cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3840702.v1
title: 83-gene (CDS) matrix

description: Concatenated alignment of 83 genes (CDS) for Wei et al. article, 'Chloroplast phylogenomics provides better resolutions for the deep phylogenetic relationships among eupolypod II ferns in the context of rapid radiation and rate variation', submitted to Cladistics.<br>This version excludes all introns in relevant genes.<br>
DOI: 10.7910/dvn/v1rjpf/vatfjx
title: mea20150226_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840693
title: Research Paper Data Set

description: PONE-D-16-24013R1<br>Optimizing SIEM Throughput on the Cloud Using Parallelization
DOI: 10.7910/dvn/v1rjpf/b1rury
title: mea20151225_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840696.v1
title: GWAS summary statistics on Major Depressive Disorder

description: This file contains the summary statistics from genome wide association study of Major Depressive Disorder in 10,640 Han Chinese women in the CONVERGE Consortium
DOI: 10.7910/dvn/v1rjpf/y9e3yr
title: mea20150130_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840693.v1
title: Arc 3.png

description: PONE-D-16-24013R1<br>Optimizing SIEM Throughput on the Cloud Using Parallelization
DOI: 10.7910/dvn/v1rjpf/wg9yv5
title: mea20150113_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840693.v2
title: Arc 3.png

description: PONE-D-16-24013R1<br>Optimizing SIEM Throughput on the Cloud Using Parallelization
DOI: 10.7910/dvn/v1rjpf/kjlqil
title: mea20160723_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/1kihsg
title: mea20150626_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840693.v3
title: Arc 3.png

description: PONE-D-16-24013R1<br>Optimizing SIEM Throughput on the Cloud Using Parallelization
DOI: 10.7910/dvn/v1rjpf/nytnpx
title: mea20160516_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840693.v4
title: Arc 3.png

description: PONE-D-16-24013R1<br>Optimizing SIEM Throughput on the Cloud Using Parallelization
DOI: 10.6084/m9.figshare.3840693.v6
title: Research Paper Data Set

description: PONE-D-16-24013R1<br>Optimizing SIEM Throughput on the Cloud Using Parallelization
DOI: 10.7910/dvn/v1rjpf/yjlcu1
title: mea20160302_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840693.v5
title: Arc 3.png

description: PONE-D-16-24013R1<br>Optimizing SIEM Throughput on the Cloud Using Parallelization
DOI: 10.7910/dvn/v1rjpf/yowfv5
title: mea20161030_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/i7mhsp
title: mea20150612_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840657
title: Multiple Testing in Regression Models With Applications to Fault Diagnosis in the Big Data Era

description: Motivated by applications to root-cause identification of faults in multistage manufacturing processes that involve a large number of tools or equipment at each stage, we consider multiple testing in regression models whose outputs represent the quality characteristics of a multistage manufacturing process. Because of the large number of input variables that correspond to the tools or equipments used, this falls in the framework of regression modeling in the modern era of big data. On the other hand, with quick fault detection and diagnosis followed by tool rectification, sparsity can be assumed in the regression model. We introduce a new approach to address the multiple testing problem and demonstrate its advantages over existing methods. We also illustrate its performance in an application to semiconductor wafer fabrication that motivated this development. Supplementary materials for this article are available online.
DOI: 10.7910/dvn/v1rjpf/mhnncp
title: mea20160612_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/gbs8cm
title: mea20150112_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840657.v1
title: Multiple Testing in Regression Models with Applications to Fault Diagnosis in Big Data Era

description: Motivated by applications to root-cause identification of faults in multistage manufacturing processes which involve a large number of tools or equipments at each stage, we consider multiple testing in regression models whose outputs represent the quality characteristics of a multistage manufacturing process. Because of the large number of input variables that correspond to the tools or equipments used, this falls in the framework of regression modeling in the modern era of big data. On the other hand, with quick fault detection and diagnosis followed by tool rectification, sparsity can be assumed in the regression model. We introduce a new approach to address the multiple testing problem and demonstrate its advantages over existing methods. We also illustrate its performance in an application to semiconductor wafer fabrication that motivated this development.
DOI: 10.7910/dvn/v1rjpf/vveft4
title: mea20151229_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/fzfgfe
title: mea20160429_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/ic7gqz
title: mea20160701_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/dscyn2
title: mea20160817_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/a3jrqc
title: mea20151007_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/8jqxpa
title: mea20161121_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/ofmikf
title: mea20150828_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/gbqzzn
title: mea20150227_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840633
title: Tracking children with acute lymphoblastic leukemia who abandoned therapy: Experience, challenges, parental perspectives, and impact of treatment subsidies and intensified counseling

