cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.1v1qf6f/1
title: Zipped folder with SNP, GIS, and phylogenetic data

description: 1) VCF folder contains a raw and unfiltered VCF file with single nucleotide polymorphisms from ddRADseq data assembled de-novo with Stacks.
batch_2.vcf.gz

2) biovars folder contains the bioclimatic layers used to infer climatic niche divergence between mtDNA lineages
biovars.grd
biovars.gri

3) mtDNA_trees folder contains maximum clade credibility (summary) trees that include robust counting estimates of dN and dS per branch/node inferred using BEAST.
DOI: 10.5061/dryad.21705km/1
title: Concatenated_272_contigs_Nomorhamphus
DOI: 10.5061/dryad.21705km/2
title: Concatenated_272_contigs_Nomorhamphus_partition
DOI: 10.5061/dryad.21705km/3
title: Concatenated_148_contigs_Oryzias
DOI: 10.5061/dryad.21705km/4
title: Concatenated_148_contigs_Oryzias_partition
DOI: 10.5061/dryad.2hg1785/1
title: Aggression Data

description: Data for the aggression assays comparing levels of bully versus focal aggression.
DOI: 10.5061/dryad.2hg1785/2
title: Choice Data

description: Data for the choice assays, where females had the choice between a focal and competitor male.
DOI: 10.5061/dryad.2hg1785/3
title: No Choice Data

description: Data from no choice experiments, where females only exposed to focal male.
DOI: 10.5061/dryad.3r01b8d/1
title: plover genotypes

description: plover microsatellite genotypes
DOI: 10.5061/dryad.3r01b8d/2
title: plover stable isotope profile

description: plover stable isotope profile(C13,N15)
DOI: 10.5061/dryad.55hk639/1
title: Dataset S6_Cubas et al_PRSB

description: All biotic and abiotic data used in Cubas et al. (2019) "Endemic plant species are more palatable to introduced herbivores than non-endemics" can be accessed in Dataset S6.
DOI: 10.5061/dryad.57pv818/1
title: Sarvestani et al. DataFiles
DOI: 10.5061/dryad.70423j5/1
title: Simulation code and data

description: Simulation code and simulation data used in paper and supplementary information.
DOI: 10.5061/dryad.72d23g3/1
title: Freshwater vs Ovarian fluid effect on sperm traits

description: Effect of ovarian fluid compared to freshwater on different sperm traits measured every ten seconds for the first minute after sperm activation (sperm curvilinear velocity VCL, sperm linearity LIN, sperm beat-cross frequency BFC, sperm motility, proportion of motile sperm)
DOI: 10.5061/dryad.72d23g3/2
title: Repeatability measurements of sperm motility traits in freshwater and ovarian fluid

description: Repeatability measurements of sperm traits (sperm curvilinear velocity VCL, sperm linearity LIN, sperm beat-cross frequency BFC, sperm motility, proportion of motile sperm) in freshwater and ovarian fluid measured every ten seconds for the first minute after sperm activation.
DOI: 10.5061/dryad.786b9q0/1
title: Images of platelets and neutrophils in blood of flu patients

description: Transmission Electron Microscopy (TEM) of platelets isolated from influenza infected patients;  TEM of platelets incubated with sucrose-gradient purified influenza A strain, WSN/33. Fluorescent Microscopy of blood from influenza infected patients  and platelets incubated with influenza virus.
DOI: 10.5061/dryad.7nt676d/1
title: Aykanat_et_al_2019_Dryad

description: R code and associated objects to replicate main results presented in Aykanat et al, 2019, Co-inheritance of sea age at maturity and iteroparity in the Atlantic salmon vgll3 genomic region, (DOI: 10.1111/jeb.13418) (More details are given in the R code.)
DOI: 10.5061/dryad.cb8gd26/30
title: BAMM diversification edata object -- treePL

description: BAMM edata object for diversification using the treePL tree. This is an Rdata file to be loaded in R.
DOI: 10.5061/dryad.cb8gd26/32
title: BAMM niche edata object -- treePL

