cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/nkskkcpdg9.1
title: Electrical resistivity imaging data for hydrogeological and geological hazard investigations in Taiwan

description: Electrical resistivity imaging (ERI) data were collected using multi-electrode resistivity instruments with electrodes placed along profiles and connected to cables with connector boxes, which were then connected to a resistivity meter during resistivity measurements. The ERI data for hydrogeological studies includes 5 ERI profiles from Changhua, 33 from Yunlin, 36 from Yilan, 23 from Taichung, 23 from Chiayi and Tainan, and 23 from Taipei basins. In addition, time-lapse ERI profiles are presented for 10 ERI from Yilan, 10 ERI from Pingtung, 11 ERI from Taichung, and 31 ERI from Minzu basins. Moreover, 10 ERI data points were used to detect the Rusui Fault, 12 for the Qishan Fault, 13 for the Yuli Fault, and 25 for the Shanyi Fault. Totally, the data contains 265 ERI profiles with a total survey length of 59,905 m. A single ERI profile contains hundreds to thousands of subsurface apparent resistivity data points. The data was collected between 2010 and 2022 from different regions of Taiwan. 
Each survey site includes detailed data acquisition and descriptions.
DOI: 10.17632/nkskkcpdg9.2
title: Electrical resistivity imaging data for hydrogeological and geological hazard investigations in Taiwan

description: Electrical resistivity imaging (ERI) data were collected using multi-electrode resistivity instruments with electrodes placed along profiles and connected to cables with connector boxes, which were then connected to a resistivity meter during resistivity measurements. The ERI data for hydrogeological studies includes 5 ERI profiles from Changhua, 33 from Yunlin, 36 from Yilan, 23 from Taichung, 23 from Chiayi and Tainan, and 23 from Taipei basins. In addition, time-lapse ERI profiles are presented for 10 ERI from Yilan, 10 ERI from Pingtung, 11 ERI from Taichung, and 31 ERI from Minzu basins. Moreover, 10 ERI data points were used to detect the Rusui Fault, 12 for the Qishan Fault, 13 for the Yuli Fault, and 25 for the Shanyi Fault. Totally, the data contains 265 ERI profiles with a total survey length of 59,905 m. A single ERI profile contains hundreds to thousands of subsurface apparent resistivity data points. The data was collected between 2010 and 2022 from different regions of Taiwan. 
Each survey site includes detailed data acquisition and descriptions.
DOI: 10.5281/zenodo.7918583
title: BNCI_less_runs_and_channels

description: BNCI2014001 first four files with less runs and just the following channels: "Fz", "FC3", "FC1", "FCz", "FC2", "FC4", "C5"
DOI: 10.5281/zenodo.7918582
title: BNCI_less_runs_and_channels

description: BNCI2014001 first four files with less runs and just the following channels: "Fz", "FC3", "FC1", "FCz", "FC2", "FC4", "C5"
DOI: 10.5281/zenodo.7755875
title: NCOMMS-22-44310

description: Two R notebooks on calculations for manuscript NCOMMS-22-44310.
DOI: 10.5281/zenodo.7755876
title: NCOMMS-22-44310

description: Two R notebooks on calculations for manuscript NCOMMS-22-44310.
DOI: 10.5281/zenodo.7918638
title: NCOMMS-22-44310

description: Two R notebooks on calculations for manuscript NCOMMS-22-44310.
DOI: 10.5281/zenodo.7816493
title: "PROGNOSTIC ROLE OF TUMOR BUDDING IN ORAL SQUAMOUS CELL CARCINOMA"

description: Master Data Sheet
DOI: 10.5281/zenodo.7894541
title: "PROGNOSTIC ROLE OF TUMOR BUDDING IN ORAL SQUAMOUS CELL CARCINOMA"

description: Master Data Sheet
DOI: 10.34740/kaggle/dsv/5652257
title: Elon Musk Tweets
DOI: 10.34808/hzze-mj81
title: Absorption and fluorescence spectra of 1,8-diazafluoren-9-one (DFO) in PVA polymer for different  concentrations

