cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57745/dxhpr8
title: Fiches de résultats des modèles hydrologiques de surface du projet Explore2 : S Fleuves côtiers de l'Adour-Garonne

description: Ensemble de fiche descriptives des résultats du projet Explore2 aux points de simulation pour la région hydrologique S Fleuves côtiers de l'Adour-Garonne Notice de lecture des fiches de résultats des modèles hydrologiques de surface Le projet Explore2 a produit une quantité inédite de données hydrologiques. Ainsi, des ensembles de projections hydrologiques ont été élaborés sur près de 4000 points de simulation répartis en France hexagonale. Dans un esprit de faciliter la diffusion des résultats et suite à des recommandations faites post-Explore2070, des fiches de synthèse viennent décrire les évolutions de statistiques de débit (descripteurs du régime hydrologique). Ces fiches sont toutes construites sur un schéma identique et privilégient des représentations graphiques. Elles se focalisent sur les résultats concernant les débits obtenus avec le scénario d’émission le plus émetteur (RCP8.5) et aux points disposant de projections issus d’au moins quatre modèles hydrologiques de surface. L’objectif visé des fiches est de donner à voir l’évolution de quelques variables clefs descriptives du régime hydrologique. Les valeurs numériques ne doivent pas être lues sur ces fiches, mais dans les fichiers de données brutes ou d’indicateurs pré-calculés mis à disposition, comme les fiches de synthèse, sur le portail « DRIAS les futurs de l’eau ». Ce document a pour objectif d’expliciter le contenu de ces fiches de synthèse des résultats.
DOI: 10.57745/dzt71n
title: A global database on the potential of cover crops on maize performance

description: This database includes 5185 comparisons totalling 53127 observations from 275 publications between 1967 and 2022, worldwide. This database has been used to perform a global meta-analysis to investigate whether management practices and environmental conditions related to cover crops (i.e. explanatory variables) affect maize seed germination and seedling emergence, roots colonization by arbuscular mycorrhizal fungi, plant height, biomass growth, and yield (i.e. response variables) compared to a no cover crop treatment (i.e. control).
DOI: 10.57745/eiwvgp
title: ICV de l'ananas de la Réunion dans AGRIBALYSE®

description: Description de l'inventaire de cycle de vie de l'ananas cultivé à la Réunion
DOI: 10.57745/eztrgc
title: Etude de la réponse immunitaire induite chez le furet après vaccination BCG par voie orale ou sous-cutanée

description: Ce projet vise à étudier la vaccination contre la tuberculose, dans la faune sauvage. Le furet et le blaireau sont deux espèces de Mustélidés qui sont sensibles à Mycobacterium bovis. Le blaireau étant une espèce sauvage, l’expérimentation sur cette espèce est soumise à une réglementation complémentaire contrairement au furet qui est une espèce domestique.
DOI: 10.57745/dgow4z
title: INRAE's Walnut Genetic Resources Observation (Experimental data 2017-2019)

description: Persian or English walnut (Juglans regia L.), the walnut species cultivated for nut production, is one of the oldest food sources known and is grown worldwide in temperate areas. In this work, experimental data have been collected between 2017 and 2019 in order to perform genome-wide association analyses (GWAS) on the main traits of interest in the walnut industry, related to phenology and fruit quality. The panel is constituted of 170 accessions of the 259 accessions of the INRAE's Walnut Genetic Resources. All accessions are grafted trees mostly located in the arboriculture experimental unit in Toulenne (latitude 44°34’37.442’’N – longitude 0°16’51.48’’O), near Bordeaux (France). For some accessions, several data have been also available from the French walnut experimental station of Creysse (latitude 44°53’16.529’’N – longitude 1°36’23.838’’E). The dataset consists in the raw phenotypic datafile, in "csv" format.
DOI: 10.57745/e1z1qx
title: Proteomics data from a label-free fractionation experiment

description: These proteomics data were obtained from a label-free fractionation experiment on Arabidopsis thaliana. The experimental design includes 2 genotypes and 2 conditions in 3 replicates, 12 samples in total. Each sample was fractionated into 3 fractions, leading to a total of 36 MS runs.
DOI: 10.57745/ecdssz
title: Feedback Survey Results of the Implementation Workshops

description: Results from the participant feedback survey that was carried out after the FAIRCHAIN Implementtion workshops for Switzerland, France, Belgium, Austria and Greece.
DOI: 10.57745/ecpwhv
title: Predicted Genes Overlapping Minc Telomeres

