cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12877939
title: Additional file 2 of Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize

description: Additional file 2:Sequence identity matrix of maize ARF proteins. BioEdit program were employed to examine sequence identity of 31 maize ARF proteins.a (XLS 24 KB)
DOI: 10.6084/m9.figshare.12877939.v1
title: Additional file 2 of Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize

description: Additional file 2:Sequence identity matrix of maize ARF proteins. BioEdit program were employed to examine sequence identity of 31 maize ARF proteins.a (XLS 24 KB)
DOI: 10.6084/m9.figshare.12877942
title: Additional file 3 of Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize

description: Additional file 3:Sequence alignment maize ARF proteins. Clustal_X program were employed to examine sequence features of 31 maize ARF domains. (RTF 3 MB)
DOI: 10.6084/m9.figshare.12877942.v1
title: Additional file 3 of Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize

description: Additional file 3:Sequence alignment maize ARF proteins. Clustal_X program were employed to examine sequence features of 31 maize ARF domains. (RTF 3 MB)
DOI: 10.6084/m9.figshare.12877948
title: Additional file 5 of Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize

description: Additional file 5:Promoter analysis of maize ARFs. Auxin response elements are shown in the list. (XLS 20 KB)
DOI: 10.6084/m9.figshare.12877948.v1
title: Additional file 5 of Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize

description: Additional file 5:Promoter analysis of maize ARFs. Auxin response elements are shown in the list. (XLS 20 KB)
DOI: 10.5281/zenodo.4291305
title: Supplementary data for the manuscript "Gas-to-Particle Partitioning of Cyclohexene- and α-Pinene Derived Highly Oxygenated Dimers Evaluated Using COSMOtherm"

description: Input files for COSMO<em>therm </em>calculations presented in Hyttinen et al. Gas-to-Particle Partitioning of Cyclohexene- and α-Pinene Derived Highly Oxygenated Dimers Evaluated Using COSMO<em>therm, J. Phys. Chem. A</em> <strong>2021</strong>, https://doi.org/10.1021/acs.jpca.0c11328: cyclohexene- and α-pinene-derived highly oxygenated dimers, cyclobutane- and cyclopentane-derived dimers, α-pinene+O<sub>3</sub> monomers and dimers
DOI: 10.5281/zenodo.4291304
title: Supplementary data for the manuscript "Gas-to-Particle Partitioning of Cyclohexene- and α-Pinene Derived Highly Oxygenated Dimers Evaluated Using COSMOtherm"

description: Input files for COSMO<em>therm </em>calculations presented in Hyttinen et al. Gas-to-Particle Partitioning of Cyclohexene- and α-Pinene Derived Highly Oxygenated Dimers Evaluated Using COSMO<em>therm, J. Phys. Chem. A</em> <strong>2021</strong>, https://doi.org/10.1021/acs.jpca.0c11328: cyclohexene- and α-pinene-derived highly oxygenated dimers, cyclobutane- and cyclopentane-derived dimers, α-pinene+O<sub>3</sub> monomers and dimers
DOI: 10.6084/m9.figshare.12875511.v23
title: Additional file of Analysis of common bean expressed sequence tags identifies sulfur metabolic pathways active in seed and sulfur-rich proteins highly expressed in the absence of phaseolin and major lectins

description: Additional file of Analysis of common bean expressed sequence tags identifies sulfur metabolic pathways active in seed and sulfur-rich proteins highly expressed in the absence of phaseolin and major lectins
DOI: 10.6084/m9.figshare.12875490.v1
title: Additional file 3 of Analysis of common bean expressed sequence tags identifies sulfur metabolic pathways active in seed and sulfur-rich proteins highly expressed in the absence of phaseolin and major lectins

description: Additional file 3:Legumin (A) and albumin-2 (B) tryptic peptides identified by de novo sequencing of LC-MS/MS data; Identification of purified proteins after size exclusion chromatography: group 3 late embryogenesis abundant protein (C); legumin precursor (D), α- -54.8 kD (E), β- (F), and α- -44.0 and 42.7 kD (G) subunits. (XLS 68 KB)
DOI: 10.6084/m9.figshare.12875490
title: Additional file 3 of Analysis of common bean expressed sequence tags identifies sulfur metabolic pathways active in seed and sulfur-rich proteins highly expressed in the absence of phaseolin and major lectins

