cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.s7g70j0/1
title: Data_herbiore_meta-analysis

description: This file contains the mean effect sizes, standard errors, and sample sizes for a variety of plant measurements extracted from studies that compared two types of vegetation plots: those in areas where herbivores were excluded and those in open control areas. Each comparison is linked to a variety of other site and study characteristics. We identified exclosure studies using the following search in the ISI Web of Science database [TS= (exclu* OR exclo* OR insecticide* OR pesticide* OR molluscicide*) AND (forest* OR grassland* OR savann*)] for published between 1980 and November 2016. Studies were included if they met the following criteria: (i) Measured plant vegetation metrics in multiple replicates of both experimental treatments of native herbivore exclusion, either via physical exclosures or pesticides, and in control areas (observational and herbivory simulation studies were excluded); (ii) Located in terrestrial environments broadly classified as natural with vegetation classified as forest, grassland or savanna (we excluded studies from aquatic systems, intertidal areas, wetlands, and disturbed habitats such as clear cut forests, recently burned grasslands, or abandoned fields); (iii) Provided treatment means, sample sizes, and variances, or these could be extracted from the figures using software GetData Graph Digitizer. Version 2.26 (getdata-graph-digitizer.com/). We excluded studies focused on exclusion of non-native, invading, introduced, or domestic species, but we included naturally vegetated sites even if these were hunted, had predator losses or had other selective extinctions, or were selectively logged forests. For studies with repeated measures, we only extracted the final time to capture the possible longest time of the herbivory effects. NPP, net primary productivity.
DOI: 10.5061/dryad.vv76g/1
title: chick rejection data (full dataset)

description: Data on the response (rejection behaviour) to the chicks according to 1) the chick species, 2) the presence or absence of down-feathers, 3) hatching order, 4) whether an adult cuckoo visited their nest or whether it was parasitized artificially, and/or 5) whether or not a cuckoo chick was in the minority in the nest.
DOI: 10.5061/dryad.vv76g/2
title: chick rejection data (reduced dataset)

description: a reduced dataset comprising only one experimental chick per nest
DOI: 10.17632/226zz69bk9.1
title: Data for: Modeling the dynamics of recognition memory testing with a combined model of retrieval and decision making

description: Data from Experiment 1, which manipulates list length between 24 and 96 items, normative word frequency (LF vs. HF), and the length of the retention interval.
DOI: 10.17632/7hmk9zdxcc.1
title: Data for: Effect of C-Arm Tilt on Accuracy of Intraoperative Fluoroscopy in assessing Acetabular Component Position during Direct Anterior Hip Arthroplasty

description: Mathematical model and illustrative cases for c-arm tilt's effect on intraoperative fluoroscopy images of acetabular components in direct anterior hip arthroplasty
DOI: 10.17632/9g2jg4r8hd.1
title: Data for: Network meta-analysis of diagnostic test accuracy studies allowing for multiple tests at multiple thresholds

description: This dataset provides diagnostic test accuracy data of 13 studies assessing cognitive screening tests for the diagnosis of dementia and cognitive impairment in stroke-survivors. The screening tests of interest were Mini Mental State Examination at thresholds of &lt;25 and &lt;27, and Montreal Cognitive Assessment (MoCA) at thresholds of &lt;22 and &lt;26.
DOI: 10.17632/fmccr79nx4.1
title: Data for: Utilizing Text Recognition for the Defects Extraction in Sewers CCTV Inspection Videos

description: Dataset used for training Tesseract OCR and the trained OCR model
DOI: 10.17632/j2w4fnxfp6.1
title: Data for: A composite sandwich plate with a novel core design

description: FE model of the sandwich structure
DOI: 10.17632/wrwhbbptg8.2
title: Spatiotemporal group dynamics in a long-distance migratory bird

