cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8046395
title: Data and code for "Chemotaxonomy of domesticated grasses: a pathway to understanding the origins of agriculture"

description: File 'DomesticatedGrasses_spectra.txt': FTIR spectra for domesticated grass pollen, samples are in rows and wavenumbers in columns<br>File 'DomesticatedGrasses_sampleInfo.txt': metadata for each FTIR spectrum<br>The files are in the correct format to run the associated R code, which will carry out the analyses that are in the paper
DOI: 10.7294/16624663.v1
title: Corrosion Condition State Semantic Segmentation Dataset

description: <p>The data was collected from the Virginia Department of
Transportation (VDOT) Bridge Inspection Reports. The data was semantically
annotated following the corrosion condition state guidelines stated in the
American Association of State Highway and Transportation Officials (AASHTO) and
Bridge Inspector's Reference Manual (BIRM). There were four corrosion class
categories: [good, fair, poor, severe]. The dataset consisted of 440 finely
annotated images and was randomly split into 396 training images and 44 testing
images. The images were resized to 512x512 for training and testing the
DeeplabV3+ model. The original and resized images are included. After training
with the DeeplabV3+ model (DOI: 10.7294/16628668), we were able to receive an
F1 score of 86.67. More details of the training, the results, the dataset, and
the code may be referenced in the journal article. The GitHub repository
information may be found in the journal article.</p><p><br>If you are using the dataset in your work, please include <b>both </b>the journal article and the dataset citation. <br></p>
DOI: 10.5281/zenodo.842236
title: Questions For Survey Of Industry-Academia Collaborations In Software Engineering

description: Questions for survey of industry-academia collaborations in software engineering
DOI: 10.5281/zenodo.842239
title: Dataset For Survey Of Industry-Academia Collaboration In Software Engineering (Phase 1)

description: Dataset for survey of industry-academia collaboration in software engineering (phase 1)
DOI: 10.25928/bgrseis_bbhf-ifsd
title: Higher frequency data products of the International Monitoring System’s infrasound stations
title: Infrasound_hf_product
title: Datenprodukte der Infraschallstationen des internationalen Überwachungssystems für den CTBT – höherer Frequenzbereich

description: This data series consists of data products derived from broadband signal detection lists that have been processed for the certified infrasound stations of the International Monitoring System. More specifically, within the CTBT-relevant infrasound range (around 0.01-4 Hz), this data series covers higher frequencies (1-3 Hz) and is therefore called the ‘hf’ product. The temporal resolution (time step and window length) is 5 min. For processing the infrasound data, the Progressive Multi-Channel Correlation (PMCC) array processing algorithm with a one-third octave frequency band configuration between 0.01 and 4 Hz has been used. The detected signals from the most dominant directions in terms of number of arrivals within a time window and the product-specific frequency range are summarized at predefined time steps. Along with several detection parameters such as the back azimuth, apparent velocity, or mean frequency, additional quantities for assessing the relative quality of the detection parameters are provided. For each year since 2003, one dataset containing the data product of all certified IMS stations (.nc files, NetCDF format) is available as a compressed .zip file. Further information on the processing and details about the open-access data products can be found in: Hupe et al. (2021), IMS infrasound data products for atmospheric studies and civilian applications, Earth System Science Data, doi: XXX. The supplementary material of that publication includes basic example scripts for reading the .nc files in MATLAB or Python.
DOI: 10.5281/zenodo.2538489
title: AquaticEcoDynamics/GLM_Examples: v3.0.0_rc2

description: Example files for simulations reported in the GLM GMD paper (January 2019).
description: The dataset is associated with the release of GLM v3.0.0

Hipsey, M.R., Boon, C., Bruce, L.C., Weber, M., Winslow, L., Read, J.S., and Hamilton, D.P.: AquaticEcoDynamics/GLM: v3.0.0_rc2, , doi:10.5281/zenodo.2538486, 2019.
DOI: 10.6084/m9.figshare.16802473
title: Structural variants in the barley gene pool: Precision and sensitivity to detect them using short-read sequencing and their association with gene expression and phenotypic variation - supplementary data

description: SNV, INDELs, and SV data sets of the manuscript "Structural variants in the barley gene pool: Precision and sensitivity to detect them using short-read sequencing and their association with gene expression and phenotypic variation".
DOI: 10.6084/m9.figshare.16802473.v1
title: Structural variants in the barley gene pool: Precision and sensitivity to detect them using short-read sequencing and their association with gene expression and phenotypic variation - supplementary data

