cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/v019r-yta78
title: Wild type w/ iron

description: Raw data files of Wild type w/ iron
description: <strong>Tilt Series Date:</strong> 2009-10-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach, IMOD</p>
<strong>Collaborators and Roles:</strong> Cells provided by Arash Komeili, Data collected by ZL</p>
<strong>Purification / Growth Conditions / Treatment:</strong> (Probably) Stationary phase</p>
<strong>Sample Preparation:</strong> Quantifoil R2/1 or R2/2, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-6/rawdata/</p>09oct21a_AMB1_006.mrc,  Tilt Series (Pixel Size 1.192 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-6/rawdata/09oct21a_AMB1_006.mrc"
        > <i class="download icon"></i> Download </a></p>

        09oct21a_AMB1_006_part.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-6/3dimage_9910/09oct21a_AMB1_006_part.rec"
        > <i class="download icon"></i> Download </a></p>

        09oct21a_AMB1_006.tif,  807.3 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-6/file_2796/09oct21a_AMB1_006.tif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/103q2-x4484
title: MEFs Chan Lab WT mitochondria

description: MEFs from Chan lab with normal mitochondria.
description: <strong>Tilt Series Date:</strong> 2011-12-14</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Murine embryonic fibroblast (MEFs)</p>
<strong>Strain:</strong> Primary cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> David Chan provided cells- contact Oliver Loson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> control cells for fission mutant</p>
<strong>Sample Preparation:</strong> manual blot</p>
  11dec14_MEFsB_BATCH2_0012_ns_full.jpg: file associated to 3D Image #54416
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-14-4/rawdata/</p>11dec14_MEFsB_BATCH2_0012_ns.st,  Tilt Series (Pixel Size 0.5 nm), 619.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-14-4/rawdata/11dec14_MEFsB_BATCH2_0012_ns.st"
        > <i class="download icon"></i> Download </a></p>

        11dec14_MEFsB_BATCH2_0012_ns_full.rec,  Reconstruction (Pixel Size 2.0 nm), 891.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-14-4/3dimage_54416/11dec14_MEFsB_BATCH2_0012_ns_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11dec14_MEFsB_BATCH2_0012_ns_full.tiff,  file associated to 3D Image #54416, 1.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-12-14-4/file_13147/11dec14_MEFsB_BATCH2_0012_ns_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/t15a7-av947
title: t-ADL

description: Raw data files of t-ADL
description: <strong>Tilt Series Date:</strong> 2009-03-01</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Halohasta litchfieldiae</p>
<strong>Strain:</strong> tADL</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 50.0 eV/Å²,  defocus: 30.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR</p>
<strong>Collaborators and Roles:</strong> Cells provided by Mike Dyall-Smith; Data collected by Zhuo Li. </p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown on the grids.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-01-1/rawdata/</p>09mar01b_bx98_tADL_001.mrc,  Tilt Series (Pixel Size 0.95 nm), 687.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-01-1/rawdata/09mar01b_bx98_tADL_001.mrc"
        > <i class="download icon"></i> Download </a></p>

        09mar01b_bx98_tADL_001.mrc,  687.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-01-1/3dimage_4282/09mar01b_bx98_tADL_001.mrc"
        > <i class="download icon"></i> Download </a></p>

        09mar01b_bx98_tADL_001_full.rec,  Reconstruction (Pixel Size 1.9 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-01-1/3dimage_4283/09mar01b_bx98_tADL_001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.vc8y2t
title: Occurrence Download

description: A dataset containing 24469 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Ludwigia grandiflora"
 ]
}

 The dataset includes 24469 records from 458 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040661-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/c889a-4yz96
title: MP wt 27.5KX

description: Mycoplasma pneumonia wt mutant, attachment organelle in cell
description: <strong>Tilt Series Date:</strong> 2010-02-21</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-02-21-3/rawdata/</p>10feb21a_MP3a_003.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-02-21-3/rawdata/10feb21a_MP3a_003.mrc"
        > <i class="download icon"></i> Download </a></p>