description: This data is supporting information for: Dhanjal-Adams KL. Bauer S, Emmenegger T, Hahn S, Lisovski S, Liechti F (in revision) Spatiotemporal group dynamics in a long-distance migratory bird. Current Biology Data include html of pressure, html of geolocation code. Bird tracks, raw light and pressure data are archived on movebank, under project number 502110670 and can be requested via this link: http://www.movebank.org/panel_embedded_movebank_webapp?gwt_fragment=page=studies,path=study502110670
DOI: 10.17632/y9b24fnvj2.1
title: Data for: General closed-form solution for shear strength estimate of RC elements based on panel response

description: Test database of shearwalls, deep beams, corbels and beam-column joints.
DOI: 10.5061/dryad.06186q2/1
title: The relative abundance of PFGs

description: Results of Tukey's test of the relative abundance
(Mean ± SD) of PFGs in different experimental treatments.
DOI: 10.5061/dryad.06186q2/2
title: Community structure

description: Results of Tukey's test of plant species richness, stand density, and canopy height in different
experimental treatments (Mean ± SD).
DOI: 10.5061/dryad.06186q2/3
title: Biodiversity and ecosystem function

description: Results of Tukey's test of plant species diversity,
functional diversity, and aboveground biomass in different
experimental treatments (Mean ± SD).
DOI: 10.5061/dryad.06186q2/4
title: Structural equation modeling

description: Structural equation modeling of grazing and drought
to predict community structure and biodiversity & ecosystem function by regulating the plant functional groups.
DOI: 10.5061/dryad.06186q2/5
title: Two-way ANOVA

description: Two-way ANOVA on the effects of grazing, drought and their interactive effects on relative abundance of plant functional groups (i.e., perennial bunchgrasses, perennial rhizome grass, perennial forbs, annuals and biennials), community structures (i.e., species richness, stand density, canopy height), and biodiversity and ecosystem functions (i.e., species diversity, functional diversity, and aboveground biomass).
DOI: 10.5061/dryad.15b00t8/1
title: Force_data

description: Force plate (1ch ~ 8ch) data
DOI: 10.5061/dryad.15b00t8/2
title: Angle_data

description: Angle of Joints (ankle, knee and hip) data
DOI: 10.5061/dryad.15b00t8/3
title: Breath_data

description: Breath (the distance between the abdominal markers) data
DOI: 10.5061/dryad.1615h/1
title: Matlab_code

description: Matlab codes used to generate all the numerical and statistical analysis carried out in the manuscript.
DOI: 10.5061/dryad.1s7v5/1
title: Simulations

description: The 100 simulations used to test the RDA-based genome scan method and compare it to pcadapt method.
DOI: 10.5061/dryad.20257/7
title: Supporting Information File 3

description: R scripts and input files
DOI: 10.5061/dryad.20257/8
title: Supporting Information File 4

description: Supplementary Figures
DOI: 10.5061/dryad.387c58v/32
title: RAxML, partitioned, exon-only data, 70% occupancy

description: Resulting phylogeny from the RAxML, partitioned, exon-only data, 70% occupancy analysis.
DOI: 10.5061/dryad.387c58v/36
title: RAxML, partitioned, exon-only data, 25% occupancy

description: Resulting phylogeny from the RAxML, partitioned, exon-only data, 25% occupancy analysis.
DOI: 10.5061/dryad.387c58v/37
title: MrBayes, partitioned, combined data, 70% occupancy

description: Nexus file for the MrBayes, partitioned, combined data, 70% occupancy analysis.
DOI: 10.5061/dryad.387c58v/38
title: MrBayes, partitioned, combined data, 70% occupancy

description: Resulting phylogeny from the MrBayes, partitioned, combined data, 70% occupancy analysis.
DOI: 10.5061/dryad.387c58v/39
title: MrBayes, partitioned, combined data, 50% occupancy

description: Nexus file for the MrBayes, partitioned, combined data, 50% occupancy analysis.
DOI: 10.5061/dryad.387c58v/40
title: MrBayes, partitioned, combined data, 50% occupancy

description: Resulting phylogeny from the MrBayes, partitioned, combined data, 50% occupancy analysis.
DOI: 10.5061/dryad.387c58v/41
title: MrBayes, partitioned, combined data, 25% occupancy

