cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5562386
title: The dEchorate dataset

description: ⚠️ <strong>THIS WORK IS CURRENTLY UNDER REVIEW</strong> ⚠️ This work presents a new dataset of measured multichannel Room Impulse Responses (RIRs) named <em><strong>dEchorate</strong></em>.<br> See the `README.md` file on the code repository on visit the dEchorate website for more information: Paper | Website | Code It includes annotations of early echo timings and 3D positions of microphones, real sources and image sources under different wall configurations in a cuboid room. These data provide a tool for bench-marking recent methods in echo-aware signal processing, such as <em>speech enhancement</em>, <em>room geometry estimation</em>, <em>RIR estimation</em>, <em>acoustic echo retrieval</em>, <em>microphone calibration,</em> <em>echo labeling</em> and <em>reflectors position estimation</em>. The dataset is provided with software utilities to easily access, manipulate and visualize the data as well as baseline methods for echo-related tasks. If you use the data in your research, please reference the paper (not just the Zenodo record) <pre><code>@article{di2021dechorate, title={dEchorate: a Calibrated Room Impulse Response Database for Echo-aware Signal Processing}, author={Di Carlo, Diego and Tandeitnik, Pinchas and Foy, C{\'e}dric and Deleforge, Antoine and Bertin, Nancy and Gannot, Sharon}, journal={arXiv preprint arXiv:2104.13168}, year={2021} } </code></pre>
DOI: 10.25345/c57c40
title: MassIVE MSV000088209 - Ngercheumicin Fractions Run 2
title: These are the concentrated fractions of the ngercheumicin isolates
DOI: 10.22024/unikent/01.01.401
title: Megophrys from Ky Quan San: Supplementary information
DOI: 10.5523/bris.13pu85dfaobij2rumzql5buyy2
title: Crystallography and QM/MM Simulations Identify Preferential Binding of Hydrolyzed Carbapenem and Penem Antibiotics to the L1 Metallo-beta-lactamase in the Imine Form
title: Crystallography and QM/MM Simulations Identify Preferential Binding of Hydrolyzed Carbapenem and Penem Antibiotics to the L1 Metallo-beta-lactamase in the Imine Form

description: MD trajectories, topologies, parameters and input files for the data presented in the paper Twidale et al. J Chem. Inf. Model. 2021.
DOI: 10.5281/zenodo.5562488
title: Supporting Data for Human Factors in Developing Automated Vehicles:A Requirements Engineering Perspective

description: This data set complements our manuscript in submission with the title: "Human Factors in Developing Automated Vehicles: A Requirements Engineering Perspective" We provide two files: a) the interview guide b) an overview that maps from themes to example quotes and codes derived from particular interview subjects
DOI: 10.5281/zenodo.5562487
title: Supporting Data for Human Factors in Developing Automated Vehicles:A Requirements Engineering Perspective

description: This data set complements our manuscript in submission with the title: "Human Factors in Developing Automated Vehicles: A Requirements Engineering Perspective" We provide two files: a) the interview guide b) an overview that maps from themes to example quotes and codes derived from particular interview subjects
DOI: 10.5281/zenodo.5561142
title: Data from: Additive effects of developmental acclimation and physiological syndromes on lifetime metabolic and water loss rates of a dry-skinned ectotherm

description: Data sets from the paper: "Additive effects of developmental acclimation and physiological syndromes on lifetime metabolic and water loss rates of a dry-skinned ectotherm" by Dezetter et al. in Functional Ecology.
DOI: 10.5281/zenodo.5561141
title: Data from: Additive effects of developmental acclimation and physiological syndromes on lifetime metabolic and water loss rates of a dry-skinned ectotherm

description: Data sets from the paper: "Additive effects of developmental acclimation and physiological syndromes on lifetime metabolic and water loss rates of a dry-skinned ectotherm" by Dezetter et al. in Functional Ecology.
DOI: 10.5281/zenodo.5562243
title: The Bomber's Baedeker. A Guide to the Economic Importance of German Towns and Cities