description: Additional file 3:Legumin (A) and albumin-2 (B) tryptic peptides identified by de novo sequencing of LC-MS/MS data; Identification of purified proteins after size exclusion chromatography: group 3 late embryogenesis abundant protein (C); legumin precursor (D), α- -54.8 kD (E), β- (F), and α- -44.0 and 42.7 kD (G) subunits. (XLS 68 KB)
DOI: 10.6084/m9.figshare.12877429.v17
title: Additional file of Development of the piggyBac transposable system for Plasmodium berghei and its application for random mutagenesis in malaria parasites

description: Additional file of Development of the piggyBac transposable system for Plasmodium berghei and its application for random mutagenesis in malaria parasites
DOI: 10.6084/m9.figshare.12877429.v18
title: Additional file of Development of the piggyBac transposable system for Plasmodium berghei and its application for random mutagenesis in malaria parasites

description: Additional file of Development of the piggyBac transposable system for Plasmodium berghei and its application for random mutagenesis in malaria parasites
DOI: 10.6084/m9.figshare.12877402.v1
title: Additional file 1 of Development of the piggyBac transposable system for Plasmodium berghei and its application for random mutagenesis in malaria parasites

description: Additional file 1: Description of piggyBac insertions. Column 1: Origin of insertion described as: Parental population.clone.subclone (See main text for description). Column 2: Type of insertion in relation to CDS: 5' UTR, CDS, 3'UTR or more than 1 kb away from the nearest CDS (&gt; 1 kb from CDS). Column 3: Insertion site distance to start ATG of CDS (for 5' UTR and CDS insertions) or from the end (stop codon) of the CDS (for 3' insertions). Column 4: Percentage of locus disrupted (for CDS insertions only) and calculated as the percentage of the locus (including introns) occurring after the insertion site. Column 5: Pb locus identifier as used by the Sanger Center (two first digits indicate chromosomal location on the 14 P. berghei chromosomes). Column 6: Insertion site sequence (TTAA) with the adjacent 20 5' and 3' nucleotides. Column 7: Gene description as provided by the Sanger Center. (XLS 46 KB)
DOI: 10.6084/m9.figshare.12877405.v1
title: Additional file 2 of Development of the piggyBac transposable system for Plasmodium berghei and its application for random mutagenesis in malaria parasites

description: Additional file 2: A characteristic of piggyBac inserts in 5'UTR and coding sequences (CDS and introns) of the P. berghei genome. Column 1: Type of insertion in relation to CDS: 5' UTR or CDS. Column 2: Pb locus identifier as used by the Sanger Center (two first digits indicate chromosomal location on the 14 P. berghei chromosomes). Column 3: Identifier for P. falciparum orthologs. Column 4: Gene description as provided by the Sanger Center. Column 5: Targeted disruption attempted (See column 8 for reference to study). Column 6: Exclusive expression in gametocytes/oocysts/sporozoites ([7, 8]). Column 7: Other details regarding gene. Column 8: References to targeted disruption or expression of gene. Column 9: Origin of insertion described as: Parental population.clone.subclone (See main text for further description). Column 10: RMgmDB (RMgmDB; [42, 22]) number assigned to disruption. (XLS 32 KB)
DOI: 10.6084/m9.figshare.12877402
title: Additional file 1 of Development of the piggyBac transposable system for Plasmodium berghei and its application for random mutagenesis in malaria parasites

description: Additional file 1: Description of piggyBac insertions. Column 1: Origin of insertion described as: Parental population.clone.subclone (See main text for description). Column 2: Type of insertion in relation to CDS: 5' UTR, CDS, 3'UTR or more than 1 kb away from the nearest CDS (&gt; 1 kb from CDS). Column 3: Insertion site distance to start ATG of CDS (for 5' UTR and CDS insertions) or from the end (stop codon) of the CDS (for 3' insertions). Column 4: Percentage of locus disrupted (for CDS insertions only) and calculated as the percentage of the locus (including introns) occurring after the insertion site. Column 5: Pb locus identifier as used by the Sanger Center (two first digits indicate chromosomal location on the 14 P. berghei chromosomes). Column 6: Insertion site sequence (TTAA) with the adjacent 20 5' and 3' nucleotides. Column 7: Gene description as provided by the Sanger Center. (XLS 46 KB)
DOI: 10.6084/m9.figshare.12877405
title: Additional file 2 of Development of the piggyBac transposable system for Plasmodium berghei and its application for random mutagenesis in malaria parasites

