cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4225/55/5a76e3ed7b2cd
title: Excalibur WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of Excalibur (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5a76e3b493498
title: Gladius WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of Gladius (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5a76e3729bbb8
title: H-45 WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of H-45 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5a76e3467f026
title: Kukri WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of Kukri (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5a76e32aeea40
title: Pastor WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of Pastor (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5a76e303b0df1
title: RAC-875 WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of RAC-875 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5a76e2d8db65a
title: Volcani-DD-1 WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of Volcani-DD-1 (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5a76e2b1ac93b
title: Westonia WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of Westonia (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5a76e293ee0fc
title: Wyalkatchem WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of Wyalkatchem (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5a76e1a1b5dda
title: Yitpi WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of Yitpi (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5aa085b5c4991
title: Supplementary Materials | Chapter 4

description: This file set includes the <b>supplementary materials for the chapter 4</b> of the thesis submitted in fulfillment of the requirement for the degree of<br>Doctor of Philosophy by Shanika L. Amarasinghe. <br>Generated data files are large to be included into the thesis. Therefore, we decided to upload them to FigShare and share the link within the thesis. The relevant section within the chapter 4 includes the descriptions of the supplementary materials in this file set.
DOI: 10.4225/55/5aa11470444b0
title: Supplementary Materials | Chapter 3

description: This file set includes the supplementary materials for the chapter 3 of the thesis submitted in fulfillment of the requirement for the degree ofDoctor of Philosophy by Shanika L. Amarasinghe.<br>Generated data files are large to be included into the thesis. Therefore, we decided to upload them to FigShare and share the link within the thesis. The relevant section within the chapter 3 includes the descriptions of the supplementary materials in this file set.
DOI: 10.4225/55/5aa116ab810bd
title: Supplementary Materials | Chapter 5

description: This file set includes the supplementary materials for the chapter 5 of the thesis submitted in fulfillment of the requirement for the degree ofDoctor of Philosophy by Shanika L. Amarasinghe.<br>Generated data files are large to be included into the thesis. Therefore, we decided to upload them to FigShare and share the link within the thesis. The relevant section within the chapter 5 includes the descriptions of the supplementary materials in this file set.
DOI: 10.15468/dl.rcyzqd
title: Occurrence Download

description: A dataset containing 539969 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-122.55291 47.32236,-122.34769 47.32236,-122.34769 47.51934,-122.55291 47.51934,-122.55291 47.32236))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 539969 records from 177 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054247-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cq9yea
title: Occurrence Download

description: A dataset containing 779 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vulpes zerda"
 ]
}

 The dataset includes 779 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054254-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4225/55/5ac6d287d59d1
title: High accuracy at low frequency: detailed behavioural classification from accelerometer data

description: Tri-axial accelerometer data from captive dingoes<br>
DOI: 10.4225/55/5b0605866669e
title: Data and code from: Characterising the shape patterns of dimorphic yeast pseudoyphae

description: Code and data for the paper Characterising the shape patterns of dimorphic yeast pseudoyphae. The driving scripts are in the directory OTT_indices. The processed datasets used by these scripts are in the directory DataSets. The scripts make use of functions in the Directory General-mfiles.
DOI: 10.4225/55/5b0ca9b2cd6dc
title: Genomes-Used-For-Simulated-Metagenomes

description: Genomes-Used-For-Simulated-Metagenomes
DOI: 10.4225/55/5b0caf73b7247
title: Simulated_Metagenomes

description: Simulated_Metagenomes generated using Gargammel.<br>
DOI: 10.25909/5b44a2cd609c7
title: Chinese Spring WGS vs IWGSC RefSeq v1.0 Genome Assembly

description: WGS reads of Chinese Spring (ENA: PRJNA392179) were aligned against the IWGSC <i>Triticum aestivum</i> Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q&gt;=30) homozygous; Het = high quality (Q&gt;=30) heterozygous; LowQualHom = low quality (Q&lt;30) homozygous; LowQualHet = low quality (Q&lt;30) heterozygous. Files are provided separately for each chromosome part.
DOI: 10.4225/55/5b3ae3f80fa4a
title: Data Ghanipoor-Samami and Javadmanesh et al. for PLoS ONE 2018.xlsx

description: Real time qPCR data<br><br><br>
DOI: 10.25909/5b3c1f6da17f8
title: Processed images from: TAMMiCol: Tool for analysis of the morphology of microbial colonies

description: Images processed by TAMMiCol used in TAMMiCol: Tool for analysis of the morphology of microbial colonies. The images are taken over time and show yeast colonies exhibiting filamentous growth.
DOI: 10.25909/5b581a5a151da
title: Data from: remnant woodland biodiversity gains under ten years of revealed-price incentive payments