description: The Bomber's Baedeker The two-volume printed work “The Bomber's Baedeker. A Guide to the Economic Importance of German Towns and Cities” was produced during the Second World War by the British Foreign Office and the Ministry of Economic Warfare. It lists towns and cities of the German Reich with more than a thousand inhabitants and information on their war-related infrastructure, industrial and production facilities. Only four verified copies still exist worldwide and none of them have been accessible for scholarly digital use until now. “The Bomber's Baedeker” was re-discovered in 2019 in the library of the Leibniz Institute of European History (IEG), digitised in cooperation with the Mainz University Library and made accessible and processed by the Digital Historical Research | DH Lab and the Darmstadt University of Applied Sciences as part of a cross-institutional cooperation (including courses with students) so that “The Bomber's Baedeker” can now be used, analysed and processed as an open, machine-readable data source in compliance with FAIR principles.
description: More information and scripts used to extract the data can be found here: https://github.com/ieg-dhr/bombers_baedeker
DOI: 10.5287/bodleian:zoedaongx
title: To subjugate a vampire: part 3
DOI: 10.6084/m9.figshare.12798296
title: Data and code from Rizzuto et al. “Forage stoichiometry predicts home range size in a small terrestrial herbivore"

description: Data and code used in Rizzuto et al. "Forage stoichiometry predicts home range size in a small terrestrial herbivore”.<br>The “SupportingCode.html” file provides an in-depth description and discussion of our R workflow to estimate home range size of snowshoe hare and investigate its relationship with the ecological stoichiometry of preferred plant forage species. <br><br>If you would like to reproduce our analyses, you can recompile the R notebook “SupportingCode.Rmd”. This is a modular document that collects the output of 8 other R notebooks. For correct compilation of the SupportingCode.Rmd file, please organize the files in this repository on your machine as follows:<br>- all .Rmd and .R files in a "../Code/“ folder- all .csv files in a "../Data/" folder- all .tiff files in a “../Data/StDMs_Rasters/Ratios/" folder- unzip the SamplePoints.zip file in a "../Data/GridPoints/" folder- all .rds files in a "../Results/" folder<br>Where the Code, Data, and Results folder all share the same root.<br>Please note that access to some shapefiles used to produce the maps in the manuscript, SI, or Supporting Code document was regulated by agreements with the Government of Newfoundland and Labrador and the Federal Government of Canada. As such, they could not be publicly shared. This does not impact the analyses, only the production of some visual supporting material (e.g., study area maps). Please contact the corresponding author (M. Rizzuto) for any question. <br> See README.md for details on the repository’s contents.
DOI: 10.6084/m9.figshare.16606766
title: Atlas de hidrología del Perú: Una evaluación presente y futura Versión 1

description: El ATLAS de Hidrología Superficial en el Perú, es parte del proyecto de apoyo a la Gestión del Cambio Climatico en su segunda fase (2019-2011), financiado por la Agencia Suiza para el Desarrollo y Cooperación (COUSDE) e Implementado por South South North (SSN) y Libélula Instituto del Cambio Global bajo la dirección del Ministerio del Ambiente (MINAM) y el Servicio de Meteorología e Hidrología del Perú (SENAMHI).<br><br><b>En el presente repositorio de figshare, muestra la informacion empleada para la construccion del modelo SWAT y los resultados obtenidos en tablas; 4 archivos de información comprimida que se de detalla:</b><br><b><br></b>1. ShapefileATLAS_Subcuencas_v1.7z (Delimitación de Subcuencas y regiones de análisis)2. RasterATLAS_Espacial_v1.7z (Información física del Modelo Numérico de Terreno, Uso/Cobertura de Suelo y Tipo de Suelo)3. RasterATLAS_ModCC_v1-7z (Información raster multianual de los modelos de Cambio Climático 2035-2065)4. TablasATLAS_Balances_v1.7z (Resultados de los Balances Hidrológicos Presente 1981-2016 y futuro 2035-2065)<br><br><b> </b>
DOI: 10.5281/zenodo.5562372
title: Environmental efficiency estimates for 127 Swiss acute care hospitals

