cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1407780.10fu
title: SH1407780.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1407783.10fu
title: SH1407783.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1407784.10fu
title: SH1407784.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.pf9tth
title: Occurrence Download

description: A dataset containing 280 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OrganismQuantity 2.0-100000.0",
 "TaxonKey is Sphyrna lewini (Griffith & Smith, 1834)"
 ]
}

 The dataset includes 280 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078853-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9sh8uz
title: Occurrence Download

description: A dataset containing 38107 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Xanthium strumarium L.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 38107 records from 679 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078852-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8716881
title: Layline Shareholder activism dataset
DOI: 10.15468/dl.wbq5hg
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Glironia venusta Thomas, 1912"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078856-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8u25km
title: Occurrence Download

description: A dataset containing 711998 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anthriscus sylvestris (L.) Hoffm.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 711998 records from 2375 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078841-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/1hq-t9c-e2z
title: Teschenites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bcw-cy3-629
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zv5-r1f-5g6
title: Calcarina defrancei d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h20-7qc-bjs
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bas-3x8-8f3
title: Eucytherura (Eucytherura) Müller, 1894

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ye6-eyf-86v
title: Lima Bruguière, 1797

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bth-e1a-sbe
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m3f-mky-a3q
title: †Schloenbachia varians (Sowerby, 1817)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/79j-aba-k9b
title: Articularia lineata (Brady, 1884)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r0e-65e-3s4
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fzy-6at-fgy
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1p1-2tz-1ba
title: Barremites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dn8-203-2gc
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v2f-g4b-lra
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ekv-2ww-bjy
title: †Miliola Lamarck, 1804

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k0b-ppk-naf
title: Hyperammina distorta Cushman, 1918

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mmv-2cp-tae
title: Migros flintii (Cushman, 1911)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pns-15k-m3g
title: Pseudobelus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s63-wme-168
title: Acanthocythereis ornata (Müller, 1894)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h46-fe1-ncn
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s1p-zk3-mym
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/szj-7x9-pv5
title: Miliolidae Ehrenberg, 1839

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/brs-m52-346
title: †Marginulina anderseni Hofker, 1983

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jt6-80m-sa9
title: Teschenites

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0jn-yq9-m61
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9w8-spk-m32
title: Sorites orbiculus (Forsskål in Niebuhr, 1775)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lmw-x4e-bk6
title: Lenticulina iota (Cushman, 1923)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dfr-t7k-k6m
title: Globigerinoides conglobatus (Brady, 1879)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mmb-xb2-qbt
title: Saynoceras

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/azw-yae-ysc
title: Laevidentalina subsoluta (Cushman, 1923)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cwm-cae-2nl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l3l-750-rz7
title: Cribroelphidium Cushman & Brönnimann, 1948

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w5l-n4r-f4y
title: Cytheropteron monoceros Bonaduce, Ciampo & Masoli, 1976

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7dt-pkr-3lp
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kwx-asf-pw5
title: Planodiscorbis rarescens (Brady, 1884)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/chb-kv9-268
title: Pseudononion japonicum Asano, 1936

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bx3-9q3-pah
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hzv-91s-5wb
title: Amphistegina d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jr3-sm5-3x9
title: †Terquemia Tate, 1867

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/28n-npc-t1z
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kqm-jwr-f9x
title: †Spiroplectinata Cushman, 1927

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/539-81v-yfr
title: †Astacolus latus (Cornuel, 1848)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/589-yg6-5tl
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fjq-ghb-3p0
title: Cibicidoides umbonatus (Phleger & Parker, 1951)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t03-dpa-asw
title: †Trochammina triloba van Voorthuysen, 1969

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/07p-f3f-9bn
title: Pterygocythereis Blake, 1933

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.29933852
title: Dataset "High-Yield Assembly of Plasmon-Coupled Nanodiamonds using DNA Origami for Tuned Emission"

description: This submitted manuscript "High-Yield Assembly of Plasmon-Coupled Nanodiamonds using DNA Origami for Tuned Emission" is supplemented with datasets that allow independent analysis of the presented results. This README.txt file briefly describes the data. --------------------------------------- "FND characterization" This folder contains all the data shown in the Supplementary Information regarding the fluorescent nanodiamond characterization. It includes - Dynamic Light Scattering and Zeta Potential measurement data - Fluorescence assay data and the calculation of DNA loading on FNDs - Nanoparticle Tracking Analysis measurement data - Thermogravimetric Analysis data - X-ray Photon Spectroscopy data --------------------------------------- "AFM images and analysis" This folder contains all analyzed Atomic Force Microscopy images and a summary of the results for each configuration. Analyzed data and the corresponding imageJ macro for automatic evaluation of annotated images can be provided on request. The subfolders are ordered according to sample configurations and the AFM images named after the agarose gel area from where they are extracted as explained in the manuscript. --------------------------------------- "FLIM analysis" Here, the AFM images for optical characterization areas are provided, as well as the original measurement files. They can be opened and processed via PicoQuant SymPhoTime software. The files contain the analysis used in this manuscript, as well as the instrument response functions and ROIs used for each measurement. --------------------------------------- For further information or questions, please reach out to niklas.hansen@jh-inst.cas.cz, vladimira.petrakova@jh-inst.cas.cz (AFM images/FLIM analysis) or petr.cigler@uochb.cas.cz (FND characterization).
DOI: 10.6084/m9.figshare.29933852.v1
title: Dataset "High-Yield Assembly of Plasmon-Coupled Nanodiamonds using DNA Origami for Tuned Emission"

