cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.a8bxbt
title: Occurrence Download

description: A dataset containing 347 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Arabis soyeri subsp. soyeri, Arabis soyeri subsp. subcoriacea (Gren.) Breistr., Arabis stellulata Bertol., Arabis stenocarpa Boiss. & Reut., Arabis sudetica Tausch, Arabis surculosa N.Terracc., Arabis verna (L.) W.T.Aiton, Arabis vochinensis Spreng., Arachis hypogaea L., Aralia elata (Miq.) Seem.)",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "DatasetKey is one of (Pl@ntNet automatically identified occurrences, Pl@ntNet observations, iNaturalist Research-grade Observations, Observation.org, Nature data from around the World, naturgucker, Artportalen (Swedish Species Observation System), Norwegian Species Observation Service, Programme d'observation naturaliste participative avec l'application mobile INPN Espèces - Application INPN Espèces: Observations naturalistes, participatives et opportunistes, fondées sur des photographies, Species recordings from the Danish National portal Arter.dk, Lajitietokeskus/FinBIF - Notebook, general observations, Vascular plant records verified via iRecord, iRecord Surveys)",
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 500",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 347 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068610-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zsswnw
title: Occurrence Download

description: A dataset listing the 2 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Chasmanthium latifolium (Michx.) H.O.Yates"
 ]
}

 The dataset's 2 records were derived from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007331-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.52jtwt
title: Occurrence Download

description: A dataset containing 8744 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Byturus Latreille, 1797)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Observation, Specimen)",
 "Year is greater than 1945"
 ]
}

 The dataset includes 8744 records from 236 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0278473-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8bng4w
title: Occurrence Download

description: A dataset containing 1963 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Parus thruppi Shelley, 1885"
 ]
}

 The dataset includes 1963 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052553-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dgbsxz
title: Occurrence Download

description: A dataset containing 397 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Romerolagus diazi (Ferrari-Pérez, 1893)"
 ]
}

 The dataset includes 397 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007309-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rzw5a4
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Angraecum brachyrhopalon Schltr."
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008746-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xb7wsb
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boiga trigonata (Schneider, 1802)"
 ]
}

 The dataset includes 216 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005834-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pkpgpd
title: Occurrence Download

description: A dataset listing the 173184 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is iNaturalist Research-grade Observations"
 ]
}

 The dataset's 173184 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007312-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vkzufd
title: Occurrence Download

description: A dataset containing 11869 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Puma concolor (Linnaeus, 1771)"
 ]
}

 The dataset includes 11869 records from 231 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079974-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h2hpbe
title: Occurrence Download

description: A dataset containing 3062 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 9.13699235411804",
 "DecimalLongitude is less than 9.14005190730243",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 3062 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008748-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x8t1ll
title: Occurrence Download

description: A dataset containing 47687 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odocoileus virginianus (Zimmermann, 1780)"
 ]
}

 The dataset includes 47687 records from 207 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007317-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26494309
title: The genome annotation of <i>Spinibarbus caldwelli</i>

description: The genome annotation of <i>Spinibarbus caldwelli</i>
DOI: 10.5281/zenodo.13219991
title: bioimage.io upload: ilastik/plantseg_root

description: View on bioimage.io # Arabidopsis Lateral Root Traning Data 

Arabidopsis lateral root training data

Training data for cell segmentation in Arabidopsis lateral root from plantseg.
description: Training data for cell segmentation in Arabidopsis lateral root.
(Uploaded via https://bioimage.io)
DOI: 10.5281/zenodo.13219992
title: bioimage.io upload: ilastik/plantseg_root

description: View on bioimage.io # Arabidopsis Lateral Root Traning Data 

Arabidopsis lateral root training data

Training data for cell segmentation in Arabidopsis lateral root from plantseg.
description: Training data for cell segmentation in Arabidopsis lateral root.
(Uploaded via https://bioimage.io)
DOI: 10.15468/dl.22bh45
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((149.119599 -35.942299, 149.119599 -35.946791, 149.12409 -35.946791, 149.12409 -35.949037, 149.126336 -35.949037, 149.126336 -35.942299, 149.119599 -35.942299)), ((149.126336 -35.949037, 149.126336 -35.955774, 149.133073 -35.955774, 149.133073 -35.953528, 149.135319 -35.953528, 149.135319 -35.949037, 149.126336 -35.949037)))"
 ]
}

