cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5523/bris.89r3npvewel2ea8ttb67ku4d
title: The DINGO Database, v1.1 (UPDATED version available at DOI: 10.5523/bris.1jraem68g7ara21p2oi6hv4z22)

description: This is a database of pile load test information that has been built as part of the Engineering and Physical Sciences Research Council (EPSRC) funded project EP/P020933/1: Databases to INterrogate Geotechnical Observations (DINGO) which ran between 1 July 2017 and 9 June 2019. 
The database is populated with data digitised from the literature as well as datasets supplied by contributors from the geotechnical engineering industry in the United Kingdom. Contributors have agreed in writing for their data to be shared via the DINGO Database and are cited as personal communication. 
v1.1 is a minor revision of v1.0 with some error corrections. v1.0 can be found at https://doi.org/10.5523/bris.3r14qbdhv648b2p83gjqby2fl8.

N.b. these data have been superseded by The DINGO Database, v1.2 (https://doi.org/10.5523/bris.1jraem68g7ara21p2oi6hv4z22).
DOI: 10.15468/mykn0u
title: Insecta of Costa Rica (INBio)

description: Occurrence records of the Insecta class collected, identified, digitized, and published by the National Biodiversity Institute (INBio) of Costa Rica.
DOI: 10.5281/zenodo.10712047
title: Spatially Resolved Transcriptomics Atlas of Matched Primary and Metastatic Pancreatic Cancer Reveal Principles of Ecological Adaptation
DOI: 10.13012/b2idb-4878391_v1
title: Nitrogen cycling activity associated with nitrification-inhibiting maize near-isogenic lines

description: This dataset contains: field study design parameters, plant performance metrics, and nitrogen cycling rates associated with a field experiment that compared nitrification rates between maize lines with and without nitrification inhibition loci nitrogen fixation rates with with and without a nitrogen fixing inoculant product. 

The overarching goal was to evaluate nitrogen fixation by a diazotroph inoculant and retention of nitrogen in the rhizosphere via a novel nitrification inhibition phenotype of maize.
DOI: 10.1594/pangaea.911856
title: Data collected during bedload measurement trials at St. Anthony Falls and Doppler sonar simulations of bedload transport

description: This data archive contains all of the scripts and data used in preparation of the manuscript being submitted to JGR Earth Surface: Pulse Coherent Doppler Profiler Measurement of Bedload Transport: Computer Simulations and Laboratory Validation. The data used in this study were collected at the St. Anthony Falls Laboratory in Minneapolis.
DOI: 10.3886/e192292v1
title: Data and Code for: Experience-based Discrimination

description: I present and test a mechanism through which discrimination arises from individual experiences of employers with worker groups. I propose a model in which employers are initially uncertain about the productivity of one of two groups, for example a minority group, and learn through hiring. Learning is endogenous, because hiring experiences of an employer shape their subsequent decisions to hire from the group and therefore learn about its productivity. Positive experiences with the uncertain group lead to positive biases which correct themselves by leading employers to hire more from the group and learn more. In contrast, negative experiences decrease hiring and learning which preserves negative biases, leads to a negatively-skewed belief distribution about the group's productivity across employers, and can cause persistent discrimination in the form of a wage gap. The model explains apparent prejudice as "inaccurate" statistical discrimination and generates novel predictions and policy implications. I then illustrate the formation of biased beliefs from experience in an experimental labor market and find support for key model predictions.<br>
description: US adults<br>.
DOI: 10.3886/icpsr09084.v1
title: Australian National Social Science Survey, 1984
title: Version 1

description: This multipurpose survey measures a wide range of variables of interest in sociology, political science, and labor economics. It is similar to national social surveys conducted regularly in the United States, Britain, and West Germany, and much of the data are directly comparable. The questionnaire covers attitudes toward a broad range of topics, including government expenditures, taxation, inflation, crime, poverty, women and careers, migrants, political figures, and confidence in institutions such as banks and police. Other questions relate to the respondent's personal feelings about life, health, religion, moral issues, and family relationships. Political and economic data provided include party preference and voting history, income, and occupation. Additional background variables are available on education, birthplace, ethnic origin, religion, age, sex, location and size of town of residence, marital status, and union membership.
description: Datasets: 
 
