cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26550775.v1
title: Additional file 8 of Comprehensive analysis of pre-mRNA alternative splicing regulated by m6A methylation in pig oxidative and glycolytic skeletal muscles

description: Additional file 8: Table S7. The identification and annotation of SE-DMAS sites in SOL and EDL.
DOI: 10.6084/m9.figshare.26550766.v1
title: Additional file 5 of Comprehensive analysis of pre-mRNA alternative splicing regulated by m6A methylation in pig oxidative and glycolytic skeletal muscles

description: Additional file 5: Table S4. Differentially expressed genes identified in SOL and EDL.
DOI: 10.15468/dl.ctwrmh
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron calvescens Balf.fil. & Forrest"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063876-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26550781
title: Additional file 10 of Comprehensive analysis of pre-mRNA alternative splicing regulated by m6A methylation in pig oxidative and glycolytic skeletal muscles

description: Additional file 10: Table S9. Differentially AS events identified in si-METTL3 cells.
DOI: 10.6084/m9.figshare.26551003
title: Additional file 2 of Genome-wide differential DNA methylation analysis of MDA-MB-231 breast cancer cells treated with curcumin derivatives, ST08 and ST09

description: Additional file 2. List of genes up/down regulated and having hypo/hyper-methylated promoters post ST08 and ST09 treatment.
DOI: 10.6084/m9.figshare.26551033
title: Additional file 2 of Construction and validation of prognostic signature for hepatocellular carcinoma basing on hepatitis B virus related specific genes

description: Additional file 2. Table S2 The detailed functional enrichment results.
DOI: 10.6084/m9.figshare.26550790.v1
title: Additional file 13 of Comprehensive analysis of pre-mRNA alternative splicing regulated by m6A methylation in pig oxidative and glycolytic skeletal muscles

description: Additional file 13: Table S10. All primer used in this study.
DOI: 10.6084/m9.figshare.26550769
title: Additional file 6 of Comprehensive analysis of pre-mRNA alternative splicing regulated by m6A methylation in pig oxidative and glycolytic skeletal muscles

description: Additional file 6: Table S5. Profiling of regulatory splicing correlation network in SOL and EDL.
DOI: 10.15468/dl.4wdbba
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.764762 -33.245095, 148.764762 -33.24734, 148.769254 -33.24734, 148.769254 -33.245095, 148.764762 -33.245095))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063877-240626123714530/datasets/export for details.
DOI: 10.15468/dl.38g8mr
title: Occurrence Download

description: A dataset listing the 44 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Adelococcus interlatens (Arnold) Matzer & Hafellner, Cornutispora lichenicola D.Hawksw. & B.Sutton, Gyalidea lecideopsis (A.Massal.) Lettau ex Vĕzda, Hobsonia christiansenii B.L.Brady & D.Hawksw., Karsteniomyces llimonae Boqueras & Diederich, Keisslerellum sacromontanum (Strasser) Werner, Laeviomyces pertusariicola (Nyl.) D.Hawksw., Lawalreea lecanorae Diederich, Licea parasitica (Zukal) G.W.Martin, 1942, Megalaria grossa (Pers. ex Nyl.) Hafellner, Megalaria laureri (Hepp ex Th.Fr.) Hafellner, Phacopsis campestricola (Nyl.) Vouaux, 1914, Psammina stipitata D.Hawksw., Rebentischia massalongoi (Mont.) Sacc., Wadeana dendrographa (Nyl.) Coppins & P.James, Wahlenbergiana striatula (Wahlenb.) Gueidan & Thüs, Poetschia buellioides Körb.)"
 ]
}

 The dataset's 44 records were derived from 229 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063862-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a397sf
title: Occurrence Download

description: A dataset containing 1568 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-9.98444 38.27135,-8.39662 38.27135,-8.39662 39.28279,-9.98444 39.28279,-9.98444 38.27135))",
 "HasGeospatialIssue is false",
 "TaxonKey is Boops boops (Linnaeus, 1758)"
 ]
}

 The dataset includes 1568 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002552-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f2xy6b
title: Occurrence Download

description: A dataset containing 185 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-9.88008 38.1821,-8.38396 38.1821,-8.38396 39.30267,-9.88008 39.30267,-9.88008 38.1821))",
 "HasGeospatialIssue is false",
 "TaxonKey is Callionymus lyra Linnaeus, 1758"
 ]
}

 The dataset includes 185 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002554-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xt9xjr
title: Occurrence Download

description: A dataset containing 75920 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arundo donax L."
 ]
}

 The dataset includes 75920 records from 934 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002551-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t2cupu
title: Occurrence Download

description: A dataset containing 1170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-9.7912 38.22949,-8.35194 38.22949,-8.35194 39.25214,-9.7912 39.25214,-9.7912 38.22949))",
 "HasGeospatialIssue is false",
 "TaxonKey is Bothus podas (Delaroche, 1809)"
 ]
}