 The dataset includes 24 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048136-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13219999
title: bioimage.io upload: ilastik/livecell_dataset

description: View on bioimage.io # LIVECell 

Livecell Training Data

Traning data for cell segmentation in live-cell / phase-contrast imaging. From LIVECell—A large-scale dataset for label-free live cell segmentation.
description: LIVECell—A large-scale dataset for label-free live cell segmentation
(Uploaded via https://bioimage.io)
DOI: 10.5281/zenodo.13220000
title: bioimage.io upload: ilastik/livecell_dataset

description: View on bioimage.io # LIVECell 

Livecell Training Data

Traning data for cell segmentation in live-cell / phase-contrast imaging. From LIVECell—A large-scale dataset for label-free live cell segmentation.
description: LIVECell—A large-scale dataset for label-free live cell segmentation
(Uploaded via https://bioimage.io)
DOI: 10.15468/dl.hpttgg
title: Occurrence Download

description: A dataset containing 589151 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Quercus L."
 ]
}

 The dataset includes 589151 records from 393 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048131-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14469/hpc/14510
title: Data Discovery
DOI: 10.15468/dl.xwafme
title: Occurrence Download

description: A dataset containing 200780 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Quercus L."
 ]
}

 The dataset includes 200780 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048132-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gn4qqb
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nigeria",
 "TaxonKey is Circaetus beaudouini J.Verreaux & Des Murs, 1862"
 ]
}

 The dataset includes 65 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048138-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13220069
title: bioimage.io upload: ilastik/vnc

description: View on bioimage.io # Segmented anisotropic ssTEM dataset of neural tissue 

Segmented anisotropic ssTEM dataset of neural tissue

Training data for segmentation of neuron boundaries, mitochondria and synapses in neural tissue of Drosophila imaged in EM.
description: Training data for cell segmentation in Arabidopsis lateral root.
(Uploaded via https://bioimage.io)
DOI: 10.5281/zenodo.13220070
title: bioimage.io upload: ilastik/vnc

description: View on bioimage.io # Segmented anisotropic ssTEM dataset of neural tissue 

Segmented anisotropic ssTEM dataset of neural tissue

Training data for segmentation of neuron boundaries, mitochondria and synapses in neural tissue of Drosophila imaged in EM.
description: Training data for cell segmentation in Arabidopsis lateral root.
(Uploaded via https://bioimage.io)
DOI: 10.15468/dl.g55bwg
title: Occurrence Download

description: A dataset containing 442 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.441987 -35.95802, 147.439741 -35.95802, 147.439741 -35.971495, 147.446478 -35.971495, 147.446478 -35.969249, 147.453216 -35.969249, 147.453216 -35.964757, 147.462199 -35.964757, 147.462199 -35.969249, 147.47792 -35.969249, 147.47792 -35.964757, 147.464445 -35.964757, 147.464445 -35.962511, 147.475674 -35.962511, 147.475674 -35.95802, 147.47792 -35.95802, 147.47792 -35.955774, 147.475674 -35.955774, 147.475674 -35.953528, 147.471182 -35.953528, 147.471182 -35.946791, 147.468936 -35.946791, 147.468936 -35.942299, 147.457707 -35.942299, 147.457707 -35.946791, 147.455462 -35.946791, 147.455462 -35.942299, 147.453216 -35.942299, 147.453216 -35.93107, 147.455462 -35.93107, 147.455462 -35.924333, 147.453216 -35.924333, 147.453216 -35.919841, 147.441987 -35.919841, 147.441987 -35.924333, 147.446478 -35.924333, 147.446478 -35.926579, 147.448724 -35.926579, 147.448724 -35.949037, 147.439741 -35.949037, 147.439741 -35.953528, 147.441987 -35.953528, 147.441987 -35.95802), (147.455462 -35.946791, 147.455462 -35.949037, 147.453216 -35.949037, 147.453216 -35.946791, 147.455462 -35.946791), (147.441987 -35.95802, 147.446478 -35.95802, 147.446478 -35.962511, 147.441987 -35.962511, 147.441987 -35.95802), (147.446478 -35.95802, 147.446478 -35.955774, 147.448724 -35.955774, 147.448724 -35.953528, 147.453216 -35.953528, 147.453216 -35.95802, 147.446478 -35.95802))"
 ]
}