 DS1: Dataset
description: The data contain a weight variable. Bound, printed copies of the codebook also are available from Social Science Data Archives, the Australian National University.
description: Noninstitutionalized persons aged 18 years or older, capable of being interviewed in English, in all States and Territories of Australia.
description: Stratified area-cluster sample.
DOI: 10.5066/p9qpryzn
title: Lithium observations, machine-learning predictions, and mass estimates from the Smackover Formation brines in southern Arkansas

description: Global demand for lithium, the primary component of lithium-ion batteries, greatly exceeds known supplies and this imbalance is expected to increase as the world transitions away from fossil fuel energy sources. The goal of this work was to calculate the total lithium mass in brines of the Reynolds oolite unit of the Smackover Formation in southern Arkansas using predicted lithium concentrations from a machine-learning model. This research was completed collaboratively between the U.S. Geological Survey and the Arkansas Department of Energy and Environment—Office of the State Geologist.  

The Smackover Formation is a laterally extensive petroleum and brine system in the Gulf Coast region that includes locally high concentrations of bromide and lithium in southern Arkansas. This data release contains input files, Python scripts, and an R script used to prepare input files, create a random forest (RF) machine-learning model to predict lithium concentrations, and compute uncertainty in brines of the Reynolds oolite unit of the Smackover Formation in southern Arkansas. This data release also contains a Python script to calculate the total mass of lithium in brines of the Reynolds oolite unit of the Smackover Formation in southern Arkansas based on porosity. Knowledge of data-science and Python and R programming languages is a prerequisite for executing the workflow associated with this product. Users can execute the scripts to prepare input data, train a RF machine-learning model, compute uncertainty, and calculate lithium mass. Explanatory variables used to train the RF model included geologic, geochemical, and temperature data from either published datasets or created and documented in this data release and the associated companion publication (Knierim and others, 2024). See the associated metadata for details.

This data release also includes output files (csvs [comma-delimited, plain-text] and rasters [geospatial grids]) of lithium concentration predictions from the RF model, uncertainty ranges, and lithium mass. The depth of prediction of lithium concentration represents the mid-point depth of the Reynolds oolite unit which varies between approximately 3,500 and 11,300 feet deep (below land-surface datum) and 0 and 400 feet thick across the model domain. For a full explanation of methods and results, see the companion manuscript Knierim and others (2024).
DOI: 10.5281/zenodo.11670413
title: A regional high-resolution (1/12 degree) coupled ocean-ecosystem model (INCOIS-BIO-ROMS) output for Indian Ocean

description: The dataset contains sea-surface temperature, sea-surface salinity, sea-surface dissolved inorganic carbon, sea-surface total alkalinity, sea-surface pH, and sea-surface partial pressure of CO2 for the Indian Ocean region. The data is available from 1980 to 2019 on a monthly time scale. Each of these data has a spatial resolution of 1/12º.
DOI: 10.5281/zenodo.7820758
title: BADELEY: base de datos de leyes en España (desde 1977)

