cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28083179.v1
title: Macromitrium nelliampathyanum trnL-trnF matrices.zip

description: DNA data matrix of trnL-trnF region used in the paper "<i>Macromitrium nelliampathyanum </i>sp. nov. (Orthotrichaceae: Bryopsida), a new moss species from the Western Ghats of India" by M. S. Sajitha, C. N. Manju, Dietmar Quandt and Jesús Muñoz, sent for publication to Journal of Bryology.
DOI: 10.6084/m9.figshare.17102348.v1
title: Data for "Tree identity and diversity directly affect soil moisture and temperature but not soil carbon ten years after planting"

description: Data for "Tree identity and diversity directly affect soil moisture and temperature but not soil carbon ten years after planting" by Martin-Guay et al.
DOI: 10.6084/m9.figshare.22923584.v1
title: Supplementary Material for: Discontinuation of Renin-Angiotensin-Aldosterone System Inhibitors Secondary to Hyperkalemia Translates into higher Cardiorenal Outcomes

description: Introduction: Discontinuation of renin-angiotensin-aldosterone system inhibitor (RAASi) is common after hyperkalemia. We evaluated the risk of kidney and mortality outcomes associated with RAASi discontinuation among patients with chronic kidney disease (CKD) and hyperkalemia. Methods: We identified adult patients with CKD (eGFR &lt;60 mL/min/1.73 m2) who experienced new onset hyperkalemia (potassium ≥5.0 mEq/L) between 2016-2017 from Kaiser Permanente Southern California and followed them through 2019. We defined treatment discontinuation as having ≥90-day gap in refills of all RAASi within 3 months after hyperkalemia. We used multivariable Cox proportional hazards models to evaluate the association between RAASi discontinuation and the primary composite outcome of kidney (≥40% eGFR decline, dialysis, kidney transplant) or all-cause mortality. We evaluated cardiovascular events and recurrence of hyperkalemia as secondary outcomes. Results: Among 5,728 patients (mean age 76 years), 13.5% discontinued RAASi within 3 months after new -onset hyperkalemia. During the median 2 years of follow-up, 29.7% had the primary composite outcome (15.5% with ≥40% eGFR decline, 2.8% dialysis or kidney transplant, 18.4% all-cause mortality). Patients who discontinued RAASi had a higher all-cause mortality compared with those who continued RAASi (26.7% vs 17.1%), but had no differences in kidney outcomes, cardiovascular events, and recurrence of hyperkalemia. RAASi discontinuation was associated with a higher risk of kidney or all-cause mortality composite outcome [adjusted hazard ratio (aHR) 1.21, 95% CI 1.06, 1.37] mainly driven by all-cause mortality (aHR 1.34, 95% CI 1.14, 1.56). Discussion/Conclusion: RAASi discontinuation after hyperkalemia was associated with worsened mortality, which may underscore the benefits of continuing RAASi among patients with CKD.
DOI: 10.6084/m9.figshare.25681797.v1
title: Data for "Comparative analysis of early interactions observed in families with infants and toddlers with Down syndrome versus families with infants and toddlers with typical development"

description: Results from data collected in project Fondecyt 1221400 "Paving the way for autonomy: An interdisciplinary approach to the relationship between early interactions and adaptive behaviour in infants with Down Syndrome"The overall goal of the project is to analyze the relationship between Parent-Child Interaction (PCI) and the development of Adaptive Behaviors (AB) in babies with Down Syndrome (DS), aiming to develop a comprehensive theoretical model using a multilevel approach to support a complex social intervention program to strengthen those interactions and improve the quality of life of these families. The project was guided by the following research questions: are there patterns of PCI that boost or hinder the development of AB in babies with DS? Could a multi-level approach enhance our understanding of PCI in presence of a disability? Is a program of parental measurement to draw upon PCI to enhance the development of AB in this population effective?We proposed an experimental design based on an interdisciplinary approach with a longitudinal component (24 months) with two studies. The first study explored the relationship between PCI and AB comparing a group of dyads including children with DS and a group of dyads including children with TD (12 to 36 months old) from two methodological approaches combining direct (physiological markers) and indirect variables (behavior observation and third-person reports). The second study explored the effectiveness of a multilevel evidence-based program, adapted to sociocultural characteristics and supported by technology, aimed towards boosting parental competencies in the PCI components.
DOI: 10.6084/m9.figshare.27329847.v2
title: Dataset of "Economic Forces Determine the Implementation Effectiveness of China’s Farmland Protection Planning during the Past Decade (2010-2020)"

