cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20438472
title: Additional file 2 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 2: Supplementary Table 2. Contingency test results for highly methylated CpGs. Test statistics and P-values from chi-squared tests comparing genomic locations of highly methylated CpGs and all CpGs with 5x coverage detected by WGBS.
DOI: 10.6084/m9.figshare.20438472.v1
title: Additional file 2 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 2: Supplementary Table 2. Contingency test results for highly methylated CpGs. Test statistics and P-values from chi-squared tests comparing genomic locations of highly methylated CpGs and all CpGs with 5x coverage detected by WGBS.
DOI: 10.6084/m9.figshare.20438478
title: Additional file 4 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 4: Supplementary Table 3. Number of differentially methylated loci in each chromosome. Number of DML, genes, and CpGs present in the ten C. gigas chromosomes and scaffolds not placed in any linkage group.
DOI: 10.6084/m9.figshare.20438478.v1
title: Additional file 4 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 4: Supplementary Table 3. Number of differentially methylated loci in each chromosome. Number of DML, genes, and CpGs present in the ten C. gigas chromosomes and scaffolds not placed in any linkage group.
DOI: 10.6084/m9.figshare.20438481
title: Additional file 5 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 5: Supplementary Table 4. Differentially methylated loci per gene. Gene ID and the number of DML located in that gene.
DOI: 10.6084/m9.figshare.20438481.v1
title: Additional file 5 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 5: Supplementary Table 4. Differentially methylated loci per gene. Gene ID and the number of DML located in that gene.
DOI: 10.6084/m9.figshare.20438484
title: Additional file 6 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 6: Supplementary Table 5. Contingency test results for DML. Test statistics and P-values from chi-squared tests comparing genomic locations of DML and all CpGs with 5x coverage detected by WGBS.
DOI: 10.6084/m9.figshare.20438487
title: Additional file 7 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 7: Supplementary Table 6. Biological process GOterm enrichment results. Enrichment analysis p-values and annotation of genes containing significant biological process GOterms and differentially methylated loci.
DOI: 10.6084/m9.figshare.20438490
title: Additional file 8 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 8: Supplementary Table 7. Cellular component GOterm enrichment results. Enrichment analysis p-values and annotation of genes containing significant cellular component GOterms and differentially methylated loci.
DOI: 10.6084/m9.figshare.20438484.v1
title: Additional file 6 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 6: Supplementary Table 5. Contingency test results for DML. Test statistics and P-values from chi-squared tests comparing genomic locations of DML and all CpGs with 5x coverage detected by WGBS.
DOI: 10.6084/m9.figshare.20438487.v1
title: Additional file 7 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 7: Supplementary Table 6. Biological process GOterm enrichment results. Enrichment analysis p-values and annotation of genes containing significant biological process GOterms and differentially methylated loci.
DOI: 10.6084/m9.figshare.20438490.v1
title: Additional file 8 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 8: Supplementary Table 7. Cellular component GOterm enrichment results. Enrichment analysis p-values and annotation of genes containing significant cellular component GOterms and differentially methylated loci.
DOI: 10.6084/m9.figshare.20438493
title: Additional file 9 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 9: Supplementary Table 8. List of differentially methylated loci. Chromosome, start, end, and methylation difference information for differentially methylated loci.
DOI: 10.6084/m9.figshare.20438493.v1
title: Additional file 9 of Differential DNA methylation in Pacific oyster reproductive tissue in response to ocean acidification

description: Additional file 9: Supplementary Table 8. List of differentially methylated loci. Chromosome, start, end, and methylation difference information for differentially methylated loci.
DOI: 10.6084/m9.figshare.20438579
title: Additional file 1 of Homicide rates are spatially associated with built environment and socio-economic factors: a study in the neighbourhoods of Toronto, Canada

description: Additional file 1.
DOI: 10.6084/m9.figshare.20438579.v1
title: Additional file 1 of Homicide rates are spatially associated with built environment and socio-economic factors: a study in the neighbourhoods of Toronto, Canada

description: Additional file 1.
DOI: 10.6084/m9.figshare.20438582
title: Additional file 2 of Homicide rates are spatially associated with built environment and socio-economic factors: a study in the neighbourhoods of Toronto, Canada