description: These are the estimates from our enviromental efficiency estimates using frontier analysis (Stochastic Frontier Analysis and Data Envelopment Analysis) for 127 Swiss acute care hospital in 2018. For further details please see our working paper: https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3939627
DOI: 10.5281/zenodo.5562371
title: Environmental efficiency estimates for 127 Swiss acute care hospitals

description: These are the estimates from our enviromental efficiency estimates using frontier analysis (Stochastic Frontier Analysis and Data Envelopment Analysis) for 127 Swiss acute care hospital in 2018. For further details please see our working paper: https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3939627
DOI: 10.5517/ccdc.csd.cc25wwvt
title: CCDC 2022807: Experimental Crystal Structure Determination

description: Related Article: Ming-Hua You, Meng-Hua Li, Jing-Yan Liu, Mei-Jin Lin|2020|Dyes Pigm.|186|109027|doi:10.1016/j.dyepig.2020.109027
DOI: 10.5281/zenodo.5024376
title: Dataset of iodine manipulation and thyroid hormone production

description: This is the dataset of an experiment conducted on Rock pigeons (<em>Columba livia</em>) in which we restricted dietary iodine in breeding females. With this experiment we tested whether iodine availability could limit thyroid hormone production and deposition in the eggs. This dataset contains all the responses measured in this experiment.
DOI: 10.5281/zenodo.5024375
title: Dataset of iodine manipulation and thyroid hormone production

description: This is the dataset of an experiment conducted on Rock pigeons (<em>Columba livia</em>) in which we restricted dietary iodine in breeding females. With this experiment we tested whether iodine availability could limit thyroid hormone production and deposition in the eggs. This dataset contains all the responses measured in this experiment.
DOI: 10.5281/zenodo.4009277
title: Mmorph_ttl

description: This zip file containes the results of the conversion of Mmorph morphologies into the OntoLex-Lemon model, using the Turtle syntax as the serialization method. The content of the file is: 380.405 base forms and 2.534.735 fullforms, covering English, German French, Spanish ,Italian and Dutch
description: See https://zenodo.org/record/3372464#.X00GZkhR02w for some details on the MMorph to OntoLex conversion
DOI: 10.5281/zenodo.4009276
title: Mmorph_ttl

description: This zip file containes the results of the conversion of Mmorph morphologies into the OntoLex-Lemon model, using the Turtle syntax as the serialization method. The content of the file is: 380.405 base forms and 2.534.735 fullforms, covering English, German French, Spanish ,Italian and Dutch
description: See https://zenodo.org/record/3372464#.X00GZkhR02w for some details on the MMorph to OntoLex conversion
DOI: 10.5281/zenodo.5526891
title: 294-fold mini all-α protein library encoded by 7,350 amino-acid sequences (project "flood of fold" )

description: This repository includes 3 compressed archive files for the “flood-of-fold” mini-protein library project. FloodOfFolds_294_backbone_models.tar.gz includes 294 mini all-α backbone models showing distinct topologies (folds). They are poly-VAL models. FloodOfFolds_7350_designs_MODEL.tar.gz includes 7,350 design protein models in the pdb format for the 294 mini-protein library. 25 amino-acid sequences were designed for each backbone model (25 x 294 = 7,350). FloodOfFolds_7350_designs_FASTA.tar.gz includes 7,350 fasta files derived from the pdb files in FloodOfFolds_7350_designs_MODEL.tar.gz.<br> See also here for results of folding simulations: https://zenodo.org/record/5526849#.YWRhFBBBw1I Acknowledgement: K.S. and S.M. would like to deeply thank Koga laboratory at Institute for Molecular Science providing computational resources. Most of the computations for model building and folding simulations were performed using the facilities at the Research Center for Computational Science, Okazaki, Japan.
DOI: 10.5281/zenodo.5526890
title: 294-fold mini all-α protein library encoded by 7,350 amino-acid sequences (project "flood of fold" )