description: BADELEY es una base de datos que contiene los casi diez mil registros de todas las leyes que han sido aprobadas en las 18 cámaras legislativas de España (Congreso y 17 autonomías), desde el año 1977 hasta 2022. El principal objetivo de la base es conocer todas las leyes que se han aprobado en las 18 cámaras legislativas españolas desde el inicio de la democracia hasta la actualidad, permitiendo, a través de la anotación de los votos que recibe cada ley, conocer si han sido aprobadas de forma consensuada o con algún grado de disenso. Entendemos por “disenso” cualquier ley que ha recibido votos negativos. Las fuentes de información han sido las páginas webs oficiales de cada parlamento autonómico y del Congreso de los Diputados. Además, de la colaboración de las instituciones públicas (servicio de biblioteca, archivo y documentación) de las 18 cámaras legislativas, a las que se agradece su ayuda. La elaboración de esta base de datos se realiza gracias al proyecto «La construcción social del consenso en entornos políticos multipartidistas» (PID2019-108667GB-I00), patrocinado por el Ministerio de Ciencia e Innovación y del proyecto «El conflicto en la política española (1980-2018). El nuevo escenario de Andalucía en perspectiva comparada» (P18-RT-5234), patrocinado por la Junta de Andalucía. Se ha beneficiado también de las contribuciones del proyecto «Conflicto y consenso parlamentario. El caso de la España de las autonomías (1980-2010)» (CSO2008-02525), patrocinado por el Ministerio de Ciencia y Tecnología. Puede encontrarse más información en la web del proyecto. Cómo citar: Xavier Coller, Beatriz Carrasco, Andrés Benítez, Carles Pamies, Pablo Domínguez, Antonio M. Jaime, Adrián del Río, Leonardo Sánchez, Sandra Bermudez, Fabiola Mota, Jean-Baptiste Harguindéguy, Andrés Santana y Sergio Pérez. <em>BADELEY: Base de datos de leyes en España 1977-2023 (v.1.0 – Abril 2023)</em>. Zenodo. https://doi.org/10.5281/zenodo.7820758
DOI: 10.5285/bd7164851bcc491b912f9d650fcf7981
title: Atmospheric trace gas observations from the UK Deriving Emissions linked to Climate Change (DECC) Network and associated data - Version 24.09

description: This version 24.09 dataset consists of atmospheric trace gas observations made as part of the UK Deriving Emissions linked to Climate Change (DECC) Network. It includes core DECC Network measurements, funded by the UK Government Department for Energy Security and Net Zero (TRN: 5488/11/2021) and through the National Measurement System at the National Physical Laboratory, supplemented by observations funded through other associated projects. 
The core DECC network consists of five sites in the UK and Ireland measuring greenhouse and ozone-depleting gases. The four UK-based sites (Ridge Hill, Herefordshire; Tacolneston, Norfolk; Bilsdale, North Yorkshire; and Heathfield, East Sussex) sample air from elevated inlets on tall telecommunications towers. Mace Head, situated on the west coast of Ireland, samples from an inlet 10 metres above ground level and is ideally situated to intercept baseline air from the North Atlantic Ocean. The measurement site at Weybourne, Norfolk, funded by the National Centre for Atmospheric Science (NCAS) and operated by the University of East Anglia, is also affiliated with the network. Mace Head and Weybourne data are archived separately - see links in documentation. Data from the UK DECC network are used to assess atmospheric trends and quantify UK emissions, and feed into other international research programs, including the Integrated Carbon Observation System (ICOS) and Advanced Global Atmospheric Gases Experiment (AGAGE) networks.
DOI: 10.6084/m9.figshare.26955817
title: Seedling_EM_colonization_survival_growth_dat

description: We grew ectomycorrhizal (EM) tree seedlings <i>Tsuga canadensis, </i><i>Pinus strobus, </i>and <i>Quercus </i>spp. for two years across three secondary forests dominated by arbuscular mycorrhizal (AM) <i>Acer </i>spp. trees in New York, USA. Seedlings were planted next to either the dominant AM <i>Acer </i>spp. or scattered EM <i>Betula </i>spp. A subset of seedlings received soil inoculum from local EM dominated forests, which included an old-growth <i>Tsuga</i>-hardwood forest, residual <i>Tsuga</i>-hardwood forest, as well as a secondary forest dominated by <i>Quercus rubra </i>and planted <i>Picea abies. </i>Seedling survival and height growth were monitored annually, and upon harvest we measured seedling shoot mass and EM fungal colonization of roots. We identified EM fungi using morphotyping following by restriction fragment length polymorphism (RFLP) of rDNA internal transcribed spacer (ITS) amplicons and Sanger DNA sequencing of RFLP exemplars.
DOI: 10.5281/zenodo.12626983
title: Cantabrian Mixed Forests ecoregion

description: Here are included two files related to the vegetation survey: 