description: Twelve predicted genes in M. incognita overlap Minc telomeric repeat arrays at contig extremities. For each gene we provide a screenshot of the corresponding region in JBrowse and the magnification was set to show the entire gene. From top to bottom: - First track: predicted gene by EuGene - Second track: predicted repeat by EDTA - Last track: coverage by RNA-seq data For the RNA-seq data, we have used a mapping strategy that allows representation of highly multi-mapped reads to be able to visualize transcribed telomeric repeats. The regularly repeated arrays of RNA-seq peaks correspond to the telomeric repeat which is found in the Illumina data.
DOI: 10.57745/f4qitz
title: Dataset of drought tolerance ecophysiological traits (vulnerability, resistance and mortality risk) measured in 5 experimental plantations on 21 European forest tree species from 4 biomes.

description: The ecophysiological data of drought vulnerability, drought resistance and mortality risk presented in this dataset are individual field measurement carried out on 21 different tree species across 5 experimental forest plantations encompassing a gradient of European biomes i.e, from a Mediteranean forest in Sardinia, an Oceanic forest in the Landes region of France to 3 types of continental forests in Belgium, Germany and Austria. The dataset contains experimental measurements of eco-physiological traits collected over an extensive field campaign conducted from September 2021 to August 2022. These five experimental forests are 7 to 14 years old and are all part of the large tree diversity network -TreeDivNet- (https://treedivnet.ugent.be/). The aim of these experimental forests is to study "true diversity" effects (i.e, allowing separating between diversity and identity effect) on forest functioning. This dataset contain four files : 1) "experimental_dataset.xls" = the dataset itself; 2) "data_dictionary.xls" = the data dictionary explaining the different variables presented in the dataset; 3) "experimental_sites.xls" = a description table containing a summary of each experimental site characteristics; and 4) "readme.txt" = a full description of the dataset and files. As an exemple, we used this dataset to assessed drought tolerance (xylem vulnerability to cavitation), water stress (water potential) and a metric of drought-mortality risk (hydraulic safety margin) during the extreme 2021 and 2022 summer droughts. The results of this study are published in Global Change Biology, Decarsin et al., 2024 (under revision).
DOI: 10.57745/fheu3q
title: Datasets of seismic shots measured on 2-layer epoxy-resin models at the ultrasonic scale

description: Data was acquired on the MUSC bench (Measurement at Ultrasonic SCale) at Université Gustave Eiffel (ex-IFSTTAR) in 2019 and 2020. Four two-layer models (C0, C25, C45, and C65) are designed in epoxy-resin material and measured in the laboratory.
DOI: 10.57745/dgipgr
title: A dataset of physico-chemical properties, extractable organic N, N mineralization and physical organic matter fractionation of soils developed on loess silts, crystalline rocks and sedimentary rocks

description: A network of 137 cultivated fields covering the wide diversity of soils, crop rotations and cropping practices throughout the region of Brittany (France) was monitored to collect data on soil organic nitrogen (SON) mineralization and to identify the factors that explain the observed variability. The dataset presented in this article contains all of the information about the soils, which were subjected to pedological description and in-depth analysis of their topsoil properties. The topsoil (0-30 cm) was sampled by mixing 30 samples to obtain one composite per field, which was divided into one sub-sample sieved at 5 mm to analyze soil microbial biomass (SMB) and SON mineralization via anaerobic incubation, and one subsample dried at 40°C and sieved at 2 mm. The physico-chemical analyses included the particle-size distribution of five fractions; organic matter (OM); organic C; organic N; pH; pH KCl; CEC (Metson); CEC (cobaltihexammine); Al, Ca, Fe, K, Mg, Mn, Na échangeables à la cobaltihexammine; Olsen P; Dyer P; and total Al, Ca, Fe, K, Mg, Mn, Na and P. Physical OM fractionation was used to characterize the 200-2000 µm and 50-200 µm fractions of particulate organic matter (POM). Finally, three chemical methods were used to determine extractable organic nitrogen (EON): hot KCl, hot water and phosphate buffer tests. This dataset covers a wide range of pedological situations and cropping systems, and is of great interest to scientists searching for soil properties that can explain SON mineralization. It provides original data on EON indices, SMB and multiple forms of P
DOI: 10.57745/dwuc0h
title: Hybrid calibration of industrial robot considering payload variation - Datasets

