TEs from 31 superfamilies, belonging to different classes and most known orders of TEs. Several types of TEs with intact domains were observed with emphasis on <em>Tc1-Mariner</em> suggesting the presence of potentially autonomous elements. This superfamily also stands out for having the greatest abundance and diversity, with TEs being classified into four families. When compared to TEs deposited in databases, <em>Mariner</em> TEs stood out as having the highest aminoacid similarity (above 90%) with TEs from phylogenetically distant species, such as ants, bees and flies. Altogether these results suggest that <em>E. gigantea Mariner </em>TEs underwent multiple horizontal transfer events to other insect species.
DOI: 10.6084/m9.figshare.23629056.v1
title: <strong>Mobilome characterization of the beetle </strong><em><strong>Euchroma gigantea</strong></em><strong> (Buprestidae) uncovers multiple long range </strong><em><strong>Tc1-Mariner</strong></em><strong> horizontal transfer events</strong>

description: Transposable elements (TEs) are mobile repetitive DNA sequences that can transfer horizontally between species. Due to their mutagenic characteristics, TEs are associated with different evolutionary events, including chromosomal rearrangements that are abundant in the beetle <em>Euchroma gigantea</em>. In order to understand more in depth the impact of TEs on the genomic evolution of <em>E. gigantea</em>, we characterized the <em>E. gigantea mobilome</em> and evaluated the horizontal transfer transmission mode of <em>Tc1-Mariner</em> elements. Genomic sequencing data was generated on the Illumina Hiseq plataform, from a specimen (Northeast lineage) collected in Recife, Pernambuco - Brazil. The TEs were characterized by two independent approaches based on the clustering and assembly of highly repetitive sequences, the RepeatExplorer and dnaPipeTE. The sequences obtained were further characterized using ORFfinder and CD-Search, to obtain the TEs’ potential coding amino acids and verify the presence and integrity of known TE domains. Evidence for horizontal transfer was evaluated by nucleotide and protein genetic distance between TEs from <em>E. gigantea</em> and other species and phylogenetic incongruences detected between TEs and hosts phylogenetic trees. The mobilome of <em>E. gigantea</em> represents about 21 to 26% of its genome. This mobilome is composed of TEs from 31 superfamilies, belonging to different classes and most known orders of TEs. Several types of TEs with intact domains were observed with emphasis on <em>Tc1-Mariner</em> suggesting the presence of potentially autonomous elements. This superfamily also stands out for having the greatest abundance and diversity, with TEs being classified into four families. When compared to TEs deposited in databases, <em>Mariner</em> TEs stood out as having the highest aminoacid similarity (above 90%) with TEs from phylogenetically distant species, such as ants, bees and flies. Altogether these results suggest that <em>E. gigantea Mariner </em>TEs underwent multiple horizontal transfer events to other insect species.
DOI: 10.6084/m9.figshare.23629053
title: <strong>The Impact of Enlargement on the Speed of Legislative Process </strong> - data set

description: Data set on duration of EU legislative procedures.
DOI: 10.6084/m9.figshare.23629053.v1
title: <strong>The Impact of Enlargement on the Speed of Legislative Process </strong> - data set

description: Data set on duration of EU legislative procedures.
DOI: 10.5281/zenodo.4982489
title: Resilience at School

description: International (Germany, Greece, and Switzerland) longitudinal (2019-2022) study on school resilience of migrant and refugee students.Codebook and metadata along DDI standard.
DOI: 10.5281/zenodo.8117195
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Arthur Wilkins Deselm, http://www.wikidata.org/entity/Q120355600. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q120355600
DOI: 10.5281/zenodo.8117194
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Arthur Wilkins Deselm, http://www.wikidata.org/entity/Q120355600. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q120355600
DOI: 10.5281/zenodo.8117197
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Friedrich Sellow, http://www.wikidata.org/entity/Q76159. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q76159
DOI: 10.25934/pr00009040
title: Genomic surveillance of Antimicrobial resistance Data challenge

description: Title: Genomic Surveillance of Antimicrobial Resistance Data Challenge

Background:

Antibiotic resistance is a global health crisis that is jeopardizing the safety of patients and also our ability to treat bacterial infections effectively. The impact of Antibiotic resistance is significant in Low- and middle-income countries (LMICs), leading to Increased mortality and morbidity rates. The WHO ESKAPE group is the priority pathogens, as they have developed mechanisms to resist the most commonly used Antibiotics.

Summary of the Proposed Research: 

This study aims at the Surveillance and Monitoring aspect by analyzing resistance profile data and identifying resistance trends at a regional level, where this information contributes to identifying hotspots of resistance and the prevalence of outbreaks.