González- García, V., Fernández- Pascual, E., Font, X. & Jiménez- Alfaro, B. (2024) Forest habitat diversity in the Cantabrian Mixed Forests ecoregion (NW Iberian Peninsula), a climatic refugium in western Europe. Applied Vegetation Science, 27, e12793. Available from: https://doi.org/10.1111/avsc.12793

 

forests_header.csv includes all the relevés classified during this research: original SIVIM code, coordinates in UTM grid cells of 10x10, 1x1km and decimal degrees, original elevation of the relevés, plants cover (%), aspect, slope, the area (m2), syntaxa originally associate to each relevé, year of publication and accuracy of the decimal degrees coordinates.

iberoatlantic.rar includes the shapefile of the ecoregion, as redesign for this research, using as base the "ibero-atlantic territories" proposed by Fernández Prieto et al. 2023.
DOI: 10.5517/ccwxvyk
title: CCDC 832100: Experimental Crystal Structure Determination

description: Related Article: T.Bierke|2011|Thesis|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.26980447
title: Code and input files

description: Zip folder contains all code and linked data files for deriving binary 1km maps for each of the 19 land-based climate mitigation strategies. Download links for original data inputs and detailed methods are described in the manuscript and supporting information, which is in press (09/10/2024). A previous version of the manuscript is presently available on bioRxiv: https://doi.org/10.1101/2024.01.04.574063.Output maps: https://doi.org/10.6084/m9.figshare.24933312Reference for the manuscript:Beaury, E.M.B, Smith, J.R., Levine, J. Global suitability and spatial overlap of land-based climate mitigation strategies. Global Change Biology. In press.<br>
DOI: 10.5281/zenodo.13757126
title: Data related to manuscript: Comparison of size distribution and electrical particle sensor measurement methods for particle lung deposited surface area (LDSAal) in ambient measurements with varying conditions (accepted for publication in Aerosol Research)

description: These files include data which was utilised to calculate the results in the manuscript (https://doi.org/10.5194/ar-2024-13).
DOI: 10.1285/i26113775n2p85
title: La organización territorial de Colombia y la estructuración de su sistema de planeación y ordenamiento territorial
DOI: 10.17632/wwnbr2y5hw.9
title: Research Materials for the Thesis

description: The objective of this research is to create an automated design feedback workflow serving QTO for structural components using Dynamo, a BIM-assisted visual programming tool. A BPMN(Business Process Modeling Notation) Diagram drawn up with Visio software can clearly show the flow forms of data types and information between 'Client', 'Structure Engineer' and 'Estimator'; UML (Unified Modeling Language) Diagram can be used to classify, construct, document, interpret and visualize numerous elements of a dense system using a standardized language to make the data hierarchy clear and the information explicit; Revit Dynamo scripts are used to automate the design-feedback process; Detailed data of the study results are presented in Project Data.
DOI: 10.17632/yzkv39ppsz.1
title: Versatile tools for masking and annotation of plastid genomes: cpanno and masker

description: Versatile tools for masking and annotation of plastid genomes: cpanno and masker.

Markus Kiefer*, Christiane Kiefer, Marcus A. Koch

Universität Heidelberg, Centre for Organismal Studies (COS), 69120 Heidelberg, Germany
* Author for correspondence

cpanno.py is a Python helper script to transfer annotation from a reference to (e.g.) an assembled sequence via a Genbank GFF table. Generation of a graphical overview is possible. As prerequisites it relies on the MAFFT alignment program, the Biopython module and the seqret tool from the EMBOSS package. A usage message is implemented to output program options. 

masker.sh is a BASH shell script that uses seqret from the EMBOSS package, the Python script cpanno and bedtools to mask uncallable regions in an assembly. If indels are present in the de novo assembled sequence relative to the reference sequence used in a reference based assembly, the positions to be masked will be adjusted accordingly. A usage message is implemented to output program options.