description: Nexus file for the MrBayes, partitioned, combined data, 25% occupancy analysis.
DOI: 10.5061/dryad.387c58v/42
title: MrBayes, partitioned, combined data, 25% occupancy

description: Resulting phylogeny from the MrBayes, partitioned, combined data, 25% occupancy analysis.
DOI: 10.5061/dryad.387c58v/43
title: MrBayes, partitioned, UCE-only data, 70% occupancy

description: Nexus file for the MrBayes, partitioned, UCE-only data, 70% occupancy analysis.
DOI: 10.5061/dryad.387c58v/44
title: MrBayes, partitioned, UCE-only data, 70% occupancy

description: Resulting phylogeny from the MrBayes, partitioned, UCE-only data, 70% occupancy analysis.
DOI: 10.5061/dryad.3p1k5d2/1
title: Data from: Legume Abundance Along Successional And Rainfall Gradients In Neotropical Forests

description: This database is the product of the 2ndFOR collaborative research network on secondary forests. 

The database contains total basal area data (in m2 ha-1) of legume trees (Leguminosae) for 1207 secondary forest plots differing in time since abandonment. The plots belong to different chonosequence studies. For a description of the database, see Gei et al. 2018. Legume Abundance Along Successional And Rainfall Gradients In Neotropical Forests. Nature Ecology and Evolution. The file "Legume basal area 2ndFOR data.csv" contains the following variables:
Chronosequence: name of the chronosequence site
Age: age of the plot (in years), "OG" indicates old-growth forest of unknown age
LBA: total basal area of legume trees (Leguminosae) of the plot in m2 ha-1
Reference: a citation for the chronosequence study, if available
PI/contact person: name(s) of the principal investigator(s) or contact person(s) for the chronosequence study.
DOI: 10.5061/dryad.425kd01/1
title: data_13-15_PRSB

description: csv file containing data for land cover and the standardized differences in pollinator visits, pest abundance, parasitism, fruit weight and fruit damage for strawberry plantings with an adjacent wildflower planting compared to controls. The data sheet also contains data on pest abundance in the wildflower planting in the last year of the study and data on the distance separating the wildflower and control plantings as well as the composition of the plantings in the final year of the study that were used as covariates in the analyses.
DOI: 10.5061/dryad.779k1h4/1
title: bank_vole_data
DOI: 10.5061/dryad.7hf2j/5
title: README
DOI: 10.5061/dryad.7pj51v0/48
title: "Long" cell-free DNA sequencing files - M5
DOI: 10.5061/dryad.7pj51v0/49
title: "Long" cell-free DNA sequencing files - M6
DOI: 10.5061/dryad.7pj51v0/50
title: "Long" cell-free DNA sequencing files - C1
DOI: 10.5061/dryad.7pj51v0/51
title: "Long" cell-free DNA sequencing files - C2
DOI: 10.5061/dryad.7pj51v0/52
title: "Long" cell-free DNA sequencing files - C3
DOI: 10.5061/dryad.7pj51v0/53
title: "Long" cell-free DNA sequencing files - P1
DOI: 10.5061/dryad.7pj51v0/54
title: "Long" cell-free DNA sequencing files - P2
DOI: 10.5061/dryad.7pj51v0/55
title: "Long" cell-free DNA sequencing files - M8
DOI: 10.5061/dryad.92961m4/1
title: Santema_Kempenaers_2018_JAE