description: Land use data: In 2010 and 2020, collected from second and third national land resource surveys as well as land use change surveys conducted by the State Council. The prefecture-level farmland area data was obtained by the China Land Survey Results Sharing Application Service Platform (https://gtdc.mnr.gov.cn/Share#/), while prefectures that underwent major adjustments of administrative divisions between 2010 and 2020 or lacked planning data were excluded. Additionally, we calculated farmland area using the China Land Use/cover Dataset with 30m spatial resolution from the Resource and Environment Science and Data Center (RESDC) of the Chinese Academy of Sciences.Planning quotas: The prefecture-level farmland protection quotas and the reported farmland area at base period were collected from provincial land use master plans for 2006-2020. Socio-economic factors: All data were collected from the China Statistical Yearbook, the China Land and Resources Statistical Yearbook or provincial statistical yearbooks, with missing data obtained from the population census yearbooks or prefectural statistical bulletins.
DOI: 10.6084/m9.figshare.14124071.v1
title: Table S1. List of the differential metabolites. .docx

description: Supplemental Table S1 of LC-37
DOI: 10.6084/m9.figshare.23690073.v1
title: When local customs meet the market: an analysis of coffee value chain in Tebat Benawa customary community, Indonesia

description: Using Tebat Benawa customary community in Indonesia as a case study, this paper aims to understand how non-specialty Robusta coffee value chain operates at the farmer-trader level and see if and how customary setting influences the relationships between actors. We employed a mixed-methods research design combining qualitative and quantitative analyses of primary and secondary data collected through group discussions, interviews, and participant observations. The social network analysis results showed that customary settings represented by clan-based familial relationships influenced farmer-trader relations, but it was not dominating. Coffee prices seem to be the major driver of the farmer-trader relations in Tebat Benawa. We argue that the relatively early stage of customary community consolidation indicates a weak social capital that makes economic rationale dominate farmers’ business decisions. This study contributes to the limited literature on the contemporary smallholder value chain of non-specialty Robusta coffee.
DOI: 10.6084/m9.figshare.7931774.v1
title: gVCF_HG04182

description: 1000 Genomes gVCF mapped to hs37d5 for HG04182. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.6084/m9.figshare.13693246.v1
title: amplitud_campo_Hz_kret "Figure 1 data"

description: data of figure 1
DOI: 10.6084/m9.figshare.16645561.v1
title: Seurat_object_whole_NMR_Thymus_Lymphnode_sortedTHY_pt2

description: This item comprises<br>each 4 ADT- and RNA-libraries for thoracic thymus: two for 3 year-old Naked mole-rats (THY1, THY2), two for 11 year-old Naked mole-rats (THY3, THY4);<br>each 4 ADT- and RNA-libraries for cervical thymus: two for 3 year-old Naked mole-rats (TLN1, TLN2), two for 11 year-old Naked mole-rats (TLN3, TLN4);<br>each 2 ADT- and RNA-libraries for lymph nodes of two 3 year-old Naked mole-rats (BLN1, BLN2);<br>each 1 ADT- and RNA-library for sorted thoracic thymus of two pooled 3 year-old Naked mole-rats (CD34).<br>Part 2 of a split file 7-zip archive.
DOI: 10.6084/m9.figshare.16835785.v1
title: Supplementary Material for: The Gene Signature of Activated M-CSF-Primed Human Monocyte-Derived Macrophages Is IL-10-Dependent

