cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.ff10n/3
title: Rate of evolution

description: R script for the analysis of the rate of evolution of body size and egg size
DOI: 10.5061/dryad.ff10n/4
title: Reproductive rate

description: R script for the analysis of reproductive rates
DOI: 10.5061/dryad.ff10n/5
title: Reproductive rate data

description: Reproductive rates (in number of eggs per month) used in the analysis
DOI: 10.5061/dryad.fg700/1
title: Supplementary Tables
DOI: 10.5061/dryad.fg700/2
title: Supplementary_File_Legends
DOI: 10.5061/dryad.fg700/3
title: Supp_File_1_Ericson1914
DOI: 10.5061/dryad.fg700/4
title: Supp_File_2_Hackett1914
DOI: 10.5061/dryad.fn2cp/1
title: per.wounds.data

description: Data of health parameters and perineal wounds in South American fur seal pups
DOI: 10.5061/dryad.h3s98/1
title: Close-up of flowers of Gastrodia putaoensis
DOI: 10.5061/dryad.h3s98/2
title: View of lip_Column_Tepals

description: View of lip, column and tepals
DOI: 10.5061/dryad.h3s98/3
title: Plant of Gastrodia putaoensis-overview-1
DOI: 10.5061/dryad.j1692/1
title: Physical properties of Cu-BTC and Antifungal activity results of CuBTC againt Yeast

description: Physical properties of Cu-BTC and Antifungal activity results of CuBTC againt Yeast
DOI: 10.5061/dryad.j1692/2
title: Antifungal activity results of CuBTC againt Fungi
DOI: 10.5061/dryad.j35k0/1
title: MA_fitness_data

description: The data are from an assay measuring fitness as competitive reproductive success where flies from a mutation accumulation line competed against flies bearing a recessive orange-eye mutation. Fitness was quantitated using the number of red-eyed and orange-eyed offspring that emerged from each assay.
DOI: 10.5061/dryad.j35k0/2
title: MA_simulation_output

description: The data are from a simulation that replicated the conditions of the mutation accumulation experiment and allowed us to determine which factor(s) could have produced the empirical results.
DOI: 10.5061/dryad.j35k0/3
title: simulation_code_for_publication

description: R code that simulated mutation accumulation with and without sexual selection and allowed us to vary the proportion of sex-limited mutations, the relative strength of sex-limited mutations, and the between-sex correlation for a mutation's effect.
DOI: 10.5061/dryad.k0gq6/70
title: E_nr_catana_19.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/71
title: E_nr_catana_146.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/72
title: E_nr_goodmani_445.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/73
title: E_nr_goodmani_446.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/74
title: E_nr_necula_478.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/75
title: E_nr_numida_384.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/76
title: E_nr_olivacea_28.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/77
title: E_nr_pallidicosta_287.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/78
title: E_nr_pallidicosta_288.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/79
title: E_nr_viridiflava_31.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.kt8m4/1
title: DATA REPOSITORY-IL33 paper
DOI: 10.5061/dryad.m2h2v/1
title: The concentration of 15 elements in fine roots and the data of community structure survey

description: The data file contains two datasets. 1. The concentration of 15 elements (C, N, K, Ca, Mg, S, Al, P, Fe, Mn, Na, Zn, Cu, Ni, and Co) in the fine roots of 281 plant species at eight forest sites crossing five forest types along the North–South transect in eastern China. 2. Community structure survey of the tree, shrub, and herb communities at eight forest sites. Vegetation parameters include species number, plant height, diameter at breast height (DBH) for all trees with DBH ≥ 2 cm or basal stem diameter for shrubs, and aboveground live biomass of each herbaceous species.
DOI: 10.5061/dryad.nn1rk/1
title: Dryad_Datasheet

description: Contains the data corresponding to each primary and one supplemental figure in different tabs.
DOI: 10.5061/dryad.pc4d6/1
title: Weir_fig_1c

description: Microscopy source images for Figure 1C. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/10
title: Weir_2017_Dryad_README

description: README with descriptive information and instructions for use of this dataset. Also contains links to GitHub repositories containing Python and R analysis code.
DOI: 10.5061/dryad.pc4d6/2
title: Weir_fig_2c_4d

description: Microscopy source images for Figures 2C and 4D. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/3
title: Weir_fig_3c_4f

description: Microscopy source images for Figures 3C and 4F. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/4
title: Weir_fig_3e

description: Microscopy source images for Figure 3E. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/5
title: Weir_fig_6c

description: Microscopy source images for Figure 6C. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/6
title: Weir_fig_5c

description: Microscopy source images for Figure 5C. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.12751/g-node.97bc14
title: Spiking activity of neurons in macaque dorsal visual cortex during a fixation and saccade task.