description: Additional file 2.
DOI: 10.6084/m9.figshare.20438582.v1
title: Additional file 2 of Homicide rates are spatially associated with built environment and socio-economic factors: a study in the neighbourhoods of Toronto, Canada

description: Additional file 2.
DOI: 10.6084/m9.figshare.20438585
title: Additional file 3 of Homicide rates are spatially associated with built environment and socio-economic factors: a study in the neighbourhoods of Toronto, Canada

description: Additional file 3.
DOI: 10.6084/m9.figshare.20438585.v1
title: Additional file 3 of Homicide rates are spatially associated with built environment and socio-economic factors: a study in the neighbourhoods of Toronto, Canada

description: Additional file 3.
DOI: 10.6084/m9.figshare.20438592
title: Additional file 1 of The pillars of health: influence of multiple lifestyle behaviors on body mass index and depressive symptoms in adult twins

description: Additional file 1. Appendix Material.
DOI: 10.6084/m9.figshare.20438592.v1
title: Additional file 1 of The pillars of health: influence of multiple lifestyle behaviors on body mass index and depressive symptoms in adult twins

description: Additional file 1. Appendix Material.
DOI: 10.5281/zenodo.6934504
title: Data from: Integrating herbivore assemblages and woody plant cover in an African savanna to reveal how herbivores respond to ecosystem management

description: African savannas are experiencing anthropogenically-induced stressors that are accelerating the increase of woody vegetation cover. To combat this, land managers frequently implement large-scale clearing of trees, which can have a cascading influence on mammalian herbivores. Studies rarely focus on how differences in woody cover influence the herbivore assemblage, making it difficult to assess how aggressive measures, or the lack of management, to counteract increasing woody cover affect the local composition and biodiversity of herbivores. We address this knowledge gap by applying a model-based clustering approach to field observations from to identify multiple herbivore–vegetation ‘configurations,’ defined as unique sets of herbivore assemblages (i.e., groups of herbivores) associated with differing woody plant covers. Our approach delineated how tree-clearing influences the distribution and abundance of the herbivore community in relation to surrounding savanna areas, which represent a natural mosaic of varying woody cover. Regardless of season, both intensively managed areas cleared of trees and unmanaged areas with high tree cover contained configurations that had depauperate assemblages of herbivores (low species richness, low abundance). By contrast, habitats with intermediate cover of woody vegetation had much higher richness and abundance. These results have substantial implications for managing African savannas in a rapidly changing climate.
description: This manuscript includes the analysis of data pertaining to certain at-risk species and is therefore considered sensitive data. Thus, to protect these species and abide by ethical data management, these data have been removed from the datasets (dry_configs.csv and wet_configs.csv). Please contact the corresponding author for more information.
DOI: 10.5281/zenodo.6934503
title: Data from: Integrating herbivore assemblages and woody plant cover in an African savanna to reveal how herbivores respond to ecosystem management

description: African savannas are experiencing anthropogenically-induced stressors that are accelerating the increase of woody vegetation cover. To combat this, land managers frequently implement large-scale clearing of trees, which can have a cascading influence on mammalian herbivores. Studies rarely focus on how differences in woody cover influence the herbivore assemblage, making it difficult to assess how aggressive measures, or the lack of management, to counteract increasing woody cover affect the local composition and biodiversity of herbivores. We address this knowledge gap by applying a model-based clustering approach to field observations from to identify multiple herbivore–vegetation ‘configurations,’ defined as unique sets of herbivore assemblages (i.e., groups of herbivores) associated with differing woody plant covers. Our approach delineated how tree-clearing influences the distribution and abundance of the herbivore community in relation to surrounding savanna areas, which represent a natural mosaic of varying woody cover. Regardless of season, both intensively managed areas cleared of trees and unmanaged areas with high tree cover contained configurations that had depauperate assemblages of herbivores (low species richness, low abundance). By contrast, habitats with intermediate cover of woody vegetation had much higher richness and abundance. These results have substantial implications for managing African savannas in a rapidly changing climate.
description: This manuscript includes the analysis of data pertaining to certain at-risk species and is therefore considered sensitive data. Thus, to protect these species and abide by ethical data management, these data have been removed from the datasets (dry_configs.csv and wet_configs.csv). Please contact the corresponding author for more information.
DOI: 10.25416/ntr.20382465
title: Interdisciplinary learning in social work education (Research Poster)