description: Additional file 2: A characteristic of piggyBac inserts in 5'UTR and coding sequences (CDS and introns) of the P. berghei genome. Column 1: Type of insertion in relation to CDS: 5' UTR or CDS. Column 2: Pb locus identifier as used by the Sanger Center (two first digits indicate chromosomal location on the 14 P. berghei chromosomes). Column 3: Identifier for P. falciparum orthologs. Column 4: Gene description as provided by the Sanger Center. Column 5: Targeted disruption attempted (See column 8 for reference to study). Column 6: Exclusive expression in gametocytes/oocysts/sporozoites ([7, 8]). Column 7: Other details regarding gene. Column 8: References to targeted disruption or expression of gene. Column 9: Origin of insertion described as: Parental population.clone.subclone (See main text for further description). Column 10: RMgmDB (RMgmDB; [42, 22]) number assigned to disruption. (XLS 32 KB)
DOI: 10.6084/m9.figshare.12876631.v30
title: Additional file of Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains

description: Additional file of Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains
DOI: 10.6084/m9.figshare.12876616
title: Additional file 5 of Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains

description: Additional file 5: GO Biological Process enrichment in top variable genes. Results obtained from a Gene ontology (GO) term enrichment analysis performed to determine the over-representation of Biological Processes among the top variable genes (FatiScan). The list of genes was ranked according to the average deviation from the mean relative expression measured among the yeast strains studied. (XLS 80 KB)
DOI: 10.6084/m9.figshare.12876616.v1
title: Additional file 5 of Expression variability of co-regulated genes differentiates Saccharomyces cerevisiae strains

description: Additional file 5: GO Biological Process enrichment in top variable genes. Results obtained from a Gene ontology (GO) term enrichment analysis performed to determine the over-representation of Biological Processes among the top variable genes (FatiScan). The list of genes was ranked according to the average deviation from the mean relative expression measured among the yeast strains studied. (XLS 80 KB)
DOI: 10.6084/m9.figshare.12875853.v23
title: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

description: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
DOI: 10.6084/m9.figshare.12875853.v24
title: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

description: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
DOI: 10.6084/m9.figshare.12875853.v22
title: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

description: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
DOI: 10.6084/m9.figshare.12875853.v27
title: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

description: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
DOI: 10.6084/m9.figshare.12875853.v26
title: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

description: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
DOI: 10.6084/m9.figshare.12875853.v28
title: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

description: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
DOI: 10.6084/m9.figshare.12875853
title: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

description: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
DOI: 10.6084/m9.figshare.12875853.v30
title: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

description: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
DOI: 10.6084/m9.figshare.12875853.v29
title: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