description: The data includes spike times (1 ms resolution) for single neurons recorded extracellularly in macaque areas LIP (74), VIP (107), and MT/MST (95). Fixation targets (red LEDs, diameter: 0.5°, luminance: 0.4 cd/m2) were back projected onto a translucent screen (size: 60° × 60°). All experiments were performed in the dark (luminance &lt; 0.01 cd/m2). To prevent dark adaptation, room lights were briefly switched on prior to a new set of trials for at least a couple of seconds.
 At the beginning of each trial, the monkey maintained gaze (within 1° of error) on a target at one of five positions ([0,0],[-10,10],[-10,-10],[10,-10],[10,10]). After 1000ms, the target stepped 10° either rightward or downward. The animal performed a saccade to the new position within 500ms and maintained fixation for another 1000ms. All trial types were interleaved in a pseudorandom order.
 Eye position was tracked using binocular scleral search coils and digitized offline at a sampling rate of 1000Hz. Saccade onset (offset) was defined as the first time point at which eye velocity reached more (less) than 30% of the peak velocity observed within 80-600ms after the onset of the target (stepping forward and backward in time from the peak).
description: Data from publication: Morris AP, Bremmer F and Krekelberg B (2016) The Dorsal Visual System Predicts Future and Remembers Past Eye Position. Front. Syst. Neurosci. 10:9. doi: 10.3389/fnsys.2016.00009
DOI: 10.17632/jmvr5pvt9b.1
title: Data for: How does neighbourhood tree species composition affect growth characteristics of oak saplings?

description: Measurements on oak saplings planted within young tree stands with different tree species composition. The experiment was done in two of the three FORBIO sites in Belgium. Infection severity of oak powdery mildew was noted, as well as the level of shading the saplings received and various woody biomass and leaf traits.
DOI: 10.17632/jmvr5pvt9b.2
title: Data for: How does neighbourhood tree species composition affect growth characteristics of oak saplings?

description: Measurements on oak saplings planted within young tree stands with different tree species composition. The experiment was done in two of the three FORBIO sites in Belgium. Infection severity of oak powdery mildew was noted, as well as the level of shading the saplings received and various woody biomass and leaf traits.
DOI: 10.5061/dryad.0k24s/1
title: Bleaching_Data

description: Hormone and reproduction data
DOI: 10.5061/dryad.0v346/1
title: aboveground and belowground data

description: Plotwise ramet counts and belowground root densities of 13 species in 18 plots. Readme file is a part of the archive.
DOI: 10.5061/dryad.125g5/2
title: Zc Tag-Sonar Field Descriptions

description: Descriptions of fields contained in the associated text files, including their use in each model.
DOI: 10.5061/dryad.1j79t/1
title: data_set_supp
DOI: 10.5061/dryad.26sb5/1
title: African_pyrodiversity

description: The zip archive contains 22 .tif files with pyrodiversity values for sub-Saharan Africa at 5-minute grain increments from 15 to 120 minutes.
DOI: 10.5061/dryad.2j3c8/1
title: Alignments

description: Alignments of the mitochondrial and nuclear genes (or gene fragments) sequenced to obtain the phylogeny of the subgenus Lumetus (genus Enochrus, family Hydrophilidae, order Coleoptera) in FASTA format
DOI: 10.5061/dryad.2r8v4/1
title: C:N:P stoichiometry in China’s forests: from organs to ecosystems
DOI: 10.5061/dryad.2sd19/3
title: MusselTracker data repository and analysis

description: Updated R analysis file (MusselTracker_workup.Rnw) and accompanying data files for the MusselTracker project. See the README.md file for information on the files contained with. Example output from the .Rnw analysis file is provided (in .tex and .pdf formats).
DOI: 10.5061/dryad.3j8rr/1
title: Souchay-et-al_oik.04247_rawdata

description: raw field data of breeding success and migration schedule of surveyed European hoopoes with geolocator. See article and Appendix 2 for a complete description of the data file
DOI: 10.5061/dryad.46m4b/1
title: ChromoSSE

description: Scripts and data needed to run ChromoSSE analyses.
DOI: 10.5061/dryad.480tf/1
title: Adults.conservancy