description: This research poster reates to a small pilot study I carried out where Social Work students were taught alongside Policing students at Nottingham Trent Univeristy. This study is part of a broader project I am developing where I hope to embed more interdisciplinary teaching across professional courses in the curriculum.
DOI: 10.25416/ntr.20382465.v1
title: Interdisciplinary learning in social work education (Research Poster)

description: This research poster reates to a small pilot study I carried out where Social Work students were taught alongside Policing students at Nottingham Trent Univeristy. This study is part of a broader project I am developing where I hope to embed more interdisciplinary teaching across professional courses in the curriculum.
DOI: 10.34740/kaggle/dsv/4031444
title: Micro-Organism Image Classification
DOI: 10.34740/kaggle/dsv/4031462
title: Micro-Organism Image Classification
DOI: 10.5519/qd.e8mko64h
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.25430/researchdata.cab.unipd.it.00000623
title: MU-MIMO Wi-Fi beamforming feedback matrices database for radio fingerprinting

description: This database collects the .pcap files acquired by monitoring a private IEEE 802.11ac Wi-Fi network operating in multi-user multi-input multi-output (MU-MIMO) mode. The Wi-Fi network consists of one access point (AP) (beamformer) and two stations (STAs) (beamformees). The AP was implemented through a Gateworks GW6200 single board computer (SBC) equipped with a Compex WLE1216v5-23 IEEE 802.11ac module. Two Netgear Nighthawk X4S AC2600 routers, with 1 or 2 out of 4 antennas enabled, acted as STAs (beamformees). At the AP, 3 antennas were used to sound the channel for downlink (DL) MU-MIMO transmission mode and the STAs were served with 1 or 2 spatial streams each. For the data transmission between the AP and the STAs, we used channel 42, i.e., with carrier frequency of 5.21 GHz and 80 MHz bandwidth. The number of OFDM sub-channels sounded is 234 as the mechanism does not consider the 14 control sub-channels and the 8 pilot ones. The AP uses the quantization parameters 9 and 7 for phi and psi feedback angles, respectively. We generated UDP traffic in the DL direction to induce the AP to trigger the channel sounding mechanism, and collected the angles (phi, psi) that were sent back by the beamformees using the Wireshark network analyzed toolkit running on an off-the-shelf laptop equipped with an IEEE~802.11ac Wi-Fi card. This allows retrieving the beamforming feedback matrices associated with each sounding operation. Two datasets - namely D1 and D2 - were collected. As for the former, the STAs were deployed at different positions to generate different beam patterns and different SNR regimes. The number of enabled antennas is 2 for each beamformer and each of them is served with 2 spatial streams. Dataset D2 was collected while the AP was manually moved in the environment. Here, the number of enabled antennas and spatial streams is 1 for the first beamformee and 2 for the second. The datasets were collected in two different indoor environments. For more information about the setup, please, refer to the related publication. This dataset was used to design and assess the performance of DeepCSI presented in the article ''DeepCSI: Rethinking Wi-Fi Radio Fingerprinting Through MU-MIMO CSI Feedback Deep Learning'' by Francesca Meneghello, Michele Rossi, Francesco Restuccia. The Python source code is available at https://github.com/signetlabdei/DeepCSI. If you use this dataset, please cite our paper: @inproceedings{meneghello2022deepcsi, author = {Meneghello, Francesca and Rossi, Michele and Restuccia, Francesco}, title = {{DeepCSI: Rethinking Wi-Fi Radio FingerprintingThrough MU-MIMO CSI Feedback Deep Learning}}, booktitle = {IEEE International Conference on Distributed Computing Systems}, year = {2022} }
DOI: 10.57841/casdc.0000004
title: Structure-Based Discovery and Optimization of Furo[3,2-c]pyridin-4(5H)-one Derivatives as Potent, Second Bromodomain (BD2)-Selective Inhibitors of BRD4
DOI: 10.57841/casdc.0000005
title: Raw data for the article "Discovery of the First Examples of Threonine Tyrosine Kinase PROTAC Degraders"
DOI: 10.57841/casdc.0000006
title: Raw data for the article "Modeling Multiple Endocrine Neoplasia Type 1 with Patient-Origin iPSCs Reveals Inhibition of GLP-1 signaling ameliorated disease phenotypes"
DOI: 10.57841/casdc.0000007
title: Raw data for the article "Design, Synthesis, and Biological Evaluation of 1-(Indolizin- 3-yl)ethan-1-ones as CBP Bromodomain Inhibitors for the Treatment of Prostate Cancer"
DOI: 10.57841/casdc.0000008
title: Raw data for the article "Hepatic CPT1A Facilitates Liver–Adipose Cross Talk via Induction of FGF21 in Mice"
DOI: 10.57841/casdc.0000009
title: Raw data for the article "Development of novel C2-symmetrical [5]oxahelicenoid diols"
DOI: 10.57841/casdc.0000010
title: Raw data for the article "Enantioselective Construction of 1H-Isoindoles Containing Tri- and Difluoromethylated Quaternary Stereogenic Centers via Palladium-Catalyzed C−H Bond Imidoylation"
DOI: 10.57841/casdc.0000011
title: Raw data for the article "Design, synthesis, and biological evaluation of novel 6-methyl-7-deazapurine nucleoside analogs as anti-Zika virus agents"
DOI: 10.57841/casdc.0000012
title: Raw data for the article "Discovery, Optimization and Evaluation of 1-(Indolin-1-yl)ethan-1-ones as Novel Selective TRIM24 Bromodomain Inhibitors"
DOI: 10.57841/casdc.0000013
title: Raw data for the article "Palladium-Catalyzed Four-Component Cascade Imidoyl-Carbamoylation of Unactivated Alkenes"
DOI: 10.57841/casdc.0000014
title: MYB bi-allelic targeting abrogates primitive clonogenic progenitors while the emergence of primitive blood cells is not affected
DOI: 10.57841/casdc.0000015
title: Raw data for the article "Development of a rabbit model of Wiskott-Aldrich syndrome"
DOI: 10.57841/casdc.0000016
title: Raw data for the article "Palladium-Catalyzed Tandem Heck/Carbonylation/Aminocarbonylation En Route to Chiral Heterocyclic α-Ketoamides"
DOI: 10.57841/casdc.0000017
title: Raw data for the article "A New Saddle-Shaped Aza Analogue of Tetraphenylene: Atro-poselective Synthesis and Application as a Chiral Acylating Reagent"
DOI: 10.57841/casdc.0000018
title: Raw data for the article "The mechanisms of action of Plasmodium infection against cancer"
DOI: 10.57841/casdc.0000019
title: Raw data for the article "Deletion of ribosomal paralogs Rpl39 and Rpl39l compromises cell proliferation via protein synthesis and mitochondrial activity"
DOI: 10.57841/casdc.0000020
title: Data of a series of novel chiral biaryl monophosphonates
DOI: 10.57841/casdc.0000021
title: Raw data for the article "IL-7 and CCL19-secreting CAR-T cell therapy for tumors with positive glypican-3 or mesothelin"
DOI: 10.6084/m9.figshare.20430963.v1
title: metadata and silva classifier