description: Absorption and fluorescence spectra of 1,8-diazafluoren-9-one (DFO) in PVA film for different concentrations of dye.
PVA (4%). DFO concentrations: 0.0001, 0.001, 0.005 [mol/dm3].
DOI: 10.5281/zenodo.7856543
title: DBGI tropical pilot ENPKG files

description: DBGI tropical pilot mass spectrometry dataset ttl files generated through the ENPK workflow
DOI: 10.5281/zenodo.7856544
title: DBGI tropical pilot ENPKG files

description: DBGI tropical pilot mass spectrometry dataset ttl files generated through the ENPK workflow
DOI: 10.5281/zenodo.7871493
title: DBGI tropical pilot ENPKG files

description: DBGI tropical pilot mass spectrometry dataset ttl files generated through the ENPK workflow
DOI: 10.5281/zenodo.7918722
title: DBGI tropical pilot ENPKG files

description: DBGI tropical pilot mass spectrometry dataset ttl files generated through the ENPK workflow
DOI: 10.5281/zenodo.7790328
title: ATPChecker Dataset 2

description: Dataset for the ICSE 2023 technical paper ``Demystifying Privacy Policy of Third-Party Libraries in Mobile Apps". Main repository: https://doi.org/10.5281/zenodo.7647779 The first part of the dataset: 10.5281/zenodo.7787453
DOI: 10.5281/zenodo.7790327
title: ATPChecker Dataset 2

description: Dataset for the ICSE 2023 technical paper ``Demystifying Privacy Policy of Third-Party Libraries in Mobile Apps". Main repository: https://doi.org/10.5281/zenodo.7647779 The first part of the dataset: 10.5281/zenodo.7787453
DOI: 10.5281/zenodo.7907743
title: 3D brain model with DBS targets and electrodes

description: No description provided.
DOI: 10.5281/zenodo.7909349
title: 3D brain model with DBS targets and electrodes

description: No description provided.
DOI: 10.5281/zenodo.7787453
title: ATPChecker Dataset 1

description: Dataset for the ICSE 2023 technical paper ``Demystifying Privacy Policy of Third-Party Libraries in Mobile Apps". The second part of the dataset is given at: 10.5281/zenodo.7790328 Main repository: https://doi.org/10.5281/zenodo.7647779 If you can not unzip the dataset, please download the dataset from ICSE2023CodeDataset
description: {"references": ["https://arxiv.org/abs/2301.12348", "10.5281/zenodo.7624059"]}
DOI: 10.5281/zenodo.7620953
title: ATPChecker Dataset 1

description: Dataset for the ICSE 2023 technical paper ``Demystifying Privacy Policy of Third-Party Libraries in Mobile Apps". The second part of the dataset is given at: 10.5281/zenodo.7790328 Main repository: https://doi.org/10.5281/zenodo.7647779 If you can not unzip the dataset, please download the dataset from ICSE2023CodeDataset
description: {"references": ["https://arxiv.org/abs/2301.12348", "10.5281/zenodo.7624059"]}
DOI: 10.57771/w7wm-cy80
title: NGT-Dutch Hotel Review Corpus
title: NGT-HoReCo

description: <p>Parallel corpus of hotel reviews in written English, written Dutch and in Sign Language of the Netherlands (NGT) videos.</p>
DOI: 10.6084/m9.figshare.22578613.v1
title: Resveratrol intervention attenuates chylomicron secretion via repressing intestinal FXR-induced expression of scavenger receptor SR-B1

description: Two common features of dietary polyphenols have hampered our mechanistic understanding of their beneficial effects for decades: targeting multiple organs and extremely low bioavailability. We show here that resveratrol intervention (REV-I) in high fat diet (HFD)-challenged male mice inhibits chylomicron secretion, associated with reduced expression of jejunal but not hepatic scavenger receptor class B type 1 (SR-B1). Intestinal mucosa-specific SR-B1-/- mice on HFD-challenge exhibit improved lipid homeostasis but show virtually no further response to REV-I. SR-B1 expression in Caco-2 cells cannot be repressed by pure resveratrol compound while fecal-microbiota transplantation from mice on REV-I suppresses jejunal SR-B1 in recipient mice. REV-I reduces fecal levels of bile acids and activity of fecal bile-salt hydrolase. In Caco-2 cells, chenodeoxycholic acid treatment stimulates both FXR and SR-B1. We conclude that gut microbiome is the primary target of REV-I, and REV-I improves lipid homeostasis at least partially via attenuating FXR-stimulated gut SR-B1 elevation.
DOI: 10.6084/m9.figshare.22573777.v1
title: Structural mechanism of human oncochannel TRPV6 inhibition by the natural phytoestrogen genistein