description: This repository includes 3 compressed archive files for the “flood-of-fold” mini-protein library project. FloodOfFolds_294_backbone_models.tar.gz includes 294 mini all-α backbone models showing distinct topologies (folds). They are poly-VAL models. FloodOfFolds_7350_designs_MODEL.tar.gz includes 7,350 design protein models in the pdb format for the 294 mini-protein library. 25 amino-acid sequences were designed for each backbone model (25 x 294 = 7,350). FloodOfFolds_7350_designs_FASTA.tar.gz includes 7,350 fasta files derived from the pdb files in FloodOfFolds_7350_designs_MODEL.tar.gz.<br> See also here for results of folding simulations: https://zenodo.org/record/5526849#.YWRhFBBBw1I Acknowledgement: K.S. and S.M. would like to deeply thank Koga laboratory at Institute for Molecular Science providing computational resources. Most of the computations for model building and folding simulations were performed using the facilities at the Research Center for Computational Science, Okazaki, Japan.
DOI: 10.5281/zenodo.5562524
title: Graphium doson decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5562523
title: Graphium doson decontaminated FSCR

description: .
DOI: 10.6073/pasta/398a519c2c0f684612667253a20f1a29
title: Bonanza Creek LTER: Active Layer Depth or Permafrost Presence for the Regional Site Network

description: Maximum active layer depth was measured during the fall at the majority of the sites in the Regional Site Network (RSN). Efforts were focused mainly on identifying which sites did and did not have frozen ground. To augment this dataset, older measurements were included for some mature sites at which the maximum active layer depths can be assumed to be fairly static. Due to time constraints, sites which we were confident had no frozen ground were not probed.
DOI: 10.15468/43yvw5
title: Corncob flower, Magnolia mixteca (M. sect. Macrophylla, Magnoliaceae) a new species endemic to the Alto Balsas Basin (Baja Mixteca), in the Pacific slopes of Oaxaca, Mexico

description: This dataset contains the digitized treatments in Plazi based on the original journal article Vázquez-García, J. Antonio, Yescas, Reyna Domínguez, Luna-Vega, Isolda, Rodríguez-Ramírez, Ernesto C., Rodríguez-Pérez, Ciro (2021): Corncob flower, Magnolia mixteca (M. sect. Macrophylla, Magnoliaceae) a new species endemic to the Alto Balsas Basin (Baja Mixteca), in the Pacific slopes of Oaxaca, Mexico. Phytotaxa 522 (3): 200-210, DOI: 10.11646/phytotaxa.522.3.3, URL: http://dx.doi.org/10.11646/phytotaxa.522.3.3
DOI: 10.6073/pasta/f6ced5af2d3bf9bca942326b7b5794a0
title: Bonanza Creek LTER: Annual Active Layer Depths at Core Floodplain Sites from 1990 to Present in the Bonanza Creek Experimental Forest near Fairbanks, Alaska

description: Annual thaw depths are measured at the time of maximum thaw at any of the 35 BCEF-LTER sites that have permafrost or intermittent seasonal frost. 1. Wildfire in the black spruce permafrost sites will cause an increase in the active layer thickness and subsidence of the surface layers that may last for up to 25 years. The active layer thickness should return to the pre-fire depths between 25 and 30 years after the fire. 2. Climate warming in interior Alaska may result in an increase in the active layer thickness in black spruce permafrost sites. 3. Fire and climate warming together may result in the elimination of permafrost from some black spruce permafrost sites in interior Alaska. 4. Forest succession on the floodplain of the Tanana River results in a gradual decrease in soil temperature as the organic layer increases with time. The development of a thick feathermoss layer in later stages of succession is especially important in the development of permafrost. Permanent or intermittent permafrost should develop in the older white spruce stages. Black spruce stands on the older terraces should be underlain by permafrost with a shallow active layer. 5. Climate warming will delay the formation of permafrost until the latest stages of forest succession and may eliminate it completely from floodplain stands.
DOI: 10.5281/zenodo.5554726
title: Mentális egészséghez köthető problémák a magyar kutatásban - ReMO workshop