description: During inflammatory responses, monocytes are recruited into inflamed tissues, where they become monocyte-derived macrophages and acquire pro-inflammatory and tissue-damaging effects in response to the surrounding environment. In fact, monocyte-derived macrophage subsets are major pathogenic cells in inflammatory pathologies. Strikingly, the transcriptome of pathogenic monocyte-derived macrophage subsets resembles the gene profile of macrophage colony-stimulating factor (M-CSF)-primed monocyte-derived human macrophages (M-MØ). As M-MØ display a characteristic cytokine profile after activation (IL10<sup>high</sup> TNF<sup>low</sup> IL23<sup>low</sup> IL6<sup>low</sup>), we sought to determine the transcriptional signature of M-MØ upon exposure to pathogenic stimuli. Activation of M-MØ led to the acquisition of a distinctive transcriptional profile characterized by the induction of a group of genes (Gene set 1) highly expressed by pathogenic monocyte-derived macrophages in COVID-19 and whose presence in tumor-associated macrophages (TAM) correlates with the expression of macrophage-specific markers (<i>CD163</i>, <i>SPI1</i>) and <i>IL10</i>. Indeed, Gene set 1 expression was primarily dependent on ERK/p38 and STAT3 activation, and transcriptional analysis and neutralization experiments revealed that IL-10 is not only required for the expression of a subset of genes within Gene set 1 but also significantly contributes to the idiosyncratic gene signature of activated M-MØ. Our results indicate that activation of M-CSF-dependent monocyte-derived macrophages induces a distinctive gene expression profile, which is partially dependent on IL-10, and identifies a gene set potentially helpful for macrophage-centered therapeutic strategies.
DOI: 10.6084/m9.figshare.28302731.v1
title: Supplementary Material for: Manual dilution of CRRT fluids in anuric patients with severe hyponatremia: a case report and systematic review

description: Introduction: When a patient with severe hyponatremia requires renal replacement therapy, a too rapid correction of sodium levels may occur. Manual dilution of the fluids during continuous renal replacement therapy (CRRT) is a method that can lead to a controlled correction of sodium. We present a case and add a systematic review to determine the feasibility of this method. 
Case presentation: A female was admitted to the Intensive Care Unit (ICU) with acute kidney failure due to anti-GBM antibody glomerulonephritis, anuria and an initial sodium level of 100 mmol/L. She received CRRT with manually diluted fluids for 6 days, in which sodium levels increased from 108 mmol/L to 130 mmol/L. A search in Medline, Web of Science and Google Scholar was added for the systematic review. The search yielded 49 cases, including the current report, of which 47 were anuric or oliguric, in which the fluids were diluted to a median of 8 mmol/L (interquartile range 5-11)[range 0-17] above the serum sodium, the median CRRT dose was 27 ml/kg/hr (22-30)[13-77.5]. This led to an increase in serum sodium of 0.2 mmol/L/hr (0.1-0.3)[0-0.7].
Conclusion: CRRT with manually diluted fluids in patients with severe hyponatremia and anuria can lead to a controlled increase serum sodium, while allowing sufficient RRT dose and fluid removal. Still, errors in dilution may occur and we recommend 4 hourly monitoring of serum sodium levels to timely detect an inadvertent increase in sodium.
DOI: 10.17632/pvjp5j5jvk
title: Data for: The linkage of nitrogen isotopic composition and depositional environment of black mudstones in the Upper Triassic Yanchang Formation, Ordos Basin, northern China

description: The bulk nitrogen content , total organic carbon (TOC) content, nitrogen isotopic composition and organic carbon isotopic composition of Chang 7 Member ,Yanchang Formation ,Triassic in Ordos Basin.
DOI: 10.6084/m9.figshare.12401564.v1
title: 16 violin players in a square lattice configuration

description: 16 coupled violin players situated in a square lattice configuration.*.aiff = raw sounds files of the experiment*. = raw data files of the parameters of the system during the experiment*.mat = analyzed data of one of the measurements showing the phase of each players<br>*.m = code file for analyzing the data and making the figure*.fig = the figure in the paper
DOI: 10.17632/448529vphz
title: Islamic microfinance institutions: survey data

description: This data presenting a two-year panel data set of Islamic microfinance institutions’ (MFIs) clients in Indonesia. Data obtained from 289 Indonesian Islamic MFIs clients contain the clients’ financing characteristics. Data from this study might be used for further study especially on measuring impact of financing or access to financing for the three client groups that received finance by the different financing mechanisms.
DOI: 10.17632/dbs88kndfm
title: Social Science Publications in Seven Indonesian University (2008-2018)

description: The presented bibliometric dataset relates to a research article entitled “University Reform and the development of social sciences in Indonesia” published by the International Journal of Educational Development [1]. The dataset is substantiated by informed peer reviews as a way to conduct a longitudinal analysis of the contents of social science publications stored in the Scopus database. These publications were produced by academics at the faculties of social and political sciences at the seven state-owned universities in Indonesia over ten years from the beginning of Indonesian university reform in 2008 until July 2018. The dataset is the only data on social sciences currently available in Indonesia. The data collection involved listing the names of academics from faculty websites and searching their publications in the Scopus database. The authors act as informed peer reviewers to identify the publications as mainstream and non mainstream, their themes, research collaboration, policy and academic contributions. The dataset informs the state of the art of social sciences not only at university level but also at national level. Informed peer reviews are needed to supplement bibliometric data to assess the quality of social scientific works.
DOI: 10.17870/bathspa.13089503.v1
title: Social Experiments: Research Questions and Timeline

