cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17694242
title: EGFR Exon 19 Deletion Subtypes and Osimertinib Treatment Response in Chinese NSCLC Cohort

description: This dataset contains the variant and clinical data supporting the findings of the manuscript "Sensitivity of different epidermal growth factor receptor (EGFR) exon 19 deletion subtypes to first-line osimertinib in Chinese non-small cell lung cancer patients" (currently under review at BMC Cancer).This dataset is instrumental for oncologists, cancer researchers, and bioinformaticians interested in the precision oncology of lung cancer. It allows for the independent verification of our study's conclusions and facilitates the exploration of the functional and clinical impacts of specific EGFR deletion variants.
DOI: 10.15468/dl.5kqxfb
title: Occurrence Download

description: A dataset containing 172 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Coordinate precision invalid, Footprint WKT mismatch, Country mismatch, Country derived from coordinates, Continent coordinate mismatch, Continent country mismatch, Continent derived from coordinates, Recorded date mismatch, Recorded date invalid, Taxon match fuzzy, Taxon match higher rank, The scientific name ID was not found in the checklist, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, Taxon match none, Modified date invalid, Identified date invalid, Elevation min max swapped, Multimedia URI invalid, References URI invalid, Individual count invalid, Individual count conflicts with occurrence status, Occurrence status unparsable, Occurrence status inferred from individual count)",
 "TaxonKey is Allium polyrhizum",
 "Year 1950-2025"
 ]
}

 The dataset includes 172 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004885-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gk47dg
title: Occurrence Download

description: A dataset containing 756 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arrabidaea patellifera",
 "HasCoordinate is true"
 ]
}

 The dataset includes 756 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004886-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3uhxpb
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Malaysia",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Oryctes rhinoceros",
 "Year 2000-2025"
 ]
}

 The dataset includes 164 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004889-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17694292
title: To_PYY_Myanmar_DATA_update
DOI: 10.5281/zenodo.17694293
title: To_PYY_Myanmar_DATA_update
DOI: 10.15468/dl.xu2cnp
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Faunistic review of Tetratomidae and Melandryidae (Coleoptera: Tenebrionoidea) in Lithuania with an annotated checklist of the species"
 ]
}

 The dataset includes 114 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004892-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdea4k
title: Occurrence Download

description: A dataset containing 33412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Anas carolinensis"
 ]
}

 The dataset includes 33412 records from 234 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004890-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.45xy7v
title: Occurrence Download

description: A dataset containing 324 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adenocalymma apurense",
 "HasCoordinate is true"
 ]
}

 The dataset includes 324 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004891-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57783/a4qd-z514
title: Rhode Island HCUP
DOI: 10.57783/xqya-gs90
title: Rhode Island HCUP
DOI: 10.57783/0fna-2d81
title: LibreChat-TEST
DOI: 10.15468/dl.f7czdh
title: Occurrence Download

description: A dataset containing 7847 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Apidae"
 ]
}

 The dataset includes 7847 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004894-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.csuuvp
title: Occurrence Download

description: A dataset containing 207399 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Amazona albifrons"
 ]
}

 The dataset includes 207399 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004877-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ew5hn4
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "StateProvince is one of (Santander)",
 "TaxonKey is one of (Arecaceae [GBIF Backbone Taxonomy], Ceroxylon quindiuense [GBIF Backbone Taxonomy])",
 "GadmGid is one of (COL.28.9_2, COL.28.33_2, COL.28.36_2, COL.28.61_2)"
 ]
 }
 ]
}

 The dataset includes 173 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004895-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.26r7b2
title: Occurrence Download

description: A dataset containing 406 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Cydninae (Hemiptera, Heteroptera, Cydnidae) in Brazil: updated checklist, new records, and description of Tominotus ondulatus sp. nov."
 ]
}

 The dataset includes 406 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004896-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30178012
title: data paper.docx

description: Global change drivers rebalance plant carbon allocation: Context-dependent support for the Functional Equilibrium Hypothesis
DOI: 10.6084/m9.figshare.30178012.v1
title: data paper.docx

description: Global change drivers rebalance plant carbon allocation: Context-dependent support for the Functional Equilibrium Hypothesis
DOI: 10.6084/m9.figshare.30178012.v2
title: data paper.docx

description: Global change drivers rebalance plant carbon allocation: Context-dependent support for the Functional Equilibrium Hypothesis
DOI: 10.15468/dl.f5gemc
title: Occurrence Download

description: A dataset containing 1832 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pithecoctenium crucigerum",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1832 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004898-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xcfykd
title: Occurrence Download

description: A dataset containing 12843 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum invalid, Geodetic datum assumed WGS84, Country derived from coordinates, Continent derived from coordinates, Recorded date mismatch, The taxon ID was not found in the checklist, References URI invalid, Individual count invalid, Occurrence status unparsable, Occurrence status inferred from individual count, The taxon concept ID was not found in the checklist, Modified date invalid, Footprint WKT mismatch, Country mismatch)",
 "OccurrenceStatus is Present",
 "TaxonKey is Agropyron cristatum",
 "Year 1950-2025"
 ]
}

