cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17253881.v2
title: Supplementary file- data sheets

description: Bilateral motor training is a useful method for modifying corticospinal excitability. The effects of artificial bilateral movement on corticospinal excitability through transcranial magnetic stimulation have not been reported. We compared motor-evoked potentials (MEPs) of primary motor cortex (M1) following conventional bilateral motor training and artificial bilateral movements generated through electromyogram activity of the abductor pollicis brevis (APB) muscle triggered peripheral nerve stimulation and TMS. Three sessions with different interventions were conducted involving healthy participants: bilateral finger training , right APB-triggered TMS of the ipsilateral M1 , and right APB-triggered contralateral median nerve stimulation . Each protocol consisted of 360 trials for 30 min each. Resting Motor Threshold showed no significant changes and MEP amplitude significantly increased up to 40 min post-intervention in all protocols. Short interval intracortical inhibition and intracortical facilitation changed and there were differences based on the intervention. . Thus, repetitive bilateral movements enhance corticospinal excitability, both voluntarily and artificially.
DOI: 10.6084/m9.figshare.17253881.v1
title: Supplementary file- data sheets

description: Bilateral motor training is a useful method for modifying corticospinal excitability. The effects of artificial bilateral movement on corticospinal excitability through transcranial magnetic stimulation have not been reported. We compared motor-evoked potentials (MEPs) of primary motor cortex (M1) following conventional bilateral motor training and artificial bilateral movements generated through electromyogram activity of the abductor pollicis brevis (APB) muscle triggered peripheral nerve stimulation and TMS. Three sessions with different interventions were conducted involving healthy participants: bilateral finger training , right APB-triggered TMS of the ipsilateral M1 , and right APB-triggered contralateral median nerve stimulation . Each protocol consisted of 360 trials for 30 min each. Resting Motor Threshold showed no significant changes and MEP amplitude significantly increased up to 40 min post-intervention in all protocols. Short interval intracortical inhibition and intracortical facilitation changed and there were differences based on the intervention. . Thus, repetitive bilateral movements enhance corticospinal excitability, both voluntarily and artificially.
DOI: 10.34740/kaggle/dsv/2942004
title: Omicron daily cases by country (COVID-19 variant)
DOI: 10.6084/m9.figshare.17280473
title: Task instruction

description: Task instruction
DOI: 10.6084/m9.figshare.17280473.v1
title: Task instruction

description: Task instruction
DOI: 10.6084/m9.figshare.17279651
title: Gossypium herbaceum (A1) cultivar genome

description: The reference-grade cotton genome assembly and annotation of <i>Gossypium herbaceum</i> (A<sub>1</sub>) cultivar using Oxford Nanopore sequencing technology.
DOI: 10.6084/m9.figshare.17279990
title: Gossypium herbaceum (A1a) wild genome

description: The reference-grade cotton genome assembly and annotation of Gossypium herbaceum (A1a) wild using Oxford Nanopore sequencing technology.
DOI: 10.5281/zenodo.5232770
title: Morphometric data from: Incongruent molecular and morphological variation in the crab spider Synema globosum (Araneae: Thomisidae) in Europe