 The dataset includes 442 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048137-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13220123
title: bioimage.io upload: ilastik/covid_if_training_data

description: View on bioimage.io # Covid-IF Training Data 

Covid-IF Training Data

Training data for cell and nucleus segmentation as well as infected cell classification of Covid19 in immunofluorescence.
The images are taken with a high-throughput microscope and were used as training data to set up an IF based CoV19 antibody assay here.
description: Training data for cell and nucleus segmentation as well as infection classification in IF data of Covid-19 infected cells.
(Uploaded via https://bioimage.io)
DOI: 10.5281/zenodo.13220124
title: bioimage.io upload: ilastik/covid_if_training_data

description: View on bioimage.io # Covid-IF Training Data 

Covid-IF Training Data

Training data for cell and nucleus segmentation as well as infected cell classification of Covid19 in immunofluorescence.
The images are taken with a high-throughput microscope and were used as training data to set up an IF based CoV19 antibody assay here.
description: Training data for cell and nucleus segmentation as well as infection classification in IF data of Covid-19 infected cells.
(Uploaded via https://bioimage.io)
DOI: 10.15468/dl.kzw3uh
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((70.59176 13.02944,155.40824 13.02944,155.40824 46.97056,70.59176 46.97056,70.59176 13.02944))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ateuchosaurus chinensis Gray, 1845",
 "Year 2004-2024"
 ]
}

 The dataset includes 69 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048140-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13220157
title: bioimage.io upload: imjoy/LuCa-7color

description: View on bioimage.io # LuCa-7color 

documentation at https://imjoy.io/docs
description: Sample PerkinElmer Vectra QPTIFF files (c) PerkinElmer (http://www.perkinelmer.com)
(Uploaded via https://bioimage.io)
DOI: 10.5281/zenodo.13220158
title: bioimage.io upload: imjoy/LuCa-7color

description: View on bioimage.io # LuCa-7color 

documentation at https://imjoy.io/docs
description: Sample PerkinElmer Vectra QPTIFF files (c) PerkinElmer (http://www.perkinelmer.com)
(Uploaded via https://bioimage.io)
DOI: 10.15468/dl.r4tajq
title: Occurrence Download

description: A dataset containing 839 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ophiophagus hannah (Cantor, 1836)"
 ]
}

 The dataset includes 839 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048141-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pu9xmm
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Parc éolien de Fond de Fresne-Suivi environnemental - Activité chiroptères 2021 - Parc éolien Fond de Fresne"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048142-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10826124
title: Genomics polymorphisms of Staphylococcus aureus strain NCTC 8325 in the lab stock maintained at TUM (WT), after 30 passes in BHI media (D) and after 30 passes detecting 4 -fold MIC increase to isocyanide -code I16-  3 biological replicates (A,B,C), and 3 independent colonies sequenced per replicate at the end of the experiment.

description: Genomics polymorphisms of Staphylococcus aureus strain NCTC 8325 in the lab stock maintained at TUM (WT), after 30 passes in BHI media (D) and after 30 passes detecting 4 -fold MIC increase to isocyanide -code I16-  3 biological replicates (A,B,C), and 3 independent colonies sequenced per replicate at the end of the experiment. Determined from Illumina shotgun genomic sequencing datasets, mapping and analyses vs the reference genome of the strain https://www.ncbi.nlm.nih.gov/nuccore/NC_007795.1/
DOI: 10.5281/zenodo.10826125
title: Genomics polymorphisms of Staphylococcus aureus strain NCTC 8325 in the lab stock maintained at TUM (WT), after 30 passes in BHI media (D) and after 30 passes detecting 4 -fold MIC increase to isocyanide -code I16-  3 biological replicates (A,B,C), and 3 independent colonies sequenced per replicate at the end of the experiment.