description: Additional file of Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems
DOI: 10.6084/m9.figshare.12875958.v22
title: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR
DOI: 10.6084/m9.figshare.12875958.v23
title: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR
DOI: 10.6084/m9.figshare.12875958.v28
title: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR
DOI: 10.6084/m9.figshare.12875958.v29
title: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR
DOI: 10.6084/m9.figshare.12875958.v30
title: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR
DOI: 10.6084/m9.figshare.12875958.v31
title: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR
DOI: 10.6084/m9.figshare.12875913.v1
title: Additional file 14 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 14: List of the GPCRs differentially expressed in CGNs incubated in 5 (K5) or 25 (K25) mM KCl for 4 hours. An Excel file that lists the names of those GPCRs differentially expressed, expression values and fold-change. (XLS 73 KB)
DOI: 10.6084/m9.figshare.12875913
title: Additional file 14 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 14: List of the GPCRs differentially expressed in CGNs incubated in 5 (K5) or 25 (K25) mM KCl for 4 hours. An Excel file that lists the names of those GPCRs differentially expressed, expression values and fold-change. (XLS 73 KB)
DOI: 10.6084/m9.figshare.12875916
title: Additional file 15 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 15: List of GPCRs differentially expressed during the differentiation of CGNs in vitro. An Excel file that lists the names of those GPCRs differentially expressed in at least one condition during the developmental time course, normalized expression values, average and standard deviation (XLS 210 KB)
DOI: 10.6084/m9.figshare.12875916.v1
title: Additional file 15 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 15: List of GPCRs differentially expressed during the differentiation of CGNs in vitro. An Excel file that lists the names of those GPCRs differentially expressed in at least one condition during the developmental time course, normalized expression values, average and standard deviation (XLS 210 KB)
DOI: 10.6084/m9.figshare.12875931
title: Additional file 1 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 1: List of the GPCRs studied in this manuscript. An Excel file listing the names of the GPCRs, as well as aliases, Unigene, Entrez and Ensembl gene ID. (XLS 338 KB)
DOI: 10.6084/m9.figshare.12875934
title: Additional file 2 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 2: Comparison of Taqman®- and SybrGreen®-based detection assays. An Excel file that lists the results of the assays performed to compare commercial Taqman® probes to the SybrGreen®-based detection system used in this study. (XLS 11 KB)
DOI: 10.6084/m9.figshare.12875934.v1
title: Additional file 2 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 2: Comparison of Taqman®- and SybrGreen®-based detection assays. An Excel file that lists the results of the assays performed to compare commercial Taqman® probes to the SybrGreen®-based detection system used in this study. (XLS 11 KB)
DOI: 10.6084/m9.figshare.12875937
title: Additional file 3 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 3: Sequences of the primers used in this manuscript. An Excel file that gives the sequences of the primers used for each GPCR in this study. (XLS 98 KB)
DOI: 10.6084/m9.figshare.12875937.v1
title: Additional file 3 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 3: Sequences of the primers used in this manuscript. An Excel file that gives the sequences of the primers used for each GPCR in this study. (XLS 98 KB)
DOI: 10.6084/m9.figshare.12875940.v1
title: Additional file 4 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 4: Results of the replicated PCR experiments to test for normality of Ct distribution. An Excel file that lists the 9 GPCRs that were used for replicated PCR experiments on genomic DNA as well as the results of the statistical analysis conducted to determine if Ct distributions displayed on Additional files 5, 6, 7, 8, 9, 10, 11, 12 and 13 are Gaussian (XLS 12 KB)
DOI: 10.6084/m9.figshare.12875940
title: Additional file 4 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 4: Results of the replicated PCR experiments to test for normality of Ct distribution. An Excel file that lists the 9 GPCRs that were used for replicated PCR experiments on genomic DNA as well as the results of the statistical analysis conducted to determine if Ct distributions displayed on Additional files 5, 6, 7, 8, 9, 10, 11, 12 and 13 are Gaussian (XLS 12 KB)
DOI: 10.6084/m9.figshare.12875931.v1
title: Additional file 1 of Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR

description: Additional file 1: List of the GPCRs studied in this manuscript. An Excel file listing the names of the GPCRs, as well as aliases, Unigene, Entrez and Ensembl gene ID. (XLS 338 KB)
DOI: 10.25345/c5b51q
title: MassIVE MSV000087231 - Gobal profiling of Ginkgo Biloba leaf extract
title: Untargeted LC-MS/MS analysis of Ginkgo Biloba leaf extract. This dataset contain (+)-ESI mode and (-)-ESI mode LC-MS/MS.
DOI: 10.6084/m9.figshare.14446680.v3
title: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome

description: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome
DOI: 10.6084/m9.figshare.14446680.v9
title: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome

description: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome
DOI: 10.6084/m9.figshare.14446680.v10
title: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome

description: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome
DOI: 10.6084/m9.figshare.14446680.v12
title: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome

description: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome
DOI: 10.6084/m9.figshare.14446680.v11
title: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome

description: Additional file of An initial comparative map of copy number variations in the goat (Capra hircus) genome