        10feb21a_MP3a_003_full.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-02-21-3/3dimage_17113/10feb21a_MP3a_003_full.rec"
        > <i class="download icon"></i> Download </a></p>

        10feb21a_MP3a_003_SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-02-21-3/3dimage_55968/10feb21a_MP3a_003_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/28kk2-sxv97
title: MP III4 27.5KX

description: Mycoplasma pneumonia III4 mutant
description: <strong>Tilt Series Date:</strong> 2010-04-01</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-33/rawdata/</p>10apr01a_B718a_037.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-33/rawdata/10apr01a_B718a_037.mrc"
        > <i class="download icon"></i> Download </a></p>

        10apr01a_B718a_037_full.rec,  Reconstruction (Pixel Size 1.548 nm), 314.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-33/3dimage_16675/10apr01a_B718a_037_full.rec"
        > <i class="download icon"></i> Download </a></p>

        10apr01a_B718a_037_SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-33/3dimage_56041/10apr01a_B718a_037_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6tm0p-8ym32
title: MP III4 27.5KX

description: Mycoplasma pneumonia III4 mutant, bad alignment
description: <strong>Tilt Series Date:</strong> 2010-04-01</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-25/rawdata/</p>10apr01a_B718a_025.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-25/rawdata/10apr01a_B718a_025.mrc"
        > <i class="download icon"></i> Download </a></p>

        10apr01a_B718a_025_full.rec,  Reconstruction (Pixel Size 1.548 nm), 314.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-25/3dimage_16659/10apr01a_B718a_025_full.rec"
        > <i class="download icon"></i> Download </a></p>

        10apr01a_B718a_025_SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-04-01-25/3dimage_56035/10apr01a_B718a_025_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/9xxt3-07z22
title: MEFs-Chan Lab

description: MefB cell line from O. Loson in Chan Lab
description: <strong>Tilt Series Date:</strong> 2012-01-05</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Murine embryonic fibroblast (MEFs)</p>
<strong>Strain:</strong> Primary cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Mefs from Chan Lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-18/3dimage_68821/</p>12jan05_MEFsB_AT2BT1_0006_full.rec,  Reconstruction (Pixel Size 2.0 nm), 722.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-18/3dimage_68821/12jan05_MEFsB_AT2BT1_0006_full.rec"
        > <i class="download icon"></i> Download </a></p>

        12jan05_MEFsB_AT2BT1_0006.mrc,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-18/rawdata/12jan05_MEFsB_AT2BT1_0006.mrc"
        > <i class="download icon"></i> Download </a></p>

        12jan05_MEFsB_AT2BT1_0006_full.tiff,  file associated to 3D Image #68821, 1.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-18/file_16002/12jan05_MEFsB_AT2BT1_0006_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/q1bjf-0y273
title: B subtilis bMD204

description: mreB-40aa-sfGFP  sfGFP-11aa-mbl::spec  ΔponA::cat"dual-tagged" strain, where mreB is C-terminally tagged and includes a 40 aa linker, while mbl is N-terminally tagged and uses an 11 aa linker.
description: <strong>Tilt Series Date:</strong> 2013-11-15</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> bMD204</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Ethan Garner and Mike Dion</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-11-15-1/rawdata/</p>111510_bs2040001.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-11-15-1/rawdata/111510_bs2040001.mrc"
        > <i class="download icon"></i> Download </a></p>