 The dataset includes 1170 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002559-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vyn2jb
title: Occurrence Download

description: A dataset containing 1978 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachypogon spicatus (L.f.) Kuntze",
 "Continent is Africa"
 ]
}

 The dataset includes 1978 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002555-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rn8dek
title: Occurrence Download

description: A dataset containing 280 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllocoptruta oleivora (Ashmead, 1879)"
 ]
}

 The dataset includes 280 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002558-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ykxcq7
title: Occurrence Download

description: A dataset containing 3505 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prunus avium (L.) L.",
 "HasCoordinate is true",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 3505 records from 258 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002557-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14050336
title: Dataset related to: "Predicting Response to In-Hospital Pulmonary Rehabilitation in Individuals Recovering From Exacerbations of Chronic Obstructive Pulmonary Disease"

description: We provide the raw data used for the following article:

Vitacca M, Malovini A, Paneroni M, Spanevello A, Ceriana P, Capelli A, Murgia R, Ambrosino N. Predicting Response to In-Hospital Pulmonary Rehabilitation in Individuals Recovering From Exacerbations of Chronic Obstructive Pulmonary Disease. Arch Bronconeumol. 2024 Mar;60(3):153-160. English, Spanish. doi: 10.1016/j.arbres.2024.01.001.

Abstract



Background: Predicting the response to pulmonary rehabilitation (PR) could be valuable in defining admission priorities. We aimed to investigate whether the response of individuals recovering from a COPD exacerbation (ECOPD) could be forecasted using machine learning approaches.

Method: This multicenter, retrospective study recorded data on anthropometrics, demographics, physiological characteristics, post-PR changes in six-minute walking distance test (6MWT), Medical Research Council scale for dyspnea (MRC), Barthel Index dyspnea (BId), COPD assessment test (CAT) and proportion of participants reaching the minimal clinically important difference (MCID). The ability of multivariate approaches (linear regression, quantile regression, regression trees, and conditional inference trees) in predicting changes in each outcome measure has been assessed.

Results: Individuals with lower baseline 6MWT, as well as those with less severe airway obstruction or admitted from acute care hospitals, exhibited greater improvements in 6MWT, whereas older as well as more dyspnoeic individuals had a lower forecasted improvement. Individuals with more severe CAT and dyspnea, and lower 6MWT had a greater potential improvement in CAT. More dyspnoeic individuals were also more likely to show improvement in BId and MRC. The Mean Absolute Error estimates of change prediction were 44.70m, 3.22 points, 5.35 points, and 0.32 points for 6MWT, CAT, BId, and MRC respectively. Sensitivity and specificity in discriminating individuals reaching the MCID of outcomes ranged from 61.78% to 98.99% and from 14.00% to 71.20%, respectively.

Conclusion: While the assessed models were not entirely satisfactory, predictive equations derived from clinical practice data might help in forecasting the response to PR in individuals recovering from an ECOPD. Future larger studies will be essential to confirm the methodology, variables, and utility.
DOI: 10.5281/zenodo.14050337
title: Dataset related to: "Predicting Response to In-Hospital Pulmonary Rehabilitation in Individuals Recovering From Exacerbations of Chronic Obstructive Pulmonary Disease"

description: We provide the raw data used for the following article:

Vitacca M, Malovini A, Paneroni M, Spanevello A, Ceriana P, Capelli A, Murgia R, Ambrosino N. Predicting Response to In-Hospital Pulmonary Rehabilitation in Individuals Recovering From Exacerbations of Chronic Obstructive Pulmonary Disease. Arch Bronconeumol. 2024 Mar;60(3):153-160. English, Spanish. doi: 10.1016/j.arbres.2024.01.001.

Abstract



Background: Predicting the response to pulmonary rehabilitation (PR) could be valuable in defining admission priorities. We aimed to investigate whether the response of individuals recovering from a COPD exacerbation (ECOPD) could be forecasted using machine learning approaches.

Method: This multicenter, retrospective study recorded data on anthropometrics, demographics, physiological characteristics, post-PR changes in six-minute walking distance test (6MWT), Medical Research Council scale for dyspnea (MRC), Barthel Index dyspnea (BId), COPD assessment test (CAT) and proportion of participants reaching the minimal clinically important difference (MCID). The ability of multivariate approaches (linear regression, quantile regression, regression trees, and conditional inference trees) in predicting changes in each outcome measure has been assessed.