description: SNV, INDELs, and SV data sets of the manuscript "Structural variants in the barley gene pool: Precision and sensitivity to detect them using short-read sequencing and their association with gene expression and phenotypic variation".
DOI: 10.6084/m9.figshare.21162853.v1
title: Additional file 1 of Impact of tight blood glucose control within normal fasting ranges with insulin titration prescribed by the Leuven algorithm in adult critically ill patients: the TGC-fast randomized controlled trial

description: Additional file 1.
DOI: 10.6084/m9.figshare.21162853
title: Additional file 1 of Impact of tight blood glucose control within normal fasting ranges with insulin titration prescribed by the Leuven algorithm in adult critically ill patients: the TGC-fast randomized controlled trial

description: Additional file 1.
DOI: 10.6084/m9.figshare.21162861
title: Additional file 1 of The problem with dichotomizing quality improvement measures

description: Additional file 1.
DOI: 10.6084/m9.figshare.21162861.v1
title: Additional file 1 of The problem with dichotomizing quality improvement measures

description: Additional file 1.
DOI: 10.6084/m9.figshare.21162862
title: Additional file 1 of Systematic review on the application of 3D-bioprinting technology in orthoregeneration: current achievements and open challenges

description: Additional file 1:
DOI: 10.6084/m9.figshare.21162862.v1
title: Additional file 1 of Systematic review on the application of 3D-bioprinting technology in orthoregeneration: current achievements and open challenges

description: Additional file 1:
DOI: 10.6084/m9.figshare.21162867
title: Additional file 2 of ortho2align: a sensitive approach for searching for orthologues of novel lncRNAs

description: Additional file 2. This ZIP archive contains output files of ortho2align search for orthologues of three novel classes of lncRNAs: X-RNAs, strRNAs and seRNAs – in six species listed in the main text including genomic coordinates of those orthologues.
DOI: 10.6084/m9.figshare.21162867.v1
title: Additional file 2 of ortho2align: a sensitive approach for searching for orthologues of novel lncRNAs

description: Additional file 2. This ZIP archive contains output files of ortho2align search for orthologues of three novel classes of lncRNAs: X-RNAs, strRNAs and seRNAs – in six species listed in the main text including genomic coordinates of those orthologues.
DOI: 10.6084/m9.figshare.21162870
title: Additional file 3 of ortho2align: a sensitive approach for searching for orthologues of novel lncRNAs

description: Additional file 3. This ZIP archive contains files used for benchmarking – annotations of lncRNAs in six species in BED format along with TSV tables of orthologous correspondence between human lncRNAs and those of other species.
DOI: 10.6084/m9.figshare.21162870.v1
title: Additional file 3 of ortho2align: a sensitive approach for searching for orthologues of novel lncRNAs

description: Additional file 3. This ZIP archive contains files used for benchmarking – annotations of lncRNAs in six species in BED format along with TSV tables of orthologous correspondence between human lncRNAs and those of other species.
DOI: 10.6084/m9.figshare.21162898
title: Additional file 1 of First report on Vitamin B9 production including quantitative analysis of its vitamers in the yeast Scheffersomyces stipitis

description: Additional file 1: Supplementary tables. Table S1. Composition of the different synthetic media used in this study. Table S2. Growth conditions, biomass yields and folate production on minimal Verduyn medium. Table S3. LC/MS based qualitative determination of folic acid vitamers in S. stipitis samples in negative ion current.
DOI: 10.6084/m9.figshare.21162898.v1
title: Additional file 1 of First report on Vitamin B9 production including quantitative analysis of its vitamers in the yeast Scheffersomyces stipitis

description: Additional file 1: Supplementary tables. Table S1. Composition of the different synthetic media used in this study. Table S2. Growth conditions, biomass yields and folate production on minimal Verduyn medium. Table S3. LC/MS based qualitative determination of folic acid vitamers in S. stipitis samples in negative ion current.
DOI: 10.6084/m9.figshare.21162915
title: Additional file 2 of A descriptive study of samples sizes used in agreement studies published in the PubMed repository

description: Additional file 2.
DOI: 10.6084/m9.figshare.21162915.v1
title: Additional file 2 of A descriptive study of samples sizes used in agreement studies published in the PubMed repository