description: Here we provide the complete set of files used by Urfer et al. (2021, see References section below for the complete citation of the publication) for the morphometric and the molecular analysis. In particular, we provide the following documents: <br> PART 1: MORPHOMETRIC ANALYSIS - 1_Synema_data_multiple_imputation_mice.R: R-script used for replacing NAs. - 1_Synema_data_NA_imputed.csv: Dataset with raw values (in millimeters) of all 28 specimens used for the morphometric analysis. Each specimen was measured 4 times. NAs replaced using the R-script "Synema_multiple_imputation_mice.R" above. This is the datafile used for all morphometric analyses. - 1_Synema_data_with_NA.csv: Dataset with raw values (in millimeters) of all 28 specimens. Each specimen was measured 4 times. NAs not replaced.<br> <br> - 1_Synema_Reliability.R: R-script for calculating reliability.<br> <br> - 1_Synema_Reliability_supplementary_figure.pdf: Results of reliability analysis presented in a bar plot. - 1_Synema_Reliability_supplementary_table.txt: Results of reliability analysis presented in a table.<br> <br> - 1_Synema_Shape_PCA_and_PCA_Ratio_Spectrum.R: R-script for calculating the shape PCA and the PCA Ratio Spectrum of the first shape PC. You may get the necessary MRA source script from http://doi.org/10.5281/zenodo.4250142<br> <br> - Synema_globosum_AR9379_PV.jpg, Synema_globosum_AR9379_PV.jpg, Synema_globosum_AR9379_PV.jpg, etc.: Photographs taken with a LEICA M205 C stere-omicroscope. 1. Numbers after AR_ refer to the inventory number of the specimens in the Natural History Musuem Bern (NMBE). The specimen number was also used in the data file.<br> 2. The photo named "Synema_globosum_AR9163_with_measurements" shows the position of the measurements. Otherwise, the measurements are not indicated in the raw photos. <br> Example image Character name Definition<br> Synema_globosum_AR9163_with_measurements cym.l Cymbium lenght Distance of the anterior margin to the tip of the cymbium<br> Synema_globosum_AR9163_with_measurements cym.b Cymbium breadth widest breadth of the cymbium<br> Synema_globosum_AR9163_with_measurements bul.b Bulb breadth widest breadth of the genital bulbus<br> Synema_globosum_AR9163_with_measurements tib.b Tibia breadth breadth of the tibia base at the patella joint
description: {"references": ["Urfer K, Spasojevic T, Klopfstein S, Baur H, Lasut L, Kropf C (2021-12-17) Incongruent molecular and morphological variation in the crab spider Synema globosum (Araneae, Thomisidae) in Europe. ZooKeys 1078: 107\u2013134. https://doi.org/10.3897/zookeys.1078.64116"]}
DOI: 10.5281/zenodo.5232769
title: Morphometric data from: Incongruent molecular and morphological variation in the crab spider Synema globosum (Araneae: Thomisidae) in Europe

description: Here we provide the complete set of files used by Urfer et al. (2021, see References section below for the complete citation of the publication) for the morphometric and the molecular analysis. In particular, we provide the following documents: <br> PART 1: MORPHOMETRIC ANALYSIS - 1_Synema_data_multiple_imputation_mice.R: R-script used for replacing NAs. - 1_Synema_data_NA_imputed.csv: Dataset with raw values (in millimeters) of all 28 specimens used for the morphometric analysis. Each specimen was measured 4 times. NAs replaced using the R-script "Synema_multiple_imputation_mice.R" above. This is the datafile used for all morphometric analyses. - 1_Synema_data_with_NA.csv: Dataset with raw values (in millimeters) of all 28 specimens. Each specimen was measured 4 times. NAs not replaced.<br> <br> - 1_Synema_Reliability.R: R-script for calculating reliability.<br> <br> - 1_Synema_Reliability_supplementary_figure.pdf: Results of reliability analysis presented in a bar plot. - 1_Synema_Reliability_supplementary_table.txt: Results of reliability analysis presented in a table.<br> <br> - 1_Synema_Shape_PCA_and_PCA_Ratio_Spectrum.R: R-script for calculating the shape PCA and the PCA Ratio Spectrum of the first shape PC. You may get the necessary MRA source script from http://doi.org/10.5281/zenodo.4250142<br> <br> - Synema_globosum_AR9379_PV.jpg, Synema_globosum_AR9379_PV.jpg, Synema_globosum_AR9379_PV.jpg, etc.: Photographs taken with a LEICA M205 C stere-omicroscope. 1. Numbers after AR_ refer to the inventory number of the specimens in the Natural History Musuem Bern (NMBE). The specimen number was also used in the data file.<br> 2. The photo named "Synema_globosum_AR9163_with_measurements" shows the position of the measurements. Otherwise, the measurements are not indicated in the raw photos. <br> Example image Character name Definition<br> Synema_globosum_AR9163_with_measurements cym.l Cymbium lenght Distance of the anterior margin to the tip of the cymbium<br> Synema_globosum_AR9163_with_measurements cym.b Cymbium breadth widest breadth of the cymbium<br> Synema_globosum_AR9163_with_measurements bul.b Bulb breadth widest breadth of the genital bulbus<br> Synema_globosum_AR9163_with_measurements tib.b Tibia breadth breadth of the tibia base at the patella joint
description: {"references": ["Urfer K, Spasojevic T, Klopfstein S, Baur H, Lasut L, Kropf C (2021-12-17) Incongruent molecular and morphological variation in the crab spider Synema globosum (Araneae, Thomisidae) in Europe. ZooKeys 1078: 107\u2013134. https://doi.org/10.3897/zookeys.1078.64116"]}
DOI: 10.5281/zenodo.5791047
title: The effect of four premolar extractions on the vertical dimension of the face: a retrospective cephalometric study