description: Calcium uptake and electrophysiological data States from MD simulations
DOI: 10.6084/m9.figshare.22578613
title: Resveratrol intervention attenuates chylomicron secretion via repressing intestinal FXR-induced expression of scavenger receptor SR-B1

description: Two common features of dietary polyphenols have hampered our mechanistic understanding of their beneficial effects for decades: targeting multiple organs and extremely low bioavailability. We show here that resveratrol intervention (REV-I) in high fat diet (HFD)-challenged male mice inhibits chylomicron secretion, associated with reduced expression of jejunal but not hepatic scavenger receptor class B type 1 (SR-B1). Intestinal mucosa-specific SR-B1-/- mice on HFD-challenge exhibit improved lipid homeostasis but show virtually no further response to REV-I. SR-B1 expression in Caco-2 cells cannot be repressed by pure resveratrol compound while fecal-microbiota transplantation from mice on REV-I suppresses jejunal SR-B1 in recipient mice. REV-I reduces fecal levels of bile acids and activity of fecal bile-salt hydrolase. In Caco-2 cells, chenodeoxycholic acid treatment stimulates both FXR and SR-B1. We conclude that gut microbiome is the primary target of REV-I, and REV-I improves lipid homeostasis at least partially via attenuating FXR-stimulated gut SR-B1 elevation.
DOI: 10.6084/m9.figshare.22573777
title: Structural mechanism of human oncochannel TRPV6 inhibition by the natural phytoestrogen genistein

description: Calcium uptake and electrophysiological data States from MD simulations
DOI: 10.6084/m9.figshare.22191268.v1
title: Glioma immunotherapy enhancement and CD8-specific sialic acid cleavage by Isocitrate Dehydrogenase (IDH)-1

description: Figures 1-6
DOI: 10.6084/m9.figshare.20443095.v1
title: Vimentin is Required for Tumor Progression and Metastasis in a Mouse Model of Non-Small Cell Lung Cancer

description: Gene Ontology processes and CPM for genotypes
DOI: 10.6084/m9.figshare.22191268
title: Glioma immunotherapy enhancement and CD8-specific sialic acid cleavage by Isocitrate Dehydrogenase (IDH)-1

description: Figures 1-6
DOI: 10.6084/m9.figshare.20443095
title: Vimentin is Required for Tumor Progression and Metastasis in a Mouse Model of Non-Small Cell Lung Cancer

description: Gene Ontology processes and CPM for genotypes
DOI: 10.6084/m9.figshare.22791170.v1
title: <strong>Effect of U1 AMO (antisense morpholino oligonucleotides) on translational landscape</strong>

description: U1 snRNP could protect eukaryotic pre-mRNAs from premature mRNA 3’ end processing at thousands of intronic polyadenylation sites (PASs), a phenomenon known as U1 snRNP telescripting, or U1 snRNP inhibition of intronic premature cleavage and polyadenylation (PCPA). An outstanding question in the field is if these U1-regulated truncated forms of pre-mRNAs could be exported to the cytoplasm and have the potential to be translated. It was previously shown that some of the intronic PCPAed products induced by Spliceostatin A, a splicing modulator, might be translated in cells using Ribo-seq analysis. Here we performed similar analysis to address the question that if thousands of U1-regulated PCPAed products have the potential to be translated in the cytoplasm.
DOI: 10.5281/zenodo.4265266
title: Tara Pacific 18S-based coral host genetic analysis data release version 1