description: Refusal for treatment and therapy abandonment are important reasons for unfavorable outcome of childhood acute lymphoblastic leukemia (ALL) in resource-poor countries. The present study, conducted on children with ALL whose treatment was abandoned, attempted to track all these children to ascertain the causes and outcome of therapy abandonment/refusal. In order to improve outcome of ALL, measures to prevent abandonment were introduced in the form of treatment subsidies and intensified multistage counseling. Of the 77 (of 418) children abandoning therapy, 17 (22%) refused upfront, whereas the rest abandoned during various phases of chemotherapy. Only 39 (50.6%) of these 77 families could be subsequently contacted. Financial problems, too many dependents at home, and wrong perceptions about cancer led to abandonment in majority. Children abandoning treatment before completion of induction had a significantly shorter survival than who abandoned post induction (<i>P</i> &lt; .0001). Intensified preabandonment counseling and subsidized treatment led to significant reduction in abandonment rates (<i>P</i> &lt; .0001).
DOI: 10.6084/m9.figshare.3840633.v1
title: Tracking children with acute lymphoblastic leukemia who abandoned therapy: Experience, challenges, parental perspectives, and impact of treatment subsidies and intensified counseling

description: Refusal for treatment and therapy abandonment are important reasons for unfavorable outcome of childhood acute lymphoblastic leukemia (ALL) in resource-poor countries. The present study, conducted on children with ALL whose treatment was abandoned, attempted to track all these children to ascertain the causes and outcome of therapy abandonment/refusal. In order to improve outcome of ALL, measures to prevent abandonment were introduced in the form of treatment subsidies and intensified multistage counseling. Of the 77 (of 418) children abandoning therapy, 17 (22%) refused upfront, whereas the rest abandoned during various phases of chemotherapy. Only 39 (50.6%) of these 77 families could be subsequently contacted. Financial problems, too many dependents at home, and wrong perceptions about cancer led to abandonment in majority. Children abandoning treatment before completion of induction had a significantly shorter survival than who abandoned post induction (<i>P</i> &lt; .0001). Intensified preabandonment counseling and subsidized treatment led to significant reduction in abandonment rates (<i>P</i> &lt; .0001).
DOI: 10.7910/dvn/v1rjpf/iwsof7
title: mea20161125_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/layak3
title: mea20150409_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/o5grit
title: mea20161104_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840615
title: Realisation of linear time-varying systems

description: In this paper, the realisation problem of linear multi-input multi-output, time-varying systems is studied. The approach, based on the theory of non-commutative polynomial rings, yields explicit and simple formulas for computation of the state coordinates as well as for state equations in observable canonical form. The formulas are based on (left) Euclidean polynomial division.
DOI: 10.6084/m9.figshare.3840615.v1
title: Realisation of linear time-varying systems

description: In this paper, the realisation problem of linear multi-input multi-output, time-varying systems is studied. The approach, based on the theory of non-commutative polynomial rings, yields explicit and simple formulas for computation of the state coordinates as well as for state equations in observable canonical form. The formulas are based on (left) Euclidean polynomial division.
DOI: 10.7910/dvn/v1rjpf/fxndpu
title: mea20151012_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/p0y9zj
title: mea20150303_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/fxlwaj
title: mea20150310_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/netnhq
title: mea20160919_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/qtiu7d
title: mea20150821_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840546
title: Body representations in schizophrenia: an alteration of body structural description is common to people with schizophrenia while alterations of body image worsen with passivity symptoms

description: <i>Introduction:</i> Individuals with schizophrenia, particularly those with passivity symptoms, often feel that their actions and thoughts are controlled by an external agent. Recent evidence has elucidated the role of body representations in the aetiology of passivity symptoms, yet one representation – body structural description – has not yet been examined. Additionally, body image has rarely been examined outside of bodily illusions (e.g., rubber hand experiments) and external validation is required. <i>Methods:</i> Body structural description was assessed with an in-between task and a matching body parts by location task, and body image with a questionnaire examining body distortion experiences (containing subscales assessing boundary loss, depersonalisation and body size distortions). Individuals with schizophrenia (20 with current, 12 with past and 21 with no history of passivity symptoms) and 48 healthy controls participated in the study. <i>Results:</i> People with schizophrenia (as a group) made more errors on the in-between task, but not on the matching body parts by location task. Individuals with current passivity symptoms reported greater distortions on all subscales relative to the other clinical samples, except for experiences of boundary loss which were common to both passivity symptom groups. <i>Conclusions:</i> The results indicate that body structural description may be altered in schizophrenia generally and body image alterations are worsened in passivity symptoms, and these alterations likely contribute to the emergence of passivity symptoms.
DOI: 10.6084/m9.figshare.3840546.v1
title: Body representations in schizophrenia: an alteration of body structural description is common to people with schizophrenia while alterations of body image worsen with passivity symptoms