description: The dataset contains the measurement of the position (mm) of the end-effector of an industrial robot (KUKA KR300) associated with the joint position (rad) of the robot and its payload (kg), in two different subworkspaces. For each subworkspace, 3 different payloads have been used, and for each payload, 1100 data have been measured. Thus, for each subworkspace, there is 3300 data. End-effector's dimensions are specified in the python code, in millimeters. The dataset contains also the measurement of the position (mm) of the end-effector of a collaborative robot (KUKA iiwa 14R820) associated with the joint position (rad) of the robot, in two different subworkspaces. These data have been used to train an ANN for positionning error prediction.
DOI: 10.57745/e1jaww
title: Transcriptomic analysis of water- versus Xcf-inoculated common bean seeds at three developmental stages

description: transcriptome approach was performed at three stages of seed development during seed filling, seed maturation and seed maturity to compare between seed transcriptomes from Xcf-inoculated and water-inoculated seeds.
DOI: 10.57745/ebrfip
title: Effects of agricultural practices on biodiversity

description: A dataset that provides an overview of the impacts of agricultural practices on 'local' biodiversity by collecting effect sizes from meta-analyses
DOI: 10.57745/efuz2e
title: Exploration of fMRI brain responses to oral sucrose after Roux-en-Y gastric bypass in obese Yucatan minipigs in relationship with microbiota and metabolomics profiles

description: Exploration of fMRI brain responses to oral sucrose after Roux-en-Y gastric bypass in obese Yucatan minipigs in relationship with microbiota and metabolomics profiles
DOI: 10.57745/ekzgil
title: Evaluation of the influence tensor of two disks in a periodic setting through the Poisson summation formula

description: The goal of the calculations presented here is to show numerically that in a periodic setting, the influence tensor of two disks can be expressed as a sum in the real space of the influence tensors of the first disk with all periodic images of the second disk (these interactions being evaluated with boundary conditions at infinity). This result was first published heuristically by Zecevic et Lebenson (2021, DOI:10.1002/nme.6841). However, we show that the published formula is not correct and propose a (heuristic) correction that was introduced in (Brisard, Bertin and Legoll, 2023). The corrected formula is then asserted numerically. See 00-README.html for more details.
DOI: 10.57745/ene09g
title: METABARFOOD - Results on real communities

description: This report shows the analyses performed on real samples of the METABARFOOD project with de DADA2_FROGS approach.
DOI: 10.57745/dtmbsu
title: Influence of the rare earth (R) element in Ru-supported RScSi electride-like intermetallic catalysts for ammonia synthesis at low pressure: insight into NH3 formation mechanism

description: Data set from Influence of the rare earth (R) element in Ru-supported RScSi electride-like intermetallic catalysts for ammonia synthesis at low pressure: insight into NH3 formation mechanism - Publication : Croisé C., Alabd K., Tencé S., Gaudin E., Villesuzanne A., Courtois X., Bion N. and Can F. Influence of the rare earth (R) element in Ru-supported RScSi electride-like intermetallic catalysts for ammonia synthesis at low pressure: insight into NH3 formation mechanism. ChemCatChem 2023 vol.15, n°3, p. e202201172 (12 p.). HAL : https://hal.science/hal-03992609 Dataset production context : This study investigates the influence of the rare-earth (R) element in Ru/RScSi electride-like intermetallic catalysts for ammonia synthesis under mild conditions (300–450 °C; 1–5 bar). All materials present poor specific surface area and the grain size impacts the ammonia yield. The catalytic performances follow the La to Gd lanthanides series (Ru1.7/LaScSi=Ru1.7/CeScSi=Ru1.7/PrScSi&gt;Ru1.7/NdScSi&gt;Ru1.5/SmScSi&gt;Ru1.3/GdScSi) and appear correlated with the formation of the hydride phase. Ru1.7/CeScSi shows remarkable catalytic activity under moderate condition (0.58 mmolNH3/h/g at 300 °C, 1 bar) associated with its reversible hydrogen storage–release properties. It is evidenced that RScSi materials assist the N2 dissociation in agreement with their electride character and that the hydrogen for NH3 formation mainly comes from gaseous hydrogen and not primarily from the hydride phase. It is suggested that NHX formation could be the rate determining step rather than the N2 cleavage over these catalysts. For more information see the article.
DOI: 10.57745/dyy4nd
title: Projet ACV-Carbone (2022-2024)