description: Dataset for all analyses.
DOI: 10.5517/ccdc.csd.cc28jsh3
title: CCDC 2101505: Experimental Crystal Structure Determination

description: Related Article: Lily Southcott, Lily Li, Brian O. Patrick, Holger Stephan, María de Guadalupe Jaraquemada-Peláez, Chris Orvig|2021|Inorg.Chem.|60|18082|doi:10.1021/acs.inorgchem.1c02709
DOI: 10.34740/kaggle/dsv/2942210
title: Cryptocurrency extra data - Ethereum Classic
DOI: 10.6084/m9.figshare.17280227
title: Gossypium bickii (G1) genome

description: The reference-grade cotton genome assembly and annotation of Gossypium bickii (G1) using Oxford Nanopore sequencing technology.
DOI: 10.6084/m9.figshare.17280200
title: Gossypium longicalyx (F1) genome

description: The reference-grade cotton genome assembly and annotation of Gossypium longicalyx (F1) using Oxford Nanopore sequencing technology.
DOI: 10.6084/m9.figshare.17280119
title: Gossypium sturtianum (C1) genome

description: The reference-grade cotton genome assembly and annotation of Gossypium sturtianum (C1) using Oxford Nanopore sequencing technology.
DOI: 10.6084/m9.figshare.17280074
title: Gossypium anomalum (B1) genome

description: The reference-grade cotton genome assembly and annotation of Gossypium anomalum (B1) using Oxford Nanopore sequencing technology.
DOI: 10.25430/researchdata.cab.unipd.it.00000569
title: 2020 Dataset on local gambling regulations in Italy

description: The dataset provides the complete enumeration of gambling policies implemented by Italian Municipalities between 2003 and 2021. The dataset comprises information on all municipalities existing in 2017 and following years (thus considering also merging). The following variables are available: Municipality ISTAT Code (ID), Municipality Name (Name) Province, Region, Researcher, and a series of variables identifying the number and the type of rulings adopted (“regolamento”, “ordinanza” and “delibera”). The rulings are distinguished between identified and downloaded or only identified (because the document is no longer available). Additional variables describe municipal activism with other administrative acts (Anti-gambling Manifesto, events, projects or tax reductions). Overall, the dataset comprises 8031 units.
DOI: 10.21415/t5wp4j
title: CHILDES Norwegian Ringstad Corpus
DOI: 10.5281/zenodo.5703506
title: Dataset and code for "A parameterization of non-hydrostatic pressure transport terms in second- and third-order turbulence equations"