description: <b>Social Experiments</b> brings together 2 projects, <b>Material Environments: Bad Shit & Knowledge is Power: 6 Towns</b>. Rooted in place and history, both projects research the capacity for material and socio-political transformation through live scientific experimentation, production and participation to suggest new ways of thinking.<br><br>This item contains Research Questions and a Timeline for <b>Social Experiments</b> by Keith Harrison.
DOI: 10.6084/m9.figshare.19416839.v1
title: Bio-physicochemical data of soil samples from dumpsites in a Nigerian Sunshine State

description: Non-existent landfill practices have made dumpsites in Nigerian states major anthropogenic sources. Accumulation of these pollutants in soil (an essential component of the environment) will lead to environmental degradation. This article provides a dataset that can be used to show the effect dumpsite location has on the bio-physiochemical properties of the soil. Four dumpsite locations, namely Igbatoro, Iju-Itaogbolu, Ijare, and the Federal University of Technology Akure, were considered in this study. Soil samples were taken at each dumpsite location from the topsoil (0-10 cm), 10-20 cm and 20-30 cm. A control sample (to determine the migration effect of pollutants from the dumpsite) was obtained at a distance 20 m away from the dumpsites. Microbial analysis and physicochemical tests were performed on the soil sample. The dataset shows the distribution of the tested properties in the dumpsite locations. The data will serve as a reference for future estimation of the dumpsite pollution index and risk assessment for possible dumpsite(s) rehabilitation into landfill(s) or perhaps closure.
DOI: 10.6084/m9.figshare.26878219.v1
title: GLOSARIO DE CODIGO DE COMERCIO

description: LEY DE COMERCIO
DOI: 10.6084/m9.figshare.6115487.v2
title: The Plenoptic Dataset

description: The dataset is captured using two different plenoptic cameras, namely Illum from Lytro (based on plenoptic 1.0 model) and R29 from Raytrix (based on plenoptic 2.0 model). The scenes selected for the dataset were captured under controlled conditions. The cameras were mounted onto a multi-camera rig that was mechanically controlled to move the cameras with millimeter precision. In this way, both cameras captured the scene from the same viewpoint.<br>If you use this dataset in your research, we kindly ask you to reference the following paper and URL link of this website:<br>Waqas Ahmad, Luca Palmieri, Reinhard Koch, Mårten Sjöström. "Matching light field datasets from plenoptic cameras 1.0 and 2.0." 3DTV-Conference: 3D at any scale and any perspective, 2018. IEEE, 2018.<br><br>
DOI: 10.15468/dl.w3gp99
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Omphaloscelis lunosa (Haworth, 1809)"
 ]
}

 The dataset includes 159 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009414-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25523734.v4
title: 2020 U.S. Congressional Elections Tweet Data

description: 2020 U.S. Congressional Elections Tweet Data
DOI: 10.17632/wtd9g64f2v
title: Solution of the Skyrme—Hartree—Fock equations in the Cartesian deformed harmonic oscillator basis II. The program HFODD

description: Abstract We describe the code HFODD which solves the nuclear Skyrme—Hartree—Fock problem by using the deformed Cartesian harmonic oscillator basis. The user has a possibility of choosing among various symmetries of the nuclear HF problem for rotating or nonrotating nuclei; they vary from the non-axial parity-invariant nuclear shapes, through those also breaking the intrinsic parity, towards the least-restrictive case corresponding to only one symmetry plane. The code provides a solution for a complete... Title of program: HFODD (v1.60r) Catalogue Id: ADFL_v1_0 Nature of problem The nuclear mean-field and an analysis of its symmetries in realistic cases are the main ingredients of a description of nuclear states. Within the Local Density Approximation, or for a zero-range velocity- dependent Skyrme interaction, the nuclear mean-field is local and velocity dependent. This allows an effective and fast solution of the self-consistent Hartree-Fock equations even for heavy nuclei and for different configurations, deformations, excitation energies, or angular momenta. Versions of this program held in the CPC repository in Mendeley Data ADFL_v1_0; HFODD (v1.60r); 10.1016/S0010-4655(97)00005-2 ADFL_v1_1; HFODD (v1.75r); 10.1016/S0010-4655(00)00121-1 ADFL_v2_0; HFODD (v2.08j); 10.1016/j.cpc.2004.02.003 ADFL_v2_1; HFODD; version. 2.08k; 10.1016/j.cpc.2005.01.014 ADFL_v2_2; HFODD (v2.40h); 10.1016/j.cpc.2009.08.009 ADFL_v3_0; hfodd (v2.49t); 10.1016/j.cpc.2011.08.013 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.6084/m9.figshare.19328642.v1
title: Supplementary Material for: Endocannabinoid System in Polycystic Kidney Disease

