cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/vndvyddp9g
title: RULI FISH

description: The dataset consists of over 500 images of Ruli fish (Labeo rohita), categorized into two classes: "good" and "bad." These images were captured using a Samsung F62 mobile camera against a black background under daylight conditions.

Data Description:

1. Classes:

Good: Represents healthy Ruli fish exhibiting desirable characteristics such as vibrant color, uniform size, proper body shape, and absence of visible signs of damage, disease, or decay.

Bad: Includes Ruli fish with undesirable traits such as discoloration, deformities, injuries, signs of disease, decay, or physical damage.



2. Image Collection:

The dataset contains over 500 images, representing a balanced mix of good and bad Ruli fish.

Images were captured under consistent daylight conditions to ensure uniform illumination and natural appearance of the fish.

A black background was used to improve the contrast and clarity of the fish, isolating it from the environment.



3. Data Source:

Images were taken using a Samsung F62 mobile camera, providing consistent resolution and image quality throughout the dataset.

Daylight was utilized to enhance the visibility of fish details while minimizing the need for artificial lighting.



4. Annotation:

Each image is labeled according to its classification (good or bad), facilitating supervised learning tasks.

Annotations may include additional details such as bounding boxes or segmentation masks to highlight the fish area for object detection or segmentation tasks.



5. Data Preprocessing:

Preprocessing steps such as resizing, normalization, cropping, or background enhancement may have been applied to prepare the dataset for machine learning tasks.

Metadata such as camera settings, image resolution, and lighting conditions may be included to support further analysis or model optimization.



6. Data Distribution:

The dataset ensures a balanced distribution between good and bad categories to prevent bias and improve model performance.

Images were randomized during collection and organization to reduce any potential patterns or overfitting in the model.



7. Potential Applications:

The dataset can be utilized in various machine learning tasks, including image classification, object detection, and segmentation.

Applications include automated fish quality assessment, fish sorting systems for markets, disease detection, and supply chain management in aquaculture.



8. Limitations:

Variability may exist due to slight differences in camera angles, lighting conditions, or fish orientation during image capture.

The dataset focuses exclusively on Labeo rohita and may not generalize well to other fish species or environmental conditions.
DOI: 10.6084/m9.figshare.19499348.v1
title: patches and local annotations, slide 044, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.17632/t32jsmdgxc
title: Researchdata

description: A research data for study
DOI: 10.17632/dfb26jk9tm
title: Data for: Term Limit Extension and Electoral Participation. Evidence from a Diff-in-Discontinuities Design at the local level in Italy

description: Data set and do file for the manuscript "Term Limit Extension and Electoral Participation. Evidence from a Diff-in-Discontinuities Design at the local level in Italy"
DOI: 10.6084/m9.figshare.c.3662366_d699.v1
title: Full body CT scan of a Centroscymnus crepidater (BMNH 2000.2.24.4)

description: This file includes 880 DICOM files of a female Centroscumnus crepidater specimen housed in the spirit collection of the British Natural History Museum, London with registrationnumber BMNH 2000.2.24.4. The specimen is scanned in a medical CT scanner (Siemens Sensation 64) at the Royal Brompton Hospital, London at 100 kV and 210 mAs with a slice thickness of 1.00 mm.
DOI: 10.17632/tjjbj27j2h
title: Data for: Astronomical Forcing of Lake evolution in Lanzhou Basin during early Miocene period

description: Mn, Ti, K, Rb and Sr data from the Lanzhou Basin
DOI: 10.17632/yd677gvdkt
title: Engineering Survey Data 2018

description: Survey on Engineering Education in India, from Delhi, Telangana, Maharastra. We have interviewed number of engineering students to understand their problems. Based on this data, we have concluded the requirements of students
DOI: 10.6084/m9.figshare.25243147.v1
title: Raw data and Python script

description: Raw data and Python script
DOI: 10.17632/hg8gn63mkn
title: The effects of color hue and luminance on attention in combat training

description: Research hypothesis:
H1: The attention performance under the blue signal condition is significantly higher than that under the red and green signal conditions. H2: The attention performance under the high brightness signal condition is significantly higher than that under the low brightness condition.

Experimental design:
The study simulated combat training through 3D unity software and virtual reality (VR) environment, and automatically collected data in the experiment through programming. 30 college students (19-28 years old) were selected as subjects, and the test conditions included red, blue, green signals and high and low brightness. The main measurement indicators are: Reaction time (RT): measure the reaction speed of participants to color stimuli. Number of errors: measure the number of errors made by participants in the task.

