cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15151/esrf-es-968511974
title: Synergic role of pH and pigment's protonation state on the structure of amorphous calcium carbonate during its crystallization using pair di

description: Amorphous calcium carbonate (ACC) is an important metastable phase involved in the biomineralization processes used by organisms to form their skeletal parts. Although the pigmentation mechanisms are yet poorly known, color changes were observed from red, when the coloring polyhydroxylated naphthoquinone (PHNQ) molecules are synthesized in the cells to dark purple when they are occluded within the calcite phase. We propose that pH plays a crucial role in these color changes as the PHNQ’s protonation state leads to color from red to blue. Similarly, the analogue molecules (naphthazarin and juglone) we plan to use in this study, change color according to pH. Thus, we aim at measuring the local structural rearrangement occurring during the crystallization of ACCs synthesized at different pH (8-12.6) in the presence of the pigment molecules. This, will evidence the synergic role of pH and pigment’s ionic form on ACC stability and crystallization pathways.
DOI: 10.15151/esrf-es-968512771
title: Effect of magnetic and crystal structure transformation in the metastable multi-valent La0.5Ba0.5CoO2.87 modified by pulsed huge-field

description: We suppose that accurate temperature dependent high-resolution X-ray powder diffraction (XPD) measurements in order to study an unusual effect of crystal structure transformation just metastable(!) multi-valence(!) La0.5Ba0.5CoO2.87 modified by pulsed magnetic field 20 Tesla. The combination of XPD results with and neutron diffraction (HRPT, PSI, accepted proposal 20212847) will give us the opportunity to establish the correlations between crystal and magnetic structure changes and clarify the origin of magneto-structural phase transition near the paramagnetic(PM) → ferromagnetic(FM)→antiferromagnetic(AFM) spin-state transitions, as well as to provide an input for a novel modeling methods [1-4] based on the density functional theory (DFT, DFT+U, DFT+U+SO) and the dynamic mean-field theory (DFT+DMFT).
DOI: 10.15151/esrf-es-969290780
title: Stresses in Mixed Lithium Ion Battery Cathodes

description: All-solid-state lithium ion batteries are promising due to high safety and energy density, but suffer from fatigue caused by mechanical stresses. Based on an experimental microstructure of a mixed cathode (LiCoO2/Li7La3Zr2O12: LCO/LLZO), we calculated the thermal stresses after manufacturing and the electrochemical stresses after charging to study the impact of microstructural parameters (LCO contents and relative density) on the stresses yielding a stress-optimised structure. Here, these stresses in complex cathode materials and their homogeneity will be measured including the two different stress components of manufacturing and charging. In addition, the stress development over the electrochemical cycling will be measured which will confirm the role of stresses in the degradation behaviour in traditional and optimised cells. This will be the first direct crystallographic stress measurement and it will help to overcome a remaining main issue of these batteries.
DOI: 10.15151/esrf-es-1012016625
title: Study of the degradation of Cadmium Yellow in historical and historically reconstructed oil paints

description: This proposal concerns the study of the composition and degradation of Cadmium Yellow (CdY) oil paints in relation to the historical synthesis methods of the pigment. Although the degradation mechanism of CdY paints has been elucidated, it has been demonstrated that not all CdY paints show the same extent of degradation. This fact can be related to the use of different historical synthesis methods, which influence the pigment properties and could induce a different reactivity of the pigment. We propose to characterize through µ-XRF/µ-XANES analysis the chemical speciation and stratigraphic distribution of compounds in artificially aged CdY model paints prepared with pigments synthesized by different historical methods, to provide a quantitative assessment of the degree of degradation in relation with the manufacturing process. The research will complement the study of historical paint samples from original CdY degraded paintings, to compare artificial degradation with real one.
DOI: 10.17632/dtmtd3ytsd.1
title: Candida Ag vs DPCP warts

description: Photos of patients before and after treatment with immunotherapy using cnadida antigen injection and DPCP application, as well as photos of the side effects for both modalities
DOI: 10.5281/zenodo.7328929
title: Wikidata Dump full_wiki_dump