description: Data were collected following the methodology outlined in Croft, S., Pedler, J. & Milne, T. (2005) Bushland Condition Monitoring Manual Southern Mt Lofty Ranges. Nature Conservation Society of South Australia.<br>Further details regarding response variables and study design can be found in <br>Bond AJ, O'Connor PJ and Cavagnaro TR (in press) Remnant woodland biodiversity gains from 10 years of revealed-price incentive payments. Journal of Applied Ecology.<br>Please contact Anthelia Bond anthelia.bond@gmail.com with any questions.<br>
DOI: 10.5281/zenodo.17947220
title: SEM Withered Plant (BSE Series) — Kikoh Matsuura (Art–Science Archive)

description: Parent (series) record for *SEM Withered Plant (BSE)* by Kikoh Matsuura.  This record serves as the hub for all child datasets in the series.

**Files included:**- A series overview (TXT) documenting scope, naming rules, citation style, and file policy- A machine-readable index (CSV) that will be updated to list child datasets (DOIs, imaging parameters, etc.)

Each child dataset contains raw, uncompressed BMP images (≈10 per set, number varies) acquired with a personally owned TECHNEX TinySEM M3-i using the BSE detector under high-vacuum conditions.  Child records provide detailed READMEs with exact parameters (accelerating voltage, working distance, vacuum, pixel size, field of view, frame time, coating).

This parent provides a stable concept DOI for the entire *SEM Withered Plant (BSE)* series.  Child datasets link back via *IsPartOf*, and this parent enumerates them via *HasPart*.  

*This series visualizes the hidden order and chance in withered plants through SEM-BSE, leaving a unique trace at the boundary between art and science.*
DOI: 10.25909/5b5e5ce43b658
title: Data associated with Cope et al. 2018 'Characterising seasonal influenza epidemiology using primary care surveillance data'

description: This file contains the necessary data, and computational code, associated with the manuscript:<br>Robert C. Cope, Joshua V. Ross, Monique Chilver, Nigel P. Stocks and Lewis Mitchell. (2018) Characterising seasonal influenza epidemiology using primary care surveillance data. PLoS Computational Biology.<br>Please see the manuscript for details.
DOI: 10.25909/5e658faec9638
title: Qualitative transcripts

description: Transcripts of study 2 qualitative investigation: interviews
DOI: 10.25909/5e659030268e1
title: Qualitative survey scans and associated files

description: This is the pdf of the scanned documents from the survey which asked men to look at 4 types of health promotion messages.
DOI: 10.25909/5b7d0772de74f
title: Matlab code for determining instantaneous heart rate from audio signals of nesting birds

description: Matlab source code of signal processing methods to determine the instantaneous heart-rate from an audio recording made with a bird sitting on a plastic egg fitted with a wired microphone. These files are to accompany the conference paper:<br><br>Carl Q. Howard, Jarrod C. Hodgson, and Lian Pin Koh (2018), "Heart rate measurement of nesting birds using a microphone in a plastic egg", Australian Acoustical Society Annual Conference 2018, Adelaide, South Australia, Australia, 6-9 November.<br>
DOI: 10.25909/5b84c9c196f54
title: List of assembly accessions for simulated MALT analyses

description: Genome assemblies used to construct the MALT indices used for the simulated analyses (MALTn-genome, MALTn-CDS, and MALTx)<br>
DOI: 10.25909/5b84d19aaff2a
title: HOMD accessions

description: List of accessions in the HOMD database (July 2017).<br>
DOI: 10.25909/5be402b3cf09a
title: RefSeqGCS accessions

description: Accessions used to build the RefSeqGCS MALT database.<br>
DOI: 10.25909/5b84ddf58ac49
title: RefSeqGCS genome accessions

description: List of genomic accessions used to construct the RefSeqGCS MALT database.<br>
DOI: 10.25909/5b850c0617071
title: Post fire litters are richer in water soluble carbon and lead to increased microbial activity

description: In this study, litters collected from two vegetation types (<i>Pinus</i> and <i>Eucalyptus</i> dominated) and from adjacent areas either fire affected (FA) or not fire affected (NFA) were incubated as litter, or as water extracts of litter, in soils to determine fire induced changes in nutrient pools, microbial biomass and microbial activity.
DOI: 10.25909/5bb5669bab0d8
title: Diolcogaster ITS2 supplementary information.xlsx

description: Erinn Fagan-Jeffries PhD thesis supplementary information, Chapter 2, S2 - Tables of specimen sequence information for Diolcogaster ITS2
DOI: 10.25909/5bce60019238c
title: Mitochondrial genome consensus sequences from Elasmotherium sibiricum samples