description: Description of included files: <strong>Cloud Layers Unified By Binormals (CLUBB) content</strong> The zipped up "clubb_release.tar.gz" folder contains the CLUBB code base used to generate the simulations used in this paper. The ifort compiler was used to produce the simulations used in the paper. The zipped up "clubb_files.tar.gz" folder contains BOMEX, DYCOMS2_RF01, and Wangara 1D simulations for "default" runs (without new pressure transport terms) and "new" runs (with new pressure transport terms). Setup files are also included which give the parameter and flag values for each run. The files contained in clubb_files.tar.gz are: bomex_setup_dflt.txt bomex_zt_dflt.nc bomex_zm_dflt.nc bomex_sfc_dflt.nc dycoms2_rf01_setup_dflt.txt dycoms2_rf01_zt_dflt.nc dycoms2_rf01_zm_dflt.nc dycoms2_rf01_sfc_dflt.nc wangara_setup_dflt.txt wangara_zt_dflt.nc wangara_zm_dflt.nc wangara_sfc_dflt.nc bomex_setup_new.txt bomex_zt_new.nc bomex_zm_new.nc bomex_sfc_new.nc dycoms2_rf01_setup_new.txt dycoms2_rf01_zt_new.nc dycoms2_rf01_zm_new.nc dycoms2_rf01_sfc_new.nc wangara_setup_new.txt wangara_zt_new.nc wangara_zm_new.nc wangara_sfc_new.nc The CLUBB code base used for this paper can also be obtained by cloning the repo at https://github.com/larson-group/clubb_release.git. The relevant git branch is "stephens_2022_press_trans_paper" and the relevant git commit hash is 937db014df79318655b4fb6a469a7b77529b2e74. Compiled with ifort, the stephens_2022_press_trans_paper branch will generate the "new" simulations without further modifications. To generate the "dflt" simulations, set C_wp2_pr_dfsn = C_wp3_pr_dfsn = 0 in input/tunable_parameters/tunable_parameters.in, and set l_use_tke_in_wp2_wp3_K_dfsn = .false. in input/tunable_parameters/configurable_model_flags.in. <strong>System for Atmospheric Modeling (SAM) content</strong> SAM LES files with horizontal average variables: BOMEX_64x64x75_100m_40m_1s.nc DYCOMS_RF01_96x96x320.nc WANGARA_64x64x80_100m_40m_LES.nc The SAM code base used for this paper can be obtained by cloning the repo at https://github.com/larson-group/sam_clubb.git. The relevant git commit hash is db3e00a09cb5c0503e1bf3a728603fe690cb9a3e. The gfortran compiler was used to generate the runs used in the paper. <strong>Python script</strong> The included python script "stephens_2022_press_trans_paper_figures.py" can be used along with the SAM and CLUBB files to generate the plots shown in the paper, with some simple user modifications. This script can also be found in the stephens_2022_press_trans_paper branch of the clubb_release repo, in the "postprocessing" folder.
DOI: 10.5281/zenodo.5703505
title: Dataset and code for "A parameterization of non-hydrostatic pressure transport terms in second- and third-order turbulence equations"

