cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/vcx5q-dfn40
title: Bacillus subtilis ponA mutant

description: ponA muntant of B. subtilis induced for competence
description: <strong>Tilt Series Date:</strong> 2013-06-28</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> MJ007, ponA null</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> David Dubnau</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells grown in competence medium</p>
<strong>Sample Preparation:</strong> vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-28-9/rawdata/</p>bcomp0011.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-28-9/rawdata/bcomp0011.mrc"
        > <i class="download icon"></i> Download </a></p>

        bcomp0011_full.rec,  Reconstruction (Pixel Size 1.92 nm), 801.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-28-9/3dimage_27742/bcomp0011_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zegyc-vg625
title: 5ug chloramphenicol

description: There may be bacteriophage contamination
description: <strong>Tilt Series Date:</strong> 2013-11-29</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  psa2013-11-29-17_slicer6156.jpg: flat vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-11-29-17/rawdata/</p>atlas20017.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-11-29-17/rawdata/atlas20017.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas20017_part121_8.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-11-29-17/3dimage_35248/atlas20017_part121_8.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/m1j9x-bky27
title: 7.5% PEG CF411V

description: 7.5% PEG CF411V
description: <strong>Tilt Series Date:</strong> 2014-09-30</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -5.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-09-30-9/rawdata/</p>PEGA411V6defocus0002_mcorr.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-09-30-9/rawdata/PEGA411V6defocus0002_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        PEGA411V6defocus0002_mcorr_part61_2.rec,  Reconstruction (Pixel Size 1.28 nm), 430.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-09-30-9/3dimage_46844/PEGA411V6defocus0002_mcorr_part61_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/pms12-gv496
title: JT5_cellulosome

description: Cellulosome
description: <strong>Tilt Series Date:</strong> 2013-06-26</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacteroidetes</p>
<strong>Strain:</strong> JT5-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-30.0°, 30.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> ZAS-1</p>
  etl2013-06-26-8_slicer5270.jpg: nested vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-26-8/rawdata/</p>JT5_18K0009.mrc,  Tilt Series (Pixel Size 0.59 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-26-8/rawdata/JT5_18K0009.mrc"
        > <i class="download icon"></i> Download </a></p>

        JT5_18K0009_full.rec,  Reconstruction (Pixel Size 2.36 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-26-8/3dimage_27695/JT5_18K0009_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/qh8dq-f5h82
title: Brucella WT

description: Brucella abortus WT
description: <strong>Tilt Series Date:</strong> 2014-03-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Brucella abortus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sean Crosson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-48/rawdata/</p>BrucellaWT0016.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-48/rawdata/BrucellaWT0016.mrc"
        > <i class="download icon"></i> Download </a></p>

        BrucellaWT0016_part121_7.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-48/3dimage_40260/BrucellaWT0016_part121_7.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/23fv8-47y45
title: E. coli (FB76)

description: Contains MreB-mCherry sandwich fusion as sole source of MreB from WT promoter.
description: <strong>Tilt Series Date:</strong> 2012-05-07</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: None μm,  magnification: 23000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> Gift from Piet de Boer</p>
<strong>Purification / Growth Conditions / Treatment:</strong> LB, 30 Degrees Celsius, OD600 ~ 0.6</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-05-07-16/rawdata/</p>20120508_ple7_control.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-05-07-16/rawdata/20120508_ple7_control.mrc"
        > <i class="download icon"></i> Download </a></p>

        20120508_ple7_control_part130_46.rec,  Reconstruction (Pixel Size 1.9 nm), 825.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-05-07-16/3dimage_18445/20120508_ple7_control_part130_46.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/sfcpe-txx62
title: NLRP3

description: Lysate from macrophages expressing ASC / Caspase-1-CARD / NLRP3-PYD-NBD
description: <strong>Tilt Series Date:</strong> 2014-03-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Macrophage lysate</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Hao Wu</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-4/rawdata/</p>NLRP3_34k0004.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-4/rawdata/NLRP3_34k0004.mrc"
        > <i class="download icon"></i> Download </a></p>

