cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.4zwuyk
title: Occurrence Download

description: A dataset containing 40521 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is Plecotus austriacus (J.Fischer, 1829)"
 ]
}

 The dataset includes 40521 records from 1738 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002347-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17031/6683c1e9ef119
title: 1960-2002 Pitois and Fox UK records of Acartia tonsa

description: A collection of Non-Native Species sightings from Sophie Pitois. The species listed are Acartia tonsa.
description: Part of MSFD NNS baseline data collation project (Jan 2016). Subset of a dataset as we were only pulling out records for a selection of INNS. Contains records for Acartia tonsa.

See Pitois, S. G., and Fox, C. J. 2008. Empirically modelling the potential effects of changes in temperature and prey availability on the growth of cod larvae in UK shelf seas. – ICES Journal of Marine Science, 65: 1559–1572. https://doi.org/10.1093/icesjms/fsn150  for original data source.
DOI: 10.6084/m9.figshare.24407812
title: Identified Arabidopsis secondary metabolites in extended darkness treatment

description: Table 1 Identified metabolites in the present study
DOI: 10.6084/m9.figshare.24407812.v2
title: Identified Arabidopsis secondary metabolites in extended darkness treatment

description: Table 1 Identified metabolites in the present study
DOI: 10.6084/m9.figshare.26212529
title: Sequencing data

description: The data provided here is unprocessed and presented exactly as outputted by the Illumina sequencers, ensuring that researchers have access to the original sequencing reads for downstream analysis and reproducibility studies.This project hosts the raw paired-end sequencing files used in DNA StairLoop, generated from Illumina sequencing platforms. The data are presented in its original, unprocessed form as outputted by the sequencers. This allows researchers to perform independent analyses, validate findings, and ensure reproducibility of the results presented in DNA StairLoop.
DOI: 10.6084/m9.figshare.26212529.v1
title: Sequencing data

description: The data provided here is unprocessed and presented exactly as outputted by the Illumina sequencers, ensuring that researchers have access to the original sequencing reads for downstream analysis and reproducibility studies.This project hosts the raw paired-end sequencing files used in DNA StairLoop, generated from Illumina sequencing platforms. The data are presented in its original, unprocessed form as outputted by the sequencers. This allows researchers to perform independent analyses, validate findings, and ensure reproducibility of the results presented in DNA StairLoop.
DOI: 10.15468/dl.72ueta
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Herminium monorchis (L.) R.Br."
 ]
}

 The dataset includes 42 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017719-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17031/6683c476dd0d0
title: 2005-2006 Ashton et al. Dunstaffnage fish farm Caprella mutica records

description: A collection of Non-Native Species sightings from Gail Ashton. The species listed are Caprella mutica.
description: Part of MSFD NNS baseline data collation project (Jan 2016). Subset of a dataset as we were only pulling out records for a selection of INNS. Contains records for Caprella mutica.

See Ashton, G. V., Willis, K. J., Burrows, M. T., Cook, E. J. (2007). Environmental tolerance of Caprella mutica: implications for its distribution as a marine non-native species. Marine environmental research, 64(3), 305-312 for original source. for original source.
DOI: 10.6084/m9.figshare.26212682
title: Encoded oligos

description: We generated a total of 3000 encoded blocks, of which 2962 blocks were filled with raw information and the rest were filled with zeros. Since the zero-filled blocks can be derived from the information blocks, we did not synthesise the sequence of zero-filled blocks (i.e., non-synthesis redundant data).
DOI: 10.17031/66851eafa843f
title: 1998-2003 Stentiford et al. UK estuaries Eriocheir sinensis records

description: A collection of Non-Native Species sightings from G D Stentiford. The species listed is Eriocheir sinensis.
description: Part of MSFD NNS baseline data collation project (Jan 2016). Subset of a dataset as we were only pulling out records for a selection of INNS. Contains records for Eriocheir sinensis.

See Hepatospora eriocheir (Wang and Chen, 2007) gen. et comb. nov. infecting invasive Chinese mitten crabs (Eriocheir sinensis) in Europe. Journal of Invertebrate Pathology. Volume 108, Issue 3, November 2011, Pages 156-166. doi: 10.1016/j.jip.2011.07.008 for original source.
DOI: 10.15468/dl.hqyzwy
title: Occurrence Download

description: A dataset containing 4041 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((90 20,155 20,155 70,90 70,90 65.7645,90 20))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Asio flammeus (Pontoppidan, 1763), Asio otus (Linnaeus, 1758))"
 ]
}

 The dataset includes 4041 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017720-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17031/66851ca21f26a
title: 2013 Scottish Natural Heritage (SNH) Scottish records of Bonnemaisonia hamifera

description: A collection of Non-Native Species sightings from Scottish Natural Heritage (SNH) now known as NatureScot. The species listed is Bonnemaisonia hamifera.
description: Part of MSFD NNS baseline data collation project (Jan 2016). Subset of a dataset as we were only pulling out records for a selection of INNS. Contains records for Bonnemaisonia hamifera.