Results: Individuals with lower baseline 6MWT, as well as those with less severe airway obstruction or admitted from acute care hospitals, exhibited greater improvements in 6MWT, whereas older as well as more dyspnoeic individuals had a lower forecasted improvement. Individuals with more severe CAT and dyspnea, and lower 6MWT had a greater potential improvement in CAT. More dyspnoeic individuals were also more likely to show improvement in BId and MRC. The Mean Absolute Error estimates of change prediction were 44.70m, 3.22 points, 5.35 points, and 0.32 points for 6MWT, CAT, BId, and MRC respectively. Sensitivity and specificity in discriminating individuals reaching the MCID of outcomes ranged from 61.78% to 98.99% and from 14.00% to 71.20%, respectively.

Conclusion: While the assessed models were not entirely satisfactory, predictive equations derived from clinical practice data might help in forecasting the response to PR in individuals recovering from an ECOPD. Future larger studies will be essential to confirm the methodology, variables, and utility.
DOI: 10.15468/dl.n8rver
title: Occurrence Download

description: A dataset containing 126031 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mosquito Occurrence Dataset"
 ]
}

 The dataset includes 126031 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002488-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25413/sun.27633567
title: BioSCape Mapping Units Dataset

description: These data are collected for the NASA-funded BioSCape Project: “Impacts of Invasive Alien Species on Biodiversity and Ecosystem Functioning”. This particular dataset was curated to guide the sampling of the BioSCape Causal Inference Training Dataset and was prepared following these pre-established criteria:Uniform areas are grouped together in terms of four pre-selected environmental variablesEnvironmental variables were selected and categorized to minimize the total number of mapping units (+-150)
DOI: 10.25413/sun.27633567.v1
title: BioSCape Mapping Units Dataset

description: These data are collected for the NASA-funded BioSCape Project: “Impacts of Invasive Alien Species on Biodiversity and Ecosystem Functioning”. This particular dataset was curated to guide the sampling of the BioSCape Causal Inference Training Dataset and was prepared following these pre-established criteria:Uniform areas are grouped together in terms of four pre-selected environmental variablesEnvironmental variables were selected and categorized to minimize the total number of mapping units (+-150)
DOI: 10.5284/1123063
title: Data from an Archaeological Excavation Adjacent to Former Woodview Cottage and Garage (Phase 2), Upton Snodsbury, Worcestershire, July-August 2021

description: This archive includes site photographs, GIS data and spreadsheets from an archaeological excavation undertaken by Worcestershire Archaeology at land adjacent to Woodview Cottage, Upton Snodsbury, Worcestershire (NGR SO 94060 54435) between July and August 2021, covering an area 0.62ha.
DOI: 10.5281/zenodo.14049934
title: Dataset related to: "Upper-limb interval versus constant-load exercise in patients with COPD: a physiological crossover study"

description: We provide the raw data used for the following article:

Paneroni M, Vogiatzis I, Cavicchia A, Salvi B, Bertacchini L, Venturelli M, Vitacca M. Upper-limb interval versus constant-load exercise in patients with COPD: a physiological crossover study. ERJ Open Res. 2024 Feb 26;10(1):00779-2023. doi: 10.1183/23120541.00779-2023. 

Abstract



Objective: Upper-limb exercise is recommended for patients with COPD, albeit there are limited data concerning the optimal modality to implement. We compared interval (INT-EX) to continuous (CONT-EX) upper-limb exercise in terms of exercise tolerance, ventilatory and metabolic responses when both conditions were sustained at an equivalent work rate.

Methods: 26 stable COPD patients undertook three upper-limb exercise sessions to initially establish peak work rate (PWR) via an incremental exercise test and subsequently two equivalent work rate tests to the limit tolerance in balanced order: 1) INT-EX consisting of 30-s work at 100% PWR interspersed with 30-s work at 40% of PWR; and 2) CONT-EX at 70% PWR.

Results: 20 patients (76.9%) had longer tolerance during INT-EX, while six out of 26 (23.1%) exhibited longer tolerance during CONT-EX. The average endurance time was 434.1±184.7 and 315.7±128.7 s for INT-EX and CONT-EX, respectively. During INT-EX at isotime (i.e. when work completed was the same between INT-EX and CONT-EX), the majority of patients manifested lower oxygen uptake, minute ventilation, pulmonary hyperinflation, heart rate, symptoms and higher CO2 blood concentration. Patients with longer INT-EX had a lower comorbidity score (Cumulative Illness Rating Scale: 1.58±0.30 versus 1.88±0.29, p=0.0395) and better-preserved lung function (forced vital capacity 84.7±15.31% versus 67.67±20.56%, p=0.0367; forced expiratory volume in 1 s 57.15±14.59 versus 44.67±12.99% predicted, p=0.0725) compared to patients with longer CONT-EX.