description: <i>Introduction:</i> Individuals with schizophrenia, particularly those with passivity symptoms, often feel that their actions and thoughts are controlled by an external agent. Recent evidence has elucidated the role of body representations in the aetiology of passivity symptoms, yet one representation – body structural description – has not yet been examined. Additionally, body image has rarely been examined outside of bodily illusions (e.g., rubber hand experiments) and external validation is required. <i>Methods:</i> Body structural description was assessed with an in-between task and a matching body parts by location task, and body image with a questionnaire examining body distortion experiences (containing subscales assessing boundary loss, depersonalisation and body size distortions). Individuals with schizophrenia (20 with current, 12 with past and 21 with no history of passivity symptoms) and 48 healthy controls participated in the study. <i>Results:</i> People with schizophrenia (as a group) made more errors on the in-between task, but not on the matching body parts by location task. Individuals with current passivity symptoms reported greater distortions on all subscales relative to the other clinical samples, except for experiences of boundary loss which were common to both passivity symptom groups. <i>Conclusions:</i> The results indicate that body structural description may be altered in schizophrenia generally and body image alterations are worsened in passivity symptoms, and these alterations likely contribute to the emergence of passivity symptoms.
DOI: 10.7910/dvn/v1rjpf/7gzmj0
title: mea20160426_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/ozfscv
title: mea20161006_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/kut7id
title: mea20151214_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/yul0mg
title: mea20160325_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840531
title: The diversity of plants correlating to the amount of grass covered within the grasslands of York University

description: <b>Hypothesis:</b>As the amount of diversity of plants within a quadrat increases, the amount of grass would decrease.<b><br></b><b>Predictions:</b>1. When there are many types of plants within a quadrat, there plants would cover more of the quadrat area therefore less grass covering.2. When there are few types of plants within a quadrat, there would be less plant cover within the quadrat therefore more grass covering. <b><br></b><b>Methods:</b>A quadrat was dropped at random areas within the grassland, the number of diverse plants was calculated by visually analyzing. The amount of plants were estimated in percentage along with the amount of grass covering calculated relative to one another in the quadrat. The abundance was calculated by estimating the amount of grass within a quadrat and then adding that value to the amount of plants also within the quadrat This process was repeated 25 times. <br><b>Meta Data:</b><br>Diversity - visually identifying the different plants present within the quadrat and quantifying the amount of diverse plants within the specific quadrant.<br>Abundance - the amount of grass covering a quarter of the quadrat was estimated and then multiplied by four. This value was then added to the number of plants also within the quadrat. <br>Total grass cover - visually analyzing and comparing the amount of plant versus the amount of grass covering the quadrat where a value was estimated. <br>Total plant cover - after visually analyzing and estimating a percentage for the total grass cover, the percentage for plant cover was calculated relative to the total grass cover.
DOI: 10.7910/dvn/v1rjpf/n6besx
title: mea20150618_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840531.v1
title: The diversity of plants correlating to the amount of grass covered within the grasslands of York University

description: <b>Hypothesis:</b>As the amount of diversity of plants within a quadrat increases, the amount of grass would decrease.<b><br></b><b>Predictions:</b>1. When there are many types of plants within a quadrat, there plants would cover more of the quadrat area therefore less grass covering.2. When there are few types of plants within a quadrat, there would be less plant cover within the quadrat therefore more grass covering. <b><br></b><b>Methods:</b>A quadrat was dropped at random areas within the grassland, the number of diverse plants was calculated by visually analyzing. The amount of plants were estimated in percentage along with the amount of grass covering calculated relative to one another in the quadrat. The abundance was calculated by estimating the amount of grass within a quadrat and then adding that value to the amount of plants also within the quadrat This process was repeated 25 times. <br><b>Meta Data:</b><br>Diversity - visually identifying the different plants present within the quadrat and quantifying the amount of diverse plants within the specific quadrant.<br>Abundance - the amount of grass covering a quarter of the quadrat was estimated and then multiplied by four. This value was then added to the number of plants also within the quadrat. <br>Total grass cover - visually analyzing and comparing the amount of plant versus the amount of grass covering the quadrat where a value was estimated. <br>Total plant cover - after visually analyzing and estimating a percentage for the total grass cover, the percentage for plant cover was calculated relative to the total grass cover.
DOI: 10.7910/dvn/v1rjpf/icrc5a
title: mea20150904_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/xxxmj8
title: mea20160626_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/mritk9
title: mea20150111_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840519
title: lab2FieldTrainingwithPlants.csv