description: RDF dump of wikidata produced with wdumper.<br>View on wdumper<b>entity count<b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0</b></b>
DOI: 10.5281/zenodo.7328928
title: Wikidata Dump full_wiki_dump

description: RDF dump of wikidata produced with wdumper.<br>View on wdumper<b>entity count<b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0</b></b>
DOI: 10.17632/pn9mrhp5f7.1
title: Mendeley Supplementary Table 1 for "Single-institution retrospective study evaluating personal history of rosacea and risk of basal cell carcinoma of the face"

description: Location of basal cell carcinoma (BCC) by history of rosacea among patients with a BCC diagnosis at Brown Dermatology (2016-2020)
DOI: 10.17632/gttn89vbpn.1
title: Chromatin-associated YTHDC1 coordinates heat-induced reprograming of gene expression

description: Summary of the paper:
Heat stress (HS) induces a cellular response leading to profound changes in gene expression. Here, we show that human YTHDC1, a reader of N6-methyladenosine (m6A) RNA modification, mostly associates to the chromatin fraction, and that HS induces a redistribution of YTHDC1 across the genome, including to heat-induced heat shock protein (HSP) genes. YTHDC1 binding to m6A-modified HSP transcripts co-transcriptionally promotes expression of HSPs. In parallel, hundreds of the genes enriched in YTHDC1 during HS have their transcripts undergoing YTHDC1- and m6A-dependent intron retention. Later, YTHDC1 concentrates within nuclear stress bodies (nSBs) where it binds to m6A-modified SATIII non-coding RNAs (ncRNAs), produced in a HSF1-dependent manner upon HS. These findings reveal that YTHDC1 plays a central role in a chromatin-associated m6A-based reprograming of gene expression during heat stress. Furthermore, they support the model where the temporary sequestration of YTHDC1 within nSBs subsequently calibrates the timing of this YTHDC1-dependent gene expression reprograming. 
Cell Reports 2022
DOI: 10.17632/kds9sb4z6t.1
title: RawData_NTA_FTLD

description: Nanoparticle Tracking Analysis (NTA) data are obtained from EVs isolated from 172 human plasma samples, from patients with sporadic FTLD (n=40), with FTLD due to C9orf72 expansion (n = 9 C9orf72 intermediate expansion carriers; n = 31 C9orf72 pathological expansion carriers), with FTLD due to pathogenic mutations in GRN (n = 46 heterozygous mutation carriers), with NCL due to pathogenic mutation in GRN (n= 3 GRN homozygous null mutation carriers) and subjects with normal cognitive function, as control group (n = 43). Moreover, a negative control was included in the analysis (ctrl_neg). Samples were analyzed with Nano-Sight NS300 Instrument (Malvern, Worchestershire, UK). For each sample, 5 video of 60 seconds duration were recorded and data were processed using NanoSight NTA Software 3.2 (Malvern, Worchestershire, UK). Correspondence_RawData table shows sample code, category as diagnostic group, age and the corresponding raw file name. Raw data of each sample analyzed consists of .csv file generated by Nano-Sight NS300 Instrument. File contains information about EVs concentration (particles/ml, particles/frame), size (mean, mode, SD) and size distribution (D10, D50 and D90).
DOI: 10.17632/ggjkchtbfk.1
title: Cotton Facemask archives

description: snapshots; pictures and related binary data for digital area measurements.
DOI: 10.5281/zenodo.7386788
title: Occitania-Transportation Mode