description: BAMM edata object for niche using the treePL tree. This is an Rdata file to be loaded in R.
DOI: 10.5061/dryad.cb8gd26/33
title: Supermatrix bootstrap trees -- BEAST

description: Saxifragales supermatrix bootstrap trees with branch lengths, dated using the BEAST-congruified approach. Used to assess the sensitivity of BAMM results to phylogenetic uncertainty.
DOI: 10.5061/dryad.cb8gd26/34
title: Supermatrix bootstrap trees -- treePL

description: Saxifragales supermatrix bootstrap trees with branch lengths, dated using the treePL approach. Used to assess the sensitivity of BAMM results to phylogenetic uncertainty.
DOI: 10.5061/dryad.cb8gd26/35
title: Occurrence records

description: A zip archive of all occurrence records used in this study in Maxent format, one file per species.
DOI: 10.5061/dryad.db543/5
title: Video Data 2

description: Video data for trial shown in Figure 1
DOI: 10.5061/dryad.db86ft8/1
title: SPPA of Picea abies mortality

description: The file consists of four sheets which present SPPA of mortality (p11{r}; p12{r} and g1,1+2 - g2,1+2 {r}) in years 1993-2013, 1993-2003 and 2003-2013:(1) overall mortality; (2) deer-caused mortality; (3) mortality due to mechanical causes and (4) mortality of unknown causes.
DOI: 10.5061/dryad.f32p4/85
title: RAD-seq raw reads Patrinia_site20-3
DOI: 10.5061/dryad.f32p4/86
title: RAD-seq raw reads Patrinia_site23-1
DOI: 10.5061/dryad.f32p4/87
title: RAD-seq raw reads Patrinia_site23-2
DOI: 10.5061/dryad.f32p4/88
title: RAD-seq raw reads Patrinia_site25-1
DOI: 10.5061/dryad.f32p4/89
title: RAD-seq raw reads Patrinia_site25-2
DOI: 10.5061/dryad.f374gf0/22
title: MADSFUL_support_tree

description: MADSFUL best maximum likelihood tree from Garli with support values from 1,000 bootstrap replicates at each node.
DOI: 10.5061/dryad.f374gf0/23
title: Plastid_support_tree

description: Plastid best maximum likelihood tree from Garli with support values from 1,000 bootstrap replicates at each node.
DOI: 10.5061/dryad.f374gf0/24
title: Waxy_support_tree

description: WAXY best maximum likelihood tree from Garli with support values from 1,000 bootstrap replicates at each node.
DOI: 10.5061/dryad.fc5c0s4/3
title: Satellite tag data for HMM analysis

description: ARGOS tracks filtered with R package crawl.
DOI: 10.5061/dryad.fc5c0s4/5
title: DTAG data for Response Intensity analysis

description: Mahalanobis distance timeseries data from DTAGs for modelling of the response intensity index
DOI: 10.5061/dryad.fc5c0s4/6
title: Script to analysis DTAG data

description: Modelling of response intensity index sensu DeRuiter et al. (2013), Biology Letters
DOI: 10.5061/dryad.fc5c0s4/7
title: Helper functions to analyse DTAG data

description: Fitting functions for response intensity index
DOI: 10.5061/dryad.fc5c0s4/8
title: Script to analyse satellite tag tracks

description: HMM analysis using R package MomentuHHM
DOI: 10.5061/dryad.fc5c0s4/9
title: Raw ARGOS satellite track data

description: Raw satellite tag data for 2015-2016 transmitted through the ARGOS system.
DOI: 10.5061/dryad.h8d2882/1
title: dickman_et_al_2019_data

description: Greenhouse and growth chamber experimental data from resurrection study of Mimulus laciniatus across species range.
DOI: 10.5061/dryad.k6483cr.2
title: Data from: A first phylogenetic analysis reveals a new arboreal tarantula genus from South America with description of a new species and two new species of Tapinauchenius Ausserer, 1871 (Araneae, Mygalomorphae, Theraphosidae)
DOI: 10.5061/dryad.mf0126f/10
title: CRUX_Creating-Reference-libraries-Using-eXisting-tools