description: Additional file 2.
DOI: 10.17632/mwgxv7m927.1
title: Genetic and epigenetic regulation of mouse pancreatic islets by dietary intervention

description: In this study, we established a mouse prediabetic dietary intervention model by switching high fat diet (HFD) to normal chow diet at the prediabetic stage (HFD-CHOW group). Mice continuously fed with normal chow diet (CHOW group) or HFD (HFD group), to mimic the healthy diet or non-intervened conditions, respectively, were used as control groups to understand the genetic and epigenetic networks underlying the dietary intervention-mediated improvement of pancreatic islet β-cell function. This dataset contains processed RNA Seq, scRNA-Seq, ATAC-Seq, and CUT&Tag-Seq data from mouse (Mus musculus) islets. Details in sample collection and data analysis pipeline can be found in the Method section of the manuscript. Wild-type male C57BL/6J mice from the Jackson laboratory at 12-15 weeks of age were subjected to the above treatments for up to 6 months, followed by islet isolation and the subsequent experiments.

RNA-Seq:
	HFD_Time_scale.csv: Islet RNA-Seq data from mice fed with HFD for 1, 2, 3, and 6 months and their respective chow diet fed controls, in 2 technical replicates. Islets were pooled from at least 3 individual animals.
	Chow_HFD_HFDtoChow.csv: Islet RNA-Seq data from mice of CHOW group, HFD group, and HFD-CHOW group, in 2 technical replicates. Islets were pooled from at least 3 individual animals.

ScRNA-Seq:
	Chow.txt, HFD.txt and HFDtoChow.txt: Digital Expression Matrix (dge) of islet scRNA-Seq from mice of CHOW group, HFD group, and HFD-CHOW group. Islets were pooled from at least 3 individual animals.

ATAC-Seq:
	Chow.bw, HFD.bw and HFDtoChow.bw: BigWig files of islet ATAC-seq from mice of CHOW group, HFD group, and HFD-CHOW group. Islets were pooled from at least 3 individual animals.

CUT&Tag-Seq:
CTCF binding profile in mouse islets
	CTCF_binding_profile_in_murine_islet.bw: BigWig files of islet CTCF CUT&Tag-Seq from mice fed with chow diet for 9 months. Islets were pooled from at least 3 individual animals.
CTCF binding differences in mouse islets between CHOW and HFD groups
	Chow_islet_CTCF.bw: BigWig files of islet CTCF CUT&Tag-Seq from mice fed with chow diet for 6 months, in 2 technical replicates. Islets were pooled from at least 3 individual animals.
	Chow_islet_IgG.bw: BigWig files of islet IgG CUT&Tag-Seq from mice fed chow diet for 6 months. Islets were pooled from at least 3 individual animals.
	HFD_islet_CTCF.bw: BigWig files of islet CTCF CUT&Tag-Seq from mice fed with HFD for 6 months, in 3 technical replicates. Islets were pooled from at least 3 individual animals.
	HFD_islet_IgG.bw: BigWig files of islet IgG CUT&Tag-seq from mice fed with HFD for 6 months. Islets were pooled from at least 3 individual animals.
DOI: 10.5281/zenodo.7096131
title: SEM database of spherical objects

description: The UWB scattered Field from 5 different classes of spheres is computed in the far-field region from 0.01 to 5 GHz, for both mono and bi-static configurations, using Mie series algorithm implemented in Matlab. The scattered field is recovered for both field components Etheta and Ephi. It is recovered for multiple observation angles where θ varies from 0° to 180° with 5° step and ϕ from -180° to 180° with 10° step. The pre-processing of the scattered Field is done by extracting the natural frequencies and their associated residues from the frequency response of each simulated object using Vector Fitting algorithm implemented in MATLAB (https://www.sintef.no/projectweb/vectorfitting/). The 5 classes of spheres are: PEC sphere, sphere with a relative permittivity er= 4 and conductivity σ= 0.5, three lossless dielectric spheres with er equal to 2, 4 and 9. They are enumerated as classes 0 to 4 respectively. To reduce the size of the datasets, we include data from only three main planes; ϕ=0° and θ varies (XoZ plane), ϕ =90° and θ varies (YoZ plane), θ=90° and ϕ varies (XoY plane). The datasets contain four parameters : natural frequencies, Q-factors and their respective residues
DOI: 10.5281/zenodo.7096130
title: SEM database of spherical objects