description: metadata and silva classifier
DOI: 10.48366/r201854
title: Human pose estimation datasets

description: Human pose estimation has been studied for years. However, it is difficult to create a universal dataset for this task because human poses are variant. With the increasing number of datasets and their associated complexities, it is difficult to identify/choose the required data sources. The list of human pose datasets is summarized in this comparison.
DOI: 10.6084/m9.figshare.20430963.v2
title: metadata and silva classifier

description: metadata and silva classifier
DOI: 10.6084/m9.figshare.20438658
title: Data supporting: Impact of spatial vegetation structure on the roughness length of Alxa dryland ecosystem

description: Data and codes for evaluating two spatial parameters of spatial vegetation structure in the estimation of the aerodynamic roughness length, including 36 plots of vegetation investigation in Alxa plateau, northwesten China. The codes were coded in R 4.1.1.
DOI: 10.5281/zenodo.6965550
title: Chemical composition of PM2.5 for Deyang campaign

description: The file contains the concentrations of different PM2.5 compositions measured by a ToF-ACSM, including organics, nitrate, sulphate, ammonium and chloride (μg/m3). The interval of the campaign was from 18 December 2021 to 22 January 2022, adn the temporal resolution of the data is 10 min.
DOI: 10.5281/zenodo.6961647
title: Frost datasets Southestern Europe