description: Ez a három dokumentum a Magyar Tudományos Akadémia Fiatal Kutatók Akadémiáján, a ReMO COST action keretében tartott online előadás és beszélgetés kimenete. Az előadás témája a kutatók mentális egészsége volt. A fájlok az közönség válaszait tartalmazzák az alábbi három kérdésre: 1, Mi befolyásolja a kutatók mentális jólétét? (padlet - problemak) 2, Hogyan kezdjünk el kommunikálni, hogyan lehet a mentális egészségről beszél(get)ni a magyar kutatásban? (padlet - problemak megbeszelese) 3, Hogyan és hol lehet mentális egészségről tanulni, tudást megosztani a magyar kutatásban? (padlet - tanulasi javaslatok) Az előadáson ( 2021.10.06. 16.00 - 18.00) 70-en vettek részt. A közönség válaszai anonímek, rögzítésük padlet segítségével történt.
description: The presentation and data collection was supported by the ReMO COST Action CA19117
DOI: 10.5281/zenodo.5554725
title: Mentális egészséghez köthető problémák a magyar kutatásban - ReMO workshop

description: Ez a három dokumentum a Magyar Tudományos Akadémia Fiatal Kutatók Akadémiáján, a ReMO COST action keretében tartott online előadás és beszélgetés kimenete. Az előadás témája a kutatók mentális egészsége volt. A fájlok az közönség válaszait tartalmazzák az alábbi három kérdésre: 1, Mi befolyásolja a kutatók mentális jólétét? (padlet - problemak) 2, Hogyan kezdjünk el kommunikálni, hogyan lehet a mentális egészségről beszél(get)ni a magyar kutatásban? (padlet - problemak megbeszelese) 3, Hogyan és hol lehet mentális egészségről tanulni, tudást megosztani a magyar kutatásban? (padlet - tanulasi javaslatok) Az előadáson ( 2021.10.06. 16.00 - 18.00) 70-en vettek részt. A közönség válaszai anonímek, rögzítésük padlet segítségével történt.
description: The presentation and data collection was supported by the ReMO COST Action CA19117
DOI: 10.15468/ss5z9q
title: A novel Mariannaea species isolated from decayed pine needles in Japan

description: This dataset contains the digitized treatments in Plazi based on the original journal article Watanabe, Kohei, Hirose, Dai (2021): A novel Mariannaea species isolated from decayed pine needles in Japan. Phytotaxa 522 (3): 211-220, DOI: 10.11646/phytotaxa.522.3.4, URL: http://dx.doi.org/10.11646/phytotaxa.522.3.4
DOI: 10.5281/zenodo.4795421
title: 3D Interferometric Lattice Light-Sheet Imaging

description: This repository contains experimental data and code supporting the publication: Cao <em>et al.</em>, Volumetric Interferometric Lattice Light Sheet Imaging.<strong><em>Nat. Biotechnol. </em></strong>(2021), DOI: https://doi.org/10.1038/s41587-021-01042-y Details about the files are provided in the Readme files in the associated sub-folders. 3D-iLLS setup photos can be found in https://github.com/PertsinidisLab/3D-iLLS-photos
DOI: 10.5281/zenodo.4795420
title: 3D Interferometric Lattice Light-Sheet Imaging

description: This repository contains experimental data and code supporting the publication: Cao <em>et al.</em>, Volumetric Interferometric Lattice Light Sheet Imaging.<strong><em>Nat. Biotechnol. </em></strong>(2021), DOI: https://doi.org/10.1038/s41587-021-01042-y Details about the files are provided in the Readme files in the associated sub-folders. 3D-iLLS setup photos can be found in https://github.com/PertsinidisLab/3D-iLLS-photos
DOI: 10.34740/kaggle/dsv/2696229
title: Covid-19 in Singapore : Latest Detailed Data
DOI: 10.25810/ns7n-vh24.21
title: African Newspaper Coverage of Climate Change or Global Warming, 2004-2021 - September 2021

description:         The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.6084/m9.figshare.14792148
title: 16S phylogeny of 40 Agrobacterium spp.