description: <b><i>Introduction:</i></b> Autosomal dominant polycystic kidney disease (ADPKD) is a commonly inherited disorder characterized by renal cyst formation. A major pathological feature of ADPKD is the development of interstitial inflammation. The endocannabinoid (EC) system is present in the kidney and has recently emerged as an important player in inflammation and the pathogenesis of progressive kidney disease. <b><i>Methods:</i></b> Data on ECs were collected using a validated mass spectrometry assay from a well-characterized cohort of 102 ADPKD patients (at baseline and after 2- and 4 years on standard vs. rigorous blood-pressure control) and compared to 100 healthy subjects. <b><i>Results:</i></b> Compared to healthy individuals, we found higher interleukins-6 and -1b as well as reduced plasma levels of anandamide (AEA), 2-arachidonoyl­glycerol (2-AG), and their congeners in ADPKD patients. Baseline AEA concentration negatively associated with the progression of ADPKD as expressed by the yearly percent change in height-corrected total kidney volume and positively with the yearly change in renal function (measured as estimated glomerular filtration rate, ΔeGFR). AEA analog palmitoylethanolamide (PEA) is also associated positively with the yearly change in eGFR. <b><i>Discussion and Conclusion:</i></b> The results of the present study suggest that ADPKD patients present with lower levels of ECs and that reestablishing the normality of the renal EC system via augmentation of AEA, PEA, and 2-AG levels, either through the increase of their synthesis or through a reduction of their degradation, could be beneficial and may present a promising therapeutic target in said patients.
DOI: 10.6084/m9.figshare.24064107.v1
title: Supplementary Material for: Consumption of Sugar-sweetened Soft Drinks and Risk of Gastrointestinal Cancer: A Systematic Review and Meta-analysis of Observational Studies

description: Introduction: Previous observational studies have reported inconsistent findings on the association between consumption of sugar-sweetened soft drinks (SSSDs) and the risk of gastrointestinal (GI) cancer. This study investigated the associations between SSSD consumption and the risk of GI cancer using a systematic review and meta-analysis. Methods: Observational epidemiological studies were searched from the PubMed and EMBASE databases until June 2021. We conducted a meta-analysis of all included studies and subgroup meta-analyses based on various factors. Results: In a meta-analysis of 27 studies with nine case-control studies and 18 cohort studies, the consumption of SSSDs was modestly associated with an increased risk of GI cancer (OR/RR: 1.08; 95% CI, 1.01-1.16), with a significant positive dose-response relationship. In the subgroup meta-analysis by study design, there was a significant positive association between the consumption of SSSDs and GI cancer in cohort studies (RR, 1.11; 95% CI, 1.03-1.20; n = 18), but not in case-control studies. In the subgroup meta-analysis by type of cancer, consumption of SSSDs was significantly associated with an increased risk of colorectal cancer (OR/RR: 1.13; 95% CI, 1.07-1.19). Conclusions: This meta-analysis suggests that SSSD consumption significantly increases the risk of GI cancer, specifically colorectal cancer.
DOI: 10.6084/m9.figshare.20220060.v1
title: SciSciNet_Link_Newsfeed

description: SciSciNet_Link_Newsfeed
DOI: 10.6084/m9.figshare.28764965.v1
title: Supporting database for the alarm pheromone paper

description: This is the supporting data for all experiments we did using Triatoma pallidipennis, to investigate its alarm pheromone
DOI: 10.6084/m9.figshare.4970816.v1
title: Experiment_1.mat

description: description is in the README file