description: Hypothesis: It was hypothesised that the distance measured between adult trees would affect tree diameter because of space required for optimal growth. <br>Prediction 1: As distance between each adult tree decreases, diameter of each adult tree also decreases.<br>Prediction 2: As distance between adult trees increases, tree diameter simultaneously increases. <br>Prediction 3: Distance between adult trees has no affect on tree diameter.<br>Methods: Data was collected in the York University woodlot during the afternoon with sunny conditions. In order to assess the patterns between tree distance and tree diameter, 10 pairs of adult trees were used in which the variables included distance between each tree, diameter of each tree and the conditions in which they were in (living, dead, huge green canopy). Tree size was determined by ensuring that the standard to which tree sample would count as an adult tree was greater than 5 cm. Distance between 10 pairs of trees were measured using transect measuring tapes in centimetres. Observations were recorded. Ensured that the measurements between trees were done with only adult trees larger than 5 cm. Measurements were done with tape pressed flat on the ground facing up to the nearest flat point of the next adult tree. The diameter of each adult tree was recorded using a tape measure in centimetres. The tape measure was held up in front of the tree horizontally recording from the far left end of the tree to the far right end to ensure that the width was correctly measured. the condition of the adult tree was placed on a scale in which 0 meant the tree was dead, 1 meant that it was living and 2 meant that it resulted in a green canopy overhead to thus result in the absence of light or sky visibility. The conditions of the trees were measured by observing whether the tree appeared alive or dead. If it was observed as alive, it was further examined to ensure whether it formed a huge green canopy. <br><br>
DOI: 10.7910/dvn/v1rjpf/xmarxl
title: mea20160417_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/vliafi
title: mea20151219_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.3840519.v1
title: lab2FieldTrainingwithPlants.csv

description: Hypothesis: It was hypothesised that the distance measured between adult trees would affect tree diameter because of space required for optimal growth. <br>Prediction 1: As distance between each adult tree decreases, diameter of each adult tree also decreases.<br>Prediction 2: As distance between adult trees increases, tree diameter simultaneously increases. <br>Prediction 3: Distance between adult trees has no affect on tree diameter.<br>Methods: Data was collected in the York University woodlot during the afternoon with sunny conditions. In order to assess the patterns between tree distance and tree diameter, 10 pairs of adult trees were used in which the variables included distance between each tree, diameter of each tree and the conditions in which they were in (living, dead, huge green canopy). Tree size was determined by ensuring that the standard to which tree sample would count as an adult tree was greater than 5 cm. Distance between 10 pairs of trees were measured using transect measuring tapes in centimetres. Observations were recorded. Ensured that the measurements between trees were done with only adult trees larger than 5 cm. Measurements were done with tape pressed flat on the ground facing up to the nearest flat point of the next adult tree. The diameter of each adult tree was recorded using a tape measure in centimetres. The tape measure was held up in front of the tree horizontally recording from the far left end of the tree to the far right end to ensure that the width was correctly measured. the condition of the adult tree was placed on a scale in which 0 meant the tree was dead, 1 meant that it was living and 2 meant that it resulted in a green canopy overhead to thus result in the absence of light or sky visibility. The conditions of the trees were measured by observing whether the tree appeared alive or dead. If it was observed as alive, it was further examined to ensure whether it formed a huge green canopy. <br><br>
DOI: 10.6084/m9.figshare.3840519.v2
title: lab2FieldTrainingwithPlants.csv

description: Hypothesis: It was hypothesised that the distance measured between adult trees would affect tree diameter because of space required for optimal growth. <br>Prediction 1: As distance between each adult tree decreases, diameter of each adult tree also decreases.<br>Prediction 2: As distance between adult trees increases, tree diameter simultaneously increases. <br>Prediction 3: Distance between adult trees has no affect on tree diameter.<br>Methods: Data was collected in the York University woodlot during the afternoon with sunny conditions. In order to assess the patterns between tree distance and tree diameter, 10 pairs of adult trees were used in which the variables included distance between each tree, diameter of each tree and the conditions in which they were in (living, dead, huge green canopy). Tree size was determined by ensuring that the standard to which tree sample would count as an adult tree was greater than 5 cm. Distance between 10 pairs of trees were measured using transect measuring tapes in centimetres. Observations were recorded. Ensured that the measurements between trees were done with only adult trees larger than 5 cm. Measurements were done with tape pressed flat on the ground facing up to the nearest flat point of the next adult tree. The diameter of each adult tree was recorded using a tape measure in centimetres. The tape measure was held up in front of the tree horizontally recording from the far left end of the tree to the far right end to ensure that the width was correctly measured. the condition of the adult tree was placed on a scale in which 0 meant the tree was dead, 1 meant that it was living and 2 meant that it resulted in a green canopy overhead to thus result in the absence of light or sky visibility. The conditions of the trees were measured by observing whether the tree appeared alive or dead. If it was observed as alive, it was further examined to ensure whether it formed a huge green canopy. <br><br>
DOI: 10.7910/dvn/v1rjpf/fvdbfu
title: mea20150321_03.txt.gz

description: :unav