description: Genomics polymorphisms of Staphylococcus aureus strain NCTC 8325 in the lab stock maintained at TUM (WT), after 30 passes in BHI media (D) and after 30 passes detecting 4 -fold MIC increase to isocyanide -code I16-  3 biological replicates (A,B,C), and 3 independent colonies sequenced per replicate at the end of the experiment. Determined from Illumina shotgun genomic sequencing datasets, mapping and analyses vs the reference genome of the strain https://www.ncbi.nlm.nih.gov/nuccore/NC_007795.1/
DOI: 10.15468/dl.65ne8g
title: Occurrence Download

description: A dataset containing 154053 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Acer L."
 ]
}

 The dataset includes 154053 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048139-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2fxdj9
title: CCDC 2261621: Experimental Crystal Structure Determination

description: Related Article: Rui-Ying Gu, Shuang Liu, Wen-Chao Zhang, Lei-Lei Li, Jia-Bao Zhu, Ming-Rui Chen, Hang Zhou|2024|Inorg.Chim.Acta|565|121978|doi:10.1016/j.ica.2024.121978
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10818246
title: Datasets underlying the paper 'Electrotaxis of self-propelling artificial swimmers in microchannels'

description: Datasets underlying the paper 'Electrotaxis of self-propelling artificial swimmers in microchannels', arXiv:2401.14376

Source data for all figures in the manuscript. Figures were produced by Python/matplotlib, a corresponding Jupyter notebook is included in the root folder. Compressed videomicrographs of the experiments, and abridged numerical data sets; all raw data are available from the authors on reasonable request.
DOI: 10.5281/zenodo.10818247
title: Datasets underlying the paper 'Electrotaxis of self-propelling artificial swimmers in microchannels'

description: Datasets underlying the paper 'Electrotaxis of self-propelling artificial swimmers in microchannels', arXiv:2401.14376

Source data for all figures in the manuscript. Figures were produced by Python/matplotlib, a corresponding Jupyter notebook is included in the root folder. Compressed videomicrographs of the experiments, raw video data are available from the authors on reasonable request.
DOI: 10.48425/c8o5jl2c
title: protocol_plant_measurements_heath_and_meadow_varanger

description: Protocol for plant measurements (point intercept frequency, species composition and shrub height) in heath and meadow sites on the Varanger peninsula.

The following datasets are based on this protocol:

* V_meadow_vascular_plant_abundance_observational
* V_heath_vascular_plant_abundance_observational
* V_meadow_plant_species_composition_observational
* V_heath_plant_species_composition_observational
* V_meadow_ground_cover_observational
* V_heath_ground_cover_observational
* V_tall_shrub_shrub_height_observational
* V_heath_shrub_height_observational

* V_meadow_vascular_plant_abundance_experimental
* V_heath_vascular_plant_abundance_experimental
* V_meadow_plant_species_composition_experimental
* V_heath_plant_species_composition_experimental
* V_meadow_ground_cover_experimental
* V_heath_ground_cover_experimental
* V_tall_shrub_shrub_height_experimental
* V_heath_shrub_height_experimental
DOI: 10.6084/m9.figshare.24460123
title: <b>Topographic heterogeneity triggers complementary cascades that enhance ecosystem multifunctionality</b>

description: Dataset on intertidal community composition and cascading facilitation effects on multiple ecosystem functions. Data associated with Fairchild <i>et al.</i>, Topographic heterogeneity triggers multiple complementary cascades to exert cornerstone effects on ecosystem multifunctionality.
DOI: 10.5284/1122121
title: Data from a Trial Trenching at Ryknield Street, Fradley and Streethay, Whittington, Lichfield, Staffordshire, 2020-2021 (HS2 Phase One)

description: This collection comprises reports, images, spreadsheets, GIS files and site records from trial trenching at Ryknield Street, Fradley and Streethay, Whittington, Lichfield, Staffordshire, conducted by Connect Archaeology from January to July 2020.
DOI: 10.6084/m9.figshare.25795486
title: High conservation importance of range-edge populations of Hooded Vultures (Necrosyrtes monachus).xlsx

description: Dataset used to write my manuscript High conservation importance of range-edge populations of Hooded Vultures (Necrosyrtes monachus)