description: year_ = year, 
box = box identity, 
nest = nest identity, 
ID_male = male identity, 
ID_female = female identity, 
transp_male = male transponder identity, 
transp_female = female transponder identity, 
firstEgg = date of first egg, 
hatchDate = date of hatching, 
fledgeDate = data of fledging, 
hatched = number of hatchlings, 
fledged = number of fledglings, 
died = number of hatchlings that died before fledging, 
survival = proportion of hatchlings that fledged, 
success = fledglings produced (0=no, 1=yes), 
successCat = nest success categorised, 
date = date, 
chickAge = chick age in days (hatching day = 0), 
rate_male  = number of nest visits by male, 
rate_female  = number of nest visits by female, 
rate_male_rel = relative nest visit rate of male, 
rate_female_rel = relative nest visit rate of female, 
maleStart = chick age of fist recorded male visit (can be &gt;0 if tagged after chicks hatched), 
femaleStart= chick age of fist recorded female visit (can be &gt;0 if tagged after chicks hatched), 
maleEnd = chick age of last recorded male visit , 
femaleEnd = chick age of fist recorded female visit , 
parentleft = one parent stopped visiting before the other parent and before the chicks reached fledging age (0=no, 1=yes), 
firstleaver = parent who stopped visiting nest first and before chick reached fledging age (1=male stopped visiting first, 2=female stopped visiting first, 0=no parent stopped visiting or both parents stopped visiting on same day), 
male_seen = male recorded again by SNB system after breeding attempt, 
female_seen = female recorded again by SNB system after breeding attempt, 
breedAgainMale = male breeding again in our population after breeding attempt, 
breedAgainFemale = female breeding again in our population after breeding attempt, 
age_male = male age (0=yearling, 1=adult), 
age_female = female age (0=yearling, 1=adult)
DOI: 10.5061/dryad.93kc5cb/1
title: Pong_Data

description: The file contains pong and reaching data for all the four groups.
DOI: 10.5061/dryad.c9g148r/1
title: Summary Data - Halvorson et al. Oikos 2018

description: Data presented in Halvorson, Fuller, Scott, Entrekin, and Evans-White, Oikos 2018, "Detrital nutrient content and leaf species differentially affect growth and nutritional regulation of detritivores", DOI 10.1111/oik.05201. Response variables are detritivore growth rates, consumption rates, and nitrogen and phosphorus-specific assimilation and gross growth efficiencies, across stoichiometry gradients of oak and maple detritus. See spreadsheet for further data description and main text for methods of data collection and analysis.
DOI: 10.5061/dryad.h8c3vq3/2
title: Gomar-Vercher: Metadata and Fastas

description: Metadata.txt:Information about sample collection source and sequencing data. FASTA files: Individual Fasta files for each sample included in the study.
DOI: 10.5061/dryad.n71684c/1
title: NHS England acute trust performance (data + python code)

description: We have provided data in csv format ('variables_yr_acute.csv').
This is data at the yearly time period for the acute and teaching trusts
 investigated in the study.
The full data set (for all trusts and at quarterly and yearly levels) is
available at:
https://eprints.soton.ac.uk/413163/
doi:10.5258/SOTON/D0218
DOI: 10.5061/dryad.nq7c845/1
title: Iglesias et al. 2018 DATA_JEB

description: Courtship song parameters and wing centroid size data of D. buzzatii and D. koepferae.
DOI: 10.5061/dryad.p5q4ph6/1
title: Supplementary material Appendix 1

description: Table A1- Data matrix of Lepidaploa taxa here analysed.
DOI: 10.5061/dryad.rn72k04/1
title: simulated_data

description: Data produced by the model described in the paper and used for statistical analyses.
DOI: 10.5061/dryad.rn72k04/2
title: nymphalidae_data

description: Butterfly data used for phylogenetic path analysis.
DOI: 10.5061/dryad.s1r15c6/1
title: artificial incubation and hatchling details

description: Includes thermal profiles of treatment groups, hatching phenology, and hatchling morphological data
DOI: 10.5061/dryad.s353f/1
title: ply file of Brindabellaspis ethmoid commissure
DOI: 10.5061/dryad.s353f/2
title: ply file of Brindabellaspis ethmoid commissure with nerves
DOI: 10.5061/dryad.s353f/3
title: 3D pdf of ethmoid commissure and nerves
DOI: 10.5061/dryad.v48k5p9/1
title: TI_HT_DP_Data