Document description:
The Persistent attention experiment data integration document shows the average reaction time and number of errors of each subject in the persistent attention experiment, including the original data and the data after removing useless data.

The Selective attention experiment data integration document shows the average reaction time and number of errors of each subject in the selective attention experiment, including the original data and the data after removing useless data.

Data usage:
It can be put into SPSS software for data analysis.
DOI: 10.21233/pq83-7h09
title: Lamar vertebrate fauna dataset

description: Raw data for the Lamar vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/tm67kg6cdv
title: Parameterized life cycle inventory (LCI) data importable to Brightway2 for power-to-methane with CO2 from direct air capture

description: This folder contains data used in Zhang et al., 2017, Life Cycle Assessment of Power-to-Gas: Approaches, system variations and their environmental implications, Applied Energy (vol. 190), Pages 326-338, with some recent adaptions by the author which includes the following files:
- Foreground life cycle inventory database of Power-to-Gas (lci_P2M_PEM+DAC.xlsx): PEM electrolysis + capture of CO2 from Direct Air Capture (DAC), importable to Brightway2 (https://2.docs.brightway.dev/)
- Brightway2 import script (P2M_PEM+DAC import.ipynb)

The foreground database is linked with ecoinvent v3.6. For older version of ecoinvent (eg. as used in Zhang et al., 2017), migrations might be needed to handle differences between versions within ecoinvent. 

To use this data, please cite the following journal article: 
Zhang et al., 2017, Life Cycle Assessment of Power-to-Gas: Approaches, system variations and their environmental implications, Applied Energy (vol. 190), Pages 326-338

Updates:
- 22.04.2020, by Xiaojin Zhang
  added parameterization of PEM electrolysis used in Zhang et al., 2017
  added raw data documentation for DAC
  updated the import script, with instructions to activate parameters in Brightway2.

For questions, please contact xiaojin.zhang@psi.ch.
DOI: 10.17632/dbn4fv37xy
title: LTP induction by structural rather than enzymatic functions of CaMKII

description: Data collected, analyzed, and published in the article titled: "LTP induction by structural rather than enzymatic functions of CaMKII."
DOI: 10.17632/7mrrdzh7dw
title: Evaluating the benefit of immunotherapy for Stage III melanoma

description: Supplemental Tables
DOI: 10.17632/ydxbsjg948
title: Uncropped raw images for manuscript titled "Reduced mitochondrial apoptotic priming drives resistance to BH3 mimetics in acute myeloid leukemia"
DOI: 10.25442/hku.16468920.v1
title: Supporting data for "Role of Exercise-induced Brain-Derived Neurotrophic Factor in Muscle Adaptations"

description: This data set includes supporting data for my Ph.D. thesis including statistical analysis for immunoblotting, quantitative PCR, histology analysis, and behavior test results from animal experiments. The data provide <i>in vitro</i> and <i>in vivo</i> evidence of identifying the brain-derived neurotrophic factor as an exercise-induced myokine that promotes muscle adaptations to endurance exercise.<br>
DOI: 10.6084/m9.figshare.21545385.v1
title: Matlab code for example for five-step wavelet analysis (GaMoSEC) of rhythmic dynamics, example from Yeast time series