description: Occitania Transport Mode (OCC-TM) is a mobility dataset collected using a smartphone application developed as part of Vilagil research project. This application passively collects GPS positions and accelerometer signals from the smartphone. This study focuses on data collected by a 25-year-old male user. This user then added a label corresponding to the mode of transportation (walk, still, car, bus, bike, train or metro) of each observation point. The smartphone used for collection is a Samsung Galaxy A32 with the Android 11 operating system. The dataset data was collected by a single user in a discontinuous manner from July 26, 2022 to August 10, 2022. This user moved around the Occitania region in the south of France (between Toulouse and Montpellier), noting for each trip the start time, end time, and mode of transportation used. The .zip file contains two folders: - raw_data: raw accelerometer, location and label data in .csv format - processed_data: feature dataset in .csv format Please cite the paper below in your publications if it helps your research: TODO
DOI: 10.5281/zenodo.7386787
title: Occitania-Transportation Mode

description: Occitania Transport Mode (OCC-TM) is a mobility dataset collected using a smartphone application developed as part of Vilagil research project. This application passively collects GPS positions and accelerometer signals from the smartphone. This study focuses on data collected by a 25-year-old male user. This user then added a label corresponding to the mode of transportation (walk, still, car, bus, bike, train or metro) of each observation point. The smartphone used for collection is a Samsung Galaxy A32 with the Android 11 operating system. The dataset data was collected by a single user in a discontinuous manner from July 26, 2022 to August 10, 2022. This user moved around the Occitania region in the south of France (between Toulouse and Montpellier), noting for each trip the start time, end time, and mode of transportation used. The .zip file contains two folders: - raw_data: raw accelerometer, location and label data in .csv format - processed_data: feature dataset in .csv format Please cite the paper below in your publications if it helps your research: TODO
DOI: 10.5281/zenodo.7387416
title: RAÄ-2021-3144 instrument report µXRF in situ

description: XRF maps and point analyses carried out by the heritage laboratory from the the Swedish National Heritage Board on two Wari khipus from the Museums of World Culture, Gothenburg, Sweden in the context of project Dnr RAÄ-2021-3144.
DOI: 10.5281/zenodo.7387415
title: RAÄ-2021-3144 instrument report µXRF in situ

description: XRF maps and point analyses carried out by the heritage laboratory from the the Swedish National Heritage Board on two Wari khipus from the Museums of World Culture, Gothenburg, Sweden in the context of project Dnr RAÄ-2021-3144.
DOI: 10.5281/zenodo.7372420
title: [IO Islamic 910] قصّۀ تميم انصارى

description: <strong>Ḳiṣṣa-i-Tamîm Anṣârî.</strong> <strong>This manuscript is now IO Islamic 858 in the India Office collections.</strong> <strong>[metadata:</strong> <strong>Hermann Ethé</strong><strong><em>, </em></strong><strong><em>Catalogue of Persian Manuscripts in the Library of the India Office,</em></strong> <strong>2 vols. (Oxford: India Office, 1903): volume 1,</strong> <strong>number 910 here with notations and hyperlinks].</strong> 858 Ḳiṣṣa-i-Tamîm Anṣârî (قصّۀ تميم انصارى). The story of Ḥaḍrat Tamîm Anṣârî, who lived under the Khalîf ‘Umar, beginning: در خبرست از سرور كائنات فرموده اند كه بعد از خود عجائبهاى بسيار پیدا خواهد شد اوّل از حضرت تميم انصارى بود كه در وقت خلافت حضرت عمر روزى نماز گذارده نشسته بودند الخ In the following copy it is ascribed to ‘Alî Muḥammad. Copied for Mr. Richard Johnson, by Muḥammad Rafi’. No. 910, ff. 23, ll. 13; Nasta’lîḳ; size, 8¾ in. by 6 in. [<strong>ed note</strong>: Hazrat Tamim bin Ya‘ar Ansari (حضرت تَمیم بن یَعَار انصاریؓ) belonged to the branch of Banu Jadara bin ‘Auf bin Al-Harith of the Ansar tribe of the Khazraj. He participated alongside the Prophet in the battles of Badr and Uhud. A son by the name of Rib‘i and a daughter by the name of Jamila were among his children. His mother belonged to the tribe of Banu Amr. Ibn Sa'd, Muhammad ibn Mani' al-Hashimi al-Basri, <em>Al</em>-<em>Ṭabaqāt al</em>-<em>Kubra</em>, 1st edition, ed. Muhammad Abd al-Qadir Ata (Beirut: Dar al-Kutub al-'Ilmiyyah, 1990), 3: 407. In India, aspects of the story of Tamim Ansari appear to have been conflated with Hazrat Tamim ibn Zayd Ansari (تميم بن زيد الأنصاري‎‎) whose tomb is found at Kovalam, Tamil Nadu.
DOI: 10.6084/m9.figshare.21665618
title: Characteristics and predictors of Long COVID among diagnosed cases of COVID-19