With data generated, the following outcomes are expected:

Infection Control Measures: The analysis of beta-lactamase resistance profile data in India is vital for guiding infection control measures. Understanding their patterns and prevalence helps identify high-risk areas and patient populations. This enables targeted infection prevention and control strategies, including enhanced surveillance. It also supports more effective infection control measures and the specific challenges posed by beta-lactamase-mediated resistance in healthcare settings.
Antimicrobial Stewardship: The analysis of resistance patterns specific to India will support the development of evidence-based treatment guidelines and customized antimicrobial stewardship programs. By analyzing the resistance profiles of pathogens commonly found in India, healthcare providers can identify the most effective antibiotics for treating specific infections in the Indian context. The findings will help prevent the misuse of antibiotics and optimize their use.

Conclusion: 
The proposed research on Genomic surveillance of Antimicrobial resistance enables us to identify resistance trends specific to the Indian region. The findings from this study contribute to data that can help in targeted infection prevention strategies such as contact and outbreak prevention that can be implemented both in the Hospital and in Community.
DOI: 10.17903/fk2/jlflw8
title: The Earthquake in Volos

description: During the period 1954-1957 there was a series of devastating earthquakes and floods that leveled much of the city of Volos and became the starting point for rebuilding the urban center. This research, which is part of the wider context of 'disaster anthropology', was intended to document the experiences of residents from this event.
DOI: 10.4119/unibi/2980553
title: BIFL - Bielefelder Fragebogen zur Lebenszufriedenheit

description: Der Bielefelder Fragebogen zur Lebenszufriedenheit (BIFL) dient der ökonomischen Erfassung der Ausprägung von Lebenszufriedenheit in verschiedenen Lebensbereichen unter Berücksichtigung ihrer persönlichen Bedeutsamkeit. Der BIFL wurde rational-deduktiv konzipiert, die Itemauswahl sowie die Entwicklung der Skalen erfolgte auf Basis einer theoretischen Recherche sowie empirischer Ergebnisse bewährter Fragebogenverfahren und erfahrungsbasierter Einschätzungen erfahrener Psychotherapeut*innen. Mit dem Selbstbeurteilungsinstrument wird für 18 verschiedene Lebensbereiche über zwei sechsstufige Likert-Skalen die Zufriedenheit mit dem jeweiligen Lebensbereich sowie dessen Bedeutsamkeit erhoben. Zusätzlich erfolgt eine Einschätzung der Zufriedenheit mit dem Leben insgesamt. Die Bearbeitung des Fragebogens dauert ca. 5 - 10 Minuten. Die Auswertung des Fragebogens ermöglicht die Berechnung der Lebenszufriedenheit auf Itemebene, für die verschiedenen Lebensbereiche und eines allgemeinen Lebenszufriedenheitscores.
DOI: 10.5281/zenodo.7538111
title: GCM output on early Mars

description: GCM output on early Mars
DOI: 10.5281/zenodo.7538112
title: GCM output on early Mars

description: GCM output on early Mars
DOI: 10.17903/fk2/qrck3l
title: Ziakas, Little Moscow of Grevena

description: Ethnography of the community of Ziaka Grevena for the 1940s. It explores the meaning that the residents of the village gave to EAM's message in the civil war that followed the liberation. Key to the interpretation were the events of the interwar period and the politicization of the inhabitants through the lines of the Rural Party and the KKE. After the end of the Civil War, almost all residents settled as political refugees in Eastern Europe. During the research, most people had returned to Greece.
DOI: 10.5281/zenodo.7871635
title: Sentinel2-NOAA Water Edges Dataset (SNOWED)

description: An automatically built dataset of labelled satellite images for sea-land segmentation and shoreline detection. The dataset is built using shoreline data from the National Oceanic and Atmospheric Administration (NOAA) and satellite images from Copernicus Sentinel 2 project.
DOI: 10.5281/zenodo.7871636
title: Sentinel2-NOAA Water Edges Dataset (SNOWED)

description: An automatically built dataset of labelled satellite images for sea-land segmentation and shoreline detection. The dataset is built using shoreline data from the National Oceanic and Atmospheric Administration (NOAA) and satellite images from Copernicus Sentinel 2 project.
DOI: 10.5281/zenodo.8117241
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Philipp Salzmann, http://www.wikidata.org/entity/Q2329444. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q2329444
DOI: 10.48323/g20xq-b5d11
title: MS_Eclipse_2023_June
DOI: 10.5281/zenodo.8105397
title: Data for 'Exciton transport in a germanium quantum dot ladder' by Tzu-Kan Hsiao et al.