description: https://github.com/limey-bean/CRUX_Creating-Reference-libraries-Using-eXisting-tools as of 5-10-2019
DOI: 10.5061/dryad.mf0126f/11
title: R-P-H

description: CRUX length Restricted Porter & Hajibabaei CO1 database
DOI: 10.5061/dryad.mf0126f/12
title: R-mitofish

description: CRUX length restricted mitofish reference database
DOI: 10.5061/dryad.mf0126f/13
title: R-Midori

description: CRUX length restricted Midori reference database
DOI: 10.5061/dryad.mf0126f/14
title: R-CO-ARBitrator

description: CRUX length restricted CO-ARBitrator reference database
DOI: 10.5061/dryad.mf0126f/15
title: R_UNITE

description: CRUX length restricted UNITE reference database
DOI: 10.5061/dryad.mf0126f/16
title: R-WITS

description: CRUX length restricted WITS reference database
DOI: 10.5061/dryad.ms65f29/1
title: 1) Botanical data

description: Data collected on woody plant species found in faecal samples of gorillas and chimpanzees in 184 plots of 25 x 25 m in 2014.
Data description
1-a) Plot ID: The unique code for each plot
1-b) Longitude: the longitude component of the geographical coordinates of the plots, in UTM 33 N
1-c) Latitude: the latitude component of the geographical coordinates of the plots, in UTM 33 N
1-d) Habitat type: vegetation characteristics of each plot. Values: Old secondary forest, Near primary forest, Young secondary forest, Swamp, Riparian forest
1-e) Plant ID: the unique identification of each individual plant
1-f) Plant form: Tree, liana, strangler (Ficus spp)
1-g) Species traits: the plant consumption traits indicating whether the species is preferred or fallback (see the main article, Table 2). Values: Preferred gorilla (preferred by gorillas only), Preferred chimpanzee (preferred by chimpanzee only), Preferred apes (preferred by both gorillas and chimpanzees), Fallback gorilla (fallback for gorillas only), Fallback apes (fallback for both gorillas and chimpanzees), UC (unclassified), NA (no species was found in the plot)
1-h) Scientific names genus level: the scientific names of the species, determined at the genus level in faecal samples for genus with several species consumed by great apes
1-i) Scientific names species level: the scientific names of species, determined at the species level, excepted for unidentified species
1-j) Family: the family names of species 
1-k) DBH: the diameter at breast height of the individual plant (in centimetre)
DOI: 10.5061/dryad.ms65f29/2
title: 2) Mean weight of fruits and mean number of seeds for each species

description: 2-a) Species: species names to the genus level, for genus with multiple species consumed by great apes
2-b) Family: the family name of the species
2-c) Mean weight per fruit for the species
2-d) Mean number of seeds per fruit for the species. NA: the seeds were uncountable
DOI: 10.5061/dryad.ms65f29/3
title: 3) Phenological data

description: 3-a) Date: the date of data collection
3-b) Month: the month in number
3-c) Season: Long dry season, long rainy season, short dry season, short rainy season
3-e) Plant ID: the unique identifier of each individual plant
3-f) Species: the scientific name of the species
3-g) Family: Family names
3-h) DBH: the diameter at breast height of the individual plant (in centimetre)
3-i) Basal area (in centimetre square)
3-j) Fruit score: 0 (none), 1 (few), 2 (many)
DOI: 10.5061/dryad.ms65f29/4
title: 4) Great apes nest survey for habitat selection

description: Data collected by recording individual fresh nests from April 2009 to April 2010 on 20 – 6 km transects located at 300 m from each other.
4-a) Nest ID: the unique identifier of the nest
4-b) Species: the animal species (Gorilla, Chimpanzee)
4-c) Scientific name: the scientific name of the animal species (Gorilla gorilla gorilla, Pan troglodytes troglodytes)
4-d) Season: the season when the observation was made (Long dry season, long rainy season, short dry season, short rainy season)
4-e) Habitat type: Old secondary forest, Near primary forest, Young secondary forest, Swamp, Riparian forest, Light gap
4-f) Month: the month of observation
4-g) Year: the year of observation
DOI: 10.5061/dryad.n6d4cp2/1
title: Better safe than sorry data