description: Description of included files: <strong>Cloud Layers Unified By Binormals (CLUBB) content</strong> The zipped up "clubb_release.tar.gz" folder contains the CLUBB code base used to generate the simulations used in this paper. The ifort compiler was used to produce the simulations used in the paper. The zipped up "clubb_files.tar.gz" folder contains BOMEX, DYCOMS2_RF01, and Wangara 1D simulations for "default" runs (without new pressure transport terms) and "new" runs (with new pressure transport terms). Setup files are also included which give the parameter and flag values for each run. The files contained in clubb_files.tar.gz are: bomex_setup_dflt.txt bomex_zt_dflt.nc bomex_zm_dflt.nc bomex_sfc_dflt.nc dycoms2_rf01_setup_dflt.txt dycoms2_rf01_zt_dflt.nc dycoms2_rf01_zm_dflt.nc dycoms2_rf01_sfc_dflt.nc wangara_setup_dflt.txt wangara_zt_dflt.nc wangara_zm_dflt.nc wangara_sfc_dflt.nc bomex_setup_new.txt bomex_zt_new.nc bomex_zm_new.nc bomex_sfc_new.nc dycoms2_rf01_setup_new.txt dycoms2_rf01_zt_new.nc dycoms2_rf01_zm_new.nc dycoms2_rf01_sfc_new.nc wangara_setup_new.txt wangara_zt_new.nc wangara_zm_new.nc wangara_sfc_new.nc The CLUBB code base used for this paper can also be obtained by cloning the repo at https://github.com/larson-group/clubb_release.git. The relevant git branch is "stephens_2022_press_trans_paper" and the relevant git commit hash is 937db014df79318655b4fb6a469a7b77529b2e74. Compiled with ifort, the stephens_2022_press_trans_paper branch will generate the "new" simulations without further modifications. To generate the "dflt" simulations, set C_wp2_pr_dfsn = C_wp3_pr_dfsn = 0 in input/tunable_parameters/tunable_parameters.in, and set l_use_tke_in_wp2_wp3_K_dfsn = .false. in input/tunable_parameters/configurable_model_flags.in. <strong>System for Atmospheric Modeling (SAM) content</strong> SAM LES files with horizontal average variables: BOMEX_64x64x75_100m_40m_1s.nc DYCOMS_RF01_96x96x320.nc WANGARA_64x64x80_100m_40m_LES.nc The SAM code base used for this paper can be obtained by cloning the repo at https://github.com/larson-group/sam_clubb.git. The relevant git commit hash is db3e00a09cb5c0503e1bf3a728603fe690cb9a3e. The gfortran compiler was used to generate the runs used in the paper. <strong>Python script</strong> The included python script "stephens_2022_press_trans_paper_figures.py" can be used along with the SAM and CLUBB files to generate the plots shown in the paper, with some simple user modifications. This script can also be found in the stephens_2022_press_trans_paper branch of the clubb_release repo, in the "postprocessing" folder.
DOI: 10.5281/zenodo.2542957
title: Dataset associated with paper "Baroclinic control of Southern Ocean eddy upwelling near topography" (GRL2021)

description: This dataset contains results from idealized 2-layer simulations investigating eddy-driven isopycnal cross-jet transport near topography due to an ACC-type jet impinging on an isolated piece of topography. It includes variables such as Eddy Energy, EKE, eddy-driven cross-jet transport, and energy conversions terms due to Reynolds and eddy form stresses, for several topography cases. It also includes the ipython notebooks to generate the figures included in the corresponding paper entitled "Baroclinic control of Southern Ocean eddy upwelling near topography" submitted to GRL.
DOI: 10.5281/zenodo.2542956
title: Dataset associated with paper "Baroclinic control of Southern Ocean eddy upwelling near topography" (GRL2021)

description: This dataset contains results from idealized 2-layer simulations investigating eddy-driven isopycnal cross-jet transport near topography due to an ACC-type jet impinging on an isolated piece of topography. It includes variables such as Eddy Energy, EKE, eddy-driven cross-jet transport, and energy conversions terms due to Reynolds and eddy form stresses, for several topography cases. It also includes the ipython notebooks to generate the figures included in the corresponding paper entitled "Baroclinic control of Southern Ocean eddy upwelling near topography" submitted to GRL.
DOI: 10.5517/ccdc.csd.cc28tfzj
title: CCDC 2109828: Experimental Crystal Structure Determination

description: Related Article: Sujitra Tunsrichon, Sujittra Youngme, Jaursup Boonmak|2021|Inorg.Chem.|60|18242|doi:10.1021/acs.inorgchem.1c02875
DOI: 10.5517/ccdc.csd.cc28tg0l
title: CCDC 2109829: Experimental Crystal Structure Determination

description: Related Article: Sujitra Tunsrichon, Sujittra Youngme, Jaursup Boonmak|2021|Inorg.Chem.|60|18242|doi:10.1021/acs.inorgchem.1c02875
DOI: 10.34740/kaggle/dsv/2942382
title: Cryptocurrency extra data - Ethereum
DOI: 10.6084/m9.figshare.17269337.v6
title: Tabla resumen - artículos incluidos.docx

description: Tabla resumen - artículos incluidos
DOI: 10.25919/z88p-6c82
title: Parkes observations for project P1124 semester 2021OCTS_02