description: Le GIS REVALIM a souhaité avancer et améliorer la méthode actuelle de l’ACV sur la prise en compte des variations de stocks de Carbone dans les sols et la biomasse et des émissions de GES associés en lien avec les usages des sols et les changements d'usage des sols. Dans ce contexte, le projet ACV CARBONE, co-financé par l'ADEME et coordonné par ARVALIS-Institut du végétal et l’INRAE, a permis de proposer des solutions concrètes qui sont en cours de discussion pour potentielle intégration dans le version Agribalyse 3.3 (à venir en 2026). Le projet a produit différents livrables : - Un premier rapport de synthèse bibliographique, disponible dans la librairie ADEME. - Le rapport final du projet, disponible dans la librairie ADEME. - Un jeu de données proposant 3 types de facteurs d'émissions liés aux changements d'usage et de gestions des terres pour la France métropolitaine (pour différentes échelles) https://doi.org/10.57745/7UCRMF, - Un article scientifique publié dans International Journal of LCA : "Boton, X., Nitschelm, L., Juillard, M. et al. Modelling greenhouse gas emissions of land use and land-use change using spatially explicit land conversion data for French crops. Int J Life Cycle Assess (2024). https://doi.org/10.1007/s11367-024-02398-4"
DOI: 10.57745/ebfjx4
title: Acidogenic fermentation batch tests performed with three agricultural residues

description: The dataset here reported by UNIROMA concerns the activities for task 3.1 of work package 3. In particular, are reported the excel files containing the obtained results on the acidogenic fermentation batch tests performed with three agricultural residues (tomato peels, potato peels and brewery spent grain) and on the agro-industrial pretreatment carried out with super critical CO2
DOI: 10.57745/efyqsn
title: Profile of a weld bead deposited by robotized GMAW-CMT process

description: The data set contains scanned profiles of MAG-CMT weld seams deposited on flat steel sheet. 35 beads for 4 parameter sets (140 beads in total) were deposited, enabling statistical analysis of bead profile variation.
DOI: 10.57745/er4woj
title: SOWELL: A dataset to study group-housed sows’ individual behaviours and production responses to different short-term events

description: The relational database SOWELL was created to better understand the behaviour and individual responses of gestating sows facing different short-term events induced: a competitive situation for feed, hot and cold thermic conditions, a sound event, an enrichment (straw, ropes and bags available) and an impoverishment (no straw, no objects) of the pen.
DOI: 10.57745/eryq18
title: JDS2023-24361_supplementary tables

description: This is the supplementary tables for "Sensitivity analysis of the INRA 2018 feeding system for ruminants by a one-at-a-time approach: Effects of dietary input variables on predictions of multiple responses of dairy cattle".
DOI: 10.57745/ev2zhi
title: ICEscreen

description: ICEscreen is a bioinformatic pipeline for the detection and annotation of ICEs (Integrative and Conjugative Elements) and IMEs (Integrative and Mobilizable Elements).
DOI: 10.57745/exo0jy
title: Data for Pattern Matching and Parameter Identification for Parametric Timed Regular Expressions

description: The reproducibility package of the HSCC 2023 version is in "hscc_ptre-main.zip". The pdf version of the HSCC 2023 paper can also be found in the same zip file. The new examples that use polytopes are in "polytope_examples.zip". Inside the zip file see "runscript.sh" for the commands to reproduce the experiments. The instructions for compiling and building the tool "ptre" is the same as given in the "README.md" of "hscc_ptre-main.zip". The new examples that use zone-boxes and interval-boxes are in "unifyzone.zip". Inside the zip file see "runscript.sh" for the commands to reproduce the experiments. The instructions for compiling and building the tools "eitre" and "mptre" are given in "README.md" of "unifyzone.zip". Running the "make" command will generate the binaries "eitre" and "mptre".
DOI: 10.57745/f2whiu
title: NMR values Clay-Sulfat-Rock and Anhydritpowder

description: NMR values of Clay-Sulfat-Rock (from Belchentunnel, Swiss) and Anhydritpowder (Hüttenheim underground mine , Germany)
DOI: 10.57745/fswnrs
title: Wheat Observations KG

description: The Genetic and Genomic Information System (GnpIS) handles different types of data in the scope of genetics and genomics for plants including forest trees. Soft wheat phenotype observations data are integrated in GnpIS including the result of observation campaigns carried out on micro-parcels located in France between 1999 and 2015. The representation relies on the Plant Phenotype Experiment Ontology (PPEO) and the CO_321 Wheat Crop Ontology. Each observation is part of a study carried out by an institution on a crop site using certain biological material. The biological material is a seed with an accession number which is an approved identifier of a wheat species/variety. Each observation precisely and formally documents the location of the micro-parcel, the measurement method, the phenotype measurement scale, the plant development stage and the organ being observed. This dataset contains the raw observation files in CSV format as well as the Wheat Observations KG, an RDF Knowledge Graph in the RDF Turtle syntax, that represents the same data. See generation tools and further details on the WheatObservationsKG repository
DOI: 10.57745/ft6swa
title: Piégeage de Coléoptères Carabidés sur 3 années consécutives (2013, 2014 et 2015) dans les bandes enherbées et les surfaces cultivées d'une ferme expérimentale INRAE.