description: All data used in the analyses.
DOI: 10.5061/dryad.qb6v87h/1
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Amphidium mougeotii

description: nDNA and cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.qb6v87h/2
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the liverwort Barbilophozia attenuata

description: Nuclear microsatellite data from Korpelainen H. et al. (2011, Evolutionary Ecology, 25, 45–57). If you use the data in this file, please cite the original publication: Korpelainen, H., von Cräutlein, M., Laaka-Lindberg, S., & Huttunen, S. (2011) Fine-scale spatial genetic structure of a liverwort (Barbilophozia attenuata) within a network of ant trails. Evolutionary Ecology, 25, 45–57.
DOI: 10.5061/dryad.qb6v87h/3
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the liverwort Calypogeia fissa

description: cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.r2j05j8/3
title: README

description: File describing the data and pedigree.
DOI: 10.5061/dryad.t73c30m/1
title: Arctic_charr_cortisol_data_Dryad

description: Cortisol data
DOI: 10.6084/m9.figshare.12980744.v1
title: R0192_20171021a_videos

description: Rat 0192, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.17632/2psz7hz8xv.1
title: Data for: Long-term stability of iron-doped calcium titanate CaTi0.9Fe0.1O3−δ oxygen transport membranes under non-reactive and reactive atmospheres

description: Oxygen transport membranes are widely considered as a potential solution to limit the carbon footprint, but are notoriously afflicted by performance issues due to long-term chemical instability under operation conditions. This paper evaluates the stability of CaTi0.9Fe0.1O3−δ (CTF) and address its potential applicability as oxygen transport membrane material. The redox stability of CTF was investigated using thermal gravimetric up to 1000 °C under air and H2, coupled with XRD and Mossbauer analysis. The redox potential of iron was measured using an electrochemical potential relaxation as a function of temperature. The reference oxygen semi-permeability flux of dense CTF membranes was measured in air/argon or air/helium, and the stability assessed between 700 and 900 °C for up to 1600 hours, in presence of simulated operation atmospheres of dry and humidified CO, CO2, H2 and CH4. CTF shows a remarkable performance stability and post mortem XRD, SEM-EDS and Raman analyses show no evidence of decomposition or reaction byproducts.
DOI: 10.17632/2psz7hz8xv.2
title: Data for: Long-term stability of iron-doped calcium titanate CaTi0.9Fe0.1O3−δ oxygen transport membranes under non-reactive and reactive atmospheres

description: Oxygen transport membranes are widely considered as a potential solution to limit the carbon footprint, but are notoriously afflicted by performance issues due to long-term chemical instability under operation conditions. This paper evaluates the stability of CaTi0.9Fe0.1O3−δ (CTF) and address its potential applicability as oxygen transport membrane material. The redox stability of CTF was investigated using thermal gravimetric up to 1000 °C under air and H2, coupled with XRD and Mossbauer analysis. The redox potential of iron was measured using an electrochemical potential relaxation as a function of temperature. The reference oxygen semi-permeability flux of dense CTF membranes was measured in air/argon or air/helium, and the stability assessed between 700 and 900 °C for up to 1600 hours, in presence of simulated operation atmospheres of dry and humidified CO, CO2, H2 and CH4. CTF shows a remarkable performance stability and post mortem XRD, SEM-EDS and Raman analyses show no evidence of decomposition or reaction byproducts.
DOI: 10.17632/3tfh8g8kpd.1
title: Using Eye-tracking Technology to Identify Visualizers and Verbalizers- a quasi-experiment