description: The datasets (results) of the frost analysis in southeastern Europe. FD: Frost days (number of days) LSF: Last Spring Frost (Julian day) FAF: First Autumn Frost (Julian day) FFD: Free Frost Days (number of days) 00: horizon 2000 20: horizon 2020 30: horizon 2030 e.g. LSF00_20 means Last Spring Frost Horizon 2000 minus (-) Last Spring Frost Horizon 2020.
DOI: 10.5281/zenodo.6961646
title: Frost datasets Southestern Europe

description: The datasets (results) of the frost analysis in southeastern Europe. FD: Frost days (number of days) LSF: Last Spring Frost (Julian day) FAF: First Autumn Frost (Julian day) FFD: Free Frost Days (number of days) 00: horizon 2000 20: horizon 2020 30: horizon 2030 e.g. LSF00_20 means Last Spring Frost Horizon 2000 minus (-) Last Spring Frost Horizon 2020.
DOI: 10.5281/zenodo.6802567
title: Quantitative spectroscopy of B-type supergiants [Dataset]

description: This archive contains data used for the paper: Quantitative spectroscopy of B-type supergiants It contains reduced FOCES spectra - consult the paper for details on the reduction process.
DOI: 10.5281/zenodo.6802566
title: Quantitative spectroscopy of B-type supergiants [Dataset]

description: This archive contains data used for the paper: Quantitative spectroscopy of B-type supergiants It contains reduced FOCES spectra - consult the paper for details on the reduction process.
DOI: 10.5281/zenodo.6957888
title: Inferring global dynamics from local structure in liquid electrolytes.

description: Molecular dynamics simulation data (obtained using the HOOMD-blue package) used to generate results in "Inferring global dynamics from local structure in liquid electrolytes". 108 bulk electrolytic systems were simulated with twelve concentrations ranging from 0.0005 σ−3 to 0.05 σ−3 and nine Bjerrum lengths in the range 2.5 σ to 10.0σ. Each simulation consisted of cations, anions, and solvent, all of which are modelled as beads of diameter σ (the Lennard-Jones unit of distance) and unit mass. If the size of each bead is mapped to the size of a water molecule (2.75 Å), the concentration range of 0.0005 σ−3 to 0.05 σ−3 approximately corresponds to 0.04 M to 4 M in real units. For example, the system with concentration 0.01 σ−3 and Bjerrum length 4.0σ has the following relevant file names: "conc0.01_lb4.0.dcd" contains the MD trajectory, and "initial_config_conc0.01.gsd" contains the initial configuration. The jupyter notebook "sample_data_analysis.ipynb" illustrates how to load these trajectories as well as the computed molar conductivities for each system. "transport_coefficients.zip" contains the computed Onsager transport coefficients for each of the simulated systems.
DOI: 10.5281/zenodo.6957887
title: Inferring global dynamics from local structure in liquid electrolytes.

description: Molecular dynamics simulation data (obtained using the HOOMD-blue package) used to generate results in "Inferring global dynamics from local structure in liquid electrolytes". 108 bulk electrolytic systems were simulated with twelve concentrations ranging from 0.0005 σ−3 to 0.05 σ−3 and nine Bjerrum lengths in the range 2.5 σ to 10.0σ. Each simulation consisted of cations, anions, and solvent, all of which are modelled as beads of diameter σ (the Lennard-Jones unit of distance) and unit mass. If the size of each bead is mapped to the size of a water molecule (2.75 Å), the concentration range of 0.0005 σ−3 to 0.05 σ−3 approximately corresponds to 0.04 M to 4 M in real units. For example, the system with concentration 0.01 σ−3 and Bjerrum length 4.0σ has the following relevant file names: "conc0.01_lb4.0.dcd" contains the MD trajectory, and "initial_config_conc0.01.gsd" contains the initial configuration. The jupyter notebook "sample_data_analysis.ipynb" illustrates how to load these trajectories as well as the computed molar conductivities for each system. "transport_coefficients.zip" contains the computed Onsager transport coefficients for each of the simulated systems.
DOI: 10.6084/m9.figshare.20430963.v3
title: metadata and silva classifier

description: metadata and silva classifier
DOI: 10.5281/zenodo.6963889
title: Supplementary material for the manuscript "Transition to chaos and modal structure of magnetized Taylor–Couette flow"

description: These data and codes are the supplementary materials for the manuscript "Transition to chaos and modal structure of magnetized Taylor–Couette flow". The description of the data is in the file "DATA_OVERVIEW.txt".