 The dataset includes 12843 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004901-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xnkt7r
title: Occurrence Download

description: A dataset containing 2961 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bomarea edulis",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2961 records from 210 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004900-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17211000
title: Repositorio de datos primarios: Promoción y prevención mediante afiches generados por Inteligencia Artificial ¿Aliada de Una Sola Salud?
DOI: 10.5281/zenodo.17211001
title: Repositorio de datos primarios: Promoción y prevención mediante afiches generados por Inteligencia Artificial ¿Aliada de Una Sola Salud?
DOI: 10.15468/dl.gtnd68
title: Occurrence Download

description: A dataset containing 435 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is 2eb63315-3dab-4c4b-a992-8cdfb746bcea",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 435 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004902-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30480509
title: AHT_Primer

description: This dataset contains the basic SIMPSON and MATLAB scripts for numerical and analytical simulations of Cross Polarization (CP) in static condition.
DOI: 10.6084/m9.figshare.30480509.v1
title: AHT_Primer

description: This dataset contains the basic SIMPSON and MATLAB scripts for numerical and analytical simulations of Cross Polarization (CP) in static condition.
DOI: 10.34740/kaggle/dsv/13489035
title: Student Performance and Clustering Dataset
DOI: 10.15468/dl.kj8uhd
title: Occurrence Download

description: A dataset containing 551 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "DatasetKey is one of (Depredacion de Ganado por felinos en Costa Rica, Fototrampeo del Departamento de Propuestas, Dirección de Desarrollo y Comercialización de FONAFIFO, iNaturalist Research-grade Observations, Colección nacional de zoología, Resultados de los monitoreos en los Campos Geotérmicos ICE 2023, Monitoreos en los Campos Geotérmicos-ICE, INSDC Sequences, ICE-GSARHT-Monitoreo Biológico Reventazón 2023, Observation.org, Nature data from around the World, NMNH Extant Specimen Records (USNM, US))",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (840394c8-20fd-4609-af71-2271e9294895, 5ba1c336-40f9-4468-a050-f83a3fa0b3a2, 28eb1a3f-1c15-4a95-931a-4af90ecb574d, 0553362c-9393-411f-bec2-116d0c343c4c, 036cdc50-e7f5-11d9-9a0e-b8a03c50a862, ada9d123-ddb4-467d-8891-806ea8d94230, c8d737e0-2ff8-42e8-b8fc-6b805d26fc5f, bc092ff0-02e4-11dc-991f-b8a03c50a862)",
 "TaxonKey is Puma concolor"
 ]
}

 The dataset includes 551 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004903-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f9gjtn
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mammea"
 ]
}

 The dataset includes 227 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004904-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6f5c77
title: Occurrence Download

description: A dataset containing 10398 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations)",
 "Geometry POLYGON(( -123.517678884873 39.4373040777211 , -122.543147590988 39.4373040777211 , -122.543147590988 40.4429899961914 , -123.517678884873 40.4429899961914 , -123.517678884873 39.4373040777211 ))",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 10398 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004905-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbawef
title: Occurrence Download

description: A dataset containing 172 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum invalid, Geodetic datum assumed WGS84, Continent derived from coordinates, The taxon ID was not found in the checklist)",
 "OccurrenceStatus is Present",
 "TaxonKey is Allium polyrhizum",
 "Year 1950-2025"
 ]
}

 The dataset includes 172 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004906-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ebv3rg
title: Occurrence Download

description: A dataset containing 2825002 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Odonata"
 ]
}

 The dataset includes 2825002 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004899-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e231605
title: Replication data for: Rethinking Detroit

description: This paper studies the urban structure of Detroit—one that is clearly not optimal for its size—which features a business district immediately surrounded by largely vacant neighborhoods. A model is presented where residential externalities lead to multiple equilibria at the neighborhood level. Specifically, neighborhood development requires the coordination of developers and residents, without which it may remain vacant even with sound fundamentals. Given this mechanism, existing strategic visions to revitalize Detroit are evaluated within a quantitative spatial model that can rationalize Detroit's current allocations. Alternative plans that rely on "development guarantees" are also considered and shown to yield better outcomes.
DOI: 10.3886/e231605v1
title: Replication data for: Rethinking Detroit

