cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/q3ws-vt18
title: Parkes observations for project P1183 semester 2024OCTS_16

description: After nearly two years of monitoring, comprising 126.7 hours over 57 observations with the Parkes telescope and 49.4 hours across 101 observations with the FAST telescopes, we have determined that FRB 20220529 is an extremely active repeater. It exhibits one of the longest activity durations and a potential period. Due to frequent observations scheduled with both Parkes and FAST, we recently observed an abrupt rotation measure (RM) flare in this source. This is the first detection of such an ``RM flare'' in a fast radio burst (FRB), suggesting that the source is in an environment with occasionally erupting coronal mass ejection. This presents a unique opportunity to study the eruption environment of FRBs and investigate the relation between burst activity and other burst parameters. If confirmed, the periodicity and the ``RM flare'' of FRB 20220529 would corroborate each other and become a ``smoking gun'' of the binary origin of FRB. In our previous analysis, both Parkes and FAST observations have proven essential. While FAST's higher sensitivity has enabled the capture of many bursts, Parkes' wideband receiver has provided a good burst detection rate even during low-rate phases. Notably, during the RM flare, two high signal-to-noise ratio bursts from Parkes have been crucial in understanding the RM variations. To further investigate FRB 20220529, we have scheduled regular FAST observations every fortnight, monitoring the source for 20 minutes each time. Therefore, we also propose to monitor FRB 20220529 using the Parkes UWL receiver, ensuring high-time resolution and employing full-polarization observations.
DOI: 10.25919/yfx6-3314
title: Parkes observations for project P1165 semester 2024OCTS_10

description: We recently discovered two new pulsars J1849+1001 (35.1 ms) and J1839+0542 (57.9 ms) in a FAST pulsar survey at intermediate Galactic latitudes (PT2020_0141). Follow-up timing observations show that they are in circular orbits with massive companions. This suggests that PSR J1849+1001 and J1839+0542 can be classified as the intermediate-mass binary pulsar (IMBP). Their massive companions also make them promising systems to measure "Post-Keplerian" parameters through pulsar timing. These Parkes observations will be combined with regular timing observations with FAST to measure "Post-Keplerian" parameters and then measure both neutron star and companion masses.
DOI: 10.15468/dl.jgbtc8
title: Occurrence Download

description: A dataset containing 643 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "TaxonKey is Terminalia catappa L."
 ]
}

 The dataset includes 643 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000999-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.99pnk2
title: Occurrence Download

description: A dataset containing 387 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dipcadi longifolium (Lindl.) Baker",
 "Continent is Africa"
 ]
}

 The dataset includes 387 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001001-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69dmhk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhinacloa cardini (Barber & Bruner, 1946)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001002-250402121839773/datasets/export for details.
DOI: 10.15468/dl.75thcz
title: Occurrence Download

description: A dataset containing 452 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.countrycode = 'CO'
 AND GBIF_WITHIN('POLYGON((-89.73296 2.27322,-62.47763 2.27322,-62.47763 13.17068,-89.73296 13.17068,-89.73296 2.27322))', occurrence.decimallatitude, occurrence.decimallongitude) = TRUE
 AND occurrence.hascoordinate = TRUE
 AND occurrence.hasgeospatialissues = FALSE
 AND LOWER(occurrence.iucnredlistcategory) IN (LOWER('CR'), LOWER('EN'), LOWER('VU'))
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence."year" &gt;= 2024 AND occurrence."year" &lt;= 2025)
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 452 records were derived from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000990-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m82w9v
title: Occurrence Download

description: A dataset containing 1459 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dipcadi viride (L.) Moench",
 "Continent is Africa"
 ]
}

 The dataset includes 1459 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001003-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rzx5be
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Animalia)",
 "GadmGid is one of (COL)",
 "Year is 2024",
 "Issue is one of (Coordinate rounded)",
 "IucnRedListCategory is one of (CR, EN, VU)",
 "StateProvince is one of (caldas)"
 ]
 }
 ]
}