description: Three year sight-resight data of adults within the Conservancy setting
DOI: 10.5061/dryad.480tf/2
title: Adults.outlying

description: Three years sight-resight data of adults in the rangeland setting
DOI: 10.5061/dryad.480tf/3
title: Adults.sanctaury

description: Three years sight-resight data of adults in the sanctuary setting
DOI: 10.5061/dryad.480tf/4
title: SubAdults.conservancy

description: Three years sight-resight data of subadults in the conservancy setting
DOI: 10.5061/dryad.480tf/6
title: SubAdults.sanctuary

description: Three years sight-resight data of subadults in the sanctuary setting
DOI: 10.5061/dryad.55jq5/1
title: bmjopen-2017-015952R2data
DOI: 10.5061/dryad.5n92p/1
title: COI ZOTUs

description: Quality-trimmed, adapter-trimmed, dereplicated, chimera-filtered and denoised sequences amplified from odonate faecal DNA COI region.
DOI: 10.5061/dryad.64g86/6
title: BTx623 and NSZ Chilling Tolerance Score

description: Field evaluation of BTx623 and NSZ for seedling chilling tolerance in Ashland Bottoms, KS during 2016.
DOI: 10.5061/dryad.6bg67/1
title: Pollen carried by nectar bats

description: This file contains data about species and number of pollen grains carried by flower-visiting bat species in southern Thailand. DATE: date that bat was caught and pollen collected; LOCATION: the park at which the bat was caught (KBT- Khao Banthat Wildlife Sanctuary, KPKY- Khao Pu Khao Ya National Park, TB- Thale Ban National Park, TNC- Ton Nga Chang Wildlife Sanctuary); TIME: time that the bat was caught and pollen collected; ID2: unique identifier given to each bat; DIET: whether the bat is strictly nectarivorous ("nectar") or also consumes fruit ("fruit"); GENUS: genus of the bat individual; SPECIES: species of the bat individual; SEX: sex of the bat individual; REPRO: reproductive status of the bat individual; MASS: mass of the bat (g); FA: forearm length of the bat (cm); aCeiba: number of Ceiba pentandra pollen grains collected from the bat; aDurio: number of Durio zibethinus pollen grains collected from the bat; aMusa: number of Musa acuminata pollen grains collected from the bat; aOroxylum: number of Oroxylum indicum pollen grains collected from the bat; aParkia: number of Parkia pollen grains collected from the bat; aSonneratia: number of Sonneratia pollen grains collected from the bat;
DOI: 10.5061/dryad.6bg67/2
title: Flowering phenology of bat-pollinated plants in Thailand

description: This file contains phenological data of common bat-pollinated plant species in southern Thailand. DATE: date the data was collected; PARK: location where the data was collected (KBT- Khao Banthat Wildlife Sanctuary, KPKY- Khao Pu Khao Ya National Park, TB- Thale Ban National Park, TNC- Ton Nga Chang Wildlife Sanctuary); SPECIES: plant species (C.pentandra- Ceiba pentandra, D.zibethinus- Durio zibethinus, M.acuminata- Musa acuminata, O.indicum- Oroxylum indicum, P.speciosa- Parkia speciosa, P.timoriana- Parkia timoriana, S.alba- Sonneratia alba, S.caseolaris- Sonneratia caseolaris, S.griffithi- Sonneratia griffithi, S.ovata- Sonneratia ovata); FL: number of trees with flowers, out of 10 randomly selected trees; FR: number of trees with fruits, out of the 10 randomly selected trees; B: number of trees with both fruits and flowers, out of the 10 randomly selected trees; N: number of trees with neither fruits nor flowers, out of the 10 randomly selected trees.
DOI: 10.5061/dryad.6nd96/1
title: Individual level defence data

description: Individual level values of foliar silicon concentration (% dry mass), tensile strength (N mm-1) and phenolic concentration (% DM) for 21 cereal species. Domestication status ("Status" column) is indicated as W (wild ancestor), L (landrace) or C (modern cultivar)
DOI: 10.5061/dryad.6nd96/2
title: Growth rate data

description: Plant mass data from destructive harvests for 21 cereal species over 30 days. Domestication status ("Status" column) is indicated by W (wild ancestor), L (landrace) or C (modern cultivar). All units are given in column names.
DOI: 10.5061/dryad.812bb/1
title: Biodata and genotypes for VA/WV coyotes