description: All the details will available in the manuscript published in the PLOS One journal.
DOI: 10.5281/zenodo.7372419
title: [IO Islamic 910] قصّۀ تميم انصارى

description: <strong>Ḳiṣṣa-i-Tamîm Anṣârî.</strong> <strong>This manuscript is now IO Islamic 858 in the India Office collections.</strong> <strong>[metadata:</strong> <strong>Hermann Ethé</strong><strong><em>, </em></strong><strong><em>Catalogue of Persian Manuscripts in the Library of the India Office,</em></strong> <strong>2 vols. (Oxford: India Office, 1903): volume 1,</strong> <strong>number 910 here with notations and hyperlinks].</strong> 858 Ḳiṣṣa-i-Tamîm Anṣârî (قصّۀ تميم انصارى). The story of Ḥaḍrat Tamîm Anṣârî, who lived under the Khalîf ‘Umar, beginning: در خبرست از سرور كائنات فرموده اند كه بعد از خود عجائبهاى بسيار پیدا خواهد شد اوّل از حضرت تميم انصارى بود كه در وقت خلافت حضرت عمر روزى نماز گذارده نشسته بودند الخ In the following copy it is ascribed to ‘Alî Muḥammad. Copied for Mr. Richard Johnson, by Muḥammad Rafi’. No. 910, ff. 23, ll. 13; Nasta’lîḳ; size, 8¾ in. by 6 in. [<strong>ed note</strong>: Hazrat Tamim bin Ya‘ar Ansari (حضرت تَمیم بن یَعَار انصاریؓ) belonged to the branch of Banu Jadara bin ‘Auf bin Al-Harith of the Ansar tribe of the Khazraj. He participated alongside the Prophet in the battles of Badr and Uhud. A son by the name of Rib‘i and a daughter by the name of Jamila were among his children. His mother belonged to the tribe of Banu Amr. Ibn Sa'd, Muhammad ibn Mani' al-Hashimi al-Basri, <em>Al</em>-<em>Ṭabaqāt al</em>-<em>Kubra</em>, 1st edition, ed. Muhammad Abd al-Qadir Ata (Beirut: Dar al-Kutub al-'Ilmiyyah, 1990), 3: 407. In India, aspects of the story of Tamim Ansari appear to have been conflated with Hazrat Tamim ibn Zayd Ansari (تميم بن زيد الأنصاري‎‎) whose tomb is found at Kovalam, Tamil Nadu.
DOI: 10.34740/kaggle/dsv/4636051
title: LUFlow Network Intrusion Detection Data Set
DOI: 10.6084/m9.figshare.21665618.v1
title: Characteristics and predictors of Long COVID among diagnosed cases of COVID-19

description: A cohort study from a tertiary care hospital of Eastern India, which captures the incidence, characteristics and predictor of Long COVID among diagnosed cases of COVID-19, during four weeks and six months of follow-up.
DOI: 10.5281/zenodo.7370322
title: [IO Islamic 2453] دفتر دوم مجمع البدائع