description: This paper studies the urban structure of Detroit—one that is clearly not optimal for its size—which features a business district immediately surrounded by largely vacant neighborhoods. A model is presented where residential externalities lead to multiple equilibria at the neighborhood level. Specifically, neighborhood development requires the coordination of developers and residents, without which it may remain vacant even with sound fundamentals. Given this mechanism, existing strategic visions to revitalize Detroit are evaluated within a quantitative spatial model that can rationalize Detroit's current allocations. Alternative plans that rely on "development guarantees" are also considered and shown to yield better outcomes.
DOI: 10.15468/dl.ca5gen
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ambloplites ariommus",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031570-251025141854904/datasets/export for details.
DOI: 10.5281/zenodo.17601120
title: Dataset for SC2CD

description: Single-cell spatial transcriptomics enables the study of cellular organization. However, computational techniques for spatial clustering and cell-type decomposition are often required, as spot-based platforms such as Visium lack single-cell resolution. Although these two tasks are inherently interconnected, current approaches typically address them separately, limiting information exchange and reducing overall accuracy. We introduce SC2CD, an iterative framework that co-optimizes spatial clustering and cell decomposition through bidirectional information sharing. SC2CD integrates deep learning-based spatial clustering with matrix factorization-based decomposition, dynamically refining spatial graphs using decomposition-informed similarities while leveraging clustering results to improve local deconvolution. Unlike conventional methods that treat these tasks in isolation, SC2CD supports iterative refinement, enabling mutual enhancement. SC2CD consistently outperforms existing approaches, producing more precise spatial clusters and higher-resolution cell-type identification. By unifying spatial clustering and cell-type deconvolution within a co-optimization framework, SC2CD improves spatial transcriptomic resolution and facilitates a more comprehensive understanding of complex tissue architecture.

The datasets included here were used to evaluate and validate the SC2CD framework described in our study.
DOI: 10.5281/zenodo.17601119
title: Dataset for SC2CD

description: Single-cell spatial transcriptomics enables the study of cellular organization. However, computational techniques for spatial clustering and cell-type decomposition are often required, as spot-based platforms such as Visium lack single-cell resolution. Although these two tasks are inherently interconnected, current approaches typically address them separately, limiting information exchange and reducing overall accuracy. We introduce SC2CD, an iterative framework that co-optimizes spatial clustering and cell decomposition through bidirectional information sharing. SC2CD integrates deep learning-based spatial clustering with matrix factorization-based decomposition, dynamically refining spatial graphs using decomposition-informed similarities while leveraging clustering results to improve local deconvolution. Unlike conventional methods that treat these tasks in isolation, SC2CD supports iterative refinement, enabling mutual enhancement. SC2CD consistently outperforms existing approaches, producing more precise spatial clusters and higher-resolution cell-type identification. By unifying spatial clustering and cell-type deconvolution within a co-optimization framework, SC2CD improves spatial transcriptomic resolution and facilitates a more comprehensive understanding of complex tissue architecture.

The datasets included here were used to evaluate and validate the SC2CD framework described in our study.
DOI: 10.15468/dl.av5dqu
title: Occurrence Download

description: A dataset containing 8879 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glaucomys volans"
 ]
}

 The dataset includes 8879 records from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031569-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17488901
title: NCIT Definitions of Ontology Terms for AnnotatedBCGEData

description: This data set contains the ontology terms that are used and accessed within AnnotatedBCGEData. The list was narrowed down from nearly 200,000 to the 518 terms used in the package. This data set is called by the package when the user seeks definitions or available terms. 

Newest version added definitions for values in mapping file, removed NA values in definitions, checked for missing terms.
DOI: 10.5281/zenodo.17603177
title: NCIT Definitions of Ontology Terms for AnnotatedBCGEData

description: This data set contains the ontology terms that are used and accessed within AnnotatedBCGEData. The list was narrowed down from nearly 200,000 to the 518 terms used in the package. This data set is called by the package when the user seeks definitions or available terms. 

Newest version added definitions for values in mapping file, removed NA values in definitions, checked for missing terms.
DOI: 10.15468/dl.kbevqm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ambloplites cavifrons",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031571-251025141854904/datasets/export for details.
DOI: 10.15468/dl.vhn5kt
title: Occurrence Download

description: A dataset containing 37304070 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Poales)",
 "TaxonomicStatus is one of (Accepted, Synonym)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year is greater than 1980",
 "CoordinateUncertaintyInMeters is less than or equal to 18520"
 ]
}

 The dataset includes 37304070 records from 4946 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031539-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29109251
title: 无标题项目

description: 这是一张图片
DOI: 10.15468/dl.774fsk
title: Occurrence Download

description: A dataset containing 150043 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Amphibia [GBIF Backbone Taxonomy])",
 "Year 2015-2025"
 ]
 }
 ]
}

 The dataset includes 150043 records from 561 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009089-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.