See Moore, C. G., Harries, D. B., Cook, R. L., Hirst, N. E., Saunders, G. R., Kent, F. E. A., Trigg, C. and Lyndon, A. R. 2013. The distribution and condition of selected MPA search features within Lochs Alsh, Duich, Creran and Fyne. Scottish Natural Heritage Commissioned Report No. 566 for original source.
DOI: 10.23729/02a0639e-41d4-4fc1-a77c-d2416d531bca
title: Cement Paste Composites

description: The samples contain cement paste with PVA hydrogel enclosed by two Nickel foam electrodes with carbon nanotubes. Cement paste composites are 25 mm in diameter and 5 mm thick, while the electrodes are 25 mm x 25 mm and 1.6 mm thick. Variations of the sample details are as follows: S1 0 % hyd./cement, W/C=0.33, unfrozen, hydrogel 0 %, KOH 0. S2: 0 % hyd, 0 % hydrogel, 1 mol KOH, S3: 0% hyd/cement, hydrogel at electrode-cement interface, 0 KOH, S4: 0% hyd., hydrogel at electode-cement interface, 1 mol KOH. Samples have been rename for manuscript, which is being written. Preview dataset found at https://doi.org/10.23729/1d82b145-a11b-40c1-a9d8-533b9d903f78 . To obtain data, please contact fairdata-pas@gtk.fi .
DOI: 10.23729/4b067ddc-f837-4a14-a352-aad8aea68f77
title: Converter concrete set 2

description: Set 2 of drill cores of used magnesia-chrome bricks taken from various locations of an end-of-life brick lining of an industrial Peirce-Smith converter featured in Pankka, I., Ahmed, M.S., Tammela, J., Taskinen, P., Lindberg, D., 2024. Investigation of end-of-life chrome-magnesia refractories using X-ray computed tomography. Submitted to JOM. Preview dataset found at https://doi.org/10.23729/cade7ef0-af00-4705-a94a-386e6c9468ed . To obtain data, please contact fairdata-pas@gtk.fi .
DOI: 10.3217/6x4a4-w4n68
title: Generic crash pulses for intersection scenarios

description: This data set contains generic crash pulses obtained by Legendre polynomial approximation for different crash configurations and are supplemental material of the work presented in the SAE Paper "Generic crash pulses representative for future accident scenarios of highly automated vehicles".

Please see the included README file for a description of nomenclature and consider the applied license conditions (CC-BY).

Change log:

V1.0.1: Added Mean of OEM simulation results

Acknowledgments:

The work was carried out within the EU H2020 project "OSCCAR – Future Occupant Safety for Crashes in Cars". OSCCAR has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No 768947. 

Citation:

If data is used, please mention "Höschele, P., Smit, S., Tomasch, E., Östling, M. et al., "Generic Crash Pulses Representing Future Accident Scenarios of Highly Automated Vehicles," SAE Int. J. Trans. Safety 10(2):2022, doi:10.4271/09-10-02-0010." as reference.
DOI: 10.3217/datacite.2400t-cxv49
title: Generic crash pulses for intersection scenarios

description: This data set contains generic crash pulses obtained by Legendre polynomial approximation for different crash configurations and are supplemental material of the work presented in the SAE Paper "Generic crash pulses representative for future accident scenarios of highly automated vehicles".Please see the included README file for a description of nomenclature and consider the applied license conditions (CC-BY).Acknowledgments:The work was carried out within the EU H2020 project "OSCCAR – Future Occupant Safety for Crashes in Cars". OSCCAR has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No 768947. Citation:If data is used, please mention "Höschele, P., Smit, S., Tomasch, E., Östling, M. et al., "Generic Crash Pulses Representing Future Accident Scenarios of Highly Automated Vehicles," SAE Int. J. Trans. Safety 10(2):2022, doi:10.4271/09-10-02-0010." as reference.
DOI: 10.3217/5ps59-zdy31
title: Generic crash pulses for intersection scenarios

description: This data set contains generic crash pulses obtained by Legendre polynomial approximation for different crash configurations and are supplemental material of the work presented in the SAE Paper "Generic crash pulses representative for future accident scenarios of highly automated vehicles".

Please see the included README file for a description of nomenclature and consider the applied license conditions (CC-BY).

Change log:

V1.0.1: Added Mean of OEM simulation results

Acknowledgments:

The work was carried out within the EU H2020 project "OSCCAR – Future Occupant Safety for Crashes in Cars". OSCCAR has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No 768947. 