description: CODE: Herein, the time series data were consecutively analyzed by the five types of transformations, coined GaMoSEC, an acronym describing the methodology used (i.e., <strong>Ga</strong>ussian, <strong>Mo</strong>rlet, <strong>S</strong>ynchrosqueezing, <strong>E</strong>mpirical Wavelet Decomposition, and Wavelet<strong> C</strong>oherence). <br> EWT was made available thanks to Jerome Gilless. refer to - J.Gilles, "Empirical wavelet transform" to appear in IEEE Trans. Signal Processing, Vol.61, No.16, 3999--4010, 2013. - J.Gilles, G.Tran, S.Osher "2D Empirical transforms. Wavelets, Ridgelets and Curvelets Revisited", SIAM Journal on Imaging Sciences, Vol.7, No.1, 157--186, 2014. - J.Gilles, K. Heal, "A parameterless scale-space approach to find meaningful modes in histograms - Application to image and spectrum segmentation", International Journal of Wavelets, Multiresolution and Information Processing, Vol.12, No.6, 1450044-1--1450044-17, 2014. TIME SERIES: An autonomously oscillating culture of <em>S. cerevisiae</em> under constant environmental conditions (temperature, illumination, pH) was monitored by membrane-inlet mass spectrometry. Data were collected every 12 s at m/z = 32, 34, 40 and 44 corresponding to oxygen, H2S, argon and carbon dioxide. Argon m/z = 40 was used to correct for long-term drift in the instrument's response. Spontaneous, synchronized oscillations in a contiguous layer of <em>S. cerevisiae</em> cells loaded with 2 µM MitoSox (Invitrogen-Molecular Probes, Eugene, OR) incubated at 30°C with aeration of the perfusion buffer, were monitored by two-photon scanning laser microscopy. Yeasts were attached to a coverslip which had been coated with poly-L-lysine with unrestricted access to atmospheric oxygen on the stage of a Nikon E600FN upright microscope which was maintained at 30°C. <br> Analysis was presented in Kembro et al (2023) A dynamically coherent pattern of rhythms that matches between distant species across the evolutionary scale. Sci Rep. https://doi.org/10.1038/s41598-023-32286-0 <br>
DOI: 10.6084/m9.figshare.21700982.v1
title: Supplementary Material for: Psychological Interventions for Adult Post-Traumatic Stress Disorder Are Effective Irrespective of Concurrent Psychotropic Medication Intake: A Meta-Analysis of Randomized Controlled Trials

description: <b><i>Background:</i></b> Participants are allowed to stay on their prescribed psychotropic medication in most trials examining psychological interventions for adult post-traumatic stress disorder (PTSD). <b><i>Objectives:</i></b> We aimed to conduct the first meta-analysis investigating the potential influence of such concurrent medication on efficacy. <b><i>Method:</i></b> To this end, we searched Medline, PsycINFO, Web of Science, and PTSDpubs from inception to April 21, 2022, for trials meeting the following criteria: (1) randomized controlled trial (RCT), (2) PTSD as primary treatment focus, (3) interview-based PTSD baseline rate ≥70%, (4) <i>N</i> ≥ 20, (5) mean age ≥18 years. Trials were excluded when intake of psychotropics was not (sufficiently) reported. <b><i>Results:</i></b> Most published trials did not report on the intake of psychotropic medication. A total of 75 RCTs (<i>N</i> = 4,901 patients) met inclusion criteria. Trauma-focused cognitive behavior therapy (TF-CBT) was the most well-researched intervention. Short-term efficacy of psychological treatments did not differ by the proportion of participants taking concurrent psychotropic medication during psychological treatment in all but one analysis. In trials comparing TF-CBT and active control conditions at posttreatment, TF-CBT was more effective when most participants were concurrently medicated (<i>g</i> = 0.87, 95% CI 0.53–1.22) rather than unmedicated (<i>g</i> = 0.27; 95% CI 0.01–0.54, <i>p</i> = 0.017), with younger age (<i>b</i><sub>1</sub> = −0.04, <i>p</i> = 0.008) and higher proportion of females (<i>b</i><sub>1</sub> = 0.01, <i>p</i> = 0.014) being associated with higher efficacy only in trials with high proportions of medicated participants. No differences in efficacy by proportions of participants taking concurrent psychotropic medication were found at follow-up. <b><i>Conclusions:</i></b> Results suggest that psychological interventions are effective for PTSD irrespective of concurrent intake of psychotropics.
DOI: 10.6084/m9.figshare.28246343.v1
title: Haplotype-resolved assemblies Hap1 and Hap2 in the T2T-pig1.0 genome

description: The haplotype-resolved contigs for Hap1 and Hap2 assemblied of T2T-pig1.0 by using Hi-C, ONT, and HiFi reads.
DOI: 10.17632/c5ww797rfb
title: Development of the FUMILI minimization package

description: Abstract The suggested FUMILI package development has the following advantages: a more convenient and friendly user interface; no limit on the number of parameters and experimental points; speed advantage when the number of parameters is high enough; there are options to ignore wrong experimental points and correct experimental errors. The preliminary scan is envisaged for complicated tasks. All programs are written in FORTRAN-77. The investigation has been performed at the Veksler and Baldin Laborato... Title of program: FUMILIM Catalogue Id: AEQF_v1_1 Nature of problem To minimise χ 2 -functional. Versions of this program held in the CPC repository in Mendeley Data AEQF_v1_0; FUMILIM; 10.1016/j.cpc.2013.08.001 AEQF_v1_1; FUMILIM; 10.1016/j.cpc.2014.05.015 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/jdd7rf8bmn
title: Semantic Segmentation-Based Intermonthly Land Cover Mapping for Graz, Austria and Portorož-Izola-Koper Region, Slovenia (2017-2021)

description: This dataset provides intermonthly mapping of land cover changes from the period 2017 to 2021 for the region of Graz, Austria, and the coastal region of Portorož, Izola, and Koper in Slovenia.