description: This is an eye-tracking experiment to investigate whether visualizers and verbalizers present different eye-movement patterns in viewing documents with different arrangements of images and text. Combined with the questionnaire and interview approach, the current study explored the accuracy of using eye-tracking technology to identify visualizers and verbalizers, as well as possible factors contributing to different levels of accuracy.
DOI: 10.17632/9pw69f3kgf.1
title: Data for: Effects of compositions, chemical structures, and nanoporosity of sedimentary organic matter on degradation of benzo(a)pyrene by hydrogen peroxide
DOI: 10.17632/fjbpwn9mx6.1
title: Data for: Two Fold Characteristics of Swift Heavy Ion Irradiation on Co3O4/RGO Nanocomposites

description: This work presents a unique role played by swift heavy ion irradiation (SHI) on Co3O4 - reduced graphene oxide (RGO) nanocomposites in modifying its optical, magnetic and surface electronic properties. Scanning electron microscope (SEM) images reveal that these nanocomposites are in the form of decoration of RGO sheets with Co3O4 nanoparticles. On exposure to SHI, there occur delinking of the attached functional groups from RGO thus driving towards its purification. Raman spectra of irradiated samples confirm this result, where, an exponential decrease in the intensity ratio of D and G peaks of RGO with fluence occurs. At the same time, SHI generates extended defects in the form of latent tracks in decorated Co3O4 nanoparticles, thus modifying the magnetic and surface electronic properties. Results obtained from magnetization studies using SQUID magnetometer and surface electronic response from scanning Kelvin probe reveals that a linear relationship could be established between magnetization and work function of the nanocomposite. An estimation for variation of defect-induced damage fraction with fluence is made from measured work function values.
DOI: 10.17632/xvt962wptp.1
title: Eye-tracking Technology in Identifying Visualizers and Verbalizers- Data on Eye-movement Differences and Detection Accuracy

description: The data includes the differences of one typical visualizer and one typical verbalizer in viewing four sets of pictures-in-text, including the eye-movement path and fixation data (including fixation duration, fixation counts and the average time on each fixation). By analyzing the data recorded by Tobbi eye-tracker, authors predicted participants’ learning styles, compared them with the self-report results tested by Index of Learning Styles (ILS) questionnaire, and calculated the accuracy of eye-tracking technology in identifying visualizers and verbalizers. The accuracy was also enlisted
DOI: 10.5061/dryad.1vp7476/1
title: Age Polyethism

description: Data used to test for age polyethism between standing and hovering guarding. All data are from the maximum-observed guarding activity time point each day. "TaskMarkCat" is a categorical variable consisting of format "Current task_marked Day 0 task." "BeeN" is a count of bees within each Task-Marking category.
DOI: 10.5061/dryad.23420f6/1
title: Callitropsis nootkatensis southeast Alaska decline raw plot data (2011-2016)

description: Callitropsis nootkatensis canopy mortality and regeneration field-collected data from plots across southeast Alaska, USA.
DOI: 10.5061/dryad.23420f6/2
title: Callitropsis nootkatensis southeast Alaska decline summary plot data (2011-2016)

description: Callitropsis nootkatensis canopy mortality and regeneration field-collected data from plots across southeast Alaska, USA, summarized to the plot level. Additionally, this file includes extracted plot-level climate data (ClimateWNA).
DOI: 10.5061/dryad.2hg1785/4
title: P1 data

description: Paternity and offspring data where focal male was first to mate.
DOI: 10.5061/dryad.2hg1785/5
title: P2 Data

description: Paternity data where focal male was second to mate.
DOI: 10.5061/dryad.322gd5p/1
title: uraCya_heart_0.8

description: Genome assembly of an adult male blue-capped cordon-bleu (Uraeginthus cyanocephalus). NCBI BioProject (PRJNA531762) and NCBI BioSample (SAMN11381998). Note that this a "pseudohaploid" assembly created with Supernova 2.0 assembly software.
DOI: 10.5061/dryad.322gd5p/2
title: uraCya_heart_0.8.phased