description: This submitted manuscript "High-Yield Assembly of Plasmon-Coupled Nanodiamonds using DNA Origami for Tuned Emission" is supplemented with datasets that allow independent analysis of the presented results. This README.txt file briefly describes the data. --------------------------------------- "FND characterization" This folder contains all the data shown in the Supplementary Information regarding the fluorescent nanodiamond characterization. It includes - Dynamic Light Scattering and Zeta Potential measurement data - Fluorescence assay data and the calculation of DNA loading on FNDs - Nanoparticle Tracking Analysis measurement data - Thermogravimetric Analysis data - X-ray Photon Spectroscopy data --------------------------------------- "AFM images and analysis" This folder contains all analyzed Atomic Force Microscopy images and a summary of the results for each configuration. Analyzed data and the corresponding imageJ macro for automatic evaluation of annotated images can be provided on request. The subfolders are ordered according to sample configurations and the AFM images named after the agarose gel area from where they are extracted as explained in the manuscript. --------------------------------------- "FLIM analysis" Here, the AFM images for optical characterization areas are provided, as well as the original measurement files. They can be opened and processed via PicoQuant SymPhoTime software. The files contain the analysis used in this manuscript, as well as the instrument response functions and ROIs used for each measurement. --------------------------------------- For further information or questions, please reach out to niklas.hansen@jh-inst.cas.cz, vladimira.petrakova@jh-inst.cas.cz (AFM images/FLIM analysis) or petr.cigler@uochb.cas.cz (FND characterization).
DOI: 10.15468/dl.ncx655
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-96.32218 15.53360,-83.96057 15.53360,-83.96057 20.48335,-96.32218 20.48335,-96.32218 15.53360))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bassariscus sumichrasti"
 ]
}

 The dataset includes 143 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020009-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/dg6-0py-zs4
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yy1-vpb-3yv
title: Pseudothurmannia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1cb-vb4-s2k
title: Siphogenerina dimorpha (Parker & Jones, 1865)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1xg-nc5-tc8
title: Hibolithes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2l1-gk4-8cv
title: Vaginulinopsis planata (Phleger & Parker, 1951)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/51m-by0-601
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25921/6fmy-a653
title: NOAA/WDS Paleoclimatology - North Pacific Ocean Geochemistry and Sea Surface Temperature Reconstructions during the last 27 kyr

description: Piston core PC6 (40°N, 143°E) provides the first record of biological production and alkenone sea surface temperature (SST) in the mixed water region (MWR) off Sanriku, Japan, in the northwestern North Pacific over the last 27 kyr. Biogenic opal content was low until the early Holocene, and rapidly increased at 6 calendar kiloyears before present (cal kyr BP). Low biological production in the MWR resulted from the reduced duration of the phytoplankton bloom during the glacial period (27–18 cal kyr BP), and from nutrient depletion, especially silica, during the deglaciation (15–9.5 cal kyr BP). In spite of the decreased amount of nutrients in the Oyashio water, biological production increased in the late Holocene (6 cal kyr BP–present). The data revealed that nutrients supplied from deeper levels by eddies played an important role in biological production in the MWR, contrary to the conventional concept that the Oyashio current has controlled productivity in this region. Alkenone-SST during the glacial period was on average 13.6 °C, which is close to the modern SST (14.6 °C) in June, but this timing is not consistent with the CLIMAP results (13.4–14.3 °C in August). This result indicates that alkenone-SST recorded not late spring but summer temperatures, owing to a bloom shift caused by surface water cooling during the last glacial period. Alkenone-SST was even lower during the deglaciation than during the LGM and reached a minimum (9.4 °C) at 14.0 cal kyr BP. δ15N was very high during the deglaciation, implying that nutrients in the euphotic zone were depleted around the core site. Nutrient stress probably had a physiological impact on coccolithophorids and resulted in the apparent minimum alkenone-SST. These findings indicate that the reconstruction of SST by alkenones can sometimes be very complex and possibly misleading.
description: Metadata are from the Temperature-12k project (https://doi.org/10.25921/4RY2-G808). Data are from Table 2 of Minoshima et al. 2007 (https://doi.org/10.1016/j.palaeo.2007.06.022).
DOI: 10.25921/6e2p-x626
title: NOAA/WDS Paleoclimatology - Guliya Ice Cap, Tibetan Plateau 174 Year Stable Isotope, Major Ion and Dust Data

description: Records of recent climate from ice cores drilled in 2015 on the Guliya ice cap in the western Kunlun Mountains of the Tibetan Plateau, which with the Himalaya comprises the Third Pole (TP), demonstrate that this region has become warmer and moister since at least the middle of the 19th century. Decadal-scale linkages are suggested between ice core temperature and snowfall proxies, North Atlantic oceanic and atmospheric processes, Arctic temperatures, and Indian summer monsoon intensity. Correlations between annual-scale oxygen isotopic ratios (d18O) and tropical western Pacific and Indian Ocean sea surface temperatures are also demonstrated. Comparisons of climate records during the last millennium from ice cores acquired throughout the TP illustrate centennial-scale differences between monsoon and westerlies dominated regions. Among these records, Guliya shows the highest rate of warming since the end of the Little Ice Age, but d18O data over the last millennium from TP ice cores support findings that elevation-dependent warming is most pronounced in the Himalaya. This, along with the decreasing precipitation rates in the Himalaya region, is having detrimental effects on the cryosphere. Although satellite monitoring of glaciers on the TP indicates changes in surface area, only a few have been directly monitored for mass balance and ablation from the surface. This type of ground-based study is essential to obtain a better understanding of the rate of ice shrinkage on the TP.
description: Ice core major ions (Cl-, NO3-, SO42-, Na+, NH4+, K+, Mg2+), stable isotope (d18O, d excess), and dust concentration data from Guliya Plateau ice cores 1 and 2 for 1840-2014 CE.  Raw data by depth and annualized values are presented.