Conclusion: INT-EX is more sustainable than CONT-EX for the majority of COPD patients with moderate obstruction, leading to lower dynamic hyperinflation and symptoms at isotime. Further studies need to define the benefits of its application during pulmonary rehabilitation.
DOI: 10.5281/zenodo.14049935
title: Dataset related to: "Upper-limb interval versus constant-load exercise in patients with COPD: a physiological crossover study"

description: We provide the raw data used for the following article:

Paneroni M, Vogiatzis I, Cavicchia A, Salvi B, Bertacchini L, Venturelli M, Vitacca M. Upper-limb interval versus constant-load exercise in patients with COPD: a physiological crossover study. ERJ Open Res. 2024 Feb 26;10(1):00779-2023. doi: 10.1183/23120541.00779-2023. 

Abstract



Objective: Upper-limb exercise is recommended for patients with COPD, albeit there are limited data concerning the optimal modality to implement. We compared interval (INT-EX) to continuous (CONT-EX) upper-limb exercise in terms of exercise tolerance, ventilatory and metabolic responses when both conditions were sustained at an equivalent work rate.

Methods: 26 stable COPD patients undertook three upper-limb exercise sessions to initially establish peak work rate (PWR) via an incremental exercise test and subsequently two equivalent work rate tests to the limit tolerance in balanced order: 1) INT-EX consisting of 30-s work at 100% PWR interspersed with 30-s work at 40% of PWR; and 2) CONT-EX at 70% PWR.

Results: 20 patients (76.9%) had longer tolerance during INT-EX, while six out of 26 (23.1%) exhibited longer tolerance during CONT-EX. The average endurance time was 434.1±184.7 and 315.7±128.7 s for INT-EX and CONT-EX, respectively. During INT-EX at isotime (i.e. when work completed was the same between INT-EX and CONT-EX), the majority of patients manifested lower oxygen uptake, minute ventilation, pulmonary hyperinflation, heart rate, symptoms and higher CO2 blood concentration. Patients with longer INT-EX had a lower comorbidity score (Cumulative Illness Rating Scale: 1.58±0.30 versus 1.88±0.29, p=0.0395) and better-preserved lung function (forced vital capacity 84.7±15.31% versus 67.67±20.56%, p=0.0367; forced expiratory volume in 1 s 57.15±14.59 versus 44.67±12.99% predicted, p=0.0725) compared to patients with longer CONT-EX.

Conclusion: INT-EX is more sustainable than CONT-EX for the majority of COPD patients with moderate obstruction, leading to lower dynamic hyperinflation and symptoms at isotime. Further studies need to define the benefits of its application during pulmonary rehabilitation.
DOI: 10.15468/dl.xv684e
title: Occurrence Download

description: A dataset containing 1938638 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Asia, Europe)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phasianus colchicus Linnaeus, 1758"
 ]
}

 The dataset includes 1938638 records from 3617 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002493-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4oxreh
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Piaractus mesopotamicus (Holmberg, 1887)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005649-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h4ft6b
title: Occurrence Download

description: A dataset containing 13642 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Monitoreo del Ictioplancton y potenciales Áreas de Desove en el marco del Proyecto Hidroeléctrico Ituango"
 ]
}

 The dataset includes 13642 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041696-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.erejmr
title: Occurrence Download

description: A dataset containing 1847 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melanerpes hypopolius (Wagler, 1829)",
 "Country is Mexico",
 "Geometry POLYGON((-109.6875 22.431340,-111.796875 24.206889,-112.851562 26.431228,-114.433593 27.527758,-114.257812 28.613459,-116.894531 31.952162,-114.785156 32.398515,-107.929687 31.353636,-105.996093 30.902224,-103.183593 28.921631,-102.304687 29.840643,-97.734375 25.641526,-96.503906 19.973348,-92.8125 18.646245,-89.648437 21.289374,-86.484375 20.797201,-88.945312 17.978733,-90.878906 17.308687,-90.527343 16.299051,-91.933593 15.114552,-93.867187 15.623036,-97.03125 15.284185,-102.480468 17.644022,-105.292968 20.468189,-107.226562 23.725011,-109.160156 25.799891,-111.269531 27.994401,-113.378906 30.751277,-114.785156 30.902224,-112.5 27.839076,-111.093749 25.641526,-109.511718 23.402764,-109.6875 22.431340))"
 ]
}

 The dataset includes 1847 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005649-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d8p94q
title: Occurrence Download

description: A dataset containing 92293 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mustela erminea Linnaeus, 1758",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 92293 records from 513 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009499-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kixy2a
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ventenata dubia (Leers) Coss. & Durieu",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-138.96 1.85,-138.96 58.22,-28.74 58.22,-28.74 1.85,-138.96 1.85))"
 ]
}

 The dataset includes 102 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005650-160803222355964/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.