description: Genome assembly of an adult male blue-capped cordon-bleu (Uraeginthus cyanocephalus). NCBI BioProject (PRJNA531762) and NCBI BioSample (SAMN11381998). Note that this a phased diploid assembly created with Supernova 2.0 assembly software.
DOI: 10.5061/dryad.3r01b8d/4
title: plover morphometric data
DOI: 10.5061/dryad.3r01b8d/5
title: plover occurrence data

description: coordinates for ecological niche modeling
DOI: 10.5061/dryad.47c8q50/1
title: Final Data, ABA Paper

description: The first sheet includes all the germination count data for each ABA rate, temperature, and block. The second sheet includes the calculated germination indices for each ABA rate, temperature, and block.
DOI: 10.5061/dryad.5cc26s8/1
title: Saunders_2019_quantinemo_simulations
DOI: 10.5061/dryad.5f3s52r/1
title: iPS-heps vs HepPre48hr_3mix_NormalizedData

description: Microarray data for iPS cells and iPS cell-derived differentiated cells, iPS cell-derived hepatocytic cells, and primary hepatocytes harvested after 48hr culture (a mixture from 3 samples).
DOI: 10.5061/dryad.62t8442/1
title: wetland_environmental_data_45variables_processed

description: 45 water and soil characteristics of study wetlands, including variables reflecting hydrology, nutrients, ionic chemistry, fertility, soil physical properties, and pesticide presence.
DOI: 10.5061/dryad.62t8442/8
title: land_cover_data_40datasets

description: Total of 40 datasets, representing 40 combinations of land cover data around study wetlands measured in 4 years of land cover data x 10 spatial extents used to extract land cover data. Contains the following .csv files: land_cover_data_10mDEM_catchment_2011
land_cover_data_10mDEM_catchment_2012
land_cover_data_10mDEM_catchment_2013
land_cover_data_10mDEM_catchment_2014
land_cover_data_25mDEM_catchment_2011
land_cover_data_25mDEM_catchment_2012
land_cover_data_25mDEM_catchment_2013
land_cover_data_25mDEM_catchment_2014
land_cover_data_30m_buffer_2011
land_cover_data_30m_buffer_2012
land_cover_data_30m_buffer_2013
land_cover_data_30m_buffer_2014
land_cover_data_100m_buffer_2011
land_cover_data_100m_buffer_2012
land_cover_data_100m_buffer_2013
land_cover_data_100m_buffer_2014
land_cover_data_200m_buffer_2011
land_cover_data_200m_buffer_2012
land_cover_data_200m_buffer_2013
land_cover_data_200m_buffer_2014
land_cover_data_300m_buffer_2011
land_cover_data_300m_buffer_2012
land_cover_data_300m_buffer_2013
land_cover_data_300m_buffer_2014
land_cover_data_500m_buffer_2011
land_cover_data_500m_buffer_2012
land_cover_data_500m_buffer_2013
land_cover_data_500m_buffer_2014
land_cover_data_1000m_buffer_2011
land_cover_data_1000m_buffer_2012
land_cover_data_1000m_buffer_2013
land_cover_data_1000m_buffer_2014
land_cover_data_2000m_buffer_2011
land_cover_data_2000m_buffer_2012
land_cover_data_2000m_buffer_2013
land_cover_data_2000m_buffer_2014
land_cover_data_5000m_buffer_2011
land_cover_data_5000m_buffer_2012
land_cover_data_5000m_buffer_2013
land_cover_data_5000m_buffer_2014
DOI: 10.5061/dryad.6b9n240/1
title: Data from cultivation experiment

description: This file contains all variables that were measured during the cultivation experiment. All figures were produced with these data. The file is in csv format. Note that the abbreviation for Chlorella is Cv and for Tetradesmus is Ao (Acutodesmus obliquus).
DOI: 10.5061/dryad.6b9n240/2
title: R file to produce statistics and figures

description: This file requires reads the data from Tejio_Nunez_2019_Ecol_Eng.csv and produces all figures (and more) and statistics that are used in the paper. Note that the file is best executed with source(). It then displays a primitive menu from which various figures or statistics can be selected to be produced. Apologies for a very basic R code!