In the Graz region, images were procured within the WGS84 bounding box defined by the coordinates [15.390816°, 46.942176°, 15.515785°, 47.015961°], accounting for a total of 40 images. The region of Portorož, Izola, and Koper in Slovenia, contained within the WGS84 bounding box [13.590260°, 45.506948°, 13.744411°, 45.554449°], yielded a total of 41 images. All images obtained maintain minimal cloud coverage and have a spatial resolution of 10 meters.

Comprised within this dataset are raw Sentinel-2 images in numpy format in conjunction with True Color (RGB) images in PNG format, each procured from Sentinel Hub. The ground truth label data is preserved in numpy format and has been additionally rendered in color-coded PNGs. The dataset also includes land cover maps predicted for the test set (2020-2021), as outlined in the research article, available at https://doi.org/10.3390/s23146648. Each file adheres to a nomenclature denoting the year and the month (e.g., 2017_1 corresponds to an image/ground truth/prediction for the January 2017).

Initial ground truth was obtained using the ESRI's UNet model, available at https://www.arcgis.com/home/item.html?id=afd124844ba84da69c2c533d4af10a58 (accessed on 25 July 2023). Subsequent manual corrections were administered to enhance the accuracy and integrity of the data. The Graz region contains 12 distinct classes, while the region of Portorož-Izola-Koper comprises 13 classes.

The dataset is structured as follows:
- 'classes.txt' contains a list of land cover classes,
- '/data' hosts the Sentinel-2 imagery,
-- '/data/numpy' retains Sentinel-2 images featuring 13 basic spectral layers (B01–B12) in numpy format,
-- '/data/true_color_png' stores True Color (RGB) images in PNG format,
- '/ground_truth' contains ground truth,
-- '/ground_truth/numpy' houses ground truth in numpy format with values ranging from 0 to 14 representing distinct classes,
-- '/ground_truth/color_labeled_png' contains color-labeled images in PNG format.
- '/predictions' contains predicted land cover maps for the test set from the associated research paper,
-- '/predictions/numpy' has predictions in numpy format with values ranging from 0 to 14 representing distinct classes,
-- '/predictions/color_labeled_png' contains color-labeled images in PNG format.

All these directories further include subdirectories '/graz' and '/portoroz_izola_koper' corresponding to the two regions covered in the datasets.

Acknowledgments:
Should you find this dataset useful in your work, we kindly request that you acknowledge its origin by citing the following article:
Kavran, D.; Mongus, D.; Žalik, B.; Lukač, N. Graph Neural Network-Based Method of Spatiotemporal Land Cover Mapping Using Satellite Imagery. Sensors 2023, 23, 6648. https://doi.org/10.3390/s23146648.
DOI: 10.17632/vsfpptz5sw
title: Comparison of pre and post-combustion capture in a typical sugarcane mill

description: A. Electronic Supplementary Information for BECCS opportunities in Brazil: comparison of pre and post-combustion capture in a typical sugarcane mill. This section presents all detailed information for CCUS integration with sugarcane mill in all cases: configuration parameters and capital cost estimation
DOI: 10.17632/cdn6n84hmp
title: LINF_150023300

description: PSF1-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/gh8n2wbg4x
title: Supplemental materials for paper: EFFECT OF DEMOCRATIC LEADERSHIP STYLE, ORGANIZATIONAL CULTURE ON LECTURERS’ PERFORMANCE

description: This data is raw data on research on democratic leadership style, organizational culture, commitment to organization, confidence and the performance of lecturers in universities in Lombok Timur RegencyIndonesia
DOI: 10.17632/bxx9t42d4f
title: Data for: Heterogeneity of the Mineralogy and Organic Content of the Tuscaloosa Marine Shale

description: These are the mineralogical and geochemical data from conventional and rotary sidewall cores from 11 wells in the Tuscaloosa Marine Shale.
DOI: 10.17632/fsp73bzx4j
title: Mechanisms underlying the role of Fe3O4 in enhancing antibiotic degradation and mitigating the spread of antibiotic resistance in aquaculture sediment: coupling dissimilatory iron reduction with methanogenesis