description: This dataset contains 4 tables and 3 sets of figures related to the primary analysis of the 18S metabarcoding sequencing output. This dataset is only concerned with the identity of the coral host (i.e. not additional protist diversity). The samples included in this dataset have a 'sample-material_label' value of 'CORAL' and 'sampling-protocol_label' value of 'SEQ-CS4L'. They represent the coral samples collected at all 32 of the islands visited in the Tara Pacific expedition.
description: Special thanks to the Tara Ocean Foundation, the R/V Tara crew and the Tara Pacific Expedition Participants (https://doi.org/10.5281/zenodo.3777760). We are keen to thank the commitment of the following institutions for their financial and scientific support that made this unique Tara Pacific Expedition possible: CNRS, PSL, CSM, EPHE, Genoscope, CEA, Inserm, Université Côte d'Azur, ANR, agnès b., UNESCO-IOC, the Veolia Foundation, the Prince Albert II de Monaco Foundation, Région Bretagne, Billerudkorsnas, AmerisourceBergen Company, Lorient Agglomération, Oceans by Disney, L'Oréal, Biotherm, France Collectivités, Fonds Français pour l'Environnement Mondial (FFEM), Etienne Bourgois, and the Tara Ocean Foundation teams. Tara Pacific would not exist without the continuous support of the participating institutes. The authors also particularly thank Serge Planes, Denis Allemand, and the Tara Pacific consortium.
description: {"references": ["Pesant et al., 2020. Tara Pacific samples provenance and environmental context - version 1 (Version version 1) [Data set]. Zenodo. http://doi.org/10.5281/zenodo.4068293"]}
DOI: 10.5281/zenodo.4265265
title: Tara Pacific 18S-based coral host genetic analysis data release version 1

description: This dataset contains 4 tables and 3 sets of figures related to the primary analysis of the 18S metabarcoding sequencing output. This dataset is only concerned with the identity of the coral host (i.e. not additional protist diversity). The samples included in this dataset have a 'sample-material_label' value of 'CORAL' and 'sampling-protocol_label' value of 'SEQ-CS4L'. They represent the coral samples collected at all 32 of the islands visited in the Tara Pacific expedition.
description: Special thanks to the Tara Ocean Foundation, the R/V Tara crew and the Tara Pacific Expedition Participants (https://doi.org/10.5281/zenodo.3777760). We are keen to thank the commitment of the following institutions for their financial and scientific support that made this unique Tara Pacific Expedition possible: CNRS, PSL, CSM, EPHE, Genoscope, CEA, Inserm, Université Côte d'Azur, ANR, agnès b., UNESCO-IOC, the Veolia Foundation, the Prince Albert II de Monaco Foundation, Région Bretagne, Billerudkorsnas, AmerisourceBergen Company, Lorient Agglomération, Oceans by Disney, L'Oréal, Biotherm, France Collectivités, Fonds Français pour l'Environnement Mondial (FFEM), Etienne Bourgois, and the Tara Ocean Foundation teams. Tara Pacific would not exist without the continuous support of the participating institutes. The authors also particularly thank Serge Planes, Denis Allemand, and the Tara Pacific consortium.
description: {"references": ["Pesant et al., 2020. Tara Pacific samples provenance and environmental context - version 1 (Version version 1) [Data set]. Zenodo. http://doi.org/10.5281/zenodo.4068293"]}
DOI: 10.5519/qd.vz30xtpd
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (7934 records)
DOI: 10.5281/zenodo.7859075
title: Fox_G3_CuIsotopesSI

description: Two Supporting Information Files are provided as a supplement to the Methods section of the attached manuscript. Both files are.xlsx data files. Supporting Information File 1 (Data Set S1) is an extended method for the column chromatography process undertaken for copper separation prior to isotopic analysis. Support Information File 2 (Data Set S2) provide long-term values for the in-house copper ore mineral standards used within and developed as part of this study.
DOI: 10.6084/m9.figshare.22793030.v1
title: Database for "Soil inorganic carbon stock and its changes across the Tibetan Plateau during the 1980s–2020s"

description: Database for "Soil inorganic carbon stock and its changes across the Tibetan Plateau during the 1980s–2020s"
DOI: 10.57841/casdc.0000544
title: 数据集名称（中文）数据集名称（中文）数据集名称（中文）数据集名称（中文）数据集名称（中文）
DOI: 10.5281/zenodo.7913026
title: Resources for "Disaggregating the carbon exchange of degrading permafrost peatlands using Bayesian deep learning"