        NLRP3_34k0004_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-17-4/3dimage_40176/NLRP3_34k0004_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/k1v0b-y1c76
title: island delete

description: This is the wild type in which the entire island of genes responsible for magnetosome formation has been deleted
description: <strong>Tilt Series Date:</strong> 2014-12-20</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-20-15/rawdata/</p>island_delete_atlas20001.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-20-15/rawdata/island_delete_atlas20001.mrc"
        > <i class="download icon"></i> Download </a></p>

        island_delete_atlas20001_full.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-20-15/3dimage_49789/island_delete_atlas20001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/8s7sm-5nh47
title: B subtilis bMD204

description: mreB-40aa-sfGFP  sfGFP-11aa-mbl::spec  ΔponA::catNotes from Mike Dion:bMD204 is our "dual-tagged" strain, where mreB is C-terminally tagged and includes a 40 aa linker, while mbl is N-terminally tagged and uses an 11 aa linker. Clumps mildly in liquid LB.  This can be easily disrupted by very mild vortexing, or growing them in the presence of 10 mM MgCl2.  The clumping is the result of their ponA deletion; none of these clumped prior to knocking out ponA.
description: <strong>Tilt Series Date:</strong> 2013-11-16</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> bMD204</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Ethan Garner and Mike Dion</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-11-16-3/rawdata/</p>111613_bs2040003.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-11-16-3/rawdata/111613_bs2040003.mrc"
        > <i class="download icon"></i> Download </a></p>

        111613_bs2040003_full.rec,  Reconstruction (Pixel Size 1.92 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-11-16-3/3dimage_35390/111613_bs2040003_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3a8wm-wxx87
title: Agrobacterium tumefaciens

description: C58 wild type
description: <strong>Tilt Series Date:</strong> 2013-08-01</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 19500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 300uM AS inductant</p>
<strong>Sample Preparation:</strong> Janelia</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-01-35/rawdata/</p>c58_Au_300mM0016.mrc,  Tilt Series (Pixel Size 0.56 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-01-35/rawdata/c58_Au_300mM0016.mrc"
        > <i class="download icon"></i> Download </a></p>

        c58_Au_300mM0016_part121_60.rec,  Reconstruction (Pixel Size 2.24 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-01-35/3dimage_29498/c58_Au_300mM0016_part121_60.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.ppmf86
title: Occurrence Download

description: A dataset containing 1302894 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "GadmGid is CAN.1.16.4_1",
 "TaxonKey is Passeriformes",
 "Year 2002-2024"
 ]
}

 The dataset includes 1302894 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044834-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/5wee3-0xk76
title: magnetosome induced t0.5

description: Raw data files of magnetosome induced t0.5
description: <strong>Tilt Series Date:</strong> 2014-06-19</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  psa2014-06-19-31_slicer9582.jpg: magnetospirillum magneticum .  bullseye psa2014-06-19-31_slicer9584.jpg: Magnetospirillum magneticum .  tube top view psa2014-06-19-31_slicer9586.jpg: Magnetospirillum magneticum .  tube side view
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-19-31/rawdata/</p>atlas70006.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-19-31/rawdata/atlas70006.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas70006_full.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-19-31/3dimage_43807/atlas70006_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.nb4khz
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Schistura melarancia)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044870-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/y8f9y-zpz49
title: HIV capsid

description: B grid
description: <strong>Tilt Series Date:</strong> 2013-11-06</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> HIV cores</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 50.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Wes Sundquist</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-11-06-3/rawdata/</p>hiv_capsid_b10009.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-11-06-3/rawdata/hiv_capsid_b10009.mrc"
        > <i class="download icon"></i> Download </a></p>

        hiv_capsid_b10009_part121_14.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2013-11-06-3/3dimage_34036/hiv_capsid_b10009_part121_14.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.8tdhcx
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gypsophila annamensis",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 146 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044871-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/9ra2z-n4k45
title: 2014Apr13deltarem_27Cplant

description: grow on pure agar plate (just 15% agar, add bacterium drop on plant's root, 27C overnight, take plant for high pressure freeze and take some bacterium for cryo em tomography
description: <strong>Tilt Series Date:</strong> 2014-04-13</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  etl2014-04-13-41_slicer7414.jpg: Type 4 secretion system .  T4SS etl2014-04-13-41_slicer7417.jpg: Unknown
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-04-13-41/rawdata/</p>rem_plant30005.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
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        rem_plant30005_full.rec,  Reconstruction (Pixel Size 1.92 nm), 534.5 MB  
        
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