description: The dataset contains the raw data of the Fig.1, Fig.2, Fig. 3, Fig. 4, Fig.5, Fig.6, Fig.7, Fig.S1, Fig. S2, Fig. S3, Fig. S4, Fig. S5, Fig. S6, Fig. S7 and Fig. S8. Research data includes the follows: first-order rate constants for SMX degradation under varying operational parameters; degradation products of SMX; the log-transformed absolute copies of the target ARGs and integron gene under different treatments; the composition and difference of the bacterial communities; correlations of bacterial community at ASV level, ARG abundance. The fold changes of ETS activity in the different treatments. (B) The changes of physiological and biochemical indicators related to oxidative stress. Aboudances of genes and functions related to Methane metabolism pathway, ARG-related functions and function genes associated with biofilm formation, antioxidant, and mating pair formation system; Quantitative X-ray diffraction spectra of synthetic goethite; XRD spectra of the tested sediment; Soluble Fe2+ concentrations in the different treatments; SMX degradation with time within 7 days; Change of CH4 production in the different treatments; Heatmap of abundance for methanogens communities at genus level; Log-transformed absolute copies of sulI and sulII in the different treatments with time; Comparison of Alpha diversity of the bacterial community in the different treatments.
DOI: 10.17632/6wv6xrb3h2
title: Leadership Emoji Study 2

description: Study 2 SPSS dataset
DOI: 10.17632/prdgmjcg69
title: Dataset for the paper: Assessing the impact of forest management and climate on a peatland under Scots pine monoculture using a multidisciplinary approach

description: This data set includes palaeoecological data from Okoniny peatland that were published in the paper:
Bąk, M., Lamentowicz, M., Kołaczek, P., Wochal, D., Matulewski, P., Kopeć, D., Wietecha, M., Jaster, D., Marcisz, K., 2024. Assessing the impact of forest management and climate on a peatland under Scots pine monoculture using a multidisciplinary approach.
Publication available under a link: https://doi.org/10.5194/egusphere-2024-1308

The study was funded by the National Science Centre, Poland, grant 2020/39/D/ST10/00641. Remote sensing data collection and visualization were done within the scope of the project “Protection of Valuable Ecosystems of Tuchola Forest" funded by the European Economic Area Financial Mechanism 2014-2021 within the framework of the Environment, Energy and Climate Change Programme MF EEA 2014-2021 "Implementation of Ecosystem Management Plans".

The data set includes several proxies: 
- 14C dates and peat accumulation rates, bulk density
- Testate amoebae and depth to water table reconstruction
- Pollen and NPP
- Plant macrofossils
- Macroscopic and microscopic charcoal
- Dendroclimatic data
DOI: 10.57935/agr.25403449.v1
title: Supplementary Data 1 for DOI: 10.1002/mbo3.1404

description: Supplementary data for the manuscript:Phimister FD, Anderson RC, Thomas DG, Farquhar MJ, Maclean P, Jauregui R, Young W, Butowski CF & . Bermingham EN (2024). Using Meta-analysis to Understand the Impacts of Dietary Protein and Fat Content on the Composition of Fecal Microbiota of Domestic Dogs (Canis lupus familiaris): A Pilot Study. <i>MicrobiologyOpen</i> DOI: 10.1002/mbo3.1404
DOI: 10.17632/2yxs3pk9fm
title: Data for: Automatic prediction of stress in piglets (Sus Scrofa) using infrared skin temperature

description: When working with bigdata, it is common to come across imprecise, conflicting, and lack of data. Extracting useful information from inaccurate data is a challenge for IT in general. Depending on the data source, conflicting data can be presented and the usual procedures do not allow the direct treatment of such data. The prompt is that contradictory information is as vital as other information or may even be the key to indicating crucial information. Although there are methods for handling fuziness, such methods are not able to adequately address the concept of inconsistency. In this essay, we present a method that can directly deal with the concepts of imprecision, inconsistency, and paracompleteness (lack of data) in a non-trivial way. Such methodology is based on the paraconsistent annotated logic E that allows manipulating such concepts. Based on this logic was built the para-analyzer algorithm, a logic analyzer that allows analyzing the concepts mentioned. Based on the para-analyzer, a small expert system was built, which then decides imprecise, contradictory and incomplete data. The suggested method can be used in a variety of subjects, especially where there is imprecision in the data, conflicting data, and lack of data.
DOI: 10.17632/t2wp7myg9v
title: Music Reconstruction using Generative Adversarial Networks 

description: Dataset for music improvisation using Generative Adversarial Networks