description: Data features:  - The original questionnaires that were sent to the English or French-speaking experts for each round of the Delphi procedure. It includes explanations about the research projects and the related concepts, and detailed results of the nominal groups.
- All the experts' answers and comments for each round of the Delphi procedure.
- A table of the scores for both rounds.For more detailed info on the files included, see "readme" file
DOI: 10.17632/phyysr82d5.1
title: Data for: The evaluation of preconditions affecting symptomatic human error in multi-engine civilian and air transport aircraft aviation accidents

description: These data include aviation accidents investigated by the National Transportation and Safety Board. The data have been codified to indicate reported causal factors using the Human Factors Analysis and Classification System. Included in these is the accident severity, flight segment and operating category. These data are binary coded data to enable conducting multiple variable logistic regression. Totals and pertinent percentages are included. The data were analyzed using Minitab 17 and the results are reported in the paper.
DOI: 10.17632/trtm5xgz55.1
title: Data for: Introducing Mass Parameters to Pseudo-Rigid-Body Models for Precisely Predicting Dynamics of Compliant Mechanisms

description: This data provides the dynamic response, from both time domain and frequency domain, of the PRB models and FEA models for CPGMs. The data shows the effects of the design and input parameters on the accuracy of dynamic performance of the PRB models. Specifically, the studied parameters include λ,A,and ω, where λ is defined as the mass ratio of the tip mass (mt) over the beam mass (mb), and A and ω are the magnitude and frequency of the input force of F=A sin⁡〖(2πωt)〗. The problem statement and modeling procedure of the PRB models are presented in She et al. [1], and the original raw data is provided as the supplemental material.
DOI: 10.5061/dryad.387c58v/45
title: MrBayes, partitioned, UCE-only data, 50% occupancy

description: Nexus file for the MrBayes, partitioned, UCE-only data, 50% occupancy analysis.
DOI: 10.5061/dryad.387c58v/46
title: MrBayes, partitioned, UCE-only data, 50% occupancy

description: Resulting phylogeny from the MrBayes, partitioned, UCE-only data, 50% occupancy analysis.
DOI: 10.5061/dryad.387c58v/47
title: MrBayes, partitioned, UCE-only data, 25% occupancy

description: Nexus file for the MrBayes, partitioned, UCE-only data, 25% occupancy analysis.
DOI: 10.5061/dryad.387c58v/48
title: MrBayes, partitioned, UCE-only data, 25% occupancy

description: Resulting phylogeny from the MrBayes, partitioned, UCE-only data, 25% occupancy analysis.
DOI: 10.5061/dryad.387c58v/49
title: MrBayes, partitioned, exon-only data, 70% occupancy

description: Nexus file for the MrBayes, partitioned, exon-only data, 70% occupancy analysis.
DOI: 10.5061/dryad.387c58v/50
title: MrBayes, partitioned, exon-only data, 70% occupancy

description: Resulting phylogeny from the MrBayes, partitioned, exon-only data, 70% occupancy analysis.
DOI: 10.5061/dryad.387c58v/51
title: MrBayes, partitioned, exon-only data, 50% occupancy

description: Nexus file for the MrBayes, partitioned, exon-only data, 50% occupancy analysis.
DOI: 10.5061/dryad.387c58v/52
title: MrBayes, partitioned, exon-only data, 50% occupancy

description: Resulting phylogeny from the MrBayes, partitioned, exon-only data, 50% occupancy analysis.
DOI: 10.5061/dryad.40877s4/1
title: File 1

description: Archive file 1 of 9.  All of the files need to be downloaded, then the data can be extracted via: cat uldb.tar.gza* | (tar -xz)
DOI: 10.5061/dryad.40877s4/2
title: File 2

description: File 2 of 9. All of the files need to be downloaded, then the data can be extracted via: cat uldb.tar.gza* | (tar -xz)
DOI: 10.5061/dryad.40877s4/3
title: File 3

description: File 3 of 9. All of the files need to be downloaded, then the data can be extracted via: cat uldb.tar.gza* | (tar -xz)
DOI: 10.5061/dryad.40877s4/4
title: File 4