Citation:

If data is used, please mention "Höschele, P., Smit, S., Tomasch, E., Östling, M. et al., "Generic Crash Pulses Representing Future Accident Scenarios of Highly Automated Vehicles," SAE Int. J. Trans. Safety 10(2):2022, doi:10.4271/09-10-02-0010." as reference.
DOI: 10.15468/dl.yt6qhp
title: Occurrence Download

description: A dataset containing 778312 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((75.27425 51.03262,124.2019 51.03262,124.2019 64.35366,75.27425 64.35366,75.27425 51.03262))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 1980-2024"
 ]
}

 The dataset includes 778312 records from 145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017715-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zndr4s
title: Occurrence Download

description: A dataset containing 5344 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abies nordmanniana (Steven) Spach"
 ]
}

 The dataset includes 5344 records from 283 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017721-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12697152
title: Raw plasmon ruler data of conformational dynamics of Hsp90

description: Four time series from Plasmon ruler experimentstime resolution 0.1 s.total length 6 hHsp90 concentration 240 pMFirst analyzed and published 2018 in: https://pubs.acs.org/doi/10.1021/acs.nanolett.8b03342

2024 analyzed for memory in conformational dynamics in: https://arxiv.org/abs/2404.16799
DOI: 10.5281/zenodo.12697153
title: Raw plasmon ruler data of conformational dynamics of Hsp90

description: Four time series from Plasmon ruler experimentstime resolution 0.1 s.total length 6 hHsp90 concentration 240 pMFirst analyzed and published 2018 in: https://pubs.acs.org/doi/10.1021/acs.nanolett.8b03342

2024 analyzed for memory in conformational dynamics in: https://arxiv.org/abs/2404.16799
DOI: 10.15468/4w2yqx
title: 2012 Bray et al. Kent Crassostrea records

description: A collection of Non-Native Species sightings from D.J. Bray. The species listed is Crassostrea.
DOI: 10.6084/m9.figshare.26207306
title: The code used in the analyses.

description: <b>Background:</b> Focal segmental glomerulosclerosis (FSGS) is a clinicopathological syndrome manifesting glucocorticoid-resistant nephrosis, which requires new therapies targeting specific pathways. The Columbia classification stratifies FSGS into 5 variants: Collapsing, Tip, Cellular, Perihilar and NOS. Differences in their renal prognosis imply distinct underlying molecular mechanisms, which remain unclear.<b>Objective:</b> To investigate factors associated with the pathogenesis of FSGS and explore potential therapeutic targets.<b>Methods:</b> A total of 73 kidney biopsy tissues were analyzed by LC-MS/MS: FSGS (n=23), renal donors (n=14) as a healthy control group, and minimal change disease (n=15) and IgA nephropathy (n=21) as disease control groups. We validated the proteome data with immunohistochemistry and the Nephroseq microarray data.<b>Results:</b> Our proteomics platform identified a total of 4,168 proteins. A comparison between the FSGS with renal donor groups revealed 175 proteins increased in the FSGS group, which associated with the complement activation and immune responses. Together with comparisons against the disease control groups, complement factor D (CFD) emerged as a distinctive factor. Immunohistochemistry and the Nephroseq microarray analyses uncovered CFD production elevated primarily in glomeruli. Furthermore, the protein profiles demonstrated molecular differences underlying the Columbia variants. In the Cellular and Tip variants, factors involved in the complement pathway were enriched, while proteins associated with the ribosome, thermogenesis, and ferroptosis were predominant in the Collapsing variant.<b>Conclusion:</b> The elevated CFD and complement activation in glomeruli potentially contribute to the pathogenesis of FSGS. The molecular heterogeneity among the Columbia variants may enable to stratify treatment of FSGS as a new precision medicine approach.
DOI: 10.6084/m9.figshare.26207306.v1
title: The code used in the analyses.