description: This dataset contains all predictors, fluxes, and footprint weights used and described in our manuscript.
DOI: 10.5281/zenodo.7908588
title: Higher-order H1-conforming hierarchical basis functions for triangles and tetrahedra

description: This data set contains H1-conforming basis functions for triangular and tetrahedral finite elements. They are hierarchical in terms of the polynomial order and feature symmetries in terms of barycentric coordinates. Moreover, they are pairwise orthogonal with respect to the interpolation operator. The resulting element matrices exhibit high levels of sparsity and moderate condition numbers in the higher-order case. The functions are given in terms two different formats: *.mat MATLAB data file with a MATLAB structure. *.xml file with a structure.
DOI: 10.5281/zenodo.7908589
title: Higher-order H1-conforming hierarchical basis functions for triangles and tetrahedra

description: This data set contains H1-conforming basis functions for triangular and tetrahedral finite elements. They are hierarchical in terms of the polynomial order and feature symmetries in terms of barycentric coordinates. Moreover, they are pairwise orthogonal with respect to the interpolation operator. The resulting element matrices exhibit high levels of sparsity and moderate condition numbers in the higher-order case. The functions are given in terms two different formats: *.mat MATLAB data file with a MATLAB structure. *.xml file with a structure.
DOI: 10.5281/zenodo.7918862
title: Genome-wide association study of full body nevus count in the Brisbane Twin Nevus Study (BTNS)

description: The project uses the Brisbane Twin Nevus Study (BTNS) (N=3863)) to compare nevus counts on different anatomical sites to assess which anatomical site serves as best proxy for counting nevi on the whole body.In the project, a GWAS of nevus count on the whole body and GWAS of nevus count on the outer arm are performed.Here is the GWAS of total nevus count. Sample: GWAS analysis only includes samples of European ancestry. total nevus count were counted by trained research nurse. Genotype: All genotypes were imputed to a human haplotype map (HapMap) reference panel. Genome-wide association analyses were performed using Genome-wide Efficient Mixed model Association (GEMMA), which can account for genetically related individuals such as twins and siblings. Sex, age, age2, sex*age, sex*age2, sunburn, BSA, sun exposed hours weighted by UV index and 5 PCs, additionally two batch effect variables; were included as covariates. SNP imputation quality filter retained SNP with an INFO &gt; 0.3. minor allele frequency frequency filter was applied to retain SNP MAF &gt; 0.1 Columns include: CHR: Chromosome BP: Base pair SNP: rsID A1: Effect allele A2: Non-effect allele A1FQ: Effect allele frequency HWE: Hardy-Weinberg Equilibrium BETA: Effect estimate (of effect allele_ SEB: Standard error of beta PRB: P value N: Per SNP sample size
DOI: 10.5281/zenodo.7918861
title: Genome-wide association study of full body nevus count in the Brisbane Twin Nevus Study (BTNS)