description: Data for 'Exciton transport in a germanium quantum dot ladder' by Tzu-Kan Hsiao et al.
DOI: 10.5281/zenodo.8105396
title: Data for 'Exciton transport in a germanium quantum dot ladder' by Tzu-Kan Hsiao et al.

description: Data for 'Exciton transport in a germanium quantum dot ladder' by Tzu-Kan Hsiao et al.
DOI: 10.5281/zenodo.7953110
title: Suppl. Data for AKI-to-CKD_human-mouse

description: Suppl. Data for AKI-to-CKD_human-mouse
DOI: 10.5281/zenodo.7953109
title: Suppl. Data for AKI-to-CKD_human-mouse

description: Suppl. Data for AKI-to-CKD_human-mouse
DOI: 10.5281/zenodo.8117256
title: Suppl. Data for AKI-to-CKD_human-mouse

description: Suppl. Data for AKI-to-CKD_human-mouse
DOI: 10.21965/ijhbhta.2023.001
title: Des tutoriels en ligne pour enseigner l’économie de la santé aux gestionnaires des services de santé, chercheurs non-économistes, cliniciens et patients partenaires
DOI: 10.6084/m9.figshare.16832518
title: Single-cell dissection of aggression in honeybee colonies

description: Understanding how genotypic variation results in phenotypic variation is especially difficult for collective behaviour because group phenotypes arise from complex interactions among group members. A genome-wide association study identified hundreds of genes associated with colony-level variation in honeybee aggression, many of which also showed strong signals of positive selection, but the influence of these ‘colony aggression genes’ on brain function was unknown. Here, we use single-cell (sc) transcriptomics and gene regulatory network (GRN) analyses to test the hypothesis that genetic variation for colony aggression influences individual differences in brain gene expression and/or gene regulation. We compared soldiers, which respond to territorial intrusion with stinging attacks, and foragers, which do not. Colony environment showed stronger influences on soldier-forager differences in brain gene regulation compared to brain gene expression. GRN plasticity was strongly associated with colony aggression, with larger differences in GRN dynamics detected between soldiers and foragers from more aggressive relative to less aggressive colonies. The regulatory dynamics of subnetworks composed of genes associated with colony aggression genes were more strongly correlated with each other across different cell types and brain regions relative to other genes, especially in brain regions involved with olfaction and vision and multimodal sensory integration, which are known to mediate bee aggression. These results show how group genetics can shape a collective phenotype by modulating individual brain gene regulatory network architecture.
DOI: 10.5281/zenodo.8117307
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Robert Frederick Inger, http://www.wikidata.org/entity/Q3435155. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3435155
DOI: 10.5281/zenodo.8117306
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Robert Frederick Inger, http://www.wikidata.org/entity/Q3435155. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3435155
DOI: 10.15132/10000220
title: Deaths – National Records Scotland

description: Cause of death data from National Records Scotland (NRS, formerly General Registrar Office (GRO) and contains data relating to the causes of death of patients.
description: This data can be used to identify causes of death. As this data does not originate from the health service, it is not originally CHI seeded. From approx. 2015 onwards, the data was supplied with CHI number, though only covering around 95% of the data. Prior to 2015, and for those records supplied with no CHI an automated mechanism which identifies over 90% of the records is used to CHI seed. This is further augmented by manual data entry.
DOI: 10.5281/zenodo.8117315
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by George P. Kanakoff, http://www.wikidata.org/entity/Q120336808. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q120336808
DOI: 10.5281/zenodo.8117314
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by George P. Kanakoff, http://www.wikidata.org/entity/Q120336808. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q120336808
DOI: 10.6073/pasta/bd4f4a90fe4942c10aedd978f81d3b09
title: Ecosystem metabolism and associated environmental data for a forested, meadow and reforested reach of White Clay Creek, Chester Co., Pennsylvania; 1971-1975 and 1997-2010

description: Ecosystem metabolism data for a 3rd-order Piedmont stream were collected during two periods: P1- April 1971 – Dec 1975, and P2- May 1997 – January 2010. Measures were made in a meadow and a forested reach during each period and in a reforested (formerly meadow) reach during the latter years of P2. During P1, measures were made by transferring streambed substrata to chambers in water jackets located on the streambank and measuring dissolved oxygen changes over diel periods. During P2, open system measures of dissolved O2 change were made for several days in warm and cold seasons, with reaeration determined from a propane injection experiment. Metabolism estimates were determined from diel curves of dissolved O2 change. Photosynthetically active radiation (PAR) and chlorophyll were measured concurrent with many measurements in P1 and all measures during P2, and temperature with all measures. Water chemistry parameters (NH4-N, NO3-N, PO4-P, SiO2, Cl, SO4, total alkalinity, pH) associated with each run are included in the data set, as are days since storm of various thresholds. Field procedures, analytical methods and data analyses are detailed in Bott, T.L. & J. D. Newbold, 2023. A multi-year analysis of factors affecting ecosystem metabolism in forested and meadow reaches of a Piedmont Stream. Hydrobiologia
DOI: 10.5281/zenodo.8041056
title: Microbiome enhanced addiction - data