description: Le jeu de données présenté a été produit par la ferme expérimentale INRAE de Saint-Laurent-de-la-Prée dans le cadre de l’expérimentation-système Transi’marsh. L’objectif de cette expérimentation est de tester et de mettre en œuvre la transition agroécologique de son système de polyculture-élevage. La ferme est localisée dans les marais du littoral atlantique en Charente-Maritime (17). Elle occupe 160 ha dont 100 ha de prairies naturelles de marais et 60 ha de terres labourables drainées. Comparaison de l'abondance, de la richesse spécifique et de la composition des cortèges de Carabidés émergents dans deux types de milieu : des bandes enherbées et des cultures (d'hiver et de printemps). Il s'agit d'étudier l'intérêt qu'il peut y avoir à maintenir ou créer des bandes enherbées dans les îlots de cultures pour la diversité en Carabidés.
DOI: 10.57745/csqcic
title: Is ecology different when studied with citizen scientists? A bibliometric analysis

description: Files: * Castagneyrol-Bedessem-Julliard.Rproj -- The RProject, to be opened first * Castagneyrol-Bedessem-Julliard_MS.html -- The manuscript, generated with the .Rmd file open in the R project * Rcodes_Castagneyrol-Bedessem-Julliard_2022-12-07.Rmd -- The Codes Folders: * figures: figures generated by RCodes, or drawn manually * data: |_ table_synonyms_cleaned.csv -- list of synonyms used in the analyses: Ord - a unique number for each keyword; Original_kw - keyword extracted from source articles; N_occurences: number of occurences of Original_kw; Cleaned_kw - the synonym as used in the analyses |_ Wos full records 2011-2021: a folder containing raw data |_ data_wos_complete.csv: raw data as extracted from the web of science database, column names are explicited in the Rcodes_Castagneyrol-Bedessem-Julliard_2022-12-07.Rmd file |_ data_wos_filtered_CitSci_issues.csv: as subset of data_wos_complete.csv containing only journal issues with at least one CitSci article (see manuscript). This file can actually be generated from the codes. It is exported for convenience. |_ number_citsci_journals_wos.txt: number (count) and percentage (%) of articles published in the selected journals (Publication Titles Records)
DOI: 10.57745/enbais
title: Replication Data for: Towards tsunami early-warning with Distributed Acoustic Sensing: expected seafloor strains induced by tsunamis

description: This repository contains the data sets and Python routines to replicate results outlined in the manuscript: Towards tsunami early-warning with Distributed Acoustic Sensing: expected seafloor strains induced by tsunamis. The contents of this repository are divided into 2 zip files containing: Repository_Part1.zip A) Input files used to define and render the simulation with the SeisSol software package. B) StrainModel_Fig4_5.py -- Python routine to generate Figures 3 and 4 from the seafloor strain model as described in the manuscript. C) PREM.csv -- PREM model, auxiliary file for StrainModel_Fig4_5.py D) Rcvr_Processing.py -- Python routine to extract and process data contained in F) through I). Generate results observed in Fig.6 E) receiver_lines1234567.dat -- Receiver location file, auxiliary file for Rcvr_Processing.py F) Seafloor_Array_Y_0km -- Directory containing synthetic data (SeisSol generated) from the seafloor-buried (10cm) receivers along the array Y=0 km. G) SeaSurface_Array_Y_0km -- Directory containing synthetic data (SeisSol generated) from the receivers placed 10cm below the sea surface, along the array Y=0 km. Repository_Part2.zip H) Seafloor_Array_X_100km -- Directory containing synthetic data (SeisSol generated) from the seafloor-buried (10cm) receivers along the array X=100 km. I) SeaSurface_Array_X_100km -- Directory containing synthetic data (SeisSol generated) from the receivers placed 10cm below the sea surface, along the array X=100 km.
DOI: 10.57745/fbmurg
title: Impact of food fortification on nutritional outcome: meta-analysis data

description: This table include data extracted from a systematic literature review to conduct a meta-analysis on the impact of food fortification on nutritional outcomes
DOI: 10.57745/dwdyn0
title: Dataset for: Chaperone-mediated autophagy protects against hyperglycemic stress

description: Research data associated with the Author Accepted Manuscript (AAM) of an article published by Taylor & Francis in Autophagy on 05 Oct 2023, available at: https://doi.org/10.1080/15548627.2023.2267415