description: The progenitors of Fast Radio Bursts (FRBs) have been highly debated in past decade. The discovery of a bright radio burst from a Galactic magnetar, SGR 1935+2154, implies that some of faint FRBs can originate from normal magnetars. A recent short gamma-ray bursts (GRB 200415A) from a nearby galaxy turned out to be caused by magnetar giant flare. If a fraction of SGRBs and repeating FRBs share similar magnetars as progenitors, we could expect to detect fast radio transients from some suspicious magnetar-driven SGRBs. Here we propose to observe two sources with possible magnetar progenitors, in particular, a total observing time of 32 hours is requested. If detections made, we would confirm the association of progenitors of both FRBs and SGRBs and directly uncover the origin of extragalactic FRBs for at least one population.
DOI: 10.5281/zenodo.5791100
title: Porricondyla nigripennis SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5791099
title: Porricondyla nigripennis SPAdes preassembly

description: .
DOI: 10.6084/m9.figshare.14482547
title: The diagnostic and prognostic role of neutrophil-to-lymphocyte ratio in COVID-19: a systematic review and meta-analysis

description: <b>Background:</b> The world urgently requires surrogate markers to diagnose COVID-19 and predict its progression. The severity is not easily predicted via currently used biomarkers. Critical COVID‐19 patients need to be screened for hyperinflammation to improve mortality but expensive cytokine measurement is not routinely conducted in most laboratories. The neutrophil-to-lymphocyte ratio (NLR) is a novel biomarker in patients with various diseases. We evaluated the diagnostic and prognostic accuracy of the NLR in COVID-19 patients. <b>Methods:</b> We searched for relevant articles in seven databases. The quantitative analysis was conducted if at least two studies were evaluating the NLR role in COVID-19. <b>Results:</b> We included 8,120 individuals, including 7,482 COVID-19 patients, from 32 articles. Patients with COVID-19 had significantly higher levels of NLR compared to negative individuals. Advanced COVID-19 stages had significantly higher levels of NLR than earlier stages. <b>Expert Opinion:</b> We found significantly higher levels of NLR in advanced stages compared to earlier stages of COVID-19 with good accuracy to diagnose and predict the disease outcome, especially mortality prediction. A close evaluation of critical SARS-CoV-2 patients and efficient early management are essential measures to decrease mortality. NLR could help in assessing the resource allocation in severe COVID-19 patients even in restricted settings.
DOI: 10.6084/m9.figshare.14482547.v1
title: The diagnostic and prognostic role of neutrophil-to-lymphocyte ratio in COVID-19: a systematic review and meta-analysis

description: <b>Background:</b> The world urgently requires surrogate markers to diagnose COVID-19 and predict its progression. The severity is not easily predicted via currently used biomarkers. Critical COVID‐19 patients need to be screened for hyperinflammation to improve mortality but expensive cytokine measurement is not routinely conducted in most laboratories. The neutrophil-to-lymphocyte ratio (NLR) is a novel biomarker in patients with various diseases. We evaluated the diagnostic and prognostic accuracy of the NLR in COVID-19 patients. <b>Methods:</b> We searched for relevant articles in seven databases. The quantitative analysis was conducted if at least two studies were evaluating the NLR role in COVID-19. <b>Results:</b> We included 8,120 individuals, including 7,482 COVID-19 patients, from 32 articles. Patients with COVID-19 had significantly higher levels of NLR compared to negative individuals. Advanced COVID-19 stages had significantly higher levels of NLR than earlier stages. <b>Expert Opinion:</b> We found significantly higher levels of NLR in advanced stages compared to earlier stages of COVID-19 with good accuracy to diagnose and predict the disease outcome, especially mortality prediction. A close evaluation of critical SARS-CoV-2 patients and efficient early management are essential measures to decrease mortality. NLR could help in assessing the resource allocation in severe COVID-19 patients even in restricted settings.
DOI: 10.34740/kaggle/dsv/2942555
title: Cryptocurrency extra data - Litecoin