 The dataset includes 119 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001004-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y95kt7
title: Occurrence Download

description: A dataset containing 592 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Month is one of (June, July, August)",
 "OccurrenceStatus is Present",
 "TaxonKey is Vermivora chrysoptera (Linnaeus, 1766)"
 ]
}

 The dataset includes 592 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001005-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8q7k24
title: Occurrence Download

description: A dataset containing 1232 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diplachne fusca (L.) P.Beauv. ex Roem. & Schult.",
 "Continent is Africa"
 ]
}

 The dataset includes 1232 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001008-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bzmg9z
title: Occurrence Download

description: A dataset containing 472 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anomis argillacea Hübner, 1823",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 472 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001009-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j44b7t
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astragalus desereticus Barneby"
 ]
}

 The dataset includes 64 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001011-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3613415_d6
title: Additional file 5: Table S5. of Dormant non-culturable Mycobacterium tuberculosis retains stable low-abundant mRNA

description: Differential expression of protein-coding genes. The analysis of differential expression was performed with the edgeR software. Results for the following comparisons are shown: DE relative to Log, DM relative to DE, and DL relative to DM. Log2 fold change of gene expression, FDR-adjusted P-value for differential expression test, and M-value adjusted Log2 fold change are shown for every gene in each comparison. (XLSX 683 kb)
DOI: 10.6084/m9.figshare.c.3613439_d2
title: MOESM4 of Classification and characterization of human endogenous retroviruses; mosaic forms are common

description: Additional file 4: List S4. HERV Env subgroup consensus sequences. The FASTA names contain 1. taxorder, 2. subgroup, 3. number of members in the subgroup, 4. 23-amino acid consensus immunosuppressive domain, 5. if present, the most highly related envelope protein from maximum likelihood (Fig. 6,  7) phylograms, and 6. the bootstrap value of the common branch of these envelope proteins.
DOI: 10.6084/m9.figshare.c.3613442_d1
title: Additional file 3: of Tankyrase inhibition impairs directional migration and invasion of lung cancer cells by affecting microtubule dynamics and polarity signals

description: Raw data for Fig.Â 2 . (XLSX 128 kb)
DOI: 10.6084/m9.figshare.c.3613415_d7
title: Additional file 6: Table S6. of Dormant non-culturable Mycobacterium tuberculosis retains stable low-abundant mRNA

description: Functional enrichments analysis. Functional enrichment analysis was performed using the GOseq package [76] and functional categories from the TubercuList and PATRIC databases [33, 34]. The lists of differentially expressed (up- and down-regulated) genes were generated by the comparison of the following samples: DE vs. Log, DM vs. DE, and DL vs. DM. For each functional category, the number of differentially expressed genes, the total number of genes in the category, and the adjusted p-value of overrepresentation are shown. (XLSX 38 kb)
DOI: 10.15468/dl.usj92j
title: Occurrence Download

description: A dataset containing 18569692 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is United States of America",
 "Year 1978-2023"
 ]
}

 The dataset includes 18569692 records from 1972 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033906-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7fvwx
title: Occurrence Download

description: A dataset containing 4476 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Baeopogon indicator (J.Verreaux & E.Verreaux, 1855)"
 ]
}

 The dataset includes 4476 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009114-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rsvfhq
title: Occurrence Download

description: A dataset containing 2355 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Styela plicata (Lesueur, 1823))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2355 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046803-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vnyy7t
title: Occurrence Download

description: A dataset containing 655 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-28.90797 33.44365,48.90797 33.44365,48.90797 64.55635,-28.90797 64.55635,-28.90797 33.44365))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Laccophilus poecilus Klug, 1834"
 ]
}

 The dataset includes 655 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0201674-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sauqma
title: Occurrence Download

description: A dataset containing 3525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Spheniscus demersus (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3525 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029003-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kdqueu
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pternistis swierstrai (Roberts, 1929)"
 ]
}