The tools have been successfully tested and used (cited there as inhouse scripts):

cpanno:

Stein R.E., Luque-Fernández C.R., Kiefer, C., Möbus J., Pauca-Tanco G.A., Jabbusch S., Harpke D., Bechteler J., Quandt D., Villasante F., Koch M.A. (2023) Climate-driven past and present interspecies gene flow may have contributed to shape microscale adaptation capacity in Tillandsia lomas in hyperarid south American desert systems. Global and Planetary Change, https://doi.org/10.1016/j.gloplacha.2023.104258

cpanno and masker:

Hendriks K.P., Kiefer C., Al-Shehbaz I.A., Bailey D., Hooft van Huysduynen A., Nikolov L.A., Nauheimer L., Zuntini A.R., German D.A., Franzke A., Koch M.A., Lysak M.A., Toro-Nunez O., Özudogru B., Invernón V.R., Walden N., Maurin O., Hay N.M., Shushkov P., Mandakova T., Schranz M.E., Thulin M., Windham M.D., Resetnik I., Spaniel S., Ly E., Pires J.C., Harkess A., Neuffer B., Vogt R., Bräuchler C., Rainer H., Janssens S.B., Schmull M., Forrest A., Guggisberg A., Zmarzty S., Lepschi B.J., Scarlett N., Stauffer F.W., Schönberger I., Heenan P., Baker W.J., Forest F., Mummenhoff K., Lens F. (2023) Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset. Current Biology 33: 1-17. https://doi.org/10.1016/j.cub.2023.08.026

Koch M.A., Kiefer C., Möbus J., Quandt D., Merklinger D., Harpke D., Villasante Benavides F. (2022) Range expansion and contraction of Tillandsia landbeckii lomas in the hyperarid Chilean Atacama Desert indicates ancient introgression and geneflow. Perspectives in Plant Ecology, Evolution and Systematics 56: 125689. https://doi.org/10.1016/j.ppees.2022.125689
DOI: 10.34740/kaggle/dsv/3966847
title: CCTV Human Pose Estimation Dataset
DOI: 10.3886/e190941v1
title: Data and Code for: Expected Returns to Crime and Crime Location

description: This is the replication package for the article "Expected Returns to Crime and Crime Location". We provide first evidence that temporal variations in the expected returns to crime affect the
location of property crime. Our identification strategy relies on the widely-held perception
in the UK that households of South Asian descent store gold jewellery at home. Price
movements on the international market for gold exogenously affect the expected gains from
burgling these households, which become relatively more lucrative targets as the gold price
increases. Using a neighbourhood-level panel on reported crime and difference-in-differences,
we find that burglaries in South Asian neighbourhoods are more sensitive to variations in
the gold price than other neighbourhoods in the same municipality, confirming that burglars
react rationally to variations in the expected returns to their activities. We conduct a battery
of robustness tests to eliminate alternative explanations.
description: Neighbourhood (lower layer super output areas) in England and Wales. Smallest Geographic Unit: Lower layer super output area (LSOA)
DOI: 10.3886/e193134v1
title: Data and Code for: Preferences, access, and the STEM gender gap in centralized high school assignment

description: The gender gap in science, technology, engineering, and mathematics (STEM) widens during high school, due both to differences in student choices and institutional barriers to accessing STEM education. Using rich data from Mexico City's centralized assignment system and a structural model of high school choice, we document strong demand for elite STEM and relatively weak demand for non-elite STEM programs. Decomposition and counterfactual simulations demonstrate that most of the gap is due to gendered choices, with males more strongly preferring STEM. Test-based assignment restricts elite STEM access for females, who have lower placement test scores despite similar low-stakes exam scores.<br><br>
description: Public high school applicants in the Mexico City metropolitan area in years 2007 and 2008.<br>.
DOI: 10.5281/zenodo.12722163
title: Dataset & analysis for: Lab Sustainability Programs LEAF and My Green Lab: impact, user experience & suitability

description: Dataset and analysis. Lab Sustainability Programs LEAF and My Green Lab: impact, user experience & suitability
DOI: 10.5683/sp2/g5aleh
title: Water bath demonstrations of two buoyancy ventilation modes: displacement vs. mixing

description: Water bath demonstration of the fluid mechanics of natural displacement and natural mixing ventilation (two forms of buoyancy ventilation). Conducted in preparation for CFI IF grant application.