description: Excel file containing biodata and microsatellite genotypes for coyotes collected from Virginia and West Virginia. Note that missing genotypes are coded with 0. A spreadsheet with locus information is provided.
DOI: 10.5061/dryad.8hm07/1
title: soil datasets-paperI-kilntype_enrichment
DOI: 10.5061/dryad.8hm07/2
title: datasets-AGB roduction-kilntype-enrichment
DOI: 10.5061/dryad.8k56k/3
title: Smiley_DiversityMetrics_Analysis_RScript

description: R Script to calculate diversification rates and impose preservation scenarios
DOI: 10.5061/dryad.bb702/1
title: Raw data and Custom R scripts for genome wide recombination analysis of mlh3 separation of function mutants
DOI: 10.5061/dryad.bb702/2
title: Raw groupEvents and ReCombine data and Custom R scripts for genome wide recombination analysis of mlh3 separation of function mutants
DOI: 10.5061/dryad.dv2q6/1
title: Lembrechts2017_Ecography_Data

description: Datasets (Plot GDD, species establishment and species biomass) associated with the experiment described in Lembrechts et al. (2017) Microclimate variability in alpine ecosystems as stepping stones for non-native plant establishment above their current elevational limit.
Ecography 40: 001–009. doi: 10.1111/ecog.03263
DOI: 10.5061/dryad.fd0qm/1
title: Threats Associated with the Decline of Monarch Butterfly

description: Data are population size estimates for monarch butterflies overwintering in Mexico as well as 76 potential stressors and 3 correlates. These stressors include disease, pesticide, herbicide, temperature, precipitation, and habitat loss measured for Mexican overwintering area and Southern, North Central, and Northeastern breeding areas. Data were collected to understand the broad array of potential stressors affecting monarch butterfly population dynamics.
DOI: 10.5061/dryad.fg700/12
title: Supp_File_10_appendix1914
DOI: 10.5061/dryad.fg700/5
title: Supp_File_3_Ericson1824
DOI: 10.5061/dryad.fg700/6
title: Supp_File_4_Hackett1824
DOI: 10.5061/dryad.fg700/7
title: Supp_File_5_data_and_references
DOI: 10.5061/dryad.fg700/8
title: Supp_File_6_Geiger_Caper_script
DOI: 10.5061/dryad.fg700/9
title: Supp_File_7_HiSSE_script
DOI: 10.5061/dryad.g14k2/1
title: Epp PCR replicate 1 - PE2

description: Compressed raw sequence output file. Contains the following data: Epp primer set, 1st PCR replicate, reverse read.
DOI: 10.5061/dryad.g14k2/2
title: Epp PCR replicate 3 - PE2

description: Compressed raw sequence output file. Contains the following data: Epp primer set, 3rd PCR replicate, reverse read.
DOI: 10.5061/dryad.g14k2/3
title: Epp PCR replicate 3 - PE1

description: Compressed raw sequence output file. Contains the following data: Epp primer set, 3rd PCR replicate, forward read.
DOI: 10.5061/dryad.g14k2/4
title: Epp PCR replicate 1 - PE1

description: Compressed raw sequence output file. Contains the following data: Epp primer set, 1st PCR replicate, forward read.
DOI: 10.5061/dryad.h8fr1/1
title: PAB-OR-2016-0049 data and Supplementary Information
DOI: 10.5061/dryad.k0gq6/80
title: E_numida_381.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/81
title: E_nympha_603.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/82
title: E_nympha_612.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/83
title: E_obada_436.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/84
title: E_occia_439.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/85
title: E_occia_440.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/86
title: E_olivacea_648.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/87
title: E_paraviolascens_8.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.k0gq6/88
title: E_paraviolascens_21.fastq

description: Individual fastq file from the genotyping by sequencing dataset.
DOI: 10.5061/dryad.n82g9/1
title: Z1 (Fell field-Bare ground-Plot 1)
DOI: 10.5061/dryad.n82g9/2
title: Z2 (Fell field-Salix-Plot 1)
DOI: 10.5061/dryad.p6030/1
title: CercusVertexCoordinates

description: This folder contains the x,y,z coordinates for points (vertices of a triangular mesh) covering 3-D digitized cerci obtained from CT scans.  There is one file for each specimen.  Files formatted as Matlab files for morphometric analysis using Spherical Harmonics but files can be read in a text editor.
DOI: 10.5061/dryad.p6030/2
title: LandmarkCoordinates_males