description: The project uses the Brisbane Twin Nevus Study (BTNS) (N=3863)) to compare nevus counts on different anatomical sites to assess which anatomical site serves as best proxy for counting nevi on the whole body.In the project, a GWAS of nevus count on the whole body and GWAS of nevus count on the outer arm are performed.Here is the GWAS of total nevus count. Sample: GWAS analysis only includes samples of European ancestry. total nevus count were counted by trained research nurse. Genotype: All genotypes were imputed to a human haplotype map (HapMap) reference panel. Genome-wide association analyses were performed using Genome-wide Efficient Mixed model Association (GEMMA), which can account for genetically related individuals such as twins and siblings. Sex, age, age2, sex*age, sex*age2, sunburn, BSA, sun exposed hours weighted by UV index and 5 PCs, additionally two batch effect variables; were included as covariates. SNP imputation quality filter retained SNP with an INFO &gt; 0.3. minor allele frequency frequency filter was applied to retain SNP MAF &gt; 0.1 Columns include: CHR: Chromosome BP: Base pair SNP: rsID A1: Effect allele A2: Non-effect allele A1FQ: Effect allele frequency HWE: Hardy-Weinberg Equilibrium BETA: Effect estimate (of effect allele_ SEB: Standard error of beta PRB: P value N: Per SNP sample size
DOI: 10.25345/c59c6sb0c
title: MassIVE MSV000091897 - GNPS_broccoli_best_metadata_2023.05.10
title: Find new glucosinolates. ex : glucoraphanin, glucoerucin, glucobrassicin, etc.
DOI: 10.25345/c55m62h7g
title: MassIVE MSV000091898 - Loss of the armadillo-repeat protein Plakophilin 2 in obesity breaks cell cycle dynamics to breed adipocyte senescence
title: Plakophilin2 (PKP2) is a key component of desmosomes mostly recognized for its involvement in the fibro fatty infiltration of heart muscle under defective PKP2. While thoroughly explored in cardiomyocytes, less attention has been given to its role in fat cells. Here we report steadily increased PKP2 during adipogenesis, with expression levels reaching its apex in terminally differentiated adipocytes. Notably, the loss of this protein in adipocytes under a pro-inflammatory microenvironment demonstrates its commitment in maintaining the expression of genes required to nurture cell cycle. Then, we show that diminished expressions of this member of the armadillo repeat family in subcutaneous adipose tissue co-segregate with obesity, being normalized upon mild to intense weight loss. We also demonstrate that impaired PKP2 in human adipocytes breaks cell cycle dynamics to breed premature senescence, a key rheostat for stress induced adipose tissue dysfunction. Conversely, restoring PKP2 in inflamed adipocytes rewires E2F signalling towards re-activation of cell cycle and decreased senescence. Our findings bound the expression of PKP2 in fat cells to the physiopathology of obesity, and uncover a previously unknown defect in cell cycle and activated adipocyte senescence due to impaired PKP2.
DOI: 10.6084/m9.figshare.22793441
title: Figure 2.xlsx

description: PSAM4-GlyR in in vitro DRG culture (AAV9).
DOI: 10.6084/m9.figshare.22793441.v1
title: Figure 2.xlsx

description: PSAM4-GlyR in in vitro DRG culture (AAV9).
DOI: 10.6084/m9.figshare.22793510
title: Figure 3.xlsx

description: PSAM4-GlyR in in vivo calcium imaging in the DRG neurons.
DOI: 10.6084/m9.figshare.22793510.v1
title: Figure 3.xlsx

description: PSAM4-GlyR in in vivo calcium imaging in the DRG neurons.
DOI: 10.5281/zenodo.4672259
title: MITgcm Dataset for paper: Sensitivity analysis of a data-driven model of ocean temperature

description: MITgcm dataset used in paper, Sensitivity analysis of a data-driven model of ocean temperature, made available here. The dataset comes from running a sector config of the MITgcm model, briefly described in the paper. This dataset is used to train the regression model described in the paper. Updated to include ncra_cat_tave.nc file which was accidentally missed on first version.
DOI: 10.5281/zenodo.4672260
title: MITgcm Dataset for paper: Sensitivity analysis of a data-driven model of ocean temperature

description: MITgcm dataset used in paper, Sensitivity analysis of a data-driven model of ocean temperature, made available here. The dataset comes from running a sector config of the MITgcm model, briefly described in the paper. This dataset is used to train the regression model described in the paper.
DOI: 10.5281/zenodo.7919172
title: MITgcm Dataset for paper: Sensitivity analysis of a data-driven model of ocean temperature

description: MITgcm dataset used in paper, Sensitivity analysis of a data-driven model of ocean temperature, made available here. The dataset comes from running a sector config of the MITgcm model, briefly described in the paper. This dataset is used to train the regression model described in the paper. Updated to include ncra_cat_tave.nc file which was accidentally missed on first version.
DOI: 10.6084/m9.figshare.22793516
title: Figure 4.xlsx

description: The behaviour of mice injected with AAV9 to express PSAM4-GlyR in the DRG neurons (with and without varenicline).
DOI: 10.6084/m9.figshare.22793516.v1
title: Figure 4.xlsx

description: The behaviour of mice injected with AAV9 to express PSAM4-GlyR in the DRG neurons (with and without varenicline).