description: The UWB scattered Field from 5 different classes of spheres is computed in the far-field region from 0.01 to 5 GHz, for both mono and bi-static configurations, using Mie series algorithm implemented in Matlab. The scattered field is recovered for both field components Etheta and Ephi. It is recovered for multiple observation angles where θ varies from 0° to 180° with 5° step and ϕ from -180° to 180° with 10° step. The pre-processing of the scattered Field is done by extracting the natural frequencies and their associated residues from the frequency response of each simulated object using Vector Fitting algorithm implemented in MATLAB (https://www.sintef.no/projectweb/vectorfitting/). The 5 classes of spheres are: PEC sphere, sphere with a relative permittivity er= 4 and conductivity σ= 0.5, three lossless dielectric spheres with er equal to 2, 4 and 9. They are enumerated as classes 0 to 4 respectively. To reduce the size of the datasets, we include data from only three main planes; ϕ=0° and θ varies (XoZ plane), ϕ =90° and θ varies (YoZ plane), θ=90° and ϕ varies (XoY plane). The datasets contain four parameters : natural frequencies, Q-factors and their respective residues
DOI: 10.6084/m9.figshare.21162955
title: DATA.xlsx

description: In the present cross-sectional study, we recorded two videos showing the interaction between an older person and a caregiver. The videos are identical in every respect except for the caregiver's attire: the caregiver is wearing a white coat in one video, and civilian clothing in the other. The study participants (135 volunteers from the general population aged 18 to 76) took part in our online survey. They watched one of the two videos and answered questions pertaining to both the older person and the caregiver.
DOI: 10.6084/m9.figshare.21162955.v1
title: DATA.xlsx

description: In the present cross-sectional study, we recorded two videos showing the interaction between an older person and a caregiver. The videos are identical in every respect except for the caregiver's attire: the caregiver is wearing a white coat in one video, and civilian clothing in the other. The study participants (135 volunteers from the general population aged 18 to 76) took part in our online survey. They watched one of the two videos and answered questions pertaining to both the older person and the caregiver.
DOI: 10.48420/20457288
title: A River Runs Through It: A multidisciplinary investigation of the impacts of the Thames Embankment construction at Chelsea 1850-1891.

description: Data and mapping from which the deep mapping was created and the basis of the creative narratives written for the PhD thesis. <br> The study area comprises the 'Physic Triangle' in Chelsea, London, UK and includes the area enclosed by the Thames and the roads now named: Royal Hospital Road West - formerly Queen's Road West and Paradise Row Tite Street Paradise Walk Ormond Gate - formerly Ormond Row Swan Walk Dilke Street Clover Mews Chelsea Embankment <br> and the following roads no longer in existence: George Place Calthorpe Place Bull Walk <br> Comprising parts of Appendices 1-5 including: <br> Appendix 1: Mapping of businesses recorded within historic Trades' directories from 1852, 1873, 1891, within the dSA. <br> Appendix 2: Transcriptions and mapping of census records made from image files downloaded from The National Archives via FindMyPast and Ancestry.com. <br> Each spreadsheet comprises 1 sheet per census enumerators book page. All data columns in the enumerators book are recreated in the spreadsheet. Additional columns record information recorded by notes or marks within the enumerators book, including seperate households at single addresses. The data recorded in the census enumerators books are transcribed as best as possible. Where writing is illegible notations including ? ... or suggestions are made. Where transcriptions held on FindMyPast or Ancestry have been used to clarify entries, this has been noted. <br> The 1851 data comprises 87 pages, of which 6 are out of the study area. <br> The 1871 data comprises 74 pages. <br> The 1891 data comprises 38 pages. <br> <br> Appendix 4: Mapping of archaeological finds and features recorded during the archaeological fieldwork carried out for this PhD in 2016. Mapping is broken down into 4 sections for ease of visibility: Battersea Bridge - Albert Bridge Albert Bridge - dSA dSA dSA - Chelsea Bridge. <br> Photographs of finds recovered from the Thames foreshore.
DOI: 10.48420/20457288.v3
title: A River Runs Through It: A multidisciplinary investigation of the impacts of the Thames Embankment construction at Chelsea 1850-1891.