description: Data produced by simulations for figures
DOI: 10.5281/zenodo.8041055
title: Microbiome enhanced addiction - data

description: Data produced by simulations for figures
DOI: 10.6084/m9.figshare.22693495
title: SRAM Startup Patterns of Embedded Devices

description: This dataset contains startup samples of un-initialized SRAMs embedded on different microcontrollers. <br> <strong>Format</strong> Per-device there is a .tar.gz file containing ~1000 samples of SRAM startup patterns, in .txt files showing the hexadecimal values of the bytes. <br> <strong>Devices</strong> There is an aditional .csv file with two columns: device, usage. Usage represents the approximated usage time of the device in months. - m3-xxx devices are IoT-LAB M3 boards, featuring an ST STM32F103REY microcontroller. - fmc20-xxx devices are boards featuring a Microchip ATXMega128A1 microcontroller.
DOI: 10.48579/pro/fzefme/aedmim
title: README.txt

description: :unav
DOI: 10.48579/pro/fzefme/iyrzqh
title: MNHN.F.B09711 overview.rti

description: :unav
DOI: 10.48579/pro/fzefme/db1y8q
title: SNSB-BSPG 1908 I 49.rti

description: :unav
DOI: 10.48579/pro/fzefme/uvedks
title: SMNS Grauvogel collection 7885 wing base flipped horizontally.rti

description: :unav
DOI: 10.5517/ccdc.csd.cc2b8rw8
title: CCDC 2153380: Experimental Crystal Structure Determination

description: Related Article: Chun-Hua Gong, Zhi-Bing Sun, Man Cao, Xi-Ming Luo, Jie Wu, Qian-You Wang, Shuang-Quan Zang, Thomas C. W. Mak|2022|Chem.Commun.|58|9806|doi:10.1039/D2CC03120E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6073/pasta/76485c69d1282aa3de2c5250ee149f50
title: Regional Distribution and Abundance of Eastern Hemlock in Eastern North America 2010

description: We developed comprehensive maps on the distribution and abundance of hemlock for the purposes of mapping the host distribution, and modeling the spread, of the hemlock woolly adelgid. Multiple statistical models were used to map the distribution of hemlock. Hemlock occurrence data were taken from the FIA database and multiple environmental predictors were gathered from various databases as described in methods. The raster map depicts the predicted abundance of hemlock m2 basal area per hectare) across its range in eastern North America.
DOI: 10.5281/zenodo.8108201
title: MetalResistance - Collection of metal resistance genes

description: <strong>MetalResistance database of genes providing resistance towards heavy metals</strong> The sequences encoding the proteins in BacMet 1.1 (experimentally confirmed) were supplemented with a number of genes identified through screening of research articles using search terms. For more details, see the methods section of the study: <strong>ARGfinder - a pipeline for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets</strong> This collection of metal resistance genes were used in the construction of the PanRes database
DOI: 10.5281/zenodo.8108200
title: MetalResistance - Collection of metal resistance genes

description: <strong>MetalResistance database of genes providing resistance towards heavy metals</strong> The sequences encoding the proteins in BacMet 1.1 (experimentally confirmed) were supplemented with a number of genes identified through screening of research articles using search terms. For more details, see the methods section of the study: <strong>ARGfinder - a pipeline for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets</strong> This collection of metal resistance genes were used in the construction of the PanRes database
DOI: 10.17903/fk2/emjw2v
title: Greek Immigrants to Germany

description: It contains 5 interviews with Greek immigrants and immigrant women in Germany (2 women and 3 men), recording the post-war difficulties that led them to migration, the transition from rural life to industrial work, and the problems of returning to Greece. The purpose of the research was also to compare the post-war Greek migration to Germany with the experience of Albanian immigrants in Greece (Collection No 2). On the basis of this comparison, the students produced a radio show entitled "Journey to Infinity", which was broadcast on the then Municipal Radio.
DOI: 10.5281/zenodo.8117407
title: Chapter 4-Table 4.3

description: <strong>List of mutated genes detected. </strong>