description: <b>Background:</b> Focal segmental glomerulosclerosis (FSGS) is a clinicopathological syndrome manifesting glucocorticoid-resistant nephrosis, which requires new therapies targeting specific pathways. The Columbia classification stratifies FSGS into 5 variants: Collapsing, Tip, Cellular, Perihilar and NOS. Differences in their renal prognosis imply distinct underlying molecular mechanisms, which remain unclear.<b>Objective:</b> To investigate factors associated with the pathogenesis of FSGS and explore potential therapeutic targets.<b>Methods:</b> A total of 73 kidney biopsy tissues were analyzed by LC-MS/MS: FSGS (n=23), renal donors (n=14) as a healthy control group, and minimal change disease (n=15) and IgA nephropathy (n=21) as disease control groups. We validated the proteome data with immunohistochemistry and the Nephroseq microarray data.<b>Results:</b> Our proteomics platform identified a total of 4,168 proteins. A comparison between the FSGS with renal donor groups revealed 175 proteins increased in the FSGS group, which associated with the complement activation and immune responses. Together with comparisons against the disease control groups, complement factor D (CFD) emerged as a distinctive factor. Immunohistochemistry and the Nephroseq microarray analyses uncovered CFD production elevated primarily in glomeruli. Furthermore, the protein profiles demonstrated molecular differences underlying the Columbia variants. In the Cellular and Tip variants, factors involved in the complement pathway were enriched, while proteins associated with the ribosome, thermogenesis, and ferroptosis were predominant in the Collapsing variant.<b>Conclusion:</b> The elevated CFD and complement activation in glomeruli potentially contribute to the pathogenesis of FSGS. The molecular heterogeneity among the Columbia variants may enable to stratify treatment of FSGS as a new precision medicine approach.
DOI: 10.15468/dl.95a48h
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Iris loczyi Kanitz"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017723-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/9hvebn
title: 2011 Marine Biological Association of the UK (MBA) Batten Bay Corella eumyota survey

description: Citizen Science timed search of Mount Battern for Corella eumyota
DOI: 10.6084/m9.figshare.26212718
title: Cleaned sequencing reads

description: Sequencing data that has been processed and cleaned, ready for decoder input.
DOI: 10.3886/e207781
title: The Impact of Psychological Capital on the Employment Expectations of Vocational Undergraduates

description: Data of "The Impact of Psychological Capital on the Employment Expectations of Vocational
Undergraduates: The Chain Mediating Role of Active Coping Style and Educational
Flow Experience".
DOI: 10.3886/e207781v1
title: The Impact of Psychological Capital on the Employment Expectations of Vocational Undergraduates

description: Data of "The Impact of Psychological Capital on the Employment Expectations of Vocational
Undergraduates: The Chain Mediating Role of Active Coping Style and Educational
Flow Experience".
DOI: 10.34730/e589ec2eb326431597b460340c4b30aa
title: DEIMS-SDR - Geodata Collection - July 2024

description: This record contains the boundaries and centroid/representative coordinates of all sites registered on DEIMS-SDR (www.deims.org). The provided shapefiles include information about the location and extent of sites as well as their names and IDs. This record will be updated periodically to reflect the stable snapshots of the geodata on DEIMS-SDR. The purpose of this record is to provide researchers with a simple way to have access to the geodata of DEIMS-SDR. While we aim for highest accuracy, we cannot guarantee that the provided information is always completely accurate. For the very latest version of geodata, please download the respective coordinates or boundaries from DEIMS.org.

For further information (citation, data licence, disclaimer) please refer to the following pages:
www.deims.org
www.deims.org/about
www.deims.org/terms
www.deims.org/docs
DOI: 10.15468/dl.zxjs3r
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Draba oreades Schrenk"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017724-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25315807
title: Risk factors for deliberate self-poisoning among children and adolescents in The Netherlands

description: In the past decade, the number of deliberate self-poisonings involving young people has increased strongly worldwide. This study aimed to gain insight into risk factors associated with deliberate self-poisonings among children and adolescents reported to the Dutch Poisons Information Center. A study was performed between 1 February 2022 and 31 January 2023 involving those aged 8–17 years of age with deliberate self-poisoning. Data were collected on patient characteristics (age, gender, body mass index and living situation) and exposure characteristics (type of toxicant, way of acquiring toxicant and day of exposure). The Dutch Poisons Information Center was consulted about 1,424 deliberate self-poisonings among children and adolescents (10–17 years old). A high percentage of patients were female (85 percent), had a body mass index classified as overweight/obese (27 percent) and lived in a mental healthcare facility (13 percent). Patients mainly exposed themselves to pharmaceuticals, especially over-the-counter medications such as paracetamol (46 percent) and ibuprofen (15 percent). Young people living with parents/caregivers had higher odds of ingesting prescription pharmaceuticals or over-the-counter medication, while those living in a mental healthcare facility were more likely to ingest household products, personal care products or foreign bodies (predominantly batteries). This study sheds light on the pervasive issue of deliberate self-poisoning among children and adolescents, advocating for poisoning prevention strategies and promoting mental health of youth. Limitations include reliance on self-reported data from patients and the absence of clinical outcome data. Female gender, a high body mass index and living in a mental healthcare facility are associated with in increased risk of deliberate self-poisonings in children and adolescents (10-17 years old). Prevention of deliberate self-poisonings among youth could focus on restricting access to medication and other potentially hazardous non-pharmaceuticals, such as household products and batteries, as well as limiting the sales of over-the-counter medication, especially paracetamol, to this young population.