description: <strong>Persian Romance.</strong> <strong>This manuscript is now IO Islamic 846 in the India Office collections.</strong> <strong>[metadata:</strong> <strong>Hermann Ethé</strong><strong><em>, </em></strong><strong><em>Catalogue of Persian Manuscripts in the Library of the India Office,</em></strong> <strong>2 vols. (Oxford: India Office, 1903): volume 1,</strong> <strong>number 2453 here with notations and hyperlinks].</strong> 846 A large fragment of an anonymous Persian romance, defective both at the beginning and end, with a large lacuna (comprising, according to the Arabic paging, fifty-eight leaves) after fol. 22. On the back of the binding it is styled جوامع التواريخ, but on the last page more correctly, as it seems, دفتر دوم مجمع البدائع, the second book of a novel, entitled Majma’-albadâ’i’, or the collection of wonderful and surprising things. At the beginning seventeen leaves are missing, as the Arabic paging shows. The style of this work is about the same as in the preceding Bûstân-i-Khayâl, combining heroic legends and fairy tales. The copy is a correct and tolerably old one. No. 2453, ff. 240, ll. 21; clear Nasta’lîḳ; size, 9<sup>5/8</sup> in. by 7<sup>1/2</sup> in.
DOI: 10.5281/zenodo.7370321
title: [IO Islamic 2453] دفتر دوم مجمع البدائع

description: <strong>Persian Romance.</strong> <strong>This manuscript is now IO Islamic 846 in the India Office collections.</strong> <strong>[metadata:</strong> <strong>Hermann Ethé</strong><strong><em>, </em></strong><strong><em>Catalogue of Persian Manuscripts in the Library of the India Office,</em></strong> <strong>2 vols. (Oxford: India Office, 1903): volume 1,</strong> <strong>number 2453 here with notations and hyperlinks].</strong> 846 A large fragment of an anonymous Persian romance, defective both at the beginning and end, with a large lacuna (comprising, according to the Arabic paging, fifty-eight leaves) after fol. 22. On the back of the binding it is styled جوامع التواريخ, but on the last page more correctly, as it seems, دفتر دوم مجمع البدائع, the second book of a novel, entitled Majma’-albadâ’i’, or the collection of wonderful and surprising things. At the beginning seventeen leaves are missing, as the Arabic paging shows. The style of this work is about the same as in the preceding Bûstân-i-Khayâl, combining heroic legends and fairy tales. The copy is a correct and tolerably old one. No. 2453, ff. 240, ll. 21; clear Nasta’lîḳ; size, 9<sup>5/8</sup> in. by 7<sup>1/2</sup> in.
DOI: 10.5281/zenodo.7316825
title: GeneWiki subset created with WDSub at Biohackathon 2022

description: Subset of Wikidata obtained using this Shape Expression: https://github.com/kg-subsetting/datasets-biohackathon2022/blob/main/GeneWiki/GeneWiki.shex And the wdsub tool version 0.0.29: https://github.com/weso/wdsub which is available at docker The input dump is: wikidata-20220630-all.json.gz And the dumpformat is JSON
DOI: 10.5281/zenodo.7371784
title: GeneWiki subset created with WDSub at Biohackathon 2022

description: Subset of Wikidata obtained using this Shape Expression: https://github.com/kg-subsetting/datasets-biohackathon2022/blob/main/GeneWiki/GeneWiki.shex And the wdsub tool version 0.0.31: https://github.com/weso/wdsub which is available at docker The input dump is: wikidata-20220630-all.json.gz And the dumpformat is Turtle/RDF
DOI: 10.5281/zenodo.7388957
title: GeneWiki subset created with WDSub at Biohackathon 2022 - Turtle format - Only labels en english

description: Subset of Wikidata obtained using this Shape Expression: https://github.com/kg-subsetting/datasets-biohackathon2022/blob/main/GeneWiki/GeneWiki.shex And the wdsub tool version 0.0.31: https://github.com/weso/wdsub which is available at docker The input dump is: wikidata-20220630-all.json.gz And the dumpformat is Turtle/RDF
DOI: 10.5281/zenodo.7316824
title: GeneWiki subset created with WDSub at Biohackathon 2022 - Turtle format - Only labels en english