description: Mitochondrial genome consensus sequences from six Elasmotherium sibiricum specimens.<br>Annotated versions of four of these sequences (ACAD15710, ACAD15711, ACAD15712, and ACAD15714) are also available on GenBank (accession: MH937513-MH937516).<br>
DOI: 10.25909/5bce600ab13dc
title: Elasmotherium R1 and R2 sequencing reads (demultiplexed)

description: R1 and R2 reads for <i>Elasmotherium sibiricum</i> samples from Illumina NextSeq, demultiplexed by internal barcode sequences. NB: residual adapter sequences have not been removed.<br>
DOI: 10.25909/5bce6013766cd
title: Elasmotherium collapsed (merged) R1 and R2 sequencing reads

description: Collapsed (merged) R1 and R2 reads for <i>Elasmotherium sibiricum</i> samples from Illumina NextSeq. Residual adapter sequences have been removed (using AdapterRemoval).<br>
DOI: 10.25909/5bce601b23589
title: Elasmotherium PartitionFinder input and results

description: Input and results files from PartitionFinder analyses.<br>
DOI: 10.25909/5bce60233d6d1
title: Elasmotherium RAxML input and results

description: Input and results files from RAxML analyses.<br>
DOI: 10.25909/5bce6041df7e9
title: Elasmotherium BEAST input and results

description: Input and results files from BEAST analyses.<br>
DOI: 10.25909/5c1ade89814b0
title: Phototactic tails manuscript ESM-Files

description: Electronic supporting information for paper:<b><br></b><b>Phototactic tails: Evolution and molecular basis of a novel sensory trait in sea snakes</b><br>Authors: Jenna M. Crowe-Riddell, Bruno F. Simões, Julian C. Partridge, David M. Hunt, Steven Delean, Julian G. Schwerdt, James Breen, Alastair Ludington, David J. Gower, Kate L. Sanders<br>Files:<b>ESM File 1: </b>RAXML-gene-trees.zip containing maximum likelihood gene trees in .fasta and .nex format shows relationship among putative phototaxis sea snake transcripts and phototaxis genes from representative vertebrate lineages. <b>ESM File 2: </b>TranscriptomeAssemblies-PhototacticTails-skin-heart-liver-eye-testis.zip containing transcriptomes for sea snake tissues assembled using Trinity pipeline. Note: Embargo on <i>A. laevis</i> Eye Assembly. <b>ESM File 3:</b> FPKMheatmap.zip containing R script for generating MDS plot & FPKM heatmap, TPM matrix for each sea snake transcriptome created using Salmon<b>ESM File 4:</b> Tail-injuries.xlsx containing raw data of tail damage in museum specimens of sea snakes.<b>ESM File 5: </b>Beh-exp.xlsx containing raw and summary data for beahvioural experiments of 17 individuals from eight species of sea snake.<b>ESM File 6. </b>Video1.mov containing examples of tail phototaxis in sea snakes<br><b>ESM File 7. </b>Video2.mov containing examples of body phototaxis in sea snakes.<b>ESM File 8. </b>RNA-sequencing raw reads<br><b></b> <b></b>
DOI: 10.25909/5bd1187de8fe7
title: Simulated-Metagenome.xlsx

description: List of microbial genomes used to construct the simulated metagenome used in an upcoming study. Simulated metagenomes were constructed using gargammel:<br>#empirical ancient DNA distribution:<br>./gargammel.pl --comp 1,0,0 -n 1500000 --loc 4 --scale 0.3 -briggs 0.03,0.25,0.01,0.5 MEGAN-MALT-benchmark-plus-Ecoli/ -o Euk-DB-Contam/<br><br>#100bp fragments:<br>./gargammel.pl --comp 1,0,0 -n 1500000 --l 100 -briggs 0.03,0.25,0.01,0.5 MEGAN-MALT-benchmark-plus-Ecoli/ -o Euk-DB-Contam/100bp<br>
DOI: 10.25909/5bd542c52b409
title: EPILEPSY IN THE LUNATIC ASYLUMS OF SOUTH AUSTRALIA (1852 – 1913)

description: The information in the attached spreadsheet was obtained from the nineteenth and early twentieth century archives of the two South Australian Lunatic Asylums (Adelaide and Parkside). The archives are held by the State Records of South Australia. (see https://archives.sa.gov.au/content/our-catalogue). The original books were searched for information about people affected by epilepsy. These records were photographed and the information extracted into an Excel spreadsheet. The spreadsheet includes a data dictionary explaining each of the fields. The information was used as source material for a Master’s thesis "EPILEPSY IN THE LUNATIC ASYLUMS OF SOUTH AUSTRALIA (1852 – 1913)". Ethics approval to use the information appropriately was obtained from the University of Adelaide HREC (H-2016-069). For privacy purposes the patients’ surnames are not listed in the spreadsheet.