description: Data and mapping from which the deep mapping was created and the basis of the creative narratives written for the PhD thesis. <br> The study area comprises the 'Physic Triangle' in Chelsea, London, UK and includes the area enclosed by the Thames and the roads now named: Royal Hospital Road West - formerly Queen's Road West and Paradise Row Tite Street Paradise Walk Ormond Gate - formerly Ormond Row Swan Walk Dilke Street Clover Mews Chelsea Embankment <br> and the following roads no longer in existence: George Place Calthorpe Place Bull Walk <br> Comprising parts of Appendices 1-5 including: <br> Appendix 1: Mapping of businesses recorded within historic Trades' directories from 1852, 1873, 1891, within the dSA. <br> Appendix 2: Transcriptions and mapping of census records made from image files downloaded from The National Archives via FindMyPast and Ancestry.com. <br> Each spreadsheet comprises 1 sheet per census enumerators book page. All data columns in the enumerators book are recreated in the spreadsheet. Additional columns record information recorded by notes or marks within the enumerators book, including seperate households at single addresses. The data recorded in the census enumerators books are transcribed as best as possible. Where writing is illegible notations including ? ... or suggestions are made. Where transcriptions held on FindMyPast or Ancestry have been used to clarify entries, this has been noted. <br> The 1851 data comprises 87 pages, of which 6 are out of the study area. <br> The 1871 data comprises 74 pages. <br> The 1891 data comprises 38 pages. <br> <br> Appendix 4: Mapping of archaeological finds and features recorded during the archaeological fieldwork carried out for this PhD in 2016. Mapping is broken down into 4 sections for ease of visibility: Battersea Bridge - Albert Bridge Albert Bridge - dSA dSA dSA - Chelsea Bridge. <br> Photographs of finds recovered from the Thames foreshore.
DOI: 10.48420/20457288.v2
title: A River Runs Through It: A multidisciplinary investigation of the impacts of the Thames Embankment construction at Chelsea 1850-1891.

description: Data and mapping from which the deep mapping was created and the basis of the creative narratives written for the PhD thesis. Comprising parts of Appendices 1-5 including: <br> Appendix 1: Mapping of businesses recorded within historic Trades' directories from 1852, 1873, 1891, within the dSA. <br> Appendix 2: Transcriptions of census records made from image files downloaded from The National Archives via FindMyPast and Ancestry.com. <br> The study area comprises the 'Physic Triangle' in Chelsea, and includes the area enclosed by the Thames and the roads now named: Royal Hospital Road West - formerly Queen's Road West and Paradise Row Tite Street Paradise Walk Ormond Gate - formerly Ormond Row Swan Walk Dilke Street Clover Mews Chelsea Embankment <br> and the following roads no longer in existence: George Place Calthorpe Place Bull Walk <br> <br> Each spreadsheet comprises 1 sheet per census enumerators book page. All data columns in the enumerators book are recreated in the spreadsheet. Additional columns record information recorded by notes or marks within the enumerators book, including seperate households at single addresses. The data recorded in the census enumerators books are transcribed as best as possible. Where writing is illegible notations including ? ... or suggestions are made. Where transcriptions held on FindMyPast or Ancestry have been used to clarify entries, this has been noted. <br> The 1851 data comprises 87 pages, of which 6 are out of the study area. <br> The 1871 data comprises 74 pages. <br> The 1891 data comprises 38 pages. <br> <br> Appendix 4: Mapping of archaeological finds and features recorded during the archaeological fieldwork carried out for this PhD in 2016. Mapping is broken down into 4 sections for ease of visibility: Battersea Bridge - Albert Bridge Albert Bridge - dSA dSA dSA - Chelsea Bridge. <br>
DOI: 10.25934/pr00006143.0
title: Available IPD datapackage for study 'A Randomized, Open Label, Parallel Group, Regional, Multicenter, Phase III Study of Oral Gefitinib (IRESSA®) Versus Intravenous Docetaxel (TAXOTERE®) in Patients With Locally Advanced or Metastatic Recurrent Non Small Cell Lung Cancer Who Have Previously Received Platinum Based Chemotherapy (ISTANA)'

description: This is a randomized, open-label, parallel group, phase III, multicenter, regional study. The total number of patients expected to be exposed to study procedures is approximately 150 patients will be recruited by investigational sites throughout the Asia Pacific region that have expertise in treating patients with NSCLC.
DOI: 10.57745/idyzjd
title: Data_article_nutrients.tab

description: Excel sheets with data
DOI: 10.57745/dohqiq
title: script_nutrients_degradation.Rmd

description: R script