 The dataset includes 47 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011732-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6a3y6
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erigeron uniflorus L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 34 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161608-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9metfl
title: Occurrence Download

description: A dataset containing 375189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((8.52539 49.83302,8.52429 49.17604,9.14063 49.17384,9.14063 49.83302,8.52539 49.83302))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 375189 records from 167 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029003-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tzpsdx
title: Occurrence Download

description: A dataset containing 2114 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Caloenas nicobarica (Linnaeus, 1758)"
 ]
}

 The dataset includes 2114 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009127-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.859fsd
title: Occurrence Download

description: A dataset containing 542 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Discoglossus montalentii Lanza, Nascetti, Capula & Bullini, 1984"
 ]
}

 The dataset includes 542 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004811-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rdh9yy
title: Occurrence Download

description: A dataset containing 745 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helenium autumnale L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 745 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161649-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u9tp66
title: Occurrence Download

description: A dataset containing 5972 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Synoicus chinensis (Linnaeus, 1766)"
 ]
}

 The dataset includes 5972 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011736-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.md75ie
title: Occurrence Download

description: A dataset containing 10917 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eretmochelys imbricata (Linnaeus, 1766)"
 ]
}

 The dataset includes 10917 records from 147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029004-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jt8k7y
title: Occurrence Download

description: A dataset containing 5261829 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carduelis carduelis (Linnaeus, 1758)"
 ]
}

 The dataset includes 5261829 records from 5433 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046792-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26532886
title: SMC Migration for Lamb et al. 2024

description: Data and code for Lamb et al. 2024 southern mountain caribou migration paper. All code used to create the results is included in this package. Migration summary data, climate and disturbance data all included as well. The Provinces requested that telemetry data was not included due to the sensitivity of these raw locations for a threatened species. Please contact the provinces of Alberta and BC if you need these raw data (contact us too and we can try and help).
DOI: 10.3334/cdiac/spruce.002
title: SPRUCE S1 Bog Peat Depth Determined by Push Probe and GPR: 2009-2010

description: This data set reports the thickness of peat for the S1 Bog measured directly with manual push probes on September 21 and 22, 2009, and measured by ground penetrating radar (GPR) across transects from January 26 to February 2, 2010 and June 2 to June 9, 2010. Also included are interpolated values of peat depth from both probe and GPR data for the S1 Bog at 1 meter square horizontal resolution.The key objectives of these geophysical field surveys were to define the S1 peat depth, basin geometry, and to provide additional subsurface information for selecting the optimal locations for experimental plots (i.e., rows of chambers). GPR was specifically used to obtain better estimates of peat depths to refine the existing 3-D model of the S1 basin geometry and to provide high-density data on peat stratigraphy and examine variations in mineral soil near the proposed experimental plots.
DOI: 10.5281/zenodo.14893005
title: Data associated to manuscript: Alternating drying and flowing phases control stream metabolism through short- and long-term effects: insights from a river network

description: Data associated to manuscript by López-Rojo et al., :

Alternating drying and flowing phases control stream metabolism through short- and long-term effects: insights from a river network

File includes the following columns:



Date

siteID

flow regime (Regime, PR: perennial or NPR: non-perennial) of each siteID

daily estimations of river ecosystem respiration (ER_daily_mean,  gO2 m-2 d-1)

daily estimations of river gross primary production (GPP_daily_mean, gO2 m-2 d-1)

daily estimations of k600 (d-1)

mean daily light (μmol m-2 s-1)

daily river discharge (Q, m3 s-1)


ER, GPP and k600 estimatioms were obtained from time series of dissolved oxygen data (and ancillary variables as atmospheric pressure, light, water depth) by inverse Bayesian modeling using the streamMetabolizer R package. All methodological details can be found in the supporting material of López-Rojo et al., 2025
DOI: 10.15468/dl.794bu8
title: Occurrence Download

description: A dataset containing 528 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atheta pallidicornis (C.G.Thomson, 1856)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 528 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018264-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.