description: File 4 of 9.  All of the files need to be downloaded, then the data can be extracted via: cat uldb.tar.gza* | (tar -xz)
DOI: 10.5061/dryad.40877s4/5
title: File 5

description: File 5 of 9.  All of the files need to be downloaded, then the data can be extracted via: cat uldb.tar.gza* | (tar -xz)
DOI: 10.5061/dryad.4bk56qr/1
title: Worker Ant CTmin

description: CTmin = critical thermal minimum in degrees Celsius; ColonyID = identity of the colony from which the individual worker ants were tested; habitat.designation = whether the habitat is "urban" or "rural"; longitude = the decimal degrees longitude of the collection site of the colony; latitude = the decimal degrees latitude of the collection site of the colony; treatment = the temperature treatment under which the colonies were reared in the laboratory, including 21, 23, 25, 27, or 29 degrees Celsius; city = the urbanization cline from which the colonies were obtained, including "Knx" (Knoxville, TN), "Cin" (Cincinnati, OH), "Cle" (Cleveland, OH)
DOI: 10.5061/dryad.4kn5j5d/1
title: Individual-based model

description: The code for run simulations based on the model presented in the paper.
DOI: 10.5061/dryad.4kn5j5d/2
title: input

description: An example of input data to run the ibm.f90 code.
DOI: 10.5061/dryad.4kn5j5d/3
title: SM_Costa-SysBio_2017_SysBio_review

description: Supplementary Material
DOI: 10.5061/dryad.6mv5372/1
title: Effects of landscape heterogeneity on the abundance of rice arthropods

description: Data were collected in three regions of the Philippines. Data contain the abundance of all functional groups and the abundance of the most common species as well as environmental data and landscape metrics. Metadata is provided within the excel file.
DOI: 10.5061/dryad.6r0p6s2/1
title: Primary Data

description: Primary data includes pedigree file from F1 to F9 generations, including cross type (wild, cultured), domestication index, and recovery data. Contact ajfinger@ucdavis.edu for any questions.
DOI: 10.5061/dryad.7kj7t1q/1
title: UCE probes for Platyhelminthes especially Diplostomoidea

description: fasta file with UCE probes
DOI: 10.5061/dryad.7pj51v0/56
title: README
DOI: 10.5061/dryad.94p44s4/1
title: Wildcat_telemetry_data

description: Radio tracking locations for all wildcat individuals
DOI: 10.5061/dryad.9p7d8h2/1
title: Nexus file of the chloroplast large sub-unit RNA gene (cp23S)

description: This nexus file contains an alignment of partial sequences of the cp23S gene (~ 600 bases) from new species of the endosymbiotic dinoflagellate genus Breviolum (formerly Symbiodinium Clade B) obtained from host colonies in the reef coral families Mussidae (sub-family Faviinae), Meandrinidae, Merulinidae, and Astrocoeniidae. Sequences from Breviolum minutum, B. psygmophilum, and B. 'muscatinei' were included for comparison.
DOI: 10.5061/dryad.9p7d8h2/2
title: Cytochrome oxidase 1 (Cox 1) gene for Caribbean reef corals

description: This nexus file contains cox 1 gene sequences from representative host samples obtained during the genetic analysis of their dinoflagellates endosymbionts. It includes sequences from animals in the families Mussidae (subfamily Faviinae), Meandrinidae, Astrocoeniidae, and Merulinidae (represented by Orbicella, formerly of the Montastraea annularis species complex).
DOI: 10.5061/dryad.9p7d8h2/3
title: Nexus file for the mitochondrial cob gene

description: This file contains aligned sequences of the mitochondrial cytochrome b (cob) gene (~ 900 bases) from species in the endosymbiotic dinoflagellate genus Breviolum (formerly Symbiodinium Clade B) obtained from host colonies of the reef coral families Mussidae (sub-family Faviinae), Meandrinidae, Merulinidae, and Astrocoeniidae. Representative sequences for Breviolum minutum, B. psygmophilum, and B. ‘muscatinei’ were included for comparison.