description: This file contains the x,y,z coordinates for 7 common points on each male cercus, to accompany the data in the folder "CercusVertices" for Spherical Harmonic analysis.
DOI: 10.5061/dryad.pc4d6/11
title: Weir_fig_7b

description: Microscopy source images for Figure 7B. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/12
title: Weir_fig_7c

description: Microscopy source images for Figure 7C. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/13
title: Weir_fig_7e

description: Microscopy source images for Figure 7E. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/14
title: Weir_fig_s6g_s6h

description: Microscopy source images for Figure 6-Figure Supplement 1G and 1H. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/16
title: Weir_fig_s6j_pex12

description: Microscopy source images for Figure 6-Figure Supplement 1J (Pex12 portion). See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/7
title: Weir_fig_6e

description: Microscopy source images for Figure 6E. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/8
title: Weir_fig_s1a_s1c

description: Microscopy source images for Figure 1-Figure Supplement 1A and 1C. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.pc4d6/9
title: Weir_fig_s6a

description: Microscopy source images for Figure 6-Figure Supplement 1A. See Weir_2017_Dryad_README.md for additional information.
DOI: 10.5061/dryad.rv982/1
title: CTmin/max and acclimation original dataset

description: This data file contains the CTMax/Min, mass, length, bmi, acclimation days, and temperature treatments used for the data analysis.
DOI: 10.5061/dryad.rv982/2
title: Monthly temperature from meteorological station, worldclim, and projected climates

description: This dataset contains the monthly temperature (mean, max, min) used for the estimation of local temperature (worldclim, projected climate with Representative Concentration Pathways, meteorological station). The meteorological station data was used to estimate the microclimatic variation.
DOI: 10.5061/dryad.vg4d4/1
title: scripts_and_data_TE_paper

description: These are all the protcolos used and results produced for the paper "Regulation of transposable elements: interplay between TE-encoded regulatory sequences and host-specific trans-acting factors in Drosophila melanogaster" by Ana Marija Jaksic, Robert Kofler and Christian Schlötterer.
I did not include some intermediate files (for example intermediate fasta files or pileups) due to space reasons but they can be generated with the provided code. In file "hello.txt" you will find a shortcut to most important data and scripts. AM :)
DOI: 10.5061/dryad.vr165/1
title: Expert data for ranks, mode comparison, and interval comparison

description: Multiple sheets in the workbook show data for expert responses ranking and quantifying impacts (with uncertainty) on ecosystem services. On ranking sheets, each row corresponds to ranking of different experts. On mode comparison, "absolute diff" indicates the difference of each expert's estimate of impact compared to the mean value. On interval comparison, "range" indicates the interval range for each expert's uncertainty in the impact score.
DOI: 10.17632/jnfx65zp49.1
title: Data for: Which tooth to sample? A methodological study of the utility of premolar/non-carnassial teeth in the microwear analysis of mammals

description: Raw data of microwear features of Artiodactyla (S1) and Carnivora (S2) included in this study.
DOI: 10.5061/dryad.3c827/1
title: Spectral and Temporal Measurements of Male and Female Dark-eyed Junco Songs from San Diego, California

description: Measurements collected in Raven Pro 1.4 (Cornell Lab of Ornithology) from field recordings of 22 male and 3 female Dark-eyed Juncos. Some male subjects were recorded multiple times and sang different song types, which explains the repeated samples for certain individuals. Peak frequency was collected from spectrograms, and should be interpreted as the frequency with the highest amplitude in the song. Trill rate was calculated as the number of syllables (elements) divided by the song length.
DOI: 10.5061/dryad.46m4b.2
title: Data from: Cladogenetic and anagenetic models of chromosome number evolution: a Bayesian model averaging approach
DOI: 10.5061/dryad.46m4b.2/1.2
title: ChromoSSE

description: Scripts and data needed to run ChromoSSE analyses.
DOI: 10.5061/dryad.480tf/10
title: Elasticity rates_all  settings2_elas2

description: This file contains data on hirola vital rates that we used for the Life table response experiment. The data include survival rates of different age classes, fecundity estimates, elasticity and sensitivity values.
DOI: 10.5061/dryad.480tf/5
title: SubAdults.outlying

description: Three years sight-resight data of subadults in the rangeland setting
DOI: 10.5061/dryad.480tf/7
title: Calves.conservancy

description: Three years sight-resight data of calves in the conservancy setting
DOI: 10.5061/dryad.480tf/8
title: Calves.outlying

description: Three years sight-resight data of calves in the rangeland setting