description: We searched the 16S rRNA sequences in 40 Agrobacterium spp. genomes using BLASTN, extracted them using a custom Python script and then aligned with ClustalOmega. A ML phylogeny was then inferred based on these alignments with RAxML-NG 1.0.0 with the options ‘--model GTR+G4 --all’, implying the use of the model GTR+FO+G4m, and that 20 independent inferences were run, starting with 10 random trees and 10 parsimony-optimized tree, and retaining the the best ML tree from these 20 inferences. Branch supports were estimated with 200 Felsentein bootstrap trees.Another version of the tree has beenmade adding to the alignment the 16S ribosomal RNA gene sequence from <i>Rhizobium leguminosarum</i> type strain USDA 2370 (GenBank accession: U29386.1).
DOI: 10.6084/m9.figshare.14792148.v1
title: 16S phylogeny of 40 Agrobacterium spp.

description: We searched the 16S rRNA sequences in 40 Agrobacterium spp. genomes using BLASTN, extracted them using a custom Python script and then aligned with ClustalOmega. A ML phylogeny was then inferred based on these alignments with RAxML-NG 1.0.0 with the options ‘--model GTR+G4 --all’, implying the use of the model GTR+FO+G4m, and that 20 independent inferences were run, starting with 10 random trees and 10 parsimony-optimized tree, and retaining the the best ML tree from these 20 inferences. Branch supports were estimated with 200 Felsentein bootstrap trees.<br>
DOI: 10.5281/zenodo.5534254
title: Data and analysis for the paper "Non-local measurement of quasiparticle distribution in proximitized semiconducting nanowires using quantum dots"

description: This repository contains the raw data and analysis code used to generate the figures in the manuscript <em>Non-local measurement of quasiparticle distribution in proximitized semiconducting nanowires using quantum dots</em>.
DOI: 10.15468/uxpnyc
title: A new lichenicolous species of Carbonea (Ascomycota, Lecanoraceae) from northern Sweden

description: This dataset contains the digitized treatments in Plazi based on the original journal article Svensson, Måns, Westberg, Martin (2021): A new lichenicolous species of Carbonea (Ascomycota, Lecanoraceae) from northern Sweden. Phytotaxa 522 (3): 221-230, DOI: 10.11646/phytotaxa.522.3.5, URL: http://dx.doi.org/10.11646/phytotaxa.522.3.5
DOI: 10.6073/pasta/57c266dec47d3a350c3e45f39635c188
title: High Frequency Under-Ice Water Temperature Buoy Data - Crystal Bog, Trout Bog, and Lake Mendota, Wisconsin, USA 2016-2020

description: Water temperature measurements from three Wisonsin lakes. Two bog lakes are in Northern Wisconsin, Lake Mendota is in Southern Wisconsin. Thermistor chains span the full depth of each lake. See freeze dates for periods of open or frozen lake (NTL 32, DOI 10.6073/pasta/1c1acdb5489a0355f6f8bb5c496fdf8b and NTL 33, DOI 10.6073/pasta/22a5b5f8bce193353e559918b0024f9d)
DOI: 10.5281/zenodo.5562621
title: Loggerdeployment_72_2021

description: test
DOI: 10.5281/zenodo.5562620
title: Loggerdeployment_72_2021

description: test
DOI: 10.25810/8pez-h060.21
title: Asian Newspaper Coverage of Climate Change or Global Warming, 2004-2021 - September 2021

description:         The Media and Climate Change Observatory Data monitors 127 sources (across newspapers, radio and TV) in 59 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.