description: Subset of Wikidata obtained using this Shape Expression: https://github.com/kg-subsetting/datasets-biohackathon2022/blob/main/GeneWiki/GeneWiki.shex And the wdsub tool version 0.0.31: https://github.com/weso/wdsub which is available at docker The input dump is: wikidata-20220630-all.json.gz And the dumpformat is Turtle/RDF
DOI: 10.6084/m9.figshare.14616657
title: Evolution and phylogeny of hexactinellid sponge-associated zoantharians, with description of two new genera and three new species

description: Concatenated alignment of 12S, 16S, 18S, 28S, COI and ITS used to construct phylogenies on Kise et al., 2021. “Kise_etal2021_12S_16S_18S_28S_COI_ITS_ConcAlign.nex” Phylogenetic estimations using Maximum Likelihood (ML) and Bayesian posterior probabilities (BPP) methods. ML =&gt; “Kise_etal2021_12S_16S_18S_28S_COI_ITS_raxml-ng.nex” Partitions =&gt; “raxml-ng_partitionFile.txt” BPP =&gt; “Kise_etal2021_12S_16S_18S_28S_COI_ITS_BayesPP.nex”
DOI: 10.6084/m9.figshare.14616657.v1
title: Evolution and phylogeny of hexactinellid sponge-associated zoantharians, with description of two new genera and three new species

description: <b>1)</b> Concatenated alignment of 12S, 16S, 18S, 28S, COI and ITS used to construct phylogenies on Kise et al., 2021.“Kise_etal2021_12S_16S_18S_28S_COI_ITS_ConcAlign.nex” <b><br></b><b>2) </b>Phylogenetic estimations using Maximum Likelihood (ML) method.“Kise_etal2021_12S_16S_18S_28S_COI_ITS_raxml-ng.nex”<br>Phylogenetic estimations using Bayesian posterior probabilities (BPP) method.“Kise_etal2021_12S_16S_18S_28S_COI_ITS_BayesPP.nex”<br><br><b>3) </b>Others:<b>3.1) </b>Partition_scheme.“Kise_etal2021_raxml-ng_partitionFile.txt”<br><br><b>3.2) </b>Command Lines."Kise_etal2021_MrBayes_and_raxml-ng_cmdBlock.txt"<br>
DOI: 10.5281/zenodo.7389109
title: Suppl. File 1.

description: Excel file with data of the physical and chemical characterization of the water (anions, cations, total organic carbon).
DOI: 10.5281/zenodo.7389108
title: Suppl. File 1.

description: Excel file with data of the physical and chemical characterization of the water (anions, cations, total organic carbon).
DOI: 10.5281/zenodo.5677372
title: Can my Package Survive? Aligning contributions anddependencies for Ecosystem Congruence

description: Abstract: Adoption of third-party libraries for contemporary software development has led to the creation of large inter-dependency networks, where sustainability issues of a single library can have widespread network effects. Maintainers of these libraries are often overworked, relying on the contributions of volunteers to keep libraries alive. Where do these contributions come from?<br> In this work, we hypothesize that the developers who rely on a library because their code depends on it might also be the ones who contribute to the library to ensure its sustainability, i.e., their contributions and dependencies are aligned in an ecosystem. We leverage socio-technical techniques to measure the degree to which contributions align with dependency changes at the ecosystem level. We conduct a large-scale empirical study to compute our congruence metrics using 1.7 million issues, 970 thousand pull requests (PR), and over 5.3 million commits belonging to 107,242 npm packages. We find that congruence reflects global ecosystem events and has an impact on package survival. By providing quantitative evidence, our work lays the groundwork for future research on how the collective ecosystem can ensure the survival of its packages. Data Description: The source code and datasets for (a) ecosystem-level analysis (\Ecosystem_congruence_analysis(RQ1)), (b) package survival analysis (\Survival_analysis(RQ2)), and (c) file path and source code similarities of developer contributions analysis (Filepath_code_similarity_analysis(RQ3)). For each folder, it includes a text file to describe the file details.