        111510_bs2040001_part121_1.rec,  Reconstruction (Pixel Size 1.92 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-11-15-1/3dimage_35370/111510_bs2040001_part121_1.rec"
        > <i class="download icon"></i> Download </a></p>

        mst2013-11-15-1_slicer19260.png,  REZ .  -andrew, 591.5 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/mst2013-11-15-1_slicer19260.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/tx934-5jx41
title: Vibrio Yi-Wei style

description: Strain MKW1383 grown in conditions Yi-Wei uses for Bdellovibrio predation
description: <strong>Tilt Series Date:</strong> 2014-02-21</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown 24 hours in LB at 30C; diluted 150 µL into 2 mL Ca-HEPES buffer and grew at 30C for another 16 hours</p>
  aba2014-02-21-11_slicer3713.jpg: cytoplasmic chemoreceptor array
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-11/rawdata/</p>VibrioYiWeiStyle0011.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-11/rawdata/VibrioYiWeiStyle0011.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibrioYiWeiStyle0011.rec,  Reconstruction (Pixel Size 0.0 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-11/3dimage_46692/VibrioYiWeiStyle0011.rec"
        > <i class="download icon"></i> Download </a></p>

        VibrioYiWeiStyle0011SIRTrot.rec,  Reconstruction (Pixel Size 0.0 nm), 7.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-11/3dimage_46693/VibrioYiWeiStyle0011SIRTrot.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bz0yx-2bm82
title: Halorubrum litoreum

description: Halorubrum litoreum
description: <strong>Tilt Series Date:</strong> 2014-06-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Halorubrum litoreum</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  aba2014-06-17-19_slicer4017.jpg: Archaellum ? in H. litoreum
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-06-17-19/rawdata/</p>litoreum1atlascell0004.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-06-17-19/rawdata/litoreum1atlascell0004.mrc"
        > <i class="download icon"></i> Download </a></p>

        litoreum1atlascell0004_part121_11.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-06-17-19/3dimage_43689/litoreum1atlascell0004_part121_11.rec"
        > <i class="download icon"></i> Download </a></p>

        aba2014-06-17-19_slicer16422.png,  DNA flow lines .  visible nucleoid   REZ .  almost certainly a dead cell (DNA filaments outside the cell) .  -andrew, 797.4 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/aba2014-06-17-19_slicer16422.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/qdqyh-cak35
title: Agrobacterium tumefaciens

description: Agro VG3101
description: <strong>Tilt Series Date:</strong> 2013-10-31</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Elliot Meyerwitz</p>
<strong>Purification / Growth Conditions / Treatment:</strong> liquid LB+antibiotics</p>
<strong>Sample Preparation:</strong> Vitrobot blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-10-31-13/rawdata/</p>agro_VG31010009.mrc,  Tilt Series (Pixel Size 0.4 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-10-31-13/rawdata/agro_VG31010009.mrc"
        > <i class="download icon"></i> Download </a></p>

        agro_VG31010009_full.rec,  Reconstruction (Pixel Size 0.0 nm), 801.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-10-31-13/3dimage_49057/agro_VG31010009_full.rec"
        > <i class="download icon"></i> Download </a></p>

        VG31010009_full.rec,  Reconstruction (Pixel Size 0.0 nm), 463.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-10-31-13/3dimage_49058/VG31010009_full.rec"
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DOI: 10.22002/k0v0a-qg142
title: HeLa

description: Synchronized, looking for midbodies
description: <strong>Tilt Series Date:</strong> 2014-01-05</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> HeLa cells</p>
<strong>Strain:</strong> ATCC</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSF tomo</p>
<strong>Collaborators and Roles:</strong> With Doug Mckay and Katherine Ullman</p>
<strong>Sample Preparation:</strong> HeLa cells+ siRNA NUP 153+ Thymidine 2mM. 14 hour after release</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-05-19/rawdata/</p>30003.mrc,  Tilt Series (Pixel Size 0.6 nm), 861.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-05-19/rawdata/30003.mrc"
        > <i class="download icon"></i> Download </a></p>

        30003.rec,  Reconstruction (Pixel Size 2.4 nm), 310.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-05-19/3dimage_50388/30003.rec"
        > <i class="download icon"></i> Download </a></p>

        3000new3_full.rec,  Reconstruction (Pixel Size 0.0 nm), 63.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-01-05-19/3dimage_50546/3000new3_full.